LOCUS       DAOKIP010000001       101201 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.001,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000001 DAOKIP010000000
VERSION     DAOKIP010000001.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 101201)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 101201)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..101201
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.001"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..764)
                     /locus_tag="QEL58_000001"
     CDS             complement(<1..764)
                     /locus_tag="QEL58_000001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674531.1"
                     /translation="MPPTSARIPHRFRRWRAAGYVLLGIYALYLLAGNVFLNTPLFDQ
                     VTNRKPHKFVMTTGPAITLLPGHVIAWNVHMRGHVNHTVYVLHAERASARLAVLPLFK
                     REVRVPRLHATGVSAEISRVEDAIPPPPRSDQGWTLRFDAIHSDSIRSARFGKLLIIG
                     KGQGTVGFLKQLRGGPSELFDSEVSFRDADTSFDGVQLLGDMNLTARFSYPRHYRDQA
                     PGLAKLKILHAQLDVDARSQGLRMDTDAQQPRISSAP"
     gene            898..1377
                     /locus_tag="QEL58_000002"
     CDS             898..1377
                     /locus_tag="QEL58_000002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008264748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDS1674532.1"
                     /translation="MEIRAATAGDFDAMWAIFRAAIATEDALPFAGTFEASTFQGHWF
                     GLQPAYVALLQDRVVGMYRMGANFPDLGAHVASATYVVDPTVQGRGIGRALVEHSLDR
                     ARAESFLAMQFNYVVSTNTPAVALYRKLGFAVVGTLPEAFRHRTLGLVDVFVMHRFL"
     gene            1398..2306
                     /locus_tag="QEL58_000003"
     CDS             1398..2306
                     /locus_tag="QEL58_000003"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674533.1"
                     /translation="MILRTSCVFALCTFMGACALQPKSMPPQVSSAGYTSVSSTLLAG
                     WIYLRSESYLPGSNLASGAPEIKVCESVAHRIQLEIYPGVEPDVERTCRNIDASATEA
                     ERWFPKRSTRYSVIIVPEGQSISVSRWSFGYRSAHLALAVAAFGNQERREGNLVDLVA
                     HETFHILGRIAGDARGQDEYHAYYAGLCAQLAVLGSIPESVLPGAPLQGGVDEPTRAS
                     SDSAYRVRREALLLSHDGSIKAGDDGGRSLALRCIELQKVTARPAKADVRPDFDWVPN
                     GATQTIHWLTPILPRASTPFTTACLL"
     gene            complement(2323..3249)
                     /locus_tag="QEL58_000004"
     CDS             complement(2323..3249)
                     /locus_tag="QEL58_000004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019336534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674534.1"
                     /translation="MPTDINDDGLDPTLLLKGLFPLPKFIRFVRERCPPGRFDEATLV
                     EEWRNARALVRRLHQDEADAADAMDALALPEEMQPLAEQALRQPSMHRMTSVVPRCWQ
                     MVEIDRLVVFQECINLRHIDQLAAATAASPDAREIMELVARSGRHAHPDVRFTQSDGS
                     YTFASASNDLRFLDVAAIDPRSIADYEPFGAASHALVIYLGFSDNLISATRIGRRIIL
                     TNGSHRLYLLRRLGFRHAPCLVTDASDSDLSDVLLPAAVKQDRQFYLGASRPPMFKDY
                     LDPRLTCTVPVTRKHYALRAKLDLQRITVPSL"
     gene            3441..3593
                     /locus_tag="QEL58_000005"
     CDS             3441..3593
                     /locus_tag="QEL58_000005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674535.1"
                     /translation="MNELIELGVVAGEQNHEDQGELIELGSVVSETKAHNHGTLWDGV
                     FPTTSP"
     gene            3677..4387
                     /locus_tag="QEL58_000006"
     CDS             3677..4387
                     /locus_tag="QEL58_000006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010485615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lasso peptide biosynthesis B2 protein"
                     /protein_id="HDS1674536.1"
                     /translation="MDQPEAPYFLSKHAHVCVTGDAMVILDQASGSYLSIDRRWAAGL
                     GGLVQDWPLASDGVPRPRMLQSLIDRRLITQDPLRGKSAASAAIALPRHWVREGESRG
                     CPPITARDVRRFLASVTRAACSRMFLPFSYTVSAARRRGQASTPGEVDLQQLALLVRV
                     FDWLRPIAFRKTDECFLYCLAMREFLGSYGIVPAWVFAVRTQPFAAHCWLQHGDRVLT
                     DIPFNLRRMTPILVLQPA"
     gene            4391..6232
                     /locus_tag="QEL58_000007"
     CDS             4391..6232
                     /locus_tag="QEL58_000007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019336537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine synthetase B family protein"
                     /protein_id="HDS1674537.1"
                     /translation="MYRYVAVFWNDHSESARAQALQAMERIEVGRPGIACVLKGSGGA
                     IYAQTDSPGYFEYSRSGPLVVLGKLFHKVFGADTVPAQAVPDAAAGTTACSTQGRSLV
                     EQYWGRYVALGYQPDTASWFVLRDPTAEIPCYMTTADQLTVVFSNMEDCLLLGLGDFN
                     VDWSFLSYSLLFPFRDGLQTGFEEVVALEAGEAVTIRDGQPVGRHYQWDVVRQASEAP
                     IEDLEEAVQLARATLLGCIGALASQHRCIQLQLSGGLDSSIVLAGLLHAPSAPEVKCV
                     HHYDAGIGADERMFARMAIAGARESSGRSCEFVEYQRQPHCSLEEIMDFPRTARPAHC
                     SGYLLHRRDVDFDADTVQFTGVGGDAVFLRFKGNAAAIDYAWRRGIDRDFFRVAFETA
                     QSGDSLYGVFKDAFVHGVLKRPGSINGRWGNPCEWVKVDASEQDGTPPAWLRHARAQG
                     HRLSPHKLAHIGRMIFPTSVLDPFEGAGRWHGVSPLSAQPVVELFARLPLHLLMAGAE
                     DRTIARRALQGLLPQALLSRKVKCYLDDHSVAVTQRHQQFIRGLLVDGLLARRGYIDS
                     ASADAGIRRVSPDHSSQVLGIFGPQVNIEAWLRRWMGRPGAPAVGVA"
     gene            complement(6229..6939)
                     /locus_tag="QEL58_000008"
     CDS             complement(6229..6939)
                     /locus_tag="QEL58_000008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010485620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HDS1674538.1"
                     /translation="MLTATHLVKEHGTHLALDDVSFTVRPGEIFCLLGANGAGKSTTI
                     KLFLGFLEPTSGSAEVDGLSAWQRPQQVRRRLLYIPENVALYDELTGYENLDYFARLA
                     AVEQRSPARLKDALRSAGLAPEAFGRRVGFYSKGMRQKVGIALAIIKEAGALLLDEPT
                     SGLDPTASAEFHELIVRQRDRGTAILMATHDLFRAREVATTIGLMQAGRLRRTLDAST
                     ITANDLESLYLEEMSRSA"
     gene            complement(6952..8310)
                     /locus_tag="QEL58_000009"
     CDS             complement(6952..8310)
                     /locus_tag="QEL58_000009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019336539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HDS1674539.1"
                     /translation="MSSLSIAGHEIRRLLRDRALPVLLGLLVVLAAYAAWNGSAWVGQ
                     REAAIGLIHAEEQDARERSRGFVGKAPSVLPRVQPVLPPAPMAALSIGQAEAYPYTAD
                     VVALGDRTQLLRHVWSDIGNPAVQAAGRFDLAFVVVFLLPLVILAATFDLWSRERERG
                     ITALVLSQPIAAGRLIAVKASARGAIVLLPALAIVVAVAAGSGATSPSGLAVLALIVL
                     AYGSFWLALAVLIGCFARRTTEAAIAAGALWLLIVVMAPSLVLAAVNLMVPPPSQMQL
                     ATALKAQLADTARQQQLRHAAEPPATRSPAPRIADAVRVAYADLVQADQVIAPLIAAH
                     AEAEDARRQSLDRVRLLLPSVAVQDALDRLAGSDADRALAFQQQVLAYWQARRQLHKD
                     YLDRDMPQTLAEYDALPLFEFQETAGALQRGVLIDLAALAVATLLLLIAAGLLRRRLG
                     TP"
     gene            complement(8307..9770)
                     /locus_tag="QEL58_000010"
     CDS             complement(8307..9770)
                     /locus_tag="QEL58_000010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010485625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3526 domain-containing protein"
                     /protein_id="HDS1674540.1"
                     /translation="MSDASPAFSRSASALRQTLTVAATQLKLMWRERRLLWLALTLLL
                     LAGASVTTGAARLAQQAQERQIVAEQEARLWDSQGMIDPHAAAHVGRAIPAPVRPLAA
                     LDPGISDFVGTSVFIEGHAQNPARHRPIDAGAALSRFDGFSAAWTLQVVAPLLIILAG
                     FGSLSGDVARETLRQELGSGASAHVLIGGRLIALATASLLLVLALLAVSLPGMGGHLL
                     GTADIIALVAMVAAYALYLLVFCAITIGVSARFSAARTSLVVLLGFWVVTTLLAPRMA
                     PALAESLDPTPTSPAFRAAVTEDAENGADGHDPADKRLDALRAEMLARYQVSDVDDLP
                     VNFRGVALEFAEANSSETYNRHFERIYTAYQRQETTQRAFAALSPTLALQAASRALAR
                     TDFPAHLAFLRGVEDYRYRLIQALNLEVKQHKAVNGSKHLADIATLTRSVVYSPRKPS
                     LGQIAAAQSVNVAILLAWVLLALGVVLTSARHLGSAP"
     gene            complement(9780..12164)
                     /locus_tag="QEL58_000011"
     CDS             complement(9780..12164)
                     /locus_tag="QEL58_000011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010485627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDS1674541.1"
                     /translation="MNNASTARPAALVVASLAAALQLNAPAMAQDAGAPASPTQGHRR
                     SDTATLDKVMVIGSNIRDAIGGGASPVIVIDREAIDRSGVPSLQQLFEKLPQNFGGGA
                     NGANVGNLGVDRDTGNNFGQGTAINLRGLGTGTTLTLINGHRVTSSNRYQYVDISLIP
                     LSAIERVEILTDGASAIYGTDAVGGVVNIVLRRDFTGYETSLRYGSVTRGNMDEYQAS
                     QSAGWSWEGGHMMASYEFLKQANLAAVDKDFSRNVTVRPYDIYPGSKRHSLYLDGEQE
                     LSDVLTLNLTGSFARREMDTTISGTADETRLFPHTRQFDVFAGLTLELPRQWQARLNS
                     GFGRSDVSYERTTISGSSVSTAPPTDTNSESRYLEVIADGELFNLPAGGVRAAFGAGY
                     RRDGYELLDHRGLEKPLDLQRTIRSAFAELNVPLLADTPGVRRLSLTAAARYDDYSDF
                     GSTLNPKLGLLWKATEGLSFRTSYGRSYRAPVYQDMQLNNTAVVAKVPNPSAASGSTV
                     LMMLSNGNPDLGPERAKTWTGGFSFAPPSLPGFKVDANYYHIEYADRIGSGFGGSFPS
                     LFLQSTAPYADLLTVNPTPQQIQQARQLGASGLGLFVSRAGPYALAPGTDETSSEVIL
                     DNRFRNNAFTSQRGVDFNASYDFDAGQTRFALNLAGQYIIDSKRRVTATSPEVDAVNT
                     VYFPVDLKVRGGLAMSHRQVAGGLFVNYVDSYRDPANRADPHVSSWTTVDLNLKYDFS
                     DSAGAGQGTSLSFNVQNLFDRNPPFIVNSINTGFDPTNATALGRFLSMTLTHRW"
     gene            12337..14007
                     /locus_tag="QEL58_000012"
     CDS             12337..14007
                     /locus_tag="QEL58_000012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012511107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDS1674542.1"
                     /translation="MRTFALPPPVTEILAAYWKADRRLLLLIAASVVLSSLATVAAPY
                     LFSRLIDRISAEDLRELAAWFLLYAVMLGAASILQNTVQYLSFLSGENLGFITSTRYF
                     ARLLKKTHSFFLDYNAAELQVAGEKGRNALKIVVQLGLVVFIPSALQILLTLVTLGAL
                     INLQVVVIVLGYGSVAITLSAIATRRARIHRESAVEAGQQNARFVGNAMNAMETLRQF
                     GGSTWMIQRFEQKAQEVRDSWRAYVLQRIGFIALLGICLAVEFIVTFALLLPRYQSGH
                     LSVGDIVLFNLLLLQLNMPFEMIARSIDDVARSWTLLTPLSALWAAPEERQAENAGRF
                     HGECGQIEFQHVSHRYGNGRGVHDASFHAGRGGINFLMGETGAGKSTLFKLALKSIEP
                     QAGRILIDGTDLAQIERAAWHAAVAVVPQDVILLNESLADNILLGRPRDDARLRLATH
                     RASILALIDALPEGFETTVGERGLKLSGGERQRIAIARALYGDPAILLLDEASSALDE
                     ATEREIIAYIRELAKEVTVLAITHRWSVVTAADQVIDLVGDRNQTSSC"
     gene            complement(14138..14890)
                     /locus_tag="QEL58_000013"
     CDS             complement(14138..14890)
                     /locus_tag="QEL58_000013"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674543.1"
                     /translation="MSSKIKNSDAALTRQLKVKLLTPKSLKEFSDCLNDVLQSAAAGN
                     HPILHIEAHGDENGLQLTNDDLIDWPDLSVPLAKINDMMRGWLVVTVAACSGGHMART
                     VLNTARAPFFALVGPPEEIEEDVLLNDYTEFYIEFCKTRSLTKAMWALNSFGASKRNY
                     FFTTHRSCFVQLFEERITEKISSMERSQRIARLASTLVAASATPEEISAAHHTATKVV
                     DNPTESAFRAWRQFVFADKYPENLDLFPFPFP"
     gene            15764..15982
                     /locus_tag="QEL58_000014"
     CDS             15764..15982
                     /locus_tag="QEL58_000014"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674544.1"
                     /translation="MMEAARSAPSIDSSRNVRNRDGGIRHHPATVVNLRDIVSQRKQR
                     SAVAMAGPDAEPPAAVLPVPGPNRRQRV"
     gene            complement(16007..16486)
                     /locus_tag="QEL58_000015"
     CDS             complement(16007..16486)
                     /locus_tag="QEL58_000015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674545.1"
                     /translation="MQDVVSELSGTQYSKLHLAHAHFDAACKAFLSGDHPAVVITLAG
                     VAEEIYGAALLQGYSVVGDHSTPRFLDEIIRFGAEKGDPRTVKQIKEFLYEAKNGVKH
                     ARDIKEMVPIEPAHVWNLLLGAMLNRDRIGLEIQGDAKEVARRIASSLGRLDDLDRV"
     gene            complement(16659..17144)
                     /locus_tag="QEL58_000016"
     CDS             complement(16659..17144)
                     /locus_tag="QEL58_000016"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674546.1"
                     /translation="MPKSPNDLGGVVAANSSGDPADEYAYLWDGSDPGWTLNHTRWHS
                     AELALVFAPSGPSIKEIVALRSALATYAARSAAEILSELRGCERVALGTHPAFEARGI
                     ADRCRGVGLAVEWVARDVSRYVLSNNVTGSWLIIEDNEFARSVYDRAMREGIRVVHTD
                     A"
     gene            complement(17125..17361)
                     /locus_tag="QEL58_000017"
     CDS             complement(17125..17361)
                     /locus_tag="QEL58_000017"
                     /inference="COORDINATES: protein motif:HMM:NF013522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tautomerase family protein"
                     /protein_id="HDS1674547.1"
                     /translation="MPHVAIKLYAGKSEEEKQRIADAMTQALKDAIGSTAESVSVSIE
                     DVQPSAWMGEVFEKNIVRNKHLLYKRPGYAEIPE"
     gene            17637..18010
                     /locus_tag="QEL58_000018"
                     /pseudo
     CDS             17637..18010
                     /locus_tag="QEL58_000018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005413452.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
     gene            complement(18096..18812)
                     /locus_tag="QEL58_000019"
     CDS             complement(18096..18812)
                     /locus_tag="QEL58_000019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010485763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674548.1"
                     /translation="MDRTQKTLTMADVAGWGSALVTFGLVQGALYLKAYWGHFGLDPF
                     QFVAVSELALAGLAGIGAVLFFMLVTALLGGWIEGRVTANTTVPSPVMWLILVLCLAG
                     LGAIIWWSNGWPLLMGGALVGVCAVAVRLSPVLPAAVKDSPWLIYALIMLVYVSISSI
                     WIGSERARVITTGGSSYTVSVTVDGKMQGGVSLVGRLGDSYVLWDPAQRLAVLVPVDD
                     VGRLEIGRKTVPPAKAKQSP"
     gene            19393..19749
                     /locus_tag="QEL58_000020"
     CDS             19393..19749
                     /locus_tag="QEL58_000020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005413459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674549.1"
                     /translation="MTKRYSPAPQPIQEEPANGPVLDRNTLIALLHSIGSGATSDGQP
                     WPERHLMPGRRIALADTDCSLAGLRVVMEILLAAQRARENGELEQDVGPRIMEGLIMA
                     GLGLTAHASTRVRPEG"
     gene            19750..20220
                     /locus_tag="QEL58_000021"
     CDS             19750..20220
                     /locus_tag="QEL58_000021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019336586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674550.1"
                     /translation="MTWCSWAATALCVGFVIAAQARWFEPPVPSPIAFQRVSNDRFSQ
                     LRRQAMQFVDGRPGHGFQFVERHEDASFQIHCKGVPVLWLGRRPQHVLLQVSLDANQR
                     APAVLSLRALLQWQLEPVDYLEQVLAGVPEPVLMDRVLLMLAGGVPDGVRCGMP"
     gene            complement(20238..20978)
                     /locus_tag="QEL58_000022"
     CDS             complement(20238..20978)
                     /locus_tag="QEL58_000022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010485743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674551.1"
                     /translation="MDMQAGGGLDSPAKTDSQELTFHWLYQRVQGLVEHSIYPKAGRV
                     ETWAFRVGLLAALVGVLSSQLPERWVAVTFTSPLVTVCLVVEVASFIVAGVFAARRGI
                     RQFSQPRLSHAQEMDSEFAQWQAVIGDLRCFPKVERERRLKFVSTLRTNMIERMGMMY
                     GGLQRLGPFPLLIALYLQFRGWKWGDWASAFDVSLLGALLIFGMVLLYVVGWMLIGLR
                     TRLDTYVALLEGSIHEPEPPQPAQPAPQ"
     gene            complement(21040..22137)
                     /locus_tag="QEL58_000023"
     CDS             complement(21040..22137)
                     /locus_tag="QEL58_000023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008267483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674552.1"
                     /translation="MKAVPIIIAAALAAPSLDARAASEDRNTAPHFDFGGAVRFNYGW
                     LDYGPTSRLQLELLRADIDAGSGPFFFSAQYRWYDGFDAIHHAYAGWQFTDATQLKAG
                     VQQVPFGLLPTVSQSFWFGSGYYLGIEDDYDPGVVVIHQAGKTTWHLGWFSGDEYGTG
                     ARYDRYSFDVAQTDALPYRERQRFNVRVEQSRDWAGGELLLGASAFAGKVQNTRSRRH
                     HDHQAAAVHAQWKRDGWTTQLQWARYRYNVPGERIALSAFQAPFEIAAEADVPSANVA
                     YSFGPRGWLDDVTCYNNLSMTRPVGHSSGVRDSWQNVTGCSLQKGVMLTYVDWIAGRN
                     MWFAGGDGIGINNGGPSRWHSRLNLNIGFYF"
     gene            complement(22278..22754)
                     /locus_tag="QEL58_000024"
     CDS             complement(22278..22754)
                     /locus_tag="QEL58_000024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012511064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HDS1674553.1"
                     /translation="MSTEAPRPPLPPFTLESAIEKVRLAEDGWNSRDADKVALAYSLD
                     TRWRNRAEFTHGREEARQFLARKWKKELDYRLIKELWAFSGNRIAVRYAYEWHDDSGN
                     WFRSYGNENWEFGADGLMEHRFSSINDMPIKESERKFHWPLGRRPDDHPGLSDLGM"
     gene            complement(22816..23385)
                     /locus_tag="QEL58_000025"
     CDS             complement(22816..23385)
                     /locus_tag="QEL58_000025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR family transcriptional regulator"
                     /protein_id="HDS1674554.1"
                     /translation="MHKTSTDTAQKILATAEALIYQNGIHATGMDLLVKTSGVARKSI
                     YRHFENKDQVAAAALNARDVRWLDWFQQECDKADSPEARILGMFTVLKGWFESEGYRG
                     CAFINTAGEVGDPDDPIRHIAKHHKQKLLDYTLELTTQLDIEQPVALARQLLVLMEGA
                     ITVSRVMGDYNAADTARDVAEVLLEQARR"
     gene            23554..24507
                     /locus_tag="QEL58_000026"
     CDS             23554..24507
                     /locus_tag="QEL58_000026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010485737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDS1674555.1"
                     /translation="MNTFARTLAVATLALSVQAGLSAQAAEPAKPAAITSVARTASYI
                     TTADGVQLYYKDWGPKDGPVVTFSHGWPLNSDSWESQMIFLANHGYRVIAHDRRGHGR
                     SSQPWDGNDMDHYADDLATVINTLDLHDVTLVGFSTGGGEVARYIGRHGTGRVKKAVL
                     ISSVPPFMLKTADNPNGLPIEVFDGIRKAQMDNRAQLYKDIPSGPFYGFNRPGAKVSQ
                     GLIDAWWAQGMQGGHKNTYDSIAAFSATDFRADLKKFDVPTLVIHGDDDQIVPIDISG
                     RQSAKLIRNARLIVYPGAPHGLTDTHKDRVNQDLLTFLQEK"
     gene            complement(24552..25181)
                     /locus_tag="QEL58_000027"
     CDS             complement(24552..25181)
                     /locus_tag="QEL58_000027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation transporter"
                     /protein_id="HDS1674556.1"
                     /translation="MDHCCGHKRRDLEALALHSAQRRVLVAVLIINLAMFLIEFGAGI
                     VARSSALQADAVDMLGDAIVYGLSLWAVNRGARWEAGAALAKGVLILGFFVFIVLEVI
                     AKLANGVPPSSGVMLGFGAIALAANLVCLALLWRFRTLNINMKSTFACSRNDVAANIG
                     VLVAAGGVALTGRGWPDIVVGVVIALLFLKSAVGVISEAWPAWRAAAKA"
     gene            25267..25677
                     /locus_tag="QEL58_000028"
     CDS             25267..25677
                     /locus_tag="QEL58_000028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDS1674557.1"
                     /translation="MPAHLTIGQLARQTGTKAETIRYYEKIGLLQPPLRSDGNYRYYS
                     AQDQRRLSFVRRARELGFSIEQIRELIAFGEQREHECSSVDDVVKAHIADIARRIRDL
                     QALQGELQRMIGNCPGGRVADCRVLEALQPKAAA"
     gene            25750..27726
                     /locus_tag="QEL58_000029"
     CDS             25750..27726
                     /locus_tag="QEL58_000029"
                     /inference="COORDINATES: protein
                     motif:HMM:NF012801.1,HMM:NF019335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDS1674558.1"
                     /translation="MTLFPHPLALALSAALLSAAASASAHEPPAAHDDHHDDAVELDA
                     VVVQSTRSGRRVSDEPIRVDVVSQEEIEEKLLMSPGNVSMLVAETAGVRVQNTSPGMG
                     ASNIRIQGMRGRYTQLLADGLPLYGGQSSSIGLLQIPPTDLGSVEIIKGSASALYGPA
                     ALGGVVNLISRRPKETAEAEMLLNATSRGGQDVTGYAAGPLAEHWGLSVVGGYHRQDR
                     QDLDGDGWADIPGYERATVRPRLFWESDDGARALLTAGAMRESRLGGTLPGQRAPDGQ
                     PFALTQRTKRVDAGAVVDVPVRESDHLQLRASAMSTDHDHGYGPEQDNDTHQTGFAEV
                     SYASGAGATSWLAGIAAQQDRFRSARYPQFDYRYTVPALFVQAEQALRDDLTLSGSAR
                     WDQHSAYGGHFSPRVSLLFRPDAWTLRASIGRGFYAPTPFVEQIEAAGLSRLEPLSGL
                     RTEIATTGSIDAGYVQGPWELNLSVFASDIDHAVRLVESATAPGERVQLINVAGVTRT
                     RGSELLLRYRWQDVTVTGSYVYTDAREPGAEGAGRRPVSLTPRHSAGLVAMWEQHDRG
                     RVGLEAYYTGIQALDDNPWRRRSRPYLEVGALGEIVLGRISLFLNLENILNVRQTDYN
                     RMLRPRRADDGQWTVDAWAPLEGFVVNGGVRMKF"
     gene            complement(27977..28774)
                     /locus_tag="QEL58_000030"
     CDS             complement(27977..28774)
                     /locus_tag="QEL58_000030"
                     /inference="COORDINATES: protein motif:HMM:NF018352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MipA/OmpV family protein"
                     /protein_id="HDS1674559.1"
                     /translation="MIKFLCPVLACSLSFAALAQEGPGGGPDDQGPPRWGLGLAAVVT
                     DSPYAGEGTRVMPIPLVSYHGERFYFEGLGAGWVLLKNDSFELAAVAKGRMDGFAVKD
                     LGRSELARNGLDYRLLDDRDMGLDLGAKVKWSGRGGELEAELLADATDTSGGQEFSLQ
                     YGYGFDLGKGRLTPNAGVTWQSKDMANYYYGTLKEEVARGVVDYKPGAVTIPHVGVSY
                     FRPLGEKWMLMGFAQYKFLPDKITDSPLIERDTSGSATLFIGLSRGF"
     gene            complement(28921..30243)
                     /locus_tag="QEL58_000031"
     CDS             complement(28921..30243)
                     /locus_tag="QEL58_000031"
                     /inference="COORDINATES: protein motif:HMM:NF014567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing histidine kinase"
                     /protein_id="HDS1674560.1"
                     /translation="MNSPPRLRGVHWWTSVALILLGLLVLLAIAVQSFSGQLLMEDRY
                     WEDLTRAISDDHAERVRSGHEDALPSEGLVRSWYLREGVVPSGLPRQLAHLPPGIYTS
                     EASLFGDAVNLDSGETFHAVVAGLPQGRLVTVVNIEPLEQQQNHYARLSLLWILCFAA
                     VIGGFIVWLHANLVRPVRDLAARMQAIDPSDAGARLPTDYPREEIQVIAQASNAHLER
                     VAQFIQRERSLLDQASHEFRTPIAVIAGAADVLRQLPLPAASQPALVRIEYAVEDLSE
                     TMVALLYLAREAGPGVEDAEITALHDFLPRLVLDHEYLLRGKDAQLRLGALEPTFVAA
                     PEAMVRIAVSNLIRNAIENTDVGFVEIVLSQGRVAVIDSGSGFDPVEAARRYRDSLRQ
                     PAPIRGQGLGLFLIGRICERFRWTLGIDSGTRGTRATLDVSASVVEVP"
     gene            complement(30236..30916)
                     /locus_tag="QEL58_000032"
     CDS             complement(30236..30916)
                     /locus_tag="QEL58_000032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003484375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDS1674561.1"
                     /translation="MSILIIEDNAQLAANLYDFLEACGHTLDAAPDGLSGLHLASSKD
                     YDAIVLDWNLPRLDGLTVLRRLRGEAKKHVPVIMLTARDQVADKIDGFEAGLDDYLVK
                     PVALPEIEVRLRSLVARRRHAGATDNVLRVGDLAFDLGTLQAHRAGRKISLTRTGRRL
                     LELLMRESPQVVTRAKLERVAWGEVAPGTDLLRSHMYVLRRALEQNEEAPLLHTVAGS
                     GYRLSPGE"
     gene            complement(30928..31902)
                     /locus_tag="QEL58_000033"
     CDS             complement(30928..31902)
                     /locus_tag="QEL58_000033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012437817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartyl/asparaginyl beta-hydroxylase
                     domain-containing protein"
                     /protein_id="HDS1674562.1"
                     /translation="MVMAGMLIYISACILYVYRFRGQQRYQGFSQYLRKSWPVFAPLN
                     CLLYMATAREARQPVLKPHYIEGIERLRRNWRRIRDEAMELHASGAFEAASAPGSAGH
                     HDLGFRTFYKRGWRKFYLKWYADPHRSAERLCPATVRLLEGIPGIRAAMFSVLPAGAE
                     LSMHSDPLACSLRYHLGLDTPGTADCYICVDGHFITWRNGGDFVFDETYPHFARNDST
                     TNRVILMCDVERPMNLLGRAFNRLYARLAWAMTVPNTPEDRQGPISWLFARLAPLREV
                     GVALKHRHRLVYTLLKYLLNAGLLLLLFAAIIGVIGFLLRLFGLLGMS"
     gene            complement(31914..34964)
                     /locus_tag="QEL58_000034"
     CDS             complement(31914..34964)
                     /locus_tag="QEL58_000034"
                     /inference="COORDINATES: protein motif:HMM:NF013069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HDS1674563.1"
                     /translation="MTLLFVALALVGAFGFAAMKVQNFPDIDFPIITITATLPGASPA
                     QLENDVARRIEDALANRQGIKHIKTTLADSVATISAEFHIGKPVQEAMDDVRDAVAGV
                     RADLPAELRDPFIQKAELASQPVVTYALSSTTLDMQALSWFVDNQVSKRLLGKAGVGA
                     VSRVGGVDREIRVALSPGRLLALNATAADVSHQLRQLQLEASGGRVALGRAEMSVRTV
                     ATVDSAERIADMNLTLTDGRRIRLGEVAEVSDTVAEPRTAALMDGRPAVSFNVLRSRG
                     ASELEVARAAQSVIADLQESYPQIHFEQAVDYAGPVAENYRGSMMLLLEGAVLAVVVV
                     LSFLRNWRATFIAAIALPLSAVPTFAVMHLMGFSLNTVSLLSLSLVVGVLVDDAIVEI
                     ENIERHLLMGKTPLRAAGEAANEIGMAVIATTLTLVAVFLPTSLMGGVVGQYFLQFGW
                     TAAVAVLFSLLVARMLTPTMAAFLLRAPAKRHKEPRWVLRYLQWVRACMHRPVLTLAS
                     AVAMVALGMLVAAQLPGEFMPPDDGNQVQISLALPPGSTLVDTLGLAESAREIAARSP
                     MVASVHTSIGGGSGGSGDPGEAAPTASVATAVLTANLVARSERNGLTRSIIEGQLRTE
                     LRQLAGARVSVGSDSEGLELVLSADDGDRLVDHARLVERELRGIPGIGAVVSSAALVR
                     PELVVRPDFARAADLGVTSRAIADTLRVATLGDYVQDLAKLNLSERQVPVVVRLADSG
                     RNDLETLRRLPVPGVRGPVPLESVADLALLSGPAELTRYDRQRNISLKVALNGLPLGD
                     VERAAMALPSLSRLPHGITMAPAGDAEAMSELLAGFGMAMAAGVMCVYMVLVLLLKDF
                     AQPLTVLVALCLSIPGAFVALLLTGQSLSMPSMIGLIMLMGITTKNAILLVDYIVIAR
                     RELGMNRRRAVVDACRKRVRPIVMTTIAMGAGMLPVALGLGADPSFRAPMAIVVIGGL
                     LTSTVLCLLIIPVAYCAMDDLVGGLRRRTRPVVAGTAGSLGVSA"
     gene            complement(35006..36124)
                     /locus_tag="QEL58_000035"
     CDS             complement(35006..36124)
                     /locus_tag="QEL58_000035"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HDS1674564.1"
                     /translation="MKRNRFALATGLCLAAATVAIAWVRIAEDDAAPVPAPAPVISVH
                     LVRPLHTPLQVHAPATGSVAAWEEASIGAEANGLRLTDVKVNVGDTVQRGQLLASFNP
                     GLIEAELGEAAAAVALAAAESSQAAANLQRAQVLDASGAIARQQLNQYQATALTTRAR
                     LDSARAVVQRARLRLLQTRVLAPSDGIISARTATVGAVVPAGQELFRLIRDGRLEWRA
                     VVASADLLAMRPGQTVNISIPGAGSLEGRVRALGPVIDVATRSGLVYVDLPAGAPLRA
                     GAFVQGYIAVGEEGMFTLPQAAVLLRDGFNYVMQVGQDGRVLTRRVEVGRRSADRVEV
                     VSGLEPSDAVVASGLGFLNDGDFVRVISVPASGKASHS"
     gene            36506..37459
                     /locus_tag="QEL58_000036"
     CDS             36506..37459
                     /locus_tag="QEL58_000036"
                     /inference="COORDINATES: protein motif:HMM:NF013890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674565.1"
                     /translation="MCALSEVSALLSRLQGQVRVEDPVVRYLGALFAELAYYHVPEAE
                     LDDSKRALLIPCESYQDLVQSGSRPNVLKLVNQVEIPESDTFIVTSPGVIVVGVRVHR
                     TLFLGFRGTQFLFDWSINLRSSRVSLSRWAGRSDRFHEGFAMEAIRISQQIDGKLFEM
                     GRGSFDNVVFSGHSLGGAVAAISALILEWPRSAVCLMGAPRYCNLSALASGYRQLPMQ
                     VRRAGDGVPTVPPRFLGYADHLRQISTDGSAYSEPDHFSGLFGGFVRWAAFLVSGAKS
                     HSVESYRKEMGRAAGAAKAESDLTWHPRLTNAHVRKSKSAP"
     gene            complement(37892..39373)
                     /locus_tag="QEL58_000037"
     CDS             complement(37892..39373)
                     /locus_tag="QEL58_000037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005413324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin"
                     /protein_id="HDS1674566.1"
                     /translation="MNSLKRAALGAAAGGCLLLASPSVLASASDTEAGLRAQVQQQAK
                     QLRDQASLLEQLSARLAALEGASQSTSVAPGSDAGLDAQVAAAIADTRQDDMTILQAQ
                     VAQLAATGGGGDGNLRWRKGGPEFRSSDGQFTFHPRGRVMVDFSSTHGSAFDARNITG
                     TDLASGRLGAEGRMGPLGYKIDADFAGNDVSLKDTYLSWDTRLGGLPTEIYVGNKLKD
                     RGIDGGTSGVNTPFMQRNAVASVGAQQSGYYGLGVTTKVIGDGWHASVAVTGDDIGND
                     STASDTIAYLLRAHWNPLRGQAGFVHLGGWYWYEDLGQDVGSINKTSPIALGWNGNVR
                     VSASSIANVTDNRAWGLELGGVYGPVWAFAEHTTRTIESRTVDSVDQRATSVYAGWLI
                     TGERPGFSSRSGVWGTTRVLRPVQEGGVGAFELAARYDRYDFLDAARGGEGTAWTLGV
                     NWYLNNWSRLMLNYVHWKTDNKVGNAQGPDSGNTVGVRAQVSF"
     gene            complement(39406..40446)
                     /locus_tag="QEL58_000038"
     CDS             complement(39406..40446)
                     /locus_tag="QEL58_000038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005413325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDS1674567.1"
                     /translation="MSLHVGKLRGLAVLLFLLNPLLAGAVPAAPPASAPEVIPLWPQD
                     HWQQRARGPERIGAEGSAKGAVSGVSNARMEIYRPLKPNGTAVVIFGGGGYFRIQIGS
                     AAKPTAQWLQSLGVTAAVVYYRLPADGWAPVSPFQDGQRAMRLLRAQAASLGVDPERI
                     GALGFSAGGNLAGIVATRFDAPLYPLVDAADQLSARPDFLGMIYPVVSMRPPLDHTRS
                     KRELASQNDAQQAYSVEQHVRKDMPPVFLAQAVDDRTVDVGHSVAMYQATHAAGIPVE
                     LHLFEAGGHSWGLGKPGTLVAQWPRLFANWARSHGYLGPPPVRLPPHDASAIPAAAAQ
                     PPRSLDDDGAGD"
     gene            complement(40727..43375)
                     /locus_tag="QEL58_000039"
     CDS             complement(40727..43375)
                     /locus_tag="QEL58_000039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HDS1674568.1"
                     /translation="MSNTPFGESSCAAAASGCVEVRGAREHNLKNVDVSIPRNALVVF
                     SGVSGSGKSSLAFGTVFAEAQRRYFESVAPYARRLIDQVGVPDVDAIDGLPPAVALQQ
                     QRGASNARSSVGSVTTLSSLVRMMYSRAGTYPAHQPMLYAEDFSPNMPQGACSTCHGL
                     GHVYEVTEALMVPDPSLTIRERAIASWPPAWHGQNLRDILVTLGYDIDVPWKKLPKKD
                     RDWILFTEEAPSVPVYAGFTPAETRAALKRKLEPSYMGTYTGARRYVLHTFANTQSAL
                     MRKRVSRYMEGKLCPACHGKRLKPEALSVTFAGVDIGEFMRLPLDQLADLLEPVAQGD
                     FSAHSKGARTRRSATPRDRARRAASGQATHAGAPDVRLTSALSEEKRLAAQRLAGGVM
                     ARVRQLRELGLGYLSLDRATPTLSAGELQRLRLATQLSSLLFGVLYVLDEPSAGLHPA
                     DSQALYDALDRLRDGGNSVFVVEHDLELMRRAQWLVDVGPEAGEHGGRVLYSGEPDGL
                     RHVQDSRTARYLFDQVPAPASRQRSAGNWLQLQGIHRHNLQGVDAQVPLGLLTAVTGI
                     SGSGKSSLMAQALPELMLLHLGHEPVDEGADSEPTDGPSVIEATRGRLAGDVDAIQRV
                     VQVDQKPIGRTPRSNLATYTGLFDHVRKLFAATPAARRRRFDAGRFSFNVAKGRCETC
                     EGEGFVSVELLFMPSVYAPCPTCHGARYNEATLKVQWNDRNIAEVLQMTVDQARAFFS
                     EEDAIARPLQLLQEIGLGYLRLGQPATELSGGEAQRIKLATELQRSQRGRTLYVLDEP
                     TTGLHASDADRLLVQLQRLVDAGNTVVMIEHDMRAVAQADWVIDVGPGAGGAGGTIVA
                     KGTPQQVARAKGSRTAPFLARELAPL"
     gene            complement(43481..45364)
                     /locus_tag="QEL58_000040"
     CDS             complement(43481..45364)
                     /locus_tag="QEL58_000040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY domain-containing protein"
                     /protein_id="HDS1674569.1"
                     /translation="MKAGFRQSMSWLHTWCGLTCGWLLCAIFLTGTLSVFREPITRWM
                     EAGPVPASPQEMDAGAQAARAQQWLAANAADARAWQIRWPAQHGWPLQLSWEDDGGTA
                     HERWVEAGTGMPQPPPRLRETEGGRHFMSFHYTLHGGMAGYWLVGWITACMLLALVSG
                     VVVHKRIFKDFFTFRPGKGQRSWLDAHNLSAVLTLPFLFMIGYTGLTFFYSSYLPWPV
                     QAAYGDADDAYARYEAELAPARPVPAGILVAGAQLSNLPDLLARAQAISGQPPALVTI
                     QAPGTVHSVVEVEGRKTAGNTGRHLLSEASRVTFDAASGRLLQQHAAHPQQLGAVQVH
                     ETIEALHKADFGGWPMKWLYFISGLLGTAMIAIGTLLFSLKRRKRSEHEFGAATAGIY
                     RCVEAFNVASLAGVALASIVYLHGNRLLPLEMSDRSAWEIRIFLLTCAASVLHALWRP
                     PRLAWIEQLWLAAALCLALPLVNLATTGQGLLMYLQRGAWQQAGVELVALAFGLMLAR
                     MALMLQRRWPQTHEAARSAKPAPGQGAAHRWQVASRVLAASVGGYVFTALTATALALL
                     LPSLVNVRTSVSVLTSSLLGFVLLIAVAVGIFSARSVGKVWLVVAAGSALMGVWVAML
                     RPG"
     gene            complement(45411..47876)
                     /locus_tag="QEL58_000041"
     CDS             complement(45411..47876)
                     /locus_tag="QEL58_000041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006367491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent siderophore receptor"
                     /protein_id="HDS1674570.1"
                     /translation="MGYMKIKRALVARAFSTGVQATRLPLLAVCISSALAAPAIAQAQ
                     PASRMPFNIPAQPLDAALRRFSEQSRQQVLFSESAVAGRRAPAVTGSYTPQEALARLL
                     EGSGVRVNATRPGVFTLAQDAASPARSKDAQTTLQTVNVTANAPGEGSYTARELSLGK
                     LGQSIRQTPQSVSVITRQQLDDRNLTTLDEALAQTTGVTKTARNFGNHKFSIRSFTVD
                     DSNYLVDGVAGIVYAPVGWLPIDTAVLERVEVLRGAGGMMLGAADPSGAINMVRKRPR
                     DQAHLDLAATLGSWDNYRLEVDGGGPLNAAGSVRGRLVAAYQDRHYFQRGTSSKTPVA
                     YGVIDADLGQDTTLTFGLRHQASDTDGYWLFGLPRYTDGGALDIKRSTSLIQDWNRQE
                     GSVDEAFAEAEHRFNERWKARLSVNRTESDLDQRVAVPVGGVDRATGIGSRFYDIYFN
                     RSRVRSDGIDLHTTGSFDAFGRTHQLLLGAMWSRQRTRQSSADLAIDVPIDVYAPDHS
                     AIAQPLQPAWDWSENARAQQSGLYSNLRLQLAEPLHLTLGGRLSWVKYQSNDGFTGAK
                     SRDYEQKHEFTPYAGLVYDLGPQWSVYASYADTFQPQSSYVTSSGAVLDPAIGANYEL
                     GVKGELNDGRLNVSAAVFSIRKTGNAVVDASDPGSCPGSLASSDCYRNGGKLRSKGFE
                     LEASGELAPGWQMMAGYTHVTSRDDEGATISAETPRHLLRLSTSYQLPGRWNAFSVGG
                     GVSAQSSYSYPAYDDPDWRMGAAGRAVWDLRAGYRINPRWSVGVNVANLFDTRYYAMI
                     SQIRRGNFFGEPRNVMLTLRGAL"
     gene            complement(47976..49013)
                     /locus_tag="QEL58_000042"
     CDS             complement(47976..49013)
                     /locus_tag="QEL58_000042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FecR domain-containing protein"
                     /protein_id="HDS1674571.1"
                     /translation="MTDIPSAAGSDPFALHEAASTWLLRRQDVDWRPEDEAALQHWLA
                     ESEAHQQAFTDVAQTWHDLGQLPRPALASDTQAARAPAAPAALRPDGMTRRARSRRLP
                     RVATAAAVALLALGWVGYGWYTAPSYVQDVSTGAGEIRDLQLPDGSRISLNARSTLAV
                     HFYRSRREVVLSQGEAFFEVAPAAERPFTVDAQRSRVTVVGTAFNVRNGPGEVLVKVL
                     HGHVRVQPDRTEGTAPVSLYAEQGLAVTTATATYRPISASADSIGGWRNGRLVFRRTP
                     LDEVAQEVAQYLGHPVTLGQPGLKFLPVSGYAATDAPASFVEALPDLLPVRVTRTAQG
                     GYRIDERPVTR"
     gene            complement(49010..49696)
                     /locus_tag="QEL58_000043"
     CDS             complement(49010..49696)
                     /locus_tag="QEL58_000043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012511080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HDS1674572.1"
                     /translation="MSALGRGTGGAANHSASAEAGLAESGSSTGGSLLSKAYARWRAP
                     ILRGLARVRGGDAEDALHDGAVKWIAANPSLASSDQQGAYLRRTVMNTVADEYRERSA
                     GRHVQTVPLADAEDAGHPMASDESQCPLQLTAQRQRLQRLADAMAELPERQREAFVLC
                     RFDGLTQEEVAARMQISRRMVVKHLSRAVAYCQVRVRYASLEQMQELHRSSEAGEGLA
                     PAIDADLPCR"
     gene            complement(49882..51270)
                     /locus_tag="QEL58_000044"
     CDS             complement(49882..51270)
                     /locus_tag="QEL58_000044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674573.1"
                     /translation="MLALFAAAAPAFSAPAAARPADDAGRQWLAGDHHVHSEWSVDWD
                     RRTTPPTPVRGGDSPYSRSHNAAQARAFGLRWMVHTDHGGPGHSAVTRDHAYPALLQA
                     RTDVPEVIQFNGMEFDVPAGEHASLIIAPGPQEREQLVVAERDFSRSEPLHGSRDSEQ
                     QMQAALAYLRGLAPAPLMFINHPSRTATGIGEWGEVTPDELRGWHAAAPQVLVGMEGA
                     PGHQAIRSERGLYRNAAAPTLGGYDQMTAQVGGIWDQMLADGIRFWITANSDSHVNLR
                     DGGRDYDPGEYSKTYAWARPEAEDILDALRNGRMFTVTGDLIDALQLRVAAGDSSAGM
                     GGTLVLPAVQTMQLEVRARQPARANASGQHPALERIELIVGGRDEGGALQMQRRGFDA
                     ATWQRDGDWIVARWSVPVPPRGGFVRVRGNSTGAVDALADAPGEDPWADLWFYSNPVF
                     VRVAEGAGPSRE"
     gene            complement(51363..54431)
                     /locus_tag="QEL58_000045"
     CDS             complement(51363..54431)
                     /locus_tag="QEL58_000045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008267152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDS1674574.1"
                     /translation="MRRTLFLSIALALQITATAGANAAEPARVASEAIASQPLDGALN
                     ALSRQTGLQFVYNAQNAGNPRTPGVPAGLSADAALTRLLAGTGLRYRYLNATTVTIEA
                     QDASAPAATSALAAPEAAVGAVAASAPAGAASSGAQAANLETIQVTGSYSRSLEKAVD
                     IKRATVGFSDSIVATDVADFPEQNLAEALQRMPGVTIERNKGLGTKVNVRGLPSEYTH
                     VSINDLATASGSGGRDVEFDMFASEIIQQVTVQKSPTAADEEGGIAGSVKISTARPFD
                     YNERKLVFSAEGAHNSISEEVDPRFAFLAADTWGDWGALVSYSQSKRTNRTDSTSGIN
                     FRPSSRFLTASGTRGTQAQAVLLRDAGVNITNRNDAEQTNRVVFQDKVGDRVYLNEQD
                     KWGATGSLQYKPSNNFSLTFDAMVGGYDSTEDEYDAAAYSASSRSTFDTIHAYDATTL
                     SEYGMVVLRDVSYTATQHEMLSKERINKTDYSQYSMAMDWKGDRWYVDALVGYSGAEK
                     TSDFSNLKHVAYAPSRTRWTGSSGETIPTAAAGSFDMYNDPSRYLFEAYETTLEKVKD
                     DKYAAQVNVTRLLDMAFLPALHTVRFGARYTDRSKERQYGELKITGPSAGSSAWVNTR
                     TMADSPLQYIDDIVPGGSYSNKGLAWQQISNDYARSAFRYAGFQTPFDPGQFYQVDEK
                     VMSFYAMADFAFDIGSVPFTVNAGARYVDTKVDSFGYHPIQLPNGSTGYTDTPVSKDG
                     SYDDLLPSFNMTAELSHGLLLRAAASKVMMRPALADIAYKRTASWGSYRFTDGNPELK
                     PTYAKQWEIGLEKYLDNGALFAASYFRKNIDGVVINSLTGVVQNVAVYNANGSLNGIY
                     DFDVYQPVNAKGSYQVDGVELVAQLPLNMFTPWLDGFGINANYTMLDSSLAGESSLGI
                     RTPMPGLSEKTWNLTAYYENSRFDARVSYNHKGAYVESIGYNLYPIWRDAYGQMDVSI
                     GYRITDNIKISLKGINLTNERTSGYTMDPSFPTMDETSGRRISLGLRADF"
     gene            complement(54544..55584)
                     /locus_tag="QEL58_000046"
     CDS             complement(54544..55584)
                     /locus_tag="QEL58_000046"
                     /inference="COORDINATES: protein
                     motif:HMM:NF016648.1,HMM:NF027545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FecR domain-containing protein"
                     /protein_id="HDS1674575.1"
                     /translation="MATEHPSALTLAAAQWHALQREGDLSPSQQHAFMQWLLVSPEHL
                     REYMAISEVAGALADALRDMPDDVDALLKAPAPTRNDHNVVRLSPRPSAAPSQRPARP
                     APGLPRIAAAAALMLAVGVGATIALPRTGHYVAAHGMPRQVTLPDSTVVRLDAESEIS
                     VRMTLLGRRVELERGQASFVVAKDRRPFAVHAAGLQVTDIGTTFDVSLLREQARIGVS
                     EGRVHVRGDGGRGRMLADLGAGQAAQVDYRDQRVRIREEDAASMTAWWTGRVLFRDEA
                     LRDVADRFNRRNALRLHVSDDAGALRLTGNLRADDVASLRAFLDQQPTLVTQVAPDGI
                     HVRLRAGAPQAL"
     gene            complement(55587..56111)
                     /locus_tag="QEL58_000047"
     CDS             complement(55587..56111)
                     /locus_tag="QEL58_000047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017156343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HDS1674576.1"
                     /translation="MAEQARRRLARMFEEHAPLLRGFFVRRGARQDAEDLVQETYLRL
                     LRAHEGKGEPIANPEAYLFTVAQNLAREQAARRRWSTLSIEEIEGPGQSLASGECVED
                     AAEREQRRQRLQTLLETLPEHTRAVLVMQYRDGLSYKQIAERMGVSAHMVKKHVVRGL
                     SVCRRALAEPAGRS"
     gene            complement(56267..56947)
                     /locus_tag="QEL58_000048"
     CDS             complement(56267..56947)
                     /locus_tag="QEL58_000048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008264670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ArsR family transcriptional regulator"
                     /protein_id="HDS1674577.1"
                     /translation="MDKAKSIPQPRQAIYHALADVAQAIGHVHRLELLEAISQGPRSV
                     EALAEATGLSVANTSRHLQLLRRARLVEPDRQGKRIYYSLSGEAEVVALLRALGCFGE
                     RNVAEVQGVMRDFFEQRDALEPVSREALLERLETDGVTLLDVRPSSEYALGHLPGALN
                     VPASELEAALINLPRDREIVAYCRGPYCVMSFEVVEKLRALGFTVRRLEDGFPEWKAA
                     GFEVVTGP"
     gene            57037..57303
                     /locus_tag="QEL58_000049"
     CDS             57037..57303
                     /locus_tag="QEL58_000049"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674578.1"
                     /translation="MPGNPMHRQVFLLASAQALFQIVSVIVMTVGGLAGAHLAPAPQW
                     ATLPIATMFLGTALTTFPAAMWMARAGRQRGGRRSVPPPGRSRW"
     gene            57303..58082
                     /locus_tag="QEL58_000050"
     CDS             57303..58082
                     /locus_tag="QEL58_000050"
                     /inference="COORDINATES: protein motif:HMM:NF019310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDS1674579.1"
                     /translation="MAGGIIAALVGPSLARLGGPLLQAEYQGSFLILAVVSLVATGVL
                     AGLRMPATPETEPGEPAGRPWQQIVFQPAYLVALFGAATGYGIMILAMTATSIAMVHH
                     HHALGSAATVIQLHVLGMFLPSFLTGSLIARFGAVRIMLAGAVIFVGHVLMTTTGTGF
                     GSFATALVMLGVGWNFMYVGGTALLTTTYTQAERARAQAINDMTIFVVGLGCSFGAGG
                     LLDALGWQRMNLMLIPWLLAAAAALAWLGRKGRRAALASGV"
     gene            complement(58140..58667)
                     /locus_tag="QEL58_000051"
     CDS             complement(58140..58667)
                     /locus_tag="QEL58_000051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1453 domain-containing protein"
                     /protein_id="HDS1674580.1"
                     /translation="MNMLQHLVSQTPTWVWLLLAFLVTRGIAAMKPGETSLQKLAVVP
                     VLFTVWGAWSISHRYGMSLSTWAEWLAGIGSGAALGWLLLGHLKLTFDSATGKLWRNA
                     DYSVLPLLLVTFLVKYGFEVAFAISPALTNHAGASAAYLLLSGGFTGLFIGKYCRYLA
                     SLRLDAAGKGLGIAG"
     gene            complement(58770..59588)
                     /locus_tag="QEL58_000052"
     CDS             complement(58770..59588)
                     /locus_tag="QEL58_000052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012511097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like serine protease"
                     /protein_id="HDS1674581.1"
                     /translation="MIRWLLLAFAALPSVAGAVVIRHDVDDARYRIDGSEFPALADMP
                     GEGQGVLIAPRWVLTAAHAAPMEGMGQAIAINGTDYGVERVILHPGYRKMPDALGKEA
                     LATGSPAKIHAFLAESDDIALIRLAAPVNDVPPVALYRGNAEVTQAATLIGKGATGNG
                     AVGLVPGGSHRTALRRACNAITGGNDRYLWYRFDAPPQGLPLEGVLGNGDSGGPLLVE
                     DHGTWQLVGLGSWISAVPEHALEAGFYGQVVHNVRVSRYVDWIESVLVSFRSPK"
     gene            59779..60057
                     /locus_tag="QEL58_000053"
     CDS             59779..60057
                     /locus_tag="QEL58_000053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012511098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674582.1"
                     /translation="MTKLHTLLLTGGLLALSPLASAETVNLTNSADGANREAGITAVK
                     KKLQDACTDRKGSPDAASFEVVFEKTSENPNVPKPYYVDGRMKCDLPG"
     gene            complement(60068..61573)
                     /locus_tag="QEL58_000054"
     CDS             complement(60068..61573)
                     /locus_tag="QEL58_000054"
                     /inference="COORDINATES: protein motif:HMM:NF012371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class A beta-lactamase-related serine hydrolase"
                     /protein_id="HDS1674583.1"
                     /translation="MPSAILQFSMEWKRSVLRMVSAAAGSLVLLAGVAGQARAAAGPA
                     EIAQLVDSYAANRDFNGVVLVAQHGRILYRGAHGLANREWQVPNVEDGVFRIGSLSKP
                     ITAILVMQLVQENTLRLDGTLGEYLPALYAGTPAAAVTVAQLLNHTSGIADLPRSYED
                     PWWQTQARLSLAPDDFAKAWIPGTLQSAPGAEWRYNNNGYFLLGLIIEKATGASYEAN
                     LQRRILDKAGMTNSGLYHASALIPRLATGYQTRPDFSLARPMPIDPSVSFSAAGLYST
                     VDDLLRLDQALQDDSLLSAPSRRAMWTNHRSGYGYGWEVENWPLPAGGTYPVESHTGS
                     VPGYQTYWLRAGQDHSVVIVLDNYWQGETAASLGKELMGVLHGMPVTLARKNLGTLLV
                     PAALSSGVQGMTRAYEALGPAASQYDTSEQALNSLGYRLLRMKRVPESVAVFQWNARA
                     HPQSANVHDSLGEAYRANGQRKQAINSYRTAAALAPGDARLRAVLKELEQE"
     gene            complement(61654..62526)
                     /locus_tag="QEL58_000055"
     CDS             complement(61654..62526)
                     /locus_tag="QEL58_000055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylenetetrahydrofolate reductase"
                     /protein_id="HDS1674584.1"
                     /translation="MSARAPAQAAAFINRYSLEVGAKALPALRAEADRIPPGTTISIP
                     YLASEDDNARLAAARIVRQLGFEPMPHLSARRIESRAALERFMQRAASEAGVERCLLI
                     AGDLAAPAGPFADSAAIIDTGILEGSGIKVVAIGGHPEGHPVMGSGERWQVLERKCQA
                     IEARRMAPLIITQFAFDADIVLAWLDDLRSRDIRVPVLVGVPGPASITRLARYAAMCG
                     VGASASMLARYGISIGRLLGTAGPEVFVDHLVRGLTDAHGAVSPHFFPFGGIAPSLAW
                     IERYRQRALASSPS"
     gene            complement(62526..63440)
                     /locus_tag="QEL58_000056"
     CDS             complement(62526..63440)
                     /locus_tag="QEL58_000056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDS1674585.1"
                     /translation="MLERIHLSIVQQVEQQGSLTAAAGVLNLTQSALSHSMKKLEQQL
                     GTDVWLREGRSLRLTQAGQYLLAVANRVLPQLDLAEERLGQFAQGERGALRIGMECHP
                     CYQWLLKIVSPYLAAWPDVDVDVKQKFQFGGIGALFGYEIDLLVTPDPLLKPGLKFVP
                     VFDYEQVLVVASSHALARVDHVKPRQLGQEVLISYPVPFERLDIYNQFLLPAGITPRR
                     HKTIETTDIMMQMVASGRGVAAMPRWLVEEYAARMDVVPVRLGAKGIPKQIYLGAREA
                     DTTIDYLQAFVELARNSTPIASNVRGGG"
     gene            63616..64197
                     /gene="msuE"
                     /locus_tag="QEL58_000057"
     CDS             63616..64197
                     /gene="msuE"
                     /locus_tag="QEL58_000057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006367927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FMN reductase"
                     /protein_id="HDS1674586.1"
                     /translation="MTRPLRIVAVSGGLQRPSRAATLAEHLLDLIGEDVACEPHLIEL
                     GELAPQLAGALWRSQLPEAVERQLAAVEQADVLVVATPVYRGSYTGLFKHFFDFIHQD
                     ALVDTPILLAATGGSERHALVIDHQLRPLFSFFQARTLPLGVYATDRDFADGRVHNDA
                     LMQRARLAVQRAMPLLALSHRAAPATAEIAAAL"
     gene            64255..65232
                     /locus_tag="QEL58_000058"
     CDS             64255..65232
                     /locus_tag="QEL58_000058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010485654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1852 domain-containing protein"
                     /protein_id="HDS1674587.1"
                     /translation="MTTDSFTFSITRIPFNEDYQPADGTRITTNFANLARGASRQENL
                     RNTISMINNRFNDLAHWDNPNADRYAVELDIISVEMHIDGGDGSDPFPLIEVLRPTIV
                     DAQTGTRIEGIVGNNFSSYVRDYDFSVVLPASNEGKATFGIPDGFGDLHGKLFRHFLA
                     SDAYRANFSKAPVICISVSSSKTYHRTENHHPILGVEYRQGEFSPTDQYFDKMGLQVR
                     YFMPPGSVAPLAFYFRGDLLGDYSNLELIGTISTMEAFQKIYRPEIYNANSVAGKVYQ
                     PSLKHQDYSSTRIVYDREERSQLAVKQGRFTEEHFIKPYRAVLEQWAAR"
     gene            65271..66305
                     /locus_tag="QEL58_000059"
     CDS             65271..66305
                     /locus_tag="QEL58_000059"
                     /EC_number="2.1.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008264597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine synthase"
                     /protein_id="HDS1674588.1"
                     /translation="MSTKKLLPTSTAGSLPKPSWLAEPEKLWSPWKLQDDALTEGKQD
                     ALRLSLQEQQHAGIDIVSDGEQTRQHFVTTFIEHLSGVDFEKRETVRIRNRYDASVPT
                     VVGAVSRPKPVFVEDAKFLRRQTSQPIKWALPGPMTMIDTLYDAHYKSREKLAWEFAK
                     LLNEEARELEAAGVDIIQFDEPAFNVFFDEVNDWGVAALERAVEGLKCETAVHICYGY
                     GIKANTDWKQTLGSEWRQYEESFPKLQTSSLDIISLECHNSHVPIDLIELVRGKKVMV
                     GAIDVASSTVETAEEVANTLRRALQFVDADKLYPSTNCGMAPLARDVARGKLRALSEG
                     ARIVREELSA"
     gene            66438..67685
                     /locus_tag="QEL58_000060"
     CDS             66438..67685
                     /locus_tag="QEL58_000060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019337719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenic transporter"
                     /protein_id="HDS1674589.1"
                     /translation="MPASYSPLLIWAAVAVATVGLLFRPFRIPEYVWALGAAALLPLL
                     GAVSLDMTWGAVAEGRDVYLFLVGMMVLAELARREGLFDWLALYAVRHAGGSGRRLFD
                     LVFLVGTLVTVFLSNDATAVVLTPAVYAACRAARANPLPYLFVCAFIANAASFVLPIS
                     NPANLVVYGQHMPPLLQWLAQFALPSLAAIGATYLVLRWVHRHEIAQPLVAAPEHRPL
                     TDGGRLSALGVLFTGSALLVTSALNGPLGLATFCAGGLSVAVVAIRQRRSPLPMLRHV
                     SWGVLPLVAGLFVLVEAVAQTGAIQSTARALQALAQTSPGQASWLAGGAAALLSNVAN
                     NLPVGLAAGSLGQMADLPAQTRAALLVGVDLGPNLSVTGSLATMLWLVALRREGEHVS
                     ALDFLRVGALVMPPALIGALLLL"
     gene            complement(67698..68876)
                     /locus_tag="QEL58_000061"
     CDS             complement(67698..68876)
                     /locus_tag="QEL58_000061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005420857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-lactamase family protein"
                     /protein_id="HDS1674590.1"
                     /translation="MEAPLKTMRYRPRLPVLLMSSALLLAGCGGQKPSADLQADIDEV
                     AQTLVEQPLLHSASIAVVHRGRSFIGHRGQMVAGSPGAPTDATIYEIGSLSKTLAGTL
                     MADAVLDGRLSLDDDVRTFLQGNYPNLQYQGEPIRVRHLLSHTSGLPNMLPERANTVL
                     EDFTDHRTPAELNALYAHYGKPDFLRDLHAVRIPRAPGKEYVYSSAGTELTAHILEVI
                     HQRDYQSLLRGFFSDAAAMTGLRIRLDDADASRLAVGYHSDNPVPTTPMPPLPWGASG
                     GVKATVPEMVKYLQFQLANGPVVKESHRALARFDDEFSVGYFWNIVAGDRQKGVYYAH
                     HGGVPRSQCYIYIMPKHDLGIFVITNQSGDQTARAMEAAIDTLVGKVVAREALPPRAG
                     "
     gene            69225..70067
                     /locus_tag="QEL58_000062"
     CDS             69225..70067
                     /locus_tag="QEL58_000062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDS1674591.1"
                     /translation="MMISLAGQDEVGPDYPDRIDLPVMVLGLEPIPDAWEMPFHEHRK
                     AQVMVATRGLITLETHAGLWVVPPQGAVWIPGGLTHRASSSGKPHGFVVFVEPGAVTG
                     LPTQCCTMAITPFMHALLERVADHPQQYEHGSAQARLMAVLLDELIAAPPEWIHLPMP
                     SEPRLRRLASAMLAAPAERATLDVWAGRIGMSERNMSRLFSGETGLSVRRWRRQMHVV
                     VALPMLAGGKTVQAVADELGYDSAGAFVTMFRKTVGAPPKRFLAERSTRLRGPGAEDQ
                     SQRW"
     gene            complement(70055..71056)
                     /locus_tag="QEL58_000063"
     CDS             complement(70055..71056)
                     /locus_tag="QEL58_000063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012511117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PHB depolymerase family esterase"
                     /protein_id="HDS1674592.1"
                     /translation="MNSTIDSIKRVLLMLCLCLAAGSASAAGPAGHWDIGLYGNLFGA
                     REYQVWVPAGYDDAQPLPLLLVLHGCVTGPNLMGEASGFNDVADTEGFIVVYPRQNVT
                     ANPARCWNWQLPINQARDSGEAAILAGIVDKVKAGYSVDPHRVYVTGISAGGAMTSIM
                     LACYSDVFAAGAIHSGGMFKGATTISGSAYALLAGSIYSPDSNGRLAWQCSGSPSPRP
                     LPVLVFHGSADLTVNPVNGQQAVRQFLQTNDLADDGQDNDSVKYVPTSTHHGQVPGGR
                     AYTVDTYAYGGRTLVQHYVVQGMGHAWSGSQSGLPFTDPKGPDATLITWLFLKDYQR"
     gene            71278..73440
                     /locus_tag="QEL58_000064"
     CDS             71278..73440
                     /locus_tag="QEL58_000064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017354330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDS1674593.1"
                     /translation="MIGAWLAAGPVLAQEAPPAGRSASPTNLDSIKVTARKREETLQE
                     VPVAVTAFTSEALDRMNVQDISDLDAQVPNLTIYAARGASSTVTAYIRGIGQSDPTWG
                     ADPGVGIYLDDVYIARPQGALLDVFDVSRIEVLRGPQGTLYGKNTIGGAIKYISRGLP
                     TQTEGFAQITVGNYSQLDAKAAIGGPIGGADSGLRARVAVASMNHDGFGENTINGQPV
                     SDKQVNAARLNLGAYAGDDFDVQFALDWIDDQSGMRGSKMLAPNPFLRPYPPMDSRYD
                     IRSGMRNLNNVETKGASATVNWRPNEDIAVKYVVAKRESDSEANIDFDTTPVKLADVS
                     GTYNDNQVSNEVQLNYDAGGRVRGVVGLYQFSGEAGGQIQNNYFSAQFADNQGKVLTD
                     SIALYADWTFDLTSRLKLDVGARYTDEDKRAIVLNRLYADPGFSRPVAVTADFDKKTN
                     FTNVSPKVSLDYQITPDIMVYGLATRGFKSGGYNIRANAVAVPRSAEPFDDETVDSYE
                     IGSKMAFLDQRLFLNLSAFYNKYKDIQLSVFTGLDTNGDGIDDSFFGDFTNAGAGTVK
                     GLEVEYQYLPTQHWLISGNLAWLDTKYDEYMDRGINVARQMKFTNAPEFSGALNVEYR
                     TELANGSNLSARVSYSYQSEVWPTTDLSPVIRQDGYGLVNAGVIWRLDDAWTFSLQGT
                     NLTDKEYRTTGYNIPAVGTLIGFYGPPRQYSLSVRYDF"
     gene            73474..74352
                     /locus_tag="QEL58_000065"
     CDS             73474..74352
                     /locus_tag="QEL58_000065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDS1674594.1"
                     /translation="MMQSYVDLYWNSDDGLRLHARDHAPDTGQAARGTVVCIPGLTRN
                     GADFDALAGILTAVGWRVIAVDLRGRAGSERAHDPSSYNPRTYADDMVALLRAQNIDK
                     AVFIGTSLGVLVTITLASRAPQLISAAVLNDAGPKVPREALARIGKYAGKPVPPMDLE
                     QATAYVASIGKAAFPRFSTEDWRAMAVRTFRPRSDGRLELDYDPAVIRTTRPWLLWLL
                     RPVLWRAVRRLTARVPVLVVRGALSDILPADVARQMAATSERARLVEVPDVGHAPMLS
                     EPEARDAILALLERVR"
     gene            74349..74834
                     /locus_tag="QEL58_000066"
     CDS             74349..74834
                     /locus_tag="QEL58_000066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006368049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC family dehydratase"
                     /protein_id="HDS1674595.1"
                     /translation="MSSGAVADALPSALQALQRWAAEERVGAGMRITQATIDAFADAT
                     GDHNWIHVDPRRAQAELPGGRTIAHGFLLLSLTVQDDVAALAGFPGVAHVLNYGLNKV
                     RFLAPVSSGTDVRVRSQLVSLDARQPGQWLLTQRKAVERVDDGELALVAEQLSLIVLA
                     P"
     gene            74871..78200
                     /locus_tag="QEL58_000067"
     CDS             74871..78200
                     /locus_tag="QEL58_000067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing hybrid sensor histidine
                     kinase/response regulator"
                     /protein_id="HDS1674596.1"
                     /translation="MLTPTVVLFACIAWTVLLFGVALWGERQGHRLAHAWPAIYALSL
                     AVHCTAWTYYGAASQGLQWGFPIPPTLAGMALIFAFGLPFLVRLGRLAKQHNSATIAD
                     LVVARLRADRGLGFTITLVALFGIIPYIALQLKAVSQGLGALLGDRFAPAGTHLDMSF
                     WFALTMAAFTLLFGARKASATEPNRGIVVALGLESLLKLAALLAIGLYAALSVHRSGM
                     PLLDRMAQLPPPAIVPDYLTMVALGAISAFTLPHQFHVGVVELRQSSDLKTARWMFPV
                     YLLLIGLPSVPMALSGAAQLPASVTPDLYVLALPQAGGHHLLALLAYLGSLSAATGMM
                     ILSGLTLSIMLGNHGFGSRLISGFEGGVAHADLRPRVLAFRRAGILAVFLMSWLYSRA
                     MSDTEALSDFGLMSFTALSQLAPAVLLAVYRPRTPSPAIVAGIVLGSLAWLWLVLLPM
                     VLPAPAASAEGLHWLTVVSLRMQPGHIAISMGASLAVNLLTVALVSRAVRPSLPRRRD
                     AVAAATLRKTAGRFLGQERARQLLAGDAGQLLDDDRVTAVERELTAVVGAGMARLLVE
                     AARDGGAAPLDAVTRAVGEATQVLRFNQRLLEAALENMSQGISVVDAQLQLVAWNSRY
                     AALFRFPPELLQVGQPVINLTAWALAQLKIGEGPADSPQQALQRRVAHMQRGTPHLSE
                     RVFPDNTIVEIRGNPMPGGGYVATFTDVTAFRRAEDALKRSNETLERRVQDRTARLQQ
                     AVQDAERANAAKTRFLTAVGHDLMQPLHAAQLLTDAMSQHIESGFLDSFLHQIRGALD
                     STDDLLSGLLDISRLEAGGLVADPRPFALSTVLDPLAQEFAVLAAARGLQFRYLRTRA
                     WVHSDPLLLRRVLQNFLANAIRYTRHGGVLLGVRRQGQCLSIGVHDTGPGIAAEQQAV
                     VFEEFHRVDRSNGQGLGLGLTIAHRIAALLHAPLQLRSVVNRGSVFSVSVARSAAPAA
                     PRIEPPANAGSTLRGTRVLVVDNDADALAAMQQLLLSWGCDVFALRGAEGIDASAHDA
                     ALWLFDYHLDDGDTGVALFTRLAAAHGPRPTVILSADTGAETHEAVRGAGLSLLSKPF
                     RPLALRWAINHLLASAAAAAP"
     gene            complement(78205..78879)
                     /locus_tag="QEL58_000068"
     CDS             complement(78205..78879)
                     /locus_tag="QEL58_000068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012480332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDS1674597.1"
                     /translation="MPTLLIADDHPLFRAALHRAAEEAVADLQISEADSLDGVLDVLE
                     RQPIDLMLLDLHMPGNHGLAGLATLRALQPGLAIIIVSANEEPKVIRRAIDLGAAGYL
                     PKSSGLNELQCALQSVLEGERWIPSLLREPVARVAAFSKDADLAARLASLSAHQYRVL
                     SLVAEGLLNKQIADRLGVQLRTVKAHMTRIMERLGVRNRAQAIRVLHEMGLADPSRQI
                     EDAAER"
     gene            79009..80643
                     /locus_tag="QEL58_000069"
     CDS             79009..80643
                     /locus_tag="QEL58_000069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008267041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid--CoA ligase"
                     /protein_id="HDS1674598.1"
                     /translation="MSFPAAAGASTCPLLIKQLLHTPLAVNPGQEIVYGDSVRFDYRT
                     LQARIGQLAGLLTSLGVRHGDTVAVMDWDSNRYLEAYFAVPMIGAVLMMVNVRLAPEQ
                     IAYTLNHSGARVLLAHREFLPILGGIDEQLPDLRTRILLEDAVGPLPEGFVTEYEAGL
                     RAASAVTQFPDFDENTRATMFYTTGTTGLPKGVHFSHRQLVLHSLTGMAALGSAATQG
                     RLHRGDVYMPITPMFHVHAWGLPYVATLLGIKQVYPGRYLPANLLALIAREKVTFSHC
                     VPTILHMLLEHPAAADTDLAHWKVIIGGAALPRALAQRALARGIDIFGGYGMSETCPL
                     LTIAQIDAEAVTDADEVLSLRTKAGIPVPLVELRIVDPDMNDVAHDGIATGEVVVRAP
                     WLTEGYLHDPAASEALWAGGYLHTGDIGNIDGGGYLRVTDRIKDVIKTGGEWISSLAL
                     EDIIALHPAVSEVAVIGIADTKWGERPLPLVVRKVGSDVTEAEIIDLVAARSRSGDIS
                     RYAIPERVSFVQSIERTSVGKINKKKLRGMHDPGRP"
     gene            complement(80689..81936)
                     /locus_tag="QEL58_000070"
     CDS             complement(80689..81936)
                     /locus_tag="QEL58_000070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674599.1"
                     /translation="MALQQELRDLINLSHALAWKGAGDSPSASNIPDEPGLVSAFLDE
                     SIQNQLEASLQGALGSSASVQVNSIFTHKTPLVTPEGRSAVEIGDLLLVRQHFVTTTD
                     SVEGRALLLQAKRNKHPDSGDISEGKPQIQYLLYKDWPRFHGDGRLGHCPDPTPTGGV
                     EQPWDFSLSNPLGRFGQYVAIFDGQAHPHPAVLPLAAPTAAFDASRYPPDGGKGTPRT
                     TWACGQVQPTPPVTNIACNEDFAEVLEHFFLGTVGEHFTPGTVSGDDHWSRFVTTMLG
                     AATQSSYTFLSSRTNVLKPISRGAKISTLLGIQPLLKLAIMKEIDRHFRSAAFTASFD
                     YDHEPHFFHRAIERSAFVNHLAQIQQRLRRELDIEYGGWLPPDDMPGPDKSGGGHVPI
                     LSIASSGPKPLLPEPREPRFRGE"
     gene            82084..83013
                     /locus_tag="QEL58_000071"
     CDS             82084..83013
                     /locus_tag="QEL58_000071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674600.1"
                     /translation="MDFTGFTSRFPSNRPLAAFDREHRLRQKTRLDVPLLAQLCVVKM
                     NSNCLVSVDRWYGPRGFVALLGAIGVAFGVGGMSMLLWLLVVEKLPNENGLWAAVFIS
                     IAMLAVFTAASAWVACRELFRWTYYPIVFDRKHRQVHVFRLDGTILSAGWDQIYFTLG
                     RGTGTFGWRNWDVRGLILDADGATVREAFAFCIATSRIKNAHAHWEFLQRYMEEGPAA
                     VLDAVQYCMPVDGKRESLAFCKERIFAADAQMPAVMWLTMLPFNHLHAMMRWAVMRTS
                     RIPMFPPDIEARLQPEPGDTHVRDASMNPPDLR"
     gene            complement(83014..83367)
                     /locus_tag="QEL58_000072"
     CDS             complement(83014..83367)
                     /locus_tag="QEL58_000072"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674601.1"
                     /translation="MNTPSPDPATTPSQGRALRRWMLTLAALFGVALLIYLGSAILPL
                     ARPGGIYGGMGVMMMLPILLACAALAALLGSSVVAAIAWWAGVRRIGFVLVMLLAACL
                     SAVSFIAGFDSPLAR"
     gene            complement(83379..84866)
                     /locus_tag="QEL58_000073"
     CDS             complement(83379..84866)
                     /locus_tag="QEL58_000073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674602.1"
                     /translation="MTIARLLLAAVLVAPGAAGAATDWRGTLLTDLEAADAAMRGSHP
                     GTVDRQHPGFVVQLRDALAVARSRADTVDSFAGYWWAMKGYAASFNDGHVSLNARAAA
                     PELPTRWPGFLTGFDGDVQVVMSVDDGPGHPPLGAQLLSCDGVDAATLAARRVGDFSG
                     RWNLQASRIQGGGEVLLEQGNPFLPTPRRCEFRADGRETAYALQWTPLDPAQRTQRLA
                     DTRRSFRPANAWRALPGGGYWITTSSFNADPAAQNFKELTALLEALGRVPEPLQQAPL
                     VVLDVRGNTGGASQWSIELARLIWGRAAVDALPDHSWVEWRTSDANIAQLRGFLQKLE
                     QAPDASPELLRMLETVTQGMAQARERGEALWREPPEPKASAAPASAPVVPVRAGRVVI
                     VADAACGSACLDALDLWKRLGAVQVGVETSADSLYMDVRPDMLPSGLARISVPMKVFR
                     GRVRGSNEPHAPDRRYGGDMRYTPALEAWVLSLQQNSGPGPVGPP"
     gene            complement(84907..86481)
                     /locus_tag="QEL58_000074"
     CDS             complement(84907..86481)
                     /locus_tag="QEL58_000074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019336523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HDS1674603.1"
                     /translation="MRKVLLLLLLLTGLAPSAWAATVKTTHRTIPSWDGTPLGAFVIE
                     PQDAGSGRYPLLVMPSSWAVPSVEYVGVAQALARRGYVVISYSSRGFWESGGSIDIAG
                     PATVEDVSALIDWALDNTRADPSRIGVSGISYGAGTSLLAAARDPRIKAVAALSGWAD
                     LQASLYSNDTPSAQGIALLVAAGLATGRPGTELATINRNVLVGNYQGAVDSLLPVAAQ
                     RSPAASIDEINANQPAVFLANAFNDSLFPPGQLVDFFNRLKGPKQLQLRHGDHALNEA
                     FGALGIPNEVYDQVGDWFDHYLKAVANGIDRQPAVQLKSQKGSWSRYPDWKATSDGAV
                     SYGLTAPSGLLLPTGGLAEKGGTTGWNYRIGSGLLTAANSGVAMASGALQMINLPPGA
                     YVPFVGRSAAGVWQGPVQWSARRLDGAPEVRLTVTPSRANTTLYAYLYAEDVLGNGQL
                     ISHKPYTLRGATPGQPKTLDLRLEASSWNLPAGSRLTLVVDTVDLRYAGISQLGGTVT
                     FSSPAGAPSMLKVPLH"
     gene            86975..87715
                     /locus_tag="QEL58_000075"
     CDS             86975..87715
                     /locus_tag="QEL58_000075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA/RNA non-specific endonuclease"
                     /protein_id="HDS1674604.1"
                     /translation="MRLASFFLAFVLSAFAGAAQAQVVTLNKGGFVLTYDCSIHSATR
                     YEYTLTADTGSAARPSSFYKDPDLPAGCLGQSSTASYASIRSGYDRGHLVTSNHMDYN
                     ATYIRRANYMTNIVPQVSSFNQGIWVKAENVAECYRDIAPVDVYGGVVYGDASNDYFL
                     ASHGIPTPEFFWKTIITRDPNTGTAKAISWIIPNEANLGSLDNYLVTIADLEELLGAS
                     YVAINAPASLKNMLPATTWPQPAGCDLS"
     gene            87822..88517
                     /locus_tag="QEL58_000076"
     CDS             87822..88517
                     /locus_tag="QEL58_000076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005416634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family phosphatase"
                     /protein_id="HDS1674605.1"
                     /translation="MSRFPFDAVLFDCDGVLVDSEPLVARVLSEMLTERGWPLTPAQA
                     GEVFLGQSVAHLAGLIEERTGKPFTEEWLEEFRLQRNIALERDLQAIQGAPGAVRAIA
                     AATGGRIACASGADLHKVQLQLGKVGILDAFGDHVYSGQDMPNTKPHPDVYLAAAAAL
                     GVDPKRCAVIEDTVTGATAGVAAGATVFGFSEGGPHHSTPEALRAAGAQVIFQRMEDL
                     PALLAGYAVDAVA"
     gene            complement(88525..88755)
                     /locus_tag="QEL58_000077"
     CDS             complement(88525..88755)
                     /locus_tag="QEL58_000077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019337402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674606.1"
                     /translation="MSRGGWARPVHRWTSIVFTLAVIANFVARAMGQGEPAAWITYSP
                     LPPLFLQLFTGLYLFALHYAAKHRSASLGAAG"
     gene            complement(88752..89177)
                     /locus_tag="QEL58_000078"
     CDS             complement(88752..89177)
                     /locus_tag="QEL58_000078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012480348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HDS1674607.1"
                     /translation="MTNTVNTVGLYVRDQDEALEFYVGTLGFEVHTDVRNGSYRWLTV
                     RSPGQDGFQLGLFVPGPPTHDAATAQALQQLVAKGAMPPLVLAVDDCQARYAQWQAKG
                     VEFIQAPVERFGAIDAGFRDPSGNGWKMIEARSEARRRQ"
     gene            complement(89188..89658)
                     /locus_tag="QEL58_000079"
     CDS             complement(89188..89658)
                     /locus_tag="QEL58_000079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014647242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDS1674608.1"
                     /translation="MNQSPELLRRLLRAKDRMDRASHEDWPVARLAEVSAVSPAHFAR
                     SFKQAFGLPPHRYLLSRRIERAVALLRDTELAITEIAAQTGWTSLGTFGRIFRDITGD
                     SPGNVRDRERAGHAGHAAAESVPECHARAAQRPDLNIAVLEKRRRQAVANVDRT"
     gene            complement(89727..91082)
                     /locus_tag="QEL58_000080"
     CDS             complement(89727..91082)
                     /locus_tag="QEL58_000080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54-dependent Fis family transcriptional
                     regulator"
                     /protein_id="HDS1674609.1"
                     /translation="MAAVPEASSSRCVLWFGQPLPNERSALAAAGWYVRSIQPDPAMA
                     IGLRGRDRLLAVIDLRHLDATALQLLAPWIEQHRHLPWLAVLPPGAGATPSAWLPVLQ
                     HCPARFTLPFGLQDLVCAMRSQFDADDLPTDEACAGQGPRALIGESPALHAVRTVLHK
                     FAPVELPVLVTGETGTGKELAAHALHALSGRAGKPFIAVNCGAIPANLVQSELFGHER
                     GSFTGADKRQIGVFESAQGGTVFLDEVGDLPAEAQTSLLRVLQEGTFERVGSSQSLRA
                     DVRVLAATHVELEQAVAQGRFRSDLYYRLNVLRLLMPPLRERGADVLLLAEHFLRCFR
                     RRHTVRARGFSPTASQAMRRFGWPGNVRELLNRVQRAAIMAEGELISERDLELGEPAE
                     ALPSAMLHDARGQAERDVLLQTLRHTGYNVSECARQMQISRVTVYRLCRKHRLELPAQ
                     R"
     gene            91478..92008
                     /locus_tag="QEL58_000081"
     CDS             91478..92008
                     /locus_tag="QEL58_000081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674610.1"
                     /translation="MDGTTLIRGLAASLALALLAVATGAGASGARQGVKAQPGEIVLL
                     RDVAARPAYRMAPPGIALIADPKPQREVAAALGSGDPASGMDELSDADYAGMGAGHIT
                     PTTAPGGTTVERVTQQALGGTLGRNGDGMVGSSLGGTMSGPLGAVGNSTRGIADTVRG
                     ALGQFPLQGTAPAGGK"
     gene            92005..92622
                     /locus_tag="QEL58_000082"
     CDS             92005..92622
                     /locus_tag="QEL58_000082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006368472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674611.1"
                     /translation="MKALAWPLLAVIAAPLSASADDYSGMLAYLDLARIEGRALAGAS
                     GAIAVNQAAGDFNLQANLRGIARAERADVAISAQQLQNGNRVLSAPLHAAAHIGGEAL
                     AGASGIASINQASGSANTTLNVVSATLARQGIRETDDTALAAEGSALAGGRDGVDRGA
                     ATGTRSVGVASTALRGFDGVLQLNQIAGSGNDTANVLGLVVQDRP"
     gene            92665..93981
                     /locus_tag="QEL58_000083"
     CDS             92665..93981
                     /locus_tag="QEL58_000083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012511147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin"
                     /protein_id="HDS1674612.1"
                     /translation="MKATVKRTMLAMAIATASTAAAANGWDNQNANANINHNHTVSET
                     RNDTHNHTDNDVRNRTVNVNVQKHSNIQSDERKEKNNHGVDVNLEKDLRLSTDVNFSG
                     DPTITGDIDLDSAAIAVIDNRQSISNNATSNSLVTNRASIGDSVGAGASGNLGFNVVS
                     GDNNAQDNAASLSAADASFSFGMADAEVFVNQAGFGNVTQNAGVTNAATLGGNAFGGA
                     SGNIGVNIASGNNNEQKNALAASVATTAVAQSSISSNQVSTGNTVSNAGFVQSYTDTV
                     QVGMRGSVSGLTLGYGAGTYRGTGNAYQMANYYLDTWNGALPHPGGNSTGHIDLDNEI
                     QNATMNPNRPGVGGLGFDTRESGTSQFVELGVADLYASLSGTVSTTRWVNVDATNTSA
                     LSGSAFSGASGNIGVNVASGTGNLQANSLALAVAQPSTGGGGGSGE"
     gene            94080..94784
                     /locus_tag="QEL58_000084"
     CDS             94080..94784
                     /locus_tag="QEL58_000084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008264928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C39 family peptidase"
                     /protein_id="HDS1674613.1"
                     /translation="MFCCRPSTWLLACLLLLGITPAWAGEVRFSGVLPNGALLQQKVE
                     SMQERRYRNVVRQHTDYSCGAAALATILRHAYHLDTDEATVIQGMMGVSDPALVAERG
                     FSLLDIKRYVESLGMRGRGYRIDEARLRTLRVPGLVLMDVRGFRHFVVLKQVREGIVE
                     VADPILGNRSLALPDFLAAWPSRAVFVVIGSDFDRNTVLLQPSERPSARALYARQGPI
                     TDAELVDFGFSHADLF"
     gene            94798..95547
                     /locus_tag="QEL58_000085"
     CDS             94798..95547
                     /locus_tag="QEL58_000085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005413542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674614.1"
                     /translation="MIRLPLLMTLLLMLPALTVRAADAAPGRGLKEIPDPELNLMRGR
                     YTVGGNSVAWFGVTMVSQWQASNGTALQGTLTLGMDFRGGGAPKLSFQPSVHVTAADA
                     PLPVTAGRSIDSSGLANVSGLVQSVQVAGDGNAARNTTTLLVRDGDVPAMQSDSAHSA
                     SAQQAGVSASAVLDGNQARLQLQVDGQGLVQQWIRNGSVGQGIALAGDGQAASNQLRL
                     ELVRNTAGGNLPLSQNVAQAIALNRGMGPGQ"
     gene            95594..96931
                     /locus_tag="QEL58_000086"
     CDS             95594..96931
                     /locus_tag="QEL58_000086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012511150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter"
                     /protein_id="HDS1674615.1"
                     /translation="MHTLLRITPLALAALAGTALAAPPTADDNADVQALANQLEQLKS
                     NYAQEVRRLRELDMQVQAMQARLSGRTGPAGPATAAATGTGTGTGTEVEHGSTLQAAP
                     GQTAPGGEGYASTAAEAQQARQESRRSVDDVKQQQSALFSRRFTIENSLTYARYDRKQ
                     LTLNGFLALDAIFLGNIAIENVESDSLTYNLAARWGVSPNLTLNLDVPYLARRTVYQK
                     GGAGGAAAAIAQEQTNGNGLGDIGLSANYRLFGERGWRPETVLTAGVTAPTGRAPYGL
                     DWKVIERDDDDYIRFAVPKEQPTGNGVWQANVGLSMVKTADPAILFANLGYVHSFPRG
                     FNDIDSNPDTVNPGDVKLGGSVYFGAGVAFAFNERTSLSLSFSDRISARASTRFQGGQ
                     WMKVIGSDANAASLNLGVTYALNQHTTLVTLLGIGLTPDAPDFTLAFKIPYML"
     gene            97112..98635
                     /locus_tag="QEL58_000087"
     CDS             97112..98635
                     /locus_tag="QEL58_000087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006368715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674616.1"
                     /translation="MANIAEDGQLGWIVSKRPTVQGIDIGKGGEALPDNTYGIEIEFC
                     THDSVIFAFTHVVAACFDIAGTEPWKLESDSGNVFELVTPPLRFGDIDQAYAFKEQLV
                     AMLQASIQKAETQGVNAITLGDWAGQFAPKLVELLNTHINTGQLKLELVALKAIDYAS
                     WKEVGEGLNVGNVDDGINIPAGLLRHKLRRLDWESYTPGIILARCSKFWSEGYASQMN
                     LPMTLSGYFLYMMYKTHDKHYSQAVRTQQKLSGEKAGQKLTAWYWRHVLLQAWCRYQR
                     ALGVEPEARKLFSPEAIGRSALLYLVVGKLLTGALAELGEAPQLELQQKAWDAGSTRA
                     IDADEPEVTLGDWAPYHSALKDLTGIWLKASLMDVMRTQNLQTYTWAVTELPRVLART
                     EVWENALLNWKGMERIKAMGSTIEWTDLEEFAEPERRQVLYEKVVEVAGSLAEHLKHL
                     SPDKPGPPDLPDEKDRPFLDRRNTPAWEARYDTLLPPIAPRENTRNEFTYLIEHRNH"
     gene            98712..99764
                     /locus_tag="QEL58_000088"
     CDS             98712..99764
                     /locus_tag="QEL58_000088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008268298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HDS1674617.1"
                     /translation="MTQVYATLRSDDQYLIARKQITNAWWSGYAAPVLVAEAASALTT
                     VVNVAAGSAVNAGAVAAINASLANAVLAATSAWPAGAAANGVATRDAINQAAVAVNNA
                     GQVLAQLQAALPTVLAAVDRAAAMGAADWVAGGGAVPAWVQLQNVGIPAWPDPNLQAT
                     VNAAQRRISGWAGSQSPRLVNQAGQWALPGGRMSDAETAEHAARREFQEETGVELDAG
                     YVMAYHTLFQTAPGGADFYLVCFDLPGGQDIADLVTRINANLMAQTGWLNRPTAGSVV
                     DWELDAVCTVAQDELSSSLGTFQPVSIPDTLRPVPVPMPAGGAALAAWERRQRRFAES
                     QSIDWYLRMARYIEQQ"
     gene            99985..100275
                     /locus_tag="QEL58_000089"
     CDS             99985..100275
                     /locus_tag="QEL58_000089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014200159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RebB family R body protein"
                     /protein_id="HDS1674618.1"
                     /translation="MAFPTAVNDQITDSVTQANTKVLGDAPAVAVGNLYQATAQALAN
                     AAHNATNAQQQSYVTAQSATTMGVATLYSIDTATTAVASKEILSTRVRGLGS"
     gene            100319..100588
                     /locus_tag="QEL58_000090"
     CDS             100319..100588
                     /locus_tag="QEL58_000090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017357376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RebB family R body protein"
                     /protein_id="HDS1674619.1"
                     /translation="MAFPTAVNDQITDSVTQANTKVLGDAPAVAMGNLYQATAQALAN
                     AAHNATNAQQQSYVTAQAATTMGVATLYSIDTATTGVATKQILGA"
     gene            100615..100881
                     /locus_tag="QEL58_000091"
     CDS             100615..100881
                     /locus_tag="QEL58_000091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006446865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RebB family R body protein"
                     /protein_id="HDS1674620.1"
                     /translation="MAFPTAVNDQITDSVSQANLQVLGVAPATAMGTLYQATAQALAN
                     AAHNATLAQQQMYVTAQAATTMGVALLYAVDTGATGAATRKILG"
     gene            100942..>101201
                     /locus_tag="QEL58_000092"
     CDS             100942..>101201
                     /locus_tag="QEL58_000092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006446865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RebB family R body protein"
                     /protein_id="HDS1674621.1"
                     /translation="MAFPTAVNSQITDSVSQVNTKVLGDAPAIAMGNLFVATSQALSN
                     AAHNATNNQQQSYVTMQASTTQGVSTLYAIDTASNGVATREIL"
BASE COUNT        17517 a        33613 c        32744 g        17327 t
ORIGIN      
        1 ggcgcgctgg aaatacgcgg ctgctgcgca tcggtatcca tgcgcaggcc ctggctgcgt
       61 gcatccacgt ccagctgtgc atgcaggatc ttcaatttgg ccagcccggg tgcctggtcg
      121 cggtagtggc gcggatagct gaagcgcgcg gtcaggttca tatcgcccag cagctgcaca
      181 ccgtcaaagc tggtgtccgc atcgcggaac gagacctccg aatcgaacag ttcggacggg
      241 ccaccgcgca gctgcttgag gaacccgacc gtgccctggc ccttgccgat gatcaacagc
      301 ttgccgaacc gagcgctgcg gatgctgtcg ctgtggatgg catcgaagcg cagggtccag
      361 ccctggtcgc tgcgcggcgg tggcggaatg gcgtcctcga cccggctgat ctcggcggag
      421 accccggtgg catgcagccg gggcacccgg acctcccgct tgaacagggg aagcaccgcc
      481 aaccgggcgc tggcgcgctc ggcgtgcagc acgtagacag tgtgattgac gtggccgcgc
      541 atgtgcacgt tccaggcaat gacatggccg ggcaacagcg tgatggccgg gccggtcgtc
      601 atcacgaact tgtgcggctt gcggttggtg acctggtcga acagtggggt gttgaggaaa
      661 acgttgccgg ccagcaggta gagcgcgtag atgcccagca ggacatagcc cgcggcgcgc
      721 catcggcgaa aacggtgcgg gatgcgcgcg gaagtagggg gcatgtactg ctctgcaggc
      781 cggaattgcc tcaactattg cggaaccgat ggcggcggta cgtgaagcag ctacggccgc
      841 gtggtttgtt tctgctagtg tccgccttgg ccactacgcc gatccgcgag gaatcgcatg
      901 gaaatccggg ctgccaccgc aggtgacttc gacgccatgt gggccatctt cagggccgcc
      961 atcgcgaccg aggatgcgct gccgttcgcc ggcaccttcg aggccagcac cttccagggc
     1021 cactggttcg ggctgcagcc ggcttatgtg gcgcttctgc aagaccgcgt agtcggaatg
     1081 tacaggatgg gcgccaactt ccccgatctg ggggcgcacg tggccagcgc cacctacgtg
     1141 gtcgacccga cagtgcaggg gcgcggcatt gggcgggcgc tggtggaaca cagcctggac
     1201 cgggcaaggg cggaaagctt cctggccatg cagttcaact acgtggtcag taccaacacg
     1261 ccggccgtcg cgctgtaccg aaagctgggg tttgcggtgg tcggaacgct accggaggca
     1321 ttccggcatc gaacgctggg gctggtggac gtgtttgtga tgcaccggtt cctgtagagg
     1381 cctggagtag agcgagcatg atcttgcgaa catcctgcgt cttcgcactc tgcactttca
     1441 tgggcgcctg tgccctgcag ccaaagagca tgccaccgca ggtctcatcc gcaggctaca
     1501 catcggtcag ctcgaccctt ctggcaggct ggatctacct gcgcagtgag agctatctgc
     1561 ctggatcgaa tcttgcgtcc ggcgcccctg agatcaaggt atgcgagtct gtcgcacaca
     1621 ggatccaact tgagatctac ccgggcgtcg agccagatgt tgaaagaacc tgccggaaca
     1681 tagatgcctc cgccaccgaa gcggagcgat ggttccccaa gcgcagtacc cgctattcgg
     1741 tcatcatcgt gcctgaaggg caatccattt ccgtgagcag gtggagcttt ggctatcgat
     1801 cggcgcatct tgcgttggct gtggcggcat tcggtaacca agagagacga gagggaaatc
     1861 ttgttgatct ggtggcgcat gagacctttc atatactcgg tcgaattgcc ggggatgccc
     1921 gtgggcagga tgagtaccat gcctactacg caggcttgtg cgctcagctt gccgttcttg
     1981 ggtcgattcc cgaatctgtc ttgccaggag cgccgcttca agggggcgtg gatgaaccaa
     2041 cgcgagcatc ttcggattcg gcatatcggg tgaggcgtga agccttgctg ctgtcccacg
     2101 atggatcgat caaggcgggt gatgatggcg gcagatcact cgctctgcgc tgcatcgagt
     2161 tgcagaaggt gacagcgcgg ccggcgaagg cggatgttcg gcctgatttc gattgggtcc
     2221 cgaacggagc gacgcagacc atccactggt tgacgccgat cctgccccgg gcatcaactc
     2281 cgtttacaac agcatgtctt ctttgagctg gagcggtaat cgctagagcg agggtaccgt
     2341 gatcctctgc agatccagct tggccctgag cgcatagtgc ttgcgggtga ccggcacggt
     2401 gcaggtcagc cttggatcca ggtaatcctt gaacatcggc ggtcgcgaag cgcccagata
     2461 gaactgccga tcctgcttga ccgcggctgg caatagtacg tcggacagat cgctgtcgga
     2521 cgcatcggtc accaggcagg gtgcatggcg gaagccgagc ctgcgcagca ggtacagccg
     2581 gtgcgagcca ttggtcagga tgatccggcg gccaatgcgc gttgcgctga tgaggttgtc
     2641 gctgaaaccg agatagatga caagggcgtg gctggccgcg ccgaacggct cgtaatcggc
     2701 gatgctgcga gggtcgatcg ccgccacgtc cagaaacctc aggtcgttgg acgcagaggc
     2761 gaatgtgtag ctgccatcgg actgggtaaa gcgcacatcc ggatgtgcat ggcgtccact
     2821 tcgggccacc agctccatga tctcccgtgc atcgggtgac gcggccgtgg ccgccgccag
     2881 ctgatcgatg tggcgcaggt tgatgcactc ctggaagacc accagccggt cgatttccac
     2941 catctgccag cagcggggca ccacgctcgt catgcggtgc atcgagggct ggcggagggc
     3001 ctgctccgcc aatggctgca tctcttcggg cagggcaagg gcgtccatgg cgtcggcggc
     3061 gtctgcttcg tcctgatgaa gacgacgcac cagggcgcgg gcgtttcgcc attcctccac
     3121 cagcgtcgct tcatcaaagc gtcctggcgg gcaacgctcc ctgacgaagc ggatgaattt
     3181 cggcagcgga aacaggccct tcagcaaaag ggtgggatca aggccatcgt cattgatgtc
     3241 ggtgggcatg catctcgctc tcgtgggagt cgctgcagcg acgtccaaac tggtcggccg
     3301 tcacacaaaa ataatatgtt atatcgtaac atttgtatgc cttggcggca atcgtgctga
     3361 acaacgcagg gcgacgccgg cttggccgct gtgcatccac tgcattgcgt gggtgcaccc
     3421 actaactaga ggagatgttc atgaacgaac tgattgagct gggcgtagtg gctggagagc
     3481 agaatcacga agatcagggt gaactgatcg agctgggctc ggtggtttcc gaaacgaagg
     3541 cgcacaacca cggcacgttg tgggatggcg tcttcccgac cacctcgccc tgatccatcg
     3601 caccatgcat gacctgcggt gcatgcccct gcatgcaccg ctctgatgcc tgcagcagca
     3661 tgagatcacg ctcgcgatgg accagcctga agctccatac ttcctttcga agcacgcgca
     3721 tgtctgcgtg accggtgacg cgatggtcat tcttgaccag gcctccggca gctatctttc
     3781 catcgatcgg cgctgggcgg cggggcttgg cgggctggtg caggactggc ccctggcctc
     3841 cgacggagtg cccaggccga ggatgctcca gtcgctgatt gatcggcgcc tgatcaccca
     3901 ggatccgctg cgcggaaaat ccgcagcaag cgccgcaatc gcgttgcccc ggcactgggt
     3961 gcgcgagggc gagtcccggg gatgtccacc gatcacggcc cgcgatgtgc gccgcttcct
     4021 ggcttcggtc acgcgtgcgg catgcagcag gatgttcctg cctttcagct acacggtttc
     4081 ggcagcgcgc cggcgtggtc aggcatccac gccgggcgag gtggacctgc agcagctggc
     4141 cctcctggtt cgggtattcg attggctgcg accgatcgcc ttcaggaaga ccgatgagtg
     4201 cttcctgtac tgcctggcca tgcgcgagtt cctggggtcg tacggcatcg ttcccgcgtg
     4261 ggtgttcgcg gtgcggaccc agccgtttgc ggcgcattgc tggttgcagc acggcgaccg
     4321 tgtcctgacc gacatcccct tcaacctgcg ccggatgacg cccatcctgg tgctgcagcc
     4381 ggcgtgatcc atgtaccgat atgtcgctgt gttctggaac gatcattctg aatctgcccg
     4441 tgcgcaggcc ctgcaggcca tggagcggat cgaggtgggc cgccccggaa tcgcatgcgt
     4501 gttgaagggc agcggcggtg ccatctatgc ccagactgac agccctggct acttcgagta
     4561 cagccggtcc ggcccgctgg tggtactcgg caagctgttc cacaaggtgt tcggcgccga
     4621 taccgttccc gcccaggcag ttcccgatgc tgccgcgggc acgaccgcct gcagtacgca
     4681 gggcaggagc ctggtggagc agtactgggg gcgctacgtg gccttgggct accagccgga
     4741 taccgccagc tggttcgtgc tgcgcgaccc gacggcggag attccgtgct acatgaccac
     4801 ggccgatcag ctgacggtgg tcttttcgaa catggaagac tgcctgctgc tgggattggg
     4861 tgacttcaac gtcgactggt cgttcctgtc ctattcgctg ctgttcccgt tccgtgatgg
     4921 ccttcagaca ggattcgagg aggtcgtcgc cctggaggcg ggcgaggcgg tgacgatccg
     4981 cgatggccag ccggttggcc ggcactatca atgggacgtg gtgcggcagg ccagtgaagc
     5041 gcccatcgaa gatctggagg aggccgtgca gctggcacgc gcaacgttgc tgggctgcat
     5101 cggtgcgctg gcgagccagc atcgatgcat ccagcttcag ctgtccggcg ggctggactc
     5161 ctccattgtc ctcgccggcc tgctgcatgc gccctccgca ccggaagtga agtgcgtcca
     5221 tcactacgat gccggcattg gtgccgatga gcgcatgttc gcgcgcatgg ccattgccgg
     5281 tgcccgtgaa tcctcggggc gaagctgcga gttcgtcgag taccagcggc agccgcactg
     5341 ctcgctggaa gaaatcatgg acttcccgcg aaccgctcga cctgcacatt gctcgggcta
     5401 cctgctgcat cggcgcgacg tggatttcga cgcagatacg gtgcagttca ccggtgtcgg
     5461 cggcgatgcg gtcttcctgc gcttcaaggg caatgccgct gccatcgatt acgcgtggcg
     5521 gcgggggatc gaccgcgact tcttccgtgt tgcgttcgaa accgcgcagt cgggcgattc
     5581 gttgtacggg gtattcaagg atgccttcgt ccatggcgtg ctgaagaggc caggcagcat
     5641 caatggccgc tggggcaacc cgtgcgaatg ggtgaaggtg gatgcttctg agcaggatgg
     5701 cacgccgcct gcctggttgc ggcatgcacg tgcacagggg cacaggctct ccccgcacaa
     5761 gctggctcac atcgggcgca tgatcttccc gaccagcgtg ctcgatccgt tcgagggcgc
     5821 agggcgctgg cacggggtgt caccgctcag cgcacagcct gtggtcgaac tctttgcccg
     5881 tctgccgctg cacctgctga tggccggcgc ggaggacagg acgatcgcgc gtcgtgcact
     5941 gcagggcctg ctgccgcagg ccctgctctc gcgcaaggtg aagtgctacc tggacgatca
     6001 ctcggtcgcc gtcacccagc ggcatcagca gttcatcagg ggcctgctgg tggacggcct
     6061 gctggcgcgg cgcggctaca tcgacagcgc atcggccgac gcgggtatcc gccgggtcag
     6121 cccggatcac tcatcccagg tgctgggtat cttcggcccc caggtcaaca tcgaagcctg
     6181 gctcaggcgt tggatgggcc gacccggcgc gcctgcggtc ggcgtggcct aggcgctccg
     6241 gctcatttcc tcaaggtaga ggctctcaag atcattggcg gtgatcgtgc tggcatccag
     6301 cgtcctgcgc agcctgccag cctgcatcag tccgatggtc gtcgccactt cgcgggcacg
     6361 gaacagatcg tgggtggcca tcaggatcgc cgtgccgcgg tcgcgctggc gcacgatcaa
     6421 ctcgtggaac tcggccgaag cagtcgggtc caggccggac gtcggctcat caaggagcaa
     6481 tgccccggct tccttgatga tggccagcgc gatgcccacc ttctggcgca tgcccttgga
     6541 gtagaacccg acgcgccgcc cgaatgcctc cggcgccagc ccggcggacc tgagcgcgtc
     6601 cttcagccgt gcgggcgagc gttgctccac cgcagccagc cgcgcgaagt aatccaggtt
     6661 ttcatagccg gtcagctcgt catacagcgc cacgttctcc gggatgtaca acaggcgccg
     6721 gcgcacctgc tgtggccgct gccaggcact gagcccatca acctcggcgg atccggaggt
     6781 aggttcaagg aagcccagga acagcttgat cgttgtcgac ttgccggccc cgttcgcgcc
     6841 cagcaggcag aagatctcgc cggggcgcac cgtgaagctc acatcatcca gcgccagatg
     6901 cgtgccgtgt tccttgacca gatgcgttgc agtcagcatg tgtgatgtac ctcagggagt
     6961 gcccagccga cgccgcagca acccggccgc gatcagcagt agtagggtgg ccacggccag
     7021 tgcggccagg tcgatcagta caccgcgttg cagggccccc gctgtttcct ggaattcgaa
     7081 aaggggcagg gcgtcatact cggccagcgt ctgtggcatg tcacggtcca gatagtcctt
     7141 gtgcagttgc cgacgtgcct gccagtaggc gagaacctgc tgctggaacg ccagcgcacg
     7201 gtcggcgtcc gacccggcga ggcgatccag tgcatcctgc accgctaccg acggcagcag
     7261 caggcgcacc cggtcgagtg actggcgccg cgcatcctct gcctctgcat gggcggcgat
     7321 caagggggcg atgacctgat cggcctggac aagatcggca taggccacgc gtacggcatc
     7381 ggcaatgcgc ggcgctggcg aacgcgtggc gggtggttct gccgcgtggc gcagctgctg
     7441 ctggcgggca gtgtcggcca gctgcgcctt cagcgcggtg gccagctgca tctgtgaggg
     7501 cggcggaacc atcaggttca ccgctgccag caccaacgac ggggccatga ccacgatcag
     7561 cagccacagt gcgccggcgg cgatggcggc ctcggtggtg cgccgggcga aacagccgat
     7621 aagcaccgcc agcgccagcc agaagctgcc gtaggcgagc acgatcaggg caagcacggc
     7681 caggcccgaa gggcttgttg cacccgaccc agcggcaacg gcaacgacga tggccagtgc
     7741 aggcagcagc acgatggcgc cgcgggccga tgccttcacc gcgatcagtc gccctgccgc
     7801 gatgggctgt gacaacacca acgctgtgat gccgcgttcg cgttcgcgcg accagaggtc
     7861 gaaggtggcc gccaggatga ccaagggcag caggaacaca acgacgaagg ccaggtcgaa
     7921 tcggccagcg gcctgcacgg cgggattgcc gatgtcggac cacacatgcc tgagcagctg
     7981 ggtacggtca cccagcgcaa ccacgtcggc ggtatagggg taggcttcgg cctgtccaat
     8041 cgacaatgcc gccatcgggg cgggagggag caccggctgg acccggggca gtaccgacgg
     8101 cgccttgcca acgaaccccc ggctgcgctc cctggcatcc tgttcttccg cgtggatcaa
     8161 accgatggca gcctcgcgct gccccaccca tgcactgcca ttccaggctg cataggccgc
     8221 cagcaccacc agcaggccaa gcagcactgg caaggcccgg tcacgcagca gacgacggat
     8281 ctcatgccct gcgatcgaca ggctgctcat ggggcactcc cgagatgccg cgctgacgta
     8341 agcaccaccc ccagcgccag cagcacccag gccagcagaa tggcgacgtt caccgactgt
     8401 gccgcggcga tctggcccag cgacggcttc cgtgggctgt acaccacgga gcgggtaagg
     8461 gtcgcaatat cggccagatg cttgctgccg ttcactgcct tgtgctgttt cacttccagg
     8521 ttgagtgcct ggatcagccg gtagcgatag tcttcgacgc cccgcaggaa ggccagatgt
     8581 gcagggaaat cggtgcgggc cagtgcccgt gacgcggcct gcagcgcgag ggtgggggac
     8641 aacgccgcga aggcgcgttg cgtggtttcc tgccgctggt aggcggtgta gatgcgttcg
     8701 aagtggcgat tgtaagtttc gctggaattc gcttcagcga actccagcgc cacaccgcgg
     8761 aaattgaccg ggagatcgtc cacgtcgctc acttggtagc gtgcaagcat ctctgctctg
     8821 agcgcgtcca gccgcttgtc cgctgggtcg tggccatcgg cgccgttctc cgcgtcctcg
     8881 gtgaccgccg cccggaacgc cggcgaagta ggcgtgggat ccagcgattc ggccagtgcg
     8941 ggggccatcc gtggcgcgag cagggtggtc accacccaga aaccgagcag caccaccagg
     9001 gacgtgcgtg ctgcgctgaa gcgcgccgag acgccgatgg tgatggcgca gaacaccagg
     9061 agataaagcg cgtacgccgc gaccatcgca acgagcgcga tgatgtcggc cgtgccgagg
     9121 aggtgtccgc ccatgcccgg aaggctgacc gccagcaggg cgaggaccag cagcagcgac
     9181 gccgtcgcca gcgcgatcag ccggccaccg atcagcacat gggccgatgc gccactgccg
     9241 agctcctggc ggagggtttc gcgggcaaca tcgccggaga ggctgccgaa tccggcaagg
     9301 atgatcagca ggggtgccac gacctgcagc gtccatgctg cggaaaagcc atcgaagcgg
     9361 ctgagcgcgg cgccggcgtc gatggggcgg tgccgggccg ggttctgcgc atggccttca
     9421 atgaacaccg acgtgccaac gaaatccgag atgcccgggt caagcgccgc cagcggccgc
     9481 acaggtgcgg gaatggcgcg gccgacgtgc gcggcggcat gcggatcgat catgccctgg
     9541 ctgtcccaca gccgcgcctc ctgctccgct acgatttggc gctcctgggc ctgctgggcc
     9601 agccgtgctg cccccgtggt aaccgacgcc cccgcaagca gcagcagggt cagcgcgagc
     9661 cacaacaggc gccgctcgcg ccacatcagc ttcagctggg tcgcggcaac ggtcagggtc
     9721 tggcgcaggg ccgatgcgga tctggagaag gcgggggagg catcgctcat ggcggggccc
     9781 taccagcgat gggtcaacgt catggacagg aagcggccaa gcgccgttgc attggtcggg
     9841 tcgaaaccgg tgttgatgct gttgacgatg aagggtgggt tcctgtcgaa caggttctgc
     9901 acgttgaagg acagcgaggt gccctgtccg gcgccggcag agtcgctgaa gtcgtacttg
     9961 agattgaggt cgaccgttgt ccacgagctg acgtgggggt cggcccggtt ggcgggatcg
    10021 cgatagctgt ccacgtagtt cacgaacagc ccgccggcga cctgccggtg gctcatggcg
    10081 aggccaccgc gcaccttcag gtcgaccggg aagtacaccg tgttcaccgc gtcgacctcg
    10141 ggggaggtgg cggtcacgcg gcgcttggaa tcgatgatgt actggccggc aaggttcaac
    10201 gcaaagcggg tctggccggc gtcgaagtcg taggaggcat tgaaatcgac gccgcgttgg
    10261 gaagtgaacg cgttgttgcg gaagcggttg tcgaggatga cctcgctgct ggtttcatcg
    10321 gtacctggcg ccagggcata agggcctgcc cgcgatacga acaggcccag gccggaggcg
    10381 ccgagctggc gcgcctgctg gatctgctgc ggcgtcgggt tgacggtcag caggtccgca
    10441 tagggcgcgg tggactgcag gaacagcgac gggaagctgc caccgaagcc gctgccgatc
    10501 cggtcggcat actcgatgtg atagtagttc gcgtcaacct tgaagcccgg cagtgacggg
    10561 ggcgcgaacg agaagcctcc ggtccaggtc ttggcacgtt caggccccag atccgggttg
    10621 ccgttggaga gcatcatcag cacggtgcta ccgctggccg cgctcgggtt gggtaccttg
    10681 gccaccaccg cggtgttgtt cagctgcatg tcctggtaga ccggcgcacg ataggagcgg
    10741 ccgtagctgg tgcggaatga aagtccttcc gtcgctttcc acagcaggcc cagcttggga
    10801 ttgagggtgg atccgaaatc gctgtagtcg tcgtagcgtg cggctgcagt cagtgacagg
    10861 cgacgaacgc caggcgtgtc tgcgagcagc ggaacattga gctcagcaaa ggcggagcga
    10921 atcgtgcgct gcagatccag cggcttctca aggccgcggt ggtcgagcag ttcatagcca
    10981 tctcggcggt agcccgcacc gaatgccgcg cgcacgccgc cggccgggag attgaacagc
    11041 tcgccgtcgg caatcacttc cagatagcgc gattcggaat tcgtatccgt cggcggtgcg
    11101 gtgctgaccg aactgcccga gatggtggtt ctctcgtagg agacatcgct cctgccgaat
    11161 ccggagttca ggcgtgcctg ccactggcgc ggaagctcga gggtaaggcc ggcgaacaca
    11221 tcgaactgcc gcgtatgcgg gaacaggcgg gtttcgtcgg cggttccgga aatggtggtg
    11281 tccatctcgc gcctggcaaa ggagccggtc aggttgagcg tcagcacatc gctgagttcc
    11341 tgctcgccat ccaggtacag gctgtgccgc ttcgatccgg gatagatgtc gtacggcctg
    11401 acggtaacgt tccgggaaaa gtccttgtcg accgcagcga ggttggcctg cttcaggaac
    11461 tcgtagctgg ccatcatatg gcccccctcc caggaccagc cggcggactg tgatgcctgg
    11521 tactcgtcca tgttgccgcg ggtgacgctg ccatagcgga gcgaggtctc atagccggtg
    11581 aaatcccggc gcagaacgat gttgaccacg ccgccgacgg cgtcggtgcc gtagatggca
    11641 gaggcaccat cggtaaggat ctccacgcgc tcgatggcac tcagcggaat cagcgagatg
    11701 tcgacgtact gatagcggtt cgaggaggtc acacggtggc cgttgatcag cgtcagcgtg
    11761 gtgcccgttc cgaggccgcg caggttgatg gcagtgccct ggccgaagtt gttgccggtg
    11821 tcgcggtcga cgccgaggtt gccgacattg gcgccgttgg cgccgccacc gaagttctgc
    11881 ggcagcttct cgaagagctg ctgcaacgag ggcaccccgc ttcgatcaat ggcctcccgg
    11941 tcgatgacga tgaccgggga ggcaccgccg ccaatggcgt cgcggatgtt gctgccaatg
    12001 accatcacct tgtccagcgt ggcggtgtcg gatcgccggt ggccctgggt agggctggcg
    12061 ggagcgccgg cgtcctgcgc cattgccgga gcgttgagct ggagtgcggc ggccaggctg
    12121 gcgaccacca gtgccgccgg cctggcggtg gatgcgttgt tcatgccccg gtccatcgat
    12181 ctcatcagat gttggtctgc ggcacgagcc atcgcgcctt caatggcgat gttatatcat
    12241 atcatttgag atgcgcgacg cctcttgcgg tggcgagagg cgagggcagg cgcaccgcca
    12301 cacgggagtt actgcaccaa tgcctgaccg acgctgatga gaacgttcgc gctgccaccg
    12361 ccggtcaccg agatccttgc cgcgtactgg aaggctgatc gcaggctgct actgttgatc
    12421 gccgctagcg tcgtgctttc cagcctggcc acggtggcag cgccgtatct gttctcgcgc
    12481 ctgatcgacc gcatcagcgc ggaagacctg cgtgaactcg cggcatggtt cctgctctac
    12541 gcggtgatgc tcggtgccgc cagcatcctg cagaacaccg tgcagtacct gtcgttcctc
    12601 agtggcgaga acctgggttt catcaccagc acccgctatt tcgcgcgcct gctgaagaag
    12661 acccacagct tcttcctgga ttacaacgca gccgaattgc aggtggccgg cgagaagggg
    12721 cgcaatgccc tgaagatcgt ggtgcagctc ggcctggtgg tgttcattcc cagtgcactg
    12781 cagatcctgc tgaccttggt gacattgggg gcgctgatca acctgcaggt ggtggtcatc
    12841 gtgctgggct atggttctgt tgccatcacg ctttcggcca tcgccacccg ccgtgcgcgg
    12901 attcatcgtg agtcggcggt cgaggcaggc cagcagaatg cccgcttcgt aggcaatgcg
    12961 atgaacgcta tggagacgct gcggcagttc ggtggcagca cttggatgat ccagcgcttc
    13021 gagcagaagg cccaggaggt ccgcgacagc tggcgcgcgt acgtgctgca gcggatcggc
    13081 ttcatcgcgc tgctgggcat ctgcctggcg gtcgagttca tcgtcacctt cgcactgctg
    13141 ctcccgcgct accagagcgg ccacctgagc gtcggcgata tcgtgctgtt caacctgctg
    13201 ttgctgcagc tcaacatgcc ctttgaaatg atcgcgcgct cgatcgatga cgtcgcccgt
    13261 tcctggaccc tgctgacgcc gttgtcggcg ctgtgggcgg cacccgaaga acggcaggcc
    13321 gagaacgccg gccgattcca cggagaatgc ggccagatcg agttccagca tgtcagccat
    13381 cgttacggca atggccgcgg cgtccacgat gcgtccttcc acgccgggcg cggtggcatc
    13441 aacttcctga tgggggagac cggggcaggg aagtcgacgc tgttcaagct ggcactgaag
    13501 tcgatcgagc cccaggccgg ccggatcttg atagatggca ccgacctggc ccagatcgaa
    13561 cgtgccgcct ggcatgccgc cgtcgcggtg gttccccagg atgtcatcct cctcaacgag
    13621 agtttggctg acaatattct gttggggcgc ccccgcgacg atgcccggtt gcgtctcgcc
    13681 acccacaggg catcgatcct ggcgttgatc gacgcgctgc ccgagggctt tgaaaccacg
    13741 gtgggcgagc gcgggctgaa actctccggc ggcgaacggc agcgcatcgc catcgcgcgt
    13801 gcgctctatg gcgatcctgc gatcctgctt ctggatgaag ccagttcggc gctggacgag
    13861 gcgacggagc gcgagatcat tgcttacatt cgcgagttgg ccaaggaggt gactgtattg
    13921 gccatcaccc atcgatggag cgttgtgacc gcagccgatc aggtcatcga ccttgtgggg
    13981 gatcgaaacc agacttcgtc atgctgaact acgttcactg gaaaaccgac aacaaggtcg
    14041 gcaacgcgca ggggccggat tccggcaaca ctgtgggcgt gcgagcgcag gtttcgttct
    14101 gatctggctc tcgatctaca aagcagacga cgtccgatca aggaaacgga aaagggaaga
    14161 ggtccaaatt ctctgggtac ttgtcagcga acacgaactg acgccacgcg cggaatgcgg
    14221 actctgtagg gttgtccacg acttttgtag cggtatggtg cgcagcactt atttcctccg
    14281 gagttgctga cgccgctacc aacgtggatg cgagtctggc tatccgctgt gatcgctcca
    14341 ttgaggaaat cttctccgtg atcctctcct caaaaagttg gacaaaacag cttctgtgcg
    14401 ttgtaaaaaa atagttccgc ttggaagccc cgaacgaatt aagagcccac attgccttgg
    14461 tgagggagcg ggtcttgcag aactcgatat agaattccgt atagtcattc agaagaacgt
    14521 cttcttcaat ctcctctggc ggaccaacca aagcgaagaa aggagcacgg gcggtattga
    14581 gaacagttcg tgccatgtga ccacctgagc aggcggcgac agtcaccacc agccaccccc
    14641 tcatcatgtc attgatcttg gccaacggta ccgagagatc gggccaatcg atcaagtcgt
    14701 cattcgtaag ttggagcccg ttctcgtcgc cgtgggcttc gatatgaagt attgggtgat
    14761 ttccagcagc tgctgactgg agtacatcat tcaagcagtc actgaactcc ttcaggcttt
    14821 tcggggtgag aagcttgacc ttaagctgcc tcgtgagggc tgcgtcgcta ttttttatct
    14881 tgctggacaa gaggctgcct gtggtccggt cacccggtct cagcgactca ataatccata
    14941 tctcagcccc cataacgccc ccttttgatg tggagtctca tcacttatcg cgagtacgtt
    15001 accagcagag tagggcgccg gtacaggaga catcgcatgg ccggcggcat taccgaatct
    15061 ggtgttcacg ccgccgccga tcagttgctg gccaagtgcg agtgcccgac cgtcgagcag
    15121 atccgggctc acttgggggg actcgccgac ccttatgacc ctctggctgg tgacctggtg
    15181 aaaccgacca tcaagagctt gctgagtgag cagttggtgg ctgcccagcg tgatgcactg
    15241 aagatcagat ccgtttgcag atctcatagc tcgccgagca acgggacacc gggcttcgga
    15301 gagccgatcg agccgaggca gcgagacagc aatttggcgt gcggctcccc gcggccctgg
    15361 agacagcaaa atctgagcgg gaaggctgga ccaagtacgt cagatctgtc gagaatcgga
    15421 cgtgaagcgg tgttggtagc gcgcggccag agatggaggt actcctggcg cagccaagca
    15481 ggacatccga acgacacagg ggccttgaga aacagctgcg ccaagagatc gaagctgccc
    15541 aatcagcgga caccacggcc aggtggcggc cgggccaaga tgcttggaac ataatataca
    15601 ttatgcgaaa tgatgtatcg ggcggccgct gcctttgctg gctccgcgtg gcaatagctg
    15661 ggcctctggc tcggctcttg cctccgccct cagaccccgg ccaatccccg aggatctggc
    15721 ctggctgtcg ctcaccgtct gccaggcgca ggaatggcgt cggatgatgg aagctgcccg
    15781 ctcggcaccg tcgatcgaca gttccagaaa tgtgcgcaat cgcgacggcg gcattcgcca
    15841 tcatcccgcc accgtcgtca atctgcggga cattgtgagc cagcgcaaac agcgttcggc
    15901 ggtggcgatg gctgggcccg acgccgagcc gccagcagcg gtcctgccgg taccggggcc
    15961 gaaccgtcgc cagcgcgtgt gaggcgcttc cgtaggggcg ctgcccctac accctgtcga
    16021 ggtcatccag ccttccaagg gagctcgcta tgcgtcgcgc cacttctttt gcatcgccct
    16081 gtatttcgag gccgatgcga tcccgattca gcattgcccc caggagtaga ttccagacgt
    16141 gagcaggctc gatcggcacc atttccttaa tgtcccgcgc gtgtttaacc ccattcttgg
    16201 cttcatagag gaactccttg atttgcttta cggttctcgg gtcgcccttc tcagccccaa
    16261 atcgaatgat ttcatcaaga aatctagggg tagagtgatc gcctacgacg ctgtatccct
    16321 gaagcagggc cgcgccataa atctcttcag caacaccggc taaagtgatc actaccgcag
    16381 gatgatcccc ggagaggaac gctttgcacg ctgcgtcaaa gtgtgcatgc gccaggtgca
    16441 gtttcgaata ctgagttccg gaaagttcgc taaccacatc ctgcatgtcg agccccccaa
    16501 tggaccgatg tgacaattct agcgccaggg cggcggccct tgcggcatca gggtcgagtc
    16561 ggtcccagcc tatgagaggt ccgaccgtcc ggctagaatg cgcgcaggac gccttggggc
    16621 cgtatggaac gcgaacggca cgaaccgacc gcagagcatc acgcgtcggt gtgaaccact
    16681 cggatgcctt cacgcatcgc ccggtcatag accgacctgg caaattcgtt gtcctcaatg
    16741 atcagccagg atccggtgac gttgttgctg agcacgtaac gggagacgtc ccgcgctacc
    16801 cactcgacag cgaggcccac gcctcggcag cggtcagcga ttcccctcgc ttcgaacgcg
    16861 ggatgggtac cgagggcgac gcgttcacac cctctgagtt cggacaggat ctcggcagcg
    16921 gatcgagccg cgtaagtcgc tagcgcactc cgcagggcga caatctcctt gatggaaggc
    16981 cccgacggcg cgaacaccaa tgccagttcg gcggagtgcc atcgggtgtg gttcaacgtc
    17041 cagccgggat cagacccatc ccagagatag gcatactcat ctgccgggtc accagacgag
    17101 ttggctgcaa cgaccccgcc cagatcattc ggggatttcg gcataacctg gccgcttgta
    17161 tagcaagtgc ttgttcctga cgatattctt ctcgaagacc tcgcccatcc acgctgatgg
    17221 ctgcacatct tcaatggaga cggacaccga ttcggcggtt gacccgatgg catccttgag
    17281 ggcctgcgtc attgcgtcgg cgatgcgctg cttttcttct tcggacttgc ccgcgtagag
    17341 cttgatggca acgtgcggca tgggggtctc caacgggtca gatggcttac ggagtgggca
    17401 gcggggcctg actctgcgca ccgatgtagc catcgcaagt ggccggctcg ctttccggca
    17461 aggaattgcg ctgcagcgcc aagtatgtca catcaggatt tcactcccgc ccagaagcgc
    17521 acatccccgc agcacaatcg tacccagcgc actcccccat ccctttccta cttcgcccct
    17581 gcacgccgcg cggtccacgc atcccggata agtcggtcta aagttgatct ttcgcctact
    17641 tccaaaagca ccccaagccc aggaagcctg ctgacacagc cggcaccgct gcgtgcacat
    17701 ccggcatcgt ccgaacggcg ccatctattc gtgggagttc gaagagaagg gcaaggaatt
    17761 cacggtgcgc ggcgacggac cgttggtatt caacggcatg acccacgtca tcaatgccgc
    17821 actggatggc gtgggcttgg catacgcgcc gaaaccgctg gcgaccaagc acatcgcgca
    17881 aggcagattg gtggcggtgc tggacaggtg gtgcgtcccc ttccccggct atcacctcta
    17941 ctacccgaac cgtcggcagc tgtcgcccgc attcgcggta ctggttgggt ggttgacgct
    18001 ggatacgtga tgcggagtgg ggtctagtga tctggctccc ttgagtgtcg cgtattggct
    18061 ggaaatggac gccactttac cgccgattaa caaccctatg gcgactgctt cgccttcgcg
    18121 ggcggcacag tctttcgccc aatctccagc ctccccacat cgtccacagg cacaagaacc
    18181 gcgagcctct gtgccggatc ccacagcacg tagctatcac ccagccggcc aaccaggctc
    18241 acgccgcctt gcatcttgcc atcaaccgtc acactcaccg tgtaactgct cccgccggtg
    18301 gtgatcaccc tggcacgctc agatccaatc cagatcgaag aaatcgagac atagacaagc
    18361 atgatcagag catagatcag ccatggtgag tcctttaccg cagcaggcag taccggtgac
    18421 aggcgtacgg ctacggcaca tacgcccacc aatgctccgc ccatcagaag cggccatcca
    18481 ttcgaccacc agataattgc tcctaatcct gcaaggcaca gcactaggat cagccacatc
    18541 acggggctgg ggaccgttgt attggccgtc accctcccct caatccagcc accaagcaat
    18601 gctgtaacaa gcatgaagaa caacaccgcg ccgatgcccg caaggcctgc cagcgcaagc
    18661 tcgcttaccg caacaaactg aaagggatca aggccgaagt gcccccaata cgccttcaga
    18721 tagagggcac cttgaaccaa gccgaacgta accagcgccg aaccccagcc cgcgacgtcg
    18781 gccatcgtca gtgtcttctg cgtacgatcc atgtttcccc ttccttcaat gcagccccgc
    18841 tacatactga catgtggcgc cgcatgcagc aggactcaac tcaattaacg tgacgcgtca
    18901 cgctcgggcg gcagccagtg acacggccag aggcatctac atacaaagca tggggttgtc
    18961 gcattcgccc tgcccttgcc gccgccaacc gagcggcaac agaaaacaga actgtgtcac
    19021 gcatgccgcc gatagccttg cagcgcaagg cttcagtcgc cttgcgccat atacaacgat
    19081 tctgaaaatg ttgaatgtag tgacggcatc ggccctactg cattggcatc gcgcacaacc
    19141 gagcgtattc cttctggtgc caccaataca tcggtggccg gggctcgaaa tcccggtaac
    19201 gcgactgtag tttgcgcttg ccagccggca ccaagcttta tggtgccggc tggcaatccg
    19261 tcggccggtt ttggcgggcg gtgcgtgggg gcctcgtgcc caccggtcat agtcgcgtac
    19321 cggatttcga gccacgcatc gtccgccacc ttcgttggtg gcggcttctg cctgcccgca
    19381 aggagccctg ccatgaccaa gcgctactcc cctgccccgc aaccgatcca ggaagagccc
    19441 gcgaacggcc ccgtactgga ccggaacacc ctcattgccc tgctgcacag catcggttcg
    19501 ggcgccacgt ctgatggcca gccctggcca gagcgccacc tgatgcccgg ccgacgcatt
    19561 gccttggccg acaccgactg ctcgctggcg ggccttcgcg tggtgatgga gatcctgctg
    19621 gccgcgcagc gcgcccgcga gaacggcgag ctggaacagg atgtcggccc gcggatcatg
    19681 gaggggctga tcatggccgg gctgggactc accgcgcacg ccagcacgcg agtgcgcccg
    19741 gagggttgag tgacctggtg cagttgggcg gccacggcct tgtgcgttgg gttcgtgatt
    19801 gcggcacagg cccggtggtt tgagccaccc gtcccctcgc ctatcgcgtt ccagcgcgtc
    19861 tccaacgacc gcttctcaca gctgcgccgg caagcgatgc aattcgtgga cggtcggccg
    19921 ggtcacggct tccagttcgt ggagcggcat gaagacgcct ctttccagat tcattgcaag
    19981 ggcgtgcccg tgttgtggct ggggaggcgg ccgcagcatg tgctgctgca ggtatcactg
    20041 gatgcgaatc agcgggcgcc cgccgttctg tcgttgcgtg cgctgcttca atggcagttg
    20101 gagcccgtgg actatctgga gcaggtgctg gcgggcgtgc cggagcctgt tctgatggat
    20161 cgggtgttgc tgatgctcgc gggcggggtg cctgatgggg tgcgatgtgg catgccgtag
    20221 tcgagcatgg ctcgcctcta ctggggcgct ggctgcgctg gctgcggggg ctcgggttcg
    20281 tggatggagc cttcgagcag ggcgacgtag gtgtccaggc gggtgcgcag gccgatcagc
    20341 atccagccga cgacgtagag cagcaccatg ccgaagatca gcagcgcccc cagcagactg
    20401 acgtcgaacg cactcgccca atcaccccat ttccagccgc gaaattgcag gtagagcgcg
    20461 attaacagtg gaaacggccc gagccgctgc aggccgccat acatcatgcc catgcgctcg
    20521 atcatgttgg tgcgcaaggt gctgacgaac ttgagccgcc gctcgcgttc aactttgggg
    20581 aagcagcgaa ggtcaccaat cacggcttgc cattgggcaa attcgctgtc catctcctgg
    20641 gcatgcgaga gccgcggctg gctgaactgg cggatacccc tgcgggctgc gaagacaccg
    20701 gcaacgatga agctggcgac ctctaccaca aggcataccg tgacgagcgg agaggtaaag
    20761 gtgaccgcga cccatcgctc cggaagctgg ctgctgagaa ccccgacgag ggccgccaat
    20821 aatccaacgc gaaacgccca cgtttctacc ctgcccgcct tcgggtagat gctgtgctca
    20881 accagcccct gcacccgctg gtaaagccag tggaaggtca gttcctgcga atcggtcttt
    20941 gccggcgaat cgagtccgcc ccctgcctgc atgtccattg cgtcccctgc ccccggctac
    21001 gatgccgacc gtggcatcgt agccgacgcg cggcaccttt cagaaataga acccgatatt
    21061 gaggttcagc cgcgaatgcc agcgcgaagg tccgccgttg ttgatgccga tgccatcgcc
    21121 gccggcaaac cacatgttgc ggccggcaat ccagtcgaca taggtgagca tcacgccctt
    21181 ctgcaggctg cagccggtga cgttctgcca ggaatcgcgc accccgctgc tgtgccccac
    21241 cgggcgcgtc atgctgaggt tgttgtagca ggtcacatcg tccagccagc cgcgcgggcc
    21301 aaaggaatag gcaacgttgg cactgggcac atcggcctcg gccgcgattt caaacggggc
    21361 ctggaacgcc gacagtgcga tgcgttcgcc gggcacgttg tagcggtagc gcgcccattg
    21421 cagctgggtg gtccagccat cgcgcttcca ctgcgcatgc acggcggcgg cctggtggtc
    21481 gtgatggcga cgactgcgtg tgttctgcac cttgcccgcg aaggccgatg cgccgagcag
    21541 cagttcgccg cctgcccagt cgcgcgattg ctcgacgcgc acattgaacc gctgccgttc
    21601 gcgatacggc aacgcatcgg tctgtgccac atcgaaggaa tagcggtcgt agcgggctcc
    21661 ggttccgtac tcgtcacccg agaaccagcc gaggtgccag gtggtcttgc cggcctggtg
    21721 gatcaccaca acgcccgggt cgtagtcgtc ctcgatgccc aggtagtacc cggacccgaa
    21781 ccagaaactc tgcgagaccg tgggcagcag cccgaaaggc acctgctgga caccagcctt
    21841 cagctgcgtg gcgtcggtga actgccagcc tgcgtaggcg tgatggatgg cgtcgaagcc
    21901 gtcgtaccag cggtactgcg cggagaagaa gaaaggcccg ctgccggcat cgatgtcggc
    21961 gcgaagcagc tccagctgca ggcggctggt gggcccgtaa tcgagccagc cgtagttgaa
    22021 tcgaacggcg ccaccgaaat cgaaatgagg cgctgtgttg cggtcttcgc tggccgcgcg
    22081 cgcatcaagc gagggtgcgg ccagtgcggc tgcgatgatg atgggaactg ccttcacggt
    22141 cgcgtcctgc ctcctgttct gcgagtgaaa gcactcgatt ccagcctcgg cgcacgtcat
    22201 gcctcaacgt gaggcatgac gtgctgtggc gtgcaggtta cgcaatggag ggtgaagcga
    22261 atgtcggcca gccgtgctca catgcccaga tcagacagcc ccgggtgatc atccgggcga
    22321 cgtcccaacg gccaatggaa cttgcgctcg ctctccttga tcggcatgtc gttgatgctc
    22381 gagaaccgat gctccatcaa cccatccgct ccgaattccc agttctcgtt tccataggaa
    22441 cggaaccagt tgccggagtc gtcgtgccac tcataggcgt agcgcacggc gatacggttg
    22501 ccgctgaagg cccacagttc cttgatcaag cggtagtcga gttccttctt ccatttgcgg
    22561 gccaggaact gccgcgcttc ctcgcggccg tgggtgaact cggcacggtt gcgccagcgg
    22621 gtgtcgagcg aataggccag cgcgaccttg tcggcatcgc gggagttcca gccatcctcg
    22681 gcaagacgaa ccttctcgat ggccgattca agggtgaacg gcggcagcgg cgggcggggt
    22741 gcttcagtgg acacggtggg gcctccaagc aagtggatga acggggtgct tcgacgggtt
    22801 ttgatgactc aggcgtcagc gcctggcctg ctccaacaac acttctgcaa cgtccctggc
    22861 ggtgtctgcg gcgttgtagt cgcccatcac gcgcgagacg gtgatggcgc cttccatgag
    22921 aaccagcagc tgccgcgcca gtgcgaccgg ctgctcgata tccagctgcg tggtgagttc
    22981 cagcgtgtaa tccagcagct tctgcttgtg atgttttgcg atgtggcgaa tcggatcgtc
    23041 ggggtcgccc acctcgcccg cggtattgat gaaggcgcag ccgcgatagc cctcggactc
    23101 gaaccagccc ttgagcacgg tgaacatgcc gaggatgcgc gcttccgggc tgtcggcctt
    23161 gtcgcactcc tgttggaacc agtccagcca gcgcacgtca cgcgcgttca gtgccgcagc
    23221 ggccacctgg tccttgtttt caaagtgccg gtagatgctt ttgcgcgcca cgcccgaggt
    23281 cttcaccagc aggtccatgc cggtggcgtg tataccgttc tggtagatca gcgcctcggc
    23341 ggtggcgagg atcttctgcg cggtgtcggt gctggtcttg tgcatggctg caaggtagaa
    23401 cgaccgttct accttgtcaa cgcgcgattg gcggcgtttc gggtgcacac atccatgcaa
    23461 gacgatctat caagaaatcc ggacagttca tcacccaagc gcctgattgc aggcgcaaag
    23521 tacgcctcac cacccaccca tgagagttcc cgcatgaaca ctttcgcccg caccctggcc
    23581 gttgccaccc tcgccctctc ggtccaggcc ggcctgtccg cgcaggccgc cgaacctgcc
    23641 aagccggcgg ccatcaccag cgtcgcgcgt accgccagct acatcaccac cgccgatggc
    23701 gtgcagctct actacaagga ctggggcccg aaggacggcc cggtcgtcac cttcagccac
    23761 ggctggccgc tgaactcgga cagctgggaa tcgcagatga tcttcctggc caaccacggc
    23821 taccgcgtca tcgcgcacga ccgtcgtggc cacggccgtt ccagccagcc gtgggacggc
    23881 aacgacatgg atcactacgc cgatgacctg gccacggtga tcaacacgct cgacctgcat
    23941 gacgtgacct tggtgggctt ctctaccggc ggcggcgaag tggcgcgcta catcggccgc
    24001 catggcaccg gccgggtgaa gaaggcggtg ctgatcagct cggtgccgcc gttcatgctg
    24061 aagaccgccg acaaccccaa cggtctgccg attgaagtgt tcgacggcat ccgcaaggcg
    24121 cagatggaca accgcgcgca gctgtacaag gacatcccgt cgggcccgtt ctacggcttc
    24181 aaccgcccgg gcgcgaaggt gtctcagggc ttgatcgatg cgtggtgggc gcagggcatg
    24241 cagggcggcc acaagaacac ctacgattcg atcgccgcgt tctcggccac cgatttccgc
    24301 gccgacctga agaagttcga tgtgccgacg ctggtcatcc acggcgatga cgaccagatc
    24361 gtgccgatcg acatctccgg tcgccagtcg gcaaagctga tcaggaacgc ccggctgatt
    24421 gtgtacccgg gcgcaccgca tggcctgacc gacacgcaca aggatcgcgt caaccaggac
    24481 ctgctgacgt tcctgcagga aaagtaagcc tcttggggct ctggcatctc gccggagccc
    24541 cttgcctcac ctcacgcttt cgcagccgcg cgccatgcgg gccatgcttc gctgatgacg
    24601 cccaccgcgg acttcaggaa cagcagcgcg atgaccacac ccaccacgat atccggccag
    24661 ccacgaccgg tgagcgcgac gccaccggca gccaccagta cgccgatatt ggcggcgacg
    24721 tcgttgcgcg agcacgcaaa ggtgcttttc atgttgatgt tgagcgtgcg gaaccgccac
    24781 agcaacgcca ggcacaccag attggccgcc agcgcgatgg cgccgaagcc gagcatcacg
    24841 ccgctggaag ggggtacgcc gtttgccagc ttggcgatga cctccagcac gatgaacaca
    24901 aagaagccca ggatcagcac tcccttggcc agggctgcac cggcttccca gcgcgccccc
    24961 cggttcaccg cccacaggct caggccgtac acgatggcgt cgcccagcat gtcgacagcg
    25021 tcggcctgca gcgcgctgga gcgcgccacg atgcctgcgc cgaattcgat gaggaacatc
    25081 gccaggttga tgatcagtac cgccaccagc acgcgccgtt gcgcactgtg gagtgccagc
    25141 gcttccaggt cccggcgctt gtggccgcag cagtgatcca tgggtatctc cggccaggcc
    25201 tggcctggga ttgaaaagag gtggggtagc cgttatcaac cctgtagtcc ctacaaggtc
    25261 aagcccatgc ccgctcacct caccatcggc cagttggccc gccagaccgg caccaaggcc
    25321 gagaccatcc gctattacga aaagatcggc ctgctccagc cgccgctgcg gtcggacggc
    25381 aattaccgtt actacagcgc acaggaccag cggcggctgt cattcgtgcg ccgggcccgt
    25441 gagctgggct tttccatcga gcagatccgc gagctgatcg cctttggcga gcagcgcgaa
    25501 cacgaatgca gctcggtgga cgacgtggtg aaggcgcata tcgccgacat cgcgcgccgg
    25561 atccgcgacc tgcaggcgct gcagggcgaa ctgcagcgga tgatcggcaa ttgcccgggc
    25621 gggcgcgtag ccgattgcag ggtgctggaa gcacttcagc cgaaggccgc cgcttgacct
    25681 tgtagctgca tcaaggttta caagaccggg ccacttcgcc accgcgcggc ctgcccgccc
    25741 tgacgaccca tgaccctgtt tccccatccg cttgccctgg cgttgagcgc cgccctgctg
    25801 tccgccgctg cctcggcaag tgcgcatgaa ccacccgccg cgcacgacga ccaccacgat
    25861 gacgccgtgg agctggatgc ggtggtggtg cagtccaccc ggtcagggcg tcgcgtttcc
    25921 gacgaaccga tccgggtaga tgtcgtatcg caggaggaga tcgaggaaaa gctgctgatg
    25981 tcgccgggca acgtctccat gcttgtggcc gagacggcgg gcgtgcgggt gcagaacacc
    26041 tcgccgggca tgggggcgtc gaatatccgc atccagggca tgcgcggccg gtatacccag
    26101 ctgctggccg atggcctgcc gctgtacggc ggtcagtcat cgtccatcgg cctgctgcag
    26161 attcccccga cggacctggg cagtgtcgag atcatcaagg gcagcgcatc ggcgttgtac
    26221 ggcccggcag cgttgggcgg cgtggtgaac ctgatatcgc gtcggcccaa ggagaccgcc
    26281 gaggctgaaa tgctgctcaa tgccaccagc cgcggcggcc aggacgtgac tggctacgca
    26341 gccgggccgc tggccgagca ctggggcctg tcggtggtgg gtggctacca tcgccaggac
    26401 cgccaggacc tggacggaga cggctgggct gacatccccg gctacgagcg agccacggtc
    26461 cggccgcgtc tgttctggga atcggacgat ggagcgcgtg cgctgctgac ggcaggcgca
    26521 atgcgcgaga gtcggctggg cgggacgctg cccggtcaac gggcgcccga tgggcagccc
    26581 ttcgctctca cacagcgcac gaagcgcgtt gacgcgggtg ccgtggtcga tgttccggtg
    26641 cgcgagagcg accacctgca gctgcgcgca tcggccatgt ccaccgatca cgaccacgga
    26701 tatggccctg agcaggacaa cgacacccat cagaccggat ttgccgaagt gagctacgcg
    26761 tccggcgctg gcgccaccag ctggctggcg ggcattgccg cgcaacagga ccggttccgt
    26821 tccgcgcgat acccgcagtt tgattaccgc tacacggtgc ccgccctgtt cgtacaggcc
    26881 gagcaggcgc tgcgcgatga cctcacgctg tccggtagtg cgcgctggga tcagcatagt
    26941 gcctatggcg ggcacttcag cccccgcgta tcactgttgt tccgccctga tgcgtggact
    27001 ctgcgcgcct cgatcggcag aggcttctac gcgcctaccc cctttgtcga gcagatcgag
    27061 gccgctggcc tgtcacggct ggagccgctg agtggccttc gcacggagat cgctaccacc
    27121 gggtccatcg atgcaggcta cgtgcagggc ccgtgggaat tgaatctcag cgtgttcgca
    27181 tccgacatcg accatgcggt acgcctggtg gagtctgcga ccgccccggg tgaacgtgtg
    27241 cagctgatca atgtggcggg tgtcacccgc acccgtggca gtgaactgct gctgcgctac
    27301 cgctggcagg acgtcacggt gaccggcagc tatgtctaca ccgacgcgcg cgaacccggt
    27361 gcggaaggcg ctggccgccg cccggtctcg ctcacgcccc ggcacagcgc aggactggtt
    27421 gccatgtggg agcagcatga tcgtggccgc gtggggctcg aagcctacta caccggcatc
    27481 caggcgctgg atgacaaccc ctggcgtcgg cgcagccggc cgtatctgga agtgggtgca
    27541 ttgggagaga ttgttctggg aagaatcagc ctgttcctca acctggaaaa catcctcaac
    27601 gtccgccaga ccgactacaa ccggatgctg cggcctcgtc gcgccgatga tggccagtgg
    27661 accgtggatg catgggcgcc gctggaggga tttgtggtga acggcggtgt gaggatgaag
    27721 ttctagggcg tggtccagtg cggaagggcg atgtccgcct ccgggcagaa gcggacactc
    27781 gccctaccct cgataaacat ccctgatcct agagctggac tgcttccctg ccccattcac
    27841 ctgccaatgt ccgctatcgg cccagatcgg atccgccctg ggccgataga catcccaagg
    27901 ccgaggtcca gaatccgacg gctacggact tgcgaatgcc attgcgacgc ccctgccatc
    27961 atggcacgcg tgtcaatcag aagccgcgcg agagcccgat gaacagcgtt gcactcccgc
    28021 tggtgtcgcg ttcgatcaag gggctgtcgg tgatcttgtc cggcaggaat ttgtactgcg
    28081 caaagcccat cagcatccat ttctcgccca gcggcctgaa gtagctcaca cccacatgcg
    28141 ggatggttac cgcgcccggc ttgtagtcga ccacgccgcg cgccacctct tccttcaatg
    28201 tgccgtagta atagttggcc atgtccttgg attgccacgt aacgcccgca ttcggggtaa
    28261 gccggccctt gcccagatca aagccgtagc cgtactgcag cgagaactcc tgcccgccgc
    28321 tggtgtcggt ggcatcggcc agcagttctg cctcaagttc gccgccacgg ccggaccact
    28381 tgaccttggc acccaggtcc aggcccatgt cgcgatcgtc cagcaagcgg tagtccagcc
    28441 cgttgcgtgc cagctcgctg cggcccaggt ccttcacggc aaacccatcc atgcgccctt
    28501 tggctacagc ggccagttca aaagaatcgt tcttgagcaa tacccagccg gcgcccagcc
    28561 cttcgaagta gaaccgctcg ccgtggtagc tcaccagcgg gatcggcatc acgcgggtgc
    28621 cttcaccggc ataggggctg tctgttacca cggctgccag gcccagcccc cagcgtgggg
    28681 ggccttggtc atcgggaccg ccgccggggc cctcctgcgc caacgccgcg aacgacagac
    28741 tgcaggccaa tacgggacag agaaacttga tcatgggacg ccagacctca ccaggaagag
    28801 agcccgctgt tgcgggagag gccgcgctga atgcacgcgg ccggttccag gtgagaatga
    28861 agtggcgatg tcgccgcaat gtcgtgggtg gagctcagcg cattactagc cgctgtacga
    28921 tcagggcacc tcgactacgc tggctgacac atccagggta gcgcgggtgc cgcgggtgcc
    28981 tgagtcgatc cccagtgtcc agcggaagcg ctcgcagatg cgcccaatca ggaacagtcc
    29041 cagtccctgg ccccgtatcg gagccggttg acgaaggctg tcccggtagc gtcgcgcggc
    29101 ttccaccggg tcgaagccac tgcccgaatc gatcacagcc accctgccct gcgaaagcac
    29161 gatctctacg aatcccacat cggtgttctc gattgcgtta cggatcaggt tgcttaccgc
    29221 aatgcgcacc atcgcttctg gggcagcgac gaaggtcggt tccagcgcgc caaggcggag
    29281 ctgggcatcc ttgccgcgaa gcaggtattc atgatcgagc accaggcgcg gcaggaaatc
    29341 atgcagtgcg gttatctccg cgtcttcaac gcctggtccg gcttcacggg ccaggtagag
    29401 caacgcgacc atcgtttcag acaggtcctc caccgcgtac tcgatgcgta ccagcgccgg
    29461 ctgcgaggca gctggcagcg gaagctgccg cagaacatca gccgccccgg caatcaccgc
    29521 aatgggagtg cggaattcgt gactggcctg gtccaacagg ctgcgctcac gctggatgaa
    29581 ttgagccacg cgctccaggt gcgcattgct ggcctgcgcg atcacctgta tttcttctcg
    29641 cggatagtct gtgggcaggc gcgcgccggc atcgctggga tcgatggcct gcatgcgagc
    29701 agcgaggtcg cgcaccgggc gcacgaggtt ggcatgcagc cagacgatga agccaccaat
    29761 gaccgcagca aagcacagga tccaaagcag gctgaggcgc gcgtaatggt tctgctgctg
    29821 ctcaaggggc tcgatgttca ctacggttac cagcctgccc tgtggcaggc cagccactac
    29881 ggcatggaag gtctccccac tatccaggtt caccgcatcg ccaaagagcg acgcttcgga
    29941 cgtgtagatg cccggcggaa ggtgggccag ctggcgcggc aagccggacg gaacgacgcc
    30001 ttcgcgcagg taccaggagc gcaccagtcc ttcgctgggc agtgcgtctt cgtggccgct
    30061 gcggacccgt tctgcatggt cgtcggagat cgcgcgggtc agatcttccc agtagcgatc
    30121 ttccatcaac agttggccgc tgaagctctg tactgcgatg gctagcaata ccagtagacc
    30181 gagcaggatc agggcaacgc tggtccacca gtgaacccca cgcaggcgcg gaggactatt
    30241 cacctgggct caacctgtag cccgacccgg ctacggtatg cagcaacggc gcttcttcat
    30301 tctgttcaag ggcgcggcgc aacacgtaca tatgtgagcg cagcagatcg gtccctggcg
    30361 ccacctcgcc ccaggccacg cgctccagct ttgcccgggt taccacctgc gggctctcgc
    30421 gcatcaacag ctccagaagg cggcggccgg tacgggtcag gctgattttc ctgccggccc
    30481 ggtgcgcctg cagggtgcca aggtcgaagg ccaggtcgcc cacccgcagc acgttgtcgg
    30541 tggcgccggc atggcggcgg cgcgccacca gcgaacgcag ccggacctcg atctccggta
    30601 gcgccaccgg tttcacaagg tagtcgtcca gccctgcctc gaatccatca atcttgtcag
    30661 ccacctggtc gcgggcggtc agcatgatca ccggtacgtg tttctttgcc tcgccgcgca
    30721 ggcgccgcaa cacggtcagc ccgtccaggc ggggcagatt ccagtccagg acaatcgcgt
    30781 catagtcctt ggacgaggcc aggtgcaggc cagaaagacc gtcgggtgcg gcgtccaggg
    30841 tgtgtccgca ggcttccagg aagtcgtaaa ggttcgccgc aagctgcgcg ttgtcttcga
    30901 ttatcaggat ggacagcgat tccctgttca tgacatcccc agtaggccga acagcctcaa
    30961 gagaaaccct atcacgccaa tgatcgctgc gaagagaagc agcagcaggc cggcgttgag
    31021 caggtacttc aatagcgtat acaccaggcg atgccgatgc ttgagcgcca ccccgacctc
    31081 gcggaggggc gccagacggg cgaacagcca gctgatcggc ccctgccggt cttcgggtgt
    31141 attgggcacc gtcatcgccc aggcgagtct ggcatagagg cggttgaagg cacgccccag
    31201 caggttcatc ggacgctcca catcacacat caggatcacc cgattcgtgg tgctgtcgtt
    31261 gcgtgcgaag tgcgggtagg tctcgtcgaa aacaaagtct ccgccattgc gccaggttat
    31321 gaagtggccg tccacgcaga tgtagcagtc cgccgtgcct ggcgtatcca gtcccaggtg
    31381 ataacgcagg gagcaggcaa gtggatcgga atgcatgctc agctccgcgc ccgcaggcag
    31441 caccgagaac atcgcggcac gaatccctgg tatgccctcc agcagccgca ccgtggccgg
    31501 gcacaggcgc tctgccgacc ggtgtggatc ggcgtaccac ttgagataga acttgcgcca
    31561 gccgcgcttg tagaacgtac ggaaaccaag atcatgatgc ccggccgacc ccggtgccga
    31621 cgccgcttcg aacgcgccgg acgcatgcag ttccattgct tcgtcgcgga tccttcgcca
    31681 gttgcggcgc agccgctcga tgccctcaat gtaatgcggt ttcagtaccg gttgccgcgc
    31741 ctcgcgtgcc gtggccatgt acagcaggca gttgagcggt gcgaacactg gccagctttt
    31801 gcgcaggtac tgcgaaaacc cctggtatcg ctgctgtcca cggaagcggt agacatacag
    31861 gatgcacgcc gagatgtaga tcaacattcc ggccatcacg atcatcatga caatcatgct
    31921 gatactccca acgaaccagc tgtaccagcg acgacaggac gcgttcgcct gcgcagacct
    31981 ccgaccaggt cgtccatcgc gcagtaggcc accgggatga tcaacaggca cagcaccgtc
    32041 gatgtcagca ggccgccgat caccacaatc gccatcggtg cgcggaaact cggatcagcc
    32101 cccaggccca gcgccaccgg caacatgcct gcgcccatcg caatggtggt catcacgatc
    32161 ggtcgcacgc gcttgcggca ggcatccacc actgcgcggc ggcgattcat gcccaactcg
    32221 cggcgcgcga tcacgatgta gtccaccagc aggatcgcgt tcttggtggt gatgcccatc
    32281 agcatgatca agccgatcat cgaaggcatc gacaggctct gcccagtcag caacagcgcc
    32341 acgaacgctc ctggtattga caggcacagc gctacaagta ccgtcagcgg ctgcgcaaag
    32401 tccttcagca gcagtaccag caccatgtaa acgcacatta ccccggcagc cattgccatt
    32461 ccgaagcccg ccagcagttc gctcatggct tcggcatcac ccgcgggcgc catcgtgatg
    32521 ccgtgcggca gccgcgacag gctcggcaat gccattgccg cacgttccac atcgcccagc
    32581 ggcagtccat tgagcgcgac cttcaggctg atgtttctct gccggtcgta acgggtcagc
    32641 tcggcggggc cggacagcag cgccaggtcc gccacgctct ccaagggcac cggaccgcgg
    32701 accccgggga caggcaatcg gcgcagcgtt tccaggtcgt tgcggccgct gtcggccagc
    32761 ctcactacca ccggaacctg ccgctcgctc aggttcagtt tggccaggtc ctggacatag
    32821 tcacccagcg ttgccacgcg cagggtatcg gcgatcgcgc gggaggtgac tcccaggtcg
    32881 gcagcgcgtg cgaagtcggg acgcaccacc agttccggcc gcaccagtgc agcggaagac
    32941 accacggcac cgatgccggg tatgcctcgc agttcccgct caacgaggcg cgcatgatcg
    33001 accaaccgat cgccgtcgtc ggcgctcaga accagttcga gcccttcgct gtcgctgccc
    33061 acgctgacgc gcgcgcccgc cagttggcgc agttccgtgc gtagctgccc ttcgatgatt
    33121 gaacgggtaa ggccattgcg ctcactgcgc gccaccaggt tggcggtgag tacggccgtg
    33181 gctacgcttg ccgtgggtgc agcttcgccc gggtctccgg agccgccgct acccccgcct
    33241 attgaggtgt gcaccgaggc caccatcggg ctgcgcgcgg cgatctcgcg ggcgctctcg
    33301 gccagcccaa gggtgtctac cagggtgctt cccgggggca gggccaggct gatctgtacc
    33361 tggttgccgt catctggcgg catgaactcg cccggcagct gcgcggccac cagcatgccc
    33421 agcgcaacca tcgccaccgc actggccagg gtcaacaccg gccgatgcat gcaggctcgt
    33481 acccactgca gatagcgcag tacccagcgc ggctccttgt gccgcttcgc cggcgccctg
    33541 agcaggaagg cggccatggt cggggtgagc atccgcgcca ccagcaggga gaacaggacc
    33601 gctaccgctg cggtccatcc aaactgcagg aagtactggc cgacgacgcc ccccatcaac
    33661 gaggtaggca ggaagaccgc caccagcgtg agggtggtgg cgatcaccgc catgccgatc
    33721 tcgttggcgg cttcgccggc tgcgcgcagg ggcgtcttgc ccatcaggag gtggcgctcg
    33781 atgttctcga tctccacgat cgcatcatcc accagcacgc cgacgacaag tgacagcgac
    33841 agcaatgaca ccgtgttgag cgagaagccc atcagatgca tcaccgcgaa cgtcggaacg
    33901 gccgatagtg gcaaggcaat cgcggcaatg aaggtcgcac gccagttgcg caggaagctg
    33961 agcaccacca ccaccgccag caccgcacct tccagcagca gcatcatcga gccgcggtag
    34021 ttctccgcca cgggcccggc gtagtccacc gcctgttcga agtgaatctg cgggtagctc
    34081 tcctgcaggt cggcaataac ggactgcgct gctctggcca cctccagctc gctcgcgccg
    34141 cgcgagcgca gcacattgaa cgaaactgcc gggcggccat ccatcaacgc agccgtacga
    34201 ggctcggcca cggtatcgct tacctccgcc acctcgccca gccgtatgcg gcggccgtcg
    34261 gtcagggtga gattcatgtc ggcgatgcgc tcggcggaat ccacggtggc gacagtgcga
    34321 actgacatct ctgcacgccc gagagccacc cgcccaccgg aggcctccag ctgcagctga
    34381 cgcaactgat gggaaacatc ggcagcggtg gcattcaacg ccagcagtcg gccggggctc
    34441 aacgccaccc gaatttcgcg gtccacgccg ccaacgcgcg atactgcacc tacgcccgcc
    34501 ttgcctagca ggcgcttgct tacctggttg tccacgaacc aggacagcgc ctgcatgtcc
    34561 aatgtggtcg agctcagcgc ataggtcacc accggctggc tggccagttc cgccttctgg
    34621 ataaacgggt ctcgaagttc ggcgggcaga tccgcgcgga caccggccac cgcgtcgcgt
    34681 acgtcatcca ttgcctcttg tactggtttg ccgatgtgga actcagcgct gatggtggcc
    34741 acgctgtcgg ccagcgtcgt cttgatgtgc tttatgccct gccgattggc cagagcatcc
    34801 tcgatcctgc gtgcaacgtc gttttccagt tgtgctggtg aggcgccagg tagcgttgcg
    34861 gtgatggtga tgatgggaaa gtcgatatcc gggaaattct gtaccttcat cgccgcaaag
    34921 ccgaaggcac cgaccaacgc aagcgcaacg aacagcagcg tcactgccac cggattgcgg
    34981 atcgaccagc cagacacgtt gaggttcatg agtgcgaggc cttacctgaa gcaggtacgc
    35041 tgataacccg cacgaagtcg ccgtcattga ggaaaccaag accagaggcc accaccgcat
    35101 cagacggttc aaggcctgat acaacttcca cccggtccgc gctgcggcgg cccacctcaa
    35161 cacggcgagt gagtaccctg ccgtcctgcc ctacctgcat tacgtaattg aagccatcgc
    35221 ggagcagcac cgcagcttgg ggaagtgtga acatgccctc ctcgccgacc gcgatgtatc
    35281 cctgcacgaa tgcgcccgca cgcaatggcg cgccggcagg aagatccacg tagaccagcc
    35341 cgctgcgcgt ggcgacgtca atcaccggcc cgagcgcacg tacgcgccct tccagagatc
    35401 cggctcccgg tatgctgatg ttcaccgtct ggccgggccg catggcgagc agatctgccg
    35461 atgccaccac tgcacgccac tccaggcgcc catcccggat caagcggaac agttcctggc
    35521 ctgctggcac caccgcgccc acggtggctg tgcgggcact gatgatcccg tcgctgggtg
    35581 ccagtacccg agtctgcagt agccgtaggc gggccctctg cactaccgcc cgcgctgaat
    35641 ccaggcgcgc gcgtgtagtg agcgccgtgg cctggtactg attaagctgc tgccgggcaa
    35701 tagcgccgga ggcatccagc acctgagccc gctgcaggtt ggcggcagcc tggctcgact
    35761 ctgcagcagc cagtgctacc gctgcagccg cctcgcccag ctcggcctca atcaggccag
    35821 gattgaagct cgccagtagc tggccgcgtt gtactgtgtc gccgacattc accttcacat
    35881 cggtaaggcg caacccgtta gcctctgcac caatgctggc ttcttcccac gcagcaacgc
    35941 tgccagtagc tggcgcgtgt acttgcagcg gagtgtgcag cggccgcacc agatgcacgg
    36001 agattacggg ggcaggcgca gggacgggcg ctgcatcgtc ctcggcaatg cgcacccagg
    36061 cgatggcaac agttgctgcg gccaaacaca gccccgttgc gagggcgaat cggttgcgtt
    36121 tcatggctgg gcgtcctcga gcctgcccgt tgagcggtca ggccgacacc gggcgctcct
    36181 caccggcatg gtgaagcgtc agcgacgagg atggccggcg cgtgtcgttc aaatgtcgtg
    36241 gatgcaggac agcgagattg ggcgcaacgg tgccgcgagc gatcagcggg gcaccaagcc
    36301 tgtgagatca cttgcgaaga tcatcgtgat tgctcgccca accccgatgg gcggtccaga
    36361 tctcctcctg cttctacgcg ctgacggttg cggggtaata ttccatcgcc cgctaccgtt
    36421 gtggttgatg tgggcttccg ctagcgcggc gcttgaacag taaaaattct ctctgcgcca
    36481 ttgaatgatt caatcgggag ctgcgatgtg tgcactcagt gaggtcagtg ccctgctatc
    36541 aagactgcag ggtcaagttc gagttgagga tccagtcgta cgctacctgg gcgcgctctt
    36601 tgccgaactc gcgtactacc acgttccgga agcggagctc gatgacagca agcgcgccct
    36661 tctgatccct tgcgagagtt accaggatct ggtgcagtcg ggaagccgac cgaacgtgct
    36721 gaagttggtc aaccaagtag aaatccccga gtcggatacg ttcatcgtga ccagccccgg
    36781 ggtcatcgta gtcggagtgc gcgttcatcg aacgctgttc ttgggctttc gcggcacaca
    36841 atttctgttc gattggtcaa tcaacctgcg ctcatccagg gtaagtctat ctcgatgggc
    36901 cgggcggagt gatcggtttc atgaaggctt tgcgatggaa gccatccgga tatcccaaca
    36961 gattgatggg aagctcttcg aaatggggag aggttcgttt gacaatgtcg tctttagtgg
    37021 tcactcgcta ggtggtgctg tcgccgctat cagcgctttg atccttgaat ggccaagatc
    37081 ggcggtctgt ctcatgggag cgccgcggta ctgcaatctg tctgcgcttg cttcaggcta
    37141 tcggcaactg ccgatgcagg ttcgtcgtgc tggcgatgga gtgcctaccg taccgccaag
    37201 gtttctcggc tacgcggacc atctccggca gatcagtacc gacggcagcg catattcaga
    37261 accagatcac tttagtggtt tgtttggcgg tttcgttcgt tgggcggctt ttctcgtgtc
    37321 tggggccaag tctcatagcg tggaaagcta tcgcaaggaa atgggacgcg cggcaggtgc
    37381 ggctaaggct gagtcggatc tgacgtggca cccacgacta accaatgctc atgtgaggaa
    37441 gtcgaagtca gctccttgat ttctttctgg gccttcacgc ggtggttctc tacttgtaaa
    37501 ccgccgcgcc gggatgattg cacaccggat ttcgagcctt gcaccgcccg cgacctttat
    37561 cggtggcggc ttctgcctgc ccgcaagcag cgccgccacg accaagcgct actcccctgc
    37621 cccgcaaccg atcctggaag tgcccgcgaa cggccccgct ctggaccgga acgcccgcac
    37681 taccctgctg cgcagcatcg ggtcgggcgc cacctccgat ggccaacctt ggccagagcg
    37741 ccacctgatg tccggccgac gcatcgccct ggctgacagc cactgctcgc tggccggttt
    37801 cctcgcctgg cgcaggtacg cgatgtggca tgcgttagtc gagcatggct cgactctaca
    37861 gatgcgctgg atgcaccagc gccgccccgg gtcagaacga aacctgcgct cgcacgccca
    37921 cggtattgcc ggagtcaggc ccctgggcgt tgccgacctt gttgtcggtc ttccagtgaa
    37981 cgtagttcag catcaggcgc gaccagttgt tgaggtacca gttcaccccg agcgtccatg
    38041 ccgtgccctc gccgccccgg gccgcatcga gaaagtcgta gcggtcatag cgcgcggcca
    38101 gctcgaaggc gccaacgcca ccctcctgca ccggacgcaa tacgcgcgtg gtaccccaga
    38161 ccccagagcg gctgctgaat ccggggcgct cgccggtaat cagccagcct gcgtagaccg
    38221 atgtcgcccg ctggtcgacc gagtcgaccg tgcgtgactc gatggtgcgg gtggtgtgtt
    38281 cggcgaaggc ccacaccggg ccgtagactc cgcccagctc aagcccccag gcgcggttgt
    38341 cggtgacgtt ggcgatggag ctggccgaca cgcgcacgtt gccgttccag cccagcgcga
    38401 tcggagaggt cttgttgatg ctgccgacat cctggccaag atcctcgtac cagtaccagc
    38461 cccccagatg cacgaagcct gcctggccac gcaatgggtt ccagtgtgcg cgcagcagat
    38521 acgcaatggt gtcgctggcc gtgctgtcat tgccgatatc gtcaccggtc accgccacgc
    38581 tggcgtgcca gccatcgccg atcaccttgg tggtgacgcc cagcccgtag tacccgctct
    38641 gctgggcacc gaccgacgcc accgcattgc gctgcatgaa aggtgtattg acgccgctgg
    38701 tgccaccatc gatcccacgg tccttgagct tgttgcccac gtagatttcc gttggcaggc
    38761 cacccagccg cgtgtcccag gacagatagg tgtccttcag cgagacatcg ttgcccgcaa
    38821 agtccgcatc gatcttgtag cccagtggtc ccatccgacc ttcggcaccg aggcggccgc
    38881 tggccaggtc ggtgccggtg atgttgcgtg cgtcgaatgc ggaaccgtgg gtactgctga
    38941 aatcgaccat cacccggccg cgggggtgga aggtgaactg gccatcactg ctgcggaact
    39001 caggtccacc cttgcgccag cgcagattgc cgtcaccgcc tcccccggtt gcggcgagct
    39061 gtgccacctg cgcctgcaga atggtcatgt cgtcctggcg ggtgtcagcg atggccgcag
    39121 ccacctgtgc atcgaggccc gcatcgctgc cgggtgccac gctggtactt tgagaggccc
    39181 cctccagtgc agccagtcgt gcgctcagct gctccagcag ggatgcctga tcgcgcagtt
    39241 gctttgcctg ctgctgcacc tgcgcacgca atccggcttc ggtatcgcta gccgaggcca
    39301 gcacagaggg ggaagccagc aacaggcagc cgccggcagc cgcgccaagc gcggcacgct
    39361 tcagtgagtt catgcagttc tcccgaatga aatacagtgt gcggctcagt cgcccgcgcc
    39421 atcatcgtcc agcgagcgag gtggctgagc agcagcggcg ggtatcgcgc tggcatcgtg
    39481 cggcggcagc cgcacaggcg gcggcccgag gtagccgtgg ctgcgtgccc agttggcgaa
    39541 aagccgcggc cactgcgcca ccaatgtccc gggcttgccc aacccccagc tgtggcctcc
    39601 ggcttcgaac agatgcagct ccaccggaat gcctgccgca tgcgtggcct ggtacatcgc
    39661 cacgctgtgg ccgacatcca cggtgcgatc gtccacggcc tgggccagga acaccggcgg
    39721 catgtccttg cggacgtgtt gttcgaccga ataggcctgc tgtgcgtcgt tctggctggc
    39781 cagttcccgc ttcgaccggg tgtggtccag cggcgggcgc attgaaacga ccggatagat
    39841 catgccaagg aagtcggggc gcgctgacag ctggtcggct gcatccacca acggatacaa
    39901 cggggcatcg aagcgcgtgg cgacgatacc ggccagattg ccgccggcgg aaaagcccaa
    39961 tgcgccgatg cgctccggat cgacccccag gcttgcggcc tgcgcgcgca gcagcctcat
    40021 ggcgcgctgg ccatcctgga agggcgaaac cggcgcccac ccatcggcag gcagacggta
    40081 gtacaccacg gcggccgtga cgcccagcga ttgcagccac tgcgccgtcg gcttggcggc
    40141 gctgccaatc tggatgcgga agtagccgcc gccgccgaaa atcaccacgg ctgttccgtt
    40201 cggtttcagc ggtcggtaga tctccatgcg cgcgttactg actcccgaga ccgcgccctt
    40261 cgcgctgcct tcggcgccga tccgttccgg gccacgcgcg cgttgctgcc agtggtcctg
    40321 cggccacagc ggaatcacct cgggtgccga tgcaggcggc gctgccggca ccgcaccggc
    40381 aagcaaggga ttcagcagga acagaagcac cgccaaccca cgcagcttcc ccacatgcag
    40441 actcatatca cgccctcccg tcggccttta cggggcgaag tgtgcgtcga gtcgcgctgg
    40501 cctcctatag ccggatggga ctagctgggc cgtgctcttc tgtgtgcgct gcagcatcaa
    40561 agtggatgct tctggctgga gcgtcaccag aggattcgcc attacacgct tcgccaggcg
    40621 ttcttgtttt cccgcccctc cccgctccag caaccggctt tgctgcagga ggcgctgctt
    40681 ccatgggaag cgactggctc gagggtcagc cgagcatggc tcggctctac agtggagcca
    40741 gctcgcgcgc aaggaacggc gccgtcctgc tgcctttggc ccgcgccacc tgctgcggcg
    40801 ttcccttcgc gacgatggtg ccccctgccc cgccagcgcc ggggcctaca tcaatcaccc
    40861 agtccgcctg cgcgaccgcg cgcatgtcat gctcgatcat caccacggta ttgccggcgt
    40921 ccaccagccg ttgcagctgc accagcagcc ggtccgcgtc ggaggcatgc aggccggtgg
    40981 tgggctcgtc cagcacgtac agcgtgcgcc cgcgctggct gcgctgcagc tcggtggcca
    41041 acttgatgcg ctgggcttca ccgcctgaga gctcggtagc cggctggccc agcctcaggt
    41101 aacccaggcc gatttcctgc agcaactgca gcgggcgggc gatggcatcc tcttcactga
    41161 agaacgcacg cgcctggtcc accgtcatct gcaggacttc ggcgatgttg cggtcattcc
    41221 actgcacctt cagcgtggcc tcgttgtagc gcgcaccgtg gcaggtggga cacggcgcat
    41281 agacgctggg catgaacagc agttcgacgc tgacaaaccc ttcgccttcg caggtttcgc
    41341 accggccctt ggccacgttg aacgagaaac ggcccgcgtc gaaacggcgg cggcgcgcgg
    41401 ccggtgttgc ggcgaacagc ttgcgcacgt gatcgaacag gccggtatag gtagccagat
    41461 tggagcgcgg cgtgcgcccg atcggcttct ggtcgacctg cacgacgcgt tggatggcgt
    41521 ccacatcgcc ggccaggcgg cctcgcgttg cttcaatcac gctcggcccg tcggtgggtt
    41581 cgctgtccgc gccctcgtcc accggttcgt gtcccaggtg cagcagcatc agctccggca
    41641 gcgcctgggc catcaggctg gacttgcccg agccggaaat gccggtgacg gcggtcagca
    41701 accccagggg cacttgtgcg tccacaccct gcaggttgtg ccgatggatg ccttgcagct
    41761 gcagccagtt gccggcgctg cgctgacggc tggcgggcgc aggcacctgg tcgaaaagat
    41821 accgggccgt gcgcgagtcc tggacgtggc gcaggccgtc gggctcgcca ctgtaaagga
    41881 cccgtccgcc gtgctcgccg gcctccgggc ccacatccac cagccactgc gcgcggcgca
    41941 tcagctccag atcgtgttca accacgaaca ccgagttgcc gccgtcgcgc agccggtcca
    42001 gcgcgtcgta cagcgcctgg ctgtcggcgg gatgcaggcc cgccgagggc tcatcaagca
    42061 cgtacagcac gccgaacagc aacgagctga gctgcgtggc caaccgcagg cgttgcagtt
    42121 cgccggccga cagcgtgggc gtggcgcgat ccagcgagag atagcccaag cccagttcac
    42181 gcagctggcg tacccgcgcc atgactccgc ctgccagccg ttgtgcggcc aggcgcttct
    42241 cttcggacag agccgaagtc agccgcacgt cgggggcgcc ggcgtgggtc gcttggccac
    42301 tcgcggcccg acgggcgcga tcgcggggcg tcgcgctcct gcgggtgcga gcgcccttgc
    42361 tgtgcgcgct gaaatcacct tgcgcgaccg gctccagcag gtcggccagc tggtccagtg
    42421 gcagccgcat gaactcgccg atatccacgc cagcgaaggt gaccgacaac gcctccggct
    42481 tcaggcgctt tccgtggcag gccgggcaca gcttgccttc catgtagcgc gacacgcgct
    42541 tgcgcatcag cgcgctctgg gtgttggcaa aggtgtgcag cacgtagcgg cgcgcgccgg
    42601 tataggtgcc catgtagctg ggttcgagct tgcgcttgag cgcggcgcgg gtctctgcag
    42661 gggtgaaccc ggcgtagaca ggcacgctgg gcgcttcttc ggtgaacagg atccagtccc
    42721 ggtccttctt cggcagcttc ttccacggca cgtcgatgtc gtagcccagc gtgaccagga
    42781 tgtcgcgcag gttctggcca tgccaggccg gcggccagga tgcgatggcg cgctcacgga
    42841 tcgtcagcga cgggtccggc accatcagcg cttcggtcac ttcgtagaca tgccccaggc
    42901 cgtggcaggt gctgcaggcg ccctgcggca tgttcggcga aaagtcttcg gcgtacagca
    42961 tgggctgatg ggccgggtag gtcccggcgc gcgagtacat catgcgcacc aggctggaca
    43021 gcgtggtcac gctgcccacc gatgaacgcg cattgctggc accgcgttgc tgctgcaggg
    43081 ccactgccgg cgggaggccg tcgatggcat ccacatcggg cacgcccacc tggtcaatca
    43141 ggcgccgtgc atacggcgcc accgactcga agtagcgccg ttgcgcttca gcgaacacgg
    43201 ttccgaaggc cagcgatgac ttgcccgaac ccgagacacc ggagaacacc accagtgcat
    43261 tgcgcggaat ggagacatcg acattcttga ggttgtgctc gcgcgcaccg cgcacctcga
    43321 cgcaaccgct ggcggcggca gcgcatgacg actcgccaaa gggggtgttg gacatcgttg
    43381 cgatcctgca ggcagtgagc ggcgcgcgcc agggcgcgcc caggggtgca ttttcgctcc
    43441 tgcggggtga atgtggtgag ggcgagccgt gcccctgccc tcaccccggc cgcagcatcg
    43501 ccacccacac tcccatcagg gcgctccctg ccgccacgac cagccacacc ttccccacgc
    43561 tacgggcgct gaagatgccc acggcgacgg cgatcaacag cacgaacccc agcagcgaac
    43621 tggtcaggac cgaaacggac gtgcgtacat tcaccagcga gggcagcaac agcgccagtg
    43681 ccgtggcggt aagcgcggtg aacacgtagc cccccaccga ggcagccagt acccggctcg
    43741 cgacctgcca gcgatgggcc gcgccctgcc cgggggcggg cttggcactg cgcgcggcct
    43801 cgtgcgtctg tggccagcgg cgctgcagca tcagggccat tcttgccagc atcaacccga
    43861 aggccagggc gaccagctcc acgccggcct gctgccatgc gccgcgctgc aggtacatca
    43921 gcagcccctg cccggtggtt gccagattca ccagcggcag tgccaggcac agcgcggcgg
    43981 ccagccacaa ctgctcgatc caggccaggc gcggtggacg ccacagtgca tgcagcaccg
    44041 aggccgcgca ggttaaaagg aaaatgcgta tctcccacgc gctgcgatcg ctcatttcca
    44101 gtggcagcaa ccgattgccg tgcaggtaga cgatgcttgc cagtgccacc ccggccagcg
    44161 atgccacgtt gaacgcctcc acgcaacggt agatgcctgc cgtggcggcg ccgaactcat
    44221 gctcgctgcg cttgcgccgc ttgagcgaga acagcagcgt gccgatggcg atcattgccg
    44281 tgcccagcag gccgctgatg aagtacagcc acttcatcgg ccagccaccg aaatcggcct
    44341 tgtgcagtgc ttcgatggtt tcgtgtacct gcacggcacc cagttgctgc ggatgcgctg
    44401 catgctgctg caggagcctg ccgctggccg cgtcgaaggt cacccggctg gcctcgctca
    44461 acaggtgcct gccggtgttc cccgctgttt tgcggccctc cacttccacc acgctgtgca
    44521 cggtgcccgg cgcttggatg gtcaccagtg ccggcggctg accgctgatg gcctgcgccc
    44581 gcgcaagcag gtccggcagg ttcgacagct gcgcgcccgc aaccaggatg ccggccggga
    44641 caggtcgcgc aggtgccagt tcggcttcat agcgcgcata ggcgtcatcg gcatcgccat
    44701 aggctgcctg caccggccac ggcagatagc tgctgtagaa gaaggtcaac ccggtgtagc
    44761 cgatcatgaa caggaacggc agggtcagca cggcactcag gttgtgcgca tccagccagc
    44821 tgcgctggcc cttgcctggg cggaaggtga agaagtcctt gaagatgcgc ttgtgcacca
    44881 ccacgccgga caccagcgcc agcagcatgc aggcggtgat ccagccgacc agccagtagc
    44941 cggccatgcc gccgtgcagg gtgtaatgga aggacatgaa gtggcgcccg ccttcggttt
    45001 cccgaagacg aggtggtggt tgtggcattc cggtgccggc ctctacccag cgttcgtgcg
    45061 cggtgccgcc gtcatcctcc catgagagct gcagcggcca gccgtgctgg gcaggccaac
    45121 ggatctgcca tgcccgggca tcggcggcgt ttgcagccaa ccactgctgc gctcgcgctg
    45181 cctgcgcacc tgcatccatt tcctgcgggg aggccggcac cgggccggcc tccatccatc
    45241 gcgtgatcgg ctcgcggaac acgctgagcg tgccggtgag gaagatcgcg cacaacagcc
    45301 agccgcaggt gaggccgcac caggtgtgca gccacgacat gctctgccgg aagcccgcct
    45361 tcatgccatc cccgtggcgg gcatgccctc gtcccgccgg ttgcggagga tcacagcgcg
    45421 ccgcgcagcg tcagcatcac gttgcggggt tcgccaaaga agttgccgcg gcggatctgg
    45481 ctgatcatcg cgtaatagcg cgtgtcgaac aggttggcca cgttgacgcc cacgctccag
    45541 cgcggattga tccggtagcc ggcacgcagg tcccacaccg cgcgtcccgc cgcacccatg
    45601 cgccagtccg ggtcgtcgta ggccggatag gaatagctgc tctgtgcaga gacgccaccg
    45661 cccacggaga acgcattcca ccggccgggc agctggtagg acgttgacag gcgcagcaga
    45721 tggcgcggcg tttcggcgct gatggtggcg ccttcatcgt cgcggctggt gacgtgggta
    45781 tagcccgcca tcatctgcca gccgggcgcc agttcgccgc tggcttcgag ttcaaagccc
    45841 ttgctgcgca gctttccacc attgcggtag caatcggacg aggccagcga gccggggcaa
    45901 ctgcccgggt ctgacgcgtc caccacggcg ttgccggtct tgcggatgga aaacaccgca
    45961 gcggagacgt tcaggcgccc atcgttcagt tcgcccttca cgcccagctc gtagttggcg
    46021 ccgatggcgg gatcgagcac cgcaccggat gatgtgacgt aggagctctg cggctggaag
    46081 gtatcggcgt agctggcgta gaccgaccac tgcgggccca ggtcgtagac gaggccggcg
    46141 tacggggtga attcgtgctt ctgttcgtag tcgcggctct tggcgccggt gaagccatcg
    46201 ttggactggt acttcaccca gctcagccgg ccacccagcg tgaggtgcag cggttctgcc
    46261 agctgcaggc gcaggttgct gtacaggccg ctttgttgcg cacgcgcgtt ttccgaccag
    46321 tcccacgcgg gttgcagtgg ctgtgcgatg gcgctgtggt ccggcgcgta gacatcgatc
    46381 ggcacgtcga tggccaggtc cgccgagctc tggcgggtac gctggcgcga ccacatcgcc
    46441 cccagcagca gctggtgggt gcggccgaag gcgtcgaaac tgccggtggt gtgcaggtcg
    46501 atgccatcgc tgcgcacgcg cgatcggttg aagtagatgt catagaagcg cgagccgatg
    46561 ccggtggccc ggtccacccc gcccaccgga accgcaacgc gctggtccag gtccgattcg
    46621 gtgcggttca ccgacaggcg cgccttccag cgctcgttga agcggtgctc cgcttcggcg
    46681 aaggcttcgt caacggagcc ttcctggcgg ttccagtcct ggatgagcga ggtggaacgc
    46741 ttgatgtcca gcgccccgcc atcggtatag cgcggcaggc cgaacagcca gtagccgtcg
    46801 gtgtcactgg cctgatgacg caggccgaag gtgagcgtgg tgtcctggcc caggtcggca
    46861 tcgatcacgc cgtaggccac cggcgtcttc gatgaggtgc cgcgctggaa gtagtggcgg
    46921 tcctggtagg cggcgacgag tcggccgcgc acgctgccgg cggcattgag cgggccgcca
    46981 ccgtcgacct cgaggcgata gttgtcccac gagcccagcg tggccgccag atcgagatgg
    47041 gcctggtcgc gcgggcgctt gcgcaccatg ttgatcgctc cgctggggtc ggccgcgccg
    47101 agcatcatgc cgccggcacc gcgcagcact tcaacccgct ccagcacggc ggtgtcgatc
    47161 ggcagccagc ccaccggggc atagacaatg ccggccacgc catcgaccag atagttgctg
    47221 tcgtccacgg tgaagctgcg gatcgagaac ttgtggttgc cgaagttgcg cgcggtcttg
    47281 gtcacgcccg tggtctgcgc cagtgcctcg tccaacgtgg tgaggttgcg gtcgtccagc
    47341 tgctggcggg tgatcacgct gaccgattgc ggggtctggc ggatgctctg ccccagcttg
    47401 cccaggctca gctcacgtgc cgtgtaggag ccctcgcctg gggcattggc ggtcacgttc
    47461 accgtctgca gggtggtctg ggcatccttg ctgcgcgcag gtgatgctgc gtcctgcgcc
    47521 agcgtgaaca cgccggggcg ggtggcgttg acacgtaccc cgctgccctc cagcaggcgc
    47581 gccagtgctt cctgcggcgt gtagctgcct gtcacggccg gcgcgcgacg gccggccacc
    47641 gccgattcac tgaacaacac ctgctgccgc gactgttcgg agaagcggcg cagtgctgcg
    47701 tccagcggtt gggccggaat attgaaaggc atgcgcgacg ccggctgcgc ctgtgcgatg
    47761 gccggcgcgg ccagtgcgct ggaaatgcac acggccagca gcggcagccg cgtggcctgt
    47821 accccggtag agaacgcgcg ggcgacaagt gcgcgcttga tcttcatgta ccccattacc
    47881 gctccatcat gcttggccac cactggcctc actggggtaa acggaaaaca gcgatggggt
    47941 gggaacccgt gctggaacaa tttcttcctg cggcgtcagc gcgtgacagg ccgctcgtcg
    48001 atgcgatagc cgccctgcgc cgtgcgggtg acccgtacag gcaacagatc cggcagcgcc
    48061 tccacgaagc tggccggggc gtcggtggcg gcgtagccgg aaaccggcag gaatttcagc
    48121 cccggctggc ccagcgtgac cgggtggccc agatactgcg cgacttcctg tgccacttcg
    48181 tccagcgggg tgcgccggaa caccaggcgc ccgttgcgcc aaccgccgat gctgtctgca
    48241 ctggcagaga tgggacgata cgtggctgtg gcagtggtaa cggccaggcc ctgttcggcg
    48301 tacaggctga ccggcgcggt gccttcggtg cggtccggct gtacccgcac gtgcccatgc
    48361 agcaccttga ccagcacttc gcccggcccg ttacgcacgt tgaaggcggt gccgaccacg
    48421 gtcacccggc tgcgctgggc atcgacggtg aagggccgct cggccgccgg ggcgacctcg
    48481 aagaacgcct cgccctggct gagcactact tcgcggcgag agcgatagaa atgcacggcc
    48541 agcgtgctgc gcgcgttgag cgaaatccgt gagccgtcgg gcagttgcag atcacggatc
    48601 tcgccagcgc cggtgctcac gtcctgtacg tagctgggcg cggtgtacca cccgtagccg
    48661 acccaaccca gggccaggag cgccaccgcc gcagcggtcg ccacccgagg aaggcgtcgc
    48721 gaccgcgcgc gacgcgtcat gccgtccggt cgcagggcgg caggtgccgc tggcgcacgc
    48781 gcggcctgag tgtccgaagc caatgcgggg cgcggcagct ggccgaggtc gtgccaggtc
    48841 tgggccacgt cggtgaacgc ctgttggtgc gcttcgcttt cggcgagcca gtgctgcagg
    48901 gccgcctcgt cctccgggcg ccagtccaca tcctgccgtc gcagcagcca cgtggacgcc
    48961 gcctcgtgca gggcaaacgg gtcagaacct gcggcagaag ggatatcggt catcggcagg
    49021 gaagatcggc gtcaatggca ggcgccaacc cctcgcctgc ctcgctggac cgatgcagtt
    49081 cctgcatctg ttccagcgac gcatagcgta cccgcacttg gcagtaagca accgcgcgcg
    49141 acaggtgctt gaccaccatg cgccgggaga tctgcatgcg ggcggccacc tcttcctggg
    49201 tcaggccatc gaagcggcag agcacgaatg cttcgcgttg gcgctcgggc agttcggcca
    49261 tcgcgtctgc caggcgttgc aggcgctggc gctgtgcggt gagctgcaac gggcactgtg
    49321 attcatcgct ggccatggga tggccggcat cctccgcatc tgccagaggc acggtctgca
    49381 cgtggcggcc tgcgctgcgc tcgcggtatt catcggccac ggtgttcatt accgtccggc
    49441 gaaggtaggc gccctgctgg tcgctggacg ccagcgaagg atttgccgca atccatttga
    49501 ctgcaccgtc gtgcagggcg tcctcagcgt ctccgcctct gacacgcgca aggccgcgga
    49561 ggatgggcgc ccgccaacgg gcataggctt tggaaagcag gctcccgccc gtggatgagc
    49621 cgctctcggc caggccggcc tctgctgatg cgctgtggtt cgcggccccg cccgtgcccc
    49681 ggcctagcgc ggacacggcg tcctcaggac agatgcctgc ggtctgcaca ggtagggcgg
    49741 gacgttcact tggatagccg gcggatgggc cgcactaggc gacagacggg tggagacctg
    49801 caagtgtagt gagagtcatt tgcaattgga actcccccgc cctgcccgtc cccccctcgc
    49861 gaaaggcgcg ccggtgctac gtcactcgcg cgacgggcca gcaccttcgg caaccctgac
    49921 gaagacgggg ttggaataga accacagatc cgcccacgga tcctcgccgg gcgcgtccgc
    49981 cagtgcatcc accgcaccgg tgctgttgcc ccgcacccgc acgaagccac cgcgcggcgg
    50041 caccggcact gaccagcgcg ccacgatcca gtcgccgtca cgctgccagg ttgccgcgtc
    50101 gaatccgcgc cgctgcatct gcagcgcacc gccctcatcc ctcccgccca cgatcaactc
    50161 gatgcgctcc agcgccgggt gctgtccgct cgcgttggcg cgcgccggct gccgtgcccg
    50221 cacctccagc tgcatcgtct gcactgccgg cagcaccagc gtgccgccca tcccggcgct
    50281 ggagtcgcct gcggctaccc gcagctgcaa ggcgtcgatc aggtcgccgg tgacggtgaa
    50341 catgcggccg ttgcgcaggg catccaggat gtcttcggcc tccggccgcg cccatgcgta
    50401 cgtcttgctg tattcgcccg ggtcgtaatc gcgcccgcca tcgcgcaggt tcacatgcga
    50461 gtcggagttg gcggtgatcc agaagcggat gccatcggcc agcatctggt cccagattcc
    50521 gccgacctgc gcggtcatct ggtcgtagcc gcccagtgtc ggcgcggccg cgttacggta
    50581 cagcccgcgt tcgctgcgga tggcctggtg cccgggagcg ccctccatgc ccaccagtac
    50641 ctggggtgcg gctgcatgcc agccgcgcag ttcgtcgggg gtcacctcgc cccactcgcc
    50701 gatgccggtc gcggtgcgcg aaggatggtt gatgaacatc agtggcgcag gggccaggcc
    50761 gcgcaggtag gccagcgccg cctgcatctg ctgttcgcta tcgcggctgc cgtgcagtgg
    50821 ctcgctgcgg ctgaagtccc gctcggcgac gaccagctgc tcccgctcct gcgggccggg
    50881 cgcgatgatc agcgaggcgt gctcacccgc gggcacatcg aattccatgc cgttgaactg
    50941 gatcacttcg ggcacatcgg tgcgcgcctg cagcagcgcg ggataggcat ggtcgcgggt
    51001 gaccgcggag tggccggggc caccgtggtc ggtgtggacc atccagcgca ggccgaaggc
    51061 cctggcctgc gccgcgttgt ggctgcggct gtacggcgag tcgccaccac gcacgggcgt
    51121 gggcggcgtg gtgcggcggt cccagtccac gctccattcg ctgtgcacgt ggtggtcacc
    51181 ggccagccat tggcggccag cgtcgtctgc cggccttgcc gccgccgggg cggagaatgc
    51241 cggggccgcc gctgcgaaca gcgccagcat tacaaggttc ttcatgggtt cacctctgaa
    51301 aagcgcgcgg acgacgcacg gacccttgcg ggtccgcacg ctgccggtgc gtggatgcct
    51361 gcttagaagt ccgcgcgcag gcccaggctg atgcgacggc ccgaggtctc atccatggtc
    51421 gggaaggacg ggtccatggt gtaaccgctg gtccgctcgt tggtgaggtt gatgcccttc
    51481 aggctgatct tgatgttgtc ggtgatgcgg taaccgatcg acacatccat ctggccgtag
    51541 gcatcgcgcc agatcgggta caggttgtag ccgatcgatt cgacgtaggc gcccttgtgg
    51601 ttgtaggaca cgcgcgcgtc gaaacgcgaa ttctcgtagt aggcggtgag gttccaggtc
    51661 ttctccgaca gccccggcat cggggtgcgg atgcccaggc tggattcgcc ggccagcgag
    51721 ctgtccagca tggtgtagtt ggcattgatg ccaaacccgt ccagccacgg cgtgaacatg
    51781 ttcagcggca gctgtgccac cagttcaacg ccatcgacct ggtaggaacc cttggcattc
    51841 acaggctggt agacgtcgaa atcgtagatg ccattgaggc tgccgttggc gttgtatacc
    51901 gccacattct gaaccacgcc ggtcagcgag ttgatcacca cgccatcgat gttcttgcgg
    51961 aagtagctgg cggcgaacag cgcgccgttg tccaggtact tctccaggcc gatctcccac
    52021 tgcttggcat aggtgggctt cagctcagga ttgccatcgg tgaaacggta ggagccccag
    52081 ctggcggtgc gcttgtaggc gatgtcggcc agcgccgggc gcatcatcac cttggacgcc
    52141 gccgcgcgca gcagcaggcc gtgcgacagc tcggcggtca tgttgaagct gggcagcagg
    52201 tcgtcatagc tgccgtcctt cgacaccggg gtgtcggtgt agccggtgct gccgttgggc
    52261 agctggatcg ggtgatagcc gaacgaatcg accttggtat ccacgtagcg cgcacccgca
    52321 ttgacggtga acggcacgct gccgatatcg aaggcgaagt cggccatcgc gtagaagctc
    52381 atcaccttct cgtccacctg gtagaactgg ccaggatcga acggggtctg gaagcccgcg
    52441 tagcggaacg cgctgcgtgc gtagtcgttg gagatctgct gccaggccag ccccttgttg
    52501 gaatagctgc caccgggaac gatgtcgtcg atgtactgca gcgggctgtc ggccatcgtg
    52561 cgggtgttga cccaggcgct gctgcccgcg ctcggcccgg tgatcttcag ctcgccgtac
    52621 tggcgttcct tggaacggtc ggtgtagcgc gcaccgaacc ggaccgtgtg cagcgcgggc
    52681 aggaaggcca tgtccagcag gcgggtgaca ttgacctggg cggcgtactt gtcgtccttc
    52741 actttctcca gcgtggtctc gtaggcctcg aacaggtacc ggctcgggtc gttgtacatg
    52801 tcgaagctgc cggcggcggc ggtcgggatg gtctcaccgc tgctgccggt ccagcgggtg
    52861 cgcgacggcg cataggccac gtgcttgagg ttggagaaat ccgaggtctt ctccgcgccg
    52921 gagtagccca ccagcgcatc cacgtaccag cggtcgccct tccagtccat cgccatgctg
    52981 tactggctgt agtcggtctt gttgatccgc tccttgctca gcatctcgtg ctgggtggcg
    53041 gtgtaggaca catcacgcag caccaccatg ccgtactcgg acagcgtagt ggcatcgtag
    53101 gcatggatgg tgtcgaacgt actgcggctg gacgccgaat aggcggcagc gtcgtactca
    53161 tcttcggtgc tgtcatagcc gccgaccatc gcgtcgaagg tcaggctgaa gttgttgctg
    53221 ggcttgtact gcagcgaccc tgtggcgccc cacttgtcct gttcgttgag gtagacgcga
    53281 tcacccacct tgtcctggaa cacgacccgg ttggtctgct cggcatcatt gcgattggtg
    53341 atgttgacgc ccgcatcgcg cagcagcacg gcctgcgcct gggtaccgcg ggtgcccgag
    53401 gcggtgagga agcgcgagga cggccggaag ttgatgcccg aggtggagtc ggtgcggttg
    53461 gtgcgcttgg actgcgagta cgagaccagc gcgccccagt caccccaggt atcggcggca
    53521 aggaaggcaa aacgcgggtc cacctcctcc gagatgctgt tgtgcgcgcc ttcggcggag
    53581 aacaccagct tgcgttcgtt gtagtcgaac gggcgagccg tggaaatctt caccgagccg
    53641 gcaatgccgc cctcttcgtc ggcggcggtg ggcgacttct gcacggtcac ctgctggatg
    53701 atctccgagg cgaacatgtc gaactctaca tcgcgaccgc cactgcccga ggcggtcgcc
    53761 agatcgttga tcgaaacgtg ggtgtactcc gaaggcaggc cgcgcacatt gaccttggtg
    53821 cccaggccct tgttgcgctc gatggtcacg cccggcatgc gctgcagggc ttcggcgaga
    53881 ttctgttcgg gaaaatcggc cacgtcggtc gcgacgatcg aatctgaaaa gcccaccgtg
    53941 gcgcgcttga tatccacggc cttctccagg ctgcggctgt agctgccggt gacctggatg
    54001 gtttccaggt tggcggcctg cgcaccggaa ctcgcagcgc cggccggtgc cgatgccgca
    54061 actgcgccca ctgccgcctc gggtgctgcc agcgcggagg tggctgccgg cgcgctggcg
    54121 tcctgtgctt cgatggtgac cgtggtggcg ttgagatagc ggtagcgcag gccggtgccg
    54181 gccagcagcc gggtcagcgc tgcgtccgcg ctcaggccgg ccggtacgcc cggcgtgcgc
    54241 ggattgcccg cattctgcgc gttgtagacg aactgcaggc cagtctggcg cgacagcgcg
    54301 ttgagcgccc catccagcgg ctgcgaggcg atcgcttcgc tggcgacgcg tgccggttct
    54361 gcggcgttgg cgccggctgt ggcggtgatc tgcagtgcaa gggcaatgga aaggaacagg
    54421 gtgcggcgca tcgtagggtc cagtagggaa tggcggtggt cgcggaacag gtgtgttcct
    54481 gcattcccca tctacgaggg cgcagcgcgc cgatcgggca ccacttgttc gatgaatttt
    54541 ttcttacagc gcctgcggcg ctccagcgcg caaccgcaca tggattccgt ccggcgccac
    54601 ctgcgtaacc agtgttggtt gctggtcgag gaacgcgcgc agcgacgcca cgtcatccgc
    54661 gcgcaggttg ccggtcaggc gcagcgcacc agcgtcatca ctcacgtgca ggcgcagcgc
    54721 gttgcgccgg ttgaagcggt cggccacgtc gcgcagcgcc tcgtcgcgga acagcacccg
    54781 ccccgtccac catgccgtca tgctggcggc atcctcctcg cggatgcgca cgcgctggtc
    54841 acggtagtcg acctgcgcgg cctgcccggc gcccaggtcg gccagcatgc gtccgcggcc
    54901 accatcgccg cgcacgtgca cgcgcccttc gctgaccccg atgcgggcct gctcgcgcag
    54961 cagggaaaca tcgaacgtgg tgccgatgtc cgtcacctgc aggccagcag catgtactgc
    55021 gaacgggcgc cggtccttgg ccacgacgaa gctggcttgg ccacgttcaa gctcgacgcg
    55081 ccgccccagc agggtcatgc gcaccgaaat ttcgctttca gcgtccaggc gcacgacggt
    55141 gctgtctggc agcgttacct gccgcggcat gccatgtgcg gccacatagt gcccggtgcg
    55201 cggcaaggcg atggtggcgc ctacgcctac agcgagcatc agcgccgctg cggccgcgat
    55261 gcgcggcaag ccgggtgcgg gccgtgccgg gcgctggctt ggtgcggcgg acgggcgtgg
    55321 cgacaaccgc acgacgttgt gatcattgcg cgtcggcgcg ggagccttca acagtgcatc
    55381 gacgtcatcc ggcatgtcgc gcagcgcatc ggccagtgca ccggccacct cgctgatggc
    55441 catgtactcg cgcaggtgtt cgggggaaac cagcagccac tgcatgaagg cgtgctgctg
    55501 cgaagggctg aggtcgcctt cgcgctgcag cgcgtgccac tgcgcggcgg ccagggtcag
    55561 cgccgatgga tgttcagtgg ccacgctcac gacctccctg ccggttcggc cagcgcccgg
    55621 cggcacaccg aaagcccgcg caccacatgc ttcttcacca tatgcgctga cacgcccatg
    55681 cgttcggcga tctgcttgta gctcagacca tcgcggtact gcatgaccag caccgcccgg
    55741 gtgtgttcgg gcagggtctc cagcagcgtc tgcagccgtt ggcggcgctg ctcccgttcg
    55801 gcggcgtctt ccacgcattc cccgctggcc aggctttggc ccgggccttc gatctcttcg
    55861 atggacaggg tcgaccagcg ccggcgcgcg gcctgctcgc gtgccagatt ctgcgcgacg
    55921 gtgaacaggt acgcttccgg gttggcgatc ggctcgccct tgccttcatg cgcacgcagc
    55981 aggcgcagat aggtttcctg caccaggtct tcggcgtcct gccgcgcacc acgtcgcacg
    56041 aagaagccac gcaagagtgg cgcgtgctct tcgaacatgc gcgccaggcg ccgtcttgcc
    56101 tgttcggcca cctgcgtcgc ccctgccccc tgaagtgcgc cgcaaggtac gggcgcggtg
    56161 tgacgccttc atgacggctg cacattggcc gtggcggtgc tccttctcca acccggctat
    56221 gtatcggtgt gatccccgct ggcctgtcga cgccgcaact gggctgctac ggccctgtga
    56281 ccacttcgaa accggccgct ttccattcgg gaaagccatc ctccaggcgc cgcacagtga
    56341 agcccagtgc cctcagtttt tccacgacct cgaaggacat cacgcaatac gggcctcggc
    56401 agtaggccac gatctccctg tccctgggca ggttgatcaa tgccgcttcc agttccgagg
    56461 cgggaacgtt caaggcaccg ggaagatggc ccagggcgta ttccgacgaa ggccgaacat
    56521 ccagaagggt tactccatcc gtctccaggc gctccagcag cgcttcgcgc gatacgggtt
    56581 caagggcatc gcgctgttcg aagaaatccc gcatgacacc ctgcacttcg gcaacattgc
    56641 gctcgccgaa gcagcccagc gcccgcagca gcgcaacgac ctcggcctcg ccggaaaggc
    56701 tgtaatagat acgcttgcct tggcgatcgg gctccaccag ccgggcccgc cgcagcaact
    56761 gaaggtgtcg cgaggtattg gccacgctca acccggtcgc ctccgccagc gcctcgacgc
    56821 tgcgcggccc ctgcgaaatc gcctccagca gctccagccg gtggacatgc ccgatcgcct
    56881 gggcgacgtc agccagggcg tgatagatcg cctgcctggg ctgggggatt gactttgcct
    56941 tatccatact caaacattct gcatattgat tgaatgttag tccagtcact ggctgaaccc
    57001 gcgtcacggc acccatccta tccaagaagc gtccccatgc ccggcaaccc catgcatcgg
    57061 caggtgttcc tgctggccag cgcccaggcg ctgttccaga ttgtctcggt gatcgtcatg
    57121 accgtcggcg ggctggcggg tgctcacctc gcccctgccc cgcagtgggc caccctcccc
    57181 atcgcgacca tgtttctggg aacggcattg accaccttcc ccgccgccat gtggatggcc
    57241 agggccgggc gccagcgagg tggcagacga agcgttccgc ccccggggcg atctcgctgg
    57301 tgatggccgg cggcatcatt gcggcgctgg tcgggccatc gctggcccgc ctgggagggc
    57361 cgctgctgca ggcggagtat caaggctcct tcctcatcct cgccgtggtc tcgctggtgg
    57421 cgaccggagt gctggccgga ttgagaatgc cggcgacccc agaaaccgag ccgggggagc
    57481 ccgctgggcg cccatggcag cagatcgtgt tccagcccgc gtacctggtg gcactgttcg
    57541 gcgctgcgac cggctatgga atcatgatcc tggcgatgac ggcgacgtcc attgccatgg
    57601 ttcaccatca tcacgccctt ggcagtgccg caacggtgat ccagctccat gtgctgggca
    57661 tgttcctgcc ctcgttcctt accggatcgc tgatcgctcg ttttggcgct gtccgcatca
    57721 tgctggccgg tgcggtgatc ttcgtcgggc atgtactgat gacgaccacc ggcactggat
    57781 tcggctcctt tgcgacggca ctggtcatgc tcggcgtggg ctggaacttc atgtacgtgg
    57841 gaggcacggc actgctcacc acgacctaca cgcaggccga gcgcgcccgg gcacaggcga
    57901 tcaacgacat gaccatcttc gttgtcggtc tgggctgttc gtttggtgca ggaggcctgt
    57961 tggatgcgct tggctggcag cgcatgaacc tgatgctgat tccgtggctg ctggccgcgg
    58021 cggcggcact ggcctggctt gggcgcaaag ggcggcgcgc cgccctggca tcgggtgtgt
    58081 agatgcggcg ttgcgtcggc agagggctat tactgtgacg cgtcacgctc gagcggaact
    58141 cagcccgcga tccccagccc cttgcccgcc gcgtccagcc gcaacgaagc caggtagcgg
    58201 cagtacttgc caatgaacag gccggtgaat ccacccgaca gcagcaggta cgccgcgctg
    58261 gcgccggcat ggttggtcaa tgcgggcgag atcgcaaagg cgacttcgaa gccgtacttc
    58321 accaggaacg tgaccagcag cagcggcaac acgctgtagt ccgcattgcg ccagagcttc
    58381 ccggtggcgc tgtcgaacgt cagcttcagg tggcccagca gcagccaccc cagcgccgcg
    58441 cccgagccga tgccggccag ccactcagcc caggtactca gggacatccc gtagcggtgg
    58501 ctgatcgacc aggcacccca tacggtgaac agcacaggca ccacggccag cttctgcagg
    58561 gacgtttcgc ccggcttcat ggcggcaata ccgcgcgtga ccaggaaggc cagaagcagc
    58621 cagacccagg taggcgtctg cgacacaagg tgctggagca tgttcatggg tcgtccctcg
    58681 gctgaatggt ggcggagcgt ctccgccttg gtgctcacta ttcgcttcca gcccagttgc
    58741 ggccagtgac agctgtcagc catcgagggt tacttggggg aacgaaatga gacgaggacg
    58801 ctctcgatcc aatccacata ccgcgacacc cgaacgttgt gcaccacctg gccgtaaaag
    58861 cccgcctcga gggcatgctc gggaacggcg ctgatccagg agcccaagcc gaccaactgc
    58921 caggttccat gatcctcgac cagcaacggt ccaccgctgt cgccgttgcc gagcaccccc
    58981 tcgagcggca ggccctgcgg cggcgcatcg aaccgatacc agagatagcg atcgttgccg
    59041 ccggtaatgg cgttgcatgc gcgccgcaag gcggttcgat gcgatcctcc cggcaccagc
    59101 ccaaccgcac cattgcctgt ggcgcccttg cctatcaggg tggcggcctg cgtgacctcg
    59161 gcattgccgc gatagagcgc cacgggtggc acatcgttca ccggcgctgc gagccggatc
    59221 aacgcaatgt catccgattc ggccaggaac gcgtggatct tcgcggggct gcccgtcgcc
    59281 agcgcctcct tgcccagcgc atcgggcatc ttcctgtagc cggggtgcag tatcacccgc
    59341 tccacgccgt agtcggttcc attgatggcg atcgcctgcc ccattccttc catcggtgcg
    59401 gcatgcgctg cagtcagcac ccatcgcggc gcgatcagaa cgccctgccc ctcgcccggc
    59461 atgtcggcca gggctggaaa ttcggatcca tcgatccggt atcgggcatc gtccacatcg
    59521 tgccggatca cgacggcccc ggcaacggat ggcagggcgg cgaacgcgag gagcagccag
    59581 cgaatcatgt ggacctttgt cgttgcgttc agtcgcagca gcctagccga acacttcccg
    59641 caaagtcagt gcctgcgacc ggacctccac gttcaacgac gaacgcagtg aaaaccgcct
    59701 tcgaggaggc tccggccaca tgccgttaac ggcccggccc tatgctggag cttcatgcaa
    59761 acccacgagg cacgacccat gaccaagctg cacaccctgc tgctgaccgg cggcttgctc
    59821 gccctgagcc cgctggcctc ggccgagacc gtgaacctga ccaacagcgc cgacggcgcc
    59881 aaccgcgagg ccggcatcac ggcggtgaaa aagaagctgc aggatgcgtg taccgaccgc
    59941 aagggctcgc ccgatgccgc ctcgttcgaa gtggtgttcg agaagaccag cgagaacccc
    60001 aacgtaccca agccctacta tgtggacggc cggatgaagt gcgacctgcc gggctgaagc
    60061 gccccgctca ctcctgttcc agctccttca atacggcgcg caggcgcgcg tcgccgggcg
    60121 ccagcgccgc cgccgtccga tagctgttga tcgcctgctt gcgctggcca ttggcccggt
    60181 aggcttcgcc caggctgtca tgcacattcg ccgattgcgg gtgcgcgcgg gcattccact
    60241 ggaacacggc cactgattcc ggcacgcgct tcatcctcaa cagacgatag cccagcgagt
    60301 tcagcgcctg ctcggaggtg tcgtactggc tggccgcagg ccccagtgcc tcataggcgc
    60361 gggtcatgcc ctgcaccccc gatgaaagtg cggccggcac cagcagggtg cccagattct
    60421 tccgggccag ggtaaccggc atgccgtgca gcacgcccat cagttccttg cccaggctcg
    60481 ctgcggtctc gccctgccag tagttgtcca gcacgatcac caccgagtga tcctgcccgg
    60541 cgcggagcca gtaggtctgg tagcccggaa cgctgcccgt atgcgattcc accgggtagg
    60601 tgccaccggc aggcaagggc cagttctcca cttcccaacc gtagccatag cccgagcgat
    60661 ggttggtcca catggcccgc cgcgaaggcg cgctcagcag tgaatcatcc tgcagggcct
    60721 ggtccagccg cagcagatcg tcaacggtgg agtacaggcc ggcggccgag aacgagacgc
    60781 tcggatcgat gggcatcggg cgcgccaggc tgaagtccgg ccgggtctgg tagccggtcg
    60841 ccaggcgcgg aatgagtgcg ctggcgtggt acagcccgct gttggtcatg ccggccttgt
    60901 ccaggatccg gcgctgcagg ttggcctcgt agctggcgcc cgttgccttc tcgatgatca
    60961 ggccgagcag gaagtagcca ttgttgttgt agcgccactc ggcccccggc gcgctctgca
    61021 gcgtgccggg aatccacgct ttggcgaagt catcgggcgc cagcgagagc cgggcctgcg
    61081 tctgccacca cgggtcttca taactgcgcg gcaggtcggc aatgccggac gtgtgattca
    61141 acagctgcgc caccgtgacc gcagccgcag gcgtgccggc atagagcgcg ggcaggtact
    61201 cgcccagcgt gccgtccagc cgcaatgtgt tttcctgcac cagctgcatc accaggatgg
    61261 cggtgatcgg cttgctcagc gagccgatgc ggaaaacacc atcctcgacg ttcggcacct
    61321 gccattcgcg gttggccagt ccatgggcgc cccgatacag gatgcgcccg tgctgggcga
    61381 caagcacgac gccgttgaaa tcacgattcg ctgcataact gtccaccagc tgcgcgatct
    61441 cggccgggcc agcggccgcc ctcgcctgcc cggcgacgcc ggccagcaac accagcgaac
    61501 ccgccgctgc ggaaaccatc ctcagcactg accgcttcca ctccatggag aactgcagga
    61561 tggcgctggg catctaccta cctcacgagt cgatgccgca gtgtagcggt gccgggctgc
    61621 cgcgaacgcg tcccggccgc catgactgat ggcctatgag gggctggacg ccagtgcgcg
    61681 ctgccgatag cgctcgatcc acgccagcga cggtgcgatg ccgccaaacg gaaagaagtg
    61741 cggactgacc gcgccatggg cgtcggtcag cccccgcacg aggtggtcga caaacacctc
    61801 cggcccggcc gttcccagca accggccgat cgagatgccg taccgcgcca gcatcgaggc
    61861 actggctccc acgccacaca tcgcggcgta gcgcgccagc cgcgtgatgc tggccggccc
    61921 aggcacgccg accagcaccg gaacgcggat gtcgcgggag cgcaggtcat ccagccaggc
    61981 cagaacgatg tcggcatcaa aggcgaactg ggtgatgatc agcggcgcca tgcgccgtgc
    62041 ctcgatggcc tggcacttgc gttcaagcac ctgccagcgc tcgccactgc ccatcaccgg
    62101 atggccttcc gggtgcccgc cgatggcgac caccttgatg ccggagcctt cgagaatgcc
    62161 ggtgtcgatg atcgcggcac tgtcggcgaa cggcccggca ggcgctgcca gatcgccggc
    62221 gatcaacagg catcgctcca ccccggcctc actggcggca cgctgcatga aacgctcaag
    62281 cgcagcccgc gactcgatgc ggcgcgccga cagatgtggc atcggctcga aacccagctg
    62341 gcgcacgatg cgtgccgctg ccagccgcgc gttgtcgtct tcgcttgcca ggtacggaat
    62401 ggaaatggtc gtgcccggcg ggatgcgatc tgcttcggcg cgcaacgcag gcagggcctt
    62461 cgcgccgacc tccagcgaat acctgttgat gaaagccgct gcctgggcag gcgcacgtgc
    62521 ggacatcacc cgcccccgcg cacgttgctg gcgatgggcg tgctgttgcg ggccagttcg
    62581 acgaaggcct gcaggtagtc gatggtggtg tccgcctcgc gtgcccccag gtagatctgc
    62641 ttgggtatgc ccttcgcacc caggcgcacc ggcaccacgt ccatgcgcgc ggcgtactct
    62701 tccaccagcc agcgcggcat ggcggcgacc ccgcgcccgc tggccaccat ctgcatcatg
    62761 atgtcggtgg tttcaatggt cttgtggcgg cgcggcgtga tgccggccgg cagcaggaac
    62821 tggttgtaga tgtccagccg ctcgaacggc accgggtagc tgatcagcac ctcctggccg
    62881 agctggcgcg gctttacgtg gtcgaccctg gccagggcat ggctgctggc caccaccagc
    62941 acctgctcgt agtcgaacac gggcacgaac ttcaggccgg gcttgagcag cggatcgggc
    63001 gtgaccagca ggtcgatctc gtagccgaac agcgcgccga tgccgccgaa ctggaacttc
    63061 tgcttgacgt ccacgtccac gtccggccac gcggccaggt agggcgagac gatcttcagc
    63121 agccactggt agcaggggtg gcattccatg ccgatgcgca gcgcgccgcg ctcgccctgc
    63181 gcgaactggc ccaatcgctc ctcggccagg tccagctgcg gcagcacgcg attggccacc
    63241 gccagcaggt actgcccggc ctgggtcagg cgcaggctgc ggccttcgcg caaccagaca
    63301 tcggtgccga gctgctgctc cagcttcttc atgctgtggc tgagcgccga ctgggtcagg
    63361 ttgaggacgc cggcagcggc ggtcaacgag ccctgctgct cgacctgctg cacgatgctg
    63421 aggtggatac gctccagcat gatgatgaat cccgctcatg gattggtgaa gtaataccat
    63481 tttacgtcat ggaagggcat ggctagcatc ggctcatgcc ttcggttgcc tgtacgcccg
    63541 gtcaccccgc cggcccgcag gactgcgtcc gcgcagaccg cccgaagcag cccctcccca
    63601 gctgaaagca aaccgatgac ccgccccctc cgtatcgtcg ccgtctccgg cggactgcag
    63661 cgcccctcgc gggctgcaac cctggccgag cacctgctgg acctgatcgg cgaagacgtt
    63721 gcctgcgaac cgcacctgat cgagctgggc gagctggcgc cgcagctggc tggcgcgctg
    63781 tggcgatcgc agctgcccga ggcggtggag cggcagctgg ccgcggtcga gcaggccgac
    63841 gtgctggtgg tggccacgcc ggtctaccgc ggctcctaca cggggctgtt caagcacttt
    63901 ttcgacttca tccaccagga cgcgctggtc gataccccca tcctgctggc cgccactggc
    63961 ggcagcgaac gccacgcgct ggtgatcgac caccagctgc ggccgctctt cagcttcttc
    64021 caggcccgca cgctgccact gggtgtctat gccaccgacc gcgatttcgc cgatggccgc
    64081 gtgcacaacg atgcgctgat gcagcgggcg cggctggcgg tgcagcgggc gatgcccctg
    64141 cttgccctgt cccaccgcgc cgcaccggcc accgccgaga tcgcagcagc cctttgaatg
    64201 ccgaatgccg caatcctgca ttcggatgtg accccgcaac ccggaacgcc acccatgacg
    64261 accgacagct ttaccttcag catcacgcgc atccccttca acgaagacta ccagcccgct
    64321 gacggcacgc gcatcaccac caatttcgcc aacctggccc gtggcgcgtc gcggcaggag
    64381 aaccttcgca acacgatcag catgatcaac aaccgcttca acgacctggc ccactgggac
    64441 aaccccaatg ccgaccgtta cgcggtcgaa ttggacatca tctcggtgga gatgcacatc
    64501 gacggcggcg atggcagtga tccgttcccg ctgatcgaag tgctgcggcc aaccatcgtt
    64561 gacgcgcaga ccggcacgcg catcgaaggc atcgtcggca acaacttctc gtcctacgtg
    64621 cgcgattacg acttcagcgt ggtgctgccg gccagcaacg agggcaaggc caccttcggc
    64681 attccggacg gcttcggcga cctgcacggc aagctgttca ggcacttcct ggcgtcggac
    64741 gcctaccgtg ccaacttcag caaggcgccg gtgatctgca tcagcgtgtc cagcagcaag
    64801 acctatcacc gcaccgagaa ccaccacccg atcctgggcg tggagtaccg gcagggcgag
    64861 ttctccccca ccgaccagta cttcgacaag atggggctgc aggtgcgcta cttcatgccg
    64921 ccgggcagcg tcgcgccgct ggcgttctac ttccgcggcg acctgctggg cgactactcg
    64981 aacctggagc tgatcggcac catcagcacc atggaagcgt tccagaagat ctaccgcccg
    65041 gagatctaca acgccaactc ggtggccggc aaggtctacc agcccagcct gaagcaccag
    65101 gactattcct ccacccgcat cgtctacgac cgcgaagagc gcagccagct ggcggtcaag
    65161 cagggccggt tcaccgaaga gcacttcatc aagccgtacc gcgccgtgct tgagcagtgg
    65221 gctgcccgct gatccatcga tttccactcg cccccaggaa acaacacgca atgtcgacga
    65281 agaaactgct ccccacctcc accgccggca gcctgcccaa gccctcctgg ctggcagagc
    65341 ccgagaagct ctggtcgccc tggaagctgc aggacgacgc cctgaccgaa ggcaagcagg
    65401 acgcgctgcg cctgtccctg caggaacagc agcatgccgg catcgatatc gtcagcgacg
    65461 gtgagcagac ccggcagcac ttcgtgacca cgttcatcga gcacctcagc ggcgtcgatt
    65521 tcgagaagcg cgagaccgtg cgcatccgca accgctacga tgccagcgtg cccaccgtgg
    65581 tcggcgcggt cagccgcccg aagccggtgt tcgtggagga tgcgaagttc ctgcggcggc
    65641 agacctcgca gccgatcaag tgggccctgc ccggcccgat gaccatgatc gacacgctgt
    65701 acgacgcgca ctacaagagc cgcgagaagc tggcgtggga gttcgcgaag ctcctcaatg
    65761 aggaagcgag ggagctggag gctgccggcg tggacatcat ccagttcgac gagccggcct
    65821 tcaatgtgtt cttcgacgaa gtgaacgact ggggcgtggc cgcgctggaa cgggcggttg
    65881 aaggactgaa gtgcgaaacc gccgtgcaca tctgctacgg ctacggcatc aaggccaaca
    65941 ccgactggaa gcagacgctg ggctcggagt ggcgccagta cgaggaatcg ttcccgaagc
    66001 tgcagacgtc cagcctggac atcatctcgc tggaatgcca caactcgcac gtgccgatcg
    66061 acctgatcga actggtgcgc ggcaagaagg tgatggtcgg cgccatcgat gtggcctcca
    66121 gcacggtgga aaccgccgag gaagtggcca acaccctgcg cagggcactg cagttcgtcg
    66181 atgccgacaa gctgtacccg agcaccaact gtggcatggc accgctggcc cgtgatgtcg
    66241 cgcgaggcaa gctgcgcgcg ctcagcgaag gagcgaggat cgtgcgcgag gaactctcgg
    66301 cctgaccccg gcccgggcgt ggttgcccgc tgcaacaccg ttcgcagggt atgatgccgc
    66361 ctccctccga actgctgtgt gtgcagcggg cgtgctgctg ttggtagcgt gccggcgcag
    66421 ccgagatccc ccgcccgatg cccgcttcct actcaccttt gttgatctgg gcggctgtgg
    66481 ccgtggccac ggtcggcctg ctgttccgtc cgttccgcat tccggaatac gtgtgggcgc
    66541 tgggggctgc cgcattgctg ccgctgctgg gtgcggtatc gctggacatg acctggggtg
    66601 cggtggccga gggccgtgac gtctatctgt tcctggtcgg catgatggtg ctggccgagc
    66661 ttgcccgtcg cgaaggcctg ttcgactggc tggcgctgta tgcggtgcgg catgcgggcg
    66721 gctcggggcg acgcctgttc gacctggtgt tcctggtcgg cacgctggta accgtgtttc
    66781 tctccaacga tgccacggcc gtggtgctga cgcctgcggt gtacgccgcc tgcagggcgg
    66841 cgcgtgccaa cccgctgccc tacctgttcg tctgcgcgtt catcgccaat gcggccagct
    66901 tcgtgctgcc catttccaat ccggccaatc tggtggtgta cggccagcac atgccgccgc
    66961 tgctgcagtg gctggcgcag ttcgcactgc cttcgctggc tgcgatcggc gccacctacc
    67021 tggtgctgcg ctgggtccac cggcacgaga tcgcccaacc gctggtggcg gcaccagagc
    67081 atcggccgct gaccgacggc ggccggctca gcgcgctggg cgtcctgttc accggcagcg
    67141 cgctgctggt gacctcggcg ctcaacggcc cgctgggcct ggccacgttc tgtgccggcg
    67201 ggctcagcgt cgccgtggtg gcgatccggc agcgccgcag cccgctgccg atgctgcgcc
    67261 acgtgtcgtg gggcgtactg ccgctggtgg ctggcctgtt cgtgctggtg gaggctgtcg
    67321 cacagaccgg cgccatccag agcacggccc gcgcattgca ggctctggcg cagacgtcgc
    67381 ccgggcaggc cagctggctg gccgggggcg ccgccgcgct gctgagcaac gtggccaaca
    67441 atctgccggt ggggctggca gccgggtcgc tgggccagat ggccgatctg ccggcacaga
    67501 cccgggccgc gctgctggtg ggcgtggacc tgggccccaa cctgtcggtg accggctcgt
    67561 tggccacgat gctgtggctg gtagcgctgc gccgcgaagg cgagcatgtc agcgcactcg
    67621 acttcctgcg cgtcggcgcg ctggtgatgc caccggcact gatcggtgcc ctgctgctgc
    67681 tgtagccgtg cgctgcctca ccctgcccga ggcggtaacg cttcgcgtgc gaccactttt
    67741 ccgacaagcg tatcgatcgc cgcttccatg gcacgcgcgg tctggtcgcc gctctggttg
    67801 gtgatgacga agatacccag gtcatgcttc ggcatgatgt agatgtagca ctgcgatcgg
    67861 gggacgccgc catggtgggc gtagtagacg cccttctggc gatcgccagc gacgatgttc
    67921 cagaagtagc cgacgctgaa ctcatcgtcg aaccgggcca aagcgcgatg tgattccttt
    67981 accaccggcc cattggccag ctggaactga aggtacttca ccatctcggg gacagtagcc
    68041 ttcacaccgc ccgaggcacc ccacggcaac ggcggcatcg gcgtggtcgg taccggattg
    68101 tcactgtggt agccgaccgc cagccgcgaa gcatcggcat cgtccagcct gatcctgagg
    68161 ccggtcatcg cggcggcgtc gctgaagaag ccacgcagca gtgactggta gtcacgctgg
    68221 tggatcacct ccaggatgtg cgcggtcagt tcggtcccgg cgctggagta tacgtactcc
    68281 ttgccgggcg cgcgcgggat ccgtacggcg tgcagatccc tgaggaaatc cggctttccg
    68341 tagtgcgcgt acagcgcatt gagctcggcg ggcgtgcggt gatcggtgaa gtcttccagc
    68401 accgtgtttg cgcgctcggg cagcatgttc ggcagcccac tggtgtgcga cagcaggtgg
    68461 cggacccgga tgggctcccc ctggtattgc aggttcgggt agttgccctg caggaacgtg
    68521 cggacgtcgt catccaggct gagccggccg tccagcaccg catcggccat cagcgtgcct
    68581 gccagcgtct tgctcagcga gccgatctcg tagatcgttg catcggtcgg tgcgcctggg
    68641 ctgccggcca ccatctggcc gcgatgaccg atgaaactcc tgccccggtg taccaccgcg
    68701 atggaggccg agtgcagcaa gggctgctcg accagggtct gcgccacttc atcgatatct
    68761 gcttgaagat ccgccgaggg cttctgccct ccgcacccgg ccagcaggag cgcgctggac
    68821 atcagcaaga ccggcagccg gggcctgtac cgcatcgtct tcaagggagc ttccatgcgt
    68881 tggcgcttca ggggtgcgga aagagcgcac aacatagcgg attggcgcgc acgcatgcac
    68941 ccgccgggcg cctgcacggc tttggccgga ttgatgaatc acctggcgga actgtcgaat
    69001 gaccccgttc cggccgccga atacgcttgt catcctccac cacagaggat gccctcatga
    69061 gcgacaccac cgcggccgtc gccactccac gtgctgaccc gccgatcgtc cacgtcctga
    69121 tgggcttcat ctgcgtctgg cacaggcgcg aaccggagca ggcacgtgac gaggcctgaa
    69181 cgccactaca gggccggccc gacgcgcacc gggcgggtaa cgaagtgatg atatcgcttg
    69241 cagggcagga cgaggtcggt ccggactacc ccgatcggat cgacctgccg gtgatggtgc
    69301 ttggactgga acccattccc gatgcctggg aaatgccttt ccatgaacac cggaaggcac
    69361 aggtcatggt cgctacgcgt gggttgatca cgctggagac ccacgccggc ctctgggtgg
    69421 ttccaccgca gggtgcggtg tggattccgg gcgggctgac ccatcgggcc agcagcagcg
    69481 gaaaaccgca tggattcgtc gtgttcgttg aacccggagc ggtaacgggt ttgcctacgc
    69541 agtgctgcac gatggcgatc actccgttca tgcacgctct gctcgaacgc gtggcagatc
    69601 acccccaaca gtacgagcac ggcagcgcac aggcgcggct gatggcggtg ctcctggacg
    69661 aactcattgc cgcgccaccg gagtggatcc acctgccgat gccatccgag ccgaggctgc
    69721 gccggttggc cagtgcgatg ttggccgcgc ccgccgagcg ggcaacgctg gacgtctggg
    69781 ccggccggat cggcatgagc gagcgcaaca tgtcccggct gttctccggt gaaaccggcc
    69841 tgagcgtcag gcgctggcgc cggcagatgc acgtggtggt cgcgttgccg atgctggccg
    69901 gcggcaagac cgtccaggcc gttgcggatg agctgggcta cgacagcgcc ggcgcattcg
    69961 tgaccatgtt ccgcaagacc gtgggtgccc cgcccaagcg cttcctggcg gagcggagca
    70021 cccgactgcg cgggcccggc gctgaagacc agtctcagcg ctggtagtcc ttcaggaaca
    70081 accaggtgat cagcgtggca tccggcccct tggggtcggt gaacggcagg cccgactggc
    70141 tgccgctcca cgcatggccc atgccctgca ccacataatg ctggaccagc gtgcggccgc
    70201 cgtaggcata ggtatccacc gtataggcgc ggccacccgg tacctggccg tgatgggtgc
    70261 tggtcggcac atacttcacc gagtcattgt cctggccgtc atcggccaga tcgttggtct
    70321 gcaggaactg gcgcacggcc tgctggccgt tcaccgggtt gacggtgaga tcggcgctgc
    70381 catggaacac cagcaccggc agcggtcgcg gcgacggcga tccggagcac tgccaggcca
    70441 gcctgccgtt gctgtcgggc gagtagatgc tgcctgccag cagtgcatag gcgctgccgg
    70501 aaatcgtggt cgcgcccttg aacatgccac cggaatggat ggcaccggcg gcaaacacgt
    70561 ccgagtagca ggccagcatg atcgaggtca tcgcaccgcc ggctgaaatg ccggtgacgt
    70621 agacgcggtg cggatcaacg ctgtagcccg ccttcacctt gtccacgatg ccggccagga
    70681 tcgccgcttc gccgctgtcg cgcgcctggt tgatcggcag ctgccagttc cagcagcgcg
    70741 ccgggttggc ggtgacgttc tgtcgtgggt acaccacgat gaagccctcg gtatcggcca
    70801 catcgttgaa gcccgaggcc tcgcccatca ggttcggccc ggtcacgcag ccgtgcagca
    70861 ccagcagcag cggaagcggc tgggcgtcgt cgtagccggc aggtacccag acctggtact
    70921 cgcgggcgcc gaacagattg ccgtacaggc cgatgtccca atgtccggcc gggcctgcag
    70981 cggaagcgct gcccgctgcc aggcagaggc acagcatcag cagcacccgc ttgatcgaat
    71041 cgattgtgga gttcatgacc agatcctcct gcgtgggtcg tggatgaagg cgtaccgggg
    71101 agcgttcccg gctgggggcg cccccagtat ccgcatccca tggccactgc cgactggacc
    71161 taggtccact cgctggcggc ggatgacacc gctagccttg gctgcaggga tggcaagggg
    71221 ccatcaatac ggacatgcct gggggaggag tggatgaagc ggaacggttt gagtctcatg
    71281 atcggcgcat ggctggccgc agggccggta ctggcacagg aagcgccgcc ggccggccgg
    71341 tccgcctcgc cgaccaacct ggacagcatc aaggtcaccg cccgcaagcg cgaggaaacc
    71401 ctgcaggaag tgccggtggc ggtcaccgcc tttacttccg aagcgctgga caggatgaat
    71461 gtccaggaca tcagcgacct ggatgcgcag gtgcccaacc tcaccatcta cgccgcgcgc
    71521 ggcgccagca gcacggtcac cgcctatatc cgcggcatcg gccagtccga cccgacctgg
    71581 ggcgccgacc cgggcgtggg catctatctg gatgacgtct acatcgcgcg cccgcagggc
    71641 gccctgctgg acgtattcga tgtctcgcgc atcgaggtgc tgcgcggccc gcagggcacg
    71701 ctgtacggca agaacaccat cggcggcgcg atcaagtaca tctcgcgcgg cctgcccacc
    71761 cagaccgagg gcttcgccca gatcaccgtg ggcaactaca gccagctcga tgccaaggcg
    71821 gccatcggcg gcccgatcgg cggcgccgac agcggcctgc gcgcgcgcgt ggcagttgcc
    71881 agcatgaatc acgatggctt tggcgaaaac accatcaatg gccaaccggt cagcgacaag
    71941 caggtcaacg cggcacgcct gaatctcggc gcctacgcgg gcgacgactt cgacgtgcag
    72001 ttcgcactgg actggatcga cgaccagtcc ggcatgcgtg gctcgaagat gctggcgccg
    72061 aacccgttcc tgcgccccta cccgccgatg gacagccgct acgacatccg ctcgggaatg
    72121 cgcaacctca acaacgtgga gaccaagggc gcttcggcca cggtgaactg gcggccgaac
    72181 gaggacatcg cagtgaagta cgtggtggcc aagcgcgaat cggacagcga ggccaacatc
    72241 gacttcgaca ccacgccggt caagctggcc gacgtcagcg gcacctacaa cgacaaccag
    72301 gtcagcaacg aagtgcagct gaactacgat gcgggcggtc gcgtgcgcgg cgtggtcggc
    72361 ctgtaccagt tcagcggcga ggccggtggc cagatccaga acaactactt cagcgcgcag
    72421 ttcgccgaca accagggcaa ggtgctgacc gacagcattg cgctgtatgc ggactggacc
    72481 ttcgacctga ccagcaggct caagctggac gtcggcgccc gctacaccga cgaggacaag
    72541 cgcgcgatcg tgctcaaccg gctctatgcc gacccgggct tcagccggcc ggtggcggtc
    72601 accgcggatt tcgacaagaa gaccaacttc acgaacgtct cgcccaaggt ctcgctggac
    72661 taccagatta ccccggacat catggtgtac ggcctggcca cgcgcggctt caagtccggt
    72721 ggctacaaca tccgcgccaa cgcggtggcg gtgccgcgct cggccgagcc gttcgacgac
    72781 gagaccgtgg acagctacga gattggcagc aagatggcct tcctcgacca gcgcctgttc
    72841 ctgaacctgt cagccttcta caacaagtac aaggacatcc agctgtcggt gttcaccggc
    72901 ctggatacca atggcgatgg catcgatgat tccttcttcg gcgacttcac caatgccggt
    72961 gccggtactg tcaagggcct ggaggtcgag taccagtacc tgcccaccca gcactggctg
    73021 atttccggca acctggcctg gctggacacc aagtacgacg agtacatgga ccgcggcatc
    73081 aacgtggccc ggcagatgaa gttcaccaat gcgccggaat tctccggtgc gttgaacgtg
    73141 gaataccgca ccgagctggc caacggcagc aacctgtcgg cacgggtgag ctacagctac
    73201 cagagcgaag tgtggccgac cactgatctg agcccggtga tccgccagga cggctacggg
    73261 ctggtcaatg ccggtgtgat ctggcgtctg gatgatgcct ggaccttctc gctgcagggc
    73321 accaacctga ccgacaagga gtaccgcacc accggctaca acatcccggc ggtcggcacg
    73381 ctgattggct tctacggccc gccacgccaa tatagcctca gcgtccgtta cgatttctag
    73441 agcatccgat acgatttcca ggaagccccg tgcatgatgc agtcttacgt agatctgtac
    73501 tggaacagcg acgatggcct gcgcctgcac gcgcgtgacc atgcaccgga taccgggcag
    73561 gcggcccgcg gcacggtggt ctgcatcccc ggcctgaccc gcaatggcgc cgatttcgat
    73621 gcgctcgccg gcatcctcac tgccgtgggc tggcgcgtga tcgcggttga cctgcgtggc
    73681 cgcgccggat cagaacgtgc gcatgatccg tccagctaca acccgcgcac ctacgcagat
    73741 gacatggtgg cgctgctgcg cgcgcagaac atcgacaagg cggtgttcat cggcacctcg
    73801 ctgggcgtcc tggtgaccat caccctcgcc tcgcgcgcac cgcagctgat ttccgcagcg
    73861 gtgctgaacg acgccggccc gaaagtgccg cgcgaagcgc tggcgcggat tggcaagtac
    73921 gccggcaagc cggtgccgcc gatggatctg gagcaggcca cggcctatgt ggcgtcgatc
    73981 ggcaaggccg cgtttccgcg cttcagcacc gaagactggc gggcgatggc ggtgcgcacc
    74041 ttccgcccgc gcagcgatgg gcggctggaa ctggactacg acccggcggt gatccgcacg
    74101 acgcgtccct ggctgttgtg gctgctgcgc cccgtgctgt ggcgcgcggt gcgccggctg
    74161 accgcgcggg tgccggtgct ggtggtgcgc ggtgcgttgt ccgatatcct gccggccgat
    74221 gttgcccggc agatggcggc gacatcggag cgtgcccgcc tggtcgaagt gcccgacgtc
    74281 ggccatgcac cgatgttgtc cgagccggaa gcacgcgatg cgatcctggc cctgctggag
    74341 cgtgtgcggt gagcagcggc gccgtggcgg acgcgctgcc cagtgcgctg caggccctgc
    74401 agcggtgggc cgcggaggaa cgcgtgggcg ccggcatgcg catcacgcag gcaacgatcg
    74461 atgccttcgc cgacgccact ggcgaccaca actggatcca cgtcgatccg cggcgcgcgc
    74521 aggcggagct gcccggtggg cgcaccatcg cgcacggttt cctgctgctc tcgctcaccg
    74581 tgcaggacga cgtggcggcc ctggccggat ttcccggtgt tgcccatgtc ctcaattacg
    74641 gcctgaacaa ggtccgcttc ctggcgccgg tatccagcgg caccgacgta cgcgtgcgct
    74701 cgcagctggt gtcgctggat gcacgccagc cgggtcagtg gctgctcacc cagcgcaagg
    74761 ccgtcgaacg cgttgacgat ggcgagctgg cactggttgc tgagcagctg tcattgatcg
    74821 tgcttgcccc gtagcacccg cctgcccggc tccctgccta cactggagcg atgttgacgc
    74881 ctactgtcgt cctgttcgcc tgtattgcgt ggaccgtact gctgtttggc gtggccctct
    74941 ggggcgagcg ccaggggcac cggctggcgc acgcgtggcc ggccatctat gcgctgtcgc
    75001 tggcggtgca ctgcaccgca tggacctact acggcgccgc ttcgcagggc ctgcaatggg
    75061 gctttccgat tccaccgacc ctggccggga tggcgctgat cttcgccttc ggcctgccct
    75121 tcctggtgcg gctggggcgc ctggccaagc agcacaacag tgccaccatc gccgacctgg
    75181 tggtggcccg gctgcgcgca gatcgcggcc tcggcttcac catcaccctg gttgctctgt
    75241 tcggcatcat tccctacatc gcgctgcagc tgaaagccgt cagccaggga ctgggggcat
    75301 tgcttggcga tcgcttcgca ccggccggca cgcacctgga catgtcgttc tggttcgcgt
    75361 tgacgatggc ggccttcacc ctgctgttcg gcgcgcgcaa ggcgtcggcc accgaaccga
    75421 accgtggcat cgtggttgca ctgggcctgg aatcactgtt gaagctggcc gcgctgctgg
    75481 ccatcggcct gtatgcggca ttgtcggtgc accggtccgg catgccgctg ctggacagga
    75541 tggcgcagct gccgccaccg gccatcgtcc cggactacct caccatggtc gcgttgggtg
    75601 cgatctccgc cttcaccctg ccccaccagt tccatgtcgg ggtggtggaa ctgcgccaga
    75661 gctcggacct gaaaacggcg cgctggatgt ttccggtcta tctgctgctg atcggcctgc
    75721 cctcggtgcc gatggcactg tccggagccg cgcagctgcc ggcgtcggtg acgcccgacc
    75781 tgtacgtgct ggccttgccg caggccggtg gccaccatct gttggcactg ctggcctacc
    75841 tgggcagcct gagcgcggca accggcatga tgatcctgtc cgggctgacc ctgtcgatca
    75901 tgctcggcaa ccacggcttc ggttcgcgcc tgatcagtgg cttcgagggc ggcgtggcgc
    75961 atgccgacct gcgtccgcgc gtgctggcgt tccgccgtgc cggcatcctt gccgtgttcc
    76021 tgatgtcgtg gctgtacagc cgcgcgatga gcgataccga ggcgctcagt gatttcggcc
    76081 tgatgtcctt caccgcactc tcgcagctgg caccggcggt gctgctggcg gtgtaccgcc
    76141 cacgcacgcc ctcgccggcc atcgtcgcgg gcatcgtact gggttcactg gcctggttgt
    76201 ggctggtact gctgccgatg gtgctccctg cgccggccgc cagcgccgag ggcctgcact
    76261 ggctgacggt ggtctcgctg cggatgcagc ccggccacat cgccatcagc atgggcgcga
    76321 gcctggcggt caacctgctc accgttgccc tggtatcacg ggccgtgcgc ccttcgctgc
    76381 cacggcggcg cgacgcggtg gcggcggcca cgctgcggaa gaccgccggc cgcttcctcg
    76441 gccaggagcg tgcgcgccag ttgctggcag gagatgcggg gcagttgctg gatgacgacc
    76501 gggtcactgc cgtcgaacgt gagctgaccg ccgtggtcgg cgccggcatg gcgcgcctgc
    76561 tggtcgaggc cgcacgcgac gggggcgccg cgccgctgga cgcggtgacc cgtgccgtcg
    76621 gcgaagcgac ccaggtgctg cgcttcaacc agcgcctgct ggaagcggcg ctggaaaaca
    76681 tgagccaggg catcagcgtg gttgacgcgc agctgcagct ggtggcctgg aacagccgtt
    76741 acgctgcatt gttccgtttt ccaccggagc tgttgcaggt gggacagccg gtgatcaacc
    76801 tcaccgcctg ggcattggcg cagctgaaga tcggcgaggg ccccgctgac tctccgcagc
    76861 aggcactgca gcgtcgcgtc gcgcacatgc agcgcggcac cccgcatctc tccgagcggg
    76921 tcttcccgga caacaccatc gtcgagatac gcggcaaccc gatgcccggt ggcggctacg
    76981 tagccacctt caccgatgtc accgcgttcc gtcgcgccga ggatgcactg aagcgcagca
    77041 acgaaaccct ggagcgccgc gtgcaggacc gtaccgcccg gctgcagcag gcggtacagg
    77101 acgccgagcg cgcgaacgcg gccaaaaccc ggttcctgac ggccgtcggc cacgatctga
    77161 tgcaacccct gcacgccgca cagctgctga ccgatgccat gtcgcagcac atcgaatccg
    77221 ggttccttga cagtttcctg caccagatcc gaggtgcgct ggattccact gatgacctgc
    77281 tgtccggcct gctggacatc tcccggctgg aagccggcgg tctggtggcc gatccgcgcc
    77341 cgtttgcact ttcaaccgta ctggacccgc tggcgcagga gtttgcggta ctggcagcgg
    77401 cgcgcggcct gcagttccgc tacctgcgca cccgcgcctg ggtgcatagc gatccgctgc
    77461 tgctgcgccg cgtgctgcag aacttcctgg ccaatgccat ccgctacacc cggcacggcg
    77521 gcgtcctgct gggcgtgcgt cgccaaggcc aatgcctgtc catcggcgtg cacgacaccg
    77581 ggcccggcat tgcagccgag cagcaggcgg tggtgttcga ggaattccat cgggtggacc
    77641 gcagcaatgg ccagggcctg gggttggggc tgaccatcgc gcaccgcatc gcggccctgc
    77701 tgcacgcacc gttgcagttg cgcagcgtag tcaatcgcgg ttcggtgttc tcggtcagcg
    77761 tggcgcgcag tgcggcaccg gcggcaccgc ggatcgaacc gcctgccaac gccggcagca
    77821 ccctcagggg cacccgtgtg ctggtggtcg acaacgatgc cgacgccctg gcggccatgc
    77881 agcagctgct gctgtcctgg ggctgcgatg tcttcgccct gcgcggcgcc gagggcatcg
    77941 atgcgtcggc gcacgacgcg gcactgtggc tgttcgacta ccacctcgat gacggcgata
    78001 ccggcgtggc actgttcacg cgcctggctg cagcgcacgg gccacgtccc acggtgatcc
    78061 tcagtgcgga caccggcgcc gaaacccatg aggcggtgcg tggcgcgggg ctgtcattgc
    78121 tgagcaagcc cttcaggcca ctggcgctgc gctgggcgat caaccacctg ctggcctctg
    78181 ccgcagcggc agcgccctga gcggtcagcg ctctgctgcg tcttcaatct gccgggaggg
    78241 atcggccagc cccatttcat gcagaacgcg gatcgcctgc gcccgattgc ggacccccaa
    78301 ccgttccatg atccgtgtca tgtgcgcctt gacggtgcgc agctgcaccc cgagccggtc
    78361 ggcaatctgc ttgttgagca ggccttcggc caccaggctc agtacccggt actgatgcgc
    78421 cgacaggctg gccaggcgcg cggccaggtc ggcgtccttg ctgaacgctg cgacccgggc
    78481 caccggttcg cgcagcagtg aaggtatcca acgttcgcct tccagcacgg actgcagcgc
    78541 gcactgcagc tcgttcaggc ctgaactctt gggcaggtag ccggcggcgc cgaggtcgat
    78601 ggcacggcgg atcaccttcg gctcttcatt ggccgaaacg atgatgatcg ccagccccgg
    78661 ctgcaaggcg cgcagcgtgg ccagtccggc caggccgtgg ttgcccggca tgtgcaggtc
    78721 cagcagcatc aggtcgatcg gctggcgctc gagcacgtca agcacgccgt ccagtgaatc
    78781 ggcttcactg atctgcaggt cggccaccgc ctcttcggcc gcacgatgca gcgccgcgcg
    78841 gaacaggggg tgatcgtcgg cgatgagcag ggttggcatg tgcaggcgag agtagcaaat
    78901 cgccccgcct cggggaggcg tacctaggta cgctggcgcc gcgtgggcgg gcggctagtg
    78961 tggcggtatg aagggcggcc accgatacgt cgtccacgag gacaccccat gtcattcccc
    79021 gctgctgccg gcgcctccac ctgtccgctg ctgatcaagc agctgctgca cacgccgctg
    79081 gcggtgaacc caggccagga gattgtctat ggcgattcgg tccgcttcga ctaccggacg
    79141 ctgcaggcgc gcatcggcca gctggccggg ctgttgactt cgctcggggt caggcacggc
    79201 gataccgtgg cggtgatgga ctgggacagc aaccgctacc tggaggccta cttcgccgtg
    79261 ccgatgatcg gcgcggtgct gatgatggtg aacgtgcgcc tggcccccga acagattgcc
    79321 tacacgctca accacagtgg cgcgcgggtg ctgctcgccc atcgcgaatt cctgccgata
    79381 ctgggcggca tcgacgagca gctgccggat ctgcgcacgc gcatcctgct ggaggatgcc
    79441 gtcggcccat tgccggaggg tttcgtgacc gaatacgagg ctggcctgcg cgccgcctct
    79501 gcagtcacgc agttcccgga cttcgatgag aacacccgtg ccacgatgtt ctacaccacc
    79561 gggaccaccg gcctgcccaa gggcgtccat ttcagccacc ggcaactggt cctgcattcg
    79621 ctgaccggca tggccgcgct gggcagcgca gccacccagg ggcgcctgca tcgcggtgat
    79681 gtctacatgc cgattactcc aatgttccat gtgcatgcct ggggcctgcc ctacgtggcc
    79741 acactgctgg gcatcaagca ggtgtacccg gggcgctacc tgcctgccaa cctgctggca
    79801 ctgatcgcgc gcgagaaggt gaccttctcg cactgcgtac cgaccatcct ccacatgctg
    79861 ctggagcatc ccgctgcagc ggacaccgat ctggcccact ggaaggtgat catcggtggg
    79921 gccgcactgc cgcgtgcact ggcgcaacgg gcactggcac gcggcatcga catcttcggt
    79981 ggctatggca tgtcggagac ctgtccgctg ctgaccatcg cccagatcga tgccgaggcc
    80041 gtgaccgacg cggatgaggt tctctcgctg cgcaccaagg ccggcatacc ggtgccgctg
    80101 gtcgagctgc gcatcgtcga cccggacatg aacgacgttg cccacgatgg catcgccacc
    80161 ggcgaggtgg tggtacgcgc cccctggctt accgaaggct acctgcacga tccggcggcg
    80221 tccgaggcgc tgtgggcggg cggctacctg cataccgggg acatcggcaa catcgacgga
    80281 ggcggctacc tgcgcgtgac cgaccgcatc aaggacgtga tcaagaccgg cggcgagtgg
    80341 atctcgtcgc ttgccctgga ggacatcatc gccctgcacc ccgcggtcag cgaagtggcc
    80401 gtgatcggga tcgcagacac caaatggggc gagcggccgc tgccgctggt ggtcaggaag
    80461 gtcggcagcg acgtcacgga agcggagatc attgacctcg tcgccgcgcg cagccgctcg
    80521 ggcgacatct cgcgctatgc gattccggaa cgcgtcagct tcgtgcagtc catcgagcgt
    80581 accagcgtgg gcaagatcaa caaaaaaaag ctgcgcggga tgcatgatcc ggggcgaccc
    80641 tgaccgggcg gggccagagt gtgccccgcc agcgcactgg caccgatgct attcgccccg
    80701 gaagcggggc tctcttggct caggcagaag cggtttcggt ccactgctgg cgatcgagag
    80761 gatcggaaca tgacctcccc cactcttgtc cggcccgggc atatcgtccg gcggcaacca
    80821 cccgccatac tcgatatcga gctcccggcg cagcctctgc tggatctggg cgagatgatt
    80881 gacgaatgcc gaacgctcaa tcgcccggtg gaagaagtgc ggctcgtggt cgtagtcaaa
    80941 cgatgcagtg aacgccgcac tgcgaaagtg gcgatcaatc tccttcatga tcgccagttt
    81001 gagcaggggc tggataccca gaagcgtact tatcttcgca ccgcgcgaaa tgggtttcag
    81061 cacgttcgta cgggaggaca ggaatgtgta gctggattgc gtggccgccc ccagcatggt
    81121 ggttacaaag cgcgaccaat ggtcgtcgcc actcaccgtg ccgggcgtga agtgttcacc
    81181 cacggtgcca aggaagaaat gctccagtac ctcggcaaag tcctcgttgc aggcaatgtt
    81241 cgtgaccggt ggggtcggct ggacctgtcc gcatgcccat gttgtcctcg gcgtcccctt
    81301 cccgccatca ggcggataac gtgatgcatc aaaagccgcc gtgggcgcag caagcggtaa
    81361 taccgccgga tgcgggtggg cctggccatc aaagatggcc acatactggc caaacctgcc
    81421 cagtggattg gaaagactga agtcccaggg ttgctccacg ccccccgtcg gcgtcgggtc
    81481 cggacagtgg ccgaggcgac cgtcaccgtg aaaacgcggc cagtccttgt acaggagata
    81541 ctggatctgc ggcttgcctt ccgagatgtc gccgctgtcc ggatgcttgt tcctcttggc
    81601 ctgcaggagc agcgcccgcc cctcgacgga gtcggttgtc gtaacgaagt gctgccgcac
    81661 cagcagcaga tcgccgatct ccaccgcact gcggccttca ggcgtcacca atggggtctt
    81721 gtgggtaaaa atgctgttga cctgtacgct tgcgctgctg ccgagcgcgc cctgaaggct
    81781 ggcttcgagc tgattctgta tggattcatc gagaaacgcc gaaaccagcc cgggttcgtc
    81841 gggaatgttg gatgcgctgg gcgagtctcc cgcgcccttc caggccaacg catgagacag
    81901 gttgatcagg tcgcgaagtt cctgctgaag cgccatgaca gcatccttgt tatcgattcg
    81961 ggaacgccaa cgcactgagt ctcccgggat acgcccttca acgcaagccg ctggaagagg
    82021 actgcgcttc gctttccggc cgcgctgatg aactggttag aatccacgca gcaaggagcg
    82081 accatggact tcaccggctt cacctcgagg tttccgagca accgtcccct cgccgcgttc
    82141 gatcgagagc atcggctgcg gcagaagacg cgtctcgacg tgcctctgct ggcccagctc
    82201 tgcgtcgtga agatgaactc gaactgcctg gtctcagtgg atcggtggta cggcccccga
    82261 ggctttgtcg ccctgctggg tgcgataggc gtggcgttcg gagttggcgg catgtcgatg
    82321 ctgctgtggc tgctggtcgt ggagaagctg cccaacgaga atggcctctg ggcagccgtg
    82381 ttcatcagca tcgcgatgct tgcggtgttc actgcagcaa gtgcgtgggt agcgtgccgc
    82441 gaactgttcc gctggaccta ctaccccatc gtgttcgacc gcaagcatcg ccaggttcat
    82501 gtgttccggt tggacgggac gatcctcagc gcgggatggg accagatcta tttcaccttg
    82561 ggccgcggaa ccggaacctt cggctggcgc aactgggatg tccgcggcct gatcctggac
    82621 gcggacggcg cgacggtcag ggaagcattc gccttctgca tcgccacctc ccgcatcaag
    82681 aatgcgcatg cgcactggga attcctgcag cgctacatgg aggaagggcc ggcggcggtg
    82741 ctggatgcgg tgcagtactg catgccggtg gacggcaagc gcgagagcct tgcattctgc
    82801 aaggaacgca tcttcgccgc tgacgcgcag atgcctgcgg tgatgtggtt gaccatgctg
    82861 ccgttcaacc acctgcacgc gatgatgcgc tgggcggtga tgcggaccag caggattccc
    82921 atgttcccgc cggacatcga agcgcgattg cagcctgagc ccggcgatac ccatgtgcgc
    82981 gacgcatcaa tgaatccgcc ggacctgcgc tgatcacctc gccagtggcg agtcaaagcc
    83041 cgcaatgaag ctgactgcgc tgaggcacgc agcaagcagc atcaccagaa cgaacccgat
    83101 ccggcgcacc ccggcccacc atgcaatcgc cgcaaccacc gagctgccca gcagtgccgc
    83161 caatgccgcg cacgccagca ggatcggcag catcatcatc acccccattc cgccatatat
    83221 cccaccgggc ctggccagtg gcaggatggc gctgcccagg tagatcagca gggccacgcc
    83281 gaacaacgcg gcgagtgtca gcatccagcg acgcagcgcc ctgccctggg agggcgtggt
    83341 tgcaggatca gggcttggag tgttcaagcg gtggtctcct atggtgggcc cactggaccg
    83401 ggcccgctgt tctgttgcag cgaaagtacc cacgcttcca gcgccggcgt ataccgcatg
    83461 tcgccaccat aacggcgatc cggtgcgtga ggctcgttcg aaccgcgcac ccgcccacgg
    83521 aacaccttca tcggtaccga gatccgggcc agcccgctgg gcagcatgtc cggcctcaca
    83581 tccatgtaca ggctgtcggc cgaggtctcg acacccacct gcaccgcacc caggcgcttc
    83641 cacagatcca gcgcatccag gcaggcggaa ccacaggcgg catcggccac gatcaccacc
    83701 ctgcccgcgc gcacgggtac gacgggcgca gacgccggcg ccgcactcgc cttgggctcc
    83761 ggcggctcac gccacagggc ttccccccgc tcgcgtgcct gtgccattcc ctgcgtcacg
    83821 gtttccagca tgcgcagcag ctccggcgat gcatcgggcg cctgttccag cttctgcagg
    83881 aagccgcgca gctgcgcgat gttggcatcc gacgtccgcc attccaccca gctgtggtcc
    83941 ggcaacgcat ccacggcagc acgcccccat atcaatcgcg ccagttcgat gctccactgc
    84001 gacgcgccac ccgtgttgcc gcgaacatcc agcaccacca gcggcgcctg ttgcagcggt
    84061 tcgggcaccc gcccaagcgc ctcaagcaac gctgtcagtt ccttgaaatt ctgcgcggcc
    84121 ggatcggcat tgaagctgct ggtggtgatc cagtagccgc ccccgggcag ggcgcgccaa
    84181 gcgttggccg gccggaaact gcgacgggta tcggccagcc gctgcgtacg ctgcgctgga
    84241 tcgagtggcg tccattgcag cgcatacgcc gtctcacgcc catcggcgcg gaactcgcag
    84301 cggcgcggcg tgggcaggaa gggattgccc tgctccagca gtacttcgcc accgccctgg
    84361 atgcggctgg cctgcaggtt ccagcgccca ctgaagtcgc ccacccgacg cgcggcaagc
    84421 gtcgccgcat cgacgccgtc acaggacaac agttgtgcac ccaacggcgg atggcccggg
    84481 ccatcgtcca cgctcatgac cacctgcacg tcgccgtcga agccggtcag gaagcccggc
    84541 caccgcgtcg gcagctccgg cgcagcagca cgcgcgttga ggctgacatg gccatcattg
    84601 aacgaagccg cgtaaccctt catggcccac cagtagccgg cgaagctgtc gaccgtgtcc
    84661 gcgcgtgacc gcgcaacggc cagcgcatcc cgcagctgga cgacgaatcc ggggtgctgc
    84721 cggtccaccg tgcccgggtg actgccgcgc atggccgcgt cggcagcctc caggtccgtc
    84781 aacagcgtgc cccgccaatc cgtcgctgcg cctgccgcgc ccggcgcaac aagtaccgcg
    84841 gcaagcagca gccgcgcgat ggtcatgggt ccatcggtca tgggtccatc cctgccctgg
    84901 ccagtctcaa tgcaacggca ccttcagcat cgagggcgcg ccggccggcg agctgaaggt
    84961 caccgttccc cccagctggc tgatgccggc gtagcgcagg tccacggtgt cgaccaccag
    85021 ggtcaggcgg ctaccggccg gcaggttcca gctgctcgct tccaggcgca ggtcgagtgt
    85081 cttcggttgc cctggcgtgg cgccacgcag cgtgtacggc ttgtggctga tcagctggcc
    85141 attgcccagc acatcctcgg cgtacaggta ggcatacagc gtggtgttgg cacgactggg
    85201 ggtgacggtc aggcgcactt ccggcgcacc atccaggcgc cgcgcgctcc actgcaccgg
    85261 cccctgccag accccggcag cactacgccc gacaaacggc acgtaggcac ccggcggcag
    85321 gttgatcatc tgcagcgcgc cggaggccat cgccacgccg gagttggccg cggtcagcag
    85381 cccgctgccg atgcggtagt tccagccggt cgtgccgccc ttctcggcca ggccaccggt
    85441 cggcagcagc aggcccgagg gtgcggtcag cccgtagctg acggcaccgt cgctggtcgc
    85501 cttccagtcc ggatagcggc tccagctgcc cttctgtgac ttcagctgca ctgccggttg
    85561 gcggtcgatg ccattggcca ccgccttcag gtagtgatcg aaccagtcgc ccacctggtc
    85621 gtagacctcg ttgggaatgc ccagtgcccc gaacgcttcg ttcagcgcat ggtcgccgtg
    85681 gcgcagctgc agctgcttgg gccccttcag ccggttgaag aagtccacca gctggcccgg
    85741 tgggaacagg ctgtcgttga acgcattggc caggaacacc gccggctggt tggcgttgat
    85801 ctcgtcgatg ctcgccgcag gactgcgctg ggccgccacc ggcagcagcg agtccactgc
    85861 gccctggtaa ttgccgacca gcacattgcg gttgatggtg gccagctccg tgccggggcg
    85921 cccggtcgcc aatccggccg ccaccagcag ggcgatcccc tgcgcgctgg gggtgtcgtt
    85981 gctgtacagc gaggcctgca gatcggccca gccgctgagc gcggccaccg ccttgatgcg
    86041 cggatcgcgt gccgccgcca gcaggctggt accggcgccg taggagatgc ccgaaacgcc
    86101 gatccgggac ggatcggcgc gggtgttgtc cagcgcccag tcaatcagcg cgctgacatc
    86161 ctcgaccgtg gccggcccgg cgatgtcgat gctgccgccg gactcccaga agccacgcga
    86221 gctgtagctg atgaccacat agccacgccg tgccagcgcc tgcgccacgc ccacgtactc
    86281 gacgctgggc acggcccagc tgctgggcat caccagcagc gggtaacggc cgctgcccgc
    86341 atcctgcggt tcgatgacga aggccccgag aggcgttcca tcccagctgg gaatggtccg
    86401 gtgggtggtc ttgaccgtgg cggcccaggc gctgggggcc aacccggtca gcaggagcaa
    86461 cagcagcaga accttgcgca tcgtcgtctc tccccgtcgg tggtggtgca acggctcgga
    86521 ccgtaccagt gcgaatggtg gctggcacct tgcgacgcag catgacgctt gctgcttcgc
    86581 ctgccgctcg gagcactgct gatcgcgccg ggtcccaagc acggatcgac gtcatgaggc
    86641 ggcacctctt ctgccttgcg gcacgggcgc catctgcccc acataccgtg atggcaggca
    86701 acgcgacgcc ctagcacgcc cgcgtttcag ctacgtcctc ctccatctga cgcatcgcca
    86761 gtgcttgcgc gctgtcacag cttcgtcgtt tcgtcattga ccgaaagacg ccagcttgtg
    86821 acgcttacga caccgcacgg cctccgcggc cctgtcgtcg cggtcacgtc tcaccgcagt
    86881 ccgcagcacc cctctccgca accgattccc cgacctcgca ccggcctggt cgtggcggac
    86941 ggctgcgccc tgaatcttct gctggagcac cgcaatgcgc cttgcaagct tcttcctcgc
    87001 gttcgtcctc agcgccttcg ccggcgccgc ccaggcccag gttgtcaccc tcaacaaggg
    87061 cggcttcgtg ctgacctacg actgcagcat ccacagcgcc acccgttacg aatacacgct
    87121 caccgccgat accggttcgg ctgcgcgccc gtccagcttc tacaaggacc cggacctgcc
    87181 ggccggctgc ctcggccaga gcagcaccgc gtcgtacgcc agcatcaggt ccggttatga
    87241 ccgcggccat ctggtgacct ccaaccacat ggactacaac gcgacctaca tccgccgcgc
    87301 caactacatg accaacatcg tgccgcaggt gtccagcttc aaccagggca tctgggtgaa
    87361 ggccgagaac gtggccgagt gctaccgcga catcgcgccg gtggacgtct atggcggcgt
    87421 ggtctacggc gacgcctcca acgactactt cctggccagc catggcatcc cgacgccgga
    87481 attcttctgg aagacgatca tcacccgtga cccgaacacc ggcaccgcca aggcgatcag
    87541 ctggatcatc cccaatgaag ccaatctcgg cagcctcgac aactacctgg tcaccatcgc
    87601 cgacctggaa gagctgttgg gtgccagcta cgtggcgatc aatgcgccgg cctcgctgaa
    87661 gaacatgctg ccggccacca cctggccgca gccggcgggc tgcgacctga gctgatcggc
    87721 ccgccgcgtc gaggcaccct gtgatcgtcg ggtgcctcgt cctcgccgct atgggaaaat
    87781 ggcggatacc cgcgcccaac cgcctgcccc aggagctgta gatgtcccgt tttcccttcg
    87841 atgccgtgct gttcgactgt gacggcgtgc tggtcgattc cgagccgctg gtggcccgcg
    87901 tgctctccga aatgctgacc gagcgtggct ggccgctgac cccggcacag gccggcgaag
    87961 tgttcctcgg ccagtcggtg gcccatctgg ccggcctgat cgaggaacgc accggcaagc
    88021 cgttcaccga ggaatggctg gaggagttcc gcctgcagcg caacatcgcg ctggagcgtg
    88081 acctgcaggc catccagggt gcgccggggg cggtgcgcgc gatcgcggcg gccaccggcg
    88141 gccggatcgc ctgtgcctcc ggtgccgacc tgcacaaggt gcagctgcag ctgggcaagg
    88201 tcggcatcct cgatgccttc ggcgaccacg tctacagcgg ccaggacatg ccgaacacca
    88261 agccgcaccc ggatgtctac ctggcggccg ccgccgcgct gggcgtggac ccgaagcgct
    88321 gcgcggtgat tgaagacacc gtgaccggcg ccaccgcggg cgtggcggcc ggcgccaccg
    88381 tgttcggctt cagcgaaggt ggcccgcacc acagcacgcc ggaggcgctg cgcgcggccg
    88441 gcgcccaggt catcttccag cgcatggaag acctgccggc cctgcttgcc ggctacgcgg
    88501 tcgacgcggt cgcctgatcc acgctcagcc cgcagcgccc agcgaggcgc tgcggtgctt
    88561 tgctgcgtaa tgcagcgcga acaggtacag gccggtgaac agctgcagga acaacggggg
    88621 cagcggcgag taggtgatcc acgccgcagg ttcaccctgg cccatcgcgc gcgccacgaa
    88681 gttggcgatc accgccaggg tgaacacgat cgaggtccag cggtgcaccg gccgcgccca
    88741 accaccgcga ctcattgacg acgcctcgct tcggagcggg cttcaatcat cttccagccg
    88801 ttcccggacg gatcacggaa tccggcgtcg atggcgccga agcgctcgac cggtgcctgg
    88861 atgaactcca cgccctttgc ctgccattgc gcgtaacgtg cctggcagtc gtccaccgcc
    88921 agcaccagcg gtggcatcgc ccccttggcc accagctgct gcagcgcctg cgccgtcgcc
    88981 gcgtcatggg tcggcgggcc gggaacgaac aggccaagct ggaaaccgtc ctggccgggg
    89041 ctgcgtaccg tcaaccagcg gtagctgcca ttgcgcacgt cggtgtgcac ctcgaaaccg
    89101 agcgtgccga cgtagaattc gagtgcttca tcctggtcgc gtacatacag gccgaccgtg
    89161 ttcacggtat tcgtcatggg acctccctca ggtgcggtcc acgttagcaa cggcctggcg
    89221 gcggcgcttc tccaaaactg cgatgttgag gtcaggccgc tgcgccgcac gggcatggca
    89281 ctcgggtacg ctctccgccg cggcgtgccc ggcgtgcccg gcgcgctcgc ggtcacgcac
    89341 gttgcccggg ctgtcgccgg tgatgtcgcg gaagatccgg ccgaaggtcc ccaggctggt
    89401 ccagcccgtc tgcgccgcga tctcggtgat cgccagctcg gtgtcgcgca gcagcgccac
    89461 cgcccgttcg atgcgccggc tgagcaggta acggtgcggt ggcaggccga aggcctgctt
    89521 gaacgagcgc gcgaagtggg cgggggaaac cgcgctgacc tcggccaggc gggcaaccgg
    89581 ccagtcttca tggctggccc ggtccatccg gtccttggca cgcaacaggc ggcgcagcag
    89641 ttcggggctc tggttcattc gcgcagggca agggcggcgg tcgttggccg cagactgggg
    89701 gggacgggcg gcggcgtcaa cccggctcag cgctgtgccg gcagctccag ccggtgcttg
    89761 cggcaaaggc ggtacaccgt cacccgcgag atctgcatct gccgtgcgca ctcggacacg
    89821 ttgtagccgg tgtggcgcag cgtctgcagc agtacatcgc gttcggcctg accacgcgca
    89881 tcatgcagca tcgcgctggg cagcgcctcg gccggttcgc ccagttcaag gtcacgctcg
    89941 ctgatcagct cgccctcggc catgatcgcc gcccgctgca cgcggttgag cagttcacgc
    90001 acattgccgg gccagccaaa gcgccgcatc gcctggcttg ctgtgggcga gaagccacgt
    90061 gcacgcaccg tgtggcgccg ccggaagcaa cgcaggaagt gctcggccag cagcagcaca
    90121 tcggcgccgc gctcgcgcag cggtggcatc agcaggcgca gcacgttgag ccggtaatag
    90181 agatcgctgc ggaaccgccc ctgcgccacg gcctgttcca gttccacgtg ggtcgcggcc
    90241 agtacgcgga catcggcacg cagcgactgg ctgctgccga cacgctcgaa cgtcccctcc
    90301 tgcaacaccc gcagcaggct ggtctgggcc tcggcgggca gatcgcccac ctcatccagg
    90361 aacacggtgc cgccctgcgc ggattcgaac acgccgatct ggcgcttgtc ggcgccggta
    90421 aaggaaccgc gctcgtgccc aaacagttcc gactgcacca ggttggccgg aatcgcaccg
    90481 cagttcactg cgatgaaagg cttgccggca cgcccggaca gcgcatgcag cgcatgcgcg
    90541 gccagctcct tgccggtgcc ggtttcgccg gtgaccagca ccggcagctc caccggtgcg
    90601 aacttgtgca gcaccgtgcg caccgcatgc agcgccgggc tttcgccgat caatgcgcgc
    90661 ggcccctgcc ctgcgcaggc ctcgtcggtg ggcagatcat ccgcatcgaa ctggctgcgc
    90721 atcgcgcaga ccaggtcctg caggccgaat ggcagggtga accgtgcagg acagtgctgc
    90781 agcacgggca accatgccga cggtgtggca cctgcgcctg gcggcagcac agccagccag
    90841 ggcagatgcc ggtgctgttc gatccatggc gcgagcagct gcaacgccgt tgcgtccagg
    90901 tggcgaagat cgatcacggc cagcaatcga tcacggccac gcagcccgat cgccatggca
    90961 gggtcaggtt gaatgctgcg cacataccaa ccggcggccg cgagcgcact gcgctcattc
    91021 ggcagcggct ggccaaacca cagcacacag cgcgagcttg aagcttccgg gaccgccgcc
    91081 atgcttcccc cagcatccgg acaccgtcgg cgggctgtca gtcgatcgcc ggcgtgccgc
    91141 cctccgccgg gacttccacg gccacctcgg cggcctttgt tgggcggatc ctagcgccgc
    91201 gctaaacggc ggcgcaatga gcagcgcgtc aagaaatcac cggctgaagc ggcaccgttg
    91261 cagtccgcga cggcacctgt aacaacaatg cgacagtcag ccgccccctt gccctgtggc
    91321 gcctgcgggt tgcgcaatcc caacaatttc ccgacgccgc tgtaacgccc cggcagcacc
    91381 ccaccccgcc gcagcgccgg catcggctgc tgcaccagcc tttggcagtt ggcacggttg
    91441 atgcgtggtt ccgccgcacc catcgcggga gatcggcatg gacggcacca ccctgattcg
    91501 tggcctggct gcatcgctgg cccttgccct gctggccgtc gccacgggtg caggcgcgtc
    91561 cggcgcccgc cagggggtga aggcacaacc gggcgaaata gtcctgttgc gcgatgtcgc
    91621 ggcccggccg gcctaccgca tggcgccacc gggcatcgcg ttgattgccg atccgaagcc
    91681 gcagcgcgag gtcgccgcgg cgctcggaag cggtgacccg gcctccggaa tggatgagct
    91741 cagcgatgcc gactacgcgg gaatgggtgc aggccatatc actcccacga ccgcgccggg
    91801 cggcaccacc gttgaacgcg ttacccagca ggccctgggc ggcacgctgg gccgcaacgg
    91861 cgacggcatg gtcggcagca gtcttggcgg cacgatgagt ggcccgctgg gcgcggtcgg
    91921 caacagcacc cgtggcatcg ccgatacggt gcgcggcgcg ctgggccagt tcccgctgca
    91981 gggcaccgcc ccggcaggtg gcaagtgaag gccctggcgt ggccgctgct ggcggtgatc
    92041 gccgcgccgc tgtccgcatc ggccgacgac tacagcggca tgctcgccta tctggacctg
    92101 gcccgcatcg agggccgcgc actggcaggt gccagcggcg ccatcgcggt gaaccaggcg
    92161 gcaggcgatt tcaacctgca ggccaatctg cgcggcatcg cccgcgctga acgcgccgat
    92221 gtggccatca gcgcacaaca gctgcagaac ggcaaccggg tgctgtccgc acccctgcat
    92281 gccgccgcgc acatcggcgg tgaggcactg gcaggcgcca gcggcattgc ttcgatcaac
    92341 caggccagcg gcagcgccaa cacgacgctc aacgtcgtca gcgcgacgct ggcccgacag
    92401 ggcatacgcg aaaccgacga cacggccctg gccgccgaag gttccgcgtt ggcagggggg
    92461 cgggacggcg tcgatcgcgg cgctgcgacg ggaacccgca gcgtcggtgt agccagcacc
    92521 gcactgcggg gattcgacgg ggtcctgcaa ctcaatcaga tcgcgggcag cggcaacgat
    92581 acggccaacg tactgggcct cgtcgtgcag gaccgcccgt gacaaccacc caccgatgca
    92641 ccatccgatg agagagaggg caccatgaaa gcgaccgtca aacggaccat gctcgccatg
    92701 gcgattgcca ctgcctcgac cgccgctgcg gccaatggct gggacaacca gaacgccaac
    92761 gcgaacatca accacaacca caccgtcagc gaaacccgca acgacaccca caatcacacc
    92821 gacaacgacg tacgcaaccg caccgtcaac gtcaatgtgc agaagcacag caacatccag
    92881 tccgacgaac gcaaggaaaa gaacaatcac ggcgtcgacg tgaacctgga aaaggacctg
    92941 cgcctgagca ccgacgtcaa tttctccggt gatccgacca tcaccggcga catcgacctc
    93001 gattcggcgg ccatcgcggt gatcgacaac cgccagtcga tcagcaacaa cgccaccagc
    93061 aacagcctgg tcaccaaccg tgcctcgatc ggcgacagcg taggcgcagg cgcgtccggc
    93121 aatctcggct tcaacgtggt gtccggcgac aacaacgcgc aggacaacgc cgcatcgctg
    93181 tcggcggcgg atgcgtcctt cagcttcggc atggccgacg ccgaagtgtt cgtcaaccag
    93241 gccgggttcg gcaacgtcac ccagaacgct ggcgtcacca atgcggccac gcttggcggc
    93301 aatgccttcg gcggtgcctc gggcaacatc ggcgtgaaca tcgcgtcggg caacaacaac
    93361 gagcagaaga acgcgctggc cgcctcggtg gcgaccacgg ccgttgccca atccagcatc
    93421 agctccaacc aggtctccac cggcaacacc gtcagcaacg ccggcttcgt gcagtcctac
    93481 accgacaccg tgcaggtggg catgcgcggc agcgtcagtg gcctgaccct gggctacggc
    93541 gccggcacct atcgcggcac cggcaatgcc taccagatgg ccaactacta cctggatacg
    93601 tggaacggcg cgctgccgca tccgggtggc aacagcaccg gccacatcga cctggacaac
    93661 gagatccaga acgccacgat gaaccccaac cggccggggg tgggcggcct gggcttcgac
    93721 acgcgtgaga gcggcaccag ccagttcgtc gagctgggcg tggccgatct gtacgccagc
    93781 ctcagcggca cggtcagcac cacgcgctgg gtgaacgtcg atgccaccaa cacctcggcg
    93841 ttgtcgggca gtgccttctc cggcgcctcc ggcaacatcg gcgtgaacgt ggcatcgggt
    93901 accggcaacc tgcaggccaa cagcctcgcc ctggcagtcg cccagcccag caccggcggt
    93961 ggtggtggca gcggcgagta agcgcaacac cccggccatc cgccaatgac cgggttccgg
    94021 gagcccctgt tcctcctccc ccttggaaca ggggctcccc cctgctgccg gagaacgcga
    94081 tgttctgctg ccgaccttca acctggctgc tggcgtgcct gttgctgctg ggcatcaccc
    94141 ccgcgtgggc gggcgaggtg cgcttcagcg gggtactgcc caatggcgcc ctgctgcagc
    94201 agaaagtgga gagcatgcag gagcggcgct accgcaacgt ggtgcgccag cacaccgatt
    94261 acagctgtgg cgcggcggca ctggccacca tcctgcgcca tgcctaccac ctggacaccg
    94321 acgaggcgac ggtgatccag ggaatgatgg gggtttcaga ccccgcactg gtggccgagc
    94381 gcggcttctc gctgctggac atcaagcgct atgtggaatc actgggcatg cgcgggcgcg
    94441 gctaccgcat cgacgaagcc cgcctgcgca ccctgcgcgt gcccgggctg gtgctgatgg
    94501 acgtgcgcgg cttccgccat ttcgtggtgc tcaagcaggt gcgtgaaggc atcgtcgaag
    94561 tggccgatcc gatcctcgga aaccgcagcc tggcactgcc ggacttcctc gccgcgtggc
    94621 cgtcacgcgc cgtgttcgtg gtgatcggca gtgatttcga ccgcaacacg gtgctgctgc
    94681 aacccagcga acggcccagt gcccgcgcgc tctacgcgcg gcaggggccg atcaccgatg
    94741 ccgagctggt cgacttcggc ttcagccatg ccgacctgtt ctgaaggagg cttcgccatg
    94801 atccgtcttc ccctgttgat gaccctgctg ctgatgcttc ccgcgctgac ggtgcgggcg
    94861 gcggacgcag cgccgggtcg cggcctgaag gaaattccgg accccgaact gaacctgatg
    94921 cgcggccgct acacggtggg cggcaacagc gtggcctggt tcggggtgac gatggtttcg
    94981 cagtggcagg ccagcaatgg cacggccctg cagggcacgt tgaccctggg catggatttc
    95041 cgcggcggtg gtgcacccaa gctaagcttt cagcccagcg tgcatgtcac cgccgccgac
    95101 gcgccgctgc ctgtcacagc gggccgcagc atcgacagca gcggcctggc caatgtcagt
    95161 gggctggtgc agagcgtgca ggtcgccggc gatggcaacg ccgcgcgcaa caccaccacg
    95221 ctgctggtgc gtgacggcga cgttcccgcg atgcagtccg acagcgcgca ctcggccagc
    95281 gcgcagcagg ccggggtgag cgccagcgcc gtgctcgatg gcaatcaggc gcgcctgcag
    95341 ctgcaggtgg atggccaggg cctggtacag caatggatac gcaatggcag cgtcggccag
    95401 ggcattgccc tggccggtga cggccaggca gccagcaacc agctgcggct ggagctggta
    95461 cgcaacaccg cgggcggcaa cctgccgttg agccagaacg tggcccaggc gattgcgttg
    95521 aaccgcggca tggggccggg ccagtagtac ggcgcggcat tgggggacgc gttccacaac
    95581 gcaggacacg aacatgcata cccttctgag gatcaccccg ttggcgctgg cggcgctggc
    95641 gggcaccgcc ctcgccgcgc cgccgacggc cgacgacaac gccgatgtgc aggccctggc
    95701 caaccagctg gagcagctga agagcaacta cgcccaggaa gtccgacgcc tgcgcgagct
    95761 cgacatgcag gtgcaggcga tgcaggcgcg attgagtggg cgcacggggc ctgccgggcc
    95821 ggcaacggcg gcggcaaccg gcacgggcac gggcacgggc acggaagtcg agcatggctc
    95881 gactctacag gcagcgccgg gacagacagc gcccggcggc gaaggctacg ccagcactgc
    95941 ggccgaagcg cagcaggcca ggcaggagtc gcggcgcagc gtggatgatg tgaagcagca
    96001 gcaatcggcc ctgttctcgc gccgcttcac catcgagaac agcctcacct acgcccgcta
    96061 tgaccgcaag cagctcaccc tcaacggctt cctggcactg gatgcgatct tcctcggcaa
    96121 catcgccatc gagaacgtcg aatccgattc gctcacctac aacctggccg cacgctgggg
    96181 cgtcagtccg aacctgacgc tcaacctgga cgtgccgtac ctcgcacggc gcacggtgta
    96241 ccagaaaggc ggtgccgggg gtgcggccgc cgccatcgcc caggaacaga ccaatggcaa
    96301 tggcctgggc gatattggcc tgagcgcgaa ctaccgcctg ttcggtgagc gcggctggcg
    96361 gcctgaaacc gttcttaccg ccggggtgac cgcacccacc gggcgcgcgc cctacggcct
    96421 ggactggaag gtgatcgagc gcgacgacga tgactacatc cgcttcgccg taccgaaaga
    96481 acagcccacc ggcaacggcg tctggcaggc caatgtgggc ctgtcgatgg tcaagaccgc
    96541 cgacccggcc atcctgttcg ccaatctggg ttacgtacat tcgttcccgc gcggcttcaa
    96601 cgacatcgac agcaaccccg acaccgtcaa tcccggcgat gtgaagctcg gcggctcggt
    96661 gtatttcggc gccggcgtgg cgttcgcgtt caacgaacgc accagcctca gcctgtcctt
    96721 cagcgaccgc atcagcgccc gcgcctcgac ccgcttccag ggcgggcagt ggatgaaggt
    96781 gatcggcagc gatgccaatg cggcgtcact gaatctcggc gtgacctatg cgctgaacca
    96841 gcacaccacc ctggtgaccc tgctcggcat cggcctgacc ccggatgccc cggacttcac
    96901 cctggccttc aagatcccgt acatgctcta gcccccgtgg cccggcgacg gcgaggctgt
    96961 ggcccgccgt cgtcgattcc gccgcatcgg tgccgatcca cgcaatggca ccgcattgcg
    97021 cgtcgatttc gccgattccc gcagtctccc cgtttctagc atgcccctga gccggccatt
    97081 cccggtcgcg cactcatgca ggggcattcg catggcaaac atcgcagaag acggccagct
    97141 tggctggatc gtcagcaagc gcccgaccgt ccagggcatc gacatcggca agggcggcga
    97201 ggcgctgccc gacaacacgt atggcatcga gatcgagttc tgcacgcacg acagcgtgat
    97261 cttcgcgttc acccacgtgg tcgcagcgtg cttcgacatc gctggcaccg agccatggaa
    97321 gctcgaatcc gattccggca acgtcttcga actcgtcacg ccgccgctgc gcttcggcga
    97381 cattgatcaa gcctacgcct tcaaggaaca gcttgtggcg atgctgcagg cgtccatcca
    97441 gaaagcagag acgcagggcg tcaacgccat cacgctcggc gactgggcgg gacagttcgc
    97501 acccaagctg gtcgaactgc tcaacaccca catcaacacg ggccagctga agctggagct
    97561 ggtggcactg aaggccatcg actatgccag ctggaaggag gtgggcgaag ggttgaacgt
    97621 cggcaatgta gacgatggca tcaacattcc cgccgggctg ctgcgccaca agctgcgcag
    97681 gctcgactgg gaaagctata ccccgggcat catcctggcc cgctgcagca aattctggtc
    97741 cgaaggctac gcctcgcaga tgaacctgcc gatgacgctc agcggctact tcctgtacat
    97801 gatgtacaag acccacgaca agcactactc gcaagcggtt cgtacacagc agaagctgag
    97861 cggcgaaaag gccggacaga agctgacggc ctggtactgg cggcatgtgc tgctgcaggc
    97921 gtggtgccga taccagcgtg cactcggtgt ggaaccggag gcgaggaagc tgttctcgcc
    97981 cgaggcgatt ggtcgctccg ccctgctcta cctggtggtt ggaaaactgc tgaccggcgc
    98041 cctggccgaa ctcggggaag cgccgcagct ggagctgcag cagaaggcct gggatgccgg
    98101 ctccacccgc gcgatcgatg ctgacgagcc ggaggtgacc ctgggtgact gggccccgta
    98161 ccacagcgcg ctgaaagacc tcaccggcat ctggctgaag gcctcgctga tggatgtgat
    98221 gcgcacccag aacctgcaga cctatacctg ggccgtcacc gagctgccgc gggtgctggc
    98281 caggaccgaa gtgtgggaga acgcgcttct gaactggaaa gggatggagc ggatcaaggc
    98341 gatgggttca accattgaat ggaccgacct ggaagagttc gccgagcctg agcgacggca
    98401 ggtgctctac gaaaaggtgg tcgaggtggc cggaagcctg gccgagcatc tgaaacacct
    98461 gtccccggac aaacccgggc caccggatct ccctgacgag aaggatcggc cgttcctcga
    98521 tcggcgcaat accccggcgt gggaggcccg ctacgacacc ctcctcccgc ccattgcacc
    98581 gcgtgagaac acgcggaacg aattcaccta cctgatcgag catcgcaacc actgacacat
    98641 cgccctgatc cgcgctgccg cccttccatc cactgcggca ggcacgacgc tgttccaacc
    98701 ggagaaacga aatgacacag gtctacgcaa cacttcgctc ggacgatcag tacctgatcg
    98761 cacgcaagca gatcaccaat gcctggtgga gcggctatgc cgcgccggtg ctggtggccg
    98821 aggcggcgtc cgccctgacc acggtggtga acgttgccgc aggcagcgcc gtcaatgccg
    98881 gcgcggtcgc cgccatcaac gcgtcgctgg ccaatgccgt gcttgcagcg acgtctgcgt
    98941 ggcccgcggg ggctgccgcc aatggcgtcg ccacgcggga tgccatcaat caagcggccg
    99001 ttgcggtcaa caacgccggc caggtcctgg cgcagctgca ggcagcattg ccgacggtac
    99061 tggccgccgt ggaccgggcc gccgccatgg gggcggccga ttgggtcgcg ggtggagggg
    99121 ccgtgccggc ctgggtccag cttcaaaatg taggcatccc cgcatggccg gacccgaacc
    99181 tgcaggcgac cgtcaacgcc gcacagcggc gcatttccgg ctgggccggc tcgcaatcgc
    99241 cgcgcctggt caaccaggcc gggcagtggg cactgcccgg gggacgcatg tcggatgcgg
    99301 aaaccgccga gcatgcggcc aggcgggaat tccaggaaga aaccggcgtc gagctggacg
    99361 caggttatgt gatggcctac cacacgctgt tccagaccgc gccgggaggc gccgatttct
    99421 acctggtctg ctttgacctg cccggcggcc aggacatcgc cgacctggtg acacggatca
    99481 acgcgaacct gatggcccag accggttggc tcaatcgtcc gaccgccggg tcggtggtcg
    99541 actgggaact ggatgcggtc tgcaccgtgg cgcaggacga gctgagcagc tctctgggga
    99601 cattccagcc cgtctcgatt cccgacacgc tgcggccggt gcccgtgccg atgcctgccg
    99661 gaggggccgc cctggcggcg tgggagcgca ggcagcgacg ctttgccgag tcccagtcca
    99721 tcgactggta cctgcgcatg gcccgctaca ttgaacagca gtaggcggcc gacgcggatg
    99781 cggagaaatc gatgatgcgg cgacggcacc acccgcatca cggccccgct cttcacacca
    99841 tttcccccgc attctccgtc gattccacca atccagcagc agcgcttgtt tctactctgc
    99901 atccacggtg aagcacacgc agttacgcac cacgcaccgt gacactggat accacgcact
    99961 tccacctttt cgcaggagca ggacatggca tttccaaccg cggtaaacga ccagatcacc
   100021 gattcggtca ctcaggccaa caccaaggtg ctgggcgatg cgcccgccgt ggcggtgggc
   100081 aatctgtacc aggccaccgc acaggcgctg gccaatgcgg cgcacaacgc gaccaacgcc
   100141 cagcagcagt cctatgtgac cgcgcagtcg gccaccacca tgggcgtggc cacgctgtac
   100201 tcgatcgaca ccgccaccac ggccgtggcc agcaaggaaa tcctcagcac ccgcgtccgc
   100261 ggcctcggtt cctgatccgt cgttccgtag ctgatccgcc aacctcaagg agctcgacat
   100321 ggcattcccg accgctgtaa acgaccagat caccgattcg gtcacccagg ccaacaccaa
   100381 ggtgctgggc gacgcgcccg ccgtcgccat gggcaacctg taccaggcca ccgcgcaggc
   100441 gctggccaac gccgcccaca acgccaccaa cgcccagcag cagtcctacg tgaccgcgca
   100501 ggcggccacc accatgggcg tggccacgct gtactcgatc gataccgcca ccaccggtgt
   100561 ggccaccaag cagatcctcg gcgcgtgatg cgccggcagg caaggagctg agccatggca
   100621 tttcccacgg ccgtcaacga ccagatcacc gattcggtca gccaggccaa cctgcaggtg
   100681 ctgggcgtgg cccccgccac ggcgatgggc acgttgtacc aggccacggc acaggccctg
   100741 gcgaatgcag cccacaacgc gacgctcgcc cagcagcaga tgtacgtcac ggcgcaggcc
   100801 gcgaccacga tgggcgttgc actgctctac gccgtcgata ccggcgccac cggcgccgcc
   100861 acccggaaga ttctcggctg attccactaa gtgccggcag tctccgttcc tgtagtgctg
   100921 tccacccaag gagtttccac catggcattt cccaccgccg tcaacagcca gatcaccgat
   100981 tcggtttcgc aggtcaacac caaggtcctt ggtgatgcgc cggccatcgc aatgggcaat
   101041 ctgttcgtgg ccaccagcca ggcactgtcc aacgccgcgc acaacgccac caacaaccag
   101101 cagcagtcct acgtgaccat gcaggcctcg accacccagg gcgtgtccac gctgtatgcc
   101161 atcgacactg cctccaacgg cgtagccacc cgcgaaatcc t
//
LOCUS       DAOKIP010000002        71896 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.002,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000002 DAOKIP010000000
VERSION     DAOKIP010000002.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 71896)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 71896)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..71896
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.002"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(75..1361)
                     /gene="thrC"
                     /locus_tag="QEL58_000093"
     CDS             complement(75..1361)
                     /gene="thrC"
                     /locus_tag="QEL58_000093"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HDS1674622.1"
                     /translation="MHFVSTRGQSPAVGLSAAIAAGLAPDGGLYVPELLPPARELQAG
                     ATLADTAADLLAPFFAGDALEAALPAICREAFDFPVPLRPLGAGDHVLELFHGPTAAF
                     KDIGARFLAGTLSRLQAGKGRDLTIVVATSGDTGAAVAAAFHRQPGVRVVVLYPDGRV
                     SPRQAHQLGCFGDNIQALRVAGAFDDCQAMVKQALADRELQVQVPLSSANSISLGRLL
                     PQMSYYAHAALTHHAETRRRLNLVVPTGNLGNAMAAVLARALGVPIGQIVLATNANAV
                     LPAYFNGGDYQPQSSVATVANAMDVGAPSNFERLRWLYHGDDAELRAAFRAFAVDDVT
                     IRATIAAAHASSGELFCPHTATAVKVLQDLRARGAKGDWAVVATAHPAKFEAVVEPLI
                     GASVAVPPALDALLQRPAQAEPLAADYAALREVLLR"
     gene            complement(1391..2305)
                     /locus_tag="QEL58_000094"
     CDS             complement(1391..2305)
                     /locus_tag="QEL58_000094"
                     /EC_number="2.7.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine kinase"
                     /protein_id="HDS1674623.1"
                     /translation="MIARAYAPASVANVAVGFDILGHAIAGVGDTVSVRRIDEPVVRI
                     EAIRGSTVELPLDAAGNTAGAALMSLRERLGLDFGFAVEIDKGIPFGSGMGGSAASSV
                     AALVAANALLDAPLPREALYPHALDGEAVASGGRHGDNVGPLLLGGLALCTADRLLPI
                     PVPASWHSLLVHPHAVLETRRARQALQGSYALGEFVAQSANLALVLSGCHRSDAGLVR
                     AGLRDVLVEPRRAGLIAGFEAARDAALSADAMGAGISGAGPSVFAWFEDADQARAAVA
                     PVQAAFAAAGFDSDAWVSPLDAPGARLC"
     gene            complement(2302..4806)
                     /gene="thrA"
                     /locus_tag="QEL58_000095"
     CDS             complement(2302..4806)
                     /gene="thrA"
                     /locus_tag="QEL58_000095"
                     /EC_number="1.1.1.3"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010482598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional aspartate kinase/homoserine
                     dehydrogenase I"
                     /protein_id="HDS1674624.1"
                     /translation="MSSHAPAHSVAPADLAAPSIVVHKFGGTSVADAERYRHVAGLLL
                     ARPESLQVTVVSAMKGVTDALIELAQLAAKGDEGWREAWHALRARHRGAAVALLGEQV
                     GETVEWIDTRFEQLAEVLAALAVIGELPREVLDRVQGLGEVFSAQLLGTHLRARGEDC
                     AVLDARDVLVVGHGELGVDVDWEASADRLAKWRLQHPQLRLVATGFVARDRHDRITTL
                     GRNGSDYSGAIFAALFNADELHIWTDVDGVLSADPRLVPEAVQLESLSYDEACELAYF
                     GAKVVHPQTMSPAIRLGLPIFIRNTFQPAHPGTRISAERSPRGPVKGLTLSPGLALLN
                     LEGTGLIGVPGTAERVFAALRQAQVSVVMISQGSSEHSICCVVRAAEAARGRDALLHV
                     FAHELSVGQVQRVQVSEGVSVLAAVGDGMAGQPGVAARLFEALGRAQVNILAIAQGSS
                     ERNISVAVVSADATRALRAAHAGFWLSPQTFAVGVIGPGNVGAALLDQLLAARPQLLA
                     KANVDLRLRALASRSRMRLEVDGLHADWRQALQEAGESSDLDRFTEHLLAAHLPHAVV
                     IDCSGSAEVAERYEGWLAAGIHVVTPNKQAGAGPLPRYQRIRAAAAASGARFRYEATV
                     GAGLPVITTLRDLVDTGDEVLAIEGIFSGTLAWLFNRFDGSQPFSALVAQARSMGYTE
                     PDPRDDLSGVDVARKLVILAREAGHALSLEQVQVESLVPALLRDGSVDAFMARLGESD
                     ASLLQRLQEARARGAVLRYVAKLGADGASVGLQELPADHAFANLRLTDNVVQFRTRRY
                     CDNPLVVQGPGAGPEVTAAGVFADLLRVAAGEGARL"
     gene            4834..5154
                     /locus_tag="QEL58_000096"
     CDS             4834..5154
                     /locus_tag="QEL58_000096"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674625.1"
                     /translation="MQVSSFPATCMVRGRGFRELHEDDGPHQGSGDGGGGNGGGGDRR
                     SRTARGGGGVQAGVGGIKDHGAQKTPRALPLSSAAMQKNAAAIIGQRADIWLHLRQSS
                     HQHA"
     gene            complement(5164..6114)
                     /locus_tag="QEL58_000097"
     CDS             complement(5164..6114)
                     /locus_tag="QEL58_000097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005413159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HDS1674626.1"
                     /translation="MRNNPMARGIANGVAAGALWGVVFLAPAVLQSFNALQLSAGRYL
                     VYGLIAVALLLPRWKRLAPQLGRAEWLGLLWLSLAGNLVYFLLLATAVQWAGGAAASL
                     IVGLIPVVVTLVGVREKGAVPLKQLLPALGLCVLGVALVGWEALMSEHLATPWRQRLI
                     GLLCAFGALFSWALYSIGNSRWLARRPDLSSHDWSLLTGVTTGGLALLLVPMAFIGHT
                     GSHTPAQWGGFWAISAGVAVVASILGNAFWNRASRLLPLTLTGQMIVFETLFALLYAF
                     AWQQRWPSLLEALAIVFLVAGVMLCAHAHRAPRAIAEHAG"
     gene            complement(6273..6971)
                     /locus_tag="QEL58_000098"
     CDS             complement(6273..6971)
                     /locus_tag="QEL58_000098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005413158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDS1674627.1"
                     /translation="MGAIFHLRHYGQATGLDRHDYAQWVLPLQGELQFEMEGRGGRLD
                     LLQGAFVAAGEAHDQMADGPNGFVIVDCAPGVLDDGTQEHLCRQRWLHLPLALRRCLA
                     DVQAGRPMPALLPQLLQAFAPAGSGARMQGLCAAVQADPGQAWPVARMAAFVGVSESR
                     LHALFQREFGLSPQAWLSASRLRWAKHQLRTSTAPISDIALSAGYSEQSALTRALRRE
                     CGQTPAAWRRSAGL"
     gene            7053..7835
                     /locus_tag="QEL58_000099"
     CDS             7053..7835
                     /locus_tag="QEL58_000099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674628.1"
                     /translation="MTHQHAYLLLAASLGLALAATASAQERTPPAPHCMDAVGVQEVE
                     QASPRSIALRSASGQAYRIDFNEDCPGVRGATTLKLEAPAGWACGRPSERVVVDGHSC
                     AVSAVTPVQNRDYASVARDSDRLRTATLPALTIRERKEVRRGFGGSPSYCFATRNVRG
                     WSSDTQGMLVETNPRRSGGHRFYRVELGSHCLQLDRSPELSFQSGMQNGLICGNPGDR
                     VVTADFASYDERSDELAPLPRFSRRGACTIQAVYPASSQASN"
     gene            complement(7832..8884)
                     /locus_tag="QEL58_000100"
     CDS             complement(7832..8884)
                     /locus_tag="QEL58_000100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="linear amide C-N hydrolase"
                     /protein_id="HDS1674629.1"
                     /translation="MARMKWKGRAMLAMALASAIAPALACTRAVYLGDNGDVITARSM
                     DWKVDVATNLYVLPRGIARTGQAGPKSLAWTARYGSVVATGYDVSTTDGMNEKGLVAN
                     LLWLVESEYPQQRGNKPGLAISLWAQYVLDNFATVDEAVAALKREPYSIVTDKVPGED
                     RQATLHLSLSDATGDSAIVEYIGGRQVIHHDRRYQVMTNSPIFDQQLALNTYWQQIGG
                     TVMLPGTNRSSDRFARASFYINAIPKAEDPVEALASVFSVIRNASVPYGITTPGEPNI
                     SSTRWRTVADHKRRLYFFESALTPNTFWVDLNKVDFGGPVLKLDLGKDQRNTFAGDAL
                     GHFVPSAPFTFLGVDG"
     gene            complement(8952..9365)
                     /locus_tag="QEL58_000101"
     CDS             complement(8952..9365)
                     /locus_tag="QEL58_000101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006362991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YeeE/YedE family protein"
                     /protein_id="HDS1674630.1"
                     /translation="MSRALWAAAVAGALFGAGLALSGMTDARRVLGFLDIRGAFDPTL
                     MWVLGSALLVSAIGQRWVLRRAQPWFALRFQLPTAHDVDARLLLGAALFGIGWGWAGY
                     CPGPAIAGLAVASREALWFVPAMVLGFWLHDRLVR"
     gene            complement(9362..9799)
                     /locus_tag="QEL58_000102"
     CDS             complement(9362..9799)
                     /locus_tag="QEL58_000102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008268704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YeeE/YedE family protein"
                     /protein_id="HDS1674631.1"
                     /translation="MNLPWSALAGGVLIGMAAVWLLAATGRVAGISGIAAGSLRAGRG
                     ERGWRWAFLMGLLAAAGLVLWWQSVPGSAPRVLLRDALPAWQLIGAGLLVGFGTRLGS
                     GCTSGHGVCGMARGSKRSLLAVLVFMACAMLTTFVVRHGGAPL"
     gene            9885..10205
                     /locus_tag="QEL58_000103"
     CDS             9885..10205
                     /locus_tag="QEL58_000103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006362987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HDS1674632.1"
                     /translation="MTHPPLDTATMAEHATQAAALLKSLAHPARLQVLCRLVEGEAPV
                     PELQALTGLSASALSQHLAVLRGMQIVATRREAQAIHYRMQEGPALGVLQALYTAYCG
                     GGVR"
     gene            complement(10209..10637)
                     /locus_tag="QEL58_000104"
     CDS             complement(10209..10637)
                     /locus_tag="QEL58_000104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008268182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BLUF domain-containing protein"
                     /protein_id="HDS1674633.1"
                     /translation="MPLRAIAYVSRALPELSVERLQALVEDAARFNKMAGVTGVLLHD
                     GDRFLQYIEGPPDGIDSVYERILQAGSHIDIIELARGRLGQRQFPYWSMRALPVEASL
                     LRQLSSSDWSGFSRTLEGDRSAPTPVDLLDAVVQPALHAG"
     gene            complement(10721..11854)
                     /locus_tag="QEL58_000105"
     CDS             complement(10721..11854)
                     /locus_tag="QEL58_000105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005413151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hybrid sensor histidine kinase/response
                     regulator"
                     /protein_id="HDS1674634.1"
                     /translation="MNLLPPDPAQSQTPVNLLIVDDVPQNLVAMQALLQREGVNLLLA
                     GSGAQALELLLEHEVALALLDVHMPEIDGFTLAELMRGSHRSRTVPIIFLTASPDDPV
                     RAFKGYETGAVDFLHKPVAPQVILSKVNVFIELYQQRQLLKARNEALERALKLNETMA
                     AVLTHDLRTPLSAILLCADKLALELPEDNAGAQQTLQHLEASTLRMARMVEQLLDFSR
                     IRSGGLRLETSACDLAEVTHAVIAEAGSAHGHERIRFDAIGDTRLQGDMDRLGQIAAN
                     LIGNALTHGCEALVQLDGRDVRTVVMRVSNTGHIDDALLPRLFEPFKASFHQSKGLGL
                     GLYIVDQFVRAHGGHIGARNEAGQVVFEARLPRRWDGTGVVAS"
     gene            complement(11851..12426)
                     /locus_tag="QEL58_000106"
     CDS             complement(11851..12426)
                     /locus_tag="QEL58_000106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010482610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheB"
                     /protein_id="HDS1674635.1"
                     /translation="MVVQARPAVVVVGASAGGVAALQAVLGALPPRLPAPVLAVLHLP
                     RDRSSRIAEVLAPYCALPVREAEDKQPLQPGTVTFAPPDYHLLVEDSEAVALSVDAPV
                     LFSRPAIDPLFESAAAVFGAQVLALLLTGASSDGSEGVAAVRAAGGRAWLQCPEEAEA
                     SMMPASALQHAGADAVLPLELMCRRLKELFA"
     gene            complement(12426..13250)
                     /locus_tag="QEL58_000107"
     CDS             complement(12426..13250)
                     /locus_tag="QEL58_000107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005416310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-glutamate O-methyltransferase CheR"
                     /protein_id="HDS1674636.1"
                     /translation="MNEQALFDLELKILLEALYRRYHYDFRSYAVSSLRRRMRQAMQR
                     YECDRLVDLQHRLLHEPELFAQAMQFFTVQVSEMFRDPAYFRELREQVVPVLRTYPSV
                     KLWVAGCSTGEEVWSLAILLHEEGLLERSIVYATDINPAALATAEAGAYGIDRMAQFS
                     RNYLAAGGTASLSDYYATAYDGAVFDRQLRRNVVFADHSLATDTVFSEVHLVSCRNVL
                     IYFNRDLQDRAVGLFREALVHRGFLGLGSKESLQFGHHHDAFDVCSREHRLYRKVA"
     gene            complement(13247..16360)
                     /locus_tag="QEL58_000108"
     CDS             complement(13247..16360)
                     /locus_tag="QEL58_000108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010482613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HDS1674637.1"
                     /translation="MRPGATTRDRWIWMTSAVLLAATIALELVVPLGYAVWLAYFLAV
                     GVTVFQRSVRAPFIVAAIACVLLVIGFNVAPASNNSSFSFVNRSIGGCAFLMIALIVS
                     RAIEARRQAMRALWLQEAENAVAMSLRGDLGPEQIAEAAATQLGSQLQADIGAVYRIE
                     GGRLQLTGGMALPSGMPASLALQEGVAGQVARDERIRHLHGGDAAVLELQTSLGRLPV
                     SERILAPISNDGAVVGVIELGRAQAGGQRDLDRELLERCGETIGMALRASLLRAQLVV
                     LLEESQRQGEELQAQQEELRVANEELEEQSRSLLQSQSHLEEQQAELEQSNVQLEERT
                     HELEAQKQALLVAQGQLVRNSNELAATSRYKSEFLANMSHELRTPLNSSLILAKLLAD
                     NKDGTLTDEQVKYARAILSSNNDLLALINDILDLSRIEAGHVELADEVVVVDSVVQRL
                     RETFEPMARQKGLALQIEADALAPSQLVADSQRLQQILKNLLANALKFTEHGKVSLHV
                     RAAGSGRIRFEVADTGIGIAREQLQVIFEAFRQADGSTRRRYGGTGLGLSISRDLAER
                     MGGSIHVDSEPGRGSCFILELPLQGAPVAASGEALAPVSNAASPQPVAAVAARTVAAP
                     AVAPAAAPAIANVADDRGRRQRAGRLILAVEDDATFAEALVVLAHELDFDCVVATTAE
                     EALSLAAELRPNGILLDIGLPDVSGLSVLERLKRNPDTRHIPVHVVSAMDRGQVAREL
                     GAIGFAIKPTTRERLVAAIEQLEQTSQRDVRRLLIVEDDSELRHNLELLLGREQLQII
                     AVGTLAGALEQLSTVTFDCMVMDLSLPDGSGYDLLEHMAGNDDVGFPPVIVYTGRALN
                     REEEQRLRRYSKSIIIKGARSPERLLDEVTLFLHSVEASLPSDQQRLLREARRRDTVL
                     DGRTVLLAEDDVRNIFALSSVLEPLGVTLEIARNGQEAVDRLAEREVDLVLMDIMMPE
                     KDGLAAMREIRAQRHLQDLPIIALTAKAMPDDRERCLQAGANDYIAKPIDVDKLVSLC
                     RVWCSRQ"
     gene            16512..17675
                     /locus_tag="QEL58_000109"
     CDS             16512..17675
                     /locus_tag="QEL58_000109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HDS1674638.1"
                     /translation="MDAAASTTSVLTDPSRQLRLLIDSVRDHALYLLDPEGIVCSWNP
                     GAERIKGYSANEVVGTHFGRFYLPAERDAGEPQRLLRLAAQHGHVASEGWRVRHDGSS
                     FRASVVIEPVVEGGELLGFVKITRDITEQWQAQRLLRDAQRALRNTQQFETVGRLSRG
                     LSHEFNNLLTTIGNALDLLSLRVSGDDVRAAELLDAAQAATDRGALLTRQLLAFSTGQ
                     TLIREPLDMNALVRQWLPDLQRACPPTVTLDARLTPGLPPVSTDALQLQTALANLVAN
                     AVEATVDGGRILIGTALEHRLDPDADTTLQRGYVTLSVCDEGHGMAADIAERATEPFF
                     TTKDIGKGSGLGLSQVFGFTTQSGGFVDVSTTPGVGTTVSLLLPATEEAPDDR"
     gene            17665..18024
                     /locus_tag="QEL58_000110"
     CDS             17665..18024
                     /locus_tag="QEL58_000110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006362973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HDS1674639.1"
                     /translation="MTDDPIRVLMVEDQTDLREMIGLALRDFGIEVATTADGHEAAEL
                     LKGEARFDVVFSDVSMPNGMSGIELSEHVAREQPQARMILSSGYARSQLPPLPEKVEF
                     LPKPYRLRQLVQLLKQG"
     gene            complement(18091..21780)
                     /locus_tag="QEL58_000111"
     CDS             complement(18091..21780)
                     /locus_tag="QEL58_000111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014036984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674640.1"
                     /translation="MSAHHSAARRAARLPRAALYQALLLGLAATAQAAPPAAEPAPIR
                     CDGTQCNAEGELLFSLRSRSYDEPVTEGTSTRSSSQALQPDRRVSVAIDEPGKATVRG
                     EFMIRLPEGGAIWATEDPAMGQPELSVSAPGMVAFDEGRIVRPVEFYVRGNYTAFIQR
                     LEVSVYRGSDSDRVAPLATFELPVAAVAQGTWDGTLPASTPLRRGDRLVYVLRAFDAE
                     GNVDETTAQSMQLVTPAEFERGNQQLRDALEDRRGTAVDANQAASLSLLQQVFDSNGL
                     RQQNIPVYGSRVRLRGRDLPLGASLKINGDSYPLDQDRKFAAEYLMPIGHHAFDVRVE
                     RPDAPAIARTLQVDVSGQYLFGVGLADITVYQNKASGAGQDLARGERNDDVLSDGRLA
                     FYLKAKTRGRYLLTAQADTQNRPLDELFTGFTTADPRDLFRSLDPDLYYPTYGDDSLT
                     QRDVDSMGRFYLRMDWDKNQALWGNYNTGLTGTEYAQYVRSLYGAALSWRSRGANAWG
                     DARSELRLFGSQAETAPGHSEFIGTGGSLYYLRHASILSGSDQVVLEIRDRTTGRVEQ
                     RVPMVRGADYEIDALQGRILLTRPLAQVSRENLRRISRDVPLDGYEQRLIVDYEWVPT
                     GFDSDDITAGVRGKHWFGDHVAVGATYVDEQRAGQDYSLKGADLTLQAGRGTYLKVEH
                     SRSEATSAPVFFSDNGGLSFSRLNPEGPREGEATAVEARVNLRELGWTQRDWSAGAWW
                     RQVDGGYSVGRFDTGQRVREQGAELLGYVTDDFSLYARYSEARRGAQSLIQAQATAEW
                     RIGENDRLSAELRRVQEDRGSGSNVAGVLAAARYTHRIGTSLDVYGGGQLTVDDDHGR
                     YADNDAVVAGGTWTFANLSTVGAEVSDGDRGTAAQVNAEYRLTPQHSFYGAFTQSTDR
                     SEYDPLFSPNAQDGWTLGQRWRLSDQVNVFNESQFLKSGQESGLAHTFGMDFYPAVGW
                     NAGFTLSNGKLDASTGQVDRKAVSLSGGRTSPGTEWQSKLEWRRDTGAERRTQWVSTN
                     RLSHRLNDSWRIAARFNYADTDDAINPVAGARFIEGNLGFAYRPWDNDRWALFGRYSY
                     LYDLSTMGQVNGVDYDQRTQVLSLEGVYRIDQRWEVAAKAARREGEVRYGRGTGPWFD
                     SATNFASGQLRYDLYYQWHGLLEYRLLDVRDGGSRQGWLAGVDRDVGRNFRVGVGYNF
                     TDFSDDLTRFDYTHRGWYLNLVGRY"
     gene            complement(21777..27824)
                     /locus_tag="QEL58_000112"
     CDS             complement(21777..27824)
                     /locus_tag="QEL58_000112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008267461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF11 domain-containing protein"
                     /protein_id="HDS1674641.1"
                     /translation="MPSLAWAAAYATGGSSPYRNTVLWLTWGGGANGVNNVALNDGAM
                     SSIDMPVAAGVNLRVDCRLNTAETNVLRSYRPGNFGGDSLDDLYNIGGTGTSNQLIAG
                     IARASGTSTFSITCTSTLGGAPYRLRGVVMADAESINNSGEFVEASAQGTWNVVEVRK
                     NLSNATPYLVNKSTSGANQVIRFGPGNDDNTAAVTFLSFDNAAHAPGNLAVNMGFSMR
                     GGGTTAIAIGLLVPYADFGDAPQSYGDAMHVVDDLQFRSDGIPQGASNFNINTAGYTP
                     GGLAPPLTDFLGSLGPDTEQRSSYSLDALGDDNFPQVGSREEDAWPTSYRLTVMQAGT
                     QINQPVACVGNGSVAGWIDFNRNGVFDANERSGIAACSGGQANLTWTVPAQVLAGTSY
                     VRLRYSTNAVQIQNPTGVADDGEVEDHRITITAPSLKVVKSNNATGGIWNYGQAGTEY
                     TLTVSNTSDVPTGNPPNVAAGTITVRDQLPAGIAPNWSGTHVSGNWSCTASGQDVTCT
                     STQVLAAAGSAGSSSVFTLPVTVTAAATGVLTNHASVGGGYDPFNSGNAPAPGASCTD
                     ADHCTRSDVTVPVTRVGYAKRSNTAGPVAVGTTVSYTVDVTVADGNTRDLLTLTDTLG
                     TGLDFASVSNAGAFTCNAANPLVCTLPAGTVPGTYSLSYTATVNAQASGQVVNTVVGT
                     GTDNPTCSSNCTTTTPVAAPRISVSKASSTAGPVAIGDAVAYTVTVVVADARTRAVTT
                     LTDTLGTGLDFGGITNAGAFSCAPGNPLVCTLPAGTVPGSYAFSYTGIVNAQASGQVR
                     NAVVPSGTDNPSCVGSCDTTTPMASALVVYAKQASTGGPVRIGDVIDYTLSATVTRAR
                     TTGVVTLTDTLGSGLDFGGVSSAGIFTCNGTQPLVCTLPAGTVPGTYSLTYRATVNAQ
                     ASVSVRNAVLGSGTDNPSCSANCDTTTPVAAPGVSYAKSVSGTGPVSVGDRLTYTLTT
                     VVTNSRTTDVVTLTDTLGTGLDFGAVTSAGAYSCNAANPLVCTLPAGTVPGSYSLSYT
                     AVVNAQASGQVTNAVLGSGGDNPSCTANCDTSTPVTGSQIDYRKTSAAAGPVKVGDSI
                     AYTLTAVVSHSRTTAVFTLTDTMGPGLDFGAVTASQGFSCNAANPLVCTLPAGTAPGT
                     YTVDYTAKVNAQAKGSVSNAVLGGGPGTTTCTSNCSTTTPVLAAVVTYRKQSSTVAPV
                     GVGDAVDYSVEVTVANSQTIDTLVLTDTLGVGLDLQSVTQPGPFTCNASNPLVCSLPA
                     GTAPGTYTLGYRALVNAQASGSVRNAVLGSGGDTPTCSGDCSTEHALAEPRVVLEKQA
                     GPASGTEVRPGDRLRYTLVATVERASLRKPLQLVDTPDAGLSIESLPAGCVQQATDIV
                     CTLPAGTAVGRHEWVYQAIVNQEARTEVLNRLRGQYPDGSPPPECTTCETRHKVVSDF
                     ALRITKTASPRRVKVGDLVRYQLVVENVGSSHWRDGVVVDTPPPGFSYVDGSMRVADD
                     DGAFSLASSQSPLRIGAVDIAVGRSATITYLLRVGAGVRSGNHVNQAVATADDGSPLS
                     NIATAEVAMDADPLLEDSLVFGTVFDDRDGDGWQDSAELTGVRVQGGFAPSAYVAGST
                     TLDRGDGPQPLADASAPLLHGVQIGTVHGRASTSDGAEAHQVVVRQRLRELAFTDDFV
                     LESAQGHRLRMDAQGDTDVQRSGEAGKGLTAAEPTVRREIARVSEGYEVAYVIGNEGI
                     QEQGIPGVRLATVEGLLVETDPFGRYHLADVHGGDARLGRNFIIKLDRATVPAGAELT
                     TENPLLRRVTQGVPTRFSFGVRLPPSPQAPAERMELALGEVLFAPGSSELRADYRPVL
                     VKMAEVVNRYQGGDVVIAANGESQALAFARAAVVRDALQAEVAESARAGLTVQLRTDV
                     QDPHSLLAGVDANGALLGNVLFDTDKATVREEFKPLLAAIAARLEKMGGGQVSLVGHT
                     DVRGSHAYNQALGLRRASAVFEALRSQLSPAVQQRLRVRNEESAATRAAARQQEARR"
     gene            complement(28290..28853)
                     /locus_tag="QEL58_000113"
     CDS             complement(28290..28853)
                     /locus_tag="QEL58_000113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008268455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HDS1674642.1"
                     /translation="MRPAARSRRDLHHALAATLVSHPRCTLSELASGAGISRATLYRF
                     APTREAINEALFAAGFERLEAAATWFDADADAMQVLERVTEVLLADWELVTLLFARMM
                     EEQQRQGDLHLLPGRWAPIGERFEAFFLRGQKAGVFNLGFTAVWLGDFYWTCFYGITW
                     SLARGRLAPAMAASTLLASFLQGAKQP"
     gene            29022..29852
                     /locus_tag="QEL58_000114"
     CDS             29022..29852
                     /locus_tag="QEL58_000114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HDS1674643.1"
                     /translation="MLHPLRDIAVLFDASDTGHRVLNIAARLAQVQQSHLIAVSTAQH
                     PTDIASGFARGAGIAAALDHEARADAACTAQLMQNLRAAAEPLRISTELRIVSDYLGG
                     ADLSLHSLYCDLIVAGYPHTPGAPSGWHPLGTLRQTGVPMLLVPPHWRGEQVGQRIVV
                     AWNASKQARRAVADALPLLARAQAVHLLMVDTPKAEAAPGAEMAQHLARHGVEVEIQA
                     VNSTQGGVAATIRQHVLDAEADLLVLGPYSRSRVVERVLGGVTENLLAEVPAPLFVSH
                     "
     gene            complement(29800..30693)
                     /locus_tag="QEL58_000115"
     CDS             complement(29800..30693)
                     /locus_tag="QEL58_000115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019338485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HDS1674644.1"
                     /translation="MDRIPQLLDQDESTRLEVSTLAEGQGVPLSFGHACLAVLVCVSG
                     RARFALDFREVAVQRHDVLVLAEDTLALLRQRSRGFLAVVCLMPKALASEVGYVLPNA
                     LFKFLHQQPHCTPSPLEVPLLQGWLQQLMDAQHTGGRYRHVMLRTLLQTFFLKFATLL
                     PAKGAPTAQISRRERLAWNFWELVGQRSTRQRDVQSYAEALCITPFYLSQLTRECFGQ
                     SPKALIDRQAVLEIKAWLSYSELPIGRIAERLCFEDASYLCRYFRRHTGQSLTAYRRA
                     GQGLASGIRTAVPELRPAGSR"
     gene            complement(30791..31255)
                     /locus_tag="QEL58_000116"
     CDS             complement(30791..31255)
                     /locus_tag="QEL58_000116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010482623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDS1674645.1"
                     /translation="MPMQLQPVQPSHYARIARWLDSAAATQRWAGPGVAFPVPAGAFA
                     QVLGLGTRPGRVLLDGQGDCVGFGQYWLSEPGTAHLGRIIVSPQARGRGLGRVLMQLM
                     IAEALQSPGVQRLTLRVYRDNPAAVALYRDLGFRPVDDASTPDLLFMQRGGG"
     gene            31419..32309
                     /locus_tag="QEL58_000117"
     CDS             31419..32309
                     /locus_tag="QEL58_000117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006362961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrodipicolinate synthase family protein"
                     /protein_id="HDS1674646.1"
                     /translation="MLRGLSAFPLTPLSGDDIDTRAFAALVERLAASGVDSMGILGST
                     GSYAYLEKAERKRVLREALAHAGGVPVIVGVGALRSRDVLELARDAEDAGAAGLLLAP
                     VSYQPLKEHEVYTLFESVSMAVHTPICVYDNPGTTRFQFSDELHGRIAALPNIGSIKI
                     PRLSDNPVEAAARVAMLRAHLPAHVTLGISGDAAAVRGLAAGCDAWYSVVAGLFPEVA
                     LRITQAARSGDMPTAEAASARLAPLWALYDRFGGIRVMACAAALMGLCSDDCLPRPLL
                     GLQGNDRAQVAEVLEGLRLR"
     gene            32527..33555
                     /locus_tag="QEL58_000118"
     CDS             32527..33555
                     /locus_tag="QEL58_000118"
                     /inference="COORDINATES: protein motif:HMM:NF013884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HDS1674647.1"
                     /translation="MRYNPALDGLRAVAVMMVLAFHARLFGGFGGFFGVDVFFVLSGY
                     LITRILAEQHAATGSLRIGTFYVRRLRRLYPALLLLLAVYLAAAPWVFPEHANHLRDA
                     AVAGLYLSDYGFALWRVPWYLQHTWSLSVEEHFYLVWPMVLMVVFRLPRHWWAPAVFL
                     LAIAATLWRWHVALNDDAWYQPYYRFDTRLSGILLGAAAGLWNPSLPKAAAPMGALLL
                     GIAVTQAHVKEMAALTSWMAMAEIGAALLVLGAHHVRALCWTPLAWVGKLSYGIYLWH
                     FPIMYWLRGQEISGWSSMLIGSGAAVLCAAASYYTIERISRSGRAHTAETARVDQAGT
                     LGRDAGIR"
     gene            33958..34458
                     /locus_tag="QEL58_000119"
     CDS             33958..34458
                     /locus_tag="QEL58_000119"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674648.1"
                     /translation="MELSGFLLILGMAAEPGNPAAPKAPASEEVTAAIAEATEAADTF
                     ADCAGWWDFMSTWEMKAGRSASAEQFRNMGNGAQAAALWLHAQAYALTATKPARYSAW
                     LPMVAPRRSAAATRAAAMAEHGDIDFARAEGERCRAMLGAQQHAIDDIRRDAVQRELD
                     ASMPTK"
     gene            complement(34473..35105)
                     /locus_tag="QEL58_000120"
     CDS             complement(34473..35105)
                     /locus_tag="QEL58_000120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674649.1"
                     /translation="MSPKGKGGGSASQHSTVATLYDETFTHKNTVSGADELIDAAALF
                     KGLNLNYGNAKGAEVSSQCKSHAEMKLLACWWTGLKSSKTFGSSVGIELNEFPCSHCH
                     TVLKVLTIKAEKESGPRFNLICVRMPAGTSTAYMGDHAGDAGAMNINPPVTIRYQSGH
                     HPLSKWSSDLPPSSGAASLVLGKAALQRTWRGTLGRCKVVSPLTRGRSCL"
     gene            35703..36068
                     /locus_tag="QEL58_000121"
     CDS             35703..36068
                     /locus_tag="QEL58_000121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019336886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674650.1"
                     /translation="MERWYLATLVALILHQIDAAFWHEWDMFRVPGGIQGFLVFNLVA
                     VGALLHGYRQVALAKPSARAYARLCGIVGAGTAAIHFAFAAAGREEFHLPLSIAALAA
                     CLIAGVGLLLSSQKPATGQ"
     gene            36746..37654
                     /locus_tag="QEL58_000122"
     CDS             36746..37654
                     /locus_tag="QEL58_000122"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="sel1 repeat family protein"
                     /protein_id="HDS1674651.1"
                     /translation="MPNPSLKYSFVYQCLRLSKFALIACMVTSCSDKNDDVQQVSGTP
                     KNEAPAATAELRGISPKPTAIDTNLQSAQRLPDAPVKDLYPALRNRAEAGDLEAKRQL
                     FLLLNECRVAMQSDRQLDYSDSQVSPEILKASGKTREQYLADQKMSTLAFTEEKLKQC
                     EGIPGDALKETSRWLKEAAQGGDSYARLAYYNYMDIIVGDQQEQAASAEKVKQFNDDS
                     YRYIKSVADTGNPDGLFTLGTAYQRGIITPKDPILAYAYKKAAGELTPIGGNEQMLDL
                     MAQSMTPTDLRKANQLAATLAQRSKR"
     gene            complement(38371..38532)
                     /locus_tag="QEL58_000123"
     CDS             complement(38371..38532)
                     /locus_tag="QEL58_000123"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674652.1"
                     /translation="MKVNTDTMAHPSVAYTSTGRINGIGFDGARLTVGTLTATNMIQV
                     SADMGQAAA"
     gene            complement(38636..38863)
                     /locus_tag="QEL58_000124"
     CDS             complement(38636..38863)
                     /locus_tag="QEL58_000124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005418668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674653.1"
                     /translation="MARVDKGTTKIGFINRNKQENIRATGLPGTDHGQSIYVLHCKPC
                     GETYGANGSDIHLRKCPACQGGRPGLDFEAP"
     gene            38926..39195
                     /locus_tag="QEL58_000125"
                     /pseudo
     CDS             38926..39195
                     /locus_tag="QEL58_000125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409370.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
     gene            complement(39289..39365)
                     /locus_tag="QEL58_000126"
     tRNA            complement(39289..39365)
                     /locus_tag="QEL58_000126"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(39329..39331),aa:Arg,seq:cct)
     gene            39550..41082
                     /locus_tag="QEL58_000127"
     CDS             39550..41082
                     /locus_tag="QEL58_000127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014507550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HDS1674654.1"
                     /translation="MSSELLKSLGLDAINAGTYLGNGEWSSATSGELITPVNPTTGEP
                     IAQVRATTEAEYDTVVARAQEAFKVWRTTPAPRRGEAVRLCGEALRKHKDALGSLVAL
                     EMGKSKREGDGEVQEMIDIADFAVGQSRMLYGYTMHSERPGHRMYEQYHPLGLVGIIS
                     AFNFPVAVWSWNSFLAAICGDVCIWKPSNKTPLTAIASLKICNDALREAGFPDIFFLI
                     NDAGTALSEKMVDDRRVPLISFTGSTQVGRTVNEKVARRLGRCLLELGGNNAIILDET
                     ADLKLAVPGIVFGAVGTAGQRCTTTRRLIVHRSIYADVLATLVKAYKQVEGKIGDPTD
                     AANLMGPLNSDGAVQQFLDAIAQAKAAGGTIETGGTRIDRAGNFVLPAIVSGLKNSDA
                     VVQHETFAPILYVMPYDSLDEAIDMQNGVPQGLSSSIFTTNLKTAEKFLSAAGSDCGI
                     ANINIGTSGAEIGGAFGGEKDTGGGRESGSDAWKVYMRRQTNTINYSDSLPLAQGIKF
                     DL"
     gene            41082..41885
                     /locus_tag="QEL58_000128"
     CDS             41082..41885
                     /locus_tag="QEL58_000128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HDS1674655.1"
                     /translation="MDNAAPTAPDRIPSGAPILDYSGRRVLIAGGSKGIGREMALAFA
                     GAGAQVSVCARGQSGLDVLRADATAQGVVLHAFAADLADTGQIQGWLQAAADALGGID
                     VLVNNATGYGMADDEDGWAASLQVDLMAAVRASRLALPWLRISEDACILNLSSIAAQQ
                     PRPGGAPYAAAKAALSHYTTSQALALAKDRIRVNAIAPGSIEFDDGLWDRRRSEDPAL
                     YHGTLAKIPFGRFGHPREIADAALFLCSPLARWVTGSVLNVDGGQVLMG"
     gene            42093..42377
                     /locus_tag="QEL58_000129"
     CDS             42093..42377
                     /locus_tag="QEL58_000129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005416299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4190 domain-containing protein"
                     /protein_id="HDS1674656.1"
                     /translation="MSVAPRQTSALAVVSLVMGIASWTVLPFVASIVAIVTGHMARAE
                     IRRRPLELEGDGLAVTGLVLGWVMVGAVIAAILVFILFFGGLAWLAAVSN"
     gene            42383..43153
                     /locus_tag="QEL58_000130"
     CDS             42383..43153
                     /locus_tag="QEL58_000130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HDS1674657.1"
                     /translation="MTASDSTERFSSRVADYVRYRPDYPPALLQWLHDPMGVSHQAQV
                     ADIGAGTGISSRLFLATGHPVVAVEPNAAMRGAAEAWLAPQYPQFRAVDGRAEATGLD
                     AASIDLVSVAQAFHWFDTVAVRAEWQRILRPGGQALIYWNSRLLDASPFLVGYEQLLL
                     DYGTDYSAVAERYQDDATMQAWFGSGLRGMVQLPNVQYLDLDALRGRLLSSSYAPQPG
                     HPRHAPMIDALQDLFAAHAVDGQVAFEYQTRAFLGTLD"
     gene            43162..44217
                     /locus_tag="QEL58_000131"
     CDS             43162..44217
                     /locus_tag="QEL58_000131"
                     /EC_number="1.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014090028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinone-dependent dihydroorotate dehydrogenase"
                     /protein_id="HDS1674658.1"
                     /translation="MYSLARPFLFSLDAERAHGLGLSALDLAYRTGTTPLLAARIAPM
                     PSTVFGLTFPNPVGLAAGLDKNGEHIDALFALGFGFVEIGTITPRPQAGNPQPRLFRL
                     PEHNAIINRMGFNNAGVDALVRNVERARNRRGLLGINIGKNKDTPNEQAVDDYIACLD
                     KVYPLADYITVNISSPNTAGLRELQEETALRQLVSQLRDRQEALAARHGRRVPMLVKV
                     APDLSERDIDAAARVLGELKVDGVIATNTTVDHSKVAGDPLANEAGGLSGAPVLEQST
                     LVLRRLRARLPESVPLVGVGGILSGADAVAKMAAGAALVQCYSGLIFRGPALVSECVE
                     AIRRRREAPSRGAVAPL"
     gene            44226..45287
                     /gene="murB"
                     /locus_tag="QEL58_000132"
     CDS             44226..45287
                     /gene="murB"
                     /locus_tag="QEL58_000132"
                     /EC_number="1.3.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate dehydrogenase"
                     /protein_id="HDS1674659.1"
                     /translation="MDTTDGAAPLRWTLTRNAPLQALNTFHVQASAAQLLELHDPTLL
                     PDVLALPEVTNGPLLVLGSGSNVLIAEDLPGTVLVFGNRDISFLEHRADHAVIRAGAG
                     VPWHGLVMWSLQEGLSGLENLALIPGTAGAAPIQNIGAYGAQVGEFIQAVEAWDCHEQ
                     AWVRLDNEQCGFAYRDSVFKQQMDRYLITAIELKLPLLHDLRMDYAGIREELQAQGVE
                     LPGAVDVANAVIAIRRRKLPDPDVLGNAGSFFKNPVLPLEQVDVLLQHFPDLPVFPSD
                     QEGKRKVSAAWMIESCGWKGFREGDAGVAPSHALVLVNHGNATGAELLALARRISASV
                     LEKFGVPIEPEPRLLGAQW"
     gene            45320..46207
                     /locus_tag="QEL58_000133"
     CDS             45320..46207
                     /locus_tag="QEL58_000133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014646917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HDS1674660.1"
                     /translation="MRAALLMLGSTMAFGLMAVAIRYATRYVPTQEVAFFRNAFGLLA
                     LLPMLLRPGHAPLKTQQLPRYFLRSAIGLGSMLCAFWALGHLPLAQAVSLSYSTPLFV
                     TIAAVLWLGETVRVRRWAAVVVGFIGVLVIVRPGTAGFTAGSLVAVAAALLSSLVAIQ
                     IKQLTRVDSADTVVLYTYVFWVPLSLVPALFVWVWPTGTAWLWLLATGVLGTIGQLLW
                     TRALRLGEVSALTPISFLQLPLVTLFGWLLFNESVDRWTITGAGIILAANAYIAHREA
                     VLSRRAASAAASAAAKPAE"
     gene            complement(46284..47288)
                     /locus_tag="QEL58_000134"
     CDS             complement(46284..47288)
                     /locus_tag="QEL58_000134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008268462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoglycoside phosphotransferase family
                     protein"
                     /protein_id="HDS1674661.1"
                     /translation="MSFASAQHLGEVLQQSYGITATAVVPRPVGADASASVYRVDARR
                     GQWWLKCRTYQVDPAVWDSLHWLRGTLGIDEIVAPWPALTGGASVQRWGLQFTLFPYI
                     EGQSGFEAALSRTQWKRLGDVLRRLHAAQLPAELQQALPIVRLETAALETVGQWLVGE
                     GLAVAQDGLGRAFASVWDQQHARIAALHASALELHAALKDAPVDLHLCHTDLHAGNLL
                     MGNDGGLHLIDWDGLSLAPRERDLMFIGGAVGGRWGRENPLDFAAGYGNDLGDPRWIA
                     WYRHWRILQDLIEFQQVLLGSDGEERSPQLRRQSLHYLGEQFAPGNVFDAAERAYRAL
                     "
     gene            complement(47387..48421)
                     /locus_tag="QEL58_000135"
     CDS             complement(47387..48421)
                     /locus_tag="QEL58_000135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1624 domain-containing protein"
                     /protein_id="HDS1674662.1"
                     /translation="MSADDRRLHGLDLARYLALAGMVLVNFRLAMAVPAEGTGGLAGF
                     FHLLEGKASATFVTLAGLGLVLATQRQAWWPASVQTWRRALFLLVLGLLNLTLFPADI
                     LHYYAVYFALAVLWLRASPRVSLASIVGLAAGSFWALLQWDYSEGWNWQTLEYAGLWQ
                     WPGMARNLLFNGFHPLLPWLCFFLLGMLLARLPLSQPRVQRALLVLGLSLIAAGHGVQ
                     QLAQGTPWQPWLGTQPMPPGPAYVLTGAGAACSVIAACLWLARLRPGEWLAPFTAAGR
                     MTLTLYVGHILLGMGTLESLGLLDGRASLASVLLWALLFLLLATGAAWLWSWQLARGP
                     LEALMRRIAG"
     gene            complement(48418..49008)
                     /locus_tag="QEL58_000136"
     CDS             complement(48418..49008)
                     /locus_tag="QEL58_000136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HDS1674663.1"
                     /translation="MSRFDRNEQRVALILQAALQCFLAKGFHQTSMRDIAQVAGVSLG
                     NLYNHFPGKEAIILAVAVAESEELAPMLQRLAAADGERAQVMAFLLDLHALCRQPQWA
                     TLAVEVLAESARTPAVAEAFAANRRQLQQALADALQRVAQRERRRPALAPPLQAQVLL
                     DAIESDALRRGLGEADETDGEPLDIGLLALLLGARA"
     gene            complement(49091..49894)
                     /locus_tag="QEL58_000137"
     CDS             complement(49091..49894)
                     /locus_tag="QEL58_000137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005416290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="APH(3')-II family aminoglycoside
                     O-phosphotransferase"
                     /protein_id="HDS1674664.1"
                     /translation="MDETGSTPAEMPLPQAWQQDLAGARFERQSIGVSRADVARVHRP
                     GQADAFLKSEVIDAFSELGDEIARLRWLQAQGQPAPTVMATAEEAGRRWLLMSALPGR
                     DLATSADLPPQQVVAVLADALRGLHALPVATCPFDQRLASRLHAAQARVEAGVVDADD
                     FDNERLGQSAQQVFVELCASRPAYEDRVVCHGDACLPNLMVADDRFSGFIDCGRMGVA
                     DRYQDLALAARSLVHNFGDTRWVAPLFQRYGVIADERRLAFYRLLDEFF"
     gene            50079..50795
                     /locus_tag="QEL58_000138"
     CDS             50079..50795
                     /locus_tag="QEL58_000138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HDS1674665.1"
                     /translation="MKLMVIGASRGLGRAFVEGLCGPGDTVVGVSRGRPRDLACPEGV
                     ELQWIEADLSRPTAAADHIAAQAPADIDVLIHNLGIWEDKAFSDEYAFLDESDAALAQ
                     LVDVNITATLMLLQRLLPRVLNAARPQLVLTGSTSALPRSGRPEVAFGASKFALNGIA
                     DALREGFRERRLAVTSLQLGYLNTDDALSVPVADAAARGEGGLVPVHDVVTMVRALLQ
                     LSPSGFVRELVLPAIADPRY"
     gene            50892..52838
                     /locus_tag="QEL58_000139"
     CDS             50892..52838
                     /locus_tag="QEL58_000139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006362646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HDS1674666.1"
                     /translation="MDALSRVTAQVLDSALPSLPLYLLQATAVIGMIGVLLIATRRAG
                     HAIEGRRLYVGVALGLIYLFNSWFVARYTQGVVKLHLGFDILLVSGLLGGWRGGLACL
                     AASLLARYQFSGTQFFLPAALESLLQMLAGIWLRRRLHPRMLNELSLPMILQAWGVRI
                     GVTALGLALGVAIIGADQLPVTELAIQRLLALPVSLLMLGAVFALVYNDAQIDAQRQR
                     EQAWLRIDPISGLPNMRALGERLQHYWRDNDGIGHACLIVAEMGNLRDLRLRYGPLQD
                     NGLWRRDSGDDVHRLLPSLPADRLEIYQFGDAALAILVQGLSLPELRTQPRITELASG
                     LAERISEEWPGFRPLVRCAVVELKPPGDADDGHLPFRAITLALSAIESGVVFFDDPVQ
                     RDSEIDVLIESALERWLRHGDAPLCYQPKHRLQDRRLVGAEALLRMRDGEGRMITPMR
                     VISLLRRQGRLADLEWATLQSAIHFLQQCRGDGLQLTVAVNVSAESLRLPGFGLRLQE
                     LLQLHDVPGTMLRLEIVEWTEIVERDVVDANIAQLLAAGVTLSLDDFGAGYSTLILLS
                     QLAIAEVKIEQALIATLSDAKSQSIVRFIVEVAHRCGAIVVAEGTETLAQEQQLRALG
                     VDVGQGYLYSAALPADEFRRFAAS"
     gene            complement(52835..53446)
                     /locus_tag="QEL58_000140"
     CDS             complement(52835..53446)
                     /locus_tag="QEL58_000140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005413131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HDS1674667.1"
                     /translation="MPRAPQRLTDRKRDAIVRAAVEEFRASGYEATSMDRIAEAAGVS
                     KRTVYNHFPSKEALFSMILEELWERSVASDTLPYRADQPLPAQLLQLVGQKLELLSDA
                     NFIDLARVAMAEIIHSPERAQAIVCRMGEKESGESAWIRAAIADGRLRAVDPEFAGHQ
                     LHGLVKSFAFWPQVTMGQAPLNAEERARVAESAVAMFLGYYAI"
     gene            53551..54627
                     /locus_tag="QEL58_000141"
     CDS             53551..54627
                     /locus_tag="QEL58_000141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HDS1674668.1"
                     /translation="MKRLLLVLLLGILAVTAYTFCKSWSLPDFPDSPQYRDGKFRNAL
                     PRPAMGLRDGAEIWWTFLFNKPKGTVPAHPIPVLPLDRARLDAAPDRSLFRLGHSTIL
                     LKLRGQYWLTDPVFSERASPVQWMGPARFHAPPISIDELPPIAGVILSHNHYDHLDHA
                     AVMQLAGKTARFIAPLGVGDQLIAWGVDPAKVEQLDWWQSTEASGLRLTATPGQHFSG
                     RGLGDSDRSLWASWVIQDGDFRIFFSGDTGYFDGFKAIGEKYGPFDLTMIETGAYDPR
                     WAFVHMQPEQTLQAHLDLRGKWLLPIHNGTFDLALHAWQQPFERITALAKANSVPVAT
                     PMMGEALDMQAPNAGTRWWEQVQL"
     gene            54852..55595
                     /locus_tag="QEL58_000142"
     CDS             54852..55595
                     /locus_tag="QEL58_000142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012480415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HDS1674669.1"
                     /translation="MNIASSTPVALVTGGSRGIGAAISRRLAADGFAVAINYAGRHQE
                     AEALATELMAKGGQAIALQADVANPQSVQSLFDAIEARFGGVDVVVNSAGVLELASLA
                     ESEDTLFDRLIAINLKGAFNVLRESARRVRDGGRIVTLSTSVVGFKLERYGVYAASKA
                     AVETMSAILSKELRGRGITVNAVAPGPTATSLFLEGKSAELIDRLAKMSPLERLGTPD
                     DIAAAVAFLAGADGGWINGQVLRANGGAV"
     gene            55612..56109
                     /locus_tag="QEL58_000143"
     CDS             55612..56109
                     /locus_tag="QEL58_000143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1097 domain-containing protein"
                     /protein_id="HDS1674670.1"
                     /translation="MNPIPVSRSAYALVTVTAALTAAFAAAGALHAGWPVWTMFIGWI
                     AFFTRLQGTRSTIENLACVWFGLGIGALATLAVGLLSPSLGPSLAVPVVVLVVALCVV
                     ALRGLPVLNNLLGYFLGLVSWFAAHLEPSLAHLSELAAASALGSLAAWTAHTVPQRLL
                     ARARP"
     gene            56133..57026
                     /locus_tag="QEL58_000144"
     CDS             56133..57026
                     /locus_tag="QEL58_000144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HDS1674671.1"
                     /translation="MSHTILITGASSGFGLMTAKALALAGHVVYASMRETRGRNATRV
                     ADIAQWADAHHADLRSVELDVQSDASSQAAVEQVLADAGALDVIVHNAGHMVFGPAEA
                     FTPEQLMQQYDVNVLGTQRVNRAALPHLRRRGNGLLVWIGSSSTRGGTPPFLAPYFAA
                     KAAMDALAVSYSTELSRWGIETTIMVPGAFTKGTNHFLHSGTPADTAIAADYENGPYA
                     GVADQALKGLAGLEPADADPEEVARQIVRVVGLPHGHRPFRVHVDPSQDGAEVVNAVA
                     DRMRREMYASIGLADLLSPRG"
     gene            complement(57121..57618)
                     /locus_tag="QEL58_000145"
     CDS             complement(57121..57618)
                     /locus_tag="QEL58_000145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013594309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HDS1674672.1"
                     /translation="MEFNFTLKYRLPERCDDVGVLERRLVEAGCDDALLGSGLPGRMA
                     LAFCRDADSAVVALCSAVDDVQRAVPGAELVEVSPDLVGLTDVADLLGMSRQNMRKLM
                     LANPQSFPSPVHDGSTSIWHLADILGWLRARGSEKVTTEMAELAAAALQLNLARERRR
                     LQPKA"
     gene            58116..61232
                     /locus_tag="QEL58_000146"
     CDS             58116..61232
                     /locus_tag="QEL58_000146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008268466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="discoidin domain-containing protein"
                     /protein_id="HDS1674673.1"
                     /translation="MAFRVERSTVLKLPSSFRPTAALLFVGLAFSAQAQNLPARDQWR
                     ASASSQQVPAMAISHLIDNDPSTVTGGAFSPGHWFQIDLGAPATLAGVRLTWDVSHPE
                     GYTLQTSLDGAQWQTAYTMGDSLGGVETLYFTPRQARYLRLASPQRTSDWGVSIFEME
                     PLDTSLSARVVGLDATQSAVLWQGGSAVAIPAGKGGVHTLDITLPRPQPSTGLAVDWA
                     SVHGAAVLQAQDGKGRWHELAKDAQAATRQQSWLAASAPLDIHALRLTVHGDAPKIAR
                     IRLLGPKAVMTPMKRYQIAASGAQRALFPASLQMQQTYWTAVGVHAGRQKSIFDEYGN
                     LEAFKGAPLVQPIWRNADGNAAGAAGQTVQHALRDGWKPMPSATWAPQPGLELRSEAF
                     AIERDGQPVTLLRHRLHNSGTTTINGTLTLVVRPMQMNPPWQNGGLSPIRDVSVERQA
                     VRVNGRTLLHSLTPVTASGAAPFGAEGATEITAAIAAGTLPSTQQARDDQGLAAAALS
                     YRVSLPPGASDAVVVAFPLGTAAADANGALPDTPPLDLSSLPHGADPAFDALAAQASA
                     DWQARLGQVGLRLPDPSLVDMLRAQAAYMLINQTGPAMQPGPRNYNRSFIRDGMATSA
                     VLLRMGEAKVARDYLAWYSEHGVHANGLVSPILNDDGSVNTGFGSDIEYDSQGQYVAL
                     VADVARLDGGPESVRAYLPKVKAALRFLQELRERTLVAGYMAGQPAPERFAGILAPSI
                     SHEGYPSPTHSYWDDYWGLKGWHDGAWLADALGDHETAVWARQQYKALYDALHASIRA
                     TMAWKGIDFIPSSADLGDGDPTGVSIALDPTGAQSVLPDDALRTTFARYLEDVRKRNQ
                     PGALYAYTPYEIRNVLSYVHLGQPEAADELLQGLLHDRRPLEWQVLAEVVHSRLRFPR
                     YLGDMPHTWIGAEYGRTLFGMLMREDDDALSLLPGTPPSWVAGDGLAVERLPTAYGTL
                     QMQARQRDGTLVVTLGDGLRNDTAVKVWWPERTIPKSVRVDGRPVADFDAEGVRLAKP
                     FRTLEARW"
     gene            complement(61321..62295)
                     /locus_tag="QEL58_000147"
     CDS             complement(61321..62295)
                     /locus_tag="QEL58_000147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006362509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDS1674674.1"
                     /translation="MSPAAPRRPSRSTLLIVGVLVIGIAGIVYSRVRQAPDAGNVAAA
                     SLAGANTAVLKGTLDPKAQALIPAGYRFVTPGTFTVATHPGQLPLADYGADSKEVVGI
                     EPDIARLIADALGLKLVIVPVAWADWPLGLESGKYDAVLSNVTVTEERKKKFDFSSYR
                     YDLLGIYTRSDGPIRKIEKPADVAGLKVVVGAATNQDQILRQWDQQNIAAGLKPVEYQ
                     YFDDAVVGRLAVITGRADVSFEPNATGAYSARDGKVRRVGLFPGGWPNAAAISVTTRK
                     GSGLADAVTQALNTQIGSGTYAQALARWNVAEEAVPQSQTNPPGLPAL"
     gene            complement(62312..64057)
                     /locus_tag="QEL58_000148"
     CDS             complement(62312..64057)
                     /locus_tag="QEL58_000148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008267173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease/ATP-binding
                     protein"
                     /protein_id="HDS1674675.1"
                     /translation="MSTPSTALDGIAARPAPAPALKIVPARHPLQVFGTMLALALILI
                     ALQSVLGNPRWGWGTFAEWFFARPVLEGLGRTLLLTALGTGLGFALGTLLALARVSGS
                     PLLSAVSWGYVWLFRSIPLLVLLLLLNNLGYLYSTIELGVPFTGISLFSYPTTQLIGV
                     FTAAVLGLTLNQAAFSAEVIRGGILSVDHGQYEAAAALGLPRGRQVRRIILPQAMRSI
                     LPAAFNDVIGLAKSTSVVYVLALPELFYTVQVIYRRNLEVVPLLMVATVWYLVILTVL
                     SLLQRRVEQRFARGQLQRERSVSRVSSPTRAQHDATPRATNRPRIAAQVEAGEGAAVS
                     LHGVGKVFGDQPVLEDVHLDLRAGSVTVLIGPSGAGKSTLLRLINHLERADSGYVTVG
                     GQLIGYRRDGDTLYELPEREIRRRRAEVGMVFQGFNLFPHLTALENIIEAPIAVRGVS
                     RAEAEQQARTLLERVGLADKADAFPRQLSGGQQQRVAIARALALQPKVLLFDEPTSAL
                     DPELVAEVLSVIEELARSGTTLVIVTHELSFARRVADHVVMMDQGRVIEQATPEALFQ
                     RPRQQRTADFLAKTP"
     gene            complement(64054..64605)
                     /locus_tag="QEL58_000149"
     CDS             complement(64054..64605)
                     /locus_tag="QEL58_000149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005416281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDS1674676.1"
                     /translation="MSSNERFFYTSVDDPLARPLFDGLEQEYDSRYADVRRRIGGSAR
                     EELQRYPAQAFAAPVGAFVLLLRDGVAISGGAFMPHRDPETAEFKRIWTLPGLRRQGI
                     ARRVLQELEDQAARQGYRRVFLTTGFRQPEAVGLYLSHAYTALFDLQADPETIAHLPF
                     EKYLQAPASRVAQTQAVLHGAHA"
     gene            complement(64602..65822)
                     /locus_tag="QEL58_000150"
     CDS             complement(64602..65822)
                     /locus_tag="QEL58_000150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HDS1674677.1"
                     /translation="MSGENAVAPGHARRSSPTTGVLPEIAARADAAIAIRHDLHRHPE
                     LAFEEHRTSARVAELLQQWGYEVTTGLGGTGVVGTLQRGQGSRRLGLRADIDALPIHE
                     DSGLAYASQTDGLMHACGHDGHTAILLSAAHYLVHHGRIDGTLQLVFQPAEETGSGAS
                     KMIADGLFERFPVDAIYGLHNWPGVPVGHFGFVDGPAMASVDWARLKVIGKGGHGAEP
                     QGSVDPILVAAHIITALQSVVSRNVDPRQMGVVTVGSIHGGQAANVIPDVVELTLTVR
                     AYLPEVRDTLRRRTIEIAEQTAAAFGARAEIAFPRGFPSVINHPQQTAYIRGVAEAGF
                     GAEQVVPGFAPRTASEDFAFLLQARPGSFVFVGNGDSAPLHSPRYVFNDAAIAPAASL
                     WARLAEDYLVKDVA"
     gene            complement(65827..67170)
                     /locus_tag="QEL58_000151"
     CDS             complement(65827..67170)
                     /locus_tag="QEL58_000151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005413124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HDS1674678.1"
                     /translation="MSTTPRHIPFGIMLQGPGSHMHAWKHPSNPADASVNLQFYIDIA
                     RTAEDNGIAFGFVADGLYINEKSIPHFLNRFEPISLLSALATATRKIGLAGTLSTSYS
                     DPFTVARQFASLDLLSGGRAGWNVVTSPLEGSGRNYGRPHPEHALRYQIADEYLEVVQ
                     GLWDSWDDGAFVRERDTGTFFAPDTFRRLDHKGRFFQVEGPLNIQRSPQGQPVIFQAG
                     SSDDGIALAGKYADAVFTHSPSLEETRAFTQKVKNSAIAHGRSGNDVKIFPGIGPIVG
                     RTAEEAEAKYQAIAALATLEDALAYLGRFFDHHDFSQYDPDAPFPELGGIGSNSFRST
                     TDRIKQDAREKGLSLRQVALEAVSPRPNFIGTPEHVADELIRWFDAGASDGFILGFAA
                     QREGLDDFVTQVLPILQARGYHQRELEGQTLREHLGLPYKASRHTSDAEPARKAG"
     gene            complement(67189..68166)
                     /locus_tag="QEL58_000152"
     CDS             complement(67189..68166)
                     /locus_tag="QEL58_000152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HDS1674679.1"
                     /translation="MSYLISVLDKSPVAEGASPEQALRHSLQLAQRAEQLGYHRYWFA
                     EHHAAPTLASPAPEVLAAWVLAQTRRIRIGSGGVMLRHYAPYKVAENFNLLSALAPGR
                     VDLGVGKAPGGLPASTAALAAGRPAFADFDQQLRDLEGYLSGAEADALARPLPQQAPE
                     RFLLGASPQSAKQAAELGWRFVYAAHFDGDPKHIEAAFEAYRSASTQPPLLATVAFAA
                     PTTEAAARHIGALRVYKLHLGPGQTVNLPSPEAAAEYARQVGVADFRIEETRPSVLSG
                     DAQHVRDELDALHRRFGVGEFILDAPVADLDARLTSLELLSPAPRAAVA"
     gene            complement(68181..68543)
                     /locus_tag="QEL58_000153"
     CDS             complement(68181..68543)
                     /locus_tag="QEL58_000153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005416277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3088 family protein"
                     /protein_id="HDS1674680.1"
                     /translation="MSLDATDKPILFLLDREFEDGQLPGQRFFCRHSLLLEGALSSID
                     GLDAQLDVRRIGFARPRREVIAEIGEQDQSLPKLVLPQGVRSELASGAHQDRQYISGA
                     EPILAALNGLLGIPVAHP"
     gene            complement(68700..69281)
                     /gene="msuE"
                     /locus_tag="QEL58_000154"
     CDS             complement(68700..69281)
                     /gene="msuE"
                     /locus_tag="QEL58_000154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FMN reductase"
                     /protein_id="HDS1674681.1"
                     /translation="MSSALKVVALVGSPTSSATSRTLLLVRHLLESLQQRVHANVDLV
                     ELAPIARSLGQALSRAEAQPEVEQALQAIEAAELLVVAAPVYRGSYPGLFKHLVDFIE
                     LEALVDTPVLLAATGGSERHALVIDHQLRPLFSFLQAHTLPIGVYATPADFDGERIHS
                     AALQARIALAAERAIGHLATQARVLPVPLRRIA"
     gene            complement(69369..71789)
                     /locus_tag="QEL58_000155"
     CDS             complement(69369..71789)
                     /locus_tag="QEL58_000155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010484651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDS1674682.1"
                     /translation="MTGSRTSTRTVKNSSTPIDVISAEDLTATGQGNLLEALQRALPS
                     LSQIGGYQSDQESLIRGYQLRNLSPGYTLVLVNGKRRNASAYVSGANGGGFPGHAWAD
                     LALIPVSAIDHVEVLRDGASAIYGSDAITGVVNVILKSQAHGGDLSVESGQSIDGDGS
                     RTSVRANVGLPWGADGFVNLSGESTRQHHAIRTRRYIDGYLSYPAVDANGNLVALRPN
                     NRLPAGASPNPAEANRNAEANTILSSPSYALKAFAVNVGHGLGESAQFYANATASDRT
                     AQAIQNFRLPATIFTTYKAPGVLSVFPDGFLPVLETKEKQYTGTAGVKGQLAGWDYDA
                     SLTGNRSTVRTYTRNSVNYSLPYPGSPTDFYDGKLDYQQGIANLDLRRGFEVAAFASP
                     LEVSAGAEYQHEQYEREAGQWESYTGFGAAAFVGYSTADAVKATRNSKAVYVGAAANI
                     TSRWYLDAAARWEDHSDFGSVSTGRLTTRFDFTDALGLRATVSNGFHAPSLGAQFYQA
                     TGSCPCGTTLVAQVSSPAAIALGATPLKPEKATNYSLGVTWDPSPAFHLAVDAYQIDI
                     RGQLGQSSQIGYNAQDPARVTDNSGTVLSAAQKNTIDALLGSAGISILPGDAFYASYF
                     TNVGNTRTRGVELTLEANQETAWGKLRWSYAANVGRTTIQKVSDIPAALQGLPNINLL
                     TKSSEYALRFRTPSYTQVAGLGWQNGRWRSNVDFTYYGPIKRLNNGVEYKQPPVLVTN
                     LSGAVELGAGWSAALGINNVFDKRTRKVPEYARSATDVASIETTWDSGDVLGNVGAYW
                     YGRINYRF"
BASE COUNT        12169 a        24772 c        23199 g        11756 t
ORIGIN      
        1 ggcaaccgtg cccaatccgc gttgcatccc tctggtagtg ccggccgctg gccggcaacc
       61 gtgcccctct ccggtcagcg cagcagcact tcgcgcagcg cggcatagtc agccgcgagc
      121 ggttcagcct gcgccggccg ctgcaacagc gcatccagtg ccggcggcac cgccaccgag
      181 gcgccgatca acggctcgac caccgcctcg aacttggccg gatgcgccgt ggccaccacc
      241 gcccagtcgc ccttggcgcc gcgtgcacgc aggtcctgca ggaccttgac cgccgtggcg
      301 gtatgcgggc agaacagctc gccgctgctg gcgtgcgccg cagcaatggt ggcgcggatg
      361 gtgacgtcat ccaccgcaaa tgcacggaag gctgcgcgca gttcggcatc gtcgccgtgg
      421 tacagccagc gcaggcgctc gaagttgctc ggcgcgccca cgtccatcgc attggctacc
      481 gtcgccacgc tggattgcgg ctggtagtca ccgccattga aatacgccgg cagcaccgca
      541 ttggcattgg tggccagtac gatctgcccg atcggtacac ccagtgcgcg cgccagcacc
      601 gcggccatcg cgttgccgag gttgccggtc ggcaccacca ggttgagccg gcgacgggtt
      661 tcggcatgat gggtcagtgc cgcatgcgcg tagtagctca tctgcggcaa caggcggccc
      721 aggctgatgc tgttggccga gctcaacggc acctgcacct gcagttcgcg gtcggccagc
      781 gcctgcttga ccatcgcctg gcaatcgtcg aatgcacctg ccacccgcag ggcctggatg
      841 ttgtcgccga aacagccgag ctggtgcgcc tgccgtggcg acacgcggcc atccggatac
      901 agcaccacca cgcgcacgcc gggttggcga tggaacgccg ctgccaccgc tgcaccggta
      961 tcaccggatg tggcaacgac aatcgtcagg tcgcggccct tgcccgcctg cagccgcgac
     1021 agcgtaccgg cgaggaagcg cgcaccgatg tccttgaacg ccgccgtcgg cccatggaac
     1081 agctccagca catggtcacc agcgccgagc gggcgcagcg gtaccgggaa gtcgaaggcc
     1141 tcgcggcaga tcgccggaag cgcagcctca agtgcatcgc cagcaaagaa cggcgcaagc
     1201 agatcggcgg cggtatcggc cagggtcgcc ccagcctgca gttcgcgggc gggcggcaga
     1261 agctcgggaa cgtacagccc gccatcgggc gccaatcctg cggcgatcgc cgcgctgagg
     1321 ccaacggccg gggactggcc gcgggtcgaa acgaagtgca tgggttcgat atccagtagt
     1381 agggaggaat tcagcacagg cgggctcccg gcgcatccag cggcgacacc caggcatcac
     1441 tgtcgaagcc ggcagccgcg aacgcggcct gcacgggcgc caccgcggcg cgggcctggt
     1501 cagcatcctc gaaccaggcg aacacgctgg ggccggcacc agagatgcca gcacccatcg
     1561 catcggccga cagcgctgca tcgcgcgcgg cctcgaaacc ggcgatcagg cccgcccggc
     1621 gcggctccac cagcacgtcg cgcaacccgg cgcggaccag cccggcatcg ctgcgatggc
     1681 aaccgctgag gacgagcgcg aggttcgcgc tctgcgcgac gaattcgccc agcgcgtaac
     1741 tgccctgcaa tgcctggcgc gcgcgccggg tttccagcac cgcgtgcgga tgcaccagca
     1801 ggctgtgcca gctggcaggc accgggatcg gcagcaggcg atcagccgtg cacaatgcca
     1861 gcccccccag cagcagcgga ccgacgttgt caccgtggcg gccgccactg gccaccgcct
     1921 cgccatccag cgcatgcggg tacaacgctt cgcgtggcag cggcgcatcc agcagcgcat
     1981 tggccgcgac cagcgccgca acactcgacg ccgccgagcc gcccatgccg gagccgaacg
     2041 gaatgccctt gtcgatctcg acggcgaaac cgaagtccag gcccagccgt tcgcgcagcg
     2101 acatcaacgc agcacccgcc gtgttcccgg ccgcgtccag cggcagttcg accgtgctgc
     2161 cacggatcgc ctcgatgcgc accaccggtt cgtcgatccg gcgcacgctt acggtatcgc
     2221 cgaccccggc gatggcatga ccgagaatgt cgaatcccac tgccacgttg gccaccgagg
     2281 cgggcgcgta cgcacgtgcg atcacaggcg cgctccttca cccgcggcca cgcgcagcag
     2341 atcggcgaac acgccggccg cggtgacttc cgggccagcc cccggcccct gcaccacgag
     2401 tggattgtcg cagtagcggc gggtgcggaa ctgcaccacg ttgtcggtca gccgcaggtt
     2461 ggcgaaggcg tggtcggccg gcagctcctg caggcccacc gaggcaccgt cggcgccgag
     2521 cttggcgaca tagcgcagca cggcgccacg cgcgcgtgcc tcctgcagcc gctgcagcag
     2581 gctggcatcg gactcgccca gccttgccat gaacgcatcc acgctgccgt cgcgcagcag
     2641 ggccggcacc aggctttcca cctgcacctg ctccaggctg agcgcgtggc cggcctcgcg
     2701 ggcgaggatc accagtttgc gcgccacgtc cacgccggac agatcatcgc gcgggtccgg
     2761 ttcggtgtaa cccatcgacc gtgcctgcgc gaccagcgcc gagaacggct ggctgccatc
     2821 gaagcggttg aacaaccagg ccagcgtgcc agagaagatg ccttcgatcg ccagcacctc
     2881 gtcaccggta tccaccaggt cgcgcagcgt ggtgatgacc ggcaggcccg cacccaccgt
     2941 ggcctcgtaa cggaaacgcg cgccactggc cgccgctgcg gcacggatgc gctggtagcg
     3001 cggcagcggc cctgcaccgg cctgcttgtt cggcgtgacc acatggatgc cggcggccag
     3061 ccagccctcg tagcgctcgg ccacctcggc actgccactg cagtcgatca ccaccgcatg
     3121 cggcaggtgc gcagccagca gatgctcggt gaagcgatcc aggtcgctgg actcgccggc
     3181 ttcctgcaat gcctggcgcc aatcggcatg caggccgtcc acttccaggc gcatgcgcga
     3241 acgcgaggcc agcgcacgca ggcgcaggtc gacattggcc ttggccagca actgcgggcg
     3301 cgcggccagc agctggtcca gcagcgcggc accgacattg cccggcccga tcactcccac
     3361 cgcgaaggtc tgcggcgaca gccagaagcc ggcatgtgcg gcgcgcagcg cgcgggtggc
     3421 atcggcactg accaccgcca ccgagatgtt gcgttcggac gagccctgcg cgatcgccag
     3481 gatgttcacc tgcgcacggc ccagcgcctc gaacaggcgc gccgccacac cgggctggcc
     3541 ggccatgccg tcaccgaccg cggccagcac gctgaccccc tcgctgacct gcacgcgctg
     3601 cacctggccc accgacaact catgcgcgaa cacatgcagc agggcgtcgc gaccgcgcgc
     3661 agcttcggcg gcacgcacca cgcagcagat tgaatgttcc gacgaaccct gcgagatcat
     3721 caccaccgat acctgcgcct ggcgcagggc ggcgaacacg cgctcggcgg tacccggcac
     3781 gccaatcagg ccggtgcctt ccaggttcag cagggccagc ccggggctca gggtcaggcc
     3841 cttcaccggc ccgcgcggcg agcgctcggc gctgatgcgc gtacccggat gcgccggctg
     3901 gaaggtgttg cggatgaaga tcggcagccc gaggcggatg gccggtgaca tcgtctgcgg
     3961 atgcaccacc ttggcgccga aataggccag ttcgcaggcc tcgtcatagc tcagcgactc
     4021 aagctgcacc gcttcgggca ccagccgtgg gtcggccgac agcacgccat cgacgtcggt
     4081 ccagatgtgc agttcatcgg cgttgaacag cgcggcgaag atcgcgccgg aatagtcgct
     4141 gccgttgcgg ccgagcgtgg tgatgcggtc atggcggtca cgcgccacga aaccggtggc
     4201 gaccaggcgc agttgtggat gctgcaggcg ccatttggcc aggcggtccg cactggcctc
     4261 ccagtcgaca tccacgccca gttcgccatg cccgaccacc agcacgtcac gcgcgtcgag
     4321 caccgcgcag tcttcgccgc gcgcacgcag atgcgtgccc agcagctgcg cggagaacac
     4381 ttcacccagg ccctgcacgc gatcgagcac ttcacggggc agctcgccga tcactgccag
     4441 cgcggccagt acctcggcca gctgctcgaa gcgcgtgtcg atccattcga cggtctcgcc
     4501 cacctgctcg cccagcagcg ccacggcagc gccacgatgg cgcgcgcgca gcgcatgcca
     4561 ggcctcgcgc cagccttcgt cacccttggc ggccagctgg gccagctcga tcagcgcatc
     4621 ggtgacaccc ttcatcgccg agacgacggt gacctgcagc gattcggggc gggccagcag
     4681 caggccggca acatggcggt agcgttcggc gtcggctacc gaggtgccac cgaacttgtg
     4741 cacgacgatg gacggcgcag ccaggtcggc cggggcaacg gaatgggcgg gggcgtggga
     4801 agacatgcag acctcggtag gaggccccgt cgcatgcagg tgtcgagttt ccccgccacc
     4861 tgtatggtgc ggggccgtgg ttttcgggag ttacacgaag acgacgggcc gcaccagggc
     4921 agtggtgacg gtggtggtgg taatggtggt ggtggcgacc ggcgcagtcg aacggcccgc
     4981 ggtggcgggg gcgttcaggc tggcgtgggc ggcatcaagg accatggcgc acagaaaaca
     5041 ccgcgcgccc tgccgctgtc aagtgctgcg atgcaaaaaa acgctgccgc gatcatcggc
     5101 caacgtgccg acatttggtt gcatctgaga caaagtagcc atcagcacgc ttgacggccg
     5161 cattcagccg gcatgttcgg cgatcgcccg cggtgcgcga tgggcatgcg cgcacagcat
     5221 caccccggcc accaggaaca cgatcgccag cgcctccagc agtgagggcc agcgctgttg
     5281 ccaggcaaag gcatagagca gcgcgaacag cgtctcgaac acgatcatct ggccggtgag
     5341 ggtcaatggc agcaggcggc tggcgcggtt ccagaacgcg ttgccaagga tcgaggcaac
     5401 caccgccacg ccggcgctga tcgcccagaa gccgccccac tgtgccggcg tgtggctgcc
     5461 ggtgtggccg atgaaggcca tcggcaccag cagcagggcc aggccaccgg tggtgacgcc
     5521 cgtcagcagc gaccagtcgt ggctggacag atcgggccgc cgcgccagcc agcggctgtt
     5581 gccgatcgag tacagcgccc acgagaacaa cgcaccgaac gcgcacaaca ggccgatcag
     5641 gcgctgccgc cagggtgtcg ccaggtgttc ggacatcagc gcttcccaac cgaccagcgc
     5701 tacaccgagc acgcacaggc ccagtgccgg caacagctgc ttcagcggca ccgcgccttt
     5761 ctcgcgcacg cccaccaggg tcaccaccac cgggatcagg ccgacgatga gcgaggccgc
     5821 cgcgccgccg gcccactgca cggcggtcgc cagcagcagg aagtagacca ggttgccggc
     5881 caggctgagc cacagcaggc ccaaccattc ggcgcgcccc aactgtggcg ccagccgctt
     5941 ccagcgcggt agcaacagcg caaccgcgat caggccatag accaggtagc ggccggcgga
     6001 cagttgcagg gcattgaacg actgcagcac ggcgggggcg aggaagacca cgccccatag
     6061 cgcgccagcg gcaacgccat tggcgatgcc ccgggccatc gggttgttgc gcattggaat
     6121 tcttcgtggg ggaagaggcc gcgcagtgta gtcggtgggc ggcggagccc tcttgaccca
     6181 ggctactgcc ctgctgcttt tgtagcgtcg ggccatgctc gactgctttt gcaccggcta
     6241 tcgcgcgaac ggcagccggg catggctcga cgctacagcc ctgcgctcct gcgccacgcg
     6301 gccggggtct gcccacactc gcggcgcagc gcacgggtca gtgcgctctg ctcggaatag
     6361 cctgcagaca gcgcgatgtc actgatcggc gcggtgctgg tgcgcagctg gtgcttggcc
     6421 cagcgcaacc ggctggcgct gagccaggct tgcgggctga gcccgaattc acgctggaac
     6481 agcgcgtgca ggcggctctc gctgacccca acgaacgccg ccatgcgggc caccggccac
     6541 gcctggcccg ggtcggcctg cactgccgca cacagcccct gcatgcgagc gccactgccg
     6601 gccggtgcga acgcctgcag caactgcgga agcagggctg gcatcggccg gccggcctgc
     6661 acatcggcca ggcaccggcg cagcgccagc ggcaggtgca accagcgctg gcggcacaga
     6721 tgctcctggg tgccgtcatc cagcacgccc ggcgcgcagt cgacgatcac gaaaccgttc
     6781 gggccatcgg ccatctggtc atgggcctcg ccggcagcca cgaaagcgcc ctgcagcagg
     6841 tccaggcggc caccacgccc ttccatctcg aactgcagtt cgccctgcag cggcaacacc
     6901 cactgcgcgt agtcatggcg gtccaggccg gtggcctggc cgtagtgccg caggtggaag
     6961 atcgcgccca tccgggcagt gtgcgcgtgt aacacaggcc gtgcaaaccg ctgctatagt
     7021 cgggccgtca acccacgcag ggagtgcagg tcatgaccca tcagcacgcg tatttgctgc
     7081 tcgccgccag cctcggcctg gccctcgccg ctaccgcttc cgcccaggag cgcacgccgc
     7141 cggccccgca ctgcatggac gcggtcggcg tacaggaggt cgagcaggcc tcaccgcgct
     7201 cgatcgcgct gcgctccgcc tccggccagg cctatcggat cgacttcaac gaagactgcc
     7261 ccggcgttcg cggtgccacc acgctgaaac tggaggcacc tgccggctgg gcctgcggtc
     7321 gtcccagcga gcgggtggtg gtggacggcc acagctgcgc cgtcagtgcg gttacgccag
     7381 tgcagaaccg tgattacgcc agcgttgcgc gcgacagtga tcgcctgcgc accgccacgc
     7441 tgccagccct gaccatccgc gagcgaaagg aagtccgccg cggtttcggc ggctcgccct
     7501 cgtactgctt cgccacccgc aatgtgcgtg gctggtcgtc cgacacgcag ggcatgctgg
     7561 tggaaaccaa tccacggcgc agcggcggcc atcgcttcta ccgggtcgaa ctgggcagcc
     7621 actgcctcca gctcgaccgg tcgccggaat tgagcttcca gtcgggcatg cagaatggtc
     7681 tgatctgcgg caacccgggc gatcgggtgg tcaccgccga tttcgccagc tacgacgagc
     7741 gcagcgacga actggcgccg ctgccccgct tcagccgccg cggtgcctgc accatccagg
     7801 cggtgtaccc ggcctccagc caggcgtcga actaaccgtc gacgccgagg aaggtgaacg
     7861 gcgcgctggg cacgaagtgg cccagcgcat cgccggcgaa ggtattgcgc tggtccttgc
     7921 caaggtcgag cttgagcacc gggccaccga aatcgacctt gttcagatcg acccagaaag
     7981 tgttcggggt caacgccgac tcgaagaagt acagccgccg cttgtggtcg gccacggtac
     8041 gccagcgcgt ggaggagatg ttcggctcgc ccggcgtggt gatgccgtac ggcaccgagg
     8101 cgttgcggat cacactgaac acactggcca gtgcctccac cggatcttcc gccttgggaa
     8161 tggcgttgat gtagaacgag gcgcgggcga agcgatcgga agagcggttc gtgcccggca
     8221 gcatcaccgt gccaccaatc tgctgccaat aggtgttgag cgccagctgc tggtcgaaga
     8281 tcggcgagtt ggtcatcacc tggtagcgcc ggtcatggtg gatgacctgg cggccgccga
     8341 tgtactcgac gatggcactg tcacccgtgg catcggacag cgacagatgc agcgtcgctt
     8401 ggcggtcctc gccaggcacc ttgtcggtga cgatcgagta cggctcacgc ttcaaggcag
     8461 ccaccgcctc gtccaccgtc gcaaaattgt cgagcacata ctgcgcccac agcgagatcg
     8521 ccaggcccgg cttgttgccg cgctgttgcg ggtactccga ttcgaccagc cacagcaggt
     8581 tggcgaccag gcccttttcg ttcatgccgt cggtggtcga cacgtcgtag ccggtggcca
     8641 ccacgctgcc gtagcgggca gtccaggcca gcgacttcgg gccagcctgc ccggtgcgtg
     8701 cgatgccacg cggcagcacg tagagattgg tggcgacatc caccttccag tccatcgaac
     8761 gcgcggtgat cacatcaccg ttgtcgccca ggtacaccgc gcgcgtgcag gccagcgccg
     8821 gtgcgatcgc ggacgccagc gccatggcca gcatcgccct tcccttccac ttcatccgtg
     8881 ccatgtcact gcgctccgtt ccccgtggtc catggatctg acccgatcaa tcgtgacaca
     8941 ggggtgaagc ctcaacgcac gaggcgatcg tgcagccaga agcccagcac catcgccggc
     9001 acgaaccaca gcgcttcacg cgatgccacg gcaagtccgg cgatggccgg cccggggcaa
     9061 tagccagccc atccccagcc gatgccgaac agtgccgcgc ccagcagcag gcgagcatcc
     9121 acatcatgtg ccgtcggcag ctggaagcga agggcaaacc agggctgcgc gcgacgcagc
     9181 acccaacgct ggccgattgc actgaccagc agcgccgagc ccagcaccca catcaacgtg
     9241 ggatcgaacg cgccacggat gtcgaggaag ccgagcacgc ggcgtgcatc ggtcattccg
     9301 gaaagcgcca gcccggcgcc gaacaatgcg cccgccacag cggcagccca gagggcgcgg
     9361 ctcacaacgg ggctccgccg tgacgaacca cgaacgtggt cagcatcgcg caggccatga
     9421 acaccagcac cgccagcagc gaccgtttcg aaccgcgagc catgccgcat acgccgtggc
     9481 cactggtgca gccactgccc aggcgggtgc cgaaaccgac cagcaggccg gcgccgatca
     9541 gctgccaggc gggcaaggca tcgcgcagca gtacacgtgg agcgctgccg ggcaccgact
     9601 gccaccacag caccagccct gccgctgcca gcaggcccat gaggaaggcc cagcgccagc
     9661 cacgctcgcc tctacctgcg cgcaggctgc ccgcagcgat cccgctgatg cccgcaacgc
     9721 gcccggtggc agccagcaac cacacggcag ccataccgat caacacaccg cccgccagcg
     9781 cgctccatgg caggttcatg ccccgccttc cttgatgcca tgcatggatt gccctcgaat
     9841 ttagatttct ctaaattaga cgcctctaaa caaaaaggtc aaccatgacc cacccgccgc
     9901 tcgacactgc cacgatggcc gagcacgcca cgcaggcggc cgcgctgctc aagagcctgg
     9961 cccaccctgc ccggctgcag gtgctgtgcc ggctggtcga gggtgaggcg ccggtgccgg
    10021 aactgcaggc actgaccggc ctcagcgctt cggcgctgtc ccagcacctg gcggtgctgc
    10081 gcggaatgca gatcgtggca acccggcgcg aggcgcaggc aatccactac cgcatgcagg
    10141 aaggcccggc gctgggggtg ctgcaggcgc tgtacaccgc ctattgcgga ggcggcgtgc
    10201 gctgaatctc aaccggcgtg cagtgccggc tgcaccaccg catccagcag gtcgaccggg
    10261 gtcggtgccg aacgatctcc ttccagggtc cggctgaaac cggaccagtc gctgctcgaa
    10321 agctggcgca gcaagcttgc ctccaccggc aacgcacgca tcgaccagta cggaaactgg
    10381 cgctggccca ggcggccgcg cgccagctcg atgatgtcga tgtggctgcc cgcctgcagg
    10441 atgcgctcat acaccgaatc gatcccgtct ggcggacctt cgatgtactg caggaagcga
    10501 tcaccgtcat gcagcagcac gccggtcacg cccgccatct tgttgaaacg cgcggcatcc
    10561 tcgaccagcg cctgcagccg ctcaacggag agctccggca gcgcccggct gacgtaggcg
    10621 atggcgcgaa gtggcatggt ccttccttgg cagggtgtga acgcacggta gcagttgcgg
    10681 acgagtccgt ctcattgcgg gcgcgcgttg cctgaagaat tcagcttgcg acgacgccgg
    10741 taccgtccca ccggcgcggg agcctcgctt cgaacaccac ctgccccgcc tcgttgcgcg
    10801 caccgatatg gccgccatgg gcccggacga actgatcgac gatgtacagg cccaggccca
    10861 ggcccttgct ctggtggaag ctggccttga acggctcgaa caggcgcggc aacagcgcgt
    10921 catcgatgtg gccggtgttg ctgacccgca tcaccaccgt gcgcacatcg cgcccatcca
    10981 gctgcaccag ggcctcgcag ccatgcgtca gcgcgttgcc gatcaggttg gcggcgatct
    11041 gccccagccg gtccatgtca ccctgcaggc gggtatcgcc gatggcgtcg aaacggatgc
    11101 gctcatgacc gtgcgcgctg cccgcctcgg caatcaccgc atgggtgacc tcggccaggt
    11161 cgcaggcact ggtctcaagg cgcaggccac cactgcggat acgcgagaaa tccagcagct
    11221 gctccaccat ccgcgccatg cgcagcgtgc tggcctcgag gtgctgcagc gtctgctgtg
    11281 cccccgcgtt gtcctcggga agctccagtg ccagcttgtc ggcacacagc aggatggccg
    11341 acagcggcgt gcgcaggtcg tgggtcagca ccgcggccat cgtctcattg agcttgagcg
    11401 ctcgctccag cgcttcattg cgcgccttca gcagctgccg ttgctggtac agctcgatga
    11461 agacattgac cttgctcagg atcacctgtg gcgccaccgg cttgtgcagg aagtccaccg
    11521 caccggtttc gtagcccttg aacgcacgca ccggatcgtc cggcgaggcg gtcaggaaga
    11581 tgatcggcac cgtgcggctg cggtgcgagc cgcgcatcag ctcggccagg gtaaagccat
    11641 cgatctccgg catgtgcacg tccagcaggg ccagcgcgac ctcgtgctcg agcagcagct
    11701 ccagggcctg cgcacccgag cccgccagca gcaggttcac accctcgcgc tgcagcaggg
    11761 cctgcatggc taccaggttc tgcggcacgt catcgacgat cagcaggttg accggggtct
    11821 gcgactgcgc agggtccggt ggcagcaggt tcatgcaaac aactccttca ggcgacgaca
    11881 catcaattca aggggcagca cggcgtcggc gccggcgtgc tgcagggcgg aggccggcat
    11941 catcgatgct tcggcttcct cggggcattg caaccaggca cggccgcccg cggcgcgcac
    12001 cgcggcaaca ccttcgctgc cgtcgctgct ggcaccggtc agcaacagcg ccagtacctg
    12061 cgcaccgaac acggcagccg ctgattcaaa aagaggatcg atggccggac gcgagaacag
    12121 caccggcgca tcgaccgaca acgctacggc ttcggaatct tccaccagca ggtggtagtc
    12181 cggcggtgcg aaggtcacgg tacccggctg cagcggctgc ttgtcctccg cttcacgcac
    12241 cggcagcgcg cagtacggtg ccagcacctc ggcaatacgg ctggagcgat cgcgtggcag
    12301 gtgcagcacg gccagcaccg gcgcgggcag cctgggcggc agtgcgccaa gcacggcctg
    12361 caacgcggca acgcctcccg ccgacgctcc caccaccacc accgcagggc gagcctgcac
    12421 caccatcagg ccaccttccg gtacaggcgg tgttcgcgcg agcagacgtc gaaggcatcg
    12481 tggtgatgcc caaactgcag cgattccttg ctgcccaggc cgaggaaacc acggtgcacc
    12541 agcgcctcgc ggaacaaccc gaccgcccgg tcctgcaggt cgcggttgaa gtagatcagc
    12601 acgttccggc acgacaccag gtgcacttcg gaaaacacgg tgtcggtggc caggctgtgg
    12661 tcggcgaaca ccacgttgcg gcgcagctgg cggtcgaaca ccgcgccatc gtaggcggtg
    12721 gcgtaatagt ccgacagcga tgccgtgccg cccgccgcca ggtagttgcg gctgaactgc
    12781 gccatgcggt cgatgccata cgcaccggct tcggcggtgg ccagtgccgc cggattgatg
    12841 tcggtggcat agacgatgct gcgctcaagc aggccttcct cgtgcagcag gatcgccagc
    12901 gaccacactt cctcgccggt actgcacccg gccacccaca gcttcaccga gggataggtg
    12961 cgcagcaccg gtaccacctg ttcgcgcagc tcgcggaaat aggccgggtc acggaacatc
    13021 tccgagacct gcacggtgaa gaactgcatg gcctgtgcga acagctccgg ctcgtgcagc
    13081 aggcggtgct gcagatcgac cagccgatca cactcgtagc gctgcatggc ctggcgcatg
    13141 cgacggcgca gcgacgacac cgcgtagctg cggaaatcat agtggtagcg ccggtacagc
    13201 gcttccagca ggattttcag ttccaggtcg aacagcgcct gctcgttcat tgccgcgagc
    13261 accagacgcg gcacagcgag accagcttgt cgacgtcgat gggtttggcg atgtaatcgt
    13321 tggcaccggc ctgcaggcag cgctcgcggt cgtccggcat cgccttggcg gtcagcgcga
    13381 tgatcggcag gtcctgcagg tggcgctgcg cacggatctc gcgcatcgcc gccaggccgt
    13441 ccttctccgg catcatgatg tccatcagca ccaggtcgac ctcgcgctcg gccaggcgat
    13501 ccaccgcctc ctggccattg cgcgcgatct ccagggtcac gcccagcggc tcaagcacgc
    13561 tggacagggc aaagatgttg cgcacatcat cctcggccag cagcacggtg cggccatcaa
    13621 gcacggtatc gcggcgccgc gcttcgcgca gcaggcgctg ctggtcgctc ggcaggctgg
    13681 cctcgacgct gtgcaggaac agggtcactt cgtccagcag gcgttccggc gaacgtgcac
    13741 ccttgatgat gatgctcttc gaatagcggc gcaggcgctg ctcttcctcg cggttgagcg
    13801 cgcggccggt gtagacgatc accggcggga agccgacatc gtcgttgccg gccatgtgct
    13861 ccagcaggtc gtagccgctg ccatcgggca gcgacagatc catcaccatg caatcgaagg
    13921 tgacggtgct gagctgttcc agcgcgccgg ccagagtacc gaccgcgatg atctgcagct
    13981 gctcgcggcc gagcagcagt tccaggttgt ggcgcagctc gctgtcgtct tcgacgatca
    14041 gcaggcgccg cacgtcacgc tggctggtct gctccagctg ctcgatggcc gccaccagcc
    14101 gctcgcgcgt ggtcggcttg atcgcaaaac caattgcacc cagctcacgc gccacctggc
    14161 cgcggtccat cgccgagacc acgtgcaccg gaatatggcg tgtgtcggga ttgcgcttca
    14221 agcgttccag aacactcagg ccggacacat caggcagccc gatatcgagc aggatgccgt
    14281 tggggcgcag ctccgcggcc agcgacaggg cttcctcggc cgtggtcgcg accacgcagt
    14341 cgaaatccag ctcgtgggcc agcaccacca gcgcttcggc gaaggtggcg tcgtcctcga
    14401 ccgccaggat caagcgcccg gcgcgctggc ggcggccgcg gtcatcggcc acattggcga
    14461 tggccggcgc tgccgccggg gcgaccgcag gcgcggcaac cgtgcgtgcg gcgaccgctg
    14521 ccacgggctg cggcgaagcc gcgttggaca ccggggccag tgcttcaccc gacgccgcta
    14581 ccggcgcgcc ctgcagcggc agctccagga tgaagcagct gccgcggccc ggctcgctgt
    14641 cgacgtggat gctaccgccc atgcgctcgg caagatcgcg cgagatcgac aggcccaggc
    14701 cggtgccgcc gtaacggcgg cgggtactgc catcggcctg gcggaatgct tcgaagatga
    14761 cctgcagctg ctcgcgggca atgccgatgc cggtatcggc gacttcgaag cggatgcggc
    14821 cactgcccgc agcacgaacg tgcaggctga ccttgccgtg ttcggtgaac ttcagtgcat
    14881 tggccagcag gttcttcagg atctgctgca ggcgctggct gtcggccacc agctggctcg
    14941 gcgccagcgc atcggcctcg atctgcaggg ccaggccctt ctgccgtgcc atcggctcga
    15001 aggtctcgcg caggcgctgc acgacgctgt ccaccactac cacttcgtcg gccagctcga
    15061 cgtggccggc ctcgatgcgc gacagatcca ggatgtcgtt gatcagcgcc agcaggtcat
    15121 tgttggacga caggatggcg cgcgcatact tcacctgctc gtcggtcagg gtgccgtcct
    15181 tgttgtcggc cagcagcttg gccaggatca gcgagctgtt cagcggagtg cgcagttcgt
    15241 gcgacatgtt ggccaggaac tcggacttgt agcgcgaggt ggccgccagt tcgttgctgt
    15301 tgcgcaccag ctggccctgc gccaccagca gcgcctgctt ctgcgcctcc agctcgtggg
    15361 tgcgctcttc cagctggacg ttgctctgct ccagctcggc ctgttgttct tccaggtggc
    15421 tctgcgactg cagcaggctg cggctctgct cttccagttc ctcgttggcc acccgcagtt
    15481 cttcctgctg cgcctgcagt tcctcaccct ggcgctgcga ttcctccagc agtaccacca
    15541 gctgtgcacg cagcagcgat gcccgcagtg ccatgccgat ggtctcgccg cagcgttcca
    15601 gcagctcgcg atccaggtcg cgctgcccgc ctgcctgggc gcggcccagt tcgatgaccc
    15661 cgaccacggc gccgtcgttg ctgatcggcg ccaggatgcg ctcgctcacc ggcagccgcc
    15721 ccaggctcgt ctgcagttca agcacggcgg cgtcaccgcc gtgcagatgc cggatgcgtt
    15781 catcccgggc cacctgtccg gccacgcctt cctgcaatgc cagcgacgcc ggcatgcccg
    15841 acggcaacgc catgccaccg gtcagctgca ggcgcccacc ttcgatccgg tacaccgcgc
    15901 caatgtctgc ctgcagctgg ctgcccagct gggtagccgc cgcctcggca atctgctcag
    15961 gccccaggtc gccacgcagg ctcattgcca ccgcgttctc tgcttcctgc agccacagtg
    16021 cccgcatcgc ctgccgccgc gcttcgatgg cgcgggagac gatcaacgcg atcatcagga
    16081 acgcgcagcc accaatactg cgattgacga acgagaacga tgaattgttg ctggccgggg
    16141 ccacattgaa gccgatcacc agcagcacac aggcgatcgc ggcaacgatg aacggcgcgc
    16201 gcacgctgcg ctggaacacc gtcacgccta ccgcgaggaa ataggccagc cacaccgcat
    16261 agcccagcgg caccaccagc tcaagggcga tggtggccgc cagcagtacg gcggaggtca
    16321 tccagatcca gcggtcacgc gtggtcgcac caggacgcat gcaggtcggt tccagagggc
    16381 aaagggtggg tgatggtact ccgtgtcgca ttcagccgca caggaccttt ggcacgtgcc
    16441 gcacctgcac gcatccttca cacttcaatg cctagcttca cgtccctcac aggggtaaca
    16501 cttatttcca cgtggacgct gcagcctcta cgacgtccgt actgacggac ccttcccgac
    16561 aactgcgact gctgattgac agcgtgcgcg atcatgcgct gtacctgctt gatcccgaag
    16621 gcatcgtctg cagctggaac ccgggcgccg aacgcatcaa gggctattca gccaacgaag
    16681 tggtgggaac gcatttcggt cgtttctacc tgccggccga gcgcgatgcc ggtgagccgc
    16741 aacgcctgct tcgcctcgcg gcgcagcacg gccatgtcgc cagcgagggc tggcgggtgc
    16801 gccatgacgg ctcttcgttc cgcgccagcg tggtcatcga accggtcgtc gagggcggcg
    16861 aactgctcgg gttcgtcaag atcacccgcg acatcaccga gcaatggcag gcacagcgcc
    16921 tgctgcgcga tgcccagcgt gcactgcgca acacccagca gttcgagacg gtcggccggc
    16981 tcagccgtgg cctgtcgcac gagttcaaca acctgctgac caccatcggc aacgcgctgg
    17041 acctgctgtc actgcgcgtg agcggtgacg acgtgcgcgc cgccgaactg ctcgatgccg
    17101 cccaggccgc gaccgaccgc ggcgccctgc tgacccgcca gctgctggcc ttcagcaccg
    17161 gccagaccct gatccgcgag cccttggaca tgaacgcgct ggtccggcag tggttgccgg
    17221 atctgcagcg tgcctgccca cccacggtga ccctggatgc acgcctcaca ccgggcctgc
    17281 cgccggtcag caccgatgcg ctgcagctgc agaccgcgct ggccaacctg gtcgccaatg
    17341 cggtggaagc caccgtggat ggcggccgca tcctgatcgg cacggcactg gaacatcgcc
    17401 tcgaccctga tgcggacacc acgctgcaac gcggttatgt caccctcagc gtctgcgatg
    17461 aaggccacgg catggccgcc gacatcgccg agcgggcgac tgagccgttc ttcaccacca
    17521 aggacatcgg caagggcagc ggcctgggcc tgagccaggt gttcggattc actacccaga
    17581 gcggcggctt cgtcgacgtg tccaccaccc ccggtgttgg caccacggtc agcctgctgc
    17641 tccccgcaac agaggaagca cccgatgacc gatgacccga tccgcgtact gatggtggag
    17701 gaccagaccg atcttcgcga gatgatcggc ctggccctgc gcgacttcgg catcgaggtg
    17761 gccaccaccg ccgatggcca cgaggccgcg gagctgctca agggcgaagc gcgcttcgat
    17821 gtggtgttca gcgacgtcag catgcccaac ggcatgtccg gtatcgagct gagcgagcac
    17881 gtggcgcgcg aacagccgca ggcacggatg atcctctcat ccggctacgc gcgctcgcag
    17941 cttccgccgc tgccggagaa ggtcgagttc ctgcccaagc cctaccgtct gcgccagctg
    18001 gtgcagctgc tgaagcaggg ttgagaatcc gccgggcttg gcccggcgta tccgttgctg
    18061 tagcgccgag tccatgctcg gcagcggtgc tcagtaacgc cccaccaggt tcaggtacca
    18121 cccgcgatgg gtgtagtcga acctggtcag gtcatcgctg aaatcggtga agttgtagcc
    18181 cacgccgacg cggaaattac gcccgacatc gcggtcgaca ccggccagcc agccctgccg
    18241 gctgccgccg tcacgcacat ccagcaggcg gtactcgagc agcccatgcc actggtagta
    18301 caggtcgtag cgcagctggc cggaggcgaa gttggtggcc gagtcgaacc acggaccggt
    18361 accgcgccca tagcgcactt cgccttcgcg gcgggccgcc ttcgccgcca cttcccagcg
    18421 ctggtcgatg cgatacacgc cctcaagtga cagcacctgg gtgcgctggt cgtagtcgac
    18481 accattgacc tgccccatcg tcgacaggtc atacaggtag ctgtaacggc cgaacagtgc
    18541 ccagcgatcg ttgtcccacg ggcgataggc gaagccgagg ttgccctcga tgaagcgcgc
    18601 gcccgccacc ggattgatcg catcatcggt gtcggcgtag ttgaagcgcg ccgcgatccg
    18661 ccagctgtcg ttgaggcgat ggctcagccg gttggtgctg acccactgcg tgcgccgctc
    18721 cgcgcccgtg tcgcggcgcc actccagctt gctctgccat tcggtgcccg gcgaggtccg
    18781 cccgccggac aggctcaccg ccttgcgatc gacctgcccg gtgctggcgt cgagcttgcc
    18841 attgctcagc gtgaagccgg cattccagcc caccgccgga tagaaatcca tgccgaaggt
    18901 gtgcgccaac ccggactcct gcccggattt gaggaactgg ctttcgttga acacattgac
    18961 ctggtcggac aaccgccagc gctggcccag cgtccagcca tcctgcgcgt tggggctgaa
    19021 cagcgggtcg tactcgctgc ggtcggtcga ctgggtgaat gcaccataga agctgtgctg
    19081 cggggtcaac cggtactcgg cattgacctg cgcggccgtg ccgcggtcgc catcactgac
    19141 ttcggcgccg acggtcgaca gattggcgaa ggtccaggtg ccgccggcca ccaccgcatc
    19201 gttgtcggca tagcggccat ggtcgtcgtc cacggtcagc tggccgccac cgtacacatc
    19261 cagcgacgtg ccgatgcggt gggtgtagcg tgctgcagcc agcacgccgg ccacgttgct
    19321 gccactgccg cgatcctcct gcacccggcg cagctcggcc gacaggcgat cgttctcgcc
    19381 gatccgccat tcggcggtgg cctgtgcctg gatcagcgat tgcgcaccac gacgtgcctc
    19441 gctgtagcgt gcgtacaggc tgaagtcgtc ggtcacataa ccgagcagct cggcgccctg
    19501 ttcgcgcacc cgctgaccgg tatcgaagcg cccgaccgaa tagccaccgt ccacctgccg
    19561 ccaccaggca cccgcgctcc agtcgcgctg ggtccagccc agctcacgca ggttgacgcg
    19621 tgcctcgacg gcagtcgcct cgccttcgcg cggcccttcc ggattcaggc ggctgaagct
    19681 gaggccgcca ttgtcggaga agaacaccgg tgcgctggtc gcctcgctgc ggctgtgttc
    19741 gaccttcaga taggtgccac ggccggcctg caacgtcagg tccgcgcctt tcagcgaata
    19801 gtcctggccg gcgcgctgct cgtccacata ggtggcaccc accgcgacat gatcgccaaa
    19861 ccagtgcttg ccacgcacgc ccgcggtgat gtcatcgctg tcgaacccgg tcggcaccca
    19921 ctcgtaatcc acgatcaggc gctgttcgta accatccagc ggcacatcac ggctgatccg
    19981 gcgcaggttc tcgcggctga cctgcgccaa tggccgggtc agcaggatgc ggccctgcag
    20041 ggcgtcgatc tcgtagtcgg caccgcgcac catcggtaca cgctgctcca cgcgcccggt
    20101 ggtgcggtca cggatttcca gcaccacctg gtccgagcca ctgaggatgc tggcgtggcg
    20161 caggtagtac aggctgccac cggtaccgat gaactcgctg tggccgggcg cggtctcggc
    20221 ctgcgagccg aacaggcgca gctcgctgcg cgcgtcgccc caggcgttgg caccgcgcga
    20281 gcgccacgac aacgccgcac cgtacagcga acgcacgtac tgcgcatatt cggtgccggt
    20341 cagcccggtg ttgtagttgc cccacaacgc ctggttcttg tcccagtcca tgcgcaggta
    20401 gaagcgcccc atgctgtcga catcgcgctg ggtcagcgaa tcatcgccgt aggtcgggta
    20461 atacaggtca ggatcgaggc tgcggaacag gtcgcgcgga tcggcggtgg taaagccggt
    20521 gaacagctcg tccagcgggc gattctgggt gtcggcctgc gcggtcagca ggtagcggcc
    20581 acgggtcttg gccttcaggt agaaggccag gcgcccatca ctgagcacat catcgttgcg
    20641 ctcgccacgt gccaggtcct gccctgcccc gctggccttg ttctggtaca cggtgatgtc
    20701 ggccaggccg acaccgaaca ggtactggcc actgacatcg acctgcagcg tgcgcgcgat
    20761 ggccggtgca tccggccgct cgacacgcac atcgaaggca tggtggccga tcggcatcag
    20821 gtactcggcg gcgaacttgc gatcctggtc cagtggatag ctgtcgccgt tgatcttcaa
    20881 cgaggcaccc agcggcaggt cgcggccacg caggcgcacc cgcgagccgt acaccggaat
    20941 gttctgctgg cgcaggccgt tgctgtcgaa cacctgctgc agcagcgaca gtgatgccgc
    21001 ttgattggca tcgacagcgg tgccgcggcg atcttccagc gcatcgcgca gctgctggtt
    21061 gccccgctcg aattccgccg gagtgaccag ctgcatcgac tgcgcggtgg tttcatcgac
    21121 attgccttcg gcgtcgaagg cacgcagcac gtagaccagg cggtcgccgc gacgcagcgg
    21181 tgtcgatgcc ggcagggtgc catcccaggt gccctgtgca acggcggcca ccggcagttc
    21241 gaacgttgcc agcggcgcca cccggtcaga gtcgctgccg cggtagacac tgacttccag
    21301 gcgctggatg aaggcggtgt agttgccgcg cacgtagaac tcgaccggac gcacgatgcg
    21361 cccctcgtcg aaggccacca tgcccggcgc tgacaccgac agctccggtt ggcccatcgc
    21421 ggggtcttcg gtggcccaga tcgcgccgcc ttccggcagg cggatcatga actcgccacg
    21481 cacggtcgcc ttgcccggct catcgatggc cacgctgacc cggcgatccg gctgcaacgc
    21541 ctgcgagctg gaacgcgtgg atgttccttc ggtcaccggc tcgtcgtagc tgcgcgagcg
    21601 caggctgaac aacagttctc cctcggcatt gcactgggtg ccatcacacc ggatcggcgc
    21661 cggctcggcg gcgggcgggg cggcctgggc ggtagcggcc aagcccagca gcagcgcctg
    21721 gtacagcgcg gcacgtggca ggcgagccgc acgacgggcg gcagagtgat gcgcgctcat
    21781 cggcgggcct cctgttggcg ggcggccgca cgggtagcgg cgctctcctc gttgcggacg
    21841 cgcaggcgct gctgcacggc ggggctgagc tggctgcgca gcgcctcgaa cacggcgctg
    21901 gcacggcgca ggcccagtgc ctggttgtag gcatggctgc cgcgcacatc ggtgtgcccg
    21961 accaggctga cctggccacc gcccatcttc tccaggcgcg cggcgatggc cgccagcaac
    22021 ggcttgaact cctcgcgcac ggtggccttg tcagtgtcga acaggacgtt gcccagcaac
    22081 gcgccattcg catcgacacc ggccagcagc gaatgcgggt cctgcacatc ggtgcgcagc
    22141 tgcacggtca ggccagcgcg cgcgctttcg gccacttcgg cctgcagcgc atcgcgcacc
    22201 actgcggcac gggcgaaggc cagcgcctgg ctttcgccat tggccgcgat caccacgtca
    22261 ccgccctggt agcggttcac cacctcggcc atcttcacca gcaccgggcg gtagtcggca
    22321 cgcagttcac tgctgcccgg ggcaaacagc acttcgccca gagccagctc catgcgctcg
    22381 gccggcgcct gtggcgacgg cggcaggcgc acgccgaagc tgaagcgcgt cggcacgcct
    22441 tgggtcaccc gtcgcagcag cggattttcg gtcgtcagct ccgcaccggc cggcaccgtg
    22501 gcccggtcca gcttgatgat gaagttgcgg cccaggcgcg catcaccgcc gtggacgtcg
    22561 gcaaggtggt agcggccgaa cggatcggtc tccaccaaca ggccctccac cgtggccagg
    22621 cgcacgcccg ggatgccctg ctcctggatg ccctcgttgc cgatcacata ggccacttca
    22681 tagccctcgg aaacgcgcgc gatctcgcgg cgcacggtcg gctcggcggc ggtcaggccc
    22741 ttgccggcct caccactgcg ctgcacgtcc gtatcgccct gtgcgtccat ccgcaggcgg
    22801 tgaccctgcg cgctttccag cacgaagtca tcggtgaaag ccagttcgcg caagcgctgc
    22861 cgcaccacca cctggtgtgc ctcggcgccg tcggacgtcg acgcgcggcc gtgcaccgtg
    22921 ccgatctgca cgccgtgcag cagcggtgcg ctggcatcgg ccagcggttg cgggccatcg
    22981 ccccgatcca gcgtggtcga gccggccaca taggccgagg gcgcgaagcc accctgcacg
    23041 cgcacaccag tcagttcggc actgtcctgc cagccgtcac catcgcggtc atcgaacacg
    23101 gtaccgaaca ccaggctgtc ttccagcagc gggtcggcat ccatcgccac ttcggcggtg
    23161 gcgatgttcg acagcgggct gccatcatcg gccgtcgcca cggcctggtt cacgtgattg
    23221 ccactgcgta cgccagcgcc gacgcgcagc aggtaggtga tggtcgcact gcggccgacc
    23281 gcgatatcca ccgcgccgat gcgcagcggc gactggctgc tggccagcga gaacgcgccg
    23341 tcatcgtcgg ccacgcgcat cgaaccgtcc acgtagctga agcccggcgg cggcgtatcg
    23401 accaccacgc catcgcgcca gtggctgcta cccacgttct cgaccaccaa ctggtagcgc
    23461 accagatcgc ccaccttcac ccggcgcggg ctcgcggtct tggtgatgcg cagcgcgaag
    23521 tcggacacca ccttgtggcg cgtctcgcag gtcgtgcact cgggcggcgg cgagccatcc
    23581 gggtactgcc cgcgcaggcg gttcagtact tcggtacgcg cttcctgatt gacgatcgcc
    23641 tggtagaccc attcatggcg gccaaccgcg gttcccgccg gcagcgtgca cacgatgtcc
    23701 gttgcctgct gcacgcatcc ggcgggcagg ctctcgatgc tcagtccggc atcgggcgtg
    23761 tccaccagct gcagcggctt gcgcagggac gcgcgctcga ccgtggcgac cagggtatag
    23821 cgcagcctgt cgccaggacg cacctcggtg ccactggccg ggccggcctg cttctccagc
    23881 acgacgcgcg gttctgcaag cgcgtgctcg gtgctgcagt cgccgctgca ggtgggcgtg
    23941 tcaccgccgc tgcccagtac tgcattgcgc acactgccac tggcctgtgc attgaccagc
    24001 gcgcgatagc ccagcgtgta ggtgcccggc gcggtgccgg ccggcagcga gcagaccagc
    24061 ggattgctgg cgttgcaggt gaacggtccc ggctgggtga ccgactgcag gtccaggccc
    24121 acgcccagcg tatcggtcag caccagcgta tcgatggtct gcgaattcgc gacggtcact
    24181 tcaacgctgt agtccaccgc atcgccgacg ccaaccggtg cgacagtgga ggactgcttg
    24241 cggtaggtca ccaccgctgc cagcaccggt gtggtggtgc tgcagttgct ggtgcaggtg
    24301 gtggtaccgg gaccaccacc cagcaccgcg ttgctcacgc tgcccttggc ctgcgcgttc
    24361 accttcgcgg tgtagtccac cgtgtacgta cccggcgcag tcccggccgg cagcgtgcac
    24421 accagcgggt tggcggcatt gcagctgaag ccctggctgg cagtcaccgc gccgaagtcc
    24481 aggccggggc ccatcgtatc ggtcagggtg aacaccgccg tggtgcgcga gtggctgacc
    24541 acggcggtca gggtgtaggc gatgctgtca ccgaccttga ccggacctgc cgctgccgag
    24601 gttttgcgat agtcgatctg gctgccggtg accggcgtgc tggtatcgca gttggcggta
    24661 caggacggat tgtcgccgcc gctgcccagc acggcattgg tgacctggcc gctggcctgc
    24721 gcgttcacca ccgcggtgta ggacaggctg tagctgcccg gcacggtccc cgcaggcagg
    24781 gtgcagacca gcggattggc cgcgttgcag ctgtaggcgc ccgcactggt cacagcgcca
    24841 aagtccaggc ccgtacccag ggtgtcggtc agggtcacca catcggtggt gcgcgagttg
    24901 gtcaccaccg tggtcagcgt ataggtcagg cgatcgccca ccgagaccgg gccggtgccg
    24961 ctcaccgact tggcatagct cacgccgggt gccgccaccg gggtggtggt gtcacagttg
    25021 gcactgcacg acggattgtc ggtgccgctg ccaagcacgg cattgcggac actgacgctg
    25081 gcctgcgcgt tgacggtggc gcggtaggtc aggctgtaag tgcccggcac ggtgccggcc
    25141 ggcaacgtgc acaccagtgg ctgggtgcca ttgcaggtga agatgccggc actgctgacg
    25201 ccgccgaagt ccagaccact gcccagggta tcggtcaggg tgaccacgcc ggtggtgcgc
    25261 gcacgcgtga cggtcgcact cagcgtgtag tcgatgacgt cgccgatccg caccggacca
    25321 ccggtggacg cctgcttggc atacaccacc agcgcgctgg ccatcggcgt ggtggtatcg
    25381 cagctgccca cgcaggacgg attgtcggtg ccgctgggca ccaccgcgtt gcgcacctgg
    25441 ccgctggcct gtgcattgac gatgccggta taggagaacg catagctgcc cggaacggtg
    25501 cccgccggca gcgtgcagac caggggattg cccggtgcgc agctgaaagc gcctgcgttg
    25561 gtgatgccac cgaaatccaa accggtaccc agcgtgtcgg tcagcgtggt caccgcgcgg
    25621 gtgcgcgcgt cggccaccac gaccgtcacg gtataggcca ccgcatcacc gatcgcgacc
    25681 gggccggcgg tgctactggc cttggacacc gagatcctcg gcgcggccac gggcgtagtg
    25741 gtggtgcagt tgctgctgca ggtggggtta tcggtgccag tgccgaccac ggtgttgacc
    25801 acctggccgc tggcctgcgc attgacggtg gccgtgtagc tcaggctgta ggtgccgggc
    25861 acggtgccgg ccggcagcgt gcacaccaga ggattggccg cgttgcaggt aaatgcaccg
    25921 gcgttgctga cactggcgaa atccaggccg gtgcccaggg tatcggtcag cgtcaacagg
    25981 tcgcgggtgt tgccatcggc cacggtgaca tcgacggtgt agctcaccgt cgtgcccacc
    26041 gcgaccgggc cggccgtgtt ggagcgcttg gcatagccca cgcgggtcac cggcacggtc
    26101 acgtcgctgc gcgtgcagtg gtcggcatcg gtgcagctgg cgcccggtgc gggcgcattg
    26161 ccgctgttga aggggtcgta gccaccgccg acactggcgt gattggtcaa cacgccggtc
    26221 gccgctgcag tgacggtcac cggcagggtg aacaccgaac tggacccagc gctgcctgcc
    26281 gctgcaagga cctgcgtgct ggtgcaggtg acgtcctggc cgctggcggt gcagctccag
    26341 ttgccactga catgcgtgcc gctccagttc ggcgcgatgc cggccggcag ctggtcacgc
    26401 acggtgatcg tgcccgccgc cacattcggc ggattgccgg tcggcacatc gctggtgttg
    26461 ctcaccgtca gcgtgtactc agtgccggcc tggccataat tccagatgcc gccggtggca
    26521 ttgttgctct tcaccacctt cagcgacggc gcggtgatgg tgatccggtg gtcctcaacc
    26581 tcgccgtcgt cggccacgcc ggtcgggttc tggatctgga ccgcgttggt ggagtagcgc
    26641 aggcgcacgt aactggtacc cgccagtacc tgggcgggca cggtccaggt caggttcgcc
    26701 tggccaccac tacaggccgc aataccgctg cgctcgttgg catcgaacac gccattgcgg
    26761 ttgaagtcga tccagccggc cacgctgcca ttgcccacgc aggcgaccgg ttggttgatc
    26821 tgggtaccgg cctgcatcac cgtcaggcgg tagctggtcg gccaggcatc ctcttcgcgg
    26881 cttcccacct gcgggaagtt gtcatcgccc agcgcatcca ggctgtagct gctgcgctgc
    26941 tcggtatccg ggccgaggct gccgaggaag tcggtcaacg gcggcgccag accgcccggc
    27001 gtgtagcctg cggtgttgat gttgaagttg ctggctccct gcgggatgcc gtcggaacgg
    27061 aactgcagat cgtccaccac gtgcatggca tcgccatagc tctgcggcgc gtcgccgaag
    27121 tcggcgtagg gcaccagcag gccgatcgcg atcgcggtgg tgccgccgcc gcgcatcgag
    27181 aagcccatgt tcactgccag gttgcccggc gcgtgtgcgg cgttgtcaaa actgaggaag
    27241 gtgaccgcgg ccgtgttgtc gtcgttgccg gggccgaagc ggatgacctg attggcaccg
    27301 ctggtcgact tgttgaccag gtatggcgtg gcgttggaca ggttcttgcg gacctcgacc
    27361 acgttccacg tgccctgcgc gctggcctcg acgaattcgc cgctgttgtt gatcgactcg
    27421 gcgtcggcca tcaccacgcc gcgcaggcga tacggggcgc cgcccagggt cgacgtacag
    27481 gtgatgctga aggtggaggt gccgctggca cgtgcgatac cggcgatcag ctggttgctg
    27541 gtgccagtgc cgccgatgtt gtagaggtcg tcaaggctgt cgccaccgaa gttgccggga
    27601 cgatagctgc gcagcacatt ggtctcggcc gtattcaacc ggcaatcgac gcgcaggttc
    27661 accccggccg cgaccggcat gtcgatggac gacatcgcgc catcgttgag cgcgacgttg
    27721 ttcacgccat tggcaccgcc accccaggtc aaccacagca cggtgttgcg gtacgggctg
    27781 ctgccgccag tggcgtaggc ggcggcccag gccagcgacg gcatcgtcag cgacaacagg
    27841 gccagcaggc cggccctcag ccatccgctg gatcgccctg cccgggcacg ttttttggga
    27901 tgaacgcatc caccgcccgc gctttcgcgc gacgtcgtcg actgccacat ggttgatttc
    27961 cccgtcgtcg acccttgccg ggccgaaggt cagtgggtga ccagcaacga attccccggt
    28021 acggcggtac acatgactgc gtgttccgcc gggtccgtgg cgatcagctt cgtcccttgt
    28081 ccccggttgg tcaggcacat ataactgtga cgaccataac atattgcaaa caattatgtg
    28141 atgaagatca cattcacatt tgcagagtct ggcgtcagct ccacgcgtcc agttatagcg
    28201 ggcacacagg ttggggccgg gcacgattcc ggcagccgcc gcctactttc cggcaaaaca
    28261 gcacgcagat tcggcagcgg tgtggggcgt cagggctgct tcgcgccctg caggaaggac
    28321 gccagcagcg tcgacgctgc catcgccggc gccaaccggc cccgtgccag cgaccaggtg
    28381 atgccgtaga agcaggtcca gtagaagtcg cccagccaca cggcggtgaa tccgagattg
    28441 aacacgccgg ctttctggcc gcgcaggaaa aaagcctcga aacgctcgcc aatcggcgcc
    28501 cagcgcccgg gcagcagatg cagatcgccc tgacgctgct gctcttccat catgcgcgcg
    28561 aacagcagcg tcaccagctc ccaatcggcc agcaacacct cggtcacgcg ttccagcacc
    28621 tgcatcgcgt cggcatccgc gtcgaaccag gtggccgccg cctccagccg ttcaaacccc
    28681 gccgcaaaca atgcctcgtt gatcgcttcg cgggtgggcg cgaaccggta cagcgtcgcc
    28741 cggctgatac cggcaccgct ggccagttcg ctgagcgtgc agcgcgggtg gctgaccagc
    28801 gtggctgcga gggcatggtg caggtcgcgg cgggaacgtg cggcaggacg catggaagta
    28861 ccggattcgg gatgccctca cgctagcatg aatcatcaat taatgaactg aatcaaagat
    28921 gattcatcag aatcacgatt gagctacaac tgcagtgcgt ccggtgcacc cgggtcggtg
    28981 cacgcaggga tcgcgtcaca ggcatcgaag gagacaacgc catgctgcat ccgctacgcg
    29041 acattgccgt gctgttcgat gccagcgaca ccgggcaccg ggtcctgaac atcgccgccc
    29101 ggctggcgca ggtccagcag tcccacctga tcgcggtctc caccgcccag caccccaccg
    29161 acatcgccag cggcttcgcc cggggtgccg gcattgccgc tgcactcgac catgaagcac
    29221 gtgccgatgc cgcctgcacc gcgcagctga tgcagaacct gcgcgcggcc gccgagccgc
    29281 tgcggatcag caccgagctg cgcatcgttt cggactatct gggcggcgct gatctgtccc
    29341 tgcactcgct gtactgcgac ctgatcgtcg ccggctatcc acacacgccg ggtgcgccca
    29401 gcggctggca cccgctcggc acgctgcgcc agaccggcgt gccgatgctg ctggtgccgc
    29461 cgcactggcg cggcgaacag gttggccagc gcatcgtggt cgcctggaat gccagcaagc
    29521 aggcacgccg cgcggtggcc gatgcgcttc ccctgctcgc ccgcgcgcag gccgtgcacc
    29581 tgctgatggt cgacaccccc aaggcggagg ccgcaccggg cgccgaaatg gcccagcacc
    29641 tggcccggca tggtgtcgag gtcgagatcc aggcggtcaa ttccacacag ggcggcgttg
    29701 ccgcaaccat ccgacagcat gtcctcgatg ccgaagcgga cctgctggtg ctgggcccct
    29761 acagccgcag ccgggtggtg gaacgcgtgc tcggcggagt caccgagaac ctgctggccg
    29821 aagttccggc accgctgttc gtatcccact agcgaggccc tgccccgcgc ggcggtaggc
    29881 ggtcaacgat tgcccggtat gccgccggaa atagcggcac aggtaggacg catcctcgaa
    29941 gcacaggcgc tcggcaatgc gtccgatcgg cagttcgctg tagctcagcc atgccttgat
    30001 ctccagcacc gcctggcggt cgatcagcgc cttcggcgat tggccgaagc actcgcgggt
    30061 cagctgtgac agatagaacg gggtgatgca cagcgcctcg gcgtaggact gcacgtcacg
    30121 ctggcgcgtg ctgcgctggc cgaccagctc ccagaagttc caggccaggc gctcacgccg
    30181 gctgatctgc gccgtgggcg cgcccttcgc cggcagcagc gtggcgaatt tgagaaagaa
    30241 ggtctgcagc agagtgcgca gcatcacatg ccggtaccgg cctcccgtgt gctgtgcgtc
    30301 catcaattgt tgcagccacc cctgcagcaa cggcacctcc agcggtgacg gcgtgcaatg
    30361 aggctgctga tgcagaaact tgaacagcgc gttgggcagc acatagccca cttcggatgc
    30421 cagcgccttc ggcatcaggc agaccaccgc caggaagccg cgcgagcgct gccgcaacag
    30481 cgccagcgtg tcctcggcca gcaccagcac gtcgtgccgc tgcactgcca cctcacggaa
    30541 gtcaagggcg aagcgcgcac gccccgacac gcagaccagc accgcgagac aggcgtgccc
    30601 gaacgacagc gggacgccct ggccctcggc cagcgtgctg acctccaggc gcgtggattc
    30661 gtcctgatcc agaagctggg gtatgcggtc catgagcgga tccggctgga ttccggagcc
    30721 gagcataccg ggcccagccc atctgttgtg aaaagtaccg aaggcatcaa ggcccgtcac
    30781 gcggcgcccg tcatccgcca ccgcgctgca tgaacagcaa gtcgggcgtc gaggcatcgt
    30841 ccacgggccg gaatccgagg tcgcgataca gcgccaccgc cgcgggattg tcccgataga
    30901 cccgcagggt caggcgctgt acgcccggag attgcagggc ctcggcgatc atcagctgca
    30961 tcagcacgcg ccccagcccg cgcccccgtg cctggggcga aacgatgatc cggcccagat
    31021 gggcggtgcc gggttcgctc aaccagtact ggccgaagcc tacgcagtcg ccctgcccgt
    31081 ccagcagcac ccgccccggg cgagtgccca gcccaagcac ctgcgcgaac gctccggccg
    31141 gcacagggaa tgcgacaccc gggccggccc agcgctgcgt ggctgcggcc gaatcgagcc
    31201 aacgggcgat gcgcgcgtag tgcgaaggct ggaccggctg cagctgcatg ggcatggcga
    31261 tacgtgcatg acgtggatgt ccattgtgcg tgctccagga cgcgccgtca caccgcagca
    31321 cagctcttga attttgtcct aggacaataa acaattccgg gcgtgcacac gcctgccgcc
    31381 caacggcagc ctgtctcttt ctcactcccg ggtatcccat gctcagaggc ctcagcgcgt
    31441 ttccgcttac tccgctcagt ggagatgaca tcgacacacg cgcttttgcc gcactggtcg
    31501 agcgcctggc cgcgtccggg gtggactcga tgggcattct tggctccacc ggcagctatg
    31561 cctatctgga gaaagccgag cgcaagcgcg tgctgcgcga ggccctcgcc catgccggcg
    31621 gcgtaccggt gatcgtcggc gtcggtgcgt tgcgcagccg cgacgtgctg gagctggcca
    31681 gggatgccga agatgccggc gctgccggcc tgctgctggc accggtgtcc taccagccgt
    31741 tgaaggaaca tgaggtctac acactcttcg aatcggtgag catggcagtg cacaccccga
    31801 tctgcgtgta cgacaatccc ggcaccaccc gcttccagtt ctccgatgaa ctgcatgggc
    31861 ggatcgccgc gctgcccaac atcggctcga tcaagatccc ccgcctctcc gacaatccgg
    31921 tggaagcggc agcaagggtc gcaatgttgc gcgcccacct tcctgcgcat gtcacgctgg
    31981 ggatcagtgg tgacgccgcc gccgtgcgcg gactggccgc gggctgcgat gcctggtatt
    32041 cggtagtcgc tggcttgttc cccgaggtag cgctgcggat cacccaggca gcgcgcagcg
    32101 gtgacatgcc caccgctgag gcggcatccg cgcggttggc accgctctgg gcgctgtacg
    32161 atcgcttcgg cggtatccgc gtgatggcat gcgctgccgc gctgatgggc ctgtgtagtg
    32221 acgactgcct gccgcggccg ctgcttgggc tgcagggcaa tgaccgggcg caggtggccg
    32281 aagtactgga aggcctgagg ctgcgctaga cgcagaaagc gagtgcgaaa gcagccgtgc
    32341 aggtggtcac gccggcccga ttcgaagggg cgacatcgct cttgagaaga ggcttgcatg
    32401 gctcagtacg atcatcctgc ggggcgcgcg tgaccggatc agaaccaacg gtcattttcc
    32461 agccatagca gggacccggg tagcggccag tggcacaata agcgtcgatg ccatggaggg
    32521 gagtccatgc gatacaaccc tgcgctggac ggcctgcggg ccgtcgctgt aatgatggtg
    32581 ctggccttcc atgcgcggtt gttcggtgga tttggcggct tcttcggcgt ggacgtcttc
    32641 ttcgtcctgt ccggctactt gatcacgcgc atcctcgccg agcagcacgc agcgacagga
    32701 tcgctgcgca ttggcacctt ctacgtgcgc cgcctgcgcc ggctctaccc agcccttcta
    32761 ctactgctgg ccgtttacct ggccgcggcg ccatgggtgt tcccggaaca tgccaaccac
    32821 ctgcgtgacg cagctgttgc aggcctgtat ctctcggact atggcttcgc cctctggcgg
    32881 gtgccgtggt acctgcagca cacctggagc ctgtccgttg aggaacactt ctacctggtg
    32941 tggccgatgg tgctgatggt ggtgttccgg ctgccaaggc actggtgggc acccgccgtt
    33001 ttcctcctgg caatcgcagc cacactctgg cgttggcacg tggcgctgaa cgacgacgcc
    33061 tggtatcagc cctactaccg gttcgacacc cggctgtcag ggatcctgct cggcgccgcg
    33121 gctggcctgt ggaacccgtc cctacccaag gcagctgctc caatgggtgc gctgctgctt
    33181 gggatcgccg tgacccaggc tcatgtgaag gaaatggcgg ccctcacatc atggatggcc
    33241 atggcagaga tcggcgcggc attgcttgtc ctgggggccc accacgtgcg tgccctttgc
    33301 tggaccccac tggcatgggt cggaaagctg tcctatggca tctacctctg gcatttccca
    33361 atcatgtatt ggctgcgcgg gcaggaaatt tcgggctgga gcagcatgct catcggatcc
    33421 ggggcggcag tcctctgcgc ggcggcgtcc tactacacga tcgaacgtat cagccgatca
    33481 ggccgggctc acaccgcaga aactgcgcgg gttgaccagg ctggcacgct cggccgcgat
    33541 gcaggcatcc gatagcgcgc tgcgcgcagg taaacgaggt ccattctgcc ggcgaatggt
    33601 tcaattctct ggatatgcgg gaggtcgtgg gaaatgacgt tgttctagca acttccaaac
    33661 cattgattca tggcagctcc gacccgattc gggcgggcga ccagggcatg attgccctag
    33721 acggcaagag gggagtgatg cccttcttgt tgtacttgca gttttacttg cagatcccgt
    33781 gccattttga aacggtagtt gtccgaagcg gtgagaattg tggtcgacgg cgcgacctca
    33841 cagtaccaat gccgaccggg cgaaggccga cattcgcagg ccagtttaca ggacataccc
    33901 tgagaccaat aattctgccg aagccgggca ttcctggctc acgctacgga gggctgtatg
    33961 gaactgagtg gatttctgct gatcctcggc atggccgccg agccggggaa cccggctgca
    34021 ccgaaagctc cggcaagtga ggaggtcact gcggcgattg cggaggcaac agaagcggct
    34081 gacaccttcg cggactgcgc aggatggtgg gatttcatgt cgacctggga aatgaaagcc
    34141 gggcgctccg catccgcaga gcagttcagg aacatgggca acggagcgca ggctgcggcg
    34201 ctgtggctgc atgcacaggc atacgcattg accgcaacca aaccggccag gtacagcgcg
    34261 tggttgccca tggttgcccc tcgacgttct gccgccgcga caagagctgc agccatggcc
    34321 gaacacggcg atatcgactt tgcccgtgcg gaaggtgagc gctgccgagc aatgcttgga
    34381 gcgcagcagc acgccataga cgacatccgc agggatgccg ttcaacgtga gctggatgct
    34441 tcgatgccga ccaagtgatc cgcacctgac tactacaggc aggatcgtcc ccgcgtgagc
    34501 ggggacacca ctttgcatct ccccaaggtc cctcgccatg tcctctgcag cgcagcctta
    34561 cccagcacta agctggcggc accggatgac ggtggtaggt cgctgctcca ttttgatagc
    34621 ggatggtgac cggattgata gcggatggtg accggaggat tgatgttcat ggcaccagca
    34681 tcacctgcat gatcccccat gtaggccgtc gaggttccag cgggcatgcg gacgcagatc
    34741 aagttgaacc ttggaccgct ctccttttcg gcttttatcg tcagaacctt gagcaccgta
    34801 tggcagtggg agcatgggaa ttcattcaat tcgattccaa ctgagctacc aaaagtcttc
    34861 gagctcttca gccccgtcca ccagcacgca agcagcttca tctccgcgtg actcttgcac
    34921 tggctggaaa cttctgcgcc tttggcattt ccataattga gattcagccc tttgaaaaga
    34981 gcggccgcat ctatcaattc atcagcacca gacacagtat ttttatgcgt gaacgtttca
    35041 tcgtatagcg ttgccactgt gctgtgctgg ctggccgaac caccaccctt gcccttgggg
    35101 ctcatcgcag catctcccat tccaggagac attcaaatac tcgatggaca ggcacgaatc
    35161 acgccaattc gtctcacgta tccagccgaa ggctcttaaa catcgctcgc aatcaggtcg
    35221 cgagccgatg ctcgtagatg ggtgccgctc gtcttcgaag attcaataga gcgcggccag
    35281 gacagtcggg ccccggttga aacaggtgtc gacatgcttc tgccttccgg aacgcgcacc
    35341 gtgcggccat agctgcgggc gttgacctga ccagagcccg ggttccagtc ccggcgatcg
    35401 aacaagaaca gcaccggacc gtcgaaccac tgcaactctt tgattctgga gaccccggcc
    35461 cgattcgaac gggcgacctt ttaggagggg gattgcatgc ccttctaatt caatgacttg
    35521 cggatcaact gcgaccacgc tgcgcccaag cggtccttcg ggcggggttt cgtagccggc
    35581 ggcttggtgg gctctcgcgc gtccttgatg cactgcagct ctccccgcct cgatcaaacg
    35641 cctccctgct cggcaactga aaccggctgt tagacttcgc gaaccctcgg acggaaagct
    35701 ccatggaacg gtggtatctg gcaacactcg tggcattgat cctgcaccag attgacgccg
    35761 cgttctggca cgaatgggac atgttccgcg tccccggtgg catccaaggt ttccttgtct
    35821 tcaacctagt cgctgtcggc gccctgctgc acgggtatcg ccaagtcgcg ctggccaagc
    35881 cgtccgcgcg agcttatgcc cgcctgtgcg ggatagtagg tgccggcaca gcagcaatcc
    35941 acttcgcatt tgccgctgct ggccgtgagg aattccatct ccctctgtcc atcgcggctc
    36001 tagccgcatg cctcattgcc ggcgtcggcc tgctgctaag cagccagaaa ccggccactg
    36061 gtcagtagcc gcggcctagc ttggcgcccc ctgcccctgc ccccacccac atcttcatcg
    36121 gatccttcgc cccgggcttc gtggcggggg cggttggatc ggcgtgctgt cggtcaagcg
    36181 ggccatggcc tcacgaaggg gcagatctgg atagagcctg gccgcgcacc agcgctcgcc
    36241 gtaacgcttt gcctgccgga cgttggcggc ccgcacttcc ttgacgtccc ctgccttcca
    36301 tccatagccg gaccccgggc ccgccgtcga gcgtgacgct agccgtctcg cgcccgttgt
    36361 accagagcgc ccagcgctca ccgatctgga cccagccaga gggggtcggg gcggtgcgga
    36421 agccttggta gccgtgcgag ggaagcatgg ccggaaggat acgaccggcg gtcgcagatc
    36481 ctgcgaacgc agcagcgctc tgcctgaatc gtttggcgaa ggaaccgtta aggcctgcat
    36541 cggcgatttg acgagatcgc ccatctgccc gaatcggaga gtcgagcctg actcgactct
    36601 atgccggcgc agcaaagttt gcttgctgta ggaaattacc tacaagagga gtgatccttt
    36661 acctattgca gcaaccgatt gaatgttgcg accgtcgaga tagcatgctt gctcatctac
    36721 cgactggcgc gtaatggaga acccgatgcc aaatccatcc ctaaagtaca gctttgtcta
    36781 tcagtgcttg cgcctgtcaa agttcgcact catcgcctgc atggtcacct catgctcaga
    36841 taagaatgat gatgttcaac aggtgagcgg tacaccgaag aatgaagcac ccgccgctac
    36901 tgcagagctt cgaggtatct ctccaaagcc aacagcaatc gataccaatc tccaatctgc
    36961 acagcgccta ccagatgctc ccgtgaaaga tctgtatccg gcgctccgca atagagcaga
    37021 agctggagat ctggaagcaa aacgacagct gttcttgtta ctcaacgagt gccgcgttgc
    37081 aatgcagtca gacaggcaac ttgactactc cgatagtcaa gtctctccag aaattctcaa
    37141 agccagtggg aagacacgag agcaatactt ggccgatcaa aaaatgagta ccctcgcttt
    37201 caccgaagag aagctcaagc aatgtgaggg catcccaggc gatgcactaa aggaaacgtc
    37261 ccgatggctg aaggaggctg cgcaaggggg cgactcctac gcgcggctgg cctactacaa
    37321 ctacatggat atcatcgttg gagatcagca ggaacaagca gcatcggccg aaaaagttaa
    37381 gcagttcaat gacgactcat atcgctatat caaaagtgta gccgacaccg gcaacccgga
    37441 tgggctcttc actctgggaa ctgcgtatca gcgcggcatc attacgccga aggacccgat
    37501 ccttgcctac gcctacaaaa aggctgctgg agagctgact cccatcggtg gaaacgagca
    37561 gatgctggac ctcatggcac agtccatgac tccgactgat ctaaggaagg ccaatcaact
    37621 ggccgctacg ctggcacaga ggagcaagag atgaaaatca ggcttacggc agcattcctg
    37681 ttggtctttc tgctaggagt agcggtttac gtgcatgccc aagtgcgagg aactagaaac
    37741 atcgggactt atccctgtaa taactgcgca ctgggctatc cgagaatcga cccacacacc
    37801 tcaaatgagc ttactctcgc catagcgagt ttcaacagac ttgttgctct tgagtctctg
    37861 tcgatagccc ccggtgacgt cataacaatg tgtaacggaa ctgcttgtgt tggctatgaa
    37921 gttacgttgg gcggagatgg atacatggga gtcaagtatg aagcccaagc cagtactact
    37981 cctttgaatc ctagcggaaa tgctaatggc accggctcag gaactggcca tggaagcggt
    38041 caaggcgtcg ggaatccggg cggcgccaat ccaggcagtg gttgctatgg cagttgtggc
    38101 ggaggacaaa ccggcacagt gacagccggc cctgactcac cgctcccgaa actccctaag
    38161 ggctcacaag agctctagcg tccgaaagcc ctcccgaccg agccccagcg ggcggtgacc
    38221 catccaccgc ccgccgacgg ctacgtggcc ccaccatccc ccagcggcgc tgtaaccacc
    38281 gctgcgggcg aggtcgccgc cttccagatc gccttgtact gatacagact ctgcgccagg
    38341 tgccagcgcg ccagcagtgc cgcgtgtgcc tcatgcggcg gcctggccca tgtccgcgct
    38401 gacctgaatc atgttcgttg cggtcagggt tccgacggtc aaacgcgcgc cgtcaaagcc
    38461 aatgccattg atccttcccg tgctggtgta tgccacggaa gggtgggcca tcgtgtccgt
    38521 attgaccttc attgcaggcg tagtggtgac gggcctcatc acggacagcg atgggctgac
    38581 cgcgctgccc ggccggcgcc atcgggcgac accactctgt ggggtcggaa tgaccctagg
    38641 gtgcttcgaa gtccaggccc ggccgcccgc cctggcaggc tgggcatttg cgcaggtgta
    38701 tgtcgctacc attcgcgcca taggtctccc cgcagggctt gcagtgcagg acatagatgg
    38761 actgcccgtg gtccgtgcca gggaggccgg tggcgcggat gttctcctgc ttgttccggt
    38821 tgatgaagcc gatcttggtg gtgcctttgt cgaccctagc catggattcg ctccctgaga
    38881 tctgccggca gtgtagtcgt acacgcaacg cccacgagtg gcggctgggc gcttcgccgc
    38941 ctacccgatc cgctggtggc cgtgcacagg gacacgctct ccgattggtt cacctcggat
    39001 gccaagcgtg cgggaatcgg tggcagcctc caccggctac ggcacacctt ctgcgcccac
    39061 atggtgatcg ccggggttcc gttgcgaagg gtgcagattc tggccgggca cgctgattac
    39121 gccacgactg agaagttcta cgcccaccta acgcctgaag gcgacgatgg cgcagtcgcg
    39181 aagctcaagt actgagcggg accattggga ccactgggac caaatcctgt ggatatgcgg
    39241 gaaacagtgg gaattgctca ccactgagcc cgcctaagct attgattctg gtgaccccgg
    39301 cccgattcga acgggcgacc ttccccttag gagggggacg ctctatccag ctgagctacg
    39361 gggccatgca gccgggaagt ttacaggcaa cacaccctgc cctccaagca ttcatgttcc
    39421 aacccggctg cgctggcgcg ttgcaccatg gccctacggg ccgctctgct accatcggcg
    39481 attcagttca tcgcgccccc cacctgcccg cgatggcacc aaacaacgta acgaaacaca
    39541 ggagtctgca tgtcttccga gctgctcaag tcccttggcc tggacgcgat caacgctggc
    39601 acgtacctgg gcaacgggga gtggtcgagc gcgaccagcg gtgagctgat caccccggtc
    39661 aacccgacca ccggcgagcc gatcgcgcag gtccgcgcca ccaccgaggc cgagtacgac
    39721 accgtcgtcg cccgtgccca ggaagccttc aaggtctggc gcaccacccc ggccccgcgc
    39781 cgcggcgaag ccgtgcgcct gtgcggcgaa gcgctgcgca agcacaagga tgccctcggt
    39841 tcgctggtgg ccctggaaat gggcaagagc aagcgggaag gcgatggcga agtgcaggag
    39901 atgatcgaca tcgccgattt cgccgtcggc cagagccgca tgctgtacgg ctacaccatg
    39961 cattccgagc gccccggcca ccgcatgtac gagcagtacc acccgctggg cctggtcggc
    40021 atcatctcgg ccttcaactt cccggttgca gtgtggagct ggaattcgtt cctggccgcc
    40081 atctgtggcg acgtgtgcat ctggaagccg tccaacaaga cgccgctgac cgccatcgcc
    40141 tcgctaaaga tctgcaacga cgcgctgcgc gaagccggct tcccggacat cttcttcctg
    40201 atcaacgatg ccggtaccgc gctgtcggaa aagatggtcg atgaccgtcg cgtgccgctg
    40261 atcagcttca ccggctcgac ccaggtcggc cgcacggtca acgagaaggt ggcgcgccgc
    40321 cttggccgct gcctgctgga gctgggcggc aacaacgcca tcatcctgga cgaaaccgcc
    40381 gacctgaagc tggccgtgcc gggcatcgtg ttcggtgcgg tcggtaccgc cggccagcgc
    40441 tgcaccacta cccgccgcct gatcgtgcac cgctcgatct acgccgacgt gctggccacg
    40501 ctggtgaagg cctacaagca ggtggaaggc aagatcggcg acccgaccga cgccgccaac
    40561 ctgatgggcc cgctgaacag cgatggcgcc gtgcagcagt tcctcgatgc catcgcccag
    40621 gccaaggccg ccggcggcac catcgagacc ggcggcaccc gcatcgaccg cgccggcaac
    40681 ttcgtgctgc cggcgattgt ctcgggcctg aagaacagcg acgccgtggt ccagcatgag
    40741 accttcgcgc cgatcctgta cgtgatgccg tacgacagcc tcgacgaagc catcgacatg
    40801 cagaacggcg tgccgcaggg cctgtcgtcc tcgatcttca ccaccaacct caagaccgcc
    40861 gagaagttcc tgtcggccgc cggcagcgac tgcggcatcg ccaacatcaa catcggcacc
    40921 tccggtgcgg agatcggtgg cgccttcggt ggcgagaagg acaccggcgg tggccgcgag
    40981 tccggctcgg atgcgtggaa ggtctacatg cgccgccaga ccaacaccat caactattcg
    41041 gattcgctgc cgctggccca gggcatcaag ttcgacctgt gatggacaac gccgcaccca
    41101 cggcaccgga tcggatcccc agcggggctc cgatccttga ttacagcggc cgccgcgtgc
    41161 tgatcgctgg cggcagcaag ggcatcggcc gtgaaatggc gctggcgttt gccggcgccg
    41221 gtgcgcaggt ttcggtctgc gcccgcggcc agtccggcct ggacgtgctg cgcgccgatg
    41281 caaccgcaca gggcgtcgtg ctgcacgcgt tcgccgccga cctggctgac accggccaga
    41341 tccagggctg gctgcaggcc gccgccgacg cactcggtgg catcgacgtg ctggtcaaca
    41401 atgccaccgg ctacggcatg gccgacgacg aggacggatg ggcggccagc ctgcaggtcg
    41461 acctgatggc ggccgttcgt gcctcgcgcc tggccttgcc gtggctgcgc atatccgaag
    41521 acgcctgcat cctcaatctg tcttcgattg ccgcgcagca gccgcgcccc ggtggcgcgc
    41581 cctatgctgc ggccaaggct gcgctctcgc actacaccac ctcgcaggcg ttggcgctgg
    41641 ccaaggaccg gatccgggtc aatgccatcg cgcccggctc gatcgagttc gacgacggcc
    41701 tgtgggaccg ccgccgcagc gaagatcccg cgctgtacca cggcacgctg gcgaagatcc
    41761 cgttcggccg cttcggccac ccgcgcgaga tcgccgacgc tgcgctgttc ctgtgctcgc
    41821 cgctggcgcg ctgggtcacc ggcagcgtgc tcaacgtgga tggcggccag gtgctgatgg
    41881 gctgacgcac gccggcatcc cggtagctgc caaccttggt tggcatgcct ttcgtcgacc
    41941 aaggtcgacg cctacctggc tggaatgcct ttcgtcgacc aaggtcgact tctgccgtag
    42001 cggccaacct cggttggcac ccttgcattc accgggcatg ggattgcccg ggcagaggca
    42061 ctatcatgtg cacactgcca aggaggaccc cgatgagcgt ggcaccccga cagacaagcg
    42121 ccctggccgt ggtcagcctg gtcatgggca tcgccagctg gaccgtcctg cccttcgtgg
    42181 ccagcatcgt cgccatcgtc accggccaca tggcccgcgc cgaaatccgc cgccgcccgc
    42241 ttgaacttga aggtgacggc ctggccgtca ccggcctagt gctgggctgg gtgatggtcg
    42301 gtgcggtgat cgccgcgatc ctggtcttca tcctgttctt cggcggcctg gcctggctcg
    42361 ccgctgtatc gaactgaccg ccatgaccgc ctccgacagc actgaacgct tcagcagccg
    42421 cgtcgccgac tacgtccgct accggcccga ttacccgccc gcgctgctgc aatggctgca
    42481 cgacccgatg ggcgtcagcc atcaggcgca ggtggccgac atcggcgccg gcaccggcat
    42541 ttccagccgc ctgttcctgg ccaccggcca tccggtggtg gccgttgagc cgaatgcggc
    42601 catgcgcggc gccgccgaag catggctggc accgcagtat ccgcagttcc gtgcggtcga
    42661 cggccgcgcc gaagcaaccg gcctggacgc tgccagcatc gatctggtga gcgtcgcgca
    42721 ggccttccac tggttcgaca ccgtggcggt gcgcgccgag tggcagcgca tcctgcgccc
    42781 gggcggccag gcgctgatct actggaactc gcgcctgctc gacgccagcc cgttcctggt
    42841 cggctacgag cagctgctgc tggactacgg caccgactac agcgcggtgg ccgaacgcta
    42901 ccaggacgac gccaccatgc aggcctggtt cggtagtggg ctgcgcggca tggtgcagct
    42961 gccgaacgtg cagtacctgg acctggacgc cctgcgcggt cgcctgctgt cttcttccta
    43021 cgcaccgcaa cctggtcatc cgcgccacgc gccgatgatc gatgccctgc aggacctgtt
    43081 cgccgcccac gcggtcgacg gccaggtcgc ttttgaatat caaacccgag ccttcctcgg
    43141 cacgctggac tgaaccgacg catgtattcg cttgcccgcc ccttcctgtt ctcgctcgac
    43201 gccgagcgcg cccacggcct cggcctgtcc gcactggacc tggcctatcg caccggcacc
    43261 acgccgctgc tggccgcccg catcgcgccg atgccgagca ccgtgttcgg gctgaccttc
    43321 cccaatccgg ttggcctggc cgccggcctg gacaagaacg gcgagcacat cgatgcgctg
    43381 ttcgcgctcg gcttcggctt cgtcgagatc ggcaccatca ccccgcgccc gcaggccggc
    43441 aacccacagc cgcgcctgtt ccgcctgccg gaacacaacg cgatcatcaa ccgcatgggc
    43501 ttcaacaatg cgggcgtgga tgcgctggtg cgcaacgtcg agcgcgcgcg caaccgccgt
    43561 ggcctgctcg gcatcaacat cggcaagaac aaggacaccc ccaacgaaca ggccgtggat
    43621 gactacatcg cctgcctgga caaggtgtac ccgctggcgg actacatcac cgtcaacatc
    43681 tcctcgccca acaccgccgg cctgcgtgaa ctgcaggagg aaaccgcgct gcgccagctg
    43741 gtcagccagc tgcgcgaccg ccaggaggca ctggccgccc ggcacggccg ccgcgtgccg
    43801 atgctggtga aggtggcgcc ggacctgagc gagcgtgaca tcgatgccgc tgcgcgcgtg
    43861 ctgggcgaac tgaaggtgga cggcgtgatc gccaccaaca ccaccgtcga ccacagcaag
    43921 gtggccggcg acccgttggc caacgaagcc ggcggcctgt ccggcgcacc ggtgctggag
    43981 cagtccacgc tggtgctgcg ccgcctgcgc gcgcgcctgc ccgaatcggt gccgctggtc
    44041 ggtgtcggcg gcatcctgtc cggtgccgac gcggtggcca agatggccgc cggtgccgcg
    44101 ctggtgcagt gctacagcgg cctgatcttc cgtggccctg ccctggtctc cgagtgcgtg
    44161 gaggcgatcc gtcgccgccg cgaagcgccc agccgcggcg cggtggcgcc gctgtgagcg
    44221 cgcccatgga caccaccgac ggcgccgcac cgctgcgctg gacgctcacc cgcaatgcac
    44281 cgctgcaggc gctgaacacc ttccacgtgc aggccagcgc cgcacagctg ctggaactgc
    44341 acgaccccac attgttgccg gacgtgctgg cgctgcccga ggtgaccaac ggcccgctgc
    44401 tggtgctggg cagcggcagc aacgtgctga tcgccgaaga cctgcccggc accgtgctgg
    44461 tgttcggcaa ccgtgacatc agcttcctcg aacaccgcgc cgatcatgcg gtgatccgtg
    44521 ccggtgccgg cgtgccctgg cacggcctgg tgatgtggtc gctgcaggaa ggcctgtctg
    44581 gtctggagaa cctggcgctg attcccggca ctgccggtgc cgcgccgatc cagaacatcg
    44641 gcgcctatgg cgcgcaggtc ggcgaattca tccaggccgt cgaagcctgg gactgccacg
    44701 agcaggcctg ggtgcggctg gacaacgaac agtgcggctt cgcgtaccgc gacagcgtgt
    44761 tcaagcagca gatggaccgc tacctgatca ccgccatcga actgaagctg ccgctgctgc
    44821 atgacctgcg catggactac gccggcatcc gcgaggaact gcaggcgcag ggcgtggaac
    44881 tgcccggcgc ggtggacgtg gccaatgcgg tgatcgcgat ccgccgccgc aagctgccag
    44941 atcccgacgt gctcggcaac gccggcagct tcttcaagaa tccggtgttg ccgctggaac
    45001 aggtcgacgt actgctgcag catttcccgg atctgccggt gttcccgtcc gaccaggaag
    45061 gcaagcgcaa ggtctcggcc gcctggatga tcgagtcctg cggctggaag ggtttccgcg
    45121 agggcgatgc cggggtggca ccgagccatg cgctggtact ggtcaaccac ggcaacgcga
    45181 ccggcgccga actgctggcg ctggcacgcc gcatctcggc ctcggtgctg gagaagttcg
    45241 gcgtgccgat cgaaccggag ccccgcctgc tcggcgcaca gtggtgaaca cccccaccct
    45301 ctccccaggc gccaccccga tgcgggcggc gctgctgatg ctcggcagca cgatggcgtt
    45361 cggcctgatg gcagtggcga tccgctatgc cacccgctac gtgccaaccc aggaagtggc
    45421 gttcttccgc aacgccttcg gcctgctcgc actgttgccg atgctgctgc gcccgggcca
    45481 cgcgccactg aaaacccagc agttgccgcg ttatttcctg cgcagcgcga tcggcctggg
    45541 ctcgatgctg tgcgccttct gggcgctggg ccatctgccg ctggcgcagg cggtttccct
    45601 gtcctactcc accccgctgt tcgtcacgat tgcggcggta ttgtggttgg gcgaaaccgt
    45661 gcgtgtgcgt cgctgggcag cggtggtggt cggcttcatc ggcgtgctgg tgatcgtgcg
    45721 cccgggtacc gccggcttca ccgccggcag cctagtggcg gtggccgccg ccctgctcag
    45781 ttcgctggtg gcgatccaga tcaagcagct gacccgcgtc gacagcgccg acaccgtggt
    45841 gctctacacc tacgtgttct gggtgccgct gtcgctggtc ccggccctgt tcgtctgggt
    45901 ctggccaacc ggcactgcct ggctgtggct gctggccacc ggcgtgctgg gcaccatcgg
    45961 ccagctgttg tggacacgcg cgttgcgcct gggcgaagtc tctgcactga ccccgatcag
    46021 cttcctgcag ctgccgttgg tgacgctgtt tggctggctg ctgttcaacg aaagcgtgga
    46081 ccgctggacg atcaccggcg ccggcatcat ccttgccgcc aacgcctaca tcgcccaccg
    46141 cgaagccgtg ctgtcacgcc gcgccgccag tgccgccgcc tccgccgcag ccaaaccggc
    46201 cgagtaggtc cccctgtaga gtcgagccat gctcgactca tcgcgcgcag cgcgaagcct
    46261 catcaatgac gggtgacgtg cgtttacagc gcccgatacg cccgctccgc cgcatcgaac
    46321 acattacccg gagcaaactg ctcgcccagg taatgcagcg actgccggcg cagctgcggc
    46381 gagcgctcct cgccatcgct gcccagcagg acctgctgga actcgatcag gtcctgcaga
    46441 atgcgccagt gccggtacca cgcgatccag cgcggatctc ccaggtcgtt gccatagcct
    46501 gctgcgaaat ccagcggatt ctcgcgaccc caacgcccac ccacggcgcc accgatgaac
    46561 atcaggtcgc gctcgcgtgg cgccagcgac aggccatccc aatcgatcag atgcaggccg
    46621 ccatcattcc ccatcagtag attgccggca tgcaggtcgg tgtggcacag gtgcagatcg
    46681 accggtgcat ccttcaatgc agcgtgcagc tccagcgcgc tcgcatgcag cgccgcgatg
    46741 cgcgcatgct gctgatccca gaccgaagcg aatgcgcggc ccagcccatc ctgcgctacc
    46801 gccagccctt cacccaccag ccactgtccc accgtttcca gtgcggcggt ttccagccgc
    46861 acgatgggca acgcctgctg cagctccgct ggcagctgcg ccgcgtgcag gcgtcgcagc
    46921 acgtcgccca accgcttcca ctgcgtgcgg ctcagcgccg cctcgaagcc ggactgccct
    46981 tcgatgtagg ggaacaaggt gaactgcaac ccccagcgct gcaccgacgc acctcccgtc
    47041 aatgctggcc agggcgcgac gatttcatcg atccccagcg tgccgcgcaa ccagtgcagg
    47101 ctgtcccaca ccgctggatc gacctggtag gtgcggcact tcaaccacca ttgcccgcgc
    47161 cgcgcatcca cgcggtacac gctggcgctg gcatcggcgc ccaccgggcg tggcaccact
    47221 gcggtagcgg tgatgccata ggattgctgc aggacttcgc cgagatgctg cgccgaagcg
    47281 aatgacatgg atgcaaacgg aaagaattac ctgccgctac tatcgcagat gcgttggctg
    47341 cgacacagac atgtccgtca cacccttgcg cgtcgcgagc gatggattag ccggcgatgc
    47401 ggcgcatcag cgcttccagg ggaccgcgcg cgagctgcca tgaccacagc cacgccgcgc
    47461 cggtcgccag cagcaggaac agcagcgccc acagcagcac cgaggcgagc gaggcacggc
    47521 catccagcag gcccaggctt tccagcgtgc ccatgcccag caggatatgc ccgacgtaca
    47581 gggtcagggt cattcgcccg gccgcagtga acggtgccaa ccactcgccc gggcgtagac
    47641 gcgccagcca cagacaggcc gcgatcacac tgcaggccgc tcccgcaccc gtcagcacat
    47701 aggccggtcc cggcggcatc ggctgcgttc ccagccacgg ctgccagggc gttccctgcg
    47761 ccagctgctg cacgccatgc ccggccgcga tcagcgacag gcccagcacc agcagtgcgc
    47821 gctgcacccg aggctgcgac aacggcaggc gcgccagcag catgcccagc aggaagaagc
    47881 acagccacgg cagcaacgga tggaagccgt tgaacaacag attgcgcgcc ataccgggcc
    47941 actgccacag gccggcatac tccagcgtct gccagttcca gccttcgctg tagtcccact
    48001 gcagcagcgc ccagaacgag ccggctgcca ggccgacgat gctggccagc gacacccgtg
    48061 gcgacgcacg cagccacagc accgccagcg cgaagtacac cgcgtagtaa tgcaggatat
    48121 cggccgggaa cagcgtcaga ttgagcaggc ccagcaccag caggaacagt gcgcgccgcc
    48181 aggtctgcac gctggccggc caccacgcct gccgctgcgt agccagcacc aggcccagcc
    48241 cggccagcgt aacgaaagtc gccgaggcct tgccttccag caggtggaag aagccagcca
    48301 acccacccgt accctctgcg ggcacggcca tcgccaggcg gaagttgacc agcaccatgc
    48361 cggccagtgc gaggtagcgt gccaggtcca ggccgtgcag gcgccggtca tcggcgctca
    48421 tgcacgcgca cccagcagca gcgccagcag cccgatatcc agcggctcac catccgtctc
    48481 atcggcctcg cccagccccc ggcgcaatgc atcgctttcg atggcatcca gcagtacctg
    48541 cgcctgcagt ggcggagcca gcgccgggcg ccgccgctcg cgctgtgcca cgcgctgcag
    48601 ggcatcggcc agagcctgtt gcagctgcct gcgattggcc gcgaatgcct cggccacggc
    48661 gggggtgcgt gcgctctcgg ccagcacctc aaccgcaagc gtcgcccact gcggctgccg
    48721 gcacagcgca tgcagatcca gcaggaacgc catcacctgc gcgcgctcgc cgtcggcggc
    48781 cgccagccgc tgaagcatcg gtgccagttc ttcgctctcg gccaccgcaa ccgcaaggat
    48841 gatcgcctcc ttgcccggaa aatggttgta gaggttgccc aggctgacgc cggccacctg
    48901 cgcgatgtcg cgcatgctgg tctggtggaa gcccttggcc aggaagcact gcagcgccgc
    48961 ctgcaggatc agggccacac gctgctcatt gcggtcgaat cggctcatgg cacgaatagt
    49021 gaacgaacgt tcgtccattt cacagtgcgc gcgaagccac cggcaggccg gcgttcagcc
    49081 cccgctcgcg tcagaagaac tcgtcgagca accgatagaa cgccagacgc cgctcatcgg
    49141 cgatcacgcc gtaacgctgg aacagcggtg ccacccagcg cgtgtcacca aaattgtgca
    49201 cgaggctgcg cgcggccaat gccaggtcct ggtagcggtc ggccacgccc atgcgcccgc
    49261 aatcgatgaa accgctgaag cggtcgtcgg ccaccatcag gttgggcagg caggcatcgc
    49321 catggcagac cacccggtct tcatacgccg gccggctcgc gcaaagctcg acaaagacct
    49381 gttgcgcgct ctggcccagg cgttcgttgt cgaagtcgtc ggcgtcgacc acaccggctt
    49441 cgacgcgtgc ctgcgcggca tggaggcgcg atgccaaccg ctggtcgaac ggacaagtcg
    49501 ccacgggcaa ggcatgcagt ccacgcaatg cgtcggccaa caccgccacc acctgttgcg
    49561 gtggcagatc cgctgacgtg gccaggtcgc ggcccggcag cgcactcatc agcaaccaac
    49621 gccgacccgc ctcttcggca gtggccatca ccgtcggtgc gggctggccc tgtgcctgca
    49681 accagcgcag gcgcgcgatc tcatcaccca gttcgctgaa ggcatcgatc acttccgatt
    49741 tcaggaacgc atcggcctgc ccgggccgat gcacgcgggc aacatccgcg cgtgagacac
    49801 ctatcgactg ccgctcaaaa cgcgcgccgg ccaggtcctg ctgccaggcc tgcggcagcg
    49861 gcatctcggc aggagtggat ccggtttcgt ccatgcacat gcgcaggtcc agcgtcggtc
    49921 ggtgacgatg gcgattgtcg cgcacttccg gcagctgcgt cgccgcgctg aaccaggccc
    49981 atacgccaac gcgtggttcg atggacgaat cactgctagc cgtccacagt ggccggcgcc
    50041 gcgacggtcg ctgcaactcc cgcatacaag gaagcaacat gaagttgatg gtcatcggcg
    50101 ccagcagggg cctcggtcgg gcattcgtcg aaggcctgtg cggcccgggc gacaccgtcg
    50161 tcggcgtctc gcgcggtcgc ccgcgcgacc tcgcctgtcc cgaaggcgtc gagctgcaat
    50221 ggatcgaagc agacctgtcc cggcccaccg cagcggccga ccatatcgca gcgcaggcac
    50281 cggccgatat cgatgtgctg atccacaacc tgggcatctg ggaagacaag gccttcagcg
    50341 acgaatacgc atttctcgat gaaagcgatg ccgcgctcgc gcagctggtc gacgtcaaca
    50401 tcaccgccac cctgatgctg ctgcagcgcc tgttgccccg tgtattgaat gcagcacggc
    50461 cacagctggt gctgaccggt tcgacctcgg cactgccgcg cagcggccgc ccggaagtgg
    50521 ccttcggcgc ttcgaagttc gcgctcaacg gcatcgccga tgcgctgcgc gaaggcttcc
    50581 gcgagcgccg tctggcggtc accagcctgc agctgggcta tctcaatacc gacgatgcac
    50641 tgtcggtacc ggtggctgac gccgcagcgc gcggcgaagg cgggctggtg cccgtgcacg
    50701 acgtggtgac catggtgcgt gcactgctgc agctgtcacc ctcaggcttc gtgcgcgagc
    50761 tggtgctacc ggccatcgcc gacccgcgct actgactacg gcggccagcg cagggaggcg
    50821 ccggtggccg cgcgcgcggc cgtggtttac cctgctcctc actggccgtc ggtcacaggc
    50881 gggaacctgc tatggatgcg ctttcacggg ttacggccca ggtcctggac agtgccctgc
    50941 ccagcctgcc gctgtacctg ctgcaggcca ccgccgtcat cggcatgatc ggcgtgctgc
    51001 tgatcgccac ccgccgcgcc ggccatgcca tcgaagggcg ccgcctgtat gtgggcgtgg
    51061 cgctgggcct gatctacctg ttcaactcct ggttcgtggc ccgctatacc cagggcgtgg
    51121 tcaagctcca cctcggcttc gacatcctgc tggtcagcgg cctgctcggt ggctggcgcg
    51181 gtgggctggc ctgcctggcc gccagcctgc tggcccgcta ccagttctcc ggcacccagt
    51241 tcttcctgcc cgcggccctt gaatccctgc tgcagatgct ggccggcatc tggctgcgca
    51301 ggcgcctgca cccgcgcatg ctcaacgaac tctcgctgcc gatgatcctg caggcctggg
    51361 gcgtgcgcat cggcgtgacc gcgctgggcc tggccctcgg cgtggcgatc atcggcgccg
    51421 atcagctgcc ggtaacagaa ctggcgatcc agcgcctgct ggcactgccc gtgtcgctgt
    51481 tgatgctggg cgccgtattc gcactggtct acaacgatgc gcagatcgat gcccagcgcc
    51541 agcgcgagca ggcctggctg cgcatcgacc cgatcagcgg cctgcccaac atgcgcgcgc
    51601 tcggcgaacg cctgcagcac tattggcgcg acaacgacgg cataggtcat gcctgcctga
    51661 tcgtcgccga gatgggcaac ctgcgtgacc tgcggctgcg ttatgggccg ctgcaggata
    51721 acggactgtg gcggcgcgac agcggcgacg atgtgcaccg cctgctgcca tcactgcctg
    51781 cggacaggct ggagatctac cagttcggtg atgccgcgct ggcgatcctg gtccagggcc
    51841 tgtcgttgcc ggaactgcgc acgcagcccc gcatcaccga actggcgtcc gggctggccg
    51901 agcgcatcag cgaggagtgg ccaggcttcc ggccgctggt ccgctgcgcg gtggtcgaac
    51961 tgaagccgcc cggagacgcc gacgacgggc acctgccctt ccgcgcgatc accctggcgt
    52021 tgagcgcgat cgagtcgggc gtcgtgttct tcgacgatcc ggtccagcgt gacagcgaga
    52081 tcgacgtgct gatcgaaagt gcactggaac gctggctccg ccacggcgac gcgccgttgt
    52141 gctaccagcc caagcatcgc ctgcaggacc ggcgcctggt cggtgccgaa gcgttgttgc
    52201 gcatgcgcga cggcgagggc cggatgatca cgccgatgcg ggtgatctcg ctgctgcgcc
    52261 ggcagggccg cctggccgac ctggaatggg ccacgctgca gtcggccatc cacttcctgc
    52321 agcagtgccg gggtgacggc ctgcagctga ccgtggcggt caatgtctcc gccgagtcgc
    52381 tgcgcctgcc cggtttcggc ctgcgcctgc aggaactgct gcagctgcat gatgtgcccg
    52441 ggacgatgct gcggctggaa atcgtcgagt ggaccgagat cgtcgaacgc gatgtggtcg
    52501 atgccaatat cgcgcaattg ctggcggccg gggtgaccct gtcactggac gatttcggtg
    52561 cgggctactc gaccctgatt ttgctctcgc agctggccat cgccgaggtc aagatcgagc
    52621 aggcgttgat cgccacgttg tccgatgcca agtcacagtc gatcgtgcgc ttcatcgtcg
    52681 aagtcgcgca tcgctgcggc gcgatcgtgg tagccgaagg caccgagacc ctggcacagg
    52741 aacagcaact gcgcgcactg ggcgtggatg tcggccaggg ctatctgtat tcggcagcgc
    52801 taccggcgga cgaattccgt cgtttcgccg ccagctagat cgcgtagtag cccaggaaca
    52861 tcgccaccgc cgactcggcc acgcgcgcgc gctcctcggc gttcaacggt gcctgcccca
    52921 tcgttacctg cggccagaac gcaaagctct tcaccaggcc gtgcagctgg tgcccggcaa
    52981 attccggatc gaccgcacgc aggcgcccat cggcaatcgc cgcacggatc cacgcactct
    53041 cgccgctttc cttctcgccc atgcggcaga cgatcgcctg cgcgcgctcc ggcgaatgga
    53101 tgatctcggc catcgccacc cgcgccagat cgatgaagtt ggcgtcgctg agcagctcca
    53161 gcttctgccc caccagctgc agcagctgtg ccggcagtgg ctggtcggcg cggtacggca
    53221 gcgtgtcgct ggccacgctg cgctcccaca gctcctccag gatcatcgag aacaacgctt
    53281 ccttgctggg gaagtggttg tagacggtgc gtttggagac cccggccgct tcggcgatgc
    53341 ggtccatgct ggtggcctcg taccccgatg cacggaactc ctccaccgcc gcgcgcacga
    53401 tggcgtcgcg tttgcgatcg gtcaggcgtt gcggggcacg tggcatggcg gggaccagtc
    53461 agctgaacgg atgcgcacat tttacaccga gcagtgtact tttgaaaaac acgaaactac
    53521 actgtgcagt gtacccagcg gacgtcaccc atgaagcgcc tgctccttgt ccttttgctt
    53581 ggaatcctcg ccgtgaccgc ctacaccttc tgcaagtcct ggtccctccc cgacttcccc
    53641 gattcgccgc agtaccgcga cggcaagttc cgcaacgccc tgccgcggcc ggcaatgggc
    53701 ctgcgcgacg gcgcggagat ctggtggacg ttcctgttca acaagcccaa gggcacggtg
    53761 ccggcgcacc ccattccggt gctgccgctg gaccgcgccc gcctcgacgc cgcgcccgac
    53821 cgcagcctgt tccggctggg tcactcgacg atcctgctga agctgcgcgg ccagtactgg
    53881 ctgaccgacc cggtgttctc cgaacgcgcc tccccggtgc agtggatggg cccggcgcgc
    53941 ttccacgcac ccccgatcag catcgacgaa ctgccgccga tcgccggcgt gatcctctcg
    54001 cacaaccact acgaccatct cgaccacgcc gcggtgatgc agctggccgg caagaccgcg
    54061 cgtttcattg cgccgctggg ggtgggggac cagctcatcg cctggggcgt ggatcccgcc
    54121 aaggtggaac agctggactg gtggcagtcg accgaagcca gcggcctgcg cctgaccgcc
    54181 accccgggcc agcacttttc cggccgtggg ctgggcgaca gcgatcgcag cctgtgggcg
    54241 tcgtgggtga tccaggatgg tgacttccgc atcttcttca gtggcgacac cggctacttc
    54301 gatggcttca aggccatcgg cgagaagtac ggcccgttcg acctcaccat gatcgaaacc
    54361 ggtgcctatg acccccgctg ggcgttcgtg cacatgcaac cggaacagac cctgcaggcg
    54421 cacctggacc tgcgcggcaa gtggctgctg cccatccaca acggaacctt cgacctggcc
    54481 ctgcatgcct ggcagcaacc gttcgagcgc atcaccgccc tggcgaaggc aaacagcgtg
    54541 ccggtcgcca cgccgatgat gggcgaagcg ctggacatgc aggcgccgaa cgccggcacg
    54601 cgctggtggg agcaggtgca gttgtagcca gcgatcgcgc cctgcctgga accctctgcc
    54661 gcacccgcct cgcgcgggtg ttgcagcagg gcacagccgc ccctggcggc ccggacgggg
    54721 acctgcagcg ggtcggcgac ctgattgttc ggctgcccgg atgatattgc cggatcaagg
    54781 gggattatcc gccccgcaat cacgtccagg atgaccgtgc gccatgtggg tgcgccttcc
    54841 tggatctgaa catgaacatc gcttcctcaa cccccgttgc ccttgtcacc ggcggctcgc
    54901 gcggcatcgg tgccgccatc tcccgccgcc tggccgccga tggctttgcg gtggccatca
    54961 actacgctgg ccgccaccaa gaagccgaag cactggccac cgagttgatg gccaaggggg
    55021 gccaggccat cgcgcttcag gccgatgtcg ccaacccgca gtccgtgcag tccctgttcg
    55081 atgcgatcga ggcacgcttc ggcggtgtcg atgtggtcgt gaacagtgcc ggggtactgg
    55141 aactcgcttc gctggccgag agcgaagaca ccctgttcga ccgcctcatc gccatcaacc
    55201 tgaagggcgc attcaatgtg ctgcgcgaga gcgcacgacg ggttcgcgat ggcggccgca
    55261 tcgtcaccct gtccaccagc gtggtcggat tcaagctcga gcgctacggc gtctatgccg
    55321 caagcaaggc ggcggtggaa accatgagcg ccatcctcag caaggaactg cgcggccgcg
    55381 gcatcaccgt gaacgccgtc gcaccggggc cgacggcaac gagcctgttc ctggaaggca
    55441 agtcagccga actgatcgac cggcttgcaa agatgagccc gcttgaacgc ctcggcaccc
    55501 cggatgacat cgccgcggct gtggcctttc tggccggtgc cgacggcggg tggatcaacg
    55561 gtcaggttct gcgtgccaac ggcggcgcgg tctgaaccac ggagagacgc catgaatccg
    55621 atccccgttt cccgcagtgc ctacgccctt gtcacggtga ctgcggcgct caccgcggcc
    55681 ttcgccgcag ccggggcgct gcatgccggc tggccggtgt ggacgatgtt catcggttgg
    55741 attgcctttt tcacgcgact gcagggcacg cgctccacga tcgaaaacct ggcctgcgtc
    55801 tggttcgggc tgggcatcgg cgcattggca acacttgcag tgggcctgct ctctccttca
    55861 ctgggtccct cgctggccgt gcccgtcgtt gtactggtcg tagcgctgtg cgtggtcgcc
    55921 ctgcgtggcc tgccggtatt gaacaacctg ctggggtact tcctcggact ggtcagctgg
    55981 ttcgcggccc accttgagcc ctcgctggcc catctctccg aactggccgc ggccagcgcc
    56041 ctcggttcac tggccgcctg gaccgcgcac accgtgccgc agcgcctgtt ggcccgcgcc
    56101 cggccatgac cctttcttct tccggagctc ccatgtcaca cactatcctc atcaccggcg
    56161 catcctccgg cttcggcctg atgaccgcca aggcactggc ccttgccggc cacgtcgtct
    56221 acgcctcgat gcgcgaaaca cgcgggcgca atgcaacccg cgtggccgac atcgcacagt
    56281 gggcagacgc gcatcacgcc gaccttcgta gcgtcgaact ggacgtacag tcggacgcgt
    56341 ccagccaggc ggcggtcgaa caggtgctgg ccgacgcagg cgcgctcgac gtcatcgtgc
    56401 ataacgccgg gcacatggtg ttcggaccgg ctgaagcatt caccccggaa cagctgatgc
    56461 agcagtacga cgtcaatgtg ctgggcacac agcgggtgaa ccgcgccgcg cttccgcacc
    56521 tgcgccgccg tggcaacggc ctgctcgtct ggatcggctc gtcctccaca cgcggtggca
    56581 ctcctccgtt ccttgcgccc tacttcgccg ccaaggccgc aatggatgca ctggccgtgt
    56641 cctattcaac cgaactgtcg cggtggggca tcgagaccac catcatggtg ccgggtgcat
    56701 tcaccaaggg caccaaccat ttcctgcatt cgggcacacc cgccgatacc gccatcgcgg
    56761 ccgactatga gaacggtccc tacgccggtg tcgccgacca ggcactgaag ggcctggcag
    56821 ggttggagcc tgcagatgcc gatcccgagg aggtcgcgcg gcagatcgtg cgggtggtgg
    56881 gcctgccaca cggacatcgg ccgttccggg tacatgtaga cccctcacag gacggcgccg
    56941 aagtggtcaa tgccgttgcc gatcgcatgc gacgcgaaat gtacgcctcc atcggtcttg
    57001 cagacctgct ctcgccacga ggctgagccg ggaaaatcaa tgcacctgcg gggcgccttc
    57061 gggcgccctt tctgcaggac cccagcgcgc gggtgacagc gctgatccgg cagcctggca
    57121 ctaagccttc ggctgcaacc tgcgcctttc ccgggccaga ttcaactgca atgcggccgc
    57181 ggccagttcg gccatttccg tggtgacctt ctcgctgcca cgcgcgcgca accaacccag
    57241 aatgtcggcc aggtgccaga tggaggttga gccgtcatgc accggggacg gaaacgactg
    57301 cgggttggcc agcatcagct tccgcatgtt ctgtcgcgac atcccgagca gatcggccac
    57361 atccgtaagc cccaccagat ccgggctcac ctccaccagt tcggcacccg gcacggcccg
    57421 ctgcacgtca tccacggccg agcacagcgc gaccaccgcg ctgtcggcgt cacggcagaa
    57481 ggccagcgcc atccttcccg gcaagccact gcccagaagc gcgtcgtcac accccgcctc
    57541 taccagccgc cgctcaagca ctccgacgtc atcgcaacgt tcgggcaagc ggtacttcag
    57601 ggtgaaattg aattccatca tctgccacct cgcttccatc gaagcctgat ttcattgctc
    57661 acgactgcag ttctcgacca cgcggcgcaa ggcgcgcgca tggttgccag gactgcgcgg
    57721 cgtgctccag atgctcacga cacagaattc tccgcatcgg cagtcggtgt cgttgtaagg
    57781 gcaatacatc cggccccacg cgtggctccc acctacacgg agactccagc ctcgagcttc
    57841 cgcgaaccgc agcaccgatt cgatgtcctt gtcgggatga cgagcacgag acattccttg
    57901 ttctccccag tctgcacatg acaggcccgg gttgtcaaat gacaacccgg acactcaacc
    57961 ttgagcaatg accctaggcg atcctggcca cgcgtccaga gccacatccg tcagcgctcg
    58021 ctgcatcgcc taccgcagcg cgtcatgtaa acggttacaa cccttgctag cgtagcgctc
    58081 gcccgatccc ggccgaacct gcgaggttgt ctgtaatggc atttcgcgtt gaacgctcca
    58141 cggtcctgaa gctgccctcc tctttccgtc ccaccgcagc cctgctgttt gtcgggctgg
    58201 cattttccgc gcaggcccag aacctgccgg cccgcgacca gtggcgggca agtgcttcat
    58261 cgcagcaggt cccggccatg gccatcagcc acctgatcga caacgatccg agcacggtga
    58321 ccggcggcgc gttcagtccc ggccactggt tccagatcga cctcggcgcg ccggccacgc
    58381 tcgctggcgt gcgcctgacc tgggatgtct cccatcccga gggctacacg ttgcagacct
    58441 cgctggacgg ggcgcagtgg cagaccgcct acaccatggg cgattcactc ggcggcgtcg
    58501 aaacgctgta cttcacgcca cgccaggccc gctacctgcg cctggccagt ccgcagcgca
    58561 cctccgactg gggcgtgtcg atcttcgaaa tggaaccgct cgacacgtcg ctcagcgcgc
    58621 gtgtggtggg actcgatgcc acgcagtccg cagtgctgtg gcaaggcggc agtgcggtag
    58681 ccattcccgc tggcaagggc ggtgtccata cgctcgacat caccttgcca cgcccgcagc
    58741 cgagcaccgg gctggcggtg gactgggcca gcgtgcacgg tgccgcagtc ttgcaggccc
    58801 aggatggcaa agggcgctgg cacgagctgg caaaggatgc gcaggccgcg acccggcagc
    58861 agagctggct cgccgccagc gcgccgctcg acatccacgc actgcggttg acggtgcacg
    58921 gcgacgctcc gaagatcgcc cgcatccgcc tgctgggccc gaaggcggtg atgacgccga
    58981 tgaagcgtta ccagattgcc gccagcggtg cgcaacgtgc cttgttcccc gcctcgctgc
    59041 agatgcagca gacctactgg accgctgtgg gcgtgcacgc gggccggcag aaatccatct
    59101 tcgacgagta cggcaacctc gaagccttca agggtgcacc gctggtgcag ccgatctggc
    59161 gcaatgccga cgggaacgct gcaggtgcgg cggggcagac ggtgcagcat gccctgcgcg
    59221 atggctggaa gccaatgccg tcggccacct gggcgccgca gcccggactg gagctgcgca
    59281 gcgaggcctt cgccatcgag cgcgacgggc agccggtcac cctgcttcgc caccggctgc
    59341 acaacagcgg cacgaccacg atcaacggca cgctgaccct agttgtacgc ccgatgcaga
    59401 tgaacccgcc gtggcagaac ggtggcctgt cgcccatccg cgatgtgtcc gtcgaacgtc
    59461 aggcggtgcg cgtcaatggc cgcaccctgc tgcattcact caccccggtg acggcgtcgg
    59521 gcgccgcgcc cttcggtgcg gaaggtgcaa cggaaatcac tgccgccatc gccgccggca
    59581 cgctgcccag tacgcaacag gcacgggatg accaggggct tgccgccgcg gccctcagct
    59641 atcgtgtttc gctgccgccc ggggccagcg atgccgttgt ggtcgccttc ccgttgggga
    59701 ccgccgccgc cgatgccaac ggcgcgctgc cggacactcc gccgctcgat ctgtcctcgc
    59761 taccacacgg ggccgatcct gcgttcgatg cgctggccgc gcaggcctcg gcggattggc
    59821 aggcacggct gggccaggtg gggctgcgcc tgcccgatcc ctcgctggtc gacatgctgc
    59881 gcgcgcaggc ggcgtacatg ctgatcaacc agaccgggcc ggccatgcaa ccggggccac
    59941 gcaactacaa ccgttccttc atccgcgacg gcatggccac ctcggcggtg ctgctgcgca
    60001 tgggcgaagc caaggtcgcg cgcgactacc tggcgtggta cagcgagcac ggcgtgcacg
    60061 ccaacgggct ggtttcgccg atcctcaacg acgatggcag cgtcaacacc ggttttggtt
    60121 cggacatcga gtacgacagc cagggtcaat acgtggcgct ggttgccgat gtcgcccggc
    60181 tcgatggcgg gccagagtcg gtgcgtgcgt acctgccgaa agtgaaagcg gcgctgcgct
    60241 tcctgcagga actacgcgag cgcacgctgg tagcgggtta catggccggc cagccggcgc
    60301 cggaacgctt cgcgggcatc cttgcgccat cgatcagtca tgagggctac ccctcgccca
    60361 cccacagcta ctgggatgac tactggggcc tgaagggctg gcacgatggc gcgtggctgg
    60421 ccgacgcact gggcgatcac gaaaccgcgg tgtgggcgcg ccagcagtac aaggccctgt
    60481 acgacgcgct gcacgcctcg atccgggcga cgatggcgtg gaagggcatc gacttcatcc
    60541 cgtcctcggc ggatctgggc gatggcgatc ccacgggcgt atcgatcgcc ctggacccga
    60601 ccggcgcgca gagcgtgttg cctgacgatg cattgcggac caccttcgcc cgctatctgg
    60661 aggacgtgcg caagcgcaac cagcccggtg cgctgtatgc ctacacgccc tatgagatcc
    60721 gcaatgtact gagctacgtg cacctgggcc agcccgaggc cgccgacgaa ctgctgcagg
    60781 gactgctgca tgaccggcgc ccgctggaat ggcaggtgct ggccgaggtc gtgcattcgc
    60841 ggctgcgttt cccgcgctat ctgggtgaca tgccacacac ctggattggc gccgagtacg
    60901 gccgcacgct gttcggcatg ctgatgcgcg aagacgatga cgcgctgtca ttgctgcctg
    60961 gcactccgcc gtcctgggtg gccggcgatg ggttggcggt ggaacggctg cccactgcgt
    61021 atggcacttt gcagatgcag gcgcggcagc gcgacggcac gctggtggtc acgctgggcg
    61081 acggactgcg caacgacact gcggtgaagg tctggtggcc ggagcgcacg ataccgaaat
    61141 cggtgcgtgt ggatgggcgg ccagttgccg acttcgacgc cgagggcgtg cgcctggcga
    61201 aaccgttccg gacgctggaa gcgcgttggt agagtcgagc ttgctcgact gcacttcgcc
    61261 gccccctacc ccagtagagc aggctcgacg ctacagggcc gcgccgggcc acgcccggcg
    61321 tcagagtgca ggcaaccccg gcgggttcgt ctgcgactgc ggcaccgctt cctcggccac
    61381 gttccagcgc gccagcgcct gcgcatacgt gccgctgccg atctgggtgt tcagcgcctg
    61441 cgtcactgcg tcggcaaggc cgctgccctt gcgcgtggtc accgagatcg ccgcagcatt
    61501 tggccagcca ccggggaaca ggcccacgcg ccgcaccttg ccgtcgcgcg ccgaataggc
    61561 gccggtggca ttgggttcga acgagacgtc ggcgcggccg gtgatcaccg caagccgccc
    61621 caccaccgca tcatcaaagt actggtattc caccggcttc agcccggcgg cgatgttctg
    61681 ctggtcccac tgccgcagga tctggtcctg gttggtggca gcaccgacca ccaccttcaa
    61741 cccggccacg tcggcaggtt tttcgatctt ccggatcggc ccatcgctgc gcgtatagat
    61801 gcccagcagg tcgtagcggt aactggagaa atcgaacttc ttcttgcgct cctcggtgac
    61861 cgtcacgttc gacagcaccg catcgtactt gcccgattcc agccccagcg gccagtcagc
    61921 ccaggccacc ggcacgatca ccagcttcag gcccaatgca tcggcaatca gccgcgcgat
    61981 gtccggctcg atgccgacca cctccttgct gtcggcacca tagtcggcca gtggcagctg
    62041 ccccgggtgg gtggccacgg tgaacgtgcc gggcgtgacg aagcggtagc cagcgggaat
    62101 caacgcctgc gccttcggat cgagcgtgcc tttcagcacg gcggtgttcg cgccggccag
    62161 gctggccgcg gccacattgc cagcatctgg tgcctggcgc acgcgcgaat agacgatgcc
    62221 agcgatgccg atgaccagca cgcccacgat caacagggtg ctgcgcgaag gccgacgcgg
    62281 tgctgcaggg ctcatggcgt tcctttcagg gttacggagt cttggccagg aaatcggcgg
    62341 tgcgttgctg gcgcgggcgc tggaacaggg cctcgggcgt ggcctgctcg atcacccgcc
    62401 cctggtccat catcaccacg tggtcggcca cgcgacgggc gaagctcaac tcatgggtga
    62461 cgatcaccag cgtggtgccg gagcgggcca gttcctcgat cacgctgagc acctcggcca
    62521 ccagttccgg gtccagcgcc gaggtcggct cgtcgaacag cagcactttc ggttgcaggg
    62581 ccagcgcgcg ggcaatcgcc acgcgctgct gctggccgcc cgacagttgg cgcgggaagg
    62641 catcggcctt gtcggccagg cccacccgct ccagcagcgt gcgtgcctgc tgttcggcct
    62701 cggcacgcga cacgccgcgc acggcgatgg gcgcctcgat gatgttctcc agcgcggtca
    62761 ggtgcgggaa caggttgaag ccctggaaca ccatgcccac ctcggcgcgg cggcggcgga
    62821 tctcgcgctc cggcagctcg tacagggtgt caccgtcacg gcggtagccg atcagctggc
    62881 cgccgacagt cacgtaacca ctgtcggcgc gttccaggtg gttgatcagc cgcagcagcg
    62941 tggacttgcc ggcgccggac gggccgatca gcacggtcac gctgccggcg cgcaggtcca
    63001 ggtgcacatc ctccagcacc ggctggtcgc cgaatacctt gccgacgcca tgcagcgaca
    63061 ccgccgcgcc ctcgcccgcc tcgacctgtg ctgcgatgcg cgggcggttg gtggcacgcg
    63121 gcgtggcatc gtgctgtgca cgcgtcggcg acgagacacg tgataccgag cgctcgcgct
    63181 gcagttggcc gcgcgcaaag cgctgctcca cccgtcgctg cagcagcgac agcacggtca
    63241 ggatcaccag gtaccagacc gtggccacca tcagcaacgg caccacttcc aggttgcgcc
    63301 ggtagatcac ctgcacggtg tagaacagct ccggcagcgc cagcacgtag accaccgagg
    63361 tgctcttggc caggccgatc acatcgttga acgccgccgg caggatcgag cgcatcgcct
    63421 gcggcaggat gatgcggcgc acctggcggc cacgcggcag gccaagtgcg gctgccgcct
    63481 cgtactggcc atggtccacc gacaggatgc caccgcggat cacttcggcc gagaatgcgg
    63541 cctggttcaa cgtaaggccc agcaccgccg ccgtgaacac accgatcagc tgggtggtcg
    63601 ggtacgagaa caggctgatg ccggtgaacg gcacacccag ttcgatggtg ctgtacaggt
    63661 agcccaggtt gttcagcagc aacaacagca ccagcagcgg gatcgagcgg aacagccaga
    63721 cgtagcccca cgacaccgcc gacagcagtg gcgagccgga gacgcgcgcc agcgcaagca
    63781 gggtgcccag cgcgaagcca aggccggtac ccagtgcagt cagcagcagc gtacggccca
    63841 ggccttccag caccgggcgc gcgaagaacc actcagcgaa ggtgccccag ccccagcgcg
    63901 gattgcccag caccgattgc agggcaatca ggatcaacgc cagcgccagc atcgttccga
    63961 acacctgcag tggatgccgg gccggcacga tcttcagcgc gggtgccggt gcagggcgcg
    64021 cggcgattcc atcaagtgcg gtcgacggcg tactcatgcg tgggctccgt gcagcacagc
    64081 ctgcgtctgc gcgacccgcg acgcaggcgc ctgaagatat ttctcgaacg gcaggtgggc
    64141 gatggtttcc gggtccgcct gcagatcgaa cagcgcggtg tacgcatggc tgaggtacag
    64201 gccgaccgct tcgggctggc ggaagccggt ggtcaggaac acccgccgat agccctgacg
    64261 cgcggcctgg tcttccagtt cctgcagcac gcgccgcgcg atcccctgcc gacgcagccc
    64321 gggcagcgtc cagatccgct tgaattcggc agtctccgga tcgcggtgcg gcatgaaggc
    64381 gccaccggag atcgcaacgc cgtcgcgcag cagcagcacg aacgcgccta ccggtgcggc
    64441 gaatgcctgc gcggggtagc gctgcagctc ctcgcgggca ctgccaccga tgcggcggcg
    64501 aacatccgca tagcggctgt cgtactcctg ttccaggcca tcgaacaggg gccgcgccag
    64561 cggatcatcc accgaggtat agaagaagcg ttcgttgctg ctcatgccac gtccttcacc
    64621 agatagtctt cggccagccg tgcccacaga ctggcggccg gcgcgatggc ggcgtcgttg
    64681 aacacatagc gcgggctgtg caacggtgcg ctgtcgccgt tgccgacaaa cacgaaactg
    64741 ccgggccgtg cctgcagcag gaaggcgaag tcctcgctgg ccgtgcgcgg cgcgaagccg
    64801 ggcaccacct gttcggcgcc gaagcccgct tccgccacgc cacggatata ggcggtctgc
    64861 tgcggatggt tgatcacgct ggggaagcca cgcgggaacg caatctcggc ccgcgcaccg
    64921 aaggcggcgg cggtctgctc ggcaatctcg atggtccggc ggcgcagggt gtcgcgcacc
    64981 tcgggcagat aggcgcgtac ggtcaacgtc agttcgacca cgtccggaat cacattggcg
    65041 gcctgcccgc catggatcga gccgaccgtg accacgccca tctgccgtgg atcgacattg
    65101 cgcgatacca cgctctgcag cgcggtgatg atgtgcgccg ccaccaggat cggatcgaca
    65161 ctgccctgcg gctcggcacc atggccgccc ttgccgatca ccttcagccg cgcccagtcc
    65221 accgacgcca tcgccggacc gtcgacgaag ccgaagtggc ccacgggtac gcccggccag
    65281 ttgtgcagcc catagattgc atccaccggg aagcgctcga acaggccgtc ggcaatcatc
    65341 ttcgacgcgc ccgagccggt ttcctcggcc ggctggaata ccagctgcag ggtgccgtcg
    65401 atacggccat ggtgaaccag gtaatgcgcg gccgacagca ggatggcggt gtggccatcg
    65461 tggccgcagg catgcatcag gccgtcggtc tggctggcat aggccagtcc ggaatcctcg
    65521 tggatcggca gtgcatcgat gtcggcgcgc aggccgaggc gacggctgcc ctgcccgcgc
    65581 tgcagcgtgc cgaccacgcc ggtgccgccc aggccggtgg tgacctcata gccccactgc
    65641 tgcagcagct cggctacgcg ggcactggtg cggtgttcct cgaaggccag ctccgggtgc
    65701 cggtgcaggt cgtggcggat cgcgatggcc gcgtcggcgc gtgctgcgat ttcaggcagt
    65761 acgccagtcg ttggggaact ccgccgggca tgccccggcg ctaccgcgtt ttctccgctc
    65821 atcgccctac cctgccttcc gcgccggttc ggcatcgctt gtatggcggc tggccttgta
    65881 tggcaggccc agatgctcgc gcagggtctg cccctccagc tcgcgctggt gatagccgcg
    65941 cgcctgcagg atcggcagca cctgggtcac gaaatcgtcc aggccttcgc gctgtgcagc
    66001 gaaaccgaga atgaagccgt cactggcacc ggcatcgaac cagcggatca gttcatcggc
    66061 cacatgctcc ggcgtgccga tgaagtttgg ccgcgggctc acggcttcca atgccacctg
    66121 gcgcaggctc aggccctttt cgcgcgcgtc ctgcttgatg cggtcggtgg tggaacggaa
    66181 cgaattgctg ccgatcccgc ccagttccgg gaacggcgca tccgggtcgt actggctgaa
    66241 atcatggtgg tcgaagaagc ggccgagata agccagcgcg tcctcaagcg tggccagcgc
    66301 ggcaatcgcc tggtacttgg cttcggcctc ctcggcagta cggccgacga tcgggccgat
    66361 gcccgggaag atcttcacgt cattgccgct gcggccgtgc gcgatcgccg aatttttcac
    66421 cttctgggtg aatgcccggg tttcttccag cgacggcgaa tgggtgaaca ccgcatcggc
    66481 atacttgccg gccagcgcga tgccatcatc ggacgagcca gcctggaaga tcaccggctg
    66541 gccctgcggc gaacgctgga tgttgagcgg cccttccacc tggaagaagc ggcccttgtg
    66601 gtcgagccga cggaacgtgt ccggcgcgaa gaacgtgcca gtgtcgcgct cgcgcacgaa
    66661 ggcaccgtca tcccacgaat cccacagccc ctgcaccacc tccaggtact cgtcggcaat
    66721 ctggtagcgc agcgcatgct cggggtgtgg ccgcccgtag ttgcgccccg aaccttccag
    66781 cggcgaggtc accacattcc agccggcgcg accgccgctg agcaggtcca gcgaagcaaa
    66841 ctggcgcgcc acggtgaacg gatcgctgta cgaggtcgac agcgtgccgg caagcccgat
    66901 ctttctcgtt gccgtggcca gcgccgacag cagcgagatc ggctcgaagc ggttgaggaa
    66961 gtgcgggatc gacttctcgt tgatgtacag cccgtcggcg acgaagccga aggcgatgcc
    67021 gttgtcctcg gcggtacgcg cgatgtcgat gtagaactgc aggttgacgc tggcgtcggc
    67081 cggattggac ggatgcttcc aggcatgcat gtggctgccg gggccctgca gcatgatgcc
    67141 gaacggaatg tggcgcgggg tcgtgctcat gggaatcgct cctgcaggtc aggccaccgc
    67201 cgcgcgtggc gcgggcgaca gcagttcaag ggatgtcagg cgtgcgtcga ggtcggccac
    67261 cggcgcatcg aggatgaact cgcccacgcc gaagcgccgg tgcagcgcat ccagttcgtc
    67321 acgcacatgc tgcgcatcgc cggacagcac gctcgggcgt gtttcttcga tgcggaagtc
    67381 ggccacgcct acctggcgcg cgtactcagc tgcggcttcc ggactgggca gattcaccgt
    67441 ctgcccggga ccgaggtgca gcttgtagac ccgtagcgca ccgatatggc gcgcggcagc
    67501 ctcggtggtc ggcgcagcga aagccaccgt ggccagcagc ggtggttgcg tcgacgcact
    67561 tcggtaagcc tcaaaggccg cctcgatatg ctttggatca ccgtcgaagt gcgcggcgta
    67621 gacaaaacgc cacccgagtt cggccgcctg cttcgcactc tgcgggctgg cccccagcag
    67681 gaagcgttcg ggtgcctgct gcggaagggg ccgggccagt gcatcagcct cggcgccgga
    67741 cagatagcct tccagatcgc gcaactgctg gtcgaaatcg gcgaaggccg gtcgtcctgc
    67801 cgccagcgcg gcggtcgacg cgggcaaccc accgggcgcc ttgcccacgc ccagatccac
    67861 ccgccccggc gccagcgccg acagcaggtt gaagttctcg gccaccttgt acggtgcgta
    67921 atggcgcagc atcacgccac cactgccgat gcggatgcgc cgggtctgcg ccagtaccca
    67981 cgccgccagc acttccggtg cagggctggc cagcgtgggt gcggcatggt gctcggcaaa
    68041 ccagtagcgg tggtaaccca gctgctcggc gcgctgcgcc agctgcaggc tgtggcgaag
    68101 cgcctgctcg ggcgaggcac cttcggccac cgggctcttg tccaacacgc tgatcaggta
    68161 gctcatcgtc gcgtcctcgc tcaggggtgg gccacgggaa tgccaagcaa cccgttcagc
    68221 gccgccagga tcggttcggc accggagatg tactggcggt cctggtgcgc accgctggca
    68281 agctcactgc gcacgccctg cggcaatacc agcttcggca gtgactggtc ctgttcaccg
    68341 atctcggcga tcacctcacg gcgaggccgc gcaaagccga tgcggcgcac gtccaattgc
    68401 gcgtccaggc cgtcgatgct cgacagcgca ccttccagca acaggctgtg ccggcagaag
    68461 aagcgctggc cgggaagctg gccgtcctcg aactcacgat cgagcaggaa caggatgggt
    68521 ttgtcggttg cgtccagact cacggagtcg tcctcatcag ggccggcaat gcaatgccga
    68581 ttcgatttcg atgctagaga agccagcgcc ggcaacagcg atgccaggcg acaatcggcg
    68641 gtcagatccg gccacgcaga tgcgccttgg ccataagcaa agcgccaccg gttatgggat
    68701 caggcaatgc gccgaagcgg caccggcagc acgcgagcct gcgtggccag atgcccgatc
    68761 gcacgctcgg ccgccagcgc gatccgggcc tgcaaggcag cgctgtggat gcgctcaccg
    68821 tcgaagtcgg ccggcgtggc atacaccccg atcggcagcg tgtgcgcctg caggaagctg
    68881 aacaacggcc gcagctggtg gtcgatcacc agtgcatggc gctcgctgcc accggttgcc
    68941 gccagtagta ccggcgtatc caccaatgcc tccagttcga tgaaatccac caggtgcttg
    69001 aacaggccgg gataagagcc gcgatacacc ggcgcggcca ccaccagcag ttcggcagcc
    69061 tcgatcgcct gcagtgcctg ctccacttcc ggctgcgcct cggcgcgcga cagcgcctgg
    69121 cccagcgaac gcgcgatcgg cgccagctcc accaggtcca cgttggcgtg cacccgctgc
    69181 tgcagcgatt ccagcaggtg ccgcaccagc agcaacgtac gcgacgtcgc ggaactggtc
    69241 ggcgacccga ccaaggcaac caccttcaat gcagaagaca tgaaacgctc ccatgtagag
    69301 ccgagccctg cccggctgct ttcgccgttg tagagtcgag ccatgctcga ctgccgttgg
    69361 cctgaacctc agaaccggta attgatccgc ccgtaccagt acgcgccaac attgcccagc
    69421 acatcgccgc tatcccacgt ggtctcgatg ctggccacat cggtggcgct gcgcgcgtac
    69481 tcgggcacct tgcgggtgcg cttgtcgaac acattgttga tgcccagtgc cgcactccag
    69541 cccgcaccca gctccacagc accggacagg ttggtcacca gcacgggtgg ctgcttgtac
    69601 tccacgccgt tgttcaggcg cttgatcggg ccgtagtagg tgaagtccac gttcgagcgc
    69661 caacgcccgt tctgccagcc cagccctgcc acctgcgtgt agctgggcgt gcggaagcgc
    69721 agcgcgtact cgctggactt tgtcagcagg ttgatgttcg gcagaccctg cagtgccgcc
    69781 ggaatgtcgc tgaccttctg gatggtggta cggccgacgt tggccgcgta gctccagcgc
    69841 agcttgcccc aggcggtttc ctggttggct tccagggtca gctcgacgcc gcgcgtgcgc
    69901 gtgttgccca cattggtgaa gtagctggcg tagaacgcat caccgggcag gatgctgatg
    69961 ccggccgagc ccagcagcgc atcgatggtg ttcttctgcg ccgcgctcag caccgtgccg
    70021 ctgttgtcgg tcacccgcgc cgggtcctgc gcgttgtagc cgatctggct ggactggccg
    70081 agctggccgc ggatgtcgat ctgatacgca tccactgcca gatggaacgc cgggctcggg
    70141 tcccaggtca cgcccaggct gtagttggtg gccttctccg gcttcagcgg cgttgcgccc
    70201 agtgcgatcg ccgcaggcga agacacctgc gccaccagcg tggtcccgca cgggcagctg
    70261 ccggtggcct ggtagaactg cgcgcccagg ctgggggcat ggaagccgtt gctgaccgtc
    70321 gcgcgcaggc ccagtgcatc ggtgaaatca aagcgcgtgg tcaggcgccc ggtcgagaca
    70381 ctgccgaaat ccgaatggtc ttcccagcgc gcggccgcat ccaggtacca gcgcgaggtg
    70441 atgttggccg ccgcgcccac gtacaccgcc ttgctgttgc gcgtggcctt caccgcatcg
    70501 gccgtggagt agccgacgaa cgcggcggcg ccgaagccgg tgtacgactc ccactgccca
    70561 gcctcacgct cgtactgctc gtgctggtac tcggcgcccg cacttacttc cagcggcgat
    70621 gcgaacgccg ccacttcgaa gccacggcgc agatccaggt tggcgatgcc ctgctggtag
    70681 tccagcttgc cgtcatagaa atcggtgggc gagcccgggt acggcagtga gtagttcacc
    70741 gagttgcgcg tgtaggtgcg cacggtgctg cggttgccgg tcaggctggc gtcgtagtcc
    70801 cagcctgcga gctggccttt cacgccggcc gtaccggtgt actgcttctc cttggtttcc
    70861 agcaccggca ggaagccgtc cggaaacacg ctcagcacgc ccggtgcctt gtacgtggtg
    70921 aagatggtcg cgggcagacg gaaattctgg atcgcctgcg cggtgcggtc gctggcggtc
    70981 gcgttggcat agaactgcgc gctttcaccc aggccatgac ccacattcac agcgaaggcc
    71041 ttcaacgcat acgacggcga actgaggatg gtgttggcct cggcattgcg gttggcctcg
    71101 gccgggttcg gcgaggctcc cgccggcagc cggttattgg ggcgcagtgc caccaggttg
    71161 ccgttcgcgt ctaccgccgg gtagctcagg tagccatcga tgtagcggcg ggtacggatt
    71221 gcatgatgct ggcgcgtgct ctcgccggac aggttgacga agccatcggc gccccacggc
    71281 aggcccacgt tggcacgcac gctggtacgc gagccatcgc catcgatgct ctgcccgctt
    71341 tccaccgaca gatcgccacc gtgcgcctgc gatttcagga tcacgttgac cacaccggtg
    71401 atcgcgtccg agccgtagat cgccgaggcg ccatcgcgca gcacctccac gtggtcgatg
    71461 gccgataccg gaatcaacgc cagatcggcc caggcatgcc cgggaaagcc accaccgttg
    71521 gccccgctca cataggcgct ggcattgcgg cgcttgccgt tcaccagcac cagcgtgtag
    71581 cccggcgaca gattgcgcag ctggtagccg cggatcaggc tctcctggtc gctctggtag
    71641 ccaccgatct ggctcagcga cggcagcgca cgctgcaacg cttccagcag gttgccctgg
    71701 ccggtggcgg tgaggtcttc ggcggagatc acatcgatcg gcgtggaact gttcttcacc
    71761 gtgcgcgtgc tggtacgcga accggtcacc accacggcat ccagcgtgga cgcggccaca
    71821 ttggcggtcg ctgcggtggt ggcgggctcg gcatcggctt cagcggcgtg gctgggcgag
    71881 accgccaggg ccgcgg
//
LOCUS       DAOKIP010000003        63344 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.003,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000003 DAOKIP010000000
VERSION     DAOKIP010000003.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 63344)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 63344)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..63344
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.003"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..617)
                     /locus_tag="QEL58_000156"
     CDS             complement(<1..617)
                     /locus_tag="QEL58_000156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011259949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage late control D family protein"
                     /protein_id="HDS1674683.1"
                     /translation="MDIPSSALLASLASLSHRERLIQLKGPEEGLVVERFEGTESVCG
                     DNRLQIDCLATDAFLELESWLEQPLTLQLRQADGSLRQWHGLCTEAAQLGSDGGLARY
                     RLILEPWTALLRLRRNAVIFQDQDTRAICEQIFTDYPQAVFRFDVQAELPVRAITTQY
                     RETDWAFVTRLLAEAGLAWRIEQAQGDEAAHTLVVFEPGAELPDCG"
     gene            complement(628..1422)
                     /gene="icmH"
                     /locus_tag="QEL58_000157"
     CDS             complement(628..1422)
                     /gene="icmH"
                     /locus_tag="QEL58_000157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019304316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IVB secretion system protein IcmH/DotU"
                     /protein_id="HDS1674684.1"
                     /translation="MMNSPLPPTPGPMPSLTANGAMANPTPQAANPQSLQDLMSDGFY
                     LLLLLKRGQLPHDAESFVQTVQKFLDGVERNAMRLGVASEDVYAAKYAFCAAVDEAIL
                     SQPSPLHETWERNPLQLRLFGEHLAGEHFFDRLEELRRQGAARLPSLEVYHYCLLMGF
                     EGKYRLEGTEKLGYLTARLGDEIVYLKGKRHGFAPHALPPDNVRHSLRRVVPLWLPAV
                     VVGCFGIVAFFGMRTYLGHETRQQLAAYNDVVQMPERTAHITITLP"
     gene            complement(1419..2753)
                     /gene="tssK"
                     /locus_tag="QEL58_000158"
     CDS             complement(1419..2753)
                     /gene="tssK"
                     /locus_tag="QEL58_000158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002812677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system baseplate subunit TssK"
                     /protein_id="HDS1674685.1"
                     /translation="MSKVLWGEGLFLRPQHFQRQDAYHEARLQDLSQTLHPYAWGARR
                     VRFDPHALAGGTLRPLDLSAVFPDGETYDAPAHDSLPDAVSLQDLPPGVQSTVVYLAL
                     PLLRDDGANCADAEGTALARYRQANRDTQDLFTDAVEAELAFLSKAVKLLTDDQPRDA
                     YATVPVARVRRTSSGGFELDDEFIPPCAQLQASPFLHRELRAVLDALQAKVDALYGLH
                     RQTSQNIIEFRSGDIASFWLLHTINSSFSALAHLLHHPQLHPERLHQELLRMAGALLT
                     FSNAYQLGDLPVYRHDQPEASFRKLLEIVRALLDTVISTRYFKIALNEIKPSYHLGRL
                     DSQRIDGNASFYLSVSASLPAQELIQSVPVRFKVGAPDDVEKCVLSALPGVKLTHAAQ
                     VPAAIPVRPGSHYFELDARGALYERMLKAQSVMIYVPAGIAELKMELVAVTS"
     gene            complement(2969..3532)
                     /gene="tssJ"
                     /locus_tag="QEL58_000159"
     CDS             complement(2969..3532)
                     /gene="tssJ"
                     /locus_tag="QEL58_000159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system lipoprotein TssJ"
                     /protein_id="HDS1674686.1"
                     /translation="MSGSLTGCASDSKLGKAMDKTLQAVGIREEKPQAPPTVPLRLYA
                     GSNLNAGNDKRATAAVVKIYHLRSLQRFEQAPFNAFLDQAGEQAALGADLLSVNEVVL
                     TPGARQELSEQLSEGSAVLGVVALFRAPAENRWRLAFDTKGKTLPQDGVTIGVHACAL
                     TSDSKALLTRISGDPGSLASIRCAGAK"
     gene            3831..4454
                     /locus_tag="QEL58_000160"
     CDS             3831..4454
                     /locus_tag="QEL58_000160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017356834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HDS1674687.1"
                     /translation="MEVKAMGKAVYRPMFALMMFSGLAACASAPKKAEVVPFETTLSN
                     AEAQVTAGGADAAISAFEVAAKADPTRKEPWVRIAQLQFDQGQYARAIVAAEEVLQRD
                     PNDLVADGVITVAGFRVANQSLTRLQGRGALASDTARKEAQTLATTLRNTMGDAILDP
                     TPKPKPRSRARAGRAVAPAANAQPAATQPAKPAARSNTSDPFQNIGN"
     gene            4485..4985
                     /gene="tssB"
                     /locus_tag="QEL58_000161"
     CDS             4485..4985
                     /gene="tssB"
                     /locus_tag="QEL58_000161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017356835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system contractile sheath
                     small subunit"
                     /protein_id="HDS1674688.1"
                     /translation="MAKKESIQKRLQKIRPPRVQLTYDVEKGDAIEQKELPFVVGVMG
                     DFSGNPEQPLPKVKDRKFVNVDLDNFDEVMEGIAPRAVYRVPNRISDEGGEFGVELKF
                     NSIEDFRPESVVEQIEPLRRLLESRTKLADLRNKLAGNEKLEDLLTDVLNNTEQLKKL
                     GVTKED"
     gene            4989..6479
                     /gene="tssC"
                     /locus_tag="QEL58_000162"
     CDS             4989..6479
                     /gene="tssC"
                     /locus_tag="QEL58_000162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017356836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system contractile sheath
                     large subunit"
                     /protein_id="HDS1674689.1"
                     /translation="MSAEASQLAAQAVETEEVGLLDQIVEKSKVAKSKTEHDRAKDII
                     AALAKEVLDGTVVVSDNLNLTLDARIAEIDRIISEQLSAVMHAEPFQKLEGSWRGLHY
                     LCQQTSTGPNMKIKVFNSPQKDLVKDFKSAIDFDQSALFKKVYEEEFGTFGGAPFGAL
                     IGDYFLGRQPEDMYFIEQMSHVAAAAHAPFISAAGEGMFGLETFTDLGKPRDLAKVFD
                     TVEYAKWKSFRESEDSRYVGLTMPRFLGRLPYNPKDGTTVEGFNFVEEIEAADHSKFL
                     WCNTAYAMGARLTQAFESFGWCAAIRGVEGGGLVEDLPTHTFRTDDGEVALKCPTEVA
                     ITDRREKELSDLGFMPLVHCKNTDYAAFFGAQSAQKPKKYNTDSANANAILSAQLQYI
                     FAVSRIAHYLKAMMREKIGSFASAGNVEEFLNRWIAQYVLLDDNASQEAKAQFPLREA
                     SVQVSEVPGKPGVYRAVAFIRPHFQLDELSVSLRLVAELPASAKKS"
     gene            6626..7123
                     /locus_tag="QEL58_000163"
     CDS             6626..7123
                     /locus_tag="QEL58_000163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006465355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system tube protein Hcp"
                     /protein_id="HDS1674690.1"
                     /translation="MQHAFLSIDTIKGESHDDKHKDWIEIQSFSQDLLQPRSATASTS
                     GGTTAARVNLSPIEITKSIDLASTALNQAASNGTTFPKAQIQFMRADKDGNAINYYTV
                     ELLNVLVHRVTTTVDKEGMPQEVVQLSFGAIKWTYQQQKPEGGVGGKTVAQWSATKNI
                     PNYTV"
     gene            7250..7738
                     /gene="tssE"
                     /locus_tag="QEL58_000164"
     CDS             7250..7738
                     /gene="tssE"
                     /locus_tag="QEL58_000164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017356838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system baseplate subunit TssE"
                     /protein_id="HDS1674691.1"
                     /translation="MKGLEPSLLEKLFDDAPKQTGAGPVFKSVSLEQYKESIARDLEG
                     LLNSRAAFQEGDMKEFPNCRQSLLTYGLADFSAMSLANAYDRAAICRSLEQAVARHER
                     RLRNVNVHLDAGNQFAGGLHFTIHALLDLEPAREPVSFDAMLQPSTLQYQVTRARRTQ
                     AA"
     gene            7738..9573
                     /gene="tssF"
                     /locus_tag="QEL58_000165"
     CDS             7738..9573
                     /gene="tssF"
                     /locus_tag="QEL58_000165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002812662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system baseplate subunit TssF"
                     /protein_id="HDS1674692.1"
                     /translation="MQDLLPYYERELGYLRRYGREFAERYPKIAGRLQLSAEGSQDPH
                     VERLIEAFALLSARVSKRIEDDYPEFTDALLDVLYPHYLRPFPSCSIAHFDTEGVASK
                     LSAPVRVPRGTAVQSRPVRGVPCDFRTAYDVVLAPVGVQQVVYRSVADAPMATTLPAG
                     TGGQISMGFQLLSDQLGFHQLGTDRLRLFLDGEPSVRAALRDALMLGVKAAYVESDGD
                     GRWRRLDSVPLSPVGFADDEALIDFPARSHPAYRLLTELFAYPEKFGFVDLHLPSVTA
                     GASRRFTLHLVLHAQGQDRGNAMVLEELGAHSVRLGCTPIVNLFRTSGEPIRVTHRTV
                     NYPVLADARRAFAYEVHSIDSVHRIRQTPQGELIQAFRPFYSLHHGEDPERTGQYWVA
                     RRDEDIARQSPGFETEISFVDLSFNPVLPQTDTVSLELTCSNRDLPNQLAFGVAGGDL
                     TIEGGSPAKAISLLRKPTKPLRFRHGRNAQWRLISHLSLNQLSLTASGLPALKEMLRL
                     YDLSGSNVSARQIDGILELQQTPVTTWMHGRQFASVVRGLEIRLTINEAHFVGTGVAA
                     FAQVMDHFFALYVHANSFTRLVLVSGDSGEEIVRCPARSGESILA"
     gene            9537..10628
                     /gene="tssG"
                     /locus_tag="QEL58_000166"
     CDS             9537..10628
                     /gene="tssG"
                     /locus_tag="QEL58_000166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019302188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system baseplate subunit TssG"
                     /protein_id="HDS1674693.1"
                     /translation="MPSAQRRIDPGVAQQLLAEPHRFEFFQAVRLLEQVFQRQGVKPG
                     QAVPMRVRFRNSLSLGFPATELSAEGEVYSLKGERLLDREAVEQALHGEELAEVHLTP
                     QFMGLLGTAGALPLHYTETLQLRELYQRDRTARAFLDIFSTRAVSLHYAAWKKHRLAL
                     QYELDRRERFLPLVLSLLGMGMSELRDRLHEGDGEIFDQAVAYYAGAVRQRPVSAALM
                     QRVLSDYFQVPLHLEQFVGAWYRVPPGQATRLGQANAVLGASALAGDRVWQRDLRLRL
                     RIGPLRRDQFDAFLPGGSAAEALSKWLSLLTGGILEYEVRLVLRAEDVQGSALGSASS
                     VRLGWDSYLCTRPQDTSREDTTYGIHTLQ"
     gene            10695..13448
                     /gene="tssH"
                     /locus_tag="QEL58_000167"
     CDS             10695..13448
                     /gene="tssH"
                     /locus_tag="QEL58_000167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012445669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system ATPase TssH"
                     /protein_id="HDS1674694.1"
                     /translation="MSINLKTLISKLDDTCRQAAERAANLCMARGNYEVDLEHLFLAL
                     LEQPQSDFVLIARRSGILPESLERDLNDEISQFKTGNSRTPVFSQHIPKLFEHAWLIA
                     SLDSETTRIRSGHLLLALLTEPDLAQLAYRGSKLFVRFKRDELKHDFAKLTEGSQEAV
                     QTVRFADASAGGEAGEDEGAVPGEAKGGLSKTPALDQFTTNLTQRARDGKIDPVIGRD
                     GEIRQVIDILMRRRQNNPILTGEAGVGKTAVVEGLARRIADKDVPDVLQGVELHTLDM
                     GLLQAGASVKGEFENRLKNVIDEVKKSPHPIILFIDEAHTMIGAGGTAGQNDAANLLK
                     PALARGELRTIAATTWGEYKKYFEKDAALARRFQVVKVEEPSEALAAAMLRGMVGLME
                     AHFNIRVLDEAVTEAVRLSHRYISGRQLPDKAVSVLDTACAKVALGQSATPAIIEDTR
                     KHLDRLQAEISALQRETAGGSDQHGERLAELHAQQAEAQAVLASNEERLGRERDLAGR
                     IAVLRQQMEQGEAASGDPEPSNDDNEGDVAVAKPAAKRGKAKAELSPQHAELARLQAE
                     LRELQGETPMVPLQVDGTVVAEIVSAWTGVPLGRMVKDEIRTVRTLGNLLVERVIGQD
                     HALDAIAQRVRTATAKLEDPNKPRGVFMFVGPSGVGKTETALALADILYGGERKLVTI
                     NMSEYQEAHSVSGLKGSPPGYVGYGEGGVLTEAVRRNPYSVVLLDEVEKAHPDVLEMF
                     FQVFDKGMMDDAEGREIDFRNTLIILTSNIGSSQIMQACLNKPAEEIPGAEALSDALR
                     PVLMRTFKPAFLGRLKVVPYYPINDDVLAQIITLKLGRIRDRVIANHKATFSWDDSLV
                     EAVLARCTEVDSGARNVDHILNGTLLPEIAESVLAAMAEGNRINAIKVTAGKKGDFKY
                     KVS"
     gene            13472..13822
                     /locus_tag="QEL58_000168"
     CDS             13472..13822
                     /locus_tag="QEL58_000168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008268344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674695.1"
                     /translation="MEFYGFDREAALNHCDSLELGLGRELDRVRAWNRLRPEHVIELL
                     DTAVPAARQDARNVAAQISRGSWRIHMDAPVVGKPQLVSNVRELQITAGGRDYRLKIS
                     EGVRLQLEEIVQAA"
     gene            13942..16653
                     /locus_tag="QEL58_000169"
                     /pseudo
     CDS             13942..16653
                     /locus_tag="QEL58_000169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014503453.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system tip protein VgrG"
     gene            16870..19791
                     /locus_tag="QEL58_000170"
     CDS             16870..19791
                     /locus_tag="QEL58_000170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002801754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein"
                     /protein_id="HDS1674696.1"
                     /translation="MATGNFRLYYLADNGQQRPAAKVRYRILQLPDRNEVVNGTTDAQ
                     GLTKFVNTTPNPLQNPLDKGVKPATQVPFLPPSTIRFQLEVWDFDQRKWAQPDFAGRQ
                     KKAVSHDIELQLNSTIMTMAPIQCALELQPYFRVKFQMQADQKALPNAPYLAYAVDAK
                     GREVAGNDAAGRPIKGNTDKNGMTPRITCNGRRRFNFNLPGSKVGRNTDMLEPLIKGQ
                     STTLYVLGMKSQVAMSESGQGRTARVDGKISAPAVLNAEARELLLLTPDVWNEFEELS
                     GMIENTMAGLHRSRANLDNALQGRDAEAVAAAEKALGIAEDNVAKMLNDNFSKLTDLK
                     EVVTFETYDKGRHAGNGSLADRSGLRRRYIPAKKYEELKKRRIMGIPTAVNTSVGTKV
                     KGGPVSGSSEGKHEVTGTKPFDAADFKKSIRSITLQAKAETKMDPFVFDIIDAGGNEF
                     VEHVQKSDSYEVASASQWLRFVAGAGASSAATWNPSKGVAAAKAEANASAKLILFEGK
                     WTHSYSVPSIKGWQMQFGDVDLGAIVFVLACELYGFVGAKGTLAGSAEIKYVGKKPVA
                     TAQQRDRSQSLAENFDSQRGLPRAQLDPARVRMLGMNESAPKGSGAGVQLTAEVFAGV
                     EGGITPSGDLRWLPPDRKEPVSFAKIALDVAVNAGAGASAQLNIYFNSGKFRIRASAR
                     LCWGVGAKGAVDFAVDAGGMQEFVKWVFYQLAHSGFIKLTYIAQDAFNVLSKLLFMVV
                     AEDSPMGVLLSENIAAVNFEFNALQNRLKKAAARDALVNRINSKPDWLIYATPEARGM
                     LLYAVTRHYPESHARNLPEFSPGWGDIEIHALPGHKQAVLNILQPVTSRPEWMNVMQH
                     MTIDGARRPDAGKAEGDVVRFLDYGYSLNNDLPSVFGTMNKHSRDKVGDVGNSYLQSF
                     LEKRSKLLNEFPKGYEVAQIMMIDDPVQLAALDGSEAPTFAMMDPPGLWLDRDDKTMM
                     A"
     gene            complement(19837..20808)
                     /locus_tag="QEL58_000171"
     CDS             complement(19837..20808)
                     /locus_tag="QEL58_000171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012444334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SUMF1/EgtB/PvdO family nonheme iron enzyme"
                     /protein_id="HDS1674697.1"
                     /translation="MIPPTLLESGDSKKELNVRSYRLWPITILALLPLAPSACAGKSA
                     NSAPQVQGSADASASLQQQITQDLIRMKGGTFLMGDFGPVHNVDKLPYSGETNDDVLR
                     KVTLSDFAITAHKISVEQYDAFSDSTGRPRIGTSDIDAGLYRKDVKASAGVSWTQAQE
                     FCAWLGSTTGKRATLPTEAEWEYAARSGGKMVIYATDNGQIDDGRNVASFDQNMDGSG
                     VALGRYPPNPAGLYDMIDHGHEWVQDWYEASYTGEDLRDPQGPKKGSEKVIRSSTNQG
                     GDSLALVSMTFARTSRAPDAAKRKDPKGRDIQANQNYGYGFRCVVRD"
     gene            complement(21464..22375)
                     /locus_tag="QEL58_000172"
     CDS             complement(21464..22375)
                     /locus_tag="QEL58_000172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017357019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SUMF1/EgtB/PvdO family nonheme iron enzyme"
                     /protein_id="HDS1674698.1"
                     /translation="MSTLSPRTAALLAILLLTTSACAKAEDSPSEAKRGPGTATQQKV
                     VSDLVPIKGGSFLMGDFGPVHNEDRLPYSGAMNDDVLRKITLDGFSIMAHKVSIEDFD
                     AFTDATGRPRVGTSKIDSTLYRADPKAAAGVKWQDALDFCTWAGKGSGRKLTLPTEAQ
                     WEFAARSGGKMVVFATDTGSIDDGRNVASYSQYDDGSGTALGKFPPNPAGLYDMTDHG
                     FEWVQDWYEENYSGGDARNPTGPQNGIEKVLRGSSKRGGDSLVHTSMTFARDHRPPNP
                     PKFKDTDGSEIDSNQNGSHGFRCAVRY"
     gene            22540..23490
                     /locus_tag="QEL58_000173"
     CDS             22540..23490
                     /locus_tag="QEL58_000173"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674699.1"
                     /translation="MYTGWMRDFPVGRPLSPQERASRFNVHAAQSVAPAEHACLVRFN
                     STCIELIDRRFRLRGMVSTTVVLLGTLGLFLLGFFLLFTLVIPNLEGDIWDWVMYGMV
                     GACVVGAPALFWHITLRYEFFTYVWYPTRFNRRNRKVYFFMGGKEGAVSVPWDEAVFY
                     IGRGTSEEFLRDLRCSVVEDHVVKRTFAVGHYFDDELKIRGIWEFVRRYMEAGPAEVV
                     DTIDGRQMNLSVKPSLRNCYLFVVASLGPAMLSARFMLMPLLLPLVLCRWLVLKSCRV
                     PVWPQWVQDECEIDANDPLRLAEPEVMAQSEWDRRSTRSG"
     gene            23499..24548
                     /locus_tag="QEL58_000174"
     CDS             23499..24548
                     /locus_tag="QEL58_000174"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674700.1"
                     /translation="MSQFAGWLAQRYRNNRFLTGYEVAADVRNFDASALMPLDKGVVY
                     LGDNCIEYIDRHFLYRGWAVMWGFVVISLVLLFVSAIAHATVTMQAEGKSVSPEMAVT
                     VAVLGVLLLGLVAFVYWMLLGRDIFRHQYYPIRFDRTTHQVHVFTGGRNRVISAAWSD
                     IRFIIGRDKPAGPGEDYTYDLRGLVMRGDQVVHTFAVGSDCGSNPAVVLAHWEMIRRF
                     MEQGRSALPFPPLQLYTSVVPSFRNAFIIHVSSAGAGLMWIALPFTLPWALFRFLAMK
                     LCRKPAWPAAVTRRGTSEPSDTPPLRAPAVYGRVDHAGGRADQMERFWKDSIAAAKAR
                     NDEVRQQLLQATSRV"
     gene            complement(24636..25319)
                     /locus_tag="QEL58_000175"
     CDS             complement(24636..25319)
                     /locus_tag="QEL58_000175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674701.1"
                     /translation="MGIGAVVVAIAGLAAWGFSGSSDYPEPSEYSLTPDPAHATGHPD
                     IPAGAPRDGAAMIVDAPATAGEPALPAPAADTAPASADAASVAAAPSAATAASGAAAR
                     SPAPAARASRAATQSDAKSKGDENLLGTLLGIIKEEDKAKAKTKANAQPQSMDDLIAQ
                     IEADQRKRTEDERAAFERVASKKSASTESNIQAQLRACPSPASLKGVDCRRRICAAVS
                     GKDPACPAM"
     gene            25598..26476
                     /locus_tag="QEL58_000176"
     CDS             25598..26476
                     /locus_tag="QEL58_000176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002801819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M15 family metallopeptidase"
                     /protein_id="HDS1674702.1"
                     /translation="MPIVVAAIAVVALVAAVCWVLLFPETVESLRQALSRRLGGFRRK
                     AGRVGDKVGHGVTRVRSGVREEAGAAHSALRRHWPIMAIAAAALLIPPTVILITRQTV
                     VLEDFRGDDLAESSSMVAQLLRGERLTPPPPPPPEVFTTAEVRRLRPEIVTADRKWDQ
                     IDADLQQRVLAIYEVMRRQYGYEMVLIEGYRSPQRQAELMAGGKATRAGAWQSCHQYG
                     LGVDSAPIRDGKLQWDMNDEWTKRGYFLYGELAEQAGLDWGGNWRSIKDYVHVEMTAR
                     CRAARAAKREELSRQG"
     gene            26579..26839
                     /locus_tag="QEL58_000177"
     CDS             26579..26839
                     /locus_tag="QEL58_000177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003471049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAAR domain-containing protein"
                     /protein_id="HDS1674703.1"
                     /translation="MARPFIVVGDKLSHGGSVVAGTGQTDINGKAVARVGDRAVCAVH
                     GATSIVSGDATVVIDGQPVARDGDRTACGATLMASQATTGLR"
     gene            26882..28318
                     /locus_tag="QEL58_000178"
     CDS             26882..28318
                     /locus_tag="QEL58_000178"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674704.1"
                     /translation="MAGWLGKAASVVMVFIATWGATILYWRNSGTVPTGMQMLAYLGL
                     LPVGLSGAGFMLRNAARRGADVALQKAGEDRSGPAPAERESVAGAPSGVPAVALLAGH
                     LRLGMDLDAQALLAAAAAPPRPVLDGRFRDNYNLPVRMSAAPDLDEFEVLQVRQDGID
                     TAAHERRALALLRPVLERLLEAAFTALPEIEASEEVVVAGLRRRDEQRVENVLTLELL
                     VPGSWSDGLRPWVQEWLQQQAHDAGLDARRFDVRMTVLDGAREVWPHVQRVIDALASS
                     PTPRWHLLLAAASSIDAGIVSAWQSAGVLATAQRTDGHVPGEGAAGVLLASQAAAREG
                     DARLWRPQLVSAEQVEGQRPAEQRRQLAALATQWHASLATDGAQAQFVLHDADHRGDL
                     MVDAAAIAATLAPDLDFSPQSLALAISAGELGPALPLAQLALAHAQLQRQSEPVLLLG
                     VADNQQRLFGLVDPLPSPTLTAEAPSAP"
     gene            28334..32041
                     /gene="tssM"
                     /locus_tag="QEL58_000179"
     CDS             28334..32041
                     /gene="tssM"
                     /locus_tag="QEL58_000179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008267670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system membrane subunit TssM"
                     /protein_id="HDS1674705.1"
                     /translation="MSLSNFSYYLRDYRLWMVIGLVGAAALAHYGEAEARQIGIWVAI
                     VLAGLLVLALLVWVVKRMLARRAAKRVEAMVKDEADKAVASAQPAQRADTEALRTRMM
                     DAVKQIKSSRMGVLKGNAALYELPWYVIIGNPAAGKSTAILNSGLQFPFEDNRGNVVQ
                     GIGGTRNCDWYFTTNGIVLDTAGRYSVSVEDRLEWLTFLGLLKKNRPRAPINGVIIAA
                     SLAELSGSKPEFAIELAKNLRQRVQEITERLEVFAPVYVLFTKADLIAGFSEFFRNLD
                     PGEREHVWGATLPFDVQQQGDALAAFDSHFDELAEGIKEMSLTHMAMQRGREVSPGLL
                     SLPLEFVGIKPALRTFIATLFEDNPYQFKPVFRGFYFSSALQEGRSVHHASERVGRQF
                     NLERGSNVDEAPTGHTAFFLKDLFRKVIFADKELVRQYSSPHQNRLRYGVFLGAVGVL
                     ALALGLWTWSYTTNAQLVANATKDLDQAVRVQKDRMDLKSRIDALLLLQDRMEQLDRY
                     GKEGGITTHLGLYQGTAIREKLLREYNHGMQQVMLAPTVSNLENYLGQVVAERDKLGQ
                     GTSSAAESEVLYQNASPTSTNDAYNALKTYLMLGNPKYVEGAHLSQQLTLFWRTWLEA
                     NRGQMSREEMVRAAEKLMTFYVAQAGQPSWPQVQNKVTLVSDTRQALGQVMKGQPAME
                     RVYAQIKARAGARFTTTTVDSLIGVERNGRMINGNYAISGAFSRKAWEEYVQDAIKEA
                     ANTQLSTTDWVLGTTEQSDLSLAGSPEHVSRELVNLYKNDYAREWTRFLQGLSVAEFS
                     TFDEAVARINKLGDASNSPLRVLLERINEETVWDNPQALARSSKARKGFVAWFQRTIL
                     RKDPAAAAAAQPVGPIGKAFEGIARLTSERGDQPAVITAYFDTLAKLRARLNAIKSQG
                     EIGVATRKLMQDTFSNEGSELSVGLALVDEQVLTGLDEKQREALRPLLLRPLTQTFGT
                     LIAPTENEVNKTWKAQVYDPFKARIGQQYPFNLNSDVDAAPSDIAGIFGASGSIAAFN
                     KEALGTLVIQRGPLLETRRWAGQGVNLSAELVANYGNWVSGSAAGAAQDTTIFEILPA
                     PAAGALEYTIEIDGQVLRYRNTPPQWTTMQYPNVGQVPGVKITAVTGDGRTVEVFSAP
                     GSNGVNRLMGAGQVERLDDSSRITWTGNGVSVPVEMRIVRRAGEAAQGGGDWQRGLQL
                     PERVAGGEPAAQAAPAAAPAATPAPATGGAR"
     gene            32038..33021
                     /gene="tagF"
                     /locus_tag="QEL58_000180"
     CDS             32038..33021
                     /gene="tagF"
                     /locus_tag="QEL58_000180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011259979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system-associated protein
                     TagF"
                     /protein_id="HDS1674706.1"
                     /translation="MSRVVSAGVSYFGKVPSRGDFVRAADNHQLLGWLDRWAGESLEL
                     LSQSPDWKQRYDEAPEIHYAFLGSRSKMVLCGHFLASRDASERRFPLLSALRLDAPEP
                     LPFIGRSPLAMSNAWSGLARLARQAYQDSDAAQALAQLADARFSISTDPGDYNGSFQD
                     FLENTTVADLEQRLRESGHGDVALRQVLPALGLLLQPVLSGGDVNIDKALVFPLVRDP
                     AYRPLVAAFWLDLLSSFVARGDFELAVLIRNDAAPSMIVGFNGADRQVLRAVLDPAEA
                     GDFLIRIQHSEWVDDYLRGDYNLNRFGSFLDRDDLALATARKLFGETFLGT"
     gene            33051..33803
                     /locus_tag="QEL58_000181"
     CDS             33051..33803
                     /locus_tag="QEL58_000181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008268089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HDS1674707.1"
                     /translation="MLPLLLVAAPLAAQNAPAVAAGERPVVIEGVVPDQATKAKLLNN
                     LRAVYGAERVVDRIQVETIATPPNWGDYVSGMINPGLKRVSPGKLEVNGQAVRITGEV
                     GNEALRQQVASDLSLASNTSYTVTNALKVGSQQNVLDQTLANRIIEFQSGSARLTPFG
                     MSILDEMVAKMAQMPDSRFLIIGHTDNVGQRESNLTLSHARALAVKNYMMSKGIPGSH
                     MDVLGKGPDEPVADNTSNDGRARNRRIEFKIQ"
     gene            complement(33849..34907)
                     /gene="tssA"
                     /locus_tag="QEL58_000182"
     CDS             complement(33849..34907)
                     /gene="tssA"
                     /locus_tag="QEL58_000182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003471063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system protein TssA"
                     /protein_id="HDS1674708.1"
                     /translation="MLDQEALLAPISENAPTGEDLSFSAEFDRIIENRRADDPTLDQG
                     AWQTDIKYADWSSVLREADSLLQTRTKDLRLAGWLSEAATQLEGFQGLAAGYRVTAGL
                     CDRFWDEVHPQAPDGDFEERIGNLSWLLTNSLQWLRAVPIIVAPQGRFSLTDFEHAHA
                     RANSGEDDDGRPGLDILTAARRDTQHGFYRQLADDLPDCSQALAELQAAVDNRLGLDG
                     PSFSAVREQLEHLQRTVLRFAREAGVLLDGETGAVEDPFSDSHFAEDAPTFETTPAAP
                     SRGPAGAPGSRKEALQQLRQVAEFFRRTEPHSPVAYLAEKAARWGEMPLHVWLKRVIK
                     DHGTLEQMEEMLDVNPED"
     gene            35163..37925
                     /locus_tag="QEL58_000183"
     CDS             35163..37925
                     /locus_tag="QEL58_000183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008264699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system tip protein VgrG"
                     /protein_id="HDS1674709.1"
                     /translation="MTQVAGLGDAQRLYRLQSEAFTGCTVERWRGRDALGEHAWTEVE
                     VLCTDAGLELGALPATRATLITQLADGGQWQRSGLVADAARVGGDGGLVRYRLHLVSW
                     TWWLQHARHSRVFQEQGIRAIVDAVLSAHADIARWRWAEGVDAFLGERVRSYCVQYRE
                     SDLDFLQRLLAEEGLGWRLYPDEEAPCGNGLEIFADSVALPEDATSAGAGVRFHRSDA
                     TETSDSVQAIGLHRSLASTTVSLQSDDYRQVRALSGQSPMEGGGSGSTREDFDAVGAY
                     AFSDGAAASRQARLQAQAREARSRRWQGHGTVRGLQSGSWLRLQQAPGGTPPELLLVA
                     VDHAGINNLPTDLRRSLDDALGVAPGDSADAALWQQAEAIGYGNRFEAVPRATPWRPQ
                     LLDGTGARLNPRPTVPGYQTAVVVAGHGSDSKDLHADSHGRVRVRFHFQQEQGEGAHD
                     SAWLRVAQRYAGPGVGSQFLPRIGQEVLVGFLDGDIDRPLVLGALYNGRGEAGVAPTP
                     AGASSEGDVSAYGQAGDARHSAQANLSGGQAPAWHAAGAGDQAHRQGGALWGIRSREW
                     DGGEGSNHLLFDDSNQQLRAQLASSQQVSQLSLGHLRHQADNYVGSVRGTGFELRSDA
                     WGAVRATAGVWFTAYGHRSTAPAGEAVQPAALLTQLQALGERFTQAARTHVTSPLAMQ
                     EGAKAAARSRMVADKSPVPGLLASVRTTTGGDDFGAGKGSAAERASEAGEGRVPHSGD
                     PLLGMAAPQGVVQVAGQAMHWSSGEGLLLASGSHSEAITMGQARLHAGQAIGVLASVV
                     EGAAAAPTALDVVAGSETLDIQAHADLVRIQSRGALRGASAQAPVELAAANTIHVATS
                     GGASLTIAGGSITIACPGTITVHAGSKSFVGPAQQGYPLPQFPRSSCKSCILDAMRQG
                     TPGVLV"
     gene            37925..38806
                     /locus_tag="QEL58_000184"
     CDS             37925..38806
                     /locus_tag="QEL58_000184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002801745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4123 domain-containing protein"
                     /protein_id="HDS1674710.1"
                     /translation="MNRYAVIDSAQRPHFHERLERLGAHYRSLFEGTAEASLLDIAPL
                     LVAWQDTAVHTRLDAEIRQMGTQRPGVTLLWSALDLDELAKRLRTFHLVKVPEKGGRE
                     MLLRWYDTRILPALLELLVPAQRAALLEGVQRLQYFDRYGDLQEWPLAEVDDAGLPAL
                     PPLRLDQQQYMRLLDACEPDVAIAQLRRVIPDEMKRVPYRSLYPFVVKHMQDTIAHGV
                     DQVDDHVQYLLLALYTSGACREHSAVRARFSQGASAFEASFPDWASALPDDIWLMGVP
                     LWEAPTALPAEAATPLN"
     gene            38919..39296
                     /locus_tag="QEL58_000185"
     CDS             38919..39296
                     /locus_tag="QEL58_000185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008264788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3304 domain-containing protein"
                     /protein_id="HDS1674711.1"
                     /translation="MLGYNHNDAYIAQFLVNGGSGGSADSHSEGGTVCCAMLPDRWTP
                     DMKVEIEWTTDLETFQKATVAVPKYDQPGNLAVHFLRNGQVKVFVTGLVLGHPDYPLT
                     GPEAPLREGENPVWEHLRRPLES"
     gene            39547..39924
                     /locus_tag="QEL58_000186"
     CDS             39547..39924
                     /locus_tag="QEL58_000186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008264788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3304 domain-containing protein"
                     /protein_id="HDS1674712.1"
                     /translation="MRGYNHTDQSIAQFQVNGGSGGSARRHSASGTVCCAVVPDRWTP
                     DLNVEIEWTTDLETYQKATVSIPRYDEVGSLAVHFLRNGQVKVFVTNLILGHPDYPLT
                     GPEAPLREGENPVWEHLRRPPAG"
     gene            40030..41829
                     /locus_tag="QEL58_000187"
     CDS             40030..41829
                     /locus_tag="QEL58_000187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008264907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2235 domain-containing protein"
                     /protein_id="HDS1674713.1"
                     /translation="MPANGQRALSGAEAQRRAKAMACLREKGSQCQGQVHVSIYFDGT
                     GNNREWEGTFVTGKTRATRTQLARNGHSNVARLYDANLAEPENGFFSVYVPGVGTPFS
                     EVGDTNQDGDTLGGGAARYGADRIHWAILQVINSVHQYLKSNDLITPAEAKILVGSMS
                     ETRLLEGMTRRAMLTGIAQRLERVVKSHQRRVTSVHVSVFGFSRGAAQARAFVHRLYE
                     TAEAWGSGCGYNIAGVPLYLNFMGIFDTVASVGVAAMSRVSKGKWDWAAGDMMSIHPE
                     ARQCVHFAALHEQRINFPLDLATSGKEVLYPGMHSDVGGGYSPGGQGKDFVSGAANGK
                     AKLSQIPLIDMHHEAIKAGVMMETITELNEDPAYATHFGCHPQLIRDYNAWLTGHGVP
                     AGAHTQQITGHCRQYVAWKGKRLPNGPQSLLQQPFFKQSDAEDQVDLANAQRDFANLV
                     TELAQGKSDMAAYRRQLDESQKRMDAGRKAGRPVFEPTPRASAAAYTYAGIPAETSTL
                     LDLVLNATPVPDVSTNLFDNYMHDSLAGFYMMKWTELNIPRLNTYGYLRYREVFSVAG
                     RRAQECRDPATLPPANIPSIGGAFQQLGTAMGG"
     gene            41839..42432
                     /locus_tag="QEL58_000188"
     CDS             41839..42432
                     /locus_tag="QEL58_000188"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674714.1"
                     /translation="MAGFVSRAALAAAGVLLSASCHAQPPDVGGWRRVSDSDYVRHFH
                     FSMLPHAAPVGSRWAIYDARAGRVVCCLSVQGAEVSESELQDRLHIPGPWVTDLTNGW
                     NLDAAPYRPHVQLLKAQDAMGSHTFREEGDAAGGLLLPPDARVVGADALEIAGERYTV
                     QRDETSLADGDGGVHTYTLKPARGGAALRVEVPFGTY"
     gene            42566..43183
                     /locus_tag="QEL58_000189"
     CDS             42566..43183
                     /locus_tag="QEL58_000189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="decarboxylase"
                     /protein_id="HDS1674715.1"
                     /translation="MHNWIAPAAGALMVALCLAAPAAQAAEPTFGGWRNLGSRDGAEP
                     ALRDVPFALLPVPASRDARFAIYDRESKRLVCCLQVASAELDDTALRKVYQLPEQWVT
                     DLRNGRSTARPWPTRVYEMRRTDELVDYGFSDAPEAYSDLGGLLVPANARLLPDGSVQ
                     AGSTYRLQFRSTPLGDDSSALDRFTLQPAQDAGKPVVVEVSYGTY"
     gene            43357..44130
                     /locus_tag="QEL58_000190"
     CDS             43357..44130
                     /locus_tag="QEL58_000190"
                     /EC_number="3.6.1.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008267258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol diphosphatase"
                     /protein_id="HDS1674716.1"
                     /translation="MPRLLLLLSLSALAGCASAPPPPAHSDALWRLIERDCRGAEGPR
                     GDCLQVEAAVDRRDVLVKDAHGDYQFLLMPLDKLSGIENRSLYRRGAPNYFAAAWQAR
                     GHTERALGQPLPRSVASLALNSPHGRSQHQLHIHIDCLRADVLQALDAQAAALGTEWA
                     PLPVLLRGHRYQARLLPGAELTANPLNLLAYGLAGVDDVGQWSLVVAGRDRVQGGPGF
                     ILLATRVDAETGNEASGEELQDHACSVLTGAGDVLERVR"
     gene            complement(44127..44726)
                     /locus_tag="QEL58_000191"
     CDS             complement(44127..44726)
                     /locus_tag="QEL58_000191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019337893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDS1674717.1"
                     /translation="MISPYPTPALPPLRPVLRRHLLQLQVAPITLRPFQRTDLPRWRL
                     FDDRRQRGRHPPSGIDEEARFLAHMHRSRLEQDNDQLLLGVFDDEHGTVLDQLHIRLQ
                     SQEARCVELLSLQHGHPHVDAMLQALCPFLFDGVGLHRLFVMLPPDGNTPFANALHAF
                     GFNLEGLLRDHHLDMDGWQDRQLWALTAPTWRSGLQVAD"
     gene            44938..47664
                     /locus_tag="QEL58_000192"
     CDS             44938..47664
                     /locus_tag="QEL58_000192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDS1674718.1"
                     /translation="MSASHKALRPRPLVLALSSLMLVSSPAFAQESAPTQLQEVKVTG
                     SRIPRASVEGPSPVTVISREQIDAQGYRNAFDALSALTENTGNVQGEDFGNTFTPAAN
                     TINLRGLGPNRTLVLVNGRRQSDYPLAYEGSVNVVNLANIPSALIERIEVLAAGASAV
                     YGSDAIAGVVNIILKDHFEGVDVNVRAGGTQQGGGDNQRVQVVGGGSGERWDGLFGFE
                     FDVRKAIHARQRDFMDSLDDDPTGKAPQATAIAYRRNAATGRNIDPGTNGCDPASGIY
                     GGSVFRAFNPRQGWYCGSNEAAASYWTVQTEKRNLNGYGLLTFHVNETTDLFADLAVG
                     SARITNNTRAPTWTSARNYFYNQTTGNLESWYRRFAPEEIGGLPRNANRFLENSWSFN
                     VGARGRIGDSDWDYEAVYSRSRYENRTRRPVLLAGINEYLLGPKLGVRDGVEVYAPDP
                     ARLFKPLTPNEYEGLSDYQESRNAAWLQTFSASINGRLFALPGGDAALAAVVEAGSQG
                     YRNRPDPRLGSGEFWNTSAGIGAGGERDRYAAGVELQLPLLKSLTTTLAGRYDQYRAG
                     GEHLGKATWSFGVEFRPIESLLIRGTAATSFRAPDMNYVFATETRGYNPGMTDYWRCR
                     TAGQSYDNCDYNGLSIDYSNRANAQLQPETAKSYGFGVVWSPLAGLDFSADYYDIRID
                     NEVTSLDTSRILRDEADCRLGRTLGGEARDIGSPLCQDALSRVIRNPSNATVQPDQVT
                     RVLINPINAASESVRGLDLKGNWRFDAGRYGRFTTRLAYTVVLEHTYRQFSDDPERDI
                     RNSLDDYQWRSKANGSITWNQGDWTTTLYGNRFGSLPKSDGSGRMGPYMTYNASVFRQ
                     FGDNLSVGVIVNNLRDSRPPADRNGGGWPFYPVGNYDPYGRQYWLQLDYRFR"
     gene            complement(47747..48391)
                     /locus_tag="QEL58_000193"
     CDS             complement(47747..48391)
                     /locus_tag="QEL58_000193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674719.1"
                     /translation="MGPSDRHDRLRRWQAASLLAAAPIASLSATDAAATAPLQAPPGQ
                     QRIAPAALVERLHQRVLSGQSATATLEHWCAEHGLAEQARVRAVRVRGQDKPAPADVL
                     QALGAAQSGTGLRYRRVQLVCGSRVLSEADNWYLPGHLSPAMNDVLDSTDEPFGRVVG
                     PLGFQRQTLADQTFWPPRGEGDHGVILEVRALLRDRQQQPFSYVIESYLQQALP"
     gene            48577..49737
                     /locus_tag="QEL58_000194"
     CDS             48577..49737
                     /locus_tag="QEL58_000194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014647483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HDS1674720.1"
                     /translation="MTLQFVHGGVDRDGAPLHFHIRNGRISGLNAEGTPREGAESVDL
                     SGFAVLPGLVDGHIHLDKSFVGDRWHPHQPVNSLRERLAVEKAAVAGAAPMVDRAEAL
                     IRQCSGFGTVAMRCHVDIDGSTGLRHLDAVREAALRCADIVRIQLVAFPQAGVMSCPG
                     TAAVLEQAIAAGVEVLGGIDPTTLDGDAEGQLALLFGLAERYGVRLDIHLHEPGETGL
                     AQLLRIAARTRAAGLQGRVAVSHAYSLGEVPLARALQVGEALATAGVAIMSNAPGDHP
                     FPPLRALHDAGVRVFAGNDNIRDCWWPYGNGDLLQRAMLLGYRSGFYTDADLMLALDM
                     VTTHAAQVIGLPQYGLAEGLPATFVAVRADHGPAAVAAVPVERRVVVDGRWL"
     gene            complement(49782..50219)
                     /locus_tag="QEL58_000195"
     CDS             complement(49782..50219)
                     /locus_tag="QEL58_000195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3806 domain-containing protein"
                     /protein_id="HDS1674721.1"
                     /translation="MSDEIPARFDPLPAALQTHLQHQRSLIAARVAAGFPSLPVQWPL
                     PASTLQRVVDAELIDRDDGDGWEALGVAFGDTLAQRVPGLAWMQVTDAWGIDAVLRYA
                     DSSLQIGASTLLLKRVEQGEVIDIAHLLAWLEEFVATRADDYV"
     gene            complement(50352..51233)
                     /locus_tag="QEL58_000196"
     CDS             complement(50352..51233)
                     /locus_tag="QEL58_000196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDS1674722.1"
                     /translation="MPDSAKSNRTLFELDLLRALVMVADCGSFTTAATRLHSTQSTVS
                     QKVRRLEELAGHRLLERGHRDVHPTDAGHTLLGYARRMLDLNEEMAQALAGATVETAV
                     RIGVPEDFVNAQTTRMLAAFSRRHPQVKLEISSGLSRDLAHGFDHGELDLVLVKQRRN
                     TRQAVHCRREPMHWIDSLRSSCLQLDPLPLVTFPPRGLYRDEMIHAVEALGLRWRIAF
                     TSSSLSGIQGAVADGIGISLLPRRAVMREHRIIDGERDLPVIDNYEIGLLHRADADDA
                     VRALAGELWRQVQREPD"
     gene            51356..52054
                     /locus_tag="QEL58_000197"
     CDS             51356..52054
                     /locus_tag="QEL58_000197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019337887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ankyrin repeat domain-containing protein"
                     /protein_id="HDS1674723.1"
                     /translation="MRIHRCRRWPAPLGRLLLLCLLAMAIPACSATAGSPDARLRDAA
                     ARGDSEAVRAALEEGADLDARDGQGRTALLLATHGNNVDAARELIEAGADVNAKDALQ
                     DSAYLYAGARGRNEILAMTLAHGADLHSTNRYGGTALIPAAERGHVATVRTLLRAGVA
                     VDHVNRLHWTALLEAILLGDGGPRHVQIVQLLLDAGADPERADGDGVTPLAHARQRGY
                     TDIEALLRQYGAVR"
     gene            52106..53563
                     /locus_tag="QEL58_000198"
     CDS             52106..53563
                     /locus_tag="QEL58_000198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019337886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HDS1674724.1"
                     /translation="MFRFHLLSLAVLVAVAPLSAAAAERADLLIRNATVVDVEHANTL
                     PGQSVVIRGEDIVAVGPDAKLRSQWTTARQIDAKGKYLIPGLWDMHVHFGGGPALIEE
                     NKALLPLYIAHGITTVRDCSGDLPEQVLQWRGEIAKGTLFGPRLLSSGAKIEGIKPVW
                     KGTIEVGSEADVDRAIARLQHDKVDFVKITDSTLKPELFLYSASAARKAGFKASGHIP
                     MALTVEQAVDAGLASIEHLDYAFKAGSKDEAQIAADFGAGRIDRAEANRRLDASFDRD
                     TAMHAYRDFARRGVFVTPTLNGGRILDFLDQDDHANDPYLAYIGPGLRATYQWRVDRA
                     AKATPAQIEARHAQYHQVAAVLPLLQEAGVTIIAGTDAGFLNSYNFPGIALHQELQLF
                     VKEGLSAPQALSAATRSGPAWFGQIDRYGGVAIGKAADLVLLTANPLQDIAATEKIDS
                     VILRGNVYDRAALDRMLAETRAKVAAWNAETAKAN"
     gene            complement(53697..54350)
                     /locus_tag="QEL58_000199"
     CDS             complement(53697..54350)
                     /locus_tag="QEL58_000199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014647476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDS1674725.1"
                     /translation="MTEIPAPIRVLVVDDHPLLRDGLAALLGAQADLQLLGEAADGEE
                     AIACYQRLHPDVVLMDLQMPRLDGVEAIVRIRALDPRARIIVLTTYRGDVRAVRALQA
                     GASAYLLKDMLRHELVDTIRMVAGGRRAPIPPAVAASIAAHVVEDRLSPRETEVLRHV
                     AGGLSNKRIGERMQISEQTVKAHMKSLMDKLGVGDRTHAVTQALRRGIISLDDSGHD"
     gene            complement(54343..57372)
                     /locus_tag="QEL58_000200"
     CDS             complement(54343..57372)
                     /locus_tag="QEL58_000200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005417010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HDS1674726.1"
                     /translation="MPAMRGRPFPFQHRLPALLACLLLLISLQAFAVQRPLLSSGLPG
                     YEHTAWRVGQGAPGDIWDISQDRDGLLWLATGSGLYRFDGRRFERQPAPVGSAFPSSN
                     MVTLAHGSDGALWIGYFQAGISQLARGQLHNYGRGQGVPVGVVPHFSQARDGRLWAAI
                     NGGLRWFDGQRWQPLPSGSGVPEHRVQWVLHDSRGTFWVLADLKVWMRASGDAVFRDT
                     GIAVSQMASLAESPQGEVWLADRVRGTSPLANAQGLMAEHEREARRLPDLVAARLQFT
                     ADGALWATMSPHGGVARVTFQGDHAVRMERFDSPHGLTATSAVPIIVDREGNLWVGTN
                     LGLNRFRARSVHTLTAGPSDPYRSLVRASDGRVYGYGEDLKLYDLRRPLLDGNAAQLQ
                     TAARQAPTPVWQFDWVNLARTVAGHTTLIPLPAPFTGQPLHALLFADDEQAWVCSGEH
                     GVLHYRHGQWRRETRLPELACSTLALDHEGQLLLGYADGRLRRMRSTGIDTFDTTQGL
                     AVGPVTALLQHQDLLLVAGEAGLAARVGNGPFVPVRTDMAGVLEGITGMVADARGHLW
                     LNGSRGLVRLQSSQLRGALRTGMQVTPRLFDAVDGMPGIALQSGPIATAALADDGLLW
                     LATNQGLAWLDTTRSHVNMMAPSVRIGEVLYGSAHQPLHDGLRLPAGTSQLQIDYVAL
                     SLARPERNRYRYRLSGVDDGWQDAGSSTRAYYTNLEPGNYRFEVEAANEDGIWSTMPA
                     SRSFRIAPTFMQTVWFKLLCAAAILTLLVMAVRIRSGQLAALFRARLQERHGERERIA
                     RDLHDTLLQGSQGLILRLHAISQSAQTPAPVRSQLESAMQLAERNLAEGRERVNALRD
                     GPFADRDLASALADVHAEYAGKGTNPLRLTVEGAAPPLQADAAEEVFLIGREAIRNAL
                     RHADASAIEVELSYGTRCFLLHVRDDGVGIADENAGHGHWGLQGMRERAQRLGAELQL
                     WTRPGLGTEIALAVPARRLYHRLPSRWRWPWSTPKHD"
     gene            57469..57801
                     /locus_tag="QEL58_000201"
     CDS             57469..57801
                     /locus_tag="QEL58_000201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005413754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674727.1"
                     /translation="MQRLFVMFPDRAPGLGLLWLRLWVAAALCMPAAHAGEWSIPGLV
                     VAAMLVLGALTPLAAVLATLGLYLLAQPWALAPLPLALLLLGPGAYSLDARLFGRRLL
                     GRRPPPFG"
     gene            57852..58295
                     /locus_tag="QEL58_000202"
     CDS             57852..58295
                     /locus_tag="QEL58_000202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDS1674728.1"
                     /translation="MSHPSAASPMATVSLPASPAASLAPHQTAALQRALRYVDDHLSQ
                     PLRVTELAEAACVSRFHLVRLFRSGTGASPLRYVRRRRIQRACQLLPDAKQPMSSLAQ
                     QLGFFDQSHFVRSFRAETGCNPGQYLAGDAALLLPTENVSNGVHP"
     gene            58292..58948
                     /locus_tag="QEL58_000203"
     CDS             58292..58948
                     /locus_tag="QEL58_000203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017157571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrolase"
                     /protein_id="HDS1674729.1"
                     /translation="MSLATAVAAPSLLSPTDHALVLIDFQSQMAFATHTIDISALRNN
                     VSLISKGAKGFNVPVLLTTVAETSFSGPMFPELPEIFPGQPVFDRTSMNTWEDQAVIA
                     EINRIGKRRLVLAGLWTSVCIVGPALSALAQGFEVYVITDACGDVSEEAHERAITRMV
                     QAGAVPMTSVQYLLELQRDWARGETYELTTGIARDHAGGYGIGIQYAKRMFGAQEGGH
                     "
     gene            58951..59376
                     /locus_tag="QEL58_000204"
     CDS             58951..59376
                     /locus_tag="QEL58_000204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HDS1674730.1"
                     /translation="MLAGHGLDLALLMLRVAAGGFLLPHALGKLFGWFGGPGLAGFAT
                     ELRGFGLPAVAPLPLLLALLQVLSGLAVLLGWQTRVAALAAAAFIGFTVLLALPRGWF
                     WMRGGSEYPLMWTTVLLALALAGPGAWALDGQRLPGDLA"
     gene            59496..61343
                     /locus_tag="QEL58_000205"
     CDS             59496..61343
                     /locus_tag="QEL58_000205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014090280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HDS1674731.1"
                     /translation="MSTLVIRNARITTLDPQQPHAQALAVQEGRIVAVGSDEQIMRDW
                     GTEATLIDAQGRRLLPGLNDSHTHLIRGGLNYNLELRWDGLRSLADAMAMLKAQVDRT
                     PAPQWVRVVGGFTAAQFNEKRLPTLQELNDIAPDTPVFLLHLYDRALLNRAALRACGY
                     TKDTPDPPGGQIVRDSLGNPTGLLLAKPNALILYATLAKGPRLPIEYQANSTRHFMRE
                     LNRLGITSVIDAGGGFQNYPEDYQVIEQLHRDDQLTVRIAYNLFTQNKGKEVDDFRGW
                     SEILQPRQGDDLLRHNGAGEMLVFSAADFELFNEPRPELPAELEPELHDVVKLLVEKR
                     WPFRIHATYDESITRILDVYEQVNREVPFDGLHWFIDHAETITPRNIERIRALGGGIA
                     VQHRMAYQGEAFVERYGVQAARHTPPVKRMLAEGVPVGAGTDATRVASYNPWVALSWL
                     VTGRTVGGLALYGDENLLEREQALRLWTQGSAWFSGDEAVKGTLKAGQLADFILLSAD
                     FFRVDDAQIADITSVLTVVGGRIVHADGDYAGLAPQLPPAMPNWSPVNRFGGYHVGGA
                     ATGLAAAHRHHHGVACSTHGAHGHAARHVAPTDDLTAFWGAMGCSCFAF"
     gene            61322..62605
                     /locus_tag="QEL58_000206"
     CDS             61322..62605
                     /locus_tag="QEL58_000206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012480556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alginate export family protein"
                     /protein_id="HDS1674732.1"
                     /translation="MLVLRVLSLALLAMPALALACDGGHCSDAGDGQLQWDASLRVRG
                     LYYDPTRFGIGGAEDGYGLLRALASATYVEDTWQAKLQLGVHAESGKAGGPGRTDRSA
                     LDVQQAYWRWQHGGFHLQLGRQEAGYGSSRLLSVRDGPNIRLAFDGARAGWKGRLGML
                     DLMVLRPVENRAGAFDDRGEHSAHLWGAYATTARGQATGQWDLYLLDYRRDGARFAAG
                     SGTERRQTLGARWFGQAGALDWNNELVVQGGELRTATGDLDIRAWTLATDTGWRWPDL
                     PLQPRLGLKADIASGDGNLRDGRLGTFNALFPKSAYFSEASLLAPANLMDIQPTLSLR
                     LHDAVTTELGVQMAWKHRRADAVYTTPAPLLALPGSAGGARRIGNQYKSETRWQASEH
                     WQWQLQLAWVDAGPALKQAGGQDTLFASIVGAWQW"
     gene            62599..>63344
                     /locus_tag="QEL58_000207"
     CDS             62599..>63344
                     /locus_tag="QEL58_000207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDS1674733.1"
                     /translation="MVNATASQPPVPAAGAWSPLKIRMFRSIWLAILASNIGTWVNDV
                     AAAWVMAERTGSPLMVALVQSATTVPIVLLALAAGTLADIVDRRRYLLATQGWMLLVA
                     AVMAALTAMDMLTPQLLVLLTFCMGCGAAMAMPAQAAIVSELVPQPMLASAVALNSIG
                     INIARSIGPAIGGVIVAQLGAVWAFGFNAITFAAMLFVVWGWKRDPKQSSLPPEGFGA
                     GLKAGLRYASRAGRLQAVLIKSVGFFFFAAA"
BASE COUNT        10984 a        20280 c        21380 g        10700 t
ORIGIN      
        1 ccgcagtcag gcagttcggc acccggctcg aacaccacca gcgtgtgcgc ggcctcgtcg
       61 ccctgcgcct gctcgatgcg ccaggccagg ccggcttcgg ccagcaggcg ggtgacgaag
      121 gcccagtcgg tctcgcggta ctgggtggtg atcgcacgga ccggcagttc ggcctgcacg
      181 tcgaagcgga acaccgcctg cgggtagtcg gtgaagatct gctcgcagat ggcgcgggtg
      241 tcctggtcct ggaagatcac cgcgttgcgg cgcagccgca gcagcgccgt ccagggttca
      301 aggatcaggc ggtagcgggc caggccgcca tcgctgccca gctgtgccgc ctcggtgcac
      361 aggccatgcc actgccgcag cgagccgtcg gcctggcgca gctgcagggt cagcggctgc
      421 tccagccagg attccagttc caggaaggcg tcggtggcca ggcagtcgat ctgcaggcgg
      481 ttgtcgccgc agaccgactc ggtgccttcg aagcgttcga cgaccaggcc ttcctcgggc
      541 cccttcagct ggatcaggcg ttcgcgatgg gacagcgaag caagggatgc gagcagtgcg
      601 gagcttggga tgtccatatc atcaggctca tggcagggtg atcgtgatgt gggcagtgcg
      661 ctcgggcatc tgcaccacgt cgttgtaggc cgccagctgc tggcgcgtct catggccaag
      721 ataggtgcgc atgccgaaga aggcgacgat gccaaaacag ccgaccacca cagccggcag
      781 ccacagcggc accacgcggc gcaggctgtg gcgaacattg tccggcggca gcgcgtgagg
      841 tgcgaaaccg tggcgcttgc ccttcaggta gacgatctca tcgcccaggc gggcggtcag
      901 gtagcccagc ttctcggtgc cttccagccg gtacttgcct tcgaagccca tcagcaggca
      961 gtagtggtag acctccagcg aaggcaggcg cgcggcgccc tgtcggcgca gctcttccag
     1021 gcggtcgaag aaatgctcgc cggccaggtg ctcaccgaac agacgcagct gcagcgggtt
     1081 gcgttcccag gtttcgtgca acggcgaggg ctgtgacagg atcgcctcgt ccacggcggc
     1141 acagaatgcg tacttggcag cgtagacatc ctcggacgcc acgcccaggc gcatcgcatt
     1201 gcgctccacg ccatcgagga acttctgcac cgtctgcacg aagctctccg catcatgcgg
     1261 cagctgcccg cgcttgagca gcaacagcag gtagaaaccg tcggacatca ggtcctgcag
     1321 gctctgcggg ttggcggcct gcggtgtggg attggccatc gcgccgttgg cggtcagcga
     1381 cggcatcggg cccggagtcg ggggcagggg ggaattcatc atgaggtcac cgccacaagt
     1441 tccatcttca gctcggcaat gccggccggc acgtagatca tcaccgactg cgccttgagc
     1501 atgcgctcat acagcgcgcc gcgcgcgtcc agttcgaagt agtggctgcc agggcgcacc
     1561 gggatcgcag caggcacctg tgcggcatgg gtcagcttca cgcccggcaa cgcagacagc
     1621 acgcacttct ccacgtcatc cggcgcgccg accttgaacc gcaccggcac gctctggatc
     1681 agttcctgtg ccggcagcga cgccgacacc gacaggtaga acgaggcgtt gccatcgatg
     1741 cgctgcgagt ccagccggcc caggtggtag gagggcttga tctcgttgag cgcgatcttg
     1801 aagtagcgcg tggaaatcac cgtatccagc agtgcgcgca cgatctccag cagcttgcgg
     1861 aacgaggctt ccggctgatc gtggcgatac accggtaggt cgcccagctg gtaggcattg
     1921 gagaatgtga gcagtgcgcc ggccatgcgc agcagttcct ggtgcaggcg ctcgggatgc
     1981 agctgcggat gatgcagcag atgcgccagt gcactgaacg aactgttgat ggtgtgcagc
     2041 agccagaacg aggcgatatc gccggagcgg aactcgatga tgttctgcga ggtctgccga
     2101 tgcaggccat acagtgcgtc caccttggcc tgcagcgcgt cgagcaccgc gcgcagttcg
     2161 cggtgcagga acggcgaggc ctgcagctgc gcgcacggcg gaatgaactc gtcatccagc
     2221 tcgaagccgc cgctggaggt gcgccgcacg cgcgccaccg gcacggtggc gtaggcatcg
     2281 cgcggctgat catcggtcag cagcttcacc gccttgctga ggaaggccag ttcggcttcc
     2341 accgcatcgg tgaacaggtc ctgggtgtca cgattggcct ggcggtagcg ggccagcgcg
     2401 gtgccctcgg catcggcgca gttggcgccg tcatcgcgca gcagtggcaa tgccaggtag
     2461 accacggtgg actgcacgcc cggcggcaga tcctgcagcg acaccgcatc gggcaggctg
     2521 tcatgggccg gcgcgtcgta ggtctcgcca tcgggaaaca ccgccgagag gtcgagcgga
     2581 cgcagcgtgc cgccggcaag tgcatgtgga tcgaagcgca cccggcgcgc accccaggca
     2641 tagggatgca gcgtctgcga aaggtcctgc agccgcgctt cgtgataggc gtcctgacgc
     2701 tggaaatgct gggggcgcag gaacagccct tcaccccaga gaaccttcga catcctgctt
     2761 acataagcca cgttcaatcc ttggaaatag ctcaaaaaaa tcgccctggt gggccggttc
     2821 cgtcatcgtc gcgctccgct gcgacaaaac tccccatcca gtaatgtgaa aatgtgagtc
     2881 gcttctcaca tttagcggcc cggggcaaac cttgcactgg cgatactatc gcatcgacga
     2941 atttgggtgc cagaattccg gcgcgatatt atttcgcgcc tgcacaacgg attgatgcaa
     3001 gactgcccgg atctccggaa atgcgcgtca acaaggcttt gctgtcactg gtcagcgcac
     3061 aggcatggac gccgatggtg accccgtcct gcggcagggt cttgcccttg gtgtcgaatg
     3121 cgagccgcca gcgattctcg gccggggcgc ggaacagggc gaccacgcca agcactgcac
     3181 ttccttcact caactgctcg gacaattcct gccgggcacc gggggtcagc acgacttcgt
     3241 tgaccgacag caggtccgca cccagggccg cctgctcgcc ggcctggtcc aggaaggcgt
     3301 tgaagggggc ctgttcgaag cgctgcaggc tgcgcaggtg gtagatcttg accaccgcgg
     3361 cagtggcccg cttgtcattg ccggcattga ggttgctgcc ggcatacagg cgaagcggga
     3421 cggtcggggg cgcctggggc ttttcctcac ggatgccgac cgcctgcagg gtcttgtcca
     3481 tcgctttacc caacttgctg tcgctggcgc aacctgtcag ggagccggac ataatcaggg
     3541 agaaaatcgt gacggagatc acgcggcgga atcggaaaag ttgcgcattc atgtgcagtc
     3601 ggcgggctcg gagtgcgggg taaaaggtgc gcgtatatgc gtttttgctc gcgaatatca
     3661 catcgggatg tgaagagtgt gtctaccgga ttcgccatat tcttgacgaa attcactata
     3721 ccggcgcgta ttcgcgaatg tacactgccg ccgacagggg caggaatccc gtgtgttgta
     3781 tcggcggaga ttcggcttcc tttaggaact aatttcgacg agggatcact atggaagtga
     3841 aggcaatggg gaaggctgta taccggccga tgttcgcgct gatgatgttc tcgggcctgg
     3901 cggcctgcgc atcggcaccg aagaaggccg aggtcgtgcc gttcgaaacc acgctgagca
     3961 acgcggaggc gcaggtcacc gctggcggtg ccgatgccgc gatcagcgcg ttcgaagtgg
     4021 cggccaaggc cgacccgacg cgcaaggagc cgtgggtgcg catcgcacag ctgcagttcg
     4081 atcagggcca gtacgcccgc gcgatcgtcg cggcggaaga ggtgcttcag cgcgatccca
     4141 acgatctggt ggccgatggc gtgatcaccg ttgccggttt ccgcgttgcc aaccagtcgc
     4201 tcacccgcct gcaggggcgt ggtgcactgg cgtcggacac cgcacgcaag gaagcacaga
     4261 cgctggccac caccctgcgc aacaccatgg gtgatgccat tctcgatccg acgcccaagc
     4321 ccaagccgcg cagccgcgcc cgcgcaggcc gtgccgtcgc tccggccgcc aacgcgcagc
     4381 ccgccgccac gcagccggcc aagcccgctg cccgctcgaa cacctccgat ccgttccaga
     4441 acatcggcaa ctgatccgga accggcccca gtcaggagac actcatggcc aagaaggaaa
     4501 gcatccagaa gcggctgcag aagatccgcc cgccgcgcgt ccagctcacc tacgatgtgg
     4561 agaagggtga cgcgatcgag cagaaggaac tgccgttcgt ggtaggcgtg atgggcgatt
     4621 tcagtggcaa cccggagcag ccgctgccga aggtgaagga tcgcaagttc gtcaacgtcg
     4681 atctggacaa cttcgatgaa gtgatggaag gcatcgcgcc gcgcgcggtg tatcgcgtgc
     4741 cgaacaggat cagtgacgaa ggtggcgagt tcggcgtcga gctgaagttc aattcgatcg
     4801 aggatttccg ccccgaatcg gtggtggagc agatcgagcc gttgcgccgg ttgctcgagt
     4861 cccgtaccaa gctggctgat cttcgcaaca agctggctgg caacgagaag ctggaagacc
     4921 tgctgaccga tgtgctcaac aacaccgagc agctgaagaa gctcggcgtg accaaggagg
     4981 actgacccat gtcagctgaa gccagccagt tggccgccca ggccgtcgaa accgaagagg
     5041 tgggcctgct cgaccagatc gtcgagaaga gcaaggtcgc caagtccaag accgagcatg
     5101 atcgcgccaa ggacatcatc gccgccctgg cgaaggaagt cctcgacggc accgtggtgg
     5161 tctccgacaa cctcaacctg acccttgacg cacgcatcgc cgagatcgac cggatcattt
     5221 ccgagcagct cagcgcggtc atgcatgccg agccgttcca gaagctggaa ggcagctggc
     5281 ggggcctgca ttacctgtgc cagcagacct ccactggccc gaacatgaag atcaaggtct
     5341 tcaattcgcc gcagaaggac ctggtcaagg acttcaagtc ggccatcgac tttgaccaga
     5401 gcgcgctgtt caagaaggtc tacgaggaag agttcggcac gttcggcggt gcaccgttcg
     5461 gcgcgctgat cggtgactac ttcctcggcc gccagccgga ggacatgtac ttcatcgagc
     5521 agatgtcgca cgtggccgcg gcggcgcatg cgccgttcat ttccgcagcc ggcgaaggca
     5581 tgttcggcct ggaaacgttc accgacctgg gcaagccgcg tgacctggcc aaggtgttcg
     5641 acaccgtcga gtacgccaag tggaagtcgt tccgcgagag cgaggacagc cgctacgtgg
     5701 gcctgaccat gccgcgcttc ctcggccgcc tgccgtacaa cccgaaggac ggcaccacgg
     5761 tcgaggggtt caacttcgtc gaagagatcg aagcggccga ccacagcaag tttctgtggt
     5821 gcaacaccgc ctacgcgatg ggcgcgcgcc tgacccaggc gttcgagagc ttcggctggt
     5881 gcgcggccat ccgcggcgtg gagggcggtg gcctggtcga agacctgccg acccatacct
     5941 tccgcaccga cgatggcgaa gtggcgctga agtgcccgac cgaagtggcg atcaccgatc
     6001 gtcgtgaaaa agaactcagt gacctcggct tcatgccgct ggtgcactgc aagaataccg
     6061 actacgccgc gttcttcggc gcacagtcgg cacagaagcc gaagaagtac aacaccgatt
     6121 cggccaatgc caacgcgatc ctgtctgcac agctgcagta catcttcgcg gtctcgcgca
     6181 tcgcccatta cctcaaggcg atgatgcgcg agaagatcgg cagcttcgct tcggcgggca
     6241 acgtcgagga attcctgaac cgttggattg cccagtacgt actgctggac gacaacgcgt
     6301 cgcaggaagc caaggcgcag ttcccgctgc gtgaagcctc tgtgcaggtt tcggaggtgc
     6361 cgggcaagcc cggtgtctac cgcgcggtgg ccttcatcag gccgcatttc cagctcgatg
     6421 agctgtctgt ttcgttgcgt ctggtcgccg aactgccggc gtccgcgaaa aagtcgtaac
     6481 gatttgcttc aactgaagcg tccaggggag tccgctcccc ggattgcagt gacgcttatt
     6541 tcaagagggc gtagcccccc ttaaccgcca ggcccgcgcc tggcacatca aatctcacgg
     6601 aagaacggaa tttaggagac cagatatgca gcacgctttc ctctcgattg acaccatcaa
     6661 gggcgagtcg cacgacgaca agcacaagga ctggatcgaa atccagtcgt tctcgcagga
     6721 cctgttgcag ccgcgttcgg ccaccgcgtc gacctccggc ggcaccaccg cagcccgcgt
     6781 gaacctgtcc ccgatcgaaa tcaccaagtc gatcgacctc gcctccacgg ccctcaacca
     6841 ggccgcctcc aacggcacca ccttcccgaa ggcgcagatc cagttcatgc gcgccgacaa
     6901 ggacggcaac gcgatcaatt actacacggt cgagctgctg aacgtgctgg tccaccgcgt
     6961 caccaccacg gtggacaagg aaggcatgcc ccaggaagtt gttcagttga gcttcggcgc
     7021 catcaagtgg acttaccagc agcagaagcc ggaaggcgga gttggtggca agaccgtcgc
     7081 gcagtggagt gcaaccaaga acatcccgaa ctacaccgtg tgatgttgtg tcgctgcgat
     7141 ggcgcctcgt gcgccatcgc agtctgatcg ccgggcaagg ccaggaacgg ccttgccttt
     7201 gatgcaccgc tgccgcccgc acggatgccg aacctgagtg gatcgaccaa tgaagggact
     7261 cgaacccagc ctgctggaaa aactgttcga cgacgccccc aagcagacgg gcgccgggcc
     7321 ggtcttcaag tccgtctcgc tggagcagta caaggaatcc atcgcccgcg acctggaggg
     7381 gctgttgaac tcgcgcgccg cgttccagga aggcgacatg aaggaattcc ccaattgccg
     7441 gcaatcgctg ctgacctacg ggttggcgga cttttccgcg atgagcctgg ccaacgccta
     7501 cgatcgtgct gccatctgcc gctcgctgga gcaggccgtg gcgcgccatg agcgccgcct
     7561 gcgcaacgtc aacgtccatc tggatgcggg caaccagttt gccggcgggc tgcatttcac
     7621 catccatgcg ctgctcgacc tggagcctgc gcgcgagccg gtcagcttcg atgcgatgct
     7681 gcaaccctcg accctgcagt accaggtcac ccgcgcacgt cgcacgcagg ccgcctgatg
     7741 caggacctgc tgccttacta cgaacgcgag ctgggctacc tccgccgtta cgggcgcgag
     7801 ttcgccgagc gctacccgaa gatcgccggt cgcctgcagc tctccgccga gggcagccag
     7861 gacccgcatg tcgagcgcct gatcgaggcc ttcgcgctgc tcagtgcgcg cgtatccaag
     7921 cgcatcgagg acgactatcc cgagttcacc gacgcactgc tggatgtgct ctatccgcac
     7981 tatctgcggc cgttcccctc ctgctcgatc gcccatttcg ataccgaagg ggtggcctcc
     8041 aagctgagcg cgccggtacg cgtgccgcgt ggaaccgccg tccagagtcg tccggtccgg
     8101 ggcgtgccct gcgatttccg tacggcctac gatgtggtgc tggcgccggt cggcgtgcag
     8161 caggtggtct atcgcagcgt cgccgatgcg cccatggcga cgaccctgcc ggccggaacc
     8221 ggcggccaga tctcgatggg cttccagctg ctgtccgatc agctgggttt tcaccagctg
     8281 ggtaccgatc gcctgcgcct gttcctagat ggcgagccgt cggtacgggc tgcgctgcgc
     8341 gatgccctga tgcttggcgt gaaggcggcc tacgtcgaat ccgatggcga cggacgctgg
     8401 cggcgcctgg acagcgtgcc gttgagcccg gtcgggttcg ccgacgatga ggccctgatc
     8461 gactttccgg cgcgctcgca cccggcctat cggctgttga ccgaactgtt cgcctatccc
     8521 gagaaattcg gctttgtcga cctgcacctg ccgtcggtga cggcgggcgc cagccgacgc
     8581 ttcacccttc acctggtgct gcacgcccag ggccaggacc ggggcaacgc gatggtgctg
     8641 gaggagctgg gcgcacacag cgtgcgcctt ggctgcacgc ccatcgtcaa tctgttccgc
     8701 accagcggcg agccgatccg tgtcacccat cgtacggtga actacccggt gctggcggat
     8761 gcacgccgcg cgttcgccta tgaagtgcat tcaatcgact cggtgcaccg catccggcag
     8821 acgccgcagg gcgagctgat ccaggcattc cggccgttct attcgctgca tcatggcgaa
     8881 gaccccgagc gcaccggcca gtactgggtg gcgcggcggg acgaagacat cgcgcggcag
     8941 agcccgggtt tcgaaaccga gatcagtttc gtcgacctgt cgttcaatcc ggtactgccg
     9001 cagaccgata cggtcagcct ggagctgacc tgcagcaatc gcgacctgcc caaccagctg
     9061 gcgttcggcg tggccggggg cgacctgacc attgagggcg gcagcccggc caaggcgatc
     9121 agcctgctgc gcaagccgac caagccgctg cgattccgcc atggccgcaa cgcgcagtgg
     9181 cgcctgatct cgcacctgtc gttgaaccag ctgtcgctca ctgccagcgg gcttccggca
     9241 ctgaaggaga tgctgcgcct gtacgacctg tccggcagca atgtgtcggc ccgccagatc
     9301 gacggcatcc tcgagctgca gcagacgccg gtgaccacct ggatgcacgg ccgccagttc
     9361 gcctcggtgg tgcgtggcct ggaaatccgc ttgaccatca atgaggccca tttcgtggga
     9421 accggcgtgg ccgcgttcgc ccaggtgatg gaccacttct ttgcactcta cgtgcatgcc
     9481 aacagcttta cccgactggt gctggtatcc ggcgacagcg gagaggagat cgtccgatgc
     9541 ccagcgcgca gcggcgaatc gatcctggcg tagcccagca gctgctggcc gaaccacacc
     9601 gcttcgagtt cttccaggcg gtgcgcctgc ttgagcaggt gttccagcgc cagggcgtca
     9661 agcccggcca ggcggtgccg atgcgcgtgc gcttccgcaa ctcgctgtcg ctggggtttc
     9721 cggccaccga gttgtcggcc gagggcgagg tgtattcgct caagggtgag cggctgttgg
     9781 accgcgaggc cgtggaacag gcgctgcatg gcgaggaact cgccgaggtc cacctgacgc
     9841 cgcagttcat gggcttgctg gggacggccg gtgcgttgcc cctgcactac accgaaaccc
     9901 tgcagctgcg cgagctctac cagcgcgacc ggaccgcgcg ggcgttcctg gacatcttct
     9961 ccacccgtgc ggtgtcactc cattacgccg cctggaagaa acatcgcctg gcgctgcagt
    10021 acgagctgga tcgccgtgag cgcttcctgc cgctggtgct gtcgttgctg ggcatgggca
    10081 tgagcgagct gcgcgaccgc ctgcacgagg gcgacggcga gatctttgac caggcggtgg
    10141 cctattacgc cggcgcggtg cggcaacgac cggtctcggc ggcgctgatg cagcgcgtgc
    10201 tgtcggacta tttccaggta ccgctgcacc tggagcagtt cgtgggcgcg tggtaccggg
    10261 tgccgccggg gcaggcgacc cgcctgggcc aggccaacgc ggtgctcggt gccagcgcgc
    10321 tggccggaga ccgggtgtgg cagcgcgacc tgcgcctgcg cctgcgtatc gggccgctgc
    10381 gccgcgacca gttcgatgcg ttcctgccgg gtggcagtgc cgccgaagcg ctgtccaaat
    10441 ggttgtcgct gctgaccggc ggcattcttg agtatgaagt tcgcctggtg ctgcgggccg
    10501 aggatgtaca gggcagcgca ctcggtagcg caagcagcgt ccgcctgggc tgggacagct
    10561 acctgtgcac ccggccgcag gatacctcgc gtgaggacac cacctatggc atccacacat
    10621 tgcaatgaca ctgcgccgat ggcgtccgcg ccatcggctc ccgaacggtt ccagcaagga
    10681 gtgcgcgttt ccgcatgagc atcaacctca agaccctgat cagcaaactg gacgacacct
    10741 gccggcaggc cgccgaacgg gcggcgaacc tgtgcatggc acgcggcaac tacgaggtgg
    10801 acctggaaca cctgttcctg gccctgctgg aacagccgca gagcgatttc gtgttgatcg
    10861 cacggcgcag cggcatcctg cccgagtcgc tggaacgcga tctcaacgat gagatcagcc
    10921 agttcaagac cggcaacagc cgcactccgg tgttctccca gcacattccc aagctgttcg
    10981 agcatgcctg gctgatcgcc tcgcttgact cggaaaccac ccgcatccgc agcggccatc
    11041 tgctgctggc cctgctgacc gaacccgacc tggcgcagct ggcttaccgg ggctccaagc
    11101 tcttcgtgcg cttcaagcgc gacgagctca agcacgactt cgccaagctc accgagggct
    11161 cgcaggaagc ggtgcagacc gtgcgcttcg ctgatgcctc ggccggcggt gaagcgggtg
    11221 aggacgaggg cgcggtgccg ggcgaggcca agggcggcct gtccaagacg ccggccctgg
    11281 accagttcac caccaacctg acccagcggg cgcgcgatgg aaaaatcgac ccggtgatcg
    11341 gccgcgatgg cgagatccgc caggtgatcg acatcctgat gcgccgtcgc cagaacaatc
    11401 cgatccttac cggcgaggcc ggcgtcggca agaccgccgt ggtcgagggg ctggcccgcc
    11461 gcatcgccga caaggacgtg ccggacgtgc tgcagggtgt ggagctgcac actttggaca
    11521 tgggcctgct gcaggctggc gccagcgtca agggcgaatt cgagaaccgc ctgaagaacg
    11581 tgatcgacga ggtcaagaag agcccgcatc cgatcatcct gttcatcgac gaagcgcaca
    11641 ccatgatcgg tgccggcggt accgccggcc agaacgatgc agccaacctg ctgaagccgg
    11701 cactggctcg cggcgagctg cgcaccatcg cggccaccac ctggggcgag tacaagaagt
    11761 acttcgagaa ggacgccgcg ctggcgcgcc gcttccaggt ggtgaaggtc gaggaaccga
    11821 gcgaggcgct cgctgcggcg atgctgcgcg gcatggtcgg gctgatggag gcgcacttca
    11881 acatccgcgt gctggatgag gcggtgaccg aagcagtgcg cctgtcacac cgctacatca
    11941 gcggccgcca gctgccggac aaggcagtca gcgtgctcga caccgcctgt gcgaaggtcg
    12001 cgctggggca gagcgccact ccggcgatca tcgaagacac ccgcaagcat ctggaccggc
    12061 tgcaggcgga gatttccgca cttcagcgcg agacggccgg tggcagcgac cagcatggcg
    12121 aacgcctggc tgaactgcat gcacaacagg ccgaagcgca ggccgtgctg gccagcaacg
    12181 aagagcgcct gggccgcgaa cgtgacctgg ccggccgcat cgctgtactg cgccagcaga
    12241 tggagcaggg cgaggctgca tcgggcgatc ccgagccgtc caatgacgac aacgaaggcg
    12301 atgttgccgt ggccaagccg gctgccaagc gcggcaaggc caaggccgaa ctctcgccgc
    12361 agcatgccga gctggcgcgg ttgcaggccg aactgcgtga gctgcagggc gaaaccccga
    12421 tggtgccgtt gcaggtcgac ggcaccgtgg tggccgaaat cgtctcggcc tggaccggcg
    12481 tgccgctggg tcgcatggtc aaggatgaaa tccgcaccgt gcgtacgctc ggcaatctgt
    12541 tggtcgagcg cgtcatcggc caggaccatg cactggatgc gatcgcccag cgcgtgcgca
    12601 ccgcgaccgc caagctggaa gacccgaaca agccgcgtgg cgtgttcatg ttcgtcggcc
    12661 cgtccggtgt cggcaagacc gagaccgcgc tggccctggc cgacatcctg tatggcggcg
    12721 agcgcaagct cgtcaccatc aacatgagcg agtaccagga agcgcacagc gtgtccggcc
    12781 tgaagggctc gccgccgggt tacgtgggct acggagaggg tggcgtgctg accgaggcgg
    12841 tgcgccgcaa cccgtacagc gtggtgctgc tggatgaagt cgagaaggcc catccggacg
    12901 tgctggaaat gttcttccag gtgttcgaca agggcatgat ggatgatgcc gaaggccgtg
    12961 agatcgactt ccgcaacacc ctcatcatcc ttacctccaa catcggttcc tcgcagatca
    13021 tgcaggcctg cctgaacaag ccggccgaag agatccccgg cgcggaggca ttgtccgacg
    13081 cgctgcgtcc ggtactgatg cgcaccttca agccggcctt cctcggtcgc ctgaaggtgg
    13141 tgccgtatta ccccatcaac gatgacgtgc tggcgcagat catcacgctc aagctcggcc
    13201 gcatccgcga ccgcgtcatc gccaatcaca aggccacctt cagctgggac gacagcctgg
    13261 tggaggccgt gcttgcacgt tgcaccgaag tggactcggg tgcgcgcaac gttgaccaca
    13321 tcctcaatgg aaccctgctg ccggaaatcg ccgagagcgt gctggcggca atggccgaag
    13381 gaaaccggat caacgccatc aaggtcaccg ccggcaagaa gggtgacttc aaatacaaag
    13441 tgtcatgaca ctgagcagaa ggagaacgct gatggaattc tatggatttg accgcgaagc
    13501 ggccctcaac cactgcgaca gcctggaact ggggctgggc cgtgaactgg accgcgtgcg
    13561 tgcctggaac cggctgcgcc cggagcatgt gatcgagctg ctggacacgg ccgtgcccgc
    13621 cgcccgccag gatgcccgca acgtcgccgc gcagatcagc cggggttcgt ggcgcatcca
    13681 catggatgcc ccggtggttg gcaagccgca gctggtgagc aacgtacgcg aactgcagat
    13741 caccgccggc ggccgcgatt accgcctgaa gatcagcgag ggcgtgcgcc tgcagctgga
    13801 agagatcgtc caggcggcct gatggccgtg cgtgcctgcg ccccggtcgg gacgcaggcc
    13861 gcgcgggcgc gggaagcgga gtacaccgat gcgcatgccg catgcagacc accttgaggt
    13921 acgggaagta ggggaagcac catggatctg gtaaacaacc tgcgggccgc gctggccggc
    13981 ccttcgcacg cccagcgctt cctgcggctg cacacgtcgc tggggagcga tgtgctggtg
    14041 gccgaaaccc tcgatggcgt cgagcagatc gacggcatgg gtttccagtg gacgatcacc
    14101 gccctgtcgt tggacgccgg cctgcagctg gcgccgctga tcgggcaggg tgcgctgctg
    14161 cagctgcagc aggccgacgg cagcctgcgc ccgttgcacg gtcgcatcac cgccgccgaa
    14221 cggctgggca gcaatggcgg cctggcgcgc tatcggctgc gcctgcagcc gtggctggcg
    14281 ttcctgtcgc agcgggtgga cagctacgtc ttccacgaca agaccgtggt cgagattgtc
    14341 gaggacctgt ttgccgacta cagcgggctg gcaccggcct ggcgctggtc gctgggtgac
    14401 gccagccagt acgcacggcg cagcctgacc acgcagtacc aggaaagcga cctggccttc
    14461 gtccagcgcc tgctggccga ggagggcatc tattactggt tcgagcatgc cggcgagccc
    14521 ggcggcgcgg acttcggcac gcataccctg gtgctggccg accatagcaa cgacaccacc
    14581 gaactgggcc gcgtgcgctt ccatcgccgc gacgagagcg agcgcagcga cagcgtgcag
    14641 cagtggtcca ccgcgcaccg ctggcggccg ggcaaggtcg aacgtacgac ctgggactac
    14701 cgcaccctgg agcgtcgcca ggccagcgcc gaggccgagc agggcaacga cctgggcatt
    14761 gtcgaccgtg atacctgcgg cccgtatggc tggcaggaca acgcacgcgg ccagcgccgc
    14821 gcgcagcagc atctggacgc gctgcgcgtg cgcacccata ccatcgacgg cgccggccaa
    14881 tggcgggcat tggcaccggg cgcgcgcttt ggcctgtcgc agcatccgca ggtgggcgag
    14941 gacgcacagt tcctgtgcct gtcggtgctg caccaggcgc gcaacaacct cgatgccgac
    15001 gtgttcgacg ctctggaaca gaccctgggt ccgtccagtg tggcggtgcc ggcgctgcca
    15061 gatgcgctgt ccgggctggc ctatggccag gcgccgggcg aggtgtccac cgcgttctac
    15121 gacaaccgct tcgtcgccat ccccgccgaa gtgaactacc ggccacagac cgaggacggc
    15181 cacggcgcgc acctgcatcc gcggccgacc atcaccggca cgctcagcgc gatcgtggtc
    15241 agcgacggcg acccgctgct gtccgaccgc gaccatcgca tcaaggtgca gttcccgtgg
    15301 cagcgcggcg gcaacgccag cagcggcctg gcccatcccg gcggcgacga caacgccccg
    15361 gccaacggag gcgcctggac ctgggtgcgg gtgatgaccc cgtgggccgg cgacaactgg
    15421 ggcggggtgg tgctgccgcg gcgtgggcag gaagtgctgg tggcgttcct ggaaggcgac
    15481 atcgaccgcc cggtggtggt cggtgcggtc tacaacggcc gtggccagca ggacgcacag
    15541 cacaaccaga tcaacggcgg gggcgccacg gccaccggca acgccgccgc ctggttcgag
    15601 ggcaacgacc acgccgcggt gtacaccggc ttcaagagcc aggcgctggc cgacagccag
    15661 ggcggcaccg gcggctacca gcagcttcgc ttcgacgaca cgcccgggca gggccgcgcg
    15721 cagctgtcca ctacccagca cgagaccacg ctgaccctgg gccacctcaa gggcggccag
    15781 gacaatgtgc gcgaaggcga gcggggtttc ggcgtggagc tgtccacgca ggcacagggc
    15841 gcattgcgcg ccggccgcgg cctgctgctg accaccgagc agggcacgcc acagatggcc
    15901 gcgccgcagg cattgagcca gctgcaggaa agccagcagc tgctgcagca gctggccgaa
    15961 tcggccgcca accagcaggc gcagttgccc aacgacccga ccgaactgcc ggtggacagt
    16021 acgctgaccg agctgcagga gacgctgcgc gccacccaca gcggcagtgc tgccggcagc
    16081 atcgccggtg gcgagggtga agcgccgggc tggagtgcac cggtgctgct gggcagcggc
    16141 gtggccggcg tgctgagcct gaccccggcc gaccaggtct gggtgagcgg cacgcacacc
    16201 acgctggcca gcggcgtggc actgaactgg atgacgcagg gctcgctgac gatggcggtg
    16261 gccggcggtc tggtgatgta caccgccggc gtgcagccca gcggtgaaag cccgaaccag
    16321 gagcgcggca tcgcactgca cgccgcgcag ggcaaggtga gcgcgcgtgc gcacaagaac
    16381 cagatgatcg tggcggccaa gaccaaggtg cgcattgcca gtaccgaagc ggacgtgcag
    16441 ctgtcggcgc cgagcaagca tctgctggcg acggcggcgg gggcctacat ccggatcgag
    16501 ggcgacaaca tcgagctggg cgcgccggga aaagtggagt tcaaggccag ccagcgggag
    16561 tgggtggggc cggcgagtgt caacgcgccg ctggtacttc ctaatccagc tgacgcctac
    16621 aagctcaagt acgtgcttcg cgatttcgcg ggacagccga tgccgaactc accgtatgtg
    16681 cttgtgatgc ccgatggcag tgcacgggaa ggtaccacca atgcgcaggg tgaaaccgag
    16741 caggtggtga ccaagggccc gcagaacatc catctcttcg tcggcgacgg tgaaaccaag
    16801 cacgaaggct attacctcaa cgacgaagcg taagcgcgca gaccgttacg gcgcgacaag
    16861 gaagacacca tggcaactgg aaatttcaga ctctattacc tggctgacaa cggccagcag
    16921 cgtcctgccg cgaaggtccg ctaccggatc ctgcagctgc ctgatcgcaa cgaggtcgtc
    16981 aatggaacaa ccgacgcaca gggcctcacg aagttcgtga ataccacgcc gaatccgttg
    17041 cagaacccgt tggacaaagg tgtcaagcct gctacgcagg taccgttcct tccgccctca
    17101 acaatacgat tccaactgga agtctgggac ttcgaccagc gcaagtgggc gcaaccggac
    17161 ttcgctggcc gccagaagaa ggcggtctcg cacgacatcg agcttcagct caacagcacc
    17221 atcatgacga tggcaccgat ccagtgcgcg cttgaactgc agccctattt ccgggtgaag
    17281 ttccagatgc aggccgacca gaaggcgcta cccaatgccc cttaccttgc ctatgcggtg
    17341 gatgcaaagg gacgcgaagt tgctggcaac gacgcggcgg gccggccaat caaaggaaat
    17401 accgacaaga acggcatgac gccgcgcatt acctgcaacg ggcgtcgtcg cttcaatttc
    17461 aatctgccgg gaagcaaggt cggccgcaac actgacatgc tggagccatt gatcaaggga
    17521 cagtccacca cgctatatgt gcttggcatg aagagccaag tagccatgag cgagtctggg
    17581 caggggcgga cagccagagt cgacggcaag atcagcgcgc ccgcagttct caacgccgag
    17641 gcacgcgagc tgctgttgct gacgccggat gtctggaacg agttcgaaga actcagcggc
    17701 atgatcgaga atacgatggc cggtctgcac cgatccaggg cgaatcttga caatgcgttg
    17761 caggggcgcg atgccgaagc agtagccgcc gccgaaaagg cgttgggtat tgctgaagac
    17821 aatgtggcga agatgctgaa tgacaacttc tcgaagctga cagacttgaa ggaggttgtc
    17881 accttcgaga cctacgacaa aggcaggcac gcaggcaacg gaagtctggc tgatcgttcc
    17941 ggcctacgcc gtcgctacat tcccgccaag aagtacgagg aactaaagaa gcggcggatc
    18001 atgggtattc ccacagcggt gaacacctct gtcggcacca aggtcaaagg tggtccggtc
    18061 agtggctcca gcgagggcaa gcacgaggtg accggcacca agccattcga cgcggcggac
    18121 ttcaagaagt caatccgttc catcacgctg caggcgaaag ccgagacaaa gatggatccg
    18181 ttcgtcttcg acatcatcga cgccggcggc aacgagttcg tggagcacgt ccagaaaagc
    18241 gattcatatg aagttgcgag cgcttcgcag tggctgcgtt ttgttgcggg cgcaggtgcc
    18301 agcagcgctg ctacgtggaa tccttcaaag ggagttgcgg cagcgaaggc tgaggccaat
    18361 gcctctgcca agttgattct gtttgagggg aaatggacgc acagctactc cgttccaagc
    18421 atcaagggat ggcagatgca gttcggggat gtcgatcttg gagcgatcgt ttttgtactg
    18481 gcctgtgagc tgtacgggtt cgttggcgcc aagggcacgc tcgccggctc tgctgaaatc
    18541 aaatacgtag gcaagaagcc cgttgctacc gcccaacagc gcgaccgttc gcaatcgctc
    18601 gccgagaatt ttgacagcca gcgggggctg ccgcgcgcgc agcttgatcc agcccgggtg
    18661 cgcatgctgg gcatgaatga atcggctccg aaggggagcg gagcgggtgt tcagctgacc
    18721 gctgaggttt tcgcaggcgt ggaggggggg atcacgcctt ctggtgatct gcgctggttg
    18781 ccgccagatc gcaaggaacc tgtgagcttc gccaagattg cattggatgt ggcagtcaat
    18841 gcgggcgcag gcgcaagcgc gcaactcaac atttacttca acagcgggaa gttccgcatt
    18901 cgtgcatctg cacgactctg ctggggtgta ggcgcaaagg gggcagtgga tttcgccgtg
    18961 gacgcaggtg gcatgcagga attcgtgaaa tgggtgttct accagttggc ccactccgga
    19021 ttcatcaagc ttacctatat cgcgcaggac gcattcaacg ttctctccaa gttgttgttc
    19081 atggtcgttg cagaggatag cccgatgggg gtactcctct ccgagaacat tgctgctgtc
    19141 aattttgagt tcaacgcact tcagaatcgt ctaaagaagg cagctgcccg agatgctctg
    19201 gtcaaccgga tcaatagtaa gcctgactgg ctgatctacg cgacgccaga agccaggggc
    19261 atgctgctgt acgccgtgac tcgacactat cccgaatcac atgcgcgcaa tcttcccgag
    19321 ttctctccgg gttggggcga catcgagatc cacgcgctgc cagggcacaa gcaggctgtg
    19381 ctgaacattc tgcagccggt cacatccagg ccggagtgga tgaatgtcat gcagcacatg
    19441 actatcgatg gcgcgcgtcg acccgatgca gggaaagcgg aaggcgatgt ggtgcgcttc
    19501 ctcgattacg gctactcgtt gaacaacgat ctcccgagcg tgttcggaac gatgaacaag
    19561 cactcccgcg acaaggttgg agatgtgggg aattcctatc ttcaatcatt tcttgagaag
    19621 cggtccaagt tgctcaatga attcccgaag ggctatgagg tagcccagat catgatgatc
    19681 gacgacccag ttcagctggc agctctggac ggtagtgaag cgcctacttt cgcaatgatg
    19741 gatccgccgg ggctatggct tgatcgagat gataaaacga tgatggcctg atacctgagg
    19801 gagtacgtct cgcgtactcc ctccgatgga gcatgctcaa tcgcgaacga cacatcggaa
    19861 cccgtatcca tagttctgat tggcctgaat gtcccttcct tttggatcct tccgcttcgc
    19921 cgcatcaggc gcacgggatg tacgtgcgaa cgtcatcgac acaagtgcga gcgagtcccc
    19981 tccttgattt gtgctgctgc gaatgacctt ttcactcccc ttctttggcc cttgcggatc
    20041 gcgtaggtcc tcgccggtat agctggcctc ataccagtcc tgaacccatt catggccgtg
    20101 atcgatcatg tcgtagagcc cggcgggatt gggtggatat ctgcccagag caacgccact
    20161 tccgtccata ttctgatcga agctggctac atttcgacca tcgtcgatct gaccattgtc
    20221 agtcgcgtaa atcaccatct tcccgcctga gcgtgcggca tactcccatt ctgcctcggt
    20281 cggaagtgtg gctcgcttac cagtcgtgct tcccaaccaa gcgcagaact cttgcgcctg
    20341 agtccagctc acccccgctg acgcctttac atcctttcga tagaggcctg catcgatatc
    20401 ggaggtgccg attcgggggc gtccggtgct atcggagaat gcatcgtact gttcaaccga
    20461 tatcttgtga gcagttatcg cgaagtcact cagcgtgacc ttgcgaagaa catcgtcgtt
    20521 ggtctcgccg ctgtaaggaa gcttgtcgac attgtgcact gggccaaagt cacccatcag
    20581 aaaggttcca cccttcatcc gaatcagatc ctgggtgatc tgctgctgaa ggcttgcgct
    20641 tgcgtcagcg ctcccttgga cttggggagc gctattggcg gatttgccag cgcatgcgct
    20701 aggggcaagg ggaaggaggg cgagaatcgt aatgggccac agtcgataac tacgcacatt
    20761 cagctccttc tttgagtcgc cagattctag cagcgtcggc ggaatcattg agtgaaccca
    20821 tgctcagcct tcattgccga gctttgatca atagcgggtt ctgggacgaa cctgtggaga
    20881 gcgccgcgtc atgtgtaggg tagcgcaagt catcggcctg cattgagccg cccaactccg
    20941 gcgagcctcg gaggcgatcc catagccccg ctagcggcgg tgcccagacc tcgtggcggg
    21001 actcggcacc gcatgtcagc aaaagccgag aggcgtacct ccgcgatggc aaggaaggaa
    21061 tgtgctgccg ctagaactgg atcaccgtcc tcggtatgac attcgccctc aacacagtcg
    21121 gcaggttcga gtagggtagt catgcagatc ggggctcggc tggtggaact gggctgcccg
    21181 acttaaggtt gaagatgtgg ggaattccta tctgcaatcg ttccttgaga agcgctcgaa
    21241 gcttctcaag gaattcccga aaggatatga agtagcccag atcatgacga tcgacgaccc
    21301 gctccaactg gctgcgctcg acggcctgag gcaccgacgt tcgccatgat ggacccgcca
    21361 gggctctggc tgaaccggga cgatcaagcc atgcttgcgt gaacagtgga gggcggcagc
    21421 aatttgccgc cattctgata tgtccgatgg gagggcttaa ccctcagtac cgaacggcgc
    21481 agcggaatcc gtggctcccg ttctggttgg aatcaatctc actcccatcg gtgtccttaa
    21541 acttcggagg attcgggggg cggtgatcac gcgcaaaagt cattgaggtg tgtacgagag
    21601 aatcgccgcc gcgtttgctg cttccgcgca ggaccttctc gatgccattt tgggggcctg
    21661 taggattgcg ggcgtcaccc ccggagtaat tctcctcata ccagtcctgt acccattcga
    21721 agccatggtc cgtcatgtcg taaagtccag caggattggg agggaacttg cccaaggcag
    21781 ttccgctacc gtcatcgtac tgggagtagc tcgctacatt gcgaccatca tcgatactcc
    21841 ctgtgtcggt cgcaaatacc accattttgc cgcccgatcg cgccgcgaat tcccactgcg
    21901 cctcggttgg gagcgtgagc ttccgacctg acccctttcc ggcccacgtg cagaagtcca
    21961 gggcgtcctg ccacttcact ccggcagcgg ccttgggatc ggcacgataa agcgtcgagt
    22021 caatcttcga agtgcctacc ctcgggcgac cagtagcgtc cgtgaaagca tcaaaatcct
    22081 caatcgacac tttgtgggcc atgatcgaaa agccgtccag cgtgatcttt cgaagcacgt
    22141 catcgttcat ggctccgctg tagggcagcc tgtcctcgtt gtgcacgggg ccaaaatcac
    22201 ccatcaggaa cgagcctccc ttgatcggta ccaggtcaga tacgaccttt tgttgcgtag
    22261 ctgtaccggg gccgcgcttc gcttcggacg gggaatcttc cgccttggca catgcggatg
    22321 tagtgagcaa cagaatggct aatagagctg cagtccgggg cgagagcgtg gacatcgggg
    22381 acttccttgg ccgaatgttg catgctatcg cgctcgccca gccagtgcat cccgatcgag
    22441 cggagtgcac aatcacgtgg gcccgtcggt ggcgacactg gccgcccagt aatcgcatgg
    22501 catgtcatgc tcggcaacgc tgcgggaaag ggagattgga tgtacaccgg atggatgcgc
    22561 gattttcccg tgggacgtcc actttctcca caggagaggg catcgcgttt caatgtacat
    22621 gccgctcaat ccgtggctcc cgccgaacac gcctgcctgg tccgcttcaa ttcgacctgc
    22681 atcgagctga tcgatcgccg ctttcgtctg cggggaatgg tgtcgaccac ggtagtcctg
    22741 cttggcacgc tggggctgtt cctgctcggc ttcttcctgc tcttcactct ggtcatcccc
    22801 aatctggagg gggacatatg ggactgggtg atgtacggca tggtgggggc gtgcgtggtc
    22861 ggcgcccccg cactgttctg gcatatcacc ctgcgatacg agttcttcac ctacgtctgg
    22921 tacccgacga gattcaaccg gcgcaaccgg aaggtctact tcttcatggg cgggaaggag
    22981 ggcgcggtat ccgtcccatg ggatgaggcc gtcttctaca tcgggcgagg aaccagcgag
    23041 gagttcctgc gtgacctgcg gtgcagtgtc gttgaggatc atgtcgtcaa gcggaccttc
    23101 gctgtcggtc actacttcga tgacgagttg aaaatacgtg gcatctggga gtttgtccgt
    23161 cgctacatgg aagcagggcc tgccgaggtg gtcgacacca tcgacggtcg gcagatgaac
    23221 ctgtcggtca agccttccct gcgcaactgc tatctgttcg tggtcgccag ccttggaccg
    23281 gccatgctga gtgcccggtt catgcttatg ccactgctgc tgcccttggt gctctgccgg
    23341 tggctggtcc tgaagtcctg ccgtgtgcca gtgtggccgc aatgggtgca ggatgagtgc
    23401 gagatcgacg cgaatgaccc tctgaggctg gccgagcctg aggtcatggc gcagtcggag
    23461 tgggatcgtc gttcaactcg atcaggataa cgccgcagat gagtcagttc gccggctggc
    23521 ttgcccagcg ctatcgcaac aaccgcttct tgaccggcta tgaagtcgct gccgacgttc
    23581 gaaactttga tgcgtcagcg ttgatgccgc tggataaagg agttgtctac ctcggcgata
    23641 actgcatcga gtacattgat cggcacttcc tctatcgcgg atgggcagtg atgtggggct
    23701 ttgtggttat cagtctcgta ctactgtttg tgtccgcaat cgcgcacgcg acggttacga
    23761 tgcaggcgga agggaaaagc gtcagtccgg agatggccgt cactgtcgca gtgctgggcg
    23821 ttctgctgct gggcctggtc gcattcgtct actggatgct gcttggaaga gacatcttca
    23881 ggcatcagta ctaccccatc cgctttgatc gaaccacgca ccaggtgcat gtcttcacag
    23941 gcggacgcaa cagggtgatt tcagcggcct ggtcggatat ccgcttcatc attggcaggg
    24001 acaagcccgc tgggcccggt gaagactaca cctacgatct caggggcttg gtgatgcgcg
    24061 gcgaccaggt cgtgcacacc tttgcggtag gctcggattg cggttcgaac cccgccgtcg
    24121 tgctcgcgca ctgggaaatg atccggcgct tcatggagca ggggcgttcc gcgcttccgt
    24181 tcccgccgtt gcagctctac acctcagtgg tgccgagctt ccgcaatgcg ttcatcattc
    24241 atgtctcttc tgcgggcgca gggctgatgt ggatcgcgct gccattcacc ttgccctggg
    24301 cgctgttccg cttccttgcg atgaagctgt gccgcaagcc ggcctggcca gcggccgtga
    24361 cccgacgcgg aacatccgag ccttccgata cgccgccgct gcgtgcgccg gccgtatacg
    24421 ggcgggtgga tcatgcgggt ggccgggcgg atcagatgga gcgattctgg aaggactcga
    24481 tagccgctgc gaaggcccgc aacgatgaag tgcggcagca gctcctgcag gcaacgagcc
    24541 gggtctgaca gaaactgcgt tcggcaacgt gtgcgggctg gtagcggtct tcgggtgcag
    24601 cagagtcgag cacggctcga ctctacaaaa acgcctcaca tcgccgggca ggccgggtcc
    24661 ttgccgctca ccgctgcgca gatccggcgg cggcaatcca cgcccttcag cgacgcgggg
    24721 ctggggcagg cacgcagctg agcctggatg ttcgactcgg tcgatgcgga cttcttgctg
    24781 gccacgcgct cgaaggcggc gcgctcgtct tcggtgcgct tgcgctggtc ggcctcgatc
    24841 tgtgcgatca ggtcgtccat gctttgcggt tgggcattgg ccttcgtttt ggccttggcc
    24901 ttgtcctctt ccttgatgat gccgagcagg gtgccgagca ggttttcatc gcccttgctc
    24961 tttgcgtcgc tctgcgttgc ggcacgcgaa gcgcgtgcgg caggcgcagg actgcgtgcg
    25021 gccgccccgc tcgccgcagt cgccgccgat ggggccgcag cgaccgaagc ggcatcagcg
    25081 gatgcaggcg ctgtgtctgc ggcaggtgca ggcagggccg gctcaccggc ggtggccggc
    25141 gcatcgacga tcatggcagc gccgtcacgc ggggcgcccg ccggaatgtc cgggtgcccg
    25201 gtggcatggg ccggatccgg tgtgagcgaa tactcgctcg gttccggata atcactgctg
    25261 ccggagaagc cccaggcggc cagcccggca atggcgacga caacggcacc gatgcccaac
    25321 catagcccca ggcgccgatt gccaccggcc gacgcgcgcg cagcacgagg ggacgcggtt
    25381 gcctgccggc cctccatgtc tgccagaata cggcccgaat tcggggcctg gcccttcgcc
    25441 tgcgctcccc ctgagagcag acttggccga ttgattccgc cattattcaa gtgcatccag
    25501 cccttggttt gactcggcat ctgccgaagc gaatttccgc attcttagtg aaaggcggtg
    25561 gggcgtcaac cagattacga gtcaaggagg accggtgttg ccaatcgtgg ttgctgccat
    25621 tgccgttgtc gcacttgtgg cggcggtgtg ctgggtgttg ctgtttcccg agaccgtgga
    25681 atcgctgcgc caggcactgt cgcgccgctt gggcggattc cgtcgcaagg cgggtcgggt
    25741 gggcgataaa gtcggtcatg gtgttacccg ggtgcgcagt ggggttcgtg aagaagccgg
    25801 cgctgcgcac agtgcccttc ggcggcattg gccgattatg gcgattgcgg cagcggcgct
    25861 gctgattcct ccaactgtga tattgatcac acgtcagacg gtggtgctcg aagattttcg
    25921 cggcgatgat ctggcggagt cgagttcgat ggtcgcccag ctgctgcggg gggagcgcct
    25981 gaccccgccg ccgccgccac caccggaagt cttcaccacc gccgaggtgc gccgcctgcg
    26041 gcctgaaatt gtgacggcag accgcaagtg ggatcagatc gatgccgacc tgcagcagcg
    26101 cgtgctggcc atctatgagg tgatgcgccg ccagtacggt tacgagatgg tgctgatcga
    26161 gggttaccgc agtccgcagc ggcaggccga gttgatggcc ggaggcaagg cgacacgtgc
    26221 cggcgcctgg cagagctgcc atcaatatgg gctgggcgtg gacagtgcgc cgatccggga
    26281 tggcaagctg cagtgggaca tgaacgacga gtggaccaag cgtggttact tcctgtacgg
    26341 cgagctggct gaacaggcag gcctggactg gggtggaaac tggcgcagca tcaaggatta
    26401 tgttcacgtg gaaatgacag cgcgttgccg cgcggcccgt gcggccaagc gtgaagaact
    26461 gtcacgccaa gggtgataac cgcatggcgg tgctggtatg gttaccgcga tgatctgggt
    26521 cgccggggaa cagggggcga tggagcgcca ggtcacacag gatcaaggag catgatggat
    26581 ggcacgaccg tttatcgtcg tcggtgacaa gctcagccac ggaggcagcg tggtggcagg
    26641 caccggccag accgatatca atggcaaggc ggtggcccgg gtgggcgacc gtgcagtctg
    26701 cgccgtgcat ggcgcaacct cgattgtcag tggtgacgca accgtcgtga tcgatggtca
    26761 gccggtggcg cgcgatggcg accgcacggc gtgcggagcg acgctgatgg cgtcacaggc
    26821 caccactggc ctgcgctgaa cgacgcggtc gacgggagca gcgcatggag cacggcaact
    26881 gatggcggga tggctgggca aggcagcgtc ggtggtgatg gtcttcatcg ccacctgggg
    26941 cgcgacgatt ctttactggc gcaacagcgg cacggtaccg accggcatgc agatgctggc
    27001 ctatctgggg ctgctgccgg tggggctgag tggtgccggc ttcatgctgc gcaacgccgc
    27061 gcggcgcggc gccgatgtgg cgttgcagaa agccggtgag gatcgttccg gcccggcccc
    27121 ggccgaacgc gagagtgtcg ctggcgcccc gtcgggcgtg cctgccgttg cgttgctggc
    27181 cggccacctg cgcctgggca tggacctcga tgcgcaggcc ctgctggcgg ctgcggcggc
    27241 gccaccgcgc ccggtgctcg acgggcgttt ccgcgacaac tacaacctgc cggtgcggat
    27301 gagcgcagca cctgatctgg acgaattcga agtcctgcag gtgcgccagg acggtatcga
    27361 taccgccgcg cacgaacggc gtgcactggc gctgctgcgg ccggtgctgg aacgcctgct
    27421 ggaggccgcc ttcacggccc tgccggagat cgaagcctcc gaagaggtgg tggtggccgg
    27481 cctgcgccgc cgcgatgagc agcgcgttga gaatgtcctc accctcgaat tgctggtgcc
    27541 gggcagctgg tccgatggtt tgcgcccgtg ggtacaggag tggctgcagc aacaggcgca
    27601 cgatgccggc ctcgatgcgc gccgcttcga cgtgcgcatg accgtgctgg atggcgcgcg
    27661 cgaggtgtgg ccgcatgtgc aacgggtcat cgatgcgctg gcgtcgtcgc cgacgccacg
    27721 ctggcacctg ctgttggcgg ccgcgtccag cattgatgcc ggcatcgtct cggcctggca
    27781 gtcggccggg gtgctggcga cggcgcagcg caccgatggc cacgtacccg gtgaaggcgc
    27841 agcgggcgtg ttgctggcca gccaggctgc tgcacgtgaa ggcgacgccc ggctgtggcg
    27901 accccagctg gtcagtgccg agcaggtcga ggggcagcgc ccggcagaac agcgtcggca
    27961 gctggcggcg ctcgccaccc agtggcatgc atcactggcg accgatggcg cccaggccca
    28021 gttcgtactg cacgacgctg accaccgggg cgacctgatg gtggatgccg ctgccatcgc
    28081 tgccaccctg gcacccgatc tcgatttcag tccgcagagc ctggcgctgg ccatcagcgc
    28141 cggcgaactg ggcccggcgc tgccgctggc ccagctggcg ctggcccacg cgcagcttca
    28201 gcgccagagc gaacctgtgc tgctgctcgg tgtcgccgac aaccagcagc gcctgttcgg
    28261 gctggtcgat cctcttcctt ccccgacgct gacggccgag gcgccgtccg ctccctgacc
    28321 cctggatccc tgcatgagtt tgagcaattt cagctactac ctgcgcgact accgtctgtg
    28381 gatggtgatc ggcctggtcg gtgccgctgc gctggcccac tacggcgagg ccgaggcacg
    28441 gcagatcggc atctgggtcg ccatcgtgct ggccggcctg ctggtgctgg cgctgctggt
    28501 ctgggtcgtc aagcggatgc ttgcccggcg cgccgccaag cgcgtggagg caatggtcaa
    28561 ggacgaggcg gacaaggcgg tagccagcgc gcagccggca cagcgcgccg ataccgaagc
    28621 gctgcgtacg cgcatgatgg atgcggtcaa gcagatcaag tcctcgcgga tgggggtgct
    28681 gaagggcaac gccgcgctgt acgaactgcc ctggtacgtg atcatcggca acccggcggc
    28741 cggcaagagc accgcgatcc tcaattcggg cctgcagttc ccgttcgagg acaaccgcgg
    28801 caacgtcgtg cagggcatcg gcggtacccg taactgcgac tggtacttca ccaccaacgg
    28861 catcgtgctc gacaccgccg gccgttactc ggtcagcgtc gaggaccggc tggagtggct
    28921 gaccttcctc ggcctgctga agaagaaccg tccgcgtgca ccgatcaatg gcgtgatcat
    28981 cgccgccagc ctggccgagc tgtccggcag caagccggag ttcgccatcg aactggccaa
    29041 gaacctgcgc cagcgcgtgc aggaaatcac cgagcgcctg gaagtattcg cgccggtgta
    29101 cgtgctgttc accaaggccg acctgatcgc cggtttcagt gaattcttcc gcaacctcga
    29161 tccgggcgag cgcgagcatg tgtggggcgc tacgctgccg ttcgacgtgc agcagcaggg
    29221 tgacgcgctg gccgccttcg acagccactt tgatgagctg gccgaaggca tcaaggaaat
    29281 gagcctgacc cacatggcga tgcagcgtgg ccgtgaggtc tcgccgggcc tgctgtcgct
    29341 gccgctggag ttcgtcggca tcaagccggc gctgcgcacc ttcatcgcca ccctgttcga
    29401 agacaacccc taccagttca agccggtgtt ccgcggcttc tacttctcca gcgcgctgca
    29461 ggaagggcgc tcggtgcatc acgcctccga gcgcgtcggc cgccagttca acctggagcg
    29521 cggctcgaac gtggacgagg cgccgaccgg gcataccgcg ttcttcctga aggacctgtt
    29581 ccgcaaggtc atctttgccg acaaggaact ggtgcggcag tattccagcc cgcaccagaa
    29641 ccgcctgcgc tatggcgtgt tcctgggcgc ggtgggcgtg ctggccctcg cgctgggcct
    29701 gtggacgtgg tcgtacacca ccaacgcgca gctggtggcc aatgccacga aggacctgga
    29761 ccaggctgtg cgcgtgcaga aggaccgcat ggacctgaag tcacgtatcg atgcgttgct
    29821 gctgctgcag gaccgcatgg agcagctgga ccgctatggc aaggaagggg gcatcaccac
    29881 ccatctgggc ctgtaccagg gcacggccat ccgcgagaag ctgctgcgcg agtacaacca
    29941 cggcatgcag caggtgatgc tggcgccgac cgtatcgaac ctggagaact atctgggcca
    30001 ggtggtcgcc gagcgcgaca agctggggca gggcaccagc agcgctgccg agagcgaggt
    30061 gctgtaccag aacgcgtcgc cgaccagcac caacgatgcc tacaacgcgc tcaagaccta
    30121 cctgatgctg ggcaacccca agtatgtgga gggtgcgcac ctgtcgcagc agctgaccct
    30181 gttctggcgc acctggctgg aagccaaccg cgggcagatg agccgcgagg aaatggtccg
    30241 cgcggctgag aagctgatga ccttctacgt ggcgcaggcg ggccagccga gctggccgca
    30301 ggtgcagaac aaggtcaccc tggtgtccga cacgcgccag gcactgggcc aggtgatgaa
    30361 gggccagccg gcgatggagc gcgtgtacgc gcagatcaag gcccgtgccg gtgcgcgctt
    30421 caccaccacc acggtcgaca gcctgatcgg cgtcgagcgc aacggccgca tgatcaatgg
    30481 caactacgcc atttccggtg cgttctcgcg caaggcgtgg gaagagtacg tgcaggatgc
    30541 gatcaaggaa gcggccaaca cgcagctgag caccaccgac tgggtgctgg ggaccaccga
    30601 gcagagcgat ctgtcgctgg ccggcagccc ggagcatgtc tcgcgcgagc tggtgaacct
    30661 gtacaagaac gactatgccc gcgagtggac ccggttcctg cagggcctga gcgtggcgga
    30721 gttcagcacc ttcgacgagg cggtggcacg catcaacaag ctgggcgatg ccagcaattc
    30781 gccactgcgc gtgctgctgg agcgcatcaa cgaagagacc gtgtgggaca acccgcaggc
    30841 gctggcccgc tccagcaagg cgcgcaaggg cttcgtcgcc tggttccagc gcaccatcct
    30901 gcgcaaggac ccggccgccg cggctgcggc acagccggtc ggcccgatcg gcaaggcgtt
    30961 cgagggcatt gcgcgcttga ccagcgagcg cggtgaccag ccggccgtga tcacggccta
    31021 cttcgacacg ctggccaagc tgcgcgcgcg tctgaacgcg atcaagagcc agggcgagat
    31081 cggggtcgct acccgcaagc tgatgcagga caccttcagc aacgaaggtt ccgaactgag
    31141 cgtgggcctg gcgctggtcg atgagcaggt gctgaccggg ctggacgaga agcagcgtga
    31201 agcgctgcgt ccgctgctgc tgcgcccgct gacccagacc ttcggcacgt tgatcgcgcc
    31261 gaccgagaat gaagtcaaca agacctggaa ggcacaggtc tatgatccct tcaaggcacg
    31321 catcggccag cagtacccgt tcaacctgaa ctccgacgtc gatgcggcgc cgagcgacat
    31381 tgccggcatc ttcggcgcca gtggcagcat cgcggccttc aacaaggagg cactgggtac
    31441 gctggtgatc cagcgtggcc cgctgctgga gacccgccgc tgggccgggc agggcgtgaa
    31501 cctgtcggcc gaactggtgg ccaactacgg caactgggtg agtggttcgg cggccggtgc
    31561 ggcgcaggac accacgatct tcgagatcct gccggcaccg gcggccggcg cgctggaata
    31621 caccatcgag atcgacggcc aggtgctgcg ctatcgcaac acgccaccgc agtggacgac
    31681 catgcagtac ccgaacgtcg gccaggtgcc gggcgtgaag atcaccgcgg tgaccggcga
    31741 tggcaggacg gtggaagtgt tcagtgcgcc gggttcgaac ggcgtcaacc gcttgatggg
    31801 ggcgggccag gtcgagcgcc tggatgactc cagccgcatc acctggacgg gcaacggtgt
    31861 gtcggttccg gtggagatgc gcatcgtccg tcgtgccggt gaggccgcac agggcggagg
    31921 cgactggcag cgcgggctgc agttgcccga acgcgttgcc ggtggcgagc ccgctgcgca
    31981 ggcggcaccc gctgctgcgc cggcagcgac gccggctccg gccactggag gcgcccgatg
    32041 agccgggtgg tcagcgcggg cgtgtcctat ttcggcaagg tgccctcgcg cggcgatttc
    32101 gtccgcgcgg ccgacaacca ccagctgctg ggctggcttg accgctgggc cggcgagagc
    32161 ctggaactgc tgagccagag cccggactgg aagcagcgct acgacgaagc gcccgagatc
    32221 cactatgcct tcctcggttc gcgcagcaag atggtgcttt gcggccactt cctggccagc
    32281 cgcgacgcgt ccgagcggcg cttcccgctg ctgtcggcgt tgcgcctgga tgcgcccgag
    32341 ccgttgccgt tcatcggccg cagtccgttg gcgatgtcca acgcctggtc gggcctggcc
    32401 aggctcgcac gccaggccta ccaggacagc gacgcagcac aggcgctggc acagctggcc
    32461 gacgcccgtt tcagcatcag caccgacccg ggtgactaca acggcagctt ccaggatttc
    32521 ctcgagaaca ccacggtggc cgacctggag cagcgcctgc gcgagtccgg ccacggcgac
    32581 gtggcactgc gccaggtgct gcccgcgctg ggcctgctgc tgcagccggt gctcagtggc
    32641 ggcgacgtca acatcgacaa ggcgctggtg ttcccgctgg tgcgtgatcc ggcctaccgt
    32701 ccgctggtgg cagcgttctg gctggacctg ctgtccagct tcgtcgcccg tggcgatttc
    32761 gaacttgccg tactgatccg caacgacgct gcgccaagca tgatcgtcgg cttcaacggc
    32821 gctgatcgcc aggtgctgcg cgccgtgctg gatccggccg aggccggcga cttcctgatc
    32881 cgcatccagc attcggagtg ggtggacgac tacctgcgcg gcgactacaa cctcaaccgc
    32941 ttcggcagct tcctcgaccg tgacgacctg gccctggcca ccgcacgcaa gctgttcggc
    33001 gagactttcc tgggaacctg acgatgcgcc tgtgcaaacc tctccatctc atgctgccgc
    33061 tgctgctggt ggccgcgccg ctggccgcgc agaacgcgcc ggcagtggcc gccggcgagc
    33121 gtccggtggt catcgaaggc gtggtgcctg accaggcgac caaggccaag ctgctcaaca
    33181 acctgcgcgc ggtctatggc gccgagcggg tggtcgaccg catccaggtg gaaaccatcg
    33241 ccacgccgcc gaactggggc gactatgttt ccggcatgat caatccgggc ctgaagcggg
    33301 tgtcgcccgg aaagctggag gtcaatggcc aggcggtgcg cattaccggt gaagtcggca
    33361 acgaagccct gcgccagcag gttgccagtg acctgagcct ggccagcaac accagttaca
    33421 cggtgacaaa cgcgctgaaa gtgggctcgc agcagaacgt gctggaccag accctggcca
    33481 accgcatcat tgaattccag agcggcagcg cgcgccttac gccgttcggc atgagcatcc
    33541 tcgacgagat ggtggcgaag atggcgcaga tgccggacag ccggttcctg atcatcggcc
    33601 acaccgacaa tgtcggccag cgtgagtcca atctcacgct cagccatgca cgtgcgctgg
    33661 cggtgaagaa ctacatgatg tccaagggca tccccggcag tcacatggac gtgctgggca
    33721 agggcccgga tgagccggtg gcggacaaca ccagcaacga cggccgtgcg cgcaaccgcc
    33781 ggatcgagtt caagatccag taactttgcc cggggagccg gtcaggctcc ccggccgtga
    33841 cgcgcagctc agtcttctgg attgacgtcc agcatttctt ccatctgttc cagcgtgccg
    33901 tggtccttga tgacccgctt gagccagacg tgcagcggca tctcgcccca gcgcgctgcc
    33961 ttttccgcca gataggcgac cgggctgtgc ggctcggtac ggcggaagaa ctcggcgacc
    34021 tggcgaagct gctgcaaggc ttccttgcgc gaacccggcg caccggcggg gccgcgcgag
    34081 ggcgcagccg gcgtcgtctc gaacgtgggt gcgtcttcgg cgaaatggct gtcactgaac
    34141 gggtcttcca ccgccccggt ctcgccatca agcaacactc cggcctcgcg ggcaaagcgc
    34201 agcacggtgc gctgcagatg ctccagttgt tcgcgtacgg cgctgaagct ggggccgtcc
    34261 agccccagcc ggttgtccac tgccgcctgc agttcggcca gggcctggct gcagtcgggc
    34321 aggtcatccg ccagctggcg gtagaacccg tgctgggtat cgcggcgggc ggcagtgagg
    34381 atgtccaggc cgggccggcc gtcatcgtcc tcgccactgt tggcgcgggc gtgggcatgc
    34441 tcgaaatcgg tcaggctgaa gcgcccctgc ggggcgacga tgatcggcac cgcccgcagc
    34501 cactgcagcg aattggtcag cagccagctg aggttgccga tgcgttcttc gaagtcgccg
    34561 tccggagcct gaggatggac ctcatcccag aagcggtcgc acagcccggc ggtgacccgg
    34621 tagccagcag ccaggccctg gaagccttcc agctgagtgg ccgcctcgct gagccagccg
    34681 gccagtcgca ggtccttggt gcgggtctgc agcaggctgt cggcctcgcg cagcacactg
    34741 ctccagtcgg cgtacttgat gtcggtctgc cacgcaccct ggtccagggt cgggtcgtcg
    34801 gcacgacggt tttcgatgat ccgatcgaat tccgccgaga acgacaggtc ttcaccggtc
    34861 ggggcgtttt ccgaaatcgg ggccagcagg gcttcctgat ccagcatggc aggtctcgtt
    34921 ggggactgcg gacgattcta gccgttgaat gtgaacgcga ttacgggatc cgggcaagtg
    34981 cctgtagctg aatacgttat tccgtcggtt atgtgacgca aagcgcagtt cgtcgcgcaa
    35041 taacgcgccg tgattttgac gaacacgctg ttctggtaga ttcgggaact ggaaaccgac
    35101 gccattccgc atggatctgg cgtcttcact ctggaaatgg catggatcag ctgaattacc
    35161 tgatgacgca ggttgcaggt cttggcgatg cgcagcgcct gtatcgtctg cagtcggaag
    35221 cattcacggg atgcaccgtg gagcgctggc gtggacgtga cgcgctgggc gaacacgcat
    35281 ggaccgaggt cgaggtgctc tgcactgatg ctggcctcga actgggggca ttgcctgcca
    35341 cgcgcgcaac gttgatcacg cagctcgccg acggcgggca gtggcagcgc agcgggctgg
    35401 tggccgacgc cgcgcgggtc gggggcgacg gtgggctggt gcgttaccgg ttgcacctgg
    35461 tgtcgtggac ctggtggctg cagcatgcgc gccacagccg cgtgttccag gagcaaggca
    35521 tccgcgccat tgtcgatgcg gtgctttccg cacacgccga catcgcacgc tggcgctggg
    35581 ccgaaggcgt cgacgccttc ctgggtgagc gtgtacgcag ctactgcgtg cagtaccgcg
    35641 agagcgatct ggacttcctg cagcgcttgc tggctgagga aggactgggc tggcgcttgt
    35701 atccggacga ggaagcgccc tgtggcaatg gcctggagat ctttgccgac agcgttgcgc
    35761 tgcccgagga tgccaccagc gccggggccg gcgtgcgctt ccatcgcagc gatgccactg
    35821 aaaccagcga cagcgtgcag gccatcggcc tgcaccgcag cctggccagc acgacggtca
    35881 gcctgcagag cgatgattat cgccaggtgc gtgcactgtc gggccagtcg ccgatggaag
    35941 gcggcggcag cgggtccacc cgcgaggatt tcgatgcggt gggcgcctat gccttcagcg
    36001 atggcgcggc cgcatcgcgc caggcccgcc tgcaggcgca ggcgcgcgaa gcacgcagtc
    36061 gacgctggca agggcacggt accgtgcgcg gcctgcagtc gggaagctgg ctgcggttgc
    36121 agcaggcccc gggcggtaca ccgccggagc tgctgctggt cgcggtcgac catgccggca
    36181 tcaacaacct gcccaccgac ctgcgtcgca gccttgatga cgcacttggc gtcgcccccg
    36241 gagacagcgc agacgccgca ctgtggcagc aggcggaggc gattggctat ggcaatcgat
    36301 ttgaggcggt gccgcgcgcc acgccgtggc gaccccagct gctggatggc accggggccc
    36361 gcctgaatcc tcgcccgacg gtgcccgggt accagacggc agttgtggtg gccggccatg
    36421 gaagtgacag caaggacctg cacgccgaca gccacggccg cgtgcgcgtg cgcttccatt
    36481 tccagcagga gcagggcgag ggcgctcatg acagtgcctg gttgcgcgtg gcacagcgct
    36541 acgccggccc cggtgttggc agccagttcc tgccgcggat cggtcaggag gtgctggtcg
    36601 gcttcctgga cggtgacatc gatcggccgc tggtgctggg ggcgctgtac aacgggcgcg
    36661 gtgaggccgg cgtggcgccg acgcccgcag gtgccagcag cgagggcgat gtctctgcct
    36721 acggccaggc cggtgatgcg cgccacagcg cacaggccaa cctcagtggc ggccaggcgc
    36781 cggcatggca cgcagcaggc gcgggcgacc aggcgcatcg gcagggcgga gcactctggg
    36841 gtatccgctc gcgtgaatgg gacggcggtg aaggcagcaa ccacctgttg ttcgacgatt
    36901 cgaaccagca gctgcgtgca cagctggcca gcagccagca ggtttcgcag ctgtcgctgg
    36961 gtcacctgcg gcaccaggct gacaactatg taggcagcgt gcgcggcacc ggcttcgagc
    37021 tgcgcagcga tgcctggggg gcggtacggg cgacggcggg cgtgtggttc accgcctatg
    37081 gtcatcgatc aaccgcacct gcaggcgagg cggtgcagcc cgccgcgctg ctgacccagc
    37141 tgcaggccct gggcgagcgc ttcacccagg ccgcgcgcac gcatgtaacc agtccgttgg
    37201 cgatgcagga gggggccaag gccgcggcgc gctccaggat ggtggccgac aagtcaccgg
    37261 tccccggctt gctggcgagc gtgcgcacca ccaccggtgg cgatgatttc ggcgcaggaa
    37321 agggcagtgc ggccgagcgc gcgtccgagg cgggcgaggg cagggtgccg cattccggcg
    37381 acccgctcct ggggatggct gctccgcagg gcgttgtgca ggtggcgggc caagccatgc
    37441 actggagcag cggtgaaggc ctgctgctgg ccagtggcag tcacagtgaa gcgatcacga
    37501 tggggcaggc gcggcttcat gccgggcaag cgatcggagt gcttgcatcc gtcgttgaag
    37561 gggccgccgc cgctccgacg gcacttgacg tggtggccgg cagcgaaacg ctggacatcc
    37621 aggcgcatgc agacctggtc cgcatccagt cgcgtggtgc gctgcgtggc gccagcgcgc
    37681 aggcaccggt ggagctcgcc gcggccaaca cgatccacgt cgcgacgtcc ggaggggcca
    37741 gcctgaccat cgctggcggc agcattacca tcgcttgccc cggcacgatc accgtgcatg
    37801 ccggcagcaa gtcatttgtt gggccggccc aacagggcta tccgcttccc cagttcccgc
    37861 gcagcagctg caagagctgc attctcgacg cgatgcgcca gggcacgccg ggagtgctgg
    37921 tgtgatgaat cgttatgcgg tgatcgacag cgcgcagcgg ccgcatttcc atgagcggct
    37981 ggagcgcctg ggcgcgcact atcgctcgct gttcgagggc acggccgagg cgagcctgct
    38041 ggatatcgct cccttgctgg tggcctggca ggacaccgcc gtgcacacca ggctggatgc
    38101 ggagatccgg cagatgggga cgcagcggcc gggcgtgacc ctgctgtgga gtgcgctgga
    38161 tctggacgag ctcgccaagc ggctgaggac cttccatctg gtcaaggtgc ccgagaaggg
    38221 cggtcgcgaa atgctgttgc gctggtacga cacccgcatc ctgcctgcgc tgctggaact
    38281 gctggtgccc gcgcagcgtg ccgcgttgct ggagggcgtg cagcgcctgc agtacttcga
    38341 tcgctatggc gatctgcagg aatggccgct ggccgaggtg gacgatgccg gtctgcctgc
    38401 gcttccgcca ttgcgcctgg accagcagca gtacatgcgc ctgctggacg cgtgcgagcc
    38461 ggatgtggcc atcgcccagc tccgccgggt cattcccgat gagatgaagc gggtgcctta
    38521 tcgctcgctg tacccgttcg tcgtcaagca tatgcaggac acgatcgcgc acggcgtgga
    38581 ccaggtggac gatcacgtgc agtacctgtt gctggcgctg tacacctcag gcgcatgccg
    38641 ggaacattcc gccgtgcggg cccggttttc gcagggggcc agtgcctttg aggcttcgtt
    38701 cccggattgg gcgtcggcct tgcctgacga tatctggttg atgggcgttc cattgtggga
    38761 agcccccacg gccttgccgg ccgaagcggc aacaccactg aactagagga acaaccatgc
    38821 gtttgatgcg cactcaactg ctggcggcct tggtattgct gctcctggtg ccagccctgg
    38881 ccgcgtgcaa ggggcggaca gcctccacac cggtggctgt gctgggctac aaccataacg
    38941 atgcctacat cgcgcagttc cttgtgaacg gcggcagtgg cgggtcggcc gattcccact
    39001 cggaaggcgg aacggtgtgc tgcgcgatgc tgcctgatcg atggacaccg gatatgaagg
    39061 tggagatcga atggacgacg gatctcgaaa cgttccagaa ggcgactgtt gcagttccaa
    39121 agtacgacca gcccggaaac ctggcggtcc atttcctgcg caacggacag gtcaaggtct
    39181 ttgttaccgg tctggtgctg ggtcatcccg attatccgtt gaccggccct gaagcgccct
    39241 tgcgcgaagg cgagaatccg gtgtgggagc accttcggcg ccccctcgaa agctgatcag
    39301 agggccaggc gcgaatgatg acgtcagcaa ctacatcggg aataaagatg ctggaaacca
    39361 gaaggcaaca gccatgacgc gctgctcggg tcgctgctgc accctcaagg acaagaagaa
    39421 atgatcccac gattcgtgcg tacacatcac attatgcgtg ttccgctgct gtccgccctg
    39481 gttgtgctgc ttctgctgcc ggtactggcc gcctgcaagg gccagcccac ctctacacct
    39541 gtgggagtgc ggggctacaa ccataccgac cagtccattg cgcagttcca ggtgaatggt
    39601 ggaagcggag gatcggctcg acgtcactcg gcaagcggca cggtctgctg cgctgttgtt
    39661 cctgaccgat ggactccgga tctgaacgtg gagatcgagt ggacaactga tctggaaacc
    39721 taccagaagg cgacggtatc aatccccagg tacgacgagg ttggcagtct cgctgttcac
    39781 ttcctgcgca atggccaggt caaggtgttc gtgaccaatc tgatactggg gcacccggac
    39841 tatccgttga cgggacccga ggcgccgttg cgtgaggggg aaaatcccgt gtgggagcac
    39901 ctccggcgcc cgcccgctgg ctgatggtaa gcggggtggg atcaacaggg acaagcaatc
    39961 cggcagggac ggacatcgga acaaggaggc aaggacatga atgaacgcac ggcgactggc
    40021 gcgcagccca tgcccgccaa cggacagcgg gccctgagcg gcgctgaggc acagcggcgg
    40081 gcgaaggcga tggcgtgcct gcgcgagaag ggttcgcaat gccagggcca ggtgcatgtg
    40141 agcatctact tcgatggcac cggcaacaac cgtgagtggg aaggaacctt cgtcaccggc
    40201 aagacacgcg ccacccgcac ccagcttgca cgcaacggcc acagcaacgt ggcacgcttg
    40261 tacgacgcca acctggccga gccggagaac ggcttcttca gcgtctatgt tcccggcgtg
    40321 gggacgccat tttccgaggt cggcgatacc aaccaggatg gcgacacgct gggaggaggg
    40381 gctgcacgat acggtgccga tcgcatccat tgggcgatcc tgcaagtcat caactcggtg
    40441 catcagtacc tcaaatccaa tgatctgatc acgccggctg aagccaagat cctggtcggt
    40501 tcgatgagcg agacgcgcct gctggaaggt atgacgcgcc gcgccatgct gaccggaatc
    40561 gcgcaacgcc tcgagcgcgt ggtgaaaagc caccagcgtc gcgtcacctc tgtgcacgtg
    40621 tccgttttcg gtttctcgcg cggtgccgca caggcgcggg cgttcgtgca tcggctgtat
    40681 gaaaccgccg aggcctgggg cagcggctgt ggctacaaca tcgccggtgt tccgctctac
    40741 ctaaatttca tgggtatctt cgacaccgta gcatcggtgg gcgttgctgc catgagccgg
    40801 gtatccaagg gcaaatggga ctgggccgcc ggtgacatga tgagcattca ccccgaagcc
    40861 cggcaatgcg tgcatttcgc tgccctgcat gagcagcgca tcaacttccc gctggatctg
    40921 gcgaccagcg ggaaggaagt gctttatccc ggcatgcatt ccgatgtcgg cggtggctac
    40981 tcgcccggcg gccagggcaa ggatttcgtg tcgggcgcag cgaacggcaa ggccaagctg
    41041 tcacagattc cgttgatcga catgcatcac gaagccatca aggcgggtgt catgatggag
    41101 acgatcaccg aactcaacga ggacccggcc tatgccacgc atttcggctg ccacccacag
    41161 ctgatccgcg attacaacgc ctggctgacc ggccatgggg tgcctgcagg cgcacacaca
    41221 cagcagatca ccggtcattg tcggcagtac gtggcctgga agggcaagcg cctgcccaac
    41281 ggcccacaga gcttgctaca gcagccgttc ttcaagcagt ccgatgcaga ggatcaggtg
    41341 gatctggcca acgcgcagcg cgactttgcc aatctggtca ccgagctggc ccaaggcaag
    41401 agcgacatgg cggcttaccg ccgccagctg gatgaaagcc agaaacgcat ggacgccgga
    41461 cgcaaggccg gacgtccggt gttcgagcca accccacgag cgtccgctgc ggcctacacc
    41521 tacgcaggca ttcccgccga aaccagcacc ctgctggacc tggtgctcaa cgctacgccg
    41581 gtgcctgatg tcagcaccaa cctgttcgac aattacatgc acgattcgct ggccggcttc
    41641 tacatgatga agtggacgga gctgaacatt ccgcgcctca atacctacgg ctacctgcgc
    41701 tatcgcgagg tcttcagcgt cgccggcagg agggcgcagg agtgccgcga tcccgccacg
    41761 ctgccgcccg cgaatatccc ctccatcggc ggcgcgttcc agcagctggg aaccgcaatg
    41821 ggcggctgac cggtgaagat ggccgggttc gtgagtcgag cggcgcttgc ggcagcaggc
    41881 gtactgcttt cggcgagttg ccatgcgcag ccgcccgacg tgggcgggtg gcgccgggtc
    41941 tccgacagtg attacgtgcg gcacttccat ttctccatgc ttccccatgc tgcaccggtg
    42001 ggaagtcgct gggcgatcta cgacgccagg gcaggccggg tggtgtgttg cctgtcggtg
    42061 caaggcgccg aggtgagtga aagcgagctc caggaccgct tgcacattcc ggggccgtgg
    42121 gtgaccgatc tgaccaatgg ctggaatctg gatgccgcac cctatcgtcc gcatgtccag
    42181 ctgctgaagg cgcaggatgc gatgggcagc cataccttca gggaagaggg cgacgcagcg
    42241 ggtggcctgt tgctgccgcc agatgcgcgg gtggtggggg cggatgcgct ggagattgcc
    42301 ggggagcgct atacggtgca gcgcgatgaa acctcgctgg ccgatggcga tggtggcgta
    42361 cacacctaca ccttgaaacc ggccaggggc ggtgcagccc tgagggtcga ggtgcctttc
    42421 ggaacctatt agcgggcatg cctgcttcgt tgccgggctg gaaccggcgc cgccgcgcct
    42481 ttgcccgtcc ccacatggca gccgctgcat cttcatggca tcctcacgaa actgattggc
    42541 ctggtgccat cgacggatga acaacatgca caactggatc gcacccgcgg ccggcgcgct
    42601 gatggtggcg ctttgcctgg ccgcccccgc ggcacaggcg gccgagccga ccttcggtgg
    42661 ctggcgcaac ctgggctcgc gcgatggcgc cgagccggcg ttgcgggatg tgccgttcgc
    42721 gctgctgccg gtgccggcga gccgtgacgc ccgtttcgcg atctacgacc gcgaaagcaa
    42781 gcggctggtg tgttgcctgc aggtggccag cgccgaactg gacgatacgg cgttgcgcaa
    42841 ggtctaccag ctgcccgaac agtgggtgac cgatctgcgc aacggccgca gtacggcgcg
    42901 gccgtggccg acccgggtct acgagatgcg gcgtaccgat gaactggtcg actacggctt
    42961 cagtgatgcg cccgaagcct acagcgatct gggtgggctg ctggttccgg ccaacgcacg
    43021 gctgctgccc gatggcagcg tgcaggccgg gtcgacctac cgcctgcagt tccgcagcac
    43081 gccgctgggc gacgacagca gcgcgctgga ccgcttcacc ctgcagccgg cccaggacgc
    43141 gggcaagccg gtggtggtgg aagtgtcgta cggcacctac tgacccagga cagtgatccg
    43201 gcggaacggc gggatcgcca tggaagcgat tcggcgcgac cccgcatatc ccgggcaggg
    43261 caaaggaaag cttccatgcc gccggcgcgg tgcgtggctg ggagggcggc tacactacgg
    43321 gccgcggccg ttggccgagc cactgacgtg agtgccgtgc cccgcctgtt gctgctgttg
    43381 tccctgtccg cgctggctgg ttgtgccagt gctccgccac cgccggccca ctccgatgcg
    43441 ttgtggcggt tgatcgagcg tgactgccgc ggggccgaag gcccgcgtgg tgactgcctg
    43501 caggtggagg cggcggtgga tcggcgcgat gtgctggtca aggacgcgca cggcgactac
    43561 cagttcctgc tgatgccgct ggacaagctg agtggcatcg agaaccgcag cctgtaccgg
    43621 cgcggcgcac cgaattactt cgccgccgcc tggcaggccc gcggccatac cgagcgggcc
    43681 ctgggccaac cgctgccgcg cagcgtggcc agcctggcgc tgaattcacc gcatgggcgc
    43741 tcgcagcatc agctgcatat ccacatcgac tgcctgcgtg cagacgtgct gcaggccctc
    43801 gatgcgcagg cggctgcgct gggcacagag tgggcgccac tgccggtgct gctgcgtggc
    43861 catcgctacc aggcacgcct gctgccgggc gcggagctca ccgctaatcc gctcaacctg
    43921 ctggcctatg gcctggcagg cgtggacgat gtgggccagt ggagtctggt ggtggcgggg
    43981 cgtgaccggg tgcagggtgg cccgggcttc atcctgctgg ccacccgtgt ggacgcggaa
    44041 accggcaacg aggccagcgg agaagagttg caggaccacg cttgctcggt gctgaccggt
    44101 gccggcgatg tgctggagcg ggtgcgctag tccgccacct gcaggccgct gcgccacgtc
    44161 ggcgcggtca gtgcccacag ctggcgatcc tgccagccgt ccatgtccag atgatggtcg
    44221 cgcagcaggc cttccaggtt gaaaccgaag gcgtgcagcg cgttggcgaa cggcgtgttg
    44281 ccgtccgggg gcagcatcac gaacaggcga tgcaggccga cgccgtcgaa caggaacggg
    44341 cacagtgcct gcagcatggc gtcgacatgc ggatgcccgt gctgcagcga tagcagctcg
    44401 acgcagcgcg cctcctgcga ttgcaggcgg atgtgcagct ggtccagcac cgtgccgtgt
    44461 tcgtcatcga agacgcccag cagcagctgg tcgttgtcct gctccaggcg tgagcgatgc
    44521 atatgggcga ggaagcgtgc ttcctcgtcg atgccggacg gggggtggcg gccgcgctgc
    44581 cgacggtcgt cgaacaggcg ccaacgcggc agatcggtgc gctggaacgg gcgcagggtg
    44641 atcggcgcca cctgcagctg cagcagatgg cggcgcagca ccgggcgtag cggggggagg
    44701 gcgggggtcg gatatgggct gatcatcccc gcaacgatgg cgaggcccgc agcggcagac
    44761 cattcaaatc gttgcaaaag cgtgatcgct gccgcggcag gtctgattcg gttcaggcat
    44821 aagtccatca gggctggtca tttccgttga aactgcccat tcaggacact ttcgttacgg
    44881 gaacgttatg tgccgatggc cgccgcccgt gccaccaccc actcctccag gaagcccatg
    44941 tccgcctctc acaaggcgct gcgcccgcgt ccgctggtgc tcgcgctgtc gtccctgatg
    45001 ctggtctcgt cgccggcctt cgcgcaggaa agcgcaccca cccagctaca ggaagtgaag
    45061 gtcaccggct cgcgcattcc ccgcgccagc gtcgaggggc cgtcgccggt gacggtgatc
    45121 agccgtgagc agatcgatgc gcagggctac cgcaatgcct tcgatgcatt gagtgccctg
    45181 accgagaaca ccggcaacgt gcagggcgag gacttcggca acacgttcac cccggccgcc
    45241 aacaccatca atctgcgggg gctgggcccg aaccgcacgc tggtactggt caacggccga
    45301 cgccagtccg actacccact ggcctacgaa ggttcggtga acgtggtcaa cctggccaac
    45361 attccgagcg cgctgatcga gcgcatcgag gtgctggctg ccggtgcatc ggcggtgtac
    45421 ggctccgatg ccatcgccgg cgtcgtcaac atcatcctca aggaccactt cgagggcgtg
    45481 gacgtgaacg tgcgcgctgg cggtacccag cagggcggtg gcgacaacca gcgcgtgcag
    45541 gtggtcggtg gcggttccgg cgagcgctgg gatggcctgt tcggcttcga gttcgatgtg
    45601 cgcaaggcga tccacgcacg ccagcgcgac ttcatggatt cgctggacga tgacccgacc
    45661 ggcaaggcgc cgcaggccac cgccatcgcc taccggcgca acgccgccac cggccgcaac
    45721 atcgacccgg gtacgaatgg ctgcgacccg gcgtcgggca tctacggcgg cagtgtgttc
    45781 cgtgccttca acccgcgcca gggctggtac tgcggcagca acgaggctgc cgccagttac
    45841 tggaccgtgc agaccgagaa gcgcaacctc aatgggtatg gcctgctgac cttccacgtc
    45901 aacgagacca ccgacctgtt cgccgatctg gccgtgggca gcgcacgcat caccaacaac
    45961 acccgcgcgc ccacctggac gtcggcccgc aactatttct acaaccagac caccggcaac
    46021 ctggagagct ggtaccgtcg cttcgcaccg gaagagatcg gtggcctgcc gcgcaacgcc
    46081 aaccgcttcc tggaaaactc gtggtcgttc aacgtcggcg cgcgaggccg gatcggagac
    46141 agcgactggg actatgaagc ggtctacagc cgttcccgct acgagaaccg tacccgtcgc
    46201 ccggtactgc tggccggcat caacgaatac ctgctcggcc cgaagctggg cgtgcgtgat
    46261 ggcgtggagg tctatgcacc ggacccggca cgcctgttca agccgctgac gccgaacgag
    46321 tacgaggggc tgtccgatta ccaggaaagc cgcaatgcag cgtggctgca gaccttcagc
    46381 gccagcatca acggccgcct gttcgcgctg cccggcggtg atgccgcgct ggcggcggtg
    46441 gtcgaggccg gcagccaggg ttaccgcaac cgccccgatc cgcggctggg gagcggagag
    46501 ttctggaaca ccagcgccgg catcggtgcc ggtggcgagc gcgaccgcta tgcggcgggt
    46561 gttgaactgc aactgccgtt gctgaagtcg ctgaccacca ccctggccgg tcgctacgac
    46621 cagtaccgtg ccggcggcga gcacctcggc aaggccacct ggagcttcgg cgtggagttc
    46681 cgcccgatcg agagcctgct gatccgtggt accgctgcga ccagcttccg cgcgccggac
    46741 atgaactacg tgttcgccac cgagacccgt ggctacaacc cgggcatgac cgactactgg
    46801 cgttgccgca ccgcaggcca gtcgtatgac aactgcgact acaacggcct gtcgattgac
    46861 tacagcaacc gcgcgaatgc gcagctgcag ccggaaaccg ccaaatccta tggcttcggc
    46921 gtggtctggt cgccgctggc cgggctggat ttcagcgctg actactacga catccgcatc
    46981 gacaacgagg tgaccagcct cgacaccagc cgcatcctgc gcgacgaggc cgattgccgc
    47041 ctgggccgca cgctgggcgg cgaggcgcgt gatatcggct caccgttgtg ccaggacgcg
    47101 ctgtcgcggg tgatccgcaa cccctccaat gccaccgtgc aaccggacca ggtgacccgc
    47161 gtgctgatca acccgatcaa cgcggcgtcc gaatcggtgc gcggcctgga cctgaagggc
    47221 aactggcgct tcgatgcggg ccgctatggc cgcttcacca cgcgcctggc ctacaccgtg
    47281 gtgctggagc acacataccg gcagttctcc gacgacccgg agcgcgacat ccgcaattcg
    47341 ctggatgact accagtggcg cagcaaggcc aacggcagca tcacctggaa ccagggtgac
    47401 tggaccacca cgctgtatgg caaccgtttc ggctcgctgc ccaagagtga tggcagtggc
    47461 cgcatgggtc cgtacatgac ctacaacgcc agcgtgttcc gccagtttgg tgacaacctg
    47521 tcggtgggcg tgatcgtcaa caacctgcgc gacagccgcc cgccggcaga caggaacgga
    47581 ggcggctggc cgttctatcc cgtcggcaac tacgacccgt atggccgcca gtactggttg
    47641 cagctggact accggttccg ctgatcccgc tgcaagcgaa aggcccggca ttgccgggcc
    47701 tttcgccttt cactcagcgt gtggtgccgc tgcgcccgcc gccggttcag ggcagcgcct
    47761 gctgcaggta cgactcgatg acatagctga aaggctgctg ctggcggtcg cgcaacaggg
    47821 cgcgcacttc caggatcacg ccatgatcgc cttcgccgcg cggtggccag aaggtctggt
    47881 cggccagggt ctggcgctgg aagccgagcg ggccgaccac gcggccgaag ggctcgtcgg
    47941 tgctgtccag cacgtcgttc atggccgggc tgaggtggcc gggcaggtac cagttgtcgg
    48001 cctcggacag cacgcggctg ccacagacca gctgcacgcg gcggtagcgc aggccggtac
    48061 cggattgcgc cgcgcccagc gcctgcagca cgtcggccgg tgccggcttg tcctggccgc
    48121 gcacgcgcac cgcgcgcacc cgtgcctgct cggccaggcc gtgctcggcg caccagtgct
    48181 ccagggtggc ggtagcgctc tgcccggaca gcacgcgctg gtgcagccgt tcgaccagcg
    48241 cagccggcgc gatgcgctgc tgtccaggcg gtgcctgcag cggtgcagtg gcggcggcat
    48301 cagtggcgga caggctggcg atcggggcgg cggcaagcag ggacgcggcc tgccagcggc
    48361 ggagacgatc gtggcggtcg gacgggccca tgcggcatca cagcggaaac aggtgcctat
    48421 ggtacccgtt caggcgtgtg cacggcgtgg cagcggccgg ccgtcgttgc ggcattcatc
    48481 gttctgatga atgcatggca tccagatatt tcgttggccg atgggggtgc cgggggcgca
    48541 ggatggcgcc atgacctggc tttgcgggag tttccgatga cgcttcagtt cgtccatggc
    48601 ggcgtggatc gcgacggtgc accgttgcat ttccacatcc gcaacggacg catcagcggc
    48661 ctgaacgcag aaggcacgcc gcgcgaaggt gcggaaagcg tcgatctgag cggctttgcc
    48721 gtcctgccag gcctggtgga cggccatatc cacctggaca agagcttcgt gggtgatcgc
    48781 tggcatccgc accaaccggt gaacagcctg cgtgagcgcc tggcggtgga gaaggcggcg
    48841 gtggcgggcg cggcaccgat ggtcgaccgg gccgaggcgc tgatccgcca gtgcagcggc
    48901 ttcggcacgg tggcgatgcg ctgtcacgtc gacatcgatg gcagtaccgg gctgcgccat
    48961 ctggacgcgg tgcgcgaggc ggcgctgcgc tgtgccgaca tcgtgcgcat ccagctggtg
    49021 gcgttcccgc aggccggggt gatgtcctgc ccaggcaccg ccgcagtgct ggagcaggcc
    49081 attgccgcgg gcgtggaggt actgggcggc atcgacccga ccaccctcga cggcgatgcc
    49141 gaagggcagc tggcgctgtt gttcggcctg gccgagcgct atggcgtgcg gctggacatc
    49201 catctgcacg aacccggcga gaccgggctg gcacagctgc tgcgcatcgc tgcgcggacc
    49261 cgggcggccg gattgcaggg ccgggtggcg gtcagccatg cctattcgtt gggtgaagtg
    49321 ccgctggcgc gcgcgctgca ggttggcgag gcgctggcca cggccggcgt agccatcatg
    49381 agcaatgcac cgggcgacca tccgttcccg ccactgcgcg cgctgcatga tgccggggtg
    49441 cgcgtgttcg ccggcaacga caacatccgc gattgctggt ggccgtacgg caatggcgac
    49501 ctgctgcagc gggcgatgct gctgggctac cgctccggct tctacaccga tgccgacctg
    49561 atgctggcgc tggacatggt caccacccat gccgctcagg tgatcgggct gccgcagtac
    49621 ggccttgcgg agggcttacc ggccaccttt gtcgcggtgc gtgccgacca tggcccggcg
    49681 gcggtggctg cagtgcctgt ggaacgccgc gtggtggtgg acggccgctg gctgtaggtc
    49741 cacgccatgc gtgggtgatg cgatcgaatc cggcgcgcgg ctcacacgta atcgtcggcg
    49801 cgggtcgcga cgaactcctc cagccacgcc agcaggtggg caatgtcgat cacctcgccc
    49861 tgctcgacgc gcttgagcag cagcgtgctg gcgccgatct gcaggctgct gtcggcatag
    49921 cgcagcaccg cgtcgatgcc ccaggcgtcg gtgacctgca tccacgccag gcctggcacg
    49981 cgctgggcca gggtgtcgcc gaacgccacg ccgagtgctt cccagccgtc gccgtcgtca
    50041 cggtcgatca gttcggcgtc gaccacacgc tgcagggtgc tggccggcag cggccattgc
    50101 accggcaggc tggggaaacc ggccgccacg cgtgcagcga tcaacgaccg ctggtgttgc
    50161 agatgggtct gcagggcagc gggcagggga tcgaagcggg cgggaatttc gtcggacatg
    50221 gcgaggcgcc gtggagcacg gaaacagtgg gcactgtatc tggcgatgtg acaccctggc
    50281 gcggcaggat tgttcagata tcgatgtctg atgcgtgaaa cgcatccaca cttggcgcgg
    50341 atctacggtg ctcaatccgg ttcgcgctgc acctgccgcc acaactcgcc cgccagagcg
    50401 cgcaccgcat catcggcatc ggcgcgatgc agcaggccga tctcgtagtt gtcgatcacc
    50461 ggcaggtcgc gctcaccatc gatgatgcgg tgttcacgca tgaccgcgcg gcggggcagc
    50521 aggctgatgc cgatgccatc ggccaccgcg ccctggatgc cgctgagcga cgagctggtg
    50581 aaggcgatgc gccagcgcag gcccagcgct tccacggcgt ggatcatctc gtcgcgatac
    50641 agcccgcgcg gcgggaaggt gaccagcggc agcggatcca gctgcaggca gctgctgcgc
    50701 aggctgtcga tccaatgcat cggctcacgc cggcagtgca cggcctggcg cgtgttacga
    50761 cgctgtttga ccagcaccag gtccagctcg ccatggtcga atccgtgcgc caggtcgcgg
    50821 ctcagtccgc tgctgatctc cagcttcacc tgcggatggc gacggctgaa ggccgccagc
    50881 atccgcgtgg tctgcgcgtt gacgaagtcc tcgggcacgc cgatgcgtac ggcggtctcc
    50941 accgtggcac cggccagtgc ctgggccatt tcctcgttca ggtcgagcat gcgccgcgca
    51001 tagccgagca gggtgtggcc ggcatcggtg ggatgcacgt cgcggtggcc gcgttcgagc
    51061 aggcggtgcc cggccagctc ctccaggcgg cgcaccttct ggctgaccgt ggactgggtc
    51121 gaatgcagtc gcgtggcggc ggtggtgaaa ctgccgcagt cggccaccat caccagcgcc
    51181 cgcaacaggt ccagttcgaa cagggttcta ttcgatttgg cactgtctgg catttgaaca
    51241 tttcacttct ggatgcaagt ggcgacttct accatgcagg aaaggggggc ggcaagcatg
    51301 gcgctgcggt tgtgccggca gcgcccgcag gacccgccga acaggagaaa cgaagatgcg
    51361 tatccatcgt tgccgtcgct ggcccgctcc gctggggcgc ctgctgctgc tgtgcctgct
    51421 ggcgatggcc attcctgcat gttcggccac cgcgggctcg cccgatgcgc gcctgcgcga
    51481 cgcggccgcc cgcggcgaca gcgaggcggt gcgcgcggcg ctggaagagg gcgccgatct
    51541 cgacgctcgc gacggccagg gccgtaccgc gctgctgctg gctacgcatg gcaacaacgt
    51601 ggatgccgcg cgcgagctga tcgaggcggg tgccgacgtc aatgccaagg atgcgttgca
    51661 ggacagtgcc tacctgtacg ccggtgcgcg tggccggaac gaaatcctgg cgatgacgct
    51721 ggcgcacggc gctgatctgc acagcaccaa ccgctatggc ggtaccgcgc tgattccggc
    51781 cgccgagcgc ggccacgtcg ccaccgtgcg cacgctgctg cgcgcggggg ttgcggtgga
    51841 tcatgtcaac cgcctgcact ggaccgcatt gctggaagcg atcctgctcg gcgatggagg
    51901 accgcgtcat gtgcagatcg tgcagctgct gctcgatgcc ggtgccgatc ccgaacgcgc
    51961 cgacggcgat ggcgtgacac cactggccca tgcgcggcaa cgcggctaca ccgacatcga
    52021 agcactgctg cgccagtacg gcgcggtgcg ctgaggcccg accccttcca cccgcacgct
    52081 gggcgtgccc atcaggatgc tgtccatgtt ccgtttccat ttgctgtctc ttgccgtcct
    52141 tgttgcggtg gcgccgctct cggccgcggc cgccgagcgt gccgaccttc tgatccgcaa
    52201 tgccaccgtg gtggatgtcg aacatgccaa cacgctgcct gggcagagcg tggtgatccg
    52261 cggcgaggac atcgttgccg ttggtccgga cgcgaagctg cgcagccagt ggacgaccgc
    52321 ccgccagatc gatgccaagg gcaagtacct gatcccgggc ctgtgggaca tgcacgtgca
    52381 cttcggtggc ggcccggcgc tgatcgaaga gaacaaggcg ctgctgccgc tgtacatcgc
    52441 gcatggcatc accaccgtgc gtgactgctc cggcgacctg cccgagcagg tgctgcagtg
    52501 gcgtggcgag atcgccaagg gcaccctttt cgggccgcgc ctgctcagtt cgggcgcgaa
    52561 gatcgaaggc atcaagccgg tctggaaggg cacgatcgaa gtgggcagcg aggcggacgt
    52621 cgatcgggcg atcgcccgcc tgcagcacga caaggtcgat ttcgtgaaga tcaccgacag
    52681 cacgctgaag ccggagctgt tcctgtactc ggccagtgct gcacgcaagg ccggcttcaa
    52741 ggcttcgggc catatcccga tggcgctgac cgtggagcag gccgtcgatg ccgggctggc
    52801 ttcgatcgag cacctggact atgcgttcaa ggccggcagc aaggacgagg cgcagattgc
    52861 agccgacttc ggcgccggcc gcatcgaccg cgcggaagcc aaccgccggc tcgacgccag
    52921 cttcgaccgc gataccgcga tgcacgccta ccgcgatttc gccaggcgcg gcgtgttcgt
    52981 gacgccgacc ctcaacggtg gccgcatcct cgacttcctc gaccaggatg accacgccaa
    53041 cgacccgtac ctggcctaca tcggcccggg cctgcgcgcg acctaccagt ggcgcgtcga
    53101 ccgtgccgcc aaggccacgc ccgcgcagat cgaagcccgc cacgcgcagt accaccaggt
    53161 ggccgcagtg ctgccgctgc tgcaggaggc gggcgtgacg atcatcgccg gcaccgatgc
    53221 gggcttcctc aactcgtaca acttcccggg cattgcgctg caccaggaac tgcagctgtt
    53281 cgtgaaggag ggcctgagcg caccgcaggc gttgtcggca gcgacccgtt ccggcccggc
    53341 ctggttcggc cagatcgatc gctacggtgg cgtggccatc ggcaaggccg ccgacctggt
    53401 gctgctgacc gccaatccgc tgcaggacat cgccgctacc gaaaagatcg acagcgtgat
    53461 cctgcgtggc aacgtgtatg accgtgcggc gctggacagg atgctggccg agaccagggc
    53521 gaaggtcgcg gcctggaatg ccgagacggc caaggccaac tgatggcgga gttgggcgcc
    53581 ttcattcctg gagagtcgag ccatgctcgg ctcactctgt tccgctgtcc aagtattcga
    53641 tccggttggg attcatccac gcatggcgtg gatctactga tcgtgggatc cgtgcgtcaa
    53701 tcgtggccgc tgtcgtccag gctgatgatg ccgcgccgca gcgcctgagt gaccgcatgc
    53761 gtgcgatcgc cgacgccgag cttgtccatc aggctcttca tgtgcgcctt caccgtctgc
    53821 tcggaaatct gcatgcgttc gccgatgcgc ttgttcgaca ggccacctgc gacgtgccgc
    53881 agcacttcgg tctcgcgggg tgacagccgg tcttccacca cgtgcgcggc gatgctggca
    53941 gccaccgccg gtgggatcgg tgcgcgccgg ccaccggcca ccatgcggat ggtgtcgacc
    54001 agttcatggc gcagcatgtc cttcagcaga taggcactgg caccggcctg caatgcgcgc
    54061 accgcacgca catcgcctcg gtaggtagtc agcacgatga tccgtgcgcg cgggtcgagc
    54121 gcgcggatcc gcacgatcgc ttcaacgcca tccaggcgtg gcatctgcag atccatcagc
    54181 accacgtccg ggtgcaaccg ctggtagcac gcgatggcct cttcgccgtc ggcggcttcg
    54241 ccaagcagct gcagatcggc ctgcgcgccc agcagcgccg ccaggccgtc gcgcagcagg
    54301 gggtggtcat cgaccaccag gacgcggatc ggggcaggga tttcagtcat gcttcggagt
    54361 gctccagggc cagcgccaac gcgatggaag tcggtgatac aggcgccgcg cggggaccgc
    54421 cagcgcaatt tcggtaccca gtccggggcg cgtccacagc tgcagctcgg cacccagacg
    54481 ctgcgcccgc tcgcgcatgc cctgcaggcc ccagtggccg tggccggcgt tctcgtcggc
    54541 gatacccacg ccatcatcgc gcacgtgcag caggaagcaa cgcgtgccgt aggacagctc
    54601 cacctcgatg gcactggcgt cggcgtgacg cagcgcattg cggatcgcct cgcgcccgat
    54661 caggaagacc tcttcagcgg cgtcggcctg aagcggtggc gctgccccct ccacggttag
    54721 gcgcagcggg ttggtgccct tgccggcgta ctcggcgtgc acatcggcca gcgccgacgc
    54781 aagatcgcga tcggcgaacg ggccatcacg caatgcgttg acccgctcgc ggccttcggc
    54841 caggttgcgc tcggccagct gcatcgccga ctccagctgg ctgcgcaccg gcgccggggt
    54901 ctgcgcggac tggctgatcg catgcaggcg caggatcagg ccctggctgc cctgcagcag
    54961 ggtgtcatgc aggtcgcggg cgatgcgttc gcgttcaccg tggcgctcct gcagacgagc
    55021 acggaacaat gccgccagct ggccactgcg gatgcgtacg gccatcacca gcagcgtcag
    55081 tatcgccgct gcgcacaaca gcttgaacca caccgtctgc atgaacgtag gcgcgatgcg
    55141 gaagctgcgg ctggccggca tggtgctcca gatgccgtct tcgttggcag cttccacctc
    55201 gaagcggtaa ttgcccggtt ccaggttggt gtagtacgca cgggtactgc tgccggcgtc
    55261 ctgccagccg tcgtcgacgc cggacaggcg atagcggtag cggttgcgct ccgggcgtgc
    55321 cagcgacagc gccacgtagt cgatctgcag ctggctggtg cccgcaggca ggcgcaggcc
    55381 gtcgtgcagg ggctggtgtg cgctgccgta cagcacctcg ccgatgcgca cgctgggcgc
    55441 catcatgttg acatgcgatc gcgtggtatc cagccaggcc aggccctggt tggtggccag
    55501 ccacagcagt ccgtcatcgg ccagcgcggc ggtggcgatc ggcccgctct gcagggcaat
    55561 gcctggcatg ccgtccaccg catcgaacag gcgtggcgtc acctgcatgc cggtgcgcag
    55621 ggcgccgcgc agctggctgc tctgcagccg taccaggccc cggctgccat tgagccacag
    55681 gtgcccgcgt gcgtcggcga ccatgccggt gatgccttcg agcacaccgg ccatgtcagt
    55741 gcggacgggc acgaatgggc catttcccac gcgcgcggca aggccggctt cgccggccac
    55801 cagcagcaga tcctgatgct gcagcagcgc ggtcaccggc cccacggcaa gcccctgggt
    55861 ggtatcgaag gtgtcgatgc ccgtgctgcg catgcggcgc agccggccgt cggcatagcc
    55921 gagcagcagc tggccctcgt ggtccagtgc aagcgttgaa caggccagct cgggcaagcg
    55981 cgtttcgcgc cgccattggc catgccggta atgcagtacg ccgtgttcgc cactgcagac
    56041 ccaggcctgt tcgtcgtcgg cgaacagcag ggcatgcagc ggttgcccgg tgaatggtgc
    56101 cggcagcgga atcagggtgg tgtggccggc caccgtgcgt gccaggttga cccagtcgaa
    56161 ctgccagacc ggtgtgggcg cctggcgtgc ggccgtctgc agctgcgcgg cgttgccgtc
    56221 cagcaacggc cggcgcagat cgtacagttt gaggtcttcg ccatagccat agacgcgtcc
    56281 atcgctggcc cgcaccagtg agcggtaggg gtcgctgggg ccggcggtga gcgtatgcac
    56341 gctgcgtgcg cggaagcggt tgaggccaag attggtgccg acccagaggt tgccctcgcg
    56401 atcgacgatg atcggcacgg ccgacgtggc ggtcagcccg tgcggtgaat cgaagcgttc
    56461 catgcgtacg gcatgatcgc cctggaaggt gacccgcgcc acaccgccat gtgggctcat
    56521 cgtggcccac aacgcaccat cggcggtgaa ctgcaggcgc gcggcgacca gatccggcaa
    56581 tcgccgtgct tcgcgctcat gctcggccat caggccctgc gcgttggcca gcggcgaggt
    56641 gccgcgcacg cggtcggcca gccacacttc gccctgcggg ctttcggcca gtgacgccat
    56701 ctgcgatacg gcgatgccgg tgtccctgaa cacggcatcg cctgatgcgc gcatccagac
    56761 cttcaggtcg gccaggaccc agaaggtgcc gcggctgtca tgcagcaccc attgcacgcg
    56821 atgctccggc acgccgctcc cgctcggcag cggttgccag cgctggccgt cgaaccagcg
    56881 caggccacca ttgatggctg cccacagccg gccgtcacgg gcctggctga agtgtggcac
    56941 cacgccgacc ggcaccccct ggccgcggcc gtagttgtgc agctggccgc gcgcgagctg
    57001 gctgatgccg gcctggaagt agccgatcca gagtgcgcca tcgctgccgt gcgccagcgt
    57061 gaccatgttg gaggagggaa aggcgctgcc gaccggtgcc ggctggcgtt caaagcggcg
    57121 gccatcgaag cggtagaggc ccgagccggt ggccagccac aacaggccat cgcggtcctg
    57181 gctgatgtcc cagatatcgc cgggcgcgcc ctggccaacc cgccaggcgg tgtgctcgta
    57241 gccgggcagg ccgctgctca acaaagggcg ctgcacggcg aacgcctgca gggagatcaa
    57301 cagcagcagg cacgccagca gcgctggcag gcggtgctgg aacgggaagg ggcggccacg
    57361 catggcgggc attctgtcag gtacggggca ggccagggtg acccgaacgg ggtaggcgca
    57421 tggcgcgccg ctcggctatc accccggcat gttccgtgga gcccggccat gcagcgcctg
    57481 ttcgtgatgt ttcccgaccg tgcaccgggc cttggcctgc tctggttgcg gctgtgggtg
    57541 gccgctgcgt tgtgcatgcc ggcggcgcac gccggtgagt ggtcgatacc cggcctggtg
    57601 gtggccgcga tgctggtgct gggcgcgctg accccgctgg cggcggtgct ggcaacgctg
    57661 ggcctgtacc tgctggccca gccctgggca cttgcgccac tgccgctggc gctgctgctg
    57721 cttgggccgg gcgcctattc gctggatgcc cggctgttcg gccgtcgcct gctggggcgg
    57781 cggcctcccc cattcgggta ggtgccggct tcgtccgacg ggggtagggc ttccggcgcg
    57841 tggcaccgac catgagccac ccctctgcgg cgtcccccat ggccaccgtc tccctgcctg
    57901 cttcgcccgc cgcatcgctg gccccgcacc agacggcggc gttgcagcgc gccctgcgct
    57961 atgtcgatga ccacctgtcg cagccgctgc gggtgaccga gctggcagag gctgcctgtg
    58021 tcagtcgctt ccatctggtg cgcctgttcc gtagcggcac gggcgccagc ccgctgcgct
    58081 acgtgcgccg ccgccgcatc cagcgcgcct gccagctgtt gccggacgcg aagcagccga
    58141 tgtcatccct ggcgcagcag ctgggcttct tcgaccagag ccatttcgtc cgcagcttcc
    58201 gcgctgagac cggctgcaac ccaggccagt acctggccgg cgatgcggcc ctgttgcttc
    58261 ccacagaaaa tgtttccaac ggagtccatc catgagcctt gccaccgctg ttgccgcccc
    58321 gtccctgctg tcgcccaccg atcacgcact ggtgctgatc gacttccagt cgcagatggc
    58381 atttgctacc cataccatcg acatctcggc gctgcgcaac aacgtgtcgc tgatcagcaa
    58441 gggcgccaaa ggattcaacg taccggtgct gctgaccacg gtggccgaaa cgtcgttctc
    58501 cggcccgatg ttcccggaac tgccggagat cttcccgggc cagccggtgt tcgaccggac
    58561 ctcgatgaat acctgggaag atcaggcggt gatcgcggag atcaatcgca tcggcaagcg
    58621 ccgcctggtg cttgccggcc tgtggaccag cgtctgcatc gtcggtccgg cgctgtcagc
    58681 gctggcgcag gggttcgagg tgtacgtgat caccgatgcc tgtggcgatg tcagcgaaga
    58741 ggcccacgag cgtgcgatca cccgcatggt gcaggccggc gcggtgccga tgaccagcgt
    58801 gcagtacctg cttgaactgc agcgcgactg ggcacgtggc gagacctacg agctgaccac
    58861 cggcatcgcc cgcgaccacg ccggcggcta tggcatcggc atccagtacg ccaagcgcat
    58921 gttcggcgcg caggaaggcg ggcactgagc atgctggccg gccatggcct cgacctggcc
    58981 ctgctgatgc tgcgcgtggc agccggaggc ttcctgctgc cgcacgcgct gggcaagctg
    59041 ttcggctggt tcggaggccc cgggctggcc ggttttgcca ctgaactgcg cggcttcggc
    59101 ctgccagcgg tggcaccgct gccgctgttg ctggccctgc tgcaggtgct gtccgggctg
    59161 gccgtgctgc tgggctggca gacccgcgtc gccgcgcttg cggcggctgc cttcatcggc
    59221 ttcaccgtac tgttggcctt gcccaggggc tggttctgga tgcgcggcgg tagcgagtac
    59281 ccgttgatgt ggaccacggt actgctggcc ctcgcgctgg ccgggcccgg cgcctgggca
    59341 ctggacggcc agcgccttcc aggagacctc gcatgagtca cgatccactc gaccacggcc
    59401 gccgcaacgt ggtgctgggc ggcagcgccg cgatggcgct gggcctggct ggccgcgccg
    59461 gagctgcatt cgattccact tccaaggagc gtcgcatgag cacgctggtc atccgcaatg
    59521 cccgcatcac caccctcgac ccgcagcagc cacacgcaca ggcgctggcc gtgcaggagg
    59581 ggcgcatcgt tgccgtcggc agtgacgagc agatcatgcg cgactggggc accgaagcga
    59641 ccctgatcga tgcgcagggc cggcgcctgt tgcccggcct caacgacagc cacacgcacc
    59701 tgatccgcgg cggcctgaac tacaacctgg aactgcgctg ggatggcctg cgttcgctgg
    59761 ccgatgcgat ggcgatgctg aaggcacagg ttgatcgcac cccggcgccg caatgggtac
    59821 gcgtggtcgg tggcttcact gccgcgcagt tcaacgaaaa gcgcctgccg accctgcagg
    59881 aactcaacga catcgcgccg gatacgccgg tattcctgct gcacctgtac gaccgcgcgc
    59941 tgctcaaccg cgctgcgctt cgggcctgtg gctacacgaa agacacgccg gacccgccgg
    60001 gcgggcagat cgtgcgcgac tcgctgggca acccgaccgg actgctgctg gccaagccca
    60061 acgcgctgat cctgtatgca acgctggcca aggggccccg gctgccgatc gagtaccagg
    60121 ccaattccac ccgccacttc atgcgtgagc tgaaccggct gggcatcacc tcggtgatcg
    60181 acgccggagg cggtttccag aattatccgg aggactacca ggtcatcgag cagctgcacc
    60241 gcgatgacca gctgacagtg cgcatcgcct acaacctgtt cacccagaac aagggcaagg
    60301 aagtggatga cttccgcggc tggagcgaga tcctgcagcc tcgccagggc gatgacctgc
    60361 tgcgccacaa cggggccggc gagatgctgg tgttctccgc tgccgacttc gagctgttca
    60421 acgagccacg cccggagttg ccggcggagc tggaaccgga actgcacgat gtggtgaagc
    60481 tgctggtcga gaagcgttgg ccgttccgca tccacgccac ctacgacgag agcatcaccc
    60541 gcatcctgga cgtgtacgag caggtcaacc gcgaggtgcc gttcgatggc ctgcactggt
    60601 tcatcgacca tgccgagacc atcactccgc gcaacatcga acgcatccgc gcgctcggcg
    60661 gcggcatcgc cgtgcagcac cgcatggcct accagggcga ggccttcgtc gagcgctacg
    60721 gtgtgcaggc ggcgcggcat acgccgccgg tgaagcggat gctggccgaa ggcgtgccgg
    60781 tgggtgccgg aaccgatgcc acccgtgtgg ccagctacaa cccgtgggtg gcgttgtcct
    60841 ggctggtgac cgggcgcacc gtgggcggcc tggccctgta cggcgatgag aacctgttgg
    60901 agcgcgaaca ggcgctgcgc ctgtggaccc agggcagcgc gtggttctcg ggcgacgaag
    60961 cggtgaaggg cacgcttaag gctggccagc tggccgactt catcctgctg tcggctgatt
    61021 tcttccgcgt cgatgacgcg cagatcgccg acatcaccag cgtgttgacc gtggtcggtg
    61081 gccgcatcgt gcacgccgac ggtgactacg ccggcctggc cccgcagctg ccgccggcga
    61141 tgcccaactg gtcgccagtg aacaggtttg gcggctacca cgtgggtgga gccgcgaccg
    61201 gcctggccgc tgcccaccgc catcaccacg gtgtggcctg cagtacgcat ggcgcccatg
    61261 gtcatgccgc ccggcacgtg gcgccgaccg atgacctgac cgcgttctgg ggcgcgatgg
    61321 gatgctcgtg cttcgcgttc tgagcctggc gctgctggcc atgccggcgc tggcgctggc
    61381 ctgcgacggt ggccactgca gcgatgcagg cgacggccaa ctgcaatggg atgcgtcgct
    61441 acgcgtgcgt ggcctgtact acgatccgac ccgcttcggc atcggaggcg cagaggatgg
    61501 ctacggcctg ctgcgtgcgc tggcctcggc cacctatgtg gaagacacct ggcaggcgaa
    61561 gctgcagctg ggtgtgcacg ccgagagtgg caaggccggc ggccccggcc gtaccgatcg
    61621 cagcgcgttg gacgtgcagc aggcgtactg gcgctggcag cacggtggct ttcatctgca
    61681 gctggggcgg caggaggccg gctacggcag ttcgcggctg ttgtcggtac gcgatgggcc
    61741 gaacatccgc ctggccttcg acggcgcacg tgcaggttgg aaaggccgcc tcggcatgct
    61801 ggacctgatg gtgctgcggc cggtggagaa tcgagccggt gccttcgatg atcggggcga
    61861 acacagtgcc cacctgtggg gagcgtacgc cacgacggcg cgcggtcagg cgacggggca
    61921 gtgggatctg tacctgctgg actaccgccg cgacggcgcg cgcttcgccg caggcagcgg
    61981 caccgaacgt cggcagacac tcggcgcgcg ctggttcggc caggccggtg cactggactg
    62041 gaacaacgaa ctggtggtgc agggcggtga actgcggacc gccacgggtg acctcgacat
    62101 ccgcgcctgg acgctggcca ccgatacggg ttggcgctgg ccggacctgc cgctgcagcc
    62161 acggctgggc ctgaaggccg acatcgccag cggcgacggc aatctgcgcg atggccggct
    62221 gggaacgttc aatgccttgt tcccaaagtc ggcctacttc agcgaggcca gcctgctggc
    62281 gccggccaac ctgatggata tccagcctac gctgagcctg cgcctgcacg acgcggtgac
    62341 gacggaactg ggcgtacaga tggcctggaa gcatcggcgc gcggatgcgg tctataccac
    62401 gcccgcgccg ctgctggcgt tgccgggcag cgccggtggc gcgcgccgca tcggtaatca
    62461 gtacaaatcc gaaacccgct ggcaggccag cgaacactgg caatggcagc tgcagctggc
    62521 ctgggtcgat gccgggcctg cattgaagca ggccggcggc caggacacgc tgttcgcctc
    62581 gatcgttgga gcatggcaat ggtgaacgca accgcgtcgc aaccccccgt accggccgca
    62641 ggcgcctggt ccccgttgaa gatccggatg ttccgttcga tctggctggc gatcctggcc
    62701 agcaacatcg gcacctgggt caatgatgtg gccgccgcct gggtgatggc cgagcgcacc
    62761 ggctcaccgt tgatggtggc gctggtgcag tcggcgacca cggtgccgat cgtgctgctg
    62821 gcactggccg ccggcacgct ggccgacatc gtcgaccggc gcaggtacct gctggccacc
    62881 cagggctgga tgctgctggt ggctgctgtg atggcggcgc tgaccgccat ggacatgctg
    62941 accccgcaac tgctggtgct gctgaccttc tgcatggggt gtggcgcggc gatggcgatg
    63001 ccggcgcagg ccgcgatcgt gtccgagctg gtgccgcagc cgatgctggc ttcggcggtg
    63061 gcgctgaact cgatcggcat caacattgcg cgttcgatcg gcccggccat cggcggcgtg
    63121 atcgtggccc agctcggtgc ggtctgggcc ttcggtttca acgccatcac cttcgccgcg
    63181 atgctgttcg tggtgtgggg ctggaagcgc gacccgaagc agtccagcct gccgccggaa
    63241 ggcttcggtg ccggcctgaa ggcaggcctg cgctatgcca gccgcgccgg gcggctgcag
    63301 gcagtgctga tcaagtcggt cggcttcttc ttcttcgccg cggc
//
LOCUS       DAOKIP010000004        62665 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.004,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000004 DAOKIP010000000
VERSION     DAOKIP010000004.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 62665)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 62665)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..62665
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.004"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            161..1150
                     /locus_tag="QEL58_000208"
     CDS             161..1150
                     /locus_tag="QEL58_000208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014091103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HDS1674734.1"
                     /translation="MKLGSLKEGGRDGTLIVVSRDLRHGVRATGIAATLQQALEDWSH
                     IAPRLNALYESLNAGDADGVFDLDPQALAAPMPRAYEFVDGSAYLPHVERVRRARGAE
                     VPESFYTDPLMYQATSAGFYGPRDAVKVVSEDYGIDLEAEIVVITDDVPMAATPEQAA
                     GHIQLVGLVNDVSLRNLIPGELAKGFGFLQSKPRSALSPVFVTPDELGAAWQDSKVHL
                     PLLTHINGTWFGAPEAGVDMQFNFAQLVAHAAKTRPLGAGTIVGSGTIANEDTSKGAS
                     CFAEQRVVETLRDGKPSTPFMSFGDVVRIEMLDAAGNSIFGAIEQRIEQAAKP"
     gene            1165..1833
                     /gene="maiA"
                     /locus_tag="QEL58_000209"
     CDS             1165..1833
                     /gene="maiA"
                     /locus_tag="QEL58_000209"
                     /EC_number="5.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="maleylacetoacetate isomerase"
                     /protein_id="HDS1674735.1"
                     /translation="MEIPVDDGIVLYTYWRSSAAYRVRIALELKGLAWDARPVHLVRE
                     GGEQHLDAYRALNPQQLVPTLLHDGHTLTQSLAIVEYLDERFPQVPLLPADAAGRARV
                     RALAQLVACDIHPINNLRVMQYLERNLQLPADARTQWTLHWIAEGLAAMEAMLASSRD
                     TGTFCHGDRPGLADLCLLPQLYNAHRFGLDLTPYPTLRRIEAACQALDAFDRARPENQ
                     PDAA"
     gene            complement(1882..3342)
                     /locus_tag="QEL58_000210"
     CDS             complement(1882..3342)
                     /locus_tag="QEL58_000210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005412157.1"
                     /note="This protein belongs to the uracil DNA glycosylase
                     superfamily, members of which act in excision repair of
                     DNA. However, it belongs more specifically to UdgX branch,
                     whose founding member was found to bind uracil in DNA
                     (where it does not belong), without cleaving it, appears
                     to promote DNA repair by a pathway involving RecA, rather
                     than base excision; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UdgX family uracil-DNA binding protein"
                     /protein_id="HDS1674736.1"
                     /translation="MHRRQPDAQRWSQRVDPAWSLQAWRDGARDALLRGVSPEQLDWL
                     EGSEASLLDAPLVQQAAAPAGATAPNVPREFLDLAATCLCHSEPQRLSLLYRLLWRIT
                     HGERAVLTNPADADVLRAMALAQAVRRDTHKMKAFVRFREVPGQPEAFIAWFEPQHHI
                     VDRVAPFFARRFTGMRWAILTPSRSVAWDGQALAFGPGARREDAPAEDAREALWQTYY
                     ASIFNPARLNTRMMMQEMPAKYWRHLPEAQLLPRLVRDAGDRVQEMHDRPAQAPQRRI
                     PMREEAAISATDTRSLQNLRQQASACRQCPLWENATQTVFGQGPADAGVMLVGEQPGD
                     TEDLRGQPFAGPAGQLLDRALAELGIDRAALYLTNAVKHFHHERRGRTRLHKRPESRH
                     IQACRPWLMGEIARVQPQVIVCLGATAAASVFGRDFNLSRDRGRWHALEDGTRGYATV
                     HPAWVLRQGDVVRREKAYRLFRDDLAQLLQKGDGGD"
     gene            complement(3323..4606)
                     /locus_tag="QEL58_000211"
     CDS             complement(3323..4606)
                     /locus_tag="QEL58_000211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012479051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative DNA modification/repair radical SAM
                     protein"
                     /protein_id="HDS1674737.1"
                     /translation="METIRKLAILADAAKYDASCASSGSGRRDSRASGGIGSTEGMGI
                     CHSYTPDGRCVSLLKILLTNFCIYDCAYCVNRVSSNVARARFSVDEVVTLTLDFYKRN
                     YIEGLFLSSGIIRNADYTMEQMVEVARRLRQEHRFAGYIHLKTIPEASPELLASAGRH
                     ADRLSINVELPTEAGLSALAPEKTVHSIRGAMGELRWRIEEAREARKAPAVLAPAVTR
                     SARPKQPRFAPAGQSTQMIVGADGASDQQILTSADSLYGNYRMRRVYYSAFSPIPDAS
                     RQLPLQPPPLQREHRLYQADWLLRFYGYGVDEITDTTQGGMLDLDIDPKMAWAIRHPE
                     RFPVDLNRAPKEMLLRVPGLGVRNTKRVLMARRHGRLRVADIARLKAPMSKLLPFVLL
                     ADHHPRKALDDPAALRAQLAPPPRQGSLFDAPPAA"
     gene            complement(4730..5857)
                     /locus_tag="QEL58_000212"
     CDS             complement(4730..5857)
                     /locus_tag="QEL58_000212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005914752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilT/PilU family type 4a pilus ATPase"
                     /protein_id="HDS1674738.1"
                     /translation="MDIGYFLKLMTEKNASDMFLTTGAPVYIKIEGKLYPLGNTGLPP
                     GMVKKIAYSLMDEGQVPQFERELELNMAIALPDAGRFRVNVFKQRGEVGMVIRAIRSR
                     IPSIEELNLPQVLKDVIMTPRGLVLVVGSTGSGKSTSLASMIDHRNSTTTGHILTIED
                     PIEYLHKHKMSIVNQREVGLDTHAFHNALKNAMREAPDVILIGEILDAETMEAAIAFA
                     ETGHLCLATLHSNNADQTIERILNFFPESAHKNVLMNLALNLRAVISQRLVKNKEGRR
                     LPATEVLINTPMIRDLLRRGQVHEIKAAMEGSLEEGMESFDQCLFRLAKAGVIDQEEA
                     LRAADSRDGLALKFRLSEGSTGEHDPYADFSAGAPSITHGF"
     gene            5979..6344
                     /locus_tag="QEL58_000213"
     CDS             5979..6344
                     /locus_tag="QEL58_000213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005415160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4398 domain-containing protein"
                     /protein_id="HDS1674739.1"
                     /translation="MRHGLYVMAFAFALSAPAWAQDAALELAQARQAVDKATQADADQ
                     YAPDLIGLARQGLEQAQRAAGDRRERKNAPAMALRAAADADLARVRSEEATVTAQLQL
                     RRNEVNQLQRQLSTGEDRR"
     gene            6341..7225
                     /locus_tag="QEL58_000214"
     CDS             6341..7225
                     /locus_tag="QEL58_000214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010480632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674740.1"
                     /translation="MKPMTAASLAALLALPTLAVAADNPMVAQLSQRLMAIQANPDTA
                     ELGAFERMQAQQAIATLDKAKRRDQELATYLAERRVEIAETAVRTAMAAREVDRLERT
                     RSDLLIEASRRDAARARQEAEQLRMQAQMQAEEAERLRQAAEAETLARQDAENALTSV
                     AGKQQQRLSAAQQNAAKLAREEAELVSGQKLPGSKFDGRGEVFTFNGDAFAAGASSLS
                     GGARNQAKALAEYLNIGKKGRLRIEAYDNANGVGQKRAEALRDALVAAGVASNRIQVS
                     GKKAASTRARSAEVIIAP"
     gene            7549..7785
                     /locus_tag="QEL58_000215"
     CDS             7549..7785
                     /locus_tag="QEL58_000215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005407964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcH family protein"
                     /protein_id="HDS1674741.1"
                     /translation="MFEDQPQSEIDARRARDPEFRALHDQHRKLNKKCMDAELGVLPI
                     DDVTLGRMKREKLLAKQRLLRMYETPLPMTSPTL"
     gene            8086..9456
                     /locus_tag="QEL58_000216"
     CDS             8086..9456
                     /locus_tag="QEL58_000216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017157251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal-phosphate dependent enzyme"
                     /protein_id="HDS1674742.1"
                     /translation="MPIHSSVLELIGQTPIVKAQRLDTGVCELYLKLESANPGGSIKD
                     RIGLSMIEAAEQRGDLKPGATLVEGTAGNTGLGLALVAQQKGYKLILVVPDKMSREKI
                     FNLKAMGAEVRLTRSDVAKGHPEYYQDLAKTIAEQTPGAYFINQFGNPDNPAAHEFGT
                     GPEILEQMGGDLDAIVFGCGSSGTMTGLSRAFAKLSPKTELVLADPVGSILAEYINEG
                     NLNDKSGSWLVEGIGEDFLPSISDFSRVTKAYAISDAESFHTARELLGKEGILGGSST
                     GTLLAAGLKYCREQSTPKKVLVLVPDTGNKYLSKMYNDYWMLDNGFLQRPQHGDLRDL
                     ILRPYGQRDTVVIGPNDLLTTAYQRMKLYDVSQLPVMDGDQLVGIVDESDVLLHVYGD
                     EARFRDTVATAMVSKLDRLDVKSPIEALLPVFDRGQVAIVMDGNSFLGLITRIDLLNY
                     LRRRVQ"
     gene            9590..10783
                     /locus_tag="QEL58_000217"
     CDS             9590..10783
                     /locus_tag="QEL58_000217"
                     /EC_number="2.5.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010480642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cystathionine gamma-synthase"
                     /protein_id="HDS1674743.1"
                     /translation="MSHSSSPDRALALATLAIHGGQSPDPSTGAVMPPIYATSTYAQS
                     SPGEHQGFEYSRTHNPTRFAYERCVASLEGGTRGFAFASGMAASSTVIELLDAGSHVV
                     AMDDIYGGSFRLFERVRRRTAGLDFSFVDLTDLDAFEASITSKTKMVWIETPTNPMLK
                     IVDIAAVVAIAKRHGLIVVVDNTFASPMLQRPLDLGADLVLHSATKYLNGHSDMVGGM
                     VVVGDNAELAEQMAFLQNSVGGVQGPFDSFLALRGLKTLPLRMKAHCANAMALAQWLE
                     KHPAVEKVIYPGLPSHPQHELAGKQMAGYGGIVSIVLKGGFEAAKRFCEKTELFTLAE
                     SLGGVESLVNHPAVMTHASIPVARREQLGISDALVRLSVGVEDLGDLQVDLENALDAA
                     ALRGA"
     gene            10785..12185
                     /locus_tag="QEL58_000218"
     CDS             10785..12185
                     /locus_tag="QEL58_000218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005407967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HDS1674744.1"
                     /translation="MSQPTYRIPAGYRLVQWVIRQQWLRAVYRHVPSRLRDKVAGHLL
                     ATSKEEHHHRFEGEARWAERRHAVPDAPVHFFGGMDPAWSRHGCNIFAYLRGQFGLAE
                     CARLYARALLGARYPAALVDVDINLPHGWNDHSLDEYIGNDAPHRVHLIFVNPDFLDA
                     AIEQIGRARLQGGYIIACWFWELEQVPDSWLPAINQVDEILVSSRYVGDAFARVTSKP
                     ILCVPLPLSEVGDSGLQRQDFGIAEKDFVFLTSFDFNSFVHRKNPFATVRAFQQAFPR
                     DRRGVQLIIKTSNGYRRPERLQLLLEAVKDDPRIVVRDHVLDRADVQALQRCADVYVS
                     LHHAEGFGLGLAECMAQGKPVIGTGWSGNMEFMDAGNSALVGYTLVPVLEGEYAHHEG
                     QRWAAADVEEAAHWMRRLADEPGLAQAMGERARQSVLQTLSPERAAAALINRIEQIHQ
                     QRGLTSAALPMQEVQD"
     gene            12185..12973
                     /locus_tag="QEL58_000219"
     CDS             12185..12973
                     /locus_tag="QEL58_000219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017354717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDS1674745.1"
                     /translation="MHSYSSTFKDLLDGIRGAKVPLYIAKGDITARYRRSVLGPFWQS
                     LATALGVVGLGLLWSQLLKIDKQTFIPTLTAGLIIWQMLSGILIESCGLFVRQASIIR
                     NVVMPLSVHPLSVVIRYLVNFAHSLLVFVIVAIVMKVDVGWNTLLFIPNLALVVVNLL
                     WLSFVFGVAGARYRDLEYGVASIMPMLFLVSPVMYRLEYLPFSSVILEFNPFTYLIEA
                     LRAPMLGHVASLQTYAVLAVMAIVGWLLAFWMLHKAKLRLPFWI"
     gene            12976..13734
                     /locus_tag="QEL58_000220"
     CDS             12976..13734
                     /locus_tag="QEL58_000220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017354716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDS1674746.1"
                     /translation="MTAKLNFENVTLRYPIYNSHSLSLRRNLVGIATGGKLMAASGQV
                     TQVTALDNISFSLKQGDAVGIVGHNGAGKSTLLRAMAGIYTPLEGRVERVGRIATMLE
                     VGAGMDPELSGYENIRRMGMMLGLSLKEVNERIPEIEEFTDLGDFLQLAVRTYSAGMA
                     MRLMFAVATCTTPDILLVDEVFDVGDEAFKDRAAKRMHDFIKSSQIFCLASHSMDTIA
                     KYCNRAFVLNHGTLREIPISQLTSEGYGIENQAG"
     gene            13715..16246
                     /locus_tag="QEL58_000221"
     CDS             13715..16246
                     /locus_tag="QEL58_000221"
                     /inference="COORDINATES: protein motif:HMM:NF016908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FkbM family methyltransferase"
                     /protein_id="HDS1674747.1"
                     /translation="MKIKLGNAVSSAADKAAQSRASDGFLAPGEELVLSSSSYASMDA
                     ITMRGFALPESDGIWSSGAINTIDVRLRGVDASRRYRVMINAIAFEGSGHRALVSMRV
                     NDGPAHQVLANSVGWSSIVADWEVQVVGKIPMVRIEFQVANPMSPTAIGLGDDNRLLG
                     FKVRSLQLLDLGPASTAVAATPVVVETVEVADVPQDANAGVVGVFAQSPTETIRALAK
                     RGPILRMLLLDKNPVVRVVRWMRRVSRNMEEMRRQLDLIRIDSARQTRELGERVDNIE
                     IDARVQERERRRAGSNVDAIIEQLELNHARLLAIEESAQEVGRMHEQRRDEHADSLES
                     ILATTDGLGRDVAAVLDTLNTTLSESMRMLREFESVDNKLAGMDRALRLVQIQGEEHA
                     RHAISGIRELREQLHLSLQQQQVRSEEAQAGIESSLQGMIERQWSESDELRQHMQSTL
                     QLLEKRHQVEREELKQQVQEILSEGARSLDVRNNVDAEVLRHHVLRLHERLDHLSVVK
                     PGAGGSIVVADRAVSEQALQLIALLHQKLDNSALETGQVLELLVAIRDRVEAQRLTLS
                     SAAGRWAGAAQRRVLRRHDGWLINVEFGTFSCSESDDLLAMYLLESGDVERGLRLFLQ
                     HALKPGDVFLDAGANIGLHTVAAAHVVGPSGRVYAAEAMPRTLQHLRASLRLSAVEDR
                     VEVLPVALGSCDEDGREFHIGAVAGHSSLYPIDTEVEVLRVDVRTVDGLLGGTRVALA
                     KIDVEGAELEVLAGMRGLLAANPDMGVIAEYAVSHLARVGTSEAEWEAFRAEHAFDLY
                     RIDDLTGACVPLAGFSALREHASSNVLLCQPGSLLPGAVAAGGAE"
     gene            16243..16875
                     /locus_tag="QEL58_000222"
     CDS             16243..16875
                     /locus_tag="QEL58_000222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017354714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyltransferase"
                     /protein_id="HDS1674748.1"
                     /translation="MSRVAVVGAGGHAKVIIDLLRGGGHEVVACLDAGRVGQVVNGVP
                     VLGDERVQLPLLKDQGVDAVFVALGDNRLRRKVAAAVTAAGLEMIPAVGRSAVISPSA
                     RIGQGCAIMEGAILNADVVVHDFAIINTNASVDHDCVVGAFAHIAPGSTLAGGVEVGA
                     SVFLGAGTRVIPGIKIADGATVGAGGVVVRDIDSTGTWVGVPARQIKIKD"
     gene            16879..18003
                     /locus_tag="QEL58_000223"
     CDS             16879..18003
                     /locus_tag="QEL58_000223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014091094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegT/DnrJ/EryC1/StrS family aminotransferase"
                     /protein_id="HDS1674749.1"
                     /translation="MLASKRIPVAVPSLSGNEKKYVGQCLDSTWISSAGEFIGRFEQS
                     FADFCGVRHAVAINNGTTAIHLALVALGIGEGDEVLIPTLTYIATANAVAYCNAKPIL
                     VDSEPGTMNMDPAKLEALITPRTKAIVVVHLYGHPTNMGPVMDIARRHNLKVVEDAAE
                     AHGAEYLGTRVGGIGDCATFSFFGNKIITTGEGGMVTTNDDGLAARLRLYRGQGMDPK
                     RRYWFPVVGFNYRMTNVAAAIGVAQMERIDEALQVRQRVAGWYEAAFAQHVDLVERPA
                     VAEYAHHVYWMYTVLLTGLSEQQRDEVMRLMDADGIETRPVFYPMHVLPPYLEDGAAY
                     PVANDQAARGINLPTHADRTEEDVERVVEALVSAIGRVSA"
     gene            18006..19043
                     /locus_tag="QEL58_000224"
     CDS             18006..19043
                     /locus_tag="QEL58_000224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017354712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HDS1674750.1"
                     /translation="MRIAICSSFVPFVNGGARFIVDWLGSRLREHGHQVEIIYLPMVE
                     SPTELLQQMAAYRMMDLSDSVDRVITTRPPAHLIQHPKKVAWFIHHFRLYYDMWDTPY
                     REFPDDARHRALRGALVRADTTALAESHRLFTNSQVVADRVKRYNGLDAEVLYPPLLD
                     VSHFRDAGQGDEIVYVCRMERHKRQHLLLEAFKYVTTPVKLRLCGTSSGPGYTNGLRA
                     FIVAEGLQNRVTCVDRWITEEEKAQWLSTALAAAYLPEDEDSYGYPSLEAAQSSKPII
                     TTTDSGGVLEFVEHGRNGMIAEPDPRALAEVIDALWMDREHTRRMGQAAKVRVQELKI
                     NWDHVLERLLS"
     gene            19040..20077
                     /locus_tag="QEL58_000225"
     CDS             19040..20077
                     /locus_tag="QEL58_000225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017354711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HDS1674751.1"
                     /translation="MKVLVVNNMVPGMRGGAEELADQLVVNLRQAGHQSELLRIPFTW
                     HPPERIIGEMLMCRSMRLVNVDRVIAMKFPAYLLPFKNKVFWLAHQYRQAYDMWDSGH
                     SNIPDTPEGRQIRAAITEADNDAFSMAQSVYAVGRTVQDRLMNYNGIPSELMRAPLND
                     PELFTGGKYGDYIFAGGRINAGKRQHRLVEALAQTRSPVKLIIAGPADTPEDERRLRA
                     LVESHGLQGRVKLDIGFHPRQVIADYVNGALACAYLPMAEDSFGYVTMEACQSRKAVI
                     TVDDSGDLTELVKHGANGWVCADDTGEIAAAMTEAFASRAQTRERGDNAYDSWTRLDI
                     NWASTVEKLTR"
     gene            20074..21369
                     /locus_tag="QEL58_000226"
     CDS             20074..21369
                     /locus_tag="QEL58_000226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017354710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HDS1674752.1"
                     /translation="MKIVWAGPYCGQSAIARFSLQVVNALRELGHEVAIYRTETGEAA
                     SYPALPDTTVLPSGSAMEDEWLRTADLVFANVGDHYGFHGGIFELARKRQFIGIMHDW
                     FVLNLFWGMLRVEGRQQDAPRIIQGLYGQEAGELCAAATSETIMQVAATHFPMTEWAV
                     ADMLGCIIHSEFYRAKVQARCPGPVHKLSLAYPAPDVRQDLRSAVDDHSRLRLCTLGV
                     VNPNKCVDKVVRALMRDPGLAARTEYRVLGGVSEQERKRLEGICAEVGFRGLVLEGRV
                     SDERLLEGMAEADAICCLRDPALEGASASAIEGMQSGVPVIVSDAGFYADLPDDYVLK
                     VPQGDCEDELLARLQLVDRERSAGRDMGARARAWARDEFSAIHYAKGLDALIPEFIES
                     EPYIAAARALGRELGRMGIPGSSPSAGRLAGMLDRMFSL"
     gene            21413..22447
                     /gene="gmd"
                     /locus_tag="QEL58_000227"
     CDS             21413..22447
                     /gene="gmd"
                     /locus_tag="QEL58_000227"
                     /EC_number="4.2.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019042067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-mannose 4,6-dehydratase"
                     /protein_id="HDS1674753.1"
                     /translation="MKSAVITGISGQDGAYLAQLLLEKGYKVYGTYRRTSSVNFWRIE
                     ELGIDKHPNLHLVEHDLQDIGSSIRLLKDSEATEVYNLAAQSFVGVSFDQPVLTAQIT
                     ALGALNLLEAIRAVNPEIRFYQASTSEMFGLVQQVPQTEQTQFYPRSPYGVAKLYAHW
                     ITVNYRESYGIFGASGILFNHESPLRGREFVTRKITDSVAKIKLGKLDVLELGNLDAK
                     RDWGFAKEYVEGMWRMLQVDVPDTYVLATNRTETVRDFVSMAFKAIGVDLAWNGSGLD
                     ETGTCKATGKVLVKINPKFHRPAEVDLLIGNPEKAKRELGWEPSTTLEELCEMMVNAD
                     LRRNEAGASF"
     gene            22552..23436
                     /locus_tag="QEL58_000228"
     CDS             22552..23436
                     /locus_tag="QEL58_000228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014091089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HDS1674754.1"
                     /translation="MKPIAAITGIEGFTGPYMAAELERLGYQVKGISRNPVPGRDNEV
                     ADILDPDAIGAVMKRLQPQVIVHLAGVSHVAHRDVSAIYQANIMGTRNLLEALTELEA
                     VPKSVLLPSSAHVYGASSSSLLEETSPMAPFNDYAISKVAGEHVARLYMDRLPIMLTR
                     PFNYTGVGQSPSFFVAKVIDHARRGSTDMRLGNLDVERDFTDVRDLVRCYGMLIEQGC
                     RGQVVNICSGVPTSLRRVIETVSEISGLEFAIESDSELIRSHDVDRLAGSNAGFTALT
                     GGIAFRPLRETLQWMLDA"
     gene            complement(23545..24129)
                     /locus_tag="QEL58_000229"
     CDS             complement(23545..24129)
                     /locus_tag="QEL58_000229"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674755.1"
                     /translation="MTTNISKIALPLILASSLMLTACSNDSQAPAAAEGAAPAAVKEN
                     PQLTHEQVSSNIEQVGSTAYNAADDTLTVKLKISNKGTAAWPTSGTNPVTVGVVQLLD
                     PAPGTAEPARGEEARVPMTGDVQPHAETEVTAVVPGDFAAGHKVRIELLQEGVAWFGY
                     NFQQPVLVLGPFARCADGKGLCDDKGAPIAAATP"
     gene            24597..27008
                     /locus_tag="QEL58_000230"
     CDS             24597..27008
                     /locus_tag="QEL58_000230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674756.1"
                     /translation="MSLASVLAIALICLRRFDVPLLLLLATLLTAAMLAVFRVRIRWS
                     LPKLGIGFVAIAALALFLRSDLDPHLKAGQDQGLYTNMSAQLLRAKALDYTDEFRASL
                     SGEELRMYDSAPMAAVDLVDPVRSRYVVAFYPLHPAWMAMSTWAFGQNYHTASLLLFA
                     ALGIAGGYYLALLLFGSRRAAGLAAAFLALNPALVFFAKFPVTEMVAFAFTVNGFLFF
                     AKACFEVARGKRWLFLLIAVLCFNGLFYTRMQFFLYIPFMGLLFAYALIAIRQPWSRR
                     VVMMVFPASLVITFLVSMAFYRYYQPILYGGMVEGHLDKLKKLAALMAAGLGLVVLGL
                     LAYVVARRPTLAVLERLNDQILRWSGKVTWLLPLALLASIPSVVALYQTGSLAPFPWT
                     VPVGTDPFLVRYHAIYRLAQMLSPLGVALLLLLPAFRIAWSGAAKFGLLFLVLVWAAV
                     LTQPAIPYLYYYGRYLAGDMLPYSLILTAGVIAYLWDGRWRRLAIAITAFQCLFFLVF
                     SIAQYNHDEGEDPRFFERIAELVSPNDIIIASGLDDAQLVGLRVTYNLNVFSITGRGS
                     VPLPFDTGTWHRLEANAHQKGGRLYLLTNQRPSALQEQLVERVPFRQGYMSNSEHAQA
                     GNMFQPTSRSRLLLPLRFKQAEVEINLYRIDTSTFDRVANASCTDELGLATDGAILVK
                     GLNGFSSPETHGRWTDGKRASYTCTLPEGHSASTVEIQATAYLPNGRKQRVGVSVNGG
                     APQQFEFAPGNDTQRLQIPVGNTDKRSLTVDFDLPDAISPQQAQSANDARVLGISISE
                     IEIKE"
     gene            27005..28309
                     /locus_tag="QEL58_000231"
     CDS             27005..28309
                     /locus_tag="QEL58_000231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003113429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide sugar dehydrogenase"
                     /protein_id="HDS1674757.1"
                     /translation="MNKQLIERLDSKTATIGIVGLGYVGLPLLLRYSEVGYKVVGFDI
                     DPSKIEMLSSGRSYIEHIDSADIAKAFASGAEATTDYARAKDVDALIICVPTPLTKFR
                     EPDLSFVVGTVDALLPHLRAGQIMSLESTTYPGTTDEELKPRVESQGFTIGEDYFLVF
                     SPEREDPGNPNFSTRSIPKVCGGVTAPCLDVGLALYGQVIDRVVPVSSARAAEMTKLL
                     ENIHRAVNIGLVNEMKVAADRMGIDIHEVIRAAATKPFGFVAYYPGPGLGGHCIPIDP
                     FYLTWKAREYGVHTRFIELAGEINSSMPDYVISKTLLALNLRRKAINGSRVLVLGIAY
                     KKNVDDMRESPSVVLMEKLRDLGAEVSYSDPHIPVFPKMREHQFELSSVDITADTLSS
                     YDCVLLATDHDKFDYALIKQHASVLVDSRGRFLESADNIVKA"
     gene            28313..29374
                     /locus_tag="QEL58_000232"
     CDS             28313..29374
                     /locus_tag="QEL58_000232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003807115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HDS1674758.1"
                     /translation="MRVFTPPVLDRKIRFALVGCGRIAQSHINAMRQHADRIELTDVC
                     DVDPAALQKAVEDTGAVGHRKLSDMLASTTADIVVLTTPSGLHPEQAVEIAAAGKHVM
                     TEKPMATRLQDGVRMVKACDEAGVRLFVVKQNRRNATLQLLKRAMEKRRFGRLYMINI
                     NVFWTRPQSYYDSASWRGTWEFDGGAFMNQASHYVDLLEWLGGPLESVQAYTATLARN
                     IEVEDSGVIGLRWRSGALGSVNVTMLTYPQNLEGSITIIGEKGTVRIGGVAVNEIQQW
                     QFAESDPDDEAVASASYETTSVYGFGHPLYYDNVIQVLRGEAEPETDGREGLKSLEVL
                     IAAYMSARDGKRVALPLEY"
     gene            29376..29945
                     /locus_tag="QEL58_000233"
     CDS             29376..29945
                     /locus_tag="QEL58_000233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003113426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HDS1674759.1"
                     /translation="MALFIHPTAIVDEGARIGDGSRVWHWAHVSAGAQIGNDCSFGQN
                     VYVGNDVVIGNNVKIQNNVSVYDAVRLEDDVFCGPSMVFTNVYNPRSAVNRKAEYRQT
                     LVRRGATLGANCTIVCGVTVGEHAFVGAGAVVNRDVAPFALMVGVPARRAGWMCLCGE
                     RLPGTGTVTCAHCDRRYLVDDASCALLDA"
     gene            29997..31100
                     /locus_tag="QEL58_000234"
     CDS             29997..31100
                     /locus_tag="QEL58_000234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010929614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegT/DnrJ/EryC1/StrS family aminotransferase"
                     /protein_id="HDS1674760.1"
                     /translation="MQFIDLAAQYRALKQDVDARIAKVLEHGRYIMGPEVREMEQALE
                     ARTGAPHCISVASGTEALLIALMAIGVSAGDEVITTSFTFVATAEVIALLGAVPVFVD
                     VEPDTCNIDANLIEAAITPRTKAIIPVSLYGQVADMDAINAIAARHPGITVIEDAAQS
                     FGATYRGKASCNVSRIACTSFFPSKPLGCYGDGGAIFTDDAALAKAMAEIRVHGQERR
                     YYHTRVGVGGRMDTLQCAIVLAKLGRFDFECERRQHVAGRYLQALAGLQGCELPSLRE
                     GNSSVWGQFTVQVDDRAKVVERLTAANVPTAVHYPVPLHQQPAYRDRCRIASSLANSE
                     RVAQRVMSLPMSADLDETQQDYIIEQLRAALRD"
     gene            31138..32145
                     /locus_tag="QEL58_000235"
     CDS             31138..32145
                     /locus_tag="QEL58_000235"
                     /inference="COORDINATES: protein motif:HMM:NF012745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HDS1674761.1"
                     /translation="MYQNNRISVVVPAHNEETQIKRVIDTMPDYVDYIVIVNDTSTDR
                     TSDVVRATPEYASGRVVLIEHEVNQGVGGAIATGYKWSRDNGIDVSVVMAGDGQMNPL
                     DMPAILAPVINDVADYSKGNRLVTGEAFKRIPKIRFFGNSALSLLTKIASGYWGVADS
                     QTGYTAINAKALAAIDWDHMYKRYGQPNDLLVRLNIAEMRVVDVPVEPVYNVGEKSGI
                     RVRKVLFSIGWLIVRLFFYRLKEKYIIRDFHPLVFFYAFGGATALVGLLFLVRTILLW
                     FTQGSMPEMSFLVTLFSFSISFNAIGFAFWFDYQANRHLNPPITHRDVTHRQAPDPID
                     P"
     gene            32142..33440
                     /locus_tag="QEL58_000236"
     CDS             32142..33440
                     /locus_tag="QEL58_000236"
                     /inference="COORDINATES: protein
                     motif:HMM:NF014051.1,HMM:NF026018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligosaccharide flippase family protein"
                     /protein_id="HDS1674762.1"
                     /translation="MSISPSALLKTLASNLSWTAASLVILAVSGIAINLMIAGFRSAS
                     DLGVFNQAYAVYVVASQLTVFGIHNSIMRNAAHYSGDAEEGRSLAGSGLLLSALAGVV
                     GAALLVLAAPALGKWFDSPDTALGVRNVAYGLLLFPLSKTLLGLLNGLQLMKAFAVLQ
                     SLRYLVVMAWVAVVSMTSASIDKVLYCFLVAEVVTTVAALGYLWSRRMLQGMRVRRVW
                     IGRHASFGARSLLSNTFVELNSRVDVILIGFFLTDRAAGIYSFGAILIDGLYQVWHLI
                     RVNLNPILVNASRDRDWSTCRMLLNKALRYLYPLAVLLALGVVFAYWFTITYVMSGKG
                     LEEGMLPLIILLLGLTSVAPFIPFDQLPLLGGSPGLQTLQQLSVVIVNAILNVIFIPW
                     LGIEGAALGTALSYVFGVLVLMLMVRRLYSWNLITNRIEA"
     gene            33443..35473
                     /locus_tag="QEL58_000237"
     CDS             33443..35473
                     /locus_tag="QEL58_000237"
                     /inference="COORDINATES: protein motif:HMM:NF024912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674763.1"
                     /translation="MCGIFGLVLRKDAAFSHSRLQSTLSELFKLSETRGKESSGIHAY
                     VPDQRASWGLKSADRATDLMKSPEYASIMQALAAAFEAEKVGASLAVIAHSRLVTNGT
                     SALPQNNQPVSREGVTLIHNGIVVNVDELWASHPELQRHAEVDTEFMGAFLAQHGGAS
                     TPAKATADVFALLKGAASIAWVHGQTDRLVLATNTGDLYFHLDERQGVLVFASEQYIL
                     DNVVKHIHGEAAVPAVRWLEPQTALGVGINNLGTAAFRLDEATAAAADAGVQVYPTPV
                     SAHQAAPARPATPVLAVGSADFSLLRYNEDNLKKLRRCSRCILPETFPFIAFDGEGVC
                     NYCRSYKPRYAGMHPVKTKHDFIESLAGYRRGNGRPDVLVPFSGGRDSSYGLHLIKHE
                     FGLNPITFTYDWGMVTDLARRNVARMCGQLGVQNILVSADIKQKRENVRKNVAAWLKK
                     PDLGMVPLFMAGDKHFFRIVNQLKRQTGISLDLWSANPLENTDFKSGFCGVSPDFDKS
                     RVDYLSMSRKLHLAAYYGSRFLTNPGYINTSLLDTMGAFLAYYVEPRRDFYFIFDHMI
                     WEENEVNDVLLNQYDWELAPDTDSTWRIGDGTAPFYNYIYMTARGFSEFDTFRSNQIR
                     EGMMTREEAISAVYTENRPRPQSIKWYLDTIGIDFDSAIRRINEMDVMGLHR"
     gene            complement(35510..36031)
                     /locus_tag="QEL58_000238"
     CDS             complement(35510..36031)
                     /locus_tag="QEL58_000238"
                     /inference="COORDINATES: protein motif:HMM:NF012360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HDS1674764.1"
                     /translation="MLKEYLRRFVQHLLGSFLFDAPGLVQCKMFVLRRFFDIGANSYV
                     SYRAMLVSPHSTRHAHFSMGRNVGVEHDCELDYSGGLKIGNDVWISEGVFIATHGHRI
                     KTRALKKEQPVDFTGLTIGDDAWLGARAVILPSVNRIGTGAVIGACCVVTKDVEDWAV
                     VVGNPARVIGYRN"
     gene            complement(36096..37502)
                     /locus_tag="QEL58_000239"
     CDS             complement(36096..37502)
                     /locus_tag="QEL58_000239"
                     /EC_number="2.7.7.13"
                     /EC_number="5.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016850199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannose-1-phosphate
                     guanylyltransferase/mannose-6-phosphate isomerase"
                     /protein_id="HDS1674765.1"
                     /translation="MLPIVPVILSGGSGTRLWPLSREAYPKQFLPLVGDDTMLQATWK
                     RVAAIAGKAPIVVANQEHRFMAAEQLRECNVQPQALILEPVGRNTAPAIAIAALQVLA
                     GNDDALLLVLPSDHVVRNEKAFHAAVAQAAVAADAGKLVTFGIVPTAPETGYGYIKAA
                     AGEGARGVERFVEKPDLATAEGYVASGEYFWNSGMFLFKASRYLQELEKLQPAILAAC
                     REALAKAARDSDFVRLDADAFAASPSDSIDYAVMEKTGDAAVVALDAGWNDVGSWSAL
                     WDVSDKDADGNACHGDVIALDCRNSYAYGNRLIAMVGLEDVVVVETDDAVFVGHKDRV
                     QDVKAIVGQIKRDGRSEAAAHRKVYRPWGAYDSIDNGARFQVKRITVKPGATLSLQMH
                     HHRAEHWIVVSGTAEVTRGDDVILLTENQSTYIPLGVTHRLKNPGKLPLELIEVQSGS
                     YLGEDDIVRFEDQYGRAN"
     gene            complement(37518..38879)
                     /locus_tag="QEL58_000240"
     CDS             complement(37518..38879)
                     /locus_tag="QEL58_000240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007809321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomannomutase"
                     /protein_id="HDS1674766.1"
                     /translation="MMTLPCFKAYDIRGRVPDELDANLAKRIGAGTAALLGPGPVIVG
                     HDIRLSSPELLQAAIEGLTASGRDVIDIGLCGTEEVYFQTFHRQAAGGIMVTASHNPM
                     DYNGMKLVREQSKPISGDTGLFDIRDFAASDAPLGNGHGTVSQDADKSAYIQHLLGYI
                     DVASLKPLKIVTNAGNGGAGLVIDALAPHLPFEFIRIQHEADGSFPNGIPNPLLPENR
                     AATRDAVREHGADFGIAWDGDFDRCFFFDADGNFIEGYYLVGLLATALLARQPGGKII
                     HDPRLTWNTIEQVQQAGGVPIMSKTGHAFIKERMRAEDAIYGGEMSAHHYFRDFAYCD
                     SGMIPWLLIAALVSQTGTPLGELVADRVKAFPCSGEINFRVEDAKATVAHVLAHYQAD
                     APLLDHTDGVSAEFADWRFNLRSSNTEPLLRLNIETRGDAVLLARRTQELTALIGGSP
                     AHH"
     gene            complement(39022..39963)
                     /locus_tag="QEL58_000241"
     CDS             complement(39022..39963)
                     /locus_tag="QEL58_000241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010480667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit
                     alpha/FixB family protein"
                     /protein_id="HDS1674767.1"
                     /translation="MSKILVIAEHHDGKLNAATAKTVSAAAAIGGASIDVLVLAADPA
                     AVAAEAAKIAGVAKVLTVANAANAQAIAQVLAPQIAQLAKGYTHVFGPSTTFGKDLMP
                     CVAALLGVNQVSDLMSVEGSHTFKRPIYAGNAIITVEAPADQVVVATVRAASWPEAAQ
                     GGSAAIEAASVDAPLPAHTRFVGLAAGASDRPDLQSAKRVVSGGRGVGSEENFKVIFQ
                     LADRLGAAVGASRAAVDAGYVPSDLQVGQTGKIIAPELYVAVGISGAIQHLTGIKDAG
                     TIVAINKDGDAPIFEIADIGLVGDLFTILPELEAALG"
     gene            complement(39963..40709)
                     /locus_tag="QEL58_000242"
     CDS             complement(39963..40709)
                     /locus_tag="QEL58_000242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019182580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit beta/FixA
                     family protein"
                     /protein_id="HDS1674768.1"
                     /translation="MKILVAYKRVVDYNVRIQVKPDGSGVVTDGVKLSPNPFDEIALE
                     EALRLRDKGIASEVVVATIAPADAQAHLRNGLAMGANRAIHVVTDQAIQPLTAARTLL
                     KLIEKEQPDLVILGKQAIDDDANQTGQMLATLWGRPQATFASKLEIADGKATVTREVD
                     AGLETLEVDLPAVVTTDLRLNEPRFIKLPDIMKAKAKPLETLQLADLGVEAADTFKTT
                     HYAAPSKRSKGVMVKDAAELVAALKQKGLL"
     gene            40991..42046
                     /gene="rfbB"
                     /locus_tag="QEL58_000243"
     CDS             40991..42046
                     /gene="rfbB"
                     /locus_tag="QEL58_000243"
                     /EC_number="4.2.1.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011407612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-glucose 4,6-dehydratase"
                     /protein_id="HDS1674769.1"
                     /translation="MPTWLVTGGAGFIGGNFVLEAVARGIKVINLDALTYAGNLKTLS
                     SLDSDANHVFVQGDIGDRDLVARLLAEHRPDAVLNFAAESHVDRSIDGPGAFIQTNVV
                     GTLGLLEAVRDYWKGLPADEAAAFRFLHVSTDEVYGTLGETGKFSETTPYAPNSPYSA
                     SKAASDHLVRAFHHTYGLPVLTTNCSNNYGPYHFPEKLIPLVIAKALAGEPLPVYGDG
                     RQVRDWLFVTDHCEAIRTVLAKGQVGETYNVGGNSEKQNIEVVQAICALLDARRPRDD
                     GQPRSSQITYVADRPGHDRRYAIDASKLKNDLGWEPAYTFEQGITFTVDWYLDNQEWV
                     NGVLDGSYRLQRIGTSA"
     gene            42074..42961
                     /gene="rfbA"
                     /locus_tag="QEL58_000244"
     CDS             42074..42961
                     /gene="rfbA"
                     /locus_tag="QEL58_000244"
                     /EC_number="2.7.7.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016903936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate thymidylyltransferase RfbA"
                     /protein_id="HDS1674770.1"
                     /translation="MTQRKGIILAGGSGTRLYPITKGVSKQLLPVYDKPMIYYPLSVL
                     MLAGIREVLIINTPHEQALFQQLLGDGSQWGMDIQYAVQPSPDGLAQAYLIGRDFVAG
                     KPSCLVLGDNIFHGHGLRELLKRADERVDGSTVFGYWVNDPERYGVAEFDRGGKVVDL
                     VEKPANPRSNYAVTGLYFYDGNASDYAAELRPSSRGELEITDLNKRYLADGTLHLEAL
                     GRGYAWLDTGTHQSLLEASNFIETIQTRQGLQVCCPEEVAFGQGWISAEQLQALAAPL
                     IKNGYGQYLNKLALRGVVP"
     gene            42958..43515
                     /gene="rfbC"
                     /locus_tag="QEL58_000245"
     CDS             42958..43515
                     /gene="rfbC"
                     /locus_tag="QEL58_000245"
                     /EC_number="5.1.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010377788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose 3,5-epimerase"
                     /protein_id="HDS1674771.1"
                     /translation="MKVIQTRLPGCVVLEPMVFGDSRGFFFEGWNASRFGALGLPDRF
                     VQSNVSSSSKGVLRGLHYQWPRPQGKLVSVLEGEVYDVAVDIRRGSPTFGCWEAVLLS
                     AGNKRQFWIPEGFAHGFAVLSETALFHYLCTDVYVKEADAAVRWDDADIAVDWPISDP
                     ILSAKDEDAPFLKDIAEDRLPAYTP"
     gene            43512..44417
                     /gene="rfbD"
                     /locus_tag="QEL58_000246"
     CDS             43512..44417
                     /gene="rfbD"
                     /locus_tag="QEL58_000246"
                     /EC_number="1.1.1.133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017158252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose reductase"
                     /protein_id="HDS1674772.1"
                     /translation="MKLLVFGGNGQVGQELLRALAPLGTVIATTRSGTLPDGRSCERA
                     DFSEPGSLLALLDRLQPSIVVNAAAYTAVDRAEQDAGAAFAANALAPGVIARWCALRG
                     VPFVHYSTDYVFDGRGTRPYREDEPTAPLGVYGTSKRDGEDAVRAAGGRHLIFRTAWV
                     YAAHGANFLRTMLRVGAERDRLRVVADQIGTPTPAALIADVTALALQHPGPLSGTWHL
                     TATGQTSWHGFAEAIFAEALAKGLLDRAPVVEAIPSSDYPTPAQRPAWSVLDNRRIQQ
                     DFAIELPSWQAGLARVIDEIALPRN"
     gene            44577..45905
                     /locus_tag="QEL58_000247"
     CDS             44577..45905
                     /locus_tag="QEL58_000247"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674773.1"
                     /translation="MPPFAVAAGVALVALLVRLLYVQFFSTPMPFWDQWDGEGATALQ
                     PWLHGTLQWSTLLEPHNEHRIFPTRLVALLSFFLTGQWNNVYEARISAVVACFIPATL
                     VWHALRDSDVVGGRRLLVAFALLMSILPFSWENLLVGFQSQFYFLVLSSIVAVGLVAR
                     HHQSIPALLAAMALSVLAAVTMASGMLTAVAVGATCVIACLCLPGKRAPALCATAVLA
                     VLAVIAYRAIPVIDANGMLRAQSLGELFLATTRVLSWPGRSNGWVAIVWLPGVVMITR
                     MLLRRQATRTDVAMAGFCAWTVLQALAIAYGRGHEMGSPAPRYTDLFVPGVFGNAWFA
                     LQLWGLLPRSGLRSAARAAVVMFALVVVGAPLSQVGKDFRRIRAFAAESRVQQDNATR
                     YLVTGDPAALQVGERELPYPDAAKLKAQLDDPRLRRILPVKLEASASEGR"
     gene            complement(45966..46358)
                     /locus_tag="QEL58_000248"
     CDS             complement(45966..46358)
                     /locus_tag="QEL58_000248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008267081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GtrA family protein"
                     /protein_id="HDS1674774.1"
                     /translation="MTLSRPFLLFLVAGGIAALANILSRMLYSHWMPFTPAIIAAYLT
                     GMVTAFVLTRWFVFSGSTRPLHHSAFYFVLVNLFAVAQTWLVSTVLAYHLLPWLGVDM
                     LRLEIAHVVGVAVPVISSYFGHKHLSFR"
     gene            complement(46355..47641)
                     /locus_tag="QEL58_000249"
     CDS             complement(46355..47641)
                     /locus_tag="QEL58_000249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008267770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HDS1674775.1"
                     /translation="MSERIAVLGAGPMGLAVAYQLARDGHQPVVFEADDRVGGMTACF
                     DFGGMQIERYYHFHCTSDHDFLAVLEELGLGDRMHWTETRMGYWFGKRLQPWGNPIAL
                     LRFRGLGLMAKIRYGLHAFLCTRRNDWHPLDHVEASSWIRRWVGAEAYETLWRRLFDY
                     KFYNYAGNLSAAWIWSRIRRIGRSRYSLMREKLGYLEGGSSTLLDALHADIQRHGGEV
                     RLSSPVQRIVIEAGRVHGVQVGGEHLAFDKVISTVPLPFVPRLAPDLPEAILAKFRTL
                     NNIAVVCVIAKLRKPVSANFWVNTNDPDMDIPGIVEYTNLRPMDAHIVYVPFYMPGEH
                     ERYGDSDEVFADKVRRYLGMINPQLHADDFIEVRVSRYRHAQPICEPGFLDRLPPRRL
                     PVEGLWVADTSHYYPEDRGISESIGFGRAMAREAMA"
     gene            complement(47644..48603)
                     /locus_tag="QEL58_000250"
     CDS             complement(47644..48603)
                     /locus_tag="QEL58_000250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008267332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HDS1674776.1"
                     /translation="MSAASSSVLEQKIIIPGGAGLVGQNLVAILKRLGYRQLVVIDKH
                     AANLEVLAGMHPDVITELADLAEPGPWERHFAAADAVVMLQAQIGGTDPLPFVRNNIT
                     ATDHVLDAIERHAVPYTVHVSSSVVCSVADDDYTRTKREQEQRVAARNIASVILRPTL
                     MFGWFDRKHLGWLSRFMRRVPVFPIPGHGRYMRQPLYAGDFATIIASCLRSRISGQRY
                     NITGLEKVDYVDIIRQIKRSTGARAMVLHIPYTLFHLLLRTWALFDRDPPFTAAQLQA
                     LVAHDEFEVIDWPSIFGVQPTPFAQAIDATFNDPEYGDIALEF"
     gene            complement(48600..49337)
                     /locus_tag="QEL58_000251"
     CDS             complement(48600..49337)
                     /locus_tag="QEL58_000251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011052380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HDS1674777.1"
                     /translation="MQSVLIIGATSAIAEAVARRYAARGASLFLVGRRADRLAAIGDD
                     LRIRGARATHTHAMDINDLPAHADLLAQAWQALGRVDVVLIAHGTLPDQAACEASVQA
                     CMAEFATNGTSTLALLGPLANRLADAGSGTLAVITSVAGDRGRQSNYVYGAAKAAVST
                     FLSGLRQRLAKRGVAVVDIRPGFVDTPMTAHLRKGPLWATPDQIARRIVAGIGRGTPV
                     LYAPGFWRLIMGVIRTLPQAAFNRITL"
     gene            complement(49340..50644)
                     /locus_tag="QEL58_000252"
     CDS             complement(49340..50644)
                     /locus_tag="QEL58_000252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012509976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HDS1674778.1"
                     /translation="MRARAYSWGRYPRSPQALARVHDRQAGLPDFEGSALPYGNGRSY
                     GDSCQNPGATLLDCRGLDRFIAFDPDSGRLHCEAGVTLDEIIALALPQGWFLPVTPGT
                     RHVTVGGAIGNDVHGKNHHVAGSFGHHVRSFELLRSDGERRLCRPGDADGWFGATVGG
                     LGLTGLVTRAELQLRRVPGSSLEVENIRFCNLADFFALSRESCESHEYSVAWIDCLAR
                     GRSLGRGHFTRANHAAQPLDERPAAPRRQWAMPLTPPVSLVNRLTLRPFNVLYYWRQL
                     PLRRRHASHLLPFFYPLDGIDQWNRMYGPAGFLQYQCVLPPQAAADGIPALLQEIARS
                     GQGSFLAVLKQFGTRPSPGMLSFPRPGTTLALDFPNTGESLLALLRRLDQIVDAAGGA
                     QYPAKDARMTATSFQQSYPRWQDFSRFIDPRFSSGFWRRVTE"
     gene            complement(50644..52086)
                     /locus_tag="QEL58_000253"
     CDS             complement(50644..52086)
                     /locus_tag="QEL58_000253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008576933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UbiA family prenyltransferase"
                     /protein_id="HDS1674779.1"
                     /translation="MPPATPATSPAAHGRALCVDLDGTLLDSDILYESLLVLLARNPL
                     YLILLPFWLLQGKAVLKRRIAARAAVDPRHLPYNPRVLELLRDTPQRPRVLCTASDQL
                     LVAPIAAHLGLFEQVIASDGQRNLSGARKAQALVDAFGERGFDYAGNGTVDLPVWARA
                     SGAWVVNNGPPLASAAARHTQVLGHWPGPSRLQAWVKALRPHQWLKNLLVFVPLLTAH
                     RFLEATAVADALLAFAAFSLCASGVYVLNDLLDLGADRRHPRKRLRPFAAGRLPLLHG
                     LFAGPLLTLCGLAIGLACSPSFATVLLGYYALTLGYSLRLKRVVMLDVVLLAGLYTLR
                     IIGGTVAIGAELSFWLLAFSMFIFLSLALLKRYTELHSVLARGNTRADGRGYDVEDLP
                     LLQSLGAAAGYCAVLVMALYINSPDSVELYRNPKLLWFICPILLYWVSRTWVIAHRGK
                     MHDDPIVFAATDRVSQIVAALCVGFALVAI"
     gene            52259..52981
                     /locus_tag="QEL58_000254"
     CDS             52259..52981
                     /locus_tag="QEL58_000254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004142008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase subunit A"
                     /protein_id="HDS1674780.1"
                     /translation="MQQSTSGGKRFASASQALQGVVADGQTLAVGGFGLCGIPEALIA
                     ALRDSGAKGLTVISNNAGVDGFGLGQLLETRQIKKMISSYVGENKEFERQFLAGELEL
                     EFNPQGTLAERLRAGGAGIPAFFTATGYGTVVAEGKETREFDGKHYVMETALRADVAL
                     VKAWKADEAGNLVFRKTARNFNPACAMAGKVCIVEVEEVVPVGSIDPDQVHLPGIYVH
                     RIVHNAHPEKRIEQRTIRAEGN"
     gene            52983..53615
                     /locus_tag="QEL58_000255"
     CDS             52983..53615
                     /locus_tag="QEL58_000255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004142014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase subunit B"
                     /protein_id="HDS1674781.1"
                     /translation="MAWTRDEMAARAAQELTDGAYVNLGIGLPTLVANHIPVGVDVWL
                     QSENGLLGIGPFPTDAEVDADLINAGKQTVTARAGASYFGSHDSFAMIRGGHVNLAIL
                     GAMQVTAKGDLANWMVPGKMVKGMGGAMDLVAGVQRVVVLMEHTARNGEHKILSECTL
                     PLTGVGVVDRIITDLAVFDVTDKGLLLVEAAPGVSDDELKEKTGVAFQRA"
     gene            53662..54273
                     /locus_tag="QEL58_000256"
     CDS             53662..54273
                     /locus_tag="QEL58_000256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014645863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-ketoglutarate-dependent dioxygenase AlkB"
                     /protein_id="HDS1674782.1"
                     /translation="MLFPHDLPDADVQHLPGWMAAAEADRLMSVLQADVPWDVHRIRM
                     FGRWVDSPRLSCWIGDPQARYRYSGAEFVPHPWLPVLQALREHLQAGNIGRFNSVLLN
                     RYRDGSDSMGWHSDDEPELGPSPVIASLSLGTARRFLLRRRDEPARRAEFVLDHGDLL
                     LMRGQTQRFYQHALPKSARIREERINLTFRWIHSPGAGDRSRT"
     gene            complement(54270..55232)
                     /locus_tag="QEL58_000257"
     CDS             complement(54270..55232)
                     /locus_tag="QEL58_000257"
                     /inference="COORDINATES: protein motif:HMM:NF025025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HDS1674783.1"
                     /translation="MTSSISIAVCTYNGERFLQEQLDSLLAQTRHPDQLVIRDDASSD
                     GTLALLRAFVPRAEALGIAVDLQVNSRNVGYRQNFDGALRACSGDLVFLCDQDDVWYP
                     DKLQRFCAEFDARPELLALHSDAELIDGSGRMLSKRLFSALGYRPSEHARMHAGHGFE
                     LLLKRPLMTGAAMALRRRVLDDALPLPASGWVHDAWISMLAAMRGNIDSLPDPLIGYR
                     LHGNNQVGLGDQDGVSREVRRERQLEIERLQCEQLLVRARALGLPGSRLEWIERKQRH
                     LTVRTRLGPARLRRIPAVMAELLSGNYGYFGRGLLTAAIDLVRR"
     gene            complement(55321..55962)
                     /locus_tag="QEL58_000258"
     CDS             complement(55321..55962)
                     /locus_tag="QEL58_000258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014035908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane integrity-associated transporter
                     subunit PqiC"
                     /protein_id="HDS1674784.1"
                     /translation="MSTTTLPRLLLAASMVTLLGGCSILGSSEKTAVTLYSPAVQVKA
                     DPTWPQASWQLVLAKPSAARMVDSPRINVRPTPSQMEIYKGASWAQPATDMIEDTLLR
                     GFEDSGRIRGVARSSAGIRADYKLSTDVRRFESDYQGQATPTVVIEVNAKLIHVADQR
                     VVADRTFRQAQPVGSTDVPAVTAAFERGLQQLAQDVVGWTLVSGQADQPGVLR"
     gene            complement(55959..56885)
                     /locus_tag="QEL58_000259"
     CDS             complement(55959..56885)
                     /locus_tag="QEL58_000259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016903957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MCE family protein"
                     /protein_id="HDS1674785.1"
                     /translation="METKANYVLIGAFTLITGLALLAFGLWAAKYSSDRTWQEYRVVF
                     REAVTGLSVGSPVQYNGIAVGSITELNLVPDDPRQVVARIRLNSTTPVKTDTRAKLAI
                     TSLTGPSIIQLSGGTPQSPALTTVNKDPAPIIPTTPSALQNITDVANRIVERMDQILS
                     DRNVASINATLANLETISGGLADRDQGTQALLLSARDAARSLDTTLKTTNGTIERLDK
                     NLVQQLPGIIDKLDATLGKLDSAAGNADSILGENRAAINSFANDGLGQLGPTLTELRG
                     LIRDLRRVSDRLENNPARYLLGRDAPKEFEPK"
     gene            complement(56889..57716)
                     /locus_tag="QEL58_000260"
     CDS             complement(56889..57716)
                     /locus_tag="QEL58_000260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005415200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDS1674786.1"
                     /translation="MSTSARPEILDMRDDQGHELAIRVRGLVNRFGSQTVHEDLELDV
                     RRGEILGVVGGSGTGKSVLMRSILGLRTPDEGQIEVLGRDARADDPESRLHIERNTGV
                     LFQDGALFSSLTVGENVQVPLKEHHRELPERWHYELALLKVKLAGLPADAINKLPSQL
                     SGGMRKRAGLARALALDPPLLFLDEPTAGLDPIGAAAFDRLIKTLQEALGLTVFLITH
                     DLDTLYAICDRVAVLADRKVVANAPLPEIEKLDHPWIQEYFHGPRARAARGEQIESA"
     gene            complement(57718..58839)
                     /locus_tag="QEL58_000261"
     CDS             complement(57718..58839)
                     /locus_tag="QEL58_000261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005408002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDS1674787.1"
                     /translation="MAQVTPNLAPQLEQDAHDPGLIRLSGTWTLKTALAAAEVLRGVP
                     EKLTGIDATGIEQMDSAGVLQVLRVAHRADLGEDALQFRQDHQALVCTIEEVADDRPK
                     PKRDFGVLAALERLGVSVHATGHNIKALCSFLGENLVKAARLVKEPRRFRLTATVHQM
                     EQVGLDAVPLVALLSYLVGAVIAFLGSTILRDFGAEIYVVELVNIAFLREFAVLLTAI
                     VLAGRTASAFTAQIGAMKAREEIDAMRTLGLDPVDLLVLPRLLALLVTLPLLTFIAMV
                     AGLAGGITVGAFDLDIPPQMYIARMHETMEVRHMLVGLSKAPVFALVIGLIGCLEGLK
                     VEGTAQSVGERTTSSVVQTISLVIIIDAFAALWFMHMDW"
     gene            58932..60191
                     /locus_tag="QEL58_000262"
     CDS             58932..60191
                     /locus_tag="QEL58_000262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014645868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine exporter family protein"
                     /protein_id="HDS1674788.1"
                     /translation="MSADAHTIPTPQATYAQRVAFVSEIAGRLHSYGTTAQRLETAVV
                     ALARQLDLDCEPWSNPTGIILSFSDPAQAIGSSDITRVIRLAPGENDLHKLSVADHIA
                     EEVSNGRMSIAQGHTALRQLDKDPGRRGKLRTILSFSLGAAGVAGMWKLPWLDIATAG
                     VIGLMIGLLGMVTDRRPATREAAEALAALLAGLVATLVASFIGALNLNTVIIASLVVL
                     LPGMSLTNAVNELASQHWVSGTARFAGALTTIMKLSVGAMIAVTLADVLGLDPVIRAA
                     RPQGPWVEWGSLLTAAFAFAMLFKANRRDYPWVIAASVAGYAISKFGGHAWGAPAGIF
                     LSAMLLTAGGNLFGRLVGRPGAIIRLPGIIMMVPGSTSLRGVLTLVQQQDVGAGQSVF
                     LTVLNVVMALVAGLLFGNLLMPARKTL"
     gene            complement(60302..60685)
                     /locus_tag="QEL58_000263"
     CDS             complement(60302..60685)
                     /locus_tag="QEL58_000263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010480700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="H-NS histone family protein"
                     /protein_id="HDS1674789.1"
                     /translation="MSIDLTGLSARELGALIRTAKKQQTIVAKRRPITKVRAQLTKLA
                     KTEGYTIEELFGGAPAPRARKVATATKAPSKTAGRKLGKVAPKYRNPANPKETWTGRG
                     KQPRWMAELTAKGSKKPEDFLIKKA"
     gene            complement(60908..62611)
                     /locus_tag="QEL58_000264"
     CDS             complement(60908..62611)
                     /locus_tag="QEL58_000264"
                     /EC_number="6.1.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline--tRNA ligase"
                     /protein_id="HDS1674790.1"
                     /translation="MRLSQFHLHTTKETPSDAELTSHRLMLRAGMIRKLASGLYTWSP
                     LGLRVLRKVERIVREEMDRAGAVEFQIPTIQPKELWEQTGRWQKFGPQLLKIKDRKDQ
                     VFCYSPTAEEAACDFARSELSSYKQLPVNFYQVQTKFRDEIRPRFGVMRSREFLMKDA
                     YSFHLHDECLVREYENMKSAYSRIFTRLGLDFRMVQADSGAIGGDASQEFHVIADSGE
                     DALVFSTGSDYAANMEAATAADPAPRAAAGEALRKVDTPTQKTCEDVAALLGIDLQRT
                     VKSVALIAGEGEAQQFVLALVRGDHEVNEIKLAKVAGLAEQRFASEAEIAEHLGSVPG
                     FLGPVAPAKAIRVVADREVAAMSDFVVGANEAGFHLAGVNWGRDLAEPEVADIRNVRA
                     GDRALDGGELKIARGIEVGHVFQLGRTYAKALDATVLDENGKAAVMAMGCYGIGISRV
                     VAAAIEQNHDEAGIIWPDAMAPWQVVVCVINPKGDAAVADAAASLLQELRDAGLDAAL
                     DDRGLRPGAMFADMELIGIPHRVVVSERGLAAGTYEYRSRRASEAESLDKATLLQRLQ
                     G"
BASE COUNT        10665 a        19891 c        20850 g        11259 t
ORIGIN      
        1 gcatttgacg ttgctttggc ttgcaaagca ggtgcagggc tgcaagccct gccgaacccc
       61 ccactgcggt agggtgggcc gatgccgcgc tgcagcttgg cgccgccgca tatttgatta
      121 cacttgaaac ttgtttgccc atgactccgg acacccaccc atgaagcttg gttctttgaa
      181 ggaaggcggc cgcgacggca ccctgatcgt cgtctcgcgt gacctgcgcc acggcgtgcg
      241 cgctaccggc attgccgcca ccctgcagca ggccctggaa gactggagcc acatcgcgcc
      301 gcgcctgaac gccctgtatg aatcgctcaa cgccggcgat gccgacggcg tgttcgacct
      361 cgacccgcag gcgctggccg cgccgatgcc gcgcgcctat gagttcgtcg acggcagcgc
      421 ctaccttccg cacgtcgagc gcgtgcgccg tgcccgtggc gccgaggtgc cggagagctt
      481 ctacaccgat ccgctgatgt accaggccac cagcgcaggc ttctacggcc cgcgtgacgc
      541 ggtcaaggtg gtcagcgagg actacggcat cgacctggaa gcggagatcg tggtcatcac
      601 cgacgacgtg ccgatggcgg caacgccgga acaggcggcg ggccatatcc agctggtcgg
      661 tctggtcaac gacgtctcgc tgcgcaacct gattccgggc gaactggcca agggctttgg
      721 cttcctgcag tccaagccgc gctcggcgct ctcgccggtg tttgtcaccc ccgatgagct
      781 gggcgccgcc tggcaggaca gcaaggtgca cctgccgctg ctgacccata tcaacgggac
      841 gtggttcggc gcgccggaag cgggcgtgga catgcagttc aacttcgccc agctggtcgc
      901 gcatgcggcc aagacccgtc cgctcggcgc cggcaccatc gtcggctcgg gcaccatcgc
      961 caacgaggac accagcaagg gcgcctcgtg cttcgcagag cagcgcgtgg tcgagaccct
     1021 gcgcgacggc aagccgagca cgccgttcat gtccttcggc gacgtggtcc gtattgagat
     1081 gctcgatgcc gctggcaaca gcatcttcgg tgcgatcgag cagcgcatcg agcaggcggc
     1141 caagccctga gcatggaggc ggcaatggag atcccggtcg acgacggcat cgtgctgtac
     1201 acctactggc gatccagcgc cgcctaccgc gtgcgcatcg cgctcgagct gaagggcttg
     1261 gcctgggacg cacggccggt gcacctggtg cgcgagggcg gcgagcagca cctcgacgcc
     1321 tatcgcgcgc tgaatccgca gcagctggtg cccaccctgc tgcatgacgg gcacacgctg
     1381 acccagtcgc tggcgatcgt cgagtatctg gacgagcgtt tcccgcaggt gccgctgctg
     1441 ccggccgacg ccgccggccg cgcgcgggtg cgtgcgctgg cccagctggt ggcctgcgat
     1501 atccatccga tcaacaacct gcgggtgatg cagtacctgg agcgcaacct gcagctgccg
     1561 gccgatgccc gcacgcagtg gaccctgcac tggatcgctg aaggcctggc tgccatggaa
     1621 gcgatgctgg ccagtagtcg cgacaccggc accttctgcc acggcgaccg ccccggcctg
     1681 gccgacctct gcctgctgcc gcagctgtac aacgcccacc gcttcggcct ggacctgacg
     1741 ccgtacccga ccctgcgccg catcgaagcc gcctgccagg cgctggacgc cttcgaccgc
     1801 gcccgtccgg aaaaccagcc cgacgccgcc tgaaagaaaa aaagggacgg aggggattaa
     1861 gtcgtttttg gcacaaacga cttaatcccc tccgtcccct ttctgcagca gctgggccag
     1921 gtcatcgcgg aacaggcgat aggccttctc gcggcgtacg acatcgcctt gccgcagcac
     1981 ccacgccggg tgcacggtgg cgtagccgcg ggtgccgtcc tccagtgcgt gccagcgtcc
     2041 acggtcgcgc gacagattga agtcacggcc aaataccgag gctgccgcgg ttgcgcccag
     2101 gcagacgatg acctgcggct gcacccgcgc gatctcgccc atcagccacg gccggcaggc
     2161 ctggatgtgg cggctttccg gacgcttgtg cagccgggtc ctgccgcggc gctcatggtg
     2221 gaagtgcttc accgcgttgg tcaggtacag cgcggcgcgg tcgataccca gctcggccag
     2281 tgcgcggtcc agcagttgcc cggccgggcc ggcgaagggc tggccacgca gatcctcggt
     2341 atcgccaggc tgttccccca ccagcatcac gccggcatcg gccggcccct ggccgaacac
     2401 ggtctgcgtg gcgttctccc acagtgggca ctggcggcag gcgctggcct gctgccgcag
     2461 attctgcagg ctgcgggtat cggtagccga tatcgccgcc tcttcacgca tgggaatcct
     2521 gcgctgcggc gcctgtgcgg gacgatcatg catttcctgc acgcgatcgc ccgcatcgcg
     2581 taccaggcgc ggcagcagct gcgcctcggg caggtgccgc cagtacttgg ccggcatctc
     2641 ctgcatcatc atccgtgtgt tgagccgtgc cggattgaag atgctggcgt agtaggtctg
     2701 ccacagggcc tcccgcgcat cctcggccgg agcgtcctca cgccgtgccc ctgggccaaa
     2761 ggcaagcgcc tgcccatccc acgcgacgct gcgcgagggt gtcaggatgg cccagcgcat
     2821 gccggtgaag cgacgcgcga agaacggtgc cacccgatcg acgatgtggt gctggggttc
     2881 gaaccacgcg atgaacgcct cgggctggcc cggaacctcg cgaaagcgca cgaatgcctt
     2941 catcttgtgc gtgtcacggc ggacggcctg ggccagtgcc atcgcacgca gcacatcggc
     3001 atcggcgggg ttggtcagca ccgcacgttc gccatgggtg atccgccata gcagccgata
     3061 cagcagtgac aggcgctgcg gctcgctatg gcacaggcag gtggcggcca ggtcgaggaa
     3121 ttcgcgcggg acgttgggag cggttgcacc tgccggcgcc gctgcctgct gcaccagcgg
     3181 cgcatccagc agcgacgctt cgctgccttc gagccagtcc agctgctcgg gcgacacgcc
     3241 gcgcagcaac gcatcacgcg cgccgtcgcg ccaggcctgc agtgaccagg ccgggtccac
     3301 ccgctgcgac cagcgctgcg cgtcaggctg ccggcggtgc atcgaatagc gatccctggc
     3361 gcggtggtgg cgccagctgc gcgcgcagcg cggccggatc atccagcgcc ttgcgcggat
     3421 gatggtcggc cagcagcacg aacggcagca gcttgctcat cggcgccttc aggcgggcga
     3481 tgtcggccac gcgcaggcgc ccatggcggc gggccatcag cacgcgcttg gtattgcgca
     3541 cccccaggcc gggcacccgc agcagcattt ccttcggggc acggttcaga tcgaccggaa
     3601 agcgttcggg atggcggatc gcccaggcca tcttcggatc gatatccaga tcgagcatcc
     3661 cgccttgcgt ggtgtcggtg atctcgtcca cgccatagcc atagaagcgc aacagccagt
     3721 cggcctggta cagccggtgc tcgcgctgca gcggcggggg ttgcaggggc agttgccggc
     3781 tggcatcggg aatcgggctg aacgcggagt agtagacccg gcgcatgcgg tagttgccgt
     3841 acaggctgtc ggcgctggtc aggatctgct ggtcactggc gccatcggca cccacgatca
     3901 tctgtgtgct ctggcctgcc ggtgcgaaac gcggctgctt cggccgcgcg ctgcgggtga
     3961 ctgccggtgc cagcacggcc ggtgccttgc gcgcctccct ggcttcctcg atccgccagc
     4021 gcagctcgcc catcgcgcca cggatcgagt gcacggtctt ctccggcgcc agtgcactca
     4081 ggccggcctc ggtgggcagc tccacgttga tggacaggcg gtcggcgtgg cgcccggcac
     4141 tggccagcag ctcgggcgag gcttcgggaa tggtcttgag gtggatgtag ccggcgaatc
     4201 gatgttcctg gcgcaggcgc cgcgccacct ccaccatctg ttccatcgtg taatcggcat
     4261 tgcggatgat gccgctggag aggaacagcc cttcgatgta gttgcgcttg tagaaatcca
     4321 gggtgagcgt gaccacctcg tccacgctga atcgcgcgcg ggccacattg ctggaaacgc
     4381 ggttcacgca ataggcgcag tcgtagatgc agaagttggt cagcaggatc ttcagcagcg
     4441 atacgcagcg gccatccggc gtatagctgt ggcagatgcc catgccctcg gtgctgccga
     4501 tgccgccgct ggcacgcgag tcgcgcctcc ccgagccgct ggaggcgcag gacgcatcgt
     4561 atttggcggc atcggccagg atggccaact tgcggatggt ttccattgag gaaacctacg
     4621 gacgggaggt ctcatcggat gagacacctc ctgaaccctt cagaaaaagg ggacggaggg
     4681 aatcaagtcg taagtgcatt tacgacttaa ttccctccgt ccccttttcc tagaagccgt
     4741 gggtgatgct gggtgcgccg gccgagaaat ccgcgtacgg gtcgtgctcg ccggtgctgc
     4801 cttcggacag gcggaacttc agcgcaaggc catcgcgtga gtcggccgcg cgcagcgcct
     4861 cttcctgatc gatgacgccg gccttggcca gccggaacag gcactggtcg aagctctcca
     4921 tgccttcctc cagcgagcct tccatcgccg ccttgatctc gtgcacctgg ccgcggcgca
     4981 gcaggtcgcg gatcatcggc gtgttgatca gcacctcggt ggccggcagg cggcgaccct
     5041 ccttgttctt caccaggcgc tggctgatca ccgcacgcag gttcagcgcc aggttcatca
     5101 gcacgttctt gtgcgcgctt tccgggaaga agttgaggat gcgctcgatg gtctggtcgg
     5161 cgttgttgga gtgcagggtg gccaggcaca ggtggccggt ttcggcgaag gcgatcgccg
     5221 cctccatcgt ctccgcatcc aggatctcgc cgatcaggat cacgtccggc gcttcacgca
     5281 tggcgttctt caacgcgtta tggaaggcat gggtgtccag cccgacctcg cgctggttga
     5341 cgatcgacat cttgtgcttg tgcaggtact cgatcgggtc ctcgatggtg aggatgtgcc
     5401 cggtggtggt gctgttgcgg tggtcgatca tcgacgccag cgaggtggac ttgcccgagc
     5461 cggtggaccc caccaccagc accagcccgc gcggggtcat gatgacgtcc ttcaacacct
     5521 gaggcaggtt cagctcctcg atgctcggaa tccggctgcg gatggcgcgg atgaccatgc
     5581 cgacctcgcc ccgctgcttg aacacgttga cgcggaagcg cccggcatcg ggcagggcga
     5641 tggccatgtt gagctccagc tcgcgctcga actgcggcac ctggccttcg tccatcagcg
     5701 agtaggcgat cttcttgacc atccccggcg gcaggccggt attgcccagc ggatagagct
     5761 tcccctcgat cttgatgtag accggtgccc cggtggtcag aaacatgtcc gaagcgttct
     5821 tttcggtcat cagcttcagg aagtagccga tatccattgc gaattttccc caacgaaacg
     5881 gccgacgccc gttgccagca cggtgtcggc ttgacgacaa tggccgtgaa ccgacaaccg
     5941 gtacggcctc cccaatgaaa cgacttagct tcgcacgaat gcgccatggc ctgtatgtga
     6001 tggcgtttgc attcgcactg tctgcccccg cctgggcgca ggacgccgcg ctggaactgg
     6061 cgcaggcccg acaggcggtg gacaaggcca cccaggccga tgccgaccag tacgccccgg
     6121 acctgatcgg gctggcccgg caggggctgg agcaggccca gcgcgccgcc ggcgaccgcc
     6181 gcgagcgcaa gaacgccccg gcgatggccc tgcgtgccgc cgccgacgcc gacctggccc
     6241 gcgtccgcag cgaggaagcc accgtcaccg cacagctgca gctgcgccgc aacgaggtca
     6301 accagctgca acgccagctg tcgaccgggg aggaccgccg gtgaagccga tgactgccgc
     6361 aagcctggcc gcgctgctgg cgctgccgac cctggccgtg gccgccgaca acccgatggt
     6421 ggcgcagctg agccagcgcc tgatggccat ccaggccaac cccgacaccg ctgagctggg
     6481 cgcgttcgag cgcatgcagg cccagcaggc gatcgccacc ctggacaagg ccaagcgccg
     6541 cgaccaggaa ctggccacct atctggccga gcgccgggtg gagatcgccg agaccgccgt
     6601 gcgtaccgcg atggccgcgc gtgaggtcga ccgcctggaa cgtacccgca gcgatctgct
     6661 gatcgaggcc agccgccgcg atgcggcccg cgcccgccag gaagccgagc agctgcgcat
     6721 gcaggcgcag atgcaggccg aggaggccga gcgcctgcgc caggccgccg aggccgagac
     6781 cctggcccgc caggatgccg agaatgcgtt gaccagcgtg gccggcaagc agcagcagcg
     6841 cctcagcgcc gcccagcaga acgccgccaa gctggcccgc gaggaagccg agctggtgtc
     6901 cgggcagaag ctgccgggct cgaagttcga tggccgtggc gaagtcttca ccttcaatgg
     6961 cgacgcgttc gccgccggcg cctccagcct gtccggcggc gcccgcaacc aggccaaggc
     7021 actggccgaa tacctgaaca tcggcaagaa gggccgcctg cgcatcgagg cctacgacaa
     7081 cgccaatggc gtgggccaga agcgggccga agcgctgcgc gacgccctgg tcgcagccgg
     7141 tgtcgccagc aaccggatcc aggtcagcgg caagaaggcg gcctccaccc gggcgcgctc
     7201 ggccgaggtc atcatcgccc cgtaatgcat tgatattgtt tgtttttcgt tgcgatgagc
     7261 attcagcctg aaccccgccc cggcggggtt cggtcttttt gacgcagggg cttgaacccc
     7321 gcccggagca ggcgtagggt caatcgtccg ggacgcaatg ccgcggaccg gacgatggga
     7381 gggccgggcc gatgcaagca gggcgcgaac cgcagcagat cgacgtgcgc aggccagtgc
     7441 cgcaggtcgt tgcaggcgtc caggtggcca tcgaccggca ctcctccatg aacaacgccc
     7501 cgtgccttgc ggccggggcg ttcgtgtatc tgtcgaagga ggtccatcat gtttgaagat
     7561 cagccccaga gcgagatcga cgcacgtcgc gcgcgtgatc cggagttcag ggcactccat
     7621 gaccagcacc gcaagttgaa caagaagtgc atggacgcgg agttgggtgt actcccgatc
     7681 gatgatgtca ccctgggtcg catgaagcgc gagaagctgc tggccaagca acgacttctg
     7741 cgaatgtacg aaacaccgct cccgatgacg tcccccacgc tttgacgcac cccgtcgcgc
     7801 ccggaacggc gtgacccggc cagtgatggc cccgccgggc gctcctgccc cggcatcgcg
     7861 gcaccgccga tgaggcggcc gcgccaaggc accacaggcg gtggtgcctt ggcctgcagg
     7921 cacaactcac cgatgcgggc ggtaccggtc tcctcgtcga tccggggccg cccgcatctc
     7981 tttcagggcg ggcgtccggg taggtcgatt ccgacctgac attcaacgcc atccggcgga
     8041 taatcatcgg tcctgccccg tgcggcgcga accgacagcc cccgaatgcc catccattct
     8101 tccgtcctcg aactcatcgg ccagaccccg atcgtcaagg cccagcgcct ggacaccggc
     8161 gtctgcgagc tctatctgaa gctcgagagc gccaacccgg gcggatcgat caaggatcgc
     8221 atcggcctgt cgatgatcga ggcggcggaa cagcggggag atctgaagcc gggcgcgacc
     8281 ctggtcgagg gcacggccgg caacaccggt ctgggcctgg cgctggtcgc ccagcagaag
     8341 ggctataagc tgatcctggt cgttcccgac aagatgagcc gcgagaagat cttcaacctg
     8401 aaggcgatgg gtgccgaagt gcgcctgacc cgctcggacg tggccaaggg ccaccccgag
     8461 tactaccagg atctggccaa gaccatcgcc gagcagaccc cgggcgccta tttcatcaac
     8521 cagttcggca acccggacaa cccggccgcg cacgagttcg gcaccggccc ggagatcctc
     8581 gagcagatgg gcggcgatct ggacgccatc gtgttcggct gcggcagctc cggcaccatg
     8641 accggcctgt cgcgcgcgtt cgccaaactg tcgccgaaga ccgaactggt gctggccgat
     8701 ccggtcggct cgatcctggc cgagtacatc aatgagggca acctcaacga caagtcgggc
     8761 agctggctgg tcgaaggcat cggcgaggat ttcctgccgt cgatttccga cttcagccgt
     8821 gtcaccaagg cctatgccat cagcgacgcc gagagcttcc acaccgcgcg tgagctgctg
     8881 ggcaaggaag gcatcctggg tggctcgtcc accggcaccc tgctggccgc cggcctgaag
     8941 tactgccgcg agcagagcac gccgaagaag gtgctggtgc tggtgccgga caccggcaac
     9001 aagtacctgt cgaagatgta caacgactac tggatgctgg acaacggctt cctgcagcgc
     9061 ccgcagcacg gcgacctgcg tgatctgatc ctgcgcccgt acggccagcg cgacaccgtg
     9121 gtgatcggcc cgaacgacct gctgaccacc gcctaccagc gcatgaagct gtacgacgtc
     9181 tctcagctgc cggtgatgga cggcgatcag ctggtcggca tcgtcgacga aagcgacgtg
     9241 ctgctgcacg tctatggcga tgaagcgcgc ttccgcgaca ccgtcgccac cgcgatggtc
     9301 agcaagctgg accggctgga cgtgaagtcg ccgatcgagg ccctgctgcc ggtgttcgac
     9361 cgtggccagg tggcgatcgt gatggatggc aacagcttcc tgggcctgat cacccgcatc
     9421 gatctgctga actatctgcg tcgtcgcgtg cagtaagccg aagaacgctg aagatcgtca
     9481 cagatcgcca ctgaattcag gtttatctgc gtcaaaggtc attaaggccc cgctggtaga
     9541 ctcccgatcc tttgacggcg ccgcaggtcg gcgccattca ggaaacgaca tgtcccactc
     9601 ctcttcgccc gaccgggcac tggctctggc caccctggcc atccacggcg gccagtcgcc
     9661 ggacccgagc accggcgcgg taatgccgcc gatctacgcc acctcgacct atgcccagtc
     9721 cagcccgggc gagcaccagg gtttcgagta ctcgcgtacc cacaacccga cccgcttcgc
     9781 ctacgagcgt tgcgtggcat cgctggaagg cggcacccgc ggcttcgcct tcgcctcggg
     9841 catggcggcc agctcgacgg tgatcgaact gctggatgcc ggcagccacg tggtggcgat
     9901 ggatgacatc tatgggggca gcttccgtct gttcgagcgt gtgcgtcggc gcaccgccgg
     9961 gctggatttc agcttcgtcg acctgaccga cctggatgcg ttcgaggcat cgatcacgtc
    10021 gaagacgaag atggtctgga tcgagacccc gaccaacccg atgctgaaga tcgtcgacat
    10081 cgccgcggtc gtcgccatcg ccaagcgcca tggcctgatc gtggtggtcg acaacacctt
    10141 tgcttcgccg atgctgcagc gcccgctgga cctgggtgcc gacctggtcc tgcattcggc
    10201 caccaagtac ctcaacggcc actcggacat ggtcggtggc atggtggtgg tgggtgacaa
    10261 cgccgagctg gccgagcaga tggccttcct gcagaactcg gtggggggcg tgcagggtcc
    10321 gttcgacagc ttcctggccc tgcgtggcct gaagaccctg ccgctgcgca tgaaggcgca
    10381 ctgcgccaac gcgatggcgc tggcacagtg gctggagaag cacccggcgg tggagaaggt
    10441 gatctatccg ggcctgccgt cgcatccgca gcacgaactc gccggcaagc agatggccgg
    10501 ctatggcggc atcgtctcga tcgtgctcaa gggcggtttc gaggcggcca agcgcttttg
    10561 cgagaagacc gagctgttca ccctggccga gtcgctgggc ggcgtggaga gcctggtcaa
    10621 ccacccggcg gtgatgaccc atgcctcgat cccggtggcg cgccgcgaac agctgggcat
    10681 cagtgatgcg ctggtgcggt tgagcgtcgg tgtggaggac ctgggggacc tgcaggtgga
    10741 cctggaaaac gcattggatg cggctgccct ccgcggtgcc tgacatgagc cagccgacat
    10801 acaggattcc cgccggctac cggttggtgc agtgggtgat ccgccagcag tggttgagag
    10861 ccgtgtacag gcatgtgccg tcccgtctgc gcgacaaggt ggctgggcat ctgctggcca
    10921 cgtccaagga ggagcaccat catcgcttcg agggcgaggc gcgctgggcc gagaggcggc
    10981 acgccgtgcc cgatgcgcca gtgcatttct tcggcgggat ggacccggcg tggagccgcc
    11041 acggctgcaa catcttcgcg tatctgcgtg ggcagttcgg cctggccgag tgcgcgcgtc
    11101 tgtatgcccg cgcgctgctg ggcgcgcgtt atccggctgc gcttgtggat gtcgacatca
    11161 atctgccgca tggctggaac gaccacagcc ttgacgagta catcggaaac gatgcgccgc
    11221 atcgtgtcca tctgatcttc gtcaatcccg acttccttga tgccgcgatc gaacagatcg
    11281 gcagggcacg actgcagggt ggctacatca tcgcctgctg gttctgggag ctggagcagg
    11341 ttcctgattc ctggctgcct gccatcaatc aggttgatga gatcctggtc tcttcacgtt
    11401 acgtgggtga cgcattcgcc cgtgtcacca gcaagcccat cctgtgcgtt ccgctgccgc
    11461 tgagcgaagt gggagacagt ggactgcagc gacaggactt cggaatcgcc gagaaggact
    11521 tcgtcttcct cacctcgttc gacttcaact cgttcgtgca ccgcaagaat cccttcgcga
    11581 ccgtgcgggc cttccagcag gccttcccgc gtgatcggcg tggcgtgcag ctgatcatca
    11641 agaccagcaa cggctatcgc cgtcctgagc ggctccagct ccttctggag gccgtcaagg
    11701 atgatccgcg gatcgttgtg cgcgaccacg tgctcgatcg tgccgatgtg caggcgctcc
    11761 agcgctgtgc tgatgtgtat gtgtcgctgc accatgccga ggggttcggc ctggggctgg
    11821 ccgagtgcat ggcgcagggc aaaccggtga tcggtaccgg ctggtcgggc aacatggagt
    11881 tcatggatgc cgggaacagt gcacttgtcg gctacacgct ggtgccggtg ctggaaggcg
    11941 agtacgcgca ccacgaagga cagcgctggg ctgccgcgga cgtggaggag gcggcgcact
    12001 ggatgcgccg gctggccgac gagccggggc tggcccaggc gatgggcgaa cgtgcccgcc
    12061 aatcggtgct gcagaccctt tctcccgagc gtgcagcagc tgcgctgatc aaccgtattg
    12121 aacagatcca tcagcagcgc ggattgacct ccgctgcgct gcccatgcag gaagtacagg
    12181 actgatgcac agctactcgt caaccttcaa agatctcctt gatggcatca ggggggccaa
    12241 agttccgctc tacatcgcca agggtgatat caccgcgcgc taccgtcgca gcgtgctcgg
    12301 gccgttctgg cagtcgctgg ccaccgcgct gggcgtggtt ggccttggcc tgttgtggag
    12361 ccagctcctc aagatagaca agcagacgtt cattccgacg ctgacggcgg gcctgatcat
    12421 ctggcagatg ctgtcgggca tcctgatcga aagctgtggc ctgttcgtgc ggcaggcgtc
    12481 gatcatccgc aacgtggtga tgcccttgtc cgtgcacccg ttgagcgttg tgatccgcta
    12541 tctggtcaac ttcgcccaca gcctgctggt gttcgtgatc gtagcgatcg tgatgaaggt
    12601 tgatgtcggc tggaacacgc tgctgttcat cccgaacctg gccctggtcg tggtcaacct
    12661 gctgtggctc tcgttcgtgt tcggcgtggc cggcgcacgc tatcgtgatc ttgaatacgg
    12721 cgtggcttcg atcatgccga tgctgttcct ggtcagtccg gtcatgtatc gcctggaata
    12781 cctgccgttc tcgtcggtga tcctcgagtt caacccgttc acctacctga tcgaggcgtt
    12841 gcgtgccccg atgctgggcc atgtcgccag cctgcagacc tacgccgtac tcgccgtcat
    12901 ggcgatcgtc ggctggcttc tggccttctg gatgctgcac aaggccaagc ttcgcctgcc
    12961 tttctggatc tgatcatgac cgccaagctc aatttcgaga acgttaccct ccgttatccc
    13021 atctacaact cgcacagcct ttcactgcgc cggaacctgg tgggcatcgc caccggcggc
    13081 aagttgatgg ccgcttcggg ccaggtcacc caggtcacgg cgctggacaa tatttccttc
    13141 agcctgaagc agggggatgc ggtaggcatt gttggccaca atggcgcggg caagagcacg
    13201 ctgctgcgcg ccatggccgg catctacact ccgttggagg ggcgcgtcga gcgggtcggg
    13261 cggattgcca cgatgctgga agttggcgcg ggcatggatc cggaactgtc cggctacgag
    13321 aacatccgtc gcatggggat gatgctggga ctgtccttga aggaggtcaa cgagcggatc
    13381 cccgagatcg aggagttcac cgacctcggc gatttcctgc agctggccgt gcgcacctat
    13441 tctgcgggca tggccatgcg gctgatgttc gcggtggcca cctgcacgac gcccgatatc
    13501 ctgctggtcg atgaggtgtt tgacgtcggt gacgaggcgt tcaaggatcg cgccgccaag
    13561 cgcatgcacg atttcatcaa gtcgtcgcag atcttctgcc tggcttccca ctcgatggac
    13621 accatcgcca agtactgcaa tcgtgcgttc gtgctcaacc acgggacctt gcgcgaaatc
    13681 ccgatttcac agctcacgtc ggaaggatat ggcattgaaa atcaagctgg gtaatgctgt
    13741 aagcagtgct gccgacaagg ccgcgcagtc gcgcgcgagc gacggtttcc tggccccggg
    13801 ggaggagctg gtactgagca gttcctccta cgcgagcatg gacgcgatca cgatgcgtgg
    13861 ttttgccctg cccgaatctg atggaatctg gtccagcggg gcgatcaaca caattgatgt
    13921 gcgcctgcgc ggagtcgacg ccagccgccg ctatcgagtg atgatcaatg ccatcgcctt
    13981 cgagggcagc gggcatcgcg cgctggtctc gatgcgagtc aacgacgggc ccgcccacca
    14041 ggtattggcc aacagcgtcg gctggtcctc gatcgtggcc gactgggaag tgcaggttgt
    14101 aggcaagatc ccgatggtcc gtatcgagtt ccaggtcgcc aatccgatgt cgcctaccgc
    14161 aataggcctg ggcgacgaca accgcctgct gggattcaag gtgcgctcgc tgcagttgct
    14221 tgatctgggc ccggccagca cggcggtcgc agcaacgcct gtggtcgtgg agacagttga
    14281 agttgccgac gtgccgcagg atgccaatgc gggtgtcgtc ggggtcttcg cccagtcacc
    14341 gaccgagacc atccgtgcac ttgccaagcg cggccctatt ctgcgcatgc tgttgctgga
    14401 caagaatccc gtggttcgcg tggtgcgctg gatgcgccgg gtcagccgca acatggagga
    14461 gatgcgtcgc cagctggacc tgatccgaat cgattcggcg cgtcagacgc gtgagcttgg
    14521 cgaacgcgtg gacaacatcg agatcgacgc ccgtgtgcag gagcgcgaac gtcgtcgtgc
    14581 cggttccaac gttgatgcga tcatcgagca gctggagctg aatcatgctc gtctgctggc
    14641 catcgaggag tcggcgcagg aggtcggtcg catgcatgag cagcgccgcg acgagcacgc
    14701 tgacagtctg gaaagcattc tcgctaccac cgatggcctc ggtcgcgacg tggcggcggt
    14761 gctggacacg ctcaatacca ccctgtccga gtcgatgcgg atgctgcgtg aattcgagag
    14821 cgtcgacaac aagctggcgg gaatggatcg cgccctgcga ctggtgcaga tccagggaga
    14881 agaacatgcg cggcatgcga tttccggcat ccgcgagctg cgtgagcagc tgcacctgtc
    14941 cctgcagcag cagcaggtcc gctcggaaga ggcacaggcc ggcattgagt cgagtctgca
    15001 gggcatgatc gagcggcagt ggtcggagtc agatgaactg cgtcagcaca tgcagtccac
    15061 cttgcagctg ctggagaaaa ggcaccaggt tgagcgcgag gagctgaagc agcaggttca
    15121 ggaaatcctg agcgaaggcg cgcgctcgct tgacgtgcgc aacaatgtcg atgccgaggt
    15181 gttgcgtcac cacgtgctgc gcctgcatga gcgcctggat catctgtcgg tggtcaagcc
    15241 gggtgcgggg ggctcgatcg tggtcgccga ccgtgcagtg tcggagcagg cactgcaatt
    15301 gatcgccctg ctgcatcaga agctggacaa cagtgcgctc gagaccggcc aggtactcga
    15361 gctgctggtc gccatcaggg atcgggttga ggcccagagg ctgacgctgt ccagtgccgc
    15421 cggccgttgg gccggggctg cccagcgacg cgtgctgcgc cgccatgatg gctggttgat
    15481 aaacgtcgag ttcggcacgt tctcctgcag cgagagtgac gacctgctgg cgatgtacct
    15541 gctggaaagt ggtgacgtcg agcgcggtct gcggctgttc ctgcagcatg cgctgaagcc
    15601 gggtgatgtg ttccttgatg ccggtgccaa catcggcctg catacggtgg ccgccgccca
    15661 cgtggtgggg ccgtcaggca gggtctacgc cgccgaggcg atgccgcgaa ccctgcagca
    15721 cctgcgtgcc tcgctgaggc tgagtgcggt tgaggaccgt gttgaagtgc tgccggtggc
    15781 gttggggtcc tgcgacgagg atgggcgtga gttccatatc ggcgcggtgg ctgggcacag
    15841 ctctctgtat ccgatcgaca cagaggttga agtgctgcgg gtcgacgtga ggacggtgga
    15901 cggattgctc ggcggcaccc gggtggcact ggccaagatc gacgtcgagg gtgccgaact
    15961 tgaggtactg gcgggcatgc gtggactgct ggccgccaac cccgacatgg gcgtgatagc
    16021 cgagtacgcc gtctcgcacc tggcgcgtgt tgggaccagc gaggcggaat gggaggcgtt
    16081 ccgtgccgag cacgccttcg atctttaccg gatcgacgat ctgactggcg cttgcgtgcc
    16141 gctggccggc ttctcggcgc tgcgcgagca tgcaagctcg aacgtcctgc tgtgccagcc
    16201 ggggagcttg ctgcccggcg ctgttgctgc tggaggcgct gaatgagcag ggtcgccgtt
    16261 gtcggcgcag gtgggcacgc caaggtgatc atcgatctgc tgcgtggcgg tggtcacgag
    16321 gtggttgcct gcctggacgc ggggcgcgtt ggccaggtcg tcaatggcgt cccggtcctg
    16381 ggggatgagc gcgtgcagtt gccgctcctc aaggatcagg gtgtggatgc ggtcttcgtc
    16441 gccctggggg acaaccggct gcgccggaag gtagcggcgg cggtcaccgc agccggcctg
    16501 gaaatgatcc ccgccgtcgg ccgctctgcg gtgatctctc ccagtgcccg catcggccag
    16561 ggttgcgcca tcatggaagg ggcaatactg aatgcggatg tcgtagttca cgattttgct
    16621 ataattaata caaatgcgtc cgtcgaccac gattgcgtgg ttggcgcatt cgcccatatc
    16681 gccccaggca gtaccctcgc cggtggcgtg gaggtgggtg ccagcgtgtt tctcggagcg
    16741 ggtactcgag tgattccggg gatcaagatc gcggatggcg ccactgtcgg cgctggcggc
    16801 gtcgtggtca gggatatcga ctcaaccgga acgtgggttg gcgtgccggc acggcaaatc
    16861 aagataaagg actgatcaat gttggcctca aagcggattc cggtagcagt tcccagcctg
    16921 tcgggcaacg aaaagaagta tgtgggacag tgcctagatt caacgtggat ctcttcggcc
    16981 ggcgaattca ttggtcgttt cgagcagagc tttgctgact tctgcggcgt tcgccatgcg
    17041 gtagcgatca acaacggcac caccgccatt catctcgcgc tggtggcgtt gggtatcggc
    17101 gaaggcgacg aagtgctgat cccgaccctg acctacatcg ccacggccaa tgcggttgcc
    17161 tactgcaacg ccaagccgat cctggtcgac tccgagcccg gcaccatgaa catggatccg
    17221 gccaagctgg aagccctgat cacgccgcgt accaaggcga tcgtcgtggt gcacctgtat
    17281 ggccatccga ccaacatggg gccggtcatg gacatcgccc gccgccacaa tctcaaggtc
    17341 gtggaggacg cggcagaagc acacggcgcc gagtacctgg gcacgcgcgt gggtggaatc
    17401 ggcgattgcg ccactttcag cttctttggc aacaagatca tcaccaccgg tgaaggtggc
    17461 atggtgacca ccaatgatga tgggctggcg gcccgcctgc gcctgtaccg cgggcagggc
    17521 atggacccga agcgccgcta ctggttcccg gtggtgggtt tcaactaccg catgaccaat
    17581 gttgctgcag cgatcggcgt ggcccagatg gagcgtatcg acgaggcact gcaggtgcgc
    17641 cagcgcgttg ccggctggta tgaggctgct tttgcgcagc acgtggatct ggtcgagcgt
    17701 ccggccgtgg ccgagtacgc gcaccatgtc tactggatgt acaccgtgct gctgacaggc
    17761 ctgagtgaac agcagcgcga tgaagtcatg cgcctgatgg atgccgatgg catcgaaacg
    17821 cgcccggtgt tctacccgat gcatgtgctg ccgccttacc tcgaagacgg ggctgcctac
    17881 ccggtcgcca acgaccaggc tgcgcgtggc atcaatctac cgacgcacgc cgaccgcact
    17941 gaagaggacg tcgagcgcgt cgtggaagcc ctggtatcgg ccatcggccg cgtgagcgcc
    18001 tgaccttgcg tattgccatc tgttcgtcct ttgtaccgtt cgtcaatggt ggagcgcgct
    18061 tcatcgttga ctggcttgga agccgtctgc gcgaacatgg ccaccaggtg gagatcatct
    18121 acctgccgat ggtcgagtcg ccgactgaac tgctgcagca gatggcggcc tatcggatga
    18181 tggacctctc cgattcggtt gaccgggtga tcaccacccg gccaccggcg cacctgatcc
    18241 agcacccgaa gaaggtggca tggttcattc atcatttccg cttgtactac gacatgtggg
    18301 acacgcccta tcgcgagttc cctgatgacg cccgccatcg cgccctgcgt ggcgcgctgg
    18361 tcagggccga taccacagca ctggccgagt cgcaccggct gttcaccaac tcgcaggtgg
    18421 tggccgatcg tgtgaagaga tacaacggcc tggatgccga agtgctgtat ccgccattgc
    18481 tggatgtctc gcacttccgc gacgcgggcc agggcgacga gatcgtctac gtctgccgga
    18541 tggaacggca taagcggcag catctgctgc tggaagcatt caagtacgtg accacgccgg
    18601 tcaagctgcg cctgtgcggc accagcagtg gcccgggcta caccaatggc ctgcgtgcct
    18661 tcatcgttgc cgaaggcctg cagaatcgcg tcacctgcgt tgaccgttgg atcaccgagg
    18721 aagagaaggc gcagtggctg tccaccgcgc tggcagcggc atacctgccg gaagatgagg
    18781 attcctacgg ctatccatcg ctggaggcag cgcagtcgtc gaagccgatc atcaccacca
    18841 ccgattccgg tggcgtgctt gagttcgtcg agcatggtcg caacggcatg atcgccgagc
    18901 cggacccccg ggcgctggcc gaggtcatcg atgcgctgtg gatggatcgc gagcataccc
    18961 gccgcatggg ccaggcggcc aaggtgcgtg tgcaggaact gaagatcaac tgggaccacg
    19021 tcctggagcg tttgctgtca tgaaggtcct ggtcgtcaac aacatggtac cgggcatgcg
    19081 cggtggcgca gaggaactgg ccgaccagct cgtcgtgaac ctgcgccagg ccggtcatca
    19141 atccgagctg ttgcgcatcc cgttcacctg gcacccgccc gagcggatca tcggcgagat
    19201 gctgatgtgc cggagcatgc gtctggtcaa cgtcgatcgg gtaatcgcga tgaagttccc
    19261 cgcctacctg ctgcctttca agaacaaggt gttctggctg gcacaccagt accgccaggc
    19321 ctacgacatg tgggattccg gccatagcaa cattccggac acccccgagg gacggcagat
    19381 ccgcgctgcg atcaccgagg cggacaacga cgcgttctcg atggcgcaga gcgtctatgc
    19441 cgtgggtcgc actgtgcagg accgtctgat gaactacaac ggcatcccct ccgagttgat
    19501 gcgcgcgccg ttgaacgacc ccgagctgtt caccggaggc aagtacggtg actacatctt
    19561 cgccggcggc cgcatcaatg ccggcaagcg tcagcaccgt ttggtcgaag ctttggccca
    19621 gacgcgttcg ccggtcaagt tgattatcgc cgggccagcc gataccccgg aggacgaacg
    19681 gcgccttcgt gccctggtcg agagccacgg gctgcagggg cgggtgaagc tggacatcgg
    19741 cttccatccg cggcaggtga tcgccgacta cgtcaatggt gcgttggcct gcgcctatct
    19801 gccgatggca gaggattcct tcggctacgt caccatggag gcctgccagt cgcgaaaggc
    19861 ggtgatcacc gtcgacgatt ccggcgacct caccgagctg gtcaagcacg gggccaatgg
    19921 ctgggtgtgc gctgacgata ccggcgaaat cgctgcggcc atgaccgagg cattcgcctc
    19981 ccgtgcacag acccgcgagc gcggagacaa cgcatacgac agctggaccc gcctggatat
    20041 caactgggca tcgacggtgg agaaactgac gcgatgaaga tcgtctgggc cggcccctat
    20101 tgcggacagt cggcgatcgc ccgtttcagt ctccaggtgg tcaatgccct gcgcgagctg
    20161 ggccatgagg tcgccatcta tcgcaccgag accggcgaag cagcgtccta tcctgcactg
    20221 ccggatacga cggtgctgcc ctccggcagt gcgatggaag acgaatggct gcgtacggcc
    20281 gatctggtgt tcgccaatgt cggcgatcat tacggcttcc acggtggcat cttcgagctg
    20341 gcgcgcaagc gccagttcat cggcatcatg cacgactggt tcgtgctgaa cctgttctgg
    20401 ggaatgctga gggtcgaagg gcggcagcag gacgcgccgc gcattattca aggcctgtat
    20461 ggtcaggagg cgggcgagct gtgtgccgcc gctacttccg aaaccatcat gcaggtggcc
    20521 gccacgcatt tccccatgac agagtgggcc gtggcagaca tgcttggctg catcatccac
    20581 tccgagttct atcgcgccaa ggtgcaggca cgctgcccgg gcccggtgca caagctgtcg
    20641 ttggcctatc cggcgccgga cgtgaggcag gacctgcggt cggcggtgga tgatcacagc
    20701 cgcctgcggc tgtgcacgct gggtgtggtc aatccgaaca agtgcgttga caaggtcgtg
    20761 cgcgcgttga tgcgtgaccc cgggctggcc gcacgcaccg agtaccgcgt actcggcggt
    20821 gtcagcgagc aggagcgcaa gcgcttggaa ggcatctgcg ccgaggtcgg cttccgcggg
    20881 ctggtgcttg agggtcgggt cagcgatgag cgcctgctgg aaggcatggc cgaagcggac
    20941 gcgatctgct gtctgcgcga tcccgcgctg gaaggtgcgt cagcatcggc catcgaaggc
    21001 atgcagtccg gggtgccagt catcgtgtcg gatgccggct tctatgccga ccttccggac
    21061 gattatgtgc tgaaggtacc gcagggcgac tgtgaggacg aactgcttgc gcgactgcag
    21121 cttgttgatc gcgaacgcag cgcgggccgg gatatgggag cccgtgcccg tgcctgggca
    21181 cgcgatgagt tctcggccat tcactacgcc aaggggcttg acgcgttgat cccggagttc
    21241 atagaaagtg aaccctacat tgccgctgcc agggcgctgg gccgcgagct ggggcggatg
    21301 gggatccccg gcagcagtcc ctcggcaggc aggctggctg gcatgctcga ccgcatgttc
    21361 agcctctgat accgctgcct atcacgaagc tccattcatt caggaaatca gcatgaaatc
    21421 tgcagtcatc accggtatct ctggccagga cggcgcttac ttggcgcagc tgctgcttga
    21481 gaagggctac aaggtctacg gtacctaccg ccgtaccagc tcggtcaact tctggcgtat
    21541 cgaagagctt ggcatcgaca agcatccgaa cctgcatctg gtcgagcatg acctgcagga
    21601 catcggctcc tcgatccgcc tgttgaagga cagtgaagcg accgaggtct acaacctggc
    21661 cgcgcagagc ttcgttggcg tgtctttcga tcagccggtg ctgaccgcgc agatcactgc
    21721 gctgggcgcg ctgaacctgc tcgaggcgat tcgtgcggtc aacccggaga tccgcttcta
    21781 ccaggcatcg acctcggaga tgttcggcct ggtgcagcag gtgccgcaga ccgagcagac
    21841 ccagttctac ccgcgcagcc cgtacggcgt cgcaaagctc tacgcgcact ggatcacggt
    21901 gaactaccgc gagtcctacg ggatcttcgg tgccagtggc atcctgttca accacgaatc
    21961 gccgctgcgt ggccgcgagt tcgtgacccg caagatcacc gactcggtcg ccaagatcaa
    22021 gctgggcaag ctggacgtgc tggagctggg caacctcgat gccaagcgcg attggggctt
    22081 tgccaaggag tacgtcgagg gcatgtggcg catgctgcag gtcgacgtgc cggataccta
    22141 cgtgctggcc accaatcgca ccgagaccgt gcgtgacttc gtcagcatgg cgttcaaggc
    22201 catcggtgtg gacctggcct ggaacggcag cggcctggac gaaaccggta cctgcaaggc
    22261 aacgggcaag gtcctggtga agatcaatcc gaagttccac cgtccggcag aagtcgatct
    22321 gctgatcggc aatccggaaa aggccaagcg tgaactgggc tgggagccgt cgaccacgct
    22381 cgaagagctg tgcgaaatga tggtcaacgc cgacctgcgc cgcaatgagg cgggcgcctc
    22441 gttctgatcc gcgacactgc tggtcttgtc gttcgatcgt ggcaggcagg cgccacagcg
    22501 cctgtcgtgc cacgctccct ccacagcagt tgaaggtccg ggaacacttg catgaagccc
    22561 atcgcagcaa tcactggaat cgaagggttc accggccctt acatggccgc ggagctggag
    22621 cggctcggat accaggtgaa ggggatcagc cgcaatcccg taccagggcg agacaacgag
    22681 gtcgccgaca ttctcgaccc tgatgcgatc ggggccgtga tgaagcgctt gcagccacag
    22741 gtgattgtcc atctggcagg cgtttcgcat gttgcccacc gcgacgtttc tgcgatctac
    22801 caggccaaca tcatgggcac gcgcaacctg ctggaagcgc tgacggagct ggaggccgtg
    22861 ccgaagagcg tgctgctgcc cagcagtgcc cacgtttatg gtgcctcctc cagttctctg
    22921 ctggaggaga cttcgccgat ggcgccgttc aacgattacg ccatcagcaa ggtggccggt
    22981 gagcacgttg ccaggctgta catggaccgg ttgccgatca tgctgacccg tccgttcaac
    23041 tatacaggcg tggggcaatc gccttcgttc ttcgttgcca aggtcatcga ccacgcgcgt
    23101 cgtggcagta ccgacatgcg cctgggcaac ctggatgtcg agcgtgactt caccgatgtg
    23161 cgcgatctgg ttcgctgcta cggcatgctg atcgagcagg ggtgccgggg ccaggtggtc
    23221 aacatctgca gcggcgttcc aacctcgctg cgccgcgtca tcgaaaccgt cagcgagatt
    23281 tccgggctgg agtttgcgat tgaaagcgat tcggagctga tccgcagcca tgacgttgat
    23341 cgccttgctg gttccaatgc cggcttcacc gcactgaccg gggggattgc gttccggcca
    23401 ttgcgtgaaa ccctgcagtg gatgcttgac gcctgatcca gctgcgcatc gggccaccgg
    23461 caggcggcgt tgggcctcct gcaaatgaaa acgccccgaa gcaaatggtg ctgccggggc
    23521 gttcttttca ggcgatcagt acgattacgg ggtggcagcc gcgatcggtg cgcccttgtc
    23581 gtcgcacagg cccttgccgt cggcgcagcg tgcgaacggg cccagaacca ggaccggctg
    23641 ctggaagttg tagccgaacc atgccacgcc ttcctgcagc agctcgatcc gcaccttgtg
    23701 accggcagcg aagtcacctg gaacgaccgc agttacttca gtctcggcgt gcggctgcac
    23761 gtcgccagtc atgggaacgc gagcttcctc gccacgggcc ggctcggcag tgcccggcgc
    23821 cgggtcgagc agctgaacca cgccaacggt aaccgggttg gtgcccgaag tcggccaggc
    23881 agcagtgccc ttgttgctga tcttaagctt gacggtcagg gtatcgtcag cggcgttgta
    23941 cgcggtgctg ccgacctgct cgatgttgct tgagacctgt tcgtgagtca gctgcgggtt
    24001 ctccttcacc gccgcaggcg ctgcgccctc agccgccgca ggcgcctggc tgtcattcga
    24061 gcaggccgtc agcatcagcg acgaggcgag aatcaggggc agcgcaatct ttgaaatgtt
    24121 ggtggtcatg gggtgctcta ggagctgggt tgtcggggtc gaccgacccg cttccagcgg
    24181 gttggcagga tcttgggtgg ctgggaacaa ctgcgggata atatcccgcg ggcgccccga
    24241 acgccacggc ccggcgggcc aggcggtggc gcgaagccgc gcacgccctt gggctccgtc
    24301 cagatgcctt aaactaggcc cggctgtcgg tttatccagc cagcacctgt aagattgacc
    24361 gctttccgga ggtcgccagg acggcgtggg tcgtcctgct catcgaccgc ccggtccggg
    24421 ggttcccaca gaacctcacg ggaccatgac acacgccgca atctggacgc ggcccagcct
    24481 tgctgaacgg agaagagtta catatggcgg tatcaggcag ttcccgcgcg gtgggcgggg
    24541 tgggggagga aaaccgggat tccctgattt ctccctatac gttgacggtc ctttgggtgt
    24601 cgctggcaag cgtgcttgcg atcgcgctga tttgcctgcg caggttcgat gttccgctgc
    24661 tgctgctgct ggccacgctg ctcacggcgg caatgctggc ggtattccgg gtacgcatcc
    24721 gctggtccct gcccaagctc ggaattggct tcgtcgccat cgccgcgctg gcgctgttcc
    24781 tgcgatcgga tctggatccg cacctgaagg ccggtcagga ccagggcctg tacaccaaca
    24841 tgtcagcaca gctgctgcga gccaaggcgc tggactacac cgatgaattc cgcgcctcgc
    24901 tgagcggcga ggagctgcgg atgtatgaca gcgcgccgat ggccgctgtc gatctggtcg
    24961 atccggtgcg ctcgcgctat gtggttgcgt tctacccact gcacccggcg tggatggcaa
    25021 tgtccacctg ggcgttcgga cagaattacc atacggcatc gctgctgctg tttgccgcgc
    25081 tgggaatagc cggtggctac tacctggcgc tgctgctgtt tggcagtcgg cgcgcggcag
    25141 ggctggctgc cgccttcctc gcgttgaatc ccgcgctggt tttcttcgcc aagtttccgg
    25201 tcaccgagat ggtggcgttc gcattcacgg tcaacggctt cctgttcttc gccaaggcat
    25261 gtttcgaggt tgcacggggc aagcgctggt tgttcctgct gattgcggtc ctgtgcttca
    25321 acgggttgtt ctatacccgc atgcagttct tcctgtacat cccgttcatg ggcctgctgt
    25381 tcgcctatgc gctgattgcc atccgccagc cgtggagccg tcgcgtggtg atgatggtgt
    25441 tcccggcatc gctggtgatc accttcctgg tgagcatggc gttctaccgc tactaccagc
    25501 cgatcctcta tggagggatg gtcgaaggcc acctggacaa gctgaagaag cttgccgcac
    25561 tgatggccgc tggcctgggg ctggtcgtac tgggcctgct tgcctacgtg gtggcgcgcc
    25621 gccccaccct ggccgtgctg gaacgcctca atgaccagat cctgcgctgg tccggcaagg
    25681 tcacttggct gcttccgctg gcactgctgg cctcgattcc cagcgtcgtt gccctgtacc
    25741 agaccggctc gctggcgcca ttcccgtgga cggtgccggt cggcactgat cctttcctgg
    25801 tccgctacca cgccatctac cgcctggcgc agatgctgtc gccgctgggc gtagcgctgc
    25861 tgctgctgct gccggcgttc cggatcgcct ggtccggcgc agccaagttc gggctgctgt
    25921 tcctggtgct ggtctgggcg gccgtgctga cccagcccgc catcccgtac ctgtactact
    25981 acggccgtta cctggctggc gacatgctgc cgtactcgct gatcctcacc gccggcgtga
    26041 tcgcctacct gtgggacggc cgctggcgcc gcctggccat cgcgattacc gcgttccagt
    26101 gcttgttctt cctggtgttc tccattgcgc agtacaacca cgacgaaggc gaagatcctc
    26161 ggttcttcga gcgtattgcc gagcttgtca gccccaatga catcatcatc gcctccgggc
    26221 tggatgatgc gcagctggtc ggcctgcggg tcacctataa cctgaacgtg ttttccatca
    26281 ccggccgtgg ctctgttcca ctgcctttcg acaccggtac ctggcatcgc ctggaagcca
    26341 acgcgcacca gaaggggggg cgcctgtacc tgttgaccaa ccagcggccg agcgcgctgc
    26401 aggagcaact ggtcgagcgt gtcccgttcc gccaggggta catgagcaac agcgagcacg
    26461 ctcaggccgg gaacatgttc cagcctacat cgcgttcgcg gttgctgctg ccgttgcgct
    26521 tcaagcaggc cgaagtggaa atcaatctgt atcggatcga taccagcacc ttcgaccgtg
    26581 tcgccaacgc gagctgcacg gacgagctcg gcctggccac cgacggtgca atcctggtca
    26641 agggcctgaa cggtttcagc agccccgaga cgcatggccg ctggaccgat ggcaagcgtg
    26701 cgagctacac ctgcacgctg cctgaggggc attcggccag caccgtggaa atccaggcca
    26761 ccgcctacct gccaaacggg cgcaagcagc gtgtcggtgt atcggtcaac ggcggtgcac
    26821 cccagcagtt cgagttcgca ccgggtaacg acacccagcg gctgcagatt ccagtgggca
    26881 acaccgacaa gcgatcgctg acggtggact tcgacctgcc ggacgccatt tcgccacagc
    26941 aggcacaaag cgcgaacgac gcgcgcgtgc tcggcatcag catcagtgag atcgagatca
    27001 aagaatgaac aagcaactga ttgaacgcct ggattccaag acggccacga tcggcatcgt
    27061 cgggctgggc tacgtgggcc tgccgctgct gctgcgctac agcgaagtcg gctacaaggt
    27121 cgtcggattc gatatcgatc cgtccaagat cgagatgctg tcttccgggc gcagctacat
    27181 cgagcacatc gattcggcgg acatcgccaa ggcgttcgcc agtggcgccg aagcgaccac
    27241 cgactacgcg cgggcgaagg acgtcgatgc cctgatcatc tgcgtaccga ccccgctgac
    27301 caagttccgt gagccggatc tgagcttcgt ggtcggtacg gtcgacgcgc tgctgccgca
    27361 cctgcgcgcc ggccagatca tgtcgctgga aagcaccacc tacccgggca ccaccgatga
    27421 ggaactcaag ccccgcgtag agtcgcaggg cttcaccatc ggcgaagact acttcctggt
    27481 gttctcgccc gaacgcgaag atccgggcaa tccgaacttc agcacgcgct cgatccccaa
    27541 ggtctgcggc ggcgtgaccg cgccgtgcct cgatgtcggc ctggcgctgt acggccaggt
    27601 gatcgaccgc gtggttccgg tcagttcggc gcgtgccgcg gaaatgacca agctgctgga
    27661 gaacatccac cgcgccgtca acatcggcct ggtcaatgag atgaaggtgg ccgccgatcg
    27721 catgggcatc gacatccatg aggtcatccg tgctgctgcg accaagccgt tcggcttcgt
    27781 cgcctactac ccgggtccgg gccttggcgg gcactgcatc ccgatcgatc cgttctacct
    27841 gacctggaag gcgcgcgagt acggcgtgca tacgcgcttc atcgagctgg cgggcgaaat
    27901 caattcgtcg atgcccgact acgtgatttc caagactctg ctggcgctga acctgcgccg
    27961 caaggcgatc aacggcagcc gcgtgctggt gctgggtatc gcctacaaga agaacgtgga
    28021 cgacatgcgt gagtcgccgt cggtggtgtt gatggagaag cttcgcgatc tcggtgcgga
    28081 agtgtcctac agcgatccgc atattccggt gttcccgaag atgcgcgagc accagttcga
    28141 gctgtccagc gtggacatca ccgccgacac cctcagcagc tacgactgcg tgctgctggc
    28201 gaccgaccac gacaagttcg actatgcgct gatcaagcag cacgcgtcgg tgctggtgga
    28261 ctcccgtggc cgcttcctgg aaagcgccga taacatcgta aaggcctgaa tcatgcgcgt
    28321 atttaccccg cctgtgctgg acaggaagat ccggttcgcc ctggtcggct gtggccgcat
    28381 tgcccagtcc cacatcaatg ccatgcgcca gcatgctgat cgcatcgagt tgaccgatgt
    28441 ctgcgacgtc gacccggccg cgctgcagaa ggccgtcgaa gacaccggcg ccgttggcca
    28501 ccgcaagctg agcgacatgc tggccagcac gacggccgac atcgtcgtgc tgaccacccc
    28561 cagcggcctg catccggagc aggcagtgga aatcgctgcc gccggcaagc atgtgatgac
    28621 cgaaaagccg atggctaccc gcctgcagga cggcgtgcgg atggtcaagg cgtgcgacga
    28681 agccggcgtg cgcctgttcg tggtgaagca gaaccgccgt aatgccacgc tgcagctgct
    28741 caagcgggcg atggagaagc gccgcttcgg ccgcctctac atgatcaaca tcaacgtgtt
    28801 ctggacccgt ccgcagtcgt actacgacag tgcatcgtgg cgcgggacgt gggagttcga
    28861 tggcggcgcc ttcatgaacc aggccagcca ctacgtggac ctgctggaat ggctgggcgg
    28921 gccgctggaa agcgtgcagg cctataccgc aacccttgcc cgcaacatcg aggtcgagga
    28981 ttccggcgta atcggcctgc gctggcgctc cggtgcgctg ggttcggtca acgtgaccat
    29041 gctgacctac ccgcagaacc tggagggcag catcaccatc atcggtgaga agggcaccgt
    29101 tcgcatcggt ggcgtggcgg tgaacgagat ccagcagtgg cagttcgccg aatccgatcc
    29161 ggacgacgaa gccgtggcca gcgccagcta cgaaaccacc tcggtctacg gctttggcca
    29221 tccgctgtac tacgacaacg tgatccaggt gctgcgcggc gaagccgagc cggagaccga
    29281 cggccgcgaa gggctgaagt cgctggaagt cctgattgct gcctacatgt ccgcgcgcga
    29341 tggcaagcgg gtcgcactgc cactggagta ctgacatggc cctgttcatc catccaaccg
    29401 cgatcgttga tgagggtgcg cgcatcggcg atggcagccg cgtctggcat tgggcgcatg
    29461 tgtccgctgg cgcgcagatc ggcaacgact gctcgttcgg ccagaacgtg tacgtcggta
    29521 acgacgtggt gatcggcaac aacgtcaaga tccagaacaa cgtgtcggtc tatgacgcgg
    29581 tgcggctgga ggatgacgtg ttctgtggcc ccagcatggt cttcaccaac gtctacaacc
    29641 cccgctcggc ggtcaaccgc aaggccgagt accggcagac cctggtgcgc cggggagcca
    29701 cgctcggcgc caactgcacg atcgtctgtg gcgttaccgt gggcgagcac gccttcgtcg
    29761 gtgccggagc ggtggtcaac cgcgatgttg cgccgttcgc cctgatggtc ggggttccgg
    29821 ctcgccgggc gggctggatg tgcctgtgcg gcgagcggct gccagggacc ggaacggtga
    29881 cgtgcgcgca ctgcgaccgc cgttacctgg tcgacgatgc gtcctgcgcg ttgctcgatg
    29941 cctgagcgta agtgcgcggc tgcctgagcc tgcctttttc taggagtgac atggaaattc
    30001 agtttatcga cctggccgcg cagtaccgcg ccctgaaaca ggatgtggac gcgcgcatcg
    30061 ccaaggtgct cgagcacggg cgctatatca tggggcccga ggttcgcgag atggagcagg
    30121 cgctggaagc ccgcaccggt gcgccgcact gcatctcggt tgcttcgggc actgaagccc
    30181 tgctgatcgc gctgatggcg atcggcgtca gcgcaggcga tgaggtcatc accacctcgt
    30241 tcaccttcgt ggcaaccgct gaagtgattg ccctgctcgg cgcggttccg gtgttcgtcg
    30301 atgtcgagcc ggacacctgc aacatcgatg cgaacctgat cgaggcggcc atcaccccgc
    30361 gtaccaaggc catcatcccg gtgtcgctgt acggccaggt tgcggacatg gatgcgatca
    30421 acgcgatcgc cgcccgtcat cccggcatca ccgtgatcga ggatgcggcg cagagtttcg
    30481 gtgcgaccta ccgcggcaag gcaagctgca acgtgtcgcg catcgcgtgc accagcttct
    30541 tccccagcaa gccgctgggc tgctacggcg acggcggtgc gatcttcact gacgacgccg
    30601 cgctggcaaa ggcgatggcc gagatccgtg tgcatggcca ggagcgccgc tactaccaca
    30661 cccgcgtggg cgtgggtggg cgcatggata ccctgcagtg cgcgatcgtg ctggccaagc
    30721 tcggccggtt cgacttcgaa tgcgagcgcc gccagcacgt ggctggacgc tacctgcagg
    30781 cgttggctgg cctgcagggc tgcgagttgc cgagcctgcg cgaaggcaac agttcggtct
    30841 gggggcagtt caccgtgcag gtcgatgatc gcgccaaggt ggttgagcgc ctcactgcgg
    30901 cgaacgtgcc gaccgctgtg cactacccgg tgcccctgca tcagcagcct gcgtaccgcg
    30961 accgctgccg catcgcgtcc tctctggcga actccgagcg ggtggcgcag cgcgtcatga
    31021 gcctgccgat gtccgccgac ctcgatgaga cgcaacagga ttacatcatc gagcagctgc
    31081 gcgcggccct ccgcgactga tcccgaccat cgctccactt tcctgcgaga cccgcgtatg
    31141 taccagaaca accgtatcag tgtcgtggtg ccggcacaca acgaagagac gcagatcaag
    31201 cgcgtcatcg acaccatgcc tgactatgtc gactacatcg tcatcgtcaa cgacaccagt
    31261 acggaccgca cttccgacgt ggtccgcgcc acgccggaat acgccagcgg gcgcgtcgtg
    31321 ctgatcgagc acgaagtgaa ccagggcgtc ggcggggcaa tcgcaaccgg ctacaagtgg
    31381 agccgcgaca acggtatcga cgtgtcggtg gtgatggcgg gcgacggcca gatgaatccg
    31441 ctcgacatgc cggccattct cgcgccggtg atcaacgatg tggccgacta ctccaagggt
    31501 aatcgcctgg tgactggcga agccttcaag cgcatcccga agatccgctt cttcggcaac
    31561 tcggccctgt ccctgctgac caagatcgca tccggctact ggggcgttgc cgattcgcag
    31621 acaggttata cggcgatcaa cgccaaggcg ctggctgcga tcgactggga ccacatgtac
    31681 aagcgctatg gccagccgaa cgatctgctg gtgcggctga acatcgccga gatgcgcgtg
    31741 gtcgacgtgc cggtcgagcc ggtctacaac gtcggcgaaa aatccggtat ccgcgtgcgc
    31801 aaggtgctct tcagcatcgg ctggctgatc gtgcgcctgt tcttctaccg gttgaaggaa
    31861 aagtacatca tccgcgactt ccatccgctg gtgttcttct atgccttcgg cggtgcgact
    31921 gcgctggttg gcctgctgtt cctggtgcgt accatcctgc tgtggttcac gcagggcagc
    31981 atgccggaga tgtcgttcct ggtgacgctg ttctccttca gcatctcctt caatgccatc
    32041 ggctttgcgt tctggttcga ttaccaggcc aaccgccatc tgaatccgcc catcacccat
    32101 cgtgacgtga cccatcgcca ggcgccggat ccgatcgacc cgtgagcatc tcgccgtccg
    32161 ccctgttgaa gaccctcgcg agcaatctgt cctggacggc cgcgagtctg gtgatcctgg
    32221 ccgtcagcgg gatcgccatc aacctgatga tcgccggctt ccgcagcgcc agcgatctgg
    32281 gtgttttcaa ccaggcgtac gcggtgtacg tggtcgcatc gcagttgacc gtgttcggta
    32341 tccacaactc gatcatgcgc aacgccgccc attacagcgg tgatgccgag gaagggcgca
    32401 gcctggccgg tagcgggctg ctgctttcgg cgcttgccgg cgtagtcggc gccgcgctgc
    32461 tggtgctggc tgcaccggcc ctgggcaagt ggttcgacag cccggacact gccctgggcg
    32521 tgcgcaacgt ggcgtatggg ctgctgctgt tcccgttgag caagaccctg ctgggcctgc
    32581 tcaacggcct gcagttgatg aaggccttcg ctgtcctgca atcgctgcgc tatctggtcg
    32641 tgatggcctg ggtggcggtg gtctcgatga cttcggccag tatcgacaag gtgttgtact
    32701 gcttcctcgt cgccgaggtc gtcaccaccg tagccgcgct gggctatctg tggtcgcgcc
    32761 ggatgctgca gggcatgcgc gtgcggcggg tatggatcgg gcgccacgcc agcttcggtg
    32821 ccaggagcct gttgtccaat acgttcgtcg agctcaactc tcgcgtggac gtcatcctga
    32881 tcggcttctt cctgaccgac cgcgcggctg gcatctacag cttcggcgcg atcctgatcg
    32941 atgggctcta ccaggtctgg cacctgatcc gggtcaacct gaacccgatc ctggtgaacg
    33001 ccagccgcga ccgtgactgg tcgacctgtc gcatgctgct caacaaggct ctacgctacc
    33061 tgtatccgtt ggcggttctg ctggccttgg gcgtggtgtt cgcgtactgg ttcaccatca
    33121 cctacgtgat gagcggcaag gggctggaag agggcatgct gccgctgatc atcctgctcc
    33181 tcgggctgac ttcggtggcg ccgttcattc ccttcgacca gctgccgctg ctgggcggct
    33241 ccccggggct gcagaccctg cagcagctgt cggtggtgat cgtcaatgca atcctgaatg
    33301 ttatattcat tccgtggttg gggatcgagg gtgctgcgct tggaaccgca ctgagctacg
    33361 tcttcggcgt gctcgtgttg atgttgatgg tgcggcgcct gtactcctgg aatctaatta
    33421 caaatcgtat cgaggcataa tcatgtgcgg aattttcggt ctggtgctcc gcaaggatgc
    33481 cgctttctcc cactccagac tgcagtcgac gctttctgaa cttttcaagc tgtccgagac
    33541 gcgcggcaag gaatcatcgg gcatccatgc ctatgttccc gaccagcgcg catcgtgggg
    33601 gctgaagtcg gctgatcgcg cgaccgacct gatgaagtcg ccggagtacg cgtcgatcat
    33661 gcaggcgctg gccgctgcct tcgaggctga gaaggtcggt gcgtcgctgg ccgtgatcgc
    33721 acattcgcgc ctggtcacca acggtacctc ggcgctgcca cagaacaacc agccggtcag
    33781 ccgtgaaggc gtgacgctga tccacaacgg tatcgtcgtc aacgtggatg agctgtgggc
    33841 gtcccacccg gagctgcagc gccacgccga agttgacacc gagttcatgg gcgcgttcct
    33901 cgcccagcat ggcggtgcct ccacaccggc caaggccact gccgatgttt tcgccctgct
    33961 caagggcgct gcgtcgatcg cctgggtgca tggacagacc gatcgcctgg tgctggcaac
    34021 caacaccggc gacctgtatt tccatctgga cgaacgccag ggcgtgctgg tgtttgcctc
    34081 cgagcagtac atcctggaca acgtggtcaa gcacatccat ggagaagcag cggttcccgc
    34141 tgtacgttgg ctggaaccgc agaccgcgct gggtgtgggc atcaacaacc tcggcacagc
    34201 cgccttccgc ctcgacgagg ccaccgcggc cgcggccgat gctggcgtgc aggtgtaccc
    34261 aaccccggtg agcgcccacc aggccgctcc ggcccgcccc gcaacgccgg tgctggccgt
    34321 tggcagtgcg gacttctcgc tgctgcgcta caacgaagac aatctgaaga agctgcgtcg
    34381 ctgcagccgc tgcatcctgc cggagacctt cccattcatc gccttcgatg gcgaaggcgt
    34441 gtgcaattac tgccgctcct acaagccgcg ctatgcgggc atgcatccgg tcaagaccaa
    34501 gcacgatttc atcgagtcgc tggccggtta ccgccgcggc aatggtcgtc cggacgtgct
    34561 ggtacccttc agcggcggcc gtgacagcag ctatggcctg cacctgatca agcacgagtt
    34621 cggcctgaac ccgatcacct tcacctacga ctggggcatg gtgaccgacc tggcccgtcg
    34681 taatgtggcg cgcatgtgcg gccagctggg agtgcagaac atcctggtct cggcggacat
    34741 caagcagaag cgcgagaatg tccgcaagaa cgtggcggcg tggctgaaga agcccgatct
    34801 gggcatggtc ccgctgttca tggctggcga caagcacttc ttccgcatcg tcaaccagct
    34861 caagcggcag accggtattt cgctggacct gtggagcgcc aatccgctgg agaacaccga
    34921 tttcaagtcg ggcttctgcg gtgtcagccc ggacttcgac aagagccgcg tcgattatct
    34981 gtcgatgagc cgcaagctgc acctggcggc ctactacggc agtcgcttcc tgaccaatcc
    35041 tggctacatc aatacgtcgt tgctggacac gatgggcgct ttcctcgcct actacgttga
    35101 accacgccgc gacttctact tcatcttcga ccacatgatc tgggaagaga acgaagtcaa
    35161 cgacgtgctg ctcaaccagt atgactggga gctggcaccg gacacggaca gtacctggcg
    35221 catcggcgac ggcaccgcgc cgttctacaa ctacatctac atgaccgcgc gtggattctc
    35281 ggagttcgac acgttccgca gcaatcagat ccgcgaaggg atgatgaccc gcgaggaggc
    35341 gatctcggcg gtgtacaccg agaatcgccc gcgtccgcag tcgatcaagt ggtacctcga
    35401 taccatcggc atcgatttcg acagcgcgat ccgccgcatc aacgaaatgg atgtaatggg
    35461 cctgcaccgc tgagaaccag caggtgcagc gaaacggtcg gctaccgcat cagttgcggt
    35521 agccgatcac gcgggccgga ttgccaacca ccacggccca gtcttcgacg tccttggtga
    35581 ccacgcagca tgcgccgatc accgcaccgg tgccaatccg gttgaccgag ggcaggatca
    35641 cggcacgcgc gccaagccag gcatcgtcgc cgatggtcag gccggtgaaa tccaccggtt
    35701 gctccttctt gagcgctcgt gtcttgatcc gatggccatg ggtggcaatg aatacgcctt
    35761 cggagatcca gacgtcattg ccgatcttca atccgccgga gtagtccagc tcgcagtcgt
    35821 gctcaacgcc tacgttgcgg cccatgctga agtgcgcatg ccgggtgctg tgcggagaca
    35881 ccagcatggc ccgataggaa acgtacgaat tggcgccgat atcgaagaag cggcgcagca
    35941 cgaacatctt gcattgcacc agccccggtg cgtcgaacag gaaggaaccc agcaggtgct
    36001 ggacgaagcg tcgtagatat tccttcagca ttgcatatct cccaatacag gtctgttgat
    36061 catcgaccgg ggccggtttc caggcaggac cgcgctcagt tggcgcggcc gtactggtct
    36121 tcgaagcgaa cgatgtcgtc ttcgccaaga tagctgcccg actgcacttc gatcagctcc
    36181 agcggcagct tgcctgggtt tttcaggcga tgggtaacgc ccagcggaat gtaggtgctc
    36241 tggttctccg tcaacaggat cacatcgtcg ccgcgggtga cttcggcggt gccgctcacc
    36301 acgatccagt gttcggcgcg atgatggtgc atctgcaggc tcagcgtcgc gccgggcttg
    36361 acggtgatgc gcttgacctg gaagcgggca ccgttgtcga tcgaatcgta cgcgccccag
    36421 ggacggtaga ccttgcggtg cgcagctgct tcgctgcggc cgtcgcgctt gatctggcca
    36481 acgatcgcct tgacgtcctg cacgcggtcc ttgtggccga cgaacacggc atcgtccgtt
    36541 tccactacaa ccacatcctc caggccgacc atcgcgatca ggcggttgcc ataggcatag
    36601 ctgttgcggc aatccagggc gatgacatcg ccgtggcagg cattgccatc ggcgtccttg
    36661 tcggacacgt cccacagcgc ggaccacgag ccgacgtcgt tccagccggc atccagggcg
    36721 accacggcgg catcgccggt cttttccatc accgcgtagt cgatcgaatc gcttgggctg
    36781 gcggcgaacg cgtcggcgtc caggcgcacg aagtcgctgt cgcgggctgc cttggccagg
    36841 gcctcgcggc atgcggccag gatcgccggc tgcagcttct ccagctcctg caggtagcgt
    36901 gacgccttga acaggaacat gccgctgttc cagaaatact cgcccgaggc cacgtaacct
    36961 tcggcggtgg ccaggtccgg cttctccacg aaacgttcga caccacgcgc gccttcgccg
    37021 gcggcggcct tgatatagcc atagccggtt tccggcgccg tcggcacgat gccgaaggtg
    37081 accagcttgc cggcgtcggc agccaccgcg gcctgggcca cagcggcatg gaaggctttc
    37141 tcgttgcgga ccacgtggtc cgagggcagg accagcagca aagcgtcatc gttgccagcc
    37201 aggacctgca gggcggcgat ggcgatggcc ggcgcggtgt tgcggccaac cggctccagg
    37261 atcagcgcct gcggctggac attgcattcg cgcagctgtt cggccgccat gaagcggtgt
    37321 tcctggttgg caaccacgat cggcgctttg cccgcaatcg cggcgacgcg cttccaggtc
    37381 gcctgcagca tggtgtcgtc gccgaccagc ggcaggaact gcttgggata ggcttcgcgc
    37441 gacagcggcc acagccgcgt gccggaacca ccggagagaa tgacggggac gatggggagc
    37501 atggagtcct tccttactta atgatgagcc gggctgccgc cgatcagggc ggtaagttcc
    37561 tgggtgcgtc gcgccagcag cacggcgtcg cctcgggttt caatgttcag gcgcagcagt
    37621 ggttcggtgt tcgagctgcg cagattgaag cgccagtcgg cgaactcggc gctgacgccg
    37681 tcggtatgat ccagcagcgg tgcgtcggcc tggtaatggg ccaggacgtg ggccaccgtc
    37741 gccttggcgt cttccacgcg gaagttgatc tcgccactgc aggggaaggc cttcacccgg
    37801 tccgcgacca gttcgcccag cggagtaccg gtctgcgaga ccagtgcggc aatcagcaac
    37861 cagggaatca tgccggagtc gcagtaggcg aaatcgcgga aatagtggtg cgcactcatc
    37921 tcgccgccgt agatcgcatc ttcggcgcgc atgcgttcct tgatgaaggc atggccggtc
    37981 ttgctcatga tcggcacgcc accggcctgc tgtacctgct cgatggtgtt ccaggtcagg
    38041 cgcgggtcat ggatgatctt gccgcccggc tggcgcgcga gcagcgcggt ggccagcagg
    38101 ccgaccaggt agtagccctc gatgaagttg ccatcggcgt cgaagaagaa gcagcggtcg
    38161 aagtcgccat cccaggcgat gccgaagtcg gcaccgtgtt cgcgcaccgc gtcgcgggtg
    38221 gccgcgcggt tttccggcag cagcgggttg ggaatgccgt tggggaagct gccgtcggcc
    38281 tcatgctgga tgcggatgaa ttcgaagggc aggtgcgggg ccagtgcgtc gatcaccagg
    38341 ccggcaccac cgttgccagc gttggtgacg atcttcagcg gcttcaggct ggcgacgtcg
    38401 atgtagccga gcaggtgctg gatgtaggcc gatttgtcgg cgtcctggct gaccgtgccg
    38461 tggccgttgc ccaacggcgc gtcggaggcc gcgaagtcgc ggatgtcgaa caggccggta
    38521 tcgccgctga tcggcttgga ctgttcgcgt accagcttca tgccgttgta atccatcgga
    38581 ttgtggctgg cagtaaccat gatgccgccg gcagcctggc ggtggaacgt ctggaagtac
    38641 acttcctcgg tgccgcacag gccgatgtcg atgacatcgc ggccacttgc cgtgaggcct
    38701 tcgatcgcgg cctgcagcag ctccgggctg ctcaggcgga tgtcatggcc gacgatgacc
    38761 ggtcctggcc ccagcaatgc cgccgtgcct gcgccgatgc gcttggccag gttggcgtcg
    38821 agttcatccg gaacccgacc acggatgtca taggccttga aacacgggag cgtcatcaat
    38881 gcggtcctta ctggggtgac cgccgattat agcgacaggc tccgtcgggg cgggtaatcc
    38941 tgtccagcat ccgtgccggc caaaacaatc ggaaaagacc gcataacccg ttgattatgc
    39001 ggtcccttgc ttctgccggg ctcagcccag cgccgcttcc agctctggca ggatcgtgaa
    39061 cagatccccc accaggccga tgtcggcgat ctcgaagatc ggcgcgtcac cgtccttgtt
    39121 gatcgccacg atggtgccgg cgtccttgat gccggtcagg tgctggatgg caccgctgat
    39181 gccgacggcc acgtacagct ccggcgcgat gatcttgccg gtctggccga cctgcaggtc
    39241 gctgggcaca tagccggcat cgaccgcggc gcgcgaagca ccgacggcgg cgccgagcct
    39301 gtcggccaac tggaagatga ccttgaagtt ctcctccgag ccgacgccac ggccaccgga
    39361 gaccacgcgc ttggcgctct gcaggtccgg gcggtcgctg gcaccggcgg ccaggccgac
    39421 gaagcgggtg tgggccggca gcggggcgtc gacgctggcc gcttcgatgg cggcactgcc
    39481 accctgggcg gcttccggcc acgaggcggc acgcacggtg gcgaccacga cctggtcggc
    39541 cggggcttcg acggtgatga ttgcgttgcc ggcgtagatc gggcgcttga aggtgtggct
    39601 gccttcgacg ctcatcaggt cggagacctg gttgacgcca agcagggccg ccacgcacgg
    39661 catcaggtcc ttgccgaagg tggtcgacgg gccgaacacg tgggtgtagc ccttggccag
    39721 ctgggcgatc tgcggtgcca gcacctgggc gatggcctgc gcgttggcgg cgttggccac
    39781 ggtcaggacc ttggcgacgc cggcgatctt cgccgcttcc gcagcgacgg cggccggatc
    39841 ggcggccagc accagcacgt cgatgctggc gccgccgatg gcggcggcgg cgctgacggt
    39901 cttggcggtg gcggcattga gcttgccgtc gtggtgctcg gcgatgacga gaatcttgct
    39961 cattacagca gccccttctg cttgagtgcg gcaaccagtt cggctgcgtc cttgaccatc
    40021 acacccttgc tgcgcttgga cggcgcggcg tagtgggtgg tcttgaaggt gtcggcggct
    40081 tcaacgccga ggtcggccag ctgcagggtc tccagcggct tggccttggc cttcatgatg
    40141 tccggcagct tgatgaagcg cggttcgttc aggcgcaggt cggtggtgac caccgccggc
    40201 aggtccactt cgagggtttc caggccggca tcgacctcgc gggtcaccgt ggccttgccg
    40261 tcagcgatct caagcttgct ggcgaaggtc gcctgcggac ggccccagag cgtggccagc
    40321 atctggccgg tctggttggc gtcgtcgtcg atcgcctgct tgcccaggat caccaggtcc
    40381 ggctgttcct tctcgatcag cttgagcagg gtgcgggcgg cggtcagcgg ctggatggcc
    40441 tggtcggtga ccacatggat ggcacgattg gcgcccatgg ccaggccgtt gcgcaggtgc
    40501 gcctgggcgt cggccggtgc gatggtcgca accacgactt cgctggcgat gcccttgtcg
    40561 cgcaggcgca gggcttcttc cagggcgatt tcatcgaagg gattggggga cagcttgacg
    40621 ccgtcggtga ccacgccgga accgtccggc ttgacctgaa tgcggacgtt gtagtccacc
    40681 acgcgcttgt acgcgacgag gattttcatc tggtacgggg tccttgtagt gccggccgct
    40741 ggccggctca catttgctgg gggaacatcc ggtcctgcaa cagcaaccgg ttcgggggtg
    40801 ggaccccgat tctagcgggt ggcggggcac catgcgaatg cgtatggctt tgttgcgatg
    40861 cggcattccg ggcggtgtcc acctgctccg ttcatggccg acaggcagtc gtgaaggagc
    40921 cgccgatgta tcctctcccg ctgccggaag gccccagggc cgaggtgaaa tctgaacagg
    40981 agaacaggta gtgcccacat ggcttgtcac cggcggcgcc ggattcatcg gcggcaactt
    41041 cgtgctggaa gcggtcgcac gtggcatcaa ggtcatcaat cttgatgccc tgacctacgc
    41101 cggcaacctg aagaccctgt ccagcctgga cagcgacgcc aaccacgtct tcgtgcaggg
    41161 tgatatcggt gatcgcgacc tggttgcccg cctgctggcc gagcaccggc ccgatgcggt
    41221 gctcaacttc gccgccgaaa gccacgtgga tcgttccatc gacggtcccg gcgcattcat
    41281 ccagaccaac gtggtgggca ccctgggcct gctggaagcg gtgcgtgact actggaaggg
    41341 actgccggcc gacgaggccg ctgcattccg cttcctgcac gtgtccaccg acgaggtgta
    41401 tggcacgctg ggcgagactg gcaagttcag tgaaaccacc ccgtatgcgc ccaattcgcc
    41461 gtactcggcg tccaaggccg cgtcggatca cctggtgcgt gcgttccacc acacctacgg
    41521 gctgccggtg ctgaccacca attgctccaa caactacggc ccctaccatt tcccggaaaa
    41581 gctcattccg ctggtgatcg ccaaggcgct ggccggcgaa ccgcttccgg tgtacggcga
    41641 tggcaggcag gtgcgtgact ggctgttcgt caccgatcat tgcgaagcga tccgcacggt
    41701 gctggccaag gggcaggtcg gcgagaccta caacgtcggt ggcaattcgg agaagcagaa
    41761 catcgaagtg gtgcaggcga tctgcgcgct gctcgatgca cgccgcccgc gcgacgatgg
    41821 ccagccgcgc agcagccaga tcacctacgt ggccgaccgt ccggggcacg accgccgcta
    41881 tgcgatcgac gcctccaagc tgaagaacga cctcggctgg gagccggcct acaccttcga
    41941 gcagggcatc accttcactg ttgactggta cctggacaac caggagtggg tgaacggcgt
    42001 gctggatggc agctaccgcc tgcagcgcat tggcacctct gcctgaaccg acggcattga
    42061 acaggaaacc tgcatgacgc aacgcaaagg catcatcctg gccggtggct ccggcacccg
    42121 gctgtatccg atcaccaagg gtgtcagcaa gcagctgctg ccggtgtacg acaagccgat
    42181 gatctactac ccgctcagcg tgctgatgct ggcgggcatc cgtgaagtac tgatcatcaa
    42241 cacgccgcat gagcaggcgc tgttccagca gttgctgggc gacggttcgc agtggggcat
    42301 ggacatccag tacgcagtgc agcccagccc tgatgggctg gcacaggcct atctgattgg
    42361 ccgcgatttc gtggccggca agccgagctg cctggtgctg ggcgacaaca tcttccatgg
    42421 ccacggtcta cgtgaactgc tcaagcgcgc cgacgagcgc gtggacggtt cgaccgtgtt
    42481 cggttactgg gtgaatgacc ccgagcgcta cggcgtggcc gagttcgaca ggggcggcaa
    42541 ggtagtcgat ctggtggaga agccagcaaa cccgcgttcc aactatgcgg ttaccggcct
    42601 ctacttctac gacggcaacg ccagtgacta tgccgccgag ctccggcctt cgtcgcgtgg
    42661 cgagctggaa atcaccgatc tcaacaagcg ctacctggcc gacggcacgc ttcatctgga
    42721 agcactgggc cgcggttatg cctggctcga taccggcacc caccagtcgc tgctggaagc
    42781 ctccaacttc atcgagacca tccagacccg ccagggcctg caggtatgct gcccggagga
    42841 agtggcgttc gggcagggct ggatctcggc cgaacagctg caggcgctgg cggccccgtt
    42901 gatcaagaat ggctacggcc agtacctgaa caagctggca ttgcgtgggg tggttccgtg
    42961 aaagtgattc agacccgcct gccgggatgc gtggtgcttg agccgatggt gttcggtgat
    43021 tcgcgcggtt ttttcttcga aggctggaac gcatcgcgat tcggtgcgct tgggttgccc
    43081 gaccggttcg tgcagagcaa tgtttcgtcc tcgagcaagg gcgtgctgcg tggcctgcac
    43141 taccagtggc cgcgcccgca gggcaagctg gtcagcgtgc tggaaggtga ggtctacgat
    43201 gtagccgtgg acatccgacg cgggtcaccg acgtttggat gctgggaggc agtgctcctg
    43261 agtgccggca acaagcgcca gttctggatt ccggaaggtt tcgcccacgg tttcgcggtg
    43321 ctgtccgaga ctgcgctgtt ccactatctc tgtaccgacg tgtacgtgaa ggaagccgat
    43381 gctgctgtgc gctgggacga cgccgatatc gcggtggact ggccgatcag cgatccgatc
    43441 ctgtcggcca aggatgagga tgcgccgttc ctgaaggata ttgccgaaga ccgattgccg
    43501 gcctatacgc catgaagctg ctggtgttcg gcggcaacgg ccaggtgggc caggaactgc
    43561 tgcgcgcatt ggcgccgctg ggtacggtga ttgcaaccac gcgcagcggc acgctgcccg
    43621 acggccgttc ctgcgaacgg gctgacttca gcgagccagg cagtctgttg gcattgctgg
    43681 atcggctgca gccatcgatc gtggtcaatg cggcggccta tacggcagtg gaccgcgccg
    43741 aacaggacgc aggcgcggcc tttgcggcca atgcactggc accgggcgtg atcgcgcgct
    43801 ggtgtgcgct gcggggtgtg ccgttcgtgc actactccac cgactacgta ttcgatggac
    43861 gcggcacacg gccgtaccgc gaggacgagc ctactgcacc gctgggcgtg tatggcacca
    43921 gcaagcgcga tggcgaggat gcggtgcgtg cagcgggcgg gcgccacctg atcttccgca
    43981 cggcgtgggt gtatgccgca cacggtgcga acttcctgcg caccatgctg cgggtgggcg
    44041 ccgagcgcga ccggctgcgg gtggtggccg atcagatcgg cacgccgacg ccggcggcac
    44101 tgatcgccga tgtcactgcg ctggcattgc agcacccggg cccgttgtcc ggcacctggc
    44161 acctgaccgc cacgggccag accagctggc atggattcgc cgaggcgatc ttcgccgagg
    44221 cgctggcgaa ggggctgctg gaccgtgcgc cggtggtgga ggccattccg agttcggact
    44281 atccgacccc ggcgcagcgt ccggcatggt cggtgctgga caaccgtcgg atccagcagg
    44341 atttcgctat cgagctgccc agttggcagg ccggtctggc gcgggtgatc gacgagatcg
    44401 cgttgcctcg caactgaggc gggaagccgc aatggggcgc gtgcgcgtgc gcagtccgca
    44461 gcccgcgttc tctttgacag ctcccggaaa tagccccacc atcgcgcggc atggtcatcg
    44521 ccgacgagaa ggatttcatg agcagagtgc ccgcagggcc cgcggtacga agcggattgc
    44581 ctccatttgc cgtggccgcc ggcgtcgcgc tggtcgcatt gctggtgcgg cttctttacg
    44641 tccagttttt cagtacgccg atgcccttct gggaccagtg ggacggcgag ggcgcgaccg
    44701 cgctgcaacc ctggctgcat ggaaccctgc aatggagcac attgctggaa ccgcacaatg
    44761 aacaccgcat cttcccgacc cgcctggttg cgttgctgtc gttcttcctg accggacagt
    44821 ggaacaacgt ctacgaagcc cgcatcagcg ccgtggtggc ctgcttcatc ccggcgacgc
    44881 tggtctggca cgcgctgcgt gacagtgacg tcgtgggtgg gcgcaggttg ctggttgcat
    44941 tcgcactgct gatgtcgatc ctgccgttct cctgggagaa cctcctggtg ggcttccaga
    45001 gccagttcta cttcctggtc ctgtccagca tcgtggctgt cggcctggtg gcgcgccatc
    45061 accagagcat ccccgcgttg ttggcggcga tggcgctgag tgtgctggcg gcggtcacca
    45121 tggcctcggg catgctgact gctgtcgcgg tgggcgccac ctgcgtgatc gcctgcctct
    45181 gcctgcccgg caagcgtgcg ccggcgttgt gcgccacagc ggtgctggcg gtgttggcgg
    45241 tgatcgccta tcgggcgatt ccggtcatcg atgccaacgg aatgctgcgc gcgcagtcgc
    45301 ttggagagct gttccttgcg accacccgcg tgctgtcgtg gccggggcgc tcgaacggct
    45361 gggtggccat cgtatggctg ccgggtgtgg tgatgatcac gcgcatgctg ctacgccggc
    45421 aggccacccg gaccgatgtg gcgatggccg gattctgtgc ctggaccgtg ctgcaggcct
    45481 tggcgattgc ctatggtcgc gggcatgaaa tgggttcccc ggcgccgcgc tacaccgatc
    45541 tcttcgtacc cggcgtattc ggcaacgcgt ggttcgcgtt gcagctctgg ggcctgctgc
    45601 cgcgctcggg cctgcgcagc gccgcgcgtg ccgcggtggt catgttcgcg ctggtggtcg
    45661 tgggcgctcc gctcagccag gtgggcaagg acttccgcag gatccgggcg tttgccgcgg
    45721 agagccgcgt gcagcaggac aatgccacgc gctatctggt cacgggtgat ccggccgcgc
    45781 tgcaggtggg cgaacgcgaa ctgccttacc cggatgctgc caagctgaaa gcacaactgg
    45841 atgaccccag gctgcgccgg atcctgccag tcaaactgga agcgagtgca tccgaagggc
    45901 gctgagcgca tccgcagatg aaggcaggtg ggccccgttg accggaatcg ggctcaccgt
    45961 gagggtcacc ggaacgacag gtgcttgtgg ccgaagtagc tggagatcac cggcacggcc
    46021 acgccgacca cgtgggcgat ctccaggcgc agcatgtcta cgcccagcca cggcagcagg
    46081 tggtaggcca gaacggtgga aaccagccag gtctgggcca ccgcgaacag attgaccagc
    46141 acgaagtaga acgccgagtg gtgcagcggc cgggtgctgc cggagaacac gaaccagcgc
    46201 gtcaatacga acgcggtaac catgccggtg aggtaggcgg cgatgatcgc gggagtgaat
    46261 ggcatccaat ggctgtacag catccgcgac aggatgttgg cgagcgcggc gatgccgccg
    46321 gccacgagga acagcaggaa cgggcgcgac agggtcacgc catcgcctcg cgggccatgg
    46381 cgcggccgaa gccgatgctc tcggagatgc cacggtcctc aggataatag tgcgatgtat
    46441 cggccaccca caggccttcc acgggcaacc tgcgcggcgg aagccggtcg aggaagcctg
    46501 gttcgcagat gggctgcgca tgtcggtagc ggctgacccg tacttcgatg aaatcgtctg
    46561 catgcagctg cggattgatc atgcccaggt agcgccgcac cttgtcggcg aacacctcgt
    46621 cgctgtcgcc atagcgctcg tgctcgccgg gcatgtagaa cggcacgtag acgatatgcg
    46681 catccatcgg gcgcaggttg gtgtattcga cgatgccggg gatgtccatg tccggatcgt
    46741 tggtgttgac ccagaaattg gccgagaccg gcttgcgcag cttggcgatg acacagacca
    46801 cggcgatgtt gttcaacgtg cggaacttcg ccaggatcgc ttcgggcagg tccggggcca
    46861 gacgtggtac gaacggcagc ggcaccgtgg agatgacctt gtcgaaggcc aggtgctcgc
    46921 cgccgacctg gacgccatgt acgcggcccg cctcgatcac gatgcgctgc accgggctgg
    46981 acagtcgcac ttcgccgcca tggcgctgga tgtccgcatg cagggcatcg agcagggtgg
    47041 acgagccgcc ctccagatag cccagcttct cgcgcatcag gctgtaacgc gagcgaccga
    47101 tgcgccggat ccggctccag atccaggccg ccgacaggtt gccggcgtag ttgtagaact
    47161 tgtagtcgaa cagcctgcgc cacagcgtct cataggcttc ggccccgacc cagcggcgga
    47221 tccaggagga ggcttcgaca tgatccagcg ggtgccagtc gttgcgacgg gtgcacagga
    47281 aggcatgcag cccgtagcgg atcttggcca tcagcccaag gcccctgaag cgcagcaggg
    47341 cgatcggatt gccccatggc tgcaggcgct tgccgaacca gtagcccatg cgggtttcgg
    47401 tccagtgcat gcgatcaccc aggcccaact cctcgagcac cgccaggaaa tcgtggtcgg
    47461 aggtgcagtg gaagtggtag tagcgctcga tctgcatgcc gccgaaatcg aaacaggcgg
    47521 tcatcccgcc gacgcggtcg tcggcctcga acaccacggg ctggtggccg tcgcgggcca
    47581 gctggtatgc cacggccagg cccatcggac cggcaccaag aacggcgatg cgttcgctca
    47641 tgatcagaac tccagggcga tgtcgccgta ctcgggatcg ttgaaggtgg cgtcgatcgc
    47701 ctgggcaaag ggcgttggct gcacgccgaa gatggatggc cagtcgatga cctcgaactc
    47761 atcgtgggcc accagcgcct gcaactgtgc ggcggtgaac ggcggatcgc ggtcgaacag
    47821 tgcccaggtc ctcagcagca ggtggaacag ggtgtaggga atatgcagca ccatcgcgcg
    47881 tgcacccgta ctgcgcttga tctggcggat gatgtcgacg tagtcgacct tttcaaggcc
    47941 ggtgatgttg tagcgctggc cgctgatgcg tgagcgcagg cagctggcaa tgatggtggc
    48001 gaagtcgccg gcatacagcg gctggcgcat gtagcggcca tggcccggaa tcggaaaaac
    48061 gggaactctg cgcatgaagc gcgacagcca gcccaggtgc ttgcggtcga accagccgaa
    48121 catcagggta gggcgcagga tgacggacgc aatgttgcgg gcggccacac gctgttcctg
    48181 ttcgcgcttg gtacgggtgt agtcatcgtc ggccaccgag cagaccaccg aggaactgac
    48241 gtgcacggta tagggcacgg cgtggcgctc gatcgcatcg aggacatggt cggtggcggt
    48301 gatgttgttg cgcacgaacg gcaggggatc ggtgccgccg atctgtgcct gcagcatcac
    48361 cacggcgtcg gccgcagcga aatggcgttc ccacgggccg ggttcggcca ggtcggccag
    48421 ctcagtgatc acgtccggat gcatgcccgc cagcacctcg agattggcgg catgcttgtc
    48481 gatcaccacc agctgccgat agcccaggcg cttgaggatg gccaccaggt tctggccgac
    48541 caggccggcg ccgccgggaa tgatgatctt ctgctccagc acggagctcg atgcggcgct
    48601 cacagcgtga tcctgttgaa ggcggcctgc ggcagggtgc ggatcacccc catgatcaac
    48661 cgccagaagc ctggcgcgta cagcaccggg gtgccacggc cgatgccggc gacgatgcgt
    48721 cgcgcgatct ggtccggtgt cgcccacaag gggcccttgc gcaggtgggc cgtcatcggc
    48781 gtatcgacga agccggggcg gatgtccacc actgccacgc cccgtttggc caggcgttgg
    48841 cgcaggccgc tgagaaaggt gctgaccgcc gccttggcag cgccatagac gtagttgctc
    48901 tgtcggccac ggtccccggc gaccgaagtg atcaccgcca gtgtgccgct gccggcatcg
    48961 gccagccggt tggccagtgg tcccagcagg gccagggtgg aggtgccgtt ggtggcgaat
    49021 tcggccatgc aggcctgcac cgaagcctcg caggcggcct ggtcgggcag cgtgccgtgt
    49081 gcgatcagca ccacgtcgac cctgcccagt gcctgccatg cctgcgctag caggtcggca
    49141 tgagccggca ggtcgttgat gtccatggcg tgggtgtgcg tggcgcgcgc accgcggatg
    49201 cgcaggtcgt cgccaatggc agccagtcga tccgcgcggc gaccgacaag gaacagcgac
    49261 gcaccacgcg cggcatagcg ccgggcaacg gcttcggcga tggcggacgt ggcgccgatg
    49321 atgaggacac tctgcatgct tactccgtca cccggcgcca gaaaccggat gagaaacgtg
    49381 gatcgatgaa acgactgaag tcctgccagc gggggtagga ctgttggaat gacgtggccg
    49441 tcatccgcgc atccttcgcc gggtactgcg caccgcctgc ggcatcgacg atctggtcca
    49501 ggcgccgcag cagggccagc agggactcgc cggtgtttgg gaagtccagg gccagcgtgg
    49561 tgcccgggcg tggaaaggac agcatgccgg gcgatggccg cgtgccgaac tgcttgagca
    49621 ccgccaggaa cgaaccctgg ccactgcggg cgatttcctg cagcaaggcg gggatgccgt
    49681 cggcggccgc ctgcggtggc aacacgcact ggtattgcag gaatccagcc ggaccataca
    49741 tccggttcca ctggtcgatg ccatcaagtg ggtagaagaa gggcagcagg tgcgacgcat
    49801 ggcgccggcg cagtggcagc tggcgccagt aatagagcac gttgaacggg cgcagggtga
    49861 gccggttgac cagcgaaacc ggtggcgtca gcggcatcgc ccactgcctg cggggtgcag
    49921 caggacgttc gtcgagcggt tgtgcggcat ggttggcgcg ggtgaaatgg ccgcggccga
    49981 gggaacggcc acgcgccagg cagtcgatcc acgccacgct gtactcgtgg ctttcgcagc
    50041 tctccctgga caacgcgaag aagtcggcga ggttgcagaa gcggatgttc tccacttcca
    50101 ggctgctgcc tggcacccgg cgcagctgca gctcggcgcg ggtgaccagg ccggtcaggc
    50161 ccagcccgcc caccgtggcc ccgaaccagc catccgcatc gccgggacgg cacagccggc
    50221 gttcgccatc gctgcgcagc agctcgaaag agcgcacatg gtggccaaag cttcccgcca
    50281 catgatggtt cttgccatgg acgtcattgc cgatggcgcc ccccaccgtg acgtggcggg
    50341 tacccggtgt caccggcagg aaccagccct gcggcagtgc cagggcaatg atctcgtcca
    50401 gggtcacgcc ggcttcgcag tgcagccggc cgctgtctgg atcgaaggcg atgaagcggt
    50461 ccaggccacg acagtcgagc agggtcgcac ccgggttctg gcagctgtcg ccatagctgc
    50521 ggccattgcc gtacggcagc gcgctgcctt cgaagtccgg tagtccagct tggcggtcat
    50581 gcaccctcgc cagcgcttgc ggcgaacgcg gataccttcc ccaggaatac gcgcgcgcgc
    50641 gcatcagatc gccaccagcg caaacccgac gcacagcgcg gccacgatct ggctgacccg
    50701 atcggtggct gcgaatacga tggggtcatc atgcatcttg ccgcgatggg cgatcaccca
    50761 ggtacggctg acccagtaca gcaggatcgg gcagatgaac cacagcagct tcgggttgcg
    50821 gtacagctcc acgctgtcgg ggctgttgat gtacaacgcc atcaccagca ccgcgcagta
    50881 gcctgccgcg gcaccgagtg actgcagcag cggcaggtcc tccacgtcat agccgcggcc
    50941 gtcggcacgg gtgttgcccc gggccagcac cgagtgcagt tccgtgtagc gcttgagcag
    51001 ggccagcgag aggaagatga acatgctgaa ggccagcagc cagaacgaaa gctccgcgcc
    51061 gatggcaacc gtgccgccga tgatgcgcag ggtgtaaagg cctgccaaca gcaccacatc
    51121 gagcatgacc acgcgcttca ggcgcagcga gtagcccagg gtgagtgcgt agtatcccag
    51181 cagcacggtg gcaaatgacg ggctgcaggc caggccgatg gccaggccgc acagtgtcag
    51241 cagggggccg gcaaacaagc cgtgcagcag cggcagccgg ccagcggcaa aggggcgaag
    51301 gcgcttgcgc gggtggcggc ggtccgcacc gaggtcgagc aggtcgttga gtacatagac
    51361 gccggaggca cacaggctga aggcggcaaa ggccagcagg gcgtcggcga ccgccgttgc
    51421 ttcaaggaaa cgatgggcgg tcagcagcgg tacgaacacc agcaggttct tcaaccattg
    51481 atgcgggcgc agtgccttca cccatgcctg cagccgggag ggacccggcc aatgccccag
    51541 cacctgggtg tgtcgggcgg cggcgctggc gaggggcggg ccgttgttga ccacccaggc
    51601 gcctgatgcg cgtgcccaga ccggcaggtc gaccgtgccg ttgccggcat aatcaaagcc
    51661 gcgttcgcca aacgcatcca ccagggcctg cgccttgcgc gcaccggaca gattgcgctg
    51721 gccatcactg gcgatgacct gttcaaacag gcccagatgc gctgcgatcg gcgcgaccag
    51781 caactggtcc gacgcagtgc acagtaccct tggtcgttgc ggagtgtcgc gcagcagttc
    51841 cagcaccctc gggttgtagg gcaggtgacg gggatcgaca gcggcgcggg cagcaatccg
    51901 gcgcttcagc acagccttgc cctgcagcag ccagaacggc agcaggatca ggtacagcgg
    51961 attgcgtgca agcagcacca gcagtgattc atacaggatg tccgagtcca gcagcgtgcc
    52021 atccagatcc acgcacaggg cgcggccatg ggctgcgggg gaggtggctg gcgtcgctgg
    52081 aggcatcgtc tgcgggcgga tgcggcggat cgtgcattgt atccgcgttg gagcgcgggc
    52141 ccgaaaaacc tcgtcgcggc ccggggccga cctaccggca ccgtttgctg cggcgcaaac
    52201 ccgtcggttg cagggctgcg gctagaatgc gtatatccat ccgcagggta ttacagcaat
    52261 gcagcaatcg acttccggcg gcaagcgctt cgccagtgcg tcccaggccc tgcagggggt
    52321 ggtcgccgat ggccagaccc tggccgtggg cggctttggc ctgtgtggca ttcccgaggc
    52381 gctgatcgcc gccctgcgtg acagcggcgc caagggcctg accgtgattt ccaacaatgc
    52441 cggcgtcgat ggtttcggcc tcggccagct gctggaaaca cggcagatca agaagatgat
    52501 ttcgtcctac gtgggcgaga acaaggaatt cgagcggcag ttcctggccg gcgagctgga
    52561 gctggagttc aacccgcagg gcaccctggc cgagcgcctg cgtgccggcg gtgcgggcat
    52621 cccggcattc ttcactgcca ccggttatgg cacggtggtg gccgaaggca aggagacccg
    52681 cgagttcgac ggcaagcact acgtgatgga gaccgcgctg cgcgccgacg tcgcgctggt
    52741 caaggcctgg aaggccgatg aggccggcaa cctggtgttc cgcaagaccg cgcgcaattt
    52801 caacccggcc tgcgcgatgg ccggcaaggt ctgcatcgtg gaagtcgaag aggtcgtgcc
    52861 agtcggcagc atcgatccgg accaggtgca cctgccgggc atctacgtgc accgcatcgt
    52921 gcacaacgcg catcctgaaa aacgcatcga acagcgcacc atccgcgcgg agggcaactg
    52981 acatggcgtg gacccgtgac gaaatggcgg cccgcgctgc ccaggaattg accgatggcg
    53041 cctacgtgaa cctgggcatc ggcctgccga cgctggtggc caaccacatt cccgtaggcg
    53101 tggatgtgtg gctgcagtcg gaaaacggcc tgctcggcat tggcccgttc cccaccgacg
    53161 ctgaagtcga cgccgacctg atcaatgccg gcaagcagac cgtgaccgcg cgggctggtg
    53221 ccagctattt cggcagccac gacagcttcg cgatgatccg cggtggccac gtcaacctgg
    53281 ccatccttgg cgccatgcag gtgacggcca agggcgacct ggccaactgg atggtgcccg
    53341 gcaagatggt caagggcatg ggcggtgcga tggacctggt ggccggcgtg cagcgcgtgg
    53401 tggtgctgat ggaacacacc gccaggaacg gcgagcacaa gatcctgtcc gaatgcacgc
    53461 tgccgttgac cggcgtcggt gtggtcgacc gcatcatcac cgacctggcc gtgttcgacg
    53521 tgaccgacaa ggggctgctg ctggtggaag cggcaccggg tgtcagcgat gacgaactga
    53581 aggaaaagac cggcgtcgcg ttccagcgcg cctgatgttt ccagggcggc caaacgccgc
    53641 cctgttcctt gaggggccgc catgttgttc ccccacgacc tgcccgatgc cgatgtccag
    53701 cacctgccgg gctggatggc tgcggccgag gcggatcggc tcatgtccgt gctgcaggcc
    53761 gacgtgccgt gggacgtgca ccgcatccgc atgttcggcc gctgggtgga ctcaccgcgg
    53821 ctgagctgct ggataggcga cccgcaggcc cgctaccgtt attccggcgc cgagttcgtt
    53881 ccacatccat ggctgcccgt gctgcaggcc ctgcgtgagc acctgcaggc cgggaacatc
    53941 ggtcggttca acagcgtgct gctgaaccgt tatcgcgatg gcagtgactc catgggatgg
    54001 cacagtgatg atgagccgga gctggggccg tcaccggtga ttgcttcgct gagcctgggc
    54061 accgctcgtc gcttcctgtt gcgccgtcgc gatgagccag cgcgcagggc cgaatttgtg
    54121 ctggaccacg gagacctgct gctgatgcgc gggcagaccc agcgcttcta ccagcacgcg
    54181 cttccgaagt cagcgcggat ccgggaggag cggatcaacc tgacgttccg ctggatccat
    54241 tccccaggag cgggcgatcg tagcaggacc tagcggcgga ccaggtcgat ggcggctgtc
    54301 agcaggccgc gcccgaagta cccgtagttg ccggacaaca gctctgccat cactgcggga
    54361 atgcggcgca ggcgtgctgg ccccaggcgg gtgcgcaccg tcaggtgccg ttgcttccgc
    54421 tcgatccatt cgaggcgtga tccgggcagg cccagtgcgc gtgcgcgtac cagcagctgc
    54481 tcgcactgca gtcgttcgat ttccagctgg cgttcccgcc tcacctcgcg cgagacacca
    54541 tcctggtcgc cgagccccac ctggttgttg ccgtgcaggc ggtagccgat cagcggatcg
    54601 ggcaggctgt cgatgttccc tcgcatggct gccagcatgc tgatccaggc gtcgtggacc
    54661 cagcccgaag caggtagagg cagcgcatcg tccagcaccc ggcgacgcag cgccatcgcg
    54721 gctcctgtca tcagcggccg cttcagcaac agctcgaagc cgtggcctgc atgcatccgc
    54781 gcgtgctctg acggtcggta gcccaacgcg gaaaacaatc gtttggacag catccggccg
    54841 cttccgtcaa tcaactctgc atcgctgtgc agcgccagca gttcagggcg ggcatcgaac
    54901 tcggcgcaga aacgctgcag cttgtccgga taccagacgt catcctggtc gcacaggaaa
    54961 acgaggtcgc cgctacaggc gcggagcgcg ccatcgaagt tctgccgata gccgacgttg
    55021 cgcgaattca cctgcaggtc caccgcgatg cccagcgcct ctgcacgagg cacgaatgca
    55081 cgcagcaacg ccagggtacc gtcggaggat gcatcgtcgc ggatgacgag ctgatccgga
    55141 tggcgcgtct gcgccagcag gctgtccagc tgctcctgca ggaagcgctc gccgttgtac
    55201 gtgcagacgg cgatggaaat ggacgaggtc atcgggaggc ggtgcagcga ggatgcgtcg
    55261 agtatcgcat gcccccgtcc ggaccctccc gccctccgta gcgagcgggc ctgccgttga
    55321 tcagcgcagg acgcccggct ggtcggcctg tccgctcacc agcgtccagc cgaccacgtc
    55381 ctgcgccagc tgctgcaggc cgcgttcgaa cgcggcagtg accgccggga cgtcggtgct
    55441 gccgaccggc tgcgcctggc ggaaggtgcg gtcggcgacc acccgctgat cggcgacgtg
    55501 gatcagcttg gcattgacct cgatgaccac ggtgggcgtg gcctggccct ggtaatccga
    55561 ttcgaagcgg cgcacgtcgg tggacagctt gtagtcggca cggatgcccg cgctgctgcg
    55621 cgccacgccg cggatgcggc cggagtcctc gaagccgcgc agcagggtgt cctcgatcat
    55681 gtcggtggcc ggctgtgccc agctggcgcc cttgtagatc tccatctgcg acggcgtcgg
    55741 acgcacgttg atgcgcgggc tgtcgaccat gcgcgcggcg ctgggcttgg ccagtaccag
    55801 ctgccagctg gcctgtggcc atgtcggatc cgccttcacc tgcaccgcag gcgagtacag
    55861 agtcactgcg gttttctcgc tgctgccaag gatggagcag ccgcccagca gggtgaccat
    55921 cgaggcggcc agcagcaggc gcggaagggt ggtcgtgctc atttgggttc gaactccttc
    55981 ggtgcgtcgc ggcccagcag gtagcgcgcg gggttgttct cgaggcggtc gctgacccgg
    56041 cgcaggtcgc ggatcaggcc acgcagctcg gtcagcgtcg ggccaagctg gccgaggccg
    56101 tcattggcga agctgttgat cgctgcgcgg ttctcgccca ggatcgaatc ggcattgccg
    56161 gcggccgagt cgagcttgcc cagcgtggca tcgagcttgt cgatgatgcc cggcagctgc
    56221 tgcaccaggt tcttgtccag gcgctcgatg gtgccgttgg tggtcttcag cgtagtgtcc
    56281 aggctgcgtg cggcatcgcg cgcgctgagc agcagtgcct gggtgccctg gtcacggtcg
    56341 gccaggccac cactgatcgt ttcaagattg gccagcgttg cattgatcga agcgacgttg
    56401 cggtcgctga ggatctggtc catgcgctcg acgatgcggt tggccacgtc ggtgatgttc
    56461 tgcagcgccg agggcgtggt cgggatgatc ggtgccgggt ccttgttgac cgtggtcagc
    56521 gccggcgact gcggcgtacc gccgctgagc tggatgatcg acgggccggt gaggctggtg
    56581 atcgccagct tggcgcgggt atcggtcttg accggcgtgg tcgagttcag gcggatgcgt
    56641 gcgaccacct ggcgcggatc gtccggcacc aggttcagtt cggtgatcga accgaccgcg
    56701 atgccgttgt attgcaccgg gctgcccacc gacaggccgg tcaccgcctc gcggaacacc
    56761 acgcggtatt cctgccaggt acggtcggag gagtacttgg cggcccacag gccgaaggcc
    56821 agcagggcca ggccggtgat cagggtgaac gcgccgatca gcacgtagtt ggctttggtt
    56881 tccatggctc aggcactctc gatctgttcg ccgcgcgcgg cacgcgcacg cggtccgtgg
    56941 aagtattcct ggatccacgg atgatccagt ttctcgattt ccggcaacgg tgcattggcc
    57001 accaccttgc ggtcggccag cacggcaacg cggtcgcaga tggcgtacag cgtgtccagg
    57061 tcgtgggtga tcaggaacac ggtcagcccc agcgcttcct gcagggtctt gatcaggcgg
    57121 tcgaacgcgg ccgcgccgat cgggtcgagg ccggcggtgg gttcgtccag gaacagcagc
    57181 ggtggatcca gcgccagcgc gcgggccagg ccggcgcgct tgcgcatgcc gccggacagc
    57241 tgcgaaggca gcttgttgat cgcgtcggcg ggcaggccgg ccagcttcac cttcagcagt
    57301 gccagttcgt agtgccagcg ctcgggcagc tcacgatggt gctccttcag cggtacctgc
    57361 acgttctcgc ccacggtcag cgaggagaac agggcgccgt cctggaacag cacgccggtg
    57421 ttgcgctcga tgtgcaggcg gctttcggga tcgtcggcac gtgcgtcgcg gcccagcact
    57481 tcgatctggc cttcgtcggg cgtgcgcagg ccgaggatcg agcgcatcag caccgacttg
    57541 ccggtaccgg agccgccgac cacgcccagg atctcgccgc ggcgcacgtc cagctccagg
    57601 tcctcatgca cggtctggct gccgaagcgg ttgaccaggc cgcgcacgcg gatcgccagt
    57661 tcatggccct ggtcgtcacg catgtcgagg atttcggggc gggcggatgt gctcatgtca
    57721 ccagtccatg tgcatgaacc acaacgccgc gaaggcgtcg atgatgatca ccagcgagat
    57781 cgtctgcacc acgctggagg tggtgcgttc gccgaccgac tgcgcggtgc cttccacctt
    57841 cagtccttcc aggcagccga tcaggccgat cacgagcgcg aacaccggcg ccttcgacag
    57901 gccgaccagc atgtgccgca cttccatcgt ctcgtgcatg cgcgcgatgt acatctgtgg
    57961 cgggatgtcc aggtcgaatg cgccgacggt gatgccgccg gcgaggccgg caaccatggc
    58021 aatgaaggtc agcagcggca gggtcaccag cagcgccagc aagcggggca gcaccagcag
    58081 gtcgaccggg tccagcccca gcgtgcgcat cgcatcgatc tcctcgcgcg ccttcatcgc
    58141 gccaatctgc gcggtgaagg cactggcggt gcggccggcc agcacgatgg cggtcagcag
    58201 cacggcgaac tcgcgcagga aggcgatgtt gaccagctcg acgacgtaga tctcggcgcc
    58261 gaaatcgcga aggatggtcg agccgaggaa ggcgatcacc gcgccgacca gataggacag
    58321 cagcgccacc agcggtaccg catccagccc cacctgttcc atctggtgca cggtggcggt
    58381 caggcggaag cgtcggggtt ccttgaccag gcgcgcggcc ttgaccaggt tctcgccgag
    58441 gaaactgcac agcgccttga tgttgtggcc ggtggcatgg acgctgacac ccagtcgctc
    58501 cagtgccgcc agcacgccga agtcgcgctt gggcttgggc cggtcgtcgg cgacctcttc
    58561 gatggtgcag accagcgcct ggtggtcctg gcggaactgc agcgcgtctt cgccgaggtc
    58621 ggcgcggtgg gccacgcgaa gtacctgcag cacgccggcc gaatccatct gctcgatgcc
    58681 ggtcgcatcg atgccggtca gcttttcggg aacgccacgc aggacttcgg ccgcggccag
    58741 cgcggttttc agggtccagg tgccggacag gcggatcagg cccgggtcat gggcgtcctg
    58801 ttcgagctgg ggggcgaggt tcggggtcac ttgggccatt cgggtcgcag cataaccggt
    58861 ctgtattggg catcgcgtcg aactcggatg aatttctccg gtaaggcccg gcctaggtaa
    58921 tactacgtcg catgtccgca gacgctcaca cgatccccac gccccaggcc acctacgcgc
    58981 agcgcgtggc cttcgtttcc gagatcgccg gacgcctgca cagctacggc accacggccc
    59041 agcgcctgga aacggcagtc gtggcactgg cccgccagct cgatctggat tgtgaaccgt
    59101 ggtcgaatcc caccggtatc atcctcagct tcagcgaccc ggcgcaggcg atcggctcca
    59161 gcgacatcac ccgcgtgatc cggctggcgc ccggcgagaa cgacctgcac aagctcagcg
    59221 tcgccgacca tatcgccgag gaagtgtcca acgggcggat gagcatcgcc cagggccaca
    59281 ctgcactgcg ccagctggac aaggatccgg gccgtcgcgg caagctgcgc accatcctgt
    59341 cgttcagcct cggcgcggcc ggcgtggccg gcatgtggaa gctgccgtgg ctggacattg
    59401 ccaccgccgg tgtcatcggc ctgatgatcg gcctgctcgg catggtcacc gaccgtcgcc
    59461 cggccacccg cgaggcggcc gaagcactgg ccgcactgct ggcgggcctg gtcgccactc
    59521 tggtcgcgtc gttcatcggc gcgctcaacc tcaacacggt gatcatcgcc tcgctggtgg
    59581 tgctgctgcc gggcatgtcg ctcaccaatg cagtcaatga attggccagc cagcactggg
    59641 tatcgggcac cgcgcgtttc gccggtgcac tgaccaccat catgaagctc agcgtcggcg
    59701 cgatgatcgc ggtaaccctg gccgatgtgc ttgggctgga cccggtgatc cgcgcggcgc
    59761 ggccccaggg gccgtgggtg gagtggggct cgctgctgac cgccgcgttc gcgttcgcga
    59821 tgctgttcaa ggccaaccgc cgcgattacc cgtgggtgat cgcggcgtcg gtggccggtt
    59881 atgcgatttc caagttcggt ggccatgcct ggggggcacc ggcgggcatc ttcctgtcgg
    59941 cgatgctgtt gaccgcgggc ggcaatctgt tcggccgcct ggtcggtcgc cccggcgcga
    60001 tcatccgcct gccgggcatc atcatgatgg tgcccggcag caccagcctg cgtggcgtgc
    60061 tgaccctggt ccagcagcag gacgtgggtg ccggccagag cgtgttcctc accgtgctca
    60121 acgtggtgat ggcgctggtc gccggcctgc tgttcggcaa cctgctgatg cccgcgcgca
    60181 aaaccctgta atcgcccttc tgtgctgctt gctgtgggtg tggaccgttg ctccacgcac
    60241 ctcccgggaa atgaaaaacg ccggcgttcg ccggcgtttt tcattgcttc ccgatctggc
    60301 ctcaggcctt cttgatcagg aaatcttccg gcttcttgct gcccttggcg gtcagctcgg
    60361 ccatccagcg cggctgcttg ccacggccgg tccaggtttc cttcgggttg gccgggttgc
    60421 ggtacttcgg ggcgaccttg cccagcttgc ggccagccgt cttggacggc gccttggtcg
    60481 cagtggcgac cttgcgggcg cgcggagcgg gggcgccgcc gaacagttcc tcgatggtgt
    60541 aaccctcggt cttggccagc ttggtcagct gggcccgtac cttggtgatc ggccggcgct
    60601 tggcgacgat ggtctgctgc ttcttcgcgg tgcggatcag ggcgcccagc tctcgtgccg
    60661 acaggccggt caggtcaatg ctcatttacg gttactccgg aaactaatgt gtggacggga
    60721 cgagccagtc catggcgtcg cgggacagaa taaagatgaa ttaatccaag cacaaatgca
    60781 ggcgggtcag ggcttggcgg catgccgact gcagtgcgtc gattttgacc ggattatgtc
    60841 tgttgcagta tcgggcggtg gttcgggcgg caaaaaaaga ccggggcatg ccccggtctt
    60901 ttcctgatca accctgcagg cgctgcagca gggtggcctt gtcgaggctt tccgcttcgc
    60961 tggcgcgacg cgagcggtac tcgtaggtac cggcggccag gccgcgttcg ctcaccacca
    61021 cgcggtgcgg gataccgatc agctccatgt cggcgaacat cgcgcccggt cgcaggccgc
    61081 ggtcgtcgag cgcggcatct aggcctgcat cgcgcagctc ctgcagcagg ctggcagcgg
    61141 cgtcggcgac ggcggcgtcg cccttcgggt tgatcacgca caccaccacc tgccacggcg
    61201 ccatcgcgtc cggccagatg atgccggcct cgtcatggtt ctgttcgatc gcggcagcaa
    61261 ccacgcgcga gatgccgatg ccatagcagc ccatcgccat caccgccgcc ttgccgttct
    61321 cgtccagcac ggtggcgtcc agcgccttgg catacgtgcg gccgagctgg aacacgtggc
    61381 cgacttcgat gccgcgtgcg atcttcagtt caccgccgtc cagcgcgcgg tcaccggcac
    61441 gcacgttgcg gatgtcggcc acttccggct ccgccaggtc acggccccag ttgacgccgg
    61501 ccaggtggaa gccggcttcg ttggcaccga cgacgaagtc ggacatcgcc gccacttcgc
    61561 gatcggccac cacgcggatg gccttggccg gcgcgaccgg gccgaggaag cccggcacgc
    61621 tgccgaggtg ctcggcgatt tccgcctcgc tggcgaaacg ctgctcagcc aggccggcaa
    61681 ccttggccag cttgatctcg ttgacctcat gatcgccgcg caccagcgcc agcacgaact
    61741 gctgcgcttc gccttcgccg gcgatcagtg ccaccgactt cacggtgcgc tgcaggtcga
    61801 tgccaagcag ggctgcaacg tcctcgcagg tcttctgggt gggcgtatcg accttgcgca
    61861 gggcttcgcc ggcggccgca cgcggcgccg gatcggcagc ggtcgccgct tccatgttcg
    61921 ctgcgtagtc cgaaccggtg gagaacacca gcgcgtcctc gccggaatcg gcgatcacgt
    61981 ggaattcctg cgaggcatca ccgccgatgg cgccggagtc ggcctgcacc atgcggaaat
    62041 ccaggccgag gcgggtgaag atgcggctgt aggccgactt catgttctcg tactcgcgca
    62101 ccaggcattc gtcatgcagg tggaacgaat aggcatcctt catcaggaac tcgcgcgaac
    62161 gcatcacgcc gaagcgcgga cggatctcgt cgcggaactt ggtctgcacc tggtagaagt
    62221 tgaccggcag ctgcttgtag ctggacagct cgctgcgcgc gaagtcgcag gcggcttctt
    62281 cggcggtcgg gctgtagcag aacacctggt ccttgcgatc cttgatcttc agcagctgcg
    62341 ggccgaactt ctgccagcgc ccggtctgct cccacagttc cttcggctgg atggtcggga
    62401 tctggaattc cacggcgccg gcgcggtcca tttcctcgcg gacgatgcgt tcaaccttgc
    62461 gcagcacgcg caggcccagc ggcgaccagg tgtacaggcc cgatgccagc ttgcggatca
    62521 tgcccgcacg cagcatcagc cggtggctgg tcagctcggc gtcgctgggg gtttccttgg
    62581 tggtgtgcag gtggaactgg gagaggcgca tcgtcggctt cggataacgg cagagacgcc
    62641 tattctgcca gcccggccgg gggga
//
LOCUS       DAOKIP010000005        60424 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.005,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000005 DAOKIP010000000
VERSION     DAOKIP010000005.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 60424)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 60424)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..60424
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.005"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..166)
                     /locus_tag="QEL58_000265"
     CDS             complement(<1..166)
                     /locus_tag="QEL58_000265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005419553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674791.1"
                     /translation="MTTPATPENAPGPVLLPTPEVVQAQQLLARQQLAVAMDRARTAA
                     TRTAAPAALQS"
     gene            complement(387..2918)
                     /locus_tag="QEL58_000266"
     CDS             complement(387..2918)
                     /locus_tag="QEL58_000266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing protein"
                     /protein_id="HDS1674792.1"
                     /translation="MPSSRSAAARRPGSIAHKLMLGTAVIALLCFGLTAFLIYRQASA
                     SLIDASRQTMTSEANAEARQVAADLGTAFASNDAMVEAVLAQRARGDVPDRASLAAVL
                     GEQLRTHPEWLGKSTMWEADAFDGKDAEFVNTEAHDATGRYMSYWAWQDGAPQQSPMT
                     DYTEAADGSADWYMDPSRDKLPKVSEPYAYDIGGQQVLMSTLSTPIIEKGTFLGVFTV
                     DFSLAALQKHLATLTPMGAGRVELLSPKGVVLASANAAEIGKPRSDALTRSMLADIAA
                     DRRFEAFTPDAAGNVRVYVPLRVGDAPQRFALGVVMPHAVIVAEARQLLWLTLLVGVV
                     AALALSAGVYVLLRRLAIRPLAEAVRVAGDVAAGKLDSTLPARSNDEVGRLLEAMQGM
                     RGQLQAVMAAQAEMARRHDAGELSYRMDASAFPGEYGRMVADSNQLVASSNAVTQRLV
                     EVMQRYAVGDLSVDMEALPGEKAVFSAAMATTKSNLAAINDQIQQLAAAAAAGDFAVR
                     GDALRFDHDFRRMVETLNTMMQVSDHNLAELSTLLRAIAAGDLTARMQGDFHGVFAVM
                     RDDANSTVQQLTGIVGQIQQSAASIRLAAGEIAAGNSDLSRRTEQQAANLEETAASME
                     ELTSTVRQNADHALQANTLAGSAAGVASEGGQVVSQVVQTMEQIEASSQRIAEIISVI
                     DGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRALAQRSAGAAKEIKELIDASVA
                     QVGAGAELVHGAGRTMQEIVGQVGRVNEIMAEISAASREQSAGIEQVNQTVVQMDETT
                     QQNAALVEEASAAARAMEEQAEQLAVAVSRFRLQAGPVAVARRAA"
     gene            complement(3129..4022)
                     /locus_tag="QEL58_000267"
     CDS             complement(3129..4022)
                     /locus_tag="QEL58_000267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006395443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HDS1674793.1"
                     /translation="MKILLTGSSGRIGRAIFGALAAAHEVVGLDRSPFATTRIIADVT
                     DRQAVERAVRGVDAVIHTAALHAPHVGLVPDAVFQQINVEATSHLLQAAREAGARRFV
                     LTSTTALYGHAVVAGGCRWIDEDTEPLPRTIYHRSKLQAEALAMSAAAPGFSVRVLRM
                     GRCFPEPPERMAMFRLHRGIDARDVASAHAALLLDDGAAFARYIACAPTPFRREDCLE
                     LATQPRNVLARRVPQLLAEFERRGWPLPMSIDRVYDSARLRNELGWQPRFGPDDVLQQ
                     YAAGSIEVLPRAQWIKDRVAE"
     gene            complement(4121..5032)
                     /locus_tag="QEL58_000268"
     CDS             complement(4121..5032)
                     /locus_tag="QEL58_000268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019338872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HDS1674794.1"
                     /translation="MAVSWMLGALLAAACPSQDAVLQAAATAIQAQYLDEAEGARIAA
                     AVRGWSSQRRYADSCADPQAFSARLNQDLDVFDGHFHVERVDADAGQDDWLMAWRADA
                     RGNGAGVREVRVLEGNIGYLRLSTFYPLDLARPKLVAAFSLLADTDGLVLDLRQNGGG
                     DDGSADLLVRTLLEPGITEVQALEQRGRRTAVRLPPASLPPYLKPLVVLIDRRTGSAA
                     EFVAYSLQAVGRARIVGSRSGGAAHMFDDPVQLPDGYQISIPDRQPINLRTGGNWERT
                     GITPDVPGGDDPLFIARQLLAPPTSPR"
     gene            5083..5547
                     /locus_tag="QEL58_000269"
     CDS             5083..5547
                     /locus_tag="QEL58_000269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HDS1674795.1"
                     /translation="MDLQHATLGTLLRALLDQLDPAVEQAYRDLQLDYRPRYTPVLRT
                     LMAQGPCRIKDLALACGLSHSALSQTVAAMVRDGWLHSVIGEDSRERILQLSPHALRA
                     VPALQAQWQATAHAARSLEADLGQSLEQVLRSALQALEQRPFAQRLREAREG"
     gene            5711..6013
                     /locus_tag="QEL58_000270"
     CDS             5711..6013
                     /locus_tag="QEL58_000270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012481337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="general stress protein"
                     /protein_id="HDS1674796.1"
                     /translation="MTGQNPRSSTRGFASMDGDKQRAIAAKGGRAAHASGNAHEFSPD
                     EARIAGRKGGEAISRDRQHMAAIGREGGHARHANARQQQQQASLDPVAKDPQRQQG"
     gene            complement(6025..7497)
                     /locus_tag="QEL58_000271"
     CDS             complement(6025..7497)
                     /locus_tag="QEL58_000271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDS1674797.1"
                     /translation="MQRLRRPALVLAAYLGTFLASLDISIVNVALPTLQQALDTDMAG
                     LQWVINAYAIALSALMLSAGPLGDRYGHRRMWLLSVATFTLGSLLCACAGNLQTLVAG
                     RVVQGIAGALLIPSAMPILSHAFPDPRQRARAIGGWSAFSALALVLGPLLGGVLVQRA
                     GWASIFLINLPLGLLALMLGAWGIPERRHPHHAALDPAGQLLSVVALGALSYGLIAIG
                     EQGLLAPATLSALGIAGAGLVLFGLVERRVARPLLPLDLFADRRFGMLNLASFVLGFT
                     AYASLFFLSLFFQQAQGLSAASAGSQLVPQFLLMGVVSLLFGRLVVRVGLHTALVCGY
                     VLVAVALCAMATLQPATSPGQASALLMLLGIGMGLAVPATGTAVMAQVPAERAGIASA
                     TMNALRQAGMSLGIALLGSLMGLRAVRQFAASALAAGQPGLAAHARGLILHPGSSYST
                     PQVVAWYRSAMASGFGWAMAVAGVLALLAAIGLRRLRLAH"
     gene            7623..8240
                     /locus_tag="QEL58_000272"
     CDS             7623..8240
                     /locus_tag="QEL58_000272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014648524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HDS1674798.1"
                     /translation="MQTPAAARPRTKPAETRLEELMDAAQALFLSQGVEATTVSDIVA
                     AADVAKGTFYTYFASRSEILQALAQRYTRHFIEDVDQAVQQHPAADGVARLRAWIRAN
                     IEIYVRTHAVHDVVFAHHHHHQRGNAERNAIQRQLLSILETGMTAGLWQLPSPQVTAS
                     LIYAGVHGATDDLIAAPAQDADAFIAAVVDDCLRMVGVAPAATHP"
     gene            complement(8256..8606)
                     /locus_tag="QEL58_000273"
     CDS             complement(8256..8606)
                     /locus_tag="QEL58_000273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HDS1674799.1"
                     /translation="MAVRRVVANIATPDPQRAAAFYGDLLGMPVVMDHGWIVTHGGQG
                     SALAQVSFASEGGSGTAVPDLSIEVDNLQEVLERMHAAGIALEYGPADEPWGVRRFFV
                     RDPFGRLLNILAHC"
     gene            complement(8729..8929)
                     /locus_tag="QEL58_000274"
     CDS             complement(8729..8929)
                     /locus_tag="QEL58_000274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012512190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674800.1"
                     /translation="MRALKKMVAGAVFALACTGSVAVAGPVEPCDKPCWRAYQMCLAS
                     GVDAGECQQAYNTCVVDLCMGV"
     gene            9118..12477
                     /locus_tag="QEL58_000275"
     CDS             9118..12477
                     /locus_tag="QEL58_000275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010481263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter domain-containing protein"
                     /protein_id="HDS1674801.1"
                     /translation="MNHPLYGRSSRSLPHRPLALAVASSLLLATTLPAMASESLDAWQ
                     HQRQLQAAWARPVADVASASTAPTATAPATGSTALLGKPGDAASWRSDEFNADWGLAA
                     MGADYAYARGLTGQGVRLALFDSGSALAHPEFAGRNTSSITIGADCATPGVVAGAGAC
                     GQTRGEQPGYNYYGLGPGVPAALAARLIAAGQPYGFSYADHGTHVLGTIGANRDGKGM
                     HGVAFGSNLTAARVFGDTYYEWRLDPDNFYRPRALYRTDPDDAATLDMYAQIQAQGVR
                     AINHSWGISTRNMTAAALDAQYAAIGDGYDVYGSIYAGSGDKPGSTLIQVWSAGNGSG
                     AVAGITASMPRWKPEIEPYWLAVANVRRPNAAAGETDYVIDGSSSICGVAANWCISAP
                     GTDILSTIVSGEIKGRIENTSAYVRLIIDSENTQYTYGTKTGTSMAAPHITGALGLLM
                     ERFPYLDNAQVRDVLLTTARDLGAAGIDPIYGWGMVDLRKAIEGYGSLRVDTNVVMNQ
                     KAGGLKVWEGDAWDDWTNAIGGPGKLTKSGIGWLRLSGDNTFNGAVLREGTLELNGSN
                     TLTSAVDVQGGQFLLNGSLVSTALTTHGGVSTVSASGVLNNSNLTVDGGVVSFNGTQT
                     GGTTTVGANGLLKGVGTLGSTRVDGTIAPGNSIGTLTINGNYVQGASGVFAAELAPGG
                     RSDQLHVTGTATLGGTLVALPEPGTYYLGEQFNFIRADGGVSGQFARTDFSAFSPFLQ
                     FSLAYGANGARIDVARGALLASAASTPNQRAVAAAADVLAINQGLPKPLTQLFPQQVG
                     GVLDGIGGELHAATALALVEGSRHVRDAALSRRAGAAAPGAEPGDATGAWVQAIGGNG
                     KLDGNSNTARTDTNSNGVLVGVDREFGGWQIGVLAGTGRTDVKQQERRARSKIDNTHF
                     GAYASHNWGGFGLRGGVAWSRNEVKSNRDVAFAGFSDSLSARYNAHTRQAFIEAGYRF
                     GGAEGGLEPYLQVARVEVDLKQIDERGGAAALHGKVDDTGTTVATAGVRFDKGLKASF
                     QQDSWLHLRGGVGYRRASGDRSQVANLAFANSTTTFAVEGAPIADNAVVAELGLSAWL
                     TPRQQLELGYSGQFGSESRDHGANARWSIRF"
     gene            complement(12627..13079)
                     /locus_tag="QEL58_000276"
     CDS             complement(12627..13079)
                     /locus_tag="QEL58_000276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019303138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PA2169 family four-helix-bundle protein"
                     /protein_id="HDS1674802.1"
                     /translation="MSTQSTIEHRLNDLIEIARDGKSFYEEAATKVKDAELSALFTRI
                     AGVKGRIVAALSGSVAASGGKPAEHGTVVGSMQQFYGKVRAAFGDTNYGYVAELEESE
                     DRLLGAFKDVLKENDLPPAVRQEVTQLLPDVQECHNVMRARKHAMKAA"
     gene            13553..14194
                     /locus_tag="QEL58_000277"
     CDS             13553..14194
                     /locus_tag="QEL58_000277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005411173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HDS1674803.1"
                     /translation="MCPILTAFATSPDRGQGLARDMRVRWALEELGVAYDVQLLTFAE
                     MKQPAHLARNPFGQIPTWQDGGQVLFESGAIVLHLAEQYAGLLPRDPDARMRAIMWMF
                     AALNTVEPPVVERSMAWVLEREQPWYAQRLPMLDERVRTRLAQLSAALGDSAWLDGGF
                     SAGDLMMVAVLLRLKSSGLLDEFPQVSGYVDRATQRPAYQRAFAAQRAVFQNG"
     gene            complement(14218..14625)
                     /locus_tag="QEL58_000278"
     CDS             complement(14218..14625)
                     /locus_tag="QEL58_000278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008267978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674804.1"
                     /translation="MAYSGSMTITPKWLYLAAGLSVLVSLLAWSVEWSGLAYVCPYCR
                     VQRTVIGVLGLLMLFARPGGLIVPWLAYTSGGFAFVVAAMQHFNGWKRISAGEFSFNA
                     QWYIDPWLLSGCAMLILVAQLMLVQAASRPRPR"
     gene            complement(14675..15094)
                     /locus_tag="QEL58_000279"
     CDS             complement(14675..15094)
                     /locus_tag="QEL58_000279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010481241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="H-NS histone family protein"
                     /protein_id="HDS1674805.1"
                     /translation="MTIDIESLSLRELGALVVAAEQRKQLISNRRPASAVRRLLKAAA
                     AEAGYTLEELFGAEATEEDAPRRKPARRRTGKVAAKYRDPEYKRLTWSGRGRMPRWLA
                     AKVQKGHKVTDFLIPGLARPTARKSSPIGKRTVFKKD"
     gene            15215..15613
                     /locus_tag="QEL58_000280"
     CDS             15215..15613
                     /locus_tag="QEL58_000280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010481248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HDS1674806.1"
                     /translation="MSTSSHSLAYLLARLLLMALFLVSGIGKLGDPAATLGYMEAMGV
                     PGILLWPTIAFEIGSGLCILLGFQTRLVSVVLVVFSLVTAFIFHHNVADPTQQIMFLK
                     NLGLAGGFLLLACTGAGRYSIDGRGRRAQR"
     gene            complement(15690..16688)
                     /locus_tag="QEL58_000281"
     CDS             complement(15690..16688)
                     /locus_tag="QEL58_000281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDS1674807.1"
                     /translation="MGIETDKRIEIALLIYPDCQMAAIHGLTDLFRIANEWATYPHED
                     DRQCFIRVTHWQLNLASGRMECCWDSDPGDVNAPAFVISPPSVAMPERMSAMPRQAQW
                     LKELHSLGAIMCSVCAGAFVLAQTGLLARRRVTTHWAFAELLASTYSDVQVTTENVVI
                     DDGDVITSGAILAWNDLGLLIVDRTMGSSVMLATARFMLSDGIRQDQRPLQGFLPRFD
                     HDDAAVLAVQRFILSQPGKRHTVIALAERAHLTERTFIRRFQKATGFNPADYIRQVRM
                     AKARDALQLGDLPVARIAASLGYDDAGSFRKAFQGIVGMSPSAYRDHFRIRRRMQG"
     gene            16890..17720
                     /locus_tag="QEL58_000282"
     CDS             16890..17720
                     /locus_tag="QEL58_000282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019467173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDS1674808.1"
                     /translation="MATVTTKDGVEIFYKDWGPRDAKVIHFHHGWPLTSDDWDAQMLF
                     FVNKGYRVVAHDRRGHGRSSQVWDGHDMDHYADDVAAVVEKLGTQGAMHVGHSTGGGQ
                     VVRYIARHGEKNVSKAVLISSVPPLMVKTAANPQGTPKEVFDDFQAQLAANRAQFYHD
                     VPSGPFYGYNRPGAKPSDAVIWNWWRQGMQGSAKAHYDGIVAFSQTDFTEDLKGISIP
                     VLVIHGDDDQVVPYADSGVLSAKLVKNGKLITYEGAPHGIPTTHADRINADLLAFLES
                     "
     gene            17915..18160
                     /locus_tag="QEL58_000283"
     CDS             17915..18160
                     /locus_tag="QEL58_000283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014038618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674809.1"
                     /translation="MRDIGQFYVTSVEGVTRADGTLLQVTRIDCACIKCSWQFRAIPN
                     HGLVDLDGAAALSCPTCGNHQSVSRARLEELNRRNGE"
     gene            18253..18504
                     /locus_tag="QEL58_000284"
     CDS             18253..18504
                     /locus_tag="QEL58_000284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014648542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674810.1"
                     /translation="MSHTGLFQITNLTYKAGEHGTLARALQIVATCTACGATSVWGED
                     EMEHVAGGTVLACRNCGVRQAISNARLSSSPSDIRHPRR"
     gene            18683..19243
                     /locus_tag="QEL58_000285"
     CDS             18683..19243
                     /locus_tag="QEL58_000285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006367816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fasciclin domain-containing protein"
                     /protein_id="HDS1674811.1"
                     /translation="MKALQRIAATVSFAVLVSATSLSFAANTVMVGGAEMYPSKTIVQ
                     NAINSKDHTTLVAAVKAAGLVDTLNGAGPFTVFAPTNAAFGKLPAGTVDTLVKPENKA
                     QLTKILTYHVVPGNYSSAQLMADARKHGGKAILKTVEGESLTIALHDGKLWVIDAKGG
                     KAGISIADVGQSNGVIHVIDTVLMPK"
     gene            complement(19505..19861)
                     /locus_tag="QEL58_000286"
     CDS             complement(19505..19861)
                     /locus_tag="QEL58_000286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008267900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674812.1"
                     /translation="MTTRKIPPFPVDEPTNDDDNPAFDLSTFQGCLKRIRDGEGSDGM
                     LWPEENLSDGRRQSLARIDRAAVGMLTAVEMLHAASRCESTATPDRHLDEGVVEGLFF
                     ACRELAELVCREVRPS"
     gene            complement(19988..20149)
                     /locus_tag="QEL58_000287"
                     /pseudo
     CDS             complement(19988..20149)
                     /locus_tag="QEL58_000287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659280.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="RHS repeat-associated core domain-containing
                     protein"
     gene            complement(20191..20550)
                     /locus_tag="QEL58_000288"
     CDS             complement(20191..20550)
                     /locus_tag="QEL58_000288"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674813.1"
                     /translation="MKIELLVEWYDGELQQVMEDGGRYLYAICVEADFSKPLQDRVYF
                     VINILAKEKRMIERFLADADMDGLDRLLRDELYGRRGAIFLGDPNNWRVESADFSIEP
                     APYLKFFAFPVVDVLVA"
     gene            complement(20547..20870)
                     /locus_tag="QEL58_000289"
     CDS             complement(20547..20870)
                     /locus_tag="QEL58_000289"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674814.1"
                     /translation="MSRAPGGKSAVKAAGFFVRFGKGAESAESLAAQAVKAEKAGFPH
                     GVSVKAQERVSAADRLKNRVADQAEAKSAFNTPQTGNNPNHHTVELPKPVTEKVAQKF
                     NEVYK"
     gene            complement(20910..21281)
                     /locus_tag="QEL58_000290"
     CDS             complement(20910..21281)
                     /locus_tag="QEL58_000290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674815.1"
                     /translation="MNETTIAKDGENQIAVPQAWRPTLAAIVDALIQGGEPSLPQVTL
                     QAPDVWASAQDSIRAYGAHLKRLPDESWNSSICIWYGDFWNVLVDLYTEEEGRSDLVL
                     QTHVYEVGDGYRYEVVLAYVP"
     gene            complement(21284..21760)
                     /locus_tag="QEL58_000291"
     CDS             complement(21284..21760)
                     /locus_tag="QEL58_000291"
                     /inference="COORDINATES: protein motif:HMM:NF013964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HDS1674816.1"
                     /translation="MGATSAYSNFSQGNVGEGIVDSIGVAIDATAAAVPFVPGGTGAA
                     IKAARGLEKAVDGARAADKLSDAGKMAGDLPKPPTGPGSVPVAQRDPQRLFTDSARES
                     KRAEQGGKCATGCGTSIDRSNSAGHHVERHADGGPTTSSNHAEVCLDCHKKLHGRD"
     gene            complement(21797..22480)
                     /locus_tag="QEL58_000292"
                     /pseudo
     CDS             complement(21797..22480)
                     /locus_tag="QEL58_000292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659280.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="RHS repeat-associated core domain-containing
                     protein"
     gene            complement(23296..23526)
                     /locus_tag="QEL58_000293"
     CDS             complement(23296..23526)
                     /locus_tag="QEL58_000293"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674817.1"
                     /translation="MSNISDLLESRLVDGSDVYIDAGMSSSEYLEGLANDIRRNACQT
                     FELSAVVMAPGIPGFDNGEEISGMCVAKEGGR"
     gene            complement(23725..24078)
                     /locus_tag="QEL58_000294"
     CDS             complement(23725..24078)
                     /locus_tag="QEL58_000294"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674818.1"
                     /translation="MSLELTSSSTVVQGWDEFGTINVEILSSALVESKHEWVNLELSE
                     ALDVTRVEVVRWQGAGLIVDSGIRLHFSDDRILSIVAVDVPGALLLTLPGDVVPCSWQ
                     FPADEYVFVSIDGAG"
     gene            complement(24242..25306)
                     /locus_tag="QEL58_000295"
     CDS             complement(24242..25306)
                     /locus_tag="QEL58_000295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674819.1"
                     /translation="MKNGLNHSFDFGNRLREVTGKESYRYDALGRRILASAPGLGVVL
                     SQYAQDGRLLFQSDGRKGLGREYVHLAGSLIARRDYAGADAKITYLHTDALGSPVAST
                     DASGNVIERTHYEPYGAPIGKVVDGPGYTGHVMDGETGLSYMQQRYMDPQLGVFLSVD
                     PVTAYEQPVGQFNRYRYANGNPYRFTDPDGRNPTILAPFVVGPLVVATVYYLSTTPEQ
                     RQQAGQAIDRSVKRLFQKSEAGSSDGAGIDDGGARTPALPTDLVGDQGSPLAGPNKSG
                     SRHTSGNLKPEFGGTGSYDDDLKTLAGDTRPTVRGDSAPPGAQIGENGVFGRETNSSG
                     GKSIDIPANGDKPHETLHYD"
     gene            complement(25413..26771)
                     /locus_tag="QEL58_000296"
     CDS             complement(25413..26771)
                     /locus_tag="QEL58_000296"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674820.1"
                     /translation="MEELEQFIDGVHLRGVSYRTDAPYEIIHPRIVKRDGEIMIYRHD
                     QRHQADGPYLPVKVFLRELVRGTPGLTATGYRANKKQTTLTFDKRDRVEISPALRAYL
                     SREVVRPHLDAEANHFKARFLDRNNSSLDTWLPKYREATVAVASALRSDRVDDIIDLI
                     WVMQDNSISHAGQGTLGRAAVERVRPQLVEMTKQISADGTPESFQRLGAVLERWATDG
                     LIPKNPRLVLARAFAAIHPDTYHTVVDGKKHAEVAQWCARHTGFINPGGNWASQAAAL
                     SAHLTECEIAEEPLVRNIFPWFVYRNLVAGSDKVKFVPGHRSRVANGTAEVEAGLKSI
                     QYRQNVIQDRLVDLLRRKFGDSVATEHPTGTGGSADALVLRQDGQFVLYEIKPARTAS
                     DAVRQAMGQLLEYSYRGNGLEAAALVVVSNAHLDRVTEEYLDRLRSQFSLPLEYMQVA
                     DD"
     gene            27401..28183
                     /locus_tag="QEL58_000297"
     CDS             27401..28183
                     /locus_tag="QEL58_000297"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674821.1"
                     /translation="MFGTGAFRTDLPTPTLLECLERAKAEIEVVFSVRGVIFNPGVTF
                     ADEWDWIRSEGEERPDYASEFDDWVELFRAKGTLPEVYFILRASMSLWFEAESAYLSG
                     DRDRAWTALVRCNFFLGMCCSHESHRERSSRAGRNSAKRTLPLREMVLEMLSAMPDKS
                     RATKQEIWDEIVPAMSSFVPPGDVQEGPLDWVRKLGRHPKEQYRESFHRRGKGEKSRH
                     GRSADPAKLLRTWTNNNEEIRQQFFRVVAGPLTTRRKRSSKA"
     gene            complement(28190..29236)
                     /locus_tag="QEL58_000298"
     CDS             complement(28190..29236)
                     /locus_tag="QEL58_000298"
                     /inference="COORDINATES: protein motif:HMM:NF023154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inovirus-type Gp2 protein"
                     /protein_id="HDS1674822.1"
                     /translation="MYRKEENLISQWCDRMLDHREDCVVVGPWRSYPQQIIEVDQAMR
                     GLVRTKGELFAHAVVGRRAALRIHPVVKRIRMLENLDYWAIEEFYASHKLSPYFEIMS
                     REFREFRADVITGGYVDAAAANQWVDKIRQEALHSSFTAALSAQERSARKNARSALDY
                     VDSLYRRYSRLCVVRVDLAYSAEYRQTPEGKSIAPERVKRDLTAWLRALRVKFPSLVG
                     YIWKLEYGPSKSYHVHVMALFNGHEIRQDVAIGKMLGEYWREVITKGEGGYWNCNANK
                     AYYERFNGVGIGMVAHDDVEKRARLKHAILYLAKADYYARLNEPGIGRIFGKGQLPVD
                     YRPGRPRASDRPAE"
     gene            complement(29455..29694)
                     /locus_tag="QEL58_000299"
     CDS             complement(29455..29694)
                     /locus_tag="QEL58_000299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019112376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AlpA family phage regulatory protein"
                     /protein_id="HDS1674823.1"
                     /translation="MNSPSHDRLLERFIRRQEVERRTGFGRSTIYAAIKPGSKRYDPT
                     FPRPVRLSPGTIAWVESEVDGWIQARIAERVAPIT"
     gene            complement(30122..30346)
                     /locus_tag="QEL58_000300"
     CDS             complement(30122..30346)
                     /locus_tag="QEL58_000300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012439057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4224 domain-containing protein"
                     /protein_id="HDS1674824.1"
                     /translation="MSEKLCLTKDEIKALTRTPQKARQLQFLRQNGIRHYIDGHGWPV
                     VLRAAVGIVEPTPAVKAVPWWPNKAGPRPG"
     gene            complement(30348..30554)
                     /locus_tag="QEL58_000301"
     CDS             complement(30348..30554)
                     /locus_tag="QEL58_000301"
                     /inference="COORDINATES: protein motif:HMM:NF025352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4224 domain-containing protein"
                     /protein_id="HDS1674825.1"
                     /translation="MTGDVLSRAEVEEITRSPIRARQLAFFCQNRIPHQVDQYNRVIV
                     LRKAVGAPERLDAPRPAWHSSKDV"
     gene            30627..30989
                     /locus_tag="QEL58_000302"
     CDS             30627..30989
                     /locus_tag="QEL58_000302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010481230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674826.1"
                     /translation="MDELPAALPLEQQIALLRQQLTILRIDLSGKDWLTAEEAAHYCG
                     VSVSQFNARAHEYDLHPRKFMGKKLYERSVLYQAIYGAKAWTRPSATSAPTLAATSPE
                     MKEALARLRRYDDRKGKR"
     gene            31010..31300
                     /locus_tag="QEL58_000303"
     CDS             31010..31300
                     /locus_tag="QEL58_000303"
                     /inference="COORDINATES: protein motif:HMM:NF024139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excisionase family DNA-binding protein"
                     /protein_id="HDS1674827.1"
                     /translation="MTVAEAAEQSACSAKTIRRAIDGGQLAAVRLGQSAKSDRIHRED
                     LEAWWNQCRLRSVAAPRISIRDIPPPPLDTAEARLEKRLGISAKSKSAPRRR"
     gene            complement(31366..31809)
                     /locus_tag="QEL58_000304"
     CDS             complement(31366..31809)
                     /locus_tag="QEL58_000304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005417857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HDS1674828.1"
                     /translation="MSAAIRKTASFGVPWESAYGYVQAVRVNNTIFVSGQLSHTAEGQ
                     LVAPAELGAGGKPANFDTMEAQMRRTYENAQVLLAELGGSLADVVEETLFVIDVPAAF
                     AASGKVRPVVYGQPVPQVASNLIGVSALAFPEQLIEIAFRAEVQD"
     gene            32556..32861
                     /locus_tag="QEL58_000305"
     CDS             32556..32861
                     /locus_tag="QEL58_000305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005416559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674829.1"
                     /translation="MHPPNAFRIHSILPLLALNGAITRLEQVRSTCKNCGLRSSLCEG
                     AGLQTDLKGTTLTCPACGATGLMDEMEIWHHWLEQRRRERLLALFDPEPDEPLEDPK"
     gene            32858..33133
                     /locus_tag="QEL58_000306"
     CDS             32858..33133
                     /locus_tag="QEL58_000306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674830.1"
                     /translation="MNDRTPELLDRLHCCEAAIEVHRAYIKALEYGLRMAVFSHPARE
                     QLSDAWLQLLPNIAAKHRDDGGELFAAAFQQALTVLTEQIGEPNSTR"
     gene            complement(33130..33579)
                     /locus_tag="QEL58_000307"
     CDS             complement(33130..33579)
                     /locus_tag="QEL58_000307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019336568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BLUF domain-containing protein"
                     /protein_id="HDS1674831.1"
                     /translation="MPIRAVVYVSSAGEEIAGDKLGLSNGKLDQIVDDAARFNRNAGV
                     TGVLLFDGGRFLQYLEGPEDGLAVAYSRVLGASSHNGIVELQRGRVGQRRLPFWPMKW
                     LPVEPEELKRVAHADWTRFNQRGDALASYATAMDLLVALVEPYAIAA"
     gene            complement(34060..34674)
                     /locus_tag="QEL58_000308"
     CDS             complement(34060..34674)
                     /locus_tag="QEL58_000308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674832.1"
                     /translation="MSILNVLLTRDHLVVAVDTLAEDARTGVHSAGAKLLLIPQHNLV
                     LATRGSTQFFLRIYELALQASFRADFTMEQLSAELGLVVDQLWPNYEKAAAEAGLPLE
                     QLGTELVLGGWSPKNGRMIATAYAKNDSQRPARVQPIGGQLASPGEPLQAEAPSMAQT
                     DLMAHARLQASYLNEQMVRQVAGGQLLAGFLQKGQAVVKDLGAI"
     gene            34738..34959
                     /locus_tag="QEL58_000309"
     CDS             34738..34959
                     /locus_tag="QEL58_000309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005408975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674833.1"
                     /translation="MSEAIADVLQRLEACETSLEAHRGYLKAFEYGLRAAIITHPRPE
                     ELCRVWTQLLPGIAEKHSGDGGAIYTAAL"
     gene            complement(35319..37082)
                     /locus_tag="QEL58_000310"
     CDS             complement(35319..37082)
                     /locus_tag="QEL58_000310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674834.1"
                     /translation="MKFVSLEIIADGPAGWGSGVLEFGDQVTQLFGDNGAGKTPVVQS
                     IVFALGYPASFREDINERCKCVVLTVVHMDQYYAFRRPFKGAFLIEVSNPLGGDSETL
                     AFHSEADFSRYIFQLWGWADPVLVSVSGAATRLYVSQVLPLFYLDQDEGYSSFYFTPS
                     RFIKDQYAEVMRSVFGLPAKNPFEQRKLRRELQERLERLDLSIVRRQRTIGQLASDVT
                     HPRRSEAELSDELAQVQRSFESLRQGGDARSESEVTLDGEIALLRRRVSALIADKAEH
                     RARLSSFLAISNEIEIEANTLSLNEEARAVFASFDSVCANQACGLFVRSSESYGKSLL
                     YLKDQLKDLERSRQFHEDAVARLDESLVEAERELGKKVQEKELLQTDIHAASLVDATA
                     LVTERLIVLKKDLLLEAQLHEEEQSYVAELDARSRTHDELSNVMRGPGNVDLVLLKVK
                     SALEERIRHWLSVLHAVNMPKQIAIDSDFGVDLVGDNFKAIKGSTKTRLVLAVRTAAL
                     EILLMNDRFSPRFFLLDTPRQQDIKKEDFANYVAALKQLSVAYGVQIVFSSSNYRYDP
                     DDRDQEWPPRFEGVEQAMYLG"
     gene            complement(37079..37558)
                     /locus_tag="QEL58_000311"
     CDS             complement(37079..37558)
                     /locus_tag="QEL58_000311"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674835.1"
                     /translation="MDFDDFFDAIERDGLELSFSNTEPVPPARLSNEAMFHLPLIAIT
                     ILMICKGRSKPKVDSIGQLIGECFEETFAGFRGSAQHLGWSAALRLRTVQALTFLEAA
                     GLVSVRAGDRAIAATAEGQRVVGVALKQDGDLAFNLYRMDRSYRNLRNERQMRINLQ"
     gene            complement(37558..38838)
                     /locus_tag="QEL58_000312"
     CDS             complement(37558..38838)
                     /locus_tag="QEL58_000312"
                     /inference="COORDINATES: protein motif:HMM:NF025495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4297 domain-containing protein"
                     /protein_id="HDS1674836.1"
                     /translation="MAGSDNNKDLQLHQVAPTEQVGRDTIARYQAQYRAAAMECLKLL
                     DRQSIDRVYCEFHDDFVSRRSVGGAHFYRFFQVKTVGKRNHLWSIADLFGIPKSKKKK
                     VSKKKVCPTPAVATNDSAGNVDDSNDLSSRIADSFLGKLLLHTVRFGESCEQVSFLTN
                     ANLNDEVELVFAALEGGISEPNDVLSMLSEHFNSAYKIADPLCPGEIKLRLSKLSIEP
                     GLTLLQPGGGDYEALASKAIYTYSEIDLTHSESAQIAANLVALVERKSYPKMAQVPKM
                     QTLEQLAGIGLEDLLGLLSISASGYLQLLSGGDEGALKSASIIQRKLETAGAAQPVID
                     SACQWKVGWDNWYRTYRHLDEVDMEFILQDIARVRERWVRGEVSFVAIRGEALEIVTK
                     WASSALGSMLTKELVLGGVLAELVRSESMRGGVS"
     gene            complement(39584..40291)
                     /locus_tag="QEL58_000313"
     CDS             complement(39584..40291)
                     /locus_tag="QEL58_000313"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674837.1"
                     /translation="MNETTEGKYPMDPSIAELKITRRPGQSDEELHAEQLADGVNSNA
                     FLALLFAQHSGFAKGSEIGELVEATQQAVERAKRGGTEQADSLLTSQAIALNAVFLEM
                     SRRAALNMGSHLRATETYMRLALKAQSQCRSTLESLAEIRNPRTVAFVKQANIANGHQ
                     QVNNGPESPGQVSERSGQARPRGRENVQNVLLEEKANGQWLDPRTSTAPSAGNPDLAS
                     VGVLNRTKDRGREGGDE"
     gene            40831..41022
                     /locus_tag="QEL58_000314"
     CDS             40831..41022
                     /locus_tag="QEL58_000314"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674838.1"
                     /translation="MDWKTNNYDPQKSWDTMKSEAFNQRYPEGKAGGRSIALAIIAVP
                     LGLAAVAGLAYSVLTFFGG"
     gene            complement(41019..43337)
                     /locus_tag="QEL58_000315"
     CDS             complement(41019..43337)
                     /locus_tag="QEL58_000315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674839.1"
                     /translation="MARFDGIPVEEPVKNKPRFSGELVEPAGSTAAATSAGQRSQVAP
                     DGWRYGAARDAAFGARSVIQSAGSLLGVVGGDAFNNYLVNPVARAVGAQEARPYRQEA
                     AALADSLGLPKAQTAGDRIWGDVGEAVAGTGLTMGIGGGINMLANMGRQSAAPVANRL
                     ANFLTAQPGLQTASAITGSAAASATKEAGGSQRNQLLAGLAGGFAPGTLSGLASLATA
                     GRVSATGTVPTAAAGVARRVTRGNDASGVQSMIDDFAASGTSPSVGQATGNRSASALE
                     TYLGNTPGGSGQIAQRASDQAAAARRATDDLSNRISAGGADLTPTQVGTNVQQGIYGP
                     GGFVDRTQSVSDRLYSELDRHLPAGEMVPVSNARGALQEINAAINGAPELSHLFDQAA
                     LKQIERALVSDTTGGASVLSRPGMRENAAAYRQYLERQAQEASERNARRQSLGMTVME
                     PVPTRADIEQNLNSTLGNMADGTLPYQALKELRSKVGKQVGATFLTRDAAHAEWKKLY
                     AALSRDMEAAATTPEAKKAFAMANNYYRLREQRLDAIGKIVQKEGGPEAAYQAMFTGA
                     RNGATPLKRVMDSLPAQVRADVSASFLQRMGRASKANQNAAGDAFSMETFLSNWADIS
                     PEAKKQLFSNARFGTDYVQNVNKLARMADSIRSGSKVFANPPGTAKQTALGVTLGGTG
                     LIAGQNVLQGNLGQAAITVASTLALAGANNLLARMMTNPKAVRWLARNTERDSGDIAG
                     QINTLLQIGKEEDDDELVELAQRLKAQAAGGR"
     gene            complement(43341..44810)
                     /locus_tag="QEL58_000316"
     CDS             complement(43341..44810)
                     /locus_tag="QEL58_000316"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674840.1"
                     /translation="MANALTGNFGPLAAIGYVQEQGDIGRQRGQQNRLNMLAGQSYSA
                     TAPQDQSSLLSQMAQISPQAAQAQQQQFQSQEDRNRSELFGMARGWKKIPSEHRQKYY
                     DNFLSKRLNAMGFGEQPAYNEAGIDGVADQIIAAFGQNLGSDTSQNKVVGGALVTPDG
                     RVVYEAPTNAHVIDVPDGMGGSMKMIWDPRSRQLSPLPAAAAHRGQSGPAAAPTVFRG
                     ANGEIVDMSKVTEPGLRESIMQNPGEWGLVPDGGSAEIPVRNVSSFGGLGYSPPKQRE
                     APQGYVYQADTLKPIPGGPADNSSPQAIATGEQSLRKEVTQNLKEDQGVLSMYRNVQA
                     AASQPSAAGDLSLIFAFMKMLDPGSVVREQEFANAQNAAGVPDQVRNAYNKAISGQRL
                     NPTQRQDFLNQASQLAKNAEGRITGTTRKYQEIARQYGYDPVRGTGMADFSGVTSSVS
                     GGSEPAASTARPQTDADFKALPSGSLYIDPDDGRTYRKR"
     gene            complement(46019..46495)
                     /locus_tag="QEL58_000317"
     CDS             complement(46019..46495)
                     /locus_tag="QEL58_000317"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674841.1"
                     /translation="MHSTTQDRAQRSPEGDASYGQAQPKKNTDRRRQKLVGRSKGAPF
                     LMLEHRISDSPEFGQLSGNAVKLLLELARQYRPGKNGDLSIPWSMLSTRGWRSKATVH
                     GAKLELLAAGWIIETRKGGKNMCSLYALTYYAVDESEKHLEPPTVTPLNLWRNRNG"
     gene            complement(46525..46875)
                     /locus_tag="QEL58_000318"
     CDS             complement(46525..46875)
                     /locus_tag="QEL58_000318"
                     /inference="COORDINATES: protein motif:HMM:NF024784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HDS1674842.1"
                     /translation="MWEAVHGPVPKTMEVDHLDGDSSNNKLDNLQLVTGSENRRLQRA
                     RSIAKYGSPSSQCKLSVAEVEAVLRTVGIVPTKVWARRYGVNSSTIRCIRKKKTWRHV
                     DAGTTCRAKRPKRG"
     gene            complement(47048..47743)
                     /locus_tag="QEL58_000319"
     CDS             complement(47048..47743)
                     /locus_tag="QEL58_000319"
                     /inference="COORDINATES: protein motif:HMM:NF022022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage antirepressor N-terminal domain-containing
                     protein"
                     /protein_id="HDS1674843.1"
                     /translation="MATGIVHVEFHGAELIGRLHQGQPFVAMRPIVEGMGLDWSKQLE
                     KLKSHPVLARQLSTLRGMVAGDGKGRQMQALPLSRLPFWLATANPNKVKAAIRERVIL
                     FQEQAADVLAAAFLSSGTRQDAAMAKRVAGTVMCRILHDTLVGLGRDPKGYDYATEHR
                     LVNHCITGVFHGVSEDSLSTDQLKLQQELRMQNAVWIGQGMAYRDRKPLLEQHAVAWC
                     RTQEIGWEAPNAS"
     gene            complement(47743..47973)
                     /locus_tag="QEL58_000320"
     CDS             complement(47743..47973)
                     /locus_tag="QEL58_000320"
                     /inference="COORDINATES: protein motif:HMM:NF017717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AlpA family phage regulatory protein"
                     /protein_id="HDS1674844.1"
                     /translation="MTSDAIRLGRVAAQGRTLMRLPEVIAACGMSRSLIYKMAKEGRF
                     PRPIRVAARLSAWDSEAVRCWIDSHCEEGRAA"
     gene            complement(47970..48224)
                     /locus_tag="QEL58_000321"
     CDS             complement(47970..48224)
                     /locus_tag="QEL58_000321"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674845.1"
                     /translation="MSGFDFSDLSADQRRLLDLGGWTADHPHAETKPGRKDAWGLIER
                     GLLLAVSVRRRDSYGSYSLTEYRVPDTARRAWAQHKETSV"
     gene            complement(48221..48421)
                     /locus_tag="QEL58_000322"
     CDS             complement(48221..48421)
                     /locus_tag="QEL58_000322"
                     /inference="COORDINATES: protein motif:HMM:NF024139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDS1674846.1"
                     /translation="MVISTNALDPLLHRIPDACRRLSVSRTTLYELIKAGEIRSVKIG
                     TRSLIPEVDLQRVLSSRLEDVR"
     gene            complement(48580..49488)
                     /locus_tag="QEL58_000323"
     CDS             complement(48580..49488)
                     /locus_tag="QEL58_000323"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674847.1"
                     /translation="MARKASGKGIPSWFELEKYNYLSDLDAAGWLLLLDRLIPLMKIR
                     VPDEITGEGRDGAVRLLTERFIALQEGKFSTGRSWRIRSYLRPIHGFGFGTVQALDNH
                     AVAWMGATLARLPGGEKFMRSLKQAEDARMAGDYSKANRLGRSLGDQREFGDKPFFVT
                     LRDSDLLSERGSSLTPNRAISVRLSAPDDIIVEDFKRWLADMRKLDHHVAAKRSFGKA
                     DFVTWIERGYVPLALIEAWAVITGEKPTLGALCETVYPGKYEVDDIRKTYRPGMRAWL
                     TAATAEGLAAQAARDLEANGQEEASG"
     gene            complement(50101..50502)
                     /locus_tag="QEL58_000324"
     CDS             complement(50101..50502)
                     /locus_tag="QEL58_000324"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="S24 family peptidase"
                     /protein_id="HDS1674848.1"
                     /translation="MSRAISQAITSSNGGGLVSQSTAMEAVCVGDCSAGERTGASVAY
                     VSVKDDLNAPALEAGDVLLVDLGVTRWGYDGVYVVDINGEAVVRFVQDRGGGGLYVYC
                     LSLMDQGQVLPRESVSILAAVKAVTKIRRVA"
     gene            complement(50499..50699)
                     /locus_tag="QEL58_000325"
     CDS             complement(50499..50699)
                     /locus_tag="QEL58_000325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674849.1"
                     /translation="MKERLTELRHALNDAAQAVWDIQGVTDLLLNSGEMGESAIPPAV
                     RAVVNLVNERATAVAKKIEEVL"
     gene            complement(50714..50971)
                     /locus_tag="QEL58_000326"
     CDS             complement(50714..50971)
                     /locus_tag="QEL58_000326"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674850.1"
                     /translation="MAASEVTIEAAYGGIPVQDNAPTYKICAGIDTLHALGDASLYVS
                     FVRSFFKTCMENDSVPSFDDLAVLDHLLEQSQALRRASRVD"
     gene            complement(51324..52538)
                     /locus_tag="QEL58_000327"
     CDS             complement(51324..52538)
                     /locus_tag="QEL58_000327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019338914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrase arm-type DNA-binding domain-containing
                     protein"
                     /protein_id="HDS1674851.1"
                     /translation="MLTDTKLRSLKPKANPFRVADANGLCIEVRPSGAKVWRYRYRYL
                     GKASIVTLDEYPSMSLQAARVERDRLRSLLRGGANPAQVARVEKAVQGERSANTFGAI
                     GLELLAKRTKEGLSPGSVVRERRLIEKDLAGLADLPIGDITAPVLLAALRKLEQRGVV
                     ETAHRARAHAGRIFRYAIATGRADRNPAQDLAGALEQPQTKHFASVTDPAVIGGLLRA
                     LWGYQGALVTQAALKLAPMVFVRPGELRQAKWADIDLDAAEWRYVTSKTKTPHIVPLS
                     EQAVEVLRELYPYTKRSEFVFPGVRSSLKPMSENTMNAALRNLGFDSDTMVGHGFRAM
                     ARTVLDEVLGYRPDYIEHQLAHAVKDPLGRAYNRATHLPERRKMMQAWSDYLDQLRVA
                     EPNVLAFKAKRA"
     gene            complement(52715..52790)
                     /locus_tag="QEL58_000328"
     tRNA            complement(52715..52790)
                     /locus_tag="QEL58_000328"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(52755..52757),aa:Ile,seq:cat)
     gene            complement(52831..53148)
                     /locus_tag="QEL58_000329"
     CDS             complement(52831..53148)
                     /locus_tag="QEL58_000329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005419584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674852.1"
                     /translation="MVVDACGRGGSDAQGCNFPPLLDWDDVMRDERDDPLGFARRATL
                     ALLTRSGAGLLAGFSGDNQQGLEEVSRMVALFQAYLRRQVWLAEAAERRLGRISEALA
                     AAG"
     gene            complement(53729..55582)
                     /gene="rpoD"
                     /locus_tag="QEL58_000330"
     CDS             complement(53729..55582)
                     /gene="rpoD"
                     /locus_tag="QEL58_000330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017157069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoD"
                     /protein_id="HDS1674853.1"
                     /translation="MANERPAQSEIKQLISKGLEQGYLTYAEVNDHLPDDMVDPEQIE
                     DIIGMINGMGIDVHEVAPDVETLLLNDGNTGNREVDDTAAEEAAAALSALDTEGGRTT
                     DPVRMYMREMGTVELLTREGEIAIAKRIEEGLSQVQAALGQFPVSVESLLNDYEAHKE
                     GKKRLAEVIVGFNDLTDEAPAPAAAAADDSDDADADGDEDEDDDVEGGEEEAAPTGPD
                     PEEVAARMQALSDAFTAFKKAATKGDKKNLPRLREEMSAVFVTLKLPLPLTDVLTKQL
                     RDTMADIKSHERRVLNLATVTARMPRKDFIRSWEGNQTNLEWVEDALKRKQKWSSALR
                     EVKDQIIAEQQATIDIEKLTQLDLEELKEISRAMAYGEAKARKAKKEMVEANLRLVIS
                     IAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQA
                     RTIRIPVHMIETINKLNRISRQMLQQYGREATPEELAKEMDMPEDKIRKVMKIAKEPI
                     SMETPIGDDEDSHLGDFIEDTNVESPIENTTNINLSETVRDVLAGLTPREAKVLRMRF
                     GIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSEQLRSFLDID"
     gene            complement(55673..56113)
                     /locus_tag="QEL58_000331"
     CDS             complement(55673..56113)
                     /locus_tag="QEL58_000331"
                     /EC_number="3.1.1.96"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006453176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-tyrosyl-tRNA(Tyr) deacylase"
                     /protein_id="HDS1674854.1"
                     /translation="MLVLIQRVSQAAVHVDDEAVGQIGPGLLALVGMEPGDTEAQLQR
                     MAERLLGYRVFADEAGKMNRSLRDTGGGLLLVSQFTLAADTRSGMRPSFTSAAPPDEA
                     ERGFNRFVGICRENHAPGVETGRFGAHMVVSLVNDGPVTFLLRP"
     gene            56176..57096
                     /locus_tag="QEL58_000332"
     CDS             56176..57096
                     /locus_tag="QEL58_000332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005419590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lauroyl acyltransferase"
                     /protein_id="HDS1674855.1"
                     /translation="MNPQRKARLVYRATTLFARLPWPLLRGAARALAWAWISLNARES
                     RVTRRNLELAYPELDATARDRLHRELLRSTALQAIETLRLWSQKPADNLRLHLKQRHG
                     EALYDAALASGQGVIVAAPHFGNWELLNQWLASRGQIAIVYKPPEDEASDAFLQLVRG
                     GQNVQQVRAEGPAVRQLFKVLKDGGATGILPDQQPKAGDGVFVPFFGVQALTMTLVNR
                     LAERTGATVLYGWCERIGPDMEFALHIEPTDPAVADPDPQVAATALNAGIERIARRDP
                     AQYQWTYKRYTLRPAGSGEEDPYATEEHPH"
     gene            57180..58313
                     /gene="ribA"
                     /locus_tag="QEL58_000333"
     CDS             57180..58313
                     /gene="ribA"
                     /locus_tag="QEL58_000333"
                     /EC_number="3.5.4.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005411182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase II RibA"
                     /protein_id="HDS1674856.1"
                     /translation="MSASPGPAMPASSLFGDPAAIRCERAVAELRAGRPVLLHDGQGQ
                     RLAVIALDSATASSFAAFASAARERHYLFLTATRARVLGVEAPEGARLPLAGIAFDAL
                     PSLGYLREPGPMPEGWSAGDAFDAGAVELARLGLLLPAMVAVRLDAGDATFDGAAEVA
                     LCDLAEGAAHAAHDYELVARSPVPLRDVGMTTFAVFRGGVAQRDQVAIIVGEPDLSAV
                     VPVRVHSSCLTGDLFGSLKCDCGDQLRRGLRKLKELGGGVLLYLDQEGRGTGIAAKMR
                     AYGYQHDGLDTIDADAQLGFGADERRYGSAVAMLHGLGISRVALLSNNPTKAQRLRNA
                     GIEVLDCIPVTGEITAENEHYLRTKADRAGHMLDVDALIQAAQ"
     gene            58389..58889
                     /locus_tag="QEL58_000334"
     CDS             58389..58889
                     /locus_tag="QEL58_000334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014648556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PH domain-containing protein"
                     /protein_id="HDS1674857.1"
                     /translation="MTDASIPAPPASDWQVLPQRAARLAALEGAFGGLFVPGLPLAAA
                     AWFFDLPGGLWTAALGLLIGIAFGAWLGHRRLVRTRWRLDAQGLGLRRDLMWQLETRI
                     PISRVQHLDLRRGPLERRAGLATLIVHTAGTRMSAVTVSGLDEADAERLRDTLSHQLD
                     QDADAL"
     gene            58886..60424
                     /locus_tag="QEL58_000335"
     CDS             58886..60424
                     /locus_tag="QEL58_000335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005419596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PH domain-containing protein"
                     /protein_id="HDS1674858.1"
                     /translation="MSLPPPLPASLPDGGEDHRLHPWSWLFVLLMQLRHYFLPLIALL
                     VFGQRGDRDPMWAQLIPLSAIAVLVLVSVLQYLSYRYRIGNDAITVRSGLLARNRREI
                     PFARIHNVEVRQNPLHRLFGVAELRLESAGGARPEAEMRVLKLDQALALERLVRQRGQ
                     APQASEAIAVADIADTGNEHVLLRLSSWDVVRMGLLSNRGWALAIAAVGVLFQTVPRP
                     VMDDALQRGGREAFGYASHLHPGVAGAFLLAGTALLLGWLALRVLSVVLTLLRYHGFT
                     LSEQERRLTVSAGLLSRTRSSVARRRIQAWTLRESTLHRWFGLRQLRIDSAAGGPSRD
                     EDRALRELAPLASRMRCEQLVQHLLPQLQWPPAQWQSIPQRGWWRLCLGALLLAPLLA
                     AAAYWRWGPWGLVVLAWMPMALLVAHRQMARMGWYLDDHYVAVRGGWWKRWWRWAELD
                     KVQGLRLQRSPLDKLLGTSSLQLDTAGAHGDVALTLHYLPHEQAQRVMEQLAAALARR
                     KLRW"
BASE COUNT        11327 a        19753 c        17963 g        11381 t
ORIGIN      
        1 cgctttgcag tgcggccggt gccgcagtgc gcgtggcggc cgtgcgtgca cggtccatcg
       61 ccaccgccag ttgctggcgt gcgagcagtt gttgtgcctg caccacttca ggtgtcggca
      121 ggagcaccgg tcccggtgcg ttttccggtg tagcaggtgt ggtcatgcaa cctccatgga
      181 catcccgccg ccgcacggat tcagctggag cggcagcgga actgcgcacc ctatcctaaa
      241 aacaaggcgg atgggtgacg gtgcggcgcc cggccgcagc accgcgccgg ccatacgctt
      301 ggattcccgg tgccggggcg cattcctgaa cccgttgccg tgtgcacggt tcatcgccat
      361 gaccgccccg gccgccgccc gggggctcac gccgcgcggc gtgccaccgc caccggcccg
      421 gcctgcaggc ggaagcgcga caccgccacc gccagctgct cggcctgctc ctccatcgcc
      481 cgcgcggcgg cactggcttc ctccaccagc gcagcgttct gctgggtggt ctcgtccatc
      541 tgcaccacgg tctggttgac ctgctcaatg ccggccgact gctcgcgcga ggcggccgag
      601 atctcggcca tgatctcgtt gacccgcccg acctggccga cgatctcctg catggtgcga
      661 ccggcgccat gcaccagttc cgcgccggcg ccgacctgcg cgaccgaggc gtcgatcagc
      721 tccttgatct ccttggccgc gccggccgag cgctgcgcca gcgcgcgcac ttcgctggcg
      781 accaccgcaa acccgcggcc ctgttcaccg gcacgtgccg cttccaccgc ggcgttcagc
      841 gccaggatgt tggtctggaa cgcgatgcca tcgatcaccg agatgatctc ggcaatgcgc
      901 tgcgacgagg cctcgatctg ctccatggtc tgcaccacct ggctgaccac ctgtccccct
      961 tcgctggcca cgccggccgc ggaaccggcc agtgtgttgg cttgcagcgc gtgatcggcg
     1021 ttctggcgca cggtggaggt cagttcctcc atcgacgcgg cagtctcttc caggttcgcg
     1081 gcctgctgtt cggtacgccg cgacaggtcg ctgttgccgg ccgcgatctc gccggctgcc
     1141 aggcggatgc tggccgcgga ctgctggatc tgcccgacga tcccggtcag ctgctgcacg
     1201 gtgctgttgg cgtcgtcgcg catcaccgcg aacaccccgt ggaagtcacc ctgcatgcgg
     1261 gcagtgaggt caccggcggc gatcgcgcgc agcagcgtcg acagctcggc caggttgtgg
     1321 tcgctgacct gcatcatggt gttgagcgtt tccaccatgc ggcggaagtc atggtcgaag
     1381 cgcagcgcat cgccacgcac cgcgaaatca ccggcagcgg cggccgcggc cagctgctgg
     1441 atctgatcgt tgatcgcggc caggttgctc ttggtggtgg ccatcgcggc gctgaacacg
     1501 gccttctcgc ccggcagcgc ctccatgtcc acgctgaggt cgcctacggc atagcgctgc
     1561 atcacttcga ccaggcgctg ggtgacggca ttgctggagg ccaccagctg gttgctgtcg
     1621 gccaccatgc ggccgtactc gcctgggaac gccgacgcgt ccatgcggta gctgagctcg
     1681 ccggcgtcat gacggcgggc catttccgcc tgcgcggcca tcaccgcctg cagctggccg
     1741 cgcatgccct gcatcgcctc cagcaggcgt cccacttcgt cattgctgcg cgccggcagg
     1801 gtgctgtcca acttgcccgc ggcgacatcg ccagccacgc gcacggcttc ggccagcggg
     1861 cggatcgcca gccggcgcag cagcacgtag acacccgcgc tcagggccag ggccgccacc
     1921 acgccgacca gcagggtcag ccacagcagc tggcgcgcct cggccacgat caccgcatgc
     1981 ggcatcacca cgcccagcgc gaaacgctgc ggggcgtcgc caacgcgcag cggcacgtac
     2041 acgcgcacgt tgccggcggc atccggggtg aaggcttcga agcggcggtc ggcggcaatg
     2101 tccgccagca tgctgcgggt cagcgcgtcg ctgcgcggct tgccgatctc ggcggcgttg
     2161 gccgaggcca gcaccacgcc cttgggcgaa agcagttcga cacggccggc gcccatcggc
     2221 gtcagcgtgg ccaggtgctt ctgcagcgcc gccagcgaga agtcgacggt gaacacgccg
     2281 aggaaggtgc ccttctcgat gatcggcgtg ctcagtgtgc tcatcagcac ctgctggcca
     2341 ccgatgtcgt aggcataggg ttcactgacc ttgggcagct tgtcgcggct gggatccatg
     2401 taccagtcgg ccgaaccatc ggcggcttcg gtgtagtccg tcatcggcga ctgctgcggt
     2461 gcgccgtcct gccaggccca gtagctcatg tagcgcccgg tggcatcgtg cgcctcggtg
     2521 ttgacgaact cggcgtcctt gccgtcgaac gcatcggctt cccacatggt gctcttgccc
     2581 agccattccg ggtgggtgcg cagctgctcg ccgagcaccg ccgccaggct ggcgcggtcg
     2641 ggtacatcgc cgcgcgcacg ctgggcgagc acggcttcga ccatcgcgtc gttgctggcg
     2701 aaggccgtgc ccagatcggc cgcgacctgg cgcgcttcgg cgttggcttc gctggtcatg
     2761 gtctggcgcg aggcatcgat caggctggcg ctggcctggc gatagatcag gaacgcggtc
     2821 aggccgaagc acagcagtgc gatcacggcg gtgcccagca tcagcttgtg ggcgatgctg
     2881 cccgggcgtc gggcagcggc ggaacgggaa gaaggcatgg aagggtccgc taggcagttc
     2941 aggatgaccg gtgccgcgag ggcaccgcgc aggcgcgcga tccgtcgcgc aggccgccgg
     3001 ccgccggggc atgcccggcg ctggaagcgc accgggttag cggccgcctg ccaacgaggt
     3061 tgaggcggcc cgcctgcaca ttcctgaatc tgctcaggga cgggtcagca acccgccccg
     3121 ctgctgccct actcggctac gcgatccttg atccactgcg cccgcggcag cacttcgatg
     3181 ctgcccgcgg cgtactgctg cagcacatcg tccgggccga accgcggttg ccagcccagc
     3241 tcgttgcgga ggcgggcact gtcgtagacg cggtcgatgc tcatcggcag cggccagcca
     3301 cggcgttcga actcggccag cagctgcggc acgcgccgcg ccagcacgtt gcgcggctgg
     3361 gtggccagtt caaggcagtc ctcgcgccgg aacggcgtcg gcgcacaggc gatgtagcgg
     3421 gcgaaggcgg caccgtcatc aagcagcagc gcggcatgcg cactggccac gtcacgcgcg
     3481 tcgataccac ggtgcaggcg gaacatcgcc atgcgctcgg gcggctccgg gaagcaacgg
     3541 cccatgcgca gcacgcgcac gctgaagccc ggtgccgcgg cggacatggc cagggcttcg
     3601 gcctgcagct tgctgcggtg atagatcgtg cgtggcaggg gctcggtgtc ttcatcgatc
     3661 cagcggcagc ctcccgccac caccgcatgc ccgtacagcg cggtggtact ggtcagcacg
     3721 aaccgccgcg caccggcctc gcgcgcggcc tgcagcaggt gcgaggtggc ctccacgttg
     3781 atctgctgga acaccgcatc cggcaccagt cccacatgcg gtgcgtgcag ggcggcggtg
     3841 tggatcactg cgtcgacgcc acggacagcg cgttccacgg cctggcgatc ggtgacatcg
     3901 gcgatgatgc gggtggtggc gaacgggctg cgatccagcc ccaccacttc gtgggcggcc
     3961 gcgagtgcgc cgaagatcgc acgcccgatc cgtccggaac tgccggtcaa cagaatcttc
     4021 attgagtcca ttcgctcgaa gcgcccggga actaccggga tgattcgatt ctaggcaagc
     4081 ggcatgtcgt ctgcgatagc cggatgttgc aaaaacgcgt tcatcgtggc gacgttggcg
     4141 gtgccagcag ctgccgcgcg atgaacagcg gatcatcacc gccgggcaca tccggcgtga
     4201 tgccggttcg ttcccagttg ccgccggtac gcaggttgat cggctgacgg tccggaatgc
     4261 tgatctgata accatcgggc agctgcacag gatcatcgaa catgtgcgcg gcgccaccgc
     4321 tacggctacc gacgatgcgc gcgcgcccta ctgcctgcag cgagtacgcg acgaactcgg
     4381 ccgccgagcc ggtgcgacgg tcgatcagca ccaccagcgg cttcaggtag ggcggcaggc
     4441 tggccggcgg caaccgcacc gcggtgcgcc gcccgcgctg ttccagcgcc tgtacctcgg
     4501 tgattcccgg ctccagcagg gtgcgcacca gcaggtccgc gctgccatca tcaccaccgc
     4561 cgttctggcg caggtccagt accaggccat cggtatcggc cagcaggctg aacgctgcca
     4621 ccagttttgg ccgggccagg tcgagcggat agaaggtgct caggcgcagg tagccgatgt
     4681 tgccctccag cacccgcacc tcgcgcacgc ccgcaccatt gccgcgcgcg tccgcacgcc
     4741 aggccatcag ccagtcgtcc tggccggcat cggcgtccac gcgttccaca tggaagtggc
     4801 catcgaagac gtccagatcc tggttcaggc gtgcgctgaa cgcttgcggg tccgcgcagc
     4861 tgtccgcata gcgccgctgg ctggaccagc cgcgtaccgc tgcggcaatg cgggcacctt
     4921 cggcctcatc caggtactgc gcctgtattg cggtggccgc ggcctgcagc accgcatcct
     4981 gggacgggca tgccgccgcc agcaacgcac ccagcatcca cgaaaccgcc atgaccctac
     5041 cccgtattga tgatatataa gcgcttatat atcatcgcga tcatggatct ccaacacgcg
     5101 accctgggga cgctgctgcg cgccctgctc gatcagctcg acccggccgt cgaacaggcc
     5161 taccgcgatc tgcagctgga ctatcggccg cgctacaccc cggtgctgcg cacgctgatg
     5221 gcgcagggcc cgtgccgcat caaggacctg gcattggcct gcgggctcag ccattcggcg
     5281 ctcagccaga ccgtggcagc gatggtgcgc gacggctggc tgcacagcgt catcggtgaa
     5341 gacagccgcg agcgcatcct gcagttgagc ccgcatgcgc tgcgggccgt gccggcgctg
     5401 caggcccaat ggcaggccac cgcgcatgcg gcacgcagcc tggaggccga cctcggccag
     5461 tcgctggaac aggtgctgcg cagcgccttg caggcgctcg aacaacgccc cttcgcgcag
     5521 cgcctgcgcg aggcacgcga aggctgacac ggttcggcgc cgctgtggcc gatggcggcc
     5581 ggccgcttga acccggtgcg caggccgcgt gaagacaact gcaaggatgg cgacctggac
     5641 ttagcgcgcg atggccaagc atggccgctg tcgccgacga cggcgacgcc cacaccgcag
     5701 gaggattcac atgactggcc agaacccgcg cagctccacc cggggcttcg cctcgatgga
     5761 cggggacaag caacgtgcga tcgccgccaa gggcggacgc gccgcgcatg cctccggcaa
     5821 cgcgcatgaa ttcagcccgg acgaagcccg catcgccggc cgcaagggcg gcgaggcgat
     5881 cagccgcgat cggcagcaca tggcggcgat cggccgcgaa ggcggccacg cacgccacgc
     5941 caacgcacgc cagcaacagc aacaggcatc gctcgaccca gtcgcaaagg atccgcaacg
     6001 ccaacaggga tgatcgctgc gcggtcagtg cgcaaggcga agtcggcgca ggccgatggc
     6061 cgcaagcagg gccagcacgc ctgccaccgc catcgcccac ccgaagccac tggccatcgc
     6121 actgcgatac cacgccacca cctgcggcgt ggagtacgac gagcccgggt gcagaatcag
     6181 cccgcgtgca tgggccgcca gccctggctg cccggcggca agtgcggacg cggcaaactg
     6241 gcggaccgca cgcaggccca tcaggctgcc cagcagcgcg atgcccaggc tcatgcctgc
     6301 ctggcgcaat gcattcatcg tggctgacgc gatgcccgcg cgctcggccg gtacctgggc
     6361 catgaccgcc gtgccggtgg caggtaccgc cagccccatg ccgatgccca gcagcatcag
     6421 caaggcgctg gcctgcccgg gcgacgtcgc aggctgcaac gtggccatcg cgcacagcgc
     6481 cacggcgacc agcacataac cgcagaccag cgcggtgtgc agccccacgc gtaccaccag
     6541 gcgaccgaac agtagcgaga caacgcccat caacaggaac tgcggcacca gctgcgagcc
     6601 tgccgaggct gcgctgagcc cttgcgcctg ctggaagaac agggacagga aaaacaggct
     6661 cgcataggcg gtgaatccca gtacgaacga agccaggttg agcatgccga aacggcgatc
     6721 ggcaaacagg tccagcggca gcagcgggcg tgccacccgg cgttcgacca ggccgaacaa
     6781 caccagcccg gcgccggcga tgcccagcgc cgacagcgtt gccggcgcca gcaggccctg
     6841 ctcgccgatc gcgatcaggc catagctcag cgcacccagt gcgacgacgc tgagcagctg
     6901 ccccgccggg tccagcgcgg catggtgtgg gtgccgtcgc tccgggatac cccacgcacc
     6961 gagcatgagg gcaagcaggc ccagcggcag gttgatcagg aagatgctcg cccagccggc
     7021 gcgctgcacc agcacgccgc ccaacagcgg gccgagtacc agggccagcg cactgaatgc
     7081 cgaccagccc ccgatcgcgc gcgcacgctg gcgcggatcg gggaacgcat ggctgaggat
     7141 cggcatggcg ctgggaatca gcagcgcacc ggcgatgccc tgcaccacgc gcccagccac
     7201 cagcgtctgc aggttgccgg cgcaggcgca cagcaacgac cccagggtga aggtggccac
     7261 gctgagcagc cacatccgcc gatgcccata gcgatcgccg agcgggcccg ctgacagcat
     7321 cagggccgac aatgcgatgg catacgcgtt gatcacccac tgcaggccgg ccatgtcggt
     7381 gtccagcgcc tgctgcaagg tcggcagggc gacgttgacg atgctgatgt ccagcgaggc
     7441 gaggaaggtg ccgaggtagg ccgccagcac cagggccggt cgtcgcaagc gttgcatgtt
     7501 cggatcccgg gggaggatgt gcccgcatcc tagccactga ctgaccgtcg gtcaatgacc
     7561 ggcggtcagt cactcccgag gcagggctag aatggccgcc gacacacccg gacccagcca
     7621 cgatgcagac ccccgctgcc gccaggcctc gcaccaagcc cgccgaaacc cggctggaag
     7681 aactgatgga cgccgcccag gcgctgttcc tgtctcaggg cgtggaggcc accaccgtca
     7741 gtgacatcgt ggccgcagcc gacgtggcca agggcacctt ctatacctac ttcgcctcgc
     7801 gcagcgagat cctgcaggca ttggcgcagc gctatacccg gcacttcatc gaggacgtcg
     7861 accaggccgt gcagcagcac cccgccgctg atggcgtggc acgcctgcgc gcgtggatcc
     7921 gcgccaacat cgagatctac gtgcgcacgc acgccgtgca cgatgtggtc ttcgcccatc
     7981 accatcacca ccagcgcggc aatgccgagc gcaacgcgat ccagcggcag ctgctgtcga
     8041 ttcttgaaac aggaatgacc gccggcctgt ggcagttgcc gtcgccgcag gtcaccgcct
     8101 cgttgatcta tgccggcgtg cacggcgcca ccgatgacct gatcgccgca cccgcgcagg
     8161 acgccgacgc cttcattgcc gccgtggtgg acgattgcct gcgcatggtc ggcgtagcgc
     8221 cagccgcgac gcatccctga cccgcaaccc gccgctcagc aatgggcgag gatgttcaac
     8281 agccttccga acggatcgcg cacgaagaag cggcgcacgc cccagggttc atcggccggg
     8341 ccgtactcca gcgcgatgcc ggccgcgtgc atgcgctcca gcacctcctg cagattgtcc
     8401 acctcgatcg acaggtccgg cactgcggtg ccggagccgc cttcactggc aaagctgacc
     8461 tgcgccaggg cactgccctg cccgccgtgt gtaacgatcc agccgtgatc catcaccacc
     8521 ggcatgccga gcaggtcgcc atagaaggca gcggcgcgtt gcggatcggg cgtggcgatg
     8581 ttggcaacga cgcgcctgac agccatggca tttccctttc ccggaagacg caccgagagt
     8641 accgcatcga tgccagcgtc accccctgca acagaagagc cccgtcgatg acggggctcc
     8701 aggcggcata gaacttaaaa ggcgcgactc acacgcccat gcacaggtcg accacgcagg
     8761 tgttgtaggc ctgctggcac tcaccggcat ccacaccgct ggccaggcac atctgatagg
     8821 cccgccagca cggcttgtcg cagggctcga ccggccctgc caccgccacc gaaccggtgc
     8881 aggccaacgc gaacaccgca ccggcgacca tcttcttcaa tgcacgcatc gtcatcactc
     8941 cttgataagc ctggtgagcc caggcgggcc caccgtagcg gggacaccgg gaggcgaggt
     9001 gaacacccgc gtcacgaatc cttaaccagt tcataaaatt tccttcacac gactgggggg
     9061 catcggcctg ccttggcgtt aacggcgttg ttgtccgtca accaaggaag ttgtccgatg
     9121 aatcacccgc tgtacggccg ttcgtcccgc tccctcccgc atcgcccgct ggcacttgct
     9181 gttgccagct cgctgctgct ggccaccacc ttgccggcca tggccagcga atcactcgat
     9241 gcctggcagc atcaacgcca gctgcaggca gcgtgggcac ggcccgtcgc cgatgtggcg
     9301 tcggcttcca cggcgcccac cgccaccgcg cctgcaacgg gaagcaccgc cctgctcggc
     9361 aaacccggcg atgcagccag ctggcgcagc gatgaattca acgccgattg gggactggct
     9421 gcgatgggcg ccgactacgc ctacgcgcgg ggcctgaccg gccagggcgt gcgcctggcc
     9481 ctgttcgatt caggctcggc actggcacac cccgaatttg ccgggcgcaa cacctccagc
     9541 atcaccatcg gtgcggactg cgccacgccc ggcgtggtgg ccggtgccgg cgcatgcggc
     9601 cagacccgtg gcgagcagcc gggctacaat tactacggcc ttggccccgg tgttcccgcc
     9661 gcgctggccg cacgactgat cgcggcaggc cagccctatg gcttcagcta cgccgaccat
     9721 ggcacccacg tgctgggcac catcggtgcc aaccgtgatg gcaagggcat gcacggcgtg
     9781 gccttcggtt cgaacctgac cgctgcccgc gtcttcggtg atacctatta cgagtggcgc
     9841 ctggacccgg acaatttcta tcgcccgcgt gcgctgtacc gcaccgatcc ggatgacgct
     9901 gccacactgg acatgtatgc gcagatccag gcgcagggcg tgcgcgccat caaccacagc
     9961 tggggcatct ccacccgcaa catgaccgct gccgcgctgg acgcgcagta tgcggcgatc
    10021 ggtgatggct acgacgtgta cggcagcatc tacgccggca gcggcgacaa gccgggctcc
    10081 acgctgatcc aggtatggtc ggccggcaac ggcagtggtg cggtggccgg catcaccgcg
    10141 tcgatgccgc gctggaagcc ggagatcgaa ccctactggc tggcggtggc caacgtgcgc
    10201 cggcccaatg ccgccgccgg cgaaaccgac tacgtgatcg acggcagctc cagcatctgc
    10261 ggtgtcgccg ccaactggtg catctccgcc cccggcaccg acatcctcag caccatcgtg
    10321 tccggcgaaa tcaagggccg catcgagaac acctcggcgt acgtgcggct gatcatcgac
    10381 agcgagaaca cccagtacac ctacggcacc aagaccggca cgtcgatggc cgcaccacac
    10441 atcaccggcg ccctcggcct gttgatggag cgcttcccgt acctggacaa cgcccaggtg
    10501 cgcgatgtgc tgctgaccac cgcgcgcgat ctgggtgcgg caggcatcga ccccatctac
    10561 ggctggggca tggtcgacct gcgcaaggcc atcgaaggct atggatcgct gcgggtggat
    10621 accaacgtgg tgatgaacca gaaggccggt ggcctgaagg tgtgggaggg cgatgcgtgg
    10681 gatgactgga ccaacgccat cggcggcccc ggcaagctga ccaaatccgg catcggctgg
    10741 ctgcgcctga gcggcgacaa caccttcaac ggtgctgtac tgcgcgaggg cacgctggaa
    10801 ttgaacggca gcaacacgct cacttcggcg gtcgacgtgc agggtggcca gttcctgctc
    10861 aacggcagcc tggtctccac cgcgctcacc acccacggcg gcgtcagcac ggtcagcgcc
    10921 agcggcgtgc tgaacaacag caacctgacg gtcgacggcg gcgtggtgtc cttcaacggc
    10981 acgcagaccg gtggcaccac cacggtcggc gccaacggcc tactgaaggg cgtcggcacg
    11041 ctgggcagca cccgcgtcga tggcaccatc gcccccggca actccatcgg cacgctcacc
    11101 atcaacggca actacgtgca gggtgcgagc ggcgtgtttg ccgccgaact ggccccgggc
    11161 gggcgcagcg accagctgca cgtgaccggc accgcgaccc tcggcggcac cctggtggcg
    11221 ttgccggagc cgggcaccta ctacctgggc gagcagttca acttcatccg cgccgacggc
    11281 ggcgtcagcg gccagttcgc caggaccgac ttcagcgcct tctcgccgtt cctgcagttc
    11341 agcctggcct acggtgccaa cggcgcccgc atcgacgtcg cacgcggtgc gctgctggcc
    11401 agcgcggcca gtacgccgaa ccaacgcgcg gtcgctgcgg ccgccgacgt gctggcgatc
    11461 aaccagggcc tgcccaagcc gctcacccag ctgttcccgc agcaggtcgg cggcgtgctc
    11521 gacggcatcg gtggcgaact gcacgctgcc accgcgctgg ccctggtcga aggcagccgc
    11581 catgtccgtg atgccgcgct gtcgcgccgc gccggcgcgg cggcacccgg tgcggagccg
    11641 ggcgacgcca ccggtgcatg ggtgcaggcc atcggcggca acggcaagct ggatggcaat
    11701 tccaacaccg cgcgcaccga caccaacagc aacggcgtgc tggtcggcgt cgaccgcgag
    11761 ttcggcggct ggcagatcgg cgtattggct ggcactggcc gcaccgacgt gaagcagcag
    11821 gagcgtcgcg cccggtcgaa gatcgacaac acccacttcg gtgcctatgc cagccacaac
    11881 tggggcggtt tcggcctgcg tggtggcgtc gcatggagcc gcaacgaagt gaagagcaac
    11941 cgcgatgtgg cctttgccgg tttcagtgac agcctgagcg cgcgctacaa cgcacacacc
    12001 cgccaggcct tcatcgaagc aggctaccgc ttcggcggcg ccgagggtgg cctggagccg
    12061 tatctgcagg tcgcgcgtgt ggaagtggac ctcaagcaga tcgacgagcg tggcggtgcg
    12121 gcggcgctgc acggcaaggt ggacgacacc ggcaccacgg tcgccaccgc cggcgtgcgc
    12181 ttcgacaagg gcctgaaggc atcgttccag caggacagct ggctgcacct gcgcggtggc
    12241 gttggctacc gccgcgcctc gggtgaccgc agccaggtgg ccaacctcgc cttcgccaac
    12301 agcaccacca cgtttgcggt cgagggtgca ccgattgccg acaatgcggt cgtggccgaa
    12361 ctgggcctgt cggcctggct gaccccgcgg cagcagctgg aactgggcta cagcggccag
    12421 ttcggcagcg aaagccgcga tcacggtgcc aatgcccgct ggtcgatccg cttctagtca
    12481 cgtgcccggt tagtcacgtg ctctcttgac gggttggggc ggcctcgcgg ccgccccttt
    12541 tttatgcgcg ttccctggac aaaggtggcc ggggcagaac actgccccgg ccgcggcggc
    12601 cccggggaga aggccgcctt caagcgtcag gctgccttca tcgcgtgctt gcgcgcgcgc
    12661 atgacgttgt ggcattcctg cacgtccggc agcagctggg tcacttcctg gcgcacggcc
    12721 ggcggcagat cgttctcctt cagcacgtcc ttgaacgcgc cgagcaggcg atcttcggat
    12781 tcttccagct cggccacgta gccgtagttg gtatcaccga aggcagcgcg caccttgccg
    12841 tagaactgct gcatcgagcc gacgaccgta ccgtgctcgg ccggcttgcc accgctggca
    12901 gcgaccgagc cgctcagtgc agcgacgatg cggcccttga cgccagcaat gcgggtgaac
    12961 agtgccgaca gctcggcatc cttcaccttg gtcgcggctt cttcatagaa ggacttgcca
    13021 tcacgggcga tctcgatcag gtcgttgagg cgatgttcga tggtggactg ggtgctcatg
    13081 tcattgctcc tgtgtagtcg attccgtggg agagaggcag ccgtgagtgc tgcctgcggg
    13141 accactgtgg acaggcccat gtgcttcgtg ggtgagcatt gattgatgca tgcatcacct
    13201 cgcccaaccc gcactgaccg cttcacgcca cggtggtgtt gcgttcacgc ggacgtgtcc
    13261 gcgcctgctt caccagggga tgaaaagaat gaccagaacg atgaccagca ctgcggcgag
    13321 cgctgccatc agcacgtttc gctggcgcca gctgggcttc ggttttcctg gggtattcat
    13381 ggatgcacac ctgtttctgc ggatgacccc gccagcgtga tggatctgaa tcagtgcccg
    13441 cgtagagggc acgtgcaagc gacgtgcacg cgccggagcg tatgtcgatt cctggcgctg
    13501 tcgttcgtcg gaacactgga agccaggccc gtcggcctgc aggagcctcc cgatgtgtcc
    13561 catcctcact gccttcgcca cctcacccga tcgcggccag ggcctggccc gcgacatgcg
    13621 cgtgcgctgg gcgctggaag aactgggcgt ggcctacgac gtgcagctgc tcacctttgc
    13681 cgagatgaag cagcccgccc acctcgcaag gaatccattt gggcagattc ccacctggca
    13741 ggacggcggc caggtcctgt tcgaatccgg cgccatcgtc ctgcacctgg ccgaacagta
    13801 cgcgggcctg ctgccgcgcg atccggatgc gcgcatgcgc gcgatcatgt ggatgttcgc
    13861 cgcgctgaac acggtggagc cgccggttgt tgagcgctcg atggcctggg tgctggagcg
    13921 cgagcagccc tggtacgcgc agcggctacc gatgctcgat gagcgggtgc ggacgcggct
    13981 ggcgcagttg tccgcagcgc tgggcgattc cgcctggctg gacggcggat tcagcgcggg
    14041 cgacctgatg atggtggcgg tgctgctgcg gctgaagagc agcggtctgc tcgatgaatt
    14101 cccgcaggtg agcggctacg tggaccgggc aacgcagcgc ccggcctacc agcgcgcgtt
    14161 cgccgcgcag cgggcggtgt tccagaacgg gtagttccgc gcccggcgtg gaaacactca
    14221 gcgcggcctg ggtcggctgg cggcctgtac cagcatcagc tgcgccacca ggatcagcat
    14281 cgcgcacccg gacaacagcc acggatcgat gtaccactgc gcgttgaagc tgaactctcc
    14341 ggcagagatc cgcttccagc cgttgaagtg ctgcatggcg gccaccacga acgcgaagcc
    14401 gcctgaggtg tacgcaagcc agggcacgat gaggccgccc ggccgcgcga acagcatcaa
    14461 cagcccgagc acgccgatca ccgtgcgctg cacgcggcag taggggcaga cgtaggccag
    14521 cccgctccat tccacggacc aggccagcag gctgaccagc accgacaggc ctgcggcaag
    14581 gtacagccac ttcggcgtga tcgtcatgct gccgctgtat gccatcgcct gctccttcgt
    14641 tcaaagacct gggcagggta acagcgccac agggtcaatc cttcttgaag accgtgcgct
    14701 tgccgatcgg gctgctcttg cgcgccgtcg gcctggcgag gcccggaatg aggaagtcgg
    14761 tcaccttgtg gcccttctgg accttggcgg ccagccagcg cggcatgcgc ccacggccgg
    14821 accaggtgag ccgcttgtac tccgggtcgc ggtacttggc cgccactttt ccggtcctgc
    14881 gccgtgccgg cttccggcgc ggggcgtcct cttcggtggc ctctgcgccg aacagctcct
    14941 caagggtgta gcccgcttcg gccgctgcgg ccttcagcag gcggcgtacc gcactggccg
    15001 ggcggcggtt ggaaatcagc tgtttccgct gttcagcggc aaccaccagg gcgcccagct
    15061 cgcgaaggct gagcgattca atatcaatcg tcatgcggga aaggtctacc gcgccgcggc
    15121 ggctgtcaag gcatcctgat ggccgggcat acacacaggc ttcaccgccg ctgggctccg
    15181 atcgccttcg cacgccatcc ccgaggacat cgacgtgagc acctcatcgc attcgctcgc
    15241 ctacctgctt gcacgcctcc tgctgatggc gctgttcctg gtctccggca tcggcaagct
    15301 cggcgacccc gctgccaccc tgggctacat ggaagcgatg ggcgtgccgg gcatcctgct
    15361 gtggccgacc atcgccttcg agatcggcag cgggctctgc atcctgctcg gcttccagac
    15421 ccgcctggtg tcggtggtgc tggtggtctt cagcctggtg accgctttca tcttccacca
    15481 caacgtcgcc gacccgaccc agcagatcat gttcctgaag aacctggggc tggccggtgg
    15541 attcctgctg ctggcctgca ccggggccgg gcgttacagc attgatgggc gcgggcggcg
    15601 cgcgcagcga tgacggaggc gcaacgccgg gcattgcccg atgccgtcct cgcgcccagg
    15661 gcgacacgca cacctcagcg ctgaggagct cagccctgca tacgccgccg gatccggaag
    15721 tgatcccgat acgctgaagg ggacatgcca acgatgccct ggaacgcctt gcggaaggat
    15781 cccgcgtcgt cgtatcccag tgacgcggct atccgggcaa cgggaagatc cccgagctgc
    15841 agcgcgtccc tcgccttggc catcctgacc tggcggatat agtcggccgg attgaatccg
    15901 gtggccttct ggaagcggcg gatgaaggtt ctttcggtga gatgcgcacg ctcggccaag
    15961 gcgatcaccg tgtggcgctt tcccggctgc gaaaggatga agcgctggac ggccagcacc
    16021 gccgcatcat catgatcgaa ccttggcagg aatccctgca gtggccgctg gtcctgccgg
    16081 atcccatcgc tgagcatgaa gcgcgccgtt gccagcatca cactggagcc catcgtgcga
    16141 tcgacgatca acagaccgag atcattccag gcaaggatcg cgccggacgt aatgacgtca
    16201 ccgtcatcga tgacaacgtt ctcggtcgtc acctgcacgt cggaatacgt gctggcaagc
    16261 agctccgcga atgcccaatg cgtggtgacc cggcgtcgcg caagcaggcc ggtctgtgcg
    16321 agcacgaagg cgcctgcgca gaccgagcac atgatcgcac cgagcgaatg gagctccttg
    16381 agccactgtg cctggcgtgg catcgcggac atccgttcgg gcatcgcaac gctggggggt
    16441 gagatcacga atgcgggagc attcacatcg ccgggatcac tgtcccagca gcattccatg
    16501 cgccccgatg ccaggttcaa ctgccagtgt gtcacccgga tgaaacactg ccggtcatct
    16561 tcgtgcggat acgtggccca ttcattcgcg atccggaaca gatcggtcag gccgtggatc
    16621 gccgccatct ggcaatcggg atagatcagc agagcgattt caatccgctt gtcagtttcg
    16681 atacccatga atgtcacctc cgccaatttc aattgatgca gcgctaccta gaatggattc
    16741 ggacggagtg agggccgcct caggatagag ggaaatgcgc gcctgaggcc actccgcaac
    16801 ccgcactgac agcgtccttc ctcctgcgcc gatacaaggt cgcaggcatg caggacaccc
    16861 cccgactcac aacagcgagg aaccctgaaa tggctacggt taccacgaaa gatggcgtcg
    16921 aaatcttcta caaggattgg ggtccgcgtg acgccaaggt cattcatttc catcatggct
    16981 ggccgctcac ctccgacgac tgggacgcgc agatgctgtt cttcgtcaac aagggctatc
    17041 gcgtggtcgc gcacgaccgc cgcgggcatg gacggtccag ccaggtgtgg gatggccacg
    17101 acatggatca ctacgcggac gatgttgccg cggtggtcga gaagctgggc acccagggtg
    17161 cgatgcatgt cggccattcc accgggggtg gccaggtggt tcgctacatc gcccgccacg
    17221 gcgagaagaa tgtatccaaa gcggtgctga tcagctcggt gccgccgctg atggtcaaga
    17281 ctgccgcaaa cccgcagggc acgcccaagg aggtcttcga cgacttccag gcgcagctgg
    17341 cggccaaccg tgcgcagttc taccacgacg tgccgtcagg ccccttctat ggctacaacc
    17401 gccccggtgc gaagccctcc gacgcggtga tctggaactg gtggcgacag ggcatgcagg
    17461 gctcggcgaa ggcgcactac gatggcatcg ttgccttctc gcagaccgat ttcaccgaag
    17521 acctgaaggg catttccatt ccggtgctgg tgatccatgg cgacgatgac caggtggttc
    17581 cgtatgcgga ttccggcgtt ctctccgcga agctggtgaa gaacggcaag ctgatcacct
    17641 acgaaggtgc accgcacggc attccgacca cgcacgcgga ccggatcaac gccgacctgc
    17701 tggcgttcct ggaaagctga tcatgaagga accgggaagt gcttcaggca cttcccggac
    17761 atggatggcg agagccgcct gtcacacaca ccaggtccag gtcgagacat gaattcttaa
    17821 ttcttaagaa ttcgaccaag cgcccttcgt gtcatgcgac cggcaaagca gcatgatgag
    17881 cgccccattc aagtcagggc gctcgttcat cttcatgcgt gacatcggac agttctacgt
    17941 aaccagcgtc gagggagtga cgcgcgcgga cggcacactc ctgcaggtca ctcgaatcga
    18001 ttgcgcctgc atcaagtgct cgtggcagtt cagggcgata cccaatcatg ggctggtcga
    18061 tcttgatggg gcagcggccc tcagttgccc aacctgcggc aatcaccagt cagtcagccg
    18121 ggcacggctc gaagagctca atcgacgcaa cggcgaatag ccagcgcttg gaccttccat
    18181 caacatcgca ccgacgctgc cgatacctgt tcggcgctag ccttcagtca accgatattt
    18241 gccggccttc ccatgagtca taccggactg tttcagatca ccaacctgac gtacaaagcc
    18301 ggagagcatg gcactctggc gcgggcactg cagatcgtag cgacgtgcac ggcctgcggc
    18361 gctacgagcg tgtggggcga agatgagatg gaacatgtcg ccgggggaac cgtgctggcc
    18421 tgccgcaact gtggcgtccg ccaggccatc agcaacgcgc gtctttcaag cagcccatcc
    18481 gacatccgtc atccgcgccg ctgaatggca cgcggttcgt atcgcgtagc gcgccagcag
    18541 acgcaggcgt tcactcgcct tttacaacgc gtcgccacct ccggcgaaga agcacccgga
    18601 tgcatctgcc tgcatccaag caccgcgccc ccgcgtatgt aggatgcccg cgccttgcgg
    18661 gcctcccata gaggaacgcg ccgtgaaagc tcttcagcgg atagccgcca ccgtcagctt
    18721 cgccgtactc gtttcagcca cttcactgag cttcgccgcc aacaccgtga tggtgggcgg
    18781 agcggaaatg tatcccagca agaccattgt ccagaacgcc atcaactcca aggaccacac
    18841 caccctggtc gccgcggtca aggcagccgg gctggtcgat accctcaatg gtgctggccc
    18901 cttcaccgtt ttcgcaccca ccaatgcagc cttcggcaag ttgcccgcag gcacggtcga
    18961 tacgctggta aagcctgaaa acaaggcgca attgaccaag atcctgacct accacgtggt
    19021 accgggcaac tacagctccg cgcagctgat ggccgatgcc aggaagcacg gcggcaaggc
    19081 gattctgaag accgttgaag gtgagtcgct caccatcgcg ttgcatgacg gcaagctgtg
    19141 ggtcattgat gccaagggtg gcaaggctgg aatcagcatt gccgatgtcg gccagtccaa
    19201 tggcgtgatc cacgtgatcg acacggtgtt gatgccgaag taaccacgac tgtatcagcg
    19261 gcagtcgcgt acggcggctg ccgctgttgt gagagaagac ccggctatgg acggccgcac
    19321 cctttgaccg gtagcgatgg tcgttgcccc cgattgttga agcctgccac gatcactcgg
    19381 tccaggcggt cgtggagcat ctgccggctg tagaacggtc gccagatcgg caacgtccac
    19441 tgaatgcgtc cagcaatggc gactcaccgc gagatggggt gaggggttgc ccgggcgcga
    19501 gaggtcagga tggcctgact tccctgcata ccagttccgc caattcgcgg cacgcgaaaa
    19561 acaggccctc aacaacccct tcatccagat ggcggtcggg cgtggccgtg gattcgcagc
    19621 gactggccgc atgcagcatc tccactgcgg tcagcatgcc caccgccgcg cggtcgatcc
    19681 tggccaagga ctgacggcgg ccgtctgaca ggttctcttc cggccacagc atgccatcgg
    19741 acccttcgcc atcgcggatg cgcttcaggc agccctggaa ggtgctgagg tcaaaggcgg
    19801 ggttgtcgtc gtcgttggtg ggttcatcga cggggaatgg cggaatcttg cgagtggtca
    19861 tggcgtcggc ttccgtggct gtacttgaca ctgccaccgc gcggaagtcc gcgaccatgg
    19921 agacagcttc acggagcgcc tgtctagttt caggcttcgt ccagtcgatc tcgtataccg
    19981 aacgcggcag actctgccgg ccctccgggt ccgtgaactt atagggattc ccattggcat
    20041 accgataccg gttgaagtgc cccacaggct ggtcatacgc cgtcaccgga tcgaccgaca
    20101 ggaacacacc caactgcgga tccatatacc gctgctttta gttgacgtac ggggctggga
    20161 ctacccataa cggcaccgct gtccacagat tcaagccacc aatacatcga cgactggaaa
    20221 cgcgaagaat ttgagatagg gggctggctc aatactgaaa tcagccgact ccaccctcca
    20281 attgtttgga tcccctaaga aaatcgcacc tcggcgaccg tacaattcat cgcgcagcag
    20341 acgatcaagg ccatccatgt ctgcgtcagc gagaaagcgc tcaatcattc gcttctcctt
    20401 cgcaagaata ttgatcacga agtagaccct atcctgcaag ggcttactga agtctgcctc
    20461 cacgcagatt gcgtataggt atcgaccacc atcttccatc acttgctgca actcaccgtc
    20521 gtaccattcc acaagcaatt cgatcttcat ttgtaaacct cattaaactt ctgagccact
    20581 ttctccgtta ctggcttggg gagttccaca gtatggtggt tcggattgtt cccggtttga
    20641 ggtgtattga acgcgctctt tgcctccgcc tgatcggcaa cccggttttt gagtctatct
    20701 gccgcactca ccctctcctg cgctttgacc gaaaccccat gcgggaaccc ggccttctcc
    20761 gccttgacgg cttgagctgc aagcgattca gcgctctctg cgccctttcc aaatcggaca
    20821 aagaaccctg ccgccttgac cgcgctcttt ccacccggag cacgggacat cagctgaaaa
    20881 cgggtgaatt tcgaacatat ttacgggctc tacggcacgt atgccaaaac cacctcgtat
    20941 cgatatccat caccaacttc gtacacgtga gtctggagca ctagatcact cctcccctcc
    21001 tcttctgtgt aaagatcaac cagaacattc caaaaatctc cataccagat gcagatggaa
    21061 gagttccagg actcatccgg cagccttttc aagtgtgcgc catacgctcg aatgctgtct
    21121 tgagcgcttg cccacacatc tggggcttga agggttacct gcggtagcga tggttcgccc
    21181 ccttggatca gcgcatcaac aatggctgcg agcgtgggcc gccaagcttg cggcaccgct
    21241 atctggttct caccatcttt agctatggtc gtttcattca ttgctaatct ctcccgtgca
    21301 gtttcttatg gcagtccaaa cagacctcgg catgattgga ggatgttgta ggaccaccgt
    21361 cagcgtgtcg ctcgacatga tgcccggcgg aattgctccg atcaattgac gtcccgcagc
    21421 ccgtcgcaca ctttccacct tgttcagctc gcttggattc tcgtgcggaa tcagtgaaca
    21481 accgctgcgg atctcgttgt gctactggaa ctgaccccgg ccccgtgggt ggctttggaa
    21541 gatctccagc catcttgccc gcgtcgctga gcttgtctgc tgcgcgcgca ccgtcaacag
    21601 ccttctcaag tcctctggcg gccttgattg ccgcacccgt gcctccggga acaaagggca
    21661 ccgcagctgc cgtcgcatca atcgccacac cgattgagtc gacaataccc tctcccacat
    21721 taccttggct aaagttcgag tacgcactgg tcgcgcccat cgcaatgttc gcaacgtccc
    21781 atacagtttc gacaatgcgt ccatccggat ccgtgaatct gtacggattc ccgtttgcat
    21841 accgataccg attgaactgc cccacaggct gctcgtacgc cgtcaccggg tccaccgaca
    21901 aaaacacacc cagctgcgga tccatatacc gctgctgcat gtagctcagc ccggtctcac
    21961 catccatcac atgcccggtg tacccagggc catccaccag cttgccgatg ggcgcgccat
    22021 acggctcgta atgagtacgc tcgatcacgt tgccggaagc atccgtactg gcaaccgggc
    22081 ttcccagcgc atcagtgtgc agctaggtga tcttggcgtc cgcgcctgcg tagtcccggc
    22141 gagcgatcag gctaccggcc aagtggacgt actcgcgccc cagacccttg cggccatcaa
    22201 cctggaatac cagacgaccg tcctgagcat actgggaaag cacaactccc tcagtgggcg
    22261 agtatgcaag gatccgcctg cccagcgcat cgtagcgata ggtctctttg ccagtcacct
    22321 cgcgcagtcg attgccgaag tcgaagctgt ggttgagacc attcttcaac ttcaggttgc
    22381 cctgcacgtc atagctcagg ccgacaagcg tgttgcccgc gccatcccgc acattggtaa
    22441 ggcggttgtg cgcgtcgtac cagtagcgat ggtctttgat acttggtcgc gggcctgaac
    22501 aagtgacaga tgttcgaccg aacctaagat acgacgccta ccgtgcgccc aggtcacgat
    22561 ccaagccttg tgcacagagg ggggctgctc gcgaagaatc aggtcgcgaa cctgagcatc
    22621 cctaaactca taggggtcat ctcgtggctc tgacgtgaga acgatgcgtt tggtaagggc
    22681 gggtaacatc tggccgattg tccatggcga tagagccaac ttaggacagg ttgcgaggca
    22741 gtgtttggat gaggattgtc cgaccacatc aaggtgatcg ggaaaatacc tcgaccacct
    22801 cgcgccccct aacagagatg gcgctcacaa cagttcatca tgaacgtcac gatctccata
    22861 cgcccgcaga tagatgttct cagcctgacc ttactcatcg aggagcacta ttgctttcac
    22921 atgctcgcca cagaactccc gcattccaag gtacgcgccc gattcgacca attccagctc
    22981 attcattaga gcactgataa tcacttgaag tattcgagct caagaaaaaa cttccaccca
    23041 gcatcgcaaa gatcccgacg cgctccaacg gaacaacaga cgtcgtccaa ctgtgctctc
    23101 ggttatagcg tttgatcgcg ttgccgctgg gatcgttgtg gcaacgcaga atgctgcagc
    23161 ctcatccaac cttctgctta tccgtcatgc tgaccagcag tacaacggac ttccaaaaat
    23221 accgtgagct ccaagctgct cgggcctttg cccccaaaat gcatagaaca gatcctccct
    23281 ttcccggtag accaatcagc gccccccctc cttggcgacg cacatcccag aaatctcctc
    23341 gccattatca aatcccggaa tacctggtgc cattaccact gcagaaagtt caaatgtctg
    23401 acatgcattc cgcctgatgt cattcgcaag tccttcaaga tattcgctcg aactcatgcc
    23461 cgcgtcgatg tagacatcgg agccatcgac caggcgcgac tccaacagat cactaatatt
    23521 actcataggc tcgaccttta tggcggagga agtggcttcg ggtaatgaag tgtctcatga
    23581 gacttttcac cattcgccgg aatatcgatt cgaggaccag aaacttcatt tcctgtggtg
    23641 ccggaaacag gagtcaaacc tgcgacctac gcactgtcag ccagcagaca tgactgagaa
    23701 gcttaggcat acccagcgaa tgagtcagcc cgcgccgtca atcgatacga agacgtattc
    23761 atccgccgga aattgccacg aacaggggac tacatctccc ggcaaagtca agagcagtgc
    23821 acccggcacg tccaccgcaa cgatcgaaag gattcggtca tcagagaagt gtaggcgaat
    23881 accagagtca acgatcaatc cagcaccctg ccaacgaacg acttcaacac gcgtaacgtc
    23941 aagtgcttcc gaaagttcca aattgaccca ctcatgtttc gattcgacca gagcactcga
    24001 caagatctca acattaatag ttccaaattc atcccacccc tgaacaacgg tactggaaga
    24061 tgtcagttca agggacacat tggaatcaaa gctcaagact acttgccaag ccaggctcgc
    24121 agtctgcgta gagggaaccc tgcagctcag aagccgacgc ccctggagca gctgagccac
    24181 ctcactcggc ctcgctccat cccactgcat cggcaaataa cgagtgccgc ccggaagtac
    24241 atcaatcgta gtgtagggtt tcatgtggct tgtcaccatt tgccgggatg tcgatactct
    24301 tgccgcctga actgttcgtc tcgcgaccaa aaacgccatt ctctccgatc tgtgctccgg
    24361 gaggtgcgct atccccgcga actgtgggtc tggtatctcc ggcgagcgtt ttgagatcat
    24421 cgtcatagct gccggtacca ccgaactccg gcttcagatt tccgctcgta tggcggctgc
    24481 cacttttgtt cggacccgcc aaggggctgc cctgatcacc cacaagatcg gttggaaggg
    24541 ccggagtcct ggcaccacca tcatctattc ctgctccgtc tgagctacca gcttcactct
    24601 tttggaacag cctttttacg cttcgatcta tcgcttgccc tgcctgctga cgttgctcag
    24661 gcgtcgtact cagatagtag accgtcgcaa ccacaagcgg accgactaca aacggtgcaa
    24721 ggatggtcgg gttgcgccca tccggatccg tgaatctgta cggattcccg ttcgcatacc
    24781 gataccgatt gaactgcccc acaggctgtt catacgccgt caccgggtcc accgacaaga
    24841 acacacccag ctgcggatcc atataccgct gctgcatgta gctcagcccg gtctcaccat
    24901 ccatcacatg cccggtgtac ccagggccat ccaccacctt gccgatcggc gcgccgtacg
    24961 gctcgtaatg agtacgctcg atcacgttgc cggaagcatc cgtactggca accgggcttc
    25021 ccagcgcatc ggtgtgcagg taggtgatct tggcgtccgc acctgcgtag tccctgcgag
    25081 cgatcaggct gccggccaga tgaacgtact cgcgccccag ccccttgcgg ccatcactct
    25141 ggaataacag ccgaccgtcc tgcgcgtact gtgaaagcac cactcccagc cctggggcgg
    25201 aggcaaggat gcggcgcccc aacgcgtcgt agcgatagct ctctttaccg gtcacctcgc
    25261 gcagtcgatt gccgaagtcg aagctgtggt tgaggccatt cttcaacttc aggttgccct
    25321 gcacgtcata gctcaggccg ataagcgtat tgcccgcacc atcccgcaca ttggtaaggc
    25381 ggttgtgggc gacttacgcc gatgcccggc tatcagtcat ccgcgacctg catgtactca
    25441 agtgggagac tgaactgcga ccggagacga tcaaggtatt cctccgttac gcgatcaaga
    25501 tgcgcgtttg acacaacgac cagcgcggcc gcctctaggc catttccacg gtaggagtac
    25561 tccagcaact gccccatggc ctgcctcacc gcatcagagg ctgtcctggc tggcttaatc
    25621 tcgtagagga cgaactggcc atcctgcctt aacactagcg catccgcaga gccacccgta
    25681 cctgttgggt gctcggtcgc taccgagtca ccaaattttc tacgaagcaa atcgacgagg
    25741 cgatcctgaa tgacgttctg cctgtactgg atcgacttca accccgcctc tacctctgcg
    25801 gtgccgttag caacacgcga tctatgccct ggcacgaatt ttactttgtc ggacccggcg
    25861 accaggttgc gatagacgaa ccaaggaaag atgttcctaa cgagcggttc ttcagctatt
    25921 tcgcattctg tcaggtgcgc cgatagcgcg gcagcttggc tcgcccaatt gccacccgga
    25981 ttgatgaagc cggtatgccg agcacaccat tgcgcaacct cagcatgctt cttgccgtcg
    26041 acgacagtgt ggtacgtatc gggatggatg gcggcaaacg ccctagccaa gacgaggcgc
    26101 gggttctttg ggatcaagcc atccgttgcc caacgctcaa ggacagcccc caatctctgg
    26161 aagctctcag gcgttccgtc agccgagatc tgctttgtca tctcgacgag ttgtgggcga
    26221 acgcgctcaa ctgctgctct tccgagagtt ccttgaccgg catgactgat ggaattgtcc
    26281 tgcatcaccc aaatcaggtc gatgatgtca tcaaccctat cgctgcgcag agcgctagcg
    26341 acggccacag tggcttcccg atacttcggc agccacgtgt caagcgaaga attatttctg
    26401 tcaaggaagc gcgccttgaa atggttagct tccgcgtcaa gatgaggcct cactacttcg
    26461 cgggacaggt aagcacgcag cgctggcgag atctctaccc ggtctctttt gtcgaacgta
    26521 agcgtggtct gcttcttgtt agccctgtac ccagttgcag ttagccccgg cgtccctcgc
    26581 accaactcgc gcaggaacac cttcaccggc aagtatggcc cgtccgcctg gtgtcgctgg
    26641 tcgtgacggt agatcataat ttcgccgtcg cgcttgacaa tgcgaggatg gataatttca
    26701 tacggcgcat ccgtccgata actgacgccg cgcaggtgaa cgccatcaat gaactgctct
    26761 agctcttcca tgcaccccaa tctccaatga aatgaccatc agtaggtcgc aaccgcccga
    26821 agatcatatg gccagagagt gtccaaagcc taggatcgct ggcagtcgca cctaaatgtc
    26881 ctggaggaca cctgcgatga caaaggtctc attctttcga agagggcgtt tcgcctatct
    26941 agactggcga gagaacggaa gacgcaagcg actatctatt ggcatcctga gcgactcaga
    27001 cgctgagcca gctcgatcat ctcgtcgtcg tcctctttct tgccgatctg cagcagcgtg
    27061 ttgatctgcc cggcaatgtc ggatgcaagt ggatgccgct ggacggtcat ggatgcatcc
    27121 caagcggaaa tcaaggaact caaggacttc gcggacgcct ctggacttcg ctggacgtca
    27181 acgtggtggc ccaccagcga ccacaaagaa cccacaagtg attgatatga ttaatattca
    27241 atctactttt atctacttta gactcacaaa aagactcact tcggccggtg cttgagaggc
    27301 cggtgcgcgt tggttgcgtg cgacgtcgat ctgccccaac actggcaaac cgaagggaag
    27361 acctagagaa tcttggcccc ttccaccttt acggacaaat atgttcggca caggagcctt
    27421 caggactgac ctgccgacgc ccacgctcct agaatgcctg gagcgcgcca aggccgaaat
    27481 cgaggtcgta ttctcagtac gcggcgtcat cttcaatccc ggcgtcacgt tcgctgatga
    27541 atgggattgg atacgcagcg aaggcgagga acgtcctgac tacgcatcgg aatttgatga
    27601 ttgggtcgag ctcttccgcg cgaagggaac cctacctgag gtctatttca tccttcgagc
    27661 ttcgatgagc ctctggttcg aggctgaaag cgcatacctc tcaggcgacc gggaccgcgc
    27721 ctggacggca ctcgtccggt gcaacttctt tctcggcatg tgctgttcac acgaatccca
    27781 ccgcgaacgg tctagccgcg caggtcgcaa ttctgccaag cgcacgcttc cacttcggga
    27841 gatggttttg gagatgctat ccgccatgcc cgacaagtca cgagccacca agcaggaaat
    27901 atgggatgaa atcgtccccg ccatgagttc tttcgttcct cctggagatg ttcaggaggg
    27961 cccactcgat tgggtgcgca aattgggccg ccacccgaaa gagcagtacc gagaatcatt
    28021 ccatcgacgc ggaaagggag agaagagcag gcacgggaga agtgctgacc cggcgaagct
    28081 cctacggact tggaccaaca acaacgaaga aatacgtcag cagttcttcc gtgtggtcgc
    28141 aggtccattg accactagga gaaagagaag cagcaaagcg taggctcccc tactctgcag
    28201 gtctgtcaga ggcgcgtggg cgacctggtc gatagtcaac cgggagctgc cccttgccaa
    28261 agattcgccc gatccctggc tcgttcaatc tggcgtagta atcggcctta gcaagataga
    28321 gaatcgcgtg tttcagtcgg gccctcttct ccacgtcatc gtgagcaacc atgccgatgc
    28381 caacaccgtt gaagcgttcg tagtaggcct tattggcatt gcagttccag tagcccccct
    28441 cccccttagt gatcacttca cgccagtact ctccaagcat tttcccgatg gcaacatctt
    28501 gccgaatctc gtgcccgttg aagagcgcca tcacatgcac gtgataggac ttcgaaggcc
    28561 cgtactcaag cttccagata tacccgacta gagaggggaa cttcacgcga agtgctcgaa
    28621 gccaggccgt cagatcccgc ttaacccgct cgggcgcaat ggacttccct tcaggcgtct
    28681 gccgatactc cgcactgtag gccagatcca ctcgtacgac acagaggcga gagtagcgcc
    28741 tatagagcga gtccacgtag tccaaggccg accgggcatt cttccgagcg cttctctcct
    28801 gagcactcag cgcggcagtg aaggaactat gcaaggcctc ctgacgaatc ttgtccaccc
    28861 actgattggc agcagcggca tcgacatagc ccccggtaat cacgtccgcc ctgaattccc
    28921 tgaattcgcg agacatgatc tcaaagtatg ggctgagctt gtgactggcg tagaactcct
    28981 cgattgccca atagtccaga ttctcgagca tgcgaattcg cttgacgacc ggatggatac
    29041 gcagggcagc gcggcgaccc acaactgcat gcgcgaacag ctcccccttg gtccggacca
    29101 acccccgcat cgcttgatcc acctcgatga tctgctgcgg gtagctgcgc catggtccca
    29161 cgacaacgca gtcctcacgg tgatccagca ttcgatcgca ccactggcta atgaggtttt
    29221 cttcttttct gtacatgcag tatccagtgc gacatatgtc gcgctactac atcttccctg
    29281 gcggcttgat tagcccttct ttgcctggaa gaacgtagct agttgccaag ccaagatata
    29341 aatgtccgga actacgctga acgccacgcc ctatcgttca aggcctggac catcgttcgc
    29401 ccccaagaat tgacaccaat tcatcgagat caagcgcagt cgagttggtg tcgcctacgt
    29461 aataggagca acacgctcag cgatcctggc ttggatccat ccgtccactt cactctcaac
    29521 ccaagcaatc gtgccgggac tcaaacgcac gggccggggg aaggtcgggt catacctctt
    29581 cgaacccggc ttgatggccg cgtagatcgt cgaacgaccg aagccggtcc tgcgttcgac
    29641 ttcctgcctc ctgatgaagc gctcaagaag gcggtcgtgg ctgggggaat tcatcgtgtc
    29701 gcctcgtgct ggaagggaca ctcaagctat gtcccaagct ggcaagagtc acgaccgtca
    29761 accggttaac ggtcgttagc caaggctgct cgtgaccaag ctggcacaag gggttccgtc
    29821 gagttcgttc ctttttctcc gtcaggttgg ttccatcggt ccactttgga aaggcttgga
    29881 agccccgctg cagcatgaca gcgggacgtc cagccagatg gctaccgaga tgcctgcccg
    29941 ctgatcaaac cagcaaggaa gacaaccgcg aaggcggcca ggtactcgag gggggaattg
    30001 gatcgttcga tgaacacgat aggctcctag tcagtaggga gccggcattg cgccggcata
    30061 gaggagaggc tgatgcccct ccctatcgtg ttatgggttt gaaattcgtt tgcttggccg
    30121 atcagccagg acgtggtccg gccttgttcg gccaccaggg gacggctttg acggccggcg
    30181 tcggctccac aatgcccact gcggcccgca gtaccaccgg ccatccgtgc ccatcgatgt
    30241 agtgccggat accgttctgg cgcaggaact gcagctgacg agctttctgg ggcgtccgcg
    30301 tcagcgcctt gatctcatcc ttggtgaggc agagcttttc agacatttca gacatccttg
    30361 ctggaatgcc aagcaggcct aggcgcgtcg agtcgttctg gcgcccccac tgccttacga
    30421 agcactatca cccggttgta ttggtcgacc tgatggggaa ttcggttctg gcagaaaaag
    30481 gccaattgcc tagccctgat cgggctccga gtgatctctt cgacttcagc gcgcgacagc
    30541 acatccccag tcatcgaatg cccccaaatg gccagtgccg atcatgcccc agggcgctac
    30601 tctcggctac agaccaagga gaagccatgg acgagttacc agccgcactg ccgcttgagc
    30661 agcagatcgc cctactgagg cagcagctga ccatcctccg gatcgacctt tctggcaagg
    30721 actggctgac ggcggaagag gcggcgcact actgcggcgt gtcagttagc cagttcaatg
    30781 cgagggcgca tgaatatgac ctccatccac gcaaattcat gggcaagaag ctctacgaga
    30841 ggtctgtcct ctatcaggca atctacggcg cgaaggcttg gacgcgtcca tccgcaacct
    30901 ccgcaccaac cctagctgcg acctcccctg agatgaagga ggcgcttgcc cggctacggc
    30961 gctatgacga tcgcaagggg aaacgctagt gcaacctccc ggcaagctga tgaccgttgc
    31021 agaagcggct gagcagagcg cgtgctctgc caagacgata cgcagagcca ttgatggtgg
    31081 gcagctcgcc gctgtgagac tcgggcaaag cgccaagtcg gatcgcatcc atagagaaga
    31141 cttggaggct tggtggaacc aatgccgcct gcgatctgta gcagctccca gaatatctat
    31201 acgtgatatt cccccgccac cactcgatac ggcggaggcg agactcgaga agaggctggg
    31261 aatcagtgct aagagcaagt cggccccccg ccgacgctga gcaaagagga gccgcaaaac
    31321 gccagcaagg tccggcaatc ctgaaggccc ccgcccgcac tacgcctagt cttggacctc
    31381 ggcccggaag gcgatctcaa tcagctgctc ggggaatgcc aacgccgaga ctccgatcag
    31441 gttgctggca acctgcggca caggctggcc gtacacgacc ggtcgcacct tgccactggc
    31501 cgcgaaagct gccggaacgt cgatgacgaa cagcgtttcc tcgaccacat ccgcgagcga
    31561 cccgcccagc tccgctagca gcacctgggc attctcgtag gtgcgcctca tctgggcttc
    31621 catggtgtcg aaattggcgg gcttgccgcc cgcccccagc tccgccggcg ctaccaactg
    31681 cccctccgcc gtatgcgaca gctggccgga cacgaagatc gtgttgttga cgcggacggc
    31741 ctgcacgtac ccgtaggccg actcccacgg tactccgaag ctagcggtct tgcgaatggc
    31801 ggcgctcatc gttgctctct ctagtgaaag ggcaagtgtg gcaagcaatc agcggcgact
    31861 gcctcccctg aacgggggat cagattcgag cgcgggacag ctgacctcta cctgctctga
    31921 cccaggcctt cataggatcc ctcgccctgg gcttagtctc cttcggcggt cggcgcggtt
    31981 ccagcgccgc cttgatccgc aggacctcct tcaccccagc ctcggccagg cgccgggcct
    32041 gttgctgctg ctcgcgggtt ggtggcaggc cgggcagcgg gggctccggt tgcatcgggg
    32101 tgctgtctgt cagccggaca accgcttggc gaagtggcag atcagggtag agcctggccg
    32161 cacaccagcg ctcggcgtac cgcttcgcct gccggacgtt ggccgcgcgc acttccttca
    32221 cctgccacat cttctggcct tccatccata ggcggacgcc agggccgcca tcgggcgtga
    32281 cgctggccgt ctcgcggccg ctgtaccaga gcgcccagcg ctcaccggtc tggacccagc
    32341 cagaggggat cggggtggtg cgggagcctt ggtagccgtg cgagggaagc atggccggaa
    32401 gaatacgggc gacggtctca cactctgcga tggcgctcga cgttccaact cgctgtgatg
    32461 aacagttcac cttggatgtc gcacactgca gcctcgcggc tcttctccgg tgcagaatcc
    32521 tttgcgcccg tgtccagcct ttaaacggca cggctatgca ccctcccaat gccttcagga
    32581 tccattcgat cctgcccctg cttgcgctca atggcgcgat cacccgcttg gagcaggtgc
    32641 gatcaacctg caagaactgc ggactgaggt cctcactttg cgagggtgca ggccttcaaa
    32701 ccgatctgaa gggcaccacg ctcacctgcc ctgcttgcgg agctacagga ttgatggacg
    32761 aaatggagat ctggcatcac tggcttgagc agcgacgtcg tgaacgactg ctggcactct
    32821 ttgatccaga gcccgacgaa ccacttgagg atccaaaatg aatgatcgaa caccggagtt
    32881 gctcgaccga ctccattgct gcgaagccgc aatagaagtg caccgtgcct acatcaaagc
    32941 gttggagtac ggcctgcgca tggcggtatt cagccatcca gcgcgtgagc agctctccga
    33001 tgcctggctt cagctgctgc ccaatatcgc ggcgaagcac cgagacgatg gcggcgagct
    33061 attcgccgcc gccttccaac aggcccttac agtgctaacc gagcaaatcg gcgagccaaa
    33121 cagcacgcgc taggctgcga tcgcgtaggg ctcgactaac gcaactaaga gatccatcgc
    33181 cgtcgcgtag gatgccaggg cgtcgccgcg ctgattgaac ctggtccagt ccgcatgggc
    33241 cacgcgctta agctcctcgg gctcgactgg aagccacttc attggccaga acggcagccg
    33301 gcgttgtccc acccggcccc gctgcagctc cacgataccg ttgtggctgc tcgcacccag
    33361 cacgcgggag tacgccaccg ctaatccgtc ttccggcccc tccaggtact ggaggaagcg
    33421 gccgccatcg aagaggagca cccccgtaac cccagcatta cggttgaacc gagccgcgtc
    33481 gtccacaatc tgatccagct ttccgttgga caggcccagc ttgtcgccgg caatttcctc
    33541 gccggcgctg ctcacgtata caaccgccct gatgggcatc gcgcacctcc ttgatgaggc
    33601 acgaccctaa cagacgattg ggaacgttta cgtgaggtag cggcagcttg cacaacgatt
    33661 caggaaactg tgatgctgaa tgcggaccgt catcacatga tggaggcagc cttcagggca
    33721 gcatccccaa aaattcttgg tacaccgcaa tgcccgatac aggccttttc tacgttctag
    33781 atcttgatgc agtacgcgac cgcgatggca acctccaccg cgtcagcgca atcagcgtcc
    33841 gttgcaacca ctgcaagcac atcacccatt ccaagacgcc gcagttggag accatgccag
    33901 gcggcacctt actcgcgtgc gcaggatgcg gcgaacgtca ggccgtcagc aacgcccgcc
    33961 tagtcgagtg tgaccacgtg ctgggccacg cgttacccgt cgcgttgccc gcctgactcg
    34021 cgccatgtgc ggccgattcg tccagcactc cgccccaggt cagatcgccc ctaggtcctt
    34081 gaccacggcc tgcccctttt gcaagaagcc agccagcagc tggccgcccg cgacctgccg
    34141 gaccatctgc tcattgaggt agctggcctg gaggcgcgca tgggccatca gatcggtctg
    34201 ggccatgctc ggcgcctccg cctggagcgg ttcgccgggc gatgcaagtt gcccgccgat
    34261 cggctggacc cgggccgggc gctgactgtc gttcttggca tacgccgtcg caatcattcg
    34321 cccgttcttc ggcgaccagc cgcccagtac caactcggtg ccgagctgct caagcggcag
    34381 gccggcctct gccgccgcct tctcgtaatt cggccatagc tgatctacca ctaggcccag
    34441 ctcagcagaa agctgctcca tcgtaaaatc tgcacgaaag ctggcctgca gcgccagctc
    34501 gtagatgcgt agaaagaact gggtagaacc gcgcgttgcc aggaccaggt tgtgctgagg
    34561 gattagcagc agcttcgcgc cggcagaatg cactcctgtt cgggcatcct ctgccagggt
    34621 atccactgcg acgaccaagt ggtcacgggt gagcagaacg ttgaggatac tcattggaca
    34681 agttcgtagg cccgcgccga ctatctctgc tcttcagcca tctgtctaga gccaccaatg
    34741 tcagaagcaa tcgcagacgt actgcagcgc cttgaagcct gcgagacgtc cttggaagcg
    34801 catcgcggct acctgaaggc gttcgagtac ggacttcgtg cggcgataat cacccatccc
    34861 agaccggaag aactttgccg cgtctggacg cagttgcttc ctgggattgc agagaagcat
    34921 tccggagatg gtggcgccat ctacacggcg gccctgtagc aggcgctcgc actgcttaca
    34981 gatcagatcg tggcaccgaa ctagatcagc cgattcccct tatgcccgac gtgtgccgcc
    35041 atctctccac cttgcagcac cccgttggcc acatggcatg gggagtagcc agtgccagcg
    35101 tatccgaaat cgatgcgaac gcattgcgat cgcatggccc gaacatgacg aacgcaaagg
    35161 aggttagccg acggctgatc gaggcggtgg cgggatccat cgggcacctc ccaccttcag
    35221 agcacgagcg aggtcactgt cacgtcgcga tccagaaggg cttgagaacc gcccccaagg
    35281 gctccggctg cgcaacctgg ctcttcctca agcatctatt agcccaagta cattgcttgc
    35341 tccactccct cgaacctagg aggccactct tgatcgcggt catccggatc atagcggtag
    35401 ttcgaactcg agaagacaat ttggactcca taagccactg aaagctgctt aagcgcagcc
    35461 acgtaatttg caaaatcttc cttcttaatg tcttgctggc gcggcgtatc gagcaagaag
    35521 aaccgtggcg aaaaccggtc gttcattaga agaatctcca gtgcagccgt cctaacagct
    35581 aggacaagcc tcgtctttgt actcccctta attgccttaa agttgtcgcc cacgagatcg
    35641 accccgaagt cagagtcaat tgcaatttgc ttcggcatgt taactgcgtg caacacgctg
    35701 agccaatgcc gaattctctc ctccaaggct gacttgacct tgagtagaac gagatcaaca
    35761 ttgccaggac ctcgcatgac attcgagagc tcgtcgtggg tacgacttct tgcgtccaac
    35821 tctgccacat aggactgctc ctcctcgtga agctgagcct ccagcagcag gtccttcttc
    35881 aacactatga gcctctccgt cactaatgcg gtagcgtcga ccaagctcgc ggcatgaatg
    35941 tcagtttgaa gcaattcctt ctcctgcacc ttctttccca gctcccgctc agcctccacc
    36001 aagctttcat ccaatcgcgc aaccgcgtcc tcgtgaaact ggcgactgcg ctccagatcc
    36061 ttcaactgat cttttaagta aagtaagctc tttccatacg attcagagct acggacaaag
    36121 agcccacatg cctgatttgc gcaaacggaa tcaaaggacg caaagaccgc tcgagcctct
    36181 tcgttcagag atagcgtgtt cgcttctatt tcgatctcat tgctaatcgc caagaagcta
    36241 cttagcctcg ctctatgctc ggccttgtcc gcaatcagag cggatacgcg acgcctcaag
    36301 agagcaattt ccccatcaag ggtcacttcg ctctcggacc gggcgtctcc cccttgcctc
    36361 agcgattcga atgagcgctg cacctgagct agctcgtccg aaagctctgc ctcactacga
    36421 cgtggatgag tgacatcaga tgcaagctgc ccaatagtac gttggcgtcg aacaattgaa
    36481 agatcgaggc gctccagccg ctcctgaagt tcgcgcctga gcttgcgctg ttcgaaggga
    36541 ttcttggccg gaagcccaaa cacagaacgc atgacctcgg catactgatc cttgatgaac
    36601 ctgctgggag taaagtaaaa actcgaataa ccctcatcct gatccaagta aaacaacggc
    36661 aacacttggg agacgtaaag ccgggtcgca gcaccggaaa cgctcacgag aacagggtcg
    36721 gcccaccccc acagctgaaa aatgtaacga ctgaaatcag cctcactgtg gaaggcgagc
    36781 gtttcagagt caccccccaa cggattgcta acctcaatga ggaacgcccc cttaaagggt
    36841 ctacggaaag cgtagtattg atccatatga actactgtaa ggactacaca cttacagcgc
    36901 tcgttaatat cctccctaaa acttgcagga tacccaagcg caaaaactat ggattgaacg
    36961 acaggcgtct ttcccgcccc attgtcgccg aagagctggg tcacttgatc gccaaactcc
    37021 agcactccag agccccatcc ggccgggcca tcggcaatga tctccaagct cacaaatttc
    37081 attgcaaatt gatcctcatt tggcgctcat tacggagatt tctgtagctg cggtccatcc
    37141 tgtaaaggtt gaacgctaag tcgccatctt gtttgagcgc cacccccact acgcgctgac
    37201 cttcagctgt tgcagctata gcccgatccc cggccctcac ggagacgagt cctgcagcct
    37261 caagaaaagt gagtgcttga actgtccgca accgaagagc agccgaccaa ccaagatgct
    37321 gtgcggaccc gcgaaagcca gcgaaagttt cttcgaaaca ctcaccaatg agctgcccga
    37381 ttgaatcgac cttgggcttg ctacggccct tacagatcat aagaattgtg atcgcgatca
    37441 atggcaagtg gaacatcgcc tcattgctca gcctagccgg cgggacgggc tcagtattgc
    37501 tgaatgacaa ctcaagacca tctcgctcga tggcatcaaa aaaatcatca aagtccatca
    37561 gctcactccc ccacgcatcg actcacttct cacaagctca gcaaggacac cacctaaaac
    37621 cagctccttc gtaagcatgc ttcccagcgc gcttgatgcc cacttcgtca cgatttccaa
    37681 tgcctctccg cggatggcta caaatgaaac ctcgccgcgc acccatcgct cacgcacccg
    37741 tgcgatgtct tggagaatga attccatgtc tacctcatcc aaatggcgat aggttcgata
    37801 ccaattatcc caaccaacct tccactgaca cgcgctatcg ataactggct gcgctgcacc
    37861 tgccgtctcc agcttgcgct ggatgataga tgcacttttt agcgcaccct cgtctcctcc
    37921 gctgagaagc tgcaggtatc cacttgctga aatgctcagc aggccaagta gatcctccag
    37981 cccaatgcca gcgagctgct caagggtctg catctttggc acttgggcca tcttgggata
    38041 ggactttctc tcaaccagcg cgacgagatt tgccgcaatt tgcgcacttt ctgaatgcgt
    38101 caagtcgatc tcgctgtatg tgtagatcgc cttcgacgcc aaggcttcgt aatcgccccc
    38161 accgggctgc aagagagtga gtccgggctc aattgagagc ttcgaaagac gcagcttgat
    38221 ctccccaggg cagagcgggt cagcgatctt gtacgcggaa ttgaaatgct cggagagcat
    38281 actcagaacg tcattcggct cactgatgcc accttccagc gccgcgaaca ccaactcgac
    38341 ctcgtcattc aggttcgcgt tggtgagaaa gctgacctgc tcgcaggatt cgccaaatct
    38401 gacggtatga agaagaagct tgcccaagaa gctgtcagct attcgcgatg acaggtcatt
    38461 gctgtcgtcc acgttacccg ccgagtcgtt tgtggcaact gcaggcgtcg ggcatacctt
    38521 cttcttggat acttttttct tctttgactt tgggatgcca aagaggtcag cgatcgacca
    38581 aagatggttt cgcttaccaa cggttttaac ttggaagaag cggtagaagt gagccccacc
    38641 aacgcttcgt ctactcacga agtcatcgtg aaattcgcag taaacgcggt caatcgactg
    38701 gcggtctagc agtttgaggc actccatggc cgcagcgcgg tactgcgcct gatagcgggc
    38761 gatggtgtcg cgaccaactt gctccgtagg tgctacctga tggagttgca ggtccttatt
    38821 gttgtcgctg cctgccatgg ctccccccta gaatgacagg gggatggtgg ggctcggaac
    38881 accggtaagt caacgtgcca gggacaatcg ctcgagctcc agagccccct acacgtccat
    38941 ctgcttagag ttgccggaac tcggctgatg tcggcctgtg ccaaatgcaa agcgagatct
    39001 cggctaagta tggcaactat caagcattca gaggcgtcta agcaattgaa tgttggtgac
    39061 cccgcccgat tttcgtgccc ttgcaaaata ggggacagga ccgcctgtac cacggcatct
    39121 ggccccgcct gtgcaagcca tgtgccaagt cgcctcgcgg gaccgtcgcc acatcacctg
    39181 agccattctc aatgccgagc ccccttttag gcctgacaaa actcagttga tggggtcagt
    39241 tcggtaggca tagtgactgt ccaccatgac caccgccgtg gggcctacaa aggcgactac
    39301 caggccgcag gaacacgcct cgccgacctc cccgggacac ccatcctcat ggaggaggta
    39361 gtgccgatca atcctacgga tgaggtcctt ggccagccca gcgcgcgtaa tcaggtcaac
    39421 gtagtccagc tcgccctctg ctggaaggac ttgggcgacg tcacatagca acatgggacc
    39481 gctcctttaa gggctccaga aatggactgc tcacgattcg atccctctca ggatcgctgt
    39541 cagcaggcgc aaagccggac gctcccctcc tttccaggcg ttcctactcg tcaccgcctt
    39601 cccggcctcg gtccttggtc ctgttgagta ctcccacgga cgccaagtcc ggattgcctg
    39661 cgcttggcgc tgtcgacgtt cgagggtcca accattggcc attcgctttc tcctccaata
    39721 gtacgttctg cacgttttct ctcccgcgcg gccgggcctg acccgacctt tccgagactt
    39781 gccccggact ttccgggccg ttgtttacct gttggtgccc attggcgatg ttggcctgct
    39841 tcacgaaggc caccgttcta gggttccgga tctccgcaag ggactccagc gtagagcggc
    39901 actgggactg ggcctttaag gccagccgca tgtatgtctc ggtcgccctt aggtggctac
    39961 ccatgttgag ggccgctcgc cgactcatct ccagaaacac cgcgttgaga gctatggcct
    40021 gactggtgag aagtgagtct gcctgctcgg ttcctccccg cttagctcgc tccactgcct
    40081 gctgagtagc ctctacaagc tcgccaatct ccgaaccctt ggcaaagcca gaatgctgcg
    40141 caaacagaag ggccaggaac gcgttgctgt taaccccatc tgccagttgc tcggcatgga
    40201 gctcctcgtc cgattggcca gggcggcgtg tgatcttcag ctcggcgatg cttgggtcca
    40261 tcgggtactt cccctcagtt gtctcgttca aactgctgga cctatgtgga cgccgctgga
    40321 cggcccaacg cgcgcgtact ggtctcaaaa tcggtggtat tcggtctaag gtccgcgcca
    40381 gcccagtggt gtacgatccg cccaaacagg ggaggactca tggacagact gttcccgacc
    40441 gcgctcgcct ttatggcact cttgacgacg acctgcgtca cctccgccca gacctatgag
    40501 ggaaaggagg gagtcctgta tgcctgcgtt cgagatgggt tacggacgta cacctctacg
    40561 cccctaccca ccgacagtgc atgccggacc atcaagtacc gctgggtgga caagcactct
    40621 gtacagcctg acccgcctgg cacctttatg ggctacaagt gctcctcaga ctgcagcggg
    40681 cacagggcag gctatgcttg ggcctcagag caaggcacat cctcggtgca gaactgccga
    40741 gggagcaaca agtcgttcgt ggaaggctgc atggcctatg tgacatccaa gaccaagcgc
    40801 aacggcgcca agaccaactg aggcatcgct atggactgga agaccaacaa ctatgatccc
    40861 cagaagagct gggacaccat gaagagcgag gccttcaacc agcgctaccc agaggggaag
    40921 gctggcggta gatccatcgc cttggccatc atcgccgttc ccctgggcct cgctgcagtc
    40981 gctgggctgg cgtactcggt tctgaccttc ttcggcggct aacggccccc ggccgcctgt
    41041 gccttcaggc gctgagccag ctcaaccaac tcgtcgtcgt cctcttcctt gccgatctgc
    41101 agcagcgtgt tgatctgccc ggcaatgtcg ccgctatccc gttcggtgtt cctggcaagc
    41161 cagcgaaccg ccttggggtt ggtcatcatt ctggcgagca ggttgttggc gccagccagt
    41221 gccaaggtcg acgcgacggt gattgcggct tggcccaaat ttccctgcaa cacattctgc
    41281 ccggcgataa ggcctgtgcc acctagggtc acgccgagcg cagtctgctt ggctgtgcct
    41341 ggcggatttg cgaacacctt gctcccactt cggatggagt cggccatcct cgccagctta
    41401 ttcacgttct ggacgtagtc cgtcccgaag cgcgcattgc tgaatagctg tttcttggcc
    41461 tcggggctga tgtccgccca gttgctcaag aaggtctcca ttgagaaggc gtcgccggca
    41521 gcgttctggt tggctttgct ggcgcgcccc attcgctgca agaaggacgc gcttacgtcg
    41581 gcgcgtacct gcgcagggag cgagtccatc acgcgcttca ggggagtggc gccattccgc
    41641 gcaccagtga acatggcttg gtaggcggcc tccgggcccc cttccttctg gacgatcttg
    41701 ccgatagcgt ccaaacgctg ctccctgagc cggtagtagt tgttggccat ggcgaaagcc
    41761 ttctttgcct ccggcgttgt ggcggcagcc tccatgtctc gggaaagcgc tgcgtacagc
    41821 ttcttccact cagcatgggc ggcgtcacgg gtcaggaacg tcgcaccgac ttgcttgccg
    41881 acctttgagc gcagctcctt gagcgcttgg tagggcagcg ttccatctgc catgttcccc
    41941 aaggtgctat tcaggttctg ctcgatatca gctcgggtcg gcaccggttc catcactgtc
    42001 attcccagcg actgtctgcg tgcatttctc tccgatgctt cctgagcttg ccgctccaag
    42061 tactgcctgt aggcggcagc attctcacgc atccctggcc ggctgaggac cgacgctcca
    42121 cccgtggtgt cgctgaccag cgcacgctca atctgcttaa gcgccgcttg atcgaacagg
    42181 tgggaaagct ccggcgctcc gttgatcgca gcgttgattt cctgaagcgc gccccgggca
    42241 ttggagacgg gaaccatttc accggcgggc agatggcggt ccagctcgct atacaaacgg
    42301 tccgaaactg actgggttcg atccacgaag ccaccgggcc cgtagatgcc ctgttggacg
    42361 ttagttccga cctgagtcgg ggtcaggtcc gcgccaccgg ccgagatcct gttggacagg
    42421 tcatcggtgg cgcgacgcgc tgccgccgcc tgatcggacg cgcgctgggc aatctggccc
    42481 gagccacctg gggtattgcc aaggtaggtt tcaagggcac tagcgctacg attgccagtg
    42541 gcttgcccga cactgggcga ggtgccggaa gctgcgaagt cgtcaatcat gctctgcacg
    42601 cccgaggcat cattccccct agtcacgcgc cgcgcgacgc cagctgcagc ggttggcact
    42661 gtgccagtgg cgctgacccg accagctgtg gcgagactgg caagtccgct caaggtgcca
    42721 ggcgcaaatc caccagccag acccgcgagt agctggttgc gctgagagcc accagcctcc
    42781 ttggtcgccg aggccgcagc gctacctgtg atcgctgacg cagtctgaag tcccggctgc
    42841 gccgtcagaa agttagccag acgattggcc acaggggcag cgctctgccg ccccatgttc
    42901 gccagcatgt tgatgccgcc gccaatgccc atggtcaggc cggtgccagc cacggcctcg
    42961 cctacgtcgc cccatatccg atcgccagcc gtctgggcct tgggaagccc cagagaatca
    43021 gccagtgctg cagcctcctg ccgatatgga cgggcttcct gagcgcccac agcgcgcgca
    43081 accgggttga ccaaatagtt gttgaaggca tcgccaccga ccacacctag aaggctaccg
    43141 gcgctctgga ttaccgagcg agctccaaag gccgcatctc gtgctgcacc atatcgccat
    43201 ccatccggtg ccacttggct gcgctgaccg gcagacgtcg cagcagcagt ggagcccgca
    43261 ggttccacca gctccccaga gaaccgtggc ttgttcttaa ccggctcttc aaccgggatt
    43321 ccgtcgaaac gagccattgt ttacctcttt cggtaggttc gaccatcgtc cgggtcgatg
    43381 tagagagagc cgctcggaag agccttgaag tctgcgtccg tctggggacg ggcggtgctg
    43441 gcagcaggct cggagccgcc actgacgctg ctcgtgaccc cagagaagtc ggccatgccc
    43501 gtgccacgca ctgggtcgta tccgtactga cgtgcaatct cctgatactt tcgagtggtc
    43561 ccggtaatcc gcccttccgc attctttgcg agctgggagg cctggttgag gaaatcttgg
    43621 cgctgcgtgg ggttcagccg ctggccacta atggccttgt tgtacgcatt gcgcacctga
    43681 tcgggaacac ctgccgcatt ctgcgcattg gcgaattcct gctcgcggac caccgagccg
    43741 gggtcgagca tcttcatgaa cgcaaagatc aggctcaggt cgccggctgc gctcggctgg
    43801 ctggccgccg cctggacgtt gcgatacatg gacaggacgc cctgatcttc cttgaggttc
    43861 tgagtcacct ccttgcgaag gctctgctca cccgtggcga ttgcttgggg cgatgagttg
    43921 tcagctggcc ctccagggat gggcttcaac gtgtctgcct gatagacgta cccttgtggc
    43981 gcctcgcgct gcttgggcgg gctgtaaccg agtcctccaa acgaagagac gtttcgaact
    44041 ggaatttctg cggatccgcc gtccggaacc aacccccatt cccccgggtt ttgcatgatc
    44101 gactcacgca gccctggctc ggttaccttc gacatgtcta cgatttcgcc attagcacct
    44161 cggaaaactg tcggtgctgc ggcggggcca gactgacctc ggtgtgcggc tgctgcaggc
    44221 agtggcgaga gttggcggga tctcgggtcc cagatcattt tcatgcttcc gcccattcca
    44281 tcgggcacgt caatcacatg ggcgttcgtt ggcgcttcgt agaccactcg gccatcagga
    44341 gtgaccaatg cgcctccaac caccttgttc tggctggtat cgctgccaag gttctggccg
    44401 aaagccgcga tgatctggtc tgcgacgccg tcgatacccg cctcgttgta ggccggctgc
    44461 tcgccgaagc ccatggcgtt caggcgcttg gagaggaaat tgtcgtagta cttctgccga
    44521 tgttcgctcg ggatcttctt ccagcccctc gccattccaa agagctcgct gcggttgcgg
    44581 tcttcctggc tttggaactg ctgctgctgg gcctgagctg cctgcgggct gatctgagcc
    44641 atctggctga gcagtgagga ctgatcttgc ggggcagtgg ctgagtagga ctggccggcc
    44701 agcatgttca ggcggttctg ctggccgcgc tggcggccga tatcgccctg ctcctgtacg
    44761 tacccaatcg ctgccagggg gccaaagttt ccggtgagtg cgtttgccat tgtcttgcct
    44821 cccaggcaga tgcgttaggc ataccaaaaa agaaggcggc aactctctgg gggttgccgc
    44881 ctggacccgc ccttgggggg acatggggtc ctactagata ggtcgggatt tgggtgtttc
    44941 tgactcccgc gtccaccggc gtctatggcg gtccactagt cgtgcacagc gcccattgca
    45001 gcggcaacgc ggcgactagc ccgatcaagc cagtcgagca gccgcttctc ggctgcctgc
    45061 acctgcctcc ggaatcgact ctcctggcag gcctggtcct tagccgcttc ccgataggac
    45121 ctgtgccgat ccccgtccag gatcctccgt gccgcttccc acgctaccca ctctgggtgg
    45181 ccacatgcgg tcatgtatcg acacaccaac ggccagccac tctcgtcgcc taaggcgtac
    45241 agcatcagcc atgccgctaa tggtccatcc aaccgagcat cgaccagcgc atgcagcaca
    45301 ggcctgctcg gcccccttac aggcgcggcc gtaagcgagc cctgcgtctt ccaactccgt
    45361 agctggcgag tacgatcagc cgcggccggc gcgcgcatca ctgccttctg atcaaaatcc
    45421 agcaccgatt ggcgatcctt cgggctgaac gtatccagcg cttgcttacg ggccgccgcc
    45481 tgcgtcggca ggtacttaga tgcggcctgc tcaatcgagt gcacccgatg gataggtagg
    45541 tacgcaccgt catccgggca ggactcctcg ctggagctcc gcctcgtcgc atgccggatt
    45601 gtgggccgtg ttggcgcccc gaagccaaac gcgccagcga tgctcctcac aaccaaatcg
    45661 actgcctcgt tctccagcag caccatctcc aagtaccgct catggtctcg agatgccatg
    45721 ggcggcctcc cagtgcgacc cgtccggcag acggactact ccgcctggcg aaccggttcg
    45781 cgcttctcct tggaggcgtc cagaaacgac cgccgtggct tgaagcccta aagccaatgc
    45841 cttgaagcaa gaagagcgcg ttccgcttgg tatatatcta gaagggtgta cacatagcga
    45901 cctcgaatgg gtgtggataa ccgcctgact agcctgcatt gcgacctcgt aggtctctat
    45961 gtgggccaac tcatagcggg attggcctgc atagcgacct agttggccta catagcgact
    46021 acccattgcg attcctccac aggttcagtg gagttacggt cggtggctca aggtgctttt
    46081 cggactcatc gacggcgtaa taggtcagtg cgtacaggct gcacatgttc ttgccacctt
    46141 tgcgcgtctc gatgatccag cctgcggcaa ggagctcaag cttggcgccg tgcaccgtcg
    46201 ccttgctcct ccaaccacgg gtcgagagca tcgaccaagg gatgctcaaa tcgccgtttt
    46261 tgccaggcct gtattgtcgg gccagttcca gcagcagctt tacggcgtta ccagatagct
    46321 ggccgaactc cggcgagtcg gaaatcctgt gctcaagcat caggaacggc gcgcccttcg
    46381 atcgtcctac gagcttctgg cgccgcctgt cagtgttctt cttgggttgc gcctggccat
    46441 agctggcgtc gccctctgga gaccgctggg cgcggtcttg ggttgtactg tgcatgtgcc
    46501 cccccaaggg caaggaacac ggcctcagcc gcgcttagga cgtttggctc tacaggtcgt
    46561 ccctgcatcc acgtgacgcc aagtcttctt cttgcggatg cacctgatag ttgaactatt
    46621 cacgccgtag cggcgcgccc aaaccttggt tggaacgatt ccaaccgtac gcaagaccgc
    46681 ttcaacctct gcaacgctga gcttgcactg ggaggagggg ctgccgtact tggctatgct
    46741 ccgtgcgcgt tgaagtcggc gattctccga gccagtcacc aattgcaggt tgtccaactt
    46801 gttgttcgat gaatcaccat cgagatggtc aacctccatc gttttgggta caggaccgtg
    46861 gacggcctcc cacacgagcc tgtgggcata ccaggtcgtg caggaaccgc ctgctcggcg
    46921 gtcaatgacc ctgatgtacc cgtcacggct cctcctgcct actgcacgtc cacaggcgct
    46981 ccatagctcc ccggtactcg gcgagacgag gaggccgctg gcttggtgca atagcctgtc
    47041 agtcgcgtta ggaagcattg ggggcctccc aaccaatctc ctgagtgcgg caccaggcga
    47101 ctgcatgctg ctcaaggaga ggcttacgat cccgataggc catgccttgg ccgatccaga
    47161 cagcgttctg catcctcagc tcctgctgga gcttcagttg atcggtggag agggagtcct
    47221 cggacacgcc atggaacacg ccggtgatgc agtggttcac gagtcgatgc tcggtggcgt
    47281 agtcgtaccc cttcgggtcc cggcccagcc caaccagcgt gtcgtgcagg atccggcaca
    47341 tcacggtgcc tgcaacgcgc tttgccattg ccgcatcctg cctagtgcca ctcgagagga
    47401 atgccgccgc gagaacgtcg gccgcctgct cctggaacag aatcactcgc tccctgatgg
    47461 cagccttcac cttgttaggg ttcgctgtgg ccagccagaa cgggagccta gacaggggca
    47521 gtgcctgcat ctggcgacct ttgccatcac cggcaaccat cccccttaag gtagacagtt
    47581 gccgggccaa cacggggtga gatttcagct tctcaagctg cttggaccaa tccagtccca
    47641 ttccttccac gatgggccgc atggccacaa agggttgtcc ctgatggaga cggccgatga
    47701 gttcggcacc gtggaactcg acgtgcacga ttccagtagc cattaggctg ccctcccctc
    47761 ttcacaatgg gagtcgatcc agcaccgcac agcctctgag tcccaagcag acaagcgggc
    47821 agctactcgg ataggtcggg gaaaccggcc ttccttcgcc atcttgtaga taagagagcg
    47881 ggacatgccg caagccgcga tcacctcggg caggcgcatt agggttcggc cctgagcggc
    47941 cacgcgtcca agccggatag catcggaggt cataccgagg tctccttatg ctgagcccaa
    48001 gcccggcggg ccgtgtccgg cacccggtac tcagtgaggg agtaagagcc gtagctgtca
    48061 cgcctccgaa cgctgacagc gagaaggagc ccgcgctcga tcaagcccca ggcatcctta
    48121 cggcccggct tggtctcggc atgggggtga tctgcggtcc agccaccaag gtccagcaga
    48181 cgtcgctgat ctgcgctcag atcggagaag tcgaatccgc tcatcgcacg tcctccagtc
    48241 tggaggacag cactcgctgg agatcgacct cagggatcag ggatcgagtt ccaattttga
    48301 ccgagcggat ctcgcccgct ttgatcaact cgtagagggt cgtccgactg acgctgagcc
    48361 ggcggcaggc gtcggggatt cggtggagca gggggtcgag agcgttcgtg gagatgacca
    48421 ttgtccgtac ctgttagcag ggtacgaacc ggtgtccgca cccgcccgga tgtgtccggg
    48481 cggatgtaaa actatgcaca tagacgtgct acttgaaggg ccaaatgagg ccctcatttc
    48541 ttccggaaga atgcctactg caggattctc cggaagaaac tatccacttg cttcttcctg
    48601 accatttgcc tccaggtccc ttgcggcctg agccgcaagg ccctccgcag tggctgcggt
    48661 caaccaagct cgcatccccg gccgatacgt cttccgtatg tcgtccactt catacttgcc
    48721 cgggtaaacc gtctcgcaaa gtgccccaag cgtaggcttc tccccggtga tcacagccca
    48781 cgcctctata agcgcgagag ggacgtagcc cctctctatc caagttacga agtccgcttt
    48841 cccaaagcta cgttttgcag ctacgtggtg atcgagcttt cgcatatctg caagccagcg
    48901 cttgaagtct tcgacaatga tgtcgtcagg cgcactaagc ctgaccgaga ttgctctatt
    48961 tggagtcaag ctgctccctc tttctgatag aagatcagaa tcacgaagcg tgacgaagaa
    49021 tggcttgtcg ccaaactcgc gctgatcccc aaggctacga ccgagacgat tcgccttcga
    49081 gtagtcgcct gccatacgag cgtcctcagc ctgtttcagt gacctcatga acttttcacc
    49141 accagggagt cgcgcaaggg tcgctcccat ccaagcaaca gcatgattat ccaacgcctg
    49201 aaccgttccg aatccgaagc cgtgaatcgg gcgcagatat gatctgatcc gccaacttcg
    49261 cccagtactg aacttcccct cctgtagggc aatgaatctc tcggttagca gcctcacagc
    49321 tccgtcccgt ccttcgcccg tgatctcgtc tggaaccctt attttcatta gaggaatgag
    49381 tcgatccaac agaagaagcc aaccagcagc atctaggtcg ctgaggtagt tgtacttctc
    49441 aagctcaaac caagacggga tacctttccc actagctttc cgcgccatct cagcccccta
    49501 cctgacgttc tctactacgg tcacttgggt cctccactcg acaccaagtc catcactaag
    49561 gtggtgcatc aaaacatcct caatcgagaa ccagtactgg acggtctgta cggtccggaa
    49621 taatggcttg aatggcgagc agctgcctag aggcatactc ttcggcactc accgaagaca
    49681 agtcagtcag ggctgattcg agctgctcaa acgtgtagtc cggccagctt ttagtatcaa
    49741 gcccacgtat caggacctcc ctcagaagcg atccacgccc aaagaatcct tctatcaccc
    49801 cacgttgccc ctccgtaagg cttccgccat tggcctccac tgcagaacaa acaatattgg
    49861 ccagatgggc actcccgcta gtgcgagggt ctgctacagc agccttaagc gcctgaagga
    49921 aagcgataca gcagaccctc cccagctccc tgcccatcag atgaccatgg acttccggca
    49981 tccgccaata atcacccacc tttgcatggc tctggcgata gaaggggagg cgctggaggg
    50041 ggttcgcacg ggtccggttg aagcggactg ggcgcctatg tcgaggcgtg ctcaatctat
    50101 tcacgcgacc ctcctgatct tcgtaacggc tttgactgca gccagaatgg acaccgactc
    50161 gcgcggcagc acttgccctt gatccatgag cgacaggcag tacacgtaaa gtcctccacc
    50221 gcctcggtcc tgtacaaagc gaacaacagc ctctccgttg atatctacga cgtagacgcc
    50281 gtcatatccc catcgggtaa caccgagatc gaccaacaga acgtcgccag cctccaaggc
    50341 tggtgcgttc agatcatcct tgacggacac gtaggcgaca cttgccccag tgcgctcgcc
    50401 ggccgagcag tcacccacac agaccgcctc catggccgtc gactgactga cgagccctcc
    50461 tccgttagag cttgttatag cttggctgat tgcccggctc acaggacctc ctcgatcttc
    50521 ttggcaacag cggtggccct ttcgttgacc aaattgacca cagcccgaac cgcaggaggg
    50581 atcgccgact ctcccatctc gccggagttg aggagcaggt cggttacacc ctggatatcc
    50641 catacagcct gtgctgcatc gttgagcgca tggcgcagct cagtgagacg ctctttcatc
    50701 gctgtcgctt ccattagtcg accctcgatg cgcggcggag tgcttgggat tgctccaaga
    50761 gatggtccag aacggcaaga tcatcgaacg agggaaccga gtcgttctcc atgcaagtct
    50821 tgaagaagga gcgaacaaaa ctgacgtaaa ggctggcgtc gccaagtgcg tgcagtgtgt
    50881 cgatgccggc gcagatcttg tacgtgggtg cgttgtcctg cactgggatc cccccatacg
    50941 cggcctcaat ggtcacttca gaagcagcca tggatcacct ccaggcatgt agcgactgac
    51001 gtaggggaag cagtggccaa cgccagggcg gcgacaaaca gcaccgtgca aagcttgtat
    51061 gtgttcgcgt cgtcgttgag ggcgagccac cggtggactc ggacgagcgt gattgggcga
    51121 gttgccacga tggtgtttga tggccatttt ttggccgaac gcgcccgttc aggcgcaaca
    51181 agtacaatgt cgcaatccat gatcgactct ccaatagtcg gttgtggtag gccgagctag
    51241 gggttccagc ccctttctcg gccgctttgt ttatgcggct gtgcttcttt gtccggccct
    51301 ccttaaaagc ctatctccgg tggttaggcg cgcttggctt tgaaggccag cacgttcggt
    51361 tctgcaacgc gcagctggtc gagatagtca gaccaggctt gcatcatctt ccggcgttcc
    51421 ggcaggtggg ttgcccggtt gtaggcgcgc ccaagcggat cctttaccgc atgcgccaac
    51481 tgatgttcga tgtagtccgg gcgatagcca agcacttcgt ccagcaccgt tcttgccatc
    51541 gctcggaagc catggccaac catcgtgtct gagtcgaagc caaggtttcg gagcgccgcg
    51601 ttcatcgtgt tctcgctcat tggcttcagc gagctgcgga cgccaggaaa gacaaattcg
    51661 ctccgtttcg tatacgggta cagctcccgg agaacctcaa cggcctgttc tgacagaggg
    51721 acgatgtgcg gcgttttggt cttgctggtg acgtagcgcc attctgcagc atcgaggtcg
    51781 atgtcagccc acttcgcctg cctaagctcc ccagggcgaa caaacaccat tggtgccagc
    51841 tttagagcag cttgcgtgac cagtgccccc tggtagcccc acagcgcgcg caggaggcct
    51901 cctataacgg caggatcagt cacgctggca aagtgcttgg tctgaggctg ttcaagcgct
    51961 cctgcgaggt cctgagcggg atttctgtca gcacgacccg tagcgatggc gtagcggaag
    52021 atccgcccgg catgtgccct ggcgcgatgc gcggtttcca caacaccgcg ttgctccaac
    52081 ttccgcagcg ccgccagcag cacgggggcg gtgatgtccc caataggcag atcagccagc
    52141 ccagccagat ccttctcgat cagccgacgc tcgcgcacga ccgatccagg ggaaaggccc
    52201 tccttcgttc gcttggcgag caattccaag ccgatggctc cgaaggtgtt cgcggaccgt
    52261 tctccttgga ctgccttttc gaccctggcc acttgagcgg gattagcccc gccgcgcagg
    52321 agcgagcgca gacggtcgcg ctcgacgcgg gcagcctgca gcgacatcga cgggtactca
    52381 tcgagcgtga cgatgctggc ctttcccaga tagcggtagc ggtagcgcca caccttggct
    52441 cccgaggggc gcacttcaat gcacaagccg ttggcatcag ccacacggaa ggggttggcc
    52501 ttcggcttga gcgagcgcaa cttggtgtcg gtcagcatgt gagtcgagcg cctgtgagtc
    52561 gtctaggggc gtctagcccg ctgacacaca gcctgactca ctttttttgt ggatgcaagt
    52621 ggatgccgct ggacggctat ggatgcgttg cagcgcttaa attaagcagc tcaagggttt
    52681 cgtggacgtc tccggacttc tctggacgtc aatgtggtgg gcccaccagg attcgaacct
    52741 ggaaccaagg gattatgagt cccctgctct aaccgttgag ctataggccc ggcgcagcgt
    52801 cacagtgtag tggaggccgc gctcgatcgg ctacccggcg gcggcaagcg cctccgaaat
    52861 acgccccagc cgcctctccg ccgcttccgc gagccatacc tgccgcctca ggtatgcctg
    52921 gaacaacgcg accatcctgc tgacttcctc cagtccctgc tggttgtcgc cactgaagcc
    52981 ggcaagcaat ccagcccccg accgcgtcag caacgccagt gttgctcgcc gggcgaatcc
    53041 cagcgggtca tcgcgctcat cgcgcatcac gtcgtcccag tccaacaacg gcgggaagtt
    53101 gcagccctgc gcatccgatc cacccctgcc gcacgcatcg acaaccatct tcagttccat
    53161 gctcactctc ctacgatttg tcgaacctgt tgcgcctcct gttgagagag gcgaccgggt
    53221 gcttcaacac ggtcgtaggg ccgcccgcag cttttcccct tgcggggtct tgtatcgctg
    53281 cgcgccaccc ggccagaaac ccttgggctc accgggatgg cgagtgatgc ggtttgacct
    53341 tggattgcct gctgttgcgg cagacagtcc gcctacgaag gtgtgttgag cacctgaggg
    53401 gactgtgtgg aagcgaaggt agtggcttca attggcgaat gcgacatggc ccatgccagt
    53461 cacacacagc gggaagctca cagcattgag ccacttggga tttccactgg atggtctcca
    53521 tccttcgcag cgcggtcctc aacaatcctc aggccagttg cgtcacaagg tgcggcaagc
    53581 gactgccact cgttgagaag gtcttccgga tacgtcatcg cgaacagcag ccgagcatgg
    53641 ctcagctcta cagaaagcac aggcacccac caaagaaaaa ccccgcacca ggcggggttt
    53701 ctctcaacgc ttcaacagcc gctggaaatc aatcgatatc caggaagctg cgcagctgct
    53761 ccgagcggct cgggtgacgc agcttgcgca gggccttcgc ttcgatctgg cggatgcgct
    53821 cgcgggtcac gtcgaactgc ttgccgacct cttccagcgt gtggtcggtg ttcatgtcga
    53881 tgccgaagcg catgcgcagc accttggctt ccctcggggt gaggccggcc agcacgtcgc
    53941 gcacggtttc agacaggttg atgttggtgg tgttctcgat cggggactcc acattggtgt
    54001 cctcgatgaa gtcgcccaga tgggaatcct cgtcgtcgcc gatcggggtt tccatcgaga
    54061 tcggctcctt ggcgatcttc atcaccttgc ggatcttgtc ttccggcatg tccatttcct
    54121 tggccagctc ctccggcgtg gcctcgcggc cgtactgttg gagcatctgg cgggaaatgc
    54181 ggttcaactt gttgatcgtc tcgatcatgt gcaccggaat acggatggtg cgtgcctggt
    54241 cggcaatcga gcgggtgatc gcctggcgga tccaccaggt ggcataggtc gagaacttgt
    54301 aaccgcggcg gtactcgaac ttgtccacgg ccttcatcag gccgatgttg ccttcctgga
    54361 tcaggtcgag gaactgcagg ccgcggttgg tgtacttctt ggcaatcgag atcaccaggc
    54421 gcaggttggc ctcgaccatt tccttcttgg ccttgcgcgc cttggcttca ccgtaggcca
    54481 tggcacggct gatttccttc agctcttcca ggtccagctg ggtcagcttc tcgatgtcga
    54541 tcgtcgcctg ctgttcggcg atgatctggt ccttcacttc gcgcagcgcc gaagaccact
    54601 tctgcttgcg cttcagtgca tcttccaccc attccaggtt ggtctggttg ccttcccagg
    54661 aacggatgaa gtccttgcgc ggcatgcggg cggtaacggt ggccaggttc agcacgcggc
    54721 gctcatgcga cttgatgtcg gccatggtgt cgcgcagctg cttggtcagc acgtcggtca
    54781 gcggcagcgg cagcttcagg gtgacgaaca ccgccgacat ctcttcgcgc aggcgcggca
    54841 ggttcttctt gtcgcccttg gtcgccgcct tcttgaaggc agtgaaggca tcgctcagcg
    54901 cctgcatgcg cgcggcgact tcctccggat ccggaccggt cggtgcggct tcttcctcgc
    54961 caccctcgac atcatcgtcc tcgtcctcgt cgccatcggc gtcggcatcg tcgctgtcat
    55021 cagcagcagc cgcggccggc gccggggctt cgtccgtaag gtcgttgaag ccgacgatca
    55081 cttcggccag gcgcttcttg ccttccttgt gggcttcata gtcgttcagc agcgactcga
    55141 ccgacaccgg gaactggccc agggcggcct gcacctgcga aaggccttcc tcgatgcgct
    55201 tggcaatggc gatttcgcct tcgcgggtca gcagctcgac ggtgcccatt tcgcgcatgt
    55261 acatgcgcac cgggtcggtg gtacggccac cttcggtgtc gagcgcgctc agcgcggcgg
    55321 cggcttcttc ggccgcggtg tcatcgactt cgcggttacc tgtgttgccg tcgttgagaa
    55381 gcagggtttc cacatccggc gcaacttcat ggacatcaat gcccatgccg ttgatcatgc
    55441 cgatgatgtc ttcgatctgt tccgggtcga ccatgtcgtc cggcagatgg tcattgactt
    55501 cggcgtaggt caggtagccc tgttccaggc ccttgctgat cagttgcttg atttcggatt
    55561 gggcaggacg ttcgttggcc atgtagtgct cgcgccaccg gctagggaga aatagggaac
    55621 gtagcattat accagcccgg ggccccgcct gccgggcggt ggtcccgcaa gctcagggcc
    55681 tgagaaggaa ggtcacggga ccgtcattga ccaggctgac gaccatatgg gcaccaaatc
    55741 ggcccgtttc cacccccggc gcgtgatttt cacgacagat cccgacaaat cgattgaacc
    55801 cgcgttcagc ctcgtccggc ggcgccgcgc tggtgaagct cgggcgcatg cccgagcggg
    55861 tgtcggcggc cagggtgaac tggctgacca gcagcaggcc gccgccggtg tcacgcagcg
    55921 accggttcat cttcccggcc tcatcggcga acacccggta gcccagcagg cgctcggcca
    55981 tccgctgcag ctgggcctcg gtatcgccgg gctccatgcc gaccagcgcc agcaggccgg
    56041 ggccgatctg ccccaccgct tcgtcgtcga catgcacggc ggcctggctg acacgttgga
    56101 tcaggacgag catcgtgggc ttccgaatga acaggcccgg ccacgatagc agcgcccttg
    56161 gctaaactgg cgccgatgaa tccgcaacgc aaagcccggc tggtctaccg cgccaccacc
    56221 ctgttcgccc gcctgccctg gccgctgctg cggggcgccg cgcgcgccct ggcgtgggcg
    56281 tggatcagtc tcaatgcccg tgagagccgc gttacccggc gcaacctgga actggcctac
    56341 cccgaactgg atgccaccgc gcgcgaccgc ctgcaccgcg agctgctgcg ctccaccgcg
    56401 ctgcaggcca ttgagaccct gcgcctgtgg agccagaagc cggccgacaa cctgcgcctg
    56461 cacctgaagc agcgccatgg cgaagcgctg tatgacgcgg cgctggccag cggccagggc
    56521 gtgatcgtgg ctgcgccgca cttcggcaac tgggagctgc tcaaccagtg gctggcctcg
    56581 cgcgggcaga tcgccatcgt ctacaagccg ccggaggacg aggccagcga cgccttcctg
    56641 cagctggtgc gcggcggcca gaacgtgcag caggtgcgcg ccgaaggccc ggccgtgcgg
    56701 cagctgttca aggtgctcaa ggacggtggt gccaccggca tcctgcccga ccagcaaccc
    56761 aaagccggcg acggtgtgtt cgtgccgttc ttcggcgtgc aggcgctgac catgaccctg
    56821 gtcaaccggc tggccgagcg caccggtgcc accgtgctgt acggctggtg cgagcgcatc
    56881 gggccggaca tggaattcgc cctgcacatc gaaccgaccg atccggcggt ggccgacccg
    56941 gacccgcagg tggccgccac tgcgctcaat gccggtatcg aacgcatcgc ccgccgcgac
    57001 cccgcgcagt accagtggac gtacaagcgc tatacgctgc gaccggcggg cagcggcgag
    57061 gaggatccct acgccaccga agagcatccc cactagcggc cccactgagc ccgaccggtc
    57121 cctgcgaccg gcggccgcac cacgttgaat acgacgccgg cgcccccata gagactgcga
    57181 tgtccgcctc ccccggtcct gccatgcctg cttcttccct gttcggcgat ccggccgcga
    57241 tccgctgcga acgcgcggtg gccgaactgc gcgccggtcg cccggtcctg ctgcacgatg
    57301 gccagggcca acgcctggcg gtgatcgcgc tggacagtgc caccgccagc agctttgccg
    57361 ccttcgccag cgccgcgcgc gagcgccact acctgttcct gaccgccacc cgcgcccgcg
    57421 tgctcggcgt ggaagccccc gaaggcgcgc gcctgccgct ggccggcatc gccttcgatg
    57481 ccctgccctc gctgggctac ctgcgcgagc ccggcccgat gccggagggc tggagcgccg
    57541 gtgacgcctt cgatgccggc gcggttgaac tcgcccgcct gggcctgctg ctgccggcaa
    57601 tggtggccgt gcgcctggat gcaggtgacg ccaccttcga cggtgccgcc gaagtcgccc
    57661 tgtgcgacct cgccgagggc gcggcccatg cggcccacga ttacgaactg gtggcccgct
    57721 ccccggtgcc gctgcgcgac gttggcatga ccaccttcgc ggtgttccgc ggcggcgtgg
    57781 cgcagcgcga ccaggtggcg atcatcgtcg gcgaaccgga cctgtcggcg gtggtgccgg
    57841 tgcgcgtgca ttcctcgtgc ctgaccggcg acctgttcgg ttcactcaag tgcgactgcg
    57901 gcgaccagct gcggcgcggc ctgcgcaagc tgaaggaact gggcggcggc gtgctgctgt
    57961 acctggacca ggaaggccgc ggtaccggca tcgcggccaa gatgcgtgcc tacggctacc
    58021 agcacgatgg cctggacacc atcgatgccg atgcgcagct gggcttcggc gccgacgaac
    58081 gccgctacgg cagcgcggtg gcgatgctgc acggcctggg catctcgcgc gtggccctgc
    58141 tcagcaacaa cccgaccaag gcgcagcgcc tgcgcaatgc cggcatcgag gtgctggact
    58201 gcattccggt caccggcgag atcaccgccg agaacgagca ctacctgcgc accaaggccg
    58261 accgtgcggg ccacatgctg gacgtggacg cgctgatcca ggctgcccag taacgcggcc
    58321 gacctgctac cgtctgcgcg gtgcggccac ggccgccatc gcccgccctg ctgcctgacg
    58381 gagcccgcgt gaccgacgcc tcgattcctg caccacccgc ctccgactgg caggtactac
    58441 cgcaacgcgc ggcccgcctg gccgcactgg aaggcgcctt cggcggcctg ttcgtgccgg
    58501 gcctgccctt ggcggcggcg gcgtggttct tcgatctgcc cggcgggctg tggactgcgg
    58561 cccttgggct gctgatcggc atcgccttcg gtgcgtggct gggccatcgt cgcctggtcc
    58621 gcacgcgctg gcggctggat gcacagggcc tgggcctgcg ccgcgacctg atgtggcagc
    58681 tggagacccg cattcccatt tcgcgcgtgc agcacctgga cctgcgccgg gggccgctgg
    58741 agcgccgcgc cggcctggcc acgctgatcg tgcacactgc cggcacgcgc atgagcgcgg
    58801 tgaccgtcag cggcctggac gaggccgacg ccgaacgcct gcgcgacacc ctttcgcacc
    58861 agctcgacca ggacgccgac gccctgtgag cctgccgccg cccctgcccg catcgctgcc
    58921 cgacggtggc gaagaccatc gcctgcatcc atggtcgtgg ctgttcgtgc tgctgatgca
    58981 gctgcgccac tacttcctgc cgctgatcgc gctgctggtg ttcggccagc gcggcgatcg
    59041 cgatccgatg tgggcccagc tgatcccgtt gtcggccatt gctgtcctgg tactggtgtc
    59101 ggtgctgcag tacctgagct accgctaccg catcggcaac gatgcaatca cagtgcgcag
    59161 cggcctgctt gcgcgcaacc gccgcgagat cccgtttgcc cgcatccaca acgtggaagt
    59221 gcggcagaac ccgctgcacc gcctgttcgg cgtggccgag ctgcgcctgg agtcggccgg
    59281 tggcgcgcgc ccggaagcgg aaatgcgggt gctgaagctg gaccaggcct tggccctgga
    59341 gcggctggtg cgccagcgcg ggcaagcgcc gcaggccagc gaagcgattg cggtggccga
    59401 catcgccgac accggcaatg aacacgtgct gctgcgcctg tccagctggg acgtggtgcg
    59461 catgggcctg ctatccaacc ggggctgggc gctggcgatc gccgccgtcg gcgtgctgtt
    59521 ccagaccgtg ccacggccgg tgatggatga cgccctccag cgcggtggcc gcgaggcgtt
    59581 cggctacgcc agtcacctgc acccgggcgt ggccggcgcg ttccttctgg cgggcactgc
    59641 gctcctgctg ggctggctgg cgctgcgcgt gctgtcggtg gtgctgaccc tgctgcgcta
    59701 ccacggcttc acgctcagcg agcaggagcg ccgcctgacc gtctcggccg gcctgctcag
    59761 ccgcacccgc agcagcgtgg cgcgtcgccg catccaggcc tggaccctgc gcgaaagcac
    59821 cctgcatcgc tggttcgggc tgcgccagct gcgcatcgac agcgccgccg gcgggccttc
    59881 acgcgatgag gaccgtgccc tgcgcgaact ggcgccgctg gcatcacgca tgcgttgcga
    59941 gcagctggtg cagcacctgc tgccgcagct gcaatggccg ccggcacagt ggcagtcgat
    60001 tccgcagcgc ggttggtggc ggttgtgcct gggtgcactg ctgctggcgc cgttgctggc
    60061 ggcggccgcg tactggcggt ggggaccatg ggggctggtg gtgctggcct ggatgccgat
    60121 ggcactgctg gtcgcgcatc ggcagatggc acgcatgggc tggtacctgg acgatcacta
    60181 cgtggcggtg cgcggcggct ggtggaagcg ctggtggcgc tgggccgagc tggacaaggt
    60241 gcagggcctg cgcctgcagc gctcgccgct ggacaagctg ctcggcacca gcagcctgca
    60301 gctggatacc gccggtgcgc atggtgatgt ggcactgacc ctgcattacc tgccacacga
    60361 acaggcacaa cgggtgatgg aacagctggc ggcggcgctg gcacggcgca aactgcgctg
    60421 gtga
//
LOCUS       DAOKIP010000006        58849 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.006,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000006 DAOKIP010000000
VERSION     DAOKIP010000006.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 58849)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 58849)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..58849
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.006"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            <1..217
                     /locus_tag="QEL58_000336"
     CDS             <1..217
                     /locus_tag="QEL58_000336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005413599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDS1674859.1"
                     /translation="ALIGRPAVLLADEPTSALDREAATAFLQLMSAQCQAAGTTVVVV
                     SHDDGLQPLFDRTIALAEINHAGGAHA"
     gene            210..1463
                     /locus_tag="QEL58_000337"
     CDS             210..1463
                     /locus_tag="QEL58_000337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014647316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDS1674860.1"
                     /translation="MLELAWASLRSRALSVGLTVLVITLSVVLLLGVERVRAQAHEGF
                     ASTVSGTDLIVGARSGPVNLLLYSVFHIGDPTNNVSWQSYQELSALPQVKWAVPLSLG
                     DSWRGYRVVGTSGGYFDHYRYGAGHALAFAQGRPFDDLYDAVIGAEVAAAQRVGLGDE
                     IVLAHGTGAVTLATHADKPFRVAGILQRTGTPVDSSVLVSLPAIEAIHVDWRSGVQLR
                     SQSVSAEQARHLDLTPTSITAFMLGLNSRIATFSVQRRINEYPEEAMLAILPGVTLQQ
                     LWQSLGTAERALQLISAMVVLLGMVSLVALLVSTLQERRREMAVLRAIGARPGYIAAL
                     LVVEAVATSALACVLALAALAVASLAGRAWALTSFGLSITHVWPDGRELAWAAGVLVI
                     SAAAGLVPALLAYRRTLADGLSPGG"
     gene            1466..2026
                     /locus_tag="QEL58_000338"
     CDS             1466..2026
                     /locus_tag="QEL58_000338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014647315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3299 domain-containing protein"
                     /protein_id="HDS1674861.1"
                     /translation="MRCLWMLPMLLFLAACERPVDSGVQALPPSPVIDRSGAVAAGTA
                     EEQELDWLQMMPGDELAALERGEGPEVEHNGNRRMPQFGTFRTVDAVLERPVRLPGYV
                     VPLANAQDGRLTEFLFVPYYGACIHVPPPPPNQIVHVLLPRPIEMPDMYSPFFLAGTL
                     RAERLDDDLAGSAYTMRDAHLRPYEP"
     gene            2016..2642
                     /locus_tag="QEL58_000339"
     CDS             2016..2642
                     /locus_tag="QEL58_000339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3299 domain-containing protein"
                     /protein_id="HDS1674862.1"
                     /translation="MNREHVAMLVGCLCLAGCTQPVPNAAPVSTAQTAHSAQPTVADA
                     PINRWDALRPDEVTYQRPPPQIGLSRNGMDGVGGLIDDTGSGTPPGQEIDHSSPDRAR
                     QFGSSQVVDAADGRAVDLDGYVVPLGTNDAGLVDELLFVPFYGACIHVPPPPPNQIIH
                     VTLATPIALGDLWDPYRLAGRLQVKRFDADIASASYDAAAATLTAIHN"
     gene            2642..3388
                     /locus_tag="QEL58_000340"
     CDS             2642..3388
                     /locus_tag="QEL58_000340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005413595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674863.1"
                     /translation="MRARWVIVAGVLVSGVVLAMWWQRRAAVSEPPTIAFPAPAADAR
                     QRIEQRMIEEPAFRNDVLFLLAATLRDRCQPAQAGLLARMANRASLPVLAAVSTVTQQ
                     DPTLDRPIYQYIQHRADALRCGQPLQMPLAAGRSMDVDIEQYARTFPDSYFDPQRSSE
                     PRDFAGLSLQQRAGNACNSVVYSVLPLGGTDWRCSSLRANARGRVRGLCEDELRRQHG
                     GIGGELDMAVGQGMQAAVVSAMAALPEDCR"
     gene            3541..5073
                     /locus_tag="QEL58_000341"
     CDS             3541..5073
                     /locus_tag="QEL58_000341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012511201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDS1674864.1"
                     /translation="MALSQPLAGAPALSRARRWALLFTVAAGLLLVTLDNSVLYTALP
                     TLTEELSASAGQALWIINAYPLVMAGLLLGAGTLGDRIGHRRMFLIGLVVFGVASLAA
                     AFAESAAQLIAARAFLAVGAAAMMPATLALIGLSFHEERERNIAIAIWGSVAIVGAAL
                     GPIIGGWLLQHFWWGSVFLINVPVVLVAFVATLLLAPEGQRDTSRPWDLVSSVLALAA
                     LSGLVLAIKSLIATPPSYALGAGALLLAVISGAAFARRQQQLPYPLLDFAIFRNPAFL
                     AGTLSAVFTLFAMAGLQLVTTQRFQLVAGFTPLQAGLLVSVAALGSLPSALLGGSILH
                     RVGLRPLICGGLAAGAVGVGVVAFGFPHGLGWVVAGMAITGFGMGSAISVASTAILNN
                     VPAHRAGMASSVEEVSYEFGGLLAVAMLGSLSAAMYSAFLPASADMPALAREGFTQAL
                     HVARESGQGEWFTLATAAYDRGYQIVLLVITVMLAVGATIIARLLRGRVGSREGAADR
                     VK"
     gene            5078..5635
                     /locus_tag="QEL58_000342"
     CDS             5078..5635
                     /locus_tag="QEL58_000342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR family transcriptional regulator"
                     /protein_id="HDS1674865.1"
                     /translation="MRTSKRDRILDAAVNVINRDGVRAVTFESVAAEAQLTRGGLLYH
                     FPSREALLRGIDEHLVQAWEASMEALLGKRADEATALERYQTFVRVSAQSATRAELMF
                     MLESADPDADERPWGPAVRRWAPLPPSPGQDDPAALDNFVARLAADGLWIYEAMYEGQ
                     LDESVRAQVAERIAGLLAKSGGAAG"
     gene            complement(5723..6601)
                     /locus_tag="QEL58_000343"
     CDS             complement(5723..6601)
                     /locus_tag="QEL58_000343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HDS1674866.1"
                     /translation="MNASATQTDTSAPDRLSSLLERFRVQAALFHSGPLCGRHVFAPQ
                     PGRAFLHILRQGEMEVRHPDGDTALPRLKIDSPSLLLYPQPLHHVFHNAPLEGPDFTC
                     ATLDFDGGARNPIVQSLPPVMVVPLAAISELDDTLHLLFAEADRQRCGSRLLTNRLFE
                     VALIQILRWVIDHPDAAGVSHGLMRGLSDARLARTLVAMHQAPQHEWTLPRMAATAGM
                     SRSAFAAVFKEVMQATPASYLLDWRLSLACAQLRAGVAVKQVAIEVGFADTASLSKAF
                     RKRLGASPRAWLAGLA"
     gene            6708..7244
                     /locus_tag="QEL58_000344"
     CDS             6708..7244
                     /locus_tag="QEL58_000344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HDS1674867.1"
                     /translation="MSRVPLIDASATTADRQALLGQVHAAFGATPAMFRAVANSPAAL
                     QSMWGAFGALGAGRLSPLLGEQIAVAIANRNACEYCLAAHTALGRKAGASGEQMAAAQ
                     IGQSSDPATAAALDFALKVVEQRAQIADGDVQALRAAGFDDELIVEILAHVALNLFTN
                     YVNVAFDVPVDFPKVALR"
     gene            complement(7284..8132)
                     /gene="fdhD"
                     /locus_tag="QEL58_000345"
     CDS             complement(7284..8132)
                     /gene="fdhD"
                     /locus_tag="QEL58_000345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase accessory
                     sulfurtransferase FdhD"
                     /protein_id="HDS1674868.1"
                     /translation="MPDSTPPHTPPAGTAQRPMQRWRSEGQQQQVDVVAEEVPVAMRY
                     NGAAFAVMMATPCDLEDFALGFSLSEGLITAPSQLVTIDVRPQLEGIELQMTVTDDAP
                     GADLDPANGRLLPGRGGCGLCGTRQLEDVLRPLPQIRGRRTYPHAALQRALATLSQHQ
                     PMNEVSGSTHAAAWADASGRIGWVREDVGRHNALDKLIGALHHNEHVIDGGLLVISSR
                     ASYEMVSKAVRAGASVLAAVSAPTALAIDLARSAGLCLVGFARENGFNVYTHPERLQA
                     DDDTAV"
     gene            8378..10663
                     /locus_tag="QEL58_000346"
     CDS             8378..10663
                     /locus_tag="QEL58_000346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FdhF/YdeP family oxidoreductase"
                     /protein_id="HDS1674869.1"
                     /translation="MSEQKPPRYKPYNQPAGGWGAAGATAKVLLQQSVIGKGSKALLA
                     MNQPGGFKCPSCAFPDADERRKLEFCENGAKALAWEATQFRAGRELFAQHTVTELMAQ
                     TDYWLEMQGRLTEPMRYDATTDHYVPCSWDEAFALIGRHLQALDSPHQAEFYTSGRTP
                     NEAAFLYSIFVREFGTNNFPDCSNMCHEPTSRGLPPAIGVGKGTIVLQDFEHAEAIFV
                     IGQNTGTNSPRMMSNLVEARKRGIPIVAVNPMPERALIRFAEPQDVVQMATLGSTEIS
                     SEFVHIRIGGDLALIKGMMRVMFEREAQGERVLDHDFLAEHTVGLDALRDDVMAQDWD
                     DLVRVSGISEAQIRRCAEIYIRSNATVICYGMGLTQHQYGSRLLQQVANLLMLRGNFG
                     KPGAGIGPIRGHSNVQGDRTVGIDEKPKPAYLDRVQQVFGFDPPREHGHHVVESIEAM
                     LDGSAKVFIGLGGNFIHAVPDTPRAYEAMRGLELTVGIATKLNRGHLVHGRDALILPV
                     VARSERIVTPAGEQFVTIEDAMSNVTASRGVLEPVSAEVLPEVEIVCRMAMATLPDSK
                     VDWAACMHDYTPIRDLIAAVYPEIYTGFNQHIQQPHGFHLDIPPRRRVWPTPNGKANI
                     LLMPGLDVDEPVDDPEMLRLATVRSHDQYNTTIYSYNDRYRGVYNDRMVLFMNVEDRL
                     ARGLQKEAQVSLETISRDGVSRRIDGLTVLDYPMPRGALAGYYPELNPLLPLDYYDRI
                     SGTPAAKSIPVRVRAMAASTT"
     gene            10689..11024
                     /locus_tag="QEL58_000347"
     CDS             10689..11024
                     /locus_tag="QEL58_000347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008267757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674870.1"
                     /translation="MNLPGLLLRWMLLVALVLNAPALALASLPDASVPTAGHCVAPHS
                     TAMDGCCDEATSTLCASGECECPPACLGMLATLNGTPASPWREAPPPASARQHAPPPL
                     PDPLRPPIG"
     gene            11140..11679
                     /locus_tag="QEL58_000348"
     CDS             11140..11679
                     /locus_tag="QEL58_000348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF411 domain-containing protein"
                     /protein_id="HDS1674871.1"
                     /translation="MNRSLSLGLLLGTVLATAACARAAEDATAASSAGQAPAAPIKAS
                     PASIDPALPIAVVHKTASCGCCGIWVDHLKAEGFQVEVRDTDDMNPIKVRLGVPVGKG
                     SCHTAEIGGYVVEGHVPAEDIKRLLAERPAARGLVLPGMPAGSPGMEMPDGYVQPYTV
                     ELVRTDGSIEAFAEHGQDG"
     gene            complement(11777..12649)
                     /gene="blaL1"
                     /locus_tag="QEL58_000349"
     CDS             complement(11777..12649)
                     /gene="blaL1"
                     /locus_tag="QEL58_000349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_032966056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L1 family subclass B3 metallo-beta-lactamase"
                     /protein_id="HDS1674872.1"
                     /translation="MRSSLLALTLAAALPVAHAVAAETPLPQLRAYTVDASWLQPMAP
                     LQIADHTWQIGTESLTALLVQTSEGAVLLDGGMPQMAGHLLDNLKERGVAPQDLRLIL
                     LSHAHADHAGPVAELKRRTGARVVANAESAVLLARGGSDDLHFGDDITYPPASTDRIV
                     MDGEVVTVGGIAFTAHFMPGHTPGSTAWTWTDTRDGKPVRIAYADSLSAPGYQLRGNV
                     RYPRLIEDYTRSFATVRGLPCDLLLTPHPGASHWDYAAGSKAGAKALTCKAYADEAEE
                     KFDAQLAKETVLAR"
     gene            complement(12766..14151)
                     /locus_tag="QEL58_000350"
     CDS             complement(12766..14151)
                     /locus_tag="QEL58_000350"
                     /inference="COORDINATES: protein motif:HMM:NF019313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674873.1"
                     /translation="MLARLIASSTDAPLVISLQSPWGSGKTVFLKRLALHMKGAKGIP
                     TVRIDAWKTDDCADPLVAIIAELSLHLEELRRKDESLSEKVDSCLSRLAKFGSKILLP
                     ATSIVADLHTPGSGDVLRSAGAFAERLLDMQKNRSTAEKDFRDALTEARCLVTGRGHD
                     RSPSPMLLMIDELDRCRPDHAIRMLERIKHYFDVPGISFLIASDRGNLPAAVRSVYGI
                     HVDGELYLRKFFDYEFHLRQPNPEIYSSHLVATCINPESKHVLPSEIQLPNGRDFEHA
                     VLAIQSDELGVRVLKGEYMDAFPQFAKTFSLTLRDQEQAVTMITAFIHTRESAMETIP
                     LVDCFLACLRFGHPASFKALVDGSRKILLMEAKDRDDVSQAMIQRLRLLPHWDALQLL
                     AGSAAVPDISSIDDEIDPPTLSERILENYRGPSRSRAKRLPLLFLAARLYGRQFDLFQ
                     YSTSFLRLGVN"
     gene            complement(14333..16756)
                     /locus_tag="QEL58_000351"
     CDS             complement(14333..16756)
                     /locus_tag="QEL58_000351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDS1674874.1"
                     /translation="MTRPVSPAALRRLAPSLLAACLCAALPAAAQAAAPAPMELHLPA
                     GPLQASLNTLARQSGIQLLFAADSVSGRTAPALDGRYTPRDALQRLLAGQGLALQERS
                     PGVFVVSAAAAPAPAKANAPARAPAAATPTSLARVTVSASTARMPQGETAMPNTITVL
                     TREDIAQQLALGSDVSRVLSSQIPAFAPAREKMSNYGETMRGRGILYMVDGVPQSTPL
                     RDGSRDSHTIDPAMIERIEVIHGANALQGIGGTGGIVNIITRSAPSEPGAFLLDTNIN
                     YSSALPSRRDDSGQRGSALVGVRGEQFDLVAGLAYERQGLFHDGEGRSIGTNAQGELM
                     DSTSSNVFAKLGWTIAEGHRLQLMANRYELRGLDNYLAVNGDYRTGRPTISVRGDTPL
                     EPPMNRSRSLTLDYSAADLLGGRFQAQAFAVDFEGRYGASQWDPWGNTGANAAWDQTQ
                     NESDKRGFKLTQSWTRIADTTLDVTLGLDGLRDRTHQVLLASGMNWVPQTTYQSLSPL
                     LQLHWWPTDHLMLSGGLRYEKGELEVGDYTTLPRYGARKVTGGKPTMSETLPNFGAVW
                     YINDRLNAYASYSEGYTVADVGRVLRAINRDGQRVDSLIDLSPVVSDNREIGLEYDDG
                     RFSGDVAYYTSESKLGSVLVYDPGIDAYAVQRQATRVEGFETNLRLRLGDSRLGLGYA
                     RANGRYDANLDGRLDSDLAGVNIAPNRLTAFWEQNWTPQLSTRLQASRAFDRDFDLQG
                     ARVAEFKGYTTVDLVARYALDKHSFTLGVQNLANRQYISYYSQTTPSNPSYFSGRGRV
                     LTLGWQYRY"
     gene            complement(16838..17689)
                     /locus_tag="QEL58_000352"
     CDS             complement(16838..17689)
                     /locus_tag="QEL58_000352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FecR domain-containing protein"
                     /protein_id="HDS1674875.1"
                     /translation="MRRTPGPPTLPQPSQAATTDELLDQHRDALKERFPLPDPKALQR
                     RRGGRAAKVVLPALALMAGALLLVDPAWQVQDHRTAAGERRALDLADGSHLLLDAGTH
                     LQVRRHLRSRQVVLIQGRARFQVQHSAWRRFEVDAGPVRVRNYGTVFDVDRQGDLSEV
                     TLWRGEVGVRAEGSDAEQRLKPGQRLLAQPGSISPPEAIDTDPADWTTGRLQFDRLPL
                     VEVLRILQRYHDRPIVLDDPTLGPLQVSGVFDADRADTAVALLPEILPVQVHAAADGS
                     LHLRRRD"
     gene            complement(17686..18210)
                     /locus_tag="QEL58_000353"
     CDS             complement(17686..18210)
                     /locus_tag="QEL58_000353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005413582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HDS1674876.1"
                     /translation="MSQLPSPHPPALPLVSSLARHYEELVDYLRRRFRSPGLAREVVH
                     DVCVRLLERPPLHDARQPIALLRRIAHDAAVDRCRAEDLRRHWVEARAELPDDACPRP
                     GPEQQAQGLQALQQLSATIERMPCRRQQVFILHKIHALPQAEVALRMGIGLKAVERHL
                     RLAMADCRRQAMQQ"
     gene            18413..18679
                     /locus_tag="QEL58_000354"
     CDS             18413..18679
                     /locus_tag="QEL58_000354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674877.1"
                     /translation="MHVLLVITAGVLLLGVFLLFGRLWSVGSSQLPAALIAFIATWLL
                     VSVVNMWIGVSKAGYAVREELPILLLVFAVPALLAGLLYWRLAR"
     gene            18689..19867
                     /locus_tag="QEL58_000355"
     CDS             18689..19867
                     /locus_tag="QEL58_000355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008264812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low temperature requirement protein A"
                     /protein_id="HDS1674878.1"
                     /translation="MSTRLRLPALRHRDGHHARVTYEELFFDLVYVFAVTQLSHHLLH
                     HLDLAGVLQTLVLWFAVWLGWQYACWVSNWFDPQAPRIRGLLFATMLLALLMSSSIPE
                     AFADRAWMFAGAYATMQVGRTAFVLFEVGRNHPLAPNFRRMLAWVSVSACFWLAGAAA
                     DGSLRLALWAVAVACEYISPMFGFAFPGMGRSHTRDWTIEGGHLAERCQLFVIVALGE
                     TLLATGGVLSEVEHWSGEVVSAVLATFAGTIAMWWLYFGISSRDATEAITHAEDPGRM
                     GANFHYVHALLIAGIIATAVGNDLVMDHPGAAVSTVYATVMVAGPLIYLLGSALYKRV
                     VYGHTPRSHLLGAAALLVLGLLLPWLHLLAAGWLTSLVLLGVGLLDTRMKRRTRQVEG
                     "
     gene            complement(19864..21291)
                     /locus_tag="QEL58_000356"
     CDS             complement(19864..21291)
                     /locus_tag="QEL58_000356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008267298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674879.1"
                     /translation="MRDLNDAIADVETDIGQVQAQLATRGDQCLELIKEQEALHGRVR
                     EDFNALARLQAEAAIDSPPMVARDLLQQSSADLQRRDRKAAVLADELQALLDIEQSLQ
                     QRSQEAVAARDAAGGQWQALQNRVDTTLEAEPTYRVLQDDLQLAEARADTVERMAASA
                     QSEHDAKAGAYQADPIFMYLHHRRFGSAAYRGWPLVRTVDGWLAELCGFDRARREYAT
                     LVELPPYLQEHAGRARADVEAARQPVQQARDAALAEAGGDPLRQQLQTAQNAVAQALL
                     AEQLHRQTVDAKQAQIDGFRSWTDAEGGALLTALARTLSAKSMDDLYRRVAATASGED
                     DAVLERIHRSRLRLGEIDGMVGEHTREMAVLKKRLDSLQAARRSYQAAADIERQAYEA
                     PSYRAAAPATVAASFFSTTSSRSTTRSSGSLFDLLAGGSSSSSSRSSSSSSSSSSSSS
                     SSSGSSFQSGGGISGGGGFKTGGGF"
     gene            complement(21308..22795)
                     /locus_tag="QEL58_000357"
     CDS             complement(21308..22795)
                     /locus_tag="QEL58_000357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674880.1"
                     /translation="MAPAELQDALLTMDVVDQLRYRNAEMKALADSGHDQARLKQRLL
                     ELYRSQGIEVSDEIVEAGIQAQREQRYLYAAPRGWKAWLARRWIDRRRLLKWALMAAL
                     VLLVLGALLMMARSFGAFVHESNVQKNVQVLNDKVAAQQREAAAARALLARQEQSLQG
                     LLPRANASAERLQPLTERAQSALAEAQRRFAGVPTAMADLPTLIRKDKLTRISSGGSA
                     TGEQAAAQVEQQRQAAAALLARARETLPALTERVTTLGQAIDASELLDTTNAAAKAAR
                     LTPDAEKVRARAYTAGDVALRAGDMAAATLAVTTLKELIGSADKLAALNERLAQLKAD
                     GLATGVAGEDRKRLERALDQAAQRVRVETLAEAGPAIDEVGQLVALLSKSLIYRIVNR
                     DGERTGVWRYSEKANGSRNYYLVTEALDEAGNASELLIRNEETGKDEWASLFAVRVPE
                     ATYNRVAADKQDNGIIEDDQIGSKPRGSLSPRFRMPTTGGYITEW"
     gene            complement(22809..24005)
                     /locus_tag="QEL58_000358"
     CDS             complement(22809..24005)
                     /locus_tag="QEL58_000358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell surface protein"
                     /protein_id="HDS1674881.1"
                     /translation="MPENTLLATPAATAPTTYLDRAMATLRSLGLAAPQDNNAPAIAL
                     VSQLSTLDQGRVVAIARVLQQSGHFNAVMRDEISSAKVSDRYTEIVRAFDSIRDDAST
                     MVEQVRDGKIDMGERLQNLWMKVTRGDIPSRFEKIRRTFLEVSRDSAEQLQRESRVLE
                     MYGDFRLSIKDAEIQAHELLKLQQQRLAEARETLKQAQQRVESADPAADAADTGRLVM
                     ARDEALRNSQAEESRYQLAKDLAENLQVNYATSEAIMLRVHQSHEVKRRVNERSVVFF
                     STNETSFTALNLAFTTQMGLHESTQALNAMTEGTSKGLEAVANIGDEVLHEGLKAGYG
                     ATIGVDSVRKLVDAVVRFQETSLQEIEQLRSQATRDSAEIAEYVEQGKQRFAALLQAP
                     PSPEPR"
     gene            24310..24744
                     /locus_tag="QEL58_000359"
     CDS             24310..24744
                     /locus_tag="QEL58_000359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012480385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HDS1674882.1"
                     /translation="MQNLPQWLIWAGLSAVFAALTALFAKVGVKGVDSDMAMAIRTLI
                     VAAVILPLVVVTGKWSNPLLLPGRTQLFLVLSALATGASWLFYFRALQSGELAKVAVV
                     DKFSVVLVIVLAYLLLGERPSLREWSGIGLVAAGVIVLATRK"
     gene            complement(24796..25437)
                     /locus_tag="QEL58_000360"
     CDS             complement(24796..25437)
                     /locus_tag="QEL58_000360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005416702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDS1674883.1"
                     /translation="MRKPTAPAADPAPIVYVIDDDPSVRAALEDLLASMGLQVRAFAS
                     TQAFLDHELEDAPACLVLDVRMPGQSGLEFHRSMGTHGLQLPVVFITGHGDIAMGVNA
                     IKDGAIEFLTKPFRDQELLDAIHKGIEIDRQRRRDGEALDSLQQRWNTLNAGEREVVD
                     GVVRGRLNKQIAGDLGVSEITVKVRRAQVMRKMGARTLVDLVRMYDRLQAGTP"
     gene            complement(25430..26485)
                     /locus_tag="QEL58_000361"
     CDS             complement(25430..26485)
                     /locus_tag="QEL58_000361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component sensor histidine kinase"
                     /protein_id="HDS1674884.1"
                     /translation="MPSLSPRRPLVLLALIVVMAAIFLIDTVTDYAVAAACFYAAVIL
                     AASRVLAARGLITLALACIALTALSFFLTRFGTYRIGLVNSVIGMLVIGITTYLALNM
                     EAAKAAVQEAQGRLLRVARASTVGELTTSIAHEVNQPLAAIASSAEACQRWLAQDPPN
                     VDKARQTVARILADAHRAGDVIARIRGLTQGAAPQRRAFDLNQAVEEMLALSRSELDR
                     HGVAVALLLDADLPPVQADRVQVQQVIGNLILNAVDAMEAVPAADRRLSLLTQRDGAR
                     ISLSVRDRGVGLPADHPERVFDAFWTTKSHGLGLGLSLSRSMIEANDGQIRAERPSGG
                     GACFVFDLPIATDVPHA"
     gene            complement(26717..27457)
                     /locus_tag="QEL58_000362"
     CDS             complement(26717..27457)
                     /locus_tag="QEL58_000362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012511185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MgtC/SapB family protein"
                     /protein_id="HDS1674885.1"
                     /translation="MLDINPNLPAFNAGATLSSLISLTVAFVLGTIIGLERQLRQRTA
                     GLRTNTLVAVGAAVFVDLAVRFHDLYGGPPSPLHVVAYVISGVGFLGAGAIMKDGAQV
                     SGLNTAATLWGSAAVGACAGIKLLPEAVMAAIFVLAANTLLRPVVNRIQRQPLPEAFS
                     EATYAINVVCQREQQADVLDQLLLLLEQAQYPVRAVDQRPFGERDVEIEAVLYATTVD
                     AGELDAVLATLATTPGVLQGFWNASLEE"
     gene            complement(27488..30247)
                     /gene="mgtA"
                     /locus_tag="QEL58_000363"
     CDS             complement(27488..30247)
                     /gene="mgtA"
                     /locus_tag="QEL58_000363"
                     /EC_number="7.2.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium-translocating P-type ATPase"
                     /protein_id="HDS1674886.1"
                     /translation="MSLLNAWFNAFLRSRRAGNLFRRRAMPEAGFGPGSAEAAPFALT
                     TGLVTLAQQPEAELLATLDSHADGLSPHEAGERLATLGPNEVDHEKPLPWWRHLWQCY
                     RNPFNLLLTVLAAVSWLTEDLKATIVIGAMVLLSTLIRFVQEGRSNRAAERLKALVGN
                     TARVLRRNPGTEAADVADQYFGAHLHSRRPARLLDLPIRELVPGDHIVLSAGDMIPAD
                     CRVLTAKDLFVAQAAMTGESLPVEKFAHPGDGLAGLLEQHNLLFMGTNVVSGTATAIV
                     LATGNRTYFGTLAQRSTATDRAPTAFQAGVNSVSWLLIRFALVMVPFVLLINGWTKGD
                     WTEAFLFALSVAVGLTPEMLPMIVTSTLAKGAVLLSRRKVIVKRLDAIQNFGAMEVLC
                     TDKTGTLTQDKIALERHTDVFGHDSEDVLAFAYLNSHFQTGLINLLDRAVLEHVELQS
                     SLRLSQDYHKVDEIPFDFERRRMSVVVSEREDHHELICKGAVEEMLAVCSTVRENGQD
                     MPLDDARLARVRQTTEELNEQGLRVVAVAMKETAASRTAYSQADECDLTLVGYVAFLD
                     PPKESAAQALQALAAHGVEVKVFTGDNELVTARVCAQVGLDADTILTGPQIERMDDGA
                     LSRALHHHRVFARLTPLHKERLVRELRAQGKVVGFLGDGINDAPALRAADIGISVDSA
                     VDIAKEAADIILLEKNLMVLEEGVIQGRRTFNNMLKYIRMTASSNFGNVFSVLVASAF
                     LPFLPMLPLQLLVQNLLYDISQIAIPFDNVDEELVRKPLKWNPGDIGRFMVFFGPISS
                     IFDLTCFALMWYVFDARTPADQGLFQSGWFVVGLLTQTLIVHMIRTPKVPFLQSIAAP
                     PLLLMTGLIMAIGVALPMSPLAGYFKLQALPAGYWPFLVAILFGYAVLTTALKKFYIR
                     RYGWQ"
     gene            complement(30311..30610)
                     /locus_tag="QEL58_000364"
     CDS             complement(30311..30610)
                     /locus_tag="QEL58_000364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005413574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674887.1"
                     /translation="MSYKILYITLRRLIGERDVAALRSQLLQHGPVMFARSLSLGSPR
                     VVADALSLLPISERINVLCHLPYPLRDAMKPLCIGGSQRLHMQPWSPAVLAMRHA"
     gene            complement(30932..31237)
                     /locus_tag="QEL58_000365"
     CDS             complement(30932..31237)
                     /locus_tag="QEL58_000365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019337231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674888.1"
                     /translation="MTGFRFVPAALVIATALLLGACSKPQEASKATAAEDVTEVKLLP
                     AYESLDKDKDGIVTLAEVDAVAPDWAERLHTCDTDRDQKLSRGEYDVCKQTAPAAAH"
     gene            31513..32664
                     /locus_tag="QEL58_000366"
     CDS             31513..32664
                     /locus_tag="QEL58_000366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008267444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HDS1674889.1"
                     /translation="MRRRHLALGALLLVVLSLVMLFHGVSRGDAQPASTPPPVPVVTG
                     RVEQRDVAHWRSGVGTVQSLQSAVLRPQVDGVLTEVLFEEGQKVRKGQLLARIDDRAI
                     RADLGGAQAAVVRDRATLDAARSDLARLQHLSSDQLVSRQMLEQQAATVQQLQATGHG
                     NQAAVDAAQVQLSYTRILAPMDGRIGLRQVDPGNLVRATDTQGLVTVQQTDPISVVFA
                     LPQDALPQLRQALASGEVAVQALDRDGGLLLAEGRLQVIDNQVEETSGTVRLRARFAN
                     ADDRLWPGQLVSVRVRTGQSTGALVVPAAAIQRGVDGSFVYRVLGDGSVEILPVSVGE
                     AENGQVAVQGELRVGDVIVRDGQSRLRPGVIVAEAAAPAVPAAKGGAAP"
     gene            32661..35774
                     /locus_tag="QEL58_000367"
     CDS             32661..35774
                     /locus_tag="QEL58_000367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit"
                     /protein_id="HDS1674890.1"
                     /translation="MSARVSLSSWFVRHPVATTLLTLAVVLLGVAALPRLPVAPLPEA
                     EFPTIRVNASLPGASADTMASAVATPLETQLTGVPGIIEMTSTSALGSTSITLQFDLE
                     KNIDTAAQEVQAAINAAAGRLPSDLPNLPTWRKVNPADSPILVLSVVSAQMSMTELSD
                     LAESRLARSISQISGVSEVNIVGQQRPAIRIQAQPERLAAMGMTLSDLRGVAQNASLN
                     QAKGALMGEQRTSTFEANDQLFDAQDYRQLVVAYRAGSPVTLGDVAQVVDGAENAYVQ
                     AWPNGQPGVGLIISRQPGANIVRTTDAVLAALPELRANLPASVDVDVLNDRTRTIRAS
                     LHEVEVTLVLTIVLVVLVMGLFLRQLSATLIVGAVLVVALVATFAAMYVAGFSLNNLT
                     LVALVVAVGFVVDDAIVVVENIHRHREAGLGPIEAALKGAEEIGFTVVSISLSLIAAF
                     IPLLFMGGVVGRLFAEFALTITVAILISIVASLTLAPMMAAHLMKRMPAHRDSQDTLA
                     GRLLAGYDRSLQWALGHPRLILLGFGATVAVAVASYVMIPKGFFPLQDTAFVIATTEA
                     AQDIGFEDMAAKHQQLAKIAAEDPALLAYNHAVGATGGSQTLSNGRFWFILKDRGDRD
                     VDVHAFIDRLRAKMASVPGITVYMRAAQDINLGAGPSRTQYQYALRGQDSRELSRWAE
                     QLTTRLRGLPQLRDVSNDQQVGASVTRLQIDRTAAARFGLTANDIDQVLYDAFGQRQI
                     NEFQTDTNQYRVILEIAPGLLGQVDALSYFHLRSPLTGQMVPLSAVAQVQPPGNGPLS
                     ISHNGMLPAVNLSFNLAPGVSLGEAVTLVEQAQAQIGMPASISGRFQGTAQAFQESLA
                     SQPMLILAALLAVYIILGVLYESFVHPLTILSTLPSAGIGAVLMLWLWGLDFSIMALI
                     GIVLLIGIVKKNGILMVDFALDAQRNRGLTPLQAIHEACLTRFRPIMMTTLAALLGAI
                     PLMIGFGTGSELRQPLGVAVVGGLLISQVLTLYSTPVIYLALDRLFLQRRRERRAAAG
                     AALTEPG"
     gene            35771..36460
                     /locus_tag="QEL58_000368"
     CDS             35771..36460
                     /locus_tag="QEL58_000368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008267773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal response regulator transcription
                     factor"
                     /protein_id="HDS1674891.1"
                     /translation="MKLLIVEDESKTAHYLRTGLGEQGWAVDLAADGVTGLHLAREFD
                     YDVIVLDVMLPGMDGFNVLRELRRSKQTPVIMLTARDRVDDRVHGLGQGADDYLVKPF
                     SFIELLARLQALVRRGRQQEPTELQVGDLQVNLLARRAYRDGARLDLTGKEFALLALL
                     AQRRGQILSKTVIAAQVWDINFDSNTNVVEVAIKRLRSKLDGPYPSKLLHTVRGMGYV
                     LEVRDDEDDGR"
     gene            36457..37818
                     /locus_tag="QEL58_000369"
     CDS             36457..37818
                     /locus_tag="QEL58_000369"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal sensor histidine kinase"
                     /protein_id="HDS1674892.1"
                     /translation="MRMSIAQRLSAMFALAALLVFTLLGIGVYGVLERQVVRYQHAEL
                     QTKLHAVSGSVAMCDTRERWSKVRDKVGNLISGDRDTLVWAWSDDPTFRIGAERPSVR
                     PPAKGDAGMGTLQRAGGHPLRTLYEHVPGKGVRPAVDLWIGIDSEPYTHALQRFAWAL
                     WIAGALGVLLVAGLGYWIARLGLAPLRALSDEARSLSPQRLSQRLAADGLPAELGHLT
                     GAFNGALDRLEAAYTRLDGFNADVAHELRTPLANLMGQTQVALSRPRDNAELQEVMQS
                     NLEELERLRAIVNDMLFLSRAGQGDIAMETREVALAEEVAAAGDFLELLFEDAGLTLH
                     IEGDATARIDPSLFRRALTNLLHNAVQHARPGSEVRVQLQAEGEGARIAVMNEGAGIA
                     AEHLPLLFERFYRVDQAREYRGERHHGLGLSIVKAIANLHGGDVFVASHEGLTTVGFT
                     VVC"
     gene            complement(37828..38787)
                     /gene="pip"
                     /locus_tag="QEL58_000370"
     CDS             complement(37828..38787)
                     /gene="pip"
                     /locus_tag="QEL58_000370"
                     /EC_number="3.4.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008267082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl aminopeptidase"
                     /protein_id="HDS1674893.1"
                     /translation="MRTLYPAIEPYREFTLTVSDLHTLHIEECGTPEGIPVVYLHGGP
                     GAGISPTHRRFFDPARYRIVLIDQRGSGRSTPFGELRDNTTQALVADIEKVREHLGIE
                     RWLVYGGSWGSTLSLAYAQAHPARATGLIVRGVFLGREIENRWFAEASGGARWIFPER
                     WDRYEAYIPEGERADMIAAYWTRLDSADEATRIEAAQAWLGWEDNAATLQHDVDAVST
                     DDPLDTLAKARIEAHYFRNGIFLEANQLLRDIDRIRHLPGVIVQGRYDIICPPRSAWD
                     LAKAWPEARLEMVTSGHSANEPATVDALVRATDAFADQYGQRS"
     gene            38921..42331
                     /locus_tag="QEL58_000371"
     CDS             38921..42331
                     /locus_tag="QEL58_000371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005416691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HDS1674894.1"
                     /translation="MAGSDVVHGPARQAVAARLDDLGQLRRRLLYGGGALISALVVLT
                     ALVSAIADVEEFHARERHSFNEARAAAEYYLLQRDRAYATSINGNDVLWRDQRAGLAA
                     SGAGLAARFHAQGEEVLVRSEGRTAVPWLVLGLKDKPLPEQELAAYLGMVDIYSAYTA
                     DSITSQNASGPLLVYAYEPQGRLLAVSNISGESQLLRALGVTTRQQAFARLLGEEPRF
                     RQATVRPGPIREAAREGRLMSRYGINPFTGQPSLIGMVTLAEGTTPYFRRVVFESVGN
                     IKAQLEAREQGRYLVSTAERQVVLSTGGLSNREQDLLMRLAPSDTARAGRQPPRRYSQ
                     GSFVLASGLPGVEWTLSHVYGWSDIWRSQGAYLLARALSALLIISLLWWLLRRIDRRV
                     FTPALADASRVYESEALSRVIIGTAPVGLVLLARDSGEPLLQNDAARQLVETVRTAGE
                     VASPPLYLRLAEVGRNARIDEVLELQWSPAESGTATQLQISMAQATYDEQPVWVCALR
                     DVTAQVELEDNLRRARENSEAARQSAESANRAKSAFVATMSHEIRTPLNGVLGHLELL
                     ARSPLQPSQRERLDRIRFSADALMHIITDVLDFSKIEAGQLDVERVPFALRPLIEGVA
                     LLFAPDALRKGVQLCLTVEAANNQLYVGDAHRIRQILNNLVGNAVKFTDSGRILLRAE
                     LHHSAGQGTQLRVQVIDSGIGMSPEQTAQLFQPFQQADASVSRRYGGSGLGLALCQQI
                     ARAMGGQVSVESTEGVGSSFTLRLPMQVQALQPPPPQPLRGRRVTVLSSTPEWRAEME
                     RLLVAWGATAAVLDRPQNDDEGGDALLIVGDHRAWSIDEEQQLMQGYARTVHAHAQGP
                     LSAETRGDRIEVSSYVSEAVLEALAPGERAGGHVAVVKPVRATAARGRVLLVEDNAVN
                     RELIQQQLEEIGFAVDAAGNGAEALELWKDGHYRAVLTDINMPVMDGYALARDLRQRG
                     QSLPILAITATALASERERCLAAGIDDLLLKPFNLDRLEVALARTNAPADHVRGQQRE
                     AGPAAVPVPRDIPAGIRRIFVDTGDQDLQAILDARANGDTAALLERVHGFKGALQMMG
                     EQALAEQCGEIESALRQGASASDEALDVLQLALSARLEDYRRDLDASL"
     gene            complement(42437..44635)
                     /locus_tag="QEL58_000372"
     CDS             complement(42437..44635)
                     /locus_tag="QEL58_000372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019337235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent siderophore receptor"
                     /protein_id="HDS1674895.1"
                     /translation="MTVQFVRSSILRPAGGGSRVSMHLPGTARRYRVSALALGLLASF
                     AALADSAPSTLPSVQVQEQRRVTGDYAGGQVASGNRVGLLGDKDFMDTPFSTVSYTEA
                     FIRDRQARDLTDVIAATDPTVFSNGVTGSWSENYSIRGFASSTSDTTFNGLSGMAPYY
                     RTSPEMFERIEVLKGPSALLNGMPPGGSVGGSVNLVPKRAGEQPLLRVSANFASDAQF
                     GTHVDLGRRLGADKQFGIRFNGAYRDGDGAVGKQSKKVQLGALALDWRGERARVSADL
                     YSADDRVDGPARGVGLAPGVAIPRPPRGDTLINPDWAYVDSQDKGAMLRGELDINDNL
                     MAYLAYGTSKTDYRYNGSISAQVLNPAGDFTTVIGQLAFDIKKQSGDAGLRGRFHTGS
                     VGHQWAANVTHYQHTQNDYGRRSVPGWDWTTNLYNPVWGPAAPFVAPHISHTELKLDS
                     IGFADTLSFADDRVQLTMGVRRQQVLSETFSVATGARTSRYDESATTPAFALLVKATD
                     KVSLYTNYIEGLSQGATAPMTAANAGDVFAPFRTKQKELGLKLDLGRFAHTFAVYEIK
                     RPSSYTDPVTNIFSFGGEQRNRGVEWGFFGAPLDGLRLMGGVAYVQPMLTRTAGGVNE
                     GRIATAVAQRQAKLGVEWDVPALEGLTLTGNATAMSKQYISADNRLSVPGRTLFDVGA
                     RYSTTMAGRPLALRASVNNVTNKAYWGMPLLSSLALGAPRTVLVSATMDF"
     gene            44876..45460
                     /locus_tag="QEL58_000373"
     CDS             44876..45460
                     /locus_tag="QEL58_000373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014647283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HDS1674896.1"
                     /translation="MNMHTEIPAPARGRPPTITPDRLADIGIKLGLPNLTMANVAAEL
                     AVSQAALYKRVANLEALKRLVADTVFQRWQIPRASADAPGGLEAYLMGFVASLCEVVK
                     AHPGLPPYLLRRAVATAPMLDKIASHQAHVAEVFGLPLDKARWLLATIAFYCIAGADT
                     IYAIADDEEGQVITEFRQGMRALVIGSLEVLQLR"
     gene            45538..46626
                     /locus_tag="QEL58_000374"
     CDS             45538..46626
                     /locus_tag="QEL58_000374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012480375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcaQ family DNA glycosylase"
                     /protein_id="HDS1674897.1"
                     /translation="MPATPTLDDLRRYAVARTLFKPTTLLSAIRRLGFVQADPIRAPA
                     RAQDLTLRHRVKDYRAGDLERRYARLPVEEDCLVNYGFLPREHLALMHPRVSRRAWDA
                     ETQRRAADVLAFVRERGSVHPREVDQAFAHGRVTNYWGGTSNASTHLLDGMHYRGLLR
                     VQRRDSGTRIYAVADHTEADASEQAQIERAAALIDLVVRKYAPLPSASLTYLVRLLGY
                     GAPHLAEQTRKALALARQQLASCTLEGTTWYWPADENPRSRRHAPDEQVRLLAPFDPV
                     VWDRRRFELLWQWVYKFEAYTPAPKRQYGYYALPVLWHDQVVGWANLSVRDGELASSV
                     GYAGRSLARDKVFRGALDDELQRMAAFL"
     gene            complement(46695..46973)
                     /locus_tag="QEL58_000375"
     CDS             complement(46695..46973)
                     /locus_tag="QEL58_000375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012511175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3325 domain-containing protein"
                     /protein_id="HDS1674898.1"
                     /translation="MIHLILFVLSVAAFACLALSMERHQRDVVRRVLSAQATQQLRAM
                     GWALLVFSTVFAMRGLGVGSGLAALSGHTSVAAGVVVLAMVAHARRYR"
     gene            complement(46970..48580)
                     /locus_tag="QEL58_000376"
     CDS             complement(46970..48580)
                     /locus_tag="QEL58_000376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012511174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY domain-containing protein"
                     /protein_id="HDS1674899.1"
                     /translation="MSQVDRSPKPRGIRQTMSDLHIWVGLLAGWILYAMFLTGTASYF
                     RDELSRYTRPEIATPSTLPDAAAVAQRTVTAIMADTPAASQINLSLPSQRMPWVSAMW
                     ASPGGRGRHGFDSGLFDASTGAPLQARDTGGGDFFYAFHFNLHYMPAMWGRWIVGLCA
                     MFMLVAIVSGVITHKKIFADFFTFRWGKGQRSWLDGHAAVSVLGLPFHFMITWSGLVM
                     LAVLYMPWGLAKLPDKRQQAEVISEMRLFLPPQKAAGQPAPLTHVGALVQQAEQRWGT
                     GAAGSVQVQNPGDENARVAVVRAQSSRVSTTPNYLLFDGSDGQLLQIKEHSGVAADTQ
                     GVLYGLHLGRFADAALRWLYFIVSLAGTAMVGTGLVLWTVKRRAQLPDPQRPYFGFRL
                     VERLNIATVAGLSVAMAAYLWANRLLPVTMDSRAAWEVHLFFLAWAAMFVHATLRTPK
                     RAWIEQFLLAALLLALLPVLTAMTTSHPLWHALAMGDWAFAGTDLTLLALAALHSLLA
                     WRTWRHAPKAKRARPSAASRNAVPEAGA"
     gene            complement(48577..48876)
                     /locus_tag="QEL58_000377"
     CDS             complement(48577..48876)
                     /locus_tag="QEL58_000377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006369092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3649 domain-containing protein"
                     /protein_id="HDS1674900.1"
                     /translation="MSVSRTASVLAWLPLVSRILAALFGGYALAALCSIAALALPIDG
                     RQAVFTGMLASFLLYAGAVVWVFAVRSAWRAWLGLVIAALPLWLIAQTVGDGGGA"
     gene            complement(48929..51106)
                     /locus_tag="QEL58_000378"
     CDS             complement(48929..51106)
                     /locus_tag="QEL58_000378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent siderophore receptor"
                     /protein_id="HDS1674901.1"
                     /translation="MSLPLRTLPLPRRSALSVAARAALLPTLLIATAAHANDAPDGAR
                     QLPTVNVRADKAAPADAYAGGQVTRGSRVGLLGELDFMDTPFNTTRYTAEFIDNIQAP
                     DLVRVIALTDPSVYSSGSSGGITDYFNIRGFGVASSDIGFGGLYGLIPYYRVTPELAE
                     SIEVLKGPSALLNGMPPGGSVGGAVNLVPKRAGDTPLTRFTASYGSDTQWGGHLDVGR
                     RFGAGKQFGVRLNAVHRDGDTATDHQQHKTQLASLGLDWRGERSQVSLDLLSSRDHVD
                     GLNRGVSLSPGLAVPRPPEASTLFAPDWTFSTVKDQAAALRWSFDINHHLQAHASYGH
                     GHTDFDSIASATTLITNAAGDFRNNFAHQRFIYSKDTAEAGLSARFRTGAVDHALAIS
                     AAWYQHDQKFGFKRNLLARDWVTNIYNPQWGPAIDRSFSDASLPKTAEVRTTSVGIAD
                     TLSFIDDRVQLTLGIRHQTVLSDTFDGSTGKRTARYDASANTPAGALLFKANDRLSLY
                     ANYIEGLSQGSTAPATAANAGDVFPPYKTRQREVGAKVDFGRLASVLSVYEIEKPGAY
                     TDPATNVFSSGGQQRNRGVEWTVFGQATEQLRVLGGIGWLQPKLTRTQGGINQGRLAT
                     ATPQWQGKLGVEWDVPAVAGLTLTGNAVSLSKGYINADNSQWVAGRTVFDLGARYALQ
                     AAGHPLVLRASVQNLTNKAYWAGSLGSGLGTPRTALLSATVDF"
     gene            complement(51302..52138)
                     /locus_tag="QEL58_000379"
     CDS             complement(51302..52138)
                     /locus_tag="QEL58_000379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012511171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="siderophore-interacting protein"
                     /protein_id="HDS1674902.1"
                     /translation="MSASPTSITPAGPLRSADHDRGLQALQVQVVAVVQPCASLLRLL
                     VQLPEHAELAPWQRANTAVRIQLGAGFGDVSRIYTVRSVDAATRQFTLDVVLHEAPGP
                     MLAWVRALRPGDAFDLTGPRPHLQVPQREGTCALLFADQSAIPALFALLQQWPVGQRA
                     QAWVSSEDAFPVDELPHPDGVCVHRLATGDAPLLQHARQQQPQPGSTVWAAGEREEMR
                     ALRRHFIETVGLPRTDVAVAGYWKRGETTTETDRRRRRNYERVLARGGGLQDLDDLAD
                     DI"
     gene            52308..52922
                     /locus_tag="QEL58_000380"
     CDS             52308..52922
                     /locus_tag="QEL58_000380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012511170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HDS1674903.1"
                     /translation="MAAPKKTASRGRPPSITRERIADAGIAMTLPGLSFVGVAAALGV
                     SHIALYKHVANLAALRELVAEAIFERWQAPALDAAGQRSIVEDLRAFQRSLRALVDDN
                     PGLAPFLVSHGAKTPEMLARIQRHHAEFSRVHGLPLEQAAWLLSTVAYHAVALADTVY
                     SRHALVDATRRTLDRKAQQAEFDRSMEALIIGALAMCGRMAAPG"
     gene            complement(52943..53863)
                     /locus_tag="QEL58_000381"
     CDS             complement(52943..53863)
                     /locus_tag="QEL58_000381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008267985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674904.1"
                     /translation="MKHPHDPAAAAGSIGQQNAAATLKAILRTYPWQLTGTFSLVALE
                     NALLLAYPLFAGFAVDAIIRGDIGHAISYAGVVLLFWLVGAARRAVDTRTFTRIYADL
                     AVNVVQAQRRLGQATSTSAARVVLAREFVDFFEKHVPIIATALVSMFGAAAMLLAIEP
                     VVGAASLVALLGALLLLPSFARRNEQLHGRLNNRLEHEIRLVDRVSPSVLRRHYTTLS
                     RLRILLSDREAGAFVVVGAAAAVLFALTIGRLATTDGVTPGHVYAVMTYLWTFVGSLD
                     DAPSMVDQLARLKDIGRRVSPGMEDAEHDR"
     gene            complement(54043..55119)
                     /locus_tag="QEL58_000382"
     CDS             complement(54043..55119)
                     /locus_tag="QEL58_000382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010485503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing histidine kinase"
                     /protein_id="HDS1674905.1"
                     /translation="MNPKGKSIGRQITLSITVASLCSTVLSISGFYLFYYLMEVFYPR
                     WYDQPETIMPSGLEWLWIGLTASVVVIFATLVASRLTRRIITPLNSVAESLRRVASGD
                     LDARARGGGTTMAEAATLVSDFNSMAERLSRMSENRVFWNAAIAHELRTPMTILRGRL
                     QGIAEGVFEPGPEQFNSMLTQLEGLTRIIEDLRVVSLAESGHLDLRLQRSDVSVQVAA
                     VVEAMSEALTESGFSVTLEARPALADCDPARIRQAVLALLENARRHAIPCPLRVRVLL
                     AEGHCTVAVEDGGPGVPDELRDSIFEAFQRTDVSRSRQSGGSGLGLAVVRAIAVAHHG
                     TARCRATERGGSSFELRWPVHARR"
     gene            complement(55123..55839)
                     /locus_tag="QEL58_000383"
     CDS             complement(55123..55839)
                     /locus_tag="QEL58_000383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019337245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDS1674906.1"
                     /translation="MKHALRTRQPPLVLIAEDEGEIADILGAYLDRSGLRSARAADGE
                     AALAAHRQLRPDLVLLDVQMPRLDGWQVLSELRRRGNTPVIMLTALDQDVDKLTGLRV
                     GADDYVAKPFNPAEIVARIQAVLRRSARTVAEEPNGLIRQGPFEIDLRSHEVTVRSGD
                     QLHALTFTLTEFRLLVHMARAPRQVHARVDLLHACLPEGDTQERTVDSHVSKLRRKLE
                     EVGVIGIPATIRGVGYRFLD"
     gene            56095..57276
                     /locus_tag="QEL58_000384"
     CDS             56095..57276
                     /locus_tag="QEL58_000384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019337247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HDS1674907.1"
                     /translation="MSNRRTWISVAAVAALAAGAAAWVLAEGDEAALITAPARVADLE
                     KTVQAVGRVNPKELVAVGAQVSGQVKRLHVVLGQRVQAGDLIAEVDSQPQRIALRSAE
                     AATSTLRAQHTASQARYVQASRVFERQSQLVASRLVSQEGFETARVARDAARADVAAL
                     QAQIDQALTQVETARINLGYTRIVSPTDGYIVAIVTKAGQTLNSMQTTPTIVMLAQMD
                     TMTVRAEIAEADVELVAPGQPLWFSTLGPSGRRYESHLQQLEPAPSSIAEAATGAAGG
                     SAQTPKAVYYAGLFDVANPGLALKPSMTVKVTLQLARVANALQVPLTALTESDDTQGQ
                     RATVQVVDAKGRARERAVTTGLRTATAVQILTGLREGENVVVGQAPSGADAEPTSLLG
                     M"
     gene            57279..>58849
                     /locus_tag="QEL58_000385"
     CDS             57279..>58849
                     /locus_tag="QEL58_000385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010485510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDS1674908.1"
                     /translation="MADALLELRGVSRAYRSAAGEVVVLKDVSLRIDAGEFIAIIGPS
                     GSGKSTLMNILGCLDRPTEGSYRVNGEATEQMAPDALARLRREHFGFIFQRYNLMENL
                     SATENVALPAVYAGVDAATRTARARTLLETLGLGERTANRPSQLSGGQQQRVSIARSL
                     MNGGAIVLADEPTGALDHASGQQVMAELKRLHAQGHTVILVTHDAAIAANAARVIEIA
                     DGRVVADRGERRTQAADSAGASEHETASRAERRARVDAVREAARMAVRSMLAHRLRTL
                     LTMLGIIIGVAAVVTVVALGKGAQAQVESQINELGASTLEIYPGADFGDPRSAEIETL
                     VVGDADHLAALSYVDSVSPNLSGSVAALQGSRRANTQVLGVGADLPRVRGLRLKAGRF
                     FSAAEVDAHRAVGVVDQKAAKALFAGSPIGSTVLLGGMPVEVIGVVGASAFAGGATPT
                     VYVPYTSAASRLLGSQRLESITVRVRDNVPTNAAEASLAAELQRLHGRRDFFIYNADQ
                     IRKAVMKSSQTMAALV"
BASE COUNT         9289 a        19195 c        20516 g         9849 t
ORIGIN      
        1 tgcgctgatc ggccggccgg cggtgctgct ggccgatgaa ccgacctcgg cgctggaccg
       61 ggaggccgcc acggccttcc tgcagttgat gtccgcacaa tgccaggcgg ccggcaccac
      121 cgtggtggtg gtcagccatg atgatggcct gcagccgctg ttcgaccgca cgattgccct
      181 ggcggagatc aaccatgcag gtggcgccca tgcttgagct tgcctgggcc agcctgcgca
      241 gccgcgcgtt gagcgttggc ctcaccgtac tggtgatcac cctcagcgtg gtgctgttgc
      301 tgggcgttga acgcgtgcgc gcacaggcgc acgagggctt cgccagcacg gtgtcgggta
      361 ccgacctgat cgtcggtgcg cgttcggggc cggtgaacct gctgctgtat tcggtgttcc
      421 atatcggtga cccgaccaac aatgtgtcct ggcagtccta ccaggagctg tcggcgctgc
      481 cgcaggtgaa gtgggcggtg ccgttgtcac tgggtgactc ctggcgtggc taccgcgtgg
      541 tcggcaccag tggcggctac ttcgatcact accgttacgg cgccggtcac gcgctggcct
      601 tcgcgcaggg ccggccgttc gacgatctgt acgatgcggt gatcggggcc gaagtggccg
      661 ctgcgcagcg ggtcggcctc ggcgatgaga tcgtgctggc ccacggcacc ggcgcggtta
      721 cgctggccac ccatgccgac aagccgttcc gcgtggccgg catcctgcag cgcaccggca
      781 cgccggtgga ttcatctgtc ctcgtctcgc tgccggccat cgaggcgatc catgtggatt
      841 ggcgatcggg tgtgcagctg cgcagccaaa gcgtcagcgc cgagcaggcg cgtcacctgg
      901 atctgacccc gaccagcatc acggcgttca tgctcggcct gaactcgcgc atcgccacct
      961 tctcggtgca gcgcaggatc aacgagtacc cggaagaggc gatgctggcg atcctgccgg
     1021 gcgtgaccct gcagcagttg tggcagtcgc tgggcacggc cgaacgtgcc ctgcagctga
     1081 tcagcgcgat ggtggtgctg ttgggcatgg tgtcgctggt ggcgctgctg gtttcgaccc
     1141 tgcaggaacg gcggcgtgag atggccgtgc tgcgtgcgat cggtgcgcgg ccgggttaca
     1201 tcgccgccct gctggtggtt gaagcggtgg cgaccagcgc gttggcctgc gtgctcgcgc
     1261 tggcggcgct ggccgtggcc agcctggcgg gccgcgcgtg ggcgctgacc agcttcgggc
     1321 tgtcgatcac ccatgtctgg ccggacggcc gcgagctggc ctgggccgca ggcgtgctgg
     1381 tgatcagcgc ggcggccggg ctggtgccgg cgctgctggc ctatcggcgc acgctggccg
     1441 atggcctgtc gccgggaggc tgagcatgcg ctgcttgtgg atgttgccga tgctgctgtt
     1501 cctggctgcc tgcgagcggc cggtggatag cggcgtgcag gcgctgccgc cgtcgccggt
     1561 gatcgaccgc agtggcgccg tggctgcggg cacggctgaa gaacaggagc tggactggct
     1621 gcagatgatg ccgggcgatg agctggccgc gctggagcgg ggcgagggcc ccgaggtcga
     1681 gcacaacggc aaccggcgca tgccgcagtt cggcaccttc cgcaccgtgg acgcggtgct
     1741 ggaacggccg gtgcgcctgc cgggctacgt ggtgccgctg gccaacgcgc aggacgggcg
     1801 cctgaccgag ttcctgttcg tgccgtatta cggcgcctgc atccacgtgc cgccgccacc
     1861 gcccaaccag atcgtgcacg tgctgctgcc gcgcccgatc gaaatgccgg acatgtattc
     1921 gccgttcttc ctggccggca ccctgcgcgc ggagcggctg gacgacgacc tggccggttc
     1981 tgcctacacc atgcgcgatg cgcacctgag gccctatgaa ccgtgagcac gtcgccatgc
     2041 tggtgggctg cctgtgcctg gctggctgta cgcagccggt gccgaacgcc gcacctgtca
     2101 gcaccgcgca gaccgcgcat tccgcgcagc caacggtggc cgatgctccc atcaaccgct
     2161 gggatgcgct gcggcccgat gaagtgacct atcagcggcc gccgccgcag atcggcctgt
     2221 cacgcaatgg catggacggc gtgggcggtt tgatcgacga caccggttcc ggcacgccgc
     2281 cggggcagga gatcgaccat tccagccccg accgcgccag gcagttcggc tcgtcgcagg
     2341 tggtcgatgc cgccgatggc cgcgctgtgg atctggacgg ctacgtggtg ccgctgggca
     2401 ccaacgacgc cggtctggtc gacgaactgc tgttcgtgcc gttctacggc gcctgcatcc
     2461 atgtgccgcc accaccgccg aaccagatca tccatgtgac cctggccacg ccgatcgcgc
     2521 tgggcgacct gtgggacccg taccggcttg ccggccgcct gcaggtgaag cgcttcgatg
     2581 cggatatcgc cagcgcatcc tacgacgccg cagcggcaac gctgacggcg atccacaact
     2641 gatgcgtgcg cgctgggtca tcgttgcggg cgtgctggtg agcggcgtgg tgttggccat
     2701 gtggtggcag cggcgtgccg cggtctccga gccgccgacg atcgcgttcc cggcgcccgc
     2761 ggcggatgcg cgccagcgca tcgaacagcg catgatcgag gaaccggcct ttcgcaacga
     2821 cgtgctgttc ctgttggccg ccacgctgcg tgatcgctgc cagccggcac aggcggggct
     2881 gttggcgcgc atggccaatc gtgcgtcact gccggtgctg gcagcggtca gcacggtgac
     2941 ccagcaggat cccacgcttg accggccgat ctaccagtac atccagcatc gcgccgatgc
     3001 cctgcgctgt ggccagccgt tgcagatgcc gctggcggcg ggccgcagca tggacgtgga
     3061 catcgaacag tacgcacgca ccttccccga cagttacttc gatccgcagc gcagcagtga
     3121 accgcgcgat ttcgctggcc tgtcgttgca gcagcgcgcc ggcaatgcct gcaacagtgt
     3181 ggtgtattcg gtgctgccgc tgggcggcac cgactggcgc tgcagcagcc tgcgcgccaa
     3241 cgcacgcggg cgggtgcgcg gcctgtgcga ggacgaactg cgccgccagc acggcggcat
     3301 cggcggcgag ctggacatgg cggtggggca gggcatgcag gcggccgtgg tgtccgcgat
     3361 ggccgcattg ccggaagact gccggtgagg gtttacccgt agagcaggcc atgcctggct
     3421 ggggtgtccg atcgagcagg ttagcctcta cagaagctga atcgatcgat tccgaccgtc
     3481 ataactatac aggacatcct gtatagttat gacggtactt cacccccatc aggtttcccc
     3541 atggctctgt cccagccctt ggccggtgct ccggccctgt cgcgcgcccg ccgctgggcg
     3601 ctgttgttca ccgtggccgc cggcctgctg ctggtcacgc tggacaactc cgtgctctac
     3661 accgcgctgc ccacacttac cgaagaactg tcggccagcg ccggccaggc gctgtggatc
     3721 atcaatgcct atccgctggt gatggccggc ctgctgctcg gcgccggcac gctcggcgac
     3781 cgcatcggcc accgccgcat gttcctgatc ggcctggtgg tgttcggcgt tgcttcgctg
     3841 gctgcggcat tcgcggagag tgcggcgcag ctgatcgctg cgcgcgcgtt cctggcggtc
     3901 ggtgcggcgg cgatgatgcc ggccacgctg gcgctgatcg gcctgagctt ccacgaagag
     3961 cgcgagcgca acatcgccat cgcgatctgg ggctcggtgg cgatcgtcgg cgccgcgctc
     4021 ggcccgatca tcggtggctg gctgctgcag catttctggt ggggctcggt gttcctgatc
     4081 aacgtgccgg tggtgctggt cgccttcgtg gccacgctgc tgctggcgcc ggaaggccag
     4141 cgcgatacct cgcgcccatg ggatctggtg tcgtcggtgc tggcgctggc cgcgctgtcc
     4201 gggttggtgc tggcgatcaa gtcgctgatc gccacgccgc cgtcgtacgc gctgggcgcc
     4261 ggcgcgctgc tgctggcggt catcagcggt gcggcgttcg cgcggcgcca gcagcagctg
     4321 ccgtacccgc tgctggactt cgcgatcttc cgcaatcccg cgttcctggc cggcacgctg
     4381 tcggcggtgt tcaccctgtt cgcgatggcc ggcctgcagc tggtcaccac ccagcgcttc
     4441 cagctggtgg cgggcttcac cccgttgcag gcgggcctgc tggtctcggt ggcggcgctg
     4501 ggcagcctgc ccagcgcgtt gctgggcggc agcatcctgc accgggtcgg cctgcgtccg
     4561 ctgatctgcg gtggcctggc cgcaggcgcg gtgggtgtcg gcgtggttgc gttcggcttc
     4621 ccgcacggcc tgggctgggt ggtggccggc atggccatca ccggcttcgg catgggctcg
     4681 gccatctcgg tggcgtccac cgccatcctc aataatgtgc cggcgcaccg tgcgggcatg
     4741 gcctcgtcgg tggaggaagt ctcctacgaa ttcggtggcc tgctggcggt ggcgatgctg
     4801 ggcagcctga gcgcggcgat gtacagcgcc ttcctgccgg cctcggccga tatgccggcg
     4861 ctggcacgcg agggcttcac ccaggccctg catgtggcac gcgagagcgg gcagggcgag
     4921 tggttcacgc tggccacggc tgcgtacgac cgcggctacc agatcgtgct gctggtgatc
     4981 acggtgatgc tggcggtcgg tgcgacgatc atcgcgcgcc tgctgcgcgg ccgagtcggc
     5041 agccgcgagg gcgcggccga tcgcgtaaaa tgatgcgatg agaaccagca agcgcgaccg
     5101 catcctcgac gccgccgtca acgtgatcaa tcgtgacggc gtgcgtgcgg tgaccttcga
     5161 gtcggtggcg gccgaggccc agctgacccg cggtggcctg ctgtaccact tcccctcgcg
     5221 cgaggcgctg ctgcgcggca tcgacgagca tctggtgcag gcatgggaag cgtcgatgga
     5281 agcgctgctg ggcaagcgcg cggatgaggc caccgcgctg gagcgctatc agaccttcgt
     5341 gcgggtgtcg gcgcagagcg ccacccgtgc cgagctgatg ttcatgctcg aatcggccga
     5401 cccggatgcc gatgagcgcc cgtggggccc ggcggtacga cgctgggcgc cgttgccgcc
     5461 ttcacccggg caggacgacc cggccgcgct ggacaatttc gtggcgcggc tggcggccga
     5521 tggcctgtgg atctacgaag cgatgtacga agggcagctg gatgaaagcg tgcgtgccca
     5581 ggtggccgaa cgcatcgccg ggttgctggc caagtctggt ggggcggccg gctagaccat
     5641 cggccatcgc gcgggcatcg ctcttggtag agccgaccgc tggtcggctg ccatgtagcg
     5701 tcgagccatg ctcgacggcc tttcaggcaa ggccggccag ccacgcccgt ggcgatgccc
     5761 ccagccgctt gcggaaggcc ttcgacagcg acgcggtatc ggcaaacccc acctcgatgg
     5821 cgacctgctt gaccgccacg cccgcacgca gctgcgcgca ggccaggctc agccgccagt
     5881 ccagcaggta gctcgcgggt gtcgcctgca tcacctcctt gaacactgcc gcgaaggcac
     5941 tgcgcgacat gccggcggtg gcagccattc gcggcagcgt ccattcgtgc tgtggcgcct
     6001 gatgcattgc gaccagcgtg cgcgccagcc ttgcatcgga caggccgcgc atcagcccat
     6061 ggctgacacc cgccgcatcc gggtgatcga tcacccagcg caggatctgg atcaacgcca
     6121 cttcgaacag gcggttggtc agcagccgtg aaccacagcg ttggcgatca gcctcggcaa
     6181 acagcaggtg cagggtgtcg tccagttcgc tgatcgcagc cagcggcacc accatcaccg
     6241 gcggcagtga ctgcacgatc ggattgcgcg caccaccatc gaaatccagc gtggcgcagg
     6301 tgaaatccgg tccctccagc ggcgcgttgt ggaacacgtg gtgcagcggc tgcgggtaca
     6361 gcagcaggct ggggctgtcg atcttcagtc gtggcagtgc ggtatcgcca tcgggatggc
     6421 ggacctccat ctcgccctgg cgaaggatgt gcaggaacgc gcgcccgggc tgcggcgcga
     6481 acacgtggcg tccacacagc ggcccgctgt ggaacagcgc ggcctgcacg cggaaacgct
     6541 ccagcagcga ggacaggcgg tcaggcgcgg aggtatccgt ctgggttgca gaagcgttca
     6601 tggacgaatg gacaatacaa gcggccgata ttgcctgata tgtccatgga gtctacctag
     6661 gatggccggg tcgtccaatc ccgggcgctt tcccaaggag atccaccatg tcccgtgtcc
     6721 ccctgatcga tgcatccgcc accaccgccg accgccaggc cctgctgggc caggtgcatg
     6781 ccgccttcgg tgccactccg gcgatgttcc gtgccgtggc caattccccg gccgcgctgc
     6841 agagcatgtg gggggcgttc ggtgcgctgg gcgctggccg cctgtccccg ttgctgggcg
     6901 agcagatcgc cgtggccatc gccaaccgca atgcctgcga gtactgcctg gccgcacaca
     6961 ccgcgctggg tcgcaaggcc ggcgccagtg gtgaacagat ggccgccgcg cagatcggcc
     7021 agtccagcga tccggccacg gccgccgcac tggacttcgc actgaaagtg gtcgagcagc
     7081 gcgcgcagat cgccgatggt gatgtgcagg cgctgcgcgc ggcgggtttc gacgatgagc
     7141 tgatcgttga aatcctcgcc catgtggcac tcaacctgtt caccaactac gtcaacgtag
     7201 cgttcgacgt gccggtggat ttcccgaagg tggcgctgcg ctgaggcatg cctcggccgg
     7261 gggcgaggtg ctcccggccg gtttcagacc gccgtgtcgt cgtccgcctg cagccgctcc
     7321 ggatgggtat acacgttgaa tccgttctcg cgtgcgaacc cgaccaggca cagcccggca
     7381 ctgcgggcca ggtcgatcgc cagcgcggtc ggcgccgaga ccgcggccag tacgctggcg
     7441 ccggcacgca ccgccttgct gaccatctcg tagctggcgc ggctggagat caccagcagg
     7501 ccgccgtcga tgacgtgttc gttgtggtgc agcgcgccga tcagcttgtc cagcgcattg
     7561 tgccggccga catcctcgcg cacccaaccg atccgcccgc tggcgtcggc ccaggccgca
     7621 gcgtgggtgg aaccactgac ttcgttcatc ggctggtgtt gcgacagggt ggccaatgcc
     7681 cgttgcagcg cggcatgcgg ataggtgcgg cgtccgcgga tctgcggcag cggacgcagc
     7741 acgtcctcca gttgccgcgt gccacacagg ccgcagccgc cacggcccgg cagcaggcgt
     7801 ccgttggccg ggtccagatc ggcgccgggt gcgtcgtcgg tcacggtcat ctgcagctcg
     7861 atgccctcca gctgtggccg cacatcgatg gtcaccagct gcgacggcgc ggtgatcaat
     7921 ccctcgctga gcgagaagcc cagcgcgaaa tcttccaggt cgcagggggt agccatcatc
     7981 accgcgaagg cggcgccgtt gtagcgcatc gcgaccggca cttcctcggc caccacgtcg
     8041 acctgctgct gttgcccctc gctgcgccag cgctgcatcg ggcgctgggc cgtgccggca
     8101 ggcggggtgt gcggcggggt ggagtcaggc attcagcgtg tccgggcaag agggaaacgc
     8161 aggtggtgga ccacccacgg catcgagaat agcgcagtgg ccgcgcgctg acgcggtggt
     8221 aaccgttgtc atgacacgct gtgctgcaat cggttccagc ctctggcgcc gtcgcgtgga
     8281 ccatgcttga ctgtagggct tggcgagcgg ccgaatggca gcacgcccgc attccgcgcc
     8341 gttctgttgt tgcgttcctc ccgccaggtt cccgaacatg tccgagcaga agccaccgcg
     8401 ctacaagccc tacaaccagc cggccggtgg ctggggcgcc gccggcgcca ccgccaaggt
     8461 gctgctgcag cagagcgtga tcggcaaggg ctccaaggcg ctgctggcga tgaaccagcc
     8521 gggcggcttc aagtgcccga gctgtgcgtt tcccgatgcc gacgagcgca ggaagctgga
     8581 attctgcgag aacggcgcca aggcgctggc ctgggaagcc acccagttcc gtgccgggcg
     8641 tgagctgttc gcccagcaca ccgtcaccga actgatggcg cagaccgact actggctgga
     8701 gatgcagggc cggctgaccg agccgatgcg ctacgacgcg accaccgatc actacgtgcc
     8761 gtgcagctgg gacgaggctt tcgcgttgat cggccgccat ctgcaggcgc tggacagccc
     8821 gcaccaggcc gagttctata cctccggccg cacgcccaac gaagcggcgt tcctgtactc
     8881 gatcttcgtg cgcgagttcg gcaccaacaa tttcccggac tgctcgaaca tgtgccacga
     8941 gccgaccagc cgtgggctgc caccggccat cggcgtgggc aagggcacca tcgtgctgca
     9001 ggacttcgag cacgccgagg cgatcttcgt gatcggccag aacaccggca ccaattcgcc
     9061 gcggatgatg agcaacctgg tcgaagcgcg gaaacgtggc atcccgatcg tggcggtcaa
     9121 tccgatgccc gagcgcgcgc tgatccgctt cgccgagccg caggacgtgg tgcagatggc
     9181 cacgctgggt tccaccgaaa tcagcagcga gttcgtgcac atccgcatcg gcggcgacct
     9241 ggcgctgatc aagggcatga tgagggtgat gtttgaacgc gaggcgcagg gcgagcgtgt
     9301 gctcgaccac gacttcctgg ccgaacacac cgtgggcctg gatgcgctgc gcgacgatgt
     9361 gatggcgcag gactgggacg atctcgttcg cgtttccggc atctccgaag cgcagatccg
     9421 ccgctgtgcg gagatctaca tccgctccaa cgccaccgtg atctgttacg gcatgggcct
     9481 gacccagcac cagtacggct cgcgcctgct gcagcaggtg gccaacctgc tgatgctgcg
     9541 cggcaacttc ggcaagcccg gtgccggcat cgggccgatc cgcggccact ccaacgtgca
     9601 gggtgaccgc accgtcggca tcgacgagaa gcccaagccg gcctacctgg accgcgtgca
     9661 gcaggtgttc ggcttcgatc cgccacgtga gcacggccac catgtggtcg agtcgatcga
     9721 agcgatgctg gatggcagcg ccaaggtgtt catcggcctg ggcggcaatt tcatccatgc
     9781 cgtgcccgat acgccgcgtg cctatgaggc gatgcgcggc ctggagctga ccgtcggcat
     9841 cgccaccaaa ctcaatcgtg ggcatctggt gcatggccgc gatgcgctga tcctgccggt
     9901 ggtggcgcgc tcggaacgta tcgtgacacc ggccggcgag cagttcgtca ccatcgagga
     9961 tgcgatgtcg aacgtgaccg cttcgcgcgg tgtgctggaa ccggtcagtg ccgaggtgct
    10021 gcccgaggtc gagattgtct gccgcatggc gatggcaacg ctgcctgaca gcaaggtcga
    10081 ctgggccgcg tgcatgcacg actacacccc catccgcgac ctgatcgcgg cggtgtaccc
    10141 ggagatctac accggcttca accagcacat ccagcagccg catggcttcc acctggatat
    10201 tccgccgcgc cgccgggtgt ggcccacgcc caatggcaag gccaacatcc tgctgatgcc
    10261 cggcctggac gtggacgagc cggtggatga ccccgagatg ctgcggctgg cgacggtgcg
    10321 ctcgcatgac cagtacaaca ccaccatcta cagctacaac gaccgctacc gtggtgtgta
    10381 caacgaccgc atggtgctgt tcatgaacgt cgaggaccgg ctggcacgcg ggctgcagaa
    10441 ggaggcgcag gtcagcctgg agacgatcag ccgcgatggt gtgagccggc gcatcgatgg
    10501 cctgaccgtg ctggactacc cgatgccgcg cggcgcgctg gccggctatt accccgaact
    10561 gaacccactg ctgccgctgg actactacga ccggatcagt ggcaccccgg cggccaagtc
    10621 gattccggtg cgggtacgtg cgatggcggc gtcgacgacc tgatgcgcgc atcggctatc
    10681 atcgacgcgt gaacctgcct ggcctgctgt tgcgatggat gctgcttgtt gccctggtgc
    10741 tgaatgcacc ggcgctggcg ctcgcgtcgc tgccggatgc atcggtgccc acagcagggc
    10801 attgcgtcgc cccgcattcc actgccatgg acggatgctg cgacgaagcg acatcaacgc
    10861 tctgcgcgag cggtgagtgc gaatgcccac cggcctgcct gggcatgctg gccacgttga
    10921 acggaacgcc cgcgtcgccc tggcgcgagg cgcctccccc cgccagcgca cggcaacatg
    10981 cgccgccgcc tttgccggac ccgttgcggc cacccatcgg ttgattcctg caggcgcgca
    11041 agcgcctgcc atggctgctc attctactta cgaccctgcc tgcgccattg atgcgcgggt
    11101 agcgggcggt actgcccgca tctgcaaagg aatcaaccca tgaaccgttc tctctccctc
    11161 ggcctgctgc tgggcactgt gcttgccact gccgcctgcg cacgcgctgc tgaagacgcc
    11221 accgcggcgt cgtctgcagg gcaggccccg gcggcaccca tcaaggccag cccggcctcg
    11281 atcgatcccg cactgccgat cgctgtcgtg cacaagaccg ccagctgcgg atgctgcggc
    11341 atctgggtcg accatctgaa ggccgaaggc ttccaggtgg aggtgcgcga taccgatgac
    11401 atgaacccga tcaaggtccg gctgggtgtg ccagtgggca agggctcctg ccatactgcc
    11461 gaaatcggcg gctacgtggt cgagggccac gtgcccgccg aggacatcaa gcgcctgctg
    11521 gccgagcgcc cggcggcgcg cggtctggtg ctgccgggca tgccggccgg ctcgccaggc
    11581 atggaaatgc cggatggcta cgtgcagccg tataccgtcg agctggtgcg caccgatggc
    11641 agcatcgagg cgttcgccga gcatgggcag gatggctgac cttgtagagc cgagcccacg
    11701 ctcggcttgc tctttgtaga gtcgagctgt gctcgactgt tcttcgcttc agtcgagcaa
    11761 gctcgactct acggaatcaa cgggccagga ccgtttcctt ggccagctgt gcgtcgaatt
    11821 tctcttcggc ctcatccgcg taggccttgc aggtcagtgc cttggcacct gccttgctgc
    11881 cggcggcata gtcccagtgg ctggcgcccg ggtgtggcgt cagcagcagg tcgcagggca
    11941 gcccgcgcac ggtggcgaag ctgcgcgtgt agtcctcgat caaacgcgga tagcggacgt
    12001 tgccacgcag ctggtagccc ggcgcgctca ggctgtcggc gtaggcgatg cgcaccggct
    12061 tgccgtcgcg cgtgtcggtc caggtccagg ccgtgctgcc cggggtgtgc ccgggcatga
    12121 agtgcgcagt gaaagcgatg ccgcccacgg tgaccacctc gccatccatg acgatgcggt
    12181 cggtgctggc cggcggatag gtgatgtcat ctccgaagtg caggtcatca ctgccgccgc
    12241 gcgccagcag gaccgctgat tctgcgttgg ctaccacgcg cgctccggta cggcgcttca
    12301 gttccgccac cgggccggcg tggtcggcat gtgcatggct gagcaggatc agccgcaggt
    12361 cctgcggtgc cacgccgcgt tccttcaggt tgtccagcag gtggccggcc atctgtggca
    12421 tgccgccgtc cagcagcacc gcgccttcgc tggtctgtac cagcagcgcg gtcaggctct
    12481 cggtgccgat ctgccaggtg tggtcggcaa tctgcagcgg cgccatcggc tgcagccagg
    12541 acgcatccac ggtgtatgcc cgcagctgtg gcagcggtgt ttcggcggcc accgcgtggg
    12601 cgaccggcag tgcagcagcc agggtgaggg cgagcaggga agagcgcatg gtccaggtcc
    12661 gcttgaagga gcttggaaac tatcatgggg ccccagttgg ctgaatcgca tacttcttat
    12721 cggagtcatt agctggccga tggcacgccg aatcatcaga cggagtcagt tgacgcccag
    12781 cctcaggaag gaggtcgagt attggaaaag atcgaactgt cgaccgtaga gcctcgcagc
    12841 aaggaacagg agtggcaaac gcttcgctct cgaacgacta ggtcctctgt agttctctag
    12901 aatccgctct gaaagagtgg gaggatcaat ttcatcgtcg atgcttgata tgtcggggac
    12961 tgctgcgctc cctgcaagca actgcaaggc atcccaatgt ggaagaagac gcaatcgttg
    13021 gatcatggcc tgactgacat catccctatc ctttgcctcc atgagcagga tttttcgcga
    13081 gccatccacc aatgccttga aagaggcggg atgtccgaag cgaaggcatg ccaggaagca
    13141 gtctactagc gggatagtct ccatcgccga ttcgcgcgta tggatgaatg ctgtgatcat
    13201 cgtgactgct tgctcctggt cacgaagcgt cagtgagaac gtcttcgcaa actgcgggaa
    13261 tgcatccata tactcgccct tgagaacgcg tactcccagt tcgtcggatt gaatggcgag
    13321 caccgcatgc tcaaagtcgc ggccatttgg aagttgaatt tcgctgggca atacgtgctt
    13381 tgattcaggg ttgatgcacg tggctaccag atgcgaggaa tagatctctg gattgggttg
    13441 tcgcaaatgg aactcatagt cgaagaactt tcgaaggtag agctcgccat ccacgtggat
    13501 gccatacacc gatcgaactg ccgcgggtag gtttccgcga tcggaggcaa tgaggaagga
    13561 aatcccggga acatcgaagt agtgcttgat gcgttccagc atcctgatgg catgatctgg
    13621 acggcagcgg tcgagctcat caatcatcag cagcatcggg ctcgggctac ggtcgtggcc
    13681 tcggcccgta accaggcacc ttgcctcagt cagtgcatcc ctgaagtcct tctctgcagt
    13741 gctcctgttc ttctgcatgt caaggagccg ctccgcaaag gcgccggcgg atcgaaggac
    13801 gtctccgctt cctggcgtat gaagatcggc gacaatcgaa gttgccggaa gcaggatctt
    13861 tgatccgaat ttggcaagac gtgagaggca actatccact ttctctgaga gggactcgtc
    13921 cttcctcctc agttcttcaa gatgcagtga aagctccgcg atgatggcta caagcggatc
    13981 ggcgcaatca tcggtcttcc acgcatcgat gcgaactgta ggaattcctt tcgcaccctt
    14041 catatgcaag gcgagacgct tcagaaaaac cgtcttcccg ctgccccatg gcgactggag
    14101 agagatcacc aatggagcat ctgtactgga tgcgatcagt cgagcaagca tttccccctc
    14161 tgcttcccgc tcgaacggat cgtcttccca aggtgccgac tcgctgattc ttgggcccgc
    14221 agcctttcta agtagcgtca tccctgattt ctcacttctt tctctaaaga agtgatagta
    14281 ctagctgtga gtgtttgttc cagcgcccga gaaggcgctg gaacaagccg cctcagtacc
    14341 ggtactgcca gcccagcgtc agcacccggc cacggccgga gaagtaactc gggttcgaag
    14401 gcgtggtctg cgagtagtag ctgatgtact gcctgttggc caggttctgc acgcccaggg
    14461 tgaagctgtg cttgtccagc gcgtagcgcg cgaccaggtc cacggtggtg tagcccttga
    14521 actcggctac ccgcgcgccc tgcaggtcga agtcgcggtc gaatgcgcgg ctggcctgca
    14581 ggcgcgtgct cagctgcggc gtccagttct gctcccagaa cgcggtcaga cggttcggcg
    14641 cgatgttgac gccggccaga tcgctgtcga ggcggccatc gaggttggcg tcgtagcgac
    14701 cgttggcgcg tgcgtagccc aggccgaggc ggctgtcgcc caggcgcagg cgcaggttgg
    14761 tctcgaagcc ttccacgcgg gtggcctggc gctgcacggc gtaggcatcg atgcccgggt
    14821 cgtagaccag caccgagccg agtttggatt cggaggtgta gtaggcgacg tcgccgctga
    14881 agcggccatc gtcgtactcc agcccgattt cgcggttgtc cgacaccacc ggggacagat
    14941 cgatcaggct gtccacacgc tggccgtcac ggttgatcgc gcgcagcacc cggccgacgt
    15001 cggccaccgt gtaaccctcc gagtaggagg cgtacgcatt gaggcgatca ttgatgtacc
    15061 agaccgcgcc gaagttgggc agggtctcgc tcatggtcgg cttgccgccg gtcaccttgc
    15121 gcgcgccata gcggggcagg gtggtgtagt cgcctacttc cagctcgccc ttttcgtagc
    15181 gcaggccgcc ggacagcatc aggtggtcgg tcggccacca atgcagctgc agcagtggcg
    15241 acaggctctg gtaggtggtc tgcggcaccc agttcatgcc gctggccagc agcacctggt
    15301 gggtgcggtc gcgcaggccg tccaggccca gggtcacgtc cagcgtggtg tcggcgatgc
    15361 gggtccagct ctgggtcagc ttgaagccgc gcttgtccga ttcgttctgg gtctggtccc
    15421 acgcagcatt ggcgccggtg ttgccccacg ggtcccactg gctggcgcca tagcggccct
    15481 cgaaatcgac cgcgaaggcc tgcgcctgga aacggccacc gagcaggtcg gcggcgctgt
    15541 agtccagggt cagcgagcgc gagcggttca tcggcggctc cagcggcgtg tcaccgcgca
    15601 ccgaaatcgt cggccggccg gtgcggtaat caccgttgac cgccaggtag ttgtccagcc
    15661 cgcgcagttc gtagcggttg gccatcagct gcaggcgatg gccctcggca atggtccagc
    15721 ccagcttggc gaacacgttc gacgaggtcg aatccatcag ctcgccctgc gcattggtgc
    15781 cgatcgaacg gccctcgcca tcatggaaca ggccttgtct ctcataggcc aggccggcga
    15841 ccaggtcgaa ctgctcaccg cgcacaccga ccagcgcaga accgcgctgg ccactgtcat
    15901 cgcggcggct gggcagggcg ctgctgtagt tgatgttggt gtcgagcagg aacgcaccgg
    15961 gctcgctggg cgcgctgcgg gtgatgatgt tgacgatgcc gccggtgcca ccgatgccct
    16021 gcagcgcgtt ggcaccatgg atgacctcga tgcgttcgat catcgccggg tcgatggtgt
    16081 gcgagtcacg cgagccatcg cgcagcggcg tcgactgcgg tacgccatcg accatgtaca
    16141 ggatgccgcg gccacgcatc gtttcgccgt agttggacat cttctcgcgc gccggcgcga
    16201 aggccggaat ctgcgaggac agcacgcgcg agacgtccga acccagcgcc agctgctgcg
    16261 cgatgtcttc gcgggtcagc acggtgatgg tgttgggcat ggcggtctcg ccctgcggca
    16321 tgcgcgcggt cgaggccgat accgtgacgc gggccagtga ggtcggtgtc gcagccgcag
    16381 gcgcgcgcgc cggggcattg gcctttgccg gcgctggcgc tgccgcggcg ctgaccacga
    16441 agacgcccgg cgaacgttcc tgcagggcca ggccctgtcc cgccaacagc cgctgcaggg
    16501 cgtcgcgcgg ggtgtagcgg ccatccagcg ccggggccgt gcggccgctc acgctgtcgg
    16561 cggcgaacag cagctggatg ccactctgcc gcgccagcgt gttgagcgag gcctgcagtg
    16621 ggccggcggg cagatgcagc tccatcggcg caggcgcggc ggcctgcgcg gcggcgggca
    16681 gggcagcgca gaggcaggcg gcgagcaggg agggagccag ccgacgcagt gcggcgggcg
    16741 aaacagggcg ggtcattcgg gggtccttcg gaggggttca cgcacctgcc ggatgggacg
    16801 gcgcacaacc cacccttgcg aaggcgatca atggcgatca atcgcgcctg cgcaggtgca
    16861 ggctgccatc ggcggcggcg tgcacctgta ccggcaggat ctccggcagc agtgccacgg
    16921 cggtgtcggc gcggtcggcg tcgaacacgc cggacacctg cagcgggccc agggtggggt
    16981 catccagcac gatcggacgg tcgtgatagc gctgcaggat ccgcaacacc tccaccagcg
    17041 gcagccgatc gaactgcagc cgcccggtgg tccagtcggc cgggtcggtg tcgatcgcct
    17101 cgggcggaga gatcgacccc ggctgcgcca gcaggcgctg gccgggcttc aggcgctgct
    17161 cggcatcgct gccctcggcg cgtaccccca cctcgccgcg ccacagggtc acttcgctca
    17221 gatcgccctg gcgatccaca tcgaacaccg tgccgtagtt gcgcacgcgc accggtccgg
    17281 catcgacctc gaagcgtcgc catgccgaat gctgtacctg gaaccgggcg cgcccctgga
    17341 tcaacaccac ctgccgtgaa cgcaggtggc gacgcacctg caggtgggtg ccggcatcga
    17401 gcagcaggtg gctgccgtcg gccagatcga gagcgcggcg ttcgcctgcc gccgtgcgat
    17461 ggtcctgcac ctgccaggcc ggatcgacca gcaacagcgc gccggccatc agcgccagtg
    17521 cgggcagcac gaccttggcg gcacggccgc cgcgacgacg ctgcagcgct ttcggatccg
    17581 gcagcggaaa ccgttccttc agcgcatcgc gatgctggtc gagcagttca tcggtggtgg
    17641 cagcctgcga cggctgcggc agcgtgggag gcccgggtgt acgcctcatt gctgcatggc
    17701 ctgccggcgg cagtcggcca tggccaggcg caggtggcgt tccaccgcct tcaggccgat
    17761 acccatccgc agcgcgacct cggcctgggg cagtgcgtgg atcttgtgca ggatgaacac
    17821 ctgctggcgc cggcacggca tgcgctcgat ggtcgcgctc aattgctgca gcgcctgcag
    17881 gccctgggcc tgctgctcgg gcccgggccg ggggcaggca tcgtccggca gctcggctcg
    17941 cgcttccacc cagtgccggc gcagatcttc ggcgcggcag cgatcaaccg ccgcgtcatg
    18001 cgcgatccgg cgcagcagcg cgatcggctg ccgtgcatcg tgcagcggcg ggcgctccag
    18061 caggcgcacg cagacgtcgt gcaccacctc gcgggccagt ccgggcgagc ggaagcggcg
    18121 gcgcaggtag tccaccagtt cctcgtagtg gcgcgccagc gaagacacca gcggcagcgc
    18181 aggtgggtga ggcgagggca gctgggacat ccggaccggc aacaggggcg aggggcggct
    18241 gcagggaggg tatccctgca cgatgacgca atactaatgg gaaccgttcg cgtttgccat
    18301 gtgccggcag ccattgattg ttcgcagggg ctggaaggtg aaaccacgat catcggctgg
    18361 agcgcagaat cggcgcgggc tagcctgcct gcaggctcaa ggagatcgat acatgcacgt
    18421 gcttctggtg atcaccgccg gcgtcctgct gctgggcgtg ttcctgctgt tcggccggct
    18481 ctggagcgtg ggcagctcgc agctgcctgc cgcgctgatc gcgttcatcg ccacctggct
    18541 gctggtctcg gtggtcaaca tgtggatagg ggtcagcaag gcgggctacg cggtgcgcga
    18601 agaactgccg atcctgctgc tggtgttcgc cgtgccggca ctgctggcgg gcctgctgta
    18661 ctggcgcctg gcgcgctgaa ggcccgccat gagcacccga ctgcgcctgc cagcgctgcg
    18721 ccatcgcgat ggccaccatg cccgcgtgac ctacgaagaa ctgttcttcg acctggtcta
    18781 cgtgtttgcg gtcacccagc tcagccacca cctgctgcac caccttgatc tggccggcgt
    18841 gctgcagacc ctggtgctgt ggttcgcggt ctggctgggc tggcagtacg cctgctgggt
    18901 cagcaactgg ttcgacccgc aggcgccgcg catccgtgga ctgctgtttg ccaccatgct
    18961 gctggcgctg ctgatgtctt cgtccattcc cgaggcgttt gcagaccggg cctggatgtt
    19021 cgcaggggcc tacgccacga tgcaggtggg gcgcacggct ttcgtcctgt tcgaggtcgg
    19081 ccgtaaccat ccgctggccc ccaacttccg ccgcatgctg gcctgggtca gcgtttcggc
    19141 gtgcttctgg ctggccggtg ccgcggccga tggctctctg cgcctggcgt tgtgggcggt
    19201 ggccgtggcc tgcgagtaca tctcgccgat gttcggtttc gcgtttccgg gcatgggccg
    19261 ttcgcacacc cgtgactgga ccatcgaggg cgggcatctg gccgagcgct gccagctgtt
    19321 cgtcatcgtg gcgttgggcg aaaccctgct ggccactggc ggcgtgctca gtgaagtcga
    19381 gcactggagc ggggaagtgg tctcggccgt gctggccacg ttcgccggca cgattgccat
    19441 gtggtggctg tacttcggca tctccagccg cgatgccacc gaggccatca cccatgccga
    19501 agaccccggg cggatgggcg ccaacttcca ttacgtgcat gccttgctga tcgccggcat
    19561 catcgccacg gcggtgggca acgatctggt gatggaccat ccgggtgcag ccgtcagcac
    19621 ggtgtacgcc accgtgatgg tggccgggcc gttgatctat ctgctgggca gcgccctgta
    19681 caagcgcgtg gtctatggac acacgccgcg ctcgcacctg ctgggcgccg cggcgctgct
    19741 ggtgcttggc ctgctgttgc cgtggctgca cctgctggcc gccggatggc tgaccagcct
    19801 ggtgctgctg ggcgtcggcc tgctggatac gcggatgaag cggcgcaccc ggcaggtgga
    19861 gggctagaac ccgccgccgg tcttgaagcc accgccacca ctgatgccac caccgctctg
    19921 gaagctgctg ccgctggaac tggagcttga actcgaactc gaactcgagc tggagcttga
    19981 acgagagctt gaactactgg atccgcccgc aagcaggtcg aacaggctgc cagaggagcg
    20041 ggtggtgctt cggctgctgg tggtgctgaa gaaggatgcg gcgacggtgg ccggggcggc
    20101 ggcccggtag ctcggtgcct cgtacgcctg acgctcgata tccgcagcgg cctggtagct
    20161 cctgcgcgca gcctgcaggc tgtccaggcg cttcttcagc acggccattt cgcgggtgtg
    20221 ctcgcccacc atgccatcga tctcgcccag gcgcaggcga ctgcgatgga tgcgttcgag
    20281 cacggcatcg tcctcgccgg aggcggtggc ggcgacgcgt cggtacaggt cgtccatgct
    20341 cttggccgac agcgtgcgcg ccagcgcggt gagcagggcg ccgccttcgg catcggtcca
    20401 actgcggaaa ccatcgatct gtgcctgctt ggcatccacg gtctgccgat gcagctgctc
    20461 ggccaacagc gcctgcgcca ctgcgttctg tgccgtctgc aactgctggc gcagcgggtc
    20521 gccgcccgcc tcggcgaggg cggcgtcgcg ggcctgctgc accggctggc gggccgcctc
    20581 gacgtcggca cgagcccgtc cggcatgctc ctgcagatag ggcggaagct cgaccagcgt
    20641 ggcgtactcg cgacgggcac ggtcgaagcc gcacagctcg gccagccagc catcgaccgt
    20701 gcgcaccagc ggccaaccgc gataggccgc gctgccgaag cggcgatggt gcaggtacat
    20761 gaagatcggg tcggcctggt aggcgccggc cttggcatca tgctccgact gcgcagaggc
    20821 ggccatgcgt tcgaccgtgt cggcgcgtgc ctcggccagc tgcaggtcgt cctgcagcac
    20881 cctgtaggtg ggttccgctt ccagcgtggt gtccacccgg ttctgcaggg cctgccactg
    20941 gccgccagcg gcgtcgcgtg cggcaacggc ctcctgcgag cgctgctgca gcgactgttc
    21001 gatgtccagc agcgcctgca gctcgtcagc cagcaccgcc gctttgcgat cgcggcgctg
    21061 caggtcggcg ctggactgct gcagtaggtc cctggccacc atcggcggcg aatcaatggc
    21121 ggcctcggcc tgcaggcggg ccagtgcatt gaagtcttcg cggacccggc cgtgcagcgc
    21181 ttcctgctcc ttgatcagtt ccaggcactg gtcgccgcgc gtggccagtt gtgcctgcac
    21241 ctggccgata tcggtttcga catcggcaat cgcgtcgttc agatctctca tgtcagttcc
    21301 ttacccatca ccattcggtg atgtagccgc cggtggtggg catgcggaaa cgcggcgaca
    21361 ggctgccgcg cggcttgctg ccgatctggt catcttcgat gatgccgttg tcctgcttgt
    21421 cggctgcgac ccggttgtag gttgcctccg gcacgcgcac ggcgaacagc gaggcccatt
    21481 cgtccttgcc ggtttcctcg ttgcggatca gcagttcgga ggcgttgccg gcctcgtcca
    21541 gcgcttcggt caccaggtag tagttgcggc tgccattggc cttttcgctg tagcgccaga
    21601 cgccggtacg ctcaccgtca cggttgacga tgcggtagat cagggacttg gacagcaacg
    21661 ccaccagctg gccgacctcg tcgatcgccg gcccggcttc ggccagtgtc tcgacgcgga
    21721 cccgctgggc ggcctggtcc agcgcacgtt ccagccgttt gcggtcttcg cccgcaacgc
    21781 ccgtggccag gccgtcggcc ttgagctggg ccagccgctc gttgagcgcg gccagcttgt
    21841 cggcgctgcc gatcagttcc ttcagcgtgg tgaccgccag ggtggccgcg gccatgtcgc
    21901 cggcgcgaag tgcgacgtcg ccggcggtgt aggcgcgtgc gcgtaccttc tcggcgtccg
    21961 gtgtgaggcg tgctgctttc gcggccgcat tggtggtgtc cagcagttcg ctggcatcga
    22021 tggcctggcc gagggtggtc acccgctcgg tcagtgcggg cagggtttcc ctggcgcgcg
    22081 ccagcagcgc tgcggcggcc tgccgctgct gctccacctg ggcggcggcc tgttcgccgg
    22141 tggcgctgcc gccgctgctg atacgcgtga gcttgtcctt gcggatcagg gtgggcaggt
    22201 ccgccatcgc ggtgggcacg ccagcaaagc gccgctgtgc ttccgccagc gctgactggg
    22261 cgcgctcggt caggggctgc aggcgctccg cactggcgtt ggcgcgcggc agcagcccct
    22321 gcagggactg ttcctgccgg gccagcaggg cgcgtgctgc tgcggcctcc cgctgctgcg
    22381 ctgccacctt gtcgttcaac acctggacgt tcttctgcac gttgctttcg tgcacgaacg
    22441 cgccgaagct gcgcgccatc atcagcagcg caccgagcac cagcagcacc aacgccgcca
    22501 tcagcgccca tttcagcagc cgacggcgat cgatccagcg tcgggccaac caggccttcc
    22561 agccacgcgg cgcagcatag aggtaacgct gctcacgctg ggcctggatg ccggcctcga
    22621 cgatctcgtc ggagacctcg ataccctgcg agcgatacag ttcaagcagg cgctgcttga
    22681 gcctcgcctg gtcatggccg ctgtcggcca gtgccttcat ttcggcattg cggtagcgca
    22741 gctggtcgac cacatccatg gtcagcaacg catcctgcag ctcggcaggg gccatcgtcg
    22801 cactcacgtc agcgcggctc cgggctcggc ggtgcctgta gcagtgcggc gaaacgctgc
    22861 ttgccctgtt cgacatactc ggcaatctcc gccgagtcgc gggtggcctg gctgcgcagc
    22921 tgctcgattt cctgcagcga cgtctcctgg aagcgcacca ccgcatcgac cagcttgcgc
    22981 accgaatcga cgccgatggt ggcgccgtag ccggccttca ggccctcgtg cagcacttca
    23041 tcgccaatgt tggccaccgc ttccagcccc ttggaggtac cctcggtcat cgcattgagc
    23101 gcctgcgtgg actcatgcag ccccatctgc gtggtgaagg ccaggttcaa ggcggtgaag
    23161 ctggtttcgt tggtggagaa gaacaccacc gagcgctcgt tgacgcggcg cttgacctcg
    23221 tgcgactggt gcacgcgcag catgatcgcc tcggaggtgg cgtagttcac ctgcaggttc
    23281 tcggccaggt ccttggccag ctggtagcgc gactcttcgg cctggctgtt gcgcagcgct
    23341 tcatcgcggg ccatcaccag gcggccggta tcggcggcat cggcggccgg gtcggccgat
    23401 tccacgcgct gctgcgcctg cttcagcgtt tcgcgcgctt cggccagccg ctgctgctgc
    23461 agcttcaaca actcatgcgc ctggatctcg gcatccttga tcgacaggcg gaagtcgccg
    23521 tacatctcca gcacgcgcga ttcgcgctgc agctgctcgg ccgaatcgcg gctgacctcc
    23581 aggaacgtac ggcggatctt ctcgaaccgg ctcgggatat cgccgcgggt gaccttcatc
    23641 cacaggttct gcaggcgctc gcccatgtcg atcttgccgt cgcggacctg ttcgaccatg
    23701 gtgctggcat cgtcacggat gctgtcgaag gcgcggacga tctcggtgta gcggtcggac
    23761 accttggccg agctgatttc atcacgcatc acggcattga aatggccgga ctgctgcagc
    23821 acccgggcga tggccaccac gcggccctgg tcaagcgtgg acagctgcga aaccagcgcg
    23881 atggccggtg cgttgttgtc ctgcggggcg gccaggccca ggctgcgcag cgtagccatg
    23941 gcgcggtcga ggtaggtggt cggcgcggta gcggccggcg tggcaaggag agtgttctcg
    24001 ggcatttcga cggctccggt cagggcgtgc tggaaagatc ctgccgcgca gagcgggcag
    24061 atcgctgcgg atgggtgggg cggccgggca ggcgtctcgc gctgcatggc agggccgccc
    24121 tggcgagggc aacggacccg ttgcgaatga gagtggcgtc ctgttcgagc atcgatgaag
    24181 cgttccctgc tgatcgcccc ctggcgattc cagatccatt gtaacggggg tgatggtcag
    24241 gtgaagcccc accgatggca gggtggagta gcgttggcgc acgtgccggg gcaggcaagc
    24301 gaggcctttg tgcagaacct accgcagtgg ttgatctggg ctggactgtc tgccgtgttc
    24361 gcagcgctga ccgcgctgtt cgccaaggtg ggcgtcaagg gcgtcgactc ggacatggcc
    24421 atggccatcc gcaccctgat cgtggcggcg gtgatcctgc cgctggtggt ggtcaccggc
    24481 aagtggtcca acccgctgct gctgccgggg cgcacccagc tgttcctggt gctctccgcc
    24541 ctggcgaccg gcgcctcgtg gctgttctac ttccgcgcgc tgcagagcgg cgaactggcc
    24601 aaggtcgcgg tggtcgacaa gttcagcgtc gtgctggtga tcgtgctggc ctacctgctg
    24661 ctgggtgagc gacccagcct gcgcgagtgg agtggcatcg gcctggtcgc ggccggggtg
    24721 atcgtgctgg ccacccggaa atagcgcagg cggaatgctg tgcgacgctg ccgaccgctc
    24781 tgccttgctg cagggtcagg gcgtccccgc ctgcaggcgg tcgtacatcc gcaccagatc
    24841 gaccagggtg cgcgcgccca tcttgcgcat cacctgcgcg cggcgcacct tcaccgtgat
    24901 ctcgctgacc ccgaggtcgc cggcgatctg cttgttgagg cgcccgcgca ccacgccatc
    24961 gaccacctcg cgctcgccgg cattgagcgt gttccagcgc tgctgcaggg aatcgagtgc
    25021 ctcgccgtcg cggcggcgct ggcgatcgat ctcgatgccc ttgtggatcg catccagcag
    25081 ttcctggtca cggaacggct tggtcaggaa ttcgatggcg ccgtccttga tcgcgttcac
    25141 gcccatcgcg atatcgccgt ggccggtgat gaataccacc ggcagctgca ggccatgggt
    25201 gcccatgctg cgatggaact ccagcccgct ctggccgggc atgcgaacat ccagcaccag
    25261 gcaggccggt gcatcttcca gttcgtggtc caggaacgcc tgggtagagg cgaaggccct
    25321 tacctgcagt cccatcgacg ccaacagatc ttcaagcgcc gcgcgcaccg aggggtcgtc
    25381 gtcgatcacg tagacgatcg gtgccggatc ggcagcaggg gcagtgggct tacgcatgag
    25441 ggacatccgt ggcgatgggc aggtcgaaga cgaagcaggc cccgccgccg ctcgggcgct
    25501 cggcgcggat ctggccgtcg ttggcttcga tcatcgaacg gctgaggctg aggccgaggc
    25561 caagaccgtg tgacttggtg gtccagaacg catcgaacac acgctcggga tggtcggcgg
    25621 ggaggccgac accgcgatcg cgcacactga ggctgatccg cgcgccatcg cgctgggtca
    25681 gcagggacag gcgcctgtca gcggcaggca ccgcttccat cgcgtccacc gcattgagaa
    25741 tcaggttgcc gatcacctgc tgtacctgta cgcggtcggc ctgcaccggt ggcaggtcgg
    25801 catccagcag caacgccacc gccaccccat gccgatccag ctcgctgcgc gacagtgcca
    25861 gcatttcttc caccgcctgg ttcagatcga aggcgcgtcg ctgtggcgcg gcaccctggg
    25921 tcaggccgcg gatgcgcgcg atcacgtcgc cggcgcggtg cgcatcggcc aggatgcggg
    25981 ccacggtctg ccgtgccttg tccacgttcg gcgggtcctg cgccagccag cgctggcagg
    26041 cctcggcact gctggcgatg gccgccagcg gctggttcac ctcgtgcgcg atggaggtgg
    26101 tcagctcgcc tacggttgac gcgcgcgcga cccgcagcaa tcgtccctgg gcctcctgca
    26161 ccgccgcctt ggccgcttcc atgttcaggg ccagataggt ggtgatgccg atcaccagca
    26221 tgccgatcac cgaattgacc aggccgatac ggtaggtgcc gaagcgggtc aggaagaagc
    26281 tcagagcggt cagcgcgatg caggcaaggg ccagcgtgat cagcccacgg gcggccagca
    26341 cgcgcgaggc ggccaggatg accgccgcgt agaaacacgc cgccgcaacg gcgtagtcgg
    26401 tgacggtgtc gatcaggaag atcgccgcca tcacgacgat cagggccagc agcaccagcg
    26461 ggcgacgggg cgacagcgat ggcatcggga cagctccctg gcgtgggcgg aaaggatagc
    26521 aaagcgatgc tgggtagtgc cggccgctgg ccggcagacc gcggcgttca ggcttctggt
    26581 agttgccgac cttggtcggc aggcccgggc aggaatcatg atgcctgagg gattctgccg
    26641 accaaggtcg gcatctacca aagcaacacg tggaagcgct gagccacgcc cggcggaacg
    26701 catccggcgg ccggcgctac tcctccaggc tggcgttcca gaacccttgc agtacgccag
    26761 gcgtggtcgc cagcgttgcc agcacggcat ccagttcgcc ggcatcgacc gtggtggcgt
    26821 acagcactgc ttcaatctcc acatcgcgtt cgccaaacgg ccgctggtcc accgcgcgta
    26881 ccgggtactg cgcctgctcc agcagcagta acagctggtc aagcacgtcg gcctgctgct
    26941 cgcgctggca gaccacgttg atcgcatagg tcgcctcgct gaaggcttcc ggcagcggct
    27001 ggcgctggat gcggttcacc accggtcgca acagcgtgtt ggcggccagc acgaagatcg
    27061 cggccatcac cgcttccggc agcagcttga tgccggcgca cgcacccacc gccgccgagc
    27121 cccacagggt ggcggcggtg ttcaggccgg acacctgcgc gccgtccttc atgatcgcgc
    27181 cggcaccgag aaagccgacg ccggaaatca cataggccac cacatgcagc ggcgacggcg
    27241 gccctccgta caggtcatgg aagcgcacgg ccaggtcgac gaacaccgcc gcgcctaccg
    27301 ccaccagcgt gttggtgcgc agcccggcgg tgcgctggcg cagttgccgt tccaggccga
    27361 tgatcgttcc cagcacgaag gccaccgtca ggctgatcag cgagctcagg gtggcgccgg
    27421 cgttgaacgc cggcaggttc ggattgatgt cgagcatcca tttctccctg gacaagccgg
    27481 ccagtgctta ctgccagccg tagcgacgga tgtagaactt cttcagcgcg gtggtcagca
    27541 ccgcatagcc gaacaggatc gccaccagga acggccagta gccggccggc agggcctgca
    27601 gcttgaagta gccagccagc ggactcatcg gcagggccac gccgatggcc atgatcaggc
    27661 cggtcatcag cagcagcgga ggcgcggcga tgctctgcag gaacggcacc ttcggcgtgc
    27721 ggatcatgtg cacgatcagg gtctgggtca gcaggccgac cacgaaccag ccggactgga
    27781 acaggccctg gtcggctggc gtgcgtgcat cgaacacgta ccacatcaag gcgaagcagg
    27841 tcaggtcgaa gatcgagctg atcggcccga agaacaccat gaagcggccg atgtcgcccg
    27901 ggttccactt cagcggcttg cgcaccagct cctcgtccac gttgtcgaac ggaatggcga
    27961 tctgcgagat gtcgtacagc aggttctgca ccagcagctg caatggcagc atcggcagga
    28021 acggcaggaa ggccgaggcc accagtaccg agaacacgtt gccgaagttg gaactggcgg
    28081 tcatgcggat gtacttcagc atgttgttga acgtgcgccg gccctggatg acgccttcct
    28141 ccagcaccat caggttcttc tccagcagga tgatgtcagc ggcctccttg gcgatgtcca
    28201 ccgcgctgtc cacgctgatg ccgatgtcgg ccgcacgcag cgcgggtgca tcgttgatgc
    28261 cgtcgccgag gaagccgacc accttgccct gtgcgcgcag ctcgcgcacc aggcgctcct
    28321 tgtgcagcgg cgtcagccgg gcgaacacgc gatggtgatg cagcgcccgc gacagtgcac
    28381 catcatccat gcgctcgatc tgcgggccgg tcaggatggt atcggcgtcc agcccgacct
    28441 gggcgcagac gcgggcggtg accagttcgt tgtcgccggt gaataccttc acctccacgc
    28501 catgcgcggc caacgcctgc agtgcctgcg cggcggactc cttcggcggg tcgaggaagg
    28561 ccacgtagcc gaccagggtc aggtcgcact cgtcggcctg cgagtaggcg gtccggctgg
    28621 ccgcggtttc cttcatcgcc accgccacca cgcgcaggcc ctgttcgttc agttcctcgg
    28681 tggtctgccg cacgcgcgcc aggcgcgcgt catccagcgg catgtcctgg ccgttctcgc
    28741 gcacggtgct gcataccgcc agcatctcct ccactgcgcc cttgcagatc agctcgtgat
    28801 gatcctcgcg ctcggacacc accaccgaca tgcggcggcg ctcgaagtcg aacgggattt
    28861 cgtccacctt gtggtagtcc tgcgacagcc gcagcgagct ctgcagctcc acgtgctcca
    28921 gtaccgcgcg gtcgagcagg ttgatcagcc cggtctggaa gtggctgttg aggtaggcaa
    28981 acgccagcac gtcctccgaa tcgtgaccga acacgtcggt atggcgttcc agcgcgatct
    29041 tgtcctgggt gagggtgccg gtcttgtcgg tgcacagcac ttccatcgcg ccgaagttct
    29101 ggatcgcatc caggcgcttg acgatcacct tgcgccgcga cagcagcacc gcgcccttgg
    29161 ccagggtgga ggtgacgatc atcggcagca tttccggggt cagccccacc gccaccgaca
    29221 gtgcgaacag gaacgcctcg gtccagtcgc ccttggtcca gccgttgatc aacaacacga
    29281 acggcaccat caccagcgcg aagcggatca gcagccagct gacactgttg acgccggcct
    29341 ggaatgcggt gggcgcacgg tcggtggcgg tgctgcgctg ggccagggtg ccgaagtagg
    29401 tgcggttgcc ggtcgccaga acgatggcgg tggcggtgcc ggacaccaca ttggtgccca
    29461 tgaacagcag gttgtgctgc tccagcaggc cggccaggcc atcgcccggg tgcgcgaact
    29521 tctccaccgg cagcgattca ccggtcatcg ccgcctgcgc cacgaacaga tccttggcgg
    29581 tcagtacgcg gcagtcggcc ggaatcatgt cgccggccga cagcacgatg tggtcaccgg
    29641 gcaccaattc gcggatcggc aggtccagca ggcgtgccgg gcgacggctg tgcaggtgtg
    29701 caccgaagta ctggtcggcc acgtcggcgg cctcggtacc cggattgcgg cgcagcaccc
    29761 gcgccgtgtt gccgaccagg gccttcagac gttcggccgc gcggttggaa cggccctcct
    29821 gcacgaagcg gatcagcgtg gacagcagca ccatcgcgcc gatcacgatc gttgccttca
    29881 ggtcctcggt cagccaggac accgccgcca gcacggtcag cagcaggttg aacgggttgc
    29941 ggtagcactg ccacaggtgg cgccaccacg gcagcggctt ttcgtgatca acctcgttgg
    30001 ggccgagcgt ggccagtcgc tccccggctt cgtgcgggct gaggccatcg gcatgcgaat
    30061 ccagcgtggc cagcagctcc gcttccggct gctgggccag ggtgaccagg ccggtggtaa
    30121 gcgcgaacgg cgccgcttcg gcgctgcccg gaccgaagcc ggcctcgggc atcgcacggc
    30181 ggcggaacag gttgcctgcg cgacggctgc gcaggaaggc gttgaaccag gcgttgagca
    30241 ggctcatggg actctcctcg aatgtcagag ccggccgggg ccggaacacg aacggaacgg
    30301 atggaacagg tcaggcgtgg cgcatcgcca gcaccgccgg cgaccacggc tgcatgtgca
    30361 ggcgctggct gccgccgatg cacagcggct tcatcgcatc gcgcaggggg tagggcaggt
    30421 ggcacagcac gttgatgcgc tcgctgatcg gcagcagcga cagcgcgtcg gccaccacgc
    30481 gtggcgagcc gagcgagagc gaacgggcga acatgaccgg gccgtgctgc agcagctggc
    30541 tgcgcagggc ggcaacatcg cgctcaccga tcaggcggcg cagggtgatg tagaggatct
    30601 tgtaggacat gggggcgatc tccaggcagg cggcacctgg cgatcccccg tcactcaggc
    30661 aggcagggac cggcgggcag gcgccaggaa caggcaacag gcaggcatcc ggggcgcgtc
    30721 gcgcccggca gggtcggggt ccatctgcgt ctccatgagg ggagggtgcc ggccagggtt
    30781 gccctggcca gtggcgctat tgtccgcccc tgaatggggc agtcctagag gctcgtgggt
    30841 tagcccggct ataccttggt atagccgtgg gcgagagagc gcgcgcggcc aacacggcca
    30901 ggcgcgcgca caggcgcgcc ggcgccggga atcaatgcgc ggccgcaggc gcggtctgct
    30961 tgcagacgtc gtactcgccg cggctcagtt tctggtcgcg gtcggtatcg caggtgtgca
    31021 ggcgctcggc ccagtccggt gcgactgcat ccacttcggc cagggtgacg atgccgtcct
    31081 tgtccttgtc gagggattca taggcaggga gcagcttcac ttcggtgacg tcttcggccg
    31141 cagtggcctt gctggcctcc tgcggcttgg agcaggcgcc cagcagcagg gcggtggcaa
    31201 tcacgagggc agcagggacg aagcggaaac cggtcatggc gtactcctga gggtgtggga
    31261 tcgccagcgt ggcgcccttg gccggatcat cggcaccgct ccgtaaggga ggcgcgaaga
    31321 aggccggtgg tcgcgcaggt gggtgggcca tcgttcacgg gacgccctaa ggacgtccag
    31381 ctgacggaat tgtcaggcag gcgacagcca ggcgccggag gttaccggta aggatggcac
    31441 caggcccgcg cagcccccgc gccggcaccg gtatggactc cccgcatgcg aattcctttc
    31501 ctgtccgcgc gaatgcgtcg ccgccacctt gcactgggtg cgctgttgct ggtggtgctg
    31561 tcgctggtga tgctgttcca tggcgtgtcg cggggtgacg cgcagcccgc cagcaccccg
    31621 ccaccggtgc cggtggtcac cggtcgcgtc gagcagcgcg atgtggcgca ctggcgcagc
    31681 ggcgtaggca cggtgcagtc attgcagagc gcggtgctgc ggccccaggt cgatggcgtg
    31741 ctcaccgagg tgctgttcga ggaaggccag aaggtgcgca agggacagct gctggcccgc
    31801 atcgatgatc gcgcgatccg cgctgatctg ggcggcgcgc aggccgcagt ggtgcgtgac
    31861 cgcgccacgc tggatgccgc acgctcggac ctcgcccgcc tgcagcacct gtccagcgac
    31921 cagctggtgt cccggcagat gcttgaacaa caggcggcga cggtacagca gctgcaggcg
    31981 accgggcacg gcaaccaagc ggcggtggac gccgcgcagg tgcagctgtc gtacacccgc
    32041 atcctggcgc cgatggacgg ccgcatcggc ctgcgccagg tcgatccagg caatctggtg
    32101 cgggccaccg atacgcaggg actggttacc gtgcagcaga ccgacccgat ctcggtggtg
    32161 ttcgcgctgc cgcaggacgc attgccgcag ctgcggcagg cattggcgtc cggtgaagtg
    32221 gcggtgcagg cgctggaccg ggatggtggc ctgctgttgg ccgaaggccg cctgcaggtg
    32281 atcgacaacc aggtggagga aacctccggc accgtgcgcc tgcgtgcgcg ctttgccaat
    32341 gccgatgatc ggttgtggcc cggccagctg gtcagcgtgc gcgtgcgcac cggccagagc
    32401 accggcgccc tggtggtgcc ggcggcggcc atccagcgcg gcgtggacgg cagcttcgtc
    32461 tatcgcgtgc tcggcgacgg cagcgtggaa atcctgccgg tcagcgtcgg cgaggccgag
    32521 aacgggcagg tggcggttca gggcgaactg cgcgtgggcg atgtgatcgt gcgcgatggc
    32581 cagtcgcgcc tgcgcccggg tgtgatcgtc gctgaagccg cggcaccggc cgtaccggct
    32641 gccaagggcg gggccgcccc gtgagtgcgc gtgtctcgct gtccagctgg ttcgtcaggc
    32701 acccggtggc gaccacgctg ctcaccctgg cggtggtgct gctcggcgtg gctgcactgc
    32761 cgcggctgcc ggtggcgccg ctgccggagg ccgaattccc caccatccgg gtcaatgcca
    32821 gtctgcccgg ggccagtgcc gacaccatgg cgtcggcggt tgccacgccg ctggaaacgc
    32881 agctgaccgg cgtgccaggc atcatcgaga tgacctccac cagtgcgctg ggcagcacct
    32941 cgatcacgct gcagttcgat ctggaaaaga acatcgatac cgccgcacag gaagtgcagg
    33001 cggcgatcaa tgccgccgcc gggcgcctgc ccagcgacct gccgaacctg ccgacctggc
    33061 gcaaggtcaa tccggccgac agcccgatcc tggtgctcag cgtggtgtcg gcgcagatgt
    33121 cgatgacgga gctgagcgat ctggccgaaa gccggctggc gcgttcaatc agccagatca
    33181 gtggcgtgtc cgaggtcaac atcgtcggcc agcagcgccc ggccatccgc atccaggccc
    33241 agccggagcg gctggcggcg atgggcatga ccctgtccga cctgcgcggg gtagcccaga
    33301 acgccagcct caaccaggcc aagggcgcgc tgatgggcga gcagcgtacg tccacctttg
    33361 aagccaacga ccagttgttc gatgcgcagg actaccggca gctggtggtg gcctaccgcg
    33421 cgggctcgcc ggtgacgctg ggcgacgtcg cgcaggtggt cgacggtgcc gagaacgcct
    33481 acgtgcaggc gtggccgaac gggcagccgg gcgtgggcct gatcatcagc cggcagccgg
    33541 gcgccaacat cgtgcgcacc actgacgcag tgctggcagc actgccggag ctgcgtgcga
    33601 acctgccggc cagcgtcgat gtggacgtgc tcaacgaccg cacgcgcacc atccgcgcct
    33661 cgctgcacga agtggaagtg accctggtgc tgaccatcgt gctggtggtg ctggtgatgg
    33721 gcctgttcct gcgccagctg tcggccacgc tcatcgtcgg cgcggtgctg gtggtggcgc
    33781 tggtggccac cttcgcggcg atgtatgtag ccggtttcag tctcaacaac ctcaccctgg
    33841 tggcactggt ggtggcggtc ggcttcgtgg tggacgatgc catcgtggtg gtggagaaca
    33901 tccatcgtca tcgggaggcc gggttggggc cgatcgaggc cgcgctgaag ggggccgagg
    33961 agattggttt caccgtggtc tcgatcagcc tgtcattgat cgcagcgttc atcccgctgc
    34021 tgttcatggg cggggtggtc gggcgcctgt tcgccgagtt cgcgctgacc atcaccgtgg
    34081 ccatcctgat ctccatcgtg gcctcgctga cactggcgcc gatgatggcc gcgcacctga
    34141 tgaagcgcat gccggcgcat cgggacagcc aggacacgct ggccgggcgc ctgctggccg
    34201 gctacgaccg cagcctgcaa tgggcgctgg gccacccgcg gctgatactg ctcggcttcg
    34261 gcgccaccgt ggcggtggcc gtggcgtcgt acgtgatgat tcccaagggc ttcttcccgc
    34321 tgcaggacac cgcgttcgtc attgccacca ccgaagcggc acaggacatc ggcttcgagg
    34381 acatggcggc caagcaccag cagctggcga agatcgccgc cgaggacccg gcgttgctgg
    34441 cctacaacca tgcggtgggc gcgaccggtg gcagccagac gctgtccaac ggacgcttct
    34501 ggttcatcct caaggaccgt ggcgaccgcg acgtggacgt gcacgccttc atcgaccgcc
    34561 tgcgcgcgaa gatggccagc gtgcccggca tcaccgtgta catgcgtgcc gcgcaggaca
    34621 tcaacctcgg tgccgggccg tcgcgcaccc agtaccagta cgccctgcgc gggcaggaca
    34681 gccgcgaact gtcgcgctgg gccgaacagc tgaccacgcg cctgcgcggc ctgccgcagc
    34741 tgcgcgacgt gtccaacgac cagcaggtgg gcgccagtgt cacccggctg cagatcgacc
    34801 gcaccgccgc agcgcgcttc ggcctgaccg ccaacgatat cgaccaggtg ctctacgacg
    34861 ccttcggcca gcgccagatc aacgaattcc agaccgacac caaccagtac cgggtgatcc
    34921 tggagatcgc accgggcctg ctcggccagg tcgatgcgct gtcctacttc cacctgcgct
    34981 ctccgctcac cgggcagatg gttccgttgt cggcggtggc acaggtgcag ccgccgggca
    35041 acggtccgct gtcgatcagc cacaatggca tgctgccggc ggtgaacctg tcgttcaacc
    35101 tggcgccggg cgtttcgctg ggcgaggcag taacgctggt cgagcaggca caggcgcaga
    35161 tcggcatgcc tgccagcatc agtggccgtt tccagggcac cgcacaggcg ttccaggagt
    35221 cgctggccag ccagccgatg ctgatcctgg ccgcattgct ggcggtctac atcatcctcg
    35281 gtgtgctcta cgagagtttc gtgcatccac tcaccatcct gtccaccctg ccttcggccg
    35341 gtatcggtgc ggtgctgatg ctgtggctgt ggggcctgga cttctcgatc atggcgctga
    35401 tcggcatcgt gctgctgatc ggcatcgtca agaagaacgg catcctgatg gtcgacttcg
    35461 ccctcgatgc gcaacgcaat cgtgggttga cgccattgca ggccatccac gaagcctgcc
    35521 tgacccgctt ccgcccgatc atgatgacca cgctggcggc attgctcggc gccatcccgc
    35581 tgatgatcgg cttcggtacc ggctcggagc tgcgccagcc actgggcgtg gcggtggtgg
    35641 gtggcctgct gatcagccag gtgctgaccc tgtacagtac cccggtgatc tacctggccc
    35701 tggaccggct gttcctgcag cgccgacgtg agcgcagggc agcggcaggc gccgcgctga
    35761 cggagcccgg atgaaactgc tgatcgtcga ggatgagagc aagaccgccc attacctgcg
    35821 caccgggttg ggcgagcagg gctgggcggt ggatctggcc gccgacggcg tgaccggcct
    35881 gcaccttgcg cgcgagttcg actacgacgt gatcgtgctg gacgtgatgc tgccgggcat
    35941 ggacggcttc aacgtgctgc gcgaactgcg tcgcagcaag cagaccccgg tgatcatgct
    36001 gaccgcgcgt gaccgcgtgg atgatcgcgt gcacgggctg gggcagggcg ccgacgacta
    36061 cctggtcaag ccgttctcgt tcatcgaact gctggcgcgc ctgcaggcgc tggtgcggcg
    36121 tggacgccag caggagccga ccgaactgca ggtgggcgac ctgcaggtca acctgctggc
    36181 acggcgtgcc tatcgtgacg gcgcgcgact ggacctgacc ggcaaggaat tcgcacttct
    36241 ggcgttgctg gcgcagcgac gcggacagat cctgtccaag acggtgattg ccgcccaggt
    36301 ctgggacatc aacttcgaca gcaataccaa cgtggtggaa gtggcgatca agcggctgcg
    36361 cagcaagctc gatggcccgt acccgagcaa gctgctgcac accgtgcgcg gcatgggcta
    36421 cgtgctggaa gtgcgtgacg acgaggacga cggtcgatga ggatgtcgat tgcgcagcgc
    36481 ctgtcggcga tgttcgcgct ggccgcgctg ctggtgttca ccctgctggg catcggcgtg
    36541 tacggcgtgc tggagcggca ggtggtgcgc taccagcatg ccgagctgca gaccaagctg
    36601 catgcggtca gcggcagcgt ggcgatgtgc gatactcgtg aacgctggag caaggtgcgc
    36661 gacaaggtcg gcaacctgat ctccggtgac cgtgacaccc tggtctgggc gtggagtgat
    36721 gacccgacct tccgcatcgg ggcggagcgt ccttcggtgc ggccaccggc caagggcgat
    36781 gcggggatgg ggacgctgca gcgggcaggc gggcatccat tgcgcaccct ttacgagcac
    36841 gtgcctggca agggggtgcg gccggccgtg gatctttgga tcggcatcga ttcggagccc
    36901 tacacccacg cattgcagcg ctttgcgtgg gcgctgtgga tcgccggcgc gctgggcgtg
    36961 ctgctggtgg ccgggctagg ctactggatc gcgcgcctgg ggctggcacc gctgcgcgcg
    37021 ctttccgacg aggcacgctc gctcagtcca caacggctgt cgcagcgcct ggcggccgat
    37081 ggcctgcctg cggaactcgg ccacctgacc ggcgcgttca atggtgcgct ggaccggctg
    37141 gaagcggcct atacccgcct ggatggcttc aacgccgacg tcgcccacga actgcgcacg
    37201 ccgctggcca atctgatggg ccagacccag gtggcgctgt cgcggccgcg cgacaatgcc
    37261 gaacttcagg aggtgatgca gtccaacctg gaagagctgg agcggctgcg tgccatcgtc
    37321 aacgacatgc tgttcctgtc gcgggccggg cagggtgaca ttgccatgga gacgcgagag
    37381 gttgcgctgg ccgaggaagt ggcggccgca ggcgacttcc tcgagctgtt gttcgaggat
    37441 gccgggttga ccctgcacat cgagggcgac gccaccgccc gcatcgatcc ctcgctgttc
    37501 cggcgggcat tgaccaacct gctgcacaac gccgtgcagc atgcgcggcc cggaagcgag
    37561 gtgcgcgtgc agctgcaggc cgaaggcgag ggcgcgcgga tcgcggtgat gaatgagggt
    37621 gcaggcatcg ctgccgagca cctgcccctg ctgttcgagc gcttctaccg cgtggaccag
    37681 gcccgtgagt accggggcga acgccaccac ggcctcggcc tgtcgatcgt caaggccatc
    37741 gccaatctgc atggcggcga cgtgttcgtg gccagccacg aggggctgac cacggtgggg
    37801 ttcacggtgg tgtgctgagg cggcagctca gctgcgctgg ccgtactggt cggcaaacgc
    37861 atcggtggcc cgcaccagcg cgtcgaccgt ggccggctcg ttggcactgt ggcccgaggt
    37921 caccatctcc agccgcgctt ccggccatgc cttggccaga tcccaggcac tgcgcggcgg
    37981 gcagatgatg tcgtagcggc cttgcacgat caccccgggc aggtggcgga tgcggtcgat
    38041 atcgcgcagc agctggttgg cttcaaggaa gatgccgtta cggaagtagt gcgcttcgat
    38101 gcgcgccttc gccagcgtgt ccagcggatc atcggtggat acggcatcca catcgtgctg
    38161 cagggtggcg gcgttgtcct cccagcccag ccacgcctgt gccgcttcga tgcgggtggc
    38221 ttcatcggcg ctgtccaggc gcgtccagta ggcggcgatc atgtcggcgc gctcgccttc
    38281 tggaatatag gcctcgtagc ggtcccagcg ttcggggaag atccagcgcg caccgccgct
    38341 ggcctctgcg aaccagcggt tttcgatctc gcggccgagg aacacgccgc gcacgatcag
    38401 cccggtcgca cgcgcgggat gcgcctgcgc ataggccaac gacagcgttg agccccagga
    38461 gccgccgtag accagccagc gttcgatgcc cagatgctcg cgcaccttct cgatgtcggc
    38521 caccagcgcc tgcgtggtgt tgtcgcgcag ctcgccgaac ggcgtggagc gcccgctgcc
    38581 acgctggtcg atcagcacga tgcggtagcg cgccgggtcg aagaagcggc ggtgggtggg
    38641 tgaaatgccg gcgccggggc cgccgtgcag gtacaccacg ggtattcctt ccggcgtgcc
    38701 gcactcctcg atgtgcaggg tgtgcagatc gctcaccgtc agggtgaact cgcggtaggg
    38761 ctcgatggcc gggtacaggg tacgcatgac gggtgtctca caagcagggc ctgccagcat
    38821 acctcccacc gtggcagcca gcgttggccc cggcctgcct tgcaggcgcc gggtgggccg
    38881 ataggataaa ttgtaggcca ctcacctggg gatcacggtc atggcgggct cagacgtagt
    38941 gcatggcccc gccaggcagg cggtggctgc gcgcctggac gacctgggcc agctgcgccg
    39001 ccgattgctg tacggaggcg gcgcgctgat ctccgcactg gtagtgctga ccgccctggt
    39061 cagtgccatc gccgatgtcg aggagttcca cgcgcgggag cggcattcct tcaacgaggc
    39121 gcgtgccgcc gccgaatact acctgctgca gcgtgatcgc gcctatgcca cctccatcaa
    39181 cggtaatgat gtgctgtggc gtgaccagcg ggccggactg gccgcttccg gtgccggact
    39241 ggccgcccgc ttccacgcgc agggcgaaga agtgctggtt cgctccgaag ggcgtactgc
    39301 ggtgccctgg ctggtgctgg ggctgaagga caagccgctg ccggaacagg aactggccgc
    39361 gtacctgggc atggtggaca tctattcggc ctacaccgcc gattcgatca cttcacagaa
    39421 tgcttccggg ccattgctgg tctatgccta cgagccgcag ggacggctgc tggcggtgtc
    39481 caacatcagc ggtgaatccc agttgctgcg cgcactgggt gtaacgaccc gccagcaggc
    39541 cttcgcgcgg ctgctgggtg aggaaccgcg gttccgccag gcaaccgtgc gtcccgggcc
    39601 catccgtgaa gccgcgcgcg aggggcgcct gatgtcgcgc tatggcatca atccgttcac
    39661 cggtcagccg tcgctgatcg gcatggtcac cctggccgaa ggcaccactc cgtacttccg
    39721 gcgcgtggtg tttgaatctg tcggcaacat caaggctcag ctggaagcgc gcgagcaggg
    39781 tcgctacctg gtcagcacgg cagagcggca ggtggtgctc agtaccggcg gcctgtccaa
    39841 ccgggagcag gatctgttga tgaggctcgc gccaagcgac acggcgcgcg cagggagaca
    39901 gccgccgcga cggtacagcc aggggtcgtt cgtactggcc agcgggctgc caggcgtcga
    39961 gtggaccctg agccatgtgt acggctggtc cgatatctgg cgcagccagg gcgcctacct
    40021 gctggcccgt gcgctcagtg cgctgctgat catcagtctg ctgtggtggc tgctgcggcg
    40081 catcgaccgg cgtgtgttca ccccggcgct ggccgatgct tcgcgggtgt acgagagtga
    40141 ggcgctgagc cgggtcatca tcgggacggc accggtcgga ctggtcctgc tggccaggga
    40201 cagcggtgag ccgctgttgc agaacgacgc agcgcgtcaa ttggttgaga ctgtacgcac
    40261 ggccggcgaa gtcgcgtcgc cgccactgta cctgcgcctt gccgaagtgg gccgcaatgc
    40321 gcgcatcgat gaagtactgg aactgcagtg gtctcccgcc gaatcgggca ccgccaccca
    40381 gcttcagatc agcatggcgc aggcgacata tgacgaacag ccggtgtggg tctgcgcact
    40441 gcgggatgtc accgcccagg tcgaactgga ggacaacctg cgccgcgcac gcgagaattc
    40501 cgaagccgca cgccagtcag ccgagtcggc caaccgggcc aagtccgctt tcgtggccac
    40561 catgagccat gagatccgca cgccgctcaa tggcgtgctg ggccatctgg aactgctggc
    40621 ccgttcgccg ctgcagccga gccaacgcga gcggttggac cgcatccgct tctcggctga
    40681 tgctctgatg cacatcatca ctgacgtgct ggacttctcc aagatcgagg cgggccagtt
    40741 ggatgtggag cgtgtgccgt tcgcgctgcg cccgctgatc gaaggcgtgg cgctgctgtt
    40801 cgcgcccgat gcgctgcgca agggggtgca gctgtgcctc accgtggaag ctgccaacaa
    40861 tcagctctat gtgggcgatg cccatcgcat tcggcagatc ctcaacaacc tggtgggcaa
    40921 cgcggtcaag ttcaccgatt ccgggcgcat cctgctgcgg gcagaactgc accactcggc
    40981 ggggcagggt actcagctgc gcgtgcaggt catcgactcc ggcatcggca tgagcccgga
    41041 acagaccgcg cagctgttcc agccgttcca gcaggccgat gccagcgttt cgcgccgtta
    41101 cggtggcagc gggcttggcc tggcgctgtg ccagcagatc gcccgggcca tgggcgggca
    41161 ggtgtcggtg gaaagcaccg aaggcgtcgg cagcagcttc accctgcggc tgccaatgca
    41221 ggtgcaggca ttgcagcctc cgcccccgca gccgctgcgt ggccggcggg tgaccgtgtt
    41281 gtcgagcacg ccggaatggc gggccgagat ggagcgcctg ctggtggcgt ggggggcgac
    41341 cgccgccgtg ctcgaccgcc cgcagaacga cgacgagggc ggcgatgcgc tgctgatcgt
    41401 gggcgaccac cgcgcatgga gcatcgacga agagcagcag ctgatgcagg gctacgcgcg
    41461 caccgtgcat gcccatgcac agggcccgct cagcgcggaa acccgcggcg accgcatcga
    41521 agtcagcagc tacgtcagcg aggccgtgct tgaggcactg gcacccggcg aaagagcggg
    41581 ggggcacgtg gcggtggtga agcctgtacg agcaacggcc gcccgcgggc gcgtactgct
    41641 ggtggaggac aacgcggtga accgcgagct gatccagcag cagctggagg agatcggttt
    41701 cgccgtggac gctgccggca atggtgcgga ggcgttggaa ctgtggaagg acggtcacta
    41761 ccgtgcggtg ctgaccgaca tcaacatgcc ggtgatggat ggctatgccc tggcccgtga
    41821 tctgcgtcag cgcggccagt cgctgccgat cctggcgatc accgccacgg cgctggccag
    41881 tgaacgcgag cgctgccttg ctgccggcat cgatgatctg ttgctgaagc ctttcaacct
    41941 ggaccggctt gaggttgccc tggcccgcac caacgctcca gcggaccacg tacgcggcca
    42001 gcagcgggag gcggggcccg ctgcggtgcc ggtgcctcgc gacattcccg caggcatccg
    42061 ccggattttt gttgatactg gcgaccagga tcttcaggcc atcctcgatg cacgcgccaa
    42121 cggggacact gcagcgcttc tggagcgtgt gcacggattc aagggggcgt tgcagatgat
    42181 gggcgagcag gcgctggccg agcagtgcgg cgagatcgag agtgcgttgc gccaaggtgc
    42241 gagcgccagc gatgaggcct tggatgtact gcagctggct ctcagcgccc gcctggagga
    42301 ctatcgccgc gatctggacg catccttgta agatgcagtg gtgagggcat ggcgtatcga
    42361 tgccggtggc cagtcacgaa tcggagccga gcatggctcg gctccacagt agatccacgc
    42421 catgcgtgga tgccgttcag aaatccatcg tcgccgacac caacaccgtt ctcggcgcgc
    42481 ccaacgccag gctcgacaac aacggcatgc cccagtacgc cttgttggtc acgttgttca
    42541 cgctggcgcg caacgccagc ggccggcccg ccatcgtggt gctgtagcgc gcacccacgt
    42601 cgaacaacgt acgccccggc accgacaggc ggttgtcggc actgatgtac tgcttcgaca
    42661 tcgcggtggc attgccggtc agggtcaagc cctccagcgc cggcacatcc cattccacgc
    42721 ccagcttggc ctggcgctgt gccaccgcag tcgcaatgcg gccttcattg acgccgcctg
    42781 cggtgcgggt cagcatgggt tgcacgtagg ccacgccacc catcagtcgc agaccatcca
    42841 gcggtgcgcc gaagaagccc cattccacgc cccggttccg ctgctcgcca ccgaacgaga
    42901 agatattcgt gaccggatcg gtgtagctgc ttggtcgctt gatctcatat acggcgaagg
    42961 tgtgcgcgaa gcggcccagg tccagcttca ggcccagctc tttctgcttg gtgcggaatg
    43021 gggcgaacac atcgccggca ttggcggcgg tcatcggcgc ggtggcaccc tggctgaggc
    43081 cctcgatgta gttggtgtag agcgaaacct tgtcggtggc cttcaccagc agtgcgaagg
    43141 ccggggtggt ggcactctcg tcgtagcgcg aggtgcgcgc gccggtggcc acgctgaagg
    43201 tttcgctcag cacctgctgg cggcgcacgc ccatggtcag ctgcacgcgg tcatcggcga
    43261 aggacagggt gtcggcgaag ccgatgctgt ccagcttcag ctcggtgtgc gaaatgtgcg
    43321 gcgccacgaa cggcgccgcc gggccccaca ccgggttgta caggttggtg gtccagtccc
    43381 agccgggcac gctgcggcgg ccgtagtcgt tctgggtgtg ctggtagtgg gtcacgttgg
    43441 cggcccactg gtggccgacg ctgccggtgt ggaagcggcc gcgcaggccg gcatcaccgg
    43501 actgtttctt gatatcgaac gcgagctggc cgatcaccgt ggtgaagtcg ccggccgggt
    43561 tcagcacctg cgcgctgatc gaaccgttgt agcggtagtc ggtcttgctg gtgccgtagg
    43621 ccaggtaggc catcaggttg tcgttgatgt ccagttcgcc gcgcagcatt gcgcccttgt
    43681 cctggctgtc gacgtaggcc cagtccgggt tgatcagggt atcgccacgc ggcggtcgcg
    43741 gaatggccac gcccggtgcc aggccgacgc cacgggccgg gccatcgacg cggtcgtcgg
    43801 cgctgtacag atcggcggat acccgcgcgc gctcgccgcg ccaatccagt gccagcgcgc
    43861 ccagctgcac cttcttgctc tgcttgccca cggcaccgtc gccatcacgg taggcaccgt
    43921 tgaaacggat gccgaactgc ttgtcggcgc ccagccggcg gccgaggtcc acgtgcgtgc
    43981 cgaactgcgc atcggaagcg aagttggcgc tgacccgcaa cagtggttgc tcgcccgcgc
    44041 gcttgggcac caggttgacg ctgccgccaa ccgagccgcc cggcggcatg ccgttgagca
    44101 gtgcggacgg gcccttcagc acctcgatgc gctcgaacat ctccggcgag gtgcggtagt
    44161 acggcgccat gccgctgagg ccgttgaagg tggtgtcgct ggtgctggag gcaaagccgc
    44221 ggatcgaata gttctcgctc cacgaaccgg tcacgccgtt gctgaacacc gtggggtcgg
    44281 tcgccgcgat gacgtcggtc aggtccctgg cctggcggtc gcggatgaac gcctcggtat
    44341 agctgacggt gctgaacggc gtgtccatga agtccttgtc gccgagcagg ccgacgcggt
    44401 tgccggaggc tacctggccg ccggcatagt cgccggttac ccggcgctgt tcctgcacct
    44461 gcaccgaggg cagggtggac ggcgccgagt ccgccagcgc agcgaacgag gccagcaggc
    44521 ccagcgccag ggccgacacg cggtagcgcc gggcagtgcc cggcagatgc atcgacacgc
    44581 gggaaccacc cccggccgga cgaaggatcg aagaacgaac gaactgcacg gtcatgccag
    44641 attcctgtga atcgcaggtg cgaacgcgcc tggcgcgctg ccatcggcaa gcacggggag
    44701 agggcgcagc gcagggttgt cggctgggtg gggacctggc gggaagtgag ccacgggctc
    44761 gattccggcg tgcgtcgtgg ttgcgaacca gacgcattcc gaattagttg agtaaattaa
    44821 actaaattgc agggtgcgga caagagggtc catttgctgg cacgctcact acggtatgaa
    44881 catgcacacc gagatcccgg cgccggcccg tggccgcccg cccaccatca cccccgatcg
    44941 cctggccgac atcggcatca agctgggcct gccgaacctg accatggcca acgtggccgc
    45001 cgaactggcg gtgagccagg ctgcgctcta caagcgcgtg gccaacctgg aggcgctgaa
    45061 gcggctggta gccgataccg tgttccagcg ctggcagatt ccgcgcgcct cggccgacgc
    45121 accgggtggg ctggaggcct atctgatggg tttcgtggca tcgctgtgcg aagtggtgaa
    45181 ggcccacccc gggctgccgc cgtacctgct gcgccgcgcg gtggcgaccg cgccgatgct
    45241 ggacaagatc gcctcgcacc aggcgcatgt ggccgaagtg ttcggcctgc cgctggacaa
    45301 ggcgcgctgg ctgctggcca cgattgcgtt ctactgcatt gccggtgccg acacgatcta
    45361 cgcgattgcc gatgacgaag aggggcaggt gatcaccgag ttcaggcagg ggatgcgtgc
    45421 gctggtgatc ggttcgctgg aggtgctgca gcttcgctag atccacgcca tgcgtggacg
    45481 ccattacacg gttcgccacg gccccatcca cgcatggcgt ggatctacaa tgcgaccatg
    45541 cctgccacgc ccaccctcga tgatctgcgc cgctacgcgg tggcgcgcac gttgttcaaa
    45601 cccaccacgc tgctgagcgc gatccgccgc ctcggcttcg tgcaggccga cccgatccgt
    45661 gcgccggcac gcgcgcagga tctgaccctg cgccatcggg tgaaggacta tcgcgccggt
    45721 gatctggagc ggcgctatgc gcgcctgccg gtggaggagg attgcctggt gaactacggc
    45781 ttcctgccac gcgagcacct ggcgctgatg catccgcgtg tgtccaggcg cgcgtgggac
    45841 gccgaaacgc agcgccgcgc ggcggacgtg ctggccttcg tgcgcgagcg tggcagcgtg
    45901 cacccgcgcg aggtggacca ggccttcgcg catggccggg tgaccaacta ctggggcggc
    45961 accagcaatg ccagcaccca cctgctggat ggcatgcact accgcggcct gctgcgcgtg
    46021 cagcggcgtg acagcggcac gcgcatctat gcggtggccg accacaccga agccgatgcc
    46081 agcgaacagg cgcagatcga gcgcgccgcc gccctgatcg acctggtggt gcgcaagtac
    46141 gcgccgttgc cttcggccag cctgacctac ctggtgcgac tgctgggcta tggcgcaccg
    46201 catctggccg agcagacccg caaggcattg gcgctggcca ggcagcagct ggccagctgc
    46261 acgctggagg gcaccacctg gtactggccg gcggatgaga atccgcgctc gcgccgccat
    46321 gcgccggacg agcaggtgcg cctgctggcg ccgttcgacc cggtggtctg ggaccgccgc
    46381 cgcttcgagc tgctgtggca gtgggtctac aagttcgagg cgtatacgcc tgcgccgaag
    46441 cgccagtacg gctattacgc actgccggtg ctgtggcacg accaggtggt gggctgggcc
    46501 aatctcagcg tgcgcgacgg tgagctggca tcgagcgtgg gctatgccgg caggtcgctg
    46561 gcccgcgaca aggtgtttcg tggcgcgctg gacgacgagc tgcagcgcat ggccgcgttc
    46621 ctgtagcgtc cgggcattcg tgcccaccaa ggtgggcacc taccgaagca attccaaact
    46681 agtctggtgg gcatctaccg atatcgtcgt gcatgcgcca ccatcgccaa caccactacg
    46741 ccggcggcca cgctggtgtg gccggatagt gcggccagac cagatcccac ccccagcccg
    46801 cgcatcgcga atacggtgct gaacaccagc agcgcccacc ccatggcccg cagctgctgg
    46861 gtcgcttgcg cgctcagcac gcgacgcacc acgtcccgct gatggcgttc cattgacagt
    46921 gcaaggcagg cgaacgccgc cactgacaac acgaatagaa tgaggtggat catgcgccgg
    46981 cctccggtac cgcattgcgt gacgctgcag acggccgtgc gcgcttcgcc tttggcgcat
    47041 gccgccaggt gcgccaagcc agcaatgagt gcagggcggc caatgccagc agggtcaggt
    47101 cggtcccggc aaacgcccaa tcgcccatcg ccagcgcgtg ccacagtggg tgcgaggtgg
    47161 tcatcgcagt cagtactggc aacagcgcca gcagcagtgc cgccagcagg aactgttcga
    47221 tccacgcgcg cttcggtgta cgcagcgtgg cgtgcacgaa catggctgcc caggccagga
    47281 agaacagatg cacctcccag gccgcgcgac tgtccatggt gacgggcagc aggcggttgg
    47341 cccacaggta ggcggccatc gccaccgaca ggccggcgac ggtggcgatg ttgagccgct
    47401 cgaccaggcg gaaaccgaag tagggccgtt gcggatcggg cagctgcgcg cgtcgcttga
    47461 ccgtccacag gaccagcccg gtgccgacca tggcggtgcc ggccaggctg acgatgaagt
    47521 acagccagcg cagggcggca tcggcgaagc ggcccaggtg caggccatac agcacgccct
    47581 gggtatcggc ggcgacgcct gagtgttcct tgatctgcag cagctgccca tcgctgccgt
    47641 cgaacagcag gtagttcggg gtggtggaaa cacggctgga ctgcgcgcgc accacggcca
    47701 cgcgtgcgtt ctcgtcgccg ggattctgca cctgcacgct gcctgcagcg ccagtgcccc
    47761 agcgctgctc ggcctgttgc accagcgcac cgacgtgggt gagcggagca ggctggcctg
    47821 ctgccttctg cggcggcagg aacaggcgca tctcgctgat cacttcggcc tgttggcgtt
    47881 tgtccggcag tttggccagg ccccacggca tgtacagcac cgccagcatc accagcccgc
    47941 tccaggtgat catgaaatgg aagggcaggc cgagcaccga gaccgcggcg tgaccgtcca
    48001 gccacgagcg ctggcccttg ccccagcgga aggtgaagaa gtcggcgaag atcttcttgt
    48061 gggtgatcac gccgctgacg atggccacca gcatgaacat cgcacacagg ccgacgatcc
    48121 agcggcccca catggccggc atgtagtgca ggttgaagtg gaaggcgtag aagaagtcgc
    48181 caccacccgt atcgcgggcc tgcagcggtg caccggtgct ggcatcgaac aggcccgagt
    48241 cgaaaccgtg gcggccacgt ccgccagggc tggcccacat cgccgacacc catggcatgc
    48301 gctggctggg caggctgagg ttgatctggc tggctgcagg tgtgtcggcc atgatcgccg
    48361 tgacggtacg ctgcgcgacc gcagccgcgt ccggcaacgt agacggtgtg gcgatttccg
    48421 gccgggtgta gcgcgagagc tcgtcgcgga agtagctggc ggtgccggtg aggaacatcg
    48481 cgtacaggat ccagccggcc agcagcccca cccagatatg caggtcggac atggtctggc
    48541 ggataccgcg tggcttcggg gagcgatcga cctggctcat gccccgcctc cgtcgccaac
    48601 cgtttgtgcg atcaaccaca gcggcaacgc ggcgatgacc aggcccagcc acgcacgcca
    48661 tgccgagcgc actgcgaata cccagaccac ggcgccggca tacagcagga agctggcaag
    48721 catgccggtg aacacggctt ggcggccatc gatgggcagc gccagcgcgg cgatgctgca
    48781 cagggcagcc aaggcatagc caccgaacag cgcggcgagg atgcgtgaga ccagcggcag
    48841 ccaggccagc acggaagcgg tacgggaaac gctcacatca gttctccggg gcgccctgcg
    48901 cgatggcggg gcgcccgtgt atcaggcatc agaaatcgac ggtggccgac agcagcgcgg
    48961 tgcgcggcgt gcccagcccg gagccgaggc tgccggccca gtacgccttg ttggtgaggt
    49021 tctgcacgct ggcacgcagc accagcgggt gaccggcggc ctgcagtgca tagcgggcgc
    49081 cgaggtcgaa cacggtgcgg cccgccaccc actggctgtt gtctgcgttg atgtagccct
    49141 tggacaggct gactgcattg ccggtgaggg tgaggccggc cacggcgggc acatcccatt
    49201 ccacgcccag tttgccctgc cactgcgggg tggcggtggc caggcggccc tggttgatgc
    49261 cgccctgggt gcgggtcagc ttcggctgca gccagccgat gccgccgagc acgcgcagct
    49321 gttcggtggc ctggccgaac acggtccatt ccacgccacg gttgcgttgc tggccgccgg
    49381 acgagaacac gttggtggcc gggtcggtgt aggcgccggg cttctcgatc tcgtacacgc
    49441 tcagcacact ggccaggcga ccgaagtcaa ccttggcacc gacctcgcgc tggcgcgtct
    49501 tgtacggcgg gaacacgtcg ccagcgttgg cggcggtggc cggggcggtg ctgccctggc
    49561 tcaggccttc gatgtagttg gcatacagcg acaggcgatc gttggccttg aacagcagtg
    49621 caccggccgg agtattggcg ctggcgtcgt agcgtgcagt gcgcttgccg gtgctgccat
    49681 cgaaggtatc gctgagtacg gtctggtgac ggatgcccag ggtcagctgt acgcgatcat
    49741 cgatgaagga cagcgtatcg gcgatgccca cgctggtggt gcgcacttcc gcggtcttcg
    49801 gcagcgacgc atcactgaag cttcgatcaa tggccgggcc ccactgcggg ttgtagatgt
    49861 tggtcaccca atccctggcc agcaggttgc gcttgaagcc gaatttctgg tcgtgctggt
    49921 accacgctgc actgatcgcc agtgcatgat cgaccgcacc ggtgcggaac cgtgccgaga
    49981 ggccggcttc ggcggtgtcc ttgctgtaga tgaagcgctg gtgggcgaag ttgttgcgga
    50041 agtcgccggc tgcgttggtg atcagcgtgg tggcgctggc gatggagtcg aaatcggtgt
    50101 ggccgtgccc gtaactggca tgcgcctgca ggtggtggtt gatgtcgaac gaccagcgca
    50161 gcgcggcggc ctggtccttg acggtgctga aggtccagtc cggtgcgaac agggtgctgg
    50221 cctccggcgg tcggggcacc gccaggccgg gcgacagcga cacgccacgg ttgaggccat
    50281 ccacatggtc gcggctgctg agcaggtcca gcgacacctg cgagcgctca ccacgccagt
    50341 ccaggccgag cgaggccagc tgcgttttgt gctgctggtg gtcggtggca gtgtcgccgt
    50401 cgcggtgcac ggcattgagg cgcacgccga actgcttgcc cgcgccaaag cggcggccga
    50461 catccagatg accgccccac tgcgtgtcgc tgccataact ggcagtgaag cgggtcaacg
    50521 gcgtgtcgcc agcacgcttg ggcaccaggt tcaccgcacc gcccaccgag ccgcccggcg
    50581 gcatgccgtt gagcagcgcg gacgggccct tcagcacctc gatgctctcg gccagctccg
    50641 gggtgacgcg gtagtaggga atcagcccgt agaggccacc gaatccgata tccgacgagg
    50701 cgacaccgaa accgcggatg ttgaagtagt cggtgatgcc accactggac ccactgctgt
    50761 agacgctggg gtcggtcagc gcgatcaccc gtaccaggtc cggcgcctgg atgttgtcga
    50821 tgaattcggc ggtgtagcgg gtggtgttga acggcgtgtc catgaagtcg agctcgccga
    50881 gcaggccgac gcggctgccg cgcgtgacct ggccacccgc ataggcatcg gcgggtgcgg
    50941 ccttgtcggc gcgtacgttc acggtgggca actggcgggc gccatcgggt gcatcgttgg
    51001 catgggcggc ggtggcgatc aacagggtgg gcagcaacgc tgcacgtgcg gccacggaca
    51061 gcgcggagcg gcgtgggaga ggcagggttc gcagggggag ggacatggcg gttctcgtgt
    51121 ggtgggtcgt gcgatcggcc agcacgacgc cgtcggtgac ctgcaggggc aggacgacgc
    51181 gggctgtgga atggctggca gagggcacgg cgctgccgct ggggcagtgc tgcacgcgag
    51241 gtgcatgggc gatctgtggc tgggtggaac gaagcgcgtg gcgcggatgc tgtcgtgtgg
    51301 atcagatatc gtcggcgagg tcgtcgaggt cctgcaggcc accgccgcgc gccagcacgc
    51361 gctcgtagtt gcggcggcga cgccggtcgg tttcggtggt ggtctcgcca cgcttccagt
    51421 agccggcaac ggcaacatcg gtgcgtggca ggccgaccgt ttcgatgaag tggcggcgca
    51481 gggcgcgcat ttcctcgcgc tcgccggctg cccagaccgt gctgccaggc tgcggctgct
    51541 gttggcgcgc gtgctgcagc aggggtgcgt caccggtggc aaggcgatgc acgcagacac
    51601 cgtcggggtg cggcagctcg tctaccggga aagcatcctc cgagctgacc caggcctgcg
    51661 cacgctgacc gacaggccac tgctgcagca gggcaaacag ggctgggatg gcgctctggt
    51721 ctgcgaacag cagcgcgcag gtgccttcgc gctgcggcac ctggagatgg gggcgcggcc
    51781 cggtcagatc gaaggcatca ccggggcgca gcgcacgtac ccacgccagc atcggccccg
    51841 gcgcctcgtg cagcactacg tccagggtga actggcgggt ggcggcatcg acgctgcgca
    51901 cggtgtagat ccgtgacaca tcgccgaacc cggcgcccag ctggatgcgc accgcggtgt
    51961 tggcacgctg ccatggcgca agttctgcgt gttccggcag ctggaccaga aggcgcagca
    52021 ggctggcgca cggctgcaca accgcgacca cctggacctg cagcgcctgc aggccgcgat
    52081 catggtcggc gctgcgcagc ggcccggccg gggtgattga agtgggggac gcggacatcg
    52141 acaacgatcc tggacactgc agatgcgaat tagttacatc atagtaaact aaattgatcg
    52201 cactgcaacc cgggcctgtc cgaaggacac gcgacgcgtt gaccactgcg tggcggcgga
    52261 ccaccatgac aggccttgcc cgcgcatcac gcaggaaccc ttaccgcatg gctgcaccaa
    52321 aaaaaaccgc ctcccgtggg cgaccgccca gcatcacccg cgagcgcatc gccgacgccg
    52381 gcattgccat gacgctgccg ggactgagct tcgtcggcgt ggcggcggca ctgggtgtca
    52441 gccatatcgc gctgtacaag catgtggcga atctggcggc actgcgcgag ctggtggccg
    52501 aggcgatctt cgagcgttgg caggcaccgg cgctggatgc cgctgggcag cgcagcatcg
    52561 tggaggatct gcgtgcgttc cagcgctcat tgcgggcgct ggtggatgac aatccgggcc
    52621 tggccccgtt cctggtcagc cacggcgcga agacgccgga gatgctggcg cgtatccagc
    52681 gccaccatgc cgaattcagt cgcgtgcatg gcctgccgct ggaacaggcg gcatggctgc
    52741 tgtcgaccgt ggcctatcac gccgtggcgc tggccgacac cgtgtattcc cggcatgcgc
    52801 tggtggatgc cacgcgtcgg accttggatc ggaaggcaca gcaggccgag ttcgaccgca
    52861 gcatggaagc attgatcatc ggagcattgg cgatgtgcgg gcgcatggca gcccctgggt
    52921 aacgctcatt ccaggtgggc agctaccggt catgctccgc atcctccatg cccgggctga
    52981 cccgacgacc gatgtccttc aagcgcgcca gctggtccac catcgacggc gcatcatcca
    53041 ggctgccgac gaacgtccac aggtaggtca tcactgcgta cacatggccc ggggtcaccc
    53101 cgtcggtggt ggcgaggcgg ccgatggtca gcgcgaacag caccgcggcg gctgcgccga
    53161 ccaccacgaa ggcgcccgct tcgcggtcgg acaacaggat gcgcagtcgc gacagcgtgg
    53221 tgtagtggcg gcgcagcacc gaggggctga cccggtcgac caggcggatt tcatgttcca
    53281 gccggttgtt caggcgccca tgcagctgct cgttgcggcg cgcgaatgac ggcagcagca
    53341 acagtgcgcc cagcagggcg accaggcttg cagcgcccac tacgggttcg atcgccagca
    53401 gcatcgcggc cgcgccgaac atcgacacca gcgcggtggc gatgatcggc acgtgcttct
    53461 cgaagaagtc gacgaactcg cgcgccagca ccacgcgtgc ggcggaagtg gaggtcgcct
    53521 ggccgagacg ccgctgcgcc tgcaccacat tcactgccag gtcggcatag atgcgggtga
    53581 aggtgcgcgt atccactgca cggcgggcgg caccgaccag ccagaacaac agcaccacgc
    53641 cggcatagga gatggcgtgg ccgatgtcgc cgcggatgat cgcgtccacc gcgaagccgg
    53701 caaacagggg gtaggccagc agcagcgcgt tctccagcgc gaccagcgag aaggtgccgg
    53761 tgagctgcca gggataggtg cgcaggatcg ctttcagggt ggcggccgca ttctgctggc
    53821 cgatgctgcc ggcggcagcc gccggatcgt gggggtgttt catcgggatg cctggagggg
    53881 acggagacaa ggcaggggat ggatgcctgc catctccccg gtcatgccca gtatcggcag
    53941 ccgtttggag cgggcatgga gggacgatgg agatcgcgtg gagacaaccg cggtgttcag
    54001 cggagggcgt ggtgcccacc agggtgggcc gctacgaggg cttcaccgcc gcgcgtgcac
    54061 cggccagcgc agttcgaacg aactgccgcc acgctcggtg gcgcggcagc gcgccgttcc
    54121 gtgatgggcc acggcaatcg cgcgcaccac ggccaggccc agcccggagc caccgctctg
    54181 ccgtgaacgt gagacgtcgg tgcgctggaa cgcttcgaag atgctgtcgc gcagttcatc
    54241 cggcacaccc ggtccgccgt cttccacggc cacggtgcaa tgcccttcgg ccagcaagac
    54301 gcgcacccgc agcgggcagg gaatggcatg gcggcgtgcg ttttccagca gcgccagcac
    54361 cgcctggcgg atgcgcgccg gatcacagtc ggccagtgcc gggcgcgcct ccagcgtcac
    54421 cgagaagcca ctctcggtga gtgcctcgga catggcttcg accaccgccg ccacctgcac
    54481 gctgacatcg ctgcgctgca gccgcaggtc caggtggccg ctctcggcca ggctgaccac
    54541 gcgcaggtcc tcgatgatgc gggtcagacc ctcgagctgg gtgagcatgc tgttgaactg
    54601 ttccggcccc ggttcgaaca cgccctcggc gatgccctgc aggcggccgc gcaggatggt
    54661 catcggtgta cgcagttcgt gcgcgatcgc tgcgttccag aacacccggt tctcggacat
    54721 gcggctgagg cgctcggcca tcgagttgaa atcgctgacc agcgtggccg cttcggccat
    54781 cgtggtgcca ccgccgcgcg cacgcgcgtc cagatcgccg ctggccaccc ggcgcaggct
    54841 ctcggccacc gaattcaatg gggtgatgat gcgccgggtc aggcgcgagg cgaccagcgt
    54901 ggcgaagatg acgaccacgc tggcggtcag gccgatccac agccattcca ggccggacgg
    54961 catgatggtt tccggctggt cataccagcg cggatagaac acctccatca ggtagtagaa
    55021 caggtagaaa ccactgatcg acagcaccgt cgaacacagc gaggcgaccg tgatggacag
    55081 cgtgatctgg cgtccgatgc tcttgccttt ggggttcatc attcagtcca ggaagcggta
    55141 gccgacgccg cggatggtgg cgggaatgcc gatcacgccc acctcctcca gcttgcgccg
    55201 cagtttgctg acatgactgt cgacggtgcg ttcctgggta tcgccttcgg gcaggcaggc
    55261 atgcagcagg tccacccgcg catgcacctg ccggggcgcg cgggccatgt gcaccagcag
    55321 gcggaactcg gtgagggtga aggtcagtgc atgcagctgg tcgccgctgc gcacggtcac
    55381 ctcgtggctg cgcaggtcga tctcgaacgg cccctgccgg atcagcccat tgggttcttc
    55441 ggccaccgtc ctggcactgc ggcgcagtac ggcctggatg cgtgccacga tctcggccgg
    55501 attgaacggc ttggctacgt agtcgtcggc gcccacgcgc aggccggtca acttgtccac
    55561 atcctggtcc agcgcggtga gcatgatcac cggggtgttg ccccgccggc gcagttcgct
    55621 cagtacctgc cagccatcca gccgcggcat ctgcacgtcc agcagcacca ggtccgggcg
    55681 cagctggcgg tgggcggcga gggcggcttc gccgtcggcg gcacgggcgc tgcgcaggcc
    55741 ggaacggtcg aggtaggcgc ccaggatgtc ggcgatctcg ccttcatcct cggcaatcag
    55801 caccagcggt ggctggcggg tacggagggc gtgtttcatt gcgtgatgcg cagcgttgcg
    55861 gtggcggcca gtcggcgagg ccgacgaggc tagcggccgt tgatggagac tcggtcgaga
    55921 ttgtgtcgag atttcatgga cacgcgcggc gacgttcagc tgcgggccgc ctgcctgaac
    55981 ggcggcgccc tctccacgca atctccatgc tggctgcaga agacgtccac acgcggccac
    56041 cagactgggg gctcagcggt cgcaccgggc gactgcgtgc aactgggcgt ttcgatgagc
    56101 aaccgcagga cctggatcag tgttgccgcc gtggccgcgt tggctgccgg cgccgccgcg
    56161 tgggtactcg ccgagggcga cgaggccgcg ctgatcaccg caccggcccg ggtggccgat
    56221 ctggaaaaga ccgtgcaggc ggtgggtcgg gtcaatccca aggagctggt ggcggtaggc
    56281 gcgcaggtgt ccgggcaggt caagcgcctg catgtggtgc tgggccagcg cgtgcaggcc
    56341 ggcgacctga ttgccgaggt cgattcacaa ccacagcgca tcgcgctgcg cagcgccgag
    56401 gccgccacca gtacgctgcg cgcccagcac accgccagcc aggcccgcta cgtgcaggcc
    56461 agccgtgtgt tcgagcggca gtcgcagctg gtggcgtcgc ggctggtctc gcaggaaggt
    56521 tttgaaaccg cacgggtggc ccgtgatgcc gcccgcgccg acgtggctgc gctgcaggcg
    56581 cagatcgacc aggcgctgac ccaggtggaa accgcacgga tcaacctggg ttacacccgc
    56641 atcgtttcgc ccactgacgg ctacatcgtg gcgattgtca ccaaggccgg gcagacgctg
    56701 aattcgatgc agaccacccc gaccatcgtg atgctggcgc agatggacac gatgaccgta
    56761 cgtgccgaga tcgccgaggc cgatgtggaa ctggtggcgc cagggcagcc gttgtggttc
    56821 tcgacactgg ggccgagtgg acgccgctat gaatcccacc tgcagcagct tgagccggcg
    56881 ccgtcttcga ttgccgaggc ggccaccggc gctgcgggcg gctctgcaca gacgccgaaa
    56941 gcggtgtact acgccggcct gtttgatgtg gccaacccgg gcctggcgct gaagccgtcg
    57001 atgacggtga aggtgaccct gcagctggcg cgggtggcca atgcgttgca ggtgccgctg
    57061 acggcgctga ccgagtcgga cgacacacag ggccagcgcg ccaccgtgca ggtggtcgat
    57121 gccaaggggc gcgcccgcga acgtgcggtg accaccggcc tgcgcaccgc cactgccgtg
    57181 cagatcctga ccggcctgcg cgagggcgag aacgtggtgg tcggccaggc gcccagcggc
    57241 gccgacgccg agccgaccag cctgctgggg atgtgagcat ggccgacgca ctgctggaac
    57301 tgcgcggggt gtcgcgcgcc tatcgctccg ccgccggtga ggtggtggtg ctgaaggacg
    57361 tttcgttgcg catcgatgcc ggcgagttca tcgccatcat cggcccgtcg gggtccggca
    57421 aatccacgtt gatgaacatc ctcggctgcc tcgaccggcc gaccgagggc agctaccggg
    57481 tgaacggcga ggccaccgag cagatggcgc cggatgcgct ggcacggctg cgccgcgagc
    57541 atttcggttt catcttccag cgttacaacc tgatggagaa cctgagcgcc accgagaacg
    57601 tggcgctgcc ggcggtgtat gccggcgtgg atgcagctac acgcactgcc cgtgcacgca
    57661 cgctgctgga aacactgggg ctgggcgagc gcaccgcgaa ccggccgagc cagctgtccg
    57721 gcggccagca gcagcgcgtg tccatcgcgc gttcgctgat gaacggcggc gccatcgtgc
    57781 tggccgatga gccgaccggt gcgctggacc atgccagtgg ccagcaggtg atggccgagc
    57841 tgaagcgcct gcacgcgcag ggccatacgg tgattctggt gacgcacgac gccgcgattg
    57901 cggccaacgc cgcgcgggtg atcgagatcg ccgatggccg ggtggtggcc gaccggggcg
    57961 aacgcaggac gcaggccgcg gattccgcag gtgcatccga acacgaaact gcgtcgcgtg
    58021 ccgaacgccg cgcacgggtg gacgcagtgc gcgaagcggc gcggatggcc gtgcgttcaa
    58081 tgctggccca tcgcctgcgc acgttgctga ccatgcttgg catcatcatc ggcgtggctg
    58141 cggtggtgac cgtggtggcg ctgggcaagg gcgcgcaggc gcaggtggag tcgcagatca
    58201 acgagctggg cgccagcacg ctggagatct accccggcgc cgatttcggc gacccgcgct
    58261 cggcggagat cgagacgttg gtggtgggcg acgccgacca tctggccgca ttgagttacg
    58321 tggacagtgt cagccccaac ctgagcggat cggtggcggc gttgcagggc agccgtcgcg
    58381 ccaataccca ggtgctgggc gtaggcgcgg atctgccgcg cgtgcgcggt ctgcggctga
    58441 aggccgggcg cttcttcagc gctgcagaag tggacgcgca tcgcgccgtg ggcgtggtcg
    58501 accagaaggc agcgaaggca ctgttcgccg gtagcccgat cggcagcacg gtgctgctgg
    58561 gcggcatgcc ggtggaggtg atcggcgtgg tgggtgccag tgcctttgcc ggcggcgcaa
    58621 cgcccacggt ctacgtgccg tacacctcgg ccgcctcgcg gctgctgggc agccagcgcc
    58681 tggagagcat caccgtgcgc gtccgcgaca atgtgccgac caacgccgcc gaggcctcgc
    58741 tggcggccga gctgcaacgc ctgcatgggc gccgcgactt cttcatctac aacgctgacc
    58801 agatccgcaa ggcggtgatg aagtccagcc agaccatggc cgcactggt
//
LOCUS       DAOKIP010000007        50346 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.007,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000007 DAOKIP010000000
VERSION     DAOKIP010000007.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 50346)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 50346)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..50346
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.007"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(201..2294)
                     /locus_tag="QEL58_000386"
     CDS             complement(201..2294)
                     /locus_tag="QEL58_000386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M13 family metallopeptidase"
                     /protein_id="HDS1674909.1"
                     /translation="MNVRNLVPLGLTIAIAASLAACGKNESAPAATADAKPAFDQSQI
                     KTPLISLNSADLDPAISACTDLNGFVNSKWLKANPVPGDQTTWGSFEILRERSLEVQH
                     TLVQQAAASQAKAGSVEAKIGDIWKTGNDEAKIEAAGLAPLQPTLDKIGALNDTAAIT
                     QYLRDSQAEGKGVLFSLFANADYKDSANVIAYVGQGGLGLPEKGYYFDDAQAKIRDAY
                     VAYIAQVLTLSGVDAAQAAEQAKAVMAFETRLAKASMSRIEMRDPAKRYNPLSAAAAD
                     TLTPNFSWTALFDTLKVPAAQKFSLAQPGFFGEMDKMLADVPASTWQAYLRFHTIDDA
                     SSYLSSPFEKANFDFYGTTLRGQKEMQPRWKRVLESVNGGMGEALGQLYVDAVFPAES
                     KVAMQHLVENLSVALKARLEQLPWMGEETKKKALEKWASFTPKIGYPDKWRDWAGLQT
                     NGDSYLGNMQAARAFNYRYMLDKIGKPVDKTEWGMTPQTVNAYYNATKNEIVFPAAIL
                     QAPFFDAKADPALNYGGIGAVIGHEMMHGYDDSGSQFAANGNFDNWWTDADRKAFTQR
                     TDQLVAQFDGYESVPGVFVKGKLTLGENIGDLGGLTVAYDALQMALKEDPKANVAVDG
                     HSQDQRFFMNWATVWRRNFTDGELRVRLNTDPHAPANFRANGAPSNMPSFAAAFQCKA
                     GDAMVRADDKRVVIW"
     gene            complement(2503..3252)
                     /gene="gpmA"
                     /locus_tag="QEL58_000387"
     CDS             complement(2503..3252)
                     /gene="gpmA"
                     /locus_tag="QEL58_000387"
                     /EC_number="5.4.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017167506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-diphosphoglycerate-dependent
                     phosphoglycerate mutase"
                     /protein_id="HDS1674910.1"
                     /translation="MTRKLVLLRHGQSQWNLDNRFTGWVDVDLTEQGRREAAAAGRLM
                     REEGLQFDVAHTSVLKRAIHTLQGALAELEQDWLPVNKSWRLNERHYGGLQGLDKAET
                     AAKHGEEQVKVWRRSYDIPPPPMELEDPGHPIHDRRYAGLDRNALPGTESLATTLDRV
                     LPYWHDAIAPQLKDGRTVLVTAHGNSLRALYKYLNNVSREEILELNIPTGIPLLFELN
                     DDLTVQSFRYLGDPEAARKAAEAVANQGKAK"
     gene            3347..4021
                     /gene="nfi"
                     /locus_tag="QEL58_000388"
     CDS             3347..4021
                     /gene="nfi"
                     /locus_tag="QEL58_000388"
                     /EC_number="3.1.21.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014036447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribonuclease V"
                     /protein_id="HDS1674911.1"
                     /translation="MNTMIDPGRWEGSVSAARAQQLQLAGRVERQDRLPRNVRWLAGL
                     DVGFEEDGAITRAAAVLLDATMLRPVAQEIARIPTVMPYIPGLLSFRELPALLAALAL
                     LPHAPDLVFVDGHGISHPCRLGIAAHLGVVTDLPSIGVAKSKLVGRFEEPAPEPGAHT
                     PLLDGNEQLGWVLRSKVRCKPLFVAGGHRVSADTALDWVQRTLRGYRLPEPTRLADRL
                     ASRRDE"
     gene            complement(4059..5039)
                     /locus_tag="QEL58_000389"
     CDS             complement(4059..5039)
                     /locus_tag="QEL58_000389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005412668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation transporter"
                     /protein_id="HDS1674912.1"
                     /translation="MGHDHDHLPSQIRHEKPLWWALGLTSTFLVVEVVGAFWTNSLAL
                     LSDAAHMATDALALMIALVAVRLSRRPPDARRTYGYARLEALGAMINGAMLFVVAAYI
                     LWEAVGRFREPQEIASSGMLVIAAAGLIINLISMRLLQAGSGESLNVKGAYLEVWADM
                     LGSVAVIAGALLIKWTGWKPIDPILAVLIGLWVLPRTYVLMREAINVLLEGVPKGMDV
                     AKVRDSLSGHAAVLDVHDLHVWALASSTPALTAHIVMRDGTDADVLRRELGGRLHDDF
                     GIEHVTLQIEADHCGEACGEPAPAKGGEHEGHEGHDHGEDAQGHRGHVHR"
     gene            complement(5219..7468)
                     /locus_tag="QEL58_000390"
     CDS             complement(5219..7468)
                     /locus_tag="QEL58_000390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005412669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent siderophore receptor"
                     /protein_id="HDS1674913.1"
                     /translation="MSRAVVLSPRPLALAVAALLAGSALTAQAETDATDIDTVHVTAS
                     QIARQALGTSTITAEDIAKRPPANDIAELLRTMPGVNLTGNSASGQYGNNRQIDLRGM
                     GPENTLILVDGKRIGARDAVRMGRSGERNTRGDTNWVPAEMIERIEVLRGPAAARYGS
                     GASGGVVNIITKRPTGDLTGAVDLYGLVPEHSAEGGSERVGLQLSGPMTDTLSFRLYG
                     NLNKTDADSLDLNRQYATNPNAVPPAGREGVKNRDVNALLRWDVTADQVVEFEAGTSR
                     QGNIYAGDRAVSTTGTSTGVDLAALADGKAETNRMYRNTGAITHRGRWGDVTSRVTAA
                     VEAVNNSRINEGLAGGPEGSFNGTDWSTSRLRNYQLDGEVSFPTTLGGAENIWTLGFE
                     YLDSRLTDPYSMSQSSSSGGGLPGLSADRARGKADAQTTAVFVEDNIYLGERWIVTPG
                     LRFDHHSQFGNNTSPSLNAQFRINSDWVVKGGIARAFKAPNLYQSNPDYLYYTRGNGC
                     PNALPSLGAGCYMRGNADLKAETSLNKELGVEWAPQSGWQASLTYFHNDYKDKIQAGY
                     DQIGLTADGRGRIFRWENAPKAIVQGLEGNLVIPLLGEQGNRLKWSNNFTYMVENENK
                     TTRQPLSVIPKYTINTMLDWQATDKLSLLLTGTFYGRQKPATTNINNDPRCTGTCDPS
                     LALQDRGAYNIWGVSARYRVTETVSFGFGVNNLADKRLFREANSSDAGAATYNEPGRA
                     YWASLRFGF"
     gene            7756..9171
                     /locus_tag="QEL58_000391"
     CDS             7756..9171
                     /locus_tag="QEL58_000391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014036444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HDS1674914.1"
                     /translation="MESPQLDDASQPLAEAWQHCLQQAGPAATALLRAAATDAPPALA
                     QRFYEVLLQDARARRFLSHEQVKQRLQPAMQRWLVQLLTTDAAGIATTVASQRVIGDV
                     HARVGIPVDLVTRGARVLKHELFVRLRDTAPDSATAFAAIDCLSAIMDIAMEGMTLAY
                     THARERSTRADAAYRLFSLVQNVSTERERQRALLLDWENALLYALAGHVQGSDSASLA
                     SSEFGLWFTHKGIPSFGESSETQQVGQLMARIDDRLQQAATDATAQRLAGLPLIREDL
                     AAIRTLMTLLFERIGELDAGSDALTNLLNRRFLPTVLRREIELATRNHAPFSLLLLDL
                     DHFKAINDGHGHDAGDRALQHVAGLLGQLTRGSDYLFRYGGEEFVVVLVAASESQAEV
                     IAESLRRQIAQSPVALANGQVLALTASIGVAGHDGHPDYERLMARADAAMYEAKRSGR
                     NRVVVASDALQEAPGRRALQR"
     gene            complement(9259..10473)
                     /locus_tag="QEL58_000392"
     CDS             complement(9259..10473)
                     /locus_tag="QEL58_000392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDS1674915.1"
                     /translation="MAASIPRPLLVLLAVAAGASVANVYYAQPLLDQLAQAFALDRAV
                     AGAVLAATQAGSVLALLGLLPLADRGDRRRLLRLQLMALVVALVWLAAARSAVWLLSG
                     MLLAGLLGTALTQGLIAYTATLSPPEQRGRSVGVVQGGVFIGLLLARVVSGVVAAGAG
                     WRAVYLLSALLMAALAGVLWRRLPAVPVPSIPPRWSALLCSMLGMLRRDRTLRERAPL
                     ALLLFAGLNVFWAAAPLPLSAPPLNWSTAAIGALGLAGVLGALMAARVGHWMDRGFAH
                     RVSLGALVLMLLAWWPLLGLQQSVSLLLLGVVVLDLGGQALHVSNQALLLRAPAEQHG
                     RLVALYMLFYAVGSGIGAAAGPWVQARHGWVAVCQLGAGIALMALLWWAAWRVVAFNA
                     PAGTRARRVDYL"
     gene            10555..10983
                     /locus_tag="QEL58_000393"
     CDS             10555..10983
                     /locus_tag="QEL58_000393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005412672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDS1674916.1"
                     /translation="MHADSPCPVARGADLLGDRWALLVIRDAFDGVSRFGDFQRSLGA
                     ARNILSDRLRRLVEAGILQLQPASDGSAYQEYVLTAAGLELFPLLVALRQWSERHRFG
                     AGEAHSSLIQRDNGSAVPYMQPLDNNRQPLPAHATVVRKL"
     gene            11128..11412
                     /locus_tag="QEL58_000394"
     CDS             11128..11412
                     /locus_tag="QEL58_000394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012511173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3649 domain-containing protein"
                     /protein_id="HDS1674917.1"
                     /translation="MARVNGHGLLWTRGLLALLGGYAVAACWAAALARLLPGTRADAT
                     LVATMAAFVVYALAAIWAYAARSTLRAALGLLAAGALAALIAWLLRGNIA"
     gene            11409..12998
                     /locus_tag="QEL58_000395"
     CDS             11409..12998
                     /locus_tag="QEL58_000395"
                     /inference="COORDINATES: protein motif:HMM:NF015863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY domain-containing protein"
                     /protein_id="HDS1674918.1"
                     /translation="MSSADNLGGIRQSQSVLHTWSGLVVGWVLFLIFIAGTASYWKEE
                     LTRWMQPEIGLPADATTAVNQAQQFLARTAADAQRWSIELPDSRSSATTVSWQPKGEK
                     ERRRGQRNPNQATLDADGTPVQVRETRGGNFFYRLHFDLHYVPVLWARWFISACSMLM
                     LVAIISGVITHKKIFTDFFTFRRGKGQRTWLDGHNALAVLSLPFHLMITYTGLITLMT
                     LYMPWAVDANYPGGRDAFFAELFPRAEKAEASGVAATPPALAEVLRRAEVQWGGGHAA
                     SLQVEQPADAAMRISVRRQQGDQIAGAADTLAFDARGNLLDAAPPRSAAVITRDGMIG
                     LHAARFAPTTMRWLFFLSGVAGTLMVATGLVLWTVKRRTQLPDPARPHLGFRIVERLN
                     IGFVTGLPVAMLAFLWGNRLLPLDVANRSDAEVKVFFYAWAACVVHAMLRPARRGWVE
                     QLALAGALALGLPLYNLVVWQGGAVSALANGDGAKAGIDIGLLLIGASLLWAARKVHR
                     FVPAQRKPRTARATTPAEAGA"
     gene            12995..13294
                     /locus_tag="QEL58_000396"
     CDS             12995..13294
                     /locus_tag="QEL58_000396"
                     /inference="COORDINATES: protein motif:HMM:NF023232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3325 domain-containing protein"
                     /protein_id="HDS1674919.1"
                     /translation="MSVLALLLAAAAFACLAMAMERHHRDVAGHAPPTPRRRLLQVLG
                     ALGLLASLLASITAWGAAQGFVGWCGVLAAGAGAMVLWLSFRSPAKPAPRPSSRS"
     gene            13312..15519
                     /locus_tag="QEL58_000397"
     CDS             13312..15519
                     /locus_tag="QEL58_000397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016944782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent siderophore receptor"
                     /protein_id="HDS1674920.1"
                     /translation="MKYTHSGALRRNALALSLACAASPSLAQDTAPATTELDRVMVTQ
                     RTEGYQVYGTNTATKLPLTLRETPQSLTVFTRQRIEDFNLITISEVLQQTPGVTIQSY
                     DSNRTLFNARGFAINNFMFDGIPTNYTTGAGGNSILSDTSIYERIEVVRGASGLVTGS
                     GNPSATVNMVRKRPTETFQASTSLSAGSWDYKRAEVDVSGPLSKSGRVRGRFVGAYTD
                     KESWVRFQHDKSPSLYGVIEADLTDSTRLRAGIDYLKTGSDGGAWSASPLYFRDGSRA
                     HMPRSYSAAARWNEWNRESTNYFATLEQQFGAGWSGRLAYNHRATDTDSLLLAGSNTG
                     NWADPVTGLGLRIADTYSVSETREDAFDLYASGPFQLFGRSHELVVGINHYDRDLDTI
                     RAGITSRPYSVAAFPSIFSWDGNIGKPTTYNYGIPSSTVNTTETGYYAAVRLNPIDPL
                     KIIAGARYSDYRTTTDNYNTDGVFTSRSARTTAHELTPYVGVLYDLSSSITAFASYSD
                     VFQATARRDINNQLLDPTTGGNYEYGLKADFFGGRLYAALNGFYMKQDNVAELDPNGG
                     EIKLPDGSSPYIASRGITTQGGEFEVSGSINDHWSMTGGYTYSYSSNPDGSRFASTSP
                     MHLARFNTTWTHGQWTLGGGVSVQSEIYQMQPIPTGRFTASGTPVTATGKMSQGGYVL
                     FDLMGRYRINDNLSVGVTVTNLFDKAYYRNVGFFNSGYWGEPRRVLFNLRAKF"
     gene            15587..16717
                     /locus_tag="QEL58_000398"
     CDS             15587..16717
                     /locus_tag="QEL58_000398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019184465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HDS1674921.1"
                     /translation="MLDRALSCPARLLLTLALLLGTPLLQAREVAAPAAHVEADGPYV
                     FRQGNQLQAKWICTDKVESHTLSTSAAGADVAPRCGYAHTVHVAAPTAPSVSVLPAVP
                     RIVALSDIHGQFGLLVRLLRANKVIDAQDRWAMGKDTLVIAGDVFDRGPQVTEAFWLL
                     YGLQQQAAAAGGAVHFVLGNHETMVLYDDLRYVNPKYLRSAQLLGRSYPQLYGADSVI
                     GQWLRTRPVLLKIGDTLFLHGGISPEAVALALDPARTNAAYQASLGLPKAEVKADPAT
                     APLYDGKTSPIWYRGYFDGRLDTAGVQAVLDRLQLKRIVVGHTSMPHVSSFHGDRVIA
                     IDSSIKNGENGELLFIENGALSRGLLDGSRVPLAPGEPGLQD"
     gene            16850..17533
                     /locus_tag="QEL58_000399"
     CDS             16850..17533
                     /locus_tag="QEL58_000399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014646433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HDS1674922.1"
                     /translation="MRVLIAEDDPDIASGLCASLRRQGHVVDHVDNGAHADAALGSTQ
                     YALLVLDLGLPQLDGRDVLQRLRQRGDGLAVLVVTARDGLAERVRVLDLGADDYLVKP
                     FALDEFEARVRAQLRRVTSNGNPDLRIGRLRLDLAGHRVWIDDQSLELTAREFGLLSA
                     LAVRAERIVSRAQLVEALCDWGQDLTDNGLDIALHRLRRKLQPGGMGIRTVRGLGYML
                     EDGQDDSAP"
     gene            17530..18909
                     /locus_tag="QEL58_000400"
     CDS             17530..18909
                     /locus_tag="QEL58_000400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004150095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase N-terminal
                     domain-containing protein"
                     /protein_id="HDS1674923.1"
                     /translation="MISGPPSLRRRLLAFLALPMLGLLVFNTILAYYVALDYSNRIHD
                     RNLIDDTHSFAQMLSTMPVTSDLSPQARFLIEYDPDGHRYFNVDSSRKGTLSGNADFS
                     PYAPSQDCAGVHPALYDGNLNGQQVRMATVCTQAMNDPQDQLAVTVAESMADRRQRAR
                     EILMIIIPLMTMLALGTAALVWFGVTYGLRILTPLRTRLAQRRGELAPISDADVPEEI
                     QPLISTIDDLFARQAEMITLQNRFIADAAHQLRSPLAGMALHVDQALAHGDPDTVREA
                     LQHIRRLNQRTARVSTQLLALSRAQTVPDTVEALDLCELVPQWVGMRVPEAIRDGIDL
                     GYRGGNQPLRVLGNGAMLQEALDNLIDNALRYAGRDATVTVGVHALDDNDVELYVEDN
                     GPGVPEDVMPRLGERFFRAPGTAASGTGLGLAIAHEAVEHFGGRLAFLNRPGGGLKVA
                     ITLPLLKAP"
     gene            18988..19824
                     /locus_tag="QEL58_000401"
     CDS             18988..19824
                     /locus_tag="QEL58_000401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HDS1674924.1"
                     /translation="MTESHDFFLPGGPQGVLLVHGLTGTPAEMRMLGKGLNNAGFTVH
                     GVQLPGHCGTVDDLLATTWEQWYQGVEDAAAELRGKVDQLFVGGLSMGAVLSLALAAR
                     RPEWVSGVGVYGATFRYDGWNIPAVARLSFLLPWFKRFNIGRDRMFMEEPPYGLRDER
                     LRAQVSAAMLSGDSAAAGLPGNPWHALAEMRALSHWTRRHLHQVTAPCLVMHAREDDV
                     ASMGNAELVMSRVSGPKELVVLEDSYHMITIDRERRDVIRRSARFFTEIGERSGVLKA
                     VA"
     gene            19826..20185
                     /locus_tag="QEL58_000402"
     CDS             19826..20185
                     /locus_tag="QEL58_000402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005415776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HDS1674925.1"
                     /translation="MGALATLLWLANVVLDTGGQLAFKAAASDPQDGEGLQRWKHMLS
                     RPWLWIGIACYVLEFVAWIAFLSLVPLSKGVLLGSINIVALMIAGRFLFREKLTPLRV
                     TGMLLVTAGVAVVGAGS"
     gene            20182..20580
                     /locus_tag="QEL58_000403"
     CDS             20182..20580
                     /locus_tag="QEL58_000403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019337581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HDS1674926.1"
                     /translation="MRRLYVIGFPLLMAFDTLAQLCFKYAGDAALPVEANSAWLLRVL
                     SQPWVYGAILGYIGAFFTWMSLLRHAPIGPAFAASHLEVISVLLLSAWLLNEPLTLHH
                     LVGAVLIVAGIVCLGRAEADDPHSPAESTA"
     gene            20591..21799
                     /locus_tag="QEL58_000404"
     CDS             20591..21799
                     /locus_tag="QEL58_000404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014036436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegT/DnrJ/EryC1/StrS family aminotransferase"
                     /protein_id="HDS1674927.1"
                     /translation="MSLFARELPPTAGLPMQASDFLPGGGDLRDILARQLGTPPLQLT
                     CSGTHALLIALRTLRKRAPNRDTVILPAYTCPLVPIAVHSLGLRVQLCDTRHGHFDFD
                     PGQLKRLADARTLAILPTHLGGRIADVELACEIARGAGAWVIEDAAQALGARIGNSSV
                     GLRGDIGFFSLAAGKGLSLHEGGLLVSRDDELRAALAGHAAEQVRFSLRWELLRSVQL
                     LGLAACYRPSLLSLVYGNPLRGALQRGDLEEAVGDIFPLQIPQHRVSQWRQNIGANAA
                     RRLPAFLQAGRLRALQLRVQLAQLPAVEVVDGLAGTGGTWPMLMLLLPSQRARDAALK
                     NLWPRGLGASRMFIHALPDYVYLRGIVPATDVPNARDFAARMLTLGNSAWQTREDTAE
                     ILRALADAQA"
     gene            21968..22684
                     /locus_tag="QEL58_000405"
     CDS             21968..22684
                     /locus_tag="QEL58_000405"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014036435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MtnX-like HAD-IB family phosphatase"
                     /protein_id="HDS1674928.1"
                     /translation="MHWSILCDFDGTISLEDVIDSLLEKYGQPGWQELEEQWKSGKIG
                     SRECMQGQVRLLKLDPATLDAHLDQVQIDPGFTAFVARAEQLGLPLRIVSDGLDYAIH
                     RILANHGLSRLPVVANHLRWCEDHWELESPYQSEGCRSGTCKCTCAAQARANEAPRVL
                     MIGDGSSDFCVSEDADFVFAKRRLITHCTHAGIEHAAIDTFHDAIALLPRLLDGSLLQ
                     PRRIDASPQPTALPLLLATA"
     gene            22750..24150
                     /locus_tag="QEL58_000406"
     CDS             22750..24150
                     /locus_tag="QEL58_000406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005408663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HDS1674929.1"
                     /translation="MNIFDKNADAAASDAQLLADEARYSSFGDTVHYVDPPKIFQRGE
                     GSYMFDGAGVPYLDLQMWYSACNFGYSNKRLNDALKDQIDTLPQVASQYLHPTRVQLA
                     KTIAVDMHEKFGLDGRVHFNVGGAQAIEDSLKIVRNARGGKSLMFAFEGGYHGRTLGA
                     SSITSSYRYRRRYGHFGERAMFIPFPYPFRRPKGMTPDEYSDHCVWQFERLFESEYNG
                     VWDPKVGQAEYAAFYVEPIQGTGGYVIPPRNFFTGLKRVLDKYGILMVVDEIQMGFWR
                     TGKLWSIEHFGVTPDVLVFGKALTNGLNPLSGLWAREELINPTVFPPGSTHSTFNSNP
                     LGTRLGLEVLKLGKEMDYERTVPEKGAYFLDGLRGLQKRHPEIGDVDGLGLALRAEIC
                     QTDGYTPNKELLDRMVDIGLAGDLLHDGKRMGLVLDVGGWYKNVITFAPSLDISYEEI
                     DLAITLLDQALTKAKG"
     gene            24179..25243
                     /locus_tag="QEL58_000407"
     CDS             24179..25243
                     /locus_tag="QEL58_000407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005412677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDS1674930.1"
                     /translation="MEMTSRASSTALEPAALLEGFLAHPPLGFEASRLPSGLPTFRAP
                     LDLTTTMDDALRGKLLGLPLSRLWRPWITWQTRFVGATSTEYTPLPAHVAPEALAEDV
                     TRHAIGDTRLLVVKDLAIDSPLLDDAANAHSGAFLQALLARGFVELEGMPLAWVAIDF
                     DSLDGYLGRLSSSRRKNIRRKLRSRDDLQIDCIASGDPALADPQLQAELYALYLGVYA
                     QSAVHFDQLDLPYFQHLLADSQGQGRMFLYRHQGQLIGWNLCYVHAGKLVDKYIGLAY
                     PQSREHNLYAVSWMHNLEYALQHGLSHYVAGWTDSRIKAELGASFTSTRHAIHARSPL
                     LRAALRRLAPHLQGEPDGGG"
     gene            25247..26131
                     /locus_tag="QEL58_000408"
     CDS             25247..26131
                     /locus_tag="QEL58_000408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012479555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginase family protein"
                     /protein_id="HDS1674931.1"
                     /translation="MPLRSPLILDLDGGVLPLPQAQTLALPQWHDPLRFACSNATLNR
                     FAADVLAPLPAQLGTVMLGSGDFHHLSLPLLQRMRPQAPFQLVVLDNHPDNMRFPFGM
                     HCGSWVNAASKLPQISHIHVLGITSSDIGLGHAWENHWRPLLGGRLTYWCMDVDVGWG
                     HRLGMGRAFRRFEHPEALVAAFAAEQAKSPQPTYLSIDKDVFAEDVARSNWDQGRFQL
                     EDALVVIEALRAGGLVGSDITGEVSLANYRSRFKRWLSSLDGQPDIPADDLPVWQARH
                     QQVNRELLAAMAAVPTAC"
     gene            26197..26556
                     /locus_tag="QEL58_000409"
     CDS             26197..26556
                     /locus_tag="QEL58_000409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012479554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HDS1674932.1"
                     /translation="MPQTVIPQLRMRHADTSLPFYVQGLGFVVDWEHRFEPGFPLFAQ
                     LTRDGQTLFLTEHTGDCEVGGAVYFIVEDVDALHRAFSAANVPIEQPPHDTEWGSREM
                     LLRDPDGNRLRFATHAD"
     gene            26625..26837
                     /locus_tag="QEL58_000410"
     CDS             26625..26837
                     /locus_tag="QEL58_000410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014091192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParD-like family protein"
                     /protein_id="HDS1674933.1"
                     /translation="MGIVNIDDTLHDQLRRACTVSSRSINAQANFWIRVGMLCEMNPT
                     LSFQDIVASELRAAGVQPQALAPGRA"
     gene            26845..27627
                     /gene="map"
                     /locus_tag="QEL58_000411"
     CDS             26845..27627
                     /gene="map"
                     /locus_tag="QEL58_000411"
                     /EC_number="3.4.11.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014646421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I methionyl aminopeptidase"
                     /protein_id="HDS1674934.1"
                     /translation="MIKQPHEIALMAESGRLLAQVFAALDRLPLQGRSTMEINDFVER
                     MIVDELQARPASKGQYGFPYVLNTSIDNVICHGVPSTTDVLRNGQIVNLDITLEKNGY
                     IADSSTTYLVGEVDYAARRLVQTTYQAMWKGIATVRPGARLGDIGHAIARHARSHGYS
                     VVKEYCGHGIGQEMHEEPQILHYGHPNTGMTLEEGMVFTIEPMLNQGKPAIRQQPDEW
                     PVYTRDGKLSAQFEHTVAVTASGVRVLTLRPGEAPLCAVDAA"
     gene            complement(27624..28238)
                     /locus_tag="QEL58_000412"
     CDS             complement(27624..28238)
                     /locus_tag="QEL58_000412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008267534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid transporter"
                     /protein_id="HDS1674935.1"
                     /translation="MWIAATTAGLFAGAGLIIAIGAQNAFVLRQGLQRRHVGTVVLAC
                     AGADIALILAGVGGMGALVQQWPLLLQVLRFGGAAFLLWYGLQAGLRAWHGGSALAAA
                     ETQGGSGRQVLLTCLAFTLLNPHVYLDTVVLLGSLSTRYPGDLRWAFAAGACVASVAW
                     FCTLGYGARLLQPVFRRPAAWRVLDAGVAVFMFCLATLLLLRPL"
     gene            28344..29237
                     /locus_tag="QEL58_000413"
     CDS             28344..29237
                     /locus_tag="QEL58_000413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017161642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator ArgP"
                     /protein_id="HDS1674936.1"
                     /translation="MDLVHPQLAAFAAVLEEGSFEAAARRLSISPSALSQRIKALEDR
                     LGQVLVVRQAPCRPTAAGEALLRRVRPMQALEAEALAELLPERGSDAARTPIPLAIND
                     DSLDTWFVPAIAELHQRHGYLFDLRMDDQDHTLQLLRDGSVLGAVTAEGQPVKGCNVH
                     PLGAMRYHAIASPGFARQYFSDGMQAAALARAPMLVFNRKDELQWRFVRRLTRARLQP
                     PLHYLPSSTGFVEAAACGLGWGMAPETLVAPAVHAGRVVVLEPRRWLDVPLYWQHAAV
                     RSSTLQHITQALRSAASGTLR"
     gene            29316..30722
                     /locus_tag="QEL58_000414"
     CDS             29316..30722
                     /locus_tag="QEL58_000414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004149837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HDS1674937.1"
                     /translation="MGVIGRRTRMLRAKAALALTLATCLPITASAQSITDAPALDWEQ
                     ARQRLEQVSDALAAADAAVRNKQDLQDATRLLRLPEITGEVRRLQFQKTLTLPLGSLA
                     PVAEAFGIDSPLSFTERDWRTRPVVTAVLPLYTGGVIPAAQRAASAAHEQASAEREAQ
                     RQSLTVQLAQAYFGQRLAEQAVDVRRDVRDGLNRHLSDAEKLEREGFATRAQRLQATV
                     ARDKAEREYQKTVNDLATLKAALSTLLRSGGEVQPVSPLFVQRAPLEPVARFERTAQA
                     RQPQIARLRAMVAQAEQGVRVQQAKLKPQIFAFGQYDFRRRDEMLTDPDWAFGIGLKY
                     TFLSPNSRPAQISAARAQQEQAEAGLREAENQVALGVRKAWNELETARQQFVLLDSSI
                     AQAQENLRLQELAFREGQATSLDVIDARLGLGGARVERAQAAYQYDVALAQLLEVSGQ
                     MDRFEEFRRRADEVIDHE"
     gene            30715..31728
                     /locus_tag="QEL58_000415"
     CDS             30715..31728
                     /locus_tag="QEL58_000415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HDS1674938.1"
                     /translation="MSDVLHDDATTPPGKRRLGPILMVVLLVVVVLGLWLAWRSPGDQ
                     IQGMADADTINVAAKITARVAELKVREGDRVQSGQVLFLLDSPEVAAKEQQAHGALAA
                     AQAVADKADEGARSEDIRAAEANWKRAEAGATLAEATYQRVQNLFNEGVMTRQKRDEA
                     HAQATSSRELARAARAQYDMALSGAREQDKRAAQGQVQQAQGAVAEVNAARAEVEGRA
                     PVAGEINKRMADPGELVPAGYPVFTLVDIDRMWVAMNLRESQMQGLKVGSKLRGSVPA
                     LGQDGEFEVYFINPAGDYATWRTTRQSSGYDVRSFEVRVRPVRRIEGFRPGMSVLFAW
                     PQH"
     gene            31713..32900
                     /locus_tag="QEL58_000416"
     CDS             31713..32900
                     /locus_tag="QEL58_000416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005408650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDS1674939.1"
                     /translation="MAPALSPDGGGFAASWRRELRSLRGNRADLMLVTVLPLLMLVVM
                     AWMFTPSVMRDIPIAVVDLDHSSDSRLLLRMLDDSPGVRIASQPADIEDARSQLRRLD
                     VFAIVLVPRDVTRQALRGRQGTVFAYYNATYMTTGQSAARDIGDAVSAWNARLLRERI
                     GLQVGPGKLRAAPIAVQSDILYNPARSYELFLLPLIFPAVLSLVLALAVAGSLGREIR
                     DGTLPDWLRRTPWAAIAGKAAPYILLFSLYGALGLGYLAWLRGDGVAGSVLLLLLAQP
                     LFYLATAAYALFFVGVTRDMGTALSAVGLSIGTALAFSSATFPVLDGPLFTRIWHQLL
                     PLSAYIKLQTQQQFIGSPLLVSLWPLATLLLMSVVAGGIGGLRLIAFARTPDAVQPAR
                     ADA"
     gene            32897..34024
                     /locus_tag="QEL58_000417"
     CDS             32897..34024
                     /locus_tag="QEL58_000417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005412689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDS1674940.1"
                     /translation="MSTLWRSLRQTLMAVLCDRYAIVVMVGAVILYSFFYPAAYRHQV
                     AGNLPVLVVDEDHSATSRELLRKLDALRVARVVGQPADIDSARQQLEAGHAEGIVLIP
                     ANLERDILRGHPAKLVLLGNGAYLGRASWVLGSVADALGAFGREAVVGQAAFMGAPQA
                     PPVTLVQRPLYNTQEGYGSAIVPGVAELIVHQTLLMGIGVLLGGRRLALGRRLRFDLP
                     TLAGMALGFGLIGLFGLFYYAGFTAWVQDYPRGGNPLGQLLGGTLFIAATVAFGLFVG
                     SFFRTRERAFQYIIATSIPLFFLANLSWPAVMTPRPLVWLAQLLPTTSGINLMVRLNQ
                     MDARLTEVSHELITLSILLLLYGSLAAWRLLAKKGTEGIKS"
     gene            complement(34070..35446)
                     /locus_tag="QEL58_000418"
     CDS             complement(34070..35446)
                     /locus_tag="QEL58_000418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010483218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674941.1"
                     /translation="MNESPLTESHTPVAEVDPVLEATARFGRLRERTDELELFISGLL
                     AFALLAVPGYLFDAWARSSLHTEGIYFQLLWFGFSISVGMCYVLAVALIAHLTVRGYW
                     IGLIGLKSHFPKGIDWQRLPQMGPVSRAFLKARDGGLDGSIERADRLATMLFSTTLLA
                     VQTLAGTLVMAVLTLCVAMAISALAGGSERVVMIVVISVLTGLLALALVPALLERVIA
                     RRQRRNQAHEGLQHWLQRFLAGLQRIPLLRQMQTMQLTLQSNLRSRSFMAVYLLAVVV
                     AMVLGAVQVLGSVKFSLFNRYQVMTDEAVEHGMLSAHYESMRSAHDQLLAYPMIPSDT
                     ITGSRLRVFIPHRPQRDNPLARQHCSALPGARNEAVGAQAASAAVECLSRLWQVQLDG
                     APVDLHEFMPMERRDVDMRGLVGYLPMAGLVPGRHDLNLVWNAEGGERGPERRREYRI
                     PFWYAPDP"
     gene            complement(35600..35968)
                     /locus_tag="QEL58_000419"
     CDS             complement(35600..35968)
                     /locus_tag="QEL58_000419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008268471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine zipper 2TM domain-containing protein"
                     /protein_id="HDS1674942.1"
                     /translation="MAMKTSTRLLVLGTLLAASSVAGAQTYGPRDEGRKFNDGSRVVC
                     KNVEVQRNSRDPNRIAGTATGAVIGGLLGNQVGGGNGKKLATVAGAVAGGAAGRQIQG
                     NSQQKNGDRVVERRCERVYR"
     gene            complement(36135..38357)
                     /locus_tag="QEL58_000420"
     CDS             complement(36135..38357)
                     /locus_tag="QEL58_000420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004149782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing protein"
                     /protein_id="HDS1674943.1"
                     /translation="MLALRNLRVGSRLGAGFGLLLLFIMAIVGLVLYGNQLKSAQFEK
                     VVDVNMVKMRLLNDMLDTNNAVLMHRRLMVIKRGEDFDKDYQKAQELSQTYDGIWARY
                     IKIPRDATGDALVAKIDAARKATDASTQHLHERMKAGDFDGAAKELLAEHGLATAWNE
                     SISTLLRHQETLTERSRQEYRSTEAWTGTLSIVFGVMSLILGSLAAWAITRSLTRPLE
                     GAVKLADGIAGGRLDNVIDASGNDEVTQLLRSMQRMQMQVQAVMAAQGELARQHDAGS
                     LSYRMDESAFPGDFGRMVHETNALVGSHVQVQNRLIEVMKHYARGDLSVDMDPLPGEK
                     AAITQAMDETKSSLSAINSEIRRLATAAAAGDFSLRGDEDRFAYDFRDMVAGLNQLMQ
                     TTDENLVQVSTLLQAISRGDLTVRMQGDFHGVFARMRDDCNATVDQLKQIVGRIQASA
                     SSINLAAGEIASGNTDLSRRTEQQAANLEETAASMEELTSTVKQNAEHARQANQLAIG
                     AHGVASQGGEVVGQVVTTMSAIEAASKKIAEIISVIDGIAFQTNILALNAAVEAARAG
                     EQGRGFAVVASEVRTLAQRSAGAAKEIKGLIEDSVGKVADGSALVRQAGTTMGEIVAS
                     VQRVTDIMADISAASQEQSSGIEQVNQAVVQMDETTQQNAALVEEASAAARSMEEQAN
                     LLAEAVSVFRTGAATAAAVVRPALAAVAASVAPVRRATVLSPRIDSTLAANAGGWQEF
                     "
     gene            38661..39053
                     /locus_tag="QEL58_000421"
     CDS             38661..39053
                     /locus_tag="QEL58_000421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005408640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="barstar family protein"
                     /protein_id="HDS1674944.1"
                     /translation="MSLVLHIDGASINDIASLYAEINRVFMASENWQLGASLDALDDL
                     LWGGYGVLAGHSAATVVWHDIAHSRSVLGRDATHAWLRSKLDQPGTFNVAAINEQIAA
                     LEHGQGQTYFEIVMEIFDGHPQITLVAA"
     gene            complement(39082..40074)
                     /locus_tag="QEL58_000422"
     CDS             complement(39082..40074)
                     /locus_tag="QEL58_000422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019337566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HDS1674945.1"
                     /translation="MAHVHLLAADNQRGLSHDIQVIERSLRQLGHEVTISRLDAVRNG
                     GAWKLRRLRLRRLLASWLSLGRKPARFDINISLEHVRPASFGLAEVNLLIPNPEWVSA
                     RSLRILPRFDALLTKTEDATRIFTALGMRALEVGFCSRDRYDASVPRKPRSFLHAAGS
                     SRMKGTATLVKVWKRHPEWPLLTVLRGGPSDEDEGGAANLRIVRERLPDEEVQRLQNE
                     HVFHLCLSQTEGWGHYLVEAMSCAAVVITCDGAPMNQMIDESRGLLVTAHEGAPCHLS
                     RTWHVDETALEQAVERALAMDEAECTRLGANARAWHLASEVAFPLRLGEALAKF"
     gene            complement(40074..41351)
                     /locus_tag="QEL58_000423"
     CDS             complement(40074..41351)
                     /locus_tag="QEL58_000423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019337565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-antigen ligase family protein"
                     /protein_id="HDS1674946.1"
                     /translation="MTAACMAAEPRHYWRIALLSTLVAVVPLAGSAPYNLLKAVLLLA
                     LLVAGVVLIRRQPDVRLRYRIARFIVIACLLRLAFAFFSIAWHDLRWSELDLPAQMLL
                     YLGTAAVFAAVLDWRLILTLFALSTLVFGGSCIVQHHVMGLERAYGFSGGEWTAIEFT
                     MVTLCMALFSVIRLIQPNVHPAERCLHGVAVAVGVYGSILAQSRGPILAFIPAMLMVM
                     TVHVWRTRRWRGPLAFVGALVIGVLGATTVLNHQVIQRFGEVSGEIAGFNQHNEVGSV
                     RERIAMWGVAVDAIAEHPLTGVGLNQFGTYAREGIARGEVSDAISRYNHPHNEYLEAA
                     VTGGVPLLLIMLLIFILPGIHFVRRIGHADETTAMVATAGLAVVIVYALSAFTDNVFY
                     RAMPHSFYFYLVLGFVLATALPVRDLRRDGSSH"
     gene            41629..44244
                     /gene="mutS"
                     /locus_tag="QEL58_000424"
     CDS             41629..44244
                     /gene="mutS"
                     /locus_tag="QEL58_000424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010483231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair protein MutS"
                     /protein_id="HDS1674947.1"
                     /translation="MTDTKDNTSNAKASKEHTPLMKQFFAAKSDHPDLLLFFRMGDFY
                     ELFYDDARKAARLLDITLTQRGSSGGAPIPMAGVPVHAYEGYLARLVALGESVAICEQ
                     IGDPALAKGLVERKVVRIVTPGTVTDEALLDERRDTLLMALSRTKQGYGLAWADLAGG
                     RFLVNEVETDDALEAELARLEPAELLVPDEENWPEFLRQRTGVRRRAPWLFDADSGRR
                     QLLAFFKLHDLSGFGIDDKPRATAAASALLGYVEETQKQRLPHLTSIAMETAGEAIAM
                     NAATRRHLELDTRVDGDTRNTLLGVLDSTVTPMGGRLLRRWLHRPLRLREVLVQRHHA
                     VETLIDRGSDADIREQFRRLGDLERILTRVALRSARPRDFSTLRDGLGLLPAVREVLA
                     PLDSPRLQALHAALGEHDECAQLLASAIAEMPPLKLSDGGVLADGFDEELDELRRLST
                     HADQFLVDLEQRERESSGIATLKVGYNRVHGYYIEISKGQSDRAPVHYTRRQTLTNAE
                     RYITEELKAFEDKVLSARDRSLSREKYLYEQLLDTLGGQLEPLKQCAAALSELDVLAG
                     FAERAQALDWARPELQAEPCLKIERGRHPVVEAVREQPFEPNDLDLHPDRRMLVITGP
                     NMGGKSTYMRQNALIVLLAHIGSFVPASRALIGPIDRILTRIGAGDDLARGQSTFMVE
                     MAETSYILHHATAHSLVLMDEIGRGTSTYDGLALADAVARHLAYQNRCYTLFATHYFE
                     LTALADEQHEGGRSGIANVHLDAVEHGEALVFMHAVKDGPANRSFGLQVAALAGLPRT
                     TVAQARRRLAELEQRGGESHAAELAPQALDAPQQFGLFAAPASKAQEALAAIDPDELT
                     PKQALEALYRLKALL"
     gene            44566..46077
                     /locus_tag="QEL58_000425"
     CDS             44566..46077
                     /locus_tag="QEL58_000425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012479536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="catalase"
                     /protein_id="HDS1674948.1"
                     /translation="MTTAFGAPVVDNQNSKTAGPRGPLLMEDVWLLEKLANLNREIIP
                     ERRMHAKGSGAFGTFTVTHDISKYTRAKLFEKVGKQTEMFARFTTVAGERGAADAERD
                     IRGFALKFYTEEGNWDLVGNNTPVFFLRDPRKFADLNKAVKRDPHTNLRSARNNWDFW
                     TLLPEALLQVTVVMSDRGIPRSFRHMHGFGSHTYSFTNADSERFWVKFHFVSQQGIES
                     LTDAQAQILVGHDRESHGRDLFAAIDKGDFPKWKLFIQVMPELDAETYRVHPFDLTKV
                     WPKSDYPLIEVGQFELNRNPVNWYQDVEQSAFAPSNLVPGIGPSPDKMLQARLFAYSD
                     AQRYRLGVNHHQIPVNAARCPVHSNHRDGAMRVDGNYGGLPHYEPNSYGQWQEQPEYR
                     EPPMKIRGDADFWNFREDDADYFSQPGALFRSYNQAQKDRLFANTARALGDAPDFIKQ
                     RHIDNCSKADPAYGAGVAAALKALASQPSDPFKPAQPETDFPAATPGAEDIEL"
     gene            46186..46788
                     /locus_tag="QEL58_000426"
     CDS             46186..46788
                     /locus_tag="QEL58_000426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF937 domain-containing protein"
                     /protein_id="HDS1674949.1"
                     /translation="MSLTDELLAKLQGAPLQQVSQQLGISDTQASGAISAALPVLMGA
                     LGNNAAQPQGAQALLGALQNNHSGLDLGSVLGSVLGGGGGGAASDGAGILGHIFGGSQ
                     QKVETGLAQATQLDSGRTSQLLQILAPIVMAFLAQRLGGGQADAGSLSQALGQEKQQV
                     QQQGGIAGGLLGSVLDQDGDGQFGMSDLLKLGGNLLGGKR"
     gene            complement(46861..48048)
                     /locus_tag="QEL58_000427"
     CDS             complement(46861..48048)
                     /locus_tag="QEL58_000427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019337563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cellulase family glycosylhydrolase"
                     /protein_id="HDS1674950.1"
                     /translation="MRCLLFCLSLLAAAPLHAADITFWDAPQRGGNSMNMSPPDRDYF
                     EALRATGATWVRLVPDKWKAQGGRDFLIGNADDYQGLVAADLATLRRVLDDADAAGLK
                     VVLTPLSLPLLRWKQHNGDKVDQRLWQSFDNHAPALRFWHDLAVALKGHPALAAYNLI
                     NEPVPEYGAGLAEHASSEAMRQWYAGVQDGPRDLRRFYSELIARIREVDAEMPLMLDA
                     GWYAAADGFNYWPAPLDDAKLLYSVHMYEPYAATSAPNQKRAKPWRYPGSVPFGGHSE
                     RWDAARVRSYLQQPMEWAKTHGVGANRMVVGEFGCMRRWPDCSRYLQDVLQVLEQDKV
                     HWAFYAFREDGWDGMDYELGDKALPWSYWQAQEQGKPAVPPRSMQAPLFAPILQRLKA
                     GNR"
     gene            complement(48162..48569)
                     /locus_tag="QEL58_000428"
     CDS             complement(48162..48569)
                     /locus_tag="QEL58_000428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding S4 domain-containing protein"
                     /protein_id="HDS1674951.1"
                     /translation="MHELSPLSPSVRLDIWLWAARFFKTRSLAKQAIETGKVSVAGQR
                     PKSSRAVRVGEQLQVDRGEEHFEIQVLGLSDQRGPAPAAQQLYTESEASKARRAEQRA
                     LRIAARDGFQPPEHKPDKRARRLIRALGDIDAL"
     gene            complement(48579..48818)
                     /locus_tag="QEL58_000429"
     CDS             complement(48579..48818)
                     /locus_tag="QEL58_000429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005412658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674952.1"
                     /translation="MHQRLRVGRGMALALIGVVLAACSMDDRLGDTQVRPTDRPECLV
                     GSQRQDLSAGVPTLIGGSGCRTDPDHPRPLNKPPE"
     gene            48881..>50346
                     /locus_tag="QEL58_000430"
     CDS             48881..>50346
                     /locus_tag="QEL58_000430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014036411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HDS1674953.1"
                     /translation="MAKAPLDLTSGPIGRNLLLFSLPILAGNIAQSLNGSVNAVWVGR
                     FLGEAALTATANANNIMFFLIGSVFGFGMASTILIGQAIGARDIAQARRVVGTSATFF
                     IGLSVIIAIAGWFMAHPLLAAMGTPAASLPLAEAYLQIIFLAMPTLYAFAFLTAALRG
                     AGDSRTPFRFLMVSVALDIVLNPVLIFGMGPFPALGIAGSAWATLVAQTLSLAGLLLY
                     MRHKRHTLWLGRADMRLFKLDLTILKALVLKGVPMGLQMVLISLSVILLMTMVNQYGT
                     ATGAGYGASLQLWNYLQMPAMAIGAACSSMAAQNVGAQRWDRVRGTARQGVMFNFLLT
                     GALILPLVVFDRQLLALFLPPASEALDIARHLNHVVIGSFLFFGVSFVISGVVRSTGA
                     VIPPLLILAGSLWGVRVPFAELLQPYWGADAIWWSFPVSSFVSMLLSLAYYRWGGWRK
                     AKMIGKPSHAEELATPSEIPACPPSPVADPDAALESAPP"
BASE COUNT         8391 a        17541 c        16216 g         8198 t
ORIGIN      
        1 gatagtcgac caacggtcga ctctaccaag cgggttccat cggaccggtt ggtcgactgc
       61 ccttcgtcca gatcgagaaa tcccgcgctg cgcgcgatag tcgaccaacg gtcgactcta
      121 ccgatccggc gccaccgggc cgacaagcaa aaggcccggc gttcgccggg cctttcgcat
      181 cacgcatcac gtgcgatcga ttaccagatc accacgcgct tgtcgtcggc acgcaccatc
      241 gcgtcaccag ccttgcactg gaacgcggca gcgaaggacg gcatgttcga cggcgcgccg
      301 ttggcacgga agttcgccgg ggcgtgcggg tcggtgttca aacgcacgcg cagttcaccg
      361 tcggtgaagt tgcggcgcca cacggtggcc cagttcatga agaagcgctg gtcctggctg
      421 tggccatcga ctgcgacgtt cgccttcggg tcttccttca gcgccatctg cagcgcgtcg
      481 taggccacgg tcaggccacc caggtcgcca atgttctcgc ccagggtcag cttgcccttc
      541 acgaacacgc ccggcaccga ctcatagccg tcgaactgcg cgaccagctg gtcggtacgc
      601 tgggtgaagg ccttgcggtc ggcgtcggtc caccagttgt cgaagttgcc gttggcggcg
      661 aactggctgc ccgagtcatc gtagccgtgc atcatctcgt ggccgatgac cgcaccgatg
      721 ccaccgtagt tcagcgccgg atcggccttg gcgtcaaaga acggcgcctg caggatcgcc
      781 gccgggaaca cgatctcgtt cttggtggcg ttgtagtagg cgttgacggt ctgcggggtc
      841 atgccccact cggtcttgtc caccggcttg ccgatcttgt ccagcatgta gcggtagttg
      901 aacgcacgcg cggcctgcat gttgcccagg tagctgtcac cgttggtctg caggcccgcc
      961 cagtcacgcc acttgtccgg gtaaccgatc ttgggggtga agctggccca cttctccagt
     1021 gccttcttct tggtctcttc acccatccac ggcagctgct caaggcgcgc cttcagcgct
     1081 accgagagat tctccaccag gtgctgcatg gccaccttcg actcggccgg gaataccgcg
     1141 tcgacgtaca gctggcccag cgcttcaccc atgccgccgt tgaccgactc cagcacgcgc
     1201 ttccaacgcg gctgcatttc cttctggcca cgcagggtgg tgccgtagaa gtcgaagttg
     1261 gccttctcga acgggctgct caggtaagac gaagcatcat cgatggtgtg gaagcgcagg
     1321 taggcctgcc aggtactggc cggcacgtcg gccagcatct tgtccatttc accgaagaaa
     1381 cccggctggg ccagcgagaa cttctgcgcg gccggtacct tcagggtgtc gaacagcgcg
     1441 gtccagctga agttcggcgt cagcgtgtcg gcggcggcgg cgctgagcgg gttgtagcgc
     1501 ttggccgggt cacgcatttc gatgcgcgac atcgaggcct tggccaggcg ggtttcgaag
     1561 gccatcacgg ccttggcctg ctcggccgcc tgcgcagcat ccacgccgga cagggtcagc
     1621 acctgcgcga tgtaggccac gtaggcgtcg cggatcttgg cctgggcgtc atcgaagtag
     1681 tagcccttct ccggcaagcc caggccgccc tggccaacat aggcgatgac gttggccgaa
     1741 tccttgtaat cggcgttggc aaacagcgag aacagcacgc ccttgccctc ggcctggctg
     1801 tcgcgcaggt actgggtgat ggcggcggtg tcgttcagcg cgccgatctt gtcgagcgtc
     1861 ggctgcagcg gcgccaggcc ggcggcttcg atcttcgctt cgtcgttgcc ggtcttccag
     1921 atgtcaccga tcttggcttc caccgaaccg gccttggcct ggctggcggc ggcctgctgt
     1981 accagcgtgt gctgcacttc cagcgagcgc tcgcgcagga tctcgaagct gccccaggtg
     2041 gtctggtcgc ccggcaccgg gttggccttc agccacttgc tgttgacgaa gccattgagg
     2101 tcggtacagg ccgaaatggc cgggtccaga tcggcgctgt tgagcgagat cagcggcgtc
     2161 ttgatctgcg actgatcgaa ggccggcttg gcatcggcgg tggcggccgg cgcggattca
     2221 ttcttgccac aggcagccag cgaggcggcg atggcgatcg tcaggcccag cgggaccaga
     2281 ttgcggacgt tcatgaggct ctcctgcggg taatcccaca gggtagccgg ggaggcccgc
     2341 ggcagggacc ggccaaaggt cacagggcac cgcctctgta gagtcgagcc acgctcgact
     2401 gctctccgtt gcggattcgt gcccccgtgg caagaggcca aaagcagtcg agcatggctc
     2461 gactctacaa aaacgaaggc cggcttgcgc cggccttctg ccttatttcg ccttgccctg
     2521 gttggccacg gcttcagcgg ccttacgtgc cgcttccggg tcgcccaggt agcggaacga
     2581 ctgcacggtc aggtcgtcgt tcagttcgaa cagcagcggg atgccggtcg gaatgttcag
     2641 ctcgaggatt tcctcgcgcg agacgttgtt gagatacttg tacagcgcgc gcagcgagtt
     2701 gccgtgggcg gtgaccagca cggtcctgcc gtccttcagc tgcggcgcga tggcgtcgtg
     2761 ccagtagggc agcacgcggt ccagcgtggt cgccagcgat tcggtgcccg gcagcgcgtt
     2821 gcggtccagg ccggcgtagc ggcggtcatg gatcgggtgg cccggatctt ccagctccat
     2881 cggcggcggc gggatgtcgt acgaacgacg ccacaccttg acctgctcct cgccgtgctt
     2941 ggccgcagtc tcggccttgt ccaggccctg caggccgccg taatggcgct cattgaggcg
     3001 ccaggacttg ttcaccggca gccagtcctg ttccagctcg gccagcgcac cctgcagggt
     3061 gtggatggca cgcttgagca cggaggtatg ggcgacatcg aactgcaggc cttcctcgcg
     3121 catcaggcgg ccggcggcgg ccgcttcccg gcgcccctgc tcggtgaggt cgacatcgac
     3181 ccagccggtg aagcggttgt ccaggttcca ctggctctgg ccatggcgca acagtacgag
     3241 tttacgggtc actgcagggt ctccaacgcg aggaaaggca ggccgccatt gtagccccgg
     3301 ccgctgctca ccgggccgtg gcgccgcgca tgcaatgctg tgaccgatga atacgatgat
     3361 cgaccccggg cgctgggaag gcagcgtcag cgccgcccgc gcgcagcagc ttcagctggc
     3421 cggccgcgtg gagcgccagg accgcctgcc ccgcaacgtg cgctggctgg ccgggctgga
     3481 tgtcggcttc gaggaggacg gcgccatcac ccgcgccgct gcggtattgc tggacgcaac
     3541 gatgctacgg cctgtcgcgc aggagatcgc gcgcattccc acggtgatgc cctacatccc
     3601 cggcctgctc agtttccgcg aactgcccgc gttgttggcg gcgttggcct tgctgccgca
     3661 cgcgcccgac ctggtgttcg tcgatggcca cggcatcagc catccgtgcc ggttgggcat
     3721 cgccgcgcac ctgggcgtgg tcaccgacct gccaagcatc ggcgtggcca agtcgaaact
     3781 ggtgggccgc tttgaggaac cggcaccgga acccggcgcg catacgccgc tgctggacgg
     3841 caatgaacaa ctgggttggg tactgcgtag caaggtgcgc tgcaagccgt tgttcgtggc
     3901 cggtggccat cgggtcagtg cggacaccgc gctggactgg gtgcagcgca cgctgcgggg
     3961 ctaccgcctg cctgagccga cccggctggc ggatcggctg gcctcgcgcc gggacgaatg
     4021 agcgcagcgg gcatccccgg cacggccttc gatttcgatc agcgatgcac gtggccgcga
     4081 tggccctgcg cgtcctcgcc gtggtcgtgg ccctcatggc cctcgtgctc gccgcccttg
     4141 gccggcgccg gttcgccaca ggcttcgccg cagtggtccg cctcgatctg cagcgtcaca
     4201 tgctcgatgc cgaagtcatc gtgcaggcgg ccacccagtt cacggcgcag cacatcggca
     4261 tcggtgccgt cgcgcatcac gatgtgcgcg gtcagtgccg gcgtgctgga agccagtgcc
     4321 cacacatgca ggtcatgcac gtccagcacg gccgcatggc cggacaggct gtcacgcacc
     4381 ttggccacgt ccatgccctt gggcacgcct tccagcagca cattgatcgc ctcgcgcatc
     4441 agcacgtagg tgcgcggcag tacccacagg ccgatcagca cggccaggat cgggtcgatc
     4501 ggcttccagc cggtccactt gatcaacaac gcgccggcga tcaccgccac cgagcccagc
     4561 atgtccgccc acacttccag gtaggcgccc ttcacgttga ggctctcgcc actgccggcc
     4621 tgcagcaggc gcatcgagat caggttgatg atgaggcccg cggcggcgat caccagcatg
     4681 ccggaggaag cgatctcctg cggctcgcgg aaacgtccca ccgcctccca caggatgtag
     4741 gcggcgacca cgaacagcat cgcgccgttg atcatcgcgc ccagcgcttc caggcgtgca
     4801 tagccgtagg tgcggcgcgc gtccggcggg cgccggctca gccgcaccgc caccagcgcg
     4861 atcatcagcg ccagtgcgtc ggtggccatg tgcgcggcat cggacagcag cgccaggctg
     4921 ttggtccaga acgcccccac cacttcgacg acgaggaagg tggaggtcag gccgagcgcc
     4981 caccacaggg gtttctcgtg gcggatctgg gatggcaggt gatcgtggtc gtggcccatg
     5041 gcaacagctc ctttgcgatg gacgcaggct acgcgcgcgt gcgtggggaa actatcacgg
     5101 tgtttataac attgcaggcc acgcggtccc tcaccgggcc gggcccggcg ctaccggagc
     5161 cggcccggtg gcgccaggcc taccccggcg atcacagcgg agcgaagtcc gcgtccggtc
     5221 agaaaccgaa gcgcaggctg gcccagtacg cgcgacccgg ctcgttgtag gtcgccgcac
     5281 cggcatcgct gctgttggct tcgcggaaca ggcgcttgtc ggccaggttg ttcacaccga
     5341 agccgaagct gaccgtctcg gtcaccctgt agcgcgcgct cacgccccag atgttgtacg
     5401 ccccgcgatc ctgcagcgcg agcgacggat cacaggtgcc ggtgcagcgc ggatcattgt
     5461 tgatgttggt ggtggccggc ttctgcctgc catagaaggt accggtcagc agcagcgaca
     5521 gcttgtcggt ggcctgccag tccagcatgg tgttgatcgt gtacttgggg atcaccgaca
     5581 gcggctggcg cgtggtcttg ttctcgttct ccaccatgta ggtgaagttg ttgctccact
     5641 tcaggcggtt gccctgctcg cccagcagcg ggatcaccag gtttccttcc agcccctgca
     5701 cgatcgcctt cggcgcgttc tcccagcgga agatgcggcc cctgccatcg gcggtcaggc
     5761 cgatctggtc gtagccggcc tggatcttgt ccttgtagtc gttgtggaag taggtcagcg
     5821 acgcctgcca gccactctgc ggcgcccact ccacacccag ttccttgttc aggctggttt
     5881 ccgccttcag gtccgcattg ccgcgcatgt agcagccggc acccaggctc ggcaacgcat
     5941 tcgggcaacc attgccgcgg gtgtagtaca ggtagtccgg attcgactgg tacaggttcg
     6001 gtgccttgaa ggcgcgcgcg atgccgccct tcaccaccca gtcgctgttg atgcggaact
     6061 gcgcgttgag gcttgggctg gtgttgttgc cgaactggct gtggtggtcg aagcgcaggc
     6121 ccggggtgac gatccagcgc tcgcccaggt agatgttgtc ttccacgaac accgcagtgg
     6181 tctgggcatc ggccttgccg cgtgcacggt cggccgacag gccggggaga ccgccaccgc
     6241 tgctgctgga ctggctcatc gagtacggat cggtcaggcg gctgtccagg tattcaaagc
     6301 ccagcgtcca gatgttctcg gcgccgccca gcgtggtcgg gaagctcact tcgccatcca
     6361 gctggtagtt gcgcaggcgc gaggtcgacc agtcggtgcc gttgaagctg ccttccgggc
     6421 caccggccag gccttcattg atgcgcgagt tgttcaccgc ctcgaccgcg gccgtaaccc
     6481 gcgaggtcac gtcgccccag cggccacgat gggtgatcgc accggtgttg cggtacatgc
     6541 ggttggtttc cgccttgccg tcggccagcg cggccagatc gacaccggtc gaggtgccgg
     6601 tggtgctgac ggcgcggtcg ccggcataga tgttgccctg gcggctggtg ccagcctcga
     6661 actcgaccac ctggtcggcg gtcacgtccc agcgcagcag cgcgttgacg tcgcgattct
     6721 tgacgccctc gcggccggcc ggcggcaccg cgttcgggtt ggtcgcgtac tggcggttga
     6781 ggtccagcga atcggcgtcg gtcttgttga ggttgccgta caggcggaac gacagggtgt
     6841 cggtcatcgg cccactgagc tgcaggccga cgcgctcgct gccgccttcg gcgctgtgct
     6901 cgggcaccag gccgtacagg tcgaccgcac cggtcaggtc gccggtcggg cgcttggtga
     6961 tgatgttgac cacgccgccg gaggcaccgg aaccgtagcg ggctgccgcc ggtccgcgta
     7021 gcacttcgat gcgctcgatc atctccgcgg ggacccaatt ggtgtcgccg cgcgtgttgc
     7081 gctcgccgct gcggcccatg cgcaccgcat cgcgtgcgcc gatgcgcttg ccgtcaacca
     7141 ggatcagggt gttttccggg cccatgccgc gcaggtcgat ctggcggttg ttgccgtact
     7201 ggcccgaggc gctgttgccg gtgaggttga cgccgggcat ggtgcgcagc agttcggcga
     7261 tgtcgttggc cggcgggcgc ttggcgatgt cctcggcggt gatggtcgag gtgcccagcg
     7321 cctgccgcgc gatctgcgag gcggtgacat gcaccgtgtc gatatcggtt gcgtcggttt
     7381 cggcctgggc ggtcagggcg ctgcccgcca gcagggcggc aacggcgagc gccagcgggc
     7441 gcggcgaaag aacaacggct cgggacatga tctggacctt ctggcagggc aacggggcct
     7501 ctggcaaagg gcttgaggca acgacgaggg gggaggcgga gcgtcgctgc agtcgcctgc
     7561 ggcccgttcc gtgcgcgcat tctcccatta atgcgattga ttctcaaatg cgttcactca
     7621 ttgcagcagc aggcgcgatg tgctttgcgc accgggcaag cctgcatcgc gcttaaactg
     7681 gccggctcac ccgccatcaa ccgcacgcca ccacggccga taccggtggt ttgccgtacg
     7741 cagccagaga tcgacgtgga atcaccccaa ttggacgatg ccagccagcc gttggccgag
     7801 gcgtggcagc attgcctgca acaggccggc ccggccgcca ccgcgctgtt gcgcgccgct
     7861 gccaccgatg ccccgcccgc gctggcccag cgcttctacg aagtgctgct gcaggatgca
     7921 cgggcacgcc gtttcctgtc ccatgagcag gtcaagcagc gcctgcaacc ggccatgcag
     7981 cgctggctgg tgcagttgct gaccaccgac gccgccggca tcgccaccac cgtcgcctcg
     8041 caacgggtga tcggtgatgt gcacgcgcgg gtcggcattc ccgtcgacct ggtgacccgt
     8101 ggtgcgcgcg tgctcaagca cgagctgttc gtgcgcctgc gcgacactgc acccgacagt
     8161 gccaccgcct tcgccgccat cgactgcctc agcgcgatca tggacatcgc catggaaggc
     8221 atgaccctgg cttacactca tgcgcgcgaa cgctccactc gtgccgatgc ggcctaccgg
     8281 ttgttctcgc tggtgcagaa cgtcagcacc gagcgcgagc gtcagcgcgc cctgctgctg
     8341 gattgggaga acgccctgct gtacgccctg gccggccatg tgcagggcag cgacagtgcc
     8401 agcctggcca gctccgagtt cggcctgtgg ttcacccaca agggcatccc cagcttcggt
     8461 gaaagcagcg agacccagca ggtcgggcag ttgatggcgc gtatcgatga tcgcctgcaa
     8521 caggccgcca ccgacgccac tgcccagcgg ctggccgggc tgccattgat ccgcgaagac
     8581 ctggcagcca tccgcacgct gatgacactg ctgttcgagc gcatcggcga actggatgcc
     8641 ggcagcgacg ccctgaccaa cctgctcaac cgccgtttcc tgccgacggt actgcgcagg
     8701 gagatcgagc tggccacgcg caaccacgcg ccgttctcgc tgctgctgct ggatctggat
     8761 cacttcaagg ccatcaacga cggccacggc catgatgccg gcgaccgcgc gttgcagcac
     8821 gtggcgggcc tgctcggcca gctcacccgc ggcagcgatt atctgttccg ctatggcggc
     8881 gaagaattcg tggtggtgct ggtcgcggcc agcgaatcgc aggccgaagt gattgccgaa
     8941 agcctgcgcc ggcagatcgc acagtcgccg gtggccctgg ccaatggaca ggtactggca
     9001 ctgaccgcca gcatcggcgt ggccggccat gacggccacc ctgattacga gcggctgatg
     9061 gcgcgcgccg acgccgcgat gtacgaggcc aagcgcagcg gccgcaaccg cgtggtggtg
     9121 gccagcgacg cactgcagga ggcgccgggg cgccgcgcac tgcaacgctg aggggtagag
     9181 tcgactgttg gtcgactacc gcgcgcagcg cggggctgtt cgcacgcggg gcgaagagcc
     9241 gcctactgac agtcgactct acagatagtc gactctacgg gctcgcgtgc cagccggcgc
     9301 attgaacgcc accacccgcc acgccgccca ccacagcagc gccatcaatg cgatgcccgc
     9361 ccccagctgg cacaccgcga cccagccatg ccgggcctgt acccagggcc cggccgccgc
     9421 accgatgccg ctgcccaccg cgtagaacag catgtacagc gccaccaggc gcccatgctg
     9481 ttcagccggc gcgcgcagca gcaaggcctg gttcgacacg tgcagtgcct gcccaccgag
     9541 gtcgagcaca accacgccca gcagcagcaa ggacaccgac tgttgaagcc ccagcagcgg
     9601 ccaccaggca agcagcatca acaccagcgc accgaggctg acccgatggg cgaagccacg
     9661 gtccatccag tgccccaccc gcgccgccat cagcgcgccg agcacacccg ccaggccaag
     9721 ggcaccgatg gcggcggtcg accagttcaa cggcggtgcc gacagtggta gcggtgccgc
     9781 tgcccagaac acattgaggc cggcaaacag cagcagcgcc agcggagcac gctcgcgcag
     9841 cgttcgatcc cgccgcagca tgcccagcat cgagcacagc agcgccgacc agcgcggcgg
     9901 tatcgacggc accggaaccg ccggcagccg ccgccacagc acccctgcca gggctgccat
     9961 cagcagcgct gaaagcagat agaccgcgcg ccagccagcg ccggccgcca ccacgcccga
    10021 taccacgcgc gccagcagca ggccgatgaa cactcccccc tgcaccacgc ccacgctgcg
    10081 accgcgctgc tcgggcggcg acaacgtggc ggtataggcg atcaagccct gggtcagcgc
    10141 cgtgcccagc agcccggcca gcagcatgcc cgacagcagc cacactgcgc tgcgtgccgc
    10201 cgccagccac accaacgcca ccaccagtgc catcagctgc aaccgcagca gccggcgccg
    10261 gtcaccgcga tcagccagcg gcagcagtcc gagcagtgcc agcacgctgc cagcctgggt
    10321 agcggccagt accgcgcccg ccaccgcgcg atccagcgcg aacgcctgtg ccagctggtc
    10381 caacagaggc tgggcgtaat agacgttggc gacgctggcg cccgcggcaa cggccagcag
    10441 gaccagcaac ggtcggggaa tggatgcggc catcgtgatt cggttgcaaa ttgaaacttg
    10501 atgcaggcta gcggcattgg ttttaaactg caaccacatt tggaggcacc cgccatgcac
    10561 gctgacagcc cctgccccgt cgcccgcggc gccgacctgc tcggtgatcg ttgggccctg
    10621 ctggtgatcc gcgatgcctt cgatggcgtc agtcgctttg gcgacttcca gcgcagcctc
    10681 ggcgcggcgc gcaacatcct cagcgatcgc ctgcgcaggc tggtcgaggc cggcattctg
    10741 cagctgcagc cggcctccga tggttcggcc taccaggaat atgtgctcac cgccgccggc
    10801 ctggagctgt tcccgctgct ggttgcgctg cgccaatgga gtgaacgcca tcgcttcggc
    10861 gctggcgaag cccactcttc cttgatccag cgtgacaacg gttcagccgt tccctacatg
    10921 caaccgctgg acaacaacag acagccgctg cccgcgcacg ccactgtagt gcgcaagctg
    10981 tagaccgccg catcccccgg atgggggact cgacagggcc accggtgtca aatagcattc
    11041 aatcgcaatt gcacacggtt ctcattgact tcggcgatgg ccgctcctac ctctccttct
    11101 gctgccggcg ctgcgccggc caagcgtgtg gcgcgcgtta acggtcatgg cctgctctgg
    11161 acccgcgggc tgctggcgct gctgggcggt tacgcggtgg ccgcctgctg ggctgccgcg
    11221 ctggcgcgcc tgctgcccgg caccagggcc gatgccacct tggtggcgac catggccgcg
    11281 ttcgtggtct acgccctggc cgccatctgg gcctatgccg cgcgcagcac cctgcgcgcc
    11341 gcactgggtc tgctggccgc gggcgcactc gctgcactga tcgcttggct gctgcgcggg
    11401 aacatcgcat gagcagcgcc gacaacctgg gcggcatccg gcaatcacaa tcggtgctgc
    11461 acacctggtc gggcctggtg gtcggctggg tgctgttcct gatcttcatt gccggtaccg
    11521 cgtcgtactg gaaggaagaa ctgacccgct ggatgcagcc ggaaatcggc ctgcccgccg
    11581 atgccaccac cgcagtgaac caagcccagc agttcctggc ccgcaccgca gccgacgcgc
    11641 agcgctggag catcgaactc cccgattcgc gcagcagcgc caccaccgtc agttggcagc
    11701 cgaagggcga aaaggaacgc cggcgcggcc agcgcaatcc caaccaggcc actctggatg
    11761 ccgacggcac cccggtgcag gtacgcgaaa cacgcggcgg caatttcttc taccgcctgc
    11821 atttcgatct gcactacgtg ccggtgctgt gggcgcgctg gttcatcagt gcctgttcca
    11881 tgctgatgct ggtggcgatc atcagcggtg tcatcaccca caagaagatc ttcaccgact
    11941 tcttcacctt ccgccgcggc aagggccaac gtacctggct ggacggccac aacgcgcttg
    12001 cggtgctgtc actgccgttc catctgatga tcacctacac cggtctgatt accctgatga
    12061 ccctgtacat gccgtgggcg gtggatgcga actaccccgg tggccgcgat gcgttcttcg
    12121 ccgaactgtt cccgcgtgcg gagaaggccg aggccagtgg ggtggccgcg acgccgccgg
    12181 cgctggccga ggtgctgcgc cgtgccgaag tgcaatgggg cggcggccat gcggcctcgc
    12241 tgcaggtcga gcagcctgcc gatgcggcga tgcgcatcag cgtgcgccgc cagcagggcg
    12301 accagatcgc tggcgctgcc gacacgctgg ccttcgatgc gcgcggcaac ctgctggatg
    12361 cggcgccgcc gcgttcggcc gccgtcatca cccgcgacgg catgatcggc ctgcatgccg
    12421 cgcgcttcgc acccaccacg atgcgctggc tgttcttcct ttccggcgtg gccggcacgc
    12481 tgatggtggc caccgggctg gtgctgtgga cggtgaagcg gcgcacccag ctgccggatc
    12541 cggcgcggcc gcacctgggc ttccgcatcg tcgaacgcct gaacatcggc ttcgtcaccg
    12601 gcctgccggt ggcgatgctg gccttcctgt ggggcaaccg cctgctgccg ctggacgtgg
    12661 ccaaccgcag cgatgccgag gtgaaggtgt tcttctacgc ctgggccgcc tgcgtggtgc
    12721 acgcgatgct gcgcccggcc cgacgcggct gggtagaaca actggcattg gccggcgcgt
    12781 tggcgctggg cctgccgctg tacaacctgg tggtctggca gggcggcgcg gtcagtgcgc
    12841 tggccaacgg tgatggcgcc aaagccggca tcgacatcgg cctgctgctg atcggcgcga
    12901 gcctgttgtg ggccgcgcgc aaggtgcacc gtttcgtgcc ggcgcagcgc aagccccgca
    12961 ccgcacgcgc caccacgccg gccgaggcgg gcgcatgagc gtgcttgcac tgctgttggc
    13021 ggccgccgcc ttcgcctgcc tggccatggc aatggaacgc caccaccgcg atgtggccgg
    13081 ccatgcgcca ccaacgccgc gccgtcgcct gctgcaggtg ctgggcgcgc tcgggctgct
    13141 cgccagcctg ttggccagca tcacagcctg gggcgctgca cagggttttg ttggttggtg
    13201 cggcgtgctc gccgcaggtg ctggggccat ggtgctctgg ctcagtttcc gcagcccggc
    13261 caagccggcg ccacgcccgt cttcccgttc ctgaactaga aaggtcaatc catgaagtac
    13321 acgcactctg gcgccctgcg ccggaacgcc ctcgccttgt cgctggcctg cgccgcctcg
    13381 ccgtcgttgg cccaggacac tgcgccggcc accaccgaac tggaccgggt gatggtgacc
    13441 cagcgcaccg agggctacca ggtttatggc accaacaccg ccaccaagct gccgctgacc
    13501 ctgcgtgaaa ccccgcagtc gctgaccgtg ttcacccgcc agcgcatcga ggatttcaac
    13561 ctcatcacga tttccgaagt gctgcagcag acgccgggcg tcaccatcca gtcgtatgac
    13621 agcaaccgca cgctgttcaa cgcgcgtggg tttgccatca acaacttcat gttcgatggc
    13681 attcccacca actacaccac tggcgccggc ggcaactcga tcctcagcga cacatccatc
    13741 tacgaacgca ttgaagtggt gcgcggcgcc agcggcctgg tgaccggttc gggcaacccg
    13801 tcggccacgg tgaacatggt gcgcaagcgc ccgaccgaaa cgttccaggc cagcaccagc
    13861 ctcagcgccg gctcgtggga ttacaagcgc gccgaagtgg atgtatccgg cccgctcagc
    13921 aagagtggcc gcgtgcgcgg gcgcttcgtc ggcgcctaca ccgacaagga aagctgggtg
    13981 cgcttccagc atgacaaatc gcccagcctg tacggggtga tcgaagccga cctgaccgac
    14041 agcacccgcc tgcgtgcggg catcgactac ctgaagaccg gttccgatgg cggcgcctgg
    14101 agcgcctcgc cgctgtactt ccgcgatggc agccgcgcgc acatgccgcg ttcgtacagc
    14161 gccgcagcgc gctggaacga atggaaccgc gaaagcacca actacttcgc cacgctggaa
    14221 cagcagttcg gcgccggctg gagtggccgc ctggcctaca accaccgcgc caccgacacc
    14281 gattcgctgc tgctggccgg ttccaacacc ggcaactggg ccgacccggt caccggcctg
    14341 ggcctgcgca ttgccgatac gtactcggtc tcggaaaccc gcgaagatgc cttcgacctg
    14401 tacgcgtccg gtccgttcca gctgttcggc cgttcccacg aactggtggt gggcatcaac
    14461 cactacgacc gtgacctgga caccatccgc gccggcatca cctcgcgccc gtacagcgtg
    14521 gccgccttcc ccagcatctt cagctgggac ggcaacatcg gcaagccgac cacctacaac
    14581 tacggtattc cgtccagcac ggtgaacacc accgaaaccg gctactacgc cgccgtgcgc
    14641 ctgaatccga tcgacccgct gaagatcatc gccggcgcgc gctattccga ttaccgcacc
    14701 accaccgaca actacaacac cgacggtgtg ttcaccagcc gcagcgcgcg caccaccgcg
    14761 catgagctga ccccgtacgt gggcgtgctg tacgacctga gcagcagcat caccgccttt
    14821 gccagctatt cggacgtgtt ccaggccacc gcgcgccgcg acatcaacaa ccagctgctg
    14881 gaccccacca ccggtggcaa ctacgagtac ggcctgaagg ccgacttctt cggcggccgc
    14941 ctgtacgcgg cgttgaacgg cttctacatg aagcaggaca acgtggccga actggacccg
    15001 aacggtggtg agatcaagct gcccgatggc agttcgccgt acatcgccag ccgcggcatc
    15061 accacccagg gcggtgagtt cgaagtctcc ggttcgatca acgaccactg gagcatgacc
    15121 ggcggctaca cctacagcta cagcagcaac cccgatggca gccgcttcgc cagcaccagc
    15181 ccgatgcacc tggcccgctt caacaccacc tggacccatg gccagtggac gctgggcgga
    15241 ggtgtcagcg tacagagcga gatctaccag atgcagccca ttcccaccgg tcgcttcacc
    15301 gccagcggca cgccggtcac ggccaccggc aagatgagcc agggcggcta cgtgctgttc
    15361 gaccttatgg gccgctaccg catcaacgac aacctgagcg tgggcgtgac ggtcaccaac
    15421 ctgttcgaca aggcctacta ccgcaacgtc ggcttcttca actctggcta ttggggtgaa
    15481 ccgcgccgcg tgctgttcaa cctgcgcgcg aagttctgag caacggcgta gcatcagggg
    15541 cgggccttcg ggcccgcctt ttcattgccc gccaaggaaa cacccgatgc tggaccgtgc
    15601 cctgtcctgc cctgcccgcc tgctgctgac actggccctg ctgctgggca cgcccctgtt
    15661 gcaggcccgc gaggtcgccg caccggccgc ccatgtagaa gccgatggcc cctatgtgtt
    15721 ccgccagggc aaccagctgc aggccaagtg gatctgcacc gacaaggtcg agtcgcacac
    15781 gctttccacc agcgcagcag gcgccgatgt cgcgccgcgc tgcgggtacg cgcacaccgt
    15841 gcacgtggcc gcacccactg cgccctcggt ctccgtgctg ccggcggtgc cgcgcatcgt
    15901 ggcgctgtcc gacatacacg gccaattcgg gctgctggtg cgcctgctgc gcgccaacaa
    15961 agtgatcgat gcccaggacc gttgggcaat gggcaaggac accctggtca tcgccggtga
    16021 tgtgttcgac cgcggcccgc aggtgaccga agcgttctgg ctgctgtatg gccttcagca
    16081 gcaggccgcc gctgccggtg gcgcggtgca cttcgtgctc ggcaaccacg agaccatggt
    16141 gctgtacgac gacctgcgct acgtcaaccc gaagtacctg cgcagcgcgc agctgctcgg
    16201 ccgcagctac ccgcagctgt acggcgcaga ttcggtgatc ggccaatggc tgcgtacccg
    16261 cccggtgctg ctgaagatcg gtgacaccct gttcctgcac ggcggcatct cgcccgaggc
    16321 ggtggcactg gcgctcgatc cggcgcgcac caacgcggcg taccaggcct cgctgggcct
    16381 gcccaaggcc gaagtgaagg ccgaccccgc caccgcgccg ctgtatgacg gcaagaccag
    16441 cccgatctgg taccgcggct atttcgacgg gcgtctcgac acggcgggcg tgcaggcagt
    16501 actggaccgc ctgcaactga agcgcatcgt ggtcggccac acctcgatgc cgcacgtcag
    16561 cagcttccat ggcgaccgcg tgatcgcgat cgacagcagt atcaagaacg gcgagaacgg
    16621 cgagctgctg ttcatcgaga acggcgcgct cagccgtggc ctgctggacg gctcacgggt
    16681 gccgctggca ccgggcgaac ccggcctgca ggactgaatg gcgggacagc gcggcggcgg
    16741 ccaaccgccc cgcgccgctc caccttcacc cggtttgcgg ctaccctcgg cagccgagag
    16801 gcccaccccg tccatccggt gggcctgacc gttacaggag cccccgcgca tgcgcgtatt
    16861 gattgctgaa gacgacccgg acattgcctc cggcctgtgc gcctcgttgc gccggcaggg
    16921 gcatgtggtc gaccacgtcg acaatggcgc gcacgccgat gctgcgctgg gctccaccca
    16981 gtacgcgctg ctggtgctgg acctgggcct gccacaactg gatggccgcg acgtgctgca
    17041 gcgcctgcgc cagcgcggtg atggcctggc ggtactggtg gtgaccgcgc gcgacggact
    17101 ggccgagcgc gtgcgcgtgc tcgacctcgg tgccgatgac tatctggtca agccgttcgc
    17161 gctggacgaa ttcgaagcgc gcgtgcgtgc gcagctgcgc cgggtcacca gcaatggcaa
    17221 tccggacctg cgcatcggcc gcctgcgcct ggacctggcc ggtcaccggg tgtggatcga
    17281 tgaccagtcg ctggaactga ccgcgcggga gttcggcctg ctgtcggctc tggcggtacg
    17341 cgccgagcgc atcgtctcgc gcgcgcagct ggtggaagca ctgtgcgact ggggccagga
    17401 cctgaccgac aacggcctgg acatcgccct gcaccgcctg cgccgcaagc tgcagccggg
    17461 cggcatgggc atccgcaccg tgcgcgggtt gggctacatg ctggaagacg ggcaggacga
    17521 cagcgccccg tgatcagtgg accgcccagc ctgcgccggc gcctgctcgc cttcctggcg
    17581 ttgccgatgc tgggcctgct cgtcttcaat acgatcctgg cctattacgt tgcgctggac
    17641 tattccaacc gcatccacga ccgcaacctg atcgacgata cgcactcgtt cgcgcagatg
    17701 ctgagcacca tgccggtgac cagtgacctg tcaccgcagg cccgcttcct gatcgaatac
    17761 gatcccgacg gccatcgcta tttcaacgtc gacagcagcc gcaagggcac cctcagcggc
    17821 aacgccgact tcagccctta cgcgccgtcg caggactgcg cgggcgtgca tccggcgctg
    17881 tatgacggca acctcaacgg ccagcaggtg cgcatggcca ccgtctgcac ccaggcgatg
    17941 aacgatccgc aggaccagct ggcggtgacc gtggccgaaa gcatggccga ccgccgccag
    18001 cgcgcgcgcg agatcctgat gatcatcatc ccgctgatga ccatgctggc gctgggcacc
    18061 gccgcgctgg tctggttcgg cgtgacctac ggcctgcgca tcctgacccc gctgaggacc
    18121 cgcctggcac agcgccgcgg cgaactggcg ccgatctccg atgccgacgt gccggaagag
    18181 atccagccgc tgatcagcac catcgacgat ctgttcgcgc gccaggccga gatgatcacc
    18241 ctgcagaacc gcttcatcgc cgatgccgcg caccagttgc gctcgccgtt ggccggcatg
    18301 gccctgcacg tggaccaggc gctggcgcat ggcgacccgg acaccgtgcg cgaagccctg
    18361 cagcacatcc gccggctcaa ccagcgcacc gcccgggtca gcacccagct gctggcgctg
    18421 agccgggcgc agaccgtgcc ggacacggtg gaagcgctgg acctgtgcga actggtcccg
    18481 caatgggttg gcatgcgcgt gccggaggcg atccgcgatg gcatcgacct cggctaccgc
    18541 ggcggcaacc agccgctgcg cgtgctcggc aacggcgcca tgctgcagga ggcgctggac
    18601 aacctgatcg acaacgccct gcgctatgcc ggtcgtgatg ccaccgtcac ggttggcgtg
    18661 cacgcgctgg atgacaatga cgtcgaactg tacgtggaag acaacggccc cggcgtgccc
    18721 gaggacgtga tgccccggct cggcgaacgc ttcttccgtg cccccggcac cgccgccagc
    18781 ggcaccgggc tggggctggc catcgcccat gaggcggtgg agcacttcgg cgggcgcctg
    18841 gccttcctca accggcccgg cggcgggctg aaggtggcca tcacgctgcc gctgctgaag
    18901 gccccctgac ccggcccggg gcgttgaaag gctggtgaaa atcgcgcttg cgatcctgcc
    18961 atccccactg ccccccggag ccgccaggtg accgaatcgc acgacttctt cctccccggt
    19021 ggcccgcagg gcgtgctgct ggtgcatggc ctgaccggca ccccggcgga aatgcgcatg
    19081 ctgggcaagg gcctgaacaa cgccgggttc accgtgcatg gcgtgcagct gcccggccat
    19141 tgcggcaccg tggatgacct gctggcgacc acctgggagc agtggtacca gggcgtggaa
    19201 gatgcggcgg ccgagctgcg cggcaaggtc gaccagctgt tcgtcggtgg cctgtcgatg
    19261 ggcgcggtgc tgtcgctggc actggccgcg cgccgccccg agtgggtgtc aggcgttggc
    19321 gtgtacggcg ccaccttccg ctacgacggc tggaacatcc cggccgtggc ccgcctgtcg
    19381 ttcctgctgc cgtggttcaa gcgcttcaac atcggccgcg accgcatgtt catggaagaa
    19441 ccgccgtacg gcctgcgcga cgagcgcctg cgtgcgcagg tcagcgccgc catgctgtcc
    19501 ggcgacagcg ccgccgccgg ccttccaggc aacccctggc atgccctggc cgaaatgcgt
    19561 gcactgagcc actggacccg ccgccacctg caccaggtga ccgcaccgtg cctggtgatg
    19621 cacgcccgtg aggatgatgt ggccagcatg ggcaatgccg aactggtgat gtcgcgggtc
    19681 agcggcccga aggaactggt ggtactggaa gacagttacc acatgatcac catcgaccgc
    19741 gaacgtcgcg acgtcatccg tcgcagcgcg cgtttcttca ccgaaatcgg tgagcgcagc
    19801 ggcgtgctca aggcggtggc ctgagatggg ggcactcgcc accctgctgt ggctggccaa
    19861 cgtcgtgctc gataccggtg gccagctcgc cttcaaggct gcggccagcg acccgcagga
    19921 cggcgaaggc ctgcaacgct ggaaacacat gctcagccgc ccctggctgt ggatcggcat
    19981 cgcctgctat gtgcttgagt tcgtcgcctg gatcgccttc ctgtcactgg taccgctgtc
    20041 caagggcgtg ctgctgggct cgatcaacat cgtggcactg atgatcgccg gccgcttcct
    20101 gttccgcgag aaactcacgc cgttgcgggt caccggcatg ctgctggtta ccgccggcgt
    20161 agccgtggtg ggggccggct catgaggcgc ctgtatgtga tcggtttccc gctgctgatg
    20221 gccttcgaca cattggccca gctgtgcttc aagtatgccg gcgatgccgc gctgccggtc
    20281 gaagccaaca gcgcgtggct gctgcgcgtg ctgtcgcagc cgtgggtcta cggcgccatc
    20341 ctcggctaca tcggtgcctt cttcacctgg atgagcctgc tgcgccatgc gccgatcggc
    20401 ccagcattcg ccgcttcgca cctggaagtg atcagcgtgc tgctgctgtc ggcctggctg
    20461 ttgaacgagc cactgaccct gcatcacctg gtcggcgcgg tactgatcgt ggccggcatc
    20521 gtctgcctgg gccgtgccga agcagacgac ccgcacagcc ccgccgaaag caccgcgtga
    20581 gcgcgttgcg atgagcctgt tcgcgcgcga actgccaccg accgcaggcc tgccgatgca
    20641 ggccagcgac ttccttcccg gtggtggcga cctgcgcgac atcctggccc gacagctcgg
    20701 cacaccgccg ctgcagctga cctgctccgg tacccacgcg ctgctgatcg cgctgcgcac
    20761 cctgcgcaag cgcgcgccca atcgtgacac cgtgatcctg ccggcctaca cctgcccgct
    20821 ggtgccgatc gcggtgcaca gcctgggcct gcgcgtgcag ctgtgcgata cccgccacgg
    20881 ccacttcgac ttcgatcccg gccagctcaa gcggctggcc gatgcgcgca cgctggcgat
    20941 cctgccaacc cacctcggtg gccgcatcgc cgatgtcgag ctggcctgcg agattgcacg
    21001 cggcgcgggt gcctgggtca tcgaggatgc cgcgcaggca ctgggtgcac ggatcggcaa
    21061 cagcagtgtc ggcctgcgcg gcgatatcgg tttcttcagc ctggccgccg gcaagggatt
    21121 gagcctgcac gaaggcggcc tgctggtcag ccgcgacgac gagctgcgtg ccgcgctggc
    21181 cggacatgct gccgaacagg tacgtttcag cctgcgctgg gagctgctgc gcagcgtgca
    21241 gctgctcggc ctggcggcct gctaccgacc ttcgctgctg tcgctggtat acggcaatcc
    21301 actgcgcggc gcgctgcagc gtggcgacct ggaagaagcg gtcggtgaca ttttcccgct
    21361 gcagattccg cagcaccggg tcagccagtg gcggcagaac atcggtgcca atgccgcacg
    21421 gcgcctgccg gccttcctgc aggccggacg cctgcgcgcg ttgcagctgc gcgtgcagct
    21481 ggcccagctg ccagcggtgg aggtggtcga tggcctggcc ggtaccggtg gcacctggcc
    21541 gatgctgatg ctgctgctgc ccagccaacg cgcccgcgat gcggcactga aaaacctgtg
    21601 gccgcgcggc ctcggcgcca gccgcatgtt catccatgcg ctgcccgact acgtctacct
    21661 gcgcggcatc gtgccggcca ccgacgtgcc caacgcacgc gacttcgccg cacgcatgct
    21721 gactctcggc aacagcgcct ggcagacccg tgaagacacc gcggaaatcc tgcgggcgct
    21781 ggctgatgcc caagcgtgaa agccgctcct cccgggcgtt tcgcgcattc agcaacgtca
    21841 cttcctgaac gctttccccg cccggaaatg aaggctttca acaggaaagg aacgagaaag
    21901 gcggcctgcc tacattgagc ctgccccggc accgtgccgg acgcctttcc catcgacgga
    21961 cctgcccatg cactggagca tcctgtgtga cttcgacggc accatcagcc tcgaagatgt
    22021 catcgactcg ctgctggaga agtacggcca gccgggctgg caggaactgg aagaacagtg
    22081 gaagtcggga aagatcggct cgcgtgaatg catgcagggc caggtgcggc tgctgaagct
    22141 ggacccggcc acgcttgatg cgcacctgga ccaggtgcag atcgatccgg gcttcactgc
    22201 cttcgtcgcc cgcgccgagc agctgggcct gccgctgcgc atcgtcagcg atggcctgga
    22261 ctatgcgatc caccgcatcc tcgccaacca cggcctgtcg cggctgccgg tggtggccaa
    22321 ccacctgcgc tggtgcgaag accactggga actggaatcg ccctaccagt ccgaagggtg
    22381 ccgcagcggc acctgcaagt gcacctgcgc tgcgcaggca cgtgccaacg aagcaccgcg
    22441 cgtgctgatg atcggcgacg gcagttcgga cttctgcgtg tcggaggatg ccgacttcgt
    22501 gtttgccaag cgccgcctga tcacccattg cacccatgcc ggcatcgaac atgccgcgat
    22561 cgataccttc cacgatgcca tcgcgctgtt gccgcgcctg cttgatggca gcctgctgca
    22621 gccacgtcgc atcgacgcca gcccgcagcc cactgcactg cccctgctgc tggccaccgc
    22681 ctgagcacct ccttccagac ccgctacccc gttgccccct ttcgaacgtc cttcacggaa
    22741 ccgaactgca tgaacatttt tgacaagaat gccgacgccg ctgcctccga tgcgcagctg
    22801 ctggccgacg aagcccgcta cagctccttc ggcgacaccg tccactacgt cgacccgccg
    22861 aagatcttcc agcgcggcga aggcagctac atgttcgatg gtgcgggcgt gccctacctc
    22921 gacctgcaga tgtggtactc ggcctgcaac ttcggctaca gcaacaagcg cctgaacgat
    22981 gcgctgaagg accagatcga caccctgccg caggtcgcca gccagtacct gcacccgacc
    23041 cgcgtgcagc tggccaagac cattgccgtg gacatgcacg agaagttcgg cctcgacggc
    23101 cgcgtgcact tcaatgtcgg cggcgcgcag gccatcgaag actcgctgaa gatcgtgcgc
    23161 aacgcgcgcg gcggcaagag cctgatgttc gccttcgaag gcggctacca cgggcgcacc
    23221 ctgggtgcct cgtcgatcac ttccagctac cgctaccgcc gccgctacgg tcatttcggc
    23281 gagcgcgcga tgttcatccc gttcccgtac cccttccgcc gcccgaaggg catgaccccg
    23341 gacgagtatt ccgaccactg cgtgtggcag ttcgagcgcc tgttcgaaag cgaatacaac
    23401 ggcgtgtggg atcccaaggt cggccaggcc gagtacgccg cgttctacgt cgagccgatc
    23461 cagggcaccg gcggctacgt catcccgccg cgcaacttct tcaccggcct caagcgcgtg
    23521 ctggacaagt acggcatcct gatggtcgtc gatgaaatcc agatgggctt ctggcgcacc
    23581 ggcaagctgt ggtcgatcga gcacttcggc gtgaccccgg acgtgctggt gttcggcaag
    23641 gcgctgacca acggcctgaa cccgctgtcg ggcctgtggg cgcgcgaaga gctgatcaac
    23701 ccgaccgtgt tcccgccggg ctccacccac tccaccttca actccaaccc gctgggcacc
    23761 cgcctgggcc tggaagtgct gaagctgggc aaggagatgg actacgagcg caccgtgccg
    23821 gaaaagggcg cgtacttcct cgacggcctg cgtggcctgc agaagcgcca cccggaaatc
    23881 ggcgacgtcg acggcctggg cctggccctg cgtgcggaaa tctgccagac cgacggctac
    23941 acgccgaaca aggaactgct ggaccgcatg gtcgacatcg gcctggccgg tgacctgctg
    24001 cacgacggca agcgcatggg cctcgtgctc gacgtgggtg gctggtacaa gaacgtgatc
    24061 accttcgcgc cgtcgctgga catcagctac gaagagatcg acctggcgat caccctgctc
    24121 gaccaggcgc tgaccaaggc caagggctga ggtcgatgcg ctgccggttc ccgtgccgat
    24181 ggagatgacg tcacgtgcgt ccagcactgc gctggaaccg gccgcgctgc tggagggctt
    24241 cctggcccac ccgccgctcg gtttcgaggc aagccgcctg cccagcggcc tgccgacctt
    24301 ccgtgcgccg ctggacctga ccaccacgat ggacgacgca ctgcgcggca agctgcttgg
    24361 cctgccgctg tcgcgcctgt ggcggccctg gatcacctgg cagacccgct tcgtcggtgc
    24421 caccagcacc gagtacaccc cgctgccggc gcacgtcgcg ccggaggcgc tggccgagga
    24481 cgtgacgcgt cacgcgatcg gcgatacccg gctgctggtg gtcaaggacc tggcgatcga
    24541 ttcaccgctg ctggacgacg ccgccaatgc acacagcggc gccttcctgc aggcgctgct
    24601 ggcacgtggc ttcgttgaac tggaaggcat gccgctggcc tgggtggcga tcgatttcga
    24661 ttcgctcgac ggctatctcg gccgcctgtc gtcttcgcgt cgcaagaaca tccggcgcaa
    24721 gctgcgctcg cgtgatgacc tgcagatcga ctgcatcgcc agcggtgatc cggcgctggc
    24781 ggacccgcag ctgcaggccg aactgtatgc cctttacctg ggcgtatatg cgcagagcgc
    24841 ggtgcatttc gaccagctcg acctgcccta cttccagcac ctgctggccg acagccaggg
    24901 ccaggggcgg atgttcctgt accgccacca gggccagctg atcggctgga acctgtgcta
    24961 cgtgcacgcc ggcaagctgg tggacaagta catcggcctg gcctacccgc agtcgcgcga
    25021 gcacaacctg tacgcggtca gctggatgca caacctcgaa tacgcgctgc agcacggcct
    25081 gagccattac gtggccggct ggaccgactc gcggatcaag gccgaactgg gtgcgagctt
    25141 cacttccacc cggcatgcga tccacgcgcg ctcaccgctg ctgcgcgccg ccctgcgcag
    25201 gctggcgccg catctgcagg gcgagcctga tggaggcggt tgaacgatgc cgttgcgttc
    25261 cccgctgatc ctggacctgg atggtggcgt gctgccgctg ccccaggcgc agaccctggc
    25321 tctgccgcag tggcacgatc cgctgcgctt tgcctgcagc aatgccacgc tgaaccgctt
    25381 cgctgctgac gtgctggccc cgctgccggc ccagctcggc acggtcatgc ttggcagtgg
    25441 cgatttccat cacctcagcc tgccgctgct gcagcgcatg cgcccgcagg caccgttcca
    25501 gctggtggta ctggacaacc accccgacaa catgcgcttc ccgttcggca tgcattgcgg
    25561 atcgtgggtg aacgccgcca gcaagctgcc gcagatctcg catatccatg tgctgggcat
    25621 cacctccagc gacatcggcc ttggccatgc ctgggagaac cattggcgcc ccctgctggg
    25681 cggtcgcctc acgtactggt gcatggacgt ggacgtgggc tggggccatc gcctgggcat
    25741 gggccgcgcc ttccgccgtt tcgaacatcc cgaggcactg gtcgctgcgt tcgctgccga
    25801 gcaggccaag tcgccgcaac cgacctacct gtccatcgac aaggatgtgt tcgccgagga
    25861 cgtggcccgc agcaattggg accagggccg tttccagctg gaagacgcgc tggtggtgat
    25921 cgaggcgctg cgcgccggcg gcctggtcgg cagtgacatc accggcgaag tgtcgctggc
    25981 caactaccgc agccggttca agcgctggct gtcgtcgctg gatggccagc ccgacatccc
    26041 tgccgacgat cttcccgtat ggcaggcgcg ccaccagcag gtgaaccgcg aactgctggc
    26101 ggcgatggct gcggtgccga cggcctgctg accgcttgcg gtcgcgtcgg ctgccggccg
    26161 gcactacact ggacgcctac ccccggagac gccgccatgc cccagaccgt catcccgcaa
    26221 ctgcgcatgc gccatgccga cacctccctg ccgttctacg tgcagggcct gggcttcgtg
    26281 gtcgactggg aacaccgctt cgaacccggc ttcccgctgt tcgcccagct cacccgcgac
    26341 ggccagaccc tcttcctcac cgaacacacc ggtgattgcg aggtcggcgg cgcggtgtac
    26401 ttcatcgtcg aggatgtcga tgcgctgcac cgtgccttca gcgccgcgaa cgtgccgatc
    26461 gagcagccgc cgcatgacac cgaatggggc agccgcgaga tgctgctgcg tgatcccgac
    26521 ggcaaccgcc tgcgctttgc cacccacgca gactgaaccc cagcggcttg agccgaatat
    26581 acgaaacata tatgcttcgt atatccacta ccccaggacc gccgatgggc atcgtcaaca
    26641 tcgatgacac cctgcacgac cagctgcgcc gtgcctgtac cgtctccagc cgctcgatca
    26701 acgcccaggc caacttctgg atccgggtcg gcatgctgtg cgagatgaat cccacgctga
    26761 gcttccagga catcgtcgcc agcgaactgc gcgcggccgg cgtacagcca caggcgctgg
    26821 cgcccgggcg ggcctgacat ggcgatgatc aagcagccgc acgaaatcgc gctgatggcc
    26881 gaatcgggtc gcctgctggc gcaggtgttc gccgcgctcg accggctgcc gctgcagggc
    26941 cgcagcacca tggaaatcaa cgatttcgtc gagcgcatga tcgtcgatga actgcaggca
    27001 aggccggcca gcaagggcca gtacggtttc ccgtatgtgc tcaacacctc gatcgacaac
    27061 gtgatctgcc acggcgtgcc cagcaccacc gacgtgctgc gcaacggcca gatcgtcaac
    27121 ctcgacatca ccctggagaa gaacggctac atcgccgact ccagcaccac ctacctggtc
    27181 ggtgaggtcg actatgccgc gcgccggctg gtgcagacca cctaccaggc gatgtggaaa
    27241 ggcatcgcca cggtgcgccc cggcgcgcgc ctgggcgaca tcggccacgc catcgcccgc
    27301 cacgcgcgca gccatggcta cagcgtggtg aaggaatact gcggccacgg catcggccag
    27361 gagatgcacg aggaaccgca gatcctgcac tacggtcatc cgaacaccgg catgacactg
    27421 gaagaaggca tggtgttcac catcgaaccg atgctcaacc agggcaagcc ggccatccgc
    27481 cagcaaccgg acgaatggcc ggtgtatacg cgcgacggca agctgtcggc gcagttcgaa
    27541 cacaccgtgg cggtcaccgc cagtggcgtg cgcgtgctca ccctgcgccc cggcgaagcg
    27601 ccattgtgtg cggtggatgc ggcctagagc gggcgcaaca gcagcagcgt ggcgaggcag
    27661 aacatgaaga ccgccacccc tgcgtccagc acgcgccacg cagccggcct gcggaacacc
    27721 ggctgcaaca ggcgcgcgcc atagcccaac gtgcagaacc aggccacgct ggccacgcag
    27781 gctccggcgg cgaaggccca gcgcagatcg ccggggtaac gcgtggacaa gctgccgagc
    27841 agcaccaccg tatccagata gacgtgcgga ttgagcagcg tgaacgccag gcaggtcaac
    27901 agtacctggc gcccgctgcc accctgcgtc tcggcggcgg ccaaggcact gccaccgtgc
    27961 caggcgcgca atccggcctg cagtccatac cagagcagga acgccgcacc gccgaagcgc
    28021 agcacctgca gcagcaacgg ccactgctgc accaacgccc ccatgccgcc aacgccggcc
    28081 aggatcagcg cgatatcagc gccggcacag gccagcacca ccgttccgac atggcgacgt
    28141 tgcagcccct ggcgcaggac gaaggcattc tgcgcaccga tggcgatgat caggccggca
    28201 cctgcgaaca ggccagcggt ggtagcggcg atccacatca ggaaggccca ggcagcgaag
    28261 ggacgcgcag ggtgcggcca ttgccgcgtt aagacaatct gatttttctt tatcctgtgc
    28321 agaaaaactg aaggggcgcc tgcatggatc tggtacaccc gcaactggcc gcgtttgccg
    28381 cggtgctgga ggaaggcagc ttcgaggctg cggcacgccg tctctcgatc agcccctcgg
    28441 cgctgtcgca gcggatcaag gcactggagg accggctcgg ccaggtcctg gtggtccgcc
    28501 aggcaccgtg ccgccccacc gccgccggtg aggcattgct gcgccgcgtc cgcccgatgc
    28561 aggcactgga ggccgaggcg ctggccgaac tgctgcccga gcgcggcagc gatgccgcgc
    28621 gcacaccgat cccgctggcg atcaacgacg actcgctcga tacctggttc gtaccggcca
    28681 tcgccgaact gcaccagcgc cacggctacc tgttcgacct gcgcatggat gaccaggacc
    28741 acaccctgca gctcctgcgc gatggcagcg tgctcggcgc ggtcaccgcc gaaggccaac
    28801 cggtgaaagg ctgcaacgtg catccgctcg gcgccatgcg ctaccacgcc atcgcctcgc
    28861 ccggcttcgc ccgccagtac ttcagcgatg gcatgcaggc cgccgccttg gcacgcgcac
    28921 cgatgctggt gttcaatcgc aaggatgaac tgcaatggcg cttcgtgcgg cggctgaccc
    28981 gcgcgcgcct gcagccgccg ctacactacc tgccctcctc caccggtttc gtcgaagccg
    29041 cagcgtgcgg actcggctgg ggcatggctc cggaaaccct ggtcgcgccc gccgtgcatg
    29101 ccggccgcgt ggtggtactg gaaccccgcc gctggctgga tgtgccgctg tactggcagc
    29161 atgccgccgt gcgctcaagc acgttgcagc acatcaccca ggcgctgcgc agcgcggcca
    29221 gcggcaccct tcgctgagga ccacacgatg accgcagacc cgggcttcac accgcgcgca
    29281 ctaccgtttg cgcacttctt caccattggg acggcatggg cgtgatcggc cgacgtacaa
    29341 ggatgctccg cgcaaaggcc gcgctggcgc tgacgctggc aacctgcctg cccatcactg
    29401 cgtcggcgca gtccatcacc gacgcaccgg cattggactg ggaacaggca cggcagcgat
    29461 tggaacaggt ctccgatgcg ctggccgccg cagacgccgc cgtgcgcaac aagcaggacc
    29521 tgcaggacgc cacccgcctg ctgcgcctgc cggagatcac cggcgaagta cgccgcctgc
    29581 agttccagaa gaccctcacc ctgccactgg gctcgctggc gccggtggcc gaagccttcg
    29641 gcatcgactc gcccctgtca ttcaccgaac gcgactggcg cacccgcccg gtggtgactg
    29701 cggtgctgcc gctgtacacc ggcggggtga tcccggccgc gcagcgtgcc gccagcgccg
    29761 cccacgaaca ggccagcgcc gagcgcgaag cacagcgcca atcgctgacc gtgcagcttg
    29821 cccaggccta cttcggccag cgcctggccg aacaggcggt ggatgtacgc cgcgacgtgc
    29881 gtgatggcct caaccgccac ctgtccgacg cagagaagct ggaacgcgag ggcttcgcca
    29941 cccgcgcgca gcgcctgcag gctaccgtgg cccgcgacaa ggctgagcgc gagtaccaga
    30001 agaccgtcaa cgatctggcc acattgaagg ccgctctgtc cacgctgctg cgcagcggcg
    30061 gtgaggtgca gccggtatca ccgctgttcg tgcagcgcgc gccgctggag ccggtcgccc
    30121 gcttcgaacg caccgcgcag gcccgccagc cccagatcgc gcgcctgcgg gcgatggtgg
    30181 cgcaggccga acagggcgtg cgcgtgcagc aggccaagct gaaaccgcag atcttcgcct
    30241 tcggccagta cgacttccgt cgtcgcgatg aaatgctgac cgatccggac tgggccttcg
    30301 gcatcggact gaagtacacc ttcctgtcgc cgaactcgcg gccggcgcag atcagcgccg
    30361 cgcgtgcgca gcaggagcag gccgaagcgg gcctgcgcga agccgagaac caggttgcac
    30421 taggcgtgcg caaggcctgg aacgaactgg agaccgcccg ccagcagttc gtgctgctcg
    30481 acagcagcat tgcccaggca caggaaaacc tgcgcctgca ggagctggcg ttccgcgaag
    30541 gccaggccac ctcgctggat gtgatcgacg cgcggctcgg cctcggcggt gcccgcgtcg
    30601 agcgcgcaca ggccgcctac caatacgatg ttgcactggc acagctgctg gaggtcagtg
    30661 gacagatgga ccgtttcgaa gagttccggc ggcgtgcgga cgaggtgatc gaccatgagt
    30721 gatgtgctgc acgacgatgc gacgacgccc cccggcaagc gccggctggg accgatcctg
    30781 atggtggtgc tgctggtggt ggtggtgctc ggcctgtggc tggcctggcg cagcccgggc
    30841 gaccagatcc agggcatggc cgatgcggac accatcaacg tggccgccaa gatcaccgcg
    30901 cgcgtggccg agctgaaggt gcgcgagggc gaccgcgtgc agtccgggca ggtgctgttc
    30961 ctgctcgaca gccccgaggt ggccgccaag gaacagcagg cacacggcgc cctggccgcc
    31021 gcgcaggcgg tggccgacaa ggccgatgaa ggcgcgcgca gcgaggacat ccgcgccgcc
    31081 gaagccaact ggaagcgcgc cgaagccggt gcgacgctgg ccgaggccac ttaccagcgc
    31141 gtgcagaacc tgttcaacga gggcgtgatg acccggcaga agcgcgatga agcgcatgcc
    31201 caggccacca gctcgcgtga actggcgcgt gccgcgcgcg cgcagtacga catggcgctg
    31261 tctggcgcgc gcgagcagga caagcgcgcc gcgcagggcc aggtgcagca ggcgcagggt
    31321 gcggtggccg aagtcaacgc cgcgcgcgcc gaagtggaag gccgcgcccc ggtcgcgggc
    31381 gagatcaaca agcgcatggc cgacccgggc gaactggtgc cggccggcta tccggtgttc
    31441 accctggtcg acatcgaccg catgtgggtg gcgatgaacc tgcgcgaatc gcagatgcag
    31501 ggcctgaagg tcggcagcaa gctgcgtggc agtgtgccgg cgctcggcca ggacggcgag
    31561 ttcgaggtct acttcatcaa ccccgctggc gattacgcaa cctggcgtac cacccgccag
    31621 tcgtccggct acgacgtccg cagcttcgag gtgcgggtgc gcccggtacg ccgcatcgag
    31681 ggcttccgcc ccggcatgag cgtgctgttc gcatggcccc agcactgagc cctgatggcg
    31741 gcggcttcgc cgcttcctgg cggcgcgagc tgcggtcgtt gcgcggcaac cgtgccgacc
    31801 tgatgctggt caccgtgctg ccgctgctga tgctggtggt gatggcatgg atgttcaccc
    31861 cctcggtgat gcgcgacatc ccgatcgccg tggtcgacct cgaccacagc agtgacagcc
    31921 gcctgctgct gcgcatgctc gatgacagcc cgggcgtgcg catcgccagc cagccagccg
    31981 acatcgagga cgcacgttcg cagctgcgtc gcctggacgt gttcgcgatc gtgctggtgc
    32041 cgcgcgacgt tacccggcaa gcgctgcgcg ggcgccaggg cacggtgttc gcctattaca
    32101 acgccaccta catgaccaca ggccagtccg ccgcgcgtga tatcggcgat gcggtctcgg
    32161 cctggaacgc acgcctgctg cgcgagcgca tcggcctgca ggtcggcccg ggcaagctgc
    32221 gtgcggcacc gatcgcggtg cagtcggaca tcctctacaa cccggcacgc agctacgagc
    32281 tgttcctgct gccgctgatc ttcccggcgg tgctgtcgct ggtgctcgcg cttgccgtag
    32341 ccggcagcct tggccgcgag atccgcgatg gcaccctgcc cgactggctg cgccgcacgc
    32401 cgtgggccgc catcgccggc aaggctgcac cgtacatcct gctgttctcg ctgtacggtg
    32461 cgctcgggct cggctacctg gcctggctgc gcggtgatgg cgtggccggc agcgtgctcc
    32521 tgctgctgct cgcacagccg ctgttctacc tggccacggc cgcctacgcg ttgttcttcg
    32581 tcggcgtcac ccgcgacatg ggcaccgcgc tgtccgcagt cggcctcagc atcggcaccg
    32641 cattggcgtt ctccagcgcc accttcccgg tgctggacgg ccccctgttc acccgcatct
    32701 ggcatcagct gctgccgctc agtgcctaca tcaagctgca gacccagcaa cagttcatcg
    32761 gttcaccgct gctggtttcg ctgtggccgt tggccacgct gctgctgatg tcggtggtgg
    32821 ccggcggcat cggtggcctg cgcctgatcg ccttcgcgcg cacgcctgac gctgtgcagc
    32881 cggcgagggc cgacgcatga gcacgctctg gcgcagcctg cggcagaccc tgatggcggt
    32941 gctgtgcgac cgctatgcga tcgtggtgat ggtcggcgcg gtgatcctgt attcgttctt
    33001 ctacccggcg gcgtaccgcc accaggtggc cggcaacctg ccggtgctgg tggtggacga
    33061 agaccacagc gccaccagcc gcgaactgct gcgaaagctg gacgcgctgc gggtcgcacg
    33121 cgtggtcggg caaccggccg acatcgacag tgcgcgccag cagctggaag ccggccacgc
    33181 cgaaggcatc gtgctgattc cggccaacct ggagcgcgac atcctgcgcg gccaccccgc
    33241 caagctggtg ctgctcggca acggcgccta cctgggccgt gccagctggg tgctgggcag
    33301 cgtggccgat gcactgggcg cgttcgggcg tgaggcggta gtcggccagg cggccttcat
    33361 gggcgcaccg caggcaccgc cggtcaccct ggtgcagcgc ccgctgtaca acacccagga
    33421 aggctacggc agcgccatcg tccccggcgt ggccgaactg atcgtgcacc agaccctgct
    33481 gatgggcatc ggcgtcctgc tcggcggccg tcgtctcgcg ctcggccggc gcctgcgctt
    33541 cgacctgccg accctggccg gcatggcact gggcttcggc ctgatcggcc tgttcggcct
    33601 gttctactac gccggcttca ccgcctgggt gcaggactat ccacgcggtg gcaatccact
    33661 gggccagctg ctgggcggca ccctgttcat cgccgcgacg gtggcgttcg gcctgttcgt
    33721 cggcagtttc ttccgcaccc gcgaacgtgc gttccagtac atcatcgcca cctccatccc
    33781 gctgttcttc ctggccaacc tgtcctggcc ggcagtgatg acgccacgcc cgctggtgtg
    33841 gctggcgcag ctgctaccaa ccacctcggg catcaacctg atggtgcgcc tgaaccagat
    33901 ggacgcccgc ctgaccgaag tcagccacga actgatcacc ctcagcatcc tgctgctgct
    33961 ctacggcagc ctcgccgcct ggcgcctcct cgcaaaaaag gggacggagg ggattaagtc
    34021 gtaagcggcc ggattggcgg attgcgactt aatcccctcc gtcccctttt caggggtctg
    34081 gcgcgtacca gaacgggatg cggtactcgc gacgtcgctc cgggccgcgt tcgccacctt
    34141 cggcattcca gaccaggttc agatcatgcc gaccgggtac caaccccgcc atcggcaggt
    34201 atccgaccaa gccgcgcatg tcgacatcac ggcgttccat cggcatgaac tcgtgcaggt
    34261 cgaccggcgc gccatccaac tgcacctgcc acagccgcga caggcactcc accgccgcac
    34321 tggcagcctg cgcgcctacg gcttcgttgc gcgccccggg cagcgcactg caatgctggc
    34381 gtgccaacgg gttgtcgcgc tggggacgat gcggaatgaa cacgcgcagg cgcgaaccgg
    34441 tgatcgtgtc ggagggaatc atcgggtacg ccaacagctg atcgtgtgcc gagcgcatcg
    34501 actcgtaatg cgcgctcaac atgccgtgtt cgacagcctc gtcagtcatc acctggtaac
    34561 ggttgaacag cgaaaacttc accgaaccca gtacctggac ggctcccagc accatggcca
    34621 ccaccacggc gagcagatag accgccatga atgaacgcga gcgcaggttg ctctgcaggg
    34681 tcagctgcat cgtctgcatc tggcgcagca ggggaatccg ctgcaggccc gccaggaagc
    34741 gctgcagcca gtgctgcagg ccctcatggg cctggttgcg ccgctgccta cgcgcaatga
    34801 cgcgctccag cagcgcgggc accagcgcga gtgcaagcaa gccggtcagg acgctaatga
    34861 ccacgatcat gacaacacgt tctgaaccgc cggcaagcgc actgatcgcc atcgccacgc
    34921 acagcgtcag cacggccatc accagcgttc cggccagcgt ctgcacggcc aacagcgtgg
    34981 tggagaagag catggtggcc aaacgatcag cgcgctcgat gctgccatcc aggccaccgt
    35041 cgcgggcctt gaggaaggcg cgcgataccg ggcccatctg cggaagccgt tgccagtcga
    35101 tgcccttggg gaagtgcgat ttcagcccga tcaggcctat ccagtagccg cgcacggtca
    35161 ggtgcgcgat cagcgccact gccaacacgt agcacatgcc cacgctgatg ctgaaaccaa
    35221 accacagtag ttggaagtaa atgccttcgg tatgcaggct gctgcgcgcc caggcatcga
    35281 acagatagcc aggaaccgcc aacagtgcaa acgccagcag gccggaaatg aacaattcga
    35341 gctcgtcggt acgctcacgc agtcggccga agcgcgctgt cgcttccagt actggatcga
    35401 cctcggcaac cggcgtgtgc gactcagtca ggggtgattc gttcacattg cgttcatcca
    35461 ttgaagtcgg cgcagtatag acaccgcgct gcagcccgcg atacagggcc gttcaacgac
    35521 gaacgccggc acagggccgg cgttcgagga catgcgtact gcgaaatcct gtggaaggaa
    35581 gcgctaccgg tgcagacaat cagcggtaaa cacgctcgca gcggcgttcg accacgcgat
    35641 caccgttctt ctgctggctg ttgccctgga tctgccggcc cgcggcgcca ccggcgacgg
    35701 caccggcgac ggtggccagc ttcttgccgt tgccgccgcc cacctggttg ccgagcaggc
    35761 caccaatcac cgcgccggtg gccgtaccgg caatacggtt ggggtcacgc gaattgcgtt
    35821 gcacttccac gttcttgcag accacgcggc tgccatcgtt gaacttgcgc ccttcatcac
    35881 gcggcccgta ggtctgtgcg cctgcaaccg aactggccgc cagcagcgtg cccagcacaa
    35941 gcagtcgagt cgaggtcttc atggccatct cctgaggtcc ggtatgccgc tagtgtcctc
    36001 ccacggctgg caaccggaag tgaaatggac gtatgcgcgg cgacatcggc catcgcccgt
    36061 tcaggaaaaa aatccgcgcc catcgcgacc agccatcgcg atgggcgccg tctccctgcc
    36121 ggcatgccgc ccttctagaa ctcctgccag ccacccgcgt tggcggccag cgtcgaatcg
    36181 atgcggggcg aaagaaccgt cgccctgcgc accggagcca ccgacgcagc gacggccgcc
    36241 aacgcaggcc gtaccaccgc cgcggccgtg gcggcgccgg tgcggaacac cgacactgct
    36301 tcagccaaca ggttggcctg ctcttccatc gagcgtgccg cagcgctggc ctcttccacc
    36361 aatgccgcat tctgctgggt ggtctcgtcc atctgcacta cggcctggtt gacctgctcg
    36421 atgcccgaac tctgctcctg cgaggcggcg gagatatcgg ccatgatgtc ggtcacccgc
    36481 tgcaccgagg ccacgatctc gcccatcgtg gtgcctgcct ggcgcaccag tgccgaccca
    36541 tcggccacct tgccgaccga gtcctcgatc aggcccttga tctccttggc ggcaccggcc
    36601 gagcgctgcg ccagcgtgcg cacctcgctg gccaccaccg caaagccccg gccctgctca
    36661 ccggcacgcg ccgcttccac cgcggcgttc agcgccaaaa tgttggtctg gaatgcgatg
    36721 ccatcgatca ccgagatgat ctcggcaatc ttcttcgagg cggcttcgat ggcggacatc
    36781 gtggtcacca cctggccgac cacctccccg ccctgcgagg cgacaccatg cgcgccgatg
    36841 gctagctggt tggcctggcg cgcgtgttcg gcgttctgct tcacggtaga ggtcagctcc
    36901 tccatcgacg cggccgtttc ctccagattc gcggcctgct gctcggtgcg ccgcgacaag
    36961 tcggtgttgc ccgaggcaat ctcgcctgca gccaggttga tgctggacgc actggcctgg
    37021 atgcggccaa cgatctgctt gagctgatcg acggtggcat tgcagtcatc gcgcatgcgg
    37081 gcgaacacac catggaagtc accttgcatg cgtacggtca ggtcgcctcg cgagatggcc
    37141 tgcaacaggg tcgacacctg caccaggttc tcatcggtgg tctgcatcag ctggttgagc
    37201 ccggccacca tgtcgcggaa atcgtaggcg aagcggtcct catcgccgcg caggctgaaa
    37261 tcacccgccg cggctgcggt cgccagccgg cggatctcgc tgttgatcgc cgacaggctg
    37321 ctcttggttt catccattgc ctgggtgatc gccgccttct cgcccggcaa cgggtccatg
    37381 tccaccgaca ggtcaccgcg ggcatagtgc ttcatcactt cgatcagccg gttctgcacc
    37441 tgcacgtgcg aaccaaccag cgcattggtt tcgtgcacca tccgcccgaa gtcgccgggg
    37501 aacgcgctct catccatgcg gtagctgagg ctgccggcgt catgctggcg ggccagctcg
    37561 ccctgcgccg ccatcaccgc ctgtacctgc atctgcatgc gttgcatcga cctgagcagc
    37621 tgggtcacct catcgttgcc cgacgcatcg atgacgttgt ccaggcggcc accggcgatg
    37681 ccatcggcca gcttcaccgc cccctccagc ggacgggtca ggctgcgggt gatcgcccag
    37741 gccgccagcg aacccagtat caggctcatc acgccgaaca cgatcgacaa ggtgccggtc
    37801 caggcctccg tgctgcgata ttcctggcgg ctgcgctcgg tcagtgtctc ctgatgccgc
    37861 agcagcgtcg agatagattc gttccaggcc gtggccagcc cgtgctcggc cagcagctct
    37921 ttggcagcgc cgtcgaaatc cccagccttc atgcgctcgt gcagatgctg ggtggaggcg
    37981 tcggtcgcct tgcgtgccgc gtcgattttc gcaaccagcg catcgccggt ggcgtcacgc
    38041 ggaatcttga tgtacctggc ccagatgccg tcgtaggtct gcgacagttc ctgtgccttc
    38101 tgataatcct tgtcgaaatc ctcgccacgc ttgatcacca tcagccgccg atgcatcagc
    38161 acggcattgt tggtatcgag catgtcattc agcagccgca tcttcaccat gttgacgtcc
    38221 accactttct cgaactgggc ggacttgagc tggtttccgt acagcaccag gccaacgatg
    38281 gccatgatga acagcagcag caaaccaaag ccggcgccca gccgggatcc cactcggagg
    38341 ttgcgtaagg cgagcatctc aattcccttg atcatggccg tacgatcgat ggcggcgcag
    38401 gcaagggaaa ctttatggga gtttatattt ggaacgatcc aataatattg aacaggcaga
    38461 atggacccgc ccccataccg ccccccatcg ccctttggct gccgatgaca tgccagcgca
    38521 gcattgaaat cacgccgcat tgacagtttc tccccggtat atccatccag catccattga
    38581 taatcagcag cggacaccac cgttccggat cgggctgcca gtgcatgcag ccgttaccgg
    38641 cgaacggcta cagttgcggc atgtccctgg tcctgcacat cgacggcgca tccatcaacg
    38701 acatcgccag cctgtacgcg gaaatcaacc gtgtgttcat ggccagcgag aactggcagc
    38761 tgggagcaag cctggacgcg cttgatgacc tgctgtgggg tggctatggc gtgctcgccg
    38821 gccactccgc cgcgaccgtc gtctggcacg acatcgcgca tagccgcagt gtattggggc
    38881 gggacgccac gcatgcgtgg ctgcggtcaa aactcgatca gcccggtacc ttcaatgtcg
    38941 cggccatcaa cgagcagatc gcggcgctgg agcacggcca gggacagacg tacttcgaga
    39001 tcgtgatgga gatcttcgac gggcatccgc agatcaccct ggtcgctgcc tgagcgctgc
    39061 ggcaacgccg cgtgccgggc ttcagaattt cgccagggcc tcacccagcc gcaatgggaa
    39121 cgcaacctcg ctggccagat gccatgcgcg tgcattggca cccagccggg tgcattcggc
    39181 ctcatccatc gccagcgcac gctcgacggc ctgctccaac gctgtctcgt ccacatgcca
    39241 ggtcctggac aggtggcagg gcgcgccctc gtgggccgtc accagaagac cgcggctctc
    39301 atcgatcatc tggttcatcg gcgcgccatc gcaggtgatc accaccgccg cgcagctcat
    39361 cgcttcgacc aggtagtggc cccagccctc ggtctgcgac aggcacaggt ggaacacatg
    39421 ctcgttctgc aggcgctgca cctcttcatc gggcaggcgc tcgcggacga tccgcaggtt
    39481 tgccgcccca ccctcgtctt cgtccgaagg cccgccacgc aggacggtca gcaggggcca
    39541 ttccgggtgc cgcttccaga ccttcaccag ggtcgccgta cccttcatgc ggctgctgcc
    39601 tgcggcatgc aggaagctgc ggggcttgcg cggcaccgaa gcgtcgtagc ggtcgcggct
    39661 gcagaagccc acttccagcg cgcgcatgcc cagcgcagtg aagatgcgcg tggcgtcctc
    39721 ggtcttggtc agcagggcat cgaatcgcgg caggatgcgg aggctgcgcg cagataccca
    39781 ttccggattc gggatcagca gattgacctc ggccaggcca aaactggccg gccgtacgtg
    39841 ctccagcgag atgttgatat cgaatcgcgc cggcttccgc cccaggctca gccacgacgc
    39901 caacaggcgg cgcaggcgca accggcgcag tttccacgcc ccgccattgc gtaccgcatc
    39961 gaggcggctg atggtcacct catgcccgag ctgtcgcagc gagcgctcga tcacctggat
    40021 gtcatggctc aagccgcgct ggttgtcggc ggccagcagg tgaacatgcg ccatcagtgc
    40081 gaactcccgt cccggcgcag gtcgcggaca ggcaacgcgg tcgccaggac gaagcccagc
    40141 accaggtaga aatagaacga atgcggcatt gcccgataga acacgttgtc ggtgaacgcc
    40201 gagagcgcgt agacgatgac cacggcaagg ccggcggtgg cgaccatcgc cgtggtttca
    40261 tcggcatggc cgatccgccg cacgaaatga atacccggca ggatgaagat cagcagcatg
    40321 atcagcaaca gcggcacgcc accggtcact gccgcttcca ggtactcgtt gtggggatgg
    40381 ttgtagcgag agatcgcgtc ggacacctcg ccgcgcgcaa tgccctcgcg cgcataggta
    40441 ccaaactggt tcaagcccac cccggtcagc gggtgctcgg caatggcgtc gaccgccacg
    40501 ccccacatcg cgatgcgctc acgcaccgaa cccacttcgt tgtgctggtt gaagccggcg
    40561 atctcgccac tgacctcacc gaagcgttgg atgacctgat ggttgagcac cgtggtggca
    40621 ccgagcacgc cgatgaccag ggcgccgacg aaggccagcg ggccacgcca gcgccgggta
    40681 cgccacacgt gcaccgtcat caccatcagc atcgccggaa tgaaggccag gatcggcccc
    40741 cggctctgcg ccaggatcga gccgtagacg cccacggcaa cggcaacccc atgcaggcag
    40801 cgctcggccg gatggacgtt cggctggatc aaccggatga ccgagaacag cgccatgcac
    40861 agcgtgacca tcgtgaactc gatggccgtc cattcgccac cactgaaacc ataagcacgt
    40921 tccaacccca tcacgtggtg ctgcacgatg catgagccac cgaacacaag ggtggagagc
    40981 gcgaacagag tcaagatcag gcgccagtcc agcacggcgg cgaacaccgc ggccgtaccc
    41041 agatagagca gcatctgcgc gggcaggtcc agctcgctcc agcgcaggtc gtgccaggcg
    41101 atgctgaaga aggcaaaggc caggcgcagc aaacaggcga tcacgatgaa gcgcgcgatg
    41161 cggtagcgca ggcggacatc cggctggcga cggatcagca ccacgccggc gaccagcagg
    41221 gccagcagca gcacggcctt caacaggttg tacggcgcag atccggcaag cgggacaacg
    41281 gcaaccagcg tactcagcag ggcgatgcgc cagtaatggc gaggttcggc ggccatgcag
    41341 gctgcagtca tgcgtgttct ttccatcaac gcccgcccgg ggatgaattg ccccggtttc
    41401 catggaggcc gattggcggg aatcgccggg gccgacacta ccgtggccct ccatggaaat
    41461 caaccaaacc accgctgtcg ttggcgccca gacagccccg gcgcgcgccc cgcccggtgg
    41521 atcagggcgg ggatcatcga cccgcccagg ccgttacact aactgttctt ccggccctgc
    41581 cccgcaaggc cttgcccaga cgccctgccc agacgcgaac cgctccaagt gactgatacg
    41641 aaagacaaca ccagcaacgc caaggcgtcc aaagaacaca ccccgctgat gaagcagttc
    41701 ttcgcggcca agtccgacca tccggacctg ctgctgttct tccgcatggg cgatttctac
    41761 gagctgttct acgacgacgc ccgcaaggcg gcgcggctgc tggacatcac cctgacccag
    41821 cgcggcagct ccggcggcgc gccgatcccg atggccggcg tgccggtgca tgcctacgag
    41881 ggttatctgg cacggctggt ggcgctgggt gagtcggtgg cgatctgcga gcagatcggc
    41941 gatccggcgc tggccaaggg cctggtcgag cgcaaggtgg tgcgcatcgt cacccccggc
    42001 acggtgaccg acgaggcatt gctggacgaa cgccgcgaca ccctgctgat ggcgctgtcg
    42061 cgtaccaagc agggctacgg gctggcctgg gccgacctgg ccggtggccg cttcctggtc
    42121 aacgaggtgg aaaccgacga cgcgctggaa gccgaactgg cgcggctgga gccggccgaa
    42181 ctgctggtgc ccgacgaaga gaactggccg gaattcctgc gccagcgtac cggcgtgcgc
    42241 cgccgggcgc cgtggctgtt cgacgccgac agcggccgtc gtcagctgct ggcgttcttc
    42301 aagctgcatg acctgagcgg cttcggcatc gacgacaagc cgcgtgccac ggctgcggcc
    42361 agcgccctgc tcggctatgt cgaagaaacc cagaagcagc gcctgccgca cctgacctcg
    42421 atcgcgatgg aaaccgccgg cgaggcgatc gcgatgaatg ccgccacccg tcgccatctg
    42481 gaactggata cgcgcgtcga tggcgacacc cgcaacaccc tgctgggtgt gctggacagc
    42541 accgtgacgc cgatgggcgg gcgcctgctg cggcgctggc tgcaccgccc gctgcgcctg
    42601 cgcgaggtgc tggtgcagcg ccaccatgcg gtggaaacgc tgatcgaccg cggcagtgat
    42661 gccgacatcc gcgagcagtt ccgccgcctg ggcgacctcg aacgcatcct cacccgcgtc
    42721 gcactgcgct cagcgcgccc gcgcgacttc tccaccctgc gcgatggcct gggcctgctg
    42781 ccggcagtgc gcgaggtgct ggcgccactg gattctccac gcctgcaggc gctgcacgcc
    42841 gcgctgggcg aacatgacga atgcgcgcag ctgctggcca gcgccatcgc cgagatgccg
    42901 ccgctgaagc tgagcgatgg cggcgtgctg gccgacggct tcgacgagga gctggacgag
    42961 ctgcgccgcc tgtcgaccca tgccgaccag ttcctggtcg atctggagca gcgcgagcgc
    43021 gagagcagtg gcatcgccac cctgaaggtg ggctacaacc gggtgcacgg ctattacatc
    43081 gaaatcagca agggccagtc cgaccgcgca ccggtgcact acacccgccg gcagacactg
    43141 accaacgctg agcgctacat caccgaggaa ctgaaggcct tcgaggacaa ggtgctgtcc
    43201 gcgcgcgacc gttcgctgtc gcgcgagaag tacctgtacg agcagctgct ggacaccctc
    43261 ggcgggcagc tggaaccgct gaagcaatgc gcggcagcgc tgagcgagct cgacgtgctg
    43321 gccggcttcg ccgaacgcgc gcaggcgctg gactgggcac gcccggaact gcaggccgag
    43381 ccctgcctga agatcgagcg cggccgccac ccggtggtcg aagcggtgcg cgaacagccg
    43441 ttcgaaccga atgacctgga cctgcatccg gatcgccgca tgctggtgat caccggcccg
    43501 aacatgggtg gtaaatcgac ctacatgcgg cagaacgcgc tgatcgtgct gctggcccac
    43561 atcggcagct tcgtgccggc cagccgtgcg ctgatcggcc cgatcgaccg catcctgacc
    43621 cgcatcggcg ccggtgacga cctcgcccgc gggcagtcca ccttcatggt cgaaatggcc
    43681 gagaccagct acatcctgca ccacgccacc gcgcactcgc tggtgctgat ggacgagatc
    43741 ggccgtggca cgtccaccta cgatggcctg gccctggccg acgcggtggc ccgccacctg
    43801 gcctaccaga atcgctgcta cacgctgttc gccacccact acttcgagct gaccgcgctg
    43861 gccgacgagc agcacgaggg cggccgcagc ggcatcgcca acgtgcacct cgatgccgtc
    43921 gagcatggcg aagccctggt attcatgcat gcggtgaagg acggcccggc caaccgcagc
    43981 ttcggcctgc aggtggcggc gctggccggc ctgccacgca ccaccgtggc gcaggcccgt
    44041 cgccgtctgg cggagctgga gcagcgcggc ggagaaagcc atgccgccga actggcgccg
    44101 caggcgctgg atgcaccgca gcagttcggc ctgttcgccg cgccggccag caaggcgcag
    44161 gaagcgctgg cggcgatcga tccggacgag ctgaccccga agcaggcgct ggaagcgctg
    44221 taccggctga aggcgctgct gtaaccgcag cacacgtcca tggcctcccg cccgaccggg
    44281 gggcaattga aagactccac aaatccgatt ctgcctttca attgacagaa tctatcaacc
    44341 tgaacgaatc attcgattat tcatttcatc tggccctagc tacagtcgag tgaagatgtt
    44401 tcccacgtct tcaccgccac caggagccag ccgatgagcc agtccgacaa caacaacgcc
    44461 aagtgccctt accacagcgc cccgacgcct gaggaaggcg cccagcagca gcgcgagctg
    44521 agcaccacgc cgaagcagaa gcacggtgac gacccggtta ccccgatgac cacggccttc
    44581 ggcgcgccgg tggtggacaa ccagaacagc aagaccgccg gcccgcgcgg cccgctgctg
    44641 atggaagacg tgtggctgct ggagaagctg gccaatctca accgcgagat cattcccgaa
    44701 cgccgcatgc acgccaaggg ctcgggcgcg ttcggcacct tcaccgtcac ccacgacatc
    44761 agcaagtaca cccgcgccaa gctgttcgag aaggtcggca agcagaccga aatgttcgcc
    44821 cgcttcacca cggtggccgg cgaacgtggc gccgccgacg ccgagcgcga catccgcggc
    44881 ttcgcgctga agttctacac cgaagaaggc aactgggacc tggtcggcaa caacaccccg
    44941 gtgttcttcc tgcgcgaccc gcgcaagttc gccgacctca acaaggcggt caagcgcgac
    45001 ccgcacacca acctgcgcag cgcgcgcaac aactgggatt tctggacgct gctgcccgaa
    45061 gccctgctgc aggtgaccgt ggtgatgagc gaccgcggca tcccgcgcag cttccgccac
    45121 atgcacggct tcggctcgca cacctacagc ttcaccaacg ccgacagcga gcgcttctgg
    45181 gtgaagttcc acttcgtcag ccagcagggc atcgaatcgc tgaccgacgc acaggcgcag
    45241 atcctggtcg ggcatgaccg cgaaagccac ggccgcgacc tgttcgccgc catcgacaag
    45301 ggcgacttcc cgaagtggaa gctgttcatc caggtcatgc cggaactgga tgcggaaacc
    45361 taccgcgtgc acccgttcga cctgaccaag gtgtggccga agagcgacta cccgctgatc
    45421 gaggtcggcc agttcgaact gaaccgcaac ccggtcaact ggtaccagga cgtggagcag
    45481 tcggcgttcg caccgagcaa cctggtgccg ggcatcggcc cgtcgccgga caagatgctg
    45541 caggcgcgcc tgttcgccta ttccgatgcg cagcgttacc gcctgggcgt caatcaccac
    45601 cagattccgg tgaacgccgc gcgctgcccg gtgcacagca accaccgcga tggtgcgatg
    45661 cgcgtggacg gcaactacgg cggcctgccg cactacgagc cgaacagcta cggccagtgg
    45721 caggagcagc cggagtaccg cgagccgcca atgaagatcc gcggtgacgc cgacttctgg
    45781 aacttccgtg aggacgacgc cgactacttc agccagcccg gtgcgctgtt ccgcagctac
    45841 aaccaggcgc agaaggaccg cctgttcgcc aacaccgccc gtgccctggg cgatgcgccg
    45901 gacttcatca agcagcgcca catcgacaac tgcagcaagg ccgacccggc ctacggtgcc
    45961 ggcgtcgcag cagccctgaa ggcgctggcc agccagccgt cggacccgtt caagccggca
    46021 cagccggaaa ccgacttccc tgccgccacc ccgggcgcgg aagacatcga gctctgatcg
    46081 gcctcccccg tgtacggcac gccgcctccc cgtgaggcgg cgtcgccgtt ttaacggtcc
    46141 gcgtcgtacc ttctgcacgc cccatcccaa tcgaggattc ccctgatgag cctgaccgat
    46201 gaacttctcg ccaaattgca gggcgctccg ctgcagcagg tgtcgcagca gctcggcatc
    46261 agcgataccc aggcctccgg cgcgatcagt gccgcgctgc cggtgctgat gggcgcgctg
    46321 ggcaacaacg ctgcgcagcc gcagggggcg caggccctgc tcggcgcgct gcagaacaac
    46381 cacagcggcc tggacctggg cagcgtgctc ggttcggtgc tgggcggagg tggcggtggt
    46441 gccgccagcg atggcgccgg catcctcggc cacatcttcg gcggcagcca gcagaaggtg
    46501 gaaaccggcc tggcccaggc cacccagctc gacagcggcc gcaccagcca gctgctgcag
    46561 atcctcgcgc cgatcgtgat ggccttcctc gcccagcggc tgggtggcgg ccaggccgat
    46621 gccggctcgc tcagccaggc gctcggccag gaaaagcagc aggtgcagca gcagggcggc
    46681 attgccggtg gcctgctcgg cagcgtgctg gaccaggacg gcgacggcca gttcggcatg
    46741 agcgacctgt tgaagctggg cggcaacctg ctcggcggca agcgctgaca ggcgctgttg
    46801 ccggggatga cccggcagga tctgcatcgc tacggatcac gccgggccct gcccggcgtc
    46861 ctaccggttc ccggccttca gccgctgcag gatcggcgcg aacaacggcg cctgcatcga
    46921 gcgcggcggc accgctggct ttccttgttc ctgtgcctgc cagtacgacc acggcagcgc
    46981 cttgtcgccc agttcgtagt ccatgccgtc ccagccatcc tcgcggaaag cgtagaaggc
    47041 ccagtgcacc ttgtcctgtt ccagcacctg cagcacgtcc tgcaggtagc ggctgcagtc
    47101 gggccagcgg cgcatgcagc cgaattcacc gaccaccatg cggttggccc ccaccccgtg
    47161 cgtcttcgcc cactccatcg gctgctgcag gtagctgcgc acgcgcgccg cgtcccagcg
    47221 ctcgctgtgg ccgccgaacg gcacgctgcc cgggtagcgc cagggcttgg ctcgcttctg
    47281 gttgggcgca ctggtcgctg cgtacggttc gtacatgtgc acgctgtaca gcagcttcgc
    47341 gtcgtccagc ggagccggcc agtaattgaa gccatcggcg gccgcatacc atccggcatc
    47401 cagcatcagc ggcatttccg cgtcgacctc gcggatgcgc gcgatcagct ccgagtagaa
    47461 gcggcgcaga tcacgcggac cgtcctgcac cccggcatac cactgccgca tcgcttcgct
    47521 ggacgcatgt tcggccaggc cggcaccgta ctccggcacc ggttcgttga tcaggttgta
    47581 ggcggccagt gcgggatgcc ccttcaacgc cacggccagg tcatgccaga agcgtagcgc
    47641 cggggcgtga ttgtcgaacg actgccacag gcgctggtcg accttgtcac cgttgtgctg
    47701 cttccagcgc agcaacggca gcgacagcgg ggtgagcacc accttcagtc cggccgcgtc
    47761 ggcatcgtcc agcacgcggc gcaatgtcgc cagatcagct gcgaccagcc cttgatagtc
    47821 gtccgcgttg ccgatcagga agtcacggcc gccctgcgcc ttccacttgt ccggtaccag
    47881 ccgcacccag gtcgcgccgg tcgcacgcag cgcctcgaag tagtcccggt ccggaggcga
    47941 catgttcatg ctgttgcccc cgcgctgcgg agcatcccag aaggtgatat cggccgcgtg
    48001 caagggcgcg gcagcaagca gggacaggca aaacaatagg caacgcatcg gcaggcttcc
    48061 agaaggtgaa catccagcct gccccgccgc ttccgaacgc accgtgactc gcgcctcctt
    48121 tcgcaccgcg ataggaacaa tgcaccggaa tcgccgttcc gtcagagcgc gtcgatatca
    48181 cccaatgccc gtatcaaccg ccgcgcgcgc ttgtccggct tgtgctccgg cggctggaag
    48241 ccatcgcggg cggcgatgcg caatgcgcgc tgctcggcac gacgcgcctt cgaggcttcg
    48301 ctctcggtgt acagctgctg cgccgccggg gccggcccgc gctggtcgct caggcccagt
    48361 acctggatct cgaaatgctc ttcgccgcga tcgacctgca gctgctcacc cacgcgcact
    48421 gcgcgcgagg atttcgggcg ctggccagcc acgctgacct tgccggtctc gatggcctgc
    48481 ttggccaggc tgcgggtctt gaagaaacgg gccgcccaca gccagatgtc caggcggaca
    48541 ctgggcgaca gcggggaaag ctcatgcatc ggtgcgtact actccggtgg cttgttcagg
    48601 ggacgcggat ggtcggggtc ggtacggcaa ccgctgcccc cgatcagggt gggtacgcca
    48661 gcggacagat cctggcgctg gctgccgacc aggcattcgg gccggtcggt cggccgcacc
    48721 tgggtatcac ccagccggtc gtccatcgaa catgcggcca gtacgacgcc gatcaaggcc
    48781 agcgccatgc cccgtcccac ccgtagtcgt tgatgcattg ccacatcccg caaaccggct
    48841 tggtgctagt gtgcgcctcc cgggaatcga tcaccactcc atggccaaag cgccgcttga
    48901 cctgacctcc ggcccgatcg gccgcaatct cctgctgttt tccctgccga tcctggccgg
    48961 caacatcgcg cagtcgctga acggttcggt gaatgcggtg tgggtggggc gtttcctcgg
    49021 cgaggcggcg ctgaccgcca ccgcgaacgc caacaacatc atgttcttcc tgatcggctc
    49081 ggtgttcggt ttcggcatgg cctcgaccat cctgatcggc caggccatcg gcgcacgcga
    49141 catcgcccag gcgcgacgcg tggtcggtac cagcgccacc ttcttcatcg gcctgtcggt
    49201 gatcatcgcc atcgccggct ggttcatggc gcatccgctg ctggcggcga tgggcacgcc
    49261 ggccgcctcg ctgccgctgg ccgaggccta cctgcagatc atcttcctgg cgatgccgac
    49321 gctgtacgcg ttcgccttcc tcactgccgc gctgcgcggt gccggcgatt cgcgcacgcc
    49381 gttccgcttc ctgatggtct cggtggcgct ggacatcgtg ctgaacccgg tgctgatctt
    49441 cggcatgggg ccgttccccg cgctgggcat cgccggctcg gcgtgggcta cgctggtcgc
    49501 gcagaccctg tcgctggccg gcctgctgct gtacatgcgc cacaagcgcc acacgctgtg
    49561 gctggggcgt gccgacatgc gcctgttcaa gctcgacctg accatcctca aggcgctggt
    49621 gctcaagggc gtgccgatgg gcctgcagat ggtgctgatc tcgctgtcgg tgatcctgct
    49681 gatgaccatg gtcaaccagt acggcaccgc taccggcgcg ggttatggcg cctcgctgca
    49741 gctgtggaac tacctgcaga tgccggcgat ggcgatcggt gcggcctgct cgtcgatggc
    49801 cgcgcagaat gtgggcgcac agcgctggga ccgcgtgcgt ggcaccgcac gccagggcgt
    49861 gatgttcaac ttcctgctga ccggcgcact gatcctgccg ctggtggtgt tcgatcgcca
    49921 gctgctggcg ctgttcctgc cgccggccag cgaggcattg gacatcgccc gccatctcaa
    49981 ccatgtggtg atcggctcgt tcctgttctt cggcgtcagc ttcgtgatct ccggcgtggt
    50041 gcgctcgacc ggcgcggtga ttccaccgct gctgatcctg gccggctcgc tgtggggcgt
    50101 gcgcgtgccg ttcgccgaac tgctgcagcc gtactggggt gccgatgcga tctggtggag
    50161 tttcccggtc agctcgttcg tatcgatgct gctgtcgctg gcgtattacc gctggggtgg
    50221 ctggcgcaag gcgaagatga tcggcaaacc gtcgcacgcc gaggaactgg ccacgccctc
    50281 ggaaattccg gcctgcccgc cgtcaccggt ggccgacccg gatgcggcgc tggagtcagc
    50341 cccgcc
//
LOCUS       DAOKIP010000008        47927 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.008,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000008 DAOKIP010000000
VERSION     DAOKIP010000008.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 47927)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 47927)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..47927
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.008"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            138..716
                     /gene="rsmD"
                     /locus_tag="QEL58_000431"
     CDS             138..716
                     /gene="rsmD"
                     /locus_tag="QEL58_000431"
                     /EC_number="2.1.1.171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014036813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(966)-N(2))-methyltransferase
                     RsmD"
                     /protein_id="HDS1674954.1"
                     /translation="MSGRGGNDGQVRIIGGRWRNTRLPVPTLPGLRPSSDRVRETLFN
                     WLMPRLGGARVLDLFAGSGALGLEAVSRGAAHATLVERDAQLGRNLSAAVAKLQAVDQ
                     VTVVQADALRWLQSAPAQQADLVFIDPPFADGLWQDVLAQLPRHLAADAWLYLESPAG
                     HVPSLPAEWLLHREGGTREVRFALYRRATATL"
     gene            743..1252
                     /gene="coaD"
                     /locus_tag="QEL58_000432"
     CDS             743..1252
                     /gene="coaD"
                     /locus_tag="QEL58_000432"
                     /EC_number="2.7.7.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010372369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pantetheine-phosphate adenylyltransferase"
                     /protein_id="HDS1674955.1"
                     /translation="MTVANRRIAVYPGTFDPITNGHIDLVSRAAPLFEKVVVGVAQSP
                     SKGPALPLEQRVQLARGALGHHGNVEVIGFDTLLAHFVRSVQGGVLLRGLRAVSDFEY
                     EFQMASMNRHLIPEVETLFLTPAEQHSFISSSLVREIARLGGDVSGFVPAAVLEALRK
                     VREAKSAQS"
     gene            1313..1804
                     /locus_tag="QEL58_000433"
     CDS             1313..1804
                     /locus_tag="QEL58_000433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017157277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674956.1"
                     /translation="MNTTMRAMLIASLALAFTACKKEEAAPVDEAKQALVAPSKDDDA
                     GWKKYLQEVAIQNMGNITNSPFLYYLSPESDPDFQAKYERQTESATQAVARGVQPGNM
                     LAFGSSASGKMADMIQAVFKDVGPDSMKGVRVVFIGQSADNARVQAAIQPTGAEYIFV
                     EAK"
     gene            1936..2217
                     /locus_tag="QEL58_000434"
     CDS             1936..2217
                     /locus_tag="QEL58_000434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfhL family 4Fe-4S dicluster ferredoxin"
                     /protein_id="HDS1674957.1"
                     /translation="MSLKINELCVNCDVCEPACPNQAIAMGETIYVIDPARCTECVGH
                     FDEPQCVVVCPVECIDPDPEIVETEDQLLAKLRQLQHDHPELYAEPPSE"
     gene            2214..3944
                     /gene="ggt"
                     /locus_tag="QEL58_000435"
     CDS             2214..3944
                     /gene="ggt"
                     /locus_tag="QEL58_000435"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HDS1674958.1"
                     /translation="MKTLIVRPLLLLGLLLSPIAWADSPVRAERPDGAAIASGHALAT
                     QAGIDILAQGGNAFDAAVAVSSTLAVVEPISSGLGGGGFFLLHDAATGKDVMLDARET
                     APAAATPQAFLDKQGNLDRDRSVNGAWSAGIPGLPAALVELSAKHGKLPLSASLQPAI
                     RIAREGFPVYERMAKGYASRREVMERFPGTREVYLRNGKPIATGDLFKQPELAQTLER
                     LAAGGFDGFYRGQTGRLLLEGVKQAGGKWTAEELAGYRVKQREPIVFNYNGWKITTAP
                     PPSSGGIALASMLQILEGWDIKKMDPAHRTHLVVESMRRAYRDRTFFLGDPDFVQIPQ
                     KVLTSKDYAQGLRATIHPEKATPSDLLSGNPTPLEDDETTHFSIIDRDGNRVGATQTV
                     NLLYGSGLIPKGTGVLLNNEMDDFALKPGTPNAFGVMGYEANAPKAGKRMLSSMTPTF
                     MENADKVVVLGTPGGSRIITMVLLGILGYDAGLDAQQVAALPRYHHQWLPDLIEAEDD
                     AFDAGTVKQLQAMGHRIDLPGNVAAGGRGSSHVWGNLQTVEWDRKSNTLFGGSDPRNP
                     VGSAQVVPAR"
     gene            4065..4952
                     /locus_tag="QEL58_000436"
     CDS             4065..4952
                     /locus_tag="QEL58_000436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014036816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HDS1674959.1"
                     /translation="MKLWSIRGNSQRLDGGAMFGNAPRALWEKWAAPDELNRIELACR
                     ALLASPLEGKTVLFETGIGAFFDPRMRERYGVQESQHVLIDSLREAGFEHEDIDVVVL
                     SHLHFDHAGGLLAAWSEGREPELLFPNATYVVGAQHWQRAVQPHPRDRASFIPELPGL
                     LQASGRLEVVDGEYSKALGRSVRFSYSDGHTPGLMLAEIVGHAHAGEGAHGGVVFCAD
                     LIPGRSWVHVPITMGYDRNAELLIDEKRQFLEDKLARNVHLFFTHDPQVALAQLGRDD
                     KGRFVTLHEQGELKARALG"
     gene            complement(5037..5330)
                     /locus_tag="QEL58_000437"
     CDS             complement(5037..5330)
                     /locus_tag="QEL58_000437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="starvation-inducible protein"
                     /protein_id="HDS1674960.1"
                     /translation="MKASFLLAAVLLVGLPLAANATTPQQQRMADCSAKNKGLKGDAY
                     KTAQSACLSGHATETKAVNPQQERMRKCNADAGAKKLASDARKTFMSSCLKAS"
     gene            5456..5815
                     /locus_tag="QEL58_000438"
     CDS             5456..5815
                     /locus_tag="QEL58_000438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012479781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDS1674961.1"
                     /translation="MGKYDPAIQRIFHALADPTRCAIVAALGQGPCTVSMLAEPLQMA
                     LPSLMKHLAVLERSGVVRSHKQGRIRTCELVPARLGQAEQWLAEQRVLWDARADRMVD
                     FVETLHRQEQAHGRGRK"
     gene            5796..6275
                     /locus_tag="QEL58_000439"
     CDS             5796..6275
                     /locus_tag="QEL58_000439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HDS1674962.1"
                     /translation="MAEDASSNPDTDLVISRLLNAPRAALWRAWTDPELLRQWWCPKP
                     WTTEVRAFDLSPGGAFHTFMQGPDGGSSDNPGSFLEVVPQQRLVFTSMLGAGWRPQSP
                     WLGFTAIITMEDEGQGCRYTARVMHPDKALRDQHEQLGFFDGWNTAIGQLEAFAAGL"
     gene            complement(6336..6968)
                     /gene="upp"
                     /locus_tag="QEL58_000440"
     CDS             complement(6336..6968)
                     /gene="upp"
                     /locus_tag="QEL58_000440"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil phosphoribosyltransferase"
                     /protein_id="HDS1674963.1"
                     /translation="MKIVEVRHPLVQHKIGLMRNAALSTKDFRELANELGTLLAYEAT
                     ADLDTEPHTLPGWAGPVTVQRIAGAKITVVPILRAGLGMLSGVLSLIPAARVSVVGLQ
                     RDEETLQPVPYFERLTGRLEERDALILDPMLATGGTLIATIDMLKRAGARRIKGIFLV
                     AAPEGIDAVKAVHPDVEIYTAAIDAQLNDKGYILPGLGDAGDRIFGTRVG"
     gene            7125..9686
                     /locus_tag="QEL58_000441"
     CDS             7125..9686
                     /locus_tag="QEL58_000441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014502926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDS1674964.1"
                     /translation="MHIKTPLAVAITLTLAMGAVAPLQAAGQQAVAATGAVAADAVDL
                     DRIEVRAQLESQIRAVDLKRSSDAIEDAVSSDALGQYPDKNVAESLQRLPGVSVTRDQ
                     GEGRFVVIRGLDANLNSVSVDGIAIGTPEDSSRAAPLDVIPSDSTERLRVVKSPTPDM
                     PGDAIGGAVLVESASAFDRDGRSLRAKIEGSHQQLSGETSPKAAFNYSEVFNDTFGVA
                     LGVNYQKRKFESDNTEVEYDGEDDAAPGDVTAINLQHRKYEIERKRIGANLNLDWRPN
                     EDSKYYLRTLYSQFDDAETRQRVIFNFDDAKMVKTGTDQYRLDGMPKDSIDKRMRYRT
                     KKENTFAASLGGENKLTNAVVDYKVGYTRTEERVNDEMEARFKLNGAPFNGTLDQRSR
                     LPSYSFDNPQWLDNGNYAFDRFVLSPKQVNDKEHSAQVNVRFDGDSGSIKIGLLGRWR
                     DRDVNVDESELRVGPKVALSSWTTSSPEHRHGNMGDGMDSAAMRAFWAVNGSQYSARP
                     QDVGGNAMTSLEEDYVASEDIFASYAMGTWDIGALRIIGGVRVENTQFKATGNQVDVA
                     ANGRSFTVTPRVANSSYTNVLPGLHLRYDAADDWVLRASANKTVSRPSFGDISPRVGY
                     SRGDEEVRLGNPELDPYESKNIDLSVEKYIGSTGIVSLGLFHKSIDGYIVETVRTNDP
                     DYGGFDVTQPINGRKATVRGAEFNWQQQLAFLPAGLDGLLVGASGTWLDTTFDAGIKD
                     RAGEDFTLPRASKHVYSAHIGYEKYGLSTRLAAVYRSEYLDSIGKGRAFDIYVAPNTQ
                     LDFSLDYKFTPRVSMYFEAQNLLDKPLELYQGTRSRTLQMEEYGRTYALGLKVAL"
     gene            9686..10801
                     /locus_tag="QEL58_000442"
     CDS             9686..10801
                     /locus_tag="QEL58_000442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014036821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phytase"
                     /protein_id="HDS1674965.1"
                     /translation="MGRGITVLAAALVASLAAGCTSATGNDPAAPATAAKATGERAVA
                     TIAEAFLSPMTPADNIDSPAAWRAPDGALWLIATAKATDKLVVYDGSTGQHLRDVGSS
                     GTAKGQFDRPNGIAVTDDLLWIVERDNHRVQVLSLPDFTPLATFAADDLRKPYGLWVD
                     RRADGYSVYVTDSWDNGEDAQGRDILPPLAELDKRVRQYHVTRDGAKVEATLVASIGD
                     TTEAGALRVVESIWGDPENDRLLIAEEDESYASEFKVYTLAGRFTGTTFGREVFKAQA
                     EGVTLRTCGKDGWWITTEQGKQRSVFHLFDRHTLKPVGAFQGNTVANTDGIWMMQQPS
                     ARFPHGALYAVHDDQGVVAFDWESIAKQLALPLECGA"
     gene            10798..12165
                     /locus_tag="QEL58_000443"
     CDS             10798..12165
                     /locus_tag="QEL58_000443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005412991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase family protein"
                     /protein_id="HDS1674966.1"
                     /translation="MSGRHMMHGLALGLMLALPSLSFAAAEPNTQVPAGSRHYAATTV
                     PDRIVASPSADPSHAFAVAWRTDGSVQAPLLEIALAADSPAIEGIRQVRATTRALQTE
                     NGLSHHHRADIGGLQPDTQYVYRVQGNGSWSAWNQLRTLAAADQPLTLLYFGDTQNKN
                     VSHVSRVVRAAQKAAPQARMSLFAGDLVSGGDNMDDSEWGEWFAATGWLAQETLVAPA
                     IGNHEYFEEFEDTPQERRVLGKHWPVTFALPGNGASAAQQTSYWFDAQGVRVAVVDGT
                     SALDLGTAKAQAQWLDKVLTGNPQPWTLVLLHQPFYSPREGRENAALRDVLLPVVRRH
                     NVDLVLQGHDHTYGRRGEGHAATPQYVVTVAGPKQYRLSDEARRTMDPVAEDTQLFQV
                     LNVDPQRLRYEARTVTGRLYDAFELQRDAKGSKTRTELTDGRVTPRDCPRSQTAKGRA
                     DRCWE"
     gene            12176..12790
                     /locus_tag="QEL58_000444"
     CDS             12176..12790
                     /locus_tag="QEL58_000444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012479786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic diphosphatase"
                     /protein_id="HDS1674967.1"
                     /translation="MTTPSRILPLAAIGTALLLLASAVTAADAVLHPFLVAQPKQAPQ
                     EANLAVEIPAGSFTKYEIKEDGLVHVDRFQSMPVAYPANYGSMPRTLAGDNDPLDALV
                     LTREPLHPGVIVRFRPIGYLKMIDGGEHDEKIIGVPTDKVDPTYANIRDLADLPEIER
                     QRIEAFFRVYKDLPAGRNPVQLNGWGNAAEARALISEAMQRFNR"
     gene            12879..14294
                     /locus_tag="QEL58_000445"
     CDS             12879..14294
                     /locus_tag="QEL58_000445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005416155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribodipyrimidine photo-lyase"
                     /protein_id="HDS1674968.1"
                     /translation="MSVALLWFRRDLRLQDNPALQAALEAGHEVVPVYIHAPHEEGEW
                     VPGAASDAWRHRSLAALDADLRSRGSSLVLRCGDSLATLQALVEQTGAEAVYWNRKYE
                     PATQPRDAEIKRTLREQGIDAQSCNGSLLFEPWDIATQQGQPYKVFTPYWRNVLSHWR
                     LPALTAAPKVLTAHPVDSLALDELRLSPALDWDAGFWEHWQPGEAGALEALSVFEDGA
                     LRGYREQRDLPDRVGTSRMSPHLHFGEIAPWRIAHALEGLRSAGTDADIDGYLRQLGW
                     RDFAYHLLHNFPKTPTDNLNPRFDRFPWADPSAAQLHDWQRGDTGVPIVDAGLRELWH
                     TGYMHNRVRMIVASYLCKHLRAHWLHGARWFWDTLVDADLANNTMGWQWVAGTGADAA
                     PYFRVFNPVTQAEKFDPQARYITRWVPELATLPLKARFAPWQHPLLLEAHAPGYPRTP
                     LVDLAAGRDAALVAYRQSGAG"
     gene            14434..15129
                     /locus_tag="QEL58_000446"
     CDS             14434..15129
                     /locus_tag="QEL58_000446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014646784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family lipoprotein"
                     /protein_id="HDS1674969.1"
                     /translation="MIRNTTRNVALALMSAAVLSACATGGSYVQSDQYGNPTEQQNRT
                     GRNALIGTAIGVAAGLLTGDSATERRQHALIGAGIGALSGAAVGQYQDRQERALRERT
                     ANTGIDVQRQGDNIMLNLPDGITFDFGKATLKPQFYGSLNGVAGTLRDYNQTMIEVVG
                     HTDSIGSDAVNNRLSKERADSVAQYLIGQGVQSVRIETLGAGKSYPIADNSTDAGRAK
                     NRRVEIRVIPLKQ"
     gene            complement(15489..16214)
                     /locus_tag="QEL58_000447"
     CDS             complement(15489..16214)
                     /locus_tag="QEL58_000447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008264799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HDS1674970.1"
                     /translation="MTPSRTILITGASSGIGAGIARSLAQPGARLVLGARRVDRLQVL
                     ADELRQQGAEVLVHALDVTRRAQVEAFAEAARQRFRAIDVIVNNAGVMPLSLMGSLKV
                     EEWDRMIDVNIRGVLYGIAAVLPGMIAQRSGQIINIASVGALSVVPTAAVYCATKYAV
                     RAISDGLRQEHRELRVTCIHPGVVESELADSITDPAAAEMMVGYRAIALQPDAIGRAV
                     RFAIEQPADVDVNEIVVRPTATV"
     gene            16333..17223
                     /locus_tag="QEL58_000448"
     CDS             16333..17223
                     /locus_tag="QEL58_000448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDS1674971.1"
                     /translation="MAIDLNALGVFQRVADCRSFTAAAEQLGVTRSAVSQTIAKLEQS
                     LGVALVLRTTRSVSLTDAGQALLVSVSPALAELGDALEASVRRQSAVSGQLRLAVSSI
                     AEAFLAGPMLAGFAARYPALQLDITVTDEAFDIVGAGFDAGVRLGEVIAQDMVAVPVS
                     ARQRQLVVCSPGYRDAHALPAHPRELASHRCIGWRSAPGRAPYRWEFEERGREFSVDV
                     QPEITSNDMGVMVRLALAGAGLAIGMEDTWRPWLQRGELVSVLDAYCPRFAGFFLYYP
                     SRRQAEPKLRALVGHVLSEL"
     gene            complement(17317..18348)
                     /locus_tag="QEL58_000449"
     CDS             complement(17317..18348)
                     /locus_tag="QEL58_000449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDS1674972.1"
                     /translation="MSHDLNETLIFVKVVEQGSFIAAAKSLGLPKTTVSRKVQELETR
                     LGARLLHRTTRRLGLTEAGSIYHEHCQRIARELEEAESAVSQLQSGPRGWLRFTVPYS
                     IGITWIAPLLGQFHAQYPEIRLDMHMGNEKLDLIAGEADLALRVGALPDSNLVARKLG
                     SLRTQVFASPAYIERYGEPLHPEELQFHRILAMRKPYHTGNSPRFTWQLGENGGELRD
                     FPVTPLMTANDMSALNGALVCGEGLLLTGDVMAKPFVESGMVRRVLAGWTGPEVDFNA
                     VFAGGRLVSPKVRAFVDFLVEKLNFDANYMLAQCPGAKLAQQQKAQEDAALESSGKRI
                     LEKVAASAA"
     gene            18496..18723
                     /locus_tag="QEL58_000450"
     CDS             18496..18723
                     /locus_tag="QEL58_000450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674973.1"
                     /translation="MSLRNILARLRNAGQNTLDLAMTVEARPSSLVHKDFREFTAPMR
                     QQRGGVIRLAPHKGDRLRRIGTIPDLGGNVP"
     gene            18720..19490
                     /locus_tag="QEL58_000451"
     CDS             18720..19490
                     /locus_tag="QEL58_000451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HDS1674974.1"
                     /translation="MNGMLTPEVLVLGGTGAVGQGVVGALLEAGSPVLVVGRDPGRLA
                     ALHEQFADEPGLETLLGSLSDDGSARALAERIAQRPRPLAAVIAAMGGPYRRGRVTDR
                     NGDELMGAMQADLMPHVHAVRHLLPLLQDNVHARRYVMIGSPANAKPWAGYGETSITT
                     AALRMYAQVVHQEAQALGVRAQMLEVCSPVCTPANAANACIEWPSSLLVGRRVVSLLD
                     GCRDNRAIVRCDSSDAELPRGLLHLEVPPLWRDTAGVA"
     gene            19582..20805
                     /locus_tag="QEL58_000452"
     CDS             19582..20805
                     /locus_tag="QEL58_000452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014036827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HDS1674975.1"
                     /translation="MTSPNTTPHRFGHRIAMAGVSILAAAVLAACSGGHAEEAGAPPP
                     PQVSAAPVLVKQVSQWDEFSGRVEAVQSVELRPRVSGYIDKVNYVEGQEVKKGEVLFT
                     IDARSYQAEYDRAAAELARARTQATLARSESERAKRLSEQQAISTETAEQRRAAADQS
                     GAAVQAAQAALDAARLNLEFTKVRAPIDGRAGRAMVTAGNLVTAGDSASVLTTLVSLD
                     TVFVYFDADESTFLRYAQMARKGERPSERDSDLPVKVGLSGEEGYPHSGKVDFLDNQV
                     ARSTGTIRVRALLDNADRQFTPGLFARVQLLGSGQFQAMLIDDKAVLTDQDRKYVYVV
                     DKDGKAQRRDIQLGRTAEGLRIVEHGLAAGDKVIIDGVQKVFMPGMPVQAKAVAMQPQ
                     AAPAPGRDATAALNH"
     gene            20933..24103
                     /locus_tag="QEL58_000453"
     CDS             20933..24103
                     /locus_tag="QEL58_000453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit"
                     /protein_id="HDS1674976.1"
                     /translation="MDFSRFFIDRPIFAAVLSIVIFAAGLITIPILPISEYPEVVPPS
                     VVVRTVYPGANPKVIAETVATPLEEAINGVEGMMYLKSVAGSDGVLQMTVTFRPGTDP
                     DAAAVKVQNRVAQAQARLPEDVRRQGVTTQKQSPTFLMVVHLTSPQGKYDTLYLRNYA
                     RLHVKDALARIPGVGDAQIFGGGDYAMRAWLDPDKVASRGLTASDVVRAMREQNVQVS
                     AGQLGAEPLPNSQFLTLINAQGRLKTEKEFGDIVLKSGVDGEIVRLADVARLELGAGD
                     YTLRSQLDGKNAVGIGIFQSPGANALEIRDQVISTMDEMQKTMPADVKYEAVYDTTIF
                     VRDSIKAVVSTLLEAIALVVLVVILFLQTWRASIIPLIAVPVSVVGTFAALYLLGFSI
                     NTLSLFGLVLAIGIVVDDAIVVVENVERNIEEGLSPTAAAHQAMREVSGPIVAIALVL
                     CAVFVPMAFLSGVTGQFYKQFAVTIAISTVISAINSLTLSPALAARLLKAHGAPKDGP
                     SRLIDRLFGWVFRPFNRFFKSSSEKYERGVARILGRRGAVFVVYAILLVGTGVIFKLV
                     PPGFIPTQDKLYLIAGVKLPEGSSIARTDEMLRKVAKIAQETDGVAHTISFPGLNALQ
                     FTNTPNTGVAFIPLKPFAERHGRTAAQINAEINQKIAGLQEGFAFAMMPPPILGLGNG
                     NGYQMFIEDRGNLGYGALQNAVQAMQGTVAQTPGMAFPISSYQANVPQLDAEVDRVKA
                     KAQGVQLTELFDTLQTYLGSAYVNDFNQFGRTWQVIAQADGPFRETVEDIGKLRTRND
                     RGEMVPIGSMVTIKQTFGPDPVLRFNGYPAADLAGEADPRLLSSAEAMNKLTEIAGKV
                     LPVGMTTEWTDLSYQQATQGKAAFIVFPVAIMLAFLVLAALYESWSLPLAVILIVPMT
                     LLSALFGVWLTGGDNNVFVQVGLVVLMGLACKNAILIVEFARELEMGGKGIVEAALEA
                     CRLRLRPIVMTSIAFIAGTVPLVLSHGAGAEVRSVTGITVFAGMLGVTLFGLFLTPVF
                     YVALRKFVTRNGGGQLVQHGEPTIHH"
     gene            24168..24905
                     /locus_tag="QEL58_000454"
     CDS             24168..24905
                     /locus_tag="QEL58_000454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005416162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HDS1674977.1"
                     /translation="MNSHQNKIALVTGATRGIGAETVRQLAQAGVHTLLAGRKRETAV
                     EQALKLQAEGLPVEAIQLDVTDAASIAEAVEQVRQRHGRLDILVNNAGIMIENPAQAP
                     SEQSLDTWKRTFDTNVYALVAVTQAFLPLVKQAKSGRIVNVSSMLGSQTLHADPASGI
                     YDFKIPAYNASKAAVNSWTLSLAYELRNTPIKVNTVHPGYVKTDMNGGNGEIEISEGA
                     RSSVEMALIGESGASGSFTYLGEVLPW"
     gene            24899..26320
                     /locus_tag="QEL58_000455"
     CDS             24899..26320
                     /locus_tag="QEL58_000455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010484411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux transporter outer membrane subunit"
                     /protein_id="HDS1674978.1"
                     /translation="MVIRTLAMAVSSLVLAGCVSVGPNYKAPVQEPVVLQGAQQPVFT
                     STSPVASWWAQFDDPVLEELVHGALSDNLDLRVAVARVSQARAVFVESRFDQAPHITA
                     GGSYDRRKQPDPQLGGQRVFSESYQLGFDAGWELDLFGRKRRAAEAARADLDAEQANL
                     ADAQVLIAAEVARNYFELRGTQKRIAVAQHTLVNLRDTQKLTEARWELGAGSELDVQS
                     SRARLKAIEADIPLLEVAETQSRNRLAVLLGQRPEVLTAMLAPHEVPAFAKALPLGDT
                     RELLRQRADVRVAERRLAAATARVGVATADLFPRLSLSGFVGFLGGDASGLVNGNNKA
                     WSLTPSLSWAAFDFGTVRARLRASKAEAEGVAAQYEQAVLLALEDTENALTRYSKQQA
                     RLAIVVEQAQAARRAESLAQIRYREGSEDFLTLLDAQRTQLAADDALAAAEAEVNVSV
                     VGVYKALGGWGQSPQPPSVAQLQ"
     gene            26569..26832
                     /locus_tag="QEL58_000456"
     CDS             26569..26832
                     /locus_tag="QEL58_000456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674979.1"
                     /translation="MTDGKHDTQRRLFGDPGPPGAGLSVAVVVLMVLASMAAAIGFIR
                     LPDPLLGLGLIGVSVFLAVGARICQARDQHQALYRLLSRQPPP"
     gene            complement(26852..27706)
                     /locus_tag="QEL58_000457"
     CDS             complement(26852..27706)
                     /locus_tag="QEL58_000457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease/exonuclease/phosphatase family
                     protein"
                     /protein_id="HDS1674980.1"
                     /translation="MLPRFHRRALCALLALALPAFACAATPAPLKVMSFNVRTPADTE
                     PGKRWPDRRDAMVKVILDAHPAVIGTQELVKEQADYLSEHLPGYRWFGEGRRGGSGDE
                     HMGVFYDSKVLAIEASGNFWLSDTPDVPGSITWGNLYPRMVTWALFRRLEDGRRFYFM
                     DTHLPYRDEDEPRRVKGAELIGKCLTTLPADLPVVLTGDFNSEPGGDTYKAFTHVLED
                     TRPQVKAPQGPRLTFHDFTGNATAQLDWVLVRGFHARSFLTDDRRIDGVLPSDHFPLV
                     VELDWPKR"
     gene            complement(27863..28105)
                     /locus_tag="QEL58_000458"
     CDS             complement(27863..28105)
                     /locus_tag="QEL58_000458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674981.1"
                     /translation="MKLHLASMAALMLAVGALSSPSQAAASGGGGGPENTNCVRVKMG
                     PYYHQRCEVTYFEEDGTPYIRVYWIDQNGQWYLPAD"
     gene            complement(28236..28469)
                     /locus_tag="QEL58_000459"
     CDS             complement(28236..28469)
                     /locus_tag="QEL58_000459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674982.1"
                     /translation="MKLQLAAMAALVVATATLAPVADANTGVPRENVSCVPVNVDRNR
                     VHHHCTETYTDEFGNVYTAEYWIDEYGNPYLRD"
     gene            complement(28556..29260)
                     /locus_tag="QEL58_000460"
     CDS             complement(28556..29260)
                     /locus_tag="QEL58_000460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005416167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autoinducer binding domain-containing protein"
                     /protein_id="HDS1674983.1"
                     /translation="MTALVQALLKLERARSLDAVGAVLHSIAAPLGYDRVLVFATGTG
                     LERGTQRVYWINGDWLGESGDADLARYLHACPVNRHVLDSDAPFFWSKRQGLRGERYQ
                     VVKQPRGEGLHGLQVPVFGTTGLEGAISFAGTSIDASASARLQLESAATAAFRAARRL
                     AEVPAALSGSRLSTREREVLRWVAAGRRQAEIAATLGLSARTVENHLRHARQRLGVAT
                     TAQAVRAATRRGEIED"
     gene            complement(29266..30138)
                     /gene="hchA"
                     /locus_tag="QEL58_000461"
     CDS             complement(29266..30138)
                     /gene="hchA"
                     /locus_tag="QEL58_000461"
                     /EC_number="3.5.1.124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008264623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein deglycase HchA"
                     /protein_id="HDS1674984.1"
                     /translation="MNTQEPSRQPSPDPAERDAFFPSPYSLSQFTSPKSNLSGADYPD
                     ARRDGRWKVLMIAADERYLPTANGHLFSTGNHPVETLLPMYHLDQAGFDIDVATLSGN
                     ATKFEWWAFPREDKQIGGLYERYEERFRQPLALDDVVAALGAGSDYAAVFIPGGHGAL
                     IGLPQSRAVKAVLHWAMAEQRHIITLCHGPAALLAAGVDEADGGSLFRGYRICAFPDA
                     MDRQTPEIGYMPGQLQWFFGERLAQQGVQIVNEGIDGSVLQDRLLLTGDSPLAGNALG
                     KLAARTLLDALAGR"
     gene            complement(30223..32232)
                     /locus_tag="QEL58_000462"
     CDS             complement(30223..32232)
                     /locus_tag="QEL58_000462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014646798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDS1674985.1"
                     /translation="MATTGLGFIGRTTLIITVLLTLGGCATLRQFGPSVQVASVTPGQ
                     YIALKRGDILTSGKLSAATTETLRVAGLDEGVCAKPGLPCIEAMEGSIVVREEDKRSS
                     LAELWLQYAMTLPAPKREYSASGRAKTAITELDADFQPRLDAWMQVARQAYAYLFFTE
                     RTANQRGFEDRQTQVRDYYNLAVQEASVQLYNAYATGRVHSEASHFQLGRWTFVLAPS
                     TEASPLNTRTPTELVPAASLSFTGTLRSVHRRDGFGAELVAVMDDPAGTTATTAPPTH
                     TAPATTQSWSEMPSPSMTVLLRFSGKNLWEVLHDDEPELEIHDPYQVTEVTLHGQEVP
                     LAANFTAGYALWLARSNFSHQSLRSLFGGKGGIDTPHLYMMQPYDPNRRVLLMIHGLA
                     SSPEAWVNVANELMRDDEIRQDFQIWQFYYPTNMPIAMSHDAMRHTLADVFRHFDPSG
                     KAQASHDMVLVGHSMGGVIARLMVSSSGDHLVDTLLATAQMTPAQRELLRTRGAPVLT
                     FLPEPEVSRVVFIATPHRGTDVAGTRLGRWIGRLVRLPLTVLEDVATIANDGQIDRND
                     GKHGYQMNSIQNLDKDDAFVRAVADLPMAPKVQYHSIIARAKADGPLEKTDDGLVPYW
                     SSHLPNAVSEKVIVSGHSVQEATPAIIELRRILHEDMQQHGAAAR"
     gene            32386..32847
                     /locus_tag="QEL58_000463"
     CDS             32386..32847
                     /locus_tag="QEL58_000463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004153220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenylcysteine carboxylmethyltransferase
                     family protein"
                     /protein_id="HDS1674986.1"
                     /translation="MRWLETRIPPPLVMLLCGGIGYLASRLAAGLAVPLPMPALLAGA
                     LVTLGVTLNLLPKLAFRCARTTVNPLRPSASSALVTHGVYRYTRNPMYLGQAIVLTGA
                     VLYLQNPVAWLAVPLFVLYITRLQIVPEERVLSARFPEAYALFRQRVRRWL"
     gene            complement(32960..33352)
                     /gene="ssrA"
                     /locus_tag="QEL58_000464"
     tmRNA           complement(32960..33352)
                     /gene="ssrA"
                     /locus_tag="QEL58_000464"
                     /product="transfer-messenger RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00023"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00023"
     gene            33572..34144
                     /locus_tag="QEL58_000465"
     CDS             33572..34144
                     /locus_tag="QEL58_000465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1674987.1"
                     /translation="MTEASQQRSLRQLVGPVGADYQRRALPPGWVWALLGLLLAATWL
                     TELPATAAAALVASAVVVHWAQRGRIHWLGWRLPGLAVLAALLWGPEVLSQWFEHGLA
                     VVLMSLASLSIGMHVWQSRQVARQLQVAADALDDAQLLALLPPDAAQLAQRWRAGDER
                     HAPELAVVMHLAVMHAALVPRMRKLGALAG"
     gene            complement(34262..34765)
                     /gene="smpB"
                     /locus_tag="QEL58_000466"
     CDS             complement(34262..34765)
                     /gene="smpB"
                     /locus_tag="QEL58_000466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011050971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SsrA-binding protein SmpB"
                     /protein_id="HDS1674988.1"
                     /translation="MSKNSGKDKAKSATANKTIALNKRARHEYHIEDRFEAGLALQGW
                     EVKSIRAGRGNIVDAYAYVKDGEIFLIGAQITPLIQASTHVVANDRRERKLLLHRSEI
                     DKLVGKVERDGYTIVPTAMYWSKNKIKLEVALAKGKQTHDKRDAAKDRDWAIEKQRVM
                     RRGNRDA"
     gene            34823..35248
                     /locus_tag="QEL58_000467"
     CDS             34823..35248
                     /locus_tag="QEL58_000467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017116146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RatA family
                     toxin"
                     /protein_id="HDS1674989.1"
                     /translation="MPTIRRSALVEHSAARMFDLVNDVQAYPRRFRWCSAAQILEQGE
                     DRLVARLDLGLGSFSTWFQTENTLQRPHSIDMQLRDGPFKQLHGRWEFHALAEDACKV
                     TLTLEFEPSSRLLGPALAIGFQGLADRMVNDFVRVADEG"
     gene            35252..35509
                     /locus_tag="QEL58_000468"
     CDS             35252..35509
                     /locus_tag="QEL58_000468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014036846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RnfH family protein"
                     /protein_id="HDS1674990.1"
                     /translation="MIEVEVVLAWPQRVLSRRLQLEEGATVADAIAAAALDGTAGCPA
                     VAVHGVLARPQQVLQEGDRIELLRPLLADPKDNRRRRALGG"
     gene            complement(35546..35938)
                     /locus_tag="QEL58_000469"
     CDS             complement(35546..35938)
                     /locus_tag="QEL58_000469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006449455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamE"
                     /protein_id="HDS1674991.1"
                     /translation="MRNLLLVAAVALSTTGCGIIYKQPIYQGNLIREDAVAKLQVGQS
                     KQQVTALLGTPSIPDPFHAQRWDYTSSQRVNRLGRTEVKNFVVFFDNDTVTRWEGDYF
                     PGNDKALAQQTVRQFGRNLPKDKKKKGR"
     gene            36042..36449
                     /gene="fur"
                     /locus_tag="QEL58_000470"
     CDS             36042..36449
                     /gene="fur"
                     /locus_tag="QEL58_000470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferric iron uptake transcriptional regulator"
                     /protein_id="HDS1674992.1"
                     /translation="METHDLRKVGLKVTHPRMRILALLEQRNAQHHMTAEDIYRQLLE
                     HGDEIGLATVYRVLTQFEAAGLVLKHNFEGGQAVYELDRGGHHDHMVDVDSGKIIEFE
                     SHEIEELQRKIAADHGYELEEHSLVLYVRKKRK"
     gene            complement(36508..37752)
                     /locus_tag="QEL58_000471"
     CDS             complement(36508..37752)
                     /locus_tag="QEL58_000471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SGNH/GDSL hydrolase family protein"
                     /protein_id="HDS1674993.1"
                     /translation="MDRLRKLAASTLLALSGAASATPAPHWVASWQASPQPVWGADFL
                     FPALIPASLHDQTFRQAARISLGGPRLRVRLSNAYGTQPLRIGAASVAARPGAAPRPL
                     HFDGQPGVLIGAGQERLSDPLALPTGNQQALQVSVFVPGPTPLQTFHWDGRQTSWIAG
                     GNQSLARDLDRATPTTARLFLTGIEVEAAPGARSVVVIGDSITDGATASLDQDQRWTD
                     HLAARLAPRGVAVVNAGISGGRLLRDGMGESVLARLQRDALDQPSVASVIVLIGINDI
                     SWPGTAFARQQARPTLAELQDGYRALAEQAHRRGLRILGATLPPFAGALPGTPLDDYY
                     QPGKEALRQQLNTWLRTRSPFDAVIDLDAALRDPADPSRMAAAYDSGDHLHPGDAGNQ
                     AMAEAVDLEVLMGPSAHGVDLL"
     gene            37850..38767
                     /locus_tag="QEL58_000472"
     CDS             37850..38767
                     /locus_tag="QEL58_000472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDS1674994.1"
                     /translation="MARPDINRSGELEVFVRVIETGGFSAAARTLDMTPSAVSKLVAR
                     LEQRLGTRLLQRSTRQLQLTPEGCAFYERGLRVLADLEEAERCASAHAEPRGRLRVNS
                     NVPFGQHFLLPLLPAFLERNPQVGVDVTLNDEVIDLLEQRTDVAVRAGPLKSSSLVAR
                     RLGATRMMIVAAPAYAQRHGLPASVEELQAHNRLDIGHARAMQGWPLLQDGRERMLLP
                     SGNARASNGDALRQLVLGGLGMARLAAFQVQADIAAGRLLPVLEEANPGDLEEVHAVF
                     LGQGGYLPLRVRAFLDFLVENVDLTQPRG"
     gene            complement(38899..40560)
                     /gene="recN"
                     /locus_tag="QEL58_000473"
     CDS             complement(38899..40560)
                     /gene="recN"
                     /locus_tag="QEL58_000473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecN"
                     /protein_id="HDS1674995.1"
                     /translation="MLRHLSIKDFAVVRATELEFGPGMTVVSGETGAGKSLMVDALGF
                     LSGLRADSGVVRHGAARAELSAEFALDQLQAARQWLADNELDDEDQCQLRRVIRADGG
                     SRSWINGRPVTLAQLADLAALLVEIHGQHEQQALLTRPSQLALLDAYARNEDARRQVR
                     RAAAAWQALVDESLALSQQGDVSDRMGFLEHQLRELDREDLEPESIAALGASHRRQAH
                     ASALLTACQAASNQLNGDDGSSALDLLQQVRHELSRLIEHDPRLGEVDGLIENASIQL
                     HEALSLLDRVHDDLDADPEQFEENERRLGRLHDLARKHRVPMDELGAQRERMHAEVEQ
                     LRGADERLQRLAGEIDKAAAAWRVQAEVLTASRRGAAAELSATTTGIIAELGMGGGQF
                     LIELEPQDNGKPDPQGAERVEFLVAANAGQPPRALRKVASGGELSRISLAIEVAALDL
                     DAVPTMVFDEVDSGIGGAVADIVGQKLRALGEKRQVLCVTHLPQVASKGHAHYRVSKA
                     PVEGMTQSAVEKLDSKAREEELARMLGGVEVSKEARAAARKLLQV"
     gene            40675..41739
                     /gene="hrcA"
                     /locus_tag="QEL58_000474"
     CDS             40675..41739
                     /gene="hrcA"
                     /locus_tag="QEL58_000474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heat-inducible transcriptional repressor HrcA"
                     /protein_id="HDS1674996.1"
                     /translation="MHGSPDQLAPRARHLLRTLIARYIQDGEPVGSQTLARVAGLEVS
                     PATIRNILGDLEDLGLLASPHTSAGRIPTAHGYRVFVDSLLQMQPPGEGELARLRQEL
                     AGGGSTQALLGSASELLSAMSHFVGVVSAPRREQFAFRQIDFVALDGRRVLAILVFAD
                     NEVQNRVIETRQEFAPGQLEQVANYLNSHFAGLPMAEIRTRLLLELRDARSELEQLLA
                     HSIELAEQALQPAADDMLVAGQTRLMGVQDLSDLERLRELFELFSSKREILQLLERTI
                     QAPGVRIFIGEETGMMPLQGVSLVTAPYTANGQVLGVLGVIGPKRMAYDRMIPLVQAT
                     ADVLGAAFSPAGRTPGTSDA"
     gene            41803..42318
                     /gene="grpE"
                     /locus_tag="QEL58_000475"
     CDS             41803..42318
                     /gene="grpE"
                     /locus_tag="QEL58_000475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010484465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide exchange factor GrpE"
                     /protein_id="HDS1674997.1"
                     /translation="MNHEHPDIESQQTAADAAATAGVNDELERLRAEVEQVRADALRE
                     RADLENQRKRVARDIEQARKFANEKLLGELLPVFDSLDAGLKAAGDDPHPLREGLELT
                     YKQLLKVAADNGLVLLDPTGQPFNPEHHQAISQVPTPGAAPGTVVTVFQKGYLLNERL
                     LRPALVVVAAD"
     gene            42474..44399
                     /gene="dnaK"
                     /locus_tag="QEL58_000476"
     CDS             42474..44399
                     /gene="dnaK"
                     /locus_tag="QEL58_000476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010484469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaK"
                     /protein_id="HDS1674998.1"
                     /translation="MGKIIGIDLGTTNSCVAIMDGGKARVIENSEGDRTTPSIVAYTK
                     DGEVLVGASAKRQAVTNPKNTFYAVKRLIGRKFTDAEVQKDIAHVPYGILAHDNGDAW
                     VSTSDGKKMAPQEISAKVLEKMKKTAEDFLGEKVTEAVITVPAYFNDSQRQATKDAGR
                     IAGLDVKRIINEPTAAALAYGLDKGDNKDRKIVVYDLGGGTFDVSVIEIANVDGEKQF
                     EVLATNGDTFLGGEDFDNRVIEYLVEEFNKDQGIDLRKDPLALQRLKDAAERAKIELS
                     SAQQTEVNLPYVTADASGPKHLNIKLTRAKLEALVEDLIKKSIEPCRVALNDAGLRSS
                     DISEVILVGGQTRMPKVQQAVTEFFGKEPRKDVNPDEAVALGAAIQGGVLGGDVKDVL
                     LLDVTPLSLGIETMGGVFTKIIEKNTTIPTKASQVFSTAEDNQSAVTVHVLQGEREQA
                     RFNKSLAKFDLSGIEPAPRGLPQVEVSFDIDANGILHVSAKDKKTNKEQKVEIKAGSG
                     LSEEEIARMVADAEANREEDKKFQELVQARNQADALIHGTRSAITEHGSKVGGEVIGK
                     VEAALAELETAMKGDDKAQIEAKSKVLEEAGQSLFAAASADQGGAAPGADAGNAGKGN
                     DDVVDAEFTEVKDDKKS"
     gene            44553..45680
                     /gene="dnaJ"
                     /locus_tag="QEL58_000477"
     CDS             44553..45680
                     /gene="dnaJ"
                     /locus_tag="QEL58_000477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012438731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaJ"
                     /protein_id="HDS1674999.1"
                     /translation="MSKRDYYEVLGVARTATDDELKKAYRRCAMKFHPDRNPGDAAAE
                     ASFKECKEAYEVLSDGNKRRMYDSHGHAAFEHGMGGGGGPGGPDMNDIFGDIFGNIFG
                     GAGGGPRQARRGADIGYVMELDLEEAVRGVERRIEIPTLAECGDCDGSGSEDGKVETC
                     NVCHGRGQVRIQRGIFAMQQACHNCGGRGQIIAKPCKTCHGNGRVEEDKVLSVKVPAG
                     VDTGDRIRLQGEGEAGPAGTPPGDLYVEVRVREHAIFQRDGDDLHCEVPIRISQAALG
                     DTVRVATLGGEAEIRIPAETQTGKLFRLRGKGVRSVRSRSEGDLYCRVVVETPVNLTN
                     EQRKLLEQFEATFVGEEARKHSPKSATFMDGVKGFWDRMTS"
     gene            complement(45741..46538)
                     /locus_tag="QEL58_000478"
     CDS             complement(45741..46538)
                     /locus_tag="QEL58_000478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDS1675000.1"
                     /translation="MAYRKKDIASDVDPAAPWRDVPQHRPVTYRVTQYPAGTHIAGHK
                     HQRHQLVYAISGLMVVRSEVGRWVVPSTRAIWMPAGMVHAVDCIAAVHMRSLYIDPLF
                     APQLPAEPFAVQVAPLLRELLQAATLIKGEHVEDSRDGRVVRLLLDELHRMDVLPLHL
                     PAATDPRLQRICQHIQKQPGDDATLQDWAQALEVDVKTIQRRFGSELGMTFGQWRQQA
                     RLLAAMERLAVGDKVIDVALAMGYDSPSAFTSMFKRQLGQTPAAFFR"
     gene            46611..47810
                     /locus_tag="QEL58_000479"
     CDS             46611..47810
                     /locus_tag="QEL58_000479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005416188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDS1675001.1"
                     /translation="MSALASPATTSRPVAPGVLAAISTSHVVNDMMQSLILAIYPVIK
                     GGFNLSFTQIGLITLTYQLTASIFQPLVGMATDRRPAPYSLPIGMASTLCGMLLLGFA
                     SSYAVVLLAAAMVGIGSAIFHPEASRIARLASGGRHGFAQSVFQVGGNFGTALGPLIA
                     AAVIVPYGQHAASWFAGAALIGIALLTYVGRWYALHLGTPRPASTASMAPRHPPRTVA
                     KVLAILLVLIFSKYFYMASIGSYFTFYLIHHFGIPVAQAQLHLFAFLVASAAGGFLGG
                     PLGDRIGRKPIIWTSILGVAPFALMLPHADLFWTTVLAVLIGFVLSSAFSAIVVYAQE
                     MMPHRIGMVSGLFFGFAFGMGGLGAAVLGLLADKTSIEYVYQLTAFLPLLGIVAAWLP
                     PSRPAAH"
BASE COUNT         7983 a        15725 c        16257 g         7962 t
ORIGIN      
        1 ccccgccaac caacaggaaa ccggcttttg aagttgcttc ggctgttgct gtggcctctg
       61 cgggttccgg gcgccgcccg gacgactaca atccccttca tgctgaaatt ctcgaatacc
      121 tcccgccggg ggcgccggtg agcggccgtg gtggcaatga cggccaggtc cgcatcatcg
      181 gtggccgctg gcgcaatacc cgcctgccgg tgccgaccct gccgggcctg cggccaagca
      241 gcgaccgcgt tcgcgaaacg ctgttcaact ggctgatgcc ccggctgggc ggggcgcggg
      301 tgctcgacct gttcgccggc agcggcgcgc tgggcctgga ggccgtctcg cgcggcgccg
      361 cccacgccac cctggtcgag cgcgatgccc agctcgggcg caacctgtcc gccgccgtcg
      421 ccaagctgca ggcggtagac caggtcaccg tggtccaggc cgatgccctg cgctggctgc
      481 aaagcgcccc ggcgcagcag gccgacctgg tgttcatcga cccgccgttc gccgatggcc
      541 tgtggcagga cgtgctggcc cagctgccgc ggcacctggc cgccgatgcc tggctgtacc
      601 tggaatcgcc ggccggccac gtcccgtcac tgccggcgga atggctgctg caccgcgagg
      661 gcggcacccg tgaggtgcgc tttgccctgt accgccgcgc cactgctaca ctttgacttc
      721 atctgaacat ctgcatccgc ccatgaccgt ggccaaccgc cgcattgccg tctatcccgg
      781 cacgttcgat ccgatcacca atggtcatat cgacctggtg agccgggccg cgccgttgtt
      841 cgaaaaggtc gtggtgggtg tggcgcagag cccgtccaag ggcccggcgc tgccgctgga
      901 acagcgcgtg cagctggccc gcggcgcact gggccaccac ggcaatgtcg aggtcatcgg
      961 cttcgatacg ctgctggccc atttcgtccg ttcggtccag gggggggtgc tgctgcgcgg
     1021 cctgcgcgcg gtgtccgact tcgaatacga gttccagatg gccagcatga accgccatct
     1081 gatccccgag gtcgagaccc tgttcctgac cccggccgag cagcacagct tcatttcgtc
     1141 ctcgctggtc cgcgagatcg cgcgcctggg cggtgacgtg tccggtttcg tgccggccgc
     1201 ggtgctcgaa gccctgcgca aggtccgcga agcgaagtcg gcacagtcgt aagtcccgct
     1261 gtacccgcac cccattacgt acaccaccac gcaccattcc gggaggaaac ccatgaacac
     1321 caccatgcgc gcgatgctga tcgcttcgtt ggccctggcc ttcaccgcct gcaagaagga
     1381 agaggccgct ccggtcgacg aagccaagca ggcgctggtc gcgccgtcca aggacgacga
     1441 tgcaggctgg aagaaatacc tgcaggaagt ggccatccag aacatgggca acatcaccaa
     1501 cagcccgttc ctgtactacc tctcgccgga atcggacccg gacttccagg ccaagtacga
     1561 gcgccagacc gagagcgcga cccaggccgt ggcccgtggc gtgcagccgg gcaacatgct
     1621 ggccttcggt tcgtcggcct cgggcaagat ggctgacatg atccaggccg tgttcaagga
     1681 cgtggggccg gattcgatga agggcgtgcg cgtcgtcttc atcggccagt cggccgacaa
     1741 cgcccgcgtg caggctgcga tccagccgac cggtgccgag tacattttcg tcgaagccaa
     1801 gtaagaccga gccatggcgg ccatgctccg gcatggcccg ggcggcgctc cgcaagcgcg
     1861 ccgctgatga cctgaccggc ccgcgcgccc gcgctggccg gtccttgtcc caaggcgcgg
     1921 gcgaggagta tcgccatgtc gctgaaaatc aacgagctct gcgtcaactg cgacgtatgc
     1981 gagccggcct gcccgaacca ggccattgcg atgggtgaaa ccatctacgt gatcgaccct
     2041 gcgcgctgca ccgaatgcgt gggtcatttc gacgagccac agtgcgtggt cgtctgcccg
     2101 gtcgaatgca tcgatccgga cccggagatc gtggaaacgg aagaccagct gctggccaag
     2161 ctgcgccagc tgcagcacga tcaccccgaa ctctatgcgg agcccccatc cgaatgaaga
     2221 cgctgatcgt ccgtccgctg ttgctgctcg gcctgctgct gagcccgatc gcctgggccg
     2281 acagccctgt ccgtgccgaa cgccccgacg gcgccgccat tgccagtggc catgcgctgg
     2341 ccacccaggc cggcatcgac atcctggcgc agggcggcaa tgccttcgac gcggcggtgg
     2401 ccgtatcgtc cacgctggcg gtggtcgaac cgatcagttc cgggctgggc ggcggtggct
     2461 tcttcctgct gcacgacgcg gccaccggca aggatgtgat gctggacgcg cgcgagactg
     2521 caccggctgc ggcaacgccc caggcgttcc tcgacaagca gggcaacctc gaccgtgacc
     2581 gctcggtcaa cggcgcctgg tcggcgggca ttccgggcct gcctgcggcg ctggtcgaac
     2641 tgtcggccaa gcatggcaag ctgccgctgt cggcgtcgct gcagccggcc atccgcatcg
     2701 cgcgcgaagg tttcccggtg tacgagcgca tggccaaggg ctatgcctcg cgccgtgaag
     2761 tgatggagcg cttccccggc acccgcgagg tctacctgcg caacggcaag ccgatcgcca
     2821 ccggcgacct gttcaagcag ccggaactgg cgcagacgct ggaacgcctg gccgccggtg
     2881 gcttcgacgg cttctacagg ggccagaccg gcagactgct gctggaaggc gtgaagcagg
     2941 ccggaggcaa gtggaccgcc gaggaactgg ccggataccg ggtgaagcag cgcgaaccga
     3001 tcgtcttcaa ctacaacggc tggaagatca ccacggcgcc gccgccgtcg tccggtggca
     3061 tcgcgctggc cagcatgctg cagatcctcg aaggctggga catcaagaag atggacccgg
     3121 cccaccgcac ccacctggtg gtggagtcga tgcgccgcgc ctaccgcgac cgcaccttct
     3181 tcctgggtga tccggacttc gtgcagatcc cgcagaaggt gctgaccagc aaggattacg
     3241 cgcagggcct gcgggccacc atccatccgg agaaagccac gcccagcgac ctgctgtcgg
     3301 gcaatccgac gccgctggaa gatgacgaga ccacccactt ctcgatcatc gaccgcgacg
     3361 gcaaccgcgt cggtgccacc cagaccgtca acctgctgta cggctcgggg ctgattccga
     3421 agggcaccgg cgtgctgctg aacaacgaga tggacgactt cgcgctgaag ccgggcacgc
     3481 ccaacgcgtt cggcgtgatg ggctatgaag ccaatgcgcc gaaggcgggc aagcgcatgc
     3541 tcagctcgat gacgcccacc ttcatggaga acgccgacaa ggtggtggtg ctgggcaccc
     3601 cgggtggcag ccgcatcatc accatggtgc tgctgggcat cctcggctac gacgccggtc
     3661 tggacgcaca gcaggtggct gcgctgccgc gttaccacca ccagtggctg ccggacctga
     3721 tcgaagccga agacgatgcg ttcgatgccg gcacggtgaa gcagctgcag gcgatgggcc
     3781 acaggatcga cctgccaggc aacgtcgctg ccggtggccg cggttccagc catgtgtggg
     3841 gcaacctgca gaccgtggaa tgggaccgca agtccaacac gctgttcggc ggcagcgacc
     3901 cgcgcaaccc ggtgggcagc gcccaggtcg tgccagcgcg ctgatccggt tgtgccggcc
     3961 gctggccgga aatccgctgg atcatcgaaa ccccgcccgc aacggcgggg ttttccgttt
     4021 cctttctagc gattatttaa cgagccggcg ccgataatcg actcatgaaa ctctggtcta
     4081 ttcgtggaaa ctcgcagcgc ctcgatggcg gtgcgatgtt cggcaacgcg ccgcgcgcgt
     4141 tatgggaaaa atgggcagcg ccggacgagc tcaaccgcat cgagctggcc tgccgtgcgc
     4201 tgcttgccag cccgctggaa ggcaagacgg tgttgttcga aaccggtatc ggcgcgttct
     4261 tcgatccgcg catgcgcgag cgctatggcg tgcaggaaag ccagcacgtg ctgatcgatt
     4321 cgctgcgcga agccggtttc gaacacgagg acatcgatgt ggtggtgctc agccacctgc
     4381 acttcgatca tgccggtggc ctgctggcgg catggagcga agggcgggag cccgagctgc
     4441 tgttccccaa cgcgacctac gtggtgggcg cacagcactg gcagcgcgcc gtgcagccgc
     4501 atccgcggga tcgggccagc ttcattccgg agctgccggg cctgctgcag gccagtggcc
     4561 gcctggaagt ggtggacggg gaatactcca aggcgttggg gcgcagcgtg cgtttcagct
     4621 acagcgatgg ccacacgcca gggctgatgc tggccgagat cgtcggccat gcacatgccg
     4681 gcgagggtgc gcatggtggc gtggtgttct gcgccgacct gattccgggc cgctcatggg
     4741 tacacgtgcc gatcaccatg ggctacgacc gcaacgccga gctgctgatc gacgagaagc
     4801 ggcagttcct cgaggacaag ctggcgcgca acgtgcatct gttcttcacc cacgatccgc
     4861 aggtggcgtt ggcgcagctc ggtcgcgatg acaagggtcg tttcgtcacc ctgcatgagc
     4921 agggtgaact gaaggcgcgc gcattggggt aatgaaatgg ccgggcaatg cccggccctt
     4981 cactgatgca gtagaaccac gccatgcgtg gatggcgttc tatccgggcg cgacgattac
     5041 gacgccttca ggcagctgct catgaaggtc ttgcgtgcat cactggccag cttcttggcg
     5101 cccgcatcgg cattgcactt gcgcatgcgc tcctgctgcg ggttgaccgc cttggtttcg
     5161 gtggcgtggc cgctgaggca ggcgctctgc gcggtcttgt aggcgtcgcc cttcagcccc
     5221 ttgttcttgg ccgagcagtc ggccatgcgc tgctgctgcg gggtggtggc gttggcggcc
     5281 agcggcaggc cgaccagaag aacggcggcc agcaggaaag aggctttcat cagggtgctc
     5341 caggcggtgg cgggtgcgcg gagcattcgc ttccggcccg caaggccacg tgaagaatcg
     5401 ctgcccggtc gcgcctgctt gcgtcggcat tcagatcggc gtattactta gccatatggg
     5461 taagtatgat cccgccattc aacggatctt ccacgccctg gccgacccca cccgttgcgc
     5521 gatcgtggcc gcgctggggc aggggccgtg cacggtgtcg atgctggccg agccgttaca
     5581 gatggcgttg ccttcgctga tgaagcacct ggccgtgctg gaacgcagcg gcgtcgtgcg
     5641 cagccacaag caggggcgca tacgtacctg cgaactggtg ccggcgcggc tgggccaggc
     5701 cgagcagtgg ctggccgaac agcgcgtcct gtgggatgcg cgtgccgacc gcatggtcga
     5761 tttcgtcgaa acccttcacc gacaggagca ggctcatggc cgaggacgca agtagcaatc
     5821 cggacaccga tctggtcatc agccgcttgt tgaacgcacc gcgcgcggca ctctggcggg
     5881 cctggacaga ccccgaactg ctgcgccagt ggtggtgccc gaagccgtgg accaccgagg
     5941 tgcgtgcgtt cgacctgagt cctggcgggg ccttccacac cttcatgcag ggccccgatg
     6001 gcggcagcag tgacaatccg ggcagcttcc tggaggtggt gccgcagcag cgcctggtgt
     6061 ttacctcgat gctgggcgcg ggctggcgcc cgcagtcacc gtggctgggc ttcaccgcca
     6121 tcatcacgat ggaggacgag ggccagggct gccgttacac cgcgcgggtg atgcatccgg
     6181 acaaggcgct gcgcgaccag catgagcagc tgggcttctt cgacggctgg aacaccgcca
     6241 tcggccagct ggaggccttc gcggccgggt tgtaatgccg tgcctggggt cagatcccct
     6301 tcgcagcgaa agggttctga ccccggttca gcggatcaac cgacgcgggt accgaagatg
     6361 cggtcgccgg catcgcccag gcccggcagg atgtagccct tgtcgttgag ctgggcatcg
     6421 atggccgcgg tgtagatctc cacgtccgga tgcacggcct tgaccgcgtc gatgccttcc
     6481 ggcgcggcga ccaggaagat gcccttgatg cggcgggcgc ctgcgcgctt gagcatgtcg
     6541 atggtggcga tcagggtgcc gccggtggcc agcatcggat ccaggatcag cgcatcgcgc
     6601 tcttccaggc gaccggtcag gcgctcgaag tagggcaccg gctgcagggt ttcctcatca
     6661 cgctgcaggc cgaccacgct gacgcgggcg gccgggatca gcgacagcac gccgctgagc
     6721 atgcccaggc cggcacgcag gatcggcacc acggtgatct tggcgccggc gatgcgctgc
     6781 acggtgaccg ggccggccca gccgggcagg gtgtgcggct cggtgtccag gtcggcggtg
     6841 gcctcgtagg ccagcagcgt gcccagctca ttggccagtt cgcggaaatc cttggtgctg
     6901 agtgcggcgt tgcgcatcag gccgatcttg tgctgcacca gcgggtggcg cacttcgacg
     6961 atcttcatgg tcgggaaggg gaaaaggaga gaggacgcca ttttgccgga tcggtgggcc
     7021 gaacccaaac ccgcgcttcg tcaaatgtgc agatccatgt catggccatg caaccttgcg
     7081 gacataccgt gcagacccat tcttaacagg aatggggatt cccagtgcat atcaagactc
     7141 cgttggccgt tgccatcacc ctgaccctgg cgatgggggc ggttgcaccg ctgcaggccg
     7201 ccgggcagca ggcggttgcc gccaccggcg cggtggccgc cgacgcggtc gacctcgacc
     7261 gcatcgaagt gcgtgcgcag ctcgaatcgc agatccgcgc ggtcgacctc aagcgcagca
     7321 gcgatgccat cgaggacgcc gtgtcctccg atgccctggg tcagtacccg gacaagaacg
     7381 tggccgagtc gctgcagcgc ctgccgggcg tcagcgtgac ccgtgaccag ggcgaaggcc
     7441 gctttgtggt catccgcggc ctggacgcca acctcaacag cgtcagcgtc gatggcatcg
     7501 ccatcggcac gccggaggat tccagccgcg ccgcgccgct ggacgtcatc ccgtccgatt
     7561 ccaccgagcg cctgcgcgtg gtcaagtcgc caaccccgga catgccgggc gatgccattg
     7621 gtggcgcggt gctggtggag tcggcttcgg ccttcgaccg cgacggccgc agcctgcgcg
     7681 ccaagatcga gggcagccac cagcagctgt ccggcgagac cagccccaag gccgccttca
     7741 actacagcga agtgttcaac gacaccttcg gcgtggcact gggcgtgaac taccagaagc
     7801 gcaagttcga gtcggacaac accgaagtgg aatacgacgg cgaggatgat gccgcgcctg
     7861 gcgacgtcac tgcgatcaac ctgcagcacc gcaagtacga gatcgagcgc aagcgcatcg
     7921 gtgccaacct caacctcgac tggcgcccga acgaagacag caagtactac ctgcgcacac
     7981 tgtacagcca gttcgacgat gccgaaaccc gccagcgggt gatcttcaac ttcgatgacg
     8041 cgaagatggt caagaccggc accgaccagt accgcctgga tggcatgccg aaggattcga
     8101 tcgacaagcg catgcgctac cgcaccaaga aggaaaacac ctttgcggca agcctgggcg
     8161 gcgagaacaa gctgaccaat gccgtggtcg attacaaggt gggctacacc cgcaccgaag
     8221 agcgcgtgaa cgacgagatg gaggcccgct tcaagctcaa cggcgcgccg ttcaacggca
     8281 ccctggacca gcgcagccga ctgcccagct acagtttcga caacccgcag tggctggaca
     8341 acggcaacta cgcgttcgac cgcttcgtgc tctcgcccaa gcaggtcaat gacaaggaac
     8401 acagcgcgca ggtcaacgtg cgcttcgacg gcgacagcgg cagcatcaag atcggcctgc
     8461 tgggccgctg gcgcgaccgc gacgtcaacg ttgatgagag cgagctgcgc gtcggcccga
     8521 aggtggcgct gtcgagctgg accacctcct cgccggagca ccgccacggc aacatgggtg
     8581 acggtatgga ttcggccgcg atgcgcgcgt tctgggcggt caatggcagc cagtacagtg
     8641 cgcggccgca ggatgtcggc ggcaatgcaa tgacctcgct ggaagaagac tacgtggcca
     8701 gcgaggacat cttcgccagc tacgcgatgg gtacctggga catcggcgca ctgcgcatca
     8761 tcggcggcgt gcgcgtggaa aacacccagt tcaaggccac cggcaaccag gtggacgtgg
     8821 cggccaacgg ccgcagcttc accgtcaccc cgcgcgtggc caacagcagc tacaccaacg
     8881 tgctgccggg cctgcacctg cgctacgacg ccgcagacga ctgggtgctg cgcgcttcgg
     8941 ccaacaagac cgtatcgcgc ccgtcgttcg gtgacatttc gccgcgcgtg ggctacagcc
     9001 gcggtgacga ggaagtgcgg ctgggcaatc cggagctgga tccttacgaa tcgaagaaca
     9061 tcgatctgtc ggtggagaag tacatcggca gcaccggcat cgtgtcgctg ggcctgttcc
     9121 acaagtcgat cgacggttac atcgtggaaa ccgtgcgcac caatgacccg gactacggcg
     9181 gcttcgacgt gacccagccg atcaacggcc gcaaggccac ggtgcgcggt gcggaattca
     9241 actggcagca gcagctggcg ttcctgccgg ccggcctgga cgggctgctg gtcggtgcca
     9301 gcggcacctg gctcgacact acgttcgatg ctggcatcaa ggatcgtgcg ggcgaagact
     9361 tcaccctgcc gcgcgcctcc aagcacgtct acagcgcaca catcggctat gaaaagtatg
     9421 gtctgagcac gcgactggcg gcggtgtacc gcagtgaata cctggacagc atcggcaagg
     9481 gccgtgcctt cgacatctat gtggcgccca atacccagct cgacttctcg ctggactaca
     9541 agttcacccc gcgcgtaagc atgtatttcg aagcgcagaa cctgctggac aagccgcttg
     9601 agctgtacca gggcacgcgc tcgcgcaccc tgcagatgga agagtatggc cgcacctacg
     9661 cgctgggcct gaaggtggca ctgtgatggg gcgtggtatc accgtcctgg ctgccgcact
     9721 ggtggccagc ctggcggctg gctgtacgtc ggccacgggc aatgatccgg cggcgcccgc
     9781 gacggcagcg aaggccaccg gcgagcgtgc ggtggccacc atcgccgagg cgttcctgtc
     9841 gccgatgacg ccggccgaca acatcgattc gccggcggcc tggcgtgcac cggacggagc
     9901 gctgtggctg atcgccaccg ccaaggccac cgacaagctg gtggtctacg acggcagtac
     9961 cggccagcat ctgcgtgacg ttggcagcag cggtaccgcg aaggggcagt tcgaccgccc
    10021 aaacggcatc gcggtgaccg acgacctgct gtggatcgtg gagcgcgaca atcaccgcgt
    10081 gcaggtgctg agcctgccgg acttcacccc gctggcgacg ttcgctgcgg acgacctgcg
    10141 caagccgtac ggcctgtggg tcgaccgccg ggccgatggc tacagcgtct acgtcaccga
    10201 ctcctgggac aacggcgagg atgcgcaggg gcgtgacatc ctgccgccgc tggctgaact
    10261 ggacaagcgc gtgcgccagt accacgtgac ccgcgacggt gccaaggtcg aggcgacgct
    10321 ggtggccagc atcggtgata ccaccgaggc cggtgcgctg cgcgttgtcg aatcgatctg
    10381 gggcgacccc gaaaacgatc gcctgctgat tgccgaagag gacgaaagct acgccagcga
    10441 gttcaaggtc tacaccctgg ccggccgctt caccggcacc accttcggcc gcgaagtgtt
    10501 caaggcacag gccgaaggcg tgaccctgcg cacctgtggc aaggacggct ggtggatcac
    10561 caccgagcag ggcaagcagc gcagcgtgtt ccacctgttc gatcgtcaca cgctgaagcc
    10621 ggtgggcgcg ttccagggca acaccgtggc caacaccgat ggcatctgga tgatgcagca
    10681 gcccagtgcg cggttcccac acggtgcgct gtatgcggtg catgacgacc agggcgtggt
    10741 ggcgttcgac tgggagagca tcgccaagca gctcgcgctg ccgctggagt gtggcgcatg
    10801 agcgggcgtc acatgatgca tggcctggcg ctgggcctga tgctggcgtt gccgtcgctg
    10861 tcgttcgcgg cggccgagcc gaatacccag gtgccggcgg gcagccgcca ctacgcagcg
    10921 acgacggtgc cggaccgcat cgtcgcctcg ccgtcggctg atcccagcca cgctttcgcc
    10981 gtggcctggc gtaccgatgg cagcgtgcag gcgccactgc tggagatcgc gctggctgca
    11041 gattcgccgg ccatcgaggg catccgtcag gtgcgtgcga cgacgcgcgc actgcagacc
    11101 gaaaacgggc tgtcgcatca ccatcgtgcc gacatcggcg gcctgcagcc ggatacccag
    11161 tacgtctacc gcgtgcaggg caatggcagc tggagcgcgt ggaaccagct gcgcacgctg
    11221 gcggccgccg accagccgct gaccctgctg tacttcggtg acacccagaa caagaacgtg
    11281 agccatgtca gccgggtcgt gcgtgctgcg cagaaggcgg caccgcaggc gcgcatgagc
    11341 ctgtttgccg gcgatctggt cagcggcggc gacaacatgg acgacagcga gtggggcgaa
    11401 tggtttgcgg ctaccggctg gctggcgcag gaaacgctgg tggcgccggc aatcggcaac
    11461 cacgagtact tcgaggagtt cgaggacacc ccgcaggagc gccgcgtgct gggcaagcac
    11521 tggccggtga ccttcgcgtt gccgggcaac ggcgccagtg cagcgcagca gaccagctac
    11581 tggttcgatg cgcagggcgt gcgcgtggcc gtggtcgatg gcacctcggc actcgacctg
    11641 ggtacggcca aggcgcaggc gcagtggctg gacaaggtgc tgaccggcaa tccgcagccg
    11701 tggaccctcg tgctgctgca ccagccgttc tactcgccgc gcgaaggccg cgagaacgcc
    11761 gcgttgcgtg acgtgctgct gccggtggta cgccgccaca acgtcgatct ggtgctgcag
    11821 gggcacgatc acacctacgg ccgccggggt gaaggacacg ctgcgacgcc gcagtacgtg
    11881 gtgaccgtgg ctgggccgaa gcagtaccgc ctttccgacg aagcacgcag gacgatggat
    11941 ccggtggccg aggacaccca gttgttccag gtcctgaacg tcgacccgca gcgcctgcgc
    12001 tatgaagcgc gcacggtgac aggccgtctc tacgatgcct tcgaactgca gcgtgacgcc
    12061 aagggcagca agacgcgaac ggaactgacc gacggccgcg tcacgccgcg cgactgcccc
    12121 cgttcgcaga ccgccaaggg tcgcgccgac cggtgctggg aatgagcgca cgccgatgac
    12181 cactccctct cgcatccttc cccttgctgc catcggtact gccctgctgt tgctggccag
    12241 tgcggtgacc gccgccgatg ccgtgctgca tccgttcctg gtggcccagc cgaagcaggc
    12301 cccgcaggaa gcgaacctgg cggtggagat ccctgccggc agcttcacca agtacgagat
    12361 caaggaagat gggctggtgc atgtggaccg cttccagtcg atgccggtcg cctatccggc
    12421 caactacggc tcgatgccgc gtaccctggc cggtgacaat gacccgttgg atgcgctggt
    12481 gctgacccgc gagccgctgc atccgggggt gatcgtgcgt ttccggccga tcggctacct
    12541 gaagatgatc gatggcggcg agcacgacga gaagatcatc ggcgtgccca ccgacaaggt
    12601 cgacccgacc tacgccaaca tccgcgacct ggccgatctg ccggagatcg aacggcagcg
    12661 catcgaggcc ttcttccggg tctacaagga cctgccggca ggccgcaacc cggtgcagct
    12721 caatggctgg ggcaacgctg ccgaagcacg ggcattgatc agcgaggcga tgcagcgctt
    12781 caaccggtag atccacgcga tgcgtggatg ccccgcccac gcatcacctt caccgtcgct
    12841 ggctatcatg tgcgccttcc atatcgaagg cggtgcatgt gtcggtagcg ttgctatggt
    12901 tccgtcgtga cctgcggctg caggacaatc cggccctgca ggccgcgttg gaggcgggcc
    12961 acgaggtggt gccggtctac atccacgcgc cgcacgagga aggtgagtgg gtgccgggcg
    13021 cggcctccga cgcgtggcgc caccgttcgc tggccgcgct ggatgccgac ctgcgttcgc
    13081 gcggctcgtc gctggtgctg cgctgtggcg acagcctggc gacgctgcag gcgctggtcg
    13141 aacagaccgg cgccgaggcg gtgtactgga accgcaagta cgaaccggct acccagccgc
    13201 gcgacgcgga gatcaagcgc acgctgcgcg agcagggcat cgatgcgcag agctgcaatg
    13261 gcagcctgct gttcgaaccc tgggacatcg cgacccagca aggccaaccg tacaaggtat
    13321 tcactccgta ctggcgcaac gtactcagtc attggcgcct gccggcgctg acggccgcgc
    13381 cgaaggtact gacagcgcac ccggtcgaca gcctcgcgct ggatgagctg cggctttcgc
    13441 cagcgctgga ctgggatgcc ggtttctggg agcactggca gccgggcgag gccggcgcgc
    13501 tggaggcgtt gtcggtgttc gaggacggtg cgttgcgcgg ctatcgcgag cagcgcgacc
    13561 tgccggatcg cgtgggaacg tcgcggatgt cgccccacct gcacttcggc gagatcgcgc
    13621 catggcgcat cgcccatgcg ctggaaggcc tgcgcagcgc cggcaccgac gccgatatcg
    13681 acggctacct gcgacagctg ggctggcggg atttcgccta tcacctgctg cacaacttcc
    13741 cgaagacgcc aaccgacaac ctcaatccgc gcttcgatcg cttcccgtgg gcagatccga
    13801 gcgctgcgca gctgcatgac tggcagcgtg gcgacaccgg cgtgccgatc gtcgacgccg
    13861 gcctgcgcga gctgtggcac accggctaca tgcacaaccg ggtgcggatg atcgtggcca
    13921 gctacctgtg caagcacctg cgtgcgcact ggttgcatgg cgcgcgctgg ttctgggaca
    13981 ccctggtcga cgccgacctg gccaacaaca cgatgggctg gcagtgggtg gccgggaccg
    14041 gcgccgacgc cgcgccgtac ttccgtgtgt tcaatccggt gacccaggcc gagaaattcg
    14101 atccgcaggc gcgctacatc acgcgctggg tgccggaact ggctacgctg ccgctgaagg
    14161 cacgcttcgc gccgtggcag catccgctgc tgctggaggc gcatgcccct ggctatccgc
    14221 gcacgcctct ggtggacctg gcggcgggtc gcgatgccgc tctggttgct taccgccagt
    14281 cgggagcggg gtaaagcgcg ggctgagtga tctggtcaga tagctgaacg cggccctgtc
    14341 ggcgtgctgc atcatcattc cggcatcgca tcgggctgtt tattctcttt gcgcccgcaa
    14401 gccgccggcc gaccggaaac caaggagaac cccatgatcc gcaacaccac ccgcaacgtc
    14461 gcactggccc tgatgagtgc ggccgtcctg tcggcctgcg ccaccggcgg ctcctatgtg
    14521 cagagtgacc agtacggcaa cccgaccgag cagcagaacc gcaccggccg caacgcgctg
    14581 atcggtaccg ccatcggtgt ggctgccggc ctgctgaccg gcgacagcgc caccgagcgc
    14641 cggcagcacg cgctgatcgg cgctggtatc ggcgcactca gtggcgccgc tgtcggccag
    14701 taccaggatc gccaggaacg cgcactgcgc gagcgcaccg ccaacaccgg catcgatgtg
    14761 cagcgccagg gcgacaacat catgctgaac ctgccggacg gcatcacctt cgacttcggc
    14821 aaggcgaccc tgaagccgca gttctatggt tcgctcaatg gcgttgccgg taccctgcgc
    14881 gactacaacc agaccatgat cgaagtggtt ggccacaccg acagcatcgg cagtgacgcg
    14941 gtcaacaacc gcctgtcgaa ggagcgtgcc gactcggttg cgcagtacct gatcggccag
    15001 ggtgtgcaga gcgtgcgcat tgaaacgctg ggcgccggca agtcgtaccc gattgccgac
    15061 aacagcaccg atgccggccg cgccaagaac cgccgcgtcg agatccgcgt gattccgctc
    15121 aagcagtaac gcgcagcgtt actgctgttc cggcgtagcc ggaacgaaaa tgccgccctt
    15181 gcaggcggca ttttccgtag gtgccgagct tgctcggcac gccgatagcg ttcccgttcg
    15241 ctgcgtttgc gtgcagtgcc gaccaaggtc ggcatctacc ggaagtctgc ccgccggaac
    15301 gaaaatgccg ctcttgcagg cggcattttt gtgggtgccg agcgttgctc ggcacaccgc
    15361 atgaccgcgt gctttttcgc ttttgtagag tcgagcgatg ctcgactgcg tgtatggagt
    15421 cgagcatggc tcgactctac agaaggcggt cgagcaagct cgacctctac cagagcggaa
    15481 tgcccggctc acaccgtcgc cgtcggccgc accacgattt cattcacgtc cacgtccgca
    15541 ggctgctcga ttgcaaatct tacggcgcgg ccgatcgcat ccggttgcag ggcgatcgcg
    15601 cggtagccga ccatcatctc ggcggcggcc ggatcggtga tgctgtcggc cagctcgctt
    15661 tccactacgc caggatggat gcaggtcacc cgtagctcgc ggtgctcctg ccgcaggccg
    15721 tcggaaatcg cgcgcaccgc atacttggtc gcgcagtaga ccgctgcggt cggcaccacc
    15781 gacagtgcgc cgaccgaggc gatgttgatg atctggccgc tgcgctgggc gatcatgccg
    15841 ggcagcacgg cagcgatgcc gtacagcacg ccacggatgt tcacgtcgat catccggtcc
    15901 cattcctcca ccttcagcga gcccatcagc gacagtggca tcacgccggc attgttgacg
    15961 atgacgtcga ttgcgcggaa gcgttgccgg gcggcttcgg cgaaggcctc cacctgcgcg
    16021 cgccgggtca cgtccagggc atgcaccagc acctcggccc cctgctggcg cagctcgtcg
    16081 gccagcacct gcagacgatc cacgcggcgt gcacccagta ccaggcgtgc cccgggttgc
    16141 gcgagggaac gggcgatgcc ggcgccgatg ccgctggagg cgccggtgat caggatggtt
    16201 cgggaagggg tcatggcggt gtctctgaag ggtagggagt gccggggtgt gcccggcatt
    16261 gccacggtag acggcggacc ttgtcgcgat aagatggcga ctgctgatca ccttgttcag
    16321 agttgctaac caatggccat cgatctcaac gctctggggg tgttccagcg ggtggctgac
    16381 tgtcgcagct tcaccgccgc cgccgagcaa ctcggcgtga cccgttcggc ggtcagccag
    16441 accatcgcca agctggagca gtcgctgggt gtagccctgg tgctgcgcac gacccgcagc
    16501 gtcagcctca ccgatgccgg gcaggcactg ctggtatcgg tcagccctgc gctggcggaa
    16561 ctgggcgatg cgctggaggc cagcgtgcgc cggcagtccg ccgtgtccgg acaactgcgg
    16621 cttgccgtgt cctccattgc cgaggcgttc ctggccggcc cgatgctggc tggtttcgcc
    16681 gcgcgctatc cggcgttgca gctggacatc accgtgaccg atgaagcgtt cgatatcgtc
    16741 ggcgcgggat tcgatgcagg cgtgcgtctg ggcgaggtca ttgcccagga catggtcgcg
    16801 gtgccggtat cggcgcggca gcgccaattg gtggtgtgct cgccgggcta tcgtgatgcc
    16861 catgcgcttc cggcgcaccc acgggaactg gccagccatc gctgcatcgg ttggcgcagt
    16921 gcgccgggca gggcgcccta tcgctgggag ttcgaagagc ggggccgcga gttcagtgtc
    16981 gatgtgcagc cggaaatcac cagcaacgac atgggggtga tggtcaggct ggccttggcc
    17041 ggcgcaggcc tggccatcgg catggaagac acctggcggc cgtggctgca acgcggcgag
    17101 ctggtctccg tgctggacgc gtattgcccg cggtttgccg gctttttcct gtattacccc
    17161 agtcgtcggc aggccgagcc gaaactacgt gcgctggtcg ggcacgtact gtccgaactg
    17221 tagagtcgag catggctcga ctctacaaaa gcgcggtcga gcatggctcg actctacaaa
    17281 agcgcggtcg agcatggctc gactctgcag agggcatcat gccgccgacg cggcaacctt
    17341 ctccaggatc cgcttgccgc tgctctccag cgcggcgtcc tcctgcgcct tctgctgctg
    17401 tgccagcttc gcgcccgggc actgcgccag catgtagttg gcgtcgaagt tgagcttctc
    17461 gaccaggaag tcgacgaacg cacgcacctt cggcgagacc aggcggccac cggcgaacac
    17521 ggcgttgaag tccacctccg ggccggtcca gccggccagc acgcggcgaa ccatgccgga
    17581 ctcgacgaac ggtttggcca tcacatcgcc agtcagcagc aggccttcgc cgcacaccag
    17641 tgcgccgttc agtgcggaca tgtcattggc cgtcatcagc ggcgtgaccg ggaagtcacg
    17701 cagttcgccg ccgttctcgc ccagctgcca ggtgaagcgc ggcgaattgc cggtgtgata
    17761 cggcttgcgc atcgccagga tgcggtggaa ctgcagctct tcaggatgca gcggctcgcc
    17821 atagcgttcg atgtaagccg ggctggcgaa cacctgcgtg cgcaggctgc cgagtttgcg
    17881 cgcgaccagg ttggagtcgg gcagggcgcc gacgcgcagt gcaagatccg cttcgccggc
    17941 aatcaggtcc agcttctcgt tgcccatgtg catgtccagg cggatctccg gatactgcgc
    18001 atggaactgg cccagcagcg gcgcgatcca ggtgatgccg atcgaatagg gcacggtgaa
    18061 gcgcagccag ccgcgcgggc cggactgcag ctggctcacc gcactctcgg cttcttcaag
    18121 ctcgcgcgcg atgcgctggc aatgttcgtg gtagatcgaa ccggcttctg tcaggccgag
    18181 gcggcgcgtg gtccggtgca gcaggcgcgc gcccaggcgc gtttccagtt cctgcacttt
    18241 gcggctgacc gtggtcttgg gaaggccgag cgatttggca gcggcaatga agctgccttg
    18301 ctcgaccacc ttgacgaaga tcagcgtctc gttgagatcg tgggacatgg tcgggggtcc
    18361 tggacgtcgg ggatgggaca atcgtgacag aacgattgga ccgggaacgg gatgattatt
    18421 ccccttaatc aggactaatc aagtaaaggt ttgaggtcta tcgtggcgcc attcgttatt
    18481 tggagcccgt ccgccatgag cctgcgcaac attcttgccc gtctccggaa tgccggccag
    18541 aacaccctgg acctggcgat gaccgttgaa gcccgtccga gttccttggt gcacaaggat
    18601 ttccgggagt ttaccgcgcc catgcgtcag cagcgtggcg gcgtcatccg cctggccccg
    18661 cacaagggtg accggctgcg tcgaattggg actatcccgg atttgggagg aaatgtcccg
    18721 tgaatgggat gctgacgccc gaagtcctgg tcctcggcgg caccggcgcc gtgggccagg
    18781 gcgtggtcgg tgcattgctg gaagccggta gcccggtgct ggtggtcggt cgcgatccgg
    18841 gccggctggc ggcactgcac gaacagttcg ccgatgagcc gggcctggaa acgctgctgg
    18901 gttcgctcag tgatgacggc tcggcacggg cgctggccga gcgcatcgcg cagcgtccgc
    18961 gtccgttggc agcggtgatc gccgcaatgg gcggtcccta ccgccgtggc cgcgtgaccg
    19021 atcgcaacgg tgacgagctg atgggcgcga tgcaggccga cctgatgccg cacgtgcatg
    19081 cggttcgcca cctgctgccg ctgctgcagg acaacgtgca cgcgcgccgc tacgtgatga
    19141 tcggcagccc ggccaatgcc aagccgtggg cgggttacgg cgagacctcg atcaccaccg
    19201 ccgcgctgcg catgtacgcg caggtggtgc atcaggaagc gcaggcgctg ggcgtgcgtg
    19261 cgcagatgct ggaagtctgc agcccggtct gtaccccggc caacgcggcc aatgcctgca
    19321 tcgagtggcc cagctcgctg ctggtcggcc gtcgcgtggt ctcgctgctc gatggttgcc
    19381 gcgacaaccg cgccatcgtc cgttgcgaca gcagcgatgc cgaactgccg cgcggcctgc
    19441 tgcacctgga agtacccccg ctctggcgcg ataccgcagg cgtcgcttga cctcgaccaa
    19501 ggttgaggtc gcattatgcg ccgccgattt tcgcaacacc ttttcatata gctgtaccac
    19561 ccctccgtac ggatgcatgc catgacttcc cccaatacca ccccacatcg tttcggccat
    19621 cgcatcgcga tggccggcgt gtcgatcctc gccgcggccg tgcttgcagc ctgcagcggc
    19681 ggccatgccg aagaagccgg tgcgccgccg ccgccgcagg tgagcgccgc gccggtgctg
    19741 gtcaagcagg tcagccagtg ggacgagttc agcggccgcg tcgaagcggt gcagagcgtt
    19801 gaactgcgcc cgcgcgtgtc cggctacatc gacaaggtca actatgtcga aggccaggaa
    19861 gtgaagaagg gcgaagtgct cttcaccatc gacgcacgca gttaccaggc cgagtacgat
    19921 cgtgccgccg ccgaactggc ccgcgcccgc acccaggcca cgctggcccg cagcgagtcc
    19981 gagcgtgcca agcggttgtc cgagcagcag gcgatctcca ccgagaccgc cgagcagcgt
    20041 cgcgctgccg ccgaccagtc cggtgcggcc gtgcaggcgg cgcaggctgc gctggacgcg
    20101 gcccgcctca acctggagtt caccaaggtg cgtgccccga tcgacggccg tgccggccgc
    20161 gcgatggtca ccgccggcaa cctggtcacc gccggcgaca gcgccagcgt actgaccacg
    20221 ctggtctcgc tggataccgt gttcgtctac ttcgatgccg acgaaagcac cttcctgcgt
    20281 tacgcacaga tggcacgcaa gggcgagcgc ccgagcgagc gcgacagcga tctgccggtg
    20341 aaggtcggcc tgtccggtga agagggctac ccgcattcgg gcaaggtcga cttcctcgac
    20401 aaccaggtgg cccgcagcac cggcaccatc cgcgtccgtg cgctgctgga caatgccgac
    20461 cgccagttca cgccgggcct gttcgcccgc gtgcagctgc tcggcagcgg ccagttccag
    20521 gccatgctga tcgatgacaa ggccgtgctg accgaccagg accgcaagta cgtctacgtg
    20581 gtcgacaagg atggcaaggc gcagcgccgc gacatccagc tcggccgtac cgccgaaggc
    20641 ctgcgcatcg tcgagcacgg gctggctgcc ggtgacaagg tgatcatcga cggcgtgcag
    20701 aaggtgttta tgccgggcat gccggtgcag gccaaggccg tggcgatgca gccacaggcc
    20761 gcgccggcac cgggccgcga cgccaccgcc gcactgaacc actgatccgc cgtctcctga
    20821 ttcgcgtttc cgcttagctg ccggcgccag cggcagcctt ccctgccttc gtcatatcgg
    20881 cgaggggcag ggcggctgtt gcccgccgac ggcatttccc aggaattcct ccatggactt
    20941 ttcccgtttc ttcatcgaca ggccgatctt cgcggcggtg ctgtcgatcg tgatcttcgc
    21001 cgcaggcctg atcacgattc ccatcctgcc gatcagcgag taccccgaag tggtgccgcc
    21061 gtcggtggtg gtgcgcacgg tgtatccggg cgccaacccc aaggtcattg ccgagaccgt
    21121 cgccacgccg cttgaagagg cgatcaacgg cgtcgaaggc atgatgtacc tgaagtcggt
    21181 cgccggctcc gatggcgtgc tgcagatgac cgtcaccttc cgcccgggca ccgacccgga
    21241 cgcggcggcg gtgaaggtgc agaaccgcgt ggcgcaggcg caggcgcgcc tgcccgagga
    21301 cgtgcgccgg cagggcgtga ccacgcagaa gcagtcgccg accttcctga tggtggtgca
    21361 cctgacctcg ccgcaaggca agtacgacac cctgtacctg cgcaactacg cacgcctgca
    21421 cgtcaaggat gcgctggcgc gtattccggg cgtgggtgac gcgcagatct tcggtggcgg
    21481 cgattacgcc atgcgcgcct ggctggaccc ggacaaggtg gcttcgcgcg gcctgaccgc
    21541 cagcgacgtg gtgcgcgcca tgcgcgagca gaacgtgcag gtctcggccg gccagctcgg
    21601 cgccgaaccg ctgccgaaca gccagttcct gaccctgatc aacgcccagg gccggctgaa
    21661 gaccgaaaag gaattcggcg acatcgtgct caagagcggc gtcgatggcg agatcgtgcg
    21721 cctggccgac gtggcccgcc tggaactggg tgccggcgac tacacgctgc gctcgcagct
    21781 ggacggcaag aacgcggtcg gtatcggtat cttccagtcg ccgggtgcca atgcactgga
    21841 gatccgtgac caggtcatct cgacgatgga cgagatgcag aagaccatgc cggccgacgt
    21901 gaagtacgaa gcggtgtacg acaccaccat tttcgtgcgc gactcgatca aggccgtggt
    21961 ttccacgctg ctggaagcca tcgcgctggt ggtgctggtg gtgatcctgt tcctgcagac
    22021 ctggcgtgcc tcgatcatcc cgttgatcgc ggtgccggtg tcggtggtcg gtaccttcgc
    22081 tgcgctgtac ctgctgggct tctcgatcaa cacgctgagc ctgttcgggc tggtgctggc
    22141 gatcggcatc gtggtcgacg acgcgatcgt ggtggtggag aacgtcgagc gcaacatcga
    22201 agaaggcctg tcgcccactg cggcggccca ccaggccatg cgtgaagtgt ccggcccgat
    22261 cgtggccatc gcgctggtgc tgtgtgccgt gttcgtgccg atggccttcc tgtccggtgt
    22321 caccggccag ttctacaagc agttcgcggt caccatcgcc atctccacgg tgatctcggc
    22381 gatcaactcg ctgaccctgt cgccggcgct ggccgcgcgc cttctgaagg cccacggcgc
    22441 gccgaaggac ggcccgagcc gcctgatcga ccgcctgttc ggctgggtgt tccgtccgtt
    22501 caaccgcttc ttcaagtcca gctcggagaa gtacgagcgt ggcgtggccc gcatcctcgg
    22561 ccgtcgtggc gcggtgttcg tggtctacgc gatcctgctg gtcggtaccg gcgtgatctt
    22621 caagctggta ccgccgggct tcatcccgac ccaggacaag ctgtacctga tcgccggtgt
    22681 gaagctgccg gaaggctcgt cgatcgcgcg caccgatgaa atgctgcgca aggtcgccaa
    22741 gatcgcccag gaaaccgacg gcgtggccca caccatttcg ttcccgggcc tgaacgcgct
    22801 gcagttcacc aacacgccga acaccggtgt ggcgttcatt ccgctgaagc cgttcgccga
    22861 gcgtcatggc cgtaccgctg cgcagatcaa tgccgagatc aaccagaaga tcgccggcct
    22921 gcaggaaggc ttcgcgttcg cgatgatgcc gccgccgatc ctcggcctgg gcaacggcaa
    22981 cggctaccag atgttcatcg aggaccgcgg caacctgggt tacggtgcac tgcagaatgc
    23041 cgtgcaggca atgcagggca ccgttgcgca gaccccgggc atggccttcc cgatttccag
    23101 ctaccaggcc aacgtgccgc agctggatgc ggaagtggac cgcgtcaagg ccaaggcgca
    23161 gggcgtgcag ctcaccgagc tgttcgacac cctgcagacc tacctgggtt cggcctatgt
    23221 caacgacttc aaccagttcg gccgtacctg gcaggtgatc gcgcaggccg acggtccgtt
    23281 ccgcgagacg gtcgaggaca tcggcaagct gcgtacccgc aatgaccgcg gcgagatggt
    23341 gccgatcggt tcgatggtca ccatcaagca gaccttcggc ccggacccgg tgctgcgctt
    23401 caatggctat ccggcagcgg acctggccgg tgaagccgac ccgcgcctgc tgtcgtcggc
    23461 cgaggcgatg aacaagctga ccgagattgc cggcaaggta ctgccggtgg gcatgaccac
    23521 cgaatggacc gacctgagct accagcaggc gacccagggc aaggcggcgt tcatcgtgtt
    23581 cccggtggcg atcatgctgg ccttcctggt gctggccgcg ctgtacgaga gctggtcgct
    23641 gccgctggcg gtgatcctga tcgtgccgat gaccctgctg tcggcgctgt tcggcgtgtg
    23701 gctgaccggc ggtgacaaca acgtgttcgt gcaggtcggc ctggtggtgt tgatgggcct
    23761 ggcgtgcaag aacgcgatcc tgatcgtcga attcgccaga gagctggaga tgggcggcaa
    23821 gggcatcgtc gaagccgcgc tggaagcctg ccgcctgcgt ctgcgcccga tcgtgatgac
    23881 ctccatcgcg ttcatcgccg gcaccgtgcc gctggtgctg tcgcacggtg caggcgccga
    23941 agtgcgctcg gtgaccggta tcaccgtgtt cgccggcatg ctgggcgtga ccctgttcgg
    24001 cctgttcctc accccggtgt tctacgtcgc cctgcgcaag ttcgtcaccc gcaacggcgg
    24061 tggccagctg gtgcagcacg gcgagccgac catccatcac tgacatggaa ccccgtcgcc
    24121 gccggtcagt ggccggcggc ggctttctcc tcacaaggca tgaatccatg aactcccatc
    24181 agaacaagat cgcgctggtc accggcgcta cccgcggcat cggtgccgag accgtgcgcc
    24241 agctggcgca ggccggcgtg cacacgctgc tggccggccg caagcgcgag accgccgtgg
    24301 agcaggcact gaagctgcag gccgagggcc tgccggtgga agcgatccag ctggacgtga
    24361 ccgatgctgc cagcatcgcc gaggcggtcg agcaggtgcg ccagcgccat ggccggctcg
    24421 atatcctggt caacaacgcc ggcatcatga tcgagaaccc ggcgcaggct ccctcggaac
    24481 agtcgctcga tacctggaag cgcaccttcg ataccaatgt gtatgcgctg gtggccgtga
    24541 cccaggcgtt cctgccgctg gtcaagcagg ccaagtccgg tcgcatcgtc aacgtgtcca
    24601 gcatgctcgg ctcgcagacc ctgcacgccg acccggcgtc gggcatctac gacttcaaga
    24661 ttcccgccta caacgcctcc aaggcggcag tgaacagctg gacgctgagc ctggcctacg
    24721 aactgcgcaa caccccgatc aaggtcaaca ccgtgcatcc gggttacgtg aagaccgaca
    24781 tgaacggtgg caacggcgag atcgaaatca gcgaaggcgc acgttccagc gtggaaatgg
    24841 cgctgatcgg cgaatccggt gccagcggca gcttcaccta cctgggcgag gtgctgccat
    24901 ggtgatccgc acgttggcga tggccgtctc cagcctggtg ctggcgggct gtgtcagcgt
    24961 cggcccgaac tacaaggcgc cggtgcagga accggtcgtc ctgcagggcg cacagcagcc
    25021 ggtgttcacc agcacgtcgc cggtggccag ttggtgggcg cagttcgatg atccggtgct
    25081 ggaagaactg gtgcatggcg cactgtcgga caacctcgac ctgcgcgtgg ccgtggcccg
    25141 cgtcagccag gcccgcgcgg tgttcgtcga aagccgtttc gaccaggccc cgcacatcac
    25201 cgcaggcggc agctacgacc gccgcaagca acccgatccg cagctgggtg ggcagcgggt
    25261 gttcagtgaa agctaccagc tcggcttcga cgccggctgg gagctggatc tgttcggccg
    25321 caagcgccgc gctgcagaag ccgcgcgtgc cgacctcgat gccgagcagg ccaacctggc
    25381 cgacgcgcag gtgctgatcg ccgccgaggt agcacgcaac tacttcgagc tgcgcggtac
    25441 gcagaaacgc atcgcggtgg cccagcacac cctggtcaat ctgcgcgaca cgcagaagtt
    25501 gaccgaggcc cgctgggagc tgggtgccgg cagcgaactg gacgtgcaga gcagccgtgc
    25561 ccgcctgaag gcgatcgagg ccgacattcc gctgctggaa gtggccgaga cgcagtcgcg
    25621 caaccgcttg gcggtactgc tggggcagcg cccggaagtg ctcaccgcga tgctcgcacc
    25681 gcatgaggtg ccggcgttcg ccaaggccct gccgctgggc gatacccgcg agctgctgcg
    25741 ccaacgcgca gacgtgcggg tggccgaacg tcgactggcg gcggcgaccg cacgcgtcgg
    25801 cgtggccacc gccgatctgt tcccgcggct gtcgctgtcc ggtttcgtcg gcttcctcgg
    25861 tggcgatgcc agcggcctgg tcaacggcaa caacaaggcc tggtcgttga ccccgtcgct
    25921 gagctgggcg gccttcgatt tcggcaccgt gcgtgcacgc ctgcgtgcca gcaaggccga
    25981 ggccgaaggt gtggccgcgc agtatgagca ggcggtgctg ctggcgctgg aagacaccga
    26041 gaacgcgctg acccgctact ccaagcagca ggcgcggctg gcgatcgtgg tcgagcaggc
    26101 gcaggcggca cgacgtgccg aatcgctggc acagatccgc tatcgcgagg gctcggagga
    26161 cttcctgacc ctgctggacg cgcagcgcac gcagctggcc gccgacgatg cattggccgc
    26221 ggccgaggca gaagtgaatg tcagcgtggt aggtgtgtac aaggcactgg gcggctgggg
    26281 acagtcgccg cagccgccca gcgtggcgca gctgcagtaa ccccgagggg acggaggcgg
    26341 tagcgtccgt ccccttcttg tttcagggcc gttgatcggc cccccgccat cgtgccgcct
    26401 tctccggcag ccagcgcctg gcagtggatg atgaatccgc agttcggcaa ccggggcagg
    26461 gaagcaccgt gcaggctgtg cacgttgtca cagtcatgac gtttctgact ctgccggaag
    26521 ccgtgtccgc cgtgtaacta gtgggacagg ctcttgggag gacaggtgat gaccgatggc
    26581 aaacacgata cccagcgcag gctgttcgga gatccggggc cacccggcgc ggggctttcg
    26641 gtggcggtgg tggtactgat ggtgctcgcg tcgatggcgg ctgcgatcgg gttcatacgg
    26701 ctgccggatc cgctgctcgg cctggggctg atcggcgtgt ccgtgtttct ggccgtcggt
    26761 gcccgcatct gccaggcacg cgaccagcat caggcactgt accgcctgct gtcacggcag
    26821 ccgccgccgt agccgcggct gccgtgcagg ttcagcgctt cggccagtcc agctcgacca
    26881 ccagcgggaa atgatccgat ggcagcacgc cgtcgatgcg gcggtcgtcg gtaaggaagc
    26941 tgcgcgcatg gaagccgcgc accagcaccc agtccagctg tgcggtggcg ttgccggtga
    27001 aatcatggaa ggtcaggcgc gggccctgcg gtgccttcac ctgggggcgg gtgtcctcca
    27061 gcacgtgggt gaacgctttg taggtatcgc cgccgggttc gctgttgaag tcgccggtca
    27121 gcaccaccgg caggtcggcc ggcagggtgg tcagacactt gccgatcagc tcggcaccct
    27181 tcacccggcg cggttcgtcc tcgtcgcggt agggcaggtg ggtatccatg aagtagaagc
    27241 gacgaccatc ctccagacgc cggaacagcg cccaggtgac catgcgcgga tacaggttgc
    27301 cccaggtgat gctgccgggc acgtccggcg tatcggacaa ccagaagttg ccggacgcct
    27361 cgatggccag caccttgctg tcgtagaaca cgcccatgtg ctcgtcgccg ctgccacccc
    27421 ggcggccttc gccgaaccag cggtagccgg gcaggtgctc ggacaggtaa tcggcctgtt
    27481 ccttcaccag ttcctgggtg ccgatcaccg ccggatgcgc atcgaggatg accttgacca
    27541 tcgcatcgcg acggtccggc cagcgcttgc caggctcggt atcggccggg gtgcggacat
    27601 tgaacgacat cactttcagc ggcgcaggcg tggccgcgca ggcgaaggca ggcagagcaa
    27661 gtgccagcag cgcgcacagc gcccggcgat ggaaacgcgg caacatcgtg gaatccctcc
    27721 attccatgaa aacggtttca cggagcatgc catggaaggc gagggcagcg gtatgccggg
    27781 atgggcggct ggcaggtgcc gggcgggcgg tgaacgcgtc gcccggcgga tcgcgtgagc
    27841 gcgatcagga gatcacgggt gctcagtcgg cgggcaggta ccactggcca ttctggtcaa
    27901 tccagtacac ccggatgtag ggagtgccgt cctcttcgaa gtacgtcact tcgcaacgct
    27961 gatggtagta gggccccatc ttgacccgga cgcagttcgt gttctccgga ccaccgccac
    28021 caccgctggc ggcggcctgg gacggcgagg agagagctcc aacggcaagc atcagtgcgg
    28081 ccatcgaggc caggtgcaat ttcatggtca tcatccttgt gtctgcaatc gcgcatctgc
    28141 gcgttgtcgt gcaacgtccc gcggcacgcc aggctgacgt gcgggagttg ctgcatgcgc
    28201 gccggcccat gggcgacccg gcgcatttcc ccggctcagt cgcgcaggta ggggttgccg
    28261 tactcgtcga tccaatattc ggccgtgtag acgttgccga attcatcggt gtaggtttcc
    28321 gtgcagtggt ggtggacgcg gttgcggtcc acattcaccg gcacacagga aacattttct
    28381 ctcgggaccc ctgtgttggc gtccgccacc ggtgccaggg ttgcagtggc taccaccaac
    28441 gcggccattg cggccagttg cagtttcata agcatcatcc ttgcttctgc aatcgcgcac
    28501 atgcgcacgg ggtgtgtatc acgcgaaccc gaccatcgga agtgcctcgc tgcgatcagt
    28561 cctcgatctc accgcgacga gttgcagcgc gtaccgcctg cgcggtagtc gcaacaccga
    28621 ggcgctggcg tgcatggcgc aggtggtttt ccacggtgcg tgcggaaagc ccgagcgtgg
    28681 cggcaatttc cgcctggcga cgcccggcag cgacccagcg cagcacctcg cgctcgcgcg
    28741 tgctcagccg gcttccggaa agcgctgcgg gaacttcagc cagacggcgt gcggcgcgga
    28801 atgctgcggt tgcagcagac tccagctgca ggcgtgcgct ggcggatgca tcgatggagg
    28861 tgcctgcgaa actgatcgca ccctccagcc cggtggtacc gaataccggc acctgcaggc
    28921 catgcaggcc ttcgccacgc ggttgcttca ccacctggta gcgctcaccg cgcagccctt
    28981 ggcgtttgct ccagaagaac ggcgcgtcgc tgtccagcac atggcgattg accgggcagg
    29041 catgcagata gcgggcgagg tcggcatcgc cgctctcgcc gagccagtcg ccgttgatcc
    29101 agtacacgcg ctgcgtgccg cgctccagtc cggtgccggt ggcgaacacc agcacgcggt
    29161 cgtagccgag tggtgcggcg atgctgtgca gtaccgcgcc caccgcgtcc agcgagcggg
    29221 cgcgttccag cttcagcaac gcctgcacca gcgcggtcat ccggatcagc gcccggccag
    29281 tgcgtcgagc agggtgcgtg cagccagctt gccgagcgca ttgcccgcca gcgggctgtc
    29341 gccggtcagc agcaggcgat cctgcagcac gctgccatcg atgccctcgt tgacgatctg
    29401 cacaccctgc tgcgccagcc gctcaccgaa gaaccactgc agctggcccg gcatgtagcc
    29461 gatctccggt gtctgccggt ccattgcatc ggggaaggcg cagatgcggt agccgcggaa
    29521 cagcgagccg ccatcggctt cgtcgacgcc tgcggccagc aatgccgcag ggccgtggca
    29581 gagggtgatg atgtggcgtt gctcggccat cgcccaatgc agcaccgcct tcaccgcgcg
    29641 gctctgcggc agcccgatca gcgcgccatg gccgccggga atgaacactg ccgcatagtc
    29701 cgatcctgct cccagtgcgg ccacgacatc gtccagcgcc agcggctggc ggaagcgttc
    29761 ttcatagcgt tcgtacagcc cgccgatctg cttgtcctcg cgcgggaagg cccaccactc
    29821 gaacttggtg gcgttgcccg acagcgtggc cacgtcgatg tcgaaacctg cctggtccag
    29881 gtgatacatc ggcagcaggg tttccaccgg atggttgccg gtggagaaca gatggccgtt
    29941 ggcggtaggc aggtagcgct cgtcggcggc gatcatcagc accttccagc gaccatcgcg
    30001 gcgtgcgtcc ggatagtcgg caccggacag gttgctcttc ggcgacgtga actgcgacag
    30061 cgagtacggc gaggggaaga aggcatcgcg ctcggccgga tcggggctgg gctggcgact
    30121 gggctcttgc gtgttcatgc ggacctcctg cggggaacgt aaggccagca tagaagcgtg
    30181 gatgcgcacg cgcgatgagg gatttccctc aatcgcccga ggctatctgg ctgctgcccc
    30241 gtgctgctgc atgtcctcgt gcaggatccg ccgcagctcg atgatcgcgg gcgtggcttc
    30301 ctgcacgctg tgcccggaca cgatcacctt ctccgacacg gcgttgggca ggtgcgagct
    30361 ccaatacggc accagcccgt catcggtctt ttccaacggc ccgtcggcct tggcgcgggc
    30421 gatgatcgag tggtactgca ccttgggcgc catcggcagg tcagccacgg cgcggacgaa
    30481 cgcgtcgtcc ttgtccaggt tctggatgct gttcatctgg tagccgtgct tgccatcgtt
    30541 gcggtcgatc tggccatcgt tggcgatggt ggcgacatcc tccagcacgg tcagcggcag
    30601 ccgcaccagg cgaccgatcc agcggcccag acgggtgccg gcgacgtcgg tgccacggtg
    30661 cggcgtggcg atgaacacca cccgtgatac ttccggctcc ggcaggaagg tcagtaccgg
    30721 cgccccgcgg gtgcgcagca gttcgcgctg cgccggcgtc atctgcgcag tggccagcag
    30781 ggtatcgacc aggtggtcgc cggacgacga gaccataagc cgcgcgatca ccccgcccat
    30841 gctgtgcccg accagcacca tgtcatgcga ggcctgcgcc tttccgctgg ggtcgaagtg
    30901 cctgaacacg tcggccagcg tgtggcgcat cgcatcgtgg ctcatcgcga tgggcatgtt
    30961 ggtcgggtag tagaactgcc agatctggaa atcctggcgg atctcgtcgt cgcgcatcag
    31021 ctcgttggca acgttgaccc aggcttccgg gctgctggcc aggccatgga tcatcagcag
    31081 cacgcgccgg ttcggatcat agggctgcat catgtacagg tgcggcgtgt cgatgccgcc
    31141 cttgccgccg aacagcgagc gcagcgactg gtggctgaag ttggatctcg ccagccacag
    31201 cgcgtagccg gcggtgaagt tcgccgccag cggtacctcc tgcccgtgca gggtgacttc
    31261 ggtgacctgg tagggatcgt ggatctccag ttccggctcg tcgtcgtgca gcacttccca
    31321 tagattcttt ccggagaagc gcagcagcac cgtcatcgac ggcgaaggca tctcgctcca
    31381 gctctgcgtg gtcgcagggg cggtgtgcgt ggggggtgcc gtggtggcgg tggtgcctgc
    31441 cggatcatcc atcaccgcca ccagctcggc gccgaagccg tcgcggcggt gcacgctgcg
    31501 cagcgtgccg gtgaatgaca gcgaagcggc cggcaccagc tcggtcggcg tgcgcgtgtt
    31561 cagcggcgac gcctcggtgg aaggcgccag cacgaaggtc cagcggccca gctggaaatg
    31621 actggcctca ctgtgcacgc ggccggtcgc gtaggcgttg tacagctgca ccgaggcttc
    31681 ctgcacagcc aggttgtagt agtcgcgcac ctgcgtctgg cggtcttcga agccgcgctg
    31741 gttggcggtg cgttcggtga agaacagata ggcataggcc tggcgtgcga cctgcatcca
    31801 cgcgtccagg cgcggctgga agtcggcgtc cagttcggtg atcgcggtct tggcgcggcc
    31861 tgacgcggag tactcgcgct tgggggcggg cagggtcatc gcgtactgca gccacagctc
    31921 ggccaggctc gaacgcttgt cttcctcgcg caccacgatg ctgccttcca tcgcctcgat
    31981 gcagggcagg ccgggcttgg cacagacgcc ttcatcaagg ccggccacgc gcagggtctc
    32041 ggtggtcgct gcgctgagct tgccggaggt caggatgtcg ccgcgcttga gggcgatgta
    32101 ctgccccggc gtgaccgagg cgacctgtac cgacggcccg aactggcgca gcgtcgcgca
    32161 accgcccagg gtgagcagca cggtgatgat gagggtcgtg cggccgatga agcccaagcc
    32221 cgtggtagcc atacgatcct cctgcgcggt ggcgccactc tagcgtccgg cctgtcaaag
    32281 cggaagatac cgggcggtcg gtttgtgcct tgaaaccgcc gccatgcaag cgattcaggc
    32341 attcgcgtgt gacactaggg tgaatggagg catgcaagga cggcgatgcg ttggcttgag
    32401 acacggattc caccaccgct ggtgatgctg ctgtgcggtg gcatcggcta cctggccagc
    32461 cgcctggcag cgggcctggc ggtgccgctg ccgatgcccg cgctgcttgc aggtgctctg
    32521 gtgacgctcg gtgtgacgct gaacctgctg ccgaagctgg ccttccgctg tgcgcgcacc
    32581 acggtcaatc cgctgcgccc gtcggcctcg agcgcgctgg tcacgcacgg ggtataccgc
    32641 tacacacgca atccgatgta tctcggtcag gcgatcgttc tgactggtgc cgtgctgtac
    32701 ctgcagaacc cggtcgcgtg gctggccgtg ccgctgttcg tgctgtacat cacccggttg
    32761 cagatcgtgc cggaagagcg ggtgctgtcg gctcgttttc ccgaagcgta tgcgctgttc
    32821 cgccaacgcg tacggcgttg gctgtagcgc gggccgggtg gtcacgcggc acactgcctg
    32881 cacgaaaaac aggcacaaaa aagccggaac cccgttgatg gaagttccgg cttcttgtgg
    32941 cctcgacagg ccatacagat ggtggaggtg ggcggaattg aaccgccgtc cgaaggcact
    33001 ccatccccag cactacatgc ttagctcgcc gttaaatctc gtccccgaac agcacggcgt
    33061 gcaaagcgca tccgggaacc agcctgttgt gttctagtgc cggactgaca ggcagccgcc
    33121 cagcgcgatt ccatgataat gactctacgc tgcgagcatg gacacaagca gtttcgaggc
    33181 tccgcctaag tcggcagaag gtcacgcacc gcagttttta ggctgcgaga gcgaccggag
    33241 cgtagttgtc gtcgttggca actagagttt tgcagctgga tttacgagga aagctacccc
    33301 ctcggcatgc gccaggcgac ttcacaaccc ccgtcgaaac caatgcaccc ccggtttcta
    33361 cagtgctgca aggtacaggg ccaattccgt gtcgccacgg tcagggcctg cccaacgttg
    33421 gcaatgctac ggcaaaacag ctgaacagtc accttggcaa tcctcaggaa gttgtagtgc
    33481 ggctggcata gcggattggt aacttcattg gcacgaattt gcgacacact ggcgacgacc
    33541 atccaggcta gagcagacac ggagacggtg ggtgactgag gcaagccaac aacgcagcct
    33601 gcgacagctg gtcggaccgg tcggtgccga ttatcagcgg cgcgcgctgc cccccggctg
    33661 ggtctgggcg ctgctggggc tgctgctcgc agccacctgg ctgaccgagc tgccggcaac
    33721 ggcggcggcg gcgctggtgg ccagcgcggt ggtggtgcac tgggcgcagc gcggtcgcat
    33781 ccattggttg gggtggcggc tgccgggcct ggcggtgctg gcggccctgc tgtgggggcc
    33841 ggaggtgttg tcgcagtggt tcgagcacgg cctggccgtg gtgctgatgt cgctggccag
    33901 tttgagcatc ggcatgcatg tgtggcagtc gaggcaggtc gccaggcagc tgcaggtcgc
    33961 ggccgacgcg ctggacgatg cgcagttgct ggcgctgctg ccacccgatg cggcgcagct
    34021 ggcacagcgg tggcgcgcgg gcgatgagcg ccacgcgccg gaactggcgg tggtgatgca
    34081 cctggcggtg atgcacgcgg cgctggtacc gcggatgcgg aagctgggcg cgctggccgg
    34141 ttgagccgct tgtagagtcg agcctgctcg actgattctt gtccaagccg agcatggccc
    34201 ggctctacag aaggccaaag cagtcgagca agctcgactc tacaggggca tgcgcaaccg
    34261 cttacgcgtc gcggttgccg cgacgcatca cgcgctgctt ctcgatcgcc cagtcgcggt
    34321 ccttggcggc atcgcgcttg tcgtgggtct gcttgccctt ggccagcgcg acttcgagct
    34381 tgatcttgtt cttgctccag tacatcgcgg tgggcacgat cgtgtagcca tcgcgctcga
    34441 ccttgccaac cagcttgtcg atctcgctcc ggtgcagcag cagcttgcgc tcgcgccggt
    34501 cgttggccac cacatgggtc gaggcctgga tcaacggggt gatctgcgcg ccgatcagga
    34561 agatctctcc atccttgacg taggcgtagg cgtcgacgat gttgccgcgg ccggcacgga
    34621 tcgatttcac ttcccagccc tgcagggcca ggccggcttc gaagcgatcc tcgatgtggt
    34681 actcgtggcg ggcacgcttg ttcagcgcga tggtcttgtt ggccgtcgcg ctctttgctt
    34741 tatccttgcc gctgttcttg ctcatttccg tattgtctcc gattcgggcc cgcccggtcg
    34801 attgccgaaa cgtcctgtat tcatgcctac tatccgccgc agcgccctgg tcgaacattc
    34861 ggccgcgcgc atgttcgacc tggtcaacga tgtccaggcc tatccgcgcc gtttccgctg
    34921 gtgctcggct gcccagatcc tggagcaggg cgaagaccgg ctggtggcgc gcctggacct
    34981 gggcctgggc tcgttcagca cctggttcca gaccgaaaac accctgcagc gcccgcacag
    35041 catcgacatg cagctgcgcg atggcccgtt caagcaactg cacggccgct gggaattcca
    35101 tgcgctggcc gaagatgcct gcaaggtcac cctgaccctg gagttcgagc ccagttcgcg
    35161 cctgctgggc ccggccctgg cgatcggctt ccaggggctg gccgatcgga tggtcaacga
    35221 tttcgtccgc gtcgccgacg agggctgagc gatgatcgag gtcgaggtgg tgctggcctg
    35281 gccgcagcgg gtgctgtcgc gccggctgca gctggaagag ggcgcgaccg tggccgatgc
    35341 gattgccgcc gccgcgctgg acggcactgc cggatgcccg gcagtggcgg tgcatggcgt
    35401 gctggcgcgc ccgcagcagg tgttgcagga aggcgaccgc atcgagctgc tacgcccgtt
    35461 gctggccgac cccaaggaca accgccggcg gcgcgcgctc ggcggttgat gcccgcgacc
    35521 cgtccgagtg gacgggcagg gcgcctcagc ggcccttctt cttcttgtcc ttcggcaggt
    35581 tgcggccgaa ctggcgcacg gtctgctggg ccagggcctt gtcgttgccc gggaagtagt
    35641 cgccttccca gcgggtcacg gtgtcgttgt cgaagaacac gacgaaattc ttcacctcgg
    35701 tacggcccag gcggttcacg cgctggctgg aggtgtagtc ccagcgctgg gcgtggaacg
    35761 ggtcggggat ggacggggtg cccagcagcg cggtgacctg ctgcttgctc tgcccgacct
    35821 gcagcttggc cacggcatct tcccggatca ggttgccctg atagatgggt tgcttgtaga
    35881 tgatgccgca cccggtggtg gacagggcga cggcggcgac caacaggaga ttgcgcatcg
    35941 ggactggcgg ttggggaaat caaaccgatg atacactccc ggcgtgccac cgcgacccaa
    36001 tccgaggcag ctggcgctaa atcgccaatg aacggagacc tatggaaacc cacgacctgc
    36061 gtaaagtcgg cctgaaggtg acccatccgc ggatgcggat cctggcgctg ctcgagcagc
    36121 gcaatgccca gcaccacatg accgccgaag atatctaccg ccagctgctg gagcatggcg
    36181 acgagatcgg cctggccacg gtctaccggg tgctgaccca gttcgaggct gccggcctcg
    36241 tgctcaagca caatttcgaa ggcggccagg ccgtctacga gctggaccgc ggcggccacc
    36301 acgaccacat ggtcgacgtg gacagcggca agatcatcga gtttgaaagc cacgagatcg
    36361 aagagctgca gcgcaagatc gcggccgatc acggctacga gctggaagag cactcgctgg
    36421 tgctgtacgt gcgcaagaag cgcaagtaag ccgttccggc cagccggacg cgacagaacc
    36481 ccgggcttgc ccggggtttt tcgttgttca cagtagatcc acgccatgcg cggatggccc
    36541 catcaacacc tccagatcca ccgcctcggc catcgcctgg ttgccggcat cgcccggatg
    36601 caggtggtca ccggagtcgt aggcggcggc catccgtgac ggatcggccg ggtcgcgcag
    36661 ggccgcgtcc agatcgatga ccgcgtcgaa cgggctgcgt gtgcgcagcc aggtgttgag
    36721 ctgttggcgc agcgcctcct tgccgggctg gtagtagtcg tccagcggcg tgccgggcag
    36781 ggcgccggcg aagggcggca gggtggcgcc caggatgcgc agtccgcgcc gatgggcctg
    36841 ttcggccagc gcccgatagc cgtcctgcag ctcggccagc gtaggacgcg cctgctgccg
    36901 ggcgaaggcg gtgccgggcc agctgatgtc gttgatgccg atcagcacga tcacgctggc
    36961 cacgctgggc tgatccaatg catcgcgctg caggcgggcc agaaccgact cgcccatgcc
    37021 gtcacgcagc agccggccgc cggagatgcc agcgttgacc accgcgacgc ctcggggtgc
    37081 cagccgcgcg gccagatggt cggtccagcg ctggtcctgg tcgaggctgg cggtggcgcc
    37141 gtcagtgatc gagtcgccga tcaccaccac gctgcgtgcg ccgggtgcgg cctccacttc
    37201 aatcccggtc aggaacaggc gtgcggtggt gggggtggct cgatccaggt cgcgcgccag
    37261 gctctggttg ccgccggcga tccaactggt ctggcggccg tcccagtgga aggtctgcag
    37321 cggcgtcggc cccggcacga aaacgctgac ctgcagggcc tgctgattgc cggtgggcag
    37381 tgccagcgga tcgctcagcc gttcctggcc cgcgccgatc agcacgccgg gctggccgtc
    37441 gaagtggagc ggccgtggtg ccgcgcccgg tcgtgcggcc acgctggccg ctcctatccg
    37501 cagcggctgc gtgccgtagg cattgctcaa ccttacccgc aggcgcggcc cgcccaggct
    37561 gatgcgcgcg gcctggcgga aggtctggtc gtgcagcgat gccgggatca gggccgggaa
    37621 caggaagtct gcgccccaca ccggttgcgg gctggcctgc cagctggcca cccagtgcgg
    37681 ggcaggggtt gcgctggcgg cgccggacag ggcgagcagg gtgctggcag cgagcttgcg
    37741 gaggcggtcc atggagcgat tccggggaaa ggagccgcca tggtgattcc gccctcatct
    37801 gtgaactaga ctgcgcatgg acaatcatct gtgaactgga ttcatcgcca tggcgcgacc
    37861 cgacatcaac cgatccggcg aactggaagt cttcgtgcgg gtgatcgaga ccggtggctt
    37921 ttccgcggcc gcccgcaccc tggacatgac cccgtcggcg gtcagcaagc tggtggcgcg
    37981 gctggaacag cggctgggca cccgcctgct gcagcggtcc acccgccagc tgcagctgac
    38041 cccggaaggc tgcgcgttct acgagcgcgg cctgcgcgtg ctggccgacc tggaggaagc
    38101 cgaacgctgt gccagcgccc acgccgagcc gcgcgggcgg ctgcgggtca attccaacgt
    38161 gccgttcggc cagcacttcc tgttgccgct gctgccggcg ttcctcgagc gcaacccgca
    38221 ggtgggggtg gacgtgaccc tcaatgacga agtgatcgac ctgcttgagc agcgcaccga
    38281 cgtggcggtg cgcgccggcc cgctgaagag ttccagcctg gtggcgcggc gattgggcgc
    38341 gacgcggatg atgatcgtgg ccgcaccggc ctacgcgcag cggcacggcc tgccggccag
    38401 cgtcgaggag ctgcaggcgc acaaccgcct ggacatcggc catgcgcggg cgatgcaggg
    38461 ctggccgctg ctgcaggacg gtcgtgagcg catgctgctg cccagcggca acgcccgtgc
    38521 cagcaatggc gatgcgctgc gccaactggt gctgggcggg ctgggcatgg cgcggctggc
    38581 cgcgttccag gtgcaggccg acatcgccgc cgggcggctg ctgccggtgc tggaagaggc
    38641 caatcccggt gacctggagg aggtgcacgc ggtgttcctg gggcagggcg gctacctgcc
    38701 gctgcgggtg cgcgcgttcc tcgatttcct ggtggaaaac gtcgatctga cgcagccacg
    38761 ggggtgaaac ggcgattgta gagtcgagcc atgctcgact gcctttggcc ggatgccaga
    38821 agcagtcgag catggctcga ctctacaaaa acggtgcgtt gtagatccac gccatgcgtg
    38881 gatgaacgcg tacgcgcgtc agacctgcag cagcttgcgg gcggcggcgc gcgcttcctt
    38941 gctcacttcc acgccgccga gcatgcgcgc cagttcttcc tcgcgtgcct tgctgtccag
    39001 cttctccacc gcactctggg tcatgccttc caccggcgcc ttgctcaccc ggtaatgcgc
    39061 gtggcccttg gaggcgacct gcggcaggtg ggtcacgcac aacacctggc gcttctcgcc
    39121 cagcgcgcgc agcttctggc cgacgatgtc ggccaccgcg ccgccgatgc cggagtcgac
    39181 ttcgtcgaat accatggtcg gcaccgcatc caggtccagc gccgccactt cgatggccag
    39241 cgagatgcgc gacagttcac cgcccgaggc gaccttgcgc agggcgcgcg gcggctggcc
    39301 ggcgttggcc gcgaccagga actccacgcg ctcggcaccc tgcggatcgg gcttgccgtt
    39361 gtcctgcggc tccagttcga tcaggaactg gccgccgccc atgcccagct cggcgatgat
    39421 gccggtggtg gtggccgaca gttcggcggc ggcaccgcga cggctggcgg tcagtacttc
    39481 ggcctgtacg cgccaggcgg cggcggcctt gtcgatctcg ccggccaggc gctgcaggcg
    39541 ctcgtcggcg ccgcgcaact gttccacttc ggcatgcatg cgttcgcgct gcgcgcccag
    39601 ctcgtccatc ggcacgcgat gcttgcgcgc caggtcgtgc aggcggccga ggcgccgctc
    39661 gttctcttcg aactgctcgg ggtcggcgtc gaggtcgtca tgcacgcggt ccagcagcga
    39721 aagggcttcg tgcagctgga tcgaggcatt ctcgatcagg ccgtccacct cgcccaggcg
    39781 cgggtcatgt tcgatcaggc gcgacagctc gtggcgcacc tgctgcagca ggtccagcgc
    39841 ggaactgccg tcgtcgccgt tgagctggtt gctggctgcc tggcaggcgg tcagcagggc
    39901 gctggcatgg gcctggcggc ggtggctggc gccgagcgcg gcgatcgact ccggttccag
    39961 gtcctcgcgg tccagttcgc gcagctggtg ctccaggaag cccatccggt cactcacgtc
    40021 gccctgttgc gacagcgcca gtgattcgtc gaccagtgcc tgccacgcgg cggcggcgcg
    40081 gcgcacctgg cggcgcgcgt cctcgttgcg ggcgtaggca tcgagcaggg ccagctgcga
    40141 cggacgggtc agcaacgcct gttgttcatg ctggccatgg atctccacca gcagcgcggc
    40201 caggtcggcc agctgtgcga gggtcaccgg acggccattg atccaggacc gcgagccgcc
    40261 gtcggcgcgg atcacgcggc gcagctgaca ctgatcttca tcgtccagct cgttgtcggc
    40321 cagccactgg cgcgcggcct gcagctggtc cagcgcgaac tcggcggaaa gctcggcgcg
    40381 ggccgcgcca tggcggacca cgccgctgtc ggcgcgcagg ccggacagga agcccagcgc
    40441 gtcgaccatc agcgacttgc cggcgccggt ctcgcccgaa accacggtca tgccgggccc
    40501 gaactccagt tcggtggcgc ggacgacggc gaaatccttg atcgaaagat gtctgagcat
    40561 gggtaagagg tatcagcagc cgcgcaacgc tagcacgcgg gcgagggagg tccaatgact
    40621 tgccaagggg atgcgccgcc attatctagt gtccgtgtct cacaggttga ttccatgcac
    40681 ggttctcccg accagcttgc cccgcgtgcg cgccatctgc tgcgcacgct gatcgcgcgt
    40741 tacatccagg acggcgagcc ggtcggctcg cagacgctgg cgcgtgtggc cggcctggag
    40801 gtcagcccgg ccaccatccg caacatcctc ggtgacctgg aggacctggg gctgctggcc
    40861 tcgccgcata cctcggccgg gcgcattccg accgcgcatg gctaccgggt gttcgtcgac
    40921 agcctgttgc agatgcagcc gccgggggag ggcgaactgg cccgcctgcg ccaggagctg
    40981 gccggaggcg gcagcaccca ggccctgctg ggcagcgcct cggagctgct gtcggcgatg
    41041 agccacttcg tcggcgtggt cagcgcgcca cggcgcgagc agttcgcctt ccgccagatc
    41101 gatttcgtgg cgctggacgg gcgccgggtg ctggcgatcc tggtgtttgc cgacaacgag
    41161 gtgcagaacc gggtcatcga gacccgccag gagttcgcgc cggggcagct ggagcaggtc
    41221 gccaactacc tcaactccca tttcgccggg ctgccgatgg ccgagatccg cacccgcctg
    41281 ctgctggagc tgcgtgatgc ccgctccgaa ctggagcagc tgctggcgca cagcatcgag
    41341 ctggccgagc aggccctgca gccagcggcc gacgacatgc tggtggccgg ccagacccgg
    41401 ctgatgggcg tgcaggacct gtccgacctg gagcgcctgc gcgagctgtt cgagctgttc
    41461 tccagcaagc gcgagatcct gcagctgctg gagcggacca tccaggcccc gggcgtgcgc
    41521 atcttcatcg gcgaggagac cggaatgatg ccgctgcagg gcgtttcgct ggtcacggcc
    41581 ccctataccg ccaacggcca ggtgctgggc gtgctgggcg tgatcgggcc caagcgcatg
    41641 gcctatgacc gcatgatccc gctggtccag gccaccgctg atgtgctggg cgcggccttt
    41701 tcgccggccg gtcgcacgcc ggggacatcc gacgcttgaa acgcagcatc ccgcccacac
    41761 tagggtgggt ggaggcggag attgaccgcc agggacccag acatgaacca cgaacatcca
    41821 gatatcgaat cccagcagac cgccgccgat gcggccgcca ccgccggcgt caacgacgaa
    41881 ctggagcgcc tgcgcgccga agttgaacag gtcagggccg atgcgctgcg tgagcgcgcc
    41941 gacctggaga accagcgcaa gcgcgtcgcc cgtgacatcg agcaggcccg caagttcgcc
    42001 aacgagaagc tgctgggcga gctgctgccg gtattcgaca gcctggatgc cggcctcaag
    42061 gccgccggcg atgacccgca cccgctgcgc gagggcctgg agctgaccta caagcagctg
    42121 ctgaaggtcg ccgccgacaa cggcctggtc ctgctggacc cgaccggcca gccgttcaac
    42181 ccggaacacc accaggcgat cagccaggtg ccgaccccgg gcgccgcccc cggcaccgtg
    42241 gtgaccgtgt tccagaaggg ttacctgctc aacgagcgcc tgctgcggcc ggcgctggtg
    42301 gtggtggccg ccgactgacg gcagcgccgg gccttgcccg gcaacgtttt ccaggcgctg
    42361 aacacagcgt tcgggagatg gcttgaatgt tccacgagcc tcccccacat cgtattcatc
    42421 caccggccga acggccggac tgaccccaac aagcatcctc aggagtctcc cccatgggca
    42481 agatcattgg tatcgacctc ggcaccacca actcgtgcgt ggcgatcatg gacggcggca
    42541 aggcccgcgt catcgagaat tcggaaggcg atcgcaccac cccgtcgatc gtcgcctaca
    42601 ccaaggacgg cgaagtcctg gtcggcgcct cggccaagcg ccaggccgtg accaacccga
    42661 agaacacctt ctacgcggtg aagcgcctga tcggccgcaa gttcaccgac gccgaagtgc
    42721 agaaggacat cgcgcacgtc ccgtacggca tcctggccca tgacaatggc gacgcctggg
    42781 tgtcgaccag cgacgggaag aagatggcgc cgcaggaaat ctcggccaag gtgctggaaa
    42841 agatgaagaa gaccgccgag gacttcctcg gtgagaaggt caccgaagcg gtcatcaccg
    42901 tgccggccta cttcaacgac agccagcgcc aggcgaccaa ggacgccggc cgcatcgccg
    42961 gcctggacgt caagcgcatc atcaacgagc cgaccgcggc cgcgctggcc tatggcctgg
    43021 acaagggcga caacaaggat cgcaagatcg tggtgtacga cctgggcggc ggcaccttcg
    43081 acgtctcggt gatcgagatc gccaacgtcg acggcgagaa gcagttcgaa gtgctggcca
    43141 ccaacggcga caccttcctg ggcggcgaag acttcgacaa ccgcgtcatc gagtacctgg
    43201 ttgaagaatt caacaaggac cagggcatcg acctgcgcaa ggacccgctg gccctgcagc
    43261 gcctgaagga cgccgccgag cgtgccaaga tcgagctgtc cagcgcccag cagaccgaag
    43321 tgaacctgcc gtacgtcacc gccgacgcct cgggcccgaa gcacctgaac atcaagctga
    43381 cccgcgccaa gctggaagcg ctggtggaag acctgatcaa gaagtcgatc gagccgtgcc
    43441 gcgtcgccct gaacgatgcc ggcctgcgtt cgagcgacat cagcgaagtg atcctggtcg
    43501 gtggccagac ccgcatgccg aaggtgcagc aggcggtgac cgagttcttc ggcaaggaac
    43561 cgcgcaagga cgtcaacccg gacgaagccg tggcactggg tgcggcgatc cagggcggcg
    43621 tgctcggcgg cgacgtcaag gacgtgctgc tgctggacgt gaccccgctg tcgctgggca
    43681 tcgaaaccat gggcggcgtg ttcaccaaga tcatcgagaa gaacaccacc atcccgacca
    43741 aggcctcgca ggtgttctcc accgccgagg acaaccagtc ggccgtgacc gtgcacgtgc
    43801 tgcagggtga gcgcgaacag gcccgcttca acaagtcgct ggccaagttc gacctgtccg
    43861 gcatcgagcc ggccccgcgc ggcctgccgc aggtggaagt gtccttcgac atcgacgcca
    43921 acggcatcct gcacgtgtcg gccaaggaca agaagaccaa caaggaacag aaggtcgaga
    43981 tcaaggccgg ttcgggcctg tccgaggaag agatcgcacg catggtcgcc gacgcggaag
    44041 ccaaccgcga ggaagacaag aagttccagg agctggtgca ggcccgcaac caggccgatg
    44101 ccctgatcca cggcacccgc agcgcgatca ccgagcacgg cagcaaggtc ggcggcgaag
    44161 tgatcggcaa ggtcgaggcg gccctggccg aactggaaac cgcaatgaag ggtgacgaca
    44221 aggcgcagat cgaagccaag tcgaaggtgc tggaagaagc cggccagtcg ctgttcgccg
    44281 cggcttcggc cgaccagggc ggtgccgccc cgggtgccga cgccggcaac gctggcaagg
    44341 gcaacgacga tgtggtcgat gccgagttca ccgaagtcaa ggacgacaag aagtcctgat
    44401 ccggaccgac gcgggacgct gcctggcagc gtcccgttgt cgcatcaggg tcctggccgc
    44461 caccggcgtg tcggggcgcc cgacgcaaga gcggacctgg ttccgctctt ccgctttgac
    44521 gaatcccgac tttccggaac cagattcacg atatgagcaa gcgcgattac tacgaagtgc
    44581 tgggcgttgc ccgcaccgcc accgacgacg agctgaagaa ggcctatcgt cgctgcgcga
    44641 tgaagttcca cccggaccgc aacccgggcg atgcggcggc cgaagcctcc ttcaaggagt
    44701 gcaaggaagc ctacgaagtg ctgtccgacg gcaacaagcg ccgcatgtac gacagccacg
    44761 gccacgctgc gttcgagcac ggcatgggcg gtggtggcgg tccgggtggc ccggacatga
    44821 acgatatctt cggcgatatc ttcggcaaca tctttggtgg tgcaggcggt ggcccgcgcc
    44881 aggcccgtcg cggtgccgac atcggctacg tgatggaact ggacctggaa gaagcggtgc
    44941 gtggcgttga gcgccgcatc gagattccga ccctggccga atgcggcgac tgcgatggca
    45001 gtggctccga agacggcaag gtcgagacct gcaatgtgtg ccatggccgc ggccaggtgc
    45061 gcatccagcg cggcatcttc gccatgcagc aggcctgcca caactgcggc ggccgcggcc
    45121 agatcatcgc caagccgtgc aagacatgcc acggcaacgg ccgtgtcgag gaagacaagg
    45181 tgctgtcggt gaaggtgccg gccggcgtcg ataccggcga ccgcatccgc ctgcagggcg
    45241 agggcgaggc cggtccggcc ggtaccccgc cgggtgacct gtacgtggaa gtgcgcgtgc
    45301 gcgagcacgc catcttccag cgcgatggcg acgacctgca ctgcgaagtg ccgatccgca
    45361 tctcgcaggc cgcattgggc gacaccgtgc gcgtggccac cctggggggc gaggcggaga
    45421 tccgcatccc ggccgagacc cagaccggca agctgttccg tctgcgcggc aagggcgtgc
    45481 gttcggtgcg cagccgcagc gagggcgatc tgtactgccg cgtggtggtg gagaccccgg
    45541 tcaacctcac caacgaacag cgcaagctgc tggagcagtt cgaagccacc ttcgtcggcg
    45601 aggaagcacg caagcactcg ccgaagtcgg ccaccttcat ggatggcgtg aagggcttct
    45661 gggaccgcat gacgtcctga gtttttcaac ggaagagttg aacgaaagcg ccgggccaag
    45721 cccggcgttg tcgtatgcgg tcaacggaaa aacgccgccg gcgtctgccc cagctgacgc
    45781 ttgaacatgc tggtgaacgc gctcgggctg tcgtagccca tcgccagtgc gacatcaatg
    45841 accttgtccc ccactgccag tcgttccatc gcggccagca gccgcgcctg ttgccgccac
    45901 tggccgaagg tcatgcccag ttcgctgccg aaacgccgct ggatggtttt cacgtccacc
    45961 tccagcgcct gcgcccagtc ctgcagcgtg gcgtcatcgc caggctgctt ctggatgtgc
    46021 tggcagatcc gctgcaggcg cgggtcggtc gcggcgggca gatgcagtgg cagcacgtcc
    46081 atgcgatgca gttcgtccag cagcaggcgc accacgcggc catcgcggct gtcttcgacg
    46141 tgctcgccct tgatcagcgt ggcggcctgc agcagctcac gcagtagggg ggccacctgt
    46201 accgcgaacg gttcggccgg caattgcggc gcgaacaacg ggtcgatgta caggctgcgc
    46261 atgtgcacgg cggcgatgca gtcgaccgcg tgcaccatgc cggccggcat ccagatcgca
    46321 cgggtcgagg gcaccaccca gcggcccact tccgagcgca ccaccatcag ccccgagatg
    46381 gcgtagacca gctggtggcg ctgatgcttg tggccagcga tgtgggtacc ggccgggtac
    46441 tgggtgaccc gataggtgac cgggcgatgc tgggggacgt cgcgccaggg cgccgccgga
    46501 tcgacgtcgc tggcaatgtc ctttttgcga taggccatga cccgaacgcg gcagaaggga
    46561 ggggagggca accgtagcat gcgtggctcg cccccaacct gactgcgtcc atgtccgccc
    46621 tggcttctcc cgcaacgacc tcacgcccgg tggctcccgg tgtgctggct gccatttcca
    46681 cctcgcatgt cgtcaacgac atgatgcagt cgctgatcct ggccatctat ccggtgatca
    46741 agggcggctt caatctcagc ttcacccaga tcggcctgat cacgctgacc taccagctca
    46801 ccgcctcgat cttccagccg ttggtcggca tggccaccga ccggcgcccg gcgccgtact
    46861 ccctgccgat cggcatggcc tcgaccctgt gcggcatgct gctgctcggc ttcgcgtcga
    46921 gctacgccgt ggtgctgctg gccgccgcga tggtcggcat cggttcggcg atcttccacc
    46981 ccgaggcctc tcgcatcgcg cggctggcct cgggcggccg tcatggcttc gcgcagtcgg
    47041 tgttccaggt cggcggcaat ttcggtaccg cgctcggccc gctgatcgcc gctgcggtga
    47101 tcgtgccgta tggccagcac gccgcctcgt ggttcgccgg tgcggccctg atcggcatcg
    47161 cgctgctgac ctatgtcggc cgctggtatg cgctgcacct gggcacgccg cgtccggcca
    47221 gcaccgcgtc gatggcgcct cggcatccgc cgcgcaccgt ggccaaggtg ctggcgatcc
    47281 tgctggtgct gatcttcagc aagtacttct acatggccag catcggcagc tacttcactt
    47341 tctacctgat ccaccacttc ggcattccgg tggcgcaggc gcagctgcac ctgttcgcat
    47401 tcctggtggc gtcagccgca ggtggtttcc tgggtggccc gctgggtgat cgcatcggtc
    47461 gcaagccgat catctggacg tcgatcctgg gtgtggcgcc gttcgcgctg atgttgccgc
    47521 atgcggatct gttctggacg acggtgctgg cggtgctgat cggcttcgtg ctgtcctcgg
    47581 cgttctcggc gatcgtggtc tacgcgcagg agatgatgcc gcaccgcatc ggcatggtgt
    47641 cgggcctgtt cttcggcttt gcgttcggca tgggcggatt gggcgcggcc gtgctcggcc
    47701 tgctggcgga caagaccagc atcgagtacg tctaccagct gaccgcgttc ctgccgctgc
    47761 tgggcatcgt ggctgcgtgg ctgccgccgt cgcggcctgc tgctcactga ggggttttgc
    47821 tttgcagggc ttgcagccct gcacctgctg caagccagag ccgaagcaac agccgaagct
    47881 ggctatccgt gggttggcgg ggtgggtccg gttgcagggg acgccgt
//
LOCUS       DAOKIP010000009        44515 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.009,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000009 DAOKIP010000000
VERSION     DAOKIP010000009.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 44515)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 44515)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..44515
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.009"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(10..1395)
                     /locus_tag="QEL58_000480"
     CDS             complement(10..1395)
                     /locus_tag="QEL58_000480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014645929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HDS1675002.1"
                     /translation="MSTALPAALVAELSALLGAEGWRMDDSALEANAQDNSWRHQRPA
                     AVALPANIEQVQALVRACRAHGIALVARGAGTGTTGAAVPLPGSIVLSFTRMDRILEI
                     RAGDRCAVVQPGVLNGTLQQALVPHGLFWAPDPSSAEICSVGGNLACNAGGPRAVKYG
                     TSRDNVLGLVAVTGTGEVIRCGGAYTKDSTGYDLTHLLVGSEGTLALIVEATLKLTPL
                     PVSQAGLRVLYRDADAAAAAVSRLMSQPVVPTRLEFMDARSLELLRLNGAEVPEAGAM
                     LLVEADGDHDTLPYMLQALASAAEGDGMIALDVAMEGRARDQLWAARKALSPALRSVA
                     PGKINEDVVVPVSRIPDLVAGVQALARDYTLTIVTFGHAGNGNLHVNILYHPDDAAEN
                     ARAHAALPKIFELTLALGGTLSGEHGIGLAKRDFMARAFSAETLATIRAIKAALDPDG
                     ILNPGKVLPPA"
     gene            complement(1700..2068)
                     /locus_tag="QEL58_000481"
     CDS             complement(1700..2068)
                     /locus_tag="QEL58_000481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008571510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YraN family protein"
                     /protein_id="HDS1675003.1"
                     /translation="MVAERSQRGSAVETAAEQHLQQAGLQPRARNVRYRGGELDLVMD
                     DAGTVVFVEVRYRARSDFGGGAASVDARKCRRLAHAAQLFLQDHPALANAPCRFDVVE
                     ASGEPPQLHWLRDAFRLDDC"
     gene            complement(2058..3779)
                     /locus_tag="QEL58_000482"
     CDS             complement(2058..3779)
                     /locus_tag="QEL58_000482"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002812401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein activator"
                     /protein_id="HDS1675004.1"
                     /translation="MNKPAARISALSLSLMLLAGCATTSLTSTPDSPAQSQALALIEQ
                     GKPRDAALQLEGLAATLRGGARSNALADAAWAWHLAGDSTRARSLLGQLTARQLSGAS
                     LQRYQLTGAELALADKQPAQALALLKDHADSVAVGLRTRWLLARAQALQGTGDAFGAA
                     AERARAHASLTGSARNDNQAAIAGLLGTLDDATLRSRAAALPANDPLYNFAGRALIAR
                     GLPLPRPFDRDGAAQFDTSKRPPALSDGYRPPVKLAVLLPLSGRLATAAQPVRDGLLA
                     AYYGETRRRPDINFIDTAGTPAGALAAYDKAVASGADFVVGPLGRDEVDAVYGRQQLQ
                     VPVLALNRGKDAPPAGSAGFSLAPEDDGIVAAEYLRGRERGKALVINSADDTGRRAAA
                     AFTQRFAQRGGQVVATVGVTDAVGDVGAQVRNAGQVDAVFLAVRAPQARLLAPQLALA
                     GAGGATRVGTSQLTVGSGKVEEDVALDGIVYPNEAWNVRSVSGLPSASQVASTLPSAR
                     GAAGRLFAFGADAWKITAYLDKLSNEGGLDGATGTLFLDSNGNILRQPAWSTFNGGRP
                     MPIVGGR"
     gene            3861..4679
                     /gene="rsmI"
                     /locus_tag="QEL58_000483"
     CDS             3861..4679
                     /gene="rsmI"
                     /locus_tag="QEL58_000483"
                     /EC_number="2.1.1.198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010481946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (cytidine(1402)-2'-O)-methyltransferase"
                     /protein_id="HDS1675005.1"
                     /translation="MSVPTLYVVATPIGNLADLSPRAQEVLRSVAAICAEDTRRSGQL
                     LSHFGIQQPLVALHEHNEEALSQRLVSRLQAGESLALVSDAGTPLVSDPGFRLVRAAR
                     AAGIKVSPIPGACAAIAALSVAGLPSDRFSFEGFLPAKASGRRDRLQLLAGEVRTMVF
                     YESSHRIAESLADMAAIFGGERPAVLARELTKLFETVLDGDLAGLLAKVEGDENQRKG
                     EFVVMVQGAGDDEEAQLAHGRRVYATLSEHLPPSTAAKLAAELTGAPRKALYGS"
     gene            complement(5555..6328)
                     /locus_tag="QEL58_000484"
     CDS             complement(5555..6328)
                     /locus_tag="QEL58_000484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011409027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV toxin-antitoxin system AbiEi family
                     antitoxin domain-containing protein"
                     /protein_id="HDS1675006.1"
                     /translation="MTDVEAKARKLLRRAGSLRARELVAAGIARVQLSRLVEAGALIR
                     LSRGVYALPGSDNGEADEGLRIIAERMPKVRLCLLSALRLHGLTTQAPFELWVAIGNS
                     DRPPRIDWPPLRVVRMSATTLQAGLEERRVGARRVYVSNVAKTVADCFKFRNLVGLDV
                     AIEALRDALGNRATTPDALMKYARLSRVARLMRPYIDALACPPLPCFLFPTAWPRSGS
                     DCSITRALAATTSSSCWTGSPLNACSTGFPPPRSATSSC"
     gene            6490..6841
                     /gene="rnpB"
                     /locus_tag="QEL58_000485"
     ncRNA           6490..6841
                     /ncRNA_class="RNase_P_RNA"
                     /gene="rnpB"
                     /locus_tag="QEL58_000485"
                     /product="RNase P RNA component class A"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00010"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00010"
     gene            complement(6881..7336)
                     /locus_tag="QEL58_000486"
                     /pseudo
     CDS             complement(6881..7336)
                     /locus_tag="QEL58_000486"
                     /inference="COORDINATES: protein motif:HMM:NF021996.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DM13 domain-containing protein"
     gene            complement(7438..8190)
                     /locus_tag="QEL58_000487"
     CDS             complement(7438..8190)
                     /locus_tag="QEL58_000487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014645935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NRDE family protein"
                     /protein_id="HDS1675007.1"
                     /translation="MCLLALGWMHHPRWRLVMTGNRDEFHARPTAALAPWQDETSVIG
                     GRDLRSGGGWAGVGAAGRMAVVTNVRDPLAAQTGPSRGALVADFLRGRDPAAVHIDRL
                     AAVAGAYAPFNLLLADGNSLEYLGNHPAERQTLGPGVHGMSNGALDAPWPKTRRLMAA
                     LSAWLQSGDGELAPLWTALADEHRPADGELPDTGIGLERERWLSPAFIRGDDYGTRAS
                     TVLLIDADGHGEIHECRFGPQGVALGQSRVDF"
     gene            8514..8960
                     /gene="mraZ"
                     /locus_tag="QEL58_000488"
     CDS             8514..8960
                     /gene="mraZ"
                     /locus_tag="QEL58_000488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_038200852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="division/cell wall cluster transcriptional
                     repressor MraZ"
                     /protein_id="HDS1675008.1"
                     /translation="MFQGETAITVDDKGRMAVPTAYRDLVARASNNRLVLTYNPFEAG
                     CLWLYAESEWERVRDDVMSKPNTQRVVRLLQQKLVGSAAHLELDGNGRISIPASHRGA
                     VGIEKKAVLLGMGDKFELWSEQAHRALIQQTLSDEDLGDGLLDLKL"
     gene            8975..9943
                     /gene="rsmH"
                     /locus_tag="QEL58_000489"
     CDS             8975..9943
                     /gene="rsmH"
                     /locus_tag="QEL58_000489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008268738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(1402)-N(4))-methyltransferase
                     RsmH"
                     /protein_id="HDS1675009.1"
                     /translation="MRPEAQTGHLPVSQSPAVHLPVLYTQVLEGLRVIENGRYLDGTF
                     GRGGHARGVLTQLGPEGRLLVMDKDPEAIAVAERDFAPDPRVSIFRGSFAQLLQWDAT
                     ADGLDGVLFDLGVSSPQLDVAERGFSFGKDGPLDMRMDPDSGESAAQWINRVEDREIA
                     DVLWTYGEERQSRRIARAIVARREKQPFTRTAELAELIASVMPRGKDKIHPATRSFQA
                     IRIHINRELADLEAGLDAAVERLKPGGRLAIISFHSLEDRIVKQYMNRLAKAPPANRR
                     LPEAEVFVPTLDLIGGAIKATDEELAANPRARSAVLRVAQKREADA"
     gene            9940..10203
                     /gene="ftsL"
                     /locus_tag="QEL58_000490"
     CDS             9940..10203
                     /gene="ftsL"
                     /locus_tag="QEL58_000490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010344441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsL"
                     /protein_id="HDS1675010.1"
                     /translation="MSRLLLIILLASTVASAIGVVFVRHRHRQTFIELSRAERKRDDI
                     NLEFGRLQLEQATLAEANRVDRIAREKLGMKFPEAADIVVVRP"
     gene            10200..12044
                     /locus_tag="QEL58_000491"
     CDS             10200..12044
                     /locus_tag="QEL58_000491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014645937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 2"
                     /protein_id="HDS1675011.1"
                     /translation="MSKTGRNRPRNAFNLRQRLRWVALALGLCSVSLVGRAAYVQIIN
                     SDFYQRQGEARYLRELPIKTSRGMITDRNGEPLAVSTPVASIWVNPQDLLRSPERIPE
                     LAQAVGMSVDELSSRLSQKSDKEFMYLRRRINPDEAEKVVALKIPGVAAQREFRRFYP
                     QGEAMAHVLGFTNIDDRGQEGLELAFDEWLRGKAGAKRVIRNRKGETVESDLLRAAEP
                     GKDLTLSIDRRIQYLAFKELRNALVANKAAGGSMVIMDVTTGEILAMVNLPTYNPNSL
                     TGALPDARRNRAVTDLVEPGSTMKPLTIATALQAGAVTKDTIIDTNPGYMTLGRFTIR
                     DVPRNNGVLNVTGVITRSSNVGAAKVAAKMPDQVFYDGVRRFGYGSVPHSGFPGESGG
                     VVLRPARWSGTTKTTMSYGYGLNVTPLQIATAYSALANGGRLIAPTFVKGQRNEGQQI
                     IDENVAKQVVAMMETVVTQGGAKQAAVLGYRVAGKTGTARKAGPGGYERGHYNALFAG
                     VVPATNPRFATVIVINDPQAGKFYGGLVSAPVYHNVMEGTLRLMDVPLDDLQSWLAAQ
                     QSGKVGHSASILPAPPAEAALPVDAAAEFDAALPSAHAQTPPATGGTQ"
     gene            12041..13549
                     /locus_tag="QEL58_000492"
     CDS             12041..13549
                     /locus_tag="QEL58_000492"
                     /EC_number="6.3.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005408076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,
                     6-diaminopimelate ligase"
                     /protein_id="HDS1675012.1"
                     /translation="MSPSMLLSQLLPDVALAGHDPVLTGLVLDSRAVRPGNAFVAIAG
                     FGAHGLGFVEQARAAGASAILFEPPAPAELPAPADAIAVPGLRARMGAMADQFHGAPS
                     RAMAMVGVTGTNGKTSTVQLLAQAWHLLGTPSGSIGTLGAGLYGAVEPTGFTTPLVLQ
                     MHALLAQLRDAGARAVAMEVSSHALDQGRVDAVHYDVAVFTNLTRDHLDYHGDMASYG
                     AAKARLFHRPGLKAAVVNLDDAFGRQLFAGLPASVQPIGLSSRGATDASVRAEALQLD
                     GRGIAFELVIDGQRAAVQSPLLGRFNVDNLLAVAGTLHAQGQPLPRIAEVLSALQPIR
                     GRMNRLGGEDGLPTVVVDYAHTPDALEQALDSLHGHLHGALFCVFGCGGERDTGKRPQ
                     MAAIAERLANQVIVTDDNPRGEDGDVIVADILAGFQNADAVTVQRSRARAIGLAVKRA
                     GAGDIILIAGKGHEPYQEVNGVRHDFDDTEVAAAALAAKAGVLAAQAGEGIA"
     gene            13546..14940
                     /locus_tag="QEL58_000493"
     CDS             13546..14940
                     /locus_tag="QEL58_000493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-
                     alanine ligase"
                     /protein_id="HDS1675013.1"
                     /translation="MKRTLLSLIAHWAGGEIHGDDVAIDAVSNDTRSLGPGSLYVALR
                     GERFDGHDFATDAQARGASALLVERLLPIELPQVLVADSELALAKIATGMQRDRDTEV
                     FAITGSNGKTSVKSLLLSILQQVAQHAHKVVYANPGNRNNEIGLPLAVIDAPEDADYA
                     VYEMGAGKPGDIAYLTDIARPRYALVNNIAPAHLERMGSLLGVAVTKGAIYAALPADG
                     VAVINVDDAYGRWFEQHFVGTPARCRVLRYGLEHTADITARDIRAGAQGSQFTLVSPM
                     GEARVVLGLPGRHNVSNALAAASLALAAGVDLALIAAGLAEAQPVPGRQIAHQLRNGA
                     VLVDDSYNANPGSLAAAIDALAAAPEEGWLVLGDMRELGPDAEALHAQAGLRARASGL
                     KRLYALGPLSAAAAAAFGEGGRHFTTHDALSQALKDELHAGVRCLVKGSRGSAMDTIV
                     KALLAQGEESPHVV"
     gene            14930..16015
                     /locus_tag="QEL58_000494"
     CDS             14930..16015
                     /locus_tag="QEL58_000494"
                     /EC_number="2.7.8.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006452808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-N-acetylmuramoyl-pentapeptide-
                     transferase"
                     /protein_id="HDS1675014.1"
                     /translation="MLYELARWLQQLESLFGLFNYQTFRAILAALTALFLSLWLGPAM
                     IRKLAQFKGGQPIRKDGPQTHFSKAGTPTMGGSLILLTITLSVLMWADLRNRYVWLVL
                     AVMLCFGAIGWYDDWIKIVRRDPNGLKSRWKYLLQSIFGLAAGVFLFYTADVPAALTF
                     YIPMFKSVALPLAGIGFVAIAYFWIVGFSNAVNLTDGLDGLAIMPTVLVACALGVFAY
                     ASGNVVFANYLQIPQIPGAGELVIICAAIAGAGLGFLWFNTYPAMVFMGDIGALALGA
                     VLGTIAVITRQELVLVIMGGVFVIETLSVMIQVASFKLTGKRVFRMAPIHHHFELKGW
                     PEPRVIVRFWIISVVLVLIGLATLKVR"
     gene            16017..17336
                     /gene="ftsW"
                     /locus_tag="QEL58_000495"
     CDS             16017..17336
                     /gene="ftsW"
                     /locus_tag="QEL58_000495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017118329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative lipid II flippase FtsW"
                     /protein_id="HDS1675015.1"
                     /translation="MNDLSRQATRLEAIEGSYDKWLLGAIIALTGVGVVMVASSSIAL
                     MSSPFYYLNRHLIFLAVGIVLAVIAARTELKSIEQYNQMLLLGCFVLLLAVFTPGLGS
                     TVNGARRWINLGISKFQTVEAVKVLYIVWLSSYLVRFRDEVNATWPAMLKPLGVAGAL
                     VVLLLLQPDFGSSTLLLAITAGMLVLGGVNMPRMSMPVIIGLVGMSALAIIEPYRMRR
                     ITSFLDPWADQQGDGYQLSNALMAVGRGEWTGVGLGNSVQKLYYLPEAHTDFIFSVTA
                     EEFGFLGTCVIVALYALLVGRTFWLGMRCVEMKRHFSGYIAFGIGLWISMQTFVSIGV
                     NLGILPTKGLTLPLISSGGSSVLMTCVAMGLLLRVSYELKRAERRQAVRIGGGDDAAA
                     EPQDAPVAPAAAHVPMSAEPVAAATANAARGTSRLQSRVEPTFGRLS"
     gene            17333..18421
                     /gene="murG"
                     /locus_tag="QEL58_000496"
     CDS             17333..18421
                     /gene="murG"
                     /locus_tag="QEL58_000496"
                     /EC_number="2.4.1.227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004143663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyldiphospho-muramoylpentapeptide
                     beta-N-acetylglucosaminyltransferase"
                     /protein_id="HDS1675016.1"
                     /translation="MSAAHDTARPVMILAGGTGGHIFPGLAVARVLRERGVPVTWMGA
                     DGAMETRLVPQHDIAIDTLAITGLRGKGKLALLAAPWRLMRALRAAGMIIRKRQPRAV
                     VAFGGFASGPGGMATRLHGLPLIVHEQNRAPGLTNRILSRYARRLLTGFPGTFAKREE
                     FVGNPVRAEIAAIAPPEQRFADRHGPLRVLVVGGSQGARALNTGVPQAIAALGADLPV
                     QVRHQSGEKMHAEAVEAYAKAGVQAEITPFIADMADAFAWADLVVCRAGASTLAELCA
                     VGVGSVLVPFPAAVDDHQTRNAEYLVERGAAVLLKQDGTLADGIAALLRDLSENPARR
                     MQMAQAARALAKVDAAERIADIILEEAV"
     gene            18462..19898
                     /locus_tag="QEL58_000497"
     CDS             18462..19898
                     /locus_tag="QEL58_000497"
                     /EC_number="6.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008268611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate--L-alanine ligase"
                     /protein_id="HDS1675017.1"
                     /translation="MIRRLHDTNDLVRAFPRVHFVGIGGTGMSGIAEVMLTLGYEVSG
                     SDNADNGATRRLAGLGARIMRGHSAANVLGTDCVVVSSAIREDNPELMEARSQRIPIM
                     PRAAMLAELMRFRRGIAVAGTHGKTTTTSLTAAVLSEGGLDPTFVIGGQLLAAGANAK
                     LGGGQWLVAEADESDGSFLRLNPLMSIITNIDADHLENYGNDFARVQAAFAEFLQRLP
                     FYGLAVLCIDDPEVAALAAKTPRHVMSYGMSPQADVRAENVVQEGSRMRFTLRLPQGT
                     SQEVVLALPGRHNVLNALAAAAVGWQLGVAPDAIARALEAFAGVGRRFNDLGEVTTAS
                     GAKVRIIDDYGHHPSELEAVFAAARGGWADKRLVVAFQPHRYSRTRDQFDKFAAVLSS
                     VDALVLSEVYPAGEEPIAGADSHALARAIRARGRSEPVVVGKAAELASVLPDVLQDGD
                     LLLMMGAGDIGAVASHIAVEGFKAEGEA"
     gene            19895..20857
                     /locus_tag="QEL58_000498"
     CDS             19895..20857
                     /locus_tag="QEL58_000498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019338071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HDS1675018.1"
                     /translation="MSTLTFPPLRVTDPAVFGRVAVLLGGSSSEREVSLDSGRNVLEA
                     LQARGIDAFAVDGIPALAKVLAAGGVDRVFNILHGHNGGGEDGIVQGLMDAFGVPYTG
                     SNVLGSALSMDKIRTKQVWLSLGLPTPQYRKVDSSTVHALAAELGLPVVVKPANEGSS
                     VGISRVTDEAGLDDAVALAARYDGQLLMEQMVVGDELTVAILGDVALPSIRIVPKGQW
                     YDYNAKYIAEDTQYLCPGLDGADEDEIRRIALAAFRAAGCRGWGRVDVMRDRASGRFF
                     LLEVNTAPGMTSHSLVPKAAAQAGIGFEELVWRVLEQTLEAPHA"
     gene            20854..21603
                     /locus_tag="QEL58_000499"
     CDS             20854..21603
                     /locus_tag="QEL58_000499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004143704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsQ/DivIB"
                     /protein_id="HDS1675019.1"
                     /translation="MNAVLRIFVWLLALSVVALPVVAVVNGWVGAERWPLAKLRVHGE
                     FKRVPAEQLQQVLLPYAHAGFFAVKLQDAQDALEKLPWVESAQVRKQWPDVLEVTLVE
                     HKPFARWGNDRLVSEQGKLFPTPKKLADLALPELDGPDSQTEEVMKLYSDSRALFAPA
                     GVDVRRVTMDARGSWSLVLSNGTEVVVGRDDARSRMQRFVKVLPQLNRQDAPIERADL
                     RYTNGFTLSWGTPATPAKTPATPASRTQERT"
     gene            21600..22835
                     /gene="ftsA"
                     /locus_tag="QEL58_000500"
     CDS             21600..22835
                     /gene="ftsA"
                     /locus_tag="QEL58_000500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019398559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsA"
                     /protein_id="HDS1675020.1"
                     /translation="MNRKGDKSLIVGLDIGTSKVVALVGEYSPGNPIEVIGIGSHESR
                     GLKRGVVVDIESTVQSIQRAVEEAELMAGCEIRSVYASISGNHVQCKNSPGIVPIRDG
                     EVTWGDLDRVLDAAKAVAIPADQKILHAIPREYVLDDSQEGIRNPVGMTGVRLEVHAH
                     LVVCAQSAAANISKCVQRCGLQVDDLVLSSLASSVAVLTADERELGVVLVDMGAGTTD
                     IAVFVQGAICHTASLPIAGDHVTNDIAHMLRTPTPEAEQIKVRYACALAQLATAEESI
                     QVPSVGDRPPRRMPRHSLAQAVQGRYEEIFEMVQAELRRSGFEELVRAGMVLTGGASK
                     MEGVVELAEEMLQMPVRVGIPQHVTGLGEVVGNPVHATGVGLLLMGSQIEHPRRPSLP
                     TGRAGSMFKKLKTWFRGEF"
     gene            23006..24241
                     /gene="ftsZ"
                     /locus_tag="QEL58_000501"
     CDS             23006..24241
                     /gene="ftsZ"
                     /locus_tag="QEL58_000501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017170527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HDS1675021.1"
                     /translation="MAHFELIEKMAPNAVIKVVGVGGGGGNAVAHMVNSAVDGVEFIT
                     ANTDSQAIKNCGAKLQLQLGTNVTKGLGAGANPEVGRQAALEDRERIMDALQGADMVF
                     ITAGMGGGTGTGAAPVVAQLAKEMGILTVAVVTKPFPFEGRRRMQVALKGIEELSQHC
                     DSLITIPNEKLITVLGRNATMIQAFRAANDVLQGAVQGIADLIVRPGLINVDFADVRT
                     VMSEMGLAMMGTGTARGDDRAQAAAESAIQNPLLDDVNLAGANGILVNITAGADFTMA
                     EFDEIGRTIDGFASEDATVVVGTVLDPDMQDEVRVTVVATGLNRVSASKTQRPGERAP
                     IKLVRNATTGQPEFGDFDNGGDAVSKAVGGMGLGLRRASSDTAAASTPSAPAASAPAA
                     AELPNDYLDIPAFLRRQAD"
     gene            24435..25346
                     /locus_tag="QEL58_000502"
     CDS             24435..25346
                     /locus_tag="QEL58_000502"
                     /EC_number="3.5.1.108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005415298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-acyl-N-acetylglucosamine deacetylase"
                     /protein_id="HDS1675022.1"
                     /translation="MIQQRTLKNTIRATGVGLHSGDKVYMTLRPAPVNHGIVFRRVDL
                     DPVVEVPAKAELVTEVTLCTGLTCNDAKIQTVEHLMSALAGLGVDNIIVELSSAELPI
                     MDGSAGPFVFLLQSAGIVEQDAPKRFIRVLKTVEVTEGDKVARFTPYEGYKLGFTIQF
                     DHPMIPAKQSRQEIEFSTLAYTKEISRARTFGFMRDLEYMRERNLGLGGSMDNAIVLD
                     EFRVLNEDGLRYADEFVRHKILDAIGDLYLAGGQVLGAYEGFKSGHALNNKLVRALMA
                     DATAWEWVSFDSPATPDPVEYATPAYA"
     gene            complement(25629..26078)
                     /locus_tag="QEL58_000503"
     CDS             complement(25629..26078)
                     /locus_tag="QEL58_000503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014035989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF721 domain-containing protein"
                     /protein_id="HDS1675023.1"
                     /translation="MSEPKSSVRPASVPKPALDAVMADKSGNPLRRALWLDALDRQLR
                     PQLPPPLRSRCRLANVDGEHLVFLVESPVWHAKVRLAEAQLLDAARSIGLKATRVTIK
                     TASPTPTRSPALDNRNGPHAVSAATHKGLRDALACLQDVPSKPKKRS"
     gene            26091..27047
                     /locus_tag="QEL58_000504"
     CDS             26091..27047
                     /locus_tag="QEL58_000504"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017158828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HDS1675024.1"
                     /translation="MAFKKIVIKTREGQAKASPITRLRFYFEDRPRALLGSVLGVGCI
                     IGLAGGIGASALNDSRLQAKVERQDAELAKVKRDAQTQVNALAARLGELQAQATRLNA
                     LGERLTQMGKLEDGEFDFNETPGLGDGDAGGPTSDIPVKDVNADLQVLEQRFAASGRQ
                     LSVMESLMFDHQLQQNAVPSRMPIRNSYVTSGFGTRADPFGRGAATHKGMDFHARVGD
                     PVMAVAEGVVSFAGVKGGYGNVVDVDHGNGYVTRYAHNSRLVVKAGDLVRAGQEVAKA
                     GSTGRSTGAHVHFEVWENGNVVNPRKFLGDGGNTPVGRISRG"
     gene            27285..30017
                     /gene="secA"
                     /locus_tag="QEL58_000505"
     CDS             27285..30017
                     /gene="secA"
                     /locus_tag="QEL58_000505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017112773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecA"
                     /protein_id="HDS1675025.1"
                     /translation="MINSLLTRVFGSRNERQLRQLNRIVAKINALEPEIEKLSDEQLQ
                     AKTPEFKQRIAGGEALDKVLPEAFAVCREAGRRVLGMRHYDVQLIGGMVLHLGKIAEM
                     RTGEGKTLVATLPVYLNALEGKGVHVVTVNDYLARRDAAQMGKLYNWLGLSVGVVYPG
                     MPHSDKRDAYASDITYGTNNEFGFDYLRDNMALSKADRYQRGLHYAIVDEVDSILIDE
                     ARTPLIISGPADDSPELYIRVNRVVPNLVKQEVEDGEGDFWVDEKGKQVHLSEAGMEH
                     AEQLLVDAGILNAETEGLYAPQNLTVVHHLNAALRAHAIYQRDVDYIVRDGEVVIVDE
                     FTGRTLSGRRWSDGLHQAVEAKEGVPVQRENQTLASITFQNLFRMYKKLSGMTGTADT
                     EAFEFQSIYGLEVVVIPTNRPTIRKDSPDQVFLNRKGKFNAVLADIEECAKRGQPVLV
                     GTTSIETSEMLSEHLRKAGVQHEVLNAKQHDREATIVANAGRPAAVTIATNMAGRGTD
                     IVLGGSLEAEIHELGEDATDAQKAAVKAEWQKRHEAVKAAGGLHIVGTERHESRRIDN
                     QLRGRSGRQGDPGSSRFYLSLEDNLMRIFASDWVQKAMRMMGMKEDDVIEDRLVSRQI
                     EKAQRKVEAHNFDIRKNLLDFDDVNNDQRKVIYAQRDELLDAESVKANVDGIRDDVIF
                     DVVARFVPPNSIDEQWDLRGLEATLESDFGLQMSLTDLVKDHEELDAEAIAAKVQERV
                     NQHFAEKEAGVGEETMRALEKHVMLTVLDQSWKEHLARMDYLRQGIYLRGYAQKQPKQ
                     EYKKEAFELFSDMLENVKREVVTLLSRVRIRSDEEVQALEAAERQQAQARLSQSQFQH
                     QDAGGYSADEEAAQVEAERQGVAQLQRDEPKIGRNDPCPCGSGKKYKHCHGQLS"
     gene            30123..31079
                     /locus_tag="QEL58_000506"
     CDS             30123..31079
                     /locus_tag="QEL58_000506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Nudix family hydrolase"
                     /protein_id="HDS1675026.1"
                     /translation="MAPPTRSIHVVAAVITDARGRVLLNRRTENRDMAGLWEFPGGKR
                     ESGETSEQALVRELREELGIEADVGEWLMDVPQRYPDKHLTLEVRHVRSWKGTPRGRE
                     GQAITWVAPDKLGRYSMPPADLPVVAALRQPDSYLITPAPADDADSVQQWHDQLQRAV
                     AAGQQRIQLRLPPAHPQRQAMIEQVVRAHRRSGVQWLLNRDIELARALSVGVHLGSEQ
                     LQQLSQRPLPEGQLVAASCHDLQQLQAAQQLGCDFAVLGPVQATASHPDAAPLGWDAF
                     AELRAQVSLPIYALGGMGSGHITEARRHGGQGIAAIRGLWPA"
     gene            complement(31169..31753)
                     /locus_tag="QEL58_000507"
     CDS             complement(31169..31753)
                     /locus_tag="QEL58_000507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4124 domain-containing protein"
                     /protein_id="HDS1675027.1"
                     /translation="MIRLSFLLLLLPLWSATSVAHAQSTRLNRCTDAQGQSVYTDRPC
                     DSLGAQSRLPPPAPTGSTLQRDTLGARCPRRLSELVEALRTGILSNDVNRLSSLYLWG
                     AVSDAGAQRILGQLESLARRPLVDVVPVYPRQEQDTSQALEQGDPVPGSEPEPAAARH
                     PVGLRLEQTLPGSVARASTVLGLRRQYGCFWITL"
     gene            complement(31794..32621)
                     /gene="metF"
                     /locus_tag="QEL58_000508"
     CDS             complement(31794..32621)
                     /gene="metF"
                     /locus_tag="QEL58_000508"
                     /EC_number="1.5.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylenetetrahydrofolate reductase [NAD(P)H]"
                     /protein_id="HDS1675028.1"
                     /translation="MTAISFEFYPPKTDEQRSQLDRAADKLKDYGPEYVSCTFGAGGS
                     TLSYTSETVRHLNQHHGFEAAPHLSCVGGTRQEIRELLKLYRAIGCDRLVALRGDLPS
                     GMGFPGDMRYAAELIAFIRAEHGDAFRIEVGAYPETHPQASDALADLKHFKAKIDAGA
                     DAAITQYFYNPDAYFHFVDAVQRLGVQVPITPGIMPIANFSQLRRFSEQCGAEIPRWI
                     SRRMQAYGDDVDSVRAFGTEVVAKLCQRLIEGGAPGLHFYTLNLAKPTTSVLKLLQL"
     gene            32824..33756
                     /locus_tag="QEL58_000509"
     CDS             32824..33756
                     /locus_tag="QEL58_000509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019338076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDS1675029.1"
                     /translation="MKIFLALWYAMKALARLAMIGMAMAVLGSGSAHAAPTRGPAPGK
                     VQVEVVGKGRPLLMIPGLNSSAEVWRETCLALKDVQCHLVQLPGFAGAAPADPRLAGF
                     LPAMRAQLLAYLHDQHLGPVVVIGHSLGGLLGLQMAQAEPKAVSALVVVDALPFLPAA
                     RDPNATADSVRPMAEQLRKGTLAADAAQWQAQLKAGLPGMTRDPQRQAELGRWGESSD
                     RQTTADAMHAVMTTDLRDSIASISAPTLVLGSWAGYQPMGGTEASTRAVFQAQYATLH
                     DVQIAMSAQGFHFLMWDDPSWLRGQVQAFLDRHP"
     gene            33781..34827
                     /locus_tag="QEL58_000510"
     CDS             33781..34827
                     /locus_tag="QEL58_000510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019338077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HDS1675030.1"
                     /translation="MPDSSSSVRFWLLNALVWALYAIAGLGLRHAYLADAGSAGVLIT
                     VGLAVSLFGCSGGIRALALRAGWWSRGTAGLLLRLAVSVALGAALAQALVIIALHTAL
                     ALGWVDAGRQVADFSPKALLLYWYTTAVMLALWTALWAGLHSLRRIRGAELARLRAEA
                     ERSALERDALRARLNPHFMFNALNNLRALILEDPERARDMVTRLSRTLRQALAHNRNE
                     QVTLAEELAVVDDYLAIEAIHFEQRLQVRQQIDADATQAQLPAMALQLLVENAIKHGI
                     ASRPGGGEVQIRATLDNDVLRLQVDNPLGSAIEPTHGHGVGLAYLRAQLGTQGRFTLQ
                     PVGDRMQAVLEIAQ"
     gene            34824..35555
                     /locus_tag="QEL58_000511"
     CDS             34824..35555
                     /locus_tag="QEL58_000511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDS1675031.1"
                     /translation="MSGMLRVLIVDDARLARQELRTLLSALPWVQCVGEADDVPAARE
                     AIATLAPDLVLLDVQMPSGSGFDVLDGLESVPAVVFVTAFDGYAVRAFQANALDYLVK
                     PVEAPRLLEALQRARQRGRVAGETPEPRSTLGAQDQVFVREGERCWFVAVSEIRRLVV
                     DGNYTRLWFRDQNALLTRSLSALEARLPQELFFRANRNTLVNLRRIRAVTPSIGDGYD
                     LALDDGSEVEVSRRQARELRERMAL"
     gene            complement(35562..37079)
                     /locus_tag="QEL58_000512"
     CDS             complement(35562..37079)
                     /locus_tag="QEL58_000512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014035998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HDS1675032.1"
                     /translation="MEAARALPRPAPRRRWLKVLAAFLLAPPLLFAAALFWPLPAPPL
                     PEPGNSRLIVNARVVDVVRGQVSEPTTVTLHNGTITAIGESVADAALPVFDAGGRWLL
                     PGFWDMHTHAMQLSPQLQFPLMLANGITGTRDMMDCPQATDPLIACVADKRHWTTQAI
                     AGQQVAPRFVQVASFYFEDPLLAPEAAAERARTYSARGVDALKVYNRLRADTYQRLAT
                     EAQQLRRPLVGHLPKAVPLETALQAGQRSFEHAHLFVRHCFDNAAAWRGGTLDGEDPT
                     ALAERMVSGYQPALCSEAFGLMQASAAAFVPTHVTREEDARARDPAFVNDPRLAYLDP
                     LSRWAWRDDLQATVEHYPGLRGEDVLKAYFAHGLALTGAAHRAGVTVLVGTDTGLGGF
                     RYHDELQWLRRAGLSQADVLRAATLQAAHHLELQASHGSIGVGKAADLVLLDGNPLHD
                     TANTRRVHAVLLAGHLYDRPRLDALQAYARAQARSPAVMARLLWGFVTSPVSAEL"
     gene            37215..37772
                     /locus_tag="QEL58_000513"
     CDS             37215..37772
                     /locus_tag="QEL58_000513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005412259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3228 family protein"
                     /protein_id="HDS1675033.1"
                     /translation="MSIVLTDFARPRLFPRVPRGNTIQDCTAEQFEAHLNAHAPLKVL
                     DGYAPFCKLFVYENWTSTRCLTVPVTEANRHQLRSGYEARNRDELPVLVRWFEGVESP
                     RANYLVVILYSAEQLAREGSPIEADWGIVGCIYTAEPEEVPMAPITMMRNALGVEEGG
                     SGVPLDREAYQRSVAFWESNANWRP"
     gene            37873..38508
                     /locus_tag="QEL58_000514"
     CDS             37873..38508
                     /locus_tag="QEL58_000514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HDS1675034.1"
                     /translation="MAVWTRMIPVLLAGILPAAAVLAAKPAADTACAPLAAASGLRDA
                     SVTALSMQPRDGHCVVEVTASDGKGLLRQQQMLEILAQHACAAPAEVTADNLRPSLLL
                     RTPKRCAARRSQDLFAGEGDPWLQPRGKLPRYPREAMDQGLSGRSLLKALIDANGAVV
                     AVIVETSSGHAVLDEAAVEELRGWHFLRGDAQSTVPALTIVRVPMRYELVE"
     gene            complement(38541..39026)
                     /locus_tag="QEL58_000515"
     CDS             complement(38541..39026)
                     /locus_tag="QEL58_000515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014036001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675035.1"
                     /translation="MRWPWFAAPSPRLEDPQADVLLQDLLSRDGARITDAARTVARLF
                     SASSLEALAVHTDLIEKCCQGIALGGMLISNQAHLKAALQRLRYWQARQDCLCALNPG
                     YPFFDPRRLLEQGQMQLLSVQDAEDGWGDCHTVACTQCGQHWQAIDREYHYPWWEWKA
                     I"
     gene            complement(39026..39499)
                     /gene="ybaK"
                     /locus_tag="QEL58_000516"
     CDS             complement(39026..39499)
                     /gene="ybaK"
                     /locus_tag="QEL58_000516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cys-tRNA(Pro) deacylase"
                     /protein_id="HDS1675036.1"
                     /translation="MTPAINLLKREKIAHTVRSYVHDAHAESYGGEAVDKLGLDPAQV
                     FKTLLASTETHELLVAIVPVAGQLDLKALAEAARCKKCEMAAADAAQRATGYLVGGIS
                     PLGQKKRLRTFLDASAEVLPMLHVSAGRRGLEVELAPDDLLRLTAGHYAAIGKAR"
     gene            39533..40219
                     /locus_tag="QEL58_000517"
     CDS             39533..40219
                     /locus_tag="QEL58_000517"
                     /inference="COORDINATES: protein motif:HMM:NF015506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HDS1675037.1"
                     /translation="MTEAIAGGASTHGVADSGQQDAAQGSEVVYQRMIAAGLLAGMMV
                     VAGPALANEGRCTRGQAVRDLIDAGMVSMASHRKGDQCRFTGVGSDIRATWRQALFLA
                     ALAGNCRGIAMEVDPKQDTRMGIRIPERCLVDTDPPDAPPVGWWPLSSPAPRYPQEAY
                     KQGLKGTTVVLVVINREGRVTGRIIAESSGHPTLDAAAVDAASAWTFTSKRGDPPDIS
                     LARIPVNFDF"
     gene            complement(40310..41755)
                     /locus_tag="QEL58_000518"
     CDS             complement(40310..41755)
                     /locus_tag="QEL58_000518"
                     /EC_number="3.13.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011035988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylhomocysteinase"
                     /protein_id="HDS1675038.1"
                     /translation="MNAVAKTFSTEGDYKIRDITLADWGRKELDIAEHEMPGLMSIRR
                     KYQAELPLKGVRVTGSLHMTIQTAVLIETLKDIGADVRWASCNIFSTQDHAAAAIAAT
                     GTPVFAWKGETLEEYWDCTLDALTFTLADGTLTGPELVVDDGGDVTLLIHKGYELENG
                     SDWVNTASSSHEEQVIKNLLKRVAKERPGYWGRVVKDWKGVSEETTTGVHRLYQLAQA
                     GTLLIPAINVNDSVTKSKFDNLYGCRESLADGLKRAMDVMLAGKVAVVCGYGDVGKGC
                     AASLRAYGARVIVTEIDPICALQAAMEGYEVNTIESTLGRADLYVTTTGNKDIIRIEH
                     LSAMKDQAIVCNIGHFDNEIQVDALVSFAGIKHVNIKPQVDKYIFPNGNAIFLLAEGR
                     LVNLGCATGHPSFVMSNSFANQTLAQIDLWANKDSYEKKVYLLPKKLDEEVARLHLEK
                     IGVKLTTLSQEQADYIGVPVEGPFKPDHYRY"
     regulatory      complement(41792..41875)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF01057"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="S-adenosyl-L-homocysteine riboswitch; Derived by
                     automated computational analysis using gene prediction
                     method: cmsearch."
                     /bound_moiety="S-adenosyl-L-homocysteine"
                     /db_xref="RFAM:RF01057"
     gene            41996..44512
                     /locus_tag="QEL58_000519"
     CDS             41996..44512
                     /locus_tag="QEL58_000519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019338085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HDS1675039.1"
                     /translation="MSMHTRRARRWTGLVLSMGLLAVAPLAFSATPQPAAAQAQGVTS
                     YELPSAALQAVVDAPRAPSLFLSPRRDVAALMQMPSLPSIQVVAQPELKLAGQRINPR
                     TFSDSRFSFGQKLWLMNVADGKERPISGLPGTLSIASLMWSPDQKWLAFNQVDAASGA
                     NELWLVDVAAGSARRLVAGLNTVMGSGYQWLPDSRGLVVFTRPANLGAAPAADGIPTG
                     PAVQQTSQGGGVVSIRTYQDLLKNEADARQFDYYATTQPVEVSLDGNTRPIGAAGIFM
                     GFSVSPDGRYVLRQPVQRPYSYVVPVDSFPRRIEVIDRASGKLVHTVAVRPLVEGLPT
                     GNDAEVTGVRDIRWRGDADATLVWAEAQDGGDPNREAKVRDAVLMQAAPFDKPPVTLA
                     QLGSRLAGISWGRGDLALLTESWWKTRKTKTWLIAPDNAGAEPRLLWDRDAQDRYADP
                     GRPLMSSDDRGRSLLQTSTDGSSLYLAGAGASPEGDRPFVDRFDIATGKATRLFHSQA
                     PSYSLPVALLDEQGSSLLLSRESPDEPANFYVQSLADAGAAPRALTHFAHPLPQLKGV
                     QKEQIRYKRKDGVDLTATLLLPPGYDPKRDGPRPLLMWAYPGEFKSAAAASQVTDSPY
                     RFNAISYWGPQAFLAKGYVVLASPSMPIIGEGDKEPNDTYIEQLVANAQAAVDEVVRR
                     GVTDREHIAIGGHSYGAFMTANLLAHTRLFKAGIARSGAYNRTLTPFGFQAEERNYWQ
                     AQDVYQKMAPFNYADRIKDPVLFIHGVDDNNSGTFPIQSERMFAAVKGLGGSARLVML
                     PNESHAYRARESIMTMLAESERWLEQTIGPAEQAKAKKKR"
BASE COUNT         7249 a        14582 c        15552 g         7132 t
ORIGIN      
        1 tgcacgtcct caggccggcg gtagcacctt gccggggttg aggatgccat ccgggtccag
       61 cgcggccttg atcgcgcgta tcgtcgccag cgtttccgcg ctgaaggccc tggccatgaa
      121 atcgcgcttg gccaggccga tgccatgctc gccggagagc gtgccaccca gtgccagcgt
      181 cagttcgaag atcttcggca gcgcagcatg cgcacgggcg ttctcggcgg cgtcgtccgg
      241 gtggtacagg atgttgacgt gcaggttgcc gttgccggca tggccgaagg tgacgatggt
      301 gagcgtgtag tcgcgtgcca gtgcctgcac gcctgctacc agatcgggaa tgcgcgatac
      361 cggtaccacc acgtcttcgt tgatcttgcc cggggcgacg ctgcgcaatg cgggcgaaag
      421 tgctttacgt gcggcccaca gctgatcgcg cgcgcggcct tccatcgcca cgtccagcgc
      481 gatcatgccg tcgccttcag cggcgctggc cagtgcctgc agcatgtagg gcagggtgtc
      541 gtggtcgcca tcggcttcga ccagcagcat cgcgccggcc tcgggtactt cggcgccgtt
      601 gagccgcagc agttcaaggc tgcgtgcatc catgaattcc aggcgcgtgg gcaccaccgg
      661 ctgtgacatc agacgcgata ctgcggcggc ggcagcatcg gcatcgcggt acagcacgcg
      721 cagaccggcc tggctgaccg gcagcggggt cagcttcaag gtggcttcca cgatgagcgc
      781 gagcgtgcct tcgctgccca ccagcaggtg ggtgaggtcg tagccggtgg aatccttggt
      841 gtaggcgccg ccgcagcgga tcacctcgcc ggtgccggtg accgccacca ggcccagcac
      901 gttgtcgcgg ctggtgccgt acttcaccgc gcgcgggccg ccggcattgc aggccaggtt
      961 gccgcccacg ctgcagatct ccgcgctgga cgggtccggc gcccagaaca ggccgtgcgg
     1021 taccaatgcc tgctgcagcg tgccgttcaa cacgcccggc tgcaccaccg cgcagcggtc
     1081 gccggcgcgg atttcaagaa tgcggtccat gcgggtgaac gacagcacga tgctgcccgg
     1141 caacggtacc gccgcaccgg tagtgccggt gcctgcgccg cgtgcgacca acgcgatgcc
     1201 atgcgcgcgg caggcacgca ccagtgcctg tacctgttcg atgttggccg gcagcgccac
     1261 cgccgccggg cgctggtggc gccatgagtt gtcctgcgcg ttcgcctcca gcgcgctgtc
     1321 gtccatgcgc cagccctctg cgcccagcag ggcagacagt tcggcaacca gtgcggcggg
     1381 cagtgcggta ctcatgacgg atctcgtggg gaagcggggg aatcaacggg gaagcgcgcc
     1441 ctggtgggtg ccgaccaaag tcgcccgcta ccgggctgcg cgcttttggt aggtgccaac
     1501 cttggttggc acagaagcgc cgaccaaggt cggccactac cagagcatgt gggcgccgac
     1561 cagggtcggc ctccgccggg ctgcgcgctc ttggtaggtg ccaaccttgg ttggcacaga
     1621 agcgccgacc aaggtcggcc actaccagag catgtgggcg ccgaccaagg tcggccacta
     1681 ccaaaacgaa gggttgccat cagcagtcgt ccaaccggaa cgcatcacgc agccagtgca
     1741 gctgtggcgg ttcgccactg gcttcgacca catcgaagcg acaaggcgca ttggccagcg
     1801 cggggtggtc ctgcaggaac agctgcgcgg catgcgccaa gcgccggcac ttgcgggcat
     1861 ccaccgacgc ggcgccgcca ccgaagtccg aacgcgcgcg gtaccgcact tccacgaaca
     1921 ccacggtgcc ggcgtcgtcc atcaccaggt ccagttcgcc gccgcgatag cgcacgttgc
     1981 gtgcacgtgg ctgcagcccg gcctgttgca gatgctgctc ggcggcggtt tccaccgccg
     2041 agccacgttg gctgcgctca gcgaccaccg acgatcggca tcggccggcc gccattgaag
     2101 gtggaccacg ccggctggcg caggatgttg ccgttgctgt ccaggaacag cgtgccggtg
     2161 gcgccgtcca ggccgccttc gttggacagc ttgtccaggt aggcggtgat cttccaggcg
     2221 tcggcgccga aggcgaacag gcggccggcc gcgccgcgtg cgctgggcag ggtgctggcc
     2281 acctggctgg ccgatggcag gccggacacg ctgcgcacgt tccaggcttc gttcgggtag
     2341 acgatgccgt ccagcgccac gtcttcttcc accttgccgc tgccgacagt cagctgcgaa
     2401 gtgccgacgc gggtggcgcc gccggcaccg gccagtgcca gctgtggcgc cagcaggcgc
     2461 gcctgcggtg cgcgtacggc gaggaacacg gcatcgacct ggccggcatt gcgcacctgt
     2521 gcgcccacat cacccaccgc atcggtcacg ccgaccgtgg ccaccacctg gccgccacgc
     2581 tgggcgaagc gctgcgtgaa ggcggcggcg gcacggcggc cggtgtcgtc ggcgctgttg
     2641 atcaccagtg ccttgccacg ctcgcggcca cgcaggtatt cggcggcgac gatgccgtcg
     2701 tcttccgggg ccagcgagaa gccggcgctg ccggccggcg gtgcatcctt gccgcggttc
     2761 agcgccagca ccggcacctg cagctgctgg cggccataca ccgcgtccac ttcgtcgcgg
     2821 cccagcgggc cgaccacgaa gtcggcaccg gaggcgacgg ccttgtcata cgcggccagt
     2881 gcgccagccg gggtaccggc ggtgtcgatg aagttgatgt ccgggcgacg gcgggtctcg
     2941 ccgtagtagg cggccagcag gccatcacgc accggctgcg cggcggtggc cagacggccg
     3001 ctgagcggca gcagcacggc cagcttgacc ggcgggcggt agccatcgct cagcgccggc
     3061 gggcgcttgc tggtatcgaa ctgggccgcg ccatcgcgat cgaacgggcg cggcagcggc
     3121 aggccgcgcg cgatcagcgc acggccggcg aagttgtaca gcgggtcgtt ggccggcaac
     3181 gcggcggcac ggctgcgcag ggtggcgtcg tcgagggtgc cgagcaggcc ggcgatggcc
     3241 gcctggttgt cgttgcgggc gctgccggtc aggctggcat gggcgcgggc acgttcggcg
     3301 gcggcaccga aggcatcacc ggtgccctgc agtgcctggg cgcgtgccag cagccagcgg
     3361 gtgcgcaggc cgaccgcaac gctgtcggca tgatccttca gcagtgccag cgcctgcgcc
     3421 ggttgcttgt cggccagggc cagctcggcg ccggtcagct ggtagcgctg caggctggcg
     3481 ccggacagct ggcgggcggt cagctggccc agcaggctgc gcgcgcgggt gctgtcaccg
     3541 gccaggtgcc aggcccaggc cgcatcggcc agcgcgttgc tgcgcgcgcc cccgcgcagg
     3601 gtggcggcca ggccttccag ctgcaatgcg gcgtcgcgcg gcttgccctg ttcgatcagc
     3661 gccagcgcct ggctctgggc cggcgaatcg ggcgtgctgg tcaggctggt ggtggcacag
     3721 ccggccagca gcatcagcga caacgacagg gcggagatcc gtgcggcggg cttgttcatg
     3781 atcaggtcca tgcgatgggg gcagcggcct tggccgggta cacgctacga ttctaccctt
     3841 gccccgtgag taccgctgaa atgagtgtcc caaccctgta cgtcgtcgcc accccgatcg
     3901 gcaacctggc cgatctgagc ccgcgcgcgc aggaggtgct gcgttcggtg gccgccatct
     3961 gtgccgagga cacccgccgc agcggccagc tgctgtccca tttcggcatc cagcagccgc
     4021 tggtggccct gcacgagcac aacgaggaag cgctgtcgca gcgcctggtg tcgcgcctgc
     4081 aggccggcga atcgctggcg ctggtcagcg atgctggtac gccgctggtc agcgaccccg
     4141 gtttccgcct ggtgcgtgcg gcgcgcgcgg ccggcatcaa ggtcagcccg attccgggcg
     4201 cctgcgccgc catcgccgcg ctgagcgtgg ccgggttgcc cagcgaccgc ttcagcttcg
     4261 agggcttcct gccggccaag gccagcggac gccgtgaccg cctgcagttg ctggccggtg
     4321 aagtgcgcac gatggtgttc tacgaatcct cacaccgcat cgccgagtcg ctggccgaca
     4381 tggccgcgat cttcggcggc gagcgcccgg cggtgctggc gcgcgagctg accaagctgt
     4441 tcgagaccgt gctggatggc gacctggcgg gtctgctggc gaaggtggaa ggcgacgaga
     4501 accagcgcaa gggcgagttc gtggtgatgg tgcagggtgc tggcgatgat gaggaggcgc
     4561 agctggcgca tggccgccgc gtctacgcca cgctgagcga gcacctgccg ccgtcgacgg
     4621 ccgccaagct ggccgctgaa ctgaccggtg caccgcgcaa ggcgttgtac ggcagttgat
     4681 ggatcgtgcg gaccaaggtc cgcacccacc agagcggaat ccgcacccac cagggcagaa
     4741 tccgcaccca ccggagcagc ggcatcggta gatccacgcc atgcgtggat ggacgggccg
     4801 cgcccagctc tgcccccacc cgggcggaac cgatggcgcc cggccatgcg ccgtcagggc
     4861 tgtacggttg tgtcgtgggt gtccagatag tcggcaatct cggtcagcac cgtggaaagg
     4921 tctggtgcgg gcaggcggtt cctgcgcagg aacgcgcgcc actgagcctg cttctgggta
     4981 tctgcggcaa atgcctgggt cagcccatag ggcagaggtg gcggcgcagg ggtgccgcgt
     5041 cgatcaaacg tcgcctctat ggcggctgcg aggctggtgc gatccatggc gtcctcacgt
     5101 accagtgcca gcaggtcgaa gaagtccttc atcctgctgt tggcaatacc cagcgcggca
     5161 atggcctcca gcttctcggc gaacaccgtt tcgcgcggat agacgcgcag gcagggggcg
     5221 ggaagttcat ccagcatgac cggatagatg atctccggcg gcggagggat caccgcgtcg
     5281 ccgaacccta cgtcccattg cacatggcag cgtgcacggc ccagataggc caccagacgc
     5341 atgcgcaggc cctcgtatgc cgcctcttcg cgggtggcgt cgagggtgat ggtctctgga
     5401 tcgaagcgga gcccgtcatt acccggcatt gcgcagagcg agtgcgtgat gtgcagcagg
     5461 tggcgtggct cagtgcttcc gaatcccagg aaatcggcat cccgtgtagg ccggtgcggc
     5521 gcatcgaacc atgccgcgaa cagcatggcg cctttcagca ggaactggtc gcggaacgtg
     5581 gaggtggaaa gccggtagag caggcgttca acggcgaacc tgtccagcac gaactggaag
     5641 tcgtcgccgc gagtgcgcgc gtgatcgagc agtcgctgcc ggatcgaggc cacgcggtgg
     5701 ggaagaggaa gcagggaaga ggggggcacg ccagggcatc gatatacggt ctcatcagtc
     5761 tggcaacgcg ggagagccgt gcatatttca tcaacgcatc cggggtggtg gcgcggttgc
     5821 caagcgcgtc acgcagggcc tcgattgcga catcgagacc cacgagattg cggaatttga
     5881 agcagtcggc gacggttttc gcaacgttgc tgacgtatac gcggcgtgcg cctacgcggc
     5941 gctcttccag ccccgcctgg agggtcgttg ccgacatgcg caccacgcgt agtggcggcc
     6001 agtcgatccg gggcggtcgg tcgctgttgc cgatggccac ccacagttca aacggtgcct
     6061 gggtggtcag gccatgcaga cgcagggcgc tcaacaggca gaggcggacc ttcggcatgc
     6121 gctctgcaat gatccgcagc ccttcatcgg cctcgccgtt gtcgctgccc ggcagcgcgt
     6181 agacgccgcg cgacaaccgg atcagcgcgc cggcctcgac cagacgggac agctggacgc
     6241 gggcgatgcc tgcggcgacc agttcgcggg cgcgcaggct gcctgcacgc cgcagcagtt
     6301 ttcgggcctt ggcctcgacg tccgtcatgc aggtattgtt ccataatgtc ggtcggtttg
     6361 aatatcgacc gacaaaatgg aacatcaccg tctgttgcgg gtggatcgtg cggaccgaag
     6421 tgcgcaggca gctgaatcgg aagggtggcg cgcggtggtg ttggcatttg cgctagaatg
     6481 cgcgctggcg gagccggcca gacagtcgcg tcatcccttc gggggtgccg aggaaagtcc
     6541 gggctccata gggcaaggtg ccaggtaacg cctgggcggc gaaagccgac ggaaagtgca
     6601 acagaaagat accgcctacg tcttcttcgg aaggccggta agggtgaaat ggtgcggtaa
     6661 gagcgcaccg cgagtctggc aacagaccgg cacggcaaac cccacctgga gcaagaccaa
     6721 atagggatcc tttggcgcgg cccgcgttgg atccgggtag gttgcttgag cgttgcggtg
     6781 acgtaacgcc tagaggaatg actgtccacg acagaacccg gcttatcggc cggctccgcc
     6841 tccttcttct atatgcatga accgcgcatc ggtagtgccc ggcggaaatg aactgcgaga
     6901 agcgctcgca ccacactacg accgtggtgt agtcgtccac gttgacgtca tcaggtacat
     6961 cgaccaggaa acggttgaag gtcttcacct cgccgatgcg ccgggactgt gccttgacct
     7021 tcaggaagtc ggccttgttg tcgacgaacc cgtgtaccag gtagaccttg tagtccggcc
     7081 ccggccccat ctttccgtcg aaggccacct gggtggggct gacgctgacc ttgccttcag
     7141 cccagtgcac cgcatcgctg cccttgaggt cgcgccggaa ggtggtgtgg taggcggcct
     7201 tgcccatggc gtcctgcacc agcgcggcag gcggatcgtc gggggcgatc aggatcggca
     7261 gcaggtagac gcccaggcca aagccgaggc cgagggtgag caggtgggtg gcagcaagaa
     7321 caagaacacg acgcatcgaa gactccctgt ggatcggtcg ggtgcgcggc aggaccgcgc
     7381 ccagtcatcg tgtggcgtgc aggcagacat ttatagacac agaaaacggg tacagggtca
     7441 gaagtcgacg cggctctggc cgagtgcgac gccctgcggg ccgaaacggc actcgtggat
     7501 ctcgccgtgg ccgtcggcat cgatcaacag cacggtgctg gcgcgggtgc cgtagtcgtc
     7561 gccgcggatg aaggccgggc tcagccagcg ttcgcgttcc aggccgatgc cggtatcggg
     7621 cagctcgccg tcggcggggc ggtgttcgtc ggccagcgcg gtccacagcg gggccagctc
     7681 gccatcgccg gactgcagcc aggccgacag ggccgccatc agccgccggg tcttgggcca
     7741 gggggcatcc agcgcgccgt tggacatgcc gtgtacgccg gggcccaggg tctgccgctc
     7801 ggccgggtgg ttgcccaggt actccaggct gttgccgtcg gccagcagca ggttgaacgg
     7861 ggcataggcg ccggccacgg ccgccaggcg gtcgatgtgc acggcggccg ggtcgcggcc
     7921 gcgcaggaag tcggccacca gcgcgccgcg cgacgggccg gtctgggcgg ccagcggatc
     7981 gcggacattg gtgaccaccg ccatccggcc cgcggcaccc accccggccc agccgccacc
     8041 ggagcgcagg tcgcgtccgc cgatgacgga ggtctcatct tgccaggggg ccagcgccgc
     8101 cgtcgggcgg gcgtggaact catcacggtt gccggtcatc accagccgcc agcgcgggtg
     8161 gtgcatccag ccaagagcga gcaggcacat ggcgtcattg tgcacggttt gcgcagtccg
     8221 gcgccgtttt tggcccgctc tggatgaatg cgcggccgat gtttcacgcc ctgtccacac
     8281 ccctgaactt ccgttcaatc tcaaaaattg agacggatca gcaacttgtg gataagcctt
     8341 gaacaattct ctaaaggttg ttgcaagcca ttgatgcggc tggcgatttc cctgctgaaa
     8401 agttgttgac aaccctcggc ccgctgctaa ggtgggcatc agagggaaat ccgggtgttt
     8461 tgtgggtttt cgtggttcaa tgtttcaccg ggcgaaggat aggtgcacgc gtcgtgttcc
     8521 agggcgagac ggccatcaca gttgacgata aagggcgcat ggcggttccc accgcttacc
     8581 gcgacctcgt cgcgcgcgcc agcaacaacc gtctcgtact gacctacaac ccgttcgaag
     8641 ccggctgcct gtggctgtac gcagagtcgg aatgggagcg ggtccgcgac gatgtgatgt
     8701 ccaagcccaa cacccagcgc gtcgtgcgcc tgttgcagca gaagctggtc ggctcggccg
     8761 cccatctgga gctggacggc aacggtcgca tcagcatccc cgccagccac cgcggtgcgg
     8821 tgggcattga gaagaaggcg gtattgctcg gtatgggcga caagttcgaa ttgtggagcg
     8881 agcaggcgca tcgggccctg atccagcaga cgttgtctga cgaggatctg ggtgatgggt
     8941 tgctcgacct gaagttgtga gccggggtgc ccggatgcgc ccagaagcgc agaccggtca
     9001 ccttccggtg tcgcagtcgc cggcggtgca cctgccggtc ctgtacaccc aggtccttga
     9061 aggcctgagg gtgatcgaaa acggacgtta tctggatggc acgttcggtc gtggcggtca
     9121 tgcacgtggc gtgctcaccc agttgggtcc cgaggggcgc ctgctggtca tggacaagga
     9181 tccggaagcc atcgccgtag ccgagcgcga tttcgcgccg gacccgcgcg tgtccatctt
     9241 ccgtggcagc ttcgcccagc tgctgcagtg ggatgcgacg gccgacggcc tggacggcgt
     9301 gctgttcgac ctgggcgtgt cgtcgccgca gctggacgtg gccgagcgtg gtttcagctt
     9361 cggcaaggac ggcccgctgg acatgcgcat ggacccggac agcggcgaaa gcgccgcgca
     9421 gtggatcaac cgcgtcgaag accgcgagat cgccgatgtg ctgtggacct acggcgaaga
     9481 gcgccagagc cgccgcatcg cgcgtgccat cgtggcccgc cgcgagaagc agccgttcac
     9541 ccgcaccgcc gaactggccg agctgatcgc ctcggtgatg ccacgtggaa aggacaagat
     9601 ccacccggcc acgcgcagct tccaggccat ccgcatccac atcaaccgcg agctggccga
     9661 tctggaagcc ggcctcgatg cggcggtgga acggctcaag cccggtggcc gcctggcgat
     9721 catcagcttc cattcgctgg aagaccgcat cgtcaagcag tacatgaacc gcctggccaa
     9781 ggcgccgccg gccaaccgcc gcctgcccga ggcggaggtg ttcgtgccca ccctggatct
     9841 gatcggcggc gccatcaagg ccaccgacga agagctggcg gccaacccgc gtgcccgcag
     9901 cgccgtgctg cgcgtggccc agaagcggga ggccgatgca tgagccggct gctgctgatc
     9961 atcctgttgg cctcgaccgt ggcctcggcg atcggcgtcg tgttcgtgcg tcaccgtcac
    10021 cggcagacgt tcatcgagct gtcgcgcgcc gagcgcaagc gcgatgacat caacctggag
    10081 ttcggccgcc tgcagctgga acaggccacc ctggccgaag ccaaccgtgt cgatcgcatc
    10141 gcccgcgaaa agctcggcat gaagttcccc gaggccgccg atatcgtggt ggtgcggcca
    10201 tgagcaagac cggccgcaac cgcccgcgca acgccttcaa cctgcgccag cgcctgcgct
    10261 gggtcgcgct ggcgctgggc ctgtgctcgg tgtcgctggt cggtcgtgcc gcctacgtgc
    10321 agatcatcaa cagcgacttc taccagcgcc agggcgaggc ccgttatctg cgcgagctgc
    10381 cgatcaagac ctcgcgcggc atgatcaccg accgcaacgg cgaaccgctg gcggtgtcca
    10441 cgccggttgc ctcgatctgg gtcaacccgc aggacctgct gcgttcgccc gagcgcatcc
    10501 ccgagctggc ccaggcggtc ggcatgtcgg tggatgagct gagcagccgc ctgtcgcaga
    10561 agtcggacaa ggaattcatg tacctgcgcc gccggatcaa tccggacgag gcagagaagg
    10621 tggtcgcgct gaagattccg ggcgtggccg cgcagcgcga gttccgccgc ttctacccgc
    10681 agggtgaggc gatggcgcac gtgctgggct tcaccaacat cgacgaccgc ggccaggaag
    10741 gcctggagct ggcgttcgac gaatggctgc gcggcaaggc cggcgccaag cgggtgatcc
    10801 gcaaccgcaa gggcgagacc gtcgagagcg atctgctgcg cgccgccgaa cccggcaagg
    10861 acctgaccct cagcatcgac cgccgcatcc agtacctggc cttcaaggaa ctgcgcaacg
    10921 cgctggtggc caacaaggcg gccggcggtt cgatggtgat catggatgtg accaccggcg
    10981 agatcctggc catggtcaac ctgccgacct acaacccgaa ttcgctgacc ggcgcactgc
    11041 ccgatgcgcg ccgcaaccgt gcggtgaccg acctggtcga gccgggttcg acgatgaagc
    11101 cgctgaccat cgccaccgca ctgcaggccg gtgcggtgac caaggacacc atcatcgaca
    11161 ccaacccggg ttacatgacc ctgggccgct tcaccatccg cgacgtgccg cgcaacaacg
    11221 gcgtgctgaa cgtgaccggc gtgatcaccc gcagttcgaa cgtgggtgcg gccaaggtcg
    11281 cggcgaagat gccggaccag gtgttctacg acggcgtgcg ccgcttcggt tatggctcgg
    11341 tgccgcacag cggtttcccg ggtgaatccg gcggcgtggt gctgcgcccg gcgcgctggt
    11401 cgggcaccac caagaccacc atgtcctacg gctacggcct gaacgtcacc ccgctgcaga
    11461 tcgccaccgc ctactcggcg ctggccaacg gcggtcgcct gatcgcgccg accttcgtca
    11521 agggccagcg caacgaaggc cagcagatca tcgacgagaa cgtcgccaag caggtggtgg
    11581 cgatgatgga aacggtggtg acccagggcg gcgccaagca ggcggcggtg ctgggctacc
    11641 gcgtggccgg caagaccggt accgcgcgca aggccggccc cggcggttac gagcgcggcc
    11701 actacaacgc gctgttcgcc ggcgtggtgc cggccaccaa cccgcgtttc gccaccgtca
    11761 tcgtcatcaa cgacccgcag gccggcaagt tctacggcgg cctggtgtcg gcgccggtct
    11821 atcacaacgt gatggaaggc acgctgcgcc tgatggacgt gccgctggat gacctgcagt
    11881 cgtggctggc cgcccagcag tccggcaagg tcggccattc ggcttcgatc ctgcctgcgc
    11941 cgccggccga agctgcactg ccggtggatg ccgccgctga attcgatgct gcgctgccga
    12001 gcgcgcatgc ccagacgccg cccgctacgg gaggcacgca atgagtcctt cgatgttgct
    12061 ttcgcagttg cttccggacg tggccctggc gggccatgac cccgttctga ccggcctggt
    12121 gctggacagc cgcgccgtgc gccccggtaa tgccttcgtt gccatcgccg ggttcggcgc
    12181 gcatggcctg ggctttgtcg agcaggcccg cgcggccggt gccagcgcca tcctgttcga
    12241 accgccggcg cctgccgagc tgccggcccc ggccgatgcg atcgccgtgc cgggcctgcg
    12301 cgcgcgcatg ggtgcgatgg ccgaccagtt ccatggcgcg ccgtcgcggg cgatggcgat
    12361 ggtcggcgtg accggcacca acggcaagac ctccaccgtg cagctgctgg cccaggcctg
    12421 gcacctgctc ggtacgccca gtggcagtat cggcacgctg ggtgccggac tttatggtgc
    12481 ggtcgaaccg accggcttca ccacgccgct ggtgctgcag atgcatgcgc tgctggccca
    12541 gctgcgcgac gccggtgcac gcgcggtggc gatggaagtc agctcgcatg cgctggacca
    12601 gggccgcgtg gatgccgtgc actatgacgt ggcggtgttc accaacctca cccgcgacca
    12661 tctggactac cacggcgaca tggccagcta cggcgcggcc aaggcgcggc tgtttcatcg
    12721 cccgggcctg aaggccgcag tggtcaacct ggacgatgcg tttggtcgcc agctgtttgc
    12781 cggcctgccg gcgagcgtgc agccgatcgg cctgagctcg cgcggtgcca ccgacgccag
    12841 cgtgcgcgcc gaagcgctgc agctggacgg ccgtggcatc gccttcgaac tggtcatcga
    12901 cggccagcgt gccgcggtgc agtcgccgct gctgggccgc ttcaacgtgg acaacctgct
    12961 ggccgtggcc ggcaccctgc acgcgcaggg ccagccactg ccgcgcatcg ccgaagtgct
    13021 gtcggcactg cagccgatcc gtggccgcat gaaccgcctg ggcggcgaag acggcctgcc
    13081 gaccgtggtg gtcgattacg cgcatacccc ggatgcactg gaacaggcgc tggacagcct
    13141 gcacggccac ctgcatggcg cgctgttctg cgtgttcggc tgcggtggcg agcgcgatac
    13201 cggcaagcgc ccgcagatgg ccgccattgc cgagcgcctg gccaaccagg tcatcgtcac
    13261 cgacgacaac ccgcgtggcg aggacggcga cgtgatcgtg gccgacatcc tggccggctt
    13321 ccagaatgcc gatgccgtga ccgtgcagcg cagccgcgcg cgtgcgatcg gcctggcggt
    13381 gaagcgtgcc ggtgccggtg acatcatcct gatcgccggc aagggccacg agccgtacca
    13441 ggaggtcaat ggcgttcgcc atgacttcga cgacaccgaa gtggctgccg ctgcgttggc
    13501 tgccaaggct ggcgtgttgg ccgcgcaggc cggggagggc atcgcatgaa gcgcaccctg
    13561 ctttcgctga tcgcgcactg ggccggcggt gagatccatg gcgacgacgt ggccatcgat
    13621 gcggtcagca atgacacccg cagcctcggc ccgggcagcc tgtacgtggc actgcgcggt
    13681 gagcgtttcg acggtcatga cttcgccacc gacgcgcagg cgcgcggcgc cagtgccctg
    13741 ctggtcgagc ggctgctgcc gatcgagctg ccgcaggtgc tggtggccga cagcgagctg
    13801 gcgctggcga agatcgccac cggcatgcag cgcgaccgcg acaccgaggt gttcgcgatt
    13861 accggcagca atggcaagac cagcgtgaag agcctgctgc tgtcgatcct gcagcaagtg
    13921 gcgcagcacg cgcataaagt ggtctacgcc aacccgggca accgcaacaa cgagatcggc
    13981 ctgccgctgg cggtgatcga cgcgccggaa gatgccgact acgccgtcta cgagatgggc
    14041 gccggcaagc cgggcgacat cgcctacctg accgatatcg cccgcccgcg ctacgcgctg
    14101 gtcaacaaca tcgcaccggc ccatctggag cggatgggca gcctgctcgg cgtggccgtc
    14161 accaagggcg cgatctacgc ggcgctgccg gccgatggcg tggcggtgat caacgtcgac
    14221 gatgcctacg gccgctggtt cgaacagcat ttcgtcggca cgccggcgcg ctgccgtgtg
    14281 ctgcgctacg gcctggaaca caccgccgac atcaccgcgc gcgacatccg cgccggtgcc
    14341 cagggcagcc agttcaccct ggtttcgccg atgggcgaag cccgcgtggt gctgggcctg
    14401 ccgggccgcc acaacgtcag caatgcgctg gccgcggcca gcctggcgct ggctgccggt
    14461 gtcgacctgg cgctgatcgc ggctggcctg gccgaggcgc agccggtgcc gggccgccag
    14521 atcgcccacc agctgcgcaa cggcgcggtg ctggtggatg acagctacaa cgccaaccct
    14581 ggttcgctgg ccgccgccat cgatgccctg gccgctgccc cggaagaggg ctggctggtg
    14641 ctgggcgaca tgcgcgagct gggcccggat gccgaggcgc tgcatgcgca ggccggcctg
    14701 cgcgcacgtg cctccggcct caagcgcctg tacgcgctgg gtccgctcag cgccgctgct
    14761 gccgccgcct tcggcgaggg cggccgtcat ttcaccaccc atgacgcgct gtcgcaggcg
    14821 ctgaaggacg agctgcacgc cggcgtgcgc tgcctggtca agggttcccg tggcagcgcc
    14881 atggacacga ttgtcaaagc gctgctggcg caaggagagg aatccccgca tgttgtatga
    14941 actggctcga tggttgcagc agttggagag cctgttcggg ctgttcaact accagacgtt
    15001 ccgcgccatc cttgccgcgc tgacggccct gttcctgtcg ctgtggctcg gcccggcgat
    15061 gatccgcaag cttgcccagt tcaagggcgg ccagccgatc cgcaaggacg gtccgcagac
    15121 ccatttctcc aaggccggca cgccgaccat gggcggttcg ctgatcctgc tcaccatcac
    15181 cctgtcggtg ctgatgtggg ccgatctgcg caaccgctac gtgtggctgg tgctggcagt
    15241 gatgctgtgc ttcggcgcca tcggctggta tgacgactgg atcaagatcg tccgtcgcga
    15301 cccgaacggc ctgaagtcgc gctggaagta cctgctgcag tcgatcttcg gcctggctgc
    15361 gggcgtgttc ctgttctata cggccgacgt gccggccgcg ctgaccttct acatcccgat
    15421 gttcaagtcg gtggcgctgc cgctggccgg catcggcttc gtggccatcg cctacttctg
    15481 gatcgtcggc ttctccaacg cggtgaacct gaccgatggc ctggacggcc tggcgatcat
    15541 gccgaccgtg ctggtggcct gcgcgctggg tgtgttcgcc tatgcctcgg gcaacgtggt
    15601 gttcgccaac tacctgcaga tcccgcagat tccgggtgcc ggcgagctgg tcatcatctg
    15661 cgcggccatc gctggcgcgg gcctgggctt cctgtggttc aacacctatc cggccatggt
    15721 gttcatgggc gacatcggcg cgctggcgct gggtgcggtg ctgggcacga tcgcagtgat
    15781 cacccgccag gaactggtgc tggtgatcat gggcggtgtg ttcgtgatcg aaacgctgtc
    15841 ggtgatgatc caggtcgcct cgttcaagct gaccggcaag cgcgtgttcc gcatggcgcc
    15901 gatccaccac catttcgaac tgaagggctg gcccgagccg cgcgtgattg tgcgcttctg
    15961 gatcatctcc gtcgtgctcg tgctgatcgg cctggccacg ttgaaggtgc gctgagatga
    16021 acgacctgtc ccgccaggca acacgccttg aagccatcga aggcagctac gacaagtggc
    16081 tgctgggcgc gatcatcgcg ctcaccggtg tgggcgtggt gatggtggcg tccagctcga
    16141 tcgccttgat gagcagcccg ttctactacc tcaaccgcca cctgatcttc ctggcggtcg
    16201 gcatcgtgct ggcggtgatt gccgcgcgca ccgagctgaa gtcgatcgag cagtacaacc
    16261 agatgctgct gctgggctgc ttcgtgctgc tgctggcagt gttcacgccg ggcctgggca
    16321 gcacggtcaa cggcgcgcgc cgctggatca acctgggcat ctccaagttc cagacggttg
    16381 aggcggtgaa ggtgctgtac atcgtctggc tgtccagcta cctggtgcgc ttccgcgacg
    16441 aggtcaacgc gacctggccg gcgatgctca agccgctggg cgtggccggt gcgctggtgg
    16501 tgctgctgct gctgcagcca gacttcggtt cctcgaccct gctgctggcg atcaccgccg
    16561 gcatgctggt gctgggcggg gtcaacatgc cgcgcatgtc gatgccggtg atcatcggcc
    16621 tggtcggcat gagcgcgctg gcgatcatcg agccgtaccg catgcgccgc atcacctcct
    16681 tcctggaccc gtgggccgac cagcagggtg acggctacca gctgtccaac gcgctgatgg
    16741 cggtcggccg tggcgagtgg accggcgtcg gcctgggcaa ttcggtgcag aagctgtact
    16801 acctgcccga agcgcacacc gacttcatct tctcggtcac cgccgaggaa ttcggcttcc
    16861 tgggcacctg cgtgatcgtg gccctgtatg cgctgctggt cggccgcacc ttctggctgg
    16921 gcatgcgctg cgtggaaatg aagcgccact tctccggata catcgccttc ggcatcggcc
    16981 tgtggatcag catgcagacc ttcgtctcga tcggcgtgaa cctgggcatc ctgccgacca
    17041 agggcctgac cctgccgctg atctcctccg gcggttcgtc ggtgctgatg acctgcgtgg
    17101 cgatgggcct gctgctgcgc gtgtcctatg aactcaagcg cgccgagcgc cgccaggccg
    17161 tgcgtatcgg tggcggcgac gacgcggctg ccgagccgca ggatgcgccg gtcgcgccgg
    17221 cagcagccca tgtgccgatg agcgcagagc cggtggctgc agcgacggcg aacgctgcgc
    17281 gtggcaccag ccgcctgcag tcgcgcgtcg aaccgacctt cgggaggctg tcatgagcgc
    17341 agcccacgac actgcacgcc cggtgatgat cctggccggc ggtaccggtg gccacatctt
    17401 ccccggcctg gccgtggccc gcgtgctgcg cgagcgtggc gtgccggtca cctggatggg
    17461 tgccgacggt gcgatggaaa cccgcctggt gccgcagcac gacatcgcca tcgacacgct
    17521 ggcgatcacc ggcctgcgtg gcaagggcaa gctggccctg ctggcggcgc catggcggct
    17581 gatgcgcgcg ctgcgcgcgg ccggcatgat catccgcaag cgccagccgc gtgcggtggt
    17641 ggccttcggt ggcttcgcct ccggccccgg cggcatggcc acgcgcctgc acggcctgcc
    17701 gctgatcgtg catgagcaga accgcgcacc gggcctgacc aaccgcatcc tgtcgcgcta
    17761 tgcgcgccgc ctgctgaccg gcttccccgg caccttcgcc aagcgcgagg aattcgtcgg
    17821 caacccggtg cgtgcggaaa tcgccgccat cgcaccgccg gaacagcgct tcgccgaccg
    17881 ccacggtccg ctgcgcgtgc tggtggtcgg cggcagccag ggcgcacgtg cactcaacac
    17941 cggtgtgccg caggcgattg ccgcgctggg cgcggacctg ccggtgcagg tgcgccacca
    18001 gagtggcgag aagatgcatg ccgaggcggt cgaggcgtat gccaaggccg gcgtgcaggc
    18061 tgaaatcacc ccgttcatcg ccgacatggc cgacgcgttc gcctgggccg atctggtcgt
    18121 gtgccgtgcc ggcgcgtcga ccctggccga gctgtgcgcg gtcggtgtcg gcagcgtgct
    18181 ggtgccattc cccgccgccg tcgacgatca ccagacccgc aatgcggaat acctggttga
    18241 gcgcggcgcg gcggttttgc tgaagcagga cggaacgctg gccgacggca ttgccgcact
    18301 gctgcgtgat ctgtccgaaa atcccgcccg ccgcatgcag atggcgcaag ccgcgcgtgc
    18361 cctggccaag gtcgatgccg ccgagcgcat cgccgatatc attcttgagg aagctgtatg
    18421 aagaaggcat gccaccgcgc ctgccctgcg cgaggccgcg catgatccgt cgcctgcacg
    18481 acaccaacga cctggtgcgc gccttcccgc gcgtgcattt cgtcggcatc ggcggcaccg
    18541 gcatgagcgg tatcgccgaa gtgatgctga cgctgggcta tgaagtgtcc ggctcggaca
    18601 acgccgacaa cggcgcgacc cgccgcctgg ccggcctggg tgcgcgcatc atgcgcggcc
    18661 actcggcggc caatgtgctg ggcaccgact gcgtggtggt atcgagcgcg atccgcgagg
    18721 acaacccgga actgatggag gcgcgtagcc agcgcattcc gatcatgccg cgcgcggcga
    18781 tgctggccga gctgatgcgt ttccgccgcg gcatcgccgt ggccggcacg cacggcaaga
    18841 ccaccaccac cagcctgacc gctgcggtgc tgagcgaagg tggcctggac ccgaccttcg
    18901 tgatcggtgg ccagctgctg gccgccggtg ccaacgccaa gctgggtggt ggccagtggc
    18961 tggtggccga ggccgacgaa agcgatggca gcttcctgcg cctgaacccg ctgatgtcga
    19021 tcatcaccaa cattgatgcc gatcatctgg agaactacgg caacgacttc gcccgcgtgc
    19081 aggcggcgtt cgccgagttc ctgcagcgcc tgccgttcta cggcctggcg gtgctgtgca
    19141 tcgatgaccc ggaagtggct gcactggccg ccaagacccc gcgccacgtg atgagctacg
    19201 gcatgagccc gcaggccgac gtgcgcgccg agaacgtggt gcaggaaggg tcgcgcatgc
    19261 gcttcaccct gcgcctgccg cagggcacca gccaggaagt ggtgctggcg ctgccgggca
    19321 ggcacaacgt gctgaacgcg ctggccgccg ctgcggttgg ctggcagctg ggcgtggccc
    19381 cggacgccat cgcacgcgcg ctggaagcat tcgccggtgt cggccgtcgc ttcaacgatc
    19441 tgggcgaagt gaccaccgcc agcggtgcca aggtgcgcat catcgacgac tacggccatc
    19501 acccgagcga gctggaagcg gtgttcgccg ccgcccgcgg tggctgggcc gacaagcgcc
    19561 tggtggtggc cttccagccg caccgttaca gccgtacccg cgaccagttc gacaagttcg
    19621 ccgcggtgct gtccagcgtc gatgcgctgg tgctgagcga ggtctacccg gccggcgaag
    19681 agccgattgc cggcgccgat tcgcatgcgc tggcgcgcgc catccgtgcg cgcggccgca
    19741 gcgagccggt ggtggtgggc aaggcggccg aactggccag cgtgctgccg gacgtactgc
    19801 aggacggtga cctgctgctg atgatggggg ccggcgacat cggcgccgtg gccagccaca
    19861 tcgccgtgga agggttcaag gcggagggcg aggcgtgagc acgctgacct tcccgccgct
    19921 gcgcgtgacc gacccggccg tgttcggccg cgtcgccgtg ctgctcggtg gcagttccag
    19981 cgaacgcgag gtgtcgctgg actccggccg caacgtgctt gaagcgctgc aggcgcgcgg
    20041 catcgatgcg ttcgccgtgg acggcatccc ggcgctggcc aaggtgctgg ccgccggcgg
    20101 tgtcgaccgc gtgttcaaca tcctgcacgg ccacaacggt ggcggtgagg atggcatcgt
    20161 gcagggcctg atggacgcct tcggcgtgcc gtacaccggc tcgaacgtgc tgggttcggc
    20221 gctgagcatg gacaagatcc gcaccaagca ggtgtggctg tcgctgggcc tgccgacccc
    20281 gcagtacagg aaggtggatt cctccacggt gcatgcgctg gccgccgaac tgggtctgcc
    20341 ggtggtggtg aagcctgcca atgaaggctc cagcgtgggc atcagccggg tcaccgacga
    20401 ggccggcctg gacgacgcgg tggccctggc cgcgcgctac gacggccagc tgctgatgga
    20461 acagatggtg gtcggcgacg agctgaccgt ggccatcctc ggcgacgtgg cgctgccgtc
    20521 gatccggatc gtgcccaagg gccagtggta cgactacaac gccaagtaca tcgccgagga
    20581 cacccagtac ctgtgcccgg gcctggacgg tgctgacgaa gacgagatcc gccgcatcgc
    20641 gctggctgca ttccgcgccg ccggctgccg cggctggggc cgcgtggacg tgatgcgcga
    20701 ccgtgccagc ggccgcttct tcctgctgga agtgaacacc gcaccgggca tgaccagcca
    20761 ctcgctggtg cccaaggcgg ccgcacaggc cggcatcggt ttcgaggaac tggtgtggcg
    20821 cgtgctggaa cagaccctgg aggccccgca cgcatgaacg cggtgctgcg catcttcgtc
    20881 tggctgttgg cgctgtcggt ggttgcactg ccggtggtgg ccgtggtcaa tggctgggtc
    20941 ggcgccgagc gctggccgct ggcgaagctg cgcgtgcacg gtgagttcaa gcgggtgccg
    21001 gccgaacagc tgcagcaggt gctgctgccg tatgcgcatg ccggtttctt cgcggtcaag
    21061 ctgcaggacg cgcaggacgc cctggaaaaa ctgccgtggg tggaaagcgc gcaggtgcgc
    21121 aagcagtggc cggacgtgct ggaagtgacc ctggtcgagc acaagccgtt cgcgcgctgg
    21181 ggcaacgacc gcctggtctc cgagcagggc aagttgttcc ccacgccgaa gaagctggcc
    21241 gacctggcgc tgcccgaact ggacggcccg gacagccaga ccgaagaagt gatgaagctg
    21301 tacagcgact cgcgtgcatt gttcgcaccg gccggcgtcg atgtgcgccg ggtgacgatg
    21361 gatgcgcgtg gcagctggtc gctggtgctg agcaacggca ctgaagtggt ggtcggccgt
    21421 gacgacgcgc gctcgcgcat gcagcgcttc gtcaaggtac tgccgcagct caaccgccag
    21481 gacgcgccga tcgagcgcgc cgacctccgt tacaccaatg gtttcacgct gagctggggt
    21541 accccggcca cgccggcgaa aacgccggcg accccggcca gcaggacgca ggaaaggaca
    21601 tgaatcgcaa gggtgacaaa tcgctgatcg ttggcctgga catcggcacc tccaaggtgg
    21661 tggcgctggt gggcgagtat tcgccgggca acccgatcga agtgatcggc atcggctcgc
    21721 acgagtcgcg cgggctcaag cgcggcgtgg tggtggatat cgaatcgacc gtgcagtcga
    21781 tccagcgcgc ggtggaagag gccgagctga tggccggctg cgagatccgc tcggtgtacg
    21841 cctcgatctc cggcaaccac gtgcagtgca agaactcgcc gggcatcgtg ccgatccgcg
    21901 acggtgaagt gacctggggc gacctggatc gcgtgctgga cgcggccaag gcggtggcga
    21961 tcccggccga ccagaagatc ctgcatgcga ttccgcgcga gtacgtgctg gacgattcgc
    22021 aggaaggcat ccgcaacccg gtcggcatga ccggcgtacg cctggaagtg cacgcccacc
    22081 tggtggtgtg cgcgcagtcg gccgcggcca acatcagcaa gtgcgtgcag cgctgcggtc
    22141 tgcaggtgga cgacctggtg ctgtcctcgc tggcctccag cgtggcggtg ctgaccgccg
    22201 atgagcgcga gctgggcgtg gtgctggtcg acatgggcgc cggcaccacc gacatcgcgg
    22261 tgttcgtgca gggcgcgatc tgccacaccg cctcgctgcc gatcgccggc gaccacgtga
    22321 ccaacgacat cgcgcacatg ctgcgcacgc cgaccccgga agccgagcag atcaaggtgc
    22381 gctatgcctg cgcgctggcc cagctggcca ccgccgagga aagcatccag gtgccgtcgg
    22441 tgggcgaccg cccgccgcgc cgcatgccgc gccattcgct ggcgcaggcg gtgcagggcc
    22501 gctacgagga aatcttcgag atggtgcagg ccgaactgcg ccgctccggc ttcgaggaac
    22561 tggtgcgcgc cggcatggtg ctgaccggtg gcgcttcgaa gatggaaggc gtggtcgagc
    22621 tggccgagga aatgctgcag atgccggtgc gcgtgggcat tccgcagcac gtcaccgggc
    22681 ttggcgaagt ggtcggcaac ccggtgcatg ccaccggcgt gggcctgctg ctgatgggca
    22741 gccagatcga gcatccgcgg cgtccgtcgc tgccgaccgg ccgcgccgga agcatgttca
    22801 agaaactcaa gacctggttc cgcggcgagt tctgacgcgg aatccgcaag accgggcctc
    22861 gcccgggcgc aacacccgca gtacccgcat cacaacgcaa caccggcaac acacaaccca
    22921 cacagccgca acgccggcat gcagcaggag ggcaggacgc ccgaatgccc atgccagccg
    22981 aagcggatac aacgaggaca cggacatggc gcattttgaa ctgatcgaaa agatggcacc
    23041 caatgcggtg atcaaggtgg ttggcgtggg cggcggcggc ggcaatgccg tggcgcacat
    23101 ggtcaactcg gcagtggatg gcgtggaatt catcaccgcc aacaccgact cgcaggccat
    23161 caagaattgc ggtgccaagc tgcagctgca gctgggtacc aacgtgacca agggcctggg
    23221 cgcaggcgcg aacccggaag tcggccgcca ggccgcgctg gaagatcgtg agcgcatcat
    23281 ggacgcgctg cagggtgcgg acatggtgtt catcaccgcc ggcatgggcg gcggcaccgg
    23341 taccggcgct gcgccggtgg tggcacagct ggccaaggaa atgggcatcc tgaccgtggc
    23401 cgtggtcacc aagccgttcc cgttcgaagg ccgtcgccgc atgcaggtgg cgctgaaggg
    23461 catcgaggag ctgagccagc actgcgactc gctgatcacc atccccaacg aaaagctgat
    23521 caccgtgctg ggccgcaacg cgaccatgat ccaggccttc cgtgccgcca acgacgtgct
    23581 gcagggcgcc gtgcagggca tcgccgacct gatcgtgcgt ccgggcctga tcaacgtcga
    23641 cttcgccgac gtgcgcaccg tcatgtccga aatgggcctg gcgatgatgg gcaccggtac
    23701 cgcccgcggc gatgaccgcg cgcaggccgc cgccgaatcg gcgatccaga acccgctgct
    23761 ggacgacgtg aacctggccg gtgccaacgg catcctggtc aacatcaccg ccggcgccga
    23821 cttcaccatg gccgagttcg acgagatcgg ccgcaccatc gatggcttcg cttccgaaga
    23881 cgccaccgtg gtggtcggca ccgtgctcga tccggacatg caggacgaag tgcgcgtgac
    23941 cgtggtcgcc accggcctga accgcgtctc ggccagcaag acccagcgcc cgggcgagcg
    24001 tgcaccgatc aagctggtgc gcaatgcgac caccggccag ccggagttcg gcgacttcga
    24061 caacggcggc gacgccgtgt ccaaggccgt cggcggcatg ggcctgggcc tgcgtcgtgc
    24121 cagcagcgat accgcagcgg cctccacccc gtcggcgccg gccgcttcgg ccccggcagc
    24181 ggcggaactg ccgaacgatt acctggacat cccggccttc ctgcgccgcc aggcggactg
    24241 agcggggtag cccggggctt gtcctccccg ggttgcgcca ccatgtcctg aaaacgcggg
    24301 cgccgggcca ggatgggccc ggccgccctg cttcacgccc gtcctactgg cgtgccggtg
    24361 tgtcctgccg gcctttcagc cagggtaggg gagcgtgcgt gttaatctaa tgtgtcactt
    24421 caggtccatc ccccatgatc cagcaacgca ccctcaagaa cacgatccgc gccaccggcg
    24481 ttggcctgca cagcggtgac aaggtctaca tgaccctgcg cccggcaccg gtcaaccatg
    24541 gcatcgtgtt ccgccgcgtg gacctggacc cggtggtgga agtgccggcc aaggccgaac
    24601 tggtcaccga agtgaccctg tgcaccggcc tgacctgcaa cgacgccaag atccagaccg
    24661 tcgaacacct gatgtcggca ttggccgggc tgggtgtgga caacatcatc gtcgaactgt
    24721 cctcggccga gctgccgatc atggacggtt cggccggccc gttcgtgttc ctgctgcagt
    24781 cggcgggcat cgtggaacag gatgcgccca agcgcttcat ccgcgtgctg aagaccgtgg
    24841 aagtgaccga gggcgacaag gtggcccgct tcaccccgta cgaggggtac aagctgggct
    24901 tcaccatcca gttcgaccac ccgatgatcc cggccaagca gtcgcgccag gaaatcgagt
    24961 tctcgacgct ggcctacacc aaggaaatct cccgcgcgcg caccttcggc ttcatgcgcg
    25021 acctggaata catgcgcgag cgcaacctgg gcctgggcgg ttcgatggac aacgccatcg
    25081 tgctggacga gttccgcgtg ctcaacgaag acggcctgcg ctacgccgac gagttcgtgc
    25141 gccacaagat cctcgacgcg atcggcgacc tctatctggc cggtggccag gtgctggggg
    25201 cctacgaggg cttcaagtcc ggccacgcac tcaacaacaa gctggtgcgc gcgctgatgg
    25261 ccgatgccac ggcctgggaa tgggtcagct tcgactcgcc ggcgaccccg gatccagtgg
    25321 aatacgccac tccggcctac gcctgattgc cgcaggttgt tgaattgaaa gacaaaaacg
    25381 ccgcctgaaa gggcggcgtt gtcgttcgtg gcggctgcgg cgtattcagc gtgcttgagg
    25441 tgcgtcaagc gcggttcgag gtcacggatt tgtgaacctg ttggatcgaa agcctgaatt
    25501 taacgaagtt ttaactccaa tctaacgaca ggcctccgga tggcagctag gatgcgaccc
    25561 ggcccccgaa atgtttcacg ccgtggtgac acgtgcgacg gggagcggag ccggatgctc
    25621 cgttgtcgtc aggaccgctt cttcggcttc gaaggaacgt cctgcaggca cgccaaggcg
    25681 tcgcgtagcc ctttgtgcgt ggcggctgaa actgcgtggg gtccattccg gttgtcgagc
    25741 gctggggagc gcgtgggagt gggagacgca gtcttgatgg tcaccctggt ggccttcagc
    25801 ccgatggaac gggccgcgtc gagcaactgg gcttcggcaa gccgcacctt ggcatgccag
    25861 accggggact cgacgagaaa aacgaggtgt tccccgtcca cattggccag ccggcaacgg
    25921 ctgcgcagag gtggcggcaa ctgggggcgc aactgacggt ccagcgcgtc gagccacaag
    25981 gcacgccgca gcgggttccc gcttttgtcc gccatcaccg catccagcgc cggtttcggc
    26041 actgacgcgg ggcgaacgct ggatttcggc tcagacatga aaactcactg atggcattca
    26101 aaaagatcgt aatcaaaacg cgtgaaggac aggccaaagc gtcgccgatc acgcgtttgc
    26161 ggttctattt cgaggaccgc ccccgcgccc tgctgggcag cgtgctcggg gtaggctgca
    26221 ttatcggcct tgccggcggc attggcgcca gcgcgctgaa tgattcccgg ctgcaggcca
    26281 aggtcgagcg ccaggatgcg gagctggcca aggtcaagcg cgatgcgcag acccaggtca
    26341 acgcgctggc ggcccgcctg ggcgagctgc aggcccaggc cacccgcctc aacgcccttg
    26401 gcgaacggct gacccagatg ggcaagctgg aagatggcga gttcgacttc aacgagaccc
    26461 cgggtctcgg tgacggcgat gccggcggcc cgaccagcga catcccggtc aaggacgtca
    26521 acgccgactt acaggtgctg gagcagcgct tcgctgcttc aggccgccag ttgtcggtga
    26581 tggaatcgct gatgttcgat caccagctgc agcagaacgc cgtgccctcg cgcatgccga
    26641 tccgcaacag ctacgtgacc tccggcttcg gcacccgcgc cgacccgttc ggccgcggtg
    26701 ccgctaccca caagggcatg gacttccacg ccagggtcgg cgacccggtg atggccgtgg
    26761 ccgaaggcgt ggtcagcttt gccggcgtga agggcggcta cggcaacgtg gtcgacgtcg
    26821 atcacggcaa cggctatgtc acccgctacg cgcacaattc gcgcctggtg gtgaaggccg
    26881 gtgacctggt ccgtgccggc caggaagtgg ccaaggccgg ttccaccggc cgttcgaccg
    26941 gtgcccacgt gcacttcgaa gtgtgggaga acggcaacgt ggtcaacccg cgcaagttcc
    27001 tcggcgacgg cggcaacacg ccggtcggcc gcatcagccg cggctgatcc ccggtatggg
    27061 gctggatccc ttccgcgacg gcgaaaggga ttcgacccag catccgtgat tctttgccga
    27121 atccggggcg atcacgaccg gatcggcgct tgaaacctca gccggccgtc ccaagctaca
    27181 atgggtgttg ccatcgacag ggcgccaggc gccctgtttc gtttgcggcg gacggatccc
    27241 aagggggagg ccgggcgtcg tgtccatcca acccggttcc ttcaatgatc aacagcctgc
    27301 ttacccgcgt atttggcagt cgtaacgaac gacagctgcg ccagctcaac cgcatcgtcg
    27361 ccaagatcaa tgcgctggag ccggagatcg agaagctttc cgacgagcag cttcaggcca
    27421 agacgccgga gttcaagcag cgcatcgccg gcggcgaagc cctggacaag gtgctgccgg
    27481 aagcgttcgc ggtctgccgc gaagccggcc gccgcgtgct gggcatgcgc cattacgacg
    27541 tgcagctgat cggcggcatg gtgcttcacc tgggcaagat cgcagaaatg cgcaccggtg
    27601 aaggcaagac cctggtggcg accctgccgg tgtacctcaa cgcgctggaa ggcaagggcg
    27661 tgcacgtggt caccgtgaac gactacctgg cccgccgcga tgccgcgcag atgggcaagc
    27721 tgtacaactg gctgggcctg agcgtgggcg tggtgtatcc gggcatgccg cacagcgaca
    27781 agcgtgacgc ctatgcctcg gacatcacct acggcaccaa caacgaattc ggtttcgact
    27841 acctgcgcga caacatggcg ctgtccaagg ccgaccgcta ccagcgcggc ctgcactacg
    27901 ccatcgtcga cgaagtcgac tcgatcctga tcgacgaagc acgtaccccg ctgatcatct
    27961 ccggcccggc cgacgattcg ccggagctgt acatccgcgt caaccgcgtc gtgcccaacc
    28021 tggtcaagca ggaagtggaa gacggcgaag gcgacttctg ggtcgacgag aagggcaagc
    28081 aggtgcacct gtccgaagcg ggcatggagc acgccgagca gctgctggtc gacgccggca
    28141 tcctcaatgc cgagaccgag ggcctgtacg ccccgcagaa cctgaccgtg gtccaccacc
    28201 tcaacgccgc gctgcgcgcg cacgcgatct accagcgtga cgtggactac atcgtgcgcg
    28261 atggcgaagt ggtcatcgtc gacgaattca ccgggcgtac cctgtccggc cgtcgctggt
    28321 ccgatggtct gcaccaggcg gtggaagcga aggaaggcgt gccggtccag cgcgagaacc
    28381 agacgctggc cagcatcacc ttccagaacc tgttccgcat gtacaagaag ctgtccggca
    28441 tgaccggtac ggccgatacc gaagcgttcg agttccagag catctatggc ctggaagtgg
    28501 tggtgatccc gaccaaccgc ccgaccatcc gcaaggacag cccggatcag gtgttcctca
    28561 accgcaaggg caagttcaac gcggtgctgg ccgacatcga agagtgcgcc aagcgcggcc
    28621 agccggtgct ggtgggtacc acctcgatcg aaacctcgga aatgctgtcc gagcacctgc
    28681 gcaaggccgg cgtgcagcac gaagtgctca atgccaagca gcatgaccgc gaagcgacca
    28741 tcgtcgccaa cgccggtcgt ccggcggcgg tgaccatcgc caccaacatg gccggccgtg
    28801 gtaccgacat cgtgctgggc ggttcgctgg aagcggaaat ccacgagctg ggcgaggacg
    28861 cgaccgacgc gcagaaggcc gcggtcaagg ccgaatggca gaagcgccac gaggcggtca
    28921 aggcggccgg cggcctgcac atcgtcggca ccgagcgcca tgagtcgcgc cgtatcgaca
    28981 accagctgcg tggccgttcg ggccgacagg gtgacccggg ttcgtcccgc ttctacctgt
    29041 cgctggaaga caacctgatg cgcatcttcg cctccgactg ggtgcagaag gccatgcgca
    29101 tgatgggcat gaaggaagac gacgtcatcg aggaccgcct ggtcagccgc cagatcgaga
    29161 aggcgcagcg caaggtcgag gcccacaact tcgacatccg caagaacctg ctggacttcg
    29221 acgacgtcaa caacgaccag cgcaaggtga tctacgccca gcgcgacgag ctgctggacg
    29281 ccgagtcggt gaaggccaac gtcgacggca tccgcgacga cgtgatcttc gacgtggtgg
    29341 cccgcttcgt gccgccaaac tcgatcgacg agcagtggga cctgcgtggc ctggaagcga
    29401 ccctggagtc ggacttcggc ctgcagatgt cgctgaccga cctggtcaag gaccacgagg
    29461 aactggacgc cgaggccatc gccgccaagg tgcaggagcg cgtcaaccag cacttcgccg
    29521 agaaggaagc cggcgtgggc gaagagacca tgcgcgcgct ggagaagcac gtgatgctga
    29581 ccgtgctgga ccagagctgg aaggagcacc tggcacgcat ggattacctg cgccagggca
    29641 tctacctgcg tggttacgcg cagaagcagc cgaagcagga gtacaagaag gaagccttcg
    29701 aactgttctc cgacatgctg gagaacgtga agcgcgaagt ggtgaccctg ctgtcgcgcg
    29761 tgcgcatccg cagcgacgag gaagtgcagg cgctggaagc ggcagagcgc cagcaggccc
    29821 aggcacgcct gagccagtcg cagttccagc accaggacgc gggcggctac agcgccgacg
    29881 aggaagcggc gcaggtggag gccgaacgcc agggcgtcgc gcagctgcag cgcgatgaac
    29941 cgaagatcgg ccgcaacgac ccgtgcccct gcggcagtgg caagaagtac aagcactgcc
    30001 acggccagct gagctgacca cctccggaga gccccgcgaa agcggggctt ttcatttccg
    30061 gcgggtgatc cagggtggat ccgcgattgc gccggtcccc ctgttctggg catgctctgc
    30121 gcatggctcc tcccacccga tcgatccacg tcgtggccgc cgtcatcacc gacgcccgtg
    30181 gccgcgtgct gctcaaccgc cgtaccgaga accgcgacat ggccggcctg tgggaattcc
    30241 ccggcggcaa gcgcgaatcc ggcgagacct ccgaacaggc gctggtacgc gagctgcgcg
    30301 aggaactggg catcgaggcc gatgttggtg agtggctgat ggatgttccg cagcgctatc
    30361 cggacaagca tctgaccctg gaagtacgcc atgtgcgcag ctggaagggc acgccgcgcg
    30421 ggcgcgaggg ccaggcgatc acctgggtgg cgccggacaa gctgggccgc tattcgatgc
    30481 cgccggccga cctgccggtg gtggcggccc tgcgccagcc cgacagctac ctgatcaccc
    30541 cggccccggc cgacgatgcc gacagcgtgc agcagtggca tgaccagctg cagcgcgcgg
    30601 tggcggcggg ccagcagcgc atccagctgc gcctgccacc ggcgcacccg cagcggcagg
    30661 caatgatcga gcaagtggtg cgtgcgcatc gtcgcagcgg cgtgcagtgg ctgctcaacc
    30721 gcgatatcga actggcacgc gcgctgagcg tgggcgtgca tctgggcagc gaacagctgc
    30781 agcagctgtc gcagcgcccg ttgcccgagg ggcagctggt ggcggcgtcc tgccacgacc
    30841 tgcagcagtt gcaggcggca caacagctgg gctgcgactt cgcggtgctg ggcccggtgc
    30901 aggccactgc cagccacccc gacgccgcac cgctgggttg ggatgctttc gccgagctgc
    30961 gtgcgcaggt gtcactgccg atctatgcgc tggggggcat gggcagcggc cacatcaccg
    31021 aagcgcgccg ccatggcggg cagggcatcg ccgccatccg cgggctgtgg ccggcgtgat
    31081 gcgagcaggg tcggtttccc gcaacgtgcg gcgctgaccc ctcaccggat gcagtagatc
    31141 cacgccatgc gtggatgacc ccctgcgatc acaacgtgat ccagaaacac ccgtactgcc
    31201 gccgcaatcc cagcacggtg gaggcacgtg caacgctgcc cggcaacgtc tgctccaggc
    31261 gcaggccgac cggatgccgc gcggcagccg gttcgggttc ggagcctggc accggatcac
    31321 cctgctccag cgcctgcgag gtgtcctgtt cctgccgcgg atacaccggc acaacgtcca
    31381 ccagcggccg ccgcgccaat gattccagct ggccgaggat gcgctgcgcg ccggcgtcgg
    31441 agaccgcgcc ccacaggtac agcgaggaca gccggttcac gtcgttgctg aggatgccgg
    31501 tacgcagcgc ttccaccagc tcgctcagcc gccgtgggca gcgtgcaccc agggtgtcgc
    31561 gctgcagggt gctgccggtg ggcgcaggcg gcggcagccg tgactgtgcg cccaggctgt
    31621 cgcaggggcg gtcggtatac acgctctggc cctgtgcatc ggtgcagcgg ttcaggcgcg
    31681 tggattgcgc gtgggcgacg ctggtggcag accacagcgg cagcagcaac agcaggaagg
    31741 agagccggat catccgcgca gggtaacgcc gttccgcttc gcgcggcgtg ctttcacagc
    31801 tgcagcagtt tcagcaccga cgtggtcggc ttggccaggt tcaaggtgta gaagtgcagg
    31861 ccgggtgcgc cgccctcgat caggcgctgg caaagcttgg ccaccacttc ggtgccgaat
    31921 gcacgcaccg aatccacgtc atcgccatag gcctgcatcc tgcggctgat ccagcgtggg
    31981 atctccgcgc cgcactgctc ggaaaagcgg cgcagctggc tgaagttggc gatcggcatg
    32041 atgccggggg tgatcggtac ctgcacgccg agccgctgca ccgcgtcgac gaaatggaag
    32101 tacgcatccg gattgtagaa gtactgggtg atcgccgcat cggcaccggc atcgatcttg
    32161 gccttgaagt gcttcaggtc ggccaatgca tcggaggcct gcggatgcgt ttccgggtag
    32221 gcgccgacct cgatgcggaa ggcgtcgccg tgctcggcgc ggatgaaggc gatcagttcg
    32281 gcggcatagc gcatgtcgcc ggggaaaccc atgccggagg gcaggtcgcc gcgcaacgcg
    32341 accaggcggt cgcagccgat ggcgcggtac agcttgagca gttcacggat ttcctggcgg
    32401 gtgccgccaa cgcaggacag gtggggggct gcttcgaagc catggtgctg gttgaggtgg
    32461 cgcacggttt cggaggtgta gctcagggtc gatccaccgg cgccgaaggt gcatgacacg
    32521 tactcgggcc cgtagtcctt cagcttgtcc gcggcgcggt cgagctggct gcgctgttcg
    32581 tcggtcttgg gtggatagaa ctcgaagctg atggcggtca tggcgcgggc ggcggcggca
    32641 ggtgcgggta agtatatcgc ttcatcaaga tggatgtgta cgtgcgatgt gatgggcacc
    32701 gtcccccgcc ggcgaccgtt cgcccgggtg tccggccgtt gctccggatt cgcaacaggg
    32761 gcgctgtggc tggcggcacg ctgagcccaa cccggcaaca cccacccgat gaaggagcag
    32821 acgatgaaga tcttcctggc actctggtac gcgatgaagg cgctggcacg gctggcgatg
    32881 atcggcatgg cgatggccgt gctgggttcc ggatcggcgc atgcggcccc aacccgcggc
    32941 ccggcccccg gcaaggtgca ggtcgaggtg gtcggcaagg gccgcccgct gttgatgatc
    33001 cccggcctga acagcagcgc cgaggtctgg cgcgagacct gcctggcctt gaaggatgtg
    33061 caatgccatc tggtgcagtt gccgggtttt gccggtgccg caccggccga tccgcgcctg
    33121 gccgggttcc tgccggcgat gcgcgcgcag ctgctggctt acctgcatga tcagcatctg
    33181 gggccggtag tggtgattgg ccacagcctg gggggcctgc tggggttgca gatggcacag
    33241 gccgagccga aggcggtcag cgcgctggtg gtggtggacg cgctgccgtt cctgccggcg
    33301 gcacgcgacc cgaatgccac cgcggacagc gtgcggccga tggccgagca gctgcgcaag
    33361 ggcacgctcg ccgccgacgc cgcgcaatgg caggcacagc tgaaggccgg cctgccgggc
    33421 atgacccgtg acccgcagcg gcaggccgaa ctgggccgct ggggcgaaag cagtgaccgc
    33481 cagaccacgg ccgatgcgat gcacgcggtg atgaccaccg acctgcgtga cagcatcgcc
    33541 tcgatcagcg cgccgacact ggtgctgggc agctgggccg gctaccagcc gatgggaggc
    33601 accgaagcga gcacccgggc ggtgttccag gcccagtacg cgacgctgca cgatgtgcag
    33661 atcgcgatga gcgcgcaggg tttccacttc ctgatgtggg atgatccgag ctggctgcgc
    33721 gggcaggtgc aggccttcct cgaccgtcac ccctgagttt caacacgcct cggaatggac
    33781 atgccggact cctcttcgtc ggtacgcttc tggctgctca atgcgctggt gtgggcactc
    33841 tacgcgatcg ccggcctcgg gctgcggcat gcctatctgg ccgacgccgg aagcgcgggc
    33901 gtgctgatca cggtcggcct ggcggtcagc ctgttcggct gcagcggtgg cattcgtgcg
    33961 ctggccctgc gcgccggctg gtggtcgcgc ggtaccgccg ggctgttgtt gcggctggca
    34021 gtgtcggtgg cgctcggcgc ggcgctggcg caggcgctgg tgatcatcgc cttgcacacg
    34081 gcgctggcac tgggatgggt ggatgccggc cgccaggtgg ccgacttcag ccccaaggcg
    34141 ctgctgctct actggtacac cacggcggtg atgctggcgc tgtggaccgc gctctgggca
    34201 ggcctgcaca gcctgcgccg gatacggggt gcggagctgg cgcggctgcg cgcggaagcc
    34261 gaacgcagcg cgctggagcg cgatgcactg cgcgcacggc tcaatccgca tttcatgttc
    34321 aatgcgctga acaacctgcg tgcgttgatc ctggaagatc ccgagcgcgc acgcgacatg
    34381 gtcacccgcc tgtcgcgcac cctgcgccag gcgctggcgc acaaccgcaa cgagcaggtc
    34441 acgctggccg aggaactggc ggtggtggat gactatctgg cgatcgaggc gatccacttc
    34501 gaacagcgcc tgcaggtgcg gcagcagatt gatgccgatg ccacgcaggc acagttgccg
    34561 gcgatggcgc tgcagctgct ggtggaaaac gcgatcaagc acggcatcgc cagccgcccc
    34621 ggcggtggcg aagtgcagat ccgtgccacg ttggacaacg atgtgctgcg cctgcaggtg
    34681 gacaatccat tgggcagcgc gatcgaaccc actcacgggc atggtgtcgg cctggcctat
    34741 ctgcgtgcgc agctcggtac gcaaggtcgt ttcaccctgc agccggtcgg cgaccgcatg
    34801 caggccgtgc tggagattgc gcaatgagcg gcatgctgcg tgtgttgatt gtcgatgacg
    34861 cgcggctggc gcggcaggag ctgcgcacgc tgttgtcggc gttgccgtgg gtgcagtgcg
    34921 tgggcgaggc cgacgacgtg ccggctgcgc gcgaggcgat tgcaacgctg gcaccagacc
    34981 tggtgctgct ggatgtgcag atgccctccg gcagtggctt cgacgtgctg gacgggctgg
    35041 aatccgtgcc ggcggtggtg ttcgtcacgg ccttcgacgg ctatgcggta cgcgccttcc
    35101 aggccaacgc gctggactat ctggtcaagc cggtggaggc gccgcggctg ttggaagcgc
    35161 tgcagcgggc gcgccagcgc gggagggtgg caggcgaaac cccggagccg cgcagcacgc
    35221 tgggcgcgca ggaccaggtg ttcgttcgcg agggcgagcg ctgctggttc gtggcggtct
    35281 ccgagatccg gcggctggtg gtggatggca actacacgcg gctgtggttc cgcgaccaga
    35341 acgcgctgct gacccgcagc ctgagcgcat tggaagcacg cctgccgcag gagctgttct
    35401 tccgggccaa ccgcaacacg ctggtcaatc tgcgccgtat ccgcgcggtg acgcccagca
    35461 tcggcgatgg ctacgacctg gcgctggacg acggcagcga agtggaagtt tcgcggcggc
    35521 aggcacgcga gctgcgcgag cggatggcgt tgtagccgcc gctacagttc ggcactgacc
    35581 gggctggtga cgaagcccca cagcaggcgt gccatcaccg cgggcgatcg tgcctgtgca
    35641 cgggcatagg cctgcagggc atccagtcgc gggcggtcgt agaggtggcc ggccagcagc
    35701 acggcatgca cgcggcgggt gttggcggtg tcgtgcagcg ggttgccatc gagcaggacc
    35761 aggtcggcgg ccttaccgac cccgatgctg ccgtgcgatg cctgcagctc cagatgatgc
    35821 gcggcctgca gcgtggcggc acgcagtacg tcggcctggc tcaggcccgc ccgtcgcagc
    35881 cactgcagtt catcgtggta gcggaaaccg cccagcccgg tatcggtgcc gaccagcacg
    35941 gtgacgcccg cacgatgcgc ggcaccggtc agcgccagtc catgcgcgaa gtaggctttc
    36001 agcacgtctt cgccgcgcag gcctgggtag tgctccaccg tggcctgcag atcgtcgcgc
    36061 cacgcccatc gcgaaagcgg gtccagatag gccaggcgcg gatcgttgac gaaggccgga
    36121 tcacgtgcgc gtgcgtcttc ctcgcgggtg acgtgggtcg gcacgaatgc cgcagcgctg
    36181 gcctgcatca atccgaacgc ttcgctgcag agggccggct ggtagccgct gaccatccgt
    36241 tcggccagcg cggtcgggtc ttcgccgtcg agcgtgccac ctcgccacgc cgccgcgttg
    36301 tcgaagcagt ggcgtacgaa cagatgggcg tgctcgaagc tgcgctggcc cgcctgcaac
    36361 gcggtttcca gtggcacggc cttgggcagg tggccgacca gcgggcgacg cagctgctgc
    36421 gcctcggtgg ccagccgctg gtaggtatcg gcacgcagcc ggttgtagac cttcaacgcg
    36481 tcgacgccac gcgcgctgta cgtgcgtgca cgctcagcag cggcttccgg cgcgagtaac
    36541 ggatcttcga agtagaagct ggcgacctgc acgaaacgcg gcgcaacctg ctgcccggcg
    36601 atggcctgtg tggtccagtg gcgcttgtcg gccacgcagg cgatcagcgg atcggtggcc
    36661 tgcgggcagt ccatcatgtc gcgggtaccg gtgatgccgt tggccagcat cagcgggaac
    36721 tgtagttgcg gcgacaactg catagcatgg gtgtgcatgt cccagaagcc cggcagcagc
    36781 cagcggccac cggcgtcgaa gaccggcaac gctgcatcgg caacgctttc gccgatggcg
    36841 gtgatcgtgc cgttgtgcag cgtcaccgtg gtcggttcgc tgacctggcc gcgcacgacg
    36901 tctaccacac gggcattgac gatcaggcgg ctgttgccag gctcgggcag cggcggtgcc
    36961 ggcagcggcc agaacagggc ggcggcgaac agcaacggcg gcgccagcag gaatgcggcc
    37021 agcaccttca gccagcgacg acggggggcg ggacggggca atgcgcgtgc tgcttccatg
    37081 agccggcgat ccttgcggtg ggtcctgcgc agggtgcggc aaacctgcat cggatgccag
    37141 tgagcatcgg catccgcccc tgccgcctgc ggggcggtta ccctgtgcgg cagaactcct
    37201 gatcacatcg cgccatgtcc atcgttctca ccgatttcgc ccgtccccgc ctgttcccgc
    37261 gcgtgccgcg cggcaacacc atccaggatt gcaccgccga gcagttcgag gcgcacctca
    37321 atgcgcacgc accgctgaag gtgctcgacg gttatgcgcc gttctgcaag ctgtttgtct
    37381 acgagaactg gaccagcacg cgttgcctga cggtgccggt gaccgaggcc aaccgccacc
    37441 agctgcgcag cggctacgaa gcgcgcaacc gtgatgagct gccggtgctg gtgcgttggt
    37501 tcgaaggcgt ggagtcgccg cgcgcgaact atctggtagt gatcctgtac agcgccgagc
    37561 agctggccag ggaaggttcg ccgatcgagg ccgactgggg catcgtcggc tgcatctaca
    37621 ccgccgaacc ggaagaagtg ccgatggcgc cgatcaccat gatgcgcaat gcgctgggcg
    37681 tggaggaggg cggttccggc gtgccgctgg accgggaggc ctaccagcgc tcggtggcgt
    37741 tctgggagag caacgccaac tggcggccgt agccgtcgcg ggccagatcc tcgaaccgcg
    37801 gggcgctgac ccgatcaccc gctgccatgc gccaggtaag atcgggcgag ataaacccac
    37861 ggagggcggg gcatggctgt ctggacaagg atgattccgg tgttgctggc aggcatcttg
    37921 cccgctgccg cggtgttggc ggcgaagccc gctgctgaca ctgcgtgtgc gccattggcc
    37981 gcggcttccg gacttcgcga tgcgagcgtg actgcattgt cgatgcagcc ccgggacgga
    38041 cactgcgtgg tcgaggtgac ggcgagcgac ggcaaggggc tgcttcggca gcagcagatg
    38101 ctggagatac tggcgcagca tgcctgcgca gcgcctgcgg aggtgacggc cgacaacctg
    38161 cgtccatcac tgctgctgcg cacaccgaag cgatgtgctg cgcgcaggag ccaggacctg
    38221 ttcgccggcg aaggtgatcc ctggttacag ccgcgcggaa agctgccgcg ttatccgcgc
    38281 gaagccatgg atcaggggct ttccgggcgc agcctgctca aggcactgat cgatgcgaac
    38341 ggcgcagtgg ttgcggtgat cgtggagact tccagtggcc atgcggtact ggacgaggcg
    38401 gcggtggaag agctgcgtgg ttggcatttc ttgcgtggtg atgcccaaag caccgtgccg
    38461 gcgctgacca tcgtgcgcgt gccgatgcgg tatgagcttg tggagtgacc gccatccacg
    38521 catgcgtggc tgcgtccctg tcagatggct ttccactccc accaggggta atggtattcg
    38581 cggtcgatcg cctgccagtg ctggccgcac tgcgtgcagg caacggtgtg gcagtcgccc
    38641 catccatcct cggcgtcctg caccgagagc agctgcatct gcccctgttc aagcaggcgg
    38701 cgcggatcga agaacgggta gccgggattg agcgcgcaca ggcagtcctg gcgtgcctgc
    38761 cagtagcgca gccgctgcag ggccgccttc aggtgcgcct ggttgctgat cagcatgccg
    38821 cccagtgcga tgccctggca gcatttttca atcaggtccg tgtgcaccgc cagcgcctcc
    38881 agcgacgacg cgctgaacag ccgtgcgacc gtgcgtgccg cgtcggtgat gcgtgcaccg
    38941 tcgcgtgaca gcaggtcctg cagcagtaca tcggcctgtg gatcttcaag ccggggtgac
    39001 ggtgcggcga accacggcca gcgcatcagc gtgccttgcc gattgccgcg tagtggccgg
    39061 cggtcaggcg cagcaggtcg tccggcgcca gttccacttc caggccacgc cgcccggcgc
    39121 tgacatgcag catgggcagc acttcggcgc tggcatccag gaaggtgcgc aggcgcttct
    39181 tctgcccgag tgggctgatg ccgccgacca ggtagccggt cgcacgctgc gcggcatcgg
    39241 ccgcggccat ttcgcacttc ttgcagcggg cggcttcggc cagcgccttc aggtcgagct
    39301 ggccggccac cggcacgatc gcgaccagca gttcgtgggt ttcagtgctg gccagcaggg
    39361 tcttgaacac ctgggccggg tcgaggccga gcttgtcgac ggcttcgccg ccatacgatt
    39421 cggcgtgggc gtcgtgcaca tagctgcgca cggtgtgggc gatcttctcg cgcttgagca
    39481 ggttgatggc cggggtcatg gaggcatcgt agcgcggggc ggaggcgttg ccttgaccga
    39541 ggctattgcg ggtggagcat ccacgcatgg cgtggcagac tcgggtcaac aggacgcagc
    39601 acaggggagt gaagtggtct atcagcggat gatcgcggcg ggtctgcttg ccggaatgat
    39661 ggtggtcgct ggtccggccc tggccaatga gggccgctgt acacgcgggc aggccgtgcg
    39721 ggacttgatc gatgcgggca tggtgtcgat ggcatcgcat cgaaagggcg accaatgccg
    39781 tttcaccggg gtcgggtcgg atatccgcgc aacgtggcgg caggcgctgt tcctcgccgc
    39841 gctggcgggc aactgtcgcg gcattgccat ggaagtggat ccgaagcagg acacccgcat
    39901 gggcatccgc atacccgagc gctgcctggt cgataccgac ccgccggatg cgccgccggt
    39961 gggatggtgg ccgctgtcat cgcctgcccc aaggtatccg caggaggcgt acaagcaggg
    40021 tctgaaaggc acgaccgtgg tgctggtggt gatcaaccgc gaaggccggg tcaccggcag
    40081 gatcatcgcc gagtccagtg gccatcccac gctggatgcg gcagccgtcg acgcggcatc
    40141 ggcctggacg tttaccagca agcgaggcga cccgcccgac atcagcctgg ccaggattcc
    40201 ggtcaacttc gacttctgag gggcaaacgc agaacgggcg cccgaaggcg cccgttccgt
    40261 gtgttgcatg caccgggtgc gccggccgtg ggccggcaca ccacaggcat cagtagcggt
    40321 agtggtccgg cttgaacggg ccttccaccg gcacgccgat gtagtcggcc tgttcctggc
    40381 tcagggtggt cagcttcacg ccgatctttt ccaggtgcag gcgcgccact tcctcgtcca
    40441 gcttcttcgg cagcaggtag accttcttct catagctgtc cttgttcgcc cacaggtcga
    40501 tctgtgccag ggtctggttg gcgaagctgt tggacatcac gaagctcggg tggccggtgg
    40561 cgcaacccag gttcaccagg cggccttcgg ccagcaggaa gatcgcgttg ccgttcggga
    40621 agatgtactt gtccacctgc ggcttgatgt tgacgtgctt gatgccggcg aacgacacca
    40681 gcgcatcgac ctggatctcg ttgtcgaagt ggccgatgtt gcagacgatg gcctggtcct
    40741 tcatcgcgct caggtgctcg atgcggatga tgtccttgtt gccggtggtg gtgacgtaca
    40801 ggtcggcacg gcccagggtc gattcgatgg tgttgacttc atagccttcc atcgccgcct
    40861 gcagggcgca gatcgggtcg atctcggtga cgatcacgcg cgcgccatag gcacgcagcg
    40921 acgcggcgca gcccttgccg acgtcgccgt agccgcagac cacggcgacc ttgccggcca
    40981 gcatcacgtc catcgcgcgc ttcaggccat cggccagcga ctcgcggcag ccgtacaggt
    41041 tgtcgaactt gctcttggtg accgagtcgt tgacgttgat cgccgggatc agcagggtgc
    41101 cggcctgggc cagctggtac aggcgatgca cgccggtggt ggtctcttcg gagacgccct
    41161 tccagtcctt gaccacgcgg ccccagtaac ccgggcgctc cttggccacg cgcttgagca
    41221 ggttcttgat gacctgttct tcgtgcgagg aggaggcggt gttgacccag tcgctgccgt
    41281 tttccagctc gtagcccttg tggatcagca gggtcacgtc accgccgtcg tcgaccacca
    41341 gctccgggcc ggtcagggtg ccgtcggcca gggtgaaggt cagcgcgtcc agggtgcagt
    41401 cccagtactc ttccagggtt tcgcccttcc aggcgaacac cggggtgccg gtggcggcga
    41461 tggcggcagc ggcgtggtcc tgggtcgaga agatgttgca cgaggcccag cgcacgtcgg
    41521 cgccgatgtc cttcagggtc tcgatcagca ccgcggtctg gatggtcatg tgcagcgagc
    41581 cggtcacgcg cacgcccttc agcggcagct cggcctggta cttgcggcgg atcgacatca
    41641 ggcccggcat ctcgtgctcg gcgatgtcca gttccttgcg gccccagtcg gccagcgtga
    41701 tgtcgcggat cttgtaatca ccttcggtgg agaaggtctt ggcaacagcg ttcattcgtg
    41761 tgctccggtt gtgggcgagc gggtgctcgc atctggccgg gcgccgttgt tgcatagcca
    41821 ccttaccgag cctggccggg cctcgtggga tccggtcgca gcgcccctcg gcaggggaga
    41881 acccccatta tatcgcggcc ccgtcatgac acagggatga cccaaccatc ggcagatggg
    41941 caggcatgca cggcctgtta aggtcggtgt tttcacgcat cacacaggtg gaacgatgag
    42001 catgcacacg cgccgcgcac ggcgctggac cggcctggtc ctgtcgatgg gactgctggc
    42061 agtggccccg ctggccttct cggccacccc tcagccggct gcggcgcagg cgcagggcgt
    42121 cacctcgtac gaactgccct cggccgcgct gcaggcggtg gtcgacgcgc cgcgcgcgcc
    42181 ctcgctgttc ctgtcgccgc gccgcgacgt ggccgcgctg atgcagatgc cgtcgctgcc
    42241 gtcgatccag gtggtggcgc agccggaact gaagctggcc ggccagcgca tcaacccgcg
    42301 cacgttctcc gacagccgct tcagcttcgg ccagaagctg tggctgatga acgtggccga
    42361 cggcaaggag cggccgatca gcggactgcc gggcacgctg tcgatcgcca gcctgatgtg
    42421 gtcgccggac cagaagtggc tggccttcaa ccaggtcgac gccgccagcg gtgccaatga
    42481 actgtggctg gtggatgtgg ctgccggcag tgcccgccgc ctggtcgccg gcctgaacac
    42541 ggtgatgggc agtggctacc agtggctgcc ggacagccgt gggctggtgg tgttcacccg
    42601 cccggccaac ctgggcgccg cccccgccgc cgacggcatc ccgaccggcc cggccgtgca
    42661 gcagaccagc cagggcggcg gcgtcgtctc gatccgtacc taccaggacc tgctgaagaa
    42721 cgaggccgac gcgcgccagt tcgactacta cgccaccacc cagccggtgg aagtcagcct
    42781 cgacggcaac acccgcccga tcggcgcggc cggcatcttc atgggcttct cggtttcgcc
    42841 ggatggccgc tacgtgctgc gccagccggt gcagcgcccg tactcgtacg tggtgccggt
    42901 ggacagcttc ccgcgccgca tcgaagtgat cgaccgtgcc agcggcaagc tggtgcacac
    42961 cgtggcggtg cgcccgctgg tggaaggcct gccgaccggc aacgatgcgg aggtgaccgg
    43021 cgtgcgtgac atccgctggc gcggtgatgc cgatgccacc ctggtgtggg ccgaggcgca
    43081 ggacggcggc gacccgaaca gggaggccaa ggtgcgcgat gcggtgctga tgcaggccgc
    43141 gccgttcgac aaaccgccgg tgaccctggc ccagctcggc agccgcctgg ccggtatcag
    43201 ctggggccgt ggcgacctgg ccctgctgac cgaatcgtgg tggaagaccc gcaagaccaa
    43261 gacctggctg atcgccccgg acaacgccgg tgccgagccg cgcctgctgt gggatcgcga
    43321 tgcgcaggac cgctacgccg atccgggccg gccgctgatg tccagcgacg accgcggccg
    43381 ctcgctgctg cagaccagca ccgatggcag cagcctgtac ctggccggtg ccggtgcctc
    43441 gccggaaggc gaccgcccgt tcgtcgatcg cttcgacatc gccacgggca aggcgacgcg
    43501 cctgttccac tcgcaggcac cgagctattc gttgccggtt gcgctgctgg acgaacaggg
    43561 cagctcgctg ctgctgagcc gtgaaagccc ggacgagccg gccaacttct acgtgcagtc
    43621 gctggccgac gccggcgccg cgccgcgcgc actgacccac tttgcccacc cgctgccgca
    43681 gctgaagggc gtgcagaagg agcagatccg ctacaagcgc aaggacggcg tcgatctgac
    43741 cgcgaccctg ctgctgccgc cgggctacga cccgaagcgt gacggcccgc gcccgctgct
    43801 gatgtgggcc tacccgggtg agttcaagag cgcagccgcg gccagccagg tgaccgattc
    43861 gccgtaccgt ttcaacgcga tcagctactg gggcccgcag gcgttcctgg ccaagggcta
    43921 cgtggtgctg gccagcccgt cgatgccgat catcggcgag ggcgacaagg aacccaacga
    43981 cacctacatc gaacagctgg tggccaatgc gcaggccgcg gtggatgaag tggtgcggcg
    44041 tggcgtgacc gaccgcgagc acatcgccat cggtggccat tcctacggtg cgttcatgac
    44101 cgccaacctg ctggcgcaca cccgcctgtt caaggccggc atcgcgcgca gcggcgccta
    44161 caaccgcacg ctgacgccgt tcggcttcca ggccgaggag cgcaactact ggcaggcgca
    44221 ggacgtgtac cagaagatgg cgccgttcaa ctacgccgac aggatcaagg atccggtcct
    44281 cttcatccac ggcgtggacg acaacaactc cggcaccttc ccgatccaga gcgagcgcat
    44341 gttcgccgcg gtgaagggcc tgggtggcag cgcgcggctg gtgatgctgc cgaacgaatc
    44401 gcatgcctac cgcgcacgcg aatcgatcat gaccatgttg gccgagagcg agcgctggct
    44461 ggagcagacc atcggcccgg ccgagcaggc caaggcgaag aagaagcgct gaccg
//
LOCUS       DAOKIP010000010        43860 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.010,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000010 DAOKIP010000000
VERSION     DAOKIP010000010.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 43860)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 43860)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..43860
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.010"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(56..382)
                     /locus_tag="QEL58_000520"
     CDS             complement(56..382)
                     /locus_tag="QEL58_000520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019336975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675040.1"
                     /translation="MLILALLLVLLVLGLNLVATVLIVRRDGLSAGGRTVQLLLVWLL
                     PLVGAILCMAVATADGSGSRGDNGLGGAYDYSGGSSSDNHSHHGHSSSDCSSDGGGSD
                     GGSCGD"
     gene            534..1481
                     /locus_tag="QEL58_000521"
     CDS             534..1481
                     /locus_tag="QEL58_000521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004147861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside hydrolase"
                     /protein_id="HDS1675041.1"
                     /translation="MLKVIFDTDPGVDDALALLYLHKHPQIDLIGVTTTFGNASVEST
                     THNALYLKQTWGFAAPVARGAAGPLQPEATPEAWPVHIHGHNGLGNHPVPAQLDVAAD
                     ARPAAQLIIDLVRAHPGEVTLVAVGRMTNLALALQQAPDIAGLVRGVVIMGGAFHVNG
                     NITPAAEANIWGDAEAADVVFTTDWPVTAIGLDVTTRVEMDRDGLDTLAGIGGADAEL
                     VRALSQDYVDFYLQAGHKGMVVHDCCACIALTRPELFQFERASVRVATDGVARGMTIP
                     KPEGMGFGPSVWDGHVLQSVAIGVDAAAVLADIEQTLKV"
     gene            complement(1486..2745)
                     /locus_tag="QEL58_000522"
     CDS             complement(1486..2745)
                     /locus_tag="QEL58_000522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDS1675042.1"
                     /translation="MTVARQRSMWVAGLSTVVEWYDFTLYLYFATVLSRVFFGGGEQA
                     MLVTLAGFAVSYLMRPLGALCFGHLGDRLGRRWMLLASMALMAAAMLATALLPTAATA
                     GTTAGVLLLVLRCVMAFSVGGEYTGVVAYLLESAPERRRGLVTSLASAASEVGALLAV
                     AISAATVALLAPAQLDSWGWRIPFFVGAALALVILVARSGMHESPEFERQRREGSIPA
                     TPLRHVLRHHPRAVARTFAISALGSITYYVGITYVPAFLHAQGHDEGDALWLSTIAAV
                     AVIAITPLCGALSDRVGRRPMLLGLTVLAALLPLSLFAWMAQATAWGIALAAVLLACV
                     AGGVSAVAAPATAEQFPGEGRVSGLALGVTMATAVFGGATPWLAQWWVQRSGWAAAPG
                     AMIALVAVLVLPVLWTLPETVPGRSRR"
     gene            complement(2801..3574)
                     /locus_tag="QEL58_000523"
     CDS             complement(2801..3574)
                     /locus_tag="QEL58_000523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDS1675043.1"
                     /translation="MIANALIADDEPLLRQALAAQLAQAWPQLQVVAQARNGREALQA
                     FETLQPQVCFLDIHMPGLSGIDVAARIARRAQVVFVTAYDAYAVQAFAQGALDYLVKP
                     VDAQRLHDTVQRLQQRLQQPLPLQDLQKQLQQLAERLSLPAPTPLRWLHAQVGNVLRV
                     IPCSAVDFLRADSKYTQVGWRDDDGRPGEAVIAMSLKELVQQLDPDSFVQVHRSAVVN
                     RHAVKLLVRGDNETAQLYLRGRDDVLPVSRRYLGAFRAM"
     gene            complement(3571..4644)
                     /locus_tag="QEL58_000524"
     CDS             complement(3571..4644)
                     /locus_tag="QEL58_000524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HDS1675044.1"
                     /translation="MLPAMSDVLSPPPVSLLRRTLWCAGISLALGALLVIDWHPWWTV
                     LPRALALGLAAMLVFTVLERWPGSLPRWLSRWVVQILAVAAVIPLGTLMIYLAGTDAG
                     APPFWQDADRWTGFLTLNVVGLLVAPWVALAALVRHKDALARHQALAFALERSELERQ
                     ALEARVQLLQRQVAPHFLFNTLANLQALVDSGSPQASVVMRHLVAYLRGSVPRLQQPV
                     VRMEDEIALVSAYLELMHMRMPDRLRFRLDVAEQVRALGCPGLSVLTLVENAIRHGID
                     PCEDGGEVVVQVRRDGACCEVCVVDDGRGLSAVAPGLGTGLQTLRQRLQLLYGDAASL
                     QLQAGPERGAIARLRLPARELPA"
     gene            complement(4667..5527)
                     /locus_tag="QEL58_000525"
     CDS             complement(4667..5527)
                     /locus_tag="QEL58_000525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008267898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2306 domain-containing protein"
                     /protein_id="HDS1675045.1"
                     /translation="MSLPAVAITTRRALRDGQVPASRRQRLLRIGALAWLGSAALGQL
                     LFAVYIVGFYGRSTLAGQPLRWNEVMPHGYVAGATTFNAVLALHLLLAAGIVLGGWLQ
                     LWPALRRWAPAVHRWNGRLYVLAAVLLALGGLAMVWVRGGAAGDVSQHLGTSLNALLI
                     LWFAVATWWRARQQRLGEHRAWALRLFLAVGGVWFFRIGLMLWLLLNQGPAGFDPETF
                     TGPALTVLAFAQTLLPLAVLELYLRAQRSAGAAHAWRVGVVLLVAAVATLAGSLAAAA
                     LMWWPPLAAG"
     gene            complement(5662..6675)
                     /locus_tag="QEL58_000526"
     CDS             complement(5662..6675)
                     /locus_tag="QEL58_000526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012479422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675046.1"
                     /translation="MQEAHHSRGWPRYVALLVGALLLTGCQRTPEVPGEAPAADTPVA
                     APVASTDLSPLLDALPTCALEGWYIDQQTDRPAHPWLAANAPTPCRQDAENEIATFCV
                     QGQWKGLPVDEVILPTMTFVSFRGAKIGLPLEKARPIVRQGFGQDFPGGAAYEEGREP
                     KLMADPEDAQRSWLLCSTPEPGHDVDSEGSVRYAGMNLPYDHDGCSYRYSPVDFCDAR
                     HRARIEDALQNQKPNFNQHYLLVQIDDRPEYFQRTVVLVDTRTGEATPLPIDAFTGAA
                     GKGGEATGYGTLETGVDQPQFCLDGALLVYRVFEEGRFCFGFDGERFTGHETQYMQAA
                     ASP"
     gene            complement(6773..7183)
                     /locus_tag="QEL58_000527"
     CDS             complement(6773..7183)
                     /locus_tag="QEL58_000527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675047.1"
                     /translation="MAHPRAPMERLIRANADEINRLRQVIRDTAGARWHGPEQRVRHA
                     AACAEYALRYEQLAFPGGYDQALKLLAEHDPGTLDAALTFLEVRPYFFRSGYMWKTLL
                     KRVQRVSMGVKQQARMQRILDAYGAYRVGRLHSR"
     gene            complement(7215..8351)
                     /locus_tag="QEL58_000528"
     CDS             complement(7215..8351)
                     /locus_tag="QEL58_000528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004147841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HDS1675048.1"
                     /translation="MVAVLSTIGLLMGLYVAWRLFWPLRLPTALKVVLSLLLVAVAVQ
                     LRIVATFWGTMASPEIPKLAIATLATGSTAVLLLALVMLVLDAGLLLSRLLRRPRAIS
                     ALRAPRLRPVAAVLALLVSGYGVSQGMAVPKPRQIDVAIKDLPAAFDGYRVLQLTDIH
                     ASRLLTGDWVRKVVEQSNALKPDLIVITGDLIDGSVEARRDDARPLADLHAPDGVIAI
                     TGNHEYYAQYQDWMQAFRALHMQVLENSHLQVRRGEAALTIAGVTDPVAARYGLPLPD
                     LDAALAGADPSAPVILLDHRPRNAREAAARGVNLQLSGHTHGGQIIGMDQLVKRANGG
                     YVSGRYEVDGMTLYVSNGAGLWAGFPARIGVPSEITLVTLRRAP"
     gene            complement(8413..9951)
                     /locus_tag="QEL58_000529"
     CDS             complement(8413..9951)
                     /locus_tag="QEL58_000529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014036331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HDS1675049.1"
                     /translation="MEWLADPSIWMGLATLVVLEIVLGIDNLVFIAILADKLPPHQRD
                     RARVIGLTLALLMRLVLLAALAWIMKLTEPLLTLFDHSFSGRDLILLGGGLFLLFKGT
                     MELHERLEGREHHEDGKKVYASFAMVVAQIVVLDAVFSLDSVITAVGMVDNLGVMYAA
                     VTIAMALMLVASKPLTRFVNKHPTVVVLCLGFLLMIGFSLVAEGLGYKIPKGYLYAAI
                     AFSILVEAFNQWVRFNRERNERRQPFRQRTADAVLRMLGARPANGHDDESEDAHADAE
                     ERLQPAEHEMIRSVLGLADRPVSSVMTVRADVQWIDVARGQDDVVARLVASPHTRLLV
                     GDGDLDSLRGVVQSRDLLADLLQGRPLQLEGNLREPQYVLSSASALQALELIRQHPVP
                     LAVAVDEYGSVEGLVTANDLLAAIAGDLVDTQDERYGVVAQGEGQWEADGALTLDDLQ
                     RLAGVSLPRSADYMTISGLVLERLGRLPDIGDAVEIADVRITVLAMEKRRIARLRVER
                     LPGA"
     gene            complement(9995..10219)
                     /locus_tag="QEL58_000530"
     CDS             complement(9995..10219)
                     /locus_tag="QEL58_000530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012479411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDS1675050.1"
                     /translation="MAIVITLDRMLQERGMTLSELAGRIDITLANLSILKTGKARAIR
                     FSTLDAICRELQCTPGDLLGHDPAQAQDAD"
     gene            complement(10233..10700)
                     /locus_tag="QEL58_000531"
     CDS             complement(10233..10700)
                     /locus_tag="QEL58_000531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2975 domain-containing protein"
                     /protein_id="HDS1675051.1"
                     /translation="MCWLGILAALLAVPLVAHDRRWLLDNVHDAAAAAAHGNDLFLHF
                     CLGLGAIVVLLVLCLVFLRHLLRLLDSAAREQPFTHTNAQRLQRMAWLMLAMELLSIL
                     IGAYAAWMGPDFTWMEVGGGMSITGLVAVLMLFVLARVFAVGAAMRDDLDGLV"
     gene            complement(10951..11874)
                     /locus_tag="QEL58_000532"
     CDS             complement(10951..11874)
                     /locus_tag="QEL58_000532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDS1675052.1"
                     /translation="METVKIQNPDMAWHIAADLHFPPDFDRNRAYPTIISMHPIGSCK
                     EQTSGNVYGEALAREGYVVIAYDASFQGASGGEPRRIEDPTQRVEDVRRVVDYLVTLP
                     YVDAARIGVLGICGGGGYAINATMTERRIKAVTSITGVNFGRLSREGFGGFDPIGSLE
                     AIAAQRTAEMRGGEARVDLFLPPSVEQGRAAGITDIDVLEATDYYRTRGPQPNGVVSA
                     LFSHRGAAVGWDAFHLAEVLLTQPLLVVIGDKPGAFGAYRDGLEIHGRAASKHKQLKV
                     VEGGSHYDLYDQPEPVRQALAAVIPFFSQHL"
     gene            12026..13000
                     /locus_tag="QEL58_000533"
     CDS             12026..13000
                     /locus_tag="QEL58_000533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008267598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDS1675053.1"
                     /translation="MSAPTAINPALLPQLAWFAHIAHHRSFTKAAEEMGVSRPALSQS
                     LKTLEKQLGVRLLHRTTREMSLTEEGQRLFDAVQPSLSTIDSAVRDLRASHDAPSGLL
                     RINTARLTAKTLIEPHLPEFFARYPELRVELVMDDGLSSIVAEGCDAGIRLGERLAEG
                     MIAVPVTPMLEMVVVASPAYLARHGTPSTPAELAGHECLGYRQTGSGTVYAWEFSTPG
                     QHGHDFEVEPRGRYVTNDDEAMIRAALQGLGVMQHIDLSLQPMLADGRLLRLMPEWSA
                     PFPGFYLYVPSREQMPPRVRALMEFLVEKREGVAKALGRPVQAPATGG"
     gene            complement(13004..13504)
                     /locus_tag="QEL58_000534"
     CDS             complement(13004..13504)
                     /locus_tag="QEL58_000534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004147832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDS1675054.1"
                     /translation="MLDIPTLHTARLRLRPQQLDDFGIYAAFLASPRARGMGGPFDEV
                     AAWGQFCHDLASWHLFGHGALMIERADTGACIGQVGINHGPLFPEKELGWLLYDGHEG
                     QGFATEAAEALRDWAFVVAQLPTLVSYMAPDNLASQAVAQRLGGVLDAQAVRSDADDL
                     VYRYLR"
     gene            complement(13518..13955)
                     /locus_tag="QEL58_000535"
     CDS             complement(13518..13955)
                     /locus_tag="QEL58_000535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675055.1"
                     /translation="MTVHPLAFAALLAGLLAGCASPASKTTADEPRPPSIAAGMSPVP
                     AFTGGGAGWSIEIASTGNGNHDASLSADGRTQKGTLRYLGQPADAPSSLIVLNGELGR
                     QPAVVEIKRESCRNAEGVDTLASVQVTMEGQPQRRGCGHLAVY"
     gene            complement(14026..15768)
                     /locus_tag="QEL58_000536"
     CDS             complement(14026..15768)
                     /locus_tag="QEL58_000536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019337056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HDS1675056.1"
                     /translation="MAGKVSPIGLRTWVWILAGLFVVCTLPLMVIALVQGTMRYAAAE
                     DNLVSLRQLRQTFDLANLVSSERGPANSLLGARADDSTEQARLAMQLAVVRRRVDAAM
                     LQLDTAFKAHPGEVDAHAMLADAQRRLKSARASVDRVAAQPQDARRVEDVERAISSMF
                     AVVDRLHLLTSAQINVLVRADREAAIPAMQGQVLIDLREHGGRLASNVMAPVAVPGAW
                     RNEQVRAALQTEGRLLELWRLAGSHEAVFRSDPALSWHWDMARRQFFGESLPMVEQLI
                     EGGRRGVPPPWTAAEFTRRYVPTLQSLEALRDGYLSVSIARFEHTRNRAAMRLAVLVA
                     TVVGTLVVLGVALRIAHVQILRPLLQAQRQVIQIASDAPGPEQHVTHPLAEMQRLFDA
                     IEVLRETSRERSALTSELRQLAGTDELTGLLNRRALDQRVQQRHAEGAAAAVVILLDV
                     DRFKSINDGHGHDAGDEVLVQVAQLLQRHLRRSDSIARYGGEEFLVLLADGDLDAGRR
                     LAESLRLALQQLDIRVGGGTVLRVTASFGVAEGGTDALGWRTLLRAADAAMYQAKAQG
                     RDRVRVAGGGRTSR"
     gene            complement(15929..16954)
                     /locus_tag="QEL58_000537"
     CDS             complement(15929..16954)
                     /locus_tag="QEL58_000537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014036321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HDS1675057.1"
                     /translation="MQDALVVQPKPPVPRIAAWLMMLLGMWLALKLGLVVTLLSGLLV
                     FQLTHLLASTVEGRLPPGRARAIAVIVLSAVIISALVLAGIGVASFFRNETGGPDALL
                     ARLMEILNSSRHQVPALLQPYIPEDMPALRAALNDWAAEHQRQLGVAGTSVVQVGVRV
                     LIGMVLGAMIALYDELPLPKMGPLAQELIGRTSRLATAFRQVVFAQMKISLLNTVFTA
                     IFLLGVLPLFGVHLPLSKTLVLITFIAGLLPVVGNIISNTIITIVALSVSFYVAVAAL
                     LYLIVIHKLEYFLNARIVGGEIQARAWELLLAMLVMEAAFGLPGLVAAPVFYAYVKRE
                     LVDQRWI"
     gene            complement(17036..18103)
                     /locus_tag="QEL58_000538"
     CDS             complement(17036..18103)
                     /locus_tag="QEL58_000538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HDS1675058.1"
                     /translation="MPFLTDSTEVAVEGIGAARRIGWMRFVGNGLGAIPIASIILERH
                     DGALAWVLLLLNALAWPALALLLTHRSRQPAVIQFRCMVADSLFGGGWIAFMGLSAVP
                     SALFAALLVADKIAAGGVRLAMRATLALVLGFAITWWALGFPYQPVTSQRTIVLSVPF
                     LFVYGIGLSILSWQLARRVKSQNRQLQRLSRMDPLVELANRGFLILRAQQALDKAQRQ
                     GGFACLLMLDVDDFKRINDSHGHRAGDEVLRHIASTLRAFARPGDTPARLGGDEFVVL
                     LYDCAPVDAMHVAERVRLHLLEAARQATPGVEFSVSIGIAATPRGGSVEDWLAQADRA
                     LYHAKRQGKNNASYGEHGAAQ"
     gene            complement(18220..19254)
                     /locus_tag="QEL58_000539"
     CDS             complement(18220..19254)
                     /locus_tag="QEL58_000539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HDS1675059.1"
                     /translation="MATIYDIAKHVGVSAGTVSRALSRPDKVLPATRARIEQAAAALG
                     YVPNTVARTLKTQRSGKILVTVPDIANPFFAQILQGAEEAAQAVGYAVLLGDTQHQPD
                     REERYAQMLRRNEADGMIVLGHRLPPTAREIVQQRGAAAPVVNGCEFDPALGIPSVHI
                     DNAAAARAVMEHLYGLGHEQIAVVGGPPDNPLHQQRLQGVRAAGKARGRLRQQRIVPG
                     DFSVESGHAAAMALLDVAPAPTAIFCFSDQMALGALAACRERGIRVPDDLSIVGFDDL
                     ASSRYLTPPLTTIRQPMREIGERAVKLLLAIIEHADVQLQQTLDFSLMLRGSTAAPRP
                     GRDLDPLIPN"
     gene            19350..20402
                     /locus_tag="QEL58_000540"
     CDS             19350..20402
                     /locus_tag="QEL58_000540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate isomerase/epimerase"
                     /protein_id="HDS1675060.1"
                     /translation="MKTLKGPALFLAQFIGDKAPFDRLDTLAGWAAGLGYSGVQVPTT
                     APHLFDLAKAAHSQAYCDDVAGMLAGHGVQITELSTHLQGQLVAVHPAYDSLFDGFAP
                     PAVHGNPAARQAWAVDQLMLAAKASQHLGLTAHATFSGALAWPYFYPWPQRPPGLVDE
                     AFAELGRRWRPILDAFDACGVDLCFEIHPGEDLHDGATFERFLDVVDHHPRAKILYDP
                     SHLLLQQMDYLGFIDRYHPRIGIFHVKDAEYRASARSGVYGGYQDWIDRPGRFRSLGD
                     GQIDFKAIFSKMAQYDFPGWAVLEWECCLKHPEDGAREGAAFIRDHIIRVTERAFDDF
                     ADSGTDAASLHRMLGI"
     gene            20430..21647
                     /locus_tag="QEL58_000541"
     CDS             20430..21647
                     /locus_tag="QEL58_000541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005415643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside permease"
                     /protein_id="HDS1675061.1"
                     /translation="MTHAMSRLGAMMFLQFFIWGAWFVTLGTYLVQGPLQASASQVAT
                     AFLSQSIGAIVAPFLVGLIADRYFAAQRILAVLHLAGAVLLWLASTATDFTTFSACVM
                     GYMLLFMPTLALANSVAMRHMQSPEKQFPLVRVAGSIGWIIAGVLIGWMGWEQAHRLE
                     LTFQMAALASLLLGLYAFTLPHTPPLARQRDAGLGQILGLDSLRLLKSRSYLVFFLAS
                     IAICIPLSFYYNFTNPYLNDLGVRGAAGLQSLGQVSEVLLMLAMPFLFVRLGVKTMLA
                     VGMAAWVVRYGMFAFGDAGSGFSLLVIGIVLHGICYDFFFVTGQIYTDAHAGPDARSS
                     AQGFITLATYGVGMLIGTFLSGAVVEHYTTAAGPDWQQIWLFPAGVALIVLIAFLLLF
                     RDRPVVAAAASTH"
     gene            21660..22784
                     /locus_tag="QEL58_000542"
     CDS             21660..22784
                     /locus_tag="QEL58_000542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012479399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HDS1675062.1"
                     /translation="MPKPGIAIIGTGMIAAVHRRAALLAGADIRGVAASSAQRAAEVA
                     QAWGVPRGYRDIEEVVADPQVQVVHVCTPNHLHRAMAEAALRAGKHVVCEKPLATTLD
                     DAQALAALANSSGLVATVPFVYRYHPVVREARARIAAGDIGPLHLIHGSYLQDWLLDP
                     ASNNWRVDPALGGASRVFADIGSHWCDLVEWVSGERFAEVSAAFDTVIAERSASGAQS
                     FSTPAAGGAMQAVASEDVAASMFRTGNGTLASLTVSQVSAGRRNRLWFEIDGARASVA
                     FNQEDAERLWIGWPDQREETFVRGPGAGSAEQRRLSVLPAGHAQGYAQCFEAFVADTY
                     RAIDGERPEGLPTFDDGLRSALIVDRVITSARTRAWTTIA"
     gene            22804..23670
                     /locus_tag="QEL58_000543"
     CDS             22804..23670
                     /locus_tag="QEL58_000543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008268323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate isomerase/epimerase"
                     /protein_id="HDS1675063.1"
                     /translation="MKAPVRRTAGLVLLLLAALPAFAGEVAGTQKPIAVQMYTLRNAG
                     SLEQQLKIVHDAGVHAVETVGTQNTSAADLKQLLDRYSIRAISSHVPLAELRNNLDGV
                     VTFNRAIGNSTLVVPYLDQKDRPADAAGWTALGQELGRIAKQVRAKGMYLAYHNHDFE
                     LVDFNGRTGLELLFAAAGPDLQTELDLAWVARAGLDPAVMLGRFRGHVFAVHAKDNAP
                     KGQAEDEGGFAAVGQGVLDWNAILPAAAAAGVHWYIVEHDQPRDPAKVIQTGADYLCE
                     HLTVNAPARAQP"
     gene            23689..23985
                     /locus_tag="QEL58_000544"
     CDS             23689..23985
                     /locus_tag="QEL58_000544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012479397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HDS1675064.1"
                     /translation="MKMILAMAVALGGLGSATSAWCKDDPAAGAKLYTANCVACHGAD
                     RAGMPGAFPALTDIGKRMAPAQIKEKISKGGGLMPPFSQLSQQEINDIASYLAK"
     gene            complement(24016..24789)
                     /locus_tag="QEL58_000545"
     CDS             complement(24016..24789)
                     /locus_tag="QEL58_000545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1080 domain-containing protein"
                     /protein_id="HDS1675065.1"
                     /translation="MGDQLMERCMMIKPLLIAAGVLAAGSVFAQEGADPARDPKKTEV
                     WTPVPATVATPPGKAPSDAIVLFDGKDVSAWESEQGGQVPWKVADGAMTVVPGSKGIR
                     TKQRFCDVQLHVEWRTPIDTKGFDGQNRGNSGIFLQELYELQVLDSYNNPTYANGQAG
                     SIYKQAMPLVNASRAPGQWQAYDILWKAPRFSAGGGLVSPARITVLHNGVLVQDDTVL
                     AGRTEYIGAPSYAPHACAPLYLQEHDSRVSYRNIWVREL"
     gene            complement(24774..25349)
                     /locus_tag="QEL58_000546"
     CDS             complement(24774..25349)
                     /locus_tag="QEL58_000546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005415638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconate 2-dehydrogenase subunit 3 family
                     protein"
                     /protein_id="HDS1675066.1"
                     /translation="MDRRELLKMIVAATGAAMVGLPALVEGKAPAAGAMPAFSDADIA
                     LLDEIAETILPRTKTPGAKDAGAGPFMATFVADCYTARQQATFRAGLSDIDARSGGRF
                     ASLTPDARNTLLRTLDAEAKARTAEVTETGTPEEGEAMPHYFTMLKQLAIFGFFTSKV
                     GATEVLHYVAVPGRYDGDLAYVAGTPAWGTS"
     gene            complement(25349..27034)
                     /locus_tag="QEL58_000547"
     CDS             complement(25349..27034)
                     /locus_tag="QEL58_000547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014646299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase"
                     /protein_id="HDS1675067.1"
                     /translation="MADNHYDAIVVGSGISGGWAAKELTEKGLKVLMLERGRNIEHVK
                     DYVNAMKEAWDFPHRNRPTQAMKADFPVLMRDYGLAENLEGMWANEQDSPYIETQRFD
                     WFRGYHVGGRSLLWGRQSYRFSDLDFEANLKDGIATDWPIRYADIAPWYDHVEKFAGI
                     AGTREGLDVLPDGEFLPPIPLNIVEKDVAARIKKAFGGTRHMIHSRTANITQPMPEQG
                     RVNCQYRNKCILGCPFGAYFSTQAATLPAAMKTGNLTLRPFSIVKEVLYDKDRKRARG
                     VEVIDAETGQTYQYTAKVIFLNASSFNSTWLLMNSATDVWEGGLGSSSGELGHNVMDH
                     HFGAGASGRVEGYEDKYYFGRRPCGFYIPRFRNVAADKRGYLRGFGYQGGASRTGWSR
                     EIAELNIGADLKDALTVPGDWRIGMTGFGEMLPHHDNTIRLDRERKDKWGLPVLAMDV
                     AMRANELAMRKDMAADAAEMLEAAGVKDVKMHDNDYAPGKGIHEMGTARMGRDRKSSV
                     LNQHNQVWDAPNVYVTDGACMTSSACVNPSLTYMALTARAADHAVRELKAGNL"
     gene            complement(27062..27958)
                     /locus_tag="QEL58_000548"
     CDS             complement(27062..27958)
                     /locus_tag="QEL58_000548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIM barrel protein"
                     /protein_id="HDS1675068.1"
                     /translation="MSIHSIRPAPATGLTRRDALRFAVAGGIGLGAAGVLPAFAATAA
                     LKGNLKHSVARWTFPQLSVAQLCTTVKDIGFAAIDLVGPEDWPTLKAHDLYSSMCNGA
                     ELGLTQGFAGRQFHDQLVERYTRHIDLVADAGYRNLICFSGNRNGMDPQDGMANAEAG
                     LKRILGHAEKRGVVLVMELLNSRVDHHDYLCDHSAWGVELCQRLGSDNFGLLYDIYHM
                     QIMEGDIIATIGRHHACFKHYHTAGVPGRHEIGDQQELHYPAICRAIRDTGFEGYLAQ
                     EFMPAAPDPINSLREAIRLCDV"
     gene            complement(28159..28743)
                     /locus_tag="QEL58_000549"
     CDS             complement(28159..28743)
                     /locus_tag="QEL58_000549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019301685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HDS1675069.1"
                     /translation="MARGINKVILVGNLGNDPDVKYTQGGMAITRISLATTSVRKDKD
                     GNQQERTEWHRVVFFGKLGEIAGEYLRKGSSVYVEGSLRYDKYTGQDGVEKYSTDIIA
                     DEMQMLGGRGEGGGGGGGGGNYGGDRPQRQQAPRQEYGGGGGGGGQRGGQGGGYGNQG
                     GNQGGGYGNQGGNQRPQPQQAPPMDDFADDDIPF"
     gene            29036..30067
                     /locus_tag="QEL58_000550"
     CDS             29036..30067
                     /locus_tag="QEL58_000550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014646297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HDS1675070.1"
                     /translation="MIIKGKATSLDIAHLAGVSQPTVSRALRGSPMVNAETRERILRI
                     ARELNYKVDKNASSLRLRNAGTLALLFFEDPTNDDSLINPFFHSMLGSITRACALHGQ
                     DLLVSFQQLSTDWQADYEDSNKADGIILLGYGDYHESRDRLQRLVEQGTHFVRWGAAL
                     PGQPGVSIGSDNFQGGHDITTHLLQQGCRRIAFLGHASSHYPEFQERYRGHVAALQER
                     GLSAEPALQHDAITTEASGQQACQALLARGEPIDAICAASDLIAIGAMRALREAGLRV
                     PQDVAVTGFDDIPLAASVSPALTTVQQDTKQAGQLLVERLLALIGRQPVDSQSIPVKL
                     VVRDSSQRG"
     gene            30197..31099
                     /locus_tag="QEL58_000551"
     CDS             30197..31099
                     /locus_tag="QEL58_000551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012479390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDS1675071.1"
                     /translation="MLKIDSLSKTYANGVHALNNVSLDIPRGMFGLLGPNGAGKSSLM
                     RTLSTLQEADSGTATLSIPGEAPIDVLRDKDAVRRRLGYLPQDFGVYPKVSALDLLEH
                     FAVLKGLTQRAQRHEVVDGLLQQVNLWDARKRKLGTFSGGMRQRFGIAQALLGDPRLV
                     IVDEPTAGLDPEERNRFLNLLAAIGENVAVILSTHIVEDVTDLCPTMAIMNKGQVLLT
                     GRPAEAIDALQHQVWRKQVDPSELADHEARYVVLSTRLVGGRPVIHVHSANDPGDGFA
                     AVAPDLEDVYFQRLRLQARARAAA"
     gene            31112..34696
                     /locus_tag="QEL58_000552"
     CDS             31112..34696
                     /locus_tag="QEL58_000552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004147720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HDS1675072.1"
                     /translation="MILNFFRFELREQLRSPLLWLLAGLFALLAFAAASSDAVQIGGG
                     TGNVHSNAPTVIAQMLGIFTLLGMLVTALFVSNALLRDFELGTAELIFASPVKRRDYL
                     AGRIAAALAAGLLVYVVIAFGLWLAPFMPWVDPERMGPISWRGYAWTFAVIVIPNLLF
                     TTALLSLLAALTRSILWVYIGLVAYLVLYGASAALLRDIDNTWIAVLSEPLGMRALGR
                     TIRYWSTAERNSGIPELAGYLLANRALWLGVAALLFAATFALFRTERSGSGRRRWGRK
                     PILPAADAVAVRPARADLPRVVPAFTATTAWQQFLRQVRFDTGGVLRSVPFIVLLVMG
                     LANFLPSALFRQTLYGTSIWPVTSQMIMGLQGAFSWLLVIIVLFFAGELVWKERSARI
                     NEVTDAMPVPNWVPLLAKFTALLAVIICFQAAGALAAMGVQLAKGYTHLEPLLYLRSL
                     ALDSVVYILMGGLALVLQVLTNNKFVGYALLIVVMIGQGVLGMLDYTQNIYNFGSWPI
                     APYSDMNGYGHFLTGQLAFQGYWALFLLTLMCLASAFWVRGVSQGLRQRLALAGRRLR
                     GPTGALAGLAALAFIGVGGWLYWSTNIRNEFISPDQQLDLQARYERELSKYRNLPQPR
                     IVAVDNRVDLFPESQSMVIDANWTVRNTHAVPIQDVHVSMGDDRQLVAVDLGGQTLSM
                     HDADLGYRIYRLATPLQPGEARGVHFRVVQKPNGITAGQAPSNIVDNGTFFNSRVLPS
                     FGYNEGAEISDRNERRKRDLGEPRRMPRLEDQAARANTYISNDADWLDFRTTVCTAPD
                     QIALAPGYLKHETTVNGRRCFSYAMDRPMLNFYAYLSARWEVRKATYKDIPVEVYFDP
                     AHGYNVDRMIEAVQKSLAYYESNFTPYQHRQVRIIEFPGYARFAQSFANTIPYSEAIG
                     FIADLRDPDKVDYVFYVTAHEIAHQWWAHQVIGANVQGATVLSESLSQYSALMVMEQE
                     YGRQHMRQFLKRELDGYLSGRGGEAIEEQPLERVENQQYIHYQKGSLVFYRLREEIGE
                     QALNRALKRFLQDKGFQQPPYTTSRELLGYIRAETPADRQQLVTDLFEKISFYDNRVM
                     AASARKRDDGRYDVTLDLHAAKQYADGKGKESDGKMDDWVEIGVFANGPSGKERDQKV
                     LYLQRHHITGAAPKITVTVDGKPDEAGFDPYNKLIDRVSSDNRRKVTM"
     gene            complement(34781..35074)
                     /locus_tag="QEL58_000553"
     CDS             complement(34781..35074)
                     /locus_tag="QEL58_000553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005412552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675073.1"
                     /translation="MSVHATRHSRSALIFLVTAIVAALVSMPVLRAVGMVLWPVFVIA
                     WLINLGAAWHLAQWARQQGRSAWAFGLPAALGTVASIVVFVLLAVLGPKPPVR"
     gene            complement(35071..35535)
                     /locus_tag="QEL58_000554"
     CDS             complement(35071..35535)
                     /locus_tag="QEL58_000554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDS1675074.1"
                     /translation="MEFRVLPAGAPERQQLAQWYHAQWGRDAGLSLEQELQRLNPVQD
                     ADGFPHLIAAFDGGQLVGAVQLKRREMQAFPQYEHWLGSVFVAESHRGRGLASGLVEQ
                     AVTQAAQMGVCELYLQTEALDGGLYSRLGWMPLQEADNRNYRVLVMVRRLSS"
     gene            complement(35649..36035)
                     /locus_tag="QEL58_000555"
     CDS             complement(35649..36035)
                     /locus_tag="QEL58_000555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SseB family protein"
                     /protein_id="HDS1675075.1"
                     /translation="MTDLAPQTPIETLLKAAMDGAVPIRAFMEAFVASEVVLLTGSLI
                     TPDGSGFDPLLFDKQGTLHVAVFTDPSRVGIYSQQAPHQIRWLMLDVLRRVPGGYGVV
                     INPGTPLGFEISPSGVGEILKDFAQG"
     gene            complement(36174..37889)
                     /locus_tag="QEL58_000556"
     CDS             complement(36174..37889)
                     /locus_tag="QEL58_000556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005408457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclomaltodextrin glucanotransferase"
                     /protein_id="HDS1675076.1"
                     /translation="MRGALSVAVSLVLLAGHAAAAPRPDYVGTTEPFASDAVYFVVTD
                     RFVNGDPSNDHRDQGGTHRTFDIPVPCPDKVDGNIGYLGGDFRGVLDNAQYIRNLGFG
                     AVWITPIVDNPDEAFTGSKPISCTSTLTDRGKTGYHGYWGINFYKLDEHLPSKDLDFA
                     GLTKGLHGAGLKVVLDIVGNHGSPAWTMPTRQPQFGQIFDKDGKLIADHQNLPPQKLD
                     PKHNPLHAFYNSIGPVDSKDGSIFDGNLAELSDFNQDNPAVMDYLVGAYLQWTAQGVD
                     ALRIDTIGWLPHPWWHAFVKRIRAEHPGMFMFGEAFDYNAASIAEHTWPANANVSVLD
                     FPLRGALEQTFGTAGKGFETLAEPLHLSGGPYANPYELMSFYDNHDMPRLQANDNGFI
                     DAHNWLFTARGIPVVYYGSETGFMRGRAEHAGNRAYFGQPRVDAAPQSPIFAPLQRIA
                     RLREATPALQRGLQVNERLQDDEAVFFRVLQHGDVAQTALVLLNKGDRAKAFSVARFV
                     QAGRWRDALDGGELKVKEALTAEVPAHGVKVYVLEAAVQQPALQVELDKAMADQRARD
                     QRLGR"
     gene            complement(37889..39376)
                     /locus_tag="QEL58_000557"
     CDS             complement(37889..39376)
                     /locus_tag="QEL58_000557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005415622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDS1675077.1"
                     /translation="MNRPAKPQLSFWQIWNMCFGFLGIQFGFALQNANASRIFETLGA
                     DMDAVPGLWIAAPLTGLLVQPVIGYLSDRTWTRWGRRRPFFMIGAVLTTLALLVMPNS
                     PTLWIAAGTLWVLDASINVSMEPFRAFVGDQLAPRQRPAGYAMQSFFIGVGAIVASFL
                     PFLLAHFGVANTAAAGEVPDTVRYAFYFGAVVLLAAITWTVLSTREYSPAELAGFEDA
                     EPPAHHAGTAVIGPASWGQVALWLGIGVLLALLIAWRQGDKMLYVLAGLCAGYGLLLA
                     LARALPGTHMLAAIVGDLRAMPVTMRRLAWVQFFSWFALFAMWIYTTAAVAGTHFGST
                     DPQSVAYNEGANWVGVLFGAYNGFAALAAVLIPPMVRVIGLRWSHLVNLWLGGAGLVS
                     LMFIRDPHWLLLSMVGVGFAWASILSLPYALLSDSVPASKMGVYMGIFNFFIVIPQLV
                     AASALGFALRTWLGGQPMHVLVLGGCSLFVAGLCVLRVPSHPEVV"
     gene            complement(39373..41565)
                     /locus_tag="QEL58_000558"
     CDS             complement(39373..41565)
                     /locus_tag="QEL58_000558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Six-hairpin glycosidase-like protein"
                     /protein_id="HDS1675078.1"
                     /translation="MLKIICLTAALGAALGSTAQAADLQFHGRQARAEAAAGGSFVLH
                     APKGAVQIAAAPMRSQTGSVMFDALFALAQQEMDQDRVDAIRDPAFDEGRPVPCECFQ
                     TGARWPYVWTRDVSFAADLALARLDPQRTRQSLQFKLSAARDGHTLGLFVAQDTGSGG
                     SWPISSDRVVWFLAARHLLDDPAFADQVWQALQGTLAQDRAMVFDAQMGLYRGETSFL
                     DWREQTYPEWTREDVRFIGDSYALSTNVLHYQALRLAEQLAGQQGDARAADYKGWADA
                     LAKQIDARFWREDIGQYMSYIGEAAHPVPYAKVDLLGLSLGILADVLPAERARRALAA
                     YPMGPAGSPVVWPQEAQQPIYHNRAIWPFVSAYSLRAARQLDDAPRIAAEIRSLMQGA
                     ALAGSNMENYELVSQAVHVDEGKLSGPVVNSERQLWSVAGYLSMVIEGVFGVQDDGRM
                     QPKLPAVLVPELFGAQRRISLEAGAKRYVLERPASLGDGLLVASSTQTHGNTTTVQLV
                     AAPAAAGGRGMTADANARAPATPPAPQATRAGAGWIVPVAADQRLWMDGKQVAASNGQ
                     VRVSDDGLQHCLSLTRREGALESLHGPTVCVGPQQLLQGEQRWQFTSANAGRVRLRLQ
                     YSNLNGPINTGVTAAVKQLVLHCPGQPMQKQTVTMPHSVAGQDSTSATFTVPRGQCMV
                     TLEEGFNMSALQHFAHYTGGKGGREGVLNQAQVQALKVAQVATEEEAR"
     gene            41802..43853
                     /locus_tag="QEL58_000559"
     CDS             41802..43853
                     /locus_tag="QEL58_000559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005408454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 97 protein"
                     /protein_id="HDS1675079.1"
                     /translation="MPMSPTAVRPVLALVFGLALLGMAALAQAAPQVVSVESPGKVLK
                     ASLVLDGGTARYRVERFGETVVEDSKLGFALRDGRLDRDFTVIGQQQRSVDESWEQPW
                     GERRVSRNHFNELTVRLAETTGSKRRLDVVFRIYDDGLGFRYVFPEQPNLREAIIDDE
                     LTEFAIAPESTAWWIPAGEPIHYEYLYQRTPLREVPLVHTPMTLRSRDGLHVAIHEAA
                     LVDYAGMWLRRTEGQRLRAQLSPSAEGWKVRRALPFATPWRTLQIADRAGGLVESDLI
                     LNLNEPNALGDVSWVKPAKYLGVWWSMHLDNESWASGPKHAATTAKTKKVIDFAAAHG
                     FRGVLVEGWNPGWDGMWVGNGYDFDFTRATPDFDIEALSAYGLKKGVHLIGHHETGCA
                     IEHYEDQLDAALDLYARLSVDQFKTGYVCDDGQVDRRNPSGGPLWREWHDGQFMARHH
                     LKVVQEAARRRLSVNPHEPIKDTGLRRTYPNWISREGARGMEYNAWGQPPNPPEHEVN
                     LVFTRMLAGPMDYTPGILSLKGRHGQAIPSTLARQLALYVVLYSPIQMAADLPEHYLQ
                     HREAFRFIEDVAVDWEQSRVLDGEVGDYVTIVRRDRNSRDWFLGSITDEHGRVLPVSL
                     GFLEPGVRYRAEIYRDGEGADFRANPFAFVRESREVTSADALTLVLAPGGGQAIRFTP
                     L"
BASE COUNT         7474 a        15219 c        14252 g         6915 t
ORIGIN      
        1 gcatcgcggc gttggaacga agggcagtcg agcatggctc gactctacag aggcctcaat
       61 cgccgcagct gccgccgtca ctgccaccac catcactgct gcagtcggag ctgctgtggc
      121 cgtgatggct gtggttgtca ctggaagagc cgcccgagta gtcgtaggcg ccgccgaggc
      181 cgttatcgcc ccggctgccc gagccatcgg cggtggccac cgccatgcac aggatcgcgc
      241 cgaccagcgg cagcagccag accagcagca gctgcaccgt gcggccgcct gccgacaggc
      301 cgtcgcgccg gacgatgagc accgtggcga ccagattcag gcccagcacc agcaggacca
      361 gcagaagggc gaggatcagc atgcggcggt tccgtgcctg gactggccgc attatgccgc
      421 cccgccccgg cattggccct gcctgtcatg aagatgggac aatgtagggc gcgccggcct
      481 gccccgtggc cgccggcgcc ccccgcacca cacggaagaa gaagaacaac aacatgctga
      541 aagtcatttt cgataccgac ccgggcgtcg acgacgccct ggccctgctg tacctgcaca
      601 agcacccgca gatcgacctg atcggcgtca ccaccacctt cggcaacgcc tcggttgaat
      661 cgaccacgca caatgcgctg tacctgaagc agacctgggg ctttgccgcc ccggtcgcgc
      721 gcggcgcggc aggcccgctg cagccggaag ccaccccgga agcgtggccg gtgcacatcc
      781 acggccacaa cggcctgggc aaccacccgg tgccggcgca gctggacgtg gccgccgacg
      841 cgcgcccggc cgcgcagctg atcatcgatc tggtccgcgc ccacccgggc gaagtgaccc
      901 tggttgccgt gggccgcatg accaacctgg cgctggccct gcagcaggcc ccggacatcg
      961 ccggcctggt gcgcggcgtg gtgatcatgg gcggcgcctt ccacgtcaac ggcaacatca
     1021 ccccggccgc cgaggccaac atctggggcg atgccgaagc ggccgacgtg gtgttcacca
     1081 ccgattggcc ggtcaccgcg atcggcctgg acgtgaccac ccgcgtggaa atggaccgtg
     1141 acggcctgga cacgctggcc gggatcggcg gtgccgacgc cgagctggtg cgtgcgctgt
     1201 cgcaggacta cgtggacttc tacctgcagg ccggccacaa gggcatggtc gtgcacgact
     1261 gctgcgcctg catcgcgctg acccgcccgg aactgttcca gttcgagcgc gccagcgtgc
     1321 gcgtggccac cgacggcgtc gcccgcggca tgaccattcc caagccggaa ggcatgggct
     1381 tcggccccag cgtgtgggat gggcacgtgc tgcagtctgt cgccatcggc gtggatgcag
     1441 ccgccgtact ggccgacatc gagcagaccc tgaaggtctg atcggctagc gcctggacct
     1501 gcccgggacc gtctcgggca gggtccacag caccggcagc accagcaccg ccaccaacgc
     1561 gatcatcgcg cccggcgctg ccgcccagcc gctgcgttgc acccaccatt gcgccaacca
     1621 cggtgtcgca ccgccgaaca cggccgtagc catggtcacc cccagtgcca gcccgctgac
     1681 ccggccttcg ccggggaact gctcggccgt ggccggtgcc gccaccgcac tgacgccacc
     1741 ggccacgcag gccagcagca ccgccgccag cgcgatgccc catgccgttg cctgcgccat
     1801 ccacgcgaac agcgacagcg gcagcagcgc cgccagcaca gtcaggccca acagcatcgg
     1861 ccgtcgcccg acacggtcgg acagtgcgcc gcacagcggc gtgatcgcga tcaccgccac
     1921 tgccgcaatc gtcgacaacc acagcgcgtc gccttcatcg tggccctgtg catgcaggaa
     1981 ggccggtacg taggtgatgc ccacgtagta ggtgatcgag cccagtgcgg agatcgcaaa
     2041 ggtacgcgcc accgcccgcg gatgatggcg cagcacgtgc cgcaacggcg tggccgggat
     2101 gctgccctcg cggcgctggc gctcgaactc gggcgactcg tgcatgcccg agcgcgcgac
     2161 gaggatcacc agcgccagcg ccgcgccgac gaagaacgga atgcgccaac cccagctgtc
     2221 cagctgcgca ggtgccagca gcgccaccgt cgccgccgag atcgccaccg ccagcagcgc
     2281 accgacttca ctggctgccg acgccagcga ggtcaccagg ccgcgtcgcc gttccggcgc
     2341 gctttccagc agatacgcga ccacaccggt gtattcaccg cccaccgaga acgccatcac
     2401 gcagcgcagc accagcagca gcacgccggc ggtggtgccc gccgttgcgg cggtcggcag
     2461 cagggcggtg gccagcatcg ctgccgccat cagcgccatc gaggccagca gcatccagcg
     2521 ccggcccagc cggtcaccca ggtggccaaa gcacagcgcg ccgagcggac gcatcaggta
     2581 ggacaccgcg aagccggcca gggtgaccag catcgcctgc tcgccaccgc caaagaacac
     2641 ccgcgacagc accgtggcga agtacaggta cagggtgaag tcgtaccact ccaccaccgt
     2701 ggacaggccg gccacccaca tcgagcgctg ccgcgccacg gtcatttcat tcatgggcgg
     2761 agggtgtcat gcgccgggtg aaacgcgggt caggaccggc ctacatggcg cggaacgcac
     2821 ccagatagcg gcggctgacc ggcagtacgt catcacgacc gcgcaggtac agctgggcgg
     2881 tctcgttgtc accgcgcacc agcagcttca ccgcgtgccg gttgaccacc gccgagcggt
     2941 gcacctgcac gaagctgtcc ggatccagct gttgcaccag ctccttcagc gacatcgcga
     3001 tcaccgcctc gccgggacgg ccatcatcat cgcgccagcc gacctgcgtg tacttgctgt
     3061 cggcgcgcag gaaatccacc gcgctgcagg gaatcacccg cagcacgttg ccaacctgcg
     3121 catgcagcca gcgcagcggc gtcggcgccg gcagcgacag gcgttcggcc agctgctgca
     3181 actgcttctg caggtcctgc aggggcagag gctgctgcag gcgctgctgc agccgttgca
     3241 ccgtatcgtg caggcgctgt gcatccactg gcttgaccag gtaatccagc gcgccctgcg
     3301 cgaacgcctg caccgcatac gcatcgtagg cggtgacgaa caccacctgc gcgcgccgcg
     3361 cgatgcgtgc ggcgacgtcg atgccggaca ggccgggcat gtggatgtcg aggaagcaga
     3421 cctgtggctg cagggtttcg aaggcctgca gcgcctcgcg cccattacgc gcctgcgcca
     3481 ccacctgcag ctgcggccaa gcctgcgcca gctgtgcggc cagcgcctgc cgcagcaacg
     3541 gttcgtcgtc ggcaatcagt gcgttggcga tcacgcgggc agctcccgcg ccggcaaccg
     3601 caggcgcgcg atcgcgccgc gctctgggcc cgcctgcaac tgcagggacg cggcatcgcc
     3661 atacagcagc tgcagccgct ggcgcagtgt ctgcaggccg gtgcccaggc ccggcgccac
     3721 agctgacagg cctcggccgt cgtcaaccac gcagacctcg caacacgccc cgtcgcgccg
     3781 cacctgcacc accacctcgc caccgtcttc gcaggggtcg atgccatggc ggatcgcgtt
     3841 ctccaccagg gtcagcacgg acaggcccgg gcaacccagc gcgcgcacct gctcggcaac
     3901 atccaggcgg aaccgcagcc gatccggcat ccgcatatgc atcagttcca gataggcgct
     3961 taccaatgcg atctcgtcct ccatccgtac caccggctgc tgcaggcgtg gcacgctgcc
     4021 gcgcaggtag gccaccagat ggcgcatcac caccgatgcc tgcggtgaac cgctgtccac
     4081 cagcgcctgc aggttggcca gggtgttgaa caggaaatgc ggcgcaacct gccgttgcag
     4141 cagctgcacg cgagcttcca gcgcctgccg ctccagctcg ctgcgttcca gcgcgaaggc
     4201 cagggcctgg tgccgtgcca gtgcgtcctt gtgcctcacc agtgccgcca gcgccaccca
     4261 cggtgcaacc agcaggccaa ccacgttgag ggtcaggaac ccggtccagc gatctgcgtc
     4321 ctgccagaat ggcggtgcgc ccgcgtcggt gcccgcaaga tagatcatca gggttcccag
     4381 cggaatcacc gccgccaccg cgaggatctg cacgacccag cgtgacagcc accgcggcag
     4441 cgatccgggc cagcgctcca gcacggtgaa caccagcatc gccgccaggc ccaatgccag
     4501 cgcgcgcggc agcaccgtcc accacggatg ccagtcgatg accagcagcg cgccgagcgc
     4561 gagcgagatg cctgcgcacc acagcgttcg gcgcagcagc gaaaccggcg gtggcgacag
     4621 cacatcggac atggccggca gcatagcgcc ttgccgtgca cccacgtcag ccggccgcaa
     4681 gcggtggcca ccacatcagt gccgccgcgg cgaggctgcc ggccagggtg gccacagccg
     4741 caaccagcag gaccacgccg acccgccagg catgcgccgc ccctgcagag cgttgggcac
     4801 gcagatacag ttccagcact gccaggggca gaagggtctg tgcaaacgcc agcacggtca
     4861 acgcggggcc ggtgaaggtt tccggatcga aacccgccgg cccctggttg agcagcagcc
     4921 acagcatcag gccgatgcgg aagaaccaca cgccccccac cgccaggaac aggcgcagcg
     4981 cccatgcgcg gtgctcaccc agacgttgct ggcgtgcgcg ccaccacgtg gccaccgcga
     5041 accacaggat cagcagggca ttgagcgagg tgcccagatg ctgcgaaaca tcaccggcag
     5101 cgccaccgcg gacccacacc atcgccaggc cacccagtgc cagcagtacc gcggccaaca
     5161 cgtagagccg gccgttccag cggtgcacgg ccggtgccca gcgccgcagc gctggccaca
     5221 actgcaacca tccccccagc acgatgcccg ctgccagcag caggtgcagc gccagcacgg
     5281 cgttgaaggt ggtcgccccg gcgacgtaac cgtgcggcat cacctcgttc cagcgcagtg
     5341 gctggcccgc cagcgtgctg cgtccgtaga agcccacgat gtagacggcg aacagcagct
     5401 gcccgagtgc ggcactgccc aaccaggcca gggctccgat acgcagcagg cgctggcggc
     5461 gcgatgcggg cacctgcccg tcgcgcagcg cccggcgtgt ggtgatggca acagcaggca
     5521 aggacatggc agcgcttcct tcagggagtg cgccattgtt ggtcgttgcc acgggcatgg
     5581 aggcggtgac cgcgatcagt gacggccagc gccgaccagt gacgccaggc ggcgatcgct
     5641 ggtttggcaa ccctgttccg gtcagggaga tgcggctgcc tgcatgtact gggtttcatg
     5701 gccggtgaag cgttcaccgt caaagccgaa gcagaagcgg ccttcctcga acacgcgata
     5761 gaccagcaac gcgccatcga ggcagaactg cggctggtcc acgcccgtct ccagagtccc
     5821 gtagccggta gcctctccgc ccttccccgc tgctccggtg aaggcatcga tcggcagcgg
     5881 tgttgcctcg ccggtgcggg tatcgaccag caccaccgtg cgctggaagt actcagggcg
     5941 atcatcgatc tgcaccagca gatagtgctg gttgaaattg ggcttctggt tctgcagcgc
     6001 atcctcgatg cgcgcgcgat gccgcgcatc gcagaagtcg accgggctgt agcggtagct
     6061 gcaaccgtcg tggtcgtagg gcaggttcat gccggcatag cggacgcttc cctcactgtc
     6121 cacgtcgtgc cccggttccg gcgtgctgca cagcagccac gaacgctgcg catcctcggg
     6181 gtcggccatc agtttcggct cgcggccctc ctcgtaggcg gcaccgcctg gaaaatcctg
     6241 cccgaagccc tggcggacga tcgggcgcgc cttctccagc ggcaggccga tcttcgcccc
     6301 acggaacgaa acgaacgtca tcgtcggcag gatcacttcg tccaccggca gccccttcca
     6361 ttggccctgt acgcagaacg tggcgatctc gttctccgcg tcctgccggc agggcgttgg
     6421 cgcattcgcg gccaaccagg ggtgggccgg gcgatcagtc tgttgatcga tgtaccagcc
     6481 ctccagcgca cacgtcggca gggcatcgag cagcggggag aggtcggtgc tggccactgg
     6541 cgcggcaacc ggcgtgtctg ccgcgggtgc ttcgccgggc acctccggtg tgcgctggca
     6601 accggtcagc agcagtgcac cgaccagcag tgcgacgtag cgtggccacc cgcgtgagtg
     6661 atgtgcttcc tgcatggtgc ctttccctgt ttgagaatcc cgtgcagatg atctctgatc
     6721 cggggccagt atgaatgctg gatgcaaggc gatcttgctg gatgacctgg agctaacggg
     6781 agtgcaggcg tcccacccgg taagcgccgt aggcatcgag gattctctgc atccgcgcct
     6841 gctgcttcac gcccatcgac acccgctgca cgcgcttcaa caacgtcttc cacatgtagc
     6901 cggaccggaa gaagtagggc cgcacttcga ggaaggtaag cgctgcatcc agcgtgccgg
     6961 ggtcatgctc ggccagcagt ttcaacgcct ggtcatagcc gcccggaaag gccagctgct
     7021 catagcgcag cgcatactcg gcgcaggccg cagcatggcg cacccgctgc tccggcccat
     7081 gccaacgcgc acctgcggta tcgcggatca cctggcgaag ccggttgatc tcatcggcat
     7141 tggcacggat caggcgttcc atcggcgcgc ggggatgcgc catggctcct tgctccatga
     7201 cggcgtgcgc ggcatcacgg cgcgcggcgc aatgtcacca gggtgatctc cgacggcacg
     7261 ccgatgcgtg ccgggaaccc ggcccacagc ccggccccgt tgctcacgta cagggtcatg
     7321 ccgtccacct cgtagcggcc ggagacatag ccgccgttgg cgcgcttcac cagctggtcc
     7381 ataccgatga tctggccgcc atgggtatgc ccggacagct gcagattgac gccgcgcgcg
     7441 gcggcctcgc gcgcattgcg cggacgatga tcgagcagga tcaccggcgc cgacggatcg
     7501 gcaccggcca gcgccgcgtc cagatccggc agcggcagtc catagcgtgc cgccaccgga
     7561 tcggtgacac cggcgatggt caacgccgcc tcaccacgac gcacctgcag atggctgttc
     7621 tccagcacct gcatgtgcag cgcgcggaac gcctgcatcc agtcctggta ctgcgcgtag
     7681 tactcgtggt tgccggtgat cgcgatgacg ccgtccggcg catgcaggtc ggccagcggg
     7741 cgtgcgtcgt cgcgacgggc ctcgacgctg ccatcgatca ggtcgccggt gatcacgatc
     7801 aggtccggct tcagcgcatt gctctgctcc accaccttgc gcacccagtc gccggtcagc
     7861 aggcggctgg catggatgtc ggtcagctgc agcacgcggt agccgtcgaa cgcagccggc
     7921 agatccttga tcgccacgtc gatctgccgc ggcttgggca ccgccatgcc ctggctgacg
     7981 ccatagccgc tgaccagcag cgccagcaca gcggccacgg gacgcagcct gggggcgcgc
     8041 aatgccgata tcgcgcgcgg ccggcggagc aggcgcgaca gcagcagtcc tgcgtccagc
     8101 accagcatca ccagcgcaag cagcagcacc gccgtcgagc cggtggccag cgtggcgatc
     8161 gccagcttcg gtatctccgg cgaggccatc gtgccccaga aggtggcgac gatgcgcagc
     8221 tgcacggcca cagccaccag cagcagcgac agcacgacct tcaatgcggt gggcaggcgc
     8281 agcggccaga acaggcgcca ggccacgtac aggcccatca acaaaccgat cgtactcagc
     8341 actgcaacca tccaggaaga aaagcgggcc cgccatggtg acgggcccgc gtgtcattgg
     8401 gtagaggcag catcacgccc cgggcaggcg ctccacccgc aggcgggcga tgcggcgctt
     8461 ctccatcgcc agtacggtga tgcgcacgtc ggcgatctcc accgcgtcgc cgatgtccgg
     8521 caggcggccc aaccgctcca gcaccagccc ggagatggtc atgtagtcgg cactgcgcgg
     8581 cagcgagacg cccgccaggc gctgcaggtc atccagggtc agcgcaccgt cggcctccca
     8641 ctggccttcg ccctgcgcga ccacgccata gcgctcgtcc tgggtatcca ccaggtcacc
     8701 ggcaatcgcg gccagcaggt cgttggccgt caccaggcct tccacgctgc cgtactcgtc
     8761 cactgccacc gccagcggca ccgggtgctg gcggatcagt tccagcgcct gcagcgcgct
     8821 ggcactggac agcacgtact gcggctcgcg caggttgcct tccagctgca gcggcctgcc
     8881 ctgcagcagg tcggccagca ggtcgcggct ctgcaccacg ccgcgcaggc tgtccagatc
     8941 gccgtcgccg accagcaggc gggtatgcgg cgaggccacc aggcgcgcca ccacatcgtc
     9001 ctgcccgcgt gccacgtcga tccactgcac gtcggcacgc acagtcatca cgctcgacac
     9061 cggtcgatcg gccagcccca gcacgctgcg gatcatctcg tgctcggccg gctgcagtcg
     9121 ctcttcggca tcggcgtgtg cgtcctcgct ttcgtcgtcg tgtccgttgg ccggacgcgc
     9181 ccccagcatc cgcagcacgg cgtcggcggt gcgctggcgg aacggctggc gccgctcgtt
     9241 gcgctcgcgg ttgaaacgca cccactggtt gaacgcttcg accaggatcg agaaggcaat
     9301 ggccgcgtac aggtagccct tcgggatctt gtagcccagg ccctcggcca ccaggctgaa
     9361 gccgatcatc agcaggaagc ccaggcacag caccaccacc gtgggatgct tgttgacgaa
     9421 acgggtcagc ggcttgctgg ccaccagcat cagcgccatc gcgatggtca ccgcggcata
     9481 catcacgccg aggttgtcga ccatgccgac cgcggtgatc accgagtcca gcgagaacac
     9541 tgcgtcgagc accacgatct gcgccaccac catcgcgaag ctggcataga ccttctttcc
     9601 atcctcgtgg tgctcgcggc cttccagccg ttcgtgcagt tccatcgtgc ccttgaacag
     9661 caggaacagg ccaccgccca gcaggatcag gtcacgcccg gagaagctgt gatcgaacag
     9721 cgtaagcagc ggctcggtca gcttcatgat ccaggccagc gccgccagca gcaccagccg
     9781 catcaacagg gccagggtga ggccgatcac ccgtgcgcgg tcgcgctggt gcggcggcag
     9841 cttgtcagcc aggatcgcga tgaacaccag gttgtcgatg ccgagaacga tctccagcac
     9901 gaccagggtt gcaaggccca tccatatcga ggggtcagcc aaccattcca tttcaggtcc
     9961 gtttcgtcag taggtaaggg agaaaagcag tcattcaatc ggcatcctgc gcctgcgccg
    10021 ggtcatgacc gagcaggtcg ccgggcgtgc actgcagctc gcggcagatc gcatcgaggg
    10081 tggaaaagcg gatggcgcgt gccttgccgg tcttcaggat cgacaggttc gccagggtga
    10141 tgtcgatgcg cccggccagc tcggacaggg tcatgccccg ttcctgcagc atgcggtcga
    10201 gggtgatgac gatcgccatc agcgcgtgcc catcagacca gaccgtccag gtcatcgcgc
    10261 atcgccgcgc ctacggcaaa cacgcgtgcc agcacgaaca gcatcagcac cgcgaccagg
    10321 ccggtgatcg acatgccacc gccgacttcc atccaggtga agtccgggcc catccaggcc
    10381 gcgtaggcac cgatcaggat cgacagcagc tccatcgcca gcatcaacca cgccatgcgc
    10441 tgcaggcgct gtgcattggt gtgggtgaac ggctgctcgc gcgccgccga gtccagcagc
    10501 cgcagcagat gacgcaggaa caccaggcac agcaccagca gcacgacgat ggcgcccagc
    10561 cccaggcaga aatgcaggaa cagatcgttg ccgtgcgcgg ccgcggcagc ggcatcatgc
    10621 acgttgtcga gcagccagcg gcggtcgtgg gcgacgaggg gaacggccag cagtgcggcc
    10681 aggatgccca gccagcacat cgcgcgcacg gcctgcacgg cggcctgggc cagggtgaac
    10741 aagcctcgcg cgggtctggc gcgggcgggt cgagcggtca agcggcctcc ggcattgggg
    10801 tggcatgccg ccccgggatg gatttatcga taaacgatat accacatcct gcgcgaaagg
    10861 ctgaatcgcg ggcgtggcgc gaaccgctac ccgggcgcat agggcgtgca ggtgccggcc
    10921 cgccgccggc accaccccag tgccatcagc tcacagatgc tggctgaaga acggaatcac
    10981 cgccgccagt gcctgccgga ccggctccgg ctggtcatac aggtcgtagt gcgacccacc
    11041 ctccaccacc ttcagctgct tgtgcttcga agccgcacgg ccatggatct ccaggccatc
    11101 gcggtaggca ccaaacgccc ccggcttgtc accaatcacc accagcagcg gctgggtcag
    11161 cagcacttcg gccagatgga aggcatccca gcccaccgct gcaccacgat gcgagaacag
    11221 cgcgctgacc acgccgttgg gctgcggccc gcgcgtgcgg tagtagtccg tggcctccag
    11281 cacgtcgata tcggtgatgc cggcagcgcg cccctgctcc accgacggtg gcaggaacag
    11341 gtccacgcgt gcctcgccgc cacgcatctc ggcggtgcgc tgtgcggcga tggcctccag
    11401 cgaaccaatc ggatcgaagc cgccaaagcc ctcgcggctg agccggccga agttgacgcc
    11461 ggtgatgctg gtgaccgcct tgatgcggcg ctcggtcatg gtggcgttga tcgcatagcc
    11521 accaccacca cagatgccga gcacaccgat gcgtgcggcg tccacgtacg gcagggtgac
    11581 cagatagtcg accacgcggc gtacatcctc cacgcgctgg gtcgggtctt cgatccgtcg
    11641 cggttcaccc ccgctggcgc cctggaagct ggcgtcgtag gcgatcacca cgtaaccctc
    11701 gcgggccagc gcctcaccgt agacgttgcc ggacgtctgc tccttgcagc tgccgatcgg
    11761 gtgcatgctg atgatcgtgg ggtaggcccg gttgcggtcg aagtccggcg gaaagtgcag
    11821 gtcggcagcg atatgccagg ccatgtccgg gttctggatc ttgacggttt ccatgcggtg
    11881 gctcctcgtt tgcggcaggg cgaccggtgt cgccgttgca agcacgatag acctgggatt
    11941 gggagcagaa aagacgccaa tctcaaccac agtagtaagc tgtgattacc agaaagcgac
    12001 gggcgtggcg cccgaccgag cccccatgag tgcccccacc gcgatcaacc cggccctgct
    12061 gccgcagctg gcctggtttg cccacattgc ccaccatcgc agcttcacca aggcggccga
    12121 agagatgggg gtctcgcgcc ccgcgctgtc gcagagcctg aagacgctgg agaagcaact
    12181 gggcgtgcgc cttctgcacc ggaccacccg cgagatgtcg ctgaccgagg aaggccagcg
    12241 cctgttcgac gcagtgcagc catcgctgag caccatcgac agcgcagtac gcgacctgcg
    12301 cgccagccat gacgccccct ccggcctgct gcgcatcaat accgcacgcc tgaccgccaa
    12361 gacgctgatc gaaccacacc tgcctgaatt cttcgcgcgc taccccgagc tgcgcgtgga
    12421 gctggtgatg gacgatggcc tgtccagcat cgtcgccgaa ggctgcgacg ccggcatccg
    12481 gctgggggaa cggctggccg aaggcatgat cgccgtgccg gtgacgccga tgctggaaat
    12541 ggtggtggtc gcctcgccgg cctacctggc ccggcatggc acgcccagca cgcccgccga
    12601 actggccggg catgaatgcc tgggctaccg ccagaccggc agcggcacgg tctatgcctg
    12661 ggagttcagc acgcccggcc agcatggaca cgactttgaa gtggaaccgc gcggacgcta
    12721 tgtcaccaat gatgacgaag ccatgatccg cgccgcgctg cagggactgg gcgtgatgca
    12781 gcacatcgac ctgtcactgc agccgatgct ggcagatggg cgcctgctgc ggttgatgcc
    12841 ggaatggtcc gcgccgttcc ccggcttcta cctgtacgtg ccatcgcgtg agcagatgcc
    12901 accccgcgtg cgcgcgctga tggaattcct ggtcgagaag cgcgagggcg tcgccaaagc
    12961 gctcggccgc cccgtgcagg caccggccac cggcggctag gcgtcagcgc aggtaacgat
    13021 agaccaggtc atcggcatca ctgcgcacgg cctgggcgtc gagcacgccg cccagccgct
    13081 gcgcaacggc ctgcgatgcc aggttgtcgg gcgccatgta gctgaccagc gtcggcagct
    13141 gtgccaccac gaaggcccag tcgcgcagtg cctcggccgc ttcagtggcg aagccctgcc
    13201 cttcgtggcc gtcatacagt agccaaccca gttccttctc cggaaacagc gggccatggt
    13261 tgatacccac ctggccgatg caggcaccgg tgtcggcccg ctcgatcatc aacgcaccat
    13321 ggccgaacag atgccagctc gccaggtcat ggcagaactg gccccacgcg gcaacctcat
    13381 cgaatggacc gcccatgccg cgcgcgcgcg gcgacgcaag gaacgccgca tagatgccga
    13441 agtcatccag ctgttgcgga cgcagccgca ggcgcgcggt gtgcagggtg ggaatatcga
    13501 gcatgctgcc ggtcggctca gtacaccgcg aggtggccgc aaccgcgtcg ctgcggttgc
    13561 ccttccatcg ttacctgcac gctggccagg gtgtcgacac cttcggcatt gcggcacgac
    13621 tcgcgcttga tctcgacaac ggcgggctgc ctgcccagct caccattgag cacgatcagc
    13681 gaactgggcg catcggccgg ctgcccgaga tagcgcaacg tacccttttg ggtacggcca
    13741 tcggcgctga ggctggcatc gtggttgccg ttgccggtgg acgcgatctc gatgctccac
    13801 cctgccccgc caccggtgaa cgcaggcacc gggctcatgc cggccgcgat cgagggaggg
    13861 cgcggctcat cggccgtggt cttcgatgcg gggctggcgc agccggccag caggcccgca
    13921 agcagtgcgg cgaaggcaag gggatgcacg gtcatggtgg gctcctgcag cgatcgggcc
    13981 gccagtgtag ggcgcgccac gtgcgccgac gatgaacatg accggtcaac gtgaggtgcg
    14041 tcccccaccg gcaacccgca cgcggtcgcg gccctgtgcc ttggcctggt acatcgccgc
    14101 atcggccgcg cgcagcaggg tgcgccagcc cagtgcgtcg gtaccgccct cggccacgcc
    14161 gaagctggcg gtcacccgca gcactgtgcc gccccccact ctgatgtcca gctgctgcag
    14221 cgccaaccgc agcgattcgg ccagccggcg accggcatcc agatcgccat cggccagcag
    14281 caccaggaac tcttcgccac cgtagcgggc gatgctgtcg ctgcggcgca ggtggcgctg
    14341 cagcagctgc gcgacctgca ccagcacctc gtcgccggca tcatgcccat ggccgtcatt
    14401 gatcgacttg aagcggtcca cgtccagcag gatcaccacc gccgccgcag cgccctcggc
    14461 atggcgctgc tgcacccgct ggtccagcgc gcggcggttc aacagcccgg tcagttcatc
    14521 ggtacccgca agctgccgca gctcactggt cagcgccgag cgttcgcgcg aggtttcgcg
    14581 caggacttcg atcgcatcga acaggcgctg catttccgcc agcggatggg tgacgtgctg
    14641 ctccggcccc ggcgcgtcgg aggcgatctg gatcacctgc cgctgcgcct gcagcagggg
    14701 ccgcaggatc tgcacatggg caatgcgcag ggccacgccc agcaccacca gcgtacccac
    14761 gaccgtcgcc accagtaccg ccaggcgcat ggcggcgcgg ttgcgggtat gttcgaagcg
    14821 ggcaatggac acactcaggt agccatcgcg cagcgcctcc agcgactgca acgtcggcac
    14881 atagcgccgg gtgaactcgg cggcggtcca cggcggaggt acaccgcgac gaccgccttc
    14941 gatcagctgc tcgaccatcg gcagcgattc accgaaaaac tgccgtcgcg ccatgtccca
    15001 gtgccaggac aacgccgggt cactgcggaa caccgcctcg tggctgccgg ccagccgcca
    15061 cagctccagc aggcggccct cggtctgcag cgccgcgcgc acctgctcgt tgcgccaggc
    15121 acccggcacc gccaccggcg ccatcacgtt ggacgccaaa cgcccgccgt gctcgcgcag
    15181 gtcgatcagc acctggccct gcatcgccgg aatcgcagcc tcgcggtcgg cgcggaccag
    15241 cacgttgatc tgtgcggacg tcagcaggtg caggcggtcg accaccgcga acatgctgct
    15301 gatcgcgcgc tccacgtctt cgacccggcg tgcgtcctgc ggctgcgccg ctacccggtc
    15361 cacgctggca cgtgccgact tcaggcggcg ttgcgcatcg gccagcatcg catgtgcatc
    15421 cacctcgccc ggatgggcct tgaacgcggt gtccagctgc agcatggcgg cgtcgacccg
    15481 ccgccgcacc acggccagct gcatggccag ccgcgcctgc tcggtgctgt cgtccgcgcg
    15541 cgcgcccagc aggctgttgg ccgggccacg ttcggaggag accaggttgg ccagatcaaa
    15601 cgtctgccgc agctggcgca ggctgaccag attgtcctcg gcggcggcat agcgcatcgt
    15661 gccctggacc agggcgatga ccatcagcgg cagggtgcag accacgaaca gtcccgccag
    15721 gatccagacc caggtccgca acccgatggg cgataccttg ccggccattc aactttcccc
    15781 tgacgtgcgg atcactgtac tgagcggccc cggcagtgcc aagccagcgc tatgcagccc
    15841 ctgcccctgc gtatacccca gtcatcgcga acgtgccgcc aagaggcggc acccggctcg
    15901 ccgaaacaaa tccgtcacgt cagcggggtc agatccagcg ttgatccacc agttcccgct
    15961 tcacataggc gtagaacacc ggcgcggcca ccagccccgg caggccgaac gccgcctcca
    16021 tcaccagcat ggccagcagc agttcccagg cgcgcgcctg gatctcgccg ccgacgatgc
    16081 gcgcgttgag gaaatattcc agcttgtgga tgacgatcag gtacagcagc gccgccaccg
    16141 ccacgtagaa cgacaccgac aacgcgacga tggtgatgat ggtgttggag atgatgttgc
    16201 ccaccaccgg cagcaggccg gcgatgaagg tgatcagcac cagcgtcttc gacaacggca
    16261 ggtgcacgcc gaacaagggc agcacaccca gcaggaaaat cgcggtgaac acggtgttga
    16321 gcagcgagat cttcatctgc gcgaacacca cctggcggaa cgcagtagcc aggcggctgg
    16381 tgcggccgat cagttcctgc gccagcggcc ccatcttcgg tagcggcagt tcgtcataca
    16441 gcgcgatcat cgcgcccagc accatgccga tcagcacgcg cacgcccacc tgtaccaccg
    16501 aggtaccggc cacgcccagc tggcgctggt gctcggcggc ccagtcgttc agcgctgcgc
    16561 gcagcgccgg catgtcttcg ggaatgtagg gctgcaacag cgccggcacc tggtgccgcg
    16621 acgaattgag gatctccatc agccgtgcca gcagcgcgtc cggcccgccg gtctcgttgc
    16681 ggaagaacga ggccacgccg atcccggcca gtaccagcgc gctgatgatg accgccgaca
    16741 gcacgatcac cgcgatcgcc cgtgcccgcc ccggtggcaa ccggccttcc acggtggagg
    16801 ccagcaggtg ggtcagctgg aacaccagca ggcccgacag cagcgtcacc accagcccca
    16861 gcttcagcgc cagccacatg cccagcagca tcatcagcca ggccgcgatc ctcggaacgg
    16921 ggggcttggg ctgcacaacg agggcgtctt gcatgggggc acgtccgggc ggggtggccc
    16981 atggtagagg attggccgtg cgattccgtg tgcaggatga acggccgtta cgccgtcatt
    17041 gggcggcgcc gtgttcgcca tagctggcgt tgttcttgcc ctgccgcttg gcgtggtaca
    17101 gcgcccggtc ggcctgcgcc agccagtcct ccacgctacc gccgcgcggc gtggcggcaa
    17161 tgccgatgct gacgctgaac tccacgcccg gggtggcctg gcgggcggcc tcgagcaggt
    17221 gcaggcgcac ccgctcggcc acatgcatcg catccaccgg cgcgcagtcg tacagcagca
    17281 cgacgaactc atcgccaccg aggcgggccg gggtatcacc cggccgggca aacgcgcgca
    17341 gggtcgaggc gatgtgccgc aggacctcat caccggcgcg gtggccatgc gagtcattga
    17401 tgcgcttgaa atcatccacg tccagcatca gcaggcaggc aaagccgccc tgccgctgcg
    17461 ccttgtccag cgcctgttgc gcgcgcagga tcaggaagcc gcggttggcc agctcgacca
    17521 acgggtccat ccggctcaag cgctgcagct gccggttctg cgatttcacc cgacgcgcca
    17581 gctgccagct gaggatgctc agaccgatgc cgtagacgaa caggaacggc acgctgagca
    17641 cgatcgtgcg ttgcgaggtc accggctgat agggaaaccc gagggcccac caggtgatcg
    17701 caaaacccag caccagtgcc agcgtggcgc gcatcgccag gcgcacgccg ccggcagcga
    17761 tcttgtcggc gaccagcagc gccgcgaaca gtgcactggg caccgcgctc aaccccatga
    17821 aggcgatcca gccaccgccg aacaacgaat cggccaccat gcagcggaac tggattacgg
    17881 caggctgccg ggagcggtgg gtcagcagca gcgcgagcgc gggccaggcc agtgcattga
    17941 gcagcagcag aacccaggcc agcgcaccgt catggcgttc caggatgatc gaggcgatcg
    18001 ggatcgcgcc caggccattg cccacgaagc gcatccagcc gatgcgccgc gccgcgccga
    18061 tgccctcgac cgcgacctcg gtcgagtcag tcaagaacgg cattgccgac ccccttgcgc
    18121 gatcgcacgt tccatctcag aactccacct cagcactcca gcccggcact ccacctcgac
    18181 gcgtgccggg ctgcctggcg tgagtctgac agcttcgcgt caattcggga tcaagggatc
    18241 aaggtcgcga cctggcctgg gcgccgccgt cgagccccgc agcatcaggc tgaaatccag
    18301 cgtctgctgg agctgcacat cggcatgctc gatgatcgcc aacagcagct tgaccgcgcg
    18361 ctcgccgatc tcgcgcatcg gctgccggat ggtcgtcaac ggcggcgtga ggtaacggga
    18421 ggacgccagg tcgtcgaacc ccacgatgga caggtcatcc ggcacgcgga taccccgctc
    18481 acggcaggcc gccagggcgc ccagcgccat ctggtcgctg aagcagaaga tcgcggtcgg
    18541 tgccggtgcc acgtccagca acgccattgc cgccgcgtgg ccggattcca cggaaaagtc
    18601 gcctggcacg atgcgctgct ggcgcagccg tccgcgcgcc ttgcccgcgg cccggacacc
    18661 ctgcagccgc tgctggtgca gagggttgtc gggcggcccg ccgaccacgg cgatctgctc
    18721 gtgacccaat ccgtagaggt gttccatcac cgcgcgtgca gccgccgcgt tgtcgatgtg
    18781 gacgctggga atgcccagcg caggatcgaa ctcgcatcca ttgaccaccg gcgcggcggc
    18841 gccacgctgc tgcacgatct cgcgcgccgt cggcggcaat cgatgcccca gcacgatcat
    18901 gccgtcggcc tcgttgcgcc ggagcatctg cgcatagcgc tcctcgcggt cgggttgatg
    18961 ctgggtatcg cccagcagca ccgcgtagcc aaccgcctgt gccgcctcct ctgcgccttg
    19021 caggatctgg gcgaaaaatg gattggcgat atccggcacg gtgaccagga tcttgccgct
    19081 gcgctgggtc ttgagtgtcc tggccaccgt gttgggcacg tagccgagcg cggcagccgc
    19141 ctgctcgatg cgcgcgcgcg tggcgggcag caccttgtcc ggccgggaaa gtgcccgcga
    19201 caccgtaccg gcagagacgc ccacgtgctt ggcgatgtcg tagatggttg ccatggtttc
    19261 agctcttgtt tccgctgtgc actgcacaac gggtctgcgg gaggcccatg ctagggtaat
    19321 gcaatcgatt gcatcgaggg cgaatcatct tgaagacgct caagggtcca gcgctgttcc
    19381 tggcgcagtt catcggcgac aaagctcctt ttgatcggct ggacacgttg gccggatggg
    19441 ccgcggggct gggctattct ggcgtacaag tacccaccac ggcgccccac ctgttcgatc
    19501 tggccaaagc agcacacagc caggcctact gcgatgatgt tgccggcatg ctggccggac
    19561 acggtgtgca gatcaccgaa ctgtcgaccc atctgcaggg acagctggtc gccgtccacc
    19621 ccgcctatga cagcctcttt gacggcttcg caccgcctgc ggtgcacggc aaccccgccg
    19681 cccgccaggc ctgggcggtc gatcagctga tgctggcggc caaggccagc cagcatctgg
    19741 gactgaccgc gcacgccacc ttctccggtg cgctggcctg gccgtacttc tatccctggc
    19801 cgcagcgccc gcccggcctg gtggacgaag ccttcgccga actcggccgc cgctggcgcc
    19861 cgatcctgga tgcgttcgac gcctgcggcg tggacctgtg cttcgagatc caccccggcg
    19921 aagacctgca cgacggcgcc accttcgagc gcttcctcga cgtggtggat catcacccgc
    19981 gggcgaagat cctgtacgac cccagccacc tgctgctgca gcagatggac tacctgggct
    20041 tcatcgaccg ctaccatccg cgcatcggca tcttccacgt caaggacgcc gagtaccgtg
    20101 cgagcgcccg cagcggcgtg tatggcggct accaggactg gatcgatcgt ccgggccggt
    20161 tccgctcgct cggcgatggc cagatcgact tcaaggcgat cttttcgaag atggcgcagt
    20221 acgactttcc gggctgggcg gtgctggagt gggagtgctg cctgaaacac cccgaggacg
    20281 gcgcgcgcga aggcgctgcc ttcatccgcg accacatcat ccgcgtgacc gaacgcgcct
    20341 tcgatgattt cgccgacagc ggcaccgacg ccgcttcact gcatcgcatg ctgggaatct
    20401 gagtcattac cgccccggga gggcaagcca tgacgcacgc catgtcgcgc ttgggcgcga
    20461 tgatgtttct gcagttcttc atctggggag cgtggttcgt caccctgggc acgtacctgg
    20521 tgcagggccc gttgcaggcc agcgcgagcc aggtcgcgac cgccttcctc agccagtcga
    20581 tcggggccat cgtcgcgccc ttcctggtcg ggctgatcgc cgatcgctac ttcgcggcgc
    20641 agcgcatcct cgcggtcctg cacctggccg gagcggtgct gctgtggctg gcgtccaccg
    20701 cgacagactt caccacattc tccgcctgcg tcatgggcta catgctgctg ttcatgccga
    20761 cgctggcact ggccaacagc gtggcgatgc ggcacatgca atcgcctgaa aagcagttcc
    20821 cgctggtgcg cgtagccggc agtatcggct ggatcatcgc cggcgtgctg atcggctgga
    20881 tgggctggga gcaggcacac cggctcgagc tgaccttcca gatggccgcg ctggcatcgc
    20941 tgctgctcgg cctgtatgcc ttcactctgc cgcacacgcc gccgctggcc cggcagcgcg
    21001 acgccgggct gggtcagatc ctcgggctgg attcactgcg gttgctgaag tcgcgctcct
    21061 atctggtgtt cttcctggcc tccatcgcca tctgcatccc gctgtcgttc tactacaact
    21121 tcaccaaccc ctatctcaac gatctgggcg tgcgcggcgc cgcgggcctg cagtcgctgg
    21181 gccaggtttc ggaagtgctg ctgatgctgg ccatgccgtt cctgttcgtg cggctggggg
    21241 tcaagacgat gctggcagtg ggcatggcag cgtgggtcgt gcgctacggc atgttcgcct
    21301 ttggcgatgc cggcagtggc ttctcgctgc tggtgatcgg catcgtgctg catggcatct
    21361 gctacgactt cttcttcgtc accggccaga tctacaccga tgcccatgcc ggccccgacg
    21421 cacgcagcag tgcgcagggc ttcatcaccc tggccaccta tggcgtgggc atgctgatcg
    21481 gcaccttcct gtccggcgcg gtggtggagc actacaccac cgccgcaggg cccgactggc
    21541 agcagatctg gctgttcccg gccggcgtcg cactcatcgt gctgatcgcc ttcctgctgc
    21601 tgttccgcga ccggccggtg gttgcggccg cagcgtccac gcactgagga ctgcagccga
    21661 tgcccaagcc tggaatcgcc atcatcggta ccggcatgat cgcggccgtg catcgtcgcg
    21721 ccgccttgct ggccggtgcc gacatccgtg gcgtggccgc ctcttccgcg cagcgcgccg
    21781 ccgaggtagc gcaggcgtgg ggtgtcccgc gcggctatcg cgatatcgag gaggtggtgg
    21841 ccgacccgca ggtgcaggtc gtgcacgtct gcacgcccaa ccacctgcat cgggccatgg
    21901 ccgaagctgc actgcgggcc ggcaagcacg tggtctgcga gaagccgctg gcgaccacgc
    21961 tggacgacgc gcaggcgctg gccgcactgg ccaactcgag cgggctggtc gccacggttc
    22021 ccttcgtcta ccgctaccac ccggtggtgc gggaagcccg cgcgcgcatc gccgcaggcg
    22081 acatcggccc cctgcacctc atccatggca gttacctgca ggactggctg ctggacccgg
    22141 ccagcaacaa ctggcgcgtc gatccggcgc tgggcggcgc ttcgcgtgtg ttcgccgaca
    22201 tcggttcgca ctggtgtgac ctggtggaat gggtcagcgg tgaacgcttc gccgaggtca
    22261 gcgcggcgtt cgacacggtg atcgccgagc gcagcgcctc cggcgcgcag agtttcagca
    22321 ccccggcagc cggcggtgcg atgcaggcgg tcgccagcga ggacgtggcg gcgtcgatgt
    22381 tccgcaccgg caacggcacg ctggcatcac tgaccgtcag ccaggtctct gccggacgcc
    22441 gcaatcgtct ctggttcgag atcgatggcg cccgggccag cgtggcgttc aaccaggaag
    22501 atgccgagcg gctgtggatc gggtggcccg accagcgcga agaaaccttc gtgcgtgggc
    22561 cgggagccgg cagtgccgaa cagcgccggt tgtcggtgtt gccggccggg cacgcacagg
    22621 gttacgccca gtgcttcgag gcctttgtcg ccgacaccta tcgcgccatc gacggcgagc
    22681 ggcccgaggg gctgcctacc ttcgacgatg gcctgcgctc ggcgctgatc gtcgaccgtg
    22741 tcatcacatc ggccaggaca cgcgcctgga ccaccatcgc ttgaaacccg ggaggatctc
    22801 ttgatgaaag cccctgtccg tagaaccgca ggcctcgtcc tgctgctgct cgctgccctg
    22861 cccgccttcg cgggcgaagt ggcaggcacg cagaagccga tcgcggtgca gatgtacacc
    22921 ctgcgcaacg ccggctcgct cgagcagcag ttgaagatcg tccacgacgc gggcgtgcat
    22981 gcggtggaaa cggtcggcac gcagaacacc agcgcggcgg acctcaagca gctgctggac
    23041 cgctattcga tcagggccat ttcgtcgcac gtgccattgg ccgagctgcg caacaacctg
    23101 gacggcgtag tgaccttcaa ccgcgcgatc ggcaacagca cgttggtggt gccctacctg
    23161 gaccagaagg accggccggc cgatgccgca ggctggaccg cactgggcca ggaactgggc
    23221 cgcatcgcca aacaggtgcg ggccaagggc atgtacctgg cctaccacaa ccacgacttc
    23281 gagctggtcg acttcaacgg caggacgggg ctggaactgc tgttcgccgc cgccggtccc
    23341 gacctgcaga ccgagctgga cctggcctgg gtcgcgcgtg ccggcctgga ccctgcggtg
    23401 atgctgggca ggttccgcgg gcatgtcttc gcggttcacg ccaaggacaa tgcccccaag
    23461 ggccaggccg aagacgaggg cggattcgcc gcggtcggcc agggcgtgct ggactggaac
    23521 gcgatcctgc cggccgcagc ggccgctggc gtgcactggt acatcgtcga acatgaccaa
    23581 ccgcgcgatc cggccaaggt catccagacc ggcgcggact acctgtgtga acatctgacc
    23641 gtcaatgcgc ccgcccgtgc gcagccctga cgcatgaagg agccccacat gaaaatgatc
    23701 ctggcaatgg ccgtggccct gggcgggctg ggctccgcaa cgtccgcctg gtgcaaggac
    23761 gacccggctg cgggtgcaaa gctctacacc gcgaactgcg tggcctgcca cggcgccgat
    23821 cgtgcgggca tgccgggcgc cttcccggcg ctcaccgaca tcggcaagcg catggcaccg
    23881 gcgcagatca aggaaaagat cagcaagggc ggtgggctga tgccgccctt ctcccagctc
    23941 tcgcagcagg aaatcaacga catcgccagc tacctggcga agtaagcggc cggcgaccac
    24001 gccggccgta tgccactaca gttcgcgcac ccagatgttg cggtagctga ccctggaatc
    24061 atgttcctgc agatagagcg gtgcgcacgc gtgtggcgca taggaaggtg caccgatgta
    24121 ttcggtcctg cccgccagca cggtgtcgtc ctgcaccagc acgccgttgt gcagcaccgt
    24181 gatgcgcgcg ggcgacacca gccctccgcc cgccgagaag cgcggtgcct tccagaggat
    24241 gtcgtaggcc tgccactggc ccggcgcgcg cgaggcattc accagcggca tggcctgctt
    24301 gtagatcgag cccgcctggc cgttggcata agtcggattg ttgtagctgt ccagcacctg
    24361 cagctcatac agctcctgca ggaagatgcc gctgttgccg cggttctgtc catcgaagcc
    24421 cttcgtgtcg atgggggtgc gccactcgac atgcagctgc acgtcgcaga agcgttgctt
    24481 tgtgcgaatg cccttgctgc cgggcacgac agtcatggcg ccatcggcaa ctttccaggg
    24541 cacttgccca ccctgctccg attcccaagc cgagacatcc ttgccatcga acaatacgat
    24601 ggcgtcggac ggcgccttgc ctggcggcgt ggccacggtt gcaggcaccg gcgtccacac
    24661 ctcggtcttc ttcggatcgc gcgcagggtc ggcgccctcc tgtgcgaaca cggaaccggc
    24721 ggccagtaca ccggccgcga tcagcagcgg cttgatcatc atgcagcgct ccatcagctg
    24781 gtcccccatg caggcgtgcc ggcaacatag gccaggtcgc catcgtagcg acccggtacc
    24841 gcaacgtagt gcagcacttc ggtcgcgccg actttcgaag tgaagaagcc gaagatggcc
    24901 agctgcttga gcatcgtgaa gtaatgcggc atcgcctcgc cctcttccgg agtgcccgtc
    24961 tcggtcacct cggccgtgcg tgcctttgct tctgcatcca gcgtgcgcag cagcgtgtta
    25021 cgggcgtctg gcgtgagcga tgcgaagcgg ccaccggagc gcgcgtcgat gtcggagagg
    25081 ccggcgcgga acgtcgcctg ctgccgggcg gtgtagcagt cggcaacgaa ggtcgccatg
    25141 aacggacccg caccggcatc cttcgctccc ggtgttttcg tccgtggcag gatggtctcg
    25201 gcgatctcgt ccagcaaggc gatatcggcg tcggagaagg caggcatcgc gccggcagcc
    25261 ggtgccttgc cctctaccag cgccggcaga ccgaccatgg ccgcacccgt ggcagcaacg
    25321 atcatcttca acagttcgcg acgatccatc agaggttccc cgctttcagt tcacgcacgg
    25381 catggtcggc ggcgcgggcg gtcagcgcca tgtaggtcag cgacggattc acgcacgcgc
    25441 tggaggtcat gcaggcaccg tcggtgacat agacgttggg tgcatcccac acctggttgt
    25501 gctggttcaa taccgagctc ttccgatcac ggcccatgcg cgcggttccc atttcatgga
    25561 tgcccttgcc cggcgcgtag tcgttgtcgt gcatcttcac gtccttgacc ccggccgcct
    25621 ccagcatctc ggcggcatcg gcggccatgt ccttgcgcat cgccagttca ttggcgcgca
    25681 tggcaacgtc catcgccagc accggcagtc cccacttgtc cttgcgctcg cggtccaggc
    25741 ggatcgtatt gtcgtggtgc ggcagcattt caccgaaccc ggtcatgccg atgcgccagt
    25801 cgccgggcac ggtcagcgca tccttcaggt cggcaccaat gttcagctcg gcgatctcgc
    25861 gcgaccagcc tgtgcggctg gcaccgccct ggtagccgaa cccgcgcagg taaccgcgct
    25921 tgtcggcggc aacgttgcgg aaccgcggaa tatagaaacc gcagggtcga cggccgaagt
    25981 agtacttgtc ttcgtagccc tcgacgcggc cggaagcacc cgctccgaaa tgatggtcca
    26041 tcacgttatg ccccagctcg ccggacgagg aacccaggcc gccctcccag acatcggtgg
    26101 ccgagttcat cagcagccag gtcgagttga aggaggaggc gttgaggaag atcaccttgg
    26161 cggtgtactg gtaggtctgg ccggtctcgg catcgatgac ctccacgccg cgcgcacgct
    26221 tgcgatcctt gtcatagagc acttccttga cgatcgagaa cggccgcagc gtcaggttgc
    26281 cggtcttcat cgccgccggc agcgtcgccg cctgggtcga gaaataggca ccgaaaggac
    26341 aacccaggat acacttgttg cggtactggc agttgacgcg accctgctcg ggcatcggct
    26401 gggtgatgtt ggcggtgcgc gagtggatca tgtggcgggt gccgccgaag gctttcttga
    26461 tccgtgcggc cacgtccttc tcgacgatgt tcaacgggat cggcggcagg aattcgccgt
    26521 ccggcaacac gtccaggcct tcgcgcgtgc cggcgatgcc ggcgaatttc tccacatggt
    26581 cgtaccacgg cgcgatgtcg gcgtagcgga tcggccagtc ggtggcgatg ccgtccttca
    26641 ggttcgcctc gaaatccaga tcggagaagc gatagctctg ccgcccccac aacaatgagc
    26701 ggccaccgac gtgatagccg cggaaccagt cgaagcgctg ggtctcgatg tagggcgagt
    26761 cctgttcgtt ggcccacatc ccttccaggt tttcggccag gccatagtcg cgcatcagca
    26821 ccggaaagtc ggccttcatc gcctgggtgg gccggttgcg atgcgggaag tcccacgctt
    26881 ccttcatcgc gttgacgtag tccttgacgt gctcgatgtt gcggccacgt tccagcatca
    26941 ggaccttcag acccttttcg gtcagttcct ttgccgccca accgccactg attcccgagc
    27001 caacaacgat ggcgtcgtag tgattatctg ccatgggttt ctcacctggg tggatatcgt
    27061 ttcagacgtc gcagaggcgg atcgcctcgc gcagagagtt gatggggtct ggcgccgcag
    27121 gcatgaattc ctgcgccaga tagccctcga aaccggtatc gcggatcgcg cgacagatgg
    27181 ccggatagtg gagttcctgc tggtctccga tctcgtgccg gccgggcacg cccgcggtgt
    27241 ggtaatgctt gaaacaggcg tgatgcctgc cgatggtggc gatgatgtcg ccctccatga
    27301 tctgcatgtg atagatgtcg tagagcaggc cgaagttgtc cgacccgagc cgctggcaca
    27361 gctccacacc ccaggcggag tggtcgcaca ggtagtcgtg atgatcgacc ctggaattca
    27421 gcagctccat taccagcacc acgccgcgct tctcggcatg gccgaggatg cgcttgagcc
    27481 cggcctcggc attggccatg ccgtcctgcg ggtccatgcc attgcggttg ccggagaagc
    27541 agatgagatt gcgatagccg gcatcggcga ccagatcgat gtgccgcgtg tagcgctcca
    27601 ccagttgatc gtggaactgg cggccggcga agccctgggt caggcccagc tctgcgccgt
    27661 tgcacatcga gctgtacaag tcatgggcct tcagcgtcgg ccagtcttcc gggccgacca
    27721 ggtcgatcgc ggcgaagccg atgtctttta ccgtcgtgca gagctgggca accgacagct
    27781 gcgggaaggt ccagcgggca acggaatgtt tcaaattgcc cttgagcgct gcggtggcgg
    27841 cgaatgcagg gagcacgcct gccgccccca ggccgattcc accggcaacc gcaaagcgca
    27901 acgcatcgcg ccgcgtgagg cccgtcgccg gggccggtct gatcgaatgg atggacatcc
    27961 accttccggc ctcccaaccg gtatcaaacg caacgattca cagcaatgca atcgattgca
    28021 ccatagggga gggaattgcc ggtttgcaag ttgcgctgca agaaattcaa tgctgcggga
    28081 gcacgacccc aagtacaggt gaaaaaagaa aagccccgca tggcggggct ttcttttctg
    28141 caacaggcga ccgcccgatc agaacggaat atcgtcgtca gcgaagtcgt ccatcggcgg
    28201 cgcctgctgc ggctgcgggc gctggttgcc accttggttg ccgtagccgc cgccctggtt
    28261 gccgccctgg ttgccatagc caccaccctg gccgccacgc tggccaccgc caccgccgcc
    28321 gccgccgtac tcctggcgcg gcgcctgctg gcgctgcgga cgatcgccgc cgtagttgcc
    28381 accaccgcca ccaccgccgc cgccttcacc gcggccgccc agcatctgca tttcatcggc
    28441 gatgatatcg gtggagtact tctccacgcc gtcctggccg gtgtacttgt cgtagcgcag
    28501 gctgccttcg acgtagaccg agctgccctt gcgcaggtac tcgccggcga tctcgccgag
    28561 cttgccgaag aacaccacgc ggtgccactc ggtgcgctcc tgctggttgc catccttgtc
    28621 cttgcggacg ctggtggtgg ccaggctgat gcgggtgatc gccatgccgc cctgggtgta
    28681 cttcacgtcc gggtcgttgc cgagattgcc gaccaggatg actttgttga tgccgcgcgc
    28741 cataggtacc ttcgtccgtt gtccaggggc agaccgccag tgatagcaca gccccggccg
    28801 ggggtgcagt acgctgggcc gcccctgttg aaatttgggg gaatgcgaga acgaggcatc
    28861 ttagcattgc cgccgccatc cgcccggccg gaagaccccg gcggcacctg agattcgggc
    28921 tgatttcctt gtccggcaat gacttaccgc catcccgtcg acccaccgca ggggcattcg
    28981 cgtctgccca tggcatcatg cccaggcacc ttccacctgg ccccttccgc gccccatgat
    29041 catcaaaggc aaagccacct ccctggacat cgcccacctg gccggggtct cccagcccac
    29101 cgtgtcgcgg gccctgcgtg gcagcccgat ggtcaacgcc gagacccgcg agcgcatcct
    29161 gcgcatcgcc cgcgagctga actacaaggt cgacaagaac gcctccagcc tgcgcctgcg
    29221 caatgccggc accctggccc tgctgttctt cgaggacccg accaacgacg attcgctgat
    29281 caacccgttc ttccattcga tgctgggctc gatcacccgc gcctgcgccc tgcacgggca
    29341 ggacctgctg gtctcgttcc agcagctctc caccgattgg caggccgatt acgaagacag
    29401 caacaaggcc gacggcatca tcctgctggg ctacggcgac taccacgaat cgcgcgaccg
    29461 cctgcagcgg ctggtcgaac agggtacgca cttcgtgcgc tggggcgccg ccctgcccgg
    29521 ccagcccggc gtgtcgatcg gcagcgacaa cttccagggc gggcacgaca tcaccaccca
    29581 cctgctgcag cagggctgcc gccggatcgc cttcctcggc catgcctcca gccattaccc
    29641 cgaattccag gagcgctacc gcggccatgt ggcggcgctg caggagcgcg gcctgagcgc
    29701 cgagccagcg ctgcagcacg atgccatcac caccgaggct tccggccagc aggcctgcca
    29761 ggcgctgctg gcgcgcggcg aaccgatcga cgcgatctgc gcggccagcg acctgatcgc
    29821 catcggtgcg atgcgggccc tgcgcgaggc cgggctgcgg gtgccgcagg acgtggcggt
    29881 caccggcttc gacgacattc cgctggcggc ttcggtgtcg ccggcgctga ccaccgtgca
    29941 gcaggacacc aagcaggccg gccagctgct ggtggagcgc ctgctggcac tgatcggccg
    30001 gcagccggtg gacagccaga gcatcccggt gaagctggtg gtgcgcgatt cgtcacagcg
    30061 cgggtaggca gcaaagggcc actggccctg ccaacgcgcg acagccggat tcccccccca
    30121 tgaccaacgg cggatgcgca tggacgcgga tgcgcggata acgcgcagac atcgcccagg
    30181 gaaaggtgta cgtcgcatgc tgaagatcga ttcgctgtcc aagacgtacg ccaacggcgt
    30241 gcacgcactc aacaacgtca gcctggacat cccgcgcggc atgttcggcc tgctcgggcc
    30301 gaatggcgcg ggcaagtcct cgctgatgcg cacactgtcc accctgcagg aggccgacag
    30361 tggtacggcc acgctcagca tccccggcga agcgccgatc gacgtgctgc gcgacaagga
    30421 cgccgtgcgc cgccggctgg gctacctgcc acaggatttt ggcgtgtatc caaaggtcag
    30481 cgcgctggac ctgctggagc atttcgccgt actcaagggc ctgacccagc gtgcgcagcg
    30541 ccacgaagtg gtcgatgggc tgctgcagca ggtgaacctg tgggatgcgc gcaagcgcaa
    30601 gctcggcacg ttctccggcg gcatgcgcca gcgcttcggc attgcccagg cgctgctggg
    30661 cgacccgcgg ctggtgatcg tcgatgaacc caccgccggc ctcgacccgg aggagcgcaa
    30721 ccgattcctc aacctgctgg cggcgatcgg cgagaacgtg gcggtgatcc tgtccaccca
    30781 catcgtcgag gacgtgactg acctgtgccc gacgatggcg atcatgaaca agggccaggt
    30841 gctgttgacc gggcgcccgg ccgaagcgat cgacgcgctg cagcaccagg tctggcgcaa
    30901 gcaggtcgat ccttcggaac tggccgacca tgaggcgcgc tacgtggtgc tgtccacgcg
    30961 actggtgggt ggccgcccgg tgatccacgt gcacagcgcc aacgaccccg gcgacggctt
    31021 cgcggcggtg gcgcccgacc tcgaggacgt gtacttccag cgcctgcgcc tgcaggcccg
    31081 tgcccgcgcg gcggcctgag cggagcgcac catgatcctc aacttcttcc ggttcgagct
    31141 gcgcgagcag ctgcgttctc cgctgctgtg gctgctggcc gggctgttcg ccctgctcgc
    31201 cttcgccgcc gcctccagcg atgccgtaca gatagggggt ggcaccggca acgtgcacag
    31261 caatgcgccg acggtgatcg cgcagatgct gggcatcttc accctgctcg gcatgctggt
    31321 caccgccctg ttcgtcagca acgcgctgct gcgtgacttc gaactcggca ccgccgaact
    31381 gatcttcgcc agcccggtga agcgtcgcga ctacctggcc ggccgcatcg cggcagccct
    31441 ggctgcgggg ttgctggtct acgtcgtgat cgcgttcggc ctgtggctgg caccgttcat
    31501 gccctgggtc gatcccgagc gcatggggcc gatcagctgg cggggctatg cctggacctt
    31561 cgcagtcatc gtcattccca acctgctgtt caccaccgca ctgctgtcac tgctggcggc
    31621 gctgacccgc tcgatcctgt gggtgtacat cggtctggtc gcctacctgg tgctgtacgg
    31681 cgccagcgcc gccctgctgc gagacatcga caatacctgg atcgcggtgc tgagcgagcc
    31741 gttgggcatg cgcgcgctgg gccgcaccat ccgctactgg tccaccgctg aacgcaacag
    31801 cggcattccg gaactggctg gctacctgct ggccaaccgc gcgctgtggc tgggtgtggc
    31861 cgcgctgctg tttgccgcca cctttgccct gttccgcacc gagcgcagcg gcagcggccg
    31921 ccgtcgatgg ggccgcaagc ccatcctgcc cgctgcggat gccgttgcgg tccgtcccgc
    31981 ccgcgcggac ctgccacgcg tggttccggc gttcaccgcg accacggcct ggcagcagtt
    32041 cctgcgccag gtgcgtttcg acacgggcgg cgtgctgcgc agcgtgccgt tcatcgtgct
    32101 gctggtgatg ggcctggcca acttcctgcc cagcgcgctg ttccggcaga ccctgtacgg
    32161 cacctcgatc tggccggtca cctcgcagat gatcatgggc ctgcagggtg ccttcagctg
    32221 gctgctggtg atcatcgtgc tgttcttcgc cggcgaactg gtctggaagg aacgcagtgc
    32281 gcgcatcaac gaagtgaccg atgccatgcc ggtgccgaac tgggtgccgc tgctggcgaa
    32341 gttcactgcg ctgctggcgg tgatcatctg cttccaggca gccggcgcac tggccgcgat
    32401 gggcgtgcag ctggccaagg gctacaccca tctggagcca ttgctgtacc tgcgcagcct
    32461 ggcgctggat tcggtggtct acatcctgat gggaggcctg gcgctggtgc tccaggtact
    32521 gaccaacaac aagttcgtcg gctacgcgct gctgatcgtg gtgatgatcg gccagggcgt
    32581 gctgggcatg ctcgactaca cgcagaacat ctacaacttc ggcagctggc cgatcgcccc
    32641 ttattcggac atgaatggct acggccactt cctgaccggc cagctggcgt tccagggcta
    32701 ctgggcactg ttcctgctga ccctgatgtg cctggcctct gcgttctggg tgcgcggcgt
    32761 cagccagggc ctgcgccagc gcctggccct ggctggtcgt cgcctgcgcg ggcccaccgg
    32821 cgcccttgcc gggctggcgg cgctggcctt catcggcgtg ggcggctggc tgtactggag
    32881 caccaacatc cgcaacgaat tcatatcgcc cgaccagcag ctggatctgc aggcgcgcta
    32941 tgagcgtgaa ctgtcgaagt accggaacct gccgcagccg cgcatcgtgg cggtggacaa
    33001 ccgcgtggac ctgttcccgg aatcgcagtc gatggtgatc gatgcgaact ggacggtgcg
    33061 caacacgcat gccgtgccga tccaggacgt gcatgtctcg atgggtgacg acaggcagct
    33121 ggtcgcggtt gacctgggtg ggcagacctt gtcgatgcac gacgccgatc tcggctaccg
    33181 catctaccgt ctggccacgc cactgcaacc gggtgaggcc cgcggcgttc acttccgggt
    33241 ggtgcagaag cccaacggca tcactgccgg ccaggcgccg agcaacatcg tcgacaacgg
    33301 cactttcttc aacagccgcg tactgccctc gttcggttac aacgaagggg ccgagatcag
    33361 cgatcgcaac gagcgccgca agcgagacct cggtgaaccg cggcgcatgc ccaggctgga
    33421 agaccaagcc gcacgtgcca acacctacat ctccaatgat gccgactggc tcgacttccg
    33481 caccacggtc tgcaccgcgc cagaccagat cgcgctggcg ccgggctacc tgaagcatga
    33541 gaccacggtg aacggccggc gctgcttcag ctatgccatg gaccggccga tgctgaactt
    33601 ctatgcctac ctgtcggcac gctgggaggt gcgcaaggcg acatacaagg acatcccggt
    33661 ggaggtctac ttcgacccgg cgcacggcta caacgtggac cggatgatcg aagcggtgca
    33721 gaaatcgctg gcctactacg agtccaactt cacgccctac cagcaccgcc aggtacgcat
    33781 catcgagttc ccgggctatg cccgcttcgc gcagtcgttc gccaacacca tcccctactc
    33841 cgaggccatc ggcttcatcg ccgacctgcg tgatccggac aaggtggact acgtgttcta
    33901 cgtcaccgcg cacgagatcg cccaccagtg gtgggcgcac caggtgatcg gtgccaacgt
    33961 gcagggcgca acggtccttt ccgaatcgct gtcgcagtac tcggcgctga tggtgatgga
    34021 gcaggagtac ggccgccagc acatgcgcca gttcctcaag cgcgaactgg atggctacct
    34081 gtccgggcgt ggtggcgagg ccatcgaaga gcagccgctg gagcgcgtgg agaaccagca
    34141 gtacatccac taccagaagg gttcgctggt gttctaccgg ctgcgcgagg aaatcggcga
    34201 gcaggccctg aaccgcgcgt tgaagcgttt cctgcaggac aaggggttcc agcagccgcc
    34261 ctacaccacc tcgcgcgaac tgctgggcta catccgtgcc gagaccccgg ccgaccgcca
    34321 gcagctggtc accgacctgt tcgagaaaat cagtttctac gacaaccggg tgatggccgc
    34381 cagtgcgcgc aagcgcgatg acggtcgcta cgacgtgacc ctggacctgc acgcggccaa
    34441 gcagtacgcc gacggcaagg gcaaggaaag cgacggcaag atggatgact gggtcgagat
    34501 cggcgtgttc gccaacgggc cttcgggcaa ggaacgcgac cagaaagtgc tgtacctgca
    34561 gcgccaccac atcaccggcg ccgcgccgaa aatcaccgtg accgtggacg ggaagccgga
    34621 tgaggcgggc ttcgacccgt acaacaagct gatcgaccgg gtgagcagtg acaaccggcg
    34681 caaggtgacg atgtgaggtg atcgagcgcc ggcccccttg ccggcgctcc gcgtggaacc
    34741 tttagtgccg aggcatgctg tcgacgagag ccgcgaaggt tcagcgcacc gggggcttcg
    34801 gccccagcac cgccagcagc acgaagacca cgatcgaggc aacggtgccg agcgccgccg
    34861 gcaagccgaa cgcccaggcc gagcgcccct gctggcgcgc ccattgcgcc agatgccagg
    34921 ccgcgcccag gttgatcagc caggcaatga cgaacaccgg ccatagcacc atgcccaccg
    34981 cgcgcagcac gggcatggac accagcgcag cgacgatggc cgtgaccagg aagatcagtg
    35041 cggacctgga atggcgcgtc gcgtgcacgc tcatgaagaa agcctgcgca ccatcaccag
    35101 tacgcgatag ttgcggttgt cggcttcctg caggggcatc caacccagcc gcgaatacag
    35161 gccaccatcc agggcctcgg tctgcaggta cagctcgcaa acccccatct gcgcggcctg
    35221 cgtcacagcc tgttcaacca aaccgctggc caacccgcga ccacgatggc tttcggccac
    35281 gaacacactc cccagccagt gctcgtactg cgggaaggcc tgcatctcgc ggcgtttgag
    35341 ctgcactgcg ccgaccaact ggccgccatc gaaggcggcg atcagatgcg ggaagccgtc
    35401 ggcatcctgc actgggttga gccgttgcag ttcctgttcc agagacaggc cggcgtcgcg
    35461 gccccattgc gcgtgatacc actgcgccaa ctgctgccgt tccggtgccc cggcgggtaa
    35521 taccctgaat tccatggcca taccttgatg gggaagcgtt ctgtagtgtc gagccatgct
    35581 cgactcatcc ggtatttcgc gaaatgcagt cgagcatggc tcgactctac agaatgcgcg
    35641 gcggcggttc agccctgcgc gaaatccttc aggatctcgc cgacgccgct gggcgaaatc
    35701 tcgaagccca gcggggtgcc cgggttgatc accacgccgt agccacccgg cacgcggcgc
    35761 agcacgtcca gcatcagcca gcggatctgg tgcggggcct gttggctgta gatgccgacc
    35821 cgcgacggat cggtgaacac ggccacgtgc agggtgccct gcttgtcgaa cagcagcggg
    35881 tcgaagccgc tgccgtcggg ggtgatcaga ctgccggtca gcagcaccac ctcggaggcg
    35941 acgaaggcct ccatgaaggc gcggatcggc actgccccgt ccatcgccgc cttcagcagg
    36001 gtttcgatcg gggtctgcgg ggcgaggtcg gtcatggcgg tacggcaggc tgcgggaggg
    36061 ggctattgta gagtcgagct tgctcgactg ctcgagaagc gtgccaacca aggttggcac
    36121 ccaccagagc ggtaggcagg cgccaggaat ccgggggcgg ccagcggccg gcactaccgc
    36181 cccagccgct ggtcccgtgc ccgctggtcg gccatcgcct tgtccagctc gacctgcagc
    36241 gccggctgct gtacggcagc ctccagcaca tagaccttca ccccgtgcgc cggcacttcc
    36301 gccgtcagcg cctccttcac cttcagctcg ccgccgtcca gcgcatcgcg ccagcggccg
    36361 gcctgaacga agcgcgccac gctgaaggcc ttggcccggt cgcccttgtt cagcagcacc
    36421 agcgcggtct gcgccacgtc gccgtgctgc agcacgcgga agaacaccgc ctcgtcgtct
    36481 tgcaggcgct cgttgacctg caggccgcgc tgcagggccg gggtggcctc acgcagtcgg
    36541 gcgatgcgct gcagcggcgc gaagatcggg ctctgcggcg cggcatccac gcgcggctgg
    36601 ccaaagtagg cacggttgcc ggcgtgctcg gcgcggccac gcatgaagcc ggtttccgaa
    36661 ccgtaataga ccaccgggat gccgcgtgcg gtgaacagcc agttgtgcgc gtcgatgaag
    36721 ccgttgtcgt tggcctgcag gcgcggcatg tcgtggttgt cgtagaaact catcagctcg
    36781 tacggattgg cgtacggccc gccgctcagg tgcagcggct cggccagcgt ctcaaagccc
    36841 tttcctgcgg tgccaaaggt ctgctccagt gctccacgca gcgggaaatc gagcacgctc
    36901 acattggcgt tggccggcca ggtgtgctcg gcgatgctgg ccgcgttgta gtcgaacgct
    36961 tcgccgaaca tgaacatgcc aggatgctcg gcgcggatgc gcttgacgaa ggcatgccac
    37021 cacggatgcg gcagccagcc gatggtgtcg atgcgcagcg cgtccacgcc ctgcgcggtc
    37081 cactgcaggt aggcgccgac caggtagtcc atcaccgccg ggttgtcctg gttgaagtcg
    37141 gacagctcgg cgagattgcc atcgaagatc gaaccgtcct tgctgtcgac cgggccgatg
    37201 ctgttgtaga acgcatgcag cggattgtgc ttcgggtcca gcttctgcgg cggcaggttc
    37261 tggtggtcgg cgatcagctt tccgtccttg tcgaagatct ggccgaactg cggctgccgc
    37321 gtcggcatgg tccaggccgg cgagccatgg ttgccgacga tgtccagcac caccttcagg
    37381 ccggcgccgt gcaggccctt ggtcagcccg gcgaaatcca ggtccttgct ggggaggtgc
    37441 tcatcgagct tgtagaagtt gatgccccag tagccgtggt agccggtctt gccacggtcg
    37501 gtcagcgtgc tggtgcagct gatcggcttg ctgccggtga aggcttcatc ggggttgtcg
    37561 acgatcggcg tgatccacac cgcgccgaag ccaagattgc ggatgtactg cgcattgtcg
    37621 agcacgccgc ggaaatcacc gccaaggtag ccgatgttgc cgtccacctt gtccgggcat
    37681 ggcaccggga tatcgaaggt acgatgcgtg ccgccctggt cgcgatgatc gttggacggg
    37741 tcgccgttga cgaaacggtc ggtgaccacg aagtacaccg catcgctggc gaacggctcg
    37801 gtggtaccca cgtaatccgg gcgcggcgca gccgccgcat ggccggccag cagcaccagg
    37861 gaaacagcaa cagacagcgc accacgcatc acaccacctc cggatgggac gggacccgca
    37921 gcacgcacag gccggcgacg aacaggctgc agccacccag caccagcaca tgcattggct
    37981 ggccacccag ccaggtacgc agggcaaagc cgagcgcact ggccgcgacc agctgcggga
    38041 tcacgatgaa gaaattgaag atgcccatgt acacgcccat cttcgacgcg ggcacactgt
    38101 cggacagcaa cgcatagggc agcgacagga tcgatgccca ggcgaagccg acgccgacca
    38161 tcgacagcag cagccagtgt ggatcgcgga tgaacatcag cgagaccagc ccggcaccgc
    38221 ccagccacag attgaccagg tggctccagc gcaggccgat cacccgcacc atcggcggga
    38281 tcagtaccgc ggccagtgcg gcgaaaccgt tgtaggcacc gaacagcacg cccacccagt
    38341 tggcgccttc gttgtaggcc accgactgcg gatcggtcga accgaagtgg gtaccggcca
    38401 ccgcggcggt ggtgtagatc cacatcgcaa acaacgcgaa ccacgagaag aactgcaccc
    38461 acgccagccg acgcatggtc accggcatcg cgcgcaggtc gccgacgatg gccgccagca
    38521 tgtgcgtgcc cggcaacgcg cgcgccagtg ccagcagcag gccgtagccg gcgcacaggc
    38581 cggccagcac gtacagcatc ttgtcgccct ggcgccaggc aatcagcagc gccagcagca
    38641 cgccgattcc cagccacagg gccacctggc cccacgatgc gggcccgatg actgcggtgc
    38701 cggcatggtg cgccggtggc tcggcatcct cgaagccggc cagttccgcc ggggaatact
    38761 cgcgggtgct gagcaccgtc caggtgatcg ccgccagcag caccaccgca ccgaagtaga
    38821 acgcatagcg caccgtatcc ggcacctcgc cggcagcagc ggtgttggcc acgccgaagt
    38881 gggccaggag gaacggcagg aagctggcga caatggctcc gacgccgatg aagaaactct
    38941 gcatcgcgta acccgccggc cgctgtcgcg gtgccagctg gtcaccgacg aaggcgcgga
    39001 acggctccat cgatacgttg atcgaagcat ccagcaccca caatgtgccg gcggcgatcc
    39061 acagcgtggg cgagttcggc atcaccagca gggccagcgt ggtcagcacc gcaccgatca
    39121 tgaagaacgg acggcggcgg ccccagcgcg tccaggtgcg gtcggacagg tagccgatca
    39181 ccggctgcac cagcaggccg gtcagcggcg cagcgatcca cagccctggc accgcatcca
    39241 tgtccgcgcc cagggtctcg aagatgcggc tggcattggc gttctgcagg gcgaacccga
    39301 actggatgcc gaggaagccg aaacacatgt tccagatctg ccagaacgac agctgcggct
    39361 tggcaggacg gttcatcgtg cttcctcttc cgttgccacc tgggcgacct tcagcgcctg
    39421 cacctgggcc tggttgagca cgccctcgcg gccgcccttg cccccggtgt agtgcgcgaa
    39481 gtgctgcagc gcgctcatgt tgaagccctc ttcaagcgtg accatgcact gccccctggg
    39541 taccgtgaac gtagccgagg tcgaatcctg tccggccacg ctgtgcggca tcgtgaccgt
    39601 ctgtttctgc ataggctggc ccgggcagtg cagcaccagc tgcttcaccg ccgcggtgac
    39661 gccggtgttg atcggcccgt tcagattgct gtactgcagg cgcaggcgca cccgcccggc
    39721 gttggccgaa gtgaactgcc agcgctgctc gccctgcaac agctgctgcg gaccgacgca
    39781 gaccgtcggg ccgtgcagtg attccaacgc accctcgcgc cgggtcaggc tgaggcaatg
    39841 ttgcaggcca tcgtcgctga cgcgcacctg gccattgctg gcggcgacct gcttgccgtc
    39901 catccacagc cgctgatcgg ccgccaccgg cacgatccag ccggcgccgg cgcgcgtggc
    39961 ctgcggtgca ggcggcgtgg ccggcgcacg ggcattggca tcggcggtca tgccgcggcc
    40021 tcccgccgcg gccggtgcgg ccaccagctg caccgtggtc gtgttgccgt gggtctgcgt
    40081 gctgctggct accagcaggc catcgcccag cgacgccggg cgctccagca cgtagcgctt
    40141 ggcgccggct tccaggctga tgcgacgctg tgcgccgaac aactccggca ccagtaccgc
    40201 cggcagcttg ggttgcatgc ggccatcgtc ctgcacgccg aacacgccct cgatcaccat
    40261 cgacagatac ccggccaccg accacagctg gcgctcggag ttgaccaccg ggccactgag
    40321 cttgccttca tcgacatgca cggcctggct gaccagctcg tagttctcca tgttggaacc
    40381 ggccagcgcc gcgccctgca tcagcgatcg gatctcggcg gcaatgcgcg gtgcatcgtc
    40441 cagctggcgc gcggcacgca gcgagtaggc gctgacgaat ggccagatcg cgcggttgtg
    40501 atagatcggc tgctgcgcct cctgcggcca caccaccggg ctgccggccg gccccatcgg
    40561 gtacgccgcc agcgcgcgcc gcgcgcgctc ggccggcagt acgtcggcaa ggatgccgag
    40621 cgacaggccg agcaggtcga ccttggcata cggcaccggg tgcgcggctt cgccgatgta
    40681 gctcatgtac tggccgatat cctcgcgcca gaagcgcgca tcgatctgct ttgccagcgc
    40741 atcggcccac cccttgtagt ccgccgcgcg ggcatcgccc tgctggccgg ccagctgctc
    40801 tgccaggcgc agcgcctggt agtgcagcac gttggtggac agtgcgtacg agtcaccgat
    40861 gaagcgcacg tcctcgcgcg tccactccgg ataggtctgc tcgcgccaat cgaggaacga
    40921 ggtctcgccg cggtacaggc ccatctgcgc gtcgaacacc atcgcacggt cctgcgccag
    40981 cgtgccctgc agcgcctgcc agacctggtc ggcaaacgcc ggatcatcca gcaggtggcg
    41041 tgcggccagg aaccacacca cgcggtcgct gctgatcggc cagctgccgc cggacccggt
    41101 gtcctgcgcg acgaacaggc cgagcgtatg cccatcgcgc gcggccgaca gcttgaactg
    41161 cagcgattgc cgggtgcgct gcggatccag ccgtgccaac gccaggtcgg cggcgaagct
    41221 gacatcgcgg gtccacacat agggccagcg cgcgccggtc tggaagcatt cgcacggtac
    41281 cggtcggccc tcgtcgaatg caggatcgcg gatcgcatcc acgcgatcct ggtccatctc
    41341 ctgctgggcc agcgcgaaca gcgcatcgaa catcacgctg ccggtctggc tgcgcatcgg
    41401 tgcggctgcg atctgcactg cgcccttcgg cgcatgcagc acgaagctgc cgccggcagc
    41461 ggcttcggcg cgcgcctggc ggccgtggaa ttgcaggtcg gccgcctgcg cggtcgaacc
    41521 cagcgctgcc cccagggcag cggtcaggca aatgatcttc agcatcgaag cggcggaccg
    41581 gcttgcgccc gtcggcctcc ctccctctct gcacgcgttg taggtccgca ccgtcgttgc
    41641 cggcgggcgg gcgcggcccc tccctcaagg tgccttggcc catggtagac gcggggctgt
    41701 cggctgcgtt cggctgcata cgtattcatg gcgtcgtgcg gtagcgcacc tgccgcactg
    41761 gcttatggtc cgggtctgcc aacggcgcct tgggagggga aatgccgatg tcacccactg
    41821 ctgtacggcc cgtgctcgcg ctcgtgttcg gcctggcgtt gctgggaatg gccgcgctgg
    41881 cgcaggccgc gccgcaggtc gtcagtgtcg aatcgccggg caaggtgctc aaggccagtc
    41941 tggtactgga cggtggcacc gcccgctacc gtgtcgagcg tttcggtgag accgtggtgg
    42001 aagattcgaa gctcggtttc gccctgcgtg atggccgcct ggatcgtgac ttcacggtga
    42061 ttggccagca gcaacgcagc gtcgatgaaa gctgggaaca accctggggc gaacgccggg
    42121 tcagccgcaa ccacttcaac gaactgaccg tccgcctggc cgagaccacc ggcagcaagc
    42181 gccggctgga tgtggtgttc cgcatctacg acgatggcct gggcttccgc tacgtgttcc
    42241 ccgagcagcc gaacctgcgc gaggcgatca tcgatgacga gctgaccgag ttcgccattg
    42301 cgccggaatc gaccgcctgg tggattcctg ccggcgaacc gatccactac gaatacctgt
    42361 accagcgcac gccgctgcgt gaggtcccgc tggtgcatac gccgatgacc ctgcgcagcc
    42421 gcgatggcct gcacgtggcg atccatgagg cggcactggt ggactatgcc ggcatgtggc
    42481 tgcgccgcac cgagggccag cgcctgcgcg cgcagctttc gccttcggcc gaaggctgga
    42541 aggtgcgccg tgccctgccc tttgccacac cgtggcgcac gctgcagatc gccgaccgtg
    42601 ccggcggact ggtcgaatcg gacctgatcc tcaacctcaa cgaacccaat gcgctgggcg
    42661 atgtgagctg ggtgaaaccg gccaagtacc tgggcgtctg gtggtcgatg cacctggaca
    42721 acgagagctg ggcgagcggc cctaaacacg cggccaccac cgcgaagacg aagaaggtga
    42781 tcgacttcgc cgctgcgcat ggcttccgcg gcgtgctggt ggaaggctgg aatcccggct
    42841 gggacggtat gtgggtgggc aacggttacg acttcgattt cacccgcgcc acgcccgatt
    42901 tcgatatcga ggcactgtcg gcctatggcc tgaagaaggg ggtgcacctg atcggccacc
    42961 acgaaaccgg ctgtgccatc gaacactacg aggaccagct ggatgctgcg ctggacctgt
    43021 acgcacggtt gagcgtagac cagttcaaga ccggttacgt ctgcgacgac ggccaggttg
    43081 accgtcgcaa tccgagcggc ggcccgctgt ggcgcgagtg gcacgacggg cagttcatgg
    43141 cccgccacca cctgaaggtg gtgcaggagg ccgcgcgccg gcgcctgtcg gtgaacccgc
    43201 atgagccgat caaggacacc ggcctgcgcc gcacctaccc gaactggatc tcgcgcgaag
    43261 gcgcacgcgg catggagtac aacgcctggg gccaacctcc gaatccaccc gagcatgagg
    43321 tcaacctggt gttcacccgc atgctggccg ggccgatgga ctacaccccc ggcatcctca
    43381 gcctgaaggg ccgccacggc caggccattc ccagcacgct ggcgcggcag ctggcgctgt
    43441 acgtggtgct gtacagcccg atccagatgg ccgccgacct gcccgagcac tacctgcagc
    43501 accgcgaggc gttccgcttc atcgaagacg tggcggtgga ctgggagcag agccgcgtgc
    43561 ttgatggcga agtgggcgac tacgtgacga tcgtgcgccg cgaccgcaac agccgcgact
    43621 ggttcctcgg cagcatcacc gacgagcacg gccgcgtgct gccggtgtcg ctgggattcc
    43681 ttgagccggg cgtacgctac cgcgccgaga tctaccgcga tggcgagggc gccgacttcc
    43741 gcgccaatcc gttcgcgttc gtgcgcgaat cccgcgaggt gaccagcgcc gatgccctga
    43801 cgctggtgct ggcaccgggg ggtgggcagg ccatccgctt cactccgctt tgaatgcccc
//
LOCUS       DAOKIP010000011        43815 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.011,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000011 DAOKIP010000000
VERSION     DAOKIP010000011.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 43815)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 43815)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..43815
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.011"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            25..2112
                     /locus_tag="QEL58_000560"
     CDS             25..2112
                     /locus_tag="QEL58_000560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010483720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent siderophore receptor"
                     /protein_id="HDS1675080.1"
                     /translation="MPARRTLLSLALALPGSLVAHAALADDAPTPRTLDRVSVVAERA
                     STATKTDTALTQTPQAISVVTQQLFTDRGAHNLQEVLRYSAGVTADAWGLDTRNDATS
                     VRGLDPVQYQDGLRRSYGFSPLARPEIYGLERVEVLRGPSSVLYGAGATGGIINAMSK
                     RPTFGNVAGEVGVQLGSFDRRQLQGDIGGALNEAGTVAGRFVGLLRESNMQTDTLKDD
                     RVYLAPSISWRSERSTFSLLASYQHDRTGSSQQFLPLAATLLAPPGRRLDPSTFIGDP
                     DFDRIDSRVYSLTALFDHRFNDVLSLRSAMRYIDGKTTLQQMYVDSYSNPADPFIDAG
                     RRVVNRTAYGTRPDVQIFSADNALQFDFATGAFQHLLLAGVDYSQYREQLQRLDATGT
                     PIDIYAPVSVAPTVRGWERQPDQTSTQLGLYLQDQIRWADRVSLVLGARRDHARSKTD
                     GQPSQTDNATTYRAGLIGELGAGLSPYLSYSESFLPVAGQDLFGQAFKPMRGRQTEAG
                     IKWQPARNLLLTMAAYRITETNRQTNDPDNVLNVVQTGQIRSRGVELEGQFQFANELT
                     ITAAVARNEAEVSRSNFALEVGQRLNDTPQDLASAWVSKGFPLDDGARLRLGLGVRHV
                     GNTVSLGNGGRIITPSYTLADALVEVQVTDWTMALNITNLTDKRYYAPCRTFGDCFAG
                     YPRVVTGTITYRF"
     gene            complement(2096..3613)
                     /locus_tag="QEL58_000561"
     CDS             complement(2096..3613)
                     /locus_tag="QEL58_000561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDS1675081.1"
                     /translation="MAPVSMLPLPVRAQQRWTLLAVCLAALALPLSFSAGAVAVPVLA
                     RSAAASPTALAWVTNAFMLTFGSLLLAAGGLADRFGRRRLFLLGTAGFSAATAVVCLA
                     PTLLWLDLARGLQGVAAAAALASGTAALAQAWQGPARARVFALLGTTFGAGLALGPLL
                     AGLLLQALGWRSVFAAGGVLALAAFVLGARVLPESHGERGHLDLGGMLGFSLMLAALT
                     LALLWLGEFGLHALRVHLALLATLLLGGVFICIERVHRSPLLDLSLFSQPAFLGVQLL
                     PVATCFGYVVLLVVLPLQLLGVHGQSAAAVGLQMLALSAPMLVLPMLAARWAERIGSA
                     RLCTLGLLVCATGLYLLSRHASHPSPSQWVPLLMLIGAGTALPWGLMDGLSVSVVPVQ
                     RAGMAAGIFGTVRVAGEGIALAAVTALLALLIGQRLQGASPASLARAGAYLATGAHAQ
                     AQALLPAMRGAHLQQASAEALAILLRVLALLTAACAVLLHVLLRRPAVAVIRTDR"
     gene            3720..4619
                     /locus_tag="QEL58_000562"
     CDS             3720..4619
                     /locus_tag="QEL58_000562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014036210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDS1675082.1"
                     /translation="MDSISALLAFVRTAEAGSIVGAARVLGLSASAVGKRIARLEQDL
                     GTRLFHRTTRRVHLTDEGDLLLQRCRRALDELSEAQADLAQRQHAPSGLLRIGLPTIG
                     YRFLLPVLPGFQQRYPQVQLELDFNDRIVDVVSEGLDAVIRSGELADSSLTTRRLGGF
                     RFILCAAPGYLHAHGTPGDVSELRMHAALRFRYPTTGKLHPWQLPGVEGDAGAGLPTA
                     MTCNNMEAVLAAAIGCMGLAWMPDFLAADALTDGRLQRVLPALPTHQGQFSLLWPGGR
                     HPSARLRVFIDYAVAHLFQGEHA"
     gene            complement(4633..5511)
                     /locus_tag="QEL58_000563"
     CDS             complement(4633..5511)
                     /locus_tag="QEL58_000563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014036209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDS1675083.1"
                     /translation="MIDLRLLRQFVAVAEELHFHRAAARLHMSQPPLTAAIRRLEDEL
                     GSELIVRGNRTLGLTVAGQTLLVEARATLQQAEQALQRTREAAAGQRGSLQVGYVGSA
                     LYGRLPGLIRRFRQQYPQVRLHLQEATSRQQQLWLREQRIDVGVLIPPIPAAELQLHD
                     FDHDHLAIALPRAHALAALPEVSVAMLADEPFVSWPAGEGIGFHAQVLGLCTAAGFTP
                     RVVQEAQGMHAVLSLVAVDAGVAIVPASMSSFRPQEIVYWTVAGDAARFALQLCVRPE
                     QPSPVLCNFLDAANAS"
     gene            complement(5550..6431)
                     /locus_tag="QEL58_000564"
     CDS             complement(5550..6431)
                     /locus_tag="QEL58_000564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004147045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HDS1675084.1"
                     /translation="MQPVSRISFEGQVGLVTGAAGGLGLAYSRLLAERGAHVVMHDVG
                     AGTNGRGTDPLRIQHSADALRARGLSVQAVSDPIDHRAGCHALVQDLLQQHGHIDFLI
                     HNAGWVEYQALEAVEDDAMERMLCLAAKTPLWLAQAMWPAMRAAGGGRIVITTSDRAL
                     YPQYAQRGLSAYAMGKLAALGLVNVLALEGAGHGIVVNAVSPVAKTRMWGIDGEPDEL
                     HPEAVAHGVAFLASTRCQDGGWVLRASNGQFHALRLQEAEHVAYPRDLRAVSADSIES
                     VALQWPAIARASVDVRS"
     gene            complement(6588..7451)
                     /locus_tag="QEL58_000565"
     CDS             complement(6588..7451)
                     /locus_tag="QEL58_000565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004147043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HDS1675085.1"
                     /translation="MERSASGWINGFIGVVIFAGSLPATRLAVLELDAGFVTAARATI
                     AAVLGLGLLLLLRQPWPRRSDLPGLVVVSLGVVVGFPLLTALALRHASSAHTIVFVGL
                     LPLSTALFGVLRGGERPRPAFWLFSLLGSACVVGYAMRNGIEASLQADLLMLAAILAC
                     GLGYAEGGRLARHLGGWQVISWALLLALPVMLPLSVVMRPASFAAVGAPAWWALGYVA
                     VFSMLVGFLFWYRGLAQGGIAAVGQLQLLQPFFGLALAALLLHESVSAGMVLVTLGAV
                     VCVAGARRFSR"
     gene            7584..8963
                     /locus_tag="QEL58_000566"
     CDS             7584..8963
                     /locus_tag="QEL58_000566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012479323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent aminotransferase family protein"
                     /protein_id="HDS1675086.1"
                     /translation="MSRPLTRIESVIQTVRTRISARVDGPGSRLPSVRAQAAAMGVSV
                     STVVEAYERLAAEGVISARAGSGFYVSGPAAPLALAAMEPRLDRVVDPLWVSRQSLET
                     PAGHLKPGCGWMPSDWLYQDGMRRGLRRLARVDASQLVDYAGPLGLPALRQLLQRRAA
                     ALGIDAPMEQILLTESGTHAVDLICRFLLKPGDCVLVDDPSYFNYHALLKAHQVQAVG
                     VPYTHTGPDLDAFAQALQAHSPRLYITNSGLHNPTGAVLSASTAHRLLGLAEHSELVI
                     VEDDIFADFELHPAPRLAALDGLSRVIHVGSFSKTLSAASRCGYIAARHDWIDALTDL
                     KLATSFGGGHLAMQLMHIALTDSGYRRHMQSVRSRLADARRHALRKLHALGITPWLQP
                     EAGLFLWCQLPDGRDAAALARHCLRQGIVLAPGNAFSQSQRAADYLRFNVSQCQDPRI
                     WQVLAQALR"
     gene            9042..9716
                     /locus_tag="QEL58_000567"
     CDS             9042..9716
                     /locus_tag="QEL58_000567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HDS1675087.1"
                     /translation="MSSFSDPQAVARYAEGPLRQVPGYLALQQMSRLLLAERVPVQGR
                     VLVLGAGGGLELKAFAEAQPGWQLLGVDPAAPMLALAEQTLGPLNARVELLEGYIDDA
                     PDVRFDGASCLLTLHFLDATQRLHTLRELRKRLRAGAPLVVAHHSVPQDPSGKLRWLQ
                     RYAAFAEASGVARADAQRAIEAIAERLPLLSPEQEVALLQEAGFDDVELFYAGFSFKG
                     WVAYAT"
     gene            complement(9732..10379)
                     /gene="smqnr"
                     /locus_tag="QEL58_000568"
     CDS             complement(9732..10379)
                     /gene="smqnr"
                     /locus_tag="QEL58_000568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005408352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SmQnr family pentapeptide repeat protein"
                     /protein_id="HDS1675088.1"
                     /translation="MSPTIHHKLRIGADQYTGQKVVDQQFQQCDFSGADLTATEFINC
                     SFYDADSRSGCRFNGATLKEASFRGCDISMCHFNFIKALGLEISECRAQGADFSNASF
                     MNQITTRSGFCSGFIKKSNLRYANFSRVTLEKCELWENRWDGANVSGASFAGSDLSGG
                     QFEGIDWNSANFTDCDLTNSELGELDLRSTNLRGATLDVQQVALLMQRIGITVVP"
     gene            10506..11282
                     /locus_tag="QEL58_000569"
     CDS             10506..11282
                     /locus_tag="QEL58_000569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005408351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HDS1675089.1"
                     /translation="MSSDPSPLPAQRPQQILEELRQQGRVVAADLARRYAVSEDSIRR
                     DLRELATQGLCQRVYGGAVLPPPKERPLRERLTHDRGDKAELAARVCALLQPGQVILL
                     DAGSTNLAIAQQLPAALGLTVITNAPQIATAASYHEGTTVQLIGGRLASGGGAVGAEA
                     LAQVQRLRADVYLPGPCAVDGDTGVWAMDSEEATLKRAMVACSSRVIVAATTEKLGAR
                     GNWQIASLDEIDDLVLTTSAPPALAARFRAAGITVHPTLP"
     gene            11294..12427
                     /locus_tag="QEL58_000570"
     CDS             11294..12427
                     /locus_tag="QEL58_000570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004147013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDS1675090.1"
                     /translation="MPIANRARAEQHATRAAFFIPGFATALWATLVPFAKSRTDINDA
                     TLGLVLLCLGAGSLLAMPLSGVLAARLGCRRVMVASTLLICLSVPGLVLADTAWLLGL
                     VLFVFGAAVGAMDCTMNVQAVIVEREARRVMMSGFHAFFSIGGFLGAAAMTVLLSAQL
                     PPLASVLIGVGAMLLVMLLSASYWHRERMPHDTPMLAMPHGVVLFIGVLAFIAFLGEG
                     AMLDWSAVFLSDVRRVDASLAGIGYVTFTLTMTVARLFGDALVARVGRQRAIVFGALL
                     AASGVLVLTLVTPWQASLLGYVLVGLGCANIAPALFSLAGHQTRMPGALAITAVSTLG
                     FAGILAGPALIGFAANHFGLVAAFIGVATALLLVAMSTRWLRV"
     gene            complement(12437..13942)
                     /locus_tag="QEL58_000571"
     CDS             complement(12437..13942)
                     /locus_tag="QEL58_000571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY domain-containing protein"
                     /protein_id="HDS1675091.1"
                     /translation="MSLRSTAKRWTYLVHRWLGIGGCLLMLLWFVSGMVMLFIGYPKL
                     TPGERLAALPLLGDAVDWRGLSALPGAVQAEPEAVALTTLRGEPTYVVRSGSNVGAWS
                     ARTGQALLPVSAQQAEASAAQFAGGQAFVGAMRVDEDRWTHSRALDTHRPLYRVEVGG
                     TQPGDLYVSSHTGEVVLDAPHAQQRWNYVGAWLHWLYFLRMQSVDPVWTWGVIVLSAL
                     CTVAAISGIVVGLWRWRFRGHYRSGAKTPYVEPWMRWHHLIGLVAAAFVFTWIFSGLM
                     SMNPLGVFSGTRNAINADRYRGDRVAVDGALTEPSALLAVAGDARFRPVEIQWRRIGG
                     ELFALLLDGQGDTRIVSNVDGRLQVARQLPAARLQQQAGLMSDAPLQDFRVLQSPDAY
                     FYPRAPEAMNGAAVRRFPVAVADFDDAEATRVYLDLGSGDPLLTMGHRERVGRWLFYF
                     LHSWDLPAMLRQDVTRLGVLLLLSTAGTALCATATVIGYRRVRMKVRRRRR"
     gene            complement(13954..16092)
                     /locus_tag="QEL58_000572"
     CDS             complement(13954..16092)
                     /locus_tag="QEL58_000572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004147010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDS1675092.1"
                     /translation="MKTNPNSACLRRALLPALCAWLLQAAPALAADTAPPTTLDTVRV
                     VDARSGELSSSASAGSALGLSVLQTPAALTVISRDQLEQRGDTNLNDAISRAGAISAM
                     PHPGNGLSALSSRGFTDGASVMRLYDGLRQYGGVGITFPFDTWSIERIEVLRGPASVI
                     HGDGAIGGVINIVPKKPSRGAIENEVSVTVGSEDTARLGFGSGGALTPALAYRLDMSG
                     NYSAGWVDRGRNSDATFSGALLWQPRNDLQLTLTHAQGQQRPMRYFGTPLIDGRQLDA
                     LRHRNFNVEDSQIRFRDRWTQLDALWTPTANVEWRTRVYQIDSQRDWRNAEAYVYNPR
                     TGLVDRSGNTRITHNQDQTGLTSTLSVQGEVGGLANSFAVGLDANRAHFKHTNNTYAG
                     SSGPVDPFHPVPGTFVSDAPNLPRYRNRAEQYALFVEDRLALGERWSVLGGLRHDRAD
                     IDRTDLISGQRAFSKTYSSTGWRAGTVFALRPTLSLYAQYSQAADPVSGLLMISPANG
                     AFDLAKGRQFEVGMKQAFDGGEWTLAAYRIRKTGLLSRDPLQPDRRVQIGAQTSRGIE
                     ASLNWNFAPQWSLDANATVLKAEFEDFLETAGTPPVLVSRDGNVPPNVAERLANVWLS
                     WQFLPDWTLAGGARYVGKRYADNANTLELPGYSTTDLALTWQAAPRTRLTARMFNVFD
                     KAYYATAYYTSTQWLLGADRRVEFTVDHRF"
     gene            complement(16221..16607)
                     /locus_tag="QEL58_000573"
     CDS             complement(16221..16607)
                     /locus_tag="QEL58_000573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004147008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2946 domain-containing protein"
                     /protein_id="HDS1675093.1"
                     /translation="MLLVLLAPLVSRWLAHDHVAASATVLAMDHSLHAQHAMDGHHDH
                     HAMAMPHGEAAPKPAADPHADHEMGVDCDYCLIAARMITLLVAALLLLAPMTPVCRAL
                     RGAVQALPQRISGTLGARGPPVLRAA"
     gene            complement(16819..17073)
                     /locus_tag="QEL58_000574"
     CDS             complement(16819..17073)
                     /locus_tag="QEL58_000574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675094.1"
                     /translation="MSLNSNDAGFTERIAAVSAELAVLVSLVENHIHLQLADLADSGD
                     VDAQERFAVADPERWLENARNSLQAGVMFLERAVRQPARF"
     gene            complement(17085..17309)
                     /locus_tag="QEL58_000575"
     CDS             complement(17085..17309)
                     /locus_tag="QEL58_000575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675095.1"
                     /translation="MTDTIDEAQELEARHLQHALAQHATRARTVAPLTPIGECHNPDC
                     SEDFDNDPARLFCGPACAERYEAIHQHRNA"
     gene            17790..20126
                     /locus_tag="QEL58_000576"
     CDS             17790..20126
                     /locus_tag="QEL58_000576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012479311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toprim domain-containing protein"
                     /protein_id="HDS1675096.1"
                     /translation="MHTSHPAQDVVPAFLQVMHAHGIVPDARGREALNADGTLVRFHV
                     QGDRPGTRNGWAVLFGDQVPAGEFGSWRTGTRHAWCAKSPGTLSAAEQRAIRHRQEAA
                     RAEREQQQREREEAAAKAANVLWNRAVPADGSHPYLVRKGIPAHGLRVAPWPVRNSDG
                     LVFRHIDNTLLVPVMNAAGRIVSLQAIFPRMEPALGRDKDFLSGGRKQGCFHVIGKPL
                     AAQPIAIAEGYATAASIHQATGWCVVVAWDAGNLAAVARAWRGAVPDGVFVLCADNDQ
                     WTRQPVDNPGVTQATRAAAEIDARVAWPEFSAVHGDSDRPTDFNDLHLREGLETVRAQ
                     LLPPPAAVVEDDTAGDVALSAASASYQVPGNLSAFDAFTPFPDTSTRGRPLPTARNLA
                     ELCRRTGVTVRYNVIRKDLEILVPGLQSTVDNAKEVAAGEVMDCMHRAGMTTASFETN
                     LCQVAEANPYNPVASWITSRPWDGQSRLQAFFDTVQEAQPTRMADGRILKEVLMRRWL
                     VSGVAAAFEPDGVVARGVLTFVSKQNLGKTRWARQLAPPELQLIADGVVLDPANKDSV
                     KQVISKWIVELGEVDATFRRTDIAALKSFISRSHDEIRRPYARNESRYARRTILFASV
                     NDERFLRDATGNTRWWTVHAVALGEPARIDMQQVWSEAHALYRNGETWHLSGEELDAL
                     NATNSEHEPISPIAELIDRRFDWSLPTEHWNAHYRATEIVIAAGIDKPNRRDVNEAAA
                     YVVKRHGVRTRVVGKERAKVWLMPPRRLTLGEQAAGPF"
     gene            20283..20510
                     /locus_tag="QEL58_000577"
     CDS             20283..20510
                     /locus_tag="QEL58_000577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005408341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675097.1"
                     /translation="MPRPQLHAFEGEQLTVRQIHQRVPVLSERTIRDHLAAGRRTRTA
                     MLCFDPVAAAARGGRITQRLLRARGAGGRDS"
     gene            20552..21103
                     /locus_tag="QEL58_000578"
     CDS             20552..21103
                     /locus_tag="QEL58_000578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005412467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675098.1"
                     /translation="MIPASLDSGHRMIADTLAAFRAGPALGRTPLRPAPQAVGPLYIG
                     IAGAKHAGKDALANGLASALALPCDSFAAPLWALAELIPQQLMQSAGTGSGCDCNLPE
                     LRVRSLFARLPAGGLVPDVRLADEARAIRRRGGVVIRVSRPGHASEQALPDHLVDIEV
                     NNDGTPADLVRRTLDQLLSRGVI"
     gene            21255..21638
                     /locus_tag="QEL58_000579"
     CDS             21255..21638
                     /locus_tag="QEL58_000579"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019336915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675099.1"
                     /translation="MEVEQFASTRLKAIELFKSQPKGGKDIVSLDAIFISLCSQACTQ
                     AGDGSTTQARTVARPGRQQPPAPWFTETLAALKGKGESITVARFLMFANRFPVKRMDQ
                     VNAARWLRDAGYIPRKTGGNLVFDL"
     gene            21971..22420
                     /locus_tag="QEL58_000580"
     CDS             21971..22420
                     /locus_tag="QEL58_000580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDS1675100.1"
                     /translation="MPLTTPLMNALPDSIQTLAEVIGESAALTLVRAWPPTTSSTTGR
                     HRVIVYVPSTLPDQHRLIDILGRDVAQRLVAHFGGELLFLASCFAAGAHQRREQIAHA
                     VASGMPRDHVAREFGVSQTTIKRALRGARSTPPPAVHPALLKGYARA"
     gene            22417..22767
                     /locus_tag="QEL58_000581"
     CDS             22417..22767
                     /locus_tag="QEL58_000581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005408337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675101.1"
                     /translation="MNESDLLAGLPDWAKYLGGTSGVLIAVSLWLRQWLSSAKVDRTA
                     DEATSNTLRTLQEQLAAERTRADGLMHEREAMAQEIGQLRGEVNALRAQIAQQSVQID
                     ALLALVRKQPGAAA"
     gene            22764..23249
                     /locus_tag="QEL58_000582"
     CDS             22764..23249
                     /locus_tag="QEL58_000582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008267595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 104 protein"
                     /protein_id="HDS1675102.1"
                     /translation="MTAAAASALGGTNVAAFLDMLAVSEGTDIASQRSRDRGYDVIVG
                     GQLFNDYRDHPRVLVSLPRYGIKSSAAGRYQFLRSTWDDLRARLGLPDFGPVSQDRAA
                     VALLKQCGAYELVRLGRFDAAVSAARRIWASLPGAGYGQKEHALETLRAAYRAAGGTL
                     A"
     gene            23246..23623
                     /locus_tag="QEL58_000583"
     CDS             23246..23623
                     /locus_tag="QEL58_000583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675103.1"
                     /translation="MTPLALRLRVGLLLLVGSHAGCAWLGWTLRDRSADLAVASAQAA
                     QQASRADTALAAHQQDLANARAGARAESQRLATQAERTQQFNALQRDIDTHAKTPGRD
                     RGDADAEFVRIWREANAGHALPR"
     gene            23607..23867
                     /locus_tag="QEL58_000584"
     CDS             23607..23867
                     /locus_tag="QEL58_000584"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675104.1"
                     /translation="MPCHVDLSIAPAQLQTPPELPDLQGADDDALLRNHVAVARRYHE
                     LADQLRALLCSLGNQRGFTINGALPVAPASCGTAAGASRTLP"
     gene            23985..24536
                     /locus_tag="QEL58_000585"
     CDS             23985..24536
                     /locus_tag="QEL58_000585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012479304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675105.1"
                     /translation="MATDSPPPTLDALHSAIETAIRAHFPGLATVAFYRESSTDNMPM
                     PACLLAMTRCDRNKENSDGSGLLHALLRFEARIVVAANADGALQVRNAAVALATWLHQ
                     LGRFPGAASGAIDVIAALPEDVATAQPGLRSWVVEWSLPIALGSNAWEDTGGVVPQAF
                     YSFAPEIGRAHEPRYQPLPEHAP"
     gene            24533..25123
                     /locus_tag="QEL58_000586"
     CDS             24533..25123
                     /locus_tag="QEL58_000586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage baseplate assembly protein V"
                     /protein_id="HDS1675106.1"
                     /translation="MSAEHARLIGNLLMIGVVRELDEAAARVRVDADGMLTDWIPWLE
                     RRAGPGARSWCAPEPGEQVVLACPYGDPGQALVLGSLYQDRFAAPADSRLRQRTEFAD
                     GSSVDYDQETSTLSVNVGSGKVIVTCASAQVIASESVLLDTPSIKATGDLDVTGAITA
                     GKDISTPAEIKAGAIGLKAHKHTAQGPTAPTTPAQA"
     gene            25176..25514
                     /locus_tag="QEL58_000587"
     CDS             25176..25514
                     /locus_tag="QEL58_000587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010483777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GPW/gp25 family protein"
                     /protein_id="HDS1675107.1"
                     /translation="MRGIDANTGKSLDGLAHLHQSVRDILTTPLGSRVLRREYGSRVF
                     ELIDAPTNRSLRMDLIAATVDALARWEPRLHVENVDVSLPAPGVMILAVTGIHLPDGQ
                     AITIEGIEVR"
     gene            25517..26413
                     /locus_tag="QEL58_000588"
     CDS             25517..26413
                     /locus_tag="QEL58_000588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008267723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="baseplate J/gp47 family protein"
                     /protein_id="HDS1675108.1"
                     /translation="MASGSFTSVNLSQLPAPAVIEVLDFEAMFDESLTALQALDPTFD
                     ALLPSDPAFKILEVCTYLRLLDRQRVNDAARGVMLAYAVGSDLDHLAAIFGIARQVLD
                     PGKPQEGIPPRYEGDEDFRRRIQLGPEGFSVAGPEGAYIFHALSADARVLDASATSSS
                     PGVVVVSVLSREANGAASQGLLDAVEAKLSAADVRPLTDHVLVRSAEIVNYAINATLY
                     TFAGPDSQVVLGEARTRLDRYIAESHRLGRDVTRSGLFAALHAEGVQRVEIASPLADV
                     VVDRTQATHCSTVILTHGGNDE"
     gene            26406..27707
                     /locus_tag="QEL58_000589"
     CDS             26406..27707
                     /locus_tag="QEL58_000589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010483781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein I"
                     /protein_id="HDS1675109.1"
                     /translation="MSDPTTRLINARLRGAVDGQNLQFRHPGGALASLQSVYRTDWQG
                     RLKLSDTPRRNLQRLSATFNVPRWTGYYVKPANLSAGSFAPDGSPNAFSFPASDAIGG
                     PGQRFTGLVDEDGSAFPDGAVRTISVWLRATEPCVIGFGMRTTGPGRTQLQVGTEWRR
                     YSYTYTATADDPPRGMSIVLDRLAAGNSGLKPDSRIHVWGTQAEAGPVATSYIHAVAQ
                     PMTRIDYSMAGNVVTLNYLPPPGAIIDGDALVSVPAAAHLLPPNSTRSEQALARAAVT
                     RPLPVDITALWDADRCPAALLPWLAWALSVDEWKAYWPDKVKRARVRAAIAIQRRKGT
                     WGSVRDVVAAFGGSILIREWWEMQPQGAPHTFEAVMTIANQGGETATAKFVDDVIGEI
                     TRTKPVRSHFTFTQGMQASAEIGALAGARGTTFRRIQLIGE"
     gene            27715..29232
                     /locus_tag="QEL58_000590"
     CDS             27715..29232
                     /locus_tag="QEL58_000590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010483783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber protein"
                     /protein_id="HDS1675110.1"
                     /translation="MRLKITDAGFAKLVNPPNTGTSAVLITEIGLTSTAFTPSAGLTA
                     LPGEIKRVLTFGGKAVGDDTLHVTIRDDSASAYSLRGFGLYLGDGTLFATFGQADPIM
                     EKTAASMLLLSTDTRFSEVDTGLIEFGNAEFIYPPATAEVQGVVELATSTEAEEGADT
                     QRAVTPRGLRAFIDKRLGASAPTQLVRTLLSIATEAAFRSALGLKSAALKDEGADKGL
                     DADLLDGRHGTHYLDWRNMTGVPSSVHVPGQVILFAGATAPNGMLLCNGAAVPRASYP
                     ALFAAIGTRYGAGDGATTFNLPAMQEGTVVTHTLNPEAVGSFTQGEVIRHAHSASTAT
                     AGNHSHAISVGAGGAHSHGASASAVGDHAHGAWTDSQGHHAHTGGTSWIGDHQHLTAF
                     AESGTTYPWGADYNNHVGSRGNLDYDNPWPNTSPAGGHAHSFTTDGAGGHGHNIGMNG
                     AGGHSHTISIAQVGDHGHTASAADAGAHTHAIVVETSGGERNLPAGLRMIYCIAY"
     gene            29237..29818
                     /locus_tag="QEL58_000591"
     CDS             29237..29818
                     /locus_tag="QEL58_000591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010483785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675111.1"
                     /translation="MNVPIEPRFAHSYDPDTRAYMGKVRLQPSPDGRWNLPDYTVDLA
                     PRQPAGEYQTLRLADDGTRWEAVADFRNCMLWDTRTAMAVPNRLTLGEPLPKDVTLSE
                     PFRLDGTTPQYNAWNAGRREWTLLPDYSARPLWNKSDASFATPLPRGVGLPPTVTDLA
                     PPADRSYPIIYDDASAAWLIVADPATPTPQPQA"
     gene            29926..31125
                     /locus_tag="QEL58_000592"
     CDS             29926..31125
                     /locus_tag="QEL58_000592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail sheath subtilisin-like
                     domain-containing protein"
                     /protein_id="HDS1675112.1"
                     /translation="MAEFLHGVQVVNIDGGSRSIAVASTSVIGIVGTAPRADKTAFPY
                     NTPVLVTSRSQAAKLLANAATEVDDGTLPGQLDAIFDQSNAVVVVIRVEKGATENDTL
                     ANVLGGVNAQTGAYTGVHALLASKSVVGIKPRILAVPGFTHTHEKRDTELLANPVVAE
                     LLGIADKLRAVIIKDGPNSNDEAAKSTTALTGSKRVYVVDPALLVQSGDAIVTRYASG
                     AVAGAIARSDNERGWWASPSNLELNGVVGTARAIDFGLSDATSRANLLNQSNVATIIR
                     EGGFRLWGNRTASSDQKWQFLCVVRTADIIADSLEAAHLWAVDRGISKTYVDDVREGV
                     NAFLRGLKTQGAILGGNCWIDPDLNAADSVAQGRFYWDFDFTPTYPGEQLTFRMHMNN
                     NYVSEIF"
     gene            31128..31631
                     /locus_tag="QEL58_000593"
     CDS             31128..31631
                     /locus_tag="QEL58_000593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005412457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage major tail tube protein"
                     /protein_id="HDS1675113.1"
                     /translation="MARNVRKNFNFYVDGKGYAGNVESFTAPKLTLKTEDFQAGGMFA
                     PTEITLGHEKLEAEAVLIADDPDIMGKFHVVESKEYSFTAREALESSDGSITAVVHNM
                     RGKVKAIDRGESKSGEKGTVKISLALNYYKLTHGPLVVQELDVVNMIAKQNGVDMLAG
                     LRSALGI"
     gene            31713..32003
                     /locus_tag="QEL58_000594"
     CDS             31713..32003
                     /locus_tag="QEL58_000594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019336908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail assembly protein"
                     /protein_id="HDS1675114.1"
                     /translation="MSSKTKTANDHVIERDGYAEVTLTRPRQVNGVETAVLRMREPTV
                     EDMERFQDDKGSDAQREVRMIANLCEIPPDDLRKLPLRDYARLQSGVALFTT"
     gene            32124..34586
                     /locus_tag="QEL58_000595"
     CDS             32124..34586
                     /locus_tag="QEL58_000595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
                     /protein_id="HDS1675115.1"
                     /translation="MASNVQTTTITIGGSISGSLKSALSSTEDGLKKIGSELDRLERK
                     QRSMSKANPSLVKLKQNVAGLRQEYARLSSEGDRLRKVQTGLERVEKASTANLRSRKK
                     LGTSFKESRTLLGSAVTQLAKPVENASSFARQNQQIGSAAGLDNGQVKALGRTILAET
                     GNTNQKANDLQRAIRLLVDAGMDAQSAQTSLRAIGRTATVTGTGIDDVSSAAVGLQQS
                     FDIDPANMQSALDVLVVSSRQGGLGLKDMAKVMPVLGTSFQALKLQGNAAAATMGAAL
                     EATRRSAGGADQAATQMKGFMTSIMSPELQAKAKKGFGLDLRKVISDAQSSGGNPFDA
                     AMQAIIQATAGDQQKIGKLFGDAQAKNFVGPMIQNWDQYTRIRDKALNGSAGTTDAAY
                     ANAMQTDPEKIQGAKIAVDNLSKAFGAALLPAVGDAAVKLTELLNGVTTFVTENPKLI
                     ANTTKVVVGMLAMRSAVLGARYAWTFVKGPILAVQKVFQLFRAGNLLAQLGRFGPMAM
                     RIASVFRVVATAVGAIGGGPIAVAVAALTAGALLVRKYWEPIKAFLGGVWEGLSSAGT
                     SAMGELVNAVAPLRPAWEAVSALLGQAWDWLSRMLAPAQYTGNELSRVGEIGKLVGEA
                     LMLNFRAVIHVAGFVAEVFRMIGEVIGTVAGFIVVTFGGAWDWVAAKVSSVIDTMMTK
                     MAPFMKVVGTIMDKVGGMLGTAKDKIAFGVNTAADAYGAIRANGGIQLPPVMLAPASM
                     HSASVQPRMPNAFGTPAGRAAPEMPSPTPRSATTVQQQQTNNITIHQQPGESSEAVAR
                     RTADELQRRSAVTARGGLADRN"
     gene            34589..35056
                     /locus_tag="QEL58_000596"
     CDS             34589..35056
                     /locus_tag="QEL58_000596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005408323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDS1675116.1"
                     /translation="MKREFVTGAVDKLLSQFKANDSGNAPVLLMLGGFKFSLNTAVFR
                     EIQQSNEYRWQAQDRVGQMAALQYTGPGSASMTLPGVIYYQFRGAGNELAQLRRLAAQ
                     GTPHRLLTGKGGNLGLWVIEKIDATASEFTADSAILKQEFTLSLRKHSDGTNV"
     gene            35040..35255
                     /locus_tag="QEL58_000597"
     CDS             35040..35255
                     /locus_tag="QEL58_000597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail protein X"
                     /protein_id="HDS1675117.1"
                     /translation="MARTYSTRDGDVVDRIAYAHYGEQSPAILRAVLDANPGLAARGA
                     VLPAGVAITLPEVQRPASERKGVALWD"
     gene            35246..36319
                     /locus_tag="QEL58_000598"
     CDS             35246..36319
                     /locus_tag="QEL58_000598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019336905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage late control D family protein"
                     /protein_id="HDS1675118.1"
                     /translation="MGLNIAPAFRVVANSQDITDKIMARFKSLRITDETGNTSDTLEL
                     QLADHDPSDPIQLPPVGAELEAFIGYDGQVRRVGLYICDEVEISGFPGSMTLRARAAP
                     FETSKGGKSDLQTQKTRTWKKGTTIGDMVRRMAGEHGLNAAVSASLASIVLPLTVQSQ
                     ESDMNLLLRLAKQHDAIAKPGGGRLVFVKRGESTSASGERIPDVTLTPADGSDYRVTL
                     AAREDAGTTIAYYRDVRGAKRQEVKVGSGEPIMRLRMAYADRESAEAAARAKHREQAR
                     QTRTLSYTLPGRETLMAEATVVMQGFREGVDGQWLVKRAEHSIGSEGYVTRIECEQPN
                     SADAVKAASSAAATEGEQVASEV"
     gene            complement(36351..36731)
                     /locus_tag="QEL58_000599"
     CDS             complement(36351..36731)
                     /locus_tag="QEL58_000599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014646195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tautomerase family protein"
                     /protein_id="HDS1675119.1"
                     /translation="MPLARIDLRKGKSADYLQRVGEAIYQAMRAVDVPENDRFQIFQQ
                     HDAGTLIYDPGYLGVDRTDDFICIQITWNEGRTLEQKKALYAGIAEGLHAAVGIRRED
                     VFINLVEVKKENWSFGNGVAQYVS"
     gene            37009..37605
                     /locus_tag="QEL58_000600"
     CDS             37009..37605
                     /locus_tag="QEL58_000600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675120.1"
                     /translation="MKLTPLALAATLCAFTAHAQQDDDCPSDAQMIATMSFTELDRYE
                     ADMRNEEPSFEELCKDATDKDEEEAAGSRRHYCVKRTARYVSYNTDIGAEEYSDVTMY
                     DYVYLPRTGTTWTHRVRVVIQDVLGEASKGLTVAPFLYCGSCTEKQQFQMIGLGGQGT
                     YDFAVTLGMDTEDGRTSQNTQQDPGWRSVLGIHQGMTS"
     gene            37602..38222
                     /locus_tag="QEL58_000601"
     CDS             37602..38222
                     /locus_tag="QEL58_000601"
                     /inference="COORDINATES: protein motif:HMM:NF020904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMI1/KNR4 family protein"
                     /protein_id="HDS1675121.1"
                     /translation="MTHEEWNELLGEINRACLAAIPHDSDPSPFGFGLSPRVDRYPQH
                     PISRLATDAMARKSDWLGLPPATPAQIERAEHRLGIQLPIEYRRFLEVSNGFLLPGSA
                     ISSYLPIELVQPLSVNYPDVAAFWKTMMDGLENEVPDLLEGRLESTLQISGPPNDRSD
                     FILLDDRAENEAAELQMFRLGHVGPSGPFAMDTAMRNALAYLQWHT"
     gene            38306..38941
                     /locus_tag="QEL58_000602"
     CDS             38306..38941
                     /locus_tag="QEL58_000602"
                     /inference="COORDINATES: protein motif:HMM:NF020904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMI1/KNR4 family protein"
                     /protein_id="HDS1675122.1"
                     /translation="MNVPTNHPDVPASADDWLPLLARLNQGVLATLEERLAETHLDMG
                     MRPFAEQYPNSPLADVARRALTGTLDWCGVPGASEQAIVDAEKRLGVRLPKSYRDFLK
                     VSNGFAMPGRFIDILLPVELIRPFGQGNEEIVQIRRELVVDPVEEAFQYHLDRAIQVS
                     GTPQMGDDFILLDTHRSTAPNECDAHIYSRVDIDWYASFAHLMAERATFNL"
     gene            39407..39814
                     /locus_tag="QEL58_000603"
     CDS             39407..39814
                     /locus_tag="QEL58_000603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005415516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675123.1"
                     /translation="MTKRAASLPRLYALIADIANQVPDDIAREIECALDEQNLPVQSP
                     AFFACLNAINNAEGEDGQPCSSLTLAAAHHASLRRSMAGLSAVLDLLQAADRARSEAG
                     PDEQLGAFHTDGLIVAARQLVREANHCLEGGTA"
     gene            39867..40430
                     /locus_tag="QEL58_000604"
     CDS             39867..40430
                     /locus_tag="QEL58_000604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005415515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675124.1"
                     /translation="MDAEHLEYFKAALEGRATVGWNVWFAANQQALAQQVSRPALLRL
                     KFNHLHEAERLLAEAGVVPASTAGKRYEVYCAQLSADVVDENGRPLPAVWRAAHGGAI
                     GLLADGEHEAGRAKLLAEFSRARKRGLQQAHEWLSDVCFEGEMELSGGNAVVGRSLLA
                     VVVQAGSGHDLLDGVAMMARERLEDPG"
     gene            complement(40515..40589)
                     /locus_tag="QEL58_000605"
     tRNA            complement(40515..40589)
                     /locus_tag="QEL58_000605"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(40555..40557),aa:Val,seq:cac)
     gene            complement(40722..41075)
                     /locus_tag="QEL58_000606"
     CDS             complement(40722..41075)
                     /locus_tag="QEL58_000606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017155784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HDS1675125.1"
                     /translation="MSASNARQGILSLAVKDKAALYSAYMPFVKNGGIFVPTPKRYFL
                     GDEVFLLLTLPDSSERLPVAGKVIWVTPAGAQGNRTAGIGVQLADGAEGEGVRHKIET
                     MLAGLTSSDKPTHTM"
     gene            complement(41072..42028)
                     /locus_tag="QEL58_000607"
     CDS             complement(41072..42028)
                     /locus_tag="QEL58_000607"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta'"
                     /protein_id="HDS1675126.1"
                     /translation="MSTFSPWQQRAFEQTVAALDADRLGHGLLICGPAGLGKHEVALA
                     LADHVLARGDAAHATRTRQLIAAGTHPDLQRVSFIPNKSGDKLRTEIVIEQVREITNK
                     LALTPQYGVAQVVIVDPADAINRSAANALLKTLEEPQPGRYLWLISSDPARLPQTVRS
                     RCQRLEFKLPPRDEALAWLQQQGHSEASAREALDAARGHPGQADNWLREDGLSLRREV
                     GRELEQLAAGKTGAVELAQKWCGDDNAALRLRFAADLALAQASTDALTTPERLHKLAA
                     WFDAANRTRDLLRTTVRADLAVVELLLAWNKVNERPAARGNR"
     gene            complement(42025..42690)
                     /locus_tag="QEL58_000608"
     CDS             complement(42025..42690)
                     /locus_tag="QEL58_000608"
                     /EC_number="2.7.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014036194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTMP kinase"
                     /protein_id="HDS1675127.1"
                     /translation="MSPALLRHPRFVSLEGGEGAGKTTAINAIRDCLRSHGHEVVLTR
                     EPGGTPLAERIRGLVLKPDAEIAAEPLSAEAELLLVFAARAQHVRQVIQPALQRGAYV
                     LSDRFTDSSYAYQGGGRGLDPQWIADLERRAVGLLPGLTLLLDVDVAVGRARANGRDL
                     WPDRIESEQDDFFQRVRAVFRSRAQQDPQRFALIDAGQVQERVAADVVARVERWLQDG
                     EGA"
     gene            complement(42687..43748)
                     /gene="mltG"
                     /locus_tag="QEL58_000609"
     CDS             complement(42687..43748)
                     /gene="mltG"
                     /locus_tag="QEL58_000609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005415512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endolytic transglycosylase MltG"
                     /protein_id="HDS1675128.1"
                     /translation="MAGAKRGCLFVVTLVVVLAAVVAGAGAWFFYQQTQFADARITPT
                     AESVVIASGDGMNSVLRKLREAGVDEGQDAQWQLLARQLDAAGKLKVGEYALSTDLTP
                     RELLLRMRAGKVLQHRVTIVEGWNIRQLRAALKRAEPLLHTTDTLDDAALMQRLGFGG
                     QHPEGRFLPETYVYQRGDSDLDVLKRAHVAMEKALDEAWESRAPDLPINTPYELLTMA
                     SIIEKETALASERPQIAGVFMRRLKIGMRLQTDPTVIYGIGAAYDGNIRRRDLTTDTP
                     YNTYTRAGLTPTPIAMPSRDALMAAAQPLSGDALYFVAVGDGSGAHVFSSSLDQHNAA
                     VARYLQQLRRQRTQETPAQ"
BASE COUNT         7665 a        15266 c        14023 g         6861 t
ORIGIN      
        1 gcgatcttcc gtggaccgac cgccatgccc gcccgccgca ccctgctctc gcttgccctc
       61 gccctgcccg gcagcctcgt cgcacacgcc gcactggccg acgacgcgcc gactccccgc
      121 accctggacc gcgtcagcgt ggtggccgag cgtgccagca ccgcgaccaa gaccgacacc
      181 gccctgaccc agacgccaca ggcgatcagc gtggtcaccc agcagctgtt caccgatcgc
      241 ggcgcacaca acctgcagga agtgctgcgc tacagcgccg gcgtcaccgc cgacgcgtgg
      301 ggcctggaca cccgcaacga tgccacctcg gtacgcgggc tggatccggt gcagtaccag
      361 gatggcctcc gccgcagcta cgggttcagt ccgttggcgc ggccggaaat ctatggcctg
      421 gagcgtgtgg aagtgctgcg cggtccttcg tcggtgctgt acggcgcagg cgccaccggc
      481 ggcatcatca atgcgatgag caagcgcccg acgttcggca atgtggcggg cgaggtaggc
      541 gtgcagcttg gcagcttcga ccgcaggcag cttcagggcg acatcggcgg tgcgttgaac
      601 gaggccggca cggtggccgg gcgcttcgtc ggcctgctgc gcgagtcgaa catgcagacc
      661 gatacgctca aggacgaccg cgtctacctt gcgccttcga tcagctggcg cagcgaacgc
      721 agcaccttca gcctgctggc cagctaccag cacgacagga ccggctccag ccagcagttc
      781 ctgccgctgg cggcgacgct gctggcgccc cccggacgcc gcctcgatcc ctccacgttc
      841 atcggtgacc ctgacttcga ccgcatcgac tcgcgtgtct acagcctcac cgcgctgttc
      901 gaccaccgct tcaacgacgt gctcagcctg cgctcggcca tgcgctacat cgatggcaaa
      961 acgacgctgc agcagatgta cgtggacagc tacagcaacc cggccgatcc cttcattgat
     1021 gccggacgtc gcgtggtcaa ccgcaccgcc tacggcaccc gccccgacgt gcagatcttc
     1081 agtgccgaca acgccctgca gttcgacttc gccacgggtg ccttccagca cctgctgctg
     1141 gccggcgtcg actacagcca gtaccgggag cagctgcagc gcctggatgc gaccggcacg
     1201 ccgatcgaca tctacgcccc ggtatcggtg gcaccgacag tgcgtggctg ggagcgccag
     1261 ccagaccaga cctccaccca gctcggcctc tacctgcagg atcagatccg ctgggccgac
     1321 cgtgtttcac tggtgctggg cgcacgacgc gaccatgcac gctcgaagac cgacggccag
     1381 cccagccaga ccgacaacgc caccacctat cgcgccggcc tgatcggcga actgggcgca
     1441 ggactgtcgc cctacctgag ctacagcgaa tcgttcctgc cggttgccgg ccaggacctg
     1501 ttcggccagg ccttcaagcc gatgcgcggc cgccagaccg aggccggcat caagtggcaa
     1561 cccgcgcgca acctgctgct gacgatggcc gcgtaccgca tcaccgaaac caaccggcag
     1621 accaacgacc cggacaacgt gctgaacgtg gtgcagaccg ggcagatccg ctccaggggt
     1681 gtggagctgg agggccagtt ccagttcgcc aacgagctga cgatcaccgc cgccgttgcg
     1741 cgcaacgagg ccgaagtcag ccgcagcaac ttcgcattgg aagtgggcca gcgcctcaac
     1801 gacaccccgc aggacctggc ctcggcctgg gtctcgaagg gcttcccgct ggacgacggc
     1861 gcacgcctgc gcctgggtct gggcgtgcgc catgtcggca acaccgtgtc gctgggcaat
     1921 ggcgggcgca tcatcactcc cagctacacg ctggccgatg ccctggtgga agtgcaggtg
     1981 accgactgga cgatggcgtt gaacatcacc aatctcaccg acaagcgcta ttacgcaccg
     2041 tgccgcacct tcggtgactg cttcgccggc tacccgcggg tggtcaccgg caccatcacc
     2101 tatcggttct gatcacggcc accgctggcc gccgcagcaa tacgtgcagc agcacggcac
     2161 aggcggcggt cagcagcgcc agcaccctca gcagtatcgc cagcgcttcg gcactggcct
     2221 gctgcaggtg tgcgccgcgc atcgccggaa gcagcgcctg cgcctgtgca tgcgcaccgg
     2281 ttgccagata ggccccggcc ctggccagcg acgcgggcga cgcgccctgc agccgctggc
     2341 cgatcagcag cgcaagcaag gcggtcactg cggccaacgc aatgccttcg ccggccaccc
     2401 gcaccgttcc gaagatgccg gcggccatgc ctgcacgctg caccggcacg acgctgaccg
     2461 acagcccatc catcaagccc cacggcaagg ccgttccagc accgatcagc atcagcaacg
     2521 gcacccactg cgagggcgac gggtgcgacg cgtggcgcga cagcaggtac aggccggtgg
     2581 cacagaccag caagccgagc gtgcacaacc gcgcacttcc gatgcgctcg gcccagcgcg
     2641 cggccagcat cggcagtacc agcatcggtg cggacagggc cagcatctgc aatccgaccg
     2701 cggccgcgct ttgcccatgc acgcccaaca actgcagcgg cagtaccacc agcagcacca
     2761 cgtagccgaa gcaggtggcc accggcagca gctggacacc gaggaacgcc ggctgcgaga
     2821 acagtgagag gtccagcagg ggtgagcgat gcacccgttc gatgcagata aacaccccgc
     2881 ccagcagcag cgtcgccagc agcgccaagt gcacgcgcag ggcatgcagc ccgaattcgc
     2941 ccagccacag cagggccagg gtcagcgccg ccagcatcag gctgaagccg agcatgccgc
     3001 cgaggtcaag gtgtccgcgc tcgccgtggc tttcaggcaa cacgcgcgcg cccagcacga
     3061 aggccgccaa cgccagcacg ccacccgccg cgaacacgct gcgccacccc agtgcctgca
     3121 gcagaaggcc ggcaagcagc ggccccagtg ccaaccctgc accgaatgtc gtgcccagca
     3181 gggcaaagac gcgggcgcgc gccggtccct gccaggcctg cgccaatgcg gcggtgccgg
     3241 acgccagcgc tgctgcagcg gcaacgccct gcagcccgcg cgccaggtcc agccacaaca
     3301 gcgtgggtgc caggcagacg acggcggtgg cggcgctgaa gcctgccgta cccagcagga
     3361 acagccgccg ccggccaaag cggtcggcca ggccgccggc ggcgagcaac aggctgccga
     3421 aggtgagcat gaacgcattg gtcacccagg ccagcgcagt gggtgaggcc gccgcggaac
     3481 gggccagcac cggcaccgcg accgcgccgg ccgagaagga caacggcaac gccagcgcgg
     3541 ccaggcagac ggcaagcagc gtccagcgct gctgcgcacg gacaggcaag gggagcatcg
     3601 aaaccggggc catgcgggcc tccatccatc aggggtattg atgatggaca ggccgttatt
     3661 gatgaaaaat tggctcaatg gacgttgatt gcggcctgat gttccgcaat catgccggca
     3721 tggattccat ctctgccctg ctcgccttcg tccgcactgc ggaggcgggc agcatcgtcg
     3781 gtgccgcccg cgtcctcggc ctgtccgcgt cggcggtggg caagcgcatc gcccgcctcg
     3841 agcaggacct gggtacgcgc ctgttccatc gcaccacccg ccgcgtacac ctcaccgatg
     3901 agggcgatct gctcctgcaa cgctgccggc gtgccctgga cgagctttcc gaagcacagg
     3961 cggacctggc gcagcgacag cacgcgccca gtgggctgct gcgcatcggg ctgccgacca
     4021 tcggctatcg cttcctgctg ccggtgctgc ccggtttcca gcagcgctat ccgcaggtgc
     4081 agctggaact ggatttcaat gaccgcatcg tcgatgtggt cagcgaaggc ctcgacgcag
     4141 tgatacgcag cggtgagctg gccgattcca gcctgaccac gcggcggctg ggcgggtttc
     4201 gtttcatcct ctgtgcggcc cccggctatc tgcacgcgca cggcacgccc ggtgatgtga
     4261 gcgagctgcg catgcatgcc gcgctgcgct tccgataccc gaccaccgga aagctgcatc
     4321 cgtggcagct gccgggcgtc gaaggcgatg ccggagcggg cctgccgacg gcgatgacct
     4381 gcaacaacat ggaagccgtg ctggccgctg caattggttg catgggcctg gcctggatgc
     4441 cggacttcct tgccgctgac gcgctgaccg acggccgact gcaacgggtg ctgcctgcgc
     4501 tacccacgca ccaggggcag ttctcgctgc tatggccggg tggacgccac cccagcgcgc
     4561 gcctgcgggt attcatcgac tacgccgtgg cgcatctgtt ccagggcgaa cacgcctaag
     4621 cggccggaag gatcagctcg cgttcgcggc gtccaggaaa ttgcacagca ccggcgaagg
     4681 ttgctccggg cgcacgcaca gctgcagggc gaagcgcgct gcatcgccgg ccaccgtcca
     4741 gtagacgatc tcctgcggac ggaaactgct catgctggcc ggcacgatcg ccacgcccgc
     4801 atccaccgcc accagcgaca gcactgcatg catgccctgc gcctcctgca ctacgcgtgg
     4861 agtgaatccc gccgcggtgc acaggcccag cacctgtgcg tggaagccga tgccctcacc
     4921 cgccggccac gacacgaagg gttcatcggc cagcatcgcc acgctcactt cgggcaatgc
     4981 ggccaatgca tgcgcacgcg gcagcgcaat cgccagatgg tcgtggtcga agtcgtgcaa
     5041 ctgtagttcg gcggcaggaa tcggtggaat caacaccccc acgtcgatgc gctgctctct
     5101 cagccacagc tgctgctggc gtgaggtcgc ctcctgcaga tgcagccgca cctgtggata
     5161 ctgctggcgg aaacggcgga tcaaaccagg caaccgaccg tacaacgcgc tgccgacata
     5221 gcccacctgc aggctgccac gctgccctgc ggcggcttca cgggtgcgct gcagcgcctg
     5281 ttcggcctgc tgcagcgtcg cacgcgcttc caccagcaag gtctgcccgg cgacggtcag
     5341 gcccagggta cggttgccac gcacgatcag ctcactgccc agttcgtctt ccagccgtcg
     5401 tattgccgcc gtcagtggcg gctgcgacat gtgcagccgg gcggcagcgc ggtggaagtg
     5461 cagttcttcg gccacggcca cgaactggcg aagcaggcgc aggtcgatca tctcgatgca
     5521 ggcggtggga acccggctag ggtacgccct cagctgcgca cgtccacact ggcgcgggcg
     5581 atggccggcc actgcagggc caccgactcg atgctgtcgg cgctgaccgc gcgcagatcg
     5641 cgcggatatg caacgtgttc cgcttcctgc aggcgcaatg catggaactg gccattgctt
     5701 gcacgcagta cccacccgcc gtcctggcag cgcgtcgatg ccagaaaggc cacgccgtgc
     5761 gcgactgcct ccggatgcag ctcgtccggc tcgccgtcga tgccccacat ccgcgtcttg
     5821 gccaccggcg aaaccgcatt gaccacgatg ccgtgcccgg caccttccag tgccagcaca
     5881 ttgaccaggc cgagcgcggc cagcttgccc atcgcatagg cggaaaggcc gcgctgtgcg
     5941 tactgcggat acagcgcgcg atcggaggtg gtgatgacga tgcggccacc acccgccgcg
     6001 cgcattgccg gccacattgc ctgtgccaac cacaggggcg tcttcgcggc caggcacagc
     6061 atccgctcca tcgcatcgtc ttcgaccgct tccaacgcct ggtactccac ccagccagcg
     6121 ttgtggatca ggaagtcgat gtggccatgc tgctgcagca gatcctgcac cagcgcgtgg
     6181 caaccggcac gatgatcgat gggatcactg acggcctgca ccgatagccc acgcgcccgc
     6241 aacgcgtcgg cactgtgctg gatgcgcagc ggatcggtgc cacgaccatt ggtgccggca
     6301 cctacgtcgt gcatcaccac gtgcgcacca cgctcggcca gcaggcgact gtaggccagg
     6361 cccagtccac cggcggcacc ggtcaccagc cccacttggc cttcaaagga aattcgcgaa
     6421 acaggttgca tccgcacagc ttcaaccacg ggcgggggca ccggccaata ccgttgacca
     6481 caccccacga tatgcccgcg ctatcgccag aaaaggggac ggaggggatt aagtcgcttc
     6541 cggcacacaa ggggcaatag cgacttaatc ccctccgtcc cctttttcta gcggctgaag
     6601 cggcgcgcgc ccgccacgca gaccaccgcg cccagtgtta ccagcaccat gccggcgctg
     6661 accgattcgt gcagcaacag cgccgccaac gccaggccga agaatggctg cagcagctgc
     6721 agctggccga ccgcggcgat tccaccctgc gccagcccgc ggtaccagaa caggaagccg
     6781 accagcatgc tgaacaccgc cacgtagccc agtgcccacc acgcaggcgc gcccaccgcg
     6841 gcgaacgagg ccgggcgcat caccacgctc agtggcagca tcaccggcaa cgccagcagc
     6901 agcgcccagc tgatcacctg ccagccgccg agatggcggg ccagccggcc gccttcggca
     6961 tagccgagcc cgcaggcaag gatcgcggcc agcatcagca ggtcggcctg cagcgaggcc
     7021 tcgatgccat tgcgcatcgc gtagccgacc acgcaggcgc tgcccagcag cgagaacagc
     7081 cagaaggcgg ggcgcggccg ctcgccgccg cgcagcaccc cgaacagtgc ggtactcagt
     7141 ggcagcaggc cgacgaacac gatggtgtgc gccgatgacg catggcgcag ggccaacgcg
     7201 gtcagcagcg ggaaaccgac caccacgcca agactgacca ccaccagccc cggcaggtca
     7261 ctgcgccgcg gccagggctg gcgcaacagc agcaacaggc caaggccaag cactgcggcg
     7321 atggtggcgc gtgcggcggt gacgaacccg gcgtccagtt caagcaccgc caggcgggtg
     7381 gccggcaacg agccggcgaa gatcaccaca ccgatgaagc cattgatcca accgctcgct
     7441 gaccgttcca cgcctgtatt cctgtcatgc caggcatcgc ccggcggaac ctgcatggga
     7501 acatccatcg ccgggtcacc ccagctacaa tccagtacag tcgcaagtaa ctgtactgcc
     7561 cacacttcca ctacagtccc tccatgtcgc gtccgctcac ccgcatcgaa tcagtcatcc
     7621 agaccgtccg cacccgcatc agcgcgcgcg tggatggccc cggttcccgc ctgccgtcgg
     7681 tgcgggcgca ggcggcagcg atgggcgtat cggtctccac cgtggtcgag gcttacgagc
     7741 gcctggcggc cgaaggcgtg atcagcgcgc gcgcgggctc tggcttctac gtcagtggcc
     7801 cggccgcacc gctggcgctg gccgcgatgg agccgcggct ggatcgcgtg gtggacccgc
     7861 tgtgggtatc gaggcaatcg ctggaaacgc ccgcgggcca cctcaagccg ggctgcggct
     7921 ggatgcccag cgactggctg taccaggacg gcatgcgtcg tggcctgcgc cggctggcac
     7981 gtgtcgatgc atcgcagctg gtcgactacg ccggcccgct cggtctgccc gcattgcgcc
     8041 agttgctgca gcggcgcgct gctgcactgg gcatcgacgc gccgatggaa cagatcctgc
     8101 tgaccgaatc gggcacgcac gcggtcgacc tgatctgccg cttcctgctc aagcccggcg
     8161 actgcgtgct ggtggatgac cccagctact tcaactacca cgcgctgctg aaggcacatc
     8221 aggtgcaggc cgtaggcgtg ccgtacaccc acaccgggcc ggaccttgat gcgtttgcgc
     8281 aggcgctgca ggcacattcg ccgcggctgt acatcaccaa ttcgggcctg cacaacccga
     8341 ccggcgccgt gctttccgcc agcaccgctc accgcctgct gggcctggcc gagcacagcg
     8401 aactggtcat cgtcgaggac gacatcttcg ccgacttcga gctgcatccc gccccccggc
     8461 ttgccgcgct ggatggtctg tcgcgggtga tccacgtcgg cagtttttcc aagacgctgt
     8521 cggcggcctc acgctgcggc tatatcgcgg cgcgccacga ctggatcgac gcgctgaccg
     8581 acctgaagct ggcaaccagc ttcggcggcg gccatctggc gatgcagctg atgcacatcg
     8641 cgctgaccga cagtggttat cgtcgccaca tgcagtcagt acgttcgcgc ctggccgatg
     8701 cacgccggca tgcgctgcgg aaactgcacg cgctgggtat caccccgtgg ctgcagcccg
     8761 aagccggcct gttcctgtgg tgccagctgc ccgatggccg cgacgccgcg gccctggcgc
     8821 ggcactgcct gcgccagggc atcgtgctgg caccgggcaa cgccttcagc caatcgcagc
     8881 gcgcggccga ctatctgcgc ttcaatgtct cgcaatgcca ggacccgcgc atctggcagg
     8941 tgttggcgca ggccttgcgc tgagcgcgat gccggtgccc tgcggcaccg gcacttgcat
     9001 gccacggtac agtggtagtt ccccgttgca ggattgcccg catgtcgtcg ttctctgatc
     9061 cgcaggccgt ggcccgctat gccgagggcc cgttgcgcca ggtgccgggc tacctcgccc
     9121 tgcagcagat gagtcgcctg ctgctggccg aacgggtccc cgtgcagggg cgcgtgctgg
     9181 tgctgggcgc cggtggcggc ctggagctga aagcctttgc cgaggcacaa ccgggctggc
     9241 agctgctggg cgtggacccg gccgcaccga tgctggcgct ggctgagcag acgctgggcc
     9301 cgttgaacgc acgcgtcgag ctgctggaag gctacatcga cgatgccccg gacgtgcgct
     9361 tcgacggcgc cagctgcctg ctgaccctgc acttcctcga cgccacgcaa cgcctgcata
     9421 cgctgcgcga actacgcaag cgactgcgcg cgggtgcccc tctggttgtc gcccaccaca
     9481 gcgtgccgca ggacccgtcc ggcaagctgc gctggttaca gcgctacgca gcgttcgccg
     9541 aagcctccgg cgttgcccgc gccgacgcgc agcgcgcgat cgaggccatt gccgagcggc
     9601 tgccgctgct gtcacccgag caggaggtcg cgctgctgca ggaagccggc ttcgacgacg
     9661 tggagctgtt ctatgcgggc ttcagcttca agggctgggt ggcgtacgcg acgtgatgca
     9721 tccgggccag atcacggcac cacggtgatg ccgatgcgct gcatcaacag cgccacctgc
     9781 tgcacgtcca atgtcgcgcc gcgcaggttg gtactgcgca ggtccagctc gccgagctcg
     9841 gagttggtca ggtcgcaatc ggtgaaattg gcgctgttcc agtcgatgcc ctcgaactgg
     9901 ccaccggaca ggtccgagcc ggcgaaactg gcgccgctca cattggcgcc gtcccagcgg
     9961 ttctcccaca gttcgcactt ctccagcgtc acccgcgaga agttcgcgta gcgcaggttc
    10021 gacttcttga tgaagccgct gcagaacccg ctgcgcgtgg tgatctggtt catgaaactg
    10081 gcgttgctga agtccgcgcc ctgcgcccgg cattcactga tctccaggcc cagtgccttg
    10141 atgaagttga agtggcacat gctgatgtcg cagccacgga agctggcttc cttcagcgtg
    10201 gcgccgttga agcggcaacc gctgcggctg tcggcgtcgt agaagctgca gttgatgaac
    10261 tcggtcgcgg tcaggtccgc gccggaaaaa tcgcattgct ggaactgctg gtcgaccact
    10321 ttctggccgg tgtactggtc ggcgccgatg cgcagcttgt ggtgaatggt gggggacatc
    10381 aggaattcca tgccagggag cgcggccatg atgccgggca agcgccgtat tcccaacccc
    10441 gccagcgccg cggaacgcgg ttcctgatat tgcacgttca tgcacagtaa tgcatgattc
    10501 ccggcatgag ctccgatccc agcccccttc ccgcccagcg cccccagcag atccttgagg
    10561 aactgcgcca gcagggccgt gtggtggccg ccgacctggc gcgccgctat gccgtctctg
    10621 aagattcgat ccgccgcgac ctgcgcgaac tggccaccca gggcctgtgc cagcgtgtct
    10681 acgggggggc ggtgctgccg ccgccgaagg aacgcccgct gcgtgagcga ttgacccatg
    10741 accggggcga caaggccgaa ctggccgctc gcgtttgcgc cctgctgcaa ccgggccaag
    10801 tgatactgct tgatgccggg tcgaccaacc tggccatcgc ccagcagctg cccgccgcgc
    10861 tcgggctgac ggtgatcacc aatgctccgc agattgctac ggccgccagc tatcacgaag
    10921 gcaccaccgt gcagctgatc ggcggccgcc tggccagcgg tggcggcgcg gtcggtgccg
    10981 aagcgctggc ccaggtgcag cgcctgcggg ccgatgtgta cctgccgggt ccgtgcgcgg
    11041 tggacggcga caccggcgtg tgggcgatgg attcggaaga agccacgctg aagcgcgcaa
    11101 tggtggcgtg cagcagccgc gtcatcgtcg ctgccaccac tgaaaagctc ggcgcgcgcg
    11161 gcaactggca gatcgccagc ctcgacgaga tcgacgatct ggtgctgacc acgtcggcgc
    11221 ctcccgcact ggccgcgcgc ttccgtgccg ccggcatcac agtgcatccc accctgccct
    11281 gaccgaaccg ctcatgccta ttgccaaccg cgcgcgtgcc gaacagcacg cgacccgcgc
    11341 tgcattcttc attcccggct tcgctaccgc gttatgggcc acgctggtgc cgttcgccaa
    11401 gtcacgcacg gacatcaacg atgccacgct gggcctggtg ctgctctgcc tgggtgccgg
    11461 ttcgctgctg gcgatgccgc tgtccggcgt gctcgccgcg cgcctaggct gccgtcgggt
    11521 gatggtggcc agcacgttgc tgatctgcct cagcgtgcca gggctggtgt tggccgacac
    11581 ggcctggctg ctgggactgg tgttgttcgt gttcggtgcc gcggtggggg cgatggactg
    11641 cacgatgaac gtgcaggcgg tgatcgtcga gcgcgaagcc cggcgcgtga tgatgtccgg
    11701 cttccatgcc ttcttcagca tcggcgggtt ccttggtgcg gccgccatga ccgtactgct
    11761 ttcggcacag ctgccaccgt tggcgtcggt gctgattggc gtaggcgcca tgctactggt
    11821 gatgctgttg tcggcgtcgt actggcaccg cgagcgcatg ccgcatgaca cgccgatgct
    11881 ggcgatgccg cacggcgtgg tgctgttcat cggcgttctg gcgttcatcg ccttccttgg
    11941 cgaaggcgcg atgctggact ggagcgcggt gttcctcagc gacgtacgtc gtgtcgacgc
    12001 cagccttgcc ggcatcggct atgtgacctt caccctgacc atgaccgtcg cgcgcctgtt
    12061 cggcgatgcg ctggtggcac gcgtcggtcg ccagcgcgcg atcgtgttcg gcgccctgct
    12121 cgccgccagc ggcgtgctgg tgctgaccct ggtcacgccc tggcaggcat ccctgctcgg
    12181 ctatgtgctt gtgggcctgg gttgcgccaa catcgcaccg gccctgttct cgctggccgg
    12241 ccaccagacc cgcatgccgg gtgcactggc gattacagcg gtgtccacgc ttggctttgc
    12301 cggcatcctc gccggcccgg cgctgatcgg cttcgccgcc aatcacttcg gcctggtcgc
    12361 cgcgttcatc ggcgtggcga cggccctgtt gctggtggcg atgtccaccc gctggctgcg
    12421 ggtgtgaccc gacgcatcag cgccgccgac gccgcacctt catccgcacg cgccgatagc
    12481 cgatcacggt agcggtcgcg cacagcgcgg tgcctgccgt gctcagcagc agcaacaccc
    12541 ccagccgggt gacgtcctgc cgcagcatcg ccggcaggtc ccagctgtgc aggaagtaga
    12601 acagccagcg ccccacccgc tcgcggtgcc ccatcgtcaa cagcgggtca ccgctgccca
    12661 ggtcgaggta gacacgcgtc gcctcggcat catcgaagtc ggcaaccgcc accggaaagc
    12721 ggcgcacggc cgcaccgttc atggcctcgg gcgcgcgcgg atagaaatag gcatcaggcg
    12781 actgcaggac gcggaagtcc tgcagcgggg catccgacat caggcctgcc tgctgctgca
    12841 ggcgcgcagc aggcaactgg cgcgcgacct gtagccgccc gtccacattg gacacgatgc
    12901 gggtatcgcc ctgcccgtcc agcaacagcg cgaacagctc gccaccgatg cgacgccact
    12961 ggatttccac cggccggaac cgcgcgtcgc cggccaccgc cagcaacgcc gacggttcgg
    13021 tcagcgcccc atccaccgcc accctgtctc cgcggtaacg gtcggcattg atcgcattgc
    13081 gggtgccgct gaacacgccc agcggattca tcgacatcaa gccgctgaag atccaggtga
    13141 acacgaaggc agcagcgacc aacccgatca ggtggtgcca gcgcatccag ggttcgacat
    13201 acggcgtctt cgcgccggag cggtagtgtc cgcggaaacg ccagcgccac aggccaacca
    13261 cgatgccgct gatcgccgcc acggtgcaca gcgcggacag cacgatcacc ccccacgtcc
    13321 atacaggatc caccgattgc atgcgcagga aatacagcca gtgcagccac gcgcccacat
    13381 agttccagcg ctgctgcgca tgcggtgcat ccagcaccac ctcgcccgtg tgcgaggaca
    13441 cgtagaggtc cccaggttgg gtaccgccca cctccacccg gtacagcggc cgatgcgtat
    13501 ccagcgcgcg cgagtgcgtc cagcgatcct catccacacg cattgcgccg acgaacgcct
    13561 gcccgccggc gaactgcgcg gccgacgctt cagcttgctg tgccgacact ggcagcagcg
    13621 cctggcctgt ccgcgccgac cacgcgccga cgttgctgcc gctgcgcacc acataggtgg
    13681 gttcgccacg cagcgtggtc agcgccaccg cttccggctc ggcctgtaca gcgcctggca
    13741 gcgccgacag ccctcgccaa tcgacggcat cacccagtag cggcagcgcc gccaggcgct
    13801 caccgggtgt cagctttgga tagccgatga acagcatcac catgccgctg acgaaccaca
    13861 gcaacatcaa caggcatcct ccgatgccca gccagcgatg caccaggtag gtccagcgct
    13921 tggcggtgga acgcagcgac atggcccttg ccctcagaag cgatgatcga cagtgaattc
    13981 gacgcgccgg tccgcaccca acaaccactg tgtactggtg tagtacgcgg tggcgtagta
    14041 cgccttgtcg aacacattga acatgcgtgc agtcagccgc gtccgcggcg cggcctgcca
    14101 ggtcagtgcc aggtcggtgg tgctgtagcc cggcagttcc agcgtgttgg cgttgtcggc
    14161 gtagcgcttg ccgacgtagc gcgcgccacc ggccagggtc cagtcgggca ggaactgcca
    14221 gctcaaccac acattggcca ggcgttcggc cacattcggc ggcacattgc cgtcgcgaga
    14281 gaccagcacc ggcggcgtcc ccgcggtttc caggaagtcc tcgaactcgg ccttcagcac
    14341 cgtcgcgttg gcatcgagcg accactgcgg cgcgaagttc cagttcaacg aagcctcgat
    14401 gccacgcgaa gtctgcgcgc cgatctgcac gcggcggtca ggctgcagcg ggtcgcggct
    14461 gagcagaccg gtcttgcgga tgcggtaggc ggccagcgtc cactcgccac cgtcgaaggc
    14521 ctgcttcatg cccacctcga actgccggcc cttggccagg tcgaacgccc cgttggccgg
    14581 gctgatcatc agcaggccgc tgaccgggtc cgctgcctgc gaatactgcg cgtacaggct
    14641 cagcgtcggg cgcagcgcaa acaccgtgcc cgcgcgccac ccggtgctgc tgtaggtctt
    14701 cgagaacgca cgctggccgc ttatcagatc ggtgcgatcg atgtcggcac gatcgtggcg
    14761 cagcccaccc agcaccgacc agcgctcacc cagtgccagc cggtcttcca cgaacagcgc
    14821 atactgctcg gcgcggttgc ggtagcgcgg caggttcggc gcatcgctga cgaacgtgcc
    14881 gggcaccgga tggaacggat cgaccggacc cgaactgccg gcataggtgt tgttggtgtg
    14941 cttgaagtgc gcacggttgg catccagtcc caccgcgaaa ctgttcgcca ggccgcccac
    15001 ctcaccctgc acgctcagcg tcgaggtcaa cccggtctgg tcctggttgt gggtgatccg
    15061 ggtgttgccg gaccgatcga ccaggccggt gcgtgggttg tagacatagg cctcggcgtt
    15121 gcgccagtcg cgctggctgt cgatctggta gacgcgggtg cgccactcca cgttcgcggt
    15181 gggcgtccac agcgcgtcga gctgggtcca gcggtcacgg aagcggatct ggctgtcttc
    15241 cacgttgaag ttgcggtggc gcagcgcgtc cagctggcga ccgtcgatca acggcgtgcc
    15301 gaagtagcgc atcggcctct gctggccctg cgcatgggtg agggtcagct gcaggtcatt
    15361 gcgcggctgc cacagcagcg caccggagaa ggtggcgtcg ctgttgcgcc cgcggtcgac
    15421 ccaccccgcg ctgtaattgc cactcatgtc cagccggtac gccagcgccg gagtcagcgc
    15481 gccgccgctg ccgaatccaa ggcgtgcggt gtcctcgctg ccgacggtca cgctgacttc
    15541 gttctcgatg gcgccgcgcg agggcttctt cggcacgatg ttgatgaccc cgccgatcgc
    15601 gccgtcgcca tggatcactg aggccggccc acgcagcact tcgatgcgct cgatcgacca
    15661 ggtatcgaac gggaaggtga tgcccacgcc cccgtactgg cgcaacccgt catacaaccg
    15721 catcaccgac gccccatcgg taaaaccacg gctggacagc gcgctcaggc cgttgccggg
    15781 gtgcggcatg gcgctgatcg cacctgcgcg gctgatcgca tcattgaggt tggtatcgcc
    15841 gcgctgctcc agctggtcgc ggctgatgac ggtgagcgcg gccggcgtct gcagcacgct
    15901 caggcccagc gcggaaccgg cgctggcgga ggaggacagc tcgccgctgc gggcatccac
    15961 cacgcgcacg gtatccagcg tggtgggagg cgccgtatcg gcggcaaggg caggcgccgc
    16021 ctgcagaagc caggcacaca gcgcaggcag cagcgcccgg cgcaggcacg cggagttggg
    16081 gttggttttc attgggtcac ggcatgcaag gccaccccgc attgcagggc agcaatcaga
    16141 aagggatagg cacgcgcgtg cgggcaccgg ccgtggccgg cagcctcatg gcaggaagat
    16201 cactgcagcg cgcgtgcggc tcaggcggcc ctgaggaccg gtggcccacg cgctcccagg
    16261 gtgccgctga tccgttgcgg cagggcctgc accgccccgc gcaacgcacg gcagaccggc
    16321 gtcatcggtg ccagcagcag caacgctgcc accagcaggg tgatcatccg tgcggcaatc
    16381 aggcagtaat cgcagtccac gcccatctca tgatcggcat gggggtcggc agcaggcttc
    16441 ggtgccgctt cgccgtgcgg catcgccatc gcatgatggt cgtggtggcc gtccatcgca
    16501 tgctgtgcgt gcaggctgtg gtccatcgcc aacaccgttg cgctggccgc aacgtggtca
    16561 tgcgccagcc agcggctcac cagcggggcg agcagcacca gcagcatggc aagccatgcc
    16621 agagcctgga accggcggtg gagaacagaa cggcgcacgc ggccattcta cggggcctcg
    16681 cccaaccttg gaccacgttc agggttgctg cacgggcggt gcgacgttat gacgcagccc
    16741 ccgccgtgca gcgcgctgcg tactccggtg gggacggaag gcgaccacac cggccccttc
    16801 cgcccccacg cggcaacgct agaaccgggc gggctgccgc accgcgcgtt ccaggaacat
    16861 cacgcccgcc tgcaggctgt tgcgggcgtt ctccaaccag cgctccggat cggcgaccgc
    16921 gaatcgctcc tgcgcatcca cgtcacccga atcggccaga tcggccaact gcagatggat
    16981 gtggttctcc accaggctca ccagcacggc gagctcggcc gacactgcgg cgatgcgttc
    17041 ggtgaagcca gcgtcgttgc tgttcagaga catgtcccct gttcctatgc gttgcggtgt
    17101 tgatggatgg cttcgtagcg ctcggcacag gcaggcccac agaacagcct ggccggatcg
    17161 ttgtcgaagt cttcgctgca gtccgggttg tggcattccc caatgggcgt gagaggggca
    17221 acagtgcggg cccgcgttgc gtgctgggcc aatgcgtgtt gcagatggcg cgcttccagt
    17281 tcctgcgctt cgtcgatggt gtccgtcatg caggctgtat tttatcgggg ggtagtcgca
    17341 ccgattgaga acgcatcaac ggcgttggat gagtcgctcc cggcattggt tcggcgtttg
    17401 tggttgcagt ggatttcagg catgcaggct ccttgtgcat gggcgcccgg aagggcggaa
    17461 ggcgagtcgg aaggccgtat ctgacggcaa cggcatcatc ggaaaaacgg ttctcgccaa
    17521 ctgcgacacg ccgccgcaga agcgacaatc tgcgaaagtc atcgcagatc ctcatgacac
    17581 ccggccgcac tgtcgggatc agggatgcaa ggtgtcgtaa ggtgttgcaa aagagaggtc
    17641 attccgacac catggccgca tcaccgcctc ccctctgcgg ctgaccctgc cgcgtcggcc
    17701 ggtcgccacg tgcactgcgc ccggcatgaa tcacgctgcg catcgacagg ctgcggtgaa
    17761 ccggaccacg cttcaagggg cttcgccgaa tgcacacatc gcacccagcg caggacgtcg
    17821 ttcctgcgtt cctgcaggtc atgcacgcac acggcatcgt gccggacgca cgcggccgcg
    17881 aggcactcaa tgccgacggc acactggtgc gcttccatgt gcagggtgac cgccccggca
    17941 cacgcaatgg gtgggccgta ctgttcggcg accaggtacc ggctggcgag ttcggcagct
    18001 ggcgcaccgg cacccgtcat gcctggtgcg ctaagtcacc cggcacgctc agcgccgccg
    18061 agcagcgcgc catccgccac cgccaggagg cggctcgtgc cgaacgcgag cagcagcagc
    18121 gcgaacgcga ggaggccgcc gccaaggccg ccaatgtcct gtggaaccgc gccgtaccgg
    18181 cggacggcag ccatccctat ctggtgcgca agggcatccc tgcgcatggc ctgcgcgtgg
    18241 cgccgtggcc ggtacgcaac agcgacggcc tggtcttccg ccacatcgac aacacgctgc
    18301 tggtgccggt gatgaacgct gccggtcgga tcgtttcgct gcaggcgatc tttccgcgca
    18361 tggaacccgc actgggacgc gacaaggact tcctgtccgg tggccgcaaa caggggtgtt
    18421 tccatgtcat cggcaaaccg ctcgctgcac agccgatcgc catcgccgag ggctatgcca
    18481 ccgccgcctc catccatcag gccaccggtt ggtgcgtggt ggtcgcctgg gatgccggca
    18541 acctcgccgc agtcgcccgc gcctggcgcg gcgccgtgcc cgatggtgtg ttcgtgctct
    18601 gcgcggacaa cgatcaatgg acccggcagc ccgtggacaa tcccggcgtc acccaggcaa
    18661 cgcgcgccgc tgcggaaatc gatgcacgcg tggcatggcc cgagttctcc gcggtgcacg
    18721 gtgacagtga ccgccccacc gacttcaacg acctgcatct gcgcgaaggg ctggagacgg
    18781 tccgcgccca gctcctgcca ccgccagccg ccgtggtgga agatgacacg gccggcgacg
    18841 tcgcactttc ggcagccagc gcgagctatc aggtgcctgg caacctgtcc gcattcgatg
    18901 ccttcacgcc ctttcccgat accagcacgc gcggccgccc attgcccaca gcgcgcaatc
    18961 tggccgaact gtgccggcgc accggcgtga ccgtgcgcta caacgtcatc cgcaaggacc
    19021 tggagatcct ggtgccgggc ctgcagagca cggtggacaa tgccaaggaa gtggctgccg
    19081 gtgaagtgat ggactgcatg caccgcgctg gcatgaccac cgccagcttc gaaaccaacc
    19141 tgtgccaggt ggccgaagcc aacccctaca atccggtcgc cagctggatc acctcacgcc
    19201 cgtgggatgg ccagtcccgc ctgcaggcct tcttcgatac ggtgcaggaa gcgcagccca
    19261 cccgcatggc cgacgggcgc atcctgaagg aagtactgat gcgacgctgg ctggtctccg
    19321 gcgtggcggc ggcctttgaa ccggatggcg tggtggcgcg gggtgtgctg acgttcgtct
    19381 cgaagcagaa tctgggcaag acacgctggg cccggcagct ggcaccgccg gaactgcagc
    19441 tgatcgccga cggcgtggtg ctcgatccgg ccaacaagga cagcgtcaag caggtcatct
    19501 ccaagtggat cgtcgaactg ggtgaagtgg atgccacctt ccgccgcacc gatatcgccg
    19561 cgctgaaatc gttcatctcg cgcagccatg atgagatccg ccgtccatac gcgcgcaacg
    19621 agtcgcgcta cgcgcgccgg accatcctgt ttgccagtgt caatgacgag cgcttcctgc
    19681 gcgacgcgac cggcaacacg cgctggtgga ccgtgcatgc cgtggcactg ggcgaaccgg
    19741 cgcgcatcga catgcagcag gtgtggtccg aggcccatgc gctgtaccgc aacggcgaga
    19801 cctggcacct gtccggtgag gagctggatg cgctgaatgc caccaacagc gagcacgaac
    19861 cgatctcgcc gattgccgaa ctgatcgacc gccgcttcga ctggtcgctg ccgaccgagc
    19921 actggaacgc acactaccgc gccaccgaga tcgtcattgc cgcaggcatc gacaaaccga
    19981 accgccgcga cgtcaacgag gcggccgcct atgtggtcaa gcgccatggc gtacgcaccc
    20041 gcgtggtcgg caaggagcgg gccaaggtct ggctgatgcc gccgcgcagg ctcacccttg
    20101 gcgagcaggc ggcaggcccg ttctagagcc acgttccccc cgggtgcacg agaagggcat
    20161 tggcggggac caccaccggc ggcacgatcc gagatgcaag tagatgcaag gtgttgacta
    20221 aggcggcccg tgaaggcaag atgcctatct cggccacgcc accttccagg agcgcttccg
    20281 tcatgcctcg tccccaactg cacgccttcg aaggcgaaca gctgaccgtg cggcagatcc
    20341 accagcgggt accggtgctg tccgaacgga ccatccgcga ccaccttgcc gctggccgtc
    20401 gtacccgcac cgccatgctc tgctttgacc ctgtcgcggc cgccgcccgc gggggacgca
    20461 tcacccaacg cctgctgcgc gcgcgcggtg ctggcggtcg cgattcctga cccatcgccg
    20521 gctgccacct tcttccagga gtagattccg catgattccc gcctccctcg acagtggcca
    20581 tcgcatgatc gccgacaccc tggccgcatt ccgtgccggc cccgccctgg gccgcacgcc
    20641 gctgcggcct gccccgcagg cggtgggccc gctctacatc ggcatcgccg gcgccaagca
    20701 tgcgggcaag gacgccctgg ccaatggact ggcctctgca ctggcgctgc cctgcgacag
    20761 ctttgcggca ccgctgtggg cgctggctga gctcatccct cagcagttga tgcagagcgc
    20821 cggcaccgga tcggggtgtg attgcaacct ccccgagctg cgggtgcgct cgttgttcgc
    20881 acgcctgcct gcaggcggac tggtgccgga tgtgcgcttg gccgatgaag cccgcgcgat
    20941 ccgccgccgt ggcggtgtcg tgatccgcgt cagccgtccg ggccatgcca gcgaacaggc
    21001 cttgccggac cacctggtcg acatcgaagt aaacaatgac ggcaccccgg ccgatctggt
    21061 gcgcaggacg ctggaccagc tgctgtcgcg cggcgtgatc tgaacgcggc acggggccgt
    21121 gtgatctctc ttcccactca tccgagcgca ggtcgtggcc catcatcggc gaaaatgatg
    21181 taaggtcgcc tcatcaccga cgacacctgt cgtcaccctg catcccccaa tcattttcgc
    21241 agagaggaaa ccccatggag gtcgaacagt tcgcgtcgac gcgcctcaag gccatcgaat
    21301 tgttcaagtc ccagcccaag ggtggcaagg acatcgtgag cctggatgca atcttcatct
    21361 cgctgtgctc gcaggcctgc acccaggcgg gcgatggcag cacgacgcag gcccgtaccg
    21421 tggcccgccc cggcaggcag cagccgcccg caccgtggtt caccgaaacc ctggccgccc
    21481 tgaagggcaa gggtgaatcg atcacggtgg cgcgcttcct gatgttcgcc aaccgctttc
    21541 cggtcaagcg catggaccag gtcaacgcgg cgcgctggtt gcgcgacgcc ggctacatcc
    21601 cacgcaagac cggcggcaac ctggtgttcg acctttgacc cagccccacc tgcagtcctg
    21661 aagccccggc atcgtccggg gctttttcgt ttccgggcct gcgcccatgc gtgaggacgg
    21721 gccgcggggg gccatcctca ccccatcccc accgcgttcc cttgaccagc ctctgtttcc
    21781 acggggtgag gacagcgagt acaggattac ggaaaacaac cgcagcaatg gccgcccggc
    21841 agcaaccgtt gcaggcatcc gcagcgtact cctcacctgt gctcaggctc attgaatgcc
    21901 ttcagcacat cgcaccgaaa gtagatgaaa ggtgttgacc gagagaacgg gatggcaaca
    21961 gtggagatca atgccactga cgacacccct catgaacgcc ctgcccgaca gcatccagac
    22021 cctcgccgag gtcatcggcg aatccgcggc cctcacgctg gtgcgtgcgt ggccgccgac
    22081 cacctccagc accaccggcc gccaccgcgt catcgtctac gttccatcca ccctgcccga
    22141 tcagcaccgc ctgatcgaca tcctcggccg cgacgtcgcc cagcggctgg tcgcgcactt
    22201 cggtggcgag ctgctgttcc tggcgtcctg cttcgccgcc ggggcgcatc agcgccgcga
    22261 acagatcgca catgccgtcg ccagcggcat gccacgcgac cacgtcgcgc gtgaattcgg
    22321 cgtctcgcag accaccatca agcgcgccct gcgtggcgcc cgctccacgc caccgccggc
    22381 ggtacacccg gccctgctga agggatacgc acgcgcatga acgagagcga tctgctggcc
    22441 ggcctgccgg actgggccaa gtacctgggg ggcacctccg gcgtattgat cgcggtctcg
    22501 ctgtggctgc gccaatggct gtcgtcggcc aaggtcgacc gtaccgccga tgaggccacc
    22561 agcaacaccc tgcgcaccct gcaggaacaa ctcgcggccg agcgcacccg tgccgatggg
    22621 ctgatgcacg aacgcgaggc gatggcgcag gagatcgggc aactgcgtgg cgaggtcaac
    22681 gccctgcgcg cgcagatcgc ccagcagagc gtgcagatag acgcgctgct ggcgctggtg
    22741 cgcaagcagc cgggagccgc tgcatgaccg ccgccgccgc cagcgccctc ggcggtacca
    22801 acgtggccgc gttcctcgac atgctggccg tgtccgaagg taccgacatt gccagccagc
    22861 gctcgcgtga ccgcggctac gacgtgatcg tggggggcca gctgttcaac gactaccgcg
    22921 accatccccg cgtcctggtg tcgctgccgc gctatggcat caaatccagc gctgccggcc
    22981 gctaccagtt cctgcgcagt acctgggatg acctgcgcgc acgcctgggc ctgcccgact
    23041 tcggcccggt ctcgcaggat cgcgccgcgg tcgccctgct caagcaatgc ggtgcctacg
    23101 agctggtccg gctgggacga ttcgacgccg ccgtcagcgc ggcacggcgc atctgggcat
    23161 cgctgccggg cgccgggtat gggcagaagg aacacgcact ggaaacgctg cgcgctgcct
    23221 atcgcgccgc aggaggaacc ctggcatgac cccactcgcg ctgaggctgc gcgtcggcct
    23281 gctgctgctc gtcggcagcc atgccggctg cgcctggttg gggtggaccc tgcgggaccg
    23341 cagcgcggac ctggccgttg ccagcgccca ggccgcgcag caggcatccc gcgctgatac
    23401 ggcgctggcc gcacatcagc aggacctcgc caatgcccgg gccggcgccc gggccgaatc
    23461 acagcgcctg gccacgcagg ccgagcgcac ccagcagttc aacgccctgc aacgggacat
    23521 cgacacccat gccaagactc ctggccgcga tcgcggcgac gctgatgctg agttcgtgcg
    23581 catctggcgc gaagccaacg ccggccatgc cctgccacgt tgacctcagc atcgcaccgg
    23641 cacagttgca gacaccccct gagctgccgg acctgcaggg cgccgacgac gatgcgctgc
    23701 tgcgcaacca cgtcgccgtc gcgcgccgat accacgaact cgccgaccag ctgcgggcgc
    23761 tgttgtgcag ccttggcaac cagcgcggtt tcaccatcaa cggtgcgttg ccggtcgcgc
    23821 ctgccagctg cggcactgca gccggcgcca gcaggacctt gccctgaccc cgccgctcgc
    23881 ggtcacgcct gcaatgccgc ccacctccgg tgatggcaac actggctgca gaccgcatgg
    23941 gccgctccgg ccctgccctc cttccattca ctgcatgagc tgacatggcg accgattccc
    24001 cacctccgac gctcgacgcg ctgcacagcg ccatcgaaac cgcgatacgc gcgcacttcc
    24061 cgggccttgc caccgttgcg ttctatcggg aatccagcac ggacaacatg cccatgccgg
    24121 cctgcctgct ggccatgacc cgttgtgatc gcaacaagga aaacagcgac ggcagcggcc
    24181 tgctgcacgc cctgctgcgc ttcgaggcac gcattgtcgt agcggccaat gccgatggag
    24241 cgctgcaggt acgcaatgcc gccgtcgccc tggcaacctg gctgcaccag ctcggccgct
    24301 tccccggggc cgccagcggc gccatcgatg tgatcgccgc gttgcccgaa gacgttgcga
    24361 cggcacagcc tggtctccgc agctgggtgg tcgagtggtc gctgccgatc gccctgggca
    24421 gcaacgcgtg ggaggacacc ggcggcgtgg tgccgcaggc cttctacagc ttcgctcccg
    24481 agatcggccg tgcgcatgag ccacgctacc agccgctgcc ggagcacgcg ccgtgagcgc
    24541 cgaacacgcg cggctgatcg gcaacctgct gatgatcggc gtcgtgcgcg aactcgacga
    24601 agccgcagcg cgcgtacgcg tggacgccga cggcatgctc accgactgga ttccctggct
    24661 ggaacgacgg gccgggccgg gcgcgcgcag ctggtgcgcg cccgagccgg gcgagcaggt
    24721 ggtgctcgcc tgcccctatg gcgatccggg ccaggcgctg gtgctgggca gcctgtacca
    24781 ggaccgcttc gccgcaccgg ctgactcgcg cctgcggcaa cgcaccgagt tcgccgacgg
    24841 cagcagcgtc gattacgacc aggaaacctc cacgctcagc gtcaacgtcg gcagcggcaa
    24901 ggtcatcgtg acctgtgcaa gcgcgcaggt gatcgccagt gaatcggtgc tgctcgatac
    24961 accgtcgatc aaggccaccg gcgacctgga cgtgacaggt gcgatcaccg ccggcaagga
    25021 catcagcacc ccggcggaga tcaaggccgg cgccatcggc ctgaaggcac acaagcacac
    25081 cgcgcagggc cccaccgccc cgaccacgcc ggcccaggcc tgaccggcca cgcctgcaat
    25141 gccctcaaaa cctgcactcc acgacgatag agaccatgcg aggaatcgac gccaacaccg
    25201 gcaaatccct ggatgggctg gcccatctgc accagtccgt gcgtgacatc ctcaccacgc
    25261 cccttggctc ccgcgtactg cgccgcgaat acggctcacg cgtgtttgaa ctgatcgatg
    25321 cgcccaccaa tcgctcgctg cgcatggacc tgattgccgc caccgtcgac gccctggcgc
    25381 gatgggaacc gcggctccac gtcgagaacg tcgacgtctc cctccccgcc cccggcgtga
    25441 tgatcctggc agtcaccggc atccatctac ccgacgggca ggccatcacc atcgaaggaa
    25501 tcgaggttcg ctaaccgtgg catccggctc gttcaccagt gtcaatctgt cccagctgcc
    25561 tgcaccggcg gtcatcgaag tgctcgattt cgaagccatg ttcgatgaat cgctgaccgc
    25621 gctgcaggcc ctggatccca ccttcgacgc gctgctgccg tcggaccctg ctttcaagat
    25681 cctggaggtc tgcacctacc tgcgcctgct cgaccgccag cgcgtcaacg acgccgcgcg
    25741 tggcgtgatg ctggcctacg cggtcggcag tgacctggac catctcgctg cgatcttcgg
    25801 catcgcccgc caggtgctgg acccgggcaa gccgcaggag ggcattccac cgcgctacga
    25861 aggtgatgag gatttccgtc gccgcatcca gctgggcccg gaaggcttca gcgtggccgg
    25921 gccggagggc gcctacatct tccacgccct tagcgccgac gcccgcgtgc tcgacgccag
    25981 cgcgaccagc tcctcacccg gtgtggtggt ggtttcggtg ctgtcgcgcg aagccaatgg
    26041 tgccgcttcc cagggcctgc ttgatgcagt ggaagcaaag ctcagcgcgg ccgacgtgcg
    26101 cccgctgacc gaccacgtgc tggtgcggtc ggcggagatc gtcaactacg cgatcaacgc
    26161 cacgctctac accttcgccg gcccggactc gcaggtggta ctgggcgagg cccgcacgcg
    26221 cctggaccgc tacatcgccg agtcgcatcg cctgggccgc gacgtgaccc gctcgggcct
    26281 gttcgccgcg ttgcatgccg agggtgtgca gcgcgtggag atcgccagcc cattggctga
    26341 tgtagtggta gaccgcaccc aggccactca ctgcagcacg gtgatcctga cccatggcgg
    26401 caacgatgag tgatcccacc acgcgcctga tcaacgcacg cctgcgcggt gcggtcgatg
    26461 gacagaacct tcagttccgt catccgggtg gcgccctggc ttccctgcag tcggtgtacc
    26521 gcaccgactg gcaggggcgc ctgaagttgt cggacacgcc aagacgcaac ctgcagcgct
    26581 tatcggcaac cttcaacgtg ccccgctgga cgggctacta cgtcaagcct gccaatctgt
    26641 ctgccgggtc attcgcgcct gatggcagcc ccaatgcctt ctccttccct gcctccgatg
    26701 cgatcggcgg gccagggcag cgcttcaccg gcctggtgga cgaagatgga agcgcgtttc
    26761 ccgatggcgc cgtccgcacc atcagcgtct ggctgcgcgc aaccgagccg tgcgtcatcg
    26821 gcttcggcat gcgcacgacc ggcccaggca ggacccagct gcaggtgggt accgagtgga
    26881 ggcgttacag ctacacctac accgccactg cggatgaccc accacgcggc atgagcatcg
    26941 tgctggatcg gctggcagcc gggaactctg gcctgaagcc ggacagccgc atccacgtat
    27001 ggggcacaca ggccgaagca ggccctgtgg cgacgagcta catccatgcc gtcgcgcaac
    27061 ccatgacaag gatcgactac agcatggccg gcaacgtagt caccttgaac tacctgcctc
    27121 cccccggcgc gatcattgat ggcgatgcgc tggtcagcgt acctgctgcc gcacatctgt
    27181 tgccccccaa ctccacccgt agcgagcagg ccctggcgcg cgcagcggtc acacgcccgc
    27241 tgccggtgga catcaccgca ctgtgggatg ccgaccgctg cccggccgcg ctgttgccct
    27301 ggctggcctg ggcactgtca gtcgacgaat ggaaggccta ctggcccgac aaggtgaagc
    27361 gtgcacgcgt gcgcgcggca atcgcgatcc agcgccgcaa gggcacgtgg ggcagcgtgc
    27421 gcgacgttgt cgccgcgttc ggtggctcga tcctgatccg cgaatggtgg gagatgcagc
    27481 cgcaaggcgc acctcacacc ttcgaagcgg tgatgaccat cgccaaccag ggcggcgaga
    27541 ccgcaaccgc caagttcgtc gacgacgtga tcggcgagat cacccgcacc aagccggtgc
    27601 gatcgcattt cacgttcacc cagggcatgc aggccagcgc cgagatcggt gcgcttgcag
    27661 gagcccgtgg caccaccttc cgccgcatcc aactgatcgg agagtaaacc ccgcatgcgc
    27721 ttgaaaatca ccgacgccgg cttcgccaag ctggtcaatc cccccaatac cggcaccagc
    27781 gccgtactga tcaccgagat cggcctgacc tccacggcgt tcacgccatc ggcggggctg
    27841 actgcactgc ccggcgaaat caagcgtgtc ctgacgttcg gtggcaaggc cgttggcgat
    27901 gacacactgc acgtcacgat ccgtgacgac agcgccagtg cctacagcct gcgaggcttc
    27961 ggcctgtacc tgggcgacgg cacgctgttc gccacctttg gccaggccga tccgatcatg
    28021 gagaagactg cggcctcgat gctgttgctc tccaccgata cccgcttcag cgaagtcgat
    28081 accgggctga tcgagttcgg caatgccgag ttcatctacc caccggcgac cgccgaggtg
    28141 cagggcgtgg tggagctggc cacctccacc gaggccgagg aaggtgccga cacgcaacgt
    28201 gcggtcaccc cgcgcgggct gcgtgcgttc atcgacaagc gattgggcgc cagcgcaccc
    28261 acgcagttgg tgcggacgct gctgtcgatc gccaccgaag ccgcgttccg ctccgcattg
    28321 gggctgaaat cggctgcgct gaaggatgaa ggcgccgaca agggcctgga tgccgacctg
    28381 cttgacggcc gacacggcac gcactatctg gattggcgca acatgaccgg cgtgccgtcc
    28441 agcgtgcacg tacccggcca ggtgatcctg ttcgccggtg ccaccgcgcc caacggcatg
    28501 ctgctgtgca atggcgccgc tgttccgcgt gccagctacc cggccctgtt cgctgccatc
    28561 ggcacccgct acggcgccgg cgatggcgca accaccttca acctgccggc aatgcaggaa
    28621 ggcacggtcg tcacccacac gctgaatccc gaagcggtcg gcagcttcac ccagggcgag
    28681 gtgatccgcc atgcccatag cgcaagcacg gcaacggcag gcaaccatag ccacgccatt
    28741 tccgtaggtg caggcggcgc tcactcgcat ggcgccagcg ccagcgcggt cggtgaccac
    28801 gcgcacggtg cgtggactga ctcgcagggc catcacgcgc ataccggcgg tacatcctgg
    28861 atcggcgacc accagcatct caccgcgttc gccgaatcgg gtaccaccta tccgtggggc
    28921 gccgactaca acaatcacgt cggctcgcgc ggcaacctgg actacgacaa cccctggccc
    28981 aacaccagcc cggccggtgg acacgcacac agttttacca ccgacggcgc aggcggccat
    29041 ggccacaaca tcggcatgaa cggcgccggc ggccactcgc acaccatctc catcgcccag
    29101 gttggcgacc acggccacac cgcctcggcc gctgacgccg gtgcccacac ccacgccatc
    29161 gtggtggaga cctccggtgg cgaacgcaac ctgccagccg ggctgcggat gatctattgc
    29221 atcgcttact gaggacatga acgtgcccat cgaaccgcgc ttcgcgcact cctacgaccc
    29281 cgacacccgc gcctacatgg gcaaggtccg tctgcagccc tcccccgacg gccgctggaa
    29341 cctgcccgac tacaccgtcg acctggcccc ccgccagccc gccggcgagt accagacgct
    29401 gcgcctggcc gatgatggca cgcgctggga agcggtcgcc gacttccgca actgcatgct
    29461 gtgggacacc cgcacagcaa tggcggtgcc caatcgcctc acgctcggcg agcccctgcc
    29521 caaggacgtg acgctctccg aaccgttccg gctggacggc accacaccgc agtacaacgc
    29581 gtggaacgct gggcgccgcg aatggacgct gctgccggac tacagcgcac gaccgttgtg
    29641 gaacaagagc gatgccagct tcgcgactcc actgccgcgt ggcgtcgggt tgccgcccac
    29701 ggtgaccgat ctggcaccac cggccgatcg cagctacccg atcatctatg acgacgccag
    29761 cgcggcctgg ttgatcgtgg ccgatcccgc aacacccacc ccgcaaccgc aggcgtgaca
    29821 tcaggccacg gctgcaatta atccagccgc ggccagatac gaacatgtac ccatgcggcg
    29881 cagctcgcga ccgcagcacc cacccaacca aggaaaaaac aacgcatggc cgaatttctg
    29941 catggcgtgc aggtcgtcaa catcgatggt ggttcccgct cgatcgctgt tgcttcgacc
    30001 agtgtcatcg gcatcgtggg caccgcgccc cgcgccgaca agaccgcctt cccgtacaac
    30061 accccggtcc tggtgacctc gcgttcgcag gctgccaagc tgctcgccaa cgccgctacc
    30121 gaagtcgatg acggcaccct cccgggccag ctcgacgcca tcttcgacca gtccaacgcg
    30181 gtcgtcgtcg tcatccgcgt ggaaaagggc gcgaccgaga atgacaccct ggccaacgtg
    30241 ctgggcggcg tgaatgctca gaccggtgcc tacaccggcg tgcatgcgct gctggcgtcc
    30301 aagtcggtgg tgggcatcaa gccgcgcatc ctggcggtac cgggcttcac ccacacccat
    30361 gaaaagcgcg acaccgagct gctggccaac ccggtcgtgg ccgagctgct cggcatcgcc
    30421 gacaagctgc gcgcggtgat catcaaggac ggcccgaaca gcaacgatga ggccgccaag
    30481 agcaccaccg ccctgaccgg ttccaagcgc gtctacgtgg tcgacccggc gctgctggtg
    30541 cagtccggtg atgccatcgt cacccgctac gcctccggtg ccgtggccgg cgccatcgcc
    30601 cgcagcgaca acgaacgcgg ctggtgggca tcgccgtcga acctggaact caacggcgtg
    30661 gttggtaccg cgcgtgccat cgacttcggc ctgtccgacg cgaccagccg cgccaacctg
    30721 ctgaaccagt ccaacgtggc gaccatcatc cgcgaaggtg gcttccgcct gtggggcaac
    30781 cgcaccgcca gcagcgacca gaagtggcag ttcctgtgcg tggtgcgcac cgccgacatc
    30841 atcgccgaca gcctcgaggc cgcccatctg tgggctgtcg accgcggcat cagcaagacc
    30901 tacgtcgatg acgtgcgcga gggcgtcaat gccttcctgc gcggcttgaa gacccagggc
    30961 gcgatcctcg gcggcaactg ctggatcgac cccgatctga acgcagcgga cagcgtggcc
    31021 cagggccgtt tctactggga cttcgacttc accccgacct acccgggtga acagctgacc
    31081 ttccgcatgc acatgaacaa caactacgtc tcggagatct tctaagcatg gcgcgcaacg
    31141 tccgcaagaa cttcaacttc tacgtcgatg gcaagggcta tgccggcaac gtggaatcct
    31201 tcaccgctcc gaagctgacg ctgaagaccg aggatttcca ggcgggtggc atgttcgccc
    31261 cgaccgaaat caccctgggc cacgagaagc ttgaagccga ggccgtcctc atcgccgatg
    31321 atccggacat catgggcaag ttccatgttg tggagagcaa ggagtattcc ttcaccgcac
    31381 gcgaggcact cgaatccagc gacggcagca tcaccgccgt ggtccacaac atgcgcggca
    31441 aggtcaaggc catcgatcgt ggcgagtcca agtccggcga gaagggcacg gtgaaaatct
    31501 cgctcgcgct gaactactac aagctcaccc acggaccgct ggtcgtccag gagctggacg
    31561 tggtcaacat gatcgccaag cagaacggcg tggacatgct ggccggcctg cgcagcgccc
    31621 tgggcatctg accccacacg catctccaca gcaccggggg cgcctcgcgc ccccgccttc
    31681 atcgcgctcc ctcgatttcc aggaacacat ccatgtccag caagaccaag accgccaacg
    31741 accacgtcat cgaacgcgat ggctatgccg aagtcaccct cacccgcccg cgccaggtca
    31801 atggcgtgga gaccgccgtg ctgcgcatgc gcgaacccac cgtggaagac atggagcggt
    31861 tccaggatga caagggcagc gatgcacagc gtgaggtccg gatgatcgcc aacctgtgcg
    31921 agatcccgcc ggacgacctg cgcaagctgc cgctgcgcga ctacgcccgc ctgcagtcgg
    31981 gggtcgcgct ttttaccacc tgaccctgcc gcagatcagg cagggagtgc tcgccctggc
    32041 cggccatacc ggctggggcc tgcgcgaaat catgacgctg cgggtgtcga agttcatctg
    32101 gtggatacaa ggattgccgg tacatggcga gtaacgttca aacgacaacg atcacgatcg
    32161 gtggctcgat ctcgggctcg ctgaagtccg cactgtcctc caccgaggat ggactgaaga
    32221 agatcggcag cgaactggac aggctggagc gcaagcagcg ctccatgagc aaggcgaacc
    32281 cctcgctggt gaagctcaag cagaacgttg ccgggctgcg ccaggagtat gccaggctct
    32341 ccagcgaggg cgatcgcctg cgcaaggtgc agaccggcct ggagcgcgtc gagaaggcga
    32401 gcaccgccaa tctgcgtagc cgcaagaagc tgggaacctc cttcaaggag tcacgcaccc
    32461 tgctcggcag cgcagtgacc cagctggcca agccggtcga gaacgcctcc agcttcgccc
    32521 gccagaacca gcagatcggc agcgcagcgg gcctggacaa cggccaggtc aaggcgctgg
    32581 gcaggacaat cctggccgag accggcaaca ccaaccagaa ggcgaatgac ctgcagcgcg
    32641 ccatccggct gctggtcgac gccggcatgg atgcacagtc ggcgcagacc agcctgcgcg
    32701 ccatcggccg caccgccacc gtcaccggca ccgggatcga cgacgtctcc agcgccgccg
    32761 ttggcctgca gcagtcattc gacatcgacc ctgccaacat gcagtcggcg ctggatgtcc
    32821 tggtcgtcag cagccgccag ggcgggctgg ggctgaagga catggccaag gtaatgccgg
    32881 tgctgggaac gtcgttccag gcgctgaagc tgcagggcaa cgccgcagcg gccaccatgg
    32941 gcgcggcact ggaagccacg cgcaggtccg cgggcggcgc tgaccaggca gccacccaga
    33001 tgaagggctt catgacatcg atcatgtcgc ccgagctcca ggccaaggcc aagaagggat
    33061 tcggcctcga cctgcgcaag gtcatcagcg acgcgcagag cagcggtggc aacccgttcg
    33121 acgctgcgat gcaggccatc atccaggcca cggccggcga tcagcagaag atcggcaagc
    33181 tgttcggcga tgcacaggcg aagaacttcg tcggcccgat gatccagaac tgggaccagt
    33241 acacccggat ccgcgacaag gcgctcaatg gctctgccgg aaccaccgat gcggcttacg
    33301 ccaatgccat gcagaccgac ccggagaaga tccagggcgc gaagatcgcc gtggacaacc
    33361 tgtccaaggc ctttggtgcg gcgttgctgc ccgcggtcgg cgacgccgcg gtgaaactga
    33421 ccgaactgct gaacggcgta accaccttcg tgaccgagaa tccgaagctg atcgccaata
    33481 ccaccaaggt ggtggtgggc atgctcgcca tgcgcagcgc ggtactcggt gcccgttacg
    33541 cctggacgtt cgtgaagggt ccgatcctgg ccgtgcagaa ggtcttccag ctgttccgtg
    33601 ccggcaacct gctggcccag ctggggcgct tcggcccgat ggccatgcgt atcgcctcgg
    33661 tgttccgcgt cgtcgccacc gcagtggggg ccattggtgg cggacctatc gcggtagctg
    33721 tggccgcgct cactgccggt gccctgcttg tccgcaagta ctgggagccg atcaaggcct
    33781 tcctcggcgg tgtatgggaa ggtctcagca gtgcgggcac ctccgcgatg ggagaactgg
    33841 tgaatgccgt tgcgccgctg cgtccagcgt gggaagcggt cagcgccctg ctggggcagg
    33901 cctgggactg gctgtcgcgg atgctggccc cggcgcagta caccggaaac gaactctccc
    33961 gcgtgggcga gatcggcaag ctggtgggcg aagcactcat gctcaacttc cgcgccgtca
    34021 tccatgtcgc tggcttcgtc gccgaggtct tcaggatgat cggtgaggtc atcggcaccg
    34081 tggccggatt catcgtcgtc accttcggcg gtgcctggga ctgggttgca gcaaaggtca
    34141 gcagcgtgat cgacacgatg atgaccaaga tggccccctt catgaaggtg gtcggcacca
    34201 tcatggacaa ggtcggtggc atgctgggca ccgccaagga caagatcgcg ttcggtgtga
    34261 acaccgcggc cgatgcctac ggcgcgatac gcgcaaacgg cggcatacag ctgcctccgg
    34321 tgatgctcgc gcccgccagc atgcacagcg ccagcgtgca gccacgcatg ccgaatgcct
    34381 ttggtacacc ggccgggcgt gccgcaccgg agatgccttc gcccacaccg cgcagcgcca
    34441 ccacggtgca gcagcagcag accaacaaca tcaccatcca ccagcagcca ggcgaatcca
    34501 gcgaagcggt ggcgcgccgc acggccgacg agctgcagcg tcgcagcgcg gtgaccgccc
    34561 gtggtggcct ggcagacagg aactgagcat gaaacgcgaa ttcgtaaccg gcgcagtgga
    34621 caagctgctg tcgcagttca aagccaacga ctccggcaac gccccggtcc tgctgatgct
    34681 gggcggcttc aagttcagcc tcaacaccgc ggtcttccgg gagatccagc agtccaacga
    34741 gtatcgctgg caggcgcagg accgcgtcgg ccagatggcg gccctgcagt acaccggacc
    34801 gggctcggcc agcatgaccc tgcctggcgt catctactac cagttccgcg gagccggcaa
    34861 tgagctcgca cagctgcgca ggctggccgc gcagggcacg cctcatcgac tgctgaccgg
    34921 caagggcggc aacctgggcc tgtgggtcat cgagaagatc gatgccaccg ccagcgagtt
    34981 caccgccgac agcgcgatcc tgaaacagga attcaccctt tcactgcgga agcacagcga
    35041 tggcacgaac gtatagcacc cgcgacggcg acgtcgtaga ccgtatcgcg tatgcgcact
    35101 atggcgagca gtcaccagcc atcctgcgcg cggtactcga cgccaacccg ggcctggccg
    35161 cgcgcggcgc agtgctgcct gccggcgtgg cgatcaccct gccggaggtg cagcgcccgg
    35221 ccagcgagcg caagggagtg gccctgtggg attgaacatc gcaccggcct tccgcgtggt
    35281 ggccaacagc caggacatca ccgacaagat catggcgcgc ttcaagtcgc tgcgcatcac
    35341 cgacgagacc ggcaacacgt ccgacacgct ggaactgcag ctggccgacc atgatccgtc
    35401 cgatccgatc cagctgccac cggtgggcgc ggaactggaa gccttcatcg gctatgacgg
    35461 ccaagtgcgg cgcgtgggcc tgtacatctg cgacgaggtg gagatctccg gctttcccgg
    35521 cagcatgacg ctgcgcgccc gggcggcacc gttcgagacc agcaaggggg gcaagagcga
    35581 cctgcagacg cagaagacac gcacctggaa gaagggcacc acgatcggcg acatggtgcg
    35641 gcgcatggcc ggcgaacatg ggctgaacgc agcggtgagc gcatcgctgg cgtccatcgt
    35701 gctgccgctg acggtgcagt cgcaggagtc ggacatgaac ctgctgctgc gcctggccaa
    35761 acagcacgat gccatcgcca agcccggagg cgggcgcctg gtgttcgtga agcggggcga
    35821 atccaccagc gccagcggcg agcgcattcc cgatgtcacc cttaccccgg ccgacggcag
    35881 cgactatcgg gtaacccttg ccgcacgcga agatgccggc accaccattg cctactaccg
    35941 cgatgtgcgc ggtgccaagc gccaggaagt gaaagtgggc agcggtgaac cgatcatgcg
    36001 cctgcgcatg gcctatgccg accgggagag cgcagaggcg gccgcacgcg ccaagcatcg
    36061 cgagcaggca cggcagacgc ggacgctcag ctacaccctg cccggccgcg agacactgat
    36121 ggccgaagcc accgtggtga tgcaggggtt ccgcgagggc gtggatggcc agtggctggt
    36181 caagcgcgcc gagcacagca tcggcagcga aggctacgtc acccgcatcg aatgcgaaca
    36241 acccaacagt gccgacgcgg tgaaggcggc cagcagtgcc gcggccaccg aaggcgagca
    36301 ggtagccagc gaagtgtaga tccacgccat gcgtggatgc tttttgcaca tcaactcacg
    36361 tactgcgcca ccccattgcc aaacgaccag ttctccttct tcacttccac caggttgatg
    36421 aacacatcct cgcgacggat acccaccgcc gcgtgcaggc cctcggcgat gcccgcatac
    36481 agcgccttct tctgctccag cgtgcgccct tcgttccagg tgatctggat gcagatgaag
    36541 tcgtcggtgc ggtccacgcc caggtagccc gggtcgtaga tcagcgtccc ggcgtcgtgc
    36601 tgctggaaga tctggaagcg atcgttttcc ggcacgtcca ccgcgcgcat ggcctggtag
    36661 atggcttcac ccacgcgttg caggtagtcg gcggatttac ctttgcgaag atcaatgcgg
    36721 gcgagcggca tggcggggct ccagagacgc ggcaaagtgt ccctgccgat gggagcacgc
    36781 tgcagggcac tcggcaaggg ctgcgcggct gtcgcgttaa gccaggggtg agcaggccaa
    36841 tgtgactggc cacccgcgcg ccagtgatcg gcgccacatc cgggccgtgc caggcatcac
    36901 gccccgaccc acggccgggg tattcctacc ctccccctcc tgtgggcagg cgcatcaagg
    36961 gtcgccggca ccttctgccg gtgacctgtc caacccaagg agaaccggat gaaactgacg
    37021 ccactggccc tggccgcgac gctgtgcgcg ttcaccgcac acgcgcagca ggacgatgac
    37081 tgccccagcg acgcgcaaat gatcgccacc atgtccttca ccgagcttga tcggtacgaa
    37141 gcggacatgc gcaatgaaga gccctcgttc gaggagctct gcaaggatgc caccgacaag
    37201 gacgaggagg aggcggcagg gtcgcggcgg cactactgtg tcaagcgcac cgcgcgctac
    37261 gtgtcctaca acaccgacat cggcgcagag gaatattcgg atgtcacgat gtacgactac
    37321 gtctaccttc cacgcacagg caccacgtgg acgcatcgtg tgcgcgtggt gatccaggat
    37381 gtgctgggcg aggcatccaa ggggctgacc gtggccccct tcctgtactg cggcagctgt
    37441 accgaaaagc agcagttcca gatgatcggg ctcggaggac agggtacgta cgacttcgcc
    37501 gtgacgctgg gcatggacac cgaagacggc cgcaccagcc agaacaccca gcaggatcct
    37561 ggatggcgaa gcgttctggg tatccatcaa ggaatgacgt catgacgcac gaagaatgga
    37621 acgaactgct cggcgagatc aaccgagcct gcctcgcagc catcccacac gacagcgatc
    37681 catcaccgtt tgggtttgga ctgagcccgc gggtcgatcg atatccccag catccgatat
    37741 cccgtctcgc cactgatgca atggcacgca aatccgactg gctcggcctg ccacctgcaa
    37801 cacccgctca gattgaacgg gcagaacatc gattgggcat ccaactccct atcgagtatc
    37861 ggcgctttct tgaagtgtcc aatggtttcc tgctgccggg cagcgccatt tcttcctatc
    37921 ttccgatcga gctggtgcag ccgctcagcg tgaactatcc ggacgtggcc gcattctgga
    37981 aaacgatgat ggacggtctg gagaatgaag tccccgatct gctggaaggc cgccttgaga
    38041 gcaccctgca gatctccgga ccgcccaacg acagatcgga cttcatcctg ctggatgacc
    38101 gcgccgagaa cgaagccgcc gagctgcaga tgttcaggct cgggcatgtc gggccatcgg
    38161 ggccctttgc gatggatacg gcgatgagaa acgcattggc ctacctgcaa tggcatacat
    38221 gaagatcgga ttcagccgat tcatgtcggg aacgtgaccg gatcgcgcgc cgcgaaccct
    38281 gctcctgccc ctggagaatc atttcatgaa cgtacccacg aaccatcccg atgtgcctgc
    38341 cagcgcggac gactggctcc ccctacttgc tcgcctcaat caaggagtcc tggcgacact
    38401 ggaagaacgg cttgctgaaa ctcacctcga catgggcatg cgaccgttcg ccgagcagta
    38461 cccgaacagc cctctggcag acgtcgctcg acgcgcgctg actggaaccc tcgattggtg
    38521 tggcgtgccc ggcgccagtg aacaggccat tgttgatgct gaaaagcgcc ttggcgtcag
    38581 attgcccaag agctatcgcg atttcctgaa ggtcagcaat ggctttgcga tgccaggacg
    38641 cttcatcgac atcctgctgc ccgtcgagtt gatccgtccg ttcgggcagg gcaacgaaga
    38701 gatcgtgcag atccgccggg agctggttgt ggacccggtg gaggaggcgt tccagtacca
    38761 cctggaccgt gccatacagg taagcggcac gccgcagatg ggcgatgact tcatcctgct
    38821 cgacacccat cgctccacag caccgaatga atgcgatgcg catatctaca gccgtgtcga
    38881 tattgattgg tacgcctcgt ttgcacacct gatggcggag agagcaacgt tcaatctgtg
    38941 agccgactgc accctccttc gggagggtga accatcgcgc gttgacgctt ttgcctcttc
    39001 ctgaccagca agtctcgtcg cgtatgcagc tcgacactgc ccggcttgtc ccagcgcaca
    39061 cttggtggcg gcactagcgc acagaactgg aaatacctgt gtcttcgccg cttcaatgca
    39121 actttcctta ctgacgtgtc cgtcaaggca gttcaatgat gaccccgcca aggcaacacg
    39181 ccttggtcgg gattggcgtc tcgaataaac gaatgaactt ccatcgctgc gattcacgcc
    39241 gcagcagaga gaatgcaccg actgccttca atggcggccg gtgcgtgggg atcgacagat
    39301 ccgccaggcc ttcttctcga tggaagttcg tttgccttgg tacgccaacc cgcaccgtcc
    39361 gccaccttct ttccgaaggt ggccttacgc cagtgagggt ttcgccatga ccaaacgagc
    39421 cgcatcgctt ccgcgcctgt acgcattgat tgccgacatc gccaaccagg ttcccgacga
    39481 catcgcacgc gagatcgaat gcgcgctgga cgaacagaac ctgcccgtgc agtcacccgc
    39541 gtttttcgcg tgcctcaatg ccatcaataa cgccgagggc gaggacgggc aaccgtgcag
    39601 cagcctcacc cttgccgccg cccatcacgc gtcgctgcgc cgctcgatgg caggactcag
    39661 cgcagtgctc gatctgctgc aggccgccga ccgcgcgcgt agcgaggccg gcccggatga
    39721 acagctgggc gccttccaca ccgacgggtt gatcgtggcc gcacggcaac tggtgcgcga
    39781 agccaaccat tgcctggaag gtggaaccgc ctgagcgcct gggcgcgacg tggctacaat
    39841 cgcgcaggga atcgcaggag accgcaatgg acgccgaaca cctggagtac ttcaaggccg
    39901 ccctggaagg ccgcgcaacg gtcggctgga atgtctggtt tgccgccaac cagcaggcgc
    39961 tcgcccagca ggtgagccgc cctgccctgc tgcggttgaa gttcaatcac ctgcatgaag
    40021 ccgagcgcct gctggccgaa gccggcgtcg ttccggccag cacggcgggc aagcgctatg
    40081 aggtgtactg cgcgcagttg tcagcagacg tggtggacga gaacggtcgt ccgttgcctg
    40141 cggtgtggcg tgcagcgcac ggcggtgcca tcggcctgct tgccgatggc gaacacgaag
    40201 cgggccgggc aaagctgctt gcggagttca gccgcgcgcg caagcgcggg ctgcagcagg
    40261 cgcatgaatg gttgagcgat gtgtgcttcg aaggcgagat ggagctgagc ggcggcaatg
    40321 ccgtagtggg ccgcagcctg ctggcggtgg tggtgcaggc cggcagcggc cacgacctgt
    40381 tggatggcgt ggcgatgatg gcccgcgaac ggctggagga tccgggctga gacggagccc
    40441 gcttcggcgg gcgccacgga accccaggca acaaaaaagc ccccattgct ggaggccttt
    40501 ttcgttctgc aacatggtgg gcggtacagg gatcgaacct gtgacccttg ccgtgtgaag
    40561 gcaatgctct accgctgagc taaccgcccg gtgtgttgct gagccgctca ttataggggc
    40621 ttttcagagg ccgtcaacca tttttcacat tcgtgttcac gggcgttttc cggggccgca
    40681 gtcgagcatg gctcgactct acagaaccgc ccagcggcgc ctcacatcgt atgggtcggc
    40741 ttgtccgagc tggtcaggcc ggccagcatc gtctcgatct tgtggcgcac gccctcgcct
    40801 tcagcgccat cggccagctg cacgccgatg ccggcggtgc ggttgccctg cgcgccggcc
    40861 ggggtcaccc agatcacctt gccggccacc ggcaggcgct cgctggaatc gggcagggtc
    40921 agcagcagga acacctcgtc gcccaggaag tagcgcttgg gcgtgggcac gaagatgccg
    40981 ccgttcttca cgaacggcat gtacgcgctg tacagcgcgg ctttgtcctt cacggccagg
    41041 gacaggatgc cctggcgggc gttgctggca ctcatcgatt tccccttgcg gcaggccgct
    41101 cgttcacctt gttccaggcc agcagcaact cgaccaccgc aaggtctgca cgcaccgtgg
    41161 tgcgcagcag gtcgcgggtg cggttggccg catcgaacca ggctgcaagc ttgtgcaatc
    41221 gctccggcgt ggtcaaggca tcggtgctgg cctgggccag tgccaggtcg gcagcgaagc
    41281 gcaggcgcag cgccgcgttg tcatcaccgc accacttctg cgccagctcc accgcgccgg
    41341 tcttgccggc ggccagctgc tccagctcgc ggcccacttc gcggcgcagg ctcaggccat
    41401 cttcgcgcag ccagttgtcg gcctggccgg gatggccgcg cgcggcatcc agcgcttcgc
    41461 gcgccgatgc ttcgctgtgg ccctgctgct gcagccaggc cagtgcttca tcacggggcg
    41521 gcagcttgaa ctccagccgc tggcagcggc tgcgcacggt ctgcggcagg cgtgccgggt
    41581 cgctgctgat cagccacagg tagcgcccgg gctgcggctc ttccagcgtc ttcagcagcg
    41641 cattggccgc cgagcggttg atcgcatcgg ccgggtcgac gatcaccacc tgcgccacgc
    41701 cgtactgcgg ggtcagcgcc agcttgttgg tgatctcgcg tacctgctcg atgacgatct
    41761 cggtacgcag cttgtcgccg ctcttgttcg gaatgaagct gacccgttgc agatccggat
    41821 gcgtgccggc cgcgatcagc tggcgcgtgc gcgtggcatg tgcagcgtcg ccacgtgcca
    41881 gcacatggtc ggccagcgcc aacgccacct catgcttgcc cagcccggcc gggccgcaga
    41941 tcagcaggcc gtggccgagg cgatcggcat cgagcgcagc cacggtctgc tcgaacgcgc
    42001 gctgctgcca tggcgagaac gtgctcatgc gccctccccg tcctgcagcc agcgctcgac
    42061 acgcgcaacc acatcagcgg cgacgcgttc ctgcacctgg ccggcatcga tcagcgcgaa
    42121 acgctgaggg tcctgctgcg cgcggctgcg gaacacggcg cgcacacgct ggaagaaatc
    42181 atcctgttcg ctctcgatgc ggtccggcca caggtcgcgg ccgttggcgc gcgcacggcc
    42241 taccgccaca tccacgtcca gcagcagggt caggccgggc aacaggccga ccgcgcggcg
    42301 ttccaggtcg gcaatccact gcggatcaag cccgcggcca ccgccctggt aggcgtagct
    42361 ggaatcggtg aagcggtcgc tcagcacata ggcgccgcgc tgcagcgccg gctggatcac
    42421 ctggcgcaca tgctgcgcac gcgcggcgaa caccagcagc agctcggcct cggcactgag
    42481 cggctcggcg gcgatttcgg catcgggctt cagcaccagg ccgcggatgc gctcggccag
    42541 cggcgtaccg cccggctcgc gggtcagcac gacctcgtgg ccgtggctgc gcaggcagtc
    42601 acggatggca ttgatggcgg tggtcttgcc cgcaccctcg ccgccttcca ggctgacgaa
    42661 acgcgggtgg cgaagcagcg cgggactcat tgcgccgggg tctcctgggt acgttgccgg
    42721 cgcagctgct gcaggtagcg agctactgcg gcgttgtgct ggtccaggct ggacgagaac
    42781 acgtgcgcgc cactgccatc gccaacagcc acgaaataca gcgcgtcgcc cgacagcggc
    42841 tgcgcagccg ccatcagcgc atcgcggctg ggcatggcga tcggggtcgg ggtcaggccg
    42901 gcacgggtat aggtgttgta gggcgtatcg gtggtcaggt cgcgacggcg gatgttgccg
    42961 tcgtacgcgg cgccgatgcc atagatcacg gtcgggtcgg tctgcaggcg catgccgatc
    43021 ttcaggcggc gcatgaacac gccggcaatc tgcgggcgct cgctggccag cgcggtttcc
    43081 ttctcgatga tcgaggccat cgtcagcagt tcgtacggcg tgttgatcgg caggtccggc
    43141 gcgcggcttt cccacgcctc gtccagcgcc ttttccatcg cgacatgggc acgcttgagt
    43201 acgtccagat cgctgtcgcc acgctggtag acgtaggtct ccggcaggaa gcggccttcc
    43261 ggatgctggc caccgaaacc gagacgctgc atcagggccg cgtcatcaag cgtgtcggtg
    43321 gtgtgcagca gcggctcggc gcgcttcagc gcggcacgca gctggcggat gttccagccc
    43381 tcgacgatcg tgacgcggtg ctgcagcacc ttgccggcgc gcatgcgcag cagcagttcg
    43441 cgcggggtca ggtcggtgct gagcgcgtat tcgcccacct tcagtttgcc ggcggcatcg
    43501 agctggcgcg ccagcagctg ccactgcgca tcctggcctt catccacgcc ggcctcgcgc
    43561 agtttgcgca gcacgctgtt catgccatcg ccgctggcga tgaccacgct ctcggcggtc
    43621 ggggtgatcc gcgcgtcggc gaactgggtc tgctggtaga agaaccacgc gcccgcaccg
    43681 gccacgacgg cggccagcac caccaccagc gttaccacga acagacaccc gcgcttggct
    43741 cccgccatgg actacctctg aactcgattc cgtcgtgcag gataccgtgc cggtggattg
    43801 gggtcatgac cgggg
//
LOCUS       DAOKIP010000012        43703 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.012,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000012 DAOKIP010000000
VERSION     DAOKIP010000012.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 43703)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 43703)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..43703
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.012"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..344)
                     /locus_tag="QEL58_000610"
     CDS             complement(<1..344)
                     /locus_tag="QEL58_000610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3301 domain-containing protein"
                     /protein_id="HDS1675129.1"
                     /translation="MPTLLLLLIAGGIIYFFWNAARSAAERAVELGRNACRAADVQWL
                     DQAVHATGLRLSRGEDGRLGFERTFKFEYSYDGIDRHVGRMVLRGDQLISFTGPGAAR
                     ISQIRPDVDDAE"
     gene            complement(412..1413)
                     /locus_tag="QEL58_000611"
     CDS             complement(412..1413)
                     /locus_tag="QEL58_000611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005412807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2272 domain-containing protein"
                     /protein_id="HDS1675130.1"
                     /translation="MRRMLLPACLLLATAPFSAAAAEACDVPPRYGLSPLAVAIRNTA
                     CNEHRLWFRPFIDRDGRAASLSVTEAESEHLADNGLIAWQRVAGYWRDSGTLNAMGSI
                     AGASSCLAPLGTRYTDSDCRAFLVDNPWSAAFISWVMVRAGVPGFNTSPRHIDYIRAA
                     YQGGPSGVPYRLVDPATAKPAPGDLLCFLRDRSTTLSYSGLVQALGNGSVGHWKSHCE
                     VVVAANLGGDQTLYLVGGNVMNTVAMRLLPLDRTGLIQLPPARERSSTGIDPSCTPGR
                     EDECSFNRQDWAALLQLTATSPLVMPSPTATPMQTAPAPQPAIVPAQPVSSEPQPRR"
     gene            complement(1518..2369)
                     /gene="nadC"
                     /locus_tag="QEL58_000612"
     CDS             complement(1518..2369)
                     /gene="nadC"
                     /locus_tag="QEL58_000612"
                     /EC_number="2.4.2.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005415952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxylating nicotinate-nucleotide
                     diphosphorylase"
                     /protein_id="HDS1675131.1"
                     /translation="MSTLPTPDAAVVAADVARALAEDLGSGDVTAALLPDQADSAYLL
                     CKQDGVIAGRPWFDATHRALDPDVRIEWQVSEGDAVTAGTVLALLYGRSRSLVSAERT
                     SLNFLQTLSGTATTTARYVAAVAGTGTRILDTRKTLPGLRLAQKYAVRCGGGDNHRFG
                     LYDTVMLKENHIRAAGSLAAAVAGARRQWPALPLVVEVEDLAQLRQALEAGCERILLD
                     DFSPDLRREAVRITAGRIPLEVSGSVGLGGLRSIAEDGVDCISVGGLTKHVQAIDLSL
                     KLGPPPA"
     gene            complement(2366..2635)
                     /locus_tag="QEL58_000613"
     CDS             complement(2366..2635)
                     /locus_tag="QEL58_000613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005415953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Trm112 family protein"
                     /protein_id="HDS1675132.1"
                     /translation="MDRKLLDLLVSPDTRQPLSLLDGKGLEALNKAISAGAVNKADGN
                     PLAQPLREALVTRDRKQVFRVDDGIPVLLAEEAIPTAQIADFPAA"
     gene            2694..3197
                     /gene="purE"
                     /locus_tag="QEL58_000614"
     CDS             2694..3197
                     /gene="purE"
                     /locus_tag="QEL58_000614"
                     /EC_number="4.1.1.21"
                     /EC_number="5.4.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008570985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide mutase"
                     /protein_id="HDS1675133.1"
                     /translation="MTPNPIAPLVGIVMGSRSDWETMQHAAQKLEALGVPFEVKVVSA
                     HRTPDVLFSYAEQAGPRGLRAIIAGAGGAAHLPGMIAAKTAVPVLGVPVQSKALNGMD
                     SLLSIVQMPAGIPVATFAIGNAGASNAALFAAAMLASDQPAIGQALDAFRARQTEDVM
                     AHDDPRQ"
     gene            3194..4342
                     /locus_tag="QEL58_000615"
     CDS             3194..4342
                     /locus_tag="QEL58_000615"
                     /EC_number="6.3.4.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014646587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide
                     synthase"
                     /protein_id="HDS1675134.1"
                     /translation="MSLTVGILGGGQLARMMVLAGAPLGLRFELYDPAADACSGPLAP
                     LTVGAFDDRQALADFAAKVDVVTFDFENVPADSAQFLADRVPVYPPPAALAVAQDRLS
                     EKTLFQQLGIPLPAFADIRSRDELAEKAAAFGLPCILKTRRLGYDGKGQFRLRSEADI
                     DAAWDALGAQVERTGLILEGFVAFQREVSVVAVRGRDGSFEAWPVTGNWHVDGVLSAS
                     VAPAVLSDAERQAAIGYARRVAEHLQYVGVFALELFCRDGELLANEMAPRVHNSGHWT
                     IEGSETSQFENHLRAVLGLPLGSTRMLGHACMLNWLGAMPDPAPVLAQASGHWHDYGK
                     EPREGRKVGHATLRDDDAAALADALDQVGLELGRPSQVAPAAHALRNR"
     gene            4469..4810
                     /locus_tag="QEL58_000616"
     CDS             4469..4810
                     /locus_tag="QEL58_000616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HDS1675135.1"
                     /translation="MLDWNAYRKELKGRIGEIGKLSPDTVKGYATLSNAGAQTNHLDA
                     KTRELIALAVAVTTRCDGCITVHVDAALKHGANREEIAEALGVAVSLNAGAALVYSAR
                     VMDAVAAHESA"
     gene            complement(4878..5456)
                     /locus_tag="QEL58_000617"
     CDS             complement(4878..5456)
                     /locus_tag="QEL58_000617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016357051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase"
                     /protein_id="HDS1675136.1"
                     /translation="MPVELPALPYLSGSLQPHLSAQTLELHHGRHHRAYVDAVNAGIL
                     GTEWEEASLEEIVRHAQGKLFDAAAQAWNHGFYWQCLRPRGGGEPQGRLGELVKRQFG
                     DAQRLREEFNRTALGLFGSGWVWLVQHPGGQLGIQATRNAGTPLTGDSTPLLCCDVWE
                     HAYYTDYQNDRGRYLDAFWQMVNWEFAESQLR"
     gene            5578..5898
                     /gene="grxD"
                     /locus_tag="QEL58_000618"
     CDS             5578..5898
                     /gene="grxD"
                     /locus_tag="QEL58_000618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004152129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Grx4 family monothiol glutaredoxin"
                     /protein_id="HDS1675137.1"
                     /translation="MAVMQQIQAEVDRYPLVLFMKGTPQYPMCGFSSRAVQALMAAGA
                     VALRTVNVLEEPEIRANLPRFSNLPTFPQLFINGELIGGCDIVLELFESGELKRIVEE
                     ATQG"
     gene            5895..6671
                     /locus_tag="QEL58_000619"
     CDS             5895..6671
                     /locus_tag="QEL58_000619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019337157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HDS1675138.1"
                     /translation="MSAWPSTSPTDGALDGRPLQDRVVLVAGAGGGLGSAAAVAAAAA
                     GATVVLLGRKPRRLDRVYAQVQAVGAEPLLYPLDLEGAGPDDYAELAQALQRELGRLD
                     GLLVCAAHFPGLTPFELADPASFARAVHVTLTAPAWLAQACLPLLRQREDAALVFAVD
                     APERVGQAYWGGYGVAQHGLRGLITSLHDELGRSPVRVSGLYPGPLRTALRARAYSVD
                     QDPAAQGPEAAAAAAVTLLSRAGHAWRGRILDASGAFPGE"
     gene            6904..10158
                     /locus_tag="QEL58_000620"
     CDS             6904..10158
                     /locus_tag="QEL58_000620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004152132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDS1675139.1"
                     /translation="MTHPLRMSKLTLGLVAALAAAPAFAQSTSAGVGGQVMSAAGQPV
                     AGAEVTITHTESGTVSRATTDASGRYNARGLRVGGPYTITITKPGAGTKTEEGVYLNL
                     NQVNTVNANLGGDLAATNLDAVNVVAAAVGSDLFSAYKMGTGTNVNRETLESLPSVNR
                     NIQDYIRLDPRISQVSKADGAISVGGQNTRYNAIRIDGIGAGDPFGLESNNLPTERQP
                     VSMDAIQEINIDIANYDTTIAGGTGAVINAVTKSGTNNFGGTVYYAYRDKDMVRKELD
                     GVRFNGFDDEKTYGMTFGGPIVKDKLFFFANYEKMERSAPGVSLTDSPYGKGTITDAD
                     IARAQQIATGYGFDAGSLNPPANKTEVEEYALKIDWNINENHRAAVRYNKLEQNVVRF
                     PQISNSAISLSTFWYQQPKTYESWMGELFSDWSENFSTEFKISHKEYTSVRTTPSSLP
                     QIQVRGFGASGNDSLYFGTEQNSHVNAVESKELSAFGAANWYIGDHTVKFGFDYSKND
                     LMNYYGRNVNGAYVFNNLADFAAGRVNQYVVRAPRAGGSYDDIPANYTLKNTGLFIQD
                     SWAVNSNLTVQGGVRIDMPDFSNQRLYNPRIMELYGYDNTKLPDKKLVQPRFGFNYTF
                     DSDRPTQLRGGVGLFGGAAPNVWLAGAYQNTGLNYTEYTVRNQTGIFTPNTNPPYIPA
                     AGAGARQNVDIAAPDLKLPSVWKSNLAFDHELPWYGIVASAEFLYTKVKSGIYFERLD
                     LYKNAGGPSYTRIGQDGRELYWNPQGYVPCAGTNCSIREGATAVGGGTVGGKANRPDD
                     IGDVLLMRNTDKGSSRQFTVGLNKPLTENWGWSLAYTYTAAKEVSPLTSSQNTSNWGS
                     TLIGTANENVAYDSRYAIKDRVTGSINWKKAFFGNYNTTVGLFYEGRSGRPFSYIYYN
                     DMNGDAAATTGAGYFNDLFYVPNGPGDVKFTGGATMEKAFFDWLAANPQLAKYQGQIA
                     PANAFRTKWVNSFDLHIAQEFPGFVKEHKGELALDIMNVGNLLNKKWGRIEDYGFNST
                     ARVASYAGIDPATGKYIYNFTGSTDTPTIQENNNDKGNTGVSRWSMQLTLKYKF"
     gene            10411..11799
                     /locus_tag="QEL58_000621"
     CDS             10411..11799
                     /locus_tag="QEL58_000621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014036604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LOG family protein"
                     /protein_id="HDS1675140.1"
                     /translation="MTTNEKAARALPVQDARIYPRGGLDVLSRAEVARLRDASAGGMH
                     ELLRRCALAVLTSGSASDDPRAARDLYPDFDIQVAQQDRGVRIDLVNAPAMAFVDGEI
                     IRGVAELLFAVVRDLAYMAIEMGPAYAAELESSEGITNAVFGLLRNARILNPGDPNLV
                     VCWGGHSISRDEYLYTKQVGYELGLRGLDICTGCGPGAMKGPMKGATIAHAKQRRTVT
                     RYIGLTEPGIIAAESPNPIVNHLVIMPDIEKRLEAFVRIGHGIIVFAGGVGTAEEILY
                     LLGILLREENKDLPFPLILTGPTVAAPYFEQIDRFIRLTLGDEAAERYEIIIGDPVAV
                     AKKMANGIKRVREHRLAQKDSFFFNWSIEIPWEYQQPFVPTHEAMAALDLHHGRAPHA
                     LAADLRRAFSGIVAGNVKEDGMRRIEQFGPFQIHGDTDMMQALDALLRAFVEQRRMKI
                     SGEYQPCYQVLA"
     gene            11961..12476
                     /locus_tag="QEL58_000622"
     CDS             11961..12476
                     /locus_tag="QEL58_000622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GspH/FimT family pseudopilin"
                     /protein_id="HDS1675141.1"
                     /translation="MSLRRESGFTLIELMVTIAVVAILAAIAFPSFQGTLRSSRVTSG
                     NNEILGLLSLARSEAIRSNRGGGVCGSSDGASCDGSWSGGMLAFADTNGDGEMSSGET
                     VLRFVNGSPKLTVSGPSEVIAFDGRGRRRASADQQILLEPDVCSKDALHKRTLTVNAS
                     GQIRSTKEACP"
     gene            12473..12946
                     /gene="pilV"
                     /locus_tag="QEL58_000623"
     CDS             12473..12946
                     /gene="pilV"
                     /locus_tag="QEL58_000623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008267795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus modification protein PilV"
                     /protein_id="HDS1675142.1"
                     /translation="MKSRSVRARQAGGFTLLEVLIAIIVLAFGLLGFALLQTMNVRFV
                     QSANYRTQATNLAYDLTEQMRSNRYQAAWYTTASFAAGSKTAEKACSADTGDVAISAK
                     VARWQCQVVKALGDDAGAEVTYNGGNVRVAVSWGDQRWDPDDPDKATTFALDTEL"
     gene            12949..14109
                     /locus_tag="QEL58_000624"
     CDS             12949..14109
                     /locus_tag="QEL58_000624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilW family protein"
                     /protein_id="HDS1675143.1"
                     /translation="MVMNRRAAMAGLSLVELMVALVISLVLMLGVVQVFIASQTASRL
                     SEGASRVQENARFALDFLERDIRMAGHMGCVNDQAHVVKNQGDPVSHLGATSGDGSPL
                     DFSVSIQGFDAPETTPGGSLTLGADWSAPTGLPIAIEGLIPAPAGGSDVLVLRFFAPE
                     GVPVTAISTDGGNALLDMDSTRVARLTGGGVGDPTLFGIADCGHADVFAGTLSAARVT
                     AASLDLSRYAAQPTGQTMLYRAESMVYYVGINPETKQPGLRRARADSDGAYSINEELV
                     EGIESLQLMYGLDNTANISLDTPPAGNITQFAAADGVSTDADAAGAAQWLRVGQVQVG
                     LLARSPSPSSSTRSANALSVLGVGFANGDKSDGHYRSSYEVSIALRNRLFGN"
     gene            14112..14630
                     /locus_tag="QEL58_000625"
     CDS             14112..14630
                     /locus_tag="QEL58_000625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein"
                     /protein_id="HDS1675144.1"
                     /translation="MTPFPRSFRPVVAPAQQRGAVLYVALVMLILLALLGIAGMQVAG
                     MQEKMAANYRAANRAFQNSEGVVRAAERSVEQITNRESVSEGSLLQAGDVSRVCDDGF
                     DPAGWAEDRRDETAPAVNVRQIDSCVVGESSLDMGRPLDDTTPIYQITGFATDDADSS
                     SSSVVIDTVFKL"
     gene            14642..18391
                     /locus_tag="QEL58_000626"
     CDS             14642..18391
                     /locus_tag="QEL58_000626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein"
                     /protein_id="HDS1675145.1"
                     /translation="MASRKFRFMAAGGAALALGGGYFIYSLMAAQAQGTLAQAPLNIQ
                     VQTPPAFLMALDDSGSMLWETLNNTRDGAYRWDGSSFYNKGTANGFDGSGQRYLYVFP
                     SYGRDSNVAIPPLDNFGFARSPDVNSSYYDPRESYPGWKTGLSAPATSNYLEIKAASA
                     PLDPRPAGAPAKIGGALNLTADSLLTSMQTGGRDSGSWRFRFRSGMKLPVGTRIERGR
                     CSLSGGAVQGEGTFDRVTRETSINSSSCDAAVAFYPATFFLENPATLPADYGYTATPV
                     AIASSPGGRPGTLYKYEIKLANFGNNQAKYDNAMQSFANWFSLYRTRREALIGAATNA
                     LYDTTNLRVGWFRINGRRPVTMFDMTTESQRAKLLSEITSEMRADDSTPNRSAADYLG
                     KQFQRTDEGAPVLLACQKNAGMLFTDGYINEDGNTTLMKDLVAPYYKGPLVPSLDNGS
                     VPVPAECKGSSPDASLDCNKQLHMNFYGVTLGTQGKEFGVKYLPDPERPWVLSPDPYV
                     TKPNFPTTTQNLKPEAVDELWNAVYDSHGEMVNATRPGEITAAMRRIISNVAQGATPS
                     GSRSLTGARIGVGSLSVEPFYEATNNGTDWYGKLHAFKLKVDATTRAIVSEEAWEAAA
                     QMPAAASRRIRFWRDGALVDFTGGNVSLANLCDKSGVMYPGILICSASELTGLATDST
                     TAVAYLRGDVSHEKRNGGKLRDRSTVLGDIITSTPALSSPLDDYGFRRLPGSMGTSYA
                     DYMVTKRNDHRYMVYAAANDGMLHAFDGGMGADGEMDGEGGKELFAYIPSTSLGHMGN
                     LLLPNDPTNQNVQRFQHRYYVDGPVTVSDTYGSNGWTTSLVGTAGAGGRSVFALDVSD
                     PAQFGGSGSLLWEISDLNAALDEEVRANIGHVLGKPVIVPMKNADGSVGFRAIFGNGY
                     ESRSGKAVLFVVDMLASSTPTIRMIEAVESGQNLPAGNNGLGNIVVVDRWGGTSQNDR
                     VRDGLADTVYAADKRGAIWKFDLRDDAAPTAPLFTTDTHVDRSDQRTYRQPITGGMTV
                     TTGASGGVMLIFGTGSFSYYGDENDAAVQALYGINDTEVGQPGTTLTSANLRPFTAQF
                     DDGMRTLSPGTAPAQSRGWTVTLSGKERAVGNPRIVSGVVFMPTYIPSESQGCSVDGA
                     NWVFGLQASSGEAAMSQVRFGAPDGASPGAGTAGVPLSTGGNAPVRDVTTSVVPRLAP
                     PDPGKPGSPPPKPPGNACMMQISVAGAEPMYLPYPCGRQSWRQIQ"
     gene            18445..18852
                     /locus_tag="QEL58_000627"
     CDS             18445..18852
                     /locus_tag="QEL58_000627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011347919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HDS1675146.1"
                     /translation="MAGRLARGFSLIELMIVVAVVAILAAIAYPNYSAHVLKSRRAQA
                     KADLVEYAQLAERYHTINNTYVGFTFPGGAESINSPREGGTAAYTLSMETGQSTFTFT
                     AAAANAQTKDKCGDLTLNQANVKTSQATLSDCW"
     gene            18932..19008
                     /locus_tag="QEL58_000628"
     tRNA            18932..19008
                     /locus_tag="QEL58_000628"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:18966..18968,aa:Asn,seq:gtt)
     gene            complement(19057..19551)
                     /locus_tag="QEL58_000629"
     CDS             complement(19057..19551)
                     /locus_tag="QEL58_000629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008264719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GspH/FimT family protein"
                     /protein_id="HDS1675147.1"
                     /translation="MHLLELLVVVAVLAVLLAAGWPALRELMLHQRSESTRLSLQSGL
                     ATARYQAIMRSALIGLCASPDGHHCGDDWSQGWIVYRTNGRREPPSSIDSILLHQSGL
                     SSVRISAASSSGRPQIYFQPDGRSPGANLTLRICADDRERARVIVSNSGRIRSTRSQD
                     GPPC"
     gene            19722..21746
                     /gene="uvrB"
                     /locus_tag="QEL58_000630"
     CDS             19722..21746
                     /gene="uvrB"
                     /locus_tag="QEL58_000630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011051720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrB"
                     /protein_id="HDS1675148.1"
                     /translation="MSDRFELVSPYSPAGDQPDAIAKLTSNFEAGIAKQTLLGVTGSG
                     KTYTIANVIQNVQKPTLIMAPNKTLAAQLYGEFKAFFPHNAVEYFVSYYDYYQPEAYV
                     PSSDTFIEKDSSINEHIEQMRLAATKTLLSRPDAIVVATVSAIYGLGAPEDYLSLRLI
                     LSKGERIDQRDLINHLTQLQYTRNEYELQRGTFRVRGEVIDVFPAESDSEALRLELFD
                     GEVEKITLFDPLTGETLRNMQRFTVYPKTHYATTRERVLAAVDTIKVELKERLEQLYA
                     ENKLVEAQRLAQRTQFDIEMMAEVGFCNGIENYSRHLTGKNAGEPPPTLFDYLPPDAL
                     LVIDESHVTIPQIGAMFKGDRSRKETLVEFGFRLPSALDNRPLRFEEWEERCPRAIYV
                     SATPGPYEYREAGDEITELVVRPTGLIDPVVEIRPVGTQVDDLMSEANERIKAGDRVL
                     VTTLTKRMAENLTEYLTEHGIRVRYLHSDVDTVERVEIIRDLRLGKFDVLVGINLLRE
                     GLDMPEVSLVAILDADKEGFLRSTGSLIQTIGRAARNVRGKAILYADKVTRSMQAAID
                     ETDRRRAKQVEYNEEHGIVPRSVARPIVDVLEGARSDAAEKEAKKGKGKSRAGVAEEG
                     ADYRSLSPAQLATRLKALEQQMYQHAKDLEFEDAARVRDQIRQLKEASLG"
     gene            21852..21926
                     /locus_tag="QEL58_000631"
     tRNA            21852..21926
                     /locus_tag="QEL58_000631"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:21884..21886,aa:Val,seq:gac)
     gene            22025..22099
                     /locus_tag="QEL58_000632"
     tRNA            22025..22099
                     /locus_tag="QEL58_000632"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:22057..22059,aa:Val,seq:gac)
     gene            complement(22194..22514)
                     /locus_tag="QEL58_000633"
     CDS             complement(22194..22514)
                     /locus_tag="QEL58_000633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005412816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675149.1"
                     /translation="MPMLALLLLCAGLFGRDADAGDVSLRRQILQADAGHAGAPAARD
                     PATLQLYRLRQDRVLRVGYQPLAADGQQQRSRPARYAQVWERVEGHWKLQRMISIDEW
                     VAQR"
     gene            complement(22736..22924)
                     /locus_tag="QEL58_000634"
     CDS             complement(22736..22924)
                     /locus_tag="QEL58_000634"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008268658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675150.1"
                     /translation="MIGKKVLSSVAGIVVVAAMAFGAAQAFAVAPKTGYAPGCEPHPS
                     CPFGNSGKPGQVLCCDPL"
     gene            complement(23025..23594)
                     /locus_tag="QEL58_000635"
     CDS             complement(23025..23594)
                     /locus_tag="QEL58_000635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005408866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA family protein disulfide reductase"
                     /protein_id="HDS1675151.1"
                     /translation="MIKRVLFPVVALLLSALIVALGWQNRQLRQINQQMASQLQDMRL
                     EAHGLALGSLAAPLALATTQQARVQIGGPRASPQILYFFSTACRYCLASMPHVRKIAA
                     ARGASELIGVGLPPYDELASYAGRHDLRFPIAIDSGGDASKRYRATVTPMLIVLGNDG
                     SVAYKHVGQLDEQVVHAAMTSLAPDLALP"
     gene            23757..23897
                     /locus_tag="QEL58_000636"
     CDS             23757..23897
                     /locus_tag="QEL58_000636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008268513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675152.1"
                     /translation="MSDHVPVSRPNPVLELLFGGNMLEGTFKAVVWVALLAAVLAWTT
                     FR"
     gene            complement(23950..24234)
                     /locus_tag="QEL58_000637"
     CDS             complement(23950..24234)
                     /locus_tag="QEL58_000637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019337170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675153.1"
                     /translation="MASVSPAAEAHAILRAPDLESAERAYLGLMPDLEHVNALARRAL
                     GLSRVADAARGYALSMTLVGLRLQELEMGEAIAKEQRQATLRSLRQAFNA"
     gene            complement(24265..25032)
                     /locus_tag="QEL58_000638"
     CDS             complement(24265..25032)
                     /locus_tag="QEL58_000638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MipA/OmpV family protein"
                     /protein_id="HDS1675154.1"
                     /translation="MPSLSPTLLRPLLFSAGIGLPLITHAADRSPGVQAGITAGATSG
                     AYAHYDVKPLVVPAISWQGQRFFASPGSLGMYLYKGQGLRLSAALTPYTLRFKTDDVN
                     DPQLRRLHSRQMSAMAGINGEYSADWGIVEAGVMREITGHGGGFESRLHYSYPIQAGR
                     FTWVPRVGVVHSSARLLDYYYGISDEEALRSGLAAYRPGSTTSPSLQIAVSTPLGTKW
                     RATGVVANQWFGDAVKDSPMARRGTQTSAFVSLMRSF"
     gene            25178..25849
                     /locus_tag="QEL58_000639"
     CDS             25178..25849
                     /locus_tag="QEL58_000639"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010486084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDS1675155.1"
                     /translation="MRILLVEDDPDLSRALQSGLERQGVVADVVGSLAEAAIALRDPV
                     HQLMLLDRQLPDGDGAGFVATARALRPNLAVIMLTAKGTLSDKVEGLDVGADDYLVKP
                     VAIEELMARIRAVSRRPSAMVTPSLRLGRLEFDFESLQAQVEGQPLALPRRQVLVLQA
                     LAMRQGRTVTRSALEAAVYGFDDEIQSNALDAHISKLRKALQQAGAGVEIHVIRGVGY
                     LLAEA"
     gene            25851..27194
                     /locus_tag="QEL58_000640"
     CDS             25851..27194
                     /locus_tag="QEL58_000640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005408871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing histidine kinase"
                     /protein_id="HDS1675156.1"
                     /translation="MARPIRSITLGLAWRLFLAQAFTVLFAVVALILTWGDKDSWGMD
                     MFMAEAVAKAVHSEGGRLVLDEARWRRLDADAGGNLWFAAVDDKGIWLERGTIPAIHA
                     PLLARLPTLGATELGSLVPPYLDVARVMIRNEDGRRITVMVGGAPKGGLLDGALMVLR
                     LIGLWFFLPLIVVTLLVMPTVIHRAMRGVRRSAQQAKELDIGQPGARLDAQLVSTEVA
                     PLVEAFNDAIDKVQQGYAARDKFLADAAHELRVPIAVVQARLSQLPQGELKSQLLTDV
                     ARLGNVAEHLLDLQRLDRNVGALQRLDLALLVREAAAELAPLVVGAGYGFEVDAPDAP
                     VWIHGDSLALGRVIANLVHNAIVHGGGRGTICVRLDERGLLEVSDQGAGIPVNDREAI
                     FEPFHRLRAAGSGSGLGLHLVKEIVQHHGGSVSVGEAAGGGASFRVNFHRGTVRR"
     gene            27254..29653
                     /locus_tag="QEL58_000641"
     CDS             27254..29653
                     /locus_tag="QEL58_000641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012479684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA internalization-related competence protein
                     ComEC/Rec2"
                     /protein_id="HDS1675157.1"
                     /translation="MVPERSAPPLFGGGSAAGLVLGALACMQLPVLLPLWLCAPLAVA
                     AGACWLARWRGRGWAMAVFGLAWATLHGHWALHRQMPPAAPAQDVRVQGRVVELPHSG
                     PGYTRFVLRVDEAGALPSLRGTRLQVTWSDPWRGPASAGSGGGRHAVRAGAHWDLSLR
                     LRAPRSRINPGGFDAERHALQRGISGNGTVRDPASARERLPARGLQAWRERSSAAIAT
                     QVAHPAARFVQALALGDTRGVSDADWEHLRALGLTHLVAISGFHVGVVAGFGALLCRV
                     SWWLWPALGRVRPRPQAAAWGAALAAAAYAVAAGGALPTVRAALMIGLVALARAGRRP
                     VAAGQGLALAAMVMVLPAPMSVLSAGFWLSFGGVLWLLWCLPRTAPEGVGGGLRGFLA
                     AQGVASVGLLPLCVALFGGTARLGPLVNLPIIPWWTLLVVPMSLLGTALHALHDGAGG
                     WAWRAAAGLFEVSWQALQPLALHPRAMWWLAEAPGWAVPAALLGVFWWLLPRGAGGGL
                     VGLLLCLPLLWPARGAPAQGELELLVHDVGQGTAVLVRTARHALWYDVGPPTGADGNE
                     RILIPALRALGQGPPEQVMLSHDHLDHIGSLPSLRRQLPGLHALAPPGSAIAGARPCR
                     QGMRWQWDGVDFQVLHPAPGSRQGGNEDSCVLRIASRHGVVLLPGDIGRSAERALLQA
                     WPTALKADVVLVPHHGSGGSSSAGWVAAVAPRLALVSAGHQNRFGHPRQEVVQRWQAQ
                     GAEVLATADAGAIRVWLGAQGLQLREQRVHASRWWDAAGRARSAAILSSIEQAAVGPE
                     G"
     gene            29657..30319
                     /locus_tag="QEL58_000642"
     CDS             29657..30319
                     /locus_tag="QEL58_000642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006429918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MotA/TolQ/ExbB proton channel family protein"
                     /protein_id="HDS1675158.1"
                     /translation="MWELVKAGGWPMVPLLLLGVLALAIILERFWSLRRTEVLPPGLG
                     QEVRNWAARGKLDPAHLQTLRANSPLGALLAAALEARNRPRDQIRERIEDTGRHLVHR
                     MERFLNALGTIASAGPLLGLLGTVIGMIQMFLGILDHGVGDVNQLAGGIGKALVCTAT
                     GMIVAIPALMFHRYFKGRIHGYVVEMEQEASALLDTLDGRPGVMNPAAAVRSSNAATA
                     KA"
     gene            30323..30745
                     /locus_tag="QEL58_000643"
     CDS             30323..30745
                     /locus_tag="QEL58_000643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004152323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biopolymer transporter ExbD"
                     /protein_id="HDS1675159.1"
                     /translation="MRIGNDRSQDEPHIDLVPLIDVILVLIIFFVVTTTFDARSTLQV
                     QLPTASQQQTNEPPRSLSVLINAEGRYFINDQEVLRSDVESVKQTIAAVAGSDREQTV
                     LLRADARTPYQAVVTAQDALGQLGFRRIAIATAPEVRP"
     gene            30742..32490
                     /gene="msbA"
                     /locus_tag="QEL58_000644"
     CDS             30742..32490
                     /gene="msbA"
                     /locus_tag="QEL58_000644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019658997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid A export permease/ATP-binding protein
                     MsbA"
                     /protein_id="HDS1675160.1"
                     /translation="MSSKHAPVWPIYKRLLGYTRAYWVLMVAAVIAMAVESVAGYFFT
                     KLMEPLVNRGFVNPEPRMAVILPLTILGLFLMRSAATWVSDYALAKTGRSVVRDLREQ
                     VLAKYLHLPSSHFDTESTPVMVSRLNFDTEQVTQASADALKTVVADTLTIIAMLAVML
                     QMSVKVTVAMLVVVPMIGVIVSYVGKRYRRISRGIQDGMGTMAQTAEQSLAAQQEVKV
                     HGTQQHEMSRYSRLANRMLALNMKVEITRAGASSVVQFLAALALAVIVWVSTREALAG
                     RLNAGQFMGLMISMTAIIPSLRRLTSVQSSISRGVSAAERLFGILDMPVERDEGRNTV
                     QRVQGELAFEHVMLRYRADSGIALDDISFVAKPGTVTAIVGRSGSGKTSLIRLVPRFY
                     EPSGGRITLDGVALDDYPLADLRRQVAMVGQKVMLFDDTIGANIAYGMDATDDQIRAA
                     AEAANAWEFIARMPQQLQTPVGENGALLSGGQRQRLAIARAILRDAPILILDEATAAL
                     DNESERLVQDALQRLMPERTTLVIAHRLSTIEHADQVLVMDHGRIVERGTHKELLSMG
                     GLYQHLHSMQFRERQD"
     gene            32490..33509
                     /locus_tag="QEL58_000645"
     CDS             32490..33509
                     /locus_tag="QEL58_000645"
                     /EC_number="2.7.1.130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005412821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetraacyldisaccharide 4'-kinase"
                     /protein_id="HDS1675161.1"
                     /translation="MAGKGTQTPPYWYDGSPAPLAMRLLAPLYAGVTALRRRAYRRGW
                     RKHYTLPVPVIVVGNITAGGTGKTPLTIALVERLRAAGWKPGVASRGYGREDADKPLW
                     VQADTPTAKGGDEPVLIAWKTGVPVRVDRDRVAAGKALIEAGCDVIVCDDGLQHYRLA
                     RDIEIEVVDAQRRYGNGRMIPAGPLREPVSRATECDFRVVNLGQADEDAAAQACGFGQ
                     WPMALHIDSAQPLAGGRARPLSYFKGQRVHAVAGIAHPQRFFDMLRARGIGVVPHAFA
                     DHQAYQPQDLSFGSQLPVLMTEKDAVKCRQFGNDWHYAVPLRAELPAAFWVALTDRLD
                     KLRPN"
     gene            33585..34358
                     /gene="kdsB"
                     /locus_tag="QEL58_000646"
     CDS             33585..34358
                     /gene="kdsB"
                     /locus_tag="QEL58_000646"
                     /EC_number="2.7.7.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019658995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate cytidylyltransferase"
                     /protein_id="HDS1675162.1"
                     /translation="MTEFVVAIPARYAASRLPGKPLRLLGGEPLVLHVARRALQAGAG
                     EVWVATDDQRIADTLSGLAEVKVAMTATSHASGTDRLAECARIAGWADDTVVVNLQGD
                     EPFAPAAGIRAVADALVGGNAPMSTLATTVEDAHTLFDPNVVKLVRNVRNEAMYFSRA
                     PIAWHRDGFARSRDTLPEGHAWLRHIGIYGYRAGFLQQFAAMPPGQLEQVESLEQLRV
                     LEAGYPISVAISPEPFPPGIDTPEDLERAEALLQAMAAR"
     gene            34355..34843
                     /locus_tag="QEL58_000647"
     CDS             34355..34843
                     /locus_tag="QEL58_000647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005408877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low molecular weight phosphotyrosine protein
                     phosphatase"
                     /protein_id="HDS1675163.1"
                     /translation="MRLLVVCLGNICRSPMAEGALRARLDASPLAGRVQVDSAGTGDW
                     HVGEPPDRRAIACAAGHGVDIGGLRARQLQAVDFDRFDWILCADEANLRDAGRLAAPA
                     QREQLALYLPWSGGKGRVAIPDPYTGGNDHFEQVWTLVDTAAERVVARLLHDADSGII
                     GP"
     gene            34840..36252
                     /locus_tag="QEL58_000648"
     CDS             34840..36252
                     /locus_tag="QEL58_000648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017113177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675164.1"
                     /translation="MNVQPVPDLPEFATWLNATPCTLTELRGRPVALLFVNAASAWSA
                     QRLAEFGQWLSRHPGKLQPLVLQVPRFDFERDPGTALKLLRRQGLTMPVLLDADWDGW
                     RRFGVSAWPTMVLLDAQGREQQRLVGQGAPGELERALNALCQGAPSAPPRGGSELHPE
                     TRQALRFPLGLAVSTERLYIADSGHHRILECSHGGRILRQFGLGTADFMDGNLAEAAF
                     HRPQALVLERDALYVADTGNHAVRRINLLTGIVDTLCGNGRPGAPVEGPVAQARQVSL
                     DHPIGLAIADNQLHIAMAGDNRIWSYHLGQRSLQWRAGSGAIDERDGSGHLAAFAQPS
                     ALAVVQQVLYVADALGSSIRALQLRGDLVQTLVGQGPWRFGNEDGPRAQARLQFPQAI
                     ALSPDAPLLWIADSGNGRLRTLRLGGGELTTQPLPRRLQGPAGLAVGAGAVWIAETDA
                     HAVLRLDPESGVLSEVPISE"
     gene            36249..38093
                     /gene="uvrC"
                     /locus_tag="QEL58_000649"
     CDS             36249..38093
                     /gene="uvrC"
                     /locus_tag="QEL58_000649"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004152329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrC"
                     /protein_id="HDS1675165.1"
                     /translation="MTDVPAPAFDGKAFAAHLSTAPGVYRMYAADDTLLYVGKARALR
                     NRVGSYFNGSPKNARIMSMISQIARMDVTVTRSEAEALLLENQLIKSLSPRYNVSLRD
                     DKTYPHVLLTREDWPRIALHRGPRAIPGRYFGPYPGVTAVRETLNLMHKLFKLRSCED
                     SVFRNRSRPCLQYQIGRCSAPCVELVAPSEYAESVRRAALFLEGKSDELTRELGEQMQ
                     VASEALEFEQAARLRDLISSLRSMQTRQYVDGRAADLDVLAVAMQGSQACVLLLAFRD
                     GRNLGTRPFFPRTNGEESPEEVLAAFVSQYYIEFEPPREILLDREIPDADLLVAALSA
                     SAERKVQLKWNVRGERAGYVELASRNAQLTLATELNSRNAQHARSDALRDMLGLAEPV
                     KRVECFDISHTLGEATVASCVVFDAAGPVRAQYRRFNISGIEPGDDYAAMRQAIDRRF
                     RRAVEEQGVLPDVLLIDGGAGQLAQAQAALADLGVEGVLLVGVAKGVERRAGHEALVM
                     PDGRELRPGAANPALQFIQQVRDEAHRFAITGHRGRRQKARMTSKLEDIPGIGPRRRA
                     SLLKHFGGLVGLKAAGEAEIAKVEGINDALAARIYANLHGLATPDAAE"
     gene            38113..38742
                     /gene="pgsA"
                     /locus_tag="QEL58_000650"
     CDS             38113..38742
                     /gene="pgsA"
                     /locus_tag="QEL58_000650"
                     /EC_number="2.7.8.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019399376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--glycerol-3-phosphate
                     3-phosphatidyltransferase"
                     /protein_id="HDS1675166.1"
                     /translation="MKLTLPTWLTLLRIVMIPVLVLVFYLPYTWTNFASAAIFGLAAI
                     TDWLDGWIARRYQLESAFGAFLDPVADKLMVAVALFLIVQGHPTPWMAFWAAVIVGRE
                     IAVSALREWMAELGQRAKVRVAMIGKVKTTAQMVALLCLLYSVAPNVPVEDIWMGWPV
                     FHIGDWTLAIAAVLTLWSGLQYLHAAWPSLREDERAARERSRQKKLGNG"
     gene            38887..38962
                     /locus_tag="QEL58_000651"
     tRNA            38887..38962
                     /locus_tag="QEL58_000651"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:38920..38922,aa:Gly,seq:gcc)
     gene            complement(39022..39582)
                     /locus_tag="QEL58_000652"
     CDS             complement(39022..39582)
                     /locus_tag="QEL58_000652"
                     /inference="COORDINATES: protein motif:HMM:TIGR00738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HDS1675167.1"
                     /translation="MAHIGTGVEYALHCLLWLVPPLEQRPSSRDLAELQGVPAAFMAK
                     IFPKLEKAGIVESTGGIRGGYQLARAPEDISVLDVVDAVEGQKALFDCQEIRGRCALF
                     DGNPPRWANRGVCGIHAVMINAQKAMREELARSSLASIAEGVQGKGRPASFAGDVQDW
                     FADRQVAREEARITGMRARTSAQDDD"
     gene            39867..41078
                     /locus_tag="QEL58_000653"
     CDS             39867..41078
                     /locus_tag="QEL58_000653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004577488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HDS1675168.1"
                     /translation="MSKRIVVIGAGFAGMWSALAAARLLDQAARHDVQIVLVAPSPEL
                     HVRPRLYEKGPERMKAPLQPIFDAVGVHYLAGRVEHIDVANQQVQVVGHGADAASQTL
                     HYDRLVLAAGSRLNCPPIPGLQQHAFNVDQIADAARLQVHLEHLADRPENAGRNTVVI
                     AGAGFTGIETAAEMPDRLRDVLGADAAVNVIMVERAEALGPDLGEGPRPVITQALTEL
                     GVSWRLGSGVAHVDAEGVTLENGERIDAATVIWTAGARASTLAAQIPGQHDAVGRLHV
                     DRTLKATGVDAVFATGDCAHAATDDDGNVAMMSCQHAMNLGRSAGHNAAADLIGEAMI
                     PYAQPKYVTCLDLGPWGAVYTEGWDRQVVLFGAEAKALKTRINTEWIYPPSGERAEIL
                     ALADPLRIVVA"
     gene            41242..42348
                     /locus_tag="QEL58_000654"
     CDS             41242..42348
                     /locus_tag="QEL58_000654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005412826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HDS1675169.1"
                     /translation="MPHIPSAYDQDVVIVGASFAGAACALAAAQYGLRVCVLERKADP
                     GERLHTTGIVVKEAMEQTWLGRMPEHLLQRVADVRLYAPNLRNVLLTAPGYYFLTTDT
                     PNLMRWLASELRANGVDLHLQQSFTGARRSGEGWDVEGVGRCAYLVGADGARSRVAQR
                     TGLGRVRDNLYGVEREFAGLQLPQGDALHCFVSKRFAPGYIGWVAQNPTGLQVGLALR
                     HDPAQVRPPDIDGFLEHVRDVVGIPPAARPSATRAGLVPCGRPDGPITGPGVILTGDA
                     AGIVSPLSAGGIHSSWRHGWAVGDAIGRHLRGTGPQPEHVARQVAPAFHGKRLLRWAM
                     DHLQADWPLNVLLHTAATRRVAEQIYFHRRGLRT"
     gene            42465..42540
                     /locus_tag="QEL58_000655"
     tRNA            42465..42540
                     /locus_tag="QEL58_000655"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:42498..42500,aa:Gly,seq:gcc)
     gene            42911..>43703
                     /locus_tag="QEL58_000656"
     CDS             42911..>43703
                     /locus_tag="QEL58_000656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005408898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HDS1675170.1"
                     /translation="MLLLHVGGLVVRRITPVAVPRTGRGSSLQAVLRPGALLASLALA
                     GCMSVPVPDLPGGTPSAWTQLPQGQGVAVDARQWWKVLADPALDGLVDQAIAGNLDLQ
                     QATLRLQAVRIVAGTSDSRFLPEISASAKQVQDAAAVDTYFHAGIEAIWDLGLFGAAE
                     SAQLSAQASAGNAEALRSAAQVAVIADVVRSYLDLTVAQAQQDLLARQQAVDDRGEQL
                     ALVRQRLRLDEPGELDRLRARQAATRAATAQASENADNAARALALL"
BASE COUNT         7147 a        14226 c        15024 g         7306 t
ORIGIN      
        1 tcctcggcat cgtccacatc cggccggatc tggctgatcc gtgccgcgcc gggcccggta
       61 aacgagatca gctggtcgcc gcgcagcacc atgcggccca cgtggcgatc gatgccgtca
      121 taggaatact cgaacttgaa ggtgcgctcg aatccgagcc ggccatcctc gccgcgcgac
      181 aggcgcaggc cggtggcgtg cactgcctgg tccagccatt gcacatcggc ggcgcggcag
      241 gcattgcggc ccagctcgac cgcgcgctcg gcggccgaac gggcggcgtt ccagaagaaa
      301 tagatgattc cgccggcaat cagcaacagc agcagggtgg gcatggcgtc agcggtcaga
      361 ggtcgatccg gcaaagatgg cggcgaacac gcgctggatc aagcgctgca gtcaccgccg
      421 cggctgcggc tcgctggaca ctggctgcgc gggcacgatg gccggttgcg gcgccggcgc
      481 ggtctgcatc ggcgtcgcag tgggcgaggg catcaccagg ggtgatgtgg cggtcagctg
      541 cagcagtgct gcccagtcct ggcggttgaa gctgcattcg tcttcgcggc ccggtgtgca
      601 gctggggtcg atgccggtgc tgctgcgttc gcgtgccggc ggcagctgga tcagcccggt
      661 gcggtccagc ggcagcagcc gcatcgccac ggtattcatc acattgcccc ccaccaggta
      721 cagggtctgg tcgccgccga ggttggccgc caccaccact tcgcaatgtg atttccagtg
      781 gccgaccgaa ccattgccga gcgcctgtac cagcccgctg tagctcagcg tggtgctgcg
      841 gtcgcgcagg aagcacagca gatcgcccgg cgcgggcttt gcggtcgcgg gatcaaccag
      901 ccgatagggc acaccggaag ggccgccctg gtaggcagca cggatgtagt cgatgtggcg
      961 cggcgaggtg ttgaagccgg gcacgccggc acgcaccatc acccaggaaa tgaaggcggc
     1021 cgaccacggg ttgtcgacca ggaacgcgcg gcagtcgctg tcggtgtagc gcgtgcccag
     1081 cggcgccagg cagctgctgg cgccggcgat gctgcccatc gcgttgagcg tgccgctgtc
     1141 acgccaatag ccggccacgc gctgccaggc gatcaggccg ttgtcggcaa gatgctcgct
     1201 ctcggcctcg gtgacgctga ggcttgcagc gcgaccatcg cgatcgatga agggccggaa
     1261 ccacagccgg tgttcgttgc aggcggtgtt gcggatggcc actgccaacg ggctcaggcc
     1321 gtagcggggc ggtacgtcac aggcctccgc agccgctgcg gaaaaggggg cggtcgcgag
     1381 cagaaggcag gcaggcaaga gcatccggcg catgcgcggc tcctgtgggg gatggccgca
     1441 gcgtcgcagt gccgtcgtga acgcagggtg tgagaacggt agtgccggcc gctggccggc
     1501 accatgcgac cgtcacctca agccggcggc gggcccagct tcaacgacag atcgatggcc
     1561 tgcacgtgct tggtcaggcc gccgacggaa atgcagtcca cgccatcctc ggcgatcgag
     1621 cgcaggccac ccaggccgac gctgccggag acttccagcg ggatacggcc ggcggtgatg
     1681 cgcacggcct cgcggcgcag gtcggggctg aagtcatcca gcaggatgcg ttcgcatccg
     1741 gcctccaggg cctggcgcag ctgcgccaga tcctccacct cgaccaccag tggcagcgcg
     1801 ggccactgcc ggcgtgcgcc tgccacggcg gcggccagcg aaccggcggc gcggatgtgg
     1861 ttttccttca gcatcaccgt gtcgtacagg ccgaagcggt ggttgtcgcc gccgccgcag
     1921 cgcacggcgt acttctgcgc caggcgcagg ccgggcaggg tcttgcgggt gtcgaggatg
     1981 cgcgtgccgg taccggccac ggcggccaca tagcgggcag tggtggtggc ggtgccggac
     2041 agcgtctgca ggaaattcag cgaggtgcgt tcggcgctga ccaggctgcg gctgcgcccg
     2101 tacagcaggg ccagcacggt gcctgcggtg acagcgtcgc cttcggaaac ctgccattcg
     2161 atgcgcacgt ccgggtcgag cgcacggtgg gtggcgtcga accaggggcg gccggcaatc
     2221 accccatcct gcttgcacag caggtaggcg ctgtcggcct ggtcgggcag cagggcggcg
     2281 gtgacgtcac cactgcccag gtcctcggcc agcgcacgcg cgacatcggc ggcgacaacg
     2341 gccgcatccg gcgtcggcag cgtgctcatg cggccgggaa gtcggcgatc tgggcggtcg
     2401 ggatggcttc ctcggccagc agcaccggaa tgccgtcgtc gacgcggaac acctgcttgc
     2461 ggtcgcgggt gaccagcgct tcgcgcagcg gctgcgccag cgggttgcca tcggccttgt
     2521 tcaccgcgcc ggcggaaatg gccttgttga gggcttccag gcccttgcca tccagcaggg
     2581 acaggggctg gcgggtgtcc ggcgacacca gcaggtcgag cagcttgcga tccatggttc
     2641 ttcgtcttgc gtggaagacg gctagaatac gtctttaagg caggtgacgg ccaatgaccc
     2701 ccaacccgat cgcgccgctt gtcggcatcg tcatgggttc ccgttccgac tgggaaacca
     2761 tgcagcacgc cgcccagaag cttgaagccc tgggtgttcc gttcgaagtg aaggtggtgt
     2821 ccgcgcatcg gacgccggat gtgttgttca gttacgccga gcaggcgggc ccgcgtggcc
     2881 tgcgcgcgat catcgccggt gccggcgggg ccgcgcacct gccgggcatg atcgccgcca
     2941 agaccgccgt gccggtgctg ggcgtgccgg tgcagtccaa ggccctcaac ggcatggatt
     3001 cgctgctgtc gatcgtgcag atgccggccg gcatcccggt cgccaccttt gccatcggca
     3061 atgccggcgc ctccaatgcc gcgctgttcg ctgcagcgat gctggccagc gaccagccgg
     3121 cgatcggcca ggcgctcgac gccttccgtg cgcgccagac cgaagacgtg atggcccacg
     3181 acgacccgcg ccaatgagcc tgaccgtcgg catcctgggc ggcggccagc tcgcccgcat
     3241 gatggtcctg gccggtgcgc cgctgggact gcgcttcgaa ctgtacgatc cggcggccga
     3301 cgcctgcagt ggcccgctgg cgcccctgac ggtcggcgcc ttcgatgacc gccaggcgct
     3361 ggcggacttc gcggcgaagg tggatgtggt caccttcgat ttcgagaacg tacccgccga
     3421 cagcgcgcag ttcctggccg accgcgtgcc ggtctacccg ccgccggccg cgctggccgt
     3481 ggcccaggac cggctgagcg aaaagaccct gttccagcag ctgggcatcc cgctgccggc
     3541 cttcgccgac atccgcagcc gcgacgagct ggctgagaag gcggccgcgt tcggcctgcc
     3601 gtgcattctc aagacccgcc gcctcggcta tgacggaaag ggccagttcc gcctgcgcag
     3661 cgaggccgac atcgacgccg cttgggatgc gctgggtgcg caggtcgagc gcacgggcct
     3721 gatcctggag ggcttcgtgg ccttccagcg cgaggtcagc gtggtcgccg tgcgtggccg
     3781 cgatggcagc ttcgaggcgt ggccggttac cggcaactgg catgtcgacg gcgtgttgtc
     3841 ggccagcgtg gcgccggccg tgctgtccga cgccgagcgg caggctgcga tcggctatgc
     3901 ccgtcgcgtt gccgagcacc tgcagtacgt gggcgtgttc gcgctggagc tgttctgccg
     3961 cgatggcgaa ctgctggcca acgagatggc gccgcgcgtg cacaactccg ggcactggac
     4021 catcgaaggc agcgagacct cgcagttcga gaaccatctg cgcgccgtgc ttggcctgcc
     4081 gctgggcagc acccgcatgc tcggccatgc ctgcatgctg aactggctgg gcgcgatgcc
     4141 cgatcctgcg ccagtgctgg cccaggccag cggccattgg cacgactacg gcaaggagcc
     4201 acgcgagggc cgcaaggtcg gtcatgccac gctgcgcgat gatgatgctg cggcactggc
     4261 cgatgcgctg gaccaggttg ggctggagct gggccgcccg tcccaggtgg cgccggccgc
     4321 gcacgccctg cgcaatcgct gagcaggagg aatgccggcc agcggccggc attccccggt
     4381 attcctgcaa cgatgtggcg cgccggtgca ggcatcggcg caacgttccc ggtggtagcg
     4441 tggggctcct ttcccaggag tcacgaccat gcttgactgg aatgcctacc gcaaggaact
     4501 gaagggccgc atcggcgaga tcggcaagct ctcgccggat acagtgaagg ggtatgccac
     4561 cctgtccaac gccggcgcgc agaccaacca ccttgatgcg aagacccgtg agctgattgc
     4621 gctggcggtg gcggtcacga cccgctgcga tggctgcatc accgtgcacg tggatgccgc
     4681 gttgaagcac ggcgccaacc gcgaggagat tgccgaagcg ttgggcgtgg ccgtgtcgct
     4741 caatgccggc gccgcgctgg tgtattcggc gcgggtgatg gacgcggtgg ccgcacacga
     4801 gagtgcgtga tgccacgctc tgcttcccgg tgggttgccg gccagcggcc ggcactaccc
     4861 gtggttgaac agccggctca gcgcagctgg ctctcggcga attcccagtt gaccatctgc
     4921 cagaacgcat ccaggtaacg cccacggtcg ttctggtagt cggtgtagta cgcgtgctcc
     4981 cagacgtcgc agcacagcag cggggtgctg tcgccggtca gcggggtgcc ggcattgcgg
     5041 gtggcctgga tgcccagctg cccgcccggg tgctgcacca gccacaccca gcccgagccg
     5101 aacaggccca gcgcggtgcg gttgaattcc tcgcgcaggc gctgcgcgtc gccgaactgg
     5161 cgcttgacca gttcgccgag ccggccctgc ggctcgccgc caccgcgagg gcgcaggcac
     5221 tgccagtaga agccgtggtt ccaggcctgg gcggcggcat cgaacagttt gccctgggcg
     5281 tggcggacga tctcttccag tgacgcttct tcccactcgg tgcccaggat gccggcgttg
     5341 accgcatcga cataggcgcg gtggtggcgg ccgtggtgca gttccagggt ctgtgcggac
     5401 aggtgtggct gcagggagcc ggaaaggtag ggcagggcgg gcaattcgac gggcatggac
     5461 aggttcgtgg ccagaggggc ggcggcagcc ggttccatcc gcttacaatg gcggctaccg
     5521 tgggcagtct agccgaccac cgcggtcggt ttgtccgacg aagcaaggag tgtggttgtg
     5581 gcggtgatgc agcaaatcca ggccgaggtc gatcgttacc cgctcgtgct gttcatgaag
     5641 ggcaccccgc agtacccgat gtgcggcttc tccagccgcg ccgtacaggc attgatggcg
     5701 gccggcgccg tcgccctgcg caccgtcaac gtgctggaag agcccgagat ccgcgccaac
     5761 cttccacgct tctccaatct gccgaccttc ccgcagctgt tcatcaatgg tgagctgatc
     5821 ggcggctgcg acatcgtcct ggagctgttc gagtccggcg agctcaagcg catcgtcgaa
     5881 gaggcgaccc agggatgagt gcctggccat cgacgtcacc gaccgacggg gcgctcgatg
     5941 gccgcccgtt acaggatcgc gtggtgctgg ttgccggtgc gggcggtggc ctgggcagtg
     6001 ccgcggcggt ggctgctgca gccgccggcg ccacggtggt gctgctggga cgcaagccgc
     6061 gccggctgga tcgggtctac gcccaggtcc aggccgtcgg cgcggaaccg ctgctgtacc
     6121 cgttggacct tgaaggggcg ggccccgacg actatgccga gctggcccag gcgctccagc
     6181 gcgagctggg gcggctggac gggctgctgg tctgcgccgc gcatttcccc ggcctgaccc
     6241 cgttcgagct ggccgatccg gccagtttcg cccgcgcggt gcacgtcacc ctgaccgccc
     6301 cggcgtggtt ggcccaggcc tgcctgccgc tgctgcggca acgtgaggat gccgctctgg
     6361 tgtttgccgt cgacgctccg gagcgggtcg ggcaagccta ctggggcggc tatggtgtgg
     6421 cccagcatgg cctgcgtggc ctgatcacca gcctgcacga cgaactcggc cgcagcccgg
     6481 ttcgggtcag tggcctgtac ccggggccgc tgcgtacggc gctgcgtgcc cgggcctact
     6541 cggttgacca ggatccggcc gcgcagggcc cggaagccgc ggctgccgcg gcggtaaccc
     6601 tgttgtcccg cgccggccat gcctggcggg ggcggattct cgatgccagc ggagcgtttc
     6661 ccggcgagtg agtcccgggg aaagacggag tgaagaaccc gtcacgattg cgttgcgatc
     6721 tggtgccgtt tgtcgcacaa ccgtcacatt gatggcgtag cgtgttaatc tagtgttaac
     6781 cgttatggct gccttcagcc aagcggtagg gaaccccaga taactctccg accagccacc
     6841 cgcagggctg tttggatgcg ctttttttcc gccatcgcca actcgcatcg aggctaccga
     6901 aaaatgaccc acccactccg gatgtccaag cttacccttg gtctcgtggc tgcactcgcc
     6961 gccgctcccg ccttcgccca gagcacctcc gccggtgtcg gcggccaggt gatgtccgcc
     7021 gcaggccagc ctgtcgccgg tgctgaagtc accatcaccc acaccgagtc gggcaccgtt
     7081 tcgcgtgcca ccaccgatgc gtcgggtcga tacaatgcgc gcggcctgcg cgtgggtggt
     7141 ccgtacacca tcaccatcac caagccgggt gctggcacca agaccgaaga aggtgtctac
     7201 ctgaacctga accaggtcaa caccgtcaac gccaacctgg gcggtgacct ggctgccacc
     7261 aacctggacg cggtcaatgt tgttgccgct gccgtgggca gcgatctgtt cagcgcctac
     7321 aagatgggca ccggcaccaa cgtcaaccgc gagacgcttg agtcgctgcc ttcggtgaac
     7381 cgcaacatcc aggactacat ccgcctggat ccgcgcatct cgcaggtcag caaggctgac
     7441 ggcgcgatct cggtcggtgg ccagaacacc cgttacaacg ccatccgcat cgacggcatc
     7501 ggcgccggcg acccgttcgg cctggaatcc aacaacctgc cgaccgagcg tcagccggtg
     7561 tcgatggatg cgatccagga aatcaacatc gacatcgcca actatgacac caccatcgcc
     7621 ggtggtaccg gtgcggtgat caatgcggtg accaagtcgg gtaccaacaa cttcggcggc
     7681 accgtgtact acgcgtaccg cgacaaggac atggtccgca aggagctgga cggcgtccgc
     7741 ttcaacggct tcgatgacga gaagacctac ggcatgacct tcggcggccc gatcgtcaag
     7801 gacaagctgt tcttcttcgc caactacgag aagatggagc gctctgctcc gggcgtcagc
     7861 ctgaccgatt cgccgtacgg caagggcacc atcaccgacg ccgacatcgc ccgtgcgcag
     7921 cagatcgcca ccggctacgg cttcgacgca ggctcgctca atcccccggc caacaagacc
     7981 gaggtggaag agtacgcgct gaagatcgac tggaacatca acgagaacca ccgcgccgcg
     8041 gtgcgttaca acaagctcga gcagaacgtc gtccgcttcc cgcagatcag caacagcgcg
     8101 atctcgctga gcaccttctg gtaccagcag ccgaagacct acgaatcctg gatgggcgaa
     8161 ctgttcagcg actggtccga gaacttctcg accgagttca agatctcgca caaggaatac
     8221 acctcggtcc gtaccactcc gtccagcctg ccgcagatcc aggtccgtgg tttcggtgcc
     8281 agcggcaatg actcgctgta cttcggtacc gagcagaact cgcatgtcaa tgcggtcgag
     8341 agcaaggagc tgagcgcctt cggtgccgcc aactggtaca tcggcgacca caccgtcaag
     8401 ttcggtttcg actactccaa gaacgacctg atgaactact acggccgcaa cgtcaacggc
     8461 gcgtacgtgt tcaacaacct ggctgatttc gcagcgggcc gcgtcaacca gtacgtggtg
     8521 cgtgccccgc gcgcgggtgg cagctacgac gacatcccgg ccaattacac cctgaagaac
     8581 accggtctgt tcatccagga cagctgggcg gtcaacagca acctgaccgt gcagggcggc
     8641 gtccgcatcg acatgccgga cttcagcaac cagcgcctgt acaacccgcg catcatggag
     8701 ctgtacggct acgacaacac caagctgccc gacaagaagc tggtgcagcc gcgcttcggc
     8761 ttcaactaca ccttcgacag tgatcgtccg acccagctgc gcggcggcgt gggcctgttc
     8821 ggtggcgccg ccccgaacgt gtggctggca ggtgcctacc agaacaccgg cctgaactac
     8881 accgagtaca ccgttcgtaa ccagaccggc attttcaccc cgaacaccaa cccgccgtac
     8941 atcccggctg cgggtgccgg tgctcgccag aacgtcgaca tcgccgcgcc ggatctgaag
     9001 ctgccgtcgg tgtggaagtc gaaccttgcc ttcgaccacg aactgccgtg gtacggcatc
     9061 gtcgcgtcgg ctgagttcct gtacaccaag gtcaagagcg gcatctactt cgagcgcctg
     9121 gacctgtaca agaacgctgg tggcccgtcg tacacccgta tcggccagga cggtcgtgag
     9181 ctgtactgga acccgcaggg ctacgtgccg tgcgccggca ccaactgctc gatccgcgaa
     9241 ggcgcgaccg ccgtcggcgg tggcaccgtg ggtggcaagg ccaaccgtcc ggatgacatc
     9301 ggcgacgtgc tgctgatgcg caacaccgac aagggcagca gccgccagtt caccgtcggc
     9361 ctgaacaagc cgctgaccga gaactggggc tggtcgctgg cctacaccta caccgccgcg
     9421 aaggaagtca gcccgctgac cagctcgcag aacacctcca actggggcag caccctgatc
     9481 ggcaccgcca acgagaacgt ggcctatgat tcgcgctacg cgatcaagga ccgcgtgacc
     9541 ggttcgatca actggaagaa ggcgttcttc ggcaactaca acaccaccgt gggcctgttc
     9601 tacgaaggtc gttcgggtcg tccgttcagc tacatctact acaacgacat gaacggcgac
     9661 gccgctgcca ccaccggcgc cggctacttc aacgacctgt tctacgtgcc gaacggcccg
     9721 ggcgacgtca agttcaccgg cggcgcgacg atggagaagg ccttcttcga ctggctggcc
     9781 gccaacccgc agttggcgaa gtaccagggc cagatcgccc cggctaacgc cttccgcacc
     9841 aagtgggtca acagcttcga cctgcacatc gcccaggaat tcccgggctt cgtgaaggag
     9901 cacaagggtg agctggcgct ggacatcatg aatgtcggca acctgctcaa caagaagtgg
     9961 ggccgcatcg aagattacgg cttcaactcg accgcccgag tggccagcta cgcaggtatc
    10021 gatccggcca ccggcaagta catctacaac ttcaccggca gcaccgatac cccgaccatc
    10081 caggaaaaca acaacgacaa gggcaacacc ggcgtgtcgc gttggtcgat gcagctgacc
    10141 ctgaagtaca agttctgatc cttcagagcc tgatgatgta aatggaaacg gccggggaaa
    10201 cccggccgtt ttccgttcag gcgaaagtcc ttgcaggcgg ctctgcatgg gcgtagcatc
    10261 cagaaatgtg cgcggcgcca atgccgccga agcggtccca ggcaggtgat cacgggcagc
    10321 acatatccaa cggtcgggtt tcccggccgt tttgcttttt aagggggcgg cagtacagtc
    10381 ggaaaccttg aaggaagcga aaaattggat atgaccacga acgaaaaagc agcccgcgcg
    10441 ctgccggtgc aggacgcacg gatctacccg cgcggtgggc tggacgtgct gtcgcgggcc
    10501 gaagtggcgc gcttgcgcga tgcctccgcc ggcggcatgc acgagttgct gcgccgctgc
    10561 gcgctggccg tgctgaccag cggcagtgcc tctgacgatc cgcgtgcggc gcgcgatctg
    10621 tatcccgatt tcgacatcca ggtggcgcag caggatcgcg gcgtgcgcat cgacctggtc
    10681 aacgcgccgg cgatggcctt cgtcgatggc gagatcatcc gcggcgttgc cgaactgctg
    10741 ttcgcggtgg tgcgtgacct ggcctacatg gccatcgaaa tgggcccggc ctatgcggcc
    10801 gagctggagt cgtccgaagg catcaccaat gcggtgttcg gcctgctgcg caacgcccgc
    10861 atcctcaacc cgggtgatcc gaacctggtg gtgtgctggg gcggccactc gatctcgcgc
    10921 gacgaatacc tgtacaccaa gcaggtgggc tacgagttgg gcctgcgcgg cctggacatc
    10981 tgcaccggct gcggcccggg cgcgatgaag ggcccgatga agggtgccac cattgcccac
    11041 gccaagcagc gccgtaccgt gacgcgttac atcggcctga ccgagccggg catcatcgcc
    11101 gccgagtcgc cgaacccgat cgtcaaccac ctggtgatca tgccggacat cgagaagcgc
    11161 ctggaggcct tcgtccgcat cggccacggc atcatcgtgt tcgccggtgg cgtcggtacc
    11221 gccgaggaga tcctgtacct gctcggcatc ctgctgcgcg aggagaacaa ggatctgccg
    11281 ttcccgctga tcctgaccgg cccgaccgtg gccgcgccgt acttcgagca gatcgaccgc
    11341 ttcatccgcc tgaccctggg cgatgaagcc gccgagcgct acgagatcat catcggtgac
    11401 ccggtggcgg tggcgaagaa gatggccaac ggcatcaagc gcgtgcgcga acaccgcctg
    11461 gcgcagaagg actcgttctt cttcaactgg tcgatcgaga ttccgtggga ataccagcag
    11521 ccgttcgtgc cgacccacga ggcgatggcc gcgctggacc tgcaccacgg gcgtgcgcca
    11581 cacgcgctgg cggccgacct gcgccgggcg ttctccggca tcgtggccgg caacgtgaag
    11641 gaagacggca tgcgccgcat cgagcagttc gggccgttcc agatccacgg cgacaccgac
    11701 atgatgcagg ccctggacgc gctgctgcgc gccttcgtcg aacagcgccg gatgaagatc
    11761 tccggcgaat accagccctg ctaccaggtg ctggcctgag cctgcgccgg cgcgatgggg
    11821 ctcgcgccgg gccggacagg agagggcggg tcgtcaagcc tttgacgccc gtcgtcccgg
    11881 attgaccgtt catcctgccg ccgcttgccg gtggcagggc gatggcccat cgtggccatc
    11941 aacacgctgg ggagcgtcca atgtctttgc gccgggaaag cggcttcacg ttgatcgagc
    12001 tgatggtcac catcgccgtg gtggcgatcc tggccgcgat cgcgtttccg agcttccagg
    12061 gcaccctgcg ttccagccgg gtgacctcgg gcaacaatga aatcctgggc ctgctcagcc
    12121 tggcccgcag cgaggcgatc cgcagcaacc gcggcggcgg cgtgtgcggc agcagcgatg
    12181 gcgccagctg cgacggcagc tggtctggcg gcatgctggc cttcgccgat accaacggtg
    12241 atggcgagat gtcgtcgggc gagaccgtcc tgcgcttcgt caatggaagc ccgaagctga
    12301 cggtcagcgg gccgtcggag gtgatcgcct tcgatggccg tgggcgccgc agggccagcg
    12361 ccgatcagca gatcctgctg gagccggatg tctgcagcaa ggacgcgctg cacaagcgca
    12421 cattgacggt gaacgcctcc gggcagatcc gcagcaccaa ggaagcctgc ccatgaaatc
    12481 ccgttccgtc cgcgcgcggc aggcaggggg cttcaccctg ctggaagtgc tgatcgccat
    12541 catcgtgctg gcattcggcc tgctgggttt cgcgctgctg cagaccatga acgtccgctt
    12601 cgtgcagagc gccaactacc gtacccaggc caccaatctt gcctatgacc tgaccgagca
    12661 gatgcgcagc aaccgctatc aggcggcgtg gtataccacc gcgtcgtttg ccgcaggcag
    12721 caagaccgcc gagaaggcgt gcagtgccga taccggcgac gtcgccattt ccgccaaggt
    12781 cgcgcgctgg cagtgccagg tggtgaaggc gctgggtgat gacgccggcg cggaagtcac
    12841 ctacaacggc ggcaacgtga gggtggccgt cagctggggc gaccagcgct gggatccgga
    12901 cgatccggac aaggccacca ccttcgccct ggatacggag ctgtgagcat ggtcatgaac
    12961 cgtcgtgccg ccatggccgg cctgtcgctg gttgagctga tggtcgcgct ggtgatcagc
    13021 ctcgtgctga tgctgggcgt ggtccaggtg ttcatcgcct cgcagacggc ctcccgcctg
    13081 tccgagggcg cctcccgcgt gcaggagaac gcgcgtttcg cgctggattt cctggagcgc
    13141 gacatccgca tggccggaca catgggctgc gtcaacgacc aggcccatgt ggtgaagaac
    13201 cagggcgacc cggtgtcaca cctgggggca acctcgggcg acggcagtcc gctggatttc
    13261 agcgtgtcca tccagggctt cgatgcgccc gagacgacgc cgggcgggag cctgacgctg
    13321 ggcgcggact ggtcggctcc gaccggcctg cctatcgcga tcgaagggct catcccggca
    13381 cccgccggcg gcagcgacgt gctcgtcctg cgcttcttcg cgccggaagg cgtgccggtc
    13441 acggccattt ccacggacgg cggcaacgcg ctgctggaca tggacagcac ccgcgtcgcc
    13501 cgcctgaccg gcggtggcgt gggtgatccg accctgttcg gcatcgccga ctgcggccac
    13561 gcggatgtgt tcgcgggcac gttgagcgcc gcacgggtca ccgccgcctc gctcgacctg
    13621 tcgcgctatg ccgcgcagcc caccgggcag acgatgctgt atcgcgccga gtcgatggtc
    13681 tattacgtgg gcatcaatcc ggagacgaag cagccgggcc tgcgccgcgc gcgtgccgac
    13741 agtgatggcg cctactcgat caacgaagaa ctggtggaag gcatcgaaag cctgcagttg
    13801 atgtacggcc tggacaacac cgccaacatc agcctggaca cgccgccggc cggcaacatc
    13861 acgcagttcg ctgcggccga tggcgtcagc actgatgccg atgccgcggg tgccgcgcaa
    13921 tggctgcgcg tggggcaggt gcaggtgggg ctgctggcac gcagtccgtc gccgtcgtcc
    13981 tcgacccgct cggccaatgc gctgtccgtg ctcggcgtgg gctttgccaa cggcgacaag
    14041 tccgacggtc attaccgctc cagctatgaa gtgtcgattg cgctgcgcaa tcgcctgttc
    14101 ggaaactgac catgactcct ttcccgcgct ccttccggcc tgtcgtcgct cccgcccagc
    14161 agcggggtgc ggtgctgtat gtggccctgg tgatgctcat cctgctggcg ctgctcggaa
    14221 ttgccggcat gcaggtggcc ggcatgcagg aaaagatggc ggccaactac cgggcggcca
    14281 accgcgcttt ccagaattcg gaaggcgtgg tgcgggcggc cgagcgttcg gtggaacaga
    14341 tcaccaatcg cgaaagcgtg agcgagggca gcctgctgca ggcgggggat gtatcgcgtg
    14401 tctgcgatga cggcttcgat cccgccggct gggcggagga ccggcgcgac gagacggcgc
    14461 cggccgtcaa cgtgcggcag atcgacagct gcgtggtcgg cgaatcgtcg ctggacatgg
    14521 gccggccact ggatgacacc acaccgatct accagatcac cgggttcgct accgacgatg
    14581 ccgattcgag ctcgtcgtcg gtggtgatcg acaccgtatt caaactctga ggacgcaggc
    14641 catggcttcg cgcaaattcc gcttcatggc cgcaggcggc gccgcactgg cgctgggggg
    14701 aggctatttc atctacagcc tgatggccgc ccaggcccag ggcacgttgg cgcaggcgcc
    14761 gctgaacatc caggtgcaga cgccgccagc gttcctgatg gcgctggacg attccggttc
    14821 gatgctgtgg gaaacgctga acaatacgcg cgacggtgct tatcgctggg atggcagcag
    14881 cttctacaac aagggaacag ccaacggatt cgatggttcg gggcagcgtt acctgtatgt
    14941 gtttccgagt tatgggcggg atagcaatgt ggctatcccg ccgttggata actttggatt
    15001 cgcgcgttcg ccagatgtca attcatccta ttacgatccc cgtgagagct acccgggctg
    15061 gaagacggga ctgtctgcgc cggcaacctc caattacctg gagatcaaag cggccagtgc
    15121 acctctcgac ccccggccgg ccggcgcgcc cgccaagatc ggtggtgcgc tgaatctgac
    15181 ggcggactcg ctgttgacca gcatgcagac tggcggcagg gattcgggaa gctggcgatt
    15241 ccgcttccgt tccgggatga aactgccggt aggcacccgt atcgagcgcg gtcggtgcag
    15301 cttgagcggt ggagctgtgc agggggaggg aacgtttgac agagtcaccc gtgagacttc
    15361 catcaacagc tcaagctgcg acgctgctgt ggctttctac ccggcgacgt tcttccttga
    15421 gaatcccgct acgcttcctg cggattacgg ctataccgcc acaccggtag ctattgccag
    15481 ttcgccgggt ggccggccgg ggacgctgta caagtacgag atcaagcttg cgaacttcgg
    15541 caataaccaa gcgaagtacg acaatgccat gcagagcttc gcaaactggt tcagcctgta
    15601 ccggactcgc cgcgaggcgt tgatcggcgc ggccaccaat gcgctgtatg acaccaccaa
    15661 tctgcgagtg ggctggttcc gcatcaatgg tcgacgtcca gtgaccatgt tcgacatgac
    15721 gaccgagtcg caaagggcga agctgctcag cgaaatcacc agtgaaatgc gggccgacga
    15781 cagtacgccc aatcgttctg ccgccgacta cctgggcaag cagttccagc gcacggatga
    15841 aggggctccc gtgcttctgg cctgccagaa gaatgcgggc atgctgttca ccgatggtta
    15901 catcaatgaa gatggaaaca cgacattgat gaaggacctg gtggcgccct actacaaggg
    15961 ccctctggtt ccttcgcttg ataacggctc ggtgccagtt cctgcagagt gcaagggttc
    16021 cagtccggac gcttcactgg actgcaacaa gcagctgcac atgaatttct acggcgtgac
    16081 cctgggtacg cagggcaagg agttcggcgt caagtatctg ccggacccgg agcggccttg
    16141 ggtcctgagt cccgacccct acgtgacaaa gcccaatttc ccgaccacaa cgcagaacct
    16201 caagccggag gcagtcgacg agctgtggaa cgcggtgtat gacagccacg gcgaaatggt
    16261 caatgccacg cgcccgggcg agatcactgc tgccatgcgt cgtatcatca gcaacgtcgc
    16321 ccagggcgca acgccgtccg gttcgcgttc gttgaccggt gcgcgcatcg gcgtgggctc
    16381 gctgtcggtg gagccgttct acgaggcaac caacaacggc acggactggt atggaaagct
    16441 gcatgccttc aagctgaagg ttgatgcgac cacccgcgcg atcgtttctg aagaagcgtg
    16501 ggaagcggcc gcgcagatgc cggcggccgc atcgcgccgc attcgcttct ggcgcgatgg
    16561 tgcgctggtg gacttcaccg gtggcaatgt cagcctggcc aatctgtgcg acaagtcggg
    16621 tgtgatgtat ccgggcatcc tgatctgcag cgcttcggaa ctgacaggac tggcgacgga
    16681 ctcgacgacg gcagtggcat acctgcgcgg agatgtcagc catgagaagc gcaacggcgg
    16741 caagttgcgc gaccgcagta cggtactggg cgacatcatc acctccaccc cggccctgag
    16801 ctcgccgctg gatgactacg gtttccgccg cctgccaggc tcgatgggca ccagttatgc
    16861 cgactacatg gtcaccaagc gcaatgacca caggtatatg gtctatgccg ctgccaacga
    16921 cggcatgctg cacgccttcg atggcggcat gggggccgac ggggagatgg atggtgaagg
    16981 tggcaaggag ctgtttgcgt acattccgtc cacgtcgttg ggccacatgg gcaacctgct
    17041 gctgcccaac gaccccacca accagaacgt ccagcgcttc cagcatcgct actacgtcga
    17101 tggcccggtg acggtcagcg atacctatgg cagcaacggc tggaccacct cgctggtagg
    17161 cacggccgga gctggcgggc gcagcgtgtt cgcactggat gtgtccgatc ctgcccagtt
    17221 cggcggttcc ggctcgctgc tgtgggagat cagcgatctc aacgccgcac tggatgaaga
    17281 ggtgcgcgcc aacatcggcc acgtgctggg caagccggtg atcgtgccga tgaagaacgc
    17341 cgacggttct gtgggcttcc gcgcgatatt tggcaacggc tatgaaagca ggagtggcaa
    17401 ggccgtgttg ttcgttgtcg acatgctggc cagcagcacg ccgaccatcc gcatgatcga
    17461 ggcggtcgag tcgggtcaga acctgcctgc cggcaataat ggcctgggca atatcgtcgt
    17521 ggtcgatcgc tggggtggga cgagccagaa cgaccgggtg cgcgacggcc tggccgatac
    17581 cgtctacgct gctgacaagc ggggtgcgat ctggaaattc gacctgcgcg atgatgcagc
    17641 accgacggcg ccgctgttca ccaccgatac ccatgtcgat cgcagcgacc agcggaccta
    17701 ccgccagccg attaccggtg gcatgacggt gaccacgggg gcctccggtg gtgtgatgct
    17761 gatcttcggc accggcagct tctcctacta cggcgatgag aacgacgcgg cggtgcaggc
    17821 gctgtatggc atcaacgaca ccgaagtcgg gcagcccgga acgacgctga cctcagccaa
    17881 cctgcgtccg ttcacggcac agttcgacga tggcatgcgc accctttcgc cagggactgc
    17941 tccggcgcag agccgtggct ggactgtgac gctgtcaggc aaggagcgtg cggtgggcaa
    18001 tccgcgcatt gtttcgggtg tggtgttcat gccgacctac attccttcag agtcccaggg
    18061 ctgttcggtg gatggtgcga actgggtgtt cggcctgcag gccagcagtg gcgaggcggc
    18121 gatgtcacag gtgcgctttg gtgctcccga tggcgcgtcg cccggcgcag gcacggctgg
    18181 cgtgcccttg agtacgggcg gcaacgcgcc ggtacgcgat gtcaccacct cggtggtgcc
    18241 gcggctggcg ccgccggacc cgggcaagcc tggcagcccg ccgccgaaac cgccgggcaa
    18301 tgcctgcatg atgcagattt cggtggctgg cgcggagccg atgtacctgc cgtatccctg
    18361 cggtcgccag tcgtggaggc agatccagtg atcgacgttc cttctttgcc ggcaccagga
    18421 gccaccgcaa tgcgtacacc gtgcatggcg ggccgcctgg cccgcggttt cagcctgatc
    18481 gagctgatga tcgtggtggc ggtcgtggcg atcctcgctg cgatcgccta tccgaactac
    18541 agcgcgcacg tgctcaagtc gcggcgtgcg caggccaagg ccgatctggt ggagtacgcg
    18601 cagctggccg agcgctacca caccatcaac aacacctatg tgggcttcac cttccccggc
    18661 ggagctgagt ccatcaactc gccgcgcgag ggcggcactg cggcctacac cctgtccatg
    18721 gagaccgggc agtcgacgtt cacgttcact gcagcggcgg ccaatgcgca gaccaaggac
    18781 aaatgtggcg acctgacgct caaccaggcc aacgtgaaga cgtcgcaggc aacactgtcc
    18841 gactgctggt gacgcgagcg ggaagctgcc tgcagggctg cgtgaaagag tgttgcactc
    18901 tctgttcgag gtgattacaa tgcgcctccc cgcccgaata gctcagccgg ttagagcact
    18961 tgactgttaa tcagggggtc gttggttcga gtccaacttc gggcgccaag cattacgcat
    19021 caaaggcttg cggttatccg caggcctttt ttgttgtcag cagggtgggc cgtcctggct
    19081 gcgggtcgag cggattctgc cgctgttgct gacgatgacc cgggcacgct cccggtcgtc
    19141 cgcgcagatg cgcagcgtca ggttcgcacc ggggctgcgg ccatccggct ggaagtagat
    19201 ctgcggccgg ccgctgctgc tggccgcgct gatcctgacg ctggacaggc cggactggtg
    19261 cagcaggatg gagtcgatgg aggagggggg ctctcgccgg ccgttggtcc tgtacacgat
    19321 ccagccctgg ctccaatcgt cgccgcagtg gtgcccatcg gggcttgcgc acaggccgat
    19381 cagcgcactg cgcatgatgg cctggtagcg cgcggtggcc agaccggact gcaggctgag
    19441 gcgagtggat tccgaccgtt gatgcagcat cagttcccgc agcgcgggcc agccggctgc
    19501 cagcaggacg gcaaggaccg ccaccaccac cagtagttcg agcagatgca tgccgtgctg
    19561 tgtgtcgggg ctggaagcag gagggaggcg catgcatcca gcctcgctgc ctcgcaggga
    19621 ctgcaccatc aggtagcgcc gcgctcggct gcccggaaac ccctcagccg gccgtcactc
    19681 ctggccccgt atactcacct ttcccgggaa ctggcaacac catgagcgac cgttttgaac
    19741 tcgtctcgcc gtactcgccg gcgggcgacc agcccgatgc catcgcgaag ctgaccagca
    19801 acttcgaagc gggcatcgcc aagcagaccc tgctgggcgt caccggctcg ggcaagacct
    19861 acaccatcgc caacgtcatc cagaacgtgc agaagccgac gctgatcatg gcgccgaaca
    19921 agacgctggc ggcgcagctg tatggcgagt tcaaggcgtt cttcccgcac aacgcggtgg
    19981 agtacttcgt cagctactac gattactacc agccggaagc ctatgtgccg tcgtcggaca
    20041 ccttcatcga gaaggacagt tcgatcaacg agcacatcga gcagatgcgc ctggccgcga
    20101 ccaagaccct gctgtcgcgc ccagatgcga tcgtggtggc gaccgtatcg gcgatctatg
    20161 gcctgggtgc ccccgaggat tacctgtcgc tgcgcctgat cctgtccaag ggcgagcgca
    20221 tcgaccagcg cgacctgatc aatcacctga cccagctgca gtacacgcgc aacgagtacg
    20281 aactgcagcg cggtacgttc cgcgtgcgcg gcgaagtgat cgatgtgttc ccggccgagt
    20341 cggacagcga ggcgctgcgc ctggagctgt tcgatggcga ggtcgagaag atcaccctgt
    20401 tcgacccgct caccggcgag acgctgcgca acatgcagcg cttcaccgtg tacccgaaga
    20461 cccactacgc gaccacccgc gagcgtgtgc tggcggcggt ggacaccatc aaggtcgagt
    20521 tgaaggagcg gctggagcag ctgtacgcgg agaacaagct ggtcgaggcg cagcgcctgg
    20581 cccagcgcac ccagttcgac atcgaaatga tggccgaggt cggcttctgc aacggcatcg
    20641 agaactactc gcgccacctc accggcaaga atgccggcga gccgccgccg accctgttcg
    20701 actacctgcc gcccgacgcg ctgctggtga tcgacgaatc gcacgtgacc attccgcaga
    20761 tcggcgcgat gttcaagggc gatcgctcgc gcaaggagac cctggtcgaa ttcggcttcc
    20821 gcctgccatc ggcgctggac aatcgtccgc tgcgcttcga ggagtgggag gagcgctgcc
    20881 cacgtgcgat ctacgtgtcg gctacgcccg gcccctatga atatcgtgaa gcgggtgacg
    20941 agatcaccga actggtggtg cgcccgaccg gcctgatcga tccggtggtg gaaatccgtc
    21001 cggtcggtac ccaggtcgat gacctgatga gcgaggccaa cgagcgcatc aaggccggcg
    21061 accgcgtgct ggtcaccacg ctgaccaagc gcatggcgga gaacctcacc gaatacctca
    21121 ccgagcatgg catccgcgtg cgctacctgc attcggacgt ggacacggtc gagcgcgtgg
    21181 agatcatccg cgacctgcgc ctgggcaagt tcgacgtgct ggtcggcatc aacctgctgc
    21241 gcgaaggcct ggatatgccc gaggtgtcgc tggtggcgat cctggatgcc gacaaggagg
    21301 gcttcctgcg ctcgacgggt tcgttgatcc agaccatcgg ccgtgcggcg cgcaacgtgc
    21361 gcggcaaggc gatcctctat gccgacaagg tcacccgttc gatgcaggcg gcgatcgacg
    21421 agaccgaccg ccgccgcgcc aagcaggtcg agtacaacga ggaacacggc atcgtgccgc
    21481 gctcggtggc acggccgatc gtcgacgtgc tggaaggcgc ccggtccgat gcagcggaga
    21541 aagaagccaa gaagggcaag ggcaagagcc gggcaggcgt ggcagaggaa ggggccgact
    21601 accggtcgct cagcccggcc cagctggcca cccggctcaa ggcgctggaa cagcagatgt
    21661 accagcatgc caaggacctg gagttcgagg atgcggcacg cgtgcgcgac cagatccggc
    21721 agctgaagga agccagcctg ggctgaacac ggcaggcagc cgcatcttca caaaagtgtt
    21781 gcgcttcacg gctggcatcc gtaatatacg cggcctgcac cgacgcaatc gcggaaatgc
    21841 agaagcaaaa cgggcggtta gctcagcggt agagcactac cttgacatgg taggggtcac
    21901 aggttcgaac cctgtaccgc ccaccacgaa gtccctgcaa aggggctgtc gtgaactgca
    21961 aagcccggcc ctggcgccgg gtttttacgt agcaaggcca gctttcgggc ggcaagaaca
    22021 agatgggcgg ttagctcagc ggtagagcac taccttgaca tggtaggggt cacaggttcg
    22081 aaccctgtac cgcccaccac ctggctcctg gtatgaccgg tgcagcggtg gatcacgatg
    22141 aaagccggcc ttgggtcggc ttttttcgtt tgtgctggca gcctcgccgc gcatcagcgc
    22201 tgcgcgaccc attcgtcgat gctgatcatg cgctgcagct tccagtggcc ctcgacgcgt
    22261 tcccagacct gcgcgtagcg cgccggcctg gaccgttgct gctggccgtc tgcggccaga
    22321 ggctggtagc caacacgcag tacgcggtcc tggcgcagcc ggtacagctg cagggtggcc
    22381 ggatcccgtg ccgccggagc gcccgcgtgc ccggcatcgg cctgcaggat ctggcggcgc
    22441 agggagacat ccccggcatc ggcatcgcgg ccgaacaagc cagcgcacaa cagcagcagg
    22501 gcaagcatcg gcatggcacg gtgctccgga gaagggagtc cagcgtggca ctgcctcctg
    22561 tgcggtgaaa ccggtatgcg acgaaagccg gtaaagcgtg cgtcaagcgg gtccggggag
    22621 gatgaatccg gggtggggtg gccagtaccc cgtggccctg ccaccgccgc ggggccggaa
    22681 cagcatcgcg gcggtggcaa cgggtcagag aacccgggct tcggaacgga tgggattaca
    22741 gcggatcaca gcacagcacc tggcccggct tgccggaatt gccgaacgga cagctcgggt
    22801 gcggttcgca gcccggcgcg tagccggtct tgggcgcgac ggcgaaggcc tgggcggcgc
    22861 cgaaggccat ggccgcgaca acgacgatac cggcgacgga cgaaaggact ttctttccga
    22921 tcatgtgtat ctccttggtt ggcgttgtgg tgttgcagtt gccgaaggca cgtgagtgcc
    22981 agtggtggcg cgggagtaat gacgaggtat cggagtctgt ctggtcaggg cagggcgagg
    23041 tccggcgcca acgacgtcat ggcggcatgt acgacctgct catcaagctg gccgacatgc
    23101 ttgtaggcca cactgccgtc gttacccagc acgatcagca tcggcgtgac cgttgcgcga
    23161 tagcgcttcg atgcatcgcc tccgctgtcg atggcgatcg ggaagcgcag atcgtgcctg
    23221 ccggcgtagc tggccagttc atcgtaggga ggaaggccca cgccgatcag ttcactggcg
    23281 ccccgtgcag cggcaatctt ccgcacatgt ggcatcgagg ccaggcagta gcggcaggcc
    23341 gtggagaaga aatagaggat ctgcgggctg gcgcgtgggc caccaatctg cacgcgggcc
    23401 tgctgcgtgg tcgccagtgc aagcggggcg gcgaggctgc caagtgccag gccgtgcgct
    23461 tcaagccgca tgtcctgcag ctgcgaggcc atctgttgat tgatctgccg cagctggcgg
    23521 ttctgccatc ccagcgcgac gatcagcgcc gacagcaaca gggccacaac ggggaacagg
    23581 acgcgcttga tcatcgatca tccttgaacg cagcgttggg ccgaacatac cggaactggc
    23641 gcacaggttg ttaagccgat gttcgccagg cgcgcatggg tgctgcgcct gtactagagt
    23701 ggcacccgcg caggcatgcg cgcctgcctt cccctcatta ccagaaggat ttcccgatga
    23761 gcgatcatgt cccggtgtcc cggcccaatc cagtgcttga actgctgttc ggcggcaaca
    23821 tgctggaggg cacgttcaag gcggtggtct gggtggccct gctggctgca gtcctggcct
    23881 ggacgacctt ccgctgagtc cttgcgcggc gctgcagcac cggttgcagg cgccgttgct
    23941 accatgcgct caggcgttga aggcctggcg caggctgcgc agggtcgcct ggcgctgttc
    24001 cttcgcgatg gcctcaccca tctccagctc ctgcaggcgc agcccgacca gggtcatcga
    24061 cagcgcgtag ccgcgcgctg catcggctac gcgcgaaagt cccagggcgc gccgcgccaa
    24121 cgcgttgacg tgttccaggt cgggcatcag gcccaggtag gcgcgctcgg cgctttccag
    24181 gtcgggagca cgcaggatcg cgtgcgcttc agcagcaggg gagacggagg ccatgggggg
    24241 tccttgtccg tagcaggcgc tcgatcagaa cgagcgcatc agggaaacga aggccgacgt
    24301 ctgtgtacca cgtcgtgcca tcgggctgtc cttcaccgca tcgccgaacc actggttggc
    24361 gaccacgcct gttgcacgcc acttggtgcc cagcggcgtg ctgaccgcga tctgcaggct
    24421 cggcgatgtc gtgctgcccg ggcggtaggc cgccaggccc gagcgcagtg cttcctcgtc
    24481 gctgatgccg tagtagtagt ccagcaggcg tgcgctggag tgcaccacgc ccacccgtgg
    24541 cacccaggtg aagcggccgg cctggatcgg atagctgtaa tgcaggcgcg attcgaaacc
    24601 accgccatgc ccggtgatct cacgcatcac gccggcctct acgatgcccc agtcggcgct
    24661 gtactcacca ttgatgccgg ccatggccga catctgccgg ctgtgcaggc ggcgcagctg
    24721 cggatcattc acgtcgtcgg tcttgaagcg cagcgtgtac ggcgtcagcg ccgccgacag
    24781 ccgcaggcct tggcccttgt acaggtacat gcccagcgag ccggggctgg cgaagaagcg
    24841 ctggccctgc caggaaatcg ccggtacgac cagcggcttg acgtcgtagt gcgcatacgc
    24901 gccggacgtc gcacctgcgg tgatgccggc ctgcacgccg gggctgcggt cggcggcatg
    24961 cgtgatcaac ggcaggccga tgccagcgga gaacagcagg gggcgcagca gggtcgggga
    25021 cagcgacggc atcgatcagc cactttgcgg gggatggctg tgcatggtgc gggcccaaca
    25081 ttgtcagaac attgcgcctg ggcaatcggc acgcaatgac gcccaaggca ggcgccaggc
    25141 actatgatcg gcaccgtttc cggcagccga gtccctgatg cgcatccttc tggtcgaaga
    25201 cgatcctgac ctgtcccgtg ccctgcaatc gggcctggag cggcagggcg tggtggccga
    25261 cgtggtcggc agcctggccg aggcggccat cgcgctgcgc gatccggtgc accagttgat
    25321 gctgctcgac cgccagcttc ccgatggtga cggcgccggt tttgtcgcta ccgcgcgtgc
    25381 actgcgcccg aacctggcgg tgatcatgct gacggccaag ggcacgctgt cggacaaggt
    25441 cgaagggctg gacgtcggtg ccgatgacta cctggtcaag ccggtggcga tcgaggaact
    25501 gatggcgcgc atccgtgcgg tgtcgcggcg gccttccgcg atggtgacac cgagcctgcg
    25561 gctgggacgg ctcgagttcg acttcgaatc gctgcaggca caggtggaag gccagccgtt
    25621 ggcgctgccg cgccggcagg tgctggtgct gcaggcgctg gcgatgcggc aggggcgcac
    25681 ggtcacccgc agtgcgctgg aagcggcggt atacggcttc gacgatgaga tccagtccaa
    25741 tgcgctcgat gcgcacattt ccaagctgcg caaggcgctt cagcaggccg gggcgggcgt
    25801 ggagatccac gtgatccggg gcgtcggcta cctgctggcg gaggcctgag atggcgcgtc
    25861 cgatccgttc catcacgctc ggcctggcct ggcgcctgtt cctcgcgcag gcattcaccg
    25921 tgctgttcgc ggtggttgcg ttgatcctga cctggggtga caaggactcc tggggcatgg
    25981 acatgttcat ggccgaggcg gtggccaagg ccgtgcacag tgagggcggc cggttggtgc
    26041 tggatgaagc gcgctggcgc aggctggacg cggatgcggg aggcaatctc tggttcgcgg
    26101 cggtcgatga caagggcatc tggctggaac gcggcacgat tccggccatc cacgcgccgt
    26161 tgctggcgcg gttgccgacg ctgggtgcca ccgaactcgg ttcgctggtg ccgccctacc
    26221 tggatgtggc cagggtcatg atccgcaacg aggatggccg acgcatcacg gtgatggtgg
    26281 ggggcgcacc gaagggcggg ctgctggatg gcgcactgat ggtgttgcgc ctgattggct
    26341 tgtggttttt cctgccgctg atcgtggtca cgctgctggt gatgccgacg gtgatccacc
    26401 gcgcgatgcg cggtgtgcgg cgttccgcgc agcaggccaa ggagctggat atcggccagc
    26461 cgggcgcgcg gctggatgcg cagctggtgt cgaccgaggt tgcgccgctg gtggaagcgt
    26521 tcaacgatgc gatcgacaag gtgcagcagg gctacgcggc gcgcgacaag ttcctcgccg
    26581 atgccgcaca cgagctgcgc gtgccgatcg cggtggtgca ggcgcgcctg tcacagctgc
    26641 cgcagggcga actcaagtcg cagctgctca ccgacgtcgc ccgcctcggc aacgtggccg
    26701 agcatctgct cgacctgcag cggctcgacc gcaatgtcgg tgcgctgcaa cggctggacc
    26761 tggcgctgct ggtgcgcgaa gccgctgccg agctggcgcc gctggtggta ggggcgggct
    26821 atggcttcga ggtggatgcg ccggacgcgc cggtgtggat ccacggcgac agcctggcgc
    26881 tggggcgggt gatcgccaac ctggtgcaca acgccatcgt ccacggtggc gggcgcggca
    26941 ccatctgcgt gcgcctggat gagcgcggac tgctggaagt cagcgaccag ggcgccggca
    27001 ttccggtcaa tgatcgcgag gcgatcttcg agccgttcca ccggctgcgc gcggctggca
    27061 gtggcagtgg gctgggcctg catctggtga aggagatcgt gcagcaccac ggcggctcgg
    27121 tcagtgtcgg cgaagcggcc ggcggtggcg ccagcttccg ggtcaatttc catcgcggca
    27181 ccgttcggcg ctgacagccg cgcggggcat tgcccgatag gcaggccgtc gtgatcgatt
    27241 gcaggctgca cggatggttc ccgaacgatc cgccccaccc ctgttcggcg ggggcagtgc
    27301 cgcagggctg gtgctgggcg cgctggcctg catgcagctg ccggtgctgc tgccgctgtg
    27361 gctgtgcgcg ccgttggcgg tcgccgctgg cgcctgctgg ctggcgcgct ggcgtggccg
    27421 gggctgggcg atggccgtgt tcgggctggc atgggcgacg ctgcacgggc attgggcgct
    27481 gcaccggcag atgcctcccg ctgcgccggc gcaggatgtg cgggtgcagg gacgcgtggt
    27541 cgagcttcca cacagcgggc ccggttacac gcgtttcgta ctgcgtgtgg acgaggccgg
    27601 ggcgctgccg tcgctgcgtg gtacgcgcct gcaggtgacc tggagcgatc cgtggcgcgg
    27661 gcctgcaagc gctggcagcg ggggcgggcg ccatgcggtt cgcgccgggg cgcactggga
    27721 cctctcactg cgcctgaggg cgccgcgttc acggatcaat ccgggcggct tcgatgccga
    27781 gcggcatgcc ttgcagcggg gcatttccgg caatggcacg gtccgtgatc cggcaagcgc
    27841 acgtgagcgg ctgcccgcac ggggcctgca ggcctggcgt gaacgcagca gcgccgcgat
    27901 tgccacgcag gtggcgcatc cggctgcacg gttcgtgcag gcgctggcac tgggcgacac
    27961 ccgtggcgtg tccgatgccg attgggagca cctgcgcgcg ctgggcctga cccatctggt
    28021 cgccatttcc ggattccacg tgggcgtggt ggctggattc ggtgcgctgt tgtgccgcgt
    28081 gtcgtggtgg ttgtggccag cgctggggcg ggtccggcca cggccgcagg ccgccgcgtg
    28141 gggcgccgca ctggctgcgg ccgcctatgc cgttgcggcc ggtggcgcgc tgccgaccgt
    28201 gcgcgcggcg ctgatgatcg gcctggttgc gctggcccgg gccggacgcc gcccggttgc
    28261 cgcagggcag gggctggcgc tggctgcgat ggtgatggtg ctgccggcgc cgatgtcggt
    28321 cctgtcagca gggttctggt tgagctttgg cggggtgctg tggctgttgt ggtgcctgcc
    28381 gcgcaccgcg ccggaggggg ttggcggtgg cctgcgcggt ttcctggcgg cgcagggagt
    28441 ggcgagcgtg ggcctgctgc ccctgtgcgt ggccttgttc ggtggcaccg cgcggttggg
    28501 gccgctggtc aatctgccga tcatcccgtg gtggacgttg ctggtggtgc cgatgtcgct
    28561 gttggggacc gctcttcacg ccctgcacga cggcgccgga ggatgggcat ggcgtgccgc
    28621 cgccgggttg ttcgaggtca gctggcaggc cctgcagccg ctggcgctgc acccgagggc
    28681 gatgtggtgg ctggccgagg cgccgggctg ggcggtgccg gcggcgttgc tgggggtgtt
    28741 ctggtggctg ctgccgcgcg gggccggcgg tggcctggtg gggctgttgc tgtgcctgcc
    28801 actgctgtgg ccggcgcgcg gggcacccgc gcagggtgag ctggaactgc tggtgcacga
    28861 tgtcggccag ggcacggcgg tgctggtgcg cacggcgcgg cacgcgctct ggtatgacgt
    28921 cgggccgccg accggcgccg acggcaatga acggatcctg atcccggccc tgcgcgcgct
    28981 gggccagggg ccgcccgagc aggtgatgct cagccatgac catctggacc acatcggcag
    29041 cctgcccagc ctgcggcgtc agctgcccgg gctgcatgcg ctggcaccgc ccggcagcgc
    29101 gattgccggg gccaggccct gccggcaggg aatgcgctgg cagtgggacg gtgtcgactt
    29161 ccaggtattg cacccggcgc cgggcagccg gcagggcggc aacgaagaca gctgcgtgct
    29221 gcgcatcgcc agccgccacg gcgttgttct gctgcccggt gacatcggcc gttcggcgga
    29281 gcgggcgctg ctgcaggctt ggccgaccgc gttgaaggcc gacgtggtgc tggtgccgca
    29341 ccatggcagc ggcggcagct ccagcgcggg atgggtggcg gcggtggcac cgcggctggc
    29401 gctggtttcg gccgggcacc agaaccgctt cgggcacccg cgccaggagg tggtccagcg
    29461 ctggcaggcg cagggggccg aggtgctggc gaccgccgac gccggggcga tccgcgtatg
    29521 gcttggtgcg caagggctgc agctgcgtga acagcgtgtc cacgcatccc gttggtggga
    29581 tgccgctggg cgggcgcggt cggctgctat cctatcgtcg attgaacaag cggccgttgg
    29641 gccggagggt tgaaacgtgt gggaactggt caaggccggt ggctggccga tggtgccgct
    29701 gctgctgttg ggcgtactgg ctttggcgat catcctggag cgtttctggt ccctgcggcg
    29761 gacggaagtg ctgccgcccg gcctcggcca ggaagtgcgc aactgggccg cgcgcggcaa
    29821 gcttgatccg gcccatctgc agaccctgcg tgccaactcg ccgctgggcg cgctgctggc
    29881 cgccgcgctg gaagcgcgca atcgcccgcg tgaccagatc cgcgagcgca tcgaggacac
    29941 cggccgccac ctggtgcacc gcatggaacg tttcctcaac gcactgggca ccatcgcctc
    30001 ggcgggcccg ttgctgggcc tgctcggcac ggtgatcggc atgatccaga tgttcctggg
    30061 catcctcgac cacggcgtgg gtgacgtgaa ccagctggcc ggtggcatcg gcaaggccct
    30121 ggtctgcacc gccaccggca tgatcgtggc gatcccggcg ctgatgttcc atcgctactt
    30181 caagggccgc atccacggct acgtggtgga gatggagcag gaagccagcg cattgctgga
    30241 tacgctcgac ggtcgccccg gagtgatgaa cccggccgcg gcggtgcgtt cgtccaacgc
    30301 tgccacggcg aaggcctgat cgatgcgtat cggcaacgac cggtcccagg atgagccgca
    30361 tatcgacctg gtgccactga tcgacgtcat cctggtgctg atcatcttct ttgtggtcac
    30421 caccacgttc gatgcgcgtt cgacgctgca ggtgcagctg ccgaccgcca gccagcagca
    30481 gaccaacgag ccgccgcgct cgctcagcgt gctgatcaac gccgagggcc gctatttcat
    30541 caatgaccag gaagtgctgc gcagcgacgt cgagtcggtc aagcagacca ttgccgccgt
    30601 ggcgggcagt gatcgcgagc agaccgtgct gctgcgcgcc gatgcacgca ctccctacca
    30661 ggccgtggtg accgcgcagg atgcgctggg ccagctcggc ttccgccgta ttgccattgc
    30721 aacagcaccc gaggtgcgtc catgagttcc aaacacgcgc cggtgtggcc gatctacaag
    30781 cgtctgctgg gatatacccg tgcctactgg gtcctgatgg tcgccgctgt catcgccatg
    30841 gcggtggagt cggtggccgg gtacttcttc accaagctga tggagccgct ggtcaaccgc
    30901 ggcttcgtca atcccgagcc aaggatggcg gtgatcctgc cgttgaccat cctcggcctg
    30961 ttcctgatgc gcagtgccgc cacctgggtc agcgactacg cactggccaa gaccggccgc
    31021 agcgtggtgc gcgacctgcg tgagcaggta ctggccaagt acctgcacct gccgtcctcg
    31081 cacttcgata ccgaatcgac cccggtgatg gtcagccgcc tgaatttcga caccgagcag
    31141 gtcacccagg ccagcgccga tgcgctcaag accgtggtcg ccgataccct gaccatcatc
    31201 gcgatgctgg cggtgatgct gcagatgagc gtcaaggtca ccgtggcgat gctggtggtg
    31261 gtgccgatga tcggcgtgat cgtgtcctac gtcggcaagc gctaccggcg tatcagccgc
    31321 ggcatccagg acggcatggg cacgatggcg cagaccgccg agcagtcgct ggccgcgcag
    31381 caggaagtga aggtgcacgg cacccagcag catgagatgt cgcgttactc gcgcctggcc
    31441 aaccgcatgc tggcactgaa catgaaggtg gaaatcaccc gtgccggcgc gtccagcgtg
    31501 gtccagttcc tggccgcgct ggcgctggcg gtgatcgtct gggtgtcgac ccgcgaagcg
    31561 ctcgccggcc gtctgaacgc cggccagttc atgggcctga tgatctcgat gaccgcgatc
    31621 attccctcgc tgcgccgcct gaccagcgtg cagtcctcga tctcgcgtgg cgtgtccgct
    31681 gccgagcgcc tgttcggcat cctcgacatg ccggtcgagc gcgacgaagg ccgcaacacg
    31741 gtgcagcgcg tgcagggtga actggccttc gagcacgtca tgctgcgcta ccgcgccgac
    31801 agtggcatcg cgctggatga catcagcttc gttgccaagc cgggcacggt gaccgccatc
    31861 gttggccgat ccggcagcgg caagaccagc ctgatccggc tggtaccgcg cttctacgaa
    31921 cccagtggtg ggcgcatcac cctcgacggc gtggccctgg acgactatcc gctggccgat
    31981 ctgcgccgcc aggtggcgat ggtcgggcag aaggtcatgc tgttcgacga caccatcggc
    32041 gccaacatcg cctatggcat ggacgcgacc gatgatcaga tccgcgcggc cgccgaagcg
    32101 gccaatgcgt gggaattcat cgcacgcatg ccgcagcagc tgcagacccc ggtcggcgag
    32161 aacggcgcgc tgctgtccgg cggccagcgc cagcgcctgg cgatcgcgcg cgcgattctg
    32221 cgtgatgccc cgatcctgat cctcgatgaa gccaccgccg cgctcgacaa cgaatccgag
    32281 cggctggtac aggatgcact gcagcgcctg atgcccgagc gcaccacgct ggtcatcgca
    32341 caccgcctgt caaccatcga gcatgccgac caggtgctgg tgatggacca cggtcgcatc
    32401 gttgaacgcg gcacccacaa ggagctgctg agcatgggtg gcctgtacca gcatctgcac
    32461 agcatgcagt tccgcgaaag gcaggactga tggctggcaa gggtacccag accccgccgt
    32521 actggtacga cggcagcccg gctcccttgg cgatgcgcct gctggcgccg ctgtacgccg
    32581 gtgtcaccgc gctgcgccgg cgtgcctatc ggcgcggctg gcgcaagcac tacacgttgc
    32641 cggtgccggt catcgtggtc ggcaacatca ccgcaggcgg caccggcaag acgccgttga
    32701 ccatcgccct ggtcgagcgc cttcgtgccg ccggctggaa gccgggtgtg gccagccgcg
    32761 gctatggccg cgaggatgcg gacaagccac tgtgggtaca ggccgacacg ccgaccgcca
    32821 agggcggcga cgagccggtg ctgatcgcgt ggaagaccgg cgtgccggtg cgcgtggatc
    32881 gtgatcgcgt tgccgctggc aaggcgctga tcgaggccgg ctgcgatgtg atcgtctgcg
    32941 acgatggcct gcagcactac cggttggcac gcgacatcga aattgaagtg gtcgatgccc
    33001 agcgccgcta cggcaatggc cggatgattc cggccggacc gctgcgtgag ccggtcagcc
    33061 gcgctaccga gtgcgacttc cgggtggtca acctcggcca ggccgatgag gatgccgcag
    33121 cccaggcctg tggattcggc cagtggccga tggccctgca catcgacagt gcgcagccgc
    33181 tggccggtgg ccgtgcgcgc ccgctgtcgt atttcaaggg ccagcgtgtg cacgcggtgg
    33241 ccggcatcgc ccatccgcag cgcttcttcg acatgctgcg ggcgcgtggc atcggcgtgg
    33301 tgccgcatgc ctttgccgac catcaggcgt atcagccgca ggacctgtcc ttcggcagcc
    33361 agctgccggt gctgatgacc gagaaggacg cggtgaagtg ccgtcagttc ggcaacgact
    33421 ggcattatgc cgtcccgctg cgcgccgagc tgccagctgc gttctgggtg gcgctgaccg
    33481 atcgcctgga caagctgaga ccgaactgag tggcgcggcg gcgcttgcat tcagctgccg
    33541 ccggccgcat tcctgttgca acgagcctgc cgagtaccgc ccgcatgacc gaattcgtcg
    33601 tcgccatccc ggcccgctat gccgcatcgc ggctgccggg caagccgctg cgcctgctgg
    33661 gcggtgagcc gctggtcctg cacgtggcgc gccgcgcgct gcaggcgggc gctggcgagg
    33721 tctgggtcgc caccgacgac cagcgcatcg ccgacacgct gtccgggctg gctgaagtga
    33781 aggtggcgat gaccgcaaca tcgcacgcgt ccggcaccga ccgtctggcc gagtgcgcgc
    33841 gcattgccgg ctgggccgat gacaccgtgg tggtgaacct gcagggcgat gaaccgttcg
    33901 cgcctgcggc cggtatccgc gcagtggccg acgcgctggt cggcggcaat gcgccgatgt
    33961 cgaccctggc caccaccgtc gaggacgcgc acaccctgtt cgacccgaac gtggtcaagc
    34021 tggtgcgcaa cgtgcgcaac gaggcgatgt acttcagccg tgcgccgatc gcctggcacc
    34081 gtgatggctt cgcccgcagc cgcgacaccc tgccggaagg ccatgcctgg ctgcgccata
    34141 tcggcatcta tggctatcgc gccggcttcc tgcagcagtt cgcggcgatg ccgccgggcc
    34201 agctggagca ggtcgagtcg ctggaacagc tgcgggtgct ggaagccggc tatccgatca
    34261 gcgtggcgat ctcgcccgag ccgttcccgc cgggcatcga tacgcccgaa gacctcgagc
    34321 gcgccgaagc gctgctgcag gcaatggccg cgcgatgaga ctgctggtcg tctgcctcgg
    34381 caacatctgc cgttcgccga tggccgaagg tgcgctgcgc gcacgcctgg acgcctcgcc
    34441 gctggccggg cgggtgcagg tcgattcggc cggtaccggt gactggcacg tcggtgagcc
    34501 accggaccgg cgcgcgatcg cctgcgcggc cgggcacggc gtggacatcg gtggcctgcg
    34561 cgcgcgccag ctgcaggccg tggatttcga ccgtttcgac tggatcctgt gcgccgacga
    34621 agccaatctg cgtgatgccg gtcgcctggc tgcacccgcc cagcgcgagc agctggcgct
    34681 gtacctgccg tggtcgggcg ggaaggggcg ggtggcgatc ccggatccct acaccggtgg
    34741 caacgatcac ttcgagcagg tctggacgct ggtcgacact gctgcggaac gtgtcgtggc
    34801 acgactgttg catgacgccg actccggcat aatcgggcca tgaacgtcca gcccgtcccg
    34861 gacctgcccg agttcgccac ttggctcaat gccaccccct gcaccctgac cgaactgcgc
    34921 ggtcggccgg tggcgctgct gttcgtcaac gccgcctccg cctggagcgc gcagcggctg
    34981 gccgaattcg gccagtggct gtcacgccac ccgggcaagt tgcagccgct ggtgcttcag
    35041 gtgccgcgct ttgatttcga gcgcgacccg ggtaccgcat tgaagctgct gcgccggcag
    35101 ggcctgacga tgccggtgct gctggatgcc gactgggatg gctggcgtcg ctttggcgtc
    35161 agcgcctggc caacgatggt gctgctggac gcgcagggcc gcgagcagca acggctggtc
    35221 gggcagggcg cgcccggcga gcttgagcgc gccttgaatg cgctgtgcca gggcgcccct
    35281 tcggcgccgc cgcggggagg cagcgaactg catccggaga cgcgccaggc cctgcgtttt
    35341 ccgttggggc tggccgtcag caccgagcgc ctgtacatcg ccgacagcgg ccatcaccgc
    35401 atcctcgaat gcagtcatgg cggccgcatc ctgcgccagt tcgggctggg caccgccgat
    35461 ttcatggatg gcaaccttgc cgaggcggcg ttccatcgcc cgcaggcgct ggtccttgaa
    35521 cgcgacgcgc tgtacgtggc tgataccggc aaccatgcgg tgcgacgcat caacctgctc
    35581 accggcatcg tcgacacgct gtgtggcaac ggccgccccg gcgcgccggt ggagggcccg
    35641 gttgcgcagg cgcggcaggt atcgctggac catccgatcg gcctggccat cgccgacaac
    35701 cagctgcata tcgccatggc cggcgacaac cgcatctgga gctatcacct gggccagcgc
    35761 agcctgcagt ggcgcgccgg cagtggtgcc atcgacgagc gcgacggcag tggccacctg
    35821 gccgccttcg cccagcccag cgcgctggcg gtggtgcagc aggtgctgta cgtggccgac
    35881 gcgctggggt cctcgatccg tgcgctgcag ttgcgcggcg acctggtgca gacgctggtc
    35941 gggcaagggc cctggcgctt cggcaatgag gatggaccgc gcgcgcaggc ccgcctgcag
    36001 ttcccgcagg cgattgcctt gagtccggac gctccgctgc tgtggatcgc cgactccggc
    36061 aatggccgtc tgcgcacgct tcgcctgggc ggcggcgaac tcaccaccca gccgctgccg
    36121 cgtcgcctgc agggcccggc cgggctggcg gtgggcgccg gcgcggtgtg gatcgccgag
    36181 accgatgccc acgccgtgct gcgcctggac cctgaaagtg gcgtgctcag cgaagtaccg
    36241 atcagcgaat gaccgacgtt cccgccccgg cctttgatgg caaggccttc gcggcccatc
    36301 tcagcaccgc acccggcgtg taccgcatgt acgcggccga cgacaccttg ctgtacgtgg
    36361 gcaaggcgcg tgcactgcgc aaccgcgtcg gcagctattt caatggcagc ccgaagaacg
    36421 cgcggatcat gtcgatgatc tcgcagatcg cgcgcatgga cgtcactgtc acgcgctcgg
    36481 aagccgaggc gctcctgctg gaaaaccagc tgatcaagtc gttgtcgccg cgctacaacg
    36541 tttccttgcg cgacgacaag acctacccgc atgtgctgct gacccgcgag gactggccgc
    36601 gcatcgcgct gcatcgcggc ccgcgtgcca ttcccggccg ctatttcggg ccgtacccgg
    36661 gtgtcactgc ggtacgcgag acgctcaacc tgatgcacaa gctgttcaag ctgcgcagct
    36721 gcgaagacag cgtgttccgc aatcgttcgc gaccgtgcct gcagtaccag atcggtcgct
    36781 gcagcgcacc ctgcgtggag ctggtggcgc ccagcgaata tgccgagtcg gtgcgtcgtg
    36841 ccgcgctgtt cctggaaggc aagagcgatg agttgacccg cgagctgggc gagcagatgc
    36901 aggtggccag cgaggcgttg gaattcgaac aggccgcacg cctgcgcgac ctgatttcct
    36961 cactgcgcag catgcagacc cgtcagtacg tggatggccg cgccgccgac ctggacgtgc
    37021 tggcggtggc catgcagggc tcgcaggcct gtgtgctgct gctggcgttc cgtgatgggc
    37081 gcaacctggg cacccgtccg ttcttcccgc gcaccaatgg cgaggaaagc cccgaggaag
    37141 tgctggccgc gttcgtctcg cagtactaca tcgaattcga gccgccgcgc gagatcctgc
    37201 tggatcgcga gattcccgat gccgacctgc tggtcgccgc gctgtcggcc tcggccgaac
    37261 gcaaggtgca gctgaagtgg aacgtgcgtg gcgagcgtgc cggctacgtc gaacttgcca
    37321 gccgcaacgc gcagctgacc ctggccaccg aactcaacag ccgcaacgcg cagcacgcgc
    37381 gcagcgacgc gctgcgcgac atgctgggcc tggccgagcc ggtcaagcgg gtcgagtgct
    37441 tcgacatcag tcataccctc ggcgaagcca ccgtggcctc ctgcgtggtg ttcgatgctg
    37501 ctggcccggt gcgcgcgcag taccgccgct tcaacatcag cggtatcgag ccgggcgatg
    37561 actacgccgc catgcgccag gccatcgacc gccgcttccg ccgtgccgtg gaagagcagg
    37621 gcgtgctgcc ggacgtactg ctgatcgacg gtggcgccgg ccagttggct caggcccagg
    37681 ccgcactggc cgacctcggc gtggaaggcg tgctgctggt gggcgtggcc aagggcgtgg
    37741 agcgccgcgc cggccatgaa gcgctggtga tgcccgacgg ccgcgaactg cgcccgggcg
    37801 cggccaatcc ggcgctgcag ttcatccagc aggtgcgcga cgaggcgcac cgcttcgcca
    37861 tcaccggcca ccgcggccgc cggcagaaag cgcggatgac cagcaagctg gaagacatcc
    37921 ccggcatcgg gccgcgccgc cgtgccagcc tgctcaagca tttcggtggc cttgtcggcc
    37981 tgaaagccgc cggcgaagcg gaaatcgcca aggtagaagg catcaatgac gccctcgcgg
    38041 cgcgtatcta cgctaacctg cacgggttgg ccacgcccga tgcggccgag tagagagaga
    38101 agcacgcacg ccatgaagtt gaccctcccc acctggctga cgttgttgcg gatcgtgatg
    38161 atcccggtgc tggtgctggt gttctacctg ccctacacct ggaccaactt cgcttcggcg
    38221 gcgatcttcg gcctggccgc gatcaccgac tggctcgatg gctggattgc ccgccgctac
    38281 cagctggaat cggcgttcgg cgcgttcctc gacccggtcg cggacaagct gatggtggcg
    38341 gtggcgctgt tcctgatcgt gcagggccac ccgacgccgt ggatggcgtt ctgggcggcg
    38401 gtgatcgtcg gccgtgagat cgcggtgtcg gcgctgcgcg agtggatggc ggagctgggc
    38461 cagcgtgcca aggtgcgcgt ggcgatgatc ggcaaggtca agaccaccgc gcagatggtc
    38521 gcgctgctgt gcctgctcta ttcggtggca ccgaacgtgc cagtggaaga catctggatg
    38581 ggctggccgg tgttccacat cggcgactgg accctggcga ttgcggcggt gctgacgctg
    38641 tggtcgggcc tgcagtacct gcacgccgcc tggccaagcc tgcgcgaaga cgaacgcgcc
    38701 gcacgcgaac gttcgcgcca gaagaagctg ggcaacggtt gatcgggcgc gacatccacg
    38761 catggcgtgg atctactgga aatgctgcat ccatgccagg cgtggatacg cactgccagg
    38821 tgcctcgcat acgccaaaaa aaccgcttga cgccattcct ggaacaggta gaatttcgcc
    38881 tcccaagcgg gaatagctca gttggtagag cgcaaccttg ccaaggttga ggtcgcgagt
    38941 tcgagtctcg tttcccgctc cagattcaag aagaacgctc ccgcaagggg gcgtttttcg
    39001 tttgcgtgcg cgccactgcg atcaatcatc gtcctgtgcc gacgtgcgtg cgcgcatgcc
    39061 ggtgatgcgc gcttcctcgc gtgcaacctg gcggtcggca aaccagtcct gcacatcgcc
    39121 tgcaaagctc gccgggcgtc ccttgccctg cacgccctcg gcaatcgacg ccaggctgga
    39181 acgcgccagt tcttcgcgca tcgccttctg cgcattgatc atcaccgcgt ggatgccgca
    39241 cacgccgcgg ttggcccagc gcggtgggtt gccatcgaac agcgcgcagc gcccgcggat
    39301 ctcctggcag tcgaacagcg ccttctgccc ctcaacggcg tcgaccacgt ccagcacgct
    39361 gatgtcctcg ggcgcacgcg ccagctggta gccgccgcgg atgccgccgg tggactcgac
    39421 gatgccggct ttctccagct tcggaaagat cttcgccatg aaggctgccg gcacgccctg
    39481 cagttcggcc aggtcgcggc tgctgggccg ctgttccagc ggcgggacca gccagagcag
    39541 gcagtgcagg gcgtactcga cgcccgttcc gatgtgggcc atgggaccgg tccagaaaaa
    39601 tgtaacgcgg actatagggg cctgagttac tggccgcaag cgagtggtgc cccatgcagg
    39661 gcattgattt cattggcgtt gtggctgggg gaacgcgcac ggcaggggcg tgctggcctg
    39721 aacggtccac catcgactgc ttgcgccaca taacgcggac tcatatgatc cgcgttatgt
    39781 ggcgtgccgg cgcaccacat cactcacgcc cctgccatcc acgcgcatgg gtgcctgaat
    39841 ctcatttccc agaaggactt acctccgtgt ccaaacgcat tgttgtcatc ggcgccggct
    39901 ttgccggcat gtggagcgcg ctggccgccg cccgtcttct cgatcaggcc gcgcgccatg
    39961 atgtgcagat cgtgctggta gcgccgtccc ctgagctgca tgtgcgccca cgcctgtacg
    40021 aaaaggggcc ggagcgcatg aaggccccgc tgcagcccat cttcgatgcc gtcggcgtgc
    40081 actaccttgc cggccgcgtc gagcacatcg atgttgccaa ccagcaggtg caggtggtgg
    40141 gccatggtgc ggatgccgca tcgcagacgc tgcactacga tcgcctggtg ctggccgccg
    40201 gcagccgcct gaactgcccg ccgattccgg gcctgcagca gcacgccttc aatgtcgatc
    40261 agatcgccga cgcggcgcga ttgcaggtgc acctggagca tcttgccgat cgccccgaaa
    40321 acgcaggacg caacacggtg gtgatcgcgg gtgccggctt caccggtatc gaaaccgcag
    40381 ccgaaatgcc ggaccgcctg cgcgacgtgc tcggtgccga tgccgcagtg aacgtcatca
    40441 tggtcgagcg tgccgaggcc ttgggtccgg acctcggcga aggcccacgg ccggtcatca
    40501 cccaggccct gaccgagctg ggcgtgtcgt ggcggctggg ttcgggcgtg gcccacgtgg
    40561 atgccgaagg cgtgaccctc gagaacggtg aacgcatcga cgccgcgacc gtcatctgga
    40621 cggccggtgc acgtgccagc accttggccg cacagatccc cggccagcac gacgccgtgg
    40681 gtcgcctgca cgtcgatcgc accctcaagg cgacgggtgt cgacgcggta ttcgccactg
    40741 gcgactgcgc gcacgccgcc acggacgacg atggcaacgt agcgatgatg tcctgccagc
    40801 acgcgatgaa cctggggcgc tcggccggcc acaatgcggc cgccgacctg atcggggagg
    40861 cgatgattcc ctacgcgcag cccaagtacg tgacctgcct ggacctgggg ccgtggggcg
    40921 ccgtctacac cgagggctgg gaccgccagg tggtgctttt cggtgcggag gccaaggcgc
    40981 tgaagacccg catcaacacc gaatggatct atccgcccag tggtgagcgt gcggagatcc
    41041 tggcgttggc cgacccgctt cgcatcgtgg ttgcctgaca gcgccaggac gttcagcaag
    41101 caccgctccc tgaagggagt ggtgctcctc atggcgcagc acgtgcaaag caccgcttca
    41161 tccccacttc accgtcaccc catcgccccg ccatgcgctg gcttgaagct gcatccctga
    41221 tttccagcag gccttgcagc aatgccccac attccctccg cttacgacca ggacgtggtc
    41281 atcgtcggcg ccagtttcgc cggtgccgcc tgtgcgctgg ctgctgccca gtacggcctg
    41341 cgcgtgtgcg tgctggaacg caaggccgat cccggcgagc gcctgcacac caccggcatc
    41401 gtggtgaagg aagcgatgga acagacgtgg ctggggcgta tgccggagca cctgctgcaa
    41461 cgcgtcgcgg atgtgcgcct gtacgcgccc aacctgcgca acgtgctgct gactgcaccc
    41521 ggctactact tcctcaccac cgatacgccg aacctgatgc gctggctggc cagcgaactg
    41581 cgtgcgaacg gcgtggacct gcatctgcaa cagtccttca ccggtgcccg ccgcagtggc
    41641 gaaggttggg atgtggaagg agtggggcgc tgcgcctatc tggtcggtgc cgatggcgcg
    41701 cgttcgcgcg tggcccagcg caccggcctc ggtcgggtgc gtgacaacct ttacggcgtc
    41761 gaacgcgagt tcgctggcct gcaattgccg cagggcgatg cattgcattg cttcgtcagc
    41821 aagcgcttcg caccgggcta tatcggctgg gtcgcacaga atccgacggg cctgcaggtg
    41881 ggcctggcac tgcgccatga cccggcacag gtgcggccgc cggatatcga tggcttcctt
    41941 gagcacgtgc gcgatgtggt cggcattccg cccgccgcgc ggccttcggc cacccgcgcc
    42001 gggttggtgc cgtgcggccg gccggacggc ccgatcaccg gccctggcgt gatcctgacc
    42061 ggcgacgccg cgggcatcgt ctcgccgctc tcggccggcg gtatccactc ctcgtggcgg
    42121 catggctggg ccgtgggcga tgccataggc cggcatctgc gcggcaccgg cccacagccg
    42181 gagcatgtgg cgcggcaggt ggcgccggcg ttccatggca agcgcctgct gcgctgggcg
    42241 atggatcatc tgcaggccga ttggcccctc aacgtactgc tgcatacggc agccacgcgg
    42301 cgcgtcgccg agcagatcta cttccaccgt cgcggtcttc gcacgtgaag ggagcaggcc
    42361 ggggcgccca agccaggccg cttacgccag gtgaaaattc ctgttgacgc cgtgcagcaa
    42421 tatcgacaca atagcgctcc ttcgacgcag gtcgaacgaa atctgcggga atagctcagt
    42481 tggtagagcg caaccttgcc aaggttgagg tcgcgagttc gagtctcgtt tcccgctcca
    42541 gattcagtag aaacgctccc gcaagggggc gttttttcgt ttgtcgcgat gctggctgct
    42601 gcagtcgcca cagccgcgcc acggcatctt catggaaggc gtggtatcag tgcgcctgtg
    42661 gggagattcc gacatcagtg tcgcaatcgg aatggcgggt ggcatcggtc gtggggacgg
    42721 ccggaggcgt gagccgcggg atgggctccg gcaaggctca atggcttgga atctgcacca
    42781 gcgttctgcg cgtcgcgcgc gctgaaaggc tggcgaaagg ccagcaccag cgttgcctga
    42841 accgcacgcg tgttgtgacg tttttcggac caattctcca tgttcgctcc acaatcgcac
    42901 ggtagccttc atgctccttc tacacgttgg cgggctggtg gtcaggcgta tcactccagt
    42961 ggcagtgccc aggaccgggc gcggatcttc cctgcaggcg gtgctgcgcc ccggcgcact
    43021 gctggccagc ctggccctgg caggttgcat gtcggtgccg gtgccggacc tgcccggcgg
    43081 cacgcccagc gcctggaccc agctgccaca ggggcagggc gtggcggtgg acgccaggca
    43141 atggtggaag gtgctggccg acccggcgct ggatggcctg gtggaccagg ccattgccgg
    43201 caacctcgac ctgcagcagg ccacgctgcg cctgcaggcg gtgcggatcg tcgccggcac
    43261 gtcggactca cgcttcctgc cggagatctc ggccagcgcc aagcaggtgc aggacgccgc
    43321 cgccgtcgat acctatttcc atgcgggcat tgaagcgatc tgggacctgg gcctgttcgg
    43381 tgccgccgag agtgcgcagt tgagcgcgca ggcttcggcc ggcaatgccg aggcgctgcg
    43441 cagtgctgcg caggttgcgg tgatcgccga cgtggtgcgc agctacctgg atctgaccgt
    43501 ggcgcaggcc cagcaggacc tgctggcccg gcagcaggcg gtggatgatc gcggcgagca
    43561 gttggcgctg gttcgccagc gcctgcgcct ggatgagccg ggcgaacttg atcggctgcg
    43621 ggctcgccag gcagccaccc gcgcggccac ggcgcaggcc agcgagaatg cggacaatgc
    43681 cgcccgtgca ttggccctgc tgc
//
LOCUS       DAOKIP010000013        43010 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.013,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000013 DAOKIP010000000
VERSION     DAOKIP010000013.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 43010)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 43010)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..43010
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.013"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..857)
                     /locus_tag="QEL58_000657"
     CDS             complement(<1..857)
                     /locus_tag="QEL58_000657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008268562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pirin family protein"
                     /protein_id="HDS1675171.1"
                     /translation="MKRVTGTYSAPRPHWVGDGFPARSLFSYNTHGQHLSPFLLLDYA
                     GPYSFAPSDTPRGVGQHPHRGFETVTIVYEGEVAHRDSTGAGGTIGPGDVQWMTAASG
                     ILHEEFHTPEFSRRGGTLDMVQLWVNLPARNKMGAPGYQTLLDADIPSVDLPGGAGRV
                     RVIAGRFDGRAGPARTHTPMDVWDIRLQQGHHAELPVADGRTLALVVLKGSVRINGGP
                     PVGEAQLVTFDRAGTDVFVDADSDATVLLLSGEPIDEPVVGYGPFVMNSQAEIAQAVN
                     DFNSGRFGQ"
     gene            1008..1934
                     /locus_tag="QEL58_000658"
     CDS             1008..1934
                     /locus_tag="QEL58_000658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005416755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDS1675172.1"
                     /translation="MFIADIRRCDLNDLFYFAMVVEHGGFSQAGRALAMPKSKLSRRI
                     ALLEERLGVRLIQRSTRRFSVTEVGQDYYRHCKAMLVEAEAAEEAIALSRAEPRGTVR
                     LACPIAILHARIGPMLADFLALHPQVTVQLEATNRRVDVVGEGVDVAIRVRPPPLEDS
                     DLVVRVLARRAWCTSASPALLDQLGTPQVPADLATMPSVDLASPSQQHVWEYTGPGGV
                     QASVHHRPRLVSDDMIALRAAAVAGVGVLMLPRMMISEELARGALVPVLPEWVPKHGI
                     VHAVFPSRRGLLPAVRALLDFLAERFEALDEP"
     gene            2073..2576
                     /locus_tag="QEL58_000659"
     CDS             2073..2576
                     /locus_tag="QEL58_000659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012511233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HDS1675173.1"
                     /translation="MSPNALALVELLIRERRALSRFIARYLDPASTEDTLQNLYLKAS
                     SVPGDPPILEPRGYLYRMAYHHALNRSQADARERRAMAEYAADMAGAGHDGEAQALDQ
                     AQLREITQTILALPGQVRECFVLNRYLGLSEREIATRLGISKSLVGKHVLRAALLIQQ
                     HQQGARP"
     gene            2659..3615
                     /locus_tag="QEL58_000660"
     CDS             2659..3615
                     /locus_tag="QEL58_000660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FecR domain-containing protein"
                     /protein_id="HDS1675174.1"
                     /translation="MTTSEPSPRQARQALRWVIRCSAGPLPERQQRTLQRWLQADPCH
                     ALAWRQQQAFWQGLDAAGPEVLAALPGLTADREGLRPLAPRRRLPWLLASAAAMVLMV
                     AAAPHAVLLARSDLRSSDAPRVVQLEDGSTAVLDVGTALAIDFNGQQRHLRLLRGQAW
                     FQVAHEARPFQVEAAGGQVRDIGTAFSVSMQDATVTTQVSEGVVDVRPGDGSMQRLQA
                     GQARAFRDGRWLQPLRQVGPDGVAPWRRGEVAIDDLPAAQAIADLARYRRAPVWVLGS
                     QSARVRVSGLFHLQHPETGIDAVAAQAGLRVQRLPGGALVVW"
     gene            3798..6920
                     /locus_tag="QEL58_000661"
     CDS             3798..6920
                     /locus_tag="QEL58_000661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDS1675175.1"
                     /translation="MPSTASACHRRATVLALAIYTVLLPLAGVPTAQAQPAVVAPLRQ
                     YAIPEQPLADAVRAFGRQADAQVVFRSDLVEGRRSSAVSGEYSQMQALQQLLRGSGVR
                     AQRGMDGTWSLRAAAEAGEGEGVRVTETLDVAGRLQSEGGEARDRRGYDDVFALDLTT
                     AYSGRDRVERYRGSNPADVVKDLVGVFSGDARNSGALDINIRGIQGPGRVPVSIDGGE
                     QALTVWRGYNGVSNRNYIDPNLIGGIQVIKGPGLVRDVHSGIGGALVIKTIDVDDIVA
                     AGERFGGELKIEGSSNAVAPRLPRLHTGEDYRTVPGFPQGSPNSPYDDRTLVVPVKSR
                     SGNNPFDGEDQAWRLALGVRGDNVDLMAAYAWRKRGNYFSGSKGSGYYDQDPREKYEY
                     QGIDYITTLARYFKPGDEVPNTSSEQESWLVKGTWQINDDQQLKATWRRTLSHYGEIM
                     PSRILSAPDYGRIQWPLSRVDSDAWNLEYRFQPAGSRWLDLYANLWRTETESDTYTAG
                     GFPNFAVGNPAWNPDASPILRNTALANARNDRTGLILSNRFALHSTLDLTVGGNWQYE
                     KLGSRDPYFGTTDGWRMFPRAGRRQEGEGYLTLEWRPVDFLTLNAGVRYSRYWAFDDF
                     LEAHPELLTKGVGGKEAQYTVNELLPRPADLQSRIDALEARRAVWEKRGMGWFIDQSI
                     RNLLAPYETPRPVQHTRPWLPDADGNYTRAGNPCLNGEVAAIPGVQPVFAGSDQVCNI
                     GNSVQSRPVDGRNSRRRDHAWLPTFSATAHLSPAARAYVRYSEAVRFPSMFESTIAFS
                     GSLNPLYALKPEHAYNYEIGYVHNLSALFGNTADADVKLAYYVHKTRDVIERDGNFLF
                     DNIDKQTIRGIELQARFDNRRFFTDLGITRTLENEVCDESTAVLLDANRGLVPNCVQD
                     GFVGGYLLTQAIPKLSINWSLGTRLFDERLELGSRIVHYQRHENPDLQAYRDRLLSGG
                     SGLLWQNVPFTWGNITTVDAYARWRFNEHASVELVGSNLGNRYYVDPATRSTLPAPGR
                     TLKLGVTARF"
     gene            6974..7738
                     /locus_tag="QEL58_000662"
     CDS             6974..7738
                     /locus_tag="QEL58_000662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019337752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transferrin-binding protein-like solute binding
                     protein"
                     /protein_id="HDS1675176.1"
                     /translation="MKMISRSVLAVAASLALVGAAHAADIVGAASAKTDAELYVAVGE
                     SQVNGGPHRAGKAGIGVGTVSQAKPVDFQGLSAYSAPTTVNGVTVRTLAMPITGAPGS
                     HAGMGHFNFVKVGSGDVWFGEWSKDGAAGGFNNRQVYFVGDRAGTTLPAGVASYTVAG
                     LNKFNGSNLLSGTFDADFGAGTLDGALSGNGLNLAIVANINSADASFAGSANVNGSVN
                     GTTQGQFFGANAATLAGIATFAGNSQYDTAFGGSKN"
     gene            7829..9283
                     /locus_tag="QEL58_000663"
     CDS             7829..9283
                     /locus_tag="QEL58_000663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF560 domain-containing protein"
                     /protein_id="HDS1675177.1"
                     /translation="MRHPIFLVILLLAAADVRAQQDDLRRVLEQGSELRHQQQDQQRL
                     RQAESERPTITIDGQTLRVERTVDDLGQALYLSLQHQQWGAAQRFLDEYIELPGHDPL
                     LRHYAQGGLARVAGNHRRAASEYEALLQAQPDFLPARLELARVYAEDQRDRDAVALFT
                     AIAGGINADDPATAGVRGRVDAYLAALQARQRWKGALAAGPAWSDNINRSSASRTCLF
                     GVGETCIIQRNLPDAQRAMGLDYDGNLERRWALAGHHGIYVRGLAFGQAWRGHSAYNE
                     LNASVQAGYSWRSARHTLQIAPSYDYQGLGNRALQGGSGLHGEWQYALDARSLLKLEA
                     DWKRQRYRQRGLASNYDGELAAVYATWFRALNPRWTLFAGLDLSDSRAANPANGYRQR
                     GLRLGAARQWPGTTATVFVSLRERDYDAWSPLLEARREDSEQNLIAIVRSERLAVAGL
                     VPSLSLRYARIDSNVGWLYSHDRSLLSLKWERAF"
     gene            9401..9805
                     /locus_tag="QEL58_000664"
     CDS             9401..9805
                     /locus_tag="QEL58_000664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HDS1675178.1"
                     /translation="MLEAGNKPEGLKGLRVLVAEDEFAIAMFLVDYLELKGAQVIGPA
                     GDLQALGRLVDTHPIDVALLDINLGGEQVYPLADRLAEAGTPFLLTSGYDDNLPSRFA
                     AAPRCTKPYHIEALVQQLAGLVAAPQASAGIA"
     gene            9815..11401
                     /locus_tag="QEL58_000665"
     CDS             9815..11401
                     /locus_tag="QEL58_000665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HDS1675179.1"
                     /translation="MGRRIEGFHTADRQAGMPPALRLHARHDGMAARIARHDWASTAL
                     GGMDRWPPHLRATVDLMLAHGFPMIVLWGEQLVQLYNDGYAEILADRHPAGLGQPTRE
                     CWPEVWHINGPLYTRVWQGETLTFEDKLYPLARHGRLEDVWFTITYSPIRGEEGRING
                     VLVTMFETTAAHLAQAAREREELRRRESERRLELAFRMLPVGLCIVDLDGRMLLSNDQ
                     MRAYLPTGKVPSADADNQHRWRGWHTDGSAIGPNDFAIARAMRGETVVPGLEFQYLHD
                     DGRARWTRVAAAPLRDADGEVSGVFAIAVDIDDLKRATERQSVLLAELQHRVRNIMST
                     IHALAWRTRASVGSVDEYAERLCGRLMSLARTQSLLTRGANAGVCLRGMLNEEIAAET
                     PSMAAYCLQGEDVLLPPKAAEVLSLAIHELATNALRHGALSHDSGRVEVSWHLQVQDE
                     HPWLGLHWCERHAEVEGWALPRQRGLGRTLIEQRVPYELAGTGELRFSPQGLDAWIRF
                     PLRERDSLLQTDAPQPGPAR"
     gene            11473..11814
                     /locus_tag="QEL58_000666"
     CDS             11473..11814
                     /locus_tag="QEL58_000666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008267874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system
                     prevent-host-death family antitoxin"
                     /protein_id="HDS1675180.1"
                     /translation="MTLPLDLPGLEKAPASSVKTRGWPSLMRTVREKQALVITNHNHP
                     EAVIVDIRTYQELLAKAAGGDAGERSEELMRLRSEFDHTLAGLQRGEGLGKVLGQPIR
                     RGRKVTLGRPL"
     gene            11818..12444
                     /locus_tag="QEL58_000667"
     CDS             11818..12444
                     /locus_tag="QEL58_000667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010485380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDS1675181.1"
                     /translation="MGRILVLAGVNGAGKSSLLGTWLEAEGLSWFNPDSFTRRLVEAG
                     WPLPEANAEAWQEGTRRLRQAMADGTDFAFETTLGGNTIPRLLREACERHHVAIWFCG
                     LADVELHIARVAARVAAGGHDIPVEKIHARFDSARENLLDLLPHLAELHVYDNSAPAD
                     AEGCVEPLPVLAMAQGQLQYPVSVAELLHTPDWAKPIVMRAMELNAAP"
     gene            complement(12482..13969)
                     /gene="proP"
                     /locus_tag="QEL58_000668"
     CDS             complement(12482..13969)
                     /gene="proP"
                     /locus_tag="QEL58_000668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine betaine/L-proline transporter ProP"
                     /protein_id="HDS1675182.1"
                     /translation="MQDTPDSHAHFGWFKRRRHLKVDEITVVDKPMLKRAVGAAALGN
                     AMEWFDFGVYGYLAVTIGQVFFPSSNPTAQVIAAFATFTVAFLVRPLGGLVFGPLGDR
                     YGRQKVLAFTMILMALGTFAIGLIPSYERIGIWAPVLLLLARVVQGFSTGGEYGGAAT
                     FIAEYSTDRNRGLMGSWLEFGTLGGYIAGAGTVTALHMLLSSEQMLDWGWRIPFLVAG
                     PLGLLGLYMRMKLEETPAFRAFAEEAEKREHDRPGLGALFQVHGRQLLVCMGLVLVFN
                     VTDYMLLTYMPSYLSVTMGYAESKGLLLIIIVMLVMMPLNIVGGLFSDKLGRRPMIIG
                     ACIALLVLAVPCLLLVGSGNDWMIFLGLMLLGLALVCFTSSMPSTLPALFYTPVRYSA
                     LSIAFNVSVSLFGGTTPLVTAWLVERTGDPLVPAYYLMGAAVIGLVTMLFVKETAGLP
                     LRGSPPAVGSDKEAAALLKSDVPVTVDPSLPPLPDVAEPEQVKPA"
     gene            14470..14886
                     /locus_tag="QEL58_000669"
     CDS             14470..14886
                     /locus_tag="QEL58_000669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014647339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="host attachment protein"
                     /protein_id="HDS1675183.1"
                     /translation="MTRRIPEGTLIIVADGGSARVFTNVGNEHQLSLKQEGELRLQDI
                     SEQGISGQGPAGAVPKDMSISQLNEATFAKQVAEQLNDDALNNRYAHLVLVADPTTLG
                     RIRPLLHKEVQSRLLGDIAKDLTNAPLADIQKSLAA"
     gene            14892..15215
                     /locus_tag="QEL58_000670"
     CDS             14892..15215
                     /locus_tag="QEL58_000670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012480421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HDS1675184.1"
                     /translation="MPFMRDHLSAEPARADVEAQPGWQLLEFGAPWCGHCQAAQAALQ
                     SFVDANDLVHWKIEDGKGKPLGRAFKVKLWPTAVLLHDGHEVARVVRPLDSADLAALQ
                     TALPD"
     gene            complement(15234..15830)
                     /locus_tag="QEL58_000671"
     CDS             complement(15234..15830)
                     /locus_tag="QEL58_000671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008264844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HDS1675185.1"
                     /translation="MARRAARWIAIAGMIATASAVHADPPPPPPAVARTAQDDYTILR
                     LLVTDDQGRLLLEHNRSGWMTPAVRANRKQSVQEALRQLATELGLQVSPFALAAVYSY
                     RFNEDPPDPTHDAVSFRQHYRASLRSGHPPATTADKQYRWVSRDEAAHLIGLQALRME
                     TLQVLDHPETLWGGAFELSFKGDEATGTEMIEPFYPLR"
     gene            complement(15907..16152)
                     /locus_tag="QEL58_000672"
     CDS             complement(15907..16152)
                     /locus_tag="QEL58_000672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014647337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675186.1"
                     /translation="MIHERPLSPAMESLLHRIEQAFNSAEGMAILIGEQYGPEPKPPA
                     PMGYNPKQIATAMIMLSQHGRCLLQALREEAEKVTLH"
     gene            16557..18908
                     /locus_tag="QEL58_000673"
     CDS             16557..18908
                     /locus_tag="QEL58_000673"
                     /EC_number="3.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010485392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GH92 family glycosyl hydrolase"
                     /protein_id="HDS1675187.1"
                     /translation="MPMPTLDRRFLIAVAATAMLASGAALAATPKSPAERAYAAVDPF
                     IGTGGEGHTYPGATVPFGMVQLSPDTRIQPREKAYGWAAGYRYDDSSIVGFSHTHFSG
                     TGHSDLGDILLMPFTGTPGLERGDPEKPRSGYASRFRHDDEKAEPGYYAVTLDDYKVR
                     AELTTSARVGVHRYAFPKGTEAKVLLDMRTSMYDYPGKVLWSRVRVRADGTVTGFRET
                     RGWAPGRQLYFAMRFSRPLAGHELHNTEQDIVYKGFPPPGEKDPAQRAQIEGRQLFGT
                     FAFGKLDAPLVVKVAISPVSEAGAIANLDAEVADFDFDRVRAQAKQEWTQALSVLDIE
                     APEHARRSAYTALYHTMLGPTLFMDADGRYRGSDNAVHKAEGYTNYSTFSLWDTYRAL
                     HPLLTLVQPEKRNSDFVNSMLAHHEHSPYGMLPVWSFHGLEDWCMIGYHAVPVIADAY
                     VKGIRGFDADKALKAMVETANYGPYDGIAQYRELGYVPIDEEGEAASKTLEYAFDDWT
                     IARMAQAMGKTDVAATFDKRAGNWRNAFDKDTGFMRARKRDGSFRTPFDPSASGYGTD
                     YTEGNAWQYSWYVPQDVAGLAAAHGGSDKLLARLDEVFNAKVDPSIFEHMEDITGLIG
                     WYAHGNEPSHHVAYLYAYAGQPWRTQARLKQIMDTQYADRPDGLAGNDDVGQMSAWYV
                     FTALGFYPVAPGSGEYILGRPFLPRTAMRLPSGKTFTIVADGLDDKHTYVGSVSLNGK
                     PLERTFLRHDEILAGGELRFSMQAEPNRDWPGQGAQAPYSMSR"
     gene            19254..22067
                     /locus_tag="QEL58_000674"
     CDS             19254..22067
                     /locus_tag="QEL58_000674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012444332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system tip protein VgrG"
                     /protein_id="HDS1675188.1"
                     /translation="MHTLHAHEDAALLHRFELPGAGSLLVERWHGREALSEGLDYHID
                     VLAAHADAACEHWLGRPATLHTRDAQGRDIPRAGLVREVRRLDGDREFTRYRIRLAAW
                     TWWLGQQRNSRVFRDATVRQIVDAVFAEHQAGACWHWSDDARARLDALPPRHYCAQYR
                     QSDMDFVACLLAEEGIGWRVEADAEAPALHRIVLFFDSVALPQDPLSARDGALRFHRG
                     HAAEQEDSVVQLARHARLGPRRLSMVSDDFRQDRTLAVQLPMDGGGHSPVEQYLVCGA
                     QAFESHAEAERRAALLAQRHEAERQGWQGIATVRCLAAGTWSSISQWSPQQVPELLLT
                     SVEHAGVNTLPARLRQHRPEHALQRDGFLPDALQRHAQQLGYAAAFHAVDRQRPWRPR
                     APEQEGEAQVVGRQTAIVIGPDDRTGVAEGDQVHADALGRIRVRFPLMDATGRPAHSA
                     WLRVAQRFAGPGVGSQFLPRVGQEVLVGFLQGDVQRPIVLGALYNGRGENDPALHAQA
                     CDTRVGGTGNLAGGNAPAWHAAGEGEQAHRHPGALWGISSREWGGNGGSTLQFDDTDD
                     QLRLQLATTQASTQLNLGHVIHQRGNYRGSLRGQGFELRSDAAGVVRSERGLWLGAYP
                     AGAAQPAGTAVQAGALLAQCGTLAAAFGQSARLHGTAGLHASTALIPLRDAAMGVVAA
                     DDFGQAHVAAGDAAAAGGVPHCTAPLLGMVAPRKALVAGQAVFWQAGQSLLLGAGAAG
                     QAVVKGHARLHASQSVGVLASASASASRCPSGMTIAAGEQPVDIQAQSDAVKLQSRQS
                     QHLASTHAAIELAAGRALVVQVEGGANLTIEGGNIQFNCPGTLTVHAGQHSFIGPASL
                     AYPLHTLGAAPCRARFLVRDHAGAPLVGAAYSMQLPDGRWLSGNTDGDGLTEEVVTDG
                     PEKVGLFVDDERHEGYLRDADNS"
     gene            22095..25184
                     /locus_tag="QEL58_000675"
     CDS             22095..25184
                     /locus_tag="QEL58_000675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein"
                     /protein_id="HDS1675189.1"
                     /translation="MSSGKFTLFRHDGHGNVVPCADVTYRIRDVLHGFAVVASGTTDS
                     HGDTDPVTLPERAQTPAPPVLPGWRRGWPNLGPGPAGLKLPWPRRNVPDAAAGAGQGA
                     RLPHSEHRYQLQVRDDASGEWTDPLLHPDCHEPAQLGPWSEDPRAEASLRPALQVRRL
                     RLRPFHQLQLQRQSPPTPVPEAGFVGYRRDRDGTEVVALDVHGRPVRGVTDRQGMTPR
                     LFCEQDLRLVFTLPGSRSELRSALSEPRVVGQPRLVPVVPVKMHAVVSGPGEGATLEL
                     AGKISAPALLNVADEELLLLTPEVWEEFREVARSIEGSLSAVPRARWQLEEALAGRSL
                     EAVAQAEKNLGMAEDRAAAMLNGTFARKADLVEVITFESYSRKGDGGAQQEVGLRRNY
                     LPRFKYDEFKGRRVMGVPTHVDLGMSTRAGDSAMSVGSAARQKGPAFQNFDSRKFMQS
                     LMTIKAQIGRSVKAPNIQFDLIELGGNQFSELVRASETYSVETSAQWLRFVAGAGASA
                     QAEWDPLHRKASAKVDAGAHYKLALFEAKAVHTWSIPSRTGWMQRYGDIDLGAIVFQM
                     SLELHGFAGVKRALMGAAGVSIDRGAAKVEAQPRDRDDSFVPSFDIVRGMPRADMGDP
                     PDKDGRPSRRVVMAAVGEKPPESLNGMRVNAEAFVGVEAGLTPAGELQWLPPQQGTPV
                     TLAKLSLDTAGSAGVGAKAQLYVYYAKGRFRIKVSARLCLGIGCKGALDFVVGVEGML
                     EFAKWVYYQLAHAGFKELMFFADGVLEYLSQLVFLVTSTEGSAEKFLIQNIDRAKVTV
                     IDKIRQVQIVQNRIELVRRVNSSAGYAGRKGAWLIYATPMTRGMLLYAITRHNWMTHM
                     SNPAQVEGVFDPQMHYLPDHKKAILRVIKGITLASEWDAMFRHMTEQGEPSSEPPGKL
                     EGDVVRFLNYGHSLSGDLKGKVFEPINTDGDAPSEGMGSNYLEQFLAHRRRLLGSFPK
                     GYEVAQLQRMDLDALLALDGRDAPTFASLDGDYLRSRDQEQRLVALLGLGGSPANAS"
     gene            complement(25243..26214)
                     /locus_tag="QEL58_000676"
     CDS             complement(25243..26214)
                     /locus_tag="QEL58_000676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002801752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SUMF1/EgtB/PvdO family nonheme iron enzyme"
                     /protein_id="HDS1675190.1"
                     /translation="MPPLRPVLLKSLVPTALLLTACQGSTVKAPQKHSPELTARIEAL
                     SQKTKKDLVEVEGGTFIMGDFGPIDPRAKMPYSGERDDDVLREVTLSSYALGAKKITY
                     ADFDVYTDATGQPRTAQYPMDLEYRNLPDDLPVGVSWEAAQQYCGWVGELIGRKMELP
                     TEAQWEYAARNRGQFVIWPTDDGSVDDGRNVGDYKTVRAYASKHGYTIGPTPLGQYPP
                     TPLGLYDMIDHGFEWVFDWYRDPYDISDIQDPRGPAHGDEKVQRSHSNQGGSALFIVS
                     MTFTRFKNDPAPGPDPLLSEEGRRLFNPNGFNRFRCAAADSSSSKNS"
     gene            complement(26108..27277)
                     /locus_tag="QEL58_000677"
     CDS             complement(26108..27277)
                     /locus_tag="QEL58_000677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002801752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SUMF1/EgtB/PvdO family nonheme iron enzyme"
                     /protein_id="HDS1675191.1"
                     /translation="MPPLRPVLLKSLVPTALLLTACQGSTVKTPQKHSPELTARIEAL
                     SQKTKKDLVEVEGGTFIMGDFGPIDPRAKMPYSGERDDDVLREVTLSSYAIGAKKITY
                     ADFDVYTDATGQPRTAQYPMDLEYRNLPDDLPVGVSWEAAQQYCGWVGELIGRKMELP
                     TEAQWEYAARNRGQFVIWPTDDGSVDNGRNVGDYKTINRYGSQHGFTNGPAPLGRYPP
                     TPLGLYDMIDHGFEWVYDWYQDAYDVSDVNDPRGPMHGEQKVQRSHSDRGGDSLFIVS
                     MTFTRFQAPPDPGPDLYLPEDARHEFNPNRANKFRCAADASPRPSGSTASRPSSLSLV
                     PPVSRHCYADSVHPELIGDSHAASSTRPSEITCANSTSADGVPRLDRQSAPEALS"
     gene            complement(27492..28874)
                     /locus_tag="QEL58_000678"
     CDS             complement(27492..28874)
                     /locus_tag="QEL58_000678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HDS1675192.1"
                     /translation="MTERVHSLRGLLLRRLWLPLLVLMLCSAVGSFALARFYAGQVYD
                     RWLLDSAMSLSELVEVQDGRASIEITPAVSRMFTWDTTDEVHGEVVDAGGGRLYGDLP
                     EALPRPAAAAARDDEAVYYDARLRGQPVRMVEVVVSAGPGHDIRLRVAETLRKRHRLE
                     RKLLMTSIPFQAAILALAAWLAWSGTGAAARHANQVARRLASPRPDPLAPLEPAQEAP
                     RELWPAVEAYNALLQRLDAMQAAQRRFVSNAAHQLRTPLAAMQVELESSLRQHDPQAQ
                     QLALSGTLGGLARLQHLVNQLLMLSRSEDPQGSALPLQSLDLAVLARGVVERYADRAL
                     AAGVDLGYDGPDEGVSIQGDPQLLREALGNLLDNALRYGSTRGVITLGLQQDAEGVQV
                     WVDDDGAGIAEAERGRVTERFYRASSEGDGCGLGLAIVAEIAQRHGAALVIDTAPIGG
                     ARVGLRFRSR"
     gene            complement(28867..29541)
                     /locus_tag="QEL58_000679"
     CDS             complement(28867..29541)
                     /locus_tag="QEL58_000679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019337742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HDS1675193.1"
                     /translation="MRILLIEDDAALADGLIRALQGAGHLCDHLSRGLHAPAALASAP
                     YDVMVLDLSLPDVDGLDLLSRLRNDGVTLPVLILTARDGVDDRILGLDRGGDDYLAKP
                     FALGELEARLRALSRRRSDAPAQKRLGRLCFDSIRNEAQVDGQRIELTARELALVEAL
                     MQHPGRTVTKQRLFDALYSWDHEANLSVIEVHVSRLRRKLEQARAGVGIRMLRGLGYR
                     LEAGGD"
     gene            29604..30851
                     /locus_tag="QEL58_000680"
     CDS             29604..30851
                     /locus_tag="QEL58_000680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HDS1675194.1"
                     /translation="MNFSLRLAAVLAALVCAPAASALSLADAQRAMQAHNPDLRAAAL
                     ELRGVQGDAQTAALRPAAELSIGSSKISPKHGIGPGRWQDKRVDSTLGVGWTWERGGK
                     RALRIRQADALLQVAGLEMLDTRRRQQVALHEAYFGLKSAQERVQIAEDNRQSSIEQM
                     AAADKQVATGAMAPVDRARLAVDDLAVADAAREAALDLRDARHALGLLLGSDDSSSLS
                     ADDPWPDTRSVAATRAFDPQQRADLRAAQSRLAAADAGVALARSERHRDIQLGVEAER
                     EPTDISGVTWGVSLTIPLGGPSRARGAIQRAEADRDSAALELQVLQREARAELDQLQA
                     SAQSAAQRRTDYEGLQSDAARKAVQGIELAYRRGAASLTDLLDARRSWRDFEAALIEA
                     RVDHAIALARWEAATSVTEGESR"
     gene            30848..32020
                     /locus_tag="QEL58_000681"
     CDS             30848..32020
                     /locus_tag="QEL58_000681"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014647332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HDS1675195.1"
                     /translation="MKSTVAHRPRARPALLPALLALALLSGCGREPASYAEDAPQVSA
                     GQIQFPADSRQLDVLRTEAVTAGASASLQLPGRVVWDETRSSALRTPLPGQVARIEAQ
                     PGQQVKAGQVIAWITSPEFGQAQAEGARGRAELQQARKELERTRELHAAGVASGRELD
                     EAEANFAGSQADHARATAFAKAYGNGQHVDQRLPLRAPIEGVLVERRMSPGMSVSPDS
                     EQPLAVIGDPDRLWLLLDIPESLAGRLKAGMPVSVPGADGKPLQATLQHVDDFVDSER
                     RVVQARAELDNRSRGFKAGQYVRAQVALPAEGGVSLPDAAVLLINGTQVVFVEEGKGR
                     FVRHAVHAEELGDGRLWVREGLAAGSRVVVEGGLLLQQLVDSAPTAASSGTGHAAP"
     gene            32017..35088
                     /locus_tag="QEL58_000682"
     CDS             32017..35088
                     /locus_tag="QEL58_000682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HDS1675196.1"
                     /translation="MIDRLIAYCLRQPLMVMLALLLFIGAGIAAFRVLPVEAFPDVSD
                     TQVTVVSLHPGRAAEEVEREVTMPLEVALSGIPHSVRVFSHTQFGLSMIILTFDDKAD
                     DYFARQQVLERLQGVELPEGVTPELEAMSSAVGEIYRYVLKAPHLTSTQLRTVQEWTM
                     ERSLRTVPGVADVISFGGFARTFQVKPDLDKLRDRGISLGEFAEALEKGSSNAGGGYV
                     ERGQQQFLIRGVGLMRSPADIGNVVVGQRGGTPILVRDLASVADTGLPRQGLVGQDDN
                     DDAVFGMVLMRKGENPSDVLDALHARIAEIEANQLPAGVSIEPFYDRSWLVSTTLKTV
                     FRNLLEGAVLVFLVLWLFLYNARAALIVAAMMPLALLSTFLGLHLWGVPANLLSLGAM
                     DFGIIIDGAVIVTEHIVSRLSKLPPTADRKTRFSTILSAASEVGRPTFFSMMIIIAAH
                     IPIFTLQRQEGRMFAPMAYSVTSALIGALILALTVVPLFCYWWLRRDRMRDGNPLMDR
                     LTGWYKPVLERALARPRAVVLTAAALLVGTLALGTRLGSEFLPELDEGSIWLTATLDP
                     STSLAEAQQQSRRIRELVGTFPQVSTVVAKLGRPEDGSDAKGANQIEALVALKPEKEW
                     PKGVDKRQLVSDLQRTLEQRIPGPEFSISQPVRDNILESISQIKGQVVIKVSGSDLDV
                     LNRQAQAILGQVRSVDGVESAFIDRDGALPQLQIEIDRDRAARYGLNVRDIDEVIETA
                     LGGRQVGELWEGDRRFPITLRLDDADRDLQRLRTVPVGIGDGHAVTLSDVAEFRMASG
                     AINISRENAQRVKAVSIFIAGRDMGSVVADMRKRVDASVQLPEGYRLEWSGEFENQQR
                     AMKRLGWVIPLSVLLIFVLLFDAFKDISSAALILANVPLAMIGGILALWLTGIPLSVS
                     AAIGFIALFGQAVLNGVVMLSRFAQLREQGMDLLQSVVQGSLQRLRTVLMTALLAMFG
                     LLPMATSHAIGAETQKPLAVVVIGGLLSAMLLTLLVLPTLYYWVHRRREAR"
     gene            35448..36341
                     /locus_tag="QEL58_000683"
     CDS             35448..36341
                     /locus_tag="QEL58_000683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011050074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDS1675197.1"
                     /translation="MDRFTAMRAFVRIVERRSFTRASEDLGLPRATVTDAIKALEQRL
                     GVRLLNRTTRLVVPTLEGEAFYGRCLRLIADMDDAEAAFRDVPPRGLLRIEVHGTLGR
                     HLLFPHLPDFLQRYPDIELDVSEGDRYVDLLREGVDAAVRVGTLADSDLAARRLTLLR
                     EVTVASPGYVQARGLPEGIDSLKDGHEMIGYRSSATGQLIPLEFQQDGQVRYVPLPAR
                     VLVSGADAFLGAALAGLGIIQAPRYRMDPYIARGELVELLPQMPPTPSPLNLVYPRNR
                     TPSPRLRVFIDWVAALFDRAG"
     gene            complement(36301..37707)
                     /locus_tag="QEL58_000684"
     CDS             complement(36301..37707)
                     /locus_tag="QEL58_000684"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012480413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal sensor histidine kinase"
                     /protein_id="HDS1675198.1"
                     /translation="MSLRRSMAVRLTVLFATVATLVLAALGVAIYVSARHDLVAQDFT
                     ELENKVALINDLASRGPASARAQRLAAALGHHPDIAFHIADDRGRVLFSTAPPLLREH
                     ARSQPVDTVPRRHDWTLADGRCMHALHLRQTLADGSQLVTLLAIDDARHAAFLQRFRH
                     LLAIAIIAAALASSLLGGYVVRRTLRPLRTLADEAREITAGRLQRRLSARRAPAELEQ
                     LAQTLNGMLARLQQDFARLTEFSGDLAHELRTPITNMLTQVQVVLAHPRSNEAYRETL
                     ASCAEELQQLAQTVGDLLYLAQTETPGVLPSREPVALDAVVDSLLEFYGLLAEDRQLT
                     LRRDGIARVNGNPLMLHRAIANLLSNALKHARAGSEVRVRLEQGAGRCRISVHNLGTP
                     IATEALPRLFDRFYRGERSRHEGAGLGLAITRAIAQAHGGSVGVASDETGTVFELLLP
                     SAAAGTTPPDRTAPPPSR"
     gene            complement(37704..38402)
                     /locus_tag="QEL58_000685"
     CDS             complement(37704..38402)
                     /locus_tag="QEL58_000685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal response regulator transcription
                     factor"
                     /protein_id="HDS1675199.1"
                     /translation="MKLLIVEDEPKTGNYLRQGLIEAGYVVDLACNGVDGLHLAGTGE
                     YQLVILDVMLPGLDGWNVLSRLRADGWPLPVLFLTARSSIADRVHGLELGADDYLAKP
                     FAFAELLARVRTLLRRGQALPQAERIVIADLVVDTLRRRVERAGQRIALSQKEYTLLE
                     LLARRQGEVLPRSLIASQVWDMNFDSDTNVIDVAIRRLRAKIDDAFDAKLIVTVRGMG
                     YVLEAPEDGAARDG"
     gene            complement(38448..39332)
                     /gene="copD"
                     /locus_tag="QEL58_000686"
     CDS             complement(38448..39332)
                     /gene="copD"
                     /locus_tag="QEL58_000686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014647326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper homeostasis membrane protein CopD"
                     /protein_id="HDS1675200.1"
                     /translation="MVELSPYGLRLALYVALMLLFGRTLFVRPLLPRGALLAMTFIAL
                     LLVAVDALARLSGVLGIAPTDIDGATAHWFLSGTPVGQAGLLRGVALLAMLPLLAINR
                     PQHGLWRAALMLLSAVALASLAWNGHAAAGDGPGGTLRLIAGIAHLLAAGAWVGAIAA
                     LLQLALRPQGVGLRERTHALWRAAHGFALPGTLIVATLAMTGTYTYVDLGGSVQTLAS
                     TAHGRWLLLKLALVGGMLALAALHRWRLVPALAVSIRGGWQPRPLRALRHSLACESVL
                     VLLVLACVAVLGTLDPLA"
     gene            complement(39343..39720)
                     /gene="copC"
                     /locus_tag="QEL58_000687"
     CDS             complement(39343..39720)
                     /gene="copC"
                     /locus_tag="QEL58_000687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper homeostasis periplasmic binding protein
                     CopC"
                     /protein_id="HDS1675201.1"
                     /translation="MIRSLQRPALLMLMLAGLAIAPLALAHPSLVRATPAADATVAPA
                     SQIELQFSEKVMPRATRIELSMDHGRMKMAMPTTAQEVSEDGHTLRARFGKPLPAGRY
                     ALQWRAVGQDSHPVTGTYRFTVK"
     gene            complement(39837..40691)
                     /locus_tag="QEL58_000688"
     CDS             complement(39837..40691)
                     /locus_tag="QEL58_000688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012511210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDS1675202.1"
                     /translation="MPALADQLLRETGPQPAAAHVSPDGAVVLLRHRFEASEGEMGHP
                     RQLRLGMAMAGGGWLQQRTLTGVLQAPWRPGRFNLVLPGDSGTYASPAVDVLGIAIDT
                     HAYPHDAPTLQHLQPLAARLHHDPVVASVLQALWCSAQAGACLPGFLEHGAQVLLHRL
                     GQLAGQRREVGGTATPLSAQRLLQLKDYIDARQGQPLTVTELAAAVQMQPSSFGRALR
                     AATGLPPYAFLTRHRMQRAGAALAQGRTVTDVALASGYANPSKFSAAFRRVLGCSPSA
                     WIGQARSG"
     gene            40880..>43010
                     /locus_tag="QEL58_000689"
     CDS             40880..>43010
                     /locus_tag="QEL58_000689"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008268319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDS1675203.1"
                     /translation="MPALAQQADPATLDGVRVTGSKRDTPYLKSDLSVTVLDRQALKE
                     AGVTEFRDLDKLAPNVKFNAMGQLSNMFISIRGIESNPFLVNRASVYIDGIPFRELSN
                     AVLNQVESVEVLRGPQGTLYGANSESGLVLVRTRGPADAREGELNVRSTWFGNGNGTA
                     LDGFLAGPLSRDGRLSGSVAFMGSDEDAYLKNLTPSGARGRVGEGYLQGKLRWRPSDY
                     VSVNALAYHLRTRAPGMFEYEYLPLDTGLYNRTYGTSLNGDRRAGDFTYINDAPKRTA
                     KDESVAGLSAQWQLQAGTLDVAASWRNEEVTSAGYDFDMTQSAALAGRIYDRKNEWTA
                     EARFSSPSDQALTWMAGVSTYRNSKDSILGTFVGPALRGLDSYNLAPRQTSKGEDYSV
                     FATASYTFPSLPQLTASVGLRHEQARRSTEQRAGALDLGAGGRVLYRDAALAHTFSAT
                     LPRVSLRYDATDDLSFYAASAKGYIPGGFNLAAAQSDVVNDKVLCYESERMWSHELGF
                     KMNLAGGRGHIGGALFHITSDNWQEIQVATDANGRPISSDYVGSDASIRSRGAELEGV
                     FEVMPGFTLMANVGYVDAKYTRLWVSVDQNLDGKRVKLTPHYTGYLAARYQFESGLYA
                     RLESQFTGSSALDERNRAFQPAVAVLGVQLGYERGPWSTRVFVQNLTNKRRINGLIFD
                     NLAFGRDGNYYGPVDSPRIVGAEVGYRF"
BASE COUNT         7154 a        14073 c        14768 g         7015 t
ORIGIN      
        1 atctggccga agcggccgct gttgaagtcg ttgaccgcct gcgcgatctc ggcctggctg
       61 ttcatcacga acgggccata gcccaccacc ggctcgtcga tcggctcacc gctgagcagc
      121 aacacggtgg cgtcgctgtc ggcgtcgacg aacacgtccg tgccagcgcg gtcgaaggtg
      181 accagctgtg cctcgccgac cggcgggccg ccgttgatcc gcacagaacc cttcagcacc
      241 accaacgcca gcgtgcggcc atcggccacc ggcagttcgg cgtggtgtcc ctgctgcagg
      301 cggatgtccc agacatccat cggcgtgtgg gtgcgggctg ggccggcacg gccgtcgaag
      361 cgaccggcga tgacccgcac gcggccagcg cccccaggca gatccaccga gggaatgtct
      421 gcatcgagca gggtctggta gcccggcgca cccatcttgt tccgcgccgg caggttcacc
      481 cacaactgga ccatgtccag cgtgccgccg cgccggctga attccggcgt atggaattcc
      541 tcgtggagga tgcccgaggc agcggtcatc cactgcacgt cgcccgggcc gatggtgccg
      601 ccggccccgg ttgaatcgcg atgggcgact tcgccctcat agacgatggt gaccgtctcg
      661 aaaccacgat gcgggtgctg gccgacgcca cgcggggtgt cgctgggcgc aaagctgtac
      721 gggccggcgt agtccagcag caggaacggg ctcaggtgct ggccgtgggt gttgtacgaa
      781 aacagcgagc gggcggggaa tccgtcgccg acccaatgcg ggcggggggc gctgtaggta
      841 ccggtgacac gcttcatggc gatctcctgg ccggggctgc cggccgttgc tcttcgttgc
      901 ggagacgata tggctgcaac aattagcccg gtaggcgcca ttatttgccg tcatagtcct
      961 atctggtgaa caatgggccc agaccttgcg ccgcaagaat tcgccccatg ttcattgccg
     1021 atatccgccg ctgcgacctc aacgacctgt tctacttcgc catggtggtg gagcacggcg
     1081 gcttctcgca ggccggccgt gcgctggcca tgcccaagtc gaaactgagc cggcgcatcg
     1141 cgctgctgga ggaacggctg ggggtgcgcc tgatccagcg ctcgacgcgg cgcttctcgg
     1201 tcaccgaggt cgggcaggac tactatcgcc attgcaaggc gatgctggtc gaggccgagg
     1261 ccgctgaaga ggcgatcgca ctgtcacgtg ccgagccgcg gggcacggta cgcctggcgt
     1321 gcccgatcgc gatcctgcac gcgcgcatcg gcccgatgct ggccgacttc ctggccctgc
     1381 acccgcaggt gacggtgcag ctggaggcca ccaaccgccg cgtggacgtg gtgggcgagg
     1441 gcgtggacgt ggcgatacgg gtgcggccgc cgccgctgga ggacagcgac ctggtggtgc
     1501 gcgtgctggc gcgccgcgcc tggtgcacca gtgccagccc ggcgctgctg gatcagctcg
     1561 gcacgccgca ggtgccggcc gacctggcga cgatgccgag cgtcgatctg gcatcgccca
     1621 gccagcagca cgtctgggag tacaccgggc ccggcggcgt gcaggccagc gtgcaccatc
     1681 gcccgcgcct ggtcagcgat gacatgatcg cgctgcgcgc cgccgcggtt gccggggtgg
     1741 gggtgttgat gctgccgcgg atgatgatca gcgaggagct ggcccgtggt gcgctggtgc
     1801 cggtgttgcc cgagtgggtg ccgaagcacg gcatcgtgca cgccgtgttc ccatcgcggc
     1861 gcggattgct gccggccgtg cgggcactgc tcgatttcct ggccgagcgc ttcgaggcgc
     1921 tggacgagcc atagcccccg catccacgca tggcgtggat ctaccgaatg tgtcgactcg
     1981 actgtgcttg ccgcccgtgg ccacgcagcc cacaattcac ctccggaccg tcgccatcac
     2041 gcccatcatt ccccggtccg gccttggcac ctatgtctcc caatgccctg gcgctggtcg
     2101 agctgctgat ccgcgagcgc cgtgcgttgt ctcgcttcat cgcgcgctac ctcgacccgg
     2161 ccagtaccga ggacaccctg cagaacctgt acctgaaggc cagcagcgta cccggcgacc
     2221 cgcccatcct ggagccgcgt ggctatctgt accggatggc ctaccaccac gcgctcaacc
     2281 gcagccaggc cgacgcccgc gagcggcgcg cgatggccga gtacgccgcc gacatggccg
     2341 gggccggcca cgatggcgag gcgcaggcgt tggaccaggc acagctgcgt gagatcaccc
     2401 agaccatcct tgcgctgccc gggcaggtgc gcgagtgctt cgtgctcaat cgttacctgg
     2461 gcctgagcga gcgggagatc gccacgcgcc tgggaatctc caagagcctg gtcggcaagc
     2521 acgtgctgcg cgcggcgctg ctgatccagc agcaccagca gggagcacgg ccatgaacgg
     2581 cgattgccgt gggcagatcg cgcccgccgt tgtcacaaca ggaaagcgca cccgttcgcg
     2641 gtgcggcagg ccacaaccat gaccacgtcc gaaccctcgc cgcgtcaggc caggcaggcg
     2701 ttgcgctggg tgatccggtg cagtgcaggc ccgctgccgg aacgccagca acgaaccctg
     2761 cagcgctggc tgcaggccga tccgtgccat gcactggcct ggcgccagca gcaggccttc
     2821 tggcaggggc tggatgccgc cgggcccgag gtactggccg cgctgcccgg gctgaccgct
     2881 gatcgcgaag ggctgcggcc gctggcgccg cgccgccgcc tgccgtggct gctggcctcg
     2941 gccgctgcca tggtgctgat ggtcgccgcc gcaccgcacg cagtgctgct ggcacgcagc
     3001 gacctgcgca gcagcgatgc gccgcgcgtt gtgcagctgg aagatggcag caccgccgtg
     3061 ctggatgtcg gcaccgcgct ggccatcgac ttcaatggcc agcaacggca cctgcgcctg
     3121 ctgcgcggcc aggcctggtt ccaggtggca cacgaggccc gcccgttcca ggtcgaggcg
     3181 gcgggtggcc aggtgcgtga catcggcacc gcgttcagcg tgtcgatgca ggacgccacg
     3241 gtcaccaccc aggtcagcga gggcgtggtc gatgtgcgtc cgggcgatgg cagcatgcag
     3301 cgcctgcagg ccggacaggc acgcgcgttc cgtgacgggc gctggctgca gccgctgcgg
     3361 caggtcgggc cggatggcgt agcaccgtgg cggcgcggtg aagtggcgat cgacgatctg
     3421 ccggccgcac aggccattgc cgatctggcg cgctaccgcc gtgcaccggt ctgggtgctg
     3481 ggcagtcaga gtgcccgcgt gcgggtcagc ggcctgttcc acctgcagca cccggaaacg
     3541 ggcatcgatg cggtggctgc acaggccggg ttgcgcgtgc agcgcctgcc cggcggggcg
     3601 ctggtggtct ggtgaagacc ggttggcgca gcgctggatc ggccgcatga aaaaaacatg
     3661 aagaaaccgt gggcagtcgc cgcatgcggc tgtctataga ggtatagcca gagcgaaaca
     3721 ccgtttttcc tcaagccaga catgccaccg gcaccggatg tgccggcggt tccgccccgc
     3781 ttgaggagtt cctgtccatg ccgtccacgg catccgcctg tcaccgtcgc gccaccgtcc
     3841 tggccctggc catctacacc gtactgctgc cgttggccgg ggtgccgacc gcgcaggcgc
     3901 aaccggcggt cgtcgcgccg ctgcgccagt acgccattcc cgagcagccg ctggccgatg
     3961 ccgtgcgtgc gttcggccgc caggccgatg cccaggtggt gttccgcagt gatctggtgg
     4021 aaggccgtcg ttccagtgcg gtgagcggcg agtacagcca gatgcaggcg ctgcagcagc
     4081 tgctgcgcgg cagcggggtg cgcgcgcaac gcggcatgga cggcacctgg agcctgcgtg
     4141 ccgcagcgga ggcgggtgaa ggggaagggg tgcgggtgac cgagacactg gatgtggccg
     4201 gtcgcctgca gtcggagggg ggcgaggccc gcgatcggcg cggctacgat gatgtgttcg
     4261 cgctggacct gaccacggcg tattcggggc gcgaccgggt ggaacgctat cgcggctcca
     4321 acccggccga cgtggtcaag gatctggtcg gcgtgttcag tggcgatgcg cgcaacagtg
     4381 gcgcactgga catcaacatc cgcggcatcc aggggccggg gcgggtgccg gtcagcatcg
     4441 acgggggcga acaggcgttg accgtctggc gcggctacaa cggcgtcagc aaccgcaact
     4501 acatcgatcc caacctgatt ggtggcatcc aggtcatcaa ggggccaggg ctggtgcgcg
     4561 atgtgcacag cgggatcggt ggcgcgctgg tgatcaagac catcgacgtt gacgacattg
     4621 ttgcggccgg cgagcgcttt ggcggggagc tgaagatcga aggcagcagc aatgcggtgg
     4681 caccgcgcct gccgcggctg cataccggcg aggactaccg cacggtaccc ggcttcccgc
     4741 agggctcgcc gaactcgccc tatgacgacc gcaccctggt ggtgccggtg aagtcgcgca
     4801 gtggcaacaa ccccttcgac ggcgaggacc aggcctggcg cctggcgctg ggcgtgcgtg
     4861 gcgacaacgt cgacctgatg gccgcctatg cctggcgcaa gcgcggcaac tacttctccg
     4921 gcagcaaggg cagcggctac tacgaccagg acccgcgcga gaagtacgaa taccagggca
     4981 tcgactacat caccacgctg gcgcgttact tcaagccggg cgatgaagtg cccaacacct
     5041 ccagcgaaca ggaatcgtgg ctggtgaagg gaacctggca gatcaacgac gaccagcagc
     5101 tgaaggccac ctggcggcgc acgctgtcgc actacggcga gatcatgccc tcgcgcatcc
     5161 tgtccgcgcc agactatggg cgcatccagt ggccgctcag ccgcgtcgac tccgatgcct
     5221 ggaacctgga gtaccgtttc cagccagccg gcagtcgttg gctggacctg tacgccaacc
     5281 tgtggcgcac ggaaacggaa agcgacacct acaccgccgg tggctttccc aatttcgcgg
     5341 tgggcaaccc ggcatggaac ccggacgcca gcccgatcct gcgcaacacc gcgctggcca
     5401 acgcgcgcaa cgaccgcacg ggcctgatcc tgagcaaccg tttcgcgctg cattcgaccc
     5461 tggacctgac cgtgggcggc aactggcagt acgagaagct ggggtcccgc gatccgtact
     5521 tcggtaccac cgatggctgg cgcatgttcc cgcgtgccgg gcgtcgccag gagggtgaag
     5581 gctacctcac tctggagtgg cgcccggttg acttcctcac cctcaatgca ggtgttcgct
     5641 acagccgcta ctgggccttc gatgatttcc tcgaggcgca ccccgagctg ctgaccaagg
     5701 gcgtaggtgg caaggaagcg cagtacaccg tgaacgagtt gctgccccgc ccggcggacc
     5761 tgcagtcacg catcgatgca ctggaggcgc gccgcgccgt ctgggaaaag cggggcatgg
     5821 gctggttcat cgaccagagc atccgcaacc tactggcgcc gtacgagacc ccgcgcccgg
     5881 tgcaacacac ccggccctgg ctgcccgatg ccgatggcaa ctacacgcgc gcaggcaacc
     5941 cctgcctcaa tggtgaagtg gcggccattc ccggcgtgca gccggtgttt gccggcagcg
     6001 accaggtctg caacatcggc aacagcgtgc agtcgcggcc ggtggatggg cgcaacagcc
     6061 gccggcgcga ccatgcctgg ctgccgacct tctcggccac ggctcacctg tctccggccg
     6121 cgcgtgccta cgtgcgttac agcgaagcag tgcggttccc gagcatgttc gaaagcacca
     6181 tcgccttctc cggcagcctc aatccgctgt acgcgctcaa gcccgagcac gcctacaact
     6241 acgagattgg ctacgtgcac aacctgtcgg ccctgttcgg caacaccgcc gatgccgacg
     6301 tcaagctggc gtactacgtg cacaagaccc gggacgtgat cgagcgcgac ggcaacttcc
     6361 tgttcgacaa catcgacaag cagaccatcc gcggcatcga gctgcaggcg cgcttcgaca
     6421 accggcgctt cttcaccgat ctgggcatca cccgcacgct ggaaaacgaa gtgtgtgacg
     6481 agagcacggc ggtgctgctg gacgcgaacc gcggcctggt gccgaactgc gtgcaggacg
     6541 gcttcgtcgg tggctacctg ctgacccagg ccattcccaa gctgtcgatc aactggtcgc
     6601 tgggcacgcg cctgttcgat gagcgcctgg aactgggcag ccgcatcgtg cactaccagc
     6661 gccacgagaa ccctgacctg caggcctacc gcgaccgcct gctgagcggc ggcagcggcc
     6721 tgctctggca gaacgtgccg ttcacctggg gaaacatcac caccgtcgat gcctatgcgc
     6781 gctggcgctt caacgagcat gccagcgtcg aactggtcgg cagcaacctt ggcaaccgct
     6841 actacgtcga tccggccacg cggtccacgc tgccggcgcc gggtcgcacc ctgaagctcg
     6901 gcgtcaccgc gcgcttctga tctcccactt tcaagcgttg tacccgtagt tccctcaatc
     6961 aaggagcaat accatgaaaa tgatctcccg ttcggttctc gccgttgccg cctcgctggc
     7021 tctggtcggt gccgcgcatg ctgccgatat cgtcggtgct gccagtgcca agaccgatgc
     7081 cgagctgtac gtggcggtgg gcgaatcgca ggtcaatggc ggcccgcacc gcgctggcaa
     7141 ggccggtatc ggtgtcggca ccgtgtccca ggccaagccg gtggacttcc agggcctgag
     7201 cgcctactcg gcacccacca ccgtcaatgg cgtgacggta cgtaccctgg ccatgccgat
     7261 caccggcgca ccgggcagcc acgccggcat gggccacttc aacttcgtca aggtcggcag
     7321 tggcgatgtc tggttcggtg aatggtccaa ggatggcgcc gccggtggct tcaacaaccg
     7381 ccaggtctac ttcgtcggtg accgcgccgg caccacgctg cccgccggtg tggcgtccta
     7441 caccgtggct ggcctgaaca agttcaacgg cagcaacctg ctgagcggca cgttcgatgc
     7501 cgacttcggt gccggcaccc tggatggtgc actgtccggc aatggcctga acctggccat
     7561 cgttgccaac atcaacagtg ccgacgcatc gttcgccggt tcggccaacg tcaatggcag
     7621 cgtcaacggc accacccagg gccagttctt cggcgccaac gccgccaccc tggccggcat
     7681 cgccaccttc gccggcaaca gccagtacga caccgccttc ggcggcagca agaactgatt
     7741 gccacgcccc tgacggggca gggcagggac aagccgcgat ccgccagtcc ctgcttcggc
     7801 ccgctgcatg caccaccacg gatcgaccat gcgccatccc atcttccttg tgatcctgtt
     7861 gctggccgct gccgatgtgc gcgcccagca ggatgacctt cgtcgcgtgc ttgagcaggg
     7921 cagcgaactg cgccaccagc agcaggacca gcagcgcctg cggcaggccg agtcggagcg
     7981 gccgaccatc accatcgacg gccagaccct gcgcgtggag cgcaccgtcg acgatctggg
     8041 ccaggcgctg tacctgtcgc tgcagcatca gcaatggggc gccgcgcaac gcttcctgga
     8101 cgaatacatc gaactgcccg gccatgaccc gttgctgcgc cactatgcgc agggcggcct
     8161 ggcgcgggta gccggcaatc accgccgtgc ggccagcgaa tacgaggcgc tgctgcaggc
     8221 acaaccggat ttcctgccgg cgcgccttga acttgcgcgg gtctatgccg aagaccagcg
     8281 cgaccgcgat gccgtggcgt tgttcactgc catcgccggt ggcatcaatg ccgacgaccc
     8341 cgccaccgca ggtgtgcgcg gacgggtgga cgcctatctg gccgcgctgc aggcgcgcca
     8401 gcgctggaaa ggagcgctgg ccgccggccc ggcatggagc gacaacatca accgcagctc
     8461 ggccagccgc acctgcctgt tcggcgtggg cgagacctgc atcatccagc gcaatcttcc
     8521 cgatgcccaa cgcgcgatgg gcctggacta cgacggcaac ctggaacgtc gctgggcgct
     8581 ggccggccat catggcatct atgtgcgcgg gcttgcgttc ggccaggcct ggcgcgggca
     8641 cagcgcctac aacgaactca atgccagcgt gcaggccggc tacagctggc gcagcgcacg
     8701 gcataccctg cagatcgcgc cgagctatga ctaccagggc ctgggcaatc gggccctgca
     8761 gggcggcagc gggctgcacg gcgaatggca gtatgcgctg gacgcgcgca gcctgctcaa
     8821 gctggaggcc gactggaagc gccagcgcta tcgccagcgc ggcctggcca gcaattacga
     8881 cggtgagttg gctgcggtgt atgccacctg gttccgtgcg ctcaacccgc gctggaccct
     8941 cttcgccgga ctggacctga gtgacagccg tgccgccaat ccggccaacg gctaccgcca
     9001 gcgaggcctg cgcctggggg ccgcgcgcca gtggccgggt accaccgcca ccgtgttcgt
     9061 ttcattgcgc gagcgtgact acgatgcgtg gagcccgttg ctggaggcgc ggcgcgagga
     9121 cagcgaacag aacctcatcg ccatcgtgcg cagcgaacgg ctggcggtcg ccgggctggt
     9181 acccagcctc agcctgcgtt acgcgcgcat cgacagcaat gtcggctggc tgtacagcca
     9241 cgaccgcagc ctgctcagcc tgaagtggga gcgcgcgttc tgaggtagag gccggcagta
     9301 ccggttcttc attgatcgtc acgcgctctt gtaggccgga tcgcgcatcc tgccctcgtt
     9361 gcgaccgcag gcgggtcgcg tgcatcgagg agtgcagggc gtgctggaag ccggtaacaa
     9421 accagagggc ctgaaagggc tgcgcgtgct ggtggcggaa gatgaattcg ccatcgcgat
     9481 gttcctggtc gactacctgg aactgaaggg cgcacaggtg attggccctg ccggtgacct
     9541 gcaggcattg gggcggctgg tcgataccca tccgatcgac gtcgcattgc tcgacatcaa
     9601 tctcggcggc gaacaggtct atccgttggc cgatcgcctg gcggaggcag ggacgccgtt
     9661 cctgctcacc tccggctacg acgacaacct gccgagccgt ttcgccgcgg ccccgcgctg
     9721 caccaagccc tatcacatcg aggccctggt ccagcagctg gccgggcttg tcgctgcacc
     9781 gcaggcgtct gcgggcatcg cctgaccggg ccgtatgggg cgccgtatcg aagggttcca
     9841 taccgccgac cggcaggccg gcatgccgcc ggcgctgcgg ctgcacgcac gccacgacgg
     9901 gatggccgcg cgcattgccc ggcatgactg ggcgtcgacc gcgctggggg ggatggaccg
     9961 ctggccgccg cacctgcgcg ccacggttga tctgatgctg gcccacggct tcccgatgat
    10021 cgtgctgtgg ggcgagcagc tggtgcagct ctacaacgac ggctatgccg agatcctcgc
    10081 cgacaggcat ccggccgggc tcggccagcc gacccgcgag tgctggcccg aggtctggca
    10141 catcaatgga ccgctctaca cccgggtctg gcagggcgaa accctcacct tcgaggacaa
    10201 gctgtatccg ttggccaggc acggccgcct ggaggatgtc tggttcacca tcacctacag
    10261 cccgatccgc ggcgaggaag ggcgcatcaa cggcgtgctg gtgacgatgt tcgagaccac
    10321 cgccgcgcat ctggcgcagg ccgcgcgcga gcgcgaagaa ctgcgtcggc gcgagagcga
    10381 gcgtcgcctc gagctggcct tcaggatgct gccggtgggg ttgtgcattg tcgatctgga
    10441 cggtcgcatg ctgttgtcca acgaccagat gcgcgcctat ctgcccaccg gcaaggtgcc
    10501 ctcggccgat gcggacaacc agcaccgctg gcgaggctgg cacaccgacg gcagcgcgat
    10561 cgggcccaat gatttcgcca ttgccagggc gatgcgcggt gaaaccgtgg tgccggggct
    10621 ggagttccag tacctgcatg acgacgggcg cgcgcgctgg acacgggttg ctgccgcgcc
    10681 gctgcgcgat gccgatggcg aggtcagcgg cgtgttcgcc attgccgtgg acatcgacga
    10741 cctcaagcgc gccaccgagc gccagtcggt gctgctggcc gaactgcagc accgggtgcg
    10801 caacatcatg tcgaccatcc atgcccttgc ctggcgcacc cgcgcgtcgg tcggcagcgt
    10861 ggatgaatat gccgagcgcc tgtgcgggcg cctgatgtcg ctggcgcgca cgcagagcct
    10921 gctgacccgc ggcgccaatg ccggggtctg cctgcgcggc atgctcaacg aggaaatcgc
    10981 ggcggagacg ccgtcgatgg ccgcctactg cctgcagggc gaggatgtgc tgctgccgcc
    11041 caaggccgcc gaagtgctgt cgctggccat ccacgaactg gccaccaacg cactccggca
    11101 tggtgcgctg agccatgaca gcggccgcgt cgaggtgtcc tggcatctgc aggtacagga
    11161 tgaacacccc tggctgggcc tgcactggtg cgagcgccat gccgaagtag agggctgggc
    11221 gctgccccgg cagcgcggcc taggccgtac cctgatcgag cagcgcgtgc cgtatgaact
    11281 ggccggcact ggcgagctgc gcttcagccc gcaggggctg gatgcctgga tccggttccc
    11341 cctgcgcgag cgcgacagcc tgctgcagac cgatgcgccg cagcccgggc cggcccggtg
    11401 aaacccggtt tatccccaat ttggctaaat tgggtatagt ggccatagtc cacctctacc
    11461 cggagctgtg ccatgaccct gccgctggat ctgcccggcc ttgaaaaggc cccggcctcg
    11521 tcggtgaaga cccgcggttg gccgagcctg atgcgcaccg tgcgcgagaa gcaggcgctg
    11581 gtcatcacca accacaacca ccccgaagcg gtgatcgtgg acatccgcac ctatcaggaa
    11641 ctgctggcca aggccgccgg cggtgatgcc ggtgagcgca gcgaagagct gatgcgcctg
    11701 cgcagcgagt tcgaccacac cctggccggc ctgcagcgcg gcgaggggct gggcaaggtg
    11761 ctgggccagc cgatccgccg cggccgcaag gtcaccctcg gccgtccgct ctgaccgatg
    11821 gggcggatcc tggtgctggc cggcgtcaat ggcgctggca agagttcgct gctgggtacc
    11881 tggctggagg ccgaagggct gagctggttc aacccggatt cgttcacccg gcgcctggtg
    11941 gaggctggct ggccgctgcc cgaggccaac gccgaagcgt ggcaggaagg cacccgtcgc
    12001 ctgcgccagg cgatggccga cggcaccgac ttcgctttcg agaccacgct gggcggcaac
    12061 accattccgc gcctgctgcg cgaggcctgc gaacggcacc acgtcgcgat ctggttctgc
    12121 ggcctggccg atgtcgaact gcacatcgcc cgcgtggccg cgcgggtggc agccggtggc
    12181 cacgacattc cggtcgagaa gatccacgcg cgcttcgatt ccgcgcgcga gaacctgctg
    12241 gacctgctgc cgcacctggc cgaactgcat gtctacgaca acagcgcccc ggccgatgcc
    12301 gagggctgtg tcgaaccgct gccggtgctg gcgatggcgc agggccagct gcaatacccg
    12361 gtgtcggtgg ccgaactgct gcacaccccg gactgggcca agcccatcgt gatgcgtgcg
    12421 atggaattga acgccgcacc gtagatccac gttattcgtg gatcgcgttt cgcgcccagc
    12481 ctcaggccgg cttcacctgc tcgggctccg caacgtcggg caacggcggc aagctcgggt
    12541 ccaccgtcac cggcacgtcg ctcttcaaca gcgcggccgc ttccttgtcg ctgcccaccg
    12601 ccggcggtga accgcgcagc ggcaggccgg cggtttcctt tacgaacagc atggtgacca
    12661 gcccgatcac cgccgcaccc atcaggtagt aggccggcac cagcggatcg ccggtacgct
    12721 ccaccagcca cgcggtcacc agcggcgtgg tgccaccgaa cagcgacacc gacacgttga
    12781 aggcgatcga caacgcgctg tagcgcaccg gggtatagaa cagcgccggc agcgtggacg
    12841 gcatcgaact ggtgaagcac accagcgcca ggcccagcag catcaggccg aggaagatca
    12901 tccagtcgtt gccgctgcca accagcagca ggcacggcac cgccagcacc agcagcgcga
    12961 tgcacgcacc gatgatcatc gggcggcggc ccagcttgtc actgaacagc ccgccgacga
    13021 tgttcagcgg catcattacc agcatcacga tgatgatcag cagcaggccc ttgctctcgg
    13081 cgtagcccat ggtgacgctg aggtagctgg gcatgtaggt cagcagcatg tagtcggtga
    13141 cgttgaacac cagcaccagc cccatgcaca ccagcagctg gcggccgtgc acctggaaca
    13201 gcgcgcccag accgggccga tcatgttcgc gcttctcggc ttcctcggcg aaggctcgga
    13261 atgccggggt ttcttccagc ttcatgcgca tgtacaggcc gagcaggccc agcgggccag
    13321 ccaccaggaa cggaatgcgc cagccccagt ccagcatctg ctcgctgctc aacagcatgt
    13381 gcagtgcggt cactgtgccg gcaccggcga tgtagccgcc cagcgtgccg aactccagcc
    13441 agctgcccat caggccgcgg ttgcggtcgg tggagtactc ggcgatgaag gtggccgcac
    13501 cgccgtactc gccgccggtg gaaaagccct gcaccacgcg cgccagcagc aacagcaccg
    13561 gcgcccagat gccgatgcgc tcgtaggagg gaatcaggcc gatggcaaag gtacccagcg
    13621 ccatcaggat catggtgaac gccagcactt tctggcggcc gtaacgatcg cccagcgggc
    13681 cgaacaccag gccgcccagc ggccgcacca ggaatgccac ggtgaaggtg gcgaaggccg
    13741 cgatcacctg tgcggtggga ttgctggagg ggaagaacac ctggccgatg gtgacggcca
    13801 gatagccgta cacgccgaag tcgaaccact ccatggcatt gcccagtgca gccgcgccga
    13861 cggcgcgctt gagcatgggc ttgtcgacaa cggtgatctc atcgaccttc aggtggcggc
    13921 ggcgtttgaa ccagccgaaa tgggcatgtg aatcgggggt gtcctgcatg gaggctccct
    13981 gtcaggtggg ggaatgagcg atgggtgtgt tccggaaaca ggtgcaggcg cggtgccacg
    14041 cgcacggcac ggcaccgccg caggggcgga aacacggaaa cgggatcacc gcggcggcgc
    14101 agtcagcggc cgggtgtcac atcagcgtgg ggaatgcagg cagaagggcc tgcgggcgtc
    14161 agccgccagg atccagcgcg aggcgatgga aatgctgggc gggaacatgc gtggcaagcg
    14221 aagcgccggt cggcagtgct tcccacgtaa caggtgcgcc cgtcacgtag tgggtcgtgt
    14281 cgatcatccg ttcatcataa cggcatcggc gtgagcgtgc agcgaagcag gctgagctgc
    14341 acgctgtgtt ccatcacgcc tgttcatgtg cagcgcgtct gcgatgacat gcgttgaacg
    14401 aactgtggcc gcgctgctca cgcacagctg gctacggtgc aggtgaacgc actccacaag
    14461 gaacatcgca tgacccgtcg cattcccgaa ggcaccctca tcatcgtcgc cgatggcggc
    14521 tctgcccgcg tgttcaccaa cgttggcaac gagcatcaac tcagcttgaa gcaggaaggt
    14581 gagctgcgcc tgcaggacat cagcgagcag ggcatctcgg ggcaggggcc ggccggcgcg
    14641 gtgccgaaag acatgtcaat ctcgcagctc aatgaagcca ccttcgccaa gcaggtcgcc
    14701 gagcagctca acgacgatgc tttgaacaac cgctacgcgc atctggtgct ggtggccgac
    14761 ccgaccacgc tgggccgcat ccgcccgctg ctgcacaagg aagtgcagtc gcgcctgctg
    14821 ggtgatatcg ccaaggatct gaccaacgca ccgttggccg atatccagaa gtcgctggcg
    14881 gcgtaacgcg catgccgttc atgcgtgatc acctctcggc agagccggcc cgtgcggatg
    14941 tggaagcaca gccgggctgg caactgctgg agttcggcgc accgtggtgc ggccactgcc
    15001 aggccgcaca ggcggcattg cagtctttcg tcgatgccaa cgatctggtg cattggaaaa
    15061 tcgaggatgg caagggcaag ccgctgggcc gtgcgttcaa ggtgaagctg tggccgaccg
    15121 ccgtgctgct gcatgacggc cacgaggtgg cacgcgtggt gcggccactg gacagtgccg
    15181 acctggcagc cctgcagacg gcactgccgg attgagtgca gctaggcgcg cggctagcgc
    15241 aacgggtaga acggctcgat catctcggtg ccggtggcct catcgccctt gaacgacaac
    15301 tcgaaggcgc caccccacag cgtttcgggg tggtcgagca cctgcagggt ttccatgcgc
    15361 aatgcctgca gtccaatcag atgcgcggct tcgtcgcggc tcacccagcg atactgcttg
    15421 tccgcggtgg tggcgggcgg atgcccactg cgtagcgagg cacgatagtg ctgccggaac
    15481 gacaccgcgt cgtgcgtcgg gtcgggcggg tcctcgttga aacgatagct gtagacggcc
    15541 gccagcgcga acggtgacac ctgcaggcca agctccgttg ccagctgccg cagtgcttcc
    15601 tgcacgctct gcttgcggtt ggcgcgtacg gcaggcgtca tccagccact gcggttgtgt
    15661 tccagcagca ggcggccctg atcgtcggtg accagcaggc gcaggatggt gtagtcgtcc
    15721 tgcgcggtgc gcgcaacggc gggtggcggt gggggcggat cggcatggac agcagaggcg
    15781 gtggcgatca ttcctgcaat cgcgatccat cgtgcagcgc ggcgggccat gcggggtctc
    15841 cctggtctgg gcgcagggta gggcggccca gggtggcggg caagtgccgg ctcaccccac
    15901 tcgggctcag tgaagggtca ccttctccgc ctcctcgcgc agcgcctgca gcaggcagcg
    15961 cccgtgctgg ctcagcatga tcatcgccgt ggcgatctgc ttcgggttgt agcccatcgg
    16021 cgcgggcggc ttcggctcgg ggccatactg ctcgccgatg aggatagcca tgccctcggc
    16081 gctgttgaag gcctgttcga tgcgatggag cagcgattcc atggccgggc tgagcggacg
    16141 ttcgtggatc atgcgggaac tccctgggtg tgatggccac cgcgagggtg gcgggcagtg
    16201 cccgtcgcat ttatgacgag cgatgtctgt ccctctttct tttcgggggt tccaatcccg
    16261 gcagcggtat gtccgctgcg gcgccatcct gcacaggcca tggcgcgacg cgccaattga
    16321 tgtgtcgtct tgtttcgtcc tctgcaaaag gcgtggtctt tcagatggga ggttatggac
    16381 aacaattgac gcatagcagt cagctggtga agaggtaggc gataagccta tgagccgatt
    16441 cgtcgcgcgg ccatgcaatt aagtgcaaac ctgcgcgcca atcccgacgg ccgcactgca
    16501 gcatgcgaca tggcgatacc ggtgctagca tccggccatc gcctgaatcg atccaaatgc
    16561 cgatgcccac gctggaccgt cgtttcctga tcgccgttgc cgccactgcc atgctggctt
    16621 ccggtgccgc gttggccgcc acaccgaaat cacccgccga gcgcgcctat gcggcggtcg
    16681 acccgttcat cggtaccggc ggcgaaggcc acacctatcc cggtgccacg gtgccgttcg
    16741 gcatggtcca gctcagcccg gacacgcgca tccagccgcg cgagaaggcc tatggctggg
    16801 ccgccggcta ccgctacgac gacagcagca tcgtcggttt ctcgcacacg catttttccg
    16861 gcaccggcca ttccgatctg ggcgacatcc tgctgatgcc gttcaccggc acaccggggc
    16921 tggagcgcgg cgatccggaa aagccccgca gcggctatgc ctcgcgcttc cgccacgacg
    16981 atgagaaggc cgagccgggc tattacgcgg tcaccctgga tgattacaag gtgcgcgccg
    17041 aactgaccac cagtgcgcgc gtgggcgtgc atcgctatgc gttcccgaag ggcaccgagg
    17101 ccaaggtgct gctggacatg cgcaccagca tgtacgacta cccgggcaag gtgctgtggt
    17161 cgcgggtgcg ggtgcgcgcc gatggcacgg tgaccggctt ccgcgaaacc cgcggctggg
    17221 cgccgggccg ccagctgtac ttcgcgatgc gtttctcgcg cccgctggcc gggcatgaac
    17281 tgcacaacac cgagcaggac atcgtctaca agggcttccc gccgccgggc gagaaggacc
    17341 cggcgcagcg tgcgcagatc gagggccgtc agctgttcgg cacgttcgcc ttcggcaagc
    17401 tggacgcacc gctggtggtg aaggtggcca tttcgccggt cagcgaggcc ggcgccatcg
    17461 ccaacttgga tgccgaagtg gcggacttcg atttcgaccg cgtgcgcgcg caggccaagc
    17521 aggaatggac gcaggcgctg tcggtgctcg atatcgaggc accggaacat gcacgccgca
    17581 gtgcctacac cgcgctgtac cacacgatgc tggggccgac gctgttcatg gatgccgacg
    17641 gccggtaccg cggctcggac aacgccgtgc acaaggcaga gggctacacg aattactcca
    17701 cgttctcgct gtgggatacc taccgtgcgc tgcatccgtt gctgaccctg gtgcagccgg
    17761 agaagcgcaa cagcgacttc gtcaattcca tgctcgccca ccacgagcac agcccctatg
    17821 gcatgttgcc ggtgtggtcg ttccacggcc tggaagactg gtgcatgatc ggctaccacg
    17881 cggtgccggt gatcgccgat gcgtacgtga agggtatccg cggcttcgac gccgacaagg
    17941 cgctgaaggc gatggtcgag accgcgaact acggtcccta tgacggcatc gcgcagtacc
    18001 gcgagctggg ctacgtgccg atcgacgagg aaggcgaagc ggccagcaag acgctggaat
    18061 acgccttcga cgactggacc atcgcgcgca tggcgcaggc catgggcaag accgatgttg
    18121 cggccacctt cgacaagcgc gccggcaact ggcgcaacgc cttcgacaag gacaccggct
    18181 tcatgcgcgc gcgcaagcgc gatggcagct tccgcacgcc gttcgacccc agcgccagcg
    18241 gctacggcac cgactacacc gaaggcaatg cctggcagta ttcctggtat gtgccgcagg
    18301 acgtggccgg cctggccgct gcacatggcg gcagcgacaa actgcttgcg cggctggacg
    18361 aggtgttcaa cgccaaggtc gatccgtcca tcttcgagca catggaagac atcaccggcc
    18421 tgatcggctg gtacgcacat ggcaacgagc ccagccacca cgtggcctac ctgtatgcct
    18481 atgccggcca gccgtggcgc acgcaggcgc gcctgaagca gatcatggac acccagtacg
    18541 ccgatcgccc cgatggattg gcgggcaatg atgacgtcgg ccagatgtcg gcgtggtatg
    18601 tgttcaccgc gctgggcttc tatccggtgg caccgggctc gggcgaatac atcctgggcc
    18661 gtccgttcct gcccaggacc gcgatgcgtc tgccgagcgg caagaccttc accatcgtgg
    18721 ccgacgggct ggacgacaag cacacctacg tgggcagcgt gagcctcaac ggcaagccat
    18781 tggagcgcac cttcctgcgc cacgacgaga tcctggccgg tggcgaactg cgcttcagca
    18841 tgcaggccga gccgaacagg gactggccgg ggcagggcgc gcaggcgccg tattcgatga
    18901 gccggtgatg cgcactgtgt cgacatgggg cgatccccgc ttctggtagg tgccaacctt
    18961 ggttggcacg cgggaggtca acatcgccaa ccaaggttgg cctctaccgg aacccgatcg
    19021 ctgcgggccg tgaatgtccg cgatgtatcg cccggatacc tgtcgcgatc tgcatgattt
    19081 gtcgagtgcg gatcaggatt cagcggaagg attcaccccg gaatcggcga cgcagcatcg
    19141 ccgtcgggcc gttccaggcc acattcatag cattctgatt tcaccccgct catcccgttg
    19201 ctagggtcct gcgcacagaa gtgcgccagg gtggtgcacg gggtgtaggt catatgcaca
    19261 cgttgcatgc gcatgaggat gcagcgctgc tgcaccggtt tgaactgccc ggcgcagggt
    19321 ctctgctggt ggagcgctgg cacggacgcg aagcactgtc ggaaggtctg gattaccaca
    19381 tcgatgtact tgcggcgcac gcggatgctg cctgcgaaca ctggctgggc cggcctgcaa
    19441 cgctgcacac gcgtgatgcg caggggcgcg acattccacg ggcagggctg gtgcgcgagg
    19501 tacgtcggct ggacggcgat cgggaattca cccgctaccg tatacgcctg gcggcatgga
    19561 cctggtggct gggccagcag cgcaacagcc gcgtcttccg tgacgcaacc gtcaggcaga
    19621 tcgtggatgc cgtgttcgcc gagcatcagg caggtgcctg ctggcactgg agcgatgatg
    19681 cacgggcccg cctggacgcc ctcccgccgc gtcactactg cgctcagtac cgccagtcgg
    19741 atatggattt cgtggcctgc ctgttggccg aggaaggcat cggctggcgc gttgaggcgg
    19801 atgcggaggc gcccgcgctg catcgcatcg tcctgttctt cgacagcgtg gccttgccgc
    19861 aggatccgct gtcggcacgc gacggtgccc tgcgcttcca ccgcggccac gcggccgagc
    19921 aggaagacag cgtagtacag ctggcccggc atgcgcggct tggcccgcga cggttgagca
    19981 tggtcagcga tgactttcgg caggaccgta ccttggccgt ccagttgccg atggacggcg
    20041 gcggtcattc gcctgtcgag cagtatctgg tgtgcggcgc ccaggccttt gagtcgcatg
    20101 cggaggccga gcggcgtgcc gcgcttctgg ctcaacgcca tgaagcggag cggcagggat
    20161 ggcagggcat tgccacggtg cgctgcctgg ccgccggcac atggtccagc atcagccaat
    20221 ggtcgccgca gcaggtgccc gagctgctgc tcacctcggt ggagcatgcc ggggtcaaca
    20281 ccttgcccgc gcggctgcgc cagcatcgtc cggagcacgc cctgcagcgg gatgggttcc
    20341 tgcccgacgc gctgcagcgc catgcccagc agttgggcta tgcggctgca ttccatgccg
    20401 ttgaccgcca gcgcccctgg cggccgcgcg caccggagca ggagggcgaa gcccaggtgg
    20461 tgggccggca gacagccatc gtgatcggtc ctgacgatcg caccggggta gccgaaggcg
    20521 atcaggtgca cgctgacgcg ctcgggcgga tccgcgtgcg ctttccactg atggatgcga
    20581 ccggcaggcc agcgcacagc gcatggttgc gcgtggcgca gcggtttgcg ggcccgggag
    20641 tcggaagcca gttcctgccg cgcgtgggcc aggaggtgct ggtgggcttt ctgcaggggg
    20701 acgtgcaacg cccaattgta ctgggcgccc tgtacaacgg gcgcggcgag aacgacccag
    20761 cgctgcatgc gcaggcctgc gatacgcgcg tcggcggcac cggcaacctt gccggtggca
    20821 atgcaccggc ctggcatgcg gcaggcgaag gcgagcaggc gcatcgccat cctggcgcgc
    20881 tgtggggcat cagctcccgc gaatggggtg gtaacggagg ctccacgctc cagttcgacg
    20941 acaccgacga ccagctccgc ctgcagttgg ccacgacaca ggccagcacc caattgaacc
    21001 tgggccacgt catccatcag cgcggcaatt atcgtggcag cctgcgtggg cagggtttcg
    21061 agctgcgcag cgatgcggcg ggcgtggtgc gcagcgagcg cggcctgtgg cttggtgcgt
    21121 atccggcagg ggctgcccag cccgcaggta cggcggtgca ggccggcgcg ttgctggccc
    21181 agtgtgggac gctggccgct gcgttcggcc aaagcgctcg cctgcacggt actgccgggc
    21241 tacatgcgtc gactgcgttg atacccctgc gcgatgcggc aatgggcgtg gttgcggccg
    21301 atgacttcgg ccaggcgcat gttgctgccg gtgacgcagc tgcagccggt ggtgtcccgc
    21361 attgcacggc acccctgctg ggcatggtgg cgccacgcaa ggcgctggtg gcggggcagg
    21421 ctgtgttctg gcaggccggg caaagcctgc tcctgggagc aggcgctgcc gggcaggccg
    21481 tggtgaaagg ccacgcgcgg cttcacgcgt cgcagtctgt cggcgtgctg gcttcggcct
    21541 ctgcttctgc atcgcggtgt ccgtccggca tgaccatcgc tgccggcgag cagccggtcg
    21601 acatccaggc gcagagcgac gcggtaaagc tgcagtctcg gcaatcacag cacctggcca
    21661 gtacgcatgc agcaattgaa ctggccgcag gacgtgcgct ggtggtgcag gtggaaggcg
    21721 gcgccaatct gacgatcgaa ggcggcaaca tccagttcaa ctgcccggga accctgacgg
    21781 tgcacgcggg ccaacacagc ttcatcggtc cggcgtcgct ggcctatccg ctgcacacgc
    21841 tgggcgccgc accctgccgt gcccgcttcc ttgtacgcga tcacgccggt gcaccgctgg
    21901 tgggggcggc ctactcgatg caattgccgg atggccgctg gctgagtgga aacaccgacg
    21961 gcgacggact caccgaggag gtcgtcaccg atggcccgga gaaggtgggc ctgttcgtgg
    22021 atgacgaacg gcacgaaggc tacctgcgcg atgcagacaa cagctgagcg ggtcagaaga
    22081 aaggaatctg gtacatgagt tctggaaagt tcaccctgtt ccgccatgac gggcatggca
    22141 acgtcgtgcc ctgcgcggac gtcacctatc gtatccgtga tgtactgcat ggcttcgccg
    22201 tcgtggcatc cggcacgacc gacagccacg gcgacaccga tcctgtgacg ctgccggagc
    22261 gagcgcagac cccggcgcca ccggtccttc ccggctggcg cagaggctgg ccgaacctcg
    22321 gcccggggcc ggccggcctg aagctgccct ggccgcggcg caacgtgccg gacgcagctg
    22381 ccggggccgg gcagggcgcc cgcctgccgc acagtgaaca tcgataccag ctgcaggtcc
    22441 gcgatgacgc cagcggcgag tggaccgatc cgctgctgca cccggactgc catgagcccg
    22501 cgcagctggg cccctggagc gaagatccac gggccgaagc ttcgctgcgg cctgcattgc
    22561 aggtgcggcg gctgcggttg cgaccgttcc accagctgca gttgcagcgg cagagcccgc
    22621 caacaccggt gccggaggcc ggctttgtgg gctaccgccg cgaccgcgat ggaactgagg
    22681 tggtcgccct cgacgtgcac gggcggccgg tccgtggcgt aacggatagg cagggaatga
    22741 ccccgcgcct gttctgcgaa caggatctgc ggctggtgtt caccctgccg ggcagccgca
    22801 gcgaactgcg cagtgcgctg tccgagccac gggtcgtcgg gcaaccgcgc ctggtgccgg
    22861 tggtgccggt gaagatgcat gcggtggtga gcggccccgg cgaaggcgcc acgctggagc
    22921 tggccgggaa gatcagtgca ccggcgctgc tgaacgtggc cgacgaagaa ctcctgctgc
    22981 tgacccccga ggtctgggag gagttccgcg aggttgcgcg atccattgaa ggcagcctct
    23041 cagccgtgcc gcgcgcccgc tggcaactgg aggaggcgct ggccggccgc agcctggaag
    23101 cggtggccca ggccgagaag aacctgggca tggccgagga ccgtgcagcg gccatgctca
    23161 acggcacctt cgcgcgaaag gccgatctgg tcgaagtgat caccttcgag agctacagcc
    23221 gcaaagggga cggcggggcg cagcaggagg tgggccttcg ccgcaactac ctgccgcggt
    23281 tcaagtacga cgagttcaag gggcgccggg tgatgggcgt gcccacccat gtagatctgg
    23341 gaatgtcgac acgcgcgggc gacagcgcga tgtccgtggg cagcgcggcc cggcagaagg
    23401 gtccggcctt ccagaacttc gattcacgca agttcatgca gtcgctgatg acgatcaagg
    23461 cccagatcgg ccggagcgtg aaggcgccga acatccagtt cgaccttatc gagctgggtg
    23521 ggaaccagtt ctccgagctg gtgcgcgcgt cggagaccta ctcggtggag acctccgcgc
    23581 agtggctgcg gtttgtggcg ggtgccgggg ccagtgccca ggccgagtgg gatccactac
    23641 accgcaaggc cagtgccaag gtcgatgcgg gtgcacatta caaactggcg ctatttgaag
    23701 caaaggccgt gcatacgtgg tcgattccct cgcgtaccgg gtggatgcag cgctacggcg
    23761 atatcgacct gggcgcgatc gtattccaga tgtcgctgga actgcacggc tttgctggcg
    23821 tgaaacgggc gttgatgggc gctgccggcg tgagcattga tcgtggtgct gccaaggtcg
    23881 aggcgcagcc gcgcgatcgt gacgacagct tcgtgcccag cttcgacatc gtgcgcggca
    23941 tgccccgggc tgacatgggc gatccaccgg acaaagacgg ccggccgtcg agacgggtcg
    24001 tgatggctgc ggtgggcgag aagccgccgg agagcctgaa tggcatgcgg gtgaatgccg
    24061 aggcgtttgt gggtgttgag gcgggcttga cgcctgcggg tgaattgcaa tggctgccgc
    24121 cccagcaggg aacaccggtg acgcttgcga agctgagctt ggatacggcg ggttctgcgg
    24181 gcgtgggcgc caaggcgcag ctgtatgtgt actacgcgaa gggacgtttc aggatcaagg
    24241 tcagtgcgcg gttgtgcctg ggcattggct gcaagggggc gctggatttc gtggtgggag
    24301 tggagggaat gctggagttc gccaagtggg tgtattacca gttggcacat gctgggttta
    24361 aggagttgat gttttttgca gatggagttc tagagtatct ttcccagttg gtgttcttgg
    24421 taacttccac tgaaggatct gccgaaaagt ttcttatcca gaacatcgac cgcgcaaagg
    24481 tcactgtcat tgacaaaatc cgacaagttc agattgtgca gaatcgtatt gaactagtcc
    24541 ggagagtaaa ttcttccgcg ggatatgcag gtcgcaaagg cgcatggctt atttatgcga
    24601 caccaatgac tcgcgggatg cttctttacg ccattacccg ccacaactgg atgactcata
    24661 tgagtaatcc ggcgcaggtc gaaggggtgt tcgatccgca gatgcactac cttcctgacc
    24721 acaagaaggc cattcttcgc gtgataaagg gcattactct tgccagtgag tgggatgcca
    24781 tgttccggca catgactgaa caaggtgagc ctagtagcga accacctggc aagcttgagg
    24841 gggatgtggt gagattcctg aactacggtc attcgttgtc cggcgatctc aaaggaaagg
    24901 tttttgagcc aatcaatacc gacggtgatg caccttcaga agggatggga agcaactacc
    24961 ttgagcaatt tcttgcacat cgcaggagac tgcttggtag ctttccaaag ggttatgagg
    25021 tggcgcagtt gcagcggatg gacctcgatg cactcctggc gcttgacggc agggacgcgc
    25081 ctaccttcgc aagccttgat ggcgactacc tccgttcccg ggatcaggaa caacggcttg
    25141 ttgctttact tggtctcggt ggctcgcctg caaacgcatc gtagtttgca gacggagccg
    25201 ctccaaaggt gacctccggc gaaaggcggt tgcttcatcg cttcagctgt tctttgagct
    25261 ggaagaatcg gcggctgcgc agcggaatcg gttaaagccg ttgggattga acagtcgcct
    25321 cccttcctcc gagagaaggg gatcgggacc aggggccggg tcgttcttga agcgagtgaa
    25381 cgtcatcgat acgatgaaaa gggcgcttcc gccctgattg ctgtgacttc gctggacctt
    25441 ttcatcgcca tgcgcgggtc cgcgggggtc ttgtatgtcg gaaatgtcat aaggatcccg
    25501 ataccagtca aagacccact caaacccgtg gtcaatcatg tcgtaaagac ccagtggggt
    25561 gggcggatac tgacccagag gggttgggcc gatcgtatag ccatgcttgg aggcgtacgc
    25621 gcggaccgtc ttgtaatccc caacattcct cccatcgtcg acgctgccat catcggtcgg
    25681 ccagattacg aactggcccc ggttacgcgc cgcgtactcc cactgcgcct ccgtcggaag
    25741 ctccatcttt cgcccaatca gctctccgac ccatccacag tactgctgcg cggcctccca
    25801 gctcacgccg accggtagat cgtccggcag gttccgatac tccagatcca tcgggtactg
    25861 cgcggtccgg ggctggcccg ttgcatcggt atagacgtcg aagtcggcgt aggtgatctt
    25921 tttggcgccg agtgcgtagc tgctcagcgt tacctcacgc agtacgtcgt cgtcgcgctc
    25981 accgctgtaa ggcatcttcg cgcgcggatc gatggggccg aaatcaccca tgatgaaggt
    26041 gccgccttcc acctccacca ggtctttttt ggtcttttgc gacagcgctt cgatgcgcgc
    26101 tgtgagctca ggagagtgct tctggggcgc tttgacggtc gagccttggc acgccgtcag
    26161 cagaagtgct gttggcacaa gtgatttcag aaggacgggt cgaagaggcg gcatgagaat
    26221 caccgatcag ttctggatgg actgaatcag cgtagcaatg cctggataca gggggcacta
    26281 gtgacaggga tgaggggcgt gaagcggtgc ttcccgaagg acgcggagac gcgtctgctg
    26341 cgcagcggaa tttgtttgcc cgattggggt tgaactcatg ccttgcatct tccggaaggt
    26401 acagatcggg gccaggatca ggcggcgctt ggaatcgcgt aaacgtcatc gacacgatga
    26461 aaagcgaatc tccaccacga tcactgtgac tccgttgcac cttctgctcg ccgtgcatcg
    26521 gtccgcgtgg atcattgacg tcagagacat cgtacgcatc ctggtaccag tcatagaccc
    26581 actcgaagcc atgatcgatc atgtcataca agcccagtgg ggtgggcggg taccggccca
    26641 gaggtgccgg cccatttgtg aagccgtgct gggatccgta gcggtttatg gttttgtaat
    26701 ccccaacatt ccgcccattg tcgacgctgc catcatcggt gggccagatc acgaactggc
    26761 cccggttacg tgctgcgtac tcccactggg cctccgtcgg aagttccatc ttgcgtccga
    26821 tcagctctcc gacccatcca cagtactgct gcgcggcctc ccagctcacg ccgaccggta
    26881 gatcgtccgg taggttccgg tactccagat ccatcgggta ctgcgccgtg cggggctggc
    26941 cagttgcatc ggtatagacg tcgaagtcgg cgtaggtgat cttcttcgca ccgattgcgt
    27001 agctgctcag tgttacctca cgcagtacgt cgtcgtcgcg ctcaccgctg taaggcatct
    27061 ttgcacgcgg atcgatgggg ccgaaatcac ccatgatgaa ggtgccgcct tccacctcca
    27121 caaggtcttt tttggtcttt tgcgacagtg cttcgatgcg cgctgtgagc tcaggtgagt
    27181 gcttctgggg cgttttgacg gtcgaacctt ggcacgccgt cagcagaagt gctgttggca
    27241 caagggattt cagaaggacg ggtcgaagag gcggcatgag aagcaccgat cagttctgga
    27301 tggactgaat cagcgtagca atgctgccgc aaggcgcgtg gcggctccac ggctcaggca
    27361 tcgcgccagg tgcagccggg cacggctggt cgcttcgtaa tcaagggctg ccgatgggca
    27421 gcgccaacca agattggcgt ccaccgatat gtcccgctac ggtcgcagcg gatgcccacc
    27481 aaggtgggca tctaccggga gcgaaaccgc aatccgaccc gcgcgccgcc gatcggggcg
    27541 gtatcgatca ccaatgccgc accatgccgc tgtgcgatct ctgccacgat cgccagcccc
    27601 agaccgcagc cgtcgccctc gctgctggcc cggtagaagc gttccgtgac acgcccgcgc
    27661 tcggcctcgg cgatgccggc gccgtcgtcg tccacccaca cctgcacacc ttcggcgtcc
    27721 tgctgcaggc cgagcgtgat caccccgcgc gtgctgccat agcgcagggc attgtccagc
    27781 agattgccaa gcgcttcgcg cagcagttgc ggatcaccct ggatcgacac gccctcgtcg
    27841 ggcccgtcgt aacccaggtc tacgcctgcg gccaatgccc tgtccgcgta acgctccacc
    27901 acaccgcgcg ccaacaccgc cagatccaac gactgcagcg gcaacgcgct gccctgcgga
    27961 tcttcggaac ggctcagcat cagcagctgg ttgaccaggt gctgcagccg cgccagtccg
    28021 cccagcgtgc cggacagcgc cagctgctgc gcctgtggat catgctggcg cagtgaactc
    28081 tccagttcca cctgcatcgc cgccaacggc gtgcgcagct gatgcgcggc attgctgacg
    28141 aagcggcgtt gcgcggcctg catcgcatcc agacgctgca gcagcgcgtt ataggcctcc
    28201 accgccggcc acagttcgcg cggcgcctcc tgtgcaggct ccaacggcgc cagtgggtcc
    28261 gggcgcgggc tggccaagcg gcgtgccacc tggttggcat ggcgggcggc ggcgccggta
    28321 cccgaccacg ccagccacgc ggccagcgcg aggatcgcgg cctggaacgg gatgctggtc
    28381 atcagcagct tgcgctccag ccggtggcgc ttgcgcagcg tttcagccac ccgcaagcgg
    28441 atgtcgtggc cgggtccggc gctgaccacc acttcgacca tgcgcaccgg ttgcccacgc
    28501 aatcgcgcgt cgtagtagac ggcctcgtca tcgcgtgcgg cggcagcggc ggggcggggc
    28561 aacgcttcgg gcaggtcgcc gtacaggcgt ccgcccccgg catcgaccac ttcgccatgc
    28621 acttcatcgg tggtgtccca ggtgaacatg cgcgacaccg ccggcgtgat ctcgatcgag
    28681 gcgcgtccat cctgcacctc caccagttcg gacagcgaca ttgccgagtc aagcagccag
    28741 cggtcgtaga cctggccagc gtagaagcgc gccagtgcga acgaacccac cgcgctgcac
    28801 agcatcagca ccagcagcgg caaccacagg cgccgcagca gcaggccacg caggctgtgc
    28861 acgcgctcag tcaccgccgg cctccagccg gtagccgagg ccgcgcagca tgcggatgcc
    28921 aacgccggca cgcgcctgtt ccagcttacg gcgcaggcgg ctgacatgca cttcgatcac
    28981 cgacaggttg gcctcgtggt cccagctgta cagcgcatcg aacaggcgct gtttggtgac
    29041 ggtgcggccg ggatgctgca tcagtgcttc gaccagcgcc agctctcgcg cggtcagttc
    29101 gatgcgctgg ccatctacct gcgcctcgtt gcggatgctg tcgaagcaca gccggcccag
    29161 ccgcttctgc gccggtgcat cgctgcggcg gcgtgacagc gcacgtagcc gcgcctccag
    29221 ttcgcccagt gcgaaaggct tggccaggta atcatcgcca ccgcggtcca gccccagaat
    29281 gcggtcgtcg acgccatcgc gcgcggtcag gatcaatacc ggcagggtga caccgtcgtt
    29341 gcgcaaccgc gacagcaggt cgaggccatc gacatcgggc agcgacaggt cgagcaccat
    29401 cacgtcatac ggcgcactgg ccagcgcggc cggcgcatgc agcccgcgcg aaaggtggtc
    29461 gcacagatgc ccggcgccct gcagggcgcg gatcagtcca tcggccaggg cggcatcgtc
    29521 ttcgatcagc aggattcgca ttgcaagctt cgtgcaaggt tggggcaagt ttggcgcaag
    29581 tgcgtcacct taccgtgacg cgcatgaatt tctcccttcg acttgcggct gtgctggccg
    29641 ccctcgtgtg cgcgcccgca gcttcggcgc tgtccctggc ggacgcgcag cgcgccatgc
    29701 aggcgcacaa cccggacctg cgtgcggcgg cactggagct gcgcggcgtg cagggcgatg
    29761 cgcagaccgc tgccctgcgg cccgcagccg agttgtcgat cggcagcagc aagatcagcc
    29821 ccaagcatgg catcggcccc ggccgctggc aggacaagcg ggtggacagc acgttgggtg
    29881 tgggctggac ctgggagcgt ggtggcaagc gagcgctgcg catccgccag gcggacgcgt
    29941 tgctgcaggt ggccgggctg gaaatgcttg atacccgacg ccgccagcag gtggcgctgc
    30001 acgaggccta ttttggcctg aagagcgcgc aggagcgggt gcagattgcc gaggacaacc
    30061 gccagagttc gatcgaacag atggccgcag cggacaagca ggtcgcaacc ggggcgatgg
    30121 cgccggtcga tcgtgcgcgg ttggcggtgg acgaccttgc cgtggccgac gccgcgcgcg
    30181 aggcggcgct ggatctgcgc gacgcccggc acgcgctggg gctgctgctc ggcagtgatg
    30241 acagcagcag cctcagtgcc gacgacccgt ggcccgacac ccgcagtgtg gccgccacgc
    30301 gtgcgttcga cccgcagcag cgtgccgatc tgcgtgccgc acagtcgcgc ctcgccgccg
    30361 ccgacgccgg tgtggcgctg gcccgcagcg agcgccaccg cgacatccag ctgggcgttg
    30421 aagccgagcg tgagccgacc gacatcagcg gtgtcacctg gggggtgtcg ttgaccattc
    30481 cgctgggtgg accgtcgcgc gcacgcggtg ccatccagcg cgccgaagca gatcgggaca
    30541 gtgccgcact ggaactgcag gtgctgcagc gcgaagcgcg cgccgagctg gaccagctgc
    30601 aggccagcgc acagtccgcc gcgcagcgtc gcaccgatta cgaagggctg cagtccgatg
    30661 ccgcgcgcaa ggcggtgcag ggcatcgagc tggcctaccg ccgtggtgcc gccagcctga
    30721 ccgacctgct ggatgcgcgc cgcagctggc gcgacttcga ggccgcgctg atcgaggcgc
    30781 gtgtcgacca tgccattgcc ctggcgcgct gggaagccgc cacatccgtt accgaaggag
    30841 agtcccgatg aagtccaccg tcgcccatcg cccgcgcgcg cgccctgcgc tgctgccggc
    30901 gttgctggca ctggccctgc tcagtggctg tggccgcgag ccggcgtcgt atgccgaaga
    30961 tgcgccgcag gtcagtgccg gccagatcca gttcccggcc gacagccgcc agctggacgt
    31021 gctgcgcacc gaggcggtga ccgccggtgc cagtgccagc ctgcagctgc caggccgtgt
    31081 ggtctgggat gagacccgct ccagcgccct gcgcacgccg ctgccggggc aggtcgcgcg
    31141 catcgaggcg cagccgggcc agcaggtaaa ggcgggccag gtcatcgcct ggatcacttc
    31201 gccagagttc ggccaggccc aggccgaggg cgcgcgtggc cgcgccgaac tgcagcaggc
    31261 acgcaaggag ctggaacgca cccgcgagct gcacgccgct ggcgtggcgt ccgggcgtga
    31321 actggacgag gccgaggcca actttgccgg cagccaggcc gatcatgcgc gcgcaaccgc
    31381 cttcgccaag gcctatggca acggccagca cgtcgaccag cgcctgccgc tgcgcgcgcc
    31441 catcgagggc gtactggtgg aacggcggat gagcccgggc atgtcggtca gccccgacag
    31501 cgaacagccg ctggcggtga tcggcgatcc ggatcgcctg tggctgctgc tggacattcc
    31561 cgaaagcctg gccgggcgat tgaaggccgg catgccggtg agcgtgcccg gcgccgatgg
    31621 caaacccctg caggccacgc tgcagcatgt ggatgacttc gtcgacagcg agcgtcgcgt
    31681 ggtacaggcc cgcgccgagc tggacaaccg ctcgcgtgga ttcaaggccg ggcagtatgt
    31741 gcgcgcacag gtggcgctgc cggccgaggg cggcgtctcg ctgcccgatg cggcggtgct
    31801 gttgatcaac ggcacgcagg tggtgttcgt ggaggagggc aagggccgct tcgtgcgcca
    31861 cgccgtgcat gccgaagaac tgggcgatgg ccgcctgtgg gtgcgtgagg gcctggcggc
    31921 aggcagcagg gtggtggtcg aaggtggcct gctgctgcag cagctggtcg acagtgcgcc
    31981 gacggcggcc agcagcggca cggggcacgc cgccccatga tcgatcgcct gattgcctat
    32041 tgcctgcgcc agccgctgat ggtgatgctg gcgctgctgc tgttcatcgg cgcgggcatc
    32101 gccgcgttcc gcgtgctgcc ggtggaagcc ttcccggacg tgtccgacac ccaggtgacg
    32161 gtggtctcgc tgcacccggg ccgcgccgcc gaagaggtgg agcgcgaggt gacgatgcca
    32221 ctggaggtgg cgctgtccgg cattccgcat tcggtgcggg tgttctcgca tacccagttc
    32281 ggcctgtcga tgatcatcct gaccttcgat gacaaggccg atgactattt cgcgcgccag
    32341 caggtgctgg aacgcctgca gggcgtggag ctgccggaag gggtgacgcc ggaactggag
    32401 gcgatgagct cggcggtggg cgagatctac cgctacgtgc tgaaagcccc gcacctgacc
    32461 tcgacccagc tgcgcaccgt gcaggaatgg acgatggagc gcagcctgcg caccgtgccg
    32521 ggcgtggccg atgtgatcag cttcggtggc ttcgcgcgga ccttccaggt caagccggac
    32581 ctggacaagc tgcgcgaccg gggcatcagc ctcggtgagt tcgccgaggc cctggagaag
    32641 ggcagttcga atgccggcgg cggctacgtg gagcgcggcc agcagcagtt cctgatccgc
    32701 ggcgtgggcc tgatgcgttc gccagccgac atcggcaacg tggtggtcgg gcagcgcggc
    32761 ggtacgccga tcctggtacg cgacctggcc agcgttgctg acaccgggct gccgcggcag
    32821 ggcctggtcg ggcaggatga caacgacgat gcggtgttcg gcatggtgct gatgcgcaag
    32881 ggtgagaatc cgtccgacgt gctcgacgcc ttgcatgcgc gcatcgccga gatcgaggcg
    32941 aaccagttgc cggccggggt cagcatcgag ccgttctacg accgctcgtg gctggtttcg
    33001 accacgctga agacggtgtt ccgcaacctg ctggaaggcg ccgtgctggt gttcctggtg
    33061 ctgtggctgt tcctgtacaa cgcccgcgcg gcgctgatcg tggcggcgat gatgccgctg
    33121 gccctgctgt cgaccttcct cggcctgcac ctgtggggcg tgccggccaa cctgctgtcg
    33181 ttgggggcga tggacttcgg catcatcatc gacggtgcgg tgatcgtcac cgagcacatc
    33241 gtctcgcggc tgtcgaagct gccccccacg gcagacagga agacgcgctt ctcgaccatc
    33301 ctttcagcgg catcggaagt gggccggccg acgttcttct cgatgatgat catcatcgcc
    33361 gcgcatatcc cgatcttcac cctgcagcgc caggaaggcc gcatgttcgc gccgatggcc
    33421 tattcggtga cctcggcgtt gatcggtgcg ttgatcctgg cgctgaccgt ggtgccgctg
    33481 ttctgctact ggtggctacg gcgcgaccgc atgcgcgacg gcaatccgct gatggaccgc
    33541 ctgaccgggt ggtacaagcc ggtgctggag cgtgcgctgg cccgcccgcg cgcggtggtg
    33601 ctgaccgcgg cggcgttgct ggtcggcaca ctggcgctgg gcacccggct gggctcggag
    33661 ttcctgcccg aattggacga gggttcgatc tggctgaccg ccaccctcga ccccagcacc
    33721 agcctggccg aggcgcagca gcagtcgcgg cgcatccgcg aactggtcgg cacgttcccg
    33781 caggtatcga cggtggtggc caagctgggg cgcccggaag atggttccga cgccaagggt
    33841 gccaaccaga tcgaggcgtt ggtggcattg aagccggaga aggaatggcc gaagggcgtg
    33901 gacaagcggc agctggtgag cgacctgcag cgcacactgg agcagcgcat acccgggccg
    33961 gagttctcga tctcgcagcc ggtgcgcgac aacatcctgg agagcatttc gcagatcaag
    34021 gggcaggtgg tgatcaaggt cagcggttcg gacctggacg tgttgaaccg gcaggcccag
    34081 gcgatcctcg gccaggtgcg cagcgtggac ggcgtggaga gcgccttcat cgaccgcgac
    34141 ggcgcgttgc cgcagctgca gatcgagatc gatcgtgacc gggccgcgcg ttatggcctg
    34201 aatgtgcgcg acatcgacga agtgatcgag accgcactgg gtgggcgcca ggtcggcgag
    34261 ctgtgggagg gcgaccgcag gttcccgatc acgctgcggc tggacgacgc cgaccgcgac
    34321 ctgcaacggc tgcgcacggt gccggtgggc atcggtgacg gccacgcggt gacgctgtcc
    34381 gatgtggccg agttccgcat ggccagcggc gcgatcaaca tctcgcgcga gaacgcgcag
    34441 cgggtgaagg cggtcagcat cttcatcgcc gggcgcgaca tgggcagcgt ggtggccgac
    34501 atgcgcaagc gcgtggatgc cagcgtgcag ctgccggagg gctaccggct ggagtggtcc
    34561 ggtgagttcg agaaccagca gcgcgcgatg aagcggctgg gctgggtgat tccgctgtcg
    34621 gtgctgctga tcttcgtgct gctgttcgat gccttcaagg acatcagcag tgcggcgctg
    34681 atcctggcca acgtgccact ggcgatgatc ggcggcatcc tggcgctgtg gctgaccggc
    34741 attccgttgt cggtgtcggc ggcgatcggc ttcattgcat tgttcgggca agccgtgttg
    34801 aacggggtgg tgatgctcag tcgcttcgcc cagctgcgcg aacagggcat ggacctgctg
    34861 cagtcggtgg tgcagggttc gctgcagcgc ctgcgcacgg tgctgatgac cgcgctgctg
    34921 gcgatgttcg gcctgctgcc gatggcgacc tcgcacgcga tcggtgccga gacccagaag
    34981 ccgctggcgg tggtggtgat cggcggcctg ctgtcggcga tgctgctgac cctgctggtg
    35041 ctgcccacgc tgtactactg ggtacaccgc cgccgcgagg cgcggtagat gccaaccttg
    35101 gtcggcacgc gcggaacgcc caccaaggtg ggcgactacc ggggtggatg ccaaccttgg
    35161 ttggcatgtt gccaatcgcc caccaaggtg ggcgactacc ggtgtgccgt gccctggtag
    35221 atgccaacct tggctggcat gcgccaaggc ggccacccag cgggcgacga acagcgtgcc
    35281 gtgctctggt agatgccaac cttggttggc atgcgccaag gcggccaccc agcgggcgac
    35341 gaacagcgtg ccgtgatctg gtagatgcca accttggttg gcatgcagca ccggcccacg
    35401 gcggacaatc gtgcataatc agccgacacc atccggatag ccgaacaatg gaccgcttta
    35461 cggccatgcg cgccttcgtc cgtatcgtcg agcgccgcag tttcacccgc gcctccgagg
    35521 atcttggcct gccacgggcc acggtgaccg acgcgatcaa ggcgctggaa cagcgcttgg
    35581 gggtgcgcct gttgaaccgg accacgcggc tggtggtacc gaccctggag ggtgaagcct
    35641 tctacggtcg ttgcctgcgc ctgatcgccg acatggacga cgccgaggcg gcgttccgtg
    35701 acgtgccacc gcgcggcctg ctgcgcatcg aggtgcatgg cacgctgggc cggcatctgc
    35761 tgtttccgca cctgccggat ttcctgcagc gctaccccga catcgagctg gacgtcagcg
    35821 agggagaccg ctatgtcgac ctgctgcgcg aaggcgtgga tgcggccgtg cgggtcggca
    35881 cgctggccga cagcgacctg gcggcgcgac ggctgacgct gctgcgcgag gtcaccgtgg
    35941 cctcgccggg ctatgtgcag gcccggggct tgcccgaggg aatcgactcc ctgaaggacg
    36001 gccacgaaat gatcggctat cgttccagcg ccaccggcca gctgattcct ttggagttcc
    36061 agcaggacgg acaggtgcgc tacgtgccgt tgccggcacg ggtgctggtg tccggtgcgg
    36121 atgcgttcct cggcgctgcg ctggcggggc tgggcatcat ccaggcaccg cgttaccgca
    36181 tggatccgta cattgcgcgg ggcgagctgg tcgaactgct gccgcagatg ccgccaacgc
    36241 cgagcccgct gaacctggtc tacccgcgca accgcacgcc ctcgccgcgg ttgcgggtgt
    36301 tcatcgactg ggtggcggcg ctgttcgatc gggcggggta gtgccggccg ctgcgctcgg
    36361 cagcagcagt tcgaacacgg tgccggtttc atccgaggcg acgccgacgc tgccgccatg
    36421 ggcctgggcg atggcgcggg tgatcgccag gcccagcccg gcgccttcat ggcggctgcg
    36481 ctcgccacga tagaagcggt cgaacaggcg cggcagcgct tcggtggcaa tcggcgtgcc
    36541 gaggttgtgc acgctgatcc tgcaccggcc ggccccctgt tccagccgca cccgcacctc
    36601 gcttcccgcg cgggcgtgct tcaacgcatt ggacagcagg ttggcaatcg cacggtgcag
    36661 catcaacgga ttgccattga cgcgcgcgat accgtcgcgg cgcagcgtca actgccggtc
    36721 ctcggccagc agcccgtaga actccagcag cgagtccacc accgcatcca gcgccaccgg
    36781 ctcgcgcgaa ggcagtacac cgggtgtctc ggtctgcgcc aggtacagca ggtcacccac
    36841 ggtctgcgcc agctgctgaa gctcttccgc acaggaggcc agcgtctccc gataggcctc
    36901 gttgctgcgt ggatgggcca gtacgacctg cacctgggtc agcatgttgg tgatcggcgt
    36961 acgcagttcg tgggcaaggt cgccggagaa ctcggtgagg cgtgcgaaat cctgctgcag
    37021 ccgcgccagc atgccgttga gggtctgcgc cagctgctcc agttcggccg gtgcccggcg
    37081 tgcactcaag cgccgctgca ggcgcccggc ggtgatctcg cgggcttcat cggccagcgt
    37141 gcgcaggggg cgcagcgtgc gccgcaccac gtaaccaccg agcaggctgc tggccagcgc
    37201 ggccgcgatg atggcaatgg ccagcagatg gcggaagcgc tgcaggaacg cggcatggcg
    37261 ggcatcgtcg atggccagca gggtgaccag ctggctgccg tcggccaggg tctggcgcag
    37321 gtgcagggca tgcatgcagc ggccgtcggc aagcgtccag tcatgccggc gcggtaccgt
    37381 atcgacgggt tggctgcggg catgttcgcg cagcagcggc ggtgcggtgg agaacagcac
    37441 gcggccgcga tcatcggcga tatggaaggc gatgtcggga tgatggccga gcgcggcggc
    37501 cagccgttgc gcgcgtgccg atgccggccc gcgggaggcc aggtcgttga tcagcgcgac
    37561 cttgttctcc agctcggtga aatcctgcgc cactagatcg tgacgggcgc tgacatatat
    37621 cgcgacgccc agcgccgcca gcaccagtgt ggccacggtg gcgaacagca ccgtcaaccg
    37681 caccgccatg gaacggcgca ggctcatccg tcgcgcgcag caccgtcctc cggcgcctcc
    37741 agcacatagc ccatgccacg cacggtcacg atcagcttgg cgtcgaacgc gtcgtcgatc
    37801 ttcgcgcgca ggcggcggat ggccacatcg atcacattgg tgtcgctgtc gaagttcatg
    37861 tcccacacct gcgaggcgat cagcgagcgg ggcagcactt caccctggcg gcgcgccagc
    37921 agctccagca gggtgtattc cttctggctg agcgcgatgc gctggccggc ccgctccacc
    37981 cggcgccgca gcgtatcgac caccagatcg gcgatgacga tgcgctcggc ctgcggcaac
    38041 gcctggcctc ggcgcagcag ggtgcgcacg cgcgcgagca gctcggcgaa ggcaaagggc
    38101 ttggccaggt agtcgtcggc gcccagctcc agtccgtgca cccggtcggc gatgctgctg
    38161 cgtgcggtaa ggaacagcac cggcagcggc cagccgtccg cgcgcagccg cgacagcacg
    38221 ttccagccgt ccagcccggg cagcatcacg tcgaggatga ccagctggta ttcgcccgtg
    38281 ccggccagat gcagcccatc gacgccgttg caggcaagat cgaccacgta gccggcttcg
    38341 atcagaccct ggcgcaggta attgccggtc ttgggttcgt cttcgacgat cagcagtttc
    38401 atggtgcgcc catcatcgca gcttgcacct gcatcggccc ggaccgctca tgccagtgga
    38461 tccagtgtgc ccagcacggc cacgcaggcc agcaccagca gcaccagcac cgactcgcag
    38521 gccaggctgt ggcgcagggc gcgcaatggg cgcggctgcc agccgccgcg gatggacacc
    38581 gccagcgcgg gtaccaagcg ccagcgatgc aatgcggcca gtgccagcat gccgcccacc
    38641 agcgccagct tgagcagcag ccagcgccca tgcgcggtgc tggccagggt ctgcaccgat
    38701 cccccaagat cgacataggt ataggtgccg gtcattgcca gtgtcgcgac aatgagcgtg
    38761 ccgggcaggg cgaagccgtg cgccgcccgc cacagtgcat gggtacgctc gcgcaggccc
    38821 acgccctgcg ggcgcagcgc cagttgcagc agggcggcga tcgcgcccac ccaggcgccc
    38881 gcggccagca gatgcgcgat gccggcgatc agccgcagcg tgccgccggg gccgtcaccg
    38941 gcggcggcat ggccgttcca ggccaggctg gccaacgcga ccgccgacag cagcatcagc
    39001 gcagcacgcc ataggccgtg ctgcgggcgg ttgatcgcca gcagcggcag catcgccagc
    39061 agggccacac cccgcagcag gcctgcctgg cccaccggcg ttccgctgag gaaccagtgt
    39121 gcggtcgcac cgtcgatgtc ggtcggcgcg atgccgagca cgccggacaa acgggccagg
    39181 gcgtcgacgg ccaccagcag cagcgcgatg aaggtcattg ccagcagggc gccgcgcggc
    39241 agcagcggac gcacgaacag cgtgcgcccg aacagcagca tcagtgccac atacagcgcc
    39301 agcctcagcc catacggcga gagctcgacc acaagcgcgg ccttacttca cggtaaagcg
    39361 gtaggtgccg gtgaccggat ggctgtcctg gccgactgcg cgccattgca gtgcgtaacg
    39421 gcctgcgggc agcggcttgc cgaaccgcgc gcgcagggtg tggccgtctt cggagacctc
    39481 ctgcgcggtg gtcggcatgg ccatcttcat gcggccgtgg tccatgctca gctcgatgcg
    39541 ggtggcacgc ggcatcacct tctcactgaa ctgcagctcg atctggctgg ccggggccac
    39601 ggtggcatcg gcggccggcg tggcccgcac caggctggga tgggccagcg ccagtggcgc
    39661 gatggcgagg ccggccagca tcagcatgag cagggcggga cgctgcaggg aacggatcat
    39721 tgcggagcac ctgtggggaa tgtggccctc agggtggagg ccggcacctt tcgatggcct
    39781 gacctggaca ttaccggtct gtaaggttgg ccggtgctgc acagcggcga tccggatcac
    39841 ccgctgcgcg cctgcccgat ccaggccgag ggcgaacagc caagcacacg gcggaaggcc
    39901 gcgctgaact tgctggggtt ggcgtatccg ctggccaggg ccacgtcggt gacggtgcgg
    39961 ccctgcgcca gcgcggcgcc ggcccgctgc atgcggtgcc gggtcaggaa tgcatacggt
    40021 ggcagcccgg tggcggcgcg cagagcgcgg ccgaagctgg acggctgcat ctgcactgcg
    40081 gcagccagct cggtgacggt cagcggctgg ccctgccgtg catcgatgta gtccttcagc
    40141 tgcagcagcc gttgtgccga caggggtgtg gcggtgccgc ccacctcgcg ccgttggccg
    40201 gcaagctggc ccaggcgatg cagcagcacc tgcgcgccgt gttcgagaaa accgggcagg
    40261 cacgcaccgg cctgcgcgct gcaccacagc gcctgtagca ccgaggccac caccgggtcg
    40321 tggtgaagcc gcgccgccag cggttgcagg tgctgcagcg tgggcgcgtc atgtgggtac
    40381 gcgtgggtgt cgatggcaat gccgagcacg tcgacggcgg ggctggcgta ggtgccgctg
    40441 tcgccaggca ggaccaggtt gaaccggccc ggtcgccacg gggcctgcag cacgccggtg
    40501 agcgtgcgct gctgcaacca ccctccgccg gccatggcca tgcccaggcg cagttgccgc
    40561 ggatggccca tctcgccttc gctggcctcg aagcggtggc gcagcaggac caccgccccg
    40621 tccgggctga cgtgggcggc cgcaggctgg gggccggttt cgcgcagcag ctggtcggcg
    40681 agggcgggca tcacggatcc ggaaatggag cggcgctgcc gcgaatggag tggcgggatg
    40741 gcgcgaatgt tacaggataa cactcgtgac ccgcgctgcc gccgcccgcg cgtccgcctt
    40801 tccatccgtt gaggtctgtc cgttgaagtc gtccacgcct gctgccgccc ttgttgcggc
    40861 atccctgctc attcctgcca tgcccgcgct tgcccagcag gccgacccgg ccacgcttga
    40921 cggtgtccgt gtcaccggct ccaagcgcga taccccgtac ctgaagagcg acctgtcggt
    40981 caccgtgctt gatcggcagg cgctgaaaga ggccggtgtc accgagttcc gtgacctcga
    41041 caagctcgcc ccgaacgtga agttcaatgc gatgggccag ctgagcaaca tgttcatctc
    41101 gatccgcggc atcgagtcca atccgttcct ggtcaaccgt gcgtcggtct atatcgatgg
    41161 cattccgttc cgtgaactga gcaatgccgt gctcaaccag gtcgagtcgg tggaggtgct
    41221 gcgcgggccg cagggcacgc tgtatggcgc caacagcgag tccggcctgg tgctggtgcg
    41281 cacgcgcggt ccggccgatg cgcgcgaagg cgaactcaat gtgcgcagta cctggttcgg
    41341 caatggcaac ggcacggcac tggatggctt cctggccggc ccgttgagcc gcgatggccg
    41401 cctgtccggc tcggtggcgt tcatgggctc ggacgaggat gcctacctga agaacctcac
    41461 gccctccggg gcgcgcggca gggtgggcga gggctacctg cagggcaagc tgcgctggcg
    41521 gccgagcgac tacgtttcgg tgaatgcact ggcctaccat ctgcgcaccc gtgcgccggg
    41581 catgttcgag tacgagtacc tgccgctgga taccggcctg tacaaccgca cctacggcac
    41641 ctcgctcaac ggcgaccgtc gcgccggtga tttcacctac atcaatgacg cgcccaagcg
    41701 caccgcgaaa gatgagtcgg tggcgggcct gagtgcgcaa tggcagctgc aggccggcac
    41761 gctggacgtg gccgcctcct ggcggaacga ggaagtgacc tcggccggct acgacttcga
    41821 catgacccag agcgcggcac tggcaggccg catctacgac cggaagaacg aatggacggc
    41881 cgaggcgcgc ttcagttcgc ccagtgacca ggcgttgacc tggatggccg gtgtgtcgac
    41941 ctaccgcaac agcaaggatt cgatcctggg tacgttcgtc ggtcctgcgc tgcgtgggct
    42001 ggacagctac aacctggcgc cgcggcagac ctcgaagggg gaggactaca gtgtgttcgc
    42061 caccgccagc tataccttcc cgtcgcttcc acagctgacc gcaagtgtgg gcctgcgcca
    42121 tgagcaggcg cggcgttcca ccgagcagcg tgccggcgcg ctggacctcg gcgccggcgg
    42181 ccgcgtgctg taccgcgatg ccgcgctggc gcataccttc tcggccacgc tgccgcgggt
    42241 gtcgctgcgc tacgacgcca ccgacgacct gtcgttctat gcggcctcgg ccaagggcta
    42301 cattccgggc ggcttcaacc tggccgcagc gcagagcgat gtggtcaacg acaaggtgct
    42361 gtgctatgag tccgagcgca tgtggagcca tgagctgggc ttcaagatga acctggccgg
    42421 cggccgtggc cacatcggcg gtgcgctgtt ccacatcacc tcggacaact ggcaggagat
    42481 ccaggtggcc accgatgcca acggccgccc gatctcgtcg gactacgtgg gctcggatgc
    42541 gtcgatccgt tcgcgcggcg cggaacttga aggcgtgttc gaggtgatgc ccggcttcac
    42601 cctgatggcc aatgtgggct atgtcgatgc caagtacacc aggctgtggg tcagcgtcga
    42661 ccagaacctg gacggcaagc gggtcaagct gaccccgcat tacaccggct atctggcggc
    42721 gcgctaccag ttcgagtctg gcctttacgc gcggctggag tcgcagttca ccggttccag
    42781 tgcgctggac gagcgcaacc gcgcgttcca gccggccgtc gcggtgctgg gcgtgcagct
    42841 gggctatgag cgcgggccgt ggagcacacg cgtgttcgtg cagaacctca ccaacaagcg
    42901 ccgcatcaac ggcctgatct tcgacaacct ggcgttcggc cgcgacggta attactacgg
    42961 tccggtcgac agcccgcgca tcgtcggcgc ggaagtgggc tatcgcttct
//
LOCUS       DAOKIP010000014        42242 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.014,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000014 DAOKIP010000000
VERSION     DAOKIP010000014.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 42242)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 42242)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..42242
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.014"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(8..886)
                     /locus_tag="QEL58_000690"
     CDS             complement(8..886)
                     /locus_tag="QEL58_000690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005915330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="plasmid replication/partition related protein"
                     /protein_id="HDS1675204.1"
                     /translation="MDIVVKEELKAYIDPLTADEHDALERSILAEGCRDALVLWGDVL
                     VDGHNRFGICQKHGLPFNTVQNTRFQSMEDVHLWMIEQHLGRRSVSDFQRGVLALRKR
                     DILAARKQVEQAQLQRESDGSAEIVEDAGEDSPPWEPAPKISRAELAREAKLSTSQVG
                     MIERIHAQAAAEVVEAVKAGVISISAAAAVADLPEDEQRAAAAGGKDELKQAAKRVRE
                     SKRKPRAPKPDAAEMDFEEPDEDAIASRDADVLSALEQLGEDAPALRRRVVALTREND
                     TLRAQLAALRKQLEAL"
     gene            complement(950..2302)
                     /locus_tag="QEL58_000691"
     CDS             complement(950..2302)
                     /locus_tag="QEL58_000691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate aminotransferase family protein"
                     /protein_id="HDS1675205.1"
                     /translation="MKRPESDLHDLATQRPESLDAYWMPFTANRQYKAAPRVLVRAEG
                     MHYEDVDGRPILDGTAGLWCCNAGHARPRIVEAIVEQARTLDYSPAFQMGSPPAFALA
                     QRLAALAPAALNHVFFTSSGSEAVDTAMKIALAYHRQRGEGQRTRFISREKAYHGVGF
                     GGMALGGLPNNRRAFGLQLGGVDYLRHTLDLQRNAFSKGLPRQGAELADDLERLIALH
                     DASTIAAVFVEPIAGSAGVILPAPGYLQRLRELCDHHGILLVFDEVITGFGRVGMPFA
                     AQRFGVTPDLLTFAKAVSNGAVPLGGVLASDAVHAALMQAPPQAIELFHGYTYSGHPL
                     ACAAALATLEVYAEERLFERAIELGEYWQERLHALQGLPNVIDIRNFGLVGAVELAPR
                     RDTPGSRGYEVFRRCFHDGRLLVRCTGDIIALSPPLIVDKPQIDQITGILGEMIRATA
                     "
     gene            2407..3903
                     /locus_tag="QEL58_000692"
     CDS             2407..3903
                     /locus_tag="QEL58_000692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019337130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase"
                     /protein_id="HDS1675206.1"
                     /translation="MADFPDRSHWQALALQLSIPGQAFIDGRQVDAASGARFDCISPI
                     DGRVLGAVADCDTQDVERAVLAARRSFDAGHWSQASPAHRKRVLLALAALVEKHADEL
                     ALLEALDMGKPVRDARRIDLPGVVRCLSWTAEAVDKLYGEIAPTGPHELGLVTREAAG
                     VVAAIVPWNFPLLMACWKIAPALAMGNSVVLKPSERSPLSALRLAALAAEAGLPDGVL
                     NVLPGHGARVGEPLALHMDVDVLAFTGSTATGAKLLEYSGRSNLKRVWLECGGKSPHV
                     VFADAPDLDAAAKGVAQGIFFNQGEVCTAGSRLLVQRSIREDFVHQVVAYGQHMQPRH
                     PLEADAPMGALVDAAHLDKVMGDIARAEGEGARLLLGGHRAEVEAGGCYVQPTVFDQV
                     RPEQALAREEVFGPVLAVLGFDDEAEAVRLANDSRYGLAAGLWTRDLGRAHRVARQLR
                     AGSVWVNGWDGGDMTAPFGGYKQSGNGRDKSLHAFDKYSEIKATWIQL"
     gene            complement(4059..4700)
                     /locus_tag="QEL58_000693"
     CDS             complement(4059..4700)
                     /locus_tag="QEL58_000693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010486180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675207.1"
                     /translation="MAAVALSWSDSPKLPRMAAWLVVLLVHGLMALWLWGSGRIVLRA
                     DDGARISLRWLPPELPAPAPSLPALPSVPMTRRAASVKPHPAPIAQAETALPAEGAPA
                     AEAPLILGLPAGSIEGGDGISAAGVAPRLIGRREVHAAFAPRRNHFRIRRQMTPEQIV
                     HGVAQLLGLWPPGYIVDPCELGKQDMDYFQNAVEEADRDLLRAAVLQVSARCR"
     gene            4848..6149
                     /locus_tag="QEL58_000694"
     CDS             4848..6149
                     /locus_tag="QEL58_000694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004151682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MHS family MFS transporter"
                     /protein_id="HDS1675208.1"
                     /translation="MSTTRAAAPPVNSPRRVLLASLIGTTIEFFDFYIYATAAVLVFP
                     HLFFPDSSEQAALLQSLATFAVAFIARPVGSAVFGHFGDRIGRKATLVAALLTMGLST
                     VLIGLLPTHAQIGLWAPALLALCRFGQGLGLGGEWGGAVLLATENAPPGKRAWYGMFP
                     QLGAPLGFLLSAGIFLVLGRCLSQDDFLQWGWRIPFVASALLVGLGLWVRLNIHETPD
                     FKKALERKAPVRLPMLTVLRDHPVPMLLGTLGAFATFVLFYLMTVFSLGHGTAVLGYS
                     REQFLLMQMAGMLFFALGIPLSARYGDRWGTRRTMIVASVLIVGFGVLFAPLFQPHSP
                     WLVTGFLCLGLFLMGLTYGPCGTFLAEIYPVEVRYTGASLSFNLAGILGAAPAPYLAT
                     WLAEHFGLVAVGYYLCLTAVATLCALVALHRRALRLNQRSA"
     gene            complement(6130..6591)
                     /locus_tag="QEL58_000695"
     CDS             complement(6130..6591)
                     /locus_tag="QEL58_000695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005415916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacteriohemerythrin"
                     /protein_id="HDS1675209.1"
                     /translation="MALLVWQDDLNIGIDVIDQQHRRIIEMLNHLHVAQASMQRAAVG
                     EVIDEVVDYTMSHFAFEEELMEEAGYPFCAAHKRVHEVFIKRVAEYRLRFQAGEDISD
                     ELRTMLSRWLFNHIRGDDQAYAEQVKAHLNQFAREHQGGGWLGRTLKRFFG"
     gene            complement(6677..8020)
                     /locus_tag="QEL58_000696"
     CDS             complement(6677..8020)
                     /locus_tag="QEL58_000696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HDS1675210.1"
                     /translation="MPVLPQAAVDGDLADPLPQRILLVENSRAFTGMLREAIEQRLEL
                     PVVIASTLAEADRLLSEDGGWFLVLTGLVLADGDRDAVVEFFLKRGLPTVVVSSVYDE
                     DLRKRVLQQQIIDYVLKNTPGSIDYLVWLVQRLERNRRIAALVVDDSPSARGYAAALL
                     RMYGHEVHEAADGNEGLAAIEAHPAIRLAVVDQEMPGMQGVEFTRRLRTLRSRDKVAV
                     IGISGNTDASLIPRFLKNGANDFLRKPFSREEFFCRVSQNVDQLELIGTLQDLATRDF
                     LTGLPNRRCFLEQSQRQLPQLQLHGQCVAVAMIDIDHFKHINDTYGHEAGDDALRAVA
                     GAVAAHARSQDLIARFGGEEFCLLVPDMEQDEALLYFEELRQRIAALEVDIGSATLRM
                     TVSIGLCCLRPQRDALHRLISEADRQLYLAKAGGRNRVSCTTMASPLRPREPALP"
     gene            8343..8801
                     /locus_tag="QEL58_000697"
     CDS             8343..8801
                     /locus_tag="QEL58_000697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010486176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675211.1"
                     /translation="MGVSVRFSELRVLLPAAVLLSVSAFSASACCPSGDNGIHMARSG
                     LGESLPAATNLSLNPNWLVYGFERDGISYYQVNDLSGQVVLIVGNVDATFWTLPAGKS
                     AAKVSLPSHRLSLPEKVVRRVVFQSAQFSLVVYGEGASAVWVVESMDTAG"
     gene            complement(8914..10533)
                     /locus_tag="QEL58_000698"
     CDS             complement(8914..10533)
                     /locus_tag="QEL58_000698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014036573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MASE1 domain-containing protein"
                     /protein_id="HDS1675212.1"
                     /translation="MGPPPCHEHWRLGLNWWKRGIELTFRVRPLGLAIAVMYAITCWA
                     AWRVSLDQFYLPAGIRVAALLVCPPRLWPYLLIGEYAYFAQLRYPLIDEYGLAWVILG
                     SAFLLPAVALVVYAHRKFMTARADGWLLSVAVSAAVIATALKLGLSHLLSENPSSVPI
                     ATRAVRFVLGDYIAILTVAPLAVLWSRRHAMDEWGRWRSPPTVAALAVMLGLGLITAM
                     APGLSDASKTSLQLTMALPVIVLTCIHGWQGAAVGVPLLNILIAVVTPTSGLLGSYDE
                     RTFTTQQLIAIAGTGLLALGSRISRHYHQRGRRDVDGHQAARLSRSAHMAGEMDLRER
                     ALDLRRIADDIEASLSRTADLLKTHGHHSPAVDLLLTSTAHSRQFRELTSMVYPTEVE
                     HVGLYLALQVSGIRESWNQTHRITSPFLTGDPCKLSIPLQLAAYRTLTEAVSLLLKQE
                     QGQIQIRARCGKLKGQQGILLRIALLDRDRDLLLDTTRLAIERLSSRAQAYGGKVHCE
                     GNCVRVLLLETAASGAQSSMQAAWASRADIA"
     gene            complement(10684..12288)
                     /locus_tag="QEL58_000699"
     CDS             complement(10684..12288)
                     /locus_tag="QEL58_000699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005408815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MASE1 domain-containing protein"
                     /protein_id="HDS1675213.1"
                     /translation="MRWWKDGLQVRIRVSPEGLALALLYAFACWGARKLSLDQFFLPA
                     GVRVAALLLCPPRLWPYLLIGEYAYFAHLRIPLISKYNLTWVILASVFLMPAVMLIVR
                     LHRKLLARTTIVGVISIAACAAMVISLLNLGISYLLWEPLHNASFITNLLRYALGDFT
                     GILILAPLALLWIRRAEEEWTVRSIAAVAGALAAMLVVGLQATPVSASITAPGSLQLL
                     LILPIPAIALTCLLGWRGAAIGVAAVNMMLGLSAPADHPTAFDPATFATQQAMAIASI
                     ALLLLGARITHFQSQHRLREEDGRAALLLARNSHLASEMDLRERAAHLRQLGDGMDLS
                     LNEMVNWLHAQGHHAVADSLRHTSEVHSRLFRAQASMIYPAALERLGLYVALQAGGVR
                     EAWNATHRIGQPRLMGDPCALGVGLQLAAYRLVVDAVSLLLRCESGQISVSIRCGCFA
                     RNPGVFICVALVGRNESLGIRTTELANEQLLGRILVHGGHMDMSGNRLRIVLTEARGG
                     SSQASATEALGGRTSSIDPGAPRAAT"
     gene            complement(12340..13617)
                     /locus_tag="QEL58_000700"
     CDS             complement(12340..13617)
                     /locus_tag="QEL58_000700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014646562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HDS1675214.1"
                     /translation="MSAAFPPSWYAASLPEPPALPALRGDVQADVAVLGAGYTGLTAA
                     LELAARGQRVVLLEAQRIGWGASGRNGGQALVGYGCEVDELERQLGRDDARRLFDWSR
                     DAVQAMRTRIDRHGIDCHWVEGHASVAIRERHERDLRANCEHLQRHYDYPMQWWDRDT
                     LHAQLDSPRYRAAMFDPLSAHLQPLAYARGLADAARAAGVVIHEDSPVVRIQRGSQPA
                     LHTAQGSVRAAHLVVAGNAWLQGLLPELERRIMPVGTYIGASAPLGAQRARALIGNNM
                     AVADTAWALDYFRLSHDHRLLFGGRASYSALPPPGLHGVMQRRMHQVFPQLADVPLEQ
                     VWGGYVDITRNRAPHWGRLDGNLYFAQGFSGHGVAAAGLAGEVIAAAIAGQSERLDVF
                     QRLRHAPFPGGRLLRMPLLVAAMSWYKLRDALW"
     gene            13779..14540
                     /locus_tag="QEL58_000701"
     CDS             13779..14540
                     /locus_tag="QEL58_000701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014646563.1"
                     /note="Members of this family of hydrolases with an active
                     site Cys residue belong to MEROPS family C26; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyl-gamma-aminobutyrate hydrolase
                     family protein"
                     /protein_id="HDS1675215.1"
                     /translation="MRRLPWVGLPTDSTVLGHHRFAVAGEKYVRALVEAADVTPLVLP
                     SLQPPLPACDWLQGLDGLLLTGAVSNIEPQHYEGGRSWPGNPHDPARDANAFALLQEA
                     LALDLPVLAICRGFQELNVALGGSLHPQMHVVPGLDDHREDPQAPVEVQYGPAHAVTL
                     AADGWLAQWHEGERVQVNSVHGQGIARLAQGLQVEAVADDGLVEAARSLHHRFVLGVQ
                     WHPEWRVMQAPFYHAIFRAFGQACRQHQQNRLDSR"
     gene            14537..15931
                     /locus_tag="QEL58_000702"
     CDS             14537..15931
                     /locus_tag="QEL58_000702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014508026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine synthetase"
                     /protein_id="HDS1675216.1"
                     /translation="MSSRTRPRKTATPPAPQESSLLRWLKERRITEVECLVPDITGNA
                     RGKIIPADKFSHDYGTRLPEGIFATTVTGEFPDDYYDLTSPSDSDMILRPDPDTVRMV
                     PWATDPTAQIIHDCYTKTGEPHELAPRNVLRRVLDAYAELGLRPVVAPELEFFLVQKN
                     TDPDFPLLPPAGRSGRPETARQSYSIDAVNEFDPILDLMYDYCDAMKLDVDTLIHESG
                     AAQLEVNFTHANAMDLADQVFLFKRTMRESAMRHGVYATFLAKPMENEPGSAMHIHQS
                     LVRISDGQNVFSGEHGGEDFSPMFAHYLAGLQKYVPMAMAFFAPNVNSYRRLVFGEVS
                     PSNVHWGFDNRTCGLRVPLDTPENMRVESRFAGSDANPYLAMAATLACGLLGIRERLA
                     PDAPVSGSAKELGYNLPRSLGEALDGLEQCGALQALLGERFCRAYISVKRKEYETFFR
                     VISSWEREFLLLNV"
     gene            16024..17133
                     /locus_tag="QEL58_000703"
     CDS             16024..17133
                     /locus_tag="QEL58_000703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004151739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine ABC transporter substrate-binding
                     protein"
                     /protein_id="HDS1675217.1"
                     /translation="MKLRILTLGLASAMLAACGGGKGGAQDSQVLNVYNYSDYIAEDT
                     IPNFEKESGIKVTYDVFDSDEMVETKLLAGNSGYDVVVPTLNFFGRQIQAGVFLPLDK
                     SKIPNLANLDPAVMKRIATQDPGNQYGVPYMIGTTGIGYNVDMLKQRFGGSADIANSW
                     DLVFKPENISKMKDCGVTILDTPADMIPIALHYLGLDPHSADPAELQKAADLLKSIRP
                     YVQNFHSSQYVGSLANGGTCLVVGWSGDIIQARDRAEEASNGVHVAYSIPKEGAPQWF
                     DMLAIPKDAKHPEAAYAFINYLLQPKVAAANTNFIHYANPVPTATPLVDEAIRTDPTI
                     YPPADVAEKMFTYSINTPETDKLYTRLWTEVKTGR"
     gene            17322..18458
                     /gene="potA"
                     /locus_tag="QEL58_000704"
     CDS             17322..18458
                     /gene="potA"
                     /locus_tag="QEL58_000704"
                     /EC_number="7.6.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014646566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine ABC transporter ATP-binding protein"
                     /protein_id="HDS1675218.1"
                     /translation="MPVEAQPVAAVVDTTGVPGYLSIRDLRKEFDGFVAVDDVNLDVR
                     KGEIFALLGGSGSGKSTLLRCLGGFETPTKGSITLDGQRLDALPPYQRPVNMMFQSYA
                     LFPHMTVEQNIAFGLKQDGLAKDAISKRVGEMLELVQMGHLGKRKPHQLSGGQQQRVA
                     LARSLAKGPKLLLLDEPMGALDKKLRSQMQLELVSIIESSGVTCVMVTHDQEEAMTMA
                     TRIAVMDAGWIQQVGKPDEVYEQPANRFVAEFIGSVNLFDGVIDEDLPEYVTVRSPLF
                     PAPIYIAHGITGYEGQPVAFALRPEKVMIGKDEPEGHTNKAQGVIEDIAYFGSHSVYH
                     VRLPSGAKVLANFANSQRWASDGLTWGDSVWVHWRDNDGVVLTS"
     gene            18455..19387
                     /locus_tag="QEL58_000705"
     CDS             18455..19387
                     /locus_tag="QEL58_000705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HDS1675219.1"
                     /translation="MNVAGLKRWLPGLRATVIGIPYLWLLLFFAVPFLIVLMISFSLS
                     RVGSPPYTWLLQYVDGGFSLKLNLENYLALFRDSIYAQAFLSSIKIAAISTFLTLLIG
                     YPMAYAIARLSPAARNVAMMLVVLPSWTSFLIRVYAWKAILDRNGLLDQFLQFTGLQT
                     LMTSLGLPKLQLIDTPTAAYIGIVYCYLPFMVLPLYANLVKHDHRLLEAAYDLGAKPW
                     QAFLRITLPLSKAGIIAGCMLVMIPAIGEFVIPEMLGGSETLMVGRQLWNEFFNNRNW
                     PGASAMAVAMILLLLVPILLFNRSQQRLLEGKQA"
     gene            19384..20226
                     /locus_tag="QEL58_000706"
     CDS             19384..20226
                     /locus_tag="QEL58_000706"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HDS1675220.1"
                     /translation="MSPRTAKGLGLGVLLLGFAFLYLPILLLMFYSFNSSRLAMVWAG
                     FSTRAYSDLFADRALMDAMWTSLVVAFWTACTATVLGTLAAMVMTRFKRFRGKPLFGA
                     LVTAPLVMPDVILGFSLMALLASMGAIPGFPARGLTTIWIAHVTFTLCFVTVVVSSRL
                     QEMDLSLEEAAMDLGASRLTVFGRITLPIIAPALVAGWLLAFTLSLDDVVVASFVATP
                     GSTTLPMKVFASVRMGISPKINALATLLVSAVSIAAVIGWYINARAEKRRQRDLQLAR
                     QDNG"
     gene            20319..21683
                     /locus_tag="QEL58_000707"
     CDS             20319..21683
                     /locus_tag="QEL58_000707"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017357075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent succinate-semialdehyde
                     dehydrogenase"
                     /protein_id="HDS1675221.1"
                     /translation="MTVEIVDPATGLVTYRHELMGAADIEQRLQAAAEAFLGWADRSL
                     QERGAILRQIAAQLRARRDDLQQAMTHEMGKLKAEALAEVDKCAAACEYYAEHAADYL
                     KPQLIDTEAQRSYVRYEPIGCVFAVMPWNFPIWQVFRFLAPAFMAGNVALLKHASNVP
                     QCADLILAVCRDGGLPDGVFDVLHIDNDQAADVLRDARVKAVTLTGSERAGRSIASNA
                     GSQLKKSVMELGGSDAFVVLDDADLDKTVAAAVKSRFDNSGQTCIAAKRFIVVDAVAD
                     EFTRRFVEAAGERQYGDPDERGTTLAPMARADLRDELHKQVQASVAKGARVLVGGEPI
                     AGTHAGYPATVLDQVGPGMPAYDEELFGPVAAVIRVKDEAEALRVANDTRFGLGGSVW
                     TRDPVRGEGFAQHMECGAAFVNAIVKSDARLPFGGSKQSGFGRELADHGIHEFMNIKT
                     VYVA"
     gene            complement(21769..22791)
                     /locus_tag="QEL58_000708"
     CDS             complement(21769..22791)
                     /locus_tag="QEL58_000708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium and cobalt transport protein CorA"
                     /protein_id="HDS1675222.1"
                     /translation="MAGMSLPASASAPASANPACVINCVHYDDEGKRHDISLDAISDV
                     IASGNGFVWVGLYDPNDDVLLKLQEEFCLHDLAIEDARNAHQRPKVETYGNSLFVVVT
                     TAQMVDERIQYGETHAFLGPRFLVTVRHGASLSYAPVRARVEREPQLLKMGPSYCLYA
                     VTDFVVDNYLPIVHRFRDTLDLLEKDIFADNYKRSTVVRLYELKRELNKMRMAVAPLQ
                     DVLAQLRRYQGDLIPDEVKLYVRDVHDHAVRISDVIDTLREMLGTALSVNLSLVTLAQ
                     GETVKRLGAWAALLAAPTLITSWYGMNFSHMPELSEPWSYPLMIVGVGGVCVGLYRLF
                     KRAKWL"
     gene            complement(22798..24000)
                     /locus_tag="QEL58_000709"
     CDS             complement(22798..24000)
                     /locus_tag="QEL58_000709"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005408826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4105 domain-containing protein"
                     /protein_id="HDS1675223.1"
                     /translation="MVLPLAASAQPVAATPAPAVPVASAEAPAPRIGVVTMQPGTVFF
                     ERFGHDAIVVIDPASGEATSYNFGYFDPSEDDFISRFVRGDMMYYLVALPLQQDLSYY
                     DETGRGASVQWLDLRPDQARALAADLAERAKPENARYHYDYYTANCATMVRDTVDKAL
                     GGGLQSQLSGRSRGNTYRSESVRLASPAAWMWLGFDVGLGPFADQPLSRWQEAFVPMR
                     LADALRQARNSDGRPLVQSEQELLPHRIDPEPKEFARRWWPWLLCGLVIAAGVLALRS
                     RPRLLAGLALPFWLLCTIAGSLLVFLWGFSTHYAAWANRNLLLLSPLAVLLLPGAIAV
                     LGRRVPGRMFRIVLWLLAVQAVAALVLHWLSLQAQYNVQWIVLLLPVHVALAWVLGRR
                     PHLSETRP"
     gene            complement(24063..24944)
                     /locus_tag="QEL58_000710"
     CDS             complement(24063..24944)
                     /locus_tag="QEL58_000710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003488337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HDS1675224.1"
                     /translation="MSEDDSSSSPAEHSEKKRGWLERLTSAFSGEPHTRDELVAVLHT
                     AQEEGLIAADTLKMMEGAISVAELTVGDVMISRSQMVSLPVEAPFLELMRQVVESGHS
                     RFPVHGENKDDILGILLAKDLLRGVVADNGPANVRELLRPAVLIPEAKKLNVLLKEFR
                     LSRNHMAIVVDEYGGVAGLVTIEDVLEQIVGEIDDEHDEAEDPSAQIAIQSDGQYVVD
                     ALTPIGDFNERFGATFSDEDYDTIGGLVTEAVGHLPEVGDELALDRFMFRVARADARR
                     VQAFHVTVLPPDAQDDA"
     gene            complement(25009..25617)
                     /locus_tag="QEL58_000711"
     CDS             complement(25009..25617)
                     /locus_tag="QEL58_000711"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019337146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675225.1"
                     /translation="MAPHRLRIPPVSLRCCLILLGALAAPPAFASSLDLPALIECRQR
                     VADLGALAPLLADPLKAVALGLQPLPQGNQFMSEYRLAQPITVFGVATERVAVAGASI
                     MAVLDQADPRPLAKRLGLETGYDQDGKFIAGRELVSRDVTDPKTGEAQIESIILSVST
                     VASHPGKTLAGCTYSLDLPEEEAPARPELAPPPITGPGSDGH"
     gene            complement(25617..26225)
                     /locus_tag="QEL58_000712"
     CDS             complement(25617..26225)
                     /locus_tag="QEL58_000712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008268409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675226.1"
                     /translation="MIQQGSFITLLIVGGLFAALLVLGVRTVRRIAATDPTGQHWLLR
                     GLALLSPLCLVAGLAIGMIGPYLNDRAQPAHGPGLLTISMLLMLAGALALPVLWRMML
                     QRRLGRPANGLPFFHASRTSLLVLYVLAAVYMMLIRNAGPNPMPWMMDAGLVPTVAWA
                     IAGLVHLAMLSVLITLPLMFLRAVMIGVARRITRPFTRSSGL"
     gene            complement(26278..26763)
                     /gene="ybeY"
                     /locus_tag="QEL58_000713"
     CDS             complement(26278..26763)
                     /gene="ybeY"
                     /locus_tag="QEL58_000713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016901623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA maturation RNase YbeY"
                     /protein_id="HDS1675227.1"
                     /translation="MTRGPVRLDVAVSYALPRSGLPAAVSFRKWVAAALKGRIREADL
                     AIRVVDAKEGQSLNRHYRGKDYATNVLSFPAEMPEGLPKGVKFPLLGDLVICAPVVAR
                     EADEQGKALNAHYAHLTVHGVLHLLGWDHEDDKEAEAMEQLEREILAELGIADPYAGE
                     R"
     gene            complement(26760..27746)
                     /locus_tag="QEL58_000714"
     CDS             complement(26760..27746)
                     /locus_tag="QEL58_000714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhoH family protein"
                     /protein_id="HDS1675228.1"
                     /translation="MKSIEHRDFTLSPEDNERLANLCGPFDGHLRQIELKLGVEIANR
                     GFVFRISGPEEAIVEAQKLVEALYAEAGETTFDNHAIHLRLAQANVEQIAERSYEAQD
                     VAIKVKRGTVRGRGANQGRYLHQIATHDINFGIGPAGTGKTFLAVASAVEALNESRVQ
                     RLILVRPAVEAGEKLGFLPGDLSQKVDPYLRPLYDALYEMMGVEKVVKLLEKNVIEIA
                     PLAYMRGRTLNDAFVILDEAQNTTIEQMKMFLTRLGFGSTAVVTGDLTQTDLPKHVRS
                     GLRDAIDVLRGVEGVSFTFFESRDVVRHPLVARIVSAYDRRDLHQIQPGATP"
     gene            28120..31302
                     /locus_tag="QEL58_000715"
     CDS             28120..31302
                     /locus_tag="QEL58_000715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008264699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system tip protein VgrG"
                     /protein_id="HDS1675229.1"
                     /translation="MDASLAHAALASLVGLEPDHQLHRLRADGLPPLFVEQWWGHECL
                     AGGFDYWVDVLHPDAGLAFGEWPGREAALVTRLDDGQDHLRCGYVAAAHRLDSEGGLA
                     RYRLHCVPWTWLLGHARHSRVYQERTVRDIVEDVLGGHGELACWRWSEDAVAALAEAP
                     ARSYCVQYREPDLAFVQRLLAEEGIAGAFESDSGGRLTLVLFSDSRAQPENPQSARDG
                     GIRFHRNDGTEVADTLQQLGARRLLGSNRLSLVTSDYRGPVLRHVQLPLQAGGQSPRE
                     IYDPVGAHAFAQAADGQRRARRVAEAHEAGLAGWLGTGSVRSLQAGRFIRVLAAGTAA
                     APTLLPTEVLHHGCNPPPITQGRGQRRAEPPAPWLAASAALPGAPLEASSALGYANRF
                     RAVDQRQPWRPVLQDGTGERINPRPLAPGYQTARVIAGDGRSDADLHADSQGRVRVRL
                     HLQGATDAEATCWMRVAQRYAGPGVGSQFLPRVGQEVLVGFLEGDIDRPLVLGALYNG
                     RGDAGAAPTPAGAAAAGSDAGLFGQAADRRPSAQGNAAGGHAPAWHAMAPGEGQHRHA
                     GALWGIQSREWSGTGYNRLVFDDSDAQLRLQLASSHAISELNLGHLRHQADNHRGSLR
                     GEGAELRTDAWGALRAERGAWLIAHPRAPASPAGEAVAASALLQQASTLAGSWHAMAT
                     THRAVGMASHAPPDDSAGLAGLQRVARASVPGQDYAQARAGGEGRPTGGAVPHTEEPM
                     LGLHGHAGLAMVAGQALQWSSARHVVLASGQHSDASVAGSARLHAMQAVGVLAASGRT
                     FVGEAALSVVAGQAALDVRAQSAQINVQSRASLRAASAQAAVELAAPRTLHIATAGGA
                     SLTLEGGNLVVNCPGTITVHAGQKSFVGPAQLSYALPDMPTSTLSEQIPKLAFRLQDI
                     PGPQGHPLAGQPWKIVRTRRALDEDMRDGALVPGNWAETVAEGQADEQGDVSLDDALC
                     AKIWNDAGRFPGRLFLVHGIDVIPLQRPRPYSSSPGVRATMDTLEAINYGKTLADLPD
                     DAALYAYRQRAEYEFQSHIDADPAQRKEIQ"
     gene            31302..34514
                     /locus_tag="QEL58_000716"
                     /pseudo
     CDS             31302..34514
                     /locus_tag="QEL58_000716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008264816.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase"
     gene            34595..36109
                     /locus_tag="QEL58_000717"
     CDS             34595..36109
                     /locus_tag="QEL58_000717"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675230.1"
                     /translation="MKFGWITMLFCFPIVAGASGAGIEPWGEVPKNVQVRFSPDSRGV
                     VRVSGDRPTILAPNVAIRLTSPDEIENKPFDRDGGAVVYLEPNSGSGLRVVREEKWVR
                     REAVFRKVPADIPEAVGRVYPYFKVESSRRFIYDDQGRIESVILDDSGGRSQVQFCAL
                     YDAAGRVAVATSTDNNPVSFDHDFNCETLRGTPSLSMTEYFQYGNYGALKRKLSKSLV
                     QPGQSQESGAGAEDRAVEDGSWRGYGELYYVNGSNGVGYDSLVFGMSDARGIEYFETT
                     NFSVASSDVTPVFAHRSQEASHKLRYTFTGERVPPDLAKGLLEGVVGYARVRQYYHST
                     GQRVFEVFAPGAKYPRERQWRTLDLNRQENYDAKGKLTRVILSGPVSGDAYTENLRAY
                     ADKGVLKLTPLTSGYSSYRVYDYDAAGRETLSFVCWRYEVSTNKPYAHFPWWEPDPRP
                     KRSREAELQYGRTQVGTRCGTPDGKMSVEGMGPVKKLMETKYGFGTTKLGLPGE"
     gene            36166..37419
                     /locus_tag="QEL58_000718"
     CDS             36166..37419
                     /locus_tag="QEL58_000718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008264816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675231.1"
                     /translation="MARGTELTPLSDPLVAAIAARIRRAIVAGQGFHVYITLPVHPEG
                     SLFDGAVLKQQYWVQQTLLRGDDSLIRRICRSLIARDKDIREASVEEADLQAEVKAGR
                     WKEYLSVMNLRSYGVLADINHKNHYTPHTIGADQATPLYVVTEQCYVHSKLLIVDDAV
                     AIIGSANCNDRSLLGTGDTEIAAVIVDGAAKSMDLGNGVQVITRKFARDLRMKLWRKF
                     LGQALETKPEKGGQFVFSNATEDYYPWFSEKVPTLEVDKPASARTWMGIRQLADANSE
                     AYQRVFTNVPRDSFPRYDSVFHGFPAAGLSDKGHVRRMLYAQPADLQSDFMKEPSVVN
                     DYVTDAVGRHDVRKATDFLRGTATRRGIQGFWVTMPLLWGSDMDDPAAAMPSEIIAAL
                     PVQGNRSSELACSTRHAALSQGEKV"
     gene            37416..38978
                     /locus_tag="QEL58_000719"
     CDS             37416..38978
                     /locus_tag="QEL58_000719"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675232.1"
                     /translation="MSEYLLLKALIAVSALCAVQAAHAGCSSKNEGDGRFQGHSMVVK
                     FTPSLDGGGDAVGASLSRANEVAPYIRIRTGPDLAKLNNVPFDSNGGSVYYLETTGQG
                     QRICRAEEWRRRESKLIGEAPPRSLHPAVKLLYPYFELHKAHELDYDTSGQLTSIQQT
                     GTSGRKVTTFCALYDENGRVEVANEISGVSVSDDADFTCPQLRVKASKSNAWYFTYRP
                     DGSLASDLTKKATRKAGEDPYREDIGIGTEATDGAWYASGSIYIGDANQRTRIGSMFH
                     GSEKGGISGIEDYSFVIAPADATALFAERSQDGQQKLVYRFPGERVPMEVATGLFEGI
                     TDYTRVREYRHRSHSRIFEIFSPGAKHPRERQWRTLDLNRQENYDAKGKLTRVILSGP
                     VSGDAYTENLRAYADKGVLKLTPLTSGYSSYRVYDYDAAGRETLSFVCWRYEVSTNKP
                     YAHFPWWEPDPRPKRSREAELQYGRTQVGTRCGTPDGKMSVEGMGPVKKLMETKYGFG
                     TTKLGFPGEEKD"
     gene            39226..40182
                     /locus_tag="QEL58_000720"
     CDS             39226..40182
                     /locus_tag="QEL58_000720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family efflux transporter periplasmic
                     adaptor subunit"
                     /protein_id="HDS1675233.1"
                     /translation="MVMGNGMRGFGLVGLALLAGCGQAPPTALGTLEWDRITVPAPAA
                     EVIAAVEVREGQQVKAGTVLMQLDPARGDAQFAAAQADTARAQAQLEELKIGPRQEQI
                     AQAQAQLAALRAESVEASAYYRRVQPLARQRLIAAAELDRARAAAGNAEASVLAAEQA
                     WLELVHGSRAQDIAQGQAAADAAQAQQVVQGVNLQKLQLRAPRDGVVDALPYRQGDQA
                     PIGAPLAVMLVGERPYARVYLPQPLRLQVKVGQAAQVHLEGQAAALKGHVRSIRSEPS
                     FTPYYALTGDDVARLSYLAEIEVDEATDMQKLPAGLPVRVSF"
     gene            40203..41126
                     /locus_tag="QEL58_000721"
     CDS             40203..41126
                     /locus_tag="QEL58_000721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014646575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDS1675234.1"
                     /translation="MHAQGLTRRFGDLLAVDNVDLTVPRGQVYGFLGPNGSGKSTTIR
                     MLCGLLEPSAGQIEVLGLSVPEQAEALRRRIGYMTQRFSLYEDLSVRENLEFLAAIQD
                     LPRAQAGQRVDALLQQYRLQDRQPQLAGTLSGGQKQRLALAGAVVHAPELLFLDEPTS
                     AVDPESRRDFWEALFELADAGTTVLVSTHYMDEAERCHRLAILDRGALVADGTPAELC
                     ARLQGRTLQVTSSQPRQASRALADLPGVLSVAQIGTQLRVLCSEDAADMAALQRALAG
                     ADPQAHIEAVAPNLEDVFVAATRGRGREPAA"
     gene            41123..42235
                     /locus_tag="QEL58_000722"
     CDS             41123..42235
                     /locus_tag="QEL58_000722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005408835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDS1675235.1"
                     /translation="MNLRRLWAIMLKELRQLRRDRITLAMIVGIPVMQLLLFGYAINL
                     NLRHLDAGVADQANSAASRALVQDMVATGVITPRSEAYSPDQLMQALRRGEISVGIVV
                     PADFERRRFDGREAVQVLVDGSDTVVQSAAIQLAQVPLDTRPTSNTRPLREGSIASGQ
                     VSVTSFYNPQRRSAVNIVPGLIGVILTMTLVMFTAVAVVRERERGNMELLIATPVSRS
                     ELMVGKVLPYAAIGLLQTTLVLVLGTWLFQVPIRGSLLDIYLAAVLLVLANLALGLLI
                     STRARSQFQAMQMTLFLFLPSILLSGFMFPFAGMPRPVQWLAEVLPLTHFLRLVRGIM
                     LRGASLWELWHDALALLAFIVVMMTLAILRFRKRLD"
BASE COUNT         7287 a        13516 c        14274 g         7165 t
ORIGIN      
        1 cgctggttca gagcgcttcg agttgcttgc gcagcgcggc cagctgcgcg cgcagggtgt
       61 cgttctcgcg ggtcagcgcg acgacgcggc gacgcagcgc cggtgcgtcc tcgcccagct
      121 gctccagtgc cgacagcacg tcggcgtcgc ggctggcgat cgcgtcctca tccggctcct
      181 cgaagtccat ctcggccgcg tccggcttcg gggcacgcgg cttgcgcttg gactcgcgca
      241 cgcgcttggc ggcctgcttc agttcgtcct tgccaccggc ggcggcggcg cgctgctcgt
      301 cttccggcag gtcggccacg gctgcggcgg cgctgatcga gatcacgccg gccttcactg
      361 cttcgaccac ctcggcggcg gcctgggcat ggatgcgctc gatcatgccg acctggctgg
      421 tgctcagctt ggcttcgcgg gccagctcgg cgcggctgat cttcggcgcc ggttcccacg
      481 gcgggctgtc ttcgccggcg tcctcgacga tctcggcgct gccgtcgctc tcgcgctgca
      541 gctgcgcctg ctcgacctgc ttgcgggcag ccaggatgtc gcgcttgcgc agcgccagca
      601 cgccgcgctg gaagtccgaa acgctgcggc ggcccaggtg ctgctcgatc atccacaggt
      661 gcacgtcttc catgctctgg aagcgggtgt tctgcacggt gttgaacggc aggccgtgct
      721 tctggcagat gccgaagcgg ttgtggccgt cgaccagcac atcgccccac agcaccagcg
      781 catcgcggca gccttcggcc aggatgctgc gctccagcgc gtcatgttcg tccgcagtca
      841 gcgggtcgat gtaggccttg agttcttctt tgacgacgat atccatgggc acggcagcga
      901 gcaggagcgg aaccgcccat tgtacctgct cgccaccacc ggcccgggct caggcggtgg
      961 cccggatcat ctcgccgagg atgccggtga tctggtcgat ctgcggcttg tccacgatca
     1021 atggcggcga cagcgcgatg atgtcgccgg tacagcgcac cagcagccgg ccgtcgtgga
     1081 agcagcggcg gaacacctcg tagccgcggc tgccgggggt gtcgcggcgt ggcgccagct
     1141 ccaccgcacc gaccagcccg aagttgcgga tatcgatcac gttgggcagc ccctgcaggg
     1201 cgtgcaaccg ctcctgccag tattcaccca gctcgatggc gcgctcgaac aggcgctcct
     1261 cggcatagac ctccagcgtg gccagcgccg ctgcgcaggc cagcggatgg cccgaatagg
     1321 tgtagccgtg gaacagctcg atcgcctgcg ggggcgcctg catcaacgcg gcatgcaccg
     1381 catcgctggc cagcacgccg cccagcggca ccgcaccgtt gctgaccgcc ttggcgaagg
     1441 tcagcaggtc cggggtgacc ccgaaacgct gcgcggcaaa gggcatgccg acccggccga
     1501 agccggtgat cacttcatcg aacaccagca ggatgccgtg gtggtcgcac agctcgcgca
     1561 gccgctgcag gtaacccggt gcgggcagga tcaccccggc cgaaccggcg atgggttcaa
     1621 cgaacaccgc ggcaatggtc gaggcatcgt gcagcgcaat cagccgttcc aggtcatcgg
     1681 ccagctccgc gccctggcgt ggcaggccct tgctgaacgc attgcgctgc aggtccaggg
     1741 tgtgacgcag gtagtccacg ccgcccagct gcaggccgaa tgccctgcgg ttgttgggca
     1801 ggccgcccag tgccatgccg ccgaagccga ccccgtggta ggccttctcg cggctgatga
     1861 agcgggtgcg ctggccctcg ccgcgctggc ggtggtaggc cagcgcgatc ttcatcgcgg
     1921 tatccaccgc ctcggagccg gagctggtga agaacacatg gttgagcgcg gccggcgcca
     1981 gtgcggccag ccgctgtgcc agtgcgaagg ccggcggcga gcccatctgg aaggccggtg
     2041 aatagtcgag cgtgcgggcc tgctcgacga tggcctcgac gatgcgtggc cgcgcgtggc
     2101 cggcgttgca gcaccacagg ccggcggtac cgtcgaggat cgggcggcca tcgacatctt
     2161 cgtagtgcat gccctcggcg cgtaccagta cacgcggcgc cgccttgtac tggcgattgg
     2221 cggtgaatgg catccagtac gcgtccaggg actcggggcg ctgggtggcc aggtcgtgca
     2281 ggtcgctttc gggacgcttc atgccagctc catcgggtgc gatgcgacga atgtagcgca
     2341 gctgcgtcac ggcgaagtcg cggcggcccc ggtataagca aggctggttg attgcaggag
     2401 tgtcccatgg ccgatttccc cgaccgcagc cactggcagg cgctggcact ccagctgtcg
     2461 atacccggcc aggccttcat cgacggccgc caggtcgacg ctgccagcgg cgcccgcttc
     2521 gactgcatca gccccatcga cggtcgggtg ctgggtgcgg tcgccgactg cgacacgcag
     2581 gacgtggagc gtgccgtgct ggcggcccgc cgctccttcg atgcgggcca ctggtcgcag
     2641 gccagcccgg cgcatcgcaa gcgcgtgctg ctggcgctgg ccgcgctggt ggaaaaacac
     2701 gccgacgaac tggccctgct ggaagccctg gacatgggca agccggtacg cgatgcgcgg
     2761 cgcatcgatc tgcccggcgt ggtgcgctgc ctgagctgga ccgccgaagc ggtggacaag
     2821 ctgtacgggg agatcgcgcc caccggcccg cacgaactgg ggctggtcac gcgcgaggcc
     2881 gccggcgtgg tggcggccat cgtgccgtgg aatttcccgt tgctgatggc ctgctggaag
     2941 atcgcgccgg cgctggcgat gggcaactcg gtggtgctca agccttccga gcggtcgcca
     3001 ttgtcggcgc tgcggctggc ggcactggcc gccgaagcgg gcctgccgga cggggttctg
     3061 aacgtgttgc ccggccatgg agcgcgcgtc ggcgaaccgc tggccctgca catggacgtg
     3121 gacgtgctgg ccttcaccgg ctccaccgcc actggcgcga agctgctgga atactctggc
     3181 cgatccaacc tcaagcgggt ctggctggaa tgcggcggca agagcccgca cgtggtgttc
     3241 gcagacgccc cggacctcga tgcggcggcc aagggcgtgg cgcagggcat cttcttcaac
     3301 cagggggaag tctgcaccgc cggttcgcgg ctgctggtgc aacgctcgat ccgcgaggat
     3361 ttcgtccacc aggtggtggc ctatggccag cacatgcagc cgcgccaccc gctggaagcc
     3421 gacgcaccga tgggcgcgct ggtcgatgcc gcgcatctgg acaaggtgat gggcgatatc
     3481 gcgcgtgccg aaggcgaggg cgcccgattg ctgctgggcg gtcatcgcgc cgaggtggaa
     3541 gcgggcggct gctatgtgca gcccaccgtg ttcgaccagg tgcggcctga gcaggccctg
     3601 gcacgcgagg aagtgttcgg gccggtcctg gccgttctgg gtttcgatga cgaagccgaa
     3661 gccgtgcgcc tggccaacga cagccgctat ggattggccg ccggcctgtg gacacgtgat
     3721 cttggtcgcg cgcatcgcgt tgcacgccag ctgcgcgccg gcagcgtatg ggtgaacggc
     3781 tgggatggcg gcgacatgac cgcccccttc ggtggctaca agcagtcggg caatgggcgc
     3841 gacaaatcct tgcacgcgtt cgacaagtac agcgagatca aggccacctg gatccagttg
     3901 tagcgtcgga gttgcccgcg cttctgtaga gtcgagccac gctcgactgc tctccgcgag
     3961 atgcagaagg gcaaaagccg tcgagcaagc tcgacgctac ggaagcgccg cgtttgagta
     4021 gaggcgagct tgctcgactg ccgttcgcgg aatgcagatt accggcagcg tgcactcacc
     4081 tgcaggaccg cagcacgcag caggtcgcga tcggcctctt caaccgcatt ctggaagtag
     4141 tccatatcct gcttccccag ctcgcaaggg tcgacgatat acccgggcgg ccacagcccc
     4201 agcagctgcg ccacgccgtg cacgatctgc tccggggtca tctgccggcg gatgcggaaa
     4261 tggttgcggc gcggtgcgaa cgcagcatgc acctcgcggc gaccgatcag gcgtggcgcc
     4321 acccccgccg cgctgatgcc atcgccaccc tcgatgctgc ccgcaggcag gcccaggatc
     4381 agcggcgcct cagccgccgg tgccccttcg gcgggcaggg cggtctccgc ctgcgcaatc
     4441 ggggcagggt ggggcttcac cgatgcagcc cggcgtgtca tcggtacgga gggcaacgcc
     4501 ggaagtgacg gcgccggcgc cggcagctcc ggtggcagcc agcgcaacga gatccgtgcg
     4561 ccatcgtcag cacgcagcac gatccggcca ctgccccaca accacagcgc catcaggcca
     4621 tgcaccagca gtaccaccag ccacgccgcc atgcgcggca gcttcgggga atcggaccac
     4681 gacaacgcaa ctgcagccat cggcaaggca tccatgcagg gaccggtggc gcagcctagc
     4741 gggcggcccg aaaaatttcg ttggcatcgg tgtcggctga aaccattgcc ccgtgtggcc
     4801 accggcccgt ggcagaatcg ggcgatccac cgttacccgt gttgccgatg tcgacgaccc
     4861 gcgctgccgc accgcccgtg aattcccccc gccgcgtcct gctggccagc ctgatcggca
     4921 ccaccatcga gttcttcgac ttctatatct acgccacggc cgcggtgctg gtgttcccgc
     4981 acctgttctt cccggacagc agcgaacagg cggcactgct gcagtcgttg gcgaccttcg
     5041 cggtggcgtt cattgcccgg cccgtcggct cggcggtgtt cggccacttc ggcgaccgca
     5101 tcggccgcaa ggccaccctg gtggccgcgt tgctgaccat gggcctgtcc acggtactga
     5161 tcggcctgct gccgacccat gcgcagatcg gcctgtgggc acctgcgctg ctggcgctgt
     5221 gccggttcgg ccagggtctg ggcctgggcg gcgagtgggg cggggcggtg ctgctggcca
     5281 ccgagaacgc gccgccgggc aagcgcgcct ggtacggcat gttcccgcag ctgggtgcgc
     5341 cgctcggctt cctgctgtca gccggcatct tcctggtgct gggccgctgc ctgagccagg
     5401 acgacttcct gcagtggggc tggcgcattc cgttcgtggc cagcgcgctg ctggtcggcc
     5461 ttggcctgtg ggtgcgcctg aacatccacg agacccccga cttcaagaag gcgctggaac
     5521 gcaaggcgcc ggtgcggctg ccgatgctga cggtgctgcg agaccacccg gtgccgatgc
     5581 tgctgggcac gttgggggcg ttcgccacct tcgtgctgtt ctacctgatg acggtgttca
     5641 gcctcggcca tggcaccgcg gtgctgggct acagccgcga acagttcctg ctgatgcaga
     5701 tggccggcat gttgttcttc gcactgggca tcccgctgtc ggcacgctat ggcgaccgct
     5761 ggggcacgcg ccgcacgatg atcgtggcca gcgtgctgat cgtcggattc ggcgtgctgt
     5821 tcgcaccgct gttccagccg cacagcccgt ggctggttac cggcttcctg tgcctgggcc
     5881 tgttcctgat gggcctgacc tacgggccat gcggcacctt cctggccgag atctacccgg
     5941 tggaggtgcg ctataccggg gcgtcgctgt cattcaacct ggccggcatt ctgggtgcgg
     6001 ccccggcacc gtacctggcc acgtggttgg ccgaacactt cggcctggtc gcggtgggtt
     6061 actacctgtg cctgactgcg gtggccaccc tgtgcgcgct ggtggcactg caccggcgcg
     6121 cactgcggct caaccaaaga agcgcttgag cgtgcgcccc agccagccgc cgccctggtg
     6181 ctcgcgggcg aactggttca ggtgcgcctt gacctgctcg gcgtaggcct ggtcatcgcc
     6241 acggatgtgg ttgaacagcc agcgcgagag catggtgcgc agctcgtcgc tgatgtcctc
     6301 gccggcctgg aagcgcagcc ggtactcggc cacgcgcttg atgaagacct catgcacacg
     6361 cttgtgcgcg gcacagaacg gataacccgc ctcctccatc agctcttcct cgaacgcgaa
     6421 gtgcgacatg gtgtagtcga ccacttcatc gatcacttcg cccaccgccg cacgctgcat
     6481 gctggcctgg gccacgtgca ggtggttgag catctcgatg atgcggcgat gttgctgatc
     6541 gatcacatcg atgccgatgt tcagatcgtc ctgccagacc agtagtgcca tccccggctc
     6601 cccttcatgc gtatgtcggg gccgactgta gaaccgcggc gcgcgggcgg cgttgatctg
     6661 gatcaaggcg tgccggtcag ggcagggcgg gctcgcgtgg gcgcaacgga ctggccatgg
     6721 tggtacagct gacccggttg cggccgccgg ccttggccag gtacagctgg cggtcggcct
     6781 cggagatcag ccggtgcagc gcatcacgct gcgggcgcag gcagcacagg ccgatgctga
     6841 cggtcatgcg cagggtggcc gagccgatgt ccacttccag cgcggcgatg cgctggcgca
     6901 gttcctcgaa gtacagcagc gcctcgtcct gttccatgtc cggcaccagc aggcagaact
     6961 cctcgccacc gaagcgcgcg atcaggtcct ggctgcgcgc gtgcgcggcc accgcgccgg
     7021 ctaccgcgcg cagcgcatcg tcgccggctt cgtggccgta ggtgtcgttg atgtgcttga
     7081 agtggtcgat gtcgatcatc gccaccgcca cgcattggcc gtgcagctgc agctgcggca
     7141 gctggcgctg gctctgctca aggaaacaac ggcggttggg caggccggtg aggaaatcgc
     7201 gggtggccag gtcctgcagg gtgccgatca gttccagctg gtccacgttc tgcgagaccc
     7261 ggcagaagaa ctcctcgcgc gagaagggct tgcgcaggaa gtcgttggcg ccgttcttca
     7321 ggaagcgtgg gatcagtgac gcatcggtat tgccggagat gccgatcacc gccaccttgt
     7381 cgcgcgagcg cagggtgcgc aggcggcggg tgaattccac accctgcatg ccgggcatct
     7441 cctggtcgac caccgccagg cggatcgccg gatgcgcctc gatcgcggcc aggccttcgt
     7501 tgccgtcggc ggcctcgtgc acctcatggc catacatgcg cagcagggcg gcggcgtagc
     7561 cgcgcgcgga gggcgaatcg tccaccacca gcgccgcgat gcgacggttg cgctccagcc
     7621 gctgcaccag ccagaccagg taatcgatgc tgccgggggt gttcttcagc acgtagtcga
     7681 tgatctgctg ctgcagcacg cgcttgcgca ggtcttcatc gtagacgctg ctgaccacca
     7741 cggtcggcag gccgcgcttg aggaagaact cgaccaccgc atcgcggtcg ccgtcggcca
     7801 gcaccagccc ggtcagcacc aggaaccagc ccccatcctc gctcagcagg cggtcggcct
     7861 cggccagggt ggaggcgatc accaccggca gttccaggcg ttgctcgatg gcctcgcgca
     7921 gcatgccagt gaaagcacgg gagttttcga ccagcaggat ccgctgtggc agcggatcgg
     7981 ccaggtcgcc atcaacggcg gcctgcggca gcacgggcat gatgcggtgg ctcacgaggg
     8041 agggctcggc acggatagcg gcagtttcgg gtgcaacttt agccggagcc ctcggttgtg
     8101 gacatatctg ccctgcctgg ttcgggtcag ttcgccggga atctctagga caacagggtg
     8161 agattcgaac gcactccctt catggcgctc acggcgcggc atggttatgc tgggtcgcgc
     8221 cacccctact ggtgcattgg acacggctgc gtcgaacgaa ggaacccttc aagcgaggtc
     8281 gagcgccatc cagtcgtggg gtggcgaaac ggaattgcct ggagctgtca ttccaaccat
     8341 ccatgggggt gagcgtgaga ttttctgaac tgcgagtgtt gcttcctgcc gctgtcctgc
     8401 tttctgtgtc tgctttcagc gcatcagcgt gttgccccag tggcgacaac ggaatccata
     8461 tggctcggag cggtctggga gaatctctgc cagcagccac gaatctgagt ttgaacccaa
     8521 actggcttgt ctatgggttc gagcgtgatg ggatcagtta ctaccaagtg aatgatctct
     8581 cgggtcaggt cgtgctgatc gtgggaaatg tcgacgccac gttctggacg ctgccggcgg
     8641 gcaagagtgc ggctaaggtg tctttgccct cgcatcgact gagtttgccc gagaaggttg
     8701 tccggcgcgt ggtgttccag agtgctcagt tctcgttggt tgtctatgga gaaggtgcaa
     8761 gcgctgtatg ggtcgtcgag tctatggata ccgcaggctg aggacactct cgttggcgcc
     8821 acgattgcgc atatcgacga agcaggagcc ggggggggcg gctcctgcca tgatctgatc
     8881 gtgccggcct tccgttccga tggctggcaa gagtcaggct atgtccgctc ggcttgccca
     8941 ggcggcctgc atgctgcttt gcgcgccgct ggctgcggtc tccaggagca gcacgcgtac
     9001 gcagttccct tcgcagtgca ctttccctcc ataggcttgt gcgcgggaac tcagacgttc
     9061 aatagccaga cgtgttgtgt cgagtagcag atcgcgatca cggtccagca gagcgattct
     9121 gagcagaatt ccttgttgcc ctttcaattt cccacagcga gcacgtatct ggatctgtcc
     9181 ttgttcctgc ttgagcagca atgaaacggc ctcggtgaga gtgcggtagg ccgccaactg
     9241 caagggaata ctcagtttgc agggatcccc agtcaggaag ggggatgtga tcctatgtgt
     9301 ctgattccag ctttcacgaa tgccgctgac ctgcagagcc aggtagagac cgacgtgctc
     9361 gacctcggtc ggatagacca tgctggtcaa ttcgcggaat tggcgggaat gtgcggtgga
     9421 tgtgagaagt agatccactg ccggcgagtg atggccatgt gtcttcaaca ggtcggctgt
     9481 cctgctcaag gaagcttcaa tgtcatccgc gattctcctg agatccaggg cacgctcccg
     9541 cagatccatt tcgcccgcca tatgagcgga ccttgatagt cgtgcagcct ggtgcccgtc
     9601 tacgtctcta cgcccccgct gatgatagtg ccggctgatg cgtgagccga gtgccagcag
     9661 cccggttcct gcaatggcga tcagctgctg cgtcgtgaag gttcgttcat cgtatgagcc
     9721 aaggaggccg gatgtaggag taaccactgc aatgagaatg ttcaacaggg ggacgccaac
     9781 ggctgctccc tgccagccat gaatacatgt caacacgatc acgggcagcg ccatggtcaa
     9841 ctgcagactt gtcttgcttg catccgacaa gccaggggcc attgcggtaa tcagacccag
     9901 tcccagcatc actgcaagag cggcgacagt cgggggagag cgccagcgtc cccattcgtc
     9961 cattgcatgg cgcctgctcc agagaaccgc cagtggcgca accgtcagga tggcaatgta
    10021 gtcaccaagg acgaagcgta cggcccttgt cgcaatcggc acgcttgaag ggttctctga
    10081 aagcaagtga gacagcccaa gcttgagggc agtagcaatc actgcggctg acaccgcgac
    10141 cgaaagcagc catccatctg ccctggcagt catgaatttt cgatgcgcat atacaaccag
    10201 agcaacggct ggcagcagga atgccgaacc caggattacc catgccagcc catactcatc
    10261 tatcaacggg tagcgcagtt gtgcgaagta cgcgtactcg ccaataagca ggtagggcca
    10321 gaggcgaggt ggacacacaa gcaaagccgc tacgcgaatg ccggcaggca ggtaaaactg
    10381 gtccagcgaa acccgccaag cggcccaaca cgtaatcgcg tacatcacgg caatcgccag
    10441 ccccaagggc cgcacgcgga acgtcagttc aattcccctc ttccaccaat tcaacccaag
    10501 cctccaatgc tcgtgacatg gcggcggccc cattgcttgt ttgaacgcgc cattgggtga
    10561 cagtatccat agaagcacgg gcgcgcaatc acacgagctg gaccgccttg gcgggggggg
    10621 caaggcggtg ccgaacaaag atcaccttcg agtagtgatc tgcatctcgt ttctatgagg
    10681 aagtcaggtt gcggcccgcg gagcgcctgg gtcaatggag gatgtacgtc cccccaaagc
    10741 ttcggtagcg ctcgcctggc tggaacctcc ccgcgcttcc gtcaatacga tcctgagtct
    10801 gttgccactc atgtccatgt ggccaccatg cacaagaatt cggcccagca actgctcatt
    10861 tgccagttcc gtggtccgga ttcccaaaga ttcgttccga cccacgaggg ctacgcagat
    10921 gaatacaccc ggattccggg cgaaacatcc acagcggatg ctgaccgaaa tttgtccgga
    10981 ttcgcatctc agtagaagtg ataccgcatc aactacaagc cggtaggccg caagctgcaa
    11041 gcctaccccg agcgcgcagg ggtcacccat caacctgggt tgcccgattc gatgcgtggc
    11101 gttccatgcc tcacgcactc cacccgcctg caaggccacg tacaggccca gccgttccag
    11161 ggcggcggga tagatcatgc tggcctgggc ccggaacagg cgtgaatgca cctccgaggt
    11221 atgccgcagg ctgtctgcga cagcgtgatg gccctgcgca tgcagccagt tcaccatttc
    11281 gttcagcgac aggtccatgc catcgcccag ttggcgcaga tgggccgcac gctcacgcag
    11341 gtccatctcg ctggccaggt gtgagttccg cgcaagcagc agggctgctc tgccatcttc
    11401 ctcgcgcaac cgatgctggc tctggaagtg ggtgatgcgc gcgcccagca gcagcagggc
    11461 gatgctggcg atggccatgg cctgctgggt agcgaacgtg gccgggtcga atgccgtcgg
    11521 atggtcggca ggggcgctca ggccaagcat catgttcacg gcggcgacac cgatggccgc
    11581 accgcgccat cccagcaggc aggtcagggc gatcgcggga ataggcagga ttaacagcaa
    11641 ctgcagtgag ccaggcgccg tgatcgaggc agacaccgga gtcgcctgca ggccaacgac
    11701 aagcatggct gcgagtgctc ctgccacggc agcaatggac cggaccgtcc attcttcctc
    11761 ggcccggcgg atccacagca gagccagagg cgccaggatc aggatgccgg tgaagtcgcc
    11821 cagcgcatag cgcagcaggt tggtgatgaa tgacgcgttg tgcaacggtt cccagagcag
    11881 gtacgagatc cccaggttca gcaggctgat gaccatcgcg gcgcatgccg caatggagat
    11941 cacgccgacg atcgtggtgc gtgccagcag cttccggtgc agccgcacga tcagcatcac
    12001 ggcaggcatc aggaacaccg aggcgaggat cacccaggtc aggttgtatt tgctgatcag
    12061 ggggatgcgt agatgcgcga agtaggcgta ttcaccgatc agcagataag gccagagccg
    12121 gggcgggcac agcagcagtg cggccacccg tacgccagca ggcaggaaga actggtccag
    12181 tgacagcttg cgcgcgcccc agcaggcgaa ggcatagagc agcgccagtg ccagcccctc
    12241 ggggctgacc cgtatcctca cctgcaggcc gtccttccac caccgcatcc acgtgctccc
    12301 ccagctcctg caccgattat gtggctggga agggttccgc taccacaacg catcccgcag
    12361 cttgtaccac gacatcgccg ccaccagcag cggcatccgc agcaaccgcc ctcccgggaa
    12421 gggcgcatgc cgcaggcgct ggaacacgtc caggcgctcg ctctggcccg caatggcggc
    12481 ggcgatgacc tcgccagcca gcccggcggc ggccacgcca tgccccgaga acccctgcgc
    12541 gaagtacagg ttgccatcca gccggcccca gtgcggggcg cggttgcggg taatgtccac
    12601 gtagccgccc cagacctgtt ccagcggcac gtcggccagt tgcgggaaga cctggtgcat
    12661 gcgccgctgc atcaccccgt gcagcccggg cgggggcagg gccgaataac tggcgcggcc
    12721 gccgaacagc aggcggtggt cgtggctgag gcggaaatag tccagtgccc aggcggtgtc
    12781 ggccacggcc atgttgttgc cgatcagggc gcgggcgcgc tgcgcaccca gtggcgcgct
    12841 ggcaccgata taggtgccga ccggcatgat ccgccgctcc agctcgggca gcaggccctg
    12901 cagccaggcg ttgccggcca ccaccaggtg cgcggcgcgc acgctgccct gcgccgtgtg
    12961 cagcgcgggt tgggagccgc gctggatgcg caccacgggc gaatcctcgt ggatgaccac
    13021 cccggccgcg cgtgctgcat cggccaggcc acgtgcatag gccagcggct gaaggtgcgc
    13081 gctgagcggg tcgaacatcg cggcgcggta gcgcgggctg tccagctgcg catgcagggt
    13141 gtcacggtcc caccactgca tggggtagtc gtagtggcgc tgcaggtgct cgcagttggc
    13201 gcgcagatca cgctcgtgac gctcgcggat ggcgacgctg gcgtggcctt ccacccaatg
    13261 gcagtcgatg ccatggcggt cgatgcgcgt acgcatcgcc tgcaccgcat cgcgcgacca
    13321 gtcgaacagg cggcgggcat catcgcggcc gagctggcgc tccagctcat ccacctcgca
    13381 gccgtagccg accagcgcct gcccgccgtt gcgcccggag gcgccccagc caatccgctg
    13441 tgcttccagc aggaccaccc gctggccccg tgctgcgagt tccagtgccg cggtcaggcc
    13501 ggtatagccg gcgccaagca cggccacatc ggcctgcaca tcgccccgca gcgcgggcag
    13561 cgcgggtggt tcgggcaggc tggcggcgta ccagctgggg gggaaggcag cgctcactgc
    13621 aggcctcgcg cttgccgcgc ggatggtcgg agtgggggag ggtgaccggt gttcacccgc
    13681 gtagtttcgc cgatggatga cggccatggt gtgacggtga tgacttgccg cgttcgtcgg
    13741 gcgacgggta acgtgcccat acgccaagga gttttcccat gcgccgcctg ccctgggtgg
    13801 gcctgcccac cgacagtacc gtgctcggcc atcaccgttt cgcggtggcc ggcgagaagt
    13861 acgtgcgcgc gctggtcgag gcggccgacg tcaccccgct ggtgttgccg agcctgcagc
    13921 cgccgttgcc ggcctgtgac tggctgcagg ggctcgatgg cctgctgttg accggggcgg
    13981 tcagcaacat cgaaccacag cactatgagg gcggccgcag ctggccgggc aacccgcatg
    14041 atccggcgcg tgatgccaat gccttcgcgc tgctgcagga ggcgctggcg ctggacctgc
    14101 cggtgctggc gatctgccgc ggcttccagg agttgaacgt cgcactgggc ggcagcctgc
    14161 atccgcagat gcatgtggtg ccgggcctgg atgaccatcg cgaggacccg caggcgccgg
    14221 tggaggtgca gtacggcccg gcccacgcgg tcacgctggc tgccgatggc tggctggcgc
    14281 agtggcacga gggcgagcgc gtgcaggtca attcggtgca tgggcagggc atcgcccgcc
    14341 tggcgcaggg gctgcaggtc gaggcggtgg ccgacgacgg gctggtcgag gcggcgcgca
    14401 gcctgcatca tcgattcgtg ctcggcgtac agtggcaccc ggagtggcgt gtcatgcagg
    14461 cgccgttcta tcacgctatt ttccgtgcgt tcggccaagc ttgccggcag caccaacaga
    14521 accgactgga ttcccgatga gttcccgaac gcgcccgcgc aagacggcca cgccccccgc
    14581 accgcaggaa agcagcctgc tgcgctggct gaaggagcgg cggatcaccg aggtcgaatg
    14641 cctggtgccg gacatcaccg gcaacgcgcg cggcaagatc atccccgccg acaagttctc
    14701 gcacgattac ggcacgcgct tgccggaagg catcttcgcc actacggtca ccggcgagtt
    14761 ccccgacgat tactacgacc tgacctcgcc gtcggattcg gacatgatcc tgcgtccgga
    14821 cccggacacc gtgcgcatgg tgccctgggc caccgacccg acggcgcaga tcatccacga
    14881 ctgctacacc aagaccggcg aaccgcacga gctggccccg cgcaacgtgc tgcgcagggt
    14941 gttggacgcc tatgccgaac tgggcctgcg ccccgtcgtg gcaccggaac tggagttctt
    15001 cctggtgcag aagaacaccg acccggattt cccgctgctg ccaccggcgg gccgctcggg
    15061 ccgtccggaa acggcgcgcc agtcctactc gatcgatgcg gtcaacgagt ttgacccgat
    15121 cctcgacctg atgtacgact actgcgacgc gatgaagctg gacgtcgaca cgttgatcca
    15181 cgagtccggc gcggcgcagc tggaggtcaa tttcacccac gccaacgcga tggacctggc
    15241 cgaccaggtg ttcctgttca agcgcaccat gcgcgaatcg gcgatgcgcc acggcgtgta
    15301 cgccaccttc ctggccaagc cgatggagaa cgagccgggc agtgccatgc acatccacca
    15361 gagcctggta cggatcagcg acggccagaa cgtgttcagt ggcgagcatg gcggcgagga
    15421 tttcagcccc atgttcgccc actacctggc gggcctgcag aagtatgtac cgatggccat
    15481 ggccttcttc gcgccgaacg tgaattccta ccgccggctg gtgttcggcg aggtctcgcc
    15541 gagcaacgtg cactgggggt tcgacaaccg cacctgcggc ctgcgggtgc cgctggatac
    15601 gccggaaaac atgcgcgtcg aaagccgttt tgctggttcc gacgccaacc cctaccttgc
    15661 catggcggcc accctggcct gtggcctgct gggtatccgc gagcgcctgg caccggatgc
    15721 accggtcagc ggcagtgcca aggaactggg ctacaacctg ccgcgttcgc tgggcgaggc
    15781 gctggatggc ctggaacagt gcggcgcgct gcaggcgctg ctgggcgagc gtttctgccg
    15841 ggcctacatc tcggtcaagc gcaaggaata cgagaccttt ttccgcgtga tcagctcgtg
    15901 ggagcgcgag ttcctgctgc tgaacgtctg agcatctgga atagaaaaat ccgccgccgg
    15961 ggggtaggct ggcacccgtc gccggtcccg ccggccctcc cttcccgcat tctggagcac
    16021 ccgatgaagc tgcgtatcct cacgctcggc ctggcctccg ccatgctcgc cgcctgtggc
    16081 ggtggcaaag gtggcgcgca ggacagccag gtcctgaacg tctacaacta cagcgattac
    16141 atcgccgagg acaccatccc caacttcgag aaggagagcg ggatcaaggt gacctacgat
    16201 gtgttcgaca gcgatgagat ggtcgagacc aagctgctgg ccggcaacag cggctacgac
    16261 gtggtggtgc cgaccctgaa cttcttcggg cgccagatcc aggccggggt gttcctgccg
    16321 ctggacaaga gcaagatccc gaacctggcc aacctcgatc cggcggtgat gaagcgcatc
    16381 gccacccagg acccgggcaa ccagtacggc gtgccgtaca tgatcggcac caccggcatc
    16441 ggctacaacg tggacatgct gaagcagcgc ttcggcggca gcgccgacat cgccaacagc
    16501 tgggacctgg tgttcaagcc ggaaaacatc agcaagatga aggactgcgg cgtgaccatc
    16561 ctggacacgc cggcggacat gatcccgatc gcgctgcact acctgggcct ggacccgcac
    16621 agcgccgacc cggccgagct gcagaaggcg gccgacctgc tgaagtcgat ccgtccgtac
    16681 gtgcagaatt tccactcctc gcagtacgtg ggctcgctgg ccaatggcgg cacctgcctg
    16741 gtggtcggct ggtcgggtga catcatccag gcccgcgacc gtgccgagga agccagcaat
    16801 ggcgtgcacg tggcctactc gatcccgaag gaaggcgccc cgcagtggtt cgacatgctg
    16861 gcgatcccga aggacgccaa gcacccggaa gcggcctacg cgttcatcaa ctacctgctg
    16921 cagccgaagg tggccgcggc caacaccaac ttcatccact acgccaaccc ggtgccgacc
    16981 gcgaccccgc tggtggacga ggcgatccgt accgatccga ccatctatcc gccggccgat
    17041 gtggccgaga agatgttcac ctattcgatc aacacgccgg agaccgacaa gctctacacc
    17101 cggctgtgga ccgaggtgaa gaccgggcgg taagccggtc cggcgccgcc gggcgatgcc
    17161 cggcgcccgc tccccgggag gggggcgggc cttgcccggc aagggcagtg gccgcgcagg
    17221 cgcggcccga ccggccccgc ccgcctgttg ccgtcatatc ccctgtgccc ccgggccgtt
    17281 agaatggcgg ccgctgtcca ccgcccgctc ccggagcccc catgcccgtt gaagcccagc
    17341 cggtagccgc cgtcgtcgac acgaccggtg tgcccggcta tctctccatt cgtgacctgc
    17401 gcaaggaatt cgacggtttc gtcgccgtcg acgacgtcaa cctggacgtg cgcaagggcg
    17461 agatctttgc cctgctcggc ggctccggca gtggcaagtc gaccctgctg cgctgcctgg
    17521 gcggcttcga gacgcccacc aagggcagca tcaccctcga tggccagcgc ctggacgcgc
    17581 tgccgccgta ccagcggccg gtcaacatga tgttccagtc ctatgcgctg ttcccgcaca
    17641 tgacggtcga gcagaacatc gccttcgggc tgaagcagga tggcctggcc aaggacgcga
    17701 tcagcaagcg cgtcggtgag atgctggagc tggtgcagat gggccacctg ggcaagcgca
    17761 agccgcacca gctgtccggt ggccagcagc agcgcgtggc gctggcgcgg tcgctggcca
    17821 aggggccgaa gctgctgctg ctggacgagc cgatgggcgc gctggacaag aagctgcgct
    17881 cgcagatgca gctggaactg gtcagcatca tcgaatcgtc gggcgtgacc tgcgtgatgg
    17941 tcacccacga ccaggaagaa gcgatgacca tggccacccg catcgcggtg atggatgccg
    18001 gctggatcca gcaggtcggc aagccggacg aagtctatga gcagccggcc aaccgcttcg
    18061 tcgccgagtt catcggttcg gtcaacctgt tcgacggggt gatcgacgag gacctgcccg
    18121 agtacgtgac cgtgcgctcg ccgctgttcc cggcaccgat ctacatcgcc cacggcatca
    18181 ccggttatga agggcagccg gtcgcgttcg cgctgcgccc ggagaaggtg atgatcggca
    18241 aggacgagcc ggaagggcac accaacaagg cacagggcgt gatcgaggac atcgcctatt
    18301 tcggcagcca ctcggtctac cacgtgcgcc tgcccagcgg cgccaaggtg ctggccaact
    18361 tcgccaactc gcagcgctgg gccagcgatg gcctgacctg gggcgacagc gtgtgggtgc
    18421 actggcgcga caacgatggc gtggtgctca cctcatgaac gtcgccggcc tgaagcgttg
    18481 gctgccgggg ctgcgtgcca cggtgatcgg cattccgtac ctgtggctgc tgctgttctt
    18541 cgcggtgccg ttcctgatcg tgctgatgat cagcttctcg ctcagccggg tcggctcgcc
    18601 gccgtacacc tggctgctgc agtacgtgga cggcggcttc tcgctgaagc tgaacctgga
    18661 aaactacctg gcgctgttcc gcgattcgat ctatgcgcag gcgttcctga gctcgatcaa
    18721 gatcgcggcc atctccacct tcctcaccct gctgatcggc tacccgatgg cctacgccat
    18781 cgcgcgcctt tcgccggccg cgcgcaacgt ggcgatgatg ctggtggtgc tgccgtcgtg
    18841 gacctcgttc ctgatccgcg tgtacgcgtg gaaggcgatc ctggaccgca acgggctgct
    18901 tgaccagttc ctgcagttca ctggcctgca gacgttgatg accagcctgg gcctgccgaa
    18961 gctgcagctg atcgataccc cgaccgccgc ctacatcggc attgtctact gctacctgcc
    19021 gttcatggtg ctgccgctgt acgccaacct ggtcaagcac gaccaccgcc tgctggaagc
    19081 ggcctacgac ctcggcgcca agccgtggca ggcgttcctg cgcatcaccc tgccgctgtc
    19141 gaaggcgggc atcatcgccg gctgcatgct ggtgatgatt ccggcgatcg gcgaatttgt
    19201 gattccggaa atgctgggtg gctcggagac gctgatggtc ggccgccagc tgtggaacga
    19261 gttcttcaac aaccgcaact ggccgggcgc ctcggcgatg gcggtggcga tgatcctgct
    19321 gttgctggtg ccgatcctgc tgttcaaccg ttcccagcag cgcctgctgg aaggaaagca
    19381 ggcatgagcc cgcgcaccgc caagggcctg gggctgggcg tgctgctgct cggcttcgcc
    19441 ttcctgtacc tgccgatcct gttgctgatg ttctattcgt tcaacagctc acggctggcg
    19501 atggtctggg ccgggttctc cacccgtgcc tacagcgacc tgttcgccga ccgcgcgctg
    19561 atggacgcga tgtggaccag cctggtggtg gcattctgga ccgcctgtac cgccaccgtg
    19621 ctgggcacgc tggcggcgat ggtgatgacc cgcttcaagc gcttccgcgg caagccgctg
    19681 ttcggcgccc tggtcactgc accgctggtg atgccggacg tcatcctcgg tttctcgctg
    19741 atggcgctgc tggcctcgat gggcgcgatt cccggtttcc cggcgcgcgg cctgaccacc
    19801 atctggatcg cgcacgtcac cttcaccctg tgcttcgtca ccgtggtggt gtcctcgcgc
    19861 ctgcaggaaa tggatctctc gctggaagaa gcggcgatgg acctgggtgc cagccggctg
    19921 accgtgttcg gccgcatcac gttgccgatc atcgccccgg cactggtggc aggctggctg
    19981 ctggccttca ccctgtcgct ggatgacgtg gtggtggcca gcttcgtcgc cacgccgggt
    20041 tcgaccacgc tgccgatgaa ggtgttcgcc tcggtgcgca tgggcatcag cccgaagatc
    20101 aatgcactgg caacgctgct ggtgtcggcg gtatcgatcg cggcggtgat cggctggtac
    20161 atcaatgcac gggccgagaa gcggcgccag cgcgacctgc agctggcgcg gcaggacaac
    20221 ggctgaggtc tgccggccgg gccggcaaca acagcgccgg caacatccgg ctcacggccg
    20281 gcggcgcaca atgggggtct tcctcaagga gatcccccat gaccgtcgag atcgtcgatc
    20341 cggccaccgg cctggtcacc taccgccatg aactgatggg cgctgccgat atcgagcagc
    20401 gcctgcaggc tgccgccgag gccttcctgg gctgggcgga tcgctcgttg caggaacggg
    20461 gcgccatcct gcgccagatc gccgcgcagc tgcgcgcacg ccgcgacgac ctgcagcagg
    20521 cgatgaccca tgaaatgggc aagctcaagg ccgaagcgct ggccgaggtc gacaagtgtg
    20581 ccgccgcctg cgagtactac gccgagcacg ccgccgacta cctcaagccg cagctgattg
    20641 ataccgaagc gcagcgcagc tatgtgcgct acgagccgat cggctgcgtg ttcgcggtga
    20701 tgccgtggaa tttcccgatc tggcaggtgt tccgtttcct tgccccggcg ttcatggccg
    20761 gcaacgtggc cctgctcaag cacgccagca acgtgccgca gtgcgccgac ctgatcctgg
    20821 cggtgtgccg tgacggcggc ctgccggacg gcgtgttcga tgtgctgcac atcgacaacg
    20881 accaggccgc cgacgtgctg cgcgacgcgc gggtgaaggc ggtgacattg actggcagcg
    20941 aacgggcagg gcgctcgatc gcgtccaatg ccggcagcca gctgaagaag tcggtgatgg
    21001 aactcggcgg cagtgatgcg ttcgtggtgc tcgacgatgc cgacctcgac aagaccgtgg
    21061 cggcggcagt gaaatcacgc ttcgacaaca gcggccagac ctgcatcgca gccaagcgct
    21121 tcatcgtggt cgatgccgtg gccgatgaat tcacccgtcg cttcgttgag gcggcgggcg
    21181 agcgccagta cggcgatccg gatgagcgtg gtaccacgct ggcgccgatg gcccgcgccg
    21241 acctgcgcga cgaactgcac aagcaggtgc aggccagcgt ggccaagggc gcgcgcgtgc
    21301 tggtcggtgg tgagccgatt gccggcacgc atgccggcta tccggccacg gtgctcgatc
    21361 aggtgggtcc ggggatgccg gcgtacgatg aggaactgtt cgggccagtg gccgcagtga
    21421 tccgggtcaa ggacgaggcc gaggcgctgc gcgtggccaa tgacacccgc tttggcctgg
    21481 gcggcagcgt gtggacccgc gacccggtgc gcggcgaagg ctttgcccag cacatggagt
    21541 gtggcgccgc gttcgtcaac gccatcgtca agagcgacgc gcggttgccg ttcggtggca
    21601 gcaagcagtc tggcttcggc cgcgaactgg ccgaccacgg catccatgag ttcatgaaca
    21661 tcaagaccgt ctacgtggct tgatgcccct gcctttgtag agtcgagcca tgctcgactg
    21721 ctgttggccg catcagtcga gcatggctcg actctacaaa aaggcggatt acagccactt
    21781 ggcgcgcttg aacaaccggt acaaccccac gcacacgccg cccacgccga cgatcatcag
    21841 tgggtaggac cacggttcac tcagctccgg catgtggctg aagttcatgc cgtaccagct
    21901 ggtgatcagt gtcggcgccg ccagcagtgc ggcccatgca ccgaggcgct tgaccgtctc
    21961 gccctgcgcc agcgtcacca gcgacaggtt cacgctcagc gcggtgccca gcatttcgcg
    22021 cagggtgtcg atcacatcgc tgatgcgcac ggcgtggtcg tgcacgtcgc gcacgtacag
    22081 cttcacttcg tcggggatca gatcgccctg gtagcggcgc agctgcgcca gcacgtcctg
    22141 cagtggcgcc accgccatcc gcatcttgtt cagttcgcgc ttgagctcgt acagccgcac
    22201 caccgtgctg cgcttgtagt tgtcagcgaa gatgtccttc tccagcaggt caagggtgtc
    22261 gcggaagcgg tgcacgatcg gcaggtagtt gtcgaccacg aagtcggtca ccgcgtacag
    22321 gcaatacgac gggcccatct tcagcagttg cggctcgcgc tcgacgcgcg cgcgaaccgg
    22381 cgcataggac agcgacgcac catggcgcac cgtcaccagg aagcgcgggc cgaggaaggc
    22441 gtgggtttcg ccatactgga tgcgctcatc gaccatctgt gcggtggtca ccaccacgaa
    22501 cagggaattg ccgtaggtct cgaccttggg ccgctggtgc gcgttgcgcg catcctcgat
    22561 ggccaggtcg tgcaggcaga attcctcctg cagtttcagc agcacatcat cgttgggatc
    22621 gtacaggccc acccagacga agccgttgcc actggcaatg acatcgctga tggcgtccag
    22681 gctgatgtcg tggcgtttgc cctcgtcatc gtagtggacg cagttgatga cgcaggcggg
    22741 gttggccgag gcaggtgcgg aagcggaggc gggcaatgac atgcccgcca tcgtgcgtca
    22801 gggccgtgtt tcggacaagt gaggacgacg ccccagcacc cacgccaggg ccacgtgcac
    22861 cggcagcagc agcacgatcc actgcacgtt gtactgcgcc tgcaggctca gccagtgcag
    22921 taccagcgcg gccacggcct gtaccgccag cagccacagc acgatcctga acatgcggcc
    22981 cggcacgcgc cggcccagca cggcgatcgc gcccggcagc agcagcaccg ccagcggcga
    23041 aagcagcagc aggttacggt tggcccaggc ggcgtagtgg gtgctgaagc cccacaggaa
    23101 caccagcagg ctgccggcga tggtacacag cagccagaac ggcagggcca gcccggccag
    23161 cagccgcggg cggctgcgca gcgccagcac gccggcggcg atcaccaggc cgcacagcag
    23221 ccacggccac cagcggcgcg cgaattcctt cggttccggg tcgatgcggt gcggcaacag
    23281 ttcctgttcg gactgcacca gcggtcgtcc atcgctgttg cgtgcctggc gcagcgcatc
    23341 ggccagacgc atgggtacga acgcttcctg ccagcgcgac agcggctggt cggcgaacgg
    23401 gccgaggccg acgtcgaagc ccagccacat ccacgctgcc ggcgaggcca ggcgcaccga
    23461 ttcactgcga taggtattgc cgcgcgagcg ccccgacagc tgcgattgca ggccgccgcc
    23521 cagcgccttg tccacggtgt cgcgcaccat cgtggcgcag ttggcggtgt agtaatcgta
    23581 gtggtagcgc gcgttttccg gcttggcccg ctcggccagg tcggcggcca gcgctcgcgc
    23641 ctggtccggg cgcaggtcca gccactgcac gctggcgcca cggccggtct cgtcgtaata
    23701 cgacaggtcc tgctgcagcg gcagcgccac caggtaatac atcatgtcgc cgcgcacgaa
    23761 gcggctgatg aaatcatctt cggacggatc gaagtagccg aagttgtacg aggtcgcttc
    23821 gccgctggcc ggatcgatca cgacgatggc gtcgtggccg aagcgctcga agaacaccgt
    23881 gcccggctgc atggtcacta cgccgatgcg cggggcagga gcctcggcgc tggcgacggg
    23941 tacagcaggt gcgggtgtgg ctgccaccgg ctgcgcggag gcggccagcg gcaggaccat
    24001 ggccagcacg cacagtgcca gccacaccgt caggcgcagt gccaggttgg gggcaccgcg
    24061 cttcaagcgt cgtcctgcgc gtccggcggc agcacggtca cgtggaaggc ctgcacccgg
    24121 cgcgcatcgg cgcgggccac gcggaacatg aaacgatcca gcgccagctc gtcaccgact
    24181 tccggcaggt ggcccacggc ctcggtgacc aggccaccga tggtgtcgta gtcctcgtcg
    24241 gagaaggtgg caccaaagcg ctcgttgaag tcaccgatcg gggtcagcgc gtcgaccacg
    24301 tactggccgt cggactggat ggcgatctgc gccgacggat cctcggcctc gtcatgctcg
    24361 tcgtcgatct cgccgacgat ctgctccagc acgtcctcga tggtgaccag gccggcgaca
    24421 ccgccgtact cgtcgaccac gatggccatg tggttgcgcg acaggcggaa ttccttcaac
    24481 agcacgttga gcttcttcgc ttccggaatc agcaccgccg ggcgcagcag ctcgcgcacg
    24541 ttggccgggc cgttgtcggc gaccacgccg cgcagcaggt ccttggccag caggatgccg
    24601 aggatgtcgt ccttgttctc gccgtggacc gggaagcgcg aatggccgga ttcgaccacc
    24661 tgcctcatca gctccaggaa gggcgcttcg accggcagcg agaccatctg cgagcgcgag
    24721 atcatcacat cgcccacggt cagctcggcc accgaaatgg cgccttccat catcttcagg
    24781 gtatcggcgg cgatcagccc ctcttcctgc gcggtgtgca ggaccgcgac cagctcgtcg
    24841 cgggtgtggg gttcgccgga gaaggcggac gtcaggcgtt caagccagcc gcgcttcttt
    24901 tcactgtgct ccgcagggga gctactactg tcgtcttctg acatctctgg aaaaaaggca
    24961 cccggcaggc cgggcgttgg ccccagtcta gcaggatgtg acggcctgtc agtgaccgtc
    25021 gctgccgggc ccggtgatcg gcggcggggc cagttcaggc cgcgcggggg cttcttcctc
    25081 gggcaggtcc aggctgtagg tgcagccggc cagggtcttg ccgggatggg aggccacggt
    25141 ggagacgctg aggatgatcg actcgatctg ggcctcaccg gtcttcgggt cggtcacatc
    25201 acggctgacc agttcgcggc cggcgatgaa cttgccgtcc tggtcgtagc cggtttccag
    25261 ccccagccgc ttggccagcg gccgtgggtc ggcctggtca agcaccgcca tgatgctggc
    25321 gccggccacc gccacccgct cggtggccac gccgaagacg gtgatcggct gggccagccg
    25381 gtactcgctc atgaactggt tgccctgcgg caacggctgc aggcccaggg ccacggcctt
    25441 cagcgggtcg gccagcagcg gcgccagcgc accgagatcg gccacgcgct gccggcactc
    25501 gatcaacgcc ggcaggtcca ggctggaggc gaaggcaggc ggagcggcaa gggcacccag
    25561 caggatcagg cagcagcgca gtgacacggg cggtatccgc aggcggtggg gcgccatcat
    25621 agccccgagg aacgggtgaa cggccgggtg atacggcggg cgactccgat catcactgca
    25681 cgcaggaaca tcagcggcag ggtgatcagc accgacagca tcgcgaggtg gaccagcccc
    25741 gcgatggccc aggccacggt cggcaccagc ccagcgtcca tcatccaggg catcgggttc
    25801 ggcccggcat tccggatcag catcatgtag accgcggcga gtacgtacag caccagcagc
    25861 gaggtgcgcg aggcatggaa gaacggcagc ccattggcgg gccggcccag gcgccgttgc
    25921 agcatcatcc gccacagcac cggcagcgcc agcgcacccg ccagcatcag cagcatcgag
    25981 atcgtcagca ggccggggcc gtgtgcgggc tgcgcccggt cgttgaggta cggcccgatc
    26041 atgccgatcg ccagccctgc caccaggcag aggggcgaca gcagcgccag gccgcgcagc
    26101 agccagtgct gcccggtggg atcggtggca gcgatgcgcc ggacggtgcg cacgcccagc
    26161 accagcaggg cggcgaagag gccgcccacg atcagtagcg tgatgaagct gccttgctgg
    26221 atcatccttg ttcctcgtgt tttcgttgtg gacccggggg atggccgccc ggcctgctca
    26281 gcgctcgccg gcgtacggat cggcgatgcc gagctcggcc aggatctcgc gctccagctg
    26341 ttccatcgcc tcggcttcct tgtcgtcctc gtggtcccag ccgagcaggt gcagcacgcc
    26401 gtgcacggtc aggtgcgcgt agtgggcatt gagcgccttg ccctgttcat cggcttcgcg
    26461 ggccactacc ggcgcgcaga tcaccaggtc gccgagcaac gggaacttga cgcccttggg
    26521 caggccttcg ggcatttcgg ccgggaagct gagcacgttg gtggcgtagt ccttgccgcg
    26581 gtagtggcgg ttcagtgatt gcccctcctt ggcgtcgacc acgcggatgg ccaggtcggc
    26641 ctcgcggatg cggcccttca gtgcggcggc cacccacttg cggaagctga ccgccgccgg
    26701 caggccggag cgcggcaggg cgtaactgac ggcgacatcc agtcgcacgg gaccacgggt
    26761 catggagttg ctccaggctg gatctgatgc aggtcgcggc ggtcgtaggc gctgacgatg
    26821 cgcgcgacca gcgggtggcg gaccacgtcg cgggattcga agaaggtgaa gctgacgccc
    26881 tcgacccccc gcagcacatc gatggcgtca cgcaggccgg agcgcacgtg cttgggcagg
    26941 tcggtctggg tcaggtcgcc ggtcaccacc gcggtggaac cgaagcccag gcgggtcagg
    27001 aacatcttca tctgctcgat ggtggtgttc tgtgcttcgt ccaggatcac gaacgcatcg
    27061 ttgagcgtgc ggccgcgcat ataggccagc ggcgcgatct cgatgacgtt cttctccagc
    27121 agcttgacca ccttctccac gcccatcatt tcatacaggg cgtcgtacag cggtcgcagg
    27181 tagggatcga ccttctggct caggtcgccg ggcaggaagc ccagcttctc tccggcctcc
    27241 accgccgggc gcaccaggat cagccgctgc acgcgcgatt cattcagcgc ttcgaccgcg
    27301 ctggccacgg ccaggaaggt cttgccggta ccggccgggc cgatgccgaa gttgatgtcg
    27361 tgggtggcga tctggtgcag gtagcggccc tggttcgcac cgcgtccgcg caccgtgccg
    27421 cgcttgacct tgattgccac gtcctgcgct tcgtaggagc gctcggcgat ctgctcgacg
    27481 ttggcctggg ccaggcggag atggatggca tggttgtcga aggtggtctc gccggcctcg
    27541 gcgtacagcg cctcgaccag cttctgtgct tcgacgatgg cctcttccgg tccgctgatg
    27601 cggaacacga agccgcggtt ggcgatctcc acgccgagct tcagctcgat ctgtcgcaga
    27661 tgcccgtcaa acggaccgca taggttggcc agccgctcgt tgtcttccgg cgacagggtg
    27721 aagtctcgat gctcgatgct tttcattgat cgggtagggc ggaagccttg caccacagtg
    27781 gattcaggcg gcaagggtag cgcgcggcag ggtcacacgg ccagcgccgg gcgttttcca
    27841 catggcgtgt ggaccgggct ggaagaaagc tgtggataga caccttcgtc ccttgtgcca
    27901 caggctccat gagccgatgg tgaaaaaaac gtcatgaccg gcggaggggg gagtgccgga
    27961 aacttgacgg cggccgggcc gcggatgact atctgcccgg agccccaagg gaacagggtc
    28021 ttccgcaagg atcggcgcag cgcgctgccc ggcccgtagc aacgcggaag tggcaggtag
    28081 gccatcgcca gggcaggagc gcctggcaca ggaaatgaca tggatgcttc actcgcgcat
    28141 gccgcgcttg cttcgctggt cgggctggag ccggaccatc aactgcaccg cctgcgggcc
    28201 gatggcctgc ccccattgtt cgtcgaacaa tggtggggcc atgaatgcct ggccggtgga
    28261 ttcgattact gggtggatgt gctgcatccg gacgcgggcc tcgcgttcgg tgaatggccg
    28321 ggtcgcgagg cggcgctggt cacccgcctg gacgatggcc aggatcatct gcgctgcggg
    28381 tatgttgccg ctgcccatcg gctggacagt gagggcggcc tggcgcgcta tcgcctgcac
    28441 tgtgtcccat ggacctggct gctggggcat gcgcggcaca gccgcgtgta ccaggagcgc
    28501 accgtgcgcg acatcgtcga ggacgtgctg ggcgggcatg gcgagttggc ctgctggcgt
    28561 tggagcgagg acgccgtagc cgctctggcc gaggcgcctg cgcgcagcta ctgcgtgcag
    28621 tatcgcgagc cggacctggc cttcgtgcag cgcctgctgg ccgaagaggg aattgccggc
    28681 gcattcgaga gcgacagcgg cgggcggctg accctcgtgc tgttttccga cagtcgagcg
    28741 cagccggaga accctcagtc cgcccgcgat ggcggcatcc gcttccatcg caatgacggt
    28801 accgaagtgg cggacacgct gcagcagctg ggcgcacgtc gcctgctggg cagcaaccgg
    28861 ttgtcgctgg tcaccagcga ttaccggggg ccggtgctcc gccatgtcca gttgccgttg
    28921 caggcgggcg gccagagtcc gcgcgagatc tacgacccgg tgggcgcgca tgccttcgcc
    28981 caggcggccg atgggcagcg ccgggcgcgc cgggtagccg aagcgcacga ggcgggcctg
    29041 gccggctggc tgggcaccgg cagcgttcga agcctgcagg cgggccgctt catccgcgtg
    29101 ctggcggccg gaaccgccgc cgccccgacc ctccttccaa ctgaagtact gcaccacggg
    29161 tgcaacccgc cgccgatcac gcaggggcgc gggcagcggc gggccgagcc acctgcgccc
    29221 tggctcgcgg ccagcgcagc gctgccggga gccccgctcg aggcgtcctc ggcgttgggc
    29281 tacgccaacc ggttccgggc cgtcgaccag cggcagccat ggcgcccggt actgcaggac
    29341 ggaacggggg agcgcatcaa cccgcggccg cttgcaccgg gctaccagac cgcccgggtc
    29401 atcgccggcg atggccggag tgacgccgat ctgcatgccg acagccaggg ccgggtccgg
    29461 gtgcgcctgc atctgcaggg ggccaccgac gccgaggcaa cgtgctggat gcgggtggcg
    29521 cagcgctacg ccgggccagg tgtgggttcg cagttcctgc cgcgtgtagg ccaggaggtg
    29581 ctggtcggct tccttgaggg cgacatcgac cggccgctgg tgctgggtgc gctgtacaac
    29641 ggccgtggtg atgccggcgc tgctcccacg cctgccggtg cggccgcagc cggtagcgac
    29701 gcaggcctgt tcggccaggc cgccgacagg cgtccgagtg cgcagggcaa tgcggccggc
    29761 ggccacgccc ctgcctggca tgcgatggcg cccggtgaag gccagcaccg gcatgccggt
    29821 gccttgtggg gcatccagtc acgggagtgg tccggtaccg gctacaaccg cctggtattc
    29881 gacgactccg atgcgcagct gcgcctgcag ctggccagca gccatgccat cagcgaactg
    29941 aatcttggcc acctgcggca ccaggccgac aaccatcgcg ggtccctgcg cggcgagggc
    30001 gcggaactgc gtaccgatgc ctggggtgca ctgcgcgccg agcgtggcgc atggctgatc
    30061 gcgcaccccc gcgcgcccgc ttcgccggcc ggtgaggccg ttgccgccag tgcgctgctg
    30121 cagcaggcgt caaccctggc cgggtcctgg cacgcgatgg cgaccaccca ccgggcggtc
    30181 ggcatggcca gccacgctcc gccggacgac agcgcgggcc tggcaggcct gcagcgggtc
    30241 gcgcgcgcca gcgtgcccgg gcaggactac gcacaggccc gcgcaggtgg tgagggtcgg
    30301 cccaccggcg gcgccgtgcc gcataccgaa gagcccatgc tcgggctgca cggccatgcc
    30361 ggcctggcca tggtggccgg gcaggcgctg cagtggagca gtgcccggca tgtggtgctg
    30421 gccagtggcc agcacagcga tgccagcgtg gccggtagcg cgcgcctgca cgcgatgcag
    30481 gccgtgggcg tgctcgcagc cagtggccgg acctttgtcg gcgaggctgc attgagcgtc
    30541 gtggcggggc aggcggcgct ggacgtccgc gcccagtccg cgcagatcaa cgtgcaatcg
    30601 cgtgcctctc tgcgtgccgc cagcgcccag gcggccgtgg aactggccgc gccgcgcacc
    30661 ctgcatatcg ccaccgccgg tggcgccagc ctcaccctgg agggcggcaa cctggtggtg
    30721 aactgtcccg gcaccatcac cgtgcacgcc gggcagaaat ccttcgtcgg gcctgcgcag
    30781 ctcagctacg cgctcccgga catgccgacc agcaccctca gcgagcagat tccgaagctg
    30841 gccttccgcc tgcaggacat tccggggccg caggggcatc cgctggcagg ccagccctgg
    30901 aagatcgtgc gtacccgccg ggcgctggac gaggacatgc gagatggcgc gctggtaccg
    30961 ggcaactggg ccgagaccgt tgccgagggg caggccgacg agcagggcga cgtcagcctg
    31021 gatgacgccc tgtgcgcgaa gatctggaac gatgccggcc ggttcccggg gcggctgttc
    31081 ctggtgcatg gcatcgacgt gattcccctg cagcgtccgc gcccctacag cagctcgcca
    31141 ggcgtgcgcg ccaccatgga cacgcttgaa gcgatcaact acggcaaaac cctggccgac
    31201 cttcccgatg atgcggcgct gtatgcctac cggcagcgtg ccgagtacga gttccagtcg
    31261 catatcgacg ccgacccggc ccagcgcaag gagatccagt gatggcagac ggcaccaagc
    31321 tgggcagcgt cccgcatacc gcattgacct gcctggacgg gcagaagggc accagcagcg
    31381 gtgactacta cgcgccaccg gaccgccagt tcgcgccggt gcggcgcggc aacaaggtcg
    31441 acgcctacac cgatggccgc tcggcgatga aggcgatggc cgatgccatc cgcggcgcgc
    31501 agaagttcat cttcatcgcc gactggcaga tgaacttcga caccgagctg gacagccgcg
    31561 gcggtgccca cgccagccgc ctgagtgaac tgctgttcga tgccatcaac cagcgcggcg
    31621 tggacgtgcg ggtgctgctc tacgacagtg tcgaggcggc ggcctacacc cacgaaaacg
    31681 aggcgcgtac ggccctgtac aagatgcagg atgccaatac gccggggcag gtgcaggtcg
    31741 gcctgcacaa cccggccacc ggccgcaccg atgccttcaa catcgccttt tcgcaccacc
    31801 agaagatcct ggtggtggac gggaagatcg gcttcgtcgg cggcctggac atcgcccacg
    31861 ggcgctggga cgacggcaac ttcgacgtgg tctgcgaccc gacgctgcat gtgctcaatg
    31921 accactacaa caactgcctg agcaagtttc ggggcatgac gagggctgag caggagctga
    31981 cgctggacaa gcccgatacc agcccggacg cggtcggccg tgtccgcccc ggctttgccc
    32041 aggcatacgt gccgggcctg gccatcgcgc tggaccggat gaaggcgcag tgggatgccg
    32101 gcgccgcgct ggccgaactg caggactatg cggacaagct gggcgtgccc gacgcgctgg
    32161 agcgcgaagg catccgcaag cttgccgaga tggtcattcc gggcatggaa gaagcggtga
    32221 aggtacagcg ttcggtcgcc aagaccttcc tggccattca agggtggttg accgagatcg
    32281 aaaaggaata cgccgacgtc atcgccgctt ccaaccgggc cgccgacgag gcggtcaagc
    32341 tgaacgtcgg cgaggctgcc gccgccgcgg ggcgcgcggt ggaaggcttc acgaagatcc
    32401 aggcgaagaa gttcggcgaa tgggtcgatg agcgcaagat cgcgatcaag gacgccattc
    32461 tgggcccgat caagacggcc accacggtcg tgggatacgt acgtgatcct gactcgctgg
    32521 tcacggacgc caaggccaaa tatgccgaga tcgagaacaa gttcaacaag gccaaacagg
    32581 cgtgggaatc gctggtgaag tggatcaacg agccggtgga tcgcatccag cgcctgctcg
    32641 acagcggccg ccagccgcgc atgccgtggc aggacgtgca cgcgcgcctg cagggaccgg
    32701 cggtgttcga catctgccgc aacttcatgc accgctggaa cgccatggtc tggcagaacc
    32761 agcgcggcga ccgtgaaatc ggcacggcgg tgcgaaaggt cctgaaccgt ggcatccgcg
    32821 gtgccaacga ctggacaggc gccggcctgc cggagcagac cacgctggca cgtggcatgg
    32881 aactgacgcc gttgagcgat caatggctgc agtcgatggg cggcatgcag gcgttgttcg
    32941 gtgacctggc ccggccgggc acggccggcg acgtcaccgt acagatcgtg cgttcctcgg
    33001 gtacggcatt gcatgcgctg gagaagaagg gctgcaagga actcggcctg aatctggacg
    33061 atgccagttg cctgcagccg tactgggagc gtaaccagcc gatgcattcg atcctcgatg
    33121 cgatggtcaa ctgcatcgcc tcggcgcgcg cttttgtcta cctcgagacc cagttcctga
    33181 tttccgaatg cggatggtcc gacgctgaag ccggcaggac ggtggagacg gcaatcaagg
    33241 gcggcgagcg gcggcccatg accaaagccg aaaaaaagaa ggccggctac gtcgacaagg
    33301 gcgtggccat gagtgggccc atcgggaaaa ccggcgttgt gcaggacctg gtgaagcgca
    33361 agcagggcgt gaagtcggcg gccagcaacc cgctggtggc ggccatcgcc gcgcgcatcc
    33421 gtcgcgccat cgtggccgga cagggcttcc atgtgtacat caccttgccc gtgcatccgg
    33481 aaggcagcct gttcgacggt gccgtgctga agcagcagta ctgggtgcag cagaccctgt
    33541 tgcgtggcga cgacagcctg atccgccgca tctgccgttc actgatcgcg cgcgacaagg
    33601 acatccgcga agtaagcgtg gaagaggccg acctgcaggc agaggtgaag gccgggcgct
    33661 ggaaggaata cctgtcggta atgaacctga gaagttatgg ggtcctggcc gacatcaacc
    33721 acaagaacca ctacgcaccg catacgatcg gcgcggatca ggccaccccc ttgtacgtgg
    33781 tgaccgagca gtgttacgta cactccaagc tgctgatcgt ggacgacgcc gtggccatca
    33841 ttggaagtgc gaactgcaac gaccgcagcc tgctgggcac aggtgacacc gagatcgccg
    33901 cagtgatcgt ggacggtgcg gccaagtcga ttgacctggg caatggcgtg caggtgataa
    33961 cccggaagtt tgcgcgggat ctgcggatga agctttggag gaagttcctg ggggaggaaa
    34021 tcgcagtcaa tgacggaaag gagcgagggt atgctgagtc gaatgccacc agcccctact
    34081 atccgccatt tcaaaagcga cccaggagtg ctttcgtaga gcttccagtc gcgtcatcca
    34141 cctggcggga aattggaaag atagctgacc ttaacttggc cacttatcat cgagtgtttt
    34201 ccaacattcc tggtgattcc atggcgcgct atgattcagt attccagtgt tttcccgctg
    34261 ctgggttcaa tgaaaaaggg catcaattgc gaatgttgca cgcccagccg ccggatctgc
    34321 agccggaatt catgatcgag ccaagtcaat tggcggacgg ggcaaccgtc agcgtcggac
    34381 gtcacgatgt tgcgaaagcg atgagtttta tgaaggatca gaagaatctt catggattct
    34441 gggtttccat gccgctcttg tgggggcatg gtatggatga tcctgccgcg gcaatgccga
    34501 atcagataat tgcagctgca ccagcgttgg ggtcgagtga agtgctcttg gcgctcaatg
    34561 ataaaaagtc gtcatcggta agcggggcac attcatgaaa tttggttgga tcacgatgct
    34621 gttttgcttt ccgattgtgg ccggggcgag cggcgcgggc attgagccat ggggggaggt
    34681 gccaaagaat gtacaagttc ggttctctcc cgattcgcgc ggtgttgtca gggtctccgg
    34741 agacaggccg acaattcttg ctcccaacgt ggctattagg ttgacctccc ctgatgaaat
    34801 cgagaacaag ccgtttgatc gagatggagg agctgttgtg tatcttgagc ctaatagcgg
    34861 aagtggactt cgtgtagtcc gcgaagagaa atgggttcga agagaggccg tttttcgaaa
    34921 ggtgcccgct gatattccgg aggcagttgg aagggtctat ccatacttca aggttgaaag
    34981 ctcaaggcgt ttcatctacg acgatcaagg gcggatagag tcggtgattc ttgatgattc
    35041 aggtggcaga tcccaagtcc agttctgtgc gctttatgac gccgcaggaa gggtcgcggt
    35101 tgccacttcg acagataaca atccggtgtc gtttgatcac gactttaact gtgaaactct
    35161 gcggggcact ccttcgctga gtatgacgga atatttccaa tacggaaatt acggggcgtt
    35221 gaagaggaaa ctttcaaaat cgctggtgca gcctggacag tcgcaggagt ccggcgccgg
    35281 ggcggaggat cgggccgttg aagacggatc ctggcgaggg tacggggagc tgtactacgt
    35341 taatggttcg aatggcgtgg ggtatgattc gttggttttc gggatgagtg atgcgcgcgg
    35401 gattgagtat tttgagacca cgaatttcag tgtcgcctcg tccgacgtga cgcctgtatt
    35461 cgcgcatcgc agccaggagg catcgcataa gttgcgctat accttcactg gtgagcgtgt
    35521 gccacccgat ctcgctaagg gtctccttga gggggttgta gggtatgctc gtgtccgcca
    35581 gtattaccac agcaccggtc agcgtgtttt cgaagttttc gctcctggcg caaagtaccc
    35641 ccgtgaacgt cagtggcgca cgctggatct gaatcgtcag gaaaactacg acgcaaaggg
    35701 caagctcacg cgcgtgatcc tgtccggccc tgtctctggt gacgcctaca ccgagaacct
    35761 gcgcgcctac gcagacaagg gcgtattgaa gctcacgccc ctcaccagcg gttacagctc
    35821 ttaccgcgtg tacgactatg acgctgccgg tagagagact ctgtcgttcg tgtgctggcg
    35881 ctacgaagtc tcgaccaaca agccttacgc ccatttcccc tggtgggagc ccgatcctcg
    35941 gcccaagcgc agtcgtgaag ccgaactgca gtacggcagg acgcaggtcg gtacacgctg
    36001 cggcacgccg gacggcaaga tgagcgtgga gggaatgggc ccggtgaaga agctgatgga
    36061 aaccaagtac gggtttggga cgaccaagct gggattgccg ggcgagtagg gcgagacttc
    36121 tttcccgaac ttgtgacagg cgtcggcctg ccggagtaga ccacgctggc gcgtggcacg
    36181 gaactgacgc cgttgagcga tccgctggtg gcggccatcg ccgcgcgcat ccgtcgcgcc
    36241 atcgtggccg gacagggctt ccatgtgtac atcaccttgc ccgtgcatcc ggaaggcagc
    36301 ctgttcgacg gtgccgtgct gaagcagcag tactgggtgc agcagaccct gttgcgtggc
    36361 gacgacagcc tgatccgccg catctgccgt tcactgatcg cgcgcgacaa ggacatccgc
    36421 gaggcgagcg tggaagaggc cgacctgcag gcagaggtga aggccgggcg ctggaaggaa
    36481 tatctgtcgg taatgaacct gagaagttat ggggtcctgg ccgacatcaa ccacaagaac
    36541 cactacacac cgcatacgat cggcgcggat caggccaccc ccttgtacgt ggtgaccgag
    36601 cagtgttacg tacactccaa gctgctgatc gtggacgacg ctgtggccat cattggaagt
    36661 gcgaactgca acgaccgcag cctgctgggc acgggtgaca ccgagatagc cgcagtgatc
    36721 gtggatggtg cggccaagtc gatggacctg ggcaatggcg tgcaggtgat aacccggaag
    36781 tttgcgcggg atctgcggat gaaactttgg aggaagttcc tggggcaggc gcttgagacg
    36841 aagcctgaga agggggggca attcgtcttt tctaatgcaa ccgaagacta ctacccttgg
    36901 ttcagcgaaa aagttccaac cctggaggtc gacaaaccgg caagtgccag aacttggatg
    36961 ggaatcaggc agcttgcgga tgccaattcc gaagcttatc agcgtgtttt cacgaatgtc
    37021 ccgcgcgact ctttccctcg ctacgactct gtgtttcatg gatttccggc ggcaggtctt
    37081 agtgacaaag ggcacgtcag gcgcatgctc tacgcgcagc cggcagatct gcagtcagat
    37141 ttcatgaagg agccaagtgt tgtgaacgac tacgtgaccg atgcagtggg gcggcatgat
    37201 gtgcgtaagg cgacggattt tctcagaggt accgcaacgc gccgcgggat tcagggtttc
    37261 tgggtgacca tgccactcct ctgggggagt gacatggacg atccggctgc cgcgatgccg
    37321 agcgagatca ttgcagccct gcctgttcag gggaataggt caagtgaatt ggcatgctcg
    37381 actcgacatg ctgccttgag tcaaggagaa aaggtgtgag tgagtatttg ctgctgaaag
    37441 cactgattgc ggtgagtgct ctgtgcgccg tgcaagccgc gcatgcaggt tgcagttcaa
    37501 aaaatgaagg ggatggccgc tttcagggac acagcatggt ggtcaagttt acgccaagct
    37561 tggatggtgg aggagatgca gtaggcgcca gcctcagtcg cgcgaacgag gtggcacctt
    37621 acataagaat caggaccggt cctgatctgg ctaagttgaa caacgttcca ttcgactcga
    37681 atggtggttc ggtctactat ctggaaacta ctggccaagg gcagcggatc tgccgtgctg
    37741 aggaatggag aaggcgggag tccaagctga ttggtgaagc gcctccccga agcctgcatc
    37801 ctgcagtcaa gttgctgtat ccgtactttg aactgcataa ggcgcacgag cttgattacg
    37861 atacgtcggg tcaattgaca tcgattcaac agaccggcac gtcgggccgt aaggtcacaa
    37921 cgttctgtgc gctctatgac gaaaatggtc gcgtagaggt ggcaaatgag atttcaggtg
    37981 tcagcgtatc ggatgatgca gactttacat gcccccagct tcgcgtgaag gcgtccaaaa
    38041 gtaatgcttg gtacttcacc tatcggccgg acgggtcgct ggcctctgat ttgaccaaga
    38101 aagccacgcg taaggcaggt gaggatccct atcgcgagga catcggtatt ggaacagagg
    38161 cgaccgatgg cgcgtggtac gcgagcggaa gtatttatat cggagatgcc aatcagcgca
    38221 cgcggatcgg tagcatgttt catggtagcg agaaaggagg aattagtgga attgaagact
    38281 actcattcgt tatcgctccc gccgatgcga cagctctttt cgctgagcgc agtcaggacg
    38341 gtcaacagaa gttggtctac agattccccg gcgagcgcgt gccaatggaa gttgcaacgg
    38401 ggctgtttga gggcataacc gattacaccc gcgtgcgcga gtaccgccac cggtcccaca
    38461 gccggatttt cgaaattttc tccccaggtg ccaagcaccc tcgcgaacgc cagtggcgca
    38521 cgctggatct gaatcgtcag gaaaactacg acgcaaaggg caagctcacg cgcgtgatcc
    38581 tgtccggccc tgtctctggt gacgcctaca ccgagaacct gcgcgcctac gcagacaagg
    38641 gcgtattgaa gctcacgccc ctcaccagcg gttacagctc ttaccgcgtg tacgactatg
    38701 acgctgccgg tagagagacc ctgtcgttcg tgtgctggcg ctacgaagtc tcgaccaaca
    38761 agccctacgc ccatttcccc tggtgggagc ccgatcctcg gcccaagcgc agtcgtgaag
    38821 ccgaactgca gtacggcagg acgcaggtcg gtacacgctg cggcacgccc gacggcaaga
    38881 tgagcgtgga gggaatgggc ccggtgaaga agctgatgga aaccaagtat ggctttggta
    38941 ccacgaagct tgggttccca ggcgaagaga aggattgacc gctcctgtcg ccatgcggtc
    39001 catcctgccg cgggcgcacg ttccattgcc aggcgagcaa tccgcccatc cccctggcgc
    39061 ttttccacac cggctgtgga atgatgccga atcaacctgt ggataggtgg gccagaccct
    39121 gacggcacaa ggcctgccac ggtgcggtga aaaaaccgcc agggcggatc ggcatcatcg
    39181 cgggtgcacg gggctgatgg caccttagcg ccgtcgctgg aggggatagt catgggcaac
    39241 ggcatgcgtg ggttcggact ggtgggcctc gccctgctgg caggctgtgg ccaggcgccg
    39301 ccgactgcac tgggaacgct ggaatgggac cggatcaccg tgccggcacc ggcggccgaa
    39361 gtgattgcag cggtggaggt gcgcgaaggc cagcaggtca aggccggcac cgtgctgatg
    39421 cagctggacc cggcccgcgg tgacgcccag ttcgccgccg cacaggccga caccgcgcgc
    39481 gcgcaggcgc agctggaaga actgaagatc ggcccacggc aggagcagat cgcgcaggcc
    39541 caggcacagc tggccgcgct acgcgcggag tcggtggaag ccagtgccta ctaccggcgc
    39601 gtgcagcccc tggcacgcca gcgcctgatc gccgccgccg agctggaccg cgcacgggcc
    39661 gccgccggca acgctgaagc cagcgtgctt gccgccgagc aggcctggct ggagctggtg
    39721 cacggcagcc gcgcgcagga tatcgcgcag ggccaggcgg cggcggacgc tgcgcaggcg
    39781 cagcaggtgg tgcagggcgt caacctgcag aagctgcagc tgcgcgcccc ccgcgatggc
    39841 gtggtcgacg ccttgcccta tcggcagggc gaccaggcgc cgatcggcgc accactggcg
    39901 gtgatgctgg tcggcgagcg cccctatgcg cgcgtctacc tgccacagcc actacggttg
    39961 caggtcaagg tcgggcaggc cgcgcaggtg catctggaag ggcaagccgc tgcgttgaaa
    40021 gggcatgtgc gctcgatccg cagcgagcct tcatttacgc cgtactacgc gttgaccggc
    40081 gacgacgtgg cgcggctgag ctacctggcc gagatcgaag tggacgaggc gaccgacatg
    40141 cagaaactgc cggccggatt gccggtgcgg gtgagcttct gaacaccggc gacgacattg
    40201 ccgtgcatgc gcagggcctg acccggcgct tcggcgatct gctggccgtg gacaacgtcg
    40261 acctgaccgt gcctcgcggc caggtctacg gcttcctcgg cccgaacggc tcgggcaagt
    40321 cgaccacgat ccgcatgctg tgcggcctgc tggagccgag cgcggggcag atcgaggtgc
    40381 tgggcctgtc ggtgccggaa caggccgagg cgctgcgccg ccgcatcggc tacatgaccc
    40441 agcgcttttc gctgtacgaa gacctgtcgg tgcgtgagaa cctggagttc cttgccgcca
    40501 tccaggacct gccgcgcgcg caggccgggc agcgcgtcga tgcgctgctg cagcagtatc
    40561 ggctgcagga ccggcagccg cagttggccg gcacgctcag cggcgggcag aagcagcgcc
    40621 tggccctggc cggtgccgtg gtgcacgcgc ccgaactgct gttcctggac gagccgacca
    40681 gcgcggtcga cccggaatcg cgccgcgatt tctgggaggc cttgttcgaa ctggccgacg
    40741 ccggtaccac cgtgctggtg tcgacccact acatggacga ggccgagcgc tgccaccgtc
    40801 tggcgatcct ggatcgcggc gcgctggtgg ccgatggcac gccggccgaa ctgtgcgcgc
    40861 ggttgcaggg gcgcacgctg caggtcacct cttcgcagcc acgccaggcc agccgcgcgc
    40921 tggccgacct gcccggcgtt ctgagcgtgg cgcagatcgg cacgcagctg cgcgtactgt
    40981 gcagtgaaga cgcggccgac atggcggcgc tgcagcgcgc cttggccggt gccgatccac
    41041 aggcgcatat cgaggcggtc gcgccgaacc tggaagacgt gttcgtcgcc gccacccgag
    41101 gtcgtggccg ggagccggcg gcatgaacct gcgccggctg tgggcgatca tgctcaagga
    41161 gctgcgccag ctgcgccgcg accgcatcac gctggcgatg atcgtcggca ttccggtgat
    41221 gcagctgctg ctgttcggct atgcgatcaa cctcaacctg cgccatcttg atgcgggtgt
    41281 ggccgaccag gcgaacagcg cggcctcgcg cgcgctggtg caggacatgg tcgccaccgg
    41341 tgtgatcacc ccgcgcagcg aagcctacag cccggatcag ctgatgcagg cgctgcgccg
    41401 cggcgagatc agcgtcggca tcgtggtacc ggccgatttc gagcgccgtc gtttcgatgg
    41461 gcgcgaagcg gtgcaggtgc tggtcgatgg cagcgatacc gtggtgcaga gtgcggcgat
    41521 ccagctggcg caggtgccgc tcgacacgcg cccgaccagc aacacgcggc cgctgcgcga
    41581 aggcagcatt gccagcggcc aggtcagcgt gaccagcttc tacaacccgc agcgaagatc
    41641 agcggtgaac atcgtgccgg ggctgatcgg ggtgatcctg accatgaccc tggtgatgtt
    41701 cacggcggtg gcggtggtgc gcgaacgcga gcgcggcaac atggagctgc tgatcgccac
    41761 gccggtatcg cgcagcgaac tgatggtggg caaggtgctg ccctatgcgg ccatcggcct
    41821 gctgcagacc acgctggtgc tggtgctggg cacctggctg ttccaggtgc cgatccgcgg
    41881 cagcctgctg gacatctacc tggccgcggt gctgctggtg ctggccaacc tggcgctggg
    41941 cctgttgatc tccacgcgcg cgcgctcgca gttccaggcg atgcagatga cgctgttcct
    42001 gttcctgccg tcgatcctgc tgtccggctt catgttcccg ttcgccggca tgccacggcc
    42061 ggtgcagtgg ctggccgaag tgctgccgct gacccacttc ctgcgcctgg tgcgcggcat
    42121 catgctgcgc ggtgcgtcgc tgtgggagct gtggcacgac gcgctggcgc tgctggcctt
    42181 catcgtggtg atgatgacgc tggcgatcct gcgcttccgc aagcgcctgg attgaagcat
    42241 gc
//
LOCUS       DAOKIP010000015        41259 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.015,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000015 DAOKIP010000000
VERSION     DAOKIP010000015.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 41259)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 41259)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..41259
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.015"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..2638)
                     /locus_tag="QEL58_000723"
     CDS             complement(<1..2638)
                     /locus_tag="QEL58_000723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012512057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS-domain containing protein"
                     /protein_id="HDS1675236.1"
                     /translation="MYWLSRHRMLLLTILVMVGGTVLCAVAAGHYAWRRALGEESSQV
                     QRQLQLYGQGLQQRIDRFGTLPQVLALDPDLLHALRVPPSPAERQRLNLKLQRANEVT
                     RASTLTLVGHDGVAVAASNWDQPTTNVGENYSYRPYYRQALAQGRGRFYGIGMTTGVP
                     GYYLSQAIEEDGKRLGVVVIKVELSALEQEWLSSPDVVLASDDHDVVFLANRDNWRYR
                     LLRPLGADERREMLDARQYADRALQPLRARTEDVLADGGRMVRLLDPALVQPMLWQSL
                     ALPAEGWNLHLLHDASAATAAGRAAALTGGAAWLALGFLVLFVQQRRRLAKHRLRSRR
                     ELETLLKQHAQELRTAQDGLLQAATDADSGLSRSLEHLPQGVVVIDRELRLVAWNSRY
                     LELFRFPLDLVRVGRPIEELFRFNARRGLLGPGPVDEAIERRLNHLRSGRPHMRESEK
                     DDGTVLEIRGNPLPDGGFVTSYADITSYKNAARELRSLADALEHRIAERTHDLDEARR
                     EAEQANRYKTRFVASAVHDLLQPLNAARMFVSVLRGKLSDPAQQQTSDHIDAALAAQD
                     AILNSLLDIARLESGSLPTRVQAFRLGPLLQTLAREFGIAAQSRGLVVDWIDTDAVVV
                     SDEALLRRILQNFLSNALRYSERGRVLLGCRRRDGLLWIEVHDQGPGIPDALQGEIFE
                     EFRRLHDGQQRGAGLGLAIVDRIGRLLGHPIRLRSQVGQGSVFAVGVPFGDASAIPTT
                     APAPVLVQEPAADNPLRGRRVWVIDDDPHVCAASRALLERWGCEVVLADGPQAALQLA
                     SATTVPELVLLDVRMGDHHGPVLYETLAELWLARPPVVLVTAERDAGLREMAAERGWG
                     MMAKPVKPPALRALMSQLLIRHR"
     gene            complement(2705..3871)
                     /locus_tag="QEL58_000724"
     CDS             complement(2705..3871)
                     /locus_tag="QEL58_000724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007964505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin"
                     /protein_id="HDS1675237.1"
                     /translation="MRPIPTLLALSLAALPAFASAADFDNWPTKYTFNDGTELAATAN
                     IAYDYNDFSSASGLEDDDAVRRKEFGATLKKKGVYDAMVYYDFQADTWLDVFVRFESK
                     AFFGRDVGRFRFGYMKTPVGLDANTSSRAGSFLETALPVQAFYAGRRTGVEWVLERPQ
                     YLLQAGAYGGKDLQGDNPGTTQAVRAVWTPVKAPGDVIHLGVAYSQENPRGYSDGRDV
                     HHEASARLRARPEAGLTDIRYVDSGALVTADQIRRTGLEGIWIRGPFSLQAEALQATV
                     TRKGLPDYTGSGQYAMASWVLTGESRPYNAGAVANIKPAHNYGAVELVARYSRLDLDD
                     GSILGGRQHDLTLGANWYLTSHFKFQANYVKVDASRRGVHSTPEIFELRAQMHF"
     gene            4205..5548
                     /locus_tag="QEL58_000725"
     CDS             4205..5548
                     /locus_tag="QEL58_000725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006391248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dicarboxylate/amino acid:cation symporter"
                     /protein_id="HDS1675238.1"
                     /translation="MHIPTAAPAPAKPLPIYRQLYFQVIVAIVLGAILGHYEPLIGEK
                     MKPLGDAFINLVKMIIAPVIFLTIVTGIASMTHLRTVGRVFAKAMAYFLFFSTLALIV
                     GMIVAHVVQPGAGMNINPAELDQTAVHSYVEKSHDLTLVGFLMDIIPKTLLSAFVDGN
                     ILQVLFVAVLFGIALAMVGEKGKPVLNFLEALVAPVFKLVHILMKAAPIGAFGAIAFT
                     IGKYGVGSLINLAWLVGSFYLTAFLFVAVILGLVCRLCGFSVFKLARYLKAELLLVLG
                     TSSSESALPSLMEKMERAGCSKSVVGLVVPTGYSFNLDGTNIYMTLAALFIAQATNTE
                     LTLGHQIALLLVAMLSSKGAAGVTGAGFITLAATLAVVPEVPVAGMALILGVDRFMSE
                     CRSLTNFIGNAVATVVVSRWEGALDRNRLQLALDGRESELPPPVDALPEALPAKG"
     gene            5779..8070
                     /locus_tag="QEL58_000726"
     CDS             5779..8070
                     /locus_tag="QEL58_000726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019662061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent malic enzyme"
                     /protein_id="HDS1675239.1"
                     /translation="MSNEDFKQAALDYHRMSPPGKIKVSATKPMLTQRDLSLAYSPGV
                     AYACEAIKADPQQASELTARGNLVAVISNGTAVLGLGNIGALAGKPVMEGKGVLFQKF
                     AGIDVFDIEVDETDPDKLVDIIASLEPTFGGINLEDIKAPECFVVERKLRERMKIPVF
                     HDDQHGTAIIVGAAVLNAMAITGKKIEDVKLATTGMGAAGISCVNMLVQLGLKPENIL
                     AFDREGVIHTGRTDLDPEKQRYARDTDKRTLAEIVDGADIFLGLSAPGILTAEMVKTM
                     APDPVIFALANPTPEIMPELARAARPDAIIGTGRSDYPNQVNNVLCFPYLFRGALDVG
                     ATAINEEMKIACVRAIAALARRAATDMGSAYGGDTPSFGREYLIPRPFDRRLLVELSA
                     AVAQAAMDSGVASRPIADMGAYRDKLAQFVYRTSLMMKPVYDRARSDKQRVVYAEGEE
                     EVVLQAVQNVVDDGLAHPILIGRPEVIESRIERLGLRLKIGENVEVTNINDDPRFNEY
                     WQYYHGLTGRRGVTVAAAKNLMRSRPTLIAAVMVARGEADAMLTGIVGRFHKKLGYVR
                     SVLPLEPKVTSTSAMTGVINQQGVFFFVDTHVQEDPTAEQLCEATLQAAYRMKLFGIE
                     PKVALLSHSNFGSHDSKDALKMRQVRELLLKRNPRLNVDGEMQGDTAWDEALRQKLLP
                     GSTLQGRANLFVLPNLEAANIAYNLVRVFTDGVAIGPILMGVNKPVHILTTSATSRRI
                     LNMTAIAAVDAQIRKQLEAEKKA"
     gene            complement(8430..11774)
                     /locus_tag="QEL58_000727"
     CDS             complement(8430..11774)
                     /locus_tag="QEL58_000727"
                     /EC_number="3.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GH92 family glycosyl hydrolase"
                     /protein_id="HDS1675240.1"
                     /translation="MTLSDPRRALLPLALALACATTAMPVLAQGLQTSFEPGEPAPTP
                     AAGGLQVSIGDGPAAPYAAKRNAGYSGLHALRYSSNGGSARRELFRTDLPIEAETTLS
                     WLVLPEIVGKDTVASTYVSLDLLLDDGSRVSSSAARDQHGVAIGARAQGASKTLYPQQ
                     WARKAIRLGEVPALKGRRVVAIELEVASAEGAPVSGWIDDVRLDLQPRPQPQRASDWV
                     LTTRGTQANGTFSRGNNFPATAVPHGFNFWTPVTDAGALNWLYRWNEQNDAQNRPQLQ
                     ALALSHQPSPWMGDRQTFQVMPSANRGVPSADRRKRALSFDRSHESARPYRYDVRFDN
                     GIAASIAPTDHAALFRFEFPEDGDANLLFDNVDARGGLTLDAATQTLTGYTDTRSGLS
                     NGASRMYVAARFDKPWRSSGRIDTGRPTGYIKFDAGSERRVNMRIATSLISVEQARHN
                     LALEIAAADTLESVAGRAQDAWDARLARFDIGDASDDQKTTLYSSLYRLFLYPNSGHE
                     NVGSAAAPDWRYANQASASEDNTGGSATRTFAAVRDGKVFVNNGFWDTFRTTWPAYAL
                     FTPDDAGQLVQGFIEQYRAGGWIARWSSPGYADLMVGTSSDVAFADAWLKGIGGFDPA
                     EAYAAALKNATVVPPDRHVGRKGMQRSTFRGYASADVHEGMSWTMEGALNDFGIANMA
                     DELAKRATLPAARERYGTEADYFRQRAASYATMFDPAAGFFQGRTADGRWRVDSKRYD
                     PRVWGHDYTESNGWTFAFTAAHDGEGLAALYGGRDRLAAKLDTFFATPETADPALAGS
                     YGGTIHEMTEARDVRMGMYAHSNQPAHHIPWMYLYAGQPWKTQQHVREILSRLYVGSE
                     IGQGYPGDEDNGETSAWYVLASLGLYPLRMGAPEYVIGSPAFRHARVELQGGAVLTVN
                     AANNTRENVYVQSLKINGKPWTKTWVPHELIAKGATLDFVMGPRPSRWGSGVDDAPPS
                     LTARGQRPQLLHDLLGSGAKATSGDGRALPAMVDDDAGTTVGLGGGAIIALTGLAEGA
                     PTMYTLTSGDGSIRGGQWALEARSGDGSWTLLDQRSGEDFESARQTRPFRIARPGRYS
                     EYRLRLVAPSRMPLAEIELLAPGAAQ"
     gene            12151..12348
                     /locus_tag="QEL58_000728"
     CDS             12151..12348
                     /locus_tag="QEL58_000728"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003483377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-finger domain-containing protein"
                     /protein_id="HDS1675241.1"
                     /translation="MSHTATAPANAEKRYTVHRSDLPLSCPTPEMALWNSHPRVYLPI
                     EDEPNGEAQCPYCGSVFVLAD"
     gene            12364..13479
                     /locus_tag="QEL58_000729"
     CDS             12364..13479
                     /locus_tag="QEL58_000729"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HDS1675242.1"
                     /translation="MRRLTVVQLLPALHSGGVERSTLEIAAALVAAGHRALVVSAGGR
                     LVQPLLDSGAEHLTLDIGRKSLLTLRHLPTLRRLFAEVGADIVHARSRLPAWLGLYAI
                     RAMPAAQRPHWVTTVHGLNSPSRYSAVMTSGERVICVSNSVRDYVRRHYPTVPEATLQ
                     VIPRGVDVAQFPRVARADRRPRLALAADHPWLAQVEGPLLLLPGRGTRLKGHAHALQL
                     LSDVRAAGVPAQLWMLGTDEPGREAYVADLRRQATALGVAEAVQISAPTARIAQAYAA
                     SDLVLQLSDKPEAFGRTVVEALSVGRPVLGWDHGGVGELLQQLQPAGAVPLGDARALG
                     ERALALLAQPPSLPARIPFTLQAMQRDTLRLYADLAG"
     gene            13460..14791
                     /locus_tag="QEL58_000730"
     CDS             13460..14791
                     /locus_tag="QEL58_000730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019338825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-antigen ligase family protein"
                     /protein_id="HDS1675243.1"
                     /translation="MPTLPADATVPLRDDRAGRWAPWWVLAYVAMWPLPGIAETVLGL
                     GALYAAARMVMRRLQRRPHLLSTAAWALTSILFLGYWLPQAFSAIDAIDPAASWTKAA
                     AGLRYLPFMWLVAIAVATPERRRLTFGGLALITGAWTLDALVQAVAGTSPWFWSLEHL
                     KLAVSGHALCPADEAALADRLSGALGPCNLKFGQVLASLSPFLLLPIARRFGNAGWLL
                     AAAALGGVLLLAGSRASWITFALVLAYSGVRQFGWKRLALLALLAVLAAGALTASVPQ
                     LRERFARTAMAWEGGERGVDQALSGRARIWQAAVCMIEEHPINGVGARGFRDAYPACV
                     ADEGPAVWGNAPALHAHQIVLEILAETGVLGLLLWLAAVAQAWRAWRYAPASARERAR
                     PAMLALAVTVFPLNTHLAFYSAFWGGLTVMLAALFAGSLLAREAEDSPPIR"
     gene            complement(14930..15847)
                     /locus_tag="QEL58_000731"
     CDS             complement(14930..15847)
                     /locus_tag="QEL58_000731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010376757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LpxL/LpxP family Kdo(2)-lipid IV(A)
                     lauroyl/palmitoleoyl acyltransferase"
                     /protein_id="HDS1675244.1"
                     /translation="MSDASTAVRPSLRDPRNWPMFAVMFGAFAIARLPWMLQRALGRG
                     VGWISWRLLGSRRRAAEVNLQLCFPEKDEAWRQRLVRDSFDALGVGVFECIRAWWGSI
                     DRIRPQVQIEGLEHLQRMQAEGRGVLLVSGHFMTLEMCGRLLCDYVDLSGMYRKHKNP
                     VYEWAVKFGRLRYAKAMYANEDIRATVRHLKKGGFLWYAPDQDMRGKDTVFVPFFGHT
                     ASTITATHQLARMTGCAVIPYFHRREGGKYFLKIGAPLENFPSEDVEADTTRVNQAIE
                     AMVREAPDQYLWIHRRFKRQPGGRSDFYN"
     gene            15908..17206
                     /gene="waaA"
                     /locus_tag="QEL58_000732"
     CDS             15908..17206
                     /gene="waaA"
                     /locus_tag="QEL58_000732"
                     /EC_number="2.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019662054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid IV(A) 3-deoxy-D-manno-octulosonic acid
                     transferase"
                     /protein_id="HDS1675245.1"
                     /translation="MRKDPVEWILRGLYSAVLYLLLPITVYHLVWRGFRVREYFRRWD
                     ERYASYPQPTGQPRVWLHAVSVGEVNAAAPLVNALRQQRPDIRWVITTITPTGSERVR
                     ALWGDALDHVYLPYDVPGSVNRFLGHFRPSLALILETELWPNMLFGCRDRRIPVYILN
                     ARLSARSLRGYRLLAALIRRALRTVTCVAAQSQDDAERFVQLGAAPEQVQALGNLKFD
                     IATPDVQDFVAQFHAQVPAGRPVWIAASTHDGEEQAVIDLHRRLRQQHPDLLLLWAPR
                     HPERFPKVEALAREQGWNVATRRAMQWPDAGTDVFVIDTLGELMPFYACAQVAFVGGS
                     LQSIGGHNLLEPAAMGTAAVTGPHLHNFSEISRRMREAGALLIGEDVPAVGDLLQHLL
                     DDERAREDMARAGCTLVSNGRGALQRTLALVAPHLPPPRS"
     gene            17431..18657
                     /locus_tag="QEL58_000733"
     CDS             17431..18657
                     /locus_tag="QEL58_000733"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005414415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid transporter"
                     /protein_id="HDS1675246.1"
                     /translation="MDSDSGPGDMGDAGPGRDHLAGVILTLMLGGSVIALVGQHTAAQ
                     AGPAIVLSLLLAALGTAPLLYCLHILGRQLPVAEGLHGLLRARWGRVPAGLLCAALLV
                     ELMATSAGVAQSMASHVHALLASCGIEAGNAMPVALMATLGLLLLGLIGLLPPRRGAL
                     VACALLTVKLGTGLLLLVLAARHVHYALWIPWLPEATAPYRFGPGGVLAASVPLLGMF
                     ACAGLVLGFPGVCGQVRTRQAALLASTLLLAMLLLIVLAALQSGLVEFPALASTRPLS
                     VALQQHPQLQWMMPLLPLAGASGLAALLLVLLRVAARLATQLWTAARDASHGRVAPPM
                     PVAVVLAAALLALAMPMGTLPVLPGPATLLVMAALCLAALRAQVPLPRALPVLAPLAA
                     ALCLLAAAERMRAWPG"
     gene            complement(18759..20117)
                     /locus_tag="QEL58_000734"
     CDS             complement(18759..20117)
                     /locus_tag="QEL58_000734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014648347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family outer membrane protein"
                     /protein_id="HDS1675247.1"
                     /translation="MIRRSLAVALATALLPLSAHAADLLQVYEMARNGDPQLSAAEST
                     RLVDKEGAVQARAALLPQINGQATLNRSRSEADHDANSGTVTSKRRNYTIDGSQTLFN
                     WTQINNLRSQRELSKAADFTLDSANDSLIVRTSAAYFNVLVAIESLNAAQTNEAAAKK
                     QFDFADKRLEVGLAPITDVHEARAQYDQARANTIVAQNTLADNYQALTELTGQPVVNL
                     RGLPADFRPEVPANRGNIDELVHQATNQNPALKAQELKVSAAEASVQAARGGHYPTLS
                     LGGSWGKSATWGDSTGAGSLSPDARTNSIGLTLSVPIFSGGATQSGVRQALAQRDIAQ
                     DGYEQQKRALDRNTRNAYQTLVQGISEVEARRLAVVSAQSAYDASQVGLEVGTRTVLD
                     VIQNQRILFSAQLDYANARYTFLQNRLLLSQSLGALDVAELQDVNRLLTQDAGNPATT
                     TH"
     gene            complement(20134..20781)
                     /locus_tag="QEL58_000735"
     CDS             complement(20134..20781)
                     /locus_tag="QEL58_000735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019662052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-L-isoaspartate O-methyltransferase"
                     /protein_id="HDS1675248.1"
                     /translation="MTIDYAHARELMVEQQIRPWDVLDIKVLDVLARLPREAFVADAH
                     RALAYADVELPIGHGQKMMKPVIEGRTLQALDLQPGDEVLEIGTGSGFLAACIGALAR
                     DVLSLEIDPELAAAARARLDASGLGTNVRVEVADALSWQTERRFDVICVTGAVDVVPS
                     QFASWLRPGGRLFVIQGRSPAMEALLVKADGSTESLFETDIDYLRGAAPAPQFHL"
     gene            complement(20918..21598)
                     /locus_tag="QEL58_000736"
     CDS             complement(20918..21598)
                     /locus_tag="QEL58_000736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008264859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HDS1675249.1"
                     /translation="MSSPTSRKPSAKPAAKAAGPGRPKDLGKRAAILEAAKALFIEQG
                     YTGVSMDAIAAQAGVSKLTVYSHFGDKETLFSEAVQSKCIEMLPDALFVADADGPLRD
                     QLIGIGLAFFELITSDAAISIQRMMMAPETDERLRELFWQAGPERTCAALADFLRARG
                     ERGELEIADYYLAGQQFLTLVKGEVHMHMMCGMPLSPVECDPLTHVTASIDFFLRAYA
                     PRGAGTAG"
     gene            21716..22846
                     /locus_tag="QEL58_000737"
     CDS             21716..22846
                     /locus_tag="QEL58_000737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HDS1675250.1"
                     /translation="MKIVRWMGGMVWVAALAACSGQEQAPQAAVPVLVVHPGEQAGQA
                     PAAFPGTVRARQESPLSFRVGGNLVKRHVDAGQRVKKGDALAELDVADFALQARASQA
                     QLAAAEADLVRARDDLKRYQVLADQQLVSRSQLDQQSAAFKAAQGQANAARANLDVLR
                     NQADYAQLRAPADGVIASREAEAGQVVSAGQTIFNLAADGGREVLIDLPEATIRDYAV
                     GQPVEVELWNRPGQRLPGTIREIAAAADPQARTYATRVSLAADALADVELGQSARVYS
                     SAGRHGTLQLPLGALQRGANGAASVWVVDPANSTLKAAAVTTGAYGSETVPVLTGVGA
                     GDWVVAAGGHLLRAGQPVIAVDRQNRPVLKPAAPAAAAKAKE"
     gene            22851..26012
                     /locus_tag="QEL58_000738"
     CDS             22851..26012
                     /locus_tag="QEL58_000738"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HDS1675251.1"
                     /translation="MRRFNLSEWALANRPLVLFAMLAFALIGAWSYKHLGQSEDPPFT
                     FKAMVVRTLWPGATAEQVSRQVTEPIEKALMNTGEYEFIRSYSRPGESQVIFMARDSL
                     RSRQIPDLWYQVRKRVGDIRATLPREIVGPFFNDEFGDTYGNIYALTGKGFDYAVMRD
                     YADRIQLELQRVPDVGKIDLVGLQDEKVWIELSNTRLATLGVSMQQVQQALADQNAVT
                     GTSFFETATDRVQLRVTGQFNDIEAIRQFPIRAGDRTVHLGDIAEVKRGFADPASPKM
                     RFMGEEAIGLAVAMKDGGDILKLGANLDAEFERLQKTLPAGMQLRKVSDQPQSVEESV
                     GEFVQVLTEAVVIVLLVSFFSLGLRTGLVVGVTIPLVLAMTFFVMHYFDIGLHKISLG
                     ALVLALGLLVDDAIIAVEMMATKMEQGYDRLRAASFAWESTAFPMLTGTLITAAGFLP
                     IATAASSTGEYTRSLFQVVTIALVVSWIAAVLFIPYLGDKMLPDLFNPQPPKPGSLSA
                     RWHARRQQWADRYPALANLIAPPQHGHDHDPYQRPFYRSFRRFLDACLRRRWWVIAAT
                     IALFVFSLMMFRFVPQQFFPDSTRPELMVDIELAEGASLRSTQAQAEKLEKLLSSRDG
                     IANYVSYVGTGSPRFYLPLDQQLPATNFAQFVVLAKDIKSRESTRDWLLHEVIPKFPD
                     VQMRVTRLENGPPVGYPVQMRISGEHIERVQAIARQVEAKVRENPHVMNVNLDWSEPS
                     KVVRLVIDQERARALGVSSAQVSQFLSSSLAGQSVSVYREGNRQIEMLLRGPADERNQ
                     LELLSSLSMPTANGGSITLSQVATMEYGFEDGIIWHRNRLPTVTVRADISDGMQPLDV
                     VHQILPTLDGIRAELPSGYLLETGGTVEDSARGQNSIKAGMPLFLVVVATLLMLQLRS
                     FSRAAMVLVTAPLGIIGATLFLLLFRAPFGFVALLGTIALAGMIMRNSVILIDQIQQD
                     IDAGHDRWHSIIDATVRRFRPIVLTALAAVLAMIPLSRSAFYGSMAISIMGGLIVGTV
                     LTLVFLPALYAAWFRVKPDESGA"
     gene            complement(26177..27082)
                     /locus_tag="QEL58_000739"
     CDS             complement(26177..27082)
                     /locus_tag="QEL58_000739"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005419122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDS1675252.1"
                     /translation="MDRIDRFRIFTRVVECASFTRAADQLGLPRSTVSAAIAELEQRL
                     GTRLLQRSTRRVSTTHDGDVFHARCLRLIAEVEDAESLFRQDDAQPVGLLKIDVPSRI
                     GRRILAPALPDFFARYPQVELDLGMTDRAVNLIEDGCDAVLRVGQLSDSSLVARSLGQ
                     LDFVNVAAPAYLREHGVPQHPADLQQHRAVNYASPTTARVEAWEWQDGSQLHTLPMPG
                     WVRVNSAEASIACCVAGLGLLQIPRYDVQAELQSGALVEVLPQHVAQPLPVTLLQPHR
                     QHRAHRVRVFIEWLLPLLRTGLQLQ"
     gene            27200..27973
                     /locus_tag="QEL58_000740"
     CDS             27200..27973
                     /locus_tag="QEL58_000740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017816639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HDS1675253.1"
                     /translation="MTDHSLKGKTVLIAGGAKNLGGLLARDFAAQGARAIVIHYNSAA
                     TQADAEATVAAVQAAGSTAVALQGDLTSAAAMERLFADAVAAVGRPDIAINTVGKVLK
                     KPLLEISEAEYDEMSAVNAKAAFFFLKEAGRHVNDGGRICTLVTSLLGAFTPFYSSYA
                     GTKAPVEHFTRAASKEFGERGISVTAIGPGPMDTPFFYPAESADAQAYHKTAAALSAF
                     TRTGLTDIADIVPWIRFLVTDGWWMTGQTILVNGGYTTK"
     gene            28088..29122
                     /locus_tag="QEL58_000741"
     CDS             28088..29122
                     /locus_tag="QEL58_000741"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675254.1"
                     /translation="MFPRTFHAFTLMLIASSSVADATPAGTDAQQFQQNLIAVLECRA
                     TPAVRQALGSQLRAVRYGSATERPAHLRGWRFIAADHPGIESAATRIELPAPITANGI
                     TTRELLADDLGLGMSLDAVQRERIVAEDGMQMRISTLHEPFRAWWRPASDVAAAAQAW
                     RVIRSEGAGNRLSCDYRERYQKLDDQQAADRLREDLVAVLECRADVAAWQRFGEFWTR
                     VSAHSPLGWPAQVRALDAPACMAREGGSRCERITLDAPITVHGLAVSSVMIEPSYASG
                     HVAADLGVVPVDDALKAAIPGATAAGEIIWTLPAAPLQERPRERFVVRTDDGRTLMGC
                     ATSKAIHSGR"
     gene            complement(29171..30232)
                     /gene="leuB"
                     /locus_tag="QEL58_000742"
     CDS             complement(29171..30232)
                     /gene="leuB"
                     /locus_tag="QEL58_000742"
                     /EC_number="1.1.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005419119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydrogenase"
                     /protein_id="HDS1675255.1"
                     /translation="MHAEIVVLPGDGIGPEVAAAAVAVLKAIAERFNHTFAFSEHDIG
                     GIAIDRHGEPLPAATLAACQAANAVLLGAVGGPKWSDPNAMVRPEQGLLAIRKALGLY
                     ANLRPVRTHEAALHASPIKAELLQGVDFVVVRELTGGIYFGDKTRDADSASDLCRYTV
                     AEIERVLRSAFRLAQQRRGKVTSVDKANVLETSRLWRDVAARIGREEFPDVALEHQLV
                     DSMAMHLLAKPREYDVIVTENMFGDILTDEASMLAGSLGLLPSASLGEPGAVGIYEPI
                     HGSAPDIAGKGIANPYATIFSAAMLLRHSLGLDVEAAAVEAAVHAVLDEGVFTADLAA
                     KGQAVSTAAATDAVLAKLG"
     gene            complement(30222..30800)
                     /gene="leuD"
                     /locus_tag="QEL58_000743"
     CDS             complement(30222..30800)
                     /gene="leuD"
                     /locus_tag="QEL58_000743"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006390726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase small subunit"
                     /protein_id="HDS1675256.1"
                     /translation="MAGFHTLSSASVVLRQTNIDTDQIIPARFLSTTERAGLGRNAFN
                     DWRWQADGSPVADFAFNQPHNAGRSILLAGRNFGCGSSREHAPWALTDLGLRAIVSSE
                     IADIFRGNSLKNGLLPIVLDEADVQALMQHPDDELTIDVAARELRTPDGRVYSFPLDG
                     FSQTCLLEGVDQLGYLLGRVPEIERYESEHAR"
     gene            complement(30800..32218)
                     /gene="leuC"
                     /locus_tag="QEL58_000744"
     CDS             complement(30800..32218)
                     /gene="leuC"
                     /locus_tag="QEL58_000744"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005414408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase large subunit"
                     /protein_id="HDS1675257.1"
                     /translation="MTSAPRTLYDKLWDAHVVVPESDSAPAVLYIDLHLIHEVTSPQA
                     FTELRERGLSPRRPDRTKATMDHSTPTLPAAADGTLPYASAASEAQVATLARNCAEHG
                     IELFDMASDNRGIVHVIAPEQGFTQPGMTIVCGDSHTSTHGAFGSLAFGIGTSEVGHV
                     LATQCLLQRKAKTLAITVDGPLAPGVGAKDVVLHIIGVIGVNGGTGHVIEFRGSTITA
                     MDMEQRMTLCNMSIEAGARAGMVAPDQVTFDFVANTPRGPKGADFEAAVARWQQLRSD
                     DGARFDSEVHIDAADIRPTLTWGTHPGTAIAVDAPIPAANDAAAQKGLDYMHFQAGKA
                     LAGTPVDVVFVGSCTNGRLSDMREVAQVLRGRRVADGVRMLVVPGSEIVKREAEAEGI
                     HEIVRAAGAEWREPGCSMCIAMNGDLVAPGQLAVSTSNRNFEGRQGPGSRTLLASPMS
                     AAWAAVKGQVADTRELFAQEVA"
     gene            complement(32279..33052)
                     /locus_tag="QEL58_000745"
     CDS             complement(32279..33052)
                     /locus_tag="QEL58_000745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014038407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HDS1675258.1"
                     /translation="MSAFDTTALPAGQHWNAQDYAIDAGFVPLLGGAVARLLDPRAGE
                     RILDLGCGDGVLSTELALSGARIHGVDASPELVIAARARGVDAQVMDGRALTFDSEFD
                     AVFSNAALHWMGGPDRVLEGVRRALRPGGRFVAEFGGHGNVATIIAAVQAARVAHGHG
                     ASAFQWYFPSADAYADRLRQHGFQVQLIECTPRPTPLPTGVAGWLRVFAAPLLDDLPA
                     EARAIVREAATALLADLPRNAAGQPLADYVRLRVLARRR"
     gene            complement(33063..34649)
                     /locus_tag="QEL58_000746"
     CDS             complement(33063..34649)
                     /locus_tag="QEL58_000746"
                     /EC_number="2.3.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006390721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-isopropylmalate synthase"
                     /protein_id="HDS1675259.1"
                     /translation="MTTIERITTPRIRIFDTTLRDGEQSPGCSMSPPQKLVMARALDE
                     LGVDIIETGFPASSQSDREAMALIGRELRRPSLSLAVLSRCLQADIETSARALEAAAN
                     PRLHVFLSTSPLHREHKLRMTREQVLESVRKHVSLARSYIDDVEFSAEDATRTELDYL
                     IEVSRVAIAAGATTINLPDTVGFTTPEEIRAMFQQVIAGVADVPNAANVIFSAHCHND
                     LGLAVANSLAAIEGGARQVECTVNGIGERAGNCSLEEIAMVLKVRQAFYEQDSAINTP
                     RIVGTSQLLQRLVGMPVQRNKAIVGANAFAHESGIHQHGMLRHRGTYEIMRPEDVGWE
                     DSQMVLGRHSGRAAVEARLRALGFWLDEDELKLVFEQFKGLCEQQRVVTDADLQTLMQ
                     GGSNAQGYRLASMTISDVGSRANALVELSDPDGNRVAETAQGDGPVDALFGALSAATG
                     VQLMLDSYHVHSVGIGADARGEANLSVRHEGVEYDGTGTSKDIIEASALAWLDVANRL
                     LRQRQAAAHSSTDIPTPATA"
     gene            complement(34646..35737)
                     /locus_tag="QEL58_000747"
     CDS             complement(34646..35737)
                     /locus_tag="QEL58_000747"
                     /EC_number="4.3.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014038405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine dehydratase"
                     /protein_id="HDS1675260.1"
                     /translation="MPAADASQESDVGDVSVADVLAAQARLRRFLPPTPLHHAERFGT
                     WLKLENLQRTGSYKVRGALNALLAGRERGDTRPVICASAGNHAQGVAWAAYRLDVPAI
                     TVMPHGAPATKIAGVAHWGATVRQHGNSYDEAYAFAVELAQRHGYRFLSAFDDADVIA
                     GQGTVGIELAAHAPDVVIVPIGGGGLASGVALALKSQGVRVVGAQVEGVDSMARAIRG
                     DVREIAPAASLADGVRVKVPGFLTRRLCTSLLDDVVIVREAELRETLVRLALEEHIIA
                     EGAGALALAAGRRVAGRRKCAVVSGGNIDAGVLAGLLTDIRPRPPRKPRRRRSETPRS
                     PGKASAPASPASSPSHLQAVAPAVEEISL"
     gene            complement(35834..36085)
                     /locus_tag="QEL58_000748"
     CDS             complement(35834..36085)
                     /locus_tag="QEL58_000748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014038403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase"
                     /protein_id="HDS1675261.1"
                     /translation="MHYRLDLVLHPAEGALLRVIGMAERRGFAPRAISGAPVAADDGR
                     WHLQLVVDGQRPAETLCRQIEKIYDCVSVQVTAVEGASV"
     gene            complement(36069..37805)
                     /locus_tag="QEL58_000749"
     CDS             complement(36069..37805)
                     /locus_tag="QEL58_000749"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002804901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase 2 catalytic subunit"
                     /protein_id="HDS1675262.1"
                     /translation="MNSSTHRSAPPNGARWLTQALEAEGVRTLFGYPGGTIMPFYDAL
                     VDSSLKHILVRHEQGAALAANGFARASGQVGVCVATSGPGASNLVTGIADAMLDSVPM
                     VCITGQVATPLLGTDAFQELDVFGLTLPIVKHSWLVRSVDDLPRVVADAFRIAREGRP
                     GPVLIDLPKDVQLADASHLPAHVPSSVEPPPAPAEVAIAEAIAALAAAEKPVVYAGGG
                     IALGDAVQDLRDFVEVSAIPTVMTLRGLGALPASHPQSLGMLGMHGTRAANMAVQESD
                     LLLVLGARFDDRATGKLAEFAPFARVVHIDADAYEISKLRSADVAVPGNVGHAIRALR
                     AAFPSPKAHQDAWRKRCAQHRDRFAARYDAPGQHIYAPALLKRLSELAPADAVIACDV
                     GQHQMWVAQHCRFNHPRNHLTSGALGTMGFGLPAAMGAQFACPDRTVVLVSGDGSFMM
                     NVQELATIARCRLPVKIVLLDNSSLGMVRQWQELFFAERYSEIDLSDNPDFVALAQVF
                     GIAATRIDARDDVEGGLAALLAEPGPALLHVAIDARANVWPLVPPNTANSTMLESNPA
                     HARQETPNALPA"
     gene            complement(37845..38819)
                     /gene="ilvC"
                     /locus_tag="QEL58_000750"
     CDS             complement(37845..38819)
                     /gene="ilvC"
                     /locus_tag="QEL58_000750"
                     /EC_number="1.1.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014648333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketol-acid reductoisomerase"
                     /protein_id="HDS1675263.1"
                     /translation="MSTNDLPQTKIAVIGYGSQGRAHALNLRESGFDVVVGLRPGGPT
                     EVKAQADGFTVKAPAEAVKDADLVAVLTPDMVQKKLYDDVLAPNMKQGAVLLFAHGLN
                     VHFDMIKPREDLDVVLVAPKGPGALVRREYEIGRGVPCIWAVYQDKSGKAADYALAYA
                     GGLGGARANLIQTTFKEETETDLFGEQAVLCGGASALVQAGFETLVEAGYQPEIAYYE
                     VLHELKLIVDLFYEGGISRMLEFISETAQYGDYVSGPRVIDAGTKARMKEVLKDIQDG
                     TFTKNWVAEYEAGLPNYNKFKQADLEHPIEKVGKELRAKMVWLQGQAA"
     gene            39508..41226
                     /gene="ggt"
                     /locus_tag="QEL58_000751"
     CDS             39508..41226
                     /gene="ggt"
                     /locus_tag="QEL58_000751"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005414401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HDS1675264.1"
                     /translation="MSRRLARTLLAAAVLATVPALSYAADRITGHTFATRSEVIAPHA
                     MAATSQPLATQIALDVMKKGGSAVDAAIAANAALGLMEPTGNGIGGDLFAIVWDPETQ
                     KLYGYNGSGRSPKSLTLAEFQRRGLKDIPATGPLPVSVPGAVDGWFALHERFGRTPMA
                     DNLAPAIRYAREGHPVAEVIAYYWDRSVPKLSQYPGFKEQFTINGHAPRKGEMWKNPN
                     LASTLQKIADGGRDAFYKGDIARTIGDYFKANGGYLSYQDMADHHGEWVEPVSSNYRG
                     YDVWELPPNSQGIAALQILNVLEGYDFSKIPFGSPEHVHLFVEAKKLAFADRARFYAD
                     MAFQPAPVQKLISKEYAAQRRALISMDKALKEVQPGTPKQLEEGDTIYMTVADADGMM
                     VSLIQSNYRGMGSGMAPPGLGFILQDRGEMFVLQKNHPNGYAPGKRPFQTIIPAFITK
                     GGKPYASFGVMGGAMQPQGHAQIVMNLVDFGMNLQEAGDAPRIQHEGSTEPTGQATAM
                     TDGGEVNLETGFPYETVRALMRKGHRIVFADGPYGGYQAIMRDPDTGVYYGASESRKD
                     GQAAGY"
BASE COUNT         6328 a        13717 c        14339 g         6875 t
ORIGIN      
        1 cgcgatggcg gatcagcagc tggctcatca gcgcccgcag cgccggcggt ttcaccggct
       61 tggccatcat tccccagccg cgctcggcgg ccatctcgcg caaccccgca tcgcgctcgg
      121 cggtcaccag caccactggc gggcgtgcca gccacagttc cgccagcgtc tcgtacagca
      181 ccgggccgtg gtgatcgccc atgcgcacat ccagcaacac cagttccggc acggttgtgg
      241 cactggccaa ctgcagcgcc gcctgcgggc cgtcggccag caccacctcg cagccccagc
      301 gttccagcaa cgcgcggctg gctgcgcaga cgtgaggatc gtcatcgatc acccagaccc
      361 gacgcccgcg cagcggattg tccgcggccg gttcctgcac cagcaccggc gccggtgccg
      421 tagtgggaat cgcgctggcg tcgccgaacg gcacacccac cgcgaacacg ctgccctggc
      481 ctacctgcga gcgcagccgg atcgggtggc cgagcaggcg gccgatgcgg tcgacgatcg
      541 ccaggccgag gccggcaccg cgctgctggc cgtcgtgcag gcggcggaat tcctcgaaga
      601 tctcgccctg cagcgcatcg ggaataccgg gtccctggtc gtgcacttcg atccacagca
      661 gcccgtcgcg gcgccggcaa ccgagcagca cgcggccgcg ttcgctgtag cgcagcgcat
      721 tggacaggaa gttctgcagg atgcgccgca gcagcgcttc atcgctgacc accaccgcat
      781 cggtatcgat ccagtccacc accagcccgc gcgactgtgc ggcgatgccg aactcgcgcg
      841 ccagtgtctg cagcagcggc cccagccgga aggcctgcac gcgggtcggc aggcttcccg
      901 actccagccg cgcgatatcc agcaggctgt tgaggatcgc gtcctgcgcc gcgagtgcag
      961 cgtcgatgtg gtcgctggtc tgctgctgtg ccggatcgct cagcttgccg cgcagtaccg
     1021 agacgaacat gcgcgcggca ttgagcggct gcagcaggtc gtgcaccgcc gaggcgacga
     1081 agcgggtctt gtagcggttg gcctgctcgg cttcgcggcg tgcttcgtcc aggtcgtgcg
     1141 tacgctcggc gatgcgatgc tcgagtgcgt cggccagcga gcgcagttcg cgcgcggcgt
     1201 tcttgtagct ggtgatgtcg gcatagctgg tgacgaagcc gccgtcgggc agcggattgc
     1261 cgcggatctc cagcaccgtg ccgtcgtcct tctcgctttc gcgcatgtgc gggcggccac
     1321 tgcgcaggtg attgaggcgg cgctcgatcg cctcatcgac cgggcccggg cccagcaggc
     1381 cgcgacgcgc gttgaagcgg aacagctcct cgatgggccg gcccacgcgc accaggtcca
     1441 gcggaaagcg gaacagctcg aggtagcgcg aattccacgc gaccaggcgc agctcgcggt
     1501 cgatcaccac cacgccttgt ggcagatgtt ccaggctgcg gctgaggcca ctgtcggcgt
     1561 cggtggcagc ctgcagcagg ccatcctgcg cggtgcgcag ctcctgcgcg tgctgcttga
     1621 gcagggtttc cagttcacgg cggctgcgca ggcggtgctt ggccaggcgc cggcgctgct
     1681 gcacgaacag caccaggaag cccagtgcga gccacgcggc accaccggtc agcgccgccg
     1741 cgcggccggc ggcggtggca gcgctggcgt cgtgcagcag gtgcaggttc caaccttcgg
     1801 cgggcagtgc aaggctctgc cacagcatcg gttgtaccag ggcagggtcg agcaggcgca
     1861 ccatgcggcc accgtcggcc agcacatcct cggtgcgtgc gcgcagcggc tgcagggcac
     1921 ggtcggcgta ctgccgggcg tcgagcattt cgcggcgttc atcagcgccc aaggggcgca
     1981 gcaggcggta gcgccagttg tcccggttgg ccaggaacac cacgtcgtgg tcatcgctgg
     2041 ccagcaccac atccgggctg ctcagccatt cctgctccag cgccgacagt tcgaccttga
     2101 tcaccaccac gcccagtcgc ttgccgtctt cctcgatggc ctgcgacagg tagtagccgg
     2161 gtacgccggt ggtcatgccg atgccgtaga aacggccgcg gccctgggcc agcgcctggc
     2221 ggtagtacgg gcggtaactg tagttctcgc cgacgttggt ggtcggctgg tcccagttgc
     2281 tggcggccac ggccacgccg tcatggccga ccagggtcag ggtggaggcg cgggtgacct
     2341 cgttggcacg ctgcagcttg aggttcagtc gttgccgttc ggcaggcgag ggcggcacgc
     2401 gcagggcgtg cagcagatcc ggatcaagcg ccagcacctg cggcagcgtg ccgaagcggt
     2461 cgatgcgctg ctgcaggccc tggccataca gctgcagctg gcgttgcacc tggctgcttt
     2521 cctcgcccag tgcgcggcgc caggcgtagt ggccggcggc gaccgcgcac agcacggtac
     2581 cgccgaccat caccaggatc gtcagcaaca gcatccggtg gcggctgagc cagtacatgg
     2641 cggcagtcta cgcagggccg gcgggcgtgg cgtgcacgcc tgccggggtc tgacgtggaa
     2701 ggggtcagaa gtgcatctgc gcgcgcagct cgaagatttc cggcgtgctg tgcacgccac
     2761 gacggctggc gtcgaccttc acgtagttgg cctggaactt gaagtggctg gtgaggtacc
     2821 agttcgcacc cagggtcagg tcgtgctggc ggccaccgag gatgctgccg tcgtcgaggt
     2881 ccaggcggct gtagcgtgcc accagttcaa ccgcgccgta gttgtgcgcg ggcttgatgt
     2941 tggccacggc gccggcgttg tacgggcgcg attcgccggt cagcacccag ctggccatcg
     3001 cgtactggcc actgccggtg tagtcgggca ggcccttgcg ggtgacggtg gcctgcaggg
     3061 cttcggcctg cagcgagaac gggccgcgga tccagatgcc ttccaggccg gtgcggcgga
     3121 tctggtcggc ggtgaccagc gcgccggagt cgacgtaacg gatgtcggtc aggccggctt
     3181 ccggacgtgc gcgcaggcgt gcgctggctt cgtggtgcac atcgcggcca tcgctgtagc
     3241 cgcgcggatt ctcctgcgaa taagccacgc ccaggtggat cacatcaccc ggcgccttca
     3301 ccggcgtcca cacggcgcgc accgcctggg tggtgccggg gttgtcaccc tgcaggtcct
     3361 tgccgccata ggcgccggcc tgcagcaggt actgcgggcg ctccagcacc cattccacgc
     3421 cggtacggcg gccggcgtag aacgcctgca ccggcagcgc ggtttccagg aagctgccgg
     3481 cacgcgagga ggtgttcgca tccaggccga ccggggtctt catgtagccg aagcggaaac
     3541 ggccgacgtc gcggccgaag aacgccttgc tctcgaaacg cacgaacacg tccagccagg
     3601 tgtcggcctg gaagtcgtaa tagaccatcg cgtcgtagac gcccttcttc ttcaacgttg
     3661 cgccgaactc cttgcggcgc acggcatcat cgtcctcaag gccgctggcc gaggagaagt
     3721 cgttgtagtc gtaggcgatg ttggcggtgg cggccagctc ggtgccatcg ttgaaggtgt
     3781 acttggtcgg ccagttgtcg aaatccgctg ccgaagcgaa ggcgggaagg gcggccagcg
     3841 acagggccag caaggtggga atcgggcgca tgttgggtgc ggctctctca gattgcgtgt
     3901 ggacaggaca tcaacggccg caagggccgg aactttcgca aggacgcgcc cggccgttca
     3961 gcccgggcca ccggcctccc cgtgatcggg cggtgcggcg ccagtgtagg caccgtggcc
     4021 gcctgaaccg gggggctagt accaataggt tatctgcgcc ggcgtgcctg gcgcgtacaa
     4081 aggcgtccat tggtcgcacc cccccgtgca tgcagcacag ggcccgcgat cagtttccac
     4141 ggtaacggtt cccgtgctgt cccggagccg tacgtgcctg aaaacgcccc ttccggagta
     4201 cgccatgcac atcccgaccg cagccccggc gcctgcaaag ccgttgccga tctatcgcca
     4261 gctgtatttc caggtgatcg tggcgatcgt cctgggcgcc atcctcggcc actacgaacc
     4321 gctgatcggc gagaagatga agccgctcgg cgacgccttc atcaacctgg tgaagatgat
     4381 catcgcgccg gtgatcttcc tgaccatcgt caccggcatc gccagcatga cccacctgcg
     4441 caccgtgggc cgggtgttcg ccaaggcgat ggcgtacttc ctgttcttct ccacgctggc
     4501 gttgatcgtc ggcatgatcg tggcgcacgt ggtgcagccc ggcgccggca tgaacatcaa
     4561 cccggccgag ctggaccaga ccgcggtgca cagctacgtc gagaagtcgc atgacctgac
     4621 cctggtcggc ttcctgatgg acatcatccc gaagacgctg ctcagcgcct tcgtcgacgg
     4681 caacatcctg caggtgctgt tcgtggccgt gctgttcggc atcgcgctgg cgatggtggg
     4741 cgagaagggc aagccggtgc tgaacttcct ggaggcgctg gtcgccccgg tgttcaagct
     4801 ggtgcacatc ctgatgaagg ccgccccgat cggtgccttc ggtgcgatcg ccttcaccat
     4861 cggcaagtac ggcgtcggtt cgctgatcaa cctggcctgg ctggtgggct cgttctacct
     4921 caccgcgttc ctgttcgtgg cggtcatcct gggcctggtc tgccgcctgt gcggcttctc
     4981 ggtgttcaag ctggcgcgct acctgaaggc cgaactgctg ctggtgctgg gcacctcctc
     5041 gtcggagtcg gcgctgccgt cgctgatgga gaagatggaa cgggccggct gcagcaagtc
     5101 ggtggtgggc ctggtggtcc cgacgggcta ctcgttcaac ctggacggca ccaacatcta
     5161 catgaccctg gccgcgctgt tcatcgccca ggccaccaac accgaactga ccctgggcca
     5221 ccagatcgcc ctgctgctgg tcgccatgct cagctccaag ggcgcggccg gcgtcaccgg
     5281 tgccggcttc atcaccctgg ccgccaccct ggcggtggtg ccggaagtgc cggtggccgg
     5341 catggcgctg atcctgggcg tggaccgctt catgagcgaa tgccgctcgc tgaccaactt
     5401 catcggtaat gcggtggcca ccgtggtggt ctcgcgctgg gaaggcgcac tggaccgcaa
     5461 ccgcctgcag ctggcgctgg atggccgcga aagcgagctg ccgccgccgg tggatgcgct
     5521 gcccgaggcg ctgccggcca agggctgatc caggtgtgtg gtaccgcggg gccgatcacg
     5581 acagtggtac ggccccgcgg cgtttcaagg cgtcccacgg ctgtcacgcg aggcgccgaa
     5641 gctggtatca aggcctggtc gcatacggca cggaattgtg cggtcgcagc atgcctgcga
     5701 caggatagcg acaggtccag acgctccaac gggggtatca tcccctgtcc cttctgccca
     5761 ttcatgtaac ccacatcgat gtccaacgaa gatttcaaac aggccgccct cgattaccac
     5821 cggatgtctc cgcccggcaa gatcaaggtt tccgctacca agcccatgct gacccagcgc
     5881 gacctgtcgc tggcgtattc gccgggcgtg gcgtacgcct gtgaagcgat caaggccgac
     5941 ccgcagcagg ccagcgagct gaccgcgcgc ggcaacctgg tggcggtgat ctccaacggc
     6001 accgcggtgc tgggcctggg caacatcggc gcgctggccg gcaagccggt gatggaaggc
     6061 aagggcgtgc tgttccagaa gttcgccggc atcgatgtgt tcgacatcga agtggatgaa
     6121 accgacccgg acaagctggt cgacatcatc gcctcgctgg agccgacctt cggcggcatc
     6181 aacctggaag acatcaaggc gccggaatgc ttcgtggtcg agcgcaagct gcgcgaacgc
     6241 atgaagatcc cggtgttcca tgacgaccag cacggaacgg cgatcatcgt cggcgcggcc
     6301 gtgctcaacg cgatggcgat caccggcaag aagatcgagg acgtgaagct ggcgaccacg
     6361 ggcatgggcg cggccggcat ttcctgcgtg aacatgctgg tgcagctggg cctgaagccg
     6421 gagaacatcc tggccttcga ccgcgagggt gtgatccata ccggccgcac cgacctggac
     6481 ccggaaaagc agcgctatgc gcgcgacacc gacaagcgca ccctggccga gatcgtcgat
     6541 ggcgccgata tcttcctggg cctgtccgcg ccgggcatcc tgaccgccga gatggtcaag
     6601 accatggcgc cggacccggt gatcttcgcg ctggccaacc cgaccccgga aatcatgccg
     6661 gaactggcgc gtgccgcccg tccggacgcg atcatcggca ccggccgttc ggactacccg
     6721 aaccaggtca acaacgtgct gtgcttcccg tacctgttcc gtggtgcgct ggacgtgggc
     6781 gccaccgcga tcaacgagga aatgaagatc gcctgcgtgc gtgccatcgc tgcactggca
     6841 cgccgcgccg ccaccgacat gggctcggcc tatggcggcg acaccccgag cttcggccgt
     6901 gaatacctga ttccgcgtcc gttcgaccgc cgcctgctgg tggagctgtc ggctgccgtg
     6961 gcccaggccg cgatggactc gggcgtggcc tcgcgcccga tcgccgacat gggcgcctac
     7021 cgcgacaagc tggcccagtt cgtctaccgc accagcctga tgatgaagcc ggtctacgac
     7081 cgcgcgcgca gcgacaagca gcgcgtggtg tacgccgaag gcgaagagga agtggtgctg
     7141 caggcggtgc agaacgtggt cgatgacggc ctggcgcacc cgatcctgat cggccgcccg
     7201 gaagtgatcg agtcgcgcat cgagcgcctc ggcctgcgcc tgaagatcgg tgagaacgtt
     7261 gaagtcacca acatcaacga cgacccgcgc ttcaacgagt actggcagta ctaccacggc
     7321 ctgaccggcc gtcgtggcgt gaccgtggcc gcggcgaaga acctgatgcg ttcgcgcccg
     7381 accctgatcg ccgcggtgat ggtggcgcgt ggcgaagccg atgcgatgct gaccggcatc
     7441 gtcggccgct tccacaagaa gctgggctac gtgcgcagcg tgctgccgct ggagccgaag
     7501 gtcacctcga cctcggcgat gaccggcgtg atcaaccagc agggcgtgtt cttcttcgtc
     7561 gatacccacg tgcaggaaga cccgaccgcc gagcagctgt gcgaagccac gctgcaggcg
     7621 gcctaccgca tgaagctgtt cggcatcgag ccgaaggtgg cgctgctgtc gcactccaac
     7681 ttcggcagcc atgattcgaa ggacgcgctg aagatgcgcc aggtgcgcga gctgctgctc
     7741 aagcgcaacc cgcgtctgaa cgtggacggc gaaatgcagg gcgacaccgc gtgggatgaa
     7801 gcgctgcgcc agaagctgct gccgggctcg accctgcagg gccgcgccaa cctgttcgtg
     7861 ctgccgaacc tggaagcggc caacatcgcc tacaacctgg tgcgtgtgtt caccgacggt
     7921 gtggcgatcg gcccgatcct gatgggcgtg aacaagccgg tgcacatcct gaccaccagc
     7981 gcgacctcgc gccggatcct gaacatgacc gcgattgctg cggtggatgc gcagatccgc
     8041 aagcagctgg aagcggaaaa gaaggcataa gccttcttcc cgattccagc tgcagaagcg
     8101 cgccccacgg ggcgcgtttc tgtttccgca aggcggaaac ggctcgtgcc ggccgctggt
     8161 ccgtgccaca cgcgcttcgc aacccggtca tttgcctgca accccgctgg ggcccaatac
     8221 gcccacgcgg cccggccgtg ggaagggacc ggaccggcct tcccaccctg ggcccgacca
     8281 cctccccatc ggcgaaagtg tcatgcgcaa tcgagtgacc cggcggtact tccagcagtt
     8341 gttcgcgctg tacgcaggat tcgtgcggtc gcgctgaggc cgccagctgc cgcggcgcgg
     8401 cgggcatccg tgcccaccgt gcatgcggct tactgcgccg cgccgggtgc cagcagttca
     8461 atctccgcca gcggcatccg gctcggtgcc accaggcgca ggcggtactc gctgtagcga
     8521 ccgggcctgg cgatgcggaa cggccgggtc tggcgagcgg attcgaagtc ttcgccgctg
     8581 cgctggtcca gcagcgtcca gctgccgtcg ccgctgcggg cctccagcgc ccattggccg
     8641 ccgcggatgc tgccgtcgcc gctggtcagc gtgtacatcg tcggggcgcc ctcggccagc
     8701 ccggtcagcg cgatgatcgc gccaccgccc aggccgaccg tggtaccggc atcgtcatcc
     8761 accattgcag gcagcgcgcg gccatcgcct gatgtggctt tcgcgccgct gccaagcagg
     8821 tcgtgcagca gctgcgggcg ctggccacgc gcggtcagcg agggcggcgc gtcgtccacg
     8881 ccactgcccc aacgcgacgg ccttgggccc atcacgaagt ccagggtagc gcccttggcg
     8941 atcagttcgt gcggcaccca ggtcttggtc cagggtttgc cgttgatctt cagcgactgc
     9001 acgtagacgt tctcgcgcgt gttgttggcc gcgttcacgg tcagcacggc gccgccctgc
     9061 agttccacgc gtgcgtgccg gaatgccggc gaaccgatca cgtactcggg ggcgcccatg
     9121 cgcaacgggt acaggcccag cgaggccagc acgtaccacg ccgaggtctc gccattgtcc
     9181 tcgtcccccg gatagccctg gccgatctcg ctgccgacgt acagccgcga caggatctcg
     9241 cgcacgtgct gctgggtctt ccacggctgc ccggcataca ggtacatcca cgggatgtgg
     9301 tgcgccggct ggttgctgtg cgcgtacatg cccatgcgca catcgcgtgc ttcggtcatt
     9361 tcatggatgg tgccgccgta ggagccggcc agcgccgggt ctgcggtctc cggggtggcg
     9421 aagaaggtat ccagcttcgc cgccagcctg tcgcggccac cgtacagcgc ggccaggccc
     9481 tcgccatcgt gggcggcggt gaaggcgaag gtccagccgt tggactcggt gtagtcgtgg
     9541 ccccacacgc gcgggtcgta gcgcttggaa tccactcgcc agcggccgtc ggcagtgcgg
     9601 ccctggaaga agccggcggc cggatcgaac atcgttgcgt agctggccgc gcgttggcgg
     9661 aagtagtcgg cctcggtgcc gtaacgctcg cgtgcggccg ggagggtcgc gcgcttggcg
     9721 agctcgtcgg ccatgttggc gatgccgaaa tcgttgagcg cgccttccat cgtccacgac
     9781 atgccctcgt gcacgtcggc actggcatag ccgcggaagg tcgaacgctg catgcccttg
     9841 cggccgacgt gacggtccgg cggtaccacg gtcgcgttct tcaacgcggc ggcataggcc
     9901 tcggccggat cgaagccgcc gatgcccttc agccacgcgt cggcgaaggc cacgtcggag
     9961 ctggtaccga ccatcaggtc ggcatagccc ggcgacgacc agcgtgcgat ccagccaccg
    10021 gcgcgatact gctcgatgaa gccctgcacc agctgcccgg catcatcggg cgtgaacagc
    10081 gcataggctg gccacgtggt gcggaaggtg tcccagaaac cgttgttgac gaacaccttg
    10141 ccatcgcgca cggcggcgaa ggtccgggtc gcgctgccgc cggtgttgtc ctcgctggca
    10201 ctggcctggt tggcgtagcg ccagtccggt gcggccgcgc tgcccacatt ctcgtggccg
    10261 gaattgggat acaggaagag ccggtacagg ctggaataca gcgtggtctt ctggtcgtcg
    10321 ctggcatcgc cgatgtcgaa gcgggccagg cgtgcatccc aggcatcctg cgcgcggccg
    10381 gccacgctct ccagcgtatc ggccgcagca atctccagcg ccagattgtg ccgggcctgt
    10441 tccaccgaga tcagcgaggt ggcgatgcgc atgttcaccc gccgctcgct gccggcatcg
    10501 aacttgatgt agccggtggg gcggccggtg tcgatgcggc cgctgctgcg ccacggcttg
    10561 tcgaaacggg ccgccacgta catgcggctg gcgccgttgg acaggccgct gcgcgtatcg
    10621 gtgtagccgg tgagggtctg cgtggcggca tccagggtca gcccaccacg cgcatcaacg
    10681 ttgtcgaaca gcaggttggc gtcgccgtct tcggggaatt cgaagcggaa cagcgctgcg
    10741 tggtcggtcg gcgcgatcga cgctgcgatg ccgttgtcga agcgcacgtc gtaacggtag
    10801 gggcgcgcgc tctcgtggct gcgatcgaac gacagcgcgc gcttgcggcg gtcggcggac
    10861 ggcacgccgc ggttggccga gggcatcacc tggaacgtct ggcgatcgcc catccacggg
    10921 ctgggctggt ggctcagcgc aagcgcctgc agctgcgggc ggttctgcgc atcgttctgc
    10981 tcgttccagc ggtacagcca gttcagcgca ccggcatcgg tcaccggggt ccagaagttg
    11041 aatccgtgcg gcactgccgt ggccgggaaa ttgttgccgc gcgagaaggt gccgttggcc
    11101 tgggtgccgc gggtggtcag cacccaatcg gaagcccgct gtggctgagg gcgtggctgc
    11161 aggtccaggc gcacgtcgtc gatccagccg gagaccggtg caccctcggc actggccacc
    11221 tccagttcga tcgccaccac gcgacgcccc ttcagcgcgg gtacctcgcc caggcgtatc
    11281 gccttgcgcg cccactgctg cggatacagc gtcttcgacg cgccctgcgc gcgcgcgccg
    11341 atggccacgc catgctggtc gcgtgcagcg ctggacgaca cgcggctgcc atcgtccagc
    11401 agcaggtcca gcgagacata ggtcgaggcc acggtgtcct tgccgacgat ttccggcagc
    11461 accagccatg acagggtggt ttcggcttcg atgggcagat cggtcctgaa cagctcgcgc
    11521 cgcgcgctgc cgccgttgct gctgtagcgc agtgcatgca ggccgctgta gccggcattg
    11581 cgcttggcgg cgtagggcgc ggcgggaccg tcgccgatcg acacctgcaa cccacccgcc
    11641 gccggggtcg gggccggttc acccggttcg aacgaagtct gcagcccctg tgccaacacc
    11701 ggcatcgcgg tagtcgcaca ggccagggcc agggcgagcg gaagcagggc gcggcgtgga
    11761 tcggacaggg tcatgcaggg atctcccgga agggctggcg gcgggcagaa cccgcatcgg
    11821 cgggcaccac ggacagcatc gctccgcccg ccgggatggc agtgggagag gcgatgccgg
    11881 tccggtgggg gcgggccatg cgatcgggtc gaagagggca ggtcgggtcg agacctggcc
    11941 cgatcctgca acagccgccg cgacctgaca agtgccattt agttcgatcc aaatgcggga
    12001 aatagtgcgg tcggcaggtt tccggcgcga acccgccgga tcgattgaag aaatcgccct
    12061 gccgatccgg cctgcgcagg ggcggcacaa tgtcggggcg gcccggatgc tagaatcaca
    12121 gccctcgcaa cccgttcatc gacatccgcc atgagccata ccgccaccgc gcccgccaac
    12181 gccgagaagc gctacaccgt gcaccgcagc gatctgccgc tgagctgccc gaccccggaa
    12241 atggcgctgt ggaactcgca tccgcgcgtg tacctgccga tcgaagacga gcccaacggc
    12301 gaagcgcagt gcccgtactg cggttccgtg ttcgtgctgg ccgactaagc ggccgcccct
    12361 tcgatgcgcc gattgaccgt ggtgcagttg ctgccggcgc tgcactccgg cggtgtcgag
    12421 cgctcgaccc tggaaattgc tgcggccctg gtcgccgccg gccatcgcgc gctggtggtt
    12481 tctgctggtg gccgcctggt gcagccgctg ctggacagcg gtgccgagca cctcaccctc
    12541 gacatcggcc gcaagtcgct gctgaccctg cggcatctgc cgaccctgcg gcgcctgttt
    12601 gccgaggtcg gcgccgacat cgtgcatgcc cgttcgcggc tgccggcctg gctgggcctg
    12661 tacgcgatcc gcgccatgcc cgccgcacag cgcccgcact gggtcaccac cgtgcacggg
    12721 ctgaactcac ccagtcgcta cagcgcagtg atgaccagcg gcgagcgcgt gatctgcgta
    12781 tccaacagcg tacgtgacta cgtgcgccgg cattacccga cggtccccga agcgacgctg
    12841 caggtgatcc cgcgcggcgt cgacgtcgcc cagttcccgc gcgtggcgcg cgccgaccgc
    12901 cggccgcgcc tggcgctggc ggccgatcat ccgtggctgg cgcaggtgga aggcccgctg
    12961 ctgctgctgc cggggcgggg cacccgcctg aagggccacg cccatgcgct gcagctgctg
    13021 tccgacgtgc gcgccgccgg tgtgccggcc cagctgtgga tgctgggcac cgatgaaccg
    13081 ggccgcgaag cctatgtggc ggatctgcgc cggcaggcga cggcgctggg cgtggccgag
    13141 gccgtgcaga tcagcgcgcc caccgcacgc attgcccagg cctatgccgc cagtgacctg
    13201 gtgctgcagc tgtcggacaa accggaagcc tttggccgca ccgtggtcga ggcgctgtcg
    13261 gtcggccgcc cggtgctggg ctgggaccat ggcggcgtgg gtgaactgct gcagcaactg
    13321 caacccgcgg gcgccgtacc gttgggtgat gcgcgggcac tgggtgaacg cgcgctggcc
    13381 ctgctggcgc agccgccgtc cctgccggcg cgcatcccgt ttaccctgca ggccatgcag
    13441 cgtgacaccc ttcgcctcta tgccgacctt gccggctgac gccaccgttc ccctgcgcga
    13501 cgaccgcgcc gggcgctggg caccctggtg ggtgctggcg tacgtggcga tgtggccgct
    13561 gccgggcatc gccgaaaccg tgctcggact gggcgcgctg tacgccgccg cgcgcatggt
    13621 catgcgccgc ctgcagcgcc gtccgcacct gctgagcacg gcggcctggg cgctgacctc
    13681 gatcctgttc cttggctact ggctgccgca ggcgttctcg gccatcgatg ccatcgatcc
    13741 tgcagcgtcg tggaccaagg cggccgccgg cctgcgctat cttcctttca tgtggctggt
    13801 ggcaatcgcc gtagccacgc ccgaacggcg aaggctgacc ttcggtggcc tggcactgat
    13861 cacgggtgca tggacgctgg atgcactggt acaggccgtg gccggtacca gcccatggtt
    13921 ctggtcgctg gaacacctga agctggccgt gagcggccac gcgttgtgcc cggcggacga
    13981 agccgccctg gctgaccggc tcagtggggc cctggggccc tgcaacctca agttcggcca
    14041 ggtgctggcc agcctgtcac cgttcctgtt gttaccgatc gcgcggcgct tcggcaatgc
    14101 gggctggttg ctggcggccg ccgcgcttgg cggcgtgctg ctgctggcag ggtcgcgtgc
    14161 ctcgtggatc acgttcgcac tggtgctggc ctacagtggc gtgcgccagt tcggctggaa
    14221 gcggctggcg ttgctggcgc tgcttgcggt gctggcagcc ggcgcgttga ccgccagcgt
    14281 gccgcaactg cgcgaacgct tcgcgcgtac ggcgatggcc tgggagggcg gcgaacgcgg
    14341 tgtcgaccag gcgctgtccg ggcgtgcacg gatctggcag gccgccgtgt gcatgattga
    14401 agaacatccg atcaacggtg tcggcgcacg cggcttccgc gatgcctatc cggcctgcgt
    14461 cgccgatgag gggccggcgg tctggggtaa tgcgcctgcg ctgcatgccc atcagatcgt
    14521 gctggaaatc ctcgctgaaa ccggcgtgct cggtctgctg ctgtggttgg cggcggtggc
    14581 ccaggcctgg cgcgcatggc gctatgcgcc ggccagcgcg cgtgagcgcg cgcgcccggc
    14641 gatgctggcg ctggcggtca cggtgtttcc gctcaacacc cacctggcgt tctactcggc
    14701 gttctggggc ggcctgacgg tgatgctggc agcgctgttc gccggcagcc tgctggcgcg
    14761 cgaggcagag gattcgccgc cgatacggta gttgccaacc ttggttggcc atccccaggt
    14821 cgagggtcag atcatcggcg ccaaccaagg ttggcgacta cctcgcgcat gcagacgccc
    14881 agcagtccgg tcgatgtcag ccctggctgg caccggctgc cacatccagc taattgtaga
    14941 aatcgctccg cccgcccggt tggcgcttga aacggcgatg gatccacagg tactggtcgg
    15001 gggcctcgcg caccatcgct tcgatggcct ggttgacccg ggtggtatcg gcttccacgt
    15061 cttcgctggg gaagttttcc agcggtgcgc cgatcttcag gaagtacttc ccgccttcgc
    15121 ggcggtggaa gtacgggatc accgcgcagc cggtcatccg cgccagctgg tgggtggcgg
    15181 tgatggtgga cgcggtgtgg ccgaagaacg gcacgaacac ggtgtccttg ccgcgcatgt
    15241 cctggtccgg cgcgtaccag aggaagccgc ccttcttcag gtgccgcaca gtggcgcgga
    15301 tgtcttcgtt ggcatacatc gccttggcgt agcgcaggcg gccgaacttc accgcccact
    15361 cgtacaccgg gttcttgtgc ttgcggtaca tgcccgacag gtcgacgtag tcgcacagca
    15421 ggcggccgca catctccagg gtcatgaagt ggccggagac cagcagcacg ccgcggcctt
    15481 cggcctgcat ccgctgcaga tgttccaggc cctcgatctg cacctgcggg cggatgcggt
    15541 cgatgctgcc ccaccaggcg cggatgcatt cgaacacgcc cacgcccagt gcatcgaagc
    15601 tgtcgcgtac caggcgctgg cgccaggcct cgtccttttc cgggaagcac agctgcaggt
    15661 tgacctcggc ggcgcggcgg cggctgccga gcaggcgcca gctgatccag ccgacgccac
    15721 ggcccagcgc gcgctgcagc atccacggca ggcgggcgat ggcgaaggcg ccgaacatga
    15781 cggcgaacat cggccagttg cggggatcgc gcagcgacgg gcggacggca gtggaggcat
    15841 cggacattgc tccattctac caacccggcc gcgtgtcttt cccgggggcc tcccgtatcc
    15901 ttgccgcatg cgcaaagacc ctgtcgaatg gatcctgcgc ggcctgtatt cggccgtgct
    15961 ttacctgctg ctgccgatca ccgtgtacca cctggtctgg cgcggtttcc gggtccgtga
    16021 atacttccgg cgctgggacg agcgctacgc ctcctaccca cagccgaccg gccagccgcg
    16081 ggtctggctg catgcggtgt cggtgggcga ggtcaatgcc gccgccccgc tggtgaacgc
    16141 cctgcgccag caacgtccgg atatccgctg ggtcatcacc accatcaccc cgaccgggtc
    16201 cgaacgcgtg cgcgcgctgt ggggcgacgc gctcgaccat gtctacctgc cgtacgacgt
    16261 gcccggcagc gtcaaccgct tcctcggcca cttccggccc agcctggcgc tgatcctgga
    16321 gaccgagctg tggccgaaca tgctgttcgg ttgccgcgat cgccgcattc cggtctacat
    16381 cctcaatgct cgcctgtcgg cccgctcgct gcgtggctac cggttgctgg cagcgctgat
    16441 ccgtcgcgcc ctgcgcacgg ttacctgcgt cgccgcacag tcgcaggatg atgccgagcg
    16501 tttcgtgcag ctgggcgcgg cccccgagca ggtgcaggcg ctgggcaacc tgaagttcga
    16561 catcgccacg ccggacgtac aggacttcgt cgcgcagttc catgcgcagg tacccgctgg
    16621 acgcccggtg tggatcgccg ccagcaccca tgacggtgag gagcaggcgg tgatcgacct
    16681 gcaccgtcgc ctgcgccagc agcatcccga cctgctgctg ctgtgggcgc cgcgccatcc
    16741 cgagcgcttc ccgaaggtgg aggccctggc gcgcgagcag ggctggaatg tggcgacccg
    16801 gcgtgcgatg cagtggccgg acgccggcac cgatgtgttc gtcatcgaca ccctgggtga
    16861 actgatgccg ttctatgcct gtgcgcaggt ggcgttcgtc ggcggcagcc tgcaatcgat
    16921 cggtggccac aacctgctgg aaccggcggc gatgggcacc gccgcggtga ccggcccgca
    16981 cctgcacaac ttctccgaga tctcacgacg catgcgcgag gccggtgccc tgctgatcgg
    17041 cgaggacgtg ccggcggttg gcgatctgct gcagcacctg cttgatgacg aacgtgcacg
    17101 cgaggacatg gcgcgcgccg gctgcaccct ggtcagcaac ggtcgcggcg cgttgcagcg
    17161 tacgctggcg ctggtggccc cccacctgcc tcctccgcgc agctgaggcc gcaggggatt
    17221 cgatccacgt actgcggatc gaatgacgtg atcgcctgca tcaattctgc ttaacggcga
    17281 gattcctgtc gttgcaggac cgtggaacgg tgtgccgacg tgcctgcgat cacaatgcgg
    17341 cgtgcacgcc acggattctg gtatcgccct tcgccgcagg ctgccagcct gctgtcgaac
    17401 gtgcttgggc ggatatcaag gaaccttgcg atggatagcg acagcggccc gggcgacatg
    17461 ggcgatgcag ggccgggcag ggaccacctt gcaggggtga tcctgaccct gatgctgggt
    17521 ggcagcgtga ttgcgctggt ggggcagcac accgccgcac aggcaggccc tgcgatcgtg
    17581 ttgagcctgt tgctggctgc gctgggcacc gcgccgctgc tgtattgcct gcacatcctg
    17641 ggccggcagc tgccggtggc cgagggcctg cacggcctgc tgcgggcgcg ttggggcagg
    17701 gtcccggccg gcctgctctg cgccgcgctg ctggtggaac tgatggcgac cagcgccggc
    17761 gtggcgcagt ccatggccag ccacgtgcat gcgctgctgg ccagctgtgg catcgaggcc
    17821 ggtaacgcga tgccggttgc gctgatggcc acccttggcc tgcttctgct tgggctgatc
    17881 ggattgctgc caccgaggcg tggggcgctg gtggcctgtg cgttgctgac ggtgaagctg
    17941 ggcaccggcc tgttgctgct ggtgctggcg gcccgccatg tgcactacgc gctctggata
    18001 ccgtggctgc cggaggccac ggcgccctat cgcttcgggc caggaggagt gctggcagcc
    18061 agcgtgccgc tgctcggcat gtttgcctgt gccggcctgg tgctgggatt tcccggcgtg
    18121 tgtggccagg tgcggacgcg acaggcagcg ttgctggcga gcacgctgct gctggccatg
    18181 ctgctgctga tcgtgctggc cgcgttgcag tccggcctgg tcgagtttcc ggccttggcc
    18241 agtacgcggc cgttgtcggt ggcattgcag cagcacccgc aactgcagtg gatgatgccg
    18301 ctgctgccac tggcgggggc gagcgggttg gcggcactcc tgctggtgct gctgcgggtg
    18361 gctgcgcggt tggcaacgca gttgtggacg gcggcccgcg atgcatcgca tgggcgtgtt
    18421 gcgccgccga tgccggtcgc ggtggtgctg gccgcggcgc tgctggcgct ggcgatgccg
    18481 atgggcacat tgccggtgct gcctgggccg gcaaccctgc tggtgatggc ggcgctgtgc
    18541 ctggctgccc tgcgcgcgca ggttccgcta ccacgcgccc tgccggtgct ggcccccctg
    18601 gccgccgcgc tgtgcctgtt ggccgccgcg gaacggatgc gtgcgtggcc cggctgacga
    18661 ccaggcaagc ctcccatgcg tggaggcttc ggcctgcgtc gcgcataaaa aaaagccacc
    18721 ctcgcgggtg gcttcttcgt tgccggcagg gcggcgactc agtgcgtggt cgttgccggg
    18781 ttgcctgcgt cctgggtcag caggcggttg acgtcctgca gctcggccac atccagtgcg
    18841 cccagcgact ggctcagcag caggcggttc tgcaggaagg tgtagcgggc gttggcgtaa
    18901 tccagctgcg ccgagaacag gatgcgctgg ttctggatca cgtccagcac ggtacgggta
    18961 ccgacttcca ggccaacctg cgaggcgtcg tacgcgctct gcgccgagac caccgccagg
    19021 cggcgggctt ccacttcgct gatgccctgc accagggtct ggtaggcgtt gcgggtgttg
    19081 cggtccaggg cacgcttctg ctgttcgtag ccgtcctggg cgatgtcacg ctgggccagc
    19141 gcctggcgca cgccggactg ggtggcaccg ccggagaaga tcggcacgct cagggtcagg
    19201 ccgatgctgt tggtgcgtgc gtccggcgac agcgagccgg caccggtgct gtcaccccag
    19261 gtcgcgctct tgccccagct gccgcccagc gacagggtcg ggtaatggcc accgcgggcg
    19321 gcctgcacgc tggcttcggc ggcactgacc ttcagttcct gcgccttcag cgccggattc
    19381 tggttggtcg cctggtgcac cagttcgtcg atgttgccgc ggttggccgg cacttccggg
    19441 cggaagtccg ccggcaggcc acgcaggttg accaccggct ggccggtcag ttcggtcagg
    19501 gcctggtagt tatcggccag ggtgttctgc gcaacgatgg tgtttgcgcg cgcctggtcg
    19561 tactgggcgc gtgcttcatg cacgtcggtg attggcgcca ggcccacttc caggcgcttg
    19621 tcggcgaagt cgaactgctt cttcgcggcc gcttcattgg tctgtgcggc gttcagcgat
    19681 tcgatcgcca ccagcacgtt gaagtaggcc gccgaggtgc gcacgatcag gctgtcgttg
    19741 gccgagtcga gggtgaagtc cgccgccttg ctcagttcgc gctgcgaacg caggttgttg
    19801 atctgggtcc agttgaacag cgtctggctg ccgtcgatcg tgtagttgcg gcgcttgctg
    19861 gtgaccgtgc cggagttggc gtcatggtcg gcttcgctgc gcgagcggtt cagcgtggcc
    19921 tggccattga tctgcggcag cagggcggcg cgcgcctgca cggcgccttc cttgtcgacc
    19981 agccgggtcg attcggcggc ggacagctgc ggatcgccgt tgcgcgccat ctcgtagacc
    20041 tgcagcaggt cggcggcatg ggcggacaac ggcagcaggg cagtggccag cgcaacagcg
    20101 agggatcggc ggatcattgc ggcttccttg gactcagagg tggaactggg gtgccggggc
    20161 ggcaccgcgc aggtaatcga tatcggtttc gaacagcgat tcggtgctgc cgtcggcctt
    20221 gaccagcagg gcctccatcg ccggcgagcg gccctggatc acgaacaggc ggccacccgg
    20281 acgcagccac gaggcgaact gtgacggcac cacgtcgacc gcaccagtga cacagatcac
    20341 gtcaaaacgg cgttcggtct gccaggacag ggcgtcggcc acttccacac ggacattggt
    20401 gcccaggccg gaggcgtcca gacgggcgcg tgcggcggcg gccagttccg ggtcgatctc
    20461 caggctcagc acgtcgcgcg ccagcgcgcc gatgcaggca gccaggaagc cgctgccggt
    20521 gccgatctcc agcacttcgt cacccggctg caggtccagt gcctgcaggg tacggccctc
    20581 gatgaccggc ttcatcatct tctggccatg gccgatcggc agttcgacgt cggcgtaggc
    20641 cagcgcccgg tgcgcgtcgg cgacaaaggc ctcgcgcggc aggcgggcga ggacgtcgag
    20701 caccttgatg tccagcacgt cccagggacg gatctgctgt tccaccatca gttcgcgggc
    20761 gtgggcgtaa tcaatcgtca tgaggttcaa atccagcgca gtgggccggc cattttaccg
    20821 gtgccggagg ccggcggcgc gcccagagca tcagctgccg ggtggccggg gtcgcagtgc
    20881 cggaagtcat cgcgacctcc ggttcgttca gttttggtta tccggccgtc ccggcccctc
    20941 gcggcgcata ggcgcgcagg aagaagtcga tgctggcggt cacgtgggtc agagggtcgc
    21001 actccaccgg tgacagtggc atgccgcaca tcatatgcat gtgcacttcg cccttcacca
    21061 gggtcaggaa ctgctggccg gcgagatagt aatcggcaat ctccagctcg ccgcgttcgc
    21121 cgcgcgcgcg caggaagtcg gccagggccg cgcaggtacg ttccgggccg gcctgccaga
    21181 acagctcgcg caggcgttca tcggtttccg gggccatcat catgcgctgg atcgagatcg
    21241 ccgcatcgga ggtgatcagc tcgaagaagg ccaggccgat gccgatcagc tggtcgcgca
    21301 gcgggccgtc cgcgtcggcc acgaacaggg cgtcgggcag catttcaatg catttggact
    21361 gcacggcctc ggagaacagg gtctccttgt cgccgaaatg gctgtacacg gtcagcttcg
    21421 agacgccggc ctgagcagcg atggcgtcca tgctcacgcc ggtatagccc tgttcgatga
    21481 acagtgcctt ggctgcttca aggatcgccg cgcgcttgcc gagatccttg gggcgcccgg
    21541 gtccggcggc cttggcagca ggcttggccg acggcttgcg ggaagtagga gaactcatcg
    21601 caacaatact agaccaagcg gttcgatatt tatactatac cgaccggttt attaaattgg
    21661 gccggcagtc gcggctcccc ccttgttgga ccctgcgttt tcaggacgtt gaccgatgaa
    21721 gatcgtgcgc tggatgggcg gtatggtgtg ggtggctgcg ctggcagcct gttcgggaca
    21781 ggaacaggcg ccgcaggcgg ccgtgccggt gctggtggtt caccctggcg agcaggccgg
    21841 gcaggcgcct gcggcgttcc cgggcacggt gcgcgcacgc caggaaagcc cgctgtcgtt
    21901 ccgcgtcggc ggcaacctgg tcaagcgcca cgtcgatgcc ggccagcggg tgaagaaggg
    21961 cgacgcgctg gccgagctgg acgtggccga cttcgcgctg caggcccgcg cttcgcaggc
    22021 ccagctggcc gcggccgagg ccgacctggt gcgcgcccgc gacgacctca agcgctatca
    22081 ggtgctggcc gaccagcagc tggtcagccg ctcgcagctg gaccagcagt ctgccgcgtt
    22141 caaggccgcg cagggccagg ccaatgcggc gcgtgccaac ctcgatgtgc tgcgcaacca
    22201 ggccgattac gcgcagctgc gtgcaccggc cgacggcgtg atcgccagcc gcgaggccga
    22261 agccgggcag gtggtgtccg ccggccagac cattttcaac ctggccgccg acggtggccg
    22321 cgaagtgctg atcgacctgc ccgaagccac catccgcgat tacgcggtcg gccagccggt
    22381 cgaggtggaa ctgtggaacc gtccgggcca gcgcctgcca ggcacgatcc gcgagattgc
    22441 cgccgctgcc gatccgcagg cacggaccta tgcgacccgg gtcagcctgg cggccgatgc
    22501 actggctgat gtggagctgg gccagagcgc acgtgtctac agcagcgccg gccgccacgg
    22561 caccctgcag ctgccgctgg gcgcgctgca acgcggtgcc aacggtgccg ccagcgtgtg
    22621 ggtggtcgat ccggccaaca gcacgctgaa ggctgcggcg gtcaccaccg gtgcctacgg
    22681 cagcgagacg gtgccggtgc tcacgggcgt tggcgcaggc gactgggtgg tcgccgccgg
    22741 tggccatctg ctgcgtgccg gccagccggt gatcgccgtg gaccggcaga accgcccggt
    22801 gctgaagccg gccgcgccgg ccgccgccgc caaggccaag gagtaagccg gtgcgccgct
    22861 tcaatctttc cgagtgggcg ttggccaacc gtccactggt gctgtttgcg atgctcgcct
    22921 tcgcgctgat cggcgcgtgg tcatacaagc acctgggcca gtccgaggat ccgccgttca
    22981 ccttcaaggc gatggtggtg cgcacgctgt ggccgggtgc caccgccgag caggtctcgc
    23041 ggcaggtgac cgagccgatc gagaaggcgc tgatgaacac cggcgagtac gagttcatcc
    23101 gctcgtactc gcgcccgggc gaatcgcagg tgatcttcat ggcccgcgac agcctgcgtt
    23161 cccggcagat tccggacctg tggtaccagg tgcgcaagcg cgtgggcgac atccgggcga
    23221 cgctgccgcg cgagatcgtc ggcccgttct tcaacgatga gttcggcgac acctacggca
    23281 acatctacgc gctgaccggc aagggattcg actacgcggt gatgcgtgac tacgccgacc
    23341 gcatccagct ggaactgcag cgcgtgccgg acgtcggcaa gatcgacctg gtcggcctgc
    23401 aggacgagaa ggtgtggatc gagttgtcca acacccgcct ggccacgctg ggcgtgtcga
    23461 tgcagcaggt gcagcaggcg ctggccgacc agaacgcggt caccggcacc agcttcttcg
    23521 agaccgccac cgaccgcgtg cagctgcgcg tgaccggaca gttcaacgat atcgaggcga
    23581 tccgccagtt cccgatccgc gccggcgacc gcaccgtgca cctgggtgac atcgccgagg
    23641 tgaagcgcgg cttcgctgat ccggcctcgc cgaagatgcg cttcatgggc gaagaggcga
    23701 tcggcctggc ggtggcaatg aaggacggcg gtgacatcct caagctcggt gccaacctcg
    23761 atgccgagtt cgagcgcctg cagaaaaccc tgccggcggg catgcagctg cgcaaggtgt
    23821 ccgaccagcc gcaatcggtg gaggagtcgg tcggcgagtt cgtgcaggtg ctgaccgagg
    23881 cggtggtgat cgtgctgctg gtcagcttct tctcgctggg cctgcgtacc ggcctggtgg
    23941 tgggcgtgac cattccgctg gtgctggcga tgaccttctt cgtcatgcac tacttcgaca
    24001 tcggcctgca caagatctcg ctgggcgcgc tggtgctggc actgggcctg ctggtggacg
    24061 atgcgatcat cgcggtggag atgatggcca ccaagatgga acagggctac gaccgcctgc
    24121 gcgcggccag cttcgcctgg gagtcaaccg cgttcccgat gctgaccggt accctgatca
    24181 ccgcggccgg cttcctgccg atcgccacgg cggcatcgag caccggtgag tacacccgct
    24241 cgctgttcca ggtggtgacc atcgcgctgg tggtgtcgtg gatcgcagcg gtgctgttca
    24301 tcccgtacct gggcgacaag atgctgccgg acctgttcaa tccgcagccg cccaagccgg
    24361 gcagcctgtc cgcgcgctgg catgccaggc gccagcagtg ggccgaccgc tacccggcgc
    24421 tggccaacct gatcgcgcca ccgcagcacg ggcacgacca tgacccgtac cagcgcccgt
    24481 tctaccgcag cttccgtcgc ttcctcgacg cctgcctgcg tcgtcgctgg tgggtgatcg
    24541 ccgcgaccat cgccctgttc gtgttctcgc tgatgatgtt ccgcttcgtg ccgcagcagt
    24601 tcttcccgga ttcgacccgg ccggagctga tggtggacat cgagctggcc gagggcgcgt
    24661 cgctgcgctc gacccaggcc caggccgaga agctggaaaa gctgctgtcc agccgcgacg
    24721 gcatcgccaa ctacgtgtcc tatgtcggca ccggttcgcc gcgcttctac ctgccgctgg
    24781 accagcagct gccggcgacc aacttcgccc agttcgtggt gctggccaag gacatcaagt
    24841 cgcgcgaaag cacccgcgac tggctgctgc acgaggtgat cccgaagttc ccggatgtgc
    24901 agatgcgcgt gacccgcctg gagaacggcc cgccggtcgg ctacccggtg cagatgcgca
    24961 tttccggcga gcacatcgag agggtgcagg cgatcgcgcg ccaagtcgag gccaaggtgc
    25021 gtgagaaccc gcatgtgatg aacgtcaacc tggactggag cgagccgagc aaggtggtgc
    25081 ggctggtgat cgaccaggag cgtgcccgcg cgctgggcgt gagcagtgcc caggtcagcc
    25141 agttcctgtc cagttcactg gccgggcaat cggtgagcgt gtaccgcgaa ggcaaccgcc
    25201 agatcgagat gctgctgcgt ggtccggccg atgagcgcaa ccagctggaa ctgctgtcga
    25261 gcctgtcgat gcccaccgcc aacggcggca gcatcacgct gtcgcaggtg gcgacgatgg
    25321 agtacggctt cgaggacggc atcatctggc atcgcaaccg actgccgacg gtgaccgtgc
    25381 gcgccgacat cagcgatggc atgcagccgc tggacgtggt gcaccagatc ctgccgacgc
    25441 tggacggcat ccgcgccgaa ctgcccagtg gctacctgct ggaaaccggc ggcacggtcg
    25501 aggattcggc ccgcggccag aactcgatca aggccggcat gccgctgttc ctggtggtgg
    25561 tggcgacgct gctgatgctg cagctgcgca gcttctcgcg cgcagcgatg gtgctggtga
    25621 ccgcgccgct gggcatcatc ggtgcgaccc tgttcctgct gctgttccgc gcgccgttcg
    25681 gcttcgtggc actgctgggc acgatcgcac tggccggcat gatcatgcgc aactcggtga
    25741 tcctgatcga ccagatccag caggacatcg acgccggcca tgaccgctgg cattcgatca
    25801 tcgatgccac ggtgcgccgc ttccgcccga tcgtgctgac cgcgctggct gccgtgctgg
    25861 cgatgattcc gctgtcgcgc agtgcgttct atggctcgat ggcgatctcg atcatgggcg
    25921 gcctgatcgt gggaacggtg ctgaccctgg tattcctgcc tgcgttgtat gcggcgtggt
    25981 tccgggtcaa gccggacgaa tccggggcgt gatgccccgg gttctgcggc tgcacccgtc
    26041 cacgcatggc gtggatggat ctgcttgcgg gatctgcttt ctgtagagcc gagccatgct
    26101 cggctgctct tcgcgcgatg atgggatgag tcgagcatgg ctcgactcta cagaagcatc
    26161 cacgcatggc gtggatctac tgcagctgca gtccggtgcg cagcaatggc aacaaccact
    26221 cgatgaacac ccgcacgcgg tgtgcgcgat gctgccggtg cggctgcagc agggttaccg
    26281 gcagcggctg cgcgacgtgc tgcggcagca cttccaccaa tgcgcctgat tgcagttcgg
    26341 cctgcacgtc gtagcgcgga atctgcagca gcccgagccc agccacgcag caggcaatcg
    26401 acgcctcggc gctgttcacc cgcacccagc ctggcatcgg tagcgtgtgc agctggctgc
    26461 cgtcctgcca ctcccacgct tccacccgcg ccgtggtcgg cgaagcgtag ttcaccgcgc
    26521 ggtgctgctg cagatcggca ggatgctgcg gtacgccgtg ctcgcgcaga taggccggtg
    26581 cggcaacgtt gacgaaatcg agctggccca gggagcgggc caccagactg gagtcgctca
    26641 gctggccgac gcgcagtacg gcatcgcagc catcttcgat caggttcacc gcacggtcgg
    26701 tcatgcccag gtccagctcc acctgcgggt agcgtgcaaa gaagtcgggc agggccgggg
    26761 cgaggatgcg gcggccgatg cggctgggca cgtcgatctt cagcagtccc accggctgcg
    26821 cgtcgtcctg gcggaacaat gactcggcgt cctcgacctc ggcaatcagg cgcaggcaac
    26881 gggcatggaa cacgtcgcca tcgtgggtgg tggagaccct gcgggtcgaa cgctgcagca
    26941 ggcgggtgcc cagccgctgt tcaagttcag cgatggccgc tgacaccgtc gaacggggca
    27001 ggccgagctg gtcggcggcg cgcgtgaagc tggcgcactc cacgacccgg gtgaagatgc
    27061 ggaagcgatc gatccggtcc attgttcgct ggctctggaa agttaagtca atgtggcggg
    27121 ctttatccgc gttttctgca cgatatcgtc gtcagggcag ggttgccacc ccgggcagcc
    27181 ccctcccgag accaacgcca tgaccgacca ttccctcaag ggcaagaccg tgctgattgc
    27241 cggtggcgcc aagaacctgg gcggcctgct ggcccgcgac tttgctgcgc aaggggccag
    27301 ggccatcgtc atccattaca acagcgccgc cacccaggcc gatgccgaag ccaccgttgc
    27361 cgccgtgcag gccgctggca gcacggccgt cgccctgcag ggagacctga cctcggccgc
    27421 ggcgatggag cgcttgttcg ccgatgcggt ggcagctgtc ggtcgtcccg acatcgccat
    27481 caacacggtc ggcaaggtgc tgaaaaagcc gctgctggag atcagcgaag cggagtacga
    27541 cgagatgagc gcggtcaatg ccaaggccgc gttcttcttc ctcaaggagg ccggtcgcca
    27601 cgtcaatgat ggtggtcgca tctgcaccct ggtgacctcg ctgctgggtg cgttcacccc
    27661 gttctattcc agctatgccg gtaccaaggc gccggtggaa cacttcaccc gcgcagcgtc
    27721 gaaggaattc ggcgagcgcg gcatctcggt gaccgcgatc ggtcccggtc cgatggatac
    27781 gccgttcttc tacccggccg agagtgccga tgcgcaggcg taccacaaga ccgcggcggc
    27841 gctgtcggca ttcacccgca ctggcctgac cgacatcgcc gacatcgtgc cgtggatccg
    27901 cttcctggtc accgatggct ggtggatgac tggccagact atcctggtca atggcggtta
    27961 caccaccaag tagaggcgaa tcacgcgcga ttgcggcgga cctgaagcgt cgtgccatgc
    28021 tcgacgcttc atcctgcagg ccgtccacgg gcacaatagc cggctgtcct gggcccggag
    28081 tgccagcatg ttccctcgca cgttccatgc tttcacgttg atgttgattg cctccagcag
    28141 cgttgccgat gcaacgcccg caggaaccga tgcccagcag ttccagcaga acctgatcgc
    28201 agtgctggaa tgccgcgcga cacctgcggt gcggcaggca ctgggcagcc agctacgggc
    28261 cgtccgctat ggctctgcaa cggaacggcc ggcacacctg cgtggctggc gcttcatcgc
    28321 agccgatcac cccgggatcg agagcgcggc cacgcgcatc gaactgcctg cgcccatcac
    28381 cgccaacggc atcaccaccc gcgagctgct ggccgatgac ctcggtttgg gcatgtccct
    28441 cgatgcggtg cagcgtgagc gcatcgtggc cgaggacggc atgcagatgc ggatcagcac
    28501 gctgcacgag ccgttccggg cctggtggcg accagcgtcg gacgttgctg cggcggcaca
    28561 ggcctggcgg gtgatacgaa gcgagggcgc aggcaaccgc ctgtcgtgtg attaccggga
    28621 gcgatatcag aaactggacg accagcaggc ggccgaccgc ctgcgcgagg acctggtagc
    28681 ggttctggag tgccgcgcgg acgtggcggc ctggcagcgc tttggcgaat tctggacgcg
    28741 tgtcagcgcg cacagcccgc ttgggtggcc ggcgcaggta cgcgcgctgg atgcacctgc
    28801 atgcatggcc cgcgaaggcg gctcccgttg tgagcggata acgctcgatg cgccgatcac
    28861 cgtgcatggc ctggccgtgt cgtcggtgat gatcgagccc agttacgcgt caggccatgt
    28921 tgcagcggac ctgggcgtgg tgcccgtcga cgatgcactt aaggctgcga ttccaggtgc
    28981 tacggcggcc ggggaaatca tctggaccct gccggcagca cctctgcagg aacggccgcg
    29041 cgagcgcttc gtggtgcgca ccgacgatgg gcgcaccttg atggggtgtg cgacgtccaa
    29101 ggcgatccac agcggacggt agcccgacgc gtgcacgccg gtgccgggca gtgcccggca
    29161 ccgtcatgca tcagcccagc ttcgccagca ccgcatccgt cgcggcggcg gtgctcaccg
    29221 cctggccctt ggcggccagg tcggcggtga acacgccctc gtccagcacg gcatgcaccg
    29281 cggcttccac cgccgcggct tcgacgtcca gccccagcga atggcgcaac agcatcgccg
    29341 cgctgaagat cgtcgcgtac gggttggcga tgcccttgcc ggcgatgtcc ggggccgagc
    29401 cgtggatcgg ctcgtagatg ccgaccgcgc ccggttcgcc cagcgacgcc gacggcagca
    29461 ggcccagcga accggccagc atcgaggcct catcggtgag gatgtcgccg aacatgttct
    29521 cggtgacgat cacgtcgtac tcgcgcggct tggccagcag gtgcatggcc atcgaatcaa
    29581 ccagctggtg ttccagtgcc acgtccggga actcctcgcg gccgatgcgt gcggccacgt
    29641 cacgccacag gcgcgaggtt tccagcacgt tcgccttgtc caccgaggtg accttgccac
    29701 ggcgctgctg cgcgaggcgg aaggcactgc gcagcacgcg ctcgatctcg gccacggtgt
    29761 agcggcacag gtcgctggcg ctgtcggcgt cgcgggtctt gtcgccgaag tagatgccgc
    29821 cggtcagttc gcgtaccacc acgaagtcca cgccctgcag cagctcggcc ttgatcggcg
    29881 aggcgtgcag cgccgcctcg tgggtgcgca ccgggcgcag gttggcatac aggcccagcg
    29941 ccttgcggat tgccagcagg ccctgttccg ggcgcaccat ggcgttcggg tcggaccact
    30001 tcgggccacc gaccgcaccc agcagcaccg cgttggcggc ctggcaggcg gccagggtgg
    30061 cggccggcaa gggttcgcca tggcgatcga tggcgatgcc accgatgtcg tgttcgctga
    30121 aagcaaaggt gtggttgaag cgttcggcga tggccttcag gacggcaact gccgcggcgg
    30181 ccacttccgg gccgatgcca tcaccgggca ggacaacaat ttcagcgtgc atgctcactc
    30241 tcgtaacgtt cgatttcagg gacacggccc aacagatacc ccaactggtc gacaccttcc
    30301 agcaggcagg tctgcgagaa gccatccagc gggaaggaat agacgcggcc atccggggtg
    30361 cgcagttcgc gcgcggccac gtcgatggtc agctcatcgt ccgggtgctg catcagcgcc
    30421 tgcacgtcgg cttcgtccag cacgatcggc agcaggccgt tcttcagcga gttgccgcgg
    30481 aagatgtcgg cgatctcgct gctgacgatg gcgcgcaggc cgaggtcggt cagcgcccac
    30541 ggtgcgtgct cgcgcgagga accgcagccg aagttgcggc ccgccagcag gatgctgcgg
    30601 ccggcgttgt gcggctggtt gaacgcgaag tcggccaccg gcgacccatc ggcctgccag
    30661 cgccagtcat tgaacgcatt gcggcccagg ccggcacgtt cggtggtgga caggaaccgc
    30721 gccggaatga tctggtcggt gtcgatgttg gtctggcgca gcaccacgct ggccgagctc
    30781 agggtatgga aaccggccat cacgccacct cctgtgcgaa cagttcgcgg gtatcggcca
    30841 cctggccctt caccgccgcc catgccgcgc tcatcggcga cgccagcaga gtgcgtgaac
    30901 cggggccctg gcggccctcg aagttgcggt tgctggtgct caccgccagc tggcccgggg
    30961 cgaccaggtc accgttcatg gcgatgcaca tcgagcagcc cggctcgcgc cattcggcac
    31021 cggccgcgcg cacgatctca tggatgcctt cggcctcggc ctcgcgcttg acgatctccg
    31081 agcccggcac caccagcatg cgcacgccgt cggcgacgcg gcgtccgcgc agcacctgcg
    31141 ccacttcgcg catgtcactc aggcgaccat tggtgcacga accaacgaac accacatcca
    31201 ccggcgtgcc ggccagcgcc ttgccggcct ggaagtgcat gtagtccagg cccttctgcg
    31261 cggcggcatc gttggcggcc ggaatcggcg catccaccgc gatggcagta cccggatggg
    31321 tgccccaggt cagggtcggg cggatatcgg cggcgtcgat gtgcacttcg ctgtcgaagc
    31381 gtgcgccgtc atcgctgcgc agctgctgcc agcgcgccac ggcggcctcg aagtcggcgc
    31441 ccttggggcc gcgcggggtg ttggcgacga agtcgaaggt gacctggtcc ggcgcgacca
    31501 tgccggcacg cgcgccggcc tcgatcgaca tgttgcacag ggtcatgcgc tgttccatgt
    31561 ccatcgccgt gatggtgctg ccacggaact cgatcacgtg gccggtaccg ccgttgacgc
    31621 caatcacgcc gatgatgtgc aggaccacgt ccttggcgcc gacgccaggt gccagcgggc
    31681 cgtccacggt gatcgcaagg gtcttggcct tgcgctgcag caggcattgc gtggccagca
    31741 cgtggccgac ttcgctggtg ccgatgccga acgccagcga accgaacgca ccatgggtgg
    31801 aggtgtggct gtcaccgcag acgatggtca tgccgggctg ggtgaagccc tgttccggtg
    31861 cgatcacgtg gacgatgccg cggttgtccg aggccatgtc gaacagctcg atgccgtgct
    31921 cggcgcagtt gcgcgccagc gtggcgacct gcgcctcgga ggcggcactg gcgtagggca
    31981 gcgtgccgtc ggcggcagcc ggcagggtcg gcgtggagtg gtccatcgtc gccttggtgc
    32041 ggtccggccg gcgcggcgac aggccgcgct cgcgcagctc ggtgaacgcc tgcggtgacg
    32101 tgacctcatg gatcaggtgc aggtcgatgt acagcacggc gggcgcgctg tcggattcgg
    32161 gaaccaccac gtgggcgtcc cacagtttgt cgtacagggt gcggggtgcg gaagtcatgc
    32221 gtgtgcctgg cagaagtacg aaggtgcgga catcgggaaa gataacgaac ggatcatgtc
    32281 agcggcgacg ggcgagtacc cgcagccgca cgtagtcggc caacggctgg ccggcggcgt
    32341 tgcgcggcag atcggccagc aacgcggtgg cggcctcacg cacaatggcg cgggcctcgg
    32401 cgggcagatc gtccagcaac ggcgcagcga atacccgcaa ccagccggcc acgccggtcg
    32461 gcagcggggt cgggcgcggc gtgcactcga tcagctgcac ctggaagcca tgctggcgca
    32521 ggcggtcggc gtaggcgtcg gcactgggga aataccactg gaaggcgctg gcaccgtggc
    32581 catgcgccac gcgcgcggcc tgcaccgcgg cgatgatcgt ggccacattg ccatggccac
    32641 cgaactcggc aacaaagcgg ccacccgggc gcagggcacg gcgcacgcct tccagaacgc
    32701 ggtccgggcc gcccatccag tgcagagcgg cgttgctgaa gaccgcatcg aactcgctgt
    32761 cgaaggtcag tgcgcggcca tccatcacct gcgcatcgac gccacgcgca cgggccgcga
    32821 tcaccagttc aggcgacgcg tccacgccgt ggatgcgtgc gccgctgagg gccagttcgg
    32881 tgctgagcac gccatcgcca cagcccaggt cgaggatgcg ttcaccggcg cgcgggtcga
    32941 gcaggcgcgc caccgcgccg ccgagcagcg gcacgaagcc ggcgtcgatc gcatagtcct
    33001 gggcgttcca gtgctgccct gcaggcagcg cagtggtgtc gaaggcgctc atggcgggtt
    33061 cctcaggcgg tggcgggggt gggaatgtcg gtgctgctgt gggcggcggc ctggcgctgg
    33121 cgcagcaggc ggttggcaac atccagccag gccagcgcgg aggcttcgat gatgtccttg
    33181 ctggtgccgg tgccgtcgta ctccacgccc tcgtggcgca cgctcaggtt ggcttcgccg
    33241 cgcgcatcgg cgccgatgcc gacgctgtgc acgtggtagc tgtccagcat cagctgcacg
    33301 ccggtggccg ccgacagcgc gccgaacagc gcatcgaccg ggccgtcgcc ctgcgcggtc
    33361 tcggccacgc ggttgccgtc cgggtcggac agttcgacca gcgcgttggc gcggctgccg
    33421 acgtcactga tggtcatcga cgccaggcga tagccctgcg cgttggagcc gccctgcatc
    33481 agcgtctgca ggtcggcatc ggtaaccacg cgctgctgtt cgcacaggcc cttgaactgc
    33541 tcgaacacca gcttcagttc gtcttcgtcc agccagaagc ccagcgcacg caggcgcgct
    33601 tcgacggcgg cgcggccact gtggcggccc agcaccatct gcgagtcttc ccagcccaca
    33661 tcttccgggc gcatgatctc gtaggtgccg cgatggcgca gcatgccgtg ctgatggatg
    33721 cccgattcgt gggcgaaggc gttggcaccg acgatggcct tgttgcgctg caccggcatg
    33781 ccgaccaggc gctgcagcag ctgagaagtg ccgacgatgc gcggggtgtt gatcgcgctg
    33841 tcctgctcgt agaaggcctg gcgcaccttc agcaccatcg cgatctcttc cagcgagcag
    33901 ttgccggcgc gctcgccgat gccattgacg gtgcattcga cctggcgcgc accgccttcg
    33961 atggcggcca gcgagttggc aacggccagg cccaggtcgt tgtggcaatg cgcgctgaag
    34021 atcacgttgg cggcattggg aacgtcggcg acgccggcga tgacctgctg gaacatcgcg
    34081 cggatctctt ccggcgtggt gaagccgacg gtgtcgggca ggttgatggt ggtcgcgccg
    34141 gcagcgatgg ccacgcgcga aacttcaatc aggtagtcca gctcggtgcg ggtggcatcc
    34201 tcggccgaga attcgacatc gtcgatgtac gagcgtgcca gtgatacgtg cttgcgtacc
    34261 gactccagta cctgctcgcg ggtcatccgc agcttgtgct cgcggtgcag cgggctggtc
    34321 gacaggaaca cgtgcaggcg cgggttggca gccgcttcca gtgcgcgtgc cgaggtttcg
    34381 atgtcggcct gcaggcagcg cgacagcacc gccaggctca ggctcgggcg gcgcagttcg
    34441 cggccgatca gggccatcgc ctcacggtcg gactgcgagc tggccgggaa gccggtctcg
    34501 atgatgtcca cgcccagttc gtccagcgca cgcgccatca ccagcttctg cggcgggctc
    34561 atgctgcagc cgggggactg ctcgccgtca cgcagggtgg tgtcgaagat gcggatgcgc
    34621 ggggtggtaa ttcgttcaat ggtggtcaca gggaaatctc ctcgacagcg ggtgcgacgg
    34681 cttgcaggtg ggaaggggaa gaggcagggg atgcgggggc gctggccttg ccgggcgagc
    34741 gcggcgtttc gctgcgccgt cgccgtggct tgcgcggtgg gcgcggacgg atgtcggtga
    34801 gcaggccggc caggacgccg gcatcgatgt tgccgccgga gaccaccgcg cacttgcgac
    34861 ggccggcgac gcggcggccg gcggccagcg ccagcgcacc ggcgccctcg gcgatgatgt
    34921 gttcctccag tgccagccgg accagggttt cgcgcagctc ggcctcgcgc acgatcacca
    34981 cgtcgtccag cagcgaggtg cacagccggc gggtcaggaa gccggggacc ttcacccgta
    35041 cgccatcggc cagcgaagcg gccggggcga tctcgcggac gtcgccacgg atcgcgcgcg
    35101 ccatcgaatc gacgccttcc acctgcgcac ccaccacgcg aacgccctgc gatttcagtg
    35161 ccagcgcgac gccggaggcc aggccgccac cgccgatcgg cacgatcacc acatccggtg
    35221 cgtgtgcggc cagttcgatg ccgaccgtgc cctggccggc gatcacgtcg gcatcgtcga
    35281 acgcggacag gaagcggtag ccgtggcgct gcgccagttc caccgcgaag gcataggcct
    35341 cgtcgtagct gttgccatgc tggcgcacgg tggcgcccca gtgggcgacg ccggcgatct
    35401 tggttgccgg agcgccgtgc ggcatcacgg tgatggcggg cacgtccagg cggtaggcgg
    35461 cccacgccac gccctgggcg tggttgccgg ccgaggcgca gatcaccggc cgggtgtcgc
    35521 cgcgctcgcg gccggccagc agcgcgttca atgcgccgcg taccttgtag gaaccggtgc
    35581 gctgcaggtt ttccagcttc agccaggtac cgaagcgctc tgcgtggtgc agcggcgtgg
    35641 gtggcaggaa gcggcgcagg cgggcctgcg cggccagtac gtcggcgacg cttacgtcgc
    35701 cgacatcgct ttcctggctg gcatcagcgg ccggcatggg ccaccagcgg ggtgcggtcg
    35761 accgccgcat gcgggcacgg gcggcgaaga agacgcctcc gtaccggcac cgtggtcgct
    35821 acggtacggg tgttcatacg gatgctcctt ccacggcggt gacctgcacg gacacgcagt
    35881 cgtagatctt ctcgatctgc cggcacagcg tttccgccgg gcgctggcca tccaccacca
    35941 gctgcaggtg ccagcggcca tcgtcggccg ccaccggcgc gccgctgatc gcacgcggcg
    36001 cgaagccacg gcgttcggcc atgccgatca cgcgcagcag cgcgccttcg gccgggtgca
    36061 gcaccaggtc aagccggtag tgcattgggg gtctcctggc gggcgtgggc gggattgctt
    36121 tccagcatcg tgctgttggc ggtgttcggc ggcaccagcg gccacacgtt ggcgcgtgca
    36181 tcgatggcca cgtgcagcag ggccgggccc ggctcggcca gcaaggcagc caggccacct
    36241 tccacgtcat cgcgtgcgtc gatgcgggtc gcggcgatgc cgaacacctg cgccagcgcc
    36301 acgaagtccg ggttgtcgga caggtcgatc tcgctgtagc gctcggcgaa gaacagctcc
    36361 tgccactgcc gcaccatgcc cagcgaactg ttgtccagca gcacgatctt caccggcagc
    36421 cggcaacgcg cgatggtggc cagctcctgc acgttcatca tgaagctgcc gtcgccggac
    36481 accagtacca ccgtgcgatc ggggcaggcg aactgggcgc ccatcgccgc cggcaggccg
    36541 aagcccatgg tgcccagcgc gccactggtc aggtggttgc gcgggtggtt gaagcggcag
    36601 tgctgcgcca cccacatctg gtgctggccg acgtcgcagg cgatcaccgc atcggccggt
    36661 gccagctcgc tcaggcgctt cagcagggcc ggggcgtaga tgtgctggcc cggtgcgtcg
    36721 tagcgcgcgg cgaatcgatc acgatgctgc gcacagcgct tgcgccatgc gtcctggtgg
    36781 gccttggggg aggggaaggc cgcacgcagg gcgcggatgg catggccgac attgccgggc
    36841 acggcgacgt cggcactgcg cagcttggag atctcgtagg cgtcggcatc gatgtggacg
    36901 acacgggcga acggcgcgaa ctcggccagc ttgccggtgg cacggtcatc gaaacgtgcc
    36961 cccagcacca gcagcaggtc gctttcctgc accgccatgt tggccgcgcg ggtgccgtgc
    37021 atgcccagca tgcccagcga ctgcggatgg ctggccggca gagcacccag accacgcagc
    37081 gtcatcacgg tggggatggc gctcacctcg acgaagtcac gcaggtcctg caccgcatcg
    37141 ccgagcgcga tgccgccgcc ggcgtagacc accggcttct cggccgcggc cagcgcggca
    37201 atggcttcgg cgatggcgac ctcggccggg gccggcggcg gctcgacgct gctcggcacg
    37261 tgcgccggca gatggctggc atcggccagc tgcacgtcct tgggcaggtc gatcagcacc
    37321 gggccgggcc ggccctcgcg ggcgatacgg aacgcatcgg cgaccacgcg cggcagatca
    37381 tcgacactgc gcaccagcca gctgtgcttg acgatcggca gggtcaggcc gaacacatcc
    37441 agctcctgga aggcgtcggt gcccagcagc ggcgtggcga cctggccggt gatgcagacc
    37501 atcggcaccg aatccagcat cgcatcggcg atgccggtga ccaggttcga ggcgcccggg
    37561 ccggaagtgg ccacgcagac gccgacctgg ccgctggcgc gggcgaagcc attggcggcc
    37621 agtgcggcgc cctgctcatg gcgtaccagg atgtgcttca gcgacgagtc caccagcgcg
    37681 tcgtagaacg gcatgatggt gccgccggga tagccgaaca gcgtgcggac gccttcggct
    37741 tccagcgcct gggtcagcca gcgcgcgccg ttgggcggcg cgctgcggtg tgtcgaagag
    37801 ttcatggggg aaccttgcaa agcgggtggg ggagggccgc gcggttacgc ggcctgtcct
    37861 tgcaaccaga ccatcttggc gcgcagttcc ttgcccacct tttcgatcgg gtgctccagg
    37921 tcggcctgct tgaacttgtt gtagttcggc aggcccgctt cgtactcggc cacccagttc
    37981 ttggtgaagg tgccgtcctg gatgtccttc agcacttcct tcatgcgcgc cttggtgccg
    38041 gcgtcgatca cgcgcgggcc gctgacgtag tcgccgtact gcgcggtctc ggaaatgaat
    38101 tccagcatgc gcgagatgcc gccttcgtag aacaggtcga cgatcagctt cagttcgtgc
    38161 agcacttcgt agtaggcgat ctccggctgg tagccggctt cgaccagggt ctcgaaaccg
    38221 gcctgcacca gcgccgaggc gccgccgcac agcaccgcct gttcgccgaa cagatcggtt
    38281 tcggtctctt ccttgaaggt ggtctggatc aggttggcgc gggcgccgcc caggccaccg
    38341 gcataggcca gggcgtagtc ggcggccttg ccgctcttgt cctggtagac cgcccagatg
    38401 cacggcacgc cgcggccgat ttcatactcg cggcgcacca gcgcgcccgg gcccttcggc
    38461 gcgaccagca ccacgtccag gtcctcgcgc ggcttgatca tgtcgaagtg cacgttcagg
    38521 ccgtgcgcga acaacagcac cgcgccctgc ttcatgttcg gcgccagcac gtcgtcgtag
    38581 agcttcttct gcaccatgtc cggggtcagc acggcgacca ggtcggcgtc ctttaccgct
    38641 tcagccggtg ctttcacggt gaagccgtcg gcctgcgcct tgacctcggt cgggccgccc
    38701 ggacgcaggc ctaccaccac gtcgaagccg gattcgcgca ggttcagtgc gtgggcgcgg
    38761 ccctggctgc cgtagccgat gacggcgatc ttggtctggg gcaggtcgtt ggtgctcatg
    38821 ggggaggttc cttgcggtgg gaagaaaaaa gaacggccgg tcgtcgaggt gacgtgccgg
    38881 ccggtcaggg gaaagcggtg gaggaggtgc cgcgcatcgc acaggcacag ccaccacgag
    38941 gcgtcgtggt ggtgtgggtc ctggttttga agatggcgtt gttcatggtg gttgcgtctg
    39001 aaaccaggtc ctggaatgaa aaaacccgca ccggggcggg tgcgggtttt tgatgagttc
    39061 cggtgtgttt gttgcttaca cgctggctcg tcccgcacct gttggttggg taataagtac
    39121 gagcacaaga atcgaacgca gcgatgcggc gccggtgtcg gcggcttcga tgtgggttcg
    39181 cggtggcgtg ttgtgatgca acatgtggtc gagagaaaca cagccgtttt ggcgatgtca
    39241 accctcgcga cagaattttt ttcggtttcc gctgcatcca gcgcaatcgc ttgtggcaca
    39301 aggatggttg ccgctgaaag tgtttcggtg aacccgaatt cactcttttc agggcagttt
    39361 ttgcgcggat tccgggttgt attcgccttg ctgggtgcgg accttggtcc gaacccgcca
    39421 acggccttcg cccatgacct ctgcccgata ccgcgtgaag gccgcagcgg cgaagatcgg
    39481 ggaccaccct tccatcggaa cctgaccgtg tcccgacgtc ttgcccgtac cctgctggcc
    39541 gccgccgtgc tggccaccgt gcccgcactg tcttacgccg ccgaccgcat caccggccac
    39601 accttcgcca cccgttcgga ggtgatcgcg ccccacgcca tggcggcgac ctcgcagccg
    39661 ctggccaccc agatcgcgct ggacgtgatg aagaagggcg gttcggcggt ggacgcggca
    39721 atcgccgcca acgctgcact cggcctgatg gagcccaccg gcaacggcat cggcggcgac
    39781 ctgttcgcca tcgtctggga cccggagacg cagaagctgt atggctacaa cggttcgggc
    39841 cgctcgccga agtcgctgac cctggccgag ttccagcgcc gtggcctgaa ggacatcccg
    39901 gccaccggcc cgctgccggt gtcggtaccg ggcgcggtgg acggctggtt cgcgctgcac
    39961 gagcgcttcg gccgcacgcc gatggccgac aacctggccc cggccatccg ctacgcccgc
    40021 gagggccatc cggtggccga agtgatcgcc tactactggg atcgctcggt gcccaagctg
    40081 tcgcagtacc cgggcttcaa ggagcagttc acgatcaacg gccacgcccc gcgcaagggc
    40141 gagatgtgga agaacccgaa cctggccagc accctgcaga agatcgccga tggcgggcgc
    40201 gacgccttct acaagggtga tatcgcccgc accatcggcg attacttcaa ggccaatggt
    40261 ggttacctga gctaccagga catggccgac caccacggtg agtgggtcga gccggtcagc
    40321 agcaactacc gcggctacga cgtgtgggaa ctgccgccga acagccaggg catcgccgcc
    40381 ctgcagatcc tcaacgtgct ggaaggctac gatttctcga agattccgtt cggctcgccg
    40441 gaacacgtgc acctgttcgt ggaagcgaag aagctggcct tcgccgaccg tgcgcgtttc
    40501 tacgccgaca tggcgttcca gccggcgccg gtgcagaagc tgatttccaa ggaatacgcc
    40561 gcgcagcgcc gtgcgctgat ctcaatggac aaggcattga aggaagtgca gccgggcaca
    40621 ccgaaacagc tggaagaggg cgacaccatc tacatgaccg tggccgacgc cgacggcatg
    40681 atggtgtcgc tgatccagtc caactaccgc ggcatgggca gcggcatggc gccgccgggg
    40741 ctgggcttca tcctgcagga tcgcggcgag atgttcgtgc tgcagaagaa ccatcccaac
    40801 ggctacgcgc cgggcaagcg gccgttccag accatcatcc cggccttcat caccaagggc
    40861 ggcaagccgt atgcgagctt cggcgtcatg ggcggggcga tgcagccgca gggccacgcg
    40921 cagatcgtga tgaacctggt ggacttcggc atgaacctgc aggaagccgg tgatgcgccg
    40981 cgcatccagc acgaaggctc gaccgaaccg accgggcagg ccacggcgat gaccgacggt
    41041 ggtgaggtga atctggaaac cggattcccg tacgagacgg tgcgtgcgct gatgcgcaag
    41101 gggcatcgca tcgtattcgc cgacggcccg tatggcgggt accaggcgat catgcgtgat
    41161 ccggacaccg gggtttacta cggtgcgtcg gagagccgca aggatgggca ggcggcgggg
    41221 tactgaggtt tcccggccaa cgggcgcagc cccctctgc
//
LOCUS       DAOKIP010000016        41222 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.016,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000016 DAOKIP010000000
VERSION     DAOKIP010000016.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 41222)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 41222)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..41222
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.016"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            120..971
                     /locus_tag="QEL58_000752"
     CDS             120..971
                     /locus_tag="QEL58_000752"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019338031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HDS1675265.1"
                     /translation="MGAIVLLPLCVDDAALDRCLAALDAGTAPGTAVWLADDAQTGPR
                     AQAVVEHWLAHTPLQAEYTRRARPLGEVAHLDEMLRACDGLDVAVLAPDSVPAPGWLQ
                     QLQDAFARDAAIATATPWCNAGETAAWPRLGEINPEPQDPAMLAHTCATLPTLHPELP
                     SAVTHAVLVRGNARRRAGGLDVDSYAGWNAALVDLSLRMAGLGWRNVLCETAFVSRAG
                     EAISRDGDLEALAARWPGWVPRLADFLMHDPLHGLRADLQQRMQQAIMPREQGDLFVP
                     PAPEPPA"
     gene            968..1807
                     /locus_tag="QEL58_000753"
     CDS             968..1807
                     /locus_tag="QEL58_000753"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HDS1675266.1"
                     /translation="MNVAIAAIVVTYQSGSTIDACLSRLRQAQDVAEIRVIDNGSLDG
                     TLDIVQRHASHDARVRFVGNPDNPGFAAANNQGVADSASPWLAFINPDLMVEADTLAE
                     LRRRAEALGDCLLGVEQLDEHGQADAAVRRRDPDFLLMLRSPGRGAKLAVPRDPHQAL
                     QRVPALSGALLMMPRVLFDRIGGWDAGYRLHAEDLDLCRRARESGAVVAIANDLQVTH
                     VRGVSSRSRPFFVEWHKHKGLWRYFQKFEAKQRPLPVRAAVWAAIWAHALMLVPRLLR
                     RSL"
     gene            1861..3042
                     /gene="pncB"
                     /locus_tag="QEL58_000754"
     CDS             1861..3042
                     /gene="pncB"
                     /locus_tag="QEL58_000754"
                     /EC_number="6.3.4.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008264910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate phosphoribosyltransferase"
                     /protein_id="HDS1675267.1"
                     /translation="MPIIQSLLDTDLYKFTMMQAVLHQHPGAQVQYRFKCRTPGIDLA
                     RYIDQIDEEIDHLCTLRFSDAELDYMRGLRFVKPDFADFLGLFHLDRKYIQLRASKAV
                     PGEIELDITGPWLHTILFEVPLLAIINEVWFRNTTTADFAEGERRLQAKAALLRDTPG
                     FEQCRIADYGSRRRYSRDWHARLLPLLRDALGPQLVGTSNVHFARLYGMTPHGTMAHE
                     YLQAFQALGPRLRDSQVAALESWAREYRGDLGIALSDVVGLDAFLRDFDMYFCKLFDG
                     VRHDSGDPFDWGDRMLAHFQQRRVDPRSKVLVFSDGLDIPKVMRLYDYFRGRCQVAFG
                     VGTHLTNDLGPTPLNIVIKMVRCNGQPVAKLSDSPGKSMCDDPGYLAYLRQVFELPQP
                     E"
     gene            complement(3065..3430)
                     /locus_tag="QEL58_000755"
     CDS             complement(3065..3430)
                     /locus_tag="QEL58_000755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004143030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675268.1"
                     /translation="MRNSILLCVALMSVSALAQASSGNIRFSGRIAEPGCTTNLSQGE
                     LSLAACPPSAKGSTVEVTALADGQAATLRDGKRQGQKLSVSASAMRTGDIAFSERYRV
                     QASQQQPLQGAYLVVVDYL"
     gene            3890..4429
                     /locus_tag="QEL58_000756"
     CDS             3890..4429
                     /locus_tag="QEL58_000756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010482005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 fimbrial protein"
                     /protein_id="HDS1675269.1"
                     /translation="MHKNTLIAALMLAAAPLAANAADGTITFNGKVTDKTCTISTPGG
                     KDFAVNLPTVSKNTLATAGSVAGRTPFAINLTKCSAGNVATYFEPGSTVDFNSGRLVN
                     QASANAATNVQLQLLGSNNQFLPIKAAGAGLAQTNSQWVTVGTDGSADLNYYAEYYAT
                     AAATPGDVTSSVKYTIIYN"
     gene            4515..5246
                     /locus_tag="QEL58_000757"
     CDS             4515..5246
                     /locus_tag="QEL58_000757"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone"
                     /protein_id="HDS1675270.1"
                     /translation="MKAFFPRALLLAAFTLPFCQDALAGVVVNGTRVIYPAQAREVTV
                     QVDNVGDSPALVQAWIDSGDANQTADTSDAPFVLTPPIARVEPGRSQALRVIFSGAQL
                     PADRESVFWLNVLDVPPSPDNADSNGEQNYLQVAFRSRLKLFYRPQGLKGVANDAPAA
                     LRWTRTGDRLRVENPSPFHVTLAEVHAVTGSSEKAVEDKGAMVAPKQSLEFAAPAGTD
                     QVRFITINDYGGRVEHTIRLGSTGG"
     gene            5339..7903
                     /locus_tag="QEL58_000758"
     CDS             5339..7903
                     /locus_tag="QEL58_000758"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial biogenesis outer membrane usher
                     protein"
                     /protein_id="HDS1675271.1"
                     /translation="MSIHQAICLLAAGVACPGWALAAPANLGEQALMAQSGAANARAP
                     ESAQFNSSFLSGQAKQVDLAAFSNGNPMVAGTYRVDVYVNGGWQGRRDLQFKADAQGH
                     VDACLPLPMLEEMGVDSEAVLLQQDPTLPTDKTSCVPVQQRMANAYGIYDSGNLRYDL
                     SIPQVFLRREARGYVNPALWDRGINAGFVGYSFNAIDSDSRVEGGQRNRSAYLGLNAG
                     LNLGGWQFRHDSNLTWSEGDGRHWQSIATYAQRGIPQVRGMLTIGEAYTTGELFDSIG
                     YRGASLASDDRMLPDSLRGYAPVVRGIAETNARVEVRQNQQLIYSSTVSPGSFVIDDL
                     YPTGYGGDLEVSVIEADGRRREFKVPFGSVPQMLREGVSRYALTAGQVRNKLLADEPW
                     LVQGTYQRGIGNQLTLYGGSALSDGYLSLLYGVGLSTPVGAFAADVTHARTSFDHYGN
                     HTGASVRLSYSNMIGETGTNLTLAAYRYSTEGFYSLQDALYGRDSDKRGIDPTTRGRQ
                     RSQFQLTLNQPLGRRGGALYVTGSVRDFYDRAGTSKQYQVGYNNAWRSVNFGFSALRT
                     EEGVLGRSDTQYLLSMSVPLGRGTHPVSFSADLGMRDRGGYDNSRVGITGSAGVDNNF
                     SYGAALSDSREGGTTAVGNVEYRSRYSALNATYSHSRDFRQASVGANGSVVVHPGGFT
                     FTPQRGDTMVLVEAPGARDAIVSNAPGLRVDGRGYAVVPYVSPYRLNTVTLDPQGMAH
                     DVELESTSQSVAPFAGAISYLRFDTRKGNALLIQVRNPDGRSMPFGAQVKDEQGQPVG
                     MVSQGGRLYVRSEQNQGRLLVEWGAGADQRCTIDYQVPAGADASKTGFIPLEAACR"
     gene            7894..8931
                     /locus_tag="QEL58_000759"
     CDS             7894..8931
                     /locus_tag="QEL58_000759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004143034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 fimbrial protein"
                     /protein_id="HDS1675272.1"
                     /translation="MPMIPFRGRRLLATLAVLGGALLAQQASAACRIQINGFVAQDVQ
                     MDMGQIVILPSTPVGGVIKELSVPINQQNNVARCDYWYGGSSTGEYVNAPQKRPVAGF
                     ANVYETGVAGVGIRLFRDSGAIQTYYPHSINFGANSTISLIGGQFRIQLIKTAAQTGS
                     GVIAPNGRFTTYYFDGDGPSRPVLTSTFRGSGTTVVSPTCEVEAGSRNIAVDFGSVPN
                     TSFTGVGSRAVDRDFEIRLNCQGSNVASYQSKIGIRLDADQDSSNMPGVLKLSAATNS
                     ATRIGIQMVQRDGSTEREVRFGQAINVGTTAPGTSVMSLPLRARYVQTQAGTVGAGVA
                     NGQATFTIQYE"
     gene            9145..10683
                     /gene="bcsE"
                     /locus_tag="QEL58_000760"
     CDS             9145..10683
                     /gene="bcsE"
                     /locus_tag="QEL58_000760"
                     /inference="COORDINATES: protein motif:HMM:NF022448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cellulose biosynthesis protein BcsE"
                     /protein_id="HDS1675273.1"
                     /translation="MTAAHLAIAGLPSEFVEMRGGGLYWVVAAGSAPTDLLGAGVLST
                     AAALQDAVLVTLGRGAEPMLSLLADEQGPLRLRLFQRSHHGMQQALRGLPQDLPRVAS
                     AATGLSLVQFPVAALDGWDDTRLARWCERLQRWAGQAGQIVLLLCHGEVATLAPRLLP
                     LNRACAGVAQLHPHRGALQLLLHYWSNSHGVVAQRSFGVLQEGTGLRHVAEADSGDEA
                     ASLASGSDRDVFLAQADVLEGAPPLSAAWRLYDGWAGLLPAALQAREATVVLAINENA
                     QVDALARLLHRLRRERGTALKLVVRELQPCLRYADERLLMQCGCSLVVPADTPLPRLL
                     TLLETVQRQRWQGQLADDPEPLIRAHRPPSLSGLVNAARFRQIAAERIDQDGSAVESA
                     VLALQPVAGLRAEQTLQQLRIRRQGDLACIYRGQVRLFLFGCRRDAVEQALGNLFRLP
                     WRELFDGYQRLAEYDIAAMNPSGSDPDAELLPEAPAALPAVAPVREAPAVVAPKPLRL
                     GDTA"
     gene            10680..10859
                     /gene="bcsF"
                     /locus_tag="QEL58_000761"
     CDS             10680..10859
                     /gene="bcsF"
                     /locus_tag="QEL58_000761"
                     /inference="COORDINATES: protein motif:HMM:NF022570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cellulose biosynthesis protein BcsF"
                     /protein_id="HDS1675274.1"
                     /translation="MTTDQQLWTLIVACAVVMIPFGAMLGTLWRGLRRRATRWLPPRH
                     LRRAGVRQRAPRSAA"
     gene            10856..12487
                     /gene="bcsG"
                     /locus_tag="QEL58_000762"
     CDS             10856..12487
                     /gene="bcsG"
                     /locus_tag="QEL58_000762"
                     /EC_number="2.7.8.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cellulose biosynthesis protein BcsG"
                     /protein_id="HDS1675275.1"
                     /translation="MSPQNVPASPFAWADLRGWNLYFLSKVVLAWMGALDLKILPNLL
                     FLGALLVPLRWRWARIARTIVAVPVGVALYYQDTWWPPFQRLLVQPGVLDFSADYWLE
                     LAQRFINWQMVAVLALLLVAYFLLKPWLRITTLSVLGMLGLAVMAIPMPAGWNWGQGT
                     ATAASPGTAGATTGGLPPANNDTLNAWLSSFYQQQASLKTSFPAPASGAPFDVIILNI
                     CSLAWSDLDEVGLRQNNLLDHMDVVFDDFNSATAYSGPAAIRLLRASCGQTSHTKLFD
                     PVPAECQLFSNLQRLGFQSELAMNHDGHFDDFIGELHQYGGLQAQPMDISAFPKALVA
                     FDKSPLRRDGDVLMAWWKQRLAEAPQQVALFYNTISLHDGNRIVGADGRSNAADYKAR
                     AEMVLGDMAGFVDAVEKSGRRAMIVVVPEHGAALHGDRMQIPGMREIPSPSITHVPVG
                     VKLVGMGAPAAGGPRHIPEPSSYLAVSELVSRVYALNAQSPPSERNWDSLLKGLPQTP
                     SVSENEGAKVIDYGGKPWLQLQGSQTWSPYPEDAR"
     gene            12487..12666
                     /locus_tag="QEL58_000763"
     CDS             12487..12666
                     /locus_tag="QEL58_000763"
                     /inference="COORDINATES: protein motif:HMM:NF022398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675276.1"
                     /translation="MPADILAVPATLSVEEDDIDLLRRSLDMPDLPYVDFSAQHERAQ
                     ALARWPLLAELERRG"
     gene            12663..13418
                     /gene="yhjQ"
                     /locus_tag="QEL58_000764"
     CDS             12663..13418
                     /gene="yhjQ"
                     /locus_tag="QEL58_000764"
                     /inference="COORDINATES: protein motif:HMM:TIGR03371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cellulose synthase operon protein YhjQ"
                     /protein_id="HDS1675277.1"
                     /translation="MSNLLSLQGVHGGTGVTTVLAALGQGLHAQGQRVLLVECSPDQM
                     LGLHLGLPADVEGGWARAQLDGSDWRDAAYAIAPGLAVLPYGRVDAEGAMQVEQQLRQ
                     APSTWADRLPLLQAQFDWVLFDLPQRLPAHAAAINQHARCTLPLRLACVDPVSHVFLQ
                     RQPDDERLVLANRYDPAVPVQRDLMQLWLHTHARRLVPQPLHEDARVPAALASKQPLG
                     RYAANSLAAADVDGLVLWCLAEAARRQHREGGP"
     gene            13418..16042
                     /gene="bcsA"
                     /locus_tag="QEL58_000765"
     CDS             13418..16042
                     /gene="bcsA"
                     /locus_tag="QEL58_000765"
                     /EC_number="2.4.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-forming cellulose synthase catalytic
                     subunit"
                     /protein_id="HDS1675278.1"
                     /translation="MGARVYYLGWGRLRERVHASWPTRALLWLLQWTGWAFLRLEGPA
                     WQSIAPRLRNAFPQIQGDRRWRPGDPLRLLIQAAWLSLVRLVPKASKRRQRLAEANRQ
                     RIAELRGAAGRGRLRYLRAMSDAPSEFWNSRFAGWFGQRVRALSPRSRHLLTLLIGLI
                     TLGLAALCITQPFTYVAQFVFVLLLWVIALLVRRMQGRYATLVLVVLSITVSCRYLWW
                     RYTATLNWNSTFDLICGVILLAAETYSWLVLMLGYVQVAWPLRRRPAPLPADVRQWPT
                     VDVLIPTYNEDLALVRHTVYAAMGLDWPADKLRIHILDDGKREEFRAFAERAGVNYIT
                     RTDNRHAKAGNLNHALTLIDGELVAIFDSDHLPVRSFLQITCGWFLRDPKLALVQTPH
                     HFFSADPFERNLQVFRSDPNEGELFYGLVQDGNDLWNAAFFCGSCAVLRREAIDAIGG
                     FATETVTEDAHTALRLHRKGWNSAYLRIPQAAGLATDSLGAHVNQRIRWARGMVQIFR
                     IDNPLLGKGLSLFQRFCYANAMLHFLAGIPRLVFLTAPLAFLLLHVYIIYAPALAILL
                     FVVPHMAHASLTNARIQGKYRRPFWGEVYETVLAWYIARPTTVALFSPGRGKFNVTDK
                     GGTQAGDRFDWRVARPYLVLALLNVLGLCFAVWRFMHGPADERGTVVVSSLWVLYNLL
                     IIGGALAVAAEVQQVRRTHRVTTRLPMALEIPDGRRLRGVLQDYSNDGVGVELGEDAQ
                     LAEGQQVQVLLGRGRREFAFPARVQRTVGHRLGLLLLFEDERQRVEFAQCTFARADAW
                     LDWHAGYQPKSLPRSLWSVLVLGWRGYRRMGDFTPFDLDRPAHWNRRLLRWLASFAPQ
                     RPLPSHPADPAADPGLRP"
     gene            16039..18408
                     /gene="bcsB"
                     /locus_tag="QEL58_000766"
     CDS             16039..18408
                     /gene="bcsB"
                     /locus_tag="QEL58_000766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008267973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cellulose biosynthesis cyclic di-GMP-binding
                     regulatory protein BcsB"
                     /protein_id="HDS1675279.1"
                     /translation="MSIPSSLRWLLLPLLALPVASGNSAPAPVPVPPPAPANAAPVAA
                     PPAATTTSATPAVPAEAAALTQTWAGSAWPWQRQSTFAQLGRRQDTLLSGVRNATTFE
                     FQVRRDRLVRDAELDLSFTPSPSLLPTLSHLRVYLNDAMMGVVPISNDQLGRPVQAKL
                     PLDARLIADFNQVRLEFVGHYTDICEEPTHSSLWVNLSSNSTLRLGGQPLAMQDDLAN
                     FPLPFFDPRDTARLELPVVFAGTPSLAQQRAAAVMSSYFGSLAGWWRQARFPVSFGAL
                     PEKGHAVVLAVNGKFPAVIGNHAPVKGPVIELMALPDDPQRKLLLVLGRNDDDLQKAV
                     AAMAAGNVLFRGRQVSIDEIKPLAPRKPYDAPNWVRTDRAVRLAELLDYPQQLHANGV
                     SPQPITVNLNLPPDLFIWRNQGIPLNLRYRYTPPFGSDESRLGVAINDQFISSFPLVR
                     RTGKQGLEEIRLPVLAGDAGADDGRLLIPALKLGDRNQLRFDFNFASVMGSAQRDHCQ
                     TVLPPNLQAAIEEDSTIDFSGFHHYMGLPDLSAFALSGFPFTRMADLSETVVLVPPAA
                     SEAQVSLLLNLVGGLGVQTGYPAYGLRLSDDWKQASALDADLLMLGALPAELRGSQQL
                     SLLIDDQRTRLLNGQSPSPQQAMEQARRGSRDGDPAVTEVAVTAQAPFAAIIGMQSPH
                     HAQRSIVSLAASNAADYGLLDDALSDTGKREAIAGSVAILRTSGIHSQFVGEHYYVGA
                     LPWWLLLWYHLADHPALLAVLATLVVLMFAFLLWRTLRWVAAKRLDPGH"
     gene            18408..21989
                     /gene="bcsC"
                     /locus_tag="QEL58_000767"
     CDS             18408..21989
                     /gene="bcsC"
                     /locus_tag="QEL58_000767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cellulose biosynthesis protein BcsC"
                     /protein_id="HDS1675280.1"
                     /translation="MARTRHPLVTASGLVLLGLAGAGPCAAQALPATPGGTVAEQRQW
                     LLQQVRIGEATGRQSLIEDALARLRMLAPDDRGTLVAILEVQLSQQKLDDAEATLARL
                     RQIGAGSRELAAGERLWQAYRGDLQQELQQARLFAAGGRSEEALAIYRRLFNDDPPGL
                     QLGLEYWRLRGTQAEGRAPAIRALTELDRSYPGNVTLLQALSQLLFAAGRDSEALAAL
                     QRMGRNPEARGMAADAEWAYLKEQAADERSVRRLQDFITRNPTFTDIALVRERYADQH
                     KRVSDPAWRAGLRGQQLLDAGRNEDAERAFLQALRGYPREPGLLGGLGMALMRQGRRE
                     QAITYFQRAVQATPAGDSNDKWRDLIASTRYWLQLDQADAALKAGRLDDAERLYAQAR
                     RQQPRDVNAALGLVDVAVARGDDAAAERQLQSARRIAPNDANVVRKLVQLYGRTDPQR
                     LEAFINALPAAQRKLYAEDLRQLQITRLRERREQALAAGDAATAIELGTQLRAELPDD
                     AWLAYALGNELRAAGREQEADAVVADMARRNGSAEARYAQALYLSGSDRLPQALAVLD
                     ALPQAQWDDDIRALSARLHRQQLTDHLWELRAQGREAEAIALLLQQPPSTDNDMLLAE
                     WARLRGDHAQALHYYQRVLAAQPDNVDAQLGRIQAWIGSGDLASARRQMQDAPPQVAD
                     EATGQQRQLATIWTDLREDAKALAILRALLARRTAPDAQSWRDAARLVRRDDPQQALD
                     MYAQAMADNGLLAPAQAAPRDNRALTLASRETAGDDWLRRSLRSDVETLYQQENPTLT
                     VMQDTGRRSDGTPGISRLSRDTRIAHLDAPFAGGLGWARIEQVQFDAGRFQTNANGAY
                     DEDFGSCDLDLIQADGTRLRAPGCTRFVHQQRTSGAGFAVGWRTLDDRWNFDIGHTPS
                     NYAVGNWLGGLTFNGDLGRFGWGATVSRRPMTNSLLSQAGAYDPRSGIRWGGVTANGL
                     TFSLGYDQGGRNGVWSNWSWHRLTGENVVDNTRARAMVGWYHKLIQRTDMRLDVGTTA
                     MYWRYQKDLGGYSLGQGGYYSPQRYASLSLPVSFAWRNDNWSVRLDGSVSVSSARTTS
                     ISRYPDQALIERVIAQLEPQYGPLTLDQAGLYTGDSKSTGTGYRLYGAVERRLGDHFV
                     LGAAGTLQRSRDFSPNSFQLYLRYTFKPWQGNLPLPVSPLVPYGEFR"
     gene            21973..23115
                     /gene="bcsZ"
                     /locus_tag="QEL58_000768"
     CDS             21973..23115
                     /gene="bcsZ"
                     /locus_tag="QEL58_000768"
                     /EC_number="3.2.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cellulase"
                     /protein_id="HDS1675281.1"
                     /translation="MANSADLHRRRLLQAAVAVPLLGWGAAQAQPAPSASRWPAWQVL
                     LDSSLSRDGRMIDRSQDDQRSTSEGQSYALFFALVANDQALFDRILAWTQDNLAGGDM
                     RQHLPAWLWGRDAKGDWQVLDSNPASDSDLWLAYALLEGARLWRRPALQAIAEGMLQQ
                     VRAREIVQLPGLGPMLLPGPQGFVEGDATRINPSYLPLPLLRRFASVDRKGPWPALAA
                     NTVRMLQQSSPHGFAPDWTAWQAGGFVADPVKGAVGSYDAIRCYAWAGMTAPRDPLFR
                     PQLAALSGPLQRLRSGAAMWEKIDTRSGQGQGEGNYGFRAALLPYLLAQGENERARAL
                     QASLPSAEQQRADAPAYYSQMLSLFGLGWAEGRWRFNADGRLQLRW"
     gene            complement(23155..24471)
                     /locus_tag="QEL58_000769"
     CDS             complement(23155..24471)
                     /locus_tag="QEL58_000769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019182523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NCS2 family permease"
                     /protein_id="HDS1675282.1"
                     /translation="MPLFERLFQLQQHGTTVRTELLAGVTTFLTMSYIVFVNPEILGT
                     TGMDAGAVFVATCLAAALGSAVMALAANFPVGMAPGMGLNAFFAFTVVGAAGLPWQQA
                     LGAVFISGLVFLVLSLTGVRAWLVSGIPASLRSAIVAGIGLFLAIIALQKSGVIVGNE
                     DTLVALGPLNTAPPLLALAGFLLIAVLEARRIRGAILIGILAVTAAGWALGDVQYQGL
                     VSLPPSLAPTFLQLDLPGLLHHDGGAPIAVLLQVVLVFVLVEVFDATGTLYGVVGRAG
                     LLKLPGAQKRFGRALLADSTAIVAGSLLGTSSTTAFAESASGVQVGGRTGLTALVVSA
                     LFLAALLFSPLAAMVPSYATAPALLFVAGLMLRELVEVDWSDLTESVPAALCALAMPF
                     TYSIANGLAFGFIAYAALKAGTGRWREVHPAVWLVAVLFTLRYALE"
     gene            complement(24535..25224)
                     /locus_tag="QEL58_000770"
     CDS             complement(24535..25224)
                     /locus_tag="QEL58_000770"
                     /inference="COORDINATES: protein motif:HMM:NF024895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin family protein"
                     /protein_id="HDS1675283.1"
                     /translation="MKTLIITTAALLLSGTATAATPDWDGFYLGAQASHGEGHSKDRS
                     NASASEKSVRGFSGGVQGGRRWQFDNNIVVGVEGALSFGNITRDWKDREQHRYSPYYG
                     KDAVTRSGTFDVTLGRAMGRWLPYLGAGVTVAQQAFTLGCDKSLVEATNGCRVAEFET
                     RASHLSTGANATAGVLYRFNDRLSAGAEYRYTHLGSSPVTLDDPNYPAAARRSFHTDY
                     SSATLKLNYHF"
     gene            complement(25468..27132)
                     /gene="ettA"
                     /locus_tag="QEL58_000771"
     CDS             complement(25468..27132)
                     /gene="ettA"
                     /locus_tag="QEL58_000771"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019398294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-dependent translational throttle protein
                     EttA"
                     /protein_id="HDS1675284.1"
                     /translation="MSSQYIYTMNRVSKVVPPKRQIIKDISLSFFPGAKIGLLGLNGA
                     GKSTVLKIMAGVDTDFEGEARPQPGIKVGYLAQEPELDPTKTVREAVEEGVGEVLQAQ
                     AALDAVYLAYAEEGADFDALAKEQERLEAILAAGDAHTLENQLDVAADALRLPPWDAV
                     VGKLSGGEKRRVALCRLLLQKPDMLLLDEPTNHLDAESVEWLEQFLARYTGTVVAVTH
                     DRYFLDNAAEWILELDRGRGIPWKGNYTDWLTQKDERLKQEDNQEKARQKAIQKELEW
                     SRQNAKGGRTKGKARLARLEELQSVDYQKRNETNEIFIPPGERLGNAVMEFKNVSKKF
                     GDRLLFDNLSFLVPAGAIVGIIGPNGAGKSTLFKMITGQEKPDTGEIVVGPTVKLSYV
                     DQSRDALEGNHNVFQEIAGGLDILNINGIEIQSRAYIGRFNFKGQDQQKMVGSLSGGE
                     RGRLHMAKTLLQGGNVLLLDEPSNDLDIETLRALEDALLEFPGNTFVISHDRWFLDRI
                     ATHILAFEGDSHVEFFQGNYREYEEDKRRRMGDDAAPKRLRFKALK"
     gene            27389..27862
                     /locus_tag="QEL58_000772"
     CDS             27389..27862
                     /locus_tag="QEL58_000772"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RcnB family protein"
                     /protein_id="HDS1675285.1"
                     /translation="MRINRVMAGAVASVLALGAVAPAFADNDHRDRREWREDRREWRQ
                     DRRDWERDRREARRDWERDRRDWHRDHDRYYRPAPPRVVYRPAPPPRYGSYGWRVGSP
                     YRNYYSGPVYVVNDYPRYHLRRPPYGHHWIRDDRGNMLLVAIATGVIAQYVLSGR"
     gene            28036..29289
                     /locus_tag="QEL58_000773"
     CDS             28036..29289
                     /locus_tag="QEL58_000773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011260263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydroxymethyltransferase"
                     /protein_id="HDS1675286.1"
                     /translation="MFPRDVRIESYDPELAKAIAAETQRQEDHVELIASENYTSPAVM
                     EAQGSQLTNKYAEGYPGKRYYGGCEYVDIAEQLAIDRLKQLFGADYANVQPHSGSQAN
                     QAVYFALLQPGDTILGMSLAHGGHLTHGAKVNASGKLFNAVQYGVNDQGLIDYDEVER
                     LALEHKPKMVVAGFSAYSQVIDWARFRAIADKVGAYLFVDMAHVAGLVAAGVYPSPLE
                     HAHVVTSTTHKTLRGPRGGIIVAKGADEDLVKKLQSIVFPGIQGGPLMHVIAGKAVAF
                     KEALEPGFKAYQQQVVKNAQAMANTLIARGYKIVSGGTQNHLMLVDMIGKDVSGKDAE
                     AALGKAHITVNKNSVPNDPRSPFVTSGLRLGTPAVTTRGYVEQDCVDLANWIADVLDA
                     PADEAVIARVRDAVSAQCRKYPVYG"
     gene            29357..29776
                     /locus_tag="QEL58_000774"
     CDS             29357..29776
                     /locus_tag="QEL58_000774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005412223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675287.1"
                     /translation="MDERRLKYLYAALAAVFGLPSLLMGGAAATMLLLMGLGQFGHGT
                     LASVTVMPLWGLAGIAGCLAWLWLSAGYLLQGRAGLQVRAVWWWLLLAGGLAALPVIW
                     LAAWIGWQEVGSALEVLMLGPSLLVPAAMLVWLKRRA"
     gene            29804..30226
                     /locus_tag="QEL58_000775"
     CDS             29804..30226
                     /locus_tag="QEL58_000775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005415253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675288.1"
                     /translation="MDEHLHKRMVAVGGLVLGLPALAAGGTVAVLGLMVAMDGKYLSG
                     NEPTLLLLWSLGGIIGLLSWLWLSGVFLRRGRDGLRQSSPAAWVGLLLGVLAALAVVA
                     VTLHLVFKDGEFALLSYLGLGPPFLLPAAHLAWLRWGT"
     gene            30323..30760
                     /locus_tag="QEL58_000776"
     CDS             30323..30760
                     /locus_tag="QEL58_000776"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675289.1"
                     /translation="MNPLGRLTHVRLRWHLLLFSIPCALVGVLATCALFMVWLARPQP
                     PEAFLMAAANWVVMSVWSAYATVVLGDSWRTAGMEGLHSHAGCLAALPIVSAFQATAA
                     VAMLFTAIGWEPAALLYTPFLMTICAPWASLSWHMRWLSRQEE"
     gene            30874..31305
                     /locus_tag="QEL58_000777"
     CDS             30874..31305
                     /locus_tag="QEL58_000777"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675290.1"
                     /translation="MRTVRRRHGLYLLLHSLFFSIPCALAGLAGLLVLLWGWAHGSGK
                     GAFLAWGAAWGVLSVAACILVVWLANTWQMRGPDGLKAAAPMLVALFLLSAAQVVSAL
                     IMTVPGFGWEPNLLVLAMGWGAPWLSLACHFRWLAKGGGPE"
     gene            31400..31921
                     /gene="nrdR"
                     /locus_tag="QEL58_000778"
     CDS             31400..31921
                     /gene="nrdR"
                     /locus_tag="QEL58_000778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005415256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor NrdR"
                     /protein_id="HDS1675291.1"
                     /translation="MYCPFCQHADTRVIDSRVSEDGATIRRRRECEACNERFSTLETV
                     ELKLPAIVKSDGTREAFDQRKVRAGFDRALQKRAVPEEKIEAAVRAVVHQLRISGERE
                     VPSIKVGEFVMNELRKLDHVGYVRFASVYRSFEDVADFREEIEKLERELPSSTEQLQL
                     LGDVIALTKKKKG"
     gene            32000..33085
                     /gene="ribD"
                     /locus_tag="QEL58_000779"
     CDS             32000..33085
                     /gene="ribD"
                     /locus_tag="QEL58_000779"
                     /EC_number="1.1.1.193"
                     /EC_number="3.5.4.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     diaminohydroxyphosphoribosylaminopyrimidine
                     deaminase/5-amino-6-(5-phosphoribosylamino)uracil
                     reductase RibD"
                     /protein_id="HDS1675292.1"
                     /translation="MTTPFSVLDHLHMANALRLAERGAYTTRPNPMVGCVIAHGERVV
                     GQGWHQRAGGPHAEVFALREAGSEARGATAYVTLEPCAHYGRTPPCALALIEAGVSRV
                     VAAMRDPFPKVDGGGFDLLREAGIDVAEGLMATQARELNKGFLSRVERNRPWLRVKLA
                     ASLDGRTAMADGTSKWITGAAAREDVQHWRARAGAILTGADTVLTDDPMLTVRLADAE
                     VMPPLRVVLDSRLRSLECSRVREGGAPTLYLHNAVVSPPDAADAAFASVALRHGHLDL
                     GAVLALLAERGINEVHTEAGATLAGALLRGGWVDELLLYLAPTLLGDSGRPLLAGLGI
                     DAMDQQRRLRVVDQRQVGEDLRLLLRA"
     gene            complement(33125..33898)
                     /locus_tag="QEL58_000780"
     CDS             complement(33125..33898)
                     /locus_tag="QEL58_000780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675293.1"
                     /translation="MTAARTADVSQQDQASAPNTHVALPVARAIMRTLCVPLALCIAV
                     AGHAAAEPSISPEQAFELFTKAVLESDADASAKLHRSMVDINHYETESVADLHQYAPA
                     LVQSMVDWLVQFKLFSAKSAHEYGTLMTDAYAGTQCRATGTRAASQYLREKEKVTEIM
                     VQFSCQVPAFNTESGEVTDAAILRKMRKSTKYAFRTWAAMLKSGEKRTMTGEAMLTGD
                     PDTGYFPDAYNLRSLTSVLYSALPAERVDPFAEMERDAE"
     gene            complement(33895..34557)
                     /locus_tag="QEL58_000781"
     CDS             complement(33895..34557)
                     /locus_tag="QEL58_000781"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675294.1"
                     /translation="MRIPCLLLLLFIPFASHATPTGKLSPEQAFDLFARALLESDAEA
                     GDTLHRAMHAAQHGDAPLAVKAARLVPEMVEALAKGEIDDDIPPEFAAPLGEVIRSTY
                     LRSHCRATSAVPVNESAQGLQQVTLSFRCQVPDWDAAAPPLTDEVISRMRADASFAYG
                     LITTTVPTLPRRSITDTVTLTADANGNYFFVDGQALLTPLIQSTMPMLLLAGHTRSQG
                     QP"
     gene            complement(34662..35270)
                     /locus_tag="QEL58_000782"
     CDS             complement(34662..35270)
                     /locus_tag="QEL58_000782"
                     /inference="COORDINATES: protein motif:HMM:TIGR01352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HDS1675295.1"
                     /translation="MNTPTPGRLIPEMVMPPNARWTGLLPALFALTACLQQADSDVAR
                     EPARSRLQTDAPRCTEDDDIVACLRRYASPPRKVFTARADCSVFTQRGDSVAIEPTTQ
                     AAHPARFPDRVRSSGKVHLQMRVEATGRLAGIRVLESSGHPQLAEAAMAAARDWCYLP
                     AHRDGRDTGGDVEAWFHFNVVTWPQSGKAPQAEASAPRPPPR"
     gene            35510..36607
                     /locus_tag="QEL58_000783"
     CDS             35510..36607
                     /locus_tag="QEL58_000783"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675296.1"
                     /translation="MPHPNRNLLLSALLLLGVSASPVVSADEEAPAPARAFTQAQALQ
                     DLTAIIECRAPASVPKQLSPHLWAVALGNEVARPFDTWAVVEQPNASLHEVALPEPIT
                     VFGHSTRRIAVLSEAVMAIIEGVTLEEMSRQLELRPLSATVAPHIHVRELSLRNRGDI
                     GFQVRSLTASRISSHPNAVLLGCEDRYDTRMEQLRRRGKEPDVVFASGVDVATELDDV
                     LTCRADALRNYTAGWAVGMSAHTTDARFKGWKDGEDKEGYRWWTPPAPVMIAGRPVSR
                     FVKVGLTLYAELDGDIAPALAEEWALPSYDGWDETAFVGFHDTDTAADGWLEDRARIV
                     RAWGQGKTLHGCEYQQNRPEFGEHADDDDEA"
     gene            complement(36649..37527)
                     /locus_tag="QEL58_000784"
     CDS             complement(36649..37527)
                     /locus_tag="QEL58_000784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019338044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675297.1"
                     /translation="MKTPLRTLLASALLCAPVLTTAAPAQTPEQSLDLYARVLIEDDA
                     AAARTLNDALRSAPDSEDALTLAPGAVAKALAEPWMALQASIGVTPDAAAAEEMFAKV
                     LKASACRATGSTIEDNEYVNGQKIATVDFSCKVVDLDSVRPLFIASISSDDPAARRRF
                     IDAYTQALKSGARRTVKGSHKMYSSAEQAYWFTGSFDMLISPVLDALAPFEQWSEDAQ
                     AASAPKVTGVPSCDLLLQQHRSCVAKIAPDQISGVDAMAEELKAKAQVQSADEMTQEC
                     KALRPIAEMMWTDACA"
     gene            complement(37629..38285)
                     /locus_tag="QEL58_000785"
     CDS             complement(37629..38285)
                     /locus_tag="QEL58_000785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675298.1"
                     /translation="MLAYRLPLLLCLPLAAQAATAEKLSPEQAFDLYARALLESDAQA
                     AEALVRALPADSLWTTDMVRGLARFEAEMRAAVAGQSDDEEEVPAALTEAMVAQITRT
                     FASSHCRAVPGQVIAETAPGGKARVTFTCQVPVWDTESGLLAEPDIQQKLRDDQVFAT
                     YLIASELRMAELQTITGTAVLEGSAEMGYFPGGGMMRSLSPVLFSVFPAALTDALKDE
                     "
     gene            complement(38428..39048)
                     /locus_tag="QEL58_000786"
     CDS             complement(38428..39048)
                     /locus_tag="QEL58_000786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010481980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675299.1"
                     /translation="MRKILIVAALLAAAPFSASADALSYTYVEGGWTQVKVDDNALDD
                     PKVDGAYLRGSFALSEQVHVFGGWSRTRKTYHYNDGSLKLELDQPELGIGYHMPWTDR
                     VDFTADAAWVRQNVELTDRYYGYSERFKDHTNLGRVTVGLRGKPSPKTEAWVKTGYMD
                     GGNNFKGTWVGTLGGQINFTRTWGLVGEISGYRDVTQYSAGVRASF"
     regulatory      39279..39423
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00050"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="FMN riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="flavin mononucleotide"
                     /db_xref="RFAM:RF00050"
     gene            39498..40133
                     /locus_tag="QEL58_000787"
     CDS             39498..40133
                     /locus_tag="QEL58_000787"
                     /EC_number="2.5.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019338046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="riboflavin synthase"
                     /protein_id="HDS1675300.1"
                     /translation="MFTGIIEGVGRLAARESIGGDVRFTFNVGNLPFDNVQMGESIAI
                     NGVCLTVIAFDASSFQADASTETLGLTTLGQLGEGAVINLERAMRPTDRLGGHLVSGH
                     VDGLGQVLSIHEDARAQRWRFAAPASLRRYIAKKGSICVDGVSLTVNEVDDEGFEVAL
                     IPHTVANTAFSASGVGSAVNLEIDLVARYVERLVSLPASGRQLPSEEGDAA"
     gene            40130..>41222
                     /gene="ribB"
                     /locus_tag="QEL58_000788"
     CDS             40130..>41222
                     /gene="ribB"
                     /locus_tag="QEL58_000788"
                     /EC_number="4.1.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004143417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3,4-dihydroxy-2-butanone-4-phosphate synthase"
                     /protein_id="HDS1675301.1"
                     /translation="MNFAPIPEILEEIRLGRMVVIVDDEDRENEGDLIMAAELVKPSD
                     INFMVTHGRGLVCLPLTRTRAADLGLAPMVQANTAQFQTNFTVSIEAAEGVTTGISAH
                     DRAHTIRTAVKPNAKPADLHQPGHIFPLIAQPGGVLTRAGHTEAGVDLAMLAGLEPAG
                     VLVEILNPDGSMARRPELEVFAREHGLKMGSIADLIAYRLATEKTVERVDERDIDTEF
                     GPFKLVTYRDRIAHDLHFALVRGTPDAETPTLVRVQVENPLADLLHWRRDDFGVAATD
                     ALRAIDAEGAGVMVVLSAPRDGEALLARLRQQPAPVVPGKDKDVGQWRRNGAGAQILS
                     DLGLGKLRVLGTPRRQVGLAGYGLEVVETV"
BASE COUNT         6573 a        13793 c        13855 g         7001 t
ORIGIN      
        1 aggaacccag cttctgctcc ggctgttgct gttgccctgg cctgtagcgg gtgccgggtg
       61 caacccggcc gataccctcc cagtgctagg ctgtgggcac cgacaaccac ggaggcggga
      121 tgggggcgat cgtgttgttg ccgctgtgcg tggacgacgc tgcgctcgac cgctgcctgg
      181 cggcgctgga tgccggcacc gcaccgggta ccgcggtctg gctggccgac gatgcgcaga
      241 ccggtccgcg tgcacaggcg gtggtggagc actggttggc acatacgccg ctgcaggccg
      301 aatacacccg gcgcgcacgg ccactgggcg aagtcgccca ccttgatgaa atgctgcggg
      361 cctgcgatgg cctggacgtg gcggtgctgg caccggacag cgtgccggcg ccgggctggc
      421 tgcagcagct gcaggacgcc ttcgcccgcg atgccgccat cgccaccgcg acgccatggt
      481 gcaacgccgg ggaaacggcg gcctggccac ggctgggcga gatcaatccc gaaccccagg
      541 acccggccat gctggcgcac acctgtgcca cgctgccgac gctgcatccg gaactgcctt
      601 cggcggtcac ccatgcggta ctggtgcgcg gcaatgcgcg ccgccgcgcc ggtggcctgg
      661 atgtggacag ctacgccggc tggaacgctg cactggttga tctcagcctg cgcatggccg
      721 ggctgggatg gcgcaacgtg ctgtgcgaga ccgccttcgt cagccgggca ggggaggcga
      781 tcagccgcga cggtgatctt gaagcgctgg ccgcgcgctg gccgggctgg gtgccgcggc
      841 tggccgactt cctgatgcat gatccgctgc atggactgcg tgccgatctg caacagcgca
      901 tgcagcaggc gataatgccg cgcgaacagg gcgacctgtt cgtcccgccc gcgccggagc
      961 cacccgcttg aatgttgcca ttgccgccat cgtcgtcacc taccagagtg gcagcaccat
     1021 cgatgcatgc ctctcgcgcc tgcgccaggc gcaggatgtg gccgagatcc gggtgatcga
     1081 caatggttcg ctggatggca cgctggacat cgtgcagcgg catgccagcc atgatgcccg
     1141 cgtgcgtttc gtcggcaatc cggacaatcc cggttttgct gccgccaaca accagggcgt
     1201 ggccgactcg gccagcccgt ggctggcctt catcaacccg gacctgatgg tcgaagcgga
     1261 taccctggcc gagctgcgcc gccgtgccga ggcgctgggc gattgcctgc tcggcgtcga
     1321 gcagctggac gagcatggcc aggccgacgc ggcggtacgc cgtcgcgatc ccgatttcct
     1381 gttgatgctg cgatcgcccg gccggggggc gaaactggcg gtgccgcgcg atccgcacca
     1441 ggccctgcag cgggtaccgg cgctgtccgg tgcgttgctg atgatgccgc gcgtcctgtt
     1501 cgaccgcatc ggcggttggg atgcgggcta ccgcctgcat gccgaagacc tggacctgtg
     1561 ccgccgcgcg cgcgagtccg gcgcggtggt ggcgatcgcc aacgatctgc aggtgaccca
     1621 cgtgcgcggt gtctccagcc gctcgcggcc gttcttcgtc gaatggcaca agcacaaggg
     1681 cctgtggcgc tacttccaga aattcgaggc gaagcagcgc ccgctgccgg tgcgcgctgc
     1741 ggtatgggcg gcgatctggg cgcatgcgct gatgctggtg ccgcgcctgc tgcgcaggtc
     1801 gctgtagcgg agggcggtgg caggcccccg attcaccccg gcgggcgcat aatccgcccc
     1861 atgcctatca tccagtccct gctcgacacc gacctgtaca agttcaccat gatgcaggcg
     1921 gtgcttcatc agcatcccgg cgcccaggtg cagtaccggt tcaagtgccg cacccccggc
     1981 atcgacctgg cccgctacat cgaccagatc gacgaagaga tcgaccacct gtgcaccctg
     2041 cgcttcagtg acgcagagct ggactacatg cggggcctgc gtttcgtaaa gccggacttc
     2101 gccgatttcc tcggcctgtt ccatctcgac cgcaagtaca tccagctgcg cgcgtcgaag
     2161 gcggtgcctg gcgagatcga gctggacatc accggcccgt ggctgcacac catcctgttc
     2221 gaagtgccac tgctggcgat catcaacgaa gtctggttcc gcaacaccac cacggccgac
     2281 ttcgccgagg gcgagcgccg gctgcaggcc aaggccgcgc tgctgcgcga tacccccggc
     2341 ttcgaacaat gccgcattgc cgactacggc agccgccgcc gttactcgcg tgactggcac
     2401 gcgcgcctgc tgccgttgct gcgcgatgcc cttggcccgc agctggtcgg caccagcaac
     2461 gtgcacttcg cgcggctgta cggcatgacc ccgcacggca ccatggccca tgagtacctg
     2521 caggcgttcc aggcgctggg cccgcgcctg cgcgactcac aggtggcggc actggaatcg
     2581 tgggcgcgcg agtaccgcgg cgacctcggc atcgcgctgt ccgacgtggt cggcctggac
     2641 gcgttcctgc gcgacttcga catgtacttc tgcaagctgt tcgacggcgt acgccatgat
     2701 tcgggcgatc cgttcgactg gggcgaccgc atgctggcgc atttccagca gcgccgcgtc
     2761 gatccgcgca gcaaggtgct ggtgttcagc gatgggctcg acattcccaa ggtgatgcgc
     2821 ctgtacgact acttccgcgg tcgctgccag gtcgcattcg gcgtcggcac ccacctgacc
     2881 aatgatctgg gcccgacgcc gctcaacatc gtcatcaaga tggtccgctg caatggccag
     2941 ccggtggcca agctcagcga ttcgccgggc aagagcatgt gcgacgaccc gggttacctg
     3001 gcttacctgc gccaggtctt cgagttgccg cagccggaat gaccgcgccg gtgggggcgg
     3061 gcgcttacag gtagtcgacg accaccagat aggcgccctg cagcggctgc tgctgcgagg
     3121 cctggacgcg gtagcgttcg gagaaggcga tatcgccggt gcgcatcgcg ctggccgaca
     3181 ccgacagctt ctggccctgg cgcttgccgt cgcgcagcgt cgcagcctgg ccatcggcca
     3241 gcgccgttac ttccaccgtc gagcccttgg ccgacggcgg gcaggccgca aggctcagtt
     3301 cgccctggga caggttcgtc gtgcagcccg gctcggcaat gcggccgctg aaacggatgt
     3361 tgccgctgct ggcctgggcc agcgcactga cggacatcag ggccacgcac agcagaatgg
     3421 agttcctcat gacacgttct ctggttcggt gtgtcctagt tagcgacagc ttcgatcagc
     3481 ctttaatagg acgagttcga atctgctagg gccatcacca agaaagagtg atgcacatca
     3541 aagaagctga tttccgcctg aaaaaggccg gattccgtgc atgccgggtg cgtcactcga
     3601 tacgtcatcg aacgtcgttt gcggcctgcc tgggcccgcg tcaaatcccc cacgcgcccc
     3661 tgggttccat ttcgcttagc acggcacatt tgtgccgtca ataaattggc gttcataaaa
     3721 ataatgagac tttcatcaca cttgtgccta tacttgcgtc acggattcag gggaaggtat
     3781 gtccgagtcc ggccacaggt gagacgcaag gatgggtctt gttagcccgg cagtgctcct
     3841 tgcttcctcc tctacttctc atctcttcag tagggttagg taaaagcgaa tgcacaagaa
     3901 cactctcatc gccgctctga tgctggccgc cgctccgctg gccgccaacg ccgccgacgg
     3961 caccatcacc ttcaatggca aggtcaccga caagacctgc accatctcga ccccgggcgg
     4021 caaggacttc gccgtcaacc tgccgaccgt gtccaagaac accctggcca ccgccggttc
     4081 cgttgcgggc cgtaccccgt tcgccatcaa cctgaccaag tgcagcgccg gcaacgtcgc
     4141 cacctacttc gagccgggtt cgaccgtcga cttcaacagc ggccgcctgg tcaaccaggc
     4201 ctcggccaac gctgccacca acgtgcagct gcagctgctg ggctccaaca accagttcct
     4261 gccgatcaag gctgccggcg ctggcctggc ccagaccaac tcgcagtggg tcaccgtcgg
     4321 caccgacggc tcggccgacc tgaactacta cgctgagtac tacgccactg ccgccgccac
     4381 cccgggcgac gtcaccagca gcgtcaagta cacgatcatc tacaactgat cgtcgccgta
     4441 cccgcattgg ccggcgtacg cgccggccag tgctccgcgg cctttggcca cacctctcga
     4501 gcgtagtact tccgatgaaa gcattctttc cccgggcgct gctgctggca gcgttcacgc
     4561 tgcccttctg ccaggacgca ctggccggcg tggtggtcaa tggcacgcgg gtgatctacc
     4621 cggcgcaggc gcgcgaagtc accgtgcagg tcgacaacgt gggcgactcg ccggccctgg
     4681 tgcaggcctg gatcgacagt ggcgatgcca accagaccgc cgataccagc gatgccccgt
     4741 tcgtgctgac gccgccgatc gcgcgcgtcg agccgggccg cagccaggcg ctgcgcgtga
     4801 tcttctccgg tgcgcaactg ccggccgacc gtgagtcggt gttctggctg aacgtgctgg
     4861 atgtgccgcc gtcgccggac aacgccgaca gcaatggcga acagaattac ctgcaggtcg
     4921 cgttccgttc gcgcctgaaa ctcttttacc ggccgcaggg cctgaagggc gtcgccaacg
     4981 acgcaccggc agcgctgcgc tggacccgca ccggcgaccg cctgcgcgtg gaaaacccca
     5041 gtccgttcca cgtcacgctg gccgaagtgc atgccgtgac cggcagcagc gaaaaggccg
     5101 tcgaggacaa gggcgcaatg gtcgcgccga agcagagcct ggagttcgcc gcgccggcgg
     5161 gcaccgacca ggtgcgcttc atcaccatca acgattacgg cggtcgggtg gaacacacga
     5221 tccgtctcgg cagcaccggg ggctgaacgc gccgcgccgg cccagggcca gcgcatcccg
     5281 ccaccgccgc cgcgcggcga attgaaggaa tgtcagtgtg atcggaaaca gattgacatt
     5341 gtcgatccac caggcgatct gcctgttggc tgctggcgtg gcctgcccag gatgggcatt
     5401 ggcagcgccg gccaatctgg gcgagcaggc gctgatggcg cagagcggcg cagccaatgc
     5461 gcgtgccccg gaatcggccc agttcaattc cagcttcctg tccggccagg ccaagcaggt
     5521 cgacctggcg gccttcagca atggcaaccc gatggtggcc ggcacctacc gcgtcgacgt
     5581 ctacgtcaac ggcggctggc aggggcgtcg cgaccttcag ttcaaggccg atgcgcaggg
     5641 ccatgtcgat gcgtgcctgc cgctgccgat gctggaagaa atgggcgtgg acagcgaggc
     5701 cgtgctgctg cagcaggacc cgacgctgcc gaccgacaag accagctgcg tgccggtgca
     5761 gcagcgcatg gccaatgcct acggcatcta cgacagtggc aacctgcgct acgacctcag
     5821 catcccgcag gtgttcctgc gccgcgaagc gcgcggctac gtcaacccgg cgttgtggga
     5881 ccgtggcatc aacgccggct tcgtcggcta cagcttcaat gccatcgaca gcgacagccg
     5941 cgtcgaaggt ggccagcgca accgcagcgc ctacctcggc ctcaatgccg gcctgaacct
     6001 gggcggctgg cagttccgcc acgactcgaa cctgacctgg tccgagggcg atggccgcca
     6061 ctggcagagc attgccacct acgcacagcg cggcatcccg caggtgcgcg gcatgctcac
     6121 catcggtgag gcctacacca ccggcgagct gttcgattcg atcggttacc gcggtgccag
     6181 cctggccagc gacgaccgca tgctgcccga ctcgctgcgc ggctacgcgc cggtcgtgcg
     6241 cggcatcgcc gaaaccaacg cgcgcgttga agtgcgccag aaccagcagc tgatctattc
     6301 ctccaccgtg tcgccgggca gcttcgtcat cgatgacctg tacccgaccg gctacggcgg
     6361 cgacctggaa gtgagcgtga tcgaggccga tggccgccgc cgcgaattca aggtgccatt
     6421 cggttcggta ccgcagatgc tgcgcgaagg cgtgtcgcgc tacgcgctga ccgccggcca
     6481 ggtacgcaac aagctgctgg ccgatgagcc gtggctggtg cagggtacct accagcgcgg
     6541 catcggcaac cagctgaccc tctacggcgg cagtgcgctg agcgatggct acctgtcgct
     6601 gctgtacggc gtcggcctgt ccacgccggt cggtgcgttc gccgccgacg tcacccatgc
     6661 gcgcacctcg ttcgatcact acggcaacca cactggcgcc agcgtgcgct tgagctacag
     6721 caacatgatc ggcgagaccg ggaccaacct gaccctggcc gcgtaccgct attcgaccga
     6781 aggcttctac agcctgcagg acgcgctgta tggccgcgac tcggacaagc gcggcatcga
     6841 tccgaccacc cgtggccgcc agcgcagcca gttccagctg accctgaacc agccgctggg
     6901 ccgtcgcggc ggcgcgctgt acgtgaccgg ctcggtgcgt gacttctacg atcgtgccgg
     6961 tacgtccaag cagtaccagg tgggctacaa caacgcctgg cgttcggtga acttcggttt
     7021 ctccgcactg cgtaccgaag aaggcgtgct cggtcgttcc gacacccagt acctgctgtc
     7081 gatgagcgtg ccgctgggcc gtggcaccca cccggtgtcg ttcagtgccg acctcggcat
     7141 gcgcgaccgc ggcggctacg acaacagccg cgtcggcatc accggttctg ccggtgtcga
     7201 caacaacttc agctacggcg cggccctgtc cgattcgcgc gagggtggca ccaccgcggt
     7261 cggcaatgtc gagtaccgca gccgctactc ggcactgaac gcgacctaca gccattcgcg
     7321 tgatttccgc caggcctcgg tcggtgccaa cggcagcgtg gtcgtgcatc cgggcggttt
     7381 caccttcacc ccgcagcgcg gcgacaccat ggtgctggtc gaagcaccgg gcgcgcgcga
     7441 tgccatcgtc agcaacgccc cgggcctgcg cgtggacggc cgcggctacg cggtggtgcc
     7501 gtacgtgtcg ccgtaccgcc tcaacaccgt caccctcgac ccgcagggca tggcccacga
     7561 cgtcgagctg gaaagcacca gccagtcggt cgcgccgttc gccggtgcca tcagctacct
     7621 gcgtttcgac acccgcaagg gcaacgcgct gctgatccag gtccgcaacc ccgatggccg
     7681 cagcatgccg ttcggcgcgc aggtcaagga tgagcagggc cagccggtgg gcatggtcag
     7741 ccagggtggc cgcctgtacg tgcgcagcga acagaaccag ggccgcctgc tggtggagtg
     7801 gggcgccggt gccgatcagc gctgcaccat tgattaccag gttccggcgg gcgccgacgc
     7861 gtccaagacc ggcttcattc cgctggaggc agcatgccga tgattccttt ccgtggccgc
     7921 aggctgctgg ccacgctggc cgtgctcggt ggcgcgctgc tggcgcagca ggccagcgcc
     7981 gcctgccgca tccagatcaa cggtttcgtc gcccaggatg tgcagatgga catgggccag
     8041 atcgtgatcc tgcccagcac gccggtcggt ggtgtgatca aggaactcag cgtgccgatc
     8101 aaccagcaga acaacgtcgc ccgttgtgac tactggtacg gcggcagctc gaccggtgag
     8161 tacgtcaacg cgccgcagaa gcggccggtg gccggcttcg ccaacgtcta cgagaccggc
     8221 gttgccggtg tgggcatccg cctgttccgc gactccggcg cgatccagac ctactacccg
     8281 cattccatca acttcggcgc caattccacc atctcgctga tcggcggcca gttccgcatc
     8341 cagctgatca agaccgccgc acagaccggt tcgggcgtga tcgcgccgaa cggccgcttc
     8401 accacctact acttcgatgg cgacggcccc agccgcccgg tgctgacctc gaccttccgc
     8461 ggttcgggca ccaccgtggt cagcccgacc tgcgaagtgg aggctggcag ccgcaacatt
     8521 gccgttgatt tcggcagcgt gcccaacacc agcttcaccg gcgtcggctc gcgcgcggtc
     8581 gatcgtgact tcgagatccg cctgaactgc cagggcagca acgttgcgtc ttaccagagc
     8641 aagatcggca tccgcctcga cgccgaccag gacagttcga acatgcccgg cgtgctgaag
     8701 ctgagcgcgg ccaccaacag tgcgacccgc atcggcatcc agatggtgca gcgtgatggc
     8761 agcaccgaac gcgaagtccg cttcggccag gccatcaatg tcggcaccac cgcgccgggt
     8821 accagtgtca tgagcctgcc gctgcgggcc cgctatgtgc agacccaggc cgggaccgtc
     8881 ggtgccggtg tcgccaacgg gcaggcaacg ttcacgatcc agtacgagta acagcgtttt
     8941 tccatcgctg agcactgccc cgcacgtcgc ctgttccgca ggcggcgttg actgcgtctt
     9001 gatgccgcaa acgtgaagat cggagctatc atgaccgtac agaaacatga atgtgatgtg
     9061 cgtcatggaa atgaccttcc cttcaccgca gcgtctccgc catcgggcct tccacccggt
     9121 tgaggggcgt tgaaaggacc cggcgtgaca gcagcccacc ttgccattgc cggattgcct
     9181 tcggagttcg ttgagatgcg cgggggcggc ctgtactggg tcgtcgcggc cggcagtgcg
     9241 ccgaccgacc tgctcggcgc cggcgtgctg tccaccgccg ccgcactgca ggacgccgtt
     9301 ctggtgacgc tgggccgtgg cgccgagccg atgctgtcgc tgctggcgga cgagcagggg
     9361 ccgctgcgcc tgcgcctgtt ccagcgttcc caccacggca tgcagcaggc gctgcgcggc
     9421 ttgccgcagg acctgccgcg ggtggcgtcc gccgccaccg ggctcagcct ggtgcagttt
     9481 ccggttgctg cgctggatgg ctgggatgac acgcgcctgg cgcgctggtg cgagcggctg
     9541 cagcgctggg cggggcaggc cggccagatc gtgctgctgc tctgccatgg cgaagtcgcc
     9601 accctggcac cgcgcctgct gcccttgaac cgggcctgcg ccggcgtggc ccagctgcac
     9661 ccgcatcgcg gcgccctgca gctgctgctg cactactggt cgaacagcca tggcgtggtg
     9721 gcgcaacgtt cctttggcgt gctgcaggag ggcaccggcc tgcgccacgt ggccgaggcc
     9781 gatagcggtg acgaggctgc cagccttgcc agcggaagtg atcgcgacgt cttcctggcc
     9841 caggccgacg tgctggaggg cgcgccgccg ctgtccgccg catggcgcct ctacgatggc
     9901 tgggccggcc tgctgccggc cgcattgcag gcgcgcgagg ccaccgtggt gctggccatc
     9961 aacgagaacg cccaggtcga cgcgctggcc cggctgctgc accgcctgcg ccgcgagcgc
    10021 ggcaccgccc tgaagctggt cgtgcgcgag cttcagccct gcctgcgtta cgccgacgaa
    10081 cgcctgctga tgcagtgcgg gtgcagcctg gtggtgccgg ccgacacgcc gctgccccgc
    10141 ctgctgacgc tgctggaaac cgtgcagcgg cagcgctggc agggccagct ggccgatgac
    10201 ccggagccgc tgatccgcgc ccatcggccg ccgtcgttga gcggcctggt caatgccgca
    10261 cgtttccgcc agattgccgc agaacgcatc gaccaggacg gcagcgcggt ggaaagcgcg
    10321 gtgctggccc tgcagccggt ggccgggctg cgcgccgaac agaccctgca gcagctgcgc
    10381 atccgccgcc agggtgatct tgcctgcatc tatcgcgggc aggttcgcct gttcctgttc
    10441 ggctgccgcc gcgatgcggt cgagcaggcg ctgggcaatc tgttccgcct gccttggcgc
    10501 gaactgtttg atggctatca gcgccttgcc gaatacgaca tcgccgccat gaacccgagc
    10561 ggcagtgatc cggacgccga gctgctgccc gaggcgccgg ctgccttgcc cgcagtggct
    10621 ccggtgcggg aagcgccggc cgtcgttgcc ccgaagccgc tgcggctggg agataccgca
    10681 tgaccaccga ccagcaactc tggaccctga tcgtcgcctg cgcggtcgtg atgattccct
    10741 tcggggccat gctgggcacc ctgtggcgcg ggctgcgccg ccgtgccacg cgctggttgc
    10801 cgccccgcca tctgcgccgc gccggcgtac gccagcgtgc gccgcggagc gctgcatgag
    10861 tccgcagaac gttcccgcat ctccgttcgc atgggccgac ctgcgtggct ggaacctgta
    10921 tttcctgtcc aaggtggtgc tggcctggat gggcgcgctg gacctgaaaa tcctgcccaa
    10981 cctgttgttc ctgggcgcgc tgctggttcc gctgcgctgg cgctgggcac gcatcgcacg
    11041 caccatcgta gccgtgccgg taggcgtggc gctctattac caggacacct ggtggccacc
    11101 gttccagcgc ctgctggtgc aaccgggcgt gctggatttc tcggcggact actggctcga
    11161 actggcccag cgcttcatca actggcagat ggtggcggtg ctcgcgctgc tgctggtggc
    11221 ctacttcctg ctcaaaccgt ggctgcgcat caccaccctg agcgtgctgg gcatgcttgg
    11281 cctggccgtc atggcgatac cgatgccggc cggctggaac tgggggcagg gcaccgccac
    11341 ggcggccagc ccagggaccg ccggggcgac gacaggggga ctgccgcccg ccaacaacga
    11401 cacgctcaat gcgtggctga gcagtttcta ccagcagcag gccagcctga agaccagctt
    11461 cccggcaccg gccagcggtg ctccgttcga cgtcatcatc ctcaacatct gctcgctggc
    11521 gtggagcgac ctggatgaag tcgggctgcg ccagaacaac ctgctcgacc acatggacgt
    11581 ggtgttcgac gatttcaatt cggccaccgc ctacagcggc ccggcggcga tccggctgct
    11641 gcgcgccagc tgtggccaga cctcgcatac caagctgttc gacccggtgc ctgccgagtg
    11701 ccagctgttc tcgaacctgc agcggctggg cttccagagc gagctggcga tgaaccacga
    11761 tggccacttc gacgacttca tcggcgagct gcaccagtac ggtgggctgc aggcacagcc
    11821 gatggatatc agcgccttcc cgaaggcgct ggtggcgttc gacaagtcgc cactgcgccg
    11881 cgatggcgac gtgctgatgg cctggtggaa acaacggctg gccgaagccc cgcagcaggt
    11941 ggcgctgttc tacaacacga tctcgctgca tgacggcaat cgcatcgtcg gtgccgatgg
    12001 ccgttccaac gccgccgact acaaggcgcg cgcggaaatg gtgctgggtg acatggccgg
    12061 ttttgtcgat gcggtggaaa agagcggccg gcgcgcgatg atcgtggtgg tccccgaaca
    12121 tggcgccgcg ctgcacggtg accgcatgca gattccgggc atgcgcgaga ttcccagccc
    12181 gtcgatcacc cacgtgccgg tgggcgtcaa gctggtcggg atgggcgcac cggcggccgg
    12241 tggcccgcgc cacatccccg agccgagcag ctacctggcc gtgtccgagc tggtctcgcg
    12301 cgtctacgca ctcaacgcgc agtcgccgcc gagcgaacgc aactgggaca gcctgctcaa
    12361 aggcctgccg cagacgccct cggtgtcgga gaacgaaggc gccaaggtca tcgactatgg
    12421 cggcaaaccc tggctgcagt tgcagggcag ccagacctgg agcccctacc cggaggatgc
    12481 gcgctgatgc ctgccgacat tcttgccgtg cccgccaccc tgtccgtgga agaggacgac
    12541 atcgatctgc tgcgccgcag cctggacatg ccggatctgc cctacgtgga tttctcggcc
    12601 cagcatgaac gtgcccaggc gctggcgcgc tggccgctgc tggcggaact ggagcggcgc
    12661 ggatgagcaa cctgttgtcc ctgcagggcg tccacggcgg taccggcgtg accacggtgc
    12721 tggccgcgct ggggcagggc ctgcatgccc agggccagcg cgtgctgctg gtggaatgca
    12781 gtcccgacca gatgctcggc ctgcatctgg gcctgcccgc cgatgtcgaa ggtggctggg
    12841 cgcgtgcaca gctggacggc agcgactggc gcgatgccgc ttatgccatc gcgcccggct
    12901 tggccgtgct gccctatggc cgggtggatg ccgagggcgc gatgcaggtc gagcagcagc
    12961 tgcgccaggc gccttcgacc tgggccgatc gcctgccgct gctgcaggcc cagttcgact
    13021 gggtgctgtt cgatctgcca cagcgcctgc cggcacatgc ggcagccatc aaccagcacg
    13081 cgcgctgcac cctgccgctg cgcctggcct gcgtcgatcc ggtcagtcat gtgttcctgc
    13141 aacggcagcc ggatgacgag cgcctggtgc tggccaaccg ctacgacccg gccgttccgg
    13201 tgcagcgcga tctgatgcag ctgtggctgc acacccatgc caggcggctg gtgccgcagc
    13261 cgttgcatga ggatgcgcgg gtgccggccg cactcgccag caagcaaccg ctggggcgtt
    13321 acgcggcgaa ctcgctggcc gcggccgacg tcgatggcct ggtgctgtgg tgcctggctg
    13381 aagcggcgcg gcggcagcac cgcgaaggcg gcccctgatg ggcgcccggg tctactacct
    13441 gggctggggg cgcctgcgcg agcgggtgca tgcgtcctgg ccgacgcggg cgctgctgtg
    13501 gttgctgcaa tggaccgggt gggccttcct gcgcctggag ggaccggcct ggcagtcgat
    13561 cgcgccgcgc ctgcgcaacg ccttcccgca gatccagggt gaccgtcgct ggcgtccggg
    13621 tgatccgctg cgcctgctga tccaggccgc ctggctgtca ctggtgcggc tggtgccgaa
    13681 ggcgtcgaag cggcggcagc gcctggccga agccaaccgc cagcggattg ccgagcttcg
    13741 cggcgccgca ggccgaggcc gcctgcgcta tctgcgggcg atgagcgatg cgcccagcga
    13801 attctggaac agccgtttcg caggctggtt cgggcagcgc gtccgcgccc tgtcgccgcg
    13861 ctcgcggcat ctgctgacgc tgctgatcgg cttgatcacg ctcgggctgg cggcgctgtg
    13921 catcacccaa ccgttcacct acgtcgcgca gttcgtgttc gtgctgctgc tgtgggtcat
    13981 cgccctgctg gtgcggcgca tgcagggccg ctacgccacg ctggtgctgg tggtgctgtc
    14041 gatcaccgtc tcctgccgct acctgtggtg gcgctacacc gccaccctga actggaacag
    14101 caccttcgac ctgatctgcg gcgtgatcct gctggctgcg gaaacctact cctggctggt
    14161 gctgatgctg ggctacgtgc aggtcgcctg gccgttgcgc aggcgacctg cgccgctgcc
    14221 ggccgacgta cggcaatggc cgacggtgga cgtgctgatt cccacctaca acgaagacct
    14281 ggcgctggta cggcataccg tatacgccgc gatgggcctg gactggcctg cggacaaact
    14341 gcgcatccac atcctggatg acggcaagcg cgaggagttc cgtgccttcg ccgagcgcgc
    14401 cggggtgaac tacatcaccc gcaccgacaa ccgccacgcc aaggccggca atctcaacca
    14461 tgcgctcacc ttgatcgatg gcgagctggt ggcgatcttc gacagtgacc atctgccggt
    14521 gcgctcgttc ctgcagatca cctgtggctg gttcctgcgt gacccgaagc tggcgctggt
    14581 gcagaccccg catcacttct tctccgccga cccgttcgag cgcaacctgc aggtgttccg
    14641 cagcgatccc aacgagggcg agctgttcta cgggctggtg caggacggca acgatctgtg
    14701 gaacgcggcc tttttctgtg gctcctgcgc ggtgctgcgg cgcgaggcca tcgatgcgat
    14761 cggcggcttt gccaccgaga ccgtcaccga agatgcgcat accgccctgc gcctgcaccg
    14821 caagggctgg aactcggctt acctgcgcat cccgcaggcg gccgggctgg ccaccgacag
    14881 cctcggcgcg cacgtcaacc agcgcatccg ctgggcgcgc ggcatggtgc agatcttccg
    14941 catcgacaac ccattgctgg gcaagggcct gagcctgttc cagcgcttct gctatgccaa
    15001 cgccatgctg catttccttg ccggcatccc gcggctggtg ttcctgaccg cgccgctggc
    15061 gttcctgctg ctgcacgtct acatcatcta cgcgccggcg ctggccatcc tgctgttcgt
    15121 ggtgccgcac atggcccatg ccagcctcac caatgcccgc atccagggca agtaccgccg
    15181 cccgttctgg ggcgaggtgt atgagaccgt gctggcctgg tacatcgcgc gtcccaccac
    15241 ggtggcactg ttcagcccgg ggcgcggcaa gttcaacgtc accgacaagg gcggcaccca
    15301 ggctggtgac cgcttcgact ggcgggtggc gcggccctat ctggtgctgg cactgctgaa
    15361 cgtgctgggc ctgtgctttg cggtgtggcg gttcatgcac gggccggccg atgaacgcgg
    15421 cacggtggtc gtcagctcgc tgtgggtgct gtacaacctg ctgatcatcg gcggagcgct
    15481 ggccgtggcc gccgaagtgc agcaggtgcg gcgcacccat cgcgtcacca cccgcctgcc
    15541 gatggcgctg gagattcccg atggccggcg cctgcgtggc gtgctgcagg attactccaa
    15601 cgatggcgtt ggcgtcgagc tgggcgaaga tgcccagctt gccgaaggcc agcaggtaca
    15661 ggtgctgctg ggtcgcggcc ggcgtgaatt cgctttcccg gcgcgcgtgc agcgcaccgt
    15721 cggccaccgc ttgggcctgc tgctgctgtt cgaggacgag cgccagcgcg tggagttcgc
    15781 ccagtgcacg ttcgcgcgcg cggacgcgtg gctcgactgg catgccggct atcaacccaa
    15841 gagcctgccg cgcagcctgt ggagcgtgct ggtcctgggc tggcgcggtt accgccggat
    15901 gggcgatttc actccgttcg acctcgaccg cccggcacac tggaatcgtc gcctgctgcg
    15961 atggctcgcc agctttgccc cgcaacgtcc gcttccttcc cacccggctg acccagccgc
    16021 tgatccaggg cttcgtccat gagcattccg tcttctctgc gctggctgct gttgcccctg
    16081 ctggccctgc cggtggcatc cggcaacagc gcacctgcgc cggttccggt gccgccgccc
    16141 gcaccggcga atgccgcgcc ggtggcagcg ccgcctgcgg cgaccacaac ctcggccacc
    16201 cccgcggttc cggccgaggc agcggcgctg acacagacct gggccggcag cgcctggccc
    16261 tggcagcggc agagcacatt cgcccagctg gggcgacgcc aggacaccct gctgtccggc
    16321 gtgcgcaacg ccaccacgtt cgagttccag gtccgccgcg accgcctggt gcgcgatgcg
    16381 gaactggacc tgagcttcac gccttcgccg tcgttgctgc cgaccctgtc gcatctgcgg
    16441 gtctacctca acgacgcgat gatgggagtg gtgccgatca gcaacgatca gctgggtcgc
    16501 ccggtgcagg ccaagctgcc actggatgcg cggctgatcg ccgacttcaa tcaggtgcgg
    16561 ctggagttcg tcggccacta caccgacatc tgcgaagaac ccacgcacag ttcgctgtgg
    16621 gtcaacctgt ccagcaacag caccctgcgc ctgggtgggc agccgctggc gatgcaggac
    16681 gacctggcga acttcccgct gccgttcttc gatccgcgcg acaccgcgcg gctcgaactg
    16741 ccggtggtat tcgccggcac cccgagcctg gcacagcagc gcgcggcggc ggtgatgtcg
    16801 tcgtacttcg gcagcctcgc cggctggtgg cggcaggcgc ggttcccggt gagcttcggc
    16861 gcgctgcccg agaagggcca tgcggtggtg ctggccgtga acgggaaatt ccccgcggtg
    16921 atcggcaacc acgcgccggt gaagggcccg gtgatcgagt tgatggcact gccggacgac
    16981 ccgcagcgca agctgctgct ggtgctgggc cgcaacgatg acgacctgca gaaggcagtg
    17041 gccgcgatgg cggccggcaa cgtgctgttc cgtggccgcc aggtcagcat tgacgagatc
    17101 aagccgctgg ccccgcgcaa gccgtacgac gccccgaact gggtgcgcac cgaccgcgcc
    17161 gtgcgcctgg ccgaactgct ggactatccg cagcagctgc atgccaacgg cgtgtcgccg
    17221 cagccgatca cggtcaacct caacctgccg ccggatctgt tcatctggcg caaccagggc
    17281 attccgctga acctgcgcta ccgctacacg ccgcccttcg gcagcgacga gtcgcggctg
    17341 ggcgttgcga tcaacgatca gttcatttcc agcttcccgc tggtgcggcg caccggcaag
    17401 cagggtctgg aagaaatccg tctgccggta ctggccggtg atgccggtgc cgacgatggc
    17461 cgcctgttga ttcctgcact caagctgggt gaccgcaacc agctgcgctt cgacttcaac
    17521 ttcgccagcg tgatgggcag tgcgcagcgc gatcattgcc agaccgtgct gccaccgaac
    17581 ctgcaggcgg cgatcgagga agattcaacc atcgacttct ccggattcca tcactacatg
    17641 ggcctgccgg acctgtctgc attcgccctg agcggtttcc cgttcacccg catggccgac
    17701 ctgtccgaga ccgtcgtgct ggtgccgccc gctgccagcg aggcgcaggt cagcctgctg
    17761 ctgaacctgg tgggcggcct gggcgtgcag accggctacc ccgcctacgg cctgcgcctg
    17821 tccgatgact ggaagcaggc cagcgcgctc gatgcggacc tgttgatgct gggcgcattg
    17881 ccggccgagt tgcgcggcag ccaacagctt tcgctgctga tcgatgacca gcgcacgcgg
    17941 ctgttgaacg gccagtcgcc ttcgccgcag caggcgatgg agcaggcacg acgtggcagc
    18001 cgtgatggcg acccggcggt gaccgaggtt gcggtgaccg cgcaggcacc gtttgccgcg
    18061 atcatcggca tgcagtcgcc gcatcatgcc cagcgcagca tcgtctcgct ggccgccagc
    18121 aatgccgcgg actatggcct gctcgacgac gcgctcagcg ataccggcaa gcgcgaggcg
    18181 attgccggct cggtggcgat tctgcgcacg tccggcatcc acagccagtt cgtgggtgag
    18241 cactactacg ttggcgcgct gccgtggtgg ctgctgctgt ggtaccacct ggccgaccat
    18301 cccgcattgc tggcggtgct ggccaccctg gtggtgctga tgttcgcctt cctgctgtgg
    18361 cgcacgctgc gctgggtggc cgccaagcgc ctggatccgg ggcactgatg gcgcgcacgc
    18421 ggcacccgct ggtgacggcg tcggggctgg tcctgctggg actggccggt gccggcccgt
    18481 gcgcggcgca ggcgttgccg gccacaccgg gtggcacggt ggccgagcaa cgccagtggc
    18541 tgctgcagca ggtgcgcatc ggcgaggcca ccggccgcca gagcctgatc gaagacgcgt
    18601 tggcgcggct gcggatgctg gcaccggatg atcgcggcac gttggtggcg atcctggaag
    18661 tgcagttgtc gcagcagaag ctggacgatg ccgaagccac gctggcacgg ctgcgccaga
    18721 tcggcgcagg cagccgcgag ctggcggccg gcgaacgcct gtggcaggcc tatcgcggcg
    18781 accttcagca ggaactgcag caggcccgcc tgttcgccgc cggtggtcgc agcgaggaag
    18841 cactggcgat ctaccggcgc ctgttcaacg acgacccgcc gggcctgcag ctgggcctgg
    18901 aatactggcg gcttcgcggt acccaggccg aaggccgtgc accggcgatc cgtgcgctca
    18961 ccgagctgga tcgcagctac ccgggcaatg tcaccctgct gcaggcactg tcgcagctgc
    19021 tgttcgctgc gggccgcgac agcgaggcac tggcggcgct gcaacgcatg gggcgcaacc
    19081 cggaagcgcg cggcatggcc gccgacgccg aatgggccta tctgaaggag caggctgccg
    19141 acgagcgcag cgtgcgccgc ctgcaggact tcatcacccg caatcccacg tttaccgaca
    19201 tcgcactggt gcgcgagcgc tacgcggacc agcacaagcg ggtcagtgac ccggcctggc
    19261 gtgccgggct gcgcggccag caactgctgg acgcgggccg caatgaagac gccgagcgcg
    19321 ccttcctgca ggcgctgcga ggctatccac gcgagccagg cctgcttggc gggttgggca
    19381 tggcgttgat gcgccagggc cgccgcgagc aggccatcac ctacttccag cgcgcggtgc
    19441 aggcgacacc ggccggcgac agcaatgaca aatggcgcga cctgatcgcc agcacccgct
    19501 actggctgca gctggaccag gccgatgccg cgctgaaggc gggccgcctg gacgacgccg
    19561 agcgcctgta cgcgcaggca cggcggcagc agccgcgcga cgtcaatgcc gcgctggggc
    19621 tggtcgacgt tgccgtcgcg cgcggtgacg atgcggctgc cgaacgccag ctgcagagcg
    19681 cgcggcggat cgcgcccaac gatgccaacg tggtgcgcaa gctggtgcag ctgtatggcc
    19741 gcaccgatcc gcagcggctg gaggccttca tcaacgcgct gcctgccgca cagcgcaagc
    19801 tgtatgccga agacctgcgc cagctgcaga tcacgcggct gcgcgagcgc cgcgagcagg
    19861 cgctggccgc cggtgacgcc gccaccgcca tcgaactggg aacgcagctg cgcgcggaac
    19921 tgcctgatga tgcctggctg gcctatgccc tcggcaacga gctgcgtgcg gcgggccggg
    19981 agcaggaggc cgatgccgtg gtggccgaca tggcccggcg caacggcagt gcagaggcgc
    20041 gctatgcgca ggcgctgtac ctgtccgggt ccgatcgcct gccgcaggcg ctggccgtgc
    20101 tcgatgcatt gccccaggcg cagtgggacg atgacatacg cgcgctgtcg gcacgcctgc
    20161 accgtcagca gctgaccgac catctttggg agctgcgcgc gcagggcagg gaggccgagg
    20221 ccatcgccct gctgctgcag caaccgccca gcaccgacaa cgacatgctg ctggccgagt
    20281 gggcccgcct gcgcggtgat cacgcgcagg ctctgcacta ctaccagcgc gtgctggccg
    20341 cgcagccgga caacgtcgat gcgcagctgg gccggatcca ggcctggatc ggcagcggcg
    20401 acctggccag cgcacgccgc cagatgcagg atgcaccgcc ccaggttgcc gatgaggcga
    20461 cggggcagca gcgccagctc gccaccatct ggaccgacct gcgcgaggac gcgaaggcgc
    20521 ttgcgatcct gcgtgcgctg ctggcacgca ggaccgcgcc cgatgcacag tcctggcgcg
    20581 acgcggcacg gctggtccgc cgtgacgatc cgcagcaggc gttggacatg tacgcgcagg
    20641 cgatggctga caatgggctg ctggcaccgg cacaggcagc accgcgcgac aaccgcgcgc
    20701 tgacgctggc cagccgcgag accgcaggcg acgactggct gcgtcgcagc ctgcgcagtg
    20761 atgtcgaaac cctgtaccag caggagaatc ccaccctgac cgtgatgcag gatacggggc
    20821 gccgcagcga tggcacgccg ggcatctcgc ggctgtcgcg tgatacccgc atcgcgcacc
    20881 tcgacgcgcc gttcgccggc gggctgggct gggcgcgcat cgagcaggtg cagttcgatg
    20941 ccggtcgctt ccaaactaat gccaacggcg cctacgacga agacttcggc agctgcgatc
    21001 tggacctgat ccaggccgac ggcacgcgcc tgcgtgcacc gggctgcacc cggttcgtgc
    21061 atcagcaacg cacgtccggt gccggcttcg ccgtcggttg gcgcacgctg gacgatcgct
    21121 ggaatttcga tatcggccac acgccgtcca actatgcggt cggcaactgg ctcggcggcc
    21181 ttaccttcaa tggagacctg ggccgtttcg gctggggagc caccgtatcg cggcggccga
    21241 tgaccaattc gctgctgtcg caggccggtg catacgaccc gcgcagcggc atccgctggg
    21301 gcggtgtcac cgccaatggc ctgaccttca gcctgggcta cgaccagggc ggccgcaatg
    21361 gcgtctggtc gaactggagc tggcatcgcc tgaccggcga gaacgtggtg gacaacacgc
    21421 gcgcccgtgc gatggttggc tggtaccaca agctgatcca gcgcaccgac atgcgcctgg
    21481 atgtcggtac caccgcgatg tactggcgtt accagaagga tctgggcggt tactcgctgg
    21541 gccagggcgg ctattacagc ccgcagcgct acgcatcgct gagcctgccg gtcagcttcg
    21601 cctggcgcaa cgacaactgg tcggtacgcc tggacggatc ggtcagcgtg tccagcgcgc
    21661 ggacgacctc tatcagccgt tacccggacc aggcgctgat cgaacgcgtg atcgcccagc
    21721 tggaaccgca gtacggcccg ctgacactgg accaggcggg cctgtacacc ggcgacagca
    21781 agagcaccgg taccggctac cgcctgtacg gtgcggtgga gcgccggctg ggtgaccact
    21841 tcgtgctcgg cgccgccggt accctgcagc gcagccgcga cttctcgccg aactcgttcc
    21901 agctctacct gcgctatacc ttcaaaccct ggcagggcaa cctgccgttg ccggtctctc
    21961 cgttggtgcc ctatggcgaa ttccgctgac ctgcaccgcc ggcgcctgct gcaggcggcc
    22021 gtggccgtgc cgttgctcgg ctggggtgcc gcgcaggcgc aaccggcgcc atcggcatcg
    22081 cgctggcctg cgtggcaggt gctgctcgac agcagcctga gccgcgacgg gcgcatgatt
    22141 gatcgcagcc aggatgatca gcgcagcacc tccgaagggc agtcctatgc actgttcttt
    22201 gcgctggtgg ccaacgacca ggccctgttc gatcgcatcc tggcctggac gcaggacaac
    22261 ctggccggcg gtgacatgcg ccagcacctg ccggcctggt tgtggggacg ggatgccaag
    22321 ggggactggc aggtactgga cagcaaccct gcctctgact cggatctgtg gctggcctat
    22381 gcgctgctgg aaggtgcgcg cctgtggcgg cgtccggcgt tgcaggccat cgccgaaggc
    22441 atgctgcagc aggtgcgcgc gcgcgagatc gtgcagttgc cggggctggg gccgatgctg
    22501 ctgcccggcc cgcagggctt cgtcgaaggc gatgcgaccc gcatcaatcc cagctatctg
    22561 ccgttgccgc tgctgcgacg gtttgcatcg gttgaccgca agggaccgtg gccggcattg
    22621 gcggcaaaca cggtgcggat gctgcagcag agcagcccgc acggattcgc gccggactgg
    22681 acggcctggc aggccggcgg tttcgtggcc gacccggtga agggggcggt cggcagctac
    22741 gatgcgatcc gctgctacgc ctgggcgggc atgacggcgc cgcgcgatcc gctgttccgg
    22801 ccgcagctgg ctgcgttgtc cggcccgctg cagcgcctgc gcagcggcgc cgccatgtgg
    22861 gaaaagatcg acacccgcag cgggcagggg cagggcgaag gcaattacgg cttccgcgcg
    22921 gcgttgctgc cgtatctgct ggcccaggga gaaaacgagc gcgcccgtgc actgcaggcc
    22981 agcctgccca gcgccgagca gcagcgcgcc gatgccccgg cgtactactc gcagatgctc
    23041 agcctgttcg ggctgggctg ggccgaaggc cgctggcgct tcaacgcaga cggcaggctg
    23101 cagctgcgct ggtgagccgc gcgcgctgca gtgccgggtg catgccggcg ccgcttactc
    23161 cagcgcgtag cgcagggtga acagcaccgc caccagccac accgccgggt gcacttcgcg
    23221 ccagcggccg gtgcccgcct tcagtgcggc gtaggcgatg aagccgaacg ccaggccgtt
    23281 ggcaatcgaa taggtgaacg gcatcgccag cgcacacagc gcggccggca ccgattcggt
    23341 caagtcgctc cagtccactt ccaccagttc gcgcagcatc aatccggcca cgaacagcag
    23401 cgccggcgca gtggcatagc tgggcaccat cgccgccagc ggcgagaaca gcagcgcggc
    23461 caggaacaac gccgacacca ccagcgcggt caggccggtg cggccgccca cctgcacgcc
    23521 cgaggcgctt tcggcgaagg cggtggtgct gctggtgccg agcaacgaac cggcgacgat
    23581 cgccgtgctg tcggccagca gtgcacgacc gaaacgcttc tgtgcgcccg gcagcttcag
    23641 caggccggcg cggccgacca cgccatacaa cgtgccggtg gcatcgaaca cttccaccag
    23701 cacgaacacc agcaccacct gcagcagcac cgcgatcggc gcgccgccgt cgtggtgcag
    23761 caggcccggc aggtccagct gaaggaaggt cggggccagg ctcggtggca gcgacaccag
    23821 gccctggtac tgcacatcac ccagtgccca gcctgcggcc gtcaccgcca ggatgccgat
    23881 caggatcgcg ccacggatgc ggcgtgcttc cagcaccgcg atcagcagga agccggccag
    23941 tgccagcagc ggcggcgcgg tgttcaacgg gcccagcgcc accagcgtgt cttcattgcc
    24001 gacgatcacg ccggatttct gcagcgcgat gatcgccagg aacaggccga tgccggccac
    24061 gatcgccgaa cgcagtgatg ccggaatgcc cgataccagc cacgcgcgca cgccggtcag
    24121 cgacagcacc aggaacacca ggccggagat gaacaccgca cccagcgcct gctgccacgg
    24181 caggccggca gcgccgacca cggtgaaggc aaagaacgcg ttcaggccca tgcccggtgc
    24241 catgccaacc gggaagttgg cggccagtgc catcaccgcc gaacccagcg cggcggccag
    24301 gcaggtggcc acgaacactg caccggcatc catgccggtg gtgccgagga tctcggggtt
    24361 cacgaagacg atgtaggaca tcgtcaggaa ggtggtgaca ccggccagca gctcggtgcg
    24421 cacggtggtg ccgtgctgct gcagctggaa caggcgttcg aacaggggca tcgcagatct
    24481 ctcatgcctg cgcgccctgc cgcccgaagg tgccgcaggt gcgtcgtcag gcggttagaa
    24541 gtggtagttc aacttcagcg tagcgctgct gtagtcggta tggaagctgc ggcgggccgc
    24601 ggccgggtag ttgggatcgt cgagcgtcac cgggctggaa cccaggtggg tgtagcggta
    24661 ctcggcaccg gcggaaagcc ggtcgttgaa gcggtacagc acgcctgccg tggcgttggc
    24721 gccggtggac aggtgcgagg cacgggtctc gaactcagcc acgcggcagc cgttggtggc
    24781 ttccaccagc gatttgtcgc agcccagcgt gaatgcctgc tgggccactg tcacgccggc
    24841 gccgaggtag ggcagccagc gacccatcgc tcggcccagc gtcacatcga aggtgcccga
    24901 acgggtcacc gcatccttgc cgtagtacgg gctgtaccgg tgctgctcgc gatccttcca
    24961 gtcacgcgtg atgttgccga acgacagcgc gccttcaacg ccgaccacga tgttgttgtc
    25021 gaactgccag cgacgcccac cctgcacgcc gccactgaag ccgcgcacgc tcttttccga
    25081 ggcgctggca ttgctgcggt ccttgctgtg cccctcgcca tgcgaggcct gcgcacccag
    25141 gtagaagccg tcccagtcag gggtggcggc cgtggcagtg cccgacagca gcagggcggc
    25201 cgtggtgatg atcagagttt tcattgcggt ttcctacgtt gggggatgaa gcggggcgta
    25261 ggaaacccga tgagcgcggg cggaaacata caaagagttg caaagtgcgg tgggtgccgg
    25321 gtgcagcaag gccggttgag ggcgaggcgg tccagcgtgg ctggagccgg tgggccaggg
    25381 cggctgaaaa cgacaatgcg tggcgatagg tcctcttgaa tgacgaaagg ccgcgcgagc
    25441 gcggcctttc gtttcctgca ggaaccgtta cttcagcgcc ttgaagcgca ggcgcttcgg
    25501 cgcagcgtcg tcgcccatgc ggcggcgctt gtcttcttcg tactcgcggt agttgccctg
    25561 gaagaactcc acgtgcgagt cgccttcgaa cgccaggatg tgggtcgcga tgcgatccag
    25621 gaaccagcgg tcatgcgaga tgacgaaggt gttgcccggg aactccagca gcgcatcttc
    25681 cagcgcacgc agggtttcga tgtccaggtc gttggacggt tcgtcgagca gcagcacgtt
    25741 gccaccctgc agcagggtct tggccatgtg caggcggcca cgctcaccac cggacagcga
    25801 accgaccatc ttctgctggt cctggccctt gaagttgaag cggccgatgt aggcgcgcga
    25861 ctggatctcg atgccgttga tgttgaggat gtccaggccg cccgcgattt cctggaagac
    25921 gttgtggttg ccttccagcg cgtcgcggct ctggtccacg taggacagct tcacggtcgg
    25981 gccgaccacg atctcgccgg tatccggctt ttcctggccg gtgatcatct tgaacagggt
    26041 cgacttaccg gcaccgttgg ggccgatgat gccgacgatg gcgccggccg gcaccaggaa
    26101 gctcaggttg tcgaacagca ggcggtcgcc gaacttcttg gagacgttct tgaactccat
    26161 caccgcattg cccaggcgct cgcccggcgg gatgaagatt tcattggtct cgttgcgctt
    26221 ctggtaatcg accgactgca gctcttccag gcgggccagg cgggccttgc ccttggtgcg
    26281 gccgcccttg gcgttctggc gcgaccattc cagttccttc tggatcgcct tctggcgggc
    26341 cttttcctgg ttgtcttcct gcttcaggcg ctcgtccttc tgggtcagcc agtcggtgta
    26401 gttgcccttc cacggaatgc cgcggccgcg gtccagttcc aggatccact cggcggcgtt
    26461 gtccaggaag tagcgatcat gggtgaccgc cacgacggtg ccggtgtagc gcgccaggaa
    26521 ctgttccagc cactccaccg actcggcgtc gaggtggttg gtcggttcgt cgagcagcag
    26581 catgtccggc ttctgcagca gcaggcggca cagcgccacg cggcgcttct caccaccgga
    26641 cagcttgccg accaccgcat cccacggcgg caggcgcagc gcatcggcgg ccacgtccag
    26701 ctggttttcc agggtgtgcg cgtcgccggc ggccaggatc gcctccaggc gttcctgttc
    26761 cttggccagc gcgtcgaagt cggcgccttc ctcggcatag gccaggtaca ccgcgtccag
    26821 cgcggcctgg gcctgcagca cttcgcccac gccttcctcg accgcttcac gcacggtctt
    26881 ggtcgggtcc agttccggtt cctgcgccag gtagccgacc ttgatgcccg gctgcgggcg
    26941 ggcttcgccc tcgaaatcgg tgtccacgcc ggccatgatc ttcagcacgg tggacttgcc
    27001 ggcgccgttc aggcccagca ggccgatctt cgcgcccggg aagaaggaca gcgagatgtc
    27061 cttgatgatc tgccgcttgg gcgggaccac cttggacacg cggttcatgg tgtatatgta
    27121 ttgcgaggac atgaggtctc cgtaggcgcg gccctgcgcc cggtccgtca cgggaacatc
    27181 ccgttgcggc agcgggcaca gactgaaaag gtgtactgct aattatagcc ggaaccggtt
    27241 ccgggccgcg ccgggcaggg ggcgccgggc tggctatcgc ctgaataccc ggtcacagtc
    27301 ctgaaacggg aagcgtttcc agctggaaac ggttcagatc aagtgcgcaa tatgggctca
    27361 ccaccaccca ctcaagcaga ggtctgacat gcgcatcaat cgagtaatgg ccggcgccgt
    27421 ggcctctgtg ctggcgttgg gtgccgtcgc cccggccttc gccgacaacg accaccgcga
    27481 ccgccgtgag tggcgcgaag accgccgcga gtggcgccag gatcgccgcg actgggagcg
    27541 cgaccgccgc gaggcccgcc gcgactggga gcgtgaccgc cgcgactggc accgcgacca
    27601 cgaccgctac taccgcccgg caccgccgcg ggtggtctat cggccggcac cgccgccgcg
    27661 ctatggcagc tacggctggc gcgtcggctc gccctatcgc aactactact ccggcccggt
    27721 ctacgtggtg aatgactacc cgcgctacca cctgcgccgc ccgccctatg gccaccactg
    27781 gatccgcgat gaccgcggca acatgctgct ggtggccatc gccaccggcg tgatcgccca
    27841 gtacgtgctc agcgggcgct gagccgacgg tctggtccac gcatggcgtg gcgtggctga
    27901 tacggcaggc gaaaccatac ggggccggat tccttcgggg atgccggccc cgtccgtttc
    27961 ggccccagca ggccggtgcg gggctacaat cgagggctga gtcgtacccc ctttccctgc
    28021 ctgctggagt acccgatgtt cccgcgtgac gtccgcatcg aatcctacga tcccgaactg
    28081 gccaaggcca ttgccgctga gacccagcgc caggaagacc acgtcgagct gatcgccagc
    28141 gagaactaca ccagcccggc ggtgatggag gcccagggca gccagctgac caacaagtac
    28201 gccgaaggct acccgggcaa gcgctactac ggtggctgcg aatacgtgga catcgccgag
    28261 cagctggcca tcgaccgcct caagcagctg ttcggtgccg actacgccaa tgtgcagccg
    28321 cacagcggct cgcaggccaa ccaggccgtg tacttcgccc tgctgcagcc gggcgacacc
    28381 atcctcggca tgagcctggc ccacggtggt cacctcaccc acggtgccaa ggtgaatgct
    28441 tccggcaagc tgttcaacgc cgtgcagtac ggcgtgaacg accagggcct gatcgattac
    28501 gacgaagtcg agcgcctggc cctggagcac aagccgaaga tggtcgtggc tggcttctcg
    28561 gcctactcgc aggtgatcga ctgggcgcgc ttccgcgcca tcgccgacaa ggtcggtgcc
    28621 tacctgttcg tcgacatggc ccacgtggcc ggcctggtcg ccgctggcgt ctacccgagc
    28681 ccgctggaac acgcccacgt ggtcacctcg accacccaca agaccctgcg cggcccgcgc
    28741 ggcggcatca tcgtcgccaa gggcgccgac gaagacctgg tcaagaagct gcagtcgatc
    28801 gtgttcccgg gcatccaggg cggtccgctg atgcacgtca tcgccggcaa ggccgtggcc
    28861 ttcaaggaag cgctggagcc gggcttcaag gcctaccagc agcaggtggt gaagaacgcc
    28921 caggcgatgg ccaacacgct catcgcacgt ggctacaaga tcgtttccgg cggcacccag
    28981 aaccacctga tgctggtcga catgatcggc aaggacgtgt ccggcaagga cgcggaagcc
    29041 gcgctgggca aggcccacat caccgtcaac aagaactcgg tgccgaacga cccgcgttcg
    29101 ccgttcgtga cctcgggcct gcgcctgggc accccggcgg tgaccacccg cggttacgtc
    29161 gagcaggatt gcgtggacct ggccaactgg atcgccgacg tgctcgatgc accggccgat
    29221 gaagcggtca tcgcccgcgt gcgcgacgcg gtcagcgcgc agtgccgcaa gtatccggtc
    29281 tacggctgac cggtcccgtg gggtcggaac ccttcccgcg ggaagggctc tgaccccggc
    29341 atcggagcac ccgcgcatgg acgagcgccg cctcaagtac ctgtatgccg ctcttgcggc
    29401 ggtgttcggc ctgcccagcc tgttgatggg cggcgcggcg gcgacgatgc tgctgctgat
    29461 ggggctgggc cagttcggcc atggcacctt ggcctcggtg accgtgatgc cgctgtgggg
    29521 cctggccggc attgccggct gcctggcctg gctgtggctc agcgcgggct atctgctgca
    29581 ggggcgggcc ggactgcagg tgcgcgcggt gtggtggtgg ctgctgctgg ccggtggcct
    29641 ggccgcacta ccggtcatct ggctggccgc gtggatcgga tggcaggagg tcggctcggc
    29701 gttggaagtg ctgatgctgg gcccgtcgct gctggtgccg gccgcgatgc tggtgtggct
    29761 caaacgccgc gcatgatgag gcccatggaa ggagaccgga tgcatggatg agcatctgca
    29821 caaacggatg gttgcggtgg gcggtctcgt gcttggcctg cctgcacttg ctgccggcgg
    29881 aaccgtcgcg gtgctggggc tgatggtcgc gatggacggc aagtacctgt ctggcaacga
    29941 acccacgttg ctgctgctgt ggtcgctggg cgggatcatc ggcctgctgt catggctgtg
    30001 gctgagcggt gtattcctgc ggcgcggccg tgatggcctg cggcaatcgt cgccggcggc
    30061 gtgggtgggc ttgctgctgg gcgtcctggc cgcgctggct gtggtcgccg tcacgctgca
    30121 tctggtgttc aaggacggcg aattcgcgct gctgagctac ctgggcctgg ggccgccgtt
    30181 cctgctgccg gccgcacatc tggcgtggtt gcgctggggg acgtgagccg gctatccgtg
    30241 cgctgatttt taagacaagt tgcatggtag tgggcgcgcg ccctgcctaa gctcccagcg
    30301 gtcttcacgg ttgggatacc ccatgaatcc gctgggtcgc cttacgcacg tcaggttgcg
    30361 gtggcatctg ttgctgtttt ccattccgtg cgcgttggtt ggcgtgctgg ccacatgcgc
    30421 gctcttcatg gtgtggctcg ccaggccgca gccacccgaa gcgttcctga tggctgccgc
    30481 caactgggtg gtgatgtcgg tctggagcgc ctatgcaact gtagtgctgg gcgacagctg
    30541 gcggactgcg ggtatggaag ggctacattc gcatgcgggc tgcctggcgg cgctgcccat
    30601 cgtttctgcg ttccaggcca ctgcggcggt ggcgatgctg ttcacggcca ttgggtggga
    30661 gccagcagct ctgctgtata cccccttcct gatgactatc tgcgctccgt gggccagttt
    30721 gagctggcat atgcggtggc tttcaaggca ggaggagtaa agccttcggg gcacatgtcg
    30781 tcattgccgc tgggacggca cgacccgcgg tttcaaagaa attgcatggt ttgctgggga
    30841 aagccggcct aggtttcctg catggacacc ccaatgcgca ccgtgcgccg tcgacacggc
    30901 ctctatctgc ttcttcatag cttgtttttc tccattccct gcgcattggc tggcttggcg
    30961 ggcctgctag tgctgctgtg gggatgggca catggcagcg gtaagggagc atttctcgca
    31021 tggggtgcgg cttggggtgt gctgtccgtg gcagcgtgca ttcttgttgt ctggctggca
    31081 aatacatggc agatgcgtgg accggacgga ttgaaagcgg ccgcgccaat gctggtggcg
    31141 ctgtttctgc tgtctgccgc tcaggttgtg tccgcattga tcatgacggt cccgggcttt
    31201 ggatgggagc cgaatctgct ggtgttggcg atgggttggg gagctccctg gctcagcctt
    31261 gcctgccact tccgatggct ggcaaagggc ggcgggcctg agtgaagaag cgcggagatt
    31321 gctgctgcgc cccttctcag gtacctttgc gacgctgcca cgaccgtggc cgcaggtctt
    31381 ctcgcgagcc aggcgttcca tgtattgccc cttctgccag catgccgata cccgggtcat
    31441 cgactcgcgc gtctccgaag acggcgcgac gatccgtcgt cggcgtgagt gcgaggcctg
    31501 caacgaacgc ttcagcacgt tggaaacggt cgagctgaag ctgccggcca tcgtcaagag
    31561 tgatggcacc cgcgaggcct tcgaccagcg caaggtccgc gccggcttcg accgcgcgct
    31621 gcagaagcgc gccgtgcccg aagagaaaat cgaagcagcg gtgcgcgccg tggtccacca
    31681 gctgcgcatc agtggcgaac gcgaagtgcc ttccatcaag gtcggcgagt tcgtgatgaa
    31741 cgaactgcgc aagctcgacc atgtgggtta cgtgcgtttc gcctcggtgt accgcagctt
    31801 cgaggatgtg gccgatttcc gcgaggagat cgagaagctg gagcgtgagc tgccttccag
    31861 caccgaacag ctgcagctgc tgggcgatgt gatcgccctg accaagaaga agaagggctg
    31921 acgccctggt gggtgccaac cttggttggc acagagaccg catggcatgg atccacgctg
    31981 gcggcgttac catggtggca tgaccacccc gttctccgtc ctcgaccacc tgcacatggc
    32041 caacgcgttg cgtctggccg agcgcggtgc ctacaccacc cgtcccaacc cgatggttgg
    32101 ctgcgtcatc gcccatggtg aacgcgtggt cgggcagggt tggcaccagc gtgccggtgg
    32161 gccgcatgcc gaagtattcg cgctgcgcga ggccggcagc gaagcgcgcg gtgccaccgc
    32221 ctacgtcacg ctggaaccct gcgcgcacta cgggcgtaca ccgccctgcg ccctggccct
    32281 gattgaggct ggcgtatcgc gcgtggtcgc ggcgatgcgc gatccgttcc cgaaggtcga
    32341 tggtggtggc ttcgatctgc tgcgcgaggc aggcatcgac gtagccgagg gtttgatggc
    32401 cacgcaggcc cgcgagctca acaagggctt cctgtcgcgc gtggagcgca accgtccgtg
    32461 gctgcgggtg aagctggccg ccagcctgga tggccgcacc gcgatggccg acggcacatc
    32521 gaagtggatc accggcgcgg cggcgcgcga agacgtgcag cactggcgcg cccgtgcggg
    32581 cgccatcctc accggcgccg acaccgtgct gaccgacgac ccgatgctga ccgtgcgcct
    32641 ggccgatgcc gaagtgatgc caccgctgcg cgtcgtactc gattcgcgcc tgcggtcgct
    32701 ggaatgcagc cgcgtgcgcg agggcggggc acccacgctg tacctgcaca acgcggttgt
    32761 cagcccccct gatgcggccg acgccgcgtt cgccagcgtg gcgctgcgcc atgggcatct
    32821 cgatctgggc gcggtactgg cgctgctggc cgagcgcggc atcaacgaag tgcacaccga
    32881 agcgggcgcg accctggctg gcgcgctgct gcgcggtggc tgggtagacg aactgctgct
    32941 gtacctggcg cccacgttgc tgggtgacag tggccgcccg ttgctggctg gcctcggcat
    33001 cgacgcgatg gaccagcagc gccgcctgcg cgtggtcgat cagcgccagg tgggcgagga
    33061 cctgcggttg ctgctgcgcg cgtaatgctc tggtaggtgc cgaccttggt cggcactgag
    33121 gcctctactc cgcatcccgc tccatctcag caaaaggatc cacccgttct gctggtagtg
    33181 ccgagtacag cactgatgtc agggatctca ggttgtaggc gtcggggaaa taaccggtat
    33241 caggatctcc agtcagcatc gcctcacccg tcatcgtgcg cttctcgccg cttttgagca
    33301 ttgccgccca tgtgcggaag gcatatttcg tgcttttgcg catctttctc agaatggccg
    33361 catccgtcac ctcaccgctc tcagtgttga aagccggcac ctggcagctg aactgcacca
    33421 tgatctccgt gactttctct ttttcccgca aatactgcga agccgctcgt gtccccgttg
    33481 ccctgcattg ggtgcctgca tacgcgtcgg tcatcaacgt gccgtactca tgggcggact
    33541 tggcagagaa gagtttgaac tggaccagcc agtctaccat tgactggaca agtgccggag
    33601 catactgatg caggtccgct accgattccg tctcgtagtg attgatgtcc accattgagc
    33661 gatgcagctt tgcactcgca tcggcgtcac tttccagtac cgccttggta aaaagctcga
    33721 acgcctgttc ggggctgatc gagggctctg ccgcagcatg cccggcaact gcgatgcaca
    33781 gagcgagggg aacgcacagt gttcgcatga ttgccctggc aacaggcagg gcgacgtgcg
    33841 tgttgggtgc gctggcctga tcctgttggc tgacatcagc ggtccgggcg gctgtcatgg
    33901 ctgaccctgc gatcgggtgt gaccggccag caacagcatc ggcatcgtgg actggatcag
    33961 cggagtaagc agcgcttgcc catcgacgaa aaagtagttg ccgtttgcat cagccgtgag
    34021 agtgacggta tcggtaatcg agcgtcgggg cagcgttggc accgtggttg taatcagccc
    34081 ataggcgaat gatgcgtcgg ccctcattct gctgatgact tcgtcggtca acggaggtgc
    34141 cgccgcgtcc cagtccggaa cctggcagcg gaatgacaac gtcacctgct ggaggccctg
    34201 cgcgctttca ttgacaggca ctgccgacgt cgcacggcag tggctgcgca ggtacgtcga
    34261 cctgatcact tcgccgagcg gcgcggcgaa ctcgggcggg atgtcgtcgt cgatctcgcc
    34321 cttcgcaagc gcctcaacca tttctggcac gaggcgcgca gccttgactg cgagcggggc
    34381 gtcgccatgc tgggcagcgt gcatggcacg gtggagggtg tcgcccgcct cagcatcact
    34441 ttcaagcagt gccctggcaa acaggtcgaa cgcctgctca gggctgagct ttccggtcgg
    34501 cgttgcatgt gaagcaaagg ggatgaagag caggagcagg aggcacggaa tccgcattgg
    34561 aacgtcccgt tggaaggact gccagcctca cctcggaatc gggcaggatc catgcaataa
    34621 gtacgaaagg catggcctgt ggccgctggc caggcgcggc atcaacgagg tggaggccga
    34681 ggcgcagacg cctctgcctg tggcgctttg ccgctctgcg gccaggtcac gacgttgaag
    34741 tggaaccatg cctccacatc gccgccggtg tcgcggccgt cgcggtgtgc gggcagatag
    34801 caccagtccc tggcagcggc catcgccgcc tcggcaagct ggggatggcc gctggactcc
    34861 agtacacgga ttccggccag tcggccagtg gcctccaccc gcatctgcag gtgtaccttg
    34921 ccgctgctgc gcaccctgtc gggaaaacgc gccgggtggg cagcctgggt cgtgggttcg
    34981 atcgccaccg agtcaccccg ctgggtgaac acactgcagt cagctcgtgc tgtgaatacc
    35041 ttgcgcgggg gagaggcgta ccgtcgcagg caggccacga tgtcgtcatc ctccgtgcag
    35101 cgcggggcat cggtctgcag cctgctgcgt gcaggctcgc gcgcgacgtc gctgtccgct
    35161 tgctgcaggc aggcggttaa cgcaaacagc gctggtagaa gtccagtcca tcgcgcgtta
    35221 ggtggcatga ccatctccgg tatgagcctt ccaggcgtgg gtgtgttcat gggcatcctg
    35281 gcagagcgtg acggcgaccg ctgtggcgaa tagaggcatg tacagggcaa ggcagtgctg
    35341 tgaatcgatc aggcagcatg cagcgacgaa ttccacttga ccatgcaaca cgtctgaaaa
    35401 tgaccgggcg acgtcacgcc gatcttgatg ccgttatttg caacaatctt catatcaaac
    35461 cgtgcactac gcacgcacag tcaccggctg tctcccgtcg gtgactgtca tgccgcaccc
    35521 aaaccgcaat ctgctgcttt cggcgctgct tctgctcggc gtgtcagctt cgcctgtcgt
    35581 gtccgcagat gaggaagcgc cggctcccgc gcgtgccttc acacaggcac aggccctgca
    35641 ggacctgacc gccatcatcg aatgccgtgc gcctgcttcg gtgccgaagc agttgtcgcc
    35701 ccacttgtgg gcggtcgcgt tgggcaacga ggtcgcacgc ccattcgata catgggctgt
    35761 tgtcgagcag cccaacgcgt cactgcacga ggtggccctg cccgaaccga tcacggtgtt
    35821 cggtcactca accaggcgca ttgctgttct ttccgaggca gtgatggcaa tcatcgaggg
    35881 cgtcacgctg gaggagatgt cgcgtcagct ggagctgcgg ccactgagtg caacggtggc
    35941 gccgcacatc cacgtgcggg agctgtcact tcgcaacagg ggcgacatcg gattccaggt
    36001 acgctcgctg accgcatcgc gcatttccag ccaccccaat gcggtgctgc tcggttgtga
    36061 ggaccgctac gacacacgca tggagcagtt gcgcaggcgc ggcaaggaac ctgacgtggt
    36121 gtttgcttcg ggggtggatg ttgccaccga gctcgatgac gtgctgacct gcagggccga
    36181 tgcgctgcgc aactacacgg cgggctgggc ggtaggcatg tcagcgcaca ccactgacgc
    36241 gcgcttcaag ggctggaagg atggggagga caaagagggc tatcgctggt ggacgccgcc
    36301 ggcgccggtg atgatcgccg gcaggcccgt ctcacgcttc gtgaaggtgg gcttgaccct
    36361 gtacgcggaa ctcgacggag acatcgcccc ggcgctggca gaagaatggg ctcttccctc
    36421 ttacgatggc tgggacgaaa ccgcctttgt cggcttccac gataccgaca ccgctgccga
    36481 cgggtggctg gaagaccgcg cgcgcatcgt acgtgcctgg ggacagggca agaccctgca
    36541 cggctgcgag taccagcaga atcgtccgga gttcggcgaa catgcggacg acgatgacga
    36601 agcatgacgg caacggggaa tcgccgggca gtgcccggcg ttaccagctc acgcgcacgc
    36661 gtcggtccac atcatctcgg cgatcgggcg cagagccttg cactcctgcg tcatttcatc
    36721 ggccgattgc acctgtgcct tggccttcag ttcctcggcc atcgcgtcca cgccgctgat
    36781 ctggtccggg gcgatcttcg ccacgcagct gcggtgctgc tgcagcagca ggtcgcagct
    36841 gggcacgccg gtcaccttcg gtgcgctggc ggcttgggca tcttcactcc actgctcgaa
    36901 cggcgcgagt gcatccagca ccgggctgat cagcatatcg aagctgccag tgaaccagta
    36961 cgcctgctct gcgctggagt acatcttgtg gctgcccttc accgtgcgcc gcgcgccgct
    37021 cttcagtgcc tgcgtgtagg catcgatgaa gcggcggcgt gcggcggggt cgtcactgct
    37081 gatgctggcg atgaacagcg ggcgcacgct gtccaggtcc accaccttgc agctgaaatc
    37141 gaccgtagcg atcttctggc cgttcacgta ctcgttgtct tcgatggtgc tgccggtggc
    37201 gcggcaggcc gatgccttca gcaccttggc gaacatctct tcggccgcgg cggcatcggg
    37261 cgtgacgccg atgctggcct gcagcgccat ccacggttcg gccagggcct tggccaccgc
    37321 gcccggcgcg agcgtcaacg cgtcctcgct gtcgggggcg ctgcgcaggg catcgttgag
    37381 cgtgcgcgcg gcagcggcat cgtcttcaat cagcacgcgt gcgtacaggt ccagcgattg
    37441 ttcgggcgtc tgcgccggcg cggcggtggt caacacaggg gcgcacagca gagcgctggc
    37501 gagcagggtg cgcaggggag tcttcatgac ggtgttccgt ttccagtggg tagtgcagag
    37561 gcgcgaaaga ctagcgcatc tgcacgcgga ttcgatggca cgggtgtgca agccatgcga
    37621 acaccgcact attcgtcctt aagcgcatcg gtcagtgctg cgggaaagac cgagaaaagc
    37681 accggggaaa gggatcgcat catgccgccg cctgggaaat atcccatctc ggcgcttcct
    37741 tccagcacgg cggtgccggt aatcgtctgc agctctgcca tgcgcagctc cgatgcgatc
    37801 agatacgtag caaacacctg atcgtcccgc agtttctgct ggatgtccgg ctcggccagc
    37861 agaccgcttt ctgtatccca caccggtacc tggcaggtga atgtgacccg cgccttcccg
    37921 cccggtgcag tttcggcaat gacctgtcca ggcactgccc ggcagtggct gctggcaaat
    37981 gttctggtga tctgggcgac catcgcctcg gtaagtgcgg ccggaacctc ctcctcatca
    38041 tcgctttgcc cggctaccgc tgcgcgcatt tccgcttcga aacgggcaag tccccgaacc
    38101 atatcggtag tccacaggct atcggcgggc agcgcgcgga ccagggcttc tgcggcttgg
    38161 gcatcgcttt ccagcagggc ccgggcatat aggtcaaagg cctgttccgg gctcagtttt
    38221 tccgcggtgg cggcctgcgc ggcaagcggc aggcacagca gcagggggag gcgataggcc
    38281 agcatcatcc atccagaagg ggaaaaagca acagcctgtg gcattggccc gccggacacc
    38341 atgcaatttg tctgaaaaga cagcccccca aaaaaacggg ccccttgcgg ggcccgttcg
    38401 atcgcacgac gaggagcgat cgttggatca gaagctggcg cgcacgccgg ccgagtactg
    38461 ggtgacgtca cggtagccgg agatctcgcc caccaggccc caggtcctgg tgaagttgat
    38521 ctggccgccc agggtgccca cccaggtgcc cttgaagttg ttgccgccgt ccatgtagcc
    38581 ggtcttgacc caggcttcgg tcttgggcga aggcttgccg cgcaggccca cggtgacgcg
    38641 gcccaggttg gtgtggtcct tgaagcgctc ggagtagccg tagtaacgat cggtcagctc
    38701 aacgttctga cgcacccagg cggcgtcggc ggtgaagtcg acgcggtcgg tccacggcat
    38761 gtggtagccg atgcccagct ccggctggtc cagttccagc ttcagcgaac cgtcgttgta
    38821 gtggtaggtc ttgcgggtac gcgaccagcc gccgaacacg tgcacctgct cggagagtgc
    38881 gaacgaaccg cgcagatagg cgccgtcgac cttggggtcg tccagtgcgt tgtcgtcaac
    38941 cttgacctgc gtccagccgc cttccacgta ggtgtagctc agggcgtcag ccgaagccga
    39001 gaagggggcg gcggccagca gagcggccac gatcaggatc ttgcgcatgg gaattcctgt
    39061 gaatttcagt ccattggcga gccggccctg cgggcggccc gtggcgacct catgtcgtcc
    39121 ggcgacggat tttaatgaaa attttacaga atgcgagctg cggggcgaag ccgtggccag
    39181 caacgcgacg ccggtcacag ctgaacgagg gatggcccgg ccctgcgcga ccccggcaag
    39241 gcggctggta cactaccggt gccggttcgc cggtacacaa acgtcttcag ggcggggtgc
    39301 aattccccac cggcggtagg tgcgcaagca cgagcccgcg agcgccccgg cccacgccgg
    39361 gggtcagcag atccggtcca atgccggagc cgacggtcat agtccggatg aaagaagacg
    39421 gtgccacagg gctcatgccc tgcgcgcgcc tgtttgcctt gcggcgtttt tcgctcactt
    39481 ttcgcggaga acgttacttg tttactggaa tcatcgaagg cgtcggccgt ctggccgcac
    39541 gcgagtccat cggcggcgat gtccgcttca ccttcaatgt cgggaatctg ccgttcgaca
    39601 acgtgcagat gggcgagagc atcgccatca acggcgtctg cctcaccgtc attgcttttg
    39661 acgccagcag cttccaggcc gatgcctcca ccgagaccct gggcctgacc acgctgggcc
    39721 agctgggcga gggcgcggtc atcaacctgg agcgcgccat gcgcccgacc gaccgcctcg
    39781 gcggccatct ggtcagcggc cacgtcgatg gcctcggcca ggtgctgtcc atccacgaag
    39841 acgcgcgcgc ccagcgctgg cgcttcgccg cgccggcctc gctgcgccgc tacatcgcca
    39901 agaagggctc gatctgcgtg gacggcgtca gcctcaccgt caacgaagtg gatgacgaag
    39961 gttttgaagt cgccctgatc ccgcacaccg tggccaacac cgccttctcc gcctcgggcg
    40021 tgggcagcgc ggtgaacctg gaaatcgacc tggtggcccg atacgtggaa aggcttgtca
    40081 gcctgccggc cagcggccgg cagctaccgt ctgaagaggg agatgccgca tgaatttcgc
    40141 cccgattccg gaaatcctgg aagagatccg cctgggccgc atggtggtca tcgtcgatga
    40201 cgaagaccgc gagaacgaag gcgacctgat catggccgcc gagctggtca agccgtcgga
    40261 catcaacttc atggtcaccc acggccgtgg cctggtgtgc ctgccgctca cccgcacccg
    40321 cgccgccgac ctcggcctgg cgccgatggt gcaggccaat accgcacagt tccagaccaa
    40381 cttcacggtc agcatcgagg ccgccgaggg tgtcaccacc ggcatctcgg cgcacgaccg
    40441 cgcccacacc atccgtactg cggtgaagcc gaatgccaag ccggccgacc tgcaccagcc
    40501 gggccacatc ttcccgctga tcgcgcagcc gggtggcgtg ctgacccgtg ccggccacac
    40561 cgaagccggc gtcgacctgg ccatgctggc cgggctggag ccggccggcg tgctggttga
    40621 gatcctgaac ccggatggca gcatggcgcg ccgtccggag ctggaagtgt tcgcccgcga
    40681 gcacggcctg aagatgggct ccatcgccga tctgattgcc taccggctgg ccaccgaaaa
    40741 gaccgtcgag cgcgtcgacg agcgcgacat cgacaccgaa ttcggcccat tcaagctggt
    40801 cacctaccgc gaccgcatcg cccacgacct gcatttcgcc ctggtccgtg gcaccccgga
    40861 tgccgaaacg ccgacgctgg tgcgtgtgca ggtggaaaac ccgctggccg acctgctgca
    40921 ctggcgccgc gacgatttcg gcgtggccgc caccgatgcc ctgcgtgcga tcgatgccga
    40981 aggcgcgggc gtgatggtgg tgctgtcggc cccgcgcgac ggcgaggccc tgctggcccg
    41041 cctgcgccag cagccggcgc cggtggtgcc gggcaaggac aaggatgtgg gccagtggcg
    41101 ccgcaacggt gccggcgcgc agatcctgtc cgacctgggc ctgggcaagc tgcgcgtgct
    41161 gggcaccccg cgccgccagg tcggcctggc cgggtacggc ctggaagtgg tggagacggt
    41221 ca
//
LOCUS       DAOKIP010000017        36239 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.017,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000017 DAOKIP010000000
VERSION     DAOKIP010000017.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 36239)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 36239)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..36239
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.017"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            <1..240
                     /locus_tag="QEL58_000789"
     CDS             <1..240
                     /locus_tag="QEL58_000789"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003486726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HDS1675302.1"
                     /translation="EGGRHTPFFNGYRPQFYFRTTDITGAAALPEGVEMVMPGDNVKM
                     VVTLINPVAMDEGLRFAIREGGRTVGAGVVSKIIE"
     gene            573..884
                     /gene="rpsJ"
                     /locus_tag="QEL58_000790"
     CDS             573..884
                     /gene="rpsJ"
                     /locus_tag="QEL58_000790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017160477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S10"
                     /protein_id="HDS1675303.1"
                     /translation="MADQKIRIRLKAFDHRLIDRSASEIVETAKRTGAQVRGPIPLPT
                     KIERYTVLVSPHVDKDARDQYETRTHKRVLDIVDPNDKTVDALMKLELAAGVDVQIKL
                     T"
     gene            896..1546
                     /gene="rplC"
                     /locus_tag="QEL58_000791"
     CDS             896..1546
                     /gene="rplC"
                     /locus_tag="QEL58_000791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011036123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3"
                     /protein_id="HDS1675304.1"
                     /translation="MTKKYSLGFVGRKAGMSRVFTEDGRSIPVTLIEATPNRIAQIKT
                     VETDGYSAVQVTVGARRAALVNKPEAGHFAKAKVEAGRGLWEFRVEDAQLGDFAVGGE
                     VKADIFEVGQIVDVQGVTKGKGFQGTIKRHNFRMGDATHGNSLSHRAPGSLGQRQTPG
                     RVFPGKKMSGHMGAVQQSTQNLEVVKVDVERGLIAVRGAVPGAAGGDVIVRPASKA"
     gene            1559..2164
                     /gene="rplD"
                     /locus_tag="QEL58_000792"
     CDS             1559..2164
                     /gene="rplD"
                     /locus_tag="QEL58_000792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010371054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L4"
                     /protein_id="HDS1675305.1"
                     /translation="MELVITGSNNKVSVSDAVFGRDFSEDLVHQVVVAYRNAGRAGTK
                     AQKTRSEVAGTTKKSKKQKGGGARHGALTAPIFVGGGVTFAAKPRSFEQKVNRKQYRA
                     AMCAILSELNRQGRLTIVESFDVEVTNTKGLIAKLAGLEVGKRPLIVTEEASEHLYLS
                     ARNLPYVQVRDVQGLDPVSLVGADTVVITADAVKKVEEWLA"
     gene            2161..2460
                     /gene="rplW"
                     /locus_tag="QEL58_000793"
     CDS             2161..2460
                     /gene="rplW"
                     /locus_tag="QEL58_000793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004145338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L23"
                     /protein_id="HDS1675306.1"
                     /translation="MNSNEKIFSVLRAPRVSEKTARLQELSNQYVFEVSNEATKADVK
                     AAVEQLFDVKVEAVNVVNVKGKNKSFRNRAGRRGDWRKAYVRLADGQSIDVTAKA"
     gene            2471..3298
                     /gene="rplB"
                     /locus_tag="QEL58_000794"
     CDS             2471..3298
                     /gene="rplB"
                     /locus_tag="QEL58_000794"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009607340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L2"
                     /protein_id="HDS1675307.1"
                     /translation="MPLMKFKPTSPGRRSAVRVVTPDLHKGAPHAALVESQSRSGGRN
                     HHGRITVRHVGGGAKQHYRIIDFKRNKLGIPARVERIEYDPNRTAHIALLCYVDGERR
                     YIIAPKGLKAGDQVIAGSDAPIKSGNTLPLRNIPVGTTIHCIELKPGKGAQIARAAGA
                     AVQLVAREGIYATLRLRSGEMRKVPVECCATIGEVGNDEHSLEKLGKAGAKRWRGVRP
                     TVRGAAMNPVDHPHGGGEAKAGQGNPHPVTPWGVPTKGYKTRHNKRTQQFIVRDRRG"
     gene            3305..3574
                     /gene="rpsS"
                     /locus_tag="QEL58_000795"
     CDS             3305..3574
                     /gene="rpsS"
                     /locus_tag="QEL58_000795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_004996805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S19"
                     /protein_id="HDS1675308.1"
                     /translation="MARSLKKGPFVDHHLVKKVEAAAGSKKPIKTWSRRSMILPDMVG
                     VTIAVHNGKNHIPVLVNENMVGHKLGEFAITRTFKGHGGDKKSGK"
     gene            3587..3922
                     /gene="rplV"
                     /locus_tag="QEL58_000796"
     CDS             3587..3922
                     /gene="rplV"
                     /locus_tag="QEL58_000796"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003486710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L22"
                     /protein_id="HDS1675309.1"
                     /translation="MEAKAILRTARISPQKARLVADQVRGLPAERAVNLLKFSDKKAA
                     HLIKKVVESAIANAENNQGADVDELKVQTIMVDEGPTLKRFMARAKGRGTRILKRTSH
                     ITVVVGAAK"
     gene            3941..4675
                     /gene="rpsC"
                     /locus_tag="QEL58_000797"
     CDS             3941..4675
                     /gene="rpsC"
                     /locus_tag="QEL58_000797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002811684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S3"
                     /protein_id="HDS1675310.1"
                     /translation="MGHKVHPIGIRLGISKDWNSKWYANKAEFAGYLAADLKVREMLR
                     KKLAQAGISKILIERPAKTARVTIHTARPGVVIGKRGEDIEKLRKEVSEMMGVPAHIN
                     VTEVRKPELDAQLVAESIAQQLERRIMFRRAMKRSVGNAMRLGALGIKVNVGGRLNGA
                     EIARSEWYREGRVPLHTLRADIDYGFAEAKTTYGIIGIKVWIYKGEVFDFSQVGQEKQ
                     DDTPSRNDRHDRGDRGDRQRPAREAR"
     gene            4681..5094
                     /gene="rplP"
                     /locus_tag="QEL58_000798"
     CDS             4681..5094
                     /gene="rplP"
                     /locus_tag="QEL58_000798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003479591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L16"
                     /protein_id="HDS1675311.1"
                     /translation="MLQPKRTKYRKVHKGRNDGLSWSANAVSFGEYGLKATAHGQLTA
                     RQIEAARRSISRYVKRGGKMWIRVFPDKPITKKPIEVRMGSGKGNVEYWVAQIQPGRM
                     IYEIEGVSEEVAREAFRLAAAKLSVTTTFVTRTVR"
     gene            5094..5279
                     /gene="rpmC"
                     /locus_tag="QEL58_000799"
     CDS             5094..5279
                     /gene="rpmC"
                     /locus_tag="QEL58_000799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004154487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L29"
                     /protein_id="HDS1675312.1"
                     /translation="MDIKTLREKSADELKAHLIDLRKEQFSVRMQQVTGQLPKTHDIR
                     RVRREIARVKTLLGSTK"
     gene            5291..5560
                     /gene="rpsQ"
                     /locus_tag="QEL58_000800"
     CDS             5291..5560
                     /gene="rpsQ"
                     /locus_tag="QEL58_000800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004154489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S17"
                     /protein_id="HDS1675313.1"
                     /translation="MSDNTEKKTLRTVEGRVVSNKMDKTVTVLVERQVKHALYGKYIK
                     RSTKLHAHDADNACKEGDVVRVTEIAPMSKTKNWRVVEVITRAAE"
     gene            5573..5941
                     /gene="rplN"
                     /locus_tag="QEL58_000801"
     CDS             5573..5941
                     /gene="rplN"
                     /locus_tag="QEL58_000801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012728338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L14"
                     /protein_id="HDS1675314.1"
                     /translation="MIQMQSYLDVADNSGAKQVMCFKVLGGSKRRYAGIGDIIKVTVK
                     DAIPRGKVKKGEVYDAVVVRTRKGVRRADGSLIRFDGNAAVLLNSKQEPIGTRIFGPV
                     TRELRSEKFMKIVSLAPEVL"
     gene            5958..6275
                     /gene="rplX"
                     /locus_tag="QEL58_000802"
     CDS             5958..6275
                     /gene="rplX"
                     /locus_tag="QEL58_000802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011260025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L24"
                     /protein_id="HDS1675315.1"
                     /translation="MANRIKKGDQVVVNAGKDKGKQGEVVRVDGDRVVVANVNIVKRH
                     TKPNPQAGVAGGVVEREASIHISNVNVLNPASGKGERVGFKVLEDGRKLRVFRSSGEA
                     LDA"
     gene            6287..6829
                     /gene="rplE"
                     /locus_tag="QEL58_000803"
     CDS             6287..6829
                     /gene="rplE"
                     /locus_tag="QEL58_000803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003486694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L5"
                     /protein_id="HDS1675316.1"
                     /translation="MSSRLEKFYKDEVVPALMKQFGYTNPMEVPKLVKVTLNMGVGEA
                     ATNKKILENAVGDMTKISGQKPVVTKSRVSVASFKIRDGWPIGCKTTLRRHKMYEFLD
                     RLINISLPRVRDFRGVSGRSFDGRGNFNMGVKEQIIFPEIDFDAVDAIRGMDIAITTT
                     AKTDAEAKALLAAFKFPFRN"
     gene            6848..7153
                     /gene="rpsN"
                     /locus_tag="QEL58_000804"
     CDS             6848..7153
                     /gene="rpsN"
                     /locus_tag="QEL58_000804"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005408209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S14"
                     /protein_id="HDS1675317.1"
                     /translation="MAKTSMVNRDIKREKLAKKYAEKRAALKKIVSSVDATYEEKIDA
                     ATKLAKLPRDSSPSRQRNRCELSGRPRGVYSKFGLGRNKLREATMRGDVPGLRKASW"
     gene            7412..7810
                     /gene="rpsH"
                     /locus_tag="QEL58_000805"
     CDS             7412..7810
                     /gene="rpsH"
                     /locus_tag="QEL58_000805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005932726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S8"
                     /protein_id="HDS1675318.1"
                     /translation="MSMTDPIADLLVRIKNAAAVGKQTVKAPSSKIKVAIAQVLKDEG
                     YITDLRVTQLENNKSELEIVLKYFEGKPVIATLKRFSRSGLRQYRGKSELPKVMNGLG
                     ISIISTSKGIMTDAQARQLGVGGEVLCFVA"
     gene            7829..8353
                     /gene="rplF"
                     /locus_tag="QEL58_000806"
     CDS             7829..8353
                     /gene="rplF"
                     /locus_tag="QEL58_000806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006450642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L6"
                     /protein_id="HDS1675319.1"
                     /translation="MSRVAKKPVTLGKVELNVQAESVTVKGPKGTLSLPKPAGIAINV
                     DSGVATLSTENADLVALTGTVRAILANMVKGVSEGFERKLELVGVGYRAAMQGKDLSL
                     SLGFSHPVVFVAPEGITITTPTQTEILVQGADKQVVGEVAAKIRAFRKPEPYKGKGVK
                     YSDEVIIRKEAKKA"
     gene            8434..8793
                     /gene="rplR"
                     /locus_tag="QEL58_000807"
     CDS             8434..8793
                     /gene="rplR"
                     /locus_tag="QEL58_000807"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002811659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L18"
                     /protein_id="HDS1675320.1"
                     /translation="MKMNKNIARLRRAKSTRAHIRELGVARLSVLRTGQHLYAQVFTA
                     DGSKVLAAANTTQTDVMEGLKNGKNADAAAKVGRIVAERAKAAGVEKVAFDRSGYRYH
                     GRIKALAEAAREAGLQF"
     gene            8955..9497
                     /gene="rpsE"
                     /locus_tag="QEL58_000808"
     CDS             8955..9497
                     /gene="rpsE"
                     /locus_tag="QEL58_000808"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004145411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S5"
                     /protein_id="HDS1675321.1"
                     /translation="MAEERQQRGRDRDRNREEKVDDGMIEKLVAVNRVSKTVKGGRQF
                     TFTALTVVGDGEGKVGFGYGKAREVPVAIQKSMEQARKNLVSVDLNNGTLWHTIKDGH
                     GAARVFMQPASEGTGVIAGGAMRAVLEAVGVKNVLAKATGSRNPINLVRATVKGLTAA
                     QSPARIAAKRGKKVEELNHG"
     gene            9490..9681
                     /gene="rpmD"
                     /locus_tag="QEL58_000809"
     CDS             9490..9681
                     /gene="rpmD"
                     /locus_tag="QEL58_000809"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003486678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L30"
                     /protein_id="HDS1675322.1"
                     /translation="MANESNKTVKVRLVRGLRGTQSRHRLSVRALGLNKLNDVRELKD
                     SPQVRGLINTVHYLVKVEE"
     gene            9688..10131
                     /gene="rplO"
                     /locus_tag="QEL58_000810"
     CDS             9688..10131
                     /gene="rplO"
                     /locus_tag="QEL58_000810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003486676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L15"
                     /protein_id="HDS1675323.1"
                     /translation="MTLRLNELSPAPGARTERTRVGRGIGSGLGKTAGRGHKGSFARK
                     GGGKIKAGFEGGQTPMQRRLPKIGFRSPIAKDTAEVLLYALDKLPAGEIDFAALRAAK
                     LVPSTAKKAKVVVKGEVTKAFTLKGIAATAGAKAAIEAAGGSVTE"
     gene            10139..11506
                     /gene="secY"
                     /locus_tag="QEL58_000811"
     CDS             10139..11506
                     /gene="secY"
                     /locus_tag="QEL58_000811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003486674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecY"
                     /protein_id="HDS1675324.1"
                     /translation="MAQAGIGNLAGGMGKFTELRQRLLFVVGALIVYRIGCYVPVPGV
                     NPDAMLAMMQQQGGGIVDMFNMFSGGALHRFSIFALNVMPYISASIVMQLAVHIFPAL
                     KAMQKEGESGRRKITQYSRIGAVLLAVVQGGSIALALQGQVSPSGAPVVYAPGMGFVL
                     TAVVALTAGTMFLMWVGEQVTERGIGNGVSLIIFAGIVAGLPGAVIHTFDAYRDGNIQ
                     FIQLLLIAIVVLAFTFFVVFVERGQRRITVNYARRQGGRNAYMNQTSFLPLKLNMAGV
                     IPAIFASSLLAFPATLAMWSGQAANQSSFGQILQKVANALGPGEPLHMIVFAALITGF
                     AFFYTALVFNSQETADNLKKSGALIPGIRPGKATADYIDGVLTRLTAAGSAYLVIVCL
                     LPELMRTQLNASFYFGGTSLLIVVVVVMDFIAQVQAHLMSHQYESLLKKANLKGGNRG
                     GFARG"
     gene            11854..12210
                     /gene="rpsM"
                     /locus_tag="QEL58_000812"
     CDS             11854..12210
                     /gene="rpsM"
                     /locus_tag="QEL58_000812"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004154500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S13"
                     /protein_id="HDS1675325.1"
                     /translation="MARIAGVNLPAQKHVWVGLQSIYGIGRTRSKKVCEVAGVASTTK
                     IRDLSEPEIERLRAEVGKYIVEGDLRREIGIAIKRLMDLGCYRGLRHRRGLPLRGQRT
                     RTNARTRKGPRKAIKK"
     gene            12222..12611
                     /gene="rpsK"
                     /locus_tag="QEL58_000813"
     CDS             12222..12611
                     /gene="rpsK"
                     /locus_tag="QEL58_000813"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004641037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S11"
                     /protein_id="HDS1675326.1"
                     /translation="MAKPAAKTKKKIKRVVTDGVAHVHASFNNTIVTITDRQGNALSW
                     ATSGGAGFRGSRKSTPFAAQVAAEKAGRAALDYGVKSLEVRIKGPGPGRESAVRSLNN
                     VGYKITNIIDVTPIPHNGCRPPKKRRV"
     gene            12627..13256
                     /gene="rpsD"
                     /locus_tag="QEL58_000814"
     CDS             12627..13256
                     /gene="rpsD"
                     /locus_tag="QEL58_000814"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004145446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S4"
                     /protein_id="HDS1675327.1"
                     /translation="MARYIGPTCKLARREGADLSLKSPARALDSKCKLEQKPGQHGAT
                     ARKGKLSDYATQLREKQKVKRIYGLLERQFRNYYKKASTKKGNTGENLLQLLETRLDN
                     VVYRMGFAVTRPAARQLVSHRGVTVNGKSVNLASYQVKAGDAIALSEKAAKQLRVQEA
                     LTVAAQHDLSPSWVEVDSGKFTGIFKAVPDRSDLPADINEALIVELYSK"
     gene            13313..14311
                     /gene="rpoA"
                     /locus_tag="QEL58_000815"
     CDS             13313..14311
                     /gene="rpoA"
                     /locus_tag="QEL58_000815"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020852431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit alpha"
                     /protein_id="HDS1675328.1"
                     /translation="MTVTANQVLRPRGPQIERLTDTRAKVVIEPLERGYGHTLGNALR
                     RVLLSSIPGFAITEVEIDGVLHEYTTVEGLQEDVLEVLLNLKDVAIRMHSGDSATLSL
                     SKQGPGVVTAADIKVDHNVEILNGDHVICHLTKDTAVNMRLKIERGFGYQPAAARRRP
                     DEETRAIGRLVLDASFSPVRRVAYAVEAARVEQRTDLDKLVIDIETNGTIDAEEAVRT
                     AADILSDQLSVFGDFTHRDRGAAKPANNGVDPVLLRPIDDLELTVRSANCLKAESIYY
                     IGDLIQKTEVELLKTPNLGKKSLTEIKEVLAQRGLSLGMKLENWPPAGVASHGMLG"
     gene            14503..14886
                     /gene="rplQ"
                     /locus_tag="QEL58_000816"
     CDS             14503..14886
                     /gene="rplQ"
                     /locus_tag="QEL58_000816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010340456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L17"
                     /protein_id="HDS1675329.1"
                     /translation="MRHQKSGRKFSRTSAHREAMFKNMAASLFKHELIKTTLPKAKEL
                     RRVAEPLITLAKVDSVANRRLAFARLRDNEAVGNLFTILGPRYANRPGGYLRLLKCGF
                     RAGDNAPMAYVELVDRPVVAEEVAE"
     gene            15061..15567
                     /locus_tag="QEL58_000817"
     CDS             15061..15567
                     /locus_tag="QEL58_000817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010483974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="disulfide bond formation protein B"
                     /protein_id="HDS1675330.1"
                     /translation="MNPLRWPFRAQFFLGFLICAGLLGYAIFLQLKMGLEPCPLCIFQ
                     RLAFAALGLLFLIGALHGPSNRPGRATYGVLAFIAAAVGVGIAARHVYVQMLPPEMGA
                     TCGPPLSFLRETMGPLEVFRTVLTGTGNCGNIDWTFLGLTMPMWSGVWFVLLALWALL
                     VSLRKVKR"
     gene            complement(15613..17739)
                     /locus_tag="QEL58_000818"
     CDS             complement(15613..17739)
                     /locus_tag="QEL58_000818"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014089489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDS1675331.1"
                     /translation="MKPSLLATGITLALALASLPAFAAAADDTSAPVKDLDAVTVHAQ
                     LDQARNMLSPDIGSSQYQITAEDIQKQPLGASAPLSQVLLQAPGVVQDSYGGVHVRGD
                     HANLQYRINGVLLPESISGFGQTLDARTIKSIRLMDGALPAQFGERTAAVVDITTRNG
                     AERGNGGSAGLTAGSFGKLNPNASWWGNQGRWSWFLTGNYDQNEVGLENPTPSRKPLH
                     DDTHQGKAFADLTYLVNDNTRLSVFAGFANNRFQIPVNPGQTPQFGYLDTTTFDSSQL
                     DETQRETTRFGMLVLQGTLGSTAYQLSAGQRYSDVGFNPDVVSDLVFSGVASQVQRSN
                     RANTLQADFSTPLGNDHTLRYGLYGNYENARASNNSWVFPVDDAGQQSSTTPLLIPDR
                     SAFHASTLALYVQDEWKIGDDWTVNYGLRGDRYKAFGRTEGQLSPRVGVVWNASDSTT
                     VHAGYSRYFTPPASELIASSDIALYDGTTNQQPSGGNNIPLAERSDYYDIGVSQQLGE
                     HLTLGLDAYDRRVARLQDEGQFGAAYIYSTFNYRRGHIRGLEFSADYSNGPFSAYLNA
                     ALNKAIGTDVITGQYNLDPEALAYVANHWIHLDHDQKLTSSGGFSYAFAGHNRIGANY
                     VFGSGLRSDIEGVPNGGELPSYLQVNLSAGHDFNADSGHPLHVQLALINALDRSYQLR
                     DGGGVGVFAPQWGPRRGAYLSLQQDF"
     gene            17960..19351
                     /locus_tag="QEL58_000819"
     CDS             17960..19351
                     /locus_tag="QEL58_000819"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012479239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase class II"
                     /protein_id="HDS1675332.1"
                     /translation="MSLSAVSPVPDPAATVAGAAWSPESWRGKTALQMPTYPDPVALD
                     AALHELKRLPPLVTSWEILALKQQLAEAQEGKRFLLQGGDCAENFSDCESGTISNRLK
                     VLLQMSLVLVHGLRQPVIRVGRFAGQYAKPRSADTETRDGVTLPSYRGDVINAPAFTE
                     AARLPDPKRMLQAHAHSAMTMNFVRALIDGGFADLHHPEYWNLEWVSHSPLAAEYQKM
                     VASIGDAVHFMETLAGARVHNLNRIDFYTSHEALLLPYEQALTRQVPRQQGWLNLSTH
                     YPWIGMRTAALDGAHVEYLRGVRNPIAIKVGPSVTPDQLLRLIDVLNPHDEPGRLSFI
                     HRMGAAQIAEKLPPLLDAVKRDGRRVLWVCDAMHGNTESTANGFKTRRFDNVRGEVEM
                     SFDLHAAAGTRLGGVHLELTGEDVTECTGGARELTERDLERAYRSTVDPRLNYEQSLE
                     IAMAIVRKQEQVR"
     gene            complement(19641..20354)
                     /locus_tag="QEL58_000820"
     CDS             complement(19641..20354)
                     /locus_tag="QEL58_000820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010486889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDS1675333.1"
                     /translation="MSPTLIDASVPAARVLVIDDETQIRRFLDISLRAQGYQVRQAAT
                     GQEGLQLAASEDMDLVILDIGLPDMEGHEVLEQLRQWSQVPVIMLTVRAGEAEKVRAL
                     DTGANDYVTKPFGTQELMARVRALLRTRSVPSDGTPPVFDDGHLHVDLVRREVALDGE
                     PVALTRKEYALLSLLLRNAGRVVTQPQILQEIWGPTHQHDTHYLRILVGKLRHKLGDS
                     ALDSRYLFTEPGVGLRFKG"
     gene            complement(20335..22995)
                     /locus_tag="QEL58_000821"
     CDS             complement(20335..22995)
                     /locus_tag="QEL58_000821"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014645670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase KdpD"
                     /protein_id="HDS1675334.1"
                     /translation="MTDARTRQADALVEGLQREAGGKLTVFLGAAPGVGKTYTMLTRA
                     QEQLRRGVDLVVGLVETHGRADTQALLEGLPQLPLKEVAYHGHTLQEMDLDAVLARHP
                     ALVLVDELAHRNAPGSRHERRWQDVMELLDAGIDVWTTVNIQHLESLNDVVMRITGVR
                     VSETVPDGVLDRLHDIVLVDLPPRELIARLQQGKVYVPEQATQALQAFFSPANLTALR
                     ELAMQEAADRVDSSLRETRAARGEGNLPLRRGVLVAIDGGGQSEYLVRVARRIAERRD
                     APWTVVTVQGRRQDDATRREIDAAFALARRLGGDAELLHGSSIADALLDHAAHNGVST
                     LVLGRTRERPLARMFNRTLTQQLIQRGAHYEITIISTPQARARSRREGLMAPVRGFSH
                     EPVQALIATALACVVAWLAERWVGMADLSMVFIVAVVLVAARTRASVAVMAAILCFLA
                     YNFLFIAPRFTFAIGARQGVITVFLFLAAALVAGRLASRLRMQVIALRAANRHARARQ
                     QLGRQLASAAGNGEVAQAGRHALEQAMDVPAWLRIGTDTAAGGRSQPGDTDLAAADWA
                     LRHGQPSGRFTDTLAGAQWWFLPLLDGEDHAIGVAGLYLPGAQARLLPEQRQLAEAMV
                     DDIAQAALRTRLVAELEQAHVSNETERLRSALLSSVSHDLRSPLAAMIGSADSLASYG
                     AAMDTADRRALLDTILVEGERLDRYIQNLLDMTRLGHEGLKINRDWIGVDELIGSAAR
                     RLQRYQPKVRLELDIPSTLAPIWVHPALVEQAVFNVMENAAKFSPPDAAVQVQARELD
                     GQLRIDVIDAGPGIPDDERARIFDMFYSVERGDRGRHGTGLGLTICQGMIGAHGGSVQ
                     ALPGRDGRGTLIRITLPLLKPASHDEPDPD"
     gene            complement(23047..23697)
                     /gene="kdpC"
                     /locus_tag="QEL58_000822"
     CDS             complement(23047..23697)
                     /gene="kdpC"
                     /locus_tag="QEL58_000822"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012509818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit KdpC"
                     /protein_id="HDS1675335.1"
                     /translation="MNRSASTSSSLSREAKAEARVAGLQDGASWRPAIGLGLATLLLA
                     GAVYAGIATGFAGLAYPTQAEGSLLRDGSGQVRGSAWLSQPFTGDGYFQARPSAANYD
                     PMAAAGSNMARSNPALAERVAASTAAVAAREGVAPAQVPADLVTQSAGGLDPQLSPEA
                     AQLQVARVARARGLPVERVQALVQAHTEGRQWGLFGQPRVNVVTLNFALDHAAKAP"
     gene            complement(23694..25751)
                     /gene="kdpB"
                     /locus_tag="QEL58_000823"
     CDS             complement(23694..25751)
                     /gene="kdpB"
                     /locus_tag="QEL58_000823"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014035704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit KdpB"
                     /protein_id="HDS1675336.1"
                     /translation="MSSHASSTRSTHAPRPALLDGAGLRRALVEAVRKLSPMHLVRSP
                     VMAVVMAGTIVAAIVTLTGNAPLGFGLAVTAILLVTVLFGNFAEAVAEARGRGQAASL
                     RRARQDLVARRLVAPQPGAAEAQVPAAELRPGDHVIVSAGELVPADGEIVQGLATINE
                     AAVTGESAPVLREAGTDRSGVIGGTKVLSDQIIVRVTAEPGHSFLDRMIALVEGANRQ
                     KTPNEVALTLLLAAMTLTFLVVVATLPAIGAAVGVKVDPLLLIALLVCLIPTTIGGLL
                     PAIGIAGMNRALAANVLAKSGKAVEVAGDVDVLLLDKTGTITYGDRQASHFHPLAGID
                     ASQLREAALLSSLADPTPEGKSIVRLAREQGCATAEPDHADYLAFSAQTRMSGVDLEH
                     GRQIRKGALDAIRNHVQALGGTVPAELAGRVEQVARNGATPLVVAEGRHVLGVIELSD
                     VVKHGMREKFAQLRAMGIRTVMITGDNPLTAAAIAAEAGVDDYIAEARPEDKLARIRQ
                     EQAGGRLVAMVGDGTNDAPALAQADIGLAMNSGTQAAKEAGNMVDLDSDPAKLLAVVE
                     VGKQQLITRGALTTFSLANDVSKYFAILPALFAAAVPTMAALNVMQLSSPRNAVLAAL
                     IFNALVIPALIPLALRGVRFRPATATALLRRNMLVYGLGGVLLPFAAIKLIDLLLVLV
                     FGA"
     gene            complement(25762..27471)
                     /gene="kdpA"
                     /locus_tag="QEL58_000824"
     CDS             complement(25762..27471)
                     /gene="kdpA"
                     /locus_tag="QEL58_000824"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005412005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit KdpA"
                     /protein_id="HDS1675337.1"
                     /translation="MTEMLVIIAASLLLAWPLGLYLARVMRGAPMKVDVLFHWIEKPL
                     YKVFGVDPSRSMSWRGYALAFVLSNVVVAVLTQAVFMTQAWLPLNPDQIPNMRWDTAL
                     HTMISFLTNTNQQHYSGQAQLSYLSQMTGITGLQVVTPMMGLALAVATLRALFARAPQ
                     AAAATGTGDDRQVAVGNYYVDVVRLCVRFLLPLCLVWTLLLTSQGVPSTLAGGPQATP
                     IDASAGMAGQKLPLGPVAAMVAAKQLGANGGGWYGPNSSFPLENPTPLSNALEVVGIL
                     LIPMAVIFMIGAFTGRRRFGALVFSCMLGMSLLSTGAMMWSEGHSASAATPLLMEGKE
                     VRFGADGTALWAAVTTQVSNGSVNGMHDSLAPLSGGIAMVNMLVSAIWGGIGCGLQQF
                     IVYLLLGVFLAGLMTGRTPELFGRKLETPQVRLLALLVLLQPITLLVFTAITLAVPGL
                     AGTSNPGFHGISQVFYEYVSAYANNGSGFEGLGDATLWWNLSCSLVLLLGRFPLLIIP
                     LVVAAQLAAKRQAPESAGSLQIETPTFALTLVSVIVILTVLQFMPALVLGPIADHLSL
                     GLH"
     gene            complement(27483..27575)
                     /locus_tag="QEL58_000825"
     CDS             complement(27483..27575)
                     /locus_tag="QEL58_000825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006452907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit F"
                     /protein_id="HDS1675338.1"
                     /translation="MSPWLSLLCGVLVLVAAAYLLYVVLRPESF"
     gene            complement(27750..28415)
                     /locus_tag="QEL58_000826"
     CDS             complement(27750..28415)
                     /locus_tag="QEL58_000826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675339.1"
                     /translation="MSRVPAVLFAGLLLAVPFSVPAQPRGGGKVEKKLYCWNEGKERI
                     CSDSLPADAVNHARDEFNAKSGLRNAQVQRALTDEERAAASTEAAQRQLDLMAAQTRQ
                     RTEQAMLTTYGSEDDLRRVFAERQEVLDNNLKTAEYNVTSLRESLVALLAAAGDRELA
                     GGKVAGKQAEAIRQRHVQLQAQQRLQAGFVQQQQALKAEIDSSLQRYRELKGLAPAAT
                     PAG"
     gene            complement(28435..29094)
                     /gene="pyrE"
                     /locus_tag="QEL58_000827"
     CDS             complement(28435..29094)
                     /gene="pyrE"
                     /locus_tag="QEL58_000827"
                     /EC_number="2.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010486876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orotate phosphoribosyltransferase"
                     /protein_id="HDS1675340.1"
                     /translation="MSDHRHRFLQLALTADALRFGQFTLKSGRLSPYFFNAGRFDSGS
                     LLSQLGACYADAIDATGIKYDVVFGPAYKGIPLATAMACELAQRGRDLPLSFNRKEAK
                     DHGEGGQLIGADMNGKRVLIVDDVITAGTAIREALGIIRAAGGTPAGIVVALDRQEIA
                     SESDRRSAAQSVAEEAGIPVIAVASLADLLDFASGNPELVGYRQPLEAYRAQYGVRST
                     R"
     gene            29257..30057
                     /gene="xth"
                     /locus_tag="QEL58_000828"
     CDS             29257..30057
                     /gene="xth"
                     /locus_tag="QEL58_000828"
                     /EC_number="3.1.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006388246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HDS1675341.1"
                     /translation="MRIISFNANGIRSAATKGFLDWFRAQDADVLCIQETKAQEDQLT
                     DPMFRPDGHHCFYRDAITKKGYSGVAIYSKREPDQVITSLGWAPFDDEGRYIEARYGN
                     LSVVSFYIPSGSSGDLRQGFKFEVMEWLRPILEEWARSGRDYVLCGDWNIVRSALDIK
                     NWKSNQKNSGCLPEERDWLNALCADHGQATDVAAGRGWADAYRLLNPTGEDYTWWSNR
                     GAARANNVGWRIDYQFITPGLRDRLRSCSIYRDERFSDHAPFIVDYDL"
     gene            30054..31358
                     /locus_tag="QEL58_000829"
     CDS             30054..31358
                     /locus_tag="QEL58_000829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005420467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDS1675342.1"
                     /translation="MTEAATPVSYKGWAGIKRAFGTPSALTMAMLGFGSGLPFLLIAS
                     QTLSTRLRDVGLDLGSIGLISLASFFYLLKFLWAPLLDRYAFPLLGGLGRRRSWLLVS
                     QALVLVGLVALAFVRPEQGVWPLVAWVLVASFAGATQDSAVDAYRIEIAPQAAQAALA
                     ATYTLGYRIGLILAGAGALYLAQFEGWIVAYLAMAALMLLPIVTTLLCAEPERPATTV
                     QRRIDVAEAFVQPITSFFSRNGVALALVLLAFVGLFKFPDQVIGVMAGPFYLDSGFDK
                     ADIATVSKLFGVWMGIGGAFLGGIAVAAFGFRRMLLVAALGVALSNLAFLLMAHNPGK
                     LWAFYAALSADNLFQGFAGTVLVAFMSSLTDRNFTATQYALLVSLANLPGKFVGGVSG
                     YIVEATSYSTFFILSSVTVVPTLLLLAWLWPRIVDRGPPPVA"
     gene            31436..31666
                     /locus_tag="QEL58_000830"
     CDS             31436..31666
                     /locus_tag="QEL58_000830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005420465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675343.1"
                     /translation="MADVVLRDLDPLLLDRIRRVAVARGWTHEQTCAALLEQGLFSSE
                     LEVRSGFGDPEVDALSDAIAALQALPAGQGFD"
     gene            complement(31705..32832)
                     /locus_tag="QEL58_000831"
     CDS             complement(31705..32832)
                     /locus_tag="QEL58_000831"
                     /EC_number="2.7.1.170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anhydro-N-acetylmuramic acid kinase"
                     /protein_id="HDS1675344.1"
                     /translation="MNTTADADAPLYLGLMSGTSADGIDAALVQFPTTGGCRFVHGLT
                     TRWEPVLRARLVALGEGGPLDSLEELGELDARIAISFADAANQLLAEAGVDPAQVRAI
                     GSHGQTVRHRPLADPAFTVQLGDGNRIAELTGITTVCDFRRRDVAAGGHGAPLMPAFH
                     LGMLGTADEDRAVLNLGGIANLTLIPREGAVRGFDTGPANALMDAWCQRHTGRTFDAD
                     GAYAASGAVDDSLLAGWRSDPWFALPPPKSTGREQFHLAWAEAHMGEGEYAAADVQAT
                     LLELTVATVADALLAQQPQTRRLLVCGGGVRNRQLMKRLAARLPEVQVESSAMHGLDP
                     EYVEAMGFAWLAQRTMDGLAGNLPSVTGAQGPRILGAIHLA"
     gene            complement(32898..34370)
                     /locus_tag="QEL58_000832"
     CDS             complement(32898..34370)
                     /locus_tag="QEL58_000832"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006388279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HDS1675345.1"
                     /translation="MHNSEQGRARKQRFQERLHVLHDNALHRKLRQHLPAAFNERWTR
                     RHWMHASLFATIGALVATIVPGFSHTIDAPFADTHTSLALPLPPLSMARQQQVPGDSW
                     QVLRVQRGQTLSDLFDQAGIPASTLHRVLDHPGARESLTKLRPGTEIAFDMPLSGDLR
                     SIRFDRDGDNRVELSLAGDDIKEKVTKRETSTRTVVTSGEITSSLYAAARRAGLSPSA
                     IATMTDDIFKYDIDFSKDLQPGDRFSVVMDETWREGEKVDTSKILAATFTTGGKTYSG
                     FRFDRNGKSEYYDINGRSLKKSFIRMPIPFARLSSTFGARKHPVLGKMRMHKGVDYAA
                     RTGTPIMAAGDARVQFAGVQRGYGNVVILDHGRGHTTLYGHMSRFANIKTGQRVAQGT
                     VIGYVGSTGLATGPHLHYEFRVNGEHRNPLTVTMPPPEPLKGAELVAFRAQTAPAMAR
                     IQGMEKLIYADASPAPTSRDEAAPEVASAKDKSSAGRKRG"
     gene            34537..35748
                     /locus_tag="QEL58_000833"
     CDS             34537..35748
                     /locus_tag="QEL58_000833"
                     /EC_number="6.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006388280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine--tRNA ligase"
                     /protein_id="HDS1675346.1"
                     /translation="MSSIEEALALIGRGADEILKLEDLRARLQEGRPLRIKAGFDPTA
                     PDLHLGHTVLLNKMRQFQDLGHQVIFLIGDFTGMIGDPSGKSLTRKPLSREDVLANAR
                     TYEEQVFKVLDRSRTEVRFNSEWFGKMGAADMIRLAGQHTVARMLERDDFAKRYAAQQ
                     SIAIHEFLYPLVQGYDSVALEADVELGGTDQKFNLLMGRGLQEHHGQKPQVVLTMPLL
                     EGLDGVNKMSKSLGNYIGISEPAIDIVTKTMKVDDTLMWRWIELLSFDISQAEAVQLR
                     EQVASGGLNPRVVKLRLARELATRFHDAAAAEQAIAGWEAAVTGQGDITQLPLQDVVI
                     PAEGLRIAALLTAAGLTPSNSEANRKLKERAVKVDGDVVEDGQQVLLPGFEGLLQVGK
                     RTFARVRLVTA"
BASE COUNT         6343 a        11859 c        11928 g         6109 t
ORIGIN      
        1 gaaggcggcc gccacacccc gttcttcaac ggctaccgtc cgcagttcta cttccgtacc
       61 accgacatca ccggcgcagc tgcactgccg gaaggcgtcg aaatggtgat gccgggtgac
      121 aacgtcaaga tggtcgtcac cctgatcaac ccggtggcaa tggacgaagg cctgcgcttc
      181 gccatccgcg aaggcggccg taccgtcggc gccggcgtgg tctcgaagat catcgagtaa
      241 tctggtagta tctgcgcccc gatgttgcct gggtagggca tcggggcgta tcaaatggga
      301 aagcaggcac aggatgtgcc ttgtgttccc cggaccagga agggtcaatg ccattcaggc
      361 ggcgtcaaca ggcgactgtt gacagctgcc ttgcgtgcca ttatgcttct acgtctgggc
      421 aggccgggaa actggtctgc ctacgttttt gaggtctatg gagtgacctt ggcggcctgc
      481 aggagtgcgg gccgtccgta ttcaggaatt tcatggggca aagcaaccca gaggctttgt
      541 ctgtcgctct tttaacgaag gaacctaccg ccatggcgga ccaaaagatc cggatccggc
      601 tgaaagcgtt cgatcatcgt ctgatcgacc gttcggccag cgagatcgtt gaaacggcaa
      661 agcggaccgg cgcgcaagtg cgtggcccga tcccgctgcc gaccaagatc gagcgttaca
      721 ccgttctcgt ctccccgcac gtcgacaagg acgcgcgtga ccagtacgag acccgcacgc
      781 acaagcgcgt gctcgatatc gttgacccga atgacaagac cgtggacgcg ctgatgaagc
      841 tcgaactggc tgccggcgtc gacgttcaga tcaagctgac ctgaggacta cgaccatgac
      901 gaagaagtat tcgttgggct tcgtgggccg caaggctggc atgagccgcg tgttcactga
      961 agatggccgc tccatcccgg tgaccctgat cgaagcaacc ccgaaccgca tcgcgcagat
     1021 caagactgtc gaaaccgacg gctacagcgc cgtgcaggtg accgtcggcg cgcgtcgcgc
     1081 tgccctggtc aacaagccgg aagccggcca cttcgccaag gcgaaggtgg aagcgggtcg
     1141 tggcctgtgg gaattccgcg ttgaagacgc gcagctcggc gatttcgccg ttggcggcga
     1201 agtcaaggcg gacatcttcg aagtcggcca gatcgtcgac gtccagggtg tcaccaaggg
     1261 taagggcttc cagggcacca tcaagcgcca caacttccgt atgggcgatg caacccacgg
     1321 taactcgctg tcgcatcgcg cgccgggttc gctgggtcag cgccagaccc cgggtcgtgt
     1381 tttcccgggc aagaagatgt cgggccacat gggcgcggtg cagcagagca cccagaacct
     1441 ggaagtggtc aaggtcgacg tcgagcgcgg tctgatcgcg gttcgcggcg ccgttccggg
     1501 cgcggcgggt ggcgacgtga tcgtccgtcc ggcgagcaag gcataaggag agatgacgat
     1561 ggaactcgtt atcacgggta gcaacaacaa ggtctcggtc tccgacgccg tgttcggtcg
     1621 cgatttcagc gaagatctgg tccaccaggt cgtcgttgcc taccgcaacg ccggccgcgc
     1681 cggcaccaag gcacagaaga ctcgctctga agtggctggt accaccaaga agtcgaagaa
     1741 gcagaagggc ggcggcgcgc gtcatggcgc actgacggct ccgatcttcg tcggcggcgg
     1801 tgtcaccttc gcggccaagc cgcgcagctt cgagcagaag gtcaatcgta agcagtaccg
     1861 tgccgccatg tgcgcgatcc tgtccgagct gaaccgtcag ggccgtctga ccatcgtgga
     1921 gtccttcgat gtcgaagtga ccaacacgaa gggtctgatc gccaagctgg ccggcctgga
     1981 agtgggcaag cgcccgctga tcgtcactga agaagcctcc gagcacctgt acctgtccgc
     2041 ccgcaatctg ccgtacgtgc aggtgcgtga cgtgcagggt ctggacccgg tgtcgctggt
     2101 cggtgccgac acggtcgtca tcaccgctga cgcggtcaag aaggtcgagg agtggctggc
     2161 atgaacagca acgaaaaaat cttcagcgtg ctgcgtgccc cgcgtgtctc cgaaaagacc
     2221 gcgcgcctgc aggaactctc caaccagtat gtcttcgaag tttcgaacga agccaccaag
     2281 gccgatgtaa aggccgcggt tgagcagctg ttcgacgtca aggtcgaagc cgtcaacgtg
     2341 gtcaacgtca agggcaagaa caagtccttc cgtaaccgtg ctggccgccg cggcgattgg
     2401 cgcaaggcgt acgttcgcct ggccgatggc cagtcgatcg atgtaacggc caaggcctga
     2461 ggtacatccc atgccattga tgaaattcaa gcccacctcc cccggccgcc gttcggccgt
     2521 gcgcgtggtc acccccgacc tgcacaaggg tgctccgcac gccgcactgg tcgagtcgca
     2581 gagccgctcg ggtggtcgta accaccatgg ccgcatcacc gtgcgtcacg tcggtggtgg
     2641 tgccaagcag cactaccgca tcatcgactt caagcgcaac aagctgggca tcccggcgcg
     2701 cgtggaacgc atcgaatacg atccgaaccg caccgcccac atcgccctgc tgtgctacgt
     2761 cgacggtgag cgtcgctaca tcatcgcccc gaagggcctg aaggcgggtg atcaggtgat
     2821 cgccggttcg gatgccccga tcaagtcggg caacaccctg ccgctgcgca acatcccggt
     2881 cggtaccacc atccactgca tcgaactgaa gccgggcaag ggcgctcaga tcgctcgcgc
     2941 cgccggtgcg gccgtgcagc tggtggctcg cgaaggcatc tacgccaccc tgcgcctgcg
     3001 ctcgggtgaa atgcgcaagg ttccggtcga gtgctgcgcc accatcggtg aagtcggcaa
     3061 cgacgagcac agcctggaaa agctgggcaa ggccggtgcc aagcgttggc gcggcgtccg
     3121 cccgaccgtt cgtggtgctg ccatgaaccc ggttgaccat ccgcacggtg gtggtgaggc
     3181 caaggccggc cagggtaacc cgcatccggt caccccgtgg ggtgtcccga ccaagggtta
     3241 caagacgcgc cataacaagc gcactcagca gttcatcgtc cgcgatcgta ggggctaatc
     3301 gaccatggca cgttcactca agaagggccc gttcgtcgat caccacctcg tcaagaaggt
     3361 ggaggccgct gcgggcagca agaagccgat caagacctgg tcgcgccgtt cgatgatcct
     3421 gcctgacatg gtaggcgtca ccattgccgt gcataacggc aagaaccaca tcccggttct
     3481 cgtcaacgag aacatggtcg gccacaagct cggcgaattt gccatcaccc ggaccttcaa
     3541 gggtcacggt ggtgacaaga agtcgggcaa gtaaggagag atgacaatgg aagcgaaagc
     3601 catcctgcgc actgcgcgca tctccccgca gaaggctcgt ctggtcgctg accaggtgcg
     3661 cggtctgccg gccgagcgtg cggtcaacct gctgaagttc tcggacaaga aggctgccca
     3721 cctgatcaag aaggtggtgg agtcggcaat tgccaacgcc gagaacaacc agggcgccga
     3781 cgtcgacgag ctgaaggttc agaccatcat ggttgatgaa ggtccgaccc tgaagcgttt
     3841 catggcgcgg gcgaaaggcc gcggtacccg catcctcaag cgcaccagcc acatcactgt
     3901 ggttgtgggc gccgccaagt aagcggataa ggaaaagacc atgggtcata aagttcatcc
     3961 gattggtatc cgcctcggca tttccaagga ctggaactcc aagtggtacg ccaacaaggc
     4021 cgagttcgct ggttacctgg cagccgacct gaaagtgcgc gaaatgctgc gcaagaagct
     4081 ggctcaggcc ggcatcagca agatcctgat cgagcgtccg gccaagaccg ctcgcgtgac
     4141 gatccacacc gcccgtccgg gcgtggtgat cggcaagcgc ggtgaggaca tcgagaagct
     4201 gcgcaaggaa gtgagcgaga tgatgggcgt cccggcgcac atcaacgtca ccgaagtgcg
     4261 caagccggaa ctggacgcgc agctcgttgc cgagtcgatc gcccagcagc tggagcgtcg
     4321 catcatgttc cgccgcgcga tgaagcgctc ggtcggcaac gcgatgcgcc tgggtgccct
     4381 gggcatcaag gtcaacgtcg gtggccgcct caacggtgca gaaatcgccc gttcggagtg
     4441 gtaccgcgaa ggccgcgtgc cgctgcacac cctgcgtgcc gacatcgact atggcttcgc
     4501 tgaagccaag acgacctacg gcatcatcgg catcaaggtc tggatctaca agggcgaggt
     4561 cttcgatttc tcccaggttg gccaggaaaa gcaggacgac accccgtcgc gcaacgatcg
     4621 tcacgatcgc ggcgaccgtg gtgaccgtca gcgcccggcc cgtgaagcga ggtaacgaca
     4681 atgttgcaac ccaagcgaac caagtaccgc aaggtacaca agggccgtaa cgatggcctg
     4741 agctggagcg ccaacgctgt cagcttcggc gaatacggcc tgaaggcaac cgcacacggt
     4801 cagctgaccg cgcgtcagat cgaagcggcc cgccgctcga tcagccgcta cgtcaagcgc
     4861 ggcggcaaga tgtggatccg cgtgttcccc gacaagccca tcaccaagaa gcccatcgaa
     4921 gtccgaatgg gttctggtaa gggtaacgtg gaatactggg tggcccagat ccagcccggc
     4981 cgcatgatct atgaaatcga gggtgtttcc gaggaagtgg ctcgcgaggc gttccgcctg
     5041 gccgccgcca agctctcggt caccaccact ttcgtgaccc gtacggtgcg ctgatggata
     5101 tcaaaactct ccgtgaaaag tcggctgacg aactcaaggc ccacctgatc gacctgcgta
     5161 aggaacagtt ctctgtccgt atgcagcagg tcaccggcca gctgccgaag acccacgaca
     5221 ttcgccgggt ccgtcgcgag attgctcgcg tcaagaccct gctcggcagc acgaagtaag
     5281 gatggccgct atgagcgaca atactgaaaa gaagacgctg cgcacggtcg aaggccgtgt
     5341 cgtcagcaac aagatggaca agacggttac cgtcctggtt gagcgtcagg tcaagcacgc
     5401 gctgtacggc aagtacatca agcgctcgac caagctgcac gcccacgatg ccgacaacgc
     5461 ctgcaaggaa ggcgatgtcg tccgcgtgac cgagattgct ccgatgtcca agaccaagaa
     5521 ctggcgcgtg gtggaagtca tcacgcgtgc ggctgaataa ggagtctgaa tcatgatcca
     5581 gatgcagagc taccttgacg tcgcggacaa ttcgggtgcc aagcaggtga tgtgcttcaa
     5641 ggtgctgggt ggttccaagc gccgttacgc cggcatcggc gacatcatca aggtcaccgt
     5701 gaaggatgcg attccgcgcg gcaaggtcaa gaagggtgaa gtgtatgacg ccgtcgtggt
     5761 gcgtacccgc aagggtgtgc gtcgcgccga tggctcgctg atccgcttcg acggcaacgc
     5821 tgccgttctg ctgaacagca agcaggagcc gatcggtacc cgtatcttcg ggccggtgac
     5881 ccgtgaactt cgttcggaga agttcatgaa gatcgtctcg ctcgctcccg aagtgctgtg
     5941 agcgacagga gataatcatg gctaaccgta tcaagaaggg cgaccaggtt gtcgtcaacg
     6001 ctggcaagga caagggcaag cagggcgaag tcgtccgcgt cgacggcgac cgtgtggtcg
     6061 tcgccaacgt gaacatcgtc aagcgccaca ccaagccgaa cccgcaggca ggtgttgccg
     6121 gcggcgtggt cgagcgcgaa gcttcgatcc atatctccaa cgtgaatgtt ctgaacccgg
     6181 cttcgggcaa gggcgagcgc gttggcttca aggtgctgga ggatggacgc aaactgcgtg
     6241 tgttccgctc cagcggtgag gcgctcgacg cctgaggaat gagaagatga gttcccgtct
     6301 cgaaaagttc tacaaggacg aagtggtgcc ggcgctgatg aagcagttcg gttacaccaa
     6361 tccgatggaa gtgccgaagc tggtcaaggt caccctgaac atgggtgtcg gcgaagcggc
     6421 caccaacaag aagatcctgg aaaacgccgt cggcgacatg accaagattt ccggccagaa
     6481 gccggttgtc accaagtcgc gtgtgtcggt tgcgtcgttc aagatccgcg atggttggcc
     6541 gatcggctgc aagaccacgc tgcgtcgcca caagatgtac gagttcctgg atcgcctgat
     6601 caacatctcg ctgccgcgcg tgcgcgactt ccgtggtgtt tccggtcgtt ccttcgacgg
     6661 ccgcggcaac ttcaacatgg gtgtgaagga gcagatcatc ttcccggaaa tcgacttcga
     6721 cgccgtcgac gcgatccgcg gtatggatat cgccatcacc accactgcga agaccgacgc
     6781 ggaagcgaag gcgctgctgg cagcgttcaa gttcccgttc cgtaactgat ccgtcgagga
     6841 aaccgaaatg gcaaagacct ccatggtcaa ccgcgacatc aagcgggaaa agctggcaaa
     6901 gaagtacgct gaaaagcgtg cggctctgaa gaagatcgtg tcctccgtgg atgcgaccta
     6961 cgaagagaag atcgacgccg caaccaagct ggccaagctg ccgcgcgatt cgtcgccgag
     7021 ccgccagcgc aaccgttgcg agctgtcggg tcgtccgcgt ggcgtgtaca gcaagttcgg
     7081 cctcggccgc aacaagctgc gcgaagccac catgcgcggc gacgtcccgg gtctgcgcaa
     7141 ggccagctgg taatcccagc cggccctgcg atcaggagcc ccttcggggg ttcctgaacc
     7201 ggggcagggg aggcgttcag ccttccctga gcaaaaaaac cgaagagccc ggcgcaagcc
     7261 gggctctttt ggcgtatact cccgcgtctt gccctgtgca aacggggtag ctgggcaggc
     7321 cgctggcctg ctgcaagagg ggacctggcc cgtttccagg agacaacaga ttttcgcgaa
     7381 agcggatatc ggtgcactca aaggtactca tatgagcatg actgatccca tcgccgacct
     7441 gctggtccgc atcaagaatg cggctgcggt tggcaagcag acggtgaaag ccccgtcgtc
     7501 caagatcaag gttgcgatcg cccaggtcct gaaggacgag ggttacatca ccgacctgcg
     7561 cgtgacccag ctggaaaaca acaagtccga gctggaaatc gtgctgaagt atttcgaagg
     7621 caagccggtc atcgcgaccc tgaagcgctt ctcgcgttcg ggcctgcgcc agtaccgcgg
     7681 caagagcgag ctgccgaagg tcatgaacgg cctgggtatc tccatcattt ccacctccaa
     7741 gggcatcatg actgatgcgc aggcgcgcca gctgggcgtc ggcggcgaag tcctgtgctt
     7801 cgtggcctaa ggcgaaagga gtagaactat gtcccgcgta gccaagaagc ccgtcaccct
     7861 gggtaaggtt gaactgaacg tccaggccga atcggtcacc gtcaagggcc cgaagggcac
     7921 cctgtcgctg ccgaagccgg ccggtattgc catcaacgtc gacagcggcg ttgccaccct
     7981 gagcaccgag aacgccgacc tggtcgcgct gaccggtacc gtccgcgcga tcctggccaa
     8041 catggtcaag ggcgtgtccg aaggcttcga gcgcaagctg gagctggtcg gcgtgggtta
     8101 ccgtgctgcc atgcagggca aggatctgag cctgtcgctc ggtttctcgc acccggtcgt
     8161 gttcgtggcg ccggaaggca tcaccatcac caccccgacc cagaccgaga tcctggtcca
     8221 gggcgctgac aagcaggtcg tcggtgaagt cgccgccaag atccgtgcgt tccgcaagcc
     8281 ggaaccgtac aagggcaagg gcgtgaagta ctccgacgaa gtcatcatcc gtaaggaagc
     8341 caagaaggcg taagcgcgag tccctcgcaa gagcccgcac atccttgtgc ggactcctca
     8401 gggaaaagcc caaccttcag ctttcaagga ataatcaaaa tgaacaagaa catcgcccgc
     8461 ctgcgtcgcg ccaagtcgac ccgcgcccac atccgtgagc tcggcgtcgc ccgcctgtcg
     8521 gtgctgcgca ccggccagca cctgtacgcc caggtcttta ccgccgacgg ttccaaggtg
     8581 ctggctgccg ccaacaccac ccagaccgac gtcatggaag gcctgaagaa cggcaagaac
     8641 gccgatgccg ctgccaaggt tggccgcatc gtcgctgagc gtgccaaggc cgccggcgtc
     8701 gagaaggttg ccttcgatcg ttcgggctac cgctaccacg gccgcatcaa ggccctggca
     8761 gaagccgccc gcgaagccgg cctgcagttc taagggataa gggcaggggg cctagggtcc
     8821 tctgcccgcc tgctcgccag cctgagtgag gctgggcgac gccgctcttc tgcagcggct
     8881 caccgcaaca acgcagcact ccacaaccat aagcggcccc gagccgtaca tacccaaact
     8941 accaaggaat caaaatggca gaagagcgtc agcagcgggg tcgcgatcgc gaccgtaacc
     9001 gcgaagagaa agtcgacgac ggcatgatcg aaaagctggt cgcggtcaac cgcgtcagca
     9061 agaccgtcaa gggtggccgc cagttcacct tcaccgccct gaccgtggtc ggcgacggcg
     9121 aaggcaaggt cggtttcggc tatggcaagg cgcgcgaagt gccggtcgcc atccagaagt
     9181 cgatggagca ggcccgcaag aacctggtca gcgttgacct gaacaacggc accctgtggc
     9241 acaccatcaa ggatggtcac ggcgcagccc gcgtgttcat gcagccggct tctgaaggta
     9301 ccggcgtcat cgccggcggt gccatgcgcg ccgtgctgga agcggttggc gtgaagaacg
     9361 tgctggccaa ggccaccggt tcgcgcaacc cgatcaacct ggtgcgtgcc accgtgaagg
     9421 gcctgactgc agcgcagtcg ccggctcgca tcgcggccaa gcgcggcaag aaggtggagg
     9481 aactcaacca tggctaatga gtccaacaag actgtgaagg tgcgcctggt gcgcggcctg
     9541 cgtggtaccc agtcgcgtca ccgcctgtcg gtgcgtgcgc tgggcctgaa caagctcaac
     9601 gatgtgcgtg aactgaagga cagcccgcag gttcgcggtc tgatcaacac cgttcactac
     9661 ctcgtcaagg ttgaggagta atcgatcatg actctgcgtc tcaatgaact gagcccggca
     9721 ccgggcgccc gcaccgagcg cacccgcgtc ggtcgcggta tcggctcggg cctgggcaag
     9781 actgccggcc gcggccacaa gggttcgttc gcccgtaagg gtggcggcaa gatcaaggct
     9841 ggcttcgaag gcggccagac ccccatgcag cgtcgtctgc cgaagatcgg cttccgttcg
     9901 ccgatcgcca aggacaccgc tgaagtgctg ctgtacgcgc tggacaagct gccggccggc
     9961 gagatcgact tcgccgccct gcgtgctgcc aagctggtcc cgagcaccgc aaagaaggcc
    10021 aaggtcgtcg tcaagggcga agtgaccaag gcgttcaccc tgaagggtat tgctgccacg
    10081 gctggtgcca aggccgcgat cgaagctgcc ggcggcagcg tgacggagta agaaaatcat
    10141 ggcgcaagct ggcatcggta acctcgcggg cggaatgggc aagttcactg aacttcgcca
    10201 acgtttgctg ttcgtcgtcg gggctttgat cgtctatcgc atcggctgct atgtgccggt
    10261 gccgggcgtc aatcccgatg ccatgcttgc catgatgcaa cagcagggcg gcggcatcgt
    10321 ggacatgttc aacatgttct cgggcggcgc cctgcaccgt ttcagcatct tcgcgctgaa
    10381 cgtgatgccg tacatttcgg catcgatcgt gatgcagctg gccgtgcaca tcttccccgc
    10441 cctgaaggcg atgcagaagg aaggtgagtc cggccgccgc aagatcaccc agtattcgcg
    10501 catcggcgcc gtgctgctgg cagtggtgca gggcggctcg atcgcactgg ccctgcaggg
    10561 ccaggtctcg ccgtcgggcg ctccggtcgt gtacgcgccg ggcatgggct tcgtgctcac
    10621 cgccgtggtc gcgctgaccg ccggcaccat gttcctgatg tgggtcggtg agcaggtcac
    10681 cgagcgcggc atcggcaacg gcgtgtcgct gatcatcttc gccggtatcg tggccggcct
    10741 gccgggtgcg gtcatccaca ccttcgacgc ctaccgcgac ggcaacatcc agttcatcca
    10801 gctgctgctg atcgccatcg tcgtgctcgc cttcaccttc ttcgtggtgt tcgtcgagcg
    10861 tggccagcgc cggatcacgg tcaactacgc gcgccgccag ggcggtcgca acgcgtacat
    10921 gaaccagacc tcgttcctgc cgctgaagct caacatggcc ggcgtcatcc cggcgatctt
    10981 cgcctcgagc ctgctggcct tcccggccac cctggccatg tggtccggcc aggccgccaa
    11041 ccagagcagc ttcggccaga tcctgcagaa ggtcgccaac gcgctcggcc cgggcgagcc
    11101 gctgcacatg atcgtgttcg ctgcgctgat caccggtttc gcgttcttct ataccgcgct
    11161 ggtgttcaac tcgcaggaaa ccgccgacaa cctgaagaag tcgggcgcgc tgatcccggg
    11221 catccgtccg ggcaaggcca ccgccgacta catcgacggc gtgctgaccc gcctgaccgc
    11281 agccggctcg gcgtacctgg tgatcgtctg cctgctgccg gaactgatgc gcacgcagct
    11341 gaacgcctcg ttctacttcg gcggtacttc gctgctgatc gtggtggtgg tagtgatgga
    11401 cttcatcgcc caggtgcagg cgcacctgat gtcgcaccag tacgagagcc tgctgaagaa
    11461 ggccaacctg aagggcggca accgcggcgg ttttgcccgc ggctgatagg cctgttatac
    11521 tttcgtcttc ctgacgtgat ggtccctccg cttcgcggac tccggccaca caaacgaagg
    11581 gcggcccccg cagcggttcc gggtgggggt gtggtgaggt ggtcccgcgc tggagtagcg
    11641 cgggcggccc caggggaaac cccaggtcca accccatccg gcgccggagc ctgggcacac
    11701 tccccaggcc gggttcatga aaccaatggt ttcacgggct tccatgtaaa ccggaacctt
    11761 gttagtatcg ctagttcact tttttgatcc atcctgccgg attggcgtgc ccgaggcgcg
    11821 ctgtcggcca tcactcagct ggagaaccgc gtcatggcgc gtattgcagg cgtcaacctg
    11881 ccagcccaga agcacgtctg ggtcgggttg caaagcattt acggcatcgg ccgtacccgt
    11941 tcgaagaagg tctgcgaagt cgcaggcgtt gcttcgacca ccaagatccg cgatctgtcg
    12001 gagccggaaa tcgagcgcct gcgcgccgaa gtcggcaagt acatcgtgga aggcgatctg
    12061 cgccgtgaaa tcggtatcgc gatcaagcgc ctgatggacc tgggctgcta tcgcggcctg
    12121 cgtcaccgtc gtggcctccc gctgcgtggc cagcgcaccc gtaccaacgc ccgcacccgc
    12181 aagggtccgc gcaaggcgat caagaagtaa gggactgaga aatggctaag cccgctgcta
    12241 agaccaagaa gaagatcaag cgcgtcgtca ccgacggcgt tgcccacgtc cacgcttcgt
    12301 tcaacaacac catcgtcacc atcaccgacc gccagggcaa cgctctgtcg tgggcgacct
    12361 ccggtggcgc tggcttccgc ggttcgcgca agtcgacccc gttcgctgcc caggtggctg
    12421 ctgagaaggc cggtcgtgct gcgctggact acggcgtgaa gtcgctggaa gtccgcatca
    12481 agggcccggg tccgggccgt gagtcggccg tgcgttcgtt gaacaacgtc ggctacaaga
    12541 tcaccaacat catcgacgtg acgcctatcc cgcacaacgg gtgccgtccg ccgaagaagc
    12601 gtcgcgtcta aagggagcga taagaaatgg ctcgttatat cggtcctacc tgtaagctcg
    12661 cccgtcgcga aggcgccgac ctgtccctga agagcccggc gcgtgcgctg gactcgaagt
    12721 gcaagctgga gcagaagccc ggccagcacg gcgccactgc ccgcaagggc aagctgtccg
    12781 actacgccac ccagctgcgt gaaaagcaga aggtcaagcg tatctacggc ctgctggagc
    12841 gtcagttccg caactactac aagaaggcct cgaccaagaa gggcaacacc ggcgagaacc
    12901 tgctgcagct gctggaaacc cgcctggaca acgtcgtcta ccgcatgggc ttcgccgtga
    12961 cccgtccggc tgcccgtcag ctggtgtcgc accgcggcgt caccgtgaat ggcaagtcgg
    13021 tcaacctggc ttcgtaccag gtcaaggctg gcgacgccat cgctctgtct gaaaaggctg
    13081 ccaagcagct gcgcgtccag gaagccctga ccgtcgccgc ccagcatgac ctgagcccgt
    13141 cgtgggttga agtggattcc ggcaagttca ccggcatctt caaggctgtt ccggatcgtt
    13201 cggatctgcc tgcggacatc aacgaagcgc tgatcgtcga gctgtattcg aagtaattca
    13261 tcattggaga gcccccggcg acggccgggg gttcactagg agaacccgca acatgacggt
    13321 taccgccaac caggttctgc gtcctcgcgg tccgcagatc gaacgcctta ccgacacccg
    13381 tgcaaaggtc gttatcgaac ctttggagcg gggttacggg catacgctgg gcaatgccct
    13441 gcgtcgcgtg ctgctgtcgt ccatcccggg cttcgccatc acggaagtcg aaatcgacgg
    13501 cgtgttgcat gagtacacca cggtcgaagg tctgcaggag gacgtgctcg aagtcctgct
    13561 taacctgaag gacgtggcca tccgtatgca ctccggcgac agcgccaccc tgtccctgtc
    13621 caagcagggc ccgggcgttg tcaccgctgc cgacatcaag gtcgaccaca atgtggagat
    13681 cctgaacggc gaccatgtga tctgccacct gaccaaggac acggcagtga acatgcgtct
    13741 gaagatcgaa cgtggtttcg gctaccagcc ggctgccgcg cgtcgtcgtc cggacgaaga
    13801 aacccgtgcc atcggccgcc tggtcctgga tgcctcgttc tcgccggtcc gccgcgtcgc
    13861 ctatgccgtg gaagcggccc gcgtcgaaca gcgtaccgac ctggacaagc tggtcatcga
    13921 tatcgagacc aacggcacca tcgacgccga ggaagccgtg cgcactgccg ccgatatcct
    13981 cagcgaccag ctgtcggtgt tcggtgactt cacccaccgc gaccgcggtg cggccaagcc
    14041 ggccaacaac ggcgtggatc cggtgctgct gcgcccgatc gacgatctgg agctgaccgt
    14101 gcgttcggcc aactgcctga aggccgaaag catctactac atcggcgatc tgatccagaa
    14161 gaccgaagtg gagctgctga agaccccgaa cctgggcaag aagtcgctca ccgagatcaa
    14221 ggaagtgctg gctcagcgcg gcctgtcgct cggcatgaag ctggagaact ggccgccggc
    14281 cggcgtcgcc agccacggca tgctgggctg atatcggtaa tgcctggagg ctccaccggc
    14341 aacggtggag ccttcaacgc aacacaacat gccacgacga accccaggtt cgcgcggcag
    14401 gtcgtccagg acgggcggcc aggaccatcc gcagtccgcg cagcaacgcc aggatggcga
    14461 caacgaacca cacagcctca tcattaacca aggaatatca ccatgcgtca ccagaagtct
    14521 ggccgtaagt tcagccgtac cagcgcccac cgcgaagcga tgttcaagaa catggccgcc
    14581 tcgctgttca agcacgagct gatcaagacc accctgccga aggccaagga actgcgccgc
    14641 gttgccgagc cgctgatcac cctggccaag gtcgactccg tcgccaaccg ccgtctggcc
    14701 ttcgcccgcc tgcgcgacaa cgaagccgtg ggcaacctgt tcaccatcct gggcccgcgc
    14761 tacgcgaacc gtccgggcgg ctacctgcgc ctgctgaagt gcggcttccg cgccggcgac
    14821 aacgcaccga tggcctacgt cgagctggtt gaccgtccgg tcgtggccga agaagtggcc
    14881 gagtaatcgg accgctccaa cgcgacacag cgaaagcccg gcctctgccg ggcttttgcg
    14941 tttccggggt tgctgggcgc tgcctgcaac ccacaccgtt ccgacaggcg tcacctgtgg
    15001 cggttcgaat ggcgcgcact ctcggttacg cttggcgcct gatccattcg agcgttgacg
    15061 atgaatccac tgcgctggcc cttccgcgcc cagttcttcc tgggcttcct gatctgtgcg
    15121 ggcctgctgg gctacgcgat cttcctgcag ttgaagatgg gcctggagcc gtgcccgctg
    15181 tgcatcttcc agcgcctggc attcgccgcg ctcggcctgc tgttcctgat cggcgcgctg
    15241 cacgggccgt ccaaccgacc tggccgcgcg acctatggcg tactggcctt catcgccgcc
    15301 gcggtgggtg tcggcatcgc cgcgcgccac gtctacgtgc agatgctgcc gccggagatg
    15361 ggcgcgacct gcggcccacc gctgagcttc ctgcgcgaga ccatggggcc actggaagtg
    15421 ttccgcacgg tgctgaccgg taccggcaac tgcggcaaca tcgactggac gttcctgggc
    15481 ctgaccatgc caatgtggtc gggggtgtgg ttcgtgctgc tggcgctgtg ggcgctgctg
    15541 gtgtcgctgc gcaaggtcaa gcgctgaagc aaggtaatgc cggccagcgg ccggcactac
    15601 cacggtccgt cctcagaagt cctgctgcag gctcaggtag gcgccgcggc gcgggcccca
    15661 ttgcggggcg aacacgccga caccgccgcc atcgcgcagc tggtagctgc gatccagtgc
    15721 gttgatcagc gccagctgca catgcagcgg gtggccgctg tcggcgttga agtcgtggcc
    15781 tgcactgaga ttgacctgca ggtacgacgg cagctcgccg ccattgggca cgccctcgat
    15841 gtccgaacgc aggccgctgc cgaacacgta gttggcaccg atccggttgt ggcccgcgaa
    15901 ggcgtagctg aagccgcccg acgacgtcag cttctggtcg tgatccaggt ggatccagtg
    15961 gttggccacg taggccaggg cttccgggtc caggttgtac tgcccggtga tgacgtcggt
    16021 accgatggcc ttgttcaggg cggcattgag gtaggcgctg aacgggccgt tgctgtagtc
    16081 ggcactgaat tccaggccgc ggatgtggcc gcggcgatag ttgaacgtcg aatagatgta
    16141 ggcggcgccg aactggcctt catcctgcag ccgcgcgacg cggcggtcat acgcatccag
    16201 gcccagtgtg aggtgttcac ccagctgctg cgagacgccg atgtcgtagt agtcgctgcg
    16261 ttcggccagc ggaatgttgt tgccgccgct gggctgctgg ttggtggtgc cgtcgtagag
    16321 ggcgatgtcg ctgctggcga tcagctcact ggccggaggc gtgaagtagc gcgagtagcc
    16381 ggcgtgcacg gtggtgctgt cgctggcatt ccagaccacg ccgacgcgcg ggctgagctg
    16441 gccttcggtg cgcccaaagg ccttgtaacg gtcaccgcgc aggccgtagt tgacggtcca
    16501 gtcgtcgccg atcttccatt cgtcctgcac gtacagcgcc agcgtgctgg cgtggaaggc
    16561 gctgcgatcg ggaatcagca gcggcgtggt gctggactgc tggccggcgt cgtcgaccgg
    16621 gaacacccag ctgttgttgc tggcccgcgc gttctcgtag ttgccataca ggccatagcg
    16681 cagcgtgtgg tcgttgccca gcggcgtgga gaagtcggcc tgcagggtat tggcgcggtt
    16741 gctgcgctgg acctgtgagg cgacgccgct gaacaccagg tcgctcacca cgtccgggtt
    16801 gaatcccaca tcgctgtaac gctgcccggc cgagagctgg taggcggtgc tgcccagcgt
    16861 gccctgcagc accagcatgc cgaagcgggt ggtctcgcgc tgggtctcat ccagctggct
    16921 ggagtcgaag gtggtggtgt cgagatagcc gaactgcggt gtctggcccg gattgaccgg
    16981 gatctggaag cggttgttgg cgaagccggc gaatacgctc aggcgggtgt tgtcgttgac
    17041 cagataggtc aggtcggcga aggccttgcc ctggtgggtg tcgtcgtgca gcggcttgcg
    17101 cgagggggtc ggattttcca ggccgacctc gttctggtcg tagttgccgg tcaggaacca
    17161 gctccaacgg ccctggttgc cccaccatga ggcattcgga ttgagcttgc cgaacgagcc
    17221 ggcagtgagg cccgcgctgc caccattgcc acgttcggcg ccattgcgcg tagtgatgtc
    17281 gaccaccgca gcggtgcgct cgccgaactg cgcaggcaga gcgccatcca tcaggcggat
    17341 gctcttgatg gtgcgtgcat ccagggtctg gccaaagccg gagatcgatt cgggcagcag
    17401 cacgccgttg atgcggtact gcaggttggc gtggtcgccg cgcacatgca cgccgccgta
    17461 cgaatcctgg accacgcccg gcgcctgcaa cagcacctgg ctgagtggcg cagacgcacc
    17521 cagcggctgc ttctggatgt cctcggcggt gatctggtac tggctgctgc cgatatccgg
    17581 cgacagcatg ttgcgggcct ggtcgagctg agcgtggacg gtcacggcgt ccaggtcctt
    17641 gaccggcgcg gaggtgtcgt cggcagctgc ggcgaaggcg ggcaggctgg ccagagccag
    17701 ggcgagggtg atgccggtag cgagcaggga gggcttcatg gcgatgggct gtggaagggg
    17761 ccggtcgggg aatgtggagt gttacttcgt aacagtgcgt ggcgaatcat gcgcctgccg
    17821 ggacggccat ggccatgcgg tttgtggccg atcgcgatgc cctttccccg gcgttcagcc
    17881 atgtgcagac cacgcccggc cctttgcgac agcggtcggc tctgcgacca tgaacgtccc
    17941 ccacctccgg aagtctgcaa tgagcctgtc cgccgtttcg cctgtccccg atcctgccgc
    18001 gaccgtcgct ggcgctgcct ggtcgccgga gagctggcgt ggcaagaccg cgctgcagat
    18061 gccgacctac ccggacccgg tcgcgctgga tgcggccctg cacgagctga agcggctgcc
    18121 gccgctggtt acctcgtggg agatcctggc gttgaagcag cagttggccg aggcgcagga
    18181 gggcaagcgc ttcctgctgc agggcggtga ctgcgcggag aatttcagcg actgcgaatc
    18241 gggcaccatt tccaaccggt tgaaggtgct gctgcagatg agcctggtgc tggtgcacgg
    18301 cctgcgccaa ccggtgatcc gcgttgggcg ctttgccggc cagtacgcca agccgcgttc
    18361 ggccgatacc gaaacccgcg atggcgtgac cctgcccagc taccgtggtg acgtgatcaa
    18421 tgcgccggct ttcaccgaag cggcgcgcct gcccgacccg aagcggatgc tgcaggccca
    18481 cgcgcattcg gcgatgacga tgaacttcgt gcgtgcgctg atcgatggcg gcttcgccga
    18541 cctgcaccat ccggagtact ggaacctgga gtgggtaagc cactcgccgc tggccgccga
    18601 gtaccagaag atggtggcct cgatcggcga tgcggtgcac ttcatggaga ccctggccgg
    18661 ggcccgcgtg cacaacctca atcgcatcga tttctacacc tcgcacgaag cgctgctgct
    18721 gccctacgaa caggcgctga cgcggcaggt gccgcgtcag cagggctggt tgaacctgag
    18781 cacgcattac ccgtggatcg gcatgcgcac cgctgcgctc gatggcgcgc acgtggagta
    18841 cctgcgcggc gtgcgcaacc cgatcgcaat caaggtcggc ccgtcggtga cgccggacca
    18901 gctgctgcgc ctgatcgatg tgctcaaccc gcatgatgaa cccggccgcc tgagcttcat
    18961 ccatcgcatg ggtgcggcgc agattgccga gaagctgccg ccgctgctgg atgcggtcaa
    19021 gcgtgatggt cgccgtgtgc tgtgggtatg cgatgcgatg catggcaata ccgagagcac
    19081 tgccaatggt ttcaagaccc gtcgtttcga caatgtgcgc ggcgaggttg agatgtcgtt
    19141 cgacctgcat gcggccgcag gcacgcgtct gggcggtgtg catctggagc tgaccggcga
    19201 ggatgtgacc gagtgcaccg gtggcgcgcg cgagttgacc gagcgcgatc tggagcgtgc
    19261 gtatcgttcg acggtggacc cgcggttgaa ctacgagcag tcgctggaga tcgcgatggc
    19321 gatcgtgcgc aagcaggaac aagtgcggta agggtttttc ggcagggctt gcagccctgc
    19381 acctgctaca agccagatca acgtcaaagt cgggcattcc gggggatgct ggggcggtgt
    19441 cggagtgcgg ggacgccgca agtacgtcca tgtaggcttg gcagccgcat ccatgcggct
    19501 gacaccccgc acgccgacac cgccccacct ctgacagatt ccgatggctg tcggtaggtg
    19561 tcgaccttgg tcgacacacg ccatgcgtgg atgctcttcc gaattcgctt tggtgggtgc
    19621 cgaccgttgg tcggcatgcc tcagcccttg aaccgcaggc ccacgcccgg ttcggtgaac
    19681 aggtagcgcg aatccagtgc cgaatcgccc agcttgtgcc gcagcttgcc gaccaggatg
    19741 cgcaggtagt gggtgtcgtg ctgatgggtc gggccccaga tctcctgcag gatctgcggc
    19801 tgggtcacca cccgcccggc attgcgcagc agcagcgaga gcagtgcata ttccttgcgg
    19861 gtcagcgcca ccggctcgcc atccagcgcc acttcacggc gcaccagatc cacgtgcagg
    19921 tggccgtcat cgaacaccgg tggcgtgcca tcactgggca cgctgcgggt gcgtagcagc
    19981 gcccgtaccc gcgccatcag ttcctgcgtg ccgaacggct tggtgacata gtcattggcg
    20041 ccggtatcca gcgcccgcac cttctcggcc tcgccggcgc gcacggtcag catgatcacc
    20101 ggcacctggc tccactgccg cagctgttca agcacctcgt ggccttccat gtccggcagg
    20161 ccgatatcca ggatcaccag gtccatgtcc tcgctggcgg ccagctgcag gccttcctgg
    20221 ccggtggccg cctgccgcac ctggtagccc tgcgcgcgca ggctgatgtc caggaaccgg
    20281 cggatctggg tttcatcgtc gatcaccagc acgcgcgcgg ccggcacgct ggcatcaatc
    20341 agggtcgggc tcatcgtggg aggctggctt gagcaggggc agggtgatgc ggatcagggt
    20401 accgcgaccg tcgcgtccgg gcagcgcctg gacgctgccg ccatgcgcgc cgatcatgcc
    20461 ctggcagatg gtcaggccca ggccggtacc gtggcggcca cggtcgccgc gctcgacgct
    20521 gtagaacatg tcgaagatgc gcgcgcgctc gtcgtcggga ataccggggc cggcatcgat
    20581 cacgtcgatg cgcagctggc catccagctc gcgcgcctgc acctgcacgg cggcatccgg
    20641 cggcgagaac ttggcggcgt tctccatcac gttgaacacg gcctgttcca ccagcgccgg
    20701 gtgcacccag atcggcgcca gcgtggacgg aatgtccagc tccagccgca ccttgggctg
    20761 gtagcgctgc aggcgccgcg cggcggagcc gatcagttcg tccacgccga tccagtcgcg
    20821 gttgatcttc agcccttcgt ggccaagccg ggtcatgtcc agcaggttct ggatgtagcg
    20881 gtccaggcgt tcgccttcga ccaggatggt atcgagcagg gcacggcgat cagccgtatc
    20941 catcgccgcg ccatagctgg ccaggctgtc ggccgaaccg atcatcgccg ccagtggcga
    21001 acgcaggtca tgcgataccg atgagagcag cgccgagcgc agccgctcgg tctcgttgct
    21061 cacatgggcc tgctccagct ctgccaccaa tcgcgtgcgc agcgcggcct gggcgatgtc
    21121 gtcgaccatc gcttcggcca gctgccgctg ctctggcagc aggcgtgcct gcgcgccggg
    21181 caggtacagg ccggccacgc cgatcgcatg gtcttcgcca tccagcagcg gcaggaacca
    21241 ccattgcgcc cctgcgaggg tgtcggtgaa gcgtccgctg ggctggccgt ggcgcagcgc
    21301 ccagtcagcg gcggccagat cggtgtcgcc gggctggctg cggcccccgg ccgcggtatc
    21361 ggtgccgatc cgcagccacg ccggcacatc catggcctgt tccagcgcat gccggccggc
    21421 ctgtgccacc tcgccgttgc cggcggcgct ggccagctgc cggcccagct gctggcgcgc
    21481 gcgcgcgtgg cggttggccg cgcgcagcgc gatcacctgc atgcgcagcc gcgaggccag
    21541 gcgtccggcc accagggcgg cggccaggaa caggaagacg gtgatcacac cctgccgtgc
    21601 accgatggca aaggtgaagc gcggcgcgat gaacaggaag ttgtaggcga ggaagcacag
    21661 gatcgccgcc atcaccgcca cgctggcacg cgtgcgtgcg gccaccagca ccaccgcgac
    21721 gatgaacacc atcgacaggt cggccatgcc cacccaacgc tcggccagcc aggccaccac
    21781 gcaggccagc gccgtggcga tcagtgcctg caccggctcg tggctgaagc cacgcaccgg
    21841 tgccatcagc ccctcgcggc gcgagcgtgc acgtgcctgc ggcgtgctga tgatggtgat
    21901 ctcgtagtgc gcgccgcgct ggatcaactg ttgggtcagg gtgcggttga acatccgtgc
    21961 cagcggtcgc tcgcgggtgc ggcccagcac cagggtcgac acgccattgt gtgcggcatg
    22021 gtcgagcagg gcatcggcga tgctcgatcc atgcagcagt tcagcatcac cgcccaggcg
    22081 ccgcgccagt gcgaaggccg catcgatctc gcggcgggtc gcatcatcct ggcgacgccc
    22141 ctgcacggtc accaccgtcc atggcgcatc gcggcgttcg gcgatgcgcc gtgccacccg
    22201 caccaggtac tcgctctggc cgccgccatc gatggccacc agcacgccgc ggcgcagtgg
    22261 caggttgcct tcaccgcgtg cggcgcgggt ttcgcgcagg ctgctgtcga cgcggtcggc
    22321 ggcttcctgc attgccagtt cgcgcagggc ggtcaggttg gccggcgaga agaacgcctg
    22381 cagcgcctgc gtggcctgct cgggcacata gaccttgccc tgctgcaggc gcgcgatcag
    22441 ttcgcgcggc ggcaggtcga ccagcacgat gtcatgcagg cggtcgagca cgccgtccgg
    22501 cacggtctcg ctcacacgca cgccggtgat gcgcatcacc acgtcgttga ggctttccag
    22561 gtgctggatg ttgaccgtgg tccagacgtc gatgccggcg tccagcagtt ccatcacatc
    22621 ctgccagcgc cgctcatggc ggctgcccgg cgcgttgcga tgggccagtt catccaccag
    22681 caccagtgcg ggatgccggg ccagcacggc atccaggtcc atctcctgca gggtgtggcc
    22741 gtggtaggcc acttccttca gcggcagctg cggcaggcct tccagcaacg cctgggtatc
    22801 ggcgcggcca tgggtttcca ccaggcccac caccaggtcg acgccgcggc gcagctgttc
    22861 ctgcgcgcgg gtcagcatgg tgtaggtctt gcccacgccc ggtgccgcgc cgaggaatac
    22921 cgtcagcttg ccgccggctt cgcgttgcag gccttcgacc agggcatcgg cctggcgggt
    22981 acgtgcatca gtcatgggtg ccgctgtcat ggccgccatt gtgcgcgcag cgggtgcagg
    23041 ccggcatcac ggcgccttgg cggcgtggtc cagcgcgaag ttcagcgtca ccacgttcac
    23101 ccgtggctgg ccgaacaggc cccactggcg accttcggta tgcgcctgca ccagcgcctg
    23161 cacacgttcc accggcaggc cacgggcacg tgccacgcgc gccacctgca gctgcgccgc
    23221 ctccggcgac agctgcggat ccaggccgcc tgcggactgg gtgaccaggt ccgccggcac
    23281 ctgcgccggg gccacgcctt cgcgtgcggc caccgccgcg gtgctggcgg ctacgcgttc
    23341 ggccagcgcc gggttgctgc gcgccatgtt ggagcccgct gcggccatcg gatcgtagtt
    23401 ggcggccgac ggccgggcct ggaaatagcc atcgccggtg aacggctgcg acagccacgc
    23461 cgagccgcgt acctggccgc tgccatcacg cagcaggctg ccttcggcct gggtcgggta
    23521 ggccaggccg gcgaaaccgg tggcgatgcc agcgtagacc gcgccggcca gcaacagcgt
    23581 ggccaggccc aggccgatgg ccgggcgcca gctggcgcca tcctgcaggc cggccacgcg
    23641 ggcctcggcc ttggcttcgc gggacaggga agacgaagtg gaagcagaac ggttcatgcg
    23701 ccgaatacca ggacaagaag gaggtcgatc agcttgatcg ccgcgaacgg cagcagcacg
    23761 ccgccgaggc cgtacaccag catgttccgg cgcagcagcg cggtggccgt ggccgggcgg
    23821 aagcgcacgc cgcgcagggc gagcgggatc agtgcgggaa tcaccagcgc gttgaagatc
    23881 agcgcggcca gcaccgcgtt gcgcgggctc gacagctgca tcacgttcaa ggcggccatg
    23941 gtcggcaccg cagcggcaaa cagcgccggc aggatcgcga agtacttgga gacgtcgttg
    24001 gccagcgaga aggtggtcag cgcgccgcgg gtgatcaact gctgcttgcc cacttccacc
    24061 accgccagca gcttggccgg gtcagaatcg aggtcgacca tgttgccggc ctccttcgcc
    24121 gcctgcgtgc cggagttcat cgccaggccg atgtcggcct gcgccagcgc gggcgcgtca
    24181 ttggtgccat cgcccaccat cgccaccagg cggccgccgg cctgctcctg gcggatgcgc
    24241 gccagcttgt cttccgggcg tgcctcggcg atgtagtcat ccacgccggc ctcggcagca
    24301 atggcggcgg cggtcagcgg gttgtcgccg gtgatcatca ccgtgcggat gcccatcgcg
    24361 cgcagctgcg cgaacttctc gcgcatgccg tgcttgacca cgtccgacag ctcgatcacg
    24421 cccagtacgt ggcggccctc ggccaccacc agcggggtgg caccgttgcg tgccacctgc
    24481 tcgacgcggc cggccagctc ggccggcacc gtgccgccca gcgcctgcac gtggttgcgg
    24541 atcgcatcca gtgcaccctt gcggatctgc cgcccatgtt ccaggtccac gccggacatg
    24601 cgggtctgcg cactgaaggc cagatagtcg gcatggtccg gctcggcggt ggcgcagccc
    24661 tgctcgcggg ccaggcgcac gatcgacttg ccttccggcg tcgggtcggc cagcgaggac
    24721 agcagtgctg cttcacgcag ctggctggcg tcgatgccgg ccaacggatg gaagtggctg
    24781 gcctggcggt cgccgtaggt gatggtgccg gtcttgtcca gcagcagcac gtcgacgtcg
    24841 ccggccactt ccaccgcctt gcccgacttg gccagcacgt tggcggccag cgcacggttc
    24901 atgccggcaa taccaatggc cggcagcagg ccgccgatgg tggtgggaat caggcacacc
    24961 agcagcgcga tcagcagcag cggatcgacc ttgacgccga ccgcagcacc gatcgccggc
    25021 agcgtcgcca ccactaccag gaaggtgagc gtcatcgccg ccagcagcag ggtcagcgcg
    25081 acctcgttcg gggtcttctg ccggttggcg ccttccacca gcgcgatcat ccggtccagg
    25141 aagctgtggc ccggttcggc ggtcacccgc acgataatct ggtcggacag caccttggtg
    25201 ccgccgatca cgccggaacg gtcggtgccg gcctcgcgca gcactggtgc cgattcgccg
    25261 gtcaccgccg cttcgttgat ggtggccagg ccctgcacga tctcgccatc ggccggcacc
    25321 agttcaccgg cactgacgat cacatggtcg cccgggcgca gctcggcggc cggcacctgg
    25381 gcttctgcgg cgccgggctg cggcgccacc agccgacgcg ccaccaggtc ctggcgggcc
    25441 cggcgcagcg aggcggcctg gccgcggcca cgtgcctcgg ccacggcctc ggcgaaattg
    25501 ccgaacagca cggtcaccag cagaatcgcg gtcactgcca ggccgaagcc cagcggcgca
    25561 ttgccggtca gggtgacgat ggcggcgacg atcgtgccgg ccatcaccac cgccatcacc
    25621 gggctgcgca ccagatgcat cggcgacagc ttgcgcaccg cttcgaccag cgcacggcgc
    25681 aggccggcgc catcgagcag ggcagggcgt ggcgcatggg tactacgggt tgaacttgca
    25741 tgactactca tgggggtgtc ctcagtgcag tcccaggctc aggtggtcgg cgatcgggcc
    25801 gagtaccagc gccggcatga actgcagcac ggtcaggatg acgatcaccg agaccagggt
    25861 cagggcgaag gtcggggttt cgatctgcag gctgccggca gattccggcg cctggcgctt
    25921 ggcagccagc tgtgcggcca ccaccagcgg aatgatcagc agcgggaagc ggcccagcag
    25981 cagtaccagc gagcagctca ggttccacca cagcgtggcg tcacccaggc cttcgaagcc
    26041 cgaaccgttg ttggcatagg ccgagacata ctcgtagaag acctggctga tgccatggaa
    26101 gccggggttg gaggtgccgg ccaggccggg cacggccagg gtgatcgcgg tgaacaccag
    26161 cagggtgatc ggctgcagca gcaccagcag ggccagcagg cgcacctgcg gtgtctccag
    26221 cttgcggccg aacagttccg gcgtacgccc ggtcatcaac ccggccagga acacgcccag
    26281 cagcaggtag acgatgaact gctgcaggcc gcagccgatg ccgccccaga tcgcgctgac
    26341 cagcatgttg accatcgcga tgccaccgct cagcggcgcc agcgaatcgt gcatgccgtt
    26401 caccgagccg ttggagacct gggtggtcac cgccgcccac agcgcggtgc catcggcgcc
    26461 gaagcgcacc tccttgcctt ccatcagcag cggggtggcg gcgctggcgc tatggccttc
    26521 gctccacatc atcgcgccgg tcgacagcag cgacatgccg agcatgcagc tgaacaccag
    26581 ggcgccgaag cggcggcggc cggtgaaggc accgatcatg aagatcaccg ccatcggtat
    26641 cagcaggatg ccgacgacct ccagcgcgtt cgacagcggg gtcgggttct ccagcgggaa
    26701 gctgctgttc gggccatacc agccgccacc gttggcgccc agctgcttgg ccgcgaccat
    26761 cgccgcgacc gggcccagcg gcagtttctg cccggccatg ccggcgctgg catcgatcgg
    26821 cgtggcctgc gggccgccgg ccagggtcga cggtacgccc tggctggtca gcagcagggt
    26881 ccagaccagg cacagcggca gcaggaagcg cacgcacagg cgcaccacgt ccacgtagta
    26941 gttgcccacc gccacctggc ggtcatcgcc ggtaccggtc gccgccgcag cctgcggcgc
    27001 acgcgcaaac agcgcccgca gcgtcgccac ggccaacgcc agccccatca tcggcgtcac
    27061 cacctgcagg ccggtgatgc cggtcatctg cgagagatag gacagctgcg cctggcccga
    27121 gtagtgctgc tggttggtgt tggtcaggaa cgagatcatc gtgtgcagcg cggtgtccca
    27181 gcgcatgttc gggatctggt ccgggttcaa cggcaaccag gcctgggtca tgaacaccgc
    27241 ctgggtcagc accgcgacca ccacgttgct cagcacgaag gccagcgcat agccgcgcca
    27301 ggacatcgaa cgcgacggat cgacgccgaa taccttgtac agcggctttt cgatccagtg
    27361 gaacagcacg tcgaccttca tcggcgcacc gcgcatcacg cgcgccaggt acaggcccag
    27421 cggccacgcc agcagcaggc tggcagcaat aatgacaagc atctcagtca tggtcggctc
    27481 cgtcagaacg actcgggccg aagcacgaca tagagaagat aggcggcggc gaccagcacc
    27541 agcacgccac acaacaacga cagccagggg gacattgcaa tagcgtcctg gtggaacccc
    27601 tccacctcag gccgccatcg tcgtcctgcc tcccataaac gcactacgcg ccgtaccggg
    27661 ccgacgcgta aagtgtgcat aaattcgctg ggccaacccg taaccaggcc ccgggtagcg
    27721 ccgggccacg cccggtagtg ggagcctcgt cagccggccg gtgttgccgc cggcgccagc
    27781 cccttcagct cgcgatagcg ctgcaggctg ctgtcgatct cggccttcag ggcctgctgc
    27841 tgttgcacga acccggcctg cagccgctgc tgcgcctgca gctgcacgtg ccgctggcgg
    27901 atcgcttcgg cctgcttgcc ggccaccttg ccgccggcca gttcgcgatc gccggcagcc
    27961 gccagcagcg ccaccagcga ttcacgcagg ctggtgacgt tgtactcggc cgtcttgagg
    28021 ttgttgtcca gcacttcctg gcgttcggcg aacacccggc gcaggtcgtc ctcgctgcca
    28081 taggtggtca gcatcgcctg ctcggtgcgc tggcgggtct gtgcggccat caggtccagc
    28141 tgccgctgcg ccgcttccgt gctggcggcg gcgcgttcct cgtcggtcaa cgcgcgctgg
    28201 acctgcgcat tgcgcaggcc actctttgcg ttgaactcgt cgcgggcatg gttgaccgcg
    28261 tcggccggca gcgaatcgct gcagatccgc tccttgccct cgttccagca gtacagcttc
    28321 ttctccacct tgccaccgcc ccgcggttgc gccggaacgg agaacggcac ggccagcagc
    28381 aggccggcaa agagcacagc aggaactcgg gacatgacct ttcccctggg tcggtcagcg
    28441 ggtcgaacgg acgccgtact gggcccggta ggcttccagc ggctgccggt aacccacaag
    28501 ttccgggttg ccggaggcga aatcaagcag gtcagccagc gacgccacgg cgatcaccgg
    28561 aatgccggcc tcttcggcca ccgactgcgc ggcggagcgg cggtcggatt ccgaggcgat
    28621 ctcctggcgg tccagcgcca ccacgatgcc ggccggcgtg ccaccggcgg cgcggatgat
    28681 gcccagtgct tcgcggatcg cggtaccggc ggtgatcacg tcgtcgacga tcagcacgcg
    28741 cttgccattc atgtcggcgc cgatcagctg gccgccttct ccatggtcct tggcttcctt
    28801 gcggttgaac gacagcggca ggtcgcggcc gcgctgggcc agctcgcagg ccatcgcggt
    28861 ggccagcgga atgcccttgt aggccgggcc gaacaccacg tcgtacttga tcccggtggc
    28921 gtcgatggca tcggcgtagc aggcgccgag ctgcgacagc agcgaaccgg agtcgaaacg
    28981 accggcgttg aagaaatagg ggctcagccg gccggacttg agggtgaact ggccgaagcg
    29041 cagggcgtcg gcggtcaggg ccagctgcag gaaacggtgg cggtggtcgc tcatcaaaac
    29101 tcgattcatc ttcatttgga gcacaaatcc taatccagct gggcgtttcg cgctcgtctg
    29161 gccctgggtg agggccgttg cgcccccctc tggcggactg cgcagccctg cgggcaaccg
    29221 gtatgcttgc ccggtttccc gccgcaggtc ccccgcatgc gcatcatcag tttcaacgcc
    29281 aatggcatcc gttccgccgc aaccaagggc ttcctcgatt ggttccgcgc ccaggacgcc
    29341 gacgtcctgt gcatccagga gaccaaggcc caggaagacc agctgaccga cccgatgttc
    29401 cgcccggacg gccaccactg cttctaccgc gacgccatca ccaagaaggg ctacagcggc
    29461 gtagcgatct acagcaagcg cgagccggac caggtcatca cctcgctggg ctgggccccg
    29521 ttcgacgacg aaggccgcta catcgaggcg cgctacggca acctcagcgt ggtctccttc
    29581 tatatcccgt ccggcagctc gggcgacctg cgccagggtt tcaagttcga agtgatggaa
    29641 tggctgcggc cgatcctcga ggaatgggcg cgcagcggcc gcgactacgt gctgtgcggc
    29701 gactggaaca tcgtccgttc ggcgctggac atcaagaact ggaagtccaa ccagaagaac
    29761 tccggctgcc tgccggaaga gcgcgactgg ctcaacgccc tgtgcgccga ccacggccag
    29821 gccaccgatg tcgccgccgg ccgcggctgg gccgatgcct accgcctgct caaccccacc
    29881 ggcgaggact acacatggtg gagcaaccgc ggcgccgccc gcgccaacaa tgtcggctgg
    29941 cgcatcgact accagttcat caccccgggc ctgcgtgacc gcctgcgcag ctgctcgatc
    30001 tatcgcgacg agcgcttctc cgaccacgcg ccgttcatcg tggactacga cctgtgaccg
    30061 aggccgccac gccggtcagc tacaagggct gggcaggcat caagcgcgcc ttcggcaccc
    30121 cgtcggcgct gaccatggcc atgctcggct tcggcagcgg cctgccgttc ctgctgatcg
    30181 cctcgcagac cctgtctacg cgcctgcgcg acgtcggcct ggacctgggc agcatcggcc
    30241 tgatcagcct ggccagcttc ttctacctgc tcaagttcct gtgggcgccc ctgctggatc
    30301 gctatgcctt cccgctgctc ggtgggctcg gccgccgccg ctcgtggctg ctggtgtcgc
    30361 aggcgctggt cctggtcggc ctggtcgcgc tggccttcgt gcgccccgag cagggcgtct
    30421 ggccgctggt ggcctgggtg ctggtggcct cgttcgccgg cgccacccag gactcggccg
    30481 tcgacgccta ccgcatcgag atcgcaccgc aggcggcgca ggccgcgctg gcggccacct
    30541 atacgctggg ttaccggatc ggcctgatcc tggccggtgc cggcgcgctg tacctggccc
    30601 agttcgaagg ctggatcgtg gcctatctgg ccatggcggc gctgatgctg ctgccgatcg
    30661 tcaccacgct gctgtgcgcc gaaccggaac gtccggccac gaccgtgcag cgccgcatcg
    30721 atgtcgccga ggcgttcgtc cagcccatca ccagcttctt cagccgcaac ggcgtggcgc
    30781 tggcgctggt gctgctggcc ttcgtcgggc tgttcaagtt cccggaccag gtcatcggcg
    30841 tgatggccgg gccgttctac ctcgactccg ggttcgacaa ggccgacatc gcgaccgtct
    30901 ccaagctgtt cggtgtgtgg atgggcatcg gtggcgcctt cctgggcggc atcgcggtgg
    30961 ccgcgttcgg tttccgccgc atgctgctgg tggccgcgct gggcgtggcg ctgtccaacc
    31021 ttgcgttcct gctgatggcg cacaacccgg gcaagctgtg ggcgttctat gccgcgctca
    31081 gcgccgacaa cctgttccag ggctttgccg gcaccgtgct ggtggccttc atgtcgtcgc
    31141 tgaccgaccg caacttcact gccacccagt acgcgctgct ggtctcgctg gccaacctgc
    31201 ccggcaagtt cgtcggtggc gtttccggct atatcgttga agccacctcc tacagcacgt
    31261 tcttcatcct cagctcggtc accgtggtgc cgaccctgct gctgctggcc tggttgtggc
    31321 cgcggatcgt ggatcgcggg ccgccgccgg tcgcctgatt gcctgtacgt ccggtctgcg
    31381 ggatcatcgc cccgacgcgc cgagggggcg gtgccttgcg aacggggaag tgagcatggc
    31441 cgacgttgtg ctgcgggacc tggacccgct gctgctggac cgtatccgtc gagtcgcggt
    31501 tgcccgcggc tggacccacg aacagacctg cgcggccttg ctggagcagg gcctgttcag
    31561 cagtgaactg gaggtccgct ccggcttcgg cgatcccgaa gtggacgccc tgtccgatgc
    31621 catcgccgcc ctgcaggccc tgcccgcagg gcaggggttt gattagcgcc tttgtagcgt
    31681 cgagccatgc tcgactgctt ctgctcacgc caggtggatc gcgcccagaa tccgcgggcc
    31741 ctgcgccccg gtcacgctcg gcaggttgcc ggccagcccg tccatcgtcc gctgcgccag
    31801 ccacgcaaac cccatcgcct ccacgtactc cgggtccagc ccgtgcatcg cactggactc
    31861 cacctgcacc tccggcagcc gtgccgccag ccgcttcatc agctgccggt tgcgcacgcc
    31921 accgccacag accagcaggc gccgggtctg cggctgctgc gccagcagtg cgtcggccac
    31981 cgtcgccacg gtcagctcca gcagggtcgc ctgcacgtcg gcggcggcgt attcgccttc
    32041 gcccatgtgc gcctcggccc aggccaggtg gaactgttcg cggccggtgc tcttcggtgg
    32101 cggtagtgcg aaccacgggt ccgaacgcca cccggccaga aggctgtcgt ccactgcgcc
    32161 actggcggca tacgcgccgt cggcatcgaa ggtgcggccg gtgtggcgct gacaccaggc
    32221 gtccatcagc gcgttggccg ggccggtatc gaagccacgc accgcgcctt cgcgcgggat
    32281 cagggtcagg ttggcgatgc cgcccaggtt cagcaccgcg cggtcttcat cggcggtgcc
    32341 gagcatgccc aggtggaagg ccggcatcag tggtgcgcca tggcccccgg ccgctacgtc
    32401 gcggcggcgg aagtcgcaca ccgtggtgat cccggtcagt tcggcgatgc ggttgccgtc
    32461 gcccagctgc acggtgaagg ccgggtcggc cagcggccga tggcgcacgg tctgcccatg
    32521 cgagccgatc gcccgtacct gcgccgggtc cacgcccgcc tcggccagca gctggttggc
    32581 ggcgtcggcg aagctgatcg cgatccgcgc atccagctcg cccagttcct ccagcgagtc
    32641 cagtggaccg ccttcgccca gtgccaccag ccgtgcgcgc agcaccggct cccagcgggt
    32701 ggtcagcccg tgcacgaagc ggcagccgcc agtggtgggg aactgcacca gggcagcgtc
    32761 gatgccatcg gcgctggtgc ccgacatcag gccaaggtac aggggggcgt cagcgtcggc
    32821 agtggtgttc atggcaggca taaaaaaagg acgcggcaag cttgggctgc cgcgtccttc
    32881 ttcgtcaacg caggggctca gccgcgcttg cggccggcgc tgctcttgtc cttggcgctg
    32941 gccacctcgg gtgcggcctc gtcgcggctg gtcggggccg ggctggcgtc ggcgtagatc
    33001 agcttctcca tgccctggat gcgtgccatc gctggcgcgg tctgcgcacg gaaggccacc
    33061 agctcggcgc ccttcaacgg ttccggcggc ggcatggtca ccgtcagcgg gttgcggtgc
    33121 tcaccgttga cgcggaattc gtagtgcagg tgtgggccgg tggccaggcc ggtcgagccg
    33181 acatagccga tcaccgtgcc ctgggccacg cgctggccgg tcttgatgtt cgcaaagcgc
    33241 gacatgtgcc cgtacagggt ggtgtggccg cggccgtggt cgaggatcac cacgttgccg
    33301 tagccgcgct gcacgccggc gaactgcacg cgggcatcgc cggcggccat gatcggggtg
    33361 ccggtgcgcg cggcgtagtc cacgcccttg tgcatgcgca tcttgcccag caccgggtgc
    33421 ttgcgcgcgc cgaaggtcga gctcagccgc gcgaacggga tcggcatgcg gatgaagctc
    33481 ttcttcagcg aacgcccgtt gatgtcgtag tactcggact tgccgttgcg gtcgaagcgg
    33541 aagccggaat aggtcttgcc accggtggtg aaggtcgccg ccaggatctt gctggtgtcc
    33601 accttctcgc cttcgcgcca ggtttcatcc atcaccacgc tgaagcggtc gcccggctgc
    33661 aggtccttcg agaagtcgat gtcgtacttg aagatgtcgt cggtcatcgt cgcgatcgcc
    33721 gacggcgaca gcccggcccg gcgggcggcg gcataaagcg agctggtgat ctcgccgctg
    33781 gtgaccaccg tgcgcgtgga ggtctcgcgc ttggtcacct tctccttgat gtcatcgccg
    33841 gccaggctca actcgacccg gttgtcgcca tcacggtcga agcggatgct gcgcaggtcg
    33901 cccgagagcg gcatgtcgaa ggcgatttcg gtaccggggc gcagcttggt cagcgattcg
    33961 cgggcgccgg gatggtccag cacccggtgc agggtgctgg ccggaatgcc ggcctggtcg
    34021 aacaggtcgc tcagggtctg gccgcgctgc acccgcagca cctgccagct gtcgcccggc
    34081 acctgctgct ggcgggccat gctcaacggc ggcaacggca gtgccaggct ggtgtgggtg
    34141 tcggcgaacg gcgcgtcgat ggtgtgcgag aagccgggga cgatcgtcgc caccagcgca
    34201 ccgatggtcg caaacaggct ggcatgcatc caatggcgcc gggtccagcg ttcattgaat
    34261 gcggcgggaa ggtgttgcct gagcttccga tgcagggcgt tgtcgtgcag gacgtggagg
    34321 cgttcctgga agcgctgctt gcgtgcgcgc ccttgttcgg agttgtgcat cggcgatttt
    34381 tcctgacggc ccgggagcgc gggcctaaac gccggttacc atagacacct gagaaaaccg
    34441 cgtcaaaccc ttgtgcccat tggcttttgt gaagccaatc gggttaactt tgctttaaca
    34501 ccccacacaa gaatcggcgt tgccgggagt agtcacgtgt cctcgattga agaagccctt
    34561 gccctgatcg gccgtggtgc cgacgagatc ctcaagctcg aggatctgcg tgcgcgcctg
    34621 caggaaggcc gtccgctgcg gatcaaggct ggcttcgacc ccaccgcgcc cgacctgcac
    34681 ctgggccata cggtgctgct gaacaagatg cgccagttcc aggacctcgg ccaccaggtc
    34741 atcttcctga tcggcgactt caccgggatg atcggcgacc cgtcgggcaa gagcctgacc
    34801 cgcaagccgc tcagccgcga ggacgtgctg gccaacgccc gcacctatga ggagcaggtg
    34861 ttcaaggtgc tcgaccgcag ccgtaccgaa gtccgcttca attcggagtg gttcggcaag
    34921 atgggcgcgg ccgacatgat ccgcctggcc ggccagcaca ccgtggcgcg catgctcgag
    34981 cgcgacgact tcgccaagcg ctacgccgcc cagcagtcca tcgccatcca cgagttcctg
    35041 tacccgctgg tgcagggcta cgactcggtg gccctggagg ccgacgtcga actgggcggt
    35101 accgaccaga agttcaacct gctgatgggc cgcggcctgc aggagcacca tggccagaag
    35161 ccgcaggtgg tgctgaccat gccgctgctg gaaggcctgg acggcgtcaa caagatgtcc
    35221 aagtcgctgg gcaactacat cggtatcagc gaaccggcca tcgacatcgt caccaagacc
    35281 atgaaggtgg acgacaccct gatgtggcgc tggatcgagc tgctgtcgtt tgatatcagc
    35341 caggccgaag ccgtgcagct gcgcgagcag gtggcctccg gcgggctgaa tccgcgcgtg
    35401 gtcaagctgc gcctggcgcg tgagctggcg acccgcttcc acgacgctgc ggccgccgag
    35461 caggccattg ccggctggga agcggcggtg accgggcagg gcgacatcac ccagctgccg
    35521 ctgcaggacg tggtgatccc ggccgagggc ctgcgtatcg ccgcgctgct gacggcggcc
    35581 gggctgaccc cgagtaactc cgaagccaac cgcaagctca aggagcgcgc ggtcaaggtg
    35641 gacggtgacg tggtggagga cggccagcag gtgctgctgc cgggcttcga aggcctgctg
    35701 caggtcggca agcgcacctt cgcccgcgtg cgcctggtca ctgcctgaca ggaaggaagg
    35761 gccggcgcca gccggccctt cctttgcttc tgctcttcgc ggcatgcgtc cgcgggcgtg
    35821 atggatgaat ggatgcaaca tccgttgaaa aaaatcgcca cacccccttc acaaatgatc
    35881 cagatgggga catacttctc ctcccccgtc gcaggggtcg ccaccaaggg gcttcagcga
    35941 caacagggcg cccaccaccg ccgaacgaga tgatcgaacg aaggtgttga cggactgaaa
    36001 aagtctggca taatgggcgg ctcgctacga aggaaacttc ggagcacacg ggaacggcgc
    36061 tgaggccact tcccaagatc tttgaaagta tgcgcaggta tcttgtgaag gcgcctgcag
    36121 gaaggatgat tgtccatctt gcagacgttt gatcaagcaa ctattaattg ttttaaagca
    36181 agcgatacgt tgccagcatc aatcatctgc agctttaaat tttgatcttc ggatcatgt
//
LOCUS       DAOKIP010000018        35637 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.018,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000018 DAOKIP010000000
VERSION     DAOKIP010000018.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 35637)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 35637)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..35637
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.018"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            79..1515
                     /locus_tag="QEL58_000834"
     CDS             79..1515
                     /locus_tag="QEL58_000834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012480731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-lactamase family protein"
                     /protein_id="HDS1675347.1"
                     /translation="MYRTLAAALLCALFAAPIASARDVPGELPARLDAQLQANRERYG
                     IAGQAVLVAHNGNVLYQGASGERDPATHAPATVDTIFAAQSMAKLLTSTLVMQLVEQG
                     KVDLDAPASRYVPGLPSAWQAIPVRDYLNHSSGIAEYYDRVDNRWVSKGYSGVAPTLA
                     AALKVAAAAPMQFATGSRVQYTQANYLVLTALLEAHYRKPYPAIARERILLPLKMTHT
                     SWGVASVPAQHAAVPYIGKDGTLQPANEDPWPDYGWGHADLQTTVGDMNRFLQALATG
                     KLVRTATLEKLWQPQKLSGGGSNFFSTGWDTTRSDGYTQVGHDGGTRVRVRLAYKDTL
                     ASGYWVFVYLTNGSARNVWSSTLVESTMAVAAPVEFPHAVLSERLIAYALDDDAGAAQ
                     AMRAWLRDDTRITGNERERAINASGYAIRGSLGARKALKVFTLNTELYPDSANTWDSL
                     AECHVALGEKETSDRLYAKAQALAKPSP"
     gene            1712..3820
                     /locus_tag="QEL58_000835"
     CDS             1712..3820
                     /locus_tag="QEL58_000835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDS1675348.1"
                     /translation="MSLSSYRPTPSPLFLAVSLGLATTAHAAPQATTLDAVQVTAADA
                     SAQAREALKRVPGASNVIDVAKADSRLSSSADVLAYQPGISAQSPGNEGTKVSIRGSG
                     INRGPGAHASGIAVSIDGLPLTGPGGTPYELLEPLWLSRVEVLRGANGFERGALALGG
                     AIDYVSRSGRDSAGVQLHYEAGSRGYQKRGISWGGVSGDVDYFLAYTDTEFDGYQYHA
                     RGDGKGAMANIGWQITPDLQTRFFVRYRETNHETPGRLTRDQIRNDPRAANPANLAID
                     ARRPQPGSTWVGNVTTLQIDEDSSLQAGLVYHKYPMDLNESLYRQQLDYANLNATLDY
                     RHRHRLFGLDSETTVGLRVTHDLDADVRESLRFANNGYAAGTRTRDFRHHGTDSTLHV
                     SNTLTLNERLRLQTGLALINTRRDVQVTWPNSGGRLRDHDWDYAPRLGFTWQHSAQTQ
                     WFGNLSRSVEAPHPWSMIWGSNQYFGPGNGPSTGRQRAPVPMQNQTATTLELGARGDA
                     VLGRWELTGYYAHVNHELLSVELQPVPNLFIAENNASPTVHRGIEAGLDSTLWQAAPG
                     RLSLRQAYTFSDFRYRHDARFGSNRLPGLPRHSYQAELRFDHASGLYAALNTEYASRI
                     AVDYANSYWADSHVIFGSRIGYDAPNGRWQAWAEMRNIGNRHYAATVTPGYDDAGKDV
                     ARSTPGEGRGIYAGVRWRFD"
     gene            complement(4002..4385)
                     /locus_tag="QEL58_000836"
     CDS             complement(4002..4385)
                     /locus_tag="QEL58_000836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012480737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HDS1675349.1"
                     /translation="MDESHCRHLIEHYLQAYNRFDIDAMLAVLAHNVRFENHSGDQLT
                     MVTEGIDAFAELARQSAQMFREREQQLLGLTFEDDVALASIGWRGVFAQDIPGGPRTG
                     AELALKGRSEFAFEGGRIVRIVDRS"
     gene            complement(4438..5013)
                     /locus_tag="QEL58_000837"
     CDS             complement(4438..5013)
                     /locus_tag="QEL58_000837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005413883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HDS1675350.1"
                     /translation="MSPRPSDAPQRVIDAAAQMLARVGLNATSIREVTKLAEAPLGST
                     YHHFPGGKQELLARATHMAGDKVEALLVELLKGGAAQGLQQFLAMWRERLLRSGFRAG
                     CPVLAAAVEEPVEAMHSQPRAAAAEVFARWQGHLASAFVAEGHDPAAAAGLASLVIAS
                     VEGAVAMCRALQGIAPFDQVAAQLLKAVATP"
     gene            5083..5628
                     /locus_tag="QEL58_000838"
     CDS             5083..5628
                     /locus_tag="QEL58_000838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005417333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HDS1675351.1"
                     /translation="MNLWFRLLHLLLCSLFRPKLDAPFGVSRLQFRVLPNDLDSNLHM
                     TNGRYWNIFDLGRLDLILRMGLGRVALREKWAPIVGAGTIQFRRELKPFQRFTLETRL
                     VGWVGSRGIMEQRVLIGAEQKIATRALLVTGIYDRRARQFLSMPKMMEAIGVVAPPSP
                     PLSAAAEALLAADAALKQDDA"
     gene            complement(5635..6768)
                     /locus_tag="QEL58_000839"
     CDS             complement(5635..6768)
                     /locus_tag="QEL58_000839"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008264527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="agmatine deiminase family protein"
                     /protein_id="HDS1675352.1"
                     /translation="MSNRRHFLTQLAGAAGLGGLAALGLAGLPGRVAAAGPGAGIWRM
                     PDEHGPQERVFMAFAAQPRVWGAQADAVNTAVARLARTIARHQPVSVLCRPAQLKQAQ
                     DRCGRDNIEFLEVPLDDIWVRDYGGCFVTNGRGGLGLVDFNFNGWGGKQSARNDGAVA
                     PWLAQVTGATLLESDLVGEGGGIEVDGHGTAILTESCWVNRNRNPGWSRADIEAELKH
                     HIGLRKIIWLPGIAGEDITDAHVDFYARFVRPGVVIANLDNDPDSYDYDLTREHLQIL
                     RGASDADGRRLQVHTLPPPLDGRDNVHTRDNDDLAMGYINYLPINGAVVAPQFGDDAA
                     DGYCRELLEELYPGRVIEQVDIDAIAGGGGGIHCVTKNMPKVE"
     gene            6874..7743
                     /locus_tag="QEL58_000840"
     CDS             6874..7743
                     /locus_tag="QEL58_000840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDS1675353.1"
                     /translation="MLKHWPPLNALRGFEAAARLGSFHRAAEELHLSQSAISQQIRGL
                     EDALQQPLFFRQGRSVTLTDAGLDLLETTQSLLRQLASGIRRLDQYRKPNQLIVNTSP
                     AFARHWLVPRLAEFHRLNPGADLWLLTSEEAPDMTTQTLDVAVRDDLDSQAQCQHRVL
                     LQDRLYPACHPALLATPVQQRLTLHGEREMDWSQWQVQGGADVGQRREGMNFSEPGQL
                     LDAACQGLGIALVSELLAARACEQGLLQPLDDARVRGPRWSWLVHEDSAADPLVISFG
                     EWLLASLPDPARA"
     gene            complement(7691..8500)
                     /locus_tag="QEL58_000841"
     CDS             complement(7691..8500)
                     /locus_tag="QEL58_000841"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012480740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SGNH/GDSL hydrolase family protein"
                     /protein_id="HDS1675354.1"
                     /translation="MRGSVLLAGAITVVMALSTPLEAAEQAAVNPLLVKPVERLRPDE
                     VRFMQQQLADWPQLQRYRDANSQLPAAVPGQPRVVFFGDSITEGWGREGSASFFPGRG
                     WLNRGISGQTTAQMLLRFPQDVLALKPQVVVILAGTNDIAGNTGPSTQAMIEDNLHAM
                     VDLARVHGVRVVLASVLPVSEYPWMPGITPAPKVRALNTALKRYAEAKQLIYLDYYAP
                     MANAAGGLDPQLADDGVHPTAKGYEVMAPLAEAAIKRALDQADSPATTHRN"
     gene            complement(8550..9515)
                     /locus_tag="QEL58_000842"
     CDS             complement(8550..9515)
                     /locus_tag="QEL58_000842"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic murein transglycosylase"
                     /protein_id="HDS1675355.1"
                     /translation="MFMILRGLLALACTGAVGMAMAAEPAAPQILTEDVTRFYALYDT
                     AGGKPSVAQLRGYMAEGSVGLAELAKARRVTPERIAEAMVAQPELYAQGRNCLAELPM
                     VKQRLTHVFANLRAIYPQTRFPPVTIAVGRGRPVGLTSKSGVIIGLEALCAADFMNPN
                     VQDRFVHVIAHEYVHIQQTGPTDFEPGDPHATVLRVSLGEGIAEFITELISGNVGNGR
                     HAAWTRGREVHIESAFALDLDSTDLSPWLYNYTPGSQEPYDLGYWVGYRIAKAYYLQA
                     RDKRDAVRALIQQDNPKTILAASGWTPGMWMPAKVTGVAAGAVAR"
     gene            9654..10637
                     /locus_tag="QEL58_000843"
     CDS             9654..10637
                     /locus_tag="QEL58_000843"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675356.1"
                     /translation="MMIVPAYWAEARLQARFRGRPVVVRRFGWSDEGPAEAQGHADRR
                     ANEALNAILAGQALPRREVRSNYGVEGVPIREQIVRRDGDVIITRNSYGALCLNTPDV
                     LFADIDHAPPPAGCVMPALIAAVLLFAGAIIGTLLWHWLVGLVLGVAAVVLVNTALLM
                     QRRRRLAAAGGAEGVALQRVAAFSEQHPDWHLRAYRTPAGLRVLAMHATFPPEDEQLQ
                     AFFKALGADTLYARMCRLQHCFRARLTPKPWRVGLKHRIRPPVAAWSAEQANNPDRLA
                     WIAEYEKKSSGFAACAYLRSFGDTTRTHAKAEHVRDLHDRLSHALDRLPLA"
     gene            complement(10651..10971)
                     /locus_tag="QEL58_000844"
     CDS             complement(10651..10971)
                     /locus_tag="QEL58_000844"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675357.1"
                     /translation="MKVVVLAALLMVAQAPAIHAQALPAELAQLGIIAGMPYAKAKRL
                     LDAAGWQAQPMQGAPESLEGFPEVGCQKGGKECVTTFEKGDQQVAVRLGTTLAGQPFV
                     QGAD"
     gene            complement(11189..12484)
                     /locus_tag="QEL58_000845"
                     /pseudo
     CDS             complement(11189..12484)
                     /locus_tag="QEL58_000845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001142368.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(12824..13243)
                     /locus_tag="QEL58_000846"
                     /pseudo
     CDS             complement(12824..13243)
                     /locus_tag="QEL58_000846"
                     /inference="COORDINATES: protein motif:HMM:NF012573.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(13445..13768)
                     /locus_tag="QEL58_000847"
                     /pseudo
     CDS             complement(13445..13768)
                     /locus_tag="QEL58_000847"
                     /inference="COORDINATES: protein motif:HMM:NF012573.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(13931..14266)
                     /locus_tag="QEL58_000848"
                     /pseudo
     CDS             complement(13931..14266)
                     /locus_tag="QEL58_000848"
                     /inference="COORDINATES: protein motif:HMM:NF012573.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="putative Ig domain-containing protein"
     gene            complement(14783..15742)
                     /locus_tag="QEL58_000849"
                     /pseudo
     CDS             complement(14783..15742)
                     /locus_tag="QEL58_000849"
                     /inference="COORDINATES: protein motif:HMM:NF012573.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="calcium-binding protein"
     gene            complement(15845..16132)
                     /locus_tag="QEL58_000850"
                     /pseudo
     CDS             complement(15845..16132)
                     /locus_tag="QEL58_000850"
                     /inference="COORDINATES: protein motif:HMM:NF012573.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(16214..16396)
                     /locus_tag="QEL58_000851"
                     /pseudo
     CDS             complement(16214..16396)
                     /locus_tag="QEL58_000851"
                     /inference="COORDINATES: protein motif:HMM:NF012573.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(16835..17488)
                     /locus_tag="QEL58_000852"
                     /pseudo
     CDS             complement(16835..17488)
                     /locus_tag="QEL58_000852"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003082542.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="calcium-binding protein"
     gene            complement(17495..18421)
                     /locus_tag="QEL58_000853"
                     /pseudo
     CDS             complement(17495..18421)
                     /locus_tag="QEL58_000853"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005578814.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(18908..19831)
                     /locus_tag="QEL58_000854"
                     /pseudo
     CDS             complement(18908..19831)
                     /locus_tag="QEL58_000854"
                     /inference="COORDINATES: protein motif:HMM:NF012573.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(19824..20633)
                     /locus_tag="QEL58_000855"
     CDS             complement(19824..20633)
                     /locus_tag="QEL58_000855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675358.1"
                     /translation="MAGRWLASVCRLRFGLLLCLSMSAMLVGCGSDRKEPEAARLQGR
                     IGGVALEVPREDVWIWEQDRDARADPSSSCGAPLRSVSIQLRWPEMVPRNAQTREDYD
                     RHHSAGNGDSNWIDIGLNQAGEGENITLRQIRDWGLYRLHHQRLPAEVTFEFGRDAAL
                     GLEMARPALPESRSFNWNRVTYTDSLDPARAPTVLIRCMTGPQYAPPQWTPLCEASLE
                     QPGLLNVRTTVVYRQNLLPHWRKIESDVQAYLKRIRSHCPTHRNVKEIEHG"
     gene            complement(20647..22068)
                     /locus_tag="QEL58_000856"
     CDS             complement(20647..22068)
                     /locus_tag="QEL58_000856"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005920693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family type I secretion periplasmic adaptor
                     subunit"
                     /protein_id="HDS1675359.1"
                     /translation="MKHRLQAAGDFLRRYGRVAGAAWKARAQMEAPQRTADERDFLPA
                     HLELIETPISPTSRWSMRIIIALFCVALLWACIGQLDIVAVAPGKTVVNSRTKVVQPA
                     ETAVVRRILVRDGQAVKAGELLIELEGAGTGAELAQADEALTNARLAALRLDALLVAF
                     DTGNVPQLPLDSRLPAQRLADEQVLVRSQFDAFQARRNGLQAGIQQRQAELHTTEGLI
                     QPLSDSAQIARTRAADYARLVEGNYVGRHDYLLREQERIAAERDLATQRNRVQELRSA
                     LLAAREELRVLVTDTRQQALDELRKAQEQIGQMGPEVAKTGQRNRQMTLRAPVDGTVQ
                     QLTVHTVGGVVTPAQPLLVVVPSGDGMEVEATLLNKDIGFVRPGQAVTIKIDSFPYTR
                     YGYLTGTVVSVSHDAAQDEQLGLVFPARIRLDRSELDIGGVKVRMSAGMSLSAEIKTG
                     RRRVIDYLLSPLQQHAQESLRER"
     gene            complement(22065..24227)
                     /locus_tag="QEL58_000857"
     CDS             complement(22065..24227)
                     /locus_tag="QEL58_000857"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014607380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I secretion system permease/ATPase"
                     /protein_id="HDS1675360.1"
                     /translation="MHQGTVASQGVARERVVHAQPDLALRGLVLLAQFHGIAADAEQL
                     AHAHGRNGEAFDETTLLLAARRLGLKARISATPQRRLSRVTLPALALAGAHPFIIARI
                     DADQVLIHDLAEKRPRTLTLDELGQRYAGRLLQVTSRASVLGELARFDFSWFIPAVIK
                     YRRLLVEVLIVSFFIQMFALVTPLFYQVVMDKVLVHRGLTTLDVIAIGLVSMAVFDVV
                     LSGLRTYVFSHTSSKIDVELGARLFRHVLALPLAYFESRRVGDTIARVRELENIRSFL
                     TGQALTSVLDLFFTVVFLAVMFHYSGWLTLIVALSLPVYALISALVTPVLRRRLNDKF
                     QRGADNQAFLVETVSGIGTVKAMAVDPRVTRTWDSQLAGYVSAGFNVTRIATLGQQSV
                     QLVQKLVAVAILFWGAKLVIEGKLSLGQLIAFNMLSGQVAAPIIRLAQLWQDFQQVGI
                     SVERLGDILNTRTELPGSRMALPPIQGRITFERVGFRYRPDAAAVLADIELDVRPGEV
                     VGIVGRSGSGKSTLTKLVQRLYSPEQGRVLIDGHDLALADPAWLRRQLGVVLQENFLF
                     NRSVRENIALGEPGMPLERVIQAATLAGAHEFIIELPEGYDTKVGEHGTGLSGGQRQR
                     IAIARALITDPRILIFDEATSALDYESEHAVMSNMRAICKGRTVLIIAHRLSTVRHAN
                     RIVVVEKGRIVEVGAHEELMRRPEGFYVRLHRLQAGAA"
     gene            complement(24395..26857)
                     /locus_tag="QEL58_000858"
     CDS             complement(24395..26857)
                     /locus_tag="QEL58_000858"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006376318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S9 family peptidase"
                     /protein_id="HDS1675361.1"
                     /translation="MLIRRTSLAAAIAVATVGLLAAGPALADYAKPPEHLLKVLKAPP
                     PPAPNVAPGGQRLLLTTAQTYPSISRVAQPYLKLAGVRLEPKNRSRHDTPGGYGIPAC
                     VADFTLVDIGSGKETKVNLPQGCATGALWSADGSHFAFQNAVDTSVQLWVGDAATGQV
                     KQVPNVQLNPIFGNTVQWLGGSQNLLVKLVPANQGPAPSNGGVPTGPDAQESLGSSGE
                     SSTYEARDTLTSVHDEKLFAYYGASQLAVVDAAAGSVRPVGQPALFNEVSAAPDGVHV
                     LTESIKAPYSHAVTYQRFANDVAVLDIASGKTTAIASLPLADRVPVHGVPEGPRGFDW
                     RATDPATLVYAEALDKGDWKVNVPHRDRVLMLKAPFNGKPTEITRTAQRFEGFAWTAD
                     PAVAFQYENDENRHWMQTRIVDVDQPKKEGRLLWDMSSDELYGNPGNLVFTRLPNGAP
                     VVRREGNHVFLSGRGASPQGDRPFLDRLDLGTLKSERLFRSSADAYEQFLGFSATPGR
                     YLTWHQSVIDPPNAFIRQQGEAVADAKAGEAQFASSATALTRLVDPTPEVRQIKKQLV
                     TYKRADGVDLSFTLYTPPGYKEGQRVPAILYAYPADFANAAQAGQVSGSQQTFTRLQP
                     YRLMLLAGYAIIDNASFPIVGDPKNAYDTYLEQLEADAKAAVDKAVDMGVVDRNRIGV
                     TGHSHGGLMTANLIAHTNLFKAGVATSGSYNKTFTPFGFQNERRSVWQAQDVYLKASP
                     FFYADKIKLPLLLVHGEDDANPGTEPFQSRKLYQAIRGNGGTTRLVMLPNEPHWYTAL
                     ESNEQLVSEMLNWFDTYVKNAK"
     gene            complement(27025..27354)
                     /locus_tag="QEL58_000859"
     CDS             complement(27025..27354)
                     /locus_tag="QEL58_000859"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675362.1"
                     /translation="MSDEFNPMLPPLDDAKVEEMIGKLVLVGVTRYGGDGQVQGLEQY
                     AGTVLRISADEGVVLADENDGHERYLPPMLDQYLPAEPGEYRMRNSGMIVVDPDYLAT
                     WDLHAQQ"
     gene            27885..28661
                     /locus_tag="QEL58_000860"
     CDS             27885..28661
                     /locus_tag="QEL58_000860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I and II"
                     /protein_id="HDS1675363.1"
                     /translation="MRTVHALRYITPLREGGSLPAVVETDDDGMAVLKFRGAGQGPKA
                     LIAELIAGEMARTLGLPIPEILFVELDREFARTEPDPEIQELIRASEGLNLGLDYLPG
                     AINYDPAAMPVDADLASRIVWFDAFTSNVDRTTRNPNLMVWHRKLYLIDHGAAMYFHH
                     DWANAGDACEKPFVLIRDHVLLSFASRIAEVDAELAARLTDAEIERIVGLVPDSWLVN
                     EPAFDSPQAYRQGYIDYLKHRLKVRAVFVQEAIRAHAAHV"
     gene            28639..29031
                     /locus_tag="QEL58_000861"
     CDS             28639..29031
                     /locus_tag="QEL58_000861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019337307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3037 domain-containing protein"
                     /protein_id="HDS1675364.1"
                     /translation="MPTLHTYDYAVIRVVPRVEREEFINVGVIVSCPGARHLEAAIEI
                     DPARLHAFAPALDQEALQPWLDAIVAICRGDASAGPIAQLPARARFHFLTAKRSSIVQ
                     MSSTHVGRTADPAGVVEHLMTKMVRVPR"
     gene            complement(29044..29268)
                     /locus_tag="QEL58_000862"
     CDS             complement(29044..29268)
                     /locus_tag="QEL58_000862"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675365.1"
                     /translation="MSRFLPVVCLVASMVLLLRGMQVILKGVAVMANEGASAAYAQGY
                     LHGQAVAGWMLIAAAAACALIAWQRVRAKK"
     gene            complement(29331..30761)
                     /locus_tag="QEL58_000863"
     CDS             complement(29331..30761)
                     /locus_tag="QEL58_000863"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012480747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-lactamase family protein"
                     /protein_id="HDS1675366.1"
                     /translation="MRAFGRLFLCNALACVVLVTASASPVVGASSFEHAHPRAQNAID
                     DWLAAFNAGSLEGLQAFADRYAKQEGSTPKDYLDFRESTGPLSVLETLESASSQAKLL
                     VMGQLNERAMRVTAVMDPANPAHVKQFQIEGAETPDKYKPARVALPVLMADAAAKLEA
                     LRARDALSGALQVVQNGKVLLDWRGGDSDRTAGIPVGVDTQFRLASSNKMFTAVAILQ
                     LVQDGKLSLDDTIGKHLPDYPNKAVANNVTVRHLLSHTSGLGDFFGDDFEQYSASLKT
                     LDDYVQRFAKDAPQFAPGSQDSYSNYGFIVLGRIIEAVSGQSYYVYVQDHILRPAGMT
                     GTGFEPETVSVPQRAVAYTKKDGQWLRETKSLPWRGMSAGGGYSTVSDMVAFAEALRS
                     GKLVSPVLLQQATTAQNHKGWYGFGFVVQGEGREHQYGHEGGAPGSNSAIVVLPAQGC
                     VIVGLANVDPDAIGNVVNYIARRVPL"
     gene            complement(30990..31895)
                     /locus_tag="QEL58_000864"
     CDS             complement(30990..31895)
                     /locus_tag="QEL58_000864"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005413897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDS1675367.1"
                     /translation="MDLIAPLRTFAKVAEVGSFAAAAEVLDLSPQVVGKHVQALEQHL
                     GVRLLNRTTRKQSLTDFGQAYLARARVILEEVEGAEQLAEVARGRPMGRLRISAPVTF
                     GVHALGPALVAYMQAYPDVQVDLNLSNSLVNIVEDGYDLVFRTGDLADSGLVARRLGP
                     YPLVLCASPDYLASRPAITHPNDLSRHECLGFAHSIIRTRWSFRDAEGSVLTVPVSSR
                     FMVNQAEPLLTAAVGGLGLILQPYEMLSATLARGDLVEVLPTFEPVSTWIHLLYPRDR
                     QVTPKLRSFVDFCVARFSEQSMARR"
     gene            32018..33007
                     /locus_tag="QEL58_000865"
     CDS             32018..33007
                     /locus_tag="QEL58_000865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-dependent alcohol dehydrogenase family
                     protein"
                     /protein_id="HDS1675368.1"
                     /translation="MSQVVRIHEYGNADVLRIDDIDVAAPAADEVQIRVKAIGLNRAE
                     VMFRNGAYLQEAQFPSRLGYEAAGVVEAIGSAVSGFAAGDAVSVIPPLDIARWGTYGE
                     LANVPARLVVKHPQTLDFETAAAVWMQYVTAWGALLEQAQLTAGDFVIITAASSSVGL
                     AAIQIANAVGATPIAVTRGPGKRQALLDAGAAHVIATEEQDLVAEVARITNGAGARVV
                     FDPIGGPQFVPLTEAMARGGILLEYGALSSEPTPFPLFNVLGKSLTLKGYLYSEIVSD
                     DAALARAKAFIVNGLDKGTLAPKIARVFPFAQIQDAHRYLESNEQIGKVVVTV"
     gene            complement(33015..35567)
                     /locus_tag="QEL58_000866"
     CDS             complement(33015..35567)
                     /locus_tag="QEL58_000866"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014647650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane-bound PQQ-dependent dehydrogenase,
                     glucose/quinate/shikimate family"
                     /protein_id="HDS1675369.1"
                     /translation="MSATPQSASAPSSRHPLVTVLSLLLVVLGLVIGGLGAWLLSLGG
                     SAYYAIAGFGLLASGILLFGNRRSGALLYALVFLGTLLWTWWESGSDYWRWVPRLGLV
                     TALGIVLALLAPTLHQPVSRRLSRSVAGVLMLVFVAAFGLAFAPHGEVDGHQPFPEGA
                     ASAGLEPTRDTTGLQPADQPADGDWPAWGRSNAATRYSPLQQITPANVGTLQLAWQFR
                     TGDLPKKRWGAETTPLKIGDRLYLCTARNRLIALDAASGKELWRFDPKVKDASIPYTA
                     ACRGVSYYEQPSAPTLADAALADVAADLALPEPPPSVTRSAAPGSHPACWARIIEGTL
                     DGRLIAVDAGSGRPCANFGNNGQVDITLGMGEVPPGYVSITSPPAIVRGVIVTGHQVL
                     DGQRRDAPSGVIQAYDAITGKLRWAWDMDQPERSGLPPREQTYTRGTPNMWTTATGDE
                     ALGLVYLPLGNSAGDYWSGSRTENQNRYATSLVAIDVATGKPAWHFQAVRKDVWDYDL
                     GSQASLIDYPTAAGKVPAILLPTKQGDIYILDRRNGQLLSAAEERKVPIGGVEPEQRS
                     PTQLFSLYHTLRREHELTERDMWGLTPIDQLVCRIQFRKAYYEGFYTPPSSDRHSIEY
                     PGYNGGSDWGSVSIDTRRGVVVANYNDMPNYNRLVPRAEADRLGWLPREKIRFDKGGA
                     EGAGDPQVGTPYAIQVNAGWRLPFTGLLCKQPPYGGIRAIDLRTGKLLWDRPFGSARG
                     NGPFGIRSGLPIEIGTPNNGGSVVTASGLIFIAAATDDLLRAIDLKSGKELWHTTLPA
                     GGQANPMVYEQDGRQYVVIVAGGHHFMETPKGDYVMAYALPEPGRPVAARAP"
BASE COUNT         6111 a        12281 c        11038 g         6207 t
ORIGIN      
        1 ctggtgcggg aatcggtgcc cttgacccgc tctcccgccg tgaccaacat gcaccatcac
       61 cgctgacgga tcaccgcgat gtaccgcacc cttgctgctg cattgctctg cgctctcttt
      121 gccgctccca tcgcttccgc gcgtgacgtc cccggcgagc tccctgcccg gctcgacgcc
      181 caactgcagg ccaaccgcga gcgctacggt attgccggcc aggcagtgct ggtcgcgcac
      241 aacgggaacg tgctctacca gggcgccagc ggtgagcgcg acccggccac gcatgcgcct
      301 gccactgtcg ataccatctt cgccgcgcag tcgatggcca aactgctgac cagcacgctg
      361 gtgatgcagc tggtggaaca aggcaaggtg gacctggatg cacccgccag ccgctatgtt
      421 ccgggcctgc catcggcatg gcaggcgatc cccgtgcgcg attatctcaa ccacagttcc
      481 ggcattgccg agtactacga ccgcgtggac aaccgctggg tcagcaaggg ctacagcggc
      541 gtggcaccca cccttgccgc cgctctgaag gtggcggctg ctgctccgat gcagtttgct
      601 accggcagcc gcgtgcagta cacccaggcc aactacctgg tgctgacggc cctgctggaa
      661 gcgcactacc gcaagcccta ccccgccatc gcgcgcgaac gcatcctgct gccgctgaag
      721 atgacccaca cctcctgggg cgtggcgagc gtgcccgcgc agcacgcagc ggtgccgtac
      781 atcggcaagg acggcacatt gcagcccgcc aacgaagatc cgtggccgga ctacggttgg
      841 ggccatgccg atctgcagac taccgtgggc gacatgaacc gctttctgca ggcgctggcg
      901 accggaaagc tggtacgcac ggcgacgctg gaaaaactat ggcagccgca gaaactgagc
      961 ggcggtggca gcaacttttt ctccactggt tgggacacca cgcgcagcga cggctacacc
     1021 caggtcggcc acgatggcgg cacccgcgtg cgggtgcggc tggcctacaa ggacacgctg
     1081 gccagtggct actgggtgtt cgtgtacctg accaatggca gcgcgcgcaa tgtgtggtcg
     1141 agcacgttgg tggagagcac gatggcggtg gccgcacctg tcgagtttcc gcatgcggtg
     1201 ctgtcggagc gactgatcgc ctatgcactg gatgatgatg ccggcgccgc gcaggcgatg
     1261 cgggcctggt tgcgcgacga cacccggatt acgggcaacg aacgggagcg tgcgatcaat
     1321 gcgagcggct atgccatccg cgggagtctg ggcgcgcgca aggcgctgaa ggtgttcacc
     1381 ctcaataccg agctgtatcc ggattcggcc aatacctggg acagcttggc cgagtgccat
     1441 gtggcgctgg gtgagaagga aacgtctgat cggctgtacg caaaggctca ggcgctggcg
     1501 aagccttcac cgtaaaccga ttgtagagtc gagcttgctc gactgcttct ctgcgtcgga
     1561 gtcgagcacg gctcgactcc acaagtgcga aagagcagtc gagcaagctc gactctacaa
     1621 gtgcgcgggc ggccatacgc cgccgatggg tgacgcggcg cgcgcgacct gttaacttgc
     1681 gcgccacttt cgtggtttac agcagtcccg catgtcgctc tcgtcgtacc gccccactcc
     1741 gtcgccactg ttcctggccg tttctctcgg cctcgccact accgcccacg ccgcgccgca
     1801 ggccaccacg ctggatgcgg tgcaggtcac cgccgccgat gccagcgctc aggcacgcga
     1861 ggcgttgaag cgcgtgcccg gcgccagcaa cgtcatcgac gtggccaagg ccgacagccg
     1921 actgtccagc agcgccgatg tgctggctta ccagcccggc atcagcgcac agtcgccagg
     1981 caacgagggc accaaggtct ccatccgcgg ctccggcatc aatcgcgggc cgggcgcgca
     2041 tgcctcgggc atcgccgtgt cgatcgacgg cctgccgttg accggaccgg gcggcacgcc
     2101 ctacgagctg ctggaaccgc tgtggctgtc gcgcgtggaa gtgctgcgcg gggccaacgg
     2161 tttcgagcgt ggcgcgctgg cactcggcgg tgccatcgac tacgtcagcc gcagcggccg
     2221 tgattcggcg ggcgtgcaac tgcattacga agccggcagc cgtggctacc agaagcgtgg
     2281 catcagctgg gggggtgtca gtggcgatgt cgactacttc ctggcctaca ccgataccga
     2341 attcgacggt taccagtacc atgcccgtgg cgacggcaag ggcgcgatgg ccaacatcgg
     2401 ctggcagatc acgcccgacc tgcagacccg cttcttcgtt cgctaccgcg aaaccaacca
     2461 cgaaacgccc gggcgcctga cccgcgacca gatccgcaac gacccgcgtg cggcgaaccc
     2521 ggccaacctg gccattgatg cgcgccgccc gcagccgggc agcacgtggg tgggcaatgt
     2581 caccacgctg cagatcgatg aggattcctc gctgcaggcc gggctggtct atcacaagta
     2641 cccgatggac ttgaacgaga gcctgtaccg ccagcagctg gactacgcca acctcaatgc
     2701 cacgctggac tatcgccatc gccaccggct gttcggcctg gacagcgaaa ccaccgtagg
     2761 cctgcgcgtc acccacgacc tggacgccga cgtgcgcgag tcgctgcgct ttgccaacaa
     2821 tggctatgcc gctggcacgc gcacgcgtga cttccgccac cacggcaccg acagcacgct
     2881 gcacgtcagc aacaccctca cgttgaacga gcgcctgcgc ctgcagaccg gactggcgct
     2941 gatcaacacc cgccgtgatg tgcaggtgac ctggccgaac agtggcggcc gcctgcgcga
     3001 ccacgactgg gactatgcgc ctcgactggg cttcacctgg cagcacagcg cgcagacgca
     3061 gtggttcggc aacctcagcc gttcggtgga agcaccgcac ccgtggtcga tgatctgggg
     3121 ctcgaaccag tacttcgggc caggcaatgg accgtccacc ggccgccagc gcgcgccggt
     3181 gccgatgcag aaccagaccg ccaccacgct ggaactgggc gcacgtggcg acgctgtgct
     3241 gggccgctgg gaactgaccg gctactacgc acacgtgaac cacgaactgc tgagcgtgga
     3301 gctgcagccg gtgccaaacc tgttcatcgc cgagaacaac gccagcccga ccgtgcaccg
     3361 tggcatcgag gccggcttgg acagcacgct gtggcaggcc gcgccggggc gcctgtcatt
     3421 gcgccaggcg tataccttca gcgatttccg gtaccgacac gatgcgcgct tcggcagcaa
     3481 ccgcctgccg ggcctgccgc gccacagcta ccaggccgag ctgcgcttcg accacgcctc
     3541 cggcctgtac gccgcgctca ataccgagta cgcctcgcgt atcgcggtgg actacgccaa
     3601 cagctactgg gccgacagcc atgtgatctt cggcagccgc atcggttacg acgcacccaa
     3661 tggccgctgg caggcgtggg cggagatgcg caacatcggc aaccgccact acgccgccac
     3721 ggtcacgccg ggctatgacg atgccggcaa ggatgtagca cgctctacgc cgggcgaagg
     3781 ccgcggcatc tatgcgggtg tgcgctggcg ctttgattga gccacattcc ggccgggcca
     3841 ctctccatag caaagaacag cagcagcccg ggtccgccgg gccagcgcca ccgggtgccg
     3901 cggatcgtgc agcatggacg cttgagaacc tgatgcagca tgctggcatc cttgccgggc
     3961 acgcgtaggc ggtgttgccc ggattccacc gcagccgctc ctcagctgcg gtcgacgatc
     4021 cgcacgatgc gaccgccctc gaaagcgaac tcgctgcgcc ccttcagtgc cagttccgcg
     4081 cctgtgcggg ggccgccggg aatgtcctgc gcgaacacgc cacgccagcc aatgctggcc
     4141 agcgccacgt catcctcgaa ggtcagccca agcaactgct gctcccgctc gcggaacatc
     4201 tgcgccgatt gccgtgccag ctcagcaaag gcatcgatgc cttcggtgac catggtcagc
     4261 tggtcgccgc tatggttttc gaagcgcacg ttgtgcgcca gcactgccag catggcgtcg
     4321 atgtcgaagc ggttgtaggc ctgcaggtag tgctcgatca ggtggcggca atgcgattcg
     4381 tccatggcga cgtccagtca gggccagcac cgagtctccc gcgaccgtgt ggccggatca
     4441 aggcgtcgcc acggctttca gcaactgcgc ggccacctga tcgaacgggg cgatgccctg
     4501 cagggcacgg cacatcgcca ccgcgccttc cacgctggcg atcaccaggc tggccagacc
     4561 ggccgcagcg gctggatcgt gaccttcagc gacgaaggcg gaggccagat ggccctgcca
     4621 gcgcgcgaac acctccgcgg cggccgcgcg gggctggctg tgcatcgcct ccactggctc
     4681 ctccaccgca gcggccagca ccgggcaccc cgcacggaag ccggagcgca gcagccgctc
     4741 gcgccacatc gccaggaact gctgcaggcc ctgcgccgcg ccgcccttca gcagctccac
     4801 cagcagtgct tccaccttgt cgccggccat gtgagtggca cgcgccagca gctcctgctt
     4861 gccgccggga aaatggtgat aagtggaacc cagcggcgct tcggccagct tggtcacctc
     4921 gcggatgctg gtggcattga ggcccacgcg cgccagcatc tgtgccgcgg catcaatcac
     4981 gcgttgaggc gcatcagagg gtcgcgggct cacggcaggc tccttgctaa gacagtcgtc
     5041 atagattagc gtaccggccg ttctataaca gtcgtcatag ccatgaatct ctggttccgc
     5101 ctgctccacc tcctgctgtg cagcctgttc cggccgaagc tggacgcccc gttcggggtc
     5161 tcgcggctgc agttccgggt gctgcccaac gacctggaca gcaacctgca catgaccaat
     5221 ggccgctact ggaacatctt cgacctgggc cggctggacc tgatcctgcg catgggcctg
     5281 ggccgggtgg cactgcgcga gaaatgggcg ccgatcgtcg gcgccggcac catccagttc
     5341 cgccgcgagc tgaagccgtt ccagcgcttc accctggaaa cccggctggt cggctgggtg
     5401 ggctcgcgcg gcatcatgga gcagcgtgtg ctgatcggcg ccgaacagaa gatcgccacc
     5461 cgcgcgctgc tggtcaccgg tatctacgac cgccgcgcgc gccagttcct cagcatgccg
     5521 aagatgatgg aagcgatcgg tgtggtggcc ccgccgtcgc cgccactgag tgcggccgcc
     5581 gaggcgctgc tggcggccga tgccgcgttg aagcaggacg acgcctgagg cccctcactc
     5641 caccttcggc atgttcttgg tcacgcaatg gatgccgccg ccgccaccgg caatcgcatc
     5701 gatgtccacc tgttcgatca cgcggcccgg atacagctct tccagcagct cacggcagta
     5761 gccgtcggcg gcgtcatcac cgaactgcgg cgcgaccacc gcgccattga tcggcaggta
     5821 gttgatgtag cccatcgcca gatcgtcgtt gtcgcgggta tgcacgttgt cgcgcccgtc
     5881 cagcggcggc ggcagcgtat gcacctgcag gcggcggcca tcggcatcgc tggccccgcg
     5941 caggatctgc aggtgctcgc gggtcaggtc gtaatcatag gagtccggat cgttgtcgag
     6001 gttggcgatc accacacccg gacgcacgaa gcgcgcgtag aagtccacgt gtgcatcggt
     6061 gatgtcctcg ccagcgatgc cgggcagcca gatgatcttg cgcaggccga tgtggtgctt
     6121 cagctcggct tcgatgtccg cgcgcgacca gcctgggttg cggttgcggt tcacccagca
     6181 gctctcggtg aggatggcgg tgccgtggcc atcgacttcg atgccgccgc cctcgcccac
     6241 caggtcactt tccagcagcg tcgcgccggt cacctgcgcc agccagggcg ccaccgcgcc
     6301 atcgttgcgc gcgctctgct tgccacccca gccgttgaag ttgaagtcga ccaggcccaa
     6361 cccgccccgg ccgttggtga cgaagcagcc gccgtagtcg cgcacccaga tgtcatccag
     6421 cggcacctcg aggaactcga tgttgtcgcg gccgcagcga tcctgcgcct gcttcaattg
     6481 cgccgggcgg cacagcacgc tgaccggctg gtggcgggcg atggtgcgcg ccagccgcgc
     6541 cacggcagtg ttcaccgcat cggcctgcgc gccccatacc cgcggctgcg cggcgaaggc
     6601 catgaacacc cgctcctgcg ggccgtgctc gtccggcatg cgccagatgc ctgcgcccgg
     6661 acctgccgct gccacgcgac ccggcaggcc ggccagaccc agggcggcca ggccgccaag
     6721 accggcggcg cccgccagct gggtgaggaa gtgacgacgg ttgctcatga caggctccag
     6781 ggccggtgtg ggatggacgc catgctgcgc ttgccgatcc ataagaacaa acgatagatt
     6841 cagccatcat ctgaacagtt ctgcttatct gaaatgctca agcactggcc acccctgaac
     6901 gccctgcggg gcttcgaagc cgccgcccgg ctcggcagct tccatcgcgc cgccgaggaa
     6961 ctgcacctga gccaatcggc catcagccag cagatccgcg gcctggaaga cgccctgcag
     7021 caaccgttgt tcttccgcca gggtcgcagc gtcaccctta ccgacgccgg ccttgatctg
     7081 ctggaaacca cccagtccct gctgcgccag ctggccagcg gcatccgccg gctcgatcaa
     7141 taccgcaaac ccaatcaatt gatcgtcaac accagcccgg cctttgcccg gcattggctg
     7201 gtgccgcgcc tggcggagtt ccatcgcctg aatcccggcg ccgacctctg gctgctgacc
     7261 agcgaggaag cacccgatat gaccacgcag acgctggacg tggcggtgcg tgatgacctc
     7321 gactcacagg cgcagtgcca gcatcgggtg ctgctgcagg accgcctcta tccggcctgc
     7381 catccggccc tgctcgccac gcccgtgcag cagcgcctga ccctgcatgg cgagcgcgaa
     7441 atggactgga gccagtggca ggtacagggc ggcgcggacg tgggccagcg ccgcgagggc
     7501 atgaatttct ccgagcccgg gcagctgctg gatgctgcgt gccaggggct gggcatcgcg
     7561 ctggtcagcg agttgctggc cgcgcgcgcc tgcgagcagg gactgctgca accgctggat
     7621 gatgcacgcg tgcgcggccc acgctggagc tggctggtgc atgaggacag cgccgcagat
     7681 ccgctggtga tcagtttcgg tgagtggttg ctggcgagtc tgcctgatcc agcgcgcgct
     7741 tgatcgccgc ctcggccaac ggcgccatca cttcatagcc cttcgcggtg ggatgcacgc
     7801 cgtcgtcggc cagctgcggg tcgaggccac cggccgcgtt ggccatcggc gcgtagtagt
     7861 ccaggtagat gagctgcttc gcctctgcat agcgcttcaa cgccgtattc aatgcacgca
     7921 ccttgggcgc aggcgtgatg cccggcatcc acgggtactc gctgaccggc agcaccgagg
     7981 ccaacaccac gcggacgcca tgcacgcgcg ccagatccac catcgcgtgc aggttgtctt
     8041 cgatcatcgc ctgcgtggac gggccggtgt tgccggcaat gtcattggta ccggccagga
     8101 tcaccaccac ctgcggcttc agcgccagca catcctgcgg gaaacgcagc agcatctgcg
     8161 ccgtggtctg gccactgatg ccacggttga gccagcccct gccgggaaag aacgaggcgc
     8221 tgccttccct gccccaacct tcggtaatcg aatcaccgaa gaacaccacg cgtggttgac
     8281 cgggcactgc cgcaggcagc tgtgagttgg cgtcgcgata acgctgcagc tgcggccagt
     8341 cggccagttg ctgctgcatg aaacgcactt cgtccgggcg cagccgttca acaggcttga
     8401 ccagcaacgg attgaccgcc gcctgttcgg ccgcctccag tggcgtgctc agcgccatga
     8461 caacggtgat tgcaccggca agcagcacgg atccacgcat gcggattctc cagatgacca
     8521 gacccgcagt ctagcgctgt gcacaaggct cagcgcgcaa ccgcacccgc cgccacgccg
     8581 gtcaccttcg ccggcatcca catgcccggc gtccagccgc tggcggccag gatggtcttc
     8641 gggttgtcct gctggatcag cgcacgcacc gcgtcacgct tgtccctggc ctgcaggtag
     8701 taggccttgg caatgcggta accgacccag tagcccaggt cgtagggctc ctgcgaaccg
     8761 ggcgtgtagt tgtacagcca cggcgaaagg tcggtgctgt cgaggtcgag tgcgaacgcg
     8821 ctttcgatat gcacttcgcg gccgcgtgtc cacgcggcat ggcggccatt gcccacgttg
     8881 ccggaaatca gttcggtgat gaactcggcg atgccctcac ccagcgacac gcgcagtacc
     8941 gtcgcatgcg gatcgcccgg ctcgaagtcg gtcggcccgg tctgctggat gtgcacgtac
     9001 tcatgcgcga tcacgtgaac gaagcggtcc tgcacattgg gattcatgaa atccgccgca
     9061 cacagcgctt ccaggccgat gatcacccca ctcttcgagg tcagcccgac cggccggcca
     9121 cggcccaccg cgatggtcac cggcgggaac cgggtctgcg ggtagatcgc ccgcaggttg
     9181 gcgaacacgt gcgtcagacg ctgcttcacc atcggcagct cggccaggca gtttcgtccc
     9241 tgggcgtaca gctcgggctg ggcgaccatg gcttcggcaa tccgttcggg agtgacccgc
     9301 cgcgccttgg ccaactccgc caggcccacc gagccctcgg ccatgtatcc acgcagctgt
     9361 gcaacgctgg gcttgccgcc ggcagtgtcg tacagcgcgt agaagcgggt gacatcctcg
     9421 gtgaggatct gcggcgcggc cggctccgcc gccatggcca tgccaaccgc cccggtacag
     9481 gccagggcca acaggccgcg caggatcatg aacatcgctc cgtccttggt ggagtgcatg
     9541 cgaagcgcgc aatctaccac tctgcccgac ccgccgcagc aggcggatgc ggccgctccg
     9601 gcgctgtgcc agactcgctt cggcacctgc cacggatgat ggagcaccgc acgatgatga
     9661 tcgtccccgc gtactgggcc gaagcccgcc tgcaggcccg tttccgcggc cggccggtgg
     9721 tcgtgcgccg cttcggctgg tccgacgaag gcccggccga ggcccagggg cacgccgacc
     9781 gtcgtgccaa tgaagccctc aacgccatcc ttgccgggca ggcactgccg cgtcgcgagg
     9841 tgcgcagcaa ctacggtgtg gaaggtgttc cgatccgcga gcagatcgtg cggcgcgacg
     9901 gcgatgtcat catcacccgc aacagctacg gtgcgctgtg cctgaacacc ccggacgtgc
     9961 tgttcgccga catcgaccac gcgccgcccc cggcaggttg cgtgatgccc gccctcatcg
    10021 cggcggtgct gctgtttgcc ggcgccatca tcggcaccct gctctggcac tggctggtgg
    10081 gactggtgct gggcgtggcg gcagtggtgc tggtgaatac cgcgctgctg atgcaacgca
    10141 ggcgccgcct ggcagcggcc ggtggcgccg agggtgtggc cctgcagcgg gtcgcggcct
    10201 tcagcgagca gcatccggat tggcacctgc gcgcctaccg gacgccggcc ggactgcgcg
    10261 tgctggccat gcacgccacg ttcccacccg aggacgaaca gctgcaggcg ttcttcaagg
    10321 cactgggcgc cgacaccctg tacgcgcgca tgtgccggtt gcagcattgc ttccgtgcac
    10381 ggctgacacc caaaccctgg cgcgtcggcc tgaagcaccg catccgtccg ccggtggccg
    10441 cgtggtcagc cgagcaggcc aacaacccgg accgcctggc ctggattgcc gaatacgaga
    10501 agaagagttc cggcttcgcg gcctgcgcct atctgcgcag ctttggtgac accacgcgta
    10561 cccacgccaa ggccgaacac gtgcgcgacc tgcatgatcg cctgtcgcac gcgctggacc
    10621 ggctgccgct ggcgtgagcg cggcagacgc tcagtcagcg ccctgcacga acggctgccc
    10681 tgccagggta gtgcccagcc gcaccgcgac ctgctgatcg cccttttcga aggtcgtgac
    10741 gcactctttt ccgcccttct ggcatccgac ttccggaaag ccttccagcg attccggcgc
    10801 gccctgcatc ggctgggcct gccagccggc cgcatcgagc aggcgcttgg ccttggcgta
    10861 aggcatgccg gcgatgatcc ccagctgggc cagctcggca ggcagggcct gggcgtgtat
    10921 cgcaggcgcc tgcgccacca tcagtaatgc agcaagaacc acaaccttca tcggtgcgcc
    10981 ctacaactta cgctggaact acagggtagc ccagtggcgg ccgctgtcgg tgcccggatc
    11041 accctttgtt acccaatcca ggcaggctgt tacctggtgt taccgttcgg ccaatgcccc
    11101 gccggccgaa gctcatcgac ccaacccgcc cgcaacggcc cctgctgccg gaaccgttgc
    11161 gggcatgcca cctcatgcgc aggccggatc agcccggcac aagtgtggcg cgcgcctcct
    11221 gacggtgcag tgcacccgcc cacagggatg ggtcgacatc ggccagctgc acaggtacat
    11281 cgccaacgag cccggtggca gcacctgccc ggaacgcgcc catggcccct accagatgct
    11341 gcagctcggc ctccagcgac attccctccg gcgcaggcgc agcgtcagac gtcatgctgg
    11401 tgcgaagtgc cgtcatcggt gtcaactgac tggcaatctg atcggcggtg atggcgtagc
    11461 caccatcgcc aggctgcacg aaagcgatgg cgtactgccc accctggaaa tgacgaagca
    11521 cacgcatctg ctgcccggcg ctgccatcca ccctgacgac cagatcatcg ccgtcacggt
    11581 gataactcag gcggctgcga tcaatgccat cgaagtacaa ccagtcggta ccaccgccgg
    11641 tgttgtccac cgtatcggcg cccgatccgg cccggtagaa ataggtgtcg ttgcccactc
    11701 cgccgatgag catgtcatcg ccatcttcgc ccaccagctg gtcatcgccg gcgccaccga
    11761 tcaggatgtc cttgcctgat ccgctgaagc tgccgttgcc accggacagg taatcattgc
    11821 catcgccgcc ttccagcttg tcatcgcccc ccattccgaa caacttgtcg tcgccggcaa
    11881 ggcccttgat caggtcacgc ccgctggtac cgaccaactg ctcggcgttc gccgtaccgt
    11941 tgatcttgga cgggtagtcg gcatcgtttc cggcgcccgg cgtacctccg ccgtcaccgc
    12001 cgccgttgct gaccagcgca ttgatggccg cggtgttgag cgcattgccg gtggcagcct
    12061 gcaggtagtc gagcgcccag tcaccgccga ggaagtgatt ggtcaccgtg acgcgctggt
    12121 tggcgtttcc gttcacaacg atcaccagat tgtcaccttc gcgggtgaaa gcaagctgtc
    12181 cggtggtaat gccgttctgg aagaacagcc agtcgacgcc gccccccgta ttgtcgatca
    12241 catcgtttcc gccgccatgg atgtactggt catcgccact gccacccaca agcacgttgt
    12301 tgccgtcctg gccgcgcagg gtatcgttgc ctgccccgcc ctcgagccgg tcgttgccgg
    12361 agcccgcagc gctgccgttg ccgcctgcaa gctgatcatt gccatcgcct ccgcgcagcg
    12421 tgtcgtcgcc tgccatgccg aacagcgtgt catcgccccc cagtccctcg atcaggtcct
    12481 tgccggcagt gcccaccaac tgctctcccg ccgaggtgcc ggtgatggtc ttgtcgaatc
    12541 cgcccccact gccgccactc accagctgat tgatctgggc cgcgctgagt gaactgcctc
    12601 cgtcaggctg aacctgatcg atggcccagt ccccgccgag gaagtgattg cgcacgcgca
    12661 ccgccggcgt ggctgcctgg tcgatccgga tcaacaggtc atccccctcg cgggagaagc
    12721 tcagccgctc ccgggtgacg ccgttctgga agaacaccgt atcgttgccg ccaccggtat
    12781 tgtcgaccac atcgctgccc gagttcgcat cgaccagata ggcgtcattg ccagctccgc
    12841 ccagcagggt atcgttgccg cccccaccac tgagcgtgtc gttgccgcct cctccgttga
    12901 gcgtgttgct gccgctgttg cccgccaggt agttgcccag cgcgttgccg gtcccgttga
    12961 tgtcagcact tccggtcagg aacaggttct ccagatccgc cgacagcgtg taggaagccg
    13021 aagactgcac ctggtcagtg ccaccgccgg caagctcgat gatcgtgtcc gccgtattgt
    13081 ccacgatgta gatgtcattg cctgcgccac cactcatctg atcagcaccg ctgccgccgt
    13141 caagatagtc cgcaccattg tcaccgcgca ggacatcgtc accgctgccg ccccatagct
    13201 ggtcatcgcc atcaccaccg acaagggtgt cgttgccgtc catgccgctc agcttgtttg
    13261 ccgcagcgtt gccattgatg acattgtcca acgcgttgcc gttgccggac acaatgccgt
    13321 tggccaggat caggttctcg acattgtcgg ccaggatcag gttcgtctcg aagcggcgct
    13381 cgatggtatc caggccgccg ccttcgtcct cgaacacgcg atcctgggcc gactcgatga
    13441 tgtacagatc atcgcccagg ccaccgtaca gacgatcagc acccaggccg ccttcgagcc
    13501 gattgttgcc atcattgcca tacagctcgt tgtccaggct gttgccaacc ccgctcaggt
    13561 tgccggagcc ggtcagcacc aggttctcca gatggtcgcc cagctgccag tccagcgccg
    13621 actccacggt atcgatgcct tcgccggcca cctcgatgac aacgtcgccg gcactgtcga
    13681 ccacgtaggt atcatcgccg ccaccgccga ccaggcgatc ttccccggcg gcgccatcaa
    13741 gcctgttgtc gccctgattg ccgatcaacg tattgttgcc ctggttgccg gtcccctcat
    13801 acgcaccgtc cagcagctcg agccgctcga cattctcgcc cagcacgtag cgatggctgc
    13861 cactgcgaac agtgtcgtca ccgccgccgg ccagttcgat cacctgctgg ctcgggtcgc
    13921 tcaccacata gatatcgtcg ccctcaccgc catacaggcg atcacctgca cctgcaccac
    13981 tcaatacatc attgcccgcg ccgccatgca gatcatcgcg gaactgggtg ccggcaagta
    14041 catccgcgcc gtcggtaccc cgcagcacgt tgcgtacatt caccgtcagc caggccgtgg
    14101 tgcgctgccc ccagctgtcg gcggcgatga tgtccagcga aagatccgca ccgccattgg
    14161 gcggtgtgcc cgtaagctcg ccggtgagcg gatcgatgac cagccaggct ggcgcgttct
    14221 cactcagcga ataggtcagc gtgtcctgtg cctcatcctg gaacatgccc gagggaatct
    14281 tcgccgagaa ggcggtctca ccgatggcct cgaactcgac gaacgggatc agcgtgaccg
    14341 gaggcttgtt ggtgtacggc agctggtgca gatcgccgcg gcgcacggtg ccgtcggcga
    14401 acaggaagtg gtcgatcacc ccacgcacca ccagcctgtc gccctcctca taccagtagc
    14461 tgctgaccgt aagctgatca ttcggatcgc tgccgacctg cacgatcagg tccagaccgc
    14521 tgcgactgaa ggtgacgtgg tccgggtcga tccctgcgcc aaacaccaca cggtcgcggc
    14581 cggcgccggc ccaggaatcc accgtatcgc gaccatcgcc tattccgtag tggaaatcgt
    14641 cgtcgccata accgcccctg agcacgtcat cgccggtacc gccatgcagg tccgcaccgc
    14701 cctggcctgc gatcagcaga tcattgccct cttcaccgta caggtagtcc cggctggcct
    14761 tgtagaccgt gttcggctca cgatcgccgc ctttgagagt atcgttgcct ccgccaccgc
    14821 ggatctcgtt gctgaacccg tttccggtca ggacgttgtc accggcatcg ccgcgcagat
    14881 tcgcatggaa cgcgccaccg ttgatggtgc ccgcgccgcg tccatcaggc accaggttgt
    14941 tgcccagctc caggttctcg atatttgcga aattggcgac atcgaaccac tggttctgtg
    15001 gcgcgccatc ctcgatggcg tcaatcacca cggtatcgtt gccctcgccg gccagctcca
    15061 ccaccgtatc gttggcactg atgatgtagc gatcatcgcc catcccaccg tacaggtggt
    15121 tggcacccat cgacgtgcgg ccgttgagcg tgttgttgcc cgcattgccc caacctgccc
    15181 aatcgccact gccaaccagc tcgaggttct cgatgttgac cagattggcg atcgaatagg
    15241 acaggctggc acgcaccgta tcaatggaga agcggttgtc agagccccag tcaccttcga
    15301 tgatcacatc gccaaggctg tcgaccacat aggtttcgtt ggcctcggtt ccgatcagcg
    15361 tgtcattgcc ggcaccaccg tcaagcacgt aataacgtcc actatggctg cccatgtacg
    15421 acggcttgcc gaactggatg atgttgtcca gatcattgcc gaccaagctg cggggaatgt
    15481 gcacgatcca accgggatag gacggattct gccaatgcca ggtactgctg ttgaacacgc
    15541 ccaccagatt ctcgacattg gccgtcaagg tgtacgagaa ggactcggca aagacggtgt
    15601 ccacgccttc accttccagt tcaatgaccg tgtccgggga gctgccgtac tggtagccgg
    15661 tgctgatgta gtagcgatca ttgcctgcgc caccgcgcag gatatcggga ctgccgtcgc
    15721 cgaactcgtt ggcatacagc atgtcgtcac cggcgccgcc atcaagcacg tccgcgccgc
    15781 catcgccgta gatcacatcg ttgccgtcgc caccgaacag ctgatcgtcg ccttcgccgc
    15841 cgaagattcg atcattgccc ccctggccat ggacgatatc gttgccggca ccggcacgca
    15901 ggttgttgcc ttcatcggtc gccgtgtatg tatcgtcacc gtcggtaccg ttccagctgc
    15961 gcgccgtctc gacgaagtcc tcggcgctca tccacgtgcc atcgtcgaat tcgatgatgt
    16021 ggctgcgatt gctcccggca aggaatccat ccaggctcag tgactggaac cccgcgccgg
    16081 tgaagaaggc gagcatcagg tcatcgccgg agatctggac gttgttgatc atcgcccgag
    16141 tcagcccagg gccgattcgg atgatgtccg tgcccgcctc ggcgctgccc agattgatga
    16201 tgcggtcgta gccatgaccg aagtcgtagt gatagatgtc gttgccggcg ccgccgtcga
    16261 gcacgtcatg gccaaaacca ccgatcagca ggtcatcgcc gccgcccccg aacagccggt
    16321 cgttgccctc caggcccatc agcgtatcgt tgccgtcggc gccatacaga ctgtcatcgc
    16381 cgctggtgcc cagcatgctg tcatcaccgc cggtaccgaa gacaagcgac ggcagctcca
    16441 gttgttcctc caggcggccg cgatcggtga cgtcggtgcc gcccactgcg atcccgcccg
    16501 ctccggtgga tgcaaagtag ttgtgcacca ccaccgtatc agcgccgttg atgtggcgga
    16561 tgatcagatc cagcccgtac gcctcgtagt gcaggtcggc ctggttgatg cttgaaccga
    16621 aggtgatgcg atcactaccc ggattgccct cctgcaggta gacatgatcg ataccaaacc
    16681 ccgcttcgaa gtggtactgg ttgttgccgg tgccaccgta gagcacgtca ttgccggtgc
    16741 cgccatccag gatgtcgtcg ccggcgccgc cggacagcag gtcattgcct gcgccaccgc
    16801 gcagcgtatc gttgcctccc gggccattgt cttcatcacc gtacaatctg tcatcgccgg
    16861 ctccgccatt gagctcgtcg tgcccgccct gcccgaacag cacgtcgttg ccagctccgc
    16921 cgtcgagata gtcattgcca gccgcaccgg aactgccggc accgccatcg ccggccagga
    16981 cgtcatcacc ggcgccgcca tacaggctgt cgttgccatc ctcaccaaac agacgatcag
    17041 cgccgttgcc gccgttcagg gaatcattgc cggcgccacc ctgcagctcg tcgtcgccat
    17101 cgccgccgtc gagcgtgtcg cgcccatcgc cgcccatcaa catgtcgttg cccgcaccgc
    17161 cggcaagcac atcgtcgccc gcttcaccgc gcagggtgtc ggcgccctcg ccaccggaca
    17221 gtgtgtcctt gccagtccca ccccacagtt cgtcgtcgcc ctcgccaccc atgagcgtgt
    17281 catcgccttc gccgccgatc agcacatcct tgccggcgcc accatcgaga tgatcattgc
    17341 catcgccacc ttccagatga tcggcgccct cgcctcccag cagaacatca ttgccatcct
    17401 gcccgaacag ccggtcggcg ccattgccgc cgtcaagggt gtcgtcaccg tcttcgccct
    17461 gcagctcatc gtcaccgtct tcgcccatca ggcgatcatt gccggtaccg ccaaccagaa
    17521 gatcgttgcc aatgccgccg gacagcagat catcgccagc ctggccggac agctggtcat
    17581 tgccggcgcc accccgcagg atgtcgttgc cgccgccaac gattccggat tgcgggtagt
    17641 agtcacccca gatcagatca tcaccgtctc caccgtcgat caggtcattt ccaccttccc
    17701 cccacatctc gtcgttgccg gcaccgccgt cgatgctgtc gttgccatca ccgccggcca
    17761 cctggtcgtt gccggccccg gccaggatca catcgtggcc gccttctcca ctgatcgcat
    17821 cgtcaccatc tcccccatcg aggtaatccg ctgcactgct gccaccgagc tggtcgttgc
    17881 cgtcttcgcc aaacaggctc acaccgctgg tgtaggtgat gccggagccg ccctccgtgg
    17941 tgatccttcc ctggcccagc gcgatgccat ccggctcggt ggcgctgctg tagaccaggg
    18001 tgtaggtatc attgtccagg cgccggaatc tgaacgtcca gcctggcgcc accgaggcgc
    18061 cactgaaatc gaacatgccc gacaggccat agtcgaagcc gatggccagg ctgccatcat
    18121 cgcggcgtcc cagcctctgc atcgcgctcc agctgaagaa ggcctccacg tcgcgccaga
    18181 tgccggattc ggtaatcggt acacgtgaat tcgtgcgcac atcaaagccg aagttccact
    18241 gtgcgttgag gacatcattg ccctctccgc catgcgcgat cgtccccgat cccaggccgg
    18301 agatgaagtc gtggccgacg ccgccggtga tgatgtcggc gccaccgcga ccgttgatga
    18361 tgtcactgcc ttcaccaccg tccagggtgt caccactgcc gaacgcggtt ccccagatca
    18421 tgtcgcggcc attgccaccg gacaggttga ccgcagcgct gggcacgctg ttcacgaagg
    18481 gattgaggaa atcagccagc ccggtgcctc ccgtgcctcc ctggccgggc ttgaactcgg
    18541 gcagcgtgat gcccaggtgg ccctggctcc agccgtcgac catcacgctg ccggtgtcgg
    18601 tgccactgcg gatgatcagc ttcgaaccgt tggcgaccga gtggctgacc ttgatctggc
    18661 catcggcgct ctcccaggtg gtggctgacg tcgcgatgag tccgttggcc caagcgccgt
    18721 tgccgttgat gatcacggta ccgttgccgt cggtatcgac gatcgtatcc agatcgccgg
    18781 ccaggccagt accaatggtg taggtgtcaa aacccagacc gccgtgcaac tggtcgctgc
    18841 cggtaccgcc gtcgagcgta tcgttgcccg cgccaccgaa cagtgcgtca ttgccggcgc
    18901 cgccgttcag ggtatcgttg ccggtaccgc cgtcgatcac atcgttgccg gccaggccag
    18961 agagcacgtc tgcgccatcc tggccgaaga ggacgtcggc ctcatcggta ccgtcgatgg
    19021 catcaccctg cagcgagcca taggcggtca gtccgctccc ttgcttgacc gacagcttca
    19081 gcacctcggg cagggcattg aggaattcgc ggatctggtc cttgttgaac tccccgtcct
    19141 gggcatccag catcagcgcg ccggtgaaga acaggaaggg atccaagggg cgggcaaccc
    19201 atccggagcc gtcctccagc atttcggtgc tcaaccgcgc cagccatgcc gagtacacat
    19261 cctcgttcgc ccccaggcgc aggaaccatg tgccggcgcc ctgcggatcg tgctctgcgt
    19321 tcttgaccac ctcgaccagc agttcgatgc cggccttggt gtcccatggc agacgaccgt
    19381 tgctgtcgag catcgagtcc cagatggcgg cacgctcctg ttcgtccagc agcttgaacg
    19441 gcgtattcaa cgtccaggaa tcgaccggca gattgagctc ggtgaagatg cgattgtgga
    19501 aggtccatgc ttcgtcggcg gtaatctcac ggacaacatc accggccgca ttggcgatct
    19561 ggtcaagcat atccaggaga ccccgggcca tgcccgcgcg cacggcctgg atttttgcat
    19621 cgtctaccgg aactccatga tcttttgcgg tttcctccag aaactccagt gcggtcagac
    19681 cggagaacat gttgcccacg gccacgccac tggccagccg ggcatagcga tgcccgaatc
    19741 cggcgatgaa ctgatacacc tcctcgatct tgccgctgtc gagcatcgcc cgcgccattg
    19801 cacgctgttc ggcggtcatc gtttcaacca tgttcaatct ccttcacgtt ccggtgtgta
    19861 gggcaatggg acctgatgcg tttcagatag gcctggacat ccgactcgat cttccgccaa
    19921 tgcggcaaca ggttctgacg ataaacaacg gtggtgcgta cgttcagcag cccaggctgc
    19981 tcaagcgagg cctcgcacag tggcgtccac tgcggaggtg cgtattgcgg cccggtcatg
    20041 cagcggatca ggacggtggg tgcgcgtgcc gggtccaggc tgtcggtata ggtgaccctg
    20101 ttccagttga agctccggct ctccggcaac gccggtctgg ccatctccag tccaagggcg
    20161 gcgtcacgac cgaactcgaa tgtgacctcg gcgggcagtc tttgatggtg aaggcggtac
    20221 agtccccagt cacgaatctg ccgcagcgtg atgttctcgc cctcgcctgc ctggttcagg
    20281 ccgatgtcaa tccagttcga atcgccgttc cccgcagagt gatgccggtc gtagtcctcc
    20341 cgggtctgtg cgttgcgcgg caccatctcc ggccaacgca gctggatgga aacgctgcgc
    20401 aacggtgccc cgcagcttga cgaggggtcg gcgcgcgcgt cccggtcctg ctcccatatc
    20461 cacacatcct ctctgggcac ctccagcgcg actccaccaa tgcgtccctg cagccgtgcg
    20521 gcctctggct ctttcctgtc ggacccgcac cccaccagca tcgccgacat cgacaagcac
    20581 agcagcaggc cgaaccgcag ccggcacacg cttgccagcc acctgccagc cactgcagga
    20641 tcgcgctcag cgttcacgca gcgattcctg cgcgtgctgc tgaagagggc tgagcagata
    20701 gtcgatgacc cgccgccgcc ccgtcttgat ttctgcggac aggctcatgc cagcactcat
    20761 cctcactttg acgccgccta tatccagctc ggaacggtcc aggcggatgc gtgcaggaaa
    20821 caccaggccc agttgctcat cctgtgccgc atcatgggag acgctcacga cggtaccggt
    20881 gagatagccg taacgtgtgt aggggaaact gtcgatcttg atggtgaccg cctggcccgg
    20941 ccgtacgaag ccgatatcct tgttgagcag cgttgcctcc acttccatgc catcaccact
    21001 gggcaccacc accaacagcg gctgtgccgg cgtcaccacc ccgcccacgg tgtgtacggt
    21061 cagctgctgc accgttccgt ccactggcgc gcgcaacgtc atctgacggt tgcgctgacc
    21121 ggtcttggcc acttccggcc ccatctgccc gatctgctcc tgggccttgc gcagttcatc
    21181 aagggcctgt tgccgggtat cggtgaccag cacgcgcagt tcttcccgtg ccgccagcag
    21241 tgccgagcgc agctcctgca cccgattgcg ctgcgtggcc aggtcccgct cggcggcgat
    21301 gcgttcctgt tcgcgcagca gatagtcatg ccgccctacg tagttgccct ccaccaggcg
    21361 cgcatagtcc gccgcacggg tgcgtgcgat ctgcgccgaa tcgctcagcg gctggatcag
    21421 gccctcggtg gtgtgaagct ctgcctggcg ctgttggatg ccggcctgca agccattgcg
    21481 ccgggcctgg aatgcgtcga actggctgcg cacgagcacc tgttcgtccg ccagccgctg
    21541 cgcaggcagc ctgctgtcca gaggcagctg cggcacgttg cccgtgtcga aggccaccag
    21601 caatgcatca agcctcagcg ccgccaaccg tgcattggtc agcgcttcgt cagcctgggc
    21661 gagctccgcc ccggtgcccg ccccctccag ctcgatcagc agttcacccg ctttcaccgc
    21721 ctgcccgtcg cgcaccagta tgcgacgcac caccgcagtc tcggccggct gtaccacctt
    21781 ggtccgtgag ttgacgacag tcttgcccgg agccaccgct acgatgtcca gctggccgat
    21841 gcatgcccat aacagcgcca cgcagaacag cgcgatgatg atccgcatgc tccagcgtga
    21901 cgttggcgaa atgggggtct cgatcaactc caggtgggcg ggcaggaagt cacgctcatc
    21961 tgccgttcgc tgtggcgcct ccatctgcgc ccgtgccttc caggctgcac cggccacgcg
    22021 cccatatcgt cgcaggaaat cgcctgcagc ctgcaaccga tgcttcatgc cgcacccgcc
    22081 tgcagccgat gcaggcgcac atagaagccc tccggccggc gcatcagttc ctcatgtgca
    22141 ccaacctcga cgatccgccc cttctctact accacgatgc ggttggcgtg gcgcaccgta
    22201 gacagccggt gcgcgatgat cagtacagtg cggcccttgc atatcgcacg catgttcgac
    22261 atcacggcgt gctcggactc gtagtccagg gcgctggtgg cctcgtcaaa tatcaggatg
    22321 cgcggatcgg tgatcagcgc ccgggcgata gcgatgcgct ggcgctgtcc accggaaagc
    22381 cccgtgccat gctcacccac cttggtgtca tagccctcgg gcaactcgat gatgaactcg
    22441 tgcgcgccgg caagcgtggc ggcctggatt actcgttcca gcggcatgcc aggctcgccc
    22501 agcgcgatgt tctcgcgcac cgagcggttg aacaggaaat tctcctgcag gaccacgccg
    22561 agttgtcgcc gcaaccatgc cggatcggcc aacgccagat cgtgtccatc gatcagcacc
    22621 ctgccctgtt ccggcgaata caggcgctgc accagcttgg tcagcgtgct cttgcccgag
    22681 cctgagcgcc cgacgatacc aaccacttcg ccgggccgga catccagttc gatatcagca
    22741 agcacggccg cagcgtctgg acgatagcgg aacccgacgc gttcgaacgt gatccggccc
    22801 tggatcggag gcaatgccat ccggcttccc ggcagctcag tgcgcgtatt gaggatatcg
    22861 cccagtcgtt cgaccgagat cccgacctgc tggaagtcct gccaaagctg agccaggcgg
    22921 atgatcggcg ccgccacctg gccggacagc atgttgaagg caatcaactg acccaggctc
    22981 aacttgcctt cgatgaccag cttcgcgccc cagaacagga tcgcaacggc caccagcttc
    23041 tgcacaagct gcacgctctg ctggccgagc gtggcgatgc gggtgacgtt gaagcctgcg
    23101 ctgacgtatc ccgccaactg gctgtcccac gtgcgggtca ccctcgggtc caccgccatg
    23161 gccttgaccg ttccgatgcc gctgacggtc tccaccagaa acgcctggtt gtcggcgcca
    23221 cgctggaact tgtcattcag gcgcctgcga agtacaggcg tcaccaatgc cgaaatcagt
    23281 gcatacaccg gaagcgaaag cgccacgatc agggtcagcc agccgctgta gtggaacatc
    23341 acggcaagga agacaaccgt gaagaacagg tccagcaccg aggtcaacgc ctgcccggtg
    23401 aggaaactgc ggatgttttc cagttcccgc acgcgggcga tggtgtcgcc cacgcggcgt
    23461 gactcgaagt acgccaacgg aagcgcaagc acatgccgga acaggcgcgc gccgagttcg
    23521 acatcgatct tgctgctggt gtgtgagaag acgtacgtac gcaggcctga cagcaccacg
    23581 tcgaacaccg ccatcgaaac caggccgatg gcaatcacat ccagcgtggt gagcccccgg
    23641 tgcaccagca ccttgtccat cactacctgg tagaacagcg gtgttaccag ggcaaacatc
    23701 tggatgaaga acgagacgat cagcacttcg accagcaagc gccggtactt gatgactgcc
    23761 gggatgaacc agctgaaatc gaatcttgcc agttcgccca gcaccgaggc gcgcgaggtc
    23821 acctgcagca ggcgtcctgc atagcgctgc cccagttcgt ccagcgtgag cgttcgcggc
    23881 cgcttttcgg ccaggtcgtg gatgagcacc tgatcggcgt cgatccgcgc aatgatgaaa
    23941 ggatgcgcgc ccgccaacgc cagcgccggc agcgtgaccc tggaaaggcg ccgctgcggc
    24001 gtcgctgaga tccgggcctt gaggcccaac cggcgggcgg ccagcagcag ggtcgtctcg
    24061 tcaaatgctt cgccgttgcg tccatgcgca tgcgccagct gctccgcatc cgcagcaatg
    24121 ccatggaact gcgcaagcag caccagcccc cgcaacgcca gatctggctg ggcgtgaacc
    24181 acgcgctcgc gcgcgacgcc ctgactggct accgtcccct ggtgcatgtc atccctgaat
    24241 gcgttttccc cggcccgatc atcggatggg cctcccgcgg atgtcaagac tgcgtgatac
    24301 ccgcctgatc gacgctccct cttcgccggt tactccccat ccccgccacg cggcagccag
    24361 cagcagggcc gccccggggc ggccctgctg catctcactt ggcgttcttc acgtaggtgt
    24421 cgaaccagtt cagcatttcc gaaaccagct gctcattcga ttccagcgcg gtgtaccagt
    24481 gcggctcgtt cggcagcatc accaggcggg tggtgccgcc gttgccacgg atggcctggt
    24541 acagcttgcg cgactggaac ggttcggtac ccgggttggc gtcgtcctcg ccgtgcacca
    24601 gcagcagcgg cagcttgatc ttgtcggcat agaagaacgg cgaggccttc aggtacacgt
    24661 cctgcgcctg ccataccgag cgacgctcgt tctggaagcc gaacggggtg aaggtcttgt
    24721 tgtacgaacc actggtggcc acgcccgcct tgaaaagatt ggtgtgcgcg atcaggttgg
    24781 cggtcatcag gccaccatgg ctgtgaccgg tcacgccgat gcggttgcgg tcaaccacac
    24841 ccatgtccac tgccttgtcc accgccgcct tggcgtcggc ttccagctgc tccaggtagg
    24901 tgtcataggc attcttcggg tcgcccacga tcgggaacga ggcgttgtcg atgatcgcgt
    24961 agccggccag cagcatcagg cggtacggct gcaggcgggt gaaggtctgc tgcgaaccgg
    25021 acacctgccc ggcctgcgcg gcgttggcga agtcggccgg gtacgcgtac aggatcgccg
    25081 gcacgcgctg tccttccttg taacccggcg gcgtgtacag ggtgaacgac aggtccacgc
    25141 catcggcacg cttgtaggtc accagctgct tcttgatctg gcgcacttcc ggggtcgggt
    25201 cgaccagtct ggtcagcgca gtggcgctgg aggcgaactg cgcctcgccg gccttcgcat
    25261 cggccaccgc ctcaccctgc tggcggatga aggcgttcgg cggatcgatc accgactggt
    25321 gccaggtcag gtagcggccc ggcgtggcgc tgaaaccgag gaactgctcg taggcatcgg
    25381 cactgctgcg gaacaggcgc tcgctcttca gcgtacccag gtccaggcgg tcgaggaacg
    25441 gacgatcacc ctgcggcgaa gcgccacggc cgctgaggaa tacatggttg ccctcacgac
    25501 gcacgaccgg cgcgccgttc ggcaggcggg tgaagaccag gttgccgggg ttgccgtaca
    25561 gctcatcgct ggacatgtcc cacagcaggc gcccttcctt cttcggctgg tccacgtcga
    25621 cgatgcgggt ctgcatccag tggcggttct cgtcgttctc gtactggaaa gccacggccg
    25681 gatcggcggt ccacgcgaag ccttcgaagc gctgcgcagt gcgggtgatt tcggtcggct
    25741 tgccgttgaa cggggccttc agcatcagca cgcgatcacg gtgcggcacg ttgaccttcc
    25801 agtcgccctt gtccagcgct tcggcataga ccagggtggc cggatcggtg gcgcgccagt
    25861 cgaaaccgcg cgggccttcc ggcacgccgt gcaccggcac acgatcggcc agcggcaggc
    25921 tggcgatcgc ggtggtcttg ccgctggcga tgtccagcac cgccacgtcg ttggcgaagc
    25981 gctggtaggt caccgcatgc gaatacgggg ccttgatcga ctcggtcagc acgtgcacgc
    26041 catcgggtgc ggcgctgacc tcgttgaaca gcgccggctg cccgaccggg cgcacgctgc
    26101 cagccgcagc atcgaccacc gccagctgcg aggcgccgta gtaggcgaac agcttttcgt
    26161 catgcacgct ggtcagcgtg tcgcgcgctt cataggtgct gctctcgccg ctgcttccca
    26221 gcgactcctg cgcgtccggg ccggtcggca cgccgccatt ggacggcgcc gggccctgat
    26281 tggccggcac cagcttcacc agcaggttct ggctgccgcc cagccactgc acggtgttgc
    26341 cgaagatcgg gttcagctgc acgttcggca cctgcttcac ctggccggtg gcggcatcac
    26401 cgacccacag ctgcacgctg gtgtcgaccg cgttctggaa ggcgaagtgg ctgccatcgg
    26461 ccgaccacag cgcgccggtg gcgcagccct gcggcaggtt caccttggtt tccttgccgc
    26521 tgccgatatc gaccagggtg aagtcggcca cgcaggccgg aatgccatag ccgccagggg
    26581 tgtcatggcg gctgcggttc ttcggctcca ggcgcacgcc ggccagcttc agatagggct
    26641 gggccacgcg gctgatcgac ggataggtct gcgcggtggt cagcagcagg cgctgtccac
    26701 ccggcgccac gttcggcgcc ggcggcggcg gtgccttcag caccttgagc aggtgttccg
    26761 gcggcttcgc gtagtcggca agcgccgggc cagcggccag caggccgacg gtggcaacgg
    26821 caatggccgc cgccagagag gttcgacgga tcagcatcct tatcccctgg ggtgtgaatg
    26881 ggcgcccgag gacgggcaag ggcccgaatc tagcaccgca ggggctgtag tgaatgggcc
    26941 ggaaggacta gtggccggat ggggcaaagt gcagcgccgg gaggtgccgg ggaactgccg
    27001 gcatctgcca ggcgtggcct ggcactactg ctgggcgtgc aggtcccagg tggccaggta
    27061 gtccgggtcg accacgatca tgccgctgtt gcgcatgcgg tactcgcccg gttcggcggg
    27121 caggtactgg tcgagcatcg gcggcaggta gcgctcgtgg ccatcgttct cgtcggccag
    27181 caccacgcct tcgtcagcgc tgatgcgcag caccgtaccc gcgtactgct ccagcccctg
    27241 cacctggcca tcaccgccat agcgggtgac accgaccagc accagcttgc cgatcatttc
    27301 ctcgaccttg gcatcatcca gcggcggcag catgggattg aattcgtcgc tcatcggtac
    27361 acctccaaag cctgcaggga cagcgtggac acagtggcct tccacgcagg cgatgcctcg
    27421 ggcatcgcaa tcggcaacgt ggaaacggca ggtgtctgga tcgccggaaa cggcagcggc
    27481 gtgccggatc agcggtgtgt gaagcgtggc aggtgttgcg ggtgacggcc atccatgccg
    27541 gcatgtctgg ccctgtcaga ccagggtcaa caccacgcgt tgcagtacat gcagagtgaa
    27601 gcgtgacagc tgcgcagtag cggcatgacg gcctcctgtt gaaggtcaca cgcgggcgtg
    27661 atgctccgtt gaatcgaatg ctgccatcgt gcacggaagg aagaagtgaa gactgcgcgc
    27721 gatccttgcc agcgcaccgt gccaggcatc cagtgcgtcg gagcctgaca ttacctgccc
    27781 cggcggccaa cgctgttgcc acaatgcgtg cctgcttccc tccacgcatt cacgctgccc
    27841 ccaggccggg tacggcccca ccggcgccac gctagaatgc gcccatgcgc accgtacatg
    27901 ccctccgcta catcacccct ttacgggaag gtggctccct gccggccgtg gtcgagaccg
    27961 acgacgacgg catggccgtg ctgaagttcc gtggtgctgg ccagggaccg aaggcgctga
    28021 tcgccgagct gattgccggc gagatggcgc gcacgctggg cctgccgatt ccggagatcc
    28081 tgttcgtcga actggaccgc gagttcgccc gtaccgagcc ggacccggag atccaggaac
    28141 tgatccgtgc cagcgagggc ctgaacctgg gcctggacta cctgcccggc gcgatcaact
    28201 acgacccggc cgcgatgccg gtggacgccg acctggcttc gcgcatcgtc tggttcgatg
    28261 cgttcaccag caacgtcgac cgcaccacgc gcaatcccaa cctgatggtg tggcatcgaa
    28321 agctgtacct gatcgaccac ggtgcggcga tgtacttcca tcacgattgg gccaacgccg
    28381 gcgatgcctg cgagaagccc ttcgtactga tccgcgacca cgtgctgctg tcgttcgcca
    28441 gccgcatcgc cgaggtggat gccgaactgg ccgcccgcct gaccgatgcc gagatcgagc
    28501 gcatcgtcgg cctggtgccg gacagctggc tggtcaacga gccggcgttc gacagtcctc
    28561 aggcctatcg ccagggctac atcgactatc tcaagcaccg cctgaaagtg cgtgcggtgt
    28621 tcgtgcagga ggccatccgt gcccacgctg cacacgtatg actatgcggt catccgcgtg
    28681 gtgccgcggg tggaacgcga agagttcatc aacgtcggag tgatcgtgtc ctgccccggc
    28741 gcgcgtcatc tggaagcggc catcgagatc gatccggcac gcctgcacgc gtttgcgccg
    28801 gcgctggacc aggaggcgct gcagccgtgg ctggatgcga tcgtggcgat ctgccgcggc
    28861 gacgccagcg ccgggccgat cgcgcagctg ccggcacgcg cgcgcttcca tttcctcacc
    28921 gccaagcgca gctcgatcgt gcagatgtcg agcacgcacg tgggtcgcac ggcggacccg
    28981 gccggtgtgg tcgaacacct gatgacgaag atggtgcggg tgccgcgctg atgcggccgt
    29041 ctctcacttc ttcgcgcgca ccctctgcca ggcaatgagc gcacaggctg ctgctgcagc
    29101 aatcaacatc cacccggcta ccgcctgtcc atgcaggtag ccttgtgcat acgcagcgct
    29161 ggcaccttcg ttggccatca ccgcgacacc cttgagtatc acctgcattc cgcgcagcag
    29221 gagcaccatg ctggcgacca gacataccac gggaaggaat cggctcatga accgattctg
    29281 gtccgccacc cgccccagcg tcaacatcgc tgcagcacag tcgctcgggc ctacagcggc
    29341 actcttcgcg cgatgtagtt gaccacgttg ccgatcgcat ccggatcgac attggccagg
    29401 ccaacgatca cacagccctg cgcgggcagc accacgatgg cactgttcga tccgggcgca
    29461 ccgccttcgt ggccgtactg gtgttccctg ccctcgccct gcaccacgaa gccgaatccg
    29521 taccagccct tgtgattctg cgccgtggtg gcctgttgca gcaatacagg tgagaccagc
    29581 tttccactac gcaatgcctc ggcaaacgcc accatgtcgc tcaccgtgct gtagccacca
    29641 ccggctgaca tgccacgcca gggcagcgac ttcgtttcac ggagccattg cccatccttc
    29701 ttcgtgtagg cgacggcacg ctgcggaacg ctcactgttt ccggctcgaa gccggtgccg
    29761 gtcataccgg ccgggcgcag gatgtggtcc tgcacataga cgtagtacga ctgccctgaa
    29821 accgcttcga tgatgcgccc cagtacgatg aagccatagt tcgagtagct gtcctggctg
    29881 ccaggcgcga actgcggcgc atccttggca aagcgctgca cgtagtcatc cagcgtcttc
    29941 agcgacgcag aatactgttc gaaatcatcg ccgaagaaat cacccaggcc actggtatgt
    30001 gacagcagat gacgtacggt cacgttgttg gcgacggcct tgttcggata gtccggcagg
    30061 tgctttccga tcgtgtcatc gagactgagc ttgccatcct gcaccagctg caggatggcc
    30121 actgcggtga acatcttgtt ggaggacgca aggcggaact gcgtatccac gcccactggg
    30181 atgccagcgg tgcgatcgga atcgccaccg cgccagtcca gcagcacctt gccgttctgt
    30241 accacctgca acgcccccga cagcgcgtcc cgcgcccgca gcgcctcgag ttttgccgcg
    30301 gcatcggcca tcaggacagg caaagccacc cgcgctggct tgtacttgtc cggcgtttca
    30361 gcgccctcaa tctggaactg cttcacgtgc gcaggattgg ccggatccat gacggccgtc
    30421 acccgcatcg cacgctcgtt caactggccc atcaccaaca gcttcgcctg gctggacgcg
    30481 ctctcgagtg tttccagaac gctcagcggg cctgtgctct cgcggaagtc gagatagtcc
    30541 ttgggagtgc tgccctcctg cttcgcatat ctgtcggcga atgcctgcag cccctcgagg
    30601 ctgcccgcat tgaaggccgc aagccagtca tcgatggcat tctgcgcacg tggatgcgca
    30661 tgctcgaaag aacttgcgcc aactaccgga gaagccgagg cggtcaccag gaccacgcag
    30721 gccagcgcat tgcagagaaa caggcgtcca aaagccctca ttacagttcc tttgcggatg
    30781 tccctggacg catcctagat gatggatcgg cccgccgcat ccactccagg gactctgccg
    30841 caacacatca acggtaacgt tgaatgcttc gatgcgctgc catccactgc gcgcgttggc
    30901 tggaaagcgc acaacacgtt gcggccctga agcggcgtga gggcgtgatc cttcacagta
    30961 gacaggaaca atgctgaccg atggccgcgc taccgccgcg ccatgctctg ctcgctgaac
    31021 cgcgccacgc agaaatccac gaagctgcgc agcttgggcg tcacctggcg gtcgcgcggg
    31081 tacagaagat ggatccaggt cgacaccggc tcgaacgtcg gcagcacttc caccagatca
    31141 ccacgtgcga gcgtcgccga gagcatttcg tagggctgca ggatcagtcc cagcccaccg
    31201 acggccgcag tcagcagcgg ctcggcctga ttgaccatga agcggctgga caccggcacg
    31261 gtcagcacgc tgccctcggc atcgcggaag ctccagcggg tgcggatgat tgaatgcgcg
    31321 aagcccaggc actcgtgacg gctcaggtca ttgggatggg taatggccgg gcgcgaagcc
    31381 agatagtccg gcgaggcaca caggaccagc ggatacggcc cgagccgtcg cgccaccagc
    31441 ccgctgtcgg ccaggtcgcc ggtacggaat accaggtcgt aaccgtcttc gacgatgttg
    31501 accaggctgt tggacaggtt cagatcgacc tgcacgtccg gatacgcctg catgtaggcc
    31561 accagcgccg ggcccagcgc atgcacgccg aaagtcaccg gtgcgctgat gcgcaggcgc
    31621 cccatcggcc gtccgcgtgc cacctctgcc agctgctcgg cgccctccac ttcttccagg
    31681 atcacccgcg cccgcgccag gtaggcctgg ccgaagtcgg tcaggctctg cttgcgcgtg
    31741 gtgcggttga gcaggcgcac gcccagatgc tgctccagcg cctggacgtg cttgccaacc
    31801 acctgcgggg acaggtccag cacctcggca gcggcggcga acgagccgac ctcggccact
    31861 tttgcgaagg ttcgcagggg agcaatcaag tccattgcaa acattccgtt ttcaattaaa
    31921 cacgagatta ccccttattc tgggtgcaga ctacgcgcac agtagccctc accctttcgc
    31981 cggcgccctc gtcggccctt tctcggagcc cccccccatg agccaggttg tccgcatcca
    32041 cgaatacggc aatgccgatg tactgcgcat cgacgacatc gacgttgccg cccccgccgc
    32101 cgacgaggtc cagatccgag tcaaggccat cggcctgaat cgcgccgagg tgatgttccg
    32161 caatggtgcc tacctgcagg aagcgcagtt ccccagccgc ctgggctacg aagcggccgg
    32221 cgtggttgaa gccatcggca gtgcggtgag cggcttcgct gcaggcgatg cggtcagcgt
    32281 gataccgccg ctggatatcg cacgctgggg cacctatggc gagctggcca acgtgccggc
    32341 gcgactggtg gtcaaacatc cgcagacact ggactttgaa acggctgccg cagtgtggat
    32401 gcagtacgtc acagcctggg gcgcactgct ggaacaggcg caactgaccg cgggggattt
    32461 cgtcatcatc accgccgcca gcagcagcgt cggcctggcc gcgatccaga tcgccaatgc
    32521 cgtaggcgcc acgcccatcg cggtcacgcg tggcccgggc aagcgccagg ccctgctcga
    32581 tgccggtgcc gcccatgtca tcgccaccga ggaacaggat ctggtggccg aagtagcgcg
    32641 catcaccaat ggcgccggtg cccgcgtggt gttcgatccg atcggtggcc cgcagttcgt
    32701 gccgctgacc gaagcgatgg cgcgcggcgg catcctgctg gagtacggcg cgctgagcag
    32761 cgaacccacg ccgttcccgt tgttcaacgt actgggcaag tcgctgaccc tgaagggtta
    32821 cctgtattcg gaaatcgtct ccgacgatgc cgcactggcc cgggccaagg cgttcatcgt
    32881 caatggcctg gacaagggca cgctggcgcc gaagatcgcc agggtgttcc cgttcgcgca
    32941 gatccaggac gcacaccgtt acttggaatc gaacgagcag atcggcaagg tggtagtgac
    33001 ggtttgatcg atcatcaggg agcgcgggcg gcgaccggcc gccccggttc cggcagcgca
    33061 taggccatca cgtaatcgcc cttcggggtt tccatgaaat ggtgtccgcc cgccacgatc
    33121 accacgtact gacggccatc ctgttcgtac accatcgggt tggcctgccc gcccgccggc
    33181 agcgtggtat gccacaactc cttgccgctc ttcagatcga tggcgcgcaa caggtcatcg
    33241 gtggccgcgg caatgaagat caggccgctg gcggtcacca ccgaaccgcc gttgttgggc
    33301 gtgccaatct cgatcggcag gcccgaacgg atgccgaatg gtccattgcc acgggcactg
    33361 ccgaacgggc ggtcccacag cagcttgccg gtgcgcaggt cgatggcccg gatgccgcca
    33421 tacggcggct gcttgcacag caagccggtg aacggcagcc gccagccggc attgacctgg
    33481 atggcgtacg gcgtgcctac ctgcgggtcg cccgcgcctt cggcgccgcc cttgtcgaac
    33541 cggatcttct cgcgcggaag ccagcccagc cggtcggcct cggcacgcgg caccagccgg
    33601 ttgtagttgg gcatgtcgtt gtagttggcc acgaccacgc cgcgacgggt atcgatggac
    33661 acgctgcccc agtccgagcc gccgttgtag ccggggtact cgatggaatg acgatcactg
    33721 ctcggcggcg tatagaagcc ttcgtagtac gccttgcgga actggatgcg gcagaccagc
    33781 tggtcgatcg gggtcagccc ccacatgtcg cgctcggtca gctcatgctc gcggcgcagc
    33841 gtgtggtaca gcgagaacag ctgggtgggt gagcgctgtt cgggctcgac accgccgatg
    33901 ggcaccttgc gctcttcagc ggcgctcagc agctggccgt tgcggcggtc gaggatgtag
    33961 atgtcgccct gcttggtcgg cagcaggatc gccggcacct tgccggcagc cgtcggatag
    34021 tcgatcaggc tggcctgcga gcccaggtcg tagtcccaga catccttgcg caccgcctgg
    34081 aaatgccagg ccggcttgcc ggtagccaca tcgatggcca ccagcgaggt cgcgtagcgg
    34141 ttctggtttt ccgtgcgcga gccactccag tagtcaccgg cggaattgcc cagcggcagg
    34201 tagaccagcc ccaatgcctc gtcaccggtg gccgtggtcc acatgttcgg cgtaccacgc
    34261 gtataggtct gttcgcgcgg aggcaggccg ctacgctcgg gctggtccat gtcccacgcc
    34321 cagcgcagct tgccggtgat cgcgtcgtag gcctggatca caccggacgg tgcatcgcga
    34381 cgctgcccgt ccagcacctg gtggccggtg acgatcaccc cgcgcacgat ggccggcggc
    34441 gaagtgatcg acacgtatcc cggcggtacc tcgcccatgc ccagggtgat gtcgacctgt
    34501 ccgttgttgc cgaagttggc gcagggtcgg ccgctgccgg catccaccgc gatgaggcgg
    34561 ccgtccagcg tgccttcgat gatgcgcgcc cagcaggccg gatggctgcc cggcgcagca
    34621 ctccgggtca cgctgggcgg tggctccggc agtgccagat cggcagcgac atccgccagt
    34681 gccgcatcgg ccagggtcgg tgcgctcggt tgctcgtagt aactcacacc gcggcaggcg
    34741 gcggtgtacg ggatcgaggc atccttcact ttgggatcga accgccacag ctccttgccg
    34801 ctggcggcat caagcgcgat cagccggttg cgggcggtgc acaggtacag gcggtcgccg
    34861 atcttcagcg gcgtggtttc cgcgccccag cgcttcttgg gcaggtcacc ggtccggaac
    34921 tgccaggcca gctgcagcgt gccgacgttg gccggcgtga tctgctgcag cggcgagtaa
    34981 cgggtggcgg cgttgctgcg gccccacgcc ggccaatcac cgtcggcagg ctggtcggcc
    35041 ggctgcaggc cggtggtgtc ccgggtcggc tccaggccgg cactggctgc accttccggg
    35101 aaaggctgat gcccatccac ttcgccatga ggcgcaaacg ccaggccgaa ggccgccacg
    35161 aacaccagca tcagcacgcc ggcgacgctg cgcgacaggc gcctggagac gggttggtgg
    35221 agggtcggcg ccagcagcgc cagcacgatg cccagcgcgg ttaccaggcc cagacgcggc
    35281 acccagcgcc agtaatcact gcccgattcc caccaggtcc acagcagcgt gccgaggaac
    35341 accaacgcgt acagcagcgc accgctgcgg cggttgccga acaacaggat gccgctggcc
    35401 agcaggccga acccggcgat cgcatagtag gccgagccac cgaggctgag cagccacgcg
    35461 ccgagcccgc cgatgaccag gccgagcacg accagcagca gcgacagcac ggtgaccaga
    35521 gggtggcggg aggaaggagc ggaggcagac tgcggcgtgg cggacatcgt cgatctccgg
    35581 ggcagcatgc gcccttatcc caccgccgac gtgaagcgcg cgcgtatatg cggcatc
//
LOCUS       DAOKIP010000019        35236 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.019,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000019 DAOKIP010000000
VERSION     DAOKIP010000019.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 35236)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 35236)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..35236
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.019"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(34..1668)
                     /locus_tag="QEL58_000867"
     CDS             complement(34..1668)
                     /locus_tag="QEL58_000867"
                     /EC_number="6.3.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014038260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD+ synthase"
                     /protein_id="HDS1675370.1"
                     /translation="MASIRIAMAQFDFPVGDVAGNTERIIEMIGQARDEYGAELVMFP
                     ELAVSGYPPEDLLLRPGFLYECEQAMGRIAAACRGVTAVVGWPQAAGAVVYNAASVLR
                     DGLVEQTYRKRELPNYAVFDERRYFDVDPDGGSCVFEVNGVPVGLLICEDLWFAEPLA
                     DTVRAGAQLVVVPNASPYERGKHAQRDAVLAARTRESGAAIAYLNVVGGQDALVFDGA
                     SVVADGDGTVHPAAAAFVDQWLVVDYDGQSRRFLPHVWMDDGDESMDALAWRAVTRGI
                     QDYCRKNGFKKVWLGLSGGIDSALVLALAVDAMGAENVTAVRLPSRYTAGLSNDLAAE
                     QCQALGVKLEAVSIEPAFKGLMESLAPMFDGTTPDVTEENLQSRSRGVILMALANKFG
                     GLLLTTGNKSEYAVGYATIYGDMCGGYAPLKDLYKTEVFGLSKWRNTVGGAPVIPPAV
                     ISRPPSAELRENQLDQDSLPAYDVLDGILYRYIDQEQSRGEIVAAGYDAAVVDRVLRL
                     VRISEWKRHQAAPGPKVSRRAFGRERRYPISNGYKG"
     gene            complement(1875..2750)
                     /gene="sucD"
                     /locus_tag="QEL58_000868"
     CDS             complement(1875..2750)
                     /gene="sucD"
                     /locus_tag="QEL58_000868"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002812253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate--CoA ligase subunit alpha"
                     /protein_id="HDS1675371.1"
                     /translation="MSVLINKNTKVIVQGFTGQQGTFHATQMIEYGTQVVGGVTPGKG
                     GTTHIDLPVFNTVADAVQSTGANASVIYVPPPYAADAILEAAAAGIKVIVCITEGIPV
                     LDMLRVKNVLTRSHPDTVLIGPNCPGVITPGECKIGIMPGHIHQPGKIGIVSRSGTLT
                     YEAVKQTTEVGLGQSTCIGIGGDPINGLNFVDCLKLFNEDPQTEGIIMVGEIGGDAEE
                     AGAEYIKNHVKKPVVGFIAGASAPAGKRMGHAGAIASGGKGTAEGKFAAMEAAGVVTV
                     RSPGDLGAAIAKLVK"
     gene            complement(2772..3941)
                     /gene="sucC"
                     /locus_tag="QEL58_000869"
     CDS             complement(2772..3941)
                     /gene="sucC"
                     /locus_tag="QEL58_000869"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019183942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-forming succinate--CoA ligase subunit beta"
                     /protein_id="HDS1675372.1"
                     /translation="MNFHEYQSKQLLAEYGIPVPAGKVAATPDEAVAAANSLGQGPWM
                     VKAQIHAGGRGKAGGVKFCKTTDDVKAAAAKMLGTKMATYQTAGVELPVNLVLVTTAG
                     EIVKELYLSVLVDRGTKTITYIASSEGGVEIEQVAAETPELIHSLNVDFVEGVQGYHG
                     RDFGFKLGLTAKQAGQFASIMVNLYRLFNEKDLALVEINPLAILDDGNLYALDGKFDS
                     DDNAAFRQKALVAMRDKTQEDPTEVIASELDINYVTMDGNIGCMVNGAGLAMATMDVI
                     KLNGGEPANFLDVGGGANKQRVIEAFKLILSSDKVEGIFVNIFGGIVRCDMIAEGIIA
                     AVKEVGVKVPVVVRLEGTNVEEGKQLLRDSGMAIIPADNINDGAKKIVEAVKNAA"
     gene            4347..5960
                     /locus_tag="QEL58_000870"
     CDS             4347..5960
                     /locus_tag="QEL58_000870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HDS1675373.1"
                     /translation="MSPSASLIDRIESIPRRELYFFALYRVLIATVIAALLYSPLSGL
                     VGEAHHPRLADVVAVIYLALSLLALVIGRNERWLRPIVVSGVLVDIVAATLLSHALPG
                     ASAGISMSLLFNIAAAATLLPLSLGLGLALAASLATGVEYTWKLLEGGDPTRTLAELA
                     MFTTSYLALAFISYQVGNRARRNQQLANQRGDEVANLFQINELIIRRMRTGVLVVDAD
                     NRITLANEAASMLLGDNDGNGESGRLDLASAAPELTRRLQRWRNGWAQDELPLQLNPD
                     QPEVQPRFARLLAGSDLALVFLDDSSVVSRRAESLTLSAMGRFSASLAHEIRNPLAAI
                     NYAVQLLEEGTGFNESDRRLLQIIRQQCQRTNGIVESVLGLARRERATPENVDLAAFV
                     RRFVLEYKQGQTLETDSIEPIINDSAVMAQVDTRHLYQVLTVLVHNALKYGRIGQQPA
                     RVRLRVAQHERSAVIDVMDRGPGIPESVAAQLFRPFFTTSEHGTGLGLYIARELCRAN
                     QARLDYIPVPAGGSCFRLVLPGPHTLLPT"
     gene            6021..7394
                     /locus_tag="QEL58_000871"
     CDS             6021..7394
                     /locus_tag="QEL58_000871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006387002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54-dependent Fis family transcriptional
                     regulator"
                     /protein_id="HDS1675374.1"
                     /translation="MNETRSALVVDDERDIRELLVLTLGRMGLRISTAANLAEARELL
                     ASNPYDLCITDMRLPDGNGIELVSEIAQHYPRTPVAMITAFGSMDLAVEALKAGAFDF
                     VSKPVDISVLRGLVKHALELNNTERPTPGPSAEQGARLLGDSPAMDVLRTTIGKVARS
                     QAPVYILGESGVGKELVARTIHAQGARAAGPFVPVNCGAIPGELMESEFFGHRKGSFS
                     GAHADKPGLFQAAHGGTLFLDEVAELPLQMQVKLLRAIQEKSVRAVGAPNEEPVDVRI
                     LSATHRDLAELVEDGRFRHDLYYRINVIELKVPPLRERRQDLPELAAAVLARLARSHG
                     RATPLLAPSALEALAQYAFPGNVRELENILERALALAEEDCIGADDLRLPQHAPRAPG
                     SAAPAEAVADLQPGSAALPSYIEQLERSAIQRALEENRWNKTRTAAQLGITFRALRYK
                     LKKLGME"
     gene            complement(7502..9232)
                     /gene="pilB"
                     /locus_tag="QEL58_000872"
     CDS             complement(7502..9232)
                     /gene="pilB"
                     /locus_tag="QEL58_000872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV-A pilus assembly ATPase PilB"
                     /protein_id="HDS1675375.1"
                     /translation="MNTATTANLVGITGLARRLVQDGALDEAGARDAMAKAAAARQPL
                     PTWFAQNRVVGAAQLAAANAVEFGMPLFDVSTFDANQNAMSLVSEELLRKHNVLPLFK
                     RGGKLFVGTSNPTHSLDEIKFHTNLVVEPILVDEDQIRRTLEQWHASHDTLGDALGGD
                     DEGMGNLEVSAGDEDLGTGGDSGIDAKGDDTPVVKFVNKVLVDAIRKGASDIHFEPYE
                     DDYRVRLRIDGLLKMVARAPVKLNQRIAARLKVMAQLDIAEKRVPQDGRIKLNLSKTK
                     QIDFRVSTLPTLFGEKVVLRILDGSAAKLGIDKLGYEPDQQKLFQDAIHKPYGMVLVT
                     GPTGSGKTVSLYTALGILNDETRNISTAEDPVEIRLPGVNQVQQNNKRGMTFAAALRS
                     FLRQDPDIIMVGEIRDLETAEIAIKAAQTGHMVLSTLHTNDAPQTIARLMNMGIAPYN
                     ITSSVTLVIAQRLARRLCGNCKRLATLPEHALLAEGFTQAQLDAGIQLYEAVGCDECT
                     EGYKGRTGIYQVMPMTDEIATIVLAGGNALQIAEAAQQIGVNDLRQSALKKAAAGITS
                     LAEINRVTKD"
     gene            complement(9297..11411)
                     /locus_tag="QEL58_000873"
     CDS             complement(9297..11411)
                     /locus_tag="QEL58_000873"
                     /inference="COORDINATES: protein motif:HMM:NF013080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HDS1675376.1"
                     /translation="MKGIAVRQYVAAAVMGVILLGQQVHQIADRFGNEGLHARTDLMQ
                     QFATELLEERGFAAKITLFVLFAIGSHLLLTVGGMWVYRRACSQLLPKRRDAFWRSLL
                     FVSVVVLLAMFANRWLYPQSASFVDAELLMIQWLSPLLVGACIAVVAIAVLSTLYSLL
                     RSRRNLFAAGSLLALAVCLGAWGWNGGVREGMGENRPDVIILGVDSLRPDYLASYGEF
                     PGGLAPAIERTLAGSVVMDDVRTPLARTFVSYNSTLTGMNPLKHGARFNLYPRSEFSR
                     DQNLAWDLKRQGYFTMLAMDESRFANFDQSFGFDRTVVPTVGGLDFVVGGSFDFFATN
                     LLLAALPASEPLSVVQGNRAAYRSYRTADHPARLIGELRDAPADAPLFLVSHLCLPHW
                     PYLPGGIREDRSLDWVGKVKGYEDSQSQYLNAIRAVDGQFEALIDELRRLRRLDNAIL
                     VVMSDHGEDFAMRRDQFNDNDANQAVGAYGHGSFALSDVQNHVVMAIQQFRNGQPVWT
                     HRRVAGPGSVIDVAPTIAELVGLRRDRYEGLSWLPVIRQNKDLPGNRVRFMENGLRST
                     GVERAHINEGQVAQEMSYLYRLTEDGRFEVRPDLLPEKLREKQRGAILGRWGVMTDPA
                     SGNAPGARHCWRVVDYERRTIACTPYPAPEPAIADLQREVCEYYREDGDFHAAWCASA
                     DRADGRRPAGPSAGVERQTGNM"
     gene            complement(11514..11930)
                     /locus_tag="QEL58_000874"
     CDS             complement(11514..11930)
                     /locus_tag="QEL58_000874"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011038214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilin"
                     /protein_id="HDS1675377.1"
                     /translation="MKNQKGFTLIELMIVVAIIAILAAIALPAYQDYTVRSRVSEGAV
                     LASGAKATVGENIANAGGTIDDTACNGVATFTTATKNTAKLECASGVITVTGTAAAKN
                     VALQFEPKSASAGITWTCTSTADNKYLPAECRKAAP"
     gene            12286..13545
                     /locus_tag="QEL58_000875"
     CDS             12286..13545
                     /locus_tag="QEL58_000875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005414309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HDS1675378.1"
                     /translation="MSVSRSAIKKEPVARSTMELQPFVWEGTDKRGVKMKGEQLAKNA
                     NLLRAELRRQGINPGQVKPKPKPLFGAAGKAVNAKDIAFFSRQMATMMKSGVPIVSAL
                     DIIASGHKNPRMKKMVDGIRTDIEGGSSLHEAVSKYPVQFDELYRNLVKAGEGAGVLE
                     TVLDTVATYKENIEALKGKIKKALFYPVMVVVVALLVSAIMLIFVVPQFEEVFHGFGA
                     ELPAFTQMIVNLSRFMVSWWWLIAAVVIGAVVALVMSYKRSLKMQHTMDRLILKVPVI
                     GEVMNNSAIARFARTTAVTFKAGVPLVEALGIVAGATGNKIYEEAVLRMRDDVSVGYP
                     VNMAMKQLNLFPHMVIQMTGIGEEAGALDAMLFKVAEYYEQEVNNAVDALSSLLEPMI
                     MVFIGVVVGGMVIGMYLPIFKLGAVVG"
     gene            13553..14416
                     /locus_tag="QEL58_000876"
     CDS             13553..14416
                     /locus_tag="QEL58_000876"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019302544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase"
                     /protein_id="HDS1675379.1"
                     /translation="MAFLDQHPGLGYPAAAALGLLLGSFLNVVILRLPKRLEWQWKRD
                     AREVLEEPDYYEPPPPGIVVEPSHCPHCKHKLSWYENIPLFSWIIQGGKCRHCKAPIS
                     LQYPLVEAMTSLLVLACVWQFGFGWQGFGAIVLTCFLIALSGIDLRTQLLPDQLTLPL
                     MWLGLIGSIDNLYMPAKPALIGAALGYLSLWAVWWLFKQLTGKEGMGHGDFKLLAALG
                     AWCGLKGILPIILLSSVLGAIIGSIWLYSRGRDRATPIPFGPYLAIAGWLYFMWGEPL
                     VEQYLVLSGLR"
     gene            14428..15039
                     /locus_tag="QEL58_000877"
     CDS             14428..15039
                     /locus_tag="QEL58_000877"
                     /EC_number="2.7.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013534337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dephospho-CoA kinase"
                     /protein_id="HDS1675380.1"
                     /translation="MSRYVVGLTGGIAAGKSEVTRRFEALGIVVADADLAARAVVAAG
                     SPALGRIAERFGADMLLADGSLDRARLRAHVFADPAERVALEAITHPAIRLLMQQQCE
                     QATSPYAIAAIPLLTEVGGRQAYPWLDRVLLVDAPEAVQHARLMQRDGIDAALADRMI
                     AAQASRAQRLALADDVVVNDGQPQDLQVQVEQLHARYIAAAAE"
     gene            15358..15816
                     /locus_tag="QEL58_000878"
     CDS             15358..15816
                     /locus_tag="QEL58_000878"
                     /inference="COORDINATES: protein motif:HMM:NF013003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pentapeptide repeat-containing protein"
                     /protein_id="HDS1675381.1"
                     /translation="MKEIKDLSGNVIFTVPPTSGILDLDSAMLANANLDGAELEGAIL
                     MQTCLSGASLIGADLYWAILFMADLTDANLQHADLRGADLQDAILRGANLSGANLGRD
                     NLGGSTQLEGADLSTSVLDGAILTGALYDDKTLFPPGFLPEERGLLKSSG"
     gene            complement(16012..16398)
                     /locus_tag="QEL58_000879"
     CDS             complement(16012..16398)
                     /locus_tag="QEL58_000879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005418641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675382.1"
                     /translation="MSARPEFPHLSALIGDAVNRLPAHAAERLEALLDDPEDLLPTLL
                     ARMDGHDGPDGRRCDAQGLSPAQAATRAGLGRTLAGLDVLVQVLHAAAAAREQGGAHQ
                     QLSPDVVDGLLLGARELVRHARLQLE"
     gene            complement(16815..18980)
                     /locus_tag="QEL58_000880"
     CDS             complement(16815..18980)
                     /locus_tag="QEL58_000880"
                     /inference="COORDINATES: protein motif:HMM:NF021508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2235 domain-containing protein"
                     /protein_id="HDS1675383.1"
                     /translation="MKVSSSAPLDENSIGLSAREKSRCAGSSIGTISPCGIDIFIGCF
                     FDGTRNHRLNSLRRGDFTQSNISRLFDVFDRGILPGTGVRRSQFSSYIQGVGTEALKE
                     IGDTGTGWHARAGAAAGWGGEGRVNWMLMQVQDHLLTHFAETTVTAAMGFDSTAPIAR
                     RMSADLRLHLQDVERLAQAARMSLSNYLAVNQGQEEIDLRNSLSGGFWNMVGALQRVR
                     GTHLARADHISRRAVLQERRAFLAKKVAPFQKQNPRVDRIRISVFGFSRGATEARVFC
                     NWLGDACDPGPGPLRLCGIPVQIDFVGLFDTVASVGAAQSFFESMFDGHGGWASAEDL
                     RIPADVRRCVHMLAAHEVRGSFPVDLVDGANCEQIIYPGVHSDVGGGYTPGEQGRSPK
                     DADKLSQIPLCDMYRHALAAGVPLLPMDEADKETAAQFEVSPKLRQHYNAYLQAMAPF
                     LPASTPAAKANRTAVLMYAHYRQYLLWRRQHLDDFDRQPGYLQAPAQDRADLGGGNAE
                     LVQEARAMRYNNATARLRTEEPFAAHHGMATPPRFQGIPVQDFVQARLRGKKEQQWLD
                     GQIQSIWDSRQAPPQAVAAFLDGYVHDSRAWFKPFGLDDDEWVHVQRREREAYQQRMR
                     ELDAIERSHRQERERIQRSGQMFQPRVPLGMSVQELEALTDWRQRPDDFDEALQLTGR
                     EYHWQWGYLRWRTCYLNPPGETVAEASARRSQRAEEAAA"
     gene            complement(18986..19603)
                     /locus_tag="QEL58_000881"
     CDS             complement(18986..19603)
                     /locus_tag="QEL58_000881"
                     /inference="COORDINATES: protein motif:HMM:NF023173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3304 domain-containing protein"
                     /protein_id="HDS1675384.1"
                     /translation="MKGVERMAVVKKVFVRIALIGLAMFALAGLALKFMDFRMGPPPP
                     GPPKPRIIDSVSGHDITDAPPEMSLTIGVANYSDDGLGTVFINDAWAGAMRARASGNA
                     ATCCVTLPRLWHPGLKVTVAYRTSSMFLKDPRSYVEKNVLVAPYKPFLDGFIYFMYFP
                     DDQVRVVATPYFPGYPKFAYDIDHAELERDPERISRFLIDSDGEE"
     gene            complement(19604..20629)
                     /locus_tag="QEL58_000882"
     CDS             complement(19604..20629)
                     /locus_tag="QEL58_000882"
                     /inference="COORDINATES: protein motif:HMM:NF021508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2235 domain-containing protein"
                     /protein_id="HDS1675385.1"
                     /translation="MGCFFDGTRNHRLASKKRKDMSESNVSRLFDVYDLGRAKGIGRR
                     PTNFASYIQGVGTEALREIGDTGTGWHARAGAAAGWGGEGRVNWMLMKVQDHLLTHFA
                     ETTVTTAMGFDSTVPIARKMSADLRLHLQDVERLAQAARMSLSNYLAVNQGQEEIDLR
                     NSLSGGFWNMVGALQRVRGTHLARADHIARRAVLQERRAFLAKKVAPFQKQNPRVDRI
                     RISVFGFSRGATEARVFCNWLGDACDPGPGPLRLCGIPVQIDFVGLFDTVASVGAAQS
                     FFESVFDGHGGWATAEDLRIPADVRRCVHMVAAHEVRGSFPVDLVDGANCEQIIYPNL
                     RRRRGCV"
     gene            complement(20746..21372)
                     /locus_tag="QEL58_000883"
     CDS             complement(20746..21372)
                     /locus_tag="QEL58_000883"
                     /inference="COORDINATES: protein motif:HMM:NF023173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3304 domain-containing protein"
                     /protein_id="HDS1675386.1"
                     /translation="MKGVERMAVVKKVFVRIALIGLALFALAGLVLKFMEFRMGPPPP
                     SPPKPRIIDAASGHDITDAPSEMHLMIGIANYSDEGLGKVFINDAWGGAMRARASSNG
                     RTCCVTLPRLWHPGLKVTVAYRTSSMFLKDPHSYIEKEIFVPRYKPFLDGFIFFMYFP
                     DDEVRVIATPYFPGFPKFAYDLDFADSERDPEKINGFLEVTARGGVTE"
     gene            complement(21644..22033)
                     /locus_tag="QEL58_000884"
     CDS             complement(21644..22033)
                     /locus_tag="QEL58_000884"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675387.1"
                     /translation="MRVAVSPPASDSSASLSHRELARNEGANVESSSDCGAGIFIGCF
                     FDGARNHRLNYHRLGNKTESNISRLFEIFNRDFFCFPGYQVRVTATSYSPGYPGFAYD
                     IDFGDGHDDLAKIKRFLEATAGKEAEW"
     gene            complement(22030..22629)
                     /locus_tag="QEL58_000885"
     CDS             complement(22030..22629)
                     /locus_tag="QEL58_000885"
                     /inference="COORDINATES: protein motif:HMM:NF023173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3304 domain-containing protein"
                     /protein_id="HDS1675388.1"
                     /translation="MKKFLTRVILIGLALFALAGLVLKFMDFRIGPLPPGPPKPRIIE
                     PDTGHDITDAPLEMSLRIGVANYSDDGLGTVFINDAWAGGMEPRASGNAATCCVALPR
                     LWHPGLKVTVVYRTSSMFLRDPQSYVERDILVAPYGPFLDGFIYFFYFPGDQVRVVAT
                     PYTPGYPGFAYDIQFAGCERDEAKIARFLMETAAEEVVQ"
     gene            complement(22626..23441)
                     /locus_tag="QEL58_000886"
     CDS             complement(22626..23441)
                     /locus_tag="QEL58_000886"
                     /inference="COORDINATES: protein motif:HMM:NF024894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4123 domain-containing protein"
                     /protein_id="HDS1675389.1"
                     /translation="MADAPWIDPWRHSRLPWQTPGDQCVDARPACALLDMAFAPDAWT
                     QLRALAADVVPLFTHRYTGKGLDRLSPCLVVLPGEARARERCWQALLDLSRGAPMLSV
                     LRSTGDPHALAEHLRRIWEGRSSTDQPWLLRWADGRAAARLLDALDDAQRTRVLGGLH
                     DWHLPTRIGDWMCVTGKGGVPLDTDARPLTFTAAQEATLRSGSQADAITRFILQRPVL
                     RPDGMLPSQVHRCAEHVLERLARRGIDHPALAHRMTIKEVAVRNGRHGEDETP"
     gene            complement(23434..26043)
                     /gene="tssI"
                     /locus_tag="QEL58_000887"
     CDS             complement(23434..26043)
                     /gene="tssI"
                     /locus_tag="QEL58_000887"
                     /inference="COORDINATES: protein
                     motif:HMM:NF021611.1,HMM:NF024692.1,HMM:TIGR03361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system tip protein VgrG"
                     /protein_id="HDS1675390.1"
                     /translation="MDHRSSFVAAHEASSRVHRFCGPTALRLIVERWHGSESLSEGLR
                     CQIDLLGEPCEHSLDDWVARPASITTRLPDGADVVRGGLIRSVERLACAGRLVRYRVH
                     LADWTAWLHDSRHSRVFQDQDVASIISTVLSVHAPLAHWSWHVGSTAAIDRRCRGYRV
                     QYRQSDMAFLQQLMADEGLGWCIRTLPDVPGGHTMMIFGDSTRCSLLSRPRRLHQTQR
                     VPDDAGIALLHETCRVVPTHMTRVADLDDPLRVVSASLPVRTVASGPLEDYSPARHAA
                     WETSREALAEVMRDTEAALCEQRRWTGEGTEPDFQPGYAFEVLPEPGQRAVPALLLTA
                     VQHAAVNTLPEVLELQQHLPLHALPDTVPADSAQRLGYANRFEAMPFDRRWRRSPDGR
                     AGRSTAPGPQLATVLGGDDGAPLYMDSNGRIRVQFGFATDSRADSGWLRVAQTFAGPG
                     GGSQFLPRVGQEVVVDFINGDLCRPIVMGALYNGRGESRAEALALSSDAGSSAQNNLA
                     GGNAPRWHAAGAGESAQRNAGAVWGISSQSWDGHGGNSLEFDDSDDQLQVRLGTTQCH
                     SAISMGHLRHLQHNFRGSLRGSGFELRSDAWGAVRATAGLWLDSMQRSASTPAGLRAA
                     PVALLRQTLVLAHSFDEAARQQRTVRLRGHAAGGNGASVLQALADSVAASQRLQGADE
                     DIPATGSAVLGLSAPAGICQVAGQAIQLGVGHSTLLASGGSSSVTVAGHGRWQCRQAI
                     GVLAGATRNPGSAGLSVVAGQQVLDMQAQADAVHLQARAGLVAASQHGEVQLAAGNTL
                     HIATAGGASITLADGHLRMSCPGTLTIKAGNRHFTGPVQELFPLPQFAQTVCVECLLK
                     AMQAGLPWSTKNG"
     gene            complement(26276..26680)
                     /locus_tag="QEL58_000888"
     CDS             complement(26276..26680)
                     /locus_tag="QEL58_000888"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675391.1"
                     /translation="MSYRTHYPNLYQLVGESIRQLSVEIAQRVEDVLSGPDGLMRMLK
                     GQMDIDGSTQRTGLSAPEAGTLAGIRHTVAGITSLTRMMYAVHVARTRGGPSQVVPPD
                     AMNGLLLAARELTSHAQRQLRAERNRGSATLQ"
     gene            complement(26945..28315)
                     /locus_tag="QEL58_000889"
     CDS             complement(26945..28315)
                     /locus_tag="QEL58_000889"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012481104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing histidine kinase"
                     /protein_id="HDS1675392.1"
                     /translation="MASDTASLPRKPDSVAAKGERRRTPYRRRLRSRIIVSFVLLGFC
                     LTTLFAFATNWARMRVENQLVEDVINHNIEEYARRFYEHPGRNPAVPVQQIRAYAYSA
                     DKFDKARESWPQWADLQTGNYNLSGTDEQGQPYAYKLAVRKSDDAWFFLAYDMTDSVR
                     GGKQLNRALVLSVLVFSVLSLVLGWWSASKVMKPVSDLAARLRAYRGGTSDPEPLAPR
                     FPDDEVGQLAQALDDYSSRLTEVVQRDREFNADVSHELRTPLAVIRGATELLLTRPGL
                     DEKVLQRLQRIQRAEQQCSDLIGALLLLSRNERGQGTSNVARVAEQLLDAHRAQLGGK
                     PLELALEGERDLVIDAPEAALSVALGNLIGNAVKYSQDGEVRVHVGANAVSVTDSGPG
                     LSEEDAAKLFQRGYRGTHAGHSQGGGIGLSIVSRLCDLYGWQVSVRPGGERGVIATLT
                     FSPKPL"
     gene            complement(28278..28955)
                     /locus_tag="QEL58_000890"
     CDS             complement(28278..28955)
                     /locus_tag="QEL58_000890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017169438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDS1675393.1"
                     /translation="MRILVIEDNSDIAANLGDYLEDRGHTVDFAADGVTGLHLAVVHE
                     FDAIVLDLNLPGMDGIEVCRKLRNEARKQTPVLMLTARDSLDNKLAGFDSGADDYLIK
                     PFALQEVEVRLNALSRRGKGVQTRVLETGDLEYNLDTLEVRRQGKLLQLNPTALKILQ
                     ALMEAAPAVVTRQELETRVWGEELPDSDSLRVHIHGLRAVVDKPFEVPLIQTRHGIGY
                     RIATPEA"
     gene            complement(28964..29437)
                     /locus_tag="QEL58_000891"
     CDS             complement(28964..29437)
                     /locus_tag="QEL58_000891"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019336437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675394.1"
                     /translation="MKSLLMSAVLFSGLTLATVASASKESSEVFLPGKPLQQQIERIE
                     IQLNDGETYSELKQSDRSRVREALVRMRTAVEQHPNRDSMPEQVRTDIFNDQQIVNTV
                     LTQAREDSRLICQREKVTGSNRSTTQCSTVAERARQKDRAQRDMSQAQRTGKFVN"
     gene            complement(29527..30003)
                     /locus_tag="QEL58_000892"
     CDS             complement(29527..30003)
                     /locus_tag="QEL58_000892"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675395.1"
                     /translation="MYRVTMIALLLGLAGTAVAKPEKAVVQMDRQMPVAEQVRKVEKA
                     LDDGDYSEISADDRAQVRQALARITQRMGDRQTLQELPPQVQNDVFNDQERVNTLLAR
                     AHDDSRQVCQYTRTTGSNMPKSRCMTVAERRRIEEKGKALLHDQRTFTDLSPPGNR"
     gene            complement(30250..31128)
                     /gene="rimK"
                     /locus_tag="QEL58_000893"
     CDS             complement(30250..31128)
                     /gene="rimK"
                     /locus_tag="QEL58_000893"
                     /EC_number="6.3.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006387331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S6--L-glutamate ligase"
                     /protein_id="HDS1675396.1"
                     /translation="MKLAILSRNSSLYSTRRLVEAARARGHTVRILDPLRCYMRIAAD
                     GFSMHYKGRPMTGVDMVIPRIGASITRYGTAVLRQFELMGARTPNPSDAILRSRDKLR
                     AHQLLAAKGIDMPVTVFGDNPDDTVDLLSMLGPPPHVVKLNEGTQGRGVILTEKASAS
                     RGIVEALRGLYANFLMQEFIGEAKGADLRCFVVGDQVVASMQRQAPEGDFRSNLHAGG
                     TAVAAKASRAEQQVAVRSAKALGLSVCGVDLIRSARGPLVLEVNSTPGLEGIEAACGV
                     DVATRIIDHVEKLKKP"
     gene            31300..31659
                     /locus_tag="QEL58_000894"
     CDS             31300..31659
                     /locus_tag="QEL58_000894"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675397.1"
                     /translation="MGIPLLLLFGLAGGATEVHAAPTHAVSRLYFDASNTLIGQSLRY
                     CTGRTQHQGAASHTNTRWIDVTYACNGDSTEVSYGGWVPADLRQDFCGLYDACTLLMP
                     WPEHTLPGPLAPGFNSD"
     gene            complement(31646..32596)
                     /locus_tag="QEL58_000895"
     CDS             complement(31646..32596)
                     /locus_tag="QEL58_000895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675398.1"
                     /translation="MRASSRWNAFLLAPVLALATTACTDSTAPSEAGHAARTASATVI
                     PATGVANSGMAATGNAPAAYQKYYTARNVQPLMADLEFLSRSGDANASFVLSRIHDDC
                     AVIPDWGSLAGLDIAQEKKVALQRSTAWFKARCEGMPEDVVSGFRNLKRYRELAVNQG
                     SLAAQIEQAAPGLHLADQDLSVEDHKTFVEAVLMQDDGEAYMALAATMGEAASHRIDA
                     LKPYKAGTAVEEAAWMLAGCRKGVPCGADSPILQRMCRAGVCGYNSLEELYSHGMLAP
                     EQMQQARARMEEIIALSKGVSGNDGSIAGDVVAGRPVSRN"
     gene            complement(32743..32816)
                     /locus_tag="QEL58_000896"
     tRNA            complement(32743..32816)
                     /locus_tag="QEL58_000896"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(32782..32784),aa:Gly,seq:ccc)
     gene            complement(32947..34782)
                     /locus_tag="QEL58_000897"
     CDS             complement(32947..34782)
                     /locus_tag="QEL58_000897"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014648212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter domain-containing protein"
                     /protein_id="HDS1675399.1"
                     /translation="MLLSKRPIRSLMAAAIALAAVPAMAGESPYTHAVFFGDSLTDAG
                     YFRPLLPPGVQPVTGQFTTNPGWVWSQQLANYYGLNGAANGNGQNGDNYAVGGARVSV
                     EGSGALGPIPSLKSQAARYLAANGGKADANALYTVWGGANDLFAAAAAPAQAQAIIGA
                     AVTDQIALVGALKQAGAQYVLVPNLPNVGLTPSFRGPNAGAATALSAGYNKALYGGLK
                     QAGIEFIPLDTFTVLGEVAANPALYGFTNVTSTACKIDPTNPTQSILTCNPTSYVSPD
                     AANTYLFADGVHPTTAGHQLLGQYAVSVLEGPRLQQVLSHSAQTIGRSRADQVSMHLG
                     GRPADGLSWWGGVRGDLQRYDHADLYDGLAPAGLFGVDWARDGMVFGGFAGFGRLNAD
                     FGNSRGDFTQKDTTAGLFAGWYRDRIWVNGQVSYTWLSYDVNRKVQLGPATREHGGSP
                     DGSNLTAALNAGYEFGTEGGFRHGPIASVIWQKVKIDGYTESAATGTLATALGYDRQN
                     VDSTVGRIGWQARFDGGAVKPYAQLTYDHEFEDTKQASAWLQTLPELGSYRVPGLNFD
                     KNYATVVLGARTEMFGLQSNFGLSASAGQKRAQDATLFANFSGSF"
     gene            34990..35190
                     /gene="thiS"
                     /locus_tag="QEL58_000898"
     CDS             34990..35190
                     /gene="thiS"
                     /locus_tag="QEL58_000898"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016903326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfur carrier protein ThiS"
                     /protein_id="HDS1675400.1"
                     /translation="MNIQLNGEPRTLPASATLHDLLEAEQLLQRRVAVEVNGEIVSRS
                     RHGEHVLAEGDVVEIVHALGGG"
BASE COUNT         6352 a        11675 c        11005 g         6204 t
ORIGIN      
        1 acccatcggc cgggccacgc ccggcgccct gcctcagccc ttgtagccgt tgctgatcgg
       61 gtagcgacgc tcacggccga aggcgcggcg cgagaccttc gggcccggcg cggcctggtg
      121 ccgcttccac tcgctgatgc gcaccaggcg cagcacgcgg tcgaccacgg ccgcatcgta
      181 gccggcggcc acgatctccc cgcgcgactg ctcctggtcg atgtagcggt agaggatgcc
      241 gtccagcacg tcgtaggccg gcagcgaatc ctggtccagc tggttctcgc gcagctcggc
      301 cgacggcggg cggctgatca ccgccggcgg gatcaccggc gcgccaccca cggtattgcg
      361 ccacttggac aggccgaaca cttcggtctt gtacaggtcc ttcagcggcg catagccccc
      421 gcacatgtcg ccgtagatgg tggcgtagcc caccgcgtac tcgctcttgt tgccggtggt
      481 cagcagcagt ccgccgaact tgttggccag cgccatcagg atcacgccgc ggctgcgcga
      541 ctgcaggttc tcctcggtca cgtccggcgt ggtgccgtcg aacatcggcg ccagcgattc
      601 catcaggccc ttgaatgccg gctcgatcga caccgcttcc agcttcaccc ccagcgcctg
      661 gcactgctcg gcggccaggt cgttggacag gccagcggta tagcgcgacg gcaggcgcac
      721 ggcggttacg ttctccgcgc ccatcgcgtc caccgccagc gccagcacca gggccgagtc
      781 gatgccgccg gacaggccca gccacacctt cttgaagccg ttcttgcggc agtagtcctg
      841 gatgccgcgg gtcaccgcac gccaggccag cgcgtccatg ctttcgtcgc cgtcgtccat
      901 ccatacgtgc ggcaggaacc ggcggctctg gccgtcgtag tccaccacca gccactggtc
      961 gacgaaggca gcggccgccg ggtgcacggt gccgtcgcca tcggccacca ccgaggcgcc
     1021 atcgaacacc agcgcatcct gcccccccac cacgttgagg taggcgatcg ctgccccgct
     1081 ctcgcgggtg cgcgcggcca gcaccgcgtc gcgctgggcg tgcttgccac gctcgtacgg
     1141 cgacgcgttg ggtaccacca ccagctgcgc accggcgcgc acggtatcgg ccagcggttc
     1201 ggcgaaccac aggtcctcgc agatcagcag tcccaccgga acgccattga cctcgaacac
     1261 gcagctgccg ccgtccgggt ccacatcgaa gtagcgacgc tcgtcgaata ccgcgtagtt
     1321 gggcagctcg cgcttgcggt aggtctgctc gaccaggcca tcgcgcagca cgctggcggc
     1381 gttgtagacc accgcgccgg cagcctgcgg ccaaccgacc acagcggtta cgccacggca
     1441 ggcggcggcg atgcgcccca tcgcctgctc gcactcgtac aggaagcccg ggcgcagcag
     1501 caggtcctcc ggcgggtaac cgctcacggc cagctcgggg aacatcacca gctcggcgcc
     1561 gtactcgtcg cgcgcctggc cgatcatctc gatgatgcgc tcggtgttgc cggcgacatc
     1621 gccgaccggg aagtcgaact gcgccatcgc gatgcggatc gaagccatgg gaatccagcc
     1681 tgtggttgca atgcgcccat tgtagcgccg caccgtgtac gcaccctgcc cagcagatcc
     1741 acgccatggg tggatggggt tgcccggatg gcctggacac ccgacgcaga aaggccgccc
     1801 ggaggcggcc tttctgtttc aagcagccgg ccagcggccg gctctacaga atcgtctgcc
     1861 ggaggcagtc gatcttattt caccagcttg gcgatggcag cgcccaggtc gcccggcgaa
     1921 cgcacggtga cgacgccagc ggcttccatg gcggcgaact tgccttccgc cgtgcccttg
     1981 ccacccgagg cgatcgcacc ggcgtggccc atgcgcttgc cggccggagc cgacgcaccg
     2041 gcgatgaaac cgacgaccgg cttcttcacg tggttcttga tgtactcggc gccggcttct
     2101 tcagcgtcac cgccgatttc gcccaccatg atgatgcctt cggtctgcgg gtcttcgttg
     2161 aacagcttca ggcagtcgac gaagttcagg ccgttgatcg ggtcaccgcc gatgccgatg
     2221 caggtggact ggcccaggcc gacttcggtg gtctgcttga ccgcttcata ggtcagggtg
     2281 cccgaacgcg acacgatgcc gatcttgccc ggctggtgga tgtggcccgg catgatgccg
     2341 atcttgcact cacccggggt gatgacgccc gggcagttcg gcccgatcag cacggtgtcc
     2401 ggatgcgaac gggtcagcac gttcttgacg cgcagcatgt ccagcaccgg gatgccttcg
     2461 gtgatgcaga cgatgacctt gataccggca gcagcggctt ccaggatcgc gtcagcagcg
     2521 tacggcggcg gcacgtagat gaccgaagcg ttggcgccgg tgctctgcac ggcgtcggca
     2581 acggtgttga agaccggcag gtcgatatgg gtggtgccac ccttgcccgg ggtcacgccg
     2641 cccacaacct gggtgccgta ctcgatcatc tgagtggcgt ggaaggtgcc ctgctggccg
     2701 gtgaagccct gcacgatcac cttggtgttc ttgttgatca aaacagacat tggaattcct
     2761 tggtgtcggt atcaggcggc gttcttgaca gcttcaacga tcttcttggc gccatcgttg
     2821 atgttgtcag ccgggatgat ggccatgccg ctgtcgcgca gcagctgctt gccttcttcc
     2881 acgttggtgc cttccaggcg caccacgacc ggaaccttga cgcccacttc cttcacggcg
     2941 gcaatgatgc cttcggcaat catgtcgcag cggacgatgc cgccgaagat gttgacgaag
     3001 atgccttcga ccttgtccga ggacaggatc agcttgaagg cttcgatgac gcgctgcttg
     3061 ttggcaccgc cgcccacgtc caggaagttc gccggctcgc cgccgttgag cttgatgacg
     3121 tccatggtgg ccatggccag gccggcgccg ttcaccatgc agccgatgtt gccgtccatg
     3181 gtgacgtagt tgatgtccag ctccgaagcg atcacttcgg tcgggtcttc ctgggtcttg
     3241 tcgcgcatgg cgaccagcgc cttctggcgg aacgcggcgt tgtcgtcgct gtcgaacttg
     3301 ccgtccagcg cgtacaggtt gccgtcgtcc aggatggcca gcgggttgat ttcaaccagg
     3361 gccaggtcct tttcgttgaa caggcggtac aggttcacca tgatgctggc gaactggccg
     3421 gcctgcttgg cggtcaggcc cagcttgaag ccgaaatcac ggccgtggta accctgcacg
     3481 ccttcgacga agtcgacgtt cagcgagtgg atcagctccg gggtttcagc agcgacctgc
     3541 tcgatttcca cgccgccttc cgaagaggcg atgtaggtga tggtcttggt gccacggtcg
     3601 accagcaccg acaggtacag ttccttgacg atctcgccgg cggtggtcac cagcaccagg
     3661 ttgaccggca gttcaacgcc agcggtctgg taggtggcca tcttggtgcc gagcatcttg
     3721 gccgcagcgg ccttcacgtc gtcggtggtc ttgcagaact tgacgccgcc agccttaccg
     3781 cggccgccag cgtggatctg cgccttgacc atccaggggc cctggcccag ggagttggca
     3841 gcggcaaccg cttcgtccgg ggtcgcagcg accttgccgg ccgggaccgg gatgccgtac
     3901 tcggcaagca gttgttttga ctggtattcg tggaaattca tgcgtcaccg tgggaatagg
     3961 aacgaccgca cgcaattcct cagggccccg gcggggcgcc ggcatggacc gcggcgggcc
     4021 tactattgtg gccgagccag cgccggggcg caaagaagtc tgtacaaaac gccagacccg
     4081 gccagatttc caccgtcatt caggcagttg cgccgggccc ggcgctggcc accggtgtcc
     4141 gcggggggcc aaatgcgcga tccgggccac tcccacggca cgctttgcgg gggcctatac
     4201 tggtcagcca gggtgtgcag cgtcgagcct gctcgaccgc ttccaccacg ggccacatag
     4261 aagcgacgcg ccggcccggc ttcaggggac gccggaccgg tgcatcgcag attccagacc
     4321 caggcagcca gaaggggagt tccggcgtgt cacccagtgc ttcattgatc gaccgcatcg
     4381 aatcgatccc gcggcgtgag ctgtatttct tcgcgctgta ccgggtgctg atcgcaaccg
     4441 tcatcgccgc cctgctctac agccctctgt ccggcctggt cggcgaggcc catcacccgc
     4501 ggctggccga tgtggttgcg gtcatctatc tggcgttgtc gctgctggcc ctggtaatcg
     4561 gccgcaacga acgctggctg cggccgatcg tggtcagcgg cgtgctggtg gacatcgttg
     4621 ccgccacgct gttgtcacat gccctgcccg gtgccagcgc cggcatctcg atgtcgctgc
     4681 tgttcaacat cgctgccgcc gccaccctgc tgccgctcag cctcggcctg ggcctggcgc
     4741 tggccgccag cctggccacc ggcgtcgaat acacctggaa gctgctggaa ggcggcgacc
     4801 ccacccgcac cctggccgag ctggcgatgt tcaccaccag ctacctggcg ctggccttca
     4861 tcagctacca ggtcggcaac cgtgcccgcc gcaaccagca gctggccaac cagcgcggcg
     4921 acgaagtggc caacctgttc cagatcaacg aactgatcat ccgccgcatg cgcaccggcg
     4981 tgctggtggt ggacgccgac aaccgcatca ccctggccaa cgaggccgcc tcgatgctgc
     5041 tgggcgacaa cgacggcaac ggcgagagcg gccgcctgga cctggccagc gccgcgccgg
     5101 aactgacccg ccgcctgcag cgctggcgca atggctgggc gcaggacgaa ctgccgctgc
     5161 agctcaaccc cgaccagccg gaagtacagc cgcgcttcgc ccgcctgctg gccggcagcg
     5221 acctggcgct cgtgttcctg gacgattcca gcgtggtgtc ccgccgcgcc gaatcgctca
     5281 ccctgtcagc gatgggccgc ttctcggcca gcctcgccca tgagatccgc aacccgctgg
     5341 cggccatcaa ctacgccgtg cagctgctcg aggaaggcac cggcttcaac gaaagcgacc
     5401 gccgcctgct gcagatcatc cgccagcaat gccagcgcac caacggcatc gtcgaaagcg
     5461 tgctggggct ggcccggcgc gagcgcgcca cgcccgagaa cgtggacctg gccgccttcg
     5521 tgcgccgctt cgtgctggag tacaagcagg ggcagacgct ggaaacggac agcatcgaac
     5581 cgatcatcaa tgacagcgcg gtgatggccc aggtcgatac ccgccacctg taccaggtgc
     5641 tgaccgtgct ggtgcacaac gcgctcaagt acgggcgcat cggccagcag ccggcgcggg
     5701 tgcgcctgcg cgtggcccag cacgagcgca gcgcggtgat cgacgtgatg gaccgcggcc
     5761 cgggcattcc cgagagcgtg gccgcgcagt tgttccgccc gttcttcacc acctccgagc
     5821 acggcaccgg cctgggcctg tatatcgccc gcgagctgtg ccgggccaac caggcgcggc
     5881 tcgactacat tccggtgccg gccggtggct cctgcttccg cctggtgctg cccggtccgc
     5941 acacgctgtt gcccacctga ttccgattcc gtgcgtcaaa catttgtcgc atccagcccc
     6001 ctcgtttatc tttcacgccc atgaacgaaa cccgcagcgc cctcgtcgtc gacgacgaac
     6061 gcgacatccg cgaactgctg gtgctgaccc tcggccgcat ggggctgcgc atcagtaccg
     6121 ccgccaacct ggccgaagca cgtgaactgc tggccagcaa tccgtatgac ctgtgcatca
     6181 ccgacatgcg cttgccggat ggcaacggca tcgaactggt cagcgagatc gcccagcact
     6241 atccgcgcac gccggtggcg atgatcaccg ccttcggcag catggatctg gcggtggaag
     6301 ccctgaaggc cggtgccttc gacttcgtca gcaagccggt ggacatctcg gtgctgcgcg
     6361 gcctggtcaa gcacgcactg gaactcaaca acaccgaacg ccccacgccc ggccccagtg
     6421 ccgaacaggg tgcgcgcctg cttggcgact cgccggccat ggacgtgctg cgcaccacca
     6481 tcggcaaggt cgcgcgcagc caggcgccgg tgtacatcct gggcgagtcc ggggtgggca
     6541 aggagctggt cgcgcgcacc atccacgccc agggtgcgcg tgcggccggc ccgttcgtgc
     6601 cggtgaactg cggcgccatc cccggcgagc tgatggagag tgaattcttc ggccatcgca
     6661 agggcagctt cagcggcgcg cacgccgaca agccgggcct gttccaggcc gcccatggcg
     6721 gcaccctgtt cctggacgaa gtggccgaac tgccgctgca gatgcaggtg aagctgctgc
     6781 gcgcgatcca ggaaaaatcg gtgcgtgcgg ttggtgcgcc caacgaggaa ccggtggacg
     6841 tgcggattct ctcggccacc caccgcgacc tggcggaact ggtcgaagac gggcgcttcc
     6901 gccacgacct gtactaccgc atcaacgtga tcgaactgaa ggtaccgccg ctgcgtgagc
     6961 gccgccagga cctgccggaa ctggccgcgg cagtgctggc gcggctggcc cgcagccatg
     7021 gccgtgccac cccgctgctg gcgccctcgg cactcgaggc gctggcccag tacgccttcc
     7081 ccggcaatgt gcgcgagctg gagaacatcc tggaacgtgc gctggcactg gccgaggaag
     7141 actgcatcgg tgccgatgac ctgcgcctgc cgcagcacgc gccgcgcgcg ccgggcagtg
     7201 ccgcccccgc tgaggcggtg gccgacctgc agccgggcag cgccgccctg ccctcctaca
     7261 tcgagcagct cgagcgcagc gccatccagc gcgcgctgga agagaaccgc tggaacaaga
     7321 cccgcaccgc cgcgcagctg ggcatcacct tccgcgcgct gcgctacaag ctgaagaagc
     7381 tgggaatgga gtagagccgg gaccacgcag tcccgatcac gaacgcagac ccaagcggta
     7441 gtgccggccg ctggccggca acctcatgca tcgcggcatc cacgcatggc gtggatctac
     7501 ctcaatcctt ggtgacgcga ttgatctcgg ccaggctggt aatgcccgca gccgccttct
     7561 tcaatgccga ctgccgcaga tcattcacgc cgatctgctg cgccgcttcg gcaatctgca
     7621 gcgcgttgcc gcccgccagc acgatcgtgg cgatctcatc ggtcatcggc atcacctggt
     7681 agatgccggt gcggcccttg tagccctcgg tgcactcgtc gcagccgacc gcctcgtaca
     7741 gctggatgcc cgcatccagc tgcgcctggg tgaagccctc ggccagcagc gcatgctcgg
     7801 gcagcgtggc caggcgcttg cagttgccac acaggcggcg cgccaggcgc tgggcgatca
     7861 ccagcgtcac cgagctggtg atgttgtacg gcgcgatgcc catgttcatc aggcgcgcga
     7921 tggtctgcgg cgcatcgttg gtatgcagcg tggacagcac catgtggccg gtctgcgccg
     7981 ccttgatcgc gatctcggcc gtttccaggt cgcggatttc gccgaccatg atgatgtccg
     8041 ggtcctggcg caggaacgag cgcagcgcag cggcgaaggt catgccgcgc ttgttgttct
     8101 gctgcacctg gttgacgccg ggcaggcgga tttccaccgg gtcttcggcg gtggagatgt
     8161 tgcgcgtctc gtcattgagg atgcccagcg ccgtatacag cgacacggtc ttgcccgagc
     8221 cggtcgggcc ggtcaccagc accatgccgt agggcttgtg gatggcatcc tggaacagct
     8281 tctgctggtc cggctcgtag cccagcttgt cgatacccag cttggccgcg ctgccatcca
     8341 ggatacgcag caccaccttc tcgccgaaca gggtcggcag cgtgctcacg cggaagtcga
     8401 tctgcttggt cttggacagg ttgagcttga tgcgcccgtc ctgcggcacg cgcttctcgg
     8461 cgatgtccag ctgcgccatc accttcaggc gcgcggcgat gcgctgattg agcttcaccg
     8521 gcgcacgcgc caccatcttc agcaacccgt cgatgcgcag gcgcacccgg tagtcgtctt
     8581 catagggctc gaagtggatg tccgaggcgc ccttgcggat ggcatcgacc agcaccttgt
     8641 tgacgaactt caccaccggg gtgtcgtcgc ctttggcatc gatgccggaa tcaccgccgg
     8701 tgcccaggtc ctcgtcaccc gcggagacct ccaggttgcc catgccttcg tcgtcaccgc
     8761 ccagcgcgtc accgagcgtg tcgtggctgg catgccactg ctccagcgta cggcggatct
     8821 ggtcttcatc caccaggatc ggttccacca ccagattggt gtggaacttg atctcatcca
     8881 gcgagtgggt cgggttgctg gtaccgacga acagcttgcc cccacgtttg aacagcggca
     8941 gcacgttgtg cttgcgcagc agttcctcgc tgaccaggct catcgcgttc tggttggcgt
     9001 cgaaggtgga gacatcgaac agcggcatgc cgaactcgac cgcattggcc gcggccagct
     9061 gcgcggcacc gaccaccctg ttctgggcga accaggtcgg caggggctgg cgtgcggcgg
     9121 cagccttggc catggcatcg cgtgcgcccg cttcatccag ggcgccgtcc tggaccaggc
     9181 ggcgggccag gccggtgatg ccgacgaggt tggcggtggt agcggtgttc atagtgccct
     9241 cttgattcat tcagcccttc cagcgctgga catcagcgcc tgtggcaaag agccgattac
     9301 atgttaccgg tttgtcgttc cacgcctgct gacggacccg caggccggcg gccatccgca
     9361 cggtccgccg aggcacacca ggcagcatgg aagtccccgt cttcacgata gtattcacac
     9421 acttcacgct gcagatcggc aatggcaggt tccggcgcag ggtatggcgt gcaggcgatg
     9481 gttcgccgct catagtccac cacccgccag cagtgccggg cccccggagc gttgccagac
     9541 gccggatcgg tcatcacgcc ccatcgccca aggatcgctc cgcgctgctt ctcgcggagc
     9601 ttctccggca acaggtccgg gcgaacttcg aaacgaccat cttccgtcag gcgatacaga
     9661 taggacattt cctgtgccac ctggccttca ttgatgtgcg cccgctcaac gcccgtggag
     9721 cgcaggccgt tctccatgaa acgaacacga ttgcctggaa gatccttgtt ctggcgtatc
     9781 accggcaacc acgagagccc ttcgtagcgg tcgcgcctca ggccgaccag ttcggcgatc
     9841 gtgggcgcga cgtcgatcac tgagccaggt cccgcaaccc gtcgatgcgt ccagaccggt
     9901 tggccattgc ggaattgctg tatcgccatc accacatggt tctgcacgtc cgacagcgcg
     9961 aagctgccat ggccatatgc gcccacggct tggttggcgt cgttgtcatt gaactggtca
    10021 cggcgcattg caaagtcttc gccgtggtcc gacatgacaa ccaggatcgc gttgtccaga
    10081 cgccgcaagc ggcgcagctc atcgatcagc gcctcgaact gaccatcaac tgccctgatc
    10141 gcgttcagat actgggactg tgaatcctca tatcccttga ccttgcctac ccagtcaaga
    10201 gacctgtcct cacggatccc gcctggcaga tagggccaat gcggcaggca gaggtggctg
    10261 acaagaaaca gtggcgcgtc agccggcgca tcccgcaatt caccgatcag gcgggcgggg
    10321 tggtctgcgg tgcgatagct gcggtaggca gcgcgattgc cctggaccac gctcagcggc
    10381 tctgaagcgg gcaacgcagc cagcaggaga ttggttgcga agaagtcaaa gctgccgcca
    10441 acgacgaaat caagccctcc caccgtgggg acgacggttc tatcgaagcc aaaactctgg
    10501 tcgaaattgg cgaagcgcga ttcatccatg gcgagcatgg tgaagtaacc ctgccgcttc
    10561 aggtcccagg caagattctg gtcgcgcgag aattccgagc gtggatagag gttgaagcgc
    10621 gcgccgtgct tgagcggatt cattccggtc aaggtgctgt tgtaggagac aaacgtccgg
    10681 gccagtggcg tgcgaacatc atccatgacg accgaaccgg ccagcgtccg ctcgatggcg
    10741 ggggccagtc cgccggggaa ctcgccgtag gaagccagat agtccggacg aagcgagtcc
    10801 acccccagga tgatcacatc cggcctgttc tcacccatgc cctcccgaac gccgccattc
    10861 caaccccatg caccgaggca gacagccagg gcaagcaggg atccggcagc gaacaggttg
    10921 cggcggctgc gcaacaggga gtacagcgtg gacagtacag cgatcgccac cacggcgatg
    10981 caggcgccaa caagcaacgg cgacagccac tggatcatca gtaactcggc atccacgaag
    11041 gaggccgact gtggatacag ccatcgattg gcgaacatcg ccagcaaaac gaccacgctc
    11101 acaaacagca gactgcgcca gaacgcgtcc cgccgtttgg gcaggagctg gctgcaggcc
    11161 cgacgataga cccacatacc gccaacggtc agcagaagat ggctgccaat cgcgaaaagc
    11221 acaaacaagg tgattttggc agcgaacccc cgctcctcca gcaattcggt cgcgaactgc
    11281 tgcatgagat cggtacgggc gtgcaagccc tcgttgccga aacgatccgc gatctgatgg
    11341 acctgctgcc ccagcaggat cacccccatg acagcggccg ccacgtactg gcggacggcg
    11401 atccccttca tccccctacc tcattctcga caaaaaaaag ggccccgcat gcagggccct
    11461 cttctactgg ctcctcaggc acggatgcct gggcaatcag tccaacaggc cgattacgga
    11521 gcagccttgc ggcactcggc cggcaggtac ttgttgtcag cggtcgaggt gcaggtccag
    11581 gtgatgccgg cgctggccga cttcggctcg aactgcagcg cgacattctt ggcggctgcg
    11641 gtgccggtca cagtgatgac gccactggca cattccagct tcgcggtgtt cttggtcgcg
    11701 gtggtgaagg tggcaacgcc attgcaggcg gtgtcatcaa tcgtgccgcc ggcgttggcg
    11761 atgttctcac cgacggtggc cttggcaccc gaagccagca cggcgccttc cgagacgcgc
    11821 gaacggacgg tgtagtcctg gtaagccggc agagcgatgg cggccaggat ggcgatgatc
    11881 gcgacgacga tcatcagttc gataagggtg aagcccttct ggttcttcat tgtggtacat
    11941 ccccaagata gtggtggttg atttcagcgg acaggttcgg tccggccagc ggccggttga
    12001 gcgggtcctg ccccctgcgg gtggatcaac gcaggttgcg tgccaacccc ggcacgcctc
    12061 cccctggatt tccccgcgcc catgatggca gcaattctgc ggatgggaac cccccatatc
    12121 cgaatctgcg atggacgcgg caatgtgacg cagtgcgtca cctttggccg gcccccggca
    12181 cgaaatcgca cgctgggccg cccgccaact gcccagatgg gcatgaaccc gctaccatca
    12241 acggctagat gcccgcctgg ggatggcggg tcttggggag ccaacatgtc tgtcagtcgc
    12301 agtgcgatca agaaagagcc cgtggcgcgt agcaccatgg agctgcaacc gtttgtctgg
    12361 gaggggaccg acaagcgggg cgtaaagatg aagggcgagc agttggcgaa gaacgccaac
    12421 ctgttgcgcg ccgagctcag gcggcagggg atcaaccccg gccaggtgaa gcccaagccg
    12481 aaacctctgt tcggcgcggc cggcaaagcg gtgaacgcca aggacatcgc cttcttcagc
    12541 cgccagatgg cgaccatgat gaaatccggc gtaccgatcg tctcggcact ggacatcatc
    12601 gccagcgggc acaagaaccc gcgcatgaag aagatggttg atggcatccg gactgacatc
    12661 gaaggaggct catccctgca tgaagccgtc agcaagtacc cggtgcagtt cgacgagctc
    12721 taccgcaatc tggtcaaggc gggcgaaggt gcgggtgtcc tggaaacggt gctggacacg
    12781 gtagcaacct acaaagagaa catcgaagcc ctgaagggca agatcaagaa ggcgctcttc
    12841 tacccggtca tggtcgtcgt cgtcgccctg ctggtcagcg ccatcatgct gatcttcgtg
    12901 gttcctcagt tcgaggaagt gttccacggc ttcggcgcgg aactgcccgc cttcacgcag
    12961 atgatcgtca atctgtcccg gttcatggtg tcgtggtggt ggctcattgc tgcggtagtg
    13021 atcggagcag tcgttgccct cgtcatgagc tacaaacgct cgctgaagat gcagcacacg
    13081 atggaccggc tgattctgaa ggttccggtc atcggcgaag tgatgaacaa cagcgccatt
    13141 gcccgcttcg cccgtaccac ggccgtcacc ttcaaggctg gcgtgccgct ggtggaggcc
    13201 ctgggcatcg tcgcgggggc cacaggcaac aagatctacg aagaggccgt cctgcgcatg
    13261 cgagacgacg tctcggtggg ttacccggtg aacatggcga tgaagcagct caacctgttc
    13321 ccgcacatgg tcatccagat gaccggcatc ggcgaagagg ccggcgccct ggatgcgatg
    13381 ctgttcaagg tggccgagta ctatgagcag gaggtcaaca atgccgttga cgccctgagc
    13441 agcctgctcg aaccgatgat catggtcttc atcggcgtgg tcgttggcgg tatggtcatc
    13501 ggcatgtacc ttcccatctt caaactcggc gccgtcgtcg gataacacat acatggcttt
    13561 tctcgaccag catcccggcc tcggttaccc cgccgcggcc gccctgggac tgctgctggg
    13621 cagtttcctg aacgtcgtca tcctgcgcct gcccaagcgg ctggagtggc agtggaagcg
    13681 cgatgcgcgc gaggtcctgg aggaaccgga ctactacgag ccgcccccac cgggcatcgt
    13741 ggtcgagcct tcgcactgcc cgcactgcaa gcacaagctg agctggtacg agaacatccc
    13801 cctgttcagc tggatcatcc agggcggcaa gtgccgccac tgcaaggcgc cgatctcgct
    13861 gcagtacccg ctggtggagg ccatgacctc gctgctggtg ctggcctgtg tctggcagtt
    13921 cggcttcggc tggcagggct tcggtgccat cgtactgacc tgtttcctga tcgccctgtc
    13981 cggcatcgac ctgcgcaccc agttgttgcc ggaccagttg accttgcccc tgatgtggct
    14041 gggattgata ggcagcatcg acaacctgta catgccggcc aagcctgcgc tgatcggcgc
    14101 agcgctgggc tatctgtcgc tttgggcggt ctggtggctg ttcaagcagc tgaccggcaa
    14161 ggagggcatg ggccatggcg atttcaagct gctggcggcc ctcggcgcat ggtgcgggct
    14221 gaagggcatc ctcccgatca tcctgctgtc ctcggtgctg ggcgccatca tcggatcgat
    14281 ctggctgtac agccggggcc gtgatcgcgc tacccccatc ccgttcgggc cctacctggc
    14341 catcgccggc tggctgtact tcatgtgggg cgagccactg gtggagcagt atctggtcct
    14401 gagcgggctg cgctgagggg aatccccatg agccggtatg tggttggcct gaccggcggc
    14461 atcgccgccg gcaagagcga ggtgacccgg cgcttcgagg cgctgggcat cgtggtggcc
    14521 gacgccgatc tggccgcgcg cgccgtggtg gccgccggca gcccggcgct gggccgtatc
    14581 gccgaacgct tcggcgctga catgctgctg gccgacggca gcctagaccg ggcgcgcctg
    14641 cgtgcccacg tcttcgccga cccggccgaa cgggtggcgc tggaagccat cacccacccg
    14701 gccattcgcc tgctgatgca acagcagtgc gagcaggcca ccagccccta tgcgattgcc
    14761 gccattccac tgctgaccga ggtgggcggg cgtcaggcct acccatggct ggaccgggta
    14821 ctgctggtgg atgcccccga agccgtgcaa cacgcgcggc tgatgcagcg cgatggtatc
    14881 gacgccgcac tggccgaccg gatgattgcc gcgcaggcca gccgtgcgca gcggttggcg
    14941 ctggccgatg acgtggtggt caacgatggg cagccgcagg atctgcaggt gcaggtagaa
    15001 cagctgcatg cgcggtatat agctgcagcg gcggaatagc gcgaagttca gtcaggacgt
    15061 ttcggcagtc tccaaaggga tttggcgtaa acggcgcaat ctgcccatgg ctcgtccctg
    15121 ctctgctgca gacgcgtcgg aggcatcggc tgcgcgcccc tgatgaaaac caatctggat
    15181 ggcactgttc ctgagggcac aatgctggtg aaatcacccg catgaaggcc atatggaaag
    15241 tacaacggac catgggtgaa agtagtgcct tctgaaaaag ccctcacctg gcgcgaagac
    15301 agaagcccac tcaccattac ttcatgtctt tgcgggagcc gcaagcggag ccggatcatg
    15361 aaagagataa aggacctcag cggaaacgtc atttttacag tcccgcccac atctggaatt
    15421 cttgacctgg actcggccat gttggcgaac gccaatctgg acggcgctga acttgaaggt
    15481 gcgatcctca tgcagacatg cctatcaggc gcaagcttga taggtgccga cctgtactgg
    15541 gcgatacttt tcatggcgga cctgacagat gccaaccttc agcacgccga cctgcgtggc
    15601 gcagacctgc aagacgcaat cctgcggggc gccaacctgt cgggggccaa tctgggccgt
    15661 gacaatctgg gcggcagcac gcaactggaa ggtgcagacc tgagcacaag cgtgctggat
    15721 ggcgcgattc tcaccggggc actctatgac gacaagacct tgttcccccc gggattcctt
    15781 ccggaagaac gagggctgtt gaaatcatcg ggttgaaaga gacatgaagg atgaagccgt
    15841 cgcagcccgt tgatgtgcag cgaatgcaac tcgaaaacac caggaggccg cgctctgcag
    15901 cgccactgac attcgcaggt ccggtccaca ccggcgccga gaacgccttg tccggcgctg
    15961 gttatgatct caacaggctc aatgcctcat ccaggtgcgc accgcgcgga tctattccaa
    16021 ttgcaggcgc gcgtggcgga ccagctctcg ggcgcccaac agcaaaccat caaccacatc
    16081 cgggctgagc tgctggtggg caccgccctg ctcgcgtgcg gctgcagcgg cgtgcagcac
    16141 ttggaccagc acatccaagc ccgccagcgt gcgcccgagc ccagcccggg ttgcggcctg
    16201 cgcggggctg agaccctgag catcacaccg ccgaccatcc ggaccgtcat ggccatccat
    16261 gcgggccaac agggtaggca acaggtcttc ggggtcatcg agcagggctt cgagccgctc
    16321 ggccgcatgg gcaggcagcc ggttgacggc atcgccaatc agggcggaaa gatggggaaa
    16381 ttcggggcgt gcggacatgg tgagttcctc gcagacggca agccacctgc agaagcaagg
    16441 tggcggacgg tgcgggttgg cgtaccggat cacaacaatc aacaaaaggc tccggcggac
    16501 acttgcgagt ccccacgcac cgcccgccca agcaaggcgt gcggtgcatt ctccacaatg
    16561 ggccaagacc cctgggagct tgttgattgt cgtgttgatt tcaggacgcc aatcccggcc
    16621 aaggcacccg ccccggccca gccatcacgc cacctcacga agcgcatttc tgtagggaaa
    16681 atcgccactg caaggattcg tgcaacgaca cacgcccgac gcgcggcacg catcacagcg
    16741 gtgtcgcgat gcacctcggc gctgaggcac accagtagcg ccaagcacgc cggttacgac
    16801 actccgcgcg ctccctaggc ggccgcctcc tccgcacgct gcgacctgcg cgccgatgcc
    16861 tcggccaccg tctcgccggg cggattgaga tagcaggtgc gccagcgcag gtagccccac
    16921 tgccagtggt actcgcgccc ggtcagctgc aacgcttcat cgaagtcgtc ggggcgctgc
    16981 cgccagtcag tcagcgcttc cagctcctgc accgacattc ccaacggcac ccgtggctgg
    17041 aacatctgcc cggagcgttg gatgcgctcg cgctcctgcc gatgggaccg ctcaatcgca
    17101 tccagctcac gcatccgctg ctgatacgcc tcgcgctcgc gccgctgcac gtgaacccac
    17161 tcgtcatcgt ccagcccgaa cggcttgaac cacgcccgcg agtcgtgcac gtagccatcc
    17221 agaaacgctg ccactgcctg cggtggcgcc tgccgcgagt cccagatcga ttggatctgg
    17281 ccatccagcc actgctgttc ctttttgccc cgcaacctcg cctgcacgaa atcctgcacg
    17341 ggaataccct ggaaccgagg cggcgtggcc atgccgtggt gggccgcgaa aggttcttcg
    17401 gtgcgtaggc gggccgtggc gttgttgtag cgcatcgccc gcgcctcctg caccagctcg
    17461 gcattgccgc cgcccaggtc cgcgcggtcc tgcgcaggcg cctgcaggta gcccggctgg
    17521 cgatcaaagt catccagatg ctgccgacgc cacagcaggt actggcgata atgggcatac
    17581 atcagcaccg cggtacggtt ggccttggcg gcgggggtgc tggccggcag gaacggcgcc
    17641 atcgcctgca ggtacgcgtt gtagtgctgg cgcagtttcg gggagacctc gaactgagcg
    17701 gcggtttcct tatccgcttc gtccatcggc agcaacggca cccctgctgc cagcgcatgc
    17761 cggtacatgt cgcatagcgg aatctgcgaa agcttgtcgg catccttcgg cgaacgcccc
    17821 tgctcaccgg gcgtgtagcc gccgcccaca tccgaatgta ccccggggta gatgatctgc
    17881 tcgcagttcg cgccgtccac caggtccacc gggaacgaac cgcgtacttc atgcgcagcc
    17941 aacatatgca cacagcggcg tacatcggct ggaatgcgca ggtcttcggc cgacgcccaa
    18001 ccaccgtggc catcgaacat cgactcaaag aagctctgcg cggcacctac cgacgcgacc
    18061 gtatcgaaca agcccacgaa atcgatctgc accggaatgc cacacagccg cagcggcccg
    18121 ggaccggggt cgcacgcatc gccgagccag ttgcagaaca cgcgcgcctc agtggcgccg
    18181 cgtgagaagc caaacaccga tatacggatg cggtctacac ggggattctg cttctggaac
    18241 ggcgctacct tcttcgccag aaaagcacgg cgctcctgca acaccgcgcg acgcgagatg
    18301 tgatcggcac gcgccagatg ggtaccacgc acccgttgca gcgcaccgac catgttccag
    18361 aagccgccgc tgagtgagtt gcgaagatcg atttcctcct gcccttggtt gaccgctagg
    18421 tagttggaca gcgacatccg cgccgcctgc gccaagcgct ctacgtcctg caggtgcaag
    18481 cggagatcgg cactcatcct gcgcgcgatg ggggcggtgg aatcgaagcc cattgcggcg
    18541 gtgacggttg tctctgcgaa atgggtcaag agatgatcct ggacttgcat cagcatccag
    18601 ttcacccgac cctcgccgcc ccagccggct gccgcgccag cacgggcatg ccagccggtg
    18661 ccggtatcgc cgatttcttt tagcgcctcg gtgccgacgc cctgaatgta gctagaaaac
    18721 tggctgcggc gaactcctgt gcccggcaaa ataccccgat caaatacatc gaacagacga
    18781 gaaatattgg actgagtgaa gtcaccacgc cttaacgaat tcaaacgatg attacgcgtg
    18841 ccatcgaaga agcagccgat aaaaatgtcg atgccacatg gcgaaatcgt gccaattgat
    18901 gatcccgcac atcgagactt ctcgcgcgca ctaagaccta ttgaattctc gtccaacggc
    18961 gctgaagaac ttaccttcat cactcctatt cctctccatc cgaatcaata agaaatctag
    19021 aaatcctttc agggtcacgc tcaagctccg cgtgatcgat gtcgtaggca aacttcggat
    19081 agccgggaaa atacggcgtc gccaccactc tcacctggtc atccgggaaa tacatgaaat
    19141 aaataaaccc atcaagaaaa ggcttatatg gcgcaacgag gacgtttttc tcaacatagc
    19201 ttcgagggtc cttgagaaac atgctactgg tgcggtaagc caccgtcacc ttcaaccctg
    19261 gatgccagag acgaggcaac gtcacgcagc aggtggcagc atttccgctt gcacgagccc
    19321 gcatagctcc cgcccaagcg tcattaatga agaccgtccc caacccatca tccgaatagt
    19381 tggccacgcc gattgtcaat gacatctctg gcggtgcgtc agtgatgtcg tgaccagaaa
    19441 cggagtcgat gatgcgtggc ttcggaggac cgggcggtgg tggacccatc ctgaaatcca
    19501 tgaacttgag cgccaggcct gccaaggcaa acatcgccag cccgatcaga gcaatcctga
    19561 caaacacctt tttcaccacg gccattcgct cgacgccctt cattcaaacg caccctcgtc
    19621 tacgacgcag gttggggtag atgatctgct cgcagttcgc gccgtccacc aggtccaccg
    19681 ggaacgaacc gcgtacttca tgcgcagcca ccatatgcac acagcggcgt acatcggctg
    19741 gaatgcgcag atcttcggct gttgcccagc cgccatggcc atcgaacacc gattcaaaga
    19801 agctctgcgc ggcacctacc gacgcgaccg tatcgaacaa gccgacgaaa tcgatctgca
    19861 ccggaattcc acacaagcgc aggggcccgg ggcctgggtc gcacgcatcg ccgagccagt
    19921 tgcagaacac gcgcgcctcg gtagcgccgc gcgagaagcc aaacaccgat atacggatgc
    19981 ggtctacacg gggattctgc ttctggaacg gcgcaacctt cttcgcaaga aaagcgcgtc
    20041 gctcctgcaa gactgcccgc cgcgctatgt gatcggcgcg cgcgagatga gtgccacgca
    20101 cgcgctgtaa cgcgcccacc atgttccaga agccgccgct gagcgagttg cgaagatcga
    20161 tttcctcctg cccttggttg accgctaggt agttggacag cgacatccgc gccgcctgcg
    20221 ccaagcgctc tacgtcctgc aggtgcaagc ggagatcggc actcatcttg cgcgcgatgg
    20281 ggacggtgga atcgaagccc atcgcggtcg tgacggttgt ctctgcaaaa tgggtcaaga
    20341 ggtggtcctg gaccttcatc agcatccaat tcacccgacc ctcgccgccc cagcccgccg
    20401 ccgcgccggc acgggcatgc cagccggtgc cggtgtcgcc aatttctctc agcgcctcgg
    20461 tgccgacgcc ttggatgtag ctcgcaaaat tggttggccg acgaccaatt cctttggctc
    20521 gccctagatc atagacgtcg aagagtcgag acacattgct ctcgctcatg tccttacgct
    20581 tcttcgatgc cagcctgtga ttacgagtcc catcgaagaa gcagcccatt gacacgtcta
    20641 ctccgcaatc cgtttcagtc cccatacggg aagaggagta tctccctagt tcagtcaaac
    20701 tgagttgcgc cgaaggatct gacaccggag gcgccacatt tactctcatt ctgtcacccc
    20761 gccccttgcc gtcacctcaa gaaatccatt gatcttttct ggatcacgct cgctgtcggc
    20821 aaaatcaaga tcgtaagcaa atttagggaa tcccggaaaa tatggcgtag ctatgaccct
    20881 cacctcatca tcagggaaat acataaagaa gatgaaacca tccaagaagg gcttgtagcg
    20941 cggcacaaaa atctccttct caatatagct atgcggatcc ttaaggaaca tgctactcgt
    21001 acggtaagca accgttactt tcaggcccgg atgccaaagc cgaggaagcg tcacgcagca
    21061 ggttcggcca ttgctactgg ctcgggcacg catcgcacca ccccacgcat cattgatgaa
    21121 gacttttcct aatccctcat cagagtagtt cgcaattcca atcatcagat gcatttctga
    21181 cggcgcgtcg gtgatatcgt ggccagacgc agcgtcaatg atgcgtggct tcggaggact
    21241 gggcggtggt ggacccatcc tgaactccat gaacttcagc accagacccg ccaaggcaaa
    21301 cagcgcaagc ccgatcagtg caatcctgac aaacaccttt ttcaccacgg ccattcgctc
    21361 gacgcccttc attcaaacgc accctcgtct acgacgcagg ttggggtaga tgatctgctc
    21421 gcagttcgcg ccatccacca ggtccaccgg gaacgagccg cgtacttcat gcgcggccac
    21481 catgtgcaca cagcaacgca catcggcggg aatgcgaagc agcccattga aagatccaca
    21541 ccaaattcgg atctgatttc cgacaatgag gccgcatatc gccccgcttc actggaactg
    21601 agctgcgttg gttgctctga cgtcggagta gataccctta ccctcaccat tccgcctcct
    21661 tgcccgctgt tgcttccaga aatctcttaa tctttgctag atcatcgtgt ccatcaccga
    21721 agtcgatgtc gtaagcgaag cctggatatc ctggggagta ggaagtggcc gtgacccgca
    21781 cctgataacc cggaaagcag aagaaatcgc gattaaaaat ttcaaaaagg cgcgagatgt
    21841 ttgattcagt tttattaccc aggcgatgat aattcagcct gtgatttcgc gctccatcga
    21901 agaagcaacc aatgaagatc cccgcaccac aatcggaaga tgattcgaca ttcgcacctt
    21961 cattgcgagc tagttcacga tgactcaagc tggcactact gtcagaagcc ggaggtgata
    22021 cagccactct cattgcacta cctcctcagc agcggtctcc ataagaaacc gtgcaatctt
    22081 tgcttcgtca cgctcacacc ctgcaaactg aatgtcgtat gcgaacccag gataaccggg
    22141 cgtataaggt gtagctacca ccctcacctg atcacctgga aagtagaaga aatagatgaa
    22201 tccatctaga aacggcccat atggcgcgac aagaatgtcc ctctcaacgt agctctgagg
    22261 atccctgaga aacatgctgc tggtgcgata gaccaccgtc accttcaacc ccggatgcca
    22321 gagacgaggc aacgctacgc agcaggttgc agcgttccca ctggctcgtg gctccatccc
    22381 acccgcccaa gcgtcattaa tgaagaccgt ccccaacccg tcatccgagt agttggctac
    22441 gccgattctc aatgacatct ccagtggcgc gtcagtgata tcgtgaccag tatccggctc
    22501 aatgatgcgt ggcttcggag gacctggcgg tagtggacca atcctgaaat ccatgaactt
    22561 cagcaccagg cctgccaaag caaacagcgc cagtccaatc agaatcaccc tcgtcagaaa
    22621 cttcttcatg gcgtctcatc ttcgccatgg cgcccattcc tcacggcaac ctccttgatc
    22681 gtcatccgat gcgccagcgc ggggtgatcg atgcctcggc gtgccaaacg ttccagcacg
    22741 tgctccgcgc agcgatgcac ctgcgagggc agcatgccgt ccgggcgcag cacgggccgc
    22801 tgcagaatga agcgcgtgat ggcatcggcc tggcttccgc tccgtagtgt ggcctcctgc
    22861 gccgcggtga acgtgagcgg cctggcgtcg gtatcgagcg gcactccccc cttgccggtt
    22921 acgcacatcc aatctccgat gcgggtgggc aggtgccagt cgtgtagacc gcccagtacg
    22981 cgcgtccgct gtgcatcgtc cagcgcatcc agcaggcggg cggcggcacg cccatcggcc
    23041 cagcgcagca accacggctg gtcggtgctg gaacggccct cccaaatccg ccgtagatgt
    23101 tcggccaatg catgcgggtc gccggtgctg cgcagcaccg acagcatcgg tgcgccgcgg
    23161 ctcaggtcca gcagcgcctg ccagcagcgt tcgcgtgctc tggcttcgcc cggcaggacc
    23221 accaggcatg gcgacaaccg gtccaaccct ttgccggtat agcgatgcgt aaacagcggc
    23281 accacgtcag cggccagcgc gcgcagctgc gtccaggcgt ccggcgcgaa tgccatgtcc
    23341 agcagcgcac aggcgggccg cgcgtccaca cactggtcgc cgggggtctg ccacggcaac
    23401 cgggaatgcc gccacggatc gatccacggg gcgtcagcca ttcttcgtag accatggcag
    23461 gccggcctgc atcgccttca gcaggcactc cacgcagacc gtctgtgcga actgcggtag
    23521 cggaaacagc tcctgcaccg gaccggtgaa gtgccggttg ccggctttga tggtcaatgt
    23581 gcctggacag ctcatccgca ggtgcccgtc cgccagggtg atcgaagcgc cgccggccgt
    23641 tgcgatgtgc agcgtgttgc ctgccgccag ttgcacctcc ccgtgctggc tggccgccac
    23701 cagcccagcg cgcgcctgca ggtgcacggc gtctgcctgc gcctgcatat caagcacctg
    23761 ttggccagcc accacgctca acccggcact tcccggattg cgtgtggcac ccgccaacac
    23821 acctatggcc tggcggcact gccaacgccc atggccagca acggtcaccg acgaactacc
    23881 gccactggcc agcaacgtac tgtgccccac gcccagctgg atcgcctgcc cggccacctg
    23941 gcagatgcct gccggtgcgg acaggccaag caccgcagac ccggttgcag ggatgtcttc
    24001 gtcagcgccc tgcagccgct gcgatgccgc cacgctgtcg gccaaggcct gcagcacgct
    24061 ggcaccgttg cccccggcgg cgtggccgcg cagccgcact gtgcgctgct gccgtgccgc
    24121 ttcatcaaag gagtgcgcca gcacgagcgt ctgccgcaac agcgcgaccg gcgcggcgcg
    24181 cagaccggcc ggggtggacg cagagcgctg catgctgtcc agccacaggc ctgccgtggc
    24241 acgcacggcg ccccacgcgt cgctgcgcag ctcgaatcca cttccgcgca ggctgccgcg
    24301 gaagttgtgc tgcaggtgac gcagatgacc catgctgatc gcgctgtggc actgcgttgt
    24361 gccaagccgt acctgcagct ggtcgtcgct gtcgtcgaac tcgagactgt taccgccatg
    24421 gccgtcccag ctctgcgagc tgatgcccca tacggcgccg gcattgcgct gggccgattc
    24481 gcccgcgcct gcggcatgcc agcgcggggc gttgccaccg gccaggttgt tctgggcact
    24541 gctgccagca tcgctggaca acgccagcgc ttcagcgcgt gactcgcccc ggccgttgta
    24601 gagcgcaccc atcacgatgg ggcggcagag gtcgccgttg atgaagtcca ccaccacctc
    24661 ctggccgacg cggggcagga actggctgcc cccgccgggg ccggcaaagg tctgggcgac
    24721 gcgcagccag ccgctgtcag ccctgctgtc ggtggcaaag ccgaactgca cacggatgcg
    24781 cccgttgctg tccatgtaca gcggcgcacc gtcatcgccg ccgagcacgg tggccagttg
    24841 tgggccgggg gccgtcgacc gcccagccct gccatccgga gaacgtcgcc accgacggtc
    24901 gaacggcatg gcctcgaagc gattggcata gcccagcctc tgcgcgctgt cggcaggcac
    24961 ggtgtcgggc agtgcgtgca gcggcaggtg ctgctgcagt tcgagaacct caggcagcgt
    25021 gttgaccgct gcgtgctgca ccgctgtaag cagcaacgcg ggtaccgctc gctggccggg
    25081 ctctggcaac acctcgaatg cgtagccggg ctggaagtcc ggctcggtgc cttcgccggt
    25141 ccagcgccgc tgctcacaca acgctgcctc ggtgtcgcgc atcacctcgg ccaaggcctc
    25201 gcgcgaggtc tcccacgccg cgtggcgtgc cggcgaatag tcctccaatg ggccactggc
    25261 cacagtgcgc acaggcaggc tggccgaaac cacacgcaac ggatcgtcca gatccgccac
    25321 ccgggtcatg tgggtcggca cgacgcgaca ggtctcatgc aacagcgcga tgcccgcgtc
    25381 atcgggcacg cgctgggtct ggtgcaggcg tcggggccgt gacagcagcg agcatcgggt
    25441 actgtcgccg aagatcatca tcgtatgccc gcccggtaca tcgggcagcg tgcggatgca
    25501 ccagcccagg ccttcatcgg ccatcaactg ctgcaggaac gccatgtccg attggcggta
    25561 ctgcacgcga tagccccggc accggcggtc gatggcagca gtacttccaa cgtgccagga
    25621 ccaatgcgcc agcggcgcgt gcaccgagag caccgtgctg atgatgctgg ccacgtcctg
    25681 atcctggaac acgcgactgt ggcggctgtc atgcagccag gcggtccagt cggccaggtg
    25741 cacgcggtac cgcacgaggc ggcctgcgca ggccaggcgc tcgacactgc ggatcagccc
    25801 gccccggaca acgtctgcac cgtccggcag gcgtgtggtg atgcttgccg gccgggccac
    25861 ccaatcatcc aggctgtgct cgcacggctc gcccagcaga tcgatctggc agcgcaggcc
    25921 ttcggacaac gattcgctgc cgtgccagcg ctccacgatc aatcgcaatg cggtagggcc
    25981 gcagaagcga tggacgcgcg acgacgcctc gtgggcagca acgaacgatg atcggtgatc
    26041 catggcagtt cgttgacaga cacagcacgc gaagaaacgc gctttccatg cttcaagcct
    26101 tggcggatca atgccgggga cgcaatccga aaagtttctg aaaagcgtcg aagatcaatt
    26161 tctgcttggt attacagcac ttgcacgatg catcgcgggg gcgtgcagcc gttgccgagc
    26221 catcagcaag gcggaatacg acaacggctg cggggcggtg cctgaggcgc gacgactatt
    26281 gcagcgtcgc cgaaccccga ttcctttcgg cccgcaactg ccgttgtgcg tggctggtca
    26341 gctcccgcgc agccagcagc aggccattca tcgcatccgg gggcacgacc tgcgacgggc
    26401 ctccccgggt gcgtgcgaca tgcacggcat acatcatccg ggtcaagctc gtgattcctg
    26461 cgacggtgtg ccggatgcct gccagcgtgc cagcctccgg ggcactcagc ccggtgcgct
    26521 gcgtagaacc gtcgatgtcc atctgcccct tcagcatccg catcagacca tcgggcccgg
    26581 acagtacgtc ctcgacgcgc tgggcgattt cgacggacag ctgcctgatc gattcgccga
    26641 ccagttgata caggttcggg taatgggtgc ggtatgacat ggcgcagctc ctggcggacg
    26701 gtgggtgatc ccggcagaag catctgactc tgtgctcgtc ggtccgtcag ggggcaaatg
    26761 cgccaacagc gcaatcagat cgccgaaccg tgagccatga cacgcaacag cgccacaacg
    26821 cccgcgggga tcgcgagccg gacggccccg gacgggcgta ctcgtgctgc gtacgacagt
    26881 ggattcacgc cctgcgtggg gctcacgtgc cgaccaaggt cggcacttac caaagcagcg
    26941 gcccttacaa cggcttcggc gagaacgtga gggtggcgat tacgccgcgc tcgccacccg
    27001 ggcgcacgct tacctgccag ccgtacagat cgcacaggcg gctgacgatc gacaggccga
    27061 tgccgccgcc ctgcgaatgg ccggcatggg tgccgcgata gccacgctgg aacagcttgg
    27121 ctgcatcttc ttcactcagg cccgggccgc tgtcggtcac cgagaccgcg ttggcaccca
    27181 cgtgcacgcg cacctcgcca tcctgcgagt acttcacggc attgccgatc agattgccca
    27241 aggccaccga caaggcggct tccggcgcgt cgatcaccag atcgcgttcg ccttccagcg
    27301 ccagctccag cggcttgcca cccagctgtg cgcggtgcgc atccagcagc tgctcggcca
    27361 cgcgcgcgac gttgctggtg ccctgcccgc gctcgttgcg cgacagcagc agcagcgcgc
    27421 cgatcaggtc gctgcactgc tgttcggcgc gctggatgcg ctgcaggcgc tgcagcacct
    27481 tctcatccag gccggggcgg gtcagcagca gctcggtggc gccgcggatc accgccagcg
    27541 gcgtgcgcag ttcatggctg acgtcggcat tgaactcgcg gtcgcgctgc accacctcgg
    27601 tcaaccgcga cgagtaatca tccagcgcct gtgccagctg ccccacttcg tcatcgggga
    27661 agcgcggcgc cagcggttcg ggatcactgg tgccgccgcg ataggcacgc agccgcgccg
    27721 ccaggtccga gaccggcttc atcaccttcg acgccgacca ccagcccagc accagcgaca
    27781 gcacgctgaa caccaacacc gacagcacca gcgcgcggtt gagctgtttg ccaccgcgca
    27841 cgctgtcggt catgtcatag gcaaggaaga accacgcgtc atcgctcttg cgcacggcca
    27901 gcttgtaggc atacggctgc ccctgctcgt cggtgccgct caggttgtag ttgccggtct
    27961 gcagatcggc ccattgcggc caggattcgc gcgccttgtc gaacttgtcc gccgagtagg
    28021 cgtatgcacg gatctgctgc accggcacgg cggggttgcg ccccggatgc tcgtagaagc
    28081 gacgcgcgta ctcttcgatg ttgtggttga tcacgtcttc caccaactgg ttttccaccc
    28141 gcatgcgggc ccagttggtg gcgaacgcga acagtgtcgt caggcagaag cccaacaaca
    28201 cgaacgagac gatgatgcgg ctgcgcaggc gccgccgata aggcgtgcgc cgacgctccc
    28261 ctttcgctgc caccgaatca ggcttccggg gtagcgatgc ggtatccgat gccatggcgg
    28321 gtctggatca gcggcacttc aaacggcttg tcgaccaccg cacgcaggcc atggatgtgc
    28381 acgcgcagcg aatcggagtc gggcagttcc tcgccccaca cccgggtttc cagctcctgg
    28441 cgggtcacca cggccggggc cgcttccata agcgcctgca ggatcttcag tgcagtcggg
    28501 ttgagctgca gcagcttgcc ctggcgacgc acttccagcg tatccaggtt gtattccaga
    28561 tcgccggttt ccagcacgcg ggtctgcacg cccttgccgc ggcgcgacag ggcattcaga
    28621 cgtacttcca cttcctgcag cgcgaacggc ttgatcaggt agtcgtcggc accggaatcg
    28681 aagccggcca gcttgttgtc cagcgaatcg cgcgcggtca gcatcagcac cggggtctgc
    28741 ttgcgcgctt cattgcgcag cttccggcag acttcgatac cgtccatgcc gggcaggttg
    28801 agatccagca cgatcgcgtc gaactcgtgc accacggcca gatgcaggcc ggtgaccccg
    28861 tcagccgcga agtccaccgt gtgcccgcgg tcctccaggt aatcacccag attggccgca
    28921 atgtcgctgt tgtcttcgat taccagaatt ctcactgtca cctctaattg acgaatttgc
    28981 cggtgcgctg ggcctggctc atgtcacgct gtgccctgtc cttctgccgg gcgcgctcgg
    29041 caacggtgct gcactgcgtg gtggaccggt tcgaacccgt cactttctcg cgctggcata
    29101 ttagacgact atcctcacgc gcttgtgtca aaaccgtgtt cacgatctgc tggtcgttga
    29161 agatatcggt tcgcacctgt tcaggcatcg aatcgcggtt cggatgctgc tcgacggccg
    29221 tgcgcatgcg caccagcgcc tcacgtaccc ggctgcgatc gctctgcttc agttcgctgt
    29281 aggtctcgcc atcgttgagc tggatttcga tgcgctcgat ctgctgctgc agcggcttgc
    29341 cgggcaggaa gacttcgctg gactctttgg acgcagaggc gacggtggcc agggtcagcc
    29401 ccgagaacag caccgccgac atcaggaggg acttcatgac aaacgaatcc ttgtttgaat
    29461 ggatcgctga ctgtattcgc accaccttca cgccagcaag tgccaagcgc aggggcggcg
    29521 gacggcctag cggttgccgg gaggcgagag gtcggtgaag gtgcgctggt catggagcag
    29581 ggccttgccc ttctcctcga tgcgccgccg ttcggccacg gtcatgcatc ggcttttggg
    29641 catgttgctg ccggtggtgc gggtgtattg gcagacctgc cggctgtcat catgggcccg
    29701 ggcaagcagg gtattgaccc gttcctggtc gttgaagacg tcgttctgga cctgcggcgg
    29761 cagttcctgc agcgtctggc ggtcccccat ccgctgggtg atgcgcgcca gtgcctgtcg
    29821 cacctgggcg cggtcatccg cggaaatctc actgtagtcg ccgtcgtcca gggccttctc
    29881 gaccttccgg acctgttcgg ccaccggcat ctgccggtcc atctgtacaa cggctttttc
    29941 cggcttggcg acagccgtgc ctgccagccc cagcaacaac gcgatcatgg tgacgcgata
    30001 catcgcttgc ctccgatcca tccaggaacg atggaggcca ctctacggcc gtcacggcgc
    30061 ctccacaagc ggcgcgcctg gcccataaaa aagacccagg cggtgccccc gcctgggtct
    30121 gaagttgtat cccgataccg atcctgctga gaggcagagc tgcggttcgc tgaaggctac
    30181 gcccgggccg attaaaggca tgttaaacca ggcctcatca acccatgaga ttcataagcg
    30241 actgaataat cagggctttt taagcttctc cacgtgatcg atgatgcgcg tggccacgtc
    30301 caccccgcac gccgcttcga tgccctccag ccccggcgtg gagttgacct ccagcaccag
    30361 cgggccgcgc gcggaacgga tcaggtccac cccgcacacc gacaggccca gcgccttggc
    30421 cgaacgtacc gcgacctgct gttcggcgcg actggccttg gccgccaccg ccgtaccgcc
    30481 cgcatgcagg ttggagcgga agtcgccctc cggcgcctgt cgctgcatcg aggccaccac
    30541 ctggtcgccg accacgaagc agcgcaggtc cgcgcccttg gcctcgccga tgaactcctg
    30601 catcaggaaa ttggcgtaca gcccacgcag cgcctcgacg atgccacgcg aggcgctggc
    30661 cttctcggtg aggatcacac cgcggccctg ggtgccttcg ttgagcttca ccacatgcgg
    30721 cggcgggccg agcatggaca gcaggtcgac ggtgtcgtcg gggttgtcgc cgaatacggt
    30781 gaccggcatg tcgatgccct tggcagccag cagctggtgc gcacgcagct tgtcacgcga
    30841 gcgcaggatc gcatcggacg ggttgggcgt gcgggcgccc atcagctcga actggcgcag
    30901 cacggccgtg ccataacggg tgatcgaggc accgatgcgc gggatgacca tgtccacgcc
    30961 ggtcatcggc cggcccttgt agtgcatcga gaagccatcg gcggcgatgc gcatgtagca
    31021 gcgcagcggg tcaaggatac gcacggtgtg gccgcgcgcg cgcgccgcct cgaccagccg
    31081 gcgggtggaa tacagggagc tgttgcggga caggatggcg agcttcatcg cggcgggatc
    31141 gggcggcagg cgcgcagcat agcgcgcgcg tgtggcgggt ggatgatgcc gcgcccgatg
    31201 acgccggcac cgccgcagag gctgtgccaa gatggccacg ccggccacag gacaggaaca
    31261 cggccggctt acacaaccca aggagaacca cagatgcgaa tgggaattcc gctgttgttg
    31321 ctgtttggcc tggcgggtgg cgccaccgaa gtgcatgccg cgcccaccca tgccgtctcc
    31381 cggctctatt tcgacgccag caacacgctg attggccaga gcctgcgtta ctgcaccggc
    31441 agaacccaac accagggggc tgcctcacat accaacaccc gctggatcga tgtcacctat
    31501 gcctgcaacg gcgactcgac cgaggtgagc tacggaggct gggtaccggc cgacctgcgg
    31561 caggatttct gcggcctgta tgacgcctgc accttgttga tgccgtggcc ggaacacacg
    31621 ttgcccggtc cgctggcccc cggcttcaat tccgactgac cggccgcccc gcgacaacgt
    31681 ctccggcgat ggaaccatcg ttgccggaga cacctttcga cagtgcgatg atttcctcca
    31741 tgcgtgcgcg cgcctgttgc atctgctcgg gcgcaagcat cccatggctg tacagctcct
    31801 caagcgagtt gtaaccacac acaccggcgc ggcacatgcg ttggaggatg ggggaatcgg
    31861 cgccgcacgg tacgcccttt cggcagcccg ccagcatcca tgcagcttcc tcgacggctg
    31921 tgcccgcctt gtagggcttc aacgcgtcga tgcggtggga ggcggcttcc cccatggttg
    31981 ccgcaagtgc catgtaggct tcaccgtcgt cctgcatgag cacggcttcg acaaacgtct
    32041 tgtggtcctc caccgaaaga tcctggtccg cgaggtggag gccaggcgcc gcctgttcga
    32101 tctgtgcagc aaggcttccc tgattcaccg ccagttcccg atagcgcttc agattgcgga
    32161 agccgctcac aacgtcctcg ggcattcctt cgcatcgcgc cttgaaccac gccgtgctgc
    32221 gctggagtgc gaccttcttt tcctgtgcga tgtccaatcc cgcgagcgag ccccagtcag
    32281 gaatgacggc acagtcgtca tggatgcggc tgagtacaaa actcgcgttc gcgtcgccgc
    32341 tcctggacag gaattcaagg tccgccatca acggctgaac gtttcgagcg gtgtagtact
    32401 tctgataggc ggcgggcgca tttcccgtgg ccgccatgcc ggagttcgcg actcctgtgg
    32461 cggggatgac cgtggcgctt gcggtgcgcg ctgcatgtcc ggcttcagaa ggggccgtgc
    32521 tgtccgtgca cgctgtcgtt gccagtgcca gcactggagc cagcagaaag gcgttccatc
    32581 gtgagctggc ccgcatcctc attccttgtc ccaacgtcat catccggcgt gaaggggcat
    32641 tcactctagt gatgctgcac gtcggtcaca aggctggatc gacaggcaca cgaaagcggg
    32701 catcgagcgc ccgaatctgc ggtgcaaaag aaggaggtgc gatggagcgg gcgatgggaa
    32761 tcgaacccac gtcagtagct tgggaagcta cagctctacc attgagctac gcccgcgttg
    32821 cggtggaaag tctatgcgct ggggccggtg ttgcgcaatg gttggccgcg ccgcatgcgc
    32881 cggacacggt ccggcgctgt tgtcaggcat cccgggcacc gtgcggtgcc cgggatgacg
    32941 cgtgtgtcag aagctgccgc tgaagttggc gaacagcgtc gcgtcctggg cacgcttctg
    33001 cccggccgaa gcgctcaggc cgaagttgct ctgcaggccg aacatctccg tacgggcacc
    33061 cagtacgacg gtggcgtagt tcttgtcgaa gttcaggccc ggcacgcgat agctgcccag
    33121 ttccggcagg gtctgcagcc aggcgctggc ctgcttggtg tcttcgaact cgtggtcgta
    33181 ggtcagctgt gcgtacggct tgaccgcacc gccgtcgaag cgggcctgcc agccgatgcg
    33241 gccgacggtc gaatcgacat tctggcggtc atagcccagc gcggtggcca gcgtgccggt
    33301 cgcggcgctt tcggtgtaac cgtcgatctt caccttctgc cagatcaccg aagcgatcgg
    33361 gccgtggcgg aaaccgccct cggtgccgaa ctcgtaaccg gcgttcagcg ctgcggtcag
    33421 gttgctgccg tccggcgaac cgccgtgctc gcgggtggcc gggcccagct gaaccttgcg
    33481 gttcacgtca taggacagcc aggtgtagct gacctggccg ttgacccaga tgcggtcgcg
    33541 gtaccagccc gcgaacagac cggcggtggt gtccttctgg gtgaagtcac cgcggctgtt
    33601 gccgaagtcg gcattgaggc ggccgaagcc ggcgaagccg ccgaacacca tgccgtcgcg
    33661 tgcccagtcg acaccgaaca ggccggccgg cgccaggccg tcgtacaggt cggcgtggtc
    33721 gtagcgctgc agatcgccgc gtacgccgcc ccaccaggac aggccgtcgg ccggacgccc
    33781 acccaggtgc atgctgacct ggtcggcgcg cgagcggccg atggtctgcg ccgagtggct
    33841 cagcacctgc tgcaggcgcg ggccttccag taccgagacc gcgtactggc ccagcagctg
    33901 gtggccggcc gtggtcggat gcacgccatc ggcgaacaga taggtattgg ccgcatccgg
    33961 gctgacatag ctggtcgggt tgcaggtcag gatgctctgc gtcggattgg tcggatcgat
    34021 cttgcaggcg gtgctggtga cgttggtgaa gccgtacaag gccgggttgg cggccacttc
    34081 gcccagcacg gtgaaggtgt cgagcggaat gaactcgatg ccggcctgct tcaggccacc
    34141 gtacagggcc ttgttgtaac cggccgacag cgcggtggcg gcaccggcat tcgggccacg
    34201 gaacgacggg gtcaggccga cgttgggcag gttgggcacc agcacgtact gcgcgccggc
    34261 ctgcttgagc gcgccgacca gggcgatctg gtcggtcacg gccgcgccga tgatggcctg
    34321 cgcctgtgcc ggcgctgccg ctgccgcgaa caggtcgttg gcgccacccc agacggtata
    34381 cagggcattt gcgtcagcct tgccgccatt tgcagcgagg taacgagcag cctgcgactt
    34441 cagcgagggg atcggaccca gcgcaccgct gccttccacc gacacgcggg caccgcccac
    34501 ggcgtagttg tcaccgttct ggccgttgcc gttggctgcg ccgttgagac cgtagtaatt
    34561 ggccagctgc tgcgaccaga cccagcccgg gttggtggtg aactggccgg tgaccggctg
    34621 cacgccgggc ggcagcagcg ggcggaagta gccggcgtcg gtcaggctgt cgccgaagaa
    34681 caccgcgtgg gtatacgggg attcgcctgc catggccgga accgcggcca gcgcgatcgc
    34741 ggccgccatc agggagcgga tcgggcgttt gctgagcagc atgtaaagaa ctcctgtggg
    34801 gaaatcgttg aggacccggc ggacgtacgc cggcgcacgg tgaatggttt caccgcgccg
    34861 ccttttgctc acgctgcgcc gccgcatgga ttgtcgcccg gccctgcgcc agcgtgctgt
    34921 gcaggacgtg gcatctggcg cagattgcaa cggttccgat cccggcgggc tatcagcgac
    34981 aatgtgctga tgaacatcca gctcaacggc gaaccccgca ccctgcccgc ttcggcgacc
    35041 cttcacgatc tgcttgaggc agagcagctg ctgcagcgcc gggtggcggt ggaggtcaat
    35101 ggcgagatcg tcagccgcag ccgccacggc gagcatgtcc tggccgaggg cgacgtggtg
    35161 gagatcgtgc acgcgctggg cggtggttga ggtcattccg ggtagtgccg gccgccggcc
    35221 ggccatccga cgctgt
//
LOCUS       DAOKIP010000020        34928 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.020,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000020 DAOKIP010000000
VERSION     DAOKIP010000020.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 34928)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 34928)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..34928
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.020"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(24..890)
                     /locus_tag="QEL58_000899"
     CDS             complement(24..890)
                     /locus_tag="QEL58_000899"
                     /EC_number="4.2.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012478694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylglyoxal synthase"
                     /protein_id="HDS1675401.1"
                     /translation="MRIGLAANRLHHHDARAALFRWLRASESGLRELGVSLHAVGRTH
                     DAIGRQGFLAGYDGLHRYPYGREGGLMKLVAEVVGMGPERTLDGAIYLIDPVDPSSVF
                     PEATALKRQCVIHGKPFISTVATARDWVEVERIHAGLDADAGADDLHGFEGHTLALIA
                     HDAMKPAMLAFADEHFAVLARFGERVATGTTGQRLNELAWSRGWPSDTPWVTRYQSGP
                     MGGDAQIADRVLEGRCQRAIFFEDPHVARQHEADIQLLERAVTTVTDQAVCITAPRVA
                     ARWATAAALRAG"
     gene            1048..3468
                     /locus_tag="QEL58_000900"
     CDS             1048..3468
                     /locus_tag="QEL58_000900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008267301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HDS1675402.1"
                     /translation="MPAVNVVGFPAAAVMACLLLPATASASAARCGSPLRIAWPSDRA
                     PLSANVHGQASGPGADYLALLAAQRPLLPQPLPAVAVVEGRVPGNIQALLGWPRSQLP
                     PGWVASAPFLQLPQVIVRRRDAPPVLGMAALRGRTVASPDPEPLAALLAEQAPGAQLL
                     PPAPLDDALSLLGTGLVDAVIANLGEVEAALRRYRGDPLVIAAPAGFDDALVLATVPD
                     CAGVIDEFEQAVSSLSGARRQAMRAAWLPAVPRSQSSLSALHWLVPASLILLALALVY
                     AFGYWRVHRESERRRVAAQRLQEVTSNLPAVVFQARRSAEGHYSIPQIAGDVHALFGI
                     SVETALIDHRRLLAAVHPDDHARLTEAVDAAALAREPIDVLFRTQSPQGWRWVHSHGR
                     PLPRGGGVVEWSGYWMDVSEVQSRTLALAQARGEAEQVALAKTHFLATMSHEIRTPMS
                     TLLGMLERLADSDLDARQQQVLATVGDAARMLRQILDDVLHSQRLQPAPLQLRPTDLA
                     AMLRAVQQLLMPVAASRGLHLRIELDPALQAGLLADGLRLRQILFNLAGNALKFTEHG
                     SVDLQVRVLQHLEDGQRLRLQVSDSGVGISPERQQAVFAAYTQAETSTTRRFGGSGLG
                     LAICRELAASMGAELQLRSRPGEGTTVWMELDLAACEQPAEASPPPAAAVPALPPAWV
                     LVAEDHPTNLHLLEQRLRGLGLHVHACTDGRRALEAWQAWPFDLVITDCHMPDMDGFT
                     LARAIRADACAARARVPIIALTASVLDRTREACRDAGIEHFLAKPVEAPSLHALLAVL
                     LVPDSNRQ"
     gene            complement(3454..4899)
                     /locus_tag="QEL58_000901"
     CDS             complement(3454..4899)
                     /locus_tag="QEL58_000901"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005912482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HDS1675403.1"
                     /translation="MSRKHAFQFLDLPRTMPQRIPVELRTSGDWGELYGKFGKEDAQY
                     QAGRCLDCGNPYCSWKCPVHNAIPQWLQLVQENRIHEAATLCHSTNPLPEVCGRVCPQ
                     DRLCEGSCTLEEFGAVTIGAVEKYIVDTALASGWRPDLGAVQPTGQSVAVIGAGPAGL
                     ACADRLARAGITAVVYDRYEQIGGLLQFGIPSFKLDKDVIHRRREVLEGMGVQFRLGV
                     EIGRDVSVQQLLDSHDAVFVGTGAYRYTDGGLDGQDLKGVLPALPFLVQNSRIVGGDD
                     PKGRPIAGWEDTIALPDLNGKRVVVLGGGDTGMDCVRSAVRLGAAKVTCAYRRDEANM
                     PGSAREVANAREEGVRFLFNRQPLSIEAGADDEVIGVTVVETRLGEPDANGRQNAVPI
                     EGSESLLEADVVIIAFGFSPTLPAWLSEHGVEGRSNGRIVAGGKDRLPFQTAHPRLFA
                     GGDAVRGADLVVTAVAEGRDAAASIVRLLAV"
     gene            complement(4961..9415)
                     /gene="gltB"
                     /locus_tag="QEL58_000902"
     CDS             complement(4961..9415)
                     /gene="gltB"
                     /locus_tag="QEL58_000902"
                     /EC_number="1.4.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019237055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase large subunit"
                     /protein_id="HDS1675404.1"
                     /translation="MAPRNRQGLYDPRSERDACGFGMVAQLDDQPSRLLVDTAIAALS
                     RMTHRGGVAADGLTGDGCGLLLRRPDAFLKLLANEAGIVVAARFAAGLVFLPHDADAA
                     QACRTQLQAQVEAVGCKVAGWREVPTDDSVCGQLARDTLPRIEQVFVDAGIGQDDAGF
                     ALALFLARRRSEQQLRAHADFYVTTLTPDAISYKGMVLPDKLSRFYPDLQRRELASSA
                     IVFHQRFSTNTLPRWPLAHPFRMLAHNGEINTIEGNRRWAQARSKVWKTPRFDIAEFD
                     PVISMHGSDSQSLDNMLELMVAGGMELIQALRILVPPATQSLEFKDPDLAAFYEFHGL
                     NSEPWDGPAGIVACDSRYAVCTLDRNGLRPARWMLTADRHFLVASEAGVWEVPTERVV
                     RKGKLGPGEMVAIDLKRGDLLDSDAVDRINRGRAPYKQWLQQGVTYLQTELIDPSLVE
                     EPFDEGTLRSYHKLYQLSSEEVEQVLRPLAETEQEATGSMGDDTPMAVLSQRSRPLYD
                     YFRQAFAQVTNPPIDPLREDCAMSLSTQLGKETNIFHAGPETVNHVILNSPVLSQRKL
                     RQLLKMDQYVQANRLLDLSYSEDEGLRAGIERICAEAEQAARDGMVMLLLSDRYPVAG
                     RPMVHALLATSAIHHHLSQLGLRCDVNLIVETGTARDPHHMACLLGFGATAVYPYLAY
                     QTLFDLGRRGILKLSKGGEQSQIGRRYRKGVYKGLSKIISKMGICTVASYRGAQLFEI
                     IGLEPEVVDLCFPDTASRIGGAGFARLDADARELCAQAWDAQQDVDVGGLLKYVHGGE
                     YHMYNPDVVTTLQRAARSGDPRAWQQYCDAVHARPPSALRDLLQLVPAATPTPLDEVA
                     PASELFPRFDTAAISLGALSPEAHEALAIAMNRLGGRSNSGEGGEDPARYGTAKRSKI
                     KQVASGRFGVTAEYLVNAEVLQIKVAQGAKPGEGGQLPGHKVNELIARLRYARPGIGL
                     ISPPPHHDIYSIEDLAQLIYDLKQVNPTALVSVKLVSHAGVGTIAAGVVKAGADLITI
                     SGHDGGTGASPVSSIRYAGVPWELGVAEAHQALLANDLRGRTLLQTDGGLKTGLDVVK
                     AALLGADSFGFGTAPMIVLGCKYLRICHLNNCATGVATQDERLRENHFTGQPERVENF
                     FRLLAEEVRGWLSYLGARSLEEIVGRTDLLRQIEAAPRDGVRVDLSRLLADARYEGSH
                     CAAQRLYESPDSLATQMDGLLAPAIEHKRGGEHRFLIHNTDRSIGTRLAGAVARAHGN
                     QGMAEAPLELRFRGSAGQSFGAFNVGGLHLEVEGEANDYVGKGMAGGRLVVRPPRGAR
                     FEARSTAIIGNTCLYGATGGELFAAGRAGERFAVRNSGALAVVEGAGDHCCEYMTDGV
                     VLVLGKVGLNFGAGFTGGLAYVLDVDRDFVDRYNHELIDIHRVSAEGFENYRQHLHRL
                     IGRHRELTGSIWAQQILDEFRDYIGKFWLVKPKAASIESLTETLRRAA"
     gene            complement(9591..9980)
                     /locus_tag="QEL58_000903"
     CDS             complement(9591..9980)
                     /locus_tag="QEL58_000903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005407509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Elastase inhibitor AFLEI Flags: Precursor"
                     /protein_id="HDS1675405.1"
                     /translation="MSFPIRARSLSALLLPAVLALTACQAPALDEQDSATAHAQQAAE
                     AAKAPADDAGKATEAPPVGTCDASQVQSLVGQAYTDALGKQAQEDAGARQVRVLKPND
                     VATMEFLGDRLNIEVDDKGAVSGTRCG"
     gene            10092..11144
                     /locus_tag="QEL58_000904"
     CDS             10092..11144
                     /locus_tag="QEL58_000904"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IB"
                     /protein_id="HDS1675406.1"
                     /translation="MPKPSTPEQQAARAAGLRYVDDTQPGIGRRRAGKGFSYRDADGH
                     ALRDAATLQRIRALAIPPAYTAVWICAHANGHLQATGRDARGRKQYRYHADWAKERDA
                     GKFDRIIAFGEALPSLRRRLSRDLKRPGFPREKVLAMVVALLADTLVRVGNETYAQQN
                     RSFGLTTLRNRHLELLRGGRVRMRFRGKSGQLQEVTVGDRRLGLLVRRLQQLPGQALF
                     QYRDDDGALQPVDSGAVNDYLREVMGEDFTAKDFRTWGGTVAAVQTFAATELPEPASQ
                     RALAQAQRAVVCEVAALLGNTPAVCRKAYIDPCVFAGWERGELAKLAGLRGPRQWEQA
                     TLKVLRRARRLAKRSA"
     gene            complement(11178..11486)
                     /locus_tag="QEL58_000905"
     CDS             complement(11178..11486)
                     /locus_tag="QEL58_000905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014035473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675407.1"
                     /translation="MKHAIATATICFALAACSSAPMAQVQPIDGVISGQCHSDMVRGA
                     LGLAASDATVARARVDSDSLHVRVLRHDGPRVPPASEGGDRLTIEKGRTNNITAIYCG
                     "
     gene            11683..12789
                     /locus_tag="QEL58_000906"
     CDS             11683..12789
                     /locus_tag="QEL58_000906"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HDS1675408.1"
                     /translation="MATIKKTPARRKASPKVRKGSTASQTVADSDRPRVVKTATRKAA
                     ASDPRAARVAARQRRLQDQEKAKDVRAAKKATKKTATQAGARRQPEAMPAQQLAKPGH
                     EHELELAPRFLAPDYAGSGKLQGMRAIITGGDSGIGRAVAVLFAREGADVAVLHLDEA
                     EDADITRQHVEREGGRCVVIAGDVRDPRFCNKAVKQVAEAFGGIDILVNNAAFQLHCE
                     RLEDLEDAHLQETLQTNIGGYIQMARAVLPHLGEGASIINTGSETGIFGSKALIDYSA
                     TKGAIHAFTKALASQLLPRGIRVNCVAPGPVWTPLNPADKQAEDVAEFGKDSDMGRPA
                     QPEELSPAYVFLASPVCASYISGVILPVMGGPRG"
     gene            12858..13271
                     /locus_tag="QEL58_000907"
     CDS             12858..13271
                     /locus_tag="QEL58_000907"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675409.1"
                     /translation="MDGTAEYLWLPPGATPPERACSPCRAIVAVEAAVEADWQAPMSD
                     WLVRSGCRYMMAWGIECSGWDDAVDMASPEVECADFVMTTWHDRDTLAEVSAFCAIAQ
                     HSTLELPHTRVLHVAGVVDRARVLAGVQGAVAADA"
     gene            13351..14139
                     /locus_tag="QEL58_000908"
     CDS             13351..14139
                     /locus_tag="QEL58_000908"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675410.1"
                     /translation="MEDHNGVRTPCTMISLGRPFSRLASVPALLLAFAPFCMEASTFD
                     IGLDGKSPYPEHSCDQILELQRNSDGRMLLRDELDAFKAVLVEQGWPTYRTLGPALID
                     AAGKLLERSGLDCEFQKYMLRVLDQQVGDDIRPAIYARLADRIHASHNSSQLYGTLQQ
                     RLDDVATVDPPVASLGSLLFFRDFYGLPSLEEDLASCGIDYEVTLSQPPATYTWPDIR
                     TLLGELIQPDQSLRAALSAARSKGVSAKVELLKEEIAASDREGL"
     gene            14318..14512
                     /locus_tag="QEL58_000909"
     CDS             14318..14512
                     /locus_tag="QEL58_000909"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675411.1"
                     /translation="MQCWLTGFPLAEGEPQLYGTQMTLQNGVYVLQPTSDLDGLDKRR
                     SQMALGPYQAMLDSANASRP"
     gene            14896..16158
                     /locus_tag="QEL58_000910"
     CDS             14896..16158
                     /locus_tag="QEL58_000910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003477528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family efflux transporter periplasmic
                     adaptor subunit"
                     /protein_id="HDS1675412.1"
                     /translation="MSRHLFRREVMQAKGNRWLGRINMVQPIPLWLFTAFAACSAVSV
                     ILFIALGSYTKRARAMGQLVPVEGMSTVMAPASGVVSLLKVSEGENVRAGQVVAVLTV
                     PRATVGEGDTSAALEKRIRERVQGLKDVQAADQSQLDAQSDGLIAQVAAAQRELAQFK
                     EEIQTRSRQVVLAEETLSRLERLREGSYVSELQIKQQQTLALEQHASVQALQRQAITT
                     QRLIAQLQEAMRSLPQKREATRAGLRGALAQLEQEHVELLARGELVLTAPVDGTVVTQ
                     VLKPGQSVTMGQPLLSILPQDGRLEAGLLVPSRVIGFIDPGDRVLLRYQAYPYQKFGH
                     HEGTVQRVSRSALTGTELEMLMPGSTIQGEPMYRVTVALSSQEMDAYGRIERLKPGMT
                     LEADILGERSSLAEWIFAPLVARSKRIF"
     gene            16228..16836
                     /locus_tag="QEL58_000911"
     CDS             16228..16836
                     /locus_tag="QEL58_000911"
                     /inference="COORDINATES: protein motif:HMM:NF025043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2OG-Fe(II) oxygenase"
                     /protein_id="HDS1675413.1"
                     /translation="MELEQRERLGSVPDLGDVDVVDDLVPDELRRDILRLVRKPIWAY
                     GWKSVKSEDRFSFWHAHFAGGDKESRQGCLAELAANEAARPIHELWECLSQTVLAGHE
                     PLRVYANAHTYGVEGYVHTDNADKENYFTVVYYAHGIWHPNWSGETAFVVPETGDITH
                     AVYPRPGRLVVFRGATPHVARSPSRDCPELRITVVFKTQLAQ"
     gene            16833..17432
                     /locus_tag="QEL58_000912"
     CDS             16833..17432
                     /locus_tag="QEL58_000912"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675414.1"
                     /translation="MTLPVANMPERPSLQMLQEYLSLLRADQVPHSGRTLKDHLEGTG
                     RILREWGCDEAVCIAGMFHSIYGTNVFGFKRLGWSDRPLVGRMLGERAEHLVYLFCVS
                     DRPGAFLEALGTGIIRHRTSGESFSAGVDVCAALLEIESANLIEQGCGEQFLKRLSAW
                     VSAYPDLPLSVGLRSLLAGYAAAGKAPAAPGRPTAEELH"
     gene            17429..18016
                     /locus_tag="QEL58_000913"
     CDS             17429..18016
                     /locus_tag="QEL58_000913"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675415.1"
                     /translation="MNASSIRRKFAVDRFARLEQLVAAEVMDLYFQYAKSYARMPKYY
                     ELETETASLGRYADAMGEVLLAKLLPEVEDCVGKRLHATYSFLRFYTPESRLRRHTDR
                     TSCEYTLTLTVGSEGTRAPWPIMIETQEGVQAFDLAPGDGLLFSGRELPHWRECLPVG
                     TWLQLFLHYVDADGPHAANRFDGRKFLGPTRRSVA"
     gene            18013..19056
                     /locus_tag="QEL58_000914"
     CDS             18013..19056
                     /locus_tag="QEL58_000914"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675416.1"
                     /translation="MTVLINAGTHDTHAKAVVWGLRRKGTTVFHLASDRFCQTTAFSI
                     RVGAAQSGATLAIDGETVALDQLSAVWHRRPFEALQNAGVQPEDEVFARGESQLMREG
                     LYRSLELVPAVNPLDALVRAENKIHQLKHAAELGFQLPATLISGSPEDVRGFLAQHAE
                     CIYKPLRGHVWKSDSARRATYTAKVSEADLPADSLLRAAPGIYQARVEYAFEVRAQFF
                     GRQCAAIRIEQPTDGSLDWRRSQGTIDTCEVVDVPLDLQQRCHRLMEALGLVAAGFDF
                     LVTDDGRWIFLEINQAGQFLFVEQWCPGLPMLDMFCEFIRAPSLQWRYDMGHAHRRIS
                     YSEFIESTSVITS"
     gene            19149..19322
                     /locus_tag="QEL58_000915"
     CDS             19149..19322
                     /locus_tag="QEL58_000915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675417.1"
                     /translation="MKNEDIKKDLESRVLGHILSQEEMEQVGGGDGDGIPTLPPVKTT
                     PASDNGTTHPVLE"
     gene            19406..20401
                     /locus_tag="QEL58_000916"
     CDS             19406..20401
                     /locus_tag="QEL58_000916"
                     /inference="COORDINATES: protein
                     motif:HMM:NF015377.1,HMM:NF025024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2OG-Fe(II) oxygenase"
                     /protein_id="HDS1675418.1"
                     /translation="MQLEHSILKGHCPHLAIIDVAARLAGCSVQSSDVALLGAPRRYT
                     ETFSLQRAAGILGDLGIVSVAVRTDLGGLAQLRFPALAQVRSGTRQEFVVVSRIDDHA
                     IVYYSGRLGWQLDGLSSFSKRWTGVALTLEAAVRGPCRVGRDAALLSDLEIQLIQDFM
                     TVDECEELMASASPAFRKSMVSADGSLQSEVMSSGRTSESAACSGDLCARITDRAAEL
                     LGCASTLFEPIQCVRYEMGQKFAPHYDVPLDAGLPDQSTRAWTLLAYLNDGFEGGETL
                     FPAFDLSVRPLRGALLMFRNRGRQQRSVNPGALHAGQPVTRGSKYACNIWCSDAN"
     gene            20583..21566
                     /locus_tag="QEL58_000917"
     CDS             20583..21566
                     /locus_tag="QEL58_000917"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675419.1"
                     /translation="MDRQIAVLSAPAGGFKVVYAQYLRGDMDSSRLMQIRSSDGRLMD
                     QPEPLSFGSVLEDAPVLVHIDNDAWLYFAGSDADFSNITLWRARATPQGFGAPQRLPD
                     VPGLTQLVQAPRWVQAEGDLYLTFRGMGTGPRWMSMRNARSPSEFQGAASTPVAYPRV
                     VPLGQHGCFMSYQKAPEGGYMTTLYSVSPDCRTWSGPVELSPAKSPNKPDVHDGFALP
                     RQDGGVDIYYVYPSYKGASARFPVSFDLYRRAVDVQGRAGPEQLLTERLAYNPFAPSA
                     HRMPDGSVLVSFSDIEARGDAGVTKGRLTLFRISGDAPMEPERPGHRDSDS"
     gene            21621..23747
                     /locus_tag="QEL58_000918"
     CDS             21621..23747
                     /locus_tag="QEL58_000918"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010370257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase domain-containing ABC transporter"
                     /protein_id="HDS1675420.1"
                     /translation="MKVILQSESAECGLAALAMVADHHGQHGGLAVLRQRFNLSLKGL
                     RLDRLVQISQQIGFSARAIRVELEELGKLTTPCILHWDMNHFVVLKTVRASGIVICDP
                     AVGERKLSYREASEHFTGVVLELTPTAELKPVKRAPAISLQQLTGAVRGMWRSLAQVL
                     ILSLALQVFVVLAPFLLQWVVDQALVSADRDMLTVLGIGFGIALLLQVAINLLRGWSV
                     VYLSTHFGLQWTNNIFAHLMRLPLAFFEKRHLGDITSRLGSIREIRTVITTSFVEGII
                     DGLMAIMTFALMLIYSWELAMVTLCAVAVYAGARSLSYREFRNRTEQQLMVGARQQTH
                     LLESLRGIQSLKVAGQEPQRRAAHENLMVDTVNEELRLAQMGLGFTSINQLVFGIERI
                     AVIWIGALLAMSNVFTVGMLIAYLAYREQFSQRVGNLVDKWVEFRMLRLHGERLSDIV
                     LSEPEDCGEGIAPALPGEMGVEVENLSFRYGNGEPWIFRNCSFVVKPGESLALIGGSG
                     CGKTTLMKLMLGLLEPTEGSIRIGGQTLRGAGARRLREAIGAVMQDDQLFAGSIAENI
                     SFFQGAAEQERVEHAARLAAIHDDVMGMPMGYHSLIGDMGSTLSGGQKQRLILARALY
                     REPSVLFLDEATSHLDVANERLVNDAVDRLRLTRIIVAHRPETIERADRVMVVENADV
                     VLATRVRASNLRLKAAQSSGQVPESH"
     gene            24351..25442
                     /locus_tag="QEL58_000919"
     CDS             24351..25442
                     /locus_tag="QEL58_000919"
                     /inference="COORDINATES: protein motif:HMM:NF024098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3800 domain-containing protein"
                     /protein_id="HDS1675421.1"
                     /translation="MTTVYIDESGHSGDMINSGSAYDFKGQPYFSLAGIGLEDGHDWE
                     NRINEIRSRHRVPAGELKSKSLTAKPRFSAEVIHALLDQRAPLFIEVVDKRFFICTSI
                     TSFQLLPPCLGYPESVQFHFIRNTVADFLFFHASERVLDTFVASCLAPGDATLRASFA
                     MLRDMATDRGFTGSAAQIAQGVAHMVQEVEGEYAEQREKGGEAWSQFLPPPDLNKHGK
                     QVWMLPNLTSFTSIYARMNRYYGKRLAGIRLVHDQQLEVENILRQGKMTAENLSVSVD
                     LPYTPQSDYRFEEEASIEFAQSHEAIGVQLADIVAGTVMRYFRDTDAGTPVSSELREA
                     IMRLIGEGDERSGYGLNQVVATANVRHAE"
     gene            complement(25498..26412)
                     /locus_tag="QEL58_000920"
     CDS             complement(25498..26412)
                     /locus_tag="QEL58_000920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675422.1"
                     /translation="MTLACWSSPKHPTAKCWRNCSSSPSRSRLYVELRNNQNLNGGSR
                     LSLPPTNRLLRFFFADAATAVKNGLEAAVGESVCRRLDEDKHLVNQLNEPFGSYQEVG
                     RLQCPINSGITLFEIMVHEGIHQGLQDHMWLHYFGHFAKRILKQMSGAPDEEVYQEWP
                     TPFHYLLARLVGVAADWSEQCARVDDSEVPKETRCADHFDRHYISKEATKVLGTMLQG
                     IIPSEKLSASFKSDLLEIVIRSYVRLQSNLKTADVAASFLNAVIVGSDMKTEAVYRQE
                     LRNLFRGLDHILSGKASAFETALDASLT"
     gene            26908..27534
                     /locus_tag="QEL58_000921"
     CDS             26908..27534
                     /locus_tag="QEL58_000921"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675423.1"
                     /translation="MGYGIEEWKSRIAQRSDFTTSLVHLTRDAATDSALDVLIKILSD
                     KKLVGSTTASGFIVGSTPAVCLQESPIYSLAQNIYTEQSYRKQNPSAKKRYLGVGLQF
                     AKAEVFLKGGRPVIYERTATAKAFLPPDEWWRIVNFDLTTSSAIVDWSHEREWRVPNE
                     LSFELNQVAVLLPNSKTYHRFVKRCLAMSRPDFLTDTRGIVQLSSVFY"
     gene            27689..28747
                     /locus_tag="QEL58_000922"
     CDS             27689..28747
                     /locus_tag="QEL58_000922"
                     /inference="COORDINATES: protein motif:HMM:NF027613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4935 domain-containing protein"
                     /protein_id="HDS1675424.1"
                     /translation="MPNYPHRVFVDANIWISWGPLFKRAEASTLEELVEHGIVKVVST
                     DLTITEVAKRFGNSDVERLEPLTKPDLSQAAKQLLNMELPVMDKDDMRASFFARHLAS
                     VKFQLGQRMRAEIRSIDSVRPNEVLAHYTRGTGLFSAQVKKDQFPDAFIFAAITADVS
                     SEKQLIIWSSDGDFTQACDEGEYLTQVKTMPQLFEVLGIAPEGDAMVALLEQANEMFV
                     VPLEDALIDAEVEALDVDEALLEVQQVLRVDALSISSLYRISGEDNQYIGFGRCEPAV
                     TVSFVAPDWSSAVWDSEDRRPIAVDSIEGEAEIELDEFGFSFLAEIRNSQVISIRELE
                     RKGRWALTARLFDGFRRR"
     gene            29249..30286
                     /locus_tag="QEL58_000923"
     CDS             29249..30286
                     /locus_tag="QEL58_000923"
                     /inference="COORDINATES: protein motif:HMM:NF016159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoid-associated protein"
                     /protein_id="HDS1675425.1"
                     /translation="MGFLTDDERQQLRIQNMILHVVGDGEFEPQPAREVEHAHFFLSR
                     IRDTDAAPVHEFRNRSRTRDSLARIATGAVGFEEGAQALSDTFSGQHRNTARDGAFFI
                     FELRVDDPAVLIYSLIKYDYREAIEQAVEEDGQQRLRQIVHAFIDDKKAIQKSALVRI
                     VGGAAEAQVSARDRTKTSPDIADYFSAFLEVDRTRSDEELNRALLETLRQVMVDSADL
                     LPNNDAASALSAAKAHLRDRQQIDQDAIIESVIAAAGHPDEEVQIVLRHRITRKLQSQ
                     RLTGLAFPPDRQVLRRPPIRRIRTTEGVTVTYPDGVTVARARREDGPGEIITITTDRI
                     VEETIVREGSR"
     gene            30270..31760
                     /locus_tag="QEL58_000924"
     CDS             30270..31760
                     /locus_tag="QEL58_000924"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675426.1"
                     /translation="MKALADAIDHLVQAGGVFVRESSDGAMVSNLTERDTDALKALCS
                     DIGWGYAVLDAAGEQVDGDRPTPEGLGPYRLHVRKPPSEQGVLRLLTLSGLRDALRDD
                     DQSPVWSVAGFTGRIATGLRMIQGWDEAELPKQEPPTKSPRRLVREYTQARRVPVDLR
                     FWLSEELDGYTFDQPAARLWVQAAMAALTACLPNEIDPDEGTLKFRGPPRLELYPFRA
                     AEEGIERDLFNGLLRALKWTFENGREAELKHTLLAGELARSGSSNEDVVEFLRTHLEH
                     SLESAEIAYQMTLSETGRDTIKILGELRKTVSDETAKLADMSRQLTGAVSAAVATGIG
                     LIAARVAANAPTLLIIAVVGVVLVYIAMIIASGIRYMRLQRSLRGEWQHRLYRFLPAR
                     EYATLVTSPTKKAEDSFRTTAYLGAIAVLILSVACAWFAFSPQSDVDSKPEQGLPLPE
                     VSSQANGRQAAASKEVPSKVPVVLHNGGEREPEVIRSETGDQAPPK"
     gene            31902..32270
                     /locus_tag="QEL58_000925"
     CDS             31902..32270
                     /locus_tag="QEL58_000925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675427.1"
                     /translation="MPDSPSEKPNDLKGGAIRTFTRIAEAWSLGESEQRQILALSELP
                     QSGDERLVDDLVLMRIGQIISIYRALHTIFRDPKQANSWIHRDNAAAIFCCEPAIKLM
                     CSGQAGALEAVRDYLEAQRD"
     gene            32546..32932
                     /locus_tag="QEL58_000926"
     CDS             32546..32932
                     /locus_tag="QEL58_000926"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005421039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BlaI/MecI/CopY family transcriptional regulator"
                     /protein_id="HDS1675428.1"
                     /translation="MRGKTIGDQELALLQYIDEHAPASVGEVASGYGEARGLARSTVL
                     TMMERLRAKGYLQRRQQDGIYRYQATRGPESVLQGAVAQFVDNTLQGSVSPFVAYLSQ
                     RQQVSDNELAELEALVAQLQSRRHEG"
     gene            32936..>34928
                     /locus_tag="QEL58_000927"
     CDS             32936..>34928
                     /locus_tag="QEL58_000927"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transmembrane BlaR protein"
                     /protein_id="HDS1675429.1"
                     /translation="MDTTMLIPLLERLGWTSLQTVLLVALVYGVCRALPSLSAATRCR
                     LWWLVSLQAVLGLFWSQPLQLAWLPAPQAVAMTATDVAADMIYPLAPEASAQLLAAMP
                     MPAADVPAVAWWAVALAALWVSGVLLMAWRTFGEWRQCRALLAAAYPCQDEALVQALQ
                     LASEAHGVRPAPRLWMSTQVDSPQLVGPFRPVLLLPAGDNALQGDALDLALTHELQHL
                     QRRDLQWGLLPALAQHLFFFHPLLRLSVREYAQAREEAVDAAVVGQHGASRQAYGRLL
                     LQLGVAPQPHLGVASAAPSTTSLKRRLMSLQPRRACPRILAMALTAVVLVVGVAPMRL
                     VAAPVPPAPPAPPAAPKAVVPPPPKAPKAPPAPPSSARVPAVPVAPAPPAEPAGVEAL
                     SGPDDADVAVDVDADVDVDTGMHSQHTTSRTTSITTYGRLDLGKSPPQAFVLVDGDST
                     FANGGMDDVTVARRQLGKGPALWFRQGDKRYVVRDPMMIQTLQRAYSGAADLGRQQSE
                     LGRQQSALGRQQSELGKQMGEMGRLQGEEARRMALAAAEAARSAMAAHDINREAAAEA
                     AKAARGATNDAAVAREAAREAAAEARRAMQEVDNETARASHTRGMQRLASQQSELASR
                     QAALGSQQAALGERQARVHEQASRQAQQVIARALASGKAE"
BASE COUNT         6268 a        10669 c        11435 g         6556 t
ORIGIN      
        1 tcagccgttg gccgaaacct ccatcacccc gcccgcagcg ccgccgccgt cgcccagcgt
       61 gccgccaccc gcggcgcggt aatgcacacc gcctggtcgg tcaccgtggt caccgcccgc
      121 tccagcagct ggatgtccgc ctcgtgctgg cgcgccacgt gtgggtcctc gaagaagatc
      181 gcgcgctggc agcggccttc cagcacgcgg tcggcaatct gcgcatcgcc gcccatcggg
      241 ccgctctggt agcgcgtcac ccagggcgtg tcactgggcc agccgcggct ccaggccagt
      301 tcattcaagc gctgcccggt ggtgcccgtc gccacgcgtt cgccgaatcg cgccagtacc
      361 gcgaagtgct cgtcggcgaa ggccagcatc gccggcttca tcgcatcgtg ggcgatcagc
      421 gccaacgtat gcccttcgaa gccgtgcagg tcatcggcgc cggcgtctgc atccaggccc
      481 gcatggatac gctccacctc cacccagtcg cgcgcagtgg ccacggtcga aatgaacggc
      541 ttgccgtgga tcacgcactg tcgcttcagt gcagtggctt ccggaaacac ggacgacgga
      601 tcaaccgggt cgatcagata gatcgcacca tccagcgtcc gctccgggcc catgccgacc
      661 acctcggcca ccagcttcat caggccgcct tcgcgtccgt agggatagcg gtgcaggccg
      721 tcgtacccgg ccaggaatcc ctgccgcccg atcgcgtcat gggtgcggcc gaccgcgtgc
      781 agcgatacgc cgagttcacg cagtccggac tcactggcac gcaaccagcg gaacagcgcc
      841 gcccgcgcgt cgtggtggtg gagacggttg gcagccaggc cgatgcgcat cgaaagctcc
      901 gcaggtacgg gtgaaagcgg cagtgtatgt cggcattagc cctgccggat gcatttgcaa
      961 ctttcttcat tgccgcctgc tgacacgccg ctagcgtggc aggcagcggt accgctgtgc
     1021 ggccgtttct cccgccggcg aatgaggatg cctgccgtga acgtcgttgg gtttcccgcc
     1081 gctgccgtca tggcatgcct gctgctgcca gccactgcct ctgcctctgc cgcacgttgc
     1141 ggctcgccgc tgcgcatcgc ctggccatcc gaccgcgcgc cgttgtccgc caatgtgcat
     1201 ggacaggcga gcggacccgg cgcggactac ctggcattgc tggctgcaca gcgcccgttg
     1261 ctgccgcagc cgctgccggc cgtcgcggtg gtcgagggca gggtgcccgg caacatccag
     1321 gccctgctgg gctggccacg ttcgcagctg cccccgggct gggtggccag tgcccccttc
     1381 ctgcagttgc cgcaggtgat cgtacggcgc cgggatgcgc cgccggtgct gggaatggcg
     1441 gcgctgcgcg ggcgcaccgt ggccagtccg gaccccgagc cgttggccgc gctgctggcc
     1501 gaacaggcac ccggcgcaca gctgcttccc ccggcaccgc tcgatgacgc gctctcgctg
     1561 ctgggcaccg gcctggtcga tgcggtgatc gccaatctcg gtgaggtcga ggccgccctg
     1621 cggcgctacc ggggagatcc actggtcatc gctgcaccgg ccggcttcga cgatgcgctg
     1681 gtgctggcca cggtgcccga ctgtgcgggc gtcatcgatg agttcgagca ggcagtgtcc
     1741 agtttgagtg gcgcacgacg ccaggcgatg cgtgcggcct ggttgccggc ggtgccgcga
     1801 agccagtcgt cactttcagc actgcactgg ctggtgccgg cctcgctgat cctgctggcg
     1861 ctcgcgctgg tgtacgcgtt cggctattgg cgcgtgcacc gcgaaagcga gcgacgccgc
     1921 gtggccgccc agcggctgca ggaggtgacc tcgaatctgc cggcggtggt gttccaggcg
     1981 cgtcgctcgg cagaaggcca ctacagcatt ccgcagatcg caggggatgt acatgcgctg
     2041 ttcgggatca gcgtcgagac cgcgctgatc gatcatcggc gtctgctggc cgcggtccac
     2101 cccgacgatc atgcgcggct cacggaagcg gtcgatgcgg ccgcgctggc gcgcgagccg
     2161 atcgatgtcc tcttccggac gcagtcgccg cagggctggc gttgggtgca ttcgcatgga
     2221 cgaccgctgc cgcgtggtgg cggcgtcgtc gagtggagtg gttactggat ggatgtcagc
     2281 gaagtgcagt cgcgcaccct tgcgctggca caggccagag gcgaggccga gcaggtggcg
     2341 ttggccaaga cccacttcct ggcgacgatg agccacgaga tccgtacgcc gatgagcacc
     2401 ctgctgggga tgctggaacg gttggccgac agcgacctgg atgcgcgcca gcagcaggtg
     2461 cttgccacgg tgggcgatgc ggcgaggatg ctgcggcaga tcctcgacga tgtgctgcac
     2521 agccagcgcc tgcagcctgc gccattgcag ctgcggccga ccgatctggc ggcgatgctg
     2581 cgggcagtgc agcagctgct gatgcctgtt gcggccagcc ggggcctgca tctgcgcatc
     2641 gaactcgatc cggcgttgca ggccgggctg cttgctgatg gcctgcgcct gcgccagatc
     2701 ctgttcaatc ttgccggcaa cgcgctgaag ttcaccgagc acgggagcgt ggacctgcag
     2761 gtgcgggtgc tgcagcactt ggaggatggc cagcggctgc gcctgcaggt gagcgacagc
     2821 ggtgtgggca tcagtccgga acggcagcag gcggtgttcg ccgcctacac ccaggccgag
     2881 acgtcgacga cgcgccgctt cggcggaagt ggcctgggcc tggcgatctg ccgcgaactg
     2941 gcggcgtcga tgggcgccga actgcagctg cgcagcaggc ccggcgaggg cacgacggtg
     3001 tggatggagc tggacctggc ggcctgcgag cagcctgcgg aggcatcacc gccgccggcc
     3061 gcagcggtgc cggcgctgcc gcccgcctgg gtgctggtgg ccgaagacca tcccaccaac
     3121 ctgcacctgc tggagcagcg cctgcgcggc ctggggctgc atgtgcatgc ctgcacggat
     3181 ggccgcaggg ccctcgaggc ctggcaggcg tggccgttcg atctggtgat caccgactgc
     3241 cacatgcctg acatggacgg attcacgctg gcgcgcgcga tccgcgccga tgcctgtgca
     3301 gcccgtgcgc gggttccgat catcgcgctt accgccagcg tgctggacag gacgcgcgag
     3361 gcctgccgcg acgccggcat cgagcatttc ctggccaagc cggtggaagc gccgtcgctg
     3421 cacgcgctgt tggccgtgct gctggtgccc gactcaaacc gccagtaggc gcacgatgct
     3481 ggcggcagcg tcgcggcctt cggccacggc ggtcaccacc aggtcggcgc cacgcaccgc
     3541 atcgccgccg gcgaacaggc gtggatgcgc ggtctggaac ggcaggcggt ccttgccacc
     3601 ggccacgatg cggccgttcg accggccttc cacgccgtgc tcggacaacc acgccggcag
     3661 cgtcggcgag aagccgaacg cgatgatcac cacgtccgct tccagcagcg attcgctgcc
     3721 ctcgatcggc accgcgttct ggcggccatt ggcatcgggt tcgcccaggc gggtctcgac
     3781 cacggtcacg ccgatcactt catcatcggc accggcttcg atcgacagcg gctggcggtt
     3841 gaacaggaaa cgcacgccct cctcgcgcgc gttggccact tcgcgcgcgc tgccgggcat
     3901 gttggcctcg tcgcggcggt aggcgcaggt gaccttggcc gcgcccagcc gcaccgcgct
     3961 gcgcacgcag tccatgccgg tatcgccgcc gccgagcacc accacgcgct tgccgttcag
     4021 atcgggcagg gcgatggtgt cctcccagcc ggcaatcggc cgacccttcg gatcatcgcc
     4081 gccgacgatg cggctgttct gcaccaggaa cggcagcgcc ggcagcacgc ccttcaggtc
     4141 ctggccgtcc aggccgccat cggtgtagcg gtaggccccg gtgccgacga acaccgcatc
     4201 gtggctgtcc agcagctgct gcacactgac atcgcggccg atctccacgc ccaggcggaa
     4261 ctgcacgccc atgccctcca gtacttcgcg gcggcggtgg atcacgtcct tgtccagctt
     4321 gaagctggga atgccgaact gcagcaggcc gccgatctgt tcgtagcggt cgtagaccac
     4381 ggcggtgatg ccggcgcgcg ccaggcggtc ggcacaggcc aggccggccg ggccggcacc
     4441 gatcaccgca acactctggc cggtgggctg caccgcgccc aggtcggggc gccagccgct
     4501 ggccagggcg gtatcgacga tgtacttctc caccgcgccg atggtcaccg cgccgaattc
     4561 ctccagcgtg cagctgcctt cgcacaggcg gtcctgcggg cagacgcggc cgcacacttc
     4621 cggcagcggg ttggtgctgt ggcacagcgt ggccgcctcg tggatgcggt tttcctgcac
     4681 cagctgcagc cactgcggga tggcgttgtg caccgggcac ttccagctgc agtacgggtt
     4741 gccgcagtcc aggcagcgtc cggcctggta ctgggcgtct tccttgccga acttgccgta
     4801 cagctcgccc cagtcgccgg aggtgcgcag ttccaccggg atgcgctgcg gcatggtgcg
     4861 gggcaggtcg aggaactgga aggcgtgctt gcggctcatg gctggctctg gaatgcgagg
     4921 ggggacgttg ccggccagcg gccggcacta ccgggcaaaa tcacgcggcg cggcgcaggg
     4981 tttcagtcag cgactcgatg ctggcggcct tgggtttgac cagccagaac ttgccgatgt
     5041 aatcgcggaa ctcgtcgagg atctgctgcg cccagatgct gccggtcagc tcgcggtggc
     5101 ggccgatcag gcgatgcagg tgctggcgat agttctcgaa gccctcggcc gacacgcggt
     5161 ggatgtcaat cagctcgtgg ttgtagcgat cgacgaaatc gcggtccacg tccagcacat
     5221 aggccaggcc accggtgaag ccagcgccga agttcaggcc gaccttgccc agcaccagca
     5281 ccacgccgtc ggtcatgtat tcgcagcagt ggtcaccggc accttccacc accgccagcg
     5341 cgccggaatt gcgcaccgcg aagcgctcgc cggcacgccc agccgcgaac agttcgcctc
     5401 cggtggcgcc gtacaggcag gtgttgccga tgatggcggt gctgcgtgcc tcgaagcgcg
     5461 cgccgcgcgg cggtcgcacc accaggcggc cgccggccat gcccttgccg acgtagtcgt
     5521 tggcctcgcc ttccacttcc aggtgcaggc cgccgacatt gaaggcgccg aagctctgcc
     5581 cggcactgcc acggaagcgc agctccagcg gtgcttcggc catgccctgg ttgccatgcg
     5641 cgcgggccac cgcaccggcc aggcgggtgc cgatgctgcg gtcggtgttg tggatcagga
     5701 accggtgttc gccaccgcgc ttgtgctcga tggccggggc cagcaggcca tccatctgcg
     5761 tggccaggct gtccggcgat tcgtacaggc gctgcgcggc gcagtggctg ccttcgtaac
     5821 gggcatcggc cagcaggcgc gacaggtcca cgcgcacgcc atcgcgcggc gcggcctcga
     5881 tctgccgcag caggtcggtg cggccgacga tttcctccag cgaacgcgca cccaggtacg
     5941 acagccagcc acgcacttcc tcggccagca ggcggaagaa gttctccacg cgctcgggct
     6001 ggccagtgaa atggttctcg cgcaggcgct cgtcctgggt ggccacgccg gtggcgcagt
     6061 tgttgaggtg gcagatacgc aggtacttgc agcccagcac gatcatcggc gcggtgccga
     6121 agccgaagct gtccgcaccc agcagcgcgg cctttaccac gtccaggccg gttttcaggc
     6181 caccatcggt ctgcagcagg gtgcgcccgc gcaggtcgtt ggccagcagc gcctggtgcg
     6241 cttcggccac gcccagttcc cacggcacgc cggcatagcg gatcgagctg accggcgagg
     6301 cgccggtgcc gccgtcatgg ccggagatgg tgatcaggtc cgcgccggcc ttgaccacgc
     6361 cggccgcgat cgtacccacg ccggcgtggc tgaccagctt caccgacacc agcgcggtcg
     6421 ggttgacctg cttgaggtcg tagatcagct gcgccaggtc ttcgatggaa tagatgtcgt
     6481 ggtgcggcgg cggcgagatc aggccgatgc cggggcgcgc atagcgcagg cgcgcgatca
     6541 gttcgttgac cttgtggccg ggcagctggc cgccttcgcc gggcttggca ccctgcgcga
     6601 ccttgatctg cagcacttcg gcattgacca ggtattcggc ggtgacgccg aagcgccccg
     6661 aggccacctg cttgatcttg ctgcgcttgg cggtgccgta gcgtgcgggg tcctcgccgc
     6721 cttcgccgga attgctgcgc ccaccgaggc ggttcatggc aatcgccagc gcctcatgcg
     6781 cttccggtga cagcgcaccg aggctgatcg ctgcggtatc gaagcgcggg aacagttcgc
     6841 tggccggtgc cacttcatcg agcggcgtgg gcgtggcggc cggaaccagc tgcagcaggt
     6901 cgcgcagtgc cgacggcggc cgtgcatgca cggcatcgca gtactgctgc caggcacgcg
     6961 gatcgccact gcgcgccgcg cgctgcaggg tggtcaccac gtccgggttg tacatgtggt
     7021 actcgccgcc gtgcacgtac ttcagcaggc cgccgacatc cacgtcctgc tgcgcgtccc
     7081 aggcctgcgc gcacagctca cgcgcgtcgg catccagccg cgcgaaaccg gcgccaccga
     7141 tgcgcgaggc ggtatcgggg aagcacaggt cgaccacctc cggttccagg ccgatgatct
     7201 cgaacagctg cgcgccgcgg tagctggcca cggtgcagat gcccatcttc gagatgatct
     7261 tcgacaggcc cttgtagacg cccttgcggt agcggcggcc gatctgcgac tgctcgccgc
     7321 ccttgctgag cttgaggatg ccgcggcggc cgaggtcgaa cagggtctgg taggccaggt
     7381 acgggtacac cgcggtggca ccgaagccga gcaggcaggc catgtggtgc gggtcgcgcg
     7441 cggtgccggt ctcgacgata agattcacgt cacagcgcag gcccagctgc gaaaggtggt
     7501 ggtggatggc gctggtggcg agcagggcgt gcaccatcgg ccgaccggcc accgggtagc
     7561 ggtcggacag cagcagcatc accatgccgt cgcgcgcggc ctgttcggct tcggcacaga
     7621 tgcgctcgat accggcacgc aggccttcgt cctcgctgta ggacaggtcg agcaggcggt
     7681 tggcctgcac gtactggtcc atcttcagca gctggcgcag cttgcgctgg ctgagtaccg
     7741 gcgagttgag gatgacgtgg ttcaccgtct ccgggccggc atggaagatg ttggtctcct
     7801 tgccgagctg ggtggacagg gacatcgcgc agtcttcgcg cagcgggtcg atcggcgggt
     7861 tggtgacctg cgcgaaggcc tggcggaagt agtcgtagag cggacggctg cgctggctga
     7921 gcaccgccat cggcgtgtca tcgcccatcg agccggtagc ttcctgttcg gtctcggcca
     7981 gcggccgcag cacctgctcc acctcttcgc tgctgagctg gtagagcttg tggtagctgc
     8041 gcagggtgcc ttcgtcgaag ggctcttcca ccagcgacgg atcgatcagt tcggtctgca
     8101 ggtaggtcac gccctgctgc agccactgct tgtacggtgc gcggccgcgg ttgatgcggt
     8161 ccaccgcgtc ggagtcgagc aggtcgccgc gcttgaggtc gatggccacc atttcgccgg
     8221 ggccgagctt gcccttgcgc accacgcgct cggtgggcac ttcccacacg ccggcttcgg
     8281 aggcgaccag gaagtggcgg tcggcggtca gcatccagcg cgccgggcgc aggccgttgc
     8341 ggtcgagggt gcatacggca tagcggctgt cgcaggcgac gatgccggcc gggccgtccc
     8401 acggctcgct gttgaggcca tggaactcgt agaacgcggc caggtccggg tccttgaact
     8461 ccagcgactg ggtggccggt ggcaccagga tgcgcagcgc ctggatcagc tccatgccgc
     8521 cggcgaccat cagctccagc atgttgtcca ggctctgcga gtccgagccg tgcatggaga
     8581 tcaccggatc gaactcggcg atgtcgaagc gcggcgtctt ccacaccttg ctgcgtgcct
     8641 gcgcccagcg ccggttgcct tcgatggtgt tgatctcgcc gttgtgggcg agcatccgga
     8701 acgggtgggc cagcggccag cgtggcaggg tgttggtgga gaagcgctgg tggaacacga
     8761 tcgcgctgga ggccagttcg cggcgctgca ggtccgggta gaagcggctg agcttgtccg
     8821 gcagcaccat gcccttgtag ctgatcgcat ccggggtgag cgtggtgacg tagaagtcgg
     8881 catgcgcgcg cagctgctgt tcgctgcgac ggcgcgccag gaacagggcc agcgcgaagc
     8941 cggcgtcgtc ctggccgatg ccggcgtcga cgaacacctg ttcgatgcgc ggcagcgtgt
     9001 cgcgcgccag ctggccacag acgctgtcgt cggtgggcac ctcacgccag ccggccacct
     9061 tgcagcccac ggcttccacc tgcgcctgca gctgggtgcg gcaggcctgc gcggcgtcgg
     9121 catcgtgcgg caggaacacc aggccagcgg cgaagcgcgc ggcgacgacg atgccggctt
     9181 cgttggccag cagtttcagg aaagcatcgg ggcggcgcag cagcaggccg caaccatcgc
     9241 cggtcaggcc gtcggcggcg acgccgccac ggtgggtcat gcgcgaaagc gcggcgatgg
     9301 cggtatcaac caacaggcgc gaaggttgat cgtcgagctg ggcgaccatg ccaaatccac
     9361 aggcatcgcg ctcggagcgc gggtcgtaaa gcccttggcg gttgcggggg gccatctcta
     9421 cctcgatgcg gaatgaattg aacggggaca ctcaagcccg cccaatccct ggagcgcatc
     9481 gtgaggccac cggatgcctc gactagatca caggttgctg caacgccgca atacacggtt
     9541 gcaggtgcaa cagaaagcgc cggcacgccc gtgccggcgc ggggccggac tcagccgcag
     9601 cgcgtgccgc tgactgcgcc cttgtcgtcc acttcgatgt tgaggcggtc gccgaggaac
     9661 tccatcgtgg ccacgtcgtt gggcttgagc acgcgcacct gcctggcgcc ggcgtcttcc
     9721 tgggcctgct tgcccagcgc gtcggtgtag gcctggccga ccaggctctg cacctggctg
     9781 gcgtcgcagg tgccgaccgg cggcgcctcg gtcgccttgc cagcgtcgtc ggccggcgcc
     9841 ttggcggctt cggcggcctg ctgggcatgg gcggtggccg aatcctgttc atccagcgcc
     9901 ggtgcctggc aggcggtcag ggccagcacg gccggcagca acagggcgga gagcgaacgg
     9961 gcgcgaatcg ggaacgacat catgactccg gaaggggttg tgaagacccg agcatagcgg
    10021 cgaaccgacc ctcacgtgtt tgtcttgcgt tatcgacagg atcaccgcgc cgcacccgcg
    10081 acactcagcg catgccaaag ccctccactc cggaacaaca ggccgcgcgt gccgccggcc
    10141 tgcgctatgt cgatgacacc cagcccggca tcggccgccg ccgcgccggc aagggcttca
    10201 gctaccgcga tgccgacggc cacgcgctgc gtgatgccgc caccctgcaa cgcatccgtg
    10261 cgctggccat cccgccggcc tacaccgcgg tatggatctg cgcacatgcc aacggccacc
    10321 tgcaggccac cggtcgcgat gcgcgtgggc gcaagcagta ccgctaccac gccgactggg
    10381 cgaaggagcg cgacgccggc aagttcgacc gcatcatcgc ctttggcgag gccctcccct
    10441 cgctgaggcg gcggttgtcg cgcgatctca agcggccggg tttccccagg gaaaaagtgc
    10501 tggcgatggt ggtggcgctg ctggccgaca ccctggtgcg ggtcggcaat gaaacctacg
    10561 cacaacagaa ccgctcgttc ggactgacca cactgcgcaa ccgccatctg gagctgctgc
    10621 gtggcgggcg ggtgcgcatg cgcttccgcg gcaagtccgg gcagctgcag gaggtgaccg
    10681 tgggcgaccg caggctgggc ctgttggtgc ggcgcctgca gcagctgccg gggcaggcgc
    10741 tgttccagta ccgcgatgac gacggtgcgc tgcagccggt ggattccggc gcggtgaacg
    10801 actacctgcg cgaggtgatg ggcgaggact ttaccgccaa ggatttccgc acctggggcg
    10861 gcaccgtggc ggcggtgcag accttcgccg ccaccgagct gccggaaccg gccagccagc
    10921 gcgcgctggc ccaggctcaa cgggcggtgg tgtgcgaggt ggcggcgttg ctgggcaaca
    10981 cgccggcggt gtgccgcaag gcctatatcg acccgtgcgt gttcgccggc tgggaacgcg
    11041 gcgaactggc caagctggcc ggcctgcgtg gcccgcgcca gtgggagcag gcaacgctga
    11101 aggtgctgcg ccgggcgcgg cggttggcca agcgcagcgc ctgaaccctc ggtagcgtcg
    11161 agctcgctcg acggctgtta tccgcagtag atcgcggtga tgttgttggt gcggcccttt
    11221 tcgatggtca ggcggtcacc gccttcgctg gccggcggca cccgcggacc gtcatgacgc
    11281 agcacccgca cgtgcaggct gtcgctgtcc acgcgtgcac gcgcaacggt ggcgtccgaa
    11341 gcggccaggc ccagcgcacc gcgcaccatg tcgctgtggc actggccgga aatcacgccg
    11401 tcgatcggct gcacctgggc catgggcgcg ctgctgcagg cggcgagggc gaagcagatg
    11461 gtggcggtgg cgattgcatg tttcatggag gcgttccttg tgtggttgcg tgcagcctgc
    11521 ggcggcgcac gtagtggcgg aatgaatacc gtgcacatcg tggacacggc gtattcactg
    11581 ctgccgaaag caggggtgga gacactgcag gagcggcatg cgccgccccc ggtagtgccg
    11641 gccgctggcc ggcagcccct ttccctcccg aggagaccct gcatggccac catcaagaag
    11701 acccccgctc gccgcaaagc ctcgcccaag gtgcgcaagg gcagcaccgc aagccagacc
    11761 gtcgccgatt ccgatcgccc gcgcgtggtg aagaccgcca cccgtaaggc ggccgccagc
    11821 gatccacgcg cagcgcgcgt cgcggcccgg cagcggcgcc tgcaggacca ggagaaggcc
    11881 aaggacgtgc gcgcggcaaa aaaagcaacg aagaagaccg cgacccaggc cggtgcgcgc
    11941 cggcaaccgg aggcgatgcc ggcgcagcag ctggccaagc ctgggcatga acacgaactg
    12001 gagctggcgc cgcgtttcct tgcaccggac tacgccggca gcggcaagct gcagggcatg
    12061 cgcgcgatca tcaccggtgg cgattctggt atcggccgtg cggtggcagt actgttcgca
    12121 cgcgaaggcg ccgatgtggc ggtactgcat ttggacgagg ccgaggacgc ggacatcacc
    12181 cgccagcacg tggagcgcga aggcggtcgc tgcgtggtga tcgccggtga cgtgcgcgat
    12241 ccgcgcttct gcaacaaggc ggtcaagcag gtggccgagg cgttcggcgg catcgacatc
    12301 ctggtcaaca acgccgcgtt ccagctgcat tgcgagcggc tggaagacct ggaagacgcg
    12361 catctgcagg aaaccctgca gaccaacatc ggcggttaca tccagatggc gcgcgcggtg
    12421 ctgccgcacc tgggcgaggg tgccagcatc atcaacacag gatcggaaac gggaatcttc
    12481 ggcagcaagg cgctgatcga ctactcggcc accaagggcg cgatccatgc gttcaccaag
    12541 gcgctggcca gccagctgct gccacgtggc atccgggtca actgcgtggc gccggggccg
    12601 gtgtggacgc cgttgaaccc cgccgacaag caggccgaag atgttgcgga gttcggcaag
    12661 gacagtgaca tggggcggcc cgcacaaccc gaagaactgt cgcccgccta tgtgttcctg
    12721 gcttcgccgg tctgtgccag ttacatcagc ggggtgatcc tgccggtgat gggcggtccg
    12781 cgcggctgac gcggcggcgg tgccggccgc tggccggcag ctatcctcgg cgcatgcgaa
    12841 cagaggatgg ggtgggcatg gacggcaccg ctgaatacct gtggctgccg ccgggcgcca
    12901 caccgcccga acgggcctgc tccccttgcc gggccattgt tgctgtcgaa gccgccgtgg
    12961 aggcggactg gcaggcgccg atgagcgatt ggctggtgcg cagcggttgc cgctacatga
    13021 tggcctgggg cattgagtgc agcggttggg atgatgcggt ggacatggca tcgccggagg
    13081 tcgagtgcgc cgacttcgtg atgaccacct ggcatgatcg cgacaccctg gcggaggtgt
    13141 cggcgttctg cgccattgcc cagcactcta cgctggagct gccgcacact cgggtgttgc
    13201 atgttgctgg ggtggtcgac cgggcgcgcg tgcttgcagg tgttcagggc gctgttgcag
    13261 cagatgcgta aagatcggcg atgcgcggaa tgaaccgctg cggttggcgc gtgggagctg
    13321 catactcggc ccaccgggca gaaacgccac atggaagatc acaacggagt tcgcactccc
    13381 tgcacgatga tcagcctcgg cagacccttc agtcgcttgg ccagtgtccc tgcgctactg
    13441 ctggctttcg cacccttctg catggaagca agcacttttg acatcggcct tgatggaaaa
    13501 agcccttacc cggagcactc atgcgaccag atactggagc tccagagaaa ctctgatggc
    13561 cgaatgctgc ttcgcgatga actggatgca ttcaaggcgg tgctggtcga gcagggctgg
    13621 cccacctatc gcaccttggg gccagccctg attgatgcgg ccggcaagct gctggagcgc
    13681 tctggcctgg attgcgagtt ccagaagtac atgcttcgcg ttcttgatca gcaagtcggc
    13741 gatgacatcc gtcctgcaat ctatgcacgg cttgcggatc gcatccatgc ttcccacaat
    13801 tccagccaac tgtacggcac cctgcagcag cggctcgatg atgtggctac ggttgatccg
    13861 ccagtagcct cgttgggctc cctgctgttc ttccgtgact tctacggtct gcccagcctg
    13921 gaggaggacc tggcctcgtg cggcatcgat tacgaagtga ccttgtcaca gccaccggcg
    13981 acgtacacct ggcccgacat ccggacgctg ctcggtgagc tgatccagcc cgatcaatcc
    14041 ttgcgggcag cgctgagcgc tgcccgcagc aagggcgttt cagcaaaggt cgagctgctc
    14101 aaggaggaga tcgctgcctc cgatcgagaa ggcctgtgaa ggatcaagca ggtattcgaa
    14161 ggcgtaggct ttccgacgcg ggacatggcg ggcattgatg gtgtctctag ggccttcctc
    14221 ctggtccagc acgcggatga ggatccagcg ttccagaggc gtgcgttgga gctggccaaa
    14281 ccattgatgg agtcacgcgg catgtcgcga cgccagtatg caatgctggc tgaccgggtt
    14341 tcccctggca gaaggcgagc cgcaactgta cggcacgcag atgacccttc agaacggcgt
    14401 gtacgtgctg cagcctacgt ccgatcttga tggtctggac aagcgtcgat cgcagatggc
    14461 gcttggccct tatcaggcga tgctcgatag tgccaacgcc agtcgtcctt gattgaaatg
    14521 ttgcgccaac atcctgggct tccagtgttg aagtatccag ttgatctgca gcatcgaatt
    14581 gaagtttcga ggggattcct tggcagacat gtggctggag gtggcggccg ggcgcgcctg
    14641 cttgcttgca gatgttcagg gcgctgttgc gaaatactcg cagcgcaatg cgcacttttg
    14701 atgtggagaa cgtgatcgcg cggacacgcg gaatccgcaa attcacacac agaaggagtg
    14761 aatgcattgg atcattttca tgaacacgcg aaatgtgacg aggttatcga tgtcgcaatt
    14821 gccttcactc aagtgttgac gtgatgcgct cgatgatcga taaaaaggcc caacgcaacg
    14881 ggaaaggatg ccccgatgtc acgacatctt tttcgcaggg aagtgatgca ggcgaaggga
    14941 aatcgttggc tgggccgcat caacatggtg cagccgattc cgctttggct gtttaccgcc
    15001 ttcgctgcct gctcagctgt ttccgtcatt ctcttcattg cacttggcag ttatacaaag
    15061 cgtgcccggg ccatgggaca gcttgtccct gtcgaaggca tgtccactgt catggcaccc
    15121 gcaagcggtg tcgtctctct tctcaaggtc agtgagggag agaatgtgcg tgcaggtcag
    15181 gtggttgccg tgctcaccgt gccaagggca acggttggcg aaggtgatac ctccgccgca
    15241 ttggagaagc gcatccgcga gcgggtccag ggattgaagg atgtgcaggc tgcggatcaa
    15301 tcccagctcg atgcacaaag tgacggtctc attgcgcagg tggctgcggc gcaacgcgag
    15361 ctggcgcagt tcaaggagga aatccagaca agaagcaggc aggtcgtact ggccgaagag
    15421 acactctcgc ggctggagag actgcgcgaa ggcagttacg taagcgaact gcagatcaag
    15481 cagcagcaga cactggcgct tgaacagcat gccagtgtgc aggccctgca gcgccaggca
    15541 atcacaacac aacgactcat agcgcagttg caggaggcca tgcgctcgct gccgcaaaag
    15601 cgtgaagcca ccagagccgg tctgcggggc gcattggccc aacttgaaca ggaacacgtc
    15661 gagctgctcg cacgaggtga gctggtgctt accgcgccgg tggatggaac ggttgtcacg
    15721 caggtgctga agccgggcca gtcggtgacc atgggccaac ctctgctgag tatcctgccg
    15781 caagacggcc gtctggaagc tggcctgctg gtgcccagtc gtgtcatcgg cttcattgat
    15841 cccggcgatc gcgtactgct gcgttaccag gcgtacccct atcagaaatt cggtcaccat
    15901 gagggaacag tgcagcgcgt cagccgcagc gcgcttactg ggacagagct ggaaatgctg
    15961 atgcccggct cgacgatcca aggcgaaccg atgtacaggg tcaccgtcgc actctccagt
    16021 caggagatgg acgcttacgg tcgcatcgag cgactcaagc ccggcatgac acttgaagct
    16081 gacatccttg gcgagcgcag cagcttggcc gaatggatct ttgcgccact ggtcgcacga
    16141 agcaaacgga tcttctagag aaggtcacct ccactcaacc cgtcctgccg ttgaaaccga
    16201 acgggcggac acgcagagga agcagcgatg gaactagagc agcgggaaag gcttgggagc
    16261 gtaccggatc tgggcgatgt cgatgttgtc gatgacctgg taccagacga acttcggcgc
    16321 gacatcctgc gactggtccg taaacccatc tgggcgtatg gatggaagtc ggtcaagtct
    16381 gaagaccgct tcagcttctg gcatgcgcat tttgccggag gcgacaagga aagccgtcag
    16441 gggtgcctgg ccgaacttgc tgcaaacgaa gctgcacgac cgatccacga gctgtgggag
    16501 tgcctgtcgc agacggtgct ggccggccat gaaccccttc gtgtgtacgc caatgcccat
    16561 acctacggcg tggagggcta tgttcataca gacaatgcag acaaggaaaa ttacttcact
    16621 gtcgtctact acgcccacgg aatctggcat cccaactggt cgggcgagac agctttcgtg
    16681 gtgccggaga cgggtgacat cacccatgct gtctacccgc gacctgggcg cctggtggtg
    16741 ttccggggcg ccacgccaca cgttgcacgt tcacccagcc gggactgtcc cgagctgcgc
    16801 atcaccgtcg tgttcaagac ccagctcgca caatgacctt gcccgtcgcc aacatgccgg
    16861 agcggccctc cctgcagatg ctgcaggagt acctgtcact cctgcgcgct gaccaggtgc
    16921 cgcactcggg gcgaacgctg aaggatcatc tggaaggaac gggccgcatt ctgcgggagt
    16981 ggggatgcga cgaggcggta tgcatcgctg gcatgttcca cagcatctac ggaacgaacg
    17041 tgttcggatt caagcgtctt gggtggagtg atcggccgct ggtgggtcgg atgctgggcg
    17101 aacgtgccga gcatttggtg tatctgttct gcgtcagtga tcggcccggt gcgttcctcg
    17161 aagcgctggg taccggcatc attcgccaca gaacaagcgg cgaaagcttc agtgcgggcg
    17221 tggatgtctg tgcggcgttg cttgagatcg aatccgccaa cctcatcgag cagggatgcg
    17281 gcgagcagtt cctgaagcga ctgtccgcat gggtgagcgc atatccagac cttccgctga
    17341 gcgttggcct gcgctcgctc cttgctgggt acgcggcggc tggaaaggcg cccgccgccc
    17401 ctggcaggcc gacagcggag gaactccatt gaacgcttca tccatccgtc ggaaatttgc
    17461 agttgaccgt tttgcgcggc ttgagcagct ggtggcggca gaagtgatgg atctctactt
    17521 ccagtatgcg aagagctatg cgcgcatgcc gaagtactat gagctggaaa cagaaaccgc
    17581 gtcgctgggg cgatatgccg acgccatggg cgaggtgctg ctggccaaac tgttgcctga
    17641 ggtggaagac tgtgtaggaa agcggctgca tgccacttac tcgttcctgc gcttctacac
    17701 gcctgaatcg aggctgcgca gacacactga ccgcacatcc tgcgaataca cgctgacctt
    17761 gaccgttggc agcgaaggta cacgggcgcc ctggccgatc atgattgaga cccaggaggg
    17821 tgtgcaggcg ttcgacctgg ctccaggtga tgggctcctg ttctccggac gtgagctgcc
    17881 ccactggcgc gaatgcctgc cagtgggaac ctggctccag ctcttcctgc attacgtcga
    17941 tgcagacggg ccgcatgcag cgaaccggtt cgatggacgg aaatttctcg gaccgacgag
    18001 gcgatcagta gcatgactgt tctcatcaat gctggaacgc acgatacaca cgccaaggcc
    18061 gtcgtttggg gcttgcggcg caaaggaacg accgtgtttc atctggcgag cgacaggttc
    18121 tgccagacaa cggccttcag catccgcgta ggggctgcgc aaagtggtgc cacgctcgcg
    18181 atcgacggag aaaccgtagc ccttgatcag ctgtcggcag tgtggcatcg ccgcccgttt
    18241 gaggcgctgc agaacgctgg cgttcaacca gaggatgagg tgttcgcccg aggcgaatcg
    18301 caactgatgc gcgaggggtt gtatcgatcc ctggagcttg tcccggcagt gaatccattg
    18361 gatgcccttg tccgggccga aaacaagatc catcagctga agcacgcggc cgagcttggc
    18421 ttccagcttc cggccacgtt gataagcggc tcacctgagg atgtccgagg tttccttgcc
    18481 caacacgcgg agtgcattta caagccgcta cgcggccatg tctggaagtc cgattctgct
    18541 cgacgcgcga cctacaccgc caaggtcagc gaagcagatc tcccggcgga ttcactgctg
    18601 cgcgccgccc caggcatcta tcaggcccgc gtggaatatg ctttcgaagt cagggcgcag
    18661 tttttcggcc gccagtgcgc tgcgatccgt atcgagcagc cgacggatgg cagtctcgac
    18721 tggcggcgca gccagggcac gattgacacc tgcgaagtgg tggatgtccc gctcgacctg
    18781 cagcaacgct gccatcgtct gatggaagcg ctcggcctcg tggcggcggg gttcgatttt
    18841 ctcgttacgg acgatgggcg ctggatcttc cttgagatca atcaggccgg acagttcctt
    18901 ttcgtcgaac agtggtgccc tggattgccg atgctggaca tgttctgtga gttcatccgt
    18961 gcaccgtcgc tgcagtggcg atacgacatg ggacatgcgc atcgccggat ctcctattcg
    19021 gaattcatcg agagcacttc agtgattacg tcctgacccc ggcaggtggg acgtcaaccc
    19081 attgcgtcag gcgcctggcg tgatccaccg acaacactcc tgttgtcgaa aatcgaggag
    19141 aaaatggcat gaagaacgaa gatatcaaga aggatctgga gtcgcgcgtg cttggtcaca
    19201 ttctttccca ggaagaaatg gagcaggtag gcggcggcga tggcgatgga attccgacgc
    19261 tcccgccggt gaagacgacg ccggccagtg acaacggaac cacgcatccg gtccttgagt
    19321 aactgaatac ggcgagtgct gcgatgcctg gccgtcaagg tgggcgtcgc ggcctcgctt
    19381 ttccggagaa cggagctgaa gcgcaatgca gctggagcat tccatcctga agggccattg
    19441 cccgcacctg gcaatcatcg acgttgccgc tcggctcgcg gggtgctcag tgcagtcttc
    19501 tgacgtcgcg ctgctgggcg caccccgcag gtacacggaa actttctccc tgcagcgagc
    19561 tgcaggcatc cttggtgatc tgggcatcgt cagtgtcgcg gttcgcaccg acctcggcgg
    19621 attggcacaa ctgcgatttc ccgccctggc ccaagtgcgg tccggtacac gccaggagtt
    19681 cgtcgtagtg agccgcatcg acgatcatgc gatcgtctac tacagcggcc gcctgggatg
    19741 gcagttggac ggcctgagtt cgttttccaa gcgctggaca ggcgtagctc tcacccttga
    19801 ggctgctgtc cgtgggcctt gccgcgtagg tagggacgca gcgctgcttt cagatcttga
    19861 gattcaactc atccaggatt tcatgacggt ggacgaatgc gaggaactca tggccagcgc
    19921 gtcacctgcg ttccgcaaga gcatggtcag tgcggatggc agcttgcaga gtgaggtcat
    19981 gtccagcggc cgcacaagtg aatcggcggc ctgctcgggg gacctgtgtg cccgcatcac
    20041 cgatcgcgcg gcggagctgc ttggctgtgc gagcacgttg ttcgagccga tccagtgcgt
    20101 caggtatgag atgggacaga agttcgcccc acactatgat gttcccctgg atgcaggact
    20161 gccagatcag tccacgcgcg catggacact tcttgcgtac ctcaacgacg ggttcgaagg
    20221 cggggaaacc ctctttcctg ccttcgacct gagtgtgcgc cctcttcgtg gcgccctgct
    20281 catgttccgt aaccgtggcc gacaacagcg aagcgtcaat ccgggtgcgc tgcatgcggg
    20341 ccaaccggtg acccgcggga gcaagtatgc ctgcaatatc tggtgttcag atgccaatta
    20401 gatgcctgat cgcggtcttc tttctgttcc atgcagccgt cgcccccgcc ttggccgatg
    20461 ctgctccaag cctgcctccg gttgcgcaac atccagtgtc atcgaagcca atggtgcttc
    20521 cgaaggccac ggaactgcct gtcggccccg cgggcacctg gcggtctcca gtgtctaacg
    20581 gcgtggatcg gcagatcgcg gtactgagtg cgcccgccgg cggattcaaa gtggtgtatg
    20641 cgcagtatct ccgcggcgac atggactcat cacggctgat gcagatccgg tcctctgatg
    20701 gtcgcctcat ggaccagcct gagccgctgt cgtttggttc agtgctggag gatgctccgg
    20761 tgctcgttca catcgataac gatgcgtggc tctactttgc aggcagtgac gctgatttca
    20821 gcaatatcac gctttggcgc gcgcgggcca cgccgcaggg gtttggggcg ccacagcggc
    20881 tgccggatgt cccgggactg acccagctgg tccaggcacc tcgatgggtg caggcagaag
    20941 gcgatctcta tctgacattc cgtggaatgg gaaccggtcc tcgctggatg tcgatgcgca
    21001 atgcccgatc accatcggag tttcaggggg cggcatcgac acccgtggcg tatccgcgcg
    21061 tggtgccgct gggccagcat ggctgcttca tgagttatca gaaggcgccc gaaggtggct
    21121 acatgacaac gctgtacagc gtcagccccg actgcagaac ctggtccggc cctgtggagc
    21181 tttcgccggc aaagtctccg aacaagccgg atgtccacga cgggttcgcg ctgcctcgac
    21241 aggacggcgg cgtggacatc tactatgtct acccttccta caagggcgcc tcagcgcggt
    21301 ttcccgtcag tttcgatctg tacaggcgcg cagtggatgt gcagggcagg gcaggtcccg
    21361 agcagctcct gacggaacgg cttgcctaca atccattcgc tccttccgcg catcgaatgc
    21421 cggatgggtc tgtcctggtc tcgttctcgg acatcgaggc gcgcggcgat gctggtgtga
    21481 ccaagggacg actgacgctc ttccggattt ccggagatgc gccgatggag cctgagcgcc
    21541 ctgggcaccg cgacagtgac agctgacgtg atcgtgtcgt ccgtcatgcc cctttcccgg
    21601 caatccaagc ggctgcgcac atgaaggtca tcctgcagtc tgaaagcgcc gaatgcgggt
    21661 tggccgcatt ggcgatggtg gctgaccacc atggccagca cggtgggctg gccgtgctgc
    21721 gccagcggtt taatctttcg ctgaaagggc tgcgtctgga tcggctggtt cagatctccc
    21781 agcagattgg cttttcggcg cgcgcgattc gagtcgaact cgaagaactg gggaagctga
    21841 cgactccgtg catactgcac tgggacatga accatttcgt ggttctgaaa acggtgcgtg
    21901 catcagggat cgtcatttgt gatcccgccg tcggtgagcg gaaactcagc taccgcgagg
    21961 catcggagca ctttaccgga gttgtgctgg agctgacacc gacggccgag ctcaagcccg
    22021 tgaagcgcgc accggcgatc agcctgcagc aattgactgg cgcggtgcgc ggcatgtggc
    22081 gctcgttggc ccaggttctg attctgtcgc tggcgttgca ggttttcgtc gtgctggcgc
    22141 cattcctgct gcaatgggtg gtggatcagg cacttgtctc ggcggatcgt gacatgctca
    22201 ccgtcctcgg gattggattt ggcatcgccc tgcttctgca ggttgcaatc aacctgctgc
    22261 gtggctggtc tgtggtctat ctttccacgc atttcggatt gcagtggacg aacaatattt
    22321 tcgcccacct gatgcgtctg ccgttggcat tcttcgagaa acgtcacctt ggtgacatca
    22381 cctcacgcct tggctccatc cgtgagatca ggacggtcat caccaccagt ttcgtggagg
    22441 gcatcattga cggtctcatg gcgatcatga ccttcgcgct gatgctcatc tactcatggg
    22501 aactggcgat ggtgacgctg tgtgccgtgg ccgtctacgc gggtgcccga tctctgtcct
    22561 accgtgagtt ccgtaatcgg accgagcagc agctgatggt cggtgcccgg cagcagacgc
    22621 atctgctcga gtcactccgc ggtatacaga gcctgaaggt agcgggtcag gagccgcagc
    22681 ggcgtgctgc ccacgagaat ctgatggttg acaccgtcaa cgaagagttg aggttggccc
    22741 agatgggcct gggctttacg agcatcaacc agctggtgtt cggcattgag cggatcgccg
    22801 tgatctggat cggtgcgttg cttgcgatgt caaatgtgtt caccgtcggc atgctgatcg
    22861 cttacctcgc ataccgggag cagttttcgc agcgtgtcgg caatctcgtc gacaagtggg
    22921 ttgagttccg gatgctgcgc ctgcatggtg aacgtctgtc ggacatcgta ctgtccgagc
    22981 ccgaggattg cggagaggga atcgccccgg ccttgcccgg tgagatgggc gtggaggttg
    23041 agaatctttc cttccgctat ggcaacggtg agccctggat attccgcaac tgcagttttg
    23101 ttgtgaagcc aggggaatcg ttggcgctca tcggtggatc aggatgcggc aagacaacgc
    23161 tcatgaagct catgctcggt cttcttgagc ctacggaggg aagtatccgc attggtggac
    23221 agacgctgcg cggcgctggc gctcggcgcc tgcgtgaagc catcggcgcg gtaatgcagg
    23281 atgaccagct tttcgccggc agcattgcag agaacatatc cttctttcag ggagctgccg
    23341 aacaggagcg tgtggagcac gcggcgcggc tggcggcgat ccatgacgat gtaatgggca
    23401 tgcccatggg ctatcacagc ctgataggcg acatgggaag cacattgtcc ggcgggcaga
    23461 agcagcggct tattcttgcc agggcgcttt accgtgagcc cagcgttctg tttctggacg
    23521 aagcgacaag ccatcttgat gtcgccaatg agcgtctggt aaatgatgct gtcgatagac
    23581 ttcgtctgac gcggatcatt gtcgcccatc gccccgagac aatagagcgg gcagatcggg
    23641 tgatggtggt tgaaaacgcc gacgtcgtgc tggcgacccg agtgcgagcg agcaatctca
    23701 ggctgaaggc tgcgcaatca tccggacagg taccggagag ccactgagca cgtggctttg
    23761 gatcccgtta tcccttgatg ctggatttgg cttgcatcag tgtgcactgc gctaaagatt
    23821 gacgccgaat tccattaaag tttggcgcgc taaaggctgg catcgcccca atccatcaca
    23881 agtttttgaa atgtataggg tttgtcaagt ttcatggaaa tgaggcgcag gttttagatc
    23941 gcatctagcc cctcctgact tggcctaagg tctctgaccc gcccagaagt aggtcaaatg
    24001 ccgcctggcc caagttcgta gaattggata ccgtcggcct gtgcgctcag atgcagcgag
    24061 atcgggtcta tcgcatgggt tggccagcaa gcggcgcagg aggggttctc catagttcaa
    24121 cctcgtcggc gtcaccgttt gggctctcgg gcaaaagatc cgcgtcctcc caatgaagag
    24181 ccagtcgccg gaagacttcc aaagcgacct gtcccaagag taggggcacc gcagatattg
    24241 agcgaggcgt gcccagcgtg agcgcacccg atccatagcg ctgggtcggg tgcgcattca
    24301 aaatacgcta tacatccgaa catgaatcat ctcaggggca gcatcgagac atgaccaccg
    24361 tctatattga tgaaagcggc cacagtgggg acatgatcaa cagcggtagc gcttacgact
    24421 tcaagggcca accctacttt tccttggccg gcattggtct tgaagacggt catgactggg
    24481 aaaaccgcat caatgagatc cgaagccgcc accgagttcc tgcaggcgaa ctgaagtcca
    24541 agtcgctgac cgccaagcca aggttttcgg ccgaagtcat ccatgccttg ctcgaccagc
    24601 gcgccccact tttcatcgag gtggtcgata agcgcttctt tatctgtacc agcatcacct
    24661 cgttccagct cttgccgccg tgtcttggct atcccgagtc agtgcaattt cacttcatca
    24721 ggaacacggt ggcggacttc ctgttctttc acgcctccga gcgcgtcctc gatacatttg
    24781 tcgcgtcgtg cctggcgccg ggggacgcga ctctgcgcgc ctcattcgca atgctgcgcg
    24841 acatggccac agatcggggc tttaccggat cggccgcaca aatcgcgcag ggcgttgccc
    24901 acatggtgca ggaagtggag ggcgagtacg ccgagcagcg cgagaaagga ggcgaggcct
    24961 ggtcgcagtt tcttccgcct cccgatctca ataagcatgg aaagcaagtc tggatgctgc
    25021 caaacctgac gtcattcacg agcatctacg cccggatgaa tcgctactat ggcaagcgct
    25081 tggccggcat ccgcttggtg cacgaccagc aattggaagt ggagaacatt ctgcgccaag
    25141 gcaaaatgac cgccgaaaac ctgagcgtct ccgtggatct gccttatacc ccacaatccg
    25201 actaccggtt cgaggaagag gctagcatcg aatttgcgca gtcacacgag gccatcggcg
    25261 ttcaactggc cgacatcgtt gccggcaccg tgatgcgcta ctttcgagac acggacgcag
    25321 gcacacccgt gtcgagtgaa ctgcgcgagg ccatcatgcg actcatcggc gagggcgatg
    25381 agcgaagtgg ctatggcctc aatcaagtcg tcgcaacggc taacgtccga catgcagaat
    25441 gagtgctaca gccgtggtgt cgtctgccat gacgcctctt tctgaacgta acggagatca
    25501 agtcagtgag gcgtccagcg ctgtctcgaa ggcagatgcc ttgccactca gaatatggtc
    25561 caaacctcgg aacaaattcc taagctcctg tcggtagact gcttccgtct tcatatccga
    25621 accgacgatc acggcgttca ggaatgacgc ggcaacatct gccgttttca gattgctctg
    25681 gagccttaca tagctgcgaa tgacgatttc cagcagatcc gatttgaatg acgctgacag
    25741 cttctcactc ggaatgatgc cttgcagcat tgtccccagt accttggtag cttccttgga
    25801 gatgtagtgg cgatcgaaat gatcagcaca acgggtttcc ttgggcactt cggaatcatc
    25861 cacgcgtgca cactgttcag accaatccgc agcgacgccg accagccggg cgagaaggta
    25921 gtggaagggc gttggccact cctgatagac ctcttcgtcg ggcgcgccag acatctgctt
    25981 gaggatcctt ttggcgaagt gcccaaagta gtgcagccac atatggtctt gcagcccttg
    26041 gtggatgcct tcgtgcacca tgatctcaaa gagtgtgatg cctgaattga tcgggcactg
    26101 gagccgcccc acctcctggt aggagccaaa cggctcgttg agctggttga ccaggtgctt
    26161 gtcttcgtcc aatcgacggc acacagactc gccgacggca gcctccaggc cgttcttcac
    26221 cgccgtggct gcatcggcaa agaagaagcg aagcagccga ttggttggcg gcaggcttag
    26281 gcggcttccg ccattgaggt tctgattgtt cctcagctcg acgtagagcc ggcttcgcga
    26341 cggggatgac gagcaatttc tccagcactt cgccgttggg tgcttcggtg aagaccagca
    26401 agccaaggtc atgacttcat ccggcgtcgg ggtgggcgta tctatagagg ccatagtgcg
    26461 cctgatatga cctgaatggc agagaagagt gttgagctaa ggtccaatgg gggccagatc
    26521 caaggactcc caggcaatcg cctgctcctc agtgacgctg aactcgcgtc tgtgcccggc
    26581 agcggctcat ctggaagggt gagccgcgcc cacccatcca tccgatctgg tcgcccactg
    26641 gttcctcagc atccacaggt cgctagcttg gctgcagcgg cacggcaggt acgtcgaggt
    26701 gacaacgtat tcggcacaga tcagatcagc caagattggc agcgcgaaat tcagtgctgt
    26761 gagatacaga accaaagttc tcataagaat gagagtgagc gggcagttcg cagctacctt
    26821 ggcgggatgg atttccaatc aggcagcggt gtataagtcg actggtgaaa gccgcgtggc
    26881 ccgtggctag ctatacagga cgatgttgtg ggatatggaa ttgaagaatg gaagtcgcga
    26941 attgcgcagc gtagtgattt cacaaccagc cttgtccatc taacgcgcga tgctgccacc
    27001 gatagcgccc tagatgtgct catcaagatc ctgagcgata aaaaactagt aggaagcacg
    27061 acagcttctg gcttcatcgt aggctctact ccggctgtat gccttcaaga gtcgccgatc
    27121 tattcgctgg ctcaaaatat ctacactgag cagtcataca ggaagcagaa cccgtccgcg
    27181 aaaaagcgct acttaggagt tggtctgcag ttcgcaaaag ctgaggtctt cttgaagggc
    27241 ggaaggccag tcatctacga gagaacggcc accgccaagg cctttcttcc tccagatgag
    27301 tggtggcgta tcgtcaattt cgatttgacg acgtcatcgg cgatagtgga ctggagccat
    27361 gagcgagagt ggcgagttcc taacgagctt tcctttgagc tcaatcaagt cgcagtgctg
    27421 cttcccaatt caaagacgta tcacaggttt gtgaagcgat gcttggccat gagtaggccc
    27481 gattttctca ctgacactcg aggtatagtg cagctatcct ccgtattcta ttgacgtagt
    27541 agaggtacac ccgttgccac tgtcgaaagg atcgtcaggg ttaagacgag gccggaggcg
    27601 gccgacggat ccacgtcccg aacggagccg ccagctgacg cgaagagctg acgcggcctt
    27661 atctcagtag aacttcagag tctgccgtat gcctaactat ccgcaccgag tttttgttga
    27721 tgccaacatc tggatcagct gggggccact ctttaagcga gcggaggcgt cgacactgga
    27781 ggagcttgta gagcatggga tcgtcaaggt tgtctccact gacttgacca tcaccgaagt
    27841 tgccaagcgc ttcggaaact ctgacgtgga acgactcgag cccctgacca agcctgatct
    27901 tagccaagca gcgaagcagc tgctgaacat ggaactccct gttatggaca aggacgacat
    27961 gcgtgcttcg ttcttcgcgc ggcatttggc gtctgtgaaa tttcagctcg gtcaacgcat
    28021 gcgggctgag atccgaagta ttgacagtgt gagaccaaac gaagtcctgg cacactacac
    28081 gcgcggaact ggcttgttca gcgctcaggt gaagaaggat caatttcccg acgccttcat
    28141 cttcgccgca atcacagcgg atgtcagttc ggagaagcag ctcatcatct ggtcgagcga
    28201 tggagacttc actcaagctt gtgatgaggg cgagtacctc actcaagtaa agaccatgcc
    28261 tcaactcttt gaggtgctgg gcatcgcgcc ggaaggtgac gcgatggtcg ctctgcttga
    28321 gcaagccaat gagatgttcg ttgttcccct cgaggatgcg ctcatcgacg cggaggtaga
    28381 ggccctagat gtggacgagg cacttctgga agtccagcag gtcctgcgag tcgatgcttt
    28441 gtctatttcc tccctatacc gcattagcgg agaggataat cagtacatcg gattcggcag
    28501 atgcgaacct gctgtgactg taagcttcgt cgctcctgac tggagctctg ccgtttggga
    28561 cagcgaggac aggaggccaa tagcggtcga ttcgatcgag ggagaggctg agatcgaact
    28621 ggacgagttt ggtttcagct tcctggcaga gatcaggaac agccaagtca tcagcatccg
    28681 ggaactggag cgcaaaggtc gctgggcgct gactgcacgt ctatttgatg ggttcagacg
    28741 ccgatagtcc ttgcctcatt gagtcccgtg ctgtcgtaag agagctccac gaacctagcc
    28801 caataggttc attgactgat cacgtcgttg ggtctaccaa gaacgtatct atcaagaatg
    28861 cacagttgat ggagcctgcc tggagcactt tcatctcctg gggcgggatg ctcgatcagc
    28921 tctgttcgcg tggtcttgat tcccactcta ggccgacgtc agctcaactg tgctcttgct
    28981 caaaagtccg ctcctcgttc catgacgtcc tctactgcct atagcggctc catcattgcc
    29041 tgccaatgac actgtccagc atacgggtcc gcacttaggg caccggagct gaaggtctca
    29101 gggggggcgt aggctgaaga tagtcagcaa gcagtgccac gcgcaaaaaa aaacaggtaa
    29161 tctccgcccg tgcgacgcac cgggcataag gtggaccagt cttcggctca ggtgcgcgac
    29221 aggaaccagg ggaaaaggag ttatctagat gggttttctc actgacgatg agcgtcagca
    29281 gctgcgcatc caaaatatga tccttcatgt ggtgggtgac ggggagttcg agccccagcc
    29341 cgcacgagaa gttgagcacg cgcacttttt cttgtcccgt attcgggata ctgatgccgc
    29401 cccggtacat gagttccgga atcgatctag aacccgtgat tcattggcga gaattgccac
    29461 tggagcggtt ggatttgagg aaggtgcaca agcgctttcg gatacattct ctggacaaca
    29521 ccgcaatact gcgcgtgacg gtgctttctt catttttgag ctgcgagttg atgatccagc
    29581 tgtcctcatc tacagcttga tcaagtacga ctaccgcgag gcaattgagc aggcagtaga
    29641 ggaagatggg cagcagcgtc tgagacagat cgtgcatgcc ttcatcgacg acaagaaggc
    29701 aattcaaaag tcggctctgg ttcgcatcgt gggtggcgct gcagaagcgc aggtctcggc
    29761 tcgggatcga actaagacat ccccggatat tgccgactac ttttctgctt tcctggaggt
    29821 ggaccgtacc cgcagtgacg aagagctaaa tcgtgcgctt ctggagacct tgcgccaagt
    29881 catggtcgat tccgctgact tgcttccgaa caatgacgcc gcctccgcct tgagtgcagc
    29941 aaaggcccac ctgcgtgata ggcagcagat cgatcaggac gcgattatcg agtccgtcat
    30001 tgcagcagcg gggcatccag acgaggaggt gcagatcgtt ctacgccatc gaattacgcg
    30061 caagctgcag tcccagcgtc tgacaggttt ggcctttccg ccggatcgcc aggtactccg
    30121 ccgccccccc atccggcgga ttcgtactac cgagggtgtg acggtcacct atcccgatgg
    30181 ggtgaccgtc gctcgcgcac ggcgcgaaga tggccctggc gagatcatca caatcacgac
    30241 cgacagaatc gtcgaggaga caattgtccg tgaaggctct cgctgacgcc attgatcatc
    30301 tcgtccaggc gggcggtgtg ttcgtgcgcg agtcctctga cggcgcaatg gtatcgaatc
    30361 taacagagcg cgatacggac gcgctaaagg cgctctgtag cgatattggg tggggctatg
    30421 ctgttttgga tgctgccggc gaacaggtcg atggtgatcg tccgacgcct gaagggctgg
    30481 ggccttatcg tttgcatgtg aggaagccgc cgagcgagca gggagtgctc cgtcttctta
    30541 ctctttcggg acttcgcgat gccttgcgcg atgatgatca aagtcccgtg tggtccgttg
    30601 ccggcttcac tggtcgaatc gcaaccggtt tgcgcatgat tcaaggctgg gatgaagcgg
    30661 aacttccaaa gcaggagcca ccaacgaaat cgccgcgccg tttggtgcgc gagtataccc
    30721 aggctcgtag ggtgccagtt gatcttcgtt tttggctctc tgaggagctt gacgggtaca
    30781 catttgatca gcctgcggca cggctgtggg ttcaagcggc aatggctgca ctgactgctt
    30841 gtcttcccaa cgagattgat cctgatgagg gcacgctgaa gttccgtggc cctccccgtc
    30901 tggagcttta cccgtttcgc gctgctgaag aaggcataga gcgagacctc ttcaatggct
    30961 tgctgcgagc cttgaagtgg acctttgaga atgggcgtga ggcggagctt aagcacacgc
    31021 tgctcgccgg cgaactcgct cgctccggct cgtccaacga agacgttgtc gaattccttc
    31081 gtacccactt ggagcactcc ctggagagtg ccgagattgc gtaccagatg acgctctcgg
    31141 agaccggtcg cgacaccatc aagatcctcg gtgagctgcg gaagacagtc tcggatgaga
    31201 cggcaaagct tgccgacatg agccgtcagt tgaccggcgc ggtctccgcg gcagtcgcta
    31261 ccggcatcgg gttgattgct gcacgcgtgg cggcaaatgc cccgacactt ttgattatcg
    31321 ctgtcgtcgg tgttgtgctt gtgtacatag cgatgatcat cgcctcggga atacgctaca
    31381 tgcggctcca gcgctctctg cgtggcgaat ggcaacatcg actgtatcgc ttcctacctg
    31441 ctagagagta cgccacgctg gtgacttcgc caacaaagaa ggcagaggac tccttccgaa
    31501 ccacggctta cttgggggca attgctgttc tgattctgag cgtggcgtgc gcttggtttg
    31561 ccttctcgcc gcagagcgac gtggacagta agcccgaaca agggttgccc ttgcccgagg
    31621 tttcgagcca agccaatggt cgccaggcgg cggcctccaa ggaagtcccc tcaaaggtgc
    31681 cggtagtcct gcacaatggc ggtgagaggg agcccgaggt gatcagatct gagacgggcg
    31741 atcaagcgcc gcccaagtag ccgcgtctaa gacatagtgt ttggccgtcg agaatgatgc
    31801 acgcacatcc aaaaggatga tcgcttgcgt ggacattggc cagtggtgat ggctaggccg
    31861 cgggcgtatt ctcagggcag gtcaactggg ggtattaggc catgccggac tcaccgagtg
    31921 aaaagcctaa cgatctgaag ggcggcgcaa ttcggacgtt cacacgaatt gctgaggctt
    31981 ggtctctggg cgagagtgag cagcgtcaga tccttgcgct gtcagagctt ccgcagagtg
    32041 gggacgaacg cttggttgat gaccttgtgc ttatgcgcat tggtcagatc atttcgattt
    32101 atcgtgcgct ccacaccata tttcgcgatc caaaacaggc taactcttgg attcaccgcg
    32161 acaatgcggc agccattttc tgttgcgaac ccgccatcaa actgatgtgt agcgggcagg
    32221 ccggagccct tgaggctgtg cgcgactatc tagaagctca acgcgattag attgattcgt
    32281 ctactgcctg cgtgaaaagg aatgcccaat gggaaccttt ttttcaaaag tttgtcgttc
    32341 tggtataccc gcgaaggcgg cttcagctcg gagcgcgtca gacattcccg gaatttctag
    32401 aaagtttgtc ctaaacgaca atctttacgc cactgcataa tcagcgtcgc gtcgctaccg
    32461 ttcgtcggcc catgacttcc ggggggttga ctacagttgt cgtcaagctg acagtgacga
    32521 cacgtgtagt caagggagtg gtgtcatgcg tggcaagacg atcggggacc aggaactggc
    32581 cctgctgcag tacatcgatg aacatgcgcc ggccagcgtc ggcgaggtcg ccagcggcta
    32641 cggcgaggcc cgtggcctgg cccgttccac cgtgctgacg atgatggagc ggctgcgcgc
    32701 gaaggggtat cttcagcgcc ggcagcagga cggcatctac cgctaccagg ccacccgtgg
    32761 cccggaaagc gtgctgcagg gtgccgtggc ccagttcgtc gacaacaccc tgcaggggtc
    32821 ggtgtcgccg ttcgtggcct acctgtcgca gcgccagcag gtcagcgaca acgaactggc
    32881 cgagctggaa gcgctggttg cccaactcca atcgcgtcgc cacgagggct gagccatgga
    32941 caccacgatg ctgatcccgt tgttggaacg gctgggctgg accagcctgc agaccgtgct
    33001 gctggtggcc ctggtgtacg gcgtgtgccg cgcgctgccg tcgctgtcgg cggcgacccg
    33061 ctgccgcctg tggtggctgg tgtcgctgca ggccgtgctc ggcctgttct ggagccagcc
    33121 gctgcagctg gcctggttgc cggcaccgca ggcagtggcg atgaccgcca ccgatgtggc
    33181 tgccgacatg atctacccgc tggccccgga agcctctgca cagctgctgg ccgcgatgcc
    33241 gatgcctgcc gcggacgtgc cggcggtggc gtggtgggcc gttgcgctgg ccgcgctgtg
    33301 ggtgtccggc gtgctgctga tggcatggcg caccttcggt gagtggcgcc agtgccgcgc
    33361 gctgctcgcg gcggcctatc cctgccagga cgaggcgctg gtacaggccc tgcagttggc
    33421 ctccgaagcg cacggcgtgc gccctgcacc acggctgtgg atgagcacgc aggtggactc
    33481 gccgcagctg gtcgggccgt tccgtccggt actgctgctg ccggccggcg acaacgccct
    33541 gcagggcgat gcgctggacc tggcgctgac ccacgagctg cagcatctgc agcggcgtga
    33601 cctgcagtgg ggcctgctgc cggcgctggc ccagcatctg ttcttcttcc acccgctgct
    33661 gcgcctgtcg gtgcgcgaat acgcccaggc ccgcgaggaa gcggtggatg cggcagtggt
    33721 cggccagcac ggcgccagcc gccaggccta tggtcgcctg ctgctgcagt tgggcgtggc
    33781 accgcagccg cacctgggcg tggccagtgc cgcgccgagc accaccagtc tcaagcgccg
    33841 cctgatgtcg ctgcagccgc gccgggcctg tccgcgcatc ctggcgatgg cgttgaccgc
    33901 tgtggtgctg gtggtgggtg tggcgccgat gcgcctggtt gccgcgccgg tgccgccggc
    33961 accgcccgcg ccgcctgcgg caccgaaggc cgtggtgccg ccgccgccga aggctccgaa
    34021 agcaccgccc gcaccgcctt cgtccgcgcg cgttccggcc gtgccggtgg cgcccgcgcc
    34081 gcctgccgag ccggctgggg ttgaggcctt gtcaggtccg gatgatgcag atgtggcggt
    34141 cgacgtggat gcggatgtcg atgtcgatac cggcatgcac agtcaacata cgacctcccg
    34201 cacgacctcc atcaccacct acggccgcct ggacctgggc aaatcgccgc cgcaggcctt
    34261 cgtgctggtc gatggcgatt cgaccttcgc caacggcggc atggacgacg tgacggtcgc
    34321 ccgcaggcag ctcggcaaag gcccggcgct gtggttccgc cagggcgaca agcgctacgt
    34381 ggtgcgtgat ccgatgatga tccagaccct gcagcgtgcc tacagcggcg cggcggatct
    34441 gggccgccag cagagcgaac tgggccgcca gcagagtgcg ctgggtcgcc agcagagcga
    34501 actcggcaag cagatgggcg agatgggccg cctgcagggt gaggaggcac gccgcatggc
    34561 gctggccgcc gccgaggctg cgcgcagcgc gatggcagcg catgacatca accgcgaagc
    34621 ggcggcagaa gcggcgaagg cggcgcgggg cgcgaccaac gatgcggccg ttgcacgtga
    34681 ggctgcacgt gaggccgccg cagaggcacg tcgtgcgatg caggaagtgg acaacgaaac
    34741 cgcgcgggcc agccacaccc gcggcatgca gcgcctggcc agccagcagt ctgaactggc
    34801 cagccgccag gcggcgctgg gcagccagca ggccgcgttg ggtgaacgcc aggcacgcgt
    34861 gcatgagcag gcgtcgcggc aggcgcagca ggtgatcgcg cgtgcactgg cgagcggcaa
    34921 ggccgagc
//
LOCUS       DAOKIP010000021        34793 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.021,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000021 DAOKIP010000000
VERSION     DAOKIP010000021.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 34793)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 34793)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..34793
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.021"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            <1..1383
                     /locus_tag="QEL58_000928"
     CDS             <1..1383
                     /locus_tag="QEL58_000928"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675430.1"
                     /translation="QPGDRALWQVPLYLGDGAPDRGLLALQLNVSNDLRLQARLPPKP
                     GSGSEVDADIHITGRDIPFQAPALLLERSSGTVRGEWTFTSLNWIPSLFVRKPWLQLD
                     GGGTLNADLRLRHGELIEGSTVDIPSAAAVAEVAGVRLAGTASAHGELKAGTPNQAQL
                     AIRLPRFSARPSDAKDVRLFDGRDLAVDLTGDGRLQELRKGVRARLRFSEATIPDLAA
                     YNRYLGSSQLRLLRGTGSLSGDATLDTDGRVGHGTARLLGRNASAKVAGLDMGGDVDV
                     NATLRRGDFNQRHFDLSGTTVELRNVQVAGTESSAAWKGRAAFKRGRIDAQSPFQVDA
                     TTDLTLSDARPLLAVFASRTDYPRWTLSLLDSGQVDAQARLRWRPGHLIIDGLQAEND
                     RLSVRARLDLLEQRKRGDLYLRWGLLGAGVELDGDQRQWHLAKAREWFDQRPSLLPSS
                     QDGSAAGTSD"
     gene            1456..1941
                     /locus_tag="QEL58_000929"
     CDS             1456..1941
                     /locus_tag="QEL58_000929"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005416521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan-rich sensory protein"
                     /protein_id="HDS1675431.1"
                     /translation="MKRSSQALGLLGWVAVTFAAAALGAWASTSAASFYASLTLPAWA
                     PPAGVFGPVWTLLYAMMAVAAWLVWRERSWRGARPALTLYLVQLAVNALWSWLFFGWK
                     LGALAFADILVLIVLVCATILGFLRIQRAAAVLLLPYLAWISFASALNFAVWRANPGV
                     L"
     gene            complement(1959..2252)
                     /locus_tag="QEL58_000930"
     CDS             complement(1959..2252)
                     /locus_tag="QEL58_000930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014647137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675432.1"
                     /translation="MNLQTLPSMPYRMLPDSCQFELLDVDALQDPASGRLLHLYSLVA
                     RCLSCETVFKAEEGQGLVSHSASRVVRCPAGCGQQAFKPSLLRAWQPQVAAQA"
     gene            2520..4757
                     /locus_tag="QEL58_000931"
     CDS             2520..4757
                     /locus_tag="QEL58_000931"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HDS1675433.1"
                     /translation="MPSVESKHDVALSRCAREPIHTPGAIQPYGVLLVLEPQSLRVRE
                     RAISQPRLLQQFGEPLMQHVSEVLGGVLAPFEALFQQAAVGSSAHVGAVHLDGHGRHQ
                     LLVHRSATDLLVELESPVPGQPGSLEELYPAIRELMTAIESATTVEDLCQLAAEHMRR
                     LTGFDRTLVYQFDPGWNGIVVAEDGNGLLPSYLDLRFPESDIPAQARELYRRNRVRLI
                     ADNNYTPAPLMRAEDHRDAPPTDLSLAVLRSVSPVHMQYMRNMGTGASMSVSLVHEGQ
                     LWGLVSCHTVHPRRLPYHVRTACEFMGQILSLQIALKERARAIEERVARRSVLVKLLA
                     RMAGDEDFMAALRHDETSLLSLTGAAGAAIVHKGDCMRVGVCPPATDVLALADWLAAQ
                     QAGQETYCTDHLAGDWSPGMRLAGVASGVLAVSISQLHDSYLMWFRPEVVRTVRWGGD
                     PRKTAAPDVALSPRSSFEAWKETVQQRSLPWNDADRDAAHEMRTAIVDIVLRKAEEMA
                     ELNEQLMRSNKELEAFSYSVSHDLRAPFRHIVGYSELLGSSAGERLNDTERRFLDTIV
                     ESAKSAGTLVDDLLSFSQMGRSTLGRVRLDMAALAEDVRRSLALDYAGRDVQWTLAPL
                     PEVHADPTMMRLVWQNLLSNAVKFTREREHAVIEVGHERSEEEDHFFVRDNGCGFDMR
                     YVDKLFGVFQRLHHVEEFEGTGIGLANVRRIVSRHGGRTWAEGEPGKGATIHFTLPRS
                     TGDHP"
     gene            4754..5221
                     /locus_tag="QEL58_000932"
     CDS             4754..5221
                     /locus_tag="QEL58_000932"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HDS1675434.1"
                     /translation="MRDLRPILLVEDSPKDAELTLAALSRCQLLNDVIHVRDGAEALD
                     YLRCEGKFAGANHGGPVVVLLDLKLPKVNGLEVLEQVRGDAQLSSTPVVMLTSSREEQ
                     DLVRSYELGVNAFVVKPVDFKEFFDAIQGLGMFWGITNQPPPHRPNGSGQHNA"
     gene            5214..7613
                     /locus_tag="QEL58_000933"
     CDS             5214..7613
                     /locus_tag="QEL58_000933"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HDS1675435.1"
                     /translation="MHDGSRRSERLRILMLEDSALDAELITAQLQRAGLDFEVERVWS
                     RNTFIEAIDHHPFDVILADHVLPGFDGDAALALARERIPHTPFIFVSGTLTEELAVQA
                     LTRGARDYVVKQRLQRLPDAIRRAQQEARERTQLADAQAALNDSQAQLQQVTDAVPAL
                     IAQFDKEHRYRFANKAFLDWHGISLAELLGRSARDVSGISAFEHALPSLQQVLRGERS
                     SFQVELAHRSGESRFVQMDCVPERGADGEVVGYICLGSDVSGLKQAELALREDNQLLE
                     RQVQARTTELRASKRRLQAIFESSFQHQVLLDLSGQVVDANIASLAAVLADKPEVMGL
                     RFGQSPWFAGTDDVGATVDRAIADAAKGHSSLHALDLELPTGRRSFDFSFRPLLDAEG
                     AVTAVVSEAVETTARLQAEHALRQAQKIEAVGQLTGGIAHDFNNILTVISGNVEHAML
                     LSERAGEPGAMVGRALDNALKGVGRAASLTQRLLAFARRQPLHSQAANLNDRLLDMHD
                     MLQRALGELVQLDIRVAEDIWCIEIDVSQLEASVLNLAVNARDAMPHGGRLVIEVDNS
                     HLDHDYAALFPDAAPGEYVMLRVRDNGHGMDAATLARVFEPFFTTKQVGRGTGLGLSM
                     VHGFVKQSGGHVLIDSVEGGGTSITMMFPRSALALPCEGTAPQAGLAGYSPREETILV
                     AEDNDEVRAHTVDALRMLGYRVLEAHDGPSALRLLERPDTTVDLLFSDVVMPGMSGWE
                     LVREVRERWPDVAVLFTSGYPRDHDAVGSQGRAAALLPKPFTRSDLAQAVRTALEAAL
                     H"
     gene            complement(7616..8278)
                     /locus_tag="QEL58_000934"
     CDS             complement(7616..8278)
                     /locus_tag="QEL58_000934"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005416515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase"
                     /protein_id="HDS1675436.1"
                     /translation="MTGATGLVGQGVALACQRSRQVSQLTALVRHPGSLRGAGSELIV
                     PEFLHIEARQDELARFDACFYCAGAPPVGTAEAEYRRVTLDTTLAVARAWAAANPQGC
                     FLYVSGAGADAGSRLMPLRIKGETEQALQALPVRTVMLRPGGVRPVEGTGTRHGLLKP
                     LYWGGAPLMKLAGAIAPSLVTSNLALGQAMIALAGREHPPATVECADINRIAAGVRDP
                     AP"
     gene            complement(8319..8999)
                     /locus_tag="QEL58_000935"
     CDS             complement(8319..8999)
                     /locus_tag="QEL58_000935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005416514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HDS1675437.1"
                     /translation="MNPHHHLHESTLMSYAAGALPAPLSIVAGAHLEQCSQCRQRLRD
                     AEAIGSVLLEQTQPASAEGDARRSALRQAMLAQLASESPISLPMAASVPRRERPEADP
                     DHLPASLHPYFGASLAALRWRWMAPGVHCIRAEQMPSLIMLKIAPGKCLPMHSHGRSE
                     LTQILRGSYNDALGLFAPGDVADLDEEVEHQPVTAPGVPCICVSALDAPLVFSGWLAR
                     KIQRFVKL"
     gene            complement(8996..9619)
                     /locus_tag="QEL58_000936"
     CDS             complement(8996..9619)
                     /locus_tag="QEL58_000936"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008268264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HDS1675438.1"
                     /translation="MYPDAASTLLTFDTARIVSSSQQPSSEPTNWAGDMDRVARLRDR
                     DCFMRIYDHFMPRLCVYLRGLGAPDAVAEELAQECLLRLWLRAADYDAAQGALSTWLY
                     RIARNLHIDRVRRERSWLQVQAAVEDAATVDMVERSSAEQFADQARLRQRINELPAVQ
                     ARLVRMSYFEAKSHSEIAEALGMPLGTVKSHLRRAFLQLQSKVGGAP"
     gene            9751..10518
                     /locus_tag="QEL58_000937"
     CDS             9751..10518
                     /locus_tag="QEL58_000937"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008267167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675439.1"
                     /translation="MRTAWLLLCLPHAALAAPWLRTEGLASTGQGATAYREVHWQRDA
                     TEGAERWVLYQCPDGRPFARKHLPATSRPQARGYSLDDLRSGQKVRIEVAGGSVLIDW
                     KEDADAPSRQRRLELPADAVIDAGFDAAVRQHWPALMRGERISLPFLVPGRQRYFPVQ
                     VRRTAPLRWQGVAAQQIEASLDTWYGSIAPRLQLVYADTDRRLLEFQGTSNLRDARGH
                     YPQVVVRFAAAARASSASEWQQAWAQPLVAGCGVTPG"
     gene            10600..11550
                     /locus_tag="QEL58_000938"
     CDS             10600..11550
                     /locus_tag="QEL58_000938"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA desaturase"
                     /protein_id="HDS1675440.1"
                     /translation="MASAAPLPRRRWRLLRTVQRWVDTGSAADSAVDRPGRIDWLRAV
                     PFALMHVACLAVIWVGVSWTAVIVAAALYAVRMFAITAFYHRYFSHRTFQASRAVQFV
                     FAVIGAASVQRGPLWWAAHHRHHHRHADQPLDPHSPREGGFWRSHMGWFLTREAFATD
                     LSRIPDLARFPELRWLDRFDTAVPVLLAAALYALGAALERWAPDLRTSGPQLLVWGFF
                     ISTIVLFHATVTINSLAHRFGRRRFETRDDSRNNLWLALLTFGEGWHNNHHFFPGTVR
                     QGFRWWEVDLTWYGLRVMAALGLVKGLKPIPEWVLAKARY"
     gene            11552..12829
                     /locus_tag="QEL58_000939"
     CDS             11552..12829
                     /locus_tag="QEL58_000939"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HDS1675441.1"
                     /translation="MRIAIIGSGIAGLASAWWLDGEHEVTLFEANDYLGGHTHTHDVQ
                     VDGLQMAVDTGFIVFNPLHYPLLTALFDELGVASQPTTMSFSLHSERSGVEYNATSLD
                     GLFCQRRNLLSPRFWGMLADLRRFYRDAPLLLAEDEGPTLGQYLHDQHYGEAFIEEHL
                     LPMASALWSSPTRSVMEFPARYLAQFMANHQMLQMTGRSPWRVVSGGSARYVDALRAR
                     WRVRERLQCPVHSVERMPWGARVHSAAGVEGFDEVILACHSDQALALLGDADPVEREV
                     LAAIRYQPNEAVLHTDATLLPRNRKAWAAWNAHVPRDPAAPCTVSYCMNLLQGLPGDT
                     PLVVTLNRSEAIDPTKVLRTLCYAHPVHDHAAVRAQQRWPELQGRRHTWFAGAYWGWG
                     FHEDGIRSARRVVDALRACEPHRLLPAAGEVAA"
     gene            12826..13593
                     /locus_tag="QEL58_000940"
     CDS             12826..13593
                     /locus_tag="QEL58_000940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012480157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1365 domain-containing protein"
                     /protein_id="HDS1675442.1"
                     /translation="MSASALYFGQVMHRRHHPHPHAFRYPIAQLLLDLDELDTVFAGR
                     WLWSINRRNLAEFRRSDYFGDSTRPLADAVRDHAAATLGFRPAGPVRLLTHLRFAGHV
                     FNPVSFYYCYQPDGSTLDCIVAEITNTPWKERHAYVLPVSTATHEGTSLRWQFDKRFH
                     VSPFMPMDCCYDWRFNLPGDDLRVHMQVWRDGVRQFDATQAMQRRALDGPGLARVLAR
                     YPLMTLQVVAAIHWQALRLWLKRNPVHDHPNLAGKPR"
     gene            13590..14849
                     /locus_tag="QEL58_000941"
     CDS             13590..14849
                     /locus_tag="QEL58_000941"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005413306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HDS1675443.1"
                     /translation="MNSMTPSVALPRPGALDAFLRRRLLAQLAPLREGRLCVRDALGE
                     VWLGDARGELHATVTIEDPAFYRKVAAQGSVGAGESYINGEWRCDDLVTLIRLLVRNR
                     DLLDSMEHGPARVGGWLLRGWNRLRRNSREGSRRNIAAHYDLGNDFFALFLSPDLMYS
                     SALFSDESESLESASRRKLDRICQQLRLSPGDRVVEIGTGWGGFAVHAATHYGCHVTT
                     TTISAEQHALAAERVQAAGLQDRVTLLMQDYRDLQGQFDRLVSIEMIEAIGAEYLDTY
                     MATLQRLLKPDGVALLQAITIEDHRYEQARRSVDYIKRYVFPGSFIPSINAIMAAKTR
                     SSDLQLIAQQDFGHSYALTLRAWRQRFLAQLPAVQAQGFDARFCRLWEFYLAYCEGGF
                     LERSIGVSHLLLARPGHRPITDAGGGH"
     gene            14851..15399
                     /locus_tag="QEL58_000942"
     CDS             14851..15399
                     /locus_tag="QEL58_000942"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005413305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2878 domain-containing protein"
                     /protein_id="HDS1675444.1"
                     /translation="MGRFWANLLGNQLVWLSAVAGAGRGWQWPALLAALLYIGSQLLT
                     SPQPRLDLRLLAWALACAWLVDASAAASGTVRYAAAAFGWAPPPWIMALWAAFAMTLT
                     TSMRFLQRHAALPMLFGLLLAPLAYLSAARGFDAVRFAAPAWHGLLVLGVGWSIALSL
                     LCSRARRGSRGTPQPPLAGAPS"
     gene            15396..16181
                     /locus_tag="QEL58_000943"
     CDS             15396..16181
                     /locus_tag="QEL58_000943"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010485798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1295 domain-containing protein"
                     /protein_id="HDS1675445.1"
                     /translation="MIDLLWVLLYAVLIMSWGWAWQRRHTNIGVVDVLWAKGVGASAL
                     LLALLGDGALVPRMALGVLGGVWGSRLALHLWHRVRHEAEDGRYRYLREHWHGHQGKI
                     FGFFMAQALLISLFALPFVAVAANPRPGLTIWIVVAAGVWLLSVGGEARADRQLARFR
                     ANPANKGRTCRDGLWRYSRHPNYFFEWLHWFTYVLLAVGSPLWWMAWVGPLLMYVFLR
                     YLSGIPFTEKQALRSRGDDYREYQRTTPMFFPWFPRPSKEHSA"
     gene            16178..17251
                     /locus_tag="QEL58_000944"
     CDS             16178..17251
                     /locus_tag="QEL58_000944"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005924864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HDS1675446.1"
                     /translation="MNAIPSQNPTEAGESGLIAWAERGWVPDAALRAGIRRLCAQRLH
                     EEAEGGIEGQSARFNRRIAELADSPLALHADAANRQHYEVPAAFFQACLGRQLKYSSC
                     YYPTGNETLDQAEDAMLVLYGERAGLADGQHILELGCGWGSLTLWMAERYPLARITAV
                     SNSNSQRQHILAQCASRGLHNVEVLTRDVNQLELPHAQFDRCVSVEMFEHVRNYKRLL
                     ARIAQWLKPDGALFVHIFAHRTLMYPFETDGGDNWMGRHFFTGGLMPAADTLLHFQRD
                     LQLEQRWLIDGTHYQRTADHWLANQDAARDRVMPVLVATYGEAAARIWWQRWRMFWMA
                     CAELFGYDDGQQWLVAHYLFRPR"
     gene            17260..17793
                     /locus_tag="QEL58_000945"
     CDS             17260..17793
                     /locus_tag="QEL58_000945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipocalin family protein"
                     /protein_id="HDS1675447.1"
                     /translation="MRMFSLLPLLAVGLFGTGCSSNDTLPLPRPPSVDVPRFMGDWYV
                     IAHIPSRPEREAFDAVESYALRPDGRIQTTFTYRKGSFDAPQKSMHPIGRVEKEGNGA
                     VWGMQFIWPIQAEYIIAWLADDYGQTIVARSKRDYVWYMARTPQVSDSDYQQAVQRIA
                     AMGYDTRKLRRVPQSVR"
     gene            17918..18418
                     /locus_tag="QEL58_000946"
     CDS             17918..18418
                     /locus_tag="QEL58_000946"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005416572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HDS1675448.1"
                     /translation="MHPESRPHTCSLLLVEDQFDLATLMEQALQQEGDQVTHAYSVFD
                     ALELLDTRQFDGAVLDVELRDGVVFPVADRLAALGVPYLFVSAVYDQLVPARHRGAPF
                     VAKPFHLEKLQRAVQQAISGSPAIASPGPEGAPRNPAHPQEAAAPGTQSSANPATLPS
                     SSGRIM"
     gene            complement(18364..19836)
                     /locus_tag="QEL58_000947"
     CDS             complement(18364..19836)
                     /locus_tag="QEL58_000947"
                     /inference="COORDINATES: protein motif:HMM:NF012371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-lactamase family protein"
                     /protein_id="HDS1675449.1"
                     /translation="MRTARFWMALAGLLLVTIGSARPAVATEGPRSDAASRASAPLDA
                     AAIQGIDRGVGQVMRRFNVPGAAVMVLQDGRLIHAKAYGQRDLARGLAVRTDTPFEIG
                     SITKQFTAAAVVQLQEAGKLSLDDPLARYLPDAPHAHEVTLRQLLSHTSGLHDYFDGP
                     EQEVDALVTQPIAFDRLIARIRDRPLDFAPGSRWSYSNTGYILLGRVIEVVSGERYVD
                     YVRRHLLEPLDMRHTFTLADTERLQGMAVGYRHEAGVLRRSPYFHPDWSGAAGFLVST
                     LDDLARWDRGLSGGRVVSQAGYREMITPVHTAEGGSADYGLGLFVNAVYGQARIGHTG
                     GSQGFTTADEYFPELGLRIIAFTNLGDKTPEAGITLTNAVFSALHPAIVAAWSQPAPG
                     EDAAVTARARATFEQLQAGRGYADFSANLRTRLEAGLGAGLAKAVGPYGKPDALVFKG
                     TQAGEKGTMYRYVATFGPGVFMPYMIRPDEEGRVAGFALD"
     gene            19877..20473
                     /locus_tag="QEL58_000948"
     CDS             19877..20473
                     /locus_tag="QEL58_000948"
                     /inference="COORDINATES: protein motif:HMM:NF024248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDS1675450.1"
                     /translation="MKSATASHSSPAPLKLTPAQLAAMASPARMAILQRLDAEGPASI
                     RELAERLGRPATALYHHLAHLQKHGLVRITEHRDTGRRPEAVYAAASSQLSSRDAVRT
                     PSGRRSLVRVATRVVAATLRAFASAATQAAARFEGPQRNCAVRHLSFRADDEQLARIN
                     ALIEALEATALDAGTQGDPLLLTVLMAPAAHRPRGPST"
     gene            20635..21261
                     /locus_tag="QEL58_000949"
     CDS             20635..21261
                     /locus_tag="QEL58_000949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005413301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDS1675451.1"
                     /translation="MNGYPAPRLLRLALLDDHEVVRRGTALHLSQDARFSIVASHGHS
                     DAFIQDLHATPVDVAIIDLTLARGDRDCMALVELLRATFPAIPLLAFATLSPSIHIGP
                     LIDAGVSGVVSKAEPLPLLSEAIVRVSLGLDRLPPDCRHPADGEDLSRNEREVLHLLL
                     AGLTVSEIAQLRHRSIKTVSTQKKSALRKLGLRNDAEIYAMRHQLEAL"
     gene            21258..23579
                     /locus_tag="QEL58_000950"
     CDS             21258..23579
                     /locus_tag="QEL58_000950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HDS1675452.1"
                     /translation="MNRRHRPHFAPVLLLALLLLPTVSAGDAPSQRWAAGREVRVATA
                     PSLRPLPPALADTAPLPTLAHGYATLVARHSQLRFTEHPYPSTGSSVVAVCRGDADLV
                     LVIGAVRPLHQPCANLVASTPFRGGRTVLAGRNGGRLPHDVAQLEGRTLAVVNGGPYA
                     EWLQAHHPHLRLLHLPDRHATLVAVETGAADVAIGLESTLQPMIRRHFGGTLQLQPFE
                     SAFSTDLYLLVRSIDRQLLARIDQALQDITLEEHAGLLQLWARQALPASIQRMFDQMR
                     MPPPHWLLALIAVLAGLPILWHVAARRTRRERRRHARAAGMVSHEMRNSAQAMLMSID
                     LLGRSPLASGQRELLAAATAAGRSLRSLLNRSLDFSRLAGGGFKPHVGACDVASLCQQ
                     SLDAIRPKARLKGLQLRFDCSPDPAPTIALDAEALRQIVDNLLGNAVKFTDVGGIDLR
                     VQLMPPVQPRALVLDVIDSGIGIDARHVGRLFRAFQQGEDGQMRGGSGLGLSIARELA
                     RAMRGDLTVQSVVGRGSRFTLCLPVQGAGDDVAPAEDPAAGRPLAGLDLLLVEDHALN
                     RQIIAEQLRRFGASVRAVADAAGALNEQSRSPRRIVLLDIGLQGMDGYALAQQLRSQA
                     SGPLRLVALSARTGRRHLARSRKAGFDAVLTKPLQVAHLLQALQLTPITGIAARTPLA
                     ALDHVHLADIRGELEGIERALADHDARAMRHHAHRLQGTLQICGAAAQADIAADLWEL
                     GHDAATDWIDARRLLQLLWHWHGSRTAEAMPAN"
     gene            complement(23580..24335)
                     /locus_tag="QEL58_000951"
     CDS             complement(23580..24335)
                     /locus_tag="QEL58_000951"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SapC family protein"
                     /protein_id="HDS1675453.1"
                     /translation="MTTTSDTTTEAAPSGAPLFYTRPVPLQADVHADLRVLPGKLEFA
                     AGNNAIPLVLGEFSLALHHFPILFAGPTAVPMAAVGVSEENLFIKDGLWEDEAYIPAY
                     LRRHPFIFIDTGADNDFLLGIDEESPRVVKGGDEGQPLFVDGKATDMVQQALEFCGQF
                     TREHEQTQAFSKALIDNGLLVERNATVRTPDGREFNLNGFQVVDVEKFVALPEATVVE
                     WHRSGWLALIHQHLMSLGRFNDLTRRQVERLAA"
     gene            complement(24446..24718)
                     /locus_tag="QEL58_000952"
     CDS             complement(24446..24718)
                     /locus_tag="QEL58_000952"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675454.1"
                     /translation="MRDDKDPGTLELTLPRKRGRPPKFGYAMSDAQRAARYRARRAGQ
                     ANHADVRSCSDMVLLDKIRAAVSARDTELAGFLVHVLWQRYPLQLK"
     gene            complement(24920..26956)
                     /gene="fusA"
                     /locus_tag="QEL58_000953"
     CDS             complement(24920..26956)
                     /gene="fusA"
                     /locus_tag="QEL58_000953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HDS1675455.1"
                     /translation="MNTQTLSRRRNLGIIAHIDAGKTTLTERLLWKSGEIHRVGEVHD
                     GNATTDFSAIERERGITIGAAAVQAQWSPRDLPSHRLTLIDTPGHIDFAIEVERSLRV
                     LDGAVAVFSAVDGVQPQSETVWRQARRHRVPLIAFVNKMDRVGASFERVLEQLQDKLR
                     ARPWALGVPLGSESDFNGWVDLVDERVLQWHEGAAATITPWDDAARRQWQAQRDALVE
                     AVADHDEALADAWLEGRVIDAEQLRAAIRRATLAGAGVPVLAGAAFKDKGIETLLDAV
                     VDYLPSPLDRPAVVAESEGGEVVLPPDPDGPLAGLLFKITHQQHGALSFVRLYSGTLK
                     VGDAVASSQHPQGRRVSRLVRVQADQTHDIEQAVAGDIVAVLGWKDAVSGETLSGRAQ
                     PLRLENIQAQAPVLAWRLEPARAADLIRMAQGLASLAQEDPSFRVETDRDTAETLVWG
                     MGELHLEVMVERLRSEWKVEVGVGAPRVAYQETPMRAVAGVVGRLVKQTGGQGQFAQV
                     VLDVTPREDGEVVFNDRIVGGVVPRSFIAAVEKGVRAALSEGPQGHPVVGIEVSLVDG
                     QTHAKDSSEMAFHRAGAEAIKAALAEGGTQLLEPVMAVTVHSPSASVGDVVGDLNRRH
                     GRIARIEDQDGRAEVSGFAPLAQLVGYTTSLRSLSQGRASSEAHLHGYEPVRAA"
     gene            complement(27358..28107)
                     /locus_tag="QEL58_000954"
     CDS             complement(27358..28107)
                     /locus_tag="QEL58_000954"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005413298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675456.1"
                     /translation="MFRTAPRGVLLAALLASVCAANAAATSPVSLTDAAENASLIETR
                     HSEGKGGAVTSLKTQYFANEEMSVSWDDQQVLVLCKEAAYLKLSAGKADAGSLTTEQR
                     QMIVYQALMSGLGAVAGVIGPAGEVVAVADDGSETRGVGENTWAYGVERHEVMTQRMP
                     DGALRVRVRKTETVNNAKPASPDAMFSTEDDQAARLSELVPVGSWTEVLIHGGPRQAQ
                     VDPAMSLKGWVSMGDDRAATVAEARTLHGCK"
     gene            complement(28172..28933)
                     /locus_tag="QEL58_000955"
     CDS             complement(28172..28933)
                     /locus_tag="QEL58_000955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010485817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme ABC transporter ATP-binding protein"
                     /protein_id="HDS1675457.1"
                     /translation="MSVLLKLHEVVVRRQQREILHGISLAFEPGTVTALVGPNGAGKS
                     TLLAVAAGDLRADAGEVSLRGKPLAGYKAGPLARERAVMPQEHGVRFAFSVEEVVAMG
                     RLPHPPDPVADDAHVEGAIDAAELQALRLREVQQLSGGESARTTFARVLAQDTPLLLL
                     DEPTAALDLRHQERTLRSVRACAEAGACVIVVLHDLNLAAGYADRIVLLEQGRVAADG
                     TPLQVLTEDNLQRVYQQDVVVLQHPRRGVPLVVVT"
     gene            complement(28930..29973)
                     /locus_tag="QEL58_000956"
     CDS             complement(28930..29973)
                     /locus_tag="QEL58_000956"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HDS1675458.1"
                     /translation="MSPADRRRHRGRMMLMVALLALLGAVLASFAVGPLRLPPLEVVQ
                     ALGVKLGLLDSQAVSSRDLAVVWQLRIPRALLGAMVGASLAMAGASLQGLFGNPLADP
                     GIVGVSQGAALGAVAAIVLGAAGAAGWLVPVAAFVGGALAIGLTYALARPGKGSGNAT
                     LLLVGIAMAAFCSALIGFLTYIASESELQSLVFWQMGSLARANWADVAAVVPLFAIGV
                     FALQRLATPLDMLALGERQAQHLGLDVTRTRRRLVAFSALLVGAAVAFAGSISFVGLV
                     VPHVARLLVGPGHRWLLPLSGLLGALLIVVADTAARTLDPPAEIPLGLFSAALGAPFF
                     LWLVLQQRRKAAP"
     gene            complement(29970..31016)
                     /locus_tag="QEL58_000957"
     CDS             complement(29970..31016)
                     /locus_tag="QEL58_000957"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005416496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDS1675459.1"
                     /translation="MNIASRLRLCALPLAVSLALSACGGAPAPSEGQKPAEAPAATAA
                     AEGALPAGWQRVAGAEMPAVHDQKAVLPAKVHSDDGADIEVADTSRIIAGGDDVIAVI
                     EALGLGKQVFAAPTNTTTQAGLAAPHQFLFNRTTGVEGVLSLQGSLFLGNSLRRHTEL
                     AKKLREVGEPAVVIDDLQPAPDKVRKVAAALGLAEAGQALATQVQRQLDEAAAIGKGL
                     GHAPRVIHVSATGAGGAPTVAGADSASAQLIALAGGVNIGTEAGVKNYSQLSNEGVVA
                     AAPEVILVTEHDLQLFGGAEGLWKSYPTLKQTPAGQANRVWVMPDVQLKYTSVGSGAG
                     ALELAKALAALPKA"
     gene            complement(31068..32444)
                     /locus_tag="QEL58_000958"
     CDS             complement(31068..32444)
                     /locus_tag="QEL58_000958"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019337455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YncE family protein"
                     /protein_id="HDS1675460.1"
                     /translation="MSFRPSFRLTSLAAGLLLAVTATAQPVFDQPANATFKGQVVSRG
                     ENVVPGSTADVVGRGFVPGQKVSLLRGDSVLNAQPLVVDADGNFKTQLSIPTDAVPGT
                     HPVVVRASQPAAATVLKLRVSPQLPLSGQAQFATQSNKLVPGLYQSAYSAASNAVFVT
                     SAVGRPPVTQSQLLKLDPKTLKVTKAITPAQVPGSTNGAVYAVYGVGVDDTNGNVWVT
                     NTRQNSIAVYRQKDLSLVHQFPVDAVPHARDVVVDGTHGKVFASATGEDHLSVFDAKT
                     FKELPAVTLESGVDDGKFTPMSLVLDEKGGKLFTVSIGTPEAAVIDVASGKVDKVIDL
                     GNSISASGVAFDAARNRLYVASQGTDNLLIVDVAAGKVLHDVPVGAGALNVAFDDASG
                     LAYVSNRGAGTVTVVNGDGKVVANLDGGTLPNHVRADGKGNVFAVNKSRGAEDPKGDR
                     ITRITPKQ"
     gene            complement(32567..33595)
                     /locus_tag="QEL58_000959"
     CDS             complement(32567..33595)
                     /locus_tag="QEL58_000959"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDS1675461.1"
                     /translation="MKHFVLPSRRGPLARGLAALMMGLLLATPYAHAQQRNPLQKIGH
                     TVLDEPAASYRFEHFVVDSPDQQRRWRVNVAIPAKAGKAPLPVLYALDGNAVAMVLDQ
                     PILAELAARKAPPVLVLIGYDNDLRIDSKARTRDYTAWIDRADDESGTTQAAGGGAAA
                     FLDVIERRIKPEVERRARIDAQQQALWGHSLGGLFVLNALYTRPAAFQSYLAASPSLW
                     WSQGAALGDPEQQFVQNVHGQHAKLWLMLGGAERVGDRGKRDMNNPRVVAHLRRIGGA
                     TPDAAMQLSERLGKVPGLSVHYREFDGLGHGPMLPASFHAALHELYGVTDRSAGDGAA
                     PGGDNAAE"
     gene            33877..34251
                     /locus_tag="QEL58_000960"
     CDS             33877..34251
                     /locus_tag="QEL58_000960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014647092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675462.1"
                     /translation="MKQTALIALTLGLLAPLAAHAAQDLPTLYQAFEEAGNSTLSMEE
                     LNQTVTFTAVALGVSSNMAGEPLIEAGDDQGNVLARLTTSDDQQAAKLGALEEGAVFS
                     ASCTLQFSSGTDYLSFGDCTIK"
     gene            complement(34325..34714)
                     /locus_tag="QEL58_000961"
     CDS             complement(34325..34714)
                     /locus_tag="QEL58_000961"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008268541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF805 domain-containing protein"
                     /protein_id="HDS1675463.1"
                     /translation="MQEMILPLKRYAQFEGRANRREYWMYQLFLFLLATAVMLLAGVL
                     AILLRNSADALAGVLIGMVVLLGVMWLATIVPLIAVTVRRLHDCNQSGWLFLLALVPG
                     GGIVIMIFSLLPGTPQENPYGSVPTGP"
BASE COUNT         5642 a        12212 c        11244 g         5695 t
ORIGIN      
        1 caacccggcg accgtgcgct ctggcaggtt ccgctctatc tgggcgatgg cgcgcccgat
       61 cgtggcctgc tcgccctgca gctcaacgtg tccaacgacc tgagactcca ggcgcgcctg
      121 ccgcctaagc cgggctcggg cagcgaagtc gatgcggaca tccacatcac cggacgcgac
      181 atcccgttcc aggcgccggc cctgctgctg gagcgcagtt ccggcaccgt gcgcggcgaa
      241 tggaccttta cttcgctcaa ctggatccct tccctgttcg tgcgcaagcc gtggctgcag
      301 ctggatggcg gcggcacact gaatgccgac ctgcgcctgc gccatggcga gctgatcgaa
      361 ggcagcacag tggacattcc ctcagcggcc gccgtggccg aagttgccgg cgtgcgcctg
      421 gccggcaccg ccagcgcgca tggtgaattg aaggccggca cgcccaatca ggcacagctg
      481 gcgatccggc tgccccgttt cagtgcacgc cccagcgatg ccaaggacgt gcgcctgttc
      541 gatggtcgcg atctggccgt ggacctgacc ggcgacggcc gcctgcagga actgcgcaag
      601 ggtgtacgcg cccggctgcg tttcagcgaa gccaccattc cggatctggc cgcctacaac
      661 cgctacctgg ggtcgtcgca gctgcggctg ttgcgtggca ctggcagcct cagtggcgat
      721 gccacgctcg acaccgatgg ccgcgtcggc catggcacgg cgcgcctgct gggtcgcaac
      781 gccagcgcca aggtcgcagg cctggacatg ggcggcgatg tggacgtgaa cgcaaccctg
      841 cgccgcggcg atttcaacca gcgccacttc gacctgtccg gtaccaccgt cgaactgcgc
      901 aacgtgcagg tggccggcac agagtccagc gccgcatgga aaggccgtgc tgcgttcaag
      961 cggggccgca tcgacgcgca gtccccgttc caggtggacg ccaccaccga cctgaccctg
     1021 agcgatgcgc gccccctgct ggcggtgttc gcctcgcgca ccgactaccc gcgctggacc
     1081 ctgtcgctgc tggattccgg ccaggtcgat gcgcaggcca ggctgcgctg gcggccgggt
     1141 cacctgatca tcgacggtct gcaggccgag aatgatcgcc tctcggtgcg cgcacgcctg
     1201 gatctgctgg agcagcgcaa gcgtggcgac ctgtatctgc gctgggggct gctgggtgct
     1261 ggtgtcgagc tcgatggcga ccagcgccag tggcatctgg ccaaggcgcg cgaatggttc
     1321 gaccagcgcc cttccctgct gccttcaagc caggacggga gcgccgcggg cacttcagac
     1381 tgatcgccgc cggcctgcat ccatttgccg cctccgttcg tatgaggggg cataggcatc
     1441 atggagttgt acgcaatgaa gcggagttca caggcactgg gtcttctggg atgggtcgcg
     1501 gttacctttg cggcggccgc attgggcgcg tgggcctcca cgtccgctgc cagcttctac
     1561 gccagcctta ccctgccggc ctgggcaccg cctgccggtg tatttgggcc ggtctggacc
     1621 ctgctctacg caatgatggc ggttgccgcc tggctggtct ggcgggagcg cagttggcgc
     1681 ggtgcgcgcc cggcgctgac actctatcta gtgcagctcg cggtcaacgc cttgtggagc
     1741 tggctgttct tcggctggaa gctgggcgca ctcgccttcg ctgacatcct tgtactgatc
     1801 gtgctggtgt gcgcgacgat ccttggcttc ctgcgcatcc agcgggccgc cgcagtactg
     1861 ttgctgccct accttgcctg gatctcgttc gcctcggcgc tcaatttcgc cgtgtggcgc
     1921 gccaaccccg gggtattgtg aagcacccat cagagccctc aagcctgtgc ggccacctgc
     1981 ggctgccagg cacgcaacaa cgacggcttg aatgcctgct ggccgcagcc ggcagggcaa
     2041 cgcaccaccc gtgatgcgga atggctcacc agtccctgcc cttcctcggc cttgaacacg
     2101 gtttcgcacg acaggcagcg ggcgaccagc gagtacaggt gcagcaggcg gccactggcc
     2161 gggtcctgca gcgcatccac gtccagcagt tcgaactggc agctgtcggg cagcatgcga
     2221 tacggcatgg aaggcagggt ctgcaggttc acggtcgtgg tggctcaagg aggttggcct
     2281 acggtaggca accccgtgtg cagcgagcgt gcagcgcgca tgtaccttct gcgaaacgtg
     2341 aaagtgcccg ccgcacggcg aaaatgaaga attcagtttt caatgaaagg ctcttcacgc
     2401 ttacgaagtg gtatgcgaat gcacgctttt gcttcaccat caccggatac cggatgcagt
     2461 gctgggttgt ccccatctgg gatgttcccg tcatccatga atcatgagtg ccgcctttga
     2521 tgccttccgt tgagtccaag cacgacgttg cgctgtcccg ttgtgcacgc gaaccgattc
     2581 atacgccggg cgcaatccag ccgtacggtg tgcttctggt actggagccg cagtcactgc
     2641 gggtgcgcga gcgcgccatc agccagcccc ggctgctgca gcagttcggc gagccgctga
     2701 tgcagcacgt cagcgaggta ctgggcggcg tgctggcgcc gttcgaggcg ctgttccagc
     2761 aggccgcggt tggcagcagc gcgcatgtcg gcgccgtgca cctggacggc cacggccggc
     2821 atcaactgct ggtgcaccgc tccgccaccg acctgctggt cgagctggag tcgcccgttc
     2881 ccggccagcc gggctcactg gaggagctct acccggccat ccgcgagctg atgaccgcca
     2941 tcgagtcggc caccacggtg gaagacctgt gccagctggc cgccgaacac atgcgccggc
     3001 tcaccggctt cgatcgcacc ctggtctatc agttcgaccc cggctggaac ggcatcgtgg
     3061 tggccgagga tggcaacggc ctgttgccgt cctacctgga cctgcgtttc cccgagtcgg
     3121 acattccggc ccaggcccgc gagctgtatc gccgcaaccg ggtacggctg atcgcagaca
     3181 acaactacac ccctgccccg ctgatgcgcg ccgaggacca tcgcgacgca ccgcccaccg
     3241 acctcagcct ggcggtgttg cgcagcgttt cgccggtgca catgcagtac atgcgcaaca
     3301 tgggtaccgg cgcatcgatg tcggtgtcgc tggtgcacga aggccagctg tggggcctgg
     3361 tgtcctgcca cacggtgcat ccacgccggc tgccctacca cgtgcgcact gcgtgcgagt
     3421 tcatgggcca gatcctgtcg ctgcagattg ccctgaagga acgtgcgcgg gccattgaag
     3481 agcgcgtggc gcgccgctcg gtgctggtca agctgctggc ccgcatggcc ggcgacgagg
     3541 atttcatggc cgcactgcgc cacgacgaaa ccagcctgct gtcgctgacc ggcgccgctg
     3601 gcgcggccat cgtgcacaag ggcgactgca tgcgcgtggg cgtgtgcccg cccgcgaccg
     3661 acgtgctggc cctggccgat tggctggccg cacagcaggc cgggcaggaa acgtattgca
     3721 ccgaccatct ggccggtgac tggtcgcccg gcatgcgcct ggccggcgtg gccagcggcg
     3781 tgctggcagt gtccatctcg cagctgcatg acagctacct gatgtggttc cgccccgagg
     3841 tggtgcgcac cgtgcgctgg ggcggcgatc cacgcaagac cgccgcgccg gacgtggcgc
     3901 tgtccccgcg cagctctttc gaggcctgga aggaaaccgt gcagcagcgc agcctgccgt
     3961 ggaatgacgc cgaccgcgat gccgcgcacg agatgcgcac cgccatcgtc gacatcgtgc
     4021 tgcgcaaggc cgaggaaatg gccgagctga acgaacagct gatgcgcagc aacaaggagc
     4081 tggaagcctt ctcgtactcg gtcagccatg acctgcgcgc gcccttccgc cacatcgtcg
     4141 gctattcgga gctgctgggc agctcggccg gtgaacgcct caacgatacc gaacgccgct
     4201 tcctcgacac catcgtggaa tcggccaagt cggccggtac actggtggac gatctgctga
     4261 gcttctcgca gatggggcgc tccacccttg gccgggtgcg gctggacatg gccgcgcttg
     4321 ccgaggacgt gcgcaggagc ctggcattgg actacgccgg ccgcgacgtg caatggacgc
     4381 tggcgccgct gccggaggtg cacgccgatc cgacgatgat gcgcctggtc tggcagaacc
     4441 tgctctccaa cgcggtcaag ttcacccgcg agcgcgagca tgcggtgatc gaggtcggcc
     4501 atgagcgcag cgaggaggag gatcacttct tcgtgcgcga caacggctgc ggcttcgaca
     4561 tgcgctatgt cgacaagctg ttcggcgtgt tccagcgcct gcatcacgtc gaggaattcg
     4621 aaggcacggg catcggcctg gccaatgtcc gccgtatcgt cagccgccac ggcggcagga
     4681 cctgggccga gggtgagccc ggcaagggcg ccacgatcca cttcacgtta ccccgttcca
     4741 caggagatca cccatgaggg acctgcggcc gatcctcctc gtcgaggaca gccccaagga
     4801 tgccgagctg acactggccg cgctgtcgcg ctgccagctg ctgaacgatg tcatccatgt
     4861 acgcgacggc gccgaagcgc tggactacct gcgctgcgaa ggcaagttcg ccggcgccaa
     4921 ccacggtggc ccggtggtgg tgctgctgga cctgaagctg cccaaggtga acggcctgga
     4981 ggtgctggag caggtgcgcg gtgacgcgca gctgagcagt acgccggtgg tgatgctgac
     5041 ctcctcgcgc gaagagcagg atctggtgcg cagctacgaa ctgggcgtga atgctttcgt
     5101 ggtcaagccg gtcgatttca aggaattctt cgatgccatc caggggctgg gcatgttctg
     5161 gggcatcacc aatcagccgc cgccccatcg ccccaacgga tcggggcagc acaatgcatg
     5221 atggatcgcg ccgcagcgag cgcctgcgca tcctcatgct ggaggacagc gcgcttgatg
     5281 cggagttgat caccgcacag ctgcaacggg ccggcctgga tttcgaggtc gagcgggtgt
     5341 ggtcacgcaa caccttcatc gaggcgatcg accaccatcc gttcgacgtg atcctcgccg
     5401 accacgtgct gccgggattc gacggcgatg cggccctcgc gcttgcacgc gagcggattc
     5461 cgcacacacc tttcatcttt gtctccggca cgcttaccga ggaactggca gtgcaggcgc
     5521 tgacccgcgg cgcacgcgac tacgtggtca agcagcggct gcagcgcttg ccggatgcca
     5581 tccggcgggc acagcaggaa gcccgcgaac gcacccagct ggccgacgca caggccgcgc
     5641 tgaacgacag ccaggcccag ttgcagcagg taaccgatgc cgtgccggcg ttgatcgccc
     5701 agttcgacaa ggagcaccgc taccgctttg ccaacaaggc gttcctggac tggcacggta
     5761 tcagcctggc cgagctgctg ggccgtagcg cgcgtgatgt cagcggcatt tcagcgttcg
     5821 agcatgcgct gcccagcctg caacaggtgc tgcggggcga gcgcagcagc ttccaggtgg
     5881 agctggcgca ccgcagtggc gagtcacgct tcgtgcagat ggactgcgtg cccgaacgcg
     5941 gcgccgatgg agaggtggtg ggttacatct gcctgggcag cgacgtttcc gggctgaagc
     6001 aggccgagct ggcgctgcgc gaggacaatc agctgcttga acggcaggtg caggcgcgca
     6061 ccaccgagct gcgggccagc aagcgacggc tgcaggcgat ctttgaatcc agtttccagc
     6121 accaggtgct gctggacctt tcgggccagg tggtggatgc caacatcgcc tcgttggccg
     6181 cggtgctggc cgacaagccc gaggtgatgg gcctgcgttt cgggcagtcg ccctggttcg
     6241 ccggcaccga tgacgtcggc gcgaccgttg accgcgccat tgccgatgcc gccaaggggc
     6301 acagttcgct gcatgcgctc gacctggagt tgccgaccgg ccggcgcagc ttcgattttt
     6361 cgttccgccc gctgctggat gccgagggcg cggtcaccgc cgtggtttcc gaggcggtgg
     6421 aaaccaccgc ccggctgcag gccgagcacg cgctgcggca ggcacagaag atcgaggcgg
     6481 tgggccagct caccggcggc atcgcccacg atttcaacaa catcctcacc gtcatctccg
     6541 gcaacgtcga gcacgccatg ctgctcagcg agcgtgccgg cgagcccggg gcgatggtcg
     6601 gccgtgcgct ggacaatgcc ctcaagggcg taggccgcgc cgccagcctg acccagcgcc
     6661 tgctggcatt cgcccgccgc cagcccttgc acagccaggc cgccaacctc aacgaccgcc
     6721 tgctggacat gcatgacatg ctgcagcgtg cgctgggcga actggtgcag ctggacatcc
     6781 gcgtcgccga ggacatctgg tgcatcgaga tcgacgtcag ccagctggag gcctccgtgc
     6841 tcaatctggc cgtcaatgcc cgcgacgcca tgccgcacgg cggtcggctg gtcatcgaag
     6901 tggacaacag ccatctcgac cacgactacg ccgccctgtt ccctgatgca gcaccgggtg
     6961 agtacgtgat gctgcgggtc cgcgacaacg gccacggcat ggacgcggcc acgctggcgc
     7021 gggtgttcga gcccttcttc accaccaagc aggtgggccg gggcaccggc ctgggcctgt
     7081 cgatggtgca cggcttcgtc aagcagtccg gcgggcatgt gctgatcgat tcggtggaag
     7141 gcggcggcac cagcattacc atgatgttcc cgcgctcggc gctggccctg ccctgtgagg
     7201 gaacggcacc gcaggccggg ctggccggct attcgccgcg cgaagaaacc atcctggtgg
     7261 ccgaggacaa cgatgaggtc cgtgcccata ccgtggacgc gctgcgcatg ctgggctacc
     7321 gcgtgctgga agcgcacgac ggcccttcgg ccctgcgcct gctggagcgc cctgacacca
     7381 cggtggacct gctgttctcc gacgtggtga tgcccggcat gtcgggctgg gaactggtgc
     7441 gcgaagtgcg cgaacgctgg ccggacgtcg cggtgctgtt cacctcgggc tacccgcgtg
     7501 accacgatgc ggtcggcagc cagggccgtg cggccgcgct gctgcccaag ccgttcaccc
     7561 gcagtgatct ggcgcaggcg gtacgcaccg cgctcgaagc cgcgctgcac tgaggtcaag
     7621 gcgccggatc gcgcactccc gctgcgatcc ggttgatgtc cgcgcactcc accgtggccg
     7681 gcggatgctc ccggccggcc agcgcgatca ttgcctggcc cagtgccaga ttgctggtca
     7741 ccagcgaggg cgcgatcgcg ccggccagtt tcatcagcgg cgcgccaccc cagtacaacg
     7801 gcttcagcag gccatggcgg gtgccggtgc cttccaccgg gcgcacgccg cctggccgca
     7861 acatcaccgt gcgaaccggc aatgcctgca gtgcctgctc ggtttcgccc ttgatgcgca
     7921 gcggcatcag ccggctgccc gcatctgcgc ctgcaccgga cacatacagg aagcacccct
     7981 gcggattggc ggctgcccac gcccgggcaa cggccagcgt ggtgtccagc gtaacgcgac
     8041 ggtattcggc ctcggcggtg cctaccggtg gcgcaccggc acagtagaag caggcatcga
     8101 atcgtgccag ttcatcctgc cgcgcttcga tgtgcaggaa ctccggcacg atcagttcgc
     8161 tgccggcacc gcgcaggctg cccggatgcc ggaccagtgc agtcagctga gacacctggc
     8221 gtgagcgctg gcaggccagg gccacgccct gccccaccaa cccggtagcg ccggtcaaca
     8281 gaacccgcaa tgcaccggca gccgccacgg tcttccccct aaagcttcac gaaacgctgg
     8341 atcttccgcg ccagccagcc actgaacacc agcggcgcat ccagcgcgga cacgcagatg
     8401 cacggcacgc ccggcgcggt gacgggctgg tgctccacct cctcatccag gtccgccaca
     8461 tcgcccggcg cgaacaggcc cagcgcgtcg ttgtacgaac cgcgcaggat ctgggtcagt
     8521 tcactgcgtc cgtggctgtg catcggcagg cacttgcccg gcgcgatctt cagcatgatc
     8581 agcgatggca tctgttcggc gcggatgcag tgcacgcccg gtgccatcca gcgccagcgc
     8641 agggctgcca gcgacgcacc gaagtacggg tgcagcgacg ccggcagatg atcaggatcg
     8701 gcctccgggc gctcccgccg cggcacgctc gccgccatgg gcaggctgat gggcgactcg
     8761 ctggcaagct gcgccagcat cgcctggcgc aacgcgctcc ggcgtgcgtc accttcggct
     8821 gacgcaggtt gcgtctgttc cagcagcacc gacccgatcg cctcggcgtc gcgcaggcgc
     8881 tggcggcact gcgagcattg ctccaggtgg gcgccggcca cgatgctcaa cggcgcgggc
     8941 agcgcaccgg ccgcatagct catcaacgtg gattcgtgca ggtggtggtg cggattcacg
     9001 gcgcacctcc cactttcgac tgcagttgca ggaacgcacg tcgcagatgc gatttgaccg
     9061 tgcccagcgg catgcccagc gcctcggcaa tctcgctgtg gctcttggct tcgaaatagg
     9121 acatccgcac caatcgcgcc tgcacggcag gcagctcgtt gatgcgctgg cgcaaccgcg
     9181 cctggtcagc gaactgttcg gcactgctgc gttcgaccat atccacggtt gccgcgtcct
     9241 ccaccgccgc ctgcacctgc agccagctgc gctcgcgccg cactcgatca atatgcaggt
     9301 tgcgggcaat ccggtacagc caggtactca gcgcaccctg ggcagcgtcg tagtcggccg
     9361 cgcgaagcca cagccgcagc aggcattcct gcgccagttc ttcggccacc gcatccggcg
     9421 cccccaggcc gcgcagatag acgcacaggc gcggcatgaa atggtcgtag atccgcatga
     9481 aacagtcgcg gtcgcgcagg cgcgcgaccc tgtccatgtc accggcccag ttcgtcggct
     9541 cgctgctcgg ctgctgggaa ctggacacga tgcgtgcggt atcgaaggtg aggagagtgc
     9601 tggcggcgtc agggtacatc tgcgttcgcg gcgggcaggt gaaggtctgt cctctgtacg
     9661 cgcgtcggtg gcgattggat gcaggccacg taccgcatcc atccggccgc gcctgccgta
     9721 tgaccagggc cctccctgcg gatgacgatc atgcggaccg cctggctgct gttgtgcctc
     9781 ccccacgccg cgctggcagc cccctggctg cggaccgaag gccttgccag caccgggcaa
     9841 ggcgccactg cctatcgcga agtgcactgg cagcgcgacg cgaccgaagg cgccgaacgc
     9901 tgggtgctgt accagtgccc ggatgggcgc cccttcgccc gcaagcacct gcccgcgacc
     9961 tcccgcccgc aggcgcgcgg ctactcgctg gacgatctgc gcagcggcca gaaggtgcgg
    10021 atcgaggtgg ccggcggcag tgtcctgatc gactggaagg aggatgccga tgcgccatcg
    10081 cgccagcgcc gcctggagtt gcctgctgat gccgtgatcg atgccggctt tgacgccgcc
    10141 gtgcgccagc attggccggc gctgatgcgc ggcgagcgca tctcgctgcc tttcctggtt
    10201 cctgggcggc aacgctattt ccctgtacag gttcgccgca ctgccccgct gcgctggcag
    10261 ggggtggccg cgcagcagat cgaggccagc ctcgacacct ggtatggcag catcgcaccg
    10321 cgcctgcagc tggtctatgc cgataccgac cgacgactgc tggagttcca gggcaccagc
    10381 aacctgcgcg atgcacgggg ccactatccg caggtggtgg ttcgattcgc cgctgctgcg
    10441 cgcgcgagca gcgccagcga atggcagcag gcctgggcgc aaccgctcgt tgccggctgc
    10501 ggcgtgacgc ccgggtgaag caaaactaac agcggcagca cgcatccagt gggcattgtg
    10561 ctgcgtagag agaacacacg acccccttcg agacccctca tggcctctgc agcgcccctc
    10621 ccccgtcgcc gttggcgcct gctgcgcaca gtgcagcgct gggtcgacac cggcagtgct
    10681 gcagacagcg ccgtcgaccg ccccgggcgg atcgactggc tgcgcgcggt accgttcgca
    10741 ctgatgcatg tggcgtgcct ggcggtgatc tgggtgggcg tgtcatggac cgcagtgatc
    10801 gttgcggcgg cgctctatgc cgtgcgcatg ttcgcgatca ccgcgttcta ccaccgctat
    10861 ttctcgcatc gcaccttcca ggcgtcgcga gcggtgcagt tcgtattcgc tgtgatcggg
    10921 gccgccagcg tgcaacgcgg accactgtgg tgggccgcgc accatcgcca ccatcaccgc
    10981 cacgccgacc agccgctgga cccgcactcg ccgcgtgaag gcggcttctg gcgcagccac
    11041 atgggctggt tcctgacccg cgaggccttc gccacggacc tgtcgcgcat ccccgacctg
    11101 gcgcgcttcc ctgaactgcg ttggctggat cgcttcgaca ccgcggttcc cgtactgctc
    11161 gccgcggcgc tgtatgccct tggcgccgcg ctggagcgct gggcgccgga cctgcgcacc
    11221 tcgggaccac agttgctggt ctggggcttc ttcatttcca ccatcgtgct gttccatgcc
    11281 accgtgacca tcaactcact ggcgcatcga ttcggccgcc gccgcttcga gacccgcgat
    11341 gacagccgca acaacctctg gctggccttg cttacctttg gcgaaggctg gcacaacaac
    11401 caccacttct tcccgggaac cgtccgccag ggcttccgct ggtgggaggt ggacctgacc
    11461 tggtacggcc tgcgcgtgat ggcggccctc ggcctggtaa agggcctcaa gccgattccc
    11521 gagtgggtgc tggccaaggc gaggtactga catgcgcatc gcgatcatcg gctccggcat
    11581 tgcgggcctg gccagcgcct ggtggctgga cggcgaacac gaggtcacgc tgttcgaggc
    11641 caacgattat ctgggtggcc atacccatac ccacgacgtg caggtggatg gcctgcagat
    11701 ggcggtggac accggcttca tcgtcttcaa tccgttgcac tatccgctgc tgacggcatt
    11761 gttcgacgaa ctgggcgtgg cgtcccaacc gacgacgatg agcttctccc tgcacagcga
    11821 gcgcagcggc gtggagtaca atgccacctc gctggacggg ttgttctgcc agcgccgcaa
    11881 cctgctgtca ccccggttct ggggcatgct ggccgacctg cgccggttct accgggacgc
    11941 gcccctgctg ctggccgagg atgaaggccc caccctgggc cagtacctgc atgaccagca
    12001 ctacggcgag gcattcatcg aagagcatct gctgccgatg gcatcggcgc tgtggtcctc
    12061 ccccacccgc tcggtgatgg agttcccggc ccgctacctg gcccagttca tggccaacca
    12121 ccagatgctg cagatgaccg ggcgctcgcc ctggcgcgtg gtgagcggcg gctcggcgcg
    12181 ctatgtcgac gcgttgcgcg cccgctggcg cgtgcgtgag cggctgcagt gcccggtgca
    12241 ttcggtcgag cgcatgccgt ggggcgcgcg cgtgcacagt gccgccggcg tggagggctt
    12301 cgatgaggtg atcctggcgt gtcacagcga ccaggcgctg gcgctgctgg gtgacgcaga
    12361 ccctgtcgaa cgcgaggtgc tcgctgccat ccgctaccag cccaacgaag cggtgctgca
    12421 cactgacgca acgctgctgc cgcgcaaccg caaggcctgg gccgcatgga acgcgcatgt
    12481 gccgcgtgac cctgccgcgc cctgcacggt cagttactgc atgaacctgc tgcagggcct
    12541 gcccggtgac acgccgctgg tggtgacgct caaccgcagc gaggcgatcg acccgaccaa
    12601 ggtcctgcgc acgctgtgct acgcccaccc ggtgcacgac cacgcagccg tccgggccca
    12661 gcagcgctgg cccgagctgc agggccgtcg ccacacctgg tttgcgggcg cgtactgggg
    12721 ctggggcttt catgaggatg gaatccgcag tgcacggcgc gtggtcgatg cgctgcgtgc
    12781 ctgcgagcca caccggctgc tgccggcggc cggcgaggtc gcggcatgag cgccagcgcg
    12841 ctctatttcg ggcaggtgat gcatcggcgg catcacccgc acccgcatgc gttccgctac
    12901 ccgatcgcgc agctgctgct cgacctggac gagctcgata cggtgttcgc tggccgctgg
    12961 ctgtggtcga tcaatcggcg caacctggcc gaattccgcc gcagcgacta cttcggtgat
    13021 tccacgcggc cactggccga tgcagtacgc gaccatgccg cggccaccct tggcttccgg
    13081 cctgccggcc cggtgcgcct tcttacccac ctgcgctttg ccgggcatgt gttcaatccg
    13141 gtcagcttct actactgcta ccagcccgat ggcagcaccc tggactgcat cgtggccgaa
    13201 atcaccaata ccccgtggaa ggaacggcat gcctatgtgc tgccggtctc cacggccacc
    13261 catgaaggca cctccctgcg ctggcagttc gacaagcgct tccacgtctc acccttcatg
    13321 ccgatggact gctgctatga ctggcgcttc aacctgcccg gcgatgacct gcgcgtgcac
    13381 atgcaggtct ggcgcgacgg tgtccgccag ttcgatgcca cccaggccat gcagcgccgc
    13441 gcactggatg gccccggcct ggcgcgggtg cttgcccgct atccgctgat gacgctgcag
    13501 gtggtggccg ccatccactg gcaggccttg cgcctgtggc tgaagcgcaa ccccgtccac
    13561 gaccacccca accttgccgg gaaaccgcga tgaactcgat gactccttcg gtcgcgctgc
    13621 cgcgccccgg cgcactggat gccttcctgc gccgccgcct gctggcccag ctcgccccgc
    13681 tgcgcgaggg ccggctgtgt gtgcgtgacg cgctcggcga agtctggctt ggcgatgccc
    13741 ggggcgaact gcatgccacc gtcaccatcg aggacccggc gttctacagg aaggtcgccg
    13801 cgcaaggcag cgtcggcgca ggcgagagct acatcaacgg tgaatggcgc tgcgacgatc
    13861 tggtcacgct gatacggctg ctggtacgca atcgcgatct tctcgacagc atggaacacg
    13921 gcccggcccg cgtcggcggt tggctgctgc gcggctggaa ccgcctgcgc cgcaacagcc
    13981 gtgaaggcag ccgccgcaac atcgccgcgc actacgatct cggcaacgac ttcttcgccc
    14041 tgttcctgtc gccggacctg atgtattcct cggcgctgtt ctccgatgaa agcgaatcgc
    14101 tcgaatcggc ctcgcggcgc aagctggacc gcatctgcca gcagctgcgg ctcagccctg
    14161 gcgatcgcgt ggtggagatc ggcaccggct ggggcggctt cgccgtgcat gccgctacgc
    14221 actatggctg ccacgtcacc accaccacca tttccgccga acagcatgcg ctggccgcag
    14281 agcgcgtgca ggccgccggc ctgcaggacc gggtcaccct gctgatgcag gactaccgcg
    14341 acctgcaggg ccagttcgac aggctggtct cgatcgagat gatcgaagcc atcggcgccg
    14401 agtacctgga cacctatatg gcgacgttgc agcgcctgct gaagccggac ggcgtggccc
    14461 tgctgcaggc gatcaccatc gaggatcacc gctacgagca ggcccggcgc agcgtcgact
    14521 acatcaaacg ctacgtcttc ccgggtagtt tcattccatc gatcaacgcg atcatggcgg
    14581 ccaagacccg atccagtgac ctgcagctga tcgcccagca ggatttcggg cactcctatg
    14641 cgctgaccct gcgcgcctgg cgccagcgct tcctggcgca gttgcccgcg gtgcaggcac
    14701 aaggcttcga cgcgcgcttc tgccggctgt gggagttcta cctggcgtac tgcgagggcg
    14761 gcttcctcga gcgctcgatc ggcgtctcgc acctgctgct ggcgcgcccc ggccatcggc
    14821 cgatcacgga tgcgggcggt gggcactgag atgggccgct tctgggccaa cctgctcggc
    14881 aaccaactgg tctggctcag cgccgtggcc ggcgccggtc gcggctggca atggcccgca
    14941 ctgctggctg cgttgttgta catcggcagc cagctgctca cgtccccaca gccgagactg
    15001 gacctccggc tgctggcatg ggcgctggcc tgcgcctggc tggtcgatgc cagcgcagcg
    15061 gccagcggca cggtgcgtta tgccgccgcc gcgttcggtt gggcgccgcc gccgtggatc
    15121 atggcgctgt gggcggcgtt cgcgatgacg ctgaccactt cgatgcgctt cctgcagcgg
    15181 catgccgcgc tgccgatgct gttcggcctg ctgctggcgc cactggccta cctctctgct
    15241 gcgcgcggct tcgacgcggt gcggtttgca gcgccggcat ggcacggctt gctcgtgctc
    15301 ggcgttggct ggagcatcgc gctttccctg ctgtgcagcc gtgcccggcg cggatcgcgc
    15361 ggcacgccgc agccacccct cgctggagcg ccgtcatgat cgacctgtta tgggtgctgt
    15421 tgtacgccgt gctgataatg agctggggct gggcctggca acgccgccac acaaacatcg
    15481 gtgtagtcga tgtgctgtgg gccaagggcg tcggtgcatc tgcactgttg cttgcgttgc
    15541 ttggcgatgg cgcgctggtg ccacggatgg cgctgggcgt gctcggcggc gtgtggggca
    15601 gccgcctcgc cctgcatctg tggcatcggg tccgtcacga agcggaggac ggacgctatc
    15661 gctacctgcg cgagcactgg cacggccacc agggaaagat cttcggtttc ttcatggccc
    15721 aggccctgct gatcagcctg ttcgccctgc ccttcgtcgc ggtggcggcc aacccacggc
    15781 cggggctgac gatctggatc gtggtcgctg cgggggtctg gctgctcagc gtggggggtg
    15841 aagcgcgggc cgaccgccaa ctggcccgct tccgcgccaa cccggccaac aagggccgca
    15901 cctgccggga tggcctgtgg cgctactcgc ggcacccgaa ctatttcttc gaatggctgc
    15961 attggttcac ctatgtgctg ttggccgtgg gttcgccact gtggtggatg gcctgggttg
    16021 ggccgctgct gatgtatgtg ttcctgcgct acctcagcgg catcccgttc accgaaaagc
    16081 aggccctgcg cagtcgcggc gatgactatc gcgagtatca gcgcacgacc ccgatgttct
    16141 tcccctggtt cccccggcct tccaaggagc attccgcatg aacgcgatcc cgtcacagaa
    16201 ccccaccgaa gcgggtgaga gcgggctgat cgcctgggcc gagcgcggct gggttccgga
    16261 tgcagccttg cgcgctggca tccggcgcct gtgcgcgcag cgcctgcacg aggaagccga
    16321 gggcggcatc gagggccagt cggcccgctt caaccgccgc atcgccgaat tggccgacag
    16381 cccactggcg ctgcatgccg atgccgccaa ccgccagcac tacgaggtgc ccgccgcctt
    16441 cttccaggct tgcctgggca ggcagctgaa gtacagcagt tgctactacc cgaccggcaa
    16501 cgagacgctg gaccaggccg aagacgcgat gctggtcctg tacggcgaac gtgccgggct
    16561 cgccgatggc cagcacatcc tggagctggg ttgcggctgg ggctcgctga ccctgtggat
    16621 ggccgagcgc tatccgctcg cccggatcac cgccgtgtcc aactcgaaca gccagcgcca
    16681 gcacatcctg gcgcagtgcg cgtcgcgagg gctgcacaac gtcgaggtgc tcacccgcga
    16741 cgtcaaccag ctggaactgc cacacgcgca gttcgaccgc tgcgtctcgg tggaaatgtt
    16801 cgaacacgtg cgcaactaca agcgcctgct cgcgcgcatc gcgcagtggc tgaagccgga
    16861 cggcgcgctg ttcgtgcaca ttttcgcgca ccgcacgctg atgtatccgt tcgagaccga
    16921 cggcggcgac aactggatgg gccggcattt cttcaccggc gggctgatgc ctgccgccga
    16981 taccctgctg cacttccagc gcgacctgca gctggagcag cgttggctga tcgatggcac
    17041 ccattaccag cgcaccgccg atcattggct ggccaaccag gatgcggccc gcgaccgcgt
    17101 gatgccggtg ctggttgcta cctacggcga agcggccgca cggatctggt ggcagcgctg
    17161 gcgcatgttc tggatggcct gcgctgaact gttcggctac gacgatggcc agcagtggct
    17221 ggtggcccat tacctgttcc gtccccgctg aggtgtcgca tgcgcatgtt ctcgttgctc
    17281 cccctgctgg cggtcggact gttcggtacc ggttgcagct ccaatgacac actccccctg
    17341 ccacgcccgc catcggtgga cgtgcctcga ttcatgggcg actggtacgt gatcgcccac
    17401 attccctcgc gtcccgagcg cgaagccttc gatgccgtcg agagttacgc actgcggccc
    17461 gatgggcgca tccagaccac cttcacctat cgcaagggca gcttcgacgc gccacagaag
    17521 tcgatgcacc ccatcggccg ggtcgaaaag gaaggcaacg gcgcggtgtg gggcatgcag
    17581 ttcatctggc cgatccaggc cgagtacatc atcgcctggc tggccgatga ctacggccag
    17641 accatcgtgg cgcgcagcaa gcgcgactac gtctggtaca tggcacgcac gccacaggtc
    17701 tcggacagcg actaccagca ggcggtgcaa cgcatcgcgg caatgggcta tgacacccgg
    17761 aagctgcgac gggtaccgca gtcggtgcga tgacccctgc tgcggccctg cgcggccgct
    17821 cggccagcct ttcgcaccag gctgacactc cgcatccacg gtgttgatgc ggcagctcgc
    17881 acactgcggt tccccacgtg aaacaggcac catcggcatg catcccgaat cccgcccgca
    17941 cacctgcagc ctgctgctgg tggaggacca gttcgacctg gccacactga tggagcaggc
    18001 gctgcagcaa gagggcgacc aggtcacgca tgcctacagc gtgttcgatg cactggaact
    18061 gctcgacacc cggcagttcg acggcgccgt gctggatgtc gaactgcgcg acggcgtggt
    18121 gtttccggtc gccgatcgcc tggccgcgct cggcgtgccc tatctgttcg tgtcggcggt
    18181 ctatgaccag ctggtgccgg cacggcatcg cggcgcccct ttcgttgcca agccattcca
    18241 tctcgaaaag ctgcagcgag ccgtgcagca agccatcagc ggcagccccg ccattgcatc
    18301 gccggggccg gaaggcgccc ctcgcaatcc agcgcaccca caggaggcag ccgctcccgg
    18361 cactcaatcc agcgcgaacc ccgcaaccct gccttcttcg tcggggcgga tcatgtaggg
    18421 catgaagacg ccggggccga acgtcgccac gtagcggtac atcgtgccct tctcgccggc
    18481 ctgcgtgccc ttgaagacca gggcgtccgg cttgccatag ggcccgaccg ccttcgccaa
    18541 cccggcaccc agccccgcct ccagccttgt acgcaggttc gcgctgaaat ccgcatagcc
    18601 gcgcccggcc tgcaactgtt caaacgtggc ccgtgcccgt gccgtcacgg cggcgtcttc
    18661 gccaggcgcg ggctggctcc acgcagcgac gatggcggga tgaagcgcac tgaagaccgc
    18721 attggtcagc gtgatgccgg cctccggcgt cttgtctccc agattggtga aggcaatgat
    18781 gcgcagccca agttcgggaa agtactcgtc agcggtggtg aacccctgcg agccgccggt
    18841 atggccgatc ctggcctggc cgtagaccgc attgacgaac aacccgagcc catagtcggc
    18901 gctaccgccc tcagcggtgt gaaccggcgt gatcatttcg cggtagccgg cctggctgac
    18961 cacccgcccc ccgctcaggc cacgatccca gcgcgcgaga tcgtccagcg tactgaccag
    19021 aaagcccgca gcgccactcc agtccgggtg gaaatagggt gatcggcgca ggacgcccgc
    19081 ctcgtgccga taccccaccg ccatgccctg cagtcgctcc gtatcggcga gggtgaaggt
    19141 gtgccgcatg tccagcggct ccagcagatg ccggcgcacg tagtcgacgt aacgctcgcc
    19201 cgataccacc tcgatcaccc ggccgagcag gatgtacccg gtattggagt acgaccagcg
    19261 gctgcccggc gcgaaatcga gaggacgatc gcggatgcgc gcgatcagcc gatcaaacgc
    19321 aatcggctgc gtcaccaggg catcgacctc ctgttcgggc ccgtcgaaat agtcgtgcag
    19381 gccgctggtg tgggacagca gctggcgcag ggtcacctcg tgcgcatgcg gggcgtccgg
    19441 caggtacctg gccagcggat catccaggct gagcttgccg gcctcctgca gttgcacgac
    19501 cgcagcggcg gtgaactgct tggtgatcga gccgatctcg aagggcgtgt cggtgcgcac
    19561 cgccaggccc cgcgccaggt cgcgctggcc ataggccttg gcgtgaatca agcgcccgtc
    19621 ctggagcacc atcaccgccg caccgggaac attgaagcga cgcatgacct ggccgacacc
    19681 gcggtcgatc ccctggatcg ccgccgcatc cagtggggcg ctcgccctgc tcgcggcgtc
    19741 gctgcgcggc ccttccgtgg caacagcggg ccgggcactg ccgatcgtca ccagcagcag
    19801 gcccgccagg gccatccaaa agcgtgccgt gcgcattccc gcccctatta ttcaaatttg
    19861 aactatagtt tgaattatga aatccgccac tgcaagccac tccagcccag caccgctcaa
    19921 gctgacaccc gcccagcttg ccgcgatggc ctcgcccgca cggatggcga tactgcagcg
    19981 cctggacgcg gagggtccgg ccagcatccg cgaactggcc gagcgcctgg gccgccccgc
    20041 caccgcgctc taccaccacc tggcgcacct gcagaagcac ggcctggtgc gcatcaccga
    20101 acatcgcgac accggccgcc gccccgaagc cgtctacgcg gcggcctcat ctcagctgtc
    20161 ctcccgtgac gcggtgcgca ccccatccgg ccggcggagc cttgttcgcg tggcgacacg
    20221 cgtggtcgcc gccaccctgc gcgcgttcgc ctcggccgcc acccaggccg ccgcccgctt
    20281 tgaagggcca cagcgcaact gcgcggtcag gcacctgtcc ttccgcgccg atgacgagca
    20341 actcgcccgc atcaacgcat tgatcgaagc gcttgaggcc accgcgctcg acgccggcac
    20401 gcagggcgac cccctgctgc tgaccgtact gatggcgccc gccgcacaca ggccgcgcgg
    20461 accctcgacc tgaccgccca tgcatcgcta ccatcaatga acattgccaa gttcgatatt
    20521 cattgacgat cgaaacttag gaataatcgc aaaaatccga caaattcaat gtgcggcatg
    20581 acaacggcgc cagaatgatc gccacgcccg cgggcgctga ccacctctgt gcgcatgaat
    20641 ggatatcctg caccgcgcct gttgcgcctg gcactattgg acgatcacga agtggtccgt
    20701 cgcggtaccg cactgcacct gtcccaggac gcccgcttca gcattgttgc cagccacggc
    20761 cacagcgacg cgttcatcca ggacctgcat gcaacgccgg tggatgtggc catcatcgac
    20821 ctcactctgg cgcgcgggga ccgcgactgc atggcgctgg tggagctgct gcgcgcgacg
    20881 ttccccgcca ttcccctgct ggccttcgcc accctgtcac ccagcataca tatcggcccc
    20941 ctgatcgacg ccggcgtcag cggcgtggtc agcaaggctg agccgctgcc actgctgtcc
    21001 gaggcaatcg tacgcgtgtc gctggggctg gaccggctgc ctcccgactg ccggcatccg
    21061 gcagacggcg aagatctcag ccgcaacgaa cgtgaagtgc ttcacctgct gctggccggc
    21121 cttaccgtct cggagatcgc ccagttgcgc catcgcagca tcaagacggt cagcacgcag
    21181 aagaagtccg cgctacgcaa gctgggcctg cgcaacgatg cagagatcta tgccatgcga
    21241 catcagctgg aggcactgtg aaccggcgcc atcgcccgca cttcgcccct gtcctgctgc
    21301 tggccctgct cctgttgccg acggtctcgg ccggggatgc accgtcgcaa cgatgggcgg
    21361 cgggccgcga ggtccgcgtg gccaccgcgc cctcgctgcg ccccttgcca ccggcgctgg
    21421 ctgatacggc tccgctgccc acccttgccc atggctacgc cacgcttgtg gcacgccact
    21481 cgcagctgcg cttcaccgaa cacccctacc ccagcacggg ctcctcggta gtcgcggtat
    21541 gccggggcga tgccgacctg gtactggtca tcggcgcggt caggccactg caccagccct
    21601 gcgccaacct tgttgcctcc actcccttcc gcggcggcag gaccgtcctg gccggccgga
    21661 acggagggcg cctcccgcac gatgttgcac aactggaagg acgcacactg gccgtcgtca
    21721 atggcgggcc ctacgccgag tggctgcagg cgcatcatcc acacctccgc ctgctgcacc
    21781 tgcccgatcg gcacgcaaca ctggtggccg ttgaaacagg tgccgccgat gtcgcaattg
    21841 gcctggaatc gacgctgcaa ccgatgatcc ggcgacactt cggcggcacg ctgcaactgc
    21901 agcccttcga aagcgcgttc tccaccgacc tgtacctgct ggtgcgcagc attgaccgcc
    21961 aactgctggc gcgcatcgac caggcactgc aggacatcac gctggaagag catgccggcc
    22021 ttctgcagct ctgggcccgg caggcactgc ccgcctcgat ccagcgcatg ttcgatcaga
    22081 tgcgcatgcc accgccgcac tggcttctgg ccttgatcgc agtgctggcc ggcctgccga
    22141 tcctgtggca cgtcgcggcc cgtcgcacca ggcgcgaacg ccgtcgccat gcccgcgcgg
    22201 caggcatggt cagccatgaa atgcgcaatt cggcgcaggc gatgctgatg tcgatcgacc
    22261 tgctgggccg gtcacccctg gccagcggtc agcgcgaact actggcggcc gccacggcgg
    22321 ccgggcgctc gctgcgcagc ctgttgaacc ggtcactgga tttctcgcgc ctggccggcg
    22381 gcggcttcaa gccgcatgtg ggcgcctgcg atgtggcgtc tctctgccag caatcgctgg
    22441 acgcgatccg gccaaaggcc cggctgaagg gattgcagct tcgattcgac tgcagccccg
    22501 accctgcgcc gacgatcgca ctcgatgcag aagcactgcg gcagattgtc gacaacctgc
    22561 ttggcaacgc ggtgaagttc accgatgtgg gcggcatcga tctgcgcgtg caactgatgc
    22621 cgccggtcca gccccgggca ctggtgctgg atgtgatcga cagcggcatc ggcattgatg
    22681 cccgccacgt cgggcggctg ttccgcgcct tccagcaggg cgaggacggc cagatgcgcg
    22741 gcggcagcgg cctgggcctt tccatcgccc gcgaactggc ccgcgccatg cgcggcgacc
    22801 tcaccgtgca gagcgtcgtg ggacgcggca gccgcttcac cctgtgcctg cccgtacagg
    22861 gcgctggcga cgatgttgcg cccgcagagg accctgccgc cggccgtcca cttgccggcc
    22921 tcgaccttct gctggttgaa gaccatgcat tgaaccggca gatcatcgcc gagcagttgc
    22981 gtcggttcgg tgcgagcgtg cgtgccgttg ccgacgctgc aggcgcgctg aacgagcaga
    23041 gccgcagccc gcgccggatc gtgctgctgg atatcggcct gcagggcatg gatggctacg
    23101 cactggcgca gcaactgcgc agccaggcca gtgggccgct gcggctggtg gcgctgtccg
    23161 cccgtaccgg gcgcaggcac ctggcgcgct cgcgcaaggc cggattcgac gccgttctga
    23221 ccaaacccct gcaggttgcg cacctgctgc aggcgctgca gctgacgccc atcaccggta
    23281 ttgcagcccg cacgcccctg gcagcgctgg accacgtcca tctggccgat atccgcggcg
    23341 aactggaagg catcgagcgg gcgctggccg atcacgatgc aagggccatg cgccatcatg
    23401 cgcaccgcct gcaagggaca cttcagatct gtggcgccgc tgcccaggcc gacatcgcgg
    23461 ccgatctgtg ggaactgggt catgatgccg cgacggactg gatcgacgcg cggcgactgc
    23521 tgcagttgct gtggcactgg catggctccc gcactgcgga agccatgcct gccaactgat
    23581 caggcggcca gacgctcgac ctggcgacgg gtcaggtcat tgaagcgacc cagcgacatc
    23641 aggtgctggt ggatcagcgc cagccagccg ctgcggtgcc actcgaccac ggtggcttcc
    23701 ggcagcgcaa cgaacttttc gacgtcgacc acctggaaac cattgaggtt gaactcgcgg
    23761 ccatccgggg tacgcacggt ggcgttgcgc tcgaccagca ggccgttgtc gatcagggcc
    23821 ttggagaagg cctgggtctg ctcgtgctca cgggtgaact ggccgcagaa ttccagcgcc
    23881 tgctgcacca tgtcggtggc cttgccgtcg acgaacagcg gctggccttc gtcaccgccc
    23941 ttgaccacgc gcgggctctc ttcatcgatg cccagcagga agtcgttgtc cgcaccggtg
    24001 tcgatgaaga tgaagggatg gcgacgcagg taggccggga tgtaggcctc gtcttcccac
    24061 aggccgtcct tgatgaacag gttctcttcc gacacgccga cggcggccat cggcaccgcg
    24121 gtcgggccgg cgaacaggat cgggaagtgg tgcagcgcca gcgagaactc gcccagcacc
    24181 agcggaatgg cgttgttgcc ggcggcgaac tcgagcttgc ccggcaggac gcgcagatcg
    24241 gcgtgcacat cggcctgcag cggcaccgga cgggtgtaga acaggggagc gccgctcggc
    24301 gccgcttcgg tggtggtgtc gctggtggtg gtcatcttgg gaaccgttcg atcatgcgcg
    24361 cctgccatcc cgggcgcgcc agcgggaaca acctgaatcc cgcattatca acaagctcga
    24421 tgacaagggc caccccggcg agggcctatt tcagctgcag ggggtatcgc tgccacagca
    24481 cgtggacgag aaaaccggcc agttcggtat cacgggcgct caccgcagcg cggatcttgt
    24541 ccagcagcac catgtccgag cacgagcgca catcggcgtg attggcctgc cctgccctgc
    24601 gcgcacggta gcgcgcagcc cgctgtgcat cactcattgc gtacccgaac ttgggcggac
    24661 gaccgcgctt gcgcggcagg gtcagctcca gggttccggg gtctttgtca tcacgcatgg
    24721 gcggggtgcg ggcggcggcg agcaacgggg ggtgcgcaat ttatcgtgag gcatcacttt
    24781 aatccagctt tttctgcagt tttgttgcaa tgcagtgcaa atgcatcacg cctccggcag
    24841 cagaaccacg ccacgcgtgg atgcctcacc gtggcccacg caaaaaaggg agcccgcgaa
    24901 cgggctccct tcaccttcct catgcagcgc gtacgggctc gtaaccgtgc agatgcgcct
    24961 cgctgctggc ccgcccctgg ctgagcgaac gcagcgaggt ggtgtagccc accagctgcg
    25021 ccaacggtgc gaatccgctg acctcggcgc gaccgtcctg gtcctcgatg cgggcgatgc
    25081 ggccgtgacg gcgattgagg tcgccgacca cgtcgcccac cgacgccgag ggcgaatgca
    25141 ccgtcaccgc catcaccggc tccagcagct gcgtgccgcc ttctgccagt gccgccttga
    25201 tcgcctcggc gccggcgcga tggaacgcca tttccgagga atccttggca tgggtctgtc
    25261 catcgaccag gctgacctcg atgccgacca ccggatgccc ctgcgggcct tccgacagcg
    25321 cggcgcgcac gcccttctcc accgccgcga tgaagctgcg cggcaccacg ccaccgacga
    25381 tgcgatcgtt gaacacgacc tcaccgtcct cgcgcggcgt cacgtccagc accacctgcg
    25441 cgaactgccc ctggccgccg gtctgcttga ccagccggcc gaccacgccg gccactgcac
    25501 gcatcggcgt ctcctggtag gccacgcgcg gtgcgcccac gcccacctcg accttccatt
    25561 cgctgcgcag gcgctcgacc atcacctcca ggtgcagttc gcccatgccc cagaccaggg
    25621 tttcggccgt atcgcgatcg gtttcgacgc ggaacgacgg gtcctcctgg gccaggctgg
    25681 ccagcccctg cgccatccgg atcaggtcgg cggcacgcgc cggctccaac cgccatgcca
    25741 gcaccggcgc ctgtgcctgg atgttctcca ggcgcaacgg ctgcgcacgg ccgctcagcg
    25801 tttcgccact gaccgcatcc ttccagccca gcaccgcgac gatgtcaccg gccacggcct
    25861 gttcaatgtc gtgggtctgg tcggcctgca cccgcaccag gcggctcaca cgccgtccct
    25921 gcggatgctg cgaactggcc accgcatcgc cgaccttcaa ggtacccgag tacagccgca
    25981 cgaaactcag cgcaccgtgc tgctggtggg tgatcttgaa cagcaggccc gccaacggac
    26041 cgtccggatc cggcggcagc accacctcgc cgccctcgct ttcagcgacc acggccgggc
    26101 gatccagcgg cgatggcagg taatcgacca ccgcgtccag cagcgtttcg atgcccttgt
    26161 ccttgaacgc cgcgccggcc agtaccggca caccggcacc ggccaacgtt gcgcgccgga
    26221 tggctgcacg cagctgttcc gcatcgatca cacggccttc cagccaggca tcggcaagtg
    26281 cttcatcgtg gtcggccacg gcctcgacca gcgcatcgcg ttgcgcctgc cactgcctgc
    26341 gcgctgcgtc gtcccatggg gtgatcgtcg ccgcagcacc ttcgtgccac tgcagcaccc
    26401 gctcatcgac cagatccacc cagccgttga agtcgctctc gctgcccaac ggcacgccca
    26461 gcgcccatgg tcgcgcacgc agcttgtcct gcagctgctc cagcacacgc tcgaaggaag
    26521 caccgacgcg atccatcttg ttgacgaacg cgatcagcgg cacgcggtgg cggcgcgcct
    26581 ggcgccacac ggtctcggac tgcggctgca cgccatccac cgccgagaac acggccacgg
    26641 cgccgtcgag cacgcgcagc gagcgctcga cttcaatggc gaagtcgatg tggccggggg
    26701 tgtcgatcag ggtcagccga tgcgacggca ggtcgcgcgg cgaccattgc gcctgcacgg
    26761 cagcggcgcc gatggtgatg ccacgttcgc gctcgatcgc cgagaaatcg gtggtcgcat
    26821 tgccgtcgtg cacttcgccg acgcgatgga tctcgccgct cttccacagc aggcgttcgg
    26881 tcagcgtggt cttgccggcg tcgatgtggg caatgatgcc gaggttgcgg cgacgggaaa
    26941 gggtctgggt gttcataaag aggttcctgc aaagccaact tcgggggccg cgcactccgg
    27001 ttggcgacag ggcgcgcggc tagcgttcgg tctcggcgat ctggtgcatg gcacgttctc
    27061 cttgcggtac atcgggttac ggggaatgga actgcggaaa cgaaaagagc gccccgaagg
    27121 gcgctctgtc gaaggtccag cgatggccgt ctcaacggcc tcgtggggct ccaggcagac
    27181 acgcccgttc cgcgcttgcg cgggtcaggg tgaaaaactt caggagcggc atccggttca
    27241 tggggcgcat tctagacctg ccaatctggc gcgcaagtga atattgcaca cattaatgga
    27301 acgatgcgca ccactgcaga cccaccccag gggcggctgc aatcggtccc tggcgcctta
    27361 cttgcaccca tgcagcgtgc gagcctccgc cacggtcgct gcacggtcat cccccatcga
    27421 gacccatcct ttcagcgaca tcgccggatc cacctgcgcc tggcgcgggc cgccatggat
    27481 caacacctcg gtccagctgc cgaccggcac cagctcggac aatctcgccg cttggtcgtc
    27541 ttcggtgctg aacatggcat ccggcgacgc gggcttggcg ttgttcacgg tctcggtctt
    27601 gcgcacccgg acccgcagcg cgccatccgg catgcgctgg gtcataacct catggcgttc
    27661 gacgccgtag gcccacgtgt tctcgccaac gccacgggtt tcgctgccgt catccgcgac
    27721 cgccaccacc tcgcctgccg gcccgatcac tcctgccacc gcacccaatc ccgacatcag
    27781 tgcctggtag acaatcatct gccgctgctc ggtcgtcagc gaaccggcat ccgccttgcc
    27841 cgcagacaac ttcagatagg ccgcctcctt gcacaacacc aggacctgct ggtcatccca
    27901 gctcaccgac atttcctcgt tggcgaagta ctgcgtcttc aacgacgtaa cggcgccacc
    27961 cttaccctct gaatgccgcg tttcgatcaa cgaggcgttc tcggctgcat cggtgagtga
    28021 taccggagag gtggcagccg cgttggcggc gcacacggaa gcaagcaggg cggcaagcag
    28081 cacgccgcgc ggagcggtac ggaacatgga atcagtccat tgaagaagac gaaaccgcca
    28141 tgatacgcgg tgaaggcaca cggacgtccg ctcaggtcac caccaccagc ggcacaccac
    28201 gtcgcggatg ctgcagcacc accacatcct gctggtagac ccgctgcagg ttgtcctcgg
    28261 tcagcacctg cagcggcgtg ccgtcggcgg ccaccctgcc ctgctccagc agcacgatgc
    28321 gatcggcata gccggccgcc agattcagat cgtgcagtac tacgatcacg caggcacccg
    28381 cttcggcaca ggcacgcacg ctgcgcaggg tgcgctcctg gtgacgcagg tccagcgcgg
    28441 cggtcggctc atccagcagc agcagcggcg tgtcctgcgc cagtacccgc gcaaacgtgg
    28501 tgcgggcgga ctcgccaccg gacagctgct gcacttcgcg caggcgcagc gcctgcagtt
    28561 cggcagcatc gatggcacct tcaacgtgag cgtcatccgc cacaggatcc ggcgggtgcg
    28621 gcaggcgccc catcgccact acctcttcca cgctgaaggc gaaacgcacg ccgtgctcct
    28681 gcggcatcac cgcgcgctcg cgtgccagtg gccccgcctt gtagcctgcc aatggtttgc
    28741 cgcgcaggct cacctcgccc gcatcggcgc gaagatcacc ggccgccacc gccagcaacg
    28801 tggatttgcc cgcgccattc gggcccacca gtgcggtcac tgtccccggc tcgaatgcga
    28861 gcgagatgcc atgcaggatc tcgcgctgct ggcggcgcac caccacctcg tgcagtttca
    28921 acagcacgct catggcgcgg ccttgcggcg ctgctgcagc accagccaga ggaagaacgg
    28981 cgcgcccagc gcagccgaga acaggcccag cggaatctcc gccggcgggt cgagcgtgcg
    29041 cgccgcggta tcggccacca cgatcagcag tgcgcccagc aggccggaca acggcagcag
    29101 ccagcgatgg ccgggaccaa ccagcaggcg cgccacgtgc ggcaccacca ggccaacaaa
    29161 gctgatcgaa ccggcaaagg ccaccgccgc gcccaccagc agcgcactga acgcgaccag
    29221 gcggcgacgg gtgcgggtca cgtccagccc gaggtgctgc gcctggcgct cgcccagcgc
    29281 cagcatgtcg aggggcgtgg ccagccgttg caacgcgaac acgccgatcg cgaacaaggg
    29341 caccaccgct gccacatcgg cccagttggc gcgcgccaac gaacccatct gccagaacac
    29401 cagcgattgc agttcgcttt cactggcaat gtaggtaagg aaaccgatca gcgccgagca
    29461 gaacgccgcc atcgcgatgc cgaccagcag cagcgtggcg ttgccactgc ccttgcccgg
    29521 gcgcgccaac gcgtaggtca ggccaatcgc cagcgcgccg ccaacgaatg cggcgaccgg
    29581 caccagccaa cccgccgcac cggcagcgcc gagcacgatg gcggccaccg cacccaatgc
    29641 cgcaccctgg ctgacgccaa cgatgcccgg atcggccagg ggattgccga acaggccctg
    29701 caggctggcc ccagccatcg ccaacgatgc gccgaccatc gcccccagca gcgcacgcgg
    29761 gatgcgcagc tgccagacca cggccaggtc acgactgctg accgcctgcg aatcaagcag
    29821 gcccagcttc acgcccagcg cctgcaccac ctccagcggt ggcagccgca acggacccac
    29881 ggcaaacgac gccaacaccg cccccagcag tgccagcaac gccaccatca acatcatccg
    29941 cccgcgatgg cggcgccgat ccgccggact catgccttcg gcaacgccgc cagggccttg
    30001 gccagttcca gcgcaccggc accggaacca acactggtgt acttcagctg cacgtccggc
    30061 atcacccaga cccgattggc ctgcccggcc ggggtctgct tcagcgtcgg ataggacttc
    30121 cacaggcctt cggccccgcc gaacagctgc aggtcatgct cggtcaccag aatcacctcc
    30181 ggggctgccg cgaccacgcc ctcgttgctc agctgcgagt agttcttcac ccccgcctcg
    30241 gtaccgatgt tgacgccacc ggccagcgca atcagctgcg ccgaggcgct gtcggcacca
    30301 gccacggtcg gcgcgccgcc ggcgccggtg gccgaaacgt ggatcacccg tggtgcatgg
    30361 cccaggccct tgccaatcgc tgcagcctcg tccagctggc gctgcacctg cgtggcaagc
    30421 gcctgccctg cctcggccag cccgagtgca gcggcgacct tgcgcacctt gtcaggtgcc
    30481 ggctgcagat cgtcgatgac caccgccggc tcgcccactt cgcgcagctt cttcgccagc
    30541 tcggtatggc ggcgcaggct gttgcccagg aacagcgagc cctgcaggct cagcacgccc
    30601 tctacgccgg tggtgcggtt gaacaggaac tggtgcggcg cggccaggcc cgcctgggtg
    30661 gtggtgttgg tcggcgcggc gaagacctgc ttgccaaggc ccagcgcctc gatcaccgca
    30721 atgacatcgt cgccaccggc gataatgcgg ctggtgtcgg ccacctcgat atcggcgccg
    30781 tcatcggaat gcaccttggc cggcagcacc gccttctggt cgtgcacggc cggcatctcg
    30841 gcaccggcca cgcgctgcca gcctgctggc aaggcacctt cagccgccgc cgtggcggcc
    30901 ggcgcctcgg caggcttctg gccctcggac ggggccggcg cgccaccgca ggcggacagc
    30961 gccagcgaaa cagccagggg aagcgcacac aggcgcagac gggacgcgat gttcatggag
    31021 gttctccttg ctggccgggc ggcacacgcg ccgcccggcc cggtggctta ctgcttcggg
    31081 gtgatgcggg tgatgcggtc acccttcggg tcttcggcgc cgcgcgactt gttcaccgcg
    31141 aacacattgc ccttgccatc ggcgcggacg tgattcggca gcgtgccgcc atcaaggttg
    31201 gcgaccacct tgccatcgcc gttgaccacg gtgacggtac cggcgccgcg gttgctgaca
    31261 taggccaggc cggaggcatc atcgaaggcg acgttcagtg caccggcacc aaccggcacg
    31321 tcgtgcagca ccttgccggc ggccacatcg acgatcagca ggttgtcggt gccctgcgag
    31381 gccacgtaca ggcgattacg cgccgcatcg aaggcgacgc cggaggcgct gatcgaattg
    31441 cccaggtcga tgaccttgtc gaccttgccg ctggccacgt cgatcaccgc cgcttccggc
    31501 gtaccgatgc tgacggtgaa cagcttgccg cccttctcgt ccagcaccag gctcatcggg
    31561 gtgaacttgc cgtcatcgac gccggactcc agcgtcaccg ccggcaattc cttgaaggtc
    31621 ttggcgtcga acaccgacag gtggtcctca cccgtagccg aggcgaacac cttgccgtgg
    31681 gtaccatcga ccaccacgtc gcgcgcgtgc ggcacggcat cgaccgggaa ctggtggacc
    31741 agtgacagat ccttctggcg atagaccgcg atcgagttct ggcgggtatt ggtgacccag
    31801 acgttgccgt tggtgtcatc cacgccgacg ccgtagaccg catacaccgc gccattggtg
    31861 ctgcccggca cctgcgccgg ggtgatcgcc ttggtcacct tcagcgtctt cgggtccagc
    31921 ttcagcagct gcgactgggt caccggcggg cggcccaccg ccgaggtcac gaacaccgcg
    31981 ttgctggcgg cgctgtaggc ggactggtac aggcccggca ccagcttgtt ggactgggtg
    32041 gcgaactgcg cctggcccga cagcggcagc tgcggcgaga cccgcagctt cagcaccgtg
    32101 gctgcggccg gctggctggc acgcaccacc accgggtggg tgcccggcac cgcatcggtc
    32161 ggaatgctca gctgggtctt gaagttgcca tcggcatcga ccaccagcgg ctgcgcgttg
    32221 agcacgctgt cgccacgcag caggctgacc ttctggcccg gtacgaaacc gcgaccgacc
    32281 acgtcggcgg tactgccggg aaccacgttc tcaccgcgtg agacgacctg gcccttgaag
    32341 gtggcattgg ccggctggtc gaataccggc tgcgcggtgg cggtcaccgc cagcagcagg
    32401 ccggcggcca gggaggtgag acggaaagac ggacggaacg acatggaagg ctccttgcac
    32461 acgtaggccg cgccacgtgg cgcgggagtc atcggttgcc tgggccgctg cacgtcggca
    32521 gcctcgcctg ggtagtgggg tcgcacggca tcgcgtgcga gggaattcat tcggcggcgt
    32581 tgtcaccgcc aggggcagca ccgtcgccgg cgctgcgatc ggtcacgcca tacaactcgt
    32641 gcagcgcggc gtggaacgag gccggcagca tcggaccgtg gccgaggccg tcgaactcgc
    32701 ggtagtgcac gctcagaccg ggcaccttgc ccagccgctc ggacagctgc atcgctgcgt
    32761 ccggggtggc accaccgatg cggcgcaggt gcgcgaccac gcgcgggttg ttcatgtcgc
    32821 gcttgccgcg gtcgccgacg cgctccgcgc cgcccagcat caaccagagc tttgcgtgct
    32881 ggccgtgcac gttctgcacg aactgctgtt ccggatcgcc cagcgccgca ccctggctcc
    32941 accacagcga cgggctggcc gccaggtagg actggaacgc cgccggacgg gtgtacagcg
    33001 cattgagcac gaacaggcca cccagcgagt ggccccacag cgcttgctgc tgcgcatcga
    33061 tgcgtgcgcg gcgctcgacc tcaggcttga tccgccgctc gatcacatca aggaacgctg
    33121 cagcgcctcc tcctgccgcc tgggtcgtgc cgctctcgtc gtccgcgcga tcgatccacg
    33181 cggtgtagtc gcgggtgcgc gccttcgaat cgatgcgcag gtcgttgtcg tagccgatca
    33241 gcaccagcac cggtggtgcc ttgcgtgccg ccaactcggc cagaatcggc tggtccagca
    33301 ccatggccac ggcattgccg tccagcgcgt acaacaccgg cagcggcgcc ttgccagcct
    33361 ttgccggaat cgccacgttc acccgccagc ggcgttgctg gtcggggctg tccaccacga
    33421 aatgctcgaa gcgatagctg gccgccggct cgtcgagcac ggtgtggccg attttctgca
    33481 gcgggttgcg ctgctgcgca tgggcgtacg gagtagccag gagcagaccc atcatcaagg
    33541 cggccaggcc gcgggccagc gggccccggc gcgaaggcag gacgaaatgc ttcatcagcg
    33601 gcggcagaag cggcccacgg ccgccggttc acaagggacc gcagtctacc tcaaacgcga
    33661 atgattatca catcgatcac acgtcacact gtgtatcacg cgcgcgcatg cccgcttgca
    33721 cagggggtgg aatttcccct attttgccgg ccaccggggc attggatcgc cccgcttcca
    33781 acgctgccat ggagggcggg cagtctatcg ccgtccgtgc cgcgttcatc cgcgccacga
    33841 ccgccatggg atcggatccc atgattgtga gaccccttga agcaaaccgc actgatcgcc
    33901 ctcaccctcg gcctgctcgc gccgctggcc gcccacgccg cacaggatct tccgacgctc
    33961 taccaggcct ttgaagaagc cggcaattcc acgctgagca tggaagaact caaccagacg
    34021 gtgaccttca ccgccgtggc gctgggcgtt tccagcaaca tggcgggcga gccgctcatc
    34081 gaggccggcg atgaccaggg caatgtcctg gcccggctga ccacctccga tgatcagcag
    34141 gccgccaaac tgggcgcact ggaagaaggc gctgtcttca gcgccagctg cacgctgcag
    34201 ttcagctccg gcacggacta cctgtctttc ggcgattgca ccatcaagta acgacgaagc
    34261 cggcgaaagg ccggcttctt ttctttgcct ctgtagcgtc gagccatgct cgactcgtgc
    34321 agcatcacgg ccccgtgggc accgagccat acggattttc ctgcggcgta cccggcagca
    34381 gcgagaagat catgatcacg atgccacctc ccggcaccag cgccagcagg aacagccagc
    34441 ccgactggtt gcagtcatgc aggcggcgca cggtcacggc aatcaacggc acgatcgtgg
    34501 ccagccacat cacgcccaga agcaccacca tgccgatcag gacgccggcc agtgcatcgg
    34561 cactgttgcg cagaaggatc gccagcacgc cggccagcag catcaccgcc gttgcgagca
    34621 gaaacaggaa cagctggtac atccagtact cgcggcggtt ggcgcggccc tcgaactggg
    34681 cgtagcgctt caacggcaga atcatttcct gcacggcatc gatccttgaa aagagaagcc
    34741 gcgcagtgtg ccaaatgcac gcacacacga caatgcagcg tcgggccctg ccc
//
LOCUS       DAOKIP010000022        34183 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.022,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000022 DAOKIP010000000
VERSION     DAOKIP010000022.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 34183)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 34183)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..34183
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.022"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            241..1698
                     /gene="guaB"
                     /locus_tag="QEL58_000962"
     CDS             241..1698
                     /gene="guaB"
                     /locus_tag="QEL58_000962"
                     /EC_number="1.1.1.205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002805758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IMP dehydrogenase"
                     /protein_id="HDS1675464.1"
                     /translation="MLRIQAEALTYDDVSLVPAHSTILPKDVNLETRLTRDLKLKLPI
                     LSAAMDTVTEARLAIAMAQLGGMGIIHKNLSLEQQAAEVAKVKKFEAGVIRDPITVGP
                     ETTIRDVLALTQAHNISGVPVVGSDGLLAGIVTHRDMRFETELDDPVRHIMTKKDRLI
                     TVKEGAASDEVLQLLHRNRIEKVLVVNDSFELRGLITVKDIQKNTDFPNAAKDLSTRL
                     LVGAAVGVGGDTDRRVEALVAAGVDVIVVDTAHGHSQGVLDRVSWVKKNFPNVQVIGG
                     NICTGEAALALLDSGADAVKVGIGPGSICTTRVVAGVGVPQVTAIDLVAEALQDRIPL
                     IADGGIRYSGDIGKALAAGASTIMVGGLLAGTEESPGETELYQGRSYKSYRGMGSLAA
                     MEKGSKDRYFQDAATADKLVPEGIEGRVPYRGPVGGIIHQLMGGLRATMGYVGCATIE
                     DMRSKPKFVKISGAGQRESHVHDVTITKEPPNYRA"
     gene            1803..3368
                     /gene="guaA"
                     /locus_tag="QEL58_000963"
     CDS             1803..3368
                     /gene="guaA"
                     /locus_tag="QEL58_000963"
                     /EC_number="6.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing GMP synthase"
                     /protein_id="HDS1675465.1"
                     /translation="MTNIHNDKILILDFGAQYTQLIARRIRELGVYCEIWAWDHNPAE
                     IAAFGAKGIILSGGPESTTLPGAPAAPQEVFDSGLPIFGICYGMQTLAAQLGGATEAA
                     DQREFGHAEVNVINPDALFKGLSDHGGEPKLNVWMSHGDHVSVAPPGFTITATTDRIP
                     VAAMANEEKRWYGVQFHPEVTHTLQGQALLRRFVVDVCGCQTLWTAANIIDDQIARVR
                     EQVGDDEVILGLSGGVDSSVVAALLHKAIGEKLTCVFVDTGLLRWQEGDQVMAMFAEH
                     MGVKVVRVNAADRYFAALEGVSDPEAKRKIIGNLFVEIFDEESNKLKNAKWLAQGTIY
                     PDVIESAGSKTGKAHVIKSHHNVGGLPEHMKLGLVEPLRELFKDEVRRLGVELGLPRT
                     MVYRHPFPGPGLGVRILGEVKREYAELLAKADAIFIDELRKADLYDKTSQAFAVFLPV
                     KSVGVVGDARAYEWVIALRAVETIDFMTAHWAHLPYEFLGTVSNRIINELRGVSRVVY
                     DISGKPPATIEWE"
     gene            3664..6054
                     /locus_tag="QEL58_000964"
     CDS             3664..6054
                     /locus_tag="QEL58_000964"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005920538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase family protein"
                     /protein_id="HDS1675466.1"
                     /translation="MNKQALSERDICTKFITPALEGAGWDVLTQVREEFLLTKGRIIV
                     RGKLHTRGQHKRADYVLFHKPNLPIAVIEAKDNKHTVGSGMQQALGYAEMLQVPFVFS
                     SNGDGFLFHNKIAKDGVIERELSLDEFPSAGTLWQWWAEHQGLSTQQQALVAQDYYSD
                     GSNKTPRYYQLLAINKTIEAIAKEQKRILLVMATGTGKTYTAFQIIWRLWKSRAKKRI
                     LFLADRNILVDQTMTNDFKPFGAAMTKIQKRQANKSYEIYLSLYQAVTGNEEEQNIYK
                     QFSPEFFDLIVIDECHRGSAAEDSAWREILTYFHSATQIGLTATPKETKDVSNIDYFG
                     EPIYTYSLRQGIDDGFLAPYKVVRIDLDKDLTGWRPDKGMLDKHGNEIEDRIYNQRDF
                     DKTLVLEQRTHVVARKISEYLKASNRFDKTIVFCDNIDHAERMRQALVNENADLVAEN
                     HRYVVRITGDNEEGKMELDNFIFPESKYPVIATTSKLMTTGVDAQTCKLIVLDQRIQS
                     MTEFKQIIGRGTRINEDFDKYWFTILDFKKATELFADPAFDGDPVQIYEPSPGEPPLP
                     PDEEDGEASPGDEFAYPTPDDNPTFPGGVVEPLPGEEGSNVRRYVVANVEVKVVAERV
                     QYFDANGKLITESLKDYTRNTLAKDFASLDDFLRHWSKAEKKQAIIDELAHQGIFFEA
                     LADEVDKHSGKDFDPFDLLCHVAWDQPPLTRKERAEQVKKRHYFAKYGEQAQMVLEAL
                     LDKYADEGVAAIEETQILSIAPFSRMGTPIELVRAFGGKTQYQQAVGELEHELYRA"
     gene            6080..7558
                     /locus_tag="QEL58_000965"
     CDS             6080..7558
                     /locus_tag="QEL58_000965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003487961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent DNA methyltransferase"
                     /protein_id="HDS1675467.1"
                     /translation="MSVATLIKAIQDIMRKDVGVDGDAQRISQICWLLFLKIFDDKEQ
                     EWELTQSSYRSPLQSRFRWSNWAKDPEGMTGEELIDFVNNDLFPSLKQLATKAGVSAQ
                     GRVVGSVFEDAYNYMKSGTLLRQVINTIEEDVDFNSSSDRHLFNDIYEKILADLQSAG
                     NAGEYYTPRAVTQFMVDVLDPKLGESILDPACGTGGFLTCAIEHLKKQVKTPDDNRLL
                     QENIHGVEKKPLPHMLALTNMMLHGIDVPTRIRHDNTLSRPFKDYGPRDRVDIIITNP
                     PFGGMEEDGIEKNFLAKHQTRETADLFMALIMHLLRHDTGRAAVVLPDGFLFGEGVKT
                     TLKRELLEEFNLHTVVRLPKGVFAPYTSIATNILFFEKGGPTKDVWFFEHPYPAGYKS
                     YSRSKPLTIEEFDLEKTWWGGPQRKGRKATEHAWKVSAKDLAARNYTLDCKNPYEVVV
                     ELGDLDELMAEYQDITRQLQAAQQALKAELLAALEATSMEAK"
     gene            7555..7716
                     /locus_tag="QEL58_000966"
     CDS             7555..7716
                     /locus_tag="QEL58_000966"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675468.1"
                     /translation="MSAELVSLVAAPEGYVNLLGELKNCIYTAQQWVALAVNRELVLQ
                     VEREPGERA"
     gene            7713..10088
                     /locus_tag="QEL58_000967"
     CDS             7713..10088
                     /locus_tag="QEL58_000967"
                     /inference="COORDINATES: protein motif:HMM:NF013579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HDS1675469.1"
                     /translation="MNMHTAQLLEKHFDTAFAAPDGIKKLRELILTLAMQGRLVPQDP
                     SDQPTSELLREIDVEKQRLIKKGAIKKTKSLPSIKEEEKPYSLPQGWDWARLQSFSDY
                     NGRPNIDPSEIAEDTWLLDLEDIEKETSRLICRARYSQRESKSTKSTFKEGDVLYGKL
                     RPYLDKVLVADSAGVCTTEIVPIVPSKAVIPEFLRWLLKRPDFLSHVNTLMYGVKMPR
                     LGTEDAIHSVHPIPPVNEQYRIVAKINELMVRCDGLEKLRTAQQGGRVKVHAAAIKQL
                     LNIAEPDQYQRAQAFLAEHFGELYTVKENVTELRKAVLQLAVMGKLVPQNPNDQPASG
                     LLKDIEADKQRLISEGQIKIPKPLPPVTKEEKPYALPQGWEWVRLGELAEFINGDRGK
                     NYPNREEYVSEGIPWINTGHIDPDGSLTCRDMNFITKHKFDSLNGGKIRLGDLVYCLR
                     GATFGKTAIVDPYGEGAIASSLMIIRPYVRVFNRYMYHYLVGPVGRGQIFRFDNGSAQ
                     PNLSSNSVRYYVYPLPPLSEQKRIVARIDALKNLCDSLDQKIEEATRKRTNLLSALMS
                     AQSKGGAVDDAQRSSRSTAQFIDLATYRASIGCYAFNKLANAQYFGRTAAAKVMYLAQ
                     AHIGLDLDLKPERKAAGPLDKWIYDFERQGQGESWFEVNERTLTNGRKKTEYRCLSGL
                     SEPAAKAEALMLPGQKAEFDRLIYVLADKKTEEVEILATLFAVWNDFLIDGVRPTDAQ
                     IISDVRENWHESKARFTAAELGRWLDWLRRENITPRGLPPRTVQQSRLGFD"
     gene            10178..13216
                     /locus_tag="QEL58_000968"
     CDS             10178..13216
                     /locus_tag="QEL58_000968"
                     /inference="COORDINATES: protein motif:HMM:NF012307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675470.1"
                     /translation="MTNLQDLGLAYRKAKVDLYYSSHASLDDIASYEENLHSNLSLLQ
                     EKINGEDEAWVTSPEFIGTWTLVTKSVEMDCWAKYKKENSSGLVFSSPIDEWQHALKA
                     LAEKEVPEKPKAEFRIMARCSLDFHVLSTLWMLEVGQLFDARLSECAYGNRLRRTQDG
                     KGINKLSLGSFQPYLKPFRDWRDKGIAAMRAALDADKKIVALTADVSSFYHELNPGFM
                     LNPSFRKEILGIKLNKRKKKLHRLFIHALQAWAAATPLKKGLPVGLPASAIVANMALV
                     ELDRCIEHQVAPIYYGRYVDDILLVMENGAGFDSTLDLWEWLFGRSNEMLGWVGQSKK
                     QVRFRPAYLSRGRGKSRVRFANGKNKVFILAGEPGKTLVDAIAHQIYERASEWRAMPR
                     LPRSATHVGTDLLAATQSDGEAADNLRNADALTMRRAGFAIKLRDFEAYERDLLPEAW
                     TAHRRAFFRAFTQHVLVLPQFFDLAVYLPRVIRLATACEDFSDLRRIIEALQRLCQQV
                     QEQCDISVKAWPEKKSKPNATEMLDRWKGQLFSSVRESITAAFPPRLSKAGKQAWKTY
                     MADCHSVIDLDAFLSWPLSVKSFQAQQARLFSLDLAHLPFRFIGLPKEMVAQRGIPAK
                     KTIVGCDKAAELLSGAVFKGAQTLTQWIGFKHLPQGLPFATRPFNLPELFIINRHAYL
                     ETTQDDMQAVVLSVRGFELGEKTPLFDKNNVLQIPDGVTPRKCSIAVSSWQTSLDSWT
                     ASVMCMPDPDAERYVRLCRLLDGVIAQPRDSRYLILPELALPAHWFIRIARKLQGRGI
                     SLITGIEYLHASKSRVRNQVWAALSHDGLGFPSLMIYRQDKQRPALHEEQELQRLAGL
                     EMKPDKAWKTPPIIQHGDLRFTMLICSELTNIRYRADLRGKVDVLFVPEWNPDTETFN
                     ALVESAALDIHAYIIQCNDRQYGDSRIRAPYKDSWKRDVLRVKGGVTDYCVIGEIDVQ
                     ALRQFQSSHRSPAKPFKPVPDGFNDAMDHQRKILPVGNDE"
     gene            complement(13406..13762)
                     /locus_tag="QEL58_000969"
     CDS             complement(13406..13762)
                     /locus_tag="QEL58_000969"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675471.1"
                     /translation="MKKSDTFSSYTVVEPINDDTPLPDLNSLLGILTRIRAGEGADGL
                     PWPENDVSPGRRVSLAKSERAMVGALTVLEVLHAADRCRVAAEPEKHLDEGVVDGLFL
                     ACRGLVEWACREVRPE"
     gene            complement(14317..15240)
                     /locus_tag="QEL58_000970"
     CDS             complement(14317..15240)
                     /locus_tag="QEL58_000970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005416257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDS1675472.1"
                     /translation="MSRKFDYLGDVEVFLAVVEHGSFTAGAVALSTTPSVLSRAVTRL
                     EERLGRQLLQRTTRRVGLTDAGRLYLEQVRTAFGLLDDAERDVLAQDGALAGRVRLSV
                     PTTYGHYRLPPVLARFAQQYPQVQVELNITNRNVDLVAEGFDLAIRLGQLPDSGLVGR
                     KLEDAPLVLVASPEYLQLHGTPQTLEDLQQHLCLPFVMPRTGRLAPWIFRDDGRDVDW
                     LPRSSIETSDDVLGVVSLAEQGIGICQSYAFIVRERLQRGQLVEVLPQLRGRSRPFSV
                     IYAPHRRQSAAARAMIELLVGNAAVIEDGVG"
     gene            15337..16176
                     /locus_tag="QEL58_000971"
     CDS             15337..16176
                     /locus_tag="QEL58_000971"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 glutamine amidotransferase
                     domain-containing protein"
                     /protein_id="HDS1675473.1"
                     /translation="MNLMTRLAAALALTLAASGAHAANVLVVLSDENHLDLKDGKVLS
                     TGFYLNELMQPVKLLLDAGHEVTFATPQGRAPTVDASSVTPAYFGNDAAQLTLHKDLL
                     EKLALTSPTASPVVSLARIEQQGYARFDAVYIPGGHAPMQDLLKSPALGRLLADLHQR
                     NKTTALVCHGPIALLSTLPDAGGFVAKLEAGAMPVTPKWIYSGYQMTVISNQEEEQAK
                     PLLGGGEMKFYPQTALQRAGATFSSNATPWTGHVVVDRELITGQNPASALEVGQRLVE
                     RLK"
     gene            complement(16255..16899)
                     /gene="hxsA"
                     /locus_tag="QEL58_000972"
     CDS             complement(16255..16899)
                     /gene="hxsA"
                     /locus_tag="QEL58_000972"
                     /inference="COORDINATES: protein motif:HMM:TIGR03979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="His-Xaa-Ser repeat protein HxsA"
                     /protein_id="HDS1675474.1"
                     /translation="MSNALMIVSAATLGALGTEPPKGQSDLSRLSEMDGKYATVLSTS
                     LNAGRHNLYAGHRSHSSHRSHSSHRSHSSGSGSSYRSYSPPPATYTPPPSTYTAPASS
                     RSSGGSGSGTGTYQGQSLQPASRTKAATTNNLTVDHGSSAKPISEGRDADALKLLIMR
                     VQAALYSKGYDPGAIDGTLTPETQSALRMFQLAHGIRATGTMTTPTLDALGVRL"
     gene            complement(16902..18071)
                     /gene="hxsC"
                     /locus_tag="QEL58_000973"
     CDS             complement(16902..18071)
                     /gene="hxsC"
                     /locus_tag="QEL58_000973"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019338243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="His-Xaa-Ser system radical SAM maturase HxsC"
                     /protein_id="HDS1675475.1"
                     /translation="MLPLETKAVLSPSAKASLLKMVDLGDFPQASLPLQRMALDVREV
                     APEQLSDALLRLPWGAVLTPQGFDVPDDVPHVRLDGPSALCKSGDVVELNPLQRKVAI
                     RYRRGDTGNVLFATERCNSYCLMCSQPPREVEDDWRVHHLLDLIDLIDVAEPSLAISG
                     GEPTLLGSGLVDIVRKCAEKLPNTHIHILSNGRLRDPELHSRFADLHPNLSWGVPLYG
                     DHYALHDYVVQSEGAFSQTLRGLYALDAARQRVEIRVVLVRPTVERLVQLARYIWRNL
                     PFVEHVALMGIEPIGFAKAHQADLWADPIDYAHTLTEAVETLAEAGIPVSLYNLPLCA
                     LDRSLWPYAVQSISPWKNDYLPACDACAVRSRCGGFFSWITPAWTSRAISPVLEI"
     gene            complement(18058..19554)
                     /gene="hxsB"
                     /locus_tag="QEL58_000974"
     CDS             complement(18058..19554)
                     /gene="hxsB"
                     /locus_tag="QEL58_000974"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="His-Xaa-Ser system radical SAM maturase HxsB"
                     /protein_id="HDS1675476.1"
                     /translation="MSKFRHPEAFAASQAYQLLPFRFRRLPWDPDRAFVSSMAGDWLL
                     MHMHDLQRFAAHELPTNSALFADLEARHLAVAGTERSSLSPLLSQIRSRKSYILGGPA
                     LHIFVVSLRCHHTCSYCQVSRQETTATAFDMASSHAEQAVERLFEWPSRELTIEFQGG
                     EPLLNFEQVIAITRRIVERNRSAGRNLRFVLASTLHDLTEAQLAFLAEHRFKLSTSLD
                     GPESLHNANRPRPGRDSYRRTVEGIELGRRWLGDDGVSALTTLTRRSLEVPEAIIDEY
                     QKLGFHSISLRPLSPYGFANRTAHRTGYSTADFLAFYRRAFAHLMVVNRSGYAMEESY
                     ASLLLSQLFTSFGHGYVDLRSPSGAGLGAVIYDHDGRVYPSDEARMLAAMGDDTFALG
                     DVSQPVAHWLGSPAMTRLLEAGVAEALPTCADCAFVPLCGADPIEHYARQGDPIGHRP
                     SSDFCARNMGLFDFLLERYEREDLVGRRMMRSWAVPKANTEDLIDAAA"
     gene            complement(19554..19850)
                     /locus_tag="QEL58_000975"
     CDS             complement(19554..19850)
                     /locus_tag="QEL58_000975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005416075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675477.1"
                     /translation="MERSHYIVDRQLFSDDMVARAAHRYTGKFGVELLNQGADLAVVF
                     STTDGSPLPVDLSTRFSRDLLDERIRASVRAETHGLQLELIRAALHQAQPSTAA"
     gene            20082..20864
                     /locus_tag="QEL58_000976"
     CDS             20082..20864
                     /locus_tag="QEL58_000976"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010484625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxybutyrate dehydrogenase"
                     /protein_id="HDS1675478.1"
                     /translation="MFSGKVAVVTGSTSGIGLGIATALARQGANIVLNGFGDAAEIES
                     IRSQLETEFGVRVAHDGADLSRGEAVRGMIEHAVATMGRIDILVNNAGIQHTASIEEF
                     PAEKWDAILALNLSAVFHATAAALPYMKQQGAGRIINIASVHGLVGSVNKSAYVAAKH
                     GVVGFTKVTALENAGTGVTANAICPGWVRTALVEQQITALAKKEGTDQESAARALLAE
                     KQPSLQFVTPEQLGEMVVFLASDAAAQITGTALPVDGGWTAR"
     gene            complement(20861..21625)
                     /locus_tag="QEL58_000977"
     CDS             complement(20861..21625)
                     /locus_tag="QEL58_000977"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675479.1"
                     /translation="MSASEADSLHSKVAAVTLGFWVMKITATTLGETAGDLLSMTLNL
                     GYVASSAILLTVFAGLLAVQLSARRFHPVLFWSVVLATSTAGTTMSDLLDRTLGLGYA
                     TGASLLAGCLALVLLAWRVSEKSISVSNIASRRAEGFYWTAVLFSNTLGTALGDFLAD
                     DSGLGFTGGALLIGSLIALTALATRIKGINRVILFWIAFVLTRPFGATFGDLLTKPLE
                     KGGLGFGTVGSSLVLFTILATLVALPMLQRRAQPAN"
     gene            21809..22195
                     /locus_tag="QEL58_000978"
     CDS             21809..22195
                     /locus_tag="QEL58_000978"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675480.1"
                     /translation="MGLLVLSASAGSASAQPRDATYSSVCRHADSGDLLGLEVSFVSE
                     ADGGYALVQRYEGAAIAPVLMQVKQRGRDLVLVSGATDSIALRQDGKILRLTYLDGQL
                     SAAGSSSETLIPSLPVWQGKSVAACR"
     gene            22497..22910
                     /locus_tag="QEL58_000979"
     CDS             22497..22910
                     /locus_tag="QEL58_000979"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009610413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAAR domain-containing protein"
                     /protein_id="HDS1675481.1"
                     /translation="MGRLIVVVGDRTSGGGRVITGAPFTDIHGSAVARISDKATCPKH
                     QGIFSIVTGDSTWRVDGQPVARDGDRLECGCSLMAGTQLTVDISSGGAPASEQSVAPV
                     AERSPWGAASTMPSKPICEACLRAAADRGTAFLRR"
     gene            22913..23365
                     /locus_tag="QEL58_000980"
     CDS             22913..23365
                     /locus_tag="QEL58_000980"
                     /inference="COORDINATES: protein motif:HMM:NF024894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4123 domain-containing protein"
                     /protein_id="HDS1675482.1"
                     /translation="MNYAIVDAARCANSAAVLHGYAAEGRARALFAGQPESPHADAGP
                     WLVILSEDPVLHQWLFNLEPIPGAVCRFSSTVNVDAVVVHLQARMALQLTDGGMALFR
                     LWDGRALYRMWGVMTQAQKAAFIAPFSRWSVQLQGRRWELDHMAVEKP"
     gene            23365..23724
                     /locus_tag="QEL58_000981"
     CDS             23365..23724
                     /locus_tag="QEL58_000981"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011260740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675483.1"
                     /translation="MLKLVARQEALLRLPDPFSFLPRLAAEIRRDLPERVMGLDDAAL
                     LAETDRCYTYAAYELGVTHLETLVAWTKVDVGSGGELHRNAEVDIAVRHADNPNIQAA
                     DLLGALVALHRWPKDDV"
     gene            23724..24431
                     /locus_tag="QEL58_000982"
     CDS             23724..24431
                     /locus_tag="QEL58_000982"
                     /inference="COORDINATES: protein motif:HMM:NF026984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675484.1"
                     /translation="MAAIPIRWGLGKLAERAAAAAAAAAAAADAAKDVVKGKPDVRAR
                     DVECADAQDASDCNECRLGDGRVGQPPTPRYITRRTRINYDYQLQIANMYAGPERFGY
                     VKRGDNADEIVNLDLESFKSLFGRGGEFTTLEWLFAGISFDGFWRSRCTVLEAKGNFG
                     SFFNADGSLSKPFARAMTDQWLQSFTKQAMAVRATGPQGKLEWHFMDVAASKAGLMVG
                     IPPASVRVTPLVIGRMP"
     gene            24428..25162
                     /locus_tag="QEL58_000983"
     CDS             24428..25162
                     /locus_tag="QEL58_000983"
                     /inference="COORDINATES: protein motif:HMM:NF026917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="immunity 52 family protein"
                     /protein_id="HDS1675485.1"
                     /translation="MNITIACHFPAAARTPFQVWEDVVGITSSLSNADPLFANWWAAP
                     RLSSDAYVPVGEGDDLVARVQEDDIKLAKEYPGQPSIGSNGALLTNAGNDKDWLRRGG
                     VGLSYMPALGMLRLHVDRIEKVFDSPVSVLESTLSVLLNSLPITFAKTNVQQLVEGEL
                     LLYSVDRAPFPHREFLGWMGYVDASLTQDQVPAAARLERRGGGTLILATEVLDLADAH
                     AIKQANQVEMSLVDLGLLPVTDPLLG"
     gene            complement(25186..25644)
                     /locus_tag="QEL58_000984"
     CDS             complement(25186..25644)
                     /locus_tag="QEL58_000984"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014036928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HDS1675486.1"
                     /translation="MSAESTRFIHVIYIASTPQKVFEAITRPEIASRYWGHENVSDWK
                     PGSRWQHVRANETRSVELVGEVVESTPPSRLVITWAAASQAESPDAYSRVTFEIVPYQ
                     DMVRLTVTHDELEPGSGMDTGIRQGWPIVLSSLKSWLETGKGLDVFAKPS"
     gene            complement(25647..25961)
                     /locus_tag="QEL58_000985"
     CDS             complement(25647..25961)
                     /locus_tag="QEL58_000985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019337518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDS1675487.1"
                     /translation="MNADKVFKALADPTRRTLLDLLCEDNGQTLGQLCEHMDMARQSV
                     TQHLGLLEDANLISTVRRGREKLHFINPVPLHEVYERWVRKFEQQRLSLLHDLKRELE
                     GE"
     gene            complement(25973..26428)
                     /locus_tag="QEL58_000986"
     CDS             complement(25973..26428)
                     /locus_tag="QEL58_000986"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014646884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC domain-containing protein"
                     /protein_id="HDS1675488.1"
                     /translation="MVDIAHRVGIKAPASQVYQALATPEGVAAWWAEDTHGDRDVGGT
                     VKVRFTNNGQEIGAMEMKLEQLIPGQLVLWEFLAGPAEWIGTHARFALKQEDDYCIVL
                     FTHEGWKERVEFTSHCSTKWAVFLLSLKALLETGTGQPNPHDVRIDNWN"
     gene            26644..28413
                     /locus_tag="QEL58_000987"
     CDS             26644..28413
                     /locus_tag="QEL58_000987"
                     /EC_number="4.2.1.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014036932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oleate hydratase"
                     /protein_id="HDS1675489.1"
                     /translation="MYYSSGNYEAFARPRKPAGVEGKRAWFVGSGLASLAGAAFLIRD
                     GRMAGERITILEQQQIAGGALDGLKVPEKGFVIRGGREMEDHFECLWDLFRSIPSLEI
                     DDASVLDEFYWLNKDDPNYSLQRATINRGEDAHTDGLFTLSEQAQKDVIALFLATRQE
                     MENKRIDEVLGRDFLDSNFWLYWRTMFAFEEWHSALEMKLYLHRFIHHIGGLPDFSAL
                     KFTKYNQYESLVLPLVKWLQDHGVVFQYGTEVTDVDFDLQAGRKQATRLHWTRDGVAG
                     GVDLGADDLVFMTIGSLTENSDNGDHHTAARLNEGPAPAWDLWRRIAAKDAVFGRPDV
                     FGAHIPETKWESATVTTLDARIPAYIQKIAKRDPFSGKVVTGGIVSVRDSRWLMSWTV
                     NRQPHFKNQPKDQIVVWVYSLFVDTPGDYVKKPMQDCSGEEITREWLYHLGVPLDEID
                     ELAATGAKTVPVMMPYVTAFFMPRQAGDRPDVVPEGAVNFAFIGQFAESKQRDCIFTT
                     EYSVRTPMEAVYTLLGIERGVPEVFNSTYDVRSLLAATGRLRDGKELDIPGPAFLRNL
                     LMNKLDKTQIGGLLREFKLVQED"
     gene            complement(28462..29301)
                     /locus_tag="QEL58_000988"
     CDS             complement(28462..29301)
                     /locus_tag="QEL58_000988"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008267604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase"
                     /protein_id="HDS1675490.1"
                     /translation="MTSSRLILITGVSSGFGRALAQQALQAGHRVVGTVRNGEARVAF
                     EALAPGRAFGRLLDVTDADAIDALVADIEENVGAIDALVNNAGYGHEGILEESTLAEL
                     RHQFEVNVFGPAAMIKAVLPHMRARRRGHILNITSMGGFITMPGIAWYCGSKFALEGI
                     SEVLGKEVAAFGIHVTAVAPGSFRTDWAGRSMARAPRSIEDYDALFDPIRSAREAKSG
                     HQLGDPLKAAQAMLQIIDSDAPPSHLLLGSDALQLVRAKLASMASTIDAWEQLSRSTD
                     GIA"
     gene            29410..30354
                     /locus_tag="QEL58_000989"
     CDS             29410..30354
                     /locus_tag="QEL58_000989"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014646890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HDS1675491.1"
                     /translation="MIDSQQAQMQARMVGLLQTLAVEEGYTLTPLPGVRLLRSNRPLA
                     RTPVLYDPGIVIVCQGVKRGYLGGQVYQYDAQHYLAVSVPVPFTMETEASEQAPLLAI
                     YLHLDLQLAADLMIELGEQAGVGQVPAQSMMSSPMQAPMQATVLRLLEALADPLEASV
                     LGPALVRELYFRVLTGAQGAAMREALAMRGRFGSIGKALRTIHAAYATALDVGQLAAE
                     AGMSVATFHDHFRAITGTSPMQYVKSTRLHQARLLMLRQRMTAEAASLAVGYASPSQF
                     NREFKRLFALPPAAEVARMRRSFAVPPGPAGAVYVSSH"
     gene            30459..31046
                     /locus_tag="QEL58_000990"
     CDS             30459..31046
                     /locus_tag="QEL58_000990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HDS1675492.1"
                     /translation="MKEPLSPKALEILTHARSLLEAGGYNGFSYADVSARVNISKASI
                     HHHFPSKADLVRTVVELYRAEAREGLALLDRQLDDPLQELNAYVDYWSACIAGGTSSF
                     CICAMLAAESPMIPAEIAEEVRGHFEDLSGWLALTLQKGAATGQLQLQGSAADEAKAF
                     MSAVHGAMLAARGFGDAGTFATLARLAIARVSTAR"
     gene            31141..31641
                     /locus_tag="QEL58_000991"
     CDS             31141..31641
                     /locus_tag="QEL58_000991"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675493.1"
                     /translation="MSHALSALGVIHTAVSLVPVLAGLYGFIRHRAIDPATRSGKAYL
                     VGLVLSVATSFTVSSTGGLNPGHAFGVIVLLAAFGGVLAGRLQFLGRARPYLSTFGLS
                     FSFLLSLVPGVNETLTRVPLSHPIAAAPLAPVILQTLLGCAVLFVLGFLAQCWGIHAR
                     AVRTRG"
     gene            complement(31660..32904)
                     /locus_tag="QEL58_000992"
     CDS             complement(31660..32904)
                     /locus_tag="QEL58_000992"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014036933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675494.1"
                     /translation="MNDSSYRTYRVGIGVSLVLAALIATLSLIAVATPNLGWGVVALA
                     TIALWVGLPLLLVLVLAWLRYMVRQRGRVPGRVHALMFVPTVAAMLIIPLWQSLQHTW
                     STVAGGSRDPIAERHINLSGQPLWLDTAPYASTGSGTGPDLPMQGDTPGHFVAFHRYP
                     NAQSDADRAFPYEEGRLKRSVDHYRYATPSGDRAVTDVPLVRQPYPDTTRFNTGWGRT
                     GTPELVHLYYHYSDHVEVAPTLARLSGSTADDLQRSRFEGLVLFTIHNYGSAPIVRME
                     ANGIALDIGDRAIENIPVAPADCTAYGYPAGVALLPLDLPLQVRWQTVDAPTQWHSAR
                     VQVPAFRQAQPLPGQSTLQRVLLYVLPDGMLAAERYAEVFDGDTRRGIKATGLPASAA
                     TFARCGSARAGYGDDADAVLSD"
     gene            complement(32984..33985)
                     /gene="ftrA"
                     /locus_tag="QEL58_000993"
     CDS             complement(32984..33985)
                     /gene="ftrA"
                     /locus_tag="QEL58_000993"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator FtrA"
                     /protein_id="HDS1675495.1"
                     /translation="MPTLPADPNAPLVAIVACHGQGLFEFGCAVGLFAPVRPELGVAW
                     YRTQLCAGEPGALRMLGNTQVQLPYDLGSVDDADIIVIPGWREPSERPPQALLDALIR
                     AHARGARIASICSGAFVLAWAGLLDGRQATTHWRLTEALARDFPRVDVREDVLYVDAG
                     SIITSAGSATGMDMMLHMVRKDYGARVANLVAERLVLAPWRDAGRSQRVSRAIPNGEP
                     SRLAKLMEWMRRNLREPHSLGSLAEQAALSQRTLQRQFLDATGLSPIDWLIRERVAFA
                     RELLETTDRPLQWIAEHAGFGSQESFRRHFRSQVDASPTEYRSQHRSGIGADRLVGC"
BASE COUNT         6757 a        10069 c        10979 g         6378 t
ORIGIN      
        1 aaggtggttg ccgaccgttg gtcggcacat ccatccgggt tatcggccca tctggggtcc
       61 agttgccgga cgggccgtgc caaccaaggt tggcacccac caaaggcggt atgccaccgg
      121 cggcccggat ggcctcctga accaatgatc gcccgcgcga cactgcgtcg catctacccc
      181 ctgccacgcg acgcgaaaac agggtaaaat gtcgcgcttc cccacatctc gggtatgccg
      241 atgctgcgca tccaggctga agcactcact tacgacgacg tctcgctcgt ccccgcccat
      301 tcgaccatcc tgcccaagga cgtcaacctc gaaacgcggt tgactcgcga cctgaagctc
      361 aagcttccga tcctgtccgc agccatggat accgtcaccg aagcgcgcct ggccatcgcc
      421 atggcccagc tcggcggcat gggcatcatc cacaagaatc tcagcctgga acagcaggcc
      481 gcggaagtgg ccaaggtcaa gaagttcgag gccggtgtca tccgcgaccc gatcaccgtc
      541 ggcccggaaa ccaccatccg cgacgtgctg gccctgaccc aggcgcacaa catctccggc
      601 gtgccggtgg tgggcagcga cggcctgctg gccggcatcg tgacccaccg cgatatgcgc
      661 ttcgagaccg agctggacga tccggtccgc cacatcatga ccaagaagga tcgcctgatc
      721 acggtcaagg aaggcgccgc gtctgacgaa gtgctgcagc tgctgcaccg caaccgcatc
      781 gaaaaggtgc tggtggtcaa tgattcgttc gaactgcgtg gcctgatcac cgtcaaggac
      841 atccagaaga acaccgactt cccgaacgct gccaaggatc tgtcgacccg cctgctggtc
      901 ggcgccgccg tcggcgtggg tggtgacacc gatcgccgcg tggaagcgct ggttgccgcc
      961 ggcgtggacg tgatcgtggt cgataccgcg cacggccact cgcagggcgt gctggaccgc
     1021 gtcagctggg tcaagaagaa cttcccgaac gtgcaggtca tcggtggcaa catctgcacc
     1081 ggcgaagccg cactcgcgct gctggacagc ggcgcggacg cagtgaaggt cggcatcggc
     1141 ccgggctcga tctgcaccac ccgcgtcgtc gccggtgtcg gcgtgccgca ggtcaccgcc
     1201 attgatctgg tggccgaggc cctgcaggac cgcatcccgt tgatcgccga cggtggcatc
     1261 cgctactcgg gcgacatcgg caaggcgctg gccgccggtg cctcgaccat catggtcggc
     1321 ggcctgctgg ccggtaccga ggaatcgccg ggcgagaccg agctgtacca ggggcgttcg
     1381 tacaagagct accgcggcat gggttcgctg gctgccatgg agaaggggtc gaaggaccgc
     1441 tacttccagg acgccgccac cgccgacaag ctggtgccgg aaggcatcga aggccgcgtg
     1501 ccgtaccgcg gcccggtggg cggcatcatc caccagctga tgggcggcct gcgcgccacc
     1561 atgggctacg tgggctgcgc caccatcgaa gacatgcgca gcaagcccaa gttcgtgaag
     1621 atcagcggcg ccggccagcg tgagagccac gtccacgacg tgacgatcac caaagagccg
     1681 ccgaactacc gcgcctgacg cgggccgggc aaagaggaac gaggaagctg attcccgttc
     1741 ctctttttcc atctgctgct gcaaatctga tttcgttttc cctactgcat tgccagggcg
     1801 ccatgaccaa catccataac gacaagatcc tgatcctcga tttcggcgcg cagtacacgc
     1861 agctgatcgc ccgccgcatc cgcgagctgg gcgtctactg cgagatctgg gcctgggacc
     1921 acaacccggc cgagatcgcc gcgttcggcg ccaagggcat catcctgtcc ggtggcccgg
     1981 aatcgaccac gctgccgggc gccccggccg caccgcagga agtgttcgac agcggcctgc
     2041 cgatcttcgg catctgctac ggcatgcaga ccctggccgc gcagctgggc ggtgccaccg
     2101 aagccgctga ccagcgcgag ttcggccacg ctgaagtgaa cgtgatcaac ccggatgcgc
     2161 tgttcaaggg cctgagcgac cacggcggcg agccgaagtt gaatgtctgg atgagccacg
     2221 gcgaccacgt ctccgttgcg ccgccgggct tcaccatcac cgccaccacc gaccgcattc
     2281 cggtggccgc catggccaac gaggaaaagc gctggtacgg cgtgcagttc cacccggaag
     2341 tgacccacac cctgcagggc caggcgctgc tgcgccgctt cgtggtggat gtgtgcggct
     2401 gccagaccct gtggactgcc gccaacatca tcgacgacca gatcgcccgc gtgcgcgaac
     2461 aggtgggcga tgacgaagtg atcctgggcc tgtccggagg cgttgattcg tccgtggtgg
     2521 ccgcgctgct gcacaaggcc atcggcgaga agctgacctg cgtgttcgtg gataccggcc
     2581 tgctgcgctg gcaggaaggc gaccaggtga tggcgatgtt tgccgagcac atgggcgtga
     2641 aggtggtgcg cgtgaatgcc gccgaccgtt acttcgccgc gctggaaggc gtgagcgacc
     2701 cggaagccaa gcgcaagatc atcggcaacc tgttcgttga gatcttcgac gaagaatcga
     2761 acaagctgaa gaacgccaag tggctggcgc agggcaccat ctacccggac gtgatcgagt
     2821 cggccggcag caagaccggc aaggcgcatg tgatcaagag ccaccataac gtgggcggcc
     2881 tgccggagca catgaagctg ggcctggtgg agccgctgcg cgagctgttc aaggacgaag
     2941 tgcgccgcct gggtgttgag ctgggcctgc cgcgcaccat ggtctatcgc catccgttcc
     3001 cgggcccggg cctgggcgtg cgtatcctgg gcgaagtgaa gcgcgaatac gccgagctgc
     3061 tggccaaggc cgatgccatc ttcattgatg agctgcgcaa ggcggacctg tacgacaaga
     3121 ccagccaggc gtttgccgtg ttcctgccgg tgaagtcggt gggcgtggtg ggtgacgcgc
     3181 gggcttatga gtgggtgatt gcgctgcggg ccgtggagac gatcgacttc atgaccgcgc
     3241 actgggcgca tctgccgtat gagttcctgg gtacggtgag caaccggatc atcaatgagt
     3301 tgcggggggt gtcgagggtt gtctatgaca tctcggggaa gccgccggcg actattgagt
     3361 gggagtgaac ttgcgggtgt gatgtagtcg gagaaggggc gctgcggcgc ctcttttctt
     3421 tgcagtggtg atatcttcgt gcccgcagaa tccataatat tgggcgggtg tcagactccg
     3481 aacaatctag ccggcctgaa gcttaatacc ttaagtttcc acccgagcgg gaagggggca
     3541 gagggtgctg cgcagttgac gtgaagcttg gcaggcgcat ggaatcggat ccgggttgcg
     3601 tgctgggcgg cgagcgatgg gtagaagcaa ccggtaatgc cgacatggaa ggagcaacat
     3661 cctatgaata agcaggcgct cagcgaacgt gacatctgca ccaagttcat cacgccagcg
     3721 ctagaagggg ctggttggga cgtcttgacc caggtgcgcg aagagttcct gctgaccaag
     3781 gggcgcatta tcgtgcgcgg caaactgcac acacgtggtc agcataagcg cgccgactac
     3841 gtgctgttcc acaagcccaa cctgcccatt gccgtaatcg aagcgaagga caacaagcat
     3901 accgtcggct cgggcatgca gcaggccctc ggctatgccg aaatgctgca agtgcctttc
     3961 gtattcagca gcaatggaga tggcttcctg ttccataaca agatcgccaa ggacggtgtg
     4021 atcgaacgcg aactgagcct ggacgagttc cctagtgccg ggacgctgtg gcagtggtgg
     4081 gcagaacatc agggtctgag cacgcagcaa caggccttgg tggcccagga ttactacagc
     4141 gacggcagca acaagacgcc tcgctattac caattgcttg ccatcaacaa gactattgag
     4201 gcgattgcaa aagagcagaa gcgcattctg ctggtgatgg ctacgggcac aggcaagacc
     4261 tataccgcct tccaaattat ctggcggttg tggaagtcgc gtgccaagaa acgcattctg
     4321 ttcctggccg accgcaatat tctggtcgat cagaccatga ccaacgactt caagccgttc
     4381 ggcgcagcga tgaccaagat ccagaagcgg caggccaata agtcgtatga gatctatctg
     4441 tcgctttacc aggccgtcac cggtaacgaa gaagaacaga acatctacaa gcagttcagt
     4501 ccggaattct tcgatctgat cgtgatcgac gaatgccacc gaggcagcgc cgccgaagat
     4561 tcggcctggc gcgagatcct gacgtatttc cattccgcca cacagatcgg cctgaccgct
     4621 acgcccaagg aaaccaagga cgtttccaac atcgactact tcggggagcc catctacacc
     4681 tactcgctac gccagggcat cgacgatggc tttctcgcac cctacaaggt agtgcgcatc
     4741 gacctggaca aagacctgac cggctggcgt cccgacaagg gcatgctcga caagcacggc
     4801 aacgagatcg aagaccgtat ctataaccag cgtgattttg acaagacgct ggtactggaa
     4861 cagcgcacgc acgtggtggc gcgcaagatc agcgaatacc tgaaagccag caaccgcttc
     4921 gacaagacca tcgtcttctg cgacaacatc gaccatgccg aacgcatgcg ccaggctctc
     4981 gtcaacgaaa acgccgacct ggtggcggag aaccatcgct atgtcgtacg catcaccggc
     5041 gacaatgagg aaggcaagat ggagttggat aacttcatct tcccggaaag caagtacccc
     5101 gttatcgcga ccacttccaa gctgatgacc accggcgtcg atgcccagac ctgcaagctc
     5161 atcgtgctgg atcagcgcat ccagtcgatg accgagttta agcagatcat cggccgcgga
     5221 acgcgtatca acgaagactt cgacaagtac tggttcacca tccttgattt caagaaggcg
     5281 accgagctgt ttgccgatcc ggctttcgac ggcgatcccg tgcagatcta tgagccaagc
     5341 ccaggcgagc cgccgcttcc tccagatgaa gaagatgggg aggcgtcgcc tggcgatgaa
     5401 ttcgcctatc ccacgccgga cgacaacccc acgttccccg gcggcgtagt cgaaccgctg
     5461 ccaggtgagg aaggcagcaa tgtacgccgt tacgttgtcg ccaacgtcga ggtcaaggtg
     5521 gtggccgagc gggtgcagta cttcgacgcc aatggcaaac tgatcaccga gtccctgaag
     5581 gactacaccc gcaataccct agccaaggac ttcgcgtcgc ttgacgattt cctgcgccat
     5641 tggagcaagg ccgagaagaa gcaggccatc atcgatgagc tggctcatca aggcatattc
     5701 ttcgaggctc tggccgacga ggtggacaag cattccggca aagatttcga ccctttcgat
     5761 ttgctatgcc atgtggcctg ggatcaaccc ccgctcacac gtaaggagcg ggccgaacag
     5821 gtcaagaagc gccattactt cgccaagtac ggcgagcagg cgcagatggt gctcgaagcc
     5881 ctgctcgaca agtatgccga cgaaggcgtg gccgccattg aggaaacgca aatcctctcc
     5941 atcgctccct tcagccgcat gggcacaccg atcgaactgg tgcgtgcctt tggcggcaag
     6001 acccaatacc aacaggccgt gggtgagctc gagcatgagc tctatcgcgc ctgaccagaa
     6061 ctagactcag gaagtattca tgtcagttgc aactcttatc aaagccattc aggacatcat
     6121 gcgcaaggat gtcggcgtgg atggcgatgc ccagcgtatc agccagatct gctggctgtt
     6181 gttcctgaag atcttcgacg acaaggaaca ggagtgggaa ctgacccagt ccagctaccg
     6241 ctcgccactg caaagccgct ttcgctggag caactgggcc aaggatccgg aaggcatgac
     6301 cggtgaagag ctgatcgact tcgtcaacaa tgacctcttt ccctccttga aacagcttgc
     6361 caccaaggcg ggcgtgtccg cgcaaggccg ggtggtcggc tcggtgttcg aggatgccta
     6421 caactacatg aagtccggca cgctgctgcg tcaggtgatc aacaccattg aagaggacgt
     6481 ggatttcaac tcgtccagcg accggcacct gttcaacgat atctacgaga agatcctcgc
     6541 cgacctgcag tccgccggca acgccggcga gtactacacc ccccgtgcgg tcacacagtt
     6601 catggtcgat gtcctcgacc cgaaactcgg cgagagcatc ctcgacccgg cctgtggcac
     6661 gggcggcttc ctgacctgcg ccatcgaaca cctcaagaag caggtcaaga cgccagatga
     6721 caaccggctg ctgcaagaga acatccatgg cgtcgagaag aagcccctgc cgcacatgct
     6781 ggctttgacc aacatgatgc tgcatggcat cgacgtacct acccgcatcc gccacgacaa
     6841 cactctctct cgccccttca aggactacgg tccacgcgac cgcgtggaca tcatcatcac
     6901 caacccaccg ttcggcggca tggaagagga tggcatcgaa aagaacttcc tcgccaagca
     6961 ccagacccgc gaaaccgccg acctgttcat ggcgctgatt atgcacctgc tcaggcacga
     7021 taccggacgc gccgccgtgg tactgccgga tggcttcctg ttcggtgagg gggtgaaaac
     7081 tacgctcaag cgcgaactgc tggaagagtt taacttgcac accgttgtgc gcttgcccaa
     7141 gggcgtgttc gccccttaca ccagcatcgc tacaaacatc ctgttcttcg agaagggcgg
     7201 ccccacaaag gacgtatggt tcttcgagca cccctatccg gcaggctaca agagctattc
     7261 ccgctccaag ccgttgacaa ttgaggaatt cgatcttgag aagacctggt ggggcggccc
     7321 gcagcgcaag gggcgcaaag ccaccgagca tgcttggaag gtctctgcga aggatctggc
     7381 tgctcgcaac tacaccctag actgcaagaa cccatacgag gtggttgtcg aactgggtga
     7441 tctggacgaa ctgatggccg aataccagga cattacccgc cagttgcagg ctgctcaaca
     7501 ggcattgaaa gccgaactgc tggccgcgct cgaggccacc agcatggagg cgaaatgagc
     7561 gccgagctcg tgtctctcgt tgcggcccct gaaggctacg tcaacttgtt gggcgaactg
     7621 aagaactgca tctacactgc ccagcagtgg gtcgcgctgg ccgtcaatcg cgaactggta
     7681 ctgcaggtcg agcgcgaacc tggggagcga gcatgaatat gcacaccgcc cagctgctgg
     7741 aaaagcactt cgataccgcc tttgcagcac ccgatggcat caagaagctg cgcgaattga
     7801 tactgacgct agccatgcag ggtaggctgg tcccacagga tccaagcgac cagcccacta
     7861 gcgagctgct ccgagagatc gacgtcgaga aacaacggct gataaagaaa ggcgcgatca
     7921 agaagaccaa gtccttgccg tcgataaagg aagaagaaaa gccttattcg ctgccgcagg
     7981 gatgggactg ggcacgcctg caatccttct ctgactacaa cggaaggccc aatattgatc
     8041 cgagcgaaat cgccgaggac acttggctgc ttgacttgga ggacattgaa aaggaaacct
     8101 cccggcttat ctgccgagca aggtattccc agcgtgaatc gaaatcgacc aaatcaacct
     8161 ttaaagaagg agatgttctt tatggaaagc ttcgcccata tttggataag gtgttggttg
     8221 cagactcggc cggtgtctgc actacagaga tagttccaat tgttccatcc aaagcagtca
     8281 tacctgagtt tttacggtgg ttgttaaagc gcccagattt cctttcccac gtcaatacgc
     8341 tgatgtatgg cgtgaaaatg cctcgcttgg gaacggagga tgccatccat agtgttcatc
     8401 cgattccacc agtaaatgag cagtaccgca tcgtcgctaa aatcaacgaa ctgatggttc
     8461 gttgcgacgg actggaaaaa ctgcgcactg cgcagcaggg ggggcgcgtg aaagttcatg
     8521 ccgcagccat taagcaattg ctgaacatag ccgaacccga ccagtaccag cgtgcccagg
     8581 ccttcctcgc cgaacacttc ggcgagctct acaccgtcaa ggaaaacgtc accgaactac
     8641 gcaaggccgt cctacaactg gctgtcatgg ggaaactcgt cccgcaaaac ccgaacgacc
     8701 agcccgccag cggactgctg aaagacatag aagccgacaa acagcggctg ataagcgaag
     8761 gtcagataaa gatccccaag ccattgccgc cggtaacgaa agaagagaag ccttatgcat
     8821 taccgcaggg gtgggagtgg gtgaggctgg gggaactggc cgaatttatc aatggtgaca
     8881 gagggaagaa ttatccaaat cgcgaagagt atgtgtcgga agggattccg tggatcaata
     8941 ccggccatat tgatcccgat ggctcgttaa cctgtcgcga catgaatttt attacaaagc
     9001 ataaattcga tagccttaat ggaggaaaaa taaggctcgg ggatttggtt tattgcttgc
     9061 gtggagcgac ttttggtaag accgcgatcg tcgaccctta cggcgaaggc gctattgctt
     9121 cttcgctcat gataattcga ccttatgtgc gagtttttaa tcgctatatg taccattacc
     9181 ttgttggccc ggtaggtaga ggtcagatat tcagatttga taacggttcg gcgcagccaa
     9241 atttatcttc taatagcgtg cggtattatg tgtatcctct tcctcctttg tctgagcaaa
     9301 agcgcattgt cgctcgcatc gatgctttga agaatttatg cgattcgctc gatcaaaaga
     9361 ttgaagaggc aacccgtaag cgaacaaatc tgctaagtgc tctgatgagt gcgcagtcga
     9421 agggaggtgc agttgacgat gcccagcgct catcacgttc aacagcccaa tttattgacc
     9481 tcgccaccta ccgcgccagc atcggctgct atgcgttcaa caagctcgcc aacgcccaat
     9541 acttcggtcg aactgctgcc gccaaggtga tgtacttggc gcaagcgcat attggcttgg
     9601 atctggatct gaagcctgag cgtaaagcgg cggggccgct ggataagtgg atttatgatt
     9661 tcgagaggca aggccaaggc gagagctggt ttgaggtcaa tgaaagaacc ttgaccaacg
     9721 gcaggaaaaa aacggagtac cgctgcttgt caggattgtc ggagcctgcg gccaaagccg
     9781 aagccctgat gttgcccggt cagaaggcgg aatttgaccg cctgatctac gtcctggcag
     9841 acaagaagac cgaagaggtc gaaatcctcg ccacactttt cgcagtatgg aacgattttc
     9901 tgatagatgg tgttcgaccg acggatgcac agatcatctc cgatgttcgc gagaactggc
     9961 acgaaagcaa agcacgcttc accgcagccg aacttggccg atggcttgat tggctacgca
    10021 gagagaacat cactcctcga gggctgccac cgagaaccgt gcagcaatca agattgggat
    10081 ttgattaacg gtgagctttg tatggcagcg agaggcacgt tcgcaggact gggaggtgcc
    10141 cgaagaaaaa gactcaagat ggtaatgaga taatcaaatg accaacctgc aagatctggg
    10201 cctcgcctat cgcaaagcga aagttgatct ctattattcg tcccatgcct ctctggatga
    10261 tattgcaagc tatgaagaga atttgcattc caacctttcc ttgctgcagg aaaagatcaa
    10321 tggcgaagat gaggcctggg tgacatcacc ggaattcata ggcacttgga cactggtcac
    10381 caagtccgtc gagatggatt gctgggcgaa gtacaagaaa gagaatagca gtggattggt
    10441 tttctcctcg cccattgatg agtggcagca tgcgctgaaa gccttggctg agaaggaagt
    10501 gccagaaaag ccaaaagcgg aattccgaat aatggcccga tgcagcctgg actttcatgt
    10561 gctctccacc ttatggatgc tggaagtcgg gcagttattc gatgcaagat tgagcgagtg
    10621 cgcatatggc aaccgcttgc gccgcactca agatggcaag ggcatcaata agctgtcgct
    10681 tggttcgttc cagccttatc tgaagccctt tcgcgactgg cgtgacaagg gtattgccgc
    10741 catgcgtgcc gcgctggatg ccgacaaaaa gattgtggca ttaactgcgg atgtcagctc
    10801 cttctatcac gagctgaatc ctggcttcat gttaaatcca agttttcgaa aggaaattct
    10861 tggtataaag ctgaataaga gaaagaaaaa actacaccgc ttgttcattc atgcattgca
    10921 ggcctgggca gcagcaaccc cgttgaagaa aggcttaccc gtggggctgc cggcatcggc
    10981 tattgtcgcc aacatggcgc tggtcgagct ggatcgctgc atcgaacatc aggttgctcc
    11041 catctactac gggcgatacg tcgatgacat tttgctagtc atggagaacg gggctggctt
    11101 cgattcgacg ctggatttat gggaatggct gtttggccgg tcaaacgaaa tgctgggctg
    11161 ggtgggtcaa agcaaaaagc aggttcgctt caggcccgct taccttagca gaggtagggg
    11221 taaaagccgg gtgcgttttg ccaatggaaa gaacaaggta ttcattctgg ccggtgagcc
    11281 gggtaagacc ttggtggacg ccattgctca tcagatttac gaacgcgcca gtgagtggcg
    11341 agccatgccg cggttgcctc gatccgctac gcatgttggc accgatctgt tggccgccac
    11401 acaaagcgac ggcgaggccg ccgacaacct gcgcaatgcg gatgcgctga ccatgcgtcg
    11461 ggcaggcttc gccataaaac ttcgcgattt cgaagcctat gagcgcgatc ttttgcccga
    11521 agcctggaca gcacatcgtc gcgcgttctt ccgcgccttc acccagcacg tgctggtgtt
    11581 accgcagttt ttcgacctgg ctgtctatct gccccgagtc attcgcctcg ccacggcctg
    11641 tgaagacttt tccgatctac gccgaattat cgaagcgctg caaagactct gccagcaggt
    11701 acaggagcaa tgcgacatca gtgtcaaagc gtggcctgaa aagaagagta agccgaacgc
    11761 tacggagatg ctggatcgct ggaaagggca gcttttctcc agtgtccggg aaagcataac
    11821 ggccgcattt cctccccgct tgtccaaagc aggcaaacag gcgtggaaga cctatatggc
    11881 cgactgtcat tccgtcattg accttgatgc ttttctgtcc tggccgttat ccgtaaaaag
    11941 ctttcaagca cagcaggccc gcctgttctc gcttgacctt gcacatctgc cattccgctt
    12001 catcgggctg ccgaaggaaa tggtggcaca gcgcggtatc cccgccaaaa agaccatcgt
    12061 aggctgcgac aaagctgccg agttgttgtc tggcgctgta ttcaagggcg cgcagacact
    12121 tacccagtgg atcggcttca agcatttgcc gcaggggctg ccgttcgcga ctcggccctt
    12181 caatctgcct gagctattta ttattaatcg ccatgcttat ttagagacga cgcaggatga
    12241 catgcaggcg gtagtactgt ccgtgcgcgg ctttgagctg ggagagaaaa cgcctctctt
    12301 cgataaaaac aacgtactgc aaataccaga tggtgtaacc ccaaggaaat gcagtattgc
    12361 cgtatccagt tggcaaacaa gtctggatag ctggacagcc agcgtgatgt gcatgccgga
    12421 tcccgatgcc gaacgctatg ttcgcctctg tcgcctgctg gatggcgtaa ttgcccagcc
    12481 cagggacagt cgctacctga tcctgcctga gctggcactg cccgcgcact ggttcatccg
    12541 tatcgctcgc aagctgcaag gtcgaggaat ttcgctgatt accggcatcg aatacctgca
    12601 cgccagcaag tcacgggtcc gcaaccaggt ttgggcggcg ctgtcccacg acggtctggg
    12661 ctttccctcg ctaatgattt accgtcagga taagcagcgg cccgccctac atgaggagca
    12721 ggagttacag cgcctggccg gtttggagat gaagccggac aaagcgtgga aaacaccgcc
    12781 catcattcag cacggcgact tacgcttcac catgttgatc tgcagcgaac tgaccaacat
    12841 tcgctatcgc gctgatctgc gtggcaaggt ggatgtgctg ttcgtgccgg aatggaatcc
    12901 agataccgaa accttcaatg cattggttga gtccgcggca ttggatatcc atgcctacat
    12961 catccaatgt aatgataggc agtacggcga cagccgcatc cgggcccctt acaaggacag
    13021 ttggaagcgt gatgtgctgc gggtcaaagg tggcgtcacc gattactgcg tgattggcga
    13081 aatcgatgtg caagcgctgc gtcaattcca aagcagccac cgttcaccag caaaaccatt
    13141 caagccagtg ccggatggat tcaatgatgc gatggatcat cagcgaaaga tattgcctgt
    13201 gggcaatgac gagtgagctc tactagatct ggtgccaaac gcttacgatc ttctcagcaa
    13261 atggcgcatg cttctggcgg tggatctgcg ggcgtctcat tttccatcac ttaagatcgc
    13321 gttcgagctg atgatcgatt ggccttgatt taagacgcga gggcgcctag aggtgccttc
    13381 ggtatctata gagagcaggt ggatatcact ccggcctaac ctcccgacaa gcccactcaa
    13441 ccaacccccg gcaagccagg aacaaaccat ccacaacccc ctcatccaga tgcttctccg
    13501 gctccgctgc cacccggcag cgatccgccg cgtgcagcac ctccagcaca gtcagcgccc
    13561 ccaccatcgc gcgctcgctc ttcgccaggc tcacgcggcg gccgggtgac acatcgttct
    13621 ccggccaggg cagcccgtcg gctccctcac ctgcgcgaat gcgcgtgagg atgccgagca
    13681 gggagttcag gtcgggcaga ggcgtgtcgt cgttgatggg ctcaacaacg gtgtacgagg
    13741 aaaaggtgtc ggactttttc atggcgtcgg cttccgtggc tgtacttaac agcgccaccg
    13801 tgaagaaggt ggcggacgat gcgtggctgc aaaccgggac gaagtagtgc cattaccggt
    13861 gggtccgaaa acccccacgc accgcccgcc atacaggccg acggattgcc cgccggcacc
    13921 gcttggggac ggtgccgacg gacaagcgca aacaactggc acaacaatcg tcgcgggttt
    13981 gcagacccgg agccacccgt tgtcggtggc gcgccatggt gtttacgcgg tcgctccgaa
    14041 taccaattga aattcgcgaa gagatcgcag aattcgagag cggtaatcta ttgtggcacg
    14101 cactattcgt gccgtaggcc tcatgatccg acgcattcgc gcacacgcgt tgctaatcgc
    14161 gaacaagagc gtcgcaatcg cccgcacctt caggggatag cgagacagcc gcctttacaa
    14221 caattcgtat tccgagccgg gccgcagcac agcgcgatca gtcagaccgg ccgaaaagcg
    14281 gtccaaagcc gacaccgcgg gaacgcagca aaaacctcaa cccacgccgt cctcaatcac
    14341 cgccgcattc cccaccagca actcaatcat cgcccgtgca gcagcagact gccgccgatg
    14401 cggcgcatag atcaccgaga atggccgcga ccgcccgcgc agctgcggca acacctccac
    14461 cagctgcccg cgctgcaacc gctcgcgcac gatgaacgca tagctctggc agatgccgat
    14521 gccctgttcg gccagcgaca ccacgcccag cacatcgtcg gacgtctcga tggacgaacg
    14581 cggcagccag tccacgtcgc gcccatcgtc gcgaaagatc cacggcgcca accgcccggt
    14641 gcgcggcatc acgaacggca ggcacaggtg ctgctgcaga tcctccagcg tctgcggtgt
    14701 gccatgcagc tgcaggtact ccggcgaagc caccagcacc aaaggcgcat cctccagctt
    14761 ccgccccacc agcccactgt ccggcagctg gcccaggcgg atggccaggt cgaagccttc
    14821 ggccaccagg tccacgttgc ggttggtgat gttcagttcc acctgcacct gtgggtactg
    14881 ctgcgcaaag cgcgccagca cgggcggcag ccggtagtgg ccataggtgg tgggcacgct
    14941 caggcgcacg cggccggcca gcgcaccgtc ctgggccagt acgtcgcgct cggcgtcgtc
    15001 cagcaggccg aaggcggtgc gcacctgttc cagatagagc cgcccggcgt cggtcaggcc
    15061 cacgcggcgg gtggtccgct gcagcagctg ccggcccagc cgctcttcca ggcgggtgac
    15121 cgcgcggctc agcaccgagg gcgtggtgga cagcgccacc gcgccggccg tgaacgagcc
    15181 gtgctcgact accgccagga acacctccac atcgcccaga tagtcgaact tgcggctcat
    15241 ttggctctcc ggggaacaga tgttttgcga tggggccaat ttatcgccgc tggggcgatg
    15301 aataaagtgg cggccattcc ccgataggag ccccccatga acctgatgac ccggctggcc
    15361 gcagcgctgg ccctgacctt ggccgccagc ggcgcacatg ccgccaacgt gctggtggtg
    15421 ctgtccgacg aaaaccacct ggacctgaag gacggcaagg tgctgtccac cggcttctat
    15481 ctcaacgagt tgatgcagcc ggtcaagctg ctgctggacg cgggccacga ggtgaccttc
    15541 gccacgccgc aggggcgggc gccgacggtg gatgcgtcct cggtgacgcc ggcgtacttc
    15601 ggcaatgatg ccgcgcagct gacgctgcac aaggatctgc tggagaaact ggcgctgacc
    15661 tcgccgacgg cctcgccagt ggtcagcctg gcgcgcatcg agcagcaggg ctacgcgcgg
    15721 ttcgatgcgg tctacattcc cggtggtcac gcgccgatgc aggacctgct gaagagcccg
    15781 gcgctgggcc ggctgctggc cgacctccac cagcgcaaca agaccaccgc gctggtctgc
    15841 cacgggccga ttgcgctgct gtccacgctg ccggatgcgg gtggtttcgt ggcaaagctg
    15901 gaagcgggtg cgatgccggt tacgccgaag tggatctaca gcggctacca gatgacggtg
    15961 atcagcaacc aggaagaaga gcaggccaag ccgctgctgg gcggcggtga gatgaagttc
    16021 tacccgcaga ccgcgttgca gcgggcgggc gcgacgttca gcagcaatgc tacgccgtgg
    16081 acggggcatg tggtggtgga ccgcgagctg atcaccgggc agaacccggc gtcggcgctg
    16141 gaggtggggc agcggttggt ggagcggttg aagtagactc gttcgctcca agcgctgttt
    16201 tgacgaagag cttcactagc ggcttttcag tgggtcatga catcgccgaa cgattcaaag
    16261 ccgcacaccc aacgcatcta gtgtaggcgt agtcatcgtc cccgtagcac gaatgccgtg
    16321 cgccaactgg aacatgcgaa gtgccgactg tgtctccggc gtcagtgttc cgtcaatggc
    16381 gcccgggtcg tagcccttcg aataaagtgc ggcttgcaca cgcatgatca gcagcttgag
    16441 cgcatcggca tcgcgcccct cagaaatcgg cttggctgag gagccgtgat ccactgtcag
    16501 attgttggtt gtagcagcct tggtccggct cgcgggctga aggctttgcc cctgataggt
    16561 acctgtgccg cttccacttc caccgctgct tctcgaactg gcaggtgcag tgtaggtgct
    16621 gggtggaggt gtataggtcg ctggtggtgg ggagtaggag cgatatgaac tgccagaccc
    16681 ggaggaatgg gagcggtggg agctatgcga tcgatgtgag ctgtggctgc ggtgcccggc
    16741 gtacagattg tggcgccctg cattgagcga ggtgctgagt acggttgcgt acttgccatc
    16801 catctccgaa agtctggaca ggtcggattg acccttgggt ggctcggtgc caagtgcccc
    16861 cagcgtggcg gcgctgacaa tcatcaatgc attggacatg atcagatttc cagtacaggg
    16921 gagatcgccc ggctggtcca ggcaggggtg atccaggaaa agaacccgcc gcatcgcgat
    16981 cgtacggcgc acgcgtcaca ggcgggaagg tagtcattct tccatggaga gatgctttgg
    17041 accgcataag gccaaagcga gcggtccagt gcgcaaagag gcaggttgta gagcgaaacc
    17101 gggatgcccg cttctgcgag agtctcaacc gcttcagtca gggtgtgggc atagtcaatg
    17161 gggtctgccc atagatcagc ctggtgtgct ttggcaaagc caatcggctc aatgcccatg
    17221 agtgcgacat gctcgacgaa tggcaggttt cgccagatgt agcgggcaag ctgcaccagt
    17281 cgctcgacgg taggccgaac cagaacgact cggatttcca cccgttggcg cgctgcatcc
    17341 agtgcgtaca ggccgcgtag tgtctgggag aacgcacctt cgctttgcac gacgtaatcg
    17401 tgaagggcgt aatggtcccc atagagcggt accccccagc tcagattcgg atggaggtcc
    17461 gcaaaccggc tgtgtagctc aggatcgcgc aaccgtccat tggaaaggat atggatgtgg
    17521 gtattcggta gtttctcagc gcacttgcgt acgatgtcga ccaacccgct gcccagcaat
    17581 gtaggttcgc cgccactgat cgccagtgat ggctctgcga catcgatcag gtcgatcaaa
    17641 tcgaggagat gatgtacacg ccagtcgtcc tccacctcgc gcgggggctg tgaacacatc
    17701 aggcagtagc tgttgcagcg ttcggtggca aacagaacgt tgccggtatc cccgcgccga
    17761 tagcggatgg ctaccttgcg ttgaagggga ttgagctcga cgacatcacc ggacttgcag
    17821 agggctgacg ggccatccag gcgcacgtgt ggaacatcgt caggaacgtc gaagccttgc
    17881 ggcgtgagga cagctcccca agggaggcgc aacaacgcat cgctgagctg ttcgggtgcc
    17941 acctccctga catccagcgc cattcgctgc aggggcaggg aggcttgggg gaagtcgcca
    18001 agatcgacca tcttcagcaa agatgccttc gccgatggcg acagaaccgc tttggtttca
    18061 agcggcagca tcaatgagat cctcagtgtt cgctttcgga acagcccagg aacgcatcat
    18121 ccgacggccc actagatctt cccgctcata gcgttccagc aggaaatcga atagccccat
    18181 gttccgggcg cagaaatcgc tgctcggtcg gtgaccaatc gggtcaccct ggcgtgcgta
    18241 gtgctcgatc gggtcagcac cgcacagtgg cacgaacgcg cagtcagcac aggtcggaag
    18301 cgcctcagcc acgcccgctt caagcagtcg ggtcatggca ggggagccaa gccagtgcgc
    18361 taccggttgc gaaacatcgc ccaacgcgaa tgtgtcatct cccatggccg ccagcatccg
    18421 cgcctcgtca gacggataga cgcgcccgtc atggtcatag atcaccgcac caagacccgc
    18481 gcctgaaggg gagcgaagat caacgtagcc atgcccgaat gaggtgaaaa gctgggagag
    18541 cagcaaagat gcgtaggact cctccatggc gtagccagaa cgattgacca ccatcagatg
    18601 cgcgaaggca cgccggtaaa aggcgaggaa atccgccgtc gaatagcctg tgcggtgggc
    18661 agtcctgttg gcgaatccat agggactcag agggcgcagc gagatgctgt gaaaaccaag
    18721 cttctggtat tcgtcaatga tggcttcggg cacctcaagg ctgcgccggg tcagcgtcgt
    18781 cagcgccgac acgccgtcat cacccagcca gcggcgtccg agctctatgc cttccacggt
    18841 ccgccgatag ctgtcgcggc ccgggcgggg gcggttggca ttgtggagcg attcggggcc
    18901 gtcgagcgat gtcgatagct tgaagcgatg ctcagcgagg aatgccagtt gggcttcagt
    18961 gaggtcgtgc agagtggatg caagaacaaa acgaaggtta cggccagcag agcggttacg
    19021 ttcgacaatg cgccgagtaa tggctatgac ctgctcgaag ttgagcagtg gctcgccacc
    19081 ttggaactca atggtcagtt cccggcttgg ccactcaaac agccgctcta ccgcctgttc
    19141 ggcgtgcgag ctggccatgt cgaaggctgt ggctgttgtc tcctgccgcg acacctggca
    19201 gtagctgcag gtgtggtggc atcgaagcga gaccacaaag atgtgcagcg ccggcccgcc
    19261 caggatatag gacttgcggc tgcgaatctg gctcagcaac ggggacaggc tgctgcgttc
    19321 tgtgcccgcc actgccaggt ggcgggcctc caggtcggca aagagtgccg aattggttgg
    19381 tagctcatgg gcggcgaagc gctgcaggtc atgcatgtgc atgagcagcc agtctcccgc
    19441 catggaggat acaaatgccc gatctggatc ccaaggcaag cgccggaagc ggaacggcag
    19501 caactgatac gcctgagagg cggcaaacgc ctctggatgc ctgaacttgg acatcaggcg
    19561 gcagtcgagg gctgggcctg gtgtagcgct gccctgatca gttcgagttg aagcccatgt
    19621 gtttcggccc ggacggacgc tctgatgcgt tcatcgagca gatcacggga gaaccgtgta
    19681 gagaggtcga ccggcagcgg ggagccatcc gtggtagaaa aaaccaccgc aagatcagcg
    19741 ccttgattca acagttccac accaaacttg cccgtgtagc gatgcgctgc gcgggccacc
    19801 atgtcatccg aaaacagttg tcgatcaaca atataatgcg agcgttccat tgctcatccc
    19861 ccctggatac gcgaactttg cgccctacgg gagaatgttg caactgtggc agggggggcc
    19921 gcgtttaagg tggccggagg caggggctgg cacaggttca tcggaccatc cttgggtgaa
    19981 tggggctgac tagggggtca aatcagcctt ctgccgagag ctagggcatc cacgcgtggc
    20041 gtggatctac acttgggcct ccgtcgtaag gaatctctcc catgttctct ggaaaggtcg
    20101 cggtggtcac cggctccacc agcggtatcg gtcttggcat cgccaccgcg ctggcgcggc
    20161 aaggcgccaa catcgtgctg aatggcttcg gtgatgcggc agagatcgaa agcatccgtt
    20221 cgcagctgga aaccgagttc ggcgtgcggg tcgcgcatga tggcgccgac ctttcgcgtg
    20281 gcgaggcggt gcgcggaatg atcgagcacg ccgttgcgac gatgggccgc atcgacatcc
    20341 tggtgaacaa cgcgggcatc cagcacaccg catcgatcga ggagtttccc gctgaaaagt
    20401 gggatgcgat cctggcgctg aatctctcgg cggtgttcca tgcaacggcg gcggcgttgc
    20461 cgtacatgaa gcagcagggt gccgggcgca tcatcaacat cgcatcggtg catgggttgg
    20521 taggctcggt gaacaagtcg gcctatgtgg cggccaagca tggcgtggtg gggtttacca
    20581 aggtgaccgc gctggaaaac gcgggcaccg gcgtcaccgc caatgcgatc tgcccgggct
    20641 gggtgcggac ggcgctggtc gagcagcaga tcactgcgtt ggcgaagaag gagggcacgg
    20701 atcaggaatc cgccgcccgc gcgctgctgg ctgaaaagca gccttcgttg cagttcgtga
    20761 cgcccgagca actgggcgag atggtggtgt tccttgcgtc ggatgcggcg gcgcagatca
    20821 ccggcacggc gctgccggtg gatgggggct ggacggcccg ctaattggcg ggttgtgcgc
    20881 gccgctgcag catcggcagt gcgaccagcg tggcgaggat ggtgaacagc accagtgacg
    20941 accccacggt gccgaagccc aggccgcctt tttccagcgg cttggtgagc aggtcgccga
    21001 aggtggcgcc gaacgggcgg gtgagtacga aggcaatcca gaacaggatg acccggttga
    21061 tgcccttgat gcgggtggcc agcgcggtga gcgcgatgag gctgccgatc agcagcgcgc
    21121 cgccggtgaa gcccagcccg gaatcgtcgg cgaggaaatc gcctagggcg gtgccgagcg
    21181 tgttggagaa cagcacggcg gtccagtaga agccttcggc gcgacgcgat gcgatgttgc
    21241 tgaccgagat cgacttctcc gatacccgcc aggccagcag caccagtgcc aggcagccgg
    21301 ccagcaggct ggcgccggtg gcgtagccga ggccgagcgt gcggtcgagc aggtcggaca
    21361 tggtggtgcc ggcggtgctg gtggccaaca ccaccgacca gaacagcacc gggtggaagc
    21421 gccgcgccga cagctgcacg gccagcaggc cggcaaagac cgtgagcagg atggccgagc
    21481 tggcgacgta gcccaggttg agtgtcatcg acagcaggtc gcccgcggtc tcgccgagcg
    21541 tggtggcggt gatcttcatc acccagaagc cgagggtgac cgccgccact ttgctgtgca
    21601 gggaatctgc ctctgaagca ctcatcgaac gtcgcctggg gagcctgcgg gtgatgctgt
    21661 ggcgggcggc gtcggagtgt ggtcggaacc gggtttggca gcggtgaggg tggggcagcg
    21721 ttcagcaggg gaacgcgcta cgctgcggcc agcatccagg acggggagac agggaatggc
    21781 cggttcgatt ccatcgtttg cgttggcagt gggcctgctg gtgttgtccg cgtcggcagg
    21841 cagtgccagc gcgcagcccc gcgacgccac gtattccagc gtctgcaggc atgccgactc
    21901 gggcgatctt cttggcctgg aggtgtcgtt tgtcagcgag gccgatggcg gctacgcatt
    21961 ggtccagcgt tacgagggcg cggccatcgc gccggtgctg atgcaggtca agcaacgcgg
    22021 gcgtgatctt gtgctggtga gtggcgctac ggattccatt gcgctgcgcc aggacgggaa
    22081 gatcctgcgg ctgacctacc ttgatgggca gctgagcgct gcgggcagct cgtcggaaac
    22141 cctgatccca tcgttgcccg tgtggcaggg aaagagcgtc gccgcttgcc gttagcgcgg
    22201 cgacgctcct tcagctcggg ctggggtgtt cagctcggct tggcaagcac acatcggcct
    22261 tctgcctgcc agtcggcgac cagtctgtcg gattgtgcag cttcctttgt cgtaaggcac
    22321 cacatcggcg acgcgatacg tgagtctgtg ctggagaggt ttcctttccc ttcagcagct
    22381 tatcgaaccg atgccctccg atgagcgcgt tccttctgga agcatccctg caagcgcggc
    22441 tagtttcgtg tcgctggcgg agtcgggcca gcgcgggtca cgcacggaac gcagatatgg
    22501 gtcgattgat tgtggtggta ggagacagaa ccagcggcgg cggacgcgtc atcaccggcg
    22561 cgccattcac ggacatccat ggcagcgccg tggcccgaat ctcggacaaa gcaacgtgcc
    22621 ccaagcatca gggcatcttc tcgattgtca ccggcgactc tacctggcga gtggatggcc
    22681 agccagttgc ccgggatgga gatcgattgg aatgcgggtg cagcctgatg gcgggcacgc
    22741 agttgacggt ggacatttct tcaggcggag cacccgcgtc tgaacagtct gttgcgccgg
    22801 ttgcggagcg gtcaccatgg ggggccgcct ctacgatgcc cagcaagccc atctgcgagg
    22861 catgtctgcg ggctgcggca gaccgcggta cggctttcct gcggagatga acatgaacta
    22921 tgccatcgtc gatgcagcac gctgtgccaa cagcgccgct gttctgcacg ggtacgcagc
    22981 ggagggaagg gctcgagcgc tgttcgcagg gcagccggaa agccctcatg cggacgccgg
    23041 accttggctg gttattctga gcgaggaccc ggtcctgcat cagtggttgt tcaatctcga
    23101 gccgatcccg ggtgcagtct gccgcttctc cagtacggtg aacgtcgacg ctgtcgtagt
    23161 gcaccttcag gcccgcatgg cgctgcagct gacggatgga ggcatggcgc tattccgcct
    23221 ctgggacggc cgcgcgctct accggatgtg gggagtaatg acgcaggcgc agaaggccgc
    23281 gttcatagcg ccgttctcac gctggtcggt acaactgcag ggtaggcgtt gggagctgga
    23341 tcacatggcg gtggagaaac cttgatgctc aagctggttg ctcgacagga agctttgctg
    23401 cgcctgcctg atcccttctc gttcctgcct cgacttgcgg cggagatccg gcgtgatcta
    23461 ccagagcggg tcatggggct ggatgatgct gcgctgctgg cggagacgga ccgctgctac
    23521 acctatgccg cctatgaact tggcgtcact catctggaaa cacttgttgc atggaccaag
    23581 gtggatgttg gcagcggtgg agagcttcat cgcaatgccg aagtggacat cgctgtgcgc
    23641 catgcggaca accccaacat ccaggcagca gacctgttgg gcgccctggt cgctctgcat
    23701 cgctggccga aggacgacgt gtaatggctg ccattccgat tcgatggggg ttgggaaaac
    23761 tggctgaacg ggccgcggca gcggcggcgg cggccgcagc ggcggcagat gcggccaagg
    23821 acgtggtgaa gggcaagccc gacgtaaggg cacgcgacgt ggagtgtgca gacgctcagg
    23881 atgccagtga ttgcaacgag tgccggctcg gtgatggcag ggtaggacag ccgcctacac
    23941 ctcggtacat cacgcggcgc acgcgtatca actacgacta tcagctccag atagcgaaca
    24001 tgtatgccgg cccggagaga ttcggctatg tgaagcgggg ggacaacgcg gacgaaatcg
    24061 tgaacttgga tcttgaatcg ttcaagagcc tgtttggacg aggaggagag ttcacaacgt
    24121 tggaatggtt gttcgcaggc atttcgttcg acggcttctg gaggagccga tgcaccgtgc
    24181 tagaggccaa gggcaacttc ggctcattct tcaatgctga cgggtcgtta tcgaagccct
    24241 tcgcacgggc catgacggac caatggctac agagcttcac caagcaggct atggcggttc
    24301 gtgcaacagg accacaggga aagcttgaat ggcatttcat ggatgtggcc gcctccaagg
    24361 caggcctaat ggtcggaatc cctcctgcgt ctgtgcgcgt cacccctttg gtcattggaa
    24421 gaatgccttg aacattacga ttgcctgtca ctttcccgcg gcagcccgca cgccctttca
    24481 agtgtgggaa gacgttgttg gaattacgtc cagcctctca aacgctgacc cactcttcgc
    24541 gaattggtgg gccgcgccac gtttatcaag tgacgcttac gtacctgttg gtgaaggtga
    24601 cgatcttgtt gcccgtgtgc aggaggatga catcaagctc gccaaggagt atcccggtca
    24661 gccctcgatt ggaagcaatg gcgcgctcct cacaaacgca gggaatgaca aggactggct
    24721 gagacgaggc ggtgttgggc tgagttatat gcccgcgctc gggatgcttc gacttcatgt
    24781 ggaccgcatt gagaaggtgt tcgattcccc tgtcagtgtt cttgagtcca cgctttcggt
    24841 gctgctgaac agccttccca tcacgtttgc aaagacaaat gttcagcagc ttgtggaagg
    24901 ggagttgctg ctctacagcg ttgatcgtgc gccctttcca catcgggaat ttctcggctg
    24961 gatgggctac gtagacgcct cgttgaccca agaccaggtt cctgccgccg caaggcttga
    25021 gcgtcgcggt ggtggcaccc tcatcctcgc cacggaggta ctcgatcttg ctgatgcaca
    25081 tgccatcaaa caggccaacc aggtcgagat gagtctggtt gacctggggc tgcttccggt
    25141 tacggatccc ttgctgggat agcgcgatcc atgctggccg gtgaatcaac tcggcttcgc
    25201 aaacacatcc aatcccttac cggtctccag ccacgacttc aggctcgaca gcacgatcgg
    25261 ccagccctgg cggatgccgg tatccatgcc actgccgggt tccagttcgt cgtgggtgac
    25321 ggtcagccgc accatgtcct ggtagggcac gatctcgaag gtgacccggc tgtaggcatc
    25381 cgggctctcc gcttgcgagg cggcggccca ggtgatcacc agccgcgagg gcggggtgct
    25441 ttccaccact tcgccaacca gttcaaccga gcgcgtttcg ttggcacgca catgctgcca
    25501 gcgcgagccg ggcttccagt ccgagacgtt ttcgtggccc cagtagcggc tggcgatctc
    25561 ggggcgggtg atggcctcga acaccttctg cggggtggag gcgatgtaga tcacgtggat
    25621 gaagcgggtg gactctgcgg acatcgtcat tctccttcca gttctcgttt caggtcatgc
    25681 agcaggctca ggcgctgctg ctcgaacttg cgtacccagc gctcgtagac ttcgtgcagc
    25741 ggcaccgggt tgatgaagtg cagcttctcg cggccacggc gcacggtgct gatgaggttg
    25801 gcgtcttcca gcaggcccag gtgctgggtg accgattgcc gggccatgtc catgtgttcg
    25861 cagagctggc ccagggtctg gccgttgtct tcgcagagca ggtccagcag cgtcctgcgc
    25921 gtggggtcgg ccagtgcctt gaacaccttg tctgcattca tgcggggcgt cttcagttcc
    25981 agttgtcgat cctgacgtcg tgcggattgg gttggcccgt gccggtttcc agcagggcct
    26041 tgaggctgag caggaacacc gcccacttgg tgctgcagtg ggaggtgaat tcgacgcgtt
    26101 ctttccagcc ttcgtgggtg aacaggacga tgcagtagtc gtcttcctgt ttcagcgcga
    26161 agcgtgcgtg ggtgccgatc cattcggcgg ggccggcgag gaattcccaa agcaccagct
    26221 ggccgggaat gagctgttcc agcttcattt ccatggcgcc gatttcctgg ccgttgttgg
    26281 tgaagcgcac cttgaccgtg ccgccgacgt cgcggtcgcc gtgggtgtct tcggcccacc
    26341 aggcggcgac gccttcgggg gtggccaagg cttggtacac ctggcttgcg ggggccttga
    26401 tgccgaccct gtgtgcgata tccaccatta cgggttcctc gccatgggcg ggcaggtgcc
    26461 gtccttgggg tggactatag gcaggcaaat gcctgcatgt caatcgtcgg tgtggagggg
    26521 atctgccagg catggcctgg cactactgcg gcatttggtc gcaagcgctc gcaactattc
    26581 ctaagcggtg ctgacgcatg cggcgtttac agtggggtta ccccctccag gaaggagcag
    26641 tgcatgtact acagcagtgg caactacgaa gccttcgcgc gcccgcgcaa gccggcgggt
    26701 gttgaaggca agcgcgcgtg gttcgtcggt tcggggctgg cgtcgctggc cggtgcggcg
    26761 ttcctgatac gcgacggccg catggccggt gagcgcatca ccattcttga gcagcagcag
    26821 attgccggcg gcgcgctgga cggactgaag gtgccggaga agggtttcgt gatccgcggc
    26881 gggcgcgaga tggaagacca cttcgaatgc ctgtgggacc tgttccgctc gattccgtcg
    26941 ctggagatcg acgatgccag cgtgctggat gagttctact ggttgaacaa ggatgacccg
    27001 aactattcgc tgcagcgggc cacgatcaat cgcggcgagg atgcgcatac cgatggcttg
    27061 ttcaccctga gcgagcaggc gcagaaggac gtcatcgcgc tgttcctcgc cacccggcag
    27121 gagatggaga acaagcgcat cgacgaggtg ctgggccgcg atttcctgga cagcaacttc
    27181 tggctgtact ggcgcaccat gttcgcgttc gaggagtggc actcggcgct ggagatgaag
    27241 ctgtacctgc atcgcttcat tcaccacatc ggcggcctgc cggatttctc tgcgctgaag
    27301 ttcaccaagt acaaccagta cgaatcactg gtgctgccgc tggtgaagtg gctgcaggac
    27361 cacggcgtgg tgttccagta cggcactgag gtgaccgacg tcgacttcga tctgcaggcc
    27421 ggccgcaagc aggcgacgcg cctccattgg acccgcgacg gtgtggccgg tggcgtcgat
    27481 ctgggcgcgg atgacctggt gttcatgacc atcggttcgc tgaccgagaa ttcagacaac
    27541 ggcgatcacc acacggcggc gcgcttgaat gaaggcccgg caccggcgtg ggacctgtgg
    27601 cggcgcatcg ccgcgaaaga tgcggtgttc gggcgcccgg atgtgttcgg tgcgcatatt
    27661 cccgagacca agtgggaatc ggcaacggtg accacgctgg atgcgcgcat tcccgcctac
    27721 atccagaaga ttgccaagcg cgacccgttc agtggcaagg tggtgaccgg cggcatcgtg
    27781 agtgtgcgcg actcgcgctg gctgatgagc tggacggtga accggcagcc gcatttcaag
    27841 aaccaaccca aggaccagat cgtggtgtgg gtgtattcgc tgttcgtgga tacgcccggc
    27901 gactacgtga agaagccgat gcaggattgc agcggcgagg agatcacccg cgagtggctg
    27961 taccacctgg gcgtgccgct ggacgagatc gacgaactgg ctgcgaccgg tgcgaagacg
    28021 gtgccggtga tgatgccgta cgtgaccgcg ttcttcatgc cgcgccaggc cggcgaccgc
    28081 ccggacgtgg tgccggaggg tgcggtgaac ttcgccttca tcggccagtt cgccgagtcg
    28141 aagcagcgcg actgcatctt caccaccgag tattcggtgc gcacgccgat ggaagcggtg
    28201 tacaccctgt tgggtatcga acgcggcgtg ccggaggtgt tcaattccac ctatgacgtg
    28261 cgttcgctgc tggcggcaac cggccgcctg cgcgatggca aggagctgga cattcccggg
    28321 ccggccttcc tgcgcaacct gctgatgaac aagctggaca agacgcagat tggtggcctg
    28381 ctgcgcgagt tcaagctggt gcaggaggac tgagccggcg ggagggtggc agccggtgaa
    28441 cgcatcggct gcccccacgc ttcacgcgat gccgtcggtg gagcggctga gctgttccca
    28501 ggcatcgatt gtgctggcca tcgacgccag cttcgcgcgc accagttgca acgcgtcgct
    28561 gcccagcagc aggtggctgg gtggcgcgtc gctgtcgatg atctgcagca tggcctgcgc
    28621 cgccttcagc gggtcgccca gctggtggcc actctttgcc tcgcgcgcgc tgcggatggg
    28681 gtcaaacagt gcgtcgtagt cttcaatgct gcgcggtgct cgtgccatcg agcgcccggc
    28741 ccagtcggtg cggaaggagc ccggtgcaac ggcggtgacg tggatgccga acgctgccac
    28801 ttccttgccc agcacttcac tgatgccttc cagcgcgaac ttgctgccgc agtaccaggc
    28861 gatgccgggc atggtgatga agccgcccat ggaggtgatg ttgaggatgt ggccacggcg
    28921 gcgcgcgcgc atgtgcggca gcaccgcctt gatcattgcg gccgggccga acacgttcac
    28981 ttcgaactga tggcgcaatt cggccagcgt ggattcttcg aggatgcctt cgtggccgta
    29041 gccggcattg ttgaccagcg cgtcgatggc gccgacgttt tcttcgatat cggcgacgag
    29101 cgcatcgatg gcatcggcat cggtcacgtc cagcaggcgg ccaaacgcgc ggccgggagc
    29161 cagcgcttcg aatgccacgc gcgcttcgcc gttgcgcacg gtaccgacca cgcggtggcc
    29221 ggcctgcagg gcctgctggg ccagggcgcg gccgaaacca ctgctgacgc cggtgatgag
    29281 gatgaggcgg gaggaggtca tggtgatcag gctcgttggg ggagggcttg cacgttagtg
    29341 cttgaaccga cggctaccca ggcctaggat tcgcccagtc ttgcctattc ctctggagtg
    29401 ctcgtgtccg tgatcgattc ccagcaggcg caaatgcagg cgcgcatggt cggcctgctg
    29461 cagaccctgg cagtcgagga gggctatacg ctcacgccgc tgcccggggt gcgcctgctg
    29521 cgctcgaacc ggccgctggc gcgcacgccg gtgctgtatg accccggcat cgtgatcgtc
    29581 tgccagggcg tgaagcgcgg ctatctgggc gggcaggtgt accagtacga cgcgcagcat
    29641 tacctggcgg tgtcggtgcc ggtgccgttc acgatggaaa ccgaggcctc ggaacaggcg
    29701 ccgctgctgg cgatctatct gcacctggac ctgcagctgg cagcggacct gatgatcgaa
    29761 ctgggcgagc aggccggtgt agggcaggta ccggcgcaga gcatgatgtc cagcccgatg
    29821 caggcgccga tgcaggccac ggtgctgcgc ctgctggaag cgttggccga tccgctggag
    29881 gcctcggtgc tggggccggc gctggtgcgt gagttgtact tccgcgtgtt gaccggcgca
    29941 cagggcgctg cgatgcgcga ggcgctggcc atgcgcgggc gcttcggcag catcggcaag
    30001 gcgctgcgca ccattcatgc ggcatatgcc acggccctgg atgtgggcca gctggcggcc
    30061 gaggcaggca tgagcgtggc gaccttccat gaccacttcc gcgcgattac cggtacgtcg
    30121 ccgatgcagt acgtgaagtc gacccggctg catcaggcgc ggctgctgat gcttcggcag
    30181 cgcatgacgg ccgaggccgc gtcgctggcg gtgggctacg ccagcccgtc gcagttcaac
    30241 cgcgagttca agcgcctgtt cgcgctgccg cccgcagccg aggtggcacg catgcggcgc
    30301 agttttgccg tgccgccggg gccggcaggg gcggtgtacg tgtcttcgca ttgaggggct
    30361 cggaacagga ccggcctggt ttgctgggat gccggccagc ggctggcact accggtgggg
    30421 tattgactgc gcgtctacct actagtaggt tacggcatat gaaagagccg ctctcgccca
    30481 aggccctgga gatcctgacc cacgcccgtt cgctgctgga ggccggcggc tacaacggct
    30541 tcagctatgc cgacgtgtcg gcgcgggtca acatcagcaa ggccagcatc caccaccatt
    30601 tccccagcaa ggcggacctg gtgcgcacgg tggtcgagct gtaccgggca gaagcgcgcg
    30661 aggggctggc gctgctggac cggcagctgg acgacccgtt gcaggaactc aacgcctacg
    30721 tggactactg gtcggcctgc atcgccggtg gcacgtcctc gttctgcatc tgcgcgatgc
    30781 tggcggccga gtcgccgatg attcctgcgg agattgccga ggaagtgcgc ggccatttcg
    30841 aggacctgag cggctggctg gcgctgaccc tgcagaaggg cgcggcaacg gggcagctgc
    30901 agctgcaggg ctccgcggcc gatgaggcca aggcattcat gtcggcggtg catggcgcga
    30961 tgctggccgc gcgcggtttc ggtgatgccg gcacgtttgc cacgctggcg cgcctggcga
    31021 ttgcgcgggt gagcaccgcc cgctgaaccc ggttgtcggg gcctgcgagg ttcgcgggcc
    31081 tttcttttga gcactaagcc tacctactag taggttcata aaatccagag gagtctaccc
    31141 atgtcacacg cactttccgc cctcggggtg atccacaccg ccgtgagcct ggttccggtg
    31201 cttgctggtc tgtatggctt catccgtcac cgcgccatcg acccggccac gcgttcgggc
    31261 aaggcctatc tggttggcct ggtgctgtcg gtggcgacct cgttcaccgt gtccagcacc
    31321 ggcgggctga atccgggcca cgccttcggc gtgatcgtgc tgctggccgc gttcggcggt
    31381 gtgctggccg ggcggctgca gttcctcggc cgcgcgcgac cgtatctgtc gaccttcggg
    31441 ctgtctttca gcttcctgct gtcgctggtg ccgggcgtga acgaaacgct gacccgggta
    31501 ccgctgtcgc acccgatcgc cgcggcaccg ctggcgccgg tgatcctgca gacgctgctg
    31561 gggtgtgccg tgctgtttgt gctcggcttc ctggcgcagt gctgggggat ccatgcacgc
    31621 gccgtacgta cgcgtggctg agaacgccag cgctgcggat caatcggaca gcacggcgtc
    31681 ggcatcatcg ccgtagccag cccgggcgct gccacaccgc gcgaaggtgg cagcgctggc
    31741 cggcaggccg gtggccttga tgccacgccg tgtgtcgccg tcgaacacct cggcatagcg
    31801 ctcggcggcc agcatgccgt cgggcagtac gtacagcaga acgcgctgca acgtggattg
    31861 gcccggcaac ggctgcgcct gccggaacgc aggcacctgc acacgcgcgc tgtgccactg
    31921 tgtcggcgca tcgacggttt gccagcgcac ctgcagcggc aggtcaagtg gcagcagcgc
    31981 gacgccggcc gggtagccat aggctgtgca atccgcaggc gccaccggga tgttctcgat
    32041 ggccctgtca ccgatgtcca gtgcgatgcc attggcttcc atccgcacga tgggcgcgct
    32101 gccatagttg tggatggtga acagcaccag gccctcgaag cggctgcgct gcagatcgtc
    32161 ggcagtggag ccgctgaggc gtgcgagcgt gggcgcgacc tccacatgat cgctgtagtg
    32221 gtagtagaga tgtacgagct ccggtgtgcc tgtgcggccc catccggtgt tgaagcgtgt
    32281 ggtgtccgga taaggctggc ggaccagtgg cacgtcggtg acggcgcgat ccccggacgg
    32341 cgtggcgtag cgatagtggt caacggaacg cttcaggcga ccctcttcat acgggaaggc
    32401 cctgtctgca tcggactgcg cgttggggta gcggtggaag gccacgaagt gcccgggcgt
    32461 gtcgccttgc atgggcaggt ccgggcctgt gccggagccg gtggacgcgt acggtgcggt
    32521 gtccagccac aggggctgcc cgctgagatt gatgtgccgc tcggcaattg ggtcacgcga
    32581 cccgcctgcc acggtggacc acgtgtgctg cagggactgc cacaggggaa tgatgagcat
    32641 ggccgcgacg gtcggcacga acatcaacgc atggacgcgg ccgggaacac gcccgcgctg
    32701 ccgcaccatg taacgcagcc aggccagcac gagcaccaac agcaatggta agccgaccca
    32761 gagtgcgatg gtggccagcg ccacgacacc ccagcccagg ttgggagtgg ccaccgcgat
    32821 gagcgagagc gtggcgatga gcgcggccaa caccagcgaa acgccgattc caacgcggta
    32881 ggtcctgtag gagctgtcgt tcatcaccgt tccatcggca gtgtggggcg tgcccctatc
    32941 ttgcagcggt gatgacggcg tggaaagtcg ggacagaggg cgctcagcag cccaccaggc
    33001 gatccgcacc gatgccgctg cgatgctggc tgcggtattc ggtggggctg gcgtcgacct
    33061 ggctgcggaa gtggcgccgg aaggattcct gcgaaccgaa tcctgcgtgc tcggcgatcc
    33121 attgcagcgg ccggtcggtg gtttccagca gctcgcgggc gaaggctacg cgctcgcgga
    33181 tcaaccagtc gatgggcgac aggccggtgg cgtccaggaa ctgtcgttgc agggtgcgct
    33241 ggctgagcgc ggcctgctcg gcgaggctgc cgagcgagtg cggctcgcgc aggttgcggc
    33301 gcatccattc catcagcttc gccaggcggc tgggctcgcc attgggaatg gcgcggctga
    33361 cgcgctggct gcgcccggca tcacgccacg gcgccagcac cagccgctcg gccaccaggt
    33421 tggccacgcg cgcgccgtaa tccttgcgca ccatgtgcag catcatgtcc atgccggtgg
    33481 ccgagccggc cgaggtgatg atgctgccgg catccacgta cagcacgtcc tcgcgcacat
    33541 cgacgcgggg gaagtcgcgt gcaagcgctt cggtgaggcg ccaatgggtg gtggcctggc
    33601 gcccatcgag caggccggcc caggccagca cgaacgcacc cgagcagatc gaggcgatgc
    33661 gtgcgccgcg cgcgtgggcg cggatgagcg catcgagcag tgcctgtggc gggcgctcgc
    33721 tgggttcgcg ccaaccgggg atgacgatga tgtcggcgtc atcgacgctg ccgagatcgt
    33781 agggcagctg cacctgggtg ttgccgagca tgcgcagtgc gccgggttcg cccgcgcaca
    33841 gctgggtgcg gtaccaggcc acgcccagtt ctggccgtac cggtgcgaac aggccgaccg
    33901 cacaaccgaa ctcgaacagc ccctggccgt ggcaggcgac gatggcgacc agtggcgcgt
    33961 tgggatcggc gggcagggtg ggcatggctt gatgctacgg gcggcagggc gcggcgctgc
    34021 gtggtgcgcg ggcatgaggt gatgcctgtg gggcatgtag cgctgcagac cgcgttgccg
    34081 cctaacgtca tgaccagcgg tcatgtgggt ggccggatgt tacggctggg tgacgcgatc
    34141 acgcctgtcg tggcggatga acacgctctt gaatggaggc gtg
//
LOCUS       DAOKIP010000023        33766 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.023,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000023 DAOKIP010000000
VERSION     DAOKIP010000023.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 33766)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 33766)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..33766
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.023"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..1370)
                     /locus_tag="QEL58_000994"
     CDS             complement(<1..1370)
                     /locus_tag="QEL58_000994"
                     /EC_number="6.1.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014647791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine--tRNA ligase"
                     /protein_id="HDS1675496.1"
                     /translation="MTLRLHNNLTRQLEPFTPLDPACPTLYVCGPTVYNYVHIGNARG
                     PVVFGVLADLLRRRFGALRYARNITDVDDKINTAAREQGVPISTITDRFAAAYREDMA
                     ALGVVPPDIEPEVTAHMPQIVTMIEQLIASGHAYAAEGHVLFAVASFNGYGKLSRRDP
                     EEMLAGARVDVAPYKRDPGDFVLWKPSSDDLPGWESPWGRGRPGWHIECSAMAAAHLG
                     ETIDIHAGGVDLQFPHHENEIAQSECAHGGKIFARFWLHNGMLNFGGAKMSKSLGNIE
                     RVHDLVRQHPPEALRLALLSAHYRQPLDWSDGLIEQSVRTLDRLYGTLRELASIEASA
                     VIPASVEATLDDDLNTPQALAEVARIAADARRATDPAEQARLKGELLGAGLALGLLQA
                     DPAQWFGTAAGDDGDDARIQGLIDERAAAKQARDFARSDAIRDQLAAEGIVLEDTPQG
                     VRWSRKR"
     gene            1557..2120
                     /locus_tag="QEL58_000995"
     CDS             1557..2120
                     /locus_tag="QEL58_000995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014647790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675497.1"
                     /translation="MKSTALLTLACLSALPAVVLAQEAEPRNRVVIVENVKFDYAQVL
                     NVEPVFQTLRATRTEEHCEPVSTRTLAPVNVTGEEPVEDKGRISRFWDSVRSMFKRSD
                     DEASEEVAAETPAPAPANNGPMLTRDCRIVPVGREFRRPIAYDVDYVYKGTKYRSRLP
                     EDPGNRLKIRVSITPWVGPEQGTASNP"
     gene            2440..3450
                     /locus_tag="QEL58_000996"
     CDS             2440..3450
                     /locus_tag="QEL58_000996"
                     /EC_number="2.1.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014503633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylornithine carbamoyltransferase"
                     /protein_id="HDS1675498.1"
                     /translation="MSPKHFLNTQDWSRSDLDALLTQAALFKRNKLGDQLKGKSIALV
                     FFNPSMRTRTSFELGAFQLGAHAVVLQPGKDAWPIEFNLGTVMDGDTEEHIAEVAKVL
                     GRYCDIIAVRAFPKFQDWAYDRQDIVLNSFAKYSPVPVINMETITHPCQELAHVMALQ
                     EHFGTQDLRGKKYVLTWTYHPKPLNTAVANSALTIATRMGMDVTLLCPTADYILDERY
                     MGWAEQNVAESGGSLKISHDIDSAYAGADVVYAKSWGALPFFGNWEPEKPIRDQFKHF
                     IVDERKMALTNNGVFSHCLPLRRNVKATDAVMDSPQCIAINEAENRLHVQKAIMAAVA
                     GR"
     gene            3569..4762
                     /locus_tag="QEL58_000997"
     CDS             3569..4762
                     /locus_tag="QEL58_000997"
                     /EC_number="6.3.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011037391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate synthase"
                     /protein_id="HDS1675499.1"
                     /translation="MSNKDVVLAFSGGLDTSFCVPYLQERGYNVHTVFADTGGVDDEE
                     RDFIEKRAAELGVTSHVTVNGGPAIWEGFVKPFVWAGEGYQGQYPLLVSDRYLIVDAA
                     LKRAAELGTNIIAHGCTGMGNDQVRFDLAVKALGDYQIIAPIREIQKEHTQTRAYEQK
                     YLEERGFGVRAKQQAYTINENLLGVTMSGGEIDRWEAPGEGARGWCSPRSEWPEQALT
                     VTLKFVEGEAVELNGKALPGDQILAQLNKLFAPYGVGRGVYTGDTVIGLKGRIVFEAP
                     GLVSLLAAHRALEDAVLTKQQNRFKPDVARKWVELVYEGFYHDPLKTDIEAFLKSSQA
                     KVNGEVVLETRGGRVDAVAVKSPHLLNTKGATYAQSADWGVEEAEGFIKLFGMSSTLY
                     AQVNR"
     gene            4895..5983
                     /locus_tag="QEL58_000998"
     CDS             4895..5983
                     /locus_tag="QEL58_000998"
                     /EC_number="3.5.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetylornithine deacetylase"
                     /protein_id="HDS1675500.1"
                     /translation="MLEQTLDHLQALVSFDTRNPPRAITTGGIFDYLRANLPGFNVEV
                     IDHGAGAVSLYAVRGTPKYLFNVHLDTVPDSPHWSADPHVMRRLDDRVVGLGVCDIKG
                     AAAALVAAANASEGDAAFLFSSDEEANDPRCIAAFLARGLPYEAVLVAEPTMSEAVLA
                     HRGISSVLMQFAGRAGHASGKQDAAASALHQAMRWGNRALDHVESLASARFGGLTGLR
                     FNIGRVEGGIKANMIAPAAEVRFGFRPLPSMDIDGLLATFAGFAEPQAALFTETFRGP
                     SLPAGDIAEAENRRLLARDVADALELPIGNAVDFWTEASLFSAAGYTTLVFGPGDIAQ
                     AHTADEFVTLDQLQRYTDAVHRIIAAGA"
     gene            6009..7337
                     /locus_tag="QEL58_000999"
     CDS             6009..7337
                     /locus_tag="QEL58_000999"
                     /EC_number="2.7.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017174254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetylglutamate kinase"
                     /protein_id="HDS1675501.1"
                     /translation="MSPALQPHRQTRQTIVRLLSSMASAKEISQYLKRFSQLDAKRFA
                     VVKVGGAVLRDDLDALTSSLSFLQEVGLTPIVLHGAGPQLDAELSAAGIEKQTVNGLR
                     VTSPEALAIVRRVFQQSNLRLVEALQQNGARATSITGGVFEAEYLDVDTYGLVGEVKK
                     VNLAPIEASLRAGSIPVITSLGETAGGQILNVNADFAANELVQELQPYKIIFLTGTGG
                     LLDEAGNVIDSINLSTEYDHLIAQPWIHGGMKVKIEQIKDLLDRLPLESSVSITRPAD
                     LAKELFTHKGSGTLVRKGEKVLRATAWEQLDLPRLKQLIESSFGRTLVPDYFEKTRLL
                     RAYVSENYRTAVILTDEAEGVYLDKFAVLDDAQGEGLGRAVWNVMLEETPQLFWRSRH
                     GNPINHFYYAESDGCYKQDHWKVFWFGADGIDRIKTYVDHCAQRTPSLQG"
     gene            7341..7943
                     /locus_tag="QEL58_001000"
     CDS             7341..7943
                     /locus_tag="QEL58_001000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010486646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDS1675502.1"
                     /translation="MNNPDVWNTVPTLRGQHVLLQPLQLEHVPGLRAALEGSGLDQLW
                     YTQVPSPEQAEAYVQAALQAQAEGKGLPFVIRDAAGDIIGSTRFYDMDASVPKLSLGY
                     TWYTPRAQRTGANTEAKLLLLQHAFEVLGCISVVLETSWFNATSRTAIARLGAKQDGV
                     LRNHKRHADGTPRDTVIFSIIDAEWQGVKRHLQYRLDRHA"
     gene            7940..8893
                     /locus_tag="QEL58_001001"
     CDS             7940..8893
                     /locus_tag="QEL58_001001"
                     /EC_number="1.2.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-gamma-glutamyl-phosphate reductase"
                     /protein_id="HDS1675503.1"
                     /translation="MNDSTFTLGIVGARGHTGAELIKLVAAHPRLKLAFVSSRERAGQ
                     RLSDHHPEFQGDLQYESLDADAVAAKGVDAVILALPNGLAAPFVAALEAARPETVIVD
                     LSADYRFDNSWYYGLPELTRNRYNGQKHISNPGCYATAMQLAVHPLLDLLAGPPQCFG
                     VSGYSGAGTTPSDKNNVELLADNLMPYALTNHVHEREVSVQLGVAVEFMPHVAPHFRG
                     ITLTANLWLNRVQTREQIVERFQQAYAGEPLIEVVDEAPWVSRIAGRHGAQVGGFTLA
                     PGGKRVVVVATLDNLLKGAATQAMQNLNLALGIDELTSIPH"
     gene            8915..10210
                     /gene="argH"
                     /locus_tag="QEL58_001002"
     CDS             8915..10210
                     /gene="argH"
                     /locus_tag="QEL58_001002"
                     /EC_number="4.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014647782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate lyase"
                     /protein_id="HDS1675504.1"
                     /translation="MADLLWQKPGVAVDAQIQTFLAGDDVILDREFFLHDIAASAAHA
                     QGLQHIGILSADELAGLLRELEVLAQDFRDGRFVLDTQYEDGHSAIEARLTERLGDAG
                     RKIHTGRSRNDQILVATRLWLKEKLQRVARISAEVAKVALDRAQAEKDLPIPGYTHIQ
                     RAVVSSAGMWWAGWAEAFIDNAIRARDTHALVDANPLGTAAGYGVNLPLDREHTTAAL
                     GFARMQISPIYAQLSRGKFELAALEALGGATLDLRRIAWDLSLFTSAEFGFVALPAQY
                     TTGSSIMPNKRNPDVIELMRATHASVAAARTEIEQLLSLPSGYHRDLQSSKGAIFHGF
                     GRGLSALELLPALLANLEWRDDKVRAAIDSGMYATDVAVEAAVAGVPFREAYKAAAAG
                     ADSAGQGRTPEGSLAARVSPGSAADLRLDELRARWQALA"
     gene            10210..10473
                     /locus_tag="QEL58_001003"
     CDS             10210..10473
                     /locus_tag="QEL58_001003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675505.1"
                     /translation="MAGTVYLVLAMRRADFNAAAVQPHRDFLDALQAQGKLQLTGGFA
                     DGSGGAYVLCNVESLEEAQAIVATDPLVTMHASELTVHEWTTR"
     gene            10485..11642
                     /gene="proB"
                     /locus_tag="QEL58_001004"
     CDS             10485..11642
                     /gene="proB"
                     /locus_tag="QEL58_001004"
                     /EC_number="2.7.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012511639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate 5-kinase"
                     /protein_id="HDS1675506.1"
                     /translation="MTLHAAAVASPFPEQALPPWRRAVLKVGSSLLAADGGGLSPRHA
                     LGLAQFVSANVLAGREVVIVSSGAVAAGRAILPRADEPGAAMAARQALAALGQAQLIG
                     LWQRFFERPVAQVLLTHDDLRNRRRYLNARATLSELLRLGALPVVNENDTVSVDELKL
                     GDNDNLAATVAALVDADALFIATDIDGLYSADPRTAADARPLHDVPELDEAVLAMAGG
                     AGSRAGTGGMRTKLEAAAKAGRLGIETYLFNGRSGDVVRALAQDRLHGTRIHAARSRE
                     AARKHWLRHAPLAEGAIIIDAGAAQAMREKGASLLPGGITGAEGAFRRGDMVQVCWNA
                     PQGRVCVARGVSQYAADDVRRIAGRHSRDIQALLGYNYGGSVVHRDDLVLP"
     gene            11639..12910
                     /locus_tag="QEL58_001005"
     CDS             11639..12910
                     /locus_tag="QEL58_001005"
                     /EC_number="1.2.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-5-semialdehyde dehydrogenase"
                     /protein_id="HDS1675507.1"
                     /translation="MTGLKDTPMSGIETQARACRDAALVVAGLDSAARRSLLLAMAQA
                     LEVNAGLILAGNARDLAAAREKGVGAAMLDRLALDPPRLFAMAEAVREVAGLPDPVGQ
                     VTRNDVRPNGIRVQKVRVPLGVIAMIYEARPNVTAEAAALCLKAGNGVILRGGSEAIH
                     SNTAIAHALAGALQANGVPPAAVTVLTDLRREAMLELLQLHELIDLAIPRGGEGLIRF
                     VAEHARVPVIKHYKGVCHLFVDASADLDKAIDLLVDGKCSRPAACNSLETLLVHGDVA
                     DAFLPRVARALGERGVQLRADERAQPQLPGSRAATDEDYAAEFLDLVLAVRVVDDLDA
                     AIAHIRRYTSDHTEVIATEDSGNAERFVNALRSAVVMVNASSRFSDGGQLGLGSEIGI
                     STTRLHAYGPMGLEALTVERFVVRGEGQTRK"
     gene            complement(13049..13519)
                     /gene="pgaD"
                     /locus_tag="QEL58_001006"
     CDS             complement(13049..13519)
                     /gene="pgaD"
                     /locus_tag="QEL58_001006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="poly-beta-1,6-N-acetyl-D-glucosamine
                     biosynthesis protein PgaD"
                     /protein_id="HDS1675508.1"
                     /translation="MNAQRPSNRFDSRTIRKPHRQPRFQRTAWGFVTLAFWGFYFYLW
                     APLVTLLSWLIGGQLAWQQLYERQNQLDPYVLVALPLMLLCASVLLIGWAEYNRARFR
                     GHDRRLPRPLASLNEVAADLGASTGLAERLMGCKAATLHMDEHARPIGIRREVV"
     gene            complement(13516..14772)
                     /gene="pgaC"
                     /locus_tag="QEL58_001007"
     CDS             complement(13516..14772)
                     /gene="pgaC"
                     /locus_tag="QEL58_001007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014647777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="poly-beta-1,6 N-acetyl-D-glucosamine synthase"
                     /protein_id="HDS1675509.1"
                     /translation="MDMHPMLLILFQFAFYYPMVMAFFWMSGGLYYYFRRERHSRPRN
                     DPPLMVDPPFATLLIPCHNESENLDDTLGAALAQRYPADYEVIAIDDGSSDDTGIRLD
                     ALAARHPRLRVLHLDRNLGKANALRMGALAARSEYLVCIDGDAMLEEHALHWMVWHLA
                     SGSRVGAVTGNPRIRNRSTLLGRLQVAEFSSIIGMIKRAQRVYGRIFTISGVIAGFRR
                     TALHQVGWWSDDMVTEDIDISWRLQHAHWDIRYEPNALCFILMPETLKGLWRQRLRWA
                     QGGVEVMLRHARSLLHWKERRMWGVLLEYVLSVVWAYTMLFIVLLWALGKFIELPPQL
                     HIVSLLPEWHGVILALVCLLQFASSLIIDRRYETQIGRNYFWVIWYPMAYWLISLSTT
                     LVALPKTLLRRRRKRATWTSPDRGIR"
     gene            complement(14774..16660)
                     /gene="pgaB"
                     /locus_tag="QEL58_001008"
     CDS             complement(14774..16660)
                     /gene="pgaB"
                     /locus_tag="QEL58_001008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014647776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="poly-beta-1,6-N-acetyl-D-glucosamine
                     N-deacetylase PgaB"
                     /protein_id="HDS1675510.1"
                     /translation="MARILRLIVLLLLAIAPPAFAQQALHLDAIDNGLLILSYHDIRD
                     QVAAKGDADTYAVSTQNFAAHLDWLGAHGYHPVSLSQVIEASQGRTTLPPKPVLLTFD
                     DGLRSVYDKAFPLLQAYRYPALVAVITDYVDMAPGRTIDYGYRPFGRDDFVTWAQLKQ
                     MHDSGLIEVASHTDDLHHGVLANPQGNSTPAVVTRVYSPATHSYESEAQYEQRLRADL
                     SRSVQRIEQHLGVRPRAIVWPYAAYNQLSNDIAEQLGMPVSFDLEGRSTPVASDLHGL
                     ARFLVSDNPTVEGLAYELRRDVALDGIRALQIDLDDVYDPDPAQQARNLDALIERVKR
                     IAPTHVYLQAFADPDGNNTADALYFPNRHMPMRADLFSRVAWQLKSRAGVKVYAWLPV
                     LGFELPDPVLRKALAIRNGDADGMYRLDFTNPKARQIMLDIYEDLAVNSYFEGLLFHD
                     DGYLRDTELPALSSGDGGSARTHALIDFTLALRDSAQRWRPKLATVRNLYAEPVLRPQ
                     SEAWFAQRLDLFNKAYDQTALMAMPWMEGSKHPERWLDQLLAAVRSHDPQLQHTLFEL
                     QTVDWNSGQPIPAERLRAQIRQLQAQGVHHFAWYPDDFIADQPSTHDARAAMSAGNFP
                     YPEK"
     gene            complement(16662..18689)
                     /gene="pgaA"
                     /locus_tag="QEL58_001009"
     CDS             complement(16662..18689)
                     /gene="pgaA"
                     /locus_tag="QEL58_001009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014647775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="poly-beta-1,6 N-acetyl-D-glucosamine export
                     porin PgaA"
                     /protein_id="HDS1675511.1"
                     /translation="MVVHRRLALCVGLACTALAWASSAAPPDREAALAEIGRYRDQAR
                     WLDALGAIERASQQQPNDDLLFKLRVLTLGDIGNAWRAWELYQQRPQLFDAAQKQRLE
                     GDYLAKLVVWSLAYSSSEDSRLEEAESTLARMQRYLGGEGTPPAQAPLRIRMDRLILL
                     NRLGRHAQVREEARALQAEGHTLPDYVLPAVGDSLMGTLHPQEAIPVLQAAVAGDPTR
                     DASHSELAYAYLESEQQEKAIDLLQAWRDKEPAWRWSNGKSPYPNWSRYEADLNLAMV
                     RAYSGDLRTAQHDLESMVDIAPGNGGLQSALGSVYMMRGWPRRALQRQQMAHALDPRD
                     IEARLGMEEAYVALQRDDLARPLHDDLIARYPTQPAVERMDQAWRAHRGWQLKAWTDI
                     GRSSGGGGTSPLGNNDRHYGVEVESPMLDDRWRLFAFADRRSIDFQDQRIDPLWLGAG
                     VRYRFGRLDAEAAALRANDHIGDTGLRVGVGWQFNDYWHAGLVAARNDPEASMQARVA
                     GITADSVSAQVDYRRSELTHWMFGASRFRYDDGNHRELVSTGLEQRLLTRPRWLVDGL
                     ASAYASRGSRDDAPYFNPKRDRMVEIGLRIDQQLWRHYERHFRHRLTVSLGDYWQDGF
                     GSALVPSVSYMHEWQLGPGRVFEYGVRWSRPVYDGHRERHIGFEAALRWGD"
     gene            complement(19031..20236)
                     /locus_tag="QEL58_001010"
     CDS             complement(19031..20236)
                     /locus_tag="QEL58_001010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDS1675512.1"
                     /translation="MSSSPSDSPSLLHGRVLAFAAILLAAINLRTAVTSITPLLDVLG
                     QQFGFGTTMTGVLGMLPTASFALFGVATPALARRLGLERTTLLAMVMAMAGLLLRSSA
                     GNVGTLLFGSVLALAGMGIGNVVVPPLVKRYFANKVGTMSTLYISVLQLGTMLPALLA
                     VPVANAAGWRVSLGMWALLALAAALPWLVLATRAPKPQADATDPTAQPHGKVWRTSLG
                     WSMTLMFGMTSLMTYSMFTWLPRIVVEAGGTPAFGGVMVAVFSALGLLPSLVIPSMAV
                     RLQNPFPLVLIGFFSFVIAFTGLLLAPMKAPLLWACLLGVGPSTFPLALTMINLRTRT
                     PTGSAALSGFMQGVGYSFSCLGPFLVGWLHTVSDGWTLPFSFLFGCATLMLCASWVAC
                     KPRKLEDLW"
     gene            20561..20983
                     /locus_tag="QEL58_001011"
     CDS             20561..20983
                     /locus_tag="QEL58_001011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009610413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAAR domain-containing protein"
                     /protein_id="HDS1675513.1"
                     /translation="MARTLIVVGDATTGGGRVICGSPVTDIEGMPVARVGDKATCPKH
                     QRVATIVSGDITLTFEGQPVARHGDRLSCGCSLIAGKQFRVYVDMGGGGGGADGVWPA
                     AAASDLGPLPVALQAAKEPVCEECLLAASRSGAPFLGR"
     gene            20984..21454
                     /locus_tag="QEL58_001012"
     CDS             20984..21454
                     /locus_tag="QEL58_001012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019302534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4123 domain-containing protein"
                     /protein_id="HDS1675514.1"
                     /translation="MNRYVIVDAAAYADTPKALAWYAQDLPHRSLLARQPEAAHASVG
                     PWLLQLPAQSHTQVDGWLRALELDKPVVAWLRSEVGFEAVFQHLEACLDLRRPNGTLA
                     LLRYWDGRVFLRLQRAFTLQQRRQLMGPLRQWRFQMLGQHYALERDALYAAETG"
     gene            21454..21789
                     /locus_tag="QEL58_001013"
     CDS             21454..21789
                     /locus_tag="QEL58_001013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011260740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675515.1"
                     /translation="MFEINEEQEALLRLPDPSTFFPLLCREIREEYPGSVGHLSDGAL
                     MDEVVRSHDHAAYVLRITHLPVLVRWVKADVAWARGLRAVPAADMWMRSAENPNLAAA
                     DLLSNLAGH"
     gene            21843..22685
                     /locus_tag="QEL58_001014"
     CDS             21843..22685
                     /locus_tag="QEL58_001014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014501329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675516.1"
                     /translation="MGAGNGGVDEDGNPVEPYGGPTTGDVADGIRDVVGDIQQRVRGK
                     AKPDARAEPTAKAREVDCSQMPDETACNECLLKEGFIGPPRTGRYVTQRNLINYEYQL
                     YIANLRSAPLRFGFMVADKADPARTFFSVDTLFDYLHRKGFSRTVQEWHFNACEFDGF
                     WLKDCTVVEAKGRYEHFLDEEEQPKYRFVVPSVFQPWREQMIRQRAAIAIAEPQGRLI
                     WCFMQGRAMAAAIEFARLDPLICRYEPFRGGAVYDHTSSSRSVDSACREISARSAAIG
                     CGDN"
     gene            22711..23346
                     /locus_tag="QEL58_001015"
     CDS             22711..23346
                     /locus_tag="QEL58_001015"
                     /inference="COORDINATES: protein motif:HMM:NF026917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="immunity 52 family protein"
                     /protein_id="HDS1675517.1"
                     /translation="MKGWYALPSSQKEKTLSLNDSEELLTRMERDVEKRRQRFGDYAE
                     LGASLSLANVDNDRDWRKPGVVVLQLDPTTGFNAFSIEGLEPFGDATSLLVLNVLIEL
                     VEALRPTFACTNVKARTPEKGLVTYQMSRRLYQHRQFFGWMGFVPAQITHTQIRDAHA
                     VHPVDGLGTVIVSVPGVFDPTDDAQVDKVHRVEMDLASYDLLPVTDPNLKG"
     gene            23560..24312
                     /locus_tag="QEL58_001016"
     CDS             23560..24312
                     /locus_tag="QEL58_001016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014501329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675518.1"
                     /translation="MGGGNGSVDEDGNPVDPYGGPTTGDVADGIRDVVGDIQQRVRGK
                     AKPDARAEPTAKAREVDCSQMPDETACNECLLKEGFIGPPRTGRYVTRRNLINYEYQL
                     YIANLRSAPLRFGFMVADKADPARTFFSVDTLFDYLHRKGFSRTVQEWHFNACEFDGF
                     WLKDCTVVEAKGRYDHFLNEAGLPRYEFVEHGVFRPWGVQMNRQRGAIGVAGRQAKLL
                     WCFMQHRTMAAAIETEYVDPMLCRHIPFRGDI"
     gene            24312..25061
                     /locus_tag="QEL58_001017"
     CDS             24312..25061
                     /locus_tag="QEL58_001017"
                     /inference="COORDINATES: protein motif:HMM:NF026917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="immunity 52 family protein"
                     /protein_id="HDS1675519.1"
                     /translation="MIVSAQTNMRTDPVSRTPDQLLSLAVQATQRLAPLHPLMARWYA
                     LPSNAKEKSIPFENTGAILARMERNIEKDRDRFGDFDELGASLLLANVDNDRDWRTPG
                     LVVLGLDPTLGSHKFRLVGIEPFGEAAPNLMLNAMIGLVKEVKPRYACTDVKAMTHEK
                     ALVTYQLDRRLYQHRRYFGWMGFVPAQITHAQIRDAHAVHPVDGLGTVIVSVPGVFDP
                     TDDAQVDKVHRVEMDLASYDLLPVTDPHFKG"
     gene            25130..25879
                     /locus_tag="QEL58_001018"
     CDS             25130..25879
                     /locus_tag="QEL58_001018"
                     /inference="COORDINATES: protein motif:HMM:NF026917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="immunity 52 family protein"
                     /protein_id="HDS1675520.1"
                     /translation="MIIRAQESLWTTPVSRSPDEVLSLASLTVQGLALLHPSLRRWYA
                     LPSSPKEECISLDDSSALLFRMEQDVGKDRRRFGDFETLGASLTLANVDNDRDWRKPG
                     LAVLDLNPTTGFNSFSLVRPEPFGEAIPSLMVNALIGLVKTIRPSFACVDVKSRTPEK
                     GLVTYQIDRRLYQHREFFGWMGFVPAQITHAQIRDAHAVHPVDGLGTVIVSVPGVFDP
                     TDDAQVERVHRLERDLASYNLLPVTDPHFKG"
     gene            26364..26717
                     /locus_tag="QEL58_001019"
     CDS             26364..26717
                     /locus_tag="QEL58_001019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019338371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675521.1"
                     /translation="MKTSDTSFPPTGHAPANADVAGEPITFVAQLCGIDSGGASDGRP
                     WPERQLNPGRCMALADADCALAGLRTVHAILLAAERARQDGGPDQDVGDHVIEGLIQA
                     SRALGLYAGLNVRPC"
     gene            complement(26849..26925)
                     /locus_tag="QEL58_001020"
     tRNA            complement(26849..26925)
                     /locus_tag="QEL58_001020"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(26889..26891),aa:Pro,seq:cgg)
     gene            complement(27066..27142)
                     /locus_tag="QEL58_001021"
     tRNA            complement(27066..27142)
                     /locus_tag="QEL58_001021"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(27106..27108),aa:Pro,seq:cgg)
     gene            complement(27198..27314)
                     /gene="cydX"
                     /locus_tag="QEL58_001022"
     CDS             complement(27198..27314)
                     /gene="cydX"
                     /locus_tag="QEL58_001022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome bd-I oxidase subunit CydX"
                     /protein_id="HDS1675522.1"
                     /translation="MWYFAWILGAGLASTVAILNGMWFEAREQNRIEKENRH"
     gene            complement(27371..28522)
                     /gene="cydB"
                     /locus_tag="QEL58_001023"
     CDS             complement(27371..28522)
                     /gene="cydB"
                     /locus_tag="QEL58_001023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011347694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome d ubiquinol oxidase subunit II"
                     /protein_id="HDS1675523.1"
                     /translation="MDFILLDYTTLRVIWWLLLGILLIGFAVMDGFDLGVGTLLPFVA
                     RNDAERRLVINTIGPVWEGNQVWLVLGGGAIFAAWPPLYAVSFSGFYLAMFVILFALI
                     LRPVGFKFRSKMPSERWRNTWDWALFIGGFIPALIMGVAVGNVVLGVPFHFDDSMRIF
                     YTGSFFGLLMPFALLAGLLSVSMLVAHGAAMLVIKTDGPVAERAARFGSIAAIIAFVL
                     FAVGGAWVAFGLPGYQITSQVVTDGATNPLLKTAELGAAGGWMRNYSTMPATILAPLL
                     GLAGLLASAVLLRARRGGLAFIASGAAIAGIILTVGFAIFPFLLPSSSQPTSSLTVWD
                     ASSSHLTLWIMLLATAVFLPIILAYTTWVYRVLKGKTTSEEMGNNPNAY"
     gene            complement(28538..30127)
                     /locus_tag="QEL58_001024"
     CDS             complement(28538..30127)
                     /locus_tag="QEL58_001024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome ubiquinol oxidase subunit I"
                     /protein_id="HDS1675524.1"
                     /translation="MIDQTVVELSRLQFALTAMYHFLFVPLTLGLSFMVAIMESVYVM
                     TGKEIWRRMTLFWGVLFGINFAMGVATGIVMEFQFGMNWSYYSHYVGDIFGAPLAIEG
                     LMAFFLEATFVGLFFFGWNRLSKVKHLMVTWLMALGTNLSAIWILIANGWMQNPTGAV
                     FNPETMRMEVVDFMAVVFNPVAQAKFVHTVSAGYVTGAVFVMAISALFLLRNKHKDLA
                     RRSFAVAAAFGLLSSLSVVVLGDESGYAASEHQKMKLAAIEAMWETERAPADFTAFGI
                     PNQQTHQNDYAVKIPYLMGLIATRSLNQPIPGILELVERAEHRVRGGQLAYGALERLR
                     ANKNDVEAREMFDRHWQDLGHGLLLKRYRDDILNATPQEISQAAMDTVPRVMPLFWTF
                     RVMAGLGFYLIAFFALAFYYSCRNNFQDKRWFLKVALWTLPAPWIAIECGWFVAEYGR
                     QPWAVDGVLPTFYAASGLALHEIVLTLAGFTAIYTALIVVEIKLMLKAIRKGPDEVLP
                     SLQSPQPHASHNASAPVAGQA"
     gene            30356..32101
                     /gene="cydD"
                     /locus_tag="QEL58_001025"
     CDS             30356..32101
                     /gene="cydD"
                     /locus_tag="QEL58_001025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005413996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol reductant ABC exporter subunit CydD"
                     /protein_id="HDS1675525.1"
                     /translation="MSAAETTPDGLSQEAETTRQRRARTAWLADLARPARGRQRLAAL
                     CISLSGALLIGQAAAIAWLVQQVLVERAPLASGLPVLGGLALILVLRTLLGSATQAAA
                     GDVADAARLALRERVFARLLGHGPLWLRQRRTGELGELVLHHGDAIENYYSGFLPVRT
                     EVVVVPLLILAAVAWVDWVVALILLFTAPLVPFFMMLVGWGAEAAGRAQLGELARMSG
                     HFADRIKGLGVLRLYGRGEAELAGVEAAAEGVRLRTLKVLRIAFLSSTVLEFFASVSV
                     AMVALYLGLSYLGMMSLHAAVPTLGAGLFCLLLAPEFYAPLRRLAAHYHDRANALAAA
                     AEVERLLQSLPDEQGLLDNEGAALVVEPAEAALPPLRAQGLVLRPLGAPHDVLQDLDV
                     LLEPGQRLALVGPSGSGKSTLLEALAGWLPPRAGKLQLRPGVQVAYASQRPYLFHGSI
                     ADNLRLADPGASDARLRAVAEAAQVLQFAQRLPQGLDTVIGERGFGLSGGEARRIGLA
                     RLLLRDPQVLLLDEPTAFLDADTEAALLRSLAAYARGRSVVVATHSPAVIAWADRCLL
                     LPEGRLVEPAQAVRA"
     gene            32098..>33766
                     /gene="cydC"
                     /locus_tag="QEL58_001026"
     CDS             32098..>33766
                     /gene="cydC"
                     /locus_tag="QEL58_001026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005413995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol reductant ABC exporter subunit CydC"
                     /protein_id="HDS1675526.1"
                     /translation="MSRSPDSLRAVFLRHRPRLLLTMLLLWTTMLAGTALLGLSGGFL
                     TAAALAGAAGLGQGFNFFSPSAGIRGLTMARIVSRYFEKLVGHDATLRIARDLRVWFF
                     RRALPLAPARLGATRTGDLLARLLGDIGEVDGLLVRAIGPLVALGALSLVAVVSAALI
                     LPSAAVLLAVLALLIAVGVPWLGVRGRDDEEADRAAHRAALRTAAFEGLEGAGDLAAL
                     HADAAWQLKVRVAAKQLASRDRRRRWRLIAGSTLHGLVAGLGLVAMLALALHAAEQQR
                     IAPEMAAGLVFLTVALIELWAGMGLAWQSLQSGRIAADRLQAIVEQSPTVEDPSTPHA
                     VPQAARVHWDDVHFQWPGAARPVLSGLQLTLAPGERIAIRGDSGSGKTTLSSLLLRLW
                     DPQQGRITYGGRDLRDFAQAEWHRQLAWLPQNAPVFAGTVAENLRLGDPDASDVELWA
                     VLRRVRLAEWAERNGGLQAWVGENGATMSAGQARRLALARALLRNAPILLLDEPTEGL
                     DVDTARALLQDLSGLLDGRSLLMITHDDLPDGVVDAQYRLRDGVLERE"
BASE COUNT         5735 a        10862 c        11432 g         5737 t
ORIGIN      
        1 cgcttgcgcg accagcgcac gccctgcggg gtgtcttcaa gcacgatgcc ttcggcggcc
       61 agctggtcgc ggatggcatc ggagcgggcg aagtcgcgcg cctgcttggc cgcggcgcgc
      121 tcgtcgatca gaccctggat gcgcgcatcg tcgccgtcat cgccggcggc agtgccgaac
      181 cactgcgccg gatcggcctg cagcaggccc agcgccaggc ccgcgccgag cagttcgccc
      241 ttcaggcgcg cctgttcggc cggatcggta gctcgacgtg catcggcggc gatgcgggcc
      301 acttcggcca gcgcctgcgg ggtgttcagg tcgtcgtcca gggtcgcctc tacggaggcc
      361 gggatcaccg cgctggcctc gatcgacgcc agttcgcgca gggtgccgta caggcggtcc
      421 agggtgcgca ccgattgctc gatcaggcca tcggaccagt ccagcggctg ccggtaatgg
      481 gccgacagca gggccaggcg cagcgcttcc ggcggatgct ggcgcaccag gtcgtgcacg
      541 cgttcgatgt tgcccagcga tttgctcatc ttggcgccgc cgaagttgag catgccgttg
      601 tgcagccaga agcgcgcgaa gatcttgccg ccgtgggcgc attcgctctg cgcgatctcg
      661 ttctcgtggt gcgggaactg caggtcgacg ccgccggcgt ggatgtcgat ggtctcgccc
      721 aggtgcgcgg cggccatcgc cgagcactcg atgtgccagc ccgggcgccc gcggccccac
      781 ggcgattccc agccgggcag gtcgtcgctg gacggcttcc acagcacgaa gtcgccgggg
      841 tcgcgcttgt acggggccac gtcgacgcgg gcaccggcca gcatctcttc cgggtcgcgg
      901 cgcgagagct tgccgtagcc gttgaagctg gccaccgcga atagtacgtg gccttcggcg
      961 gcgtaggcat ggccgctggc gatcagctgc tcgatcatgg tgacgatctg cggcatgtgc
     1021 gcggtcactt ccggctcgat gtccggcggc accacgccca gcgcggccat gtcttcacgg
     1081 taggcggcgg cgaagcggtc ggtgatggtg ctgatcggca ccccctgttc gcgcgcggcg
     1141 gtgttgatct tgtcgtcgac gtcggtgatg ttgcgggcgt agcgcagtgc gccgaagcgc
     1201 cgccgcagca ggtcggccag caccccgaac accaccgggc cacgggcgtt gccgatgtgc
     1261 acgtagttgt agaccgtcgg gccgcacaca tacagggtcg gacaggccgg atcgagcggg
     1321 gtgaacggtt cgagctggcg agtcaggttg ttgtgcaggc gcagggtcat ggggctgtgg
     1381 ctgggggaca agcctgcgat tttagaacgt gtcggcccct ttgggggcac tggctgccac
     1441 cggtggacgc gggttctccc aaggtggggt gggcaggagc ggcgtggacg ggtaatgttc
     1501 agccccttgc gctcgtcact gcctacacta ttgccgtgtc cttgctccca tcgccaatga
     1561 aatccaccgc gttgctgacc ctggcctgcc tgtcggcgct gcccgccgtg gtgctggcgc
     1621 aggaggccga gccccgcaac cgggtggtga tcgtggagaa cgtgaagttc gactatgccc
     1681 aggtgctgaa cgtcgagccg gtgttccaga ccctgcgcgc gacccgcact gaggagcact
     1741 gcgagccggt ctcgacccgg accctggccc cggtcaacgt gaccggcgag gagccggtcg
     1801 aggacaaggg ccggatcagc cgcttctggg actcggtacg ctcgatgttc aagcgcagcg
     1861 atgacgaggc gtccgaagag gttgccgccg agacgccggc cccggcgccg gccaacaatg
     1921 ggccgatgct gacccgcgac tgccgcatcg tgccggtggg gcgtgaattc cgccggccca
     1981 tcgcctacga cgtggactac gtctacaagg gcaccaagta ccgctcgcgg ctgccggaag
     2041 accccggcaa ccggctgaag atccgggtgt cgatcacccc gtgggtcggc cccgagcagg
     2101 gcaccgccag caatccctga ttctgcgacc ccggcccctt gcgccggccc cggccgcatg
     2161 caaagatgga tgaccatgaa gctcaccgac ttccagcacg acagcagcgc agcccgacag
     2221 gcgtcgggca tgacctcgcg tgcgcgtcga ccggaacccc acatcctcgc tgggtaaccg
     2281 gagctttttg ctgttcgtcc gaaaaaaacc cagccgcccg gctgggtttt ttcgtttctg
     2341 cgttctgaaa gctgcaactg caaccttttc gttccacctt tggttcctgc ttttcccttc
     2401 caccgcgtcg aacccggcgc cgccacgcaa ggaaagatga tgtcccccaa gcacttcctg
     2461 aacacccagg actggagccg cagcgatctt gacgcgctgc tgacccaggc cgcgctgttc
     2521 aagcgcaaca agctcggcga ccagctcaag ggcaagtcga tcgcgctggt gttcttcaac
     2581 ccgtccatgc gcacccgcac cagcttcgaa ctgggcgcgt tccagctcgg cgcgcacgca
     2641 gtggtgctgc agccgggcaa ggatgcgtgg ccgatcgagt tcaacctcgg tacggtgatg
     2701 gacggcgata cggaagagca catcgcggaa gtggccaagg tgctgggccg ttactgcgac
     2761 atcatcgccg tgcgtgcgtt cccgaagttc caggactggg cctatgaccg ccaggacatc
     2821 gtcctcaaca gcttcgccaa gtactcgccg gtgccggtca tcaacatgga gaccatcacc
     2881 cacccgtgcc aggaactggc ccacgtgatg gccctgcagg agcacttcgg cacccaggac
     2941 ctgcgcggca agaagtacgt gctgacctgg acctaccacc ccaagccgct gaacactgcc
     3001 gtggccaatt cggcgctgac catcgccacc cgcatgggca tggacgtgac cctgctgtgc
     3061 ccgaccgccg actacatcct cgacgagcgc tacatgggct gggccgagca gaacgtggcc
     3121 gagagcggtg gttcgctgaa gatcagccat gacatcgaca gcgcctacgc aggtgccgac
     3181 gtggtgtacg ccaagagctg gggcgcgctg ccgttcttcg gcaactggga accggaaaag
     3241 ccgatccgcg accagttcaa gcacttcatc gtcgacgagc ggaagatggc gctgaccaac
     3301 aacggtgtgt tcagccactg cctgccgctg cgccgcaacg tgaaggccac cgacgcggtg
     3361 atggattcgc cgcagtgcat cgccatcaac gaagccgaga accgcctgca tgtgcagaag
     3421 gcgatcatgg ccgcggttgc cgggcgctga gtcaaacaag gggtagagcc gaccgttggt
     3481 cggctgctcc cgcagcggcg catccaacat ttcagccgac cagcggtcgg ctctaccgaa
     3541 atctcatcac caagtggacc tgacccccat gagcaacaaa gacgtcgttc tcgccttctc
     3601 cggcggcctt gataccagct tctgcgtgcc gtacctgcag gagcgcggct acaacgtgca
     3661 caccgtgttc gccgacaccg gcggcgtcga tgatgaagag cgcgatttca tcgagaagcg
     3721 cgccgccgag ctgggcgtga ccagccacgt caccgtcaac ggtggcccgg ccatctggga
     3781 aggcttcgtc aagccgttcg tgtgggccgg cgaaggctac cagggccagt acccgctgct
     3841 ggtctcggac cgctacctga tcgtcgatgc cgcgctgaag cgtgctgctg aactgggcac
     3901 caacatcatc gcccatggct gcaccggcat gggcaatgac caggtccgct tcgacctggc
     3961 ggtgaaggcg ctgggtgact accagatcat cgcgccgatc cgcgagatcc agaaggaaca
     4021 cacccagacc cgtgcctacg aacagaagta cctggaggaa cgcggcttcg gcgtgcgcgc
     4081 caagcagcag gcctacacca tcaacgagaa cctgctgggc gtgaccatgt ccggtggcga
     4141 gatcgatcgc tgggaagccc cgggcgaagg cgcgcgtggc tggtgctcgc cgcgcagcga
     4201 atggccggaa caggcgctga ccgtgaccct gaagttcgtc gaaggcgaag cggtcgaact
     4261 gaacggcaag gcgctgccgg gcgaccagat cctggcccag ctcaacaagc tgttcgcccc
     4321 gtatggcgtc ggccgcggcg tctacaccgg cgataccgtg atcggcctga agggccgcat
     4381 cgtgttcgag gccccgggcc tggtctcgct gctggccgcg caccgcgcgc tggaagacgc
     4441 cgtgctgacc aagcagcaga accgcttcaa gccggacgtg gcgcgcaagt gggtggagct
     4501 ggtgtacgaa ggcttctacc acgacccgct gaagaccgac atcgaggcct tcctgaagtc
     4561 ctcgcaggcc aaggtcaacg gtgaagtggt gctggagacc cgtggcggcc gcgtcgatgc
     4621 ggtggcggtg aagtcgccgc acctgctcaa caccaagggt gccacctacg cgcagtcggc
     4681 cgactggggc gtggaagagg ccgaaggctt catcaagctg ttcggcatga gctccaccct
     4741 gtacgcgcag gtcaatcgct gagcgattga ccacgtattc cgcctcaacc ctgcgccgtt
     4801 ggcgcgcccc cttcaacaag aagggggctc tccaccagac gcatcacggt agcgccgggc
     4861 catgcccggc cgaattccac aggattgttg attcatgctt gaacagacgc tcgatcacct
     4921 gcaggccctg gtgtccttcg acacccgcaa cccgccgcgt gcgatcacca ccggtggcat
     4981 cttcgattac ctgcgcgcga acctgcccgg cttcaacgtc gaggtgatcg accacggcgc
     5041 gggcgcggtc agcctgtacg ccgtgcgcgg gacgccgaag tacctgttca acgtgcatct
     5101 ggacactgtg ccggactcgc cgcactggag tgccgacccc catgtgatgc ggcggctgga
     5161 cgaccgcgtg gtcggcctgg gcgtgtgtga catcaagggc gcggctgctg cgctggtggc
     5221 cgcggccaac gccagcgagg gcgatgcggc gttcctgttc tccagcgacg aggaagccaa
     5281 cgacccgcgc tgcatcgctg cgttcctggc ccgtggcctg ccgtacgaag cggtgctggt
     5341 ggccgagccg accatgagcg aggcggtgct ggcgcaccgc ggcatcagct cggtgctgat
     5401 gcagttcgcc ggccgtgccg gccatgcctc gggcaagcag gatgcggccg caagtgcatt
     5461 gcaccaggcc atgcgctggg gcaaccgcgc gttggaccat gtggaatcgc tggcatcggc
     5521 ccgcttcggt ggcctcaccg gcctgcgctt caacatcggt cgcgtcgagg gcgggatcaa
     5581 ggccaacatg atcgcgccgg ccgccgaagt gcggttcggt ttccgtccgc tgccgtcgat
     5641 ggatatcgac ggcctgctgg cgacctttgc cggcttcgcc gaaccgcaag ccgcactgtt
     5701 caccgaaacc ttccgtggcc ccagcctgcc ggccggtgac atcgccgagg ccgagaaccg
     5761 ccgcctgctg gcacgcgacg tggccgatgc gctggaactg ccgatcggca acgcggtgga
     5821 cttctggacc gaggcctcgc tgttctccgc cgccggttac accaccctgg tgtttggccc
     5881 gggtgacatt gcccaggccc acaccgccga tgagttcgtg acgctggacc agctgcagcg
     5941 ctacaccgac gccgtgcacc gcatcatcgc cgccggcgcc tgattcttcc ctttccgacg
     6001 aaaccgaaat gtctcctgcc ctccagcctc accgccagac ccgccagacc atcgtgcgcc
     6061 tgctttccag catggccagc gcgaaggaga tcagccagta cctcaagcgc ttttcgcagc
     6121 tggatgccaa gcgcttcgcc gtggtcaagg tcggcggcgc ggtgctgcgc gatgatctcg
     6181 acgcactgac ctcctcgctg tcattcctgc aggaagtcgg cctgaccccg atcgtgctgc
     6241 acggcgctgg cccgcagctg gatgccgagc tgtctgccgc cggcatcgag aagcagaccg
     6301 tcaacgggct gcgcgtgacc tcgccggaag cgctggcgat cgtgcgccgg gtgttccagc
     6361 agtccaacct gcgcctggtc gaagccctgc agcagaacgg cgcgcgtgcc acctcgatta
     6421 ccggtggcgt gttcgaggcc gaatacctgg acgtggacac ctacggcctg gtcggcgagg
     6481 tgaagaaggt caacctggcg ccgatcgaag ccagcctgcg tgccggctcg attccggtca
     6541 tcaccagcct gggtgagacc gccggtggcc agatcctcaa tgtcaatgcc gattttgccg
     6601 ccaacgagct ggtgcaggag ctgcagccgt acaagatcat cttcctgacc ggtaccggcg
     6661 gcctgctgga cgaggccggc aacgtgatcg attcgatcaa cctgtccacc gaatacgacc
     6721 acctgatcgc gcagccgtgg atccacggtg gcatgaaggt gaagatcgaa cagatcaagg
     6781 atctgctcga tcgcctgccg ctggaatcgt cggtgtcgat cacccgtccg gccgacctgg
     6841 ccaaggaact gttcacccac aagggctcgg gcacgctggt gcgcaagggc gagaaggtgc
     6901 tgcgcgccac cgcatgggag caactggacc tgccgcgcct gaagcagctg atcgaatcca
     6961 gcttcggccg caccctggtg ccggactatt tcgagaagac caggctgctg cgcgcctacg
     7021 tcagcgagaa ctaccgtact gcggtgatcc tcaccgatga agccgaaggc gtgtacctgg
     7081 acaagttcgc cgtgctcgac gatgcgcagg gcgaaggcct gggccgcgcg gtctggaacg
     7141 tgatgctgga agaaacgccg cagctgttct ggcgctcgcg ccacggcaat ccgatcaacc
     7201 acttctacta cgctgagtcc gacggctgct acaagcagga tcactggaag gtgttctggt
     7261 tcggcgccga tggcatcgat cgcatcaaga cctatgtcga tcactgtgcc cagcgcaccc
     7321 cgagcctgca gggctgagcg atgaacaacc cggacgtctg gaacaccgtc cccacactgc
     7381 gcgggcagca cgtactgctg cagccgctgc agcttgagca cgtccccggc ctgcgtgccg
     7441 cgctggaagg cagcggcctc gaccagctct ggtacaccca ggtgccgtcg ccggagcagg
     7501 ccgaggccta tgtgcaggcc gcactgcagg cgcaggccga aggcaagggg ctgccgttcg
     7561 tgatccgcga tgccgccggt gacatcatcg gcagcacccg tttctacgac atggacgcca
     7621 gcgtgcccaa gctcagtctc ggctacacct ggtacacgcc gcgcgcgcag cgcaccggcg
     7681 ccaataccga agccaagctg ttgctgctgc agcacgcctt cgaagtgctg ggctgcatca
     7741 gcgtggtgct ggaaaccagc tggttcaacg ccacctcgcg caccgccatc gcccgcctcg
     7801 gcgccaagca ggatggcgtg ctgcgcaacc acaagcggca tgccgatggc acgccgcgcg
     7861 ataccgtcat cttctccatc atcgacgcgg aatggcaggg cgtgaagcgc cacctgcagt
     7921 accgcctgga ccgtcacgca tgaacgattc gactttcacc ctgggcatcg tcggtgcccg
     7981 cggccatacc ggcgccgagc tgatcaagct ggtggccgca cacccgcgcc tgaaactggc
     8041 cttcgtgtcc tcgcgcgagc gcgccgggca gcgcctgtcg gaccatcacc cggagttcca
     8101 gggcgatctg cagtacgaga gcctggatgc tgacgcggtg gccgccaagg gcgtggacgc
     8161 ggtgatcctg gccctgccca atggcctggc cgcaccgttc gtggctgcgc tggaagcggc
     8221 caggccggag accgtcatcg tcgatctctc ggccgattac cgcttcgaca acagctggta
     8281 ctacggtctg ccggagctga cccgcaaccg ctacaacggc cagaaacaca tcagcaaccc
     8341 gggttgctat gccaccgcga tgcagctggc ggtgcatccg ctgctggacc tgctggccgg
     8401 cccgccgcag tgcttcggtg tctccggtta ctccggtgct ggtaccacgc catcggacaa
     8461 gaacaacgtc gagctgctgg ccgacaacct gatgccgtat gcgctgacca atcacgtgca
     8521 cgagcgcgag gtgtcggtgc agctgggcgt ggccgtcgag ttcatgccgc acgtcgcgcc
     8581 gcatttccgt ggcatcacgc tcaccgccaa cctgtggctg aaccgcgtgc agacccgcga
     8641 gcagatcgtc gagcgcttcc agcaggccta tgcgggcgag ccgctgatcg aggtggtgga
     8701 tgaagcgccg tgggtcagcc gtatcgccgg tcgtcatggc gcccaggtcg gtggcttcac
     8761 cctggccccg ggcggcaagc gggtggtcgt ggttgcgacc ctggacaacc tgctgaaggg
     8821 cgcggccacc caggccatgc agaacctcaa cctcgcgctg ggcatcgacg aactgacgtc
     8881 gatcccgcac tgaacacgca ttccggagcc ccccatggca gaccttcttt ggcagaagcc
     8941 cggcgtcgcc gtcgacgccc agatccagac cttcctcgcc ggcgacgacg tgatcctcga
     9001 ccgcgagttc ttcctgcacg acatcgccgc cagcgccgcg cacgcgcagg gcctgcagca
     9061 catcggcatc ctcagcgccg acgagctggc cggcctgctg cgcgagctgg aggtgctggc
     9121 gcaggacttc cgcgacggcc gtttcgtgct ggacacgcag tatgaagacg gtcactcggc
     9181 aatcgaagca cggctgaccg aacgccttgg cgacgccggc cgcaagatcc acaccggccg
     9241 cagccgcaac gaccagatcc tggtcgccac ccgcctgtgg ctgaaggaaa agctgcagcg
     9301 cgtggcacgg atcagcgccg aagtagccaa ggtcgcgctg gaccgtgcgc aggccgagaa
     9361 ggatctgccg atccccggct acacccacat ccagcgtgcc gtggtgtcgt cggccggcat
     9421 gtggtgggcc ggctgggccg aggccttcat cgacaacgcc atccgcgccc gcgacacgca
     9481 tgcgctggtg gatgccaatc cgcttggcac cgctgccggc tacggcgtga acctgccgct
     9541 ggaccgtgaa cacaccaccg ccgcgctcgg ttttgcgcgc atgcagatct caccgatcta
     9601 cgcgcagctg tcgcgcggca agttcgaact ggccgcgctg gaagcgctgg ggggcgccac
     9661 gctggacctg cgccgcatcg cctgggacct gtcgctgttc accagcgccg agttcggctt
     9721 cgtcgcattg ccggcgcagt acaccaccgg cagttcgatc atgcccaaca agcgcaatcc
     9781 ggacgtgatc gagctgatgc gcgcgaccca cgccagcgtc gccgccgcgc gtaccgagat
     9841 cgagcagctg ctgtcgctgc cgtcgggcta tcaccgcgac ctgcagtcgt ccaagggcgc
     9901 catcttccat ggcttcggcc gcggcctgtc cgcgctggaa ctgctgccgg cgctgctggc
     9961 caacctggaa tggcgcgacg acaaggttcg tgcggcgatc gactcgggca tgtacgccac
    10021 cgatgtggcg gtggaagcgg cggtggccgg cgtgccgttc cgcgaagcct acaaggccgc
    10081 ggcggcaggc gccgacagtg cagggcaggg ccgtacgccg gaaggcagcc tggccgcacg
    10141 cgtgtcaccg ggctcggccg ctgacctgcg cctggatgag ctgcgcgcgc gctggcaggc
    10201 gctggcctga tggcgggcac cgtctacctg gtgctggcca tgcgccgggc cgacttcaac
    10261 gccgccgccg tgcagccgca ccgtgacttc ctcgatgcgc tgcaggcgca gggcaagctg
    10321 cagctgaccg gcggctttgc cgatggcagc ggtggtgcct atgtgctgtg caatgtcgag
    10381 agcctggagg aggcccaggc catcgtcgcc accgatccgc tggtgacgat gcacgcttcc
    10441 gagctgaccg tgcacgaatg gactacccgc tgaggccctg accgatgacc ctgcacgccg
    10501 ccgcagttgc ctcgccgttc ccggaacagg cgttgccgcc ctggcggcgc gcggtgctga
    10561 aagtcggcag cagcctgctg gccgccgatg gcggcggcct gtcgccacgc cacgcgctgg
    10621 gcctggccca gttcgtctcg gccaacgtgc tggccgggcg cgaggtggta atcgtgtcgt
    10681 ccggcgctgt ggccgcgggg cgcgcgatcc tgccgcgggc cgatgaaccc ggtgcggcga
    10741 tggcagcccg gcaggccctg gccgcgcttg gccaggccca gctgatcggc ctctggcagc
    10801 gcttcttcga acgcccggtg gcgcaggtgc tgctgaccca cgacgacctg cgcaaccgcc
    10861 gccgctacct caatgcacgc gccacgctca gcgaactgct gcggctgggt gcgctgccag
    10921 tggtcaacga gaacgacacc gtatcggtgg acgaactcaa gctcggggac aacgacaacc
    10981 tggctgccac ggtcgccgcg ctggtcgatg ccgatgcact gttcatcgcc accgacatcg
    11041 atggcctgta cagcgccgac ccgcgcacgg ccgccgacgc acggccgctg cacgacgtgc
    11101 ccgaactgga tgaggcggtg ctggccatgg ccggtggcgc cggttcgcgt gccggcaccg
    11161 gtggcatgcg caccaagctg gaggcagcgg cgaaagccgg ccgactcggc atcgagactt
    11221 acctgttcaa tggccgcagc ggtgacgtgg tgcgtgcact ggcgcaggat cgcctgcatg
    11281 gcacccgcat ccacgccgcg cgcagccgcg aggcggcccg caagcactgg ttgaggcatg
    11341 cgccgctggc cgagggcgcg atcatcatcg atgccggtgc ggcacaggcg atgcgcgaga
    11401 agggcgcttc gctgctgccc ggtggcatca ccggtgcaga gggcgcgttc cgtcgtggcg
    11461 acatggtgca ggtgtgctgg aacgccccgc agggccgcgt ctgcgtcgcc cgcggcgtca
    11521 gccagtacgc ggccgacgat gtgcgcagga tcgccggtcg ccattcgcgc gacatccagg
    11581 ccctgctcgg ctacaactac ggcggcagcg ttgttcaccg cgacgacctg gtgctgccat
    11641 gaccggattg aaggacaccc cgatgagcgg aatcgaaacg caggcgcgcg cctgccgtga
    11701 cgcagccctg gttgttgccg gcctcgatag tgcggcgcgc cgttcgctgc tgctggcgat
    11761 ggcccaggca ctggaagtga atgcagggct gatcctggcc ggcaacgcgc gcgaccttgc
    11821 cgctgcgcgc gagaagggcg tgggcgctgc catgctcgat cgcctggcat tggatccgcc
    11881 gcgcctgttc gcgatggccg aagccgtgcg cgaagtggcc gggttgccag acccggtcgg
    11941 ccaggtgacc cgtaacgacg tgcgcccgaa cggcatccgc gtgcagaagg tgcgggtgcc
    12001 gctgggcgtg atcgcgatga tctacgaggc acgcccgaac gtgaccgccg aagccgccgc
    12061 cctgtgcctg aaggctggca atggcgtgat cctgcgcggc ggttccgagg cgatccattc
    12121 caacaccgcc atcgcccacg cgctggccgg tgccttgcag gccaacggcg taccgccggc
    12181 ggcggtgacc gtgctgaccg atctgcgccg tgaagcgatg ctggagctgc tgcagctgca
    12241 tgagctgatc gacctggcca ttccgcgtgg cggcgaaggc ctgatccgtt tcgtcgccga
    12301 gcatgcgcgg gtgccggtga tcaagcacta caagggcgtc tgccatctgt tcgtggacgc
    12361 cagtgcagac ctggacaagg ccatcgatct gctggtggat ggcaagtgca gccgcccggc
    12421 cgcctgcaat tcactggaga cgctgctggt gcacggcgac gtggccgatg cattcctgcc
    12481 acgcgtggca cgggcgctgg gcgagcgcgg tgtgcaactg cgtgcggacg agcgtgccca
    12541 gccgcagttg ccaggcagcc gcgccgccac cgacgaggat tacgccgccg agttcctcga
    12601 cctggtgctg gcggtacgcg tggtcgacga tctggatgcg gccattgccc acatccgccg
    12661 ctacacctcc gaccataccg aagtgattgc caccgaggac agcggcaacg ccgagcgctt
    12721 cgtcaatgcg ctgcgctcgg cggtggtgat ggtcaatgcc tcctcgcgct tttccgacgg
    12781 cggccagctc ggcctgggca gcgaaatcgg catttccacc acgcgactgc atgcctatgg
    12841 cccgatgggc ctggaagcgc tcaccgtcga acgtttcgtc gtgcgcggcg aagggcagac
    12901 gcgcaagtag atccacgcca tgcgtggacg ctcctcgtgg cggacatcgg tgccgaccaa
    12961 ggtcggcacc caccggagag agcgccgacc aaggtcggca tctaccaagg caggtgcccc
    13021 ccaggtcggc gcctgacggg cagcggggct acaccacctc gcggcggatg ccgatcggcc
    13081 gtgcatgctc atccatgtgc agcgtggcgg ccttgcatcc catcaggcgt tcggccaggc
    13141 cggtgctggc gcccagatcg gccgcgacct cgttgaggct ggccagcggg cgtggcaggc
    13201 gccggtcgtg gccgcggaag cgtgcacggt tgtactcggc ccagccgatc agcagcacgc
    13261 tggcgcacag cagcatcagc ggcaacgcca ccagcacgta cggatcgagc tggttctgcc
    13321 gctcatacag ctgctgccac gccagctggc cgccaatcag ccacgacagc agggttacca
    13381 gcggcgccca caggtagaag tagaagcccc agaatgccag ggtgacgaag ccccaggccg
    13441 tgcgctggaa gcgcggctgg cggtgcggct tgcggatcgt ccgcgagtcg aagcggttgg
    13501 atgggcgttg tgcgttcatc ggattccccg gtcagggctg gtccaggtgg cgcgcttgcg
    13561 gcgacggcgc agcagcgtct tcggcagcgc caccagggtg gtggaaaggc tgatcagcca
    13621 gtacgccatc gggtaccaga tgacccagaa atagttgcgt ccaatctgtg tttcgtagcg
    13681 ccggtcgatg atcaggctgc tggcgaactg cagcaggcag accagcgcca ggatcacgcc
    13741 atgccattcc ggcaacaggc tgacgatgtg cagctgcggg ggcagctcga tgaactttcc
    13801 caatgcccac agcagcacga tgaacagcat ggtgtaggcc cacaccacgc tcagcacata
    13861 ctccagcagc accccccaca tgcgccgttc cttccagtgc agcagcgacc gcgcatgccg
    13921 cagcatcact tccacgccgc cctgcgccca gcgcagccgc tgccgccaca ggcccttcaa
    13981 tgtttccggc atcaggatga agcacagcgc gttcggctcg tagcggatgt cccagtgcgc
    14041 gtgttgcagg cgccagctga tgtcgatgtc ctcggtgacc atgtcatccg accaccagcc
    14101 gacctggtgc agggcggtac gacggaagcc ggcgattacc ccggagatgg tgaagatgcg
    14161 cccgtacacg cgctgtgcgc gcttgatcat gccgatgatc gatgagaatt cggccacctg
    14221 caggcgaccg agcagggtcg aacggttgcg gatgcgggga ttgccggtca ctgcaccgac
    14281 ccggctgcca ctggcaaggt gccagaccat ccagtgcaac gcgtgctctt ccagcatcgc
    14341 gtcgccgtcg atgcacacca ggtactccga gcgcgccgcc agcgccccca tgcgcagcgc
    14401 attggccttg cccaggttgc ggtccaggtg cagcacgcgc agccgtgggt gccgggccgc
    14461 cagagcgtcc aggcgaatgc cggtgtcgtc gctgctgccg tcgtcgatgg cgatcacctc
    14521 atagtcggcc ggataacgct gtgcaagcgc cgcgccgagc gtgtcgtcca ggttctccga
    14581 ttcgttgtgg caggggatca gcagggtcgc gaacggaggg tcgaccatca ggggtggatc
    14641 gttgcgcggg cgtgagtggc gctcgcgccg gaagtagtag tagagcccgc cggacatcca
    14701 gaagaacgcc atcaccatcg ggtagtagaa ggcgaactgg aacaggatca gcagcatggg
    14761 atgcatgtcc atgtcacttc tccgggtacg ggaagttgcc ggcggacatc gccgcacggg
    14821 catcgtgggt ggagggctgg tcggcgatga agtcgtccgg gtaccaggcg aagtggtgca
    14881 cgccctgcgc ctgcagctgg cggatctgcg cgcgcaggcg ctcggcggga atcggctggc
    14941 cgctgttcca gtcgacggtc tgcagctcga acagggtgtg ctgcagctgg gggtcgtggc
    15001 tgcgtacggc ggccagcagc tggtccagcc agcgctccgg gtgcttgctg ccttccatcc
    15061 acggcatcgc catcagcgca gtctggtcgt aggccttgtt gaacaggtcc aggcgttgag
    15121 cgaaccaggc ttcgctctgc gggcgcagta cgggctcggc atacaggttg cgtaccgttg
    15181 ccagcttagg tcgccagcgc tgggcgctgt cacgcagggc cagggtgaag tcgatcagcg
    15241 catgggtgcg cgcgctgccg ccgtcgccgg aggacagtgc gggcagttcg gtgtcgcgca
    15301 ggtagccatc gtcgtggaac agcaggcctt cgaagtacga gttgaccgcc aggtcctcgt
    15361 agatgtcgag catgatctgg cgcgcttttg gattggtgaa atccaaccgg tacatgccgt
    15421 cggcatcgcc gttgcggatt gccagtgcct tgcgcagcac cggatcgggt agctcgaagc
    15481 cgagcaccgg cagccacgcg tagaccttca ccccggcgcg cgatttcagc tgccacgcga
    15541 cgcggctgaa caggtccgcg cgcatcggca tgtggcggtt ggggaagtac agcgcatcgg
    15601 cggtgttgtt gccgtccggg tcggcgaacg cctgcaggta gacgtgggtc ggcgcgatgc
    15661 gcttgacccg ctcgatcagt gcatcgagat tgcgcgcctg ctgtgcagga tcggggtcat
    15721 atacatcgtc caggtcgatc tgcagcgcgc ggatgccatc cagcgcgacg tcacggcgca
    15781 gttcgtaggc caggccctcc acggtcggat tgtcactgac caggaagcgt gccagcccgt
    15841 gcaggtcgct ggccaccggg gtgctgcggc cttccagatc gaatgaaacc ggcatgccca
    15901 gctgctcggc gatgtcgttg ctcagctggt tgtaggcggc atacggccag acaatggccc
    15961 gtgggcgtac gcccaggtgc tgctcgatac gctgcacgct gcgcgagagg tcggcacgca
    16021 ggcgttgttc atactgggct tcgctttcgt agctgtgggt ggccgggctg tagacgcggg
    16081 tcaccaccgc tggagtggag ttgccctgcg gattggcgag cacgccgtga tgcaggtcat
    16141 cggtgtggct ggccacttcg atcaggccac tgtcatgcat ctgtttcagc tgtgcccagg
    16201 tgacgaagtc gtcacgcccg aacgggcggt agccatagtc gatggtgcgc cccggcgcca
    16261 tgtccacgta gtcggtgatc accgccacca gcgccggata gcggtaggcc tggagcaggg
    16321 ggaaggcctt gtcatagaca ctgcgcaggc cgtcgtcgaa ggtcagcagc accggcttgg
    16381 gtggcagcgt ggtgcggccc tgcgaggcct cgatcacctg cgacagcgag accggatggt
    16441 aaccgtgcgc gcccagccag tctaggtgcg cggcgaagtt ctgcgtactc accgcatagg
    16501 tatcggcatc gcccttggcg gccacctggt cgcggatgtc gtggtagctg aggatcagca
    16561 ggccgttgtc gatcgcatca agatgcaggg cctgctgggc gaaggctggc ggtgcaatgg
    16621 ccagcaacag cagcacgatc agtcgcagga tgcgggccat gtcagtctcc ccagcgcagt
    16681 gcagcttcga agccgatatg acgctcgcga tggccgtcgt agaccggccg cgaccagcgc
    16741 acgccgtact cgaacacgcg tccgggcccc agctgccatt cgtgcatgta ggacaccgac
    16801 ggcaccagcg cactgccgaa gccatcctgc cagtagtcgc ccagcgagac cgtcagccgg
    16861 tgccggaaat ggcgctcgta gtgacgccac agctgctggt cgatacgcag gccgatctcc
    16921 accatgcggt cgcgcttcgg gttgaaataa ggcgcgtcgt cgcggctgcc gcgactggcg
    16981 tacgcgcttg ccaggccatc gaccagccag cgcggacgcg tcagcagccg ttgttcgagg
    17041 ccggtactga ccagttcgcg atggttgcca tcgtcgtagc ggaagcggct ggcgccgaac
    17101 atccagtggg tcagctcgct tcgacggtag tccacctgtg cgctcacgct gtcggcagtg
    17161 ataccggcca cgcgggcctg catcgaggct tccggatcat tgcgagcggc taccagcccg
    17221 gcgtgccagt aatcattgaa ctgccagccg acgcctacgc gcaggccggt gtcgccgatg
    17281 tggtcattgg cgcgcagcgc cgcggcttcc gcatccagcc ggccgaagcg gtagcgcacg
    17341 ccagccccga gccagagcgg gtcgatgcgc tggtcctgga agtcgatcga gcggcggtcg
    17401 gcgaaggcga acaaccgcca gcggtcatcc agcatcggcg attcgacttc aacgccgtaa
    17461 tggcgatcgt tgttgcccag tggcgacgtg ccgccgccgc ccgagctgcg gccgatgtcg
    17521 gtccatgcct tcagctgcca gccgcgatgc gcgcgccacg cctggtccat gcgctcgacc
    17581 gcgggttggg tggggtagcg cgcgatcaga tcgtcgtgca gcggccgtgc caggtcatca
    17641 cgctgcaggg cgacgtaggc ttcttccatg cccaggcggg cttcgatgtc acgtgggtcc
    17701 agcgcatgtg ccatctgctg ccgctgcagc gcccggcgtg gccagccgcg catcatgtac
    17761 acgctgccca gcgcactctg cagcccaccg ttgccgggtg cgatgtcgac catcgattcc
    17821 aggtcgtgct gtgcggtgcg cagatcgcca ctgtaggcgc gcaccatcgc caggttcagg
    17881 tcggcctcgt agcgtgacca gttcgggtac ggtgatttgc cattgctcca gcgccacgcc
    17941 ggctccttgt cgcgccaggc ctgcagcagg tcgatggcct tttcctgctg ttcgctttcc
    18001 aggtaggcat aggccagctc cgaatgcgag gcgtcgcggg tcgggtcgcc ggccactgcg
    18061 gcctgcagca ccggaatggc ttcctgcggg tgcagggtac ccatcagcga atcacccacg
    18121 gcgggcagca cgtagtcggg cagggtgtgg ccttcggcct gcagcgcgcg tgcttcctcg
    18181 cgcacctgcg catgtcggcc caggcggttg agcaggatca gccggtccat gcggatgcgc
    18241 agcggcgcct gcgccggcgg cgtgccttcg ccccccagat agcgctgcat gcgggccagg
    18301 gttgattcgg cctcttccag gcggctgtct tcgctgctgc tgtaggccag gctccagacc
    18361 accagcttgg ccaggtagtc cccttccagg cgctgcttct gggcagcgtc gaacagctgc
    18421 gggcgctgct ggtagagctc ccaggcccgc caggcgttgc cgatgtcgcc caaggtcagt
    18481 acgcgcagct tgaacagcag atcgtcgttg ggctgctgct ggctggcgcg ttcgatcgca
    18541 cccagcgcat ccagccagcg ggcctggtcg cggtagcggc cgatctcggc cagcgccgcc
    18601 tcgcggtcag gcggggcagc gctgctggcc caggccagcg cggtgcaggc aaggccgacg
    18661 cagagcgcca gccggcggtg gacaaccatt ggggaccccc ttggcttccg aaccagacaa
    18721 ccatgaaaac tgtgacgcac atcacatgcc agcttttggc gtggccgtgg cccgcgtcac
    18781 tcccttcgtg catgccgccc agcaaggacg ggtacaaccc ggacagcgac ctgcaatgtc
    18841 ttgtctgaaa cgaaagtccc ccgcacaccg agtggtgttc cgggcggcgg agccgccccc
    18901 atgcccgatg ccggcacgcg gcaaggatgg gcattcgtgg gcactatccg ccgggaattg
    18961 tcagtccggc gtcaaaatgc gcgtgaaggc cgagcgccca cggacggggc cggcacgcgg
    19021 ccccgcagca tcaccagagg tcttccagtt tgcgcggctt gcaggccacc caggacgcgc
    19081 acagcatcag agtggcgcag ccgaacagga agctgaacgg gagggtccag ccgtcgctga
    19141 cggtgtgcag ccagccgacc aggaagggcc ccaggcagct gaagctgtag cccacgccct
    19201 gcatgaagcc ggaaagcgcg gccgaaccgg tgggggtgcg tgtgcgcaga ttgatcatgg
    19261 tcagcgccag cgggaaggtg gatgggccaa cgcccagcag gcaggcccac agcagcggtg
    19321 ccttcatcgg cgccagcagc aggccggtga aggcgatcac gaacgagaag aagccgatca
    19381 gcaccagcgg gaacgggttc tgcaggcgca ccgccattga cggaatcacc agcgagggca
    19441 gcaggcccag ggccgagaac accgccacca tcacgccgcc gaaggcgggc gtgccaccgg
    19501 cctcgaccac gatgcgcggc agccaggtga acatcgaata ggtcatcagc gaggtcatgc
    19561 cgaacatcag cgtcatgctc cagcccagcg aggtgcgcca gaccttgcca tgcggctgcg
    19621 cggtcggatc agtggcatcg gcctgcggct tcggcgcacg cgtggccagc accagccacg
    19681 gcagcgcggc ggccagcgcc agcagggccc acatgcccag cgacacccgc cagcccgcgg
    19741 cgttggccac cggcaccgcc agcagcgccg gcagcatcgt gcccagctgc agcacgctga
    19801 tgtagagcgt gctcatggtg ccgaccttgt tggcgaagta acgcttcacc agcggcggca
    19861 ccaccacgtt gccgatgccc atgccggcca gtgccagcac cgaaccgaac aacagcgtgc
    19921 cgacattgcc ggcgctggag cgcagcagca ggccggccat cgccatcacc atcgccagca
    19981 gcgtggtgcg ctccaggccc aggcgtcgcg ccagggccgg cgtggccacg ccgaacaggg
    20041 cgaacgaggc ggtcggcagc atgcccagca cgccggtcat ggtggtgccg aagccgaact
    20101 gctggccgag cacgtccagc agcggcgtga tcgaggtgac ggcggtgcgc aggttgatcg
    20161 cggccagcag gatcgcggcg aacgcgagga cgcgaccgtg cagcagcgac ggcgaatcgg
    20221 aaggggagga actcatcggt ggtccttgca ggtgtcgcat gccgtgtctt ggcgtgcagc
    20281 gccgcaccgg ggctgtgccg gcgcggtggg tgggggaagg cccattgtac gtggctggcg
    20341 gggtgaggtc ccgtcggcgc gatctgtcgc gttctgcata gccgggtgag ggcggccagt
    20401 gcgccatggg tatgcgccct ctgccagcca accccttgcg tttcgggcca ttgcgcgcgt
    20461 ttggccgcag catgcacgcc gtgatggacg ccgcaatgaa gtgcagaggg tgtggggcgt
    20521 tgctaggttc gggccacatc catgggcgaa ggattgcagg gtggcaagga cgttgattgt
    20581 ggtgggtgat gcaaccacgg gcggtggcag ggtcatctgc ggatcgccgg ttaccgacat
    20641 cgagggcatg ccggttgcgc gggtgggtga caaggccacc tgccccaagc accagcgcgt
    20701 ggccaccatc gtcagtggcg acatcacgct gacgtttgaa ggccagcccg tcgcacgcca
    20761 tggcgacagg ctctcgtgcg gctgctcgct gattgccggc aagcaattcc gcgtctatgt
    20821 ggacatgggc gggggaggtg gcggggctga cggtgtctgg cccgccgctg ctgcctcgga
    20881 tctgggcccg ttgcccgtag cgctgcaggc tgccaaggag cccgtgtgtg aggaatgcct
    20941 gctggccgct tcgcgctccg gcgcaccgtt cctggggcgc tgaatgaatc gatacgtgat
    21001 tgtcgacgca gcggcgtacg ccgacacgcc caaggcgctg gcctggtacg cccaggacct
    21061 gccgcaccgg tccctgttgg cgcgccagcc cgaggctgcg cacgcatccg tcggcccgtg
    21121 gctgctgcag ttgcccgcgc agtcccacac ccaggtggat ggatggttgc gggcgctgga
    21181 actggacaag ccggtcgtgg cctggctgcg cagtgaggtc ggctttgaag ccgtgttcca
    21241 gcacctggag gcctgcctgg acctgcgccg ccccaacggc acgctggcac tgctgcgcta
    21301 ctgggatggc cgcgtgttcc tgcgcttgca gcgggccttc acgctgcagc agcgcaggca
    21361 gctgatgggc ccgctgcggc agtggcgctt ccagatgctg ggccagcact acgccctgga
    21421 acgtgacgcg ttgtatgcag cggagaccgg ttgatgtttg agatcaacga ggaacaggag
    21481 gccctgctgc gcctgcctga cccttccact tttttcccgt tgttgtgccg ggagattcgc
    21541 gaggaatacc ccggcagcgt cggtcatctg agcgatggcg cattgatgga tgaggtggtg
    21601 cgaagccatg accatgcagc ctatgtgctg cgcatcaccc atctgccggt gctggtgcgc
    21661 tgggtgaagg cggacgtggc atgggcgcgc ggtttgcggg ccgtcccggc agcggacatg
    21721 tggatgcgca gcgcagagaa cccgaatctg gcagcggcgg atctgctgtc gaatctggca
    21781 ggtcactagg agcaacaatg ggcaccagaa tcatcggccc gcggccctgg cttgggcccg
    21841 gcatgggagc cggtaatggc ggcgtggatg aagacggcaa tccagtggaa ccctatggcg
    21901 ggccgaccac cggtgacgtg gccgatggca ttcgcgatgt ggtgggcgat atccagcagc
    21961 gggtgcgcgg taaagccaag ccggatgcgc gcgctgagcc gacggccaag gcgcgggagg
    22021 tggactgctc gcagatgccc gacgagaccg cgtgcaacga gtgcctgctg aaggagggat
    22081 tcattggtcc gccccgcact gggcgctatg tcacccagcg caatctgatc aactacgagt
    22141 accagctgta catcgccaac ctgcgctcgg caccgctgcg ctttggattc atggtggcgg
    22201 acaaggccga tccggcgcgg acgttcttct cagtggatac gttgtttgac tatctgcacc
    22261 ggaagggatt ctcccgcacg gtgcaggagt ggcacttcaa cgcctgtgag tttgacgggt
    22321 tctggttgaa ggactgcacg gtggtggagg cgaaggggag gtatgagcat tttcttgatg
    22381 aagaagaaca gccgaagtac aggtttgtgg tgcccagtgt ctttcagcca tggagggagc
    22441 agatgattcg gcagcgcgcg gcgattgcga ttgctgagcc tcaaggaagg cttatatggt
    22501 gcttcatgca ggggagggca atggcagcag ccattgaatt tgctcgactt gatccgttga
    22561 tttgcagata tgaaccattt cggggggggg cggtatatga tcatacgagc tcaagccgat
    22621 ctgtggacag cgcctgtcgc gaaatctccg cgcgaagtgc tgcgattggc tgtggagata
    22681 actgagaaac tggcgcggat gcatccctta atgaaaggat ggtatgcgct tccttcgagt
    22741 cagaaagaga agactctctc cttgaatgat tcggaagagc tcttgactcg gatggaacgg
    22801 gatgtcgaga agcgtcgcca gcgatttggt gactatgcgg aactcggcgc gtccttgagt
    22861 ctcgccaacg tcgataacga ccgcgactgg cgtaaaccgg gagtggttgt gctccagttg
    22921 gacccgacaa ctggatttaa tgctttcagt attgagggtc ttgagccgtt tggggatgcg
    22981 acgtctctgc tagtgctcaa tgtgctgatc gagctggtgg aggcattgcg gccgacgttc
    23041 gcctgtacga atgtcaaagc cagaacgccc gagaagggcc ttgtgacata tcagatgagc
    23101 cgacgcttgt atcaacaccg acagttcttc ggttggatgg gcttcgtgcc cgcgcagatc
    23161 acccacacgc agatacgcga cgcgcatgcc gtccacccgg tcgatggcct gggtacggtg
    23221 atcgtctcgg tgccgggtgt gtttgacccc accgacgacg cgcaggtgga caaggtgcac
    23281 cgcgtcgaaa tggatctggc cagctatgac ctgttgccgg tgacagatcc taacctcaag
    23341 ggctgaacag atcatccatc tgccggtgct ggtgcgctgg gtgaaggcgg acgtggcatg
    23401 ggcgcgtggt ctgcgggccg tcccagcagc ggacatgtgg atgcgcagcg caaagaaccc
    23461 gaacctggca gcggcggatc tgctgtcgaa tctggcagga cactaggagc aacgatgggc
    23521 accagaatca tcggcccgcg gccttggctt gggcccggca tgggaggtgg taacggcagc
    23581 gtggatgaag acggcaaccc ggtggacccc tatggcgggc cgaccaccgg tgacgtggcc
    23641 gatggcattc gcgatgtagt gggcgatatc cagcaacggg tgcgcggcaa agccaagccg
    23701 gatgcgcgcg ctgagccgac ggccaaggcg cgggaagtgg actgctcgca gatgcccgac
    23761 gagaccgcgt gcaacgagtg cctgctgaag gaggggttca ttggtccacc ccgaactggg
    23821 cgctatgtca cccggcgcaa tctgatcaat tacgagtacc agctgtacat cgccaacctg
    23881 cgctcggcac cgctgcggtt cggtttcatg gtggcagaca aggccgatcc ggcgcggacg
    23941 ttcttctcag tggatacgtt gtttgactat ctgcaccgga agggcttctc ccgtaccgtg
    24001 caggagtggc acttcaacgc ctgtgagttt gatgggttct ggttgaagga ctgcacggtg
    24061 gtggaggcga aggggaggta tgaccatttt ttgaatgaag caggacttcc caggtatgag
    24121 tttgtggagc atggagtgtt caggccttgg ggggtgcaga tgaacaggca gcgcggcgct
    24181 atcggtgttg ctggtcggca ggcaaagcta ctgtggtgct tcatgcagca tcgaacgatg
    24241 gcggcagcca ttgaaacgga atacgtcgat ccaatgcttt gcaggcacat accattccgt
    24301 ggagatattt gatgattgtc agtgctcaaa caaacatgcg aacggatcct gtttctcgaa
    24361 cacctgacca gttgctcagt ttggcggtac aggcgacgca acgtctcgcg ccgcttcacc
    24421 cgttaatggc acggtggtat gcgctgccat cgaacgcaaa ggaaaagtca ataccgtttg
    24481 agaatactgg tgcgatcctc gccaggatgg agcggaatat cgagaaggat cgagacagat
    24541 ttggggattt cgatgagctg ggcgcttcac tgttgctggc caacgtagac aatgatcgtg
    24601 attggcgcac gccaggcctt gtcgtgctcg gcttggatcc cacacttggc tcccataagt
    24661 ttcgtcttgt tgggattgaa ccatttggtg aggctgcgcc aaatttaatg ctcaatgcaa
    24721 tgatcggctt ggtgaaggaa gtcaagccgc gctatgcctg tacggatgtc aaagcgatga
    24781 cgcacgagaa agctttggtg acgtaccaac ttgatcggcg cttgtaccaa caccgtcggt
    24841 actttggctg gatgggcttt gtgcccgcgc agatcaccca cgcccagata cgagacgcgc
    24901 atgccgtcca cccagttgat ggcctgggta cggtcatcgt ctcggtgccg ggcgtgttcg
    24961 atcccaccga cgacgcacag gtggacaagg tgcaccgcgt cgaaatggat ctggccagct
    25021 acgacctgtt gccggtgacc gatcctcact tcaagggctg agcacgacca cggccagccc
    25081 tgtcgccccc tcgcgaagcg cttccgtcgc ctatccatgg aggaagcaga tgatcattcg
    25141 tgcccaggaa agtctgtgga ccacccccgt ctcacgttca ccggatgagg tgctgagctt
    25201 ggcctcgcta acagtacaag gcctcgcact actgcaccca tcgctgagaa gatggtatgc
    25261 actgccttca agtcctaagg aagagtgtat ttcactcgac gattcgagtg cgctcctgtt
    25321 tcgaatggag caggatgttg gcaaagatcg tagacggttc ggtgattttg aaacgttggg
    25381 tgcctccctc acgttggcca acgtggacaa tgatcgggac tggcgcaagc cgggattggc
    25441 cgtgttggat ttgaacccaa caacaggatt caattccttc agtctcgtca ggcccgagcc
    25501 ctttggcgag gcaattcctt ccctgatggt caacgcttta attgggctgg tgaagacaat
    25561 acggccctcg ttcgcgtgcg ttgatgtgaa gtcccgaacg cccgagaagg ggcttgtgac
    25621 ctatcagata gaccgccgcc tgtatcaaca ccgggaattc ttcggttgga tgggctttgt
    25681 gcccgcgcag atcacccacg cgcagatccg cgacgcgcat gccgtccatc cggttgatgg
    25741 cctgggtacg gtgatcgtct cggtgccggg tgtgtttgac cccaccgacg acgcgcaggt
    25801 ggagcgcgtt catcggctcg aaagggatct ggccagctac aacctgttgc cggtgaccga
    25861 tcctcacttc aagggctgag cacagccacg accggcccgc acccacgcga agcgcctccg
    25921 ccgcgcgcag ggtgacgtaa tccgcacgac ccccatcctg ccgcgcggca caacggcgct
    25981 tgcggcttaa cactgccaag cctttgcgcc cctagcttct ggacgcccgc agacgctgtg
    26041 caacaatgtc gcgaatcgta cgaattgttg cagtggcgcg tttgcccatt ggcacatcgt
    26101 gcgttggcgt ttacaccttc gcatgccacc ggaaaagggt ggccgggact gcaaaacccg
    26161 agctgacttg ttgtatacgc ttgccagccg gcgtcgcttc gcgcggcgcc ggctggcatt
    26221 ccgttcgcgt tccatggcgg gcggtgcgtg gggatgtgcg caagcacatc cgcccgaact
    26281 aagtcagccg ggtttttgca gccacgtatc gcccgccgcc tttgtccggc ggcatcaccg
    26341 tgttccttgc atggagaatg cccatgaaga cgtctgatac ttccttcccg cccaccggtc
    26401 acgccccggc caatgccgat gtggcaggcg agcccatcac cttcgtcgcg cagttgtgtg
    26461 gcatcgacag cgggggcgca tccgatggac ggccctggcc cgaacgccag ctcaatcccg
    26521 gccgttgcat ggccctggcc gatgccgatt gcgcattggc cgggctgcgc accgtacatg
    26581 ccattctgct ggctgccgag cgggcgcggc aggatggcgg gccggaccag gatgtgggcg
    26641 accacgtgat cgagggtctg atccaggcca gtcgcgcgct gggcctgtat gccggcctta
    26701 acgtgcggcc ctgctgactc cgggccgtgt ggcggggcag ggcggctgcc ttgtcccgtt
    26761 gctgccattc actggcagtt gccggggcgc caggcacaaa aaaacccgga ggactgttgt
    26821 cttccaggct tcttggtgac caccaaagtg gtcggggaga caggattcga acctgcgacc
    26881 tctacgtccc gaacgtagcg ctctaccaga ctgagctaca ccccgaaggg agccgcctat
    26941 tctagcgatt caccccgatg gcggcaaggg gtaaatgctg ttttcttcac actgccgaag
    27001 cagtgccact tcagggaaca aaaaagcctg gacgacttca ccaggcttca atgcgaccac
    27061 atgagtggtc ggggagacag gattcgaacc tgcgacctct acgtcccgaa cgtagcgctc
    27121 taccagactg agctacaccc cgaaggagcc gcctaagata ccgtgtgaag gccaaggcgg
    27181 caaggctttt ttacgactca gtgacgattt tccttctcga tacggttctg ctcgcgggct
    27241 tcgaaccaca tgccgttgag gatggccacc gtcgaggcga ggccggcacc gagaatccag
    27301 gcgaaatacc acatgttcaa tctccttcat tccgggtagg tgccgaccgt tggtcggcac
    27361 acgtgcaaga tcaatacgcg ttcgggttgt tgcccatctc ttcgctggtg gtcttgccct
    27421 tcagcacgcg gtacacccag gtggtgtagg cgaggatgat cggcaggaac accgccgtgg
    27481 ccagcagcat gatccacagg gtcaggtggc tggacgaggc atcccacacg gtcaggctgg
    27541 aggtgggctg gctggaggac ggcagcagga acgggaagat cgcaaagccg acggtcagga
    27601 tgatgccggc gatcgctgca cccgaggcga tgaaggccag gccgccgcga cgggcacgca
    27661 gcagcaccgc actggccagc aggccggcca ggccgagcag cggggccagg atcgtggcag
    27721 gcatcgtgct gtagttgcgc atccagccac cagcggcgcc gagttcggcg gtcttcagca
    27781 gcggattggt ggcgccatcg gtgaccacct gcgaggtgat ctggtaaccc ggcaggccga
    27841 aggccaccca ggcaccaccg accgcgaaca gcacgaaggc gatgattgcc gcgatgctgc
    27901 cgaagcgggc tgcacgttcg gccaccgggc cgtcggtctt gatcaccagc atggcggcac
    27961 cgtgcgcgac cagcatcgac acgctgagta ggccggccag cagcgcgaag ggcatcaaca
    28021 ggccgaagaa cgagccggtg tagaagatac gcatgctgtc atcgaagtgg aacggcacgc
    28081 ccagcaccac gttgcccacc gccacgccca tgatcagcgc cgggatgaag ccgccgatga
    28141 acagcgccca gtcccaggtg ttgcgccagc gttcgctggg catcttgctg cggaacttga
    28201 aaccgaccgg acgcaggatc agcgcgaaca ggatcacgaa catcgccagg tagaacccgg
    28261 agaagctgac cgcatacagc ggcggccagg cggcgaagat cgcaccgcca ccgagcacca
    28321 gccacacctg gttgccttcc cagaccgggc cgatggtgtt gatcaccagc cggcgctcgg
    28381 catcgttgcg ggcgacgaag ggcagcagcg tgcccacgcc caggtcgaaa ccatccatca
    28441 cggcgaagcc gatcagcagg atgccgagca gcagccacca gatcacgcgc agcgtggtgt
    28501 agtccagaag aatgaaatcc atcgtggttc tcctgcctca ggcctggccg gcgacgggcg
    28561 ccgaggcatt gtgggaagca tgcggctggg gcgactgcag cgacggcagc acctcatccg
    28621 gacccttgcg gatcgccttg agcatcagct tgatctcgac cacgatcagc gcggtgtaga
    28681 tcgcggtgaa gccggccagg gtcagcacga tttcgtgcag ggccaggccc gatgctgcat
    28741 agaaggtcgg cagcacgcca tcgaccgccc acggctggcg accgtactcg gccacgaacc
    28801 agccacactc gatggcgatc cacggtgccg gcagcgtcca cagggccacc ttcaggaacc
    28861 agcgcttgtc ctggaagttg ttgcggcagg agtagtagaa ggccagtgcg aagaaggcga
    28921 tcaggtagaa gccgagcccg gccatcacgc ggaaggtcca gaacagcggc atcacgcgcg
    28981 gcacggtatc catcgccgcc tgcgagattt cctgcggggt ggcgttgagg atgtcatcgc
    29041 ggtagcgctt gagcagcagg ccgtggccca ggtcctgcca gtggcgatcg aacatctcgc
    29101 gcgcttccac gtcgttcttg ttggcgcgca ggcgttccag tgcgccgtag gccagctggc
    29161 cgccgcgcac gcggtgttcg gcacgctcga ccagttccag aatgcccgga atcggctggt
    29221 tcaacgagcg ggtggcgatc aggcccatca ggtacgggat cttcaccgcg tagtcgttct
    29281 ggtgggtctg ctggttgggg atgccgaagg cggtgaagtc ggccggcgca cgctcggtct
    29341 cccacatcgc ttcgatcgca gccagcttca tcttctggtg ttcgctggcg gcgtaaccgc
    29401 tctcgtcacc cagcaccacc accgacagcg aggacagcag gccgaacgct gcggccaccg
    29461 cgaacgagcg acgggccagg tccttgtgct tgttgcgcag caggaacagg gcgctgatcg
    29521 ccatcacgaa caccgcaccg gtcacgtaac cggcgctgac ggtgtgcacg aacttggcct
    29581 gtgccaccgg gttgaacacc accgccatga agtcgacgac ttccatgcgc atggtttccg
    29641 ggttgaacac cgcaccggtc gggttctgca tccagccgtt ggcgatcagg atccagatcg
    29701 ccgacaggtt ggtgcccagc gccatcagcc aggtcaccat caggtgcttg accttgctca
    29761 ggcggttcca gccaaagaag aacaggccga cgaaggtggc ttccaggaag aacgccatca
    29821 ggccttcgat ggccagcggc gcaccgaaga tgtcacccac gtagtggctg tagtaggacc
    29881 agttcatgcc gaactggaat tccatcacga tgccggtggc gacgcccatg gcgaagttga
    29941 tgccgaacag gacgccccag aacagggtca tcctgcgcca gatctccttg ccggtcatca
    30001 cgtacacgct ctccatgatg gccaccatga aggacaggcc gagggtgagc ggtacgaata
    30061 ggaagtggta catcgcggtc agcgcgaatt gcagccgcga cagttctacg actgtctgat
    30121 caatcatggc ctggctacct cgttggatag tgccgttgca ggtggcggga agggtggtct
    30181 acgacgtgaa tgatgtgacc gactacttca aacagccttg atccagatca atgtatgaac
    30241 aggtgacccg gttgatcgta tgccaacctg atgaagactg cgaccgccgg ccgcaggggc
    30301 cggctattgc ctgcgcctac aatgccgtgt ctcccccgct gcccgtgaag acctcttgag
    30361 cgctgccgaa acaacccccg acggcctttc ccaggaagcc gaaacgaccc gccagcggcg
    30421 cgcccgcact gcatggctgg ccgatctggc gcggccagcc cgcggccgcc agcgcctggc
    30481 ggcgctgtgc atcagcctgt ccggggcgct gttgatcggc caggccgccg ccattgcctg
    30541 gctggtgcag caggtgctgg tggaacgcgc gccgctggca tcgggcctgc cggtgctggg
    30601 cggactggcg ctgatcctgg tgctgcgcac gctgttgggc agcgccaccc aggccgcggc
    30661 cggcgatgtg gccgatgctg cgcggctggc actgcgcgaa cgtgtgttcg cgcgcctgct
    30721 gggccatggc ccgctgtggc tgcgccagcg ccgcaccggc gagctgggcg aactggtgct
    30781 gcatcacggt gatgcgatcg agaattatta cagtggcttc ctgccggtac gcaccgaggt
    30841 ggtggtggtg ccgctgctga tcctggccgc cgtggcctgg gtcgactggg tggtggcgct
    30901 gatcctgttg ttcaccgcgc cgctggtgcc gttcttcatg atgctggtgg ggtggggcgc
    30961 tgaagcggcc ggtcgtgccc agctggggga actggcgcgg atgagcggcc acttcgccga
    31021 tcgcatcaag ggcctgggcg tgctgcgcct gtacggccgt ggcgaagccg aactggctgg
    31081 cgtggaggcc gccgccgaag gcgtgcgcct gcgtaccctg aaggtgctgc ggatcgcgtt
    31141 cctgtcatcc acggtgctgg aattcttcgc ctcggtgagc gtggcgatgg ttgcgctgta
    31201 cctgggcctg agctacctcg gcatgatgtc gttgcatgca gcggtgccga cgctgggcgc
    31261 cggcctgttc tgcctgctgc tggccccgga gttctacgcc ccgctgcgac ggttggccgc
    31321 gcactaccac gaccgtgcca acgccctggc ggcggccgcc gaagtggagc gcctgctgca
    31381 gtcgctgccc gacgaacagg gcctgctcga caacgagggc gccgcgctgg tggtggagcc
    31441 ggccgaggcc gccttgccgc cgctgcgcgc gcaaggactg gtgctgcgtc cgctgggcgc
    31501 accgcacgat gtgctgcagg atctggatgt actgctggag ccgggccagc ggctggccct
    31561 ggtgggcccc agcgggtctg gcaagagcac gttgctggaa gcgctggccg gctggttgcc
    31621 gccacgcgcc ggcaagttgc agctgcgccc cggcgtgcag gtggcctatg ccagccagcg
    31681 tccctacctg ttccacggca gcattgccga caacctgcgg ttggccgacc ccggtgccag
    31741 cgatgcacgg ctgcgtgcgg tggccgaggc ggcgcaggtg ctgcagttcg cgcaacgact
    31801 gccgcagggg ctggacacgg tgatcggcga gcgcggcttc ggcctgtccg gcggtgaagc
    31861 gcgccgcatc ggcctggcgc gcctgctgct gcgcgacccg caggtgctgc tgctggatga
    31921 gccgaccgcc ttcctcgatg ccgataccga agccgcgctg ctgcgcagcc tggccgcgta
    31981 tgcgcggggc cgcagcgtgg tggtcgccac ccacagccca gccgtgatcg cctgggctga
    32041 tcgttgcctg ctgttgccgg aaggccgcct ggtcgagccg gcacaggcgg tgcgcgcatg
    32101 agccggtcgc ccgattcact gcgtgcagtg ttcctgcgtc atcggccgcg cctgctgctg
    32161 acgatgctgc tgctgtggac cacgatgctg gctggtaccg cgctgctggg cctgtccggt
    32221 ggcttcctca ccgcggccgc gctggccggt gcggccgggt tgggccaggg tttcaatttc
    32281 ttctcgccct cggccggcat ccgtggcctg accatggcac gcatcgtgtc gcgctatttc
    32341 gaaaagctgg tcggccacga tgccaccctg cgcatcgccc gcgacctgcg cgtgtggttc
    32401 ttccgccgtg cgctgccact ggcgccggca cggttggggg ccacgcgtac cggcgacctg
    32461 ctggcacgcc tgctcggtga catcggtgag gtggatggcc tgctggtgcg tgccatcggg
    32521 cccttggtgg cgctgggtgc gttgtcgctg gtcgcggtgg tttcagcggc gctgatcctg
    32581 ccgtcggcgg ccgtgctgct ggcggtgctg gcattgctga tcgccgtcgg tgtgccgtgg
    32641 ctgggcgtgc gcggtcgcga tgatgaagaa gcagaccgcg ccgcgcatcg cgccgcgttg
    32701 cgcaccgctg cattcgaagg actggaaggg gccggggatc tggccgcgct gcatgccgat
    32761 gcggcgtggc agttgaaggt gcgggtagcg gccaagcagc tggcctcgcg cgaccgtcgc
    32821 cggcgctggc gcctgattgc aggctcgacc ctgcatggcc tggtggctgg gctcggcctg
    32881 gtggcgatgc tggcattggc cctgcatgcg gccgaacagc agcgcatcgc gccggaaatg
    32941 gccgccggcc tggtgttcct caccgtggcg ttgatcgagt tgtgggcggg catgggcctg
    33001 gcctggcagt cgctgcagtc cgggcgcatc gccgccgatc gcttgcaggc catcgtcgag
    33061 cagtcgccga cggtggagga tccttcgacg ccgcacgctg taccacaggc ggcgcgcgtg
    33121 cattgggatg atgtccattt ccagtggccg ggcgcggcgc ggccggtgct gtccggcctg
    33181 cagctgaccc tggcaccggg cgagcgcatc gcgatccgcg gcgacagcgg cagcggcaag
    33241 accaccttgt ccagcctgct gctgcggctg tgggatccgc agcaggggcg aattacctat
    33301 ggcggccgcg atctgcgcga tttcgcccag gccgagtggc atcggcagct ggcgtggctg
    33361 ccgcagaacg cgccggtgtt tgccggcacg gtggccgaga acctgcgatt gggtgatccc
    33421 gacgccagcg acgtcgagct gtgggcagta ctacgtcggg tacgcctggc cgaatgggcc
    33481 gagcgcaatg gcggcctgca ggcctgggtc ggtgagaacg gtgcgacgat gtcggccggg
    33541 caggcgcggc gactggcgct ggcgcgcgcg ctgttgcgaa atgcgccgat cctgttgctg
    33601 gacgaaccga ccgaagggct ggacgtggat accgcacgcg cgctgctgca ggacctctcc
    33661 gggctgctgg acggtcgcag cctgctgatg atcacccacg atgatctgcc cgacggcgtg
    33721 gtcgatgcgc agtaccggtt gcgtgacggg gtgttggagc gcgaag
//
LOCUS       DAOKIP010000024        31706 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.024,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000024 DAOKIP010000000
VERSION     DAOKIP010000024.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 31706)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 31706)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..31706
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.024"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(51..389)
                     /locus_tag="QEL58_001027"
     CDS             complement(51..389)
                     /locus_tag="QEL58_001027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019185257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-II family nitrogen regulator"
                     /protein_id="HDS1675527.1"
                     /translation="MKMVMAVIKPFKLDDVREALAERGVTGITVTEVKGFGRQKGHTE
                     LYRGAEYVVDFLPKVKLEVAVTDDQVEAVVEAIVKAAGTGKIGDGKVFVYDLGSVVRI
                     RTGELDADAL"
     gene            544..795
                     /locus_tag="QEL58_001028"
     CDS             544..795
                     /locus_tag="QEL58_001028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005411375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="accessory factor UbiK family protein"
                     /protein_id="HDS1675528.1"
                     /translation="MIDLNHIDDLARRLSDLVPPGLRESREELQATFKSALQAGLAKL
                     DLVTREEFEVQRAVLLKTREKLDALETAVRELEGRSAAE"
     gene            921..1355
                     /gene="arr"
                     /locus_tag="QEL58_001029"
     CDS             921..1355
                     /gene="arr"
                     /locus_tag="QEL58_001029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012512354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+)--rifampin ADP-ribosyltransferase"
                     /protein_id="HDS1675529.1"
                     /translation="MAQDTEWTPVSHDTCDQVAGPFYHGTRADLAVGELLSAGFRSNY
                     RDSVVMNHIYFTTIAKGAGLAAEMARGEGRPRVYVVEPTGPFEDDPNVTNKKFPGNPT
                     RSYRSAQPLRIVGEITEWELYDAEFVRQLRAFVASGSGEIIN"
     gene            complement(1476..1832)
                     /locus_tag="QEL58_001030"
     CDS             complement(1476..1832)
                     /locus_tag="QEL58_001030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005419991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675530.1"
                     /translation="MIDLPCPSCGFLTLEDCYGSFAICPICDWEDDGVQLANPTSAGG
                     ANGESLAQAQQNAVSRLPLGVQVASGFRRGNSWRPLSSAEIGRYEALRGGKHWHSKAV
                     SHEGDAYWLSLGVLSI"
     gene            2472..3137
                     /locus_tag="QEL58_001031"
     CDS             2472..3137
                     /locus_tag="QEL58_001031"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675531.1"
                     /translation="MRPLSKEEEASVSGGRTYKTPAGNTVKFNASLSDAQAATLGQIV
                     DYGKAHNMLAPEIRMAVNQAFYESSLGSMTSNPTNSNVQGLYQYDASTWDYLGHGALD
                     RSSTNDQIAAMYDDIRNFESRWAAGRQAGTIPTTLLIDDYVEIKHHLGPNSTQWSSPV
                     VSDYNGKVTVLGFTSVSAGTTAPPDGSTGGAGSGGHSGGGGGGSSGGTGGTVIVGPPQ
                     RQP"
     gene            3167..3655
                     /locus_tag="QEL58_001032"
     CDS             3167..3655
                     /locus_tag="QEL58_001032"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675532.1"
                     /translation="MKAKLATCVLAGVLMSTGASAAECGSAVAEYVYSGNPALHARIQ
                     PLTMPGTGNTLGVTLEDRSRGFKAWFIADKGSGSYSSLVYVDDFTQPSWHQPDPDAPR
                     AIRDMPIFGWDQSLHVNEDLRNLKSAPQFLFVPDLAEVVSHGIEQPFPLTQGIFNRIS
                     CR"
     gene            3725..4975
                     /locus_tag="QEL58_001033"
     CDS             3725..4975
                     /locus_tag="QEL58_001033"
                     /inference="COORDINATES: protein motif:HMM:NF024829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family efflux transporter periplasmic
                     adaptor subunit"
                     /protein_id="HDS1675533.1"
                     /translation="MELFRKEAETAHADQFGAVIVSTPKAHFAAGVSATALCLAALVL
                     SFHAHYARREQVSGHLVTDTGESRILARRSATVSEVYVREHQHVRKGDPILRLSSEMH
                     TRGGAVHARVEEDIVNQITSVHASVAATEAALISEQHQLRERVKSLLAQASDLRQQIG
                     YQQQAAEQKQRTLTKLRPLLKDGFVAEYQVQDLESALLDTRAQTSGLHRQLEEISQQQ
                     RETSRKLTSLEIDSELKLNDLRREQARLRTSLAQDQSELELVVRAQSDALVSSVLVQP
                     ENYVEPGQPIASLIPTPTTLKAEIFIPSTAIGFVHRGTKVAMHYAAFPYQKYGVQYGV
                     VEQVSETPTQPAQLSALLGQQPPAQPMYRAIASLERQQIVTDGQQRALVPGMQLEAAL
                     LLEDRSIIAWLLEPITAFRASIQD"
     gene            4978..7128
                     /locus_tag="QEL58_001034"
     CDS             4978..7128
                     /locus_tag="QEL58_001034"
                     /inference="COORDINATES: protein
                     motif:HMM:NF012235.1,HMM:NF012869.1,HMM:NF015377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase domain-containing ABC transporter"
                     /protein_id="HDS1675534.1"
                     /translation="MQVANSTAVSPKPGDLLRQWMKRPVKIFYQSEANECGLACLAMI
                     LDHHGHRLSLEQLRAFAGSYPQGMSVSDISDVAERKGLVARPLRAEPDELDQLVLPAV
                     LHWNMDHFVVLEKVKARKVVILDPSQGRVEISWAALGRHFTGVAIELLKGPDLRKAQA
                     RSSLRLRSLIGPISGLRPALVNLGLLSVALELMALASPQGFQIVIDRVLADGDRALLP
                     VVIVGLSLLALLQLLLGWLRSWAIVWLSSQINIGWSSGVFARLLRLPTQYFQSRSLGD
                     ITSRFTSLNTIQQAISTQLVAGILDGVMALATGAMLFVYSPLLGAFTSLTALAYVGVR
                     AIYVKRLQHATVSSLTEDARRQSMLLESIRGAQTLKLFGKTGWQSSRFANRSAAAIAA
                     SIAVQRTSLSYASWGGVLLSVGRLGALAIGASLVMEGRFTAGMLIAYASYSEQFISRL
                     SALSEYAIQLALLGSHAERVADIALAPVEKEPAAPLSARVQPVEVELRNVCFRYADNQ
                     PWVLNNASAIIPAGQMTAITGASGTGKSTIAKLLVGLLTVNSGEILLNGIPLSHLGPT
                     QARRMFGCVMQDDALFHGSLAENIALFQEGAPQQQIEHSAQAACIHDDISRMPMGYRT
                     SVGDMGSTLSGGQRQRIMLARALYQQPQALLLDEATSHLDAETEQSINAHLKQMSLTV
                     IQIAHRFETIDAADCLLRVHPDGSVSRRGRAAAY"
     gene            7407..8267
                     /locus_tag="QEL58_001035"
     CDS             7407..8267
                     /locus_tag="QEL58_001035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014038787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OST-HTH/LOTUS domain-containing protein"
                     /protein_id="HDS1675535.1"
                     /translation="MSVIDPNDIAGAQHEVQRLVGRCILRLQQCEQLMKSMLAFQKLS
                     GTPETLPKSLNNRRTEIGGKTMGALVGCLTTECMLKEGGEVPDVPSGLDHDSSPFGLH
                     IGINLPGESHAALRTDLRALVNLRNTLVHHFFEQYDIRTIDECVKAQDALRHACTEID
                     RQFEQLRTLAAVMAQGMTAFAELVQSPEFHDFLVNGIAPDGQIHWPIAGIVSALRQAF
                     RERAIDGWVNLDTAALWMAEHHPEQTPGKYGCAQWLDVIRDSRQFELRDFAHNGQRGA
                     WFRERPESTG"
     gene            8737..9093
                     /locus_tag="QEL58_001036"
     CDS             8737..9093
                     /locus_tag="QEL58_001036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005419998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675536.1"
                     /translation="MTKPHSPPPRPIQQPPSPGPALDPTSLIAVLHAIGAGAAADGQP
                     WPERHQLRSRQIALSDADCAATGQRIVQEILLAAERTRQNGEPEQYVGDRVMEGLVMA
                     DIALTAFIHERMRPRD"
     gene            complement(9217..10428)
                     /locus_tag="QEL58_001037"
     CDS             complement(9217..10428)
                     /locus_tag="QEL58_001037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019337768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HDS1675537.1"
                     /translation="MHMYVPKTLVALIAAAALAPVDSASAQALVKGGGASMPASLYKG
                     ATDNILPAEFSYVVLGSGNGKRAFLNNEPALLQTTGTVHYAGSDAVLTSTELAAYNST
                     YNSYGSGNAYGPLIQIPVALAPIIVPFNKPGGVLDLTVSQLCGVFSGRITRWDQLPAG
                     GRTGQITVVYRAESSGSSEILTRFLTAACQTSDVSGTTLKSSGWGLVPSFSVQPTFAN
                     LFVGNTVPSNFMAAPGPGDVALYNAVLVGDGRIGYTGPDVVANLSDATKVATVKGYSP
                     AEVSLQATIETASPPTGAAANDPANWVPVFGNPSAGYPIVGLTNLIIGQCYQNRMVGN
                     SLRSFLLTHYGSAQVGGVEQGRNDAAVRSHGFYPLPNSWRNAIRTRFALAGNAAGLNN
                     PAVCNGIGRPL"
     gene            10700..12199
                     /locus_tag="QEL58_001038"
     CDS             10700..12199
                     /locus_tag="QEL58_001038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012512362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YifB family Mg chelatase-like AAA ATPase"
                     /protein_id="HDS1675538.1"
                     /translation="MSLALVHSRARAGVDAPLVRVEVHLSGGLPATQIVGLAETSVRE
                     SRERVRAALLCARFDFPQRRITLNLAPADLPKEGGRYDLAIALGILAASGQVDPQALL
                     QYEFLGELGLTGELRPVAGALPAAIAAAEAGRILVVPPGNAAEAALAEHADVRVARTL
                     LECCAGLGNPRLLPPVERVDTTPLPLPDLADVRGQAHARRALEVAAAGGHHLLLIGSP
                     GCGKTLLASRLPSLLPDTEEAEALQLAAIASVSGEGLDPRRWRQRPFRAPHHSASAAA
                     LVGGGNPPCPGEISLAHHGVLFLDELPEWNRSALETLREPLESGHIRIARAARSVQYP
                     ARFQLVAAMNPCPCGWAGDRSNRCLCTDERITRYRARVSGPLLDRIDLHISVARMDAV
                     ELRESTPLGEPSASVRERVEAAHARQQARGGLNAHLPPAALRACTRLSEADQDVLEQA
                     IERLQLSARAMHRILRVARTIADLAGCEAIQTAHLSEAIGYRQLDRGKP"
     gene            complement(12479..14797)
                     /locus_tag="QEL58_001039"
     CDS             complement(12479..14797)
                     /locus_tag="QEL58_001039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014038793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDS1675539.1"
                     /translation="MNTPPTTRLALAIITVIATPAYAAESSDTAHDTPTTLNALQVIA
                     TPRGAAVAPTQVVGPNRYIIKAEDLDAMVTGNNGLAMLKQVPGASYTATDGLGLDISA
                     TSLFVRGFRMNEMGITFEGVPLNDNGFLSLTGTSVVNVGVPDGIGAITVSPGGAPVSV
                     FSSSVNGGSLEYRLRELQDTPSLRVKQGVGSNSTLVTTVSGQSGQLGEHGPKVLVDLQ
                     RVSADKYQGEGTQNFLRGDLKLQQDVAWGDFTVFLSDSKAKVWGYNNISFDMIRKLGW
                     KADIFYPDYAWAWYVASPENADKSCGAYTCGELSELIPYDTGQTTRDRVSSINHRFQI
                     TPALSGNVQLYNANSHTQATLTDPTVPSPNGAPFSEQVQTPRVNRLGGMLNLQFETGA
                     HTFTAGVWQEKSKAAAKTEWYQQPLLGEGPPLKATGPFDVYGPAFKTDNASSWVTRSR
                     QFYLQDDIVLNDTLKLGVGFKAVDFRTSGGGLGDAKDRPVNGTLRAKSNFLPHVSLFW
                     SPTESTDAFIDLANTMNGYRVAQRGNIGYTASAWTITDQEEFDRVAGTLRPEKNWNLT
                     LGASHRFDRLTITGDVFYSDIRNRLLSAAIGTQFAQINTVRLMPKMHVIGADLGITAD
                     LTDHLQFYQGVAVARSYYDSDFVVGDTVYPIKGNAQPGYPQISLVSDLSAHFGDWRFG
                     ATSTSYLRQPFTYENDIRVPTFWQVNTYAAYRFGADSAVPGLELRLDVSNLFNRHNIG
                     TATIAGSSFSGDYQTLQRSAPRQLMFSTSMTF"
     gene            complement(15133..15966)
                     /gene="yidA"
                     /locus_tag="QEL58_001040"
     CDS             complement(15133..15966)
                     /gene="yidA"
                     /locus_tag="QEL58_001040"
                     /EC_number="3.1.3.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010482102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar-phosphatase"
                     /protein_id="HDS1675540.1"
                     /translation="MDMGRRQSTIELVAIDMDGTLLDPAHQLTARARQAIAQARALGV
                     HIVLTSGRPVPGLAPFLHELGITGDDDYCIACNGGLVQRIGTRETVVEYPLSFDDFLF
                     CEQVARDLGVHFQALDSQRMYTPNQDISYYTVADSHLSRMPLSYRRVADMDPSMSFIK
                     LMMIDAPDVLDAAIARLPTELTERFAVLKSAPFFLEVFDHRAGKGPSLQKLAEHLGID
                     RANVMAIGDQENDLTMLQYAGTSVAMGNAIDAVKAVARFETTSNADEGVARAIERFVL
                     Q"
     gene            16116..16778
                     /locus_tag="QEL58_001041"
     CDS             16116..16778
                     /locus_tag="QEL58_001041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005420011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exopolysaccharide biosynthesis protein"
                     /protein_id="HDS1675541.1"
                     /translation="MTYRAPETNDSAPLAQQIEQMIDELPGEQVSVGTLLSALGDEGL
                     LLIVILLSAIFIIPVSIPGLSTVFGASILLIGLSRVRNRPLWVPQKLARREIATDKLK
                     ANLGRALKWVHRMERLSRPMRLAVMVRSKKMMRLNNLMLVFATLLLMAPAGPIPFSNT
                     LPALALMSFAIGFIQRDGAAVAAGYGFVVATVVYFGVLLGGVGFAAESVFSGLRSGPS
                     EP"
     gene            complement(16917..18227)
                     /locus_tag="QEL58_001042"
     CDS             complement(16917..18227)
                     /locus_tag="QEL58_001042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sorbosone dehydrogenase family protein"
                     /protein_id="HDS1675542.1"
                     /translation="MAKHILPTVAALAMAVTLSACAGKAEYHPADQSGTKPPLPAPKN
                     FLMPPMQVPKGVGWAEGQSPTVADGLKIERIAANLMHPRRLLTLPNGDVLVVEGNGPG
                     EEPVTTPKQWIAGKVKARSGKAGKGGNRVTLLRRTPGTTTWTQHVYIEGLHSPFGIQL
                     IGDTLYVANTGNIMQYHYVPGETRMSDKGREFTDLPSTINHHWTKELLASRDGSKLYV
                     GVGSNSNITENGLAVEYRRAVVLEVDVATRGSRIFASGIRNPTGLDWEPSTGKLWAVA
                     NERDEIGADLVPDYLTSVKEDGFYGWPYSYYGQHVDERVQPQRPDLVAKAIVPDYAIG
                     SHVAPLGLLFYTGQALPAQYHGGAFIGEHGSWDRSPLSGYEVVYVPFKDGKPTGRPQT
                     VVGGFTSKDEKTLMGAPVGMAMDAEGALLVADDVGDVVWRVSAK"
     gene            complement(18220..18660)
                     /locus_tag="QEL58_001043"
     CDS             complement(18220..18660)
                     /locus_tag="QEL58_001043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012512368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675543.1"
                     /translation="MVNPLAQAHRGPGTTLFSLLNPIPFGFFVGALIFDAIYLNSAEV
                     MWGKAAAWLITFGLLIAIVPRLINLFAVWRRNGTATRIDRIDFFLNLVAVLLAIWNAF
                     VHSRDAYAVAVPGTILSALTVALIALGLILLSLQPPVLQGGRHG"
     gene            19064..19333
                     /locus_tag="QEL58_001044"
     CDS             19064..19333
                     /locus_tag="QEL58_001044"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675544.1"
                     /translation="MSTTTVPAKLAPSLHTLLVAAPFNATSRSIQYGIQYQIEGGIVC
                     NIHHSDKRRDIVKITLQNVDANQEIAAQLRFFIENLANGTQQEGP"
     gene            19330..20091
                     /locus_tag="QEL58_001045"
     CDS             19330..20091
                     /locus_tag="QEL58_001045"
                     /inference="COORDINATES: protein motif:HMM:NF021640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide-binding protein"
                     /protein_id="HDS1675545.1"
                     /translation="MIFRGTLENLIVQVELSGEISEVRESGAGHQLKMVDGAILNWYP
                     TTGTISFQGSKSASDALRTRLEQTLSLPASNAPKSSSSSVSEVAPAKVEAKGKVFVVH
                     GHDQATREQLELILHKLGLDPFVLQNTGGGGLTIIEALEKEIGPNPNAEVKFGIVLLT
                     PDDFGYSKQDGAEKNQPRARQNVVLEMGMLLSAIGRTNVAILKKGHMEVPSDAQGILY
                     LPFNDHVKEVVPRLVDRLTNAGFVLDPSSITKASS"
     gene            20661..22439
                     /locus_tag="QEL58_001046"
     CDS             20661..22439
                     /locus_tag="QEL58_001046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014648725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family serine peptidase"
                     /protein_id="HDS1675546.1"
                     /translation="MKRHTQRSAPPRSARLALATALVLGSLVATAQAQQADPLAGIQW
                     HLRNTGQTVPADTLPVAGNDLNVDGLYRNGIRGQGVTIAIVDDGLQIAHPDLAANVAA
                     VAGKNFANGSNNPTPSNPDADNHGTMVGGIAGAVGANNLGVRGVAPAATLKGFNPISR
                     SAQGNQQSNIEYAWWDGAESADVQVFNNSWGAGPGNPNLPLAYSENTIRSYEQALSGT
                     RGGRGGIYVKSAGNNFNNGYWQDNLGNTFDVCTNDTKNRNTGCVPAGRDPRNNLFNVI
                     TVAAVRADGVRSSYSSTGSALWVSAFGGEYGLQAQYAPGLVARAYDPAIVTTDVTGCA
                     QGSNKNTNRENTLDSNQSAIDSTCNYTAKMNGTSASAPMVSGVAALVLEANPNLSYRD
                     VKYILATTATRNHPNQPAVTLADGRTLVPGWTVNAANRAYSNWYGFGVVNAARAVEVA
                     ENFQSLGPLVDSGWRTTTRTVAIGNTSAAAARLTFQLANGARNIESVQLGFRVNHRNT
                     RQLQFVLVSPSGTRSVVQPAFTAIGSGTGNAQSNFTSWDLLSSNAFLDENATGTWTLE
                     VTDMGQAATAASRGNLESFKIRVLGH"
     gene            22439..23014
                     /locus_tag="QEL58_001047"
     CDS             22439..23014
                     /locus_tag="QEL58_001047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014038800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA breaking-rejoining protein"
                     /protein_id="HDS1675547.1"
                     /translation="MMKKTILLSTLAFAAMTSPAWAQSSGQTPPARTPSTVDAQELKA
                     SATGRSFDVGGTRFQLSPTTTVKQVSGGRFTITSQAAATSTRTKRSLDGAAAAPADAG
                     AGKFAAAVSHDGAPVVATSRVKVFFTDAAAAQRAASATGGSVVKVSKASGQAIVEYPS
                     VNAALDATTKLLSTAGIRATEPDVVQWEETK"
     gene            complement(23103..23783)
                     /locus_tag="QEL58_001048"
     CDS             complement(23103..23783)
                     /locus_tag="QEL58_001048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005411472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCO family protein"
                     /protein_id="HDS1675548.1"
                     /translation="MKGIAFPHRGLRLAAGMLLGLLAGCSAQSRMDFYSKDIACEELG
                     QHWSMPDSHGTVRGPADLQGQVTYLFFGFTSCPDVCPTTMVELSQVKHLMGKDADQLQ
                     VVFVSVDPARDTPEVARTYVEAFDRKAVALVGNEAQLAAMASDFKAFYEKEPGQVPGT
                     YTMSHIAGGYVFDRQGRLRLFAPYGMPVEKLFSDVQRLLLEPAHPAAGSDPLASCSLS
                     HNGTLAAR"
     gene            complement(23795..24127)
                     /gene="cyoD"
                     /locus_tag="QEL58_001049"
     CDS             complement(23795..24127)
                     /gene="cyoD"
                     /locus_tag="QEL58_001049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008268101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome o ubiquinol oxidase subunit IV"
                     /protein_id="HDS1675549.1"
                     /translation="MAHVETSRAGNAHGSTTSYLIGFVLCALLTVVPFALVMNPVLSR
                     PLTLFLLVGFAVAQILVQLVFFLHMDRKSEGGWNLASFVFTLVILFIVVALSVWIIWS
                     MHYHMMIN"
     gene            complement(24129..24740)
                     /gene="cyoC"
                     /locus_tag="QEL58_001050"
     CDS             complement(24129..24740)
                     /gene="cyoC"
                     /locus_tag="QEL58_001050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001739260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome o ubiquinol oxidase subunit III"
                     /protein_id="HDS1675550.1"
                     /translation="MASDTQAHEDHHAHDHSHEQGGMKVFGMWVYLMSDLVLFGSLFA
                     SYAVLSTAYAGGPTGKDLFSLPFVMAETFLLLVSSITYGQAVLAMHRHDASAVLRWLG
                     VTFVLGASFIGMEIYEFSHLIHEGAGPSTSAYLSAFFALVATHGLHVASGLIWMAVVM
                     HQVYRRGLTPTNITRVSCLSLFWHFLDLVWICVFTFVYLIGAF"
     gene            complement(24761..26737)
                     /gene="cyoB"
                     /locus_tag="QEL58_001051"
     CDS             complement(24761..26737)
                     /gene="cyoB"
                     /locus_tag="QEL58_001051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015472398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome o ubiquinol oxidase subunit I"
                     /protein_id="HDS1675551.1"
                     /translation="MLGKLTWEAVPLHEPIVVVTLAAMVLGGLALLGAVTYFKLWGPL
                     WRDWFTTVDHKKIGIMYVVVALVMLVRGFADALMMRAQLAAAGPGSDGFLPPEHYDQI
                     FTAHGVIMIFFVATPFVVGLMNIIVPLQIGARDMAFPFLNAFSFWIFVVGAALMMISL
                     GVGEFAMTGWVAYPPLSGIEFSPGVGVDYYIWALQASGIGTLLTGVNLFITILRMRAP
                     GMTLMKMPVFTWTVLVTSVIIIAAFPILTVALGALTLDRYLDFNFYTNTLGGNPMMYV
                     NLVWAWGHPEVYILVLPAFGIFSEVTATFARKKLFGYKSMVGATLAIGILSFIVWLHH
                     FFTMGSGASVNAFFGIMTMIIAIPTGVKIFTWLFTMYGGRVEFSVPMLWTIAFLVTFT
                     IGGMTGVLLAIPGADFLLHNSLFLVAHFHNTIIGGALFGYLAGFAYWFPKVFGFTLNE
                     RLGKWSFACWVIGFYLAFMPLYMLGFMGMTRRMNQYDNPAWTPYLIAAFIGALFVFAG
                     IILMLVQIYVSVRDRKRNLDLTGDPWNARTLEWATPSPPPFYNFAVVPKADELDAFHE
                     AKKRGLPPPPKKYAPIHMPKNTGVPLILNIWILVLCFALVWHIWWMAAASFIAMIVTL
                     IVRSYDEDVDYYVSSEEVARTEAANLAKLKEVRA"
     gene            complement(26743..27648)
                     /gene="cyoA"
                     /locus_tag="QEL58_001052"
     CDS             complement(26743..27648)
                     /gene="cyoA"
                     /locus_tag="QEL58_001052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005420037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinol oxidase subunit II"
                     /protein_id="HDS1675552.1"
                     /translation="MNICWNRIRLALVALACVGLSGCDWVLLDSKGMVGLAQRDLILI
                     CIGLMLIVVIPAIVLTFVFAWRFRAGNTKAKYTPDWSHSTKVEIVVWGVPLVIIAVLA
                     VIVWQSTHELDPYKPLDVAGEPLHVDVIATDWKWVFVYPDLGIATVNQLNFPANRPLA
                     FNITSNSTMNTFFIPQLGGQIYAMAGMRTQLHLIANEPGQFRGMSGNYSGHGFSNMKF
                     IATASSNEDFERWVAEVRSAPQALDFNQFKALAAPSKNAPVQHFSSVEPLLFKKVINQ
                     FIGVGENTAAATPAGAAGGAQVSQE"
     gene            27832..29247
                     /locus_tag="QEL58_001053"
     CDS             27832..29247
                     /locus_tag="QEL58_001053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005411477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent aminotransferase family protein"
                     /protein_id="HDS1675553.1"
                     /translation="MTPPAAGRRLKHPNRTWVRPFREGAGPLYLQIAQQVREAVDDGV
                     LRPGDRLPPQRDLAQQVGVDLTTVTRAFAELRQAGLLDAQGAGGTFIALSAGNRSTSV
                     DLSMNIPPLLGSAPFAQGMEAGFQHVGQQLGQGELMSYHVGAGTREDRAAAVQWLAPM
                     LGTVEADQVVICPGAQTALCALILARTQPGELIAAEQLTYPGLLAAARVLQRGVVPVA
                     MDAEGMLPDALEEACQLRRPRLLYLVPTIQNPTTATMSAQRRQALLAVAKRHDLTVIE
                     DDPYWLLAGDAAPPLAAHRDAGCPVYYISTLSKCLAPGLRTAYLVVPAGEPMEPVLDA
                     LRAIALMPTQSMVAVASQWIRSGQAQDMVQRFQQELRERQAIAAQYLPSRARAHPAGL
                     HVWLPLPPRLDQYRLIQAAQEQGLGIASSDAFSVEEPPPGNAIRLSLGGAVDQGALAG
                     ALAKLNEILSEAPEARHSAIV"
     gene            29321..29581
                     /locus_tag="QEL58_001054"
     CDS             29321..29581
                     /locus_tag="QEL58_001054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010482119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675554.1"
                     /translation="MRVEKLKFHLVMAGCGGFVVLMLAALAWVCLQPQTVDVQAAERH
                     AIEQCVQRSEDPARSEIQRRAQADSCREMRKQYVHKFGGDAS"
     gene            29581..30183
                     /locus_tag="QEL58_001055"
     CDS             29581..30183
                     /locus_tag="QEL58_001055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014648734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol-disulfide isomerase"
                     /protein_id="HDS1675555.1"
                     /translation="MGAAAPRARRWLLPTMIALACLFMAGVAAALWQYFGYGAQSTFT
                     EQAIVFDDSQLRLPANLAGDTGRIRVVHFWDPACAVCNRETGAHLSYLISMYRRAGID
                     FYAIRRPGTEGELPEPLRSKVIQLPTIDGIEHIPASPAVAIWDRQGHLAYAGPYSIGM
                     VCNSANSFVEPLLDKLVRGETVRPKGLLAVGCYCPWHAPR"
     gene            30193..>31706
                     /locus_tag="QEL58_001056"
     CDS             30193..>31706
                     /locus_tag="QEL58_001056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019336317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent aminotransferase family protein"
                     /protein_id="HDS1675556.1"
                     /translation="MTSPRLAGATAVNNNGGHLPEPTDGYGQAPAVGSNDTPRHAPYM
                     PRPDVAAREWVQDVLAHTGPIYLRIVNSLERTVRRGGLAPGQRLPSQRALALQLGVDL
                     TTVTRAFDEARKRGLIEARGPQGSFIAPPKAGFEQVVDLSMNVPPVPDADALAETLRR
                     GAAAVLARSNAPNLMTYHLGGGNPTDRHAAARWLRPMLGTVDDACLLLTEGAQVALAA
                     ILLSQSRDGDAILCDTLVYPGLLQAAAALGRRLLPVDSDEHGMCPEALARQARESGAR
                     LVYLNPTCQNPTALTLPLQRREALARVLEREGLLAVEDDPYWHLAEDAPTALATLAPR
                     HVFYVATLSKVISPGLRTAFVQCPDAAHAESMTAALRATRLMGHPLVSALASQLLLDG
                     SAQSLLAQVRSEARERMRMARYLLAPSLLQRAEGLHAWCRVPAPWTDATLVRTAQLQG
                     LAIAPSSAFCPPGVLHQNGVRLSLGLAADRRQLESALRRIDRLLLSDALPAIER"
BASE COUNT         5957 a         9961 c        10127 g         5661 t
ORIGIN      
        1 gctcgactct acaaaagccg ctttacagcc cgaatacgca caaaaccagg ttacaacgcg
       61 tccgcgtcca actcaccggt acgaatacgc accacgctgc ccaggtcgta gacgaacacc
      121 ttgccgtcac caatcttgcc ggtgcccgca gctttcacga tggcctcaac caccgcctcc
      181 acctggtcat cggtcaccgc cacttccagc ttcaccttcg gcaggaagtc gaccacgtac
      241 tccgcaccac ggtacagctc ggtatggccc ttctggcgac caaagccctt cacttccgtc
      301 accgtgatcc cggtgacccc acgctcggcc agcgcttcgc gcacgtcgtc gagcttgaac
      361 ggcttgatca ccgccatgac catcttcatc gtctatctcc tgtcttccgg cgtggaggat
      421 agcgcctgaa cgcggcccgt gcgaagccgc tgcggcctgt ccgggcagcg ggtgccggca
      481 gtatccttgt gccgattggc ctgcccgcgc cggatgcacg ggcccacccc cacggagccc
      541 cccatgatcg acctgaacca catcgatgac ctcgcccgtc gcctcagcga cctggtgccg
      601 ccgggcctgc gcgaatcgcg cgaggaactg caggccacct tcaagagcgc gctgcaggcc
      661 ggcctggcca agctcgacct ggtcacccgc gaggagttcg aagtgcagcg cgcggtgctg
      721 ctgaagaccc gcgagaagct ggatgcgctg gaaacggccg tgcgcgagct ggaagggcgc
      781 agcgccgcag aatgaaaaaa ggaggcgcac tgcgcctccc actacagagt atttcgcgga
      841 tggggccttg ccgcaaggcc caccgtgcgc cctagactcg ccggcctgtc gatccggcag
      901 gacacgcagg ggcagtgctg atggcacagg acaccgaatg gacacccgtt tcgcatgaca
      961 cctgcgacca ggtcgccggg ccgttctatc acggcacccg cgctgacctc gcggtgggcg
     1021 agctgctgag cgcgggcttc cgctccaact atcgcgacag tgtggtgatg aaccacatct
     1081 acttcaccac gattgccaag ggcgccgggt tggctgcgga gatggcccgc ggcgaagggc
     1141 ggccgcgcgt gtatgtggtg gagccgaccg ggccgtttga ggacgacccg aacgtgacca
     1201 acaagaagtt tcccgggaac ccgacgcgtt cgtatcgcag tgcgcagccg ttgcggattg
     1261 tgggggagat tacggaatgg gagctctacg acgcggagtt cgttcggcag ttgagggcgt
     1321 ttgttgcttc ggggagtggg gagatcatca attgatgaaa ggagagacct gtgctttggc
     1381 tgacggaagg tcaatgcaga aggtcgtcga acgatgtccg ctttcggcca gtagcggaca
     1441 tgcgtaaacg tcatgagatg aaccgcaaag tggccttaga tcgagagaac gcccaagctc
     1501 aaccagtaag cgtccccctc gtgcgagaca gccttgctgt gccagtgttt gccccccctc
     1561 aaggcttcgt agcgcccaat ttccgcgctg gacaaggggc gccagctgtt tccgcggcga
     1621 aagccgcttg caacctggac gccaagaggg agcctggaaa cagcattctg ctgggcttgc
     1681 gccagagact cgccgttggc tccgccggcg gatgttgggt tggcaagctg cactccgtca
     1741 tcctcccagt cgcagatcgg acatatggca aatgatccgt agcagtcctc cagggtcagg
     1801 aagccacatg atggacaagg cagatcgatc attgagaccc aagaacacca ggtagttgaa
     1861 ccactggacc ttcgggtgtc gcccatgtct gaaggaggcg aacgtccgct tcggttcgag
     1921 agcggactct agcattcttg attgcgttgt ctggcgccgg caggtccgct tccggccaga
     1981 agcagacgcc gccttcagac cgatcagtcc ttcttcatcc ggcgtaggtg agggcataac
     2041 cgctaccgat gcgctggatg cgagcaaacc ccagctcccc caaagcgcat gccggccacg
     2101 atcaaccgat ctgcactgac catatggcgt tggtgggcgc gacgacttgc gacagatgtt
     2161 gaatctgcgt gatcaaaccc gcggccagcc gagcatcgat gccgccacga gagcttccct
     2221 cgccgactcc ggccgacacg cgtcgtcact gcaaccttgc catcacgcgg cctagcttga
     2281 cgcatctgca aagcaacaca ggactttgcc gaccttggca catcgattat tcgacgaact
     2341 tttacactcg ccgagctgtc cgagtcgcac cttcagaagg accgaaggcc cgagctcgca
     2401 gggagccgcc aatctcaaca ccggctagcc atcgctcccc cgggcattca accaaccttt
     2461 gagatacaaa catgcgtccg cttagcaagg aagaagaagc aagcgtttcc ggaggtcgta
     2521 cctacaaaac tccggcaggc aacacagtca agttcaatgc cagcctttcc gacgctcagg
     2581 cagcgacact gggacagatc gtggactatg ggaaagcgca caacatgctg gctccagaga
     2641 ttcgaatggc agtcaaccag gcgttttatg aaagctccct gggttcgatg accagcaatc
     2701 ccaccaactc caacgttcaa ggcctgtacc agtacgacgc tagtacttgg gactatctgg
     2761 gtcatggagc gctcgatcga tcgagcacga acgatcagat cgcagcgatg tacgacgaca
     2821 ttcgcaactt cgaatctcga tgggctgcgg gccgccaagc cggaacgatt ccgactaccc
     2881 ttctgatcga cgactacgtg gagatcaagc accatctcgg gcccaacagc acgcaatggt
     2941 cgtctccggt tgtttccgac tacaacggca aggttacggt gctcggcttc accagcgttt
     3001 ccgccggaac aacggcaccg cctgatggaa gtacgggggg cgccggcagt ggtggccact
     3061 ctggaggagg tggcgggggt tcaagcggcg gcaccggcgg tacggtcatc gttggccctc
     3121 cgcagcgtca gccttgagcc cactcagaag tcacaggaga aattccatga aagccaagct
     3181 agccacttgc gtactcgcag gggtgctgat gtcgaccggc gcctcagctg cggagtgtgg
     3241 aagcgcggta gcggagtacg tttactccgg caaccctgca ctgcacgctc gaatccagcc
     3301 gctaacaatg cctggaacag ggaacacact tggagtcact ctggaagacc gatcccgggg
     3361 cttcaaggct tggttcatcg ccgacaaggg cagcggttcg tactcgtccc tagtctacgt
     3421 agatgacttt acgcagccgt catggcacca gcccgatccg gatgctcccc gggccattcg
     3481 ggacatgccc atcttcggtt gggatcagtc cctgcatgtg aatgaagatc taaggaacct
     3541 caagagtgcc ccgcagtttc tatttgttcc ggacctcgcg gaagtcgtgt cacatggcat
     3601 tgagcagccg ttccccctga ctcaaggcat cttcaatcga atcagctgtc gctaggcttt
     3661 aagggagggg ggcgacctcc ctccctctaa ccggcactgc catcacgccc agcagaactg
     3721 atcaatggaa ctgtttcgca aggaagccga gactgctcat gcagaccagt ttggcgccgt
     3781 catcgtttca acgccaaagg ctcacttcgc agctggtgtt agcgccactg cactgtgctt
     3841 ggccgcactc gttctctcat tccatgccca ctatgctcgc cgggaacagg tatctggtca
     3901 tctagttact gatacgggcg agagccggat tctagcgcgt cgatctgcaa ccgtctcaga
     3961 ggtgtacgtc agagagcacc aacacgttcg aaagggagat ccgatcctgc ggctatccag
     4021 cgaaatgcac acccgcgggg gtgccgtgca tgccagagtc gaggaggaca ttgtgaatca
     4081 aatcacctcg gtccacgcga gcgtcgcagc taccgaggca gcgctgatca gtgagcagca
     4141 tcagttgagg gagcgtgtca aatctcttct cgcccaggca tcggatcttc gtcagcagat
     4201 tggctatcag cagcaggccg ctgagcagaa gcagcggaca ctgacgaagc tgcgtccgct
     4261 tttgaaggat ggatttgtgg ctgagtatca agtccaggac ctcgaaagtg cgctcctgga
     4321 tacccgggcg cagacatcag gcctgcatcg gcagctggaa gagatctctc aacagcaacg
     4381 cgaaacaagc cgcaagttga cgagtctgga aatcgattcg gaactcaagt tgaacgatct
     4441 tcggcgagag caagcgagat tacgtaccag cctcgcccag gatcagagcg agcttgagct
     4501 ggtggtgagg gctcaatcag acgcgctagt cagctccgtt cttgttcagc cagagaacta
     4561 tgttgagcct gggcaaccta ttgcctctct cattccgaca cctacgacgc tgaaagcgga
     4621 aattttcatt cccagcacgg caatcggctt tgttcatcga ggcaccaagg ttgccatgca
     4681 ctatgcggca ttcccctatc agaaatatgg ggttcaatac ggggttgtcg aacaggtttc
     4741 cgaaaccccg actcaacctg cacagctgtc agccctgctt ggccagcagc cgccagccca
     4801 gccaatgtac agagccatcg cgtcgttgga aaggcagcag atcgtgactg atggccagca
     4861 gcgagcgctg gttcccggga tgcagctgga agctgcgctt ctgttggagg atcgctcaat
     4921 catcgcttgg ctacttgagc cgatcaccgc atttcgagcg tctatacagg actgatcatg
     4981 caagtcgcca actccacagc agtcagccca aaacccggcg atctattgcg tcaatggatg
     5041 aagcgtccgg tcaagatctt ctaccagagt gaagccaacg agtgcggtct ggcctgcttg
     5101 gccatgatac ttgatcacca tggccatcgg ctttctctgg aacagctcag ggcattcgcc
     5161 ggatcctatc cgcaaggcat gtcggtatct gatatcagcg atgttgcgga gcggaaaggc
     5221 cttgtggcgc gccctcttcg ggctgagcca gatgaactgg atcagctcgt actgcccgca
     5281 gttctgcatt ggaacatgga ccacttcgtt gtcctggaaa aggtgaaggc gaggaaagtc
     5341 gtgattctgg atccatccca aggccgcgtg gagatctctt gggcggcgct tggccggcac
     5401 ttcacagggg tggcaatcga gctcttgaag ggacccgatc tcaggaaggc ccaagcgcgc
     5461 agtagtcttc gtctgaggtc actcattggg ccgatctctg gtctccgacc agcgctggtc
     5521 aacctggggc ttctttcagt tgcgttggaa ctcatggcgc tcgcttcacc ccaaggcttc
     5581 cagatagtca tcgaccgtgt actcgccgat ggggaccgtg cccttcttcc ggttgtcata
     5641 gtgggactga gccttctcgc ccttcttcag ctgctgctgg gttggctgcg gtcctgggca
     5701 attgtttggc tgagcagcca gatcaatatt ggatggagct cgggcgtgtt cgctaggctg
     5761 ctgcgcctac ctacccagta cttccaaagt cgcagcctgg gtgacataac atcgcgattc
     5821 acgtcactaa acacaataca gcaggccata agcacgcagt tggtcgctgg gatactagat
     5881 ggtgtcatgg cccttgcaac aggagccatg ctgtttgtct acagcccact tctaggcgca
     5941 tttacaagcc tcacagcgct ggcttatgta ggcgtcaggg ccatctacgt gaagcgactg
     6001 caacacgcaa cggtttcctc cttgaccgag gacgcgcgcc ggcagtccat gctgcttgaa
     6061 tccatccgcg gtgcgcagac tttgaagctt ttcgggaaga ctggctggca atcgtcccgc
     6121 tttgcgaacc gaagcgcagc agcaatcgca gcatccattg ccgttcagcg tacgagcttg
     6181 tcctacgcat cctggggtgg cgtcctgctg tccgtaggta ggcttggtgc tctcgcaatc
     6241 ggcgcatcac tggtgatgga gggacggttc actgccggga tgctgattgc gtacgcctcg
     6301 tactcagagc agttcatctc gcgtctgagt gcgctttccg agtacgcaat ccaactcgcg
     6361 ttgctcggtt cacatgcgga aagagttgct gacattgctc ttgcacccgt tgagaaggag
     6421 cccgctgcac ctttgagcgc gcgcgttcaa cccgttgagg ttgagctccg caacgtctgc
     6481 ttcagatatg cagacaatca gccatgggtg ttgaacaacg ccagcgccat tatcccagcg
     6541 ggccagatga ctgctatcac cggtgcgtcg ggtacaggca agagcacgat cgccaagctc
     6601 cttgtcggac tgctgaccgt caacagtggg gaaatcctat tgaatggcat tcctttgagc
     6661 catcttggtc cgacccaggc ccggcgcatg tttggatgcg tcatgcagga tgacgcgctt
     6721 ttccacggga gtctggctga gaacatcgcc ctgttccagg aaggggctcc gcagcagcag
     6781 atcgagcact cagcccaagc cgcttgcatt cacgatgaca tttcaagaat gccgatgggc
     6841 tatcgaacat cggttggtga catgggatcg accttgtcag gaggacagcg ccagcgaatc
     6901 atgctggccc gggccctcta ccaacagccc caagccctcc ttctagacga agcgaccagc
     6961 catctggatg cagaaactga gcagagtatc aatgctcatc tcaagcagat gtcactcact
     7021 gtcattcaga ttgcacatcg attcgagaca atagatgctg cggattgtct gctgcgtgtg
     7081 catccagatg ggtccgtcag ccgaagggga agggctgccg cctactgaga ttcggggctg
     7141 gtactcgtgc gtacacagtc gcggtacagt gtggcaatcc ctctagccct acgttcgctt
     7201 cggccaagag ctgacatccg cccttctctg tcaacgagaa ggatcagcgg accatcgctg
     7261 gattcggcgc cgccgagagc gaatggctgg gtgctccact cacgcctaga agtgaagcgg
     7321 acaacagcct cggccggctc gcgccccggc ctgcgcttct ctccgccgaa gcggtacagt
     7381 tggcgagacc catgctcaga tttgccatgt ccgtaatcga cccgaatgac attgccggtg
     7441 cgcagcacga agtgcaacgg cttgtcggtc gttgcattct gcgccttcag cagtgcgagc
     7501 agctgatgaa gtccatgctg gcctttcaga agttgtcggg tacaccggaa acactcccaa
     7561 agagcttgaa caaccgcagg actgagatcg gcggcaagac catgggcgct ttggtgggtt
     7621 gcctgactac cgaatgcatg ctgaaggaag gcggcgaagt tcccgacgtc ccatcaggtc
     7681 tcgaccatga ttcaagccct tttggcctgc acatagggat caatctgcca ggggaatccc
     7741 atgcggccct gcgaacggat ctacgcgcgc tggtgaacct caggaatacg ctcgtccacc
     7801 acttcttcga gcagtacgac atccggacta tcgatgaatg cgtcaaggcc caggatgcgc
     7861 tcaggcacgc ttgcaccgag atcgatcggc agtttgaaca actgcgcacg cttgccgcag
     7921 ttatggcgca gggcatgaca gcctttgctg aactggtgca gagcccagag ttccatgact
     7981 ttctggtcaa cggcatcgcg cctgatgggc agatccattg gccgatcgcc ggcattgtca
     8041 gtgcgctgag acaggccttc cgagaacggg cgatcgacgg ttgggtgaat ctggacacag
     8101 ccgctctgtg gatggcagag catcatccgg aacaaacccc cgggaagtat ggctgcgccc
     8161 aatggctgga cgtcatccgt gattcccgtc aattcgagct gcgcgacttc gcgcacaacg
     8221 gccaacgggg agcgtggttt cgcgagcggc ctgagtcgac gggctgacca ggctctgctg
     8281 gcggtagccg ccatacgccg tcgcctacca agttctgtcg catttgccgc gccttgcgtc
     8341 tctggccgaa cgatctgacg actccgtccc agaagtgccg ttccgcctga cacgccaagg
     8401 ctcttgcccc tttccacgct atgcgacaat gccgatagcg tctagggttt tggcggcatt
     8461 ggcccccacc ccttggcaat cctcccaaca gcaggtaatc gttaccccgc caccgtgcat
     8521 cggtggtcgg gcctcgaaaa cccgtcgttg ggaagtagtt tgcgcttgcc agccggcatc
     8581 accctgcgtg gtgccggctg gcaatccgtc tgccagctat ggcgggcggg gcgtgggggt
     8641 cttgtacccg ccggttccca acatccggtt ttcgagccat gccccgtccg ccacccttat
     8701 cggtggcggc ttctgcctac atgcacggag cctgccatga ccaagccgca ctcccctccc
     8761 ccgcgcccca tccagcagcc gccatcaccc gggcctgccc tggaccccac cagcctcatc
     8821 gccgtcctgc acgccattgg cgcgggcgct gcggccgacg gccagccctg gcccgagcgc
     8881 catcagctgc gcagccggca gattgcactg tccgacgccg actgtgcggc gaccggccag
     8941 cgcatcgtgc aggagatcct gctggcggcc gaacgcacgc gccagaacgg cgagcccgag
     9001 cagtacgtgg gcgaccgggt gatggagggg ctggtgatgg ccgatattgc acttactgct
     9061 ttcatccacg agcggatgcg gcccagggat tgaaggcgcg gcggatcgag cgcccaactg
     9121 tcaggcctcg tccatctgtt tgggcgaggc atgccgcgga acagcaagtg ccgacctggc
     9181 cgccggcact tgcgccttcc acgtcccgca cgctcactag agcggacgcc cgatgccgtt
     9241 gcagaccgcc gggttgttca ggccagccgc attgccagcc agtgcgaagc gcgtgcgaat
     9301 cgcatttcgc caactgttgg gcaacgggta gaagccgtgg cttcgaacgg cagcatcgtt
     9361 tcgaccctgc tcaacccctc cgacctgggc acttccatag tgcgtgagca ggaaactgcg
     9421 caggctgttg ccgaccatcc ggttctggta gcactggccg atgatcaggt tcgtgagccc
     9481 aacgatggga taacccgccg aggggttgcc gaacacaggc acccagttgg ctggatcatt
     9541 ggcggccgct ccggtcggcg gcgaggcggt ttcgatggtc gcctgcaggc tgacttcggc
     9601 aggcgagtat cccttcacgg ttgcaacctt ggtcgcatcg ctgagatttg caacgacatc
     9661 cggcccggtg tagccaatcc gaccatctcc aaccaggacg gcattgtaga gcgcaacgtc
     9721 ccccggccct ggcgcagcca tgaagttgga cggtaccgtg ttgccaacga acaggttggc
     9781 gaacgtgggc tgcaccgaga acgagggcac cagaccccag ccactggatt tcagcgttgt
     9841 gcccgagacg tcgctcgttt ggcaggcggc ggtgaggaaa cgggtgagga tctcgctgct
     9901 gccgctgctc tccgcccggt agacgaccgt gatctgcccc gtccgacctc cagccggcag
     9961 ttgatcccag cgggtgatcc tgccggagaa cactccgcag agctgggaaa ccgtcaggtc
    10021 cagcacgcca ccaggcttgt tgaacggaac aatgatcggg gccagcgcaa cggggatctg
    10081 tatcagcggc ccataggcgt tgccggaccc gtaggaattg taggtgctgt tgtacgccgc
    10141 cagttcggta ctggtcagca ccgcgtcact gcctgcgtaa tggaccgttc cggtcgtctg
    10201 cagcagcgcg ggctcattgt tgaggaacgc acgcttccca ttgccggaac ccagcacgac
    10261 atagctgaat tctgccggca ggatgttgtc cgtcgctccc ttgtacaggg acgcgggcat
    10321 tgaggcgcct cctcccttca ccagggcctg cgcagatgcc gaatcaacag gggcgagtgc
    10381 ggcggccgcg atcaaggcca ccagagtctt tggcacgtac atgtgcatct cctgagaggt
    10441 ttgcttcgtc attgaagggc aaacgaggca tctgctgatt gcgcgcgatc gccaggagcc
    10501 tccttccatg gcgtcaggta gatcctggtc tgaaagaatg acagaggctt taataaacct
    10561 gtggaggaac cggatggcga gcgaccactc tcgaaagccg gctgccggaa tcctcctagc
    10621 cgctttgcca gcattccccg atagctccct gcgaagtgcc tgccgcacca tcgagcgtcc
    10681 cctccgcagg aaaccacaca tgagcctggc gctggtccat agccgcgccc gcgccggggt
    10741 cgatgccccg ctggtgcggg tggaagtgca tctctccggt ggcctgcccg ccacccagat
    10801 tgtcggcctg gccgagacca gcgtgcgcga atcacgcgaa cgcgtgcgtg cggcgctgct
    10861 ctgtgcgcgc ttcgattttc cacaacggcg catcaccttg aacctggcgc ctgccgatct
    10921 gcccaaggag ggtggccgct acgatctggc gattgcgctg ggcatccttg cggccagtgg
    10981 ccaggtcgat ccgcaggcgc tgcttcagta cgagttcctg ggcgagcttg gcctgaccgg
    11041 cgagctgcgg ccggtggccg gtgcgctgcc cgcggcgatt gcagcggccg aagccgggcg
    11101 catcctggtg gtaccaccgg gcaatgccgc cgaggctgcg ctggccgagc acgctgatgt
    11161 gcgggtagcg cgtacgttgc tggaatgctg cgccgggttg gggaacccgc gcctgctgcc
    11221 gccagtagag cgtgtggaca caacgccgtt gccactgccg gatctggccg acgtgcgcgg
    11281 gcaggcgcat gcacggcgcg cactggaagt ggccgcagcc ggtgggcatc atctgctgct
    11341 gatcggcagc ccgggctgcg gcaagacgct gctggcctcg cgcttgccca gcctgctgcc
    11401 ggataccgag gaagccgagg ctttgcagct ggcggcgatt gcctctgtga gtggcgaagg
    11461 actggaccca cgccgctggc ggcagcggcc gtttcgggca ccgcaccaca gtgcgagtgc
    11521 agcggcgctg gtaggtggcg gcaacccacc ctgccccggc gagatttcgc tggcgcatca
    11581 tggggtgctg ttcctggatg agcttccgga atggaaccgc agcgcactgg agacgctgcg
    11641 tgagccgttg gaatccgggc atatccgtat cgcgcgcgcg gcgcgtagcg tgcagtaccc
    11701 cgcacgcttc caactggtgg ccgcgatgaa cccctgcccg tgtggctggg ccggtgaccg
    11761 cagcaaccgc tgcctgtgca cggatgagcg catcacccgc tatcgcgcgc gggtgtcagg
    11821 gccgctgctg gaccgcatcg acctgcatat cagtgtggcc aggatggacg ctgtagagct
    11881 gcgggagagc acgccgctgg gggaacccag cgcatcggtg cgtgagcggg tggaagccgc
    11941 gcatgcccgg caacaggcgc gtggcgggct gaatgcccat ctgccaccgg cggcactgcg
    12001 ggcgtgcacg agactgagcg aagccgatca ggatgtgctg gagcaggcca tcgagcgcct
    12061 gcagctttcg gcacgggcga tgcatcgaat cctgcgggtg gcgcgcacga ttgcagatct
    12121 ggcgggttgt gaagcgatcc agaccgcgca tctttctgaa gcgatcgggt accggcagtt
    12181 ggaccgggga aagccctaga agcaccgttc ggagtggtcg ttggtagagt cgactgttag
    12241 tcgactcgcg cgcgaagcgc ggtctcctgc gaggcagatg cgaagagcag tcgactaaca
    12301 gtcgactaac agtcgactct accaagagcg ggtcatggca gcggatagat caatgccaga
    12361 gcaggtcatg gcagcgaagg gtgcgagggc gccaagaggt tcatggtagt ccggcggatt
    12421 ttgggggtca gagccctttg cggtgcaaag ggatctgacc ccgaaactcc ttgttgcctc
    12481 agaacgtcat cgaggtactg aacatcagct gccggggcgc gctgcgctgc agggtctggt
    12541 aatcccccga gaacgacgag ccggcgatgg tggcggtgcc gatgttgtgg cggttgaaca
    12601 ggttgctcac gtccagccgc agctccagcc ccggcacggc gctgtccgca ccgaagcggt
    12661 aggcggcata ggtgttgacc tgccagaagg tcggcacgcg aatgtcgttc tcgtaggtga
    12721 agggctggcg caggtacgag gtactggtgg caccgaaacg ccagtcgccg aagtgcgcgg
    12781 acaggtcgct gaccagcgaa atctgcgggt agcccggctg cgcattgccc ttgatcgggt
    12841 acacggtatc gcccaccacg aaatcactgt cgtagtacga acgggccacg gccacgccct
    12901 ggtagaactg caggtggtcg gtcaggtcgg cggtgatgcc gaggtcggcg ccgatcacgt
    12961 gcatcttcgg catcagccgc acggtgttga tctgggcgaa ctgggtgccg atggcggccg
    13021 acagcaggcg gttgcggatg tcgctgtaga acacatcgcc ggtaatcgtc agccggtcga
    13081 aacgatgcga ggcaccgagg gtcaggttcc agttcttctc cggccgcagc gtgcccgcta
    13141 cgcgatcgaa ctcttcctgg tcggtaatgg tccacgccga ggcggtgtag ccgatgttgc
    13201 cgcgctgggc cacgcgatag ccgttcatgg tgttggccag gtcgatgaag gcatcggtgg
    13261 attcggtcgg gctccagaac agcgagacgt gcggcaggaa gttgctcttc gcgcgcagcg
    13321 tgccgttcac cggccggtcc ttggcatcac ccaggccgcc accgctggtg cggaagtcca
    13381 cggccttgaa gccgacaccc agcttcagcg tgtcgttcaa cacgatgtcg tcctgcaggt
    13441 agaactggcg cgagcgagtc acccagctcg atgcgttgtc ggtcttgaac gcggggccat
    13501 acacatcgaa cggaccggtg gccttcagcg gcgggccctc gcccagcagc ggctgctggt
    13561 accactcggt cttggccgcg gccttgctct tctcctgcca gacgccggcg gtgaaggtat
    13621 gcgcgccggt ctcgaactgc aggttgagca tgccgcccag ccgattcacg cgcggcgtct
    13681 gcacctgctc ggagaacggt gcaccgttgg gcgatggcac ggtcgggtcg gtgagcgtgg
    13741 cctgggtatg gctgttggcg ttgtacagct gcacgttgcc actcagcgcc ggggtgatct
    13801 ggaaccggtg gttgatcgag gacacgcgat cgcgggtggt ctgaccggtg tcgtatggga
    13861 tcagttcgga cagctcaccg caggtgtagg cgccacagga tttgtctgcg ttttccggcg
    13921 aagccacgta ccacgcccac gcgtaatccg gatagaaaat gtcggccttc cagcccagct
    13981 tgcggatcat gtcgaaggag atgttgttgt agccccagac cttggccttg ctgtcggaca
    14041 ggaacacggt gaagtcaccc caggccacgt cctgctgcag cttcagatcg ccgcgcagga
    14101 agttctgggt gccctcgccc tggtatttgt cggcggacac ccgctgcagg tcgaccagta
    14161 ctttcgggcc gtgctcgccg agctggccgc tctgcccgga cacggtggtg accagcgtgc
    14221 tgttgctgcc cacgccctgc ttcacacgca ggctgggcgt gtcctgcagc tcgcgcaggc
    14281 ggtattccag gctgccgccg ttgacgctgc tggagaacac gctgaccggc gcaccaccgg
    14341 ggctgaccgt gatcgcgccg atgccatcgg gcacgcccac attcaccacg ctggtgccgg
    14401 tgagcgagag gaagccgttg tcgttcagcg gcacgccctc gaacgtgatg cccatttcat
    14461 tcatgcggaa gccgcgcacg aacaggctgg tggccgagat atccaggccc aggccgtcgg
    14521 tggcggtgta gctggcgccg ggtacctgct tcagcatggc caggccgttg ttgccggtga
    14581 ccatggcgtc gaggtcttcg gccttgatga tgtagcggtt ggggccgacc acctgggttg
    14641 gcgcgacggc ggcgccacgc ggcgtggcga tcacctgcag cgcgttcaag gtggtgggcg
    14701 tgtcgtgcgc ggtgtcggac gattcggcgg cgtaggcggg tgtggcgatg acggtgatga
    14761 tggccagtgc gaggcgcgtc gtgggtggag tgttcatggg cagatccagg tgcagggaga
    14821 gagcggcgca ggcgcacgcc cagcgcgttg cagcaccggt gtgtcggcgc cctggctggc
    14881 gatgcgattg cgttgaggaa agacggcgca gcgcgcgccg gtcagcagat gaaagcgatc
    14941 atctgccgcg ggattcggtg gggtgatttc gacgtgcgaa attcttgcat cgcactgccg
    15001 catccgccat tgcgccgtgg tacagcggca atggcggtgg ggatgggtgg gttatacgtg
    15061 ggtataggtc ggtgcgtgcc cttcatgtgt gccaaccaag gttggcacct accagggcgg
    15121 atggccgcgc ggttactgca ggacgaaacg ctcgatcgcg cgcgcgacgc cttcgtcggc
    15181 gttgctggtg gtttcaaacc gcgccacggc cttcaccgca tcgatggcgt tgcccatcgc
    15241 cacgctggtg ccggcgtact gcagcatggt caggtcgttc tcctggtcac ctatggccat
    15301 cacgttggcg cggtcgatgc ccaggtgctc ggccagcttc tgcaggcttg gccccttgcc
    15361 ggcgcgatgg tcgaacactt ccaggaagaa cggcgcgctc ttcagcaccg cgaagcgctc
    15421 ggtcagttcg gtgggcaggc gcgcgatggc ggcatccagc acgtcgggcg catcgatcat
    15481 catcagcttg atgaaggaca tggacgggtc catgtcggcc acgcggcggt acgacagcgg
    15541 catccgcgaa agatgcgagt cggccacggt gtagtagctg atgtcctggt tgggcgtgta
    15601 catgcgctgg ctgtccagcg cctggaagtg cacgccgagg tcgcgggcca cctgctcgca
    15661 gaacaggaag tcgtcgaagc tgagcggata ctcgaccacg gtttcgcgcg tgccgatgcg
    15721 ctgcaccagg ccgccgttgc aggcgatgca gtagtcgtcg tcaccggtga tgcccagctc
    15781 gtgcaggaac ggtgccaggc cgggaaccgg gcggccgctg gtcagcacga tgtgcacgcc
    15841 cagcgcgcgc gcctgcgcga tggcctgcct ggcccgggcg gtgagctggt gggctggatc
    15901 cagcagggtg ccatccatgt cgatggcgac cagttcgatg gtcgattgcc tgcggcccat
    15961 gtccattgcg ttcaactcgt gcggggcacg ccagtttacc ccctcatgcc cggttcacct
    16021 ctttgcccac gttggccggg atactgcagg accctgtgcg tcccccaccg caggacggcc
    16081 cattgaccgc ccttccctgg agaaccttgc gacgcatgac ctaccgtgcc cccgaaacca
    16141 acgacagcgc gccgctggcc cagcagatcg agcagatgat cgacgagctg cccggcgaac
    16201 aggtcagcgt cggcaccctg ctcagcgcgc tgggcgatga gggcctgctg ctgatcgtga
    16261 tcctgctctc ggccatcttc atcattccgg tgtcgattcc cgggctgagc acggtgttcg
    16321 gtgcctcgat cctgctgatc ggcctgagcc gggtgcgcaa ccgcccattg tgggtgccgc
    16381 agaagctggc gcgccgcgag atcgccaccg acaagctgaa ggccaacctg ggccgagcgc
    16441 tgaagtgggt gcaccgcatg gagcggttgt cgcggccgat gcggctggcg gtgatggtgc
    16501 gctcgaagaa gatgatgcgc ctgaacaacc tgatgctggt gttcgcgacc ctgctgctga
    16561 tggcgccggc cgggccgatc cccttcagca acacgctgcc tgcgctggcg ctgatgtcgt
    16621 ttgcgatcgg cttcatccag cgcgatggcg cggcggtggc ggccggctac ggattcgtgg
    16681 tggccacggt ggtgtatttc ggcgtgctgc tgggtggcgt ggggtttgcc gccgaatcgg
    16741 tgttcagcgg gctgcgcagc gggccgtcgg aaccgtagag ccgagcccat gctcggctga
    16801 ttccggcttt ttgtagagtc gagccatgct cgactgcacc ttccaacagc agtcgagcaa
    16861 gctcgactct acaagggcca gatccaaagc agtcgagcaa gctcgactct gcaaggctac
    16921 ttggccgaca cccgccacac gacgtcgccc acatcgtcgg ccaccagcag tgcaccctcg
    16981 gcatccatcg ccatgcccac cggtgcgccc atcagcgtct tctcgtcctt ggaggtgaag
    17041 ccaccgacca cggtctgcgg ccgcccggtc ggcttgccgt ccttgaacgg gacgtacacc
    17101 acttcatagc cgctcagcgg tgaacgatcc cagctgccgt gctcgccgat gaaggcacca
    17161 ccgtggtact gcgccggcag tgcctgcccg gtgtagaaca gcagccccag cggtgccacg
    17221 tgcgagccga tggcgtagtc gggcacgatc gccttggcca ccagatccgg gcgctgcggc
    17281 tgcacgcgct catccacatg ctggccgtag tagctgtagg gccagccgta gaagccatct
    17341 tccttcaccg acgtgaggta gtccggcacc aggtcggcac cgatctcgtc gcgctcgttg
    17401 gccaccgccc acagcttgcc ggtactcggc tcccagtcca ggccggtcgg gttgcggatg
    17461 cccgaggcaa agatgcggct gccacgggtg gccacgtcca cttccagcac caccgcgcgg
    17521 cggtactcca ccgccaggcc gttctcggtg atgttgctgt tggagcccac gcccacgtac
    17581 agcttgctgc catcgcggct ggccagcagt tccttggtcc agtggtggtt gatggtgctg
    17641 ggcaggtcgg tgaactcgcg gcccttgtcg gacatgcggg tttcgcccgg cacatagtgg
    17701 tactgcatga tgttgccggt gttggccacg tacagcgtgt caccgatcag ctggatgccg
    17761 aacggcgaat gcaggccctc gatgtagacg tgctgggtcc aggtggtggt gccgggcgtg
    17821 cgccgcagca gggtgacccg gttgccgccc ttgccggcct tgcccgaacg ggccttcacc
    17881 ttgccggcaa tccactgctt gggcgtggtg accggctctt cgccggggcc gttgccttcc
    17941 accaccagca cgtcgccatt gggcagggtc agcaggcgcc gcgggtgcat caggttggcg
    18001 gcgatgcgct cgatcttcag gccgtcggcc accgtcggtg actggccttc ggcccagccg
    18061 acgcccttgg gcacctgcat tggcggcatc aggaagttct tcggcgccgg cagcggcggc
    18121 ttcgtgccgg actggtcggc ggggtggtac tcggccttgc ctgcacaggc cgacagggtg
    18181 acggccattg ccagggcggc cacggtgggc aggatgtgct tagccatgac ggcctccctg
    18241 cagcaccggc ggctgcaatg acagcaggat caggcccagt gcgatcaggg ccacggtcag
    18301 cgctgacagg atcgtgcccg gcaccgcgac ggcataggca tcacggctgt gcacgaaggc
    18361 gttccagatc gccagcagca cggccaccag gttgaggaag aagtcgatgc gatcgatgcg
    18421 ggtggccgtg ccgttgcggc gccagaccgc gaacaggttg atcagccgcg gcacgatggc
    18481 gatcagcagg ccgaaggtga tcagccaggc cgcggccttg ccccacatca cctcggcgct
    18541 gttgagatag atcgcgtcga agatcagcgc gccgacgaag aagccgaacg gtatcgggtt
    18601 caacaggctg aacagcgtag tgcctgggcc gcgatgggcc tgggcgagcg gattgaccat
    18661 catcgtgctc cgtgcggaag ggtgcatggg tgtggtagca caatggttgg tgaggcgaca
    18721 tgaagctccc ttgtagctag cacgggcgtg gtcacattcg aagctactgt cgaaatcacg
    18781 cgacgatgaa tcgagcaccc tcgggtgtct ttcgcacgct ctcaagcaaa atcccgaacc
    18841 tcagtcgcaa gaccgagtct ctaatacacg cccggtgcgc gagcccaacc agaataaacc
    18901 aaggatcaaa ttgaatttga aatcactgaa tatcacccca cctttcgcat tcaatattca
    18961 acttaccatt ccgcacgcac cccttgatga catatgatcc actcgctgct agcctttagc
    19021 ggcactctaa cttcagcgac aacttgacaa aggaagtcac cgcatgtcaa ccaccacagt
    19081 acctgcaaag ctcgcacctt cgctgcatac gctcttagtt gcggcgccgt tcaatgcaac
    19141 gtcgcgctcg attcagtatg gaattcagta tcagatagaa ggtggaatcg tatgcaacat
    19201 ccatcactcc gacaaacgaa gggatatcgt caaaattaca ctgcaaaatg tggacgccaa
    19261 ccaagagatt gccgcacagc ttcgcttttt cattgagaac ctagcgaatg gaacgcagca
    19321 ggagggccca tgatcttcag gggaacctta gaaaatctga tcgtccaggt tgaactttcc
    19381 ggagagataa gtgaagtcag agaatctggt gcagggcatc agttaaagat ggttgatgga
    19441 gcaatcttga attggtaccc gactacggga acgatatcct ttcaaggtag caaatcagct
    19501 tccgacgccc tgagaactcg cttggagcag acgctatcct tgccagcatc caatgcgcca
    19561 aaatcgagct cctcgtcagt ttccgaagtc gctcccgcca aggtcgaggc caagggaaag
    19621 gttttcgttg tacatgggca cgatcaagca acacgcgagc agctggaatt gattctgcac
    19681 aagctaggcc ttgacccatt cgtattgcag aacacgggag ggggaggact cacaataatt
    19741 gaggctctgg agaaggagat tggccccaat cctaatgccg aagtgaaatt tggcatcgtc
    19801 ttacttacac cggatgattt cgggtattca aagcaagatg gtgcagaaaa gaatcagccc
    19861 agggcacgcc aaaatgttgt acttgaaatg ggaatgcttc tttcagcaat tggaagaaca
    19921 aacgttgcga tattgaagaa aggccacatg gaagttccgt cagacgcgca aggaattctg
    19981 tatctgccct tcaatgatca cgtcaaggaa gtagttcctc gactagtcga tcggctaacc
    20041 aacgccggct ttgtcttgga tccaagcagt atcaccaagg catcttcgta gcttgcacgc
    20101 gatcagcata gatatgcaaa cacctcggtg attatttacc cttgctatcc agaatccagg
    20161 cagggaacct ttggatcctg aattatcaat cttcactgcg gcttgcgccc attgattggg
    20221 cgcaagctag cgcagattgg cactggcacg ccagtggaat atttcgaagt agagatactt
    20281 tctaaaattt atttccatcc ccatcaatta tgtgcaggaa cccttatgtg cagggacccc
    20341 agaaacgacg gcggtgttac aagcttggct catattgatg ggctgagtgc gcgagggggc
    20401 ggtcgcactc agaagccgag cccaaactca gccacccaat gacgtctgag cgcaaagcag
    20461 ccgagcatgg gctcggctct aaaggaatgc gcagtcgtca ttaccccacg gcataagcgt
    20521 ttgtgacgca attggcacat ccgcagattg ctgctgtgaa gaggtagggg gttcttcgtt
    20581 gtctcgcgtt tggctcgttg cgatggggca gtcccgcccc gccgtcctgc catgccgatt
    20641 cacaacagaa ggattcgtgt atgaagcgac acacgcaacg ctccgcgcca ccgcgctccg
    20701 cgcggctggc ccttgccact gccctggtgc tgggcagcct ggtggccacc gcacaggccc
    20761 agcaggccga tccgctggcg ggcatccagt ggcacctgcg caataccggg cagacggtac
    20821 cggccgacac gctgccggtg gccggcaacg atctgaacgt ggatggcctg taccgcaacg
    20881 gcatccgcgg ccagggcgtc accattgcca tcgtcgatga cggcctgcag atcgcgcatc
    20941 cggacctggc cgccaacgtg gcggccgtgg ccggcaagaa cttcgccaat ggttcgaaca
    21001 atcccacccc gtccaatccg gacgccgaca accacggcac catggtcggc ggcatcgccg
    21061 gcgcggtggg cgccaacaac ctgggcgtgc gtggtgtggc tccggcggca acgctgaagg
    21121 gcttcaaccc catttcgcgc tccgcccagg gcaaccagca gagcaacatc gagtacgcct
    21181 ggtgggatgg cgcggaatcg gccgacgtgc aggtgttcaa caacagctgg ggcgccggcc
    21241 cgggcaatcc gaacctgccg ttggcgtaca gcgagaacac gatacgttcg tatgagcagg
    21301 cgctgtcggg tacgcgcggt ggccgcggcg gcatctacgt gaagtcggcc ggcaacaact
    21361 tcaacaacgg gtactggcag gacaacctcg gcaacacctt cgatgtctgc accaatgaca
    21421 ccaagaaccg caacaccggc tgcgtgccgg ctggccgcga tccgcgcaac aacctgttca
    21481 acgtgatcac cgttgccgcc gtgcgcgccg atggcgtgcg ctcgtcgtac tcctccaccg
    21541 gctcggccct gtgggtctcg gcctttggcg gtgagtacgg cctgcaggcc cagtacgcac
    21601 cgggcctggt ggcacgcgcg tacgacccgg ccatcgtcac caccgacgtg accgggtgcg
    21661 cgcagggcag caacaagaac accaaccgcg agaacacgct ggacagcaac cagtcggcca
    21721 tcgacagcac ctgcaactac accgccaaga tgaacggcac gtcagcgtcg gcaccaatgg
    21781 tatcgggcgt ggctgcgctg gtgctggaag ccaatccgaa cctgtcctat cgcgatgtga
    21841 agtacatcct ggccaccacc gccacccgca accacccgaa ccagccggcg gtgacactgg
    21901 ccgacgggcg cacgctggtg ccgggctgga cggtgaacgc tgccaaccgt gcctacagca
    21961 actggtatgg cttcggcgtg gtcaatgctg cgcgtgcagt agaggtcgcc gagaacttcc
    22021 agtcgctggg accgctggtc gacagcggct ggcgcaccac cacgcgcacc gtggccatcg
    22081 gcaacacctc ggctgccgcg gcacgcctga ccttccagct ggccaacggc gcgcgcaaca
    22141 tcgaaagcgt gcagctcggc ttccgggtaa accaccgcaa tacgcgccag ctgcagttcg
    22201 tgctggtttc gcccagcggc acccgcagcg tggtgcaacc ggcgttcacc gcgatcggtt
    22261 cgggcacggg gaacgcgcag agcaatttca ccagctggga cctgctgtcc agcaatgcct
    22321 tcctggatga gaatgccacc ggcacctgga cgctggaagt gaccgacatg gggcaggccg
    22381 cgactgctgc atcgcgtggc aacctcgaat ccttcaagat ccgcgttctg gggcactgat
    22441 gatgaaaaag accattctgt tgagcacgct cgccttcgcg gcgatgacct cccctgcctg
    22501 ggcacagagc tcggggcaga cacctccggc caggaccccg tcaaccgtgg atgcgcagga
    22561 actgaaggcg tccgctaccg gccgctcgtt cgatgtgggt ggcacgcgtt tccagctgtc
    22621 tcccacgacc acggtgaagc aggtcagcgg cggtcggttc acgatcacct cgcaggcggc
    22681 ggccaccagc acgcgtacca agcgttcgct ggacggcgca gcggccgcgc ctgctgatgc
    22741 cggcgccggc aagttcgccg cggcggtatc ccacgacgga gcgccggtgg tggcgacgtc
    22801 gcgggtcaag gtgttcttca ccgatgcagc cgctgcccag cgcgcagcaa gcgccaccgg
    22861 cggcagcgtg gtgaaggtgt cgaaggcgtc gggccaggcc atcgtggagt acccgtcggt
    22921 gaacgcggcg ctggatgcga ccaccaagct gctgtccacc gccggcatcc gcgccaccga
    22981 gccggacgtg gtgcagtggg aagaaaccaa gtaaggcgtt gagtggtgcc cccggccggt
    23041 tggctctcct ggccggccgg gggatcaggg gtgtgccgac caacggtcgg tacccaccag
    23101 cgtcagcgag cggcgagtgt gccgttgtgg gacaggctgc agctggccag cgggtcgctg
    23161 ccggccgcgg ggtgggccgg ctcgagcagc aggcgctgca cgtcggagaa cagcttctcc
    23221 accggcatgc cgtagggtgc gaacaggcgc aggcggccct ggcgatcaaa cacgtagccg
    23281 ccggcgatgt ggctcatggt gtaggtcccc ggcacctggc cgggttcctt ttcatagaac
    23341 gccttgaagt cgctggccat ggcggccaac tgtgcctcgt tgccgaccag cgccaccgcc
    23401 ttgcggtcga atgcttccac gtaggtgcgg gcgacctcgg gcgtgtcgcg ggctggatcg
    23461 acgctgacga acaccacctg cagctggtcg gcgtccttgc ccatcaggtg cttgacctgg
    23521 ctcaactcga ccatcgtggt tgggcacacg tccgggcagc tggtgaagcc gaagaacagg
    23581 taggtcacct gcccctgcag atccgccggg ccacgcacgg ttccgtggct gtcgggcatc
    23641 gaccagtgct ggccgagttc ttcgcaggcg atgtccttgg agtagaagtc catgcgcgac
    23701 tgcgcgctgc agccggccag cagtccgagc agcatgcctg cggccaggcg cagaccacga
    23761 tgggggaacg caatgccttt cacggtgcgc aggctcagtt gatcatcatg tggtagtgca
    23821 tgctccagat gatccagacc gacagtgcga cgacgatgaa caggatcacc agggtgaaca
    23881 cgaagctggc caggttccag ccgccttcgg acttgcggtc catgtgcagg aaaaagacca
    23941 gctgcaccag gatctgcgcc accgcgaagc cgaccagcag gaacagcgtg agcggccgcg
    24001 acagcaccgg gttcatcacc agtgcgaacg gcaccacggt cagcagcgcg cacagcacga
    24061 agccgatcag gtaggacgtg gtggagccgt gcgcattgcc ggcgcgcgag gtttcgacgt
    24121 gggccatgtc agaaggctcc gatcaggtag acgaaggtga agacgcagat ccacaccagg
    24181 tccaggaagt gccagaacag gctcaggcac gagacgcggg tgatgttggt cggggtcaag
    24241 ccacggcggt agacctggtg catgaccacc gccatccaga tcaggccgct ggccacgtgc
    24301 aggccatggg tagcgacaag cgcgaagaac gctgacaggt aggcactggt gctggggccc
    24361 gcgccttcgt ggatcaggtg cgagaactcg tagatctcca tgccgatgaa cgaggcgccg
    24421 agcacgaagg tcacgcccag ccagcgcagc actgccgaag cgtcatggcg gtgcattgcc
    24481 agcacggcct ggccgtaggt gatgctggag accagcagca ggaaggtttc ggccatcacg
    24541 aacggcagcg agaacaggtc cttgccggtg gggccgcctg cgtaggcggt gctgagcacc
    24601 gcgtacgagg cgaacagcga accgaacagc accaggtcgg acatgaggta gacccacatg
    24661 ccgaacacct tcatgccgcc ctgctcatgg ctgtggtcgt gtgcgtggtg gtcctcgtgc
    24721 gcctgcgtat cgctggccag ctccgggcgg gtcaacaggt tcatgcgcgt acctccttca
    24781 gcttggccag gttggccgcc tcggtgcgcg ccacctcttc ggaactgacg tagtagtcca
    24841 cgtcctcgtc gtaggagcgc acgatcaggg tcacgatcat ggcgatgaag ctggcggcgg
    24901 ccatccacca gatgtgccag accagcgcga agcacagcac caggatccag atgttgagga
    24961 tcagcggcac gccggtgttc ttcggcatgt ggatcggcgc gtacttcttc ggcggcggcg
    25021 gcaggccgcg cttcttcgct tcgtggaagg cgtccagctc atcggccttg ggcaccacgg
    25081 cgaagttgta gaacggcggc ggcgacggcg tggcccattc cagcgtgcgt gcattccacg
    25141 ggtcgccggt caggtccagg ttgcgcttgc ggtcgcgcac gctcacgtag atctgcacca
    25201 gcatcaggat gatgccggcg aacacgaaca gcgcaccgat gaaggcagca atcaggtacg
    25261 gcgtccaggc cgggttgtcg tactggttca tgcggcgggt catgcccatg aagccgagca
    25321 tgtacagcgg catgaaggcc aggtagaagc cgatcaccca gcaggcgaac gaccacttgc
    25381 ccaggcgctc gttgagggtg aagccgaaca ccttcgggaa ccagtaggca aatccggcca
    25441 ggtagccgaa cagcgcgccg ccgatgatgg tgttgtggaa gtgggcgacc aggaacaggc
    25501 tgttgtgcag caggaagtcc gcgcccggaa tggccagcag cacgccggtc atgccaccga
    25561 tggtgaaggt gaccaggaac gcgatggtcc acagcattgg cacgctgaac tcgacgcggc
    25621 cgccgtacat ggtgaacaac caggtgaaga tcttcacgcc ggtgggaatg gcgatgatca
    25681 tcgtcatgat gccgaagaag gcattgacgc tggcaccgga gcccatggtg aagaagtggt
    25741 gcagccagac gatgaacgac aggatgccga tcgccagcgt ggcgcccacc atcgacttgt
    25801 agccgaacag cttcttgcgc gcgaacgtgg cggtgacttc agagaagatg ccgaacgccg
    25861 gcagcaccag gatgtacacc tccggatggc cccaggccca caccaggttc acgtacatca
    25921 tcgggttgcc acccaacgtg ttggtgtaga agttgaagtc caggtagcgg tccagggtga
    25981 gcgcgcccag cgccacggtg aggatcggga aggcggcgat gatgatcacg ctggtgacca
    26041 gtaccgtcca ggtgaacacc ggcatcttca tcagggtcat gcccggcgca cgcatgcgca
    26101 ggatggtgat gaacaggttg acgccggtca gcaatgttcc gataccggag gcctgcaacg
    26161 cccagatgta gtagtcgaca cccacccctg gactgaactc gatacccgac agcggcggat
    26221 aggcgaccca gccggtcatg gcgaattcgc caacacccag cgagatcatc atcagcgcgg
    26281 cgccgaccac gaagatccag aagctgaagg cgttgaggaa cgggaacgcc atgtcgcgcg
    26341 cgccgatctg cagcggcacg atgatgttca tcaggccgac cacgaacggg gtggccacga
    26401 agaagatcat gatcacgccg tgcgcggtga agatctggtc gtagtgttcc ggtggcagga
    26461 agccgtcact gcccgggccg gccgcggcca gctgcgcgcg catcatcagc gcatcggcga
    26521 agccacgcac cagcatgacc agcgccacca ccacgtacat gatgccgatc ttcttgtggt
    26581 ccacggtggt gaaccagtca cgccacagcg ggccccacag cttgaagtac gtcaccgcgc
    26641 cgagcagcgc gaggccaccc agcaccatgg ccgccaatgt gaccaccacg atcggctcgt
    26701 gcagcggcac ggcctcccac gtcaatttac ccaacatgtt cgttactcct gggaaacctg
    26761 ggcaccaccg gcagcgcccg ccggggtggc ggcagcggtg ttctcaccca cgccgatgaa
    26821 ctggttgatg accttcttga acagcagcgg ctcgacactg gagaagtgct gtaccggtgc
    26881 attcttcgac ggcgcggcca gcgccttgaa ctggttgaaa tccagtgcct gcggcgcgct
    26941 gcgcacctcg gccacccagc gctcgaagtc ttcgttgctg ctggcggtgg cgatgaactt
    27001 catgttcgag aagccatgcc cgctgtagtt gccggacatg ccgcggaact ggcccggctc
    27061 gttggcgatc aggtgcagct gcgtgcgcat gccggccatc gcatagatct gcccacccag
    27121 ctgcgggatg aagaaggtgt tcatcgtcga gttggaggtg atgttgaacg ccagcgggcg
    27181 gttggccggg aagttgagct ggttgaccgt ggcgatgccc aggtccgggt atacgaacac
    27241 ccacttccag tcggtggcga tcacgtccac gtgcagcggt tcgccagcca cgtccagcgg
    27301 cttgtacggg tccagttcgt gggtggactg ccagacgatc accgccagta ccgcgatgat
    27361 gaccagcggc acgccccaga ccacgatctc caccttggtg gagtgcgacc agtccggcgt
    27421 gtatttcgcc ttggtgttgc cggcgcggaa tcgccaggcg aacacaaagg tcagcacgat
    27481 ggccggtatc accacgatca gcatcaggcc gatgcagatc aggatcaggt cgcgctgggc
    27541 gagcccgacc atgcccttcg aatccagcag cacccagtca cagcccgaca ggccgacgca
    27601 ggccagggcg accagcgcca ggcggatgcg gttccagcag atattcattg gaggtcaacc
    27661 ctgttgaaga agcgcgcttg accggctcgc ctgcgcgcag cgcccgggcg tggagcggct
    27721 acactgtggg tacgaggtcg cctacaaaaa ggcgatccac tccaatcaag cccatacaag
    27781 atacatgatt gtatggactt gtgcatctgc acgtatggaa aaatctgacc gatgacgcct
    27841 cctgccgccg gccgccgcct gaaacatccc aaccgcacct gggttcgccc cttccgcgag
    27901 ggcgccggac cgctgtacct gcagattgcc cagcaggtgc gcgaggcggt ggatgacggc
    27961 gtgctgcgcc ccggcgaccg cctgccgccg cagcgcgacc tggcccaaca ggtgggcgtg
    28021 gacctgacca ccgtcacccg cgcctttgcc gaacttcgtc aggccggcct gctcgatgcg
    28081 cagggcgctg gcggcacctt cattgcactg tcggccggca accgcagcac ctcggtcgac
    28141 ctgagcatga acatcccgcc gctgctgggc agcgccccgt tcgcgcaggg catggaagcc
    28201 ggcttccagc acgtgggcca gcagctgggc cagggcgaac tgatgagcta ccacgtcggt
    28261 gccggcaccc gcgaggaccg cgccgccgcc gtgcagtggc tggcgcccat gctgggcacg
    28321 gtggaggccg accaggtggt gatctgcccc ggtgcgcaga ccgcgctatg tgcactgatc
    28381 ctggcccgta cccagccggg cgagctgatc gccgccgaac agctgaccta ccccggcctg
    28441 ctggccgccg cgcgcgtgct gcagcggggc gtggtgccgg tggcgatgga cgccgaaggc
    28501 atgctgccgg acgcgctgga agaagcctgc cagctgcgcc gcccgcgcct gctgtacctg
    28561 gtgccgacca tccagaaccc gaccacggcg acgatgtcgg cacagcgccg gcaggcgctg
    28621 ctggcggtgg caaagcgcca cgatctgacc gtgatcgaag acgatcccta ctggttgctg
    28681 gccggggacg ccgcgccgcc gctggccgcc caccgcgacg ccggctgccc ggtctattac
    28741 atctccaccc tgtccaagtg cctggcgccg ggcctgcgca ccgcctatct ggtggtgccg
    28801 gccggcgagc cgatggaacc ggtgctggat gcgctgcgcg cgatcgcgct gatgccgacc
    28861 cagtcgatgg tggccgtggc ctcgcaatgg atccgcagcg gccaggccca ggacatggtg
    28921 cagcgcttcc agcaggaact gcgcgaacgc caggcgattg ccgcgcagta cttgccttcg
    28981 cgtgcccgcg cccatccggc cggcctgcat gtctggttgc cgctgccgcc acggctggac
    29041 cagtaccggc tgatccaggc cgcgcaggaa caaggcctgg gcattgccag ctcagacgcc
    29101 ttcagtgtgg aggaaccgcc accgggcaac gccatccgcc tgtcgctggg cggcgcggtt
    29161 gaccagggtg cgctggccgg ggcgctggcc aagctgaacg agatcctgtc cgaagccccc
    29221 gaagcgcggc acagcgccat cgtctgaacc gtgcgcatgg cgcgccatcc atacaagatg
    29281 atattttgta tgcaatgtat ggatgaaggg acgagcgtcg atgcgcgtcg agaaactgaa
    29341 gttccacctg gtgatggccg ggtgcggtgg ctttgtggtg ctgatgctgg ccgcgctggc
    29401 ctgggtctgc ctgcagccgc agaccgtgga tgtgcaggcc gccgagcgcc acgccatcga
    29461 gcagtgcgtg cagcgcagcg aggatccggc gcgtagcgag atccagcgcc gcgcgcaggc
    29521 cgactcctgc cgcgagatgc gcaagcagta cgtgcacaag ttcggcggag acgcgtcctg
    29581 atgggcgcag ccgcgccgcg cgcgcgccgc tggctgctgc cgacgatgat cgccctcgcc
    29641 tgcctgttca tggccggcgt ggcggcggcg ttgtggcagt acttcggcta cggcgcgcaa
    29701 tccaccttca ccgaacaggc catcgtcttc gacgactcgc agctgcgcct gccggccaat
    29761 ctggccggcg ataccggccg catccgcgtg gtgcatttct gggacccggc ctgcgcggtc
    29821 tgcaaccgcg aaaccggcgc acacctgagc tacctgatca gcatgtaccg ccgcgccggc
    29881 atcgacttct atgcgatccg ccgccccggt accgagggcg aactgcccga gccgctgcgc
    29941 agcaaggtga tccagctgcc gaccatcgac ggcatcgaac acattccggc cagccctgcg
    30001 gtggcgatct gggaccggca gggccacctc gcgtatgccg gcccgtacag catcggcatg
    30061 gtctgcaact cggccaacag cttcgtcgaa ccgctgctgg acaaactggt gcgcggcgaa
    30121 accgtacgcc cgaaaggact gcttgccgtg ggctgttact gcccctggca cgccccgcgc
    30181 tgaggacgcg caatgacttc accgagactg gccggcgcga ccgccgtaaa caacaacggc
    30241 ggtcacctgc ccgaaccgac cgatggttat ggacaggctc ccgccgttgg aagcaacgat
    30301 acgccccgac atgctcccta catgccgcga ccggatgtcg cagcccgcga atgggtacag
    30361 gacgtgctcg cgcacactgg gccgatctac ctgcgcatcg tcaattcgct ggaacgcacg
    30421 gtgcgtcgcg gcggccttgc accaggacaa cgcctgcctt cgcagcgcgc actggcgctg
    30481 cagctcggcg tcgacctgac cacggtcacc cgtgccttcg atgaagcacg caagcgcggc
    30541 ctgatcgagg cgcgcggtcc gcagggcagt ttcatcgcac cgcccaaggc cggcttcgag
    30601 caggtggtgg acctgagcat gaacgtgccg ccggtgcccg atgccgatgc actggccgag
    30661 acgctgcgcc gtggcgccgc cgccgtactt gcgcgcagca acgcgcccaa cctgatgacc
    30721 taccacctgg gcggcggcaa cccgaccgat cgccatgcgg cggcgcgctg gctgcggccg
    30781 atgctgggca ccgtggacga cgcctgcctg ctgctgaccg aaggcgccca ggtcgcgctg
    30841 gcggcgatcc tgctcagcca gagccgcgat ggcgatgcga tcctgtgcga cacgctggtc
    30901 tacccggggt tgctgcaggc agcggccgca ctgggccggc gcctgctgcc agtggacagc
    30961 gacgaacacg gcatgtgccc cgaggcactg gcccggcagg ctcgcgaaag cggcgcgcgg
    31021 ctggtctatc tcaatccgac ctgccagaac ccgacggcgc tgaccctgcc actgcagcgg
    31081 cgcgaagcgt tggcgcgcgt actggaacgc gaaggcctgc tggcggtcga agacgatccg
    31141 tactggcacc tggccgagga cgcgccgaca gcgctggcaa ccctggcgcc gcgccacgtg
    31201 ttctacgtgg ccacactgtc gaaggtgatc agccccggcc tgcgaaccgc gttcgtgcaa
    31261 tgcccggatg cggcgcatgc cgagtcgatg acggccgcgc tgcgagcgac ccgcttgatg
    31321 ggtcatccgc tggtgtcggc gctggccagc cagttgctgc tggatggctc ggcgcaatcg
    31381 ttgctggcgc aggtacgcag cgaggcgcgc gagcgcatgc gcatggcgcg ctatctgctg
    31441 gcaccgtcgc tgctgcagcg cgccgagggc ctgcatgcct ggtgccgggt tccggcgccg
    31501 tggaccgatg ccaccttggt acgcaccgcg cagctgcagg ggctggccat tgcgccgtca
    31561 tcggcattct gcccgcccgg ggtgctgcat cagaacggcg tgcggctgtc actggggctg
    31621 gcggcggacc gccggcaact ggaaagtgcg ctgcggcgga ttgaccggtt gttgttgtcc
    31681 gatgcgttgc cggcgatcga gcggta
//
LOCUS       DAOKIP010000025        31294 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.025,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000025 DAOKIP010000000
VERSION     DAOKIP010000025.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 31294)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 31294)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..31294
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.025"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(79..348)
                     /gene="rpsT"
                     /locus_tag="QEL58_001057"
     CDS             complement(79..348)
                     /gene="rpsT"
                     /locus_tag="QEL58_001057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019184515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S20"
                     /protein_id="HDS1675557.1"
                     /translation="MANIKSAKKRAKQTVVRNARNVAQRSMLRTAVKKVIKALDANDA
                     AGAEAAFAVAQPILDRFSARGLIHKNKAARHKSRLNDRIKALKAA"
     gene            466..2070
                     /gene="murJ"
                     /locus_tag="QEL58_001058"
     CDS             466..2070
                     /gene="murJ"
                     /locus_tag="QEL58_001058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004148451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein biosynthesis integral membrane protein
                     MurJ"
                     /protein_id="HDS1675558.1"
                     /translation="MLRGLLSFSSMTMVSRVLGLVRDFVVTTTFGTNAITDAFWVAFR
                     VPNFLRRLFAEGSFATAFVPVFTEVKETRSHAELRELMARTAGTLGGVLMLVTALALI
                     FAPQLASVFSSGVDTDPVKQGLLVDLFRLTFPFLLFVSLTALAGGALNSFQRFAMPAL
                     TPVILNLCMIAGALWLAPRLGGTPEKQILALGWAVLAAGILQLLFQLPSLKGINLLTL
                     PRWGWSHPGVRKVMTLMVPTLFGSSVAQINLLLDTVIAAKLTDGSQSWLSLADRFLEL
                     PLGVFGVALGTVILPALARHHVSTDREGFSRSLDWGLRMTLLISVPAMLGLLLLAEPL
                     IATIFQHGQFSAFDTRMTALSVYGLSFGLPAFALLKVVLPAFYARQDTKTPVRAGIAA
                     LVANMVFNFALLAVLYQVMVPDELKAQGVMAAIGKQPGLHLALGIASALSSYLNLGLL
                     WYWLGKTDVYQRRPGWGGYLLRLLLACLAMVGVLLALLYWLPGFSAMSVWERIGALAL
                     LVGGGGATYALAMVAMGFRPRDLRGH"
     gene            2146..3093
                     /locus_tag="QEL58_001059"
     CDS             2146..3093
                     /locus_tag="QEL58_001059"
                     /EC_number="2.7.1.26"
                     /EC_number="2.7.7.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017354920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional riboflavin kinase/FAD synthetase"
                     /protein_id="HDS1675559.1"
                     /translation="MSRLFRSVEGGELFPNGSVVCIGAFDGLHLGHRALVRHAVARAR
                     ALGVAAVAVAFEPLPREFFAQGTPPPRLTLARSKVEILRELGVDAIGLLRFDAAMAAM
                     PAEDFVRRLLVHRLGAREVWIGPEFCFGNRRRGDLALLQKMGAELGFSAGEIEAVDLH
                     GERISSTRIRQLLQDGDFARAGDLLGRPYAISGRVVRGRQLGRTLGFPTANLRFPKTP
                     ALSGIYATWVHGVFDQPWPSVSSFGTRPTVDGVEPLLEAHLFDFQGDLYGRHIDVEFV
                     AKLRDEEKFNDLAALTDQMHRDAEQARAILSEHRLRATA"
     gene            3090..5921
                     /gene="ileS"
                     /locus_tag="QEL58_001060"
     CDS             3090..5921
                     /gene="ileS"
                     /locus_tag="QEL58_001060"
                     /EC_number="6.1.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005928804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoleucine--tRNA ligase"
                     /protein_id="HDS1675560.1"
                     /translation="MSQDYKTTLNLPATEFPMRGDLPKREPGILAQWEAQGLYQQLRD
                     NAAGRPLFVLHDGPPYANGRIHLGHAVNKILKDIIVKSRYLAGFDAPYVPGWDCHGLP
                     IEIAVEKKWGKVGTKLDAVEFRQKCREFAEEQINIQRVDFKRLGVTGDWDNPYKTLSF
                     DFEANEIRALAKVVANGHLVRGAKPVYWCFDCGSALAEAEIEYQEKESPAIDVAYAAR
                     DAQAIGQAFGVSVPADVEVAVPIWTTTPWTLPASLAVSLGAEINYVLAEGPAHNGKRR
                     WLVLAAALAERALQRYGVDEVVLHGETTGAALENQLLAHPFYPEREILVLNGDHVSDE
                     DGTGAVHTAPGHGQEDFVVSQKYGLLDKYNAGQVTPIDGRGVYLESTPPAGDVVLAGQ
                     HLWKAQEAIVGVLRDNGSLLAFHPIRHSYPHCWRHKTPVVFRATPQWFISMDKANLRT
                     DALAAIDTVGWFPAWGKARIQSMVDGRPDWTISRQRTWGVPIALFTHRQTGEIHPRSV
                     ELMQQVADRVEAEGIDVWYSLDAAELLGAEAADYEKVTDILDVWFDSGVTHEGVLAAR
                     GFGKPADLYLEGSDQHRGWFQSSLLTGVAIDKRAPYKQCLTHGFTVDEHGRKMSKSLG
                     NGIEPQDIMNKLGADILRLWIASADYSNEMSLSQEILKRNADAYRRLRNTARFLLGNL
                     DGFDPAQHLQPLNQMVALDRWIVHRAWELQEKIKAAYDGYNMAEIVQLLLNFCSVDLG
                     SLYLDVTKDRLYTMPTDSHGRRSAQSAMYHIAEAFTRWVAPILTFTADELWGYLPGER
                     AGHVLFTTWYDGLAPLPADAQLNAADFDQLLAVREQVAKVLEPMRANGAIGAALEAEI
                     TIAASEEQAAKWQPLADELRFLFISGDVQVRPATTDEVFVSAQPTTKAKCVRCWHHRA
                     DVGSNADHPELCGRCVSNITGAGELRSWF"
     gene            5921..6445
                     /gene="lspA"
                     /locus_tag="QEL58_001061"
     CDS             5921..6445
                     /gene="lspA"
                     /locus_tag="QEL58_001061"
                     /EC_number="3.4.23.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019337504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase II"
                     /protein_id="HDS1675561.1"
                     /translation="MSTARPHPNALVWLLLSAAIIGLDQWSKAWVLSSLPEFQPVVVI
                     DGFWNWYRTYNTGAAFSFLSDAGGWQKYFFTALAIAISGLMAWWLRGTARGNWKAAVP
                     YALIIGGAIGNVIDRQVHGHVVDFIQWYVGSYTWPSFNIADSAIVVGAIGIALFGLFD
                     GKSAKKADNANPKP"
     gene            6473..7423
                     /gene="ispH"
                     /locus_tag="QEL58_001062"
                     /gene_synonym="lytB"
     CDS             6473..7423
                     /gene="ispH"
                     /locus_tag="QEL58_001062"
                     /gene_synonym="lytB"
                     /EC_number="1.17.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017907393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-methylbut-2-enyl diphosphate
                     reductase"
                     /protein_id="HDS1675562.1"
                     /translation="MDVLLANPRGFCAGVDRAIEIVKRAIETLGAPIYVRHEVVHNRF
                     VVDDLKQRGAIFVEELDEVPDNNTVIFSAHGVSQAVRQEAERRGLKVFDATCPLVTKV
                     HFEVARHCRAGRDVVLIGHAGHPEVEGTMGQWNREAGTGQIYLVEDVEQVATLQINQP
                     ENFAYTTQTTLSVDDTRGIIDALRERFPAMQGPKNDDICYATQNRQDAVRDLAKRCDL
                     VLVVGSPNSSNSNRLSELARREGVESYLIDGAHEIDPAWVAGKQHIGVTAGASAPQVL
                     VDGVLARLAELGATGVGELDGEPESMVFALPKELRLRLVD"
     gene            7631..9520
                     /locus_tag="QEL58_001063"
     CDS             7631..9520
                     /locus_tag="QEL58_001063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014646379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M61 family metallopeptidase"
                     /protein_id="HDS1675563.1"
                     /translation="MKTRALAMSLLFALAATPALALAQAAPPANAAAPGLLRIDVDAR
                     DLARRIFKVTATVPAKPGPMTLLYPQWIPGNHSPTGPIDKLAGLRVTANGKPLAWQRD
                     QFNVYAFKVDVPEGVSEIVAHFDFLSSQGGSQGRVVMTPEMLNLQWNANSLYPAGIDA
                     RQLQAQASVTLPKGWSFATALETARRDGDTVVFKPISYDHLVDSPLFAGEHYQRIDLD
                     PGAKVPVHLNVFADDAKSLKPTDAQIKLHRALVQQADKLYGARHYNHYEFLLALTDRL
                     GGIGLEHHRSSENSAEPGYFTEWDKSAWMRDLLPHEYTHSWNGKYRRGADLATASFNV
                     PMGDSLLWVYEGQTQFWGQVLAARSGLWSVEQARDMLANVAATYDRGRPGLAWRPLQD
                     TTNDPTIAQRRTLPYRNYQMSEDYYSGGQMLWLEVEGKLRELSGNRRSLDDFARAFFG
                     VGNGDWDVNPYTFDDVVATLNGIAPYDWATFLRGRLDGHGPLTGGLALAGWKLVYRDT
                     PNAAYKAQEKRAKGALLAYSLGATVLDSGTVSDVIWDSPAFNAGLAPGMKVIAVGGRE
                     YSSQRLKDAVADAARDKAPIVLLVKQFDRIDTMNIDYHGGLQYPVLERIAGTPDRLAE
                     LWKAR"
     gene            9517..10182
                     /locus_tag="QEL58_001064"
     CDS             9517..10182
                     /locus_tag="QEL58_001064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004148527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysoplasmalogenase"
                     /protein_id="HDS1675564.1"
                     /translation="MKARARDGMILLVTILAIIGAYLHGDGRWLHWLAKPATTLLIAG
                     IAWQVHTPAQPFYRRAVLAGMLLSCVGDIALMLPIDAFVPGLIAFLLAHLCYIAAFRD
                     GLRGGRGLVAASVLLGAFAALNVLGLWPHLPAPMRIPVLAYVVVLASMAVLALARAWV
                     RPQVAAPEPCSARWAAAGAVLFVASDSLLAWDRFAGGLPLASLLVLSTYYAAQYAIAR
                     SVK"
     gene            complement(10270..13056)
                     /locus_tag="QEL58_001065"
     CDS             complement(10270..13056)
                     /locus_tag="QEL58_001065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005412637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDS1675565.1"
                     /translation="MAGPGALQWGLLRPLLCLVLLATALPAATASESAATHAYRIDAG
                     PLPSALQQWARQSGIALLFDARELAGLHTDGANTRTDPATALKQLVAGMPVTILRTPS
                     GGFVVRRVGAAPIATTPTPKAVVAPRHDAPRPPPQVELAPIHVTGSRLPRTSVQTTLP
                     VTTIDRDDILRSGYGSLFDLLRHLPGMNGLPAMSSARSGDSQYLPVGAAATTSLDGMG
                     PRATLFLVNGRRLPRYPMVSLEQGGLTDLGGIPLSFVERIELVRGGASAIYGADAMSG
                     VVNIILRDQADGPEAMLQTGLSSRGDAAQYRLQAATGGLRGNGDRWFAGVDLHRVDHL
                     AGDRRDWHAETSQYLIGAFGAGRYWPARRCEGPLKRRDGACWFDSARPRSLQPASDTA
                     SAYLRYRHERGEGRYAYAEARASHNRQRFDLGPTAVSLALYGITFNTVLREAGNVRPH
                     VRATDADVTFGIGRDQGRRSWDAGLSAQRSDISLSTPGTVRATPLIEAAQSLRFLPGF
                     DMLPSDETASWFPMIRNRGLTEQWQGWWGMQRELMPLPGGNAQLATGIDLRHERWTSH
                     PDALLSQGDLALGLPQQQRRLSRQSGGAYAELGLPLAPALRMDLAARWDRDGDYTAVS
                     PRAGLRWTPSPQWSFLLASGRGYRAPSLFEQRRPPGQFGTLTLPASDALPPCAQSAAD
                     GRCRVTADVEENTMLKAESSRSHSLAATWSPNDAFSLSLTHNIVELRNEILALQPNDA
                     VWNRDTWQLDEQGRLRSLRLSFDNIGRTTSRNWVLRGEYRIDTGSNGQWLFSLDALKQ
                     QELRRQRDHEPAIDLRGHVTPEMAAVLNVQWQNSHWDIALRGNQVGRTRAWLPGAECP
                     QDQVEQNHCMNPRQLRWNLHLARRLGPRIVAALDVHNVLDTQPVNYLVGNGGQMPGLD
                     DPLGRYYLLTLQFR"
     gene            complement(13071..14039)
                     /locus_tag="QEL58_001066"
     CDS             complement(13071..14039)
                     /locus_tag="QEL58_001066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005408571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FecR domain-containing protein"
                     /protein_id="HDS1675566.1"
                     /translation="MNHYRHTEDASLFERASAWVARLEAPDCTPAERKTFEDWLAENP
                     AHVKAWVQAENLFQQGQGLAADPWLRTAAARAARPPRRRWLPAFAAAAGICLAIGVGW
                     MLAVDGNPTPQRYANDSHETQQLTLADGSVATLDAGTTLHARFGWRHRELDLERGRLQ
                     LQVAPSNKALQLRAGTSTIRDIGTTFQVERLRDGLVEVALLEGAVEVSNGAAQHTLAP
                     GQQLQVLPSGRIQPGPALSSTAAAEGWLQGQLVFDATPLSIVVERMNRYGRTPLVIAD
                     PEISNLAVSGTFRAGDAQELLSALELGWSVAGQTRPDGALELRRTY"
     gene            complement(14036..14563)
                     /locus_tag="QEL58_001067"
     CDS             complement(14036..14563)
                     /locus_tag="QEL58_001067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HDS1675567.1"
                     /translation="MPADAFIAFVREERAPLCAFLRTRGVGPEDAEDIAQDCMERLIR
                     YRAHGADELRLLLYRIARNRLADRGRSAQSRPHLPLAEHDGSDQPTSQSPDPLRQAES
                     GQMLSLLRQALFKLPERAREVYLLNRITGMSYTQIARHCGITAKTVEKHIARALQGLR
                     QELGPDPLHNDRDVE"
     gene            14799..17672
                     /locus_tag="QEL58_001068"
     CDS             14799..17672
                     /locus_tag="QEL58_001068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
                     /protein_id="HDS1675568.1"
                     /translation="MKHSKLSLALAGLIGVGALAAADDVMAMSYHLQGDRIFLSGGVT
                     YADVVSLPALLAKAQAEGRPIREVVLRTSNGGALIAGEWLQGVIRTAGLNTIVSGHCI
                     SSCSIMQSGGVQRYLAGDLPIVDSVQIHAASSGGKVIYTPSPRMTQIYTGNYGGGMDA
                     GLLHKAMYEVVQPNGLLVFRDPARTTGASVTFDPDGSGSKLESFPGQDIHSNNIITAN
                     GYRDPGDTLNVSANVSGDINPGYLRTGRQLQTFVDDDFARWNTNWQSSYINLAQSIYN
                     ASSRGPQGIGPDSVQDYLNDPGIQALLLSKLRLADLDVSTLDNAMGVIRVSNGATWRT
                     AATTGADFMLVDNGTIALEGGALRASEVRVLGAGMLVGHGDVAGTAMDLDALGSGSGP
                     SWREDGFNRLRVFGTLMPRGGDLVTHGYVNIMPGGKLLFDVTENGGAATGRLRVGTFF
                     DDEPTDGALVISKGAFLELNVAQGYYGQDFRRDLVKGPIYQGGFEDVVRLGDTGYSAS
                     ITAGDVFRPRHNSLLSFNVKQTADGLWLTANPGFDQLGLFTNATSGDGLGRALATASA
                     RQDGNLKSLLGALQFADRDVIAQQAGALRGDAHASLRLADNALVGSIGNVVQQHQAAM
                     RSGGDADGLASQAAQSVSAQPGMRHGSLFNQLAMHLVEPASGSAAGSGDAGRNRGIWA
                     RGFASHGRIDAEGGVAGLSHNIGGIVVGADTRVADDRVTLGVSVAAADMSTKGRDGSD
                     FSGDVRALDVGGYLDATYSRGYLSAAVRYTDLRHDTRRSISGIDGLQQPLRAKYNNDA
                     ISARVEHAFSFTTGNGLVIQPLLPVVDYARTSATRFNEGQGAGALVGRSGSLESIRVG
                     AGLQLFKTFEGNNGERITPRARVVWQKELGDAQARYSTGFAAAPDLVFGASSQAVGEQ
                     VLAWNLGVTSRASERLSIMADYVGERRDGQIQNGVMLGLGYRF"
     gene            17770..18774
                     /locus_tag="QEL58_001069"
     CDS             17770..18774
                     /locus_tag="QEL58_001069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014036390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxyacid dehydrogenase"
                     /protein_id="HDS1675569.1"
                     /translation="MQIAVFSARPYDRRFLDEANQRDADGQGYAFVYFDAALDVHTAA
                     LAQDCAAVCVFVNDRLDAPVLHALHAFGVRAVLLRCAGFNNVDLAAAKALGLFVARVP
                     AYSPEAVAEHALALVMTLNRQTHRAYNRVREGNFMLDGLLGRTLHGRTVGIVGTGKIG
                     LATARIFKGMGCTVLGHDPYPSPAFAGVGDMVALDELLARADIVSLHCPLTPDTQHLI
                     NDASLARMKPGAMLVNTSRGALVDTHAVIRALKSRRLGHLAIDVYEQESALFFQDLSG
                     EIIDDEAFQRLMTFPNVLVTGHQGFFTVEALQEISAITLGNLADFAAGRPCTNRVEAG
                     "
     gene            18825..18900
                     /locus_tag="QEL58_001070"
     tRNA            18825..18900
                     /locus_tag="QEL58_001070"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:18858..18860,aa:Thr,seq:cgt)
     gene            19183..24054
                     /locus_tag="QEL58_001071"
     CDS             19183..24054
                     /locus_tag="QEL58_001071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="wall-associated protein"
                     /protein_id="HDS1675570.1"
                     /translation="MLSRVAHRLRLRCAAKSLLLLSMLASGLLAPLAAQAQIVPTWRE
                     EYGKRLKYGDLVEPLKGEIFGEKINLYDGSVSFSATDISLPGSNGLDVSISRSYGDIG
                     GSRGDKEFGNWTLDVPSLSGIYGDQPETVSEGYWSPRARCSTVAAPPTLKVWNYRHTQ
                     TINFDPHTYWDGVRLTLPGGNGETVLAGSNDAKQPRPQVGQPTPWNTKGGWFFSCLAS
                     LKSGQPGEGFLGHSPDGNKYYFDWMVARDEDSAVLQPYDTVTHATLKRRKVFLYPSQV
                     VDRFGNWVRYEWNGGQLQRISASDGRSISLAYDAQGRVVSASAGGRTWTYGYKPQGDL
                     QTVVLPDGTYWSYNLPPVGVTKKYPDYFGQPESAYMETPAMCAKTNKIVQTEVVISIK
                     HPSGVVGAFAFRPFRHGRKNVPFNCQTSGDDQLLADGWNLTPIYRDAMSLVARTIEGP
                     GVPRASWTYQYANLGWKYNREVHQQGWPMVPVGQSEPKITIETQPDGVVKTYEFGKEV
                     AYNDGLLLATSTSSGGTVVRTDRSVYYPDAELATAPFPRAAGRNLKYGATELGEHLNR
                     PVQSTLITQDGVQFTRTVQAFDPSVREIEVAESNSNGQGRSTSTQYYDNPQLWVRGQV
                     ARSLVNGIEQSRTEFDAATAQPVRAYIFGRLAQEVTYAADGNVASVKDGNGNTTRLER
                     WKLGIPQWIIHADSTVTRAAVNDSGWITAVADENDYLTQYEYDGMGRLTRVEYPSDDS
                     VAWNEKRQALEWVPVNEYGIPPGHWRQTTATGNARKITYFDALLRPMLTQEFDAGNQA
                     ATQRLQLFAYDAQGRQTFSSYPVSDFPVPWKGTWNEYDALGRVTSSSQDSEHGLLTTL
                     TEYLPGGQMRVTNPRGQVTQTRFQMFDAPSYEHPVSIQMPEGAVMNIARDVFNKPLII
                     TRGNADGSQTVARRYVYSPSQQLCKTIEPETGSTLMDYDGAGNLIWSASGVDSPSPLT
                     CNTEAISSSGRAVYREYDARNRPIYLRFPDGNGNTSWTYTPDGLPSRLLVRNDSGATT
                     ASNHYFYNKRRLLTVERVSQPDWNDWPIIYSYNANGHPSGQTWPSGLTVDYAPDALGQ
                     ATRVGNFATDVRYYANGGIKQFTYGNGIVHTMQQNERQLPSRTTDSGVLDFDTRFDRN
                     GNVSDIYDLALGAFYNRHMLYDGLDRLIAAGSNNFGGDSWHRFSYDALDNLTSWMLPG
                     VKDHRYWYDAHNRLTNVRDGAGNTLIGLSYDVQGNLKLKNGLNHSFDFGNRLREVTGK
                     ETYRYDALGRRILASAPGLGVVLSQYAQDGRLVFQSDGRKGLGREYVHLAGSLIARRD
                     YAGADAKITYLHTDALGSPVASTDASGNVIERTHYEPYGAPIGKVVDGPGYTGHVMDG
                     ETGLVQMQQRYMDPLLGVFLSVDPVTAYEQPVRQFNRYRYANGNPYRFTDPDGRLSRG
                     TGWTDRQWKKFDRAQQSAAGSLEKAAGKITRAMGEGGKSLQRAEKAFERNFGAGSATA
                     ENMSKTASDMSSMAAALRDTSAGAIPANGMTGAQITATYGGGGDTLAGVPTAGPKMVI
                     INTTHAGFNDSSRLAWGAGHEAGHAVLGYKDQFFNGDTAYKFGTPQQQSIFGALPSEQ
                     RLINPDHIMDQAR"
     gene            24051..24482
                     /locus_tag="QEL58_001072"
     CDS             24051..24482
                     /locus_tag="QEL58_001072"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675571.1"
                     /translation="MKKLLAATLLCTLIPACATQLRRADSKDFSVSVTDRATEKRYDV
                     VLASAADETLCLSKESWPIENGTFPTGYEGAILTTTDGPLHPKAAMTAYCPGGCGEVH
                     LEPGQALRASIAYAAFGDAEVIAADAARSLSFSVYPYYCER"
     gene            24618..25073
                     /locus_tag="QEL58_001073"
                     /pseudo
     CDS             24618..25073
                     /locus_tag="QEL58_001073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659280.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            25597..25818
                     /locus_tag="QEL58_001074"
     CDS             25597..25818
                     /locus_tag="QEL58_001074"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675572.1"
                     /translation="MIEIAAKHSFQLPEEGFMNLVESDRELLVDALLRELLETGLRAD
                     DEPNQRGLEIEEIIDFVASIPDSPDAPSG"
     gene            26556..26912
                     /locus_tag="QEL58_001075"
     CDS             26556..26912
                     /locus_tag="QEL58_001075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008267900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675573.1"
                     /translation="MTTRKIPPFPVDEPTNDDDNPSFDLSTFQGCLKRIRDGEGSDGM
                     LWPEENLSDGRRQSLARIDRAAVGMLTAVEMLHAASRCESMATPDRHLDEGVVEGLFF
                     ACRELAELVCREVRPS"
     gene            27228..28268
                     /gene="cyoA"
                     /locus_tag="QEL58_001076"
     CDS             27228..28268
                     /gene="cyoA"
                     /locus_tag="QEL58_001076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012479523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinol oxidase subunit II"
                     /protein_id="HDS1675574.1"
                     /translation="MIPLKTLGRWLRPGLLLSLLVMLTGCDAVAILSPKGQIGQDEKT
                     LLITATVLMLLVVIPVIIMTLTFAWKYRASNTKARYEPKWSHSTAIEVVVWSIPCMIV
                     LVLAVLTWRSSHALDPYKPLESDVKPVTIEAISLDWKWLFIYPEEKVAVVNEIKFPVN
                     TPLNFKITSDSVMNAFFIPHLGSMIYSMAAMETKLHLIANETGEFPGMSSHYSGAGFA
                     KMHFTAYSVTDAEYRQWLDQVRAGEQTLDKASFKALGEARNAEWYPVTYFGKTEEGLF
                     NWVIAKHMGDNKHYGMKHEHAGAAAADAASHEAHEGHAPSDAHDSKESGENLDANEHE
                     HAGHAGHAGSGE"
     gene            28271..30268
                     /gene="cyoB"
                     /locus_tag="QEL58_001077"
     CDS             28271..30268
                     /gene="cyoB"
                     /locus_tag="QEL58_001077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome o ubiquinol oxidase subunit I"
                     /protein_id="HDS1675575.1"
                     /translation="MLGKLSIESIPHDPIVLTTLVGAVLGGLGVMALITKFKLWGYLW
                     KEWFTSVDHKKIGVMYLIVAFVMLLRGFSDAIMMRTQQALAVGGSEGYLPPHHYDQIF
                     TAHGVIMIFFVAMPLITGLMNLAVPLQIGARDVAFPFVNSLSFWLFVSGAVLIMLSLW
                     IGEFAATGWLAFPPLSGIEYSPSVGMDYYIWGLQVAGLGTTLSGINFFITILKMRTPS
                     MKLMQMPVFTWTALVTNVLIVAAFPVLTITLVLLTLDRYLGTHFFTNDGGGNAMLYIN
                     LIWIWGHPEVYILVLPAFGVFSEVIATFSRKALFGYKGMVYATACIGVLSFIVWLHHF
                     FTMGSGANVNAFFGITTMIISIPTGVKIFNWLFTMFRGRVQFTTPVLWTIGFMVTFTI
                     GGMTGVMLAIPAIDFVLHNSLFLIAHFHNVIIGGVVFGMFAGITYWWPKMFGFRLNEF
                     WGKCAFWCWFIGFYVTFMPMYVLGFMGMTRRLQSTVNPAYEPLLLVAAAGAFIVGAGI
                     LCQIIQVAVSIRDRKKTADLTGDPWDARTLEWETSSPPAFYNFGTLPEVTELDDFWER
                     KQRGEAWPKPAKYTDIHMPRNTGTGVVIGAFSLVFGFAMIWHIWWLAIVGFVGMIATF
                     IYRTFDQDVDYWVPAAEVERIENEHRKHLENQGLVKSELKA"
     gene            30265..30903
                     /gene="cyoC"
                     /locus_tag="QEL58_001078"
     CDS             30265..30903
                     /gene="cyoC"
                     /locus_tag="QEL58_001078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019336792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome o ubiquinol oxidase subunit III"
                     /protein_id="HDS1675576.1"
                     /translation="MSTNTSTLSHGHAAHAAAHGHDDHEHHDTGGNTVFGFWVYLMSD
                     CLIFASLFATYVVLSGGTDGGPGAKDLFELPFVAWETALLLTSSLTFGLGMIAMHRKQ
                     MGQMYLWLAITWLLGFGFMCMEVWEFQHLIHQGYGPDRSAFLSAFFALVGTHGLHVSA
                     GLLWLLVMFVQLKKYGLTPTNKTRMACLSLFWHFLDLIWIGVFSVVYLNGAL"
     gene            30903..31244
                     /gene="cyoD"
                     /locus_tag="QEL58_001079"
     CDS             30903..31244
                     /gene="cyoD"
                     /locus_tag="QEL58_001079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017156584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome o ubiquinol oxidase subunit IV"
                     /protein_id="HDS1675577.1"
                     /translation="MAHDNHAHDHGTGGESHGTVKSYLIGFVLAVVLTVIPFWMVMSG
                     DFSRTVNGVVIAITAVLQMLVHLVFFLHLDRSSESRWNVNAAAFTVVVIGIIVVGTLW
                     VMHNMNVHMMH"
BASE COUNT         5343 a         9992 c        10333 g         5626 t
ORIGIN      
        1 tgcaggcaac aaaaaacccg gccaaggccg ggcttttgtc tgctgcccag ccccgaaggg
       61 cagggcggca acgccggatc aggcggcctt gagggccttg atacggtcgt tcaggcggct
      121 cttgtggcga gcagccttgt tcttgtggat caggccacgc gcgctgaagc gatccaggat
      181 cggctgggca acggcgaagg cggcttcggc gccggcggca tcgttggcgt ccagcgcctt
      241 gatcactttc ttgacagcgg tgcgcagcat cgagcgctga gccacgttgc gcgcgttgcg
      301 cacgacggtc tgcttggcgc gcttcttggc ggacttgata ttggccacgg tggtggtttc
      361 ctgaaaaaat cggtgttatg ggaacagcaa gctagctagt atgatggcgt aagaaatgca
      421 cgtcaagtcg attgtcaaga gggacgctga gtgagttcac ccaagttgtt gcggggcctg
      481 ctgtcgttca gcagcatgac catggtctcg cgcgtccttg gacttgtccg ggacttcgtg
      541 gtgaccacca cgttcggcac caacgccatc actgatgctt tctgggtcgc cttcagggta
      601 cccaatttcc tgcgccggtt gttcgccgag gggtctttcg ccaccgcttt cgtgccggtg
      661 ttcacggaag tgaaggaaac ccgcagccac gccgagctgc gtgaactgat ggcccgcacc
      721 gccggcaccc tgggtggggt gctgatgctg gtcaccgctc tggcgctgat cttcgcgccg
      781 cagctggcct cggtcttctc aagcggcgtt gataccgatc cggtcaagca gggcctgctg
      841 gtcgacctgt tccgcctgac cttcccgttc ctgctgttcg tctcgctcac cgccctggcc
      901 ggcggcgcgc tgaacagctt ccagcgcttc gcgatgccgg cgctgacccc ggtcatcctc
      961 aacctgtgca tgatcgccgg cgcgctgtgg ctggcaccgc ggctgggcgg taccccggag
     1021 aagcagatcc tggcgctggg ctgggcggta ctggccgccg gcatcctgca gctgctgttc
     1081 cagctgccgt cactgaaggg catcaacctg ctgaccctgc cgcgctgggg ctggagccat
     1141 ccgggcgtgc gcaaggtgat gacgctgatg gtgccgaccc tgttcggttc ctcggtggcg
     1201 cagatcaacc tgctgctgga cacggtcatc gcggccaagc tgaccgacgg ctcgcagtcc
     1261 tggctgtcgc tggccgatcg cttcctggaa ctgccgctgg gcgtgttcgg cgtggcgctg
     1321 ggtacggtga tcctgccggc gctggcccgc caccacgtca gcaccgaccg cgagggcttc
     1381 tcgcgctcgc tggactgggg cctgcgcatg accctgctga tctcggtgcc ggccatgctc
     1441 ggcctgctgc tgctggccga gccgctgatc gcgaccatct tccagcacgg ccagttcagt
     1501 gccttcgata cccgcatgac cgcgttgtcg gtgtacggcc tgagcttcgg cctaccggcg
     1561 ttcgccctgc tgaaggtggt gctgccggcg ttctacgcgc ggcaggacac caagaccccg
     1621 gtgcgcgccg gtatcgccgc gctggtggcc aacatggtgt tcaacttcgc cctgctggcc
     1681 gtgctgtacc aggtgatggt gccggacgaa ctgaaggcgc agggcgtgat ggcggccatc
     1741 ggcaagcagc cgggcctgca cctggcgctg ggcattgcca gcgcgctgtc cagttacctg
     1801 aacctgggcc tgctctggta ctggctgggc aagaccgatg tctaccagcg ccgcccgggc
     1861 tggggcggct atctgctgcg cctgctgctg gcctgcctgg ccatggtcgg cgtgctgctg
     1921 gcgctgctgt actggctgcc gggcttctcg gcgatgagcg tgtgggagcg gatcggtgcc
     1981 ctggcgctgc tggtcggtgg cggtggtgcg acctatgcgc tggcgatggt ggcgatgggc
     2041 ttccgcccgc gcgacctgcg cgggcattga tcgcggcccg tggcggctat acttcagggt
     2101 tacaccattg aagcggcggc cccggtcggg ccggaacgag agttgatgag caggctgttc
     2161 agaagcgtcg agggcgggga gctgttcccc aacggaagcg tggtctgtat cggtgcattc
     2221 gacggcctcc acctggggca tcgtgcgctg gtccgccacg cggtcgcccg cgcgcgcgcc
     2281 ttgggcgtgg ccgcggtggc cgtggcgttc gagccgctgc cgcgtgaatt cttcgcccag
     2341 ggcacgccgc cgccgcggct gaccctggcg cgcagcaagg tcgagatcct gcgcgagctc
     2401 ggcgtcgatg cgatcggcct gctgcgtttc gacgcggcga tggccgccat gccggccgag
     2461 gacttcgtgc ggcggctgct ggtgcatcgg ctgggcgccc gcgaagtgtg gatcggcccg
     2521 gagttctgct tcggcaaccg ccgtcgtggc gacctggccc tgctgcagaa gatgggcgcc
     2581 gaactgggct tcagcgccgg cgagatcgaa gcggtggacc tgcatggcga gcgcatttcc
     2641 agcacccgca tccgccagct gctgcaggac ggcgacttcg cccgcgccgg cgacctgctc
     2701 ggccgtccgt acgcgatcag cgggcgggtg gtgcgcgggc gccagctcgg ccgcacgctg
     2761 ggcttcccga ccgccaacct gcgcttcccg aagaccccgg cgctgtcggg catctacgcg
     2821 acctgggtgc acggcgtgtt cgaccagccg tggccctcgg tgtccagctt cggcacgcgg
     2881 ccgacggtgg acggcgtgga gccgctgctg gaagcgcatc tgttcgattt ccagggcgac
     2941 ctgtatggcc gccacatcga cgtggagttc gtcgccaagc tgcgcgacga agagaaattc
     3001 aatgatctgg cggcactgac cgaccagatg caccgcgacg ccgaacaggc gcgcgccatc
     3061 ctttccgaac atagattgcg agccactgcg tgagccagga ctacaagacc accctgaacc
     3121 tgccagccac cgaattcccg atgcgcggcg acctgcccaa gcgcgagccg ggcattctgg
     3181 cgcagtggga agcgcagggg ctctaccagc agctgcgcga caacgccgcc ggccgcccgc
     3241 tgttcgtgct gcatgacggc ccgccgtacg ccaacggccg catccacctc ggccacgcgg
     3301 tcaacaagat cctgaaggac atcatcgtca agtcgcgcta cctggccggc ttcgatgcac
     3361 cctacgtgcc gggctgggac tgccacggcc tgccgatcga gatcgcggtc gagaagaagt
     3421 ggggcaaggt cggcaccaag ctcgacgcgg ttgaattccg gcagaagtgc cgcgagttcg
     3481 ccgaagagca gatcaacatc cagcgcgtgg acttcaagcg cctgggcgtg accggtgact
     3541 gggacaaccc gtacaagacc ctgagcttcg acttcgaagc caacgagatc cgcgcgctgg
     3601 ccaaggtcgt ggccaacggc catctggtgc gtggcgccaa gcccgtgtac tggtgcttcg
     3661 actgtggttc ggcgctggcc gaagccgaga tcgagtacca ggaaaaggaa tcgccggcga
     3721 tcgacgtggc ctacgccgcg cgcgatgcgc aggccatcgg ccaggcgttc ggcgtgagcg
     3781 tgccggccga cgtcgaagtg gccgtgccga tctggaccac cacgccgtgg acgctgccgg
     3841 cctcgctggc cgtttcgctg ggcgcggaga tcaactacgt gctggccgaa ggcccggccc
     3901 acaacggcaa acgccgttgg ctggtgctgg ccgccgcgct ggccgagcgc gcgctgcagc
     3961 gctacggcgt ggatgaagtg gtgctgcacg gtgaaaccac cggcgcggcg ctggaaaacc
     4021 agctgctggc gcatccgttc tacccggagc gcgaaatcct ggtgctcaac ggcgaccatg
     4081 tctccgacga ggacggtacc ggtgcggtgc acactgcgcc cggccacggc caggaagact
     4141 tcgtggtcag ccagaagtac ggcctgctgg acaagtacaa cgccggtcag gtcaccccga
     4201 tcgacggccg tggcgtgtac ctggaatcga ccccgccggc cggtgacgtg gtgctggccg
     4261 gccagcacct gtggaaggcg caggaggcca tcgtcggcgt gctgcgcgac aacggttcgc
     4321 tgctggcctt ccacccgatc cgccacagct acccgcactg ctggcgccac aagacgccgg
     4381 tggtgttccg cgccaccccg cagtggttca tctcgatgga caaggccaac ctgcgcaccg
     4441 acgcgctggc cgccatcgac accgtcggct ggttcccggc ctggggcaag gcgcgcatcc
     4501 agagcatggt cgacggtcgc ccggactgga ccatctcgcg ccagcgcacc tggggcgtgc
     4561 cgatcgccct gttcacccac cgccagaccg gcgagatcca tccgcgttcg gtcgagctga
     4621 tgcagcaggt ggccgaccga gtcgaggccg agggcatcga cgtgtggtac tcgctggatg
     4681 ccgccgaact gctgggcgcc gaagcggccg actacgagaa ggtcaccgac atcctcgacg
     4741 tctggttcga ttcgggcgtg acccatgaag gcgtgctcgc cgcgcgcggc ttcggcaagc
     4801 cggccgacct gtacctggag ggttccgacc agcaccgcgg ctggttccag tcctcgctgc
     4861 tgaccggcgt ggcgatcgac aagcgcgcgc cgtacaagca gtgcctcacc cacggtttca
     4921 ccgtggacga gcacggccgc aagatgtcca agtcgctggg caacggcatc gagccgcagg
     4981 acatcatgaa caagctgggc gcggacatcc tgcgcctgtg gatcgcctcg gccgactaca
     5041 gcaacgagat gtcgctgtcg caggagattc tcaagcgcaa cgccgatgcc taccgccgcc
     5101 tgcgcaacac cgcgcgcttc ctgctcggca acctggatgg cttcgatccg gcccagcacc
     5161 tgcaaccgct caaccagatg gtcgcgctgg accgctggat cgtgcatcgc gcgtgggagc
     5221 tgcaggagaa gatcaaggca gcctacgacg gctacaacat ggccgaaatc gtgcagctgc
     5281 tgctgaactt ctgcagcgtg gacctgggct cgctgtacct ggacgtgacc aaggaccgcc
     5341 tgtacacgat gccgaccgat tcgcacggtc gccgttcggc acagagcgcg atgtaccaca
     5401 tcgccgaagc gttcacccgc tgggtggcgc cgatcctgac cttcaccgcc gacgagctgt
     5461 ggggctacct gccgggcgaa cgtgccgggc acgtgctgtt caccacctgg tacgacggcc
     5521 tggcgccgct gccggccgat gcccagctca acgccgccga cttcgaccag ctgctggccg
     5581 tgcgcgagca ggtggccaag gtgctggagc cgatgcgtgc caatggtgcg atcggtgccg
     5641 cgctggaagc ggagatcacc atcgccgcca gcgaagagca ggccgcgaag tggcagccgc
     5701 tggccgatga actgcgcttc ctgttcatca gcggcgacgt gcaggtgcgc ccggcaacca
     5761 ccgacgaagt gttcgtcagc gcccagccga ccaccaaggc caagtgcgtg cgctgctggc
     5821 accaccgcgc cgatgtcggc agcaacgccg accatcccga actgtgcggc cgctgcgtga
     5881 gcaacatcac cggcgccggc gaactgcgga gctggttctg atgagcactg cacgcccgca
     5941 tcccaacgcc ctggtctggc tgctgctgtc ggcggccatc atcggcctgg accagtggtc
     6001 caaggcctgg gtgctgtcga gcctgcccga gttccagccg gtggtggtca tcgacggctt
     6061 ctggaactgg taccgcacct acaacaccgg tgcggcgttc agtttcctga gcgacgccgg
     6121 tggttggcag aagtacttct tcaccgcgct ggcgatcgcc atcagcggcc tgatggcctg
     6181 gtggctgcgc ggcaccgccc gcggcaactg gaaggccgcg gtgccgtatg cgctgatcat
     6241 cggcggtgcc atcggcaacg tgatcgaccg ccaggtgcac ggccacgtgg tcgatttcat
     6301 ccagtggtac gtgggcagct acacctggcc ctcgttcaac atcgccgatt cggccatcgt
     6361 ggtgggggcc atcggcatcg ccctgtttgg cctgttcgac ggcaagtccg ccaaaaaggc
     6421 ggataatgcc aatccgaaac cgtaagccgg ccgctgccgg gagattgaac tgatggatgt
     6481 gctgctcgcc aacccgcgtg gtttctgtgc cggtgtcgat cgtgcgatcg agatcgtcaa
     6541 gcgcgcgatc gaaacgctgg gcgcgcccat ctacgtccgc catgaagtgg tgcacaaccg
     6601 cttcgtggtc gacgacctga agcagcgcgg cgcgatcttc gtcgaggaac tggacgaagt
     6661 gcctgacaac aacacggtga tcttcagcgc gcatggcgtt tcgcaggcgg tgcgccagga
     6721 agccgagcgc cgtggcctga aggtgttcga cgccacctgt ccgctggtga ccaaggtcca
     6781 cttcgaagtg gcccgccact gccgtgccgg ccgtgacgtg gtgctgatcg gccacgccgg
     6841 ccacccggaa gtggaaggca ccatgggcca gtggaaccgc gaggccggca ccggccagat
     6901 ctatctggtc gaggatgtgg agcaggtggc cacgctgcag atcaaccagc cggaaaactt
     6961 cgcctacacc acccagacca cgctgtcggt ggacgatacg cgcggcatca tcgatgcgct
     7021 gcgcgagcgc ttcccggcca tgcagggccc gaagaacgac gacatctgct acgccacgca
     7081 gaaccgccag gacgcggtgc gcgacctggc caagcgctgc gacctggtgc tggtggtcgg
     7141 ttcgccaaac agttccaatt ccaatcgact gagtgagctc gcccgtcgcg aaggcgtgga
     7201 gagctacctg atcgatggcg cgcacgagat cgacccggcg tgggtggcag gcaagcagca
     7261 catcggcgtc accgcaggtg cttctgcacc gcaggtgctg gttgacggcg tgctggcgcg
     7321 gctggccgag ctgggggcca ccggcgtggg tgagctggat ggcgaaccgg aatcgatggt
     7381 gttcgcgctg ccgaaggaac tgcgcctgcg cctggtcgac tgaccgggcc tgactctggt
     7441 gggtgcgaac cttggttcgc actgcttctg gatgcactcc atccacgcat ggcgtggatc
     7501 tactgctcac ggccttgttg ccgggtttgc cgcttctggc ggcgttcgcg cgggccatga
     7561 cctttggcca tggggccacg catcccacag gcctagcatc ggggaattct ccgctgttgg
     7621 acgctgcccg atgaaaaccc gagccttggc catgtcgttg ctgttcgcgc tggccgccac
     7681 gcctgcattg gcgctggcgc aggccgcgcc gccggccaat gccgcagcgc ccggcctgct
     7741 gcgcatcgac gtggatgcgc gtgacctggc ccgccgcatc ttcaaggtca ccgccaccgt
     7801 gccggccaaa cccggcccga tgaccctgct gtatccgcag tggattcccg gcaaccattc
     7861 gcccaccggc ccgatcgaca agctggccgg gctgcgcgtc accgccaacg gcaagccgct
     7921 ggcctggcag cgcgatcagt tcaatgtcta tgcgttcaag gtggacgtgc ccgaaggcgt
     7981 gagcgagatc gtcgcccact tcgacttcct gtcctcgcag ggcggcagcc agggccgggt
     8041 ggtgatgacc ccggaaatgc tcaacctgca gtggaacgcc aattcgctgt atccggccgg
     8101 catcgatgcg cgccagctgc aggcacaggc cagcgtgact ttgcccaagg gctggtcgtt
     8161 cgccaccgca ctggaaaccg cgcgccgcga cggtgacacc gtggtgttca agccgatttc
     8221 ctatgaccac ctggtggatt cgccgttgtt cgccggcgag cactaccagc gcatcgacct
     8281 cgacccgggc gcgaaggtgc cggtgcacct gaatgtgttc gccgacgatg ccaagtcgct
     8341 gaagccgacg gacgcacaga tcaagctcca ccgcgcgctg gtgcagcagg ccgacaagct
     8401 ctatggcgcg cgccactaca accactacga gttcctgctg gcgctgactg accgcctcgg
     8461 tggcatcggc ctggagcatc atcgctccag cgagaacagc gccgagccgg gttacttcac
     8521 cgagtgggac aagagcgcgt ggatgcgcga cctgctgccg cacgagtaca cccactcgtg
     8581 gaacggcaag taccgccgcg gtgccgacct ggccaccgcc agcttcaacg ttcccatggg
     8641 cgacagcctg ctgtgggtgt acgagggcca gacccagttc tggggccagg tattggccgc
     8701 gcgttccgga ttgtggtcgg tcgagcaggc gcgcgacatg ctggccaatg tggccgccac
     8761 ttatgaccgt ggccgcccgg gcctggcctg gcggcccttg caggacacca ccaacgaccc
     8821 gaccatcgcc cagcgtcgca cgttgccgta ccgcaactac cagatgagcg aggactacta
     8881 ttccggcggc cagatgttgt ggctggaagt ggaaggcaag ctgcgcgaac tgagcggcaa
     8941 ccgccgcagc ctggacgact tcgcgcgcgc cttcttcggt gttggcaatg gggactggga
     9001 cgtcaatccg tacaccttcg atgacgtggt cgcgaccttg aacggcatcg cgccgtacga
     9061 ctgggcgacg ttcctgcgcg gccgcctgga cggacatggg ccgctgaccg gcggcctggc
     9121 gctggccggt tggaagctgg tctaccgcga taccccgaac gccgcctaca aggcgcagga
     9181 aaagcgcgcc aagggcgcat tgctcgccta ctcgctcggg gcgaccgtgc tcgacagcgg
     9241 cacggtgagc gacgtgatct gggacagccc ggcgttcaac gcagggttgg cgcccggcat
     9301 gaaggtgatc gcggtcggcg gccgcgagta cagcagccaa cggctgaagg acgccgtggc
     9361 tgacgcggcc agagacaagg cgccgatcgt gctgctggtc aagcagttcg accgcatcga
     9421 tacgatgaac atcgactacc acggtggcct gcagtacccg gtgctggagc gcatcgccgg
     9481 cacgcctgat cgcctggccg agctgtggaa ggcgcgatga aagcgcgcgc ccgcgacggc
     9541 atgatcctgc tggtgacgat cctggccatc attggcgcgt acctgcacgg tgatggacgc
     9601 tggctgcact ggctggcgaa gccggccacg acgctgctga tcgccggcat cgcctggcag
     9661 gtacacaccc ccgcgcaacc gttctaccgg cgcgcggtgc tggccggcat gctgctgtcg
     9721 tgcgtgggcg acatcgcgct gatgctgccg atcgacgcgt tcgtgccggg gctgatcgcc
     9781 ttcctgctgg cccacctgtg ctacatcgcc gcgttccgcg atggactgcg cggcgggcgt
     9841 ggtctggtgg ctgccagcgt gctgctggga gcgtttgccg cgctcaatgt gctgggcctg
     9901 tggccgcacc tgccggcgcc gatgcgcatc ccggtgctgg cgtacgtggt ggtgctggcc
     9961 tcgatggcgg tgctggccct cgcacgcgca tgggtgcgtc ctcaggtggc cgcgccggaa
    10021 ccgtgcagcg cacgctgggc cgctgccggt gccgtgctgt tcgtcgccag cgattcactg
    10081 ctggcctggg accgcttcgc cggtggcctg ccgctggcca gcctgctggt gctgtccacc
    10141 tactacgccg cgcaatacgc catcgcccgc tcggtgaagt agcaaaaagg ggacggaggg
    10201 gattaagtcg tattcggcat cgtggcagaa acgacttaat cccctccgtc cccttttccg
    10261 gtgttgcgct cagcggaact gcagggtcag caggtagtag cggcccaatg gatcgtccag
    10321 cccgggcatc tgcccaccat tgccgaccag gtagttcacc ggttgtgtgt cgagcacgtt
    10381 gtgcacgtcc agcgcggcaa cgatgcgcgg gccaaggcgg cgtgccaggt gcaggttcca
    10441 gcgcagctgg cgggggttca tgcagtggtt ctgttcaacc tgatcctgcg ggcactcggc
    10501 accgggcagc caggcgcggg tgcggccgac ctggttgccg cgcagggcga tgtcccagtg
    10561 gctgttctgc cactgcacgt tcagcaccgc tgccatctcc ggcgtcacat ggccgcgcag
    10621 gtcgatcgcg ggttcgtggt cgcgctggcg gcgcagttcc tgctgtttca gtgcatccag
    10681 cgagaacagc cattggccgt tgctgccggt gtcgatgcgg tactcgccgc gcagcaccca
    10741 gttgcgcgag gtggtgcggc cgatgttgtc gaaggacagg cgcaggctgc gcagcctgcc
    10801 ttgttcgtcc agctgccagg tatcgcggtt ccagaccgca tcgttgggct gcagtgcgag
    10861 gatctcgttg cgcagctcga cgatgttgtg ggtcagcgac agcgagaacg catcattcgg
    10921 ggaccaggtc gcggccagtg aatggctgcg cgagctctcc gctttcagca tggtgttttc
    10981 ttccacgtct gcggtcaccc tgcagcgtcc atccgcggcg ctctgcgcac acggcggcag
    11041 cgcatccgaa gcgggcaggg tgagggtgcc gaactggccg ggcgggcgcc gttgctcgaa
    11101 caggctgggg gcacggtagc cgcgcccgct ggccagcagg aatgaccact gcggcgacgg
    11161 cgtccagcgc aggccggccc gtggcgagac cgcggtgtag tcaccgtcac ggtcccaacg
    11221 tgcggccagg tccatgcgaa gcgcaggcgc cagcggcagg ccgagttcgg cgtaggcgcc
    11281 accactctgc cgcgacagcc tgcgctgctg ctgcggcagt cccagcgcca ggtcaccctg
    11341 gctcagcagc gcatcggggt gcgaggtcca gcgctcatgg cgcaggtcga tgccggtggc
    11401 cagctgcgca ttgccccccg gcaacggcat gagttcgcgc tgcatgcccc accagccctg
    11461 ccattgttcg gtaaggccac ggttgcggat catcgggaac catgacgccg tttcgtcgct
    11521 gggcagcatg tcgaatcccg gcaggaaccg gagcgactgc gcggcctcga tcaacggggt
    11581 ggcccgcacg gtgcccggcg tggacaggct gatatcactg cgctgtgcgc tgagcccggc
    11641 atcccagctg cgccggccct ggtcgcggcc gatgccgaag gtgacgtcag catcggtggc
    11701 gcgaacgtgt gggcgcacgt tgccggcttc gcgcagcacg gtgttgaagg tgattccgta
    11761 cagggcgagg gaaaccgcag tggggccgag gtcgaagcgc tggcggttgt ggctggcgcg
    11821 ggcctcggca taggcgtagc gcccttcgcc acgttcatgc cgatagcgca ggtaggccga
    11881 cgcggtatcc gaagcgggct gcagcgagcg tgggcgcgcg ctgtcgaacc agcaggcacc
    11941 atcgcgccgc ttcaacggcc cttcgcagcg ccgtgcaggc cagtagcggc cagcgccgaa
    12001 ggcaccgatc aggtattgcg aggtttccgc atgccagtcg cggcggtcgc cggccaggtg
    12061 gtcgacacgg tgcaggtcga cgccggcgaa ccagcgatcg ccgttgccgc gcaggccgcc
    12121 ggtggccgcc tgcaggcgat actgcgcggc gtcgccccgg ctgctcaggc cggtctgcag
    12181 catggcttcc ggcccatcgg cctggtcgcg caggatgatg ttgaccacgc cggacatggc
    12241 gtcagcgccg tagatcgccg aggcaccgcc acgcaccagc tcgatgcgtt cgacgaagct
    12301 gagcggaatg ccgcccaggt cggtgagccc tccctgctcc agcgatacca tcgggtagcg
    12361 cggcaggcgc cggccattga ccaggaacag ggtggcgcgc ggccccatgc catcgaggct
    12421 ggtagtggct gcggcaccga ccggcaggta ctgcgagtca ccgctgcgcg cgctgctcat
    12481 cgccggcagg ccattcatgc cgggcaggtg ccgcagcagg tcgaacaggc tgccgtagcc
    12541 gctgcgcagg atgtcgtccc gatcaatcgt ggtgaccggc agcgtggtct gcaccgaggt
    12601 gcgtggcagg cggctgccgg tgacgtggat cggtgccagt tccacctgcg gcggcggccg
    12661 gggggcatcg tggcggggag ccaccacggc ctttggcgtg ggtgttgtgg caatcggggc
    12721 cgcaccgacg cggcgcacca cgaagccacc cgaaggcgtg cgcaggatcg tcaccggcat
    12781 gccggcaacc agttgtttca gggcggtggc gggatcggtc cgggtgttcg cgccgtcggt
    12841 atgcagtcct gccagctcac gggcgtcgaa cagcagcgca atgccgctct gccgggccca
    12901 ctgctgcagc gccgacggca atgggccggc atcgatgcgg taggcatgcg tggccgccga
    12961 ttcgctggca gtggccgcgg gcaatgcagt ggccaacagc accaggcaca gcagggggcg
    13021 gagcagcccc cactgcagcg cgcccggtcc tgccatcact gcaggccccc tcagtacgtg
    13081 cggcgcagtt ccagcgcgcc atccgggcgc gtctggccag cgacggacca gcccagttcc
    13141 agtgcggaca gcaactcctg tgcgtcgcct gcgcggaacg tgccactgac cgccaggttg
    13201 ctgatctccg gatcggcaat caccagcggt gtgcggccat agcggttcat ccgttcgacc
    13261 acgatcgaca gcggcgtggc gtcgaatacc agctgtccct gcagccagcc ctcggcggcc
    13321 gccgtggacg acagcgccgg gcccggctgg atgcgcccgg aaggcagcac ctgcagctgc
    13381 tggcccggtg cgagggtgtg ctgggctgcg ccgttgctca cttccaccgc gccttccagc
    13441 agcgcgactt ccaccaggcc atcgcgcagg cgttcaacct ggaaggtcgt gccgatatcg
    13501 cggatcgtgc tggtgccggc gcgcagctgc agtgccttgt tcgacggcgc gacctgcagc
    13561 tgcaggcgcc cgcgttcaag gtccagctcg cgatggcgcc agccgaaacg ggcgtgcagc
    13621 gtggtgcccg cgtcgagcgt ggccacgctg ccgtcggcca gggtcagctg ctgtgtttca
    13681 tggctgtcat tggcatagcg ctgcggcgtg gggttgccgt ccacggccag catccagccc
    13741 acgccgatgg ccaggcagat gccggcggcg gccgcgaatg ccggcaacca gcggcggcgc
    13801 ggcggtcgcg ccgcacgggc cgcagcggta cgcagccaag ggtctgccgc caggccctgg
    13861 ccctgctgga acaggttctc ggcctgcacc cacgccttta catgggccgg gttctcggcc
    13921 agccagtcct cgaacgtttt gcgttcggcc ggcgtgcagt ccggggcttc cagccgcgcc
    13981 acccaggcgc tggcgcgttc aaacagcgag gcgtcttccg tgtgccggta atggttcatt
    14041 ccacatccct gtcgttgtgc agcggatccg gtcccaactc ctggcgcagg ccctgcaggg
    14101 cacgggcgat atgtttttcc acggtcttgg cagtaattcc acagtgccgc gcgatctgcg
    14161 tatagctcat gccggtgatc cggttgagca ggtacacctc gcgcgcgcgc tcgggcagtt
    14221 tgaaaagggc ctgccgcagc agggacagca tctgcccgga ctcggcctgg cgcaatggat
    14281 cgggcgactg gctggtgggc tggtcgctgc catcatgctc ggccaacggc aggtgcggtc
    14341 gcgactgcgc agagcggccg cgatcggcca ggcggttgcg ggcgatacga tacagcagca
    14401 ggcgcagctc gtcggcgcca tgcgcgcgat agcggatcag ccgctccatg cagtcctgcg
    14461 cgatgtcctc tgcatcctcc ggcccgacgc cccgcgtgcg caggaacgca cacaacggtg
    14521 cgcgttcttc gcgtacgaac gcgatgaagg catccgctgg caccggcggc tccggcgcgt
    14581 ggtggatcag gggggacgga gcggacaggg ctggcctcgg cagacattgg cggatgcgtc
    14641 atcgagtttt acgcgacgat gaccggatgg ggaagagtgt gcggcacccc attctcattg
    14701 tgaatgcatt catcattgcg cggcgggtcg gctgggggag ttcgcgccgc tctgacgttt
    14761 gaccccttac ccgcgtgttg cgggtggaga gagaacgtat gaagcattcg aagttgagcc
    14821 tggccctggc cgggctgatc ggcgtcggcg ccctcgcggc tgctgatgac gtcatggcaa
    14881 tgagttatca cctgcagggc gatcgcatct tcctcagtgg cggggtgacc tacgccgacg
    14941 tggtgtcgtt gccggcattg ctggccaagg cacaggccga gggccggccg atccgcgaag
    15001 tggtgctgcg cacctccaac ggcggcgcgc tgatcgccgg cgagtggctg cagggcgtga
    15061 tccgcaccgc cggcctgaac accatcgtgt ccggccactg catctcgtcg tgctcgatca
    15121 tgcagtccgg tggcgtccag cgctatctgg ccggcgacct gccgatcgtc gattcggtgc
    15181 agatccacgc ggccagcagc ggcggcaagg tgatctatac gccgtcgccg cgcatgaccc
    15241 agatctacac cggcaactac ggcggcggca tggatgcggg cctgctgcac aaggccatgt
    15301 acgaggtcgt gcagcccaat ggcctgctgg tgttccgcga cccggcgcgc accaccggcg
    15361 cctcggtcac cttcgacccg gatggcagcg gcagcaagct ggagtcgttc ccgggccagg
    15421 acatccatag caacaacatc atcaccgcga acggctatcg cgatcctggc gacacgttga
    15481 acgtgagcgc gaacgtgagc ggcgacatca accccggtta cctgcgcacc gggcgccagc
    15541 tgcagacttt cgtcgacgac gatttcgcgc gctggaacac caactggcag tccagctaca
    15601 tcaacctggc gcagagcatc tacaacgctt caagccgtgg cccgcagggc atcggcccgg
    15661 attcggtgca ggactacctc aacgatccgg gcatccaggc gctgctgctg tccaagctgc
    15721 gcctggccga cctggacgtg tccacgctcg acaacgccat gggcgtgatc cgcgtgagca
    15781 acggtgccac ctggcgcacc gccgcaacca ccggcgccga cttcatgctg gtcgacaacg
    15841 gcaccatcgc actggaaggc ggcgcgctgc gggcgtcgga agtgcgcgtg ctgggcgcgg
    15901 gcatgctggt tggtcatggc gacgtggccg gcaccgcgat ggatcttgat gcactgggca
    15961 gcggttccgg cccctcctgg cgcgaggacg gcttcaaccg cctgcgcgtg tttggcacgc
    16021 tgatgccgcg cggcggtgac ctggtcaccc acggctacgt caacatcatg ccgggcggca
    16081 agctgttgtt cgacgtcacc gagaacggcg gcgccgccac cggccgactg cgcgtgggca
    16141 cgttcttcga tgacgaaccg accgatggcg cgctggtgat ctccaagggc gccttcctcg
    16201 aattgaatgt ggcgcagggc tactacggcc aggacttccg ccgtgacctg gtaaagggcc
    16261 cgatctatca gggcggcttc gaggatgtcg tgcgcctggg cgacaccggc tacagcgcca
    16321 gcatcaccgc gggcgatgtg ttccgcccgc gccacaactc gctgctgagc ttcaacgtca
    16381 agcagaccgc cgacggcctg tggctgacgg caaaccccgg cttcgatcag ctgggcctgt
    16441 tcaccaacgc tacctccggc gacgggctgg gccgcgcgct ggcgaccgcc tccgcccgcc
    16501 aggacggcaa cctgaaatca ctgctgggcg cgctgcagtt cgccgaccgt gatgtgatcg
    16561 cgcaacaggc cggtgccctg cgcggtgatg cgcacgccag cctgcggctg gccgacaacg
    16621 cgctggtcgg cagcatcggc aatgtggtgc agcagcacca ggccgcgatg cgcagtggtg
    16681 gtgatgccga tggcctggcc tcgcaggccg cgcagtcggt gtcggcacag ccgggcatgc
    16741 gccacggcag cctgttcaac cagctggcga tgcatctggt cgagccggcg tccggcagtg
    16801 ctgcgggcag cggtgatgct ggccgaaacc gtggcatatg ggcgcgcggc ttcgccagcc
    16861 atggccgcat cgatgcggag ggcggcgtgg ccggcctcag ccacaacatc ggtggcatcg
    16921 tggtcggtgc cgatacccgc gtggccgatg accgcgtcac cctcggcgtc agcgtggcgg
    16981 ccgccgacat gtcgaccaag ggccgcgacg gctccgactt cagcggtgac gtgcgtgcgc
    17041 tggatgtggg cggctacctg gatgcgacct attcgcgcgg ctacctgtcg gcggcggtgc
    17101 gctacaccga cctgcgccac gacacccgtc gcagcatcag cggcattgat ggcctgcagc
    17161 agccgctgcg cgccaagtac aacaacgatg caatctccgc acgggtcgag cacgcgttct
    17221 cgttcaccac cggcaatggg ctggtgatcc agccgttgct gccggtggtg gattacgcgc
    17281 gcacctcggc cacgcgcttc aatgaagggc agggcgcggg cgcgctggtt ggccgcagcg
    17341 gcagcctgga aagcatccgc gtcggtgccg gcctgcagct gttcaagacc ttcgaaggca
    17401 acaacggcga gcgcatcacc ccgcgcgccc gcgtggtctg gcagaaggaa ctgggcgatg
    17461 cgcaggcccg ctacagcacc ggcttcgccg ccgccccgga cctggtgttc ggcgccagca
    17521 gccaggccgt gggtgagcag gtgctggcct ggaacctggg cgtgaccagc cgcgccagcg
    17581 agcgcctgtc gatcatggcc gactacgtgg gcgagcgccg cgacgggcag atccagaacg
    17641 gcgtgatgct tggcttgggc taccggttct aaggtgagca cggcaccggc gatgcctgca
    17701 tcgccggtgc catccccata gacgcgtggc tgcggtatgg tcggcagggc atcccaccca
    17761 ggtccttcca tgcagatcgc cgtcttcagc gcccgccctt acgaccgtcg cttcctggac
    17821 gaagccaacc agcgtgatgc ggacgggcag ggctacgcgt tcgtctactt cgatgccgcg
    17881 ctggatgtgc ataccgcagc gctggcgcag gactgcgccg ccgtctgcgt gttcgtcaat
    17941 gaccggcttg atgcgccggt actgcacgcg ctgcatgcct tcggtgtgcg tgcggtgctg
    18001 ctgcgctgcg cgggcttcaa caatgtggat cttgctgcgg cgaaggcact gggcctgttc
    18061 gtcgcgcggg tgccggccta ctcgcccgaa gccgtggccg agcatgcgct ggcgctggtg
    18121 atgaccctca accggcagac ccaccgcgcc tacaaccggg tgcgcgaagg caacttcatg
    18181 ctcgatggcc tgcttggccg caccctgcat ggccgcaccg tcggcatcgt cggtaccggc
    18241 aagatcggcc tggccactgc gcgcatcttc aagggcatgg gctgtaccgt gctggggcac
    18301 gacccgtatc cgtcgccggc ctttgccggg gtgggagaca tggtggcgtt ggacgaactg
    18361 ctggcgcgtg ccgacatcgt ctcgctgcat tgcccgctga cacccgacac ccagcacctg
    18421 atcaacgacg cctcgctggc gcggatgaag cccggcgcga tgctggtcaa cacctcgcgc
    18481 ggcgcactgg tggacaccca cgcggtgatc cgcgcgctga agtcgcgccg gctcggccat
    18541 ctggccatcg acgtctacga acaggaaagc gcgctgttct tccaggacct gtccggcgag
    18601 atcatcgacg acgaggcctt ccagcgcctt atgaccttcc ccaacgtgct ggtgaccggc
    18661 caccagggct tcttcaccgt ggaggcgctg caggagatct cggcgatcac gctggggaac
    18721 ctggccgatt tcgccgccgg gcggccctgc accaaccggg tggaagcggg ctgagccggg
    18781 tggattgacc gccggggcgc cctgcccgta aaatcgcggg ctccgccgga atagctcagt
    18841 tggtagagcg gcgcattcgt aatgcgtagg tcgcaggttc gactcctgtt tccggcacca
    18901 gttgtaatga aaagccccgg ccttggccgg ggctttttgt ttttgccatg tgcgggcccc
    18961 tgttggaggc acggcgtggg cagcgttcca gggaaaatgc gggtaatgga ttgccgctat
    19021 tgaccgtttg gatggcattg gttaataaag ccacttcaat cgcctgtggt cgctcctggg
    19081 gaggaaggcg atctgttccg gtatgagtcg agtggcgccc ttggtcgggt gcccgactct
    19141 gtcaggacgc gtgcgggaaa agccggtcca gggaggactc agatgttgtc acgcgttgcc
    19201 caccgcctgc gcctgcgttg cgcggccaag tcccttctgc tgctgtcgat gctcgcttcc
    19261 ggactgcttg cgccgttggc ggcgcaggca cagatcgtcc cgacctggcg cgaggagtac
    19321 ggcaagcgcc tgaagtatgg cgatctggtc gagccgctga agggagagat cttcggcgag
    19381 aagatcaatc tttacgacgg ttcggtcagc ttcagcgcga ccgacatttc gctacccggc
    19441 tccaatggac tggatgtctc gatcagccgc agctacggcg atattggtgg cagccgcggc
    19501 gacaaagagt tcggcaactg gacgctggat gtgccttcac tttccggcat ttatggcgat
    19561 cagccagaga cggtgtcaga gggctactgg tcaccgcgcg cgcgctgttc gacggtagct
    19621 gcgccgccga cgctgaaagt ctggaattat cggcacacgc agacgatcaa cttcgacccg
    19681 cacacgtatt gggatggggt gcgtcttaca ctgcctggtg gcaacggtga aaccgttctg
    19741 gccgggagca acgacgcgaa acagccccgg ccgcaggtgg ggcagcccac gccttggaac
    19801 accaagggag gttggttctt ctcctgcctc gcttcgctca agagcggcca gccgggtgaa
    19861 ggattcctcg gccactcgcc tgatggcaac aagtactact tcgactggat ggtggcccgc
    19921 gacgaagact ctgcggtgct gcagccttat gacaccgtca cccatgcgac gctgaagcgc
    19981 aggaaggtct tcctctaccc gtcccaggtg gtcgatcgtt tcggcaactg ggtccgttat
    20041 gagtggaatg gtggacagct gcagcgcatc agtgccagtg acgggcgcag catcagcctg
    20101 gcgtacgatg cgcaggggcg tgtggttagc gcatcggcgg gtggcaggac ctggacctat
    20161 ggctacaagc ctcagggtga cctgcaaacc gtggtgctac cggatggaac gtactggagc
    20221 tacaacctgc cgccggtcgg cgtgaccaag aagtacccgg attactttgg tcaaccggag
    20281 agcgcgtaca tggagactcc cgccatgtgc gcgaaaacca acaagatcgt gcagaccgag
    20341 gtggtgatca gcatcaagca tccctcgggt gttgtgggag cgttcgcgtt ccggccgttc
    20401 cgccatggcc gcaagaacgt tcccttcaac tgccagactt ctggcgatga ccagttgctc
    20461 gccgatggtt ggaatctcac ccccatctat cgagacgcga tgtcgctggt cgccaggacc
    20521 atcgagggcc ctggcgtgcc gagggcgagt tggacctatc agtacgccaa cctggggtgg
    20581 aagtacaacc gcgaggtgca tcagcaggga tggccgatgg tgccagtggg ccagtccgag
    20641 ccgaagatca cgatcgagac tcagccggac ggtgtggtca agacgtatga gttcggcaag
    20701 gaggtcgcct acaacgacgg cctgctgctg gcgacctcca ccagctccgg cggcaccgtt
    20761 gtccgcaccg atcgcagcgt ctactacccc gatgcggagc ttgccactgc gccattccca
    20821 cgcgccgcag gacgcaacct gaagtacggt gccaccgagc tgggcgaaca cctgaaccgg
    20881 ccggtccagt ccacgctgat tacccaggat ggggtgcagt tcacccgaac ggtccaggcg
    20941 ttcgatccct ccgtgcgcga gatcgaggtt gctgagtcca actcgaacgg ccagggccgg
    21001 agcacctcga cccagtacta cgacaacccg cagctatggg tgcggggcca ggtggccaga
    21061 agcctggtga acggcatcga gcaatcgcgc accgagttcg atgcagccac cgcgcaacct
    21121 gtacgtgcct acatcttcgg tcgactggcg caggaggtaa cctacgccgc cgacggcaac
    21181 gtagcgtcgg tcaaggatgg caatggcaac acgaccaggc tggagcggtg gaagctgggt
    21241 atcccacaat ggataatcca tgccgacagc acggtgaccc gggccgctgt caacgattct
    21301 ggctggatta ctgccgtcgc cgacgagaat gactacctca cccagtacga atatgacggg
    21361 atggggcggc tgacacgcgt cgagtatccc agcgatgaca gcgtcgcctg gaatgaaaag
    21421 agacaggcgc tcgagtgggt gccggtcaat gagtacggta ttcctccggg tcattggcgg
    21481 cagacaacgg ccacgggcaa cgcacgcaag atcacctact tcgatgcgtt gctgcggccg
    21541 atgctgaccc aggagttcga tgcgggcaat caagccgcca cgcagcgcct gcagttgttt
    21601 gcctacgatg cccaggggcg gcagacattc tcgtcgtatc cggtttcaga cttcccggtt
    21661 ccctggaagg ggacctggaa tgagtacgac gcgctggggc gggtgacctc aagttcgcag
    21721 gacagcgagc atggtctgct gaccaccctc accgagtatc tgccaggtgg gcagatgcgc
    21781 gtgaccaacc ccagggggca ggtgacgcag acccggttcc agatgttcga tgcgccgtcc
    21841 tatgagcacc cggtgtctat ccagatgccg gagggggcgg tgatgaatat cgcccgggat
    21901 gtcttcaaca agccattgat catcacccgc ggcaatgccg atggcagcca gacggtggcc
    21961 cgccgctatg tctattcgcc cagccagcag ctgtgcaaga cgatcgagcc ggaaaccggc
    22021 agtaccctga tggattacga cggcgccggc aatctgatct ggtcggcatc cggggtcgat
    22081 tctccatcgc cactgacctg caacaccgaa gccatcagca gcagcggtcg cgccgtctat
    22141 cgcgagtatg acgcgcggaa tcggccaatc tatctgcggt tccccgacgg aaacggcaat
    22201 acgagttgga cgtatacgcc ggatgggctc ccgtcgcgat tgttggtccg gaacgattct
    22261 ggcgccacga cggcgtccaa tcactacttc tacaacaagc gccgtctgtt gacggtggag
    22321 agggtgtctc agcccgattg gaacgattgg cccatcatct acagctacaa cgccaatggc
    22381 cacccttccg gacagacctg gccgagcggg ctgacggtcg actacgcgcc ggatgcgctg
    22441 ggccaggcta cacgggtcgg gaacttcgct accgacgttc gctactacgc gaatggcggc
    22501 atcaagcaat tcacctatgg caacggcatc gtgcacacga tgcagcagaa cgagcgtcaa
    22561 ttgccttcgc ggaccaccga ttcgggtgtt ctcgactttg atacgcgatt cgatcggaat
    22621 ggaaatgtca gcgacatcta tgacctggca ctgggggcgt tctacaaccg gcacatgctc
    22681 tatgacggtc tggatcgact gatcgcggca ggctccaaca actttggcgg cgattcctgg
    22741 caccggttca gctatgacgc gctggacaac ctgaccagct ggatgctgcc gggtgtcaaa
    22801 gaccatcgct actggtacga cgcgcacaac cgcctgacca atgtgcggga tggtgcgggc
    22861 aatacgctta tcggcctgag ctatgacgtg cagggcaacc tgaagctgaa gaatggcctc
    22921 aaccacagct tcgacttcgg caatcgactg cgcgaggtga ccggtaaaga gacctatcgc
    22981 tacgacgcgc tggggcgccg catccttgcc tccgccccag gactgggagt ggtgctttcg
    23041 cagtacgcac aggacggtcg gctggtattc cagagtgatg gccgcaaggg gctggggcgc
    23101 gagtacgtcc atctggccgg cagcctgatc gctcgccggg actacgcagg cgcggacgcc
    23161 aagatcacct acctgcacac cgatgcgctg ggaagcccgg ttgccagtac ggatgcttcc
    23221 ggcaacgtga tcgagcgtac tcattacgag ccgtatggcg cgccgatcgg caaggtggtg
    23281 gatggccctg gctacaccgg acatgtgatg gacggtgaga ccgggctggt gcagatgcag
    23341 cagcggtaca tggatccgct gctgggtgtg tttttgtcgg tggacccggt gacggcgtat
    23401 gagcagcctg tgaggcagtt caatcggtac cggtatgcga acgggaatcc atatcgtttc
    23461 accgacccgg acggacgcct gtcacgcggt acgggctgga ccgacagaca atggaagaag
    23521 ttcgaccgag cccaacagag cgccgcaggt agtttggaga aggcggctgg aaagatcacc
    23581 cgcgccatgg gcgagggagg caaatcgctt cagcgagccg agaaggcatt tgagcgcaat
    23641 tttggtgctg gctcagcgac ggcagagaac atgtccaaga cagcctcgga tatgagttcc
    23701 atggctgcgg cattgcggga taccagcgca ggagccattc cggctaatgg catgacgggc
    23761 gcacaaatca ccgcaactta tgggggtggt ggagataccc tagcaggggt ccctactgcc
    23821 ggaccgaaaa tggtcatcat caacacgacg catgcgggtt ttaatgattc ctccagattg
    23881 gcttgggggg ctggccatga agccgggcat gccgtgctgg gctataagga ccagtttttc
    23941 aatggtgaca cggcatacaa attcggaacc cctcagcagc aaagtatctt cggggcgttg
    24001 cccagcgagc agcgtcttat caatccagac cacatcatgg atcaggctcg atgaaaaaat
    24061 tactggcagc taccttgttg tgcacgttga taccggcctg cgcaactcag cttcggcgtg
    24121 cggactctaa ggatttcagt gtttctgtga ctgaccgcgc tacggaaaag cgctacgatg
    24181 tagttttggc ctctgccgct gacgagactc tttgcctctc aaaggaaagc tggcctatcg
    24241 aaaatgggac gtttccgacg gggtacgaag gagccatttt gaccacgacc gacggtcctc
    24301 tgcatccgaa agcagccatg actgcgtact gccccggagg atgcggcgag gttcacttgg
    24361 agccaggtca agccttgcgg gcgagcattg cctatgcagc atttggcgat gcggaagtca
    24421 tcgcagctga cgcagctcgc tcgctatcat tttctgttta tccctactac tgcgaaaggt
    24481 agttttactc ctcaatgccg ttgagataaa caacatctgt ggcaaagtca tcgtaatccg
    24541 tgcgctcggt tgtaaggcgc atgaagcgcc gctcaatgac tacgctagta cgccgcaccc
    24601 ttgcctccgc cccagggctg ggagtggtgc tttcgcagta cgcacaggac ggtcggctgg
    24661 tattccagag tgatggccgc aagggcctgg ggcgcgagta cgtccatctg gccgacagcc
    24721 tgatcgctcg ccgggactac gcaggcgcgg acgcaaagat cacctacctt cacaccgatg
    24781 cgctgggaag cccggttgcc agtacggatg cttccggcaa cgtgatcgag cgtactcatt
    24841 acgagccgta tggcgcgccc atcggcaagg tggtggatgg ccctgggtac accgggcatg
    24901 tgatggatgg tgagaccggg ctgagctaca tgcagcagcg gtatatggat ccgcagctgg
    24961 gtgtgttctt gtcggtggac ccggtgacgg cgtatgagca gccggttggg cagttcaatc
    25021 ggtatcggta tgcgaacggg aatccataca gattcacgga tcctgatggg cgggagagtg
    25081 gcgcagcctt caaagtagtc aacgacgcta cgaatgggca gccgattact ccgccgccca
    25141 gaaatccaag cgacagactt gggccggcaa ttggtgctgc actgactgca gttctggccg
    25201 ctccagtgct ggcagaggta ggcctggtgg caatggcaaa tccaggagca gttgccacgg
    25261 cagccgaaat tggtgcggga gctgctgggg ttacgggtac ctctggcgcg gtggctggaa
    25321 agatcactgg ttacacgaag catgggttga atcaggcaat ctcccgcgat gggggcagag
    25381 gtgtctctgc aaaggccata ctatcggcgg tcaaagaacc tgcgaaggtc gccgagcagg
    25441 ccggtggcaa gattgcctat accgggaagg atgcgaaggt ggtcctgaat ggagaaggga
    25501 aagtcataac taccattcca agaaacagcg atgggttgag agacccgaag gtgaagtgaa
    25561 atgacaaggt ctatctcctc ccgtctgcat tctctgttga ttgaaatcgc agcgaagcac
    25621 agctttcaat tgcctgaaga aggctttatg aacctggttg aaagtgatcg cgagctgctg
    25681 gtcgatgcct tgctgcggga gctgttggag accggcttga gagctgacga tgagcctaat
    25741 caacgaggcc tggagatcga agagatcatt gatttcgtcg catccatccc ggactcgcct
    25801 gatgcgccga gcgggtgaat agttgctgat gtcaaattgc aggcggcgag tcgcagattc
    25861 gatttctact tcgggtactc atcgcagtgg atgccccgat tctgatcggg gcttttcttt
    25921 tcgtgcgtcg ctggcgcggg gggcagagtc gtcggatgga agggtgattc gcacaagtag
    25981 tgccagccca tggcttgtac cgccaaagcc aaccgtctgt cgctttttgc acattcaatc
    26041 gggcgattac gtcagatcct tccagtccgc ttgctgtcca tccattcggc cagtccgatt
    26101 catacaacta ttggtaagcg gaaaaagtca cgggcctcaa tgatcttcaa gctatttgcg
    26161 gcgccgcatg tcgtcgccgc ccaagcatca gcgcactcgc gtcttctcat gtcgccctcg
    26221 ccatctactg cgcatgcaac aattcgtacc gctcctttcg atgcatccga atctttcgga
    26281 tttttctcat tgaatcgaaa gtgcaggcgt atacaccatg gcgcgccacc gaaaaagggt
    26341 ggccgggcat ccaaacccgc gcatagctgt aaacgcttgc cagccggcac cgctctgaaa
    26401 cggtgccggc tggcaatccg tcggcctata tggcgggcgg tgcgtggggg tcttcggacc
    26461 cgccggttta gctatgcccg gtttggaacc cgcaccgtcc gccaccccgc ttccgcgcgg
    26521 tggcagtgtt aagtacagcc acggaagccg acgccatgac cactcgcaag attccgccat
    26581 tccccgtcga tgagcccacc aacgacgacg acaacccgtc ctttgacctc agcaccttcc
    26641 agggctgcct caagcgcatc cgcgatggcg aaggctccga tggcatgctg tggccggaag
    26701 agaacctgtc agacggccgc cgccagtcct tggccaggat cgaccgcgcg gcggtgggca
    26761 tgctgacggc ggtggagatg ctgcatgcgg ccagtcgctg cgaatccatg gccacgcccg
    26821 accggcatct ggatgagggc gtcgtcgagg ggttgttctt cgcatgccgc gaactggctg
    26881 aactggtgtg cagggaagtc cggccgtcct gagcttgcgc acgtggctga acacgttcag
    26941 taggctttgc cggtccggtg gctttggcgt ggccgggccc gatgctacgc tgcgtgcccg
    27001 tgcggctgga cagcccgcgc gcacgcggtg cgacaacgtg tcgcagtcag atcggcgcct
    27061 ttcctgcgct cgatcattgt caatgccttt cttaaatggt gggtgacggc ctaaaattgt
    27121 agggctgact cgaccccacc tccctgcctg tccccggacc ggtgggaccg gctttggccg
    27181 gaacaggcag gacggggaac ggcattccct cgcaattgga tcgaccgatg attccgttga
    27241 aaacccttgg gcgctggttg cgcccgggcc tgctgctgtc gttgctggtg atgctcaccg
    27301 gctgcgatgc cgtggccatc ctcagtccga agggccagat cggccaggat gagaagaccc
    27361 tgctgatcac ggccaccgtg ctcatgctgc tggtcgtcat cccggtcatc atcatgaccc
    27421 tgaccttcgc gtggaagtat cgcgcctcca acaccaaggc ccgttacgag ccgaagtggt
    27481 cccactcgac ggcgatcgag gtggtggtgt ggtccattcc gtgcatgatc gtgctggtgc
    27541 tggcggtcct gacctggcgt tcgtcgcacg cgcttgaccc gtacaagccg ctggaatcgg
    27601 acgtcaagcc ggtcaccatc gaggcgatct cgctggactg gaagtggctg ttcatctatc
    27661 cggaagagaa ggtggcggtc gtcaacgaaa tcaagttccc ggtcaacacg ccgctgaact
    27721 tcaagatcac gtccgattcg gtgatgaatg ccttcttcat cccgcacctg ggcagcatga
    27781 tctactcgat ggccgcgatg gagaccaagc tccatctgat tgccaacgag accggtgaat
    27841 tcccgggcat gtcctcgcac tacagcggcg cgggcttcgc caagatgcac ttcaccgcct
    27901 actcggtcac cgatgccgaa taccgccagt ggctggacca ggtccgtgcc ggcgagcaga
    27961 ccctggacaa ggcctcgttc aaggccctgg gtgaagcacg caacgccgag tggtacccgg
    28021 tcacctactt cggcaagacc gaagaaggcc tgttcaactg ggtcatcgcc aagcacatgg
    28081 gcgacaacaa gcactacggc atgaagcacg aacacgccgg tgccgccgct gccgatgccg
    28141 ccagccatga agcgcacgag ggccacgccc ccagtgacgc gcatgattcc aaggaatcgg
    28201 gtgaaaacct ggatgccaac gaacacgaac acgcaggcca tgccggccac gcgggttcgg
    28261 gagaatgaac atgttgggaa aactctctat tgagtcgatc ccccacgatc cgatcgtgct
    28321 gaccaccctg gtcggtgcgg tgctgggtgg cctgggcgtc atggccctga tcaccaagtt
    28381 caagctgtgg ggctatctgt ggaaggagtg gttcacctcg gtggaccaca agaagatcgg
    28441 cgtgatgtac ctcatcgtcg ccttcgtcat gctgctgcgc ggtttctccg acgccatcat
    28501 gatgcgtacc cagcaggcgc tcgccgtcgg cgggtccgag ggttacctgc cgccgcacca
    28561 ctacgaccag atcttcaccg cccacggcgt gatcatgatc ttcttcgtgg cgatgccgct
    28621 gatcaccggc ctgatgaacc tggccgtgcc gctgcagatc ggtgcgcgcg acgtcgcgtt
    28681 cccgttcgtc aactcgctca gcttctggct gttcgtgtcc ggcgcggtgc tgatcatgct
    28741 gtcgctgtgg atcggtgaat tcgccgccac cggctggctg gcgttcccgc cgttgtcggg
    28801 catcgagtac agtccaagcg tcggtatgga ctactacatc tggggtctac aggtcgcagg
    28861 cctgggtacc acgctgagcg gtatcaactt cttcatcacc atcttgaaga tgcgtacccc
    28921 cagcatgaag ctgatgcaga tgccggtgtt cacctggacc gccctggtga ccaacgtgct
    28981 gatcgtcgct gccttcccgg tgctgaccat cactctggtg ctgctgaccc tggaccgtta
    29041 cctgggtacg cacttcttca ccaatgacgg tggcggcaac gccatgctgt acatcaacct
    29101 gatctggatc tggggccacc cggaggtgta catcctggtc ctgccggcgt tcggtgtgtt
    29161 ctccgaagtc atcgcgacct tctcgcgcaa ggcgctgttc ggctacaagg gcatggtcta
    29221 cgccaccgcc tgcatcggcg tgctgtcgtt catcgtgtgg ctgcaccact tcttcaccat
    29281 gggctcgggt gccaacgtca atgccttctt cggcatcacg acgatgatca tctcgatccc
    29341 gaccggcgtg aagatcttca actggctgtt caccatgttc cgcggtcgcg tgcagttcac
    29401 cacgcccgtg ctgtggacca tcggcttcat ggtcaccttc accatcggcg gcatgaccgg
    29461 cgtgatgctg gcgatcccgg ccatcgactt cgtgctgcac aacagcctgt tcctgatcgc
    29521 ccacttccac aacgtcatca ttggcggcgt ggtgttcggc atgttcgccg gcatcaccta
    29581 ctggtggccg aagatgttcg gcttccgcct caatgagttc tggggcaagt gcgcgttctg
    29641 gtgctggttc atcggcttct acgtgacctt catgccgatg tacgtgctgg gcttcatggg
    29701 catgacccgt cgcctgcaga gcactgtcaa cccggcctac gagccgctgc tgctggtggc
    29761 cgctgcaggt gccttcatcg tcggcgccgg catcctgtgc cagatcatcc aggtggccgt
    29821 gtcgatccgc gaccgcaaga agactgccga cctgaccggc gacccgtggg atgcccgtac
    29881 gctggagtgg gaaacctctt cgccgccggc cttctacaac ttcggcacgc tgccggaagt
    29941 caccgaactg gacgatttct gggagcgcaa gcagcgcggt gaagcctggc cgaagccggc
    30001 caagtacacc gacatccaca tgccgcgcaa caccggcacg ggcgtggtca tcggtgcctt
    30061 cagcctggtg ttcggcttcg cgatgatctg gcacatctgg tggctggcca tcgtcggctt
    30121 cgtcggcatg atcgccacgt tcatctaccg caccttcgac caggacgtgg actactgggt
    30181 cccggccgcc gaggtggaac gcatcgagaa cgaacaccgc aagcacctgg aaaaccaggg
    30241 cctggtgaag tcggagctga aggcatgagc accaatacct cgaccctgag ccacgggcac
    30301 gccgcgcatg cggcggccca tggccatgac gaccacgagc accacgacac cggcggcaac
    30361 accgtcttcg gtttctgggt gtacctgatg agcgactgcc tcatcttcgc ctcgctgttt
    30421 gccacctacg tggtgctgtc cggcggtacc gatggcggcc ccggcgcgaa ggacctgttc
    30481 gagctgccgt tcgtggcgtg ggaaaccgcg ctgctgctga cctcgtcgct gaccttcggc
    30541 ctgggcatga tcgccatgca ccgcaagcag atgggccaga tgtacctgtg gctggccatc
    30601 acctggctgc tgggcttcgg cttcatgtgc atggaagtgt gggaattcca gcacctgatc
    30661 caccagggct acggtccgga ccgcagtgcc ttcctgtcgg cgttcttcgc cctggttggc
    30721 acccacggcc tgcacgtcag cgccggcctg ctgtggctgc tggtgatgtt cgtgcagctg
    30781 aagaagtacg gcctgacccc gaccaacaag acccgcatgg cgtgcctgag cctgttctgg
    30841 cacttcctgg acctgatctg gatcggcgtg ttctccgtcg tctacctcaa tggagcgctg
    30901 taatggcaca tgacaaccat gcacacgacc acggcaccgg cggcgaaagc catggcaccg
    30961 tgaagtcgta cctgatcggc ttcgtgctgg cggtggtgct gaccgtcatc ccgttctgga
    31021 tggtgatgtc gggtgatttc tcgcgcaccg tcaacggtgt ggtcatcgcg atcaccgcgg
    31081 tactgcagat gctggtccac ctggtgttct tcctgcacct ggaccgctct tcggaaagcc
    31141 gctggaacgt caacgctgcg gccttcaccg tggtggtgat cggcatcatc gtggtcggca
    31201 ccctgtgggt catgcacaac atgaacgtgc acatgatgca ctgacgtcct cgcgacgttg
    31261 ccacgcagaa aggccgcccc cgggcggcct tttt
//
LOCUS       DAOKIP010000026        31165 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.026,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000026 DAOKIP010000000
VERSION     DAOKIP010000026.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 31165)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 31165)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..31165
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.026"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(34..522)
                     /gene="bfr"
                     /locus_tag="QEL58_001080"
     CDS             complement(34..522)
                     /gene="bfr"
                     /locus_tag="QEL58_001080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012479622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacterioferritin"
                     /protein_id="HDS1675578.1"
                     /translation="MKGNPDVIACLKELLRGELAARDQYFIHSRRYEDQGLFALYERL
                     NHEMEEETQHADALLRRILFLGGDPDMRPHATEPGKTVEEMLQKDLDTEYAVRNNLAA
                     GMKLCEEKGDYVSRDMLLAQLKDTEEDHAWWLEQQLGLIKRIGLELYQLSKIDGNGAP
                     AH"
     gene            646..2973
                     /locus_tag="QEL58_001081"
     CDS             646..2973
                     /locus_tag="QEL58_001081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012479621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin acylase family protein"
                     /protein_id="HDS1675579.1"
                     /translation="MRRTWRWVLGVLIAIVLATVLVLWLLLRGSLADLDGEHALPGLA
                     KPVTVERDALGVVTITAGSQADAMRALGRVHAQERYFEMDLMRRSAAGELSALFGPKA
                     VDADKRMRVHRLRARTEANMQAALGSNSEAVGAYVAGVNEGLAGLPVRPWAYLLLRQA
                     PQPWRASDSVLTGLAMYADLQDPGNQTELALSRIRAVVPPALYALLAHDGSEWDAPLF
                     GEPTGNAVLPDASQLDLRTLQGKPGTGQEEADAVGSNNFAVSGALTADGRAIVADDMH
                     LGLRAPGLWFRVRLRYPDPQAAGGQVDVTGFSLPGLPAVIVGSNGHVAWGFTNSYIDT
                     ADYRTEPANAAVTVHEERIAVAGQADVLFPVRETAWGPILHTHADGSGDALRWVAQLP
                     GAVRLDFGDLARAGDLEAALHFADQAGIPAQNLVIGDRSGRIAWRLIGARPDRGPGCA
                     PAGFNAASNQDCAPWPIRSDAAPALIDPPSHRLWTANGRVLDGEALASVGHGGYDLGA
                     RARQIRDLLAIQERFDEHDLLAIQLDDRAVFLQRWWALLHDVIERSDDPALKRLGEAS
                     HQWGGRASVSSVSYRVVREFRSQVMQTLSDALLAPANARLGEDYLDPRLAQLEGVAWP
                     MLQQRPANLLPPAFDSWDALLVDAARRTEDELSKQGPLAQRSWGERNTAAICHPIARA
                     LPDFAKRWLCMPADRLPGDRDMPRVQTPNFGASERMVVSPGHEADGIVHMPGGQSGHP
                     LSPYWGAGHEDWVHGRPTPFLPGKAQHVMTLVPAR"
     gene            complement(3056..4747)
                     /gene="asnB"
                     /locus_tag="QEL58_001082"
     CDS             complement(3056..4747)
                     /gene="asnB"
                     /locus_tag="QEL58_001082"
                     /EC_number="6.3.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005988264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine synthase B"
                     /protein_id="HDS1675580.1"
                     /translation="MCSIFGIFGLQAGDDLPSLRRHALELSQRQRHRGPDWSGVYLDE
                     GALLVHERLAIVDPAGGSQPLLSADGQLALAVNGEIYNHQQLKAALTAAYDFQTGSDC
                     EVINALYRQGGSPAQWLEQLNGIFAFALWDRDSGRVLVARDPVGVVPLYWGHDAQGRL
                     RVASEMKALVDTCADVAQFPPGHYFDSASGELVRYYQQPWREYADVQGRQADLAELRQ
                     AFEHAVERQLMSDVPYGVLLSGGLDSSLVAAVAARYARRRIEDGGQTEAWWPRLHSFA
                     IGLKGSPDLAAAAIAAEALGTVHHGFEYTFEEGLDALPEVIRHIETYDVTTIRASTPM
                     FLLARRIKAMGVKMVLSGEGSDEIFGGYLYFHKAPDAREFHDELVRKLDALHNYDCLR
                     ANKSMMAWGVEPRVPFLDREFLDVAMRFDAAHKMVGAGFGGRRIEKAVLREAFDGYLP
                     DSILWRQKEQFSDGVGYGWIDGLKAHAEAQVSDRVLAAADKRFAHNPPQTKEAYYYRH
                     LFEQFFPSRAAAETVPGGKSIACSSPAAIAWDASFAAAADPSGRAIAGVHEQALA"
     gene            5095..5973
                     /locus_tag="QEL58_001083"
     CDS             5095..5973
                     /locus_tag="QEL58_001083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010486286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sel1 repeat family protein"
                     /protein_id="HDS1675581.1"
                     /translation="MQHSNGRTGALAALLCLGLAACQTVPPPSPLPPAQLQSLEQRGT
                     DGSFDGAWDTAQTFEHFNDPRAITYYERAAAITPWTFHNTKAEEALGRIWTSGTLRHA
                     DSPHIDPAPVLRASWRRGERAYLAAANHGNPYAFHELATAYRARSDAQLALRWDLRAM
                     IYHRYPSRSSRLPDAVAAQAGTVHPLVARIQRRAERGDAEAQVDLGALLERGVGLPRD
                     PARALQLYQLAGAQGNVFGQYFAGLLLGRSAPGVEKNTDAATQWFARAEAQHFYMAAP
                     SYWKKAIEPPFFIFSE"
     gene            complement(6054..7181)
                     /gene="dapE"
                     /locus_tag="QEL58_001084"
     CDS             complement(6054..7181)
                     /gene="dapE"
                     /locus_tag="QEL58_001084"
                     /EC_number="3.5.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012479618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinyl-diaminopimelate desuccinylase"
                     /protein_id="HDS1675582.1"
                     /translation="MSAVLDLTCELIARPSVTPDDAGCQALLAARLKQAGFHCDHLRL
                     GEVDNLWATHGHGAPVLVLLGHTDVVPPGPRQAWTSDPFTPTIRDGVLYGRGTADMKG
                     SVAAFVVAAEQFVAAHPDHPGTLAVLLTSDEEGDAIDGVRHVARLFAERGQRIDWCIT
                     GEPSSTATLGDLLRVGRRGSLSAKLRVQGVQGHVAYPEKARNPIHQAAPALAELSARR
                     WDEGYESFPPTSLQISNIHAGTGANNVIPGELEVDFNIRYNPHWDAPKLEAEIAALLD
                     RHGLQYTLKWHRSGEPFYTPEGTLRATARAVLAEHIGRAPEESTGGGTSDARFIAPLG
                     AQCIEVGPVNASIHQVDENVRVDELEALPGLYQRLVERLLV"
     gene            complement(7178..7549)
                     /locus_tag="QEL58_001085"
     CDS             complement(7178..7549)
                     /locus_tag="QEL58_001085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014646513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenate reductase"
                     /protein_id="HDS1675583.1"
                     /translation="MAMSTTVYGLKNCDTCKKATKWLDRFGVPYTFVDYRDNKPSPET
                     LLEWAAQLGGLAAMVNKSSTTWRQLPDNRKAADSDAEWKLLLREYPQLIKRPVVVTAD
                     GTVSQGFSDNGFKARFGVGGA"
     gene            complement(7581..8447)
                     /locus_tag="QEL58_001086"
     CDS             complement(7581..8447)
                     /locus_tag="QEL58_001086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014036518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675584.1"
                     /translation="MTAPEDLAQSAIYRHPSDTLFGRMLPRLLHAPRWTRLRRALSRR
                     WPIPALVSDVRDVVYVSWWVDVRHAPPPPPGHHYVVHEGRTPYTILSYRHGHFGPGMA
                     GPLRALMPSPRQSNWRWYLRRDDAPDGTPVVLFDRNVMDQLAFVAGARAFSDAMQPHL
                     STRFEHQIRADGGGQTWIEGGQGSAPALHLQWRAAEGWNPSAWAGFCDGHDARLRFLT
                     CQDEAIARTCDGRWASTRIDLPVDTTQLQPLQLEGGAHCPRLQAMGVNLAEGLALRLP
                     AVPFRVVSERLL"
     gene            complement(8450..9511)
                     /gene="dapD"
                     /locus_tag="QEL58_001087"
     CDS             complement(8450..9511)
                     /gene="dapD"
                     /locus_tag="QEL58_001087"
                     /EC_number="2.3.1.117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3,4,5-tetrahydropyridine-2,6-dicarboxylate
                     N-succinyltransferase"
                     /protein_id="HDS1675585.1"
                     /translation="MATKPAKKTAATPKSAAAKKPAAVPAAKKAAAPKKAAAVKAPAK
                     KVAAPKKAPAKSAEAARAETIARKSLRKPAAPGVEELKFGIESAFERRATLTLHELEG
                     STKPLVNRVIDGLESGEFRVAEPDGHGGWKVNEWLKKAVLLYFRVNDMAVVDARPAPF
                     WDKVESRFAGYDEAKFRRGGVRVVPGAIARRGTYFGKDVVLMPSFTNIGAYVGEGTMV
                     DTWATVGSCAQIGQHCHLSGGAGIGGVLEPLQASPTIIEDHCFIGARSEVVEGVVVGH
                     HSVIGMGVFLSQSTRIYNRATGEISYGYIPPYSVVVSGSLPSKDGTHSLYCAVIVKQV
                     DAKTRSKTSVNDLLRGLAD"
     gene            complement(9511..12138)
                     /locus_tag="QEL58_001088"
     CDS             complement(9511..12138)
                     /locus_tag="QEL58_001088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005408755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="[protein-PII] uridylyltransferase"
                     /protein_id="HDS1675586.1"
                     /translation="MLPASSLLDTPAASLNDPDWAAAARQALQQADARLYRRFDQGDN
                     IERLLALRARAADHLIRLAWQRCLPADSGLSLFAVGGYGRGELFPRSDIDLLVFGEPP
                     AQLAHEPALARLFALLWDCGLAVSHAVRSAAQCREAAADQTVLTALIEARPILAEEAT
                     RRALREAIDDRELWPARTFFLAKLEELRNRHQRFGDTADNLEPDLKDGPGGLRDLNTL
                     GWMALRAFGVRDLEALVGLGHLGADEAAALKRERAVLARLRFGLHLVARRPEERLRFD
                     YQKTLAARLGFEDDAENLGVEKMMQGFYRAALVVRRISDRLLQRFEEQFDGEAQPEPL
                     TVGFSLRRGYLAANDADWPRGNIGQVFALFASWANNPQVRGLHSLTARALAEALPVLP
                     AYDVADADAREQFLALLRGQRPVDTLSRMARLGVLGQWIPAFAQVSGRMQFDLFHVYT
                     VDQHTLMVLRNIGLFASSRADERFSIAHEVWPRLRKPELLLLAGLFHDIAKGRGGDHS
                     ELGAVDARAFCQAHALSGTDTELVAWLVEQHLRMSVTAQKQDIADPVVIHRFATLVGS
                     RDRLDYLYLLTCADIAGTSPKLWNAWKDRLLADLYFATRRALREGLEHPVPAAERVAE
                     ARDSVRALVREQGYDDATIDRQFAVMPDEGFIRLRPEQLAWQAAALVPVKQGQALVKV
                     RRISVDDPALEVFVHSPDRDGLFAAIVMTLDRKGYGIHRARVLDGPADTIFDTFEVNP
                     ADTFADGSSTNLEAALREALSGDLTRLRPSRRVVPRQLRHFRFAPRIEFRDEPGATRF
                     ALVAPDRPGLLADVAFVLRNQGLRVHDARIATFGERAEDTFVISDEHDLPLTEPARQQ
                     LHDAMLACLDPDRNAGDPA"
     gene            complement(12141..12983)
                     /gene="map"
                     /locus_tag="QEL58_001089"
     CDS             complement(12141..12983)
                     /gene="map"
                     /locus_tag="QEL58_001089"
                     /EC_number="3.4.11.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014036515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I methionyl aminopeptidase"
                     /protein_id="HDS1675587.1"
                     /translation="MARIASWVAFVQIAAGSAIMGAMSVNLKTPQEIEMMRIAGRLAS
                     EVLDIVTPHVKPGVTTEELDRICHDHIVNVQGAIPANVGYRGFPKTVCTSVNNVICHG
                     IPSEGKVLKDGDIVNIDVTVIKDGWHGDTSRMYFVGTPSVMARRLVETTYEAMWRGIR
                     AVRPGATLGDIGHAIQSYAEGERFSVVREYCGHGIGKVYHDEPQVVHYGRPGQGLVLQ
                     PGMTFTIEPMINEGTRYNKVLPDGWTVVTKDRKLSAQWEHMIAVTETGVDVLTLSPGE
                     SQVS"
     gene            13157..13687
                     /locus_tag="QEL58_001090"
     CDS             13157..13687
                     /locus_tag="QEL58_001090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010486309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spore coat protein U domain-containing protein"
                     /protein_id="HDS1675588.1"
                     /translation="MRSPVRSPLAWAMAGLLMSSPVLAADTTTFNVTLVVTKACTITA
                     AAATNVDFGTAASTTATPTLGQGTVTAQCSALTPYTISLNAGANASTANDVTTRRMKN
                     TNAAVTANNYVGYQLYQDAAHTLVWGATTGTNTQAGIGTGLAVPYIVYGQILNLSTNN
                     PATGNYLDTVTATITY"
     gene            13687..14436
                     /locus_tag="QEL58_001091"
     CDS             13687..14436
                     /locus_tag="QEL58_001091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone"
                     /protein_id="HDS1675589.1"
                     /translation="MEHARMAGSRPWRATGVALLALCLLAASTAGATSLQVAPTSLQL
                     EARQRAGELWLTNSGTSPVKLQVRVFRWVQQNGQEQLLPTDELVATPPMQELAAGQQQ
                     LVRVMRPTREPPPAQQYYRLIVDEVPDLSTRTDGMQFVLRYSIPVFVQPASGKLAARL
                     QARLVRLDDGRDGVEVSNSGDSYAQIADLALGSAKRPRIVHPGLLGYVLPGQVMRWPL
                     ERTAIDRDNDQITAKLNGESEQTPLSPPPAR"
     gene            14444..16822
                     /locus_tag="QEL58_001092"
     CDS             14444..16822
                     /locus_tag="QEL58_001092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019336944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial biogenesis outer membrane usher
                     protein"
                     /protein_id="HDS1675590.1"
                     /translation="MGALLAALAPAATEAADVSGAGATGAADVSGVSADAILPPPTPL
                     TASQTLYLDVSLNSTPRGLLPFTDNRGRLQASPEVLRQLGFNASGDAPVYLDQISGAV
                     VRYDAHMQTLALDVPLDQLTLPTTVLSRPQARAPAGSASPGVLFNYDVYGSRVDTLGN
                     LSLSSELRLFGIGNGTFENTAISRRYQQPSDRRWRGESVRLDTRWSLDFPDQAMTLEV
                     GDFYSGFVDWTRPVRLGGLQIGRNYGLQPYRVLTPTPSFLGQAVVPSTVELYVDGLRQ
                     YSGQVPVGPFQLAAQPGISGTGSAQVVVTDAFGRMQTLDFSFYGTQQLLAKGLSDWSL
                     GVGHLREDFGQRSFAYDDRTVASASWRGGVSDTFTGEAHAEGGGGLAQAGLGGWWLLG
                     SAGVFNAAYAHSDYHGLQGGQWALGYSWNNRRLNVNLRSVRSHGDYRDLGALQGNLPP
                     SISEQATVGMDLLRLGTLSASYLRLRYPDGEDNRYASLFWSRTWSQRWSAYLSVNQNL
                     DQSDDRSIYLSVTASLGNNRQASLSSQRNGDSQSWVADVTQPVPGDGSAGGVGWRAQV
                     RHGEDGNGGLAEVGILNDVGRYSFGASRQGGLNYAYASASGSLVWMGGHAFATREVSD
                     AFAVISTNGVGGVPVRLENRLIGVTDDRGLLLVSPLLSWQRNRVSIDTLDLPEDMRAD
                     RIEDWVTPRQRAGTRVTFQLRSRPSLSLTLLGMDGQPLEVGSEVQLPDGRQATVGYDG
                     LLYLEDVAAGSMLYVTTSRGQCRLKVPDLPRVVASGARPRPAPLHCIPEVAP"
     gene            16819..17853
                     /locus_tag="QEL58_001093"
     CDS             16819..17853
                     /locus_tag="QEL58_001093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010486313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spore coat U domain-containing protein"
                     /protein_id="HDS1675591.1"
                     /translation="MRMLLLGLLLVAGLLAAAPARAVAVCTAIADPTLPFGNVNSNAP
                     GATTGTLNITVNCTTSALSLLATTGVRVCVGIGAGSGGGSSASWRTMKTGTSDSMNFQ
                     LYNTSNFSQVTGLTPRGTPPAQELTLTYNVPLTGGNGTQATQLFAQIPANQILASGAY
                     SSTFSGASVVLTWAWNEVLLGTATVPATCNGGATGTNSASAAFSFTATANVLPQCGSY
                     VTTNMNFGNVTGGIPANIDQTATLTLTCLKNTAYQISLNNGQNNPAATSTRRMATTLG
                     TGTYYLTYELYRDSARSLRWGNTLNVDTVGGTGSGSAQQLTIYGRVPPVTGQPPAGTY
                     NDLVQVTITY"
     gene            18005..18223
                     /locus_tag="QEL58_001094"
     CDS             18005..18223
                     /locus_tag="QEL58_001094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010486315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675592.1"
                     /translation="MLVASTPAWAEPSSSAVQIRLTVVEACSGDTGGDHCPSPHLRSD
                     APQLPSQVRDLAPPADDDDAAPAVTVIY"
     gene            18223..18921
                     /locus_tag="QEL58_001095"
     CDS             18223..18921
                     /locus_tag="QEL58_001095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005412743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone"
                     /protein_id="HDS1675593.1"
                     /translation="MRTLLTLLALLLASPAAALDLLPTTLQLPADGGHTALWLYNPGP
                     GRWQGQVRILAWEQQADTERLRPSDQIVASPVQLDLPAGARQRVWLLPRLPSPVASER
                     AYRVVLAPSAPGLPRYSLPLFQGHAAPLAQPQLRSEVGPEPSHPTLRLTNSGTLHARL
                     HDLAFVADDGRRLVLLPGLAGYVLAGQERHWALPAHARGYAGGHFQARLQDGRVVELS
                     TPDPAIAANAPGGL"
     gene            19141..19947
                     /gene="rpsB"
                     /locus_tag="QEL58_001096"
     CDS             19141..19947
                     /gene="rpsB"
                     /locus_tag="QEL58_001096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011269915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S2"
                     /protein_id="HDS1675594.1"
                     /translation="MPQVTMRQMLEAGVHFGHQTRYWNPKMAPYIFGARGKIHIINLE
                     KTVPLFNDAMNFISSVAQKRGTVLFLGTKRSARETIKEEAERCGMPFMNQRWLGGTLT
                     NFRTVKQSVARLKELEAGETDGTFEKLVKHEVLGLRRERDKLEASLGGIKDMNRLPDA
                     IFVIDIGHEDIAIKEAKKLGIPVIAVVDTNYNPELVDYAIPGNDDAIRAVQLYARAAA
                     DAVLEGKAAAPHAASVREEEFAEAAAEGEDKPARRAPAKKAAKKGDDAQA"
     gene            20074..20949
                     /locus_tag="QEL58_001097"
     CDS             20074..20949
                     /locus_tag="QEL58_001097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005408747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Ts"
                     /protein_id="HDS1675595.1"
                     /translation="MEITASLVKELRERTGAGMMECKKALTEANGDINAAAEAMRKSG
                     AAKADKKADRVAAEGRLGLAQDGGKAVLVEVNSETDFVANDDNFKSFVNAVAAAALAS
                     GANDVEAVKAAKLADGRTVEEARATAVQTLGENIQIRRMVKVDGNNTIGAYVHTNGKV
                     GVLVDLVGGDVELARGLAMHVAALKPPHNKAADVPAEFVEKEKEIELAKMSEKDKSKP
                     ADILEKIISGKINKIVSDVTLYGQTYVLGDTTVEQVVKAAGADVAGFKLLIVGEGIEK
                     VVEDYAAEVAKAMQV"
     gene            21200..22738
                     /locus_tag="QEL58_001098"
     CDS             21200..22738
                     /locus_tag="QEL58_001098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004151067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HDS1675596.1"
                     /translation="MPPELTAALALCRNLPSPPGIALRIIELAQDPEADIATAADIIA
                     IDMALSARMLRIANSPLYASRRRIENLGQALTMLGLNATISLALGFTVTQGLTGGSGE
                     GHDLRQRAWKRSILSALAASQLGQARGLRRLEELMLAGLLQDLGVLCLAQAESERYLP
                     LLREARDNTDLVAREREELGCSHADVGAWVAEQWGLPRYLVESISHSEDQDAVESPFQ
                     ACVQLSGAVADIWLDEDADTARERALQQVHDQLELDSARFDQVLARISEALPDIASLF
                     EAGLNSPSRVRELIDHAQELATLRNLRELQDADQARRRADEFEARAKRLADQAHRDAL
                     TGVLNRRQLEAVLEQEFLRAGRQGWPLSVAFIDLDDFKKINDAHGHLTGDEVLRAFAG
                     KLQGQLRNSDTVARFGGEEFVALLPNTSETVALDVIRRVLANIVATPMAELEGGPLFV
                     TFSAGVATQGGYERFADVQDLLRAADDVLYRSKNLGRNRVIARSPGALGHDELSATAG
                     AELG"
     gene            22860..23588
                     /locus_tag="QEL58_001099"
     CDS             22860..23588
                     /locus_tag="QEL58_001099"
                     /EC_number="2.7.4.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UMP kinase"
                     /protein_id="HDS1675597.1"
                     /translation="MSKLAYRRILLKLSGEALMGDEDYGIDPKIINRLAREVIEAQQA
                     GAEVALVIGGGNIFRGAGLAAGGMDRVTGDQMGMLATVINALAMQDALEKLGAKARVM
                     SAIKINDVCEDYIRRRAIRHLEKGRLVIFAAGVGSPFFTTDSGAALRAIEIGADLLLK
                     ATKVDGVYDKDPNKHSDAVRFDSLSYDEVIRRGLEVMDTAAFALARDSDLPMRVFDMG
                     QPGELLKILNGENIGTLVQGRDQA"
     gene            23685..24239
                     /gene="frr"
                     /locus_tag="QEL58_001100"
     CDS             23685..24239
                     /gene="frr"
                     /locus_tag="QEL58_001100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011036562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome recycling factor"
                     /protein_id="HDS1675598.1"
                     /translation="MLNDIKNNAQTRMAKSIDALKHTLTSIRTGRATPALLDRVTVNA
                     YGNASTPLNQVASISNADAHSLLVTPFDKSMIKEIEKGLYNHEFTPNTLGAAIRINMP
                     PPTEERRKELAKQVQKEGEGAKIAIRNIRQDANKEIAKLVKDKAISEDEKKRGEDDIQ
                     KLTDANIKDVDKVVADKEKELLSV"
     gene            24245..25012
                     /gene="uppS"
                     /locus_tag="QEL58_001101"
     CDS             24245..25012
                     /gene="uppS"
                     /locus_tag="QEL58_001101"
                     /EC_number="2.5.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014036505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="di-trans,poly-cis-decaprenylcistransferase"
                     /protein_id="HDS1675599.1"
                     /translation="MPSVPPPLPAALPRHVAIIMDGNGRWAQQRRRPRVIGHRAGARA
                     VNRTIERCLELGIPALTLFAFSSENWGRPQEEVDALMKLFLGALDREVDELHRRGVRV
                     RFIGERERFGAGLVSRMQLAEQRTADNTTLTLSIAASYGGRQDIARAARALAVEVAAG
                     RLLPEQIDESLLGGQVALADLPAPDLFIRTGGDTRISNFLLWQLAYTELWFTEALWPD
                     FDAELLQQALDAYASRERRFGLTSAQIAALATETSSP"
     gene            25009..25845
                     /locus_tag="QEL58_001102"
     CDS             25009..25845
                     /locus_tag="QEL58_001102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011258695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidate cytidylyltransferase"
                     /protein_id="HDS1675600.1"
                     /translation="MTKTRVLAALIMAPVAIAAILLLPTQWLAAAAAAVLLIGLWEWL
                     KLAGIEDTLARTVLLVLNLLLMVLLVWADGSTLVLFQITTLAGVAWWLAALVWLRFFN
                     FGAQPTAPSRIVKMLAGTLAIVPAWAALVLIHAGGDPPGKQGHLWLLAALALVWAADS
                     GAYFAGRHFGKHKLAPRISPNKTWEGLFGGLLAGVAVAVGLGWVAGIDVAHLPGLLIT
                     SVVAVFASVLGDLFESLIKRHAGAKDSGHLIPGHGGVLDRVDGVLAAVPVFALGKEIF
                     GF"
     gene            25848..27038
                     /locus_tag="QEL58_001103"
     CDS             25848..27038
                     /locus_tag="QEL58_001103"
                     /EC_number="1.1.1.267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005408741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate reductoisomerase"
                     /protein_id="HDS1675601.1"
                     /translation="MNAAADLRRVTVLGATGSIGASTLDVIARHPQRYRATVLAAGRQ
                     LQALLALCRQHEPEHAVIADESLFAGLRDGLREAGLSTEAHAGAAALDQLAASDACDT
                     VVAAIVGAAGLSSTLAAAAAGKRILLANKESLVLAGELLTRTAERAGAEIIPIDSEHS
                     AIFQCLRSRDASIDGAGVRRILLTASGGPFRGRSRAELAQVTPAQAVAHPKWSMGPKI
                     SVDSATLMNKGLEVIEAHHLFAVPGERIEVLVHPQSLVHSLVEFVDGSTLAQMGLPDM
                     RTTLAVGLGWPQRIESGVAGLDLLAQGRLDFEAPDTDAFPCLALAWQAMQAGGTAPAV
                     LNAANEEAVSAFLQGRIGFLTIPELVANALSTLPTQAADTLEVLLSADQRARQLTLNA
                     IDAA"
     gene            27094..28452
                     /gene="rseP"
                     /locus_tag="QEL58_001104"
     CDS             27094..28452
                     /gene="rseP"
                     /locus_tag="QEL58_001104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019304858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RIP metalloprotease RseP"
                     /protein_id="HDS1675602.1"
                     /translation="MTDFIGSVWWMIVSLGLLVTFHEFGHYWVGRLCGVKILRFSVGF
                     GRPLWSRRDRHGTEFAIAAIPLGGYVKFLDEREVEVHPHERGQAFNHKTVWQRIAIVA
                     AGPIANLLLCILLLWAMFVIGKQDYSPTIGRVSGIAATAGLLSGDRVLRVDDRQVVTL
                     GDASMALTAAAMDRRDVKLEVLDPADQVRVRTLPLSQLPTGFDERRVPILAGLYWQSW
                     LQPALVDSLTADSAVAGQLQPGDLIVAIDGQRIDSVDQVIGEIQALGRAGGPGMIEVL
                     RGGERLALEVTPRQGKDGKGNPVWQIGVGFPTTYSPAYDTLLRYGPLDAVTVAVRETG
                     RLAADSLGMMGRIVTGKASLQNVSGPVTIARVANVSAKRGLDWFLQFLALLSLSLCII
                     NLLPIPILDGGHLLYYLIELVKGSPLSERAIAAGQYIGLALLAGLMGLAFYNDILGLV
                     PR"
     gene            28527..30890
                     /gene="bamA"
                     /locus_tag="QEL58_001105"
     CDS             28527..30890
                     /gene="bamA"
                     /locus_tag="QEL58_001105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017117511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamA"
                     /protein_id="HDS1675603.1"
                     /translation="MTRLPNRRLLALALAAVTGAPALAQAAEPFTVSDIRVDGLQRIS
                     SGTVFTYLPVERGETITDNKVGETIRALYKTGFFEDVQLDRQGSILVVTVKERPAINK
                     LTVTGNKDIKSEQLLKGLSDIGLTEGGTFDRLSLDRVTQELRRQYNDRGKYTVEITPT
                     VSPLDRNRVDIAIAIKEGKAAKIRHVNLVGTEKFESKDILETWESREHNWASWYRRDD
                     QYSKEKLSGDLEKLNSWYLDRGYVDFSIDSTQVSISPDKRDMFLTAGVTEGAQYKISE
                     IKVSGDTILPQEDVERMVIQKSGDTFSRALLEFSSDTITNSLSNIGYAFAKVNPIPTT
                     NRPDQTVAINMQVVPGPRVSVRRILFRGNTRTSDEVMRREMRQFENSWYSQAAIDRSK
                     IRLQRLGYFESVDVETPAVSGSNDQVDVVYNVKETTSGSFVFGLGYSQSYGMTTSVQL
                     SQNNFLGGGNRVSVEASRSSYLQRYGFSYTNPYFTDDGVSLGYNLSWRELDYSDFNTA
                     QYNSTNGSAQVVFGVPITETDTVSLMFGIDSNQITTYPGSTPPSIIDYIDAVGTRTFH
                     AWRTELGWARDSRNDYFMPTRGTYQRIGLETTLPGSTIEYYKLNYQISKYWPIMPSLV
                     INTRAEVGYGDAYGKDYTRTVTDADGKTRTVTASGLPFFENFYAGGTNSVRGFEDNTL
                     GPREATNGYPEGQPLGGSLKTVGSVEAYFPRLFDSPSARVSAFVDFGNVYNGTKNFKA
                     NELRVSTGVALLWRAPVGPISISYAFPLKKEDDDKIERLQFTFGGQF"
BASE COUNT         5200 a        10939 c        10140 g         4886 t
ORIGIN      
        1 ggtggtcgcc gggaattgcc cagcgcctgc ggctcagtgc gccggggcgc cgttgccgtc
       61 gatcttgctc agctggtaga gctccaggcc gatgcgcttg atcaggccca gctgctgctc
      121 cagccaccag gcatggtctt cctcggtgtc cttcagctgc gccagcagca tgtcgcggct
      181 gacgtagtca cccttctctt cgcacagctt catgccggcg gcgagattgt tccgaaccgc
      241 gtattcagta tccagatcct tctgcagcat ctcctccacg gtcttgcccg gctcggtggc
      301 atgcgggcgc atgtccgggt cgccgcccag gaacaggatg cggcgcagca gcgcgtcggc
      361 gtgctgggtc tcttcttcca tctcgtggtt caggcgttcg tacagcgcga acaggccctg
      421 gtcctcgtag cggcgggaat ggatgaagta ctggtcgcgg gcagcaagct cgccgcgcag
      481 cagttccttc aggcaggcga tgacgtccgg gttgcctttc atggggggct cctgtgaatc
      541 gatgcggcat agggtgacgc atttccggcg acggtgatct aatcggaatc agtcgcagtt
      601 gcgcctgcgg ctacaatcga ccctcgagcg tggaaaggac gtgcgatgcg acgtacatgg
      661 cgttgggtgc tgggcgtgtt gatcgccatc gtgctggcca ccgttctggt gctgtggctg
      721 ctgctgcgcg gcagcctggc cgacctggac ggcgagcatg cgctgccggg cctggccaag
      781 ccggtcaccg tcgagcgcga tgcgctgggc gtggtcacca tcaccgccgg cagccaggcc
      841 gacgcgatgc gtgcgctggg ccgcgtgcat gcgcaggaac gctatttcga gatggacctg
      901 atgcggcgca gtgccgcggg cgagctgtcg gcgctgttcg ggccgaaggc cgtcgacgcc
      961 gacaagcgca tgcgcgtgca tcgcctgcgc gcgcgtaccg aggcgaacat gcaggccgcg
     1021 ctgggcagca acagcgaggc cgtgggcgcc tacgtcgccg gcgtcaatga gggactggcc
     1081 ggacttccgg tgcggccatg ggcgtacctg ctgctgcgcc aggcgccgca accctggcgg
     1141 gccagcgaca gcgtgctcac cgggctggcc atgtacgccg acctgcagga tccgggcaac
     1201 cagaccgagc tggcgttgag ccgcatccgc gcggtggtgc cgccggcgct gtacgccctg
     1261 ctcgcccacg atggcagcga atgggatgcg cccctgttcg gcgaaccaac cggcaacgcc
     1321 gtgctgcccg acgccagcca gctcgatctg cgcacattgc agggaaagcc gggcaccgga
     1381 caggaagagg ccgatgcggt cggcagcaac aacttcgccg tatccggtgc actgaccgcc
     1441 gacggccgcg ccatcgtcgc cgatgacatg cacctgggac tgcgcgcgcc ggggctgtgg
     1501 ttccgcgtgc gcctgcgcta ccccgacccg caggccgcag gcggccaggt cgatgtcacc
     1561 ggtttctcgc tgcccggcct gccggcggtg atcgtcggca gcaacgggca cgttgcctgg
     1621 ggcttcacca acagctacat cgacacggcg gactaccgca ctgaaccggc caacgctgcg
     1681 gtcaccgtgc atgaggaacg catcgcggtg gcgggccagg ccgacgtgct gttcccggtg
     1741 cgcgaaaccg catggggacc gatcctgcac acgcatgccg atggcagcgg cgatgccctg
     1801 cgctgggtcg cgcagctgcc gggtgcggtg cgcctggact ttggtgacct ggcccgtgcc
     1861 ggcgatctgg aagccgccct gcacttcgcc gaccaggccg gcatcccggc gcagaacctg
     1921 gtgatcggcg accgcagcgg acgcatcgcc tggcgcctga tcggcgcccg tccagaccgc
     1981 ggccccggtt gtgcaccggc cggcttcaac gccgccagca accaggactg cgcgccttgg
     2041 ccgatccgca gcgacgccgc accggcactg attgatccac ccagccatcg cctgtggacc
     2101 gccaacggcc gcgtgctcga cggcgaggca ttggccagcg ttggccatgg tggttatgac
     2161 cttggggccc gtgcgcggca gatccgcgac ctgctggcca tccaggagcg cttcgacgag
     2221 cacgacctgc tggcgatcca gctcgacgac cgcgcggtgt tcctgcagcg ctggtgggca
     2281 ctgctgcacg acgtcatcga acgcagtgac gatcctgcgt tgaagcggtt gggagaggcc
     2341 agccatcaat ggggcggccg cgcctcggtc agctcggtca gctaccgggt ggtgcgcgag
     2401 ttccgctcgc aggtaatgca gacgctgtct gacgctttac tggccccggc caacgctcga
     2461 ctgggagagg actacctgga cccgcggctg gcgcagctgg aaggcgtcgc ctggccgatg
     2521 ctgcagcagc gcccggccaa cctgctgccc cctgccttcg acagctggga cgcactgctg
     2581 gtcgatgcgg cacgacgaac cgaggacgaa ctgtccaaac agggcccgct ggcccagcgc
     2641 agctggggcg aacgcaacac cgcggcgatc tgtcatccga tcgcacgcgc gctgccggac
     2701 ttcgcaaagc gctggctgtg catgccagcc gatcgcctgc ccggcgaccg cgacatgccg
     2761 cgcgtgcaga cgccgaattt cggcgcctcc gagcggatgg tggtctcgcc aggccacgag
     2821 gccgatggca tcgtgcacat gcccggcggc cagagcggtc atccgttgtc cccctactgg
     2881 ggtgccggcc atgaagactg ggtgcatggc cgacccaccc cgttcctgcc gggcaaggcc
     2941 cagcatgtga tgacgctggt gcctgcacgt tgacgatcgc ggccagatcc ttctcccaaa
     3001 ggagaaggaa tctgaccccg ccattgccgg ccagcggccg gcactaccgc cggcgctagg
     3061 ccagtgcctg ttcgtgcacg ccggcaatcg cacgaccgga cgggtcggcc gctgccgcga
     3121 agctggcatc ccatgcaatc gccgccggcg acgaacaggc gatcgacttg ccgcccggca
     3181 ccgtctcggc agctgcgcga ctggggaaga actgctcgaa caggtggcgg tagtaatacg
     3241 cctccttggt ctgcggaggg ttgtgcgcga agcgcttgtc cgcagccgcc agcacacggt
     3301 cgctcacctg tgcttcggca tgcgccttca gcccgtcgat ccagccgtag ccgacgccat
     3361 cgctgaactg ttccttctgc cgccacagga tgctgtccgg caggtagccg tcgaacgcct
     3421 cgcgcagcac cgccttctcg atgcgacggc caccgaaccc ggcaccgacc atcttgtgcg
     3481 cggcgtcgaa acgcatcgcc acgtcgagga attcgcgatc caggaacggc acgcgcggct
     3541 ccacgcccca ggccatcatc gacttgttgg cgcgcaggca gtcgtagttg tgcagggcat
     3601 cgagcttgcg caccagttca tcgtggaatt cgcgcgcatc cggcgccttg tggaagtaca
     3661 ggtagccacc gaagatctcg tcgctgcctt cgccggacag caccatcttc acccccatcg
     3721 ccttgatccg ccgcgccagc aggaacatcg gcgtcgatgc gcggatggtg gtgacgtcat
     3781 aggtctcgat gtggcggatc acttccggca gtgcatccag gccttcttcg aaggtgtatt
     3841 cgaagccgtg gtgcacggtg cccagcgctt cggcggcaat cgctgcggcc gccagatcgg
     3901 gcgagccctt caggccaatc gcgaatgaat gcaggcgcgg ccaccaggct tcggtctggc
     3961 cgccgtcctc gatgcgacgg cgtgcatagc gcgcagccac ggcggcgacc agcgaggaat
     4021 cgaggccacc ggacaacagc acgccgtacg gcacgtcact catcagctgg cgttcgaccg
     4081 catgctcgaa ggcctggcga agctcggcca ggtcggcctg gcggccctgc acatccgcgt
     4141 actcgcgcca cggctgctgg taatagcgca ccagttcgcc gctggcgctg tcgaaatagt
     4201 ggcccggcgg gaactgcgcg acgtctgcac aggtgtccac cagcgccttc atttccgagg
     4261 ccacgcgcag gcgaccctgc gcatcatggc cccagtacag cggcaccacg ccgaccgggt
     4321 cacgcgccac cagcacgcgg ccgctgtcac ggtcccacag cgcgaaggca aagatgccgt
     4381 tgagctgctc cagccactgc gccggcgatc cgccctggcg gtacagcgcg ttgatcactt
     4441 cgcaatccga gccggtctgg aagtcatagg cggcggtcag cgcggccttc agctgctggt
     4501 ggttgtagat ctcgccgttc accgccagcg ccagctggcc atcggccgac agcagcggct
     4561 gcgagccgcc ggccggatcg acgatggcca gccgctcgtg gaccagcagt gcgccttcgt
     4621 cgaggtacac gccgctccag tccgggccgc ggtggcgctg gcgctgcgac agttccagcg
     4681 cgtggcggcg cagggaagga agatcgtcac cggcctgcag gccgaagatt ccgaagatcg
     4741 aacacatggc ggagctcctg ttgggggaat tcacggggtg ggaaggtgtt cgaccggcca
     4801 tccaggcccg ggtggggctg cgcccgggca caaaaaaacc cgcatcggcc gatgcgggtt
     4861 ttctggtgtc cgggcgtatg ttgctgtcta tctacccagg gcgcagtccc gcatcggccg
     4921 cgcacgatta ttcgcgcgca gattattgcg gttgttgttg ttgacggcgg tggccaagtg
     4981 gatcgacatg gcatcgaccc taccccggtt tccggcacgg tgcaacagtt gcgtcggcaa
     5041 ccagccggac cgcctggcgg cgcataatgg cccaccccga aatgtgtaac tggaatgcaa
     5101 cacagcaatg gacgcaccgg ggcgctggcc gccctgctct gcctgggcct ggccgcatgc
     5161 cagaccgtgc ccccgccctc gcccctgccg ccagcccagc tgcaaagcct ggagcaacgc
     5221 ggcaccgacg gcagcttcga cggtgcctgg gacaccgcgc agaccttcga gcacttcaac
     5281 gatccgcgtg cgatcacgta ctacgagcgc gccgccgcga tcacgccctg gaccttccac
     5341 aacaccaagg cggaagaagc actgggccgg atctggacgt ccggcacgct gcggcatgcc
     5401 gacagccccc atatcgatcc tgcaccggtt ctgcgtgcgt cgtggcgacg tggcgaacgc
     5461 gcctacctgg cagcggccaa ccacggcaat ccctacgcgt tccatgaact cgccactgcc
     5521 tatcgcgcgc gcagcgacgc gcagctggca ttgcgctggg acctgcgcgc gatgatctac
     5581 caccgctatc caagccgttc ctcacgactg ccggatgcgg tggccgcgca ggccggcacc
     5641 gtgcacccgt tggtggcccg catccagcga cgcgccgagc gcggcgatgc cgaagcgcag
     5701 gtggacctgg gcgcgctgct ggaaagaggc gtgggcctgc cgcgcgatcc ggcgcgcgcc
     5761 ctgcagctgt accagctcgc cggtgcgcag ggcaacgtgt tcggccagta cttcgctggg
     5821 ctgttgctgg gtcggagcgc gccgggcgtg gagaaaaaca ccgatgcagc gacgcaatgg
     5881 ttcgccaggg ccgaagcgca gcacttctac atggccgcgc cgagctattg gaagaaggcg
     5941 atcgagccgc cgttcttcat tttctcggag tagtagagcc gagcatggct cggctctaca
     6001 ggaaagcagc ctcagccgga ggcgtgccga ccaacggccg gcacccaccc tcctcacacc
     6061 agcagccgtt ccaccagccg ctggtacagc cccggcaacg cttccagctc gtccacgcgc
     6121 acgttctcgt ccacctggtg gatgctggcg ttgaccggcc ccacttcgat gcactgcgca
     6181 cccagcggtg cgatgaagcg cgcgtcggag gtgccaccgc cggtgctttc ctccggcgca
     6241 cgaccgatgt gttcggccag cacggcacgc gcagtggcgc gcaaggtacc ttccggggtg
     6301 tagaacggct cgccgctgcg atgccacttc agcgtgtact gcaggccatg ccggtcgagc
     6361 agtgcggcga tctccgcctc cagcttcggc gcgtcccagt gcgggttgta gcggatgttg
     6421 aaatccacct ccagctcacc gggaatcacg ttgttggcgc ccgtgccggc atggatgttg
     6481 gagatctgca ggctggtcgg cgggaagctc tcgtagccct catcccaacg ccgcgcactc
     6541 agttcggcca gtgccggcgc ggcctggtgg atgggattgc gcgccttttc cggatacgcc
     6601 acatgcccct gcacgccctg tacgcgcagc ttggccgaca ggctgccgcg acggccgacc
     6661 cgcagcaggt cacccagcgt cgcggtcgac gaaggctcac cggtgatgca ccagtcgatg
     6721 cgctggccac gctcggcgaa caggcgtgcc acatggcgca cgccatctat ggcatcgcct
     6781 tcttcgtcgc tggtcaacag caccgccagc gtcccgggat gatcgggatg cgcggccacg
     6841 aactgctcgg cggcgaccac gaacgcggcc acgctgccct tcatgtcagc cgtgccgcgg
     6901 ccatacagca cgccgtcacg gatcgtcggc gtgaacgggt cgctcgtcca cgcctgacgt
     6961 gggccgggcg gcaccacgtc ggtgtgtccc agcagcacca gcaccggcgc gccatggccg
     7021 tgggtcgccc acaggttgtc gacctcgccc aggcgcaggt gatcgcagtg gaacccggcc
     7081 tgcttcaggc gtgccgccag caacgcctgg cagccggcat cgtccggcgt caccgagggg
     7141 cgtgcgatca gctcgcaggt caggtcgagg acggcactca tgcgccgccc acgccgaagc
     7201 gtgccttgaa tccgttgtca ctgaagccct ggctgaccgt gccgtcggcg gtgaccacca
     7261 cgggccgctt gatcagctgc gggtactcac gcagcagcag cttccattcg gcatccgagt
     7321 cggccgcctt gcggttgtcc ggcaattgcc gccaggtggt ggaggacttg ttgaccatcg
     7381 ccgccaggcc gcccagctgc gcggcccatt ccagcagggt ttccgggctg ggcttgttgt
     7441 cgcggtagtc gacgaaggtg tacggcacgc cgaagcggtc cagccacttg gtcgccttct
     7501 tgcaggtatc gcagttcttc aaaccgtaga cagtggtgct catggccatc tgtgatgctg
     7561 gaaaacagag ggccagaatc tcacaacagg cgctcggaca cgacccggaa cggcaccgcc
     7621 ggcagccgca gcgccagccc ttcggccagg ttcacgccca tcgcctgcag gcgcggacag
     7681 tgcgctccgc cctccagctg cagcggttgc agctgggtgg tatccaccgg cagatcgatg
     7741 cgggtgctgg cccagcgccc atcgcaggta cgtgcaatgg cctcgtcctg gcaggtcagg
     7801 aatcgcaacc gcgcgtcatg gccatcgcag aacccggccc atgccgaagg gttccagcct
     7861 tcggcggcgc gccactgcag atgcagcgcc ggggcactgc cctgcccgcc ttcgatccag
     7921 gtctgcccgc cgccatcggc gcgtatctgg tgttcgaaac gcgtggacag gtggggttgc
     7981 atcgcatcgc tgaacgcgcg tgcaccggcc acgaaggcca gctggtccat cacgttgcgg
     8041 tcgaacagca ccaccggcgt cccgtccgga gcatcgtccc ggcgcaggta ccagcgccag
     8101 ttgctctggc gtggcgaggg catcagcgcg cgcagcggtc cggccatgcc gggcccgaaa
     8161 tggccatggc gatagctgag gatggtgtac ggcgtacgcc cttcatgcac gacgtagtga
     8221 tggcccggcg gcggtggcgg tgcatggcgc acatcgaccc accagctcac atacaccacg
     8281 tcgcgcacgt cgctgaccag cgccggtatc ggccagcgcc gcgacagcgc acgccgcagc
     8341 cgggtccagc gtggggcgtg cagcaggcga ggcagcatcc gcccgaacag ggtgtcggac
     8401 ggatgccggt agatcgcgga ctgcgccagg tcttccggcg ccgtcacctt cagtcggcca
     8461 ggccgcgcag caggtcgttg acgctggtct tgctgcgggt cttcgcatcg acctgcttga
     8521 cgatcaccgc gcagtacagc gagtgggtac cgtccttgct cggcagcgaa ccggacacca
     8581 ccacgctgta tggcgggatg tagccgtagc tgatctcgcc ggtagcgcgg ttgtagatgc
     8641 gcgtgctctg gctgaggaac acgcccatgc cgatcacgct gtggtggccg accacgacgc
     8701 cttccaccac ttccgaacgc gcaccgatga agcagtggtc ttcaatgatg gtcgggctgg
     8761 cctgcagcgg ttccagcacg ccgccgatgc cggcgccgcc ggacaggtgg cagtgctggc
     8821 cgatctgcgc gcaggagccc acagtggccc aggtatcgac catggtgcct tcgccgacgt
     8881 aggcaccgat gttggtgaag ctcggcatca gcaccacgtc cttgccgaag tacgtgccgc
     8941 ggcgggcgat cgcacccggc accacgcgca cgccgccacg gcggaacttc gcttcgtcat
     9001 agccggcgaa acgcgattcg accttgtccc agaacggcgc cgggcgcgca tcgaccaccg
     9061 ccatgtcgtt gacgcggaag tacagcagca cggccttctt cagccactcg ttgaccttcc
     9121 agccgccatg gccgtccggc tcggcaaccc ggaactcacc gctttccagg ccatcgatca
     9181 cccggttcac cagcggcttg gtcgagcctt ccagctcatg cagggtcagc gtggcgcggc
     9241 gctcgaaggc gctctcgatg ccgaacttca gctcttccac gcccggcgcg gccggcttgc
     9301 gcagcgactt gcgggcaatg gtttcggcgc gcgcggcttc ggcgctcttg gccggggcct
     9361 tcttcggtgc agccaccttc ttcgccgggg ccttcaccgc agcggccttc ttcggcgcgg
     9421 cagccttctt cgcggccggc acggcggcag gtttcttggc cgctgcgctc ttcggggtcg
     9481 cggcggtttt cttggcgggc ttggtggcca tcaggcgggg tctccggcgt ttcgatcagg
     9541 gtccaggcag gccagcatcg cgtcatgcag ctgctgccgg gcaggttcag tcagggggag
     9601 gtcgtgttcg tcactgatca cgaaagtgtc ttcggcgcgt tcgccgaatg tggcaatgcg
     9661 cgcgtcatgc acgcgcaggc cctggttgcg cagcacgaac gccacgtcgg ccagcaggcc
     9721 gggacggtcg ggggcgacca gggcaaaacg ggtcgcgccg ggctcatcgc ggaactcgat
     9781 gcgcggggca aagcggaaat ggcgcagctg ccgtggcacc acccggcgcg aaggccgcag
     9841 tcgggtcagg tcaccgctga gcgcctcgcg cagcgcagcc tccaggttgg tgctgctgcc
     9901 atcggcgaag gtatcggccg ggttcacctc gaaggtatcg aagatggtgt cggcagggcc
     9961 atccagcacg cgtgcgcggt ggatgccata gcccttgcgg tccagggtca tcacgatggc
    10021 ggcgaacagg ccgtcgcggt ccggcgaatg cacgaacact tccagcgccg ggtcgtcgac
    10081 gctgatccgg cgcaccttca ccagcgcctg gccctgcttc accggcacca gcgcggccgc
    10141 ctgccaggcc agctgctccg gccgcagccg gatgaagcct tcgtcgggca tcaccgcgaa
    10201 ctggcggtcg atggtggcat cgtcgtagcc ctgctcgcgc accagcgcac gcacgctgtc
    10261 acgcgcctcg gccacgcgct cggccgctgg caccgggtgt tccagccctt cgcgcaacgc
    10321 gcgccgggtg gcgaaataga gatcggccag caggcggtcc ttccacgcgt tccacagctt
    10381 cgggctggtg ccggcgatgt cggcacaggt cagcaggtac aggtagtcga ggcggtcgcg
    10441 gctgccgacc agggtggcga agcgatggat caccaccgga tcggcgatgt cctgcttctg
    10501 cgcggtcacc gacatgcgca ggtgctgttc gaccagccat gccaccagct cggtatcggt
    10561 accactcagc gcatgggcct ggcagaacgc gcgcgcgtcc accgcaccca gctccgaatg
    10621 gtcgccgcca cggcccttgg cgatgtcatg gaacaggccg gccagcagca gcagttccgg
    10681 cttgcgcagg cgtggccaca cttcgtgcgc gatcgagaat cgctcgtcgg cacggctgct
    10741 ggcgaacagg ccgatgttgc gcaggaccat cagcgtatgc tggtcgacgg tgtagacatg
    10801 gaacagatcg aactgcatgc gcccactgac ctgggcgaac gcaggaatcc actgcccgag
    10861 cacgcccagc cgcgccatgc gcgaaagcgt gtcgaccggg cgctggccac gcagcaacgc
    10921 caggaactgc tcgcgcgcat cggcgtcggc cacgtcgtag gccggcagca cgggcagcgc
    10981 ttcggccagc gcgcgtgcgg tcagcgaatg caggccgcgc acctgcggat tgttggccca
    11041 gctggcgaac agcgcgaata cctggccgat gttgccgcgc ggccagtcgg catcattggc
    11101 cgccaggtag ccgcgccgca gggagaagcc cacggtcagc ggttccggct gcgcctcgcc
    11161 atcgaactgt tcctcgaagc gctgcagcag gcggtcgctg atccggcgca ccaccagtgc
    11221 ggcgcggtag aagccctgca tcatcttttc gacaccgagg ttctcggcat cgtcttcgaa
    11281 gcccaggcgc gcggccaggg tcttctggta atcgaaacgc agacgctctt ccggacggcg
    11341 cgcgaccagg tgcaggccga agcgcaaccg cgccagcacg gcacgttcgc gcttcaatgc
    11401 cgcggcttcg tcagcgccta gatggccgag cccgaccagc gcctccaggt cacgcacgcc
    11461 gaaggcgcgc agcgccatcc agcccagcgt attgagatcg cgcaggccgc cggggccatc
    11521 cttcaggtcc ggctccaggt tgtcggcggt atcaccgaag cgctggtggc ggttgcgcag
    11581 ttcttccagc ttggccagga agaacgtacg cgccggccac aactcgcgat catcgatggc
    11641 ctcgcgcagg gcgcgacgcg tggcctcttc ggccaggatc gggcgcgcct cgatcagcgc
    11701 ggtcagtacg gtctggtcgg ccgccgcctc gcggcattgc gcagccgagc gcacggcatg
    11761 gctgaccgcc agcccgcaat cccacagcag cgcgaacagg cgcgccagtg ccggctcgtg
    11821 ggccagctgc gccggcggct cgccgaacac cagcaggtcg atgtccgagc gcgggaacag
    11881 ttcaccgcgg ccatagccgc ccaccgcgaa caatgacagg ccactgtcgg ccggcaggca
    11941 gcgctgccag gccaggcgga tcagatggtc ggctgcgcgt gcgcgcagcg ccagcaggcg
    12001 ctcgatgttg tcgccctggt cgaagcggcg gtacaggcgc gcgtcggcct gctgcagcgc
    12061 ctggcgcgcg gcagcagccc agtccgggtc gttgagcgac gcggccggcg tgtccagcag
    12121 cgaactcgcc ggcagcatcc tcaggagacc tgcgactcgc ccggcgacag ggtcagcaca
    12181 tccacgccgg tctcggtgac cgcgatcatg tgctcccact gcgccgacag cttgcggtcc
    12241 ttggtcacca cggtccagcc gtccggcagc accttgttgt agcgggtgcc ctcgttgatc
    12301 atcggctcga tggtgaaggt catgcccggc tgcagcacca ggccctggcc cgggcggccg
    12361 taatgcacca cctgcggttc gtcgtggtag accttgccga tgccgtgacc gcagtactcg
    12421 cgcaccacgc tgaaacgctc gccttcggca tagctctgga tggcatggcc gatgtcgccc
    12481 agggtggcgc ccggacgcac cgcgcggatg ccgcgccaca tggcttcgta ggtggtttcc
    12541 accaggcggc gcgccatcac cgacggcgtg ccgacgaagt acatgcggct ggtatcgccg
    12601 tgccagccgt ccttgatgac ggtgacgtcg atattgacga tgtcgccatc cttgagcacc
    12661 ttcccttcac tggggatgcc gtggcagatg acgttgttga ccgaggtgca cacggtcttg
    12721 gggaagccgc ggtagccaac gttggccgga atggcgccct gcacgttcac gatgtggtcg
    12781 tggcagatgc ggtccagttc ctcggtggtg acaccgggct tgacgtgggg ggtgacgatg
    12841 tcgagcactt cgctggccag gcggccggcg atgcgcatca tctcgatttc ctgcggggtt
    12901 ttcagattca cgctcatggc gcccattatc gctgatccgg ccgcaatctg aacgaacgcc
    12961 acccaactgg cgatccgggc catgcacggt tccggcaagg aaagtgaaag cgtgacgaac
    13021 tccgcccttt cggatcccta tttatcacgg attacagaca cttgcgctgc ctaagctggc
    13081 cccagcgtcg tcaaagcggc accgatcgtg ccgtcttcgc cttgttcaac agaccttcgg
    13141 gtcagggagg ttgtccatgc gatccccagt tcgatccccg ctggcctggg ccatggccgg
    13201 gctcctgatg tccagcccgg tgctggccgc cgacaccacc accttcaacg tcaccctggt
    13261 ggtcaccaag gcctgcacca tcaccgccgc ggcggccacc aacgtggatt tcggcactgc
    13321 cgcctccacc accgccacgc ccaccctggg ccagggcacg gtgaccgcac agtgctcggc
    13381 gctgaccccg tacacgattt cgctgaatgc gggcgccaac gccagtaccg ccaatgacgt
    13441 caccacccgc cggatgaaga acaccaatgc cgcggtgacc gccaacaact atgtcggtta
    13501 ccagctgtac caggatgccg cgcacacgct ggtgtggggg gctaccaccg gcaccaacac
    13561 ccaggccggc atcggcactg gcctggcggt gccctacatt gtttacggcc agatcctgaa
    13621 cctgagcacc aacaacccgg ccaccggtaa ctacctggat acggtcaccg ccacgatcac
    13681 gtattgatgg agcacgcccg catggccgga tcccgcccgt ggcgcgccac cggcgtggcg
    13741 ctgctcgccc tctgcctgct ggcagcctcc acggcaggcg ccaccagcct gcaggtggcc
    13801 cccaccagcc tgcagctgga agcccgccaa cgcgccggcg agctgtggct gaccaacagc
    13861 ggcacctcac cagtgaagct gcaggtgcgt gtgttccgct gggtccagca gaacgggcag
    13921 gaacagctgc tgcccaccga tgaactggtc gccaccccgc cgatgcagga actggcggcc
    13981 ggacagcagc agctggtgcg ggtgatgcgg cccacccgtg agccgccgcc ggcccagcag
    14041 tactaccggc tgatcgtgga cgaggtgccc gacctgtcca cccgcaccga cggcatgcag
    14101 ttcgtgctgc gctattcgat cccggtattc gtgcaaccgg cgtcgggcaa gctggccgca
    14161 cggctgcagg cccggctggt gcggctggac gatggccgcg acggcgtgga ggtgtccaat
    14221 tccggcgaca gctacgcgca gatcgccgac ctcgcgctgg gcagtgccaa gcgcccgcgc
    14281 atcgtgcacc ccggcctgct gggctacgta ctgcccggcc aggtgatgcg ctggccgctc
    14341 gaacgcacgg cgatcgaccg cgacaacgac cagatcacgg ccaagctcaa tggcgagtcg
    14401 gaacagacgc cactgtcgcc accaccggct cgctgaggcg ttgatgggcg cgctgcttgc
    14461 tgccctggct cctgcggcga ccgaagccgc cgatgtgtcc ggcgcagggg ccaccggggc
    14521 tgccgatgta tccggcgtgt ccgccgatgc catcctgccg cctcccaccc cgctcaccgc
    14581 cagccagacg ctgtacctgg acgtatcgct caacagcacg ccacgcggcc tgctgccatt
    14641 caccgacaat cgcggccgcc tgcaggccag tcccgaagtg ctgcgacagc tcggcttcaa
    14701 tgccagcggc gacgcgccgg tgtacctgga ccagatcagc ggcgcggtgg tgcgctatga
    14761 cgcccacatg cagaccctgg cactggacgt accgctggac cagctgaccc tgccgaccac
    14821 cgtgctcagc cgcccgcagg cgcgcgcacc cgctggcagt gcgtcgcccg gcgtgctgtt
    14881 caactacgac gtgtatggca gccgggtgga tacgctcggc aacctcagcc tgagctcgga
    14941 actgcgcctg ttcggcatcg gcaacggcac cttcgagaac accgcgatca gccgtcgcta
    15001 ccagcagcca agcgaccgcc gctggcgcgg cgagagcgtg cgcctggata cgcgctggag
    15061 cctggatttt cccgaccagg caatgaccct ggaggttggc gacttctaca gcggcttcgt
    15121 cgactggacc cggccggtgc gcctgggcgg cctgcagatc ggccgcaact atggcctgca
    15181 gccctatcgc gtgctgaccc ccacccccag tttcctcggc caggcggtgg tgccctccac
    15241 ggtcgagctg tatgtcgatg gcctgcgcca atacagtggc caggtgccgg tcggcccgtt
    15301 ccagctggcc gcgcaacccg gcatcagcgg taccggcagc gcgcaggtgg tggtgaccga
    15361 tgcgttcggc cgcatgcaga cgctggattt cagcttctat ggcacccagc agctgctggc
    15421 caaggggttg tcggactggt cgctgggcgt tggccatctg cgcgaagact tcggccagcg
    15481 ctcgttcgcc tacgacgacc gcacggttgc cagcgccagc tggcgcggcg gcgtcagcga
    15541 tacattcacc ggcgaagcac atgccgaagg cggcggtggc ctggcccagg ccggcctcgg
    15601 cggctggtgg ctgctcggca gtgccggcgt tttcaatgcc gcctacgcgc acagcgacta
    15661 ccacggcctg cagggcgggc aatgggcgct gggctacagc tggaacaacc gccgcctcaa
    15721 cgtcaacctg cgcagcgtgc gcagccacgg cgactaccgc gatctgggcg cgctgcaggg
    15781 caacctgccg ccgagcatca gcgaacaggc cacggtcggc atggatctgc tgcggctggg
    15841 cacgctcagc gccagctacc tgcgcctgcg ctatcccgat ggcgaggaca accgctacgc
    15901 cagcctgttc tggtcgcgca cctggagcca gcgctggtcg gcctacctgt cggtgaacca
    15961 gaacctggac cagagcgacg accgcagcat ctatctgtcg gtcaccgcca gtctcggcaa
    16021 caaccgccag gccagcctgt ccagccagcg caatggcgac agccagagct gggtggccga
    16081 cgtcacccag cccgtgccgg gcgatggcag tgccggcggt gtcggctggc gcgcccaggt
    16141 ccgtcatggc gaagacggca atggtggcct ggccgaggtc ggcatcctca acgatgtcgg
    16201 ccgctactcg ttcggtgcgt cgcgccaggg cggcctcaac tatgcctacg ccagtgccag
    16261 cggcagcctg gtgtggatgg gcgggcacgc cttcgccacc cgcgaggtct ccgacgcgtt
    16321 cgcggtgatc agcaccaacg gcgtcggcgg cgtgccggta cgactggaga accgcctgat
    16381 cggcgtcacc gatgatcgcg gcctgctgct ggtcagcccg ctgctgtcgt ggcagcgcaa
    16441 ccgggtctcg atcgacaccc tcgacctgcc cgaggacatg cgcgccgacc gcatcgagga
    16501 ctgggtgacg ccgcgccagc gcgcgggcac ccgggtcacg ttccagctgc gatcgcggcc
    16561 ctcgctgagc ctgaccctgc tgggcatgga cggccaacca ctggaggtcg gcagcgaagt
    16621 gcagctgccc gatggccgcc aggcgaccgt tggttatgac ggcctgctct acctcgagga
    16681 tgtggccgcc ggcagcatgc tgtacgtcac caccagccgc ggccagtgcc ggctgaaggt
    16741 gccggacctg cccagggtgg tggcgtccgg cgcccggccg cggccggcac cgctgcactg
    16801 catcccggag gtggcgccat gaggatgctg ctgcttggcc tgctgctggt ggccgggctg
    16861 ctggccgcgg caccggcgcg cgccgtcgcg gtctgcacgg ccatcgccga cccgacactg
    16921 ccgttcggca acgtcaacag caatgcgccg ggcgcaacca cgggcacgct caacatcacg
    16981 gtgaactgca ccacctccgc gctgagcctg ctggccacca ccggagtgcg ggtgtgcgtg
    17041 ggcatcggtg ccggcagcgg tggcggcagc agcgccagct ggcggacgat gaagaccggc
    17101 accagtgaca gcatgaattt ccagctctac aacacctcca acttcagcca ggtgaccggc
    17161 ttgaccccgc gcggcacgcc gcccgcgcag gaactgacct tgacctacaa cgtgcccctg
    17221 accggcggca acggcacgca ggccacgcag ctgttcgccc agatcccggc caatcagatc
    17281 ctggcctcgg gcgcgtacag cagtaccttc agcggcgcca gcgtggtcct gacctgggcc
    17341 tggaacgaag tgctgctcgg caccgccacc gtgccggcca cctgcaatgg cggcgccacc
    17401 ggcaccaaca gcgccagcgc cgcgttcagc ttcaccgcca ccgccaacgt gctgccgcag
    17461 tgcggcagct atgtcaccac caacatgaac ttcggcaacg tcaccggcgg cattcccgcc
    17521 aacatcgacc agaccgccac gctgacgctg acctgcctga agaacaccgc ctaccagatc
    17581 agcctgaaca acggccagaa caaccccgcc gccaccagca cgcggcgcat ggccaccacc
    17641 cttggcacag gcacctacta cctcacctat gagctgtacc gcgattcggc gcgcagcctg
    17701 cgctggggca acaccctcaa cgtcgatacc gttggcggca ccggaagtgg cagcgcgcag
    17761 cagctgacca tctatggccg ggtgccgccg gtcaccggcc agccacctgc cggcacctac
    17821 aacgatctgg tgcaggtgac gatcacctat tgacgcgcgt gccgacctgc ggtcggcccc
    17881 caccgggcag atggcgcagt cgagcaagct cgactctaca gttcctgccg atccggccga
    17941 taccgcgcaa cgagtctttc gacacacggg atggcaggtg gttcgcgcat ttctgaccgg
    18001 ggcgatgctg gtcgccagta cgcccgcgtg ggccgagccc agcagcagtg ccgtgcagat
    18061 ccggctgacc gtggtcgagg cctgcagcgg tgataccggc ggcgaccact gcccatcccc
    18121 gcatctgcgc agcgatgcac cgcagctgcc atcccaggtc cgcgaccttg ccccgccggc
    18181 cgacgacgac gacgcagcgc ctgccgtgac cgtcatctac tgatgcgcac actgctgacc
    18241 ctgctggcgc tgctgctggc gtcgccagcc gcggcgctgg acctgctgcc gaccacgctg
    18301 cagctgccag ccgacggcgg ccataccgcg ctgtggctgt acaaccccgg cccgggtcgc
    18361 tggcagggcc aggtgaggat cctggcctgg gagcagcagg cggacaccga gcgactgcgc
    18421 cccagcgacc agatcgtggc cagcccggtc cagctggacc tgccagcagg cgctcgccag
    18481 cgcgtctggc tgctgccgcg cctgccgtct cccgtggcca gcgaacgggc ctaccgggtc
    18541 gtgctcgcgc ccagcgcgcc tggcctgccg cgctactcgc tgcccctgtt ccagggacat
    18601 gccgcgccgc tggcgcagcc gcagctgcgg tccgaggtcg gccccgagcc gtcgcaccct
    18661 accctgcgac tgaccaactc gggtaccctc cacgcccgcc tgcacgacct cgccttcgtt
    18721 gccgacgatg gccggcgcct cgtactgctg cccggcctgg ccggctatgt gctggcgggc
    18781 caggagcgcc actgggcgct gcccgcccat gcccgcggct atgccggcgg ccatttccag
    18841 gcccgcctgc aggacggccg cgtggtcgaa ctgtccacgc cggacccggc aattgcagca
    18901 aacgcaccgg gcgggctata atcgaccgga ttcctgccgc ctgcgtgcgc gggacccgtc
    18961 cacaccggac gtcaccggtg aatccacacc tgctgccccc atccgtgccg gggtgctccg
    19021 cgaggagttc ggccacggag gcaacaggga agcccaaccc cggaaccgat cgcgcttcca
    19081 cgcgtcccgc acacctatcc ccgcgggcgg aatcgctggt tccatatcag gagtattgca
    19141 atgccccagg tcaccatgcg tcagatgctg gaagccggcg tccacttcgg ccaccagacc
    19201 cgctactgga acccgaagat ggctccgtac atcttcggcg cccgcggcaa gatccacatc
    19261 atcaacctgg aaaagaccgt cccgctgttc aacgacgcga tgaacttcat ctcgtcggtg
    19321 gcccagaagc gcggcaccgt cctgttcctg ggcaccaagc gcagcgcccg cgaaaccatc
    19381 aaggaagaag ccgagcgttg cggcatgccg ttcatgaacc agcgttggct gggcggcacc
    19441 ctgaccaact tccgtaccgt caagcagtcg gttgcccgcc tgaaggaact ggaagccggt
    19501 gaaaccgacg gcaccttcga gaagctggtc aagcacgaag tgctgggcct gcgtcgcgag
    19561 cgcgacaagc tggaagcctc gctgggcggc atcaaggaca tgaaccgcct gccggacgcc
    19621 atcttcgtga tcgacatcgg ccacgaagac atcgcgatca aggaagccaa gaagctgggc
    19681 atcccggtca tcgccgtggt cgacaccaac tacaacccgg aactggttga ttacgccatc
    19741 ccgggcaacg acgacgccat ccgcgccgtg cagctgtacg cccgcgctgc ggccgacgcc
    19801 gtgctggaag gcaaggctgc tgctccgcac gccgcctcgg tgcgtgagga agagttcgct
    19861 gaagccgctg ctgaaggcga agacaagccg gcccgccgcg ctccggcgaa gaaggccgcc
    19921 aagaagggcg acgacgccca ggcctgatcc aggccccggg gtggacgccc ggcgtccacc
    19981 ctccctgcgc gcagcccttg gcgcgtgaca ggaccgtgtc acacgggccg gccaccatgc
    20041 cggcccaacc cctttctttc gtgaggtaat cccgtggaaa tcactgcttc cctggtcaag
    20101 gaactgcgcg agcgcaccgg cgccggcatg atggaatgca agaaggcgct caccgaagcc
    20161 aacggcgaca tcaacgccgc tgctgaagcc atgcgcaagt ccggcgctgc caaggccgac
    20221 aagaaggctg accgcgtggc tgccgaaggc cgcctgggcc tggcccagga tggcggcaag
    20281 gccgtgctgg tcgaagtcaa ctcggaaacc gacttcgtcg ccaacgacga caacttcaag
    20341 tccttcgtca acgccgtcgc cgctgctgcc ctggcatcgg gcgccaacga cgtcgaagcc
    20401 gtgaaggctg ccaagctggc cgatggccgc accgttgaag aagcccgcgc caccgccgtg
    20461 cagaccctgg gtgagaacat ccagatccgt cgcatggtga aggtggatgg caacaacacc
    20521 atcggtgcct acgtccacac caacggcaag gtcggcgtgc tggtcgacct ggtcggcggc
    20581 gacgtcgagc tggcccgtgg cctggccatg cacgtggccg cgctgaagcc gccgcacaac
    20641 aaggctgccg atgtgccggc cgagttcgtc gaaaaggaaa aggaaatcga actggcgaag
    20701 atgtccgaga aggacaagtc caagccggcc gacatcctgg aaaagatcat cagcggcaag
    20761 atcaacaaga tcgtcagcga cgtgaccctg tacggccaga cctacgtgct gggcgacacc
    20821 accgtcgagc aggtggtcaa ggccgccggc gccgacgtgg cgggcttcaa gctgctgatc
    20881 gtgggcgaag gcatcgagaa ggtggtggaa gactacgccg ccgaagtcgc caaggcgatg
    20941 caggtctgat tccagccctc cggctgtgaa gcgaccagaa gagccgcggg aaaccgcggc
    21001 tcttttttta tgcccactgc acccgtggga gcgcaccgtt ggtgcgcaca ccgacaccgg
    21061 cgcccaggga cctttgcgtt gcgcaccaat caagccgata ctcggcgcag ggaaaccgca
    21121 gtcatttagc aggaacgaaa attgcggact gtgatgcatt cctaggtatt cttgtcccaa
    21181 tggaattgaa cgacccgaca tgcctcccga gctgacagct gccctggcgc tctgccgcaa
    21241 cctgccttcg ccacccggta ttgccctgcg catcatcgaa ctggcccagg acccggaagc
    21301 ggacatcgcc accgccgccg acatcatcgc catcgacatg gcgttgagcg ctcgcatgct
    21361 gcgcatcgcc aattcccccc tgtacgccag ccggcgccgg atcgagaacc tcggccaggc
    21421 gctgaccatg ctcggcctga acgccacgat cagcctggcc ctcggcttca ccgtcaccca
    21481 gggcctgacc ggcggcagtg gcgagggcca cgacctgcgc cagcgcgcct ggaagcgcag
    21541 catcctcagc gccctggccg ccagccagct gggacaggcc cgcggcctgc gccgcctgga
    21601 ggaactgatg ctggccggcc tgctgcagga cctgggcgtg ctgtgcctgg cccaggccga
    21661 atcggaacgc tatctgcccc tgctgcgcga agcgcgcgac aacaccgacc tggtcgcgcg
    21721 cgagcgcgag gaactgggct gcagccatgc cgacgtcggc gcctgggtgg ccgagcaatg
    21781 gggcctgccg cgctatctgg tggagagcat cagccacagc gaggaccagg acgcggtcga
    21841 atcgcccttc caggcctgcg tgcaactgtc cggcgccgtc gccgacatct ggctggacga
    21901 ggatgccgac accgcccgcg aacgcgccct gcagcaggtg cacgaccagc tggaactgga
    21961 cagcgcccgc ttcgaccagg tgctcgcccg catcagcgag gccctgccgg acatcgccag
    22021 cctgttcgag gctggactga actcgccctc gcgtgtgcgt gaactgatcg accacgcaca
    22081 ggagctggcc accctgcgca acctgcgcga actgcaggat gccgaccagg cgcgccgccg
    22141 cgccgacgaa ttcgaagccc gggccaagcg cctggccgac caggcccacc gcgacgcgct
    22201 gaccggcgtg ctcaaccgcc gccagctgga agcggtgctc gagcaggagt tcctgcgtgc
    22261 cggccgccag ggctggccgc tgtcggtggc gttcatcgac ctggacgatt tcaagaagat
    22321 caacgacgcg catggccacc tgaccggtga tgaggtgctg cgcgccttcg ccggcaagct
    22381 gcagggccaa ctgcgcaaca gcgacaccgt ggcccgtttc ggtggcgagg aattcgtcgc
    22441 actgctgccc aataccagcg aaaccgtggc actggacgtg atccgccggg tgctggccaa
    22501 catcgtcgcc accccgatgg ccgagctgga aggcggcccg ctgttcgtca ccttctcggc
    22561 cggcgtggcc acccagggcg gctacgagcg cttcgccgac gtgcaggacc tgctgcgcgc
    22621 ggcggacgac gtcctgtacc gatccaagaa tctcggccgc aaccgggtga tcgcccgctc
    22681 ccctggcgct cttggccacg acgagctgtc ggcgaccgct ggcgccgagc tgggctgaac
    22741 ggggagcccc ggctggccgg ggcaaacgcc ggaattttgc gccgcagtgc acaaaacact
    22801 ttggcaggac gctgcatgcg cgtagaatcg cccgcgattt ccacgcaccc gaggtcccca
    22861 tgtccaagct cgcctatcgc cgcatccttc tgaaactgtc cggggaggcg ctgatgggag
    22921 atgaggacta cggcatcgac ccgaagatca tcaaccgcct ggcccgcgag gtcatcgaag
    22981 cccagcaggc cggtgccgaa gtggccctgg tgatcggcgg cggcaacatc ttccgcggtg
    23041 ccggcctggc cgctggcggc atggaccggg tcaccggcga ccagatgggc atgctggcca
    23101 cggtcatcaa cgccctggcc atgcaggacg ccctcgagaa gctgggcgcc aaggcccgcg
    23161 tgatgagcgc gatcaagatc aacgacgtgt gcgaggacta catccgccgc cgcgccatcc
    23221 gccacctgga aaagggccgc ctggtgatct tcgccgccgg cgtcggcagc ccgttcttca
    23281 ccaccgattc cggcgccgcc ctgcgcgcga tcgagatcgg cgccgacctg ctgctgaagg
    23341 ccaccaaggt cgacggcgtg tacgacaagg acccgaacaa gcacagcgac gcggtgcgct
    23401 tcgacagcct gagctacgac gaagtgatcc gccgcggcct ggaagtgatg gataccgccg
    23461 ccttcgccct ggcccgtgac agcgacctgc cgatgcgcgt gttcgacatg ggccagccgg
    23521 gcgagctgct gaagatcctc aacggcgaga acatcggcac cctggtccag ggccgcgatc
    23581 aggcctgagc ctgagcgcga ggcgacaacc gggccgatcc aggcccggca gcgtcccgta
    23641 ttcgcctata atcgcccgat tccagataca tccaggaccg ggcgatgctc aacgacatca
    23701 agaacaacgc gcagacgcgc atggccaaga gcatcgacgc tctgaagcac accctcacct
    23761 ccatccgcac cgggcgtgcc actcccgccc tgctggaccg cgtgacggtg aatgcctatg
    23821 gcaacgccag caccccgctg aaccaggtcg cctcgatctc caacgccgat gcccactcgc
    23881 tgctggtcac gcccttcgac aagagcatga tcaaggaaat cgagaagggg ctgtacaacc
    23941 acgagttcac cccgaacacg ctgggcgccg cgatccgcat caacatgccg ccgccgaccg
    24001 aagagcgccg caaggagctg gccaagcaag tgcagaagga aggtgaaggc gccaagatcg
    24061 cgatccgcaa catccgtcag gacgcgaaca aggaaatcgc caagctggtc aaggacaagg
    24121 cgatcagcga agacgagaag aagcgcggcg aagacgacat ccagaagctg accgacgcca
    24181 acatcaagga cgtcgacaag gtcgtcgccg acaaggaaaa agaactgctg tcggtctgaa
    24241 gtcgatgcct tcagtcccgc ctccgttgcc ggctgccctg ccccgccacg ttgccatcat
    24301 catggatggc aacggccgtt gggcgcagca gcgccgccgc ccgcgcgtga tcggccaccg
    24361 tgccggcgcg cgcgcggtca accgcaccat cgagcgctgc cttgaactgg gcattcccgc
    24421 gctgaccctg ttcgcgttct ccagcgagaa ctggggccgg ccgcaggaag aagtcgatgc
    24481 gttgatgaag ctgttcctcg gcgcgctcga ccgcgaagtg gacgagctgc atcggcgtgg
    24541 cgtgcgcgtg cgcttcattg gcgaacgcga gcgcttcggt gccggcctgg tcagccgcat
    24601 gcagctggcc gagcagcgca ccgctgacaa caccaccctg accctgtcga tcgccgccag
    24661 ctacggtggc cgccaggata tcgcccgtgc cgcgcgcgcc ctggccgtgg aagtggctgc
    24721 gggccgcctg ctgcccgaac agatcgacga atcgctgctg ggcggccagg tggccctggc
    24781 cgacctgccg gccccggacc tgttcatccg caccggcggc gatacccgca tcagcaattt
    24841 cctgctgtgg cagctggcgt acaccgagct gtggttcacc gaggccctgt ggccggactt
    24901 cgatgccgaa ctgctgcagc aggcgctgga cgcctatgcc agccgcgagc gtcgtttcgg
    24961 tctgaccagc gcccagatcg ccgcactggc caccgagacc tccagcccat gaccaagacc
    25021 cgagtactcg ccgcgctgat catggcgccg gtggccattg ccgcgatcct gctgctgccg
    25081 acgcaatggc tggccgccgc cgctgccgcc gtgctgctga tcggcctgtg ggagtggctg
    25141 aagctggccg gcatcgaaga caccctggcg cgcaccgtgc tgctggtgct gaacctgctg
    25201 ctgatggtgc tgctggtgtg ggccgatggc agcacgctgg tgctgttcca gatcacgaca
    25261 ctagccggtg tcgcctggtg gctggccgcg ctggtctggc tgcgcttctt caacttcggc
    25321 gcacagccga cggcgccctc gcggatcgtg aagatgctgg ccggcaccct ggccatcgtg
    25381 ccggcctggg ccgcactggt gctgatccat gccggcggcg atccgccggg caagcagggc
    25441 cacctgtggc tgctggccgc gctggccctg gtctgggcag ccgattcggg cgcctatttc
    25501 gccggccgac acttcggcaa gcacaagctg gccccgcgca tcagccccaa caagacctgg
    25561 gaaggcctgt tcggcggcct gctggccggt gttgccgtgg ccgtgggcct gggctgggtg
    25621 gcgggcatcg acgtcgcgca cctgccgggc ctgctgatca cctcggtggt ggcggtgttc
    25681 gcgtcggtgc tgggcgatct gttcgaaagc ctgatcaagc gccacgccgg tgccaaggac
    25741 tcgggccacc tgattccggg ccatggcggc gtgctcgacc gtgtcgacgg cgtcctcgcc
    25801 gccgttccgg tgttcgcgct gggcaaggaa atcttcgggt tctgaccatg aatgctgctg
    25861 cagacctgcg ccgggtcacc gttctcggcg ccaccggctc gatcggtgcc tccacgctgg
    25921 acgtgatcgc ccgccacccg cagcgctacc gggcgaccgt gctggctgcc ggccgccagc
    25981 tgcaggcctt gctggcactg tgccgccagc acgaacccga gcacgcggtg atcgctgacg
    26041 agtcgctgtt cgccgggctg cgcgatggcc tgcgcgaggc tgggctgtcc accgaggccc
    26101 atgcgggtgc cgccgcactg gaccagctgg ccgccagcga tgcctgcgac accgtggtcg
    26161 cggccatcgt cggcgccgcc gggctgtcct cgaccctggc cgccgcagcg gccggcaagc
    26221 gcatcctgct ggccaacaag gagtcgctgg tgctggccgg cgagctgctg acccgcaccg
    26281 ccgaacgtgc cggcgccgaa atcatcccga tcgacagcga acacagcgcg atcttccagt
    26341 gcctgcgctc gcgcgatgcc agcatcgatg gcgccggcgt acgccggatc ctgctgaccg
    26401 cctccggcgg cccgttccgt ggccgcagcc gtgccgagct ggcccaggtc accccggcgc
    26461 aggccgtggc acacccgaag tggtcgatgg ggccgaagat ctcggtcgat tcggcgacgt
    26521 tgatgaacaa gggcctggaa gtcatcgagg cgcatcacct gttcgcggtg cccggcgagc
    26581 gcatcgaggt gctggtgcat ccgcagagcc tggtgcattc gctggtcgag ttcgtggacg
    26641 gctcaaccct ggcgcagatg ggcctgccgg acatgcgcac cacgcttgcg gtcggcctcg
    26701 gctggccgca gcgcatcgag tctggcgtgg ccgggctgga tctgctggcc cagggccggc
    26761 tggatttcga ggccccggac accgacgcgt tcccctgcct ggccctggcc tggcaggcga
    26821 tgcaggcggg cggaaccgca ccggcggtgc tgaacgctgc caatgaagag gcggtttcag
    26881 cgtttcttca gggccggatc ggtttcctga ccatcccgga gctggttgct aacgctcttt
    26941 caacactgcc gacccaagca gccgatacac tggaggtcct gttgtccgcc gaccagcggg
    27001 cacgccagct gaccctgaac gccatcgacg ccgcctgaac gattgcctcg ccccgcatga
    27061 cgacgccgcc tctgcccgcc actgtgagcc tgcatgactg acttcatcgg atcggtctgg
    27121 tggatgattg tcagcctcgg gctgctggtc acgttccacg aattcgggca ttactgggtc
    27181 ggccgcctgt gcggggtcaa gatcctgcgc ttctcggtcg gctttggccg cccgctgtgg
    27241 tcacgccgcg acaggcacgg caccgaattc gccatcgccg ccattccgct gggcggctac
    27301 gtgaaattcc tcgacgaacg tgaggtcgaa gtccatccgc acgagcgcgg ccaggccttc
    27361 aaccacaaga ccgtctggca gcgcatcgcg attgtcgccg ccggcccgat cgccaacctg
    27421 ctgctgtgca tcctgctgct gtgggcgatg ttcgtgatcg gcaagcagga ttattcgccg
    27481 accatcggcc gggtcagcgg catcgccgcc acggccgggc tgctcagcgg cgaccgcgtg
    27541 ctgcgggtgg atgaccgcca ggtggtcacg ctcggcgatg ccagcatggc actgaccgcg
    27601 gcggcgatgg accgccgcga cgtgaagctg gaagtgctcg accctgccga ccaggtgcgc
    27661 gtgcgtaccc tgccgctgtc gcagctgccg accggattcg atgaacggcg ggtgccgatc
    27721 ctggccggcc tgtactggca atcctggctg cagccggcgc tggtcgactc gttgaccgcc
    27781 gattcggcgg tcgccgggca gctgcagccg ggtgatctga tcgtggcgat cgatggccag
    27841 cgcatcgaca gcgtcgacca ggtcatcggc gaaatccagg ccctgggccg cgccggtggc
    27901 ccgggcatga tcgaggtcct gcgcggcggc gaacgccttg cgctggaagt gacaccgcga
    27961 cagggcaagg atggcaaggg caacccggtc tggcagatcg gcgtcggttt ccccaccacc
    28021 tacagccccg cctacgacac cctgctgcgc tatggaccgc tcgacgcggt gaccgtggcc
    28081 gttcgcgaaa ccggccgcct ggccgccgac tcgctgggca tgatgggtcg catcgtcacc
    28141 ggcaaagcct cgctgcagaa cgtttccggg ccggtcacca ttgcccgcgt ggccaatgtc
    28201 tcggccaagc gcggcctcga ctggttcctg cagttccttg ccctgctgtc gctcagcctg
    28261 tgcatcatca acctgctgcc gatcccgatc ttggacggcg ggcacctgct gtattacctt
    28321 atcgagttgg tcaagggcag cccgctgagc gagcgtgcca tcgccgccgg ccaatacatc
    28381 ggtctggcgt tgctggccgg gctgatgggg ttggcgttct acaacgacat cctcggcctg
    28441 gtcccgcgat gaacttttcc acgttgttgc cgtctacagc gtcggcatcc cgcaccaatg
    28501 aaatcgacct tcctaccgga cgtgacatga cgcgactccc caatcgccgc ctgctggccc
    28561 tcgccctcgc cgccgtcacc ggcgctcccg ccctggccca ggcagccgag cccttcactg
    28621 tcagcgacat ccgcgtcgat ggcctgcagc gcatcagctc gggcacggtg ttcacctacc
    28681 tgccggtgga acgtggcgag accatcaccg acaacaaggt cggcgagacg atccgcgccc
    28741 tgtacaagac cggcttcttc gaagacgtcc agctggatcg ccagggcagc atcctggtgg
    28801 tcaccgtcaa ggaacgcccg gcaatcaaca agctgaccgt caccggcaac aaggacatca
    28861 agtccgagca gctgctgaag ggcctgtccg acatcggcct gaccgaaggc ggcaccttcg
    28921 accgcctgag cctggaccgc gtgacccagg aacttcgccg ccagtacaac gaccgtggca
    28981 agtacaccgt cgagatcacc ccgaccgtga gcccgctgga ccgcaaccgc gtggacatcg
    29041 cgatcgccat caaggaaggc aaggcggcca agatccgtca cgtcaacctg gtcggtaccg
    29101 agaagttcga gagcaaggac atcctggaga cctgggagtc cagggagcac aactgggcgt
    29161 cgtggtaccg ccgtgacgac cagtactcca aggaaaagct gtccggcgac ctggaaaagc
    29221 tcaactcctg gtacctggac cgcggctatg tcgacttcag catcgattcc acccaggtct
    29281 cgatcagccc cgacaagcgc gacatgttcc tcaccgccgg cgtgaccgag ggtgcgcagt
    29341 acaagatctc cgagatcaag gtcagcggcg acaccatcct cccgcaggag gacgtcgagc
    29401 gcatggtgat ccagaagtcc ggcgacacgt tctcgcgtgc actgctggag ttcagctcgg
    29461 acaccatcac caattcgctg tccaacatcg gctacgcgtt cgccaaggtg aacccgatcc
    29521 cgaccaccaa ccgccccgac cagaccgtgg cgatcaacat gcaggtcgtg ccgggcccgc
    29581 gcgtgtcggt gcgccgcatc ctgttccgtg gcaacacccg cacctccgac gaagtgatgc
    29641 gtcgcgaaat gcgccagttc gagaacagct ggtactcgca ggccgcgatc gaccgttcca
    29701 agatccgcct gcagcgcctg ggctacttcg agtcggtgga cgtcgaaacc ccggccgtca
    29761 gcggcagcaa cgaccaggtc gacgtcgtct acaacgtcaa ggaaaccacc tccggcagct
    29821 tcgtgttcgg cctgggctac tcgcagtcct acggcatgac cacctcggtg cagctgtcgc
    29881 agaacaactt cctcggcggc ggcaaccgcg tgtcggtcga agcctcgcgc agcagctacc
    29941 tgcagcgcta tggcttcagc tacaccaatc cgtacttcac cgatgacggc gtgtcgctgg
    30001 gctacaacct gtcctggcgc gaactggact actccgactt caacaccgcg cagtacaaca
    30061 gcaccaatgg ttcggcacag gtggtgttcg gcgtgccgat caccgagacc gataccgtct
    30121 cgctgatgtt cggcatcgac agcaaccaga tcaccaccta cccgggctcg accccgccat
    30181 cgatcatcga ttacatcgat gcggtcggca cccgtacctt ccacgcgtgg cgcacggagc
    30241 tgggctgggc ccgcgactcc cgtaacgact acttcatgcc gacccgcggc acctaccagc
    30301 gcatcggcct ggaaaccacg ctgccgggct cgaccatcga gtactacaag ctgaactatc
    30361 agatcagcaa gtactggccg atcatgccgt cgctggtgat caacacccgc gccgaagtgg
    30421 gctacggcga cgcctacggc aaggactaca cccgtacggt caccgatgcc gacggcaaga
    30481 cccgcaccgt caccgccagt ggcctgccgt tcttcgagaa cttctatgcc ggtggtacca
    30541 actcggtgcg cggcttcgag gacaacaccc tcggcccgcg cgaggccacc aacggctatc
    30601 cggagggcca gccgctgggt ggttcgctga agaccgtcgg ttcggtcgaa gcgtacttcc
    30661 cgcgcctgtt cgacagcccg tcggcgcgcg tgtcggcctt cgtcgacttc ggcaacgtct
    30721 acaacggcac caagaacttc aaggccaacg aactgcgcgt gtccaccggt gtggccctgc
    30781 tgtggcgcgc cccggtcggt ccgatctcga tcagctacgc cttcccgctg aagaaggaag
    30841 acgacgacaa gatcgaacgc ctgcaattca ccttcggtgg ccagttctga ggaacgtcgt
    30901 tcctcagaac tgatccacct gcggtgaatt gcccccgcat ttcacctatc ccccgcgccg
    30961 tcggcgcgcc ccccttaaca aaggggggct ctccaccaga cggggtgcga agcgccgggc
    31021 cctgcccggc gttttcgttt ggtccggatg ccggaagcgc ccgctctgct tttgagcttt
    31081 gatcttttct gtttttccgt ggctggcaca cgcgccacgc cgccggaggt cggacggggt
    31141 ggggctgcgg gggtgtgagc cgcat
//
LOCUS       DAOKIP010000027        30663 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.027,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000027 DAOKIP010000000
VERSION     DAOKIP010000027.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 30663)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 30663)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..30663
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.027"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(33..494)
                     /locus_tag="QEL58_001106"
     CDS             complement(33..494)
                     /locus_tag="QEL58_001106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014035507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="META domain-containing protein"
                     /protein_id="HDS1675604.1"
                     /translation="MKHVPILIIAVLLGMSADAAVASTPSNDRLEAHLWQLVRATDAQ
                     GRRIDALFVPGHAPYTLRFRSGFMSELNLCNHASSQYQLQGNHLNLRNGVQTTAECID
                     PKMTTQQKRARMLMHGGGSAPMLELGERGTLTVRNAQGDTAVFEPASLPEE"
     gene            complement(624..1451)
                     /locus_tag="QEL58_001107"
     CDS             complement(624..1451)
                     /locus_tag="QEL58_001107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="META and DUF4377 domain-containing protein"
                     /protein_id="HDS1675605.1"
                     /translation="MNRKLTLLLPLALMAACSQTPAPAGTGGDDVAPAAAKAADQQTL
                     AHLDAQRLQSQHWLLQQATGADGKRIDALFAREDKPVTLDFADGRLSVSNACNHMGGS
                     YSLADGKLTVGAMASTMMACTDKALMALDEAVSSRLQGELKAEQDADGKLTLTTAKGD
                     VLVFNPEPTAETRYGGAGETVFLEVAAKTEKCSHPLIPDYQCLQVREVKFDDKGLKQG
                     EPGKFENFYGNIEGYTHEDGVRNVVRVKRYEVKNPPADAPSQAYVLDMVVESAVEKK"
     gene            complement(1525..2319)
                     /locus_tag="QEL58_001108"
     CDS             complement(1525..2319)
                     /locus_tag="QEL58_001108"
                     /EC_number="3.6.1.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010487209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-diphosphate phosphatase"
                     /protein_id="HDS1675606.1"
                     /translation="MSDLLSALLLGILEGLTEFLPISSTGHLLIAQHWLGARSDFFNI
                     VIQAGAIVAVVLVFRQRLLQLATGFNQRENRDYVFKLGAAFLVTAVVGLVVRKAGWSL
                     PETVSPVAWALIIGGVWMLLVEAYTARLPDRDQVTWTVAIGVGLAQVVAGVFPGTSRS
                     ASAIFLAMLLGLSRRAAAAEFVFLVGIPTMFAASAYTFLEMAKDGKLGSENWTDVGVA
                     FLAAAVTGFVVVKWLMGYIKSHRFTAFAIYRIALGAALLLWLPSGS"
     gene            2543..3952
                     /gene="glnA"
                     /locus_tag="QEL58_001109"
     CDS             2543..3952
                     /gene="glnA"
                     /locus_tag="QEL58_001109"
                     /EC_number="6.3.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017157345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I glutamate--ammonia ligase"
                     /protein_id="HDS1675607.1"
                     /translation="MSVENVEKLIKDNQIEFVDLRFVDMRGVEQHVTFPVSIVEPSLF
                     EEGKMFDGSSIAGWKGIAESDMVLLPDTASAYVDPFYADPTIVISCDILDPATMQPYG
                     RCPRGIAKRAEAYLKSSGIAETAFFGPEPEFFIFDSVRFANEMGHTFFQVDSEEAAWN
                     SGAKYDGANSGYRPGVKGGYFPVPPTDTLHDLRAEMCKTLEQVGIEVEVQHHEVATAG
                     QCEIGTKFSTLVQKADELLRMKYVIKNVAHRNGKTVTFMPKPIVGDNGSGMHVHQSLS
                     KGGTNLFSGDGYGGLSQLALWYIGGIFKHAKAINAFANSGTNSYKRLVPGYEAPVMLA
                     YSARNRSASCRIPWVSNPKARRIEMRFPDPIQSGYLTFTALMMAGLDGIKNQIDPGAP
                     SDKDLYDLPPEEEKLIPQVCSSLDQALEALDKDREFLKAGGVMSDDFIDGYIALKMQE
                     VTKFRAATHPLEYQLYYAS"
     gene            4276..4614
                     /locus_tag="QEL58_001110"
     CDS             4276..4614
                     /locus_tag="QEL58_001110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_004997399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-II family nitrogen regulator"
                     /protein_id="HDS1675608.1"
                     /translation="MKLISAIIRPFKLDEVREALSDAGVSGITVTEVKGFGRQKGHTE
                     LYRGAEYVVDFLPKIKIETVVTDERADAVIEAIQSSAGTGKIGDGKIFVTAVEQVIRI
                     RTGEIGADAL"
     gene            4637..6067
                     /gene="amt"
                     /locus_tag="QEL58_001111"
     CDS             4637..6067
                     /gene="amt"
                     /locus_tag="QEL58_001111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004134339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ammonium transporter"
                     /protein_id="HDS1675609.1"
                     /translation="MKMRLLTGWQARFHIVCLLMLLSALAAGAWPGSAHAQAQVSPLP
                     SESVAVEALQDPAAAAAAPAVAEVAAAYDRGDVAWMLTSTLLVLLMVVPGLALFYGGL
                     VRSKNVLSVLSQILVVFSLVLLLWVAYGYSAVFSAGNPFFGSFTEFAFLKGFTPDSVG
                     NTPIKGLPDYLFVAFQSTFAGITTALIVGAFAERIKFRAVLLFSALWFTLSYIPMAHI
                     VWGGGYLGELGAIDFAGGTVVHINAGVAGLVAAWFVGKRLGYGQTALKPHNVPFTYIG
                     AMLLWVGWFGFNAGSAAAADTVASLAFLNTVLATAAAVLGWTLVEAIGKGKPSALGAA
                     SGAVAGLVGITPACGTVGPLGAIVIGFVAGVVCVWGVTGLKRLLKVDDTADVFGVHGV
                     GGIVGAILTGVFSAQSLGGTKADLDIAHQVWVQVVSVGLTVLWSAVVTTLILLVVRSV
                     VGLRVTEEAERTGLDVTSHGESAYEA"
     gene            6354..8078
                     /locus_tag="QEL58_001112"
     CDS             6354..8078
                     /locus_tag="QEL58_001112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012509683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ShlB/FhaC/HecB family hemolysin
                     secretion/activation protein"
                     /protein_id="HDS1675610.1"
                     /translation="MEQGRYVRSRTLRWRLSVGVVLAIAGVQAPAWAQAVSPEQELLR
                     QQERERALREQQESTPDVRLQPSTEDLGRLPADESPCFTIHTIALQGDLADRFRWALA
                     AADPRSDPATGRCLGTAGVDMVMKRVQNAIIERGYVTTRILAAPQDLKTGVLTLTVVP
                     GRVNAIRFAAGEGRPPALWNTMPVARGDVLNLRDIEQALENLQRVPTASVDIQIAPPA
                     DGAAAKPGESDLLISWKQVRPVRVNFTLDDAGSQSTGKMQAGATVSVDNPAGLSDLFY
                     VNVGRSAFNGSERSTDSWSAHYSVPLGAWLLGANASSYDYEQTVAGAFENYVYSGSSR
                     NAELRLARMLFRNAHAKTSMYARGWYRESDNFINDTEIEVQRRRMAGWELGLGHRHFI
                     GKATLDVNLAYRKGTGAFNALRAPEEAFGEGTAHGRIYTADAQLVVPMQWGRQSLRYT
                     GSWRAQWNRSPLVPQDRFSIGGRYTVRGFDGEMSLTGERGWLLRNELGAALGGGVEAY
                     VAIDHGRVAGPSTARLLGDRLTGTALGLRGGTRHINWDAFVGSPLSKPRGFQTAYTTF
                     GMNLGVSF"
     gene            8185..23610
                     /locus_tag="QEL58_001113"
     CDS             8185..23610
                     /locus_tag="QEL58_001113"
                     /inference="COORDINATES: protein
                     motif:HMM:NF017412.1,HMM:NF017658.1,HMM:NF024418.1,
                     HMM:TIGR01731.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005408642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemagglutinin repeat-containing protein"
                     /protein_id="HDS1675611.1"
                     /translation="MNKVYRLVFNRTLGVMQVASELVSAAQGGVDHRGGRTVGTLQPI
                     SFALWLVLGWVGLVQPLSAQQAPTDPGRIAADPGAPANQRPTVVTSANGTPQVNITTP
                     SAGGVSRNTYQQFDVGQQGVILNNSRGDVQTQLGGWVQGNPWLATGTARVILNEVNSS
                     NPSHLNGYVEVAGARAQVVIANPAGIQVNGAGFLNASRVTLTTGTPIVSNGVLEGYRV
                     EGGSIGVGGAGLDTSRADYTDIITRSLQVNAGIWANQLQASLGSNVVSADHSSVQVQP
                     AATAAPVFALDVGALGGMYANRIWLVGNEHGVGVRNAGRIGAQAGELVVTADGRLQNI
                     GAMHAQQDLRIDASGGIANAGTLSAERELRLQTPQDVDNSGGTLNARRIEVNADALRN
                     RSGSIEQLGAQVLQLQATDLSNLQGRIGNVPSTSPGTGNGDGSGTTPGTGTPGTGTPG
                     SGTPGTGTPGTGTPGTGGTAPVTPPLATGLLNIAGTLDNDGGRIEATGDLQLSARNSL
                     DNSDGTLGASTLQVQGQALRNARGTLQVQGAASAQVLQLDNSSGRMTFARGFELQAQS
                     VSNRGGSLAHGGNAETNWTIGRLDNSEGSISSNATRLGLDIGTAINTRGSINHAGSDG
                     LLLRAQVLEGTQGSIATGGAANLLLGRADHRGAQLVARQLELTAQDFDNRGGRVLSTG
                     QQASALNVRDHLDNSDGGLLASNADLQIDAASFGNAAGTVQQAGTGNLRITTANLQGP
                     GGTVLSNGTLQLHGDTLNLRNGTTAAQRLDVRAGDLTTAGGMLTSTGSDALRLQVSRT
                     LDNSGGTVGANGALDINGGILINDGGKLIAAGTGTSRIHARQQMQNQRGLLSANGDLE
                     INADGLLNEGGSIDHAGTGTLQIDATTLQGAGGSIASNGQLQLSGQQLDLQKGSTRAR
                     DVKITATGLDTSGGSLLALGNNAMQLQVQGLLRNDGGSISANGAQQIQAGTLSNRGGA
                     LTSAGTAASQIRVDGTLDNSSGSIASNAGNLQLKSGALVNANGTLSHAGSAGLVIDTG
                     RLDGAKGQIATAGALQLTAAEVDHQGASLAAAQLDITATGLDNRGGRIIATGTGGNTL
                     RVQGALDNGNGGTLASNGNLDIHARTFGNAGGTVQQAGSGSLAITTQDLAGAGGTLLS
                     NGSLDLQGDTLDLRDGTTTAQRISIDGDSVITAGGKLSALGTQALQLQARSLLDNTGG
                     TLGSNGAINVRAGRFANDHGTLIAAGEAASAIRAAQLENRSGSISANGNLHIEAEVLS
                     GQGGSIGAARALALQGGSLDLRGGSVAAEQLDIVADSLDNSAGALRATGSGTLALQVS
                     GRLANDAGTIASNGAQRIEAGELSNRGGTLSSAGSATTELQVAGLFDNSNGVLASNGA
                     ALKIDAGHMANVKGTLSHAGTQGLLLRTGQLDGQGGSIASAGGITLQAGSVDHRGATL
                     QAVRIALDVQSFDNRAGKVIATGAEGSTIDVVGTLDNGEGGLLASNGNLGIQAAVFGN
                     AGGTVQHAGEGVLSIDAGTLNGTGGTLVSNGSLLLKGTTTDLRAGVTSSKRIEIDTGS
                     LITAGGTLTATGNDMLRLSARERVDNSGGTVSSNGGLELRSVALVNAGGTLQSAGAAA
                     SQLIIGQDINNRGGRILANGGLGISSGGIDNQGGTLHSAARLVVKADGLLDNSNKGVI
                     ASGAGMQVAAAALDNRSGSIEQAGDGLLQIDAITLQGHGGRIVSNGELQLKGETLDLS
                     AGTTAAQQVSIEAGQLDNTGGTLNATGNQAMSLQVRGALGNDGGTLAANGAQQISAGS
                     LSNVGGTLSSAGTSDTRINVTGRFDNSRGTLASNAGNLRLDAVQLLNVAGSIVHAGKG
                     VLKVQATQLEGAGGSIATAGALQLDAVTVDHRGATLNADHFTVNADRFDNQNGKLLAT
                     GTQASTVQATTSLDNGGNGLIASNGDLTLTSALFGNAGGTVQQAGTGTLAINAHTLNG
                     QGGKLLSNGALQLTGETTDLRDGTLAAARIAVDTGTLLNAGGSIIASGTDTLKVSARD
                     RLDNSGGTLAGNGSLDLRSTQLLNNLGTIQAAGSGSSTLAITHALENRGGRILTTGDA
                     GLRAGALDNRGGTVHSDGNSALTVRVDGLLDNSDKGTLSAGGALLAEAQAINNSGGTV
                     AAGQDLRLTSTDLLRNGGGLIQAGKHLQVSAGGLNNNSGRIIANDLQLDTRGQVLDNR
                     SGIIASLSGDAALRSGALDNTGGLLQSAAALSIDTSGQRLTNAASNGNGIVSSGTLQI
                     RSGDLDNRGGSVFAKAGADVQAINIDNGGGGSLVSAADLLLRAQQLANSGGNVTAGGS
                     ADIGLQGALLNSGGLLAATGRLDLQAGYIDNRNTLSQGNGPALGLQGRNLRVTTGNLD
                     NQNGQLLADDLQLQVNQRLDNSGGQISAALTSDVRADTLVNSGGTLVAGRQQTLRTRE
                     IVGDGRLMSQGDMTLELGQSHTNRGEMVANGTLSLSVQGNLDNAGKLAGANVSIHAGN
                     ITNATTGEISSIGLTRLDAGSALVNYGLLDGNVTHITAGSVDNIGSGRIYGDRVAVQA
                     GALNNVAANIGGVDRAGTIAARQRLDLGVGTLTNSGRSLIFSDGDAAIGGALNGLGAV
                     GSAQKVDNLGSTIEISGNLDLSALAVNNIRDNVVVEKVTTVHAPVRLEQPGWFKNATN
                     NNRDFRATSNYQPYEIYYLNPADILEDTPYVTPDGQQIRKAVIRLTSNTSAYAFARGG
                     VHGARASRERLNVQDGTVTIYYFARADNRNNPDQLGAGAEDPFRDLSTRGAGAPPMEY
                     VTDTLNYNAAYGTCTTTCVQIITYPDYDNPESTLINMQRHPQETSGNEKTRIATRTTV
                     EDVVVSAGDNAVINAGGNMRISTDRLENRFANIAAGRDLAIVGLNRDQSEVINAAEQL
                     TRTSTFDNVSITYGGSSSRWKAAPITEKTGALGSAITAGGKLTIDVGNLRNDNTGGNN
                     PNAGGGKGTAQLDTAGHGAGSVGPGAGSVQGPGQSVGQGAGSVDAQGPGTAGAAQGAS
                     GSQQQAVAKAEGTRADTAGAQGPGQAGNAGAGAGTAQDISAAQAGQTNANGPAAVRTG
                     EHAGSGGNGAVDGKQATTAKGSDPRVVVTTSPNASAPTASLFNVDANRGNHIVETDPR
                     FASYRDWLSSDYLLQRAGFEPSQTQKRLGDGFYEQKLVREQIGELTGRRFLTGHASDE
                     DQYRALLEAGATVASEWGLRPGVGLTAEQMARLTSDIVWLVEKDVTLADGSVVRALVP
                     QVYLRVMPGDLGNDGALLAGAEVDVKLRGDLVNSGTIAGRQLVSIEAGNIRNLAGGQI
                     SGEQVGLSARHDIDIIGSTVKATDALALKAGGNITVASTTSEWKDQGDRLSQQTTTLD
                     RVAGLYVTNPSGDGVLSVVAGGDIGLKAAEIRNAGKNGITQLVAGGNLDLGAQTLGQS
                     TALNHDSRNHTSNSQTTHAVSSIEGAGDVVLAAGKDITLAATRINAGDGLALQAGGDI
                     NSQVLVDSRSSDFNAGGKRSSLQISQSDETVRGSQLSAADNVLVRANRDVNLIATQVA
                     SSDGTLSVSAGRDVNLLSANETHDFSLDSYEKKKKTLSSTTTTRHAESSDSYAIGTGL
                     MGESVSVTAGRDLTAVGAVVDATGTVVLGAGNNVLITSAEDHHSSESSQSRKKSGFTG
                     GFSNGTASIGYGSSKNSSSTAEQSTTQVGSAIASREGNVLINAGNQLTIAASDVAAGK
                     DLTLVGKDINLIARQDTVDTQASQSSKSSGFSVGVTYDPAKAYRTARDKATEGMADSG
                     TMMGRITRTAEGVAAGVAAVLPGITAGSQRSNSNQSHSTSDARVTHLNAGGNLSLIAN
                     GGSITSQGAQMSAEGDALLMATKDIVLDVAHNTERSDSDSRGKGWGIATNSAGLPFGT
                     NNSRSDGAGQSDTITGTQLSVGGGVRMATTEGDIRLTAANIAAEKDVSIRAAGDLTIR
                     SGQDTVSNANRSDSKAIGTVQISDTEKFSGWHREQHRDDSAQVSQVASTVGSLGGNVN
                     LTAGGKYTQSASNVVAAKDVNITAAEIELLTADESGHYSQSDKDLKIGAFARVKSPLI
                     DLLNNVDAARKSDDRLQKMQGLAAGANAYQAASAISSMAGKGGGGALLSAEAGVGFKT
                     SSSSADGSSQVSRGSTIQGGGNVNLTSTQGDIHVVQGNLSAGNTLSLDSAGDILLEAG
                     QAHVADRSKSSNAGAEVGVGVAVGAQTGVYVYAEASVGSSKSNAESSTWQNTTLTGKN
                     ISMKAEGDTTLRGATATADRIDVKTGGTLTIESLQDIAESMSKNSQVGGRVQVSFGTA
                     WNADGYASAGKANGSYQGVGQQSGLFAGNGGYHVDAGHVNLVGGAIASTHAGNSELTA
                     DSLTFTDLQNHMDYKATSGSISGGFGSSGNGPTDKGVGAVEQLQGIGSSIKSGTFGSV
                     DGVAFGGGLPMHESGSDSSSTRATLTEGTITIGGRKTTAAELGVNTDAAAAHRALEAM
                     PDANKMLADQQAMANAASTVLATSKQIASDIGSYGINKITDAYLEGKSAAEKEAFAKL
                     SPKDQYTALSGFDSSYPDALVTQQKWAPDGTYGRALNAVSTALVGSVAGQAGGQVISN
                     ALAPYAAELIGKTFDPNKQSAVPSEAMQMLSHALLGALLAEANGGSAGTGAAAAGGGE
                     LAAKFLGDYYARQNGGQLTPEQEQQIKALGQAVGAMAGGIGGDGAMGAALGATIAKNS
                     VENNYLNHAERMQFLDAMLSCMKSGERCGEQKQLAALSDARNAALIAACTAAADSPAC
                     RAEQSKLGDAYWSLTQNDSTYLRWIKDNGLDLAQAALTKGNGSQVASDLLTHTSSLDA
                     RYKITCAAAGRCDPFTAGMLALNGKTQEAAANAALNLLFDKAGTGAGVVTNAGGMVMD
                     MAKMNAIYMSIESSKQAWNDFQRIGEIGYWGLVKEKSAGAWSSISGYFGNGWDAASYE
                     LGLNQKWNLADVAANGFTKGDIGLDVALAVISLGDVTAMRAAAKARKLAALESGAAAK
                     PTLNVQELLPNQNTRVLTESEARALGGEKKGLIYVIESPRGKPAARDFQAGTNGAFSD
                     VASEKPAVPALRYTNPNERGVDFIKFDGIEAVGNEKILLIDAKTKLAIWSPSTQREVL
                     STMGRVRSALEQNPGFKVVYEFPNEKVAAEARFFIRQNGMDDVISVRTRNQ"
     gene            23607..24320
                     /locus_tag="QEL58_001114"
     CDS             23607..24320
                     /locus_tag="QEL58_001114"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675612.1"
                     /translation="MSTERIAIYLQARPDRSISIAERHLHVMDRMSAIPCPLGFHGLE
                     LPPVPDCGEELLASYEIKTGLKGLSVIGTYAFRGPGYEYADVAALDEIILYGFRSSNK
                     AVDYPSVLRNGVASVAEAFGAYRVKVTYGMYSMDYQDGVGREGPTLADLKAAGVKDVD
                     GRKNILTMYPAQFWDARLCSDALGFGPEEVFSRLEGKVDKVELTASGVYILLSDKVDL
                     SYEEYLEFNRHAKALLGLQ"
     gene            24346..25086
                     /locus_tag="QEL58_001115"
     CDS             24346..25086
                     /locus_tag="QEL58_001115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014035512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HDS1675613.1"
                     /translation="MIRLCLLLCALLALAACTATAPVQHNPLATWVPSPNQNARTPVI
                     IVIHHTEQKSVQQSLHTLRTANSGGPVSAHYLIGADGHRYQLVADERRAWHAGAGRWG
                     TITDLNSASIGIELDNDGRSPFSAAQIESLIVLLRDLTTRLNIPPRQVIGHADLAPTR
                     KQDPSRFFPWQQLAEAGFGVWPRAADGAAPEGFDAWNALARFGYPLDNRDATVAAFHR
                     RFRGRDDLPKTLDAEDARILHSLLLQMP"
     gene            25154..26320
                     /locus_tag="QEL58_001116"
     CDS             25154..26320
                     /locus_tag="QEL58_001116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005407554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MltA domain-containing protein"
                     /protein_id="HDS1675614.1"
                     /translation="MIDSATFFERKHCVLLAAAVLAGCSTTAPRTGSDAPTPPTPPAA
                     TYAKAAWSALPPVSDSDLQAGFVAWRSSCTRLKTDAVWARPCATAAAVSDKDAAAIRQ
                     FLQRDLDVYALRAGGHQADGLITGYYEPIYAGSLTRTATATVPVYGTPDDLVVVQLDS
                     LYPELKGKRLRGRVDGKVLKPYDDAGTIASKGAKAPVLAWLTDPMDLQLLQIQGSGRV
                     RLADGTQVRLAYAEQNGHPYRAIGRWLVDQGQLKKEDVTMDAIRAWARANPARVPELL
                     RSNPSYVFFVRNPDSPEGPRGSLNVPLTAGYSVAVDRTVVPLGSLLWLSTTRPDGTPV
                     VRPVAAQDTGGAIAGEVRADLYWGSGDAAGKLAGDMKQKGNIWMLWPKGVALPQ"
     gene            26403..26717
                     /locus_tag="QEL58_001117"
     CDS             26403..26717
                     /locus_tag="QEL58_001117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008268793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675615.1"
                     /translation="MTYAKHNARSGAKSAAKKYYKHWAESGLGKGNVLMEARGEKIVR
                     QVEIYGTKMVWADEHAHSDDRFLLADQPVSFLDFDEDDEISAREFESAWKKAREATGY
                     PV"
     gene            26799..27860
                     /locus_tag="QEL58_001118"
     CDS             26799..27860
                     /locus_tag="QEL58_001118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012509689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing sensor histidine kinase"
                     /protein_id="HDS1675616.1"
                     /translation="MSDSAPPPSLDALGTPLAWAGADGCIAGCNPAFARWLGVSARRL
                     LGRPLAALEVQGEALAHFLARDERDSLRLNRLALAVPGEAPRFAEGWMSRRDDGGWLL
                     EAHPVDEFPGLDPTQALPSALSAALKGLAHELRNPLAGLKGAAQLLARRAAQRDASER
                     ELIELIGSEIERLNGLLDQLLSPAPAAPHAELNIHAALERVLRLAENEAGWAVRLQRD
                     YDPSIPEFHGDADRLTQAVWNLVRNAIQAGAGSITLRTRVEHGVRIAEQLHTLALRLE
                     IADDGRGVPEELAEHLFLPLVSGRAEGTGLGLALAQQVAREHRGTLTYRSRPGHTVFT
                     LLLPIGNGAAPTEEAPRDV"
     gene            27853..29301
                     /gene="ntrC"
                     /locus_tag="QEL58_001119"
     CDS             27853..29301
                     /gene="ntrC"
                     /locus_tag="QEL58_001119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010487191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrogen regulation protein NR(I)"
                     /protein_id="HDS1675617.1"
                     /translation="MSDFSTAAQRIWVVDDDRAVRFVLCTALREAGYQVVDFDSAASA
                     LQALGEGPPPALLFTDVRMPGDDGLVLLDKLKAALPQLPVVVMSAYTDVASTAGAFRG
                     GAHEFLSKPFDLDDAVALAQRVLPAVAPAMATPTPAAETPSDQPPQLVGDTPPMRALF
                     RAIGRLAQAPLAVLITGETGTGKELVANALHRESPRAQGPFVALNTAAIPAELLESEL
                     FGHEAGAFTGAQRRHIGRFEQANGGTLFLDEIGDMPLPLQTRLLRVLAQGEFFRVGGR
                     ELIRVDVRVVAATHQDLEGLVAQGKFRADLLHRLDVVRLQLPPLRERREDIAQLASTF
                     LAAAARKLDTPPKRLTAAALQALREHDWPGNVRELENVCWRMAALAAADTIGVADVDT
                     ALNRARGRRTSTNAADPGQWEALLAEWTRRQLAEGVEGLHAQVRERVDHALLEAALQI
                     THGRRAEAAARLGLGRNTLTRKLGAGRRRGGH"
     gene            29395..29964
                     /locus_tag="QEL58_001120"
     CDS             29395..29964
                     /locus_tag="QEL58_001120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005407586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase family protein"
                     /protein_id="HDS1675618.1"
                     /translation="MRLSFAILPLSAAALLSACGSASKKAEPTPPPPSVVSAAKQAEA
                     NLSPASASIVSGRIALMVEPGGIHITGLIGGLQPMQQAGFHIHERGDCSAVDASSAGN
                     HFNPSGAAHGRAGTGKHHLGDMDNLRADAQGRANVDIHLKGVTLGGGAATDIAGRALV
                     VHANADDYRSQPAGNAGVRIACGVIRVVR"
     gene            29996..30622
                     /locus_tag="QEL58_001121"
     CDS             29996..30622
                     /locus_tag="QEL58_001121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase family protein"
                     /protein_id="HDS1675619.1"
                     /translation="MRLIHTSLFVAIAALGLAACGQQPAAPQAETPPAAPAEGTTTEP
                     AATPAPAAAPAADASATAELAPTQGNEAKGSVTFKLVDGKVHVTGQITGLKPGSEHGF
                     HIHEKGDCSAPDGMSAGGHFNPGHQDHGNVATDPHHGGDMPNIKADDKGVATIDGPVS
                     SNVNIGKGDDFDIIGRGLIVHADADDYKTQPTGNAGARLACAVIQKAP"
BASE COUNT         5562 a        10236 c        10235 g         4630 t
ORIGIN      
        1 cgacgggaag ggcggccacc cggccgccct tttcattcct ccggcagcga tgccggttcg
       61 aacaccgcgg tatcgccctg cgcgttgcgc accgtcagcg tgccccgctc gcccagctcg
      121 agcatcggcg ccgaccctcc gccgtgcatc agcattcgcg cgcgcttctg ctgcgtggtc
      181 attttcggat cgatgcactc ggccgtggtc tgcacgccgt tgcgcaggtt caagtgattg
      241 ccctgcagct ggtactggct gctggcgtgg ttgcacaggt tcaactcgct catgaaaccg
      301 gagcggaagc gcagcgtgta gggcgcgtgg cccgggacga acaacgcgtc aatgcgccgg
      361 ccctgcgcgt cggtggcgcg caccagttgc cacaggtgtg cttcaagccg atcgttgctg
      421 ggcgtgctgg caacggctgc atccgcagac atgcccagca gcacagcaat gatgaggatg
      481 gggacgtgct tcatgccgat ctcccgatgc atctgggtag tgccggccgc tggccggcaa
      541 catccgtgtg ttggcgcagc cggccagcgg ccggctctac ccaccatgaa gaagggcggc
      601 ctctcggccg cccttctgtc gtcttacttc ttctcgacgg ccgactcgac caccatgtcc
      661 agcacgtacg cctgcgacgg ggcatcggcc ggcgggttct tcacctcgta gcgcttcacg
      721 cgcaccacgt tgcgcacgcc gtcttcgtgg gtgtagccct cgatgttgcc gtagaagttc
      781 tcgaacttgc ccggctcgcc ctgcttcagg cccttgtcgt cgaacttcac ctcgcgcacc
      841 tgcaggcact ggtagtccgg gatcagcggg tgcgagcact tctcggtctt ggccgccact
      901 tccaggaaca cggtttcgcc ggcgccgccg tagcgggttt cagcggtcgg ttccgggttg
      961 aacaccagta cgtcgccctt ggcggtggtc agggtcagct tgccgtcggc atcctgctcg
     1021 gccttcagct cgccctgcag gcggctcgac acggcttcgt ccagcgccat cagcgccttg
     1081 tcggtgcagg ccatcatcgt cgacgccatc gcgcccacgg tcagcttgcc gtcggccaag
     1141 ctgtagctgc cgcccatgtg gttgcaggcg ttgctgaccg acaggcggcc atcagcgaag
     1201 tccagggtga ccggcttgtc ttcgcgggcg aacagcgcat cgatgcgctt gccgtcggcg
     1261 ccggtggcct gctgcagcag ccagtgctgg ctctgcaggc gctgcgcatc caggtgcgcc
     1321 agcgtctgct ggtctgctgc cttggccgcg gccggggcca cgtcgtcgcc gccagtgccg
     1381 gccggggccg gggtctggct gcaggcggcc atcagggcca gcgggaggag cagggtgagc
     1441 ttgcggttca tggtgattct ccttggggaa ccgtggggga aacggggtag ggccggcaac
     1501 ggggttgccg ggccccggcg ctgttcagct gccggacggc aaccacagca gcagcgccgc
     1561 gcccagcgcg atgcggtaaa tggcgaaggc ggtgaacctg tgcgacttga tgtagcccat
     1621 cagccacttc actacgacga agccggtgac ggcagcggca aggaacgcca cgcccacgtc
     1681 ggtccagttc tcgctgccca gctttccgtc cttggccatt tccaggaagg tgtaggcgct
     1741 ggcggcgaac atggtgggaa tgccgaccag gaacacgaac tcggcggcgg ccgcacggcg
     1801 gctcaggccc agcagcatgg ccaggaagat cgccgaggcc gagcgcgaag tgccggggaa
     1861 cacgccggcc accacctgcg ccaggcccac gccgatcgcc accgtccagg tcacctggtc
     1921 gcggtcgggc aggcgcgcgg tgtaggcctc caccagcagc atccagacgc caccgatgat
     1981 cagtgcccag gccaccgggc tgaccgtttc cggcagcgac cagccggcct tgcgcaccac
     2041 caggccgacc acggcggtga ccaggaaggc ggcgcccagc ttgaacacat agtcgcggtt
     2101 ctcgcgctgg ttgaagccgg tggccagctg cagcaggcgc tggcggaaca ccagcaccac
     2161 ggccacgatc gcgccggcct ggatgacgat gttgaagaag tccgagcggg ctcccagcca
     2221 gtgctgggcg atgagcagat ggccggtgct ggagatcggc aggaattcgg tgaggccttc
     2281 gaggatgccc agcagcaggg cggagagcag gtcggacatg gacggtgcgt gcacgcgcgg
     2341 cggaaggaag aaggtcgaga ggatagacga tccctgctgc accaaacggg tgcgtctggt
     2401 ggcgggcgca cccgtttggt gcggaccgtt ctgcaccgcg acggggcgcc ctttttgaaa
     2461 tcaatgactt gcagctattg aaaagttggc acggtcgttg ctgtacctca gcaggcattc
     2521 atccccatcc gaggtcgtac cgatgtccgt ggaaaacgta gaaaagctga tcaaggacaa
     2581 ccagatcgag ttcgtcgacc tgcgctttgt cgacatgcgt ggtgtcgagc agcacgtgac
     2641 cttcccggtc agcatcgtcg agccgtcgct gttcgaagaa ggcaagatgt tcgatggcag
     2701 ctcgatcgcc ggctggaagg gcatcgccga atcggacatg gtgctgctgc cggataccgc
     2761 cagcgcctac gtcgacccgt tctacgccga tccgaccatc gtgatcagct gcgacatcct
     2821 cgacccggcc accatgcagc cgtacggccg ctgcccgcgc ggcatcgcca agcgcgccga
     2881 ggcctacctg aagtcctccg gcatcgccga aaccgcgttc ttcggcccgg aaccggaatt
     2941 cttcatcttc gactcggtcc gcttcgccaa tgaaatgggc cacaccttct tccaggtcga
     3001 ctcggaagaa gcggcgtgga acagcggcgc caagtacgac ggcgccaaca gcggctaccg
     3061 cccgggcgtg aagggcggtt acttcccggt cccgccgacc gacaccctgc acgacctgcg
     3121 cgccgaaatg tgcaagacgc tggaacaggt cggcatcgaa gtggaagtgc agcaccacga
     3181 agtggccacc gccggccagt gcgagatcgg caccaagttc agcaccctgg tgcagaaggc
     3241 agacgaactg ctgcgcatga agtacgtgat caagaacgtc gcgcaccgca acggcaagac
     3301 cgtcaccttc atgcccaagc cgatcgtcgg cgacaacggc agcggcatgc acgtgcacca
     3361 gtcgctgtcc aagggcggca ccaacctgtt ctccggtgac ggctacggcg gcctgagcca
     3421 gctggcgctg tggtacatcg gcggcatctt caagcacgcc aaggccatca atgccttcgc
     3481 caactcgggc accaacagct acaagcgcct ggtgccgggc tacgaagccc cggtgatgct
     3541 tgcctactcg gcgcgcaacc gttcggcctc gtgccgcatt ccgtgggtgt ccaacccgaa
     3601 ggcgcgccgc atcgaaatgc gcttcccgga tccgatccag tccggctacc tcaccttcac
     3661 cgcgctgatg atggccggcc tggacggcat caagaaccag atcgacccgg gcgcaccgag
     3721 cgacaaggac ctgtacgacc tgccgccgga agaagagaag ctgatcccgc aggtctgctc
     3781 ctcgctggac caggcgctgg aagcgctgga caaggaccgt gagttcctga aggccggcgg
     3841 cgtgatgagc gatgacttca tcgacggcta catcgcgctg aagatgcagg aagtgaccaa
     3901 gttccgcgcg gccacccacc cgctggaata ccagctgtac tacgccagct gaccggtggc
     3961 gatggcggtg ggcttccccc tcccacccgc cgccatcgct tccgacttcg cggctgggga
     4021 gccgcggtca gatcggggtc ggatcccttt cgttcacgaa cgggctctga cccctgatcc
     4081 aggggcaaga gagagaccgg atacgcgacc agggccgccc tccctcccgc gtcggtcgtg
     4141 caaggagaga ggcacggccg tcccggccct gtacgtgtcc ggtgcaacag ccgcggccat
     4201 catcctgatg gccggtggtt gcctgatgcc aacgcgcgct ggcgcgctgg ccccatccac
     4261 cctcgggaca tgcgcatgaa actgatctcc gccatcatcc ggccgttcaa gctcgacgag
     4321 gtccgcgagg ccctctccga cgcaggcgtg tcgggcatca ccgtgaccga agtgaaaggc
     4381 ttcggccgcc agaagggcca caccgagctg tatcgcggcg ccgagtacgt cgtcgacttc
     4441 ctgcccaaga tcaagatcga aaccgtggtc accgacgagc gtgccgatgc ggtgatcgag
     4501 gcgatccagt cgtcggccgg caccggcaag atcggtgacg gcaagatctt cgtcaccgcc
     4561 gtcgaacagg tcatccgcat ccgcaccggc gagatcggtg ccgacgcgct gtaatccccc
     4621 ttccggagat tcccccatga agatgcgcct tctcaccggg tggcaagccc ggttccatat
     4681 cgtgtgcctg ttgatgctgc tcagcgcgct ggccgccggc gcgtggccgg gcagtgccca
     4741 tgcccaggcc caggtctcgc cgctgccgag cgaaagcgtg gcggtcgaag cgttgcagga
     4801 cccggctgcg gcggccgccg cgcctgcggt ggccgaagtg gctgccgcct atgaccgcgg
     4861 cgacgtcgcc tggatgctca cctccaccct gctggtgctg ctgatggtgg tgcccgggct
     4921 ggcgctgttc tatggcggcc tggtgcgttc gaagaatgtg ctgtcggtgc tcagccagat
     4981 cctggtggtg ttctcgctgg tgctgctgct gtgggtggcg tatggctaca gcgcggtgtt
     5041 cagtgccggc aatccgttct tcggctcgtt caccgaattc gccttcctca agggcttcac
     5101 ccccgactcg gtcggcaaca cgccgatcaa gggcctgccg gactatctgt tcgtggcctt
     5161 ccagtcgacg ttcgccggca tcaccaccgc gctgatcgtc ggtgccttcg ccgagcgcat
     5221 caagttccgc gcggtgctgc tgttctcggc gctgtggttc accctcagct acatcccgat
     5281 ggcgcacatc gtctggggcg gcggttacct cggtgaactg ggtgcgatcg acttcgcagg
     5341 cggcaccgtg gtccatatca atgccggtgt ggccgggctg gtggccgcgt ggttcgtcgg
     5401 caagcgcctg ggctacggcc agaccgcatt gaagccgcac aacgtgccgt tcacctatat
     5461 cggcgcaatg ctgctgtggg tgggctggtt cggcttcaat gccggctccg ctgctgcggc
     5521 cgataccgtg gcctcgctgg ccttcctcaa caccgtgctg gccaccgccg ctgccgtgct
     5581 gggctggacg ctggtggaag ccatcggcaa gggcaagccg tcggcactgg gcgccgcctc
     5641 gggtgcggtg gccggcctgg ttggcatcac cccggcctgc ggtacggtcg gcccgcttgg
     5701 cgcgatcgtg atcggcttcg tggccggcgt ggtctgcgtg tggggcgtga ccggtctcaa
     5761 gcgcctgctg aaggtagatg acaccgctga cgtgttcggt gtgcacggtg tcggcggcat
     5821 cgtcggtgcc atcctcaccg gtgtgttcag cgcacagtcg ctgggcggca ccaaggccga
     5881 tctggatatt gcccatcagg tgtgggtgca ggtggtcagc gtcggcctca ccgtgctgtg
     5941 gtcggcggtg gtgaccacgc tgatcctgct ggtggtgcgc agcgtggtcg gcctgcgtgt
     6001 caccgaggaa gcggagcgca ccggcctcga tgtcacatcg catggtgaat cggcctacga
     6061 ggcctgaccg gcttcacggt ttcaacggcg tcctcccact gcccgtggca gtggggggat
     6121 ggtcagcatc accttgcatc gcgggcacct gctgacgcaa cggcccactc ggggcagagc
     6181 cgcacgcgcg ggccggcaac agaagccctt cgtcgggctt cacacttttg cgttgaacgc
     6241 ctcgcggtcg ccgcccggcg gctctgtttc ctgtaacgcg attcccttaa agtgctgcct
     6301 cttccgaccg gttcttcgcc ggtctggcag ccatctgcag ggaaaagagc atcgtggaac
     6361 agggacgtta tgtacgcagc cgcacgttgc ggtggcggtt gtcggtgggc gtggtactcg
     6421 ccatcgccgg cgtgcaggca ccggcctggg cacaggcggt atcgccggag caggagttgc
     6481 tccgacagca ggagcgcgaa cgcgcgttgc gcgagcagca ggagtccacg ccggatgtcc
     6541 ggctgcagcc ctccacggaa gaccttggcc gtctgccggc tgatgagtca ccgtgcttca
     6601 ccatccacac catcgcgttg cagggcgatc ttgccgaccg cttccgctgg gcgctggcgg
     6661 ccgccgatcc gcgcagcgac cccgccacgg ggcgctgcct gggaaccgcc ggcgtggaca
     6721 tggtgatgaa acgcgtgcag aacgcgatca tcgagcgcgg ctacgtcacc acccgcattc
     6781 ttgccgcacc gcaggacctg aagacgggcg tcctgacgct gaccgtcgtg cctgggcggg
     6841 tcaatgccat ccgcttcgct gctggcgaag gccgcccccc cgctctctgg aacacgatgc
     6901 cggtggcgcg cggcgatgtg ctgaacctgc gtgacatcga gcaggcgctg gaaaacctgc
     6961 agcgggtgcc gaccgcgtcg gtggacatac agatcgcacc accggccgat ggcgccgccg
     7021 ccaaaccggg cgagagcgac ctgctgatca gctggaagca ggtccgtccg gtgcgggtga
     7081 acttcaccct ggatgacgcg ggcagccagt ccactggcaa gatgcaggca ggcgccaccg
     7141 tatcggtgga caaccctgcc ggcctgagcg atctgttcta cgtcaacgtg ggccggtcgg
     7201 cattcaatgg cagcgagcgc agcaccgaca gctggtcggc gcactacagc gtgccgctgg
     7261 gcgcgtggct gctgggtgcc aacgccagca gctacgacta tgagcagacc gttgccggtg
     7321 cgttcgagaa ttatgtctac agcggctcca gccgcaacgc cgagcttcgc ctggcccgca
     7381 tgctgttccg caatgcgcat gccaagacca gcatgtacgc gcgcggctgg taccgcgaat
     7441 cggacaactt catcaacgat accgagattg aagttcagcg ccgccgtatg gcgggctggg
     7501 agctgggcct gggccaccgc cacttcatcg gcaaggccac actggatgtg aacctggcgt
     7561 accgcaaggg taccggcgct ttcaacgctt tgcgtgcgcc ggaagaggcc ttcggcgaag
     7621 gtacggcgca tggccgcatc tacaccgccg atgcgcagct ggtggtgccg atgcagtggg
     7681 gccgccagag cctgcgctac accggcagct ggcgcgcgca gtggaatcgc tcgccgctgg
     7741 tgccgcagga ccgcttctcc atcggtggcc gctacaccgt gcgtggcttc gacggcgaaa
     7801 tgtcgctcac cggcgagcgt ggctggttgc tgcgcaatga actgggcgcc gccctgggcg
     7861 gtggcgtgga ggcctacgtt gccatcgatc acggtcgtgt tgccggtccg tccaccgcgc
     7921 gcctgctggg tgaccggctg accggcaccg cactcggcct tcgcggcggt acccgccaca
     7981 tcaactggga tgcctttgtc ggcagcccgt tgtccaagcc gcgcggtttc cagaccgcct
     8041 acaccacgtt cggaatgaac ctgggcgtct cgttctgacg cctgcgcatc tccggtacgc
     8101 gctgcatcca gcgcgaccgg cacgatgcag caccgcgcag cctgctgcgc gcacaaccca
     8161 acagcaccga aaggaatcag cgccgtgaac aaagtctatc gtctggtctt caaccgcacg
     8221 ttgggtgtca tgcaggttgc gtccgaactg gtcagcgctg cccagggggg cgtcgatcac
     8281 cgcggcggcc ggacggtcgg taccctgcag ccgatcagct tcgcgctgtg gctggtgctg
     8341 ggatgggtgg gactggtgca gccgctgtcc gcacagcagg cgccgaccga cccgggccgg
     8401 attgccgccg acccgggtgc accggccaac cagcgcccga ccgtggtcac ttcggccaat
     8461 ggcacgcccc aggtgaacat caccacgccc agtgcgggcg gtgtgtcgcg caatacctac
     8521 cagcagttcg acgttggcca gcagggtgtc atcctcaaca actcgcgcgg cgacgtgcag
     8581 acccagctcg gcggctgggt gcagggcaat ccgtggttgg ccaccggcac cgcacgcgtc
     8641 atcctcaacg aggtcaacag cagcaatccc agccacctca acggctatgt ggaagtggcc
     8701 ggggcccggg cgcaggtggt catcgccaat ccggccggca tccaggtcaa tggcgccggc
     8761 ttcctcaacg ccagccgtgt cacgctgacc accggcacgc cgatcgtcag caatggcgtg
     8821 ctggagggct atcgcgtgga aggtggcagc atcggtgtcg gtggcgccgg cctggatacc
     8881 agccgcgccg actacaccga catcatcacg cgctccctgc aggtcaacgc cggcatctgg
     8941 gccaaccagc tgcaagccag cctgggcagc aacgtggtca gcgccgatca cagcagcgtg
     9001 caggtgcagc ccgctgccac cgcagcaccg gtcttcgcat tggacgtggg cgcgctcggt
     9061 ggcatgtatg ccaaccgcat ctggctggtc ggcaacgagc atggcgtcgg cgtgcgcaat
     9121 gccggcagga tcggtgccca ggctggcgag ctggtggtca ccgccgatgg ccggctgcag
     9181 aacatcggcg caatgcatgc gcagcaggac ctgcgcatcg atgccagcgg tggcatcgcc
     9241 aatgccggca cgctcagtgc cgaacgcgag ctgcgcctgc agaccccgca ggatgtcgac
     9301 aacagtggcg gcacgctcaa cgcgcgtcgc atcgaagtga acgccgatgc gctgcgcaac
     9361 cgcagcggca gcatcgaaca gcttggcgcg caggtgcttc agctgcaggc caccgacctc
     9421 agcaacctgc agggccgcat cggcaatgtg cccagtacgt cgccgggtac aggcaatggt
     9481 gacggcagcg gtaccacgcc gggaacgggc actccgggaa caggcactcc gggatcaggc
     9541 acgccaggca ccggcacgcc aggtacgggt acgccgggca ccggtggtac cgcaccagtc
     9601 acgccgccgc tggcaaccgg tctgctcaac attgccggaa cactggacaa cgacggcggt
     9661 cgcattgaag ccaccggcga tctgcagctc agcgcccgca acagcctgga caacagcgac
     9721 ggtacgttgg gcgcgagcac cctgcaggtg cagggacagg cgctgcgcaa tgcccgtggc
     9781 acgctgcagg tgcagggggc ggccagcgcg caggtgctgc agctggacaa cagcagcgga
     9841 cgcatgacgt tcgcgcgtgg ctttgaactg caggcgcaat cggtgtcgaa ccgcggcggc
     9901 agccttgccc acggcggcaa tgccgaaacg aactggacga tcggccggct cgacaacagc
     9961 gaaggcagca tctccagcaa tgccacgcga cttggcctcg atatcggcac cgcgatcaac
    10021 acgcggggca gcatcaacca cgccggcagt gacggactgc tgctgcgtgc gcaggtactg
    10081 gagggcacgc agggcagcat tgcgaccggt ggtgcggcca acctgctgct gggccgcgcc
    10141 gaccaccgcg gtgcgcagct ggtcgcccgc cagcttgagc tgaccgcaca ggacttcgac
    10201 aaccgtggcg ggcgcgtgct gtccaccggg cagcaggcca gtgcgctcaa cgtccgcgat
    10261 catctggaca acagcgacgg cggcctgctg gccagcaatg ccgacctgca gatcgacgca
    10321 gcatccttcg gcaatgccgc cggcaccgtg cagcaggcgg gcaccggcaa cctgcgcatc
    10381 accaccgcca acctgcaggg cccgggcggc accgttctca gcaatggcac cctgcagctg
    10441 cacggcgata ccctgaacct gcgcaacggc accaccgccg cgcagcgcct cgatgtgcgc
    10501 gctggcgacc tgaccaccgc cggtggcatg ctgacctcga cgggcagcga cgcgctgcgg
    10561 ctgcaggtat cgcgcaccct ggacaacagc ggcggcaccg ttggcgccaa tggtgcgctg
    10621 gacatcaacg gcggcatcct catcaacgac ggcggcaaac tgatcgccgc aggcaccggc
    10681 accagccgta tccatgcccg ccaacagatg cagaaccagc gcggtctgct gtccgccaac
    10741 ggcgacctgg agatcaacgc cgatggtctg ctgaatgagg gcggcagcat cgaccacgct
    10801 ggcaccggca cgctgcagat cgatgcgact accctgcagg gggctggcgg cagcatcgcc
    10861 agcaacggcc agctgcagtt gagcggacag cagctggacc tgcagaaggg cagcacccgc
    10921 gcccgcgacg tgaagatcac ggccacgggc ctggacacca gcggcggcag cctgctggca
    10981 ttgggcaaca acgcgatgca actgcaggtg cagggcctgc tgcgcaacga cggtggcagc
    11041 atcagcgcca atggcgcgca gcagatccag gcggggacgc tgtccaaccg tggcggtgcg
    11101 ctcacttcgg ccggcactgc agcttcgcag atccgggtcg acggcacgct cgacaacagc
    11161 agtggcagca tcgccagcaa tgccggcaac ctgcagctga agagcggtgc gctggtcaat
    11221 gccaacggta ccctcagcca tgcgggcagt gccggcctgg tcatcgacac cgggcgcctg
    11281 gacggggcga agggacagat cgccactgct ggtgccctgc agctcacggc ggccgaggtc
    11341 gaccaccagg gcgcgtcgct ggctgccgcg cagctggata tcacggcgac cgggttggac
    11401 aaccgcggcg ggcgcatcat cgccaccggt accggtggca ataccctgcg cgtgcagggc
    11461 gcgctggaca acggcaatgg cggcaccctc gccagcaatg gcaacctcga tatccacgcg
    11521 cgcaccttcg gcaatgccgg cggaaccgtg cagcaggccg gttccggcag cctggccatc
    11581 accacgcagg acctggccgg cgccggtggc accctgctca gcaacggttc gctggacctg
    11641 cagggcgaca ccctcgatct gcgcgacggc accacgaccg cgcaacgcat cagcatcgac
    11701 ggcgacagcg tgatcaccgc gggcggcaag ctgagtgcgc ttggcaccca ggcgctgcag
    11761 ctgcaggccc gcagcctgct cgacaatacc ggcggaacgc tgggcagcaa tggcgccatc
    11821 aacgtgcgtg cggggcgctt cgccaacgac catggcacgc tgattgcagc gggtgaagcg
    11881 gcctctgcga tccgggccgc acagctggag aaccgcagcg gctcgatctc tgccaacggc
    11941 aacctgcaca tcgaggcgga agtactgtcg ggccaaggcg gcagcatcgg tgctgcccgc
    12001 gcactggcgc tgcagggtgg gtcgctggac ctccgcggcg gcagcgtggc ggccgagcag
    12061 ctcgacatcg tggccgacag cctggacaac agtgcgggtg cgctgcgcgc aaccggcagc
    12121 gggacgctgg cactgcaggt aagcggccgc ttggccaacg acgcgggcac catcgccagc
    12181 aacggtgcgc agcgcatcga agccggcgaa ctctccaacc gcggtggcac gctcagttcg
    12241 gcaggcagcg ccactaccga gctgcaggta gcaggcctgt tcgacaacag caacggcgtg
    12301 ctcgccagca acggcgccgc gctgaagatc gatgccggcc acatggccaa cgtgaagggc
    12361 acgctcagcc atgccggcac ccagggcctg ctgctgcgca ccgggcaact ggacggccag
    12421 ggtggcagca tcgccagcgc aggcggcatc accctgcagg cgggcagcgt ggaccatcgc
    12481 ggcgccaccc tgcaggccgt gcgcatcgca ctggacgtac agtccttcga caaccgggcc
    12541 ggcaaggtca tcgcgaccgg tgccgagggc agcacgatcg acgtggtcgg cacgctggac
    12601 aacggcgagg gcggcctgct ggccagcaac ggcaacctcg gcatccaggc ggcggtgttc
    12661 ggcaatgccg gcggcaccgt gcagcacgcc ggcgaaggcg ttctgtcgat cgacgccggc
    12721 acgctcaacg gcaccggcgg cacactggtc agcaatggca gcctgttgct caagggcacc
    12781 accaccgacc tgcgggcagg tgtcacctcc tccaagcgga tcgagatcga caccggctcc
    12841 ctgatcaccg ccggcggcac gctcaccgcc accggcaatg acatgctgcg cctgagcgcg
    12901 cgcgaacgcg tcgacaacag cggcggtacc gtgtccagca acggcgggct ggaactgcgc
    12961 agtgttgcgc tggtcaacgc gggcggcacg ttgcagtccg cgggtgcagc ggccagccag
    13021 ctgatcatcg gccaggacat caacaaccgc ggcggacgca tcctggccaa tggtgggctt
    13081 ggcatcagct ccggcggcat cgacaaccag ggcggcacgc tgcacagcgc cgcacggctg
    13141 gtggtcaagg ccgacggcct gctcgacaac agcaacaagg gtgtcatcgc cagcggcgcg
    13201 ggcatgcagg tggcggcggc ggcgctggac aaccgcagcg gaagcatcga gcaggcgggt
    13261 gacggcctgc tgcagatcga tgccatcacg ctgcagggcc acggcgggcg catcgtcagc
    13321 aacggcgagc tgcaactgaa gggtgagacg ctggatctca gcgcaggcac caccgccgcg
    13381 cagcaggtca gcatcgaggc tggccagctg gacaacacgg gcggtacgct gaacgccacc
    13441 ggcaaccagg cgatgtcgct gcaggtgcgc ggcgcgctcg gcaatgacgg cggcaccctc
    13501 gccgccaacg gcgcacagca gatcagcgcc ggttcgctgt ccaacgtggg tggcacgttg
    13561 agctcggcag gtacgtccga tacgcggatc aacgtcaccg gccgcttcga caacagtcgt
    13621 ggcaccctgg ccagcaacgc cggcaacctt cgactggacg cggtgcagct gctcaacgtg
    13681 gccggcagca ttgtccatgc aggcaagggc gtgctgaagg tgcaggcaac ccagctggag
    13741 ggagccggcg gaagtatcgc cacggcgggc gcattgcagc tggatgcggt gaccgtggac
    13801 catcgcggtg ccacgctcaa tgccgatcac ttcaccgtca acgccgaccg cttcgacaac
    13861 cagaacggca agctgctggc gacgggcacg caggccagca ccgtgcaggc caccacctcg
    13921 ctggacaacg gcggcaacgg cctgatcgcc agcaatggcg acctgaccct gaccagcgca
    13981 ctgttcggca atgccggcgg taccgtgcag caggccggca ccggcacgct ggcgatcaac
    14041 gcgcacacct tgaatggcca gggtggcaag ctgctcagca atggcgccct gcagctgacc
    14101 ggcgaaacca ccgacctgcg cgacggcacg ctggccgctg cccgcatcgc cgtggacacc
    14161 ggcacgctgc tcaatgcggg cgggtcgatc atcgcctccg gcaccgatac attgaaggtg
    14221 tccgcgcgcg accggctgga caacagcggg ggcacgctgg ccggcaacgg ctcgctggat
    14281 ctgcgcagca cgcagctgct caacaacctg ggcaccatac aagccgccgg cagcggcagc
    14341 agcaccctgg cgatcaccca tgcgctggag aatcgcggtg gtcgcatcct gaccacaggc
    14401 gatgcaggcc tccgcgcggg cgcgctcgac aatcgcggcg gcaccgtgca cagcgatggc
    14461 aacagcgcac tgaccgtgcg cgtggacggc ctgctcgaca acagcgacaa gggcaccctg
    14521 tctgcgggag gcgcgctgct ggcagaggca caggccatca acaacagcgg cggtaccgtg
    14581 gctgcggggc aggatctgcg cctgaccagc accgatctgc tgcgcaatgg cggcggcctg
    14641 atccaggccg gcaagcacct gcaggtctcg gccggcggtc tgaacaacaa cagtggccgg
    14701 atcatcgcca acgacctgca gctggatacc cgcgggcagg tgctggacaa ccgcagcggc
    14761 atcattgcca gcctgtccgg agatgcagcg ctgcgcagtg gtgcgctgga caacaccggt
    14821 ggcctgctgc agtcggcggc ggcgctcagc atcgacacct ccggacagcg gctgaccaat
    14881 gccgcctcca atggcaacgg catcgtcagc agcggcacgc tgcagatccg cagtggcgat
    14941 ctggataatc gaggcggctc ggtgttcgcc aaggccggtg ccgatgtaca ggccatcaac
    15001 atcgacaacg gcggcggtgg ctcgctggtg agtgccgccg acctgctgct gcgggcgcag
    15061 cagctggcaa acagcggtgg caacgtgacc gccggtggca gtgccgacat cggcttgcag
    15121 ggcgccctgc tcaacagcgg cggcctgctg gcagcgaccg gccgccttga cctgcaggca
    15181 ggttacatcg ataaccgcaa cacgctcagc cagggcaatg gtcctgcgct ggggttgcag
    15241 ggcaggaacc tgcgggtgac caccggcaat ctggacaacc agaacggcca gttgctggcc
    15301 gacgacctgc agctgcaggt gaaccagcgc ctggacaaca gcggtggcca gatctcggcg
    15361 gcactgacct ccgatgtgcg tgccgatact ctggtcaaca gcggaggtac gctggtggcc
    15421 ggcaggcagc agaccctccg cacccgcgag atcgtcggtg acggccggct gatgtcgcag
    15481 ggcgacatga ccctggaact gggccagagc cacaccaatc gtggcgagat ggtggccaac
    15541 ggtacgctca gcctgtccgt ccagggcaac ctggacaacg ccggcaagct ggccggcgcc
    15601 aacgtcagca tccatgcggg caacatcacc aatgcgacca ccggtgagat cagcagcatc
    15661 ggcctgaccc gcctggatgc cggcagtgca ctggtcaact acggcctgct ggacggcaac
    15721 gtcacccata tcacagccgg cagcgtcgac aacatcggca gtggccgcat ctacggtgac
    15781 cgcgtcgccg tccaggcagg tgctctcaac aacgtggcgg ccaacatcgg cggcgtggac
    15841 cgcgccggca ccatcgccgc gcggcagcgc ctcgacctgg gcgtcggcac gctgaccaac
    15901 agtggcagga gcctgatctt cagcgatggc gacgccgcca tcggcggcgc cctgaatggc
    15961 ctgggcgcag tcggtagtgc gcagaaggtg gacaacctcg gttccaccat cgagatcagt
    16021 ggcaacctgg acctgtccgc gctggcggta aacaacatcc gcgacaacgt ggtcgtggag
    16081 aaggtcacca ccgtgcatgc gccggtccgg ctggagcagc ccggctggtt caagaacgcc
    16141 accaacaaca accgcgattt cagggcaacc tcgaactacc agccgtacga gatctactat
    16201 ctcaatccgg ccgacatcct tgaagacacg ccgtatgtca ccccggatgg ccagcagatt
    16261 cgcaaggcgg tcatccggct gaccagcaac accagcgcct atgccttcgc gcgtggcggc
    16321 gtgcacggcg cgcgcgcctc gcgcgaacgc ctgaacgtgc aggatggcac ggtcacgatc
    16381 tactacttcg cccgtgccga caaccgcaac aaccccgacc agctcggtgc gggcgcagag
    16441 gatccgttcc gcgatctgag cacccgtggt gcgggcgcgc cgccgatgga gtacgtgacc
    16501 gacaccctca actacaacgc ggcctacggc acctgcacca ccacctgcgt gcagatcatc
    16561 acctatccgg actatgacaa cccggaatcg acgctgatca acatgcagcg ccacccccag
    16621 gagaccagcg ggaacgagaa gacccgcatc gccacccgta ccacggtgga agacgtggtg
    16681 gtctcggcgg gcgacaacgc cgtgatcaat gccggcggca acatgcggat cagcaccgat
    16741 cggctggaga accgcttcgc caacatcgcc gcgggtcgtg acctggccat cgtcggcctg
    16801 aaccgcgatc agtccgaagt gatcaacgcg gccgaacagc tgacccgcac cagtaccttc
    16861 gacaacgtgt ccatcaccta cggtggttcc tccagtcgct ggaaggccgc ccccatcacc
    16921 gaaaagaccg gtgcgctggg ctcggcgatc actgcgggcg gcaagctcac catcgatgtc
    16981 ggcaacctgc gcaacgacaa caccggtggc aacaacccca atgccggagg cggcaagggc
    17041 acggcgcagc tggataccgc aggccatggc gcaggctcgg tggggcctgg ggctggcagc
    17101 gtgcagggcc ctggccagag tgtgggccag ggtgcgggta gcgtcgacgc acaggggccc
    17161 ggcacggctg gcgctgcgca gggtgccagc ggcagccaac agcaggcggt ggccaaggcc
    17221 gaaggtacgc gggcggacac ggccggcgcg cagggccccg gccaggctgg caacgccggt
    17281 gcgggcgccg gcacggcgca ggacatcagt gcggcacagg ccgggcagac caatgccaac
    17341 ggtccggccg cggtccgcac cggggagcat gccggcagtg gtggcaatgg cgccgtggac
    17401 ggcaagcagg ccacaactgc aaagggttcg gatccgcgtg tggtggtgac caccagcccg
    17461 aatgccagtg cgcccactgc cagcctgttc aatgtggacg ccaaccgtgg caaccacatc
    17521 gtggaaaccg acccacgctt tgccagctac cgcgattggc tcagttcgga ttacctgctg
    17581 cagcgcgcag gcttcgaacc ctcgcagacg cagaagcgcc tgggcgacgg cttctacgag
    17641 cagaagctgg tgcgcgagca gatcggtgag ctcaccgggc gccgcttcct taccggccat
    17701 gcaagtgatg aggatcagta ccgcgccctg ctggaagccg gcgctacggt cgccagtgaa
    17761 tggggcctgc gaccgggcgt ggggctgacc gccgaacaga tggcgcgact gaccagcgac
    17821 atcgtctggc tggtggaaaa ggacgtcacc ctggccgatg gctcagtggt ccgtgcgctg
    17881 gtcccacagg tctacctgcg ggtgatgccg ggcgacctcg gcaacgatgg tgcgttgctg
    17941 gccggcgcgg aggtggacgt caagctgcgc ggtgacctgg tcaacagcgg cacgattgcc
    18001 ggccgccagc tggtcagcat cgaggccggc aacatccgca acctggccgg tggccagatc
    18061 agcggtgagc aggtgggcct gtcggcgcgg cacgacatcg acatcatcgg cagtaccgtg
    18121 aaggccaccg acgcgctggc actgaaggcc gggggcaaca tcaccgtcgc ctcgaccacc
    18181 tccgaatgga aggatcaggg cgatcgcctg tcgcagcaga cgaccacgct cgatcgcgtg
    18241 gccggcctgt atgtcaccaa ccccagtggc gacggcgtgc tgtcggtggt ggccggcggt
    18301 gacatcggcc tcaaggcggc ggagatccgc aacgccggca agaatggcat cacccagctc
    18361 gttgccggtg gcaacctgga tctcggcgca cagacgctgg gccaaagcac cgcgctgaac
    18421 cacgacagtc gcaaccacac cagcaacagc cagaccacgc atgcggtgtc ttcaattgaa
    18481 ggtgctggcg acgtagtgct ggctgcaggc aaggacatca ccctggccgc cacccgcatc
    18541 aacgctggcg atggcctggc cctgcaggcc ggtggggaca tcaacagcca ggtgctggtg
    18601 gacagccgca gcagcgactt caatgccggt ggcaagcgca gctcgctgca gatcagccag
    18661 agtgatgaga ccgtgcgcgg cagccagctg tcggcggccg acaacgtgct ggtgagagcg
    18721 aaccgcgatg tcaatctgat cgccacccag gtcgccagct cggatggcac gctgagtgtt
    18781 tcggctggcc gtgacgtcaa tctgctctct gccaacgaga cgcatgactt cagcctggac
    18841 agctacgaga agaaaaagaa gaccctgtcg agcaccacca ccactcgcca cgccgagagc
    18901 agcgacagct acgcgatcgg caccgggctg atgggcgaga gcgtgagcgt caccgccggc
    18961 cgtgacctga ccgcggtggg cgcggtggtc gatgccactg gtacggtggt tctcggcgcc
    19021 ggcaacaatg tgctgatcac ctccgcggaa gatcatcaca gcagcgagtc cagccagagc
    19081 aggaagaagt ccggcttcac cgggggcttc tccaatggca ctgcttcgat cggttacggc
    19141 agctcgaaga acagcagcag cactgccgag cagtcgacca cccaggtcgg ctcggcgatt
    19201 gcttcgcgcg aaggcaacgt gctgatcaac gcgggcaacc agctgaccat cgccgcatcg
    19261 gacgtggcgg ccggcaagga cctgaccctg gtcggcaagg acatcaacct gattgcccgc
    19321 caggacacgg tagacaccca ggccagccag tcgagcaagt ccagcgggtt ctcggtgggg
    19381 gtcacctacg atcccgccaa ggcctaccgc accgcacgcg acaaggccac cgaaggcatg
    19441 gccgacagcg gcacgatgat gggccggatc acgcgtaccg ccgaaggcgt ggcggccggc
    19501 gtggcggccg tgctgccggg aatcaccgcc ggcagccagc gctcgaacag caaccagagc
    19561 cactccacca gcgatgcccg ggtcacccac ctcaacgcag gaggcaatct ctcactgatc
    19621 gccaatggcg gttcgatcac cagccagggt gcgcagatgt cggctgaggg tgatgccctg
    19681 ctgatggcga ccaaggacat cgtgctcgat gtggcgcaca acaccgagcg cagtgacagc
    19741 gacagtcgtg gcaagggctg gggtatcgcc accaactccg ctgggttgcc gttcggcacc
    19801 aacaactcgc gcagcgatgg cgccggacag agcgacacca tcaccggaac ccagctgtcg
    19861 gtgggtggag gcgtgcgcat ggccaccacc gagggtgata tccgcctgac cgccgccaac
    19921 atcgcggccg agaaggatgt cagcatccgt gctgcgggcg acctgacgat ccgtagcggg
    19981 caggacacgg tcagcaatgc caaccgctcg gacagcaagg caatcggcac tgtgcagatt
    20041 tccgataccg agaagttctc cggctggcat cgcgaacagc atcgcgatga cagcgcgcag
    20101 gtctcacagg tggccagcac cgtcggcagc ctcggcggca acgtcaacct caccgcaggt
    20161 ggcaagtaca cgcagagcgc cagcaatgta gtggcagcca aggacgtgaa catcactgcc
    20221 gccgagatcg aactgctgac cgccgatgaa agtggtcatt actcgcagag cgacaaggac
    20281 ctgaagatcg gtgccttcgc gcgggtgaag tcgccgttga tcgacctgct caacaatgtt
    20341 gacgccgccc gcaagtccga cgaccgcctg cagaagatgc agggccttgc cgctggtgcc
    20401 aatgcctatc aggccgccag tgccatctcc agcatggccg gcaagggtgg aggcggggca
    20461 ctgctcagtg ccgaggccgg ggtcggcttc aagacctcca gcagcagtgc cgatggcagc
    20521 agccaggtct cgcgcggctc caccatccag gggggcggca acgtcaacct gaccagcacc
    20581 cagggcgaca tccacgtggt gcagggcaat ttgagcgcgg gcaacacgct cagcctggat
    20641 tcggccggtg acatcctgct ggaagcgggc caggcgcatg tggccgaccg cagcaagagc
    20701 agcaatgccg gcgccgaagt cggcgtgggc gttgcagtgg gcgctcagac cggtgtctat
    20761 gtgtacgctg aagcgagcgt cggcagcagc aagtccaatg ccgagagcag cacctggcag
    20821 aacacaacgc tgaccggcaa gaacatctcg atgaaggccg agggtgatac cacccttcgc
    20881 ggtgcgactg ccaccgccga ccgcatcgac gtcaagaccg gcggcacact gaccatcgag
    20941 tcgctgcagg acatcgccga gagcatgtcc aagaacagcc aggtgggcgg tcgcgtgcag
    21001 gtgtcgttcg gcaccgcgtg gaatgccgac ggctacgcca gtgcaggcaa ggccaacggc
    21061 agctatcagg gtgttggcca gcagagcggc ctgtttgccg gcaatggcgg gtaccacgtc
    21121 gatgcaggtc acgtgaatct ggtgggcggc gcgattgcca gcacccatgc gggtaacagt
    21181 gaactgactg cggattcgct gacgttcacc gacctgcaga accacatgga ctacaaggcc
    21241 acgtcgggca gcatcagtgg gggcttcggc agcagtggca atggcccgac ggacaagggc
    21301 gtgggagcgg ttgagcagct gcagggcatc ggcagcagca tcaaatccgg aacgttcggc
    21361 agcgtggatg gtgtcgcgtt cggcggtgga ctgccaatgc atgaaagcgg cagcgacagc
    21421 tcaagcacgc gtgcgaccct gaccgaggga accatcacca ttggcggcag gaagaccacg
    21481 gcggccgagc ttggtgtcaa taccgacgca gctgccgcac accgagcgct ggaggcgatg
    21541 cctgatgcca acaaaatgct ggccgatcag caggcgatgg cgaatgcagc aagcacggta
    21601 ctggccacca gcaagcagat cgcatcggac attggcagct acgggatcaa caagatcacc
    21661 gatgcctatc tggaggggaa gagtgccgca gagaaggagg ccttcgccaa gctcagtccc
    21721 aaggaccagt acactgccct ttccgggttt gacagctcct accctgatgc acttgtcacg
    21781 cagcagaagt gggcacccga cggtacctac ggccgtgcgc tcaacgcggt ctccaccgcg
    21841 ctggtcggca gcgtggcagg gcaggcaggt ggtcaggtca tctcgaacgc actcgcgccc
    21901 tacgctgctg agttgattgg aaagaccttc gatcccaaca agcagagcgc cgtccccagt
    21961 gaggcgatgc agatgctctc gcacgcgctt ctgggcgcgc tgcttgcgga ggcgaatggg
    22021 ggttcggcag gtaccggggc tgctgctgcc ggaggtggtg aactggcggc caaattcctg
    22081 ggtgactact acgcgcggca gaatggcgga cagctgactc cggagcagga acagcagatc
    22141 aaggcattgg gccaggcggt cggcgcgatg gcaggtggga ttggtggaga cggagccatg
    22201 ggggcggcgt tgggagccac cattgccaag aactctgtcg agaacaacta tctgaatcat
    22261 gccgagcgca tgcagttcct ggacgccatg ctgagctgca tgaagagcgg ggagcgttgc
    22321 ggcgaacaga agcagctggc ggcgctgtcg gatgcgcgca atgcggcatt gattgctgca
    22381 tgtaccgcgg ctgccgattc gcctgcctgc cgcgcagagc agtcgaaact gggtgacgcc
    22441 tactggtcac ttacccagaa tgattccacc tatctgcgat ggatcaagga caatggcctt
    22501 gatctggccc aggcggcact gacgaagggc aatggtagcc aggtcgcctc cgatctgctg
    22561 acgcatacgt cctcgctgga tgcccgttac aagatcacct gtgcagcggc agggcggtgc
    22621 gatccattca ccgccggcat gctcgcgttg aatgggaaga cgcaggaggc ggcagccaac
    22681 gctgctctga atctgctgtt cgacaaggcg ggcacgggcg caggcgtggt gaccaacgca
    22741 ggtggcatgg tcatggacat ggcgaagatg aatgccatct acatgtccat cgagagcagc
    22801 aagcaggctt ggaatgactt ccagcggatc ggcgaaattg gctactgggg tctggtcaag
    22861 gagaagagtg ccggcgcctg gtcatccatt tcaggctact tcgggaacgg ttgggatgcg
    22921 gccagctacg agcttggcct gaatcagaaa tggaacctgg ccgatgtggc agcaaacggc
    22981 ttcaccaagg gtgacatagg gctggacgtc gccctggcag tgatcagcct gggtgatgtc
    23041 accgcgatgc gtgcggcagc gaaggccagg aagctggcgg cgttggagtc aggtgccgcc
    23101 gcaaagccga ccctcaatgt tcaggagttg ttgccaaatc agaacacgcg tgttctgacg
    23161 gaatccgagg cgcgtgcgct cggtggagag aagaaggggc tcatctacgt catcgaaagc
    23221 ccgcggggca agccggcagc acgtgatttc caggccggga caaatggcgc cttcagcgac
    23281 gtggcgtccg aaaagcctgc cgttccggcg cttcgctata ctaatcccaa tgaacgtggc
    23341 gttgacttca tcaagttcga cggcatcgag gcggtcggaa atgagaaaat tcttcttatc
    23401 gatgcgaaaa ccaagctggc aatctggagt ccttccaccc agcgggaggt gctttcgaca
    23461 atgggccggg tcaggtcggc gttggagcag aatccaggat tcaaggttgt ctatgagttt
    23521 cccaacgaga aggttgcggc tgaagctcgc ttcttcattc gacaaaatgg tatggatgat
    23581 gtgatttctg tgaggacgag gaatcagtga gtactgagcg catagcaatt tatcttcagg
    23641 cacggccaga cagatccatc tcgattgccg agaggcatct ccatgtcatg gacaggatgt
    23701 cggcaatccc atgcccattg ggattccatg gtctcgagct gccgcctgta cccgactgtg
    23761 gagaagaatt gctggcaagc tatgagatca agactggact gaaaggtctg tcagtcatcg
    23821 gcacatacgc tttcaggggg cccgggtacg agtacgcgga tgtggctgcg ttggacgaga
    23881 tcatcctgta tgggttcaga agcagcaaca aggcagtgga ctatccgagt gttctgagga
    23941 atggcgtcgc ttctgttgcc gaggcgttcg gtgcgtacag agtgaaggtc acgtacggga
    24001 tgtattcgat ggactatcag gacggtgtgg gccgggaggg gccaaccctt gcagatctga
    24061 aagccgctgg agtcaaggat gtcgacggca ggaagaacat cctgacgatg taccctgccc
    24121 agttctggga cgcccggctt tgcagcgacg cgcttggatt cggacccgag gaggttttct
    24181 cccggcttga aggcaaggtt gacaaggtgg aattgacagc cagtggtgtc tacattctcc
    24241 tgagtgacaa ggttgatctt tcctatgagg agtatctgga gttcaatcgc cacgcaaagg
    24301 cgcttttggg tttgcagtag tccagagcgt gacaggatga acaggatgat ccgactctgc
    24361 ctgctgttgt gcgctctgct ggccctggcg gcctgcaccg ccaccgcgcc cgtgcagcac
    24421 aacccgcttg ccacctgggt gccatcaccc aaccagaatg cgcgcacgcc ggtcatcatc
    24481 gtcatccacc acaccgaaca gaaatcggtg cagcagagcc tgcatacgtt gcgtaccgcc
    24541 aacagcggcg ggccggtcag tgcgcattac ctgatcggcg ccgatggcca tcgctaccag
    24601 ctggtggccg acgagcgccg cgcctggcac gcaggggccg ggcgctgggg caccatcacc
    24661 gatctcaatt cagcctcgat cggcatcgag ctcgacaacg atggccgcag cccgttcagt
    24721 gcggcgcaga tcgaatcgct gatcgtgctg ctgcgcgatc tcaccacccg cctcaacatt
    24781 ccgccgcgcc aggtgatcgg acatgccgac ctggcgccga cgcgcaagca ggatccgagc
    24841 cgcttcttcc cctggcaaca gctggccgag gccggtttcg gcgtctggcc gcgcgcggcc
    24901 gatggtgccg caccggaagg cttcgatgcg tggaacgcgc tggcccgctt cggctatccg
    24961 ctggacaacc gagacgccac cgtcgccgcg ttccatcgcc gcttccgtgg ccgcgacgac
    25021 ctgccgaaga cgctggatgc tgaagacgcc cgcatcctgc attcgctgct gctgcagatg
    25081 ccgtgacccg gcgcatgaac gcttgacccc gcgctgggtt gccgcccagc ggccggcccg
    25141 ccaccatggc ggcatgatcg attccgccac cttcttcgag cgcaagcact gtgtcctgct
    25201 ggccgcggcc gtgctcgccg gctgctccac caccgctccc cgcacgggct ccgacgcccc
    25261 aacgccgccc accccgccag cggccaccta tgccaaggcc gcgtggagcg cactgccgcc
    25321 ggtttccgac agcgatctgc aggccggctt cgttgcctgg cgcagcagct gcacccgcct
    25381 gaagaccgat gcggtctggg ccaggccctg cgccacggca gcggcggttt cagacaagga
    25441 cgcggccgcg atccgccagt tcctgcagcg cgacctcgat gtctacgcgc tgcgcgccgg
    25501 gggccaccag gccgatggcc tgatcaccgg ctactacgaa ccgatctacg ccggcagcct
    25561 cacccgcacg gccaccgcga cggtgccggt gtacggcacg cccgatgacc tggtcgtggt
    25621 gcagctggac agcctctacc ccgagttgaa gggcaagcgg ctgcgcggcc gtgtcgacgg
    25681 caaggtactc aagccgtatg acgacgccgg cacgattgcc agcaaagggg ccaaggcgcc
    25741 agtcctggcc tggctgaccg atccgatgga cctgcagctg ctgcagatcc aggggtccgg
    25801 ccgggtgcgc ctggctgacg gcacgcaggt acggttggcc tatgcggaac agaatggcca
    25861 cccctaccgc gccatcgggc gctggctggt cgaccagggc caactgaaga aggaagacgt
    25921 caccatggac gcgatccgtg cctgggcccg ggccaacccc gcgcgcgtgc cggaactgct
    25981 gcgcagcaac cccagctacg tgttcttcgt gcgcaacccg gacagcccgg aaggcccgcg
    26041 tggctcgttg aacgtgccac tcaccgcagg ttacagcgtg gccgtggatc gcaccgtggt
    26101 gccgctgggc agcctgctgt ggctgtccac cacccgcccg gacggcacgc ccgtggtgcg
    26161 cccggtggct gcgcaggaca ccggcggcgc cattgccggc gaagtgcgcg cggacctgta
    26221 ctggggcagt ggcgatgccg ccggcaagct ggccggtgac atgaagcaga agggcaacat
    26281 ctggatgctg tggccgaagg gcgtagcgct gccgcagtag gtggcaggga tctgcccccc
    26341 ggatgcctga taatggcgcc attccgaact ttccggccgc acctgcggcc aggacccctg
    26401 caatgaccta cgcaaagcac aacgcaagat ccggcgcgaa atccgccgcc aagaagtact
    26461 acaagcactg ggccgaatcg ggcctgggca agggcaacgt gctgatggaa gcgcgaggcg
    26521 agaagatcgt gcgccaggtg gaaatctacg gcaccaagat ggtctgggcc gacgagcatg
    26581 cccacagcga tgaccgcttc ctgctggccg accagccggt gtcgttcctc gatttcgacg
    26641 aggacgacga gatctccgcg cgcgaattcg aaagcgcatg gaagaaagcc cgggaagcca
    26701 ccggctaccc ggtgtaacgc tgcccgcccg ggatcgggtc cctttccgaa gggaaagggc
    26761 tctgaccccg aacccgcgtt ttgcactaca ttggtgcaat gtccgactcc gcacccccgc
    26821 cgtccctcga tgccctgggc acgccgctgg cctgggccgg cgccgatggc tgcattgccg
    26881 gctgcaatcc ggccttcgcc cgctggctgg gcgtcagcgc gcgacgcctg ctgggtcggc
    26941 ccttggccgc actggaagtg cagggcgagg cactggccca tttcctggcc cgtgatgagc
    27001 gcgacagcct gcgcctgaac cggctggcgc tggccgtgcc cggcgaggcg ccgcgcttcg
    27061 ccgagggctg gatgagccgc cgcgacgatg gcggctggtt gctggaggcg cacccggtcg
    27121 atgaattccc tgggctcgat cccacccagg ccctgcccag cgcgctcagc gcggcgctga
    27181 aggggctggc ccacgagctg cgcaacccgc tggccggtct gaagggcgcg gcgcagctgc
    27241 tggcccgtcg cgcggcccag cgcgatgcca gcgaacgcga gctgatcgag ctgatcggct
    27301 cggagatcga gcgcctcaac ggtctgctcg accagctgct gtcgccggcc ccggccgcgc
    27361 cgcatgccga actgaacatc catgccgcgc tggagcgcgt gctgcgcctg gccgagaacg
    27421 aggccggctg ggcggtacgc ctgcagcgcg actacgaccc cagcattccc gaattccacg
    27481 gcgacgccga ccgcctcacc caggcggtct ggaacctggt gcgcaacgcg atccaggccg
    27541 gcgccggcag catcaccctg cgcacccgcg tggagcatgg cgtgcgcatc gccgagcagc
    27601 tgcacacgct ggcgctgcgc ctggagattg ccgacgacgg ccggggcgtg ccggaggaac
    27661 tggccgaaca cctgttcctg ccgctggtca gtggccgcgc cgaaggcact ggcctgggcc
    27721 tggcgctggc ccagcaggtg gcgcgcgagc atcgcggcac gctgacctac cgctcgcgcc
    27781 cgggccatac cgtgttcacc ctgctgctgc cgatcggcaa tggcgccgcc ccgaccgagg
    27841 aggccccgcg cgatgtctga cttctccacc gccgcacaac gcatctgggt ggtcgacgat
    27901 gaccgcgccg tgcgcttcgt gctgtgcacc gcgctgcgcg aagcgggcta ccaggtcgtt
    27961 gatttcgaca gtgccgcgtc ggcgttgcag gcgctgggcg agggtccgcc gccggccctg
    28021 ctgttcaccg acgttcgcat gccgggtgac gacggcctgg tgctgctgga caagctcaag
    28081 gctgcgctgc cgcagctgcc ggtggtggtg atgtcggcct acaccgatgt ggccagcacc
    28141 gccggcgcgt tccgcggtgg cgcgcatgag ttcctgtcca agccattcga cctggacgat
    28201 gcggtggcgc tggcgcaacg cgtgctgccg gcggtggcac cggccatggc aacgcccacg
    28261 cccgccgccg aaaccccgag cgaccagcca ccgcaactgg tgggcgatac cccgccgatg
    28321 cgcgcgctgt tccgtgccat cggtcgcctg gcacaggcgc cgctggcggt gctgatcacc
    28381 ggcgagaccg gcaccggcaa ggagctggtg gccaatgcgc tgcatcgcga atcgccgcgt
    28441 gcgcagggtc cgttcgtcgc gctcaatacc gcggcgattc ccgccgaact gttggaaagc
    28501 gagttgttcg gccacgaagc cggcgccttc accggtgcgc agcgccgcca catcggccgc
    28561 ttcgagcagg ccaacggcgg cacgctgttc ctcgacgaga tcggtgacat gccgttgccg
    28621 ctgcagaccc gcctgctgcg cgtgctggcc cagggcgagt tcttccgtgt cggtggccgc
    28681 gagctgatcc gcgtcgatgt acgcgtggtc gccgccaccc accaggacct ggaaggcctg
    28741 gtcgcacaag gaaagttccg cgccgacctg ctgcaccgcc tggacgtggt gcgcctgcag
    28801 ctgccgccgc tgcgcgagcg ccgcgaggac atcgcgcaac tggccagcac cttccttgcc
    28861 gccgccgcgc gcaagctgga tacgccgccg aaacgcctga ccgccgccgc cctgcaggcg
    28921 ctgcgcgagc atgattggcc aggcaacgta cgcgagctgg aaaacgtgtg ctggcggatg
    28981 gccgcgctgg ccgctgccga caccatcggc gtggccgatg tcgataccgc gctgaaccgt
    29041 gcacgcggcc gccgcaccag taccaacgca gccgacccgg gacagtggga agcgctgctg
    29101 gctgaatgga cacgccggca gctggccgaa ggcgtggagg ggctgcatgc gcaggtgcgc
    29161 gagcgggtcg accatgccct gctggaggcc gcgctgcaga tcacccatgg ccgccgtgcc
    29221 gaagccgctg cccgcctcgg cctcggccgc aataccctga cccgcaagct gggcgccggg
    29281 cgccgccgcg ggggccattg aacggtccct gcacgcgatc ctcgcgcccg cttgccgaac
    29341 cgttgatcgt tcgtggacga tgccgtccgt agtgtcacct gcaaggagtc ttcgatgcgt
    29401 ctgtcctttg ccatcctgcc gttgtccgcc gccgcgctgc tgtctgcctg tggcagtgca
    29461 tcgaagaagg ccgagcccac cccgccgccg ccgagcgtgg tcagcgccgc gaagcaggcc
    29521 gaggccaatc tgtcgccggc ttcggccagc atcgtcagtg gccgcatcgc gctgatggtg
    29581 gaacccggcg gcatccacat caccggcctg atcggtggcc tgcagccgat gcagcaggcc
    29641 ggtttccaca tccacgagcg cggcgactgc agcgcggtgg atgccagcag cgccggcaac
    29701 cacttcaacc ccagtggcgc cgcgcatggc cgcgccggca ccggcaagca ccacctgggc
    29761 gacatggata acctgcgtgc cgatgcccag ggccgcgcca acgtcgatat ccacctcaag
    29821 ggggttaccc ttggcggagg cgccgccacc gatatcgccg gacgtgcact ggtcgtgcat
    29881 gccaacgccg acgactatcg cagccagccc gccggcaatg ccggcgtccg catcgcctgt
    29941 ggcgtgatcc gggttgtccg ctgatcactg caggcttcat ccagggagag attgcatgcg
    30001 tctgatccac acttcgctgt ttgtcgccat cgccgcgctg ggcctggcgg cctgcggcca
    30061 gcagcctgcc gcgccgcagg ctgaaacccc gccggccgct ccggccgagg gcaccaccac
    30121 cgaaccagcg gccaccccgg caccggcagc tgcacccgcg gccgatgcgt cggccaccgc
    30181 cgaactggcg ccgacccagg gcaacgaggc caagggcagc gtcaccttca agctggtcga
    30241 cggcaaggtc catgtgaccg gccagatcac cggcctgaag ccgggcagcg agcacggctt
    30301 ccacatccac gagaagggcg actgcagcgc gccggacggc atgagcgctg gcggccactt
    30361 caacccgggc caccaggatc acggcaacgt cgccaccgat ccgcaccacg gcggcgacat
    30421 gcccaacatc aaggccgacg acaagggcgt ggccaccatc gatggcccag tatcgagcaa
    30481 cgtcaacatc ggcaagggtg atgacttcga catcatcggc cgcggcctga tcgtccacgc
    30541 cgacgcggac gactacaaga cccagccgac cggcaatgcc ggtgcgcgcc tggcgtgtgc
    30601 ggtgatccag aaggcgccgt aagtacgctt ttgctgcaaa cggaaaacgc cggcacaagc
    30661 cgg
//
LOCUS       DAOKIP010000028        30467 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.028,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000028 DAOKIP010000000
VERSION     DAOKIP010000028.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 30467)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 30467)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..30467
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.028"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..920)
                     /locus_tag="QEL58_001122"
     CDS             complement(<1..920)
                     /locus_tag="QEL58_001122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014647445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M14 family metallocarboxypeptidase"
                     /protein_id="HDS1675620.1"
                     /translation="MSQAAFYPVGTPGQPWGAAERDQWRGRQQRLRRYDQEVLPRIEA
                     LASRFDKVAYGQLDYAGEIYTLFALRSRDWNPALPAALVTGGVHGYETSGVMGALEFL
                     EKHAADYAGKANLLVAPCVNPWGFERINRWNFDAVDPNRNFRADGPARESTAVIELIA
                     PYQGQFVLHIDLHETTDSDESEFRPALAARDGKPFEPGLIPDGFYLVDDSENPQPTFQ
                     QAVIVAVEKVTHIAPADDKGEIIGSPVVAHGVIEYPLEKLALCAGITGAKYTTTTEVY
                     PDSPRATPQQCNDAQVAAVCSALDYALAHR"
     gene            1052..3133
                     /locus_tag="QEL58_001123"
     CDS             1052..3133
                     /locus_tag="QEL58_001123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent siderophore receptor"
                     /protein_id="HDS1675621.1"
                     /translation="MPINALRPAHLPLAAALALCLLPAASAFAQDGATTLDSIQVSGS
                     WLGTGLHDSVKSFAGARTVVDRQRIEASGAASIGDAMRRIPGVQVTDNSGTAGSSVSL
                     NIGVRGLTGRYSPRSTVLLDGVPLAVAPYGQPQLSFAPTSLSNIESIDVVRGGGAVRY
                     GPQNVGGIINFSTRAIPTGAGLHGEAGVRYTAYDHGGGDSTQYNAFLGGTGDNGLGAA
                     LLYSGQDGRGWRQGSDDRFNDLALKFAYAIDEQQELRAKLSYYDVRSLTPGGLTRAQY
                     EADPFQNTRPTDFWKGHRTGIDLGYTNTLSANSEFEVLAYYNESSRASSLINAANTQL
                     TVQPRDYRVLGIEPRYTQRLHWGSTVHDITAGYRFLRERGNDRSYTVTRRTGTASATT
                     RFDNATDAHAFYIDDRIAVGQWRITPGVRMEWIDMDRRQSGGSATFSSRNNKALPSLN
                     IAYLLTPQLTVFGNYTTSFGPVQNIQLNSQTASNPLNPEVAKTTELGARWQDRALRAE
                     ITVFKMRFDNQILQVPGITPPTFQNIGATDHKGVESALEYHFAEDSALAGLELYANYT
                     WTKAIQQSGDNRGLDVPFYSRDTDSVGARYALAGWTFNVSSTHQSGQFSDAANTWAET
                     ADARVGRVPGVRLWNAQVAWQVPGLGDSEIALGVNNLADKRWYTRNVDGNAGRMVAAP
                     RTFYVQGRYRF"
     gene            3154..4968
                     /locus_tag="QEL58_001124"
     CDS             3154..4968
                     /locus_tag="QEL58_001124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019337862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chloride channel protein"
                     /protein_id="HDS1675622.1"
                     /translation="MTVALTVAAYHAATMSLPVSPSRLHLAFQGLRLRLRGSDLWFIA
                     LALLVGLIAGYLTLLQSGIARWLQGALYGLDEGMRLSSLPSLTWTALLVLPLGGLLVG
                     LVSLAATRLKRPLLDAVEANALHGGRMSMRDNLIVLTQTLLSNGCGASVGLEASYTQM
                     GAGSGSQLGRVMRLRRNDVRILVGAGAAGAIAAAFGAPLAGAFYAFEIVIGAYTPAAL
                     APVAVAALAGAFVADQAGIEAYLLPAASTIDVRAADYAIYGLLGCCCAMVGIAVMRLI
                     ASIEGTVKRSPLPLWGRPVVGGLLLIPLALASPQVLSSGHGALHLDLTTHLPLIWIGG
                     LLTLKCLASGISLGFGFRGGLFFASLFMGTLVGALFAGLLAMATGVPVIDATSAALAG
                     MAALAAAVVGAPMTMAMLVLEGTHDFLLTSVVMSAVLVSSTLVRQWFGYSFSTWRMHL
                     RGETIKSARDVGWVQNLNAGRLMRKGVATAPADLDAAAFRQRFPLGSGSRVVLIDGEG
                     HYAGIVQIPRVYGDGVKPETAIGELAENRDVSLSPAADVVSVMQRFDQTQADELAVVT
                     ADGQVLGVVSEAFVRKRYAEELDKRQRELMGERVEDTD"
     gene            5072..5788
                     /locus_tag="QEL58_001125"
     CDS             5072..5788
                     /locus_tag="QEL58_001125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005416969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MgtC/SapB family protein"
                     /protein_id="HDS1675623.1"
                     /translation="MRFIETFQAGPFADTVVSLLAAFVLGTLIGAERQYRQRTAGLRT
                     NVLVAVGAAAFVDLGMRIAGSAEAVRVISYVVSGVGFLGAGVIMKEGMNVRGLNTAAT
                     LWCSAAVGSCTGADMLAEGVLLTVLIIAGNTLLRPLVNAINRIPINEAATEATYEVRL
                     SVDAEAVPRVRERLVDALEAAQYPVGDVQVVEHADAPTDVIAVLVSTAVSADELDVVL
                     ARMEHVPGVLHATWEVSTRD"
     gene            complement(5820..6227)
                     /locus_tag="QEL58_001126"
     CDS             complement(5820..6227)
                     /locus_tag="QEL58_001126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005413733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HDS1675624.1"
                     /translation="MRELDIGEVVKRSGVPASTLRYYEQLGLLQALGRRGMRRQYDEQ
                     VLERLALIGLGQAAGLSLQQIGVSLPPLRGCLTLDRDALLAQAEILQRQINQLQRIRR
                     HLQRAAACPEAQDARQCGSFRKLLRAQQRIAGG"
     gene            6291..7118
                     /locus_tag="QEL58_001127"
     CDS             6291..7118
                     /locus_tag="QEL58_001127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012480540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HDS1675625.1"
                     /translation="MASTSPVDQNALWNGPGGQVWVAQQAMLDGLFQPMADLLVSELP
                     KTVTQLLDIGCGTGASLLASAAARPEAHCTGLDISAPMLALARQRAVDAGRAADFIVA
                     DAQQYPLPPAHYDWIQSRLGVMFFEDSGAAFANLHRAALPGAGLRFIAWRGADENPFM
                     TTAERAIGDALDLPPRVPGAPGQFAFADGERVRQVLLAAGWKDVEVVAVDLPCSIARD
                     DLPTYVGQLGPLGLALRSMPEARAAALGERALAAFTPFIEGDRVRVDAACWHVSARA"
     gene            complement(7199..7501)
                     /locus_tag="QEL58_001128"
     CDS             complement(7199..7501)
                     /locus_tag="QEL58_001128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019337865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675626.1"
                     /translation="MVHAMNAQFLPLSMKTETTLSVYGQLGNHAVVRIPGRRLPGLIL
                     QADTVAGFLAQLQEAQACLRSGRAQRTDAELDMLIDVLQQWYALIESRLADAGEAL"
     gene            complement(7611..8453)
                     /locus_tag="QEL58_001129"
     CDS             complement(7611..8453)
                     /locus_tag="QEL58_001129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019337866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HDS1675627.1"
                     /translation="MKQHRIARAGHVAATLGLILGIGLLAACRSHAPAADGPAEATAV
                     HFPEASKASLKEGTYPDVADLRRFAPGMSKRQLYTLLGTPHFNEGMWGVREWNYLFNF
                     RTAQGAEYFTCQFQVRFDGKGIAQAGYWKPESCAAVLDPPRPPAPPAPPPAPLPEQPL
                     RLSADALFGFDSAKLSAEGQQAVQGILAQVREAAQVQSIRVTGYTDRIGSASYNQALS
                     QRRADAVRNALVQGGVPAGSISAEGRGAAEPIVQCEQRNRRELIACLAPNRRVQIAGM
                     AHPR"
     gene            complement(8515..14493)
                     /locus_tag="QEL58_001130"
     CDS             complement(8515..14493)
                     /locus_tag="QEL58_001130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemagglutinin"
                     /protein_id="HDS1675628.1"
                     /translation="MNRIYRRVWNRQLNALVVASELATGDSGGTAARDPRSVLLVPTA
                     LALALLCALASGHAGASESNQSLRDLQALAAKYTQPMPVKVDAEVALAAAARQAQSSP
                     AISADARVGLQLSTASLPVVRDVLPATVQVKLAAGSTPKQVAVPGLAADVRASVGLGN
                     AAVRGAQVDASLAAQVAPAAQAPLGIAADARAKAKVGVAGAQVASIDSSAKAAAGVSA
                     ASAGGLPGLKAAADGALESKLKVAGHQIDAQGQARATAAVTLPAKEEVPGETHDRAIT
                     AAFDTGVAGKVRVQAPDGQEVVADRNLKLAGQATVAAQNSALGVGGLVGGMVGAAGNA
                     VGGALNGTVGSVGGALGGTLNNTVGAVGGALNGTVGTVGSAVGGALNGTVGSVGGAVG
                     GTLNNTVGAVGGALNGAVGTVGSALNGTVGNVGGAVGGTLNNAVEAVGGALNGTVGMV
                     GSAVGGALNGTVGSVSGTLNNTVGAVGGAVNGAVGTVGAVGGAVGGALNGTVGSVGGA
                     LGGTLNNTVGAVGGALNGAVGTVGAVSGAVGGALNGTVGSVGGALDGTLNNTVGAVGG
                     ALNGAVGTVGAVSGAVGGALNGTVGNVGGAVGGTLNNTVGAVGGALNGAVGTVGGALN
                     GTVGNVGGAVGGTLNNTVGAVGGAVNGAVGTVGAVGGAVGGALNGTVGNVGGAVGGTL
                     NNTVGAVGGALNGAVGTVGAVGGAVGGALNGTVGNVGGALGGTLNNTVGAVGGALNGT
                     VGTVGGAVGGALNGTVGTVGSAVGTVGSTVGGVLNGATGGSTGGLGGVLGNTLGNVGS
                     AVGNLLNGNLNGTLGNLGSAVGGLVGGTLGGLGLTKPSAIPPTSPKAPAAADPNAGLI
                     IGTGGLVGNVGQLIGPTTTSLFGGNGYLSNGNLKLSNANVMQTYSTVNVLGLPVVNLS
                     PVGSTLNGLGGAVTGGSSHLTLIGGVTSDSYIYNINNGNPGGLLGLLLPKDSPAWAAK
                     CLDIALADISCWAVNAAQDYQVLMGDGAFANGSKEVVIGANARHELPKVDANVAFPGA
                     GTNDPSNPTGVPTADYAARMGHSVIVGDSAVGTANGQTLLGAEATSNQANSVALGYRS
                     AALRGAQASYSAYGLTAPQVSAGEVSVGTAGGGERQITNLAAGSANTDAVNVAQLKGA
                     ISLINGVADVAVTYDLDGAGNPNYRRVTLGAGTGTTTIGNLADGAVTAGSLEAVNGGQ
                     LAGTNAAIASFFGGRAAFDPATGAFTAPLFEISTISTGGAIAKGLYTNATDAFAAVDG
                     SLVNLNTQITDIRNGGTKYLRVNSTGTEAVASGTDSIAVGTNARATAANSIAVGAGSL
                     ADRANSVSIGAAGAERQVTNMAAGTAATDAVNVGQLQAAAAGALRYDLNGDGSVNYAS
                     ATLGQGGTATTLRNLGPGQVSATSSEAINGAQLFAANQAVATHLGGGAAVNASGVLTA
                     PTYSINNIAANGTITKGSYNDVGTAFDAVSNSLANVADQTGEIDKLAVKYDVDGSGNV
                     INSVSLKGTGTGTVKVTNVAAGSILAGSSDAITGDQLFSTHSTIANYFGGSTAFNGTT
                     NVWTAPKFSISSIATDGSFTSGDYNNVTAAFNAVDGSLKVLNQRITNGAGGSAYLAVN
                     STAAAATAAGAEAVAVGPQASAAGANSVAVGNGASSSAGNSVALGAGSVASVGAQSGY
                     TGAYGQTGASNSAGEVSVGSSGSERKITHVADGSDDHDATNVGQLKNGVNYAIDQSKS
                     YTDQKIKNITNVAGSFRANNTNNLADPSASGANSAAGGAGSTAAGANSTALGNGSQAQ
                     ADNSVALGAGSVANRANTVSVGAAGAERQVVNVADGSQATDAVNVRQLQASQQGTIRY
                     DTTVNGATNFNSVTLGSTSSGPTTVRNVAAGTAGNDAVNVDQLKSGMAQTLDWSKAYT
                     DERMGGFERDLRKTDNRASAGIASAMATAALPQPSEAGRSMASIAAGSYNGESGVALG
                     ISGVSEGGRWIYKFSGSTNSRGEAGVAVGAGIQW"
     gene            complement(14729..15709)
                     /locus_tag="QEL58_001131"
     CDS             complement(14729..15709)
                     /locus_tag="QEL58_001131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008267818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDS1675629.1"
                     /translation="MVDGGVGDSDDSGLRSIDLATLSGVLRVCDVELLLLDGNGPRAA
                     FASRVHEEALFCSISCGFHCRGRFMLPPDWAMLGYLHATDETLSWCHGIPLTPGMALT
                     VMPEGISEFTLSPGTHLTLMLVPVARVQRKLTELSLRSTPPAGQALSLFNLSSESAPL
                     ARHYQQLHVQLGQGGNLEPEEAERLLHEHVQALLGAGASDRPGCSRARRTHYLIAQRA
                     ENFMRLNLRRNIYMNEICDAAGVSERGLRYAFEDLFGTSPNRYLSMLRLCAACRSLSM
                     ADSSRRSVKAIALSCGLWDLSRFADNYRKVFGELPRDTLMRAPAQIGQPA"
     gene            16396..16584
                     /locus_tag="QEL58_001132"
     CDS             16396..16584
                     /locus_tag="QEL58_001132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005413737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Flp family type IVb pilin"
                     /protein_id="HDS1675630.1"
                     /translation="MNASIRTFLKEEDGVTALEYGLLAAVIAGVLIAVGRTQITSFFT
                     TLFTHLTDIAKDATTAAK"
     gene            16690..17235
                     /locus_tag="QEL58_001133"
     CDS             16690..17235
                     /locus_tag="QEL58_001133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010485142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase"
                     /protein_id="HDS1675631.1"
                     /translation="MTLLGLLAIGVCLRIAISDLYARRVPNAWLLAACALAVPLLIAG
                     QFSTPRLPWGSHVAGAALGLVALLPFYAVRWMGAGDVKFFAVLGLLLGLEALLPIWVV
                     ASLAAGLHALVVLASRRLGPMLPAGLQLQMTRASSQWQTHPALRELQSARQGRHGIPY
                     AAYLALSAIGWIIIQVYGGVS"
     gene            17232..17708
                     /locus_tag="QEL58_001134"
     CDS             17232..17708
                     /locus_tag="QEL58_001134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008264826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein"
                     /protein_id="HDS1675632.1"
                     /translation="MNTRSPRRQRGVASIEFALMLMLGLLPLLLFTFTGVMIMAAQQT
                     LATASAEGARASLRYGTNAQRRTAACVAARNSMQWLLQFSKQDVDCSAGGSNAIVVAA
                     PAPCAGLPAAQCITVTVSYDYAGHPFLPGTATLYGWVMQAPIRSVAVAQLDLGSGT"
     gene            17732..18763
                     /gene="cpaB"
                     /locus_tag="QEL58_001135"
     CDS             17732..18763
                     /gene="cpaB"
                     /locus_tag="QEL58_001135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005413740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Flp pilus assembly protein CpaB"
                     /protein_id="HDS1675633.1"
                     /translation="MLKLTRIAAVALIGLAVLLAVIALMIGRKPDAPVHVAPVTSADP
                     QAITVVEAVARLPAGEPITANGLRLAQRTTPVAGAATSISTVVGKVPVQDIAEGSAIS
                     TSALAQGFSLQLRPGERALAVPVDELVGAGNRILPGDFVDVFLNLRTAQPSAGGPGEA
                     AQARLLLSRLRVLSYGQQDIAPNPGDTAASTDGSDRNDARAADITGSSHGASDESRQP
                     ARSAVLAVPVADANRLLLGAQQGKLFLALRNPADTGLPDLALFPQARGVIDPLRGLDA
                     EQQVALQRPENHAFAGIDGDALAGRGAAPTRVNPQAAPRAPAVRHGAPRASGIEIIRG
                     DSSAPRGSL"
     gene            18782..20140
                     /locus_tag="QEL58_001136"
     CDS             18782..20140
                     /locus_tag="QEL58_001136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005416985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II and III secretion system protein family
                     protein"
                     /protein_id="HDS1675634.1"
                     /translation="MTQRRLSPRPSPRQRWLALMLVLLAPATSVAADDLVLQAREQRP
                     WSLPADLERVAIADPGVADIVMLRGQRQALLVGKAPGTTTLLLWHRKQAEPQRVQVRV
                     QSAVQGAASTGTSGLLFTQQDHQGLLQGSTDSVLAHMQEQQTAAMALGKEGQLADAST
                     VSSGGVVQVEVKVVEFNKTALKQIGISFQNRNGSFAYGIARPGGQLPGNTGILPGMKE
                     GESGNESTSPISSAFRLVFGSTKGLWNADVDLLQSNGMARVLAEPTLVALSGQSASFL
                     AGGELPILEPQGLGTTTITYKPFGIGLTVTPTVLAPNRIALKVAPEASDLDYSNSIAL
                     NGVQIPSITTRRADTTVELGDGESFVIGGLVSSNVVSSVNKIPLLGDLPIIGSFFRNF
                     DYKRQDKELVIIVTPRLVQPLARNTELPLPGAREAKPNLPEWGSWLLGPISQDPVPGF
                     SR"
     gene            20168..21424
                     /locus_tag="QEL58_001137"
     CDS             20168..21424
                     /locus_tag="QEL58_001137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HDS1675635.1"
                     /translation="MPYATAQPLHPQGPPMNLVLYGMDRELLPRLAAKLPPTTTLHWQ
                     DSNAPTSAQDLQRGGQSLVLLDFRPEHAAASSALAQQLQQTQPDLVLVAVGATSAGQV
                     EGVVIALRAGLRDVLDLDSDNAGIEAALRRALSPRPAASPQLAHKARLIVLLGVRAGV
                     GTSTLAAHLSVLAQQTRTLAQGEALQQDGLLMELAQPSGDLALYLNLDSRFHYEDALR
                     NASRIDATLARTAMARHDSGLVLLDRAGGSDAVPPSDPGALLQRLRAVFASVLCDAGG
                     CPLRQLPPLLLDQADEIWLVTDASIATLVSLDQALKHLAGQREREKRLQLVINRHDDS
                     SGMSPEQIARRFEVPLLATLPERPRVRLAASQGHLLLQDAPRDPYLRALAPLVSRLDP
                     AACPVQAQGLRERLSLALGGSQWKTR"
     gene            21409..22758
                     /locus_tag="QEL58_001138"
     CDS             21409..22758
                     /locus_tag="QEL58_001138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CpaF family protein"
                     /protein_id="HDS1675636.1"
                     /translation="MEDKVTPFPHAATRPVLPDTPPGHLPFAQTEQYQKVLSAAHEHL
                     LNSIEDERIDIDSWAPDTIARWVQVQTVGFIQEWRIPINEEEMQVVAEGLVKELTGFG
                     PLDDLLHDPSIEDILINGFKDVHVSQGGQLKRATQRFTDDTHLLRILRRILAPLGRRL
                     DDSNPMVDARLPNGGRLNAIISPLAVDGPMVSIRKFRKDPFTPDELLAKGTFDAPMQA
                     LLKAMVLGRCNILVSGGTSSGKTSLLNALASYVPPNERVITVEDTAELSLNHPHVVRL
                     ESRIGGAEGHGAVSIRDLVRNSLRMRPDRIVVGEVRGAEVLEMLQAMNTGHDGSMATI
                     HANSPRDCLYRIEMLAGFAGFQGSEDSLRRQIASAIDFIVQISRLGSGRRVLVSITEI
                     TGVSDNLITTQEMFRHELQIDANGREIDRWIGLGFQPHSHKLEPFRQLLRESLYGDY"
     gene            22761..23717
                     /locus_tag="QEL58_001139"
     CDS             22761..23717
                     /locus_tag="QEL58_001139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005413743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HDS1675637.1"
                     /translation="MGTGLLLGVLSIISVLLALAAWLWGTASTREQRQASLQHAEQQL
                     ARGNTATSPSAGIASAAANEPARPASSGRRPLPWNGLLQRAGLQAGWKLPVMLLVPGL
                     VLSLTAMLRLGTAWMFPLTLLLYALGCWLWIMRRTTRLRAQLLHQLPDFLDNLVRLTA
                     LGNSLQAAFQVASMQTSAPLRGLLDTTVRYARSGMDLDRALSLAAQPYRMDVLKVLSV
                     VIGVSVRIGGRSDQILQRMGDFMRDLEQAQQELAATTSETRMSAWVLGLLPPASAVLM
                     AIASPDFFQPVLHEPLGHKVLLIALGLELVGAFLLYRLAKSL"
     gene            23746..24681
                     /locus_tag="QEL58_001140"
     CDS             23746..24681
                     /locus_tag="QEL58_001140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HDS1675638.1"
                     /translation="MSASTWFALSLLVLAAGVALLGFAGWVRSHREQRTSATLKTALQ
                     PRDEAREVEATGRDSLGWLERFGRALSGGRLEAALLANEDRLLLDLAGWNTRRGTAIY
                     LGVRLLLALLVLALALAFSEATGLAKIMVVIGALAAGLLLPKFALSAWVKRRRRAVEN
                     ELPLLIDLLRLLQGVGFSMDQSLQTLGDKLRDALPILGGELQEANVAYTHGRTRAQSL
                     RRLSDVYGDDDLSSLVQLILQVHAHGGAVQEPLRQFSIRLREQRRNSLKEKVGKLSVK
                     MTVVMMLTLLPALMLVLAGPALVALAATMSSMGTT"
     gene            24681..25562
                     /locus_tag="QEL58_001141"
     CDS             24681..25562
                     /locus_tag="QEL58_001141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012480551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Flp pilus assembly protein TadD"
                     /protein_id="HDS1675639.1"
                     /translation="MPALRTACLLFALAAVASGCASTTPKYLRAPSLAAPEPAPQDSR
                     NAYLELIARMQQQGAWYASLAHVDAFRQRYGDRPALRLLQADALRETGQTDAAIALYR
                     ELSTGPQAAAAAHGLGLIAAHRDDDDGSEQALARATQLEPLNTDYLGDLGYARLRAGQ
                     FDQAREPLAKALELSPGNAKATANLALWAVLRGDTATAERLAQQANLNEDSRRGIQQQ
                     AEQIRARLQQRQAAAAAREVAAPRAVAGPPARPQAAARLAAEARRDARDERNPQRLPP
                     SMLERFSPPDQPTGNTP"
     gene            25559..26029
                     /locus_tag="QEL58_001142"
     CDS             25559..26029
                     /locus_tag="QEL58_001142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008267662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3613 domain-containing protein"
                     /protein_id="HDS1675640.1"
                     /translation="MIKPHLTRRLLPALSGLLLATAAQAQQQPLTGQMLGGARPAATA
                     AQPLQSETLATVDVSVPEARVPVPAPAPPPAYHVASTAAAPAPAVRRSEIGDATRSLF
                     QLQASGQQAGPRLPILGDQATLSYARYLKSFQHEIPDFFETDVGKSKGTSSSGR"
     gene            26038..28191
                     /locus_tag="QEL58_001143"
     CDS             26038..28191
                     /locus_tag="QEL58_001143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675641.1"
                     /translation="MKRPRQFSFNRPRGGMSVTMMLVMLVLLAMLGLVEIGYLFWAKR
                     DAQKVADLAALAGAQRLELCTSDNSDNSAARQSALTQNRFAGSLQIRCGNWSATRGTT
                     NRFQGTVDAANPRNAVQVIAQRSVLPFFGQNTSLPTVSVQAVARRSEPTAVFAVGSQL
                     LRTRGDSLLMSTLRLIGLDVTNATVLSYDGLAQANVTPSGLLKALNIPVSANLSVADF
                     NRLLAVNKISLAQLVDATATVVGRDTTVGVQLRALSDLVATRLDITKLNIALGSESGG
                     GGLFAEVISPDGTAGSALESKISVLNLISTAISIANEGNGIAIGGLNLLGINVQAGVV
                     EPPSIAIGGVGSRAYNAQVRLMADVDSNNLFALGPLLQLLGTRLHLPVHVDVANAMGT
                     LTGIQCGGTSPQATIQVDSSVLRACVGNVDPAQRFSKNNVCDNTLQKEQLLTLLGQPL
                     INDKITLPALTSSQNLTLAAGESGSTQINPLALGNAVSDLVNELLRVLSGMLSSPKQG
                     MSANDTAKALADRYLQATFPPNTRYDVNKLIPLLRDGDPSRQLAPLNSWNVPGGLPYA
                     CGLLNLVTCHKDGPVWDAFKVTVTGQGLGVLDGLLGSLVGGLLINRCDSLLGNLIDYN
                     GCVRNNLASYIQTAPAGFLDGSGGNGVSNPDGSVSCSGLLCTLLKPILAALRPVLNSV
                     GTLLTNLLASVLGLELGRTDVNVQSIQCSAAQLVY"
     gene            28291..29004
                     /locus_tag="QEL58_001144"
     CDS             28291..29004
                     /locus_tag="QEL58_001144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2968 domain-containing protein"
                     /protein_id="HDS1675642.1"
                     /translation="MRETSGGAVFARQARGAAMLAVAMMLVAPAAMAARGDREAAAEP
                     AARTAPVVRNTVDELKQLMDSRQLTELRTTYNGNYGASLLFNANTLTYYVALFQEKNF
                     WRVIKTDAVDNAERVYRTFAQQSEQLAQVYIDTTRLEAGKRYTERLVAYNEERLRTLQ
                     QEMEQQQAQSAQVSAALQQAQQQAVSLSTDVQSTNSQLDALQRRIQILQAEQGNPELS
                     LPKPDSVPSPAPAAASDGR"
     gene            complement(29071..29457)
                     /locus_tag="QEL58_001145"
     CDS             complement(29071..29457)
                     /locus_tag="QEL58_001145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675643.1"
                     /translation="MPRLPCCLLVCLLLSAAVGAQTHVYKCVDGAYPVYQQTPCQGRA
                     EWRWDVPAEQSLSRGPVPATSTAAPARRRASRPGRARAALIPISADPAACERARQQRG
                     KALARARRLDFVQRRQLDDAVHDACR"
     gene            29644..>30467
                     /locus_tag="QEL58_001146"
     CDS             29644..>30467
                     /locus_tag="QEL58_001146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011347416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDS1675644.1"
                     /translation="MSNYVTVADGARIFYKDWGSGQPIVFAHGWPLSSDAWDPQMLFM
                     GQNGYRVIAHDRRSHGRSSQTWDGNNMDTYADDLAAVIDALDLKEAILVGHSTGGGEV
                     ARYIGRHGSKRVAKVVLVGAVPPLMLKTAGNPAGTPLEVFDGIRKGTGGDRSQFFKDL
                     ATPFFGANRDGNSVTQGMRDSFWLQGMLGGVKGQYDCIHEFSEVDYTGDLKKIDVPAL
                     VVHGDDDQIVPFDASAKLSSQIISDAELKVYAGAPHGLTVTHADAFNADLLAFARK"
BASE COUNT         4912 a        10736 c         9917 g         4902 t
ORIGIN      
        1 caacgatggg cgagcgcgta gtccagggcc gagcacaccg cggccacctg tgcgtcgttg
       61 cactgctgcg gcgtggcgcg cgggctgtcc gggtagacct cggtggtggt ggtgtacttc
      121 gcaccggtga tgcccgcgca cagcgccagc ttctccagcg ggtactcgat cacgccatgg
      181 gcgaccaccg gcgaaccgat gatctcgccc ttgtcgtcgg ccggggcgat atgggtgacc
      241 ttttccaccg caacgatcac cgcctgctgg aacgtcggct gcgggttctc gctgtcgtcg
      301 accaggtaga agccgtcggg aatcaacccc ggctcgaacg gcttgccatc acgcgccgcc
      361 agggccggac ggaactcgct ctcgtcgctg tcggtggttt catgcaggtc gatgtgcagc
      421 acgaactggc cctggtaggg cgcgatcagc tcgatcacgg cggtcgactc gcgggccggg
      481 ccgtcggcgc ggaaattgcg gttggggtcg accgcatcga agttccagcg gttgatgcgc
      541 tcaaagcccc acgggttcac gcacggtgcc accagcaggt tggccttgcc ggcatagtcg
      601 gcggcgtgct tctcgaggaa ctccagcgca cccatcacgc cgctggtctc atagccgtgc
      661 acgccaccgg tgaccagcgc cgccggcagg gccggattcc agtcacggct gcgcagggca
      721 aacagggtgt agatctcacc cgcgtagtcg agctggccat aagccacctt gtcgaagcgc
      781 gaggccagtg cctcgatgcg cggcaacacc tcctggtcat agcgacgcag gcgctgctgg
      841 cggccacgcc actggtcccg ttccgccgct ccccacggct ggccaggggt tccgacgggg
      901 tagaaagcgg cttgggacat ggcggatctc agcgagtcag gaagcaatcc atcactctac
      961 cacccggtca tcggcatgaa ccgcagacgc attccattgg cgaatggaat cagcaataat
     1021 tctcatttac gaccttccac gacctgcgcc gatgcccatc aacgccctcc gaccggccca
     1081 cctgccgctg gccgccgccc tcgccctgtg cctgctcccg gccgccagcg ccttcgccca
     1141 ggacggcgcc accacgctgg acagcatcca ggtctccggc agctggctgg gcaccggcct
     1201 gcacgacagc gtcaagagct tcgccggcgc ccgcactgtg gtcgaccgcc agcgcatcga
     1261 ggccagcggc gcggccagca tcggcgatgc catgcgccgc atccccggcg tgcaggtcac
     1321 cgacaactcc ggcacggccg gcagttcggt gtcgttgaac atcggcgtgc gcggcctcac
     1381 cggtcgctat tcgccgcgct ccaccgtact gctcgatggt gtgccactgg cggtggcgcc
     1441 gtatgggcag ccgcagctgt cgttcgcccc gaccagcctg tccaacatcg aatcgatcga
     1501 cgtggtgcgc ggcggcggcg cggtgcgtta cgggccgcag aacgtgggcg gcatcatcaa
     1561 cttcagcacc cgcgccattc cgaccggcgc cggcctgcac ggtgaggccg gtgtgcgcta
     1621 caccgcctac gatcacggcg gtggcgacag cacccagtac aacgccttcc tcggcggcac
     1681 cggcgacaac gggctgggcg ccgccctgct ctactccggc caggacggcc gcggctggcg
     1741 ccagggcagc gatgatcgct tcaacgatct cgcactgaag ttcgcctacg ccatcgacga
     1801 acagcaggag ctgcgtgcca agctgtccta ctacgatgtg cgctcactga ctccgggcgg
     1861 cctgacccgc gcgcagtacg aggccgatcc gttccagaac acccgcccca ccgatttctg
     1921 gaagggccat cgcaccggca tcgatctggg ctacaccaac acgctgtcgg ccaacagcga
     1981 gttcgaggtg ctggcctatt acaacgagag cagccgcgcc agctcgctga tcaatgccgc
     2041 caacacccag ctgaccgtgc agccgcgcga ctaccgcgtg ctcggcatcg agccgcgcta
     2101 cacccagcgc ctgcactggg gcagcaccgt gcatgacatc accgccggct accgtttcct
     2161 gcgcgagcgc ggcaacgatc gcagctacac cgtcacccgc cgcaccggta cggccagcgc
     2221 caccacccgc ttcgacaacg ccaccgacgc ccacgcgttc tacatcgacg accgcatcgc
     2281 ggtcggccag tggcggatca ccccgggcgt gcgcatggag tggatcgaca tggaccgccg
     2341 ccagtctggc ggcagcgcga ccttcagcag ccgcaacaac aaggccctgc cctcgctcaa
     2401 catcgcctac ctgctgaccc cgcagctgac cgtgttcggc aactacacca cctcgttcgg
     2461 tccagtgcag aacatccagc tgaattcgca gaccgccagc aacccgctga acccggaagt
     2521 ggccaagacc accgaactgg gcgcgcgctg gcaggaccgc gcactgcgcg cggaaatcac
     2581 cgtgttcaag atgcgcttcg acaaccagat cctgcaggtg ccgggcatca ccccgccgac
     2641 cttccagaac atcggcgcca ccgaccacaa gggcgtggaa agcgcgctgg aataccactt
     2701 cgccgaggac agcgcgctgg ccgggctgga gctgtacgcc aactacacct ggaccaaggc
     2761 gatccagcag tccggcgaca accgcggcct ggacgtgccg ttctattcgc gcgacaccga
     2821 cagcgtgggt gcccgctacg ccctggccgg ctggaccttc aacgtttcca gcacccacca
     2881 gagtggccag ttctccgatg cggccaacac ctgggccgag accgccgacg cgcgcgtggg
     2941 ccgcgtgccc ggcgtgcgac tgtggaacgc acaggtggcc tggcaggtgc cggggctggg
     3001 cgacagtgag atcgcgctgg gcgtgaacaa cctggccgac aagcgctggt acacccgcaa
     3061 cgtcgacggc aacgccgggc gcatggtggc cgcgccgcgc accttctacg tgcagggccg
     3121 ctaccgcttc tgaggcgata accgcccgat gcagtgacgg tggcgctcac ggtggcggcg
     3181 tatcatgccg ccaccatgtc actgcccgtt tcaccatcgc gcctgcatct ggccttccag
     3241 ggcctgcgtc tgcgcctgcg tggcagcgac ctgtggttca ttgcgctggc gctgctggtc
     3301 ggcctgatcg ccggctacct gaccctgctg caatcgggca tcgcgcgctg gctgcagggc
     3361 gcgctgtacg gcctggacga aggcatgcgg ctgagctccc tgccctcgtt gacctggacc
     3421 gcgctgctgg tgctgccgct gggtgggctg ctggtcggcc tggtcagcct ggccgcgacc
     3481 cggctgaaac gccccctgct cgatgcggtg gaagccaatg ccctgcatgg cggccgcatg
     3541 tcgatgcgcg acaacctgat cgtgctgacc cagaccctgc tgtccaacgg ctgcggtgcc
     3601 tcggtcgggc tggaggcgtc gtatacgcag atgggcgccg gcagcggctc ccagctgggc
     3661 cgggtgatgc gcctgcgccg caacgacgta cgcatcctgg tcggcgccgg cgccgccggt
     3721 gccatcgccg ccgccttcgg agcaccactg gccggcgcgt tctacgcctt cgagatcgtc
     3781 atcggtgcct acaccccggc cgcgctggcg ccggttgcgg tcgccgcgct ggccggcgcc
     3841 ttcgtggccg accaggccgg catcgaggcc tacctgctgc ccgccgcctc gacgattgat
     3901 gtccgcgccg ccgactacgc catctacggc ctgctcggct gctgctgcgc gatggtcggc
     3961 atcgcggtga tgcggctgat cgcctcgatc gaaggcacgg tcaagcgcag cccgttgccg
     4021 ttgtggggcc gcccggtggt gggcggcctg ctgctgattc cactggcgct ggccagcccg
     4081 caggtgctgt cgtccggcca tggcgcgctg cacctggacc tgaccacgca cctgccgctg
     4141 atctggatcg gcggcctgct gaccctgaag tgcctggcct cgggcatctc gctcgggttt
     4201 ggcttccgcg gcggcctgtt cttcgcctct ctgttcatgg gaaccctggt cggcgccctg
     4261 ttcgccggcc tgctggccat ggccaccggg gtgccggtga tcgacgccac ctccgccgca
     4321 ctggccggga tggcggcgct ggccgccgcc gtggtcggcg caccgatgac catggccatg
     4381 ctggtactgg aaggcaccca cgacttcctg ttgaccagcg tggtgatgag cgcggtgctg
     4441 gtctccagca cgctggtacg gcagtggttc ggctactcgt tctcgacatg gcgcatgcat
     4501 ctgcgcggtg agaccatcaa gagcgcccgc gacgtgggct gggtgcagaa cctcaacgcc
     4561 ggccggctga tgcgcaaggg cgtggcgacc gcaccggccg acctcgacgc tgccgcgttc
     4621 cgccagcgct tcccgctggg ttcgggcagc cgggtggtgc tgatcgatgg cgaaggccac
     4681 tacgccggca tcgtgcagat cccgcgcgtc tatggcgatg gcgtgaagcc ggagaccgcg
     4741 atcggcgaac tggccgagaa ccgtgacgtg tcactgtcgc cggccgcgga cgtggtcagc
     4801 gtgatgcagc gcttcgacca gacccaggcc gacgaactgg ccgtggtcac cgccgacggc
     4861 caggtgctcg gcgtggtctc cgaagccttc gtgcgcaagc gctacgccga ggaactggac
     4921 aagcgccagc gcgaactgat gggcgagcgc gtcgaggaca ccgactgacc ccacaaaaag
     4981 gggacagagg ggattaagtc gtttccggca catctggata tccacgcgtt ggcgtggaac
     5041 tactgtcact tccaccgggt agactcgggc catgcgcttc attgaaacct tccaggccgg
     5101 ccccttcgcc gacaccgtgg tcagcctgct ggccgccttc gtactgggca cgctgatcgg
     5161 cgccgagcgc cagtaccggc agcgcaccgc cggcctgcgc accaacgtac tggtcgcggt
     5221 gggcgcggct gccttcgtcg acctgggcat gcgcatcgcc ggcagcgccg aggcggtgcg
     5281 ggtgatctcc tacgtggtct ccggcgtcgg cttcctcggc gccggcgtga tcatgaagga
     5341 aggcatgaac gtgcgcggcc tgaataccgc cgccacgctg tggtgctcgg cggcggtcgg
     5401 cagctgcacc ggtgcggaca tgctggcaga gggcgtgctg ctgacggtgt tgatcattgc
     5461 cggcaacacc ctgctacggc cgctggtgaa tgcaatcaac cgcatcccga tcaacgaggc
     5521 ggcgaccgaa gcgacctacg aggtgcgact gagcgtggat gccgaagcgg tgccacgcgt
     5581 gcgcgagcgg ctggtcgatg cgctggaggc cgcgcagtat ccggttggcg atgtgcaggt
     5641 ggtcgaacat gccgacgcgc ccaccgatgt gatcgcggtt ctggtcagca ccgccgtcag
     5701 cgccgatgaa ctggacgtgg tgctggcgcg gatggaacat gtgccgggcg tgctgcacgc
     5761 cacctgggaa gtcagtaccc gcgattgatt catccacgca tggcgtggat gcgcttctct
     5821 caccctcccg cgatgcgctg ctgggccctc aacaacttgc ggaatgagcc gcactggcgc
     5881 gcatcctgcg cctccgggca ggccgccgca cgctgcaggt gccggcgtat ccgctgcagc
     5941 tggttgatct gccgctgcag tatctcggcc tgtgccagca gggcgtcccg gtccagcgtg
     6001 aggcatccac gcaggggcgg cagcgatacc ccgatctgct gcagcgacag cccggccgcc
     6061 tggccgaggc cgatcagcgc cagccgttcc agcacctgct cgtcgtactg ccggcgcatg
     6121 ccgcgacggc ccagggcctg caacagcccc agctgttcgt agtagcgcag tgtcgaggcc
     6181 ggcacgccac tgcgcttcac cacctcgccg atatccagtt cacgcatggg cttgacctca
     6241 agtcgccttc aagcgccaac ctatgggcaa cttccctgca aggcaaggcc atggccagca
     6301 catccccggt tgatcagaac gcgctctgga atggccctgg cgggcaggta tgggtcgcgc
     6361 aacaggccat gctcgatggc ctgttccagc cgatggccga tctgctggtc agcgagctgc
     6421 cgaagaccgt cacgcaacta ctggacattg gctgcggtac cggcgccagc ctgctcgcgt
     6481 ccgcggcggc gcgaccagag gcgcactgca ccggcctgga catctccgcg ccgatgctgg
     6541 cgctggcccg tcaacgtgcc gtcgacgcag gacgggcggc ggacttcatc gtggccgatg
     6601 cgcagcagta tccgctgccg ccggcacact acgactggat ccagtcgcgg ctgggcgtga
     6661 tgttctttga ggacagcggc gcggccttcg ccaacctgca ccgcgcggcg ctgcccggcg
     6721 ccggccttcg tttcattgcc tggcgcggcg cagacgaaaa tccattcatg accaccgccg
     6781 agcgcgccat cggcgatgcg ctggatctgc cgccacgcgt gcccggcgct ccgggacagt
     6841 tcgccttcgc cgatggcgaa cgcgtgcggc aggtgctgct ggcggccggc tggaaggatg
     6901 tggaggtggt cgcggtggac ctgccctgct cgatcgcccg tgatgacctg ccgacgtacg
     6961 taggccagtt gggcccgctg ggactggcgc tgcgctcgat gccggaagcc cgcgccgccg
     7021 cactcggcga gagggccctg gcggcgttca cccccttcat cgagggcgac cgcgtgcgcg
     7081 tggatgccgc ctgctggcac gtaagcgccc gcgcctagaa aaaagggacg gaggggatta
     7141 agtcgttctt gccccggcag tgccggaaac gacttaatcc cctccgtccc cttttttcct
     7201 acagcgcctc gccggcatcg gccaggcgcg attcgatgag cgcgtaccac tgctgcagga
     7261 cgtcgatcag catgtccagc tcggcatcgg tacgctgcgc gcggccgctg cgcaggcagg
     7321 cctgggcttc ctgcagctgg gccaggaacc ccgccacggt atcggcctgc aggatcaatc
     7381 ccggcagccg ccgcccggga atacgcacca cggcgtggtt gccgagctgg ccgtacacac
     7441 tcagtgtggt ttccgtcttc attgaaagag gcaggaattg ggcattcatc gcgtgcacca
     7501 tggaaaacct gagccgccgg caggcgtgga tgacggggga gacgttgcca cgtcctgccg
     7561 acggtcaggg gggactcgga atgccggggt catgccccgg cgcaggaatc tcagcgcgga
     7621 tgggccatcc cggcgatctg cacccgccga ttcggtgcca ggcaggcaat cagctcgcgg
     7681 cggttgcgct gctcgcactg cacgatcggc tcggcggccc cgcggccttc ggcactgatg
     7741 ctgccggcag gcaccccacc ctgcaccagt gcgttgcgca cggcgtcggc gcggcgctgc
     7801 gacaacgcct ggttgtagct ggcgctgccg atgcggtcgg tgtacccggt cacccggatc
     7861 gactgcacct gcgccgcctc gcgcacctgc gccaggatgc cctgcaccgc ctgctggcct
     7921 tcggcgctga gcttcgcact gtcgaagccg aacagtgcgt cggcagacag acgcaacggt
     7981 tgttccggca atggcgccgg tggcggtgcc ggcggcgcgg gcggacgcgg tgggtcgagc
     8041 acggccgcgc acgattccgg cttccagtac ccggcctggg caatgccctt gccgtcgaag
     8101 cgcacctgga actggcaggt gaagtactcc gcgccctgcg cggtccggaa gttgaacagg
     8161 tagttccatt cacgcacgcc ccacatgcct tcgttgaagt gcggcgtgcc cagcagggtg
     8221 taaagctggc gcttgctcat ccccggcgca aagcggcgca gatcggcgac gtcgggatag
     8281 gtgccttcct tcagcgaggc tttcgatgcc tccgggaagt gcacggcggt ggcttcggcg
     8341 gggccatcgg cggccggcgc atggctgcgg caggcggcca gcaggccgat tcccaggatc
     8401 agtcccagtg tcgcggcaac gtggccggcc cgggcgatgc gatgctgttt catgtcattc
     8461 cccctgttga cgtttccgcg atgccgggcc gccgcggcgg cccggcggcg gtgatcacca
     8521 ctggatgccg gcaccgacgg ccacaccggc ctcgccacgg ctgttggtgg aaccactgaa
     8581 cttgtagatc cagcgcccgc cttcggagac accggagatg cccagcgcca cgcccgattc
     8641 gccgttgtag ctgccggcgg cgatcgaagc catgctgcgg ccggcttcgc tgggctgcgg
     8701 caacgccgca gtggccatcg ccgaggcgat accggccgag gcgcggttgt cggtcttgcg
     8761 caggtcgcgt tcgaagccgc ccatgcgctc gtcggtgtag gccttggacc agtccagggt
     8821 ctgcgccatg cccgacttca gctgatcgac attgactgca tcgttgcccg cggtaccggc
     8881 ggcgacgttg cggaccgtgg tcgggccgct gctggtactg ccgagggtga cgctgttgaa
     8941 gttggtggca ccgttgaccg tggtgtcgta gcggatcgtg ccctgctgcg aggcctgcag
     9001 ctggcgcacg ttgaccgcat cggtggcctg cgagccgtcg gccacgttga ccacctggcg
     9061 ctcggcaccg gcggcaccga ccgacaccgt gttggcccgg ttcgccaccg aacccgcacc
     9121 cagtgccacc gagttgtcag cctgtgcctg cgagccgttg cccagcgcgg tcgaattggc
     9181 accggcagcc gtggagcctg cgccaccggc ggccgagttg gcaccactgg cagacgggtc
     9241 ggccaggttg ttggtgttgt tggcacggaa gctgccggcc acgttggtga tgttcttgat
     9301 cttctggtcg gtgtaggact tggactggtc gatggcgtaa ttcacgccat tcttcagctg
     9361 gccgacattg gtcgcatcgt ggtcgtcgga gccgtcggca acgtgggtga tcttgcgttc
     9421 gctgccgctg ctgccgaccg acacttcacc ggccgagttg ctggcaccgg tctgcccata
     9481 ggcgccggtg tagccgctct gcgcgccgac acttgccacc gaaccggcac ccagcgccac
     9541 gctgttgccg gcgctgctgc tggcgccgtt gccgaccgcc acgctgttgg cacctgcggc
     9601 actggcctgc gggccgaccg ccaccgcttc ggcaccggcc gccgtggcag ccgccgccgt
     9661 cgagttcacc gccaggtagg cactgccacc agccccgttg gtgatgcgct ggttgaggac
     9721 cttcagcgaa ccgtccaccg cgttgaaagc cgcggtgacg ttgttgtagt cgccgctggt
     9781 gaagctgcca tcggtggcga tgctggagat gctgaacttc ggcgcggtcc acacgttggt
     9841 ggtgccgttg aaggcggtgc tgccaccgaa gtaattggcg atggtgctgt gggtgctgaa
     9901 cagctggtcg ccggtgatgg catcgctgct gccggccagg atgctgcctg cggcgacatt
     9961 ggtgaccttc accgtgccgg tgccggtgcc cttcagcgag acactgttga tcacgttgcc
    10021 actgccatcg acgtcgtact tcaccgccaa cttgtcgatc tcgccagtct ggtcggcgac
    10081 gttggccagc gagttgctga ccgcgtcgaa ggcggtgccg acgtcgttgt agctgccctt
    10141 ggtgatcgtg ccgttggcgg cgatgttgtt gatcgagtag gtcggcgcgg tcagcacacc
    10201 gctggcgttg accgccgcgc caccgcccag gtgggtggcc acggcctggt tggcggcgaa
    10261 cagctgggcg ccgttgatcg cctcgctgct ggtggcactg acctggcccg ggccaaggtt
    10321 gcgcagcgtg gtggcagtac cgccctggcc cagcgtggca ctggcgtagt tgacgctgcc
    10381 gtcgccgttg aggtcgtagc gcagcgcgcc ggccgcggct gcctgcagct ggccgacatt
    10441 caccgcatcg gtggcggcgg taccggccgc catgttggtg acctggcgct ccgcacccgc
    10501 cgcgccgatc gacacgctgt tggcgcggtc agccaggctg cccgcaccga cggcgatgct
    10561 gttggcagca gttgcacggg cgttggtacc gaccgcgatc gagtcggtgc cgctggccac
    10621 ggcttcggta ccggtggaat tgacccgcag gtacttggtg ccgccgttgc ggatatcggt
    10681 gatctgcgtg ttgaggttga ccagcgatcc atcgaccgct gcaaaggcat cggtggcgtt
    10741 ggtatagagg cccttggcga tggcacctcc ggtggagatg gtgctgatct cgaacagcgg
    10801 cgcggtgaag gcacccgtgg ccggatcgaa ggccgcacga ccaccgaaga agctggcgat
    10861 ggcagcgttg gtgcctgcca gctgtccgcc gttgaccgcc tccaggctgc cggcagtgac
    10921 cgcgccgtcg gcaaggttgc cgatggtggt ggtaccggtg cccgcgccca gcgtgacccg
    10981 gcgatagttc gggttgccgg caccgtccag atcgtaggtc accgcgacat cggcaacacc
    11041 gttgatcagg ctgatcgcgc ccttcagctg ggccacgttg accgcatcgg tgttggcgct
    11101 acccgcggcg agattggtga tctggcgctc gccaccgcct gcggtaccca ccgacacttc
    11161 accggccgag acctgcggcg cggtgaggcc ataggcgctg tagctggcct gcgcaccgcg
    11221 cagtgcggcc gagcggtagc ccagcgcgac cgagttggcc tggttcgaag tagcctccgc
    11281 gcccagcagg gtctgtccgt tggcggtgcc gacggcgctg tcaccgacga tcaccgagtg
    11341 gcccatgcgc gcggcatagt cagccgtcgg taccccggtc gggttgctcg gatcgttggt
    11401 gccggcaccg gggaaggcga cattggcatc caccttcggc agttcgtggc gggcgttggc
    11461 accgatcacc acttccttgg aaccgttggc gaaggcgccg tcacccatca gcacctggta
    11521 atcctgtgcg gcattgaccg cccagcagga gatgtcggcc agggcgatgt cgaggcactt
    11581 ggccgcccat gccggcgaat ccttcggcag cagcaggcca agcagaccgc cgggattgcc
    11641 gttgttgatg ttgtagatgt agctgtcgga ggtaacgcca ccgatcaggg tcaggtgcga
    11701 gctgccaccg gtaaccgcac cgcccaggcc attgagcgtg ctgccgaccg gcgacaggtt
    11761 gaccaccggc agccccagca cgttgaccgt cgaataggtc tgcatcacgt tggcattgct
    11821 gagcttgaga ttgccgttgc tcaggtagcc gttgccgccg aacaagctgg tggtggttgg
    11881 accgatcagc tggccaacat tgccaaccag gccgccggtg ccgatgatca ggccggcatt
    11941 ggggtcggcg gcagccggcg ccttcggact ggtcggcgga atcgcggagg gtttggtcag
    12001 gccgaggccg ccgagcgtgc caccgaccag gccacccacg gcgctgccca gattgccgag
    12061 ggtgccattg agattgccat tgagcaggtt gcccacggcg ctgccgacgt tgccaagcgt
    12121 gttgcccagc accccaccca ggccaccggt gctgccgcca gtggcgccgt tcagcacgcc
    12181 accgacggtg ctgccaacgg tgccgactgc actgcccacg gtaccgaccg tgccattgag
    12241 ggcaccgccg acggctccac cgaccgtgcc cacggtgcca ttcagtgcgc cacccacggc
    12301 tcccacggtg ttgttgagcg tgccgcccag agcgccgccc acgttgccga ctgtgccgtt
    12361 gagggcaccg ccgacggcgc cacccactgc gccgacggtg ccaaccgccc cgttcaatgc
    12421 accaccgacg gcgcccacgg tgttgttgag cgtgccgccc acggcaccac ccacgttgcc
    12481 gactgtgccg ttgagggcac caccgacggc gccgcccacc gcaccgacgg tgccgacagc
    12541 accattcact gcgccaccga ctgctcccac ggtgttgttg agcgtgccgc ccaccgcacc
    12601 gcctacgttg ccaaccgtgc cgttgagagc gccgccgacc gtaccgacag caccgttcaa
    12661 tgcgccgccc acggccccca cggtgttgtt gagcgtgcca cccaccgcac cgcctacgtt
    12721 gccaaccgtg ccgttgaggg caccaccgac ggcgccgctc accgcgccga ctgtgccgac
    12781 cgcgccgttc aatgcaccac ccacagctcc cacggtgttg ttgagcgtgc cgtccagggc
    12841 accgcccacg ctgccgactg tgccgttgag ggcaccaccg acggcgccgc tcacagcgcc
    12901 gactgtgccg accgcgccgt tcaatgcacc acccacagct cccacggtgt tgttgagcgt
    12961 gccgcccagg gcaccgccca cgctgccgac tgtgccgttg agggcaccac cgacggcgcc
    13021 gcccaccgcg ccgactgtgc cgaccgcgcc gttcactgcg ccaccgactg ctcccacggt
    13081 gttgttgagc gtgccgctca cgctgccgac cgtgccgttg agcgcaccac cgactgcgct
    13141 gccgaccata ccgaccgtgc cattcaatgc gccgcccacg gcctccacgg cgttgttgag
    13201 cgtgccgccc accgcaccgc ctacgttgcc aaccgtgccg ttgagagcgc tgccgaccgt
    13261 accgacagca ccgttcaacg cgccacccac ggcacccacg gtgttgttga gcgtgccgcc
    13321 cacggcgccg cccacgctgc ctaccgtgcc gttgagcgca ccaccgactg cgctgccgac
    13381 cgtaccgaca gtgccgttca atgcgccacc gacggcgccc acagtgttgt tgagcgtgcc
    13441 acccagggcc ccgcccacgc tgccgaccgt gccgttgagg gcgccaccga cagcattccc
    13501 agcggcgccc accataccgc caacgaggcc acccacaccc agcgcgctgt tctgcgccgc
    13561 aacggtcgcc tggcccgcca gcttgagatt gcgatccgcc accacttcct gcccatccgg
    13621 cgcctgcacg cgcaccttac cggctacgcc ggtgtcgaaa gccgcggtga tcgcgcggtc
    13681 atgggtttct cccggcacct cttccttggc aggcagcgtg accgctgccg tcgccctggc
    13741 ctggccttga gcgtcgatct ggtggcccgc caccttcagc ttcgactcca gcgcaccatc
    13801 agccgctgcc ttcaggcctg gcaggcctcc cgccgacgca gcactgacgc cggccgcagc
    13861 cttggcactg ctgtcgatcg acgccacctg cgcgcccgca acaccgacct tggccttggc
    13921 gcgtgcgtct gcggcaatgc ccagcggcgc ctgcgccgcc ggcgcaacct gtgcagccag
    13981 cgatgcatcc acctgcgcgc cccgtaccgc agcattgccc aggcctacgc tggcgcgcac
    14041 atccgccgca agacccggta ccgcaacctg cttcggcgtg ctgccggccg ccagcttcac
    14101 ctgtacggtg gccggcagca catcacgcac caccggcagc gacgccgtgc tcagctgcag
    14161 gccaacgcgc gcatccgcgc tgatcgccgg gctgctctgc gcctgtcgcg cggcagctgc
    14221 caatgcaact tcggcatcaa ccttgaccgg catcggctgc gtgtacttgg cggcaagcgc
    14281 ctgcaggtcg cgcagcgatt gattcgattc ggatgccccc gcgtgcccgc tggccagcgc
    14341 acacagcagg gcaagggcca gggcggtcgg caccagcagg acactgcgcg gatcacgggc
    14401 agcggtgcca ccgctgtcgc ccgtggcgag ttccgaggcc acaaccagag cattgagctg
    14461 gcggttccat acacgccggt agatgcggtt catgagcatt tcccccgtag gcgaacaact
    14521 ggaatgtcag tggacttgcc gctaggcagg tgactcacat ttcagcgcgg gcggaagcca
    14581 cggcgcactt cattccggca cggcaatcgc gcattccggc aaatccacgg ccggaatcgg
    14641 cagccggtta tgcagaagcg gcaaccatat cggcaagcgg atgtgcaatt ccggcagaaa
    14701 ccacggaaaa ccccttgtgc cgcttgattc aggccggctg gccaatctgc gccggggcgc
    14761 gcatcagggt atcgcggggc agttcgccga ataccttgcg gtagttgtcg gcgaagcggg
    14821 agaggtccca gagcccgcaa ctgagcgcga tcgctttcac cgagcgccgg ctggaatccg
    14881 ccatcgacag gctgcggcag gccgcgcaca gccgcagcat cgacagatag cggttgggcg
    14941 atgtaccgaa caggtcttcg aaggcgtagc gcaggccacg ctcgctgacc ccggccgcat
    15001 cgcatatctc attcatgtag atattgcggc gcaggttgag ccgcatgaag ttttccgcgc
    15061 gctgcgcaat cagataatgc gttcgccgcg cgcggctgca gccgggccgg tcggaagcgc
    15121 cggccccgag cagcgcctgt acatgctcgt gcaacaggcg ctctgcttct tctggttcca
    15181 ggttgccgcc ctgccccagc tggacatgca actgctgata atgacgcgca agcggcgccg
    15241 attcgctcga caggttgaaa agcgacagtg cctgtccggc cggcggcgtg ctgcgcaggc
    15301 tcagctcggt cagcttgcgc tgtacacgcg caaccggcac cagcatcagg gtcaggtgcg
    15361 tacctgggct cagcgtgaac tcgctgatgc cctccggcat caccgtcaac gccattccgg
    15421 gcgtcagcgg tatgccgtgg caccagctca gtgtctcgtc ggtcgcgtgc aggtatccca
    15481 gcatcgccca gtccggtggc agcatgaaac ggccgcggca atggaatccg cagctgatgc
    15541 tgcagaacag cgcttcctcg tgcacacgcg aagcgaatgc cgctcgcggc ccattgccat
    15601 cgagcaacaa cagttcgaca tcgcacactc gaagtacgcc gctcagcgtt gccagatcga
    15661 tcgatcgcag gccgctgtcg tcgctgtctc ctaccccacc atcgaccatg acagtgtcat
    15721 cccccattga tccgtcacac gctgcggccc ccactgcctg acagggccac acctttccac
    15781 gaacatccgt cgttgccggg acggacgcag ccaatgccat gcaaactgcc cgggaattgc
    15841 cacaagctga agtcgagtat gcccgataat ccacccgggt aaacccgcag cctgcattga
    15901 agaaaataga tacacaggtg aagaaaatgt ggccgccact ggcacggttt tcgcatgtga
    15961 tcgaaagggc atcacattat ctgcacgtcg gtgaatcgtt ttgccggcga acggatttgc
    16021 gtcacagaaa cagcctgaaa gtttaagcat tgacgggttt ctgccgaatt tgcatatagg
    16081 ttccagttgc agccaaccgc cattcaggca aagtcgataa cacggtgatc cggccacttc
    16141 aacgcggccg caccctgggg gagcacatga ccatggccgt attgcacgac attccgacca
    16201 gcggcgcagc gtcgcgcggt ggacggcgcg cggccggcat tttcccctgg gctgatcacc
    16261 ctgcttgagc acggcgggca caccccgtcg tgcctccccc gccaggacgc gcgggggtcc
    16321 acggacgatc ccggcggagc cgggccaccg cccaacaggt gtcctgcagc agacaggtag
    16381 agggagaaaa tcaccatgaa cgcatcgatc cgcacgttcc tgaaggaaga agacggcgtt
    16441 accgcgcttg aatatggatt gctggcagcg gtcattgccg gtgtcctgat cgcggtcggc
    16501 cgcacccaga tcacctcgtt tttcacaacg ctgttcacgc acctgacgga tatcgccaag
    16561 gacgccacca cggcggcgaa gtaaacgcgg cggatatgga ccgatccaaa ctccggtaat
    16621 agtgaaacta ctggaagcaa ggtcggggag tttccaggga cagcccggta tcgggcgacg
    16681 gagtgtgcga tgacactgct gggattgttg gccatcggcg tgtgcctgcg gatcgcgatc
    16741 agcgatctgt atgcccgccg ggtgcccaac gcctggctgc ttgccgcgtg cgcgctggct
    16801 gtaccgctgt tgatcgctgg ccagttcagt acgccgcgcc tgccgtgggg atcccacgtt
    16861 gccggcgcgg cgctggggct ggtcgcattg cttccgttct acgccgtgcg ctggatgggc
    16921 gcgggcgacg tgaagttctt tgcggtgctg ggcctgttgc tgggattgga agcgctgctg
    16981 ccgatctggg tggtcgccag cctcgccgcc gggcttcatg cgctggtggt gctggcctcg
    17041 cgccgcctcg gccccatgct gccggccggc ctgcagctgc agatgacccg ggccagctcg
    17101 cagtggcaga cacatcctgc gctgcgcgaa ctgcagagcg cacggcaggg acgccacggt
    17161 attccctacg cggcctatct ggcgctgtcg gccatcggct ggatcatcat ccaggtctac
    17221 ggaggtgttt catgaacact cgcagccctc gccggcaacg cggcgtggcc agcatcgagt
    17281 tcgcactgat gctgatgctc ggcttgctgc cgctgctgct gttcactttc accggggtga
    17341 tgatcatggc cgcgcagcag acgctggcga ccgcatccgc agagggagca cgcgcctccc
    17401 tgcgctacgg caccaacgcc cagcgccgca ccgcggcctg tgtcgcagca cgcaactcaa
    17461 tgcagtggct gctgcagttc tccaagcagg acgtggactg cagcgcaggc ggcagcaatg
    17521 ccatcgtggt cgccgcgccc gcgccctgtg cagggctgcc cgccgcgcag tgcatcaccg
    17581 tcacggtcag ctacgactat gccggccacc ccttcctgcc cggcaccgcc accctctacg
    17641 ggtgggtgat gcaggctccc atccgcagcg tcgcggtcgc ccagctcgac ctcggcagcg
    17701 gcacctgacg attggtacag gagacggttc catgctcaag ttgacccgca tcgccgccgt
    17761 cgccctgatc ggcctggccg tgctgctggc cgtgattgca ctgatgatcg gccgcaagcc
    17821 cgacgcgccg gtacatgtgg cgccggtcac cagcgcggac ccgcaggcca tcaccgtggt
    17881 cgaagccgtc gcccggctgc ccgccggcga gccgatcact gccaatggcc tgcggctggc
    17941 ccagcgcacc acgccggtcg ccggcgccgc gaccagcatt tccaccgtgg tcggcaaggt
    18001 tccggtccag gacattgctg aaggcagcgc gatcagcacc tcggccctcg cgcagggctt
    18061 ctcgctgcag ctgcggcccg gtgagcgcgc actggcggta ccggtcgatg aactggtcgg
    18121 cgcgggcaat cgcatcctcc ccggcgattt cgtcgatgtg ttcctcaacc tgcgcaccgc
    18181 ccagcccagc gcagggggcc cgggtgaggc cgcgcaggcg cgcctgctgc tgtcgcgcct
    18241 gcgcgtgctg agctatggcc agcaggatat cgcgccgaac ccgggcgata ccgccgccag
    18301 caccgatggc agcgatcgca acgatgcacg cgccgcggac atcaccggca gcagccatgg
    18361 cgccagcgac gagtcccgcc agccggcgcg cagcgcagta ctggcggtac cggtggcgga
    18421 cgccaaccgg ctgctgctgg gcgcccagca gggcaagctg ttcctggcgc tgcgcaatcc
    18481 ggccgatacc ggcctgcccg accttgccct gttcccgcag gcgcgggggg tgatcgatcc
    18541 gttgcgcgga ctggacgcag agcagcaggt ggccctgcag cgacccgaga accatgcctt
    18601 cgcaggcatc gatggcgatg cgctggccgg gcgtggcgcc gccccgaccc gcgtcaaccc
    18661 gcaggcggcg ccgcgcgcac cggccgtccg ccacggtgca ccccgcgcct ccggcattga
    18721 aatcatccgg ggtgacagct ccgctccccg tggttccctc tgacctgccc cgagtgcatc
    18781 catgacccaa cgccgactgt ctccacgccc ctcccctcgc cagcgctggc tggccctgat
    18841 gctggtgctg ctggcaccgg caacaagcgt ggccgccgac gatctggtgc tgcaggcccg
    18901 tgagcagcgc ccatggagcc tgcccgccga cctcgagcgc gtggccatcg ccgaccctgg
    18961 tgtcgccgac atcgtgatgc tgcgcggcca gcgccaggcg ctgctggtgg gcaaggcgcc
    19021 cggcaccacc acactgctgc tgtggcaccg caagcaggcc gagccacagc gcgtgcaggt
    19081 gcgcgtgcag agtgccgtgc agggcgcggc gagcaccggc acgagcggcc tgctgttcac
    19141 ccagcaggac caccagggcc tgctgcaggg aagcaccgac agcgtgcttg cgcacatgca
    19201 ggaacagcag actgcggcga tggcactggg caaggagggc cagctcgccg acgcatcgac
    19261 ggtcagcagc ggtggcgtgg tacaggtcga ggtcaaggtg gtggagttca acaagaccgc
    19321 cctgaagcag atcggcatca gcttccagaa ccgcaacggc agcttcgcct acggcatcgc
    19381 ccgtcccggc ggccagttgc ccggcaacac cggcatcctg cccggcatga aggaaggcga
    19441 atcgggcaac gagtcgacat caccgatttc ctcggcgttc cgcctggtgt tcggttccac
    19501 caagggcctg tggaatgccg atgtcgacct gctgcagagc aacggcatgg cccgcgtgct
    19561 ggccgagccc accctggtcg ccttgtccgg acagagcgcc agcttcctgg ccggtggcga
    19621 actgccgatc ctggaaccgc agggcctggg caccaccacc atcacctaca agccgtttgg
    19681 catcgggctg actgtgaccc cgaccgtgct ggcaccgaac cgcatcgcac tgaaggtcgc
    19741 gccggaagcc agcgacctgg actacagcaa ttcgattgcc ctcaatggtg tgcagatccc
    19801 ttcgatcacc acccgccggg ccgacaccac ggttgaactg ggtgacggcg agagcttcgt
    19861 catcggcggc ctggtcagct ccaacgtggt gtccagcgtc aacaagattc cgctgctcgg
    19921 tgacctgccg atcatcggct cgttcttccg caatttcgac tacaagcgtc aggacaagga
    19981 actggtgatc atcgtcacgc cgcggctggt gcagccgctt gcgcgcaaca ccgaactacc
    20041 gctgcccggc gcacgcgaag ccaagccgaa cctgcccgaa tggggctcgt ggctgctcgg
    20101 cccgatcagc caggacccgg tgcccggctt ctcacgctga ttccatgatg cctgcgatac
    20161 cacgaccatg ccctacgcca ccgcccagcc cctgcatcca caaggaccac cgatgaacct
    20221 ggtcctgtac ggaatggatc gcgaactgct gccccggctg gctgccaagt tgccaccgac
    20281 cacgaccctg cactggcagg acagcaacgc gccgacctcc gcacaggacc ttcaacgcgg
    20341 gggccagagc ctggtgctgc tcgatttccg ccccgaacac gcggccgcct ccagcgcact
    20401 ggcccagcag ctgcagcaga cacagccgga cctggtgctg gtcgcggtcg gcgctaccag
    20461 tgccggccag gtcgaaggcg tggtgatcgc gctgcgcgcc ggcctgcgcg acgtgctgga
    20521 cctggacagc gacaatgccg gcatcgaagc cgcgttgcgc cgtgcgctgt cgccaagacc
    20581 ggcggcctcg ccacaactgg cgcacaaggc ccgcctgatc gtgctgctgg gcgtgcgtgc
    20641 cggagtcggc accagcaccc tggccgcgca cctgtcagtg ctcgcgcagc agacccgcac
    20701 tctcgcccag ggcgaagcgt tgcagcagga tggtctgctg atggagctgg cacagccgtc
    20761 cggcgatctc gcgctgtacc tcaacctcga cagccgcttc cactacgaag acgcgttgcg
    20821 caacgccagc cgcatcgacg ccaccctcgc ccgcaccgcc atggcccgcc atgattctgg
    20881 actggtgctg ctggatcggg ccggtggcag tgacgcggtg ccgccctccg atccgggtgc
    20941 actgctgcag cgcctgcgcg cggtcttcgc cagcgtgctg tgcgatgccg gcggctgccc
    21001 cctgcggcag ttgccgccgc tgctgctgga tcaggccgac gaaatctggc tggtcaccga
    21061 cgcctcgatc gctaccctgg tgtcgctcga ccaggcgctg aagcatctgg cgggtcagcg
    21121 cgaacgcgag aagcggctgc agctggtgat caatcgccac gacgacagca gcggcatgag
    21181 ccccgaacag atcgcgcgcc gcttcgaggt gccgctgctg gccaccttgc ccgaacgtcc
    21241 acgcgtgcgc cttgctgcca gccagggcca cctgctgctg caggacgcac cgcgcgaccc
    21301 ctacctgcgt gccctcgccc cgctcgtttc gcgcctggac ccggctgcat gcccggtgca
    21361 ggcacaggga ctgcgggaaa gactctccct tgccctgggt ggatcgcaat ggaagacaag
    21421 gtaaccccgt tcccgcatgc cgccacccgc ccggtgctgc ccgacacccc gccgggccac
    21481 ctgccgttcg cgcagaccga gcagtaccag aaggtgctgt cggccgcgca tgagcacctg
    21541 ctcaacagca tcgaggacga gcgcatcgac atcgattcct gggcgccgga taccatcgca
    21601 cgctgggtgc aggtgcagac ggtgggcttc atccaggaat ggcgcatccc gatcaatgaa
    21661 gaagaaatgc aggtggtcgc agaagggctg gtcaaggagc tgaccggctt cggcccgctc
    21721 gacgacctgc tgcatgatcc gtcgatcgaa gacatcctga tcaacggctt caaggacgtg
    21781 cacgtctcgc agggtggcca gctcaagcgc gccacgcagc gcttcaccga cgatacccac
    21841 ctgttgcgga tcctgcggcg catcctcgca ccattggggc gccgcctgga tgactccaac
    21901 ccgatggtcg atgcgcgcct gcccaatggc gggcgcctga acgcgatcat ctcgccgctg
    21961 gcggtggatg gaccgatggt ctccatccgc aagttccgca aggacccgtt cacgcctgac
    22021 gagctgctgg ccaaaggcac cttcgacgcg ccgatgcagg cgctgctgaa agcgatggtg
    22081 ctggggcgct gcaacatcct ggtgtcgggc ggaaccagct ccggcaagac ttcgctgctg
    22141 aacgcactgg ccagctacgt gccgcccaat gagcgcgtga tcaccgtcga ggacactgcc
    22201 gaactgtcgc tcaaccaccc gcacgtggtg cgtctggaaa gccgtatcgg cggcgccgaa
    22261 ggccatggcg cagtgagcat ccgcgaccta gtgcgcaaca gcctgcgcat gcggccggac
    22321 cgcatcgtgg tcggcgaagt ccgtggcgcc gaggtgctgg aaatgctgca ggcgatgaac
    22381 accggccacg acggctcgat ggcgaccatc catgccaatt caccgcgtga ttgcctgtac
    22441 cgcatcgaga tgctggcagg tttcgccggc ttccagggca gcgaagacag ccttcgccgg
    22501 cagattgcca gtgcgatcga cttcatcgtg cagatctcgc gactcggcag cggccgccgc
    22561 gtgctggtct cgatcacgga aatcaccggc gtcagcgaca acctgatcac gacccaggag
    22621 atgttccggc acgaactgca gatcgacgca aacggccggg agatcgaccg ctggatcgga
    22681 ctgggcttcc agccccactc gcacaagctg gaaccgttcc gccagctgct gcgcgaatcg
    22741 ctgtacggag actattgagc atgggcaccg gtctgctgct gggcgtgctg agcatcatct
    22801 ccgtgctgct ggcgctggcg gcatggctgt ggggcacggc cagcacccgc gagcagcgcc
    22861 aggcttcgct gcagcatgcc gagcagcagc tggcgcgtgg caatacagcc acttcgccat
    22921 cggccggcat cgccagtgcc gccgccaacg agcccgcgcg gcctgccagc agcgggcgca
    22981 ggccgctgcc ctggaatgga ctgctgcaac gtgcaggcct gcaagcgggt tggaaacttc
    23041 cggtgatgct gctggtgccg gggctggtgc tgtcactgac ggccatgctg cggctgggca
    23101 ctgcgtggat gttcccgctg accctgcttc tgtacgcgct cggttgctgg ctgtggatca
    23161 tgcgccggac cacccggctg cgcgcgcagc tgctgcacca gctgcccgat ttcctcgaca
    23221 acctggtgcg cctgaccgcc ctgggcaaca gcctgcaggc ggccttccag gtcgcgtcga
    23281 tgcagaccag cgcgccgctg cgtggcctgc tcgacaccac ggtgcgctat gcccgcagcg
    23341 gcatggatct ggatcgtgcg ttgtcactcg ccgcacagcc ctatcgcatg gatgtactga
    23401 aggtgctgtc ggtggtgatc ggcgtcagcg tgcgcatcgg cggccgctcc gaccagatcc
    23461 tgcagcgcat gggcgacttc atgcgcgacc tggaacaggc gcagcaggag ctggcggcga
    23521 ccacctcgga aacgcggatg tcggcctggg tgctgggcct gctgccgccg gccagcgccg
    23581 tgctgatggc catcgccagc cccgacttct tccagccggt gctgcacgag ccgctcggcc
    23641 acaaggtcct gctgatcgcg ttgggcctgg agctggtggg cgctttcctg ctgtatcgac
    23701 tggccaaatc gctatgagcc atcgcagccc ccctggagaa gcccgatgag tgcaagtacc
    23761 tggtttgcgc tttcactgct ggtgctggcc gcgggcgtgg ccctgctcgg gtttgccggt
    23821 tgggtccgca gccatcgtga acagcgcacg tcggccacgc tcaagaccgc cctgcagccg
    23881 cgtgacgaag cgcgcgaagt ggaagccacg ggccgcgact cgctgggctg gctggagcgc
    23941 ttcggccgcg cgctcagtgg tggccgcctg gaagccgcgc tgctggccaa cgaggatcgc
    24001 ctgctgctgg atctggccgg ctggaacacg cgccgcggca ccgccatcta tctcggcgtc
    24061 cgcctgctgc tggcgctgct ggtactggcc cttgcgctgg ccttcagcga agcgaccggg
    24121 ctggcgaaga tcatggtggt gatcggtgca ctggccgcgg gcctgctgct gcccaagttc
    24181 gccctgtctg cctgggtcaa gcgtcgccgc cgtgcagtcg agaacgagct gccgttgctg
    24241 atcgacctgc tgcgcctgct gcagggggtg ggattcagca tggaccagag cctgcagacg
    24301 ctgggcgaca agctgcgtga tgcgctgccg atcctcggcg gtgaactgca ggaagccaac
    24361 gtggcctaca cccacgggcg cacccgcgcg caatcgctgc gccgcctgag tgacgtctac
    24421 ggtgacgacg acctgagcag cctggtgcaa ctgatcctgc aggtgcatgc acacggtggc
    24481 gcggtgcagg agccactgcg ccagttcagc atccgcctgc gcgagcagcg ccgcaactcg
    24541 ctgaaggaaa aggtcggcaa gctctcggtg aagatgacgg tagtgatgat gctgaccctg
    24601 ctgccagcgc tgatgctggt tcttgccggc ccggcgctgg ttgcgctggc cgccaccatg
    24661 tcctcgatgg gaacgacctg atgcccgccc ttcgcaccgc ctgcctgctg ttcgcccttg
    24721 ccgccgtcgc cagtggttgc gcgtcgacca cgccgaagta cctgcgcgcg cccagcctgg
    24781 ccgcgccaga accggcacca caggacagcc gcaacgccta cctggaactg atcgcgcgca
    24841 tgcagcagca gggcgcctgg tatgcctcgc tggcccacgt cgatgcattc cgccagcgct
    24901 acggtgatcg cccggcgctg cggctgctgc aggccgacgc cctgcgcgaa accgggcaga
    24961 ccgacgctgc catcgcgctc taccgcgaac tgtccacggg gccgcaggcg gccgccgccg
    25021 cacatgggct gggcctgatc gccgcgcatc gcgatgacga tgacggcagc gagcaggcac
    25081 tggcccgggc cacccagctg gagccgctga acaccgacta cctcggcgat ctgggctacg
    25141 cgcggctgcg tgcaggacag ttcgaccagg cccgtgagcc gctggcaaag gcgctcgagc
    25201 tgtcacccgg caatgccaag gcgacggcca accttgcact gtgggcggtg ctgcgtgggg
    25261 acaccgccac ggccgagcgc ctggcccagc aggccaacct caacgaagac agccgccgcg
    25321 gcatccagca gcaggccgag cagatccgcg cacgcctgca gcagcgccag gcggcagcag
    25381 cggcacgcga ggtggcagcc ccccgcgcgg ttgccggccc gccggcccgc ccgcaggccg
    25441 cagcccggct ggccgccgaa gcgcgacgcg acgctcgcga tgagcggaat ccgcagcgcc
    25501 tgccaccttc gatgctcgaa cgcttcagcc ccccagacca gcccaccggg aacacgccat
    25561 gatcaagcca cacctgaccc gtcgcctgtt gcccgcgctg agcggcctgc tgctggcgac
    25621 agctgcccag gcacagcaac agccgctgac cgggcagatg ctcggcggcg cccgtcccgc
    25681 ggcaaccgca gcgcaaccgc tgcagtccga aacgctggca acagtcgacg tgtccgtgcc
    25741 cgaggcacgt gtacccgtac cggcacccgc ccctccccct gcctaccacg tcgccagcac
    25801 agcggccgca cctgcgccag cagtacgccg cagcgagatc ggcgacgcca cgcgcagcct
    25861 gttccagctg caggcctcgg gacagcaggc cggcccgcgc ctgccgatcc tcggcgacca
    25921 ggccaccctg agctacgcac gctacctgaa gagcttccag cacgagattc ccgatttctt
    25981 tgaaaccgat gtcggcaagt ccaagggaac atcctcatcc ggacgttgag gtaggccatg
    26041 aaacgcccac gccagttcag cttcaaccgc ccccgcggcg gcatgtcggt caccatgatg
    26101 ctggtcatgc tggtgctgct ggccatgctc gggctggtcg agatcggcta cctgttctgg
    26161 gccaagcgcg atgcgcagaa ggtcgccgac ctggcggcac tggccggcgc ccagcgcctg
    26221 gaactgtgca cgtcggacaa cagcgacaac agtgcggcgc ggcagagcgc gctgacccag
    26281 aaccggtttg ccggcagcct gcagatcagg tgcgggaact ggagcgcgac acgcggcacg
    26341 accaatcgtt tccaggggac tgtggatgcc gccaatccac gcaatgccgt gcaggtcatc
    26401 gcgcagcgca gcgtgctgcc cttcttcggg cagaacacca gcttgccgac cgtcagcgtg
    26461 caggcggtgg cgcgccgctc cgagcccact gcggtgttcg ccgtcggctc gcagctgctg
    26521 cggacccgcg gcgattcgct gctgatgtcg accctgcgcc tgatcggcct ggatgtcacc
    26581 aacgccaccg tgctttccta tgacggcctg gcgcaggcca acgtcacacc ctccggcctg
    26641 ctgaaggcgc tcaacattcc agtcagcgcc aacctcagcg tggccgactt caaccgcctg
    26701 ctggcagtca acaagatctc gctggcgcag ctggtcgacg ccaccgccac ggtggtcggc
    26761 cgcgatacca ccgtcggcgt gcagctgcgt gccctgtcgg acctggtcgc cacccggctg
    26821 gacatcacca agctcaacat cgcgctgggc agcgaatccg gcggcggtgg cctgttcgcc
    26881 gaagtcattt ctccggacgg taccgccggc agcgcgctgg aatcgaagat cagcgtcctc
    26941 aacctgatca gcaccgccat ttccatcgcc aatgagggca atggcatcgc gatcggcggt
    27001 ctgaacctgc tcggcatcaa cgtgcaggcc ggggtggtcg aaccgccgtc gatcgccatc
    27061 ggtggcgtgg gctcacgcgc ctacaacgcg caggtccggc tgatggccga tgtcgacagc
    27121 aacaacctgt ttgcgcttgg cccactgctg cagctgctgg gtacgcgcct gcatctgccc
    27181 gtacacgtcg atgtcgccaa cgcaatgggc acgctgaccg gcatccaatg cggtggcacc
    27241 tcgccacagg ccaccatcca ggtcgattcc tctgtgctgc gcgcctgcgt cggcaacgtt
    27301 gatcccgcac agcggttctc caagaacaat gtctgtgaca acaccctgca gaaggaacag
    27361 ctgctgacac tgctgggcca gcccttgatc aacgacaaga tcaccctgcc cgcgttgacc
    27421 agttcgcaga acctgaccct ggctgccggc gagagcggct ccacccagat caatccgctg
    27481 gcactgggca atgccgtttc cgatctggtc aacgagttgc tgcgggtcct gtccggcatg
    27541 ctcagctcac ccaagcaggg catgagcgcg aacgacaccg ccaaggcgct cgccgaccgc
    27601 tacctgcagg cgacgttccc gcccaacacg cgctatgacg tcaacaagct gattccgctg
    27661 ctgcgcgatg gcgaccccag ccggcagctg gcgccgctga acagctggaa tgtgcccggc
    27721 ggcctgccct acgcctgcgg cctgctgaac ctggtcacct gccacaagga cgggccggtc
    27781 tgggatgcgt tcaaggtcac cgtcaccggc cagggcctgg gcgtgctcga cgggctgctc
    27841 ggctcactgg tcggcggcct gctgatcaac cgctgcgaca gcctgctcgg caacctgatc
    27901 gactacaacg gctgcgtgcg caacaacctc gcctcgtaca tccagaccgc gccggccggc
    27961 ttcctcgatg gttccggtgg aaacggcgtc agcaaccccg atggcagcgt cagctgcagc
    28021 ggactgctat gcacgctgct gaagccgatc ctggccgcgc tgcgcccggt cctcaacagc
    28081 gtcggcaccc tgctgaccaa cctgctggcc agcgtgctgg ggctggaact ggggcggacc
    28141 gatgtcaacg tgcaatcgat ccagtgcagc gccgcgcagc tggtctattg acccgtgacg
    28201 ggcgcccttg gcggcgcccg cgcccatgct agactcccgg cggggaacca ccttcatctc
    28261 aacccacact catccgtgga tggtctagac atgcgagaaa cttcaggggg cgcggtcttc
    28321 gcccgtcagg cgcgcggcgc ggcaatgctg gccgtggcca tgatgctggt ggcaccggcg
    28381 gcgatggccg cccgtggcga ccgcgaagcc gccgcagagc cggccgcgcg caccgcaccg
    28441 gtagtgcgca acaccgtgga cgaactcaag cagctgatgg attcgcgcca gctgaccgag
    28501 ctgcgcacca cctacaacgg caactacggt gccagcctgc tgttcaacgc caacaccctg
    28561 acgtattacg tcgccctgtt ccaggaaaag aacttctggc gggtgatcaa gaccgatgcc
    28621 gtggacaacg ccgagcgcgt ctaccgcacg tttgcccagc agtccgaaca gctggcgcag
    28681 gtctatatcg acaccacccg gctggaagcc ggcaagcgct acaccgagcg cctggtggcc
    28741 tataacgagg agcgcctgcg cacgctgcag caggaaatgg aacagcagca ggcgcagtcg
    28801 gcccaggtca gcgcggccct gcagcaggcc cagcagcagg ccgtcagcct gagtaccgac
    28861 gtgcagagca ccaacagcca actggacgcg ctgcagcgcc gtatccagat cctgcaggcc
    28921 gaacagggca acccggagct gagcctgccc aagccggaca gcgtgccctc gccggcaccg
    28981 gcggcggcca gcgacggtcg ctgagcccgc gcttccagcg tctccgcaca acggcgccct
    29041 tgggcgccgt tgtcgtttcc agcactgaaa tcagcgacac gcgtcgtgca ccgcgtcatc
    29101 cagctgtcgg cgctgtacga agtccaggcg cctggccctg gccagcgcct tcccgcgttg
    29161 ctgccgtgca cgctcacagg cggcgggatc ggcgctgatc gggatcagcg cagcccgcgc
    29221 gcgcccgggg cgtgacgccc gccgccgggc cggcgctgca gtggacgtgg caggcaccgg
    29281 gccacgcgac aaggactgtt ccgccggaac gtcccagcgc cattccgcgc gcccttggca
    29341 cggcgtctgc tggtagaccg ggtaagcgcc gtccacgcac ttgtagacgt gggtctgcgc
    29401 gcctactgcg gccgacagca gcaggcacac caacaggcag catggaagtc tgggcattgc
    29461 gggctccgcg acaggtccgc tgccatcgtc agccgacccc cggtccgccg ccagagcgat
    29521 acacgtcaca gccccggcaa tccagcacag gcgtgcaagg catccgatag ccattgcgct
    29581 gtactgccgg aggcaccggc aggcctgccg gtgccttccc tcccttccgc caaggaacct
    29641 gcaatgagca actacgtcac cgtcgccgat ggcgcccgca tcttctacaa ggactggggc
    29701 agcggacagc cgatcgtgtt cgcccacggc tggccgctgt cctccgatgc ctgggacccg
    29761 cagatgctgt tcatggggca gaacggctat cgcgtgattg cgcacgaccg ccgcagccac
    29821 ggccgctcca gccagacctg ggacggcaac aacatggata cctacgccga cgacctggcc
    29881 gcggtgatcg acgcgctgga cctgaaggaa gcaatcctgg tcggccattc caccggcggc
    29941 ggcgaagtgg cccgttacat cggccgccac ggcagcaagc gcgtcgccaa ggtggtgctg
    30001 gtcggcgccg tgccgccgtt gatgctgaag accgccggca acccggccgg cactccgctt
    30061 gaggtgttcg acggcatccg caagggcacc ggcggcgacc gttcgcagtt cttcaaggac
    30121 ctggccacgc cgttcttcgg cgccaaccgc gatggcaaca gcgtcaccca gggcatgcgt
    30181 gattcgttct ggctgcaggg catgctcggc ggcgtcaagg gccagtacga ctgcatccac
    30241 gaattctcgg aagtggacta caccggtgac ctgaagaaga tcgacgtgcc tgcgctggtc
    30301 gtgcatggcg atgatgacca gatcgtaccg ttcgatgctt cggccaagct gtcctcgcag
    30361 atcatcagcg acgccgaact gaaggtgtat gccggggccc cgcacggcct gacggtcacc
    30421 cacgccgacg cgttcaacgc cgacctgttg gcgttcgcac gcaagtg
//
LOCUS       DAOKIP010000029        30414 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.029,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000029 DAOKIP010000000
VERSION     DAOKIP010000029.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 30414)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 30414)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..30414
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.029"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..494)
                     /locus_tag="QEL58_001147"
     CDS             complement(<1..494)
                     /locus_tag="QEL58_001147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012480627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HDS1675645.1"
                     /translation="MNYTLRNEAAADIAAIHALTAAAFATAEHSSHTEHFIVDALRAR
                     GELAVSLVAEADGERVGHVAISPVAVSDGSSGWFGLGPISVLPGWQGQGIGAALMRAA
                     LEALRQQGARGCVLLGEPGYYGRFGFRADPGLILPGVPAEYFQALCLRPPMAQGEVQY
                     SPAF"
     gene            complement(568..825)
                     /locus_tag="QEL58_001148"
     CDS             complement(568..825)
                     /locus_tag="QEL58_001148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019454443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjhX family toxin"
                     /protein_id="HDS1675646.1"
                     /translation="MNISRAEQRTLHVLAQGGCIAFSRDGSGRVRSVECFNREGLLLS
                     DCTLAVFKKLKNKRLISSHDGRPYRINRAGLVAVRPQLDNR"
     gene            1106..1765
                     /locus_tag="QEL58_001149"
     CDS             1106..1765
                     /locus_tag="QEL58_001149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional (p)ppGpp
                     synthetase/guanosine-3',5'-bis(diphosphate)
                     3'-pyrophosphohydrolase"
                     /protein_id="HDS1675647.1"
                     /translation="MDWVAQARALATQAHAGQQDKAGQPYIEHVARVAAAIHDDDMAK
                     AAAWLHDVVEDCPQYAAQVQAFPAPIRDTVSLLSRHTAADADQYYARIRQHPLALKVK
                     LADIADNAHPRRLLQLAPALADRLRSKYAAALVALGGQRAATATPATATTRLLQLMDA
                     AHTLAALASEPEVTAGGGQDAPYPRQAALLTVCEVVRAEVEAQMTPETFVIWSDMYVQ
                     P"
     gene            1885..3096
                     /locus_tag="QEL58_001150"
     CDS             1885..3096
                     /locus_tag="QEL58_001150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDS1675648.1"
                     /translation="MSPNSSLAARLTPRQRTLIILALSLGGFAIGTSEFASMGLMLEI
                     SRGLSISETQVGHLISAYAIGVVVGAPILAFVGASFPRRKLLLALMGFYAVGNLASAL
                     APNYATMLLARFVAGLPHGAYFGVAMLVAAAISPAGQRGQAMSRVLLGLSIAILVGNP
                     LTTWLGQQLSWRTAFALVSLLAIATVVMIARFLLPDPDEVRTSPMRELRAFNTTQVWL
                     ALAIGAVGFAGMFCVFTYLAPTLVQVTGVAESWMPLAVGVFGIGAIIGNIAGGWLVDK
                     FHFKAAAVVLLWSIVMLLLYPLAAQSVWTIGPMIITVGTMGALAAVLQTRLMDVAGEA
                     QTLAAASNHAAFNTANALGPWLGGMAISAGFSPASTGYVGAATALGGLLLWGVAVMLD
                     RKRKHAVAGSH"
     gene            complement(3113..3592)
                     /locus_tag="QEL58_001151"
     CDS             complement(3113..3592)
                     /locus_tag="QEL58_001151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008264635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HDS1675649.1"
                     /translation="MKIGELARRTGLAASRIRFYEDAGLLVVQRQANGYRDYPEQAVL
                     LLELIIGAQRAGFSLEEIRALLPPDMGQWQHDALITMLRRKVADIEALQLRLAQSRAH
                     LLALIEDIQARPDGIDCAANSRRVLDRVQRGELARPTLAAGDGALLRPGRRRRTGSD"
     gene            3682..4920
                     /locus_tag="QEL58_001152"
     CDS             3682..4920
                     /locus_tag="QEL58_001152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008267256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:flavin oxidoreductase/NADH oxidase family
                     protein"
                     /protein_id="HDS1675650.1"
                     /translation="MSLFSPLALPSGAVIHNRIAKAAMEENMADADHAPSPALLELYQ
                     RWADGGAGLIITGNVMVDGRAMTGPGGVVLEDDHHLDRFIAWADTARARGVQMWMQIN
                     HPGRQMPAALGQPALAPSVVPLQMGALSSQFAPPRAMTEADIEEVIARFIRSAELAER
                     AGFSGVEIHAAHGYLLSQFLSPLSNHRDDRWGGSLQNRARLLLEIVQGVRTAVSPTFA
                     VAVKLNSADFQRGGFSPEDARAVVEMLAPLGVDLVELSGGSYEAPAMTGAARDERSLA
                     REAYFLEFAREIATVATMPLMVTGGIRRHAVAEQVLESGVAMVGIATALAIEPDLPKH
                     WQQGHDAVPMLRIIDWRSKPLAASAHMAAVKYQLGRLSRCRPTAPGVSPLWALLLAQA
                     AGRCRTRRYRRWIAARAGSR"
     gene            5013..5489
                     /locus_tag="QEL58_001153"
     CDS             5013..5489
                     /locus_tag="QEL58_001153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019338173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675651.1"
                     /translation="MAAAPTRNREKLLDDLLSLGRNWALAIAIAGAGAAVHYSETVYE
                     AGLWRGLLPTLCFLVAIIWIVLSIIRFDLTLQQHFERKRTRWLSRLLYVVLLGTGITA
                     VFFVTELAASNHIARMCDSVANEPASRIYRSSECQRLYQHRAAYRKRLESVEGEFD"
     gene            5579..5848
                     /locus_tag="QEL58_001154"
     CDS             5579..5848
                     /locus_tag="QEL58_001154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005417254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675652.1"
                     /translation="MLHAPAPARHDAIALQAGILGSVLGVAAFKAVALSALASGSLMV
                     IGVWMLACALLGAWALAAYLACLALSRRVFVLMLALCVVLMACIA"
     gene            5975..6220
                     /locus_tag="QEL58_001155"
     CDS             5975..6220
                     /locus_tag="QEL58_001155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019338174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675653.1"
                     /translation="MNLPPLLRTSLTVLVLVPLGGCATYDDSAMHPACQESPHLKDLP
                     RDVAARESHCNKGMEVWSSERKGSDKPLDLSGKKKDL"
     gene            complement(6266..7798)
                     /locus_tag="QEL58_001156"
     CDS             complement(6266..7798)
                     /locus_tag="QEL58_001156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HDS1675654.1"
                     /translation="MLYDVVIAGAGPVGLFLSCELAQAGCSVRVLEQAESAESPLKRL
                     PLGLRGLNAPTLEALDRRGLLDAVAAAQVLKPDKGAPPPGTAHWLAQPRPLGGHFAGI
                     PFALDNVDSGRWNWRVPTPVGTQMAIELQALEAVLTERAVGLGVHIDRGCAVQAVQVE
                     EAQVAVQTTTHGTVHGRWLVGCDGARSTVRKQSGFSFEGTEPEFTGHSLLVELEDPSM
                     LTPGRQYTAHGMCNFNPPGVLALADFDGGAGHRTALDLPSAQALLRRVSGRNATITAL
                     HLATTWTDAARQASAYRNGRVLLAGDAAHMHSPLGGQGLNLGIGDAMNLGWKLAAVVR
                     GDAGEALLDSYQAERHPIGAKVLDWSRAQVALMRPGAGSRALAAVIADLADTRDGATY
                     LAERVWGVAQQLALGDGHPLVGRSVPDFVLADGRRTGELLRAGQGALLVFDVESLPCN
                     IMGDAPSHPVCMGSVPDEATGLGAVLVRPDGIVAWACGAGADPTGLAHALQRWFGTAA
                     VR"
     gene            7882..8526
                     /locus_tag="QEL58_001157"
     CDS             7882..8526
                     /locus_tag="QEL58_001157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019338177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR family transcriptional regulator"
                     /protein_id="HDS1675655.1"
                     /translation="MTPSPGRREQRKAETRQAISDVATELIIRRGFEAVSMSEIAEAA
                     GVSRKTVFNYFASKEDLVFDRDEEARALLRDGMLARNDMTPLGAFQSLVRQLLDSGHP
                     LLRINAGAAAFWATVADSPVLVAHARRLQAQLSDDLAQLMADAAGRPASDAEARLGAG
                     MLMASMVAAYEKGLASQRQGEDPREAMQQLIVRGATGVLVALAGTPYTDPALRP"
     gene            8602..10743
                     /locus_tag="QEL58_001158"
     CDS             8602..10743
                     /locus_tag="QEL58_001158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019338178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDS1675656.1"
                     /translation="MPLSAPLPRALCLALGLSLTSLALAAETPADAPRDLDKVEVRGR
                     AQTLYRATDAAVGTRTDTPLELVPQSIQVIPRELIDDQAARQVTDLYRSISGISFFSY
                     AGVTLRGFRQENVLYDGLRGDPYAGFSVPQLFNIERVEVLKGPAGALYGGGDAGGVIN
                     YVTRKPKARAERRIELQVGDKDFRAGSIEGTGPLNATGSVRYRAGLYADSEEGVRWNA
                     DSESVIGDASLAFDVGQTGELVLQFTDITQNLGGNRLRGVPVNDAGTFLTDRRWNHNE
                     ASDFLDMRAKVALVQYRFAPRDTLDVDVAARWFSNNEHQMYHEPMGLIDRDRDGVAEW
                     MTRQLRNQIRDNEAFTASANAVWRINTGRIEHKVLFGADVYQLDADFTAQTANSADLA
                     RGAGPVRGIDLFNPVYGASTWHDYNLAALPWRSTSTRSKRYGGYLQDELALGPRWHVL
                     AGLRWDGFKDEDRLGGSGVEGNDLSWRLGSTFSVCEGLNVYANVASGFVPQSAANQNP
                     AAGGPFDAERSRQWEVGLKSLLADRVTLNMAAYRIDRSNIVQATGEVIGGVNQLAALG
                     LVRSTGMELDLLADITERWVLNLTYAYNDARVKDAGPGGITNASGDRFANAPRNKVGL
                     WTRYDLPSINSAIGFGVDHVGERVSLDGQTVKAYTVFDVSWKTTWKQWQFQANVKNLF
                     DKVYAASGFIERNGHFPGEPRRVYVQAAYSF"
     gene            complement(10798..11079)
                     /locus_tag="QEL58_001159"
     CDS             complement(10798..11079)
                     /locus_tag="QEL58_001159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012511452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675657.1"
                     /translation="MKLYVPLLFVAALGGCTTARMTVTPDGRRGVSIDCSGSSSWSGC
                     YEKAGQMCPGGYVVFSKDGDEGNAIAVGNRNGFTSTQMATRSMLVSCSH"
     gene            11277..11951
                     /locus_tag="QEL58_001160"
     CDS             11277..11951
                     /locus_tag="QEL58_001160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDS1675658.1"
                     /translation="MHILLIEDEAELAATLKSALQRERYVVDLANTLALAREAALSGS
                     HDLVLLDRTLPDGDGLGLIPVLRGHNPGVPIIVLSALGQLPDRIAGLDEGADDYLAKP
                     FALEELFARIRAAGRRPGGMQVEPVSIGRLLFDPASGEATVGGQRLELPRREIRVLAA
                     LARRLGRTVLRESIEMAVYGFDDGIHSNTLDSHVSRLRRKLADADAGVEIHAIRGVGY
                     LMRETK"
     gene            11951..13300
                     /locus_tag="QEL58_001161"
     CDS             11951..13300
                     /locus_tag="QEL58_001161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing histidine kinase"
                     /protein_id="HDS1675659.1"
                     /translation="MARRPSLKRPLIVKTLIYQLLALLVAFFALLMVLVRADSGGYYT
                     IQTFAPVAAEAVHRDSTGELYVEHTPELAELLKIVPGAWFIAEDEHGHHVTFGHVPPA
                     YASLVGALDGIPYGDLRGRDRSDGLAVAIRQHSGPAGKLTIMAHGETDSLTWQMALAA
                     HIITLPIFLLLGLATLILTPIIVRRALAGVERIAQEARNISASRRGIRLTETAVPVEI
                     APLVAAVNEALDRLDEGHERQRRFIAAAAHELRTPIAILRVKIDATDDATSRSLAVEV
                     ARLATLAEQLLDLHRMEEDGPKDSLNLARVAKRVVADLAPLLIQSDKTVAVAVEPNFP
                     VLGEAGAVERVLSNLVLNAAEHGGRHIIVRVQGSCLEVEDDGPGIPVDQRERVFEPFQ
                     RLRPRQTGAGLGLNLVRQVIDRHGGRVTILDAPGGGALIRVEFPLHPGVSSAPPPER"
     gene            13626..14039
                     /locus_tag="QEL58_001162"
     CDS             13626..14039
                     /locus_tag="QEL58_001162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019338181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675660.1"
                     /translation="MRLAGALFLLLPGMSLVAATFRHAPGTAAAIVLFVTLHAGLHML
                     AVWREAASRPIPSIPRVLDARAAGMMLAVTLPVIVLGATGPRPVITSAWLLAGAICQL
                     CSLRRVSQRLRHVLLALGSVLQFIAVTLLALGTVH"
     gene            14175..15365
                     /locus_tag="QEL58_001163"
     CDS             14175..15365
                     /locus_tag="QEL58_001163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006375116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HDS1675661.1"
                     /translation="MSAVPRKRRRVLIIAAVLLCTALLLFAWLRPAPPPRLEVAPVTR
                     GNIEQVVEATGTLKPSRLVSVGAQVSGRIETLHVKLGDKVKAGDLIAEIDSRTQRNAL
                     QSAQAAQRSARANRDALATDLRQYQLTLQRQQALVSRQLVARADYDAAKAKVNATREQ
                     IAALDGEVVQRQTDVDVAQTNLGYTRITAPTDGTVLAVVARQGQTVNAVQSAPTIVML
                     GNQDVMTVYAEISEADVVHTALGQEAFFTILGDSGRRYSSTLRDIAPAPESITNEDTS
                     GFSPAGASAGASRTAMYYNGQFDVDNADGRLRSYMTAQVRIVLGRAKGVLTIPSAALG
                     ARATDGSYNVQVRGADGHPAPRRITTGLDDQINVEVRSGLQEGEQVVLAQAGDATATA
                     AAQP"
     gene            15362..17332
                     /locus_tag="QEL58_001164"
     CDS             15362..17332
                     /locus_tag="QEL58_001164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MacB family efflux pump subunit"
                     /protein_id="HDS1675662.1"
                     /translation="MTGAEKDTPLLRVRGIRREFAAGEQTLVVLDGIDLDIRAGELVA
                     IVGQSGSGKSTLMNILGCLDRPSAGAYQIAGRETAQMSPDELAELRREHFGFIFQRYH
                     LLTDLTALGNVEVPAIYAGQPSADRHARAQALLQRLGLGERMQHLPGELSGGQQQRVS
                     IARALMNGGAVIFADEPTGALDTQSGKEVMKILGELHAEGHTVVLVTHDMAVAEHAQR
                     IIEIRDGRIVDDRPTAAATAAASSNPATLQVRSEGSGWQALRDRFGEAFRMALRAMNA
                     HRMRTFLTMLGIIIGIASVVSVVALGTGARQAILSNIASLGTTTIEVYPGSGFGDVHA
                     AQVETLTPGDSTALAAQPFVDSATPGVASSGTAQRGNRSANVQMQGVSEQYFRVHGLK
                     LGQGRFFAQPAITGYQQVVVIDANTRARFFAAQEDPIGQTLLLGNVPVRVVGVVKKEA
                     GAVGDASLLQVWVPYTTAMARMLGQSHVSSITVRVSDTVGMQAAESSIGRLLERRHGR
                     RDFYMSNNAQIRTSIEQTTRILTLMISSIAAIALVVGGIGVMNIMLVSVTERTREIGV
                     RMAVGARRSDILQQFLIESVLVCLLGGVLGISVALALGAVLALADIGFSLVFSSTSIL
                     AAFACSSLIGIGFGFLPARRAAQLDPVEALVR"
     gene            17424..17810
                     /locus_tag="QEL58_001165"
     CDS             17424..17810
                     /locus_tag="QEL58_001165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006375121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675663.1"
                     /translation="MFQKTGRTALLLGAALQLLVLIPYVGDAHAQDRDGYRSGWDRGY
                     HDRQRDEWERRERERERERRDDDKAKRVVVGVVGAAVVAGVIAAAAKRERETRERADY
                     CMNRYGNYDRRNDTYRGSDGYTYPCR"
     gene            17841..18218
                     /locus_tag="QEL58_001166"
     CDS             17841..18218
                     /locus_tag="QEL58_001166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008264805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EF-hand domain-containing protein"
                     /protein_id="HDS1675664.1"
                     /translation="MNKTLLIITLCAAPLIGHAASGDPKQAYIDSSFAVMDSNGDGRI
                     DKAEYAKYQQARFSKQADSIDAAFKEMDADKDGKISRKEAAVVPEIEKYFAGLDTDGD
                     GYLSLKEMQQAMVAAQTADAPAK"
     gene            complement(18395..18850)
                     /locus_tag="QEL58_001167"
     CDS             complement(18395..18850)
                     /locus_tag="QEL58_001167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675665.1"
                     /translation="MTRTSTRVLLGLCLIPAAAFAQSDRQVAEDMVTRAANVCPGHSS
                     ERTTPTVKKVPVGALRVMLDRGLVMCPDRRLDAAAPAVFYGRVGVFGWNPEVPAAATV
                     VVAKIDQMTRKDEYPVETLVWDAKGTALTQQTVPAFEPRPGAAVLYKVR"
     gene            complement(18953..19360)
                     /locus_tag="QEL58_001168"
     CDS             complement(18953..19360)
                     /locus_tag="QEL58_001168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014647606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675666.1"
                     /translation="MPDRTPDIPRLRQLLGAAACDLPAALAETLEAALCESAESVAPS
                     AFFAHLKGHGENLRADGQPWTETRLSPGRAFDLALATRSASGITALTAMLHAAHVARE
                     SDDPACCPSAALVEGLFNACQVLSLQVERCLVP"
     gene            19991..21187
                     /locus_tag="QEL58_001169"
     CDS             19991..21187
                     /locus_tag="QEL58_001169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011409850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAAR domain-containing protein"
                     /protein_id="HDS1675667.1"
                     /translation="MARNWIVMGDPTSSGGRVITASNRTDIEGMGVARMGDKATCPHM
                     HKGVFAIVEGDSTIILDGQPVALDGCALACGCRVISSQQLRVYVSNTATTGGTASPNM
                     AGTQRAETPLASGRRLQFDQAIRFTGSQGMPLRELPYTLHLANGQTFSGMTNALGETS
                     RVSTRESVAVVRAELRPPSATSGCCERTLLAGIDDAAVFDVDGVITTSDTMGTSIVPV
                     QVPSHERGLTQGEIEMAQLVFGDAIDYSLVRIHNHGYWMLFGMQPEDTVVAPNGEIYF
                     PKDLYIHDYSSGDLRNQQLFIHEMTHVWQHQLGYNVRLVRGPRPNMSYDYVLDDVRLL
                     HDYNMEAQGDILADYFLVAFRDSQSKMSNTRYRTTFGIHAQLKRVLSLFLASTSDKRN
                     LPRTTR"
     gene            complement(21778..22125)
                     /locus_tag="QEL58_001170"
     CDS             complement(21778..22125)
                     /locus_tag="QEL58_001170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDS1675668.1"
                     /translation="MRSRRWDGKSGCAVEVTLSVMGGVWKPIILFHLMTGKRRFMELT
                     RRVPNATQSMLTSQLRELEADGVVIRHVYAEVPPKVEYELSEFGRTLVPVLLAMREWG
                     ETYRGYQSTRGDS"
     gene            22228..23217
                     /locus_tag="QEL58_001171"
     CDS             22228..23217
                     /locus_tag="QEL58_001171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase"
                     /protein_id="HDS1675669.1"
                     /translation="MNFKALLTRKTDDGVSTELVDFDEANLMDGDVLVQVEYSTLNYK
                     DALALTHSRPVMRTYPLIPGIDLAGVVLESSNAGFKTGDRVVLNGWDLSMGHHGGLAQ
                     RACVRGEWLNKIPGNLTTRDAMAIGTAGYTAMLCVLALEDADVTPEKGDVLVTGANGG
                     VGSIAVAILSKLGYRVVAATGRPEHAEYLHSLGAAEIIDRAQFSEPRDRPVSNERWAG
                     VVDVAGGPTLVNAIAETKYRGAVAACGLAQSDALHGSVIPFILRNVTLAGVDSVNAPQ
                     DVRQRAWDRLATDLDPQKLESTVQQIGLAEVLEVYEKIIPGKVRGRIVVDVNA"
     gene            23338..26088
                     /locus_tag="QEL58_001172"
     CDS             23338..26088
                     /locus_tag="QEL58_001172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UvrD-helicase domain-containing protein"
                     /protein_id="HDS1675670.1"
                     /translation="MEWRPSGWGQRVTRSPPWRLRLDGEHLELTLGGEQYRQHVDGDH
                     RVQVVPGLFWARVALQTEGGTVSVGGLPNRQASQLAAAVQDVLSARSTRGRKGLFEDV
                     LAQIQAWLSAADALTDRGHASRRWITHEQQQALLADRPALPLSPDELERLFLDASVHD
                     DLRSSHHLAALEALNDWHLDWPAVWAEANDAMAMRELVLAKDFLDRVESRPLTEEQAR
                     AVICFDNRVQVVAAAGSGKTSTMVAKAAYAIDRGFVEPERIVMLAFNKDAAKELEERA
                     QRSFDRLGMGDTVVEARTFHALGLAIIGKATGRKPDIPEWAIDATQGFNKLAELVDDL
                     KDRSIHFRTQWDMFRLVFGRDLPPFGAEMMADGYDRDGTPYIRTLQGERVKSLEECVI
                     ADWLFYNGVAYDYERRYEFDTATDTHRQYRPDFYYPDAALYHEHFALDANGQPPKHFA
                     HYAESMHWKRQQHVARGTALVETTSFGLRSGHALHDLAETLGASDIELDPNPDRELPD
                     AGAKPMPDADLIGLMRTFIAHAKSNCLTLDDMAARLRQLPEDQFKERYRRFLEIAGPV
                     FQAWDNALADERGIDFEDMLNMAAGLLEQGHYASPYDLVLADEFQDASRARARLCRAL
                     VSQPGRHLFAVGDDWQSINRFAGADVSVMTGFREWMGHGQVLKLEQTFRCPQALCDVS
                     SRFISRNPGQIAKAVRSATPAMGPVLQAFQMNRREEVQDGVRQYLTRLHQQLLSGAVP
                     QGRNGRVTVFILGRYQADRSAVPAEWRTSFGSTMDVEFLTAHRSKGREADYVILPGMV
                     NRGFPSLRSDDPVLSLTMPEGDTYPLSEERRLFYVALTRARRSVVMFTLQGKHSPFLD
                     ELVNDGAVKVTGISGAAINEERCPVCKVGVFVERNGPHGAFRSCSSYPLCHNKPGRYR
                     SN"
     gene            26267..26842
                     /locus_tag="QEL58_001173"
     CDS             26267..26842
                     /locus_tag="QEL58_001173"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675671.1"
                     /translation="MVDWTGSNAAAWAQAILSGLAILYSGRLAYGQSRSAKREKIDTY
                     VALLYEADEAAECAVEVLRDAANESVEVVAPPMDFAGLERSFREVPFNEVPDHRLVRV
                     LRSAAFSCFQLSLRYDKVVDGTTRVCTFHFELAESEAKTIRALRLEAEAISNSYMTLP
                     ARAMYFAWRMKISAIGALRPHKIESPRDRES"
     gene            complement(27306..27986)
                     /locus_tag="QEL58_001174"
     CDS             complement(27306..27986)
                     /locus_tag="QEL58_001174"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675672.1"
                     /translation="MSFWSGMFRCDRLGVDDCVVWWDAIASLSAVFGVLVAGLAALIA
                     VAGVVVAALSAFAVFQLGRKANKIAAAPHEIAREDREREGKFLLIYLHPEFLDVHSSI
                     VAWRNHALKWDASFISWGEAQRRKALMAIQSLSFPLTEERISRLHLLDPEIGYKLARC
                     LNTVRFLKLTIDATVHMKDTGQLKIQLHSLRETAKALDNDLGAVIVAAESEIYPSIGV
                     EKAAADSP"
     gene            28050..28229
                     /locus_tag="QEL58_001175"
     CDS             28050..28229
                     /locus_tag="QEL58_001175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675673.1"
                     /translation="MADNLNQAKHTARVCLSGCRARRHGHSFWFAFNAAQSARMRASA
                     PATLPAPPTQPDLFA"
     gene            28322..28429
                     /locus_tag="QEL58_001176"
                     /pseudo
     CDS             28322..28429
                     /locus_tag="QEL58_001176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010480570.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="AlpA family transcriptional regulator"
     gene            complement(28495..28584)
                     /locus_tag="QEL58_001177"
     tRNA            complement(28495..28584)
                     /locus_tag="QEL58_001177"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(28548..28550),aa:Ser,seq:tga)
     gene            complement(28689..29681)
                     /locus_tag="QEL58_001178"
     CDS             complement(28689..29681)
                     /locus_tag="QEL58_001178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017357441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDS1675674.1"
                     /translation="MHDLNDLYYFAMVVDHGGFAAAERALGIPKSRLSRRISQLETDL
                     GVRLLQRSTRRFAVTDVGTSVHRHAQTMLAEAQAAREVVDRLSAEPRGVVRASVPVSL
                     AQMQLPKLLPKFLEQYPKVRLQLNISNRRVDIINEGYDVALRVRSRLDDDGSLVMRSF
                     GQVQELLVASPKYLDRAGRPKDPEELTQHVTLSISEDEARQRWELHGPEGEVRRVDLQ
                     PRVAGFDFPLLQSMVKDGFGITMLPETVCADAVRNGELEVVLPDWSLPQGVCHAVFAS
                     RRGLLPAVRVFIDFLAEHLPPQLEASRLDCGGACEKAKERIKASALGALAVDAG"
     gene            29809..30396
                     /locus_tag="QEL58_001179"
     CDS             29809..30396
                     /locus_tag="QEL58_001179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012480714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HDS1675675.1"
                     /translation="MKLLHLDASVLGDNSVSRQLSAAVVARFTGQIDGLQVDYRDLDA
                     NPVPHLRSSSLAKTDAAEATDAEQVMQQFLDADIVVIGAPMYNFSIPSTLKAWIDRVA
                     VAGRTFKYTENGPVGLAGGKRVIIASSRGGIYTDSPADFQEPFLRQVFAFMGINEVEF
                     VRAEGIAYSPQHREDAIAGALATLPSHEVAEAVAA"
BASE COUNT         5419 a        10115 c         9789 g         5091 t
ORIGIN      
        1 tcgaatgccg gtgagtactg cacctcgccc tgcgccatcg gtgggcgcag gcagagggcc
       61 tggaagtact ccgcgggcac gcccggcagt atcaggcctg ggtcggcgcg gaaaccgaag
      121 cgtccgtaat agcccggttc gcccagcagc acgcagcccc gtgctccctg ctggcgcagg
      181 gcttcaagcg cggcacgcat cagcgccgca ccgatgccct gcccttgcca tccaggcaat
      241 accgagatcg gaccgaggcc gaaccagccg ctgctgccat cgctgaccgc caccggcgaa
      301 atcgcgacat ggccaacccg ctcgccatcg gcctcggcca ccagcgagac cgccagctcg
      361 ccacgcgcgc gcagtgcatc gacgatgaag tgttcggtat ggctgctgtg ctcggcggta
      421 gcgaaggctg cggctgtcag cgcatggatg gcggcgatgt cggccgcggc ttcattgcgg
      481 agggtgtagt tcaaggggca cctcgatcga tgcggcgcac ccgggcagcg ggtacgcggt
      541 gaaggaaaag gattgccatg gcgtgcatca gcgattgtcc agctgcgggc gcaccgcaac
      601 cagtccggcg cggttgatgc ggtagggacg accgtcatgc gaactgatca ggcgcttgtt
      661 cttcagcttc ttgaagacgg ccagcgtgca atcgctcagc aacaggcctt cacgattgaa
      721 gcattcaacg ctgcggacac ggccagagcc gtcgcggctg aaggcaatgc agccgccctg
      781 ggcgagaacg tgcaacgtcc tctgctccgc tcgggagata ttcatgggaa aagagatcct
      841 gcgtaatcgg aaatgcggac gacacgggct gccaacggca cccggccagg ggaacacgca
      901 ttcgataacc actcccggca gacacacggg aagggttatc cgatgacggc aatctccaac
      961 atgaaaaact acactcggca ggcgcctgcg tgctgcaggc acgcgcacgt tacccagccg
     1021 cctgcggcgg gtcaacctcg gcactaccgc gattgggcga taatttatct ttcatccgca
     1081 ggagccgacg atgcagcagc caacgatgga ctgggtggca caggcgcgcg cactggcgac
     1141 ccaggcccat gccgggcagc aggacaaggc aggccagccc tatatcgagc acgtggcgcg
     1201 cgtggcggcg gcgatccatg acgatgacat ggccaaggcg gctgcctggc tgcacgacgt
     1261 ggtcgaggac tgcccccagt acgcggcgca ggtgcaggcg ttcccggcgc cgatccgtga
     1321 caccgtgagc ctgctcagcc ggcacaccgc cgctgatgcc gatcagtact acgcgcgcat
     1381 ccgccagcat ccacttgccc tgaaggtgaa gttggccgac atcgccgaca acgcccaccc
     1441 gcgccggctg ctgcagctcg ccccggcact ggccgaccgc ctgcgcagca agtacgccgc
     1501 cgcgctggtc gcccttggcg gccaacgcgc ggccaccgcc acacccgcta cggcaaccac
     1561 acggctgctg cagctgatgg atgcagcaca cacgttggca gcgctggcca gcgaacctga
     1621 agtgaccgcc ggcggcggcc aggacgctcc gtacccacgc caggcggcgc tgctcaccgt
     1681 atgcgaagtc gtgcgtgccg aagtggaggc acagatgaca ccggagacct tcgtcatctg
     1741 gagcgacatg tacgtgcagc cctgaccacc gcccgatgca gcccgggtgc caccggtcaa
     1801 acgctgattc ttggccatgg gcactgatca ctgctgcggt gcagcagtac aatgggcggc
     1861 tccccgtccc catcgcgccc ccgcatgagc cccaactctt ccctggctgc gcggctgacg
     1921 ccccgtcagc gcaccctgat cattctcgcc ctgtcattgg gcggcttcgc catcggcacc
     1981 agcgagttcg ccagcatggg cctgatgctg gagatcagcc ggggcctgtc gatctctgaa
     2041 acccaggtcg gtcacctgat cagcgcctac gccatcggcg tggtggtcgg tgcgccgatc
     2101 ctggcgttcg tcggcgccag tttcccgcgc cgcaagctgc tgctggcgct gatgggcttc
     2161 tatgccgtcg gcaacctggc cagcgcgctg gcgccgaact acgccaccat gctgctggcg
     2221 cgtttcgtcg ccggcctgcc acatggcgcc tacttcggcg tggcgatgct ggtggctgct
     2281 gcgatcagcc ccgccggcca gcgtggccag gcgatgtcgc gcgtgctgct cggcctgtcg
     2341 atcgcgatcc tggtcggcaa tccgctgacc acctggctgg gccagcagct gagctggcgc
     2401 accgccttcg ccttggtcag cctgctggcc atcgccaccg tggtgatgat cgcgcgcttc
     2461 ctgctgcccg atccggacga ggtgcgtacc tcgccgatgc gcgaactgcg cgccttcaac
     2521 accacccagg tgtggctggc gctggcgatc ggtgcggtcg gtttcgccgg tatgttctgt
     2581 gtgttcacct acctggcacc gaccctggtg caggtcaccg gcgtggccga atcgtggatg
     2641 ccgctggcgg tgggcgtatt cggcatcggc gcgatcatcg gcaacatcgc cggtggctgg
     2701 ctggtggaca agttccactt caaggccgcc gccgtggtgc tgctgtggtc gatcgtgatg
     2761 ctgttgctgt atccgctggc ggcgcagtcg gtgtggacga tcggcccgat gatcatcact
     2821 gtcggcacca tgggcgcgct ggcggcggtg ctgcagaccc gcctgatgga cgtggccggc
     2881 gaagcacaga cgcttgccgc cgcttccaac catgccgcgt tcaataccgc caatgccctg
     2941 ggcccctggc tgggcggcat ggcgatcagc gccggcttca gcccggccag caccggctac
     3001 gtcggcgccg ccactgccct cggcggcctg ctgctgtggg gtgtggcggt gatgctggac
     3061 aggaagcgca agcacgccgt cgccggcagc cactgagcat cgcgccgggt cgtcagtcgc
     3121 tgccggtgcg gcggcggcgg cccggtcgca gcaacgcacc atcgccggct gccagcgtgg
     3181 gtcgtgccag ttcgccacgc tgtacgcggt ccagtacccg ccgtgaattg gccgcgcaat
     3241 caatgccgtc cggccgcgcc tggatatcct cgatcaaggc cagcaggtgc gcccggctct
     3301 gcgcaaggcg cagttgcagc gcctcgatat cggccacctt ccgccgcagc atcgtgatca
     3361 gcgcatcgtg ctgccactgg cccatgtccg gcggcagcag cgcgcggatc tcttccaggc
     3421 tgaagcctgc gcgctgcgcg ccgatgatca gctccagcag cagcaccgcc tgctccgggt
     3481 agtcgcgata gccgttggcc tggcgctgca ccaccagcag cccggcatcc tcgtagaagc
     3541 ggatgcgcga cgcggccagg cccgtgcggc gggccagctc accgatcttc atgggcctga
     3601 atcctcgaca tcggcaccgg ttgaccttca atcaaacttg aaggttagcg tagcgccatt
     3661 cccctgtccc ggagctgtcc gatgtccctg ttctcgccgc tggccctgcc ctcgggcgct
     3721 gtcatccaca accgcatcgc caaggccgcg atggaggaaa acatggccga cgccgaccac
     3781 gcgccctcgc ccgcgctgct ggagttgtac cagcgctggg ccgacggcgg tgccgggctg
     3841 atcatcaccg gcaatgtgat ggtcgatggc cgtgccatga ccggaccggg cggtgtggtg
     3901 ctggaagacg accaccacct tgatcgcttc atcgcctggg cggacacggc ccgcgcgcgc
     3961 ggcgtgcaga tgtggatgca gatcaaccat cccgggcggc agatgccggc cgcgctcggc
     4021 caaccggcgc tggcgccttc agtggtgccg ctgcagatgg gggcgttgtc cagccagttc
     4081 gcaccgccgc gggcgatgac cgaggccgac atcgaagagg tgatcgcgcg cttcatccgc
     4141 agtgccgagc tggccgagcg tgctggcttc agcggggtgg agatccacgc cgcacacggc
     4201 tatctgctca gccagttcct gtcgccgctc tccaaccacc gcgatgatcg ctggggtggc
     4261 agcctgcaga accgagcacg cctgctgctt gagatcgtgc aaggggtgcg cactgcggtg
     4321 tcgcccacgt tcgcggtggc ggtgaagctc aattccgccg acttccagcg cggcggcttc
     4381 tcgccggagg acgcgcgcgc ggtggtggag atgctggccc cgctgggtgt ggatctggtc
     4441 gaactgtccg gtggcagcta cgaagcaccg gccatgaccg gcgccgcgcg cgatgaacgc
     4501 agcctcgcac gcgaagccta tttcctcgag ttcgcacgcg agatcgccac agtggcgacg
     4561 atgccgctga tggtcaccgg cggtatccgc cgccacgcgg tggctgagca ggtgctggag
     4621 agcggtgttg cgatggtggg catcgccacc gcgctggcga tcgaaccgga cctgcccaaa
     4681 cactggcagc aggggcacga cgcggtgccg atgctgcgca tcattgattg gcgcagcaag
     4741 ccgctggcgg ccagcgcaca catggcggcg gtgaagtacc agctgggtcg gctgagccgg
     4801 tgccgcccca ccgcgcccgg cgtctcaccg ctgtgggcgc tgctgctggc gcaggcagcg
     4861 ggcaggtgcc ggacccgtcg ctacaggcgc tggatcgctg cgcgcgcagg cagccgctga
     4921 acaggcaggc ttctcatcgc ggcggcgatg ctccaccatc tgcgtgatcg gcggcaatcc
     4981 gctcccgatc acagcaggca caaggaaccc acgtggcagc agcaccgacc aggaaccgcg
     5041 aaaaactgct cgatgacctg ctctcgctcg gccgcaactg ggcactggcg attgccatcg
     5101 ccggcgcggg ggcagcagtc cattacagcg aaacggtgta cgaggccggg ctctggcgcg
     5161 ggctgctgcc cacgctgtgc ttcctggtcg ccatcatctg gatcgtgctc agcatcatcc
     5221 gcttcgacct gaccctccag caacacttcg agcgcaagcg cacgcgctgg ctcagccgcc
     5281 tgttgtatgt ggtgctgttg ggcaccggca taacggcggt gttcttcgtc accgaactgg
     5341 cggccagcaa tcacatcgcg cggatgtgcg attcggtcgc caacgaaccg gcaagccgca
     5401 tctaccggtc gagcgaatgc cagcgcctgt accagcatcg cgcggcgtac cggaagcgac
     5461 tggaatcggt cgagggcgag ttcgactgag ccgcgttggg cccacgaaga acacacggcg
     5521 tggatatgca gtcgggcaca gtacgtgcgc cgctcacgct tggacccatc cagccaccat
     5581 gcttcacgcg cccgcccctg cacgtcacga tgccatcgcc ctgcaggcag gcattctcgg
     5641 cagtgtgctg ggcgttgcgg cgttcaaggc ggttgcgctg tcggcgctgg cgagtggatc
     5701 actgatggtg atcggggtgt ggatgctggc ctgcgccctg ctgggcgcct gggccctggc
     5761 cgcctacctg gcgtgtctgg cgctgagccg ccgcgtgttc gtgctgatgc tggccctgtg
     5821 cgtggtactg atggcctgca tcgcctgacc gcatcgggcg ccggactatc gcgcgattgt
     5881 tacagaataa caagtgcgat cagtccgatt gcctgtgcct ggggtcacag cctggaatgg
     5941 cagggccact ccggcaccac cccgagactt ccgcatgaac ctgccgcccc tgctgcgcac
     6001 ctcactcacc gtccttgtat tggtcccgct gggtggctgt gccacctacg acgacagcgc
     6061 gatgcacccg gcctgccagg aatcgccgca tctgaaggat ctgccgcgcg acgtggcagc
     6121 ccgcgagagc cactgcaaca aaggcatgga agtgtggtcg agcgagcgca aaggcagcga
     6181 caaaccactg gacctgagcg gcaagaaaaa ggatctgtaa gcgcagccgg cgcagcccgg
     6241 atcggctgcg ccgccatcgt gcaggtcagc ggacggccgc cgtcccgaac cagcgctgca
     6301 gcgcgtgagc caatccggtc gggtcggcgc ccgcaccgca ggcccaggcg acgatgccat
     6361 cggggcgcac cagaaccgcg cccaggcccg tcgcctcatc cggcaccgat cccatgcaga
     6421 cagggtgcga tggcgcatcg cccatgatgt tgcacggcaa cgattccaca tcgaacacga
     6481 gcagcgcccc ctgcccggcc ctcagcagct cgccggtgcg acggccgtcg gccagcacga
     6541 agtccggcac gctgcgaccg accagcgggt gcccatcgcc cagcgccagc tgctgcgcca
     6601 ccccccagac ccgctcggcc agataggtcg cgccatcgcg ggtgtcggcc agatcggcga
     6661 tgacggccgc cagcgcgcgc gaaccggcgc ccggccgcat cagcgcgacc tgcgcacgcg
     6721 accagtccag tacctttgcg ccgatcggat gccgctcggc ctgatagctg tccagcaagg
     6781 cctctccggc atcgccacgg accacggccg ccagcttcca gcccaggttc attgcatcgc
     6841 cgatgcccag gttcaacccc tgcccaccca acggtgaatg catgtgtgcg gcatcaccgg
     6901 ccagcagcac gcgaccgttg cggtaggcgc tggcctggcg cgcggcgtcg gtccaggtgg
     6961 tggccaggtg cagcgcggtg atcgttgcat tgcgaccgga cacgcgccgc agcagcgctt
     7021 gcgccgacgg caggtccagc gccgtgcgat ggccagcgcc gccgtcgaaa tcggccagtg
     7081 ccagcacacc cggaggattg aaattgcaca tcccatgcgc ggtgtactgg cgacccggcg
     7141 tgagcatcga aggatcttcc agttcgacga gcagggaatg gccggtgaac tccggttcgg
     7201 ttccttcgaa gctgaaaccc gattgcttgc gcacggtgct gcgggcacca tcgcagccaa
     7261 ccagccagcg gccgtggacg gtgccgtgtg tggtcgtctg cacagcgacc tgagcctcct
     7321 ccacctgcac cgcctgtacc gcgcagccgc gatcgatgtg cacgcccagc ccgactgcgc
     7381 gctcggtcaa taccgcttcc agcgcctgca gctcgatcgc catctgcgtg ccgaccggcg
     7441 ttggcacgcg ccagttccag cgcccgctgt ccacgttgtc cagcgcgaac ggaatgccgg
     7501 cgaagtggcc ccccaacggc cgcggctgcg ccagccagtg cgccgtgccg ggcggggggg
     7561 cgcccttgtc cggcttcagc acctgggccg cggcaaccgc gtccagcagg ccgcgccgat
     7621 ccagcgcctc cagggtgggg gcgttcaagc cgcgcaggcc cagcggcaag cgtttcagcg
     7681 gggattcggc ggactcggcc tgttccagca cccgcaccga acagccggcc tgggccagtt
     7741 cgcaggacag gaacaggccg accgggcccg caccggcgat gacgacgtcg tacagcattg
     7801 ggacttcctc gtgagcaccg ggccggcgct ctggcgatca taatgttaca ctcggtgtac
     7861 gtttctacaa gtgaacctcc gatgacccca tccccgggcc gccgcgagca gcgcaaggcc
     7921 gagacccgac aagcgatttc agacgtcgcc accgagctga tcatccggcg cggcttcgag
     7981 gcggtgtcga tgtccgagat cgccgaggcc gccggggtct cgcgcaagac ggtcttcaac
     8041 tacttcgcca gcaaggaaga cctggtcttc gaccgcgacg aggaggcgcg cgctttgctg
     8101 cgcgacggca tgctggcccg caacgacatg accccgctgg gcgccttcca gtcactggta
     8161 cggcaactgc tggacagcgg ccatccgctg ctgcggatca acgccggcgc agcggcgttc
     8221 tgggcgaccg tagccgacag tcccgtgctt gtcgcgcacg cgcgcaggct gcaggcgcaa
     8281 ctgagcgacg acctggcgca gctgatggcc gatgctgccg gcaggcccgc cagcgatgcc
     8341 gaggcaaggc tgggcgcggg catgctgatg gcgtcgatgg tggcggccta cgagaagggc
     8401 ctggccagcc agcggcaggg tgaagacccg cgcgaggcca tgcagcagct gatcgtgcgt
     8461 ggcgccaccg gggtgctggt ggccttggca ggcacgccgt atacagaccc ggccttgcgt
     8521 ccatagcgca ttcgggggat aggtcacgaa gtgttgcaaa tgccaatctt tctcatttgc
     8581 aaccaccccc acctcgcccc catgcccctt tccgctcctc tgccgcgcgc cctgtgcctt
     8641 gcgctgggcc tttccctgac ctccctcgca ctggccgccg agaccccggc agacgccccc
     8701 agggacctgg acaaggtcga agtccgcggc cgtgcgcaga ccctctaccg cgccaccgat
     8761 gcggccgttg gtactcgtac cgacaccccg ctggagctgg tcccgcagtc gatccaggtg
     8821 atcccgcgcg agctgatcga cgaccaggcc gcgcgccagg tgaccgacct gtaccgcagc
     8881 atcagcggca tcagcttctt cagctatgcc ggcgtgaccc tgcgcggctt ccgccaggag
     8941 aacgtgctgt acgacggcct gcgtggcgat ccctatgcag gtttctcggt accgcagctg
     9001 ttcaacatcg agcgcgtgga ggtattgaag ggccctgccg gtgcgctgta cggcggcggc
     9061 gatgccggcg gcgtcatcaa ctatgtgacg cgcaagccga aggctcgtgc cgagcgccgc
     9121 atcgagctgc aggtgggcga caaggatttc cgtgcgggct cgatcgaagg caccgggccg
     9181 ttgaatgcca ccggcagcgt tcgctatcgc gcaggcctgt atgccgacag cgaagagggc
     9241 gtgcgctgga acgccgacag cgaaagcgtg atcggcgatg cgtcgctggc cttcgatgtc
     9301 ggccagaccg gcgaactggt gctgcagttc accgacatca cccagaacct gggcggcaac
     9361 cgcctgcgcg gtgtgccggt gaacgatgcg gggaccttcc tgaccgaccg ccgctggaac
     9421 cacaacgagg ccagcgactt cctcgacatg cgcgccaagg tggcattggt gcagtaccgc
     9481 ttcgcaccac gcgacaccct tgacgtggac gttgccgcac gctggttcag caacaacgag
     9541 caccagatgt accacgagcc gatggggctg atcgaccgtg accgcgatgg cgtggccgag
     9601 tggatgacgc gccagctgcg caaccagatc cgcgacaacg aggcgttcac cgccagcgcg
     9661 aatgcggtct ggcggatcaa caccgggcgc atcgaacaca aggtgttgtt cggcgccgat
     9721 gtgtaccagc tcgacgccga cttcaccgca cagaccgcca acagcgccga cctggcacgc
     9781 ggcgccggcc cggtgcgcgg catcgatctg ttcaacccgg tctatggcgc cagcacctgg
     9841 catgactaca acctggccgc gctgccctgg cgcagcacct ccacgcgcag caagcgctac
     9901 ggcggctatc tgcaggatga gctggcgctg ggcccgcgct ggcacgtgct ggccgggctg
     9961 cgctgggatg gcttcaagga tgaggaccgc ctgggtggca gcggcgtgga aggcaacgac
    10021 ctcagctggc ggctgggcag caccttcagc gtatgcgagg ggctgaacgt atacgccaac
    10081 gtggccagtg gcttcgtgcc gcagagcgcg gccaaccaga acccggccgc gggcggcccg
    10141 ttcgacgccg agcgcagcag gcagtgggag gttggcctga aatccctgct ggccgaccgc
    10201 gtgaccttga acatggcggc ctaccgcatc gaccgcagca acatcgtgca ggccaccggc
    10261 gaggtgatcg gcggggtgaa ccagctggcc gcactgggcc tggtgcgcag caccggcatg
    10321 gaactggacc tgctggccga catcaccgag cgctgggtgc tgaatctgac ctatgcctac
    10381 aacgacgcgc gggtgaagga tgccggtcca ggcggcatca ccaatgcctc gggcgaccgc
    10441 ttcgccaacg caccacgcaa caaagtgggc ctgtggacgc gctatgacct gccctcgatc
    10501 aactcagcga ttggcttcgg cgtggatcat gtcggagaac gtgtcagcct ggacgggcag
    10561 acggtgaagg cctacaccgt gttcgatgtg agctggaaga ccacgtggaa gcagtggcag
    10621 ttccaggcca acgtcaagaa cctgttcgac aaggtgtacg ccgccagcgg cttcatcgag
    10681 cgcaacgggc acttcccggg tgaaccgcgg cgggtgtatg tgcaggcggc ctacagcttc
    10741 tgaggccgtg ctgcagggag cagcggggga agtggcaacc cacctcccct gccagcgtca
    10801 gtgcgagcag gacaccagca tcgagcgggt ggccatctga gtggaggtga agccgttcct
    10861 gttgcccacc gcgatggcat ttccttcatc gccatccttg ctgaagacca catagcctcc
    10921 cgggcacatc tgcccggcct tctcgtagca gccactccag gaactggagc cgctgcagtc
    10981 gatggacacg ccacggcggc catcgggggt gacggtcatc ctggcggtgg tacagccgcc
    11041 cagcgcggca acgaacaaca gcggaacgta caacttcatg ggcactccag ggttggggat
    11101 cagcagacgg gcgccaaggc tggagtgccc ggattgcgcg aaccttgcgc cagatggcct
    11161 caccgctgcg gggctcgccc tgcgttggca cgccatgttc acgcaatgtt cctgtaatac
    11221 ggtgccggcg cctgccgaag tcccgctgcg ccccccttcc cgcccgcttc ccgccgatgc
    11281 acatcctgct gatcgaagac gaagccgaac tggctgccac gctgaagtcc gccctgcagc
    11341 gcgagcgcta cgtggtggac ctggccaaca cgctggcact ggcccgcgaa gcggcacttt
    11401 ccgggtcgca cgatctggtg ctgctggacc gcaccctgcc cgatggcgac gggctgggcc
    11461 tgattccggt gctgcgcggg cacaacccag gggtaccgat catcgtgctc agtgcgctgg
    11521 gacagttgcc ggaccgcatc gccggcctgg atgaaggggc cgacgactac ctggccaagc
    11581 ccttcgcgct ggaggaactg ttcgcacgga tccgggcagc cgggcgccgg ccgggcggca
    11641 tgcaggtaga gccggtgagt atcggccggc tgctgttcga ccccgcctcg ggcgaggcca
    11701 cggtaggtgg gcagcgactg gagcttccgc gccgcgagat ccgggtgctg gccgccctcg
    11761 cccgccggct gggccgcacc gtgctgcgcg agtccatcga aatggcggtg tatggcttcg
    11821 acgacggcat ccattccaac acgctcgact cgcatgtctc gcgcctgcgg cgcaaattgg
    11881 ccgacgccga tgccggggtg gaaatccatg ccatccgcgg tgtcggctat ctgatgcggg
    11941 aaacgaagta atggcgcgac gcccctccct gaagcgcccg ctgatcgtca aaacgctgat
    12001 ctaccagctg cttgcgttgc tggtggcgtt ctttgcgctg ctgatggtgc tggtgcgtgc
    12061 cgacagcggc ggctactaca ccatccagac ctttgccccg gtggccgcag aggccgttca
    12121 ccgcgacagc acgggcgaac tatatgtgga gcacacgcct gagctggccg agctgctgaa
    12181 gatcgttccc ggcgcgtggt tcatcgccga ggatgagcat ggccaccatg tgaccttcgg
    12241 ccatgttcca cccgcctatg cctcgctggt cggcgccctg gacggcattc cctatggcga
    12301 cctgcgcgga cgcgaccgca gcgatggtct ggcggtggcg atacgccagc acagcggccc
    12361 ggccggcaag ctgaccatca tggcccatgg cgaaaccgat tcgctgacct ggcagatggc
    12421 gctggccgca cacatcatca ccctgccgat cttcctgctg ctgggcctgg ccaccctcat
    12481 cctgaccccg atcatcgtcc gtcgcgccct ggctggtgtg gaacgcatcg cgcaggaggc
    12541 ccgcaacatt tccgccagcc gtcgcggcat ccgcctgacg gagaccgccg taccggtaga
    12601 gatcgccccc ctggtggcag cggtgaacga agcgctggac cgcctggacg agggacacga
    12661 gcggcagcgt cgcttcatcg ccgccgccgc ccatgagctg cgtacgccga tcgcgatcct
    12721 gcgggtcaag atcgatgcca ccgacgacgc cacgtcccgc agcctggccg tggaagtcgc
    12781 gcggctggcg acgctggccg aacagcttct ggacctgcac cgcatggaag aagatggacc
    12841 gaaggactcg ctcaacctgg cccgcgtggc caagcgggtc gtggccgatc tggcgccgct
    12901 gttgatccag tccgacaaga cggtcgccgt cgcggtggaa ccgaacttcc cggtgctggg
    12961 cgaggccggt gcggtcgagc gcgtgctttc caatctggtg ttgaatgcag ccgagcatgg
    13021 cgggcgccat atcatcgtgc gcgtgcaggg cagctgcctg gaagtggagg acgacggccc
    13081 cggcattccg gtcgaccagc gcgagcgcgt gttcgagccc ttccagcgcc tgcgcccgcg
    13141 ccagaccggt gccgggctgg ggttgaatct ggtgcggcag gtgatcgacc ggcatggcgg
    13201 ccgcgtcacg attctggatg cacccggcgg cggcgcattg atccgcgtcg agttcccgct
    13261 gcatccgggc gtcagcagcg cgccgccacc ggagcgctga gcgcagcgta cctgcggggc
    13321 tgactgcccg ctgtccacgc ctggcggccg gagccgatgc gcaaggttgc ggcaatgttc
    13381 gccgcacagc atctgcaggc gtggcattgc tcatgatgcc gcgtccgggt ctgacaggaa
    13441 gcctgcatgt gacacaggga gcgcatccct cttcgtctac cacgcgtact ccgccccccg
    13501 gctgtacgtc cagtctgacc gcggcagcgt ggaatcatcg cgcgcgaacg tggcgcagcc
    13561 gtggcggcaa gcactggccg cactggctgc ggatacctgc cgaacccgag cgggtggacg
    13621 ccctgatacg cctggccggc gcactgttcc tgctgttgcc tggcatgtca ctggtggctg
    13681 caacattccg ccacgcgccg ggaacagccg ccgccatcgt gctgttcgtc accttgcatg
    13741 cggggctgca tatgctggca gtgtggcgcg aggcagcatc ccgaccgatt ccctcgatcc
    13801 cccgggtgct ggacgcgcgt gccgccggca tgatgctggc cgttaccttg ccggtcatcg
    13861 tcctcggtgc cacaggtccg aggcccgtca tcacgtcagc ctggctgctg gctggcgcga
    13921 tatgccagct ctgcagcctg cgccgcgtgt cgcaacgcct gcgccacgtc ctgctggcgc
    13981 tcggcagcgt gctgcagttc attgcggtaa ccctgctcgc actcggcacg gtgcactgac
    14041 aggccggcac cgccgcaagg ttcacgcaat ccagcacatc gagactcgac gaccatccac
    14101 acctgtcacc gcaggcgtgc atcccatctg tcgcgaggac ccacgatgcc ctgtcttttc
    14161 tggatgctga gccgatgagc gccgtaccgc gcaagcgtcg ccgcgtgctc atcattgccg
    14221 ccgtactgct ctgcaccgcg ctgctcctgt tcgcctggct gcgacccgcg ccaccgcctc
    14281 gcctggaggt ggcgccggtc acccgtggca acatcgaaca ggtggtggaa gccaccggca
    14341 cgctgaagcc ctcgcggctg gtgagcgtgg gcgctcaggt ctccggccgc atcgaaaccc
    14401 tgcatgtgaa gctgggcgac aaggtaaagg ccggtgacct catcgccgag atcgactcgc
    14461 gcacccagcg caatgcgctg cagagcgcgc aggccgccca gcgcagcgcc cgcgcgaacc
    14521 gtgatgccct ggccaccgac ctgcgccagt accagctgac ccttcaacgc cagcaggcac
    14581 tggtttcaag gcaactggtc gcacgcgccg actacgatgc ggcaaaggcc aaggtcaatg
    14641 ccacgcggga gcagatcgcc gcactcgatg gcgaagtggt gcagcggcag accgatgtgg
    14701 atgtggcgca gacgaacctg ggctacacgc gcatcaccgc gcccaccgat ggcaccgtgc
    14761 tggccgtggt cgcgcggcag ggccagaccg tcaatgcggt acagagcgca ccgaccatcg
    14821 tgatgctcgg caaccaggac gtgatgaccg tctacgccga aatctccgag gccgacgtgg
    14881 tgcacaccgc gctgggacag gaggcgttct tcaccatcct gggcgacagc ggccgacgct
    14941 acagcagcac gctgcgcgac atcgcgccgg caccggagtc aatcaccaac gaagacacct
    15001 ccggcttcag tccggcaggg gcgtcggcgg gtgccagccg caccgccatg tactacaacg
    15061 gccagttcga cgtggacaac gccgatggcc gcctgcgcag ctacatgacc gcgcaggtgc
    15121 gcatcgtgct ggggcgtgcc aagggcgtgc tgaccattcc ctcggccgcg ctgggtgcgc
    15181 gcgccaccga tggcagctac aacgtgcagg tccgcggcgc ggatggccac cctgccccgc
    15241 ggcgcatcac caccggactg gacgaccaga tcaacgtgga agtgcgcagt ggcctgcagg
    15301 aaggcgagca ggtggtcctg gcccaggccg gcgatgccac cgccaccgcc gccgcacagc
    15361 catgaccggc gcagagaagg acacaccgct gctgcgcgtg cgcggcatcc gccgtgaatt
    15421 cgccgctggc gaacagaccc tggtcgtgct cgatggcatc gacctggaca tccgcgcggg
    15481 tgaactggtg gccatcgtcg gccagtccgg ctcgggcaaa tccaccctga tgaacatcct
    15541 gggctgcctg gaccggccct cggccggcgc gtatcagatt gccggtcgcg agactgcgca
    15601 gatgtcgccg gacgaactgg ccgagctacg ccgcgagcac ttcggcttca tcttccagcg
    15661 ctaccacctg ctgaccgacc tgaccgcgct gggcaacgtg gaagtgccgg ccatctatgc
    15721 cggccaaccc agcgccgacc gccatgcccg cgcgcaggcg ctgttgcagc ggctgggcct
    15781 gggcgaacgc atgcagcacc tgcctggcga gctgtccggc gggcagcagc agcgcgtgtc
    15841 catcgcgcgt gcactgatga acggcggcgc ggtgatcttc gccgatgagc ccaccggcgc
    15901 actggacacc cagtccggca aggaagtgat gaagatcctg ggcgagctgc acgccgaagg
    15961 ccacaccgtg gtgctggtca cccatgacat ggccgtggcc gagcatgcgc aacgcatcat
    16021 cgagatccgc gacgggcgca tcgtcgacga tcgccctacc gctgccgcga cagcggcggc
    16081 ctccagcaac ccagccaccc tgcaggtgcg cagcgaaggc agcggctggc aggcgctgcg
    16141 cgaccgcttc ggtgaagcct tccgcatggc cctgcgcgcg atgaacgcgc accgcatgcg
    16201 caccttcctg accatgctcg gcattatcat cggcatcgcc tcggtggtat cggtggtcgc
    16261 cctgggcacc ggcgcacgcc aggccatcct gtccaacatc gcctcgctgg gcaccaccac
    16321 catcgaggtc tacccgggct ccggcttcgg cgatgtgcac gcggcacagg tggaaaccct
    16381 gacgcccggc gacagcacgg cactggccgc gcaaccgttc gtggacagcg ccacgcccgg
    16441 cgtcgccagc agtggcaccg cccagcgcgg caaccgctcg gccaacgtgc agatgcaggg
    16501 cgtgagtgag cagtatttcc gcgtgcacgg cctgaagctc gggcaaggcc gcttctttgc
    16561 ccagcccgcc atcaccggct accagcaggt ggtggtaatc gacgccaata cacgggcacg
    16621 gttcttcgcc gcacaggaag accctatcgg ccagaccctg ctgctcggca acgtaccggt
    16681 gcgggtggtg ggcgtggtga agaaggaggc cggcgccgtg ggcgatgcct cgctgctgca
    16741 ggtctgggtg ccctacacca ccgccatggc acgcatgctg gggcagagcc atgtgtccag
    16801 cattaccgtg cgcgtgtccg acaccgtcgg catgcaggcg gcggagtcct ccatcggccg
    16861 gctgctggaa cgccggcatg ggcggcgcga cttctacatg agcaacaacg cgcagatccg
    16921 cacgtcgatc gagcagacca cccgcatcct cacgctgatg atcagctcca ttgccgccat
    16981 cgcgttggtg gtgggcggca tcggggtgat gaacatcatg ctggtgtcgg tgaccgaacg
    17041 cacccgcgag atcggcgtgc gcatggcggt gggcgcgcgc cgcagcgaca tcctgcagca
    17101 gttcctgatc gaatcggtac tggtctgcct gctcggtggc gtgctgggta tcagcgtggc
    17161 gctggcgctg ggggctgtgc tggcactggc tgatatcggc ttctcgctgg tgttctcgag
    17221 cacctcgatc ctggccgcgt ttgcctgcag cagcctgatc ggcattggtt tcggcttcct
    17281 gccggcacgc cgtgcagcgc agctggaccc ggtggaggcg ctggtgcgct gaacaacgcg
    17341 cattccacaa gaacgactac aggttcgcgc aatgtccgcg cgctgtactg gcaccaccga
    17401 cacagccgca caggagcgga acgatgtttc agaagacagg acgtacggcg ttgctgctgg
    17461 gggccgcact gcaactgctg gtgctgattc catacgtggg cgacgcccat gcacaggacc
    17521 gcgatggcta ccgctccggc tgggaccggg gctatcacga ccgccagcgc gacgaatggg
    17581 agcgccgcga gcgcgaacgg gagcgcgaac ggcgcgatga cgacaaggcc aagcgcgtgg
    17641 tggtgggcgt tgtgggtgcg gcggtagttg ccggcgtaat cgctgcggca gccaagcgcg
    17701 agcgcgagac ccgcgaacgt gccgactact gcatgaaccg ctacggcaac tacgaccgcc
    17761 gcaacgacac ctaccgtggc tcggatggct acacctatcc ctgccgctga cctgccctgc
    17821 attccgaagg aaccgaccgc atgaacaaga cgttactcat catcaccctg tgtgccgcac
    17881 cgctgatcgg ccacgccgcc agcggcgacc cgaagcaggc ctatatcgat tccagcttcg
    17941 ccgtcatgga cagcaacggc gatggccgca tcgacaaggc cgagtacgcg aagtaccagc
    18001 aggcacgctt cagcaagcag gccgactcca tcgacgccgc gttcaaggaa atggatgccg
    18061 acaaagacgg aaagatcagc aggaaggaag ccgccgtggt gccggaaatc gagaagtatt
    18121 tcgcggggct ggatactgat ggcgatggct atctgtcgct gaaggaaatg cagcaggcca
    18181 tggtggccgc gcagacggca gacgccccgg cgaagtagcg ccttggtacc ggcgtgtacc
    18241 cgcagcatgg cgatgcactg gtagatgccc accttggtgg gcacagcgct gccgatgggc
    18301 atgcaaacat cagagcgccc accaaggtgg gcatctaccg cagcggtgca acgacgcacc
    18361 gcccaggtgg acatccaccc gggccgcgcg gcagtcagcg caccttgtac agcaccgccg
    18421 cacccggccg cggctcgaac gccggcaccg tctgctgggt gagcgcggtg cccttggcat
    18481 cccacaccag cgtctccacc gggtactcat ccttgcgggt catctggtcg atcttggcca
    18541 cgaccaccgt tgcagcggcc ggcacttccg gattccagcc gaacacaccc acacggccgt
    18601 agaacaccgc gggcgcggcg gcatccagcc ggcggtccgg gcacatcacc agcccacggt
    18661 cgagcatgac gcgcagcgca ccgaccggca ccttcttcac tgtcggcgtg gtgcgctcgc
    18721 tgctgtggcc ggggcagaca ttggccgcgc gggtgaccat gtcttcggct acctggcggt
    18781 cggattgggc aaaggccgcg gccggaatca ggcagaggcc gagcagtaca cgcgtggacg
    18841 tccgggtcat tgcaggttcc tgtgatggat gccaagcgaa cttagcaacg cctgccctcc
    18901 gagttgcaaa gaccgcgtga ggctgcagca caaccccacg cagcctgcgc catcacggaa
    18961 ccaggcagcg ctccacctgc agcgacagca cctggcaggc gttgaacagg ccttcgacca
    19021 gcgctgcgga cgggcaacag gcgggatcat cactctcccg tgccacatgc gcggcgtgca
    19081 gcatggcggt cagcgcggtg attcccgagg cactgcgggt ggccagggcc agatcgaagg
    19141 cgcggccggg gctcagccgg gtttcggtcc aaggctggcc atcggctcgc agattctcac
    19201 cgtggccttt caagtgcgcg aagaacgccg acggcgcgac ggactccgcg gattcgcaga
    19261 gcgccgcttc aagcgtttcg gccagggcgg cgggaagatc acacgcggcg gcgccgagca
    19321 gctggcgcag gcggggaatg tcgggagtac ggtcaggcat ggcgacaacc tcacggtgtg
    19381 gccacctgca gatgcgaggt ggcggacggt gcgggttggc gtgccggata cgtagtacga
    19441 aagccggcgg gtcctaaaac ccccacgcac cgtccgccat gaactggcag agggtgcatt
    19501 gtcgtgaccg caacattaga tgcaagcacg acgccgtgta ctacgtaagt tcgggacgcc
    19561 aatcccggcc agggcgagtg ccttggcgcg gcgatgattg gcgtactcgt tcgtggatga
    19621 aaagtaggga aatgccgcgt cgacgtgcag tcgcggtact tgcgtcatgt aatggcgagt
    19681 tgcccatcaa acgcaccagt tggggcggca atgttcgcct gcagatggca tggcgctgtg
    19741 catgcaggca agccgaacgc gacacagctg attcaccttc ccccataagc cgctcatatc
    19801 ggaacagatc aggtgtcgcg ttcgaccctt gaacactctg ctgatccgac atcagagatc
    19861 gaacccgcac ttcccatgaa cccgcagtcg cccattgcag ttgggcttcg gcgtgcttgt
    19921 cgcaaaagcc actcgaagca acgccgaact gcatcggatt ctgccggccg atcagcaatg
    19981 gaagcgattc atggcacgga actggattgt gatgggagac ccgacctcca gcggagggcg
    20041 tgtaatcact gcgtcgaacc gaaccgacat cgagggcatg ggcgttgcac gcatgggcga
    20101 caaggcgacg tgcccgcata tgcacaaagg ggtgtttgcg attgtcgaag gtgacagcac
    20161 gatcatcctc gatggccagc ctgttgcgct ggacggatgc gcgctcgcgt gtggctgcag
    20221 ggtgatatca agccaacagc tcagggtgta cgtatccaat actgccacca caggcgggac
    20281 tgccagtccc aacatggccg gtacgcagcg tgctgaaacg ccgctggcca gcggccgccg
    20341 ccttcagttc gaccaggcta tccgtttcac cggctcacag ggcatgccgt tgcgggaact
    20401 tccctacacg ctccatctgg cgaacggcca gaccttctcc ggcatgacca acgcactggg
    20461 cgagacgtca cgtgtttcaa cccgcgagag cgtggcggtg gtgcgcgcgg agttgcgccc
    20521 acccagcgcc acgagcggtt gttgcgaacg caccttgttg gccgggatcg atgatgcagc
    20581 ggtttttgat gtcgatggtg tgattaccac ctctgacacc atgggaacgt cgatcgtacc
    20641 ggtgcaggta ccaagccatg aacgcggctt gacacaaggc gagatcgaga tggcacagct
    20701 ggtgttcggc gatgcgattg actacagcct ggtgaggatt cacaaccatg gctactggat
    20761 gttgtttggg atgcaacctg aggacacggt ggttgcgcca aatggcgaaa tctacttccc
    20821 gaaagacctg tacattcatg attactcttc tggcgatctt cgcaaccagc agcttttcat
    20881 ccacgaaatg acccatgtct ggcagcatca gctcggctac aacgtgaggc tggtgcgtgg
    20941 accgcgaccg aacatgagct acgactatgt cctcgatgac gtgcgcctgc tccacgacta
    21001 caacatggag gcgcaaggcg acatcctcgc tgactacttt ctcgttgcct tccgtgattc
    21061 acaaagcaag atgagcaaca caaggtatcg aaccacattc ggcatccatg cccagttgaa
    21121 acgcgtcctc tcactattcc tcgcgtcaac ttccgacaag cgcaacctcc cgaggaccac
    21181 acgatgatca gacaagcatg gttccttctg gcaatcctga tacctctcgt ggccagctgc
    21241 tcagcgccgc cagggcgcta ccagaaggcc acgatcagca cctctgacgg caggctttgc
    21301 tttggtgttc ctgacacgcg cgggaatcga tccgagccgc ctgatatcga ctccatcgca
    21361 gtgagcgctg ctgggcaagg actctaccca acgtgggaac gggtcttcat ggacgagcac
    21421 attcccgaac cttcgctccc acctgaccag tgcataccct atggatccgg tcccacccct
    21481 gcaccgccgc tgcaggtggg cgcgtactac caggtggtgc tctctgggta tacgccagat
    21541 agcctggacg atggaacttc gggaaagttg cgtgtattca gagcctgctt tcacctgcgt
    21601 caatccgccg atggccgcga gttgaagcct gtcgtggtga cctgcgggga tgtgccccaa
    21661 tcttcgctgc ctccctcatg agcggaggac taatggttcg cgtggcgcag agcgcgatca
    21721 catgaaccgc tgcggcagga ggctcaccgc acttccggca tcaccggctc ccagccttca
    21781 actgtccccg cgcgtactct ggtacccacg ataggtttcg ccccactcgc gcatcgccag
    21841 cagcaccggc accagcgtgc gcccgaattc ggaaagttcg tattccacct tgggcggcac
    21901 ttcggcatag acgtggcgga tcaccacccc atcggcctcc agttcgcgca actggctggt
    21961 cagcatggat tgcgtggcgt tgggtacccg ccgcgtcaat tccatgaaac gccgcttgcc
    22021 agtcatcaag tggaaaagaa tgatcggctt ccacacgccg cccatcaccg acagcgtgac
    22081 ttccacggcg cacccgctct tgccatccca acgcctgcta cgcatgcata ctccggaaaa
    22141 ccatagtacc tacgaaaaac catcgttctt gttgcaataa cggtgcgagc ctagcatgga
    22201 gccatcccct gaacgcgagg ccccaccatg aatttcaagg cgctgctgac ccgcaagacc
    22261 gacgacggag tttccaccga acttgtcgat ttcgatgaag ccaacctgat ggatggcgac
    22321 gtcctggtgc aggttgaata ttcgacgctc aattacaagg acgcgctggc gctgacccat
    22381 tcgcgcccgg tcatgcgcac gtatccgctc attcccggca tcgacttggc gggcgtggtg
    22441 ctggaatcca gcaatgccgg tttcaaaacc ggtgatcgcg tggtgctcaa tggctgggac
    22501 ctgagcatgg gccaccacgg tggcctggcc cagcgcgcct gcgtgcgggg tgagtggctg
    22561 aacaagattc ccggcaacct gaccacccgc gatgccatgg ccatcggcac cgccggctat
    22621 accgccatgc tgtgcgtgct ggcactggaa gacgcggacg tgaccccgga gaagggcgac
    22681 gtgctggtaa ccggcgccaa tggcggcgtg ggctcgattg ccgtggccat tctttccaag
    22741 ctgggctacc gcgtagtggc cgccaccggg cgcccggaac acgccgagta tctgcacagc
    22801 ctcggtgcag cggagatcat cgaccgcgcg cagttctccg agccgcgtga caggccggtc
    22861 agcaacgaac gctgggccgg cgtggtggac gtggccggtg gaccgacgct ggtcaacgcg
    22921 attgcagaga ccaagtaccg tggcgccgtg gcagcgtgtg gcctcgcaca gagtgatgcg
    22981 ctgcacggat cggtcattcc cttcattctg cgcaacgtga ccctggccgg cgtggattcg
    23041 gtgaatgccc cgcaggacgt gcgccagcgt gcatgggatc gcctggccac cgatctggac
    23101 ccgcagaagc tggaaagcac cgtgcagcag atcgggcttg ccgaggtgct ggaggtctac
    23161 gagaagatca ttccgggcaa ggtgcgcggg cggattgtcg ttgatgtgaa cgcgtgacac
    23221 gccatcagcc agcgcgacag atgcacgagc gccacatgcg gcaccaaggc cccttatcat
    23281 tgggttgtaa gggcgctata cgcccggtga agcatgcaag gcagtatctg gatgtctatg
    23341 gaatggcgcc cctcgggctg gggccagcgt gtgacccgct cgccaccgtg gcggctgcgg
    23401 cttgatggcg aacacctcga gctgaccctt gggggcgagc aataccgaca gcacgtggat
    23461 ggcgatcatc gcgtgcaggt tgtcccaggg ctgttctggg cccgggttgc tctgcagact
    23521 gaaggtggga ctgtgtccgt gggcgggctg cccaatcggc aagcgtccca actcgccgcg
    23581 gcggtgcagg acgtgttgtc cgcgcgcagc acacgcgggc gcaaaggcct gttcgaggac
    23641 gtgctggcgc agatccaggc ctggctgagt gcagcggacg cactgaccga tcgcggtcac
    23701 gccagccggc gttggatcac ccacgaacaa caacaagcgc tgctggccga ccgccccgcc
    23761 ctgccactct ccccggatga gctggagcgc ctgttcctcg atgccagcgt gcatgacgac
    23821 ctgcgctcca gccaccatct ggccgcgctg gaagcgctga acgactggca tctggattgg
    23881 cctgccgtat gggccgaagc gaacgacgcc atggccatgc gtgagctggt cctggccaag
    23941 gacttcctgg accgggtcga gagcagaccg ctgaccgagg aacaggcccg cgcggtcatc
    24001 tgcttcgaca accgcgtgca ggtcgtggcc gcggccggct ctggcaagac ctccacgatg
    24061 gtcgccaagg ccgcttatgc catcgatcgc ggctttgtcg aacccgagcg catcgtcatg
    24121 ctcgccttca acaaagatgc ggccaaggaa ctggaagagc gcgcgcagcg ctcctttgat
    24181 cgactcggca tgggtgacac cgtggtcgaa gcgcggacct tccatgcgtt gggcctggcc
    24241 atcatcggca aggccaccgg gcgcaagccc gacattcccg aatgggccat cgatgccacg
    24301 cagggcttca ataagctggc cgagctggtg gatgacctga aggatcgctc gatccacttc
    24361 cgcacccagt gggacatgtt ccggctggtg ttcggccgcg accttccacc gttcggcgcc
    24421 gagatgatgg ccgatggcta cgaccgcgac ggcacgccct acatccgcac cctgcagggc
    24481 gagcgagtaa agagcctgga agagtgcgtc attgccgatt ggctgttcta caacggcgtt
    24541 gcgtacgact acgagcgccg ttacgaattt gataccgcca ccgataccca tcgccagtat
    24601 cgaccggact tctattaccc ggacgccgcg ctgtatcacg agcactttgc gctcgatgcc
    24661 aatggccagc cgccaaagca tttcgcccac tatgcggaga gcatgcactg gaagcggcaa
    24721 cagcatgtgg cgcgtggcac tgcgcttgtc gagaccacct cgtttggcct gcgcagcggg
    24781 cacgctctgc atgacctggc ggagacgctt ggcgcatctg atatcgagct cgatccgaac
    24841 ccggaccgcg agctgcccga tgcgggtgcc aagccgatgc cggatgcgga cctgatcggc
    24901 ttgatgcgca ccttcattgc ccatgccaag agcaactgcc tgacgctgga cgatatggct
    24961 gcgcgcttgc ggcagttgcc cgaagatcaa ttcaaggaac ggtaccgccg cttcctggaa
    25021 atcgccggtc ccgtgttcca ggcctgggac aacgcgctgg ccgacgagcg cggcatcgat
    25081 ttcgaagaca tgctcaacat ggccgccggg ctgctggagc agggacatta tgcgtcgccc
    25141 tacgacctgg tgttggccga cgaattccag gacgcctcgc gcgcccgcgc ccgtctctgc
    25201 cgtgcactgg tgagccagcc cggccgccac ctgtttgcgg tgggcgatga ctggcagtcg
    25261 atcaatcgtt ttgccggcgc cgacgtttcg gtaatgaccg gattccgcga atggatggga
    25321 catggccagg tgctgaaact ggagcagacc ttccgctgtc cgcaggcgct gtgcgatgtg
    25381 tccagccgct ttatcagtcg caatcccggg cagatcgcca aggcggttcg ttctgctacg
    25441 ccagcgatgg gccctgtgct gcaggcgttc cagatgaacc ggcgtgagga ggtgcaggac
    25501 ggtgtgcgcc agtacctcac caggctgcat cagcaactgt tgtccggtgc ggtgccgcag
    25561 ggtcgcaacg gacgcgtgac ggtcttcatc ctcgggcgct atcaggccga tcgcagtgcg
    25621 gtgcctgcgg agtggagaac gtcgtttggc agcacgatgg acgtcgagtt cctgaccgcg
    25681 catcgctcga aggggcgcga ggcggactac gtgatcctgc cgggcatggt gaaccgtggg
    25741 ttccccagcc tgcgctcgga tgacccggtg ctgtcgctga cgatgccgga gggcgatacc
    25801 tacccgctga gcgaagaacg gcggctgttc tatgtggcac tgacgcgtgc gcgacgttcg
    25861 gtagtgatgt tcaccctgca gggcaagcac tcaccgttcc tggatgagct ggtgaatgac
    25921 ggtgcagtga aagtgaccgg gatttcaggc gctgccatca atgaggaacg atgcccagtg
    25981 tgcaaggtgg gcgtgtttgt ggagcggaat gggccgcatg gggcgttccg gtcgtgctcg
    26041 agttacccgt tatgccataa caagccaggg cgatatcgca gcaactgagg gccatccagc
    26101 acacactagc caccaacgca ggcgccgcgt atcagcaagg tgcactggag gcggtgggca
    26161 aggctcagca ggtcacgatc acggtggttg ccgtgcatcg ggccgccccc gcgaattcaa
    26221 ttgctaaagg acatatcatt ctgtcaatcc acacgggatc taaacgatgg ttgattggac
    26281 tgggagcaac gctgctgctt gggcacaagc gatattatct ggtctcgcga tcctttactc
    26341 gggtcgtctt gcgtatgggc aatcgcgatc tgcaaagcgg gagaaaattg acacctacgt
    26401 tgcgcttctc tatgaagccg atgaggctgc cgaatgcgcc gtagaagtac tgagagatgc
    26461 tgccaatgag agcgtggaag tcgtagcccc gccaatggat ttcgccggat tggagcgatc
    26521 ctttcgtgag gtcccattca acgaagttcc agatcatcga ctggtacgag ttctcagaag
    26581 tgcagccttc agctgctttc agctttctct tcgatacgac aaagtcgttg acggcacgac
    26641 gcgcgtttgc acattccact ttgaacttgc ggaaagcgag gcaaaaacta tccgagcact
    26701 tcgattggag gccgaagcaa tcagcaatag ctacatgacg ttgcccgcgc gagccatgta
    26761 tttcgcttgg agaatgaaga tctccgccat cggcgctctt aggcctcata agattgaatc
    26821 tccgagagat cgcgagagct gaatccaagc tccagcaggc tggcgccctg cgcttggccg
    26881 cgttcttgga aaagtactat ctgactggag ctaacatgct tggcctgcac gattcagtgg
    26941 atatcactac caccgagtag tcgggcctca gcgcgtttct gatacgcgtt tccgggcggg
    27001 gtaccttgcg ggtagcaaag gctccatgga ccaccggcaa gtgagcacaa acgcacccga
    27061 aacattgctg ggcaatgcct gtcccttcga ccagctaggc gacacgctgt tggtgcaaga
    27121 aagcttcatc gacctgcatg ggacgggaat ctagcaccga cccaaccccc ttagacccga
    27181 tccagcgcta tgcgtacgca gcagacgctt tgccgggctc gaatggtgac agggccagaa
    27241 gggaacttaa acaatcacct cagcgctgta agtgcacgaa gtgagccggg agcaaaccga
    27301 gttctctacg ggctatccgc agcggctttc tccacgccaa tgctggggta gatctcgctc
    27361 tcagcagcaa ctattaccgc gcccaggtcg ttgtccagcg ccttcgctgt ctctctgagg
    27421 ctgtgcagct gaattttcag ctgccccgtg tctttcatat gaacggttgc atcaatcgtg
    27481 agcttgagga aacgcacggt gttcaagcag cgagccaatt tgtacccgat ttcagggtcg
    27541 agcagatgga ggcgagaaat tcgctcctca gtcagcggaa aactgaggga ctgtatcgcc
    27601 ataagagctt tccttcgttg cgcttcgccc caagaaatga aagaagcatc ccatttcaag
    27661 gcgtggttgc gccaagcgac gatgctggag tgaacgtcaa gaaactccgg atgaaggtaa
    27721 ataagaagga attttccctc gcgctccctg tcttccctag caatctcgtg cggggctgct
    27781 gcgatcttgt ttgccttcct tccgagttgg aacacggcaa aggcggagag cgctgctaca
    27841 accacgcccg ccacagcgat cagtgcagcg agaccggcta ccagcacacc aaacaccgca
    27901 gacaaagagg cgattgcgtc ccaccagacg acacagtcgt cgacgccaag ccgatcgcac
    27961 ctaaacattc cactccaaaa actcatttac tgatccccta tggactggcc ggcattctgc
    28021 catgccaatt cgggcgaatg agatcgccaa tggctgacaa cctcaaccag gccaagcaca
    28081 ccgcgcgcgt gtgcctctcg ggatgccgcg cacgccggca cgggcacagt ttctggttcg
    28141 ccttcaacgc tgcgcagagc gcgcgcatgc gcgcctctgc acctgcaact ctgccggcgc
    28201 cgccgactca gccggacctg ttcgcatgac caacattcag cacctggtga aagtctctcg
    28261 cggcaaggac agcactgcgg tgcacctgcg cgccgtcgag cgagatcaag gctggtcgat
    28321 tcctcgctcc atccgcatcg gacgccgcgc actgtggata caatccgagc tgcagggttg
    28381 ggttcggcag ctgatcgccc agaatcgacc gctgcaagtg gatgggtagc tgggcaggta
    28441 gaagatcctg agacaacaaa aaagccccta tttctagggg ctttttagaa attctggcgg
    28501 agagagtggg attcgaaccc acggaaggtt taacccttcg ccggttttca agaccggtgc
    28561 cttaaaccgc tcggccatct ctccgtatcg gcccagcctg ctggccgggc gcgtattctc
    28621 gcacggccgg gcgatttgcc caagaccggc gtggcgctgg gcatcaccca gcgctcccac
    28681 agcaggcctc agcccgcgtc caccgccaac gcgcccagtg cactggcctt gatccgctcc
    28741 ttggcctttt cacaggcacc accgcagtcc aggcgcgagg cctccagctg cggcggcaga
    28801 tgctcggcca ggaagtcgat gaacacccgc accgccggca gcaggccgcg gcgcgaggcg
    28861 aacacggcgt ggcacacgcc ctgcggcagc gaccagtccg gtagcaccac ttccagctcg
    28921 ccattgcgca ccgcatcggc gcacacggtt tccggcagca tggtgatgcc gaagccgtcc
    28981 ttcaccatgc tctgcagcag cgggaagtcg aagccggcca cgcgcggctg caggtcgacc
    29041 cggcgcactt cgccttccgg gccatgcagc tcccagcgct ggcgcgcttc gtcttcgctg
    29101 atgctgaggg tgacgtgctg ggtcagctct tccgggtcct tcgggcggcc ggcgcggtcc
    29161 aggtacttcg ggctggccac cagcagttcc tgcacctggc cgaagctgcg catcaccagg
    29221 ctgccgtcgt cgtccagccg cgaacgcacg cgcagcgcga cgtcgtagcc ttcattgatg
    29281 atgtccacgc ggcggttgct gatgttcagc tgcaggcgca ccttcgggta ctgctcaagg
    29341 aacttgggca gcagcttggg cagctgcatc tgcgccagcg acaccggcac gctggcgcgc
    29401 accacgccgc gcggttccgc gctgaggcgg tccaccactt cgcgcgcggc ctgcgcctcg
    29461 gccagcatgg tctgcgcgtg gcggtgcacg ctggtaccaa cgtcggtgac cgcaaagcgg
    29521 cgcgtggagc gctgcagcag gcgcacgccc aggtcggttt ccagctggct gatgcggcgg
    29581 ctcaggcgcg acttggggat gcccagtgcg cgctcggcgg cggcgaatcc gccgtggtcg
    29641 accaccatcg cgaagtagta cagatcattc aggtcatgca tgcccgagtt ccatatctag
    29701 aacaatacgt ggcattcaat cacctttatc ccgcctttgc aacaacctat cgttctctcc
    29761 gtcggcgggg ccaccccgcc ccttcctccc agaacatagg tgactgccat gaagcttctg
    29821 catctcgacg ccagcgtgct tggcgacaac tccgtgtccc gccagctgtc ggccgccgtg
    29881 gtcgcccgct tcaccggcca gatcgatggc ctgcaggtcg attatcgcga tcttgacgcc
    29941 aatccggtac cgcatctgcg cagcagttcg ctggccaaga ccgatgccgc cgaggcgacc
    30001 gatgctgaac aggtgatgca gcagttcctg gacgccgaca tcgtggtgat cggcgcgccg
    30061 atgtacaact tcagcattcc gtccaccctg aaggcctgga tcgaccgcgt cgccgtggcc
    30121 ggccgcacct tcaagtacac cgagaacggc ccggtcggcc tggccggtgg caagcgggtg
    30181 atcatcgcca gcagccgcgg cggcatctac accgactcgc cggccgactt ccaggagccg
    30241 ttcctgcgcc aggtgttcgc cttcatgggc atcaacgagg tcgagttcgt gcgtgccgaa
    30301 ggcatcgcct actcgccgca gcatcgtgag gacgccattg ccggcgcgct ggccaccctg
    30361 ccgtcgcacg aagtggccga agccgtcgcg gcttaacgcg ttccagcgtt cggc
//
LOCUS       DAOKIP010000030        28987 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.030,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000030 DAOKIP010000000
VERSION     DAOKIP010000030.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 28987)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 28987)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..28987
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.030"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            12..392
                     /locus_tag="QEL58_001180"
     CDS             12..392
                     /locus_tag="QEL58_001180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012512454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbjQ family protein"
                     /protein_id="HDS1675676.1"
                     /translation="MADPYNSGIPSPPALRFDDSLVTTAFELPGHRVARNLGVVRGIT
                     VRSRSIVGNFLGGIQTLFGGNITIYTELCEQAREETYRDMVKHARQLGANAIIGMRYD
                     ATDVMTGLTEVLCYGTAVVVEPLR"
     gene            complement(417..3143)
                     /locus_tag="QEL58_001181"
     CDS             complement(417..3143)
                     /locus_tag="QEL58_001181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional acetate--CoA ligase family
                     protein/GNAT family N-acetyltransferase"
                     /protein_id="HDS1675677.1"
                     /translation="MSTYHLQSVFRPQSVAVIGGSPRERSAGRAVMRNLRGTGFPGKV
                     AWINPRHAEIDGIRTVKRLKDLDWVPDLVVITAPATIVPQVVRTAAERGVQAAIILTA
                     HLGEGPGSLSAQVEAVARTHGLRILGPHCLGVIAPHARLNASIAAHFPQAGDLALISE
                     SSAIAAALVEWGVARSVGFSAVVSLGDTMDVDFGDLLDYFATDYRTRAILLYVEQIKD
                     ARKFMSAARAAARAKPVVVVKSGRAERVQPGSRDTHVQALARADDVYGAAFNRAGLLR
                     VGALDELFTAAESLGRLGTFPGRRLAILSNGGGVGRLAVDQLIALRGTLANLSDSTIE
                     KLDAVLPQGWSRSNPVDIVVDADGDRYASAIEALLADNENDAVMVVNVPTAFTSSADA
                     AQALTRTLGLRPRHHRDKPVFAVWLGNDDQATATLNAARVPTYPTEAEAVRGFQHLVR
                     YREAQNALMETPPSLPQDFNVDAAAARALVDAALANGQQWLDPLATHELLKAYGIPSA
                     PVMHARDAHEAMDLAQPLLERGASVALKILSPDIPHKSEVDGVRLNLGTLPAVQSAAN
                     AILSRARQLRPDARIDGLLVQPTIVRPKARELIVGIADDATFGPVIVVGRGGTAVEVI
                     NDKALALPPLDLRLAHELIGQTRASRILKAYGDVPAADERALALALVKLAQLAADIPE
                     VRTLDINPLLVDGKGILALDARVAIAPSRILHKGRGHPRFSVFPYPKEWERTIELSDG
                     GRAFVRPVRPEDDALFRAFFARVSDEDLRLRFFQSVKHFSHEFIARLTQLDYARSIAL
                     VAIEPRSGEMLGAVRLHADADYHRGEYGILIRSDLKGHGIGWRLMAIMIEYAKWLGLD
                     VVEGQVLRENSTMLAMCQSLGFKTKLDPDDPTVMMVTLPVQQVEVPEVPPVA"
     gene            complement(3276..4646)
                     /gene="mgtE"
                     /locus_tag="QEL58_001182"
     CDS             complement(3276..4646)
                     /gene="mgtE"
                     /locus_tag="QEL58_001182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014648829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium transporter"
                     /protein_id="HDS1675678.1"
                     /translation="MNQKQLLRAGADAAALAAPLANYNTADAVEFLNTLELTRAADTL
                     AALPLPRAVKMLEAPELHRSGELVAALPPARAAALLGLMADDRATDIVHELDEDERAR
                     LIPLLGTDARQAIQKLLSYPPNTAGALMTTEYVAVPASWTVAQTLQHIRQVERTRETV
                     YAIYVLDPASQHLQQVVTMRRLITGLPEESILDVAQVNPPVTVDALMDQEEVARLIRR
                     HDLLAIPVVDAQQQMLGIVTVDDVLDALIEESTEDAHKFGGMEALDKPYMQIGFLEML
                     RKRAGWLSVLFLGEMLTASAMQHYEDELARAVVLTLFIPLIMSSGGNSGSQATSLLIR
                     SLALRELRLRDWWKVALREIPTGMVLGAILGCLAIVRIVIWQLGGLHDYGEHWILLAI
                     TIGAALVGIVTFGSLSGSMLPFILKRLGFDPASASAPFVATLVDVTGLVIYFSIAAMI
                     LHGTLL"
     gene            4990..6768
                     /locus_tag="QEL58_001183"
     CDS             4990..6768
                     /locus_tag="QEL58_001183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HDS1675679.1"
                     /translation="MHSGGLELALVLLLAAVIAVPVFKKFGFGAVLGYLAAGVVLGPD
                     GLGFVQDADRILGAAEIGVVMLLFVIGLELSPARLKVMRRSVFGAGAAQVALSGLVLG
                     GLLLLDHFQWKSALVVGVALALSSTAVGLQLLSEHKAINSDHGRLGFAILLFQDLIAI
                     PLLAAIPLLGGVKNETLRWEDAAVALGALAVVILCGRPVLRRVFSIIARTRSPEVFTA
                     TALLVVLGTAWFMQEAGLSPSLGAFLAGVLLSDSEFRHELEAQIEPFKGLLLGLFFIA
                     VGMGIDLDRIASEPWLIAAGVGILLVVKFGLLYVIGRIARLSSRQSLLLGSVLWLGGE
                     FAFVVFNEAQRAHLLGNANHDRLVAIVGLSMAITPLLMIALLKLLGQEKAAPRQAAEA
                     DKVAPDNRPKVLIAGMGRFGQVIARLLTAQKVPFVALEANPDTVADLRRFGNQLYYGD
                     PTRPEMLRAAGGEHIDVFVITVDDPETNLRAVRMVRRLYPDATVLARARNRQHAWRLM
                     DMSAEPFREVFGTSLEMSGRVLTALGIAANVAERHVQRFREHDEQLLRDQYLVYDDEA
                     AVIQTSRDARNDLMHLFEADAESDDT"
     gene            complement(6833..10171)
                     /locus_tag="QEL58_001184"
     CDS             complement(6833..10171)
                     /locus_tag="QEL58_001184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005420279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ankyrin repeat domain-containing protein"
                     /protein_id="HDS1675680.1"
                     /translation="MTDPSRPRALSIAFTVGAVLALGAAVGGVPGALLAALAQPAFAL
                     GVSWWRRSRALLPLKVVARQDLPALLALWAAAPVLLALLLAWPLAALRDSGSLAAVLG
                     LSVLVSAGLLAAWRTWPLWNDVERLDGSLAQHWQALAGRDLTAWRGLGVAALVIALAA
                     LVVLPAWPDLLPESARWPTALAVVVLSPLLHLLLQRVAPAPLVSLRTGALNATSHEHE
                     PMFAAAAETAPLEAMAPQELTPTLYEAARHGRIDRGLQLLQAGADPYALPDPNWRDQR
                     SLAVLAAVLPDLRLLRELIARGVDVNAPHRGMTPLLAATRDSWHGRPEAVMTLLANGA
                     DSRATDGDGNTPLHHAARSSDPGVAALLRDAAAEVDALNNDGWSPLAVACQVGNWRLA
                     RFLLERGARSEPAEGTPVLLAAAATEDDDPAGVQLLLKHKARADARDRQRRSALHEAA
                     LAGHVEIIGVLLGAGANLEARDALGRTPWLEAARAGRAAVVEHLLPHKPDLVAVDGEG
                     RNAVQLAVMAEDVSPLLIKRLVELGIAADAADPVGRRAVDYAAEAGRWAIVALLDPSY
                     PLPAAVSDGLAERGEAAMASGLLPDRPPLTLLREALGFGNTEGMAALARLCQPEELGG
                     LLLDPELALEPRAVDWLLGHGADPYVRDACADTPMFALLSRGIDAVPALQVMLQRGLS
                     PAGRGGLARFLAACAQHDQAARGLEQLALELLERGADPFAASPAGDPPLSLAVRLGWL
                     RLQQALLKAGVDREARDSHGMTALHLATALAREGALKLLVQHGASPEARAADGQTPLG
                     VALSIGRRDLADWLDWRVWPLPRRTLREADLPAAAMAGDVDAVRRLIDLGFAVDAVDA
                     QGCTALLRAAGGGHLAVTDLLLARGADPQHAAASGATPLSAAVSMRQVDIVSALLDAG
                     AKLEHRLPGGVTVLMLASALGLPDIVARLLTAGADVHAGDAQQLGPLHCAALYGFSAR
                     DRSRLLALLDTLLLAGAEPDQAAAGSVTPLLLLLGARAEPGTACDEQVVMAAVERLLD
                     EDVSLDVRDPRGFGPLHLAALHGLPLLVQRLLRAGADPEVRDSLNRSPREIAVMRGFI
                     DVAGEFEPRVPGVSSMARFLRDNG"
     gene            complement(10164..10424)
                     /locus_tag="QEL58_001185"
     CDS             complement(10164..10424)
                     /locus_tag="QEL58_001185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006476245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcgL domain-containing protein"
                     /protein_id="HDS1675681.1"
                     /translation="MHAYVYKSQLKPDTYVYVPRREDFSALPAPLLKSLGTLTFVLDV
                     ALDAQRRLAQADPDKVRSEMSERGFYLQVPPSVASLMPRHYD"
     gene            complement(10575..11588)
                     /gene="cydB"
                     /locus_tag="QEL58_001186"
     CDS             complement(10575..11588)
                     /gene="cydB"
                     /locus_tag="QEL58_001186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011051953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome d ubiquinol oxidase subunit II"
                     /protein_id="HDS1675682.1"
                     /translation="MDLMTWLPVAWFAVIGFGVLMYVVLDGFVLGIGILAPFAEDEEQ
                     LDLMMNTAAPIWDGNETWLVLGGAGLLAAFPKAYAVLLSALYLPVLLLVVALVFRGVA
                     FEFRFKAHRSRRLWSVAFALGSLLATFAQGVILGTLVQGLPLQDGVYHGGPFAWFSPF
                     AMLTGAALVAGYALLGSTWLILKTEGRVQALARQMTRPLVVAVIAAMGLVSSWLPFLQ
                     SRLMDRWFSDGNFWWLSPVPLLTLAVAAALWRSATHPRRDLPPFLLSLALFVLGFLGL
                     VLGMWPYLLPPSMTLWQAAAPASSLGFTLVGLVILLPVILGYTAWSYRVFRGKVHADA
                     GYH"
     gene            complement(11590..12987)
                     /locus_tag="QEL58_001187"
     CDS             complement(11590..12987)
                     /locus_tag="QEL58_001187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006402337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome ubiquinol oxidase subunit I"
                     /protein_id="HDS1675683.1"
                     /translation="MDALLLSRIQFGFVISFHVLFPAFTIGTASWLAFIEWRWLRTKL
                     PVWRELYFFWQKIFAVSFGMGVVSGIVMAFQFGTNWPRLSEVAGTVIGPLLTYEVLTA
                     FFLEASFLGVMMFGWGRVSPRLHFLSTCMVALGTLFSTFWILSSNSWLHTPAGYEMVN
                     GIVHPVDWWQVVFNPSFPYRLAHMALGSFITTCFVIGGVGAWYLRKGTHVEAGRRMLV
                     AAVAFAALTVPVQIFVGDMHGLNTLKHQPMKIAAMEAHWHETKEGEGVPLVVFALPNE
                     KEERNDFEVAIPKLGSVILTHSLDGSFDPLTSVPASERPPVTPVFFAFRIMVGLGTLM
                     LLLAWVSAFQLWRRKLLDSPWLLRGWNWMLPSGFIALLSGWFVTEMGRQPWVVYGVLR
                     TADAVGPQSAWMTALSLGVYVVGYAFVFGWGIWYLVKILRHGPQPYAEGPSLDHGSHT
                     PARPLSAADEPLEDR"
     gene            complement(13187..13402)
                     /locus_tag="QEL58_001188"
     CDS             complement(13187..13402)
                     /locus_tag="QEL58_001188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010482334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675684.1"
                     /translation="MSQSTDPRDAGERALAQALREQAQQEQTPDVSEALQKRITAESR
                     DSGVLYVVVQVLLFGALLAAAAWYFWH"
     gene            complement(13399..14052)
                     /locus_tag="QEL58_001189"
     CDS             complement(13399..14052)
                     /locus_tag="QEL58_001189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014038942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HDS1675685.1"
                     /translation="MSLLGEALSALRGRRHHDAAATTAPAAPLDADQALVRAIIDGSQ
                     AAFSQLVETHQRTCAHVIGRMVGDRDQVADLLQETFLAVFRQLHRFRFESSLRTWVSR
                     VAYTTALQHLRRRRLEAQWMVAVEVPEELGIGDEGPGPAEFSESLQAGRQLGAALERL
                     SAPQRLIVGLHYLEDFDLAEIEQVTGLARGTIKSHLYRARQILKQELTRHATAGELL"
     gene            complement(14090..14419)
                     /locus_tag="QEL58_001190"
     CDS             complement(14090..14419)
                     /locus_tag="QEL58_001190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005411618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675686.1"
                     /translation="MQELIPITLFICIAYAIHAIADARARSKLVAPHVPEEVIRSLAV
                     LEEERRRQGALRWGISLVCLALAMALLEVIGARDLTFGAAAALVGSAGLGQLLAWHFT
                     RPAARKG"
     gene            14587..16956
                     /locus_tag="QEL58_001191"
     CDS             14587..16956
                     /locus_tag="QEL58_001191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005411619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S9 family peptidase"
                     /protein_id="HDS1675687.1"
                     /translation="MSRVLPLSLLLSAVLAAPAAHAAPTPITIEQAMADPDWIGPPVE
                     KAWWSWNSQQVEYQLKRNGSPVRDTFRQPVAGGVAAQVADDQRGTLDVAEPVYDRSRS
                     RSAFVRNGDVFVRDLRSGALTQLTRSNERAGNVNFAADNGVIWRVGQSWFHWTAASGV
                     QQVASLKAEKDPRTPPKADVLRDQQLRTLETLRRDRDQREALKDQDQRWRQADPTRAP
                     GPVYLGADVEIADSVLSPDLGHLIVVTKPKDFDDGRGGKMPLYVTESGYEETEDTRTR
                     VGRNGFEPHTLWYVDVRTGKAEKLSLSGLPGIGTDPLAELRRKAGKDALKGERSLQVM
                     SDFMGGGIRWSADGQQAAVMLRANDNKDRWIISVNAADGRVQNRHRLTDNAWINWGFN
                     DFGWMADGRTLWLLSEESGFSHLYTQAGTAKPQALTSGKWETSAPVPSADGKGFYFLC
                     NQQAPHDYEVCAVDTGSRQVRELTSLNGVEDFSLSPDGQQLLVRYSGAYLPPQLAVLP
                     STGGQARVLTDTRTADYKARQWIQPKLVAVPSKHGAGVVWAKYYEPENKEPGRKYPIV
                     MFVHGAGYLQNVHQRYPAYFREQMFHNLLVQKGYIVLDMDYRGSEGYGRDWRTAIYRN
                     MGHPELEDYKDGLDWLVDTQQGDRDHAGIYGGSYGGFMTFMALFRSPGTFKAGAALRP
                     VVDWHQYNHGYTSNILNTPDIDPEAYRVSSPIEYAQNLQDNLLIAHGMMDDNVFFQDS
                     VNLTQRLIELHKDNWSIAPYPLERHGYVRADSWLDQYKRILKLFEQNLK"
     gene            16953..17372
                     /locus_tag="QEL58_001192"
     CDS             16953..17372
                     /locus_tag="QEL58_001192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005411620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HDS1675688.1"
                     /translation="MSTAAATIEIVAAVILDDRGRALVVRKHGAHRFIQPGGKPKPGE
                     APLQALARELDEELGVQLRADATLALGAFEDWAVNEPGHRVRAQAWWVQVDGTPQARA
                     EIAELAWVPLQPPHGLPLAPLSEHHILPAVATRVTAR"
     gene            17403..17960
                     /locus_tag="QEL58_001193"
     CDS             17403..17960
                     /locus_tag="QEL58_001193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675689.1"
                     /translation="MSVPLPPPSLQPSPYHAWIRPLVQASFWLSALLAGYFVLQGLLV
                     WPLHDVPLWQLLAGEAQHRQMHSLAWLLAHPVGASMIAALLCLVSAVASWGLLRERYW
                     GLWSFVVMLLLSALANFAITWWWDVFMRDMIVLLADGPEMQQSLQPRRWMMTFTLLGT
                     SVLFLGLQGWLAWRLLRPDIRSRFH"
     gene            17996..19117
                     /locus_tag="QEL58_001194"
     CDS             17996..19117
                     /locus_tag="QEL58_001194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675690.1"
                     /translation="MRLLALFPALLLLAALPASADALRCGEYRSLDDGMALVFTSPSN
                     GYRHNGIGEPEPLWVDHSAAQTRLVMLDDGVAEPVRISADGQRIEDSVTVVYTLRQPG
                     ACTAEPSAVAGSCHAAGSYCMVQLPTASPGQARRACDEGVGAGCSTLLRLMREGSAAD
                     AADDAGPAVFERPPPCREHTAGHDRQACEAMTDDALATAMRRVAQRLAQEDEDTLDAP
                     LPAAARDRLQQLCLQYRGGRFCVEVAAQQLIALEPALAVQALQVTCDGGRVSACERTA
                     PLRELGADLRLVALQHVPCGRYQADGGVIDMLDFGDGTQARLHEGAVQLQQNGETLTL
                     RQLGNGDLLGMDVQTAYQRYQPVPGTAQCTPPREGRGSP"
     gene            19155..20771
                     /locus_tag="QEL58_001195"
     CDS             19155..20771
                     /locus_tag="QEL58_001195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014038947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675691.1"
                     /translation="MHSPAPRRRWLAWALLLAAPMAAAQSLQCGLFKADEGSSTLRIS
                     SPNRGEQKHFGSAPSPVAFQQIDGKLQLVNLEYGLPSALQVRDRGRTVEVDGTVYILQ
                     APAQCTAAATPAEGSCLADAAACLDNRREANPAALEAGCREGVPGMCLQLADRWHDEA
                     KPTVEVDPALAKAALDAALSGIKLPVACDDGGFEQGTPACAAALEADPAVQEQLVKAA
                     MTAAMTEAMVTMTAPTVPVIIPTERRQQLLRLCREVPHGGFCTRVAELSWEAGDPQQA
                     VQALAAACIPGNDTTTCERLPALQAVGASLQPQPATALPCGSYRADGGLMDTLDFGDA
                     GLVGVGWSSHLRARVEEGDIRIRHDRGGDFVLRPLPGGQLLGLDTWTRFQVFVPTGEG
                     SSRCSAPKQFKVLPLPQDCPLALANEDGAEACCAQGKLQGCNILGNRLALSGNWLQAA
                     EHYTTVCRAGVREGCENLVTAQGNGADVDARATLEQLCKADRSGLHVACDVLGTQNWE
                     LITLGGALQKAVDEAAVDDAPAPRNSNRKR"
     gene            20826..21722
                     /gene="hemF"
                     /locus_tag="QEL58_001196"
     CDS             20826..21722
                     /gene="hemF"
                     /locus_tag="QEL58_001196"
                     /EC_number="1.3.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007967076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-dependent coproporphyrinogen oxidase"
                     /protein_id="HDS1675692.1"
                     /translation="MNEFERVRAYLTDLQDRICAAIEAVDGQARFQEDLWQRTEGGGG
                     RTRVLRDGAVFEQAGIGFSDVAGSRLPPSASANRPELAGASWRATGVSLVFHPLNPYV
                     PTTHANVRFFQAQRDGEVVASWFGGGFDLTPFYPFDEDVQHWHRVARDLCTPFGEERY
                     AAHKRWCDEYFFLRHRNETRGVGGLFFDDLHGDFERDFDYLRAVGDGFLDAYLPIVQQ
                     RKDTAYGEREREFQLYRRGRYVEFNLVYDRGTLFGLQSGGRSESILMSLPPRVRWEYG
                     FNPDAGSAEARLADYLVPRDWL"
     gene            21820..22983
                     /locus_tag="QEL58_001197"
     CDS             21820..22983
                     /locus_tag="QEL58_001197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005414888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675693.1"
                     /translation="MPAVVALRPRAAGWRSLLLLVLASASLPAAAQSMACGTYKDSSG
                     NTTLTLESEGRGFLSGPYQATEELRIARQDDVLGTGNLSTGRLENWYFSDNDRTLSTP
                     YREFTRERSAACKVMPEPIEDGCVMNTSECLEALPEAEPQKLHAWCAEGVGAACMRLL
                     ETYQQQAKDASPSTAEPPMPEICKEESPSFDAEGCTTVARQVASEMMGKALLGLQHSV
                     DAPLPPAQLDELIALCRVQQGETFCADTAETLWSSGRLQQAREALQLSCAQRADAPAC
                     GPAKDLGVLASAPGTALAPVTASALPCGSFEAERSVLSQLRFLQDGVVEAGGREQPLR
                     ASLRDGRILIHRELGSDFVLQLLQNGNLAGIDGGNRFAYYERKPAAGNDRCTP"
     gene            complement(23058..23537)
                     /locus_tag="QEL58_001198"
     CDS             complement(23058..23537)
                     /locus_tag="QEL58_001198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF421 domain-containing protein"
                     /protein_id="HDS1675694.1"
                     /translation="MPDLFALAMPWWEFILRAVVVYVVVLGMVRLSGKRALGQITPFD
                     VLLIVLLGNAVQNALLGTDTSLGGGLLLAATLILLNYGVGWVSTRNRRIERLVEGEPV
                     VIARDGRLFDTVLRREQVTRADFEAAMRQQGCLGVEDVELALLEINGHITIIPRKST"
     gene            complement(23866..26640)
                     /gene="polA"
                     /locus_tag="QEL58_001199"
     CDS             complement(23866..26640)
                     /gene="polA"
                     /locus_tag="QEL58_001199"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017159421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase I"
                     /protein_id="HDS1675695.1"
                     /translation="MSRLVLIDGSSYLYRAFHALPPLSNAQGEPTGALFGVVNMLRST
                     LKERPAYVAFVVDAPGKTFRDDLYDQYKANRPPMPDELRSQVEPMCRIVEALGISILR
                     IPGVEADDVIGTLALQGLAQDLKVTISTGDKDFAQLVRPGIELVNTMTGSRMDSDAAV
                     MDKFGVRADQIIDLLALMGDTVDNVPGVEKCGPKTAAKWLAEYQHLDGVMAAAPTMKG
                     KIGENLRAALERLPLNRELVTIRTDVALDARPTTLALREQDVPELTELYTRYGFTQAL
                     KELGAPLPAPTAASEATPSLRGTAAGFARGSAEAPAAGTLDPALAAPGEYETVLTSEQ
                     LQAWVERLQQADLISFDTETDALDAMRARLVGVSLAVEPGRAAYIPVGHDYPGAPAQL
                     PMQQVLDALRPVLQDPAKKKLGQHGKYDLHVLRRHGVDVQGYHDDTMLESFVLNSTAT
                     RHDMDSLALRYLGYSTIKFEDVAGKGAKQIPFSQVGIDEASRYAAEDADITLRLHHAL
                     QPQLLAEPALDSVYRDIEMPLVPVLASIEANGVRIDTDELRRQSQDLSSRMLAAQQKA
                     TELAGRSFNLDSPKQLQAVLFDELKLPAVVKTPKGQPSTNEEALEAIAEQHELPRVIL
                     EYRGLAKLRSTYTDKLPEMVNPDTGRVHTSYHQSGAATGRLSSSDPNLQNIPIRTEDG
                     RRIRRAFVAPEGCQLLAADYSQIELRIMAHLSEDPGLVLAFEQGADVHRATAAEVFGR
                     TLEEVTPNERRAAKAINFGLMYGMSAFGLARNLGIDRGQAQDYVALYFSRYPGVRDFM
                     ERMRQQARDQGYVETLFGRRLYLNDIHARNQGLRAGAERAAINAPMQGTAADIIKRAM
                     VDVDQWLRDSGAPARMILQVHDELVFETESSFVEDLRLQVVERMSQAAKLRVPLVVDT
                     GIGSNWDEAH"
     gene            26739..27023
                     /locus_tag="QEL58_001200"
     CDS             26739..27023
                     /locus_tag="QEL58_001200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014038952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2782 domain-containing protein"
                     /protein_id="HDS1675696.1"
                     /translation="MKTLMLASVLLLAGCASMGGAGAPPVDVKGADVSKRTMDNGDTI
                     EEYRVSGQLRMVKVTPSRGAPYYMYDKNGDGRFDNDKDGVSPVYWKLYSW"
     gene            complement(27078..>28987)
                     /locus_tag="QEL58_001201"
     CDS             complement(27078..>28987)
                     /locus_tag="QEL58_001201"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675697.1"
                     /translation="LAGNNVSVFGRDGVRLGADLRSSGSLTLASSNADIVQVAVPNGV
                     GGSVQSVGAVQVDAGSGRIALGNAGNRFGGALNLSGGDINVAADTLLLGNVAASGQLS
                     LASAGDIRQQGAAQVVGTTRLSAGGDIALQAGGNRFGDAVTVQGRQVALASDGPLHLQ
                     GVTADGLAARSAGRLTLSTANVAGDVTLQGQQLHFGTTRVGGNLQAVGSNGIDQHGTL
                     RVDGSTNLRSNASIALGLAGNDLRGPMSLAGAGIDLASAGDLRIDLLDSHSAAVRLQA
                     GGALDLPSGAIDTGNGDLQLQAGGALRLPAALRGNNITLRSGQDLQLGQDVLAAGVLQ
                     LASGGTLTQTGGVLAAQRLQGSAGGKASLRGDNRIATLGDFGSQGLELKTMQGLQVTG
                     NVQAGAQGLLDVRGGDLLLDGSVQAGGLRLQSSGAIRAGAGGRLLADQLSGRAAGPTM
                     LGDASLFVANAIGTLGDFQSPAGFSLTNAGTLTLASLNGSAFSVDAGNNGFHLKVQGG
                     DIRQLGTTPVLAGDSHWWSSGGIGTQPLPIYLTSAGRTHTIDFIGRPPAYFHAVGTDG
                     RPLVVGDGPDPEAMRPGVLAQGAVLPRAVYVDAAAAAVEQRAIGITYPGIRLPAGTAR
                     ACDGDAAGCVQ"
BASE COUNT         4719 a        10084 c         9814 g         4370 t
ORIGIN      
        1 cggacgcgac catggcagac ccctacaaca gcggcatccc ctcccctccg gcgctgcgct
       61 tcgacgattc gctggtcacc accgccttcg agctgcccgg ccaccgcgtg gcgcgcaacc
      121 tgggcgtggt gcgtggcatc accgtgcgct cgcgctcgat cgtcggcaac ttcctgggcg
      181 gcatccagac cctgttcggc ggcaacatca ccatctacac cgaactgtgc gaacaggccc
      241 gcgaggaaac ctaccgcgac atggtcaagc acgcgcggca actgggcgcc aacgcgatca
      301 tcggcatgcg ctacgacgcc accgacgtga tgaccgggct gaccgaggtg ctgtgctacg
      361 gcacggcggt ggtggtggaa cccctgcgct gaggccggtg tgccgccggg cgtgattcac
      421 gccaccgggg gcacctccgg cacctcgacc tgctgcaccg gcagggtcac catcatcacc
      481 gtcgggtcgt ccgggtccag cttcgtcttg aagcccaggc tctggcacat cgccagcatg
      541 gtgctgttct cgcgcagcac ctggccctcg accacgtcca ggcccagcca cttggcgtac
      601 tcgatcatga tcgccatcaa ccgccagccg atgccgtggc ccttcaggtc cgaccggatc
      661 aggatgccgt actcgccacg gtggtaatcg gcgtcggcgt gcaggcgcac cgcgccgagc
      721 atttcgccgc tgcgcggttc aatcgccacc agtgcgatcg agcgcgcgta gtcgagctgg
      781 gtcaggcgcg cgatgaattc gtggctgaag tgcttcaccg actggaagaa gcgcaggcgc
      841 aggtcctcgt cgctgacccg ggcgaagaac gcgcggaaca gcgcgtcgtc ttccggccgc
      901 accggccgca cgaaggcacg gccgccgtcg gacagttcga tggtgcgctc ccactccttc
      961 gggtacggga acaccgagaa gcgcggatgg ccgcggccct tgtgcaggat gcgcgagggc
     1021 gcaatggcga cgcgcgcatc cagggcgagg atgcccttgc catcgaccag cagtggattg
     1081 atgtccagcg tgcgcacttc gggaatgtcg gcggccagct gggccagctt caccaatgcc
     1141 agcgccagtg cacgctcgtc ggcggccggc acgtcaccgt aggccttgag gatgcgcgag
     1201 gcacgggtct ggccgatcag ttcgtgggcc aggcgcaggt ccagcggcgg cagtgccagt
     1261 gccttgtcgt tgatcacttc caccgcagta ccgccacggc cgaccacgat caccgggccg
     1321 aacgtggcat cgtcggcgat gccgacgatc agctcgcgcg ctttcgggcg gacgatggtc
     1381 ggctgtacca gcaggccatc gatgcgtgcg tccggccgca gctggcgggc ccgcgacagg
     1441 atcgcattgg ccgcgctctg caccgccggc agcgtgccca ggttgaggcg cacgccatcc
     1501 acttccgact tgtgcggaat gtccggcgac aggatcttca acgccacgct ggcgccgcgc
     1561 tccagcagcg gttgcgccag gtccatcgcc tcatgcgcat cgcgcgcgtg catcaccggc
     1621 gcggacggaa tgccataggc cttgagcagt tcgtgggtgg ccagcgggtc cagccactgc
     1681 tggccgttgg ccagcgcggc atcgaccagc gcgcgcgcag ccgccgcatc gacattgaaa
     1741 tcctgtggca ggctgggcgg cgtttccatc agcgcgttct gcgcttcgcg gtaacgcacc
     1801 agatgctgga agccacgcac ggcttcggcc tcggtcggat aggtcggcac ccgcgccgcg
     1861 ttgagcgtgg cggtggcctg gtcatcgttg cccagccaca ccgcgaatac cggcttgtcg
     1921 cggtgatggc gcgggcgcag gccgagcgtg cgggtcagcg cctgtgccgc atcggcggac
     1981 gaggtgaacg cggtcggcac gttgaccacc atcaccgcgt cgttctcgtt gtcggccagc
     2041 agcgcttcga tggccgaggc gtagcggtca ccgtcggcat cgaccacgat gtcgaccgga
     2101 ttgctgcgcg accagccctg cggcagcacc gcgtcgagct tttcgatggt gctgtcggac
     2161 aggttggcca gcgtgccccg cagtgcgatc agctggtcca ccgcgaggcg gccgacaccg
     2221 ccgccgttgc tgaggatggc caggcggcgg ccggggaagg tgcccagccg gcccagcgac
     2281 tcggcggcgg tgaacagttc gtccagcgca ccgacgcgca gcaggccggc gcggttgaac
     2341 gccgcgccgt agacatcgtc ggcgcgcgca agtgcctgca cgtgggtatc gcggctgccc
     2401 ggctgcacgc gttcggcgcg gcccgacttc accaccacca ccggcttggc acgcgcggca
     2461 gcacgcgcgg ccgacatgaa cttgcgcgcg tccttgatct gctcgacata gagcaggatg
     2521 gcgcgggtgc ggtagtcagt ggcgaagtaa tcgagcagat cgccgaagtc gacatccatc
     2581 gtgtcgccca gcgagaccac ggcagagaaa ccgaccgagc gcgccacgcc ccattccacc
     2641 agtgcggcgg caatggccga ggattcggag atcagcgcga ggtcgccggc ctgcgggaaa
     2701 tgcgcggcga tgctggcgtt gagccgtgca tgcggcgcga tcacgcccag gcagtgcggg
     2761 ccaaggatgc gcaggccatg cgtgcgcgcc accgcctcca cctgcgccga cagcgagccg
     2821 gggccttcgc ccaggtgcgc ggtgaggatg atcgccgcct gcacgccacg ttcggccgcg
     2881 gtgcgcacca cctgcggcac gatcgtcgcc ggcgcggtga tcaccaccag gtcaggcacc
     2941 cagtccaggt ccttcagccg tttgaccgtg cggatgccat cgatctcggc atgtcgcggg
     3001 ttgatccagg ccaccttgcc gggaaagccg gtgccacgca ggttgcgcat caccgcacgg
     3061 ccggccgaac gctcgcgcgg gctgccaccg atcaccgcga ccgactgcgg gcggaacacg
     3121 gactgcagat ggtaggtact catgcgccta cggtacccaa aaaggggacg gaggggatta
     3181 agtcgtttgt ggcataaacg acttaatccc ctccgtcccc tttctgttct gcgtgccgac
     3241 caaggtcggc acctaccgca gcgcggggtt ccggcttaca gcagcgtgcc gtgcaggatc
     3301 atcgcggcga tgctgaaata gatcaccagg ccggtcacgt ccaccagcgt ggccacgaac
     3361 ggggccgagg cgctggccgg gtcgaagccg aggcgcttca ggatgaacgg cagcatcgag
     3421 ccggacagcg agccgaaggt gacgatgccg accagcgccg caccgatggt gatcgccagc
     3481 aggatccagt gctcgccgta gtcgtgcagg ccacccagct gccagatcac gatgcgcacg
     3541 atggccaggc aaccgaggat ggcacccagc accatgccgg tcgggatctc gcgcagggcc
     3601 accttccacc agtcgcgcag gcgcagttcg cgcagcgcca ggctgcggat cagcagcgag
     3661 gtggcctgcg agccggagtt gccacccgaa ctcatgatca gcggaatgaa cagggtcagc
     3721 accaccgcgc gtgccagctc gtcctcgtaa tgctgcatcg cgctggcggt gagcatctcg
     3781 cccaggaaca gcacgctcag ccagccagca cgcttgcgca gcatctcaag gaagccgatc
     3841 tgcatgtacg gcttgtccag cgcctccatg ccgccgaact tgtgcgcatc ctcggtggat
     3901 tcctcgatca gcgcatccag cacgtcatcg acggtgacga tgccaagcat ctgctgctgc
     3961 gcatcgacca ccgggatcgc cagcaggtcg tggcggcgga tcagccgcgc cacttcctcc
     4021 tggtccatca gcgcgtcaac ggtcaccggc ggattgacct gggccacgtc caggatcgat
     4081 tcctccggca acccggtgat cagccggcgc atggtcacca cctgctggag gtgctggctg
     4141 gccgggtcca gcacgtagat cgcgtacacc gtttcgcggg tgcgctcgac ctggcggatg
     4201 tgctgcaggg tctgcgccac ggtccagctg gcgggcaccg ccacgtactc ggtggtcatc
     4261 agcgcgccgg cggtgttggg cgggtagctc agcagcttct ggatggcctg gcgggcatcg
     4321 gtgcccagca gcgggatcag ccgcgcgcgc tcgtcctcgt ccagctcgtg cacgatgtcg
     4381 gtggcgcggt cgtcggccat cagcccgagc agggcggcgg cgcgcgccgg cggcaacgcg
     4441 gccaccagct cgccactgcg gtgcagttcc ggcgcttcga gcatcttcac cgcgcgcggc
     4501 aacggcagcg ccgccagcgt gtccgcggcg cgcgtcagct ccagcgtatt gaggaactcc
     4561 accgcgtcgg cggtgttgta gttcgccagg ggtgcggcca gggcagcagc atcggcccct
     4621 gcgcgcagca attgcttctg gttcatcggt tctgccttgt gggggtgcga cctcgcgcaa
     4681 cgccaacgca ggcaaaccgt cccgatgtca ggcggtggcc atcgctggcg tcgaacgagg
     4741 tcgacttcta ctgtcgctgg acatgggttg gggactccgg gatgcgtgtg ccggcggacg
     4801 cgccgccagc ggcggggagt ctggacctgc cgggcaggca ggtcaacccg gggccagccg
     4861 gcagcgttgc ccgcacgcgt gtcctcgtgc gtacacgcac cggcgcgcat aatgtggcag
     4921 tggcgttcgc catgctttcc ctcctccgaa cggacgcgcg gccggttccc ccgatgacca
     4981 ggtactccca tgcatagcgg tggtctggaa ctggcgctgg tgctgctgct ggcggcggtc
     5041 atcgctgtgc cggtgttcaa gaagttcggc ttcggcgcgg tgctgggcta cctggcggcc
     5101 ggcgtggtgc tgggcccgga cgggctgggc ttcgtgcagg acgccgaccg catcctcggc
     5161 gccgccgaga tcggtgtggt gatgctgctg ttcgtgatcg gcctggaact gtcgccggca
     5221 cgcctgaagg tgatgcggcg ctcggtgttc ggtgccggtg cggcgcaggt ggcgctgtcc
     5281 gggctggtgc tgggcggcct gttgctgctc gaccatttcc agtggaaaag cgcgctggtg
     5341 gtgggtgtgg cgctggcgct gtcgtccacc gcggtgggcc tgcagctgct gtccgagcac
     5401 aaggcgatca acagcgacca tggccggctg ggctttgcga tcctgctgtt ccaggacctg
     5461 atcgcgatcc cgctgctggc ggccattccg ctgctgggcg gggtcaagaa cgagacgctg
     5521 cgctgggagg atgccgccgt ggcgctgggc gcgctggcag tagtgatcct gtgcgggcgg
     5581 ccggtgctgc gcagggtgtt cagcatcatc gcgcgcaccc gcagcccgga agtgttcacc
     5641 gccaccgccc tgctggtggt gctgggcacc gcctggttca tgcaggaagc cggcctcagc
     5701 cccagcctgg gtgcattcct ggccggcgtg ctgttgtccg actcggaatt ccggcacgaa
     5761 ctggaagcac agatcgagcc gttcaagggg ctgctgctgg gcctgttctt cattgcggtg
     5821 ggcatgggca tcgacctcga ccgcatcgcg tccgagccgt ggctgatcgc cgccggcgtc
     5881 ggcatcctgc tggtggtcaa gttcggcctg ctgtacgtaa tcggacgtat tgcaaggctc
     5941 agttcgcgac agtcgctgct gctgggcagc gtgctgtggc tgggcggtga attcgccttc
     6001 gtggtgttca acgaagcgca gcgcgcgcac ctgctgggca acgccaacca tgaccggctg
     6061 gtggccattg tcggcctgtc gatggcgatc acaccgctgc tgatgatcgc gctgctcaag
     6121 ctgctcggcc aggagaaggc cgcaccgcgc caggccgccg aggctgacaa ggtggcaccg
     6181 gacaatcggc cgaaggtgct gatcgccggc atgggccgct tcggccaggt gatcgcgcgc
     6241 ctgctgaccg cgcagaaggt gccgttcgta gcgctggagg cgaacccgga caccgtggcc
     6301 gacctgcgcc gcttcggcaa ccagctgtac tacggcgacc cgacccggcc ggagatgctg
     6361 cgcgcggccg gtggcgagca catcgacgtg ttcgtgatca ccgtggatga cccggagacc
     6421 aacctgcgcg cggtgcgcat ggtgcgccgg ctgtacccgg atgcgacggt gctggcgcga
     6481 gcgcgcaacc gccagcatgc gtggcggctg atggacatgt cggccgagcc gttccgcgaa
     6541 gtgttcggca ccagcctgga gatgagcggg cgtgtactga ccgcgctggg cattgcggcc
     6601 aacgtggccg agcgccatgt gcagcgcttc cgcgaacacg acgaacagtt gctgcgcgac
     6661 cagtacctgg tctacgacga cgaggccgca gtgatccaga cctcgcgcga tgcgcgcaac
     6721 gacctgatgc acctgttcga ggccgacgcg gaaagcgacg acacctaggc gtgccgacca
     6781 aggtcggcac ccacccgatg gttggcgaac ccggtcgtgc cggccgctgg gatcagccgt
     6841 tgtcgcgcag gaaccgggcc atcgaggaaa cacccggcac gcgcggctcg aactcaccgg
     6901 ccacgtcgat gaagccgcgc atcaccgcga tctcgcgtgg gctgcggttg aggctgtcgc
     6961 gcacttccgg atcggcaccg gcacgcagca ggcgctgcac cagcagcggc aaaccgtgca
     7021 gggcggccag gtgcagcggg ccgaagccgc gcgggtcgcg cacgtccagg ctcacgtcct
     7081 cgtccagcag gcgctccacc gcggccatca ccacctgctc gtcgcaggcg gtgcccggct
     7141 cggcgcgtgc gcccagcagc agcagcagcg gcgtgaccga accggcagca gcctggtccg
     7201 gttccgcacc ggccagcagc agggtgtcga gcagggccag caggcgcgag cggtcacggg
     7261 cactgaagcc atacagcgcg gcacagtgca gcggacccag ctgctgcgcg tcaccggcgt
     7321 gcacgtcggc accggcggtg agcaggcgcg cgacgatgtc cggcaggccc agcgccgagg
     7381 ccagcatcag caccgtcaca ccgcccggca ggcgatgttc cagcttggca ccggcatcga
     7441 gcagggccga gacgatatcg acctggcgca tgctgaccgc cgccgacaac ggcgtggcac
     7501 cactggccgc cgcgtgctgc ggatcggcgc cacgcgccag cagcagatcg gtcactgcca
     7561 gatggccacc accggccgca cgcagcagcg cggtgcagcc ctgtgcatca accgcgtcga
     7621 cggcgaatcc cagatcgatc aggcggcgca cagcgtccac atcaccggcc atcgcggcgg
     7681 ccggtagatc tgcctcgcgc agggtgcggc gtggcaacgg ccacacccgc cagtccagcc
     7741 agtcggccag gtcacggcgc ccaatcgaca gcgccacgcc cagcggcgtc tggccatcgg
     7801 cggcgcgtgc ttccggcgag gcaccgtgct gcaccagcag cttcaatgca ccttcgcgag
     7861 ccagcgcggt ggccagatgc aaggcggtca tgccgtggct gtcgcgcgct tcgcgatcga
     7921 cgccagcctt caacagggcc tgctgcaggc gcagccaacc caggcgtacc gccagcgaca
     7981 gcggcggatc gccggccggc gaggccgcaa acggatcggc accacgttcc agcaattcca
     8041 gcgccagctg ttccagcccg cgggcggcct ggtcgtgctg ggcgcaggcg gcgaggaagc
     8101 gcgcgaggcc accgcgtccg gccggcgaca ggccacgctg cagcatcacc tgcagtgcag
     8161 gcaccgcatc aatgccgcgc gacagcaggg cgaacatcgg cgtgtcggcg caggcgtcac
     8221 gcacataggg atcggcgccg tggcccagca gccagtcgac cgcacgcggc tccagcgcca
     8281 gctcaggatc gagcagcagg ccacccagtt cttccggctg gcacagcctg gccagcgcgg
     8341 ccatgccttc ggtgttgccg aagcccagcg cttcacgcag cagggtcagc ggcggacggt
     8401 ccggcagcag gccgctggcc atggccgctt cgccgcgctc ggccagccca tcactgacgg
     8461 cggccggcaa cggataggac gggtccagca gtgcgacgat cgcccagcgg cccgcttcgg
     8521 cggcgtagtc caccgcgcgg cggccgaccg gatcggcggc atcggcggcg atgcccagct
     8581 caaccaggcg cttgatcagc agcggcgaca catcctcggc catcaccgcc agctgcaccg
     8641 cgttgcggcc ttcgccgtcc actgcaacca ggtccggctt gtgtggaagc aggtgctcga
     8701 ccacggcggc acggccggca cgggccgctt ccagccacgg cgtacggccc agcgcatcgc
     8761 gcgcttccag gttggcgccg gcaccgagca gcacgccgat gatctcgacg tggccggcca
     8821 gtgcggcctc gtgcagcgcg ctgcggcgtt ggcgatcacg cgcgtcggcc cgtgccttgt
     8881 gcttgagcag cagctgcacg ccggccggat catcgtcttc ggtggcggcg gcagccagca
     8941 gcaccggggt gccttcggcc ggctcgctgc gggcaccgcg ttcgagcagg aaacgcgcca
     9001 ggcgccagtt gccgacctga caggccaccg ccagcggtga ccagccgtcg ttgttcagcg
     9061 cgtcgacttc ggccgcggca tcgcgcagca gcgccgccac gcccgggtcg gaactgcgcg
     9121 cagcatggtg cagcggcgtg ttgccgtctc cgtcggtggc gcgcgaatcg gcgccgttgg
     9181 cgagcagggt catcaccgct tcggggcggc catgccagct gtcacgggtc gccgccagca
     9241 gcggagtcat gccgcggtgc ggcgcgttca cgtcgacgcc gcgggcgatc agctcgcgca
     9301 gcaggcgcag gtccggcagc accgcggcca gtaccgccag gctgcgctgg tcgcgccagt
     9361 tcgggtccgg caatgcatag ggatcggcac cggcctgcag cagctgcagg ccgcggtcga
     9421 tgcggccatg gcgggcggct tcgtacaggg tcggggtcag ttcctgcggc gccatcgcct
     9481 ccagcggcgc ggtctcggcc gcggcggcga acatcggttc gtgttcgtgg ctggtcgcgt
     9541 tcaacgcgcc agtacgcaac gacaccagcg gtgcgggcgc cacccgctgc agcagcaggt
     9601 gcagcagcgg cgacagcacc accaccgcca gcgcggtcgg ccatcgtgca ctttcaggca
     9661 gcaggtcggg ccaggccggc agcaccacca gtgccgccag cgcgatcacc agcgcggcca
     9721 caccgaggcc gcgccaggcg gtcaggtcgc gcccggccag cgcctgccag tgttgggcca
     9781 ggctgccatc caggcgctcg acatcgttcc acaacggcca ggtgcgccag gccgccagca
     9841 ggccggcact gaccagcacg ctcaggccca gcaccgcggc caggctgccg ctatcgcgca
     9901 gcgccgccag cggccaggcc agcagcagcg ccagcaggac cggtgcggcc gcccacagcg
     9961 ccagcagcgc gggcaaatcc tggcgcgcaa ccaccttcaa cggcagcagc gcgcggctgc
    10021 gccgccacca cgacacgccg agcgcgaacg caggctgcgc cagtgcggca agcagggcgc
    10081 ccgggacgcc gcccacggca gcgcccagcg ccagcacggc gccaacagtg aaggcgatcg
    10141 acagcgcgcg cggacgggag ggatcagtca tagtgccgcg gcatcaggct ggccaccgaa
    10201 ggcggcacct gcaggtagaa gccgcgttcg ctcatttcgc tgcggacctt gtccgggtcg
    10261 gcctgcgcca ggcggcgctg ggcatccagg gcaacgtcca gcacgaaagt gagcgtcccc
    10321 agcgatttga gcagcggcgc aggcagcgcg ctgaaatctt cgcgtcgggg aacgtagacg
    10381 taggtgtccg gcttgagttg gcttttatag acgtaggcgt gcatgtccgc gggacaataa
    10441 cccgggaaga gccatgattg tgtcggaaag ccgacaccgg ggaaagccgt cagccgacga
    10501 tggcggcgtg atcgacggtg tttccccgac gaggttcagc aatgtggcga cggcgttcag
    10561 ccttggcccg atgctcagtg atagccggcg tcggcgtgca ccttgccgcg gaacacccgg
    10621 taggaccacg ccgtatagcc gaggatgacc ggcagcagga tcaccagccc gaccagggtg
    10681 aagcccagcg atgatgccgg cgcagcggcc tgccacaggg tcatcgatgg cggcaacagg
    10741 tacggccaca tgcccagcac caggccgagg aagccgagca cgaacagggc aaggctgagc
    10801 aggaacggcg gcaggtcacg gcgcggatgg gtggcgctgc gccacaacgc ggccgccacc
    10861 gccagggtca gcagcggtac cggcgacagc caccagaagt tgccatcgct gaaccagcgg
    10921 tccatcaggc gcgactgcag gaaaggcagc cagctgctga ccaggcccat cgccgcgatc
    10981 accgccacca ccagcggccg ggtcatctgc cgcgccagcg cctgcacgcg gccttcggtc
    11041 ttcaggatca gccaggtact gcccagcagt gcgtagccgg ccaccagcgc agcgccggtc
    11101 aacatcgcga acggactgaa ccaggcgaac gggccaccgt gatagacgcc gtcctgcagg
    11161 ggcaggccct gcaccagcgt gccgaggatc acgccctggg cgaaggtggc cagcagcgag
    11221 cccagtgcga acgccacgct ccacaaccgg cgtgagcgat gcgccttgaa gcggaactcg
    11281 aaggccacgc cgcggaacac cagcgccacc accagcagca gcaccggcag gtacagcgcc
    11341 gacagcagca ccgcgtacgc cttcgggaac gccgccagca ggccggcgcc acccagcacc
    11401 agccaggttt cgttgccgtc ccagatcggc gcggcggtgt tcatcatcag gtccagctgt
    11461 tcctcgtctt cggcgaacgg cgcgaggatg ccgatgccga gcacgaagcc atccagcacc
    11521 acatacatca gcacaccgaa accgatcacc gcgaaccacg ccaccggcag ccaggtcatc
    11581 aggtccatgt cagcgatcct ccagcggttc gtcggctgcc gacagcgggc gcgccggggt
    11641 gtggctgccg tggtccagcg atggcccttc ggcatacggc tgcggcccat ggcgcaggat
    11701 cttcaccagg taccagatac cccagccgaa cacgaaggca tagccgacca cgtagacacc
    11761 cagcgacagc gcggtcatcc acgcgctctg cgggccgacc gcatcggcgg tgcgcagcac
    11821 gccatacacc acccacggct ggcgccccat ttcggtgacg aaccagccgg acagcagtgc
    11881 gatgaagcca ctcggcaaca tccagttcca gccgcgcagc agccacggcg aatccagcag
    11941 cttccggcgc cacagctgga atgccgagac ccaggccagc agcagcatca gcgtgcccag
    12001 cccgaccatg atgcggaagg cgaagaacac cggcgtcacc ggcggccgtt cgctggccgg
    12061 taccgacgtg agcggatcga agctgccgtc cagcgaatgg gtgaggatca cgctgcccag
    12121 cttcgggatc gccacttcga aatcgttgcg ctcttccttt tcgttgggca gcgcgaacac
    12181 caccagcggc acgccctcgc cttccttggt ttcatgccag tgcgcttcca tcgccgcgat
    12241 cttcatcggc tggtgcttga gcgtgttcag gccatgcatg tcgccgacga agatctgcac
    12301 cggcacggtc agcgccgcga acgctaccgc cgcgaccagc atgcgccggc cggcttccac
    12361 gtgcgtgccc ttgcgcaggt accacgcgcc gacgccaccg atcacgaaac aggtggtgat
    12421 gaacgaaccc agcgccatgt gcgccagtcg gtacgggaac gaggggttga acaccacctg
    12481 ccaccagtcc accgggtgca cgatgccatt gaccatctcg tagccggccg gcgtgtgcag
    12541 ccagctgttg gacgagagga tccagaacgt ggaaaacagc gtgcccagcg ccaccatgca
    12601 ggtggacagg aaatgcaggc gcggcgagac ccgcccccag ccgaacatca tcacgccgag
    12661 gaagctggct tccaggaaga aggcggtcag cacttcatag gtcagcagcg ggccgatgac
    12721 cgtgccggcc acttcgctca gccgcggcca gttggtaccg aactggaagg ccatgacgat
    12781 gccgctgacc acgcccatgc cgaatgacac ggcgaagatc ttctgccaga agaaatacag
    12841 ctcgcgccac acgggcagtt tcgtgcgcag ccagcgccat tcaatgaagg ccagccagct
    12901 ggccgtgccg atggtgaagg ccgggaacag cacgtggaaa ctgatgacga atccgaactg
    12961 gatccgggac aacaacaacg cgtccaaggg acgcctcctg cctgcgaccg gtgggatacc
    13021 ggaccacttt aggaggattt ggttaagccg ggatgcgacc gggtgacgcg ctgcttcact
    13081 ttgtcgcagg ggtcaaccgc tctggtagct gccaaccttg gttggcacac acgcccaaac
    13141 gccgaccaaa gtcggcatct accaggccca ccgcccggag ggcgcctcag tgccagaaat
    13201 accaggccgc ggcagccagc agcgcgccaa acaacagcac ctgcaccacc acgtaaagca
    13261 caccgctatc gcgcgattcg gctgtgatgc gcttctgcag tgcctcgctc acatccggcg
    13321 tctgttcctg ctgcgcctgt tcacgcaacg cctgtgccag cgcgcgctcg cccgcatcgc
    13381 gagggtcggt cgattggctc acagcagttc tccggcggtg gcgtgccgcg tcagctcctg
    13441 cttcaggatc tgccgcgcgc ggtacaggtg gctcttgatg gtaccgcgcg ccagcccggt
    13501 gacctgctcg atctcggcca gatcgaagtc ctccagataa tgcaggccca caatcaatcg
    13561 ctgcggcgca ctcaatcgct ccagtgccgc gcccagctgg cgaccggcct gcagcgattc
    13621 gctgaattca gccggcccgg ggccttcatc gccgatgccc agttcctcgg gcacctccac
    13681 cgccaccatc cattgcgcct ccagccgccg ccggcgcagg tgctgcaacg cagtggtgta
    13741 ggccacccgt gaaacccagg tacgcagcga ggattcaaag cggaaccggt gcagctggcg
    13801 gaacaccgcc agaaaggtct cctgcagcag gtcggccacc tggtcgcggt cgccgaccat
    13861 gcgcccgatc acatgcgcgc aggtgcgttg atgggtctcg accaactgcg aaaacgccgc
    13921 ctgcgagccg tcgatgatgg cccgtaccag ggcctggtcc gcatccagcg gtgcagcggg
    13981 tgcggtcgtc gccgctgcat cgtggtggcg acggccccgc agtgccgaca atgcttcgcc
    14041 gagcaggctc atctacgggg cgccccctgt gcccgtggca tgggccagct cagcccttgc
    14101 gcgccgcagg acgggtgaag tgccaggcca gcagctggcc gaggccggcg ctgccaacca
    14161 gcgcggcggc ggcaccgaag gtcaggtcac gggcgccgat gacttccagc agggccatcg
    14221 ccagcgccag gcagaccagg ctgatgcccc agcgcagcgc gccctggcgg cggcgctcct
    14281 cttccagcac ggccagcgag cggatcactt cctccggcac gtgtggggcc accagcttgc
    14341 tgcgggcgcg ggcatcggca atggcatgga tcgcataggc gatgcagatg aagagggtga
    14401 tcgggatcag ttcctgcatg gtcgggctcc tgttcggtgg atgatgcggg ttcaggacaa
    14461 tggatgcgcg agcccggcaa ccggttgcag cagtttgccg attccgctgc catgacctgt
    14521 ggcccctgcc cgcggccggg gcggctgcta cccttgcccg gtttcctctt ccggtgccgt
    14581 ccgcccatgt cccgagtgct gcccctgtcc ctcctgctgt cggccgtgct ggccgcaccg
    14641 gccgcgcatg ccgcgccgac gccgatcacc atcgaacagg ccatggccga cccggactgg
    14701 atcgggccgc cggtcgagaa ggcctggtgg tcgtggaaca gccagcaggt ggagtaccag
    14761 ctcaagcgca acggcagccc ggtgcgcgac accttccgcc agccggtggc cggtggcgtg
    14821 gccgcacagg tggccgatga ccagcgcggc accctggacg tggccgagcc ggtctacgac
    14881 cgcagccgca gccgcagtgc gttcgtccgc aatggcgacg tgttcgtgcg cgacctgcgc
    14941 agcggcgcac tgacccagct gacccgcagc aacgagcgcg caggcaacgt gaacttcgcg
    15001 gccgacaacg gcgtgatctg gcgcgtcggc cagagctggt tccactggac tgccgccagc
    15061 ggcgtgcagc aggtggccag cctgaaggcc gagaaggacc cgcgtacgcc gccgaaggcc
    15121 gacgtgctgc gcgaccagca gctgcgtacg ctggaaaccc tgcgccgcga ccgcgaccag
    15181 cgcgaggcgc tgaaggacca ggaccagcgc tggcgccagg ccgacccgac ccgcgcgccg
    15241 ggcccggtgt acctgggcgc cgatgtggaa attgccgaca gcgtgctgtc gccggacctg
    15301 ggccacctga tcgtggtgac caagccgaag gacttcgacg acggccgtgg cggcaagatg
    15361 ccgctgtacg tgaccgagtc aggctacgag gaaaccgaag acacccgcac ccgcgtcggc
    15421 cgcaacggct tcgagccgca caccctgtgg tacgtcgacg tgcgcaccgg caaggccgag
    15481 aagctctcgc tgtcgggcct gccgggcatc ggcaccgatc cgctggccga actgcgccgc
    15541 aaggccggca aggacgcact gaagggcgag cgcagcctgc aggtgatgag cgatttcatg
    15601 ggcggtggca tccgctggag cgccgacggc cagcaggctg cagtaatgct gcgtgccaac
    15661 gacaacaagg accgctggat catcagcgtc aacgccgccg acggccgcgt gcagaaccgc
    15721 caccgcctca ccgacaacgc ctggatcaac tggggcttca acgatttcgg ctggatggcc
    15781 gatggccgca cgctgtggct gctgtctgag gaatcgggct tctcgcacct gtacacccag
    15841 gccggcaccg ccaagccgca ggcgctgacc agcggcaagt gggaaacctc ggcgccggtg
    15901 ccgtcggccg atggcaaggg cttctacttc ctgtgcaacc agcaggcccc gcatgactac
    15961 gaagtctgcg cggtcgacac cggcagccgc caggtgcgcg agctgaccag cctcaacggc
    16021 gtggaagact tctcgctgtc gccggacggc cagcagctgc tggtgcgcta ctccggcgcc
    16081 tacctgccgc cgcagctggc cgtgctgccg agcaccggtg gccaggcgcg cgtgctgacc
    16141 gacacccgca ccgccgacta caaggcgcgc cagtggatcc agccgaaact ggtggcagtg
    16201 ccgtccaagc atggcgccgg cgtggtctgg gccaagtact acgaaccgga aaacaaggag
    16261 ccgggccgca agtacccgat cgtgatgttc gtgcacggcg ccggctacct gcagaacgtg
    16321 caccagcgct acccggccta cttccgcgag cagatgttcc acaacctgct ggtgcagaag
    16381 ggctacatcg tgctggacat ggattaccgc ggcagcgagg gctacggccg cgactggcgt
    16441 acggcgatct accgcaacat gggccacccg gaactggaag actacaagga cggcctggac
    16501 tggctggtcg acacccagca gggtgaccgc gaccacgccg gcatctacgg cggttcctac
    16561 ggcggcttca tgaccttcat ggcgctgttc cgctcgccgg gcaccttcaa ggccggcgcc
    16621 gcgctgcgtc cggtggtcga ctggcaccag tacaaccacg gctacaccag caacatcctc
    16681 aacaccccgg acatcgatcc ggaggcgtac cgcgtgtcct cgcccatcga gtacgcgcag
    16741 aacctgcagg acaacctgct gatcgcccac ggaatgatgg atgacaacgt gttcttccag
    16801 gactcggtga acctcaccca gcgcctgatc gaactgcaca aggacaactg gtcgatcgcg
    16861 ccgtacccgc tggaacgcca cggctacgtc cgtgccgatt cctggctgga ccagtacaag
    16921 cgcatcctca agctgttcga gcagaacctg aaatgagcac tgccgcggcc acgatagaga
    16981 tcgtggccgc ggtcatcctg gatgaccgtg gccgggcgct ggtggtgcgc aagcacggcg
    17041 cccaccgctt catccagccg ggcggcaagc ccaaacccgg cgaagcgccg ctgcaggcgc
    17101 tggcccgcga gctggacgag gaactgggcg tgcagctgcg cgccgatgcc accctcgcgc
    17161 ttggcgcctt cgaagactgg gcggtgaacg agcccggcca tcgcgtgcgg gcgcaggcgt
    17221 ggtgggtgca ggtggacggt acaccgcagg cgcgcgccga gattgccgaa ctggcctggg
    17281 tgccgctgca gccgccgcac ggcctgccct tggcaccgct gagcgaacac catatcctgc
    17341 cggccgtcgc cacccgggtg acggcccgct gaccgcgcgg gtgccgattg caaggacacc
    17401 ggatgtcagt gccgctcccg ccgccctcgt tgcagccttc gccctaccac gcgtggatcc
    17461 ggccactggt ccaggcgtcc ttctggctgt ccgcgctgct ggccggctat ttcgtgctgc
    17521 aggggctgct ggtgtggccg ctgcacgacg ttccactctg gcagctgctg gcgggtgaag
    17581 cacagcatcg gcagatgcac agcctggcct ggctcctggc gcacccggtg ggcgcctcga
    17641 tgatcgctgc actgctctgc ctggtctcgg ccgtggccag ctgggggctg ctgcgcgaac
    17701 gctactgggg cctatggagc ttcgtggtga tgctgctgtt gagcgcgctg gccaatttcg
    17761 cgatcacctg gtggtgggac gtgttcatgc gcgacatgat cgtgctgctc gccgacgggc
    17821 cggagatgca gcagtcgctg cagccgcgtc gctggatgat gaccttcacc ctgctcggca
    17881 cttcagtgct gttcctgggc ctgcagggtt ggctggcctg gcgcctgttg cggcccgata
    17941 tccgctcgcg cttccactga gccccacccc cttctcgcac gacaaggacc gtcgcatgcg
    18001 cttgctggct cttttccctg ccctgctgct gctcgccgcg ctgcctgcca gcgccgatgc
    18061 cctgcgctgc ggcgagtatc gcagcctcga tgacggcatg gcactggtgt tcaccagccc
    18121 cagcaacggt taccgccaca acggcatcgg tgagccggag ccgctgtggg tcgatcacag
    18181 tgcggcacag acccgcctgg tcatgctcga tgatggggtg gcggagccgg tccggatcag
    18241 cgccgatggg cagcgcatcg aggacagcgt gacggtggtc tacaccctgc gccagcccgg
    18301 ggcctgcacc gccgaaccca gcgcggtggc cggcagctgc cacgctgctg gcagctactg
    18361 catggtgcag ctgccaacgg cctcgcccgg ccaggcccgg cgcgcctgcg acgagggcgt
    18421 gggtgcgggc tgctcgacgc tgctgcggct gatgcgtgag ggcagtgcgg cggatgctgc
    18481 cgatgacgcc ggcccggccg tcttcgagcg cccgccgccg tgccgcgaac acaccgccgg
    18541 gcacgatcgg caggcctgcg aagccatgac cgacgatgca ctggccaccg ccatgcggcg
    18601 ggtggcccaa cggctggcac aggaagacga agacacgctg gatgcgccgc ttccggccgc
    18661 tgcacgcgat cgcctgcagc agttgtgcct gcaataccgt ggtgggcgct tctgcgtcga
    18721 agtggccgcg cagcagctga tcgcgctgga gcccgcattg gcggtgcagg ccctgcaggt
    18781 cacctgcgat ggcggccgcg tcagtgcctg cgaacgtacc gcaccattgc gtgaactcgg
    18841 tgccgacctg cgcctggtgg cgctccaaca tgtgccgtgt ggtcgctacc aggctgacgg
    18901 tggcgtgatc gacatgctcg acttcggcga tggcacgcag gcccgcctgc acgaaggcgc
    18961 cgtccagctg cagcagaacg gcgaaaccct gacgctgcgc cagctcggca atggcgacct
    19021 gcttggcatg gatgtgcaga cggcctacca gcgttaccaa cccgtgcccg gaacggcaca
    19081 atgcacgccc ccgcgcgagg gccgtggttc gccgtagcgc ctggagtttt ccgttcgatc
    19141 gtcaaggaga cgaaatgcat tcacccgcac cgcgccgccg ctggctggcc tgggcgttgc
    19201 tgctggccgc gccgatggcc gccgcgcagt cactgcaatg cggcctgttc aaggccgatg
    19261 aaggcagcag cacgctgcgc atcagctcac ccaaccgtgg cgagcagaag cacttcggca
    19321 gtgcaccgtc tccggtcgcg ttccagcaga tcgatggaaa gctgcaactg gtgaacctgg
    19381 agtacggcct gcccagcgcg ctgcaggtgc gcgatcgtgg ccgcacggtt gaggtggatg
    19441 gcacggtcta catcctgcag gcccccgcgc agtgcaccgc ggccgccacg ccggctgaag
    19501 gcagttgcct tgccgatgcc gcggcgtgcc tggacaatcg tcgcgaagcg aatccagccg
    19561 cgctggaagc aggatgccgg gaaggcgtgc ccggcatgtg cctgcaactg gctgatcgtt
    19621 ggcacgatga agccaaaccc acggtcgagg tcgatcctgc cctggcaaag gcagccctcg
    19681 acgccgcctt gtccggcatc aagctccccg tcgcctgtga cgatggtggc ttcgaacagg
    19741 gaaccccggc gtgtgccgcc gcgctcgagg ccgaccccgc agtgcaggag cagctggtca
    19801 aggccgcgat gacggccgcc atgaccgaag cgatggtgac gatgacggcg ccgaccgtgc
    19861 cggtgatcat tccgactgag cggcggcaac agttgttgcg gctgtgccgc gaggtaccgc
    19921 atggcggctt ctgcacccgg gtggctgaac tgtcctggga ggcgggagat ccccagcagg
    19981 cggtacaggc cctggctgcg gcctgcatac ccggcaatga caccaccacc tgcgagcgcc
    20041 tgccggcgtt gcaggcggtg ggcgcatcgt tgcagccgca accggcaacg gccttgccct
    20101 gcggcagcta ccgggccgac ggcggcctga tggacacgct ggacttcggc gatgccggcc
    20161 tggttggcgt gggctggagc agccatcttc gcgcacgcgt cgaagagggc gacatccgca
    20221 tccgccacga ccggggcggc gacttcgtgc tgcgcccgct gcctggcggc caactgctgg
    20281 gcctggacac ctggacccgc ttccaggtgt tcgtccccac tggcgagggc tcgagccgct
    20341 gcagtgcacc gaagcagttc aaggtgctgc cactgccaca ggattgcccg ctggcgttgg
    20401 ccaacgagga cggggccgaa gcctgctgcg cacagggcaa gctgcagggc tgcaacattc
    20461 tcggcaaccg cctagcgctg tccgggaact ggttgcaggc cgccgagcac tacaccacgg
    20521 tctgccgcgc tggcgtccgc gagggctgcg agaacctggt caccgctcag ggcaacggtg
    20581 cggatgtgga cgcacgggca accctggagc agctgtgcaa ggccgaccgc agcggcctgc
    20641 atgtggcctg cgacgtactc ggcacccaga actgggagct gatcacgctg ggtggtgccc
    20701 tgcagaaggc ggttgacgag gcggccgtgg acgacgctcc ggcgccgcgc aactccaacc
    20761 gcaagcgctg agcccgccag ggcctgtccg cagcttcggg cgggccctgc ggtaaagtac
    20821 gcgccatgaa cgaattcgag cgcgtgcgcg cctacctcac cgacctgcag gaccgcatct
    20881 gcgcggcgat cgaggccgtc gatggccagg cccgcttcca ggaagacctg tggcagcgga
    20941 ccgagggcgg cggtgggcgt acccgcgtgc tgcgcgatgg tgcggtgttc gaacaggccg
    21001 gcatcggctt ctccgacgtg gctggcagcc gcctgccgcc gtcggcctcg gccaaccgcc
    21061 cggaactggc tggcgcctcc tggcgcgcca ccggcgtgtc gctggtgttc cacccgctca
    21121 atccctacgt gccaaccacc cacgccaacg tgcgcttctt ccaggcgcag cgcgacggcg
    21181 aagtggtggc cagctggttc ggcggcggct tcgacctgac ccccttctat ccgttcgacg
    21241 aggacgtgca gcactggcac cgggtcgcac gcgatctgtg cacacccttc ggcgaggaac
    21301 gctacgccgc gcacaagcgt tggtgcgatg agtacttctt cctgcgccac cgcaacgaaa
    21361 cacgcggcgt cggcggcctg ttcttcgacg acctgcacgg cgatttcgag cgcgatttcg
    21421 actatctgcg tgcggtcggc gatggcttcc tggatgccta cctgccgatc gtgcagcagc
    21481 gaaaggacac cgcctacggc gagcgcgaac gcgagttcca gctgtaccgt cgcggccgct
    21541 atgtggagtt caacctggtc tatgaccgcg gcaccctgtt cgggctgcag agcggtggcc
    21601 gcagcgaaag catcctgatg agcctgccgc cgcgggtgcg ttgggaatac ggcttcaacc
    21661 cggacgccgg cagtgccgag gcacgcctgg ctgattacct ggtgccgcgc gactggctct
    21721 gagcttccgg caccacgcct gacgcgtggt gccatcccca cgcctgcggt gcgtcgtgca
    21781 ccggacaggt cgtgttcttt cttcttcaag gatgatgtca tgcctgctgt tgttgccctc
    21841 cgcccccgcg ctgcgggttg gcgctccctg ctgctgctcg tgctggcctc ggccagcctg
    21901 ccggccgccg cgcaatcgat ggcttgcggc acctacaagg acagcagcgg caacaccacg
    21961 ctgaccctcg aaagcgaggg ccgcggcttc ctgtccggcc cctaccaggc caccgaggaa
    22021 ctgcgcatcg cccgccagga cgacgtgctc ggcaccggca acctgtccac gggccgcctg
    22081 gagaactggt acttctccga caacgaccgc acccttagca ccccgtaccg cgagttcacc
    22141 cgtgagcgct ccgccgcatg caaggtgatg ccagagccca tcgaagacgg ctgcgtgatg
    22201 aacacctccg agtgcctgga ggccttgccg gaagccgagc cgcagaagct gcatgcctgg
    22261 tgcgccgagg gcgtgggcgc cgcctgcatg cgcctgctgg aaacctacca gcagcaggcc
    22321 aaggacgctt cgccgagcac agcggagccg ccgatgcccg agatctgcaa ggaggagtca
    22381 ccgtcgttcg atgccgaggg ctgcacgacg gtggccaggc aggtcgcctc ggaaatgatg
    22441 ggcaaggccc tgctcggcct gcagcattcg gtggatgcgc cgctgccgcc ggcacagctg
    22501 gatgaactga tcgccctgtg ccgcgtgcag cagggcgaaa cgttctgcgc cgacaccgcc
    22561 gagaccttgt ggagcagtgg ccgcctgcag caggcccgcg aggcgctgca gctgtcgtgt
    22621 gcgcagcgcg cggatgcccc ggcctgcggt ccggccaagg acctcggcgt gttggccagc
    22681 gctcccggca cggcgctggc accggtcacg gccagcgcgc tgccctgcgg cagctttgaa
    22741 gccgaacgca gcgtgctgtc gcagctgcgc ttcctccagg atggcgtggt cgaagccggg
    22801 ggccgcgagc agccactacg cgccagcctg cgcgacggcc gcatcctcat ccatcgcgaa
    22861 ctcggcagcg acttcgtgct gcagctgctg cagaatggca acctggccgg tatcgacggt
    22921 ggcaaccgct tcgcctacta cgagcgcaag cctgcggcgg gcaacgaccg ctgcacgcca
    22981 tgaccggggc tgggtagcac cggtcccccg cccggctgat gcaccgtgca gccgggccca
    23041 ggctcggcgc taccaggtca ggtgctcttc ctggggatga tggtgatgtg cccgttgatc
    23101 tccagcaggg ccagttcgac atcctcaaca cccaggcagc cctgctggcg catggccgcc
    23161 tcgaaatcgg cgcgggtgac ctgctcgcga cgcagcacgg tgtcgaacag gcgcccatcg
    23221 cgcgcgatca ccaccggctc tccctccacc aggcgctcga tccggcggtt gcgggtactg
    23281 acccagccca ccccgtagtt gagcaggatc agggtcgccg ccagcagcag gccgccgccc
    23341 agcgaggtgt cggtgcccag cagggcgttc tgtacggcat tgcccagcag cacgatcagc
    23401 agcacgtcga acggggtgat ctgccccagc gcgcgcttgc cgctgagccg gaccatgccc
    23461 agcactacga catagaccac caccgcgcgc aggatgaact cccaccacgg catcgccagt
    23521 gcgaacagat cgggcatcgt tttcccctgc ggagcggtgg cccagcgtgg cgcagacgat
    23581 tgcgtctggc aacggcacaa ataaaaagcc ccgctgacca gggggaggtc aacggggccg
    23641 gggaacgggc acttggggag gagtccccgt tccgagatct gctccagggg atgggagaga
    23701 tccacaacag gcattgcgcc tgtcgggagt tatagaagca ctccgaacac taacggttcg
    23761 tgaaggggcc caatttaatg aacttcaatc gggggaacat tcatgatcga gtcagaaacc
    23821 cccgactgat gaacaaattc acgtcgtttt cggcctgaaa cgccgtcagt gcgcctcgtc
    23881 ccagttgctg ccgataccgg tatcgaccac cagcggcacc cgcagtttgg ccgcttgcga
    23941 catgcgttcc accacctgca aacgcaagtc ttcaacgaaa ctgctttcgg tttcgaacac
    24001 cagttcatcg tgcacctgca ggatcatccg tgccggtgcg ccgctgtcac gcagccactg
    24061 gtccacgtcc accatcgcgc gcttgatgat gtcggcggcg gtgccctgca tcggcgcgtt
    24121 gatcgccgcg cgttcagccc ccgcgcgcag gccctggttg cgggcatgaa tgtcgttcag
    24181 gtacaggcgg cggccgaaca gggtttccac gtagccctgg tcgcgggcct gctggcgcat
    24241 ccgctccatg aagtcgcgca cgcccgggta gcggctgaag tacagcgcca cgtagtcctg
    24301 cgcctggcca cggtcgatgc ccaggttgcg ggccaggccg aacgcgctca tgccgtacat
    24361 caggccgaag ttgatggcct tggcggcacg gcgctcgttc ggggtcacct cctccagcgt
    24421 gcgcccgaac acctcggcag cggtggcacg gtgcacgtcg gcgccctgtt cgaaggcgag
    24481 caccaggccc gggtcctcgg acaggtgggc catgatccgc agctcgatct gcgaatagtc
    24541 ggccgccagc agctggcagc cctccggcgc cacgaacgcg cggcggatgc ggcggccgtc
    24601 ctcggtgcgg atcgggatgt tctgcaggtt cgggtccgat gaggacaggc ggccggtggc
    24661 ggcaccggac tggtggtagc tggtgtgcac gcggccggtg tccgggttga ccatctccgg
    24721 cagcttgtcg gtgtaggtgc tgcgcagctt ggccaggccg cggtactcca ggatcacccg
    24781 cggcagctcg tgctgctcgg caatcgcctc cagcgcctct tcattggtgc tgggctggcc
    24841 cttgggggtc ttcaccaccg ccggcagctt cagctcatcg aacagcaccg cctgcagctg
    24901 cttgggcgaa tccaggttga agctgcgccc ggccagctcg gtggccttct gctgcgcggc
    24961 cagcatgcgc gaggacaggt cctggctctg ccggcgcagt tcgtcggtgt cgatccgcac
    25021 gccattggct tcgatgctgg ccagcaccgg caccagcggc atctcgatgt cgcggtacac
    25081 gctgtccagc gccggctcgg ccagcagctg cggctgcagc gcgtggtgca ggcgcagggt
    25141 gatgtcggcg tcctcggccg catagcggct ggcttcgtcg atgcccacct gcgagaacgg
    25201 aatctgcttg gcgcccttgc cggccacgtc ctcgaacttg atggtgctgt agcccaggta
    25261 gcgcagggcc agcgagtcca tgtcgtggcg ggtggcggtg gagttgagca cgaagctctc
    25321 gagcatggtg tcgtcgtggt agccctgcac gtccacgccg tggcggcgca gcacatgcag
    25381 gtcgtacttg ccgtgctggc ccagcttctt cttcgccggg tcctgcagca ccgggcgcag
    25441 cgcgtccagc acctgctgca tcggcagctg ggccggcgca cccgggtagt cgtggccgac
    25501 cggaatgtag gcggccctgc ccggctcgac ggccaggctg acgccgacca ggcgcgcacg
    25561 catcgcgtcc agcgcatcgg tctcggtatc gaagctgatc aggtcggcct gctgcaggcg
    25621 ctcgacccag gcctgcagct gttcgctggt cagcaccgtc tcgtattcac cgggcgcggc
    25681 cagcgccggg tccagcgtac cggcggccgg cgcttcggcg ctgccacggg cgaagccggc
    25741 ggcggtaccg cgcaggctcg gggtggcctc actggcagcg gtgggcgccg gcagcggtgc
    25801 tcccagttcc ttcagcgcct gggtgaagcc gtagcgcgta tacagctcgg tcagctccgg
    25861 cacgtcctgc tcgcgcaggg ccagcgtggt cggtctggcg tccagcgcca cgtcggtgcg
    25921 gatggtcacc agctcgcggt tcagcggcag ccgctccagc gcggcgcgca ggttctcgcc
    25981 gatcttgccc ttcatggtcg gcgcggccgc catcaccccg tccaggtgct ggtactcggc
    26041 cagccacttg gcagcggtct tcggcccgca cttctccacg cccggcacgt tgtcgacggt
    26101 gtcacccatc agcgccagca ggtcgatgat ctggtcggca cgcacgccga acttgtccat
    26161 cactgccgcg tccgaatcca tgcggctgcc ggtcatggta ttgaccagct cgatgcccgg
    26221 acgcaccagc tgggcgaagt ccttgtcgcc ggtggaaatg gtcaccttca ggtcctgcgc
    26281 caggccctgc agggccagcg tgccgatcac atcgtcggct tccacgccgg ggatgcgcag
    26341 gatgctgatg cccagcgcct cgacgatgcg gcacatcggc tcgacctggc tgcgcagctc
    26401 gtcgggcatc ggcggccggt tggccttgta ctggtcgtac agatcgtcgc ggaaggtctt
    26461 gccgggcgca tcgaccacga acgcaacgta ggccgggcgt tccttcagtg tcgagcgcag
    26521 catgttgacc acgccgaaca gcgcgccggt gggttcaccc tgtgcattgg acaggggcgg
    26581 cagcgcgtgg aacgcgcggt acaggtaact ggacccgtcg atcaggacta atctgctcat
    26641 gcgccgattc tacgcgcccg tgcctgcacc gcgacgacac ggcacgcacc cggcgatggg
    26701 gcataatcag ggctctatcc aggcaaaggc ccccgccgat gaagaccctg atgctggctt
    26761 ccgtgctcct gctcgctggc tgcgccagca tgggtggcgc aggtgctccc ccggtggacg
    26821 tcaagggcgc cgatgtctcc aagcgcacca tggacaacgg tgacaccatc gaggaatacc
    26881 gcgtgtccgg ccagctgcgc atggtcaagg tgaccccgtc gcgcggcgcg ccgtactaca
    26941 tgtacgacaa gaacggcgac ggccgtttcg acaacgacaa ggacggcgtg tcgccggtgt
    27001 actggaagct gtacagctgg tgatgtgacc ggcatcgaac cgggcggagt ggcagcactc
    27061 cgcccatgtt caacgggcta ctgcacgcaa cccgccgcgt caccgtcgca ggcccgcgcc
    27121 gtccccgcag gcaaccggat tccagggtac gtgatgccga tcgcacgctg ctcaacggct
    27181 gctgccgccg catcgacata gacagcccgc ggcagcaccg cgccctgtgc gagcactcca
    27241 ggacgcatcg cttcgggatc aggtccatcg cccaccacga gaggtcggcc atctgtgccc
    27301 acggcatgga aataggccgg cgggcgtccg atgaaatcga tcgtgtgcgt tctgccggcg
    27361 ctggtcagat agatcggcag cggctgggtg ccgatgccac cgctggacca ccaatggctg
    27421 tcaccggcca gcaccggcgt ggtacccagc tggcggatgt caccgccctg caccttcagg
    27481 tggaacccgt tgttgccggc atcgacgctg aatgcgctgc cgttgagcga ggcgagggtc
    27541 agggtaccgg cgttggtcag gctgaagcct gccggcgact ggaaatcacc gagggtgccg
    27601 atggcattgg ccacgaacag tgaggcatcg cccagcatcg tcgggccggc cgcgcgtcca
    27661 ctgagctggt cagccagcag gcggccaccg gcaccggcgc ggatcgcacc ggacgactgc
    27721 agccgcagcc cgcccgcctg cacactgcca tcgagcagca gatcaccacc gcgcacgtcg
    27781 agcaggccct gtgcgccggc ctgcacgttg ccggtcacct gcagcccctg catggttttc
    27841 aactccaggc cctggctgcc gaagtcaccg agcgtggcga tacggttgtc gccgcgcagg
    27901 ctggccttgc cgccggcact gccctgcagg cgttgtgcgg ccagcacacc cccggtctgg
    27961 gtcagcgtgc caccacttgc gagctgcagt acccccgcag ccagtacatc ctggccgagc
    28021 tgcaggtcct ggccgctgcg cagggtgatg ttgttgccgc gcagcgccgc cggcaaccgc
    28081 aatgcgccgc cggcctgcag ctgcaggtca ccgttgccgg tatcgattgc gccgctgggc
    28141 agatccagtg cgcccccggc ctgcaggcga accgccgcgc tgtggctgtc gagcaaatcg
    28201 atgcgcaggt cgcccgcact ggccagatcg atgcccgcgc cagccagcga catcgggccg
    28261 cgcaggtcgt tgccagccaa tcccagtgca atcgatgcgt tgctgcgcag gttggtgctg
    28321 ccatccacgc gcagcgtgcc gtgctgatcg atgccgttgc tgcccaccgc ctgcaggtta
    28381 ccgcccacgc gggtcgtgcc gaagtgcagt tgctggccct gcagggtcac atcgccggcg
    28441 acattggccg tcgacaaggt caggcgtcct gcactgcgtg cagccaggcc gtccgccgtc
    28501 acgccctgca ggtgcagcgg gccatcgctg gccagtgcca cctgccggcc ctgcaccgtg
    28561 accgcatcgc cgaagcggtt gccaccggcc tgcagggcga tgtcaccgcc agcgctcagc
    28621 cgggtcgtgc ccaccacctg cgcggcaccc tgctggcgga tgtcgccggc gctggccagc
    28681 gacagctggc cgctcgcggc cacattgccc agcagcagcg tgtcggcggc tacgttgata
    28741 tcaccaccgg acaggttgag cgcgccgccg aaacggttgc cggcattgcc cagcgcgatg
    28801 cgcccgctgc ctgcatcaac ctgcactgcg ccgaccgact gcacgctgcc acccacgcca
    28861 ttgggcacgg cgacctgcac gatgtccgcg ttgctgctgg ccagggtcag cgaaccgctg
    28921 ctgcgcagat cggcccccag gcgcacgcca tcgcggccga acacgctcac gttgttgccg
    28981 gccagca
//
LOCUS       DAOKIP010000031        28398 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.031,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000031 DAOKIP010000000
VERSION     DAOKIP010000031.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 28398)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 28398)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..28398
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.031"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            165..1604
                     /locus_tag="QEL58_001202"
     CDS             165..1604
                     /locus_tag="QEL58_001202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005417504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II fumarate hydratase"
                     /protein_id="HDS1675698.1"
                     /translation="MSKAASKGATPGFRIEHDSMGELQVPADALWGAQTQRAVQNFPV
                     SGQRMPRGFIRALGLVKGAAAGVNAELGHLPKTVAKAIQVAAAEVAAGDWDAHFPIDV
                     YQTGSGTSSNMNANEVIATLANRAGKAGKTTVHPNDHVNQGQSSNDVIPTALRVSAVL
                     AAHEQLLPALVHLRKTLDKKGRSLRKVVKTGRTHLMDAMPLTFEQEFGAWSAQLASAQ
                     ERIEDSLKRVRRLPLGGTAIGTGINADPRFGAQVAKALKQQTSFKFDSAENKFEGLAA
                     QDDAVELSGQLNALAVALIKIANDLRWMNAGPLAGLGEIELPALQPGSSIMPGKVNPV
                     IPEATVMACAQVIGHHTAITVAGQTGNFQLNVTLPLIAVNLLDGIGLLANVSTLLADS
                     AIAGLKVREDRVAEALARNPILVTALNPIIGYEKAAAIAKRAYKEQRPVLDVALEDSG
                     LDEAELRRLLDPTALTAGGIQAGGGGAGG"
     gene            complement(1675..2100)
                     /locus_tag="QEL58_001203"
     CDS             complement(1675..2100)
                     /locus_tag="QEL58_001203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005413932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675699.1"
                     /translation="MKKLFLLLAALLCLGLVGCDKDYRNHRAERGKPKISVSEGMVTV
                     RRPPAPNIIILGDGTMKVDEIQIPLDDAQKQMLQTMFGKLQVLRQNTLVAAPADPNMQ
                     PVKIQPPEGMEVIPADLIQRIPEFKDYTDTFGNIVADRR"
     gene            complement(2201..2812)
                     /locus_tag="QEL58_001204"
     CDS             complement(2201..2812)
                     /locus_tag="QEL58_001204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2884 family protein"
                     /protein_id="HDS1675700.1"
                     /translation="MKLSRLLPATLLCLPLIACGGTSSSPDKTVGKSVAEATSGVGDT
                     VKQAIDDARKEITEGNIKISSANQPRAEITPDGHLLIGGKDVPLDAGQRRHLQAYRSQ
                     VVAVAADGMEIGVAGAKLGTDAAGEALKGIFSGDTDGLEKRVNAQAAKIEAQAKRICE
                     RLPAMLASQQALARELPAFKPYATMDQSDVDDCGKNNGATFSR"
     gene            complement(2842..3729)
                     /locus_tag="QEL58_001205"
     CDS             complement(2842..3729)
                     /locus_tag="QEL58_001205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2807 domain-containing protein"
                     /protein_id="HDS1675701.1"
                     /translation="MRSLLACSALLLLPLSALAADAPNCKFTAARTLKLDVAGARAVV
                     FEVNQHDLKIVASKGGGQLDGRACASSQEWLDQLVLDQRKEGDKLVVSLRREGRNSGI
                     SLGNSYAWLDIRGSVPDNLPLQLKVGSGDASVENAQSLSVDVGSGDAVARGTRGDIHA
                     AVGSGDLNIDGGGSLNLLSLGSGDVNVRNISGNASTGTVGSGDLKISDVRGNARLDTV
                     GSGDIEFKRVQGSVEVGVVGSGGVDLADIGGDVHVRSHGSGDIQVNGVRGSLTVDHSG
                     SGDVEHRNVSGRVTLPRGK"
     gene            complement(3755..4783)
                     /locus_tag="QEL58_001206"
     CDS             complement(3755..4783)
                     /locus_tag="QEL58_001206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-2 transporter permease"
                     /protein_id="HDS1675702.1"
                     /translation="MNAVNHPVSPLGTLRWLLKREYWENRGGFLYAPLIAGLISLVMS
                     SIGIAFGLFALNRAARSGGLHVDGESVNVNGLDLALLTRNINGKDLADLGNGLDLTLV
                     LSSAWPFLVLAFVVFFYCLGALYDDRRDRSILFWKSLPLSDTQTVLSKVISALIIAPL
                     IAVIAGIITMFGFMLVISLVALAHGGSPMTLIWGPASPLTLAAGHLAWIPVYALWALP
                     TAGWLLLCSAWARTKPFLWAVMLPLFAGVIISTTKVMPLIGLTTGWFWQNIVGRLLLG
                     AVPGMDLVYRLSAGEGSRRDLESVVGLMSPASQLKSLAMPELWIGAAVGAVFIFLAIR
                     LRKRAGEI"
     gene            complement(4780..5655)
                     /locus_tag="QEL58_001207"
     CDS             complement(4780..5655)
                     /locus_tag="QEL58_001207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005913764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDS1675703.1"
                     /translation="MNSTASESVITARGLRKAYKTTVALDNASFSIPSGRIVGLIGPN
                     GAGKTTALKAILGLTSVEGELNVLGRDPRLHRDELMNDICFIADVAVLPRWLKVREAI
                     DFVAGVHPRFDRARCERFLANTKLQPKQRVRELSKGMIVQLHLALVMAIDARILVLDE
                     PTLGLDILYRKEFYQRLLEDYFDEQKTIIVTTHQVEEIEHILSDVMFIRDGRIVLDAE
                     MDDVGQRYTELLVNADQLETARALKPIDERSLAFGKTVMLFDGVPRDQLSTLGETRIP
                     GLADLFVAIMKGTYA"
     gene            complement(5655..6014)
                     /locus_tag="QEL58_001208"
     CDS             complement(5655..6014)
                     /locus_tag="QEL58_001208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HDS1675704.1"
                     /translation="MSDIQWSDGAPIYRQLKERVIAMMLDGILKPGDALPSVRQVAAD
                     YQLNPITVSRAYQELADEGLVEKRRGLGMFMTEQAATQLRSSERDRFLNEEWPAVLER
                     IQRLGLSLDELLPQGKV"
     gene            6630..7217
                     /locus_tag="QEL58_001209"
     CDS             6630..7217
                     /locus_tag="QEL58_001209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012511571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione peroxidase"
                     /protein_id="HDS1675705.1"
                     /translation="MPLSTVSPRRMRGLSLLVLIVAGVAGSASALAADLLDLEYRPLA
                     SKQQVNLQQRYHGQVLLVVNTASKCGYTPQYEGLEALQKRYAGRGFAVLGFPSNDFKG
                     QEPGDEKQIQDFCTLTYGVKFPMFEKVHVVGAEATPLYQRLTAATGVAPGWNFHKYLV
                     GRDGKVIAQFASKVTPDDPQLTAAIDKALAAAATH"
     gene            7314..8291
                     /locus_tag="QEL58_001210"
     CDS             7314..8291
                     /locus_tag="QEL58_001210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015463036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HDS1675706.1"
                     /translation="MKMGMRGAAASVLILAMGTSGVALSQQPAAPAAAKETATLNSPK
                     QKLGYAIGLDVAKSFTPIADEIDVAALRTAVERSFEGLQPQITQEQAKATDAALRQVV
                     MARSGQQVPGVAPGSQPPKVDRVKVSQMIGSYSVGPSLAQLKDDIDVASLFDAISTGL
                     NKGQPKMTEADATATIQAFMGSKQAEMQAKAAAAAQTNREEGNAFLAKNKTQPGVVTT
                     ASGLQYQVIRPGSGERPLPSSKVRVNYEGKLLNGTVFDSSYGRQPAEFGLDQVIKGWT
                     EGVALMPVGSKYRFWIPGNLAYGENGTPGGPIGPNATLTFDVELLGVLP"
     gene            8315..9664
                     /locus_tag="QEL58_001211"
     CDS             8315..9664
                     /locus_tag="QEL58_001211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010480421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose/GDP-mannose dehydrogenase family
                     protein"
                     /protein_id="HDS1675707.1"
                     /translation="MRVAIFGTGYVGLVTGTCLADVGHQVVCVDIDQAKVDGLNRGII
                     PIYEPGLEPMVKANHAASRLAFTTDAAAAIEHGQVVFIAVGTPPDEDGSADLQYVLAV
                     ARTIGRHMSVPTVVVNKSTVPVGTADKVRAAIAEELAARGADIAFDVVSNPEFLKEGD
                     AVADCMRPDRIIIGATSEESVAVMRRLYAPFNRNHDRVVEMDVRSAELTKYAANAMLA
                     TKISFMNEIANIAERVGADVEQVRQGIGSDPRIGWHFIYPGAGYGGSCFPKDVQALAR
                     TAQQHGLEPKLLNAVEAVNESQKGHLFALIQRHYDRGEDEGVRGKTFAVWGLAFKPNT
                     DDMREASSRRLLAQLWEGGATVRAYDPEAMHESQRIFGERDDLVFCSSADDALQGADA
                     LVVVTEWKQFRSPDFQKLREQLKDAAVFDGRNLYDPAEVEAAGLAYYGIGRGRSLHV"
     gene            9657..9899
                     /locus_tag="QEL58_001212"
     CDS             9657..9899
                     /locus_tag="QEL58_001212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011036690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SlyX family protein"
                     /protein_id="HDS1675708.1"
                     /translation="MSDLLPTEREQALEARLVELEMRVSFQEQALAELSDALADARMQ
                     GMRNADVLRVLLEDLGKVRNALNSSDPASEPPPPHY"
     gene            9910..10590
                     /locus_tag="QEL58_001213"
     CDS             9910..10590
                     /locus_tag="QEL58_001213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2058 family protein"
                     /protein_id="HDS1675709.1"
                     /translation="MSDTLRDQLMGLGFKPAPKPERKNDGPRRDGRPQGKGGNGNGKP
                     QGAGKGEHKPGERRGHGHGGAGKPGPSRGPGQQGPRKPRSAEEMDLAKAYAIRAQKEK
                     EERIETERLKQEEARVRREAKAKLEELLKDKSLNAEAADIARHFPYGGKIKRIYVTAE
                     QLTALNAGELGVVQLNGRYLLVTAEVLAQSEAVFAASVALKVDPNAPAEEDPYADPQY
                     QVPDDLVW"
     gene            complement(10639..11826)
                     /locus_tag="QEL58_001214"
     CDS             complement(10639..11826)
                     /locus_tag="QEL58_001214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDS1675710.1"
                     /translation="MTVPVARLSSFYLFYYAALGAFTPYWSLFLTARGMSVTAISVMM
                     GLWYATRVVAPSTWTSLAAASPRPIRLLRIGCVLTLLSFAAFLLPLPQPWMYPAMVVF
                     CFFYNAVMPQFESITLTHLGSDSHRYGLIRVWGSLGFIAIVTLFGWLIEGDGSASRAG
                     LLPWMMLPLFVLLVASAFSNQYARGIGKAAGDASGFWQIVRRPPVLAFFLAAFMEQLS
                     FGPYYTFFSVYMDHHGYRTSTLGLLWTVGVVFEVGVFFTIGRFFRRYDASWMLLIALV
                     SSCLRWAVTALFPENLPVMLVAQSAHALGFAAFFAAAMQMLATYFPGRLNGHGQGLLY
                     GFSSGVGGVLGALIAGQLWKIDDGRTAFLAGSGFALVGALLCFFALSLPLIRARRSAV
                     HAP"
     gene            complement(11913..14597)
                     /gene="metH"
                     /locus_tag="QEL58_001215"
     CDS             complement(11913..14597)
                     /gene="metH"
                     /locus_tag="QEL58_001215"
                     /EC_number="2.1.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017160303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine synthase"
                     /protein_id="HDS1675711.1"
                     /translation="MSTPSYTRLSGLEPLVITPDLLFINVGERTNVTGSAQFRKLIKE
                     GRYEEAVDVARQQVASGAQILDVNMDEGLIDSEAAMTRYLNLIMSEPDIARIPVMVDS
                     SKWSVIEAGLKCLQGKSVVNSISLKEGEALFREHARKVLRYGAAAVVMAFDESGQADT
                     CARKVEICTRAYRILVDEIGFPPQDIIFDPNIFAVATGIEEHDNYAVDFIEATRIIKQ
                     TLPHCHVSGGVSNVSFSFRGNETVRQAIHSVFLYHAIAAGMDMGIVNAGAMPIYDELE
                     PDLRERVEDVILNRRSDATERLLEIAERYKGRKGAAKTEDLTWREKPVAQRLAHALVH
                     GLDAFVEEDTELARQASSRPLDVIEGPLMDGMNIVGDLFGAGKMFLPQVVKSARVMKK
                     AVAYLLPYIEAEKARSGDSAKSNGRIIMATVKGDVHDIGKNIVGVVLACNNFEVIDLG
                     VMVPAQKILDAAREHHADIIGLSGLITPSLEEMSHVAREMQRQGFDLPLLIGGATTSR
                     AHTALKIDPHYQAPTIWVKDASRAVGVAQSLISRDLREAFVAANEADYAEIRARHRNR
                     GDAKRLVSLEHARGQKFQGGWDTYTPPVPNQPGLHVFDDYPLAELVDYIDWTPFFQAW
                     ELAGKFPAILTDEIVGTQASELYQDARAMLDRIVGEKWLTAKAVFGLWPANSIGDDVR
                     VQHPQGETTLHFLRQQVDKPAERPDFCLADFIAPADSGKQDWIGAFAVTAGIGIDAHV
                     ARFEAEHDDYNAILLKALADRFAEALAERLHQRVRTEFWGHERAETLDNEALIDEQYR
                     GIRPAPGYPACPEHSEKRRLFDLLQAEDNAGMELTESFAMLPTAAVSGYYFSHPQSQY
                     FVVGRLSREQVGDYARRKGVDRAQAERWLASNLDYDPE"
     gene            complement(14594..15688)
                     /locus_tag="QEL58_001216"
     CDS             complement(14594..15688)
                     /locus_tag="QEL58_001216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010480431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homocysteine S-methyltransferase family protein"
                     /protein_id="HDS1675712.1"
                     /translation="MSALPWLHPDRANALLDALRERILIIDGAMGTMIQRHGLQEDDY
                     RGERFAGGYDHAHGPGCDHGAPEGHDLKGNNDLLLLTRPQVIADIHTAYLEAGADLVE
                     TNTFNATSVSQADYHLQHLVYELNKAGAAVARACCDAVEATTPDKPRFVIGVIGPTSR
                     TASISPDVNDPGFRNTSFDELRDTYREAIEGLIDGGADTLMIETIFDTLNAKAALYAL
                     EEAFDARGARLPVMISGTITDASGRTLSGQTAEAFHASLAHARPLSIGLNCALGAAAM
                     RPHVETLSQVAGCHVSAHPNAGLPNAFGEYDETPEEMAATLRGFAEDGLLNLVGGCCG
                     STPDHIRAIAEAVAGLPPRALPGSQEQQAA"
     gene            complement(15701..16630)
                     /locus_tag="QEL58_001217"
     CDS             complement(15701..16630)
                     /locus_tag="QEL58_001217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006376775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HDS1675713.1"
                     /translation="MDLEDWSTRLKVFADATRVRLLALLEQEELTVAELSAITRLAQP
                     RVSTHLARLKEAGLVRDRRAGVSAYYRFDEAQLDPAQRALWHALSNGSDDPLLRQDAE
                     RVAAVLAHRAADQNWADSVAGDMERHYSPGRTWEALARTALPLLETGDVLDIASGDGV
                     LAELVAPHAKRYICIDTSARVVAAASERLRRLPNVEVREGDMHALPFKDGSFDLVVLM
                     HALTYASKPAQAVTEAARVLRSGGRLLLCSLARHEHKAAVEAYGHVNLGFSDKELRKF
                     VDKAGLQVSSLETVTREKRPPHFEVISLIANKP"
     gene            16784..17932
                     /locus_tag="QEL58_001218"
     CDS             16784..17932
                     /locus_tag="QEL58_001218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HDS1675714.1"
                     /translation="MDFSFTEEQLMLQDVARRIAQEKIAPSAEHHDRTGEFPLDNIRL
                     LGENGLMGIEVPTEYGGAGMDPVAYVLAMVEVAAADAAHSTIMSVNNSLFCNGILTHG
                     TEAQKQTYVRAIAEGEAIGAFALTEPQSGSDATAMRCRAVKQADGSFVINGKKSWITS
                     GPVAKYIVLFAMSEPDKGARGITAFIIDTDKAGFGRGKTEPKLGIRASATCEIEFNDY
                     VAAAEDVLGQEGEGFKIAMSVLDAGRIGIASQAIGIARAAYEATLEYVKERKAFGAAI
                     GTFQMTQAKIADMKCKLDAALLLTLRAAWVKGQGKRFSTEAAVAKLTASEAAMWITHQ
                     AVQIHGGMGYSKEMPLERYFRDAKITEIYEGTSEIQRLVIARNETGLR"
     gene            complement(18066..21239)
                     /locus_tag="QEL58_001219"
     CDS             complement(18066..21239)
                     /locus_tag="QEL58_001219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005997967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit"
                     /protein_id="HDS1675715.1"
                     /translation="MPKFFIEHPVFAWVVAILISLSGVIAILNLGVESYPNIAPPQVT
                     VSATYPGASADTTEKSVTQVIEQQLTGIDHLLYFSSSSSSNGRAQITLTFETGTDPDI
                     AQVQVQNKVSLATPRLPSEVTQQGVVVAKANAGFLMVVALQSDTPTINRDALNDIVGS
                     RVLDQVSRIPGVGSTQQFGSEYAMNIWLNPEKMQGYGLSASQVLAAVRAQNVQFAAGA
                     LGSDPSPEGQHFTATVSAEGRFSSPQEFENIILRANADGSRVLLKDIARVAFGANNYG
                     FDTQYNGKPTGAFAIQLLPGANALNVAEAVRGKMDELQPSFPSGVTWFSPYDSTTFVK
                     ISIQEVVKTLFEAVLLVFLVMLIFLQNFRATLIPTLVIPVALLGTFLGMWMIGFTINQ
                     LTLFAMVLAIGIVVDDAIVVIENVERIMSEEGLAPKPATQKAMTQITGAVVAITVVLA
                     AVFIPSALQGGAAGEIYKQFALTIAISMAFSAFLALGFTPALCATFLKPTHNDNPNII
                     YRTFNKYYDKISHTYVGHITSAVRHAPRWMILFVVLTALCGFLFTRMPGSFLPEEDQG
                     YALAIVQLPPGSTKGQTNEVFAQMRGILDKQDGYEGMLQVAGFSFVGSGENVGMGFIR
                     LKPWEERKFTAPEFIQNMNGAFYGIKEAQIFVVNLPTVQGLGQFGGFDMWLQDRSGAG
                     YEQLTQARNILLGNAAQKPEALVGVRPNGLENAPQLQLHVDRVQAQSMGMSVSDVYST
                     IQLMLAPVYVNDFFYEGRIKRVTMQADGPYRTGQESLKSFYSPSSLTTNADGTNAMIP
                     LNTVVKSEWVSASPSLSRYNGYSAINIVGSQAPGTSSGEAMQTMEAIVNDDLPAGFGY
                     DWSGMSYQEILAGNAATLLLVLSIVVVFLCLAALYESWSIPVAVLLVVPLGVLGALGL
                     SMLRGLPNDLFFKIGLITVIGLAAKNAILIVEFAVEQRAAGKNLRDATIEAARLRFRP
                     ILMTSFAFIMGVIPMAISTGAGANSRHAIGTGVIGGMLFATLLGLLMIPVFFVVVRRM
                     LGDKLDEPSKEFMERQRDAESAHRPDR"
     gene            complement(21255..22523)
                     /locus_tag="QEL58_001220"
     CDS             complement(21255..22523)
                     /locus_tag="QEL58_001220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014647677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HDS1675716.1"
                     /translation="MTAPLRTLALTCAVAVALAACKKPEQQTPPPPEVGVIDAKPQTL
                     PLQRELVGRLSPFRSADVRARVPGVLLKRVYQEGSQVKQGQTLFLIDPAPLRASLNAS
                     EAQLASARATYANAKVAADRARSLAPQQFVSKSDLDNAESAERTALAAVKQAEAALTS
                     SRINLGYTEVTAPISGVANKQQVTEGALVGQGDVTLLTTVDQLDPLYVNFSLSVDELT
                     QLRAQQAKGALALSGDGKATVSVKLADGTTYSEPGTLDFSSTTVDPATGAVSLRALLP
                     NPQQILLPGAFVSFQANLGERNNAYLVPQQALLRDTTGGYVMVVGTDGKVVRKNVKTD
                     GAQNGNWLVSDGLAAGDKVIVAGVQKVKEGAPAVAKPWTPGQDANGKPAAGGAAPAGA
                     APAAGKAPADAAKPEQADAAKPAATDSNKQ"
     gene            complement(22523..23179)
                     /locus_tag="QEL58_001221"
     CDS             complement(22523..23179)
                     /locus_tag="QEL58_001221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HDS1675717.1"
                     /translation="MNPAYLPVALDARDERVFDAVRELLAQQGMQMSMDAVAQQAGCS
                     KQTLYSRYGNKQQLLRRVMQRHVGHATGAMVRALRTDDLRASLLQFATDFLEHFSQPH
                     VGQACRLIAADASQFPEEARTLYRHGAGALTLHLAEWIETVCMQGQLRHDDPHFMAEL
                     LLSMIAGQDFDKQRFHTPHRDDALLRRRWAEFSVDSFLRAFAPQPSPAPSTNQPRSSS
                     "
     gene            23430..>28398
                     /locus_tag="QEL58_001222"
     CDS             23430..>28398
                     /locus_tag="QEL58_001222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-glutamate dehydrogenase"
                     /protein_id="HDS1675718.1"
                     /translation="MKPQKTAAKTVKNKTKPAESEVAVTAGFSLEPVYTALRKRYPAA
                     AQAEAVAFATDFYKRMESDEFPHHSAEEWAALAAETLEFARARKAGKANVRVFNPTTK
                     ANGWESPHTVLQIVNDDMPFLVDTVTMSLAEQGVGVHVLGHPVLRFTRDKAGKLVKVG
                     EGDAESVMLLEIDRQPAEAMAAIEQAINKALDEVRAIVRDWQPMKDKALALADDLGKR
                     QLPVDDASRKEAQEFLRWAADNHFTFFGYREYRVEKQGKEEVLAPLNDTGLGLMRGKD
                     KSAARPVKTLAAQGLNATSGLKDALILTKTNARSRVHRAGYMDYIGVLEFDAKGKIIG
                     EQRFLGLFTSSAYNRRPWEIPLVRQRHEHVMKQSGLAPASHSGKALRHILETLPREEL
                     FQSSEDELFRTAMGVLGLQERVRSRLFLRRDKYSRFISALVYLPRERFNTDVRLRIEA
                     MLKDALHGEYVDSSVVLGESPLAQVHLIVRPKPGEMLDVDTAELEQKLAQVLRNWQDD
                     LREALVTRHGETEGLRIAARIGKALPAGYIEDNSTAVAANDVSQLDALTGPDDLRLSL
                     QAVPRESGDGLRLKLYRQLDDIPLSDALPMMENMGLRVIAERPYRLSVDNAPVYVQDF
                     EVESTAGAIDAASVDEAFGETFARVWHGDAENDGFNRLVLAAGLHWRQVAMLRGYCKY
                     LLQTGVPFSQAYVEGTFARYPLLARLLVELFEARFDPATGHESKDDIAAGQVQLKAHL
                     DVLAAGDDATLKVLKTVVDARKGDREAQMQAARDALLKLMDRVSSLDEDRILRSFMGV
                     IDATLRTSYYQTDANGQHGHVISFKFDSALVPDLPKPRPYREIFVYGPRVEGTHLRFG
                     AVARGGLRWSDRREDFRTEVLGLVKAQMVKNTVIVPVGAKGGFFAKTPPVNGDRDAVF
                     ANGVACYKLFIQGLLDITDNIVNNKIVPPVDVVRHDMDDPYLVVAADKGTATFSDIAN
                     GLAIAHGFWMGDAFASGGSVGYDHKGMGITARGAWESVKRHFRALGRDSQTQDFTAVG
                     VGDMSGDVFGNGMLLSRHIRLVAAFDHRHIFLDPNPDAATTFVERERLFTVPRSSWAD
                     YDAKLISKGGGIYPRSLKSIEITPQVREALGLDENVKALSPNDLMSAILKAPVDLLWN
                     GGIGTYVKAASEQHSDVGDRANNALRVNGGELRCKVVGEGGNLGMTQLGRIEAAQAGV
                     LLNTDFIDNSAGVDTSDHEVNIKILLNDVVRAKKLTVEQRNKLLASMTDEVAELVLND
                     NYRQNQALSLMERMAVKRLGSKQHFIRTLEQQGLLDRQIEFLPSDAELSQRKARGQGL
                     TRPELSVLLSYSKLVAFAQLLDSDIPEDPYLSKELQRYFPTPLQKKYADAMERHRLKR
                     EIIATAVTNQTINRMGATFLMRMQEDTGRSIAEVAKAYTISRETLDARALWAQIDALD
                     GKVPESVQIDALEVIWKLQRSFVRWLLSRPGAMPGITEAVNRYQGPFNDIRVASGVLP
                     DSQRPTYEALVAEWKEKGLPSALAQQLAELHFLEPAFDIIELARTRKLKPVDVSKVHF
                     RLGDALQLPWLFEQVDALEVNGRWHAVARGVLRDELAANHRNLAGQVLGTKGSSAEAK
                     VAAWMGRDDNSLRFTLAMLAELAEQKTLDYPTVSVAVQRLGQLAAH"
BASE COUNT         4967 a         9128 c         9630 g         4673 t
ORIGIN      
        1 ctggagcgtg cagaacggcc gtgcaggcgg aacgatctgg cccgccctcg tcatcccacg
       61 ctgcaggcaa gggagtatcg ttgtcgcagc cgccagcccg ggaagcgaca ccctgccagc
      121 cgccgcttcc ctttccccaa ctgaagtagt gcggagttga tgcaatgagc aaagctgcaa
      181 gcaagggtgc caccccggga ttccggatcg aacatgacag catgggcgag ctgcaggtgc
      241 ctgccgatgc cctgtggggt gcgcagaccc agcgcgccgt acagaacttc ccggtctcgg
      301 gccagcgcat gccgcgtggt ttcatccgcg cgctgggcct ggtcaagggc gctgccgccg
      361 gcgtcaacgc cgagctgggc cacctgccca agaccgtggc caaggcgatc caggtcgcgg
      421 ccgccgaagt ggccgccggt gactgggacg cgcatttccc gatcgacgtc taccagaccg
      481 gttcgggcac gtcctcgaac atgaatgcca acgaggtcat cgccaccctg gccaaccgcg
      541 ccggcaaggc gggcaagacc acggtgcatc ccaacgacca cgtcaaccag gggcagagct
      601 ccaacgacgt gatcccgacc gcgctgcgcg tgtcggcggt gctggcggcg catgaacagc
      661 tgctgccggc gctggtgcac ctgcgcaaga ccctggacaa gaagggccgc agcctgcgca
      721 aggtggtcaa gaccgggcgc acccacctga tggatgcgat gccgctgacc ttcgagcagg
      781 agttcggcgc gtggtcggcg cagctcgcct cggcgcagga acgcatcgag gacagcctca
      841 agcgcgtgcg ccgcctgccg ctgggcggta ccgcgatcgg caccggcatc aatgccgacc
      901 cgcgcttcgg cgcgcaggtg gccaaggcac tgaagcagca gacgtccttc aagttcgaca
      961 gcgccgagaa caagttcgag ggcctggccg cgcaggacga tgcggttgaa ctgtccggcc
     1021 agctcaatgc gctggcggtg gcgctgatca agatcgccaa tgacctgcgc tggatgaacg
     1081 ccggtccgct ggccgggctg ggcgagatcg aactgccggc gttgcagccg ggcagctcga
     1141 tcatgccggg caaggtcaat ccggtgattc cggaagcgac ggtgatggcc tgcgcacagg
     1201 tgatcggcca ccacaccgcg atcaccgtgg ccgggcagac cggcaacttc cagctcaacg
     1261 tcaccctgcc gttgatcgcg gtcaacctgc tcgatggcat cggcctgctg gccaatgtgt
     1321 ccacgttgct ggccgacagc gccatcgccg gcctgaaggt gcgcgaggac cgtgtggccg
     1381 aggcgttggc acgcaacccg atcctggtca ctgcattgaa cccgatcatc ggctacgaga
     1441 aggcggcggc gatcgccaag cgggcgtaca aggaacagcg cccggtgctg gacgtggcgc
     1501 tggaggacag cggcctggac gaggccgagc tgcgtcgctt gctggacccg accgcgctga
     1561 ctgccggcgg catccaggcc gggggcggtg gcgccggcgg ttgatcgaac ggcgtgcgga
     1621 ccaaggtccg cacccaccac acgcaggaac gccgccctcg ggcggcgttt ttcttcagcg
     1681 gcggtcggcg acgatgttgc cgaaggtgtc ggtgtagtcc ttgaattcgg ggatgcgctg
     1741 gatcaggtct gccggaatca cctccatgcc ctccggcggc tggatcttca ccggctgcat
     1801 gttcgggtcg gccggggcgg cgaccagggt gttctggcgc agcacctgca gcttgccgaa
     1861 catggtctgc aacatctgct tctgcgcgtc gtccagcgga atctggatct cgtccacctt
     1921 catcgtgcca tcgccgagga tgatgatgtt cggtgccggc gggcgacgca cggtgaccat
     1981 gccttcgctg acggaaatct tcggcttgcc gcgctcggcg cggtgattgc ggtaatcctt
     2041 gtcacagccg accaggccca ggcagagcag ggcggccagc agcaggaaca acttcttcat
     2101 ggcattcggt tcgggggcgt ccggggccgc cattgtaagc ccgccagcgc agcccggccg
     2161 accgtggaat gccaggggcg gccgggtgcg ctgatttgac tcacctggag aacgtggcgc
     2221 cgttgttctt gccgcagtcg tccacgtcac tctggtccat ggttgcgtac ggcttgaacg
     2281 ccggcagttc acgcgccagt gcctgttggc tggccagcat cgccgggagg cgttcgcaga
     2341 tgcgcttggc ctgggcctcg atctttgccg cctgggcatt gacgcgtttc tccaggccgt
     2401 cggtatcgcc actgaagatg cctttcagcg cttcgccggc ggcatcggtg ccgagcttgg
     2461 cgccggccac gccgatctcc atgccatcgg cggccacggc caccacctgg ctgcggtagg
     2521 cctgcagatg acggcgctgg ccggcatcga gcgggacatc cttgccgccg atcagcaggt
     2581 ggccgtcggg cgtgatctcg gcccgtggct ggttggccga agaaatcttg atgttgccct
     2641 cggtgatctc cttgcgggca tcgtcaatgg cttgcttgac cgtatcgccg acaccgctgg
     2701 tggcttcggc gacgctcttg ccgacggtct tgtcaggtga ggaggaagtg ccaccgcagg
     2761 cgatcagcgg caggcacagc agggtggcgg gcaacaggcg cgacagcttc atggtggtcc
     2821 cctggacgtg tctggaagag gttacttgcc gcgcggcagg gtgaccctgc cactgacgtt
     2881 gcggtgctcg acatcgccgc tgccgctgtg gtcgacggtc aggctgccgc gcacgccgtt
     2941 gacctggatg tcgcccgaac cgtggctgcg gacatgcaca tcgccgccga tgtcggccag
     3001 gtcgacgccg ccggagccga ccacgccgac ttcaacgctg ccctgcacgc gcttgaactc
     3061 gatgtcgccc gaaccgacgg tatccagccg ggcattgccg cgcacatcgc tgatcttcag
     3121 gtcgccggag ccgaccgtgc cggtgctggc gttaccgctg atattgcgca cattgacgtc
     3181 gccggagccc agcgacagca ggttcagcga accaccgcca tcgatgttga ggtcgcccga
     3241 acccactgcc gcatggatgt cgccgcgggt gccgcgggcc accgcatcac cagagccgac
     3301 atccacgctg agcgactgtg cgttctccac gctggcgtcg ccggagccga ccttgagctg
     3361 cagcggcagg ttgtccggca cgctgccgcg gatatccagc caggcgtagc tgttgccgag
     3421 gctgatgccg ctgttgcggc cctcgcggcg caggcttacc accagcttgt cgccctcctt
     3481 gcgctggtcc agcaccagct gatcaagcca ctcctggctg gatgcacagg cacgaccgtc
     3541 aagctggcca ccgcccttgc tggcgacgat cttcaggtca tgctggttga cttcgaacac
     3601 caccgcccgc gcaccggcca catccagctt cagcgtgcgc gcagcagtga acttgcagtt
     3661 cggggcatcg gcagcgagtg ccgacagcgg caacagcaac aacgcggaac aggcgagcag
     3721 ggaacgcatg ggtggtgcct ccaggtggat ggaatcagat ctcgccggcg cgcttgcgca
     3781 ggcggatggc gaggaagatg aacactgcac cgacggcggc accgatccac agttccggca
     3841 tcgccagcga tttcagctgc gaggccggcg acatcaggcc aaccaccgat tcgagatcgc
     3901 gacgcgaacc ttcaccggcg ctgaggcggt acaccaggtc catgcccgga acggcaccca
     3961 gcagcaggcg gccgacgatg ttctgccaga accagccggt ggtcaggccg atcagcggca
     4021 tgaccttggt ggtgctgatg atgacgccgg cgaacagtgg cagcatcacc gcccacagga
     4081 acggcttggt gcgcgcccag gccgagcaca acagcagcca gccggcggtg ggcagcgccc
     4141 acagggcgta gaccgggatc caggccaggt ggccggcggc cagggtcagc gggctggccg
     4201 gcccccagat cagcgtcatc gggctgccgc cgtgggccag cgcaacgagg ctgatcacca
     4261 gcatgaagcc gaacatggtg atgatgccgg cgatcacggc aatcaacggt gcgatgatca
     4321 gtgcactgat caccttggac agcacggtct gggtgtccga cagcggcagc gacttccaga
     4381 acaggatgct gcggtcgcga cggtcgtcgt agagcgcgcc caggcaatag aagaagacca
     4441 cgaaggccag caccaggaac ggccaggccg agctgagcac cagggtcagg tcgaggccgt
     4501 tgccaaggtc ggccaggtcc ttgccattga tgttgcgggt gagcagtgcc aggtccaggc
     4561 cattgacgtt gacgctttcg ccatcgacat gcagcccgcc gctgcgtgcg gcgcggttca
     4621 acgcgaacag gccgaaggcg atgccgatgc tgctcatcac cagcgagatg aggccggcga
     4681 tcagcggcgc gtagaggaag ccgccgcggt tttcccagta ctcgcgcttg agcagccagc
     4741 gcagggtacc cagcggactg acggggtggt tgacggcatt catgcgtagg tccccttcat
     4801 gatggcgacg aacaggtcgg ccaggcccgg gatgcgggtc tcgccaaggg tcgaaagctg
     4861 gtcgcgtggt acgccatcga acagcatcac ggtcttgccg aacgccaggc tgcgctcgtc
     4921 gatcggcttc agcgcgcggg cggtttccag ctggtcggca ttgaccagca gctcggtgta
     4981 acgctggccg acgtcgtcca tttccgcatc gagcacgatg cggccatcgc ggatgaacat
     5041 cacgtcgctg aggatgtgct cgatctcttc cacctggtgg gtggtgacga tgatggtttt
     5101 ctgctcgtcg aagtagtctt ccagcaggcg ctggtagaac tccttgcggt acaggatgtc
     5161 caggcccagg gtgggttcgt ccagcaccag gatgcgggca tcgatggcca tcaccagtgc
     5221 caggtgcagc tgcacgatca tgcccttgga cagttcgcgc acgcgctgct tgggctgcag
     5281 cttggtgttg gccaggaagc gctcgcagcg ggcgcggtcg aagcgcgggt ggacgccggc
     5341 cacgaaatcg atcgcctcgc gcaccttcag ccagcgcggc agcacggcaa cgtcggcgat
     5401 gaagcagatg tcgttcatca gctcgtcgcg gtgcagccgc gggtcgcggc cgagcacatt
     5461 gagttcgcct tccaccgagg tcaggccgag gatggccttc aacgcagtgg tcttgcccgc
     5521 gccgttgggg ccgatcaggc cgacgatgcg tccgctcgga atgctgaagc tggcattgtc
     5581 gagggcgacc gtggtcttgt aggccttgcg caggcctcgg gcggtgatga ccgattcgct
     5641 tgcagtgcta ttcatcagac tttcccctgg ggcagcaatt cgtcgaggct caggcccagg
     5701 cgctggatgc gctccagcac cgccggccat tcttcgttga ggaagcggtc ccgctcgctg
     5761 ctgcgcagct gcgtggccgc ctgctcggtc atgaacatgc ccaggccgcg gcgcttctcg
     5821 accaggcctt catcggccag ttcctggtaa gcgcgcgaaa cggtgatggg gttgagttga
     5881 tagtcggcgg ccacctggcg caccgaaggc agggcatcgc ccggcttgag gattccgtcg
     5941 agcatcatgg cgatcacacg ctccttcaac tgacggtaga tgggagcgcc gtcgctccac
     6001 tggatgtcgc tcatattcag ctccgtgggg tcagcggctg ggcgaacgag aaatacggca
     6061 tggacaggga gctgtgcagc cgacgcgggg gaggggggga ggagtcggcg ttccctgccg
     6121 gcgaagcggt tgtgtcctgt gcactgccgg agggcagtgc ggtggcggga gaggcgggca
     6181 cggccagcca ggtgagcacg agcagggtgg aaactgcagt gaccgcaggc gcggtgagcg
     6241 tgcgacgcat ccgggtgttc atggcttccc cctgtctcag gtgactggtg ttgtatgcaa
     6301 ctataacacc ggcacgccgc cgtgcaagtc cttgccggcc ccaactgatg gcaggggtgg
     6361 tcatatcgcc gaaatatccc atcaagcagt tgattctaaa gagaaataaa tctgtcgtgc
     6421 ggcgaggggg cgatcgggct tccattcagt gatgtccatg ccatgtcatc actgcggtgc
     6481 gccggcaggc tgggccaggc aaacgccatg ccgcgcaaag ccatccgggg cctgtgccat
     6541 cagggcggca ggggcccggt gctatagttc ggccgattcc cggccggtag cggccgggcc
     6601 ctgtgaatgg ctaccgcgga ctgttcctga tgcctctgtc gaccgtttcc ccgcgccgca
     6661 tgcgcggcct gtccctgctg gtcctgatcg tggctggtgt cgctggttcg gccagtgccc
     6721 tggcggccga tctgctcgac ctggagtacc ggccgctggc cagcaagcag caggtcaacc
     6781 tgcagcagcg ctaccacggg caggtgctgc tggtggtcaa caccgccagc aagtgtggct
     6841 acacgcccca gtacgaaggc ctggaggcgc tgcagaagcg ctatgccggc cgcggcttcg
     6901 ccgtgctcgg gttcccgtcc aatgatttca agggccagga gccgggtgac gaaaagcaga
     6961 tccaggattt ctgcacgctg acctatggcg tcaagttccc gatgttcgag aaggtgcacg
     7021 tggtcggggc cgaggccacg ccgctgtacc agcggctgac cgctgcgacc ggcgtcgcgc
     7081 cgggctggaa cttccacaag tacctggtcg gccgcgatgg caaggtcatc gcccagttcg
     7141 ccagcaaggt cacgccggac gatccgcagc tgaccgcggc catcgacaag gccctggccg
     7201 cagcggccac gcattgatat ccgccacgca tgcctcgaca tctccggcat gcgtgcgaca
     7261 atgtttcttt tcgcgccgac gtcggcgccc agacacttcc aggaatgcag cgaatgaaga
     7321 tgggaatgcg cggcgccgcg gcgtcggttc tgattctggc gatgggcact tcgggtgtcg
     7381 ctctgtcgca acaaccggct gcccccgcag ccgccaagga gaccgcaacc ttgaattccc
     7441 ccaagcagaa gctcggctat gccatcggcc tggacgtggc caagtcgttc accccgattg
     7501 ccgatgagat cgacgttgcc gccctgcgta ccgcggtgga gcgttcgttc gaaggcctgc
     7561 agccgcagat cacccaggaa caggccaagg ccaccgatgc cgccctgcgc caggtcgtga
     7621 tggcccgcag tggccagcag gtaccgggcg ttgcgccggg ttcgcagccg ccgaaggtcg
     7681 atcgcgtcaa ggtgtcgcag atgatcggtt cgtactcggt cggtccgtcg ctggcgcagc
     7741 tgaaggacga catcgacgtc gcctcgctgt ttgacgcgat cagcaccggt ctgaacaagg
     7801 gccagcccaa gatgacggaa gctgacgcga ccgccaccat ccaggcgttc atgggcagca
     7861 agcaggctga aatgcaggcc aaggccgccg ccgccgcgca gaccaaccgc gaagaaggca
     7921 atgccttcct ggccaagaac aagacccagc cgggcgtggt gaccaccgcg tcgggcctgc
     7981 agtaccaggt catccgcccg ggtagcggcg agcgtccgct gccgagcagc aaggtgcgcg
     8041 tgaactacga aggcaagctg ctcaacggca ccgtgttcga cagctcctac ggccgccagc
     8101 cggccgagtt cggcctggac caggtgatca agggctggac cgaaggcgtc gcgctgatgc
     8161 cggtgggctc gaagtaccgc ttctggatcc cgggcaacct ggcctacggc gaaaacggca
     8221 ccccgggtgg cccgatcggc ccgaacgcaa ctctgacgtt cgacgtcgag ctgctgggcg
     8281 tcctgccgta agcgaccacg gagcctgcac ggacatgcgc gttgcgattt tcggtaccgg
     8341 ttatgtaggg ctggtgaccg gcacctgcct ggccgacgtt ggtcatcagg tggtctgcgt
     8401 cgacatcgac caggccaagg tcgatggcct caaccggggc atcatcccga tctatgagcc
     8461 gggcctggag ccgatggtga aggccaacca tgccgcgtcg cggctggcgt tcaccaccga
     8521 tgccgcggcc gccatcgagc atggccaggt ggtgttcatc gcggtgggca cgccgccgga
     8581 cgaggatggc agcgcggacc tgcagtacgt gctggccgtg gcccgtacca tcggccggca
     8641 catgagtgtg ccgaccgtgg tggtcaacaa gtcgacggtg ccggtcggca cggccgacaa
     8701 ggtgcgtgcc gccatcgccg aggaactggc cgcacgtggc gcggacatcg ccttcgacgt
     8761 ggtgtccaat ccggaattcc tgaaggaagg cgacgcggtc gccgactgca tgcgcccgga
     8821 tcgcatcatc atcggggcga ccagcgaaga gtcggtggcg gtgatgcgcc gcctgtatgc
     8881 gccgttcaac cgcaaccacg accgcgttgt ggaaatggac gtgcgttcgg ccgagctgac
     8941 caagtacgcg gccaacgcga tgctggcgac caagatttcg ttcatgaacg aaatcgccaa
     9001 catcgccgaa cgcgtcggtg ccgacgtcga gcaggtccgc cagggcattg gctcggaccc
     9061 gcgcatcggc tggcacttca tctacccggg tgccggctac ggcggctcgt gcttcccgaa
     9121 ggacgtgcag gcactggccc gcaccgccca gcagcatggc ctggagccga agctgctgaa
     9181 cgcggtggag gcggtcaacg aatcgcagaa ggggcatctg ttcgccctca tccagcgtca
     9241 ctacgacagg ggcgaggatg aaggcgtgcg cggcaagacc tttgccgtgt ggggcctcgc
     9301 attcaagccg aataccgacg acatgcgcga ggcatccagc cgtcgcctgc tggcacagct
     9361 ctgggaaggg ggcgccaccg tgcgtgccta cgaccctgaa gccatgcatg aatcgcagcg
     9421 gatcttcggc gagcgcgacg acctggtgtt ctgcagcagt gccgatgacg cgctgcaggg
     9481 ggccgacgcg ctggtggtgg tgaccgagtg gaagcagttc cgcagccccg atttccagaa
     9541 gctgcgcgag cagctgaagg acgcggcggt gttcgacggg cgcaacctgt atgacccggc
     9601 tgaagtggaa gcggcaggcc tggcctacta cggcatcggc cgggggcgct cgctgcatgt
     9661 ctgatctgct gccgaccgaa cgtgagcagg cgctggaagc gcgcctggtc gagctggaaa
     9721 tgcgcgtgtc cttccaggaa caggcgctgg ccgaactgag cgatgcgctg gccgatgccc
     9781 gcatgcaggg catgcgcaac gccgatgtgt tgcgcgtgct gctggaagac ctgggcaagg
     9841 tccgcaacgc actgaactct tccgatccgg cgagcgaacc gccgccgccg cactactgat
     9901 ccgaacccta tgagcgatac cctccgcgac cagctgatgg gcctgggctt caagcccgcc
     9961 cccaagcccg agcgcaagaa tgatggcccc cgccgcgatg gccgcccgca gggcaagggt
    10021 ggcaatggca atggaaagcc gcagggcgct ggcaagggcg aacacaagcc cggcgagcgt
    10081 cgtggccatg gtcatggcgg cgccggcaag cccggtccgt cgcgtggccc cggccagcaa
    10141 ggcccgcgca agccgcgcag cgccgaagag atggacctgg ccaaggccta cgccatccgt
    10201 gcgcagaagg aaaaggaaga gcgcatcgag accgagcgcc tgaagcagga agaagcacgc
    10261 gtccgccgcg aggcgaaggc aaagctggaa gaactgctga aggacaagag cctcaatgcc
    10321 gaagcggcgg acattgcccg ccacttcccg tatggcggca agatcaagcg catctacgtc
    10381 accgccgaac agctgaccgc actcaatgcc ggtgaactgg gcgtggtgca gctcaatggc
    10441 cgttacctgc tggtgaccgc cgaggtgctg gcacagtccg aagcggtgtt cgccgcgtcg
    10501 gtcgcgctga aggtcgaccc gaatgcgccc gccgaggaag atccgtacgc ggatccgcaa
    10561 taccaggtgc cggacgacct ggtctggtaa gcggaactgc aggatgagga aaacgccggg
    10621 cattgcccgg cgttttcgtt acggggcgtg cacggcgctg cggcgcgcgc ggatcagcgg
    10681 caggctcagc gcgaagaagc acagcagcgc accgaccaga gcgaagccac tgccggccag
    10741 gaatgcggtg cggccatcat cgattttcca cagctggccg gcgatgagtg cgcccagcac
    10801 gccgccgaca ccggacgaga agccgtacag caggccctgg ccatggccat tgaggcggcc
    10861 ggggaagtag gttgccagca tctgcatcgc ggccgcgaag aaggcagcaa agcccagcgc
    10921 gtgtgcgctt tgggcgacca gcatcaccgg caggttttcc gggaacagcg cggtgacggc
    10981 ccagcgcagg caggaactga ccagggcgat cagcagcatc cagctggcgt catagcggcg
    11041 gaagaagcgg ccgatggtga agaacacgcc gacttcgaac accacgccga cggtccacag
    11101 caggccgagc gtggaggtgc gatagccatg atggtccatg tagaccgaga agaacgtgta
    11161 gtacggcccg aacgacagct gctccatgaa cgcggccagg aagaacgcca gcaccggcgg
    11221 gcgccgtacg atctgccaga agccgctggc gtcgcccgcg gccttgccga tgccgcgcgc
    11281 atactggttg ctgaaggccg acgccaccag caggacgaac agcggcagca tcatccaggg
    11341 cagcagcccg gcacggctgg ccgagccgtc accttcgatc agccagccga acagggtgac
    11401 gatggcgatg aaaccgagcg atccccagac ccggatcagc ccgtagcgat ggctgtcgct
    11461 gccgaggtgg gtgagggtga tcgattcgaa ctgcggcatc accgcgttgt agaagaagca
    11521 gaacaccacc atcgccgggt acatccatgg ctgcggcaag ggcagcagga aggcggcaaa
    11581 gctgagcagg gtcagtacgc agccgatgcg cagcaggcgg atcggtcgtg gcgaagccgc
    11641 tgccagcgag gtccaggtgc tgggcgcgac cacgcgggtg gcgtaccaca gccccatcat
    11701 cacgctgatc gcggtcacgc tcatgccgcg cgcggtcagg aacaggctcc agtacggagt
    11761 gaacgcgccg agcgccgcgt agtagaacag gtagaagctg gagagacggg caacgggaac
    11821 ggtcatcgcg gaatgatgaa gcaaaaaggg gacggagggg attaagtcgc ttgtgccaca
    11881 aacgacttaa tcccctccgt cccctttgtg tgtcattcgg gatcgtagtc gaggttggag
    11941 gccagccagc gttcggcctg ggcgcggtcc acgcccttgc gccgggcgta gtcgccgacc
    12001 tgctcgcggc tgaggcggcc gaccacgaag tactggctct gcggatggct gaagtagtag
    12061 cccgatacgg ccgccgtggg cagcatcgcg aagctctcgg tcagctccat gccggcgttg
    12121 tcctcggcct gcagcaggtc gaacagccgg cgcttctcgc tgtgctcggg gcaggccgga
    12181 tagccgggcg ccggacggat gccgcggtac tgctcgtcga tcagggcttc gttgtccagc
    12241 gtctcggcgc gctcatggcc ccagaactcg gtacgcacgc gctgatgcag gcgctcggcc
    12301 agggcctcgg cgaagcggtc ggcgagcgcc ttcagaagga tcgcgttgta gtcgtcatgc
    12361 tcggcctcga agcgcgcgac gtgcgcgtcg atgccgatac cggcggtgac cgcgaacgcg
    12421 ccgatccagt cctgcttgcc actgtcggcg ggcgcgatga aatcggccag gcagaaatcc
    12481 gggcgctcgg ccggcttgtc cacctgctgg cgcaggaagt gcagggtggt ttcgccctgc
    12541 gggtgctgta cgcgtacgtc gtcgccgatg ctgttggccg gccacagccc gaacaccgcc
    12601 ttggcggtca gccacttttc accgacgatg cgatcgagca tcgcccgcgc atcctgatac
    12661 agctcgctgg cctgggtgcc cacgatctcg tcggtgagga tcgccgggaa cttgccggcc
    12721 agttcccacg cctggaagaa cggggtccag tcgatgtagt cgaccagctc cgcgagcgga
    12781 tagtcgtcga acacatgcag cccgggctgg ttgggcacag gcggcgtata ggtgtcccag
    12841 ccgccctgga acttctgccc gcgcgcgtgc tccagcgaga ccaggcgctt ggcgtcgccg
    12901 cggttgcgat ggcgcgcgcg gatctcggcg tagtcggcct cgttggctgc gacgaacgcc
    12961 tcgcgcaggt cgcgcgagat caacgactgg gccacgccca ccgcgcgcga ggcgtccttc
    13021 acccagatcg tgggggcctg gtagtgcggg tcgatcttca gcgcggtgtg cgcgcgggag
    13081 gtggtcgcgc cgccgatcag caacggaagg tcgaagccct ggcgctgcat ctcgcgtgcg
    13141 acgtggctca tttcttccag cgatggggtg atcagcccgg acaggccgat gatgtcggca
    13201 tgatgctcgc gtgcggcatc gaggatcttc tgcgccggta ccatgacgcc cagatcgatc
    13261 acctcgaaat tgttgcaggc caggaccacg ccgacgatgt tcttgccgat gtcgtgcaca
    13321 tcgcctttca ccgtggccat gatgatgcgg ccattgctct tggccgaatc gccgctgcgt
    13381 gccttctcgg cctcgatgta aggcagcagg taagccaccg ccttcttcat cacgcgtgcg
    13441 gacttcacca cctgcggcag gaacatcttg ccggcaccga acaggtcgcc gacgatgttc
    13501 atgccatcca tcagcggccc ttcgatcacg tccagcgggc ggctggaggc ctgccgcgcc
    13561 agctcggtgt cctcttccac gaaggcatcc aggccgtgca ccagtgcatg cgccaggcgc
    13621 tgcgccaccg gcttttcgcg ccaggtgagg tcttcggttt tcgccgcgcc cttcctgccc
    13681 ttgtagcgct cggcgatctc gagcaggcgc tcggtggcgt cgctgcggcg gttgaggatc
    13741 acatcctcca cgcgctcgcg caggtccggc tccagctcgt cgtagatcgg catggcaccg
    13801 gcgttgacga tgcccatgtc catgccggcg gcaatcgcgt ggtacaggaa caccgagtgg
    13861 atggcctggc gtaccgtttc gttgccgcgg aacgagaagg acacgttgga gacgccgccg
    13921 gagacatggc agtgcggcag cgtctgcttg atgatgcggg tggcctcgat gaagtccacc
    13981 gcgtagttgt cgtgctcttc gatgccggtg gcgacggcga agatgttcgg gtcgaaaatg
    14041 atgtcctgcg gcgggaagcc gatctcgtcg accaggatgc ggtaggcgcg ggtgcagatc
    14101 tcgaccttgc gcgcgcaggt atcggcctgg ccgctttcgt cgaaggccat caccactgcg
    14161 gcggcgccgt agcgaagcac cttgcgtgcg tgctcgcgga acagggcctc gccttccttc
    14221 agcgagatcg agttgaccac gctcttgccc tgcaggcact tcagcccggc ctcgatcacg
    14281 ctccacttgg acgagtcgac catcaccgga atacgcgcga tgtccggctc ggacatgatc
    14341 aggttgaggt agcgggtcat cgccgcttcc gaatcgatca ggccctcgtc catgttgacg
    14401 tcgaggatct gcgcgccact ggccacctgc tgtcgggcca catcgacggc ttcctcgtag
    14461 cggccttcct tgatgagctt gcggaactgc gcgctgccgg tgacgttggt gcgctcaccg
    14521 acgttgatga acagcaggtc cggggtgatg accagcggtt ccaggccgga caggcgggta
    14581 tacgacgggg tgctcatgcg gcctgctgct cctggctgcc gggcagggcg cgcggcggca
    14641 ggccggcgac cgcctcggca atggcgcgga tgtggtcggg ggtggagccg cagcagccgc
    14701 cgaccaggtt caacaggcca tcctcggcga agccacgcag ggtggccgcc atctcttcgg
    14761 gcgtttcgtc gtactcgccg aaggcattgg gcaggccggc attggggtgg gcgctgacat
    14821 ggcagccggc aacctgcgaa agggtttcca cgtgcggtcg catcgctgcg gcgcccaatg
    14881 cgcagttcag cccgatcgac agcggccgcg catgcgccag cgacgcatgg aaggcctcgg
    14941 cggtctgccc ggacagggtg cgtcccgatg catcggtgat ggtgccggaa atcatcaccg
    15001 gcagccgtgc gccacgtgcg tcaaaggcct cctccagcgc gtacagcgcg gccttggcat
    15061 tgagcgtgtc gaagatggtt tcgatcatca gcgtgtcggc gccaccgtcg atcaggccct
    15121 cgatcgcttc gcggtaggtg tcgcgcagtt cgtcgaagct ggtgttgcgg aagcccgggt
    15181 cgttgacgtc ggggctgatg gaagcggtgc ggctggtcgg gccgatcacc ccgatgacga
    15241 agcgtggctt gtccggcgtg gtggcttcga ccgcatcgca gcacgcgcgt gccacggcgg
    15301 cccccgcttt gttcagctcg tacaccaggt gttgcaggtg atagtcggcc tggctgaccg
    15361 aagttgcgtt gaacgtattg gtctcgacca gatccgcacc ggcttcgagg taggccgtgt
    15421 ggatgtcggc gatgacctgc ggccgggtca gcagcagcag gtcgttgttg cccttcaggt
    15481 catggccttc cggcgcgccg tggtcgcatc cggggccatg ggcatggtcg tagccacccg
    15541 cgaaacgctc gccacgataa tcgtcctcct gcaggccgtg gcgctggatc atcgtgccca
    15601 tcgcaccgtc gatgatcagg atccgctcgc gcagcgcgtc aagcagggca ttggcacgat
    15661 caggatgcaa ccagggcagg gcggacatgc ggtctccagc tcagggcttg ttggcgatca
    15721 gcgaaatcac ttcgaaatgg ggtggacgct tctcgcgggt gactgtttcc aggctggaca
    15781 cctgcagccc ggccttgtcg acgaatttgc gcagctcctt gtcgctgaag ccgaggttga
    15841 cgtggccgta ggcctccacc gccgccttgt gctcgtggcg ggccaggctg cacagcagca
    15901 ggcggccgcc ggagcgcagc acgcgtgcgg cttcggtcac cgcctgtgcc ggtttgctgg
    15961 cgtaggtcag cgcatgcatc agcaccacca ggtcgaagct gccgtccttg aacggcaggg
    16021 catgcatgtc gccctcgcgc acttccacgt tgggcaggcg gcgcaagcgc tcgctggccg
    16081 cggcgaccac gcgtgcgctg gtgtcgatgc agatgtagcg cttggcgtgg ggggcgacga
    16141 gttcggccag tacgccgtcg ccggacgcga tatccagtac gtcgccggtc tccagcagcg
    16201 gcagcgcggt ccgggccagt gcctcccagg tgcgtcccgg ggagtagtgg cgttccatgt
    16261 ccccggccac gctgtcggcc cagttctggt cggcggcgcg gtgggccagc accgcagcca
    16321 cccgttcggc atcctggcgc agcagcgggt catcgcttcc gttgctcaag gcgtgccaca
    16381 atgcgcgctg cgccgggtcc agctgggcct cgtcgaagcg gtagtaggcc gacacgcctg
    16441 cgcggcggtc gcggaccagg ccggcttcct tcaggcgtgc gaggtgcgtg gacacgcgcg
    16501 gctgcgctag gcgggtgatc gccgacagct cggccacggt cagctcttcc tgctccagca
    16561 gcgccagcag gcgcacgcgg gtcgcatcgg cgaacacctt caggcgggtc gaccagtctt
    16621 caagatccat aaatatctac ctatcgcgat atagagatat attcgctgag agggcctgcc
    16681 gcggtcaagt cgctggcgta cggaagcctt cgcgccccgg tacaatcagg ccatccgggc
    16741 acgccttgcg tggcccactt catcatgtac ctgggagggt gttgtggatt tcagctttac
    16801 tgaagaacag ttgatgctgc aggacgtggc gcggcgcatc gcgcaggaga agattgcccc
    16861 gagcgcggag catcacgacc gtaccggcga gttcccgctg gacaacatcc gcctgctcgg
    16921 cgagaacggc ctgatgggca tcgaagtgcc gaccgaatac ggcggtgcag gcatggaccc
    16981 ggttgcgtac gtgctggcga tggtggaggt cgccgccgcc gacgccgccc actcgaccat
    17041 catgtcggtg aacaattcgc tgttctgcaa cggcatcctt acccacggta ccgaggcgca
    17101 gaagcagacc tacgtgcggg cgatcgccga gggcgaggcc atcggtgcgt tcgcgctgac
    17161 cgagccgcag tcgggctcgg acgcgaccgc aatgcgttgc cgcgcggtga agcaggccga
    17221 tggcagcttc gtcatcaacg gcaagaagag ctggatcacc tccggcccgg tggccaagta
    17281 catcgtgctg ttcgcgatga gcgagccgga caagggcgcg cgtggcatca ctgccttcat
    17341 catcgatacc gacaaggccg gctttggtcg tggcaagacc gaaccgaagc tgggcatccg
    17401 tgcttcggcc acctgcgaga tcgagttcaa cgactacgtg gccgcggcag aagatgtgct
    17461 gggccaggag ggcgagggct tcaagatcgc catgagcgtg ctcgacgccg gccgcatcgg
    17521 cattgcctcg caggccatcg gcatcgcacg ggccgcctat gaagcgaccc tggaatacgt
    17581 gaaggagcgc aaggcctttg gcgcggccat cggtactttc cagatgaccc aggccaagat
    17641 cgccgacatg aagtgcaagc tggatgcagc cctgctgctg acgctgcgcg cggcatgggt
    17701 gaagggccag ggcaagcgct tcagcaccga agcggcggtg gcgaagctga ccgcgtcgga
    17761 agcggcgatg tggatcaccc accaggcggt gcagatccat ggcggcatgg gctattcgaa
    17821 ggaaatgccg ctggagcgtt acttccgcga tgccaagatc accgagatct atgaaggcac
    17881 ctcggaaatc cagcgcctgg tgatcgcccg caacgagacc gggctgcgct gatccgctct
    17941 ggtagatgcc aaccttggtt gggatccagc ggtgccaacc aaggttggcg actaccggct
    18001 tcatggcacg aatgaaaaag gccccggatc gctccggggc cttttcgttt caacccagcg
    18061 ccggatcaac gatccgggcg gtgggcactt tcggcgtcgc gctggcgttc cataaactcc
    18121 ttggagggtt catccagctt gtcgcccagc atgcgccgca cgaccacgaa gaacaccggg
    18181 atcatcagca ggccgagcag ggtggcgaac agcatgccgc cgatcacgcc ggtaccgatg
    18241 gcgtggcggg agttggcgcc ggcgccggtg gagatcgcca tcgggatcac gcccatgatg
    18301 aacgcgaacg acgtcatcag gatcgggcgg aaacgcaggc gtgccgcctc gatggtggca
    18361 tcgcgcaggt tcttgcccgc cgcacgctgc tccaccgcga actccacgat caggatcgcg
    18421 ttcttggccg ccaggccgat cacggtgatc aggccgatct tgaagaacag gtcgttgggc
    18481 aggccacgca gcatcgacag gcccagtgcg ccgagcacgc ccagcggcac caccagcagc
    18541 accgccaccg ggatcgacca gctttcgtac agcgctgcca ggcacaggaa caccacgacg
    18601 atcgacagca ccagcagcag ggtggcggcg ttgccggcca ggatttcctg gtaggacatg
    18661 ccggaccagt cgtagccgaa gccggccggc aggtcgtcgt tgacgatcgc ctccatggtc
    18721 tgcatcgctt cacccgaact ggtgcccggg gcctgcgaac cgacgatgtt gatcgccgag
    18781 tagccgttgt agcggctcag cgacggcgat gccgacaccc attcggactt gaccaccgtg
    18841 ttgagcggga tcatcgcgtt ggtgccatcg gcattggtgg tcaggctgga cgggctgtag
    18901 aagctcttca gcgactcctg gcccgtgcgg tacggaccat cggcctgcat cgtcacgcgc
    18961 ttgatgcggc cttcgtagaa gaagtcgttg acgtacaccg gggccagcat cagctggatg
    19021 gtgctgtaca cgtccgacac cgacatgccc atcgactgcg cctgaacgcg gtccacgtgc
    19081 agctgcagct gcggggcgtt ctccagcccg ttcggacgca cgccaaccag tgcttcgggc
    19141 ttctgcgcgg cgttgccgag caggatgttg cgcgcctggg tcagctgttc gtagccggca
    19201 ccactgcggt cctgcagcca catgtcgaag ccgccgaact ggccgaggcc ctgcacggtg
    19261 ggcaggttga ccacgaagat ctgcgcttcc ttgatgccat agaacgcgcc gttcatgttc
    19321 tggatgaact ccggcgcggt gaacttgcgt tcctcccacg gcttcaggcg gatgaagccc
    19381 atgcccacgt tctcgccgga accgacgaag ctgaagccgg ccacctgcag catgccttca
    19441 tagccatcct gcttatccag gatgccacgc atctgcgcga acacctcgtt ggtctggccc
    19501 ttggtcgagc ccggcggcag ctgcacgatc gccagtgcgt agccctggtc ctcttccggc
    19561 aggaagctgc ccggcatgcg ggtgaacagg aagccgcaca gcgcggtcag caccacgaac
    19621 aggatcatcc agcgcggcgc gtggcgcacc gccgaggtga tgtggcccac ataggtgtgg
    19681 ctgatcttgt cgtaatactt gttgaaggtg cggtagatga tgttcgggtt gtcgttgtgc
    19741 gtcggcttga ggaaggtcgc gcacagcgcc ggggtgaagc ccagggccag gaacgccgag
    19801 aacgccatcg agatggcgat ggtcagcgcg aactgcttgt agatctcacc tgccgcgccg
    19861 ccctgcaggg cggacgggat gaacaccgcg gccagcacca cggtgatcgc caccaccgcg
    19921 ccggtgatct gggtcatcgc cttctgcgtg gccggcttcg gcgccaggcc ttcctcggac
    19981 atgatgcgct cgacgttctc gatcaccacg atcgcgtcgt cgaccacgat gccgatcgcc
    20041 agcaccatcg cgaacagggt cagctggttg atcgtgaagc cgatcatcca catgcccagg
    20101 aaggtgccga gcagggccac cgggatgacc agggtcggga tcagggtggc gcggaagttc
    20161 tgcaggaaga tcagcatcac caggaacacc agcaacaccg cttcgaacag ggtcttgacc
    20221 acttcctgga tcgagatctt gacgaaggtg gtgctgtcgt acggcgagaa ccaggtcacg
    20281 ccggacggga agctgggctg cagctcgtcc atcttgccgc gcaccgcttc ggccacgttc
    20341 agggcgttgg cgcccggcag cagctggatg gcgaaggcac cggtcggctt gccgttgtac
    20401 tgggtatcga agccgtagtt gttggcaccg aaggcgaccc gggcgatgtc cttcaacagc
    20461 acgcgcgagc cgtcagcgtt ggcgcgcagg atgatgttct cgaactcctg cggcgaactg
    20521 aagcggcctt cggccgagac cgtggcggtg aagtgctggc cctccggcga cgggtccgaa
    20581 cccagcgcac cggcggcgaa ctgcacgttc tgcgcgcgca ccgccgccag cacctggctg
    20641 gccgacaggc cgtagccctg catcttctcc gggttcagcc agatgttcat ggcgtactcg
    20701 gaaccgaact gctgggtgct gccgacgccg gggatacgcg agacctggtc gagcacgcgc
    20761 gaaccgacga tgtcgttcag ggcatcacgg ttgatggtcg gtgtatcgga ctgcagtgcg
    20821 accaccatca ggaagccggc gttggccttg gccaccacca cgccctgctg ggtcacttcc
    20881 gaaggcaggc gtggcgtggc cagcgatacc ttgttctgca cctgcacctg ggcgatgtcc
    20941 ggatcggtac cggtctcgaa ggtcagggtg atctgcgccc ggccgttgga ggacgaggaa
    21001 gagctgaagt acagcaggtg atcgataccg gtcagctgct gctcgatcac ctgggtgacc
    21061 gacttctcgg tggtgtccgc gctggcgccc gggtaggtgg ccgagacggt cacctgcggc
    21121 ggggcgatgt tgggatagga ctccacgccc aggttgagga tcgcgatcac gccgctgagc
    21181 gagatcagga tcgcaaccac ccaggcgaag actggatgct cgatgaaaaa tttaggcatg
    21241 acggaaggtt cccgttactg cttgttcgaa tcggtggcgg ccggcttggc cgcatcggcc
    21301 tgctcgggct tggccgcgtc ggccggtgcc ttgccggcgg ccggtgccgc acctgccggg
    21361 gcagcgccgc ctgcggcagg cttgccgttg gcgtcctgcc ccggggtcca cggcttggcc
    21421 accgccggag caccttcctt gaccttctgc acgccggcca cgatgacctt gtcaccggcg
    21481 gccaggccgt cgctgaccag ccagttgccg ttctgcgcgc catcggtctt gacgttcttg
    21541 cgcaccacct tgccgtcggt gccgaccacc atcacgtaac cgccggtggt gtcgcgcagc
    21601 agcgcctgct gcggcaccag gtaggcattg ttgcgctcgc ccaggttggc ctggaagctg
    21661 acgaaggcgc ctggcagcag gatctgctgc gggttcggca gcagcgcgcg cagcgagacc
    21721 gcgccggtgg ccggatcgac cgtggtcgag gagaagtcca gcgtgcccgg ctcgctgtag
    21781 gtggtgccgt cggccagctt gacgctgacg gtagccttgc catcgccgga cagggccagt
    21841 gcgcccttgg cctgctgcgc acgcagctgg gtcagctcat cgacgctcag cgagaagttc
    21901 acgtacagcg ggtcgagctg gtcgacggtg gtcagcaggg tcacatcgcc ctggccgacc
    21961 agcgcacctt cggtgacctg ctgcttgttg gccacgccgc tgatcggtgc ggtcacttcg
    22021 gtgtagccca ggttgatgcg cgaggaggtc aacgcggcct cggcctgctt gaccgcggcc
    22081 agggcggtgc gctcggccga ctcggcgttg tccaggtcgg acttggagac gaactgctgc
    22141 ggggccagcg agcgcgcacg gtcggcggcg accttggcgt tggcataggt ggcacgggcc
    22201 gaggccagct gggcttcgga ggcgttcagc gaggcacgca gcggcgccgg gtcgatcagg
    22261 aacagggtct ggccctgctt gacctgggag ccttcctggt agacgcgctt gagcagcacg
    22321 cccggaacgc gcgcgcgcac gtcggcgctg cggaacggcg acaggcggcc gaccagctcg
    22381 cgctgcagcg gcagggtctg cggcttggcg tcgatgacgc ccacctccgg cggcgggggc
    22441 gtctgctgtt ccggcttctt gcaggcggcc agagcgacag caacggcgca cgtcaaggca
    22501 agggtgcgga gtggggcggt catcaggagg aactccgggg ttggtttgta gacggggccg
    22561 gcgacggctg tggcgcgaac gcgcgcagga agctgtcgac ggagaactct gcccagcgcc
    22621 gacgcagcag cgcgtcatca cggtgggggg tatggaagcg ctgtttgtcg aaatcctgac
    22681 cggcgatcat gctcagcagc agctcggcca tgaagtgcgg gtcgtcatgc cgtagctggc
    22741 cttgcatgca aacggtttca atccattcag caagatgaag cgtcagcgcg ccggcgccat
    22801 gccggtacag cgtacgcgcc tcttcgggaa actgggacgc gtcggcggcg atcagccgac
    22861 aggcctgtcc tacgtgcggt tggctgaaat gctccaggaa gtcggtggcg aactggagca
    22921 ggctggcacg caggtcgtca gtgcggagtg cacggaccat ggctccggtg gcgtggccga
    22981 cgtggcgctg catcacccgg cgcagcagtt gctgcttgtt gccgtagcgc gaatacaggg
    23041 tctgcttgga acagcctgcc tgctgggcca ccgcgtccat gctcatctgc atgccctgct
    23101 gcgccagcag ttcgcgcacg gcgtcgaaca cgcgctcatc gcgtgcgtcg agggcaacgg
    23161 gaaggtaggc cggattcacg cggtggacta taccgtccag ttcaggattg tggaatcgca
    23221 tcggcgtggc cgcgtgtgtc ttccggtaac acgctttgcc gatcctgtct gcagtgctga
    23281 aacggacgcc acgaccatac cggtgcgaac tgaataggcg tctaaaccgc agcaaacccg
    23341 aatctgctta ttccgtcctg cagcaaggcc ttttcgtgcg gtagggctac aatttcattt
    23401 tcccaactga gcaagcgcat cgctctgcca tgaaaccgca aaaaaccgca gccaagaccg
    23461 tgaaaaacaa gaccaaacca gcagagtcgg aggtcgcagt gaccgctggt ttctccctgg
    23521 agccggtgta cacggccttg cgcaagcgct accccgcggc cgcacaggcc gaagcagtgg
    23581 ccttcgccac tgacttctac aagcgcatgg agtcggacga gttcccgcac cacagcgctg
    23641 aagagtgggc cgctctcgcg gctgagacgc tggaattcgc ccgtgcccgc aaggccggca
    23701 aggccaacgt ccgcgtgttc aatccgacca cgaaggccaa tggttgggaa tcgccgcaca
    23761 cggtgctgca gatcgtcaac gacgacatgc cgttccttgt cgataccgtc accatgtcgc
    23821 tggccgaaca gggcgtgggc gtccacgtgc tgggccaccc ggtgctgcgc ttcacccgcg
    23881 acaaggccgg caagctggtc aaggtcggcg agggcgatgc cgaatcggtg atgctgctgg
    23941 agatcgaccg ccagccggcc gaagccatgg ccgccatcga gcaggccatc aacaaggcgc
    24001 tggatgaagt gcgagcgatc gtgcgcgact ggcagccgat gaaggacaag gcgctggcgc
    24061 tggccgacga cctgggcaag cgccagctgc cggtcgacga tgcctcgcgc aaggaagcac
    24121 aggaattcct gcgctgggcc gccgacaacc acttcacctt cttcggctac cgcgaatacc
    24181 gcgtcgagaa gcagggcaag gaagaggtgc tggcaccgct gaacgacacc ggcctgggcc
    24241 tgatgcgcgg caaggacaag tccgccgccc gtccggtcaa gacgctggcc gcgcagggcc
    24301 tgaacgccac ctccgggctg aaggacgcgc tgatcctgac caagaccaat gcccgttcgc
    24361 gcgtgcaccg cgccggttac atggactaca tcggcgtgct ggaattcgac gccaagggca
    24421 agatcatcgg cgagcagcgc ttcctcggcc tgttcacctc cagcgcctac aaccgtcgcc
    24481 cgtgggagat cccgctggtg cgccagcgcc acgagcacgt gatgaagcag tcgggcctgg
    24541 ccccggccag ccacagtggc aaggcgctgc gccacatcct ggaaaccctg ccgcgcgaag
    24601 agctgttcca gtccagcgag gacgaacttt tccgcactgc gatgggcgtg ctgggcctgc
    24661 aggagcgcgt gcgcagccgc ctgttcctgc gccgtgacaa gtacagccgt ttcatttccg
    24721 cactggtcta cctgccgcgc gagcgcttca acaccgacgt gcgcctgcgc atcgaagcga
    24781 tgctgaagga cgcgctgcac ggcgagtacg tcgacagttc ggtggtgctg ggcgaatcgc
    24841 cgctggccca ggtgcacctg atcgtgcgtc cgaagccggg tgaaatgctc gacgtcgata
    24901 ccgccgaact ggagcagaag ctggcccagg tgctgcgcaa ctggcaggac gacctgcgcg
    24961 aagcgctggt gacccgccac ggcgaaaccg aaggcctgcg catcgccgcc cgcatcggca
    25021 aggcgctgcc ggccggctac atcgaagaca acagcaccgc cgttgccgcc aacgatgtca
    25081 gccagctcga cgccctgacc ggcccggacg acctgcgcct gagcctgcag gcggtaccgc
    25141 gcgaaagcgg cgatggcctg cgcctgaagc tgtaccgcca gctggacgac atcccgctgt
    25201 cggacgcgct gccgatgatg gaaaacatgg gcctgcgcgt gatcgccgag cgtccgtacc
    25261 gcctgtcggt cgacaacgcc ccggtgtacg tgcaggactt cgaggtcgaa tcgaccgccg
    25321 gcgcgatcga tgccgccagc gtcgatgaag ccttcggcga gacgttcgcc cgcgtctggc
    25381 acggcgatgc cgagaacgac ggcttcaacc gcctggtgct ggctgccggc ctgcactggc
    25441 gccaggtcgc catgctgcgt ggctactgca agtacctgct gcagaccggc gtgccgttct
    25501 cgcaggcgta tgtggaaggc acctttgccc gctacccgct gctggcccgc ttgctggtcg
    25561 agctgttcga agcccgcttc gatccggcca ccggccacga gagcaaggac gacatcgccg
    25621 ccggccaggt gcagctgaag gcccacctcg atgtgctggc cgccggcgac gacgccaccc
    25681 tgaaggtact caagaccgtg gtcgacgccc gcaagggtga ccgcgaggcg cagatgcagg
    25741 ccgcgcgcga tgcgctgctg aagctgatgg accgtgtgtc cagcctggac gaagaccgca
    25801 tcctgcgttc gttcatgggc gtgatcgacg cgaccctgcg caccagctac taccagaccg
    25861 atgccaacgg ccagcacggc cacgtgatca gcttcaagtt cgattcggcg ctggtgccgg
    25921 acctgccgaa gccgcgcccg taccgcgaaa tcttcgtcta cggcccgcgc gtggaaggta
    25981 cccacctgcg cttcggcgcg gtcgcccgtg gtggcctgcg ctggtcggac cgtcgcgaag
    26041 acttccgtac cgaagtgctg ggcctggtca aggcgcagat ggtcaagaac accgtcatcg
    26101 tgccggtcgg cgcgaagggc ggcttcttcg ccaagacccc gccggtcaat ggtgaccgcg
    26161 acgcggtctt cgccaatggc gtggcctgct acaagctgtt catccagggc ctgctggaca
    26221 tcaccgacaa catcgtcaac aacaagatcg tgccgccggt ggatgtcgtg cgccacgaca
    26281 tggacgatcc gtacctggtg gtggccgccg acaagggcac cgcgaccttc tccgacatcg
    26341 ccaacggcct ggccatcgcg cacggcttct ggatgggcga tgcattcgcc tccggtggtt
    26401 cggtgggtta cgaccacaag ggcatgggca tcaccgctcg cggtgcgtgg gagtcggtca
    26461 agcgccactt ccgtgcgctg ggccgtgaca gccagaccca ggacttcacc gcggtcggcg
    26521 tcggcgacat gtccggcgac gtgttcggca acggcatgct gttgtcgcgc cacatccgcc
    26581 tggttgcagc cttcgaccac cgccacatct tcctggaccc gaacccggat gcggccacca
    26641 cgttcgtcga gcgtgagcgc ttgttcaccg tgccgcgttc gagctgggcg gactacgatg
    26701 ccaagctgat cagcaagggt ggcggcatct atccgcgcag cctgaagtcg atcgagatca
    26761 ccccgcaggt gcgtgaagcg ctgggcctgg acgagaacgt caaggcgctg tcgccgaacg
    26821 atctgatgag cgcgatcctg aaggcaccgg tcgacctgct gtggaacggc ggcatcggca
    26881 cctacgtcaa ggccgccagc gagcagcaca gcgatgtcgg cgaccgcgcc aacaacgccc
    26941 tgcgcgtgaa cggtggcgag ctgcgctgca aggtggtggg cgagggcggc aatctgggca
    27001 tgacccagct gggccgcatc gaagccgccc aggccggcgt gctgctcaac accgacttca
    27061 tcgacaactc ggccggtgtc gacacctccg accacgaagt caacatcaag atcctgctca
    27121 acgatgtggt gcgggccaag aagctgaccg tcgagcagcg caacaagctg ctggcctcga
    27181 tgaccgacga agtcgccgag ctggtgctca acgacaacta ccgccagaac caggcgctga
    27241 gcctgatgga gcggatggcg gtcaagcgcc tgggttccaa gcagcacttc atccgcaccc
    27301 ttgaacagca gggcctgctc gatcgccaga tcgagttcct gccgtccgat gccgagctgt
    27361 cgcagcgcaa ggcacgcggc cagggcctga cccgtccgga actgtcggtg ctgctgtcct
    27421 attccaagct ggtggcattc gcccagctgc tggattcgga catcccggaa gatccgtacc
    27481 tgtccaagga actgcagcgc tacttcccga ccccgctgca gaagaagtat gccgacgcga
    27541 tggagcgtca ccgcctgaag cgtgaaatca tcgccacggc cgtgaccaac cagaccatca
    27601 accgcatggg cgcgaccttc ctgatgcgca tgcaggaaga caccggccgt tccatcgccg
    27661 aggtcgccaa ggcctacacc atcagccgcg agacgctgga tgcccgcgcg ctgtgggcgc
    27721 agatcgatgc cctcgacggc aaggtgccgg agtcggtgca gatcgatgca ctggaagtga
    27781 tctggaagct gcagcgttcg ttcgtgcgct ggctgctgtc gcgcccgggc gcgatgccgg
    27841 gcatcaccga agcggtcaac cgctaccagg gtccgttcaa cgacatccgc gtcgcttcgg
    27901 gcgtgctgcc ggattcgcag cgtccgacct acgaagccct ggtggccgag tggaaggaaa
    27961 agggcctgcc gtccgcgctg gcgcagcagc tggccgaact gcacttcctg gagccggcgt
    28021 tcgacatcat cgaactggcg cgtacccgca agctgaagcc ggtggacgtg tccaaggtcc
    28081 acttccgcct gggcgacgcc ctgcagctgc cgtggctgtt cgagcaggtt gatgcgctgg
    28141 aggtcaacgg ccgttggcat gcggtggcac gtggcgtgct gcgcgacgag ctggcggcca
    28201 atcaccgcaa cctggccggc caggtgctgg gcaccaaggg cagcagcgct gaagccaagg
    28261 tcgcagcctg gatgggccgt gacgacaaca gcctgcgctt caccctggcg atgctggccg
    28321 aactggccga gcagaagacc ctggactacc cgaccgtctc ggtcgcggtg cagcgcctgg
    28381 gccagctggc cgcgcatg
//
LOCUS       DAOKIP010000032        28143 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.032,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000032 DAOKIP010000000
VERSION     DAOKIP010000032.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 28143)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 28143)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..28143
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.032"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            99..995
                     /gene="folP"
                     /locus_tag="QEL58_001223"
     CDS             99..995
                     /gene="folP"
                     /locus_tag="QEL58_001223"
                     /EC_number="2.5.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006453304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
                     /protein_id="HDS1675719.1"
                     /translation="MFDTSPQLDCAGRILRLDRVRVMGIVNVTPDSFSDGGAHDTTEA
                     AVAHGLKLVEEGADLLDVGGESTRPGAAPVSIEEELRRVIPVIEQLAARTTVPISIDT
                     FKPEVMRAAVAAGAGMINDIFGLRQDGALDAAAEAGVPVVLMHMQGEPGHMQADPHYD
                     DVVAEVHGFLVQRLFAAEMAGIPKKNLLVDLGFGFGKTTAHNMTLLARSERFLELGVP
                     MLAGLSRKRSLGELTGRDTPSERVAASVAAHLIAVQRGASIVRVHDVAATVDALKIWQ
                     AVDAVPAPRADATPTLRWPDED"
     gene            995..1948
                     /gene="miaA"
                     /locus_tag="QEL58_001224"
     CDS             995..1948
                     /gene="miaA"
                     /locus_tag="QEL58_001224"
                     /EC_number="2.5.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010484247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (adenosine(37)-N6)-dimethylallyltransferase
                     MiaA"
                     /protein_id="HDS1675720.1"
                     /translation="MGIDRRPLAIAVMGPTASGKTATAIALAQQLDGEIVSVDSALVY
                     RHLDIGSAKPDAAERAQAPHHLLDLREPWQTYSAAEFAADAGRVVADIVGRGKTPILA
                     GGTGLYFRALLQGLSPMPEADPAMREMLSAEAAERGWAALHAELAKVDPAAAARIHAT
                     DPQRIQRALEVYRLTGTPISEWQRRPGVAPLPVRTLKLILAPRDRAVLHQRIEARFDL
                     MLAQGFLDEVRALRAMPEMARVQAPLDLPAVRAVGYRQAWEYLDGEGDAARFRDKAIF
                     ATRQLAKRQLTWLRGELDARWFDPHIDNERLAGAVSTFVAR"
     gene            2045..2320
                     /gene="hfq"
                     /locus_tag="QEL58_001225"
     CDS             2045..2320
                     /gene="hfq"
                     /locus_tag="QEL58_001225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004152891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA chaperone Hfq"
                     /protein_id="HDS1675721.1"
                     /translation="MSKGQSLQDPFLNALRRERVPVSVYLVNGIKLQGTIESFDQFVV
                     LLRNTVSQMVYKHAISTVVPARNVKVGPGGGYVQSGEGGQAGDEADE"
     gene            2335..3645
                     /gene="hflX"
                     /locus_tag="QEL58_001226"
     CDS             2335..3645
                     /gene="hflX"
                     /locus_tag="QEL58_001226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014646716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase HflX"
                     /protein_id="HDS1675722.1"
                     /translation="MFDRSKKGEHALLIQPHFGKLEDDVLEEFGDLARSAGASIAATI
                     TARLDRPNPSTLIGSGKLDEIKAAADASGADLILVNHALSPGQERNLERFLERRVIDR
                     TGLILDIFAQRAHSHEGKLQVELAQLRHLATRLVRGWTHLERQRGGSIGLRGPGETQL
                     ETDRRLLQKRVEQLQKRLEKVEVQRTQMRRARVRSELPRVALVGYTNAGKSTLFNAMT
                     GAEAYAADQLFATLDPTVRRIAVPGGSVVLADTVGFVRDLPHDLVAAFRSTLSEAREA
                     DFLLHVVDAADPHREERIAQVDEVLTAVGAGDLPQLLVFNKIDRIDGADVRHDGQDGI
                     PDESRRERVWISARDGRGLDLLQAVLGKRLGLQHVTGELRLPPDAGRLRARLHQLEVI
                     RSEQADEEGWLLQVDLPIAEAEKLAASADGAPIRALLPEKLPEW"
     gene            3768..4262
                     /locus_tag="QEL58_001227"
     CDS             3768..4262
                     /locus_tag="QEL58_001227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CinA family protein"
                     /protein_id="HDS1675723.1"
                     /translation="MSIPTDADLNAQSAALGQRLQQASLQLVTAESCSGGWIAKCMTD
                     IAGSSAFFDCGMVVYSYEAKQRLLGVRAQTLEQFGAVSRETVLEMVSGALVNSGAGIA
                     VAVTGIAGPGGGSPDKPVGSVWIGWKRRGGYARAELFQFGGDREAIRRQTVAAALRGI
                     DAQL"
     gene            4297..5979
                     /gene="ubiB"
                     /locus_tag="QEL58_001228"
     CDS             4297..5979
                     /gene="ubiB"
                     /locus_tag="QEL58_001228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005416044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-polyprenylphenol 6-hydroxylase"
                     /protein_id="HDS1675724.1"
                     /translation="MWETLGTVRDLGRLQEIAVVLIRYGFGDVVRRIGLATTLERAGR
                     LLHWNEERQELLRMTAPVRVRSAMQDLGPTFVKLGQVLATRVDLLPPEWIAELSELQN
                     AVPALPYADIREQLEADLGASPTEVFAFLDETPMAAASLAQAHRARLHDGREVVLKVR
                     RPGIRDVVEADLRLLARLAEIVEARLPDLRRYRPAEVVQQFTVSLRRELDFAAECRNA
                     ERIARNFKGRGDILIPSVHWQWTCESLNVQDFVDGIPGRDLAGVDAAGLDRRELARRG
                     ADIVLKMVLEDGSFHADPHPGNIIYLRDGRIGVIDFGMVGALSEVRRFQVAQLLHGLV
                     EQDPQSVADVLLDWAGGVEVDENRLQHDISQFVDQYRGVPLKDLRIGLMLGDITQLLR
                     SYSLTLPADLALMIKAFLTLEGMGRQLDPDFDMASAARPFLERVVLQRYAPKALLKRG
                     RRSLLGLVDFAGELPRDLRKLVQAARRGRLQLKVETTALQGFGEQVNRAANRLVMGIV
                     TAALIIGSSIVMHSVGGVSSRWLLALGVCGFIGAGFCGVWILFSIWRSGKHT"
     gene            6166..6801
                     /gene="lexA"
                     /locus_tag="QEL58_001229"
     CDS             6166..6801
                     /gene="lexA"
                     /locus_tag="QEL58_001229"
                     /EC_number="3.4.21.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011269877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor LexA"
                     /protein_id="HDS1675725.1"
                     /translation="MDLTDTQQAILQLIAERIESEGAPPSQTEIARAFGFKGVRAAQY
                     HLEALEQAGAIRRIPGQARGIRLVQAPPVEKLAEPSLPDSVLRLPVLGRVAAGLPIGA
                     DIGSDDFVVLDRVFFSPAPDYLLKVQGDSMIDEGIFDGDLIGVHRTRDAHSGQIVVAR
                     IDDEITVKLLKIAKDRIRLLPRNPDYRPIEVLPDQDFAIEGLYCGLLRPNR"
     gene            7006..8043
                     /gene="recA"
                     /locus_tag="QEL58_001230"
     CDS             7006..8043
                     /gene="recA"
                     /locus_tag="QEL58_001230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005412937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecA"
                     /protein_id="HDS1675726.1"
                     /translation="MDENKKRALAAALGQIEKQFGKGSVMRMGDRVVEPVEAIPTGSL
                     MLDIALGIGGLPKGRVVEIYGPESSGKTTLTLQAIAECQKLGGTAAFIDAEHALDPIY
                     AGKLGVNVDDLLLSQPDTGEQALEIADMLVRSGSVDILVIDSVAALTPKAEIEGEMGD
                     QLPGLQARLMSQALRKLTGNIKRSNTLVIFINQLRMKIGVMMPGQSPETTTGGNALKF
                     YASVRLDIRRIGAIKKGDEIIGNQTKIKVVKNKLAPPFKQVITEILYGEGISREGELI
                     DMGVEAKLVEKAGAWYSYGEERIGQGKDNARGYLRDNPTVAAKLEAELREKFQPTEAA
                     REEGDDDGDDE"
     gene            8154..8645
                     /gene="recX"
                     /locus_tag="QEL58_001231"
     CDS             8154..8645
                     /gene="recX"
                     /locus_tag="QEL58_001231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination regulator RecX"
                     /protein_id="HDS1675727.1"
                     /translation="MSDSDDIPTGRKRRPREQTPVQRALGLLVRREHSRRELTRKLTA
                     RGIEDEAAQAAVAKLTEAGWQDDSRFAENLVRMRANTGYGPIHVRAELGTHGLDSAAI
                     AAAMDSYEGDWQENARDLVRRRFGEAGPQDLTQRRKAADLLARRGFDGDSIRRATRYD
                     PDD"
     gene            8755..11403
                     /gene="alaS"
                     /locus_tag="QEL58_001232"
     CDS             8755..11403
                     /gene="alaS"
                     /locus_tag="QEL58_001232"
                     /EC_number="6.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005412938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--tRNA ligase"
                     /protein_id="HDS1675728.1"
                     /translation="MNASAKFTTSQIRSDFLEFFKGKGHTIVPSAPLVPGNDPTLLFT
                     NSGMVQFKDVFLGAEKRSYVRAADVQRCLRAGGKHNDLDQVGYTARHHTFFEMLGNWS
                     FGDYFKKDAIAWAWELLTQVWKLPAERLLVTVYQTDDEAYALWRDMVGIPEERIVRIG
                     DNKGAPFASDNFWQMADTGPCGPCTEIFYDHGNHIAGGPPGSPDEDGDRFIEIWNLVF
                     MQFDRQPDGTLVPLPAPCVDTGMGLERLAAILQHVHTNYEIDLFQALIRKASELTGTA
                     DLENKSLRVIADHIRACSFLIVDGVLPSNEGRGYVLRRIIRRALRHGWMLGVRQPFFS
                     KLVPTLVEQMGEAYPELPAAVDTVTRALQAEEERFAETLDAGMKIFEDVAGKASNGVI
                     PGVDAFRLYDTYGFPLDLTQDIARERDLTVDIAGFDAAMEQQRETARAAGKFGGGVTL
                     PAELVATLSPTVFLGYDRLQADGLTVLALLKDGRPVQSADAGDAVIVITNQTPFYAES
                     GGQVGDTGVLTGNGVRLAVEDTQKFAGQFHGHVGTLSEGGLKVGDVLSGQVDGERRGA
                     TILNHSATHLLHAALREVLGTHVQQKGSLVAPDRLRFDFSHFQPISADELAVIERKVN
                     QQVRANNAAEVHTMAMQEALDFGAMALFGEKYGEHVRVLKMGDYSTELCGGTHVNRTG
                     DIGLFKITSEGGVSAGVRRIEAVTGQGALDYVDAEEARLAEAAELLGGSAGDVVEKIR
                     ALGQRQKQLERELEAVKAKVAAGATADLSGQAVEVAGVKVLAARLEGFDAKALRDAMD
                     RLKQQLGDAVIVLAGAQDGKAALVAGVNGSAMGKVKAGELLSHIAGQIGGKGGGRPDL
                     AQGGGEDGPALATALAAVVEWVSPRL"
     gene            11551..11754
                     /gene="csrA"
                     /locus_tag="QEL58_001233"
     CDS             11551..11754
                     /gene="csrA"
                     /locus_tag="QEL58_001233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004152909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon storage regulator CsrA"
                     /protein_id="HDS1675729.1"
                     /translation="MLILTRRVGETLMIGDSVSVTVLGVKGNQVRIGITAPKDVAVHR
                     EEIYQRIQRGDEAGGAGSENSAE"
     gene            11833..11925
                     /locus_tag="QEL58_001234"
     tRNA            11833..11925
                     /locus_tag="QEL58_001234"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:11867..11869,aa:Ser,seq:gct)
     gene            complement(12016..12465)
                     /locus_tag="QEL58_001235"
     CDS             complement(12016..12465)
                     /locus_tag="QEL58_001235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4189 domain-containing protein"
                     /protein_id="HDS1675730.1"
                     /translation="MNWKQAISLGVLLTITSGAGAASAITYDKDGRYGYSMNQHSLTT
                     AMQQSLHYCALQSRNCGQSASTTSEGYSAIATGTVALGFALGEKTADAAQRKAERMCR
                     ERANDCTLALLWRETPPRDLEPPQRPAAAAPAPATTPAAVPAIRSDH"
     gene            complement(12585..14915)
                     /locus_tag="QEL58_001236"
     CDS             complement(12585..14915)
                     /locus_tag="QEL58_001236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004152918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDS1675731.1"
                     /translation="MRRHLLAAAILFAVHTAHAADEPTLPTLQVEASKPSRIDSRVTV
                     DNPQAQNRTLGGLLEHVSGVQNSAFGPNAGAPVIRSLSGNRVQILQDGQSILGMNAIS
                     GDINIPFDPLFVRSVTVNKSSDTVRYGGNAIGGSVEVDSGLISRSMEDKDQSMELVLR
                     KGFNAADAQGFRMNFNNQRNISTNLQVSRQRISHYDIPGNSKASVCNTRLFPATGGVN
                     SALADSCQKEARVQQIYNKASQPYIDQFMTENPDWADGDFSFYTNNPTSVWQRRTYIN
                     PVNPAYVPGTPSYVQKQINNDVTPDYHHRLGNSYSRNSQVAAGSTLFFDRGYVGVSID
                     AKDSEYGVPGFSMQNLSFGSNYADGLPVGVVIKQQRYALEALLRDPLPYFERAELRVS
                     KLDNTSGERLGASKANDYDFESIQAELLLSHQRVGPLSGMLGLSHQSRDVTGSGSLRY
                     LPDVDTRSNAVFLKETLDFGWATFDAGVRHERVDHTLQPSRFKTARNAANTKLQDRDY
                     RLNSYSLGSYVELGPLFAAKVRYSSSQRAPEINELYASNAHYSVMTQEEGNQNLEPER
                     AKNLELTGLFHLGGFELSATAYRMKYQNYLYLGYSGLQTANRLPLKYWKQTDTTVKGF
                     EIDASQALDLGRYGTLNVSAFADLVKNKADHPDALRAHNDGEYLPNMPTNRYGANLQW
                     QRQDWKAQLSSTYYGKQKYLGRNVSEEIPLDAFNLVDLQVSRELPVRNSYIAGMEVFV
                     NGSNLLNEEARPHNSPLKYIAPLPGRGFQVGVTVRL"
     gene            15060..15989
                     /locus_tag="QEL58_001237"
     CDS             15060..15989
                     /locus_tag="QEL58_001237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDS1675732.1"
                     /translation="MHALTLADLDYLGRHSGFRYRLPEPLAVAGESCVVEGRVEQRCL
                     RPGLTLALSDVVAHQAFEAISEVPPAFSAIVMLEGRAGARLSGQAQIGMRPGAGARIL
                     ADAAPMTAIHPAGQRMRSLNVSLDASAPLDDPVINELLSAHRSDGRPLHSWQVPAHLG
                     HAADQLLSGVWDGAMHALLCEGVGLQMLALSLGAPARNAALELGVSARDRRMLQRVID
                     CLQAAPAADHSLDDLARVACMSPSSLRLKFLQVYRCSVFAWLREHRLQRACEQLRQGC
                     SVQQAAHFAGYRHATNFATAFRARYGIAPSRFR"
     gene            16101..18272
                     /locus_tag="QEL58_001238"
     CDS             16101..18272
                     /locus_tag="QEL58_001238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent siderophore receptor"
                     /protein_id="HDS1675733.1"
                     /translation="MPACFRPCALATAIGTTLALFNAAHAAEREPAATASQLPTVQVT
                     ADLDGSTESSRSYTTNSMGTATGLSLTSRQTPQSVSVVTHQQIEDRALLSTADALATA
                     PGISVTRSDANRYSFSARGFEIDNYQFDGVVMPVLSPWNFGENNLDMVVYDRIEVVRG
                     ANGLMTGAGNPSAAVNYVRKRPLREFAASAGIGLGSWDARRAWADVSSPLSREGRIRG
                     RLVAAKAEADSYTAGLDSTAKTLYGVVSVDLGEDTGLIAGISYQGNDNRGFGSGFALF
                     NADGTRTAFDRSVSATAPWARMSTDTRNGFFDFNHRFGNDWQARVSYSRSHTDMEMKH
                     LYRGGYPDPVTGAMPNGNSFTRYDGPVRREAVSASLSGPFQLFGRQHTASIGWSRSRD
                     EIALGQYRALAPLPPLASYLDWHGPGTPEPVWASSKTQADDLDNHQSGAYAVARLSLA
                     DPLHVIVGARLSNWETDQVYFGSKRKYRYRNEFVPYAGLVWDLNGYSSIYASYTGIFK
                     PQNNRDASGQILDPVSGRSYELGLKGSWLQERLNASAALFRTRQDNLAEATGGLVEGS
                     TQAAYRAVKGATVDGLELELAGEPLPGWSLGTSFTTFIAQDAQGRAINTAKPRSLFKL
                     FTTWRLPGTWDRLTLGGGVDWQNRMYQTATAPGNRRVPVEQPGYALVNLMARYQFSSN
                     LSAAVNINNLFDRHYYSQIGFYNQGWYGAPRNVMFTVKVGY"
     gene            18396..18878
                     /locus_tag="QEL58_001239"
     CDS             18396..18878
                     /locus_tag="QEL58_001239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014646723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LuxR family transcriptional regulator"
                     /protein_id="HDS1675734.1"
                     /translation="MKLLSAVLLSALSLPAASALAMEASPSPLLGRWSLDIATSALPE
                     AQRPKQVVLEFKDAGSGRWSSHVDIVLHDGKTMKSDGTLALDGTPGALSGTYGADKAN
                     LKLPAPNTLVMQLVDHGTPASTRIYTVADDRATMTETKAFYGHDGTPILQTNLFKRLP
                     "
     gene            complement(18935..21610)
                     /gene="aceE"
                     /locus_tag="QEL58_001240"
     CDS             complement(18935..21610)
                     /gene="aceE"
                     /locus_tag="QEL58_001240"
                     /EC_number="1.2.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase (acetyl-transferring),
                     homodimeric type"
                     /protein_id="HDS1675735.1"
                     /translation="MNQAPIPFDTDPLETREWRESLEAVMQAGGRPRAQYLIDQLSEL
                     DAQQHGDLHTRAWTAYVNSIPPERQPAYPGDLAIERRLNAMIRWNAMVMVLRAGRHSN
                     VGGHIATYQSAAVLYDVGFDHFFRGRTDTFDGDMIYIQGHSAPGIYGRAYVEGRIDPQ
                     RMDNFRREAGREGLSSYPHPRLMPEFWQFPTVSMGLGPLTAAYQARYMRYLEYRGLKE
                     HQGRKVWAFLGDGEMDQPESQAAISLAGRERLDNLVFVVNCNLQRLDGPVRGNGKVIQ
                     ELEGTFRAAGWNVIKLIWGSGWDDLLARDHSGLLRQRMMECVDGDYQTFKSQNGAYVR
                     EHFFGRYPELLELVAHMSDDDIWALARGGHDPQKVYAAYQQAVNTSGRPTVILAKTVK
                     GFGMGEAGEGQNINHQLKKMSADAVRAFRDRFNLPVSDEQLEEMPYLRPEPGSAEALY
                     FAERRRIQGGQLPARLARVDPLPLPPLSIFNSQLQGSGDRGQSTTMGFVRILTSLLKD
                     PELGRLVIPIVPDESRTFGMEGLFRQIGIHSYLGQLYTPQDAGQLSYYKEARDGQILQ
                     EGINESGAICSWIAAGTAYSNHGLATIPFYIFYSMFGLQRVGDLAWAAADARTRGFLL
                     GATSGRTTLMGEGLQHDDGHSHVLSSVIPSCVSYDPTFNYELAVIIHDGLRRMYVDQE
                     DIYYYITVLNENYPHPALPEGAEAGILKGLYLLHPAPSERGTSQLRVQLMGSGSILRE
                     VEAAAELLQQDFGIASDVWSATSLTELRRDGLAAERWNLLHPAAELRVPYVQQCLQGH
                     EGPLVVATDYMKIVGDQIRPFINDRRFTALGTDGFGRSDTRESLRTFFEVDRHFIVLA
                     ALKALAEEGRIERSRLQEAIDRYGIDTGKPDPAAV"
     gene            21885..22400
                     /locus_tag="QEL58_001241"
     CDS             21885..22400
                     /locus_tag="QEL58_001241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HDS1675736.1"
                     /translation="MNSVRIWEKSYELRRRLLRGFFLRRGSASEDAEDLAQEVYLRLL
                     RTTGEDAAAIENPEAYLFTVAANLAREHARSRSTLPPLEDVDLLAEVLKSEEDIEGEF
                     ERAQRWNDIRSAIVQLPTTTRRVMELHYRDGLDCPAISQQLQVSVHMVRKHIGKGLEA
                     CRKALGARERT"
     gene            22397..23422
                     /locus_tag="QEL58_001242"
     CDS             22397..23422
                     /locus_tag="QEL58_001242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014036766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FecR domain-containing protein"
                     /protein_id="HDS1675737.1"
                     /translation="MNRHPSDVADDGISREAMDWFLCNREGTLSEAERAAFLEWMKRS
                     PEHVRAYMRALALYRQVDEALQSPLPEEVLAPPLKAASAKVVPLFGSVPEPLRSVPRR
                     HRARWLGLAVAACAALLGVGLLPLLMPAEQMYSADHGELLDLVLADQTQVQLNADSRL
                     RVRMGWFSRKVELLQGEATFDIAHDRRPFKVQVNGLEIRDIGTVFDVSRRLQGTRIGV
                     VSGEVEVWSQGAGARRLAQLDGGRVVQVDTRSHAVESLDMPLSMLLDWQQRKVSFLDE
                     RLDEVAAAFNRHNQVQVRVLDEGAASARLSGSLDAHRIGALQAFLERDPRFVVRREGD
                     TVRVGSR"
     gene            23562..26495
                     /locus_tag="QEL58_001243"
     CDS             23562..26495
                     /locus_tag="QEL58_001243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010484268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDS1675738.1"
                     /translation="MRNTLYLSIVLALSPCSMPVALAAGADGLEAPVSAPIAAQPLSR
                     ALEQLSRSSGVQFLYSAGGDARMAGAVPRGATVRQALDALLAGTGLGYTVVDGNVIAI
                     DPAPARTAPKPAAPKPREAEAVVAPTLDTVKVIAAHEVIDQKKTSPVIKDSVVYDEMD
                     SYGDETLAESLMAAPGLSAVEDAGEPRYVTVRGVQANLNYTTIDGIAIASVGGSGSGE
                     RMNNLQLIPSDIGTRTDIYKSFSAEQAPDAIGGVIDIISRSAFDRSGKYVFADVAGIH
                     STAETHVERSAGGNHETLGHFGKSAKMVFSNQFGADQQFGIVAVARYEQRSRNSVKRW
                     VESNYYYNDAGKYLTDGTTGPDEAKGWNGLRAPGNFSTGTYTNFITNFGGSAKLEWKP
                     SDDPFYASLLLYSYRFYENSTMNKTDLYGNAKFPIRNQTEDSGTTQINSIYIKNRHDR
                     WDRNNRGAIASFNWDIGDRSRLTLRGGHTEETFHNSQVYWGVRAYPSNLFVDYENDSH
                     GFPNAVGVSDSSLLTSSAFKLNPAQAYVSPRDAKETIDNLRADFSYNIDADARGFGLA
                     AGAEYRHLKIWQDIDFDYYKSSATLNDYLYPGSTLLGSVPGFPLIDNRKWNDELFPKL
                     GSNNAAYPNANFTSDYKYVEDIGNAYVSAHYAWDRLLLIGGLRYDHTTFDAFSPFSND
                     GGTTYTSAFRTTGGGYNNLLPSLNATFKLSDDQRLRFSASRTLGRPTPSNIAQATSTS
                     CGDDEEGRGFCTIKQGNANLQPRRSTNIDLAWDLYFNGNNGLVSVALFDKVIKDDIYT
                     LTTFENVGDTRYRVSQPMNTDESKLRGIEFAVANRNLQRGRHRFDMYFNATRLEGQTN
                     YRISDGSERRLDRLLYQPDWSLNGSVIWRMPWKSAQLRLSGTYRSRMLVDFGDTEWLD
                     SYYDPYMTFNMAFSHKVSRHVTLKYEAKNLFNTQPTYSTGPNGRFRTEIDDYGRFFYF
                     HIIYN"
     gene            26506..28101
                     /locus_tag="QEL58_001244"
     CDS             26506..28101
                     /locus_tag="QEL58_001244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005412948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase D family protein"
                     /protein_id="HDS1675739.1"
                     /translation="METINRRRFLALAGLSAAGAWMGTAHALAAQADATALNPRNLLA
                     SPHFASTPFTLGVASGDPSADGMVLWTRLATEPLVFGGGMPTRPMVVEWQLAADDGMR
                     KVVRQGSAMAHPELGHAVHVELEGLAPGRPYWYRFTVGGHASAVGCTRTLPAVTAAVD
                     RVRFAVAGCQHYEEGHYTAWRRIAEEPLDFVFHYGDYIYEGESQPGQRRMNGQPFTNL
                     RNHVGPQTYTLDDYRRRYAQYKSDADLQAAHASAPWFVTFDDHEVDNNWAGAEDQDDT
                     PSEVFLLRRAQAFQAYYENMPLRRSAFPREGHMQLYRRARYGTLMDLHLLDTRQYRSK
                     QVNMALREEVESPKRSIVGAKQERWLFDGLADAAPRWHTIAHQVALGNYMREKDGVVQ
                     SSDDQWSGYLDSRRRLLEHIQKVGFGNVVTACGDAHRHYASDLVQDHRDSGVVSSEFL
                     ATSITSGADGQGVDAYAENQLRHSPHLKATTDKRGYVLCDVTRHAWIGDMKTLDSVMQ
                     PNGTVQSWRRYAVEHGRPGLQEA"
BASE COUNT         4799 a         9059 c         9476 g         4809 t
ORIGIN      
        1 gctgttgctc cggccgttgc tgtcgctctg gcctctgcgg gtgcagggcg gcgccctgcc
       61 gaactaaact acccgccgtt gtccctgcag gattgcccat gttcgatacc tcgccccagc
      121 tcgattgcgc cggccgcatc ctgcgcctcg accgtgtccg ggtcatgggc atcgtcaacg
      181 tcaccccgga ctcgttctcc gacggcggcg cgcacgacac caccgaggct gcggtcgcac
      241 atggcctgaa gctggtcgag gaaggcgccg atctgctcga cgtcggtggc gaatccaccc
      301 gcccgggtgc tgccccggta tcgatcgagg aagaactgcg acgtgtgatt ccggtaatcg
      361 agcagctggc cgcccgcacc acggtgccga tcagcatcga caccttcaag ccggaggtga
      421 tgcgcgcggc ggtggccgcc ggtgccggca tgatcaacga catcttcggc ctgcgccagg
      481 acggcgcact cgatgccgct gccgaggcgg gcgtgccggt ggtactgatg cacatgcagg
      541 gcgagccggg tcatatgcag gccgatccgc attacgacga cgtggtcgcc gaggtgcacg
      601 ggttcctcgt gcagcgcctg ttcgctgcgg aaatggccgg cattcccaag aagaacctgc
      661 tggtcgatct cggcttcggt ttcggcaaga ccaccgcgca caacatgacc ctgctggcgc
      721 gctcggagcg cttcctggaa ctgggtgtgc cgatgctggc cgggctgtcg cgcaagcgca
      781 gtctcggtga actgaccggt cgcgacacac cgtcggaacg ggtggcggct tcggtggctg
      841 cgcacctgat cgcggtgcag cgcggcgcga gcatcgtgcg cgtgcatgac gtggccgcca
      901 ctgtcgatgc gctgaagatc tggcaggcgg tcgacgccgt gccggcaccg cgcgccgacg
      961 ccacgccgac cctccgctgg ccggacgaag actgatgggc atcgaccggc ggccattggc
     1021 gatcgccgtg atggggccga cggccagtgg caagacggcc acggccattg ccctggcaca
     1081 gcagctggat ggcgagatcg tcagtgtcga ttcggcgctg gtgtaccggc acctggacat
     1141 cggttcggcc aagcccgatg ccgccgaacg cgcgcaggcc ccgcatcacc tgctggacct
     1201 gcgcgagccc tggcagacct attcggcggc cgagtttgcc gccgatgccg gccgtgtcgt
     1261 ggccgatatc gtggggcgcg gcaaaacgcc gatcctggct ggtggcaccg gcctgtactt
     1321 ccgcgccctg ctgcagggct tgtcgccgat gcccgaagcc gacccggcaa tgcgcgaaat
     1381 gctcagtgcc gaagcggccg agcgtggctg ggcggcgctg catgccgagc tggccaaggt
     1441 cgatccggcc gcggctgccc gcatccatgc caccgacccg caacgcatcc agcgggcgct
     1501 ggaggtctat cgcctgaccg gtacccccat ctcggaatgg cagcgccggc cgggcgtggc
     1561 gccgttgccg gtgcgcaccc tcaagctgat cctggccccg cgtgaccgcg cggtcctgca
     1621 ccagcgcatc gaggcccgct tcgatctcat gctggcacag ggcttcctcg acgaggtgcg
     1681 ggcactgcgc gcgatgccgg aaatggccag ggtgcaggcg cccctggacc tgcctgcggt
     1741 acgtgcagtc ggctaccgcc aggcctggga atacctggac ggggaggggg atgccgcccg
     1801 tttccgtgac aaggcgatct tcgccacccg ccagctggcc aagcgccagc tgacctggct
     1861 gcgtggcgaa cttgatgcgc gctggttcga cccccatatc gacaacgagc gcctggccgg
     1921 cgcggtgtcg accttcgtcg cacgctgaac ccccgccagc cgtgtaacat cattggacgg
     1981 cgggcggctc gggggccgtg gcaaccgtcg gcaacccaat aagaacaata atcaggagtg
     2041 tgcaatgtcc aaggggcaat cgctgcagga tcctttcttg aatgcactgc ggcgcgaacg
     2101 cgtgccggtt tcggtgtacc tggtgaacgg catcaagctg cagggcacga tcgagtcgtt
     2161 cgaccagttc gtggtcctgc tgcgcaacac ggtcagccag atggtctaca agcacgccat
     2221 ttccacggtc gtcccggcac gcaatgtgaa ggtcggtccg ggcggtggtt acgtgcaatc
     2281 gggtgaaggt ggtcaggcag gtgatgaagc agacgagtaa taccggagcg gtgaatgttt
     2341 gaccgctcga aaaagggcga acacgccctg ttgatccagc cgcatttcgg caagctggaa
     2401 gatgatgtgc tggaagagtt cggtgatctg gcccgctcgg ctggggccag catcgccgcg
     2461 acgatcaccg cgcgtctgga ccgtcccaat ccgtcgaccc tgatcggcag cggcaagctg
     2521 gacgagatca aggcggcggc cgatgccagc ggcgccgacc tgatcctggt caaccatgcg
     2581 ttgagcccgg gccaggagcg caacctggaa cggttcctgg agcgccgggt gatcgaccgg
     2641 accggcctga tcctggacat ctttgcgcag cgtgcgcaca gccacgaagg caagctgcag
     2701 gtcgagctgg cgcagctgcg tcacctggcc acgcggctgg tgcgcggctg gacccacctt
     2761 gagcgccagc gcggcggctc gatcggcctg cgtggcccgg gtgaaaccca gctggaaacc
     2821 gaccgccgcc tgttgcagaa gcgggtggag cagctgcaga agcgcctgga gaaggtggaa
     2881 gtgcagcgca cccagatgcg ccgtgcgcgc gtgcgcagcg aactgccgcg cgtggccctg
     2941 gtgggctaca ccaacgccgg caagtcgacc ctgttcaacg ccatgaccgg cgccgaggcc
     3001 tacgccgccg accagctgtt tgccacgctg gacccgaccg tgcgccgcat tgcggtccca
     3061 ggtggcagcg tggtgctggc cgataccgtt ggctttgtcc gcgatctgcc gcatgacctg
     3121 gttgccgcgt tccgctcgac cctgtctgag gcgcgcgaag ccgatttcct gctgcacgtg
     3181 gtggatgccg ccgatccgca tcgcgaggag cgcatcgccc aggtcgacga ggtgctgacc
     3241 gcggtaggtg ctggtgatct gccgcagctg ctagtgttca acaagatcga ccgcatcgac
     3301 ggtgccgacg tccgtcacga tggccaggac ggtattcctg atgaatcgcg acgcgagcgg
     3361 gtatggattt ccgcgcgtga cgggcggggc ctggacctgc tgcaggcagt gctgggcaag
     3421 cgcctgggcc tgcagcacgt gaccggtgaa ctgcgcctgc cgccggacgc cggacgcctg
     3481 cgcgcgcgcc tgcatcagct ggaagtgatc cgcagcgagc aggccgatga agagggctgg
     3541 ctgctgcagg tggacctgcc gatcgccgaa gccgagaagc tggctgccag tgccgacggc
     3601 gcgccgatcc gcgccctgtt gccggaaaag ctgccggagt ggtgaggtag cgaccaaggc
     3661 ccggtagtgc cggccgctgg ccggcagcgc aaccgtgccg ccggcccgcg acatcaacct
     3721 gtcatctgcg gtacaacgtg caggttcttc accccaccgt catgccgatg tccatcccca
     3781 ccgacgccga tctcaacgcc cagtccgccg cgctagggca gcgcctgcag caggcctcgc
     3841 tgcagctggt gaccgctgaa agctgcagcg gtggctggat cgccaagtgc atgaccgata
     3901 tcgccgggtc gtcggcgttc ttcgactgcg gcatggtggt ctacagctat gaagccaagc
     3961 agcgcctgct cggcgtgcgc gcgcagaccc tggagcagtt cggtgcggtc agccgcgaga
     4021 cggtgctgga aatggtctcc ggtgccctgg tcaattccgg tgccggcatt gcggtggcgg
     4081 tgaccgggat cgccggcccc ggcggcggca gcccggacaa gccggttggc agcgtctgga
     4141 tcggctggaa gcgccgtggc ggttacgccc gcgccgagct gttccagttc gggggtgacc
     4201 gcgaagccat ccgccggcaa accgtagcgg cggcattgcg cggtatcgac gcccagctgt
     4261 gacatgctgc tccggtaatc gtccggagca cgcatgatgt gggaaacgct gggcacagtc
     4321 cgtgacctgg gccgactgca ggaaattgct gttgtcctga tccgttatgg cttcggcgac
     4381 gtggtgcggc gcatcggcct ggccaccacg cttgaacggg cagggcgcct gctgcactgg
     4441 aacgaggagc ggcaggaact gctgcggatg acggcgccgg tgcgcgtgcg cagcgcgatg
     4501 caggatctcg gcccgacctt cgtcaagctc ggccaggtgc tggcgacccg tgtcgacctg
     4561 ctgcctccgg aatggatcgc cgagctctcc gaactgcaga acgcagtgcc ggcgttgccg
     4621 tacgcggaca tccgcgagca gctcgaggcc gaccttggcg cgtcgcccac ggaggtattc
     4681 gctttccttg atgaaacccc gatggccgcc gcctcactgg cacaggccca tcgtgcgcgc
     4741 ctgcatgacg gtcgcgaggt ggtgttgaaa gtacgtcgcc ccggcatccg cgatgtggtc
     4801 gaggccgacc tgcggctgct ggcacgcctg gccgagatcg tcgaagcccg cctgccggac
     4861 ctgcgccgct atcgtccggc cgaggtggtg cagcagttca ccgtgtcact gcgccgcgag
     4921 ctcgatttcg ccgccgaatg ccgcaacgcc gagcgcatcg cgcgcaattt caagggccgc
     4981 ggcgacatcc tgattcccag cgtgcactgg cagtggacct gcgagagcct gaacgtgcag
     5041 gacttcgttg acggcatccc cggccgcgac ctcgccggcg tcgatgcagc ggggctggac
     5101 cgccgcgaac tcgcacggcg cggcgccgac attgtgttga agatggtgct ggaggacgga
     5161 agcttccacg ccgacccgca ccccggcaac atcatctacc tgcgcgacgg gcgcatcggc
     5221 gtgatcgatt tcggcatggt cggcgcgctg tcggaagtgc gtcgcttcca ggtcgcacag
     5281 ttgctgcacg ggctggtcga gcaggacccg cagagcgtgg ccgacgtgct gctggactgg
     5341 gccggtgggg tggaggtgga tgagaaccgg ctgcagcatg acatcagcca gttcgtcgac
     5401 cagtaccgcg gtgtgccgtt gaaggacctg cgcatcgggc tgatgctggg cgacatcacc
     5461 cagctgctgc gcagctatag cctgaccctg ccggccgacc tggcgctgat gatcaaggcg
     5521 ttcctgaccc tggaaggcat gggccgccag ctggatccgg atttcgacat ggccagcgcc
     5581 gcgcgcccat tcctggagcg ggtggtgttg cagcgctatg cgccaaaggc gctgctcaag
     5641 cgcggccggc gcagcttgct ggggctggtg gattttgccg gcgaactgcc gcgcgacctg
     5701 cgcaagctgg tgcaggccgc ccgccgtggc cgcctccagc tgaaggtgga aaccacggca
     5761 ttgcagggtt tcggcgaaca ggtgaaccgc gcggcgaacc ggctggtgat gggcatcgtc
     5821 accgccgccc tgatcatcgg ctcgtcgatc gtgatgcaca gcgtgggcgg cgtctccagc
     5881 cgctggctgc tggcgctggg cgtgtgcggc ttcatcggcg ccggtttctg cggcgtctgg
     5941 atcctgtttt cgatatggag aagcggtaaa cacacatgag tgtgtttacc gctgaatcgc
     6001 gcagcgattc ctgtagagcc gaccgttggt cggctgcttt tgcctttacc cgccgggcca
     6061 tgccctgcga cggttgcgga ccatgcctcg gtcccgcagg taggtgtcac ctcctgtcgc
     6121 acccggcact tgcagatctg aacgttagta gtaatactac taaccatgga cctgaccgac
     6181 acccagcagg cgatcctgca gttgatcgcc gagcgtatcg agagcgaagg cgcaccgccg
     6241 tcgcagactg aaatcgcacg tgcgttcggc ttcaagggcg tgcgcgcggc ccagtaccac
     6301 ctggaagccc tggagcaggc cggcgcgatc cgccgcatcc caggccaggc ccgcgggatc
     6361 cgcctggtgc aggccccgcc ggtcgagaag ctggccgagc cgagcctgcc cgacagcgtg
     6421 ctgcgtctgc cggtgctggg ccgggtggcg gccggcctgc cgatcggtgc cgatatcggc
     6481 tcggacgatt tcgtggtgct ggatcgcgtg ttcttctcgc cggcgccgga ctacctgctg
     6541 aaggtgcagg gcgattcgat gatcgacgag ggcatcttcg acggtgacct gatcggcgtg
     6601 caccgtaccc gtgacgccca ttccgggcag atcgtggtag cccgcatcga tgacgagatc
     6661 acggtcaagc tgctgaagat cgccaaggac cgcatccgcc tgctgccgcg caaccccgat
     6721 tacaggccga ttgaagtgct gccggatcag gactttgcga tcgaaggcct ctattgcggc
     6781 ctgctgcgcc ccaaccgttg acccgttccg cattgcattt ccccgcggtc ttttgtggcg
     6841 attctctggt tccactgagg ttggtacgga tgtccgataa ttcttttcag agcgccgggc
     6901 agaatctcag cctgtgcgat acgtccgact taaagtgagc ccatggcaaa gaagaccccc
     6961 aaagacagca cctccaacga catcacctct gcaaggaccc aaccgatgga cgagaacaag
     7021 aagcgcgccc tcgctgcagc tctgggccag atcgagaagc agttcggcaa gggctcggtg
     7081 atgcgcatgg gcgaccgcgt ggtcgagccc gtcgaagcca tcccgaccgg ttcgctgatg
     7141 ctcgacatcg cactgggcat tggcggcctg ccgaagggcc gtgtcgttga gatctacggg
     7201 ccggaatcct cgggcaagac cactctgacc ctgcaggcca tcgccgaatg ccagaagctg
     7261 ggcggcacgg cggccttcat cgacgccgag catgcactgg acccgatcta cgccggcaag
     7321 ctgggcgtga acgtggatga cctgctgctg tcgcagccgg ataccggtga gcaggcgctg
     7381 gaaatcgccg acatgctggt ccgttcgggc tcggtggaca tcctggtgat cgactcggtc
     7441 gccgcgctga ccccgaaggc cgaaatcgaa ggcgagatgg gcgaccagct gccgggcctg
     7501 caggcccgcc tgatgagcca ggcgctgcgc aagctgaccg gcaacatcaa gcgctccaac
     7561 acgctggtga tcttcatcaa ccagctgcgc atgaagatcg gcgtgatgat gccgggccag
     7621 agcccggaaa ccaccaccgg cggcaacgca ctgaagttct atgcctcggt ccgtctggac
     7681 atccgccgca tcggcgcgat caagaagggc gacgagatca tcggcaacca gaccaagatc
     7741 aaggtcgtca agaacaagct ggcaccgccg ttcaagcagg tcatcaccga gatcctgtac
     7801 ggcgagggca tcagccgcga aggcgaactg atcgacatgg gcgtggaggc caagctggtc
     7861 gagaaggccg gcgcctggta cagctacggt gaggaacgca tcggccaggg caaggacaac
     7921 gcccgcggtt acctgcgtga caacccgacc gtcgccgcca agctcgaagc cgagctgcgc
     7981 gagaagttcc agccgactga agccgcccgc gaggaaggcg acgacgacgg cgacgacgag
     8041 taaggcttgc tgtggggcag ggcggcgccg tcagtgacgt cgccctgcct cgcaggttcg
     8101 aatcgcccag ggatgggcag ggcgccacgg acggcgccac ccttggagca ccgatgtccg
     8161 actccgacga tattcccacc ggccgcaagc gccggccccg tgagcagacg cccgtgcaac
     8221 gcgcgctggg cctgctggtc cgccgtgagc attcgcgcag ggagctgacc cgcaagctga
     8281 ccgcccgtgg catcgaagac gaagccgcgc aggctgccgt ggccaagctg accgaggcgg
     8341 gctggcagga cgacagccgt tttgccgaga acctggtgcg gatgcgcgcc aacaccggct
     8401 acgggccgat ccatgtccgc gccgagctgg gcacccatgg gctggacagt gctgcgattg
     8461 cggcggcgat ggacagctat gagggcgact ggcaggaaaa cgcccgtgac ctggtccgcc
     8521 gccgcttcgg cgaggctggc ccgcaggacc tgacgcagcg gcgcaaggcc gccgatctgt
     8581 tggccagacg tggctttgac ggcgacagca tccgccgcgc gacccgctac gacccggatg
     8641 actgagactg gcggcgccgg gcctgataac ctttaggttt tcggcggtcc cttgcgaccc
     8701 tggccaatgt ggccggtggt ccgggttcgc cggcccgcag actgccagcc ctcaatgaac
     8761 gcatccgcca aattcacgac ctcccagatc cgcagcgatt tccttgaatt cttcaagggc
     8821 aaaggccaca ccatcgtgcc gtcggcgccg ctggtgccgg gcaacgatcc gaccctgctg
     8881 ttcaccaact ccggcatggt gcagttcaag gacgtgttcc ttggcgcgga gaagcgcagc
     8941 tacgtgcgcg cggccgacgt ccagcgctgc ctgcgggcgg gcggcaagca caacgacctc
     9001 gaccaggtgg gttacaccgc acgccaccac accttcttcg aaatgctggg caactggtcg
     9061 ttcggcgact acttcaagaa ggacgcgatt gcctgggcct gggagctgct gacccaggtc
     9121 tggaagctgc cggccgagcg cctgctggtc accgtctacc agaccgacga cgaggcttac
     9181 gcgctgtggc gcgacatggt cggcattccg gaagagcgca tcgtgcgcat cggtgacaac
     9241 aagggcgcgc cgttcgcctc ggacaacttc tggcagatgg ccgacacggg tccgtgtggc
     9301 ccgtgcaccg agatcttcta cgaccacggc aaccatatcg ccggcggccc cccgggctcc
     9361 ccggatgagg acggcgaccg cttcatcgaa atctggaacc tggtgttcat gcagttcgac
     9421 cgccagcccg acggcaccct ggtgccgctg ccggcgccgt gcgtggatac cggcatgggc
     9481 ctggagcgcc tggcggcgat cctgcagcac gtgcatacca actatgagat cgacctgttc
     9541 caggcgctga tccgcaaggc gtcggagctg accggcaccg ccgacctgga gaacaagtcg
     9601 ctgcgcgtga tcgccgatca catccgcgcc tgttcgttcc tgatcgtcga cggcgtgctg
     9661 ccctccaatg aaggccgcgg ctacgtgctg cgccgtatca tccgccgcgc cctgcgccat
     9721 ggctggatgc tgggcgtgcg ccagccgttc ttcagcaagc tggtgccgac cctggtcgaa
     9781 cagatgggcg aggcctatcc ggaactgccg gcggcggtgg acaccgttac ccgtgcgctg
     9841 caggccgagg aagagcgttt cgctgaaacc ctcgacgccg gcatgaagat cttcgaggac
     9901 gtggctggca aagccagcaa tggcgtgatc ccgggcgttg acgccttccg cctgtacgac
     9961 acctacggtt tcccgctcga cctgacccag gacatcgccc gcgagcgtga cctgaccgtc
    10021 gacatcgccg gcttcgatgc cgcgatggag cagcagcgcg agaccgcgcg tgcggccggc
    10081 aagttcggcg gcggcgtgac cctgccggcg gagctggtag ccaccctcag cccgaccgtg
    10141 ttcctgggct atgaccgcct gcaggccgat ggcctgaccg tgctggcgct gctcaaggac
    10201 ggtcgtccgg tgcagtcggc cgatgccggt gatgcggtca tcgtcatcac caaccagacc
    10261 ccgttctacg ccgaatccgg cggccaggtc ggcgacaccg gcgtgctgac cggcaacggc
    10321 gtgcgcctgg cggtggaaga tacccagaag ttcgctggcc agttccatgg ccacgtcggc
    10381 acgctgtccg aaggtggcct gaaggttggc gacgtgctgt ccggccaggt tgacggcgag
    10441 cgtcgcggcg ccaccatcct caaccactcg gcgacccacc tgctgcacgc cgccctgcgc
    10501 gaagtgctgg gcacccatgt gcagcagaag ggctcgctgg tcgcgccgga ccgcctgcgt
    10561 ttcgacttct cgcacttcca gccgatcagc gctgatgagc tggcggtgat cgagcgcaag
    10621 gtcaaccagc aggtgcgcgc caacaatgcc gccgaagtgc acaccatggc catgcaggag
    10681 gcgctggact tcggcgcgat ggccctgttc ggcgagaagt acggtgagca cgtgcgcgtg
    10741 ctgaagatgg gtgactattc caccgagctg tgtggtggta cccacgtcaa ccgtaccggc
    10801 gatatcggcc tgttcaagat cacctccgag ggcggtgtct ccgccggcgt gcgccgcatc
    10861 gaggcggtca ccggccaggg cgccctggac tacgtggacg ccgaagaggc acgcctggct
    10921 gaagccgccg agctgctcgg tggcagcgcc ggtgacgtgg tcgagaagat ccgcgccctc
    10981 ggccagcgcc agaagcagct ggagcgcgag ctggaagccg tgaaggccaa ggtcgcggcc
    11041 ggtgccaccg ccgacctgtc cggccaggcc gtcgaggtcg ccggtgtgaa ggtgctggcc
    11101 gcccgcctgg aaggcttcga cgccaaggcc ctgcgtgacg ccatggaccg cctgaagcag
    11161 cagctgggcg acgcggtgat cgtgctggcc ggcgcccagg acggcaaggc ggccctggtt
    11221 gcgggtgtga acggcagcgc aatgggcaag gtcaaggccg gggaactgtt gtcccatatc
    11281 gccggtcaga tcgggggcaa gggcggcgga cgcccggacc tcgcccaggg tggtggcgag
    11341 gacgggcccg cccttgccac tgcgctggct gcagttgtcg aatgggtcag cccccgcctg
    11401 tgatgaaccc ggccgtcccc ctccttgtag gagcgggacg gctgacggta ccattgcgaa
    11461 tcttttccct ttgtcgtggt agcgcttctt gacggagcgt caagccggtg ggggataccc
    11521 ttccacacgg ttccatggag acttgcaaaa atgttgatcc tgactcgccg cgtcggcgaa
    11581 accctgatga tcggtgactc ggtgagcgtc accgtgcttg gcgtcaaggg taaccaggtg
    11641 cgtatcggca tcaccgcgcc gaaggacgtc gctgtgcatc gcgaagagat ctatcagcgc
    11701 atccagcgcg gtgacgaagc cggtggcgcc ggtagcgaaa attctgccga ataacgcttt
    11761 accttcgcac tcgattaacg ttatgattca cgccccgctg aggtgcaacg caccagacgc
    11821 ggtgaatacc ccggagtgat gcccgagtgg ccgaaggggc tcccctgcta agggagtata
    11881 gggtcaaaag ctctatcgag ggttcgaatc cctctcactc cgccagatac aaagaagcgc
    11941 ctgcagatcc tcgatctgca ggcgtttttc tttgtccggt gttcgaaggt gcagcctgcg
    12001 cggggctgcc tgtccttagt gatcgctacg gatggcaggt actgcagcag gcgtcgttgc
    12061 aggtgccgga gcggcggcag caggacgctg tggcggctcg agatcacgcg gtggggtttc
    12121 gcgccacaac aaggcaagcg tgcagtcgtt ggcgcgctcc ctgcacattc tttcggcctt
    12181 gcgctgcgcg gcgtccgcag tcttctcacc cagtgcaaag cccaacgcaa ccgtgcccgt
    12241 cgcgatggcc gaatagcctt cgctggtcgt gctggcagac tggccacaat tgcgcgattg
    12301 cagcgcgcag tagtgcagcg actgctgcat cgcggtggta agggaatgct ggttcatcga
    12361 gtagccgtag cggccatcct tgtcgtaggt gatcgcagat gcggcacctg cccccgaggt
    12421 gatggtcaac aacaccccaa gggaaatcgc ttgcttccag ttcatggcca tctccttttc
    12481 gacggatggt ggatcaaccc gggttcgcga cgcaacccgg cgcgtcgccg tgccgggtgc
    12541 ctgcaggtaa tccacctgca ggccggttct ccttccgccg gggctcagag cctgaccgtc
    12601 acacccacct ggaagccacg tcccggcagc ggggcgatgt acttcaacgg cgagttgtgc
    12661 gggcgcgctt cctcgttgag caggttgctg ccgttgacga acacttccat gccggcgatg
    12721 tagctgttgc gcaccggcag ttcgcggctg acctgcaggt cgaccaggtt gaacgcgtcc
    12781 agcggaattt cctcgctgac attgcggccg aggtacttct gcttgccgta gtaggtactg
    12841 gacagctgcg ccttccagtc ctggcgctgc cactgcaggt tggcgccgta gcggttggtc
    12901 ggcatgttcg gcaggtactc gccatcattg tgggcgcgca gcgcgtccgg gtggtcggcc
    12961 ttgttcttca ccaggtcggc aaaggccgag acattcaacg tgccatagcg gccgagatcc
    13021 agcgcctgtg aagcgtcgat ctcgaagccc ttcaccgtgg tgtcggtctg cttccagtac
    13081 ttcagcggca ggcggttggc ggtctgcagg cccgagtagc caaggtagag gtagttctgg
    13141 tacttcatcc ggtacgcggt ggccgacagc tcgaagccgc cgaggtggaa caggccggtc
    13201 agctccaggt tctttgcgcg ctctggctcc aggttctggt tgccttcctc ctgggtcatc
    13261 accgaatagt gcgcgttgct ggcatacagc tcgttgatct ccggtgcgcg ctgcgaggac
    13321 gagtagcgca ccttggcggc aaacaagggg ccgagctcga cgtacgagcc gaggctgtag
    13381 ctgttgagcc ggtagtcgcg gtcctgcagt ttcgtgttgg cagcattgcg cgcggtcttg
    13441 aagcggctgg gctgcagcgt gtggtcgaca cgctcatggc ggacgccggc atcgaaggtg
    13501 gcccagccga agtccagcgt ctctttcagg aacactgcat tgctgcgggt atcgacatcg
    13561 ggcaggtagc gcagcgagcc gctgccggtg acatcacgcg actggtggct gaggccgagc
    13621 atgccgctga gcgggccgac gcgctggtgg ctgagcagca gctcggcctg gatgctttcg
    13681 aagtcgtagt cgttggcctt ggacgcgccg agtcgttcgc ccgaggtgtt gtccagcttg
    13741 gagacacgca gttcggcacg ctcgaagtag ggcagcggat cgcgcagcag tgcttccagc
    13801 gcgtagcgct gctgcttgat caccacgccc accggcaggc catcggcgta gttcgagccg
    13861 aatgacaggt tctgcatcga gaagccgggc acgccgtatt cgctgtcctt ggcatcgatg
    13921 ctgacaccga cgtagccgcg gtcgaagaac agggtcgagc cggcggccac ctgcgaattg
    13981 cgtgagtagc tgttgcccaa ccggtggtga tagtcggggg tcacgtcatt gttgatctgc
    14041 ttctgcacat acgagggcgt gccgggcaca taggccgggt tgaccgggtt gatgtaggtg
    14101 cggcgctgcc agaccgaggt cgggttgttg gtatagaagg agaagtcacc gtcggcccag
    14161 tccgggttct cggtcatgaa ctggtcgata tagggctgcg aggccttgtt gtagatctgc
    14221 tggacgcgcg cttccttctg gcagctgtcg gccagcgccg agttgacgcc gccggtggcg
    14281 gggaacaggc gggtgttgca gacgctggcc ttgctgttgc cggggatgtc gtagtgggaa
    14341 atgcgctggc gcgagacctg caggttggtg gagatgttgc gctggttgtt gaagttcatg
    14401 cggaagccct gcgcgtcggc ggcgttgaag cccttgcgca ggaccagttc catcgactgg
    14461 tccttgtctt ccatgctgcg cgagatcagg cccgagtcga cctccacgct gccgccgatc
    14521 gcgttgccgc catagcgcac cgtgtcggag gacttgttga cggtgacact gcgcacgaac
    14581 agtgggtcga agggaatgtt gatgtcaccg ctgatcgcat tcatgccaag gatggactgg
    14641 ccatcctgca ggatctgaac ccggttgccg ctgagactgc ggatgaccgg ggcgcccgcg
    14701 ttcggtccga acgcactgtt ctgcacgccg gagacatgct cgagcaggcc gccgagggtg
    14761 cggttctgcg cctgtggatt gtcgacggtg acccggctgt cgatgcgcga gggcttcgag
    14821 gcctcgacct gaagcgtggg aagggtgggt tcgtccgcgg cgtgggcggt gtggacggcg
    14881 aacagaatgg cggcagcaag cagatggcga cgcatgacac gctccgtgaa aatagtgtgg
    14941 aatgttataa cgcaactatt tgtatcgaca aggggcgaat gggccttgcc agccggactg
    15001 gagatgagag tggttctcat atgagaatgg ccgacgtccg ctcctccgcc ggtgactcca
    15061 tgcatgccct cacccttgcc gacctggact atctcggccg ccacagcggc ttccgctacc
    15121 gactgccgga gccgcttgcc gttgctggcg aatcctgcgt ggtcgagggc agggtggagc
    15181 agcgctgcct gcgcccgggc ttgaccctgg cgctgtcgga tgtggttgcg caccaggcct
    15241 tcgaggcgat ctcggaagtg cccccggcgt tctcggccat cgtgatgctg gaggggcgcg
    15301 ccggcgcgag gctgtcaggt caggcgcaga ttggaatgcg cccgggcgcg ggcgcgagga
    15361 tactggccga tgcggcgccc atgaccgcga tccaccccgc cgggcagcgc atgcgcagcc
    15421 tgaatgtctc gctggacgca tcggcgccgc tggatgaccc ggtgatcaac gaactgctgt
    15481 ccgcgcaccg ctccgacggc cggccgttgc atagctggca ggtacccgcg catctggggc
    15541 acgcggccga ccagctgctg tcgggtgtct gggacggcgc gatgcatgcg ctgctgtgcg
    15601 agggcgtggg cctgcagatg ctggcactgt ccctgggcgc gcctgcacgc aatgctgcat
    15661 tggagctggg cgtgtccgcg cgcgatcgcc gcatgctgca gcgggtgatc gattgcctgc
    15721 aggcagcgcc ggccgccgat cacagcctgg acgatctggc gcgcgtggcc tgcatgagcc
    15781 ccagcagcct gcgcctgaag ttcctgcagg tgtatcgatg ctcggtgttt gcctggctgc
    15841 gcgaacatcg gttgcagcgg gcctgcgagc agctccggca gggctgcagc gtgcagcagg
    15901 ccgcacattt cgccggctac cggcatgcca ccaatttcgc gaccgcgttc cgtgcacgct
    15961 atggcatcgc accgagccgg ttccgctgac gttcgatcat cgccggcagc gcgcaaacac
    16021 ctgctgcgtc cgcgcatacg tgcgctcacg ttcaaatgac aataattctc atccagcctt
    16081 tccttcccgc tggaccttcc atgcctgcct gtttccgccc gtgtgccctg gcaaccgcca
    16141 tcggcacgac cctggcgctg ttcaacgctg cccatgccgc cgaacgcgaa cctgccgcca
    16201 cggcctcgca actgcccacc gtgcaggtca ccgccgatct cgacggcagc accgaatcgt
    16261 cgcgctccta caccaccaat tccatgggta cggcgaccgg cctgtcgctg acctcgcggc
    16321 agacaccgca gtcggtcagc gtcgtcaccc accagcagat cgaggaccgc gcgctgctga
    16381 gtacggccga tgcgctggcc accgcgccag gcatctcggt cacgcgcagc gatgccaacc
    16441 gctactcgtt ctcggcgcgg ggtttcgaga tcgacaacta ccagttcgat ggcgtggtga
    16501 tgccggtgct gtcgccgtgg aatttcggcg agaacaacct ggacatggtg gtgtatgacc
    16561 gcatcgaggt cgtgcgcggt gccaacggcc tgatgaccgg tgccggcaat ccttcggcag
    16621 cggtgaacta cgtgcgcaag cgaccgttgc gcgagttcgc tgccagtgct ggcatcggcc
    16681 tcggtagctg ggacgcacgg cgcgcgtggg cggatgtatc cagcccgttg agcagggaag
    16741 gccgcatacg cggtcgcctg gtggcagcca aagcagaggc cgacagctac accgccggcc
    16801 tggacagcac cgcgaagacg ctctacggcg tggtcagcgt ggatctgggc gaggacaccg
    16861 ggttgatcgc cggcatctcc taccagggca atgacaaccg tggctttggc agtggcttcg
    16921 cgctgttcaa cgccgatggc acgcgcaccg ctttcgatcg ctcggtatcg gccacggccc
    16981 cgtgggcacg gatgagcacc gatacccgca acggcttctt cgatttcaac caccgcttcg
    17041 gtaacgactg gcaggcgcgg gtgtcctaca gccgttcaca taccgacatg gagatgaagc
    17101 acctctatcg cggcggctat cccgatccgg tcaccggcgc catgcccaat ggcaacagct
    17161 tcacccgcta cgatggaccg gtgcggcgcg aggcagtcag tgccagcctg tcgggtccgt
    17221 tccagctgtt cggtcgccag cacacggcgt cgatcggctg gtcgcggtcg cgcgacgaga
    17281 tcgcgctggg gcagtaccgc gcgctggcgc cgctgccgcc gttggccagc tatctggact
    17341 ggcacgggcc gggcacgccg gaaccggtgt gggccagcag caagacccag gccgatgatc
    17401 tggacaacca tcagagcggc gcctatgcag tggcgcggct gtcgctggct gacccgctgc
    17461 atgtgatcgt cggtgctcgc ctgagcaact gggagacgga ccaagtctac ttcggcagca
    17521 agcgcaagta ccgctatcgc aacgagttcg tgccgtatgc cggcttggtc tgggacctca
    17581 acgggtacag cagcatctac gccagctaca ccggcatctt caagccgcag aacaatcgcg
    17641 atgcatccgg gcagatcctc gacccggtga gcggccgcag ctatgagctg ggcctcaagg
    17701 gcagctggct gcaggagcgc ttgaatgctt cagccgcgct gttccgtacc cggcaggaca
    17761 acctggccga agcgaccggc gggctggtcg agggcagtac gcaggccgcg taccgcgcag
    17821 tgaagggtgc aacggtggat ggactggaac tggaactggc cggtgagcca ttgccgggct
    17881 ggagcctggg caccagcttc accacgttca tcgcgcagga cgcacagggc agggccatca
    17941 atacggccaa gccacgcagc ctgttcaagc tgttcactac ctggcgcctg cccggtacct
    18001 gggaccggct gacccttggc ggtggcgtgg actggcagaa ccgcatgtac cagaccgcca
    18061 cggcacccgg aaaccgccgg gtgccggtag agcagcccgg ctatgcgctg gtcaacctga
    18121 tggcgcgcta ccagttcagt tccaacctgt ccgcggcggt caacatcaac aacctgttcg
    18181 accgccacta ctactcgcag atcggcttct acaaccaggg ctggtacggc gcgccgcgaa
    18241 acgtgatgtt caccgtgaag gtcggctatt aaggcgcgac gttgccctgt gttcagcgct
    18301 tcggcttgta cccggcacgg gtgacgggca cgatccgaag cgctgcgccc cacaatgtcc
    18361 tacgcagagc cttcttcact cgaacggagc atcgtatgaa gctgttgtcc gctgtgttgt
    18421 tgtccgcgct gtcactgccg gccgcgtcgg cgctggcgat ggaggcctca ccctcaccgc
    18481 tgctggggcg ctggtcgctg gatatcgcca cctcggcgct gcccgaagcg cagcgcccga
    18541 agcaggtggt gctggagttc aaggacgccg gcagcggccg ttggagctcg catgtggata
    18601 tcgtcctgca tgacggcaag accatgaagt ccgatggcac gctggccctg gatggcacgc
    18661 cgggcgcctt gtccggcacc tatggcgcgg acaaggccaa cctgaagctg ccggcgccga
    18721 acacgctggt gatgcagctg gtggaccatg gcacgcccgc ctcgacccgc atctacacgg
    18781 tagccgatga ccgcgcgacg atgaccgaga ccaaggcgtt ctacggccat gacggtacgc
    18841 cgatcctgca gaccaacctg ttcaagcggc tgccctagcg gcactgcgcg cgccgcgccc
    18901 gcggggaaga tccgcaggcg ttgcgcctgc cgccctagac cgcggccgga tctggcttgc
    18961 cggtgtcgat gccgtatcgg tcgatggcct cctgcagccg cgatcgctcg atgcggccct
    19021 cttcggccag cgccttcagg gccgccagca cgatgaagtg gcgatccact tcgaagaacg
    19081 tgcgcagcga ttcacgcgtg tcggagcggc cgaagccgtc ggtgcccaat gcagtgaaac
    19141 ggcggtcatt gatgaaggga cggatctggt cgccgacgat cttcatgtag tcggtggcca
    19201 ccaccagcgg cccttcgtgg ccttgcaggc actgctgcac gtaaggcaca cggagttccg
    19261 cggccggatg cagcaggttc cagcgttcgg cagccaggcc atcgcggcgc agttcggtca
    19321 ggctggtcgc gctccagacg tcgctggcga taccgaagtc ctgttgcagc aactcggccg
    19381 ccgcctccac ttcgcgcagg atcgaaccac tgcccatcag ctgcacgcgc agctgcgagg
    19441 tccctcgttc ggagggcgcg gggtgcagca ggtacagtcc cttcaggatg ccggcctcgg
    19501 cgccctcggg aagggctgga tgcgggtagt tctcgttgag tacggtgatg tagtagtaga
    19561 tgtcttcctg gtcgacatac atgcggcgca ggccgtcgtg gatgatcacc gccagttcgt
    19621 agttgaaggt cgggtcgtag gacacgcaac tgggaatcac cgacgacagc acgtggctgt
    19681 ggccatcgtc gtgctgcagg ccttcgccca tcagcgtggt gcggccggag gtggcgccca
    19741 gcaggaaacc gcgcgtacgc gcgtcggccg cggcccatgc caggtcgccg acgcgctgca
    19801 ggccgaacat cgaatagaag atgtagaacg gaatcgtggc caggccatgg ttgctgtagg
    19861 cagtgccggc ggcgatccac gaacagatcg caccggattc gttgatgcct tcctgcagga
    19921 tctgcccgtc cctggcttcc ttgtagtagc tcaactggcc ggcgtcctgc ggggtgtaca
    19981 gctggccgag gtacgaatgg atgccgatct ggcggaacag gccctccatg ccgaaggtgc
    20041 gtgattcatc gggcacgatc ggaatcacca gcctgcccag ttccgggtcc ttcagcaggc
    20101 tggtgaggat gcgcacgaag cccatcgtgg tggactggcc acgatcgccg ctgccctgca
    20161 gctggctgtt gaagatcgac aacggtggca gcggcagcgg atcgacccgg gccaggcgcg
    20221 ccggcagctg cccaccctgg atgcggcggc gctcggcgaa gtacagcgct tcggcgctgc
    20281 ccggttccgg gcgcaggtag ggcatctcct ccagttgttc gtcgctgacc ggcagattga
    20341 agcggtcgcg gaacgcacgc accgcgtcgg cgctcatctt cttcagctgg tggttgatgt
    20401 tctggccttc gccggcttca cccatgccga agcccttgac cgtcttggcc aagatcacgg
    20461 tgggccggcc gctggtgttc actgcctgct ggtaggcggc gtacaccttc tgcggatcat
    20521 ggccaccacg cgccagcgcc cagatgtcgt cgtcgctcat gtgcgcgacc agctccagca
    20581 gctcggggta acggccgaag aagtgctcgc gcacatacgc gccgttctgc gacttgaagg
    20641 tctggtagtc gccgtccacg cattccatca tgcgctggcg cagcaggccg ctgtggtcgc
    20701 gggccaggag gtcgtcccag ccactgcccc agatcagctt gatcacgttc cagccggccg
    20761 cgcggaaggt gccttccagt tcctggatga ccttgccgtt gccgcgcacc ggtccgtcca
    20821 ggcgctgcag gttgcagttg accacgaaca cgaggttgtc cagccgctcg cggccggcca
    20881 gcgagatcgc cgcctgtgat tcgggctggt ccatctcgcc gtcaccgagg aaggcccaca
    20941 ccttgcgacc ctggtgttcc ttcaggccgc ggtactcgag gtagcgcatg tagcgcgcct
    21001 ggtaggcggc ggtgagcggg cccagcccca tcgacacggt ggggaactgc cagaactccg
    21061 gcatcaggcg cgggtgcgga taggaagaca gtccttcgcg cccggcctcg cggcggaagt
    21121 tgtccatccg ctgcggatcg atgcggcctt ccacataggc acggccatag atgcccggcg
    21181 cggaatggcc ctggatgtag atcatgtcgc cgtcgaaggt gtcggtgcgg ccgcggaaga
    21241 aatggtcgaa gcccacgtcg tacagcacgg cggccgactg gtaggtggcg atgtggccac
    21301 cgacgttgga atgcctgccg gcacgcagca ccatcaccat cgcgttccag cggatcatcg
    21361 cgttcaagcg gcgctcgatg gccaggtcgc ccggataggc aggttggcgc tcggggggaa
    21421 tgctgttgac gtaggcggtc caggcgcggg tgtgcaggtc gccgtgctgc tgggcatcga
    21481 gctcgctgag ctggtcgatc aggtattgcg cgcgtggccg gccaccggcc tgcatcaccg
    21541 cctccagcga ttcacgccac tcccgggttt ccagcggatc ggtatcgaag gggatggggg
    21601 cttggttcat ggcggtctcc agagggcgcc gaccggccgc ctgccggggc gacaacaccg
    21661 gcagggcgca cagcactgga gcggggttgc cacggcgtgg ccgggacgcg aagggcgacc
    21721 gtggcggtca ccgggaacgc aagcgtaggc cgggcctgct ggcttcgata ggcgggcccg
    21781 gcttgggtct ctggcaagca ggcgttggca tgccgctgca ataccgctgt caccgagggc
    21841 cgtcaccctg ctgggttttc cagcctcggg gtggttggtc ggccgtgaac agcgtgagga
    21901 tctgggaaaa gagctacgaa ctgcggcgca ggctgctgcg tggcttcttc ctgcgtcgcg
    21961 gctcggccag cgaggatgcc gaggatctcg cccaggaggt gtacctgcgg ctgctgcgga
    22021 cgaccggcga ggatgcggcg gcgatcgaga acccggaagc ctacctgttc accgtggcgg
    22081 ccaatctggc gcgcgagcac gcacgctcgc gttccacgtt gccgccgctg gaagacgtcg
    22141 acctgctggc tgaagtgctg aagagtgaag aagacatcga aggtgagttc gagcgcgcgc
    22201 agcgctggaa cgatatccgc agcgccatcg tacagttgcc gacgaccacg cggcgggtga
    22261 tggagctgca ctaccgcgac gggctggact gcccggcaat cagccagcag cttcaggtgt
    22321 cggtgcacat ggtgcgcaag catatcggca aggggctgga ggcctgcagg aaggcgctgg
    22381 gcgccaggga gcgcacatga accggcatcc atccgacgtg gccgacgatg gcatttcccg
    22441 cgaggccatg gactggttcc tgtgcaatcg cgaggggacg ttgagcgagg ccgagcgcgc
    22501 tgccttcctg gaatggatga agcgttcgcc cgagcacgtg cgcgcctaca tgcgggcgct
    22561 cgcgctgtac cgtcaggtcg acgaggcact gcaatcgccg ctgcccgagg aagtgctggc
    22621 gccgccactg aaggccgcct cggcgaaggt ggtgccgctg tttggcagcg tgccggagcc
    22681 gctgcgcagt gtgcccaggc gccaccgcgc gcgctggctg ggcctggccg tcgcagcgtg
    22741 cgctgccctg ctgggcgttg gcctgcttcc gttgctgatg cctgccgagc agatgtacag
    22801 cgccgaccac ggtgaactgc tagacctggt cctggccgac cagacccagg tgcagctcaa
    22861 cgcggacagc cgcctgcgcg tgcggatggg ctggttcagc cgcaaggtgg aactcctgca
    22921 gggcgaggcc acattcgaca tcgcccacga ccggcggccg ttcaaggtgc aggtgaacgg
    22981 cctggagatc cgtgacatcg gcacggtgtt cgatgtgtcg cggcggctgc agggtacgcg
    23041 catcggcgtg gtctccggcg aggtcgaggt ctggagccag ggagcaggtg cccgccgcct
    23101 tgcgcagctg gacggagggc gcgtggtgca ggtcgacacg cgcagccatg ccgtcgaatc
    23161 gttggacatg ccattgtcga tgctgctgga ctggcagcag cgcaaggtat cgttcctgga
    23221 cgagcggttg gacgaggtgg ctgcagcctt caaccgccac aaccaggtgc aggtgcgggt
    23281 gctggacgaa ggcgccgcgt cggcgcgcct gtccggcagc ctggatgcgc atcgcatcgg
    23341 tgcgttgcag gccttcctcg aacgcgatcc gcgcttcgtc gtccgtcgcg aaggcgatac
    23401 ggtgcgggtc ggaagtcgtt gaagccggct ggtcgctcgc tgtcagaaaa aattcatcga
    23461 atccgcgttc tccacttcgg cggacgcggg ctcttacttg ggagaagccg ctgtcggatc
    23521 acgctgcggc acctgttgtc tctctcttcc aaggacccgt gatgcggaac acgctctacc
    23581 tgtcgatcgt cctcgccctg tctccctgca gcatgccggt ggccctcgcg gccggcgccg
    23641 atggcctcga agcgcctgta tcggcgccga tcgcagcgca gccgctgtcg cgtgcgctgg
    23701 aacagttgtc gcgcagttcc ggtgtgcagt tcctgtactc ggcgggcggt gatgcgcgca
    23761 tggccggcgc ggtgccacga ggggccaccg tcaggcaggc gctggacgct ctgctggccg
    23821 gcaccggcct gggctatacc gttgtcgatg gcaacgtcat cgccatcgat cctgcacccg
    23881 cgcgcaccgc gccgaagccg gccgcaccga agccgcgcga ggccgaggcc gtggtggcgc
    23941 caacgctgga tacggtgaag gtgatcgctg cgcacgaggt gatcgaccag aagaagacct
    24001 cgccggtgat caaggattcg gtggtctacg acgagatgga cagctacggt gacgagaccc
    24061 tggccgaaag cctgatggcc gcgccgggcc tgagcgcggt cgaggatgcc ggtgaaccac
    24121 gctacgtgac cgtgcgtggc gtgcaggcca acctcaacta caccaccatt gatggcatcg
    24181 cgattgccag cgtggggggc agtggctccg gcgagcgcat gaacaacctg cagctgattc
    24241 ccagcgacat cggcacccgc accgacatct acaagagctt cagcgcagaa caggcgccgg
    24301 atgcgattgg cggcgtgatc gacatcatca gccgcagcgc gtttgatcga tccggcaagt
    24361 acgtgttcgc cgatgtggcc ggtatccatt ccacggccga gacccatgtc gagcgcagcg
    24421 ccggtggcaa ccatgagacg ctgggccact tcggcaagag cgccaagatg gtgttctcca
    24481 accagttcgg tgcggaccag caattcggca tcgttgcggt ggcccgctac gagcagcgtt
    24541 cgcgcaacag cgtcaagcgc tgggtggagt cgaactacta ctacaacgat gccggcaagt
    24601 accttaccga cggcaccacc gggccggacg aggccaaggg ctggaacggg ctgcgtgcac
    24661 ccggcaactt cagtaccggt acctacacca acttcatcac caatttcggt ggctcggcca
    24721 agctggaatg gaagccgtcg gatgatccgt tctatgcatc attgctgttg tactcgtacc
    24781 ggttctacga gaactcgacg atgaacaaga ccgatctgta tggcaatgcc aagtttccga
    24841 tccgcaacca gaccgaagac agcggcacca cccagatcaa cagcatctac atcaagaatc
    24901 gccacgaccg ctgggaccgc aacaaccgtg gcgccatcgc cagcttcaac tgggatatcg
    24961 gtgatcgctc gcggctgacg ctgcgtggcg gccacaccga ggagaccttc cacaacagcc
    25021 aggtctactg gggcgtgcgc gcctacccga gcaacctgtt cgtcgactac gagaacgaca
    25081 gccatggctt tcccaacgcg gtgggcgtct ccgactccag cctgctgacc agttcggcgt
    25141 tcaagctcaa tccggcacag gcctatgtct cgccgcgcga tgccaaggag accatcgaca
    25201 acctgcgcgc cgacttcagc tacaacattg atgccgacgc gcgcggtttc ggcctggctg
    25261 cgggtgccga ataccgtcac ctgaagatct ggcaggacat cgatttcgac tactacaaga
    25321 gcagcgcgac gttgaacgac tacctgtacc cgggttcgac cctgctgggc agcgtgccgg
    25381 gcttcccgct gatcgacaac cgcaagtgga acgacgaact ttttccgaag ctgggcagca
    25441 acaacgcggc gtatcccaat gccaacttca ccagcgacta caagtacgtg gaagacatcg
    25501 gcaacgcata tgtgtctgcc cattacgcct gggaccgcct gctgctgatc ggcggcctgc
    25561 gctatgacca caccacgttc gatgcattca gtccgttcag caacgacggc ggcaccacct
    25621 atacctcggc cttccgcacg accggcggcg gctacaacaa cctgctgccg tcgttgaacg
    25681 ccacattcaa gctgagtgat gaccagcgcc tgcgcttctc cgccagccgt accctgggcc
    25741 ggccgacgcc gagcaacatc gcccaggcca cgagcaccag ctgtggcgat gacgaggaag
    25801 gcaggggctt ctgcaccatc aagcagggca acgccaacct gcagccgcgc cgttccacca
    25861 acatcgacct ggcgtgggac ctgtacttca acggcaacaa cgggcttgtg tcggtggcgc
    25921 tgttcgacaa ggtgatcaag gatgacatct acaccctgac caccttcgag aacgtgggtg
    25981 atacccgcta ccgggtgagc cagccgatga acacggatga gtcgaagctg cgtggcatcg
    26041 agttcgcggt ggccaaccgc aacctgcagc ggggccgcca ccgtttcgac atgtacttca
    26101 acgcgacccg gctggagggc cagaccaact accgcatcag cgatggcagc gagcgccgcc
    26161 tcgaccgtct gctgtaccag ccggactggt cgctcaacgg ttcggtgatc tggcgcatgc
    26221 catggaagag tgcgcagctg cgcctgtccg gtacctaccg cagccggatg ctggttgatt
    26281 tcggtgatac cgaatggctg gattcatact atgaccccta catgaccttc aacatggcct
    26341 tcagccacaa ggtcagcagg cacgtgacgc tgaagtacga agccaagaac ctgttcaata
    26401 cccagcccac ctacagcacc ggtccgaacg ggcgcttccg taccgagatc gacgactacg
    26461 gccgcttctt ctacttccac atcatctaca actgagggcg cagccgtgga gacgatcaat
    26521 cgcaggcgat tcctggcact ggccggcctg tccgcagccg gtgcgtggat gggcacggca
    26581 catgcactgg ccgcgcaggc cgatgccacc gcgctgaacc cgcgcaacct gctggcctcg
    26641 ccgcactttg ccagcacgcc gttcaccctg ggcgtggcct cgggtgatcc ctcggccgac
    26701 ggcatggtgc tgtggacgcg gctggcgacc gaaccgctgg tgttcggcgg cggcatgccg
    26761 acgcggccga tggtggtcga gtggcagctg gccgcggacg atggcatgcg caaggtggtg
    26821 cgccagggct cggcgatggc ccatcccgag ctgggccacg ccgtgcacgt ggagctggaa
    26881 gggctggcac ccggtcgccc ctactggtac cgcttcacgg tgggtggcca cgccagcgcg
    26941 gtgggctgca cccgcacctt gcccgcggtt acggccgcgg tggaccgggt gcgctttgcg
    27001 gtggcggggt gccagcacta cgaggaaggc cactacaccg catggcggcg gatcgccgag
    27061 gagccgctgg atttcgtgtt ccactacggt gactatatct acgagggtga aagccagccg
    27121 ggccagcgca ggatgaacgg ccagccgttc accaacctgc gcaatcatgt cgggccgcag
    27181 acctatacgc tggacgacta ccgccgccgc tacgcccagt acaagagcga tgccgacctg
    27241 caggccgcgc atgcgtcggc accctggttc gtcaccttcg atgaccacga agtggacaac
    27301 aactgggccg gtgccgaaga ccaggacgat acgcccagcg aagtcttcct gctgcgccgc
    27361 gcacaggcgt tccaggccta ctacgagaac atgccgctgc ggcgttcagc atttccgcgc
    27421 gagggccaca tgcagctgta ccggcgcgcg cgctacggaa cgctgatgga cctgcatctg
    27481 cttgacaccc gccagtaccg cagcaagcag gtgaacatgg cgctgcgcga ggaggtggaa
    27541 tcgccgaagc gcagcatcgt gggggcgaag caggagcgct ggctgttcga cggcctggcc
    27601 gatgccgcac cgcgctggca caccattgcc caccaggtgg cactgggcaa ttacatgcga
    27661 gagaaggacg gggtggtgca gtcgtccgac gaccagtggt cgggctatct ggacagccgc
    27721 cggcgcctgc tcgagcacat ccagaaggtc ggcttcggca acgtggtcac tgcctgtggc
    27781 gacgcgcatc gccactacgc cagtgacctt gtgcaggacc atcgcgattc gggcgtggtc
    27841 tccagcgaat tcctcgccac ctcgatcacc tccggtgccg atggccaggg cgtggatgcc
    27901 tacgccgaaa accagctgcg gcacagcccg cacctgaagg cgaccaccga caagcgtggc
    27961 tatgtgctgt gcgatgtcac ccgccacgca tggatcggtg acatgaagac gctggattcg
    28021 gtgatgcagc ccaacggcac cgtgcagagc tggaggcgct acgcggtgga gcacggccgg
    28081 ccggggttgc aggaggcctg accgggccag tccattgtag agtcgagcca tgctcgactg
    28141 ctt
//
LOCUS       DAOKIP010000033        27325 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.033,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000033 DAOKIP010000000
VERSION     DAOKIP010000033.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 27325)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 27325)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..27325
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.033"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            17..634
                     /locus_tag="QEL58_001245"
     CDS             17..634
                     /locus_tag="QEL58_001245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017355248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HDS1675740.1"
                     /translation="MSAPGAEASPNVTPLHRPGSVRLLSLDAHGRVLDWITWQDAACL
                     YAREAVAWTLGDPCLHIHGGTNRFSGLQSGMDLHPIIAARGHARSRAIDPTPNLTNPA
                     LFARDAHLCMYCGQQFNRPTLTRDHVMPLSKGGLDCWENVVTACFHCNSRKSDRTPQQ
                     AGMPLLAVPYRPSWIEHLILSNRNILADQMAFLKAQLPKRSKLST"
     gene            740..2647
                     /gene="dxs"
                     /locus_tag="QEL58_001246"
     CDS             740..2647
                     /gene="dxs"
                     /locus_tag="QEL58_001246"
                     /EC_number="2.2.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012480865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate synthase"
                     /protein_id="HDS1675741.1"
                     /translation="MIDSARYPRLARIQTPDDLRTFDESELTAVADELRAYLIESVGK
                     SGGHFAAGLGVIELTVALHYLYQTPQDQLVWDVGHQTYPHKILTGRRDEIHTVKQKDG
                     VAPFPKREESEYDTFGVGHSSTSISAALGMAIARQSEGDDRKVVAVIGDGAMTAGMAF
                     EALMHAGGMEPEPNVLVILNDNNMSISEAVGGLTKMLGRATGSRTLNALREGGKKILG
                     DKKNNPARFVKRWEEHWKGMFVPSTMFEEMGFHYTGPIDGHDMPALLSTLKTLRASKG
                     PKLLHVMTTKGKGYEPAEGDQIGYHAVGPFDPDKGLVAKTGARKPTYTDVFSDWLCDA
                     AAAEPRLFGITPAMREGSGLVRFSKEYPQRYFDVAIAEQHAVTLAAGMATQGGKPVVA
                     IYSTFLQRAYDQLVHDVAIQDLDVLFAIDRAGVVGPDGATHAGNLDLSFLRCVPNLVV
                     MAPSNEAECRQMLSTGLQHPGPAAVRYPRGTGTGVAAGTDLSTLPIGKGELSLQGSRI
                     ALLAFGSTVSAAEQVGRELGLSVVNMRFIKPLDRELVLAMAAGHEGLVTIEDNVVAGG
                     AGSGVGELLNAEGVLRPILHLGLPDSYQHHASREDLLAEAGIDAAGIRAAVLKRWPQL
                     AVGSPPLSAAG"
     gene            complement(2761..2964)
                     /locus_tag="QEL58_001247"
     CDS             complement(2761..2964)
                     /locus_tag="QEL58_001247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005417823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675742.1"
                     /translation="MLIRLQCEQRQWRVLHPDRPEPIDFRDGARAFDFAETLARLHFV
                     DTGQRAAVRVEASGAFVEAVSYG"
     gene            complement(3133..3693)
                     /locus_tag="QEL58_001248"
     CDS             complement(3133..3693)
                     /locus_tag="QEL58_001248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006380460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3011 domain-containing protein"
                     /protein_id="HDS1675743.1"
                     /translation="MGKALSWRTLACTLLPMLAAAGGAQAQSYGYGYDDDRYGGREGS
                     GIVRCESIKNRSNECRLEGRARMIRQLSGSPCVEGETWGQSRNGVWVTQGCRAEFVGE
                     YRRGGWGGGRGNGWGNNGNGWGGGEVITCHSNGHRQEYCDARIRRGVRLVRQDSRSAC
                     IEGQTWGWDRRGIWVSDGCRAQFQVN"
     gene            complement(3822..4493)
                     /locus_tag="QEL58_001249"
     CDS             complement(3822..4493)
                     /locus_tag="QEL58_001249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008267742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDS1675744.1"
                     /translation="MLTRIAIADDHPLVLLGTRIVIEAGGRHRVVAEARCAESLLAVL
                     AEEPVDLVVTDFSMPDGGRSDGQAMLQALRRNYPKVPVILATMVTNATTLNMAMRTGV
                     RGLVCKGSGVDGIRRAVDTVLSGGIYLDPELAHCLQDAGRERSLSVLSPKELEVLRLY
                     VSGPSITEIAAQLRRTVSTISRQRISAMRKLGISNDAELFAYAFEERLGNAGGMGSGA
                     EKGGP"
     gene            4744..5460
                     /locus_tag="QEL58_001250"
     CDS             4744..5460
                     /locus_tag="QEL58_001250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675745.1"
                     /translation="MVRFRRRPFEDLQEPFAAEPLAPAALPTAALPFVQQLRLHLASD
                     GAQQRRPAHAAIIHDGATVCWLDARNDRMMTTAPAPITLTLLQKLLGDADPALSLVPV
                     TQDVFVQRATVSSNIPLRLTLWNIALATAGHGTPMQPLHDGTKLRLRRWPDFRILAHR
                     PDHFRLCALLIKQGASVQACCAILDLPRRSVQSFFNAAFLTAYAFPVVGEDAPVRPSP
                     TDGLVNLWRQLRIRWSADRA"
     gene            5477..5998
                     /locus_tag="QEL58_001251"
     CDS             5477..5998
                     /locus_tag="QEL58_001251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP/GTP-binding protein"
                     /protein_id="HDS1675746.1"
                     /translation="MGPLGAGKSTLVQTLTRGKAVVTEARNTDPAVGKQYTTVAMDYG
                     DIDLPGGDRLRLYGSPGQERFSYIWPILLAGAEGAIVLIDGSAGVDSTLAAQHLRAIA
                     DSAPGMPVVIGFTRCGSTDDPVQPHWQDWLQDHAPHLPALPLDPRDMAQAITAMDLLM
                     SQIECNAMAVTHA"
     gene            5991..6362
                     /locus_tag="QEL58_001252"
     CDS             5991..6362
                     /locus_tag="QEL58_001252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008267147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="roadblock/LC7 domain-containing protein"
                     /protein_id="HDS1675747.1"
                     /translation="MHDIDRTSALDALVRDVTGIQALVVASTDGFALAQAGPQGHVAD
                     RLAAMTSSMLGLASALGRELHFGELDTLILDAADGKVLMLAIPGKQPRLLMTACDHRC
                     VIGNVLWHAKQCVRALADSLN"
     gene            6462..6788
                     /locus_tag="QEL58_001253"
     CDS             6462..6788
                     /locus_tag="QEL58_001253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014647835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675748.1"
                     /translation="MQINGAQAVALVDYESGMLLGEAGSGVDMELAAAGNTEVLRAKM
                     KTAEALNLNDNIEDVLITLGRAYHVLRPVSAKKGLFFYVVLDRQKANLALARRMVLDV
                     ESSLAL"
     gene            6983..7345
                     /locus_tag="QEL58_001254"
     CDS             6983..7345
                     /locus_tag="QEL58_001254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilin"
                     /protein_id="HDS1675749.1"
                     /translation="MVAVYAILLLAPAVDGHAGRVRLRDAANALGRAITTVEASYAAG
                     DLTLTDQHLGLPASAAYCSHLRASLPDTGHAVLSCELRETAALRGSVRWSRTASGEWR
                     CHARIPGLHPFPLQCPAE"
     gene            7551..7979
                     /locus_tag="QEL58_001255"
     CDS             7551..7979
                     /locus_tag="QEL58_001255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005314158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilin"
                     /protein_id="HDS1675750.1"
                     /translation="MRASRQKGFSLIELMVVVAIIGILAMIALPQYQKFSTKSKVAAA
                     LAELASGKIGVEALLAEGSDLKNVDAVALGMPGYSTKRCSSFDVSVNDAGEGTLTCNL
                     TDDANYGKSQTLSLERDQEGRWTCSSSIYEQTVLPEACKA"
     gene            8065..8520
                     /locus_tag="QEL58_001256"
     CDS             8065..8520
                     /locus_tag="QEL58_001256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005314158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilin"
                     /protein_id="HDS1675751.1"
                     /translation="MATTPECRSTSPGSTQRGFSLIELMVVVAIIGILAMIALPQYQK
                     FATKAKFTAALAEIAPGKAGFEVLLTEGGVSPGIHYSDIGIRLYTKRCARIDINLDPS
                     DYSRAEISCALMYGDQDSERLSLNRDSDGAWSCTSNVTDKSLLPNECKT"
     gene            8617..9204
                     /locus_tag="QEL58_001257"
     CDS             8617..9204
                     /locus_tag="QEL58_001257"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDS1675752.1"
                     /translation="MQPPGWDHPATDVLDRMDIFNKRFAERSPSAKMPALRTVNEDLL
                     ASGNSIRNGSALPDPTLVIADPNPWVRRELVRSVQPHLDGKALSEARSPAEVLMQIAH
                     PHCKVLVIDPCMPTVGQTDGMPLLRQICCLRRDLLILVLAQQPLRLLQDRALPAQVGH
                     VYAKTVNPLWLCRFINQALRDESTGVTPLAQDAAR"
     gene            complement(9173..9430)
                     /locus_tag="QEL58_001258"
     CDS             complement(9173..9430)
                     /locus_tag="QEL58_001258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014647837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675753.1"
                     /translation="MVITVKCSAAQWSLLDPAAGVAEAFSSGAAAFDAAVGRASAHHR
                     RTGQGSTVRVEALGNSVDAVHFEALPAAVAPVSGLHPAPVV"
     gene            9827..10111
                     /locus_tag="QEL58_001259"
     CDS             9827..10111
                     /locus_tag="QEL58_001259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012511684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675754.1"
                     /translation="MKALLLIPALLVLSACANQHQVAASADAAASSPATPRVGADRDA
                     HGCIGSAGYQWCEHSQRCERPWELAQAQGLANTAEAIDAYCAKPASPARK"
     gene            10124..10357
                     /locus_tag="QEL58_001260"
     CDS             10124..10357
                     /locus_tag="QEL58_001260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012511685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1653 domain-containing protein"
                     /protein_id="HDS1675755.1"
                     /translation="MAELSPLPTLAPGRYRHFKGGEYQVIDIVRSSETLEPLVLYRAL
                     YGEGGLWVRPYPMFVEQVPGEHGPQPRFARIGD"
     gene            10439..11008
                     /locus_tag="QEL58_001261"
     CDS             10439..11008
                     /locus_tag="QEL58_001261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR family transcriptional regulator"
                     /protein_id="HDS1675756.1"
                     /translation="MSASSSRSRRKAPDSVRQSLLQATIDVIARQGLAAVTVQDIAQA
                     AGVSKGALFHHFASKQALVDAAIATLIAEFEAQVRGLMAGSAHHGCFSRAYVRANFDH
                     LLQQERVNDIGLTLGNMLEPALLAQWGAWLRRMLAEFPEEAANPRLYAARCVADGYWA
                     TAYGRPLDEEERINALAMAEQALKLCDPV"
     gene            11022..11354
                     /locus_tag="QEL58_001262"
     CDS             11022..11354
                     /locus_tag="QEL58_001262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001070439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="QacE family quaternary ammonium compound efflux
                     SMR transporter"
                     /protein_id="HDS1675757.1"
                     /translation="MNPYVYLAAAIVLEVIATSLLKASDGMSRLLPTLGALVGYGLCF
                     YLLSVTMKSIPTGIAYAIWSGIGIVLISVIGLVVFKQRLDAPALIGIGLICAGVLVIN
                     LFSRSSAH"
     gene            complement(11377..11550)
                     /locus_tag="QEL58_001263"
     CDS             complement(11377..11550)
                     /locus_tag="QEL58_001263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019182774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1328 domain-containing protein"
                     /protein_id="HDS1675758.1"
                     /translation="MIKWAIIFAIIGVIAGVLGFGGIAGAAVGIAKFLFWAGIIIAVV
                     LFLLGMTVAKKVS"
     gene            complement(11645..12286)
                     /locus_tag="QEL58_001264"
     CDS             complement(11645..12286)
                     /locus_tag="QEL58_001264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysE family translocator"
                     /protein_id="HDS1675759.1"
                     /translation="MALHTWWWFLATVFVLCGTPGPNMLHILGRSVGLGFRGSVPAMA
                     GCLLAMLLVLAASAAGLSALLHSSPMLFEGLRYLGVAYLAWLGLKAWRDSGRPAPPVT
                     VDAGLAVAPALGAWAVFRGGLLVGLSNPKLLLFAAAFLPQFVDPSRGQALQYSVLVAT
                     FAGCELFWYVMYAAGGHGLRRWLAKPFARRWFERLVGSVFLAFAVALLRFRPR"
     gene            12441..13133
                     /locus_tag="QEL58_001265"
     CDS             12441..13133
                     /locus_tag="QEL58_001265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000848659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate/glutamate racemase family protein"
                     /protein_id="HDS1675760.1"
                     /translation="MKTLGLIGGMSWESSAQYYRLINEEIRDRLGGAHSAQLLLWSVD
                     FAGIKQLQHDGDWDALGDHMADAARRLQAGGADLLLICTNTMHKLTDRIEAACPLPLL
                     HIADPTANAIVQAGAHRVGLLGTAFTMEQDFYRGRLQERFGLEVLVPDAEDRRSVHDI
                     IYQELIAGVVSEQSRQVYAAVIARLVARGAEAIILGCTEIMLLVRPEDSAVPLFDTTT
                     LHARAAVDAALA"
     gene            complement(13158..13550)
                     /locus_tag="QEL58_001266"
     CDS             complement(13158..13550)
                     /locus_tag="QEL58_001266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012511691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675761.1"
                     /translation="MRGPRRPQGVALISSTVIHRSADTGAEVQVLDTTFKGKHVFIAW
                     GLRGPELTRSADPATTVAARKALHAVAGHSEGPRSPEVFIANQSAVAITVYRLLTEAR
                     SGDAIFFLCDSQAVVDWLITALEVQGAD"
     gene            13792..14301
                     /locus_tag="QEL58_001267"
     CDS             13792..14301
                     /locus_tag="QEL58_001267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3011 domain-containing protein"
                     /protein_id="HDS1675762.1"
                     /translation="MTHRLLLPITAAALVLLLAATAVAAQDYDADHIPALRCESQFNK
                     TQQCAIEVPMRLARQLSVTRCVENQNWGQRRRMLWVTDGCRAEFVADEYGRWPGPGRG
                     RGRDDEGERLVCESYEKKDKECRIRVRHEVRLVKQKSVTTCVEDRNWGWDRRGIWVSD
                     GCRAEFRVY"
     gene            14388..14837
                     /locus_tag="QEL58_001268"
     CDS             14388..14837
                     /locus_tag="QEL58_001268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDS1675763.1"
                     /translation="MTPPDPSTTTLQIRDARPGDAAALIALDSVAAHDPRRATQIGQW
                     LAQGHVHVAEQDCVAVGYLVIHHHFFGEAFVEMLMVGPARRGQGIGAALLRHAIARRG
                     GGKLFTSTNSSNSSMQRLLAASGFVDSGIVHGLDEGDAERIYRFAGD"
     gene            complement(14903..14979)
                     /locus_tag="QEL58_001269"
     tRNA            complement(14903..14979)
                     /locus_tag="QEL58_001269"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(14943..14945),aa:Pro,seq:ggg)
     gene            complement(15048..15404)
                     /locus_tag="QEL58_001270"
     CDS             complement(15048..15404)
                     /locus_tag="QEL58_001270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019182707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HDS1675764.1"
                     /translation="MLDPGSNRELPPIPAKRYFTIGEVSELCDVKPHVLRYWETEFPS
                     LEPAKRRGNRRYYQRHDVLMVRQIRSLLYEQGYTIGGARLRLDGPDAREESALSNQII
                     KQVRMELEEVLQLLRR"
     gene            complement(15385..15684)
                     /locus_tag="QEL58_001271"
     CDS             complement(15385..15684)
                     /locus_tag="QEL58_001271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002811076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor subunit alpha"
                     /protein_id="HDS1675765.1"
                     /translation="MALTKAEMAEKLFDEVGLNKREAKEFVDAFFDVLREALEQGRQV
                     KLSGFGNFDLRRKNQRPGRNPKTGEEIPISARTVVTFRPGQKLKERVEAYAGSGQ"
     gene            complement(15712..18108)
                     /locus_tag="QEL58_001272"
     CDS             complement(15712..18108)
                     /locus_tag="QEL58_001272"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011037596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit beta"
                     /protein_id="HDS1675766.1"
                     /translation="MKFSENWLRSHVPTSASRDELSAVLTAIGLEVEEVTALGEGLDH
                     VVVARIVEAVRHPEADRLQVCRVDAGQGELLQIVCGAPNARPGLVAPLAMVGAQIGEL
                     KIKPAKLRGVESNGMLCSAKELGLDNDASGLLELPDDAPVGQALVEYLGLPDASIEIK
                     LTPNRADCFSLRGIAFDVAAATRSEVLDFAADAIAAVSSRELSIQLDAGAEAPRYLGR
                     VIEGVNAAAKTPLWMAERLRRSGVRPVSLLVDITQYVMLELGQPMHAYDLGTLQGSIA
                     VRRSRAGETLKLLDGRDAALDDSFLVVTDADRAVGLAGLMGGFDTRVTDATTAVFLEA
                     AHFAPAAIMGRGRKLGLHTDAGHRFERGVDPALPRTAIEYATRLVLDLAGGTPAPVTE
                     AVREADLPQPATIVLRRARITRVLGITIDDAEVERILRALGMDVVATTDGWQVAAPSR
                     RFDIAIEEDLIEELARIHGYEQIPTTLPGGASRVAMPSETQLDALSVRRQLIARDQQE
                     TVNFAFVDDALLTQWQLRDGLVPLANPLSAELAVMRPSLLPGLVATLGRNAARQLGRV
                     RLFELGRVFAQQAGDASPGESRPVPLETARVAAAVCGDAQAVQWGLPSRKVDFHDLKG
                     DLESLAAASGAQLEFRSSARAYGHPVRSAEVLRDGVAIGWIGQIHPRLAKAMEIEADV
                     YAFELDLEPLTARRLPRAGELSRYPAVRRDLAFLVPEQVAWADLAATVRQAAGPLLRD
                     LNLFDRYVGQGVEPGFKSLAMGLILQDKSRTLTDRDVDAVVAEAVTAIEREHHARIRG
                     "
     gene            complement(18169..19164)
                     /gene="pheS"
                     /locus_tag="QEL58_001273"
     CDS             complement(18169..19164)
                     /gene="pheS"
                     /locus_tag="QEL58_001273"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019299936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit alpha"
                     /protein_id="HDS1675767.1"
                     /translation="MSDIQSLTTQALADVAAAQSPDVLEQLRVALLGKSGSITSQLKQ
                     LGALPADERKAAGEAINQARDALTRALGERKALLEDAALDARLAAEAIDITLPGRNGD
                     RAGLHPITRTLERITGIFGRLGYELSEGPEIEDDWHNFEALNFPPHHPARAMHDTFYF
                     GDGRLLRTHTSGVQVRYMGDHAPPLRMIAAGKVYRSDSDQTHSPMFHQVEGLLVDEHS
                     TFADLKGTLAEFVRAFFERDFEMRFRPSYFPFVEPGAEVDIAWQQPDGSTRWLEVLGC
                     GMVHPNVLRNVGIDPERYTGFAFGMGVERFAMLRYGVNDLRAFFENDVRFLKQFA"
     gene            complement(19358..19717)
                     /gene="rplT"
                     /locus_tag="QEL58_001274"
     CDS             complement(19358..19717)
                     /gene="rplT"
                     /locus_tag="QEL58_001274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000124858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L20"
                     /protein_id="HDS1675768.1"
                     /translation="MARVKRGVQARRRHKKILDLAKGYYNARRKVFRVAKQAVIKAQQ
                     YAYIGRKQKKRNFRSLWITRINAAARINGLSYSRFMNGLLKAGITLDRKVLADIAVHD
                     AAGFAALAEKAKGALAA"
     gene            complement(19729..19926)
                     /gene="rpmI"
                     /locus_tag="QEL58_001275"
     CDS             complement(19729..19926)
                     /gene="rpmI"
                     /locus_tag="QEL58_001275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L35"
                     /protein_id="HDS1675769.1"
                     /translation="MPKIKTNRAAAKRFRKTASGKYKCGHANRSHILTKKATKRKRNL
                     RQTGHVRAEDAGRLDRMLPYL"
     gene            complement(20193..20735)
                     /gene="infC"
                     /locus_tag="QEL58_001276"
     CDS             complement(20193..20735)
                     /gene="infC"
                     /locus_tag="QEL58_001276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-3"
                     /protein_id="HDS1675770.1"
                     /translation="MGERNISTPDNKQNRKNQEIRVPRVRVIGSDGEMIGVLSRDEAL
                     SMAEDEGLDLVEIQPQADPPVCKIMDFGKFKFEAQKKANEAKKKSKQVEIKEVKFRPV
                     TDEGDYQIKLRKMREFLEDGDKIKVNIRFRGREMSHQELGREMANRIEADLGEDIVIE
                     SRPRLEGRQMVMMIAPKKKT"
     gene            complement(20784..22685)
                     /gene="thrS"
                     /locus_tag="QEL58_001277"
     CDS             complement(20784..22685)
                     /gene="thrS"
                     /locus_tag="QEL58_001277"
                     /EC_number="6.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010486466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine--tRNA ligase"
                     /protein_id="HDS1675771.1"
                     /translation="MINITLPDGSRREFENPVSVMDVAQSIGAGLAKATIAGSVDGVL
                     VDASDVIDHDASLRIITAKDEEGVEIIRHSCAHLIGHAVKQLYPDVKMVIGPVIAEGF
                     YYDIYSERPFTPEDMAAIEKRMGELIAQDYDVIKKMTPRAEVVEIFKARGEDYKLRLI
                     EDMSDDIQAMGMYYHQEYVDMCRGPHVPNTRFLKAFKLTRISGAYWRGDAQNEQLQRI
                     YGTAWADKKQLEAYIKRIEEAEMRDHRRIGKQQDLFHLQEEAPGLVFWHPKGWALWQV
                     VEQYMRKVYRKTGYGEVRCPQILDVSLWQKSGHWDNYQDAMFFTESEKRTYALKPMNC
                     PGHVQVFNQGLHSYRDLPIRYGEFGACHRNEPSGALHGILRVRGFTQDDGHVFCTENQ
                     VEAEVTAFHQQALAVYQHFGFDEIQVKIALRPESRLGDDATWDKAEGALRSALSSNGV
                     EWQELPGEGAFYGPKIEYHLKDAIGRTWQLGTMQVDFMMPGRLGAEYVDENSQKKHPV
                     MLHRAIVGSMERFLGILIEHHAGQFPAWLAPTQVVVANITDAQAEYVSGVTKTLAEQG
                     FRVSSDLRNEKIGYKIREHTLQRVPYLLVIGDREKENGAVAVRTRSGEDLGSMSLQAF
                     IERLHAEGA"
     gene            23048..25174
                     /locus_tag="QEL58_001278"
     CDS             23048..25174
                     /locus_tag="QEL58_001278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008268643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent siderophore receptor"
                     /protein_id="HDS1675772.1"
                     /translation="MYTLSLPARAGLLRAPLSALALAVSGMLPGLAAADEARTLDTVQ
                     VTAPIATESGSATKTDTPLREIPQSISVITDRQMRDRGIHGVEEAVWYTAGAQGGQYG
                     EDTRSDWLLVRGFKPARYLDGLATVEGTWTGESRLEPYGLERIDVLKGPASVNYGAMP
                     PGGLINFVSKRPHANPLQEVELQVGNYGLKQAAFDIGGALNDSGSVLYRLVGLARNSD
                     NVIDHVHDDRYYLAPSLTWTPDDANALTVLARYQKNDTVETGGFLPYQGTVVPGANGR
                     YISRHFFSGEPGVNDYTKESAALGYEFRHDFGDGTVFNQNVRYSWAEVDASRGSLGLF
                     GLVSPDSTELVRYYYPRLDKSESVAIDNNLTFHFRSGRAEHTVLAGLDYRRARNDYAS
                     AFLFGAPGIDAYNPVYGAPVQVPDYTSRQVQTQSTLGLYLQDQIRIDRWLVTLAGRQD
                     WVGTDTEQRIGTASRAHQSDDRFSGRVGVNYLFDNGVSPYVSWSQSFQTTIGTDYAGR
                     AFVPTTGEQFEAGVKYQPEGGRLLLTAAAYQIEQDNTLTVDPQHTLFSIQQGQTRVRG
                     AELEGRWNIGQGLSVYGSYTRLDAKVRRSTDAASVGKRVALVPKESASLGADYTFTAG
                     ALSGFGFGAGVRYNGGIYGDIYNDWYTPSFTLIDASVHYDRGPWRLQVNAANAADKKY
                     VSACNSATWCYYGYPRTVTASLRYQW"
     gene            25182..25478
                     /locus_tag="QEL58_001279"
     CDS             25182..25478
                     /locus_tag="QEL58_001279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014647850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675773.1"
                     /translation="MITVGLSTLGFCSLGMLAAMFSALAFYAASPHCRWPRLRRAGRL
                     GHQIGLVAAAASLWLWMAELGFAAGLVAMLCTWMLSAMLLPALAAWHRPGAETP"
     gene            25478..25741
                     /locus_tag="QEL58_001280"
     CDS             25478..25741
                     /locus_tag="QEL58_001280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012511696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675774.1"
                     /translation="MWARAFAGIFAGFFLAAAATGLVTWLPPGPWQNALVPALIAFVP
                     LWMLAALWAFSFRRAGYAWLALAGSAAAGFGVLGLLRMAGAVQ"
     gene            25752..27311
                     /locus_tag="QEL58_001281"
     CDS             25752..27311
                     /locus_tag="QEL58_001281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019336890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY domain-containing protein"
                     /protein_id="HDS1675775.1"
                     /translation="MKFSSQTLRTFTTLHTWVGLVAGFGLFVAFYAGALTLFHHDLPL
                     WQTPGAATALPASLDDAQYLLEDVLAAHAEARRHVGMTFPGAEHPQPLAYWQADDGGW
                     RYAWPGQTAGSPTPPQSGLAELVNELHYSLGLPVAGIYVMGIVSLLYGMALLSGLVIH
                     LPKLLGDLFALRPGRNLKQLWQDAHNVIGVLSLPFHLMFAVTGALLCLVFIQIALLNP
                     LIFEGKALQAVPTAMDTAPVRAASGVPAAPGSLRELHARALEVARAQGVTDFEPAYLK
                     LANGGDANATIEITGESSGTLGPLGSVALDVASGRLLASQLPGHRDANHATLSAAYAL
                     HFGEFGNGVVVWLYFLLGLGGAFLFYSGNLLWIESRRKRRQPQQPRSGVNMARATVGV
                     CIGLCVAISVAFASALVLERVAPSAVDHGIRWACFGSWAACALWAALRRPAQAARELL
                     WAAAISTALVPVLHGALSGDWLWRAAAHGHWPLFWVDAIALAMAFGFARLALASQRRA
                     RNGDPNSVWAN"
BASE COUNT         4615 a         9325 c         8750 g         4635 t
ORIGIN      
        1 cgaagccgga gctccgattt ctgctccggg cgccgaggca tcgcccaacg tcaccccgct
       61 gcatcgcccc ggttcggtcc ggctgctctc gctggatgcc cacggacgcg tactggactg
      121 gatcacctgg caggatgcgg cctgcctcta cgcccgtgaa gccgtggcct ggacgctggg
      181 cgatccctgc ctgcacatcc acggcggcac caaccgcttc agcggcctgc aaagcggcat
      241 ggacctgcac ccgatcatcg ccgcccgcgg ccacgcccgc tcccgcgcga tcgaccccac
      301 gccgaacctg accaacccgg ccctgttcgc ccgcgatgcg cacctgtgca tgtactgcgg
      361 ccagcagttc aaccgcccta ccctcacccg cgaccacgtc atgccgctgt ccaagggtgg
      421 cctggactgc tgggaaaacg tggtcaccgc ctgcttccac tgcaactcgc gcaagagcga
      481 ccgcaccccg cagcaggcgg gaatgcccct gctggccgtg ccctaccggc ccagctggat
      541 cgagcacctg atcctgtcca accgcaacat cctggccgac cagatggcct tcctgaaggc
      601 gcaattgccg aagcgatcga aactgagcac ctgaacggcc gaaaatgcaa ccctcaccgt
      661 cctgtcacgg gcggcggcgt ttgcttgccc cacccccgtt tgagggcgaa aatgggcgtt
      721 cagaaaaagt gcgaacacga tgatcgactc tgcccgctat ccccgcctcg cgcgcatcca
      781 gacaccggat gacctgcgca cgttcgacga atccgaattg acggcggtcg ccgacgagct
      841 gcgcgcctac ctgatcgaat cggtcggcaa gagcggcggc catttcgctg ccggcctggg
      901 cgtgatcgaa ctcaccgtgg ccctgcacta cctgtaccag acgccgcagg accagctggt
      961 ctgggacgtc ggtcaccaga cctacccgca caagatcctc accgggcgcc gcgacgagat
     1021 ccacaccgtc aagcagaagg acggcgtcgc gccgttcccg aagcgcgaag agagcgaata
     1081 cgacaccttc ggcgtcggcc actcctcgac ctcgatctcg gccgcgctcg gcatggccat
     1141 cgcccgccag tccgaaggcg acgaccgcaa ggtcgtggcg gtgatcggtg acggcgcgat
     1201 gaccgccggc atggccttcg aggcgctgat gcacgctggc ggcatggaac cggagccgaa
     1261 cgtgctggtg atcctcaacg acaacaacat gtcgatctcc gaggcggtcg gcggcctgac
     1321 caagatgctc ggccgcgcca ccggcagccg cacgctcaac gcactgcgcg aaggcggcaa
     1381 gaagatcctc ggcgacaaga agaacaaccc ggcccgcttc gtgaagcgct gggaagagca
     1441 ctggaaaggc atgttcgtgc cgtccacgat gttcgaggaa atgggcttcc actacaccgg
     1501 cccgatcgat ggccatgaca tgccggcgct gctgtccacg ctgaagacgc tgcgcgcctc
     1561 caagggcccg aagctgctgc acgtgatgac caccaagggc aagggttacg agccggccga
     1621 gggcgaccag atcggttacc acgcggtcgg cccgttcgat ccggacaagg gcctggtggc
     1681 caagaccggt gccaggaagc cgacctacac cgatgtgttc agcgactggc tgtgcgacgc
     1741 cgccgccgcc gagccgcgcc tgttcggcat caccccggcg atgcgcgaag gctcgggcct
     1801 ggtgcgcttc agcaaggaat acccgcagcg ctatttcgac gtggccatcg ccgagcagca
     1861 cgcggtcacc ctcgccgccg gcatggccac ccagggcggc aagccggtgg tggcgatcta
     1921 ttcgaccttc ctgcagcgcg cgtacgacca gctggtgcat gacgtggcaa tccaggacct
     1981 ggacgtgctg ttcgcgatcg accgcgccgg cgtggtcggc ccggatggcg cgacccatgc
     2041 cggcaacctc gacctgagct tcctgcgctg cgtgccgaac ctggtggtga tggcgccgtc
     2101 caacgaagcc gaatgccggc agatgctcag caccggcctg cagcatccgg gcccggccgc
     2161 ggtgcgctat ccgcgcggca ccggcaccgg cgttgccgcc ggcaccgacc tgtccacgct
     2221 gccgatcggc aagggcgagc tgagcctgca gggcagccgt atcgccctgc tcgccttcgg
     2281 cagcaccgtg tccgccgcag aacaggttgg ccgcgagctg ggcctgagcg tggtcaacat
     2341 gcgcttcatc aagccgctgg accgcgaact ggtgctggcc atggccgccg ggcacgaagg
     2401 cctggtcacg atcgaggaca acgtggtggc cggcggcgcc ggttccggcg ttggcgagct
     2461 gctcaatgcc gaaggcgtgc tgcgcccgat cctgcatctg ggcctgcccg acagctacca
     2521 gcaccacgcc agccgtgagg acctgctggc cgaagccggc atcgacgcgg cgggcattcg
     2581 cgccgcggtg ctgaagcgct ggccgcagct ggccgtgggc agcccgccgc tcagcgcggc
     2641 aggctgaggc cgctgctggc ccggtggatc cacgcatggc gtggatctac aggggaacgg
     2701 agaccgatcc acgccctgcg tggatgacgc gccggcaaat tgatccggcg cgccgcgcgc
     2761 tcagccgtag ctgaccgctt ccacaaaggc gccactggcc tccacgcgca cggcagcgcg
     2821 ctgcccggtg tcgacgaagt gcaggcgtgc gagggtttca gcaaaatcga aggcgcgggc
     2881 accgtcgcgg aaatcgatcg gctccggccg atccgggtgc agcacgcgcc actggcgctg
     2941 ctcgcattgc aggcggatca acatgcggct cactccttga gacagcgtat cgacgggggc
     3001 gggacaggca tgccgattgc ggcgcgcatt gtcgcgacga atcaggagca cgcggaggtg
     3061 cccctgatcg cagacgatac gacgttcaaa atgtgagctg tatcagatta ttctgatttt
     3121 cgagaggaac gctcaattca cctggaactg ggcacggcaa ccgtcgctga cccagatgcc
     3181 gcgacgatcc caaccccagg tctggccttc aatgcacgcg ctgcgcgaat cctggcggac
     3241 caggcgcacg ccacggcgga tgcgcgcatc gcagtattcc tggcggtgcc cattggaatg
     3301 gcaggtgatc acctcaccgc cgccccaacc attgccattg ttgccccagc cgttgcctcg
     3361 gccgccaccc cagccgcccc gccggtactc gccgacgaat tcggcacggc agccctgggt
     3421 gacccataca ccgttgcgcg attggcccca ggtctcgcct tccacacagg gcgatccaga
     3481 cagctggcgg atcatccgcg cccgcccctc caggcggcac tcgttgctgc ggttcttgat
     3541 cgattcgcag cgcacgatgc cgctgccctc gcggccgcca tagcggtcat cgtcatagcc
     3601 gtagccatag ctctgcgcct gggcgccgcc cgcggccgcc agcattggca gcagggtgca
     3661 ggccagggtg cgccagctga gtgccttgcc catcgagatc tccagatgaa tacgatggcg
     3721 caagcatccg ggattcgcgg cgcgccgcac agtgggaaac gtaacggcag tttttccccc
     3781 attcaaacaa cccaaccgga cctgactgga ccggcgtgac ctcatggacc gcctttctcg
     3841 gccccgctgc ccatgccacc ggcattgccc agccgttcct cgaacgcata ggcgaacagc
     3901 tcggcgtcat tgctgatgcc cagtttcctc atcgcggaaa tgcgttgccg gctgatggta
     3961 ctgaccgtgc gccgcaactg cgcggcgatc tcggtgatcg aaggccccga cacgtacagc
     4021 cgcaggactt ccagttcctt cggtgacagc accgacagcg atcgctcgcg tccggcatcc
     4081 tgcagacagt gcgccaattc ggggtccagg tagatccctc cgctcaacac cgtgtcgacc
     4141 gccctgcgga tgccatccac gccactgccc ttgcacacca gcccacgcac tccggtgcgc
     4201 atggccatgt tcaaggtggt ggcattggtg accatcgtgg ccaggatcac cggcaccttg
     4261 gggtaattgc gacgcaacgc ctgcagcatc gcctggccgt ccgagcggcc accatcgggc
     4321 atcgaaaaat cagtcaccac cagatccacc ggttcttcgg ccagcaccgc cagcaggctt
     4381 tccgcacatc gcgcctcggc caccacacga tggcggccac cggcctcgat cacgatgcgc
     4441 gtgccaagca ggaccagtgg atgatcatcc gcaatggcaa ttcgagtgag catgctgatt
     4501 acccgtcaat agtcacgccg cagtgcgcag cgaagacgct agtaatcatt ccaggccacg
     4561 tcaacttaac aatcacgcac tgcaattgat gtcatcgcag cagcatcaac cggccaattc
     4621 cattagttgc agcgaactgc ataaacacga atgacgctgc aattttccca atagtttcat
     4681 tccagaaaac cgggagcgcc gcttacatag tcacctccga tcactcgctg cactggacac
     4741 cccatggtcc gtttccgtcg tcgacctttt gaggatctgc aagagccctt tgcagcagaa
     4801 ccgctggcgc cggcagccct gccaacggcc gcattgccgt tcgtacagca gttgcgcctg
     4861 caccttgcaa gcgacggcgc gcagcaacga cgcccggccc atgccgcgat catccatgac
     4921 ggcgccaccg tgtgctggct ggatgccagg aacgatcgga tgatgaccac tgcacccgcg
     4981 ccgatcacgc tgacgctgct gcagaagctg ctgggcgatg cggaccctgc gctcagcctg
     5041 gtgccggtga cgcaggatgt gttcgtgcag cgtgcgacgg tgtccagcaa cattccactg
     5101 cgcctgacgc tgtggaacat tgccctggcc accgccgggc atggcacgcc aatgcagccc
     5161 ctgcatgacg gcaccaagct gcgccttcgg cgctggccag acttccgcat cctggcccat
     5221 cgtcccgatc acttccggct gtgtgcgctg ctgatcaagc agggcgcatc cgtgcaggcg
     5281 tgctgcgcca tcctcgacct gccacgccga agcgtgcagt cattcttcaa tgcggccttc
     5341 ctcaccgcct acgcctttcc cgtcgtgggc gaggacgcgc ccgtgcgccc ctcgcccacc
     5401 gacggcctcg tcaatctgtg gcgacaactt cgcatccgct ggagtgcaga ccgtgcgtga
     5461 gcacaagatc gtagtgatgg gccccctcgg cgcaggcaag tccaccctgg tgcagaccct
     5521 gacccggggc aaggccgtgg tgaccgaggc ccgcaatacc gaccccgccg tgggcaagca
     5581 gtacaccacc gtggccatgg actatggcga catcgacctg cccggcggtg accgcctgcg
     5641 cctgtatgga tcgcccgggc aggagcgctt ttcatacatc tggccgatcc tgctggccgg
     5701 tgccgaaggt gccatcgtcc tgatcgatgg cagcgccggc gtggacagca cgctggctgc
     5761 gcagcacctg agagccatcg cagacagcgc gccgggcatg ccggtggtca tcggcttcac
     5821 ccgatgcggc agcaccgatg atccggtaca gccgcactgg caggactggt tgcaggacca
     5881 tgcaccgcat ctgccggcgc tgccactgga cccacgcgac atggcacagg ccatcaccgc
     5941 gatggatctg ctgatgagcc agatcgaatg caacgccatg gcggtcaccc atgcatgaca
     6001 tcgaccgcac ttcggcattg gacgcgctgg tacgcgacgt caccggcatc caggccctcg
     6061 tcgttgccag caccgatggt ttcgcactgg cccaggccgg cccgcagggc catgtcgccg
     6121 atcgcctggc cgcgatgacc agctcgatgc tcggcctggc cagtgcactg ggccgcgaac
     6181 tgcacttcgg tgagctcgac acgctgatcc tcgatgccgc cgacggcaag gtactgatgc
     6241 tcgccattcc cggaaagcaa ccgcgcctgc tgatgaccgc gtgcgaccac cgctgtgtca
     6301 tcggcaacgt gctctggcat gccaagcagt gcgtgcgcgc cctggccgac agcctgaact
     6361 gatgcatgcc tttctcactg ctcagacggc tgttcaccct ctctcacccg caacggacca
     6421 ctgaaatgaa tatcgccatc aacaaatgcc tggacacgct catgcagatc aacggcgcgc
     6481 aagccgttgc cctggtcgac tacgaaagcg gcatgctgct gggtgaagcc ggctcgggcg
     6541 tggacatgga actggcggcc gcaggaaaca ccgaagtgct gcgcgccaaa atgaagaccg
     6601 ccgaagcact gaacctcaac gacaacatcg aagacgtgct gatcacgctg ggacgtgcgt
     6661 accacgtgct gcgcccggtg tcggccaaga aggggctgtt cttctacgtg gtactggacc
     6721 ggcagaaggc caatctcgcc ctcgcacggc gcatggtgct ggacgtggaa agttcgctgg
     6781 cgctgtaaca cccggcaacg acagacaggg gatggaagcg ccggggctgc tctggggaga
     6841 gcggccccgg cctgcgagtg cgccccgcac tcaccactca ccatcgggag ttccttgcat
     6901 gccagctgga tcgtcagcgc acgcagcacg cgacgtgcca ccgcgctacc cgcactgggc
     6961 ggcggcgggc attaccatcg cgctggtcgc cgtctacgcg attctgttgc ttgcccccgc
     7021 cgtggacggc catgccggcc gcgtgcgcct gcgtgatgcg gccaacgcgc tgggccgtgc
     7081 catcaccacc gtcgaagcga gttacgccgc aggcgatctc accttgaccg accagcacct
     7141 gggcttgcct gccagtgccg cgtactgcag ccatctgcgt gcctcgctgc cggatacagg
     7201 acatgccgtg ctgtcctgcg agctgcgcga aacggccgcc ctgcgcggca gcgtcaggtg
     7261 gtcgcgtacc gcttccggcg agtggcggtg ccatgcgcgc attccgggtc tgcatccatt
     7321 tccgctgcaa tgccctgcgg aatgaaagcg cggcgtctga ttatttgcaa aacgctatcc
     7381 cagacgcttg atccattcca ttttacgaat tgtggaatat ccccatcgcg gcatgcgtga
     7441 ttttctagga ctgcgccacg aagcatcttt tcgtggccat gagcaatgaa tcacccacgt
     7501 cacagaggat tatcatgaat accgcactcg tcccagtacc gcgcacaggc atgcgcgctt
     7561 cccggcagaa gggtttctct cttattgaac tcatggttgt ggtggcgatc atcggcatcc
     7621 tggcgatgat cgcgctgccg cagtaccaga aattctcgac caagtcgaaa gtcgctgcgg
     7681 cactggccga gctggcaagc ggcaagattg gcgttgaagc gctgctggct gagggttcag
     7741 acctcaagaa tgtggacgca gtagcactgg gaatgccggg gtattccacc aagaggtgct
     7801 cgagcttcga tgtcagcgtg aatgacgctg gcgagggcac cctcacctgc aatctgacgg
     7861 acgacgccaa ttacggcaag agccagaccc tgagcctgga acgagaccag gagggtcgct
     7921 ggacgtgctc aagttcgatc tatgagcaga ccgttctgcc ggaagcctgc aaggcctaga
     7981 ccttttgacg caggagcagg ggcagcgcat aagcgaattg cggcccctgc ttcttcgcac
     8041 gcccgcgaat gacaggaatc catcatggcg accacccccg aatgccgcag cacatcgccc
     8101 ggctcaactc aacgcggatt ttcactcatc gaactgatgg ttgtagtagc catcattggc
     8161 atccttgcca tgatcgcatt gccgcagtac cagaagttcg cgaccaaggc caaattcact
     8221 gctgccttgg cagaaattgc gccgggcaag gcaggcttcg aagtccttct cacagagggg
     8281 ggcgtctcgc caggcatcca ttactcagat attggcatcc gcctttacac caaacgctgc
     8341 gccagaatag atatcaacct ggacccgtcc gattactccc gtgcagagat cagttgcgcg
     8401 ctgatgtatg gcgaccagga ctcggaaagg ctgtcactca atcgtgatag cgatggagcg
     8461 tggagctgca ccagcaacgt caccgacaag agcctgctgc ccaacgaatg caaaacctga
     8521 tcatggcgcc gcgccatcca ggtttggcgc ggcttccacc gctggaagtc gacacgcatg
     8581 tgatcaagac ccgccacaga caggcccaac acacccttgc agccaccggg ctgggatcat
     8641 ccagccacgg acgtcctcga ccgtatggat atattcaaca agcggttcgc agagcgctct
     8701 ccaagcgcca agatgcccgc gcttcgaaca gtcaatgaag atctgctcgc ttcaggcaac
     8761 agcatccgta atggatctgc gttgccagac cccaccctcg tcatcgccga tcccaacccc
     8821 tgggtccgtc gtgaactggt gcgcagcgtc cagccccatc tggatggcaa ggcgctgagc
     8881 gaagcccgct cgcccgccga ggttctgatg cagatcgccc acccgcattg caaggtgctg
     8941 gtcatcgatc cgtgcatgcc caccgtaggc cagaccgatg gcatgccgct gctgcgccag
     9001 atctgctgcc tgcgcaggga cctgctcatc ctggtcctgg cccagcaacc cctgcgcctg
     9061 ctgcaggatc gcgccctgcc agcccaggtc gggcatgtct atgcgaagac ggtcaaccca
     9121 ctgtggctgt gccgtttcat caaccaggca ctgcgcgatg aatcgactgg cgttacacca
     9181 ctggcgcagg atgcagcccg ctgaccggcg cgacggcggc gggcagcgcc tcgaaatgca
     9241 cggcgtccac gctgttgccc agcgcttcca cgcgcaccgt gctgccctgg ccagtgcgtc
     9301 ggtggtgggc gctggcccgg ccaaccgcgg catcgaaggc ggcggcgccg ctgctgaagg
     9361 cttcggccac gccggcggcg gggtccagca gcgaccactg tgcggcactg cacttgacgg
     9421 taatgaccat gggaggctcc ttgtggggaa acggcgcagg ggcgcatgac cctctgctga
     9481 tgacgtcacc gtagccagcc catcagcgcg gtcctatcag ataagtacga aaaagccgcg
     9541 cccgggtgtc agaactccac gctcatcaca tccctgagcc tgtttagcct gttcattccg
     9601 tgatccttgt cacggagtcg gttcagcttc acactaccgt cactaacagg ggccccttcc
     9661 acatgcgcac cttcttctcg cagcagcgcg ggacgctgct caagttctat ttcggggcca
     9721 gctatctggt gctgatcgaa gaactgatcc gcgccgccat gcattgagcg cttgctggca
     9781 gcacggcgcc agcagaaact gttgctccaa ggtatggagt ttgccgatga aagcgcttct
     9841 tctgattcca gcgctgctgg tactgtccgc gtgcgccaac cagcatcagg tggccgccag
     9901 cgccgatgct gcggccagct cgccggccac gccgagggtc ggcgctgatc gcgacgccca
     9961 cggctgcatc ggctcggctg gctaccagtg gtgcgaacac agccaacgct gcgagcggcc
    10021 gtgggaactg gcacaggccc aggggttggc caataccgcc gaagcgatcg atgcctactg
    10081 cgcgaagccg gccagtccgg cgcgcaagtg agccgcgcgc accatggctg agctcagtcc
    10141 gctgcccact ctcgcacccg gccgctaccg ccatttcaag ggcggcgagt accaagtgat
    10201 cgacatcgtc cgcagcagcg aaacgctgga accgctggtg ctgtatcgcg cgctctatgg
    10261 cgaaggtggg ctgtgggtgc gcccctaccc gatgttcgtc gagcaggtac ccggcgaaca
    10321 cggcccgcag ccgcgcttcg cgcgtatcgg cgattgaatc cgcattgccg gccacggccg
    10381 gcagtggctg cgccgggcct gcgctacaat cgtaccgtcc agtcggtttc ttcccgccat
    10441 gtccgcatct tcctcccgtt cgcgccgcaa ggcgcccgac agcgtgcgcc agtcgctgct
    10501 gcaggccacc atcgacgtga tcgcacggca gggactggcc gcagtgaccg tgcaggacat
    10561 cgcacaggcg gctggcgtca gcaagggcgc actgttccat cacttcgcca gcaagcaggc
    10621 gctggtcgat gccgccatcg ccacgctcat cgctgagttc gaagcgcagg tacgtggcct
    10681 gatggcaggc agtgcgcacc acggctgctt cagccgcgcc tatgtgcgcg ccaacttcga
    10741 ccacctgctg cagcaggaac gggtgaacga catcgggctg accctgggca acatgcttga
    10801 acctgcactg cttgcgcagt ggggcgcctg gctgcggcgc atgctggccg agttcccgga
    10861 ggaagccgcc aatccccgcc tgtatgcggc gcgctgtgtt gccgacggct actgggccac
    10921 cgcctacggc cggccgctgg acgaggaaga acgcatcaat gccctggcca tggccgagca
    10981 ggccctgaag ctgtgtgacc ctgtgtaagc cggagcctgc gatgaatccc tacgtctatc
    11041 tcgccgccgc gatcgtgctg gaagtgatcg ccacgtcgct gctcaaggcc tccgacggca
    11101 tgagccgact gctgcccacg ctcggtgcgc tggtcggcta cgggctgtgc ttctacctgc
    11161 tgtcggtgac catgaaatcg ataccgaccg gcatcgctta tgccatctgg tccggcatcg
    11221 gcatcgtgct gatctcggtg atcgggctgg tggtgttcaa gcagcgcctg gatgcgccgg
    11281 cactgatcgg catcgggctg atctgcgccg gcgtgctggt gatcaacctg ttctcgcgca
    11341 gcagcgcaca ctgagcacgc tgccgcgcgg cacgcgctag ctgaccttct tggccacggt
    11401 catgcccagc aggaacagca ccacggcgat gatgatgccg gcccagaaca ggaacttggc
    11461 gatgccgacc gccgcgccgg caatgccgcc gaagccgagc acgcctgcga tgacgccgat
    11521 gatggcgaag atgatggccc acttgatcat gtcaaacctt tccccgcggg gactgcgtac
    11581 tggatgatca ggctaggccg tggccgatgc ggcactcgtg aacaggccgc gtgcgcggcg
    11641 tgaatcagcg cgggcggaaa cgcagcaggg ccaccgcgaa cgccaggaac acgctgccca
    11701 ccagccgctc gaaccagcgc cgtgcaaacg gctttgccag ccagcggcgc aggccatggc
    11761 cgccggctgc atacatcacg taccagaaca gctcgcagcc ggcgaaggta gccaccagca
    11821 cgctgtactg cagcgcctgg ccgcgcgagg ggtcgacgaa ctgcggcagg aacgccgccg
    11881 cgaacagcaa cagcttggga ttgctcaggc cgaccagaag tcccccgcgg aacactgccc
    11941 atgcgccaag tgccggcgcg accgccagcc ctgcatccac ggtcaccggc ggcgccgggc
    12001 ggccgctgtc acgccatgcc ttcagcccca gccaggccag gtaggccacg cccaggtaac
    12061 gcagcccttc gaacagcatc ggcgaggaat gcagcagcgc gctcaagccc gccgcggacg
    12121 cggccagcac cagcagcatc gccagcaggc agcccgccat tgccggcacg ctgccacgga
    12181 aacccagccc gacgctgcgg cccaggatat gcagcatgtt cggccccggg gtgccacaca
    12241 gcacgaacac ggtggccagg aaccaccacc aggtatgcag ggccatcgcg cacatccact
    12301 ccagaagacc gcaccagcat agggcgtgcg cgcaacgcac ggaacataca gcccaccgtg
    12361 gatgcagtgg ttacagattc cgggatcggc agccgcgcgc cttctgtgct gcaatggagg
    12421 cccctggcat ggagcggtgc atgaagaccc ttggcctgat cggcggcatg agctgggaga
    12481 gctcggcgca gtactaccgg ctcatcaacg aggagatccg tgatcgcctg ggcggcgccc
    12541 actcggcaca gctgctgctg tggtcggtgg atttcgccgg catcaagcag ctgcagcacg
    12601 acggcgactg ggatgcgctg ggcgaccaca tggccgatgc agcacggcgc ctgcaggccg
    12661 gcggcgccga tctgctgctg atctgcacca ataccatgca caagctgacc gatcgcatcg
    12721 aagccgcctg ccccctgccg ctgttgcata tcgccgaccc gaccgcgaac gcgatcgtgc
    12781 aggcgggtgc gcacagggtg ggcctgcttg gcaccgcctt caccatggag caggactttt
    12841 accgcggccg gctgcaggag cgcttcggcc tggaggtgct ggtgcccgat gccgaagatc
    12901 gtcgcagcgt gcacgacatc atctaccagg agctgatcgc cggcgtggtc agcgagcagt
    12961 cacggcaggt ctatgccgcg gtcatcgcgc gcctggtcgc gcgcggcgca gaggcgatca
    13021 tcctcggctg taccgagatc atgctgctgg tgcggccgga ggacagcgcg gtgccgttgt
    13081 tcgataccac caccctgcat gcgcgggccg cggtggacgc ggcactggcc tgaccccacg
    13141 tgcgatgcgg cgcggaatca gtccgcgccc tgcacttcca gcgctgtgat cagccagtcg
    13201 accaccgcct gcgaatcgca caggaagaag atggcatcgc cggagcgcgc ttcggtgagc
    13261 aggcgataca ccgtgatcgc caccgccgac tggttggcga tgaacacttc cgggctgcgc
    13321 ggcccttcgc tgtgccccgc cacggcatgc aacgccttgc gcgcggccac ggtcgtggcc
    13381 gggtccgcgc tgcgggtcag ttccggcccg cgcaggcccc acgcaatgaa cacatgcttg
    13441 cccttgaacg tggtgtccag gacctgcacc tcggcgcctg tgtcggccga gcgatgaatg
    13501 acagtactgc tgatcaacgc aaccccctgt ggtcgtcgtg gtccgcgcat cctcccccac
    13561 aggccgcccg cacaccagcg acggcagccg caggctgcgc cgacaggcgt ggaagacatg
    13621 taagaaggtg taaaccgatg cgatcggatg tgcagagatg atacgggatg taagcctctg
    13681 catgggcccg cgcgtactag taaaccccca ctgagccggt tccggaacgg tgcgttccgg
    13741 cggtcccggg ctgggtcatt cttgccgccc gatccccgcc cgagctccct gatgacccac
    13801 cgcctgctgt tgccgatcac cgccgccgcg cttgtcctgc tgctggctgc caccgccgtg
    13861 gccgcccagg attacgacgc agatcacatt ccagcgctgc gctgcgaatc gcagttcaac
    13921 aagacccagc agtgcgccat cgaagtcccg atgcggctgg cccggcagct gtcggttacc
    13981 cgctgcgtgg agaaccagaa ctggggccag cgccgccgca tgctgtgggt cactgacggc
    14041 tgccgcgccg agttcgtcgc cgacgagtac ggtcgctggc ccgggcccgg gcgcggtcgc
    14101 ggtcgcgacg acgagggcga acgcctggtc tgcgagtcgt acgagaagaa ggacaaggaa
    14161 tgccgcatcc gcgtgcgcca cgaagtgcgc ctggtcaagc agaagtcggt gacgacctgt
    14221 gtcgaggacc gcaactgggg ctgggaccgc cgtggcatct gggtcagcga cggctgccgt
    14281 gccgagttcc gggtctattg actgccgagc acgcgctggc tgcggcggat cagtgatcgc
    14341 aaccggcgtg accgatagac tgcatgcaac cgcccgagga acgattgatg acaccgccgg
    14401 atccctccac gacgacgctg cagatccgcg acgcccgccc cggcgatgcc gccgcgctga
    14461 tcgcgctgga cagcgtggcg gcacatgatc cgcgacgggc gacgcagatc ggccagtggc
    14521 ttgcgcaggg ccatgtgcac gtggccgagc aggattgcgt ggctgtcggc tacctggtca
    14581 tccatcacca cttcttcggc gaagccttcg ttgaaatgct gatggtgggc ccggcacggc
    14641 gcggccaggg catcggtgcc gccctgcttc gccacgccat tgcgcgacgc ggcggcggca
    14701 agctgttcac ctccaccaac agctccaaca gcagcatgca gcgcctgctt gctgcgtcgg
    14761 gcttcgtcga cagcggcatc gtgcacggat tggacgaggg cgatgcggaa cggatctatc
    14821 gcttcgcggg tgattgatcg cgctgcgcca cgcgcacaaa aaagcccacg catcgctgcg
    14881 caggcttctt gattcatcac aatggtcggg acggccggat tcgaaccgac gaccctctgc
    14941 cccccaggca gatgcgctac caggctgcgc tacgccccga ctgatgctgc gatgtgcccg
    15001 ccagtgcggc gggccgtgaa gtatagcgga ttacgaagga aatgggatca gcggcgcagc
    15061 aactgcagca cttcttccag ctccatgcgc acctgcttga tgatctggtt gctcagcgcc
    15121 gattcctcgc gggcatcggg accgtccagg cgcaggcgtg caccaccgat ggtgtagccc
    15181 tgttcgtaca gcaggctgcg gatctgccgc accatcagca cgtcgtggcg ctggtagtag
    15241 cggcggttgc ctcggcgctt ggccggctca aggctgggaa actcggtttc ccagtagcgc
    15301 aggacgtgcg gcttgacgtc gcacagctcg ctgacttcac cgatggtgaa gtagcgcttg
    15361 gccgggatcg gcggtagttc gcggttactg cccggatcca gcataagctt ccaccctctc
    15421 cttgagcttc tggcccggac ggaaggtgac caccgtacgg gcggaaatcg gaatttcctc
    15481 gccggtcttg gggttgcgac ccgggcgctg gttcttgcgc cgcaggtcga aattaccgaa
    15541 gcccgacagc ttcacctgac gtccctgttc caatgcttca cgcagcacat cgaaaaacgc
    15601 gtcgacgaat tccttggctt cccgcttgtt cagaccgact tcgtcgaaca gcttttccgc
    15661 catctccgcc ttggtcaatg ccattgcctg ctacccccga gtgctgcccg ctcagccgcg
    15721 gatccgggcg tggtgttcac gctcgatggc agtgaccgcc tcggccacca ccgcatccac
    15781 gtcgcggtcc gtcagagtgc gcgacttgtc ctgcaaaatc aagcccatag cgagactctt
    15841 gaatcccggc tcgacgccct ggccgacata gcggtcgaac aggttcaggt cgcgcagcag
    15901 cggcccggcg gcctggcgga cggtggcggc cagatcggcc caggccacct gttcaggcac
    15961 caggaacgcc aggtcgcggc gcaccgccgg gtagcgcgac agctcgccgg cacgcggcag
    16021 gcggcgggcg gtcagcggct ccaggtccag ctcgaaggca tagacatcgg cctcgatctc
    16081 catcgccttg gccaggcgcg ggtggatctg gccgatccag ccgatcgcca cgccatcgcg
    16141 cagcacttcg gccgagcgca ccgggtggcc gtaggcacgg gccgacgagc ggaactccag
    16201 ctgcgcgcca ctggcggcgg ccagcgactc caggtcgccc ttcaggtcat ggaaatcgac
    16261 cttgcggctc ggcaggcccc actgcaccgc ctgcgcatcg ccacagaccg cggcggccac
    16321 acgcgcggtt tccagcggta ccggccggct ttcgccgggc gacgcgtcgc cggcctgctg
    16381 ggcgaacacc cgccccagct cgaacaggcg cacccggccc agctggcggg cggcattgcg
    16441 gccgagcgtg gcgaccaggc ccggcagcag cgacgggcgc atcaccgcca gttcggccga
    16501 cagcgggttg gccagcggca ccaggccgtc gcgcagctgc cactgggtca gcagcgcgtc
    16561 gtcgacgaag gcgaaattga cggtttcctg ctggtcacgg gcgatcagct ggcggcgcac
    16621 gctcagcgca tccagctggg tttcgctcgg catcgccacg cgcgaggcac cgcccggcag
    16681 cgtggtcggg atctgctcgt aaccgtggat gcgggccagc tcctcgatca ggtcttcttc
    16741 gatggcgatg tcgaagcggc ggctcggcgc ggccacctgc cagccatcgg tggtggcgac
    16801 cacgtccatg cccagcgcgc gcaggatgcg ctcgacttcc gcatcgtcga tggtgatgcc
    16861 gagcacgcgg gtgatgcggg cgcggcgcag cacgatggtt gccggctgcg gcagatcggc
    16921 ctcacgcacg gcctcggtga ccggtgccgg ggtgccgccg gccaggtcca gcaccaggcg
    16981 ggtggcgtat tcgatggcgg tgcgcggcag tgccggatcg acgccacgct cgaagcggtg
    17041 gccggcatcg gtgtgcaggc ccagcttgcg gccacggccc atgatcgcgg ccggtgcgaa
    17101 gtgcgcggcc tccaggaaca cggcggtggt ggcgtcggtg acgcgggtgt cgaagccgcc
    17161 catcaggccg gccaggccga ccgcgcggtc agcgtcggtc accaccagga agctgtcgtc
    17221 caacgcagca tcgcggccgt ccagcagctt cagcgtctcg cccgcgcgcg aacggcgcac
    17281 ggcgatgctg ccctgcaggg tgccgaggtc gtaggcatgc atcggctggc ccagttccag
    17341 catcacatac tgggtgatgt cgaccagcag cgacaccggg cgcacgccgc tgcggcgcag
    17401 gcgctcggcc atccacagcg gcgtcttcgc cgcagcgttg acgccctcga tgacacgacc
    17461 gaggtaacgc ggcgcttcgg caccggcatc cagctggatc gacagttcac ggctgctgac
    17521 ggccgcaatg gcgtcggcgg cgaaatccag cacttcgctg cgggtcgcgg cggcgacgtc
    17581 gaaggcgatg ccacgcaggc tgaagcagtc ggcgcggttc ggggtcagct tgatctcgat
    17641 gctggcatcg ggcaggccca ggtactcgac cagggcctgg ccgaccggag cgtcatcggg
    17701 cagttccagc aggccggatg catcgttgtc caggcccagt tccttggccg agcacagcat
    17761 gccgttggac tcgacgccgc gcagcttggc cggcttgatc ttcagctcgc cgatctgcgc
    17821 accaaccatc gccagcggcg cgaccaggcc cgggcgcgcg ttcggcgcac cgcagacgat
    17881 ctgcagcagc tcgccctgcc cggcatcgac cctgcacacc tgcaggcggt cggcttccgg
    17941 atggcggacg gcctcgacga tgcgcgccac gaccacgtga tcgaggcctt cgcccaacgc
    18001 ggtcacctct tccacttcca ggccgatggc ggtcagcacc gcactcagtt catcgcgcga
    18061 agcgctggtc gggacgtggc tgcgcagcca gttttcggag aatttcatgg tgtcaccctg
    18121 gtgggcccgg cgcatgcgcc tgggcctgcg aatttggaag ctgtcgtttt acgcgaactg
    18181 tttcaggaag cgcacgtcgt tctcgaagaa cgcgcgcagg tcgttgacgc cgtagcgcag
    18241 catcgcgaag cgctccacgc ccatgccgaa ggcgaagccg gtgtagcgct ccggatcgat
    18301 gccgacgttg cgcagcacgt tcggatgcac catgccgcag ccgagcactt ccagccagcg
    18361 cgtgctgcca tcgggctgct gccaggcgat gtccacttcc gcacccggtt caacgaacgg
    18421 gaaatagctg gggcggaagc gcatttcgaa atcgcgctcg aagaaggcgc gcacgaactc
    18481 ggccagcgtg cccttcaggt cggcgaaggt cgaatgctcg tccaccagca ggccttccac
    18541 ctggtggaac atcggcgagt gggtctggtc actgtcgctg cggtacacct tgcccgcggc
    18601 gatcatgcgc agcggcggcg catggtcgcc catgtagcgc acctgcacac ccgaggtatg
    18661 cgtgcgcagc aggcggccgt cgccgaagta gaaggtgtca tgcatcgcgc gcgccggatg
    18721 gtgcggcggg aagttcagcg cctcgaagtt gtgccagtcg tcctcgatct ccggcccttc
    18781 cgacagctcg tagcccaggc ggccgaagat gccggtgatg cgctccaggg tgcgggtgat
    18841 cgggtgcagg ccggcacgat cgccattgcg gcccggcagg gtgatgtcga tggcttcggc
    18901 cgccaggcgc gcgtccagcg ccgcgtcttc cagcagcgcc ttgcgctcgc ccagcgcgcg
    18961 ggtcagcgca tcgcgggcct ggttgatcgc ttcaccggca gccttgcgct cgtcggccgg
    19021 cagggcgccg agctgcttga gctgcgaggt gatgctgcca ctcttgccaa gcagggccac
    19081 gcgcagctgt tccagcacgt cggggctctg tgcggcggcc acatcggcca gcgcctgggt
    19141 ggtgagggat tggatgtcgc tcatgggggg ccggaactcc agtcgatctg ccatcgcgat
    19201 gcgcgaaggg ccgacccctg tcgccaccgc cgtccctgcg ctgccgctgt ggccgcgccg
    19261 ggacccaaaa aagaatgggg aaggacttgc gcccttcccc atgcattgcc ttgacctgac
    19321 accgttccga gtgaacggtt acggcatcgg gaaggactta tgccgccagc gcgcccttgg
    19381 ccttttcggc cagcgcggca aaaccggctg cgtcgtgcac ggcgatgtca gccaggacct
    19441 tgcggtccag ggtgatgccg gccttcagca ggccgttcat gaagcggctg tagctcaggc
    19501 cgttgatgcg ggcagccgca ttgatacggg tgatccacag cgaacggaag ttgcgcttct
    19561 tctgcttacg gccgatgtag gcgtactgct gtgccttgat gaccgcctgc ttggcgacgc
    19621 ggaagacctt gcgacgggca ttgtaatagc ccttggcgag atccaggatt ttcttgtggc
    19681 ggcgacgcgc ctgtacgcca cgcttaactc gtgccatttt tcagttcctc agaggtaagg
    19741 gagcatgcgg tccagacggc ctgcgtcttc tgcacggaca tggcccgtct gacgcagatt
    19801 acgcttacgc ttggtcgctt tcttcgtgag gatgtggcta cggttggcgt ggccgcactt
    19861 gtacttgccc gaggcggtct tgcggaaacg cttggccgct gcccggttgg tcttgatctt
    19921 gggcattgca atgtccttga tgggatttga ccctggtttc tgactgatct ggcggcggcc
    19981 tgggccgctc tttccgtcct gccatgatcg gcgtacgacc cgtcctgggt gggtcgagcc
    20041 gggcatgata caggcaaaac cgccctgtca ccagcccctg caaccctttc accggcaatt
    20101 caccgggatg ccgcaaaagc aaagggacgc catcggcgcc ccttcaccct gaaccattca
    20161 gccaggcgcc ccggaaggcg gccggtcagg cctcaggtct tcttcttcgg cgcgatcatc
    20221 atgaccatct gacgcccttc caggcgcgga cgggattcaa tgacgatgtc ctcgcccaga
    20281 tcggcctcga tccggttggc catttcgcgg cccagttcct ggtggctcat ttcacggcca
    20341 cggaaacgga tgttgacctt gatcttgtca ccatcttcga ggaactcacg catcttgcgc
    20401 agcttgatct ggtagtcgcc ctcgtccgtg accggacgga acttcacttc cttgatctcg
    20461 acctgcttgc tcttcttctt ggcctcgttg gccttcttct gcgcttcgaa cttgaacttg
    20521 ccgaagtcca tgatcttgca gaccggcgga tcggcctgcg gctggatctc gaccaggtcc
    20581 aggccttcat cttcggccat ggacagcgct tcgtcgcgcg acaacacgcc gatcatttct
    20641 ccgtcactgc cgatcacgcg gacgcgcggc acacggattt cctgattctt gcggttctgt
    20701 ttgttgtcag gggtgctgat attacgttct cccaagggta tcgaaccggt ccgggtgcct
    20761 gtgcgcccgg accggacctt tgcttacgcg ccctcggcgt ggagccgctc gatgaaggcc
    20821 tgcaggctca tgctgcccag gtcttcgcca gaacgcgtac gcaccgctac agcgccgttt
    20881 tccttctcgc ggtcaccaat gaccagcagg tacggcacgc gctgcaacgt atgctcgcgg
    20941 attttatagc cgatcttctc gttacgcaaa tccgagctga cgcggaagcc ttgctccgca
    21001 agggttttgg tcacgcccga gacgtattca gcctgggcgt cggtgatgtt ggccaccacc
    21061 acctgggtcg gcgccagcca ggccgggaac tggccggcgt ggtgctcgat caggatgccc
    21121 aggaagcgct ccatcgagcc gacgatggcc cggtgcagca tgaccgggtg cttcttctgg
    21181 ctgttctcgt ccacgtactc ggcgccgagg cggcccggca tcatgaagtc gacctgcatg
    21241 gtgcccagct gccaggtacg gccgatggcg tccttcaggt ggtactcgat cttcgggccg
    21301 tagaaggcac cctcgcccgg cagttcctgc cactccaccc cattgctgga cagtgccgag
    21361 cgcagcgcgc cttcggcctt gtcccaggtg gcgtcgtcgc ccaggcgcga ttccggacgc
    21421 agggcgatct tgacctggat ctcatcgaag ccgaagtgct ggtagaccgc cagcgcctgc
    21481 tggtggaacg cggtcacttc cgcctcgacc tggttttcgg tgcagaacac gtggccgtcg
    21541 tcctgggtga aaccacgcac gcgcaggatg ccgtgcagcg cgccggaggg ctcgttgcgg
    21601 tggcaggcac cgaactcgcc atagcggatc ggcaggtcgc ggtagctgtg caggccctgg
    21661 ttgaacacct gtacgtggcc cgggcagttc atcggcttga gcgcgtaggt gcgcttctcc
    21721 gattcggtga agaacatcgc gtcctggtag ttgtcccagt ggccggactt ctgccacagg
    21781 ctcacgtcta ggatctgcgg gcagcgcact tcgccgtagc cggtcttgcg atagaccttg
    21841 cgcatgtact gctcgaccac ctgccacagc gcccagccct tggggtgcca gaacaccagg
    21901 cccggggcct cttcctgcag gtggaacagg tcctgctgct tgccgatgcg gcggtggtcg
    21961 cgcatttcgg cttcttcgat gcgcttgatg tacgcctcaa gctgcttctt gtcggcccag
    22021 gcggtgccgt agatgcgctg cagctgctcg ttctgcgcgt caccgcgcca gtaggcgccg
    22081 gagatgcggg tcagcttgaa ggccttcagg aagcgggtgt tcggcacgtg cgggccacgg
    22141 cacatgtcca cgtattcctg gtggtagtac atgcccatcg cctggatgtc gtcggacatg
    22201 tcctcgatca ggcgcagctt gtagtcctcg ccacgggcct tgaagatctc gaccacttcg
    22261 gcgcgcggcg tcatcttctt gatgacgtcg tagtcctggg cgatcagctc gcccatgcgc
    22321 ttctcgatcg ccgccatgtc ttccggggtg aacgggcgct cggagtagat gtcgtagtag
    22381 aagccctcgg cgatcaccgg gccgatgacc atcttgacgt ccgggtacag ctgcttgacg
    22441 gcgtggccga tcaggtgggc gcaggagtgg cggatgatct ccacgccctc ctcgtccttg
    22501 gcggtgatga tgcgcaggct ggcatcgtgg tcgatgacat cgctggcatc gaccagcacg
    22561 ccatcgaccg agccggcgat ggtggccttg gccaggccgg cgccgatcga ctgggcgacg
    22621 tccatgacgc tgacggggtt ttcgaactcg cggcggctgc cgtcgggaag ggtgatattg
    22681 atcatcgcag tggcttcgtg cggggcccgc cgggcgggct ggaaagcgtt cccgggcgat
    22741 ggcccgggca ataaaaaagc gccgcgaggg cgcctggaac gcagggcctt cgggggcagg
    22801 tcaacagtgg gcggtggtag tgctcatgtc gcacgctcgg ccggcgctgg gcgcgggcca
    22861 ccttgttcca gtcaggggtc tgcgacgatc ttaaaccagc agggaggaaa gcccaagccg
    22921 gccggggcct gccgccggca atcgcggctg aatggccgcc gctggcgggg ccaaatatca
    22981 atgattacca tacgcaggcg tttctcactc gcgtgtgagg cgccccttcc tggccctgga
    23041 cccacccatg tatacgctgt cgctgccggc ccgtgccggc ctgctccgtg ccccactctc
    23101 cgccctcgcc cttgccgtct ccggcatgct tccgggcctg gccgcggccg acgaggcgcg
    23161 tacgctcgac accgtacagg tgactgcccc gatcgccacc gagagcggca gcgcgaccaa
    23221 gaccgatacc ccgctgcgcg agatcccgca gtcgatctcg gtcatcaccg accggcagat
    23281 gcgtgaccgt ggcatccatg gcgttgaaga ggcggtgtgg tacaccgccg gcgcccaggg
    23341 cggccagtac ggcgaagaca cgcgcagcga ctggctgctg gtccgtggtt tcaaacccgc
    23401 ccgctacctt gatggcctgg ccacggtgga aggcacctgg accggcgaat cacgcctgga
    23461 gccctatggc ctggagcgca tcgacgtgct gaagggcccg gcctcggtca actacggtgc
    23521 gatgccgccg ggcggcctga tcaacttcgt cagcaagcgg ccgcacgcca acccgttgca
    23581 ggaggtggag ctgcaggtcg gcaactacgg cctgaagcag gccgccttcg acatcggcgg
    23641 tgcgctcaat gacagcggca gcgtgctgta ccggctggtc ggcctggccc gcaacagcga
    23701 caacgtgatc gaccacgtcc atgacgatcg ctactacctg gccccctcgc tgacctggac
    23761 gccggacgat gccaacgcgc tgaccgtgct ggcccgctac cagaagaacg acacggtcga
    23821 aaccggcggc ttcctgcctt accagggcac ggtagtgccc ggcgccaacg gccgctatat
    23881 ctcccgccac ttcttcagcg gcgagccggg cgtgaacgac tacaccaagg aaagcgccgc
    23941 gctcggctat gaattccgcc atgacttcgg cgatggcacc gtgttcaacc agaacgtgcg
    24001 ctacagctgg gccgaagtgg acgccagccg cggcagcctg ggcctgttcg gcctggtgtc
    24061 gccggacagc accgagctgg tgcgctacta ctacccgcgc ctggacaagt ccgaaagcgt
    24121 ggccatcgac aacaacctga ccttccactt ccgcagcggc cgtgccgagc acacggtgct
    24181 ggcggggctg gactaccgtc gcgcgcgcaa cgattacgcc tcggcattcc tgttcggcgc
    24241 gcccggcatc gatgcctaca acccggtgta tggcgcgccg gtgcaggtgc ccgactacac
    24301 ctcgcgccag gtgcagacgc agagcacgct gggcctgtac ctgcaggacc agatccgcat
    24361 cgaccgctgg ctggtcacgc tggccggccg ccaggactgg gtcggtaccg ataccgagca
    24421 gcgcatcggc accgccagcc gcgcccacca gagcgatgac aggttctccg gccgggtggg
    24481 cgtgaactac ctgttcgaca atggcgtgag cccctacgtg agctggtcgc agtcgttcca
    24541 gaccaccatc ggcaccgact acgcgggacg tgcgttcgtg ccgaccaccg gcgagcagtt
    24601 cgaggccggc gtgaagtacc agcccgaggg tggccgcctg ctgctgaccg ccgcggcgta
    24661 ccagatcgag caggacaaca cgctcaccgt cgacccgcag cacaccctgt tctcgatcca
    24721 gcagggccag acccgcgtgc gcggtgccga gctggaaggg cgctggaaca tcggccaggg
    24781 cctgagcgtg tacggcagct acacccgcct cgacgccaag gtccggcgca gtaccgatgc
    24841 cgcttcggta ggcaagcggg tggccctggt gccgaaggaa agcgcgtcgc tgggcgccga
    24901 ctacaccttt accgccggcg cgctgagcgg gttcggcttc ggtgccggcg tccgctacaa
    24961 cggcggcatc tatggcgaca tctacaacga ctggtacacg ccgtcgttca ccctcatcga
    25021 tgccagcgtg cattacgacc gcggcccgtg gcgcctgcag gtcaatgccg ccaacgccgc
    25081 cgacaagaag tacgtgtcgg cctgcaacag cgcgacctgg tgctactacg gctacccgcg
    25141 taccgtcacc gccagcctgc gttaccaatg gtgagcccgc gatgatcacg gtaggcctgt
    25201 cgacgctggg attctgcagc ctgggcatgc tggcggcgat gttctcggcg ctggcgttct
    25261 atgccgcctc gccgcactgc cgctggccac gcctgcgccg cgccggacgc ctcggccacc
    25321 agatcggcct ggttgccgcc gccgcatcgc tgtggctgtg gatggccgag ctgggcttcg
    25381 ccgctggcct ggtcgcaatg ctgtgcacct ggatgctgtc ggcaatgctg ctgccggcac
    25441 tggccgcgtg gcatcgcccc ggcgcggaga caccgtgatg tgggcgcgcg cgtttgccgg
    25501 catattcgcc ggcttcttcc tggcggccgc cgccaccgga ctggtcacct ggctgccacc
    25561 gggcccgtgg cagaacgccc tggtgcctgc gctgatcgcc ttcgtgccgc tgtggatgct
    25621 ggcggctttg tgggccttca gtttccgccg cgctgggtat gcctggctgg ccctggccgg
    25681 cagcgcggcg gccggtttcg gtgtgctcgg gctgctgcgc atggccggcg ccgtgcaatg
    25741 agatcaatcg catgaagttc agctcgcaga ccctgcgcac gttcaccacc ctgcacacct
    25801 gggtcggcct ggtggccggc ttcgggctgt tcgtggcctt ctatgccggt gcgctgaccc
    25861 tgttccacca cgacctgccg ctgtggcaga cgccgggcgc ggccactgcg ttgcccgcca
    25921 gcctggatga cgcgcagtac ctgctggagg acgtgctggc cgcacatgcg gaagcacgcc
    25981 ggcatgtcgg catgaccttc cccggtgccg agcatccgca gccgctggcc tactggcagg
    26041 ccgacgacgg gggatggcgc tatgcctggc cggggcagac cgccggcagc ccgacgccgc
    26101 cgcagtcggg cctggccgaa ctggtcaacg agctgcacta cagcctgggc ctgccggtgg
    26161 ccggcatcta cgtgatgggc atcgtcagcc tgctgtatgg catggccctg ctcagtggcc
    26221 tggtgatcca tctgccgaaa ctgctcggcg acctgttcgc gctgcgcccg ggccgcaacc
    26281 tcaagcagct gtggcaggac gcacacaacg tgatcggtgt gctcagcctg ccgttccacc
    26341 tgatgttcgc ggtaaccggt gccctgctct gcctggtctt catccagatc gccctgctca
    26401 acccgctcat cttcgaaggc aaggccctgc aggcggtgcc gacggcgatg gacaccgcgc
    26461 ccgtgcgcgc cgccagcggc gtgccggccg ctccgggcag cctgcgcgaa ctgcatgcgc
    26521 gcgcgctgga agtggcgcgc gcgcagggcg tgaccgattt cgaaccggcc tacctgaaac
    26581 tggccaacgg cggtgatgcc aatgccacca tcgagatcac cggtgaatcc agcggcaccc
    26641 tcggcccgct cggctcggtc gcgctggacg tcgccagtgg ccgcctgctg gccagccagc
    26701 tgcccggcca ccgcgatgcc aaccacgcga cgctcagcgc ggcctatgcg ctgcattttg
    26761 gtgagttcgg caatggcgtg gtggtctggc tgtacttcct gctgggactg ggcggtgcct
    26821 tcctgttcta ttcgggcaac ctgctgtgga tcgaatcgcg gcgcaagcgc cggcaaccac
    26881 agcagccgcg ctccggggtg aacatggcgc gggccacggt gggcgtgtgc atcggcctgt
    26941 gcgtggcgat ctcggtcgcg ttcgccagcg ccctggtgct ggaacgggtg gcaccgtccg
    27001 ccgttgatca cggcatccgc tgggcctgtt tcggcagctg ggccgcgtgt gcgctgtggg
    27061 cagcactgcg ccgcccggcc caggcggcac gcgagctgct ctgggccgcc gcgatcagca
    27121 ccgcgctggt gccggtgctg catggcgccc tcagcggtga ctggttgtgg cgcgcggccg
    27181 cgcatgggca ctggccgctg ttctgggtcg atgcgatcgc actggccatg gcgttcggct
    27241 ttgcccggct ggcactggcc agccagcgtc gcgcgcgcaa cggcgatccc aacagcgtct
    27301 gggccaattg aggcgcccgc ccggc
//
LOCUS       DAOKIP010000034        26839 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.034,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000034 DAOKIP010000000
VERSION     DAOKIP010000034.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 26839)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 26839)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..26839
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.034"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            18..1058
                     /locus_tag="QEL58_001282"
     CDS             18..1058
                     /locus_tag="QEL58_001282"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017356462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleotide-diphosphate reductase subunit
                     beta"
                     /protein_id="HDS1675776.1"
                     /translation="MATPLDRIKILEPRHPNRSTGIINGRTSGILNWNDIPYPSFYRA
                     YKELSTNFWIPDEVDMKADARQYGELSGREKNAYDSIIGLLATLDSPQTRFIYNVAEY
                     ITDPAAHANAAIIGQQEVIHNESYSYVLASITDLPNQNRVFELARTHPTIIKRNAPIM
                     GAYDDFMREKTAETLLKSLIQSSILEGINFYSGFAYFYNMVRQNRMTGTGKIISFINR
                     DELAHTKFISELIRAIIGENPELQTNELTAYVHQAFEHAIELETQWSSEVLDGIDGID
                     VEEMTRYVKYRANKMAGMLGIERLYSDTTDNVMPWIKAYADNFTETKTDFFEMRNASY
                     KKTNVDNGFDDL"
     gene            1072..1551
                     /locus_tag="QEL58_001283"
     CDS             1072..1551
                     /locus_tag="QEL58_001283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007970875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin"
                     /protein_id="HDS1675777.1"
                     /translation="MRILLVVASLSGNTRELGRQIAGRCRAAGHVVHWQEADDLRQAP
                     PLAADEADLVLLGCWTDNAGRTPTEMKAWVAGIAERGERPRQLAVFGTGETQWGQEYY
                     CGAVHRLIRYFGSDYPPLEIEQMPHGERHAAAIEAWTDAVLAHYWSKTDADHRRHHA"
     gene            1523..1849
                     /locus_tag="QEL58_001284"
     CDS             1523..1849
                     /locus_tag="QEL58_001284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017156291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HDS1675778.1"
                     /translation="MQIIDATTPEQFQQLLAEHPRVLVDFHKDQCPGCRMLEMSLHRV
                     ANSVAGQGTTLLRVQLEVLGEAFFRELGLRQTPTLSLFRDGDERQRLPGFQSPQQIEA
                     AIALYL"
     gene            complement(1942..3273)
                     /locus_tag="QEL58_001285"
     CDS             complement(1942..3273)
                     /locus_tag="QEL58_001285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010485195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Nramp family divalent metal transporter"
                     /protein_id="HDS1675779.1"
                     /translation="MNTLAPRDPSASTPASLGALNASVAVPDKGHWWFRLLAFLGPGY
                     MISVGYMDPGNWATDLAGGSRFGYLLLSVILISNLMAVILQALSARLGIATGMDLAQA
                     CRARYPKPVNLALWALCEAAIIACDLAEVIGTAIALKLLFDLPLLWGAVITALDTLLV
                     LLLMNRGFRALEAFVIALLMVIFACFVVQIAMAAPPVMAVLGGFIPRAQVVTDPHALY
                     IAIGIIGATVMPHNLYLHSSIVQTRAYPRTDEGRRSALRWAVTDSTLALTLALFINAS
                     ILILAAAVFHANGRFDVEDIEQAHQLLAPMLGVGAAATLFAIALLASGLNSTVTATLA
                     GQIVMEGFLHLRLPPWLRRLITRALAIIPVVVVIVLFGDQGAVKLLVLSQVVLSMQLP
                     FAIIPLVRIVTDKVTMGALVAPRWLGSIAWVIALVIVVLNVKLLVDTFAGA"
     gene            3391..3861
                     /gene="mntR"
                     /locus_tag="QEL58_001286"
     CDS             3391..3861
                     /gene="mntR"
                     /locus_tag="QEL58_001286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006372477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="manganese-binding transcriptional regulator
                     MntR"
                     /protein_id="HDS1675780.1"
                     /translation="MGKTDDSTSLKSTPLIEAERQVESFRQVREAHRMELVEDYVELI
                     SDLLADGGEARQVDIATRLGVAQPTVAKMLRRLARDGWVVQRPYRGVFLTPEGEALAH
                     ASRQRHQTVERFLLALGVDADTARRDAEGIEHHVSEQTLALFEAFVRKAEGGAP"
     gene            complement(3975..4337)
                     /locus_tag="QEL58_001287"
                     /pseudo
     CDS             complement(3975..4337)
                     /locus_tag="QEL58_001287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037493.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="alkyl hydroperoxide reductase"
     gene            4331..4885
                     /gene="tadA"
                     /locus_tag="QEL58_001288"
                     /pseudo
     CDS             4331..4885
                     /gene="tadA"
                     /locus_tag="QEL58_001288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008267653.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="Flp pilus assembly complex ATPase component
                     TadA"
     gene            4893..6092
                     /gene="gspF"
                     /locus_tag="QEL58_001289"
     CDS             4893..6092
                     /gene="gspF"
                     /locus_tag="QEL58_001289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system inner membrane protein
                     GspF"
                     /protein_id="HDS1675781.1"
                     /translation="MALFDYQAANAQGRIEKGQLDADSPRSARQLLRGRGLTPVQVSA
                     ARAAGSGWGARRLSASELAWATRQLASLLAASLPLESALSAVIEQAERPHVAQALTAV
                     RADVRAGQRLTVALAARPRDFPPIYRALVGAGEDSGDLARVMERLADYIEERNALQAK
                     VLTAFIYPAAISLVSVAIVIFLLSYVVPQVVTAFVQARQTLPMLTQVMLAASAFVRSW
                     GVWVALCSGALVVAWRLALRRPELRLRWDAMLLRVPMVGRFVLGVNSARFASTLAILL
                     DAGVPLLRALEAARQTLGNALLARCADDVSARVREGTALGSALKVQKVYPPILVHLVA
                     SGEKTGSLAPLLDRAAQTISREIERRAMALTALLEPTMILVMGGVVLTIVLAVLMPIM
                     EMNQLVQ"
     gene            6310..7446
                     /locus_tag="QEL58_001290"
     CDS             6310..7446
                     /locus_tag="QEL58_001290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014647364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HDS1675782.1"
                     /translation="MNKYKTLAALVATALLATAGAASAQSLVQGGGASLPAKLYKGSA
                     DSILPANFSYEVTGSGTGKQAFLENRADLFKTTGTVHFAGSDSVLTDAEIAAYAANFA
                     PTYGPLIQIPSVGTSVTVPFNSAGGNLDLSVTQLCGVFAGTITNWSTLDANRSGPITV
                     VYRNEKSGTTELLTRFLASACSASDTAGSTLIGGKFSTTQEFWKQFSSLPANFTTASA
                     LGSQPLYDKVYATTGAIGYIGPDVVPNLSDATKIAKVRGFSPNDPSVQATLDTVLPPT
                     GAAANDVRNWAPVFTNPPAVGYPIVGYTTFELGQCYKAGNVALALRGFLLGHYNGNND
                     TASRAHGFVPLTPAWRDAIRNRFVLASSVNGVNNASACAGLGRP"
     gene            7680..20075
                     /locus_tag="QEL58_001291"
     CDS             7680..20075
                     /locus_tag="QEL58_001291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014647363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="filamentous hemagglutinin family protein"
                     /protein_id="HDS1675783.1"
                     /translation="MSHPLTTASRPSTLRRSHPMAWAVAVALGTVVAPASQAQQAFSP
                     AWFADRGAAQGAAAQSGRMPSGVPIQFQLPAQQQDAARQQLQQSIDNLGTAAQAIALQ
                     QRLQQEARQARRDAGFVVADGLGKDGLKVDENPLTRGWTNAREAIQAQGADGRVQVSI
                     EQTADKAILNWETFNIGANTTLNFLQNADWAVLNRVNDPNARPSQILGQLKADGSVFV
                     VNRNGVIFGNNGQVNVRNLVAAAARISDTQFRDEGLYSVNASSDALTEAFGKVMVERG
                     ARIATHEPTTATRGGGYVLLAGRSVENAGQIDTRKGQTQLAAGDSFVIRRGVGTAQNT
                     SSTTGGNEIAPRFVAGSTAGDVRNSGLIQAREGDITLAGRHVEQAGVAVATSTLNQRG
                     TVHLLTSASDGKASVTLGRDATTAILLEDDGKTTALDSQRQALLNESATQDKVRSTAA
                     QGAFDNLSRLQDRRDQSRVEIVSGGTVEAQAGSLTLATGGQIVVDARQRTLLGEGARV
                     DVSGATGVKVAMESNQLEINVQGNELRDAPDVRDAGTLNSSRVWVDRRGLIYVPAGTG
                     GHEGERWYAGGGLLEVSGYLGNQRHSIGEWAAQGGTVQLAGSEVVSAAGSRINLSGGS
                     LDVASGMLKESWLRGNDGQLYRLDDAPVDRGFAGLYRGFEVEQARWGITEAWRNPLIG
                     NESRYENGYTVGRDAGRLLVSAPSAVLEGQIDTAVFNGVRQTRAPGSSTDGYVQSQTA
                     VARGAQLWLGRYDGTGRNAVFDSQVRIGTAPAATARWSLQSALDESRRNTVWLDGAQL
                     SAQQWGRLDLATAGGIRVDGELALADGGQLNLVGGRVDINGQVRIGGGSLTASNLLAD
                     ATGRMQVVQANGRGVVALGEAAVIDLDGRWANQRLEGGAGSAQAWINGGRVQLESSHD
                     VSLAAGSRISVDAGGRVDLQGKASAGKGGDIALLADSSQVTTDGSGRLQLDGRLSGLG
                     GTGAGTLQLATGGKVTLADRARDDGSLWLSPTLLRSGFGQYDINGHAGLEVADGTQLD
                     VRAPTLRVRQAAADAATAGEGLEAWTAPLYAFDPGSGSVAQRQGASVLLRSQRNTLGG
                     DVRIGSNAVVQVDAGQSIELRGGGNIDVAGALIAKAGSIRLDDVRDNQQRYQIGGTPL
                     RYRIGSNALLDVSGDSFAAEDAAGRHQGVLHSGGSIGIGGTLDWESRDALENRPPDAF
                     VVVERGAVLDASGTRETLTVDGSGTRSVASDGGTIVLRSANGLYLDGTLRAAAGGVGA
                     QGGTLGVAFGGGVYERRAGAAELGPRAITLVQQSSDAAPGASTPLQHGHAELSAAQVQ
                     AGGFDHLSVFGDLRAQGDVDLRVGQSLRLYGLSDAAMGMATGSAAGTALHVQAPYVRL
                     AQARWFRDTSDNPFVAPVAARANAGEHSFSASAQVLDVRDTVDLAGFGNAHLASSGDL
                     RLLAKVSGNSNFFDTQLLAPSSLDITAAQIYPVAGTKGRIAVSIYDVLGGQNNWTDAK
                     GVLRIHGTGATPPAADSVFGSLALVAATVEQGGVVRAPLGQLVIGGLGPGNVASRITL
                     LPGSVTSSSAAGLSVPFGGTVDGQRWRLNGKDVSPSLVGMISAVDTVGVDLHANSVDI
                     QAGALLDLSGGGTLTGAGFVSGRSGSVDVRSHALRDANPAYTFSASSNAVYAIVPSYR
                     NGIAPLGLADGSADPGIGQRITVPEGVPGLAAGTYTLLPASYALQPGAFRVEVGAQGT
                     QQALATATGTGSWKVSGQQAQGLAPAASPLWTDLVLTPADVVRRHSGYNETGYNAFVQ
                     DDAARRGIARGMQSVDAGTLRLTLGAGAGLGTTDALRMQGMTRFAAEAGSKGFGGTVS
                     VVGNGGPSTLEVLGAGQRASAGSMAAIFADALTALQPSRLMVGVTLRPDATLPGTLNV
                     KSEGGGVLVRSGATLSAPEVILGAAAGGAGVVIEQGAVISTVGRGKPGYDATDGYLMK
                     LDATTGVLAVSNGQTNLLSGGAAARVAIDVGACRSDSCTGQTRLLSEGSINVSTEGGF
                     QLRDNVSYGTRRLGLSMTAINLGDAASLQAMAAQGALPQGLALNQQTLQQLLRGNTAL
                     GTPALETLSLSARDAINVFGSVDLDTRNPATGNSSLRELVLGAPAIHGYGKAGDQARI
                     YADTLVWDGTQAVSTVLTDGTPQAPGAAMVDRLGHGQLELNTRSLILGRAPYTRPSSE
                     VPANRQVLGFDGVSLRATQQVQFAGKGTLDVYQAQGAYQAGTGWQYSGGALDIQAPLL
                     TGAAGSTLQVRSGGDLRISGAGQTQGHDALGAELGLQARNILIDSAVALASGRLQARA
                     DGDVVLGSNARIDLAGRRIRMDDLDKYSWGGDVELTARQGNVLAAAGSSIDVSASNNR
                     AGRITANALGENAGRIDLAGTLRGSASGRQATGGSTVPYDSGELLLRAQQLSDFAGLN
                     RQLDAGGFFGTRSFQLKQGDLTVTDTLKARNVALSIDGGSLHVLGTIDASGEQVGSIR
                     LAARDRLQVDGRLDAHGSGLRVDSYGKIIDSSNRALVELGSRDGEVVLGSAARVDLRS
                     GTAVAQGTAPGQNDGVARGTFTLNVPRRGTDDAAVRAESGASVTGARDVLVNAFRRYT
                     DAPLAATPDVNGHRPQLVTQQWLDTVVDPHNQAWMNAALGNADLAARTAALGKVRLRP
                     GVEIVGQVSADNPTGNLTVRGDLDLSGYRYGPQANRNDPLRRGFGESAALVLRAAGDL
                     SIYGSINDGFAPPPANPDESGWMLGETADANTLRITPLGGDIVVPIDGVTLQAATRFP
                     KGAVLNYAIPVTQTDVPAGTVLPAEMRLGARLLLAAGTVLPAAVTLADGTVLAAGSLL
                     QQPLQLAAGDRLGAGFRLASKATLAAQLWPAGAALPEAMELSGAVALAPGSLIPSMTA
                     VKLPGGKPVNLRPADANGRQGRNWALAAMLPEGTTSWDVTAVAGADTSAADPRLRRLD
                     AKGDLILADSHYGTIGTVQKTSEWIGERVLTLDGALALIGDPSYANRPLKEVAEELGV
                     DEQTLCDAGEGFCGLAPRLVAKQASLDLVGDESAVGMSAKEFAEIFGMTEDSFCAITD
                     YCYGGGELIEKTIYGSKLGTPLWSVLRTGKGDLQLLAGRDVRMMSGFGVYTAGAPTSL
                     GNGRDAAFNPGRAPAPGLSTVLGPTDADGRYAAALGEWQAWYPDHGGNLTVSAGRDIR
                     GDLWDSAGQVGFDVTPRSQTEGAGFAPSAVGNWLWRQGSPGVAGAQPTATSWWVNFGS
                     YTSLPTLTGARMVGFMGFGTLGGGNLTLEAGRDAGVASGTVVNSLARHSSGVVAAVGS
                     TGRVEADGTLHLTGGGDLAVRLGGALNPNLALATSDPSLNQPNLPLSGALVNLRGRMQ
                     LDAARIGGMVTNVAHYVAPYSGLRQEDPFRAQLGDAMGGPVLVLGDAVATLQSRGDLV
                     LAGVADAGRVPVPSYNALALGDGRTAASSSWFSLWTANTAVDLISAGGDLAPGQQRGT
                     VMATAESGELFAEAVKQRGGADLRYWLYPSQLRMLAASGSIRLAETSTTGGDARDVLL
                     TAPSARGSLEVLAMDSILVPMRGADISSSGADVRLPSPFAPAFTAEVGATVIGNASVD
                     GVAGNPRASLPLFAFGPNAPLARELREGTSAPNRFYAVQGDIVGLRTGGQWTLDNAMG
                     TRSLLNWSDLSAPVQVRAGGDILVSSIGAMNTTATDITVVQAGRDVVRSTVRVAGPGN
                     VDVSAGRQLRFEDAGSVTTTGGLIQGDTRPGASVSLTAGDQHIAFDAVRARYLGAANL
                     ADPAQPLAAQPGKVAKIYDAELKQWLSQRFGMSVDDGSALAAFDALPKEQQHIFLRQV
                     FYAELREGGREYNDAEGPRFGSYLRGREAITTLMPDKDANGATLDRTGDIVMFGGSGV
                     RTEAGGNIELLAPGGQIVLGVAGEVPPASSGLITQGRGDIRLFSQDSVLLGLSRVMTT
                     FGGDILGWSEQGNINAGRGSRTTLLYTPPRRVYDRWGNVVLSPLAPATGAGFATLNPI
                     PEVPAGDVDLIAPLGTIDAGEAGIRVSGNINLAALQVLNAANIQVQGESKGLPVLATV
                     NVNALAAASAAANSASQAAQDVMRKSQDDARRNQPSVISVQILGFGSGTSSIQPPAHG
                     NTASGGYDDNSAFQFPQARRDEGKQRR"
     gene            complement(20296..20910)
                     /locus_tag="QEL58_001292"
     CDS             complement(20296..20910)
                     /locus_tag="QEL58_001292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012511250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HDS1675784.1"
                     /translation="MKRPVHGFTLIEVMIAITVMGVLALICWRAIDSVASSDQRLRQA
                     DAETTRALRAVQQFQRDVEMRADDALMNGAVRPADQPQRLLPPSLVSERHPDGSFALE
                     ITRSVGSDGLRWQRVRWWRQGDTLWRASGAATDRYPLPAPEPSKGIVVARAVQRFELR
                     AWQPGAGWASLPGEGEVLPATGLELRLELRDGRGALSYRRVVGL"
     gene            complement(20907..21269)
                     /gene="gspI"
                     /locus_tag="QEL58_001293"
     CDS             complement(20907..21269)
                     /gene="gspI"
                     /locus_tag="QEL58_001293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system minor pseudopilin GspI"
                     /protein_id="HDS1675785.1"
                     /translation="MKRNTRGFTLIEVLIALAIVSIALAAVMRSVAVATDDQSRLRDR
                     RLALMCAQDRWQELRLAGQVPQEARQRCLQGRSRFLVLQHLGTGADGQPQLELSVVAE
                     QSPRQSLARMQLPWTATP"
     gene            complement(21266..21712)
                     /gene="gspH"
                     /locus_tag="QEL58_001294"
     CDS             complement(21266..21712)
                     /gene="gspH"
                     /locus_tag="QEL58_001294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system minor pseudopilin GspH"
                     /protein_id="HDS1675786.1"
                     /translation="MLHIPRGFTLLELMVVLVIIGICTAGIGLGLGSLLDPARQLRQE
                     AERLAQRLQVARDEARIDGNTVRWQADADGYHFSRREGSRWVEVQRDDLLRPQKWQAA
                     GISVQPATAIELSPEWIGVAWEVRLSLDGRLLRLRDDGSGQLQVVQ"
     gene            21816..22289
                     /locus_tag="QEL58_001295"
     CDS             21816..22289
                     /locus_tag="QEL58_001295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014647359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="general secretion pathway protein"
                     /protein_id="HDS1675787.1"
                     /translation="MVQDMDRRWDRNRLLTVLAATLLLAVVAYWTVTLSAVAPAAVAS
                     EAPAEAAVRPVFAAAASLPLVRLLSPGAVQTEVVVLGVMAGEHSPLALLSVDGRPAEA
                     YAPGQRLGPCTVLASISASTVELNQAGQSRSLPVPELPPVPTDGIVPAAAQRGAP"
     gene            complement(22324..22659)
                     /locus_tag="QEL58_001296"
     CDS             complement(22324..22659)
                     /locus_tag="QEL58_001296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014647358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675788.1"
                     /translation="MSSSLKTGLHPALALALLLVVPPLQAGEAKQQDDAAPCIEVQVN
                     GERIPAWDCLQRKLAPAPKPARSPALPEAERLMRQPGNQLMQYNLEGTRQRMGDAFGR
                     SVVPQRPAR"
     gene            22861..24474
                     /locus_tag="QEL58_001297"
     CDS             22861..24474
                     /locus_tag="QEL58_001297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ShlB/FhaC/HecB family hemolysin
                     secretion/activation protein"
                     /protein_id="HDS1675789.1"
                     /translation="MTPVPSRAVRLPLRLHPLVLALAMMPLPLFAQQAPAPSVNINEY
                     IVRGNTVLDPRQIERAVEPFLGPGKTLADVEKARDAVNALYQQAGYQSVYVELPEQQV
                     SGGVVLLKVQQTPIGQLRVVGTRHESPERIRERVPALAEGKVPDFEQAQKELTALNEG
                     GRRQVMPLVREGQVPGTMDVDLQVEEKSPWRVSAALNNDRSADTEKLRLSTSLAYDNL
                     WQRGHSVNVGVYLAPQDTQQAKVFSASYMMPFEGTPWSLEASGYKSDSRVLNAGAQVG
                     TGSGTNVIGNGHSIGLKLNYRLAGSRQWWRQLSLGVDFKDTEEDTQMEKGSLKTPLKY
                     APITLAFVGVRQGEQDQLSINTQLVAGTRRLLGYGSDATAFGQKRFWADPSFVAFKAD
                     VANTHTFGSDWQWYARGSLQVTDAPLVSAEQFAAGGMYTVRGYLSAEAIGDYGGLASL
                     EWRTPAWSLWSGTDLRVYSFADAAYLRLRQPLPDQRDKYNLASVGLGAQLRLGEHLQL
                     RLDYAWPYADGPVTRKDDPRLHFNISTSY"
     gene            24513..26297
                     /locus_tag="QEL58_001298"
     CDS             24513..26297
                     /locus_tag="QEL58_001298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2341 domain-containing protein"
                     /protein_id="HDS1675790.1"
                     /translation="MDRLLSRVLLLLAALVALPAAAADANWWQAEWKYRKPITVDAGP
                     QGAGLAGDPGRTPLLLRLHTGNFGFDGTQDAGSDLRFVSGDGRTVLAHQIEQFDPKLG
                     LALVWVDVPAVSAAAPQTIWMYYGNDKAPASGNGQQVFDPDYTLVYHFAEANAPARDT
                     TAYGNNAGAVVPPSEGSVIGRGVQLGGGPLPLPASASLAQQAGAPLTVSAWIKPGSNS
                     AAQAIYARRDGAAELVLGIENRVPFVQLNGQRSTPAQPIPEGQWAHVALTAEKGTLQL
                     YLNGRVVAQLSGDLPALNTAAVVGADAAGAAQPLANFEGALDELRISRVARPAALLLA
                     DATAQGADSRLISYGADEQSAGQSHFGFILKAMPFDAWVVVAILGLMMLLSWAIMIAK
                     SRHFGRTSKANAVFTESFGKLSGVPLRTLSDMDRQGKAPTAMHEGSLWRIYQVAIDEM
                     QQRHQRDGNSGYLSAATIAAIRASMDAVMVREQEGMARRMNWLSTTIEGAPYVGLFGT
                     VIGIMLVFVVAAMAGAVDINSVAPGMAAALLCTAAGLGVAIPALFGYNYLGARAEAIG
                     ADMAVFIDEFAARLAEEQDGRGPAAVQG"
     gene            26308..26721
                     /locus_tag="QEL58_001299"
     CDS             26308..26721
                     /locus_tag="QEL58_001299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biopolymer transporter ExbD"
                     /protein_id="HDS1675791.1"
                     /translation="MGQKAKFGIKKREKGINVTPFVDVLLVVLVIFILTSNASIPGIE
                     VNLPKASNSVALEKPKTKAITIDPSGQVFLDAYPVTMAELEDRLRTERATTPDFPVIV
                     RGDAQVQYARVVEVLDLLRRLELAQVGLVTGKAQG"
     gene            26761..>26839
                     /locus_tag="QEL58_001300"
     CDS             26761..>26839
                     /locus_tag="QEL58_001300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005413633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferric siderophore transporter TonB"
                     /protein_id="HDS1675792.1"
                     /translation="MRGRQLLVTVALVLAALLVLGIAVWW"
BASE COUNT         4394 a         8907 c         9446 g         4092 t
ORIGIN      
        1 aacgaaggca gaaaaccatg gcaacccccc tcgaccgcat caagatcctc gaaccgcgtc
       61 atcccaaccg cagcacgggc atcatcaacg gacgcaccag cggcatcctg aactggaacg
      121 acattccgta tccgtcgttc tatcgggcct acaaggaact gtcgaccaac ttctggattc
      181 ccgacgaagt cgacatgaag gccgatgcgc gccagtacgg cgagttgtcg gggcgcgaga
      241 agaatgccta cgactcgatc atcggtctgc tcgccacgct ggattcgccg cagacccgct
      301 tcatctacaa cgtggccgag tacatcaccg atccggccgc gcatgccaac gcggcgatca
      361 tcggccagca ggaggtgatc cacaacgaga gctacagcta tgtgctggcc tcgatcaccg
      421 acctgccgaa ccagaaccgc gtgttcgagc tggcgcgcac ccatccgacc atcatcaagc
      481 gcaacgcgcc gatcatgggc gcgtatgacg acttcatgcg cgagaagacc gccgagacgc
      541 tgctgaagtc gctgatccag tcctcgatcc tggaaggcat caatttctat tccggtttcg
      601 cgtacttcta caacatggtg cggcagaacc gcatgaccgg caccggcaag atcatcagct
      661 tcatcaaccg cgacgagctg gcccacacca agttcatcag cgagctgatc cgcgccatca
      721 tcggcgagaa cccggagctg cagaccaacg aactgaccgc ctatgtgcac caggcgttcg
      781 agcatgccat cgagctggag acccagtggt cgtcggaagt gctggatggc atcgacggca
      841 tcgatgtgga ggagatgacg cgctacgtga agtaccgggc caacaagatg gccggcatgc
      901 tcggcatcga gcgcctgtac agcgacacca ccgacaacgt gatgccgtgg atcaaggcct
      961 acgccgacaa cttcaccgag accaagaccg acttcttcga gatgcgcaat gcaagttaca
     1021 agaagaccaa cgtcgacaac ggcttcgacg acctctgagc ccagcgcggc gctgcgcatc
     1081 ctgctggtgg tggcctcgtt gagtggcaac acccgcgagc ttggccggca gattgccggg
     1141 cgctgccggg ctgcgggtca tgtcgttcac tggcaggagg cggatgacct gcgccaggcg
     1201 ccgcccttgg cggccgacga ggccgacctg gtgctgctgg gctgctggac cgacaacgcc
     1261 ggccgcacgc caacggagat gaaggcgtgg gtggccggca ttgccgagcg cggcgagcgg
     1321 ccgcggcagc tggcggtgtt cggcaccggc gagacacagt gggggcagga gtactactgc
     1381 ggcgccgtgc accgcttgat ccgttatttc ggcagcgact acccgccgct ggagatcgaa
     1441 cagatgccgc atggtgagcg ccatgccgcc gccatcgagg cctggaccga tgcggtcctg
     1501 gcccattact ggagcaagac cgatgcagat catcgacgcc accacgcctg agcagttcca
     1561 gcagctgctg gccgaacacc cgcgggtgct ggtggacttc cacaaggacc agtgcccggg
     1621 atgccggatg ctggagatgt cgctgcatcg ggtggcgaac agtgtggcgg ggcagggcac
     1681 gaccctgttg cgggtgcagc tggaggtgct gggcgaggcg ttcttcaggg aactggggct
     1741 gcggcagacg ccgacgttgt cgctgttccg tgacggagac gagcggcagc gcctgcctgg
     1801 attccaatcg ccgcagcaga tcgaggcggc catcgcgttg tatctgtagg ccgcgatccc
     1861 ggcttttgta gagtcgagcc atgctcgact gttgttcgca cggtgcgcga tgagtcgagc
     1921 atggctcgac tctacaacgg gctatgcgcc ggcgaaggta tccaccagca gcttcacgtt
     1981 caacaccacg atcaccagcg cgatgaccca cgcgatgctg cccagccagc gtggcgccac
     2041 cagtgcgccc atcgtcacct tgtcggtcac gatccgcacg agcggaatga tcgcgaacgg
     2101 cagctgcatc gacagcacca cctggctcag caccagcagc tttaccgcgc cctggtcgcc
     2161 gaacagcacg atcaccacca ccaccggaat gatcgccagc gcccgggtga tcaagcgccg
     2221 cagccacggc ggcaggcgca ggtgcaggaa gccttccatc acgatctgcc cggccagcgt
     2281 ggcggtcacc gtggagttca gtcccgaggc cagcagggcg atcgcaaaga gggtggccgc
     2341 cgcgcccacg cccagcatcg gcgccagcaa ctggtgcgcc tgctcgatgt cttccacatc
     2401 aaagcggccg ttggcgtgga acaccgccgc ggccaggatc aggatgctgg cattgatgaa
     2461 cagcgcgagg gtcagcgcga gggtgctgtc ggtgactgcc caacgcaacg cgctgcggcg
     2521 cccttcatcg gtgcgcgggt aggcgcgggt ctgcacgatg gacgaatgca ggtacaggtt
     2581 gtgtggcatc accgtggcgc cgatgatgcc gatggcgatg tacagcgcat gcggatcggt
     2641 caccacctgc gcacgcggga tgaagccgcc gagtaccgcc atcaccggtg gcgcggccat
     2701 tgcgatctgc accacgaagc aggcgaagat caccatcagc agcgcgatca cgaaggcttc
     2761 cagtgcacgg aagccgcggt tcatcagcaa cagcaccagc agcgtatcca gcgcggtgat
     2821 caccgcaccc cacagcagtg gcaggtcgaa cagcagtttc agcgcgatcg cggtgccgat
     2881 cacctcggcc aggtcgcagg caatgatcgc cgcttcgcac agcgcccata gcgccaggtt
     2941 caccggcttg gggtagcgcg cgcggcaggc ctgggccagg tccatgccgg tggcgatgcc
     3001 gagccgcgcc gacagcgcct gcaggatcac cgccatcagg ttggaaatga ggatgaccga
     3061 cagcagcagg tagccgaagc gcgagccgcc ggccagatcg gtggcccagt tgcccgggtc
     3121 catgtagccg accgagatca tgtagcccgg gccgaggaag gccagcaggc ggaaccacca
     3181 atggcccttg tcaggcaccg ctacagacgc gttgagcgcg cccaggctgg ccggagtgga
     3241 ggccgaaggg tcgcggggcg ccagggtgtt cataggtccg aatatagctc ctgctatagt
     3301 cattagcaat gtgaaacaat cgtctttatc gcgttactgg tccagaattc aggttcaaca
     3361 ccggagtaca ccggaaggac aggcgcaggc gtgggcaaga ccgacgattc gacatcgctg
     3421 aagagcaccc ccttgatcga ggccgagcgc caggtcgaga gcttccggca ggtacgcgag
     3481 gcgcaccgga tggagctggt ggaggactat gtcgagctga tctcggacct gctggccgac
     3541 ggcggcgagg cccgccaggt cgacatcgcc acgcgcctgg gcgtggccca gccgacggtg
     3601 gcgaagatgc tgcggcgcct ggcccgtgac ggctgggtgg tgcagcggcc gtaccgtggc
     3661 gtgttcctga cgccggaagg ggaggcgctg gcgcatgcca gccgccagcg ccatcagacc
     3721 gtggagcgtt tcctgctggc gctgggcgtg gacgcggata ccgcgcgccg cgatgccgag
     3781 ggcatcgagc accatgtcag cgaacagacg ctggcgttgt tcgaggcgtt cgtgcgcaag
     3841 gccgagggcg gggcgccgta gcggaagcgc cgggcaatgc ccggcggcat ttcgcgcgat
     3901 cccggtttct gtagtgtcga gccatgctcg acggctgttc gcgcgatgcg tgctgagtcg
     3961 agcatggctc gacgctacag atcaggcggg caacgggcct gttgctgcgc gcacgcctgc
     4021 ttcgtccatt ccttcaacac cggctgcagt ccttcgtagc gccggccttg ccagccattg
     4081 gcaagcacat tgccatcggc gtcgatcagc acaagattgg gcgggcccag ccccgccagg
     4141 gcctgcagcg cgggcatccg cctggcgcgg cgcgggtcca gcaccggcca cggcatgtcc
     4201 tgcgcgtgca tgtagcgccg caacgcggcc tcgctttcgt ccaggctgac gtacaccact
     4261 tcggtatcgg cgccggcctc gcgcagggca ttacgtacac tgcgcagggt cggcacgaag
     4321 gcatggcagg gcgcgcatcg gcatgagttt cggcaccgcg ctgcgcgcga tcctgcgcca
     4381 ggacccggat acgatcatga tcggcgaaat ccgcgacctg gaaaccgcgc agattgcggt
     4441 gcagtcatcg ctgaccgggc atggcgttct ggcctcgctg cacaccaacg acgcgatctc
     4501 ggcggtgacc cgtttggccg acatgggcgt ggagccgttc cttctggcct cgtcgctgcg
     4561 cggcgtactg gcgcagcggc tggtgcggcg cctgtgcacc cagtgccggc gtgcagaggt
     4621 ggatggcgag ggccgtaccg tgtggcgcgc ggtgggctgc gcggcgtgcg cgaacagcgg
     4681 ctatcgcggg cgcaccggta tccatgaact gttcgtggtc gatgagcgcg tgcgcgccct
     4741 gatccatgaa gggcagggtg agcctgcgct gcgggaggcg gcgcggcgtg ccggcatgcg
     4801 caacctgcgc gaggatggcc agcgctgggt cgacagcggc gtgaccacgc tggaagagat
     4861 cctgcgcgtt accggcgacg cctgaggcga cgatggcact gttcgactac caggccgcca
     4921 atgcgcaggg ccgcatcgag aaaggacagc tggatgccga cagcccgcgc agcgcgcgtc
     4981 agctgctgcg cggacgcggg ctgacaccgg tacaggtgag tgcggcacgc gctgcaggca
     5041 gtggctgggg cgcacgccgc ctgtccgcca gcgagctggc ctgggccacg cgccagttgg
     5101 ccagcctgct ggccgcaagc ctgccgctgg aaagcgcgct gagcgcggtg atcgagcagg
     5161 ccgagcgccc gcacgtcgcg caggcgctta ccgcggtgcg tgccgacgtg cgcgccggcc
     5221 agcgcctgac cgtggcactg gccgcgcggc cgcgtgattt cccgccgatc taccgtgcgc
     5281 tggtcggtgc gggcgaagac tccggtgatc tggcccgggt gatggagcgt ctggccgact
     5341 acatcgagga gcgcaatgca ctgcaggcca aggtgctgac ggccttcatc tacccggcgg
     5401 cgatcagcct ggtatcggtg gcgatcgtga tcttcctgct cagctacgtc gtgccgcagg
     5461 tggtaaccgc gttcgtgcag gcgcggcaga cgctgccgat gctgacccag gtgatgctgg
     5521 ctgccagcgc gttcgtgcgc agctggggcg tgtgggtggc gctgtgcagt ggcgcgctgg
     5581 tggtggcgtg gcggcttgca ctgcgccggc cggagctgcg cctgcgctgg gatgcgatgc
     5641 tgctgcgcgt gccgatggtc gggcgcttcg tgctgggcgt gaacagtgcg cgctttgcct
     5701 cgacgctggc gatcctgctc gatgccggcg tgccgctgct gcgtgccctg gaggcggcgc
     5761 ggcagacgtt gggcaatgca ctgctggcgc gctgcgccga cgacgtatcc gcgcgggtac
     5821 gcgaaggcac ggcgctgggc tctgcgctga aggtgcagaa agtctatcca cctatcctgg
     5881 tgcacctggt ggccagtggc gagaaaaccg gttcgctggc gccactgctg gatcgcgctg
     5941 cgcagacgat ttcacgcgag atcgagcgcc gggcgatggc gctgaccgca ctgctggaac
     6001 cgaccatgat cctggtgatg ggcggcgtgg tactgaccat cgtactggcg gtgctgatgc
     6061 cgatcatgga gatgaaccag ctggtccagt agatgcacgc cctgcgcgga tggatcaccc
     6121 gattctccac acaatcctcc acaccttttc ctgatcttcc acaggtttct taagcgggct
     6181 gtcatcggcg cagaccagca tggacacgtc gccgcagagt gggctgggag gccctcggcg
     6241 gcagcaggcg tgaagtgacc gttcctccct tggtgtttcc cttcgcagta aacccttcag
     6301 gagaagatca tgaacaagta caagaccctg gccgcgctgg ttgccaccgc gctgctggcc
     6361 accgccggcg ccgcctcggc gcagtcgctc gtgcagggcg gtggcgcgtc gctgccggcc
     6421 aagctgtaca agggttcggc cgacagcatc ctgccggcca acttcagcta tgaagtgacc
     6481 ggctcgggca ccggcaagca ggccttcctg gaaaaccgtg ccgacctgtt caagaccacc
     6541 ggcaccgtgc atttcgccgg cagcgactcg gtgctgaccg acgctgagat tgccgcctac
     6601 gccgccaact tcgccccgac ctacggcccg ctgatccaga ttccgtcggt cggcacctcg
     6661 gtcaccgttc cgttcaatag cgccggtggc aaccttgacc tgagcgtcac ccagctgtgc
     6721 ggcgtgttcg ccggcacgat caccaactgg agcaccctgg acgcgaatcg ttcgggcccg
     6781 atcaccgtcg tgtaccgcaa cgagaagagc ggcaccaccg aactgctgac ccgtttcctg
     6841 gccagcgcct gctcggccag cgacaccgcc ggcagcaccc tgatcggcgg caagttcagc
     6901 accacccagg agttctggaa gcagttctcg tcgctgccgg cgaacttcac caccgcttcg
     6961 gcgctgggca gccagccgct gtatgacaag gtctacgcca ccaccggtgc gatcggttac
     7021 atcggcccgg acgtggtgcc gaacctgagc gacgccacca agatcgccaa ggtgcgtggc
     7081 ttctcgccga acgacccgag cgtgcaggcc accctggaca cggtgctgcc gccgaccggc
     7141 gctgctgcca atgacgtgcg caactgggcc ccggtgttca ccaacccgcc ggccgtcggt
     7201 tatccgatcg tgggttacac caccttcgag ctgggccagt gctacaaggc cggcaatgtt
     7261 gcgctcgccc tgcgcggctt cctgctgggc cactacaacg gcaacaacga taccgcgtcg
     7321 cgtgcccacg gtttcgttcc gctcaccccg gcctggcgtg atgccatccg caaccgcttc
     7381 gtgctcgcca gcagcgtcaa cggcgtgaac aacgccagcg cctgcgccgg cctcggccgc
     7441 ccgtaatcgc gtcgaacgca gtgcttgaac cgagcgccgg ccgtgaggcc ggcgctctct
     7501 tgcgtgtggc tgccggcgcc ggaccgggca tgtatccggc ccattcccgc atcggcggcg
     7561 ctgtcttttg atgtcggctt cacgcagccg tccccgtctt acagaagcag ggcgcgtgcc
     7621 gcccgatcct tcagagcgcg ccgtgatcgc ggccgcccaa ccaggttgac gaggttcaga
     7681 tgtcgcatcc gctcacgacc gcttcgcgcc cgtccacgct gcgccgcagc cacccgatgg
     7741 cctgggccgt cgccgttgcg cttggcacgg tggtggcgcc ggccagccag gcccagcagg
     7801 ccttcagccc ggcctggttt gccgaccgcg gtgccgccca gggcgcggcc gcgcagagtg
     7861 gacgcatgcc cagcggggtg ccgatccagt tccagctgcc cgcgcagcag caggatgcag
     7921 cccgccagca gctgcagcag tcgatcgaca acctgggaac cgccgcacag gccatcgcgc
     7981 tgcagcagcg gctgcagcag gaagccaggc aggcacggcg tgacgcggga ttcgtggtcg
     8041 ccgacgggct gggcaaggac ggcctgaagg tggatgagaa cccgctgacg cggggctgga
     8101 ccaacgcccg cgaggccatc caggcgcagg gcgccgatgg ccgcgtgcag gtcagcatcg
     8161 aacagaccgc agacaaggcg atcctgaact gggagacctt caacattggt gccaatacca
     8221 cgttgaactt cctgcagaac gcggactggg cggtgttgaa ccgggtcaac gatcccaacg
     8281 cacggcccag ccagattctc ggccagctga aggccgacgg cagcgtgttc gtggtcaacc
     8341 gcaacggcgt gatctttggc aacaacggcc aggtgaacgt gcgcaacctg gtggcggcgg
     8401 cggcgcggat cagcgacacg cagttccgtg atgaaggcct gtacagcgtc aacgccagtt
     8461 cggatgcgct gaccgaggcg ttcggcaagg tgatggtgga gcgaggtgca cgcattgcca
     8521 cccatgagcc caccacggcc acgcgcgggg gcggctatgt cctgttggca gggcgcagcg
     8581 tggagaatgc cggccagatc gacacccgca agggccagac ccagctcgcc gcgggcgaca
     8641 gcttcgtgat ccggcgcggc gtgggcacgg cacagaacac gtcgtccact acaggtggca
     8701 acgagatcgc gccgcgcttc gtggcgggca gcacggcagg cgatgtgcgc aacagcggcc
     8761 tgatccaggc acgcgaaggc gacatcacgc tggccggacg tcatgtcgag caggccggcg
     8821 tcgcggtcgc caccagcacc ctgaaccagc gcggcaccgt gcacctgctc acctccgcca
     8881 gcgatggcaa ggccagcgtg accctcggcc gcgatgccac cacggccatc ctgcttgagg
     8941 acgatggcaa gaccaccgcg ctcgacagcc agcggcaagc actgctgaac gagtcggcca
     9001 cccaggacaa ggtgcgcagt accgccgcac agggcgcgtt cgacaacctg tcgcggctgc
     9061 aggatcggcg cgaccagtcg cgcgtggaaa tcgtctccgg tggcacggtc gaggcccagg
     9121 ccgggtcgct gaccctggcc accggcggcc agatcgtggt cgacgcgcgc cagcgcacgc
     9181 tgctgggcga aggcgcacgc gtggatgtat ccggtgccac cggggtgaag gtggcgatgg
     9241 agagcaacca gctggaaatc aacgtgcagg gcaacgaact gcgcgatgcc ccggacgtgc
     9301 gcgatgccgg cacgctcaac agcagccggg tctgggtcga ccggcgcggc ctgatctacg
     9361 tgccggccgg taccggcggc catgaaggcg aacgctggta tgccggcgga gggctgctgg
     9421 aagtgagcgg ctacctgggc aaccagcgcc actccatcgg cgaatgggcc gcgcagggcg
     9481 gcaccgtgca gcttgccggc agcgaagtgg tcagcgccgc gggttcgcgg atcaatctgt
     9541 ccggcggcag cctcgatgtg gccagcggca tgctcaagga gagctggctg cgcggcaacg
     9601 atggacagct gtatcgcctg gacgacgcgc cggtggatcg tggattcgcc ggcctgtatc
     9661 gcggttttga agtggaacag gcgcgctggg gcatcaccga agcctggcgc aatccgttga
     9721 tcggcaatga atcgcgttac gagaatggct acacggtggg acgcgatgcc gggcggctgc
     9781 tggtttcggc gccctccgcg gtgctggagg ggcagatcga tactgccgtg ttcaatggcg
     9841 tgcggcagac gcgggcaccg ggcagcagca ccgatggcta cgtgcaatcg cagacggcgg
     9901 tggcacgcgg cgcacagctg tggctggggc gctacgacgg taccggccgc aatgcggtgt
     9961 tcgactcgca ggtgcgcatc ggcacggccc cggcggccac cgcacgctgg agcctgcaaa
    10021 gcgcgctgga tgagagccgg cgcaacaccg tctggcttga tggtgcacag ttgagcgccc
    10081 agcagtgggg ccggctggac ctggcgacgg caggcggcat ccgcgtcgac ggtgagctgg
    10141 cccttgccga tggcgggcag ctgaacctgg tcggtggccg cgtcgacatc aacggccagg
    10201 tccggattgg cggtggcagc ctgactgcaa gcaacctcct ggccgacgct accggccgca
    10261 tgcaggtggt gcaggccaac ggtcgtggtg tggtcgcatt gggcgaagcg gcggtgatcg
    10321 acctggacgg gcgctgggca aaccagcgcc tggaaggcgg cgccggcagc gcgcaggcat
    10381 ggatcaacgg cggtcgcgtg cagctggaaa gcagccatga tgtgtcgttg gccgcaggca
    10441 gccgcatcag tgtcgatgca ggtggacgcg tcgacctgca gggcaaggcc agtgcaggca
    10501 agggcggtga catcgccctg ctggccgaca gcagccaggt gaccaccgac ggcagtgggc
    10561 gcttgcagct ggacgggcgg ctcagcggcc tgggcggcac gggggccggc accctgcagc
    10621 tggcgaccgg gggcaaggtg acgttggctg accgggcccg cgacgatggc agcctgtggc
    10681 tgtcaccgac gctgctgcgc agcggattcg gccagtacga catcaacggc catgccgggc
    10741 ttgaggtggc cgatggcacc cagctggacg tgcgcgcacc gacgttgcgc gtgcgccagg
    10801 ccgctgccga tgcagcgacc gcaggcgagg gcctggaggc ctggacggca ccgctgtatg
    10861 ccttcgaccc gggcagcggg tcggttgccc agcggcaggg cgcaagcgtg ctgctgcgct
    10921 cgcagcgcaa tacgctgggc ggagatgtaa ggatcggcag caacgcggtc gtgcaggtcg
    10981 atgccgggca gtcgatcgag ctgcgcggcg gtggcaacat cgacgtggcc ggtgcgctga
    11041 tcgcaaaggc aggcagcatc cgcctcgacg atgtgcgcga caaccagcag cgctaccaga
    11101 tcggcggcac cccgttgcgc tatcgcatcg gcagcaacgc gctgctggat gtgtccggcg
    11161 acagcttcgc cgcggaggac gccgcgggtc gccaccaggg cgtgctgcac tcgggcggca
    11221 gcatcgggat cggcggtacg ctggactggg agtcgcgcga tgcgctggag aaccgtccgc
    11281 cggatgcctt cgtggtggtc gagcgcggcg cggttctgga tgcgtccggt acccgtgaga
    11341 cgctgaccgt ggatggcagt ggcacccgct ccgtggccag cgacggcggc acgatcgtgc
    11401 tgcgctcggc caatggcctg tacctggatg gcacgctgcg ggcggcggcc ggtggcgtgg
    11461 gcgcgcaggg cggcacgctg ggcgtggcct tcggtggtgg ggtgtacgag cgccgggcgg
    11521 gcgctgcgga gcttggcccg cgtgcaatca ccctggtgca gcagtccagc gatgcagccc
    11581 ctggcgcgtc cacgccattg cagcacgggc acgccgagct gtcggcggca caggtgcagg
    11641 ccggtggctt cgaccatctt tcggtgttcg gcgatcttcg cgcgcagggg gatgtcgacc
    11701 tgcgcgtggg gcagagcctg cgcctgtacg ggctgagcga tgccgcgatg ggcatggcca
    11761 ccggcagcgc ggcgggaacg gcattgcacg tgcaggcgcc ttatgtgcgc cttgcgcagg
    11821 cgcgctggtt ccgtgacacc tcggacaatc cctttgtggc gccggtggca gcccgtgcca
    11881 atgccggtga acacagtttc agtgcctcgg cacaggtgct ggacgtacgc gatacggtcg
    11941 acctggccgg cttcggcaac gcccacctcg ccagcagcgg cgacctgcgg ctgctggcga
    12001 aagtcagtgg caacagcaac ttcttcgata cccagctgct ggcgccgtcg agcctggaca
    12061 tcacggccgc gcagatctat ccggttgcag gaaccaaggg ccgtatcgcg gtatcgatct
    12121 acgatgtgct gggtggacag aacaactgga ccgatgccaa gggcgtgctt cgcatccatg
    12181 gcaccggcgc cacgcctcct gcggccgatt cggtgttcgg ttcgctggcg ttggttgccg
    12241 ccacggtcga gcagggaggc gtcgtgcgcg cgccgctggg acagctggtg atcggcggcc
    12301 tgggcccagg caatgtcgcg tcgcgtatca cgctgttgcc cggcagtgtg acctcaagca
    12361 gcgcagccgg cctcagcgtt cccttcggtg gcaccgtgga tggccagcgc tggcgcctga
    12421 acggcaagga tgtcagcccc agcctggtgg gcatgatcag cgccgtggac acggtgggtg
    12481 tcgacctgca tgccaacagt gtcgacatcc aggccggtgc gctgctggac ctgtccggtg
    12541 gcggcacgct gaccggcgca gggttcgtca gtggccgcag cggctcggtg gacgtgcgca
    12601 gccacgcact gcgtgacgcc aatccggctt acaccttcag cgccagcagc aacgcggtgt
    12661 atgccattgt cccgtcctac cgcaacggca tcgcgccgct gggcctggcc gacggcagcg
    12721 ccgacccggg catcggccag cgcatcaccg tgcctgaagg ggtgccgggc ctggcggcgg
    12781 gcacctatac gttgctgccg gcgtcctacg cgctgcagcc gggcgcgttc cgggtggaag
    12841 taggggcgca gggcacgcag caggcgttgg ccaccgccac cggaaccggc tcgtggaaag
    12901 tgagcggcca gcaggcgcag gggcttgcgc ctgccgcatc gccgttgtgg acggacctgg
    12961 tgctgacccc ggccgacgtg gtgcgccgcc actccggcta caacgaaacc ggctacaacg
    13021 cgttcgtgca ggacgatgcg gcgcgccgtg gcatcgcgcg tggcatgcag tcggtggacg
    13081 ccggcacgct gcggctgacg ctgggcgccg gtgcaggcct gggcaccaca gacgcactgc
    13141 gcatgcaggg catgacacgt ttcgcggccg aggctggcag caagggcttc ggcggtacgg
    13201 tgtcggtggt cggcaatggt ggcccgagca cgctggaagt gctgggtgca ggccagcgcg
    13261 ccagcgcggg cagcatggcg gccattttcg ccgacgcgct cacggcgttg cagccctcgc
    13321 gcctgatggt cggtgtgacc ctgcgtccgg acgccactct gcccggcacg ctgaatgtga
    13381 aatcggaagg cggcggcgtg ctggttcgtt ccggtgcaac gctgagcgcc cctgaggtga
    13441 tcctgggcgc agcagccggt ggcgcgggcg tggtgatcga gcagggcgcc gtgatcagta
    13501 cggtcgggcg tggaaagccc ggctacgacg ccaccgatgg ctatctgatg aagctcgacg
    13561 cgaccacggg cgtgctggcc gtgtccaacg gccagaccaa cctgctgtcg gggggcgcgg
    13621 ccgcccgggt ggcgatcgat gtgggcgcct gccgcagcga cagctgcacc gggcagaccc
    13681 ggttgctgtc cgagggcagc atcaatgtca gtaccgaggg cgggttccag ctgcgcgaca
    13741 atgtcagcta tggcacgcgc cggttgggcc tgtcgatgac cgccatcaac ctcggtgatg
    13801 ctgcatcgtt gcaggcgatg gctgcacagg gtgccctgcc gcaggggctg gcgctgaacc
    13861 agcagaccct gcagcagctg ctgcggggca ataccgcgct tggcacgccc gcgctggaga
    13921 cactgagcct gtccgcacgc gacgcgatca acgtattcgg cagcgtggac ctggacaccc
    13981 gcaatccggc caccggcaac agcagcctgc gcgagctggt gctgggggcg ccggcgatcc
    14041 atggctacgg caaggccggt gaccaggccc gcatctatgc cgacacgctg gtatgggatg
    14101 gcacacaggc ggtgtcgacg gtgctgaccg acggtacccc gcaggcgccg ggcgcggcga
    14161 tggtcgatcg gctcggccat gggcagctcg agctcaacac ccgctcgctg atcctcggcc
    14221 gcgcgcccta tacacgcccc agttcggaag tgccggccaa ccgccaggtg ctcgggttcg
    14281 acggcgtctc gctgcgggcc acgcagcagg tgcagttcgc cggcaagggc acgctggatg
    14341 tctaccaggc ccagggcgcc taccaggccg gcacaggttg gcagtacagc ggcggcgcac
    14401 tggacatcca ggcaccgctg ctgaccggcg cggcgggaag caccctgcag gtacgcagcg
    14461 ggggtgatct gcgcatcagc ggcgccggcc agacccaggg gcacgacgcg ctgggcgccg
    14521 aactggggct gcaggcacgc aatatcctga tcgactctgc cgtggcgctg gcctcgggcc
    14581 gcctgcaggc cagggcggac ggcgacgtgg tgctgggcag caacgcccgc atcgacctgg
    14641 ccgggcgccg catccgcatg gacgatctgg acaagtacag ctggggcggc gacgttgaac
    14701 tcaccgcccg ccagggcaac gtgctggccg ccgctggctc gagcatcgac gtctcggcat
    14761 cgaacaaccg cgcagggcgg atcaccgcca atgcgctggg cgagaacgcg ggccgcatcg
    14821 acctggccgg gaccctgcgt ggtagcgcga gtggtcgcca ggccaccggt ggcagcaccg
    14881 tgccctatga cagcggcgaa ctgctgttgc gcgcgcagca gctttccgac ttcgccggct
    14941 tgaatcgcca gctggatgcg ggcggcttct tcggtacccg cagcttccag ctcaagcagg
    15001 gcgacctgac cgtgaccgac acgctgaagg cgcgcaacgt tgcgctcagc atcgatggcg
    15061 gcagcctgca tgtgctcggc accatcgacg ccagcggaga gcaggtggga agcatccgcc
    15121 tggccgcgcg tgaccgcctg caggtggatg gacggctgga tgcacacggc agcgggctgc
    15181 gggtggacag ctacggcaag atcatcgaca gcagcaaccg tgcgctggtg gagctgggca
    15241 gccgcgacgg cgaggtggtg ctgggcagtg ccgcgcgcgt tgacctgcgc agcggcactg
    15301 cagttgcaca gggcaccgcg cccggccaga acgatggcgt ggcacgaggc accttcaccc
    15361 tcaatgtgcc gcgacggggc actgacgatg cagcagtgcg cgccgagtcc ggtgcgtcgg
    15421 tcaccggcgc gcgggatgtg ctggtcaatg ccttccggcg ctataccgac gcgccgctgg
    15481 cagcgacgcc ggacgtcaat ggccatcggc cgcagctggt cacccagcaa tggctggaca
    15541 cggtggtcga tccgcacaac caggcatgga tgaacgccgc cctcggcaat gccgatctgg
    15601 ccgcgcgcac cgcggcactg ggcaaggtgc ggctgcggcc cggcgtggag atcgtgggcc
    15661 aggtgtcggc cgacaatccc accggcaacc tgaccgtgcg cggcgacctg gacctgtccg
    15721 gctaccgcta tggcccgcag gccaatcgca atgaccccct gcgtcgtgga ttcggcgagt
    15781 cggctgcgct ggtgctgcgc gcagcgggcg atctcagcat ctatggcagc atcaatgatg
    15841 gtttcgcgcc gcccccggcc aaccccgatg agtcgggctg gatgctcgga gagacggccg
    15901 atgccaatac gctgcgcatc acgccgcttg gcggcgacat cgtggtgccc atcgatggcg
    15961 tgacgctgca ggccgcgaca cgtttcccga agggcgcggt gctgaactac gcgatcccgg
    16021 tcacgcagac cgatgtgccc gccggcaccg tgctgccggc ggagatgcgg ctgggcgccc
    16081 gcctgctgct ggcggcgggc acggtgctgc cggcagccgt caccctcgcc gacggcaccg
    16141 tgctggctgc gggcagcctg ctgcagcagc cgttgcagct ggctgccggt gaccggctgg
    16201 gcgccggctt ccggctcgct tcgaaagcaa cgctggcggc gcagctctgg ccggcaggcg
    16261 cggcgttgcc ggaggccatg gaactgtccg gcgcggttgc actggcaccg ggctcgctga
    16321 ttccgtcgat gaccgcggtg aagctgcccg gcggcaagcc ggtcaacctg cggccggccg
    16381 atgccaacgg caggcagggc cgcaactggg cgttggcggc aatgttgccg gaaggcacca
    16441 cgtcgtggga tgtcactgcc gtggccggtg ccgatacctc ggcagccgat ccgcgcctgc
    16501 gccggctgga tgccaagggc gacctgatcc tggccgacag ccactatgga acgatcggca
    16561 ccgtgcagaa gaccagcgag tggatcggcg agcgggtcct caccctggat ggcgcgcttg
    16621 cgctgatcgg cgatccctcc tacgccaatc gaccgttgaa ggaagtggcc gaagaactgg
    16681 gcgtcgacga gcagacgctg tgcgacgcag gcgaaggctt ctgcggcctg gctccgcgcc
    16741 tggtggccaa gcaggcctcg ctggacctgg tgggcgacga gtcggcggtg ggcatgtcgg
    16801 cgaaggaatt cgccgagatc ttcggcatga ccgaagatag cttctgcgcg atcaccgact
    16861 actgctatgg cggcggcgaa ctgatcgaga agacgatcta tggctcgaag ctgggcacgc
    16921 cgctgtggag tgtgctgcgc accggcaagg gcgacctgca gttgctggcc ggccgcgacg
    16981 tgcggatgat gtcgggcttc ggcgtgtaca ccgccggcgc cccgacatcg ctcggcaacg
    17041 ggcgcgatgc agcgttcaat ccgggtcggg cgccggcacc ggggctgtcc accgtgcttg
    17101 ggccgaccga tgcggacggg cgctatgcag ccgccttggg ggaatggcag gcctggtatc
    17161 cggaccacgg cggaaacctg accgtttccg cgggccgcga catccgtggc gacctgtggg
    17221 acagcgccgg ccaggtcgga ttcgatgtca ctccgcgcag ccagactgaa ggcgcgggct
    17281 ttgcccccag cgcggtgggc aactggctgt ggcggcaggg cagcccgggc gtggccgggg
    17341 cgcagcccac ggcgaccagc tggtgggtga acttcggcag ctacaccagc ctgccgacgc
    17401 tgaccggtgc gcgcatggtg ggcttcatgg gcttcggcac actgggtggc ggcaacctca
    17461 ccctcgaggc cggccgtgac gcgggcgtgg ccagcggaac cgtggtcaat tcactggcac
    17521 gccattcgtc cggcgtggtg gcagcggtgg gctcgaccgg gcgcgtcgag gccgacggta
    17581 cgctgcacct gaccggtggc ggcgacctgg cggtgcgcct gggtggcgcg ctgaatccga
    17641 accttgcact ggcaaccagc gatccatcgt tgaaccagcc caacctgccg ctcagtggtg
    17701 cgctggtcaa cctgcgcggg cgcatgcagc tggacgcggc acgcatcggt ggcatggtca
    17761 ccaatgtggc gcactacgtg gcgccgtaca gcggcctgag gcaggaagat ccgttccgcg
    17821 cgcagctggg cgatgccatg ggcgggcctg tgctggtgct gggcgacgcg gtggcgaccc
    17881 tacagtcgcg cggcgacctg gtgctggccg gcgtggccga cgccggccgg gtgccggtgc
    17941 ccagctacaa cgcactggcg ctgggcgatg gccgcaccgc cgcttccagc agctggttct
    18001 cgctgtggac cgccaatacc gcggtggacc tgatctcggc cggtggcgac ctcgcacccg
    18061 gccagcagag gggaaccgtg atggccaccg ccgagtccgg cgaactgttc gccgaggcgg
    18121 tgaagcaacg cggcggtgcc gatcttcgct actggctgta tccctcgcag ctgcggatgc
    18181 tggccgccag cggcagcatc cgccttgcgg aaacttcgac cacgggcggt gatgcgcgcg
    18241 atgtgctgct gaccgcgccc tcggcacgcg gttcgctgga agtgctggcg atggactcga
    18301 tcctggtgcc gatgcgcggt gccgacatca gcagctccgg cgccgatgtg cgcttgccgt
    18361 cgccgttcgc accggccttc accgccgagg tgggagctac ggtgatcggc aacgcttcgg
    18421 tggatggcgt ggcaggcaat ccgcgcgcct cgctgccgct gttcgcgttc ggcccgaatg
    18481 cgccgctggc gcgggaactg cgcgaaggca ccagcgcgcc gaatcgattc tatgcagtgc
    18541 agggtgacat cgtcggcctg aggaccggtg gccagtggac gctggataac gccatgggca
    18601 cgcgcagcct gctcaactgg agcgatcttt ccgccccggt gcaggtgcgc gccggcggcg
    18661 acatcctggt gtccagcatc ggcgcgatga acaccactgc caccgacatc accgtggtgc
    18721 aggccggacg cgatgtggtg cgcagcacgg tacgcgtggc cggaccgggc aacgttgatg
    18781 tcagcgcggg ccgccagctc cgcttcgagg acgcgggcag cgtgaccacc accggcggcc
    18841 tgatccaggg cgacacccgg ccgggtgcca gcgtttcctt gactgccggc gaccagcaca
    18901 tcgccttcga tgcagtgcgc gcccgttacc tgggggctgc caatcttgcc gatcctgcgc
    18961 agccgctggc ggcgcagccg gggaaggtgg ccaagatcta cgacgcggaa ctgaagcagt
    19021 ggctgtcgca gcgattcggc atgagcgtcg acgacggctc cgcgctggcc gccttcgatg
    19081 cgctgccgaa ggagcagcag cacatcttcc tgcgccaggt cttctatgcc gaactgcgcg
    19141 agggaggccg cgagtacaac gatgccgagg ggccgcgctt cggctcctac ctgcgcgggc
    19201 gcgaagccat caccaccctg atgccggaca aggatgcaaa cggtgcgacc ctcgaccgga
    19261 ccggcgacat cgtgatgttc ggtggctccg gcgtgcgtac cgaagccggt ggcaacatcg
    19321 agctgctggc gccgggcggc cagatcgtac tgggcgtggc gggcgaggtt ccgccggcca
    19381 gttccggcct gatcacccag ggtcgcgggg atatccggct gttcagccag gacagtgtgc
    19441 tgctgggact gtcgcgggtg atgaccacct tcggcggtga catcctgggc tggtcggagc
    19501 agggcaacat caacgccggg cgcggctcgc gcaccacgct gctgtatacc ccgccgcgcc
    19561 gcgtctacga ccgctggggc aatgtcgtgc tgtcaccgct ggcgcctgcg accggcgccg
    19621 gctttgccac cctgaatccg attccggaag tgccggccgg cgacgtcgac ctgatcgcgc
    19681 ccctcggcac catcgacgcg ggcgaggcgg gcatccgcgt ctcgggcaac atcaacctgg
    19741 ctgcgcttca ggtactcaac gccgccaaca tccaggtgca gggagagagc aagggcctgc
    19801 cggtactggc cacggtgaac gtcaacgcgc tggcagcagc cagtgcggcg gcaaacagtg
    19861 ccagccaggc cgcacaggat gtgatgcgca agagccagga cgacgcgcgg cgcaaccagc
    19921 cgtcggtgat cagcgtgcag atcctcggct tcggcagtgg caccagcagc atccagccgc
    19981 cggcgcatgg caacaccgcc agcggtggct acgacgacaa cagcgccttc cagttcccgc
    20041 aggccaggcg cgatgaaggc aagcagcgcc gctgagcatc gaacggcgct gcagacggca
    20101 gcatcgggcc agccgccatg gaggggtggc ggccccagcc aggacggcac ggagggcagg
    20161 gagcggccat cagcggtgag gaccaccgac acggcgccgc cgggtgcagg agtgcgcccg
    20221 gcggcaggag ggcagtgggt cgttgcctgc cagtagatcc acgccatgcg tggatgattt
    20281 tcctgcaaag gcgtcctaaa gccccaccac ccgccgatag ctcaacgcac cgcgcccgtc
    20341 gcgcagttcc agccgcagtt ccaggccggt ggccggcaac acctcgcctt cgcccggcaa
    20401 cgacgcccag cccgccccgg gctgccacgc acgcagctcg aagcgctgca cggctcgtgc
    20461 gaccacaatg cccttcgacg gctcgggtgc gggcagcggg tagcggtcgg tggcagcgcc
    20521 gctggcccgc cacaacgtgt ccccctgccg ccaccagcgc acgcgctgcc agcgcagccc
    20581 gtcgctgccc acgctgcggg tgatctccag cgcgaaactc ccgtccgggt ggcgctcact
    20641 gaccagagag ggcggcagca accgctgcgg ctgatcggcc ggacgcaccg cgccgttcat
    20701 cagcgcatca tcggcgcgca tctcgacatc gcgctggaac tgctgaaccg cgcgcaatgc
    20761 acgcgtggtt tccgcatcgg cctggcgcag gcgctggtcg ctgctggcca cgctgtcgat
    20821 ggcccgccag cagatcagtg ccagtacgcc catgacggtg atcgcgatca tcacctcgat
    20881 cagggtgaag ccatgcaccg ggcgcttcac ggcgtggctg tccacggcag ctgcattcgt
    20941 gccagcgact gccgcggcga ctgttcggcc accacgctca gttccagctg cggttgccca
    21001 tccgccccgg tgcccagatg ctgcagcacc aggaaccggc tgcgcccctg caggcagcgc
    21061 tggcgtgcct cctgcggtac ctgtccggcc aggcgcagtt cctgccagcg atcctgcgca
    21121 cacatcaggg ccagccgacg gtcgcgcagt cgcgactgat catcggtggc gaccgcgacc
    21181 gatcgcatca ccgcggccag ggcaatcgac acgatcgcca gtgcgatcag cacttcgatc
    21241 agggtgaatc cgcgcgtgtt ccgtttcact gcacgacctg caactgtccg ctgccatcat
    21301 cacgaagacg cagcaggcga ccgtccagcg acagccgtac ttcccaggca acgccgatcc
    21361 attccgggct cagttcgatg gcggtggccg gctgtaccga aatgccggcg gcctgccact
    21421 tctggggccg cagcaggtcg tcgcgctgta cctccaccca acggctgcct tcgcggcggc
    21481 tgaaatggta accgtcggcg tcggcctgcc agcgcacggt gttgccatcg atgcgggcct
    21541 cgtcgcgcgc gacctgcagg cgttgtgcca gccgctcggc ctcctgccgc aactgccgcg
    21601 cggggtcgag caggctgccc aggcccaggc cgatgccggc cgtgcagatg ccgatgatca
    21661 ccagcaccac catcagttcc agcagggtga aaccacgcgg aatgtgcagc atcgacattg
    21721 cctccggtcc ttgccgatgc ctgccagcgt atgcgcggat gatgaaacaa aagcgtcagc
    21781 ggtagctgct agcgtaggcg gacacgaacg tggcgatggt gcaggacatg gacaggcgct
    21841 gggatcgcaa tcggctgttg accgtgctgg cagcgacgct gctgctggcc gtggtggcct
    21901 actggacggt gaccctgtct gcggtcgcgc cagcggcggt ggccagcgaa gcgcctgccg
    21961 aggccgctgt gcggccggtg ttcgcggcgg cggccagcct gccgctggtg cggctgcttt
    22021 cgcccggcgc cgtccagacc gaagtggtgg tgctgggggt gatggccggc gagcattcgc
    22081 cgctggcctt gctctcggtc gatggccgtc ctgcagaagc gtacgcaccg ggccagcggc
    22141 tgggaccctg cacggtactg gccagcatca gtgccagcac ggtggaactg aaccaggcag
    22201 ggcagtcgcg cagcctgccg gtgccggagc tgccaccggt gccgacggat ggcatcgtgc
    22261 cggccgctgc gcagcgtggc gccccgtagc gccgagccca cgctcggcgg cagatgcacg
    22321 ggttcagcgc gccggacgct gcggcaccac cgaacgacca aaggcatcgc ccatgcgctg
    22381 ccgcgtgcct tccaggttgt actgcatcag ctggttgcca ggctgccgca tcaggcgttc
    22441 ggcttcgggc agcgccggtg acctcgccgg tttcggcgcc ggtgccagct tgcgctgcag
    22501 gcagtcccag gcagggatgc gctcgccgtt gacctgcact tcgatgcatg gcgcggcatc
    22561 gtcctgctgc ttcgcttccc cggcctggag cggtggcacc accagcagca atgccagggc
    22621 gagggcaggg tggaggcccg tcttcaatga actgctcatc tcgaatctcc tgcggcaacc
    22681 ggtgttcttc agcgaagacg tatggcgaag gcagtgtccg cccgcgaggg ttgcggcgct
    22741 gtcaaaagat gacagggctg tcacaaaact gttggcggct ttgacgcgac gtgcacgtcc
    22801 tgttggtaga tccacgcgcc gctccatggc ccttcccttc gatacgacgc gatgccttcg
    22861 atgactcctg ttccgtcccg agccgtccga cttccgctgc gcctgcatcc gttggtgctg
    22921 gcgctggcca tgatgccgct gccgttgttc gcacagcagg cgcccgcgcc cagcgtgaac
    22981 atcaacgaat acatcgtgcg cggcaacacc gtgctcgatc cgcgccagat cgaacgcgca
    23041 gtggagccgt tcctcggccc gggcaagacc ctggccgatg tcgagaaggc gcgtgatgcg
    23101 gtcaatgcgc tgtaccagca ggccggctac cagtcggtct acgttgaact gccggaacag
    23161 caggtcagtg gcggcgtggt actgctgaag gtgcagcaga cgccgatcgg ccagctgcgc
    23221 gtggtcggca ccaggcacga gtcgcccgaa cgcatccgcg agcgcgtgcc ggcgctggcc
    23281 gaaggcaagg tgcccgattt cgagcaggcg cagaaggaac tgaccgcgct caacgaaggc
    23341 gggcgccggc aggtgatgcc acttgtgcgc gaaggccagg tgcccggcac catggacgtg
    23401 gacctgcagg ttgaagagaa gtcgccgtgg cgcgtcagcg cggcactgaa caacgatcgc
    23461 agcgccgata ccgagaagct gcgcctgagc acctcgctgg cctacgacaa cctgtggcag
    23521 cgcgggcaca gcgtcaacgt cggcgtgtac ctggcgccgc aggacaccca gcaggccaag
    23581 gtgttctcgg cgtcgtacat gatgccgttc gaaggcacgc cctggagcct ggaagcttcc
    23641 ggctacaagt ccgacagccg ggtgctgaat gccggcgcgc aggtcggcac cgggtcaggc
    23701 accaacgtga tcggcaatgg ccattcgatc ggcctcaagc tcaactatcg cctggccggc
    23761 agccgccagt ggtggcgcca gctcagcctc ggtgtggact tcaaggacac cgaggaagac
    23821 acgcagatgg aaaagggcag cctgaagacg ccgttgaagt atgcgccgat caccctcgcg
    23881 ttcgtgggcg tgcgccaggg cgagcaggac cagttgagca tcaataccca gctggtggcc
    23941 ggcacccgcc gcctgctggg ctacggcagc gatgccactg cattcgggca gaagcgattc
    24001 tgggccgatc cgagtttcgt ggccttcaag gccgacgtgg ccaacaccca taccttcggc
    24061 agcgactggc agtggtatgc gcgcggctcg ctgcaggtga ccgacgcgcc gctggtgtcg
    24121 gccgaacagt tcgccgccgg cggcatgtac acggtgcgcg gctatctgtc ggccgaagcg
    24181 atcggcgact acggcggcct ggccagcctg gaatggcgca cgccggcgtg gtcgctgtgg
    24241 agcggcaccg acctgcgcgt ctacagcttc gccgacgcag cctacctgcg cctgcgccag
    24301 ccgctgcccg atcagcgtga caagtacaac ctggcctcgg tcggcctggg cgcgcagctg
    24361 cgcctgggcg aacacctgca gctgcgcctg gactatgcct ggccctacgc cgacggcccg
    24421 gtcacgcgca aggacgaccc gcgcctgcat ttcaacatca gcaccagtta ctgacccttc
    24481 ccttgaacat gcgttctccg gagacccttc gcatggaccg tttgctttcc cgagtgttgt
    24541 tgctgctggc cgcgctggtg gcgctgcccg ccgctgcggc cgatgccaat tggtggcagg
    24601 ccgaatggaa gtaccgcaag ccgatcaccg tcgacgccgg cccgcagggc gccggcctgg
    24661 ccggtgaccc gggccgcacg ccgctgctgc tgcgcctgca taccggcaac ttcggcttcg
    24721 atggcaccca ggatgcgggc agcgacctgc gattcgtctc gggcgatggc cgcaccgtgc
    24781 tggcccacca gatcgaacag ttcgatccca agctcggcct ggcgctggtc tgggtggacg
    24841 tgccggcagt cagcgccgcc gcaccgcaga cgatctggat gtactacggc aacgacaagg
    24901 ccccggccag cggcaatggc cagcaggtgt tcgacccgga ctacacgctg gtctaccact
    24961 tcgccgaagc caatgccccg gcccgcgaca ccaccgccta tggcaacaat gccggggccg
    25021 tggtgccgcc gtcggaaggc tcggtgatcg gccgtggcgt gcagctcggc ggcggtccgc
    25081 taccgctgcc ggccagcgcc tctctggcgc agcaggcggg cgcgccattg accgtttccg
    25141 cgtggatcaa gccgggcagc aacagcgccg cacaggcgat ctatgcccgt cgcgacggtg
    25201 cggccgagct ggtgctcggc atcgagaacc gggtgccgtt cgtgcagctc aacggccagc
    25261 gcagcacgcc cgcgcagccg attccggaag ggcagtgggc gcatgtggcg ctgactgcgg
    25321 agaaggggac gctgcagctg tacctcaatg ggcgcgtggt cgcccagctc agtggcgatc
    25381 tgccggccct gaacaccgcc gccgtggtgg gcgccgatgc tgcgggtgcg gcgcagccgc
    25441 tggccaactt cgaaggtgcg ctggatgagc tgcgcatctc gcgggtggcg cgcccggcgg
    25501 cgctgctgct ggccgatgcc accgcgcagg gcgcggattc gcgcctgatc agctacgggg
    25561 ccgacgagca gtcggccggg cagagccact ttggtttcat cctcaaggcg atgccgttcg
    25621 acgcctgggt ggtggtggcc atccttggcc tgatgatgct gctgtcgtgg gcgatcatga
    25681 tcgccaagag ccgccacttt ggccgcacca gcaaggccaa tgccgtgttc accgagagct
    25741 tcggcaagct gtccggcgtg ccgctgcgca ccctgtccga catggaccgc cagggcaagg
    25801 cgccgaccgc gatgcacgag ggttcgctgt ggcgcatcta ccaggtcgcc atcgatgaaa
    25861 tgcagcagcg ccaccagcgt gatggcaaca gcggctacct cagcgcggcc accatcgccg
    25921 ccatccgcgc ctcgatggat gcggtgatgg tgcgcgagca ggaaggcatg gcgcggcgca
    25981 tgaactggct gtccaccacc attgaaggcg cgccctatgt tggcctgttc ggcaccgtga
    26041 tcggcatcat gctggtgttt gttgtggcgg cgatggccgg cgcggtggac atcaactcgg
    26101 tggcaccggg catggccgcc gcgctgctgt gtaccgcagc cggcctcggc gtcgcgatcc
    26161 cggccctgtt cggctacaac tacctgggtg cccgtgcgga agccatcggc gcggacatgg
    26221 cggtgttcat cgacgagttc gccgcgcgcc tggccgaaga gcaggacggg cgcggcccgg
    26281 ccgcggtcca gggctgaggg gcgcgccatg ggccagaagg cgaagttcgg catcaagaag
    26341 cgcgagaagg gcatcaacgt gacgcccttc gtcgacgtgc tgctggtggt gctggtgatc
    26401 ttcatcctga ccagcaacgc ctccatcccc ggcatcgagg tcaacctgcc gaaggccagc
    26461 aacagcgtgg cgctggagaa gccgaaaacc aaggcgatca ccatcgaccc tagcggccag
    26521 gtgttcctcg atgcctaccc ggtgacgatg gccgaactgg aagaccgcct gcgcaccgaa
    26581 cgtgcgacca cgccggactt cccggtgatc gtgcgcggcg atgcgcaggt gcagtacgcg
    26641 cgcgtggtcg aggtgctgga cctgctgcgg cggctggagc tggcccaggt cgggctggtc
    26701 accggcaagg cacagggctg aggcatgacg gcccatcaac cccctcggcc ggagcccggc
    26761 atgcgcggtc gccagctgct ggtgaccgtg gcgctggtgc tggccgcgct gttggtgctc
    26821 ggcatcgcgg tgtggtggc
//
LOCUS       DAOKIP010000035        26576 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.035,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000035 DAOKIP010000000
VERSION     DAOKIP010000035.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 26576)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 26576)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..26576
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.035"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            214..3435
                     /locus_tag="QEL58_001301"
     CDS             214..3435
                     /locus_tag="QEL58_001301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HDS1675793.1"
                     /translation="MLGLVRTALNKPYTFVVMAIFICIVGPLSALRTPTDVFPDIGIP
                     VIAVVWQYTGLSPDAMAGRVISPYERALSTTVNDIEHIESQSLAGMGVVKVFFQPGVD
                     IRTANAQITAISQTIVKQMPAGMTPPLILNYSASTVPVLQMAFSSPTLGESQIRDLAQ
                     NTVRPPLTSIPGLAIPAPYGGRQRQITLDLDPQAMAAKGLSAQDVGNALAAQNQITPV
                     GTAKLGSNEFTVLLNNSPSEIEALNDLPIRTVNGAVVTIGQVAHVRDGSPPQTNIVRV
                     NGGHSVLMAALKNGNASTLTLVSRIRAMLPQIGETLPPSLKISLLGDASTFVRESISS
                     VAREGIIAALLTSVMILVFLGSWRSTVIIAASIPLAVLSAIALLSAAGQTLNVMTLGG
                     LALAVGILVDDATVTIENVNWHLEQGKGVREAILDGAAQIVGPAFVSLLCICIVFVPM
                     FLLDGIAGYLFRPMALAVIFAMASSFVLSRTLVPTMALYLLRPHRVEGGAGHHPEDAF
                     LNHHEGDHPQPRRARMAATLVRWQQRFEAGFSATRDRYHALLGLALAHRGRFLLGFMA
                     CVLVSFALLPTLGQDFFPATEASALSLHVRLPLGTRIEETAAAFDRIEARIRQELPPQ
                     EIDAIVDNLGLPMTGINMAYSATGTIGPQDGDIQVSLKPGHGDAAEYARRLREVLPSA
                     FPGASFAFLPADTSSQILNFGSPAPLDVRIAGPDAAGNRAYAQELQRRLRHVPGLVDL
                     RLQQPDGYPTLKVEVDRLRANGLGITERDVTNSMVASLAGSGQVAPTFWLSPKNGISY
                     SVVAATPQYRMDSLAALQALPVTGSGGGVPQVLGGLAEIQRGSSSAVVTHYNVQPTLD
                     VYASVQGRDLGAVAADVQKVIDGMAGQRPRGTEVGLHGQMDALHVAFSGLGYGLLAAI
                     VLIYLLIVINFQSWTDPFVIITALPAGLAGVVWMLFLTHTTLSVPALTGAILCMGVAT
                     ANSILVVSFCRERLAEHGDAVKAALEGGFTRFRPVCMTALAMILGMLPTALSTEQNAP
                     LGRAVIGGLLLATCATLLFVPVVFALAHSRKTRTAPAGEPLHV"
     gene            3428..4591
                     /locus_tag="QEL58_001302"
     CDS             3428..4591
                     /locus_tag="QEL58_001302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HDS1675794.1"
                     /translation="MSESSLPQHSLRRPLVLAAAVVVILVAGGLALRAQQAHAVVDWT
                     ERQAVPSVQVVTAGARGAAGTMTLPSHLSAWTEAPIHARVGGYLKSWSADIGQPVKAG
                     QVLAVIDSPELDQQIAQAHAHLLQVQADAALAKVSAERWQGMLGSHSVSRQEADEKQA
                     NAVAAQASVEAAQADYARLQELGRYRTLHAPFDGTVTSRQTDVGQLIRADDSGRELFN
                     IADTRRLRLMVPVPQNSAASIRPGLQATLQVPGQEGRHFTATLQGDSSAIDRSSGTLL
                     AQFVVDNADGALLPGSYAEVTLPLQGGGAGVSVPAEVLIFRAKGTQVAVVDSKDIVHL
                     RDIHIASDLGSTLRVDRGLQAGDRVIPNPPDALREGDRVHVVAGGQEPTHARG"
     gene            4578..5978
                     /locus_tag="QEL58_001303"
     CDS             4578..5978
                     /locus_tag="QEL58_001303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux transporter outer membrane subunit"
                     /protein_id="HDS1675795.1"
                     /translation="MPAAERAAVLAAVAVALALAGCSLAPAYQVPAVAVPVAYERAGA
                     TAGSGALPQAWWQAFQDPVLDRLQQQLGAANPSLALAVAHYDAARAAAGGVASARAPQ
                     VGFSTGPVRQRQSDDKPLRSATQPAIYDSNTATFSLSFDLDLWGRLRNAAAAGKARAE
                     ASGDDLAAARLSLSQQLAGLYLQLRGAEAQQAILHDSIEDYRQALALTEDRFRGEIAS
                     QLDVSRAQHQLASAQADLDALDGRHELLRHAIAELVGAPATGFVIADAGLPALPSVPA
                     DLPSRLLQRRPDIAAAERRVFAANAGIGVARAAWFPQLSLSGLLGGQTSGGSALLDAG
                     NRYWALGPLAALPVFDGGRRKAAKAEAYAEFDAASAQYRATVLAAIRQVEDQLTLLRQ
                     LDAQRGHEQDAVTAARRAEQIANDRYSGGAVSYLDVVSAQTDARQAQLGLQDIQSRQL
                     QASAALMAALGGGWSR"
     gene            6056..6298
                     /locus_tag="QEL58_001304"
     CDS             6056..6298
                     /locus_tag="QEL58_001304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008267410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675796.1"
                     /translation="MMAWNRTVVAAYAPAMIGWCLALAAGLRLEQLRGDLHAQALLPL
                     LHGGVVALLVLTLACTLAASAVLWRANRPPPRTAAP"
     gene            complement(6300..6590)
                     /locus_tag="QEL58_001305"
     CDS             complement(6300..6590)
                     /locus_tag="QEL58_001305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012480608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase"
                     /protein_id="HDS1675797.1"
                     /translation="MLKVIAEDFIHPDAVETVLPLYRELVACTQREPLCVSYELFVDQ
                     KDPGHFIFIELWPDRAALDLHCASEHFQRLVPQINAFQRAPCRFVLMEAAAL"
     gene            complement(6653..7741)
                     /locus_tag="QEL58_001306"
     CDS             complement(6653..7741)
                     /locus_tag="QEL58_001306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019336520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675798.1"
                     /translation="MFTRLASFLILGLCSAGALAADAPYRPTFHPDQLKGPPAGRPNE
                     VLVLGSTHLSGLPKTFQPALLEPLLQRLVAWKPELIATEDLSGLQCDFMRRYPARYAE
                     SVSTYCFDTSAAQAATGLDVPTANTEVERLLSNWPDDPTPAQRRRLAALFLAAGERGS
                     AQVQWLRLAAAERKDGDGLSAALVEFLDKGLARRNETNLIAAEVAARLGHERLWAVDD
                     HTADSPTPAEDEAAASAAITGAWKNKHSQARRDADKRLVADLDKPDGVLALYRAYNSP
                     AAAMDAYRSDFGATLVEPSAKAFGRMYVGYWETRNLRMVANMRDVLGLHPGSRMLAIV
                     GASHKGYYEAYLNQMHDVQLVSADAVLR"
     gene            7874..8443
                     /locus_tag="QEL58_001307"
     CDS             7874..8443
                     /locus_tag="QEL58_001307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDS1675799.1"
                     /translation="MKATTTPIPRASDWTIGSPRLSLRPFTTDDAGEAFIAITPGLTR
                     YMAFDPPASEQAFAVVWRTWLLTIADGSDFTFVIRRRTDHTFLGLAGLHRTGDAEPEL
                     GIWIAESMHGQGYGREAVSAVLASASLRLDCAAFRYPVAEQNAPSRRLAESLGGVPVA
                     REQAVKYIAIVYRIPAIASQVETGVAESR"
     gene            8700..10526
                     /locus_tag="QEL58_001308"
     CDS             8700..10526
                     /locus_tag="QEL58_001308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010484946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HDS1675800.1"
                     /translation="MLIPGFTAGAQAPAELHTRWSPWRALLGALAPQQRTRTEPAATH
                     RAELEAQVAALHRVQAVIEFALDGTILQANDNFLQAMGYRLDEIQGKHHSLFVDPELA
                     RSAEYRDFWARLGRGEYDAGQYRRFGKGQREIWIQASYNPVLDQQGRPYKVVKFATDI
                     TAQKLQAADSAGQLAAIGKSQAVIEFSMDGRILSANDNFLATTGYSLDEVRGQHHSLF
                     VEPGHRSSDEYRQFWEKLGRGEYDAGQYRRLGKGGREVWIQASYNPILDLNGKPFKVV
                     KYATDITAQVHENQAMQRAVAQTREVVAAAKQGDLTRRVATADKQGAIAELCDGVNSL
                     VEAMAAIIGQIKFAADTIAVGATEIAQGNSDLSQRTEQQAASLEETAVSMKGLAETVQ
                     RTATNARQASQLAGGAADVAARGGSVVHEVVETMAVINASSRRIVDIIGVIDGIAFQT
                     NILALNAAVEAARAGEHGRGFAVVATEIRELSQRSASAAKEIKQLIDESVANVGAGTA
                     QVESAGRTMDEIVTNVRRVSDLMTEISTASQQQSDDIQQMNHAVDLIDQGTQQNAALV
                     EEASAAARSMEEQSAHLLQTVASFRVQEGTGHAHGVPALRAV"
     gene            complement(10523..11962)
                     /locus_tag="QEL58_001309"
     CDS             complement(10523..11962)
                     /locus_tag="QEL58_001309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HDS1675801.1"
                     /translation="MTLRAALFFVVTHALVIALIGPQDPVGSYLMLITAPLLAALACA
                     RRARDSRAACKWRMLGAAVALFSLALLALLYRNVAGLDPAQMTVSSLILYVFYRIPLT
                     YVAASPGGGSRAIRAVDLAIIALLWLLYYVHTQAMAPLNPALWTQCLKTMSSVQNSLV
                     FCFALIRFIAEDNPDRRDFFRTLTLYALGYFLLALYINTYQPQLPDGSWGDLLISGLF
                     VLLAVMAGSRRRRAAAEISLTLRRIVDAGVPLMLPLLLMMVALLVARLQPTLATVGFL
                     GALLGYALRSVLSQVEIQRQRDELETLARRDALTGLGNRRSFDESLGAAHRRARRQGL
                     GLAVLMIDIDHFKRLNDTYGHPEGDRRLRAVAAILDGCLQRGDDLLARYGGEEFIAAL
                     PSAEAMHALELGERLRAAVESAALPAADGQVTISVGVAWQAAGDEREPSDLVAHADQA
                     LYRAKRDGRNCVHLAPAPGTAEAPSGQRA"
     gene            complement(12075..12620)
                     /locus_tag="QEL58_001310"
     CDS             complement(12075..12620)
                     /locus_tag="QEL58_001310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012511412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDS1675802.1"
                     /translation="MPASNVPSLPDTLPARLRPLRTDDAAAWSRYLSLPGVIEHTSWG
                     DISEHALRQQVARYMPGGPDQRWALADAEDGLIGTIGLNGIDLLHGRAELAYDLDPHW
                     QGQGLATHAARAVLDWGHAVRRLVRIQATVLDSNARSIAVLERLGMQREGLLHAYRRV
                     RGQPRNFWMFAHLEGTATPPR"
     gene            complement(12691..12776)
                     /locus_tag="QEL58_001311"
     tRNA            complement(12691..12776)
                     /locus_tag="QEL58_001311"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(12741..12743),aa:Leu,seq:caa)
     gene            12909..13289
                     /locus_tag="QEL58_001312"
     CDS             12909..13289
                     /locus_tag="QEL58_001312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006373810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HDS1675803.1"
                     /translation="MTVLQDLRVLVVENDEMSAALLQMQLVHAGATVVGLAASVDEAL
                     RLLEDSAPDVALLDYRLARNETSEPVAAALSARGVPFVLATGMLAEQLPASMLAGVLL
                     VKPYLSVDLSQALVRAVGHSRIKA"
     gene            13359..13556
                     /locus_tag="QEL58_001313"
     CDS             13359..13556
                     /locus_tag="QEL58_001313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010484956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675804.1"
                     /translation="MKKWIKRMVAAGVLSMAVFGGTATAAWCGQPCFQLYKSCIARGG
                     EVEQCLQEQAFCEEAMCGGNP"
     gene            complement(13602..14558)
                     /locus_tag="QEL58_001314"
     CDS             complement(13602..14558)
                     /locus_tag="QEL58_001314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005417123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SOS response-associated peptidase family
                     protein"
                     /protein_id="HDS1675805.1"
                     /translation="MCYSALIRADYAKLVREFGAILSLEEFAELYAHDPGKKRPKTPK
                     AMDDGFAGARTEQGRDIVAKIQQWHAQEQQALEAELVRQRERRDIAHATLATRPTQKA
                     RNDLRVAGHRIERAQARLEDLHRVQLLPRDNRIFPGTYAPVMVSDNGQRVIKPMRYQC
                     RLPDTPARNDVLYPGTYNARRDSLEGYWRGAFGLRHGVVVVQAFYEHVPRHAIDARTL
                     GADEKEQDVVLEFRPDPPRDLLLACLWAEWEGPEGRLLSFATITDAPPPDVAAAGHDR
                     GVVPIRREHLDAWLNPDPDDLALQYRILDDREDIRYVYDEAG"
     gene            14636..15052
                     /locus_tag="QEL58_001315"
     CDS             14636..15052
                     /locus_tag="QEL58_001315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDS1675806.1"
                     /translation="MNESATCQFREAVPTVEDYCRLRVLAGLSAKHQEAAARALPNTL
                     FGVCAYQGNELVAMGRIVGDGGCHLQVCDIAVLPRLQGQGLGKEVMRRLDDWMRASLP
                     PSAYVSLLADGEAHRLYAQFGFAPTAPASIGMYRRF"
     gene            complement(15113..15188)
                     /locus_tag="QEL58_001316"
     tRNA            complement(15113..15188)
                     /locus_tag="QEL58_001316"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(15152..15154),aa:Glu,seq:ttc)
     gene            complement(15237..15312)
                     /locus_tag="QEL58_001317"
     tRNA            complement(15237..15312)
                     /locus_tag="QEL58_001317"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(15277..15279),aa:Ala,seq:ggc)
     gene            complement(15358..15433)
                     /locus_tag="QEL58_001318"
     tRNA            complement(15358..15433)
                     /locus_tag="QEL58_001318"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(15397..15399),aa:Glu,seq:ttc)
     gene            complement(15482..15557)
                     /locus_tag="QEL58_001319"
     tRNA            complement(15482..15557)
                     /locus_tag="QEL58_001319"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(15522..15524),aa:Ala,seq:ggc)
     gene            complement(15742..15817)
                     /locus_tag="QEL58_001320"
     tRNA            complement(15742..15817)
                     /locus_tag="QEL58_001320"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(15781..15783),aa:Glu,seq:ttc)
     gene            complement(15872..15947)
                     /locus_tag="QEL58_001321"
     tRNA            complement(15872..15947)
                     /locus_tag="QEL58_001321"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(15912..15914),aa:Ala,seq:ggc)
     gene            complement(16050..16448)
                     /locus_tag="QEL58_001322"
     CDS             complement(16050..16448)
                     /locus_tag="QEL58_001322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal-responsive transcriptional
                     regulator"
                     /protein_id="HDS1675807.1"
                     /translation="MNIGQLARQAGVPIDTVRYYERQQLLPTAARSAGGYRIFGEPDL
                     RRLRFIRRAKALGFSLDEIGELLALSDRHSQDMGSVRDTAQARLQDIAQRMAELQRMH
                     TALSQLVDACPGHGALDQCPILAALTGDNA"
     gene            16635..17702
                     /locus_tag="QEL58_001323"
     CDS             16635..17702
                     /locus_tag="QEL58_001323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDS1675808.1"
                     /translation="MDGIRNEGFVEVAVVEYPGGDPSAASVLAEMAHVANRLAQQQRR
                     PFKRVLVTRWIVPASQTGVHRIAGAEMLDAAIPAVIAVPGQISPGTCLRAEEVVLDWL
                     RAHYDGGSLLAAASEGVSVLARAGLLAGRTVSGPDLGRHPGLQAQAVSWVPSERALVD
                     DGDLLTVGGSQAWRFLGLRLLYRLHGQGVASAVAQQLGITVPDAVQQDLERFSANFAH
                     GDRDVLKAQRWLHTTAARGATLAAICEVSGLEPRTLQRRFLRATGLRPIEYCQRLRIA
                     KAQTLLQQGAGIDEVAWGVGYADQSAFRRLFLRIVGMTPANYRRHVSCKRRERPLMPS
                     VAGSLRGLQAPTGAQLGRSAA"
     gene            17785..18588
                     /locus_tag="QEL58_001324"
     CDS             17785..18588
                     /locus_tag="QEL58_001324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012480601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA family protein disulfide reductase"
                     /protein_id="HDS1675809.1"
                     /translation="MSSVGPVPMPVVLILVCAALAMAVARLWPRGNAPEPLPSAASMV
                     LDMLLIGLLCGRISFVALNFALYGGAPWSILQITDGGYHLVVVVLAGLAWGLWRLRRW
                     PVLRAPVLTAALVGVLLWFGGSQVLSLWQERQMPLPTLQVTDLQGGPVDLQQFRGSPL
                     VLNLWATWCGPCRREMPVLAAAQHAHADVQFVFLNQGETLDEVQGFLADERLVLGNVL
                     LDDDAAASTVLGVQAYPSTLFFDADGRLRELHLGELTAAGLEHKLRRLR"
     gene            18619..19458
                     /gene="dsbG"
                     /locus_tag="QEL58_001325"
     CDS             18619..19458
                     /gene="dsbG"
                     /locus_tag="QEL58_001325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010484982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbG"
                     /protein_id="HDS1675810.1"
                     /translation="MLSTSLRTAPALLLLPVMLALAACSQAQTPPGKTAAAPAASAPA
                     AAKGDRPAVLKGIEKHGFEVVAEFDAPGGLRGFAGVVGGQEPAAAYVTADGKHVLVGS
                     LFDAEGNDVAAEAVEKLVAAPMSAKMWTKLEASAWVRDGKADAPRVVYTFSDANCPYC
                     HKFWEAARPWVDAGKVQLRHIMVGVIREDSPAKAAAILSARDPSAALLENEHQFDRGG
                     IKALPSISREIAGKLDANQVLMIEMGFQGTPGILFQDAQGQVQRRAGLPQGDDLQTVL
                     GPR"
     gene            19974..21419
                     /locus_tag="QEL58_001326"
     CDS             19974..21419
                     /locus_tag="QEL58_001326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin"
                     /protein_id="HDS1675811.1"
                     /translation="MRVAVLSLACLGALAITPAYAQQHDAEDTQALRREIAAMRQVLE
                     GMQQRLDRLEQRDATPAPALAQMPAAPVAPGAATAATADAIHRTQVPGVAQPVLPQRD
                     SVADPSTAASRPDSAAGPTDPDLKGFFAIPGTDTVIRIGGYAKLDAIADSRAAGDEDQ
                     FIPSSMPVGGSHRDVSNFNIHAKQTRFSFEARRPTTHGNLRFYLENDFFGSSDGYEFR
                     LRHAYGQLGNTYAGYGYSSFMDPDSLPDTLDFAGPGGAGYLLVAGIHHSFAMGKGNTL
                     TVAAEDPKTELAGATEERAAVNRLPDVTVTARMERDWGHLQLGAVARSLAYDGDGERD
                     RRMAGGLQLSGSASVGERDLLLFGALGGRGLSRYTADLTGSGLDAVVGADGRLDALDL
                     HGGFVGYTHYWSELWRSNLIFGQLTLERNAALAADAFRQSRYGVFNLIWSPAPSWTMG
                     MELLYGRLEQQGGTRGDTVRVQGSLQYSFIK"
     gene            21496..22848
                     /gene="adiC"
                     /locus_tag="QEL58_001327"
     CDS             21496..22848
                     /gene="adiC"
                     /locus_tag="QEL58_001327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine/agmatine antiporter"
                     /protein_id="HDS1675812.1"
                     /translation="MAEAKKIGVVGATFLVAGNMMGSGVFLLPSSLAKIGTASIWGWL
                     ITTAGALLLAFVFAKLGKLAPKAGGPYAYARDWFGPYMGFQTNTIYWFANWIGNVAIP
                     IAAVGYFSYFFPILSEPLVRCIAVLVLVWALSFANMIGPAFVSRVQTVTTSFALVPIL
                     GIAIFGWFFFDADIFKGAYNVSGESNFGAISSAAALTLWAFIGVESASVTAGVVENPE
                     KNVARATLAGVFLAAIAYIASSSVIMGMVPNGELQTSDAPFALAAAKAVGGWGGALVS
                     LCAFIGAAGSLGGWILLTAQSAKAASDDGLFPSIFSKTNKDDVPVKGVLIVAVLMTLA
                     VLVTSTSETASAQFDVITSAAVVLTLLPYIYSCVACYFVVERSHTLVHTGAFWTLTSL
                     TVVYCLWAIYGSSGTIVQYAFLFVLFITVFYPFFSEERRQQRQRAREASAISAGAQRS
                     "
     gene            22869..25157
                     /locus_tag="QEL58_001328"
     CDS             22869..25157
                     /locus_tag="QEL58_001328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008268240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine decarboxylase"
                     /protein_id="HDS1675813.1"
                     /translation="MYFKSLDYPVIVIDNDYESPRIGGILIRALVEELRSNDQRVLCG
                     LNLDDARAGARTYVAASAVLISIDGSEEVDGEFQRLTAFLREQSARRANLPVFLYGER
                     RTIEKVPSKLLKYIHGFIFLFEDTKSFISRQVMRAAEDYMKNLLPPFFKALIHHAAES
                     NYSWHTPGHAGGVAFTKSPVGRAFHQFYGENTLRSDLSISVPELGSLLDHTGPIKDAE
                     NEAARNFGADHTFFVTNGTSTANKIVWHGTVARGDVVFVDRNCHKSLLHALIMTGAVP
                     VYFTPSRNAHGIIGPISLDQFTPESLQQRIAANPLASKAYQAGSKPRIAVVTNSTYDG
                     LCYNAEKIADEIGSAVDFLHFDEAWYAYAAFHPFYENHYGMAKGKPREQDAIIFTTHS
                     THKLLAAFSQASMIHVRNSAHRNLDAERFNESFMMHTSTSPHYGVIAACDVASKMMEG
                     DAGRSLVQEMHDEAIAFRRAMLHVRDDLGRDDWWFSVWQPTKVERSLDKGDTPAPLVA
                     KREEWYLQPDAHWHGFENLVDDYVLIDPIKVTLLTPGLAMDGSMGKLGIPAAVLSKFL
                     WGRGITVEKTNLYSVLFLFSMGITKGKWSTLVTELMAFKELYDRNAPLSQALPSLAAD
                     YPNAYAGWGLRDLCDALHAFNQEFSVAKVMREMYVDLPTPVMTPADAYNHLVKGEIER
                     VDIEQLSGRVAATMLVPYPPGIPTIMPGERFGDSDEPIIQSLRIAREQNARFPGFESD
                     VHGLIIEHDGDEASYRVEVLKA"
     gene            25186..26088
                     /locus_tag="QEL58_001329"
     CDS             25186..26088
                     /locus_tag="QEL58_001329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010484991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation diffusion facilitator family transporter"
                     /protein_id="HDS1675814.1"
                     /translation="MDTAREQRILKFSIGVTIAVSAVGFIGGLLVGSQAILFDGVYSL
                     VDVALTLVSLSVLRLVAREQSPRFQYGYWHLEPMVEALGGVILSLACVYALANAVIGL
                     TTGGHEVKFGPALWWAALLSASNLAMAAFVAQRARRLRSALLWLDVRGWLLGGLMSLA
                     VVLAFVLALVLHGGQWHHWVPYLDSIVLALISLAVLPVPARSAWKAMREVLQVAPDDL
                     DRRVQQVMQAFVAERGYAGFTSHVAKMGRMRFIEIHVLADPATPLGSVGQVDAMRDEI
                     AVRLDARGSTFWLTIDFTADPAWT"
     gene            complement(26247..>26576)
                     /locus_tag="QEL58_001330"
     CDS             complement(26247..>26576)
                     /locus_tag="QEL58_001330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012511404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HDS1675815.1"
                     /translation="PPAPDAPPADFQAGAASDQWEARLMARLERYRYYPAAARSRRQQ
                     GTAWVRASIDREGRLLALRLEQSSGQPMLDDAALQTFRRAQPLPPIPAELKAPQELVV
                     PVEYYLR"
BASE COUNT         4308 a         8586 c         9094 g         4588 t
ORIGIN      
        1 catcgcccca ccaaaccgcg gaaagcacgc tgttgctgtt gctttggctg ttgctgttgc
       61 cgttgcttct gcgggtgcag ggcgcagccc tgccgaaccc actcccttca tgaaatatgt
      121 ttcatctgcg gcacagcctt gttttagccg gtagcgccga tacttgccgg cctgcgctgc
      181 ccgcggtggg cagtggcatc gctggagagc cgcatgctcg ggttggtcag gaccgcgctc
      241 aacaagcctt acaccttcgt ggtaatggcc attttcatct gcatcgtcgg tccgctcagc
      301 gcgctgcgca cccccaccga tgtattcccc gatatcggca tccccgtcat cgccgtggtc
      361 tggcagtaca ccggcctgtc gccggatgcg atggccgggc gcgtgatttc cccctatgag
      421 cgtgcgctca gcaccaccgt caacgacatc gagcacatcg aatcgcagtc gctggcgggc
      481 atgggcgtgg tcaaggtgtt cttccagccc ggcgtggaca tccgcaccgc caatgcgcag
      541 atcaccgcca tctcgcagac catcgtcaag cagatgccgg ccggcatgac cccgccgctg
      601 atcctcaact acagcgcctc caccgtgccg gtgctgcaga tggcgttctc cagcccgacc
      661 ctgggtgaat cgcagatccg tgacctggcg cagaacaccg tgcgcccgcc gctgacctcg
      721 atccctggcc tggccattcc cgcgccctac ggtggcaggc agcgccagat caccctcgac
      781 ctggacccgc aggcaatggc ggccaagggc ctgtccgcgc aggacgtggg caacgcactg
      841 gccgcgcaga accagatcac cccggtcggc accgccaagc tgggcagcaa cgaattcacc
      901 gtgctgctca acaacagccc cagcgagatc gaggcgctca atgacctgcc gatccgcacc
      961 gtcaacggtg cggtggtcac catcggccag gtcgcccatg tgcgcgatgg ctcgccgccg
     1021 cagaccaaca tcgtgcgggt caacggcggc cactcagtgc tgatggcggc gctgaagaat
     1081 ggcaacgcct cgaccctgac cctggtcagc cgtatccgcg ccatgctgcc gcagatcggc
     1141 gaaaccctac cgccgtcgct gaagatctcg ttgctcggcg atgcgtccac cttcgtgcgc
     1201 gaatcgatca gcagcgtcgc ccgcgagggc atcatcgccg cgctgctgac cagcgtgatg
     1261 atcctggtgt tcctcggcag ctggcgctcg accgtgatca tcgccgcctc gattccgttg
     1321 gcggtgctgt cggccatcgc gctgctgtcc gccgccgggc agacgctcaa tgtgatgacc
     1381 ctgggtggcc tggcactggc cgtgggcatc ctggtcgacg atgccacggt caccatcgag
     1441 aacgtcaact ggcacctgga gcagggcaag ggcgtacgcg aggcgatcct tgatggcgct
     1501 gcgcagatcg tcggcccggc attcgtgtcg ctgctgtgca tctgcatcgt gttcgtgccg
     1561 atgttcctgc tcgacggcat cgccggttat ctgttccggc cgatggcgct ggcggtgatc
     1621 ttcgccatgg ccagctcgtt cgtgttgtcg cgcacgctgg tgccgaccat ggcgttgtac
     1681 ctgttgcgtc cgcaccgggt ggagggcggg gcaggccatc atcccgagga tgcgttcctc
     1741 aaccatcatg aaggcgatca tccgcaaccg cgtcgcgcac ggatggcggc cacgctggtg
     1801 cgctggcagc agcgcttcga agccggattc tccgccaccc gcgaccgcta ccacgcgctg
     1861 ctgggcctgg cactggcgca ccggggccgc ttcctgctgg gtttcatggc ctgcgtactg
     1921 gtgtccttcg cgctgctgcc aaccctgggc caggacttct tcccggccac cgaagccagc
     1981 gcgttgtcgc tgcatgtgcg cctgcccctg ggcacgcgca tcgaggaaac cgctgcagcg
     2041 ttcgaccgca tcgaagcgcg catccgccag gaactgccgc cgcaggagat cgatgccatc
     2101 gtcgacaacc tcggcctgcc gatgaccggc atcaacatgg cctacagcgc taccggcacc
     2161 atcggtccgc aggatggtga catccaggtc tcgctgaaac cgggtcacgg cgatgccgcc
     2221 gaatacgcgc gacgcctgcg cgaggtactg ccttcggcct tcccgggcgc cagctttgcg
     2281 ttcctgcccg ccgataccag cagccagatc ctcaacttcg gttcgccggc accgctggac
     2341 gtgcgcatcg ccggaccgga tgcggccggc aaccgcgcct atgcgcagga actgcagcgc
     2401 cgcctgcgcc acgtgccggg cctggtcgac ctgcgcctgc agcagcccga tggctacccg
     2461 accctgaagg tggaggtcga tcggcttcgc gccaatgggc tgggcatcac cgagcgcgat
     2521 gtcaccaaca gcatggtggc gtcgctggcc ggtagcggcc aggtcgcccc gacattctgg
     2581 ttgagcccga agaacggcat ctcctacagc gtggtcgccg ccacgccgca gtaccgcatg
     2641 gacagcctgg ccgcacttca ggcgctgccg gtcaccggta gcggtggcgg cgtgccacag
     2701 gtgctcggtg gcctggccga gatccagcgc ggctccagtt cggcggtcgt cacccactac
     2761 aacgtgcaac ctacgctgga cgtgtatgcc agcgtgcagg gccgcgacct gggtgccgtg
     2821 gccgccgacg tgcagaaggt catcgatggc atggcgggcc agcggccgcg cggcaccgag
     2881 gttggcctgc atggccagat ggatgcgttg cacgtggcct tcagcggcct gggctacggc
     2941 ctgctggctg cgatcgtgct gatctacctg ctgatcgtca tcaacttcca gtcctggacc
     3001 gatccgttcg tgatcatcac cgcgctgccg gcgggcctgg caggcgtggt ctggatgctg
     3061 ttcctgaccc acaccacgtt gtccgtgccg gcattgaccg gtgccatcct gtgcatgggc
     3121 gtggccacgg ccaactcgat cctggtggtc agtttctgcc gcgagcgcct ggccgagcac
     3181 ggcgacgcgg tcaaggccgc actggaaggt ggtttcaccc gcttccgccc ggtctgcatg
     3241 accgcgctgg cgatgatcct gggcatgctg ccgactgcac tgtccactga acagaatgca
     3301 ccgctgggcc gcgcggtgat cggcggcctg ctgctggcca cctgcgccac gctgctgttc
     3361 gtgccggtgg tgttcgcatt ggcccactcc cgtaaaaccc gtactgctcc tgccggagaa
     3421 cccctgcatg tctgagtctt cgctgccgca gcattcgctg cgccgtcctc tggtcctggc
     3481 cgccgccgtg gtggtcatcc tcgttgccgg tggcctggcc ctgcgcgcgc agcaggcaca
     3541 cgccgtggtc gattggaccg agcgccaggc ggtgccgtcg gtgcaggtgg tcaccgcagg
     3601 ggcgcggggt gctgcgggca cgatgacgct gccgtcgcac ctgagtgcct ggaccgaagc
     3661 accgatccac gcgcgtgtgg gtggctacct gaagtcgtgg agcgctgaca tcggccagcc
     3721 ggtgaaggcg gggcaggtgc tggcggtgat cgacagcccg gagctggacc agcagatcgc
     3781 gcaggcgcat gcccatctgc tgcaggtgca ggccgatgcg gcgctggcca aggtcagcgc
     3841 cgagcgctgg cagggcatgc tcggcagcca ttcggtatcg cgccaggaag ccgacgagaa
     3901 gcaggccaat gcggtggccg cacaggccag cgtggaagcg gcgcaggccg actacgcgcg
     3961 gctgcaggaa ctcggtcgtt accgcacctt gcatgcgccg ttcgatggca cggtcacctc
     4021 gcggcagacc gatgtcggcc agttgatccg cgccgatgac agcgggcgcg agttgttcaa
     4081 catcgccgat acccgacgcc tgcgcctgat ggtgccggta ccgcagaaca gcgcggccag
     4141 catccgtccc gggctgcagg caaccttgca ggtaccgggc caggagggac gccacttcac
     4201 cgccaccctg cagggagact ccagcgcgat cgaccgcagt tccggcaccc tgctggcaca
     4261 gttcgtggtc gacaatgccg atggcgcact gctgcccggc agctacgcgg aagtgacgct
     4321 gccactgcag ggcgggggag ctggcgtgag cgtgccagcg gaggtgttga tcttccgggc
     4381 caagggcacc caggtggcag tggtcgacag caaggacatc gtgcacctgc gcgacatcca
     4441 tatcgccagt gacctgggca gcacgctgcg cgtcgaccga ggcctgcagg ccggggacag
     4501 ggtcattccc aatccgcctg atgcactgcg cgaaggtgac cgggtgcatg tggtggccgg
     4561 cggacaggag cccacgcatg cccgcggctg agcgcgctgc cgtactggcg gcggtggcgg
     4621 tggcgctggc attggctggc tgctcgctgg cgcccgccta ccaggtgcca gcggtggcag
     4681 tgccggtggc ctatgaacgt gcaggggcca ctgccggatc aggggcgctg ccacaggcgt
     4741 ggtggcaggc cttccaggac ccggtgctgg accggctgca acagcagttg ggcgcggcca
     4801 acccgagcct ggcgttggcc gtggcgcact acgatgcggc acgcgccgca gcgggtggag
     4861 tggcatcggc gcgggcgccc caggtcggct tcagtaccgg cccggtgcgc cagcggcagt
     4921 ccgatgacaa gccgctgcgt agcgccaccc agccagccat ctatgacagc aataccgcca
     4981 cgttctcgct gtcgttcgac cttgacctgt ggggccgcct gcgcaatgcg gctgccgcgg
     5041 gcaaggcgcg cgccgaggcc agtggcgatg acctcgccgc tgcgcggctg agcctgtcgc
     5101 agcagttggc cgggctctat ctgcagcttc gcggcgccga ggcgcagcag gcgatcctgc
     5161 atgacagcat cgaggactac cggcaggcgt tggcgctgac cgaagaccgt ttccgtggcg
     5221 agatcgcttc gcaactggat gtatcgcgcg cgcagcacca actggccagc gcgcaggccg
     5281 atctggatgc gctcgacggc cgccatgaac tgctgcggca tgccatcgcc gaactggttg
     5341 gcgcgccggc caccggcttc gtcatcgccg acgcgggtct gccggccctg ccatcggtgc
     5401 cagccgatct gcccagccgc ctgctgcagc gacggccgga tatcgctgcg gccgagcgcc
     5461 gggtgttcgc tgccaatgcg ggcatcggcg tggcgcgcgc cgcgtggttt ccgcagctga
     5521 gtctcagcgg cctgctgggc ggccagacct cgggtggcag tgccctgctc gacgcgggta
     5581 accgctactg ggcgctgggt ccacttgcgg cgctgccggt gttcgacggc ggccgtcgca
     5641 aggcggccaa ggccgaggcc tatgccgagt tcgacgcggc ctcggcacag taccgggcca
     5701 ccgtgctagc cgcgatccgc caggtggaag accagctgac cctgctgcgc cagctcgatg
     5761 cgcagcgcgg ccacgagcag gatgcggtga ccgccgcacg gcgtgccgag cagatcgcca
     5821 atgaccgtta ctccggtggt gcggtgagct acctggacgt ggtcagcgcg cagaccgatg
     5881 cccgccaggc gcagttgggg ctgcaggaca tccagagccg gcagctgcag gccagcgcgg
     5941 cgttgatggc ggcgctgggc ggaggctggt cgcgatagcc gctggaggcg gtctcagcct
     6001 gtgagagggc ggggcggaac aatcgcccca tccaccccgg acaggagagt gcacgatgat
     6061 ggcctggaat cgaactgtcg ttgccgccta cgcaccggcg atgattggct ggtgcctggc
     6121 gctggccgcc ggcttgcgcc tggaacaact gcgaggcgac ctgcatgcgc aggcgttgct
     6181 accgctgctg cacggcggcg ttgtggcgtt gctggtgctg acactggcct gcacgctggc
     6241 cgcaagcgcg gtgctgtggc gggccaatcg gccaccaccg cgaaccgccg ccccgtgatc
     6301 tacagcgcag cggcttccat cagcacgaac cggcagggcg cacgctggaa ggcgttgatc
     6361 tgtggcacca ggcgctggaa gtgttcgctg gcgcagtgga ggtcaagcgc ggcgcggtcc
     6421 ggccagagct cgatgaagat gaagtgcccg ggatccttct ggtcaacgaa cagttcatag
     6481 ctgacgcaca gcggctcgcg ctgcgtgcac gcgaccagct cccggtaaag cggaagcacg
     6541 gtttccacgg catcgggatg gatgaaatcc tcggcgatca ccttgagcat gtcggtacct
     6601 gcaacgcggg ccctgcagga tagtgccggc gcagggccgg caccatccac cgtcagcgca
     6661 atactgcgtc cgcactgacc agctgcacat cgtgcatctg gttgaggtaa gcctcgtagt
     6721 agcccttgtg cgaggcaccg acgatggcca gcatgcggct gccggggtgc aggcccagca
     6781 cgtcgcgcat gttggcgacc atgcgcaggt tgcgggtttc ccaatagccg acatacatcc
     6841 tgccgaacgc cttggctgag ggctcgacga gtgtcgcgcc gaagtcgctc cggtacgcgt
     6901 ccatcgccgc tgcggggctg ttgtaggccc tgtacagcgc cagcacgccg tcgggcttgt
     6961 ccaggtcggc caccaggcgc ttgtcggcgt cccgccgcgc ctgcgagtgc ttgttcttcc
     7021 aggcgccggt gatggcggcg ctggccgccg cttcgtcctc ggcaggtgtg ggcgaatcgg
     7081 cggtgtggtc gtccacggcc cagagacgct catggccgag gcgcgcagcg acttcggcag
     7141 cgatcagatt cgtttcattg cggcgagcca ggcctttgtc gaggaactcg accagggccg
     7201 cgctcagccc gtcgccgtcc ttgcgttcgg cggcagccag gcgcagccac tgcacctggg
     7261 ccgatccccg ttcgcccgcc gccaggaaca gcgcggccag ccgacgacgc tgggcaggcg
     7321 tcggatcatc tggccagttc gagagcaggc gctcgacctc ggtgttcgca gtgggcacgt
     7381 ccagcccggt cgcggcctgt gcggccgaag tgtcgaagca gtaggtggac acgctttccg
     7441 cgtagcgggc ggggtagcgg cgcatgaaat cacactgcag gccggacaga tcctcggtgg
     7501 cgatcagctc gggtttccag gcgaccagcc gctgcagcaa cggctcgagc agtgccggct
     7561 ggaaggtctt gggcagcccg gacaagtgcg tgctgcccag taccagcact tcgttcgggc
     7621 gcccggcggg cggccccttc aactggtcgg gatggaaggt cgggcgatag ggggcatcgg
     7681 cggccagggc gccggcgctg cacaggccca ggatcaggaa gctggccaag cgtgtgaaca
     7741 tgcgatctcc gtgtcaatga acgtcctgca gtccgctgca tgctggccat tttcatctgc
     7801 ctcggaatct cccgttggtc atgcaaacct tttcggcttg aactgcatcg gcgttcgggc
     7861 gaggctgtgc tcaatgaagg caacgacgac ccctatcccg cgtgccagcg actggaccat
     7921 cggcagcccg cggctgagcc ttaggccctt cacaacggat gacgcaggcg aggcgttcat
     7981 cgcgatcacg ccggggctga cccgctacat ggcgttcgat ccgcctgcat cggagcaggc
     8041 attcgccgtg gtctggcgca cgtggttgct caccatcgct gatggttcgg acttcacatt
     8101 cgtcatccgc cgccgcacgg accacacctt ccttggcttg gcaggcctgc atcgcaccgg
     8161 tgatgcggaa cccgagctgg gcatctggat tgctgaatcg atgcatgggc agggctatgg
     8221 ccgcgaagcc gtgtcggcgg tgctggcgtc cgcgtccctg cggctggact gcgccgcatt
     8281 ccgttacccg gtagccgagc agaacgcgcc cagccggcgc ctggcggaat ccctcggcgg
     8341 tgtccccgtc gcgcgtgagc aagctgtgaa gtacatcgcg attgtctacc gcatcccagc
     8401 aatagcgtcg caagttgaga caggcgtcgc ggaatcccgc taaagccgcc cgccccatcg
     8461 ccgatatccc ctctggatcc cgctccagtc acccgctgca ggaccccagg ctgcccccga
     8521 tgggcggtcc gcgctgtgtg ttccgccgct cccagatgcc gatcgcaccc gcaccagatg
     8581 ttcttgccag ccgctcgagg ggtgcccacc cggtacctgt agtcccaagc aactgaagtt
     8641 gccgccgggc atcccgcccg tcgggtcgca accgcttacc ggacaccgag gatcagacaa
     8701 tgctcattcc aggcttcacg gcgggcgcgc aggcgccggc cgagctgcat acccgttggt
     8761 cgccgtggcg tgcgctgctg ggcgcgctgg ccccgcagca gcgcacccgc accgagccgg
     8821 cggcgaccca ccgcgccgag ctcgaagccc aggttgcggc gttgcaccgc gtgcaggcgg
     8881 tcatcgagtt cgcactcgac ggcaccatcc tgcaggccaa tgacaacttc ctgcaggcga
     8941 tgggctaccg gctggatgag atccagggca agcaccattc gctgttcgtc gatcccgaac
     9001 tggcacgcag cgcggaatac cgtgatttct gggcgaggct cgggcgcggc gagtacgatg
     9061 ccgggcagta ccgtcgcttc ggcaagggcc agcgcgagat ctggatccag gcgtcgtaca
     9121 acccggtgct tgaccagcag gggcggccgt acaaggtggt caagttcgcc accgacatca
     9181 cggcgcagaa gctgcaggcg gccgattccg cggggcagct ggcggcgatt ggaaagtcgc
     9241 aggcggtgat cgagttcagc atggatggcc gcatcctctc ggccaacgac aacttcctcg
     9301 ccaccaccgg ctacagcctt gatgaggtgc gtggccagca tcattcgctg ttcgtcgagc
     9361 cggggcatcg cagcagcgat gaataccggc agttctggga aaagctcggg cgcggcgaat
     9421 acgatgccgg gcagtaccgt cgcctcggca agggcgggcg cgaagtctgg atccaggcct
     9481 cctacaatcc catcctcgac ctcaacggca agccgttcaa ggtcgtcaag tacgccaccg
     9541 acatcaccgc gcaggtgcat gagaaccagg cgatgcagcg tgcggttgcg cagacccgcg
     9601 aggtggtggc cgcagccaag cagggcgatc tgacccggcg cgtggccacg gccgacaagc
     9661 agggcgcgat cgccgaactg tgcgacggcg tcaactcgct ggtcgaggcg atggccgcga
     9721 tcatcggcca gatcaagttc gccgccgata ccatcgcggt cggtgcgacc gagatcgccc
     9781 agggcaacag cgacctgtcg cagcgcaccg agcagcaggc ggcgtcgctg gaggaaaccg
     9841 cggtgtcgat gaaggggctc gccgagacag tgcagcgcac cgccaccaac gcgcgccagg
     9901 ccagccagct ggccggtggg gcggccgatg tcgccgcacg gggcggcagc gtggtgcacg
     9961 aggtggtgga gacgatggcg gtgatcaatg catcttcgcg gcgcatcgtc gacatcatcg
    10021 gcgtgatcga tggcatcgcc ttccagacca acatcctcgc actgaatgcc gcggtggaag
    10081 cagcacgtgc cggcgagcat ggacgcggct ttgcggtggt cgccaccgag atccgcgagc
    10141 tgtcgcagcg ctcggccagc gccgccaagg agatcaagca gctgatcgat gagtcggtgg
    10201 ccaacgtcgg ggccggtacc gcccaggtcg agagtgccgg ccgcaccatg gacgagatcg
    10261 tgaccaacgt gcgccgggtc agcgatctga tgaccgagat cagcaccgcc tcgcaacagc
    10321 agagcgatga catccagcag atgaaccatg cggtggacct gatcgaccag ggcacccagc
    10381 agaacgcggc cctggtcgaa gaggcttcgg ctgccgcgcg cagcatggag gagcagtcgg
    10441 cgcacctgtt gcagaccgtg gccagcttcc gtgtccagga agggactggc catgcgcatg
    10501 gggtaccggc gctgcgcgca gtctaggcgc gctggccgga cggggcctcg gcggtgccgg
    10561 gcgccggggc gaggtgcacg cagttgcgcc cgtcacgctt ggcgcgatac agggcctggt
    10621 cggcgtgagc gaccaggtca ctgggttcgc gctcatcgcc ggcggcctgc caggccacgc
    10681 ccacgctgat ggtcacctgg ccatcggcag ccggcagtgc ggcgctttcg acggcggcgc
    10741 gcagccgttc gcccagctcc agcgcgtgca ttgcctcggc cgagggcagg gcggcgatga
    10801 actcctcgcc gccgtagcgg gccagcaggt catcgccgcg ctgcaggcaa ccatcgagga
    10861 tcgcggcaac cgcgcgcagg cggcggtcac cctccgggtg cccataggta tcattgagcc
    10921 gcttgaagtg atcgatgtcg atcatcagca ccgccaggcc caggccctgg cggcgggcac
    10981 ggcggtgggc cgcgccgagt gactcatcga agctgcgccg gttgcccagc ccggtgagcg
    11041 catcgcgccg ggccagggtt tccagttcat cgcgctggcg ctggatttcg acctggctca
    11101 gcacactgcg cagggcatag ccgagcaggg cgccgaggaa gcccaccgtg gccagggtcg
    11161 gctgcaggcg ggcgaccagc agcgccacca tcatcaacag caggggcagc atcaacggca
    11221 cgccggcatc gacgatgcgc cgcagagtga gggaaatctc cgccgcggcg cggcgacgac
    11281 ggctgccggc cattactgcc agcagcacga acagtccgct gatcagcagg tccccccagc
    11341 tgccatcggg cagttgcggc tggtaggtgt tgatgtagag cgccagcagg aagtagccca
    11401 gcgcgtagag ggtcagtgtc cggaagaaat cgcggcggtc gggattgtcc tcggcaatga
    11461 agcggatcag tgcgaagcag aacaccaggc tgttctgcac gctgctcatc gtcttcaggc
    11521 actgcgtcca caacgcgggg ttcagcgggg ccatggcctg ggtgtgcacg tagtacagca
    11581 gccacagcag tgcaatgatc gccaggtcca ccgcacggat ggcgcggctt ccgcctcccg
    11641 ggctggcggc gacgtaggtc aggggaatcc ggtagaacac gtacaggatc agcgatgaca
    11701 cggtcatctg cgcgggatcg aggccagcca cgttgcggta cagcagggcc agcagtgcaa
    11761 gcgagaacag cgcgacggcg gcgccaagca tccgccattt gcaggccgcg cggctgtcac
    11821 gtgcacgccg cgcgcaggcc agtgcggcca gcagcggggc ggtgatcagc atcaggtagg
    11881 agccgaccgg gtcctgcggt ccgatcaagg caatgacgag cgcgtgcgtg accacaaaaa
    11941 acagtgcagc acgcaacgtc atgcattccc ccgccccgat ccggcgcgat cacgataggc
    12001 agaagtgcgt gaggctggca agaaaagtgt gcgctacgtc taatgccaac gttgtcacaa
    12061 gtcgcagttg tgtttcagcg agggggcgtg gccgtacctt cgagatgggc gaacatccag
    12121 aaattgcggg gctgcccccg tacacggcga taggcgtgca gcaggccttc ccgctgcatg
    12181 ccgaggcgtt ccagcacggc gatcgagcgg gcattgctgt cgaggacagt cgcctggatg
    12241 cggaccaggc ggcgtactgc gtgcccccag tcgagcactg cgcgcgccgc atgggtggcc
    12301 agcccttgtc cctgccaatg cgggtcgagg tcatacgcga gctcggcgcg gccgtgcagg
    12361 agatcgatgc cgttcaagcc gatggtgccg atcaacccgt cctcggcatc ggccagcgcc
    12421 cagcgctgat cggggccgcc cggcatatag cgggcgacct gctggcgcaa ggcgtgttcc
    12481 gagatgtcgc cccagctggt gtgttcgatc acgcccggca gagagaggta gcgggaccat
    12541 gcggccgcat catcggtccg cagggggcgt agacgtgcgg gcaaggtgtc tggaagtgac
    12601 ggcacattcg acgcaggcat gccgggcagt gtggacaccc tgggcctgga aaagcaaaag
    12661 gccaggtcat ggacctggcc tttgatgcag tggtgccggt gaaaggactc gaaccttcat
    12721 ggggtcaccc ccggctgatt ttgagtcagc tgcgtatacc attccgccac accggcaggc
    12781 agcgcgtgag tgtaaccgag gtcggcaggg ctttcatagg ggcagggcca ttcggggcgc
    12841 ttcctgtcgg catcggcccc gtgatggcta tactgcggcg gcgtgaatac ctccaggagc
    12901 ggtagccgat gacagtgttg caggacctga gggtgctggt ggtcgagaac gacgaaatga
    12961 gtgccgcgct gctgcagatg cagctggtgc atgccggcgc gaccgtggtc gggttggcgg
    13021 cgagcgtgga cgaagcgctg cgcctgctgg aggattcggc gccggacgtg gccctgctcg
    13081 actatcgcct ggcccgcaac gagaccagcg agcccgtggc ggcagcgctg tcggcacgcg
    13141 gtgtgccgtt cgtgctggcc accggcatgc tggccgagca gttgccagcg tcgatgctgg
    13201 ccggggtgct gctggtcaag ccgtacctgt cggtggatct gtcccaggcg ctggtgcgcg
    13261 cggtggggca ttcccgcatc aaggcctgat tggccgcggc gcagaggacc ggcgtatgct
    13321 gccgtggcct gaatgctcag gcctacaagg agagtggcat gaagaagtgg atcaagcgca
    13381 tggttgccgc gggtgtcctt tcgatggcgg tcttcggtgg taccgcgact gcggcatggt
    13441 gcggccagcc ctgcttccag ctctacaaga gctgcatcgc gcgcggcggt gaggtcgagc
    13501 agtgcctgca ggaacaagcc ttctgcgaag aggcgatgtg cggcggcaac ccctgatcca
    13561 gaaaccccgc ccaggcgggg tttttcatag gcgcgtggtg ttcatccggc ttcgtcgtac
    13621 acgtagcgga tgtcctcgcg gtcgtcgagg atgcggtatt gcagggccag gtcatccggg
    13681 tccggattga gccatgcgtc caggtgctcc cggcggatcg gcaccacgcc gcggtcatgc
    13741 ccggcggcgg cgacatcggg tggcggggcg tcggtgatcg tggcaaacga cagcagccgg
    13801 ccttccggcc cttcccactc tgcccacagg caggccagca gcaggtcgcg tggcggatcg
    13861 gggcggaatt ccagcactac gtcctgttcc ttctcgtcgg cgcccagcgt gcgtgcgtcg
    13921 atggcgtggc gtggcacatg ctcatagaac gcctgcacga ccacgacccc atggcgcagc
    13981 ccgaatgcgc cgcgccagta gccttccagg ctgtcgcgcc gtgcattgta ggtgccgggg
    14041 tagagcacgt cgttgcgtgc tggcgtgtcc ggcagccggc actggtagcg catcggcttg
    14101 atcacccgct ggccgttgtc gctgaccatg accggtgcgt aggtgcccgg gaagatgcgg
    14161 ttgtcgcgcg gcagcagctg cacccgatgc agatcctcca gccgggcctg cgcgcgctcg
    14221 atgcggtggc cggccacgcg caggtcgttg cgcgccttct gggtggggcg ggtcgccagc
    14281 gtggcgtggg cgatatcgcg tcgttcgcgc tgccggacca gctcggcctc cagtgcctgc
    14341 tgctcctgcg catgccattg ctggatcttt gccacgatgt cgcggccctg ttccgtgcgc
    14401 gcgccggcaa agccgtcgtc catggctttt ggggttttcg ggcgcttctt gccgggatcg
    14461 tgcgcgtaca gctcggcgaa ttcctccagc gagagaatgg cgccgaactc gcgcaccagc
    14521 ttggcgtagt cggcgcggat cagggcggaa tagcacatgc gaactctgcc ggtgtgggtc
    14581 gcagcggctg cgacgtggat gcggcaggat agcccgacac atcaggagat gccgcatgaa
    14641 tgaatccgcc acctgccagt tccgcgaagc cgtgcccacg gtcgaggact actgccggct
    14701 gcgtgtactg gcaggcctca gtgccaagca tcaggaagcc gctgcgcgcg cactgcccaa
    14761 caccctgttc ggcgtatgtg cctaccaggg caatgagctg gttgcgatgg gccgcatcgt
    14821 cggcgatggc ggctgccacc tgcaggtgtg cgacatcgcc gtgctgccac gcctgcaggg
    14881 gcagggcctg ggcaaggagg tgatgcggcg gctggacgac tggatgcggg ccagcctgcc
    14941 gccgtcggcg tacgtcagcc tgctggccga tggtgaagcg catcggttgt atgcacagtt
    15001 cggcttcgcg ccaactgcgc cggcgtcgat cgggatgtat cggcgcttct gaaatgagtg
    15061 cctggattcc aggcaaagaa aaaccccggc cgaagccggg gttctcaaga attggcgtcc
    15121 ccacggggat tcgaaccccg gtcgccaccg tgaaagggtg atgtcctagg cctctagacg
    15181 atggggacgc acgaaaaact tcaagttgta gaaccttcga cggcctaatg tcgaagtggt
    15241 ggagccaagc gggatcgaac cgctgacctc ctgcatgcca tgcaggcgct ctcccagctg
    15301 agctatggcc ccgatgaaac ctcggatgat ctgccgggag cagagtccgt ttgaaactgg
    15361 cgtccccacg gggattcgaa ccccggtcgc caccgtgaaa gggtgatgtc ctaggcctct
    15421 agacgatggg gacgcacgaa aacttcaagt tgtagaactt tcgacggcct aatgtcgaaa
    15481 gtggtggagc caagcgggat cgaaccgctg acctcctgca tgccatgcag gcgctctccc
    15541 agctgagcta tggccccgtg ttaccgagcc gcctatcata cctgcgtgtt cacgtttgtg
    15601 gaagcctttt ttcaactttt ttcgtcccgg ttcatccgaa gccacagggg caggggaacc
    15661 gcaacgccac aacctgaatg ccggtaggcg gtgaacaaaa aagacccggt tatcggccgg
    15721 gtcctcgttg ttcgtgatga gtggcgtccc cacggggatt cgaaccccgg tcgccaccgt
    15781 gaaagggtga tgtcctaggc ctctagacga tggggacgca attctcatca atgttcttta
    15841 gcgacctttc gacggcctaa tgccgaaaga ttggtggagc caagcgggat cgaaccgctg
    15901 acctcctgca tgccatgcag gcgctctccc agctgagcta tggccccacg tcgctgagga
    15961 gcgaaataat agccttgccc ccgggggttg gcaagcattt gttgcacttt tcttcacgca
    16021 cgctgcgcgg cagattcctg tcgcggtggc tacgcgttgt cgccggtcag cgccgccagg
    16081 atcgggcatt gatccagcgc accatgcccg gggcaggcgt cgaccagctg cgaaagcgcg
    16141 gtgtgcatgc gctgcagttc ggccatccgt tgcgcgatgt cctgcaggcg ggcctgtgcg
    16201 gtgtcgcgca cgctgcccat gtcctgcgag tgacgatcac tgagcgcgag cagttcgccg
    16261 atctcgtcca ggctgaagcc cagcgctttg gcgcggcgga tgaagcgcag cctgcgcagg
    16321 tccggctcgc cgaagatgcg gtagccaccg gccgagcgcg ccgccgtcgg cagcagctgc
    16381 tgccgctcgt agtagcggac ggtatcgatc ggcacgccag cctggcgggc cagttgtcca
    16441 atgttcatgg cggattcctg caggtgctgc aggtcattgt gaagcctgga gtctggtcaa
    16501 gggtcaagac ctggcccgga ggcgcgtatt cagcgcactt tgcaactttc ttcatagccc
    16561 cgccgctgga ccagttccta cccttcgcct gaaccggccg ttcgatggcc tgtaacaaac
    16621 cgaggaggtg gtctgtggat ggaatcagga acgagggatt cgtcgaggtc gcggtggtcg
    16681 agtatccggg aggcgatccg tctgccgcct ccgtactggc tgagatggct catgtcgcaa
    16741 atcgcctggc ccagcaacag cgccggccgt tcaagcgtgt gctggtcacg cgctggatcg
    16801 tacccgccag tcagaccggt gtgcaccgca tcgccggtgc ggagatgctc gatgccgcca
    16861 ttcctgcggt gatcgccgtt cccgggcaga tcagtcccgg cacctgcctg cgtgccgaag
    16921 aagtcgtgct ggactggctg cgcgcccact atgacggtgg cagcctgctg gctgcagcca
    16981 gcgaaggtgt gagcgttctt gcgcgtgcgg gcctgctggc cgggcgaacg gtcagcgggc
    17041 ctgatctggg gcggcacccg gggttgcagg cgcaggccgt gagctgggtg ccgagcgagc
    17101 gtgcgctggt cgatgacggc gatctgctga ccgtcggcgg atcgcaggcg tggcgcttcc
    17161 tggggcttcg gctgctgtac cggctgcatg gacagggcgt ggccagcgcg gtggcgcaac
    17221 agttgggcat cacggtgccg gatgcagtgc agcaggatct ggagcgcttc agcgccaatt
    17281 tcgcgcatgg tgatcgcgac gtactgaagg cgcagcgctg gctgcacacc accgcagcac
    17341 gtggcgccac cctggccgcg atctgcgagg tctcggggct ggaaccgcgg acgctgcagc
    17401 gacgcttcct ccgggccacc ggtctgcggc ccatcgagta ttgccagcgg ctgcgcatcg
    17461 ccaaggcgca gacgctgctg cagcagggcg ccggtatcga cgaagtggcc tggggggtgg
    17521 gctatgccga ccagagcgcg ttccggcgcc tgttccttcg cattgtgggc atgacgcccg
    17581 ccaactatcg ccgccacgtc agctgcaagc gacgcgagcg gccgctgatg ccttcggtcg
    17641 caggcagcct gcgtgggctg caggcgccga cgggtgcgca gctggggcga agcgccgcgt
    17701 gagacatcaa tgttgcagtc gtgcttgcaa cctgggcgtg acgcttcgac catggagtgg
    17761 atgaatgatt gaacaggtgg gttgatgtcg agtgttggac cggttccgat gccggtggtg
    17821 ttgattcttg tgtgcgctgc gctggccatg gcggttgccc gcctgtggcc acgcggaaac
    17881 gccccggagc cgctgccctc ggcggccagc atggtgctgg acatgctcct gatcggcctg
    17941 ctgtgcggtc gcatcagttt cgtggcactg aatttcgcgc tgtacggtgg cgcgccgtgg
    18001 agcattcttc agatcaccga tggtggctat catctggtgg tggtggtgct ggcggggctt
    18061 gcgtgggggc tgtggcgcct gcgccgatgg cccgtgttac gtgcgccggt gctgacagcg
    18121 gccctggtcg gcgtattgct ctggtttgga gggagccagg tattgtcgct gtggcaggag
    18181 cgccagatgc cattgccgac gctgcaggtg acggatctgc agggtggccc ggttgatctg
    18241 cagcagttcc ggggctcgcc gctggtactg aatctgtggg ccacatggtg tggcccctgc
    18301 cgccgagaaa tgccggtgct ggccgcggcg cagcacgcac atgccgatgt gcagttcgta
    18361 ttcctcaatc aaggcgaaac cctggatgag gtccagggtt ttctcgccga cgagcggctg
    18421 gtgctgggaa acgtgttgct ggacgacgac gcggccgcat caaccgtgct gggcgtgcag
    18481 gcctatcctt cgaccctctt tttcgatgcc gacgggcgcc tgcgtgaact gcacctgggc
    18541 gaactgaccg ccgctggtct tgaacacaaa ctgcgccggc tgcggtagcc tgcgcgggca
    18601 tctcactacg gagttcccat gttgtcgact tccctgcgca ccgctccggc gttgctgttg
    18661 ttgccggtca tgctggcatt ggccgcctgc agccaggccc agactccgcc aggcaagact
    18721 gcagcggcac cggccgcaag cgctccagcc gctgccaagg gtgaccgtcc cgcagtgttg
    18781 aagggcatcg aaaagcacgg cttcgaggtc gttgccgagt tcgatgcgcc gggtggactg
    18841 cgtggcttcg ccggtgtggt gggggggcag gagccggctg cggcctacgt caccgctgac
    18901 ggcaagcacg tgctggtcgg cagcctgttc gatgccgaag gcaacgacgt ggctgccgag
    18961 gccgtggaaa agctggtcgc cgcaccgatg tcggccaaga tgtggaccaa gctggaggcc
    19021 agcgcctggg tgcgtgatgg caaggccgac gcaccgcgtg tggtctatac cttcagcgat
    19081 gccaattgcc cgtactgcca caagttctgg gaagcggccc gcccatgggt cgatgcaggc
    19141 aaggtgcagc tgcgccacat catggtcggc gtaatccgcg aggacagccc ggccaaggcc
    19201 gcagccatcc tgtcggcgcg tgacccgagc gcggcgctgc tggagaacga gcaccagttc
    19261 gaccgcggtg gcatcaaggc gctgccaagc atcagccgcg agatcgccgg caaactcgat
    19321 gccaaccagg tgttgatgat cgagatgggc ttccagggta ctccgggcat tctgttccag
    19381 gatgcgcagg gccaggtgca gcgtcgtgcc ggcctgccgc agggggatga cctgcagacg
    19441 gtgctgggcc cgcgctgatc gaaacccgca tcgcatgacg tgaaccgcag gcccgcatgg
    19501 tgacatgcgg gcctgctgcg ttcagcggcc caggcgggca cagccacctg cgcagcacct
    19561 gttcttcgtc acgtctgaat cgtgactgac atcaagcatc gcgccttgat tccaatcaag
    19621 gccaaaaacg acagccggat tagcctgtga cgcatggaat acagcgtcac tacgcgatgg
    19681 atgccgcgtt cgccagcccc caatcggggt cggccggctc agccattcac gacactctca
    19741 ctccctgctt gttacccaga ccgctgcggt cgccacctct ctggcagcgc ggccttgatg
    19801 gagtcgacat gggggcaggc aggacagtgt catcgttctg ttgcctgcca cgcgcaggct
    19861 gaccggtgtc gtcgacgcag tacctgcatt tccagcaacg gcaacgcgag gccagggtgg
    19921 cgcatgcgtg cgctccggga acgtgatgcg aatgttcgtc cggggaggat gcaatgcgtg
    19981 tggcggtact gagtctggcg tgtctgggtg cactggcgat cacgccagcg tatgcgcaac
    20041 agcacgatgc ggaggataca caggcactgc ggcgcgagat tgccgccatg cggcaggtgc
    20101 tggaaggcat gcagcagcgc ctggatcggc ttgaacaacg cgacgcgacg cctgcgcctg
    20161 cgttggcgca gatgccggca gcgcctgtag cgcctggtgc tgcaacggcg gccacggctg
    20221 atgcaatcca tcgtacccag gtgccgggtg tggcacagcc ggtgctgccg caacgcgact
    20281 ccgtggctga cccgtccacc gccgcatcgc gtccggacag cgccgcaggc ccgaccgacc
    20341 ccgatctgaa gggcttcttc gccattcccg ggaccgacac ggtgatccgc atcgggggct
    20401 acgccaagct cgatgccatc gccgactcgc gcgcggcggg tgatgaggat caattcattc
    20461 cgtcatccat gccggtgggt ggcagccatc gtgatgtctc caacttcaac atccacgcca
    20521 agcagacccg cttcagcttc gaggcgcggc gaccgaccac gcacggcaat ctgcgcttct
    20581 acctggaaaa cgacttcttc ggcagcagcg acggttatga gttccggctg cgccatgcct
    20641 atggccagct tggcaatacc tacgccggct acggctactc cagcttcatg gacccggaca
    20701 gcctgcccga cacgctggat ttcgcagggc cgggcggtgc cggttatctg ctggtggcgg
    20761 gcatccacca cagcttcgcg atgggcaagg gcaacacgct caccgtcgcc gctgaagacc
    20821 cgaagaccga actggccggg gccaccgagg aacgggccgc agtgaaccgg ctgcccgatg
    20881 tgacggtgac cgcgcgcatg gagcgtgact ggggccatct gcaactgggt gcggtggcgc
    20941 gcagcctggc ctatgacggc gatggcgagc gcgaccggcg catggccggc ggcctgcagc
    21001 tcagcggctc ggcctcggtg ggcgagcgcg acctgttgtt gtttggtgcc ctgggtggcc
    21061 gcggcctaag tcgctacacc gccgacctga ccggctccgg gctggatgcc gtggtcggcg
    21121 ccgatggccg cctggatgca ttggacctgc atggtggctt cgtgggctac acccattact
    21181 ggtccgagct gtggcgttcg aacctgatct tcggccagtt gaccttggag cggaatgcgg
    21241 cactggcggc cgacgcgttc cggcagagtc gctacggggt gttcaacctg atctggagcc
    21301 cggcgccctc gtggacgatg ggcatggagc tgttgtacgg ccgcctggaa cagcagggcg
    21361 gcacgcgcgg cgacacggtc cgggtgcagg gcagcctgca atacagcttc atcaagtaag
    21421 cgccagcggc cgtacgccag cgcaaccgtc cccacgcccg gccgcaccgg gctcatgcca
    21481 gtacaggaga ttgtcatggc agaagcaaag aaaatcgggg tggtcggagc caccttcctc
    21541 gtcgccggca acatgatggg ctcgggtgtg ttcctgctgc cgtccagcct ggccaagatc
    21601 ggcaccgcct cgatctgggg ctggctgatc accactgccg gcgcgttgct gctggccttc
    21661 gtgttcgcca agctgggcaa gctggcaccg aaggcgggtg gtccctatgc ctacgcgcgt
    21721 gactggttcg ggccgtacat gggcttccag accaacacca tctactggtt cgccaactgg
    21781 atcggtaatg tcgccattcc gatcgctgcg gtggggtact tcagctactt cttcccgatc
    21841 ctgtccgagc cgctggtgcg ctgcatcgcg gtgctggtgc tggtctgggc gctcagcttc
    21901 gccaacatga tcggcccggc cttcgtcagc cgcgtgcaga cggtcaccac cagcttcgcg
    21961 ctggtgccga tcctgggcat cgccatcttc ggctggttct tcttcgatgc cgacatcttc
    22021 aagggcgcct acaacgtgtc cggtgaatcc aacttcggcg cgatctccag cgccgcggca
    22081 ctgaccctgt gggccttcat cggcgtcgaa tcggcctcgg tgaccgccgg cgtggtcgag
    22141 aacccggaaa agaacgtggc ccgggccacg ctggcgggcg tgttcctggc tgccatcgcc
    22201 tatatcgcca gctcctcggt gatcatgggc atggtaccca acggtgagct gcagacctcc
    22261 gatgcgccgt ttgcgctggc cgcggccaag gcggtcggtg gctggggcgg tgcgctggtc
    22321 agcctgtgcg ccttcatcgg tgctgccggt tcgctgggcg gctggatcct gctgaccgcg
    22381 cagagcgcca aggcggcgtc ggatgacggc ctgttcccga gcatcttcag caagaccaac
    22441 aaggatgacg tgccggtcaa gggcgtgctg atcgtagcgg tgctgatgac cctggccgtg
    22501 ctggtcacct caacctcgga aaccgcgtcc gcgcagttcg acgtgatcac gtcagcggcg
    22561 gtggtgctga cgctgctgcc ctacatctac tcgtgcgtgg cgtgctactt cgtggtcgag
    22621 cgttcgcaca cgctggtcca caccggagcg ttctggaccc tgaccagcct gaccgtcgtg
    22681 tactgcctgt gggcgatcta cggttcgtcg ggaaccatcg tgcagtacgc gttcctgttc
    22741 gtgctgttca tcaccgtgtt ctatcccttc ttcagcgagg agcgccgcca gcagcggcag
    22801 cgcgcccgcg aggcctcggc gatcagcgcc ggcgcccagc gttcctgagt tagacaagga
    22861 gaatcaacgt gtacttcaag tccctggact acccggtcat tgtcatcgac aacgactacg
    22921 agtcgccgcg catcggtggc atcctgatcc gtgcgctggt ggaggagctg cgcagcaacg
    22981 accagcgcgt gctgtgcggc ctgaacctgg atgatgcccg tgccggtgcc cgcacctacg
    23041 tggcggcctc ggcggtgctg atctcgatcg atggcagcga agaggtggac ggcgagttcc
    23101 agcgcctgac cgcgttcctg cgtgagcaga gcgcgcgccg cgccaacctg ccggtgttcc
    23161 tgtacggcga gcgccgcacc atcgagaagg tgccgagcaa gctgctcaag tacattcacg
    23221 gtttcatctt cctgttcgaa gacaccaaga gcttcatctc gcggcaggtg atgcgtgcgg
    23281 ccgaagacta catgaagaac ctgttgccgc cgttcttcaa ggccctgatc caccacgcgg
    23341 ccgagtcgaa ctactcctgg cacacgccgg gccatgccgg cggcgtggcg ttcaccaagt
    23401 cgccggtcgg ccgcgccttc caccagttct acggtgagaa caccctgcgc agcgatctgt
    23461 cgatctcggt gccggagctg ggttcgctgc ttgaccatac cggcccgatc aaggatgccg
    23521 agaacgaggc agcgcgcaac ttcggcgccg accatacctt cttcgtcacc aacggcacct
    23581 ccaccgccaa caagatcgtg tggcacggta cggtggcgcg tggcgacgtg gtgttcgtcg
    23641 atcgcaattg ccacaagtcg ctgctgcacg cgctgatcat gaccggcgcg gtgccggtgt
    23701 acttcacccc cagccgcaac gcgcacggca tcattggccc gatcagcctg gaccagttca
    23761 cgcccgagtc gctgcagcag cgcatcgccg ccaatccgct ggccagcaag gcctaccagg
    23821 ccggctccaa gccgcgcatc gcggtggtca ccaactcgac ctacgacggc ctgtgctaca
    23881 acgccgagaa gatcgccgac gagatcggca gcgcggtcga cttcctgcac ttcgacgaag
    23941 cctggtatgc ctacgccgcg ttccatccgt tctacgagaa ccattacggc atggccaagg
    24001 gcaagccgcg tgagcaggat gcgatcatct tcaccaccca ttccacccac aagctgctgg
    24061 ccgcgttctc gcaggcgtcg atgatccacg tgcgcaattc cgcacatcgc aacctggatg
    24121 ccgagcgctt caacgagtcg ttcatgatgc acacctcgac cagcccgcat tacggggtga
    24181 tcgcggcctg tgacgtggcc tcgaagatga tggaaggtga cgccggccgt tcgctggtgc
    24241 aggaaatgca cgacgaggcg atcgcgttcc gccgcgcgat gctgcacgtg cgcgatgacc
    24301 ttggccgcga cgactggtgg ttcagcgtgt ggcagcccac caaggtcgag cgcagcctgg
    24361 acaagggcga tacgccggca ccgctggtgg ccaagcgcga agagtggtac ctgcagccgg
    24421 atgcgcactg gcacggcttc gagaacctgg ttgacgacta tgtgctgatc gacccgatca
    24481 aggtgaccct gctgaccccg gggctggcga tggacggcag catgggcaag ctgggcatcc
    24541 cggcggcggt gctgagcaag ttcctgtggg gccgcggcat caccgtggag aagaccaacc
    24601 tgtactcggt gctgttcctg ttctcgatgg gcatcaccaa gggcaagtgg agcacgctgg
    24661 tcaccgagct gatggcgttc aaggagctgt acgaccgcaa cgcaccgctg agccaggcac
    24721 tgccgtcgct ggccgctgac taccccaatg cctatgccgg gtggggcctg cgtgacctgt
    24781 gcgatgcgct gcacgcgttc aaccaggaat tctcggtggc caaggtgatg cgcgaaatgt
    24841 acgtggacct gccgaccccg gtgatgaccc cggccgacgc ctacaatcac ctggtgaagg
    24901 gcgagatcga gcgggtcgac atcgagcagc tcagcggccg cgtcgccgcc accatgctgg
    24961 taccgtaccc gccgggcatc ccgaccatca tgccgggcga acgcttcggc gacagcgacg
    25021 agccgatcat ccagtcgctg cgcatcgccc gcgagcagaa tgcccgtttc ccgggcttcg
    25081 agtcggacgt gcacgggctg atcatcgagc acgatggcga tgaggcctcg tacagggtgg
    25141 aggtgctgaa ggcctgaccg gcgacggtcg gcccttcggc gaacgatgga tactgcgcgc
    25201 gagcaacgca tcctgaagtt ctcgatcggg gtgaccatcg cggtcagcgc ggtcggcttc
    25261 atcggtggcc tgctggtggg atcgcaggcc atcctgttcg atggtgtcta cagtctggtc
    25321 gacgttgccc tgacgctggt gtcgttgtcg gtactgcggc tggtggcgcg ggaacagagc
    25381 ccgcgcttcc agtacggtta ctggcacctg gagccgatgg tggaggcact cggtggggtg
    25441 attctgtcgc tggcctgcgt gtatgcgctg gccaacgcgg tgattggcct gaccacgggc
    25501 gggcacgaag tgaagttcgg gcccgcgctg tggtgggcgg cgttgctgag tgccagcaac
    25561 ctggcaatgg ccgcgttcgt cgcgcagcgt gcgcggcgcc tgcgctcggc gttgctgtgg
    25621 ctggacgtgc gtggctggct gctgggcgga ttgatgagcc tggccgtggt gctggccttc
    25681 gtgctggccc tggtgctgca cggcggtcag tggcatcact gggtgccgta cctggattcg
    25741 atcgtgctgg cgttgatcag cctggcggta ctgccggtgc cggcgcgaag cgcgtggaag
    25801 gccatgcgtg aagtgctgca ggtggcgccg gatgacctgg accggcgcgt gcagcaggtg
    25861 atgcaggcgt tcgtggccga gcgcggctat gccggcttca ccagccacgt ggcgaagatg
    25921 gggcggatgc gcttcatcga gatccatgtg ctggccgacc cggcgacacc gctgggctcg
    25981 gtgggccagg tcgatgcgat gcgtgatgag atcgcagtac ggctggatgc acgtggcagc
    26041 acgttctggc tgaccatcga tttcactgcc gatccggcct ggacctgacc cggcatcggt
    26101 agcgtcgagc aggttcgacg ctacgaaggg ccgtgatcgt tgcgcgcgcc ggactactct
    26161 gttgcgttgg atgcatttga cctcaaccgg agttgaggtc gcagactgct gcgcaatccc
    26221 ggtcatccat acgaggcctg gggcgcctag cgcaggtagt actccaccgg taccaccagt
    26281 tcctgcggcg ccttcagttc agcaggaatg ggcggcagtg gctgcgcgcg gcggaaggtc
    26341 tgcagcgcgg cgtcatccag catcggctgg ccactggact gctccagccg cagcgccagc
    26401 agccgcccct cacggtcgat gctggccctg acccaggccg tgccctgctg gcgtcgtgag
    26461 cgcgcggcgg cagggtagta gcggtaacgc tccagccgcg ccatcaggcg ggcttcccac
    26521 tggtcgctgg cggcgccggc ctggaagtcc gcagggggtg cgtctggagc gggcgg
//
LOCUS       DAOKIP010000036        26505 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.036,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000036 DAOKIP010000000
VERSION     DAOKIP010000036.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 26505)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 26505)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..26505
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.036"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            113..406
                     /locus_tag="QEL58_001331"
     CDS             113..406
                     /locus_tag="QEL58_001331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006473550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HDS1675816.1"
                     /translation="MSTEKKADFSGVSASVDSTAEQVPKADFSGVSASVDSTAEVVSG
                     GTYTVQKGDSLSKIAKQHLGDANAWKKIFEANRDVLDDPDKIFPGQTLKLPPK"
     gene            453..965
                     /locus_tag="QEL58_001332"
     CDS             453..965
                     /locus_tag="QEL58_001332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005419769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675817.1"
                     /translation="MIKTTPLQTALIAALLGSVALVGCKKKEESTDSNAAPAATAPAE
                     PAAPAPMTGAPPPMAEAAAVSVSTVTVGKTAAADKSVAPAALFAPKDDVIVSIKTDGA
                     ANNVNVGAKLTYQDGQVAGEQTATLNASGAETTNVTFKNAKGWPAGKYRAEVMVDGKA
                     AGTPQEFEVK"
     gene            1100..1972
                     /locus_tag="QEL58_001333"
     CDS             1100..1972
                     /locus_tag="QEL58_001333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015472236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675818.1"
                     /translation="MLNWIVLTTLAMASADGEVVTYVHTDALGSPVAITDSNGNVVER
                     FEYEPYGSVVGIAGADGPGYSGHVFDSTTGLNYMQQRYYSPEIGAFLSVDPVTAYGGK
                     PSLFNRYRYANSSPYNFVDPDGRVPVVTRMKDGSVKISFPTKFSGDGATPKNIATFKE
                     QVASMSGTYDIGGKETRVTVEVTDIDKSTPRAARNEIKLVNGATSHRSGRSFAELGGK
                     KGEINVLDRFDKGVVPHEVSHLGGVDDLYDKSTGLPNPARGVGIMNRVPGVVDSHAIG
                     GIITGDSAVQRRER"
     gene            2759..4981
                     /locus_tag="QEL58_001334"
     CDS             2759..4981
                     /locus_tag="QEL58_001334"
                     /EC_number="1.1.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent isocitrate dehydrogenase"
                     /protein_id="HDS1675819.1"
                     /translation="MSKILYTLTDEAPFLATQSLLPIVDAYTATAGIVVETRDISLSG
                     RILSQFPELLSDAQKVSDDLAELGQLATTPDANIIKLPNISASVPQLKAAIKELQDQG
                     YPLPDYPETPADDQQRDYKARYDKVKGSAVNPVLREGNSDRRAPLSVKNYARKHPHRM
                     GAWAADSKSHVAHMAAGDFYGSEKSATLANAGSLKITFHGKDGSAVVLKEKTAVKAGE
                     IVDAAVMSRKALAAFIGEQIADAKAQGVLFSLHLKATMMKVSDPIMFGVAVNEFYKDV
                     LAKHADVLKQAGFDANNGIGDLAARLPSLPEATRAAIEADLAAEYAQRPGVAMVNSDK
                     GITNLHVPSDVIVDASMPAMIRDSGKMWNAEGKLQDTKAVIPDRCYAGVYQAVIDDCK
                     AHGAFDPATMGSVPNVGLMAQKAEEYGSHDKTFQIAADGVVKVTDDAGNVVFEHAVEA
                     GDIWRMCQTKDAPIQDWVKLAVERARLSSTPAVFWLDAARAHDAQVIAKVETYLKNHD
                     TAGLDIRILPPVEATAFSLDRIRKGEDTISVTGNVLRDYLTDLFPIMELGTSAKMLSI
                     VPLMAGGGLFETGAGGSAPKHVQQFVEEDYLRWDSLGEFLALAASLEHLGNRYDNAAA
                     RVLAKALDEANGQFLDNDKSPSRKLGGIDNRGSHFYIALYWAQALAAQNENAALKARF
                     APLAKALTDNEQKIVDELIAVQGKAVDIGGYYRPDVAKASKAMRPSATFNAALEQLRG
                     "
     gene            5265..6230
                     /locus_tag="QEL58_001335"
     CDS             5265..6230
                     /locus_tag="QEL58_001335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019336716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675820.1"
                     /translation="MARVLVVGTDIQGEQALLQRLRLASALPDGQVRRSQDLDDCDLL
                     VIRDTPALRNAAQRMRQQRPRLQCWIEDLGGQLRDGDGHQDVLDDGAIARALRGMQVA
                     VEPLAMHAPAPIRLADGAHAITRLLRERLPLRQGQALLSDAGEPLLLMDLEHDQAVLL
                     QEPSAALVERLADAFERLQLDALTPARLQALAGDRARQPLRPLLWQWAQRSRHWQALD
                     ERLRGASVKLLRWPDFRVLGHDHDGFRLCSLLLKRACTVDECAMLLELPAAAVRDFIH
                     AAYLCGYAQLQAAPTSSVATARSVGADHGLLARLWRHLRGSERNA"
     gene            6223..6771
                     /locus_tag="QEL58_001336"
     CDS             6223..6771
                     /locus_tag="QEL58_001336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP/GTP-binding protein"
                     /protein_id="HDS1675821.1"
                     /translation="MREHKVVVLGGMGSGKSTLVRSIAAGAVIDTDVANSDRLGADKA
                     STTVALDYADIDLPNGERLRLYGTPGQQRFDFLWPILLQGARGAVLLLDARRAGMAAE
                     LQDYLQVLRPFAPALALVVAVTHLDQAPHAALDDWATRACLDDQPLPLLAVDARDREQ
                     GLLLMDVLMGEMEAHALVAAHG"
     gene            6764..7180
                     /locus_tag="QEL58_001337"
     CDS             6764..7180
                     /locus_tag="QEL58_001337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019336717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="roadblock/LC7 domain-containing protein"
                     /protein_id="HDS1675822.1"
                     /translation="MADGQVAVLPDAGQRERLQPLLHDLQQRVEGVRTVVLASVDGFA
                     LVSAGADGRGERLAAMTSAMLALAAAVGRELVLGDLQTLMLEAAGGKVLMLAIQAERR
                     APLLLMAACDQRSVIGQVLWQSRECGQAILAELSGS"
     gene            7235..7594
                     /locus_tag="QEL58_001338"
     CDS             7235..7594
                     /locus_tag="QEL58_001338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014648639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675823.1"
                     /translation="MAGLTESLNALMGIDGAQAVALVDYESGMLLGEAGAGMDMEVAA
                     AGNTEVIRAKMKTAASLNLNDTIEDILISLGKAYHIMRPVAKKKGLFFYIVLDRTKSN
                     LALARRKVQDVEAELAI"
     gene            7741..9471
                     /gene="aceK"
                     /locus_tag="QEL58_001339"
     CDS             7741..9471
                     /gene="aceK"
                     /locus_tag="QEL58_001339"
                     /EC_number="2.7.11.5"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010481032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional isocitrate dehydrogenase
                     kinase/phosphatase"
                     /protein_id="HDS1675824.1"
                     /translation="MSEPDIAAELASRIAGAIRDGFEQYHARFAAITARARQRFEQRD
                     WAGARQDAVERIALYDLCIAEQMDALRRLAGEAIGARALWLQVHARYSALLQELIDAE
                     LYKTFYNTLSRRLFATRGVDPALEFIAFDVEPSDAITHPVARHTYAVSPTRPVEALQR
                     VLADYRFDIPYAHQLRCAAAIAVRLQDDLAHWGDTPVRSIELLDTVFYRERRAYLVGR
                     VFGEHRFSPCVIALVNDERGLRADAVLTRRRDVAHLFGVSRSYFQADLATVGDAVVFL
                     RSLLPGKPIDEIYTVLGRAKQGKTERYRTFFRHFNEHPQERLVPAEGTPGMVMAVFTL
                     PSYPLVFKLIRDRFAWPKAMSRQQVEEKYALVFNLDRVGRLLDAQPYRHLRFPRDRFA
                     PALLDELLQQCAQSVRVDGDQVEVALCYVQRRFRPLNLYLREQGGEAVRAAVLDYAQA
                     ITDMARNNIFPGDMLPKNFGVSRHGRAVFYDYDELCLVSDCVFRAWPQPRSPEEAMAD
                     EPWFHVGPRDVFPERFGPFMGLPAAELAAVREHFRHLFDPQWWQQLQERFARGDYPDT
                     PPYAGAHRLA"
     gene            9533..10423
                     /locus_tag="QEL58_001340"
     CDS             9533..10423
                     /locus_tag="QEL58_001340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012512291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HDS1675825.1"
                     /translation="MMRSPLFLALALAVGCGAPLLAGDASAQTARAVRATAEMSMVLS
                     GHIEITADGSVSTLVLDQKSMLSPSIASFVEGTIAGWRFEPTLRDGKAVATRAPLHVR
                     LRGKSMADGGYEVSMTSVNFSEYDPKATDSVTDRRMTPPRYPEEVYRNGGQGEVVLMV
                     KVARDGTVADVVAEQVNMAVIGPERTLAKMRDSLAKASVSSARKWTFTPPTTGEDSTR
                     DSWTVRVPVNFALNNDRNAGPERLGRWRVFIPGPRQAVPWRRADPIEQAGSDLLQEGG
                     VYMVDGARRGVRLLTPLEQG"
     gene            complement(10458..12032)
                     /locus_tag="QEL58_001341"
     CDS             complement(10458..12032)
                     /locus_tag="QEL58_001341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010481036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HDS1675826.1"
                     /translation="MRLISPRLNLGKLILALALLSAIIALANTLLASYRVQRDQLVGN
                     TLEANRVYATKLAETTQNFLLAAQQELAYAATRLGQDDLDPQRAQDEASRLQLQTNSF
                     NSSLVVDADGLVIATSPQTLQLQGEVLHSVGNNAALAARQPMISDPYQSATGKLLVSL
                     SHPIFNRQGHYRGYVSGTLYLRQRSALHTLLGKHYYRDGSYLYVVDRHGRLLYHADGK
                     RVGDYVVGNPAVKAVVRGERGAQQVRNNLGVSMLAGYAPVPATGWGIIAQRPTEATLQ
                     PLSRLMTAVIWNAIPLGLLSLLVTWWFARRISMPLWQLARNVQGGEDTGNAINHVSGI
                     RAWYFEVAQLKHAVLHSFNALQDRIGTLNRASRTDPLTGLLNRRGLQQALDALQVQGI
                     PFAILALDIDRFKSINDAHGHDVGDAAIVHIADQMRRYSRDSDILCRAGGEEFLLLLP
                     GINAEPARQAGERLRQHIADHPFEPVGTITVSLGVAHFPSFHVDAEQALRLADKALYM
                     AKEQGRNRVVVYPYAD"
     gene            complement(12147..13163)
                     /locus_tag="QEL58_001342"
     CDS             complement(12147..13163)
                     /locus_tag="QEL58_001342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin-like domain-containing protein"
                     /protein_id="HDS1675827.1"
                     /translation="MLQPRRPIDEIHGLDPAQLHQQLPGWTTPKVIRGLVSHWPLVAA
                     ARTSDAAAVAHLASFDPGRMPVTATTAAPEAQGRLFYNEDMSGFNFRREQVPLKVVLA
                     TLLKYARDPSPPSIYVASTTLDSFLPGLAEANPLQLGVADPLTSIWIGNRSRIAAHQD
                     VPDNLACVAAGRRRVTLFAPDQVRNLYVGPLDLTPAGQAISLVDFHAPDFERFPRFRE
                     ALAQAQVAELAPGDAVFIPSLWWHHMEGLDAFNVLINSWWRPVPAWMDSPMNALMLAI
                     LAVRDLPEPQRAHWRAMFDHYVFDADTATSAQIPAHARGVLAPLHADGAAQIRQILRQ
                     RLQR"
     gene            complement(13228..16218)
                     /locus_tag="QEL58_001343"
     CDS             complement(13228..16218)
                     /locus_tag="QEL58_001343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017158727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDS1675828.1"
                     /translation="MKTYRAVPRKTMLTSALLAALAAPAWAQDAPAAGPADPATLDTV
                     QVTGIRGSLQSSMNLKRDSQGVVDGIVAEDIGKFPDTNLAESLQRISGVSIDRTSSGE
                     GSKVTVRGIGPDYNLVLLNGRQMPASNLGNGGGGLNGSRSFDFANLASESVSAVEVYK
                     TSRADNPAGGIGATINIRTMRPLESEPVISLGLKAVNDSSNDNLPRTLQGSNITGELS
                     GIFSQRYADDRFGVTLSASHQERDSGFNQATVAEGWATLYGNNTTDWRALPQPGQGYA
                     DRITNRPGPNDVYARPQNTAYNVNGVQRQRTNAQATFQWKPADNVTTTLDYTYVENKV
                     QQQRSELSVWFNYGPGDSTWTNGPVAAPIIYSEDMTNSDVSMGGAKLATRTGMHSLGF
                     NVDWEVNDALDLSFDAHNSTAESKPDSPYGSAGVLGVAAFVRGKTTVDYSGDLPIINI
                     ALPPGGVQASDALVTGSVFQNSYNKSKVQQYQGRGTFRFADYSALDFGIGHAQVENRS
                     ASAIMQRNTWGGLGTPSDYADDIWYADNMAKYFKAFSGHSDPRLTGQFLVFDFDRLID
                     RAAQVGSASDPACPSCYYAPSQYSEDIRTTEKTRSAYLQYRTSFDWSMPLHVAAGVRY
                     ERTEVESNAMVRVPTGISWGSANELNIVYAADSSFIGGRGKYDYMLPNVDLKLDLSES
                     LALRGSYSRTLGRPSWTQIQSGQSLADIVRTQGGTASRGNPGLEPLISDNFDLSLEWY
                     YGEASYASVGFFRKNIKNFISDTIVRENTGTLHTPVGGAYWNEALASGCGTTDMPCIR
                     DYIFTNHAGDPGVTYTGTNSAGQKTGTITGLPGDPIAGFDVTVPANQHSDHLDGWEVA
                     VQHLFGQSGFGVAANYTKVKSGLTFNNLSLGDQYPMIGLSDSANVVAFYDKHAWQIRA
                     AYNWRDKFLNGIGGQGPNPNYTAAYGQLDLNISYAVSEQLTLSLEAINLTDETMRTYS
                     RHTNMLRYATQTGPRYMFGVRYKF"
     gene            16626..17903
                     /locus_tag="QEL58_001344"
     CDS             16626..17903
                     /locus_tag="QEL58_001344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003483709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar MFS transporter"
                     /protein_id="HDS1675829.1"
                     /translation="MDAATTVSGQHAQGNTRALAVVTAIFFMWGFLTCLNDILIPHLK
                     AAFALTWVQAMLIQFTFFGAYFLMSLPAGRLVAALGYKRGIVAGLAIACVGALMFWPA
                     AAAHVYGLFLAALFVLATGITVLQVAANPYVALLGDERTSSSRLTLAQAMNSLGTTLA
                     PLFGGLLILSAKPRSEDELALLPQAEALAYRAAEAQSVQLPYFGLAVALFLLAVAIWM
                     FRLPTIPGVEGRASSEGRVWDVLRHRHVRLGVLAIFCYVGAEVSIGSVLVNFLSSPGI
                     GQGLTEQEATGYVSLYWGGALAGRLVGAALLARLDARHLLGLFAVAVMILLGITVTAS
                     GGLAKWAVVSIGLFNSIMFPTIFALAIARLGALTGKASSLLVMAIVGGAVIPLAMGWL
                     ADRHGLQLSFLLPVLCYVYIAFYAWKGSRLPAP"
     gene            complement(17921..18928)
                     /locus_tag="QEL58_001345"
     CDS             complement(17921..18928)
                     /locus_tag="QEL58_001345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017354587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HDS1675830.1"
                     /translation="MRSRIEDVAAVAGVSIKTVSRVLNHEPNVREQTRERVLAAVARL
                     GYKPNLSARSLAGQRSYALALVYNNPSRNYLMEIQSGMLEACHAQHYNLILGPVGTGR
                     RTQPDLAALFENSRPDGVVLIPPLTDDEVVLSYLEEQDIPFACIAPRHPEGRIGVRMD
                     ETTAVVELIGHLVAQGHRRIGHIKGPRAHGACQWRHAGYRQALRGAGIAYDPQLVVNG
                     QFSFESGVDAANILLDLDDPPTAIFAANDDMAAAVYRVAGERGLRVPRDLSVCGFDDT
                     PIAGHIYPALTTVRQPTAYMGRLATEQLIEHIRTETAGRMITVEHAVLDRESTAAPRR
                     R"
     gene            19270..21801
                     /locus_tag="QEL58_001346"
     CDS             19270..21801
                     /locus_tag="QEL58_001346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exo 1,3/1,4-beta-D-glucan glucohydrolase"
                     /protein_id="HDS1675831.1"
                     /translation="MNRPTQTLLASCLLAALAAPVGAAQAEGERLQDWPRVHSAIATD
                     AGIERRVQQILSQMTLAQKIGQMTQAEIKTITPEQVRQYYIGSVLNGGGSWPGMDKHA
                     SVQDWLKLADAYHVASLATDAKMPVPVIWGTDAVHGHNNVRGATLFPHNIGLGAAGDA
                     ELIERIGEATARSVRATGIGWVFAPTLAVAHDPRWGRTYESYSSDPAVIRSFAHAYVK
                     GAQGAFKDDGNVVTTAKHYLGDGATDNGRDQGEALVDKATMINVHAQGYYGALAEGAQ
                     TVMASFNSWNDRAAGIDYGKMHGSKALLTDALKDRMGFDGFVVSDWNGIAQVPGCRND
                     SCAQAINAGIDMVMVPDDWKAFIDNTTAQVQKGEIPMARIDDAVTRILRVKLRAGLFE
                     HKPSDSRYAGDATAVQHRELARRAVRESLVLLKNEGKVLPLRRDARVLVVGKSADNIG
                     DQSGGWSLTWQGTENSNADFPNADSVLGALRAELGTDKVSFSADGQGIDPNTFDVVLA
                     VIGETPYAETNGDILASDTVSHSRAYPQDLAVLKAATASGKPVVTVYLSGRPMYTNDL
                     LNLSSAFVAAWLPGTEGKGVTDVLVAGKGGKPAHDFRGRLSFPWPGVPCPAPIDQPDA
                     KKPALFARGYGLSYAEGGKVARLDEANPDSCGEVTVLPIFNRADTPPFALHVAAAGAT
                     QPLGNDLNATLRWPAAKPVVQVRTVQVNTQQDAKEVTWLAPAQLIARSTSRRNLGALA
                     RSNGALQFDVQLVKRPASPVKVTMQCGSGCEGGVDIAPLLGKLSPGQKQTVTVPLACF
                     AKQGVALGAVEAPFVVTADTPFAAAFTQIKLTANTANAEGAVACP"
     gene            complement(21913..23667)
                     /gene="rho"
                     /locus_tag="QEL58_001347"
     CDS             complement(21913..23667)
                     /gene="rho"
                     /locus_tag="QEL58_001347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017171708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor Rho"
                     /protein_id="HDS1675832.1"
                     /translation="MSDNTSETGSADAPAEKRVRKPRVAKAAAPAAAETSAAPAQPTL
                     PLAAAPEAPAPAAPSPSAPAAEAPASSGGGEGGEGRESGQPRQQNHQGGGQNQGQNPY
                     NQNGQQGQQGQGQGQGNRRDRFRNRRDRDRNNRFRDDGMPNDGGEQQPFVPRPHANVP
                     EGFPVYSLSDLKRMPAQKLLEIAEQLQISEGVARARKQDVIFALLKVLTRHGDGVAAD
                     GVLEILPDGFGFLRAAEASYLAGPDDTYISPSQIRRFNLRTGDHISGRIRFPKDGERY
                     FALNIVDTINGEPIEASKNKVLFENLTALFPRRRFTLERGNGSSEDITGRILDLMAPQ
                     GKGQRSLIVSQPKAGKTMMMQQVATAITTNHPDVHLIVLLIDERPEEVTEMQRTVRGE
                     VISSTFDEPAARHVQVAEMVIERAKRLVEHKKDVVILLDSITRLARAYNNVVPSSGKV
                     LTGGVDANALHRPKRFFGAARNVEEGGSLTIIATALVDTGSKMDEVIYEEFKGTGNSE
                     VHLSRRIAEKRVFPAIDINRSGTRREDLLIEPELLQKIWILRKLLHPMDEMAAMEFLL
                     DKMKNTKSNDEFFGSMKR"
     gene            complement(23896..24225)
                     /gene="trxA"
                     /locus_tag="QEL58_001348"
     CDS             complement(23896..24225)
                     /gene="trxA"
                     /locus_tag="QEL58_001348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019183509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin"
                     /protein_id="HDS1675833.1"
                     /translation="MSDKVVHVGDADFDSAVLNSKEPVLVDFWAEWCGPCKMIAPALD
                     ELADAYQGRAKIAKVNVDHNRALAAKYHVRSIPYLVVFKDGEKVGEQIGAVGKAQLAG
                     LLDKALA"
     gene            24737..26458
                     /gene="rhlB"
                     /locus_tag="QEL58_001349"
     CDS             24737..26458
                     /gene="rhlB"
                     /locus_tag="QEL58_001349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012512288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RNA helicase RhlB"
                     /protein_id="HDS1675834.1"
                     /translation="MSDKPLTDLTFSSFELHPALQAGLEGAGFTRCTPIQALTLPVAL
                     PGGDVAGQAQTGTGKTLAFLVAVVNRLLTRPALADRKPEDPRALILAPTRELAIQIHK
                     DAVKFGSDLGLRFALVYGGVDYDKQRELLQQGVDVIIATPGRLIDYVKQHKVVSLHAC
                     EICVLDEADRMFDLGFIKDIRFLLRRMPERTIRQTLLFSATLSHRVLELAYEHMNEPQ
                     KLVVEAETITAARVRQRIYFPADDEKIPLLLGLLSRSEGARTMVFVNTKVFVERVARS
                     LEKAGYRVGVLSGDVPQKKRESLLNRFQKGQLEILVATDVAARGLHIDGIKYVYNYDL
                     PFDAEDYVHRIGRTARLGEEGDAISFACERYAMGLPDIEAYIEQKIPSEPVTKELLTP
                     LPRPERPAPAAGEEGEENESVGQIFREAREARAAEEERRGGGRSGGRSGGGRGERRDG
                     ERSGERRSRGPRKPRVEGGQASAAPAEGAEAAVAQAPRPPRPPRAEGAPEGAVEGERK
                     PRKRRRRRHGRPVEGAEGVQNTAGNGASPVTPVQVVAKPVRTAADTGDSFLTRIGRKI
                     RRMLSGS"
BASE COUNT         4353 a         8530 c         9114 g         4508 t
ORIGIN      
        1 ctctcccgat tgttcagccg ccccgggggg cggcttcaca tctgcaccat ccccatttaa
       61 caacctccat ggcaacgtgc gaaccacgta gtcatgcaga cgggagttgt ggatgagtac
      121 cgagaagaaa gccgatttct ccggcgtcag tgccagcgtc gacagtaccg ccgagcaggt
      181 gccgaaggcg gacttctccg gcgtcagcgc ttcggtggac agcaccgccg aggttgtcag
      241 cggcggcacc tacaccgtgc agaagggaga ttcgctgtcg aagatcgcca agcagcacct
      301 gggcgacgcc aatgcctgga agaagatctt cgaagccaac cgcgatgtgc tcgatgaccc
      361 ggacaagatc ttcccgggcc agaccctgaa gctgccgccg aagtaagccg gcaatcgaac
      421 gccgtccgac aatcccctgg gaggaacccc gaatgatcaa gaccaccccg ctccagaccg
      481 ccctgatcgc cgccctgctg ggcagcgttg ccctggtcgg ttgcaagaag aaggaagagt
      541 cgaccgacag caacgccgca ccggcagcaa ccgcgccggc tgaaccggca gcgccggcgc
      601 cgatgaccgg cgcaccgccg ccgatggccg aagccgctgc ggtcagcgtc tccaccgtta
      661 ccgtgggcaa gacggccgcc gccgacaagt cggttgcacc agctgccctg ttcgcaccga
      721 aggatgacgt catcgtctcg atcaagaccg acggcgccgc caacaatgtc aatgtcggcg
      781 ccaagctgac ctaccaggac ggccaggtgg ccggcgaaca gaccgcgacc ctgaacgcca
      841 gcggcgcgga aaccaccaac gtcacgttca agaatgcaaa gggctggccg gccggcaagt
      901 accgcgccga ggtcatggtc gatggcaagg cggccggaac gccgcaggag ttcgaggtca
      961 agtaagtcct gccgactctc tcccggcagg actcacgatg ggcgcagccg cgaggctgcg
     1021 tcctttttta ttggttgact ctcgatcatg aaagatctca ggtacgctga acggaatatg
     1081 gaattgtggg agggatggga tgctcaactg gattgttctc acgacgctgg caatggcgtc
     1141 ggcggacggt gaagtagtca cctatgttca cacggatgca cttgggagcc ccgtggctat
     1201 tacggactca aacggaaacg ttgtcgagag attcgaatac gaaccttatg gctctgtcgt
     1261 tggaatcgcc ggggcagatg gtcctggtta ctcaggtcat gtgtttgact ccacgacagg
     1321 tctcaattac atgcagcaac gatattactc ccccgaaatc ggtgcttttc tcagtgtaga
     1381 tcccgtcact gcctatggtg ggaagccttc cctcttcaac aggtaccgat acgccaatag
     1441 cagtccctac aactttgtcg atccggatgg cagagttcct gtggttacgc gcatgaagga
     1501 cggttcggtg aagatcagct tcccaacaaa gttttcaggg gatggtgcga ctcccaagaa
     1561 catagcgacc ttcaaagagc aggtggcgtc aatgtcagga acctatgata ttggcgggaa
     1621 ggagacgcgc gtgacggtcg aggtcactga cattgataaa agtaccccgc gggccgcccg
     1681 taatgagata aagcttgtca acggggcaac ctcccaccgc agcggacgga gtttcgcgga
     1741 gttgggcgga aagaagggcg agatcaatgt cctggataga tttgacaagg gtgttgttcc
     1801 tcatgaagtg tcacatcttg gcggtgtgga cgatctttat gacaagtcga cggggctgcc
     1861 aaatcctgct cgcggcgtcg gaatcatgaa tagggttccg ggtgtggttg acagccatgc
     1921 catcggtgga atcatcacgg gggattctgc agttcaaagg cgggagcgtt gaaatgcttg
     1981 cacgcatcgt ggctttctcc gtcctcttat gttcgtttac cttgagtgcc caagagtcaa
     2041 atctttgggc ctacagctgc gaccactttc tatacggtgc ctgtcttcgc gtgcctacgg
     2101 gcatgtccgt gacctatgag gcacctgtcg acttcggcct gcaccgcgtc aggcgagatg
     2161 gtcgggaggt cgccttgatc tacgagggcg atgcacctga aaagcctgcg cccggaagca
     2221 cgccggatct gcgcttcacg gacagcggat atgccgtgtc ggggtacgca agcgcggacg
     2281 gaggttccac ccggtacgac gtctacgttc gacccagcgt gtctggcgcc ggttcgctgc
     2341 acatccgagg tgctgctgcg acggcagatg aagtcgccag cctggccgcc gtcgttggag
     2401 gattccgcgt ctgcagcttc cggcgaagca aacgcgcaca gacgttgacc tgtccgatgg
     2461 gcgccgagtg ggggcagcga ttgtcggagt gggtcgtgcg ttcctccacg agcgggaagt
     2521 cgaactagcc aaccaagcct caggctccag gccggaagct aaccagccgc gcaacacagt
     2581 ggtgcagtac cgccgcgtat ggcgcggctt tgccccgcgc ggctgaaaac gcgacaatgc
     2641 aggggtttcc ccaccgcgcg cccaccctga cggcggccgg gaaaagcgac acggttgcac
     2701 gtggcccggc gctggcgccg gccttcccct gagcactgct acagagtcca agtcccccat
     2761 gtccaagatc ctctacacgc tgaccgacga agccccgttc ctggccaccc agtcgctgct
     2821 gccgatcgtc gatgcctaca ccgccactgc cggcatcgtg gtcgaaaccc gtgacatctc
     2881 gctgtccggt cgcatcctgt cgcagttccc ggaactgctg tccgatgcac agaaggtcag
     2941 tgacgacctg gccgaactgg gccagctggc gaccaccccg gacgccaaca tcatcaagct
     3001 gccgaacatt tcggcgtcgg tgccgcagct gaaggcggcc atcaaggaac tgcaggacca
     3061 gggctatccg ctgccggact acccggaaac cccggccgac gaccagcagc gcgactacaa
     3121 ggcgcgctat gacaaggtca agggcagcgc ggtgaacccg gtgctgcgcg aaggcaactc
     3181 cgaccgccgc gcaccgctgt cggtgaagaa ctacgcgcgc aagcatccgc accgcatggg
     3241 cgcctgggcc gccgattcga agtcgcacgt cgcgcacatg gctgccggtg acttctacgg
     3301 cagcgagaag tcggccaccc tggccaacgc cggttcgctg aagatcacct tccatggcaa
     3361 ggacggcagc gccgtcgtgc tgaaggaaaa gaccgcggtc aaggccggcg agatcgtcga
     3421 tgccgcggtg atgagccgca aggcactggc cgcgttcatc ggcgagcaga tcgccgatgc
     3481 caaggcccag ggcgtgctgt tctcgctgca cctgaaggcg accatgatga aggtctccga
     3541 cccgatcatg ttcggcgtgg cggtcaacga gttctacaag gacgtgttgg ccaagcacgc
     3601 cgacgtgctg aagcaggccg gtttcgatgc caacaacggc atcggtgacc tggccgcgcg
     3661 cctgccgtcg ctgccggaag ccacccgtgc cgccatcgaa gccgacctgg ccgccgagta
     3721 cgcacagcgt ccgggcgtgg ccatggtcaa ctcggacaag ggcatcacca acctgcacgt
     3781 gccgagcgac gtgatcgtcg acgcctcgat gccggcgatg atccgcgact ccggcaagat
     3841 gtggaatgcc gaaggcaagc tgcaggacac caaggcggtc attccggacc gctgctacgc
     3901 cggcgtgtac caggccgtca tcgacgactg caaggcgcac ggtgccttcg acccggccac
     3961 catgggctcg gtgccgaacg tcggcctgat ggcacagaag gccgaagagt acggctcgca
     4021 cgacaagacc ttccagatcg ccgccgatgg cgtggtcaag gtcaccgacg acgccggcaa
     4081 cgtggtgttc gagcacgccg tggaagccgg tgacatctgg cgcatgtgcc agaccaagga
     4141 tgcgccgatc caggactggg tgaagctggc cgtcgaacgt gctcgcctga gcagcacccc
     4201 ggccgtgttc tggctggacg ctgcccgtgc ccacgatgcg caggtcatcg ccaaggtcga
     4261 aacctatctg aagaaccacg acaccgccgg cctggacatc cgcatcctgc cgccggtgga
     4321 agccaccgcg ttctcgctgg accgcatccg caagggtgag gacaccatct cggtgaccgg
     4381 caacgtgctg cgcgactacc tgaccgacct gttccctatc atggagctgg gcaccagcgc
     4441 caagatgctg tcgatcgtgc cgctgatggc cggtggcggc ctgttcgaga ccggcgccgg
     4501 cggctcggcc ccgaagcacg tacagcagtt cgtcgaagag gactacctgc gctgggattc
     4561 gctgggtgaa ttcctggcgc tggccgcgtc gctggaacac ctgggcaacc gttacgacaa
     4621 cgccgccgcc cgcgtgctgg ccaaggccct ggacgaagcc aacggccagt tcctggacaa
     4681 cgacaagtcg ccgtcgcgca agctgggtgg catcgacaat cgcggcagcc acttctacat
     4741 cgcgctgtac tgggcccagg ccctggccgc gcagaatgaa aatgccgcgc tgaaggcacg
     4801 cttcgccccg ctggccaagg cgctgaccga caacgagcag aagatcgtcg acgagctgat
     4861 cgccgtgcag ggcaaggccg tggatatcgg cggctactac cgcccggacg tggccaaggc
     4921 cagcaaggcg atgcgcccga gcgcgacctt caatgccgcc ctggagcagc tgcgcggctg
     4981 atccatcgcc gtcccgttgc gaccccggaa cccgcgcttc ggcgcgggtt tcttttttgc
     5041 gtggccggcc gcgtccaacc tgcggacaga agcgtgaaat ccgtcggctg tcgtaatgcc
     5101 gtcaagaggg catgaaactt gcccacgatg gttgtcgcag aaaggaaatg gctgcgttcg
     5161 cgatcacctc caatctgagc aatcgatcac gacggtcgcc gcaggcgatg ccctagcctt
     5221 ggcgacgcga ggccaccggg gaggtggtcg cacggggaac accgatggca cgcgtgctgg
     5281 tagtgggaac cgacatccag ggcgagcagg ccctgctgca acggttgcgc ctggcctctg
     5341 cactgcccga tgggcaagtg cggcgcagcc aggacctgga cgattgcgac ctgctggtga
     5401 tccgagatac cccggcgctg cgcaatgcgg cccagcgcat gcgccagcaa cgcccgcgac
     5461 tgcagtgctg gatcgaggac ctgggaggcc agctgcgtga tggcgatggc catcaggacg
     5521 tactggatga cggtgccatc gcccgcgcct tgcgcggcat gcaggtggcc gtggagcccc
     5581 tggccatgca cgcacccgct ccgatccgct tggccgatgg tgcgcacgcc atcacccgac
     5641 tgctgcgcga acggctgccg ctgcgccagg gccaggcact gttgagtgat gcgggcgagc
     5701 cgttgctgct gatggatctg gagcatgacc aggcggtgct gctgcaggag ccttccgccg
     5761 cactggtaga gcgcctggcc gacgccttcg agcgactgca gctggatgcg ctgacaccgg
     5821 cacgactgca ggcgttggcc ggcgaccgtg cacgccagcc actgcggccg ttgctgtggc
     5881 agtgggcgca gcgcagtcgt cactggcagg cgctggacga gcgcctgcgc ggtgcttcgg
     5941 tgaagctgct gcgctggccc gatttccgcg tgctgggcca cgatcacgat ggcttccgcc
     6001 tgtgctcgct gctgctcaag cgggcctgca cggtggacga gtgcgcgatg ctgctggaac
     6061 tgccggcggc ggcggtgcgc gacttcatcc atgccgccta tctgtgtggc tatgcgcagc
     6121 tgcaggctgc accgacgtcg tcggtagcga cggcgcgcag cgtgggtgcc gatcacggcc
     6181 tgctcgcccg cctgtggcgg cacctgcgcg ggagcgagcg caatgcgtga gcacaaggtg
     6241 gtggtgctgg gcgggatggg cagtggcaag tcgaccctgg tgcgcagcat cgcggccggc
     6301 gcggtgatcg atacggatgt ggccaacagt gatcgccttg gcgccgacaa ggcctccacc
     6361 accgtcgcgc tggactacgc cgacatcgac ctgcccaacg gcgaacggct gcgcctgtac
     6421 ggcaccccgg gccagcagcg cttcgacttc ctgtggccga tcctgctgca gggtgcgcgc
     6481 ggtgcggtgt tgctgctgga tgcgcgtcgc gccggcatgg ccgccgagct gcaggactac
     6541 ctgcaggtgc tgcggccgtt tgcaccggcg ctggcgctgg tggtggcggt cacccatctc
     6601 gaccaggcgc cccatgccgc gctggacgac tgggccacgc gcgcctgcct cgacgaccag
     6661 ccactgccgc tgctggcagt cgatgcccgc gaccgcgagc agggactgct gctgatggat
     6721 gtgttgatgg gcgaaatgga agcgcatgca ctggtggccg cgcatggctg acgggcaggt
     6781 ggcggtcctg cccgatgccg gtcagcgcga gcgcctgcag cccctgctgc acgacctgca
     6841 gcagcgggtc gaaggtgtgc gcacggtcgt gctggccagc gtggatggtt tcgcgctggt
     6901 cagcgccggt gctgacggtc gcggcgaacg gttggcggcg atgaccagcg cgatgctggc
     6961 gctggccgct gcggtggggc gcgagctggt gctgggcgat ctgcagacgc tgatgctgga
     7021 agccgcgggg ggcaaggtgc tgatgctggc gatccaggcc gaacggcgcg cgccgctgct
     7081 gctgatggca gcctgcgacc agcgcagcgt gatcggccag gtgctgtggc agagcaggga
     7141 atgtggccag gcgatcctgg ccgaactcag cggatcgtga gcccggccgc aggggaacaa
     7201 ggggctcgaa ccaacactga caaggggata cgacgtggct ggattgactg aatcgttgaa
     7261 cgcactgatg ggcatcgatg gcgcacaggc ggtggcgctg gtcgattatg aaagcggcat
     7321 gctgctgggc gaagccggtg ccggcatgga catggaagtg gccgcggccg gcaacaccga
     7381 agtgatccgc gccaagatga agactgccgc gtcgctgaac ctcaacgaca ccatcgagga
     7441 catcctgatc tcgctgggca aggcgtacca catcatgcgt ccggtggcga agaagaaggg
     7501 gctgttcttc tacatcgtgc tggaccgcac caagtccaac ctggccctgg cgcggcgcaa
     7561 ggtgcaggac gtggaggccg aactggcgat ctgagccggt agtgccggcc gctggccggc
     7621 atctgcatgg atccaccggc ggtccagggg ctgccggcca gcggccggca ctgcctgcgc
     7681 gctcgacggc gccacacacg ccagcgtatg gtgaagccgg tcctctccgg tgagccctgc
     7741 atgtccgagc ctgacatcgc cgccgagctg gcgtcgcgca ttgcgggcgc catccgtgat
     7801 ggtttcgagc agtatcacgc ccgcttcgcg gcgatcaccg cgcgtgcgcg gcagcgcttc
     7861 gagcagcgcg actgggccgg cgcccgccag gatgccgtcg agcgcatcgc cctgtacgac
     7921 ctgtgcatcg ccgagcagat ggatgccctg cgtcgcctcg ccggtgaggc gatcggcgcg
     7981 cgcgcgctgt ggctgcaggt gcacgcgcgc tacagcgccc tgctgcagga gctgatcgat
     8041 gccgagctgt acaagacctt ctacaacacc ttgtcgcggc gcctgttcgc cacccgtggc
     8101 gtggacccgg cgctggagtt catcgccttc gacgttgaac cttccgatgc catcacccat
     8161 ccggtcgcac ggcataccta cgcggtctcg cccacgcggc cggtggaggc gctgcagcgg
     8221 gtgctggccg actaccgctt cgacattccc tatgcccacc agttgcgctg cgcggcggcg
     8281 atcgcagtgc gcctgcagga cgatctggcc cattggggtg acacgccggt acgcagcatc
     8341 gagctgctcg acaccgtgtt ctatcgcgag cgccgcgcct atctggtcgg ccgcgtgttc
     8401 ggcgagcatc gcttctcgcc gtgcgtgatc gccctggtca acgatgagcg cgggctgcgc
     8461 gccgatgccg tgctgacccg gcgccgcgat gtcgcccacc tgttcggcgt gtcgcgcagc
     8521 tacttccagg ccgaccttgc cacggtgggg gatgcggtgg tgttcctgcg cagcctgctg
     8581 ccgggcaagc cgatcgatga gatctacacc gtgctgggcc gcgccaagca gggcaagacc
     8641 gagcgctacc gcaccttctt ccgccacttc aacgagcatc cgcaggaacg gctggtgcct
     8701 gccgaaggca cgccgggcat ggtcatggcg gtgttcaccc tgcccagcta tccgctggtg
     8761 ttcaagctga tccgcgaccg ctttgcctgg cccaaggcaa tgtcgcggca gcaggtggaa
     8821 gagaagtacg cgctggtgtt caacctcgac cgtgtcggcc gcctgctcga cgcacagccg
     8881 tatcgccatc tgcgcttccc gcgtgaccgc ttcgcgccgg cgctgctgga cgagctgctg
     8941 cagcagtgcg cgcagagcgt tcgcgtcgat ggcgaccagg tggaagtcgc gctgtgctat
     9001 gtgcagcgtc gcttccgtcc gttgaatctg tacctgcgcg agcagggtgg ggaggcggtg
     9061 cgggcggcgg tgctcgacta tgcgcaggcc atcaccgaca tggcgcgcaa caacattttt
     9121 cccggtgaca tgctgccgaa gaatttcggt gtgtcgcggc atgggcgtgc cgtgttctac
     9181 gactatgacg agctgtgcct ggtcagcgac tgcgtgttcc gcgcctggcc gcaaccgcgc
     9241 agcccggaag aggcaatggc cgatgagccg tggttccatg taggcccgcg cgatgtcttc
     9301 cctgagcgct tcggcccgtt catgggcctg ccagccgctg aactggccgc ggtgcgcgag
     9361 catttccggc acttgttcga tccgcagtgg tggcagcagc tgcaggagcg gttcgcgcgt
     9421 ggtgactacc ccgacacccc gccgtacgcg ggcgcccacc ggctggcgtg aacgggctgc
     9481 cgtggcggcg ccgactgggg tacgctcggt attcatcacc aaggacccgg caatgatgcg
     9541 ttcccccctg tttctcgccc tcgcgctggc cgtaggctgc ggcgccccct tgctggccgg
     9601 cgatgccagt gcacagaccg cacgcgccgt gcgcgccacg gcggaaatga gcatggtgct
     9661 ttccggccat atcgagatca ctgccgatgg ttcggtcagc acgctggtac tggaccagaa
     9721 gtcgatgctg tctccgagca tcgcatcctt cgtcgagggc accattgcag gttggcgctt
     9781 cgagccgacg ctgcgtgatg gcaaggcggt ggcgacgcgt gctccgctgc acgtgcgcct
     9841 gcgcggcaag tcgatggcag atggcggtta cgaagtcagc atgaccagcg tcaacttcag
     9901 cgaatacgat ccgaaggcga ccgactcggt gactgaccgg cgcatgacgc cgccgcgtta
     9961 cccggaagag gtctatcgga acggtggcca gggcgaggtg gtgctgatgg tcaaggtggc
    10021 ccgcgacggt acggtggccg atgtcgttgc cgagcaggtc aacatggccg tgatcgggcc
    10081 cgagcgaacc ctggccaaga tgcgcgacag cctcgccaag gccagcgtca gcagcgcccg
    10141 caaatggacc ttcaccccgc cgaccaccgg cgaggacagc acccgggaca gctggacggt
    10201 acgcgtgccg gtgaacttcg ccctgaacaa tgatcgcaat gccgggccgg agcgtctggg
    10261 gcgctggcgc gtcttcattc cggggccgcg gcaggccgtg ccgtggcgca gggcggaccc
    10321 gatcgagcag gccggtagtg acctgctgca ggagggcggc gtctacatgg tggatggcgc
    10381 caggcgcggc gtgcgcctgc tgaccccgct ggaacagggc tgagcaggat ggcggagctg
    10441 gccgggccgg ctccgcatca gtcggcgtag gggtagacca cgacccggtt gcggccctgt
    10501 tccttggcca tgtacagcgc cttgtcggcc agccgcaacg cctgctcggc atcgacatgg
    10561 aagctcggga aatgggccac gcccagtgac acggtgatgg tgcccaccgg ctcgaacggg
    10621 tggtcggcga tatgctggcg caggcgttcg ccggcctggc gtgccggctc ggcgttgatg
    10681 cccggcaaca gcagcaggaa ttcctcgccg ccggcgcggc agaggatgtc gctgtcgcgc
    10741 gaatagcggc gcatctgatc ggcgatatgg acgatggcgg cgtcgccgac gtcgtggccg
    10801 tgggcatcgt tgatcgattt gaagcgatcg atgtccagcg ccaggatcgc gaacgggatg
    10861 ccctgcacct gcagcgcatc cagggcctgc tgcaggccac gacgattgag caggccggtc
    10921 agcgggtcgg tgcggctggc ccggttgagc gtgccgatcc ggtcctgcag tgcgttgaag
    10981 ctgtgtagca ccgcgtgttt cagctgcgcg acctcgaagt accacgcacg gatgccgctg
    11041 acatggttga tcgcattgcc ggtatcttcg ccgccctgca cgttgcgcgc cagctgccac
    11101 agcggcatcg aaatgcggcg ggcgaaccac caggtgacca gcagcgacag caggccgagc
    11161 ggaatcgcgt tccagatcac tgcggtcatc aaccgcgaca gcggttgcag ggtggcctcg
    11221 gtcggacgct gggcgatgat gccccagccg gtcgccggta ccggtgcata cccggccagc
    11281 atcgacacgc ccaggttgtt gcgcacctgc tgggcgccgc gctcgccacg caccaccgcc
    11341 ttcaccgccg gattgccgac cacgtagtca ccgacccgct tgccatcggc gtgatagagc
    11401 aggcgaccat gacggtcgac cacgtacagg taggaaccgt cgcggtagta gtgcttgccc
    11461 agcagcgtat gcagtgcgct gcgctggcgc aggtacaggg tcccgctgac gtagccgcgg
    11521 tagtggccct ggcggttgaa gattgggtga gacagcgaca ccagcagctt gccggtggcc
    11581 gattggtacg gatcgctgat catcggctgg cgtgccgcca gtgccgcgtt gttgccgacg
    11641 ctgtgcagca cctcaccctg cagttgcagg gtctgcggcg aagtggcgat caccaggcca
    11701 tcggcatcca ccaccagcga ggagttgaag ctgttggtct gcagctgcag gcggctggcc
    11761 tcatcctgcg cccgctgcgg atccagatcg tcctggccga gccgggtggc cgcataggca
    11821 agctcctgct gtgcggccag caggaagttc tgggtggtct cggccagctt ggtggcatag
    11881 acgcggttgg cttccagggt attgccgacc agctggtcgc gctgcacccg gtagctggcc
    11941 agcagggtat tggccagcgc gatgatggcg ctgagcaggg ccagggcgag gatcagcttg
    12001 cccaggttga ggcggggcga aatcaggcgc atgcggggca aacgagggca gagggcgctc
    12061 ggcgcggtca ggtaccggcg gaggcggggc tgcattatcg ccacaaaagg gccgggcgcg
    12121 ggtgaagcac gcgcccgcca cgggattcac cgttgcagtc gctggcgcag gatctgccgt
    12181 atctgcgcgg cgccgtcggc gtgcagcggg gccagcacgc cacgcgcatg cgcaggaatt
    12241 tgtgcgctgg tcgccgtatc ggcgtcgaac acgtagtgat cgaacatcgc gcgccagtgc
    12301 gcgcgctggg gttcgggaag gtcgcgcacc gccaggatcg ccagcatcag tgcgttcatc
    12361 ggcgaatcca tccaggccgg caccgggcgc caccagctgt tgatcagcac gttgaacgcg
    12421 tccagtcctt ccatgtggtg ccaccagagc gaaggaatga agacggcatc gcccggcgcc
    12481 agttctgcca cctgcgcctg cgccagcgcc tcgcggaagc gtgggaagcg ctcgaaatcc
    12541 ggtgcgtgga agtcaaccag gctgatcgcc tggccggccg gggtcagatc cagcgggccg
    12601 acataaagat tgcgcacctg gtcgggggcg aacagggtga cccggcgacg ccccgcagcc
    12661 acgcaggcaa ggttgtccgg tacatcctgg tgggcggcga tgcgcgagcg attgccgatc
    12721 cagatgctgg tcagcgggtc ggccacgccc agctgcagcg gattcgcttc ggccaggccg
    12781 ggcaggaagc tgtccagcgt ggtcgaggcg acgtagatcg acggcggcga cgggtcgcgt
    12841 gcgtacttca gcagcgtggc cagcacgacc ttcagcggca cctgttcgcg gcggaagttg
    12901 aagccgctca tgtcctcgtt gtagaacaac cgcccctgcg cttcgggcgc tgcagtggtg
    12961 gcggtcaccg gcatccggcc gggatcgaag ctggccagat gggcgactgc agcggcatcg
    13021 gaggtgcgtg cggcggccac cagcggccaa tgcgagacca gcccgcggat caccttcggc
    13081 gtggtccatc ccggcagctg ctggtgcagc tgtgccgggt ccaggccatg tatttcatcg
    13141 atggggcggc gaggctgcag catgcgcgga tgtccggtgg ggtgtgtgga gccgggcctg
    13201 cgcccggctc cacgataccg tggccggtca gaacttgtag cgcacgccga acatgtagcg
    13261 tgggccggtc tgggtcgcgt agcgcagcat gttggtatgg cgcgagtacg tgcgcatggt
    13321 ctcgtcggtg aggttgatcg cttccaggct cagggtcagc tgttcgctca ccgcatagct
    13381 gatgttcaga tcgagctggc cgtaggcggc ggtgtagttc ggattgggac cctggccgcc
    13441 gatgccgttg aggaacttgt cgcgccagtt gtacgccgca cggatctgcc aggcgtgctt
    13501 gtcatagaag gcgacaacgt tggccgagtc gctcaggccg atcatcgggt actggtcacc
    13561 caggctcagg ttgttgaagg tcagccccga cttcaccttg gtgtagttgg ccgcgacgcc
    13621 gaagccggac tggccgaaca ggtgctgtac cgccacttcc cagccatcga gatggtccga
    13681 gtgctggttg gcgggcacgg tgacgtcgaa gccggcgatc gggtctcccg gcaggccggt
    13741 gatggtgccg gtcttctgcc cggccgaatt ggtgccggtg taggtcacgc ccggatcgcc
    13801 ggcatggttg gtgaagatgt agtcgcggat gcagggcatg tcggtggtgc cgcagccgga
    13861 ggccagtgcc tcgttccagt acgcacctcc caccggggtg tgcagcgtgc cggtgttctc
    13921 gcgcacgatg gtgtcgctga tgaagttctt gatgttcttg cggaagaaac cgaccgaggc
    13981 atagctggcc tcgccgtagt accactccag cgacaggtcg aagttgtccg agatcagcgg
    14041 ctccagcccc gggttgccac gactggcggt gccgccctgg gtgcgcacga tgtcggccag
    14101 cgactggcca ctctgaatct gggtccagct ggggcggccc agcgtgcggc tgtagctgcc
    14161 gcgcagcgcc agcgattcgc tcaggtccag cttcaggtcg acgttgggca gcatgtagtc
    14221 gtacttgcca cggccaccga tgaaactgct gtcggccgcg tagacgatgt tcagctcgtt
    14281 ggccgagccc cagctgatgc cggtgggtac gcgcaccatc gcgttggatt ccacttcggt
    14341 gcgctcgtag cgcacgccgg cggccacgtg cagcggcatc gaccagtcga agctggtgcg
    14401 gtactgcagg taggcgctgc gggtcttctc ggtggtgcgg atgtcctctg aatactggct
    14461 gggcgcgtag tagcagctgg ggcaggccgg atcggaggcg ctgccgacct gtgcggcgcg
    14521 atcgatcagg cggtcgaagt cgaagaccag gaactggccg gtcaggcgcg gatcgctgtg
    14581 gccggagaac gccttgaagt acttggccat gttgtccgca taccagatgt catcggcgta
    14641 gtcggacggt gttcccaggc caccccaggt attgcgctgc atgatcgccg acgccgaacg
    14701 gttctccacc tgggcgtggc cgatgccgaa gtccagcgcc gagtagtcgg caaagcggaa
    14761 cgtaccgcga ccctggtatt gctgcacttt cgacttgttg tagctgttct ggaacaccga
    14821 accggtcacc agcgcatcgg acgcctgcac gccgccgggc ggcagcgcga tgttgatgat
    14881 cggcaggtcg ccgctgtagt ccaccgtggt cttgccacgc acgaaggcgg ccacgcccag
    14941 cacgccggcc gaaccatacg gactgtccgg cttcgattcg gcggtggagt tgtgggcatc
    15001 gaacgagagg tccagcgcgt cgttcacttc ccagtccacg ttgaagccca gcgagtgcat
    15061 gccggtcctg gtggccagct tggcgccgcc catcgacacg tccgaattgg tcatgtcctc
    15121 gctgtagatg atcggcgcgg ccaccggccc gttggtccag gtgctgtcgc ccggtccgta
    15181 gttgaaccac acggacagtt cactgcgttg ctgctgcacc ttgttctcga cataggtgta
    15241 gtccagcgtg gtcgtcacgt tgtcggccgg cttccactgg aacgtggcct gcgcattggt
    15301 gcgctggcgc tgcacgccgt tgacgttgta cgcggtgttc tgcgggcgtg cgtacacatc
    15361 gttcggcccg ggccggttgg tgatgcggtc ggcatagccc tggcccggct gcggcaacgc
    15421 gcgccagtcg gtggtgttgt tgccgtacag cgtcgcccag ccttcggcca ccgtggcctg
    15481 gttgaagccc gaatcgcgtt cctgatggct ggcactgagg gtcacgccga agcggtcatc
    15541 ggcgtagcgc tggctgaaga tgcccgacag ctcgccggtg atgttcgagc cctgcagcgt
    15601 gcgcggcagg ttgtcgttgg acgaatcatt gaccgccttc aggcccaggc tgatcaccgg
    15661 ctccgactcc agcgggcgca tcgtcctgat gttgatggtg gcgccgatac cgcccgccgg
    15721 gttgtcggca cggctggtct tgtacacctc caccgccgaa accgattcgg aggcaaggtt
    15781 ggcgaaatcg aacgagcgcg agccattcag gccgccacca ccgttgccaa ggttggaggc
    15841 gggcatctgg cgaccattca acaacaccag gttgtagtcc gggccgatgc cgcgcacggt
    15901 caccttggag ccttcgccgc tggaggtacg gtcgatcgac acgccgctga tgcgctgcag
    15961 cgattcggcc aggttggtat ccgggaattt gccgatgtcc tcggcgacga tgccatcgac
    16021 cacgccctgg ctgtcgcgct tgaggttcat tgaagactgc aggctgcccc ggataccggt
    16081 gacctgcacg gtatccagcg tggccggatc ggccgggccg gcggcgggtg cgtcctgtgc
    16141 ccaggccggt gcagccagcg ctgccagcag cgcggaagtg agcatcgtct tgcgaggtac
    16201 tgccctgtac gtcttcatgc aagctccctc cccagggaat ccggttgtgt tgttgcgttg
    16261 ttctgatcgc ggttactgca cgtggccgga ttggagcgac ggttgacagc gttgtcaaca
    16321 aactgccatc aagtgcgcct gaccagcggc cgtgcaggtc gggatgtaac cgttgccagg
    16381 aagccgctcg catctgcgaa ttgcctttat tgaaggcgtt tgcagcggtt tttcagggat
    16441 gacagcgctg ccaatccgga tgcggaaaag cgttgtgcgg tgcagaacga aactgcgcgg
    16501 atgacggtgc gggggcgtgc cggggaggct gtgcggcgtg ttgacagcgc tggacaatcc
    16561 agttggcctc cgcgtgccgc gcatgaccga tggatggctt gaaacactga ccgggaggac
    16621 aggctttgga cgcagcaacg accgtcagcg gacaacacgc gcagggcaat acccgcgcgt
    16681 tggccgtggt gaccgcgatc ttcttcatgt ggggctttct cacctgcctc aacgacatcc
    16741 tcattcccca cctgaaggcc gccttcgcgc tcacctgggt gcaggcgatg ctgatccagt
    16801 tcaccttctt cggcgcctac ttcctgatgt cactgccggc cggacggctg gtcgcggcgc
    16861 tcggctacaa gcgcggcatc gtcgccggcc tggccatcgc ctgcgtgggc gcgctgatgt
    16921 tctggccggc cgctgccgcg cacgtgtacg gcctgttcct ggcggcgctg ttcgtgctgg
    16981 ccaccggcat caccgtgctg caggtggcgg ccaatcccta tgtcgcgctg ctcggtgacg
    17041 agcgcaccag ctccagccgg ctgaccctgg cgcaggcgat gaactcgctg ggcaccacgc
    17101 tggcgccgct gttcggcggc ctgctgatcc tctcggcgaa gccacgcagc gaggatgagc
    17161 tggccctgct gccgcaggcc gaagcactgg cctatcgcgc ggccgaagcg cagtcggtgc
    17221 agctgccgta cttcggcctg gcagtcgcgc tgttcctgct ggccgtcgcg atctggatgt
    17281 tccgcctgcc caccattcct ggcgtggagg ggcgcgccag cagcgaaggc cgcgtatggg
    17341 acgtgctgcg ccatcgccac gtacgcctgg gcgtgctggc catcttctgc tacgtcgggg
    17401 ccgaggtgtc catcggcagc gtgctggtca atttcctgtc ctcgccgggc atcggccagg
    17461 gcctgaccga gcaggaggcc accggctatg tttcgctgta ctggggcggc gcgctggccg
    17521 gccgcctggt gggggcggcg ctgctggcgc ggctggacgc gcgccatctg ctgggcctgt
    17581 tcgcggtggc ggtgatgatc ctgctgggca tcacggtcac cgccagtggc ggcctggcca
    17641 agtgggccgt ggtcagcatc ggcctgttca actccatcat gttcccgacc atcttcgccc
    17701 tggccatcgc ccgccttggt gcactcaccg gaaaggcgtc gagcctgctg gtgatggcca
    17761 tcgtcggtgg cgcggtgatt ccgctggcga tgggctggct ggccgatcgc catggcctgc
    17821 agctgtcctt cctgctgccg gtgctgtgct acgtctacat cgccttctat gcgtggaagg
    17881 gctcacggct gccggcgcca tgagcccgct tccgccgccg tcagcgccgc cggggcgcgg
    17941 cggtcgactc gcgatccagc accgcgtgct cgaccgtgat catgcgtcct gcggtctcgg
    18001 tgcggatgtg ctcgatcaac tgctcggtcg ccagccggcc catgtacgcg gtcggctggc
    18061 gcaccgtggt cagcgccgga tagatgtgcc cggcgatcgg ggtatcgtcg aagccgcaca
    18121 ccgacagatc gcgcgggaca cgcaggccac gttcgccggc cacgcggtat accgccgcgg
    18181 ccatgtcatc gttggccgcg aagattgccg ttggcggatc gtccaggtcc agcaggatgt
    18241 tggcggcatc cacgcccgac tcgaacgaga actggccgtt gaccaccagc tgcgggtcgt
    18301 aggcgatacc ggcgccgcgc agcgcctggc gatatccggc gtggcgccac tggcaggcac
    18361 cgtgtgcgcg gggccccttg atgtggccga tgcggcgatg gccctgcgcg accaggtggc
    18421 cgatcagttc gaccaccgcg gtggtctcgt ccatgcgcac gccgatgcgg ccttccgggt
    18481 ggcgtggtgc gatgcaggcg aagggaatgt cctgctcttc caggtaggac agcaccacct
    18541 catcgtcggt cagcggtgga atcagcacga cgccgtccgg gcgcgagttc tcgaacagcg
    18601 cggccaggtc gggctgggtg cggcggccgg tgccgaccgg ccccaggatc aggttgtagt
    18661 gctgcgcatg acaggcttcc agcatgccgc tctggatttc catcagatag ttgcgcgaag
    18721 gattgttgta gaccagcgcc agtgcatacg agcgctggcc ggccaggctg cgcgccgaca
    18781 ggttgggctt gtagcccagc cgcgccactg ccgccagcac gcgttcgcgc gtctgctcgc
    18841 gcacgttcgg ctcgtggttg agtacgcggg acacggtctt gatcgaaacc ccggcgacgg
    18901 cggcgacatc ctcgattcga ctgcgcatgg tgcgatggat cctcctggaa ggcggcgggc
    18961 acgcggcgat ggtagagcgt gctggcccgg tcgatgttgc cgaagcaggc ggatgttgcc
    19021 acgacaggag gcccgctggc acgtccggat tccttgtcgc gatgcagcac ccgggcgtga
    19081 ctgcggtggg ccacccatgc gccggagccc gtcgttgcgc ggccaccacc gcattgcgca
    19141 cgaacaacga ttgacagtac gtgagcggac ttatatgaca gcgctgtcag gagcggtgcg
    19201 caggcaccca tgccggcgtg ccatcgccgc cgcgcacgcc aggaacttca tccacggagg
    19261 tagagcccag tgaatcgccc cacccagacc cttcttgcca gctgcctgct ggccgcgctt
    19321 gccgcaccgg tcggtgccgc acaggccgag ggcgaacgcc tgcaggactg gccacgcgtg
    19381 cacagcgcga tcgccaccga cgccggcatc gaacgccgcg tgcagcagat cctttcgcag
    19441 atgacgctgg cgcagaagat cgggcagatg acccaggccg agatcaagac aatcacgccg
    19501 gagcaggtgc gccagtacta catcggctcg gtgctcaacg gcggcggctc ctggccgggc
    19561 atggacaagc acgccagcgt gcaggactgg ctgaaactgg ctgatgccta ccacgtggct
    19621 tcattggcga ccgatgcgaa gatgccggtg ccggtgatct ggggtaccga cgcggtgcat
    19681 ggccacaaca atgtgcgggg cgccacgctg ttcccgcaca acatcggcct gggcgcggcc
    19741 ggtgatgccg aactgatcga gcgcattggc gaggcgaccg cacgctcggt gcgtgccacc
    19801 ggcatcggct gggtgttcgc gcccaccctc gccgtggccc acgacccgcg ctggggccgc
    19861 acctacgaaa gctattcgtc cgacccggcg gtgatccgca gcttcgccca cgcctacgtc
    19921 aagggcgcgc agggggcgtt caaggatgac ggcaacgtgg tcaccaccgc caagcactac
    19981 ctgggcgacg gtgccaccga caacggccgg gaccagggtg aggcgctggt cgacaaggcc
    20041 accatgatca acgtccacgc gcagggctat tacggcgcgc tggccgaagg tgcgcagacc
    20101 gtgatggcct cgttcaacag ctggaacgac cgcgccgccg gaatcgacta cggcaagatg
    20161 cacggcagca aggcactgct gaccgatgcg ctgaaagaca ggatgggctt cgacggcttc
    20221 gtcgtctccg actggaacgg catcgcccag gtgccgggct gccgcaacga cagctgcgcg
    20281 caggccatca acgccggcat cgacatggta atggtgcccg acgactggaa ggccttcatc
    20341 gacaacacca ccgcgcaggt gcagaagggc gagatcccga tggcgcgcat cgacgatgcg
    20401 gtgacgcgca tcctgcgcgt gaagctgcgt gccgggctgt tcgagcacaa gccgtccgac
    20461 agccgttatg cgggtgatgc cacggccgtg cagcaccgcg agctggcgcg ccgcgcggtg
    20521 cgtgaatcgc tggtgctgct gaagaacgaa ggcaaggtat tgccgctgcg ccgcgacgcg
    20581 cgcgtgctgg tggtcggcaa gagcgccgac aacatcggcg accagtccgg cggctggtcg
    20641 ctgacctggc agggcaccga gaacagcaat gccgacttcc ccaacgccga ctcggtgctg
    20701 ggcgcgttgc gggccgaact gggtacggac aaggtcagct tcagcgcaga tggccagggc
    20761 atcgacccga acaccttcga tgtggtgctg gcggtgatcg gggaaacgcc gtatgcggag
    20821 accaacggcg acatccttgc ctcggacacg gtcagccaca gccgcgccta cccgcaggac
    20881 ctggccgtgc tgaaggccgc cacagcgagc ggcaagccgg tggtgacggt ctacctgtcc
    20941 ggtcggccga tgtacaccaa cgacctgctc aatctgtcca gcgcgttcgt tgcggcgtgg
    21001 ctgccgggca ccgaaggcaa gggcgtcacc gatgtgctgg tggccggcaa gggtggcaag
    21061 cccgcgcacg acttccgcgg ccgcctcagc ttcccgtggc cgggcgtgcc atgcccggcg
    21121 ccgatcgacc agcccgatgc gaagaagccg gccctgttcg cgcggggtta tggcctgagc
    21181 tacgccgagg gtggcaaggt cgcgcgtctg gacgaagcca atccggacag ctgcggcgaa
    21241 gtgacggtgc tgccgatctt caaccgcgcc gacacgccgc cgttcgccct gcacgtggcc
    21301 gccgctggcg caacgcaacc gctgggcaat gatctgaatg ccacgctgcg ctggccggct
    21361 gccaagccgg tggtgcaggt gcgcaccgtg caggtgaaca cccagcagga cgccaaggag
    21421 gtgacctggc tggcccccgc gcagctgatc gcgcgcagca cctcgcgccg caacctgggc
    21481 gcactggcgc gcagcaacgg cgcgctgcag ttcgatgtgc agctggtgaa gcgcccggcc
    21541 tcgccggtaa aggtgacgat gcagtgcggc agtggctgcg agggtggggt ggatatcgcc
    21601 ccgctgctgg gcaagctctc gccaggccag aagcagacgg tgaccgtgcc gctggcgtgc
    21661 ttcgccaagc agggcgtggc actgggcgcg gtggaagccc cgttcgtggt gaccgccgac
    21721 acgccgttcg ctgcggcctt cacccagatc aagctgaccg ccaacacggc caatgccgag
    21781 ggagcggtgg cctgcccgta agccgcgcgg ccgcgccggg ccaagcccgg tgcggccggt
    21841 agatccacac catgcgtgga tgccgcctat cccgacggca aaaaaaaagc cccgcagtgc
    21901 ggggcttttt tctcaacgct tcatggaacc gaagaactcg tcgttggact tggtgttctt
    21961 catcttgtcc agcaggaatt ccatcgcggc catttcatcc atcggatgca gcagcttgcg
    22021 caggatccag atcttctgca gcagttccgg ttcgatcagc aggtcttcgc ggcgggtgcc
    22081 cgaacggttg atgtcgatgg ccgggaacac gcgcttttca gcaatgcgac ggctcaggtg
    22141 cacttcgctg ttgccggtgc ccttgaactc ttcgtagatc acctcgtcca tcttcgagcc
    22201 ggtgtcgacc agcgcggtgg cgatgatggt caggctgccg ccttcttcca cgttgcgcgc
    22261 ggcaccgaag aagcgcttcg ggcggtgcag ggcgttggcg tcgacaccac cggtcagcac
    22321 cttgcccgag ctcggcacca cgttgttgta ggcgcgggcc aggcgggtga tcgagtcgag
    22381 caggatcacc acgtccttct tgtgctcgac caggcgcttg gcgcgctcga tgaccatctc
    22441 ggccacctgc acgtggcgcg cggccggctc gtcgaaggtc gaactgatga cttcgccgcg
    22501 cacggtgcgc tgcatttcgg tcacttcttc cgggcgctcg tcgatcagca gcacgatcag
    22561 gtgcacgtcc gggtggttgg tggtgatcgc ggtggcgacc tgctgcatca tcatcgtctt
    22621 gcccgccttc ggctgggaga cgatgagcga gcgctggccc ttgccctgcg gtgccatcag
    22681 gtcgaggatg cggccggtga tgtcttccga cgaaccgttg ccgcgctcca gggtgaagcg
    22741 acggcgcggg aacagcgcgg tcaggttctc gaacagcacc ttgttcttcg atgcttcgat
    22801 cggctcaccg ttgatggtgt cgacgatgtt cagcgcgaag tagcgttcgc catccttcgg
    22861 gaagcggatg cggccggaga tgtggtcgcc ggtacgcagg ttgaagcggc ggatctggct
    22921 gggcgagatg taggtgtcgt ccgggccggc caggtagctg gcttcggccg cgcgcaggaa
    22981 gccgaagccg tcaggcagga tttccagcac gccgtcggcg gcgacgccgt caccgtggcg
    23041 ggtcagcacc ttcagcagcg caaagatgac gtcctgcttg cgggcgcggg cgacgccttc
    23101 ggagatctgc agctgctcgg cgatttccag cagcttctgc gccggcatgc gcttgaggtc
    23161 gctcagcgag tagaccggga agccctcggg cacgttggca tgcgggcgcg gcacgaaggg
    23221 ctgctgctcg ccgccgtcgt tgggcatgcc atcgtcgcgg aagcggttgt tgcggtcacg
    23281 gtcgcggcgg ttgcggaagc ggtcgcggcg gttgccctga ccctgtccct ggccctgctg
    23341 gccctgctgg ccgttctggt tgtacgggtt ctggccctgg ttctggccac ccccctggtg
    23401 attctgctgg cgcggctggc cggattcgcg gccctcacca ccttcgccgc cgccactgct
    23461 ggcaggggcc tcggcggcgg gcgcgctcgg cgaaggggct gccggcgccg gtgcttccgg
    23521 cgcggcggcc agcggcaggg tcggctgcgc cggcgcggcg ctggtttcgg cggcggccgg
    23581 agcggcagcc ttggctacgc ggggcttgcg cacgcgcttt tcggcgggcg catcggcgct
    23641 gccggtttcg gaagtgttat cggacaagag cgttattcct cgcttgaagg tgcgagcgcc
    23701 cggctggggc ggcgaacgtt gggaatgggt ctggaagaca ctgcgtccag aaggtgcggc
    23761 acgcgaacgc ggccggatgt gccgacacta tcatcggcca gcggcgccgt gcaagggtcg
    23821 ccgggaacag cattcatcat gggcgcgtgg cgcccgccgg cagccgcggg cggcggctgc
    23881 cggggaacca caggatcagg ccagggcctt gtccagcagg ccggccagct gggccttgcc
    23941 gaccgcaccg atctgctcgc cgaccttttc gccgtccttg aacacgacca ggtacggaat
    24001 cgaacgcacg tggtacttgg cggccagcgc acgattgtgg tcgacgttga ccttggcgat
    24061 cttggcgcgg ccctggtagg catcggccag ttcgtccagc gccggggcga tcatcttgca
    24121 cgggccacac cactcggccc agaaatcgac cagcaccggt tccttggaat tcagcactgc
    24181 gctatcaaag tcggcgtcgc cgacatgtac aaccttgtcg ctcatcttgg tttctcgtct
    24241 tggattgcac ccggccatgc cggaggtggg tgaactgggc catgcccggt ggcgcgaccc
    24301 tcgtcgttgc ctcgcggcgc actgccgcgg tgcgttcggc ggaatgcctg gacgctcacg
    24361 gccggcagtg tacccctatc gcagggcagg gacaggcgcc ggctggaacc cagcgtatcg
    24421 tgatcgcttc gatgcccggt atgtgtcgga tttcactgtc ttcctgtaca tggggctggc
    24481 agagggcgac accagcgacc ctggccgggc cgttcaagtc cggtgtggct gggtgaaggc
    24541 cggtcgtctc ccgactcctt gagacgactc attccggttt gcccgcccga gtgcgttaaa
    24601 ctggggcatt gtgcggcgcg cggaccgggt ggtcccagcc tgccaacccg ccgcaggggc
    24661 cgcagtttgc gacggtgccc ctagacgctg aagtgccagc cgccccacgg gccggcggcc
    24721 ataccaagac ggacacatga gcgacaaacc gctgaccgat ttgaccttct cctccttcga
    24781 gctgcatccg gccctgcagg ctggtcttga aggagccgga ttcacccgct gcacgccgat
    24841 ccaggcgctg accctgcccg tcgcgcttcc cggtggtgat gtcgccggcc aggcgcagac
    24901 cgggaccggc aagaccctgg ccttcctggt cgctgtcgtg aaccgcctgc tgacccgccc
    24961 ggccctggcc gaccgtaagc cggaagatcc gcgcgcgctg atcctcgccc cgacccgtga
    25021 actggccatc cagatccaca aggatgcggt gaagttcggt tccgacctgg gcctgcgctt
    25081 cgcgctggtc tacggcggcg tggattacga caagcagcgc gaactgctgc agcagggcgt
    25141 ggacgtgatc atcgccaccc cgggccgcct gatcgactac gtcaagcagc acaaggtggt
    25201 ttcgctgcac gcctgcgaga tctgtgtgct ggacgaagcc gaccgcatgt tcgacctggg
    25261 cttcatcaag gacatccgct tcctgctgcg ccgcatgccc gagcgcacca tccggcagac
    25321 cctgctgttc agcgccaccc tcagccaccg cgtgctggag ctggcctacg agcacatgaa
    25381 cgagccgcag aagctggtgg tcgaagccga gaccatcacc gccgcgcgcg tgcgccagcg
    25441 catctacttc ccggccgacg acgaaaagat cccgctgctg ctgggcctgt tgtcgcgcag
    25501 cgaaggcgcg cgcaccatgg tgttcgtcaa taccaaggtg ttcgtcgagc gcgtcgcccg
    25561 ttcgctggaa aaggccggct atcgcgtcgg cgtgctgtct ggcgacgtgc cgcagaagaa
    25621 gcgtgagagc ctgctcaacc gcttccagaa gggccagctg gaaatcctgg tggccaccga
    25681 tgtggccgcc cgcggcctgc atatcgacgg catcaagtac gtctacaact acgacctgcc
    25741 gttcgatgcc gaagactacg tgcaccgcat cggccgtacc gcgcgcctgg gcgaagaggg
    25801 tgatgcgatc agcttcgcct gtgagcgcta cgccatgggc ctgccggaca tcgaggcgta
    25861 catcgagcag aagattccgt ccgagccggt gaccaaggaa ctgttgaccc cgctgccgcg
    25921 cccggaacgc ccggccccgg ccgctggcga ggaaggcgag gagaacgaga gcgtcggcca
    25981 gatcttccgt gaagcgcgcg aagcccgcgc cgccgaggaa gagcgtcgtg gtggtggccg
    26041 cagtggcggc cgctccggcg gtggtcgtgg cgagcgtcgc gacggtgagc gcagcggcga
    26101 gcgccgttcg cgtggcccgc gcaagccgcg cgtggaaggc gggcaggcgt ccgccgcgcc
    26161 ggctgaaggt gccgaggccg ccgtggcaca ggccccgcgt ccgccgcgcc cgccgcgtgc
    26221 cgaaggcgca ccggaagggg cggtggaggg cgagcgcaag ccgcgcaagc gccgtcgtcg
    26281 tcgccacggc cgtccggtcg aaggcgccga gggcgtgcag aacaccgccg gcaacggcgc
    26341 cagcccggtc accccggtgc aggtggtggc caagccggtg cgaaccgccg ccgataccgg
    26401 cgattcgttc ctgacccgca tcggccgcaa gatccgccgg atgctgtcgg gcagctgatc
    26461 ggcgctgccg accagcgggt agcacccgac cgttggtcgg gtggc
//
LOCUS       DAOKIP010000037        26206 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.037,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000037 DAOKIP010000000
VERSION     DAOKIP010000037.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 26206)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 26206)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..26206
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.037"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            24..206
                     /locus_tag="QEL58_001350"
     CDS             24..206
                     /locus_tag="QEL58_001350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014648926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1656 domain-containing protein"
                     /protein_id="HDS1675835.1"
                     /translation="MFVPTLLGLMVLAYLVNSGLHALLQRAGAYRHVWHPALFNLALY
                     GIVLGLLFHLLRWMQS"
     gene            203..1120
                     /locus_tag="QEL58_001351"
     CDS             203..1120
                     /locus_tag="QEL58_001351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012512536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family secretion protein"
                     /protein_id="HDS1675836.1"
                     /translation="MNKIVKKTLPVLLTSAAVIVALLVLRQLWVYYMDEPWTRDAHVG
                     ADVVQMAPDVSGLVETVDVADNQAVKKGDLLFVVDRARYRIALEQAKASLAERQASVA
                     QLRREIGRDRSLQDLVAAEDAEVRHAKLQAAQAALATAQAAVDLAELNLGRTEVRAPA
                     DGRVNDRTLRVGDYVVAGKPVLALLDTGSFRIDGYFEETRLRGVAPGQSVDIRLMGES
                     VPLRGHVESIAAGIEDRYRSNGSSLLPNVTPAFDWVRLAQRIPVRISIDEVPKGVELI
                     AGRTATVTVQTSSTKHAGKAGTAPTQAGL"
     gene            1117..2577
                     /locus_tag="QEL58_001352"
     CDS             1117..2577
                     /locus_tag="QEL58_001352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011349148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux transporter outer membrane subunit"
                     /protein_id="HDS1675837.1"
                     /translation="MNTILPRLGLIVALASLAACRTVGPDYALPEDSAFKRPQANAAF
                     IDTQNPQVAANQALPDRWWSLYNDPVLDGLITQALRDNVELKAADAHLRRAAAVYEQA
                     LDAGGFEYEAEAGVSRAQLSAESFLQEHELPVINLADGKFAVSYQFDLFGKLKRGAEA
                     ARADEQSVAAARDLAQVSVVAQVADSYLEICHANHELHVAEHSLQLQQRSRSVTQRLI
                     DAGRGTPPELARANAQVAVLEAALPPLHAQRSAAAYSLAALLGQTPGQLPAGVIDCAH
                     APALAQPLPVGDGRALLQRRPDVRQAERKLASATARIGVATAELYPDIRLGASLGAAG
                     LLEDFGTPMTQQWSIGPLISWTLPSSGTHARIHAAEAGADAALAEFDHTVLQALRETQ
                     TALDRYAQDLRRLQSLRTAQEQAALAAEQNRRLYQGGRTPYLSSLDADRSLATSDATL
                     AAAEAQVSRDQIHLFLVLGGGWQASATPAATTTAAK"
     gene            2581..4620
                     /locus_tag="QEL58_001353"
     CDS             2581..4620
                     /locus_tag="QEL58_001353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005414949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FUSC family protein"
                     /protein_id="HDS1675838.1"
                     /translation="MNALTDRQAWLFSIKTYLAAVAALYIAMAGNLSRPYWAMGTVYI
                     VSQPLLGPTRAKGVYRIVGTLVAGLATLLVLPALVETPLVLSAAMSIWLAGCLFMALL
                     NRGPRGYAFLLAGYTTAFIGFPAVTSPETIFDTVVARSEEIILGTVVAVLFASLLFPA
                     SVRPMLRARIGTWMEDAAQWCRQILERGRAHAPRNRLAADLVQFEALIEFLRRDDPRH
                     AGSAVSMERLRERMLLLLPVLSSIADRLSALRSDGQALPEGLPELIDDLHDWLDGPTS
                     ASEYARLRARISALKPQVDRDLQHLQLASLLLRLEELVDLWQDCRTLQHAIDHGTAPL
                     DRAHYRIRTERVAADKHVDYGMALFSALSAGVALMSYCVLWIALGWEGGGNGAMMAAV
                     TAAFFAAQDDPAPSMVSFLVWAMVASVVAGVYLFGVFPAVHDFGLLALVLAVVFLPLG
                     LMLHHPKSALFALPLTVNLAALLSLQNTYSANIQTFLNSSIAMFIGIGFAVVMTRLFR
                     SVGAEWTARRLVRQGWTTLAEAAEGRGQQDRQRFAARMLDLLGLLAPRLAATPEGSDI
                     ASVDMLNEARIGLNILQLRRARLELPERSREAVEHILEEIAAHYRRQIAARRPMVAAE
                     ALRERLDTSLGRVGSVAACKARDEALMGLIGLRFALFPEAKALAPGWAMSTATQP"
     gene            4675..5070
                     /locus_tag="QEL58_001354"
     CDS             4675..5070
                     /locus_tag="QEL58_001354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005421274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675839.1"
                     /translation="MSYDMMVFEASAAPREAAAFIAWFEKQTQWNERHEYDDPAVSSP
                     ALQAWFAEMAQEFPPMNGPLSNDDDDRAEVTEYSIGSQVIYGAFAYTVAEHAHGRVQD
                     LAEKHGVGFFDVSADEAAIVFPDGLVLIA"
     gene            complement(5181..7061)
                     /gene="recD"
                     /locus_tag="QEL58_001355"
     CDS             complement(5181..7061)
                     /gene="recD"
                     /locus_tag="QEL58_001355"
                     /EC_number="3.1.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019658772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit alpha"
                     /protein_id="HDS1675840.1"
                     /translation="MSLLKELHQKGQLRTLDHALATSLQRLRDDTPESVALAAALASL
                     AVSQGHAAFDPTQPQRLLEGVPEWPAAQDWLAQLRASPWVATPEQADAIAEDAPLVLE
                     HGLLYLRRYREYERQLAAGLQRIGRHPLPAPDMAALAPLFAHLFPQASGSEDHQARAA
                     GVTLRHPLALVTGGPGTGKTTTIARLLLLLAAQARQAGQPAPEVVLAAPTGRAAERMA
                     ESLRVAVQRLQEQGLDPALCAALPSTGTTLHRLLGVIPDSPRFRHHADNPLPVDVVVV
                     DEASMIDLPMMAKLVDAIASGTRLILLGDPDQLPSVEAGDVLSAILRASGDGIGTRAD
                     DAQALHGLLAPATLQPQATPRAFAGRRVQLQRGYRQSDALDLAPLAHAVREGDSSAAL
                     QLLRSGELAGVHFHEGEADPLRGQREHLLGHWRALADAADPILALQQAGRLRVLTALR
                     EGPQGARGLNSRIEQLLAGNTPGYFQGRLLLVTENSYRHRLFNGDIGICLRDGSGAMV
                     AWFPGDTVDQPRAFHPAALPAHESAFAMTVHKAQGSEFDEVWLQLPRQDSRVLSRELV
                     YTGLTRARQVLHVAGSAEVLQAALKRHASRLGGLAWRLGAEDVAEQPTRIEQPTVQGT
                     LF"
     gene            complement(7058..10738)
                     /gene="recB"
                     /locus_tag="QEL58_001356"
     CDS             complement(7058..10738)
                     /gene="recB"
                     /locus_tag="QEL58_001356"
                     /EC_number="3.1.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019658773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit beta"
                     /protein_id="HDS1675841.1"
                     /translation="MNSTIADEGIDATGHDPYLALPLEGIRLIEASAGTGKTFTLATL
                     FTRLVVEQGLRIGQILAVTFTDAATQELRKRIRERLALAARLVDLEPAEGEAPDVRLT
                     REVLQRHLQGDTESAAALKRRLQVAADEIDLASIFTIHGFCTRVLREHALESGHTFDP
                     PELLASDRELLEELAADLWRVHANDPATLEPLTWLWSTPDALAADLRALLAAPPLHPL
                     PRPVTLADPHPALQANAAELQQALREHGEQFFIDLCDAVDNKWINGVSYKQGWLHPLG
                     RQLLAWAERADPRELLANERLPALLPEALAAKTNKKFAERTPSSPLQAPLARHVALLA
                     ERDAWLRATALNFLHRLRDEATQRLQALKRTRRVQTYDDLIDGVALALEGPQRMALVR
                     QLRAQYRIALVDEFQDTDDRQWGIFHTVFGDSPEVRELGLAPALFLIGDPKQAIYGFR
                     GGDIHTYLTAKQVAQQAPVLDQNFRSRPAVLRALQALYDNGGEDAFLERDIQFEPVRP
                     GGVRIDADYLRDGRAAVALTLRVLRSGGDKAMSADASRDAATQACVAAIHQTLVDARA
                     GNAVLRGRPVQPGDIAILVRSHREATLVQRALAAVGIPAVAAGKQSLFATSEARDLRA
                     LLLALLQPADEGRLRAALATVLLGQRASAIAAMEREGDLQRGFQAQLLHWRERWQRGG
                     PFAVIADVCAEQGERLLALIDGERRLTNYLQLGELLQEASAQALGMHGLLDWLQGQMA
                     SADQDDEQQLLRLESDARRVQIITLHKSKGLEYPLVFLPFVGIDGGAPNTASHCTVHV
                     GGQRQLHWKLDKDEAWETASAQREREQRAEDARLLYVGLTRAEHALWIAVGDLAGLAK
                     TRLAPLLGDLQALRVHADVHIDDSEAPAALPQLAAEVEGELPAVRALTRRVPHDWWVY
                     SFTQLAHADAGAGSDIEAAATELPAPAADEPAGPELPLEPALPEPAAAAEDSTPVDPR
                     FMGSRFGNVLHEAMENVDFAAWGGWRPGLEAPEGQAEVLRKALHDEGYADADLGDGVA
                     VLVPLVGHTLTVPLPEGGALHSLDEGERRAEIDFHFAIEPTAVPALLQVLHAHGVSSA
                     RRGFGQRRRLEGLMTGMIDLTYVRDGRWYVLDYKSNRLPGYSPDLLAIAMRHSEYDLQ
                     ALIYTVALHRWLRFRLGAAYDYERDMGGIRYLFCRGLDAAGNGVHVDRFPLALVDALD
                     ALFAGGEQAQAELAARARGASA"
     gene            complement(10735..14082)
                     /gene="recC"
                     /locus_tag="QEL58_001357"
     CDS             complement(10735..14082)
                     /gene="recC"
                     /locus_tag="QEL58_001357"
                     /EC_number="3.1.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014039018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit gamma"
                     /protein_id="HDS1675842.1"
                     /translation="MMSDPGSDFRLYHSNSLDVLAALLARNVRAPVAGQPLLAPEVVL
                     IPQVAMRRWLQATLAAEFGVAANLEFLTPGEFVARALKANVSGEQDDLDAAGLHWKLY
                     QALRDPALLAQPPMRALQSYLAGGDALKPWALAGELASVFEKYQAWRRDWLLRWAAGA
                     DPADPQAILWRTITHGHDYRARRIQEYLDRFEGAGQPLPKGLPLRMSAFATLNISPDV
                     LRVMATQARVGELHFYMPTPVQSYWGDLQTLAERLRSGAPDPFGEAAGENRLLEAWGA
                     AGRDFMAVLGSYEVVHPAGEIAAYSDPEEDTRPTLDEGGLSDSLLHRLQRDLFHRRAL
                     PSGELRDGLRSDDPSLQVHACHTRLRELQVLHDQLRSLLQDARFDPPLQAREIAVLAP
                     DIDPYVPYLEAVFGGRGGEEEHIPYALADSSPLAGEPLADVFVHLLGLPVSRFGLNEV
                     LDLLASAPLAEAAGLEAVDFDRLHGWLQQAGARWGLDAKHRDQHQAPADDAYTWQFAL
                     DRLVLGHATGSEADLAGVAPWIELEGGALEALDRLLRLLRVLAVYQRRLGELLTPAQW
                     RQRLLSLLDALLPTAPSSPNSQRALERLRKLLNQFAEDAAKAGFNEGVPPEVVRAHFA
                     GALGEADTRAPLLTGGISFGRMVPMRLLPFRVICVLGLNDGDFPRRDPAAGLNQLTAE
                     LDTPRRRPGDRSTREDDRFLFLQLFAAAQEVFYLSYLGADPRDGSVREPSVLVSELID
                     AAAAYHLDPPAAVRDFTVRHALQPFSPAAFGDGDPRRFSYRRQWHPAAGRLTGQRGGL
                     LPWFDAPLPPPLDDAVEDEVALDTLRRFLCDPAGQFLAQSLGLRLADEVEEVDDLEPL
                     VLSSRGPEKRSVQAAVVRATLNGDSEPLYPRLRARGLLPSGALGERQFEVEQLKTRPY
                     ASALLGWMQGEPLESRRYEVDIDGVRLHGRVADRHPEGLVRLRAGTLNGNAVIRQGLD
                     WLLANAAGDALPLVQFHDGGDAGPGPHVLPALSVPAARAALRALLQLRQRGLREPLRF
                     APYTGWVLYNTAGEKQRSEGWKQWHGSDRSWGESSSDAWQLLLRGADPFATDAGYADL
                     LRNSQVVFSAVREGRTLGAEAGQEGRA"
     gene            14272..15060
                     /locus_tag="QEL58_001358"
     CDS             14272..15060
                     /locus_tag="QEL58_001358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005421258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HDS1675843.1"
                     /translation="MSASASSLVQLSNVRIDRSGRTILRDVSLQVPKGSITAVLGPSG
                     SGKSTLLAALTGELRPVAGEVTLFGKPIPHDSSALLEMRKSVGVLLQGNGLLTDLTVA
                     ENVALPLRTHTRLPAVVLRRLVQMKLHAVGLLAAAEAWPRELSGGMARRVALARALAL
                     DPPLMIYDEPLTGLDPIASGVIMSLIQRLNHSLGLTSIIVSHHVHETLPICDQVIAIA
                     NGGIVFQGTPEALQSSQDPLLRQFLHGQPDGPIPFDAAPRARVA"
     gene            15060..15809
                     /locus_tag="QEL58_001359"
     CDS             15060..15809
                     /locus_tag="QEL58_001359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019337964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDS1675844.1"
                     /translation="MPFVQATRSLGRAGLFSLTVLRGSLPTRDFLAELTREIYKIGAR
                     SLPIIAVGGAFVGLVLTLQGYRTLTTFGAADALSTLLGLSLYRELAPVLTALLFIGRA
                     GSSIAAELGLMRATDQIKALELMAIDPVAKAVAPRFWAAVLTVPLLTGIFCSLAISAS
                     YFEAVHVLGLDNGVFWSALRNSVDFWDDFGVAMLKSAIFGGTAALVAAYVGFHAEPTI
                     EGTSVATTRAVVNASLLVLMFNFVLSAMLFT"
     gene            15869..16393
                     /gene="mlaD"
                     /locus_tag="QEL58_001360"
     CDS             15869..16393
                     /gene="mlaD"
                     /locus_tag="QEL58_001360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipid asymmetry maintenance
                     protein MlaD"
                     /protein_id="HDS1675845.1"
                     /translation="MAIRGPRLEFSVGAFLLLALASLMVLAVASTNQRWSWGSQGYEL
                     KARFSQVGQLRKQAPVKIGGVTVGQVASIDLDPVKFESIVTLRMDSKVKDLPADTSAG
                     IFTSGLLGESYIGLQPGGDPDVLKAGDEIVFTQPAVDLIQLVGKYMFSGGAGGGAGQK
                     PNDGAQAPATEPQP"
     gene            16390..17052
                     /locus_tag="QEL58_001361"
     CDS             16390..17052
                     /locus_tag="QEL58_001361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005411707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDS1675846.1"
                     /translation="MKMKLIPALLASALLAATPFLAQAQAAAPAAAATQGQAGKVVID
                     ASTRILTTLQQRRSEFSSNPASLRSYIDSELNRTFDRDYAARLVLGPHARGASDADIK
                     LFADAMADSLMQRYGSTLLNIQGKPSFRLKGESPLPGNRGVRVSTELVRAGSEPTPVE
                     YWMRNVNGQWKIFDVNIEGISYVQTFRNQFDTPLRQKGIKQVASELHSGSMQAGPAGN
                     GK"
     gene            17042..17353
                     /locus_tag="QEL58_001362"
     CDS             17042..17353
                     /locus_tag="QEL58_001362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005411708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="STAS domain-containing protein"
                     /protein_id="HDS1675847.1"
                     /translation="MASNALALLEGDTLRLRGVLDRAAVIALWPQLQALPAQLARLEL
                     GEVERVDSAGLALLAELAARARKAGHPLAISGAPAGYNELSAAYRLSPDLDFNATSAA
                     S"
     gene            17355..18371
                     /locus_tag="QEL58_001363"
     CDS             17355..18371
                     /locus_tag="QEL58_001363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005411709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VacJ family lipoprotein"
                     /protein_id="HDS1675848.1"
                     /translation="MNVVRTLPLIVLATALTACAGKPARSDAPVASTVVPANAAAEAP
                     AAVADGGTVDPAVAAPAAQAPVATAPSPATPAAPVDGNAANTAAATAPGGDDDFDALY
                     GGAGNTTNAAAYDPWEPFNRKVHTFNNAVDRGIARPLATAYTHVVPRFARTGVSNFFS
                     NLRAPVTITNQLLQGRGADAWDSLGRFLMNSTLGIGGLFDPASKAMVPRRNEDFGQTL
                     GVWGWRRSRYVELPFFGPRTVRDVFGLAGDIPLSPIRRIEEDKVRIGLQGLQLVDTRA
                     QLLAIDDLRDTAVDEYSLVRDAWMQRRNYQIENDLRSKRDRGHDDANSPIPVDAMPMP
                     QWTH"
     gene            complement(18471..19016)
                     /locus_tag="QEL58_001364"
     CDS             complement(18471..19016)
                     /locus_tag="QEL58_001364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014648938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione peroxidase"
                     /protein_id="HDS1675849.1"
                     /translation="MSTSIQDISLTTIDGQPSSLADYRGKVLLLVNVASKCGLTPQYE
                     GLQALYAEKHAQGLEVLGFPANNFLGQEPGSDAEIQQFCQLTYDVSFPMFSKISVAGD
                     DTHPLYQQLTAAQPQSIGEGPLRERLASKEIPIHPAPAVLWNFEKFLVGRDGKVVARF
                     APDVAADDARLREAIEAALAA"
     gene            complement(19103..19501)
                     /locus_tag="QEL58_001365"
     CDS             complement(19103..19501)
                     /locus_tag="QEL58_001365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012512547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675850.1"
                     /translation="MRLRFYTSLVLTVLLAACSSAPPAVATAGQAGVAATPEATEAYR
                     EARDVDCQAAGGTLQRLGRLQREQCVIPYADAGKACSGKSDCTGQCLAGGEAAAGSAT
                     TGTCQRDASQNFGCRQRIEDGKAQGTICVD"
     gene            complement(19573..21129)
                     /gene="rmuC"
                     /locus_tag="QEL58_001366"
     CDS             complement(19573..21129)
                     /gene="rmuC"
                     /locus_tag="QEL58_001366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005411712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA recombination protein RmuC"
                     /protein_id="HDS1675851.1"
                     /translation="MQTEFLLIGALLLAVLILQLVALLRRPPHDRLEQAVREEARSGR
                     SELREQLDGFARALTDLSTRTDQRLDLLREALGEDARKARAEAADSQQRGAALMGQRL
                     QELRGQLETFGQQQEARIHAFGQQLQELTARTDTQLGALRQTLVDDARKGREEGAQSQ
                     QRLTESLGLRLQELTQRNEQRIAEMRTTLEEQLRALQNDNAQKLEQMRHTVDEKLQST
                     LETRLGNSFKLVSERLEQVQRGLGEMQQLATGVGDLKRVLTNVKNRGSWGEVQLENIL
                     EQTLTQEQYARAVKVRPDSGEMVDIAVRLPGRSSDDTPVWLPIDSKFPREDYERLLDA
                     QEQGDAEGVRLQGIQLERAVRVQAKSICDKYIAPPHTTDFAVMFLPTEGLYAEVIRRP
                     GLVDLLQREHRVVVAGPTTVTALLNSLQMGFRTLAIEQRSSEVWSLLGAVKSEFGKFA
                     GILEKAEKQITTVGRSIGEASRKTRTIERRLRGVESLAAEQAQSLLGDLAEGDATGEA
                     EDEGSDGEEA"
     gene            21175..21780
                     /locus_tag="QEL58_001367"
     CDS             21175..21780
                     /locus_tag="QEL58_001367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012481678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase N-terminal
                     domain-containing protein"
                     /protein_id="HDS1675852.1"
                     /translation="MLALYGKPTSINVRKVLWLCAGLDLPLHHEPAPAPDLLATLNPN
                     RQVPVLRDGGFLLWESNSICRYLATRAGRDDLLPATAQARARVEQWMDWQASDLNSAW
                     RHVFMARVRQHPDYPDDARAEASLVQWNRLMGVLDAQLAATNSYVAGNTFTLADVVLG
                     LSTQRWRSTPGSTPALPNVGAWFERLRQQPGFAEHVDNGVA"
     gene            complement(21821..22828)
                     /locus_tag="QEL58_001368"
     CDS             complement(21821..22828)
                     /locus_tag="QEL58_001368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008573087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding alcohol dehydrogenase family
                     protein"
                     /protein_id="HDS1675853.1"
                     /translation="MRAIAYTQAGLPIDDAQALIDIELELPQPGPRDLRVAVRAVAVN
                     PVDTKVRRGVATDGPRVLGWDAVGIVDAVGSEVTLFQPGDAVYYAGVIDRPGSNAEYQ
                     LVDERSVGRKPASLGDAAAAALPLTAITAWELLFDRLRIAEGGGEGQTLLVIGAAGGV
                     GSILVQLARKLTKLTVIGTASRPDTQDWVYAMGAHHVIDHSLPLAEGLARLGISEVQH
                     VASLTHSDQHYAQIVELLAPQGQFGLIDDPGPVDVMALKRKALSLHWESMFTRPLYKT
                     ADMQRQHDLLNRVAELIDAGVLQTTLGEHFGRIDAANLRRAHALLESHRAKGKIVLEG
                     W"
     gene            22920..23891
                     /locus_tag="QEL58_001369"
     CDS             22920..23891
                     /locus_tag="QEL58_001369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010487462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDS1675854.1"
                     /translation="MKMIRFDDLQLFVRTAALGSFSQAAREADLLPGQVAAAVARLER
                     ELDLRLFVRTTRSLRLTGEGALYLPYAQEVLATLREGQARVQGEDTELHGTLQLSAPS
                     DFGRNLLLPWLSAFRAAHPRLRLHLRLSDEVADVFRDPVDVAIRIGHFDDANYVALPL
                     LEGNRRVLAASPDYLQRRGTPGRLEDLREHDCLVYQLSGRAYDRWSFDVEGRRSVIPV
                     RGPLVCDDADVVRRWAVAGEGITYKSWLDLREDVQAGRLQLLLDGVGSSIPLQLVCPH
                     RKQFSPAVRQLHAQLRQHLQPLLSGMPGGPASPLSPSAALADNGGPP"
     gene            23907..24536
                     /gene="leuE"
                     /locus_tag="QEL58_001370"
     CDS             23907..24536
                     /gene="leuE"
                     /locus_tag="QEL58_001370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucine efflux protein LeuE"
                     /protein_id="HDS1675855.1"
                     /translation="MPWMGIQDLWTFLVAVLVFLALPGPGTFTLLTATGRGGVRGGYT
                     ALAGLLVGDQILMWLALAGVAALLKANPLVFHAVQYLGAAYLVWVGISLLRTPKHDGG
                     DAGPIRMQPGRYFQQAILVSLLNPKAILFYMAFLPLFIDPKAHQGIATFAALAGIILV
                     VSIAYCSMLIGVGNLARRRLIQHPRISDALRRVAGLFLVGFGIRLGLNG"
     gene            24782..>26206
                     /locus_tag="QEL58_001371"
     CDS             24782..>26206
                     /locus_tag="QEL58_001371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005411719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HDS1675856.1"
                     /translation="MSLFRRKSLDSVTVHEAGRRLIPTLSWPHLIALGIGAIVGTGIY
                     TLIGVGANLAGPAVLISFAIAGAVCACAALSYAELSTMMPAAGSAYTYSYSALGEVFA
                     WVVGWSLILEYSLVVSTVAVGWSGYFVGFLEWVHTQFGWNVHLPAWLAAGPHVEGGMI
                     NLPAIVITWLVAGMLMAGTKESATLNAILVVFKLIALAIFVAVALPAFDSANLQPFMP
                     YGFAKSIGPDGVEHGVMAAAAIIFFAFYGFDAISTAAEETKNPGRDLSIGIIGSMIGC
                     TIVYVLVALAAVGAMSYAVFGHSAEPLALIMRQLGHPTAAMVIGVIAIIALPTVLLAF
                     LYGQSRIFFVMSRDGLLPRGLSKVNARTGTPVATTLFTAVVVSALAGVARLDEIAALA
                     NAGTLAAFTAVGICLVVLRLREPNRERTFRTPLAFVVGPLAALGCIYLFISLPHRTQL
                     YFLLWNVAGLVLYFLYSRRHALIAK"
BASE COUNT         3914 a         9190 c         8912 g         4190 t
ORIGIN      
        1 ccggtgaatt cagtctccac ggagtgttcg tcccgaccct gctcgggttg atggtgttgg
       61 cctatctggt caacagcggc ctgcacgcgc tgctgcagcg tgccggcgcc taccgccatg
      121 tatggcaccc ggcgctgttc aacctggcgc tgtacgggat cgtgcttggc ctgctgttcc
      181 acctcctgcg ttggatgcaa tcgtgaacaa gatcgtgaag aagaccctgc cggtgctgct
      241 caccagcgca gccgtgatcg tggccctgct ggtgctgcgc cagctgtggg tctattacat
      301 ggatgagccg tggacccgcg acgcccatgt cggcgccgac gtggtgcaga tggcgccgga
      361 tgtgtccggg ctggtggaaa cggtggacgt ggccgacaac caggcagtga agaagggcga
      421 cctgttgttc gtggtcgacc gcgcgcgcta ccgcatcgca ctggagcagg ccaaggccag
      481 cctggccgag cgccaggcct cggtggcgca gctgcgccgc gagatcggcc gcgaccgcag
      541 cctgcaggac ctggtcgccg ccgaggacgc cgaagtgcgc cacgccaagc tgcaggctgc
      601 acaggccgcg ctggccaccg cacaggccgc agtcgacctg gccgaactca acctgggccg
      661 caccgaggtg cgcgcaccgg ccgatggccg ggtcaacgac cgcaccctgc gcgtgggcga
      721 ctacgtggtg gccggcaagc cggtgctggc gctgctggat accggctcgt tccgcattga
      781 tggctatttc gaggaaaccc gcctgcgcgg cgtggcgccg gggcagagcg tcgacatccg
      841 cctgatgggc gaatcggtgc cgctgcgcgg ccatgtcgag agcatcgctg ccggtatcga
      901 ggaccgctac cgcagcaacg gcagcagcct gctgccgaac gtgaccccgg ccttcgactg
      961 ggtgcggctg gcgcagcgta tcccggtgcg catcagcatc gacgaggtgc ccaagggcgt
     1021 ggaactgatc gccggccgca ccgccacggt gaccgtccag accagcagca cgaagcacgc
     1081 aggcaaggcc ggcaccgcgc cgacacaggc gggcctgtga acaccatcct gccccgtctc
     1141 ggcctgatcg tcgcgctggc cagcctggcc gcgtgcagga ccgtcggccc cgactacgcc
     1201 ctgccggaag actcggcgtt caagcgcccg caggccaatg cggccttcat tgacacccag
     1261 aacccgcagg tggccgccaa ccaggcgctg cccgaccgct ggtggtcgct gtacaacgac
     1321 ccggtgctgg acgggctgat cacccaggcg ctgcgcgaca acgtggaact taaggccgcc
     1381 gatgcgcatc tgcgccgtgc cgccgccgta tacgagcagg cgctggacgc gggcggcttc
     1441 gagtacgagg ccgaggccgg cgtcagccgc gcgcagctgt cggccgaatc gttcctgcag
     1501 gaacacgagc tgccggtgat caacctggcc gacggcaagt tcgcggtcag ctaccagttc
     1561 gacctgttcg gcaagctcaa gcgcggcgcc gaagcggcgc gcgccgacga acagtcggtg
     1621 gccgccgcac gcgacctggc ccaggtcagc gtggttgcgc aggtggccga cagctacctg
     1681 gaaatctgcc atgccaacca cgagctgcat gtggccgagc attcgctgca actgcagcag
     1741 cgcagccgtt cggtcaccca gcgcttgatc gatgccggtc gtggcacgcc gccggagctg
     1801 gcccgcgcca atgcacaggt ggcggtgctg gaagctgcac tgccgccgct gcatgcgcag
     1861 cgttcggcgg ccgcctattc gctggccgcg ctgctcgggc agaccccggg ccagctgccg
     1921 gccggcgtga tcgactgcgc gcacgccccc gccctggcgc agccgttgcc ggtgggcgat
     1981 ggtcgtgcgc tgctgcagcg tcgcccggac gtgcgccagg ccgagcgcaa gctggcctcg
     2041 gccactgcac gcattggcgt ggccaccgcc gagctgtacc cggatatccg cctcggtgcc
     2101 tcactcggtg ccgccggcct gctggaggac ttcggcacgc cgatgaccca gcagtggtcg
     2161 atcggcccgc tgatctcgtg gacgctgccg tcgtccggca cccacgcccg catccacgcc
     2221 gccgaagccg gtgccgatgc ggcgctggcc gagttcgacc acaccgtgct gcaggcgctg
     2281 cgcgagaccc agacggcgct ggaccgctac gcgcaggacc tgcgccggct gcagtcgctg
     2341 cgcaccgcgc aggaacaggc tgcattggcc gccgaacaga accgccggct gtaccagggc
     2401 ggccgcacgc cgtacctgtc cagcctggat gccgaccgca gcctggccac cagcgatgcc
     2461 accctggccg cggccgaagc gcaggtgtcg cgcgaccaga tccacctgtt cctggtgctg
     2521 ggtggcggtt ggcaggccag tgccaccccg gccgccacca cgaccgccgc gaagtaagcc
     2581 atgaacgcgc tgaccgaccg ccaggcctgg ctgttctcga tcaagaccta cctggccgcg
     2641 gtggccgcgc tgtacatcgc catggccggc aacctgtcgc gcccgtactg ggcgatgggc
     2701 acggtgtaca tcgtcagcca gccgctgctg ggcccgaccc gggccaaggg cgtgtatcgc
     2761 atcgtcggca cgctggtggc cggcctggcc accctgctgg tgctgccggc gctggtggag
     2821 actccgctgg tgctgagcgc ggcgatgtcg atctggctgg ccggctgcct gttcatggcg
     2881 ctgctcaacc gcggtccgcg cggctacgcg ttcctgctgg ccggctacac caccgccttc
     2941 atcggcttcc cggcagtgac ctcgccggag accatcttcg acaccgtggt ggcgcgcagc
     3001 gaggagatca tcctcggcac ggtggtggca gtgctgtttg cttcgctgct gttcccggcc
     3061 tcggtgcggc cgatgctgcg tgcacgcatc ggcacctgga tggaggacgc cgcgcagtgg
     3121 tgccggcaga ttcttgaacg cggccgcgcg cacgcgccac gcaaccggtt ggccgccgac
     3181 ctggtgcagt tcgaggcgtt gattgaattc ctgcgccgcg atgatccgcg ccatgccggt
     3241 tcggcggtgt cgatggagcg cctgcgtgag cgcatgctgc tgctgttgcc ggtgctgtcg
     3301 tcgatcgccg atcggttgag tgcgctgcgc agcgatggcc aggcgctgcc ggagggcctg
     3361 ccggaactga tcgacgacct ccacgactgg ctggacgggc cgaccagcgc cagcgagtac
     3421 gcccgcctgc gcgcgcgcat cagtgcgctg aaaccgcagg tggaccgcga tctgcagcac
     3481 ctgcagctgg ccagcctgct gctgcgcctg gaggaactgg tggacctgtg gcaggactgc
     3541 cgcacgctgc agcatgcgat cgatcatggc accgcaccgc tggaccgcgc gcactaccgc
     3601 atccgcaccg aacgggtggc cgctgacaag cacgtcgact acggcatggc gctgttctcc
     3661 gcgctcagtg ccggcgtggc gctgatgagc tactgcgtgc tgtggatcgc actgggctgg
     3721 gaaggcggcg gcaacggcgc aatgatggcc gcggtgaccg ccgcgttctt cgccgcgcag
     3781 gatgatccgg cgccgagcat ggtgtcgttc ctggtgtggg cgatggtcgc ttcggtggtg
     3841 gccggcgtgt acctgttcgg cgtgttcccg gccgtacatg acttcggcct gctggcgctg
     3901 gtgctggcgg tggtgttcct gccactgggg ctgatgctgc atcacccgaa gagcgcgctg
     3961 ttcgcactgc cgctgacggt gaacctggcc gcgctgctga gcctgcagaa cacctacagc
     4021 gccaacatcc agaccttcct caattcgtcg atcgcgatgt tcatcggcat tggctttgcg
     4081 gtggtgatga cccgcctgtt ccgttcggtg ggtgccgagt ggaccgcacg ccggctggtg
     4141 cggcagggct ggaccacgct ggccgaagcg gccgaaggcc gcggccagca ggaccgccag
     4201 cgttttgccg cgcgcatgct cgacctgctg ggactgctcg caccgcgcct ggcggcgaca
     4261 ccggagggca gcgacatcgc ctcggtggac atgctcaatg aagcgcgcat cggcctgaac
     4321 atcctgcagc tgcgccgcgc ccgcctggaa ctgcctgagc gcagccgcga agcggtcgaa
     4381 cacatcctgg aggagatcgc cgcgcactac cggcggcaga ttgccgcgcg caggccgatg
     4441 gtggccgccg aagcgctgcg cgagcggctg gatacctcac tgggccgggt tggcagcgtg
     4501 gcggcctgca aggcgcgcga cgaggcactg atgggcctga tcggcctgcg cttcgcgctg
     4561 ttcccggagg ccaaggcgct ggcgccgggg tgggcgatga gcacggcgac gcagccctag
     4621 cgcgataccc tgtgcgtcca cagactctgc ccccgctctg cacaggaagc cccaatgagt
     4681 tacgacatga tggtgttcga ggccagcgcc gccccacgcg aggccgcggc tttcatcgcc
     4741 tggttcgaga agcagacgca gtggaacgag cgccacgagt acgatgaccc ggcggtcagc
     4801 agcccagcac tgcaggcgtg gttcgcggag atggcacagg aatttccgcc aatgaacggg
     4861 ccgttgagca atgacgacga tgatcgtgcc gaggtgaccg agtacagcat cggtagtcag
     4921 gtgatctacg gcgcattcgc gtacacggtg gccgagcatg cgcatggccg ggtgcaggat
     4981 ctggccgaga agcacggcgt gggcttcttt gatgtgagcg ccgatgaagc ggcgatcgtt
     5041 ttccccgatg gcctggtact gatcgcgtag atccacgccg aaacgatcga agcgcgcttc
     5101 tgtagagtcg agccatgctc gactccaggg tccatcagcc gagcatggct cggctctaca
     5161 ggaagcgcat cgcgcccgcg tcagaacagc gtgccctgca ccgtgggctg ttcgatgcgc
     5221 gttggttgtt cggccacgtc ttccgcgccc agccgccagg ccagccctcc caaccggctg
     5281 gcatgacgct tcaacgcggc ctgcagcacc tcggcactgc cggccacgtg caggacctgg
     5341 cgggcgcggg tcaggccggt gtagaccagt tcgcgcgaca gcacgcggct gtcctggcgc
     5401 ggcagctgca accacacttc gtcgaactcc gaaccctgcg ccttgtgcac ggtcatcgcg
     5461 aaggcgcttt cgtgcgcggg cagtgcggcc gggtggaagg cgcgtggctg gtcgacggtg
     5521 tcgccgggga accaggccac catcgcgccg ctgccatcgc gcaggcagat gccgatatcg
     5581 ccattgaaca ggcgatgacg gtagctgttc tcggtgacca gcagcagccg gccctggaaa
     5641 tagcccggtg tattgccggc cagcagttgt tcgatgcggc tgttgagccc gcgtgcgccc
     5701 tgcgggcctt cgcgcagtgc ggtcagcacg cgcaggcgtc cggcctgctg cagggccagt
     5761 atcggatcgg cggcatccgc cagcgcacgc cagtggccca gcaggtgctc acgctggcca
     5821 cgcaacggat cggcttcgcc ttcgtggaag tgcacgcccg ccagttcacc gctgcgcagc
     5881 agctgcaatg cggcgctgct gtcgccttcg cgcacggcat gcgccagcgg tgccaggtcc
     5941 agtgcatcac tctgccggta accgcgctgc agctgcacgc ggcgcccggc aaaagcgcgt
     6001 ggtgtggcct gcggctgcaa cgtggccggc gccagcaggc catgcaacgc ctgcgcatcg
     6061 tcggcacggg tgccgatgcc atcgccgctg gcacgcagga tcgcgctgag cacgtcgccg
     6121 gcttccactg acggcagctg gtcggggtcg ccaagcagga tcaaccgggt gccactggcg
     6181 atcgcatcga ccagcttggc catcatcggc agatcgatca tcgaggcttc gtcgaccacc
     6241 accacgtcca ccggcagcgg attgtcggcg tggtggcgga aacgcggtga atcgggaatc
     6301 accccgagca ggcgatgcag ggtggtgccg gtactgggca atgccgcgca cagcgccgga
     6361 tccagccctt gttcctgcag gcgctgcacg gcgacacgca ggctctcggc catgcgctcg
     6421 gcggcgcgac cggtgggcgc ggccagcacg acctcgggcg ccggctggcc ggcctgccgg
     6481 gcctgtgcgg ccagcagcag caacaggcgc gcgatggtgg tggtcttgcc ggtaccgggg
     6541 ccgcctgtga ccagcgccag cggatggcgc agggtcacgc cggccgcgcg cgcctggtga
     6601 tcttcgctgc ccgacgcctg cgggaacaga tgcgcgaaca gtggtgccag cgctgccatg
     6661 tccggcgccg gcagcggatg ccggccaatg cgttgcaggc cggcggccaa ctggcgttcg
     6721 tactcgcggt agcggcgcag gtagagcaat ccgtgttcca gcaccagcgg cgcatcctcg
     6781 gcgatggcat cggcctgctc cggtgtcgcc acccacggcg acgcacgcag ctgcgccagc
     6841 cagtcctgcg cggcaggcca ctcgggcacg ccttccagca accgctgcgg ttgcgtggga
     6901 tcgaacgcgg catggccttg cgataccgcc agcgaggcca acgcggccgc cagcgccacg
     6961 ctctcgggcg tgtcgtcgcg cagtcgttgc aggctggtcg ccaacgcatg gtcgagggtg
     7021 cgcagctggc ccttctggtg cagttccttc agcaggctca tgcgctggct ccacgggcac
     7081 gtgcggccag ttcggcctgg gcctgttcgc caccggcgaa caacgcatcg agggcatcga
     7141 ccagcgccag cgggaagcgg tccacatgca cgccgttgcc ggcggcatcc aggccgcggc
     7201 agaacaggta gcggatgccg cccatgtcgc gctcgtagtc gtaggccgca cccagccgga
     7261 aacgcagcca gcgatgcagc gccaccgtat agatcagcgc ctgcaggtcg tactcgctgt
     7321 ggcgcatggc aatggccagc aggtccgggc tgtagccggg caggcggttg gacttgtagt
     7381 cgagcacgta ccagcgccca tcgcgcacgt aggtgaggtc gatcatgccg gtcatcagcc
     7441 cttccaggcg gcggcgctgg ccaaaaccgc ggcgcgcgct ggaaacccca tgtgcgtgca
     7501 gcacctgcag cagcgccggc accgcggtcg gctcgatggc gaaatggaag tcgatttccg
     7561 cacggcgctc gccttcatcc aggctgtgca gcgcaccgcc ctccggcagc ggcacggtca
     7621 gcgtgtgacc gaccagcggc accagtacgg ccacgccatc cccaaggtcg gcgtcagcgt
     7681 agccctcgtc gtgcagcgcc ttgcgcagta cctcggcctg gccttcaggg gcttccaggc
     7741 ccggtcgcca gccaccccag gcagcgaagt cgacgttctc catcgcttcg tgcagcacgt
     7801 taccgaagcg actgcccatg aagcgcgggt cgaccggtgt actgtcctcg gcggccgcag
     7861 cgggttccgg cagcgccggt tccagcggca gttccgggcc cgcgggttcg tcggcggcgg
     7921 gcgccggcag ctcggtggcg gcggcttcga tgtcactgcc cgcgccagcg tctgcatggg
     7981 ccagctgggt gaagctgtac acccaccagt cgtgcggcac gcgccgggtc agtgcacgca
     8041 cggccggcag ctcaccttcc acttcggccg ccagctgcgg cagtgcggcc ggtgcctcac
     8101 tgtcatcgat gtgcacatcg gcatgcacgc gcagcgcctg caggtcaccc agcagcggcg
     8161 ccagccgcgt ctttgccagc ccggccagat cgcccacggc aatccacagc gcgtgctcgg
     8221 cgcgggtcag gccgacatac agcaggcgcg cgtcctcggc gcgctgctca cgctcacgct
     8281 gggcgctggc cgtttcccag gcctcgtcct tgtccagctt ccagtgcagc tggcgctgcc
     8341 cacccacgtg cacggtacag tgcgaagcgg tgttcggtgc gccgccgtcg atgccgacga
     8401 acggcaggaa caccagcggg tattccaggc ccttgctctt gtgcagggtg atgatctgca
     8461 cgcggcgtgc atccgattcc aggcgcagca gctgctgctc gtcatcctgg tcggcgctgg
     8521 ccatctggcc ctgcagccag tccagcaggc catgcatgcc cagcgcctgc gccgaggctt
     8581 cctgcagcag ttcgcccagc tgcaggtagt tggtcaggcg acgctcgcca tcgatcagcg
     8641 ccagcaggcg ttcgccctgt tcggcacaga catcggcgat caccgcgaac ggtccaccgc
     8701 gctgccagcg ctcgcgccag tgcaacagtt gcgcctggaa cccacgttgc aggtcgccct
     8761 cgcgttccat cgccgcgatc gcactcgccc gctggccaag cagcacggtc gccagcgccg
     8821 cacgcaggcg tccttcatcg gccggttgca gcagtgccag cagcagtgcg cgcagatcac
     8881 gtgcctcgct ggtggcgaac aggctctgct tgcccgccgc cacggcagga ataccgaccg
     8941 ctgccagcgc gcgctgtaca agggtggcct cgcgatgcga gcgcaccagt atcgcgatgt
     9001 cgcccggctg cacggggcgc ccgcgcaaca cggcgttacc ggcgcgcgca tcgaccaggg
     9061 tctggtggat cgcggccacg caggcctggg tcgctgcatc acgcgaggcg tcggcactca
     9121 tcgccttgtc gccgccactg cgcagcacgc gcagggtcag tgccacggcg gcgcggccgt
     9181 cgcgcaggta gtccgcgtcg atgcgcacgc caccggggcg caccggttcg aactggatgt
     9241 cgcgctcgag gaacgcgtct tcgccgccgt tgtcgtacag cgcctgcagg gcacgcagca
     9301 cggccgggcg tgaacggaag ttctggtcca gcaccggcgc ctgctgcgcc acctgcttgg
     9361 ccgtcaggta ggtatggatg tcgccaccgc ggaaaccgta gatcgcctgc ttgggatcgc
     9421 cgatcaggaa cagcgccggc gccaggccca gctcgcgcac ctccggcgaa tcgccgaaca
     9481 cggtgtggaa gatgccccac tggcggtcgt cggtatcctg gaactcatcg accagcgcga
     9541 tgcggtactg cgcgcgcagc tgcctgacca gcgccatgcg ctgcggccct tccagggcca
     9601 gtgccacgcc atcgatcagg tcgtcgtagg tctgcacccg gcgcgtgcgc ttcagcgcct
     9661 gcaggcgctg ggtggcttcg tcgcgcaggc ggtgcaggaa gttcagcgcg gtggcacgca
     9721 gccaggcatc acgctcggcc agcagcgcga catggcgcgc caacggcgcc tgcaatggcg
     9781 acgacggcgt gcgctcggcg aatttcttgt tggtcttggc ggccagcgcc tccggcagca
     9841 gcgccggcag gcgctcgttg gccagcagct cgcgcggatc ggcgcgctcg gcccaggcca
     9901 gcagttgccg gcccagcggg tgcagccagc cctgcttgta ggacacgccg ttgatccact
     9961 tgttgtcgac cgcatcgcag aggtcgatga agaactgctc gccatgctcg cgcagcgcct
    10021 gctgcagttc ggcggcgttg gcctgcaatg ccgggtgtgg atcggccagc gtcaccggcc
    10081 gtggcaacgg gtgcaagggc ggcgcggcca gcagcgcgcg cagatcggcc gccagggcgt
    10141 ccggggtgga ccacagccag gtcagcggct ccagcgtggc cggatcattg gcgtgcacgc
    10201 gccacaggtc ggcggcgagt tcctccagca gctcgcggtc actggccagc aactcgggcg
    10261 ggtcgaaggt atggccgctt tccagcgcat gctcgcgcag cacgcgggtg cagaagccgt
    10321 ggatggtgaa gatcgaagcc agatcgatct cgtcggcggc gacctgcagg cgacgcttca
    10381 gcgcagcggc gctctcggtg tcaccctgca gatggcgctg cagcacttcg cgcgtcaagc
    10441 gcacatccgg cgcctcgccc tcggccggtt ccagatcgac caggcgcgcg gccagcgcca
    10501 gccgctcgcg gatgcgcttg cgcagttcct gggtggcggc gtcggtgaag gtcaccgcca
    10561 ggatctggcc gatgcgcagg ccctgctcca ccaccaggcg ggtaaacagc gtggccaggg
    10621 tgaaggtctt gccggtaccg gcgctggcct cgatcaggcg gatgccctcc agcggcaggg
    10681 ccagataggg gtcgtgaccg gtggcgtcga tgccctcgtc ggcgatggtg ctgttcatgc
    10741 gcggccctcc tggcctgcct cggcgcccag cgtgcggcct tcgcgcaccg cgctgaagac
    10801 cacttggctg ttgcgcagca gatcggcata gccggcatcg gtggcgaacg ggtcggcacc
    10861 gcgcagcagc agctgccagg catcgctgct ggattcaccc cagctgcggt cgctgccatg
    10921 ccactgcttc cagccttcgc tgcgctgttt ttcgccggcc gtgttgtaca gcacccagcc
    10981 ggtatacgga gcgaagcgca gcggctcgcg caggccacgc tggcgcagct gcagcagcgc
    11041 acgcagcgcg gcgcgggcag caggcacgct cagcgccggc agcacatgcg gaccgggtcc
    11101 ggcatcgccg ccatcatgga actgcaccaa cggcagggca tcgccggcgg cgttggccaa
    11161 cagccagtcc aggccctggc ggatcaccgc attgccgttg agggtgccgg cgcgcaggcg
    11221 caccagccct tcgggatgcc gatcggccac ccgtccatgc agccgcacgc cgtcgatatc
    11281 gacttcatac cggcggcttt ccaatggttc gccctgcatc cagcccagca gcgcgctggc
    11341 atacggacgg gtcttcagct gctccacttc gaactggcgc tcacccagtg caccggacgg
    11401 caacagccca cgcgcgcgca accgcggata cagcggctcg ctgtcgccat tgagcgtggc
    11461 ccgtaccacc gccgcctgca cgctgcgctt ttccgggccg cgcgaggaca gcaccagcgg
    11521 ctccaggtca tccacctctt cgacctcgtc ggccaggcgc aggcccagcg actgcgccag
    11581 gaactgcccg gccgggtcac acaggaagcg gcgcagggta tcaagtgcaa cctcgtcctc
    11641 cacggcatcg tcgagcggtg gcggcaacgg cgcgtcgaac cagggcagca ggccgccacg
    11701 ctggccggtg aggcgaccgg ccgccggatg ccattgccgg cgatagctga agcggcgcgg
    11761 atcaccatcg ccgaacgccg ccggtgagaa cggctgcagt gcatggcgca cagtgaagtc
    11821 gcggaccgcc gcaggcggat cgaggtgata cgcggcggcg gcgtcgatca gttcactgac
    11881 cagcaccgac ggctcgcgca cgctgccatc gcggggatcg gcacccaggt agctcagata
    11941 gaacacctcc tgcgccgcgg caaacaactg caggaacagg aagcggtcgt cctcgcgggt
    12001 ggaacggtcg cccgggcggc ggcgcggtgt atccagttcg gcggtgagct ggttgaggcc
    12061 cgcggccggg tcgcggcgcg ggaaatcgcc gtcattcagg cccagcacgc agatcacccg
    12121 gaacggcagc agccgcatcg gcaccatgcg gccgaagctg atgccaccgg tcagcaacgg
    12181 tgcgcgcgta tcggcctcgc ccagtgcccc ggcgaagtgc gcacgcacca cctccggtgg
    12241 cacgccttcg ttgaagccgg ccttggcagc gtcctcggca aactggttga gcagcttgcg
    12301 caggcgctcc agcgcgcgct ggctgttggg cgaactgggc gcggtcggca gcagcgcgtc
    12361 cagcagcgac agcaggcgct gccgccattg cgccggggtc agcagttcgc cgagtcgacg
    12421 ctggtagacc gccagaacgc gcaacaggcg cagcagccgg tccagcgctt ccaacgcacc
    12481 gccctccagc tcgatccatg gcgccacgcc ggccaggtcg gcctcgctgc cggtggcatg
    12541 gccaagcacc agccggtcca gcgcgaactg ccaggtgtag gcatcgtcgg ccggtgcctg
    12601 gtgctggtcg cgatgcttcg cgtccaggcc ccagcgcgca cccgcctgct gcagccaacc
    12661 atgcaggcgg tcgaagtcca ccgcttccag gccggccgct tcggccagcg gtgcgctggc
    12721 cagcaggtcc agcacttcgt tcaggccaaa gcgcgagacc ggcaggccca acagatgcac
    12781 gaacacatcg gccagcggct cgccggccag cgggctgctg tcggccagcg catagggaat
    12841 gtgctcttcc tcgccgccac ggccaccgaa cacggcttcc aggtacggca cgtagggatc
    12901 gatgtccggc gccagcaccg cgatctcgcg tgcctgcagc ggcgggtcga aacgcgcgtc
    12961 ctgcagcagg ctgcgcagct ggtcgtgcag cacctgcagt tcgcgcaggc gggtatggca
    13021 ggcgtgtacc tgcaggctgg ggtcgtcgct gcgcagccca tcgcgcagtt cgcccgaagg
    13081 cagtgcacga cggtggaaca gatcgcgttg caggcgatgc agcaggctgt cggacaggcc
    13141 gccttcgtcc agggtcggcc gggtgtcttc ttccggatcg gaataggcgg cgatctcacc
    13201 ggccgggtgc accacctcgt agctgcccag caccgccatg aagtcgcggc ccgcggcgcc
    13261 ccaggcttcg agcagacggt tctcgccggc ggcctcgcca aacggatccg gcgcgccgct
    13321 gcgaaggcgt tcggccaggg tctgcaggtc gccccagtac gactgcacgg gcgtgggcat
    13381 gtagaaatgc agctcgccca cccgtgcctg ggtggccatc acccgcagca cgtcggggga
    13441 gatgttgagc gtcgcgaacg cggacatgcg cagcggcaag cccttcggca acggctggcc
    13501 cgccccttcg aagcggtcca ggtattcctg gatgcggcgc gcacggtagt cgtggccatg
    13561 ggtgatggtg cgccacagga tcgcctgcgg atcggccgga tcggcaccgg ccgcccagcg
    13621 cagcagccag tcgcggcgcc aggcctggta cttctcgaac accgaggcca gttcgccagc
    13681 cagcgcccac ggcttcaatg cgtcgccacc ggcaaggtag gactgcagcg cgcgcatcgg
    13741 tggctgtgcc agcagcgccg gatcgcgcag tgcctggtac agcttccagt gcaggccggc
    13801 cgcgtccagg tcgtcctgct cgccgctgac gttggccttc agcgcgcggg ccacgaactc
    13861 gcccggggtg aggaattcga ggttggcggc aacaccgaac tcggcggcca gtgtcgcttg
    13921 cagccagcgc cgcatcgcca cctgcgggat cagcaccact tccggtgcca acagcggctg
    13981 gcccgcgacc ggcgcacgca cattgcgcgc cagcagcgcg gccagcacgt ccagggaatt
    14041 ggaatggtag aggcggaaat cgctgcctgg gtcactcatc atgcacagtg tgcaggacgg
    14101 caggcagtat tcaatggtcg gcccgccacc ggtacggatt gttccggggt acgcaccgat
    14161 tgtcccggcc agcgccaagc cttgtcgtgc aacaatactg gaccgtccag tctgcttatg
    14221 ttcagccgac gggcccgatc cttcgatgtc taaaaaacgt taatggtgcc catgtcggct
    14281 tccgcctcca gtctggtgca gttatccaac gtccgcatcg accggagcgg gcgcacgatc
    14341 ctgcgcgatg tgtcgctgca ggtgcccaag ggcagcatca ccgccgtgct gggtccctcc
    14401 ggaagcggca agtcgaccct gctggcggca ttgaccggcg aactgcgccc ggtcgccggc
    14461 gaggtcacgc tgttcggcaa gccgatcccg cacgacagca gcgcgctgct ggaaatgcgc
    14521 aagagcgtgg gcgtgctgct gcagggcaac ggcctgctga ccgacctcac cgtggccgag
    14581 aacgtggcgc tgccgctgcg cacccatacc cgcctgccgg cggtcgtgct gcgccggctg
    14641 gtgcagatga agctgcacgc ggtgggcctg ctggccgccg ccgaggcctg gccgcgcgag
    14701 ctgtccggcg gcatggcgcg ccgcgtggca ctggcccgcg cgctggcact ggacccgccg
    14761 ctgatgatct acgacgagcc gctgaccggg ctggacccga tcgcctcggg ggtgatcatg
    14821 agcctgatcc agcgcctcaa ccacagcctg ggcctgacca gcatcatcgt cagccaccac
    14881 gtgcacgaga ccctgccgat ctgcgaccag gtgatcgcca tcgccaacgg cggcatcgtg
    14941 ttccagggca cgcccgaggc gctgcaatcc agccaggacc cgctgctgcg gcagttcctg
    15001 catggccagc ccgatggccc cattccgttc gatgccgcgc cgcgcgcgag ggtcgcctga
    15061 tgccgttcgt gcaagccacc cgttcgctgg gccgcgccgg cctgttctcg ctgaccgtgc
    15121 tgcgcggttc gctgcccacg cgtgatttcc tggccgagct gacccgcgag atctacaaga
    15181 tcggcgcgcg ctcgctgccg atcatcgccg tcggcggcgc cttcgtcggc ctggtgctga
    15241 ccctgcaggg ctaccgcacg ctgaccacct tcggtgcggc cgacgcgctg tcgaccctgc
    15301 tcggcctgtc gctgtaccgc gaactggcgc cggtgctgac cgcgctgctg ttcatcggtc
    15361 gcgccggcag ttccatcgcc gccgaactgg gcctgatgcg agccaccgac cagatcaagg
    15421 cgctggaact gatggcgatc gatccggtgg ccaaggcggt ggcgccgcgc ttctgggcgg
    15481 cggtgctgac cgtgccgctg ctgaccggca tcttctgctc gctggcgatc agtgccagct
    15541 acttcgaagc ggtgcatgtg ctgggcctgg acaacggcgt gttctggtcg gcgctgcgca
    15601 acagcgtcga tttctgggat gacttcggcg tggcgatgct gaagtcggcg atcttcggcg
    15661 gcaccgccgc gctggtcgcc gcctacgttg gattccacgc cgagccgacc atcgagggca
    15721 cctcggtggc gaccacccgt gcggtggtca acgcctcgct gctggtgctg atgttcaact
    15781 tcgtgttgtc ggcaatgttg ttcacctaac ccctccaccg gcggtgcgca ggcgcgcgcg
    15841 gccactacga ctcgatcagg taatccacat ggccatccgc ggtcccagac tcgaattctc
    15901 cgtcggcgcc ttcctgctgc tggccctggc ctcgctgatg gtgctggccg tggcctcgac
    15961 caaccagcgc tggagctggg gaagccaggg ctacgagctg aaagcacgct tctcccaggt
    16021 cggccagctg cgcaagcagg ccccggtgaa gatcggcggc gtgaccgtcg gccaggtcgc
    16081 ctcgatcgac ctggacccgg tgaagttcga atcgatcgtg accctgcgca tggacagcaa
    16141 ggtcaaggac ctgccggcag acacctcggc cggcatcttc accagtggtt tgctcggcga
    16201 gagctatatc ggtctgcagc cgggcggtga tccggacgtg ctgaaggccg gcgacgagat
    16261 cgtcttcacc cagcccgccg tggacctgat ccagctggtc ggcaagtaca tgttcagtgg
    16321 cggcgccggt ggcggcgctg gccagaagcc caacgatggc gcgcaggcgc ctgcaacgga
    16381 accgcaacca tgaagatgaa actgatcccg gccctgctcg cttcggcgct gctggcagct
    16441 actccgttcc tcgcccaggc ccaggccgcc gcccccgccg cagccgcgac ccagggccag
    16501 gccggcaagg tggtgatcga tgccagcacg cgcatcctca ccaccctgca gcagcgccgg
    16561 agcgagttca gcagcaaccc ggccagcctg cgcagctaca tcgacagcga actgaaccgc
    16621 accttcgacc gcgactatgc cgcgcgcctg gtgctgggcc cgcacgcccg cggcgcttcg
    16681 gatgccgaca tcaagctgtt cgccgatgcc atggccgaca gcctgatgca gcgctacggc
    16741 tcgaccctgc tcaacatcca gggcaagccg agcttccgcc tgaagggcga gagcccgctg
    16801 ccgggcaacc gcggcgtgcg cgtcagcacc gaactggtgc gtgccggcag cgagccgacc
    16861 ccggtcgagt actggatgcg caacgtcaac ggccagtgga agatcttcga cgtcaacatc
    16921 gaaggcatct cctacgtgca gaccttccgc aaccagttcg acaccccgct gcgccagaag
    16981 ggcatcaagc aggtggccag cgaactgcac agcggcagca tgcaggccgg gcccgcgggc
    17041 aatggcaagt aacgcactgg cactgctgga aggcgacacc ctgcgcctgc gcggggtgct
    17101 ggatcgtgcc gcagtgatcg cactgtggcc gcagctgcag gcgctgcccg cccagctggc
    17161 acggctggag ctgggcgagg tcgagcgcgt ggacagcgcc ggcctggccc tgctggccga
    17221 actggcggca cgtgcacgca aggccggcca cccgctggcg atttccggcg cgccggccgg
    17281 ctacaacgaa ctgagcgcgg cctaccggct gtcgcccgac ctggatttca acgctacttc
    17341 tgctgcgagc tgacatgaac gtcgtacgca ctctccccct gatcgtcctg gccaccgccc
    17401 tgaccgcctg cgccggcaag cccgcgcgca gcgatgcacc ggtggccagc accgtggttc
    17461 cggccaatgc cgctgccgaa gcccccgctg cagttgccga tggcggaacg gtcgaccctg
    17521 ccgtggccgc tccggcggcg caggcgccgg ttgccacggc cccatcgccg gccactccgg
    17581 cagcgcccgt tgatggcaat gcagcgaaca ccgcagcagc caccgcaccc ggcggcgacg
    17641 atgatttcga cgccctctat ggcggcgccg gcaataccac caacgcggcg gcctacgatc
    17701 cgtgggaacc gttcaaccgc aaggtgcata ccttcaacaa cgcggtcgac cgcggcatcg
    17761 cccgtccgct ggcgaccgcc tatacccatg tggtgccgcg cttcgcccgt accggcgtca
    17821 gcaacttctt cagcaacctg cgtgcgccgg tgaccatcac caaccagctg ctgcagggcc
    17881 gcggcgccga tgcatgggac agcctgggcc gattcctgat gaacagcacg ctgggcatcg
    17941 gcggcctgtt cgatccggcc agcaaggcga tggtgccgcg tcgcaatgaa gacttcggcc
    18001 agaccctggg cgtgtggggc tggcgtcgct cgcggtacgt ggaactgccg ttcttcggcc
    18061 cgcgtaccgt gcgtgatgtg ttcggcctgg ccggtgacat cccgctgtcg ccgatccgcc
    18121 gcatcgaaga agacaaggtc cgcatcggcc tgcagggcct gcagctggtc gacacccgcg
    18181 cgcagctgct ggcgatcgac gacctgcgcg acaccgcggt ggacgagtac tcgctggtcc
    18241 gcgatgcgtg gatgcagcgc cgcaactacc agatcgagaa cgacctgcgc agcaagcgcg
    18301 accgtggcca cgacgatgcc aattcgccga tcccggtcga tgcaatgccg atgccgcagt
    18361 ggacccactg agtcgtttca tcggcgcatg aaaaaccccg cctcggcggg gtttttcttt
    18421 tccggcgacg tttctttccg gtaggtgcca accttggttg gcacgcttcc tcaagccgcc
    18481 agcgccgcct cgatggcctc gcgcaggcgc gcatcgtcgg cggccacgtc cggggcgaaa
    18541 cgcgcgacga ccttgccgtc gcggccgacc aggaacttct cgaagttcca cagcaccgcc
    18601 ggtgccggat ggatcgggat ttccttgctg gccaggcgct cgcgcaacgg gccttcaccg
    18661 atcgactgcg gctgcgcggc agtcagctgc tggtacagcg ggtgggtgtc gtcaccggcc
    18721 acgctgatct tggagaacat cgggaagctg acatcgtagg tgagctggca gaactgctgg
    18781 atctcggcat cgctgcccgg ttcctggcca aggaagttgt tggcggggaa gcccagcact
    18841 tccaggccct gcgcgtgctt ttccgcatac agcgcctgca ggccttcgta ctgcggggtc
    18901 aggccgcact tggaggcgac gttgaccagc agcagcacct tgccccggta gtcggcaagc
    18961 gaggacggct ggccgtcgat ggtggtgagg gaaatgtcct ggattgaagt gctcacgcgg
    19021 gggctccggc tacagcgggg aatggcccac cagcatagcg ccgcgcgatg ccggtagtgc
    19081 cggccgctgg ccggcagttc cgtcagtcca cgcagatcgt gccctgcgcc ttgccgtcct
    19141 cgatgcgctg gcggcaacca aagttctggc tggcatcacg ctggcaggta ccggtggtgg
    19201 cgctgccagc ggccgcctcc cccccggcca ggcactggcc ggtgcagtcg ctcttgccgc
    19261 tgcaggcctt gccggcatcg gcatagggaa tcacgcactg ctcgcgctgc aggcggccca
    19321 gccgctgcag ggtgccgccg gcggcctggc agtcgacgtc gcgtgcttcg cggtaggcct
    19381 cggtggcttc gggcgtggcg gccacgccgg cctgccccgc cgtggccacg gccggtggtg
    19441 cgctgctgca ggcggcaagc agcacggtca ggacaaggct ggtatagaag cgcaggcgca
    19501 tggcgatacc tgatcgaaac ggacaggccg ccagcatacg catcgacgat gcaggcggcg
    19561 tgtcagcgcg gctcaggcct cctcgccgtc gctgccctcg tcctcggcct ctcccgtggc
    19621 gtccccctcg gccaggtcgc ccagcagcga ctgcgcctgt tcggcagcca gcgattccac
    19681 gccgcgcagg cggcgctcga tggtgcgcgt cttgcggctg gcctcgccga tgctgcggcc
    19741 gacggtggtg atctgctttt cggccttctc gaggatgccg gcgaacttgc cgaactcgct
    19801 cttcaccgcg cccagcaggc tccacacctc gctggagcgc tgttcgatgg ccagcgtgcg
    19861 gaaacccatc tgcaggctgt tgagcagcgc ggtgaccgtg gtcggcccgg ccaccaccac
    19921 gcgatgctcg cgctgcagca ggtcgaccag ccccgggcgc cggatcacct cggcatacag
    19981 gccttcggtg ggcaggaaca tcaccgcgaa gtcggtggtg tgcggcggcg cgatgtactt
    20041 gtcgcagatc gacttggcct gcacgcgcac cgcgcgttcc agctggatgc cctgcaggcg
    20101 cacgccctcg gcatcgccct gctcctgcgc atcgagcaga cgttcgtagt cctcgcgcgg
    20161 gaacttggag tcgatcggca gccacaccgg cgtgtcgtcg ctgctgcgcc ccggcaggcg
    20221 caccgcgata tcgaccattt caccgctgtc cggacgcact ttcaccgcac gcgcgtactg
    20281 ctcctgggtc aaggtctgct cgaggatgtt ctccagctgc acttcgcccc agctgccgcg
    20341 gttcttgacg ttggtcagca cgcgcttgag gtcgcccacg ccggtggcca gctgctgcat
    20401 ctcgccaagg ccgcgctgca cctgttccag ccgttcggaa accagcttga acgagttgcc
    20461 cagccgcgtt tccagcgtcg actgcagctt ctcatcgacg gtgtggcgca tctgctccag
    20521 cttctgcgcg ttgtcgttct gcagcgcgcg cagctgttct tccagcgtgg tgcgcatctc
    20581 ggcgatgcgc tgctcgttgc gctgggtcag ttcctgcagg cgcaggccca ggctctcggt
    20641 caggcgctgc tgcgactgcg cgccttcctc acggcccttg cgcgcgtcgt ccaccagggt
    20701 ctggcgcagt gcaccgagct gggtatcggt gcgcgcggtg agctcctgca actgctggcc
    20761 gaaggcgtgg atgcgtgcct cctgctgctg gccaaaggtt tccagctggc cgcgcagttc
    20821 ctgcaggcgc tgccccatca gcgccgcgcc acgctgctgg ctgtcggcgg cctcggcgcg
    20881 cgccttgcgg gcgtcttcgc cgagcgcttc gcgcagcagg tccaggcgct ggtcggtgcg
    20941 ggtcgacagg tcggtcagcg cgcgggcgaa gccatcgagc tgctcgcgca gttcgctgcg
    21001 cccggagcgg gcctcctcgc gtacggcctg ttccaggcgg tcatgcggcg ggcggcgcag
    21061 cagggcgacc agctgcagga tgagcacggc caatagaagg gcgccgatga gcaggaattc
    21121 ggtttgcatg tggcaagtgt aggctggccg agtctcagcc gctgcgtcag gaccatgctc
    21181 gctctgtacg gaaagcccac ctcgatcaat gtccgcaagg tcctgtggct gtgcgccggg
    21241 cttgacctgc cgctgcatca cgaaccggcg ccggcgccgg acctgctggc cacgctgaac
    21301 ccgaaccggc aggtaccggt actgcgcgac ggcggtttct tgctgtggga gtccaacagc
    21361 atctgccgtt acctggccac acgcgccggg cgcgacgacc tgctgcccgc caccgctcag
    21421 gcgcgggccc gcgtcgagca atggatggac tggcaggcca gcgacctcaa cagcgcctgg
    21481 cgccacgtgt tcatggcccg ggtgcggcaa cacccggact acccggatga tgcccgcgcc
    21541 gaggccagcc tggtgcagtg gaatcgattg atgggcgtgc ttgatgcgca gctcgccgct
    21601 acgaacagct acgtggcggg caacaccttc accctcgccg atgtcgtgct gggcctgtcg
    21661 acccagcgct ggcgcagcac gcccggcagc acgcctgcgc tgccgaacgt gggggcctgg
    21721 ttcgaacgcc tgcgccagca acccggtttt gccgaacacg tcgacaacgg cgtggcctga
    21781 ggcagggatc tgaccccaag ggcgcgggaa cgacccggcc ttaccagcct tccagcacga
    21841 tcttgccctt ggcgcggtgg ctctccagca gtgcatgcgc gcgccgcagg ttggccgcgt
    21901 cgatgcgccc gaagtgctca cccaacgtgg tctgcagcac gccggcgtcg atcagctcgg
    21961 ccacccggtt caacaggtcg tgctggcgct gcatgtccgc ggtcttgtac agcgggcggg
    22021 tgaacatcga ttcccagtgc agcgacagcg ccttgcgctt gagcgccatc acatccaccg
    22081 ggcccgggtc gtcgatcagg ccgaactggc cctgcggcgc cagcagttcc acgatctgtg
    22141 cgtagtgctg gtcggagtgg gtcaggctgg ctacgtgctg tacctcgctg atgcccagcc
    22201 gcgccaggcc ctcggccagc ggcaggctgt ggtcgatcac atggtgcgcg cccatggcgt
    22261 acacccagtc ctgggtatcc gggcgcgagg cggtgccgat caccgtcagc ttggtcagct
    22321 tccgcgccag ctgcaccagg atcgatccga cgccaccggc agcgccgatc accagcaggg
    22381 tctggccttc accgccgccc tcggcgatgc gcaggcggtc gaacagcagt tcccaggcgg
    22441 tgatcgcggt caacggcagc gccgcggcgg cggcatcgcc gagactggcc ggcttgcggc
    22501 cgacgctgcg ctcgtccacc agctggtact ccgcattgct gccggggcgg tcgatcacgc
    22561 cggcgtagta gaccgcatcg ccaggctgga acagggtcac ctcgctgccc accgcgtcga
    22621 cgatgccgac cgcatcccaa ccgagcacgc gcgggccatc ggtggccacg ccgcggcgca
    22681 ccttggtgtc gaccggattg accgccaccg cgcgcacggc gacgcgcagg tcacgcgggc
    22741 cgggctgcgg cagctccagt tcgatatcga tcagggcctg ggcatcatcg atcggcaggc
    22801 cggcttgggt gtaggcaatg gcgcgcatgg cagcggtcca gtggggaagg aggcgacagg
    22861 ttgcgccgcg cgcgctcccg cagaaaggcg cagaatcggg cagcactttc actccggcaa
    22921 tgaaaatgat ccgtttcgac gacctgcagt tgttcgtccg cacggctgcg ctgggcagct
    22981 tctcgcaggc cgcgcgcgag gccgatctgc tgcccggcca ggtcgcggcc gccgtggcgc
    23041 ggctggagcg cgagctggac ctgcgcctgt tcgtgcgcac cacccgcagc ctgcgcctga
    23101 ccggcgaggg tgcgctgtac ctgccgtatg cgcaggaggt gctggccacc ctgcgcgagg
    23161 gccaggcgcg cgtgcagggc gaggacaccg agctgcacgg caccctgcag ctgtcggcgc
    23221 cgtcggactt cggccgcaac ctgctgctgc cgtggctgag cgccttccgc gccgcgcatc
    23281 cgcggctgcg gctgcacctg cgcctgtccg acgaagtcgc tgatgtgttc cgcgatcccg
    23341 tcgacgtagc gatccgcatc ggccacttcg acgacgccaa ctacgtcgcg ctgcccctgc
    23401 tggaaggcaa ccggcgtgtg ctcgcggcct cgcccgacta cctgcagcgg cgcggcacac
    23461 ccggccgtct ggaggacctg cgtgagcatg attgcctggt ctatcagctc agtggccgcg
    23521 cctacgatcg ctggtcattc gacgtcgaag ggcgccgcag cgtgattccg gtgcgcggtc
    23581 cgctggtctg cgacgacgcc gatgtggtgc ggcgctgggc cgtggccggc gaaggcatca
    23641 cctacaagtc ctggctggac ctgcgcgagg atgtgcaggc cgggcgcctg cagctgctgc
    23701 tcgacggcgt tggcagcagc attccgctgc agctggtgtg cccgcatcgc aagcagttct
    23761 cgccggcggt gcggcagctg cacgcgcagc tgcgccagca cctgcaaccg ctgctgtctg
    23821 gcatgcccgg cggccccgcc agccctctgt cgccaagcgc ggcgctggcc gacaatggcg
    23881 gccccccgta acaagagaac accgccatgc cgtggatggg catccaggac ctgtggacgt
    23941 ttctggtcgc cgtgctggtg ttcctcgccc tgcccggccc cggtaccttc accctgctga
    24001 ccgccaccgg ccgtggcggc gtgcgtggcg gctacaccgc attggccggc ctgctggtcg
    24061 gcgaccagat cctgatgtgg ctggccctgg ccggcgtggc cgcactgctg aaggccaatc
    24121 cgctggtgtt ccatgccgtg cagtacctcg gtgcggccta cctggtgtgg gtcggcatca
    24181 gcctgctgcg gaccccgaag cacgatgggg gtgacgccgg gccgatccgc atgcagccgg
    24241 gccgctactt ccagcaggcc attctggtca gcctgctcaa tccgaaggcg atcctgttct
    24301 acatggcgtt cctgccgctg ttcatcgacc cgaaggcgca ccagggcatc gccaccttcg
    24361 cggcactggc cggcatcatc ctggtggtca gcatcgccta ctgctcgatg ctcatcggcg
    24421 tgggcaacct ggcccgtcgc cgcctgatcc agcacccacg gatcagcgat gcgctgcgcc
    24481 gcgtggccgg cctgttcctg gtggggttcg gtatccgcct ggggctgaat ggttgaaccg
    24541 gccgacccgt tgaccccact gcgctggacg cccgcccgct gaatcggctc tgccgaccgg
    24601 agggccctcg gacgaattcg atttttgccc gcaattgtgc tgatttcgtc acttcagctg
    24661 atggcgagcc accatcgctg acgcattcaa cacatgcacg acccccgtca gtggtaatgc
    24721 tgcgctgcgt tcggtcacac tcgggaactt gtcgttctta gtcacccctt ccgaggcctg
    24781 catgtccctg ttccggcgca agtccctaga ttccgtcacc gtccacgaag ccggcaggcg
    24841 tctgatcccc acgctcagct ggccacacct gatcgcgctg ggcatcggcg ccatcgtcgg
    24901 taccggcatc tacacgctga tcggcgtcgg cgccaacctg gccggcccgg ccgtgctgat
    24961 ctccttcgcc atcgccggcg cggtctgcgc ctgcgcggcg ctgtcctatg ccgagctgtc
    25021 gacgatgatg ccggccgccg gcagcgccta cacctacagc tacagtgcgc tgggcgaggt
    25081 attcgcctgg gtggtgggct ggagcctgat cctggagtac tcgctggtgg tgagtacggt
    25141 agcggtgggc tggtccggct acttcgtcgg cttcctggaa tgggtgcaca cccagttcgg
    25201 ctggaacgtg cacctgccgg cctggcttgc cgccggcccg cacgtggaag gcggcatgat
    25261 caacctgccg gcgatcgtca tcacctggct ggtggccggc atgctgatgg ccggcaccaa
    25321 ggagagcgcc accctcaacg ccatcctggt ggtgttcaag ctgatcgcgc tggccatctt
    25381 cgtcgccgtc gccctgcccg ccttcgacag cgccaacctg cagccgttca tgccgtatgg
    25441 cttcgccaag tcgatcggcc ccgatggcgt cgagcacggc gtgatggccg cggcggcaat
    25501 catcttcttc gccttctacg gcttcgatgc gatctccacc gccgccgagg aaaccaagaa
    25561 cccgggccgc gacctgtcga tcggcatcat cggttcgatg atcggctgca ccatcgtcta
    25621 cgtgctggtg gcgctggcgg cagtcggtgc gatgagctac gcggtattcg gccacagcgc
    25681 cgagccgctg gccctgatca tgcgccagct gggccacccg accgcggcga tggtgatcgg
    25741 cgtgatcgcg atcatcgccc tgccgaccgt gctgctggcc ttcctgtatg gccagagccg
    25801 catcttcttc gtgatgagcc gcgatggcct gctgccgcgt ggcctgtcca aggtcaacgc
    25861 ccgtaccggc acgccggtgg cgaccacgct gttcaccgca gtggtggtgt cggcgctggc
    25921 cggtgtggcg cgcctggacg agatcgcagc gctggccaac gccggcaccc tggccgcgtt
    25981 caccgcggtg ggcatctgcc tggtggtgct gcgcctgcgc gaaccgaacc gcgagcgcac
    26041 cttccgcacc ccgctggcct tcgtggtcgg cccgctggcg gcactgggct gcatctacct
    26101 gttcatcagc ctgccgcacc gcacccagct gtacttcctg ctgtggaacg tggccggcct
    26161 ggtgctgtac ttcctgtaca gccgtcgcca tgcgctgatc gcgaaa
//
LOCUS       DAOKIP010000038        26071 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.038,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000038 DAOKIP010000000
VERSION     DAOKIP010000038.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 26071)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 26071)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..26071
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.038"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(6..773)
                     /locus_tag="QEL58_001372"
     CDS             complement(6..773)
                     /locus_tag="QEL58_001372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004152819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase"
                     /protein_id="HDS1675857.1"
                     /translation="MIANTAAYHFALIDAPQVLCDQLLARAEAAGLRGTILVAGEGLN
                     LFLAGAPKSVEGFYAALHADARFADMRVKTSLSEHQPFARLKAKVKDEIISFRRDDGQ
                     PLEYPRAPAVDPATVQRWLRQGHDDVGKPVVMLDTRNLQEVEYGTFKDALVLPIHKFT
                     DLPEALAPHREALKGSTVVSFCTGGIRCEKAALWMVNDGMDNVLQLDGGILGYFEDVG
                     GEGYEGRCFVFDERVALDAELKPMVDQPLPEPRPSAF"
     gene            complement(1045..1410)
                     /locus_tag="QEL58_001373"
     CDS             complement(1045..1410)
                     /locus_tag="QEL58_001373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019301518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675858.1"
                     /translation="MAKLLLNLRNVGDDEYADVCTLLDQHGIAWYRTEPSPWGISNGG
                     LWLREDADHPRAKALMAEYQAARGERVRAEREQALRDGTAETFGSLLRRRPVFVVLVL
                     LGMAGAAALVLLPFMLLRG"
     gene            1481..1915
                     /locus_tag="QEL58_001374"
     CDS             1481..1915
                     /locus_tag="QEL58_001374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014646684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HDS1675859.1"
                     /translation="MRRLLLPLLLSLAAAGCSTGPSGPPPGGTLTTFERIDSVPGTGA
                     EAVAGSKVTVHYTGWIYDNRTETKHGKTFDSSVSRGEPFTFALGAGQVIRGWDEGVAG
                     MKVGGKRTLMIPPDYGYGDRRVGPIPAGSSLVFDVELLDVKP"
     gene            1902..3149
                     /locus_tag="QEL58_001375"
     CDS             1902..3149
                     /locus_tag="QEL58_001375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005408985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03862 family flavoprotein"
                     /protein_id="HDS1675860.1"
                     /translation="MSNRNTAAQCRVAVIGGGPAGLFAAERLRAAGLDVDLYEAKGSP
                     GRKFLIAGKGGLNLTHSDPRPLFDSRYREQAAAVGQWLDGFDAQALRDWAAGFGVETY
                     VGSSGRVFPVDRKAAPLLRGWVRRLKEQGVRLHANHRWIGWNDDGALRFATEAGEIDV
                     HADATVLAMGGGSWPQLGSDGAWVAPLQARGVDIAPLQSANCGFDVDWTPFFAQRNAG
                     APLKPVVAHWIDLAGQPQSLQGECVASEYGIEGSLIYALAADLRENINRDGHAMLWLD
                     LVPGRDAARLLADLSRPRKGRSFGEHLRRQAGLDAVKAALVFEILGKEAGNDLPAVAS
                     TLKRLPLRLLRPRPMAEVISTAGGVRLDALDDGLMLRALPGVFCAGEMLDWEAPTGGY
                     LLTACYASGLRAAEGVIGWLAGR"
     gene            complement(3242..3703)
                     /locus_tag="QEL58_001376"
     CDS             complement(3242..3703)
                     /locus_tag="QEL58_001376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008268138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDS1675861.1"
                     /translation="MQFRTGTADDVATLWALRTRCVRETCSSHYPPEVIAPWSASPPP
                     SQYARLLGQGGCVVVEDAQGALLGFGVFDTDANEIDALFVDPDRGGKGIGQALMQRLL
                     AMADRERDVVLSASLNAVPFYQRQGFIAEREEAYPHPSGVALASVSMRRPW"
     gene            complement(3788..5410)
                     /locus_tag="QEL58_001377"
     CDS             complement(3788..5410)
                     /locus_tag="QEL58_001377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FMN-binding glutamate synthase family protein"
                     /protein_id="HDS1675862.1"
                     /translation="MHRYIVYLLAILMFPICLWLATIWPAWYWGVGLTAAMVALGTWD
                     LLQKRSTLRRNYPVMAHFRYGLESIGPEIRQYFVQSDLEDVPFSRQQRALIYQRAKNE
                     MDTVPFGTLRSTYAVDYEWINHSLAPTSIAKHDFRVLIGANCAKPYSASVFNISAMSF
                     GSLSANAIRALNEGARRGGFYHDTGEGSISPYHREMGGDLVWEIGSGYFGCRDEKGAF
                     SEERFVANATHDQVRMIEIKLSQGAKPGHGGVLPAPKVTAEISVTRGVPMGVDCVSPS
                     RHSAFSTPVELLQFVARLRGLSGGKPVGFKLAIGHPWEWFGIAKAMQETGLLPDFIVV
                     DGAEGGTGAAPAEFVDHVGVPMHEALLLVHNTLVGLDLRERIRIGAAGKITSAFDIAR
                     TIALGADWCNAGRGFMFALGCIQSLSCHTDKCPTGIATQNPARWKHLDAPDKATRVHS
                     YHEHTLHALKELLCAAGLNDPAELGPEHILRRVSPVEIRSLASLYRYLEPGELLHKVP
                     DHAVFHAFWADARSDSFQPPPKIQALRASKSR"
     gene            complement(5587..6021)
                     /locus_tag="QEL58_001378"
     CDS             complement(5587..6021)
                     /locus_tag="QEL58_001378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008267235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BLUF domain-containing protein"
                     /protein_id="HDS1675863.1"
                     /translation="MSLHAIAYASEARADLQTTDLDRLLADATAFNRVAGVTGVLMFD
                     GTRFLQYLEGPEDGIDSVFQRIVNARSHGQVKMLCRAPVLQRAFPRWSMGTRRIEADL
                     LAQIVEAAWPGFLLGSGGFERLLQAWTGADGELEPAAVALGS"
     gene            6153..6239
                     /locus_tag="QEL58_001379"
     tRNA            6153..6239
                     /locus_tag="QEL58_001379"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:6187..6189,aa:Leu,seq:taa)
     gene            6296..6763
                     /locus_tag="QEL58_001380"
     CDS             6296..6763
                     /locus_tag="QEL58_001380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675864.1"
                     /translation="MKLSALMLALLCTASLPALAQSHFDTRRNRDGSMDIRHSDGSST
                     RITRDLSKRVIAEHSNGSRSVTTTDLSGRKRTTYSDGSYSDTTTDLSGRIITQYSNGA
                     RSTSTRDLSGRWRTEYSDGSYSTSVQDLSGNWRTTASGGMAARHPERGFGKKR"
     gene            complement(6768..8177)
                     /gene="hemN"
                     /locus_tag="QEL58_001381"
     CDS             complement(6768..8177)
                     /gene="hemN"
                     /locus_tag="QEL58_001381"
                     /EC_number="1.3.98.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004152795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-independent coproporphyrinogen III
                     oxidase"
                     /protein_id="HDS1675865.1"
                     /translation="MDTFSPAAGGLAWTFDPDLLRRHDRPGPRYTSYPTAPHFHDGFD
                     APALRQAIADSNQLARALSLYVHVPFCSSPCFYCGCNRVITRDRGRGHSYVSRVLAEA
                     DLLAPQFEDGREVIQLHLGGGTPNFLEAEAMTALVEGLRRRFDFSDSPQRDFSIELDP
                     RFIDTHDVAMLARLGFNRASLGVQDFDPHVQESINRIQGVQQTLDILQACRDSGMRSV
                     NVDLIYGLPGQSLEGFGRTLERVLALRPDRLAVYGYAHLPHLFRAQKQIDERRLPSPE
                     DKLALLGLAVEKLSAAGYQYIGMDHFALPEEDLSRAQRAGQLHRNFMGYTTHADTDLL
                     GLGVSAISHIGATYSQNPRDLPSWEDAVDQGQLPVWRGVALSADDQLRAELIQQLMCQ
                     GEVDGAVLGQRHGVDFERYFAEDLRSVQRLQEDGLAEYREGVVRASEPGRPLLRLLAM
                     CFDPYLRAAHEQPRYSRAI"
     gene            complement(8222..8662)
                     /locus_tag="QEL58_001382"
     CDS             complement(8222..8662)
                     /locus_tag="QEL58_001382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012479715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="group III truncated hemoglobin"
                     /protein_id="HDS1675866.1"
                     /translation="MNATPPPVLPVASPELCTEQDVTRLVHDFYARVREEERLGPVFE
                     AHVHDWPEHLAQLVDFWSAMLRATRRFKGSPMSKHMAIELDKDLFDRWLVLFRITTAE
                     CNNPPMQALANDVAARIGDTFWKRYQMLRWPQVGLPVLGIPAKD"
     gene            8841..9128
                     /locus_tag="QEL58_001383"
     CDS             8841..9128
                     /locus_tag="QEL58_001383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014036651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675867.1"
                     /translation="MNRPSLSRRQQLIQHWGAILWPSFIAAGVASMVFFAFVDPLRLQ
                     AISFPGTTISRELGYTAGFFMFWTVTALSSAVTWYLQRPMPSDDDDELPLG"
     gene            9125..10174
                     /locus_tag="QEL58_001384"
     CDS             9125..10174
                     /locus_tag="QEL58_001384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S binding protein"
                     /protein_id="HDS1675868.1"
                     /translation="MSTPCPTTPRPRHWRGILSAGLLALFYALPWLRWDGHQAVLLDI
                     NARRFDLFGWTLWPGDVGVLIGLLAVLAVSLALLTHLAGRIWCGHACPQTLWRGAFDW
                     IGHTVSRALPPALARPATQLAWGLLSLWTGITFVGLFSPIAGLVAAAPHAAWSGWETF
                     WVLFYAAATWGNAGFLREQVCRSLCPFARLQPLLTDPHTPRVLYDARRGEPRGPRPSG
                     LGGVLGRGRGLLDPTTAQDYVFRAAHPLLAGPMPTFSADRLGDCTDCAACVSACPMQL
                     DIRQGPQADCLACGACLEACAQHQHRAGFGRGLLRYCSPQVMTGQPRRWWRPRTLALL
                     SLLLALLACGGWRLL"
     gene            complement(10176..10412)
                     /locus_tag="QEL58_001385"
     CDS             complement(10176..10412)
                     /locus_tag="QEL58_001385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005408923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675869.1"
                     /translation="MEYGMHGLAERVRRELEASYHKHGCGPAFWDTYQQVLDRLVPQG
                     TERTEVTNEMALIIEQLGIVRRAQLVPPHADGPR"
     gene            11087..11488
                     /locus_tag="QEL58_001386"
     CDS             11087..11488
                     /locus_tag="QEL58_001386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019658973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HDS1675870.1"
                     /translation="MKKAGHPRPADLARAAKSTTATISNWLNDHVSASHVKAAQLFRI
                     ADAAKLDARELLYGVTGRGVGEPGNAYIPSQAHLDVWQDAYELVSHLVAENGLEIDHR
                     RHAALDLLAFELLMDGFSRSKVARVLTTSMT"
     gene            11656..12048
                     /gene="crcB"
                     /locus_tag="QEL58_001387"
     CDS             11656..12048
                     /gene="crcB"
                     /locus_tag="QEL58_001387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fluoride efflux transporter CrcB"
                     /protein_id="HDS1675871.1"
                     /translation="MQALNNYFLVFIGGGLGACLRHACNLIGARVAVGSPWPWSTFLI
                     NISGALLMGVVVEAFALRNGASPQLRLLLATGILGGYTTFSTYALEIGLLLQRGQHGL
                     AALYAGGSVALGLAGLFGGMKLARLVLG"
     gene            complement(12052..12885)
                     /locus_tag="QEL58_001388"
     CDS             complement(12052..12885)
                     /locus_tag="QEL58_001388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005408919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HDS1675872.1"
                     /translation="MVDRLAILLERFAVTASVFHAGALCGINTLEGEDEAGQLHLVRR
                     GPLQVSHGQQTVQVEAPSLLLYPRPMPHRFITDPQLGADMACANLHFEGGRLNPISAA
                     LPDFICLPLADLYGGHAALELLFEEAFEQRCGRAAMVNRLFEVVMIQVLRQLMEGGEM
                     RGGLFAGLGHPRLRLALVAMHAAPAQAWTLEDLADVAGMSRSVFAASFREAMGTTPGH
                     YLQGWRVGLAQQALRQGRPLKRIADDVGYGSEAALSRAFKAHTGQSPREWRVQARASA
                     A"
     gene            13107..14183
                     /locus_tag="QEL58_001389"
     CDS             13107..14183
                     /locus_tag="QEL58_001389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005412838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675873.1"
                     /translation="MRCLLRCAFALGLLLPSTSLLAAPATAPRALSGELQGAPWRLDV
                     PASWNGDLVMLAHGYEPVGVPRTTPMAANDSTATLLAAGYAVAQSAYSSQGWAVANAI
                     TDMERLRQHALDELKRVRHTWLLGFSMGGAVAIASLERYPQHYAGGASLCGANLSGEQ
                     IAADLLTTLVAFDYFFPEAEGLPAAGLASAEAAVLPQATLYQGIANALQRNPEHAAVL
                     ARQLQVSTDALAGTISLHALVLHELATRSGGMPVGNRGVVYRGFGDDTAFNAGVQRVD
                     AVPAAQADVRATLALSGALKRPLVIQFNHNDPTIVPRMQAVYPQLAARAGARPLPRVL
                     PAAGEGHCGFSEAEVVEALKAAQR"
     gene            14274..14474
                     /locus_tag="QEL58_001390"
     CDS             14274..14474
                     /locus_tag="QEL58_001390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675874.1"
                     /translation="MIKTTLKTVMFLGMAVTGLAFAADSCDFCTLKYEQCLRATHGPL
                     GKTSEQCDAEYRLCREMDCPSP"
     gene            14593..15357
                     /locus_tag="QEL58_001391"
     CDS             14593..15357
                     /locus_tag="QEL58_001391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014036640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HDS1675875.1"
                     /translation="MAFFKRLSETRYLPTEHTGGAWNIREQHIAPAIGLLAHHLERDA
                     AARGHGFLIARLSYDILGTIPIEAMEADVQVLRSGRTIELVEATLRHDDRPALRARAW
                     LMRPNDTEAIAGTPIPGITPPESMPAWDPGTVWPGGFIQSIEIRRHDQGPGRATYWAR
                     ATQPLLDSETVSPLARAATLFDLSNGMAVRADPKEVAFPNLDLTAHLFGVPEGEWLGF
                     DTSVSFGRQGIGLTSTVLHDARGPIGTLGQALTVRP"
     gene            complement(15373..15642)
                     /locus_tag="QEL58_001392"
     CDS             complement(15373..15642)
                     /locus_tag="QEL58_001392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008267735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675876.1"
                     /translation="MSKSAAEVRWLTFRLMNGQSIGPDRLKDGWVIASETRHCGVRRE
                     AIEGAGVVYALYAPANLASPRRAEMRMREFLMSSGYTFTMGTLGG"
     gene            complement(15768..16472)
                     /locus_tag="QEL58_001393"
     CDS             complement(15768..16472)
                     /locus_tag="QEL58_001393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014036638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HDS1675877.1"
                     /translation="MVHTSGSLVSVGALVGDQARATMLLQLMDGRAYTAMELARVAGV
                     TPQTASTHLRRLIEGDLLVAIPQGRHRYHRLASTEVADMLEGILRVAGRTPSYTAAAS
                     RSMPALREARSCYRHLAGVHAVAITERLLQAGHLLPRDGYWQVTLEGAEFLKALGQPL
                     AEVLQRPATSKPARYCRGCLDCTERRPHLAGLVGEAMLDSFVKNDWLRRVEGRRELRL
                     TPTGREALWKRFGLAT"
     gene            16579..17220
                     /locus_tag="QEL58_001394"
     CDS             16579..17220
                     /locus_tag="QEL58_001394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012479707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavin reductase"
                     /protein_id="HDS1675878.1"
                     /translation="MTRPSIPRRRITPSVLYPGTPVLLMTTLNPDGSSNVSPLSSFWA
                     LGNRVVLGLGTQGQGYRNLQLRNECVLNFPSSAQVAQVEAIARATGRDPVPDAKQAMG
                     YVHVRDKFALGGFSSVPSVQVAPATIAECPLQVEVTMMAMQPPSDDDGQGFVIAEGRI
                     RCVHAHEDITQAGTQHIDVARWKPLIYLFRHYLGVGEPVARNFRAQTPERAPA"
     gene            complement(17229..17774)
                     /locus_tag="QEL58_001395"
     CDS             complement(17229..17774)
                     /locus_tag="QEL58_001395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005412835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4124 domain-containing protein"
                     /protein_id="HDS1675879.1"
                     /translation="MKGILLAVALMAGSAPLASAQVYKCKGASGETVYSQNPCAAGAE
                     PMKLRSTRPSTESAGEASNRAAVYQNTALADAGIAERNCVQGERSRIYGPLESRSQQV
                     GRQIAELNRQLATAGTNLAGATQDSGIRAQIASLQQSMSAERVAADTQMSNAREQCAA
                     TRRERERSVRDTFSNTPATTR"
     gene            complement(17885..18382)
                     /locus_tag="QEL58_001396"
     CDS             complement(17885..18382)
                     /locus_tag="QEL58_001396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014036636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDS1675880.1"
                     /translation="MLIRPLQHDDADTFWAARLQALRESPAAFLSTLAEASGETAQVM
                     QTQLDDAHTRYFGAFDQAQLVGFLRYVRPVRLSRRHTAEIHSVHVGAAHRGQGIARQL
                     FLGAFAAARAEDIESLTLTVLADNTAARGLYASLGFIESGTEPRAVKRDGRYVDMVSY
                     WIALA"
     gene            complement(18652..20424)
                     /locus_tag="QEL58_001397"
     CDS             complement(18652..20424)
                     /locus_tag="QEL58_001397"
                     /inference="COORDINATES: protein motif:HMM:NF024573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDS1675881.1"
                     /translation="MFISSVRVINFRSLVDLHVDLNVYTALVGLNDAGKSNVLRALNL
                     FFNGETDVNEPLIFERDFAQKAKVGKNKARQITIELELRPPSHYQDSGPIVWRRMYRS
                     GSSAVFAESLVRKDGENFSANSRVAYWARSLAFEYVPAVRGRPFFTILKRRLHNALAA
                     TVAEKLKGASDAFLEGLRAEVSKIEEDSFRLLALKTEFSLPPDLGDLFEALEFNSADS
                     GASTALYNRGDGVQGRHVPLILKFLAEQRKKNSAKGRPASETIWGFEEPENNLELAKQ
                     VEVANEFAEYSSEIQIIVSTHSPAFYKVAKESEFGSVQFARRVGGVTSFDVAPVAQTV
                     DASLGLMPFVEPYLQLAQEKRDEAITAMEELRASSLLQDGNALIVEGSTDQVIISGAL
                     KALDEVIDAQIDFKDGMGGGVNWVADRCIARAALTDVSGNTVALLDGDDAGKDAKRKI
                     QEFLHSHKRAGRVKVLMVGGDFANDHALEIVKSGITLPWAIEELCDPVIWQHAQSKGW
                     LEPRTLDLLKLNHGKMGKSETIEQFVASRITDPGLRLLVEYRVRPEMKMKFATYVAEL
                     MELAGYVPPSLEKLILALKGELER"
     gene            complement(20729..20802)
                     /locus_tag="QEL58_001398"
     tRNA            complement(20729..20802)
                     /locus_tag="QEL58_001398"
                     /product="tRNA-Cys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(20768..20770),aa:Cys,seq:gca)
     gene            complement(20870..20945)
                     /locus_tag="QEL58_001399"
     tRNA            complement(20870..20945)
                     /locus_tag="QEL58_001399"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(20910..20912),aa:Gly,seq:gcc)
     gene            complement(21088..21163)
                     /locus_tag="QEL58_001400"
     tRNA            complement(21088..21163)
                     /locus_tag="QEL58_001400"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(21128..21130),aa:Gly,seq:gcc)
     gene            21292..21693
                     /locus_tag="QEL58_001401"
     CDS             21292..21693
                     /locus_tag="QEL58_001401"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675882.1"
                     /translation="MFLRGKPLLIALLLHLLVALLYWALIPLGMNTYRDHFGFTSHRD
                     IGLGIAQFHLFWMFLAAQPLIAALRPLFAKLLVLAIPLAFATWTLMHNHPLRLLYFTI
                     GPGLLALGAIAVSLRYSSLGTSRPTTDIADA"
     gene            21686..22129
                     /locus_tag="QEL58_001402"
     CDS             21686..22129
                     /locus_tag="QEL58_001402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004152368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675883.1"
                     /translation="MPRRYVRLFWLLVSLTWLALIAALVNAGFTPDYWLLHHLEGIEP
                     RYPTSSVIVFALLGTVELVVTALIVRPWKLKRLWLRLLIAFALLLAWSVPWMLSAMHQ
                     PPVHGMHLLWLLLLDVGLLLALGGVSLVSVLGRLSTRKKARIAVP"
     gene            22244..22678
                     /locus_tag="QEL58_001403"
     CDS             22244..22678
                     /locus_tag="QEL58_001403"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675884.1"
                     /translation="MSLIFRACPAFWMLVFLIWLLLVSALIHAGFQPDHWQQPDIVSG
                     VVPYPTGSVISFALIILAEIVAMGLIVQPWRFRRLWLRMQLGIFPWLAWRAYWGAISM
                     HQSPVRAVHLLWLIAASAILLLAQFVIVPASLWPRLRRWLGS"
     gene            complement(22688..23602)
                     /locus_tag="QEL58_001404"
     CDS             complement(22688..23602)
                     /locus_tag="QEL58_001404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005415991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family efflux transporter periplasmic
                     adaptor subunit"
                     /protein_id="HDS1675885.1"
                     /translation="MTKTSHLLPLSLALSAALLLGACSKDAPAQAPAGKGSTATAGKV
                     AVARGIIDVEGGLIALAPPVDGSITAAPVKEGATVKKGQLLLSLDGALLQQEVAMATA
                     DLALANDRLKGSQAQLRELERNAARLSTGASEGVSSNQQADAARQQLAGVRADVDVAG
                     AQVDMAQHKLEHARLKLQQMSLSAPEAGTVVGQVPGLGAFVQAGKPAISLLPARPLQV
                     RAELSAAYADAVQVGMKATVVPDSDGAENTSALPSARVVRISPVFAQARLPEDAGRGV
                     AKVVECVLEFDGAAKARFGQHVRVEFRR"
     gene            complement(23599..24327)
                     /locus_tag="QEL58_001405"
     CDS             complement(23599..24327)
                     /locus_tag="QEL58_001405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019658988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDS1675886.1"
                     /translation="MTSTPAVAPTLQADALEKGFMSGDVQVPVLRGLSLDIYPGELTL
                     VSGPSGCGKSTLLSLLSGLSSPDGGRVHALGQDVGHMTRSEVERFRLHHVGFVFQGFN
                     LFPALTALEQVQLPLGYRGMSNRESEPLARRALEEVGLSHRSHMRPAQLSGGEKQRVA
                     VARAFAKSPTLIFADEPTSALDAENGQRVIDILHRYARAHGATVLCVSHDPRLIRHAD
                     RVIAMEDGMVRDDRRQNETVESAP"
     gene            complement(24338..25477)
                     /locus_tag="QEL58_001406"
     CDS             complement(24338..25477)
                     /locus_tag="QEL58_001406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012479690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HDS1675887.1"
                     /translation="MIALARKTLAYEWRRFLPVVLAMCFAGVLLIVQAALVLGIFGTA
                     AIYVKASSADIWAGFPGTQSVNYGHAISADVESHLRMDPDVTRVEPYEWVDGEWRSSA
                     QGTGNVSVYLSGISTQDDAMMFARILPADLRAQLREPGAVIVDSADLDTLGVDLQDNR
                     AWINGKAVRVVAAQPGLRGLGGVNVLASLDTARAIAGTDPHEGSTYFVAGLRSPELAD
                     RVRDRLAASMGQATPVEFWTAPEFASRSQQYWLFDTGAGIAVLFMAVIVCFVGAVITN
                     QSFASVVAGSVREYATLNALGAGRYALARVVFEQALLIGGVGMLLAAAFSTVVLLIAQ
                     TQRVPVQLTPMVIIGCVALVAVMAMLSSIMAVRSVVRSDPSLLLR"
     gene            complement(25474..>26071)
                     /locus_tag="QEL58_001407"
     CDS             complement(25474..>26071)
                     /locus_tag="QEL58_001407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005408898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HDS1675888.1"
                     /translation="QVPADLLRHRPQILLAESEVMQAAASKGSARAAMYPRVSLGGSI
                     LYAYNLTQNARSNSDSSPSIGPYIDIPLWDWGQRRARFHADEKQLDAALLGYRKAVLE
                     GVSEVEGALGSLARQDSSIQSLRAANDAAGQQVKRQARQVQLGLSSEFDGLDTQRAAL
                     SSQADLIGAQGARVLAFASLYRALGGAPLPVEGEGEPQ"
BASE COUNT         4519 a         8816 c         8210 g         4526 t
ORIGIN      
        1 tgaagtcaga acgcgctggg gcgcggctcg ggcagtggct ggtcgaccat cggcttcagc
       61 tcggcatcca gcgccacgcg ctcgtcgaac acgaaacagc ggccttcgta gccctcgcca
      121 ccgacgtcct cgaaatagcc gaggatgccg ccgtcgagct gcagcacgtt gtccatgccg
      181 tcgttgacca tccacagtgc ggccttctcg cagcggatac cgccggtgca gaagctgacc
      241 acggtgctgc ccttcaacgc ctcgcggtgc ggcgccagcg cctcgggcag gtcggtgaac
      301 ttgtggatgg gcagcaccag cgcatccttg aaggtgccgt actccacttc ctgcaggttg
      361 cgggtgtcga gcatcaccac cggcttgccg acgtcatcgt ggccctgccg cagccagcgc
      421 tgcaccgtgg ccggatcgac cgccggagcg cgcgggtact ccagcggctg gccgtcatcg
      481 cggcggaagc tgatgatctc gtccttcacc ttggccttca gccgcgcaaa tggctggtgc
      541 tcgctgaggc tggtcttgac ccgcatatcg gcaaaacgcg catcggcgtg cagcgccgcg
      601 tagaagccct cgaccgactt cggcgcaccg gccaggaaca ggttcagccc ctcgcccgcc
      661 accaggatcg tgccccgcag cccagccgcc tcggcccgcg ccagcagctg gtcgcacagg
      721 acctggggag cgtcgatgag ggcgaaatgg taggcggcgg tattggcgat catcccgcca
      781 ttttagcgcc agaccatccc aggagcagac ttgcccgttc atccccgcac cgcgtggatc
      841 tacaaagctc atgaatctgt caggggcggg gcggtgtggg caggcggggg cgcagagcgc
      901 catggatggc gctctacgag gcacgcagga gcagtttttg ccgtcccccg cctgcccaca
      961 ccgccacgcc atcccacgga atccagcttt tgccgttgcc gttgcctctg cgggtgccgg
     1021 gtgcaacccg gccggaagcc ccctttaccc ccgcaacagc atgaacggca gcagcaccag
     1081 cgccgccgcg cccgccatcc ccagcagcac cagcaccacg aacaccgggc gccgccgcaa
     1141 caggctgccg aaggtctccg ccgtgccatc acgcagcgcc tgctcgcgct ctgcacgcac
     1201 gcgctcgccg cgcgcggcct gatactcggc catcagcgcc ttcgcacgcg gatgatcggc
     1261 atcctcgcgc agccacaggc cgccgttgga gatgccccag gggctgggtt cggtgcgata
     1321 ccaggcgatg ccatgctgat ccagcagggt gcagacatcg gcatattcgt cgtcgccgac
     1381 gttgcgcaga ttgagcagga gttttgccat gcccacatga tacccggcac cgatgcgcta
     1441 cccttgccgc cctcgccctg cgcccttccg gagacgcccg atgcgccgcc tgctgcttcc
     1501 cctgctgctg tccctcgccg ccgctggctg ctcgaccggg ccctccggcc cgccgccggg
     1561 tggcaccctg accaccttcg agcgcatcga cagcgtgccc ggcaccggtg ccgaggctgt
     1621 cgccggcagc aaggtcaccg tgcactacac cggctggatc tacgacaacc gcaccgagac
     1681 caagcacggc aagaccttcg acagctcggt cagccgcggc gaaccgttca ctttcgcact
     1741 cggcgccggc caggtcatcc gcggctggga tgaaggcgtg gccggcatga aggtcggcgg
     1801 caagcgcacg ttgatgatcc ccccggacta cggctacggc gaccgccggg tcggtccgat
     1861 tccggccggc tcgtcgctgg tgttcgacgt cgagctgctc gatgtcaaac cgtaataccg
     1921 cagcgcagtg tcgggtcgcc gtgatcggcg gtggcccggc cggcctgttc gccgccgagc
     1981 gcctgcgtgc ggccgggctg gacgtcgacc tgtacgaggc caagggttcg cccggccgca
     2041 agttcctgat tgccggcaag ggcgggctca acctcaccca ttccgatccg cggccgctgt
     2101 tcgacagccg ttaccgcgag caggcggctg ccgtcggcca gtggctggac ggcttcgacg
     2161 cgcaggcgct gcgtgactgg gccgcaggtt tcggtgtgga gacctacgtg ggcagctccg
     2221 gccgcgtgtt cccggtcgac cgcaaggccg cgccactgct gcgcggctgg gtgcgccggc
     2281 tgaaggaaca gggcgtacgc ctgcatgcca accatcgctg gatcggctgg aacgacgacg
     2341 gcgcgctgcg cttcgccacc gaagcaggcg agattgatgt ccacgccgat gccacagtgc
     2401 tggcgatggg cggcggcagc tggccgcagc tgggcagtga cggcgcctgg gtcgcgcctc
     2461 tgcaggcgcg tggcgtggac attgcgcccc tgcagtcggc caattgcggt ttcgacgtgg
     2521 attggacgcc gttcttcgcc cagcgcaatg ccggcgcacc gttgaagccg gtggtcgcgc
     2581 actggatcga cctggccggc cagccgcagt cgctgcaggg cgaatgcgtg gccagcgagt
     2641 acggtatcga aggcagcctg atctacgcgc tggcggctga cctgcgcgag aacatcaacc
     2701 gcgatggcca cgccatgctg tggctggatc tggtgccggg ccgcgacgcg gcacgcctgc
     2761 tggccgacct gtcgcgcccg cgcaagggcc gcagcttcgg cgagcacctg cgccggcagg
     2821 ccggcctgga tgcggtgaag gcggcgctgg tgttcgagat cctcggcaag gaggccggca
     2881 atgatctgcc tgccgtggcc tccacgctca agcggctgcc gttgcgcctg ctgcggccac
     2941 gaccgatggc cgaagtgatc agcacggccg gtggcgtacg cctggatgca ctggatgatg
     3001 gcctgatgct gcgggcgttg cccggcgtgt tctgtgccgg cgagatgctc gattgggagg
     3061 ccccgaccgg cggctacctt cttactgcct gctacgccag cggcctgcgt gcggcggaag
     3121 gcgtgatcgg atggttggcc gggcggtgac gcccgaactg tagagccgag ccatgctcga
     3181 ctgcatttga ttcaggcgat aaagcagtcg agcatggctc gactctgcaa ttgccgggcg
     3241 ctcaccatgg ccggcgcatg ctcaccgagg ccagcgccac gccgctggga tgcgggtagg
     3301 cttcctcgcg ctcggcaatg aagccctgcc gttgatagaa cggcacggca ttgagcgagg
     3361 ccgacagcac cacgtcgcgc tcacggtcgg ccatcgccag caggcgctgc atcagggcct
     3421 ggccgatccc cttgccaccc cggtccggat caacgaacaa cgcatcgatt tcattggcat
     3481 cggtatcgaa cacgccgaag ccgagcaggg cgccctgcgc atcctcgacc accacgcaac
     3541 cgccctgccc cagcagccgc gcgtactgcg acggcggtgg cgaggccgac cagggcgcga
     3601 tcacctccgg cgggtaatgg ctgctgcagg tctcgcgcac gcaccgcgta cgcagcgccc
     3661 acagcgtggc tacatcgtcg gccgtacctg ttctgaactg catgacatct ccttgtagag
     3721 tcgagcttgc tcgactgttc ttcgttccag acacgcagtc gagcatggct cgactctaca
     3781 acggcagcta ccgcgacttg ctggcgcgca gtgcctggat cttcggcggc ggctggaacg
     3841 agtcgctgcg cgcatcggcc cagaacgcat ggaacaccgc gtggtcgggc accttgtgca
     3901 gcagctcgcc cggttccagg tagcggtaca aggaggcaag cgaacggatc tcgaccggcg
     3961 aaacgcgacg caggatgtgc tcaggcccca gttcggccgg atcgttcagg ccggccgcgc
     4021 acagcagttc cttcaaggca tgcagtgtgt gctcgtggta gctgtgcacg cgcgtggcct
     4081 tgtctggtgc gtccagatgc ttccagcgcg ccgggttctg ggtggcaata ccggtcgggc
     4141 acttgtcggt gtggcagctc aacgactgga tgcaacccag cgcgaacatg aagccacgcc
     4201 cggcattgca ccagtcggcg cccagtgcga tggtgcgcgc gatgtcgaat gcactggtga
     4261 tcttgccggc cgcgccgatg cggatgcgct cacgcagatc caggccaacc agcgtgttgt
     4321 gcaccagcag cagcgcttcg tgcatcggca cgccgacgtg gtcgacgaac tcggccggtg
     4381 ccgcaccggt gccgccctcg gcaccgtcga ccacgatgaa gtcgggaagc agaccggttt
     4441 cctgcatcgc cttggcgata ccgaaccatt cccaggggtg gccgatggcc agcttgaaac
     4501 ccaccggttt gccaccggac aacccgcgca ggcgcgcgac gaactgcagc agttcgacag
     4561 gcgtcgagaa cgccgagtga cgcgacggcg acacgcagtc cacgcccatc ggcacgccac
     4621 gggtcaccga gatctcggcg gtcaccttcg gcgccggcag cacgccaccg tgtcccggct
     4681 tggcgccctg cgacagcttg atctcgatca tcctgacctg gtcgtgggtg gcgttggcga
     4741 cgaagcgctc ttcgctgaaa gcacccttct catcacggca accgaaatag ccggagccga
     4801 tttcccagac cagatcgccg cccatttcgc ggtggtaggg cgagatcgag ccttcgccgg
     4861 tgtcgtggta gaagccaccg cggcgcgcgc cttcgttcag cgcacggatt gcattggccg
     4921 acagcgagcc gaagctcatc gccgaaatgt tgaacacgct ggccgaatag ggcttggcgc
     4981 agttggcgcc gatcagcacg cggaaatcat gcttggcaat ggacgtgggc gccagcgaat
     5041 ggttgatcca ctcgtagtcc accgcatagg tgctgcgcag ggtaccgaac ggcaccgtgt
     5101 ccatctcgtt cttggcgcgc tggtagatca atgcacgctg ctgccgcgag aacggcacgt
     5161 cttccaggtc gctctgcacg aagtactggc ggatctccgg gccgatcgat tccaggccgt
     5221 agcggaaatg cgccatcacc ggatagttgc ggcgcagcgt gctgcgcttc tgcagcagat
     5281 cccaggtccc cagcgccacc atcgcggcgg tcaggccgac gccccagtac caggccggcc
     5341 agatcgtggc cagccacagg catataggga acatcaggat ggcgagcagg tagacgatat
     5401 accggtgcat ggctttcctc ggttgcaact gcccccgagt ctaccgcgct gcccgtctgc
     5461 cgggtttgca ggcgatcgcc tttagacggg cctgggccat cgccggcacc cctgcttcat
     5521 gagcggcttc cactgttgaa ccgggggtga tacgactgaa atcggacagg cgtcgcccag
     5581 actggctcag gaacccagcg cgaccgccgc cggctcgagc tcgccgtctg cgccggtcca
     5641 ggcctgcagc aggcgttcga agccaccgct gccaagcagg aagcccggcc aagccgcctc
     5701 gacgatctgt gccagcaggt ctgcctcgat cctgcgggta cccatcgacc atcgcggaaa
     5761 cgcccgctgc agcaccggcg cgcggcacaa catcttcacc tgtccatggc tgcgggcatt
     5821 gacgatgcgc tggaacaccg aatcgatgcc atcttcgggg ccttccaggt actgcaggaa
     5881 acgcgtgcca tcgaacatca ggacaccggt gacacccgct acgcgattga atgccgtggc
     5941 atcggccaac aggcgatcaa gatcggttgt ctgcagatcg gcacgggcct cactggcata
     6001 ggcaatcgcg tgtagcgaca tcagatggct ccccccctgg gaacgatggc tggaactatg
     6061 acatgaatag gaacgacagt taagcacgcc acccaccctg cacaatcggg tcgcagccct
     6121 gcgggtgggc tacaatcggc gccgcgttgc aggcccggat ggcgaaactg gtagacgcat
     6181 cggacttaaa atccgccggg ggcaacccca tgccggttcg attccggctc cgggcaccaa
     6241 catcgcagcg caggatggcg tccgcccttc ggggcattgc acaaggaacc cgcacatgaa
     6301 gctttctgcc ctgatgcttg ccctgctctg caccgccagt cttccggcgt tggctcagtc
     6361 gcacttcgat acccgtcgca atcgcgatgg cagcatggac atccgccaca gcgatggttc
     6421 gtccacccgc atcacccgtg acctgtccaa acgcgtgatc gccgagcaca gcaacggcag
     6481 ccgctcggtc accacgaccg atctcagcgg acgcaagcgc accacctaca gcgacggcag
     6541 ctactccgac accaccaccg atctgagtgg caggatcatc acccagtaca gcaacggtgc
     6601 ccgctcgacc agcacacgcg acctgagtgg caggtggcgc accgagtaca gcgatggttc
     6661 gtactcgacc agcgtgcagg acctgagcgg caactggcgt accaccgcca gcggcggcat
     6721 ggcggccagg catccggagc gcggcttcgg caagaagcgc tgagttttca gatcgcacgc
     6781 gagtagcgcg gctgctcatg cgccgcgcgc aggtacggat cgaagcacat cgccagcagc
     6841 cgcagcagcg gccgtcccgg ctcgctggca cgcaccacgc cctcgcggta ctccgccagg
     6901 ccgtcctcct gcagccgctg caccgaccgc aggtcttcgg cgaagtaccg ctcgaaatcc
     6961 acgccgtggc gctggcccag cacagcgcca tccacctcgc cctggcacat cagctgctgg
     7021 atcagttccg cgcgcagctg gtcgtcggcg ctcaatgcca cgccgcgcca gaccggcagc
     7081 tggccctggt ccaccgcgtc ctcccacgac ggcaggtcac gcggattctg gctgtaggtg
     7141 gcaccaatgt ggctgatcgc actcacgccc aggccgagca gatcggtatc ggcgtgggtg
     7201 gtgtacccca tgaaattgcg atgcagctgg ccggcgcgct gcgcgcgtga cagatcctct
     7261 tccggcagcg cgaagtgatc catgccgatg tactggtagc cagctgcgga gagcttctcg
     7321 accgccaggc ccagcagcgc cagcttgtct tccggcgagg gcaagcggcg ttcgtcgatc
     7381 tgcttctgtg cgcggaacag gtgcggcagg tgtgcgtagc catacaccgc caggcgatcc
     7441 gggcgcagcg ccagcacccg ctcaagggta cggccgaacc cctccaggct ctgcccggga
     7501 aggccataga tcaggtcgac gttgaccgag cgcatgccgc tgtcgcggca ggcctgcaga
     7561 atatccagcg tctgctgcac gccctgtatg cggttgatcg actcctgtac gtgcggatca
     7621 aagtcctgca cgcccaggct ggcccggttg aaacccagcc gcgccagcat ggcgacgtcg
     7681 tgggtatcga tgaagcgcgg gtccagttcg atcgagaaat cgcgctgcgg cgaatcgctg
     7741 aagtcgaagc ggcggcgcag gccttccacc agcgcagtca tcgcctcggc ttcgaggaag
     7801 ttcggcgtgc ccccgcccag gtgcagctgg atgacctcgc ggccatcctc gaactgcggc
     7861 gccagcaggt cggcctcggc cagcacgcgc gagacgtagc tgtggccacg gccgcgatca
     7921 cgggtgatca cccggttgca gccgcagtag aagcaggggc tggaacagaa tggcacgtgc
     7981 acgtacagcg acagcgcgcg ggccagctgg ttgctgtcgg cgatcgcctg acgcagtgcc
     8041 ggcgcgtcga agccgtcgtg gaaatgcggc gcggtcgggt acgaggtgta gcgcggcccg
     8101 ggccgatcgt ggcggcgcaa caggtcgggg tcgaaggtcc aggccaggcc gccggcagcg
     8161 ggagagaacg tgtccatggc gccagcatcg cgccgggcgg ccgtgaccgc cttgacccag
     8221 atcaatcctt ggcagggatg cccagcaccg gcaggccgac ctgcggccag cgcagcatct
     8281 ggtagcgctt ccagaaggtg tcaccgatgc gtgcggccac gtcgttggcc agcgcctgca
     8341 tcggcgggtt gttgcattcg gcggtggtga tgcggaacag caccagccag cggtcgaaca
     8401 gatccttgtc cagctcgatg gccatgtgct tggacatcgg cgagcccttg aagcggcggg
     8461 tagcgcgcag catcgccgac cagaagtcga ccagctgcgc caggtgctcc ggccagtcgt
     8521 ggacatgcgc ttcgaacacc ggccccaacc gctcttcttc gcgcacgcgc gcatagaagt
     8581 cgtggaccag gcgggtcacg tcctgctcgg tacacaactc gggcgaggca acggggagga
     8641 caggcggagg cgtggcgttc atcgggtacc caaagcgtgc cggcagtgtg ccgcagccgg
     8701 ccggcaccgc cgttgatcca gatcaatgtc ggcgcagttc gctgccccta ggctggcacg
     8761 cttgcaggaa gcatgccctg cggatgctgc gccggaccag gcggagtata cgcgccgccc
     8821 acttatcgat ccgggacagc atgaacagac cctccctcag ccgccgccag cagctgatcc
     8881 agcattgggg cgccatcctc tggcccagct tcatcgccgc tggcgtggcc agcatggtgt
     8941 tcttcgcctt cgtcgatccg ttgcgcctgc aggccatcag cttcccggga accaccatca
     9001 gccgcgagct gggctatacc gcaggctttt tcatgttctg gacggtgacg gcgctgtcca
     9061 gcgcggttac ctggtacctg caacggccga tgccgagcga cgacgacgac gagctgccac
     9121 tgggatgagt acgccctgcc ccacgacgcc gcgcccgcgg cactggcgcg gcatcctcag
     9181 cgcaggcctg ctggcactgt tctatgcgct gccctggttg cgctgggacg gtcatcaggc
     9241 cgtgttgctg gacatcaatg cccggcgctt cgacctgttc ggctggacgc tgtggccggg
     9301 tgatgtggga gtgctgattg gcctgttggc agtgctggcg gtgagccttg cactgctcac
     9361 tcatctggcc ggacgcatct ggtgcggcca tgcctgcccc cagacgctgt ggagaggtgc
     9421 cttcgactgg atcggccaca ccgtgtcccg ggcactgccg ccggcactgg cgcggccggc
     9481 cacgcagctt gcatggggcc tgctgtcgct gtggaccgga atcacctttg tcggcctgtt
     9541 cagcccgatc gccgggctgg tggccgccgc gccgcacgcc gcctggagtg gctgggaaac
     9601 gttctgggta ctgttctacg ccgctgccac ctggggcaat gccggcttcc tgcgcgagca
     9661 ggtctgccgt tcgctgtgcc cgttcgcacg cctgcagcca ctgctgaccg atccccatac
     9721 accgcgcgtc ctgtatgacg cgcgccgcgg cgagccgcgc ggaccgcgcc catccggcct
     9781 gggtggtgtg ctcggtcgcg gccgtggcct gctcgacccg accaccgcgc aggactacgt
     9841 gttccgtgcc gcgcatccgc tgctggcagg accgatgcca accttcagcg cagaccgcct
     9901 gggtgactgc accgactgcg ccgcgtgtgt cagcgcctgc ccgatgcagc tggacatccg
     9961 ccaggggccg caggccgatt gcctggcctg cggcgcctgc ctggaagcct gcgcacagca
    10021 ccagcaccgg gccggtttcg gccgggggct gctgcgctac tgcagtccgc aggtgatgac
    10081 cggccaaccg cggcgctggt ggcgaccgcg aaccctggcc ctgctgtctc tgctgctggc
    10141 gctgcttgcc tgcggcggct ggcgcctgct ctgaatcagc gcggcccgtc ggcgtgcggc
    10201 gggaccagct gtgcacggcg gacaatgccc agctgctcga tgatcagcgc catttcgttg
    10261 gtgacttcgg tgcgttcggt cccctgcggg accaggcgat ccagcacctg ctggtaggta
    10321 tcccagaacg ccggaccgca tccgtgtttg tgatagctgg cttccagttc gcggcgtacc
    10381 cgttcagcca agccatgcat gccgtattcc atacgacctc cgttggactt gttctgcatt
    10441 gttgacggtc taccgactca cttgcgtgct actgaaagac tcccgggctt cacgtccggt
    10501 tgatgccaat tagtcataga tttcacgaca ggtcaattac atgcaccgac tttcgtgatc
    10561 gaaattatta atcgttcaca aaactacata cgctgccccg gtggtgccgg atgggttgaa
    10621 cccgacgtgc cctccggccg gcagacgccg aactcctatt gacgacactg attgagttct
    10681 ttcgatccat tgaatttgcc cattttgcta agtctactta gcaaatggtg cttagcgtgc
    10741 tagatgcgac aaaagacggc gcagatcaga tggattcgct gcctggcgcg tcggttgcag
    10801 ggaacagatg cgggtagcgc tgacgtagga tgtactgcct cagggcagga atcggaaggt
    10861 ccttaggcca ttgcgacact gcggatcggc ttatgccaaa gaagcgggcc agttcggcat
    10921 cggtcctcag tcccagccgg gtacgcacct gccgtttgct ccagaattcg gtcacggtcg
    10981 gttcttctgt taaccagact tattctcgcg gcaaggattc ttggcattcc acgcgttaag
    11041 ctggcttgca tagatgaata ctctcggcca acgactcgcc gccgccatga agaaagccgg
    11101 gcaccctcgc ccggccgatc tggcccgcgc cgccaaatcc acaacggcaa ccatcagcaa
    11161 ctggctcaat gaccatgtga gcgcctccca tgtgaaggcc gcacagctgt tccgcatcgc
    11221 cgatgcggcc aagctggacg cgcgcgaact gctgtacggg gtgaccggac gcggcgtagg
    11281 cgaacccggc aatgcctaca tccccagcca ggcccatctg gatgtctggc aggacgccta
    11341 cgagctggtc agccacctgg tggccgagaa cgggctggag atcgaccacc gccgccatgc
    11401 cgcgctggac ctgctcgcgt tcgagctgct gatggatggc ttcagccgca gcaaggtcgc
    11461 ccgcgtactg acgacctcga tgacgtaaac gcactgccgc tggtagcatg gcccgcgatg
    11521 gggatggagc tccccgataa ccgcctggaa gggctgatgg ctcctgccaa gacgaacccg
    11581 gtgttcgtcg acggcaggcc gtgcctgccc tcggcgttcg ccatcggacc tgcgaacccg
    11641 cactcgaggc acgcgatgca agcattgaac aattacttcc tggtcttcat cggaggcggc
    11701 ctcggtgcct gcctgcgcca tgcctgcaac ctaatcggcg cacgcgtcgc ggtcggcagc
    11761 ccgtggccct ggtcgacctt cctgatcaac atcagcggcg cgctgctgat gggcgtggtg
    11821 gtcgaggcct tcgccctgcg caatggcgcc tcgccgcagc tgcggctgct gctggccacc
    11881 ggcattctcg gcggctacac cacgttctcg acctatgcgc tggagatcgg cctgctgctg
    11941 cagcgcggcc agcatgggct ggcagcattg tatgccgggg gttcggtggc actgggcctg
    12001 gccggcctgt tcggcggcat gaagctggcc cggctggtgc tgggctgacg atcaggccgc
    12061 gctggcgcgc gcctgcacac gccattcccg tggcgactgc ccggtgtgtg ccttgaacgc
    12121 gcgcgacagg gcggcctcgc tgccgtaacc gacgtcatcg gcaatccgct tcaagggacg
    12181 gccctggcgc agtgcctgct gggccaaccc cacccgccag ccctgcaggt agtggcccgg
    12241 cgtcgtaccc atcgcctcgc ggaaactggc cgcaaacacg ctgcgcgaca tgcccgccac
    12301 atcggccagg tcttccagcg tccacgcctg tgcgggcgct gcgtgcatcg ccaccagcgc
    12361 caagcgcagg cgtggatgac cgagcccggc gaacaggcca ccgcgcatct cgccgccttc
    12421 catcagctgg cgcagtacct ggatcatcac tacctcgaac aggcggttga ccattgccgc
    12481 ccgcccgcag cgctgctcga aggcctcttc gaacagcagc tccagcgcgg catggccgcc
    12541 gtacaggtcg gccagcggca ggcagatgaa atcgggcagc gcagcgctga ttggattgag
    12601 ccggccgcct tcgaaatgca ggttggcgca ggccatgtcg gcgccaagct gcgggtcggt
    12661 aatgaaccgg tggggcatcg gccgggggta cagcaacagg ctgggggcct cgacctgcac
    12721 cgtctgctgg ccatggctga cctgcagcgg tccccgccgc accaggtgca gctggccggc
    12781 ctcatcctcg ccttccaggg tattgatgcc gcacaacgcg ccggcatgga acaccgaggc
    12841 ggtgaccgcg aagcgttcga gcaggatggc gagacgatca accatgacgg gactccagat
    12901 caagcggcac tgcttcaata cgacggatcg tatcggattc accacgtcat tgggcgaacc
    12961 ggccggcggc cctacctgga agtgccgcga aggctgcatg gccgtgacga ccgcgcgacc
    13021 gaccggcact tccctgcggc aatgcagcgc gcgcaacatt cccggggcat ctatgctcgg
    13081 cgccattccc ggatggaaca accacgatgc gttgcttgct tcgttgcgcc ttcgctctcg
    13141 gcctgctgct gccgtcgaca tcgttgctgg ccgcaccagc gactgcacca cgcgcgctca
    13201 gtggcgaact gcagggagcg ccgtggcgcc tggacgtgcc ggccagctgg aacggcgacc
    13261 tggtgatgct ggcgcatggc tatgagccgg tgggcgtgcc gcgcaccacc ccgatggccg
    13321 ccaacgacag caccgcaaca ctgctggccg ccggttacgc cgtcgcgcag agcgcgtatt
    13381 ccagccaggg ctgggcagtg gccaatgcga tcaccgacat ggagcgcctg cgccagcacg
    13441 cgctggacga actcaagcgc gtgcgccaca cctggctgct cgggttctcg atgggcggcg
    13501 cggtggccat cgccagcctc gagcgatatc cgcagcacta cgccgggggc gcctcgctgt
    13561 gcggcgccaa cctcagtggt gagcagatcg ccgccgacct gctgaccaca ctggtcgcgt
    13621 tcgattactt cttccccgaa gcagaaggcc tgccagctgc tgggctcgcc tcggcggaag
    13681 cggccgtgct gccacaggca accctgtatc aaggcattgc caatgcgctg cagcggaacc
    13741 cggaacatgc cgccgtgctg gccaggcagt tgcaggtctc tacggatgcg ctggccggta
    13801 cgatcagcct gcacgcactg gtcctgcacg aactggccac gcgcagtggc ggcatgccgg
    13861 tgggcaacag gggcgtggtc taccgcggct tcggtgacga tacggcgttc aatgccggtg
    13921 tgcagcgtgt cgacgccgtg cctgccgcgc aggccgatgt ccgcgcgacg ctggcactga
    13981 gcggcgcctt gaagcgaccg ctggtgatcc agttcaacca caacgatccc accatcgtgc
    14041 cgcgcatgca ggcggtgtat ccgcagctgg ccgcgcgcgc cggcgcacgg cccttgccac
    14101 gggtgttgcc tgcggcgggc gaagggcatt gcggcttctc tgaagccgag gtggtcgagg
    14161 cgttgaaggc tgcacagcgg tgaaaacaat gcgtgtcgcg gtgcgtcaag gccgcgctgg
    14221 aaggactgct atggtagccc cgcccattga tgggcagaca aaggactgac gtgatgatca
    14281 agacgacctt gaagaccgtg atgttccttg gcatggccgt gaccggcctg gccttcgccg
    14341 ctgactcttg cgacttctgc acgctgaaat acgagcagtg cctgcgggcg acacatggac
    14401 cgttgggcaa gacttccgaa caatgcgacg ccgagtaccg cctgtgccgt gaaatggatt
    14461 gcccttctcc ctgaccggca tccggccggc tcctgcgggg gccggctccg cccgctgcgg
    14521 tgccgaacgc ttacgatgca gagaccggtg gagttcctgc cgccgccctt ccctgctgaa
    14581 gcaacgcacc cgatggcctt cttcaaacga ctgagcgaaa cccgctacct gccgaccgaa
    14641 cataccggcg gcgcctggaa catccgcgag cagcacatcg cgccggcgat cggcctgctc
    14701 gcccaccacc tggagcgtga tgccgcggcg cggggccatg gcttcctgat cgcgcgcctg
    14761 tcctacgaca tcctcggcac cattccgatc gaagcgatgg aggccgacgt acaggtgctg
    14821 cgaagcggcc gcaccatcga actggtcgag gccacgctgc ggcatgacga tcgcccggct
    14881 ctgcgcgcgc gcgcctggtt gatgcgcccg aatgacaccg aggccatcgc cggcacgccg
    14941 attccaggca taactccacc ggagtcgatg ccggcatggg acccgggcac ggtctggccc
    15001 ggtggcttca tccagagcat cgagatccgt cgccacgatc aggggcccgg ccgcgcaacc
    15061 tactgggcac gcgcaacgca gccgctgctg gatagcgaga cggtcagccc attggcccgc
    15121 gccgcgacgc tgttcgacct gtccaacggc atggcggtac gtgccgatcc gaaggaggtg
    15181 gccttcccga acctggatct caccgctcac ctgttcggcg tgcccgaagg cgagtggctg
    15241 ggcttcgaca cgtcggtgtc gttcggccgc cagggcatcg gcctgaccag caccgtgctg
    15301 catgatgcac gcggcccgat cggaacactc ggccaggcgc tgacggtgcg cccgtaaatg
    15361 caatgggcgg cgtcagccgc ccagcgtacc catggtgaag gtgtagcccg aactcatcag
    15421 gaactcgcgc atgcgcattt ccgcgcggcg cggcgaggcc agattggccg gtgcgtacag
    15481 cgcgtagacc acgcccgcac cttcgatggc ctcgcgacgc accccgcagt gccgggtctc
    15541 cgaagcgatc acccacccat ccttcaaccg gtcgggcccg atcgactggc cgttcatcag
    15601 ccggaacgtc agccagcgta cttccgcagc ggatttgctc atcgccggca ttccggcggc
    15661 gtattgcggt ccatcatgtc cttgctcgcc attgcagctc cctaagactt ggaacctgac
    15721 catagcgcct ccccatgtcg cggtcggatg agactggctg gtacagctca ggttgccagg
    15781 ccgaaccgct tccacagcgc ctcgcgcccc gtcggtgtca gccgaagttc gcgccgacct
    15841 tcaacgcgcc gcagccagtc attcttcacg aagctgtcca gcatcgcctc accgaccagg
    15901 ccggccagat gcgggcgccg ctccgtgcaa tccaggcagc cccggcaata gcgtgcgggc
    15961 ttgctggttg cggggcgctg cagcacctcg gccagcggct ggccgagcgc cttcaggaac
    16021 tcggcgccct ccagagtcac ttgccagtag ccatcacgcg gcaaaaggtg cccggcctgc
    16081 agcaggcgtt cggtaatggc cacggcatgt acaccggcca ggtgccggta gcacgagcgc
    16141 gcctcgcgca acgccggcat gctgcgcgac gcagcagcgg tgtaggacgg cgtgcggccg
    16201 gcaacccgca ggataccttc cagcatgtcg gcgacctcgg tggacgccag ccgatggtag
    16261 cgatggcggc cctgtgggat ggcgaccagc agatcgcctt cgatcaggcg acgcagatgc
    16321 gtgctcgccg tctgcggcgt caccccggcc acccgtgcca gttccatggc ggtgtaggcg
    16381 cggccatcca tcagctgcag cagcatcgtg gcgcgcgcct ggtcaccgac cagggcaccg
    16441 acactgacaa gggaaccgga ggtgtggacc atgccggcat tgtggcatgc aaggcccggc
    16501 cgacagttcg atgcaggccg aagcatcatc cgccttcccc ggcgcacagt ggccgtcccg
    16561 tttcacgcga gaactgctgt gacccgccct tcgatcccgc gtcggcgcat caccccctcg
    16621 gtcctgtacc caggcacgcc ggtactgctg atgaccacgc tcaatccaga cggcagcagc
    16681 aacgtcagcc cgctctcctc gttctgggca ctgggcaacc gggtggtact ggggctcggc
    16741 acgcagggcc agggctatcg caacctgcag ctccgcaacg agtgcgtgct gaactttccc
    16801 tcctctgcgc aggtggccca ggtcgaggcc atcgcgcgcg cgaccgggcg tgacccggtg
    16861 cccgatgcca agcaggcgat gggctatgtg catgtccgcg acaaattcgc gttgggcggc
    16921 ttcagcagcg tgccgtccgt gcaggtggca cctgcgacga ttgccgaatg cccgttgcaa
    16981 gtggaagtca cgatgatggc aatgcagccc ccaagcgatg acgatgggca gggcttcgtg
    17041 attgccgagg ggcggatccg ttgcgtgcat gcccatgagg acatcaccca ggccggcacg
    17101 cagcatattg acgtggcacg ctggaaaccg ctgatctatc tgttccggca ctacctgggc
    17161 gtcggcgaac ccgtcgcgcg caacttccgg gcgcagacgc cggagcgggc tccggcgtag
    17221 cgggcggatc agcgcgtggt cgcgggcgtg ttgctgaacg tgtcgcgcac cgagcgctcc
    17281 cgctcgcggc gggtcgcagc gcactgctcg cgtgcgttcg acatctgggt gtccgcggca
    17341 acccgctccg cactcatcga ctgctgcagg ctggcgatct gtgcacgaat gcctgaatcc
    17401 tgggtggcac cagcgaggtt ggtgccggcc gtagccagtt gccggttcag ttcagcgatc
    17461 tggcggccca cctgttggct gcgtgactcc aacgggccgt agatgcggga gcgctctccc
    17521 tgcacgcagt tgcgctcggc gataccggcg tccgccagcg cggtgttctg gtacacggcg
    17581 gcgcggttcg acgcctcccc cgcagattcg gtcgagggac gggtggaccg cagcttcatc
    17641 ggctcagcac cggccgcgca cggattctgg ctgtacaccg tttccccgga tgcgcccttg
    17701 catttgtaga cctgggccga cgccagcggc gcgctacccg ccatcagggc taccgcaagc
    17761 agaattccct tcatccctca cctctccctg gttcgcaatg gatcaccaac gcacgatacg
    17821 gcggatcggg gatgcctgca cgtgccgccg ggctgtcctg gcatttcgca ggccccctcg
    17881 gccgtcaggc cagtgcaatc cagtacgaca ccatgtccac gtagcggcca tcgcgcttca
    17941 ccgcgcgcgg ctcggtgccg gattcgatga atcccaacga cgcgtacagt ccgcgcgcgg
    18001 cggtgttgtc tgccagcacc gtgagggtga gcgactcgat gtcctccgcg cgtgcggcgg
    18061 caaacgcacc aaggaacagc tgccgggcga ttccctgccc acgatgggca gcgccgacgt
    18121 gcacgctgtg gatctccgcc gtgtgccgcc gtgacaaacg tacaggccgc acatagcgca
    18181 ggaagccaac cagctgtgcc tggtcaaagg cgccgaagta acgggtatgg gcgtcatcga
    18241 gttgagtctg catcacctgt gcggtctcac cgctggcctc ggccagcgtg gaaaggaacg
    18301 cagcgggtga ttcacgcagc gcctgcaggc gggccgccca gaacgtgtcc gcgtcgtcgt
    18361 gttgcagtgg ccggatcaac atcccaggtt cctgcaggcg ttcatgcgca gtggtcagcc
    18421 tagcagtcca gtcccagcga cgtacatgaa gtttggcagg gccacgccgc aggtgcgcta
    18481 cgcagaaata aaaaagccct gaccggagtc agggcttttc aattggaggc ctcaagcgga
    18541 atcgaaccgc tgtaaacgga tttgcatccg attcgtcgcc atcagaaaca atcgcttagg
    18601 cactctgcca cctatttcga catccagcaa atagaatcgt acttgtgccg ttcagcgctc
    18661 gagctcgcct ttcagagcaa ggatcagctt ttccagactg ggagggacgt agccggccag
    18721 ctccatcaac tctgcgacat aagtagcgaa tttcatcttc atctcgggcc tcacacggta
    18781 ttcgacaaga agtctcagtc cggggtccgt tatccttgaa gccacgaatt gctcaatagt
    18841 ctcactcttc cccatcttgc cgtgatttag cttgagcaag tcgagtgtgc gaggctcaag
    18901 ccatcccttg ctttgcgcgt gctgccaaat aactggatcg cagagttcct caattgccca
    18961 aggcagggta attccgcttt tcacaatctc aagcgcatgg tcattggcga aatcgccgcc
    19021 caccatcagc accttcacgc gacccgctcg cttatgcgaa tggagaaact cttggatttt
    19081 tctcttagca tcctttccag cgtcgtcgcc atccagaagt gctacggtat tcccgctcac
    19141 atctgtcagt gcagctctag cgatgcaccg atctgctacc cagttgacgc cccctcccat
    19201 accatcttta aagtcaatct gtgcatcaat cacctcatca agggccttga gagcccccga
    19261 aataatcacc tgatcagtgg atccttcaac aatcaaagcg tttccgtcct gcaacaggct
    19321 cgaggccctt agctcctcca ttgcagtgat cgcttcgtct cgcttctcct gggccagttg
    19381 caagtacggc tccacaaatg gcataagccc cagcgatgca tcaacagttt gcgcaactgg
    19441 tgccacatcg aatgaggtca cgcccccgac tcgcctagca aactggacag aaccaaattc
    19501 gctttctttg gcaaccttgt agaacgcggg agaatgcgtg ctgactatta tctgaatttc
    19561 agaagagtac tccgcaaact cgtttgcaac ctcaacctgc ttcgccagtt cgagattatt
    19621 ctctggctct tcgaatcccc aaatcgtctc cgatgccggc cgacctttag cggaattctt
    19681 ctttcgctgc tcggccaaga acttcaggat caaagggacg tggcgccctt gaacaccgtc
    19741 ccctctattg taaagcgctg ttgacgcccc tgagtctgca gagttgaact ccagggcctc
    19801 aaagagatcc ccaaggtcag ggggcaaaga gaactcagtt ttgagcgcaa gaagtcggaa
    19861 tgaatcctct tcgatttttg aaacttccgc tcgcaggccc tccaggaagg cgtcagaggc
    19921 acctttgagc ttctcggcta ctgtcgctgc aagtgcgttg tgaagtcgcc tctttagaat
    19981 ggtaaagaaa ggacgccccc ttactgccgg tacgtactcg aaggctaagc ttctggccca
    20041 gtatgcaaca cgggaattag ccgagaaatt ctcgccatct tttctaacca gcgactcggc
    20101 gaaaacagcg gaagaaccag agcggtacat ccgtcgccaa acgatcgggc cggaatcttg
    20161 atagtgggac ggtggtcgca gctctaactc aatcgtgatc tgccgcgcct tatttttccc
    20221 cacctttgcc ttttgagcaa agtctctttc aaaaatcaaa ggctcattta catcagtttc
    20281 gccattgaaa aacaagttta acgcgcgcag cacattgctt ttaccggcgt catttaagcc
    20341 gaccaaagcc gtgtagacat tgagatccac atgcagatcg acgagagacc tgaaattgat
    20401 tactcgaacg cttgagatga acatcgttcc ctgacagtac actgaacaag tatgcgttct
    20461 atcacaattt cacggtccaa ggtcgtcagc gagtcttggt gcgcatagtt ctcgtctggc
    20521 ggcggctggt cgcttaggac aggagccgaa aacgacctcg ggagcgcaag actctgaact
    20581 cgcgtaagcg cactcgacac atgtttacgc cagtttgcca cccaaaaacg ggtggcagac
    20641 cgacgatttc acccccaaaa gaggggattt cattcgcagc cgccaaacgc caggcaaaga
    20701 aaaacccctg acgaatcagg ggtttatttg gaggcctcaa gcggaatcga accgctgtaa
    20761 acggatttgc aatccggtgc atagccactc tgccatgagg ccaacgtact gcgcgccagg
    20821 aacgaagccc ctgacaagac aaaaccccaa gatggggcct gtcggaacat ggagcgggaa
    20881 acgagactcg aactcgcgac ctcaaccttg gcaaggttgc gctctaccaa ctgagctatt
    20941 cccgcgtaag ccgacatggt accggaaatc cgggacacac accagcgatt tcacttttct
    21001 gactgcgcgc aaagccttgt ggcccaacgt gccccgcctt gccgtggcgg cagaaaaaca
    21061 aggcccctac cggggccctg tagaatctgg agcgggaaac gagactcgaa ctcgcgacct
    21121 caaccttggc aaggttgcgc tctaccaact gagctattcc cgcagattct tcgacctgcg
    21181 tcgaaggagc gctattgtgt ccaaattcct tcacgtcgtc aacagtcttc acacgatgcg
    21241 gtcacgggcg tccgcgctgg ggtacgctgc cccgcccagt tgccttcggc catgttcctt
    21301 cgcggcaagc ccctgttgat cgccctgctg ctgcacctgc tggtggcgct gctgtactgg
    21361 gcgctgattc cgctggggat gaacacctat cgcgaccatt tcggattcac ctcccatcgc
    21421 gacatcggcc tgggcatcgc ccagttccac ctgttctgga tgttccttgc cgcccagcca
    21481 ttgatcgcag ccctgcggcc actgttcgcg aagctgctgg tactggcgat cccgctggcg
    21541 ttcgcgacct ggacgctgat gcacaaccat ccgctgcgcc tgttgtactt caccatcggg
    21601 cccggcctgc tggcgctggg cgccatcgcg gtgagcctac gttattcgtc gctcggaacc
    21661 tcacgcccca ccacggacat cgccgatgcc tagacgctac gtccgcctgt tttggctgct
    21721 ggtctcgctc acctggctgg cgctgatcgc cgcgctcgtc aatgccggct tcaccccgga
    21781 ctactggctg ctgcatcacc tcgaaggcat cgagccgcgc taccccacca gcagcgtcat
    21841 cgtgttcgcg ctgctgggaa cggtggagct ggtggtgacc gcactcatcg tgcggccctg
    21901 gaaactgaag aggctatggc tgcgcctgct gatcgccttc gccctgctgc tggcgtggtc
    21961 ggtgccgtgg atgctgtcgg ccatgcacca gcctccggtg cacggcatgc atctgctgtg
    22021 gttgctgctg ctggacgtgg ggctgctgct ggcactgggc ggggtgtcgc tggtcagcgt
    22081 cctcggacgc ctttccacca ggaagaaggc ccggattgcg gttccgtaag gcaatgggtc
    22141 cgagtgcttt gccgtttcat ctttcggacc ttttgcatgg atagcggcag accaatccag
    22201 gaaggttgag gatcctccag caacggccgc ctgaatcgtg cccttgtccc tcattttccg
    22261 cgcctgccca gccttctgga tgctcgtgtt cctcatctgg ctgctgctgg tttccgcgct
    22321 catccatgcc ggcttccagc cggatcattg gcagcagcct gacatcgtgt ccggagtcgt
    22381 gccgtatccc acaggatcag tcatttcctt cgcactgatc atcctggcgg agatcgttgc
    22441 aatgggcctg atcgtgcagc catggaggtt ccgacgcctg tggttgcgaa tgcagctcgg
    22501 catctttcca tggctggcct ggagggccta ctggggcgcg atctccatgc atcaatcacc
    22561 cgtacgcgcc gtacatctgc tctggttgat tgccgccagc gccatcctac tgcttgcgca
    22621 gttcgtgatc gtgccggcct cgctgtggcc gcgcctacgc cgctggctcg ggagctgagg
    22681 ccgacaccta cctccggaac tccacccgca catgctggcc gaagcgcgcc ttggccgcgc
    22741 cgtcgaactc cagcacgcac tccaccacct tggccacgcc gcgccctgcg tcttcgggca
    22801 ggcgtgcctg cgcgaacacg gggctgatgc gcaccacgcg tgcggacggc agcgcactgg
    22861 tgttctcggc gccatcactg tccggcacca cggtggcctt catgcccacc tgcacggcat
    22921 cggcataggc agcgctcagt tctgcacgca cctgcaacgg gcgcgccggc agcagcgaga
    22981 tcgccggctt gccggcctgc acgaaggcgc cgaggcccgg cacctggcca accacggtgc
    23041 cggcttcggg cgcgctcaac gacatctgct gcagtttcag tctggcgtgt tccagcttgt
    23101 gctgggccat gtcgacctgc gcgccggcca cgtcgacgtc ggcacgcacg ccggccagct
    23161 gctgcctggc cgcgtcggcc tgctgattgg acgacacgcc ttcgctggcg ccggtggaca
    23221 gacgggcagc attgcgctcc agttcgcgca gctgcgcctg gctgcccttc agccggtcat
    23281 tggccagcgc gagatcggcg gtggccatcg ccacctcctg ctgcagcagc gcaccgtcca
    23341 gcgacagcag cagctgcccc ttcttcaccg tggcgccctc cttcaccggc gcggcggtga
    23401 tcgagccatc caccggcggc gccagcgcga tcaggccacc ctcgacgtcg atgatgccgc
    23461 gcgccaccgc gaccttgccg gcggtggcag tgcttccctt acctgcaggt gcctgggcgg
    23521 gcgcgtcttt ggaacaggcg ccaagcagca atgccgcgga cagggccagg ctgaggggaa
    23581 gcaggtgcga cgtcttggtc atggggcgga ctctacagtt tcgttctggc ggcggtcatc
    23641 acggaccatg ccgtcttcca tggcgatcac ccgatcggca tgccggatca ggcgcggatc
    23701 gtggctcacg cacagcacgg tggcgccatg cgcacgtgcg tagcgatgca gaatgtcgat
    23761 cacgcgctgg ccgttctcgg cgtccagcgc gctggtgggt tcatcggcga agatcagcgt
    23821 cggtgatttg gcgaaggcgc gggcgacggc aacgcgctgc ttctcgccgc cggacagctg
    23881 cgccgggcgc atatggctgc ggtggctgag gccgacttct tccagcgccc tgcgggccag
    23941 cggctcgctt tcgcgattgc tcatgccacg gtagcccagc ggcagctgca cctgctcaag
    24001 cgcggtcagc gccgggaaca ggttgaagcc ctggaacaca aagccgacat ggtgcaggcg
    24061 gaaacgctcg acctcgctgc gggtcatgtg acccacatcc tggcccagcg catgcacgcg
    24121 gccaccatcg ggtgaagaca ggccggacaa cagcgacaac agcgtgctct tgccgcagcc
    24181 ggacgggccc gacaccaggg tcagctcgcc ggggtagatg tccagcgaca gaccgcgcag
    24241 caccggtacc tgcacatcgc cggacatgaa gcccttttcc agtgcgtcgg cctgcagggt
    24301 cggggcgacg gcgggtgtgg aagtcatcga ccggtcctca acgcagcagc aacgatggat
    24361 cggagcggac cacgctgcgg accgccatga tgctggacag catggccatc accgcgacca
    24421 gcgccacgca accgatgatg accatcggcg tcagctgcac cggcacgcgc tgggtctgcg
    24481 cgatcaacag cacgacggtg ctgaacgccg ccgccagcaa catgccgacc ccaccgatca
    24541 gcagcgcctg ctcgaacacg acccgcgcca gcgcgtagcg gccggcgcca agcgcattga
    24601 gcgtggcgta ttcgcgcacc gagccggcca ccaccgaagc aaacgactgg ttggtgatca
    24661 ccgcgccgac gaagcagacg atgaccgcca tgaacaacac cgcgatgccg gcgccggtat
    24721 cgaacagcca gtactgctgc gagcggctgg caaactcggg cgccgtccag aactcgaccg
    24781 gcgtggcctg gcccatcgac gcggccagac gatcgcgcac gcggtcggcc agctccggcg
    24841 aacgcaggcc cgccacgaaa taggtactgc cttcatgcgg gtcggtaccg gcaatggcac
    24901 gcgcggtatc cagcgacgcc agcacgttga cgccgccaag gccgcgcagc cccggctgtg
    24961 cggcaaccac gcgcaccgcc ttgccgttga tccaggcacg gttgtcctgc aggtccacgc
    25021 ccagcgtatc cagatcggca ctgtcgacga tcaccgcgcc cggctcgcgc agctgcgcgc
    25081 gcaggtcggc cggcaggatg cgcgcaaaca tcatcgcgtc atcctgggtg gagatgccgg
    25141 acaggtagac cgacacgtta ccggtaccct gcgcgctgga gcgccattcg ccatcgaccc
    25201 attcgtaggg ttcgacgcgg gtgacatccg ggtccatgcg caggtggctt tccacgtccg
    25261 cgctgattgc atggccgtag ttgacgctct gggtgccggg gaaaccggcc cagatgtcgg
    25321 ccgaggatgc cttcacatag atcgcggcgg taccgaagat gcccagcacc agcgccgcct
    25381 gcacgatcag cagcacgccg gcgaagcaca tcgccagcac caccggcagg aaccggcgcc
    25441 actcataggc cagggttttc cgcgccagcg cgatcattgc ggttcgccct cgccctcgac
    25501 gggcagcggc gcgccgccaa gtgcgcgata cagggaggcg aatgccagca cgcgcgcgcc
    25561 ctgcgcaccg atcagatcgg cctgcgaaga caacgcagcg cgctgggtgt cgaggccatc
    25621 gaattcgctg gacaggccca actgcacctg ccgcgcctgg cgcttgactt gctggccggc
    25681 ggcatcattg gccgcacgca gcgactggat gctgctgtcc tggcgtgcca ggctgcccag
    25741 tgcgccctcc acttcgctca ccccttccag caccgccttg cggtagccga gcagcgcggc
    25801 atccagctgt ttctcatcgg catggaaccg cgcgcggcgc tggccccaat cccacagcgg
    25861 aatatcgatg tacgggccga tggagggact ggaatcggaa ttggagcggg cgttctgggt
    25921 gaggttgtag gcgtacagga tcgaaccgcc gaggctgacc cgcggataca tcgcggcacg
    25981 cgcggaaccc ttgcttgccg cagcctgcat cacttccgat tcggccagca ggatctgcgg
    26041 acggtgacgc agcaggtcgg ccggcacctg c
//
LOCUS       DAOKIP010000039        24999 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.039,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000039 DAOKIP010000000
VERSION     DAOKIP010000039.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 24999)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24999)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24999
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.039"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..265)
                     /locus_tag="QEL58_001408"
     CDS             complement(<1..265)
                     /locus_tag="QEL58_001408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010484160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-sensing transcriptional repressor"
                     /protein_id="HDS1675889.1"
                     /translation="MAHVHKNRKQLLTRVRRIGGQVAALEQALDRPEGQAGDCADVLV
                     QVAAVRGAAHSLLMELLHEHLQEHVVGAEDPQQRAAEAEVLVEL"
     gene            317..1288
                     /gene="dmeF"
                     /locus_tag="QEL58_001409"
     CDS             317..1288
                     /gene="dmeF"
                     /locus_tag="QEL58_001409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005412090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDF family Co(II)/Ni(II) efflux transporter
                     DmeF"
                     /protein_id="HDS1675890.1"
                     /translation="MHLDTLAAARRHEHRFDDGNPLAERNTRRALWLTVGMMLVEIVG
                     GWWFNSMAVLADGWHMSSHALALGLSVFAYRCARRYANDPRFAFGTWKIEILAGYTSA
                     IALLGVAALMAVQSLQRLWVPAPIHYDEAIAIAAVGLGVNLLCAWWLHDSPGHAHHHH
                     GHGHDHREHNGHDHDHNGHAHGHDLNLRSAYVHVLADAATSVLAIVALLGGKLLGLTW
                     LDPVMGLVGAVLVTVWAIGLLRDSGRILLDAQMDAPVVAEVREVIEQGPWPARLADLH
                     VWQVGRGKYAVSASVVTSDARLDADTVRNALAIHEELVHVTVEIHRS"
     gene            complement(1380..1664)
                     /locus_tag="QEL58_001410"
     CDS             complement(1380..1664)
                     /locus_tag="QEL58_001410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675891.1"
                     /translation="MAQGKAPWCGVASWLGMVVGWGAGTMAAQAAVAAGGNGLAAGMG
                     VAVLGAALVGAGFAVASRVRGERWPWIGIAGAVVSALPLLMYLLRMMLKL"
     gene            1755..2171
                     /locus_tag="QEL58_001411"
     CDS             1755..2171
                     /locus_tag="QEL58_001411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014645757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675892.1"
                     /translation="MRTLRLLLPGALLLLTACSGDAGLPFSADPLQGCFATSARKPAD
                     FRIEKEGGQYFVSFNRDGQWQREPNALHKASNSEISRYFRDDAAQIDSALIRMAGGFG
                     IFHFNKGATLKGKASDSDYMALMLIGAGPVYAVKCD"
     gene            2283..2945
                     /locus_tag="QEL58_001412"
     CDS             2283..2945
                     /locus_tag="QEL58_001412"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675893.1"
                     /translation="MKLQVAILMFIVSASAQAADGVPADKQAVDEAKAPARIVRSAEW
                     PDFIGGTVSVEQSLTRNSKGQYVYRYDDQSEATKQYHEASCADIGMNPAKGESITVGA
                     GSAAWHCSSIESSNVSDAKSTDYVIAYAPNGQVSAGQNFVSYGTVRFNSSVSGNIQGS
                     AQIDNGRCQTFYSEHYPPNTVGNHTARVLCFAHSAQTMNTLMEGCVPRACASDRGSII
                     AN"
     gene            3074..3916
                     /locus_tag="QEL58_001413"
     CDS             3074..3916
                     /locus_tag="QEL58_001413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012509897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HDS1675894.1"
                     /translation="MSHYTGPLLTRDSADTLRRAHDKGAADWQGSLDLGRSQDTVALD
                     ADGFHFRGQAYPWPGKLKDRTLYYWDGEEFAPISRYSGSLIKLVPTEWGAPTFEIDGI
                     KMLPTSKLSPFEDARRKVELVAPAGKVILDTCGGLGYFAACALEAGVGQIRSFEKNAD
                     VMWLRTLNPWSPDPDSAAAGGRLQFSHGDVSQQIEQVASNSVDAILHDPPRFGIAGEL
                     YSQVFYDHLARVIRKGGRLFHYTGAPNKLTSGRDVPREVAKRLEKAGFKAELALDGVL
                     AVKR"
     gene            complement(3920..4894)
                     /locus_tag="QEL58_001414"
     CDS             complement(3920..4894)
                     /locus_tag="QEL58_001414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010484166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HDS1675895.1"
                     /translation="MRALLRALPLLLLLLSLAVQAAEVDRRIAVTIDDLPWARVDEIV
                     PADLQARHAALMAQLRQAHVPVVGFVNENKLDVDGQVQPARVQMLRDWLDAGYVLGNH
                     TYSHMDLNAKGVAAFQQDFLRGETVLRPLLAERGQVPQWMRHPYLRAGRTAEERVQMD
                     EFFKQHGYRVAPVTVDNGEWVWAFAYANVMNEQPDSAAREATLAQLRKGYVPYMLNKL
                     DYYEQQSQALLGYALPQVWLMHANELNAATFAELVAATKRRGYRFVSLDEAMRDPAYA
                     RGAEGYNGRYGPSWLHRWAMAEKKPKDFYAGEPVVPKWVMQLAKVDSE"
     gene            complement(4936..5586)
                     /locus_tag="QEL58_001415"
     CDS             complement(4936..5586)
                     /locus_tag="QEL58_001415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014645753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675896.1"
                     /translation="MRSAASRLGRLFGPGVMVFLLQLVALLSLGLGASCFHSRVDLLL
                     VPVADGCGGPDPVARLRVAEQLLARAEALDDWQPLRWIPLVGTLLALLGAATVCALRA
                     MPQQHRLGTLRRGLVALHVGVLALAGWTLHLYEDAWSSVARLSPAACLVDLTEQGRMP
                     LAQAQQVVLHVLTREYAPLQRNPDDLAMMAVSLLVAAMVASIVLWRAAAKGMRTPT"
     gene            5720..6400
                     /locus_tag="QEL58_001416"
     CDS             5720..6400
                     /locus_tag="QEL58_001416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014645752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675897.1"
                     /translation="MVTLYLVVRTLLPLLAFALVAWGVSRLIKARVARLPPVPLNLPA
                     HSSSPRKKDRRLYARALRRRPSLRTATRPASAPRSWHLLGVTVAIAALAATVVAMPDG
                     ARFQVMVESVRGYPVTLAEVRVPAVAQAVVLQRWRPSLAPLARPVTMRYPIGRYGGDH
                     EARAWLPVQIRQLDDRLQVALPIAVDAVALQAELAQRAGLPAGAVSMRQAQVAPWMDA
                     GWEPLGDP"
     gene            complement(6428..6601)
                     /locus_tag="QEL58_001417"
     CDS             complement(6428..6601)
                     /locus_tag="QEL58_001417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014035791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675898.1"
                     /translation="MRKTETPPWKKPNPKGQKSQPLSPAQKEAARQRAEENGRPYPNL
                     VDNMWAAKLPREV"
     gene            complement(6611..7423)
                     /locus_tag="QEL58_001418"
     CDS             complement(6611..7423)
                     /locus_tag="QEL58_001418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004139652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDS1675899.1"
                     /translation="MPASRIRLHVEDTGGDGRPVILIHGWPLSADAWKTQVSILRDAQ
                     YRVISYDRRGFGRSEKPADGYDYDTLAADLAALIEERDLRDVTLVGFSMGGGEVARYV
                     ANHGEDRLHSVVFAAAVPPYLLKSDDNPDGPLTQDKADEMRSGLEKDRESFFDGFTRD
                     FFSADGKLMVTEEQRQAAIALCHQSDQTAALGCMQSFATTDFRDDLKKITVPTLILHG
                     DSDAIVPFEGSGERTHEAIAGSEVVILEGAPHGCNTSHADHFNLALLNFLKK"
     gene            7644..8123
                     /locus_tag="QEL58_001419"
     CDS             7644..8123
                     /locus_tag="QEL58_001419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014645749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4440 domain-containing protein"
                     /protein_id="HDS1675900.1"
                     /translation="MLLLTLPLLAAGLAAAPTAPDSLREQIRQADTQLFAAAFDACDA
                     DKAASMTTEDMEFFHDKAGKSASNRDDFRRSVAALCESNRANHTHLRRELVESSLQVF
                     PLHDERALEIGDHRFHERDAKGVERWTGQARFIQVWRRVDGQWQVERVISYDHRPAD"
     gene            complement(8202..8879)
                     /locus_tag="QEL58_001420"
     CDS             complement(8202..8879)
                     /locus_tag="QEL58_001420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017354819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1851 domain-containing protein"
                     /protein_id="HDS1675901.1"
                     /translation="MIEMLDKHFEYFYSDKGFGPAVETRQVPQSKLEHYRGKVPDRLL
                     EYWRAYGFAGYGKGIFWITDPDEYAEALNAWLYGTEFYGKDHYYVIGRSAFGNLTLWG
                     TKTGRSLTINCAWAMIFPTDKSRWMREGKADSLISTWLSGMSVDYPNEADDKGIPLFD
                     RAVKLLGPLNYDEMYGFVPALALGGSCRLEHLQKVNAAEHLLFLAQLGERRVMADIVA
                     EAKKRGV"
     gene            complement(8883..9566)
                     /locus_tag="QEL58_001421"
     CDS             complement(8883..9566)
                     /locus_tag="QEL58_001421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017354819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1851 domain-containing protein"
                     /protein_id="HDS1675902.1"
                     /translation="MIEMVDEEFELFYVDEGFGPAVDARPVSQSKLAHYQGKLPGRLL
                     EYWRAYGFSGYGRGLFWMTDPDDYSEVLKSWLYGTEFYGKDDYYVIGRSAFGDMEVLG
                     ARTGLRLTIDCKWAMIFPSDNSRWMSERGADFLVASWIAMMKRSRQDQTDERNQPLFD
                     RAEKLLGPLACDEMYGFVPALALGGACRLNHLKKVKAVEHLMFLAQLGERRVMGDIVK
                     EAKDRGLWK"
     gene            complement(9563..11416)
                     /locus_tag="QEL58_001422"
     CDS             complement(9563..11416)
                     /locus_tag="QEL58_001422"
                     /inference="COORDINATES: protein motif:HMM:NF026942.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006451293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAAR domain-containing protein"
                     /protein_id="HDS1675903.1"
                     /translation="MQRVVIVVGDRTTGGGEVLTGAPSTFINNIAIARVGDKASCPKH
                     GGFFDIVTGDETFLIDGQPLARHGDSLACGCRLLASRQSTVTVEAGGGTGPQAASPPS
                     GNAAPSAGFVPSGTSAHEPDVAPSSKQDILLHYHYGDLDRTPVRGVGYQVMLPDDRVV
                     TGQLDDAGRASIPDVVVGPVQTLQLLFQPDLSDDDDAPILAARAKLKSALDAIVAQTR
                     SDMATAWQQWDDAGALKRWGLQRGNQALGTGQGAWDYVVGTVETAVDLAVLMYRTDRE
                     IREWTRLLLTGDRDAMDRKIATMRAAGDTVMAAASEAKELFNLLIEDPAITQQLPAFA
                     VAWWDAVPPDEQENLQARFGAQIMMDVMVSILLAAVTVELGGAAGFGYAAAKAGRTAT
                     RIGSRLLHLMEEVEDAFKGLAKALKHRKRRQADGNRTPDGNRNVETPRLPRRMPRKQL
                     PCFSPQKLPASKYPEMDRQLKLQEQGLNDMSVEEYLAGRRAFDPKNRDKKAAQDARER
                     HRSKVEEEKFRELNTPDRSAREARRLAAEHADEQMRVLNALHNPDLIAGGKDRIDDFG
                     DGEVNQTIGRQWSRARKDQTTRVQELDEAARQVPVGERRSTRMNGGLERCR"
     gene            11821..12882
                     /locus_tag="QEL58_001423"
     CDS             11821..12882
                     /locus_tag="QEL58_001423"
                     /inference="COORDINATES: protein
                     motif:HMM:NF023524.1,HMM:NF024420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3578 domain-containing protein"
                     /protein_id="HDS1675904.1"
                     /translation="MELQSEYSSLATTVMNERGQIIKHQLPSILREDAEPLRAAADIA
                     QGDFLLEGGDGIGRKAQVPWVRFASRNRSPKATEGWYVVWLFREDGSGVYLALSHAST
                     KNVDGDFIKRSTDEAQRLTTWAREVLASDIPNDPRVHHSMTLGFGDLAKAYERTTVVS
                     YFYPKAEVPPDEQLRADMISMARRLKSIYRGEPAQKRSGQTSPDVIAVVEAIEEAASG
                     REKTGQGFGLTQPERRAVELRAMALAKSYFHGKGYAVEDTSSHAPYDLKIVKDSQTHY
                     VEVKGTTGGLGDIVLTKNEVQHHLNHHPNNALFVVYGIQLHTQNGTPIGTGGTDHVQQ
                     PWLISNDRLQPLAYRYRIE"
     gene            complement(12934..14079)
                     /locus_tag="QEL58_001424"
     CDS             complement(12934..14079)
                     /locus_tag="QEL58_001424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017356940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YncE family protein"
                     /protein_id="HDS1675905.1"
                     /translation="MFPHSALRSAALALAVSLSLGVPSAFADNAPAASASTAVQRQAV
                     AKGLYELAYSPKQNAVFVASSGGFGDDAGPAQVLRLNPTTLAVETRIPLERKAFGVVL
                     DDAHNRLYVGNTVDLSVTVVDTAQNKAIGTIQLMEKKTGKDGKAAYTHDLRELVVDSA
                     GNRLYVTGHSSQPDVSSVLFVIDTTTLKVINTIDGLGNAKAPGLALDAANKRVYTSNL
                     LADLVVVGTDSNKVVAQHKIAAEQPMNIALDPAGKRLFVTDQGSEFLRGYQAKSSGLV
                     SKHPGQRVLVLDRSTGKELASIPTDAGPLGILLDAPRKRLYVTNREAGTVTAYNSDSY
                     QKVATYKVPTHPNSLALDAKNNVLFVSIKNGEKDDKGADESVARIQL"
     gene            14313..14738
                     /locus_tag="QEL58_001425"
     CDS             14313..14738
                     /locus_tag="QEL58_001425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005407854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HDS1675906.1"
                     /translation="MPRLNAALALTLILMLLGAMPAVAMDTAPRISTEVFVEAGDNPT
                     FKLQQAPAVVHSTPPVTAADTLPQFPLQVLLVAQLDELGHVSNVMVARSSGQREFDRA
                     ALDAVDEWRFDPVVVEGVAKHARVRVRLIFTPESEAPAA"
     gene            15191..15559
                     /locus_tag="QEL58_001426"
     CDS             15191..15559
                     /locus_tag="QEL58_001426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012509878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675907.1"
                     /translation="MSATKLPDVNTRRDPANADHEKDPSPYPLGFIANLHRIGAGAAA
                     DGQPWPERNLSLGRSMQMADADCALGGLRVVAELMLAAERTRQNGTDEEYVGDRVMEG
                     LKMACVALTVMATERVQGRG"
     gene            complement(16425..18383)
                     /locus_tag="QEL58_001427"
     CDS             complement(16425..18383)
                     /locus_tag="QEL58_001427"
                     /inference="COORDINATES: protein motif:HMM:NF024977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HDS1675908.1"
                     /translation="MKLDFRVLEHLGIRLYSNVAAVISELVANGWDAQAEKVTIDFDE
                     AKGRLVIADDGIGMNVDDINDKFLTVGYDKRKTEGGVAKNGRKFMGRKGIGKLSVFSV
                     AEVVKVFSTRDGVSSAFELRLKDLERDIKASGIYHPLEIPFPDDTPKKGTVLEMSSLQ
                     VKRTSITVNALRKRLARRFSVIGFVSSTGDAFDVLVNGVKIGHQDRDDLRSLEYMWEF
                     GAKTVADAATPVVAGKYVIADNIVAANPAWQVTGWFGTAKKPAQLEGEESGSLKNIVV
                     LARGRLIQESILDKLGFNRIFGSYVTGQIQADFLDTDQEEDIATSDRQRLVEDDHRVM
                     ALRSFMRKALLDASEKWSEVRKHQKAEEAQLARPALKGWVDGLPKEQQVPAKSLIGLI
                     EGLPLDDEREQDRAELFRSGVLAFERLRLKEAAHRLENLSVLSADHLLPLLMNQEYYE
                     ASLYGDIVKSRVEAIRKFRDLADAQAKEKVLQEHLFKNLWLLDAGWERASGSETMERQ
                     LRTHFPRDFADNLTDEESKGRIDIKYRSNAGVHIIVELKKYERAMTLDQLNEQGHKYL
                     AAMTKLCNNAGETQPRIEVVFVLGKAVPTSAGLPHNYVEESLRVWGARIAFYDTLIEG
                     ALAAYSDYLKANESLDRVGEVVRALSSE"
     gene            complement(18424..19485)
                     /locus_tag="QEL58_001428"
     CDS             complement(18424..19485)
                     /locus_tag="QEL58_001428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011097701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HDS1675909.1"
                     /translation="MIPCMTKKVPKINAIDLFCGLGGLSYGLKKAGVKVLAGFDIDET
                     CRYAFEKNVKAPFHCKDIKQVTAAEIKRIFPKEGVRLLAGCAPCQPFSSYRRGSDTKQ
                     DIKWPLLDEFRRLVEAVKPDLVTMENVPGIGSTDVFVRFVDSLKSYGYHVSFQSCFGP
                     RYGLAQRRRRLVLVGSRLGPIAAPEGSVQEEDFLSVRDVIGRLPKVQSGQVDKVDPLH
                     KARTLSPINLARIQASIPGGTWRDWPKSLRAPCHLKDSGSSFQSVYARMSWDEPAPTI
                     TTQAFSFGTGRFGHPEQDRALTLRECAMLQGFPREYIFIEKGGAVEFLPLGRLIGNAV
                     PPPLGAAIGRQFVGHIKSL"
     gene            complement(20310..22997)
                     /gene="aceE"
                     /locus_tag="QEL58_001429"
     CDS             complement(20310..22997)
                     /gene="aceE"
                     /locus_tag="QEL58_001429"
                     /EC_number="1.2.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase (acetyl-transferring),
                     homodimeric type"
                     /protein_id="HDS1675910.1"
                     /translation="MNWLNEVLNNDPNPVETQEWIESLKAVIDVEGSERAHQLLEGMV
                     ELTRRSGAYLPFSPTTEYVNTIEPQLEAKSPGNAELEWRIRSIIRWNAMATVVRANRK
                     PGDLGGHIASFASGATLYDVGFNHFWRAPSENHPGDLLFIQGHSAPGIYARSFLEGRI
                     SEEQLDKFRMEVDGGGLSSYPHPWLMPDYWQTPTVSMGLGPLAAIYQAQFMRYLENRG
                     LIEKSDRKVWCFIGDGESDEPETLGAIALAGREGLDNLIFVVNCNLQRLDGPVRGNGK
                     IIQELEGVFRGGGWNVIKLLWGGYWDALLAKDSDGVLKKLMMETVDGEYQNCKAFGGA
                     YTREHFFGKYPETAAMVAGLSDDDIWRLNRGGHDPHKVYAAYHQAVNTKGMPTVILAK
                     TVKGYGMGSAGEALNPTHQTKKLDDEAVRHFRDRFNIPVTDAQLADGQVPFYHPGPDS
                     PEVQYLQERRAALGGYLPQRRRKADKTFVAPKLEAYDRLLKSSGERSYSTTMAFVQSL
                     NITLRDKELGPHIVPIVADEARTFGMEGLFRQIGIYAPFGQKYKPVDADQLMFYREDQ
                     SGQVLQQGISEPGAISSWMAAGTSYSVSNVPMLPFYIYYSMFGFQRVGDIAWQAADMR
                     TRGFLLGGTAGRTTLNGEGLQHEDGFSHLVAGGIPNVRSYDPTFGFEVTVVLQHGTKR
                     MMEDQVDEYYYVTLMNENYTHPEMPEGAAEGIVKGMYLLTDAGKPKKGELRVQLLGSG
                     TILREAIAAAELLDKDFGVTADIWSCPSFNELRRDGFDVERANRLHPEGEQRKAYVTE
                     LLEGRQGPAIAATDYVRAYADQIRAFVPMSYTVLGTDGFGRSDTRANLRRFFEVDRYY
                     IAHAAIAALAKEGKMTAKDVARAIKQYKIDPEKANPVGV"
     gene            23542..24102
                     /locus_tag="QEL58_001430"
     CDS             23542..24102
                     /locus_tag="QEL58_001430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012478969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDS1675911.1"
                     /translation="MSRTPSPRARSTDPAVPRRNGQPRVLSRGDLRLLVLALIGEQPR
                     HGYELMQLISNQFMQAYTPSAGTMYPLLASFEQAGWIEAEEVDGKRIFRITAAGEFEL
                     KVQRTQVRLAQRRAFDRAREITKASLPPPLATALREFKRALVHHHGRWAEGEADEVAA
                     LLTRASALLNGTAGSETSPLSTTQPD"
     gene            24163..24960
                     /locus_tag="QEL58_001431"
     CDS             24163..24960
                     /locus_tag="QEL58_001431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005407840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="siderophore-interacting protein"
                     /protein_id="HDS1675912.1"
                     /translation="MTEHNNTRLRLDVRFRELTVLRTEEVTPHMRRVVLGGDDLAGFD
                     SPGADDHIKLFFPNAAGEMVLPVLTAEGRSYPAGKEPSPARDYTPRWWDHETGELAID
                     FVLHDQGIAGPWAEQAQAGDVLVIGGPRGSFVVADSYDAYVLIGDETALPAIARWLDV
                     LPDGAEVQAFIEVSDEAERQDLPQYENVRIHWLERNGFPAASSTLLEDMLTDFEAPDG
                     DVFYWIATESRRARMMRKFIEGHLGVPRDWIRSTGYWKAHPDETDGD"
BASE COUNT         4667 a         8123 c         7361 g         4848 t
ORIGIN      
        1 gcagctccac cagcacctcg gcctcggccg cgcgctgctg cggatcttcc gcgcccacca
       61 catgctcctg caggtgctcg tgcagcagct ccatcagcag gctgtgggcg gcgccgcgca
      121 ccgcggcgac ctgtaccagc acgtccgcgc agtcgccggc ctggccttcg ggccggtcca
      181 gcgcctgctc caacgccgcc acctggccgc cgatacggcg tacccgggtc agcagctgct
      241 ttcggttctt gtgtacatgc gccatggccg gatcatatac cctatggggg tatattctct
      301 accccttggg tctgacatgc acctggacac cctcgccgcc gcccgtcgcc acgaacaccg
      361 cttcgacgac ggcaacccgc tggccgaacg caacacccgc cgcgccctgt ggctcaccgt
      421 cggcatgatg ctggtggaga tcgtcggtgg ctggtggttc aactccatgg ccgtgctcgc
      481 cgacggctgg cacatgagtt cacacgcgct cgcgctgggc ctgtcggtgt tcgcttaccg
      541 ctgtgcgcgc cgctatgcaa acgacccgcg cttcgccttc ggcacctgga agatcgagat
      601 cctggccggc tacaccagtg ccatcgcact gctcggtgtt gcggcgctga tggccgtgca
      661 atcgctgcaa cggctgtggg taccggcgcc gatccactac gatgaagcca tcgccatcgc
      721 ggcggtcggc ctgggcgtga acctgctgtg cgcatggtgg ctgcacgaca gcccgggcca
      781 cgcgcatcac caccacgggc acggccacga tcatcgcgaa cacaacgggc atgatcacga
      841 ccataacggc catgcgcacg gtcacgacct caacctgcgc tcggcctacg tgcacgtgct
      901 ggccgacgcc gccacctcgg tgctggccat tgtcgcgctg ctcggcggca agctgctggg
      961 cctgacctgg ctggacccgg tgatgggact ggtcggcgcg gtgctggtca cggtgtgggc
     1021 gatcggtctt ctgcgcgaca gcgggcgcat cctgctcgac gcgcagatgg acgcgccggt
     1081 ggtggccgaa gtgcgcgaag tgatcgagca gggcccgtgg ccggcacgcc tggccgacct
     1141 gcacgtctgg caggtcggcc gcggcaagta cgcggtcagc gccagcgtgg tcaccagcga
     1201 tgcccgcctg gatgccgata ccgtgcgcaa cgcgctggcg atccatgaag aactggtgca
     1261 cgtgacggtg gagatccacc gcagctgatc acccgcctcg ggtaatgccg gccgctggcc
     1321 ggcaacctca tgaagcctgc actccacctg ctgctgccgg ccagcggccc gccctaccgc
     1381 tagagcttca gcatcatccg cagcaggtac atcagcagcg gcagcgcgct cacgaccgca
     1441 ccggcaatgc cgatccacgg ccaacgctcg ccgcgcacgc gcgatgccac ggcaaagccg
     1501 gcacccacca gcgccgcacc cagcaccgcc acgcccatcc ccgcggccag gccattgcca
     1561 ccggccgcca ccgccgcctg cgcggccatt gtgcccgcac cccagccgac caccatgccc
     1621 agccaactgg ccacgccgca ccacggtgcc ttgccctgcg ccatccgaaa acccctcttc
     1681 tcttgccgaa ttcctgtacg ggccgtgccc gcatgctgcc tacactagcc acacctgccc
     1741 cgtagggaca tcccatgcgc acgctccgcc tgctgctgcc cggtgccctc ctgctgctca
     1801 ccgcctgtag cggtgatgcc gggcttccct tctcggccga tcccctgcag ggctgtttcg
     1861 ccaccagcgc gcgcaagccc gccgacttcc gcatcgagaa ggaaggcggc cagtacttcg
     1921 tgtccttcaa ccgcgatggc cagtggcagc gcgaaccgaa tgccttgcac aaggccagca
     1981 acagcgagat cagccgctac ttccgcgacg acgccgcgca gatcgacagc gccctgatcc
     2041 gcatggccgg gggcttcggc atcttccatt tcaacaaggg cgccacgctg aaaggcaaag
     2101 ccagcgacag cgactacatg gcgctgatgc tgatcggcgc cgggccggtg tatgcggtga
     2161 agtgcgatta gcgacactga attttgagga atatttgaaa ttcgagtaac tgcgtgatgc
     2221 gacccaatgc accattgggt gaatggagaa gatggggcct cacccagact ggagaggcca
     2281 gaatgaagtt acaggtagcc attctcatgt tcatcgtctc tgcatccgcg caggcagccg
     2341 acggagttcc agctgataag caagccgttg acgaagcgaa ggccccggcg agaatcgttc
     2401 gcagcgcaga atggcctgac ttcatcggag gaacggtcag tgtggagcag tccctcaccc
     2461 gcaactcgaa gggacagtat gtctatcgct acgatgatca atcggaagca acgaagcagt
     2521 atcacgaggc ttcgtgtgca gatatcggga tgaatcccgc caagggcgag tccatcacgg
     2581 tgggggcagg aagcgccgcg tggcattgct caagcattga gtcgagcaat gtcagcgacg
     2641 caaagagtac tgactacgtg atcgcctatg cacccaatgg acaggtatca gccggccaga
     2701 acttcgtttc ctacggaacc gtaagattca acagctcagt cagcgggaac atccagggta
     2761 gcgcgcaaat cgacaacgga aggtgccaga ccttttatag cgagcattac ccacccaaca
     2821 ctgtgggcaa tcacaccgca agagtcctgt gcttcgcaca ctccgcgcag acaatgaata
     2881 cgctgatgga aggttgcgtg ccgcgcgcct gcgccagcga tcgtggctcc atcatagcca
     2941 actgatacca aaaccctttg acctggcggt gagggtaacc aagccgccct ttgagcctgc
     3001 accacggaat ctcagtaccc tggtcaaggc cctgcggtac catgccctcc cccgaaccgc
     3061 cccggtaccc accgtgtccc attacaccgg ccccctgctg acccgcgaca gcgccgacac
     3121 cctgcgccgt gcccatgaca agggcgccgc cgattggcag ggctcgctcg atctcggccg
     3181 cagccaggac accgtggcac tggatgcgga cggcttccac ttccgcggcc aggcctaccc
     3241 gtggccgggc aagctgaagg accgcacgct gtactactgg gatggcgagg agttcgcgcc
     3301 gatctcgcgc tacagcggct cgctgatcaa gctggtgccc accgagtggg gcgcgcccac
     3361 cttcgagatc gacggcatca agatgctgcc gacctccaag ttgtcgccgt tcgaggacgc
     3421 acgccgcaag gtcgagctgg tcgcgccggc cggcaaggtc atcctcgata cctgcggcgg
     3481 cctcggttac ttcgccgcct gcgcgctgga ggccggcgtc ggtcagatcc gttcgttcga
     3541 gaagaacgcc gacgtgatgt ggctgcgcac gctcaacccg tggtcgccgg acccggactc
     3601 ggccgccgcc gggggccgcc tgcagttcag ccacggcgac gtctcacagc agatcgagca
     3661 ggtggccagc aacagcgtcg acgcgatcct gcacgacccg ccgcgtttcg gcattgccgg
     3721 cgagctgtac tcccaggtgt tctacgatca cctcgcccgc gtcatccgca agggcggccg
     3781 cctgttccac tacaccggcg cgccgaacaa gctgaccagc ggccgcgacg tgccgcgcga
     3841 agtggccaag cggctggaaa aggccggttt caaggccgag ctggcactgg acggcgtact
     3901 ggccgtcaag cgctgaaccc tattccgaat ccaccttcgc caactgcatc acccacttcg
     3961 gcaccaccgg ctctccggca tagaagtcct tcggtttttt ctccgccatc gcccagcggt
     4021 gcagccagct gggaccgtag cggccgttgt agccttcggc gccacgcgca taggctgggt
     4081 cacgcatcgc ctcgtccagc gacacgaagc gatagccacg ccgcttggtc gccgccacca
     4141 gttcggcaaa cgtggccgcg ttgagctcgt tggcgtgcat cagccacacc tgcggcagcg
     4201 catagcccag caatgcctgc gactgctgtt cgtagtagtc cagcttgttc agcatgtacg
     4261 gcacatagcc cttgcgcagc tgtgccagcg tcgcctcgcg cgcggccgaa tcgggctgct
     4321 cgttcatcac gttggcatag gcgaacgccc acacccactc gccgttgtcg accgtcaccg
     4381 gcgccacgcg gtagccgtgc tgcttgaaga actcgtccat ctgcacgcgc tcttccgcag
     4441 tacgcccggc gcgcaggtag gggtggcgca tccactgtgg cacctgccca cgctcggcca
     4501 gcagcggccg cagcaccgtt tccccacgca ggaaatcctg ctggaacgcc gccacgccct
     4561 tggcgttcag gtccatgtgc gagtacgtgt ggttgcccag cacatagccc gcgtccagcc
     4621 agtcgcgcag catctgcacg cgcgcaggct gcacctgccc gtccacgtca agcttgttct
     4681 cgttgacgaa gcccaccacc ggcacatgcg cctggcgcag ctgcgccatc aacgcggcat
     4741 gccgcgcctg caggtctgcc ggcacgatct cgtccacccg cgcccagggc aggtcatcga
     4801 tggtcaccgc aatgcgacga tccacctcgg ccgcctgcac cgccagcgac agcaacagca
     4861 gcagcaacgg cagggctcgc aacaacgcac gcatcagcac ttccttgtcg gggcaatgcg
     4921 tggactgtaa cgcgatcagg taggcgtccg catacccttg gccgccgcac gccacagcac
     4981 gatactggcc accatcgcgg ccaccagcag cgataccgcc atcatcgcca gatcatccgg
     5041 gttgcgctgc aacggggcgt actcgcgggt gagcacgtgc agcaccacct gctgggcctg
     5101 tgccaacggc atccggccct gctcggtcag gtccaccagg catgccgccg gcgacagcct
     5161 tgccacgctg ctccacgcat cctcgtacag gtgcagtgtc caccctgcca acgccagcac
     5221 gcccacatgc agcgccacca gccctcggcg gagcgtaccc aggcggtgct gttggggcat
     5281 ggcacgcagc gcacagaccg ttgccgcgcc gagaagcgcc agcagcgtgc ccaccagcgg
     5341 aatccagcgc agcggttgcc aatcatccag cgcttccgcg cgcgccagca gttgctcggc
     5401 cacgcgcagg cgcgccaccg gatcgggacc accgcagcca tccgccaccg gcaccagcag
     5461 cagatccacg cgggagtgga agcagctggc ccccaggcca agcgacagca gcgccaccag
     5521 ctgcaacaga aacaccatca cccccggccc gaacaggcgg ccgaggcggg aagcagcaga
     5581 gcgcatcgat tcatccatga caacaacgcg ccatgctatc cagccacacc accgctgtcg
     5641 gctggcagat gcgacaacag ctggcgccta tcggtaggat gtcgattgaa gtggatgcat
     5701 atgtgaggac gtgcacagga tggtgacgtt gtacctggtg gtgcgaacac tgctgccact
     5761 gctggcattc gcactggtgg cgtggggggt gtcacgcctg atcaaggcgc gcgttgcccg
     5821 cttgccgccg gttccgctga acctgcctgc gcacagcagc agcccgcgca agaaggaccg
     5881 acgcctgtac gcacgtgcgc tgcgtcgccg gcccagcctg cgcaccgcaa cccgccccgc
     5941 cagcgcaccg cgcagctggc atctgctggg cgtgacggtg gcgatcgcgg cgttggccgc
     6001 cacagtggtg gccatgcccg acggcgcacg cttccaggtg atggtcgaga gcgtacgtgg
     6061 ctacccggtc acgctggccg aagtccgcgt tccggcggtt gcacaggccg tggtgctgca
     6121 gcgatggcga ccctcgcttg cgccgctggc gcgcccggta acgatgcgct atccgatcgg
     6181 ccgctacggc ggcgaccatg aagcgcgcgc atggcttccg gtgcagatcc gccagcttga
     6241 cgatcgattg caggtggccc tgcccatcgc cgtggatgcg gtggcattgc aggccgagct
     6301 ggcacagcgg gcgggcctgc cagccggtgc ggtttcgatg cgccaggcgc aggtagcgcc
     6361 ctggatggac gccggctggg aaccgctggg cgacccgtag agccgagccc gcgctcggct
     6421 gccaggctta cacctcgcgc ggcagtttgg ccgcccacat gttgtcgacc agattcgggt
     6481 acgggcgacc attctcctcc gcccgctgcc gcgccgcctc cttctgggca ggcgacagcg
     6541 gctgggattt ctggcccttg gggttgggct tcttccacgg cggggtttcg gtcttgcgca
     6601 tggcgccagc ttacttcttc aggaagttca gcagcgccag attgaagtga tcggcgtggc
     6661 tggtgttgca gccatgtggc gcgccttcca ggatcaccac ctcgctgcct gcaatggcct
     6721 catgcgtgcg ctcccccgag ccttcaaacg gcacgatggc gtcgctgtca ccgtgcagga
     6781 tcaaggtcgg cacggtgatc ttcttcaggt cgtcgcggaa gtcggtggtc gcgaaagact
     6841 gcatgcagcc cagcgccgcc gtctggtcgg actggtggca cagcgcgatc gccgcctggc
     6901 gctgctcttc ggtcaccatc aacttgccat cggcgctgaa gaagtcgcgg gtgaagccat
     6961 cgaagaagct ctcgcggtcc ttctccaggc cgctgcgcat ctcatcggcc ttgtcctggg
     7021 tcaacggccc gtccgggttg tcgtcacttt tcagcaggta aggcggcacg gcggcggcga
     7081 acaccacgct atgcaagcgg tcctcaccgt ggttggccac atagcgcgcc acctcaccac
     7141 cgcccatcga gaagccgacc agcgtgacat cgcggaggtc gcgctcttca atcagcgcgg
     7201 ccaggtccgc cgccagcgtg tcgtagtcgt agccgtcggc gggcttctcg gagcggccga
     7261 agccgcgacg gtcgtagctg atcacccggt actgggcatc gcgcaggata gacacctgcg
     7321 tcttccaggc atcggctgac agcggccagc cgtggatcag gatgaccggg cggccatcgc
     7381 cgccggtgtc ttcaacgtgc aggcggatgc gggaggcagg catgggggct cctgtggaag
     7441 ggaagagttg caggctagaa ccccgcccct atgccgcccg tgagggaatc gcggcgcgct
     7501 gtgacacggc gtgcacaggc tgaagggacg cccgccccgc cagataccag tttcatcgcg
     7561 tccagcgccg gtttcgtcgc agcacggcgg cagggtgcgg tggggcgtgc cagcctgcgc
     7621 ggaccacttc cgggagattc gccatgctgc tgctcaccct gcccctgctg gccgccggcc
     7681 ttgccgctgc cccgaccgcg ccggacagcc tgcgcgaaca gatccgccag gccgatacgc
     7741 agctgttcgc cgccgcgttc gatgcctgcg acgccgacaa ggccgcgtcg atgaccaccg
     7801 aagacatgga gtttttccat gacaaggccg gcaagtccgc cagcaaccgc gacgacttcc
     7861 ggcgcagcgt ggccgccctg tgcgaaagca accgcgccaa ccacacgcac ctgcgccgtg
     7921 agctggtgga aagttcgctg caggtgttcc cgctgcacga cgagcgggcg ctggagatcg
     7981 gcgaccaccg cttccacgag cgcgatgcga agggtgtgga gcgttggacc ggccaggcgc
     8041 gcttcatcca ggtctggcgg cgggtggatg ggcagtggca ggtggaacgg gtgatcagct
     8101 atgaccatcg gccggcggat tgaggggcgc ggcgtgatgt agagccgagc ctacgctcgg
     8161 ctgtggttcg gtggatggat tagccgtcct gacccgctgg ttcacacccc tcgcttcttg
     8221 gcctcagcca cgatgtcggc catgacccgg cgttctccca gctgggcgag gaacaacagg
     8281 tgttcggcgg cgttgacctt ctgcagatgt tcgaggcggc atgacccacc gagtgcaagc
     8341 gccgggacga agccatacat ctcgtcatag ttcagtgggc ctagtagttt cacggcgcgg
     8401 tcaaagaggg ggatgccctt gtcatcggcc tcattcggat agtcgacact catcccagac
     8461 agccacgttg aaatcagaga atctgccttc ccttccctca tccagcgaga tttgtcggtg
     8521 ggaaagatca ttgcccatgc gcagttgatg gttaggctac gcccggtctt ggttccccac
     8581 agtgtcaagt tcccgaaggc gctgcggccg atgacgtagt agtgatcctt cccatagaac
     8641 tcagttccat agagccaggc attgagggct tcggcgtatt catccggatc agttatccag
     8701 aagatgcctt ttccgtaacc agcaaagccg tacgcccgcc agtattccag tagcctgtct
     8761 gggaccttcc cccggtagtg ctccaacttc gattgcggca cctgtcttgt ctcaacggcg
     8821 ggtccaaagc ccttgtctga gtagaagtac tcaaagtgct tgtcgagcat ctcgatcacc
     8881 ggctacttcc aaagcccacg atctttggcc tccttcacga tgtcccccat cactctgcgc
     8941 tctccaagct gggccaggaa catcaagtgc tcgacagcct tgaccttttt aagatggttg
     9001 agacggcatg ccccgcccaa ggcgagtgct gggacgaagc catacatctc gtcgcacgcc
     9061 agcggaccca gcagcttctc tgctctgtcg aaaaggggct ggttcctctc gtcggtttga
     9121 tcctggcggg accgcttcat cattgctatc cacgatgcca ccaggaagtc cgctcctcgc
     9181 tcactcatcc agcgtgagtt gtcgctcggg aagatcattg cccatttgca gtcaatggtc
     9241 agcctgagtc ctgttcttgc ccccagcact tccatatcac cgaaagcact tcgaccaatg
     9301 acgtagtagt cgtcttttcc atagaactcg gtcccgtaca gccagctctt cagaacctcg
     9361 gaatagtcat caggatcagt catccagaac agtccacggc cgtaaccgga aaagccatac
     9421 gctctccagt actccagtag cctccctggc agctttccct ggtaatgagc cagtttcgat
     9481 tgggacaccg gccgcgcgtc cactgctggt ccgaagcctt cgtccacgta gaagagctcg
     9541 aactcttcgt cgaccatttc gatcatctgc atcgctccag cccgccgttc attctggttg
     9601 accttctctc gcccactggc acctgccttg ccgcttcgtc caactcctga acccgcgtag
     9661 tctgatcctt cctggcacga ctccattgcc ggccaatggt ttgattgacc tctccatcgc
     9721 cgaaatcatc aattctgtcc ttgccacctg caatcagatc aggattgtga agcgcattta
     9781 gaaccctcat ctgctcatcg gcatgctccg ccgccagtcg cctcgcttcc cttgctgagc
     9841 ggtccggggt gttcagttct ctgaacttct cttcctcaac cttgcttctg tgcctctccc
     9901 ttgcgtcttg agcggccttc ttgtctcggt tcttcggatc aaaagctctt ctgccagcaa
     9961 ggtactcctc cacactcata tcgttcagcc cctgctcctg caacttcaac tgccgatcca
    10021 tctccgggta cttcgatgct ggcagcttct gcgggctgaa gcacggcagc tgcttccgcg
    10081 gcatgcgcct gggtagccgt ggcgtctcca cattccgatt gccatcgggc gtgcggttgc
    10141 catctgcctg tcggcgcttg cggtgcttca gcgccttggc caatcccttg aacgcgtcct
    10201 ccacttcctc catcaggtgc agcagtcgcg agccgattcg ggtggctgtt cgcccggcct
    10261 tggcggccgc gtagccaaac cccgccgcgc cccccagctc caccgtcacc gcggccagca
    10321 ggatggagac cattacatcc atcatgatct gcgcgccgaa acgcgcctgc agattctctt
    10381 gttcgtccgg tggcaccgcg tcccaccagg ccacggcgaa ggccggtagc tgctgggtga
    10441 tggccggatc ttcgatcagc aggttgaaca gctccttggc ttcgctggca gccgccatca
    10501 ctgtgtcgcc cgccgcgcgc atcgtggcga tcttgcggtc catggcatcg cggtcgccgg
    10561 tcagcagcag gcgcgtccat tcgcgtatct cgcggtcggt cctgtacatc aacaccgcca
    10621 aatcgacggc ggtctcgacc gttcccacca cgtagtccca ggcgccctgc ccggtgccca
    10681 gcgcctgatt gccgcgctgt aggccccagc gcttgagcgc gcctgcgtcg tcccactgct
    10741 gccatgccgt ggccatgtcg ctacgggtct gcgcaacgat cgcgtccagc gctgacttga
    10801 gcttcgcgcg cgccgcgagg atgggcgcat cgtcgtcatc gctcaggtca ggctgaaaca
    10861 gcagctggag cgtctgcacc gggccaacaa caacgtcagg gatgcttgcg cggcctgcgt
    10921 catccaactg gccggtcact acccgatcgt cgggcagcat cacctggtag cccacgcccc
    10981 gtaccggcgt gcgatcgaga tcaccgtagt ggtagtgcag caggatgtcc tgcttgctgg
    11041 acggcgctac gtcaggctca tgcgcagagg tgcccgaggg tacgaatcct gctgacggtg
    11101 cggcgttgcc agacggtggg gacgccgctt gcggcccagt gcctccgcct gcttccacgg
    11161 tcaccgtgct ctggcgcgag gccagcaggc ggcaaccgca ggccagcgaa tccccgtggc
    11221 gggccaacgg ctggccatca atcaggaagg tttcatcgcc ggtgacgatg tcgaagaagc
    11281 caccgtgctt cgggcaactg gccttgtcgc ccacgcgggc gatggcgatg ttgttgatga
    11341 aggtgctggg cgcaccggtc aacacctcgc caccaccggt agtgcggtcg ccgaccacga
    11401 tcacgacccg ctgcatgtgc gctccctcgc ttgatgctgg ggagggaggc tagtgagcgg
    11461 ttataggcgc cgggcgggaa aagcgggttt ttgcaagtag tcctagtgtg atcgcggcta
    11521 tcagggtgat ctgactctct aaaggctctt ccgactgccc ggcaaacagg ccgatcccga
    11581 cgagcatcca tgatgcatag ctgcgtcctc atcgtctccg cactagatcg gcggactcac
    11641 gctctaggcc cggtgtccgc gtagcccgaa agcctcagaa cgccggcccg cgactatccc
    11701 cgtcgcaatc aacaccacct tgatacgcat tgcagatgga taggccggca tgcattaatt
    11761 gcgcctatcg aaaaccgtgc ggggtctggg atggggatca gggaagagtt gcggagggtc
    11821 atggaactgc aatctgagta cagctcgctg gccaccaccg tcatgaacga gcgcggccag
    11881 atcatcaagc accaacttcc ctccatcctt cgagaagatg ctgagccgct tcgcgccgca
    11941 gcagatatcg cgcaaggtga ctttctgctt gaagggggag atggcatcgg cagaaaggcg
    12001 caggtgccgt gggtgcggtt tgcatcgcga aatagatcgc ccaaggccac tgagggctgg
    12061 tacgtggtgt ggctgttccg ggaagacggc tccggggttt acctagcgct ctcgcatgcc
    12121 tccaccaaga acgtcgatgg tgacttcatc aagcgatcta ccgatgaagc ccagcgcctg
    12181 acaacgtggg cgcgtgaggt tctggcgagc gatattccca acgatccgcg cgtccaccat
    12241 tccatgaccc ttggctttgg ggacctggca aaggcttacg agagaaccac cgtagtttcg
    12301 tacttctatc cgaaggcgga ggtaccgccc gatgagcaac tgcgagctga catgatctct
    12361 atggcgcggc gcctgaagag catctatcgc ggtgaacccg cacagaagcg cagcgggcag
    12421 acctcaccag acgtcattgc ggtggtagag gccatcgagg aggccgcttc aggtcgcgag
    12481 aaaacaggcc aaggctttgg gcttacgcaa ccggaacgcc gtgcggtaga gctacgcgcg
    12541 atggcactgg ccaagagcta cttccatggc aaaggctatg cggttgagga caccagtagc
    12601 cacgcgcctt acgacctgaa gatcgtcaaa gacagccaaa cacactacgt cgaggttaag
    12661 ggcacaaccg gtggactggg cgatattgtg cttacgaaga acgaggttca gcatcatctg
    12721 aaccatcatc ccaacaacgc cctgttcgtt gtttacggca ttcagctaca cacacagaac
    12781 ggcacgccca ttggaacggg tggcactgac cacgttcaac agccctggct gatctcgaat
    12841 gatcgcctgc aacctctggc ctatcgctac cgcatcgagt gaaagagggc ccgaacggcc
    12901 ccgccacatt aggacggggc cgtaccttgt gccttacaac tgaatccgcg ctacgctctc
    12961 gtcagcgccc ttgtcgtcct tctcgccgtt cttgatgctc acgaacaaca cgttgttctt
    13021 cgcatccagt gccaggctgt tcgggtgggt cggcaccttg taggtggcca ccttctggta
    13081 gctgtcactg ttgtacgccg tcaccgtacc ggcttcgcgg ttggttacgt acaggcgctt
    13141 gcgcggtgca tccagcagga tgcccagcgg gccggcatcg gtcgggatgc tggccagttc
    13201 cttgccggta ctgcggtcca gcaccagcac gcgttggccc gggtgcttgc tcaccaggcc
    13261 gctgctcttg gcctggtagc cacgcaggaa ttccgagccc tggtcggtca cgaacaggcg
    13321 cttgccggcc gggtccagcg cgatgttcat cggctgctcg gcggcgatct tgtgctgtgc
    13381 caccaccttg ttcgaatcgg tgcccaccac caccaggtcg gccagcaggt tgctggtgta
    13441 gacgcgcttg ttggccgcat ccagcgccag gcccggcgcc ttggcgttgc ccaggccgtc
    13501 gatggtgttg atcaccttca gcgtggtggt atcgatcacg aacagcacgc tgctcacgtc
    13561 cggctggctg ctgtggcctg tcacgtacag gcggttgccg gcgctgtcca ccaccagctc
    13621 gcgcaggtcg tgggtgtagg cggccttgcc gtccttgccg gtcttctttt ccatcagctg
    13681 gatggtgccg atggccttgt tctgcgcggt gtccaccacg gtcaccgaca ggtccacggt
    13741 gttacccacg tacaggcggt tgtgggcgtc atccagcacc acgccgaacg ctttgcgctc
    13801 cagaggaata cgggtttcca cggccagcgt ggtcggattc aggcgcagca cctgggccgg
    13861 gccggcatca tcgccgaagc caccggacga ggcgacgaac acggcgttct gtttcgggct
    13921 gtaggccagt tcgtacaggc ccttggccac ggcctggcgc tgcacggcgg tgctggcgct
    13981 ggcagcgggg gcgttgtcgg cgaacgcaga cggcacgcca aggctgagcg agacggcaag
    14041 ggccagggcg gccgagcgga gagcggaatg agggaacatg cgagcatcct tgaaagggca
    14101 cgggagggtg tcctggctcg ctgggccgta ctgcgacggc ccgctccggc gcggtttgcg
    14161 cggggtgggc tggctgggtt gcggggggaa tgttaacagg tggggggcgt ggcgtgcgtc
    14221 tgcgcgcgta tggcaggcgc gcggaatcgg cattcagatc gctgcgtgga ggcgggcgct
    14281 atgctgttac cgcaccggaa tggaaaccac gcatgccccg tttgaacgcc gccctggcac
    14341 tgaccctcat tctgatgctg ctgggcgcta tgcctgctgt ggccatggat acagcccccc
    14401 gcatttccac agaggtgttt gtagaggcgg gagacaaccc caccttcaag ctgcagcagg
    14461 cgcctgcggt tgtgcattca acgccaccgg taacagccgc cgatacgctg ccgcagtttc
    14521 ccctgcaggt gctgctggtg gcccagctgg atgagctggg ccacgtgtcc aacgtgatgg
    14581 tggcgcggtc cagcgggcag cgggagtttg atcgtgcggc gcttgatgcg gtggatgagt
    14641 ggcgcttcga tccggtcgtg gttgagggcg tcgcgaagca tgcgcgggtt cgggtgcgtt
    14701 tgatctttac gccggagtcc gaggcgcctg cggcctgaac cgctggtcca gcctgtcgta
    14761 actgacctgc atcgcaggcg tagccgcggg catttctgtg ctttgggtca aaaacgccaa
    14821 gtccttcaag accattgcgg cgcaacagct tgccccctta acaccgtgtg cgacaatgcc
    14881 gaaagcgtca ggaccggcaa tcgccggttc tgcagtttct tggcatttgg cagctgcgcg
    14941 ggtatctctt ggcgtgccac cgaaaaaggg tggcgcggga ctcgaaaacc cgtttctgta
    15001 ccagctgtat gcgctttgcc agccggcgtc accctttgtg tgacgtcggc tggcaatccg
    15061 ttcgcgttct atggcggacg gtgcgtgggg gtcttcggac ccgccggtct ggtacttacc
    15121 ggttttcgag cccgcaccgt ccgccacctt tatcggtggc cctgctttct gtcctgtacg
    15181 gagcattgcc atgagcgcaa cgaaactacc cgatgtgaac acccgccgcg atccggccaa
    15241 cgccgatcac gagaaagatc cctcccccta tccccttgga tttatcgcca acctgcatcg
    15301 cattggtgcg ggcgccgcgg ccgatgggca gccctggccc gagcgcaacc tgagcctcgg
    15361 gcgcagcatg cagatggctg atgcggattg cgcgctgggc ggcctgcgcg tggtggcgga
    15421 gctgatgctg gcggcggagc gcacgcggca gaacggcact gacgaagagt acgtgggcga
    15481 tcgggtgatg gaggggttga agatggcgtg tgtggcgttg actgtgatgg ctacggagcg
    15541 ggttcaaggg cgggggtagg gccgcacgca ggtgttctgc tctgcagccc gcctggctag
    15601 aatcggctct ttcaagcgca aacattgtag ccatacgtag cgcaccagtt cgcaggcccg
    15661 cctccgtcgc gcgagcgcca cccacagaaa tgtctaacga catcaccgcg gtgttcgatg
    15721 gcccgatcaa ttccctcgag atgagtggtc acgcttatac caatcagccc acagagaccg
    15781 accgagaaac gcaccgcttc tagtccccgg caaatctcta tcgcaactag aacgtgcgct
    15841 ccgggggacg agagggaggt tcgccttctt ctgacctgat ttcgacgccc ccagggtgat
    15901 cacccctcta ttatggtgaa acactgacac cgacatattc tatggaatta tatcgacata
    15961 tctctatgga attgcacttt caggatcacg ggcgaattgc tgattattct tcccagagcg
    16021 cggccagtgc ggccatcagc ggtgcagctt aaaacgccgt ggcacggcat ttcatcttac
    16081 tcgccgcatt gtgctggcgc agcagtacgg gataatgctc tatccgacca tcgggtcttg
    16141 atggccacaa gcaagttggg tttgagctaa ggcgtctcca gagactgcta ctttgcaatc
    16201 cgtcatttga aactgactgg tatgtggtca tggattcgaa tgagggattg cgatccatca
    16261 tcagtcgtaa ttcttgggat tcgatccttg ttgacctcgt gatgaaggac tgatttgctc
    16321 acgacagcgc accgatacag aagacggcgc cttaaataag tagcctccgc ccggtcccca
    16381 gccagccccc cgggcggaag cagccctttt actttagaac tgaattattc cgaggaaaga
    16441 gccctgacaa cttctcctac gcggtcaaga gactcattgg cctttaaata atcagaatag
    16501 gcggccaacg ccccttcaat gagggtgtca tagaaagcaa ttcttgcacc ccacacacgc
    16561 agcgactctt ccacataatt atgcggaagc ccagctgaag taggaacagc cttacctagc
    16621 acaaagacaa cttcaattct tggctgcgtc tcgcccgcat tgttgcagag cttcgtcatt
    16681 gcggcgaggt atttgtggcc ctgctcattg agttgatcaa gggtcatggc tcgctcgtac
    16741 ttcttcaact cgacaataat atgaacacca gcgttcgatc gatatttaat atcgattcgt
    16801 cccttcgact cctcgtcggt caggttatct gcaaagtctc ttgggaagtg agttctaagc
    16861 tgcctctcca tagtttcgct gccagatgcc ctttcccatc ctgcatcgag aagccagaga
    16921 ttcttgaaaa gatgctcctg aagaaccttc tctttagctt gagcgtcagc cagatctcgg
    16981 aacttcctaa tagcttccac acgggatttc acaatatccc cgtaaagaga tgcctcgtag
    17041 tactcctgat tcataagcaa gggaagcaga tgatctgcgc tcaacacact gagattctct
    17101 aatcgatggg ctgcttcctt aagtcgaagt cgctcaaacg cgagaacccc ggagcggaat
    17161 aactcagctc gatcctgctc tctctcgtca tccaacggca gtccttcaat gagtccgatc
    17221 agactcttcg ctggcacttg ctgttctttt ggcaagccat caacccaacc cttcaaggcg
    17281 ggacgagcca actgggcttc ttcagctttt tgatgcttgc gaacttcgga ccacttctca
    17341 gatgcgtcaa gcagcgcctt gcgcataaat gacctaaggg ccattacgcg atgatcatct
    17401 tccaccagcc gctgtcgatc actggtagcg atatcttcct cctggtcggt gtcaaggaag
    17461 tctgcttgaa tttgtcccgt tacgtaagat ccgaatattc tattgaatcc cagcttatca
    17521 agaatgctct cctgaatcag acgaccacgc gcaagaacta caatattttt aagggagcca
    17581 gactcttcgc cttctaactg agcaggcttc tttgcggtac cgaaccaacc ggtaacttgc
    17641 caggctggat tagctgcaac aatattatcc gcaatcacat actttccggc gactactgga
    17701 gtggctgcat cagcgaccgt cttggcccca aactcccaca tgtactcgag gcttcgcaga
    17761 tcgtcacgat cctgatgccc gatcttgaca ccattaacca gaacatcgaa agcgtcaccc
    17821 gtcgaactaa cgaaaccgat aaccgagaag cgcctagcta gtctttttct taaagcattg
    17881 acggtgatag acgtccgttt gacctgcaac gaagacatct caagaacggt tccctttttg
    17941 ggagtgtcat ccggaaaagg aatctccaga ggatgataga ttcctgatgc tttaatatct
    18001 cgctcaagat ccttaagccg caactcgaat gcacttgaga caccgtccct tgtactgaag
    18061 actttaacaa cttctgcgac tgagaatact gacagcttcc ctataccttt ccgccccatg
    18121 aacttccgtc catttttcgc aaccccgcct tcagtctttc tcttatcgta tccaaccgta
    18181 agaaacttat cattgatgtc atcaacattc atgccgatac catcatccgc aattactaag
    18241 cgccccttag cctcatcaaa atcaattgtt actttttcgg cctgagcgtc ccaaccattt
    18301 gcgaccagtt ccgatattac tgccgcgacg ttgctgtaca accgtattcc gagatgctcc
    18361 agcactcgga aatcaagctt cattctaaac ttgtctacca tgacaccccc tgtaagcctc
    18421 aagctaaagg cttttaatgt gaccaacaaa ttgcctgcca atagcggccc ccaatggcgg
    18481 cggcaccgca ttccctatca acctaccgag cggaagaaat tcaacagcgc cccccttctc
    18541 aatgaatatg tattctcggg gaaacccttg aagcatcgcg cattctcgaa gcgtcagggc
    18601 gcgatcctgc tctggatgtc caaagcgccc cgtaccaaaa ctaaaggctt gagttgtaat
    18661 tgtaggagcc ggctcatccc aactcattct cgcgtatacg ctctgaaacg aagatccgct
    18721 atccttcaga tgacatggcg cacgcaagga ttttggccaa tccctccatg tgccgccagg
    18781 aatcgatgcc tgaattcgag cgagattgat agggctaagt gttcttgcct tgtggagtgg
    18841 atcaacttta tccacctgcc ccgattgcac ttttggcaat ctaccaatca cgtcacggac
    18901 gctgagaaag tcctcctcct ggacagagcc ttccggtgcg gctatgggcc ccaatcgaga
    18961 tccgactagc actaaacgac gccgcctttg agctaatcca tagcgtggac cgaaacagga
    19021 ttgaaatgac acgtgatagc cgtagctttt cagcgaatcc acaaaacgta caaatacgtc
    19081 ggtagaacca atccccggaa cattctccat cgtaaccaaa tcaggtttaa cggcctcaac
    19141 taatcttcta aactcatcaa gaagcggcca tttaatatcc tgctttgtat cactaccccg
    19201 tctatagctc gagaacggtt ggcagggggc acagccggcc aggagacgaa ctccttcctt
    19261 cggaaagatc cttttaatct cggccgcggt gacctgcttg atatccttgc aatgaaaggg
    19321 cgcttttacg ttcttctcga aggcgtagcg acacgtttca tctatgtcga aaccagctag
    19381 gaccttcacg ccagcttttt tcaatccgta cgagagcccg ccaagaccac agaagaggtc
    19441 aatggcgttg atcttaggca cttttttggt catgcacggg atcatacctg accttcacag
    19501 gctcgtcgat gggtaaaagc gcagatagga gtcgttgatc acggaggatc caccatccca
    19561 agtcctccta gagcaactgc gttattgatg gcttgtgtaa gcaatctgtc gctcagtccg
    19621 gcctagcgag gactggctac aggaaaaagc gggctgccaa gtcatgcctt cacgcactac
    19681 aacgttgagg acttacagtt tcacaatgca aattctcacc actcgccccg cgcttttaac
    19741 cacgagccat cgaatggaca gccgttgaat tcagctcagc catatatcat aaattgaaat
    19801 aacactagca tgccaatata tatcagccgc cctagccaag tcggtaaaga agtcgcccct
    19861 catcctacag acttccccat caaatttggt aatagagcac aatccctaca ttccattcct
    19921 gatgtggagc atcgaattat tgatcatatc gatgaattct cagatgagca cccatatact
    19981 tgcacagaat atcctgaccg caagaattcg cagcccctcc gtcgcggaca cccgacggac
    20041 gataatacct ggccacatct tagttacgta ttacctacca tcacatcaat cgaccgtcac
    20101 ccattgccca tgaaaataat tctcagtttc tcttcccgtt aagcattccg gaaaccatgg
    20161 gcagcacttc cagctctcca gcaccccaac cgtgccggcc acggaaattt gagcgaagta
    20221 gtttacctcg cttgtcatca acaaaaaaaa gggggcgggc cagtagcccc ccccctcttc
    20281 attagcatat tatttttgct gctatttcat caaaccccaa caggattagc cttctccgga
    20341 tcaatcttgt actgcttgat cgcccgggcc acatccttcg cagtcatctt cccttccttc
    20401 gccagcgccg caatcgcggc atgcgcgatg tagtagcgat ccacctcaaa gaaccggcgc
    20461 aggttcgcac gcgtatccga acgaccaaaa ccatccgtac ccagcacggt gtacgacatc
    20521 ggcacgaacg cacggatctg gtccgcatac gcacgcacgt agtcggtggc ggcaatcgcc
    20581 gggccctggc gaccttccag cagctcggtc acgtaagcct tgcgctgctc accttccgga
    20641 tgcaggcggt tggcacgttc cacgtcgaaa ccatcgcgac gcagttcgtt gaagctcggg
    20701 cagctccaga tgtcggcggt cacgccgaag tccttgtcca gcagctcggc cgcggcaatg
    20761 gcttcgcgca ggatggtgcc cgagcccagc agctgcacgc gcagctcgcc cttcttcggc
    20821 ttgccggcgt cggtcagcag gtacatgccc ttgacgatgc cttcggccgc gccttccggc
    20881 atttccgggt gggtgtagtt ctcgttcatc agggtgacgt agtaatactc gtccacctgg
    20941 tcttccatca tgcgcttggt gccgtgctgc agaaccacgg tcacttcgaa gccgaaggtc
    21001 gggtcgtagc tgcgcacgtt cgggatgcca ccggccacca gatggctgaa gccatcttcg
    21061 tgctgcaggc cttcaccgtt cagcgtggtg cggccggcgg tgccacccag caggaagccg
    21121 cgggtacgca tgtcggcggc ctgccaggcg atgtcgccca cgcgctggaa gccgaacatc
    21181 gagtagtaga tgtagaacgg cagcatcggc acgttgctga ccgagtagct ggtaccggcc
    21241 gccatccacg agctgatcgc acccggctcg ctgatgccct gctgcagcac ctggccgctc
    21301 tggtcttcgc ggtagaacat cagctggtcg gcgtcgaccg gcttgtactt ctggccgaac
    21361 ggcgcgtaga tgccgatctg gcggaacagg ccttccatgc cgaaggtacg ggcttcgtcg
    21421 gccacgatcg gcacgatgtg cgggcccagc tccttgtcac gcagggtgat gttcaggctc
    21481 tgcacgaacg ccatggtggt ggagtagctg cgctcgccgc tgctcttcag caggcggtcg
    21541 taggcttcca gcttcggcgc cacgaaggtc ttgtcggcct tgcggcggcg ctgcggcagg
    21601 taaccgccca gcgcggcgcg gcgttcctgc aggtactgca cttccggcga atccgggccc
    21661 gggtggtaga acggcacctg gccgtcggcc agctgcgcgt cggtcaccgg aatgttgaag
    21721 cggtcgcgga agtggcgcac cgcttcgtcg tccagcttct tggtctggtg ggtcggattc
    21781 agcgcttcac cggcgctgcc catgccgtag cccttcacgg tcttggccag gatgacggtc
    21841 ggcatgccct tggtgttcac ggcctggtgg taggcggcgt acaccttgtg cgggtcgtgg
    21901 ccaccacggt tcaggcgcca gatgtcgtcg tcgctcaggc cggcaaccat cgcagcggtt
    21961 tccgggtact tgccgaagaa atgctcgcgg gtatacgcgc cgccgaaggc cttgcagttc
    22021 tggtattcgc cgtcgacggt ttccatcatc agcttcttca ggacgccgtc gctgtccttg
    22081 gccagcaggg catcccagta accgccccac agcagcttga tcacgttcca gccgccgcca
    22141 cggaacacgc cttccagttc ctggatgatc ttgccgttgc cgcgcaccgg gccgtccagg
    22201 cgctgcaggt tgcagttcac cacgaagatc aggttgtcca ggccttcacg gccggccagg
    22261 gcgatggcac ccagggtttc cggctcgtcg ctctcgccgt cgccgatgaa gcaccacacc
    22321 ttgcggtcgg acttctcgat caggccacgg ttttccaggt agcgcatgaa ctgcgcctgg
    22381 tagatggcgg ccagcgggcc caggcccatc gacacggtcg gggtctgcca gtagtccggc
    22441 atcagccacg ggtgcgggta cgaggacagg ccaccgccgt ccacttccat gcggaacttg
    22501 tccagctgct cttcgctgat gcggccttcc aggaaggaac gcgcgtagat gcccggggcg
    22561 ctgtggccct ggatgaacag caggtcgccc gggtggttct cgctgggggc gcgccagaag
    22621 tggttgaagc ccacgtcgta cagggtggcg ccggaggcga acgaggcgat gtggccgccc
    22681 aggtcacccg gcttgcggtt ggcacgcacc acggtggcca tcgcgttcca gcggatgatc
    22741 gaacggatgc gccattccag ctcggcattg cccgggctct tggcctcgag ctgcggctcg
    22801 atggtgttga cgtactcggt ggtgggagag aacggcaggt aggcgcccga acgacgggtc
    22861 agttccacca tgccttccag cagctgatgc gcgcgctcgg agccctcgac atcaataacg
    22921 gccttcaacg actcgatcca ctcctgggtt tccacaggat tcgggtcgtt gttcagcacc
    22981 tcgttcaacc agttcattag cgctcccata accgcacgca cgcgcgcgac tgttgtatag
    23041 atttctagac cgcaaagtgt agcgcaccaa gggctttcgt cacttggcta cgcaggcgta
    23101 tggatgcaac cggccagtgt ccgcaagggg cttgcaaggg cccgtgatgg ccctgcggcg
    23161 ggccttggcg gctgcgcggg ctgtcgcttg cgggccgctg cggccatgtg caggacgcag
    23221 tgttaccgct gccgatgacg gttgtagggc aactctggag ccacggtagg tgcggtgcgg
    23281 gctgcggttc tgaaccggcg acaacatgtc gcagtcgcca ctggatcggc gccgccgatg
    23341 ggcccagcgt gggtcgcgag tgatgggcct ggcgccctgc tcccttccac agtaccgccg
    23401 gggcgccctg caaggggcgc ccctttttct gtgcgcgcgg ctggccgtgg cccaaaacgg
    23461 gattgcttgt ggccggatcg atgattgccg gcttcgatat atcgatatat cgtttgcaca
    23521 ctcgtttacc gatatatcga aatgagccgt accccctctc ccagagcccg ctccaccgat
    23581 ccggcggtgc cgcgccgcaa cggccagccg cgggtgctca gccgtggtga cctgcgcctg
    23641 ctggtgctgg cgctgatcgg cgagcagccg cgccatggct acgagctgat gcagctgatc
    23701 agcaaccagt tcatgcaggc ctacacgccc agcgccggca ccatgtaccc gctgctggcc
    23761 agtttcgagc aggccggctg gatcgaggcc gaggaagtgg acggcaagcg gatcttccgc
    23821 atcaccgccg ccggcgagtt cgagctgaag gtacagcgca cccaggtgcg gctggcgcag
    23881 cggcgcgcct tcgaccgcgc ccgcgagatc accaaggcct cgctgccgcc gccgctggcc
    23941 actgccctgc gcgagttcaa gcgggcgctg gtgcatcacc acggccgctg ggccgagggc
    24001 gaggcggacg aggtggcggc gctgctgacg cgggcctcgg ccctgctgaa cggtaccgcc
    24061 ggtagcgaga catcaccgct ttcaacgacc cagccagact gactccagcc aggtcctccc
    24121 ccatgccgcg cgcccccgcg cgaccctttt acaggtatcc ccatgaccga acacaacaac
    24181 acgcgcctgc gcctggatgt gcgcttccgt gaactgaccg tgctgcgcac cgaggaagtc
    24241 accccgcaca tgcgccgcgt ggtgctgggt ggcgacgatc tggccggttt tgattcgccc
    24301 ggcgccgacg accacatcaa gctgttcttc cccaacgctg cgggcgagat ggtgcttccg
    24361 gtactgaccg ccgaaggccg cagctacccg gcaggcaagg agccctcgcc ggcccgcgac
    24421 tacaccccgc gctggtggga ccacgaaacc ggcgagctgg ccatcgactt cgtgctgcac
    24481 gaccagggca ttgccgggcc gtgggccgag caggcgcagg ccggcgacgt gctggtgatc
    24541 ggcggcccgc gcggctcgtt cgtggtggcc gacagctacg acgcctatgt gctgattggc
    24601 gatgaaaccg cgctgccggc catcgcccgc tggctggacg tgctgccgga cggcgccgag
    24661 gtgcaggcat tcatcgaagt gagcgatgag gccgaacgcc aggacctgcc gcagtacgag
    24721 aacgtgcgca tccactggct ggagcgcaac ggcttcccgg cggccagcag cacgctgctg
    24781 gaagacatgc tgaccgactt cgaagcgccg gacggcgatg tcttctactg gatcgccacc
    24841 gaatcgcgtc gcgcgcggat gatgcgcaag ttcatcgaag gccacctggg cgtgccacgc
    24901 gactggatcc gctcgaccgg ctactggaag gcccacccgg acgaaaccga cggcgattga
    24961 gcaagagagg gtgggtgcgg gcttcccttg ggtggttgc
//
LOCUS       DAOKIP010000040        24566 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.040,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000040 DAOKIP010000000
VERSION     DAOKIP010000040.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 24566)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24566)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24566
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.040"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            83..4003
                     /gene="purL"
                     /locus_tag="QEL58_001432"
                     /gene_synonym="purI"
     CDS             83..4003
                     /gene="purL"
                     /locus_tag="QEL58_001432"
                     /gene_synonym="purI"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014035928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase"
                     /protein_id="HDS1675913.1"
                     /translation="MSGPFPNYGSPDMMVLEGAPALSPFRRERLESRLQSIAPSLRIS
                     GAWHVYFVQPEGSAAPDLATLCRILEAAPQAEAVADGAVSRIVVPRLGTLSPWSSKAT
                     ELVRGAGQPVSRVERGLRIDVQGWPADAAAQQALVKALHDPMTQSVLETVAEGQALFS
                     APARGELERVPVDQLEAANQRLGLAMAQDEIDYLRERFTALGRSPSDVELMMFAQANS
                     EHCRHKIFNASWTIDGQEQDRSLFRMIKNTHQQTPQHTLSAYSDNAAVIEGHPASRYR
                     PDPASGEYRREPQVPSAFQIKVETHNHPTAIAPFPGASTGNGGEIRDEGATGRGGKPK
                     AGLSGFSVSHLRIPELPQPWEAPRALNPRMAPALEIMTDGPLGGAAFNNEFGRPNLLG
                     YFRSFELPEGADLVRAYDKPIMLAGGLGAIDRIQVEKIPLQAGDAVIVLGGPAMLIGL
                     GGGAASSVASGESAEDLDFASVQRDNPEMERRCQEVIDRCVAMGANNPIKFFHDVGAG
                     GLSNAIPELLHDSKVGGVIDLGKVPTDDPSLSPMQLWCNESQERYVLGVAQERLAEFA
                     ALCARERCPFAAVGVATAEEHLVVAYGAVPGHTPADAPIDLPMDVLFGKPPKMHRDTA
                     HPPAPRWPALKTGGLDLHEAGLRVLAHPTVASKNFLVTIGDRSVGGLTAREQMVGPWQ
                     LPVADVAITLADFDGVSGEAMSIGERTPLALLDAAASARMAVGEALTNLCAAPVDALD
                     EIKLSANWMAAAGHPGEDALLYDAVKAVGMELCPQLDISIPVGKDSLSMQAQWHDQGE
                     AHKSVSPVSLVISAFAPVADVRQQLTPLLDREVESELWLIGLGAGKQRLGGSILAQVH
                     AEHGDLPAFAGAAPDLDDPQRLRGFFELIRDARQSGLLLAYHDRSDGGAFAALCEMAF
                     TSRLGLDITLDAWGDDPFRSLFNEELGAVVQIAREDRAAFADLVERHALTECAQRIAK
                     PTTAPVVRVSLGGENLAEWRWDALFDAWWSVTHAMQKRRDNPANADAEREVARAFNAP
                     GLKPKLSFDLNEDVAAPFISTGARPRVAVLREQGVNGQIEMANIFERAGFRAFDVHMS
                     DLIEGRVALQDFTGLVACGGFSYGDVLGAGRGWATSILERSALRDAFAAFFAREDSFA
                     LGVCNGCQMMSQLKNIIPGAEHWPQFRRNASEQFEARTALLEVVESPSILLRGMAGSR
                     LQVAVAHGEGQAVFDNTVDQAAARVSLRYIDGHGNVASQYPLNPNGSPDGITGLTSSD
                     GRVTIMMPHPERTPRALNLSWAPAEWQGDSPWMRMFRNARVWCG"
     gene            4445..11626
                     /locus_tag="QEL58_001433"
     CDS             4445..11626
                     /locus_tag="QEL58_001433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014035929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell surface protein"
                     /protein_id="HDS1675914.1"
                     /translation="MNRIYRKVWNKALGQLVVASELASSDSSSGGVVDQRRDATRATP
                     ALLAVALGLVLGLGMSGTAAAQSVQIGGSATCVAFSGKLLEKCLIEGSATAKGSNAVA
                     IGSNSNASAANSVALGAGSKATRANTVSVGDAGKERQITHVAAGAQATDAVNKAQLDA
                     QARATQAAIADVAADGSRYFKADGAGDDSDAAKIDGQGALAAGAGAQSLANATTAIGT
                     QAIAAGIGASAFGQGALAIGDASVVVGQSAAAFGLGDTAVGASAYAASENGAATALGA
                     LSEATADGATAVGGGAVAMGPGSTALGRGATAANEASIAVGAFSTAVGEYSTALGSNS
                     AAVAIGSVALGAGSLADRVDTVSVGAAEYGLTRQITSVAAGTEDTDAVNVGQLKDVAA
                     VADATAKRFQANGSSNSDAGALAEGDEALAAGEAANAIGKGATAVGAGATAVAQNATA
                     VGNNALASGQNSAAFGNNAQANGPGSVAVGGAAVDADGNPLITSGGVPVETGATSAGV
                     GGTAVGASADAGGFAASAYGVGAYAAGAQSSAFGAVANAIGDYSTALGTQSNATGTSS
                     VAIGGPADLIPGLGFFVQTQASGEAATAVGAGAIASGDRAVANGSLTEASGAEATAVG
                     YFAYAPGENASALGAQTWASGAQSTAVGYYATARGANSVALGANSEAVRANSVAVGSA
                     GNERQITSVAAGSEATDAVNKAQLDAVASTADSTARFFQAQPEAGSDAGALAEGEGAV
                     AAGSSSNAIGAGAVAQGAAASAIGDDSVAVGRNSNATGKGGVAIGGLGQAYDEYNQPI
                     IGADGTAQQVGTTAVADGTAVGSGAQATGAASNAFGSAARASGDNSFAAGGKSRATGA
                     YAVAVGDSAFASSDDSTAVGGYSWATASGASAFGSGAWATATNASAFGNAAWASGSGA
                     TSIGYNSWANGASSTAVGRGAFGYGDNSVALGFQALGNSLNSIAIGTNTVAGGESAIA
                     LGAGSNASAGNAVALGAGSVANRARTVSVGSAGNERQVTNVAAGTQATDAVNKAQLDA
                     VASTASTTSRFFQASGNGDDVAGALVEGDNALAAGDAANAIGNGATALGSGANALANN
                     AQALGFNALATAANASAVGANAQATGEYATAHGAESEASGEQSAAFGAASIASGAGST
                     ANGVLSEASGEEAVAVGYFSNASGDAATAVGSESVASGTASAAFGIGAEATGGYSTAI
                     GGYAQASAFNATAFGNFANASGSNSVAVGGDSEASGAYSTATGQGSLATGTNSVAVGG
                     SLFGLLATEASGNYSTAVGGGAWSGGINSTALGNAAESRGANSVALGADSIADRDNTV
                     SVGGGGNTRQITNVADGTQGNDAVNKNQLDAVAAAAEKTSRQFQASGNADGETGALVE
                     GDNALAAGDAANAIGNGATALGSGANALAANATAVGIDALATGNNAAALGSTAQATGE
                     DSLALGSGASASELGASATGARAQASGAYSTATGTESNASGTQALASGFRSAASADGT
                     TAVGGYAEASGRLGTALGYGSAASGANTTAVGFGAAAAGTGAVAVGQSSEASGEESVA
                     IGGSTFFGLIPSRASGTGAAAFGAGAWATEDYATAIGWNSWAAGSSATALGANATANG
                     SNSVALGAGSKADRDNTVAVGKAGGERQVTHVAAGTEATDAVNKGQLDAVATVADKTS
                     RQFQASGNADGEAGALVDGDNALAAGNAANAIGNGATALGSGANAMAANATAVGFDAL
                     AAGNNAAALGNTAQASGVDSVAVGSGASASELGASASGAGAQAKGAYSTASGAQATAS
                     GTQSQASGFRANASADGASALGSYAEASGRLGTAVGYGSKATGANATAVGVSANATAA
                     GSIALGAGSVADRANTVSVGSVSTDRQITRVAAGTERTDAVNRGQLDAVAATADGTAR
                     YLKATGSGTASASGSDATAIGSAASASGARSNAVGANAMAIGNGALALGNSAGASGAN
                     SVALGAGSRALDANVVSVGGGNGTDGPATRRIVNVADGRIGAGSTDAITGSQLNVTNQ
                     RVGAVETRVGDFDSRIATVETTAASAVSYDDASRDRLTLSGFQGTTLDNVGAGSIAAG
                     SRQAINGGQLFQSLSDAASFLGGGASVGMQGVFVAPNYVIQGATYSNVGDALGALDRK
                     VSEIDRRTAGGTRAGTASLRAMSAPLEDGAQASVADARVTADAAPASTARVQGTPTAA
                     AAGAGIPVGTPASGFNAVAMGDGAVASGASSTAIGQGANASAANAVALGQGSVADRAN
                     TVSVGSEGNERQVTNVAAGTTATDAVNKGQLDRGMATANSYTDSRVQAVADSFDVFKG
                     EIDGRLRHMDRRIDRQGAMSAAMLNMATSAAGIRTQNRVGVGIGFQGGESALSLGYQR
                     AISDRATVTFGGAFSSDDSSVGVGAGFGW"
     gene            11785..13638
                     /locus_tag="QEL58_001434"
     CDS             11785..13638
                     /locus_tag="QEL58_001434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family serine peptidase"
                     /protein_id="HDS1675915.1"
                     /translation="MIKKQNLRINVLAAAVLSMTAVGAVHAAGLPTREPVRQASTAQP
                     GAERIIVKYRAGAAAASDRSAKLSAVQSALTRASLSGGTSRASTLGPQVVRRLATGAD
                     LIRVQGRLAPAELQRVLKELQADPSVQYAEADVKLRRTELRAGDVQPALVPNDPFYQQ
                     NQWHLHNAVGGINAPAAWDVSQGEGIVVAVIDTGILPQHPDLVGNLLEGYDFISDAET
                     SRRPTNDRVPGAQDYGDWVENDNECYDGSLAEDSSWHGTHVAGTVAEQTNNGVGMAGV
                     AYKAKVLPVRVLGKCGGYLSDIADAVVWASGGTVSGIPANTNPAEIINMSLGGSGACG
                     STYQDAINGAISRGTTVVVAAGNETDNASKYRPASCEGVVTVGATRITGGITYYSNYG
                     TRVDLSGPGGGGSVDGNPGGYIWQTGSNAATTPESGTPGYMGMGGTSMASPHVAAVAA
                     LVQSALIAKGKDPLTPAAMRTLLKETARPFPVAIPAATPIGTGILDAKAALAKALEEP
                     CTENCGPVATPLTNKAAVGGLNGAAASSRLYSFEAVAGKQLSVITYGGTGNVSVYLAQ
                     GREPSATDNDARSTRPGTSETVRVTAPAAGTYYIKVVGEAAYNGVSILATQ"
     gene            13775..15496
                     /gene="gspE"
                     /locus_tag="QEL58_001435"
     CDS             13775..15496
                     /gene="gspE"
                     /locus_tag="QEL58_001435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005412201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system ATPase GspE"
                     /protein_id="HDS1675916.1"
                     /translation="MNALAATVTDDAEGRILDALLARGRLKEGDLARARPLHAEAGGS
                     LLGLLVRLGLVSERDQAQASAEVLGLPLLEGKQVPEAPPQALADGLPLSLRFLKQFHV
                     CPLELNEQGVRLWLADAHDAYPQQAVQLALGVPVTPVLGMRAEIDDLVERWFGQGRSA
                     MGAIVETADGEGGAVDDIEHLRDLASEAPVIRLVNLVIQRAVELRASDIHVEPFESRL
                     KVRYRVDGVLVEGESPPANLTAAVISRIKIMARLNIAERRLPQDGRIMLRVQGKELDL
                     RVSTVPTAHGESVVMRLLDRETVVFDFHRLGFTDAFLPQFRKVLEQPHGILLVTGPTG
                     SGKTTTLYTALSQLNTADVKIITVEDPVEYQIEGINQIQAKPQIGLDFANALRSIVRQ
                     DPDIIMIGEMRDLETARIAIQSALTGHLVLSTLHTNNAAGGITRLLDMGVEDYLLTST
                     INGILAQRLVRRLEPTHAERYAASPEEIERFELRRLQPEGPIHLFRPRPSALAPTGYL
                     GRTTIMEFLVMNDALRRAVMRRDGMGEIERIAREAGMRTMYEDGLSKALSGQTTIEEV
                     LRVTEES"
     gene            15521..16741
                     /locus_tag="QEL58_001436"
     CDS             15521..16741
                     /locus_tag="QEL58_001436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014504592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HDS1675917.1"
                     /translation="MPTYRYRALNPHGEIFDGQMEAASEAELVARLQDQGHLPMETQL
                     ADGGAIGGSSWRNLLRQRPLQGAALLQFTQQLATLLGAGQPLDRALSILLGLPEDERS
                     RRAITDIRDVVRGGAPLSTALERQHGLFSRLYVNMVRAGEAGGSLHETLQRLADYLER
                     SRALQGKVINALVYPAILLVVVGGALLFLLGYVVPQFAQMYESLDVALPWFTNAVLQL
                     GLFVRDWWVLLLVVPAVLALFFERKARQPAFRLALDGWLLKRRGIGRLLGELETARLA
                     RTLGTLLRNGVPLLGALGIARNVLGNRALAADVEAAADEVKNGAGLSLALSRGKRFPR
                     LALQMIQVGEESGALDSMLLKAADTFEQDSARRIDRLLAAMVPAITLVLASVVGAVIV
                     AVLVPLYDLTNAIG"
     gene            16791..17234
                     /gene="gspG"
                     /locus_tag="QEL58_001437"
     CDS             16791..17234
                     /gene="gspG"
                     /locus_tag="QEL58_001437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004154150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system major pseudopilin GspG"
                     /protein_id="HDS1675918.1"
                     /translation="MIASRRPIRLSFTAARNQSGMSLLEIIIVIVLIGAVLTLVASRV
                     LGGADRGKANIAKAQVQTVASKIDNYQIDTGKLPGSLNDLVTAPAGIGGWLGPYAKPA
                     DLNDPWGHALEYRAPGEGQPYELVSLGKDGKAGGSSVDADIRYQP"
     gene            17241..17735
                     /locus_tag="QEL58_001438"
     CDS             17241..17735
                     /locus_tag="QEL58_001438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GspH/FimT family pseudopilin"
                     /protein_id="HDS1675919.1"
                     /translation="MTYFLPRRLPRPRLHGRRAAGLSLLEMLLVIALIAAIGLITAAG
                     LSRGFSGMQLRSAGKDIANQLRMVRAQAIARGEPQRFVIEPARRRWEGANQRVGEVPP
                     QLQVQFEGAAQLATAPGQGVIEFHPDGGSSGGRIRLQRDAAEWRIDVGWLTGEVRSGP
                     WREQ"
     gene            17732..18151
                     /locus_tag="QEL58_001439"
     CDS             17732..18151
                     /locus_tag="QEL58_001439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005415227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HDS1675920.1"
                     /translation="MKRSARGFTLLEVIIAFALLGLALTLLLGSLSGGAKQVREAKVR
                     TRAVLHAQSLLAEAGVASPLQVGSQQGDWEQGRYHWELQVQPWVEPRAGNQAQTQAPG
                     MPWLAELQLQVRWGDSEREQLRWRSLRLLPPDLENAR"
     gene            18148..18780
                     /locus_tag="QEL58_001440"
     CDS             18148..18780
                     /locus_tag="QEL58_001440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein J"
                     /protein_id="HDS1675921.1"
                     /translation="MKRGAAGFTLVEVMLATVLLAGGLALAFASVRSAMAVSQRGEQI
                     AAESERMRAVEALLRRQLSAALRTPLEAPDPTREPIFFQGEEQRMLFAADLPGYLGRG
                     GAYLHALQVEGRSGQQRLLLDLVLLQEGEHIAENPPRPPEVLVDNLKSVQLRYRGIDA
                     STGQVTDWMPRWDDTRRLPMLVEIQIVPAKGTPWPALVVAPRAGGSGGAR"
     gene            18777..19640
                     /locus_tag="QEL58_001441"
     CDS             18777..19640
                     /locus_tag="QEL58_001441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004142842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="general secretion pathway protein GspK"
                     /protein_id="HDS1675922.1"
                     /translation="MNRVRGAALVLVLWLIALMTALVGAFALSARVEHLQQQVLDGDA
                     RGQERARAGMEYALMRLSADPQRAPWRADGRTYRWQFDDANIEITVLDENGKINLNLA
                     DVALLEAFLKALGEEDGSARQLAGAIVDWRDEDSLLQPGGGAEAPDYAAAGLPYGPRN
                     RRFETLGELQRVLGMRGPLYRAMLPHLTLYSRQSRPDPQFASAPVLTALGLDADTLLA
                     QRAQQERDADSAAGASTLASSSGTYSIESRVTDGSGRRSVLQAVVRNGSGGVPGRTYT
                     VLRWEQGMTAR"
     gene            19637..20769
                     /locus_tag="QEL58_001442"
                     /pseudo
     CDS             19637..20769
                     /locus_tag="QEL58_001442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005408030.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="PilN domain-containing protein"
     gene            20744..21457
                     /locus_tag="QEL58_001443"
     CDS             20744..21457
                     /locus_tag="QEL58_001443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004142897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="general secretion pathway protein GspM"
                     /protein_id="HDS1675923.1"
                     /translation="MPMPSARRDRWLALALLLAVLGLAYLLLVHPWFTQPLREIDADV
                     AALREREARVQAQLQQQPQIEQRLRATREALQQRPGFLHEATAEAAAAALGAKLQDAV
                     AMASPGNRSCTISNRTPLTDNRRDAEFVRVAMQVRLRCGVAELATVLHSLETGSPRLF
                     VDNLNLIAQRFQQSPNESGLGLDVSFELAGYLLPGAATDAATPAPATEPAAQPQPSPA
                     AAAPAPAAPAEGQEVADET"
     gene            21447..22232
                     /locus_tag="QEL58_001444"
     CDS             21447..22232
                     /locus_tag="QEL58_001444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005415232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="general secretion pathway protein GspN"
                     /protein_id="HDS1675924.1"
                     /translation="MKLEQISLRTGFLLALAGWAAAIWLATGFGLGSQLPGADGDADA
                     APSLPALPALAAERMASADSYSAIGERPLFAEDRRPRPYLLGGSEPAASAALRLTGVL
                     LTGNFSMATFTTEQNRSVRLRLNGDAVDGWQLVALEPRRATVIGPGGSQVLELAVFNG
                     QGGEPPTVLRGANGAPPAGAIVVPPPAGAPPAPPPAAASAQPAPQPAVNVPPAAATPP
                     ANNNGPSEAQMQAIRERIQARRRQLQQQQQQQPSPPPGDGTNR"
     gene            22242..24446
                     /gene="gspD"
                     /locus_tag="QEL58_001445"
     CDS             22242..24446
                     /gene="gspD"
                     /locus_tag="QEL58_001445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005408033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system secretin GspD"
                     /protein_id="HDS1675925.1"
                     /translation="MSLRFLPWSFALALLVGCSTVSAPHVQRKGNLTSTTEAGQAAEV
                     AADAARDAQGAPQAVIRRGTGTMINREAARAPAPALHGASTGEATFNFEGESVHAVVK
                     AILGDMLGQNYVIAPGVQGTVTLATPKPVSPAQALNLLEMVLGWNNARMVYSGGRYNI
                     VAADQALAGTVAPSTAPAASARGFEVRVIPLQFISASEMKKVLEPYARPNAIVNVDSG
                     RNVITLGGTRAELENYMRTVEIFDVDWLSGMSVGVFPIQSGKAEQVAADLEKVFGEES
                     KTPSAGMFRFLPLENANAVLVITPQVRYLDQIQQWLDRIDTAGGSARLFSYELRYIKA
                     RDLAERLGEAFASSGNRGGSSPASLAPGAIPSQLGSDGDRGMDSSNGSSNFGSTSGSS
                     TGGSNNGSMNLPQRQSGNVSVSLEVEGDRVGVSAVEETNTLLVRSTPQAWRSIREVIE
                     KLDVMPLQVHIEAQVAEVALTGDLKYGVNWFFDNAVLGQKLTGALGGVTLPAAAGGSW
                     SSFAGAVTGADGLGWAFTGHNGAAVVSALDKVTDVRLLQTPSVFVRNNAEATLNVGDK
                     VPINTTTVNTGVGTSSYSSVQYIDTGVILKVRPRVTRDGTVFLDIVQEVSSASDVPET
                     CNPTERNCNPRISTKKLSTEAAVQSGDTIMLAGLITDSATDGSSGIPGLSKIPVVGAL
                     FGQKTRTSRRSEVIVLLTPTIVRNAQESRNLTDEYSQRFRAMEPLNQPRAKK"
BASE COUNT         4035 a         8349 c         8678 g         3504 t
ORIGIN      
        1 ttgctttggc cgttgctgtt gccctggcct cggcgggtgc cgggcgccgc ccggccagag
       61 cccttccccc gcttccggta caatgtcggg cccgtttccc aactacggtt ccccggacat
      121 gatggtcctc gagggcgcgc ccgccctgtc gccgttccgc cgcgaacgtc ttgaatcccg
      181 cctgcagtcc atcgctccct ccctgcgcat cagcggtgcc tggcacgtct acttcgtgca
      241 gcccgaaggc agcgccgccc ccgacctggc caccctgtgc cgcatcctcg aagctgcgcc
      301 gcaggccgag gccgtggccg atggcgcggt cagccgcatc gtggtgccgc gcctgggcac
      361 gctgtcgccg tggtcgagca aggccaccga actggtccgc ggtgcgggcc agccggtcag
      421 ccgggtcgag cgtggcctgc gtatcgacgt gcagggctgg ccggccgatg ccgccgccca
      481 gcaggcgctg gtcaaggcgc tgcacgaccc gatgacgcag tcggtgctgg agaccgtggc
      541 agagggccag gcgctgttct cagcaccggc ccgcggtgaa ctggaacgcg tgccggtgga
      601 ccagctggag gccgccaacc agcgcctcgg cctggccatg gcccaggacg agatcgacta
      661 cctgcgcgaa cgcttcaccg cgctgggtcg ctcgccgtcg gacgtcgaac tgatgatgtt
      721 cgcgcaggcc aattccgagc actgccgcca caagatcttc aacgccagct ggaccatcga
      781 cggccaggaa caggaccgct cgctgttccg gatgatcaag aacacccacc agcagacccc
      841 gcagcacacg ctcagcgcgt acagcgacaa tgcggcggtg atcgaaggcc acccggcctc
      901 gcgctaccgc ccggatccgg ccagcggcga ataccggcgc gagccgcagg tgcccagcgc
      961 gttccagatc aaggtggaaa cgcacaacca tccgaccgcg atcgcgccgt tcccgggcgc
     1021 atcgaccggt aacggtggcg agatccgcga cgaaggtgcg accggccgcg gcggcaagcc
     1081 gaaggccggc ctgtccggtt tctcggtctc gcacctgcgc attcccgagc tgccgcagcc
     1141 gtgggaagcg ccgcgcgcgc tgaacccgcg catggcacct gcactggaaa tcatgaccga
     1201 cggcccgctc ggcggcgccg cgttcaacaa cgaattcggc cgcccgaacc tgctcggcta
     1261 cttccgcagc ttcgagctgc ccgaaggtgc tgacctggtg cgcgcctacg acaagccgat
     1321 catgctggcc ggtggcctcg gtgccatcga ccgcatccag gtcgagaaga tcccgctgca
     1381 ggccggtgat gcggtcatcg tgctgggtgg cccggcgatg ctgatcggcc tgggcggcgg
     1441 cgccgccagt tcggtggcct ccggcgagag cgccgaggac ctggactttg ccagcgtgca
     1501 gcgcgacaac ccggaaatgg agcgccgctg ccaggaggtc atcgaccgct gcgtggcgat
     1561 gggcgccaac aacccgatca agttcttcca cgacgtcggc gccggtggcc tgtccaatgc
     1621 cattcccgaa ctgctgcacg actccaaggt cggcggcgtc atcgacctgg gcaaggtgcc
     1681 caccgatgat ccgtcgctgt cgccgatgca gctgtggtgc aacgagtcgc aggaacgtta
     1741 cgtgctgggt gtagcccagg agcgcctggc cgaattcgcc gcgctgtgcg cgcgcgagcg
     1801 ctgcccgttc gctgcggttg gcgtggccac cgccgaggaa cacctggtgg tggcctacgg
     1861 tgcggtgccg ggccacaccc cggccgatgc gccgatcgac ctgccgatgg acgtcctgtt
     1921 cggcaagccg ccgaagatgc accgcgacac cgcgcacccg ccggcaccgc gctggccggc
     1981 gctgaagacc ggtggcctgg acctgcacga ggccggcctg cgcgtgctgg cgcacccgac
     2041 cgtggcctcg aagaacttcc tggtcaccat cggtgaccgc agcgtcggcg gcctgaccgc
     2101 gcgcgaacag atggtcggcc cgtggcagct gccggtggcc gacgtggcga tcaccctggc
     2161 cgacttcgat ggcgtgtccg gcgaagcgat gtcgatcggt gagcgcaccc cgctggccct
     2221 gctcgatgcg gccgcttcgg cgcgcatggc ggtgggcgaa gcactgacca acctgtgcgc
     2281 ggcaccggtc gacgcactgg atgagatcaa gctgtcggcg aactggatgg ccgccgccgg
     2341 ccacccgggc gaagacgcgc tgctgtacga cgcggtcaag gcggtgggca tggagctgtg
     2401 cccgcagctg gacatcagca ttccggtggg caaggactcg ctgtcgatgc aggcgcagtg
     2461 gcacgaccag ggcgaagcac acaagagcgt gtcgccggtg tcgctggtga tctcggcgtt
     2521 cgcgccggtc gccgacgtgc gccagcagct gaccccgctg ctcgaccgcg aggtggagag
     2581 cgagctgtgg ctgatcggcc tcggtgccgg caagcagcgc ctgggcggtt cgatcctggc
     2641 ccaggtacat gccgagcacg gcgatctgcc ggcctttgcc ggtgccgccc cggacctgga
     2701 cgacccacag cgcctgcgtg gcttcttcga actgatccgc gatgcgcgcc agtccggcct
     2761 gctgctggcc taccacgacc gcagcgacgg tggtgccttc gccgcactgt gcgaaatggc
     2821 cttcacctcg cgcctgggcc tggacatcac cctcgatgcc tggggcgatg atccgttccg
     2881 cagcctgttc aatgaagaac tgggcgcagt ggtgcagatc gcgcgcgagg accgcgccgc
     2941 gttcgccgac ctggtcgagc gccacgcact gaccgaatgc gcgcagcgca ttgccaagcc
     3001 gaccaccgcg ccggtggtgc gcgtgtcgct gggcggcgag aacctggccg aatggcgctg
     3061 ggatgcgctg ttcgatgcct ggtggtcggt cacccacgcg atgcagaagc gccgcgacaa
     3121 cccggccaat gccgatgccg agcgtgaagt cgcccgcgcc ttcaacgcgc cgggcctgaa
     3181 gcccaagctc agcttcgacc tcaacgaaga tgtcgctgcg ccgttcatca gtaccggtgc
     3241 gcgtccgcgc gtggcggtgc tgcgcgaaca gggtgtcaac ggccagatcg aaatggccaa
     3301 catcttcgaa cgtgccggct tccgcgcgtt cgatgtgcat atgagcgacc tgatcgaagg
     3361 ccgcgtggcg ctgcaggact tcaccggcct ggtcgcctgc ggcggcttca gctatggcga
     3421 cgtgctcggt gccggccgtg gctgggcgac ctcgatcctg gagcgcagcg cgctgcgtga
     3481 tgcgttcgct gcgttcttcg cccgcgaaga cagcttcgcg ctgggcgtgt gcaacggctg
     3541 ccagatgatg agccagctga agaacatcat ccccggtgcc gagcactggc cgcagttccg
     3601 ccgcaatgcc agcgagcagt tcgaagcccg caccgcgctg ctggaggtgg tggagtcgcc
     3661 gtcgatcctg ttgcgcggca tggccggttc gcgcctgcag gtggcggtgg cgcacggcga
     3721 aggccaggcg gtgttcgaca acaccgtcga ccaggccgcg gcccgtgtct cgctgcgcta
     3781 catcgatggc cacggcaacg ttgccagcca gtacccgctg aacccgaacg gctcgccgga
     3841 cggcatcacc ggcctgacca gcagcgacgg ccgcgtcacc atcatgatgc cgcacccgga
     3901 gcgcaccccg cgcgcgctca acctgagctg ggcgccggcc gaatggcagg gtgattcgcc
     3961 gtggatgcgc atgttccgca acgcgcgggt gtggtgcggc tgacggcgca accgtcgcgc
     4021 acgccacaat gcgatgaggt acggaaaacc cggcaggcga ctgtcgggtt tttctttgga
     4081 tgggcagaaa tacctgccgc aaccatcagt tacatgcgtt tacagggcgc cggtggttcg
     4141 tcacccagac ctaacaaaat cgctttataa acaggtgaaa tagtgaactg cttcacggca
     4201 ataggatttg ccgtgtcaaa gtcttgacga tcttgaaagt tgccgttaac acttgaaccc
     4261 cgttacagaa tcattcattt cgcagtaacc ggttggcgca cgcgctcggt tttctgtcgc
     4321 tgcgcgccgt tcggcaatac cccgcagtaa atcacgcgaa taaacgcccc caggggacgt
     4381 tgggccggaa agcccagcgg tggcgttgct ttgcccaaaa ccagtccaat caggagccgt
     4441 accgatgaat cggatttatc gcaaggtctg gaacaaagca ttgggtcagt tggtggtggc
     4501 ttcggaactg gcctcctccg acagcagcag cggtggggtc gtcgaccagc gccgcgatgc
     4561 gacacgagcc acgcccgcat tgctggcagt ggcgctgggc ctggtattgg gattgggcat
     4621 gagcggcacc gccgcggcac agtcggtgca gatcggcggc agcgccacct gcgtcgcatt
     4681 cagcggcaag ctgctggaaa agtgcctgat cgaaggctcg gccacggcca agggcagcaa
     4741 cgccgtggcg atcggcagca acagcaacgc cagtgccgcc aacagcgtgg cgctgggggc
     4801 tggctccaag gccacgcggg ccaacaccgt gtccgtcggt gatgccggca aggaacggca
     4861 gatcacccat gtcgcggcgg gcgcccaggc gaccgacgcg gtgaacaagg cgcagctcga
     4921 tgcgcaggca cgggccacgc aggccgcgat tgccgacgtt gcagcagacg gcagccgcta
     4981 tttcaaggcc gacggcgcag gtgatgacag cgacgcggcg aagatcgacg ggcagggcgc
     5041 attggcggcc ggtgccggtg cgcagtcgct ggccaacgcc accaccgcca tcggcaccca
     5101 ggccatcgcc gccggcatcg gtgccagcgc gttcggccag ggcgcattgg ccatcggcga
     5161 tgccagcgtc gtggtcgggc agagtgctgc ggccttcggc ctgggcgaca ccgccgtggg
     5221 tgccagtgcc tatgcggcca gcgagaacgg cgcggccacc gcgctcggcg cgttgtccga
     5281 agccaccgct gacggggcca ccgctgtcgg tggcggtgcc gtggcgatgg gcccgggcag
     5341 caccgcgctg ggccgtggcg cgacggccgc caacgaagca tcgattgcag tcggcgcgtt
     5401 cagcaccgcc gtcggtgaat acagcaccgc gctgggttcc aattcggcgg cggtggccat
     5461 cggcagcgtg gcgctgggcg ccggctcgct ggccgaccgt gtcgataccg tgtccgtcgg
     5521 cgccgccgag tatggcctga cccggcagat caccagcgtg gctgccggta ccgaagacac
     5581 cgatgctgtc aacgtgggcc agctgaagga cgtggccgcc gtggccgatg ccaccgccaa
     5641 gcgcttccag gccaacggca gcagcaacag cgatgccggt gcgcttgccg agggtgacga
     5701 ggcgctggcc gcaggcgaag cggccaacgc gatcggcaag ggcgccaccg ccgtgggtgc
     5761 cggtgccacc gccgtcgcgc agaacgccac cgccgtcggc aacaatgcac tggcctcggg
     5821 ccagaacagc gcagcgttcg gcaacaacgc acaggccaat ggcccgggca gcgttgccgt
     5881 cggcggtgca gcggtcgatg ccgatggcaa tccgctgatc accagtggcg gtgtgccggt
     5941 ggaaaccggc gccaccagtg ccggtgtcgg tggtactgcc gtgggtgcca gtgccgatgc
     6001 cggtggtttc gccgcgtcgg cctatggcgt gggcgcctat gccgccggtg cgcagtcgtc
     6061 cgcgttcggc gcagtcgcca atgccatcgg tgactactcc accgcgctgg gcacgcagag
     6121 caacgccacc ggcaccagca gcgtggccat cggtggcccg gcggacctga ttcccggcct
     6181 gggcttcttc gtgcagaccc aggccagtgg cgaagccgca accgcggtcg gtgccggcgc
     6241 catcgccagc ggcgatcgtg cggtggccaa cggcagcctg accgaagcct ccggcgccga
     6301 agctaccgcg gtcggctact tcgcctacgc acccggcgag aacgccagcg cgctcggtgc
     6361 gcagacctgg gccagcggcg cgcagagcac ggcggtgggc tactacgcca ccgcgcgggg
     6421 cgccaacagt gttgcactcg gcgcgaactc cgaagcggtg cgcgccaaca gcgtggcggt
     6481 gggcagtgcc ggcaacgaac ggcagatcac cagcgttgcc gccggcagcg aagccaccga
     6541 tgcggtgaac aaggcacagc tggacgcggt ggccagcacc gccgacagca ccgcgcgctt
     6601 cttccaggcg cagccggaag cgggcagcga tgccggcgca ctggccgaag gtgaaggcgc
     6661 ggttgccgcc ggttcgtcga gcaatgcgat cggtgccggc gcggttgcac agggtgctgc
     6721 cgcctcggcg atcggtgatg acagcgtggc ggtcggccgc aacagcaacg ccaccggcaa
     6781 gggcggcgtg gcgatcggtg gcctcggcca ggcctacgac gagtacaacc agccgatcat
     6841 cggtgccgac ggcacggcgc agcaggtggg taccaccgcc gttgccgacg gtacggcggt
     6901 cggcagcggt gcacaggcca ccggagccgc cagcaacgcc ttcggaagtg ccgccagggc
     6961 cagcggtgac aacagcttcg ccgcgggcgg caagtcgcgc gcgaccggcg cctatgcggt
     7021 ggcggtgggt gacagtgcgt tcgccagcag cgacgacagc accgctgtcg gcggctacag
     7081 ttgggcaacc gccagtggcg ccagcgcctt cggctccggc gcgtgggcca ccgccaccaa
     7141 cgcctcggcc ttcggcaacg cggcctgggc cagcggcagc ggtgcaacct ccatcggtta
     7201 caacagctgg gccaacggcg ccagttccac tgcggtgggt cgcggcgcct tcggctatgg
     7261 cgacaacagc gtagcgctgg gcttccaggc gctgggcaac agcctcaaca gcatcgccat
     7321 cggcaccaac acggtggctg gcggtgaaag cgcgatcgcg ctcggcgccg gcagcaatgc
     7381 cagcgccggc aatgccgtcg cgctgggcgc cggttcagtg gccaaccgtg cacgcacggt
     7441 gtcggtcggc agcgccggca acgaacgcca ggtcaccaac gtggctgctg gcacgcaggc
     7501 caccgatgca gtgaacaagg cgcagctgga tgcggtggcg agcaccgcat ccaccaccag
     7561 ccgcttcttc caggccagcg gcaacggcga cgatgtggcc ggtgcgctgg tggaggggga
     7621 caacgcactg gcggcgggcg acgcggccaa cgccatcggc aatggcgcca ccgcgctggg
     7681 cagcggtgcc aatgcgctgg ccaacaatgc acaggcactg ggcttcaatg cactggcaac
     7741 cgcggccaac gccagcgcgg tgggtgccaa tgcacaggcc accggcgagt acgccaccgc
     7801 gcacggtgcg gaaagcgagg ccagcggcga acagagcgct gccttcggtg ccgccagcat
     7861 cgccagcggt gctggtagca cggccaacgg tgtgctgtcc gaagcgtccg gcgaagaagc
     7921 cgtggctgtg ggctacttca gcaatgccag tggcgatgcg gcgaccgccg tgggcagcga
     7981 aagcgtagcc agcggtaccg catcggcggc attcggcatc ggcgccgagg ccaccggtgg
     8041 ctatagcacc gccatcggtg gctacgcgca ggcttcggcc ttcaatgcca ccgcgttcgg
     8101 caacttcgcc aatgcctccg gttccaacag cgtggcagtg ggtggcgatt cggaagcgtc
     8161 cggtgcttac agcaccgcca ccggccaggg cagcctggcc accggcacca acagcgtcgc
     8221 cgtcggtggc tcgttgttcg gtctgctggc taccgaggcc tcgggcaact actccaccgc
     8281 ggtgggtggt ggcgcctggt cgggtggcat caacagcacc gcgttgggca acgccgccga
     8341 atcgcgcggc gccaacagcg tggcgctggg tgcggactcg attgcagacc gtgacaacac
     8401 cgtttcggtg ggcgggggcg gcaacacccg ccagatcacc aacgtagccg acggtacgca
     8461 gggcaacgac gcggtcaaca agaaccagct cgatgcggtt gccgctgctg cggaaaaaac
     8521 cagcaggcag ttccaggcca gcggcaatgc cgatggcgaa accggcgcac tggtcgaggg
     8581 cgacaacgca ctggcggccg gtgatgcggc caatgccatc ggcaacggtg ccaccgcact
     8641 cggcagcggt gccaatgcgc tggctgccaa tgccacggca gtcggtatcg atgcgctggc
     8701 caccggcaac aacgcagcgg cgctgggcag taccgcgcag gccaccggtg aagacagcct
     8761 ggccctgggc agtggcgcca gcgccagcga gctgggtgcc agcgccaccg gcgcacgtgc
     8821 ccaggccagt ggtgcctaca gcaccgcaac cggcaccgag tccaacgcca gcggcacgca
     8881 ggcactggcc agtggcttcc gcagcgccgc gtccgctgat ggcaccaccg ctgtcggcgg
     8941 ctatgccgaa gccagcggcc gcctcggtac cgcgctcggc tatggatcgg cggccagcgg
     9001 tgccaacacc acggcggtcg gcttcggcgc ggccgcggcc ggtaccggcg cggtggccgt
     9061 gggccagtcc agcgaggcca gtggcgagga gagcgtcgcc attggcggca gtaccttctt
     9121 cggcctgatc ccgtcgcgtg ccagcggtac tggcgctgcg gcattcggcg caggtgcgtg
     9181 ggccaccgaa gactacgcca ccgccatcgg ctggaattcg tgggcggcgg gcagcagcgc
     9241 caccgcactg ggtgccaacg ccaccgccaa cggcagcaac agcgtcgctc tcggtgcggg
     9301 gtccaaggcg gaccgcgaca acaccgttgc cgtcggcaag gccggtggcg aacgccaggt
     9361 gacccatgtt gccgccggca ccgaagctac cgacgcggtg aacaagggcc agctggatgc
     9421 agtggccacg gtcgccgaca agaccagccg ccagttccaa gccagtggca atgccgatgg
     9481 cgaggccggc gcgctggtcg acggtgacaa cgccctggcc gccggcaatg cagccaacgc
     9541 catcggcaac ggcgctaccg cgctgggcag cggtgccaac gcgatggccg ccaatgccac
     9601 cgcagtcggc ttcgatgcac tggctgccgg caacaacgcc gcagcgctgg gcaatactgc
     9661 acaggccagt ggtgtggaca gcgtggcggt gggcagtggc gccagcgcca gcgaactcgg
     9721 cgccagtgcc agtggtgccg gtgcccaggc caagggcgcc tacagcaccg ccagcggtgc
     9781 gcaggccacg gccagtggca cgcagtcgca ggccagcggc ttccgcgcca atgcgtcggc
     9841 cgatggcgcc tcggcactgg gcagctatgc cgaagccagc ggtcgtctcg gtacggcggt
     9901 cggctacggc agcaaggcca ctggtgcgaa cgccactgcg gtgggtgtca gtgccaacgc
     9961 cacggcggcc ggcagcatcg cactgggtgc cggctcggtg gccgatcgtg ccaacaccgt
    10021 gtcggtcggc agtgttagca ccgaccgcca gatcacccgg gtcgctgcgg gtaccgagcg
    10081 taccgatgcg gtcaaccgcg gccagctcga tgcagtggcg gcgaccgccg acggcaccgc
    10141 gcgctacctc aaggccaccg gcagtggtac cgccagtgcc agcggcagcg atgccacggc
    10201 catcggttcg gcggccagtg ccagcggcgc acgcagcaac gccgtgggcg ccaacgcgat
    10261 ggcgatcggc aatggcgcgc tggcactggg taacagcgcc ggtgcatccg gtgccaactc
    10321 ggtggcgctg ggcgcagggt cacgtgcact tgatgccaac gtggtctcgg tcggcggtgg
    10381 caatggcacc gatggcccgg cgacgcgccg catcgtcaac gtggctgatg gccgcatcgg
    10441 tgcaggcagc accgacgcga tcaccggctc gcagctcaac gtcaccaacc agcgtgtcgg
    10501 tgcggtggag acccgcgtgg gcgatttcga ttcgcgcatc gccacggtcg aaaccaccgc
    10561 agccagcgcg gtcagctacg acgatgccag ccgtgaccgc ctgaccctgt ccggcttcca
    10621 gggcaccacg ctcgacaacg tcggcgcggg cagcatcgct gccggcagcc gccaggccat
    10681 caacggtggg cagctgttcc agtcgctcag cgacgccgcc agcttcctcg gtggcggtgc
    10741 cagcgtcggc atgcagggcg tgttcgtggc gccgaactac gtgatccagg gcgccaccta
    10801 cagcaatgtc ggcgatgcac tgggcgcgct ggatcgcaag gtcagcgaaa tcgaccgtcg
    10861 caccgccggt ggcacacgcg ccgggaccgc cagcctgcgc gcgatgagtg cgccgctgga
    10921 ggacggtgcg caggccagcg tcgccgacgc acgggtgacg gcggacgcag caccggccag
    10981 caccgcgcgt gtgcagggca cgccgaccgc ggctgcggcg ggtgccggca ttccggtggg
    11041 taccccggcg agcggcttca atgcggttgc catgggagac ggcgccgttg ccagtggtgc
    11101 ctcgtccacc gccatcggcc agggggccaa tgccagcgca gcgaacgcgg tggcgctggg
    11161 ccagggctcg gtcgccgacc gcgccaacac ggtgtcggtg ggcagcgaag gcaacgagcg
    11221 ccaggtgacc aacgtggcgg ccggtaccac ggccaccgac gcggtcaaca agggccagct
    11281 cgaccgtggc atggccaccg ccaacagcta caccgacagc cgcgtccagg ccgtcgccga
    11341 cagcttcgat gtgttcaagg gcgagatcga tgggcgcctg cgtcacatgg accgccgcat
    11401 cgaccgtcag ggcgcgatga gcgccgcgat gctcaacatg gccaccagtg ccgccggtat
    11461 ccgcacccag aaccgggtcg gtgtcggcat cggcttccag gggggcgaat cggcattgtc
    11521 gctgggttac cagcgtgcga tcagcgatcg cgccacggtc accttcggcg gtgctttcag
    11581 cagcgatgac agctcggtcg gcgtcggtgc cggcttcggc tggtaagccc gtccattgcg
    11641 ccggcggcca cccacgccgg cgcagcacct gcagtgaggg cctgggggga ggtcacggca
    11701 atcccggctg ggccggccgg gagtcgtcaa ggaatgatgg ccgcagtgtt ggttcgatcc
    11761 atgacccaga agaggaattt cgacgtgatc aagaagcaga accttcgcat caatgtgctt
    11821 gccgccgccg tgctgtcgat gacggccgtc ggtgccgtcc acgccgccgg gttgccgacc
    11881 cgtgagccgg tgcgccaggc cagcaccgcc caaccggggg ccgagcgcat catcgtcaag
    11941 taccgggccg gggctgccgc cgccagcgac cgctcggcca agctgtccgc cgtgcagtcg
    12001 gcgctgaccc gtgccagctt gtccggcggc acctcccgcg ccagcacgct cggcccgcag
    12061 gtagtgcgca ggctcgccac cggcgcggac ctgatccgcg tacagggccg cctggccccg
    12121 gccgaactgc agcgcgtgct gaaggaactg caggccgacc cgtcggtgca gtacgccgaa
    12181 gcggacgtga agctgcgccg taccgagctg cgtgccggcg acgtgcagcc ggcactggtg
    12241 cccaacgatc ccttctacca gcagaaccag tggcacctgc acaacgcggt cggcggcatc
    12301 aacgcaccgg cggcgtggga cgtttcgcag ggcgagggca tcgtggtggc ggtgatcgac
    12361 accggcatcc tgccgcagca tccggacctg gtcggcaacc tgctggaagg ctacgacttc
    12421 atcagcgacg cggagacctc gcgccgcccg accaatgatc gcgtacccgg tgcgcaggac
    12481 tatggcgact gggtcgaaaa cgataacgag tgttacgacg gctcgctggc cgaggacagt
    12541 tcctggcacg gcacgcacgt cgccggcacc gtggccgagc agaccaacaa cggcgtcggc
    12601 atggccggtg tcgcctacaa ggccaaggtg ctgccggtgc gcgtgctggg caagtgtggc
    12661 ggttacctgt ccgacatcgc cgacgccgtg gtgtgggcat ccggcggcac cgtatcgggc
    12721 atcccggcca acaccaaccc ggccgagatc atcaacatga gcctgggcgg cagcggcgcc
    12781 tgcggcagca cctatcagga cgcgatcaac ggcgccatct cgcgcggtac cacggtggtg
    12841 gtggccgccg gcaacgagac cgacaacgca tccaagtacc ggccggccag ctgcgaaggc
    12901 gtggtgaccg tgggcgcgac ccgcatcacc ggcggcatca cctattactc gaactacggc
    12961 acccgcgtgg acctgtccgg tccgggtggc ggcggcagtg tcgacggcaa cccggggggc
    13021 tacatctggc agaccggttc caatgcagcg accacgccgg agtcgggcac gccgggctac
    13081 atggggatgg gcggtacctc gatggcctcg ccgcatgtgg cagccgttgc cgcactggtg
    13141 cagagcgcgc tgatcgccaa gggcaaggat ccgctgaccc cggccgcgat gcgcaccctg
    13201 ctgaaggaaa ccgcgcgtcc gttcccggtc gccattccgg cagcgacccc gatcggtacc
    13261 ggcatccttg acgccaaggc tgcgctggcc aaggcactgg aagaaccgtg caccgaaaac
    13321 tgcgggccag tggcgacgcc tttgaccaac aaggcggcgg tgggtggcct gaacggcgct
    13381 gccgccagca gcaggctgta cagcttcgag gccgtggccg gcaagcagct cagcgtgatc
    13441 acctacggcg gtaccggcaa cgtctcggtc tacctggcgc agggccgcga gccgagtgcc
    13501 accgacaacg atgcgcgttc gacccgcccg ggcacctcgg aaacggtgcg ggtgacggca
    13561 ccggccgccg gcacctatta catcaaggtg gtaggcgagg cggcctacaa cggcgtgagc
    13621 atccttgcca cgcagtaaac acctgccgac gtagttgaat ggccgaggcc cgtcaccctg
    13681 tgtgacgggc ttcgtctttt tacgaaaggt ggccgagggg cggcggaaat cacggcttaa
    13741 ctgctaaagt cggagcgatt gacaggagag tcacgtgaac gcgctcgccg caaccgttac
    13801 cgacgacgcc gaaggccgca tcctggatgc gctgctggcg cgtggccggc tcaaggaagg
    13861 agacctggcg cgcgcgcggc cgctgcatgc cgaagccggc ggcagcctgc tcggcctgct
    13921 ggtgcggttg gggctggttt ccgagcgcga ccaggcgcag gccagcgccg aggtgctggg
    13981 cctgccgctg ctggagggca agcaggtacc cgaagccccg ccgcaggcgc tggccgacgg
    14041 cctgccgctg tcgctgcgtt tcctgaagca gttccacgta tgcccgctgg aattgaatga
    14101 acagggcgtc cggctgtggc tggccgacgc ccacgacgcc tacccgcagc aggccgtgca
    14161 gctggcgctg ggggttccgg tgacgccggt gctgggcatg cgcgcggaga tcgacgatct
    14221 ggtcgaacgc tggttcggcc agggccgcag tgcgatgggc gcgatcgtgg aaaccgccga
    14281 cggcgagggc ggcgcggtcg acgacatcga gcacctgcgc gatcttgcct cggaagcgcc
    14341 ggtgatccgc ctggtcaacc tggtgatcca gcgtgcggtg gaactgcgtg cttcggacat
    14401 ccacgtcgaa cccttcgaaa gccggctcaa ggtgcgttac cgcgtcgatg gcgtactggt
    14461 ggagggcgaa agcccgccgg ccaacctgac cgcagcggtg atcagccgca tcaagatcat
    14521 ggcccggctc aacatcgccg aacgccgcct gccgcaggac ggccgcatca tgttgcgcgt
    14581 gcagggcaag gaactggacc tgcgcgtaag caccgtaccg accgcgcatg gcgagagcgt
    14641 ggtgatgcgc ctgctcgacc gtgaaacggt ggtattcgat ttccatcggc tcggctttac
    14701 cgatgccttc ctgccgcagt tccgcaaggt gctggaacaa ccgcacggca tcctgctggt
    14761 caccggcccg accggttcag gcaagaccac cacgctgtac accgcgctca gccagctcaa
    14821 caccgccgac gtcaagatca tcaccgtcga agatccggtg gagtaccaga tcgagggcat
    14881 caaccagatc caggccaagc cgcagatcgg cctggatttc gccaacgccc tgcgcagcat
    14941 cgtgcgccag gacccggaca tcatcatgat cggcgaaatg cgcgatctgg aaaccgcgcg
    15001 catcgccatc cagtcggcgc tgaccggcca cctggtgctg tccaccctgc acaccaacaa
    15061 tgcggccggc ggcatcaccc gcctgctcga catgggcgtg gaagactacc tgctcacctc
    15121 caccatcaac ggcattctcg cccagcgcct ggtgcgccgg ctggagccga cccacgccga
    15181 gcgctacgca gcctcgccgg aagagatcga acgcttcgag ctgcgccgcc tgcagcccga
    15241 aggcccgatc cacctgttcc gccccaggcc ctcggcgctg gcgccgaccg gttacctcgg
    15301 ccgcaccacc atcatggaat tcctggtgat gaacgatgcg ctgcggcgtg cggtgatgcg
    15361 ccgtgacggc atgggcgaga tcgagcgcat cgcgcgcgaa gccggcatgc gcaccatgta
    15421 cgaagatggc ctgtccaagg cgctgagcgg gcagaccacc atcgaggaag tgctgcgcgt
    15481 gaccgaggaa agctgatgcg cgcaggacgc cggggctgac atgccgacct atcgctacag
    15541 ggcactcaat ccgcacggcg agatcttcga cgggcagatg gaagcggcca gcgaggccga
    15601 actggtcgcg cgcctgcagg accagggcca cctgccgatg gaaacgcagt tggccgatgg
    15661 tggcgcgatc ggtggcagca gctggcgcaa cctgctgcgc cagcgcccgc tgcagggcgc
    15721 cgcgctgctg cagttcaccc agcagctggc gaccctgctc ggtgccggcc agccgctgga
    15781 ccgcgcgctg tcgatcctgc tggggttgcc cgaggatgaa cgttcgcgtc gcgccatcac
    15841 cgacatccgc gacgtggtgc gcggcggtgc gccgctgtcc accgcgctgg aacgccagca
    15901 cggcctgttt tcgcgcctgt acgtgaacat ggtgcgtgcc ggcgaagccg gcggcagcct
    15961 gcatgaaacc ctgcaacgcc tggccgatta cctggaacgc agccgcgcgc tgcagggcaa
    16021 ggtgatcaat gcgctggtct atccggcgat cctgctggtg gtggtgggcg gcgcgctgct
    16081 gttcctgctc ggttacgtgg tgccgcagtt cgcgcagatg tacgaaagcc tggacgtggc
    16141 gctgccgtgg ttcaccaacg cggtgctgca actgggcttg ttcgtgcgcg actggtgggt
    16201 gctgctgctg gtggtgccgg ccgtgctcgc gctgttcttc gaacgcaagg cacggcaacc
    16261 ggccttccgc ttggccttgg atggctggct gctgaagcgg cgcggcatcg gccgcctgct
    16321 gggtgaactg gaaaccgcac ggcttgcgcg cacgctgggc acgctgctgc gcaatggcgt
    16381 gccgctgctg ggtgcgctgg gcatcgcccg caacgtgctg ggcaaccgcg cgctggccgc
    16441 cgatgtcgaa gcggcggccg atgaagtgaa gaatggtgcc ggcctgtcgc tggcgctgtc
    16501 acgcggcaag cgcttcccgc gcctggccct gcagatgatc caggtcggcg aggaatccgg
    16561 tgcgctcgat agcatgctgc tgaaggccgc cgatacgttt gaacaggaca gcgcccggcg
    16621 catcgaccgg ctgctggcgg cgatggtgcc ggcgatcacc ctggtgctgg cctcggtggt
    16681 cggtgcggtg atcgtggcgg tgctggtgcc gctgtatgac ctgaccaatg ccatcggttg
    16741 acgatggatc cctacgcaac cccgacactc cgcaaccgaa aggaccgacc atgattgctt
    16801 cccgtcgacc gatccgcctt tccttcactg ccgcgcgcaa ccagtcgggc atgagcctgc
    16861 tggaaatcat catcgtcatc gtgctgatcg gcgcggtgct gaccctggtc gccagccgcg
    16921 tgctcggcgg cgccgatcgc ggcaaggcca acatcgccaa ggcccaggtg cagaccgtcg
    16981 cgtccaagat cgacaattac cagatcgaca ccggcaagct gccgggatcg ctcaacgacc
    17041 tggtgaccgc accggccggc atcggcggct ggctggggcc gtatgccaag ccggccgacc
    17101 tgaacgaccc gtggggccat gcgctggaat accgcgcgcc gggcgaaggc cagccctacg
    17161 aactggtcag cctgggcaag gacggcaagg ccggcggcag cagcgtcgac gccgacatcc
    17221 gctaccagcc ctgatcctgc atgacgtatt tcctgccgcg ccggctgcca cgcccgcgcc
    17281 tgcacggcag gcgcgcggcg ggactgtcgc tgctggaaat gctgctggtg atcgcgctga
    17341 tcgcggccat cgggctgatc accgccgccg ggctgtcgcg gggtttttca ggcatgcagc
    17401 tgcgcagcgc cggcaaggac atcgccaacc agctgcgcat ggtgcgcgcg caggcgatcg
    17461 cccgcggcga gccgcagcgc ttcgtcatcg aaccggcgcg acgtcgctgg gaaggcgcca
    17521 accagcgtgt gggtgaagtg ccgccacagc tgcaggtgca gttcgaaggc gccgcgcagc
    17581 tggccacggc gccggggcag ggcgtgatcg agttccatcc ggatggtggt tccagcggcg
    17641 gccgcatccg cctgcagcgc gacgccgccg aatggcgcat cgatgtcggc tggttgaccg
    17701 gcgaagtccg ttccggcccc tggcgcgaac aatgaagcgc agcgcacgtg gcttcacctt
    17761 gctggaagtg atcatcgcct tcgccctgct cgggttggcg ctgaccctgc tgctgggaag
    17821 tctctccggt ggtgcgaagc aggtacgcga ggccaaggtg cgtacgcgtg cggtgctgca
    17881 tgcgcagtcg ctgctggccg aagccggcgt ggcctcgccg ttgcaggtcg gcagccagca
    17941 gggtgactgg gagcaggggc gctaccactg ggaactgcag gtgcagccgt gggtggagcc
    18001 gcgagccggc aaccaggcgc aaacgcaggc accgggaatg ccgtggctgg ccgaactgca
    18061 gctgcaggtg cgctggggcg acagcgaacg cgagcagctt cgttggcgca gcctgcgcct
    18121 gttgccgccg gacctggaga acgcgcgatg aagcgcggcg ccgcaggctt caccctggtg
    18181 gaagtgatgc tggcgacggt gctgctggcc gggggcctgg cgctggcgtt cgccagcgtg
    18241 cgctcggcga tggcggtcag ccagcgcggc gagcagatcg ccgccgagag cgagcgcatg
    18301 cgtgcggtgg aagcgctgtt gcggcggcag ctgtccgcgg cgctgcgtac gccgctggaa
    18361 gcgccggacc ctacccgcga gccgatcttc ttccagggcg aagagcagcg catgctgttc
    18421 gcggccgatc tgccgggcta cctcggccgc ggcggtgcct acctgcacgc gctgcaggtg
    18481 gaaggccgca gcggccagca gcgcctgctg ctggacctgg tgctgctgca ggaaggcgag
    18541 cacatcgccg aaaacccgcc gcgtccgccg gaggtgctgg tggacaacct gaagtcggtg
    18601 cagctgcgct accgcggcat cgatgccagc accggccagg tgaccgactg gatgccacgc
    18661 tgggacgaca cgcggcgcct gccgatgctg gtggagatcc agatcgtgcc ggccaagggc
    18721 acgccctggc cggcgctggt ggtggcgccg cgcgccggtg gcagcggagg tgcgcgatga
    18781 accgggtgcg gggcgcggcg ctggtgctgg tgctgtggct gatcgcgctg atgacggcgc
    18841 tggtgggtgc gttcgcactg agcgcgcgcg tcgagcatct gcagcagcag gtgctcgatg
    18901 gcgacgcgcg gggccaggaa cgcgcgcgcg cgggcatgga atatgcgctg atgcgcctgt
    18961 ccgccgaccc gcagcgggca ccctggcgcg ccgacggccg cacgtaccgc tggcagttcg
    19021 atgacgccaa catcgagatc acggtgctcg acgagaacgg caagatcaat ctgaacctgg
    19081 ccgacgtggc actgctggag gcgttcctga aggcgctggg cgaggaagac ggcagtgccc
    19141 ggcagctggc cggggccatc gtcgactggc gtgacgaaga cagcctgctg cagcccggcg
    19201 gcggcgccga ggcgcccgac tacgccgcgg cggggctgcc ttacggcccg cgcaacagac
    19261 gtttcgagac cctgggcgag ctgcagcggg tgctgggcat gcgcggtccg ctgtaccggg
    19321 ccatgcttcc gcacctgacc ctgtacagcc gccagtcgcg gccggatccg cagtttgcca
    19381 gcgcgccggt gctgaccgca ttgggcctgg atgcggacac cctgctggcc cagcgcgccc
    19441 agcaggagcg tgacgccgat tccgctgcgg gtgcgtcaac gcttgccagc agcagtggca
    19501 cctatagtat cgagtcccgt gtcaccgacg gcagtggacg ccgctcagtg ctgcaggcag
    19561 tggtacgcaa cggctcgggc ggggttcccg ggcggaccta cacagtgctt cgctgggagc
    19621 agggaatgac agcaagatga cggcgtggca ggacagtctg cgacaggtgc agggccggat
    19681 cggtcctggc gccggccgtt tcctgcgctg gtggcggcag tcgttgctgg catgggtacc
    19741 ggttcgttgg cagtgggcgc tgggttgggc gcaggcacgc ctgctgctgc agcgtgaggg
    19801 cgaccagctg caggtctggc gcgaggccgg tgagcgccga gagtccgtgg cgcggctgcc
    19861 gtggccactg tcgccggccg agctggaccg ggtcctggaa gcacgcctgc gcagcctgcc
    19921 gcgcgtgtgg ctgctgcctg ccagcgatgt gctgcgtcgc catctgcggt tgccgaccgc
    19981 ctgcgtgcgg tggtcggctt cgagatcgac cgccagacgc cgttcgaatc cagccaggtc
    20041 agctatgacg tgcgcgagct cggagcggca ggcgagggcc agctgcaggt cgaactggtg
    20101 gcctggccgc tgcgccagct ggacgcctgg cgcggcagcg tgggcccctg ggccgatgcg
    20161 ttggccggtg tagatgccat cgacgcgcag ggcaacacgc tgcaggtgaa cctgctgccg
    20221 cccgcgcagc gccagctgca ggccgatccg atgcggcgct ggaacctgct gctgggtgtg
    20281 gctgccgtgg tgatgctggt gcttgccggc ctgcaactgc tggacaaccg acgcgcagcg
    20341 gccgacgaac tgcgtgccca ggtggaacgc agcgcgcgca gtgcgcgcag cgtagccagt
    20401 gagcgcgcgc agctgcaggc gctgatcgac ggtgccgcgt tcctggaaaa gcagcgcagc
    20461 cagcgtgctg gcacggtcga catctggacc gagttgaccc ggcgcctgcc ggagggcacc
    20521 tatctggaaa agctcgccat cgagaacaac aacctgcagc tgatcgggct cagccgcgaa
    20581 gcctcgcagc tggtgcagct gctgcaggac gcaccgcagt ggcgcaaggt caatctgacc
    20641 ggtgtattgc aggccgacgg cgctgccagt ggccgtgatc gtttcaccat gaccgcggaa
    20701 ctgcagccgt tgccggcggc tgccccgacc cgggaggcgg ccgatgccga tgccaagcgc
    20761 acgccgtgac cgctggctgg cactggcact gctgctggca gtgctgggcc tggcctacct
    20821 gttgctggtg cacccgtggt tcacccagcc cctgcgcgag atcgatgctg atgtcgcggc
    20881 actgcgcgag cgcgaggcgc gcgtgcaggc gcagctgcag cagcagccgc agatcgaaca
    20941 gcgcctgcgc gccacccgcg aagcgttgca gcagcgcccc ggtttcctgc atgaagccac
    21001 cgccgaagcc gccgctgccg cgctgggcgc gaagctgcag gatgcggtgg cgatggccag
    21061 cccgggcaac cgcagctgca ccatcagcaa ccgtacgccg ctgaccgaca accggcgcga
    21121 tgccgagttc gtgcgcgtcg ccatgcaggt gcgcctgcgc tgtggcgtcg ccgaactggc
    21181 cacggtgctg cacagcctgg agaccggcag cccgcgcctg ttcgtcgaca acctcaacct
    21241 gatcgcgcag cgcttccagc agtcaccgaa tgaatccggc ctgggcctgg atgtgtcatt
    21301 cgaactggcg ggctatctgt tgccgggtgc ggcgaccgat gcggccacgc cggccccggc
    21361 gaccgaaccg gccgcgcagc cgcagccgtc cccggcggcc gcggcgcccg ccccggcggc
    21421 gccggccgag gggcaggagg tggccgatga aacttgagca gatcagcctg cgcaccggct
    21481 tcctgctggc gttggcgggt tgggcggcgg cgatctggct ggccaccggc ttcggccttg
    21541 gcagccagtt gccgggcgcc gacggcgatg cggatgcagc gccgtcgttg ccggcgctgc
    21601 cagccttggc cgccgagcgc atggccagcg cagacagcta cagcgcgatc ggcgaacgcc
    21661 cgctgttcgc cgaagaccgc aggccgcggc cctacctgct cggtggcagc gagccagccg
    21721 ccagcgcggc cctgcgcctg accggcgtgc tgttgaccgg caatttcagc atggccacct
    21781 tcaccaccga acagaaccgc tcggtgcggc tgcgcctcaa cggtgacgcg gtggatggtt
    21841 ggcagctggt ggcgctggaa ccgcgccggg ccacggtgat cggccccggt ggcagccagg
    21901 tgctggaact ggccgtgttc aacggccagg gcggtgaacc acccaccgta ctgcgtggcg
    21961 ccaacggtgc gccgccggcc ggtgcgatcg ttgtgccgcc gccggccggt gccccgcccg
    22021 cgccgccccc ggctgcggca agtgcgcagc cagcgccaca gccggccgtc aacgtgccgc
    22081 cagcggctgc tacaccgcct gccaacaaca acggccccag cgaagcgcag atgcaggcca
    22141 tccgcgaacg catccaggcc cgtcgccgcc agctgcagca acaacagcag caacaaccgt
    22201 cgccgccccc aggcgatggc accaaccgat agagtgaatg catgagcctg cgttttcttc
    22261 cctggtcctt tgccctcgcg ctgctggtcg gctgcagcac cgtgtccgcg ccgcacgtgc
    22321 agcgcaaggg caacctgaca tccaccaccg aggccggaca ggccgcggag gtcgccgccg
    22381 atgccgcccg tgatgcccag ggggccccgc aggcggtgat ccgtcgcggc accggcacca
    22441 tgatcaaccg cgaagcggca cgcgcaccgg caccggcact gcacggggcc agtaccggcg
    22501 aggcgacctt caacttcgaa ggcgagtcgg tgcatgcggt ggtcaaggcc atcctgggtg
    22561 acatgctggg ccagaactac gtgatcgcac cgggggtgca gggcacggtc acgctggcca
    22621 cgcccaagcc ggtgtcgccg gcacaggcat tgaacctgct ggaaatggtg ctgggctgga
    22681 acaacgcgcg catggtgtac agcggcggcc gctacaacat cgtcgccgcc gaccaggccc
    22741 tggccggaac cgttgcgccc agcaccgcgc cggcggccag cgcgcgcggc ttcgaagtgc
    22801 gggtgatccc gctgcagttc atctccgcca gcgagatgaa gaaggtgctg gagccgtatg
    22861 cgcggcccaa cgccatcgtc aacgtcgaca gcggccgcaa cgtgatcacg ctcggcggta
    22921 cccgcgccga gctggagaac tatatgcgca cggtcgagat cttcgacgtc gactggctgt
    22981 cgggcatgtc ggtgggcgtg ttcccgatcc agtcgggcaa ggccgagcag gtcgccgccg
    23041 acctggagaa ggtgttcggc gaggagagca agacccccag cgcgggcatg ttccgcttcc
    23101 tgccgctgga gaatgccaat gccgtgctgg tgatcacccc gcaggtgcgc tacctggacc
    23161 agatccagca gtggctggac cgcatcgaca ccgccggtgg cagcgcccgc ctgttctcct
    23221 atgaactgcg ctacatcaag gcgcgcgacc tggccgaacg tctcggtgaa gccttcgcca
    23281 gcagcggcaa ccgcggcggc tccagcccgg catcgttggc acccggcgcg attccgtccc
    23341 agctgggcag cgacggcgac cgtggcatgg acagcagcaa cggcagcagc aacttcggct
    23401 cgacctccgg cagcagcacc gggggcagca acaacggcag catgaacctg ccgcagcgcc
    23461 agtccggcaa tgtcagcgtc agcctggaag tggaaggcga ccgcgtgggc gtgtcggcgg
    23521 tggaggaaac caacaccctg ctggtgcgct cgaccccgca ggcctggcgc tcgatccgcg
    23581 aagtgatcga gaagctggac gtgatgccgc tgcaggtgca catcgaagcg caggtggccg
    23641 aggtcgcgct gaccggcgac ctgaagtacg gcgtcaactg gttcttcgac aatgcggtgc
    23701 tcgggcagaa gctgaccggt gcattgggcg gcgtgaccct gccggccgcc gcaggcggtt
    23761 cctggagcag tttcgcgggc gcggtgaccg gcgccgatgg tctcggctgg gcattcaccg
    23821 gccacaacgg cgcggcggtg gtgagcgcgc tggacaaggt caccgatgtg cgcctgctgc
    23881 agacgccttc ggtgttcgtg cgcaacaacg ccgaggccac gctcaatgtc ggcgacaagg
    23941 tgccgatcaa caccaccacg gtgaacaccg gcgtgggcac cagcagctac agctcggtgc
    24001 agtacatcga taccggcgtg atcctcaagg tgcgcccgcg cgtgacccgt gatggcacgg
    24061 tgttcctgga catcgtgcag gaagtgagca gcgcgtcgga tgtgccggag acctgcaacc
    24121 cgaccgagcg caactgcaac ccgcgcatct cgaccaagaa gctgtccacc gaagcggcgg
    24181 tacagagcgg cgacaccatc atgctggccg gcctgatcac cgattcggcc accgatggca
    24241 gcagcggcat cccgggcctg agcaagatcc cggtggtcgg tgcgttgttc gggcagaaga
    24301 cccgcaccag ccgtcgttcg gaggtgatcg tgctgctgac cccgaccatc gtccgcaacg
    24361 cccaggaatc gcgcaacctg accgacgagt acagccagcg cttccgggcg atggagccgc
    24421 tgaaccagcc gcgcgcgaag aagtaagggg tttgcggccg ggcggcgccc ggcacccgca
    24481 gaggccagag ccggagcaac agcaacagca acagcaacag caacagcggg gctactgagg
    24541 gatggcgggg cggtgtcgga ttgcgg
//
LOCUS       DAOKIP010000041        24365 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.041,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000041 DAOKIP010000000
VERSION     DAOKIP010000041.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 24365)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24365)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24365
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.041"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(249..1067)
                     /locus_tag="QEL58_001446"
     CDS             complement(249..1067)
                     /locus_tag="QEL58_001446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012512171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675926.1"
                     /translation="MRSVPTLLALSLLAAGASFANAAHAAEGDDRFAIRLGAMNIDSD
                     NTLRGRTNVAGQDIALDQDFKLGGKEWEPRIDGMFRISNRQRLLFNYFKYDKDRRETL
                     DQGISFGGENVPAGSFVKGELKYQVASLVYDYSVVDTDTFDLGLQIGGEYAKVSTKGY
                     ADLGTVYEGQFLDEKADGIAPVVGARMTFTPSERWMITLQGQYLNTRWGSFDDYKGDL
                     SRANAIVDYRFTKNFGVFAGYDWFKLDVDKKGSDGTVGLKQEFKGPVAGVSFVF"
     gene            1528..1893
                     /locus_tag="QEL58_001447"
     CDS             1528..1893
                     /locus_tag="QEL58_001447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017155241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675927.1"
                     /translation="MLNSVDAGRRLMLRAAVYPLAAVAVLALAFLLVGPKYALGALAS
                     GVAISAGGWVAARMALSGGAVAAGSAMARLIIAIVAKWVVVFGVLLVGFLVFKLPALA
                     LLAGIAVGLMFQVLAMARR"
     gene            1925..2725
                     /gene="atpB"
                     /locus_tag="QEL58_001448"
     CDS             1925..2725
                     /gene="atpB"
                     /locus_tag="QEL58_001448"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002814108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit A"
                     /protein_id="HDS1675928.1"
                     /translation="MAGEALTPTSYIQHHLHNLTAPVGKGEGMFWHIHVDTFLTAVLM
                     GLVIVVAFWLGTRKATAGVPGKWQAFVEICLEFVDRQAKDTYHGKSKLVTPIAITIFF
                     WILMMNLIKMIPADFIAKPLEWAGIHYWKPVPTADVNATLGMAISVFFLMLFFALKSK
                     GLLGFIKEFLTAPFGKWMMPFNLILNIVEWLSKPISLAMRLFGNMFGGEIVFLLIWVL
                     GGAGFFGAIAGGAFGLGWMLFHLLVIPLQAFIFMMLSIVYLSLSEDAH"
     gene            2799..3104
                     /gene="atpE"
                     /locus_tag="QEL58_001449"
     CDS             2799..3104
                     /gene="atpE"
                     /locus_tag="QEL58_001449"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010372004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit C"
                     /protein_id="HDS1675929.1"
                     /translation="MYFAVLTNFAQIQSSTALAVGIMIGLAALGAGLGLAIMAGKFLE
                     SAARQPELIPVLQVRMFITAGLIDAAFIISVAVGLLLAFANPLSAAFAGAVTKALAG"
     gene            3211..3681
                     /locus_tag="QEL58_001450"
     CDS             3211..3681
                     /locus_tag="QEL58_001450"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016901014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit B"
                     /protein_id="HDS1675930.1"
                     /translation="MNINFTLLAQALAFAGLIWIIATKIWPPLMNAIEERQQKIAEGL
                     AAADRSQKDLAQAQEKVNEALKEARTKANEIIDQAHARANQIVDAARNEAITEATRQK
                     ELAQAEIDAAANRAREDLRKQVSALAVTGAEKLLKREIDANAHKALLDELASEI"
     gene            3684..4211
                     /locus_tag="QEL58_001451"
     CDS             3684..4211
                     /locus_tag="QEL58_001451"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019304550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit delta"
                     /protein_id="HDS1675931.1"
                     /translation="MSQALTLARPYARAAFATARDEGAFAPWSDALAFSAHVAADPRV
                     AALLANPELGRDDAVALLAPVTHGETYSRFLAILADSHRLPLLPEISGMFDALRAEAE
                     HVVKATVTSAAELSAGELDAIKVALRKRFNREVDVTTAVDASLIGGAVIDAGDVVIDG
                     SLKGKLARLQTALAN"
     gene            4256..5803
                     /locus_tag="QEL58_001452"
     CDS             4256..5803
                     /locus_tag="QEL58_001452"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014161761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit alpha"
                     /protein_id="HDS1675932.1"
                     /translation="MATTLNPSEISELIKNRIEKVKLAAESRNEGTVTSVSDGIVRIF
                     GLADVMQGEMIELPNNTFALALNLERDSVGAVVLGDYEHLREGDVAKTTGRILEVPVG
                     PELLGRVVNALGEPIDGKGPLGTDLTAPVERVAPGVIWRKSVDQPVQTGYKSVDAMIP
                     IGRGQRELIIGDRQTGKTAMAIDAVINQKGTGIKCVYVAIGQKASTIANIVRKLEENG
                     ALAHTIVVAATASESAAMQYISAYSGCTMGEYFMDRGEDALIVYDDLSKQAVAYRQIS
                     LLLKRPPGREAYPGDVFYLHSRLLERAARVSEEYVEKFTEGKVTGKTGSLTALPIIET
                     QAGDVSAFVPTNVISITDGQIFLETDLFNAGIRPAVNAGISVSRVGGSAQTKIIKKLS
                     GGIRISLAQYRELAAFAQFASDLDEATRKQLERGQRVTELMKQKQYAPMSIANQALSI
                     YAVNEGYLDDVPVNKLLAFEEGLHAHFANTQGELVSKVNATGGWDNDIEGAFKKGIAE
                     FKTTGSW"
     gene            5901..6764
                     /gene="atpG"
                     /locus_tag="QEL58_001453"
     CDS             5901..6764
                     /gene="atpG"
                     /locus_tag="QEL58_001453"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010371995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit gamma"
                     /protein_id="HDS1675933.1"
                     /translation="MASGREIKTKIKSVQNTRKVTRALEMVSASKIRKAQDRMKTSRP
                     YAQAMKQVIGHLAQASTDYQHPFLVEREQVKRVGFIVISSDRGLAGGLNNNLFRKMLG
                     EAKAWQDKGAEVDLVTIGQKASTFFRRVKVNMVGSVTHIGDVPKLESLIGVIKVMLDA
                     FTEGKVDRVYLVYNRFVNTMTQKASFDQLLPLPPAEKQVAHHDWDYLYEPDAATVLEH
                     VMTRYIESLVYQALLENVASEHAARMVAMKAASDNANKLIGTLQLVYNKARQAAITQE
                     ISEIVGGAAAV"
     gene            6802..8208
                     /gene="atpD"
                     /locus_tag="QEL58_001454"
     CDS             6802..8208
                     /gene="atpD"
                     /locus_tag="QEL58_001454"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014504697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit beta"
                     /protein_id="HDS1675934.1"
                     /translation="MSQGKIVQIIGAVVDVEFPRESVPKVYDALKVDNTEITLEVQQQ
                     LGDGVVRTIALGSTDGLKRNLIATNTNRGISVPVGAGTLGRIMDVLGRPIDEAGPVAA
                     SDSWEIHRAAPSYEDQSPATELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMME
                     LINNIAKAHSGLSVFAGVGERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRV
                     ALTGLTMAEYFRDEKDENGKGKDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTL
                     AEEMGVLQERITSTKNGSITSIQAVYVPADDLTDPSPATTFAHLDSTVTLSRSIASLG
                     IYPAVDPLDSTSRQMDPLVIGHEHYDTAQRVQQTLQKYKELKDIIAILGMDELSEEDK
                     QAVSRARKIERFFSQPFHVAEVFTGSPGKYVPLKDTIRGFKAIVDGEYDHLPEQAFYM
                     VGGIEEAVEKAKKMAEKA"
     gene            8322..8744
                     /locus_tag="QEL58_001455"
     CDS             8322..8744
                     /locus_tag="QEL58_001455"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011407577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit epsilon"
                     /protein_id="HDS1675935.1"
                     /translation="MSTIRCDIVSAEQEIFRGEATLVVATGELGELGIAPKHAPLITR
                     LKPGKVVVTTPNGEQLDFAISGGILEVQPQVVTVLADTAIRAQDIDEASVRKAKEEAE
                     RILANRGEAMEIAEAQQKLAEAVVQLQALERLRKTLKH"
     gene            complement(8921..9307)
                     /locus_tag="QEL58_001456"
     CDS             complement(8921..9307)
                     /locus_tag="QEL58_001456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005411126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GtrA family protein"
                     /protein_id="HDS1675936.1"
                     /translation="MSLLRQGSAYLVIGALQLLLDWAAFVLATAAGVPVVPGNLAGRL
                     AGMLLGFWLNGRITFATADGQQRLGWRRFARFLPLWLLLTTASTLLVSAADHALGLQY
                     AWLAKPLVEGGLAAVSFLLMRYVVYR"
     gene            9391..10758
                     /gene="glmU"
                     /locus_tag="QEL58_001457"
     CDS             9391..10758
                     /gene="glmU"
                     /locus_tag="QEL58_001457"
                     /EC_number="2.3.1.157"
                     /EC_number="2.7.7.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015463628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-N-acetylglucosamine
                     diphosphorylase/glucosamine-1-phosphate
                     N-acetyltransferase GlmU"
                     /protein_id="HDS1675937.1"
                     /translation="MTQPLHVIILAAGAGKRMKSVLPKVLQPIAGEPMLAHVIAAARE
                     LQPAAIHVVYGHGGEAVRQHFADQPDLQWAEQAQQLGTGHAVAQAMPQVPDAAQVLVL
                     YGDVPLIRAQTLRDLLAQPGRLAVLVAEVDDPTGYGRVLRDAEGKVGSIVEQKDATDD
                     QLRVRTINTGIIAAESTALRRWLSQLSNSNAQGEYYLTDVFAFAAHEYTPAEMALVAD
                     AQEAEGANDPWQLSQLERAWQRRAVRALCAQGARVRDPARLDIRGTVTVGSDVLIDVD
                     VVLEGNIVLGDGVTVGPFNRLKDVNLGPGTEVRAHCDLEGVVTEGAALVGPFARLRPG
                     TVLADGVHVGNFVETKKVTLGVGSKANHLTYLGDAVIGSKVNIGAGTITCNYDGVNKS
                     TTTIGDNAFIGSNSSLVAPVTIGESATIAAGSVITRNAPDGKLTLARARQETIDGWKR
                     PLKKS"
     gene            10727..11260
                     /locus_tag="QEL58_001458"
     CDS             10727..11260
                     /locus_tag="QEL58_001458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008267358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDS1675938.1"
                     /translation="MAGSARSRSPEPRVPHADELGVLPGIEQRAGEVLKGHEAYPVFA
                     GHGLDLSTLREGLQRGQLWVVDAAGGGIAGYLLAGELCGEFHVLQMDVDPVHARRGHG
                     RALLRHALAQARASGFAAAVLTTLSDVPWNAAFYASEGFDVVPEAEWDDGLRAVMAEE
                     AALGFPMHLRVAMRRVW"
     gene            complement(11317..12669)
                     /locus_tag="QEL58_001459"
     CDS             complement(11317..12669)
                     /locus_tag="QEL58_001459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010481333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing histidine kinase"
                     /protein_id="HDS1675939.1"
                     /translation="MKRRSFTFRLFLRLLPVLALAAALPWLLAYWMDHGWVITTVSTL
                     VLLSLMWWTLRRATAPVRSLMRALSGTTSSYRDGEYNFGVHWPGNDELGDLVQAHREL
                     GDVLRAQRQGLVQRELLLDTMVQNTPVAMLLIASGGDGIARVVFSNLAARKLLHGGWK
                     LEGQRLEDVLEQVPVELRDAIARGGDSLFAVHAEGEDGDEEDEQVYHLSRRAFQLNGR
                     PHDLLLVRLLTAELRRQEVQTWKKVIRVISHELNNSLAPIASLAHSGGVLVQRERFDR
                     LPEIFTTIEDRARHLEGFIRGYARFAKLPQPQLQTVHWAPFLSSLRQQIPFTMEREPD
                     EALSSRIDIAQFGQALLNLLKNAHEACAEADPPNDDVQVQLTRLPQWLRLDVLDRGKG
                     MNEQVLQNALMPFYSTKRNGTGLGLALTREIVEAHGGRVSLQNRGDGGLCVSILLPAG
                     "
     gene            complement(12666..14012)
                     /locus_tag="QEL58_001460"
     CDS             complement(12666..14012)
                     /locus_tag="QEL58_001460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016901003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54-dependent Fis family transcriptional
                     regulator"
                     /protein_id="HDS1675940.1"
                     /translation="MPSILIIDDNASVGTALDVLFSLHDIDTLQAQSPTEGLALLESQ
                     PVDLVIQDMNFSEDTTSGEEGEALFAQIRERHPDLPVILLTAWTHLSSAVDLVKAGAA
                     DYLAKPWDDRKLLTTVNNLLELSEARRELDRRRSRELRQRNALEEKYDLCGAVFADPA
                     SERVIALACQVARSELPVLITGPNGAGKEKIAQIIQANSLVAKGPFITVNCGALPSEL
                     IEAELFGAEAGAYTGANKAREGKFEAADGGTLFLDEIGNLSLGGQMKLLRVLETGRFE
                     RLGSNRERQVKVRVVSATNADLPAMIRDGTFREDLYYRLNTVELVLPPLAERPGDIVP
                     LAERFLASDKPLSSAAATALQRHPWPGNVRELRNVIQRAQLLAIGSRIEVADLNLPRT
                     AAAPRPAPGAGNDPDRARIEDVLARNHGVIAQAAAELGLSRQALYRRMDRHGIPRE"
     gene            complement(14134..14514)
                     /locus_tag="QEL58_001461"
     CDS             complement(14134..14514)
                     /locus_tag="QEL58_001461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008264523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PDZ domain-containing protein"
                     /protein_id="HDS1675941.1"
                     /translation="MRACWLLLMLLPSLPALAGSSSAQTLEWRQQDARLALRSTEGQV
                     RVEAAAPEARFGVRSGDRILRVDDTAVRRIEHLTEALRHSTAPTAYLLLRRDRRELTV
                     PVNAAAWRLALVAPAPPPPPPPPR"
     gene            complement(14516..15733)
                     /locus_tag="QEL58_001462"
     CDS             complement(14516..15733)
                     /locus_tag="QEL58_001462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HDS1675942.1"
                     /translation="MDIRPILSTLRRHKTAAALIVLEVALTCAIVCNALFLVSQRVDK
                     ISMPSGIAENELVMLRVSGIGEQTNAMARTREDLAALRAIPGVTSATIINQVPFRNGS
                     SSSSISREVDQERPTTNASMYTLSEGGLGTMGINLIAGRDFLPGEYIEFKEASKGGAK
                     QKAIPVILTQSTAAKMEPNGSALGKTYYMGKQPLNVVGIVDTLSTPNGWNDNWTNSML
                     LPLQRSFDEGGTYVLRTDPARRQEVLDAAAAALERIDPNRLMRDKLTYEDQRKDFFKN
                     DRAMVGLLITVSISLLVVTALGIIGLASFWVQQRSKQIGIRRALGATRGQILRYFQTE
                     NFLLATLGIVLGMLAAYAINLALMNMYELPRMPLYYLPLGALLLWALGQIAVFGPARR
                     AAAVPPAVATRGA"
     gene            complement(15754..17052)
                     /locus_tag="QEL58_001463"
     CDS             complement(15754..17052)
                     /locus_tag="QEL58_001463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012512164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDS1675943.1"
                     /translation="MFAYYARLAARSFRRNKVLTALMVVAIALGIGASMTTLTVFHVL
                     SGDPIPGKSDRLFYVQLDAATGAYVAGEEPETQLTRFDGEALLREAKGERQALMSGGG
                     GTIEPDNSTLKPFSIDTRWTSADFFPMFEVPMQYGRPWTREDDNARARVVVISKALND
                     KLFQGANSVGRDVRMEGQSYRVVGVMKEWSPEPHFYDLTTGSYGKDEDLLLPISTSFD
                     LKLGNNGNMNCFGENPDGNSYSLNAPCAWLQYWVELDPSKAADYRRYLENYSTQQREA
                     GRFKHPPNVRLRTVMEWLDFNGAVPSDVRLQLWLALGFLGVCLVNTVGLLLAKFLRRS
                     GEIGVRRALGASRGQIFLQCLVEAGAVGVVGGVLGIGLALLGLYAVRQQPVDYAQLAH
                     LDGSMLLLALGLTLFASLAAGFLPAWRAMQVTPAIQLKSQ"
     gene            complement(17063..17788)
                     /locus_tag="QEL58_001464"
     CDS             complement(17063..17788)
                     /locus_tag="QEL58_001464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005411118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDS1675944.1"
                     /translation="MYMLEMRSVAKVFRTEQVETHALRSLELQVKEGEFVAVTGPSGS
                     GKTTFLNIAGLLETFTSGTYMLDGQDVSTLGDDARSRLRNQKIGFIFQGFNLIPDLNL
                     FDNVDVPLRYRKMSANERRERIEKALTQVGLGSRMKHYPNELSGGQQQRAAIARALAG
                     SPRLLLADEPTGNLDTQMARGVMELLEEINAAGTTIVMVTHDPELAARAQRNVHIVDG
                     QVTDLVREPVLATPVRHIVAVNE"
     gene            complement(17824..19101)
                     /locus_tag="QEL58_001465"
     CDS             complement(17824..19101)
                     /locus_tag="QEL58_001465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017157227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HDS1675945.1"
                     /translation="MIRDTSAQDQIVSSAPASATRANWHRYRWPAAGALVLLAGIGWA
                     VHAWSNASRSFDGSRVRIAEVKRGDLVRDIAADGRVIAANSPILYAISAGTVDLKVVA
                     GDVVKKGQELAIIDSPELRSKLAQEQATLAGLEAEASRAALDATLARAKSRKETDQAT
                     IERQAADRDLQRYQRGYDGGAVPQIDLAKAKDSLKKADITLANATTDARLQSQGADLD
                     ARNKRLLADRQKAVVAEVQRQVDALTLRAPFDGQVGQVQAIQSTNLAANAPVLGVVDL
                     SKFEVEIKVPESFARDLAIGMPAQLTGGNGQPFPGEISAVSPEVVNGEVNARVRFASA
                     QPEGLRQSQRMSVRVLLDTRRNVLKVERGPFVEQGNGIAYVMDGRTAVRRPVELGVSS
                     LGEVEIKSGVQSGDRIVVSGSDLFKDAERVSVN"
     gene            19305..21143
                     /gene="glmS"
                     /locus_tag="QEL58_001466"
     CDS             19305..21143
                     /gene="glmS"
                     /locus_tag="QEL58_001466"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017159863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate transaminase
                     (isomerizing)"
                     /protein_id="HDS1675946.1"
                     /translation="MCGIVGAIADRDVVPVLIEGLKRLEYRGYDSSGIAVIDQGARPE
                     VRRVRRTGRVSEMATAAEAEGFNAVLGIGHTRWATHGGVTEANAHPHISQGVALVHNG
                     IIENHEEQRERLRALGYTFESQTDTEVIAHLIHHHLKDGDDLLLALQHTVKELTGAYA
                     LAVVSRAEPERFVCARMGCPLLVGLGEGENFVASDVSAVISATRKVIFLEEGDTAEIR
                     RDGVRVFDEHDQPVERDVHLSDVSLASLELGPYRHFMQKEIHEQPRALGDTIEAAIDA
                     GGFPAELFGKNAEAVLSGIEGVQIIACGTSYYAGLTARYWIEAIAGLPCSVEIASEYR
                     YRAAYANPKHLIVTISQSGETLDTMEALKYAKSLGHKHTLSICNVPESAIPRASELVC
                     YTRAGAEIGVASTKAFTTQLAALFQLTVVLGKLRGRIDAAQEADYLEQLRFLPGSVQH
                     ALNMEPQIAAWAERFARKSSALFLGRGLHYPIALEGSLKLKEISYIHAEAYPAGELKH
                     GPLALVDEDMPVVVIAPNDSLLEKVKSNMQEVRARGGELFVFADQDSNFNESEGVHVI
                     RTPRHAGVLSPIVHTIPVQLLAYHTALARGTDVDKPRNLAKSVTVE"
     gene            21591..22022
                     /locus_tag="QEL58_001467"
     CDS             21591..22022
                     /locus_tag="QEL58_001467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005411115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HDS1675947.1"
                     /translation="MNVRELLQSKKEAVITIDAEDTIGAAAHKMSANRIAALVVMKDD
                     APVGIISEKDIVRTLADDGPQAGRRVISSVPTTGLEGIAPEATLKQAMSLMTYSRRRH
                     LMVTEGTRLVGILSLGDIVKNLLGELELEKAVLQDIYMAAH"
     gene            complement(22090..22518)
                     /locus_tag="QEL58_001468"
     CDS             complement(22090..22518)
                     /locus_tag="QEL58_001468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017159330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HDS1675948.1"
                     /translation="METMELHRGRLIDHLQLVVRDLAASRRFYQAVFDTIGVPIAGEG
                     DDYFWADELFISSASSEAAAGQLTGRHHLAFQARDNATVDAFHRAAIAAGGTDNGAPG
                     ERPYHPGYYGAFVLDPDGNNIEVVYHGPARYSADSVKVTF"
     gene            complement(22610..23125)
                     /gene="gloA"
                     /locus_tag="QEL58_001469"
     CDS             complement(22610..23125)
                     /gene="gloA"
                     /locus_tag="QEL58_001469"
                     /EC_number="4.4.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016849953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactoylglutathione lyase"
                     /protein_id="HDS1675949.1"
                     /translation="MTIPALRDVPGVAAQAPAETTGFVFNHTMLRVKDITASLDFYTR
                     VLGYQLIDKRDFPEAQFSLYFLAYVPAGAVVPEDDAQRRLWMAGLPGVLELTHNHGTE
                     AQDGAVYHDGNSDPRGFGHICVSVPDIEAACQRFEDLGVTFQKRLTDGRMKNLAFIKD
                     PDGYWVEIIAN"
     gene            23252..24364
                     /locus_tag="QEL58_001470"
     CDS             23252..24364
                     /locus_tag="QEL58_001470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005419477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent cysteine synthase family protein"
                     /protein_id="HDS1675950.1"
                     /translation="MSQREWVAAAIRKIEADFNRSADTHLIPLALPGFEGIELYLKDE
                     SSHPTGSLKHRLARSLFLYALANGWLREGRPVIEASSGSTAVSEAYFARLLGLPFIAV
                     IPATTSPEKFAAIEFHGGRCHLVERACDLNCDSEKLARETGGHFMDQFTYAERATDWR
                     ANNNIAESIFKQMAEEPSPIPEWIVCSPGTGGTAATLGRYVSYRRHDTRILCADPEVS
                     VFFDGYKAAVAGEPDWRGLTCSGGSRVEGIGRPRVEPSFIPTSVDAMVKVPDALSLAA
                     MRHVSRQLGRRVGGSTGTNFIGVLQAAQWMREAGHQGSIVSILCDSGERYAQSYYDPA
                     WYVRQGIDVERADAQLAAAVAGQGLPELPWSSLEAL"
BASE COUNT         4208 a         7902 c         8118 g         4137 t
ORIGIN      
        1 cgagagctgc tgccaaagcc gcctggatgc ctgacacgcg gagggagcgg gggctgtgtg
       61 cgaagtaaag gaggaggtgc cggccgcagg ccggcgccgg gggacattcg cacgcagccc
      121 ccgctccctc cagcgctcga cccagccgct cttgctcctg cacaccgggg aaaacagcac
      181 aaaaaagcgc ggccccgatg atccggaggc cgcgccagga gagacagtgc cgtggaaggg
      241 gcgggggatc agaacacgaa gctgacgcct gccaccgggc ccttgaattc ctgcttcagg
      301 ccgacggtgc cgtcgctgcc cttcttgtcc acgtccagct tgaaccagtc gtatccggcg
      361 aacacgccga agttcttggt gaagcggtaa tcgacgatgg cattggcgcg gctcagatcg
      421 cccttgtagt catcgaagct gccccaacgc gtgttcaggt actggccctg cagcgtgatc
      481 atccagcgct cggacggggt gaaggtcatg cgcgcaccca ccaccggcgc gatgccgtcg
      541 gccttctcgt cgaggaactg gccttcgtac acggtgccca gatcggcata acccttggtg
      601 ctgaccttgg cgtactcgcc accgatctgc aggccgaggt cgaaggtgtc ggtatcgacg
      661 accgaatagt catagaccag gctggccacc tggtacttca gttcaccctt cacgaagctg
      721 ccggccggca cgttctcgcc gccgaaggaa atgccctggt ccagtgtctc gcggcgatcc
      781 ttgtcgtact tgaagtagtt gaacagcagg cgctggcggt tgctgatgcg gaacatgccg
      841 tcgatgcgcg gctcccattc cttgccaccc agcttgaagt cctggtccag ggcgatgtcc
      901 tggccagcca cgttggtcct gccgcggagc gtgttgtccg aatcgatgtt catcgcaccc
      961 aggcggatgg cgaaacggtc gtcgccttcc gcggcgtggg cggcattggc gaacgaagcg
     1021 ccggcggcga gcagggagag ggcgagcagg gtgggaacgg agcgcatcga agagtccttg
     1081 cagtggttca tcagaatgaa gaccactgtg ccggacggcg gcgtccacca tccgtgaacg
     1141 tatggtccac gcgatgtgca cggttcagcg ctgtcgcgac gatgcaaaaa gatggccccg
     1201 gagccgggct tcggggccat cgtgggacct gcggggcgaa gcgtcgacga ggttgctgca
     1261 ggcaggtcga aagatcggac cggcgcattc ggcgaaagtt ccgcagcctg cgaccaaagt
     1321 tcaatactgc gctgcagcat catgcggacg tcattgtccc ctgggtggca cgcaaaaatg
     1381 taaccgttac cgcaacttgc ggcctcctgg gatgaacagg gagcggttgt ctcgcaaatt
     1441 gtcccattgc tataatttgg cggctcgatg aggccccctc tgctgtagcc gcctcagccc
     1501 tccacttgca accacgcggg acgtcctgtg ctgaactccg ttgatgcggg tcggcgactg
     1561 atgctgcgcg ccgcggtcta cccgctggcc gcggtcgctg tcctggccct ggccttcctg
     1621 ctggtgggtc cgaagtatgc cctcggcgcg ctggcgtccg gtgtggccat ttcggccggt
     1681 ggctgggtgg cagcgcggat ggcactgagc gggggagccg tggccgcagg atcggcgatg
     1741 gctcgcctga tcattgcgat cgtggccaag tgggtggtgg ttttcggcgt cctgctggtg
     1801 gggttcctgg tcttcaagct gcctgcattg gcgctgttgg ccggtatcgc cgtcggcttg
     1861 atgttccagg tcctggccat ggccaggcgt tgacagaatt caattaactg aaggttccgg
     1921 acacatggcg ggcgaggctc taacccctac cagctacatc cagcatcacc tgcacaacct
     1981 gaccgcgccg gtcggcaagg gtgagggtat gttctggcat atccacgtcg ataccttcct
     2041 caccgcggtc ctgatgggcc tggtgatcgt ggtcgcgttc tggctgggca cccgcaaggc
     2101 caccgccggc gtgccgggca agtggcaggc cttcgtcgag atctgcctgg agttcgtcga
     2161 ccgccaggcc aaggacacct accacggcaa gagcaagctg gtcacgccga tcgccatcac
     2221 gatcttcttc tggatcctga tgatgaacct gatcaagatg atcccggccg acttcatcgc
     2281 caagccgctg gaatgggcgg gcatccacta ctggaagccg gtgccgaccg ccgacgtcaa
     2341 tgccaccctg ggcatggcca tcagcgtgtt cttcctgatg ctgttcttcg cactgaagtc
     2401 gaagggcctg ctgggcttca tcaaggaatt cctgacggcg ccgttcggca agtggatgat
     2461 gccgttcaac ctgatcctca acatcgtcga gtggctgagc aagccgatct cgctggcgat
     2521 gcgactgttc ggcaacatgt tcggcggcga aatcgtgttc ctgctgatct gggtgctggg
     2581 tggtgccggt ttcttcggtg ccattgccgg tggtgcgttc ggcctcggct ggatgctgtt
     2641 ccacctgctg gtgatcccgc tgcaggcctt catcttcatg atgctgtcga tcgtgtacct
     2701 gagcctgtcg gaagacgctc actgagtttc aagcttcaac gcgtttcaac cttcatccgt
     2761 ttcatcaccc ttagcaactt aagttcctgg agataaccat gtacttcgcc gtcctgacca
     2821 acttcgcgca gattcagagc tccaccgccc ttgccgtcgg catcatgatc ggcctggccg
     2881 cgctgggcgc cggtctgggt ctggccatca tggctggtaa gttcctggag tcggccgccc
     2941 gccagccgga actgatcccg gtcctgcagg tccgcatgtt catcaccgcc ggcctgatcg
     3001 acgccgcgtt catcatctcg gtcgccgtcg gcctgctgct ggccttcgcc aacccgctgt
     3061 cggctgcctt cgctggcgcc gtcaccaagg ctctggccgg ctgatacagc ggtttgagac
     3121 gaccgggtgc tgatgcaccc ggtttcggat gaaggccgga tgcgccgcta cggcggcgcg
     3181 tccaccccga aaccagcgat cgagctaacc atgaatatca atttcaccct tcttgcgcag
     3241 gcgctcgcct tcgctggtct gatctggatc atcgcgacca agatctggcc gccgctgatg
     3301 aacgcgatcg aagagcgcca gcagaagatt gctgaaggcc tcgctgctgc cgaccgcagc
     3361 cagaaagatc tggcccaggc gcaggagaag gtcaacgaag cgctgaaaga agcacgcacc
     3421 aaggccaacg agatcatcga ccaggcccac gcgcgcgcca accagatcgt tgatgctgcc
     3481 cgtaacgaag cgatcaccga agccacccgt cagaaggaac tggcccaggc tgaaatcgac
     3541 gccgccgcca accgtgcccg tgaagatctg cgcaagcagg tgtccgcgct ggccgtgacc
     3601 ggtgccgaaa agctgctcaa gcgcgaaatc gacgccaacg cccacaaggc gctgctcgac
     3661 gagctggcct cggagatcta aggatgagcc aggccctcac gcttgcccgc ccgtacgccc
     3721 gcgccgcgtt cgcgaccgcg cgcgacgaag gcgcgttcgc gccgtggtcg gacgccctgg
     3781 cgttctccgc ccacgtcgcc gccgacccgc gcgtggcggc cctgctcgcc aacccggagc
     3841 tgggccgtga cgacgccgtc gccctgctgg cgccggtgac ccacggcgag acctactcgc
     3901 gcttcctggc catcctggcc gactcgcatc gtctgccgct gctgccggaa atctccggca
     3961 tgttcgatgc cctgcgcgcc gaagccgagc acgtggtcaa ggccaccgtg acctcggcgg
     4021 ccgagctgtc ggccggtgag ctggatgcga tcaaggtcgc gctgcgcaag cgcttcaacc
     4081 gcgaggtcga cgtgaccacc gcggtcgatg cctcgctgat cggcggcgcc gtgatcgacg
     4141 ccggcgacgt ggtcatcgat ggttcgctga agggcaagct ggcccgtctg cagaccgcgc
     4201 tcgctaactg aattcattta acgtccggcc ccgctgccgg cactaggact tgacgatggc
     4261 aaccacgctc aacccctccg aaatcagcga actgatcaag aaccgcatcg agaaggtcaa
     4321 gctggccgcg gaatcgcgca acgaaggcac cgtgaccagc gtgtccgacg gcatcgtgcg
     4381 catcttcggt ctggccgacg tgatgcaggg cgaaatgatc gaactgccga acaacacctt
     4441 cgccctggcc ctgaacctgg agcgcgactc ggtcggcgcc gtggtcctgg gtgactacga
     4501 gcacctgcgc gaaggcgacg tcgccaagac caccggccgc atcctggaag tgccggtcgg
     4561 tccggaactg ctgggccgcg tcgtgaacgc gctgggcgag ccgatcgacg gcaagggccc
     4621 gctgggcacc gacctgaccg ctccggtgga gcgcgttgct ccgggcgtga tctggcgcaa
     4681 gtcggtcgac cagccggtgc agaccggtta caagtcggtc gacgccatga tcccgatcgg
     4741 ccgtggccag cgcgagctga tcatcggtga ccgccagacc ggcaagaccg ccatggcgat
     4801 cgacgcggtg atcaaccaga agggcaccgg catcaagtgc gtgtacgttg cgatcggcca
     4861 gaaggcttcg accatcgcca acatcgtgcg caagctggaa gagaacggcg cgctggccca
     4921 caccatcgtg gtggccgcga ccgcttccga atcggctgcc atgcagtaca tcagcgccta
     4981 ctcgggctgc accatgggtg agtacttcat ggaccgcggc gaagacgcgc tgatcgtgta
     5041 cgacgatctg tccaagcagg ccgtggccta ccgccagatc tcgctgctgc tgaagcgccc
     5101 gccgggccgt gaagcctacc cgggtgacgt gttctacctg cactcccgtc tgcttgagcg
     5161 cgctgcccgc gtgtccgagg aatacgtcga gaagttcacc gaaggcaagg tcaccggcaa
     5221 gaccggttcg ctgaccgcgc tgccgatcat cgaaacccag gccggcgacg tgtccgcctt
     5281 cgttccgacc aacgtgatct cgatcaccga cggccagatc ttcctggaaa ccgacctgtt
     5341 caacgccggc atccgcccgg ccgtgaacgc cggtatctcg gtgtcgcgcg tcggtggctc
     5401 ggcccagacc aagatcatca agaagctgtc gggtggcatc cgtatctcgc tggcccagta
     5461 ccgtgagctg gctgcgttcg cgcagttcgc ctcggacctg gacgaagcaa cccgcaagca
     5521 gctggagcgt ggccagcgcg tcaccgagct gatgaagcag aagcagtacg cgccgatgtc
     5581 gatcgccaac caggcgctgt cgatctacgc cgtcaacgag ggttacctcg acgacgtgcc
     5641 ggtcaacaag ctgctggcgt tcgaagaagg cctgcacgcc cacttcgcca acacccaggg
     5701 cgaactggtc agcaaggtca acgccaccgg cggttgggac aacgacatcg aaggtgcctt
     5761 caagaagggc atcgccgagt tcaagaccac cggcagctgg taatcgcggt cctgtagagc
     5821 ggagccaccg gctccgctgg accagatgac aaacggttga acaacgcggg gcatcagccc
     5881 cgcgccacgg gaaacaagag atggcaagcg gacgcgaaat caaaaccaag atcaagagcg
     5941 tgcagaacac ccgcaaggtg acgcgcgccc tggaaatggt ctcggcctcc aagatccgca
     6001 aggcgcagga tcggatgaag acctcgcgtc cgtacgcgca ggcgatgaag caggtgatcg
     6061 gccacctggc ccaggccagc accgactacc agcatccgtt cctggtcgag cgcgagcagg
     6121 tcaagcgggt cgggttcatc gtgatctcct ccgatcgcgg cctggccggc ggcctgaaca
     6181 acaacctgtt ccgcaagatg ctgggcgaag ccaaggcatg gcaggacaag ggtgccgaag
     6241 tggacctggt gaccatcggc cagaaggcat cgaccttctt ccgccgcgtg aaggtcaaca
     6301 tggtcggcag cgtgacccac atcggcgacg tgccgaagct ggaatcgctg atcggtgtga
     6361 tcaaggtcat gctcgacgcc ttcaccgaag gcaaggtcga ccgcgtgtac ctggtctaca
     6421 accgcttcgt gaacaccatg acgcagaagg ccagcttcga tcagctgctg ccgctgccgc
     6481 cggctgagaa gcaggtcgct caccacgact gggattacct gtacgaaccc gatgccgcga
     6541 ccgtgctgga gcacgtgatg acgcgttaca tcgagtcgct ggtgtaccag gcactgctgg
     6601 aaaacgtcgc ctccgagcat gcggcacgca tggttgcgat gaaggcggcg agcgacaacg
     6661 ccaacaagct gatcggcacc ctgcagctcg tctacaacaa ggcgcgccag gcagcgatca
     6721 cccaggaaat ctccgaaatc gtcggcggcg cggcagcagt ctgaccgcgt tcgttcaaag
     6781 cacacattag aggatgcagc aatgagtcag ggcaagatcg ttcagatcat cggcgcggtc
     6841 gtcgacgtcg aattcccgcg tgagtcggtg ccgaaggtgt acgacgcact gaaggtcgac
     6901 aacaccgaaa tcacccttga agtccagcag cagctgggcg acggcgtggt gcgcaccatc
     6961 gccctcggtt ccaccgatgg cctgaagcgc aacctgatcg ccaccaacac caaccgcggc
     7021 atctccgtgc cggtcggtgc tggcaccctg ggccgcatca tggacgtgct cggccgtccg
     7081 atcgacgaag ccggcccggt ggccgccagc gacagctggg aaatccaccg tgcggccccg
     7141 tcgtacgaag accagtcccc ggccaccgaa ctgctggaaa ccggcatcaa ggtcatcgac
     7201 ctgatgtgcc cgtttgccaa gggcggcaag gtcggcctgt tcggcggcgc cggcgtcggc
     7261 aagaccgtca acatgatgga gctgatcaac aacatcgcca aggcgcacag cggtctgtcc
     7321 gtgttcgccg gcgtgggtga gcgtacccgt gagggcaacg acttctacca cgaaatgaag
     7381 gactccaacg tcctcgacaa ggtggcgatg gtgtacggcc agatgaacga gccgccgggc
     7441 aaccgtctgc gcgtcgccct gaccggcctg accatggccg agtacttccg cgacgagaag
     7501 gatgaaaacg gcaagggcaa ggacgtcctg ctgttcgtcg acaacatcta ccgctacacc
     7561 ctggccggta ccgaagtgtc ggcactgctg ggccgtatgc cgtcggccgt gggttaccag
     7621 ccgaccctgg ccgaggaaat gggcgtcctg caggaacgca tcacctcgac caagaacggt
     7681 tcgatcacct cgatccaggc cgtctacgtt cccgcggacg acctgaccga cccgtcgccg
     7741 gcgaccacct tcgcccacct ggactcgact gtcaccctgt cgcgttcgat cgcctcgctg
     7801 ggtatctacc cggccgtcga tccgctggac tccaccagcc gccagatgga cccgctggtc
     7861 atcggccacg agcactacga caccgcccag cgcgtccagc agaccctgca gaagtacaag
     7921 gaactgaagg acatcatcgc catcctgggc atggacgaac tgtccgaaga agacaagcag
     7981 gccgtgtcgc gcgcccgcaa gatcgagcgc ttcttcagcc agccgttcca cgtggccgaa
     8041 gtgttcaccg gttcgccggg caagtacgtg ccgctgaagg acaccatccg tggcttcaag
     8101 gccatcgtcg atggcgagta cgaccacctg ccggagcagg cgttctacat ggtcggcggc
     8161 atcgaagaag cggtcgagaa ggccaagaag atggccgaga aggcctgatc cgggacgggc
     8221 gggagcgatc ctgcccgacc tgacgccggt gccgggcaac cgcccgcacc ggtggactcc
     8281 cacggtggca ttgcgccgcc gcgaacagcg aagagatttg catgagcacg atccgttgcg
     8341 acatcgtcag cgccgagcag gaaatcttcc gtggcgaagc gaccctggtc gtggccaccg
     8401 gtgagctggg cgaactgggc atcgcgccca agcacgcgcc gctgatcacc cgcctgaagc
     8461 cgggcaaggt ggtggtgacc acgccgaatg gcgagcagct ggatttcgcc atttccggcg
     8521 gcatcctgga agtgcagccg caggtggtga ccgtgctggc cgacaccgcg atccgcgcac
     8581 aggacatcga cgaagcctcg gtccgcaagg ccaaggaaga agccgagcgc atcctggcca
     8641 accgtggtga agccatggaa attgccgaag cccagcagaa gctggccgag gccgtggtgc
     8701 agctgcaggc gctggagcgc ctgcgcaaga ccctcaagca ctgaggttca cgctgcaccc
     8761 acgagaacgc cggccttgtg ccggcgtttt tgttggtgcc gaccgcactg ggtagagtcg
     8821 accgttgctc gactatcgcg cgcagcgcgg gtttttcgcg gcctgatcga aaggcagtcg
     8881 actgacagtc gactctatag atccggatcc ccacctcgta tcagcgatac accacgtagc
     8941 gcatcagcag gaacgagaca gcggccagcc cgccttccac cagcggcttg gccagccagg
     9001 cgtactgcag gcccagcgca tgatccgcgg cagataccag cagcgtgctg gccgtggtga
     9061 gcagcagcca cagtggcagg aagcgcgcga agcggcgcca gcccagccgt tgctggccat
     9121 cggccgtggc gaaggtgatc cgcccgttca accagaaacc cagcagcatg ccggccagtc
     9181 gcccggccag gttgcccggt accacgggca cgcccgccgc cgtggccagc acgaacgccg
     9241 cccagtcgag cagcagctgc agcgcgccga tgacgaggta ggcgcttccc tggcggagca
     9301 ggctcatggt tggcgtgagg acgggcaggc ccccatgtta gcggcccacg cactagaatc
     9361 atcggcaacg aaccacagat tgccgttgcc atgacccaac ccctgcacgt catcatcctc
     9421 gccgccggcg cgggcaagcg catgaaatcg gtgctgccga aagtgctgca gccgatcgcc
     9481 ggcgagccga tgctggcaca tgtgattgcc gcggcacgtg agctgcagcc tgccgccatc
     9541 cacgtggtct acggtcatgg cggtgaagcg gtgcggcagc actttgcgga tcagcctgac
     9601 ctgcagtggg ccgagcaggc ccagcagctg ggcacgggcc atgcggtggc gcaggcgatg
     9661 ccgcaggtgc ccgatgctgc acaggtgctg gtgctgtacg gcgacgtgcc gctgatccgc
     9721 gcgcagaccc tgcgtgacct gctggcgcag ccgggccgcc tggcggtgct ggtcgccgag
     9781 gtcgacgacc ccaccggcta cggccgcgtg ctgcgcgatg ccgagggcaa ggtgggctcg
     9841 atcgtcgagc agaaggatgc cactgacgat caactgcgcg tacgcacgat caataccggc
     9901 atcatcgcgg ccgagtcgac cgcactgcgc cgctggctgt cgcagctttc caacagcaat
     9961 gcacagggtg agtactacct gacggatgtc ttcgcctttg ctgcccacga gtacacgccg
    10021 gccgagatgg cgctggtcgc cgacgcgcag gaggccgaag gcgcgaacga tccctggcag
    10081 ctgtcgcagc tggagcgggc ctggcagcgg cgcgcggtgc gtgcgctgtg cgcgcagggg
    10141 gcgcgcgtgc gagatccggc gcggctggat atccgcggta ccgttaccgt cggcagcgat
    10201 gtgctgatcg acgtcgacgt cgtgctggaa ggcaacatcg tgctcggcga tggcgtcacc
    10261 gttggcccgt tcaaccgtct gaaggacgtc aatctcgggc cgggcacgga agtgcgcgca
    10321 cactgcgatc tggaaggcgt ggtcaccgag ggcgctgcgc tggtcggccc gttcgcgcgc
    10381 ctgcgcccag gtaccgtgct ggccgatggc gtgcacgtcg gcaacttcgt cgaaaccaag
    10441 aaggtcaccc tcggcgtcgg cagcaaggcc aaccatttga cctatctggg cgacgcggtc
    10501 atcggcagca aggtgaacat cggtgccggc accatcacct gcaactacga cggcgtgaac
    10561 aagtcgacca ccaccatcgg cgacaacgcg ttcatcggtt ccaacagctc gctggtggca
    10621 ccggtgacca tcggcgaaag cgcaaccatc gccgccggtt cggtcatcac ccgcaacgcg
    10681 ccggatggca agctgaccct ggcacgcgca cggcaggaaa ccatcgatgg ctggaagcgc
    10741 ccgctcaaga agtcctgagc cccgcgttcc gcacgccgat gaactcggcg tgctgccggg
    10801 gatcgagcag cgcgctggcg aggtgttgaa gggccacgag gcctatcccg tgttcgcggg
    10861 tcatgggctg gatctgtcga cactgcgcga gggccttcag cgtggtcagc tatgggtcgt
    10921 ggatgccgcc gggggcggca ttgccggtta cctgctggcg ggcgagctgt gcggtgaatt
    10981 ccatgtgctg cagatggacg tcgacccggt gcatgcgcgt cgcggccatg gccgtgcgtt
    11041 gctgcggcat gcattggcgc aggccagggc ctccggcttt gctgcagcgg tgctgaccac
    11101 cttgagcgac gtgccgtgga atgcagcttt ctatgccagc gaagggttcg acgtagtgcc
    11161 tgaggcggag tgggacgacg gcctgcgcgc cgtcatggcc gaagaggctg cgctcgggtt
    11221 tccgatgcac ctgcgggtgg cgatgcgacg ggtctggtag gagccgactt cggtcggcac
    11281 atccacgcat ggcgtggatc taccccatcg atccactcaa cccgccggca gcaggatcga
    11341 cacgcacaac ccgccatcgc cgcgattctg cagcgacacc cgcccgccat gcgcctccac
    11401 gatctcgcgg gtcagcgcca gccccaatcc ggtgccattg cgcttggtcg aatagaacgg
    11461 catcagcgcg ttctgcagta cctgctcgtt catgcccttg ccgcggtcca gcacgtccag
    11521 gcgcagccat tgcggcagcc gtgtcagctg cacctgcacg tcatcgttgg gcggatcggc
    11581 ttccgcgcag gcttcgtgcg cgttcttgag caggttcaac agtgcctgcc cgaactgcgc
    11641 gatgtcgatg cggctgctca gcgcctcgtc cggctcgcgc tccatggtga acggaatctg
    11701 ctggcgcagg ctggacagga acggcgccca gtgcacggtc tgcagctgtg gctggggcag
    11761 cttggcaaag cgcgcatagc cacggatgaa gccctccagg tggcgcgcac ggtcttcgat
    11821 ggtggtgaag atttccggca gccggtcgaa gcgttcgcgc tgcaccagca cgccgccgga
    11881 atgggccagc gaagcgatcg gcgccagcga attgttgagc tcgtggctga tcacccggat
    11941 caccttcttc caggtctgca cctcctggcg gcgcagttcg gcggtcagca ggcgtaccag
    12001 cagcaggtcg tgcgggcggc cgttgagctg gaacgcgcgg cgtgagaggt ggtagacctg
    12061 ctcgtcttcc tcgtcgccgt cctcgccttc ggcatgcacc gcgaacaggc tgtcgccgcc
    12121 gcgggcgatc gcgtcgcgca gctccaccgg cacctgctcc agcacatcct ccaggcgctg
    12181 gccttccagc ttccagccgc cgtgcagcag cttgcgcgcg gccaggttgg agaacaccac
    12241 gcgggcgatg ccatcgccgc cggacgcgat cagcagcatc gccaccggcg tgttctgcac
    12301 catggtgtcg agcagcagtt cgcgctgcac cagcccttgc cgctgcgcac gcagcacatc
    12361 gcccagctcg cggtgcgcct gcaccaggtc gcccagctca tcattgcccg gccagtgcac
    12421 gccgaagttg tactcaccat cgcggtagct gctggtggtg ccggagagcg cgcgcatcag
    12481 cgagcgcacc ggtgcggtcg cgcggcgcag ggtccaccac atcagcgaca gcaggaccag
    12541 cgtcgatacc gtggtgatca cccagccgtg atccatccag tacgccagca gccacggcaa
    12601 cgcggcagcc agcgcgagca ccggcagcag gcgcaggaac aggcggaagg tgaacgagcg
    12661 ccgcttcatt cgcgcggaat gccgtggcgg tccatgcgcc ggtacagcgc ctggcggctg
    12721 agcccgagct cggccgcggc ctgcgcgatc acgccatggt tgcgtgccag cacatcctcg
    12781 atgcgcgcgc gatcaggatc attgccggca cccggtgccg ggcgcggtgc cgccgcagtg
    12841 cgcggcaggt tgaggtcggc cacttcgatg cggctgccga tggccagcag ctgggcgcgc
    12901 tggatcacat tgcgcagttc gcgcacattg ccgggccacg gatgccgctg cagcgccgtg
    12961 gccgcggcgc tggacagtgg cttgtcggag gccaggaagc gctcggccaa cggcacgatg
    13021 tcgcccgggc gttcggccag tggcggcagc accagttcca ccgtgttgag gcggtaatag
    13081 agatcttcgc ggaaggtgcc gtcgcggatc atggccggaa ggtcggcatt ggtcgcactg
    13141 accacgcgca ccttgacctg gcgctcgcgg ttggagccca ggcgctcgaa gcgaccggtt
    13201 tccagcacgc gcagcagctt catctgcccg cccagcgaca ggttgccgat ctcgtcgagg
    13261 aacagggtgc caccgtcggc tgcttcgaat tttccttcgc gtgccttgtt ggcgccggtg
    13321 taggcaccgg cctcggcgcc gaacagttcc gcttcgatca gttccgacgg cagcgcgccg
    13381 cagttgaccg tgatgaacgg ccccttggcc accagcgaat tggcctggat gatctgcgcg
    13441 atcttctcct tgcctgcgcc gttggggccg gtgatcagca ccggcagctc cgagcgcgcg
    13501 acctggcagg ccagggcgat gacacgctcg ctggccgggt cggcgaacac ggcgccgcac
    13561 aggtcgtact tctcttccag tgcgttgcgc tggcgcagtt cacggctgcg acgccggtcc
    13621 agttcgcgac gcgcctcgga caactccagc aggttgttga ccgtggtcag cagcttgcgg
    13681 tcgtcccacg gcttggccag gtagtcggcg gcaccggcct tgaccaggtc caccgcgctg
    13741 ctcagatggg tccaggccgt gagcaggatc accggcaggt cagggtggcg ttcgcggatc
    13801 tgcgcgaaca gggcctcgcc ttcttccccg gacgtggtgt cctcgctgaa gttcatgtcc
    13861 tggatcacca ggtcgaccgg ctgcgactcg agcagtgcca ggccctcggt cgggctctgt
    13921 gcctgcaggg tgtcgatgtc gtgcagggag aacagcacgt ccagcgcggt acccacgctg
    13981 gcgttgtcgt cgatgatcag gatcgaaggc atcaagcggt tctgcagaaa gggatgggcg
    14041 gcgccgttgg agccgttcgt gtccacacgc cgggagagcc cggcgccacc catcaagcat
    14101 agccaaaccc gtggccgcag gcgcggtccg ggcctaccgc ggcggagggg gcggtggcgg
    14161 cggcgccgga gcaaccagtg ccaggcgcca ggcagccgca ttcaccggca cggtcagttc
    14221 gcgcctgtcg cggcgcagca acaggtaggc ggtgggggcg gtggagtggc gcagggcttc
    14281 ggtcagatgc tcgatcctgc gcacggcggt gtcatccacg cgcaggatgc ggtcaccgct
    14341 gcgcacgccg aagcgggctt cgggggctgc ggcttccacc cgcacctggc cttcggtcga
    14401 gcgcagcgcc agccgtgcat cctgctggcg ccactccagc gtctgcgcgc tgctgctgcc
    14461 ggccagggcc ggcagggatg gaagcagcat cagcagcagc cagcaggcgc gcatctcagg
    14521 cgccccgggt ggcaaccgcc ggcggtaccg ctgcggcacg ccgggccggc ccgaacaccg
    14581 cgatctggcc cagtgcccac agcagcagcg cacccagtgg caggtaatac agcggcatgc
    14641 gcggcagctc gtacatgttc atcagggcga ggttgatggc gtaggccgcc agcatgccca
    14701 gcacgatgcc cagtgtggcc agcaggaagt tctcggtctg gaagtagcgc aggatctgcc
    14761 cgcgggtagc gccgagcgcg cggcggatgc cgatctgctt gctgcgctgc tgcacccaga
    14821 agctggccag gccgatgatg cccagcgcgg tgaccaccag cagcgagatg ctgacggtga
    14881 tcagcaggcc gaccattgcc cggtcgttct tgaagaagtc cttgcgctgg tcctcatagg
    14941 tcagcttgtc gcgcatcagc cggttggggt cgatgcgttc cagcgccgcg gccgcagcat
    15001 cgagtacttc ctggcgccgt gccggatcgg tccgcagcac gtacgtgccg ccttcatcga
    15061 aggagcgctg cagcggcagc agcatcgaat tggtccagtt gtcgttccag ccattgggcg
    15121 tgctgagcgt gtcgacgata ccgaccacgt tcaagggttg cttgcccatg tagtaggtct
    15181 tgcccagcgc gctgccgttg ggctccatct tcgcggcagt gctctgggtg aggatcaccg
    15241 ggatggcctt ctgcttggca ccgcccttgg aggcttcctt gaactcgatg tactcgccgg
    15301 gaaggaagtc gcggcccgcg atgaggttga tccccatcgt gcccagcccg ccttcggaca
    15361 gggtgtacat cgacgcattc gtggtcgggc gctcctggtc gacctcgcgg gagatgctgc
    15421 tgctggacga gccgttgcgg aacggcacct ggttgatgat ggtggcactg gtgacgccgg
    15481 gaatcgcgcg cagtgccgcc aggtcttcgc gggtgcgcgc catggcattg gtctgctcgc
    15541 cgatgccact gacacgcagc atcaccagtt cgttctcggc gatgccgctg ggcatgctga
    15601 tcttgtcgac gcgctggctg accaggaaca gtgcgttgca gacgatggcg caggtcagtg
    15661 cgacttccag cacgatcagg gcggcagcgg tcttgtgccg gcgcagggtg ctgaggatgg
    15721 ggcggatgtc catgggagtc ctcgttctcg tgcttactgc gacttgagct ggatggccgg
    15781 ggtgacctgc atcgcgcgcc aggccggcag gaagccggcg gcaaggctgg cgaacagggt
    15841 caggcccagt gcgagcagca gcatgctgcc gtccagatga gcgagctgcg cgtagtccac
    15901 cggttgctgg cgcaccgcgt acaggccgag cagggccagc ccgatgccga gcacgccgcc
    15961 taccacgccg accgcaccgg cttcgaccag gcactgcagg aagatctgcc cacggctggc
    16021 gcccagggcg cggcgcacgc cgatctcacc gctgcggcgc aggaacttgg ccagcagcag
    16081 gcccaccgtg ttgaccaggc agacgccgag gaagcccagt gccagccaca gctgcaggcg
    16141 cacgtcgctg ggcaccgcgc cgttgaagtc cagccattcc atcacggtgc gcaggcgcac
    16201 gttcggcggg tgcttgaagc ggccggcctc gcgctgctgg gtcgagtagt tttccaggta
    16261 gcggcggtag tcggcggcct tggacgggtc cagctccacc cagtactgca gccaggcgca
    16321 aggtgcattg agcgagtagc tgttgccgtc ggggttctcg ccgaagcagt tcatgttgcc
    16381 gttgttgccg agcttgaggt cgaacgaagt ggagatcggc agcagcagat cttcgtcctt
    16441 gccgtagctg ccggtggtca gatcgtagaa gtgcggctcc gggctccact ccttcatcac
    16501 gccgaccacg cgatagctct ggccttccat gcgcacgtca cgccccacgc tgttggcacc
    16561 ctggaacagc ttgtcgttga gtgccttgga gatgaccacc acgcgggcgc gggcgttgtc
    16621 atcctcgcgc gtccaggggc gaccgtactg catgggtacc tcgaacatcg ggaagaagtc
    16681 ggccgaggtc caacgggtgt cgatgctgaa gggcttgagc gtgctgttgt ccggctcgat
    16741 ggtgccgccg ccgccgctca tcagcgcctg gcgctcaccc ttggcttcgc gcagcagtgc
    16801 ttcaccgtcg aagcgggtca actgggtttc cggctcctcg ccggcgacat aggcgccggt
    16861 cgcggcgtcg agctgcacgt agaacagccg gtcgctcttg ccgggaatcg ggtcgccgga
    16921 cagtacgtgg aagacggtca gcgtggtcat cgaggcgccg atgccgagtg cgatggcaac
    16981 caccatcagc gcggtcagga ccttgttgcg gcggaagctg cgcgccgcca gtcgggcgta
    17041 gtaggcgaac atgatcgggc cctcactcgt tgacggcgac gatgtggcgc acgggcgtgg
    17101 ccagcaccgg ctcacgcacc aggtcggtca cctggccatc gacgatgtgc acgttgcgct
    17161 gcgcgcgcgc ggccagttcc gggtcgtggg tgaccatcac gatggtggtg ccggcggcat
    17221 tgatttcctc cagcagctcc atcacgccgc gtgccatctg cgtatccagg ttgccggtcg
    17281 gttcgtcggc cagcagcagg cgcgggctgc cggccagggc gcgtgcgatc gccgcgcgct
    17341 gctgctggcc gccggacagt tcattcgggt agtgcttcat gcgtgagccc aggccgacct
    17401 gggtcagtgc cttctcgatg cgttcgcggc gctcgttggc gctcatcttt cggtaacgca
    17461 gcggcacgtc aacgttgtcg aacaggttga ggtccgggat caggttgaag ccctggaaga
    17521 tgaagccgat cttctggttg cgcaggcggc tgcgggcatc gtcgcccagc gtgctcacgt
    17581 cctgcccgtc cagcatgtag gtgccgctgg tgaaggtttc cagcaggccg gcgatgttga
    17641 ggaaggtggt cttgccggag ccggacgggc cggtgacggc gacgaactcg ccttccttga
    17701 cctgcagttc cagcgagcgc agtgcgtggg tttccacctg ttcggtgcgg aagaccttgg
    17761 cgaccgaacg catttcgagc atgtacatgg ggtgtcctct ctccaggatt cagggttctg
    17821 atatcagttg acggagacgc gttcggcgtc cttgaacagg tcgctgccgg agaccacgat
    17881 gcggtctccc gattgcacac ccgacttgat ttccacttcg cccaggctgc tgacgcccag
    17941 ttccaccgga cggcgcacgg cggtgcggcc atccatcacg taagcgatgc cgttgccctg
    18001 ttcgacgaac gggccacgct cgaccttcag cacgtttctg cgggtatcga gcagcacgcg
    18061 caccgacatc cgctggctct ggcgcaggcc ctcgggctgc gcgctggcaa agcgcacgcg
    18121 ggcgttgacc tcgccgttga ccacctccgg cgacaccgcg ctgatctcgc ccgggaacgg
    18181 ctggccgttg ccgccggtca gctgtgcggg catgccgatc gccaggtcac gggcgaagct
    18241 ctccggaacc ttgatctcga cttcgaactt ggacaggtcg accacgccca gcaccggcgc
    18301 gttggcggcg aggttggtgg actggatcgc ctgcacctgg ccgacctggc catcgaacgg
    18361 cgcgcgcagg gtcagtgcat cgacctggcg ctggacttcg gccaccacgg ccttctggcg
    18421 atcggccagc agccgcttgt tgcgtgcgtc caggtcggcg ccctggctct gcaggcgtgc
    18481 atcggtggtg gcgttggcca gggtgatgtc ggccttcttc agcgagtcct tggccttggc
    18541 caggtcgatc tgcggcaccg caccgccgtc gtagccgcgc tggtagcgct gcaggtcgcg
    18601 gtcggcggcc tgccgttcga tggtggcctg gtcggtttcc ttgcgcgact tggcgcgggc
    18661 cagggtcgcg tccagcgcgg cgcggctggc ctcggcttcc aggccggcca gggtggcctg
    18721 ttcctgggcc agcttgctgc gcagttccgg gctgtcgatg atcgccagtt cctggccctt
    18781 cttgaccacg tcgccggcga ccaccttcag gtccacggta ccggccgaga tggcgtacag
    18841 gatcgggctg ttggcggcga tcacccggcc gtcggcggcg atgtcgcgga ccaggtcgcc
    18901 ccgcttcact tcggcgatgc gcacgcggct gccgtcgaag gagcggctgg cgttggacca
    18961 ggcgtgcacg gcccagccga tgccggccag cagcacgagg gcgcccgccg ccggccaacg
    19021 gtagcggtgc cagttggcgc gggtggcgct ggccggtgcg gaggaaacga tctggtcctg
    19081 ggcggaagtg tcgcggatca tcggatgcgt gccttgcggt ggtagccaat accaagcacg
    19141 tagcgtgcca actttattct gtttcagatc aacggtttgg cggactcgtc gcggtgtccg
    19201 ggtgtccgcg gacacctttc cggacacttt cattaagcgg acaggagggg gaacccgggc
    19261 acgcaggcta gaatgcgccg atcgtcttca aggaattgcg tgacatgtgt ggaatcgtgg
    19321 gtgcgatcgc cgatcgcgac gtagtgccgg tgctgatcga gggcctgaag cgacttgaat
    19381 accgcggcta cgattcctcg ggcatcgccg tgatcgacca gggcgcccgg ccggaggtcc
    19441 gccgcgtgcg ccgtaccggt cgtgtgtcgg aaatggctac ggcggccgag gctgaaggct
    19501 tcaatgcagt gctcggcatc ggccacaccc gttgggccac ccatggcggt gtcaccgaag
    19561 ccaacgcgca cccgcatatc agccagggcg tggcgctggt gcacaacggc atcatcgaga
    19621 accacgaaga gcagcgcgaa aggctgcgcg cgctgggcta caccttcgaa tcccagaccg
    19681 acaccgaagt catcgcgcac ctgatccatc atcatctcaa ggatggcgac gacctgctgc
    19741 tggcgctgca gcacacggtg aaggagctga ccggtgccta cgcactggcc gtggtcagcc
    19801 gtgccgagcc ggagcgcttc gtctgcgcgc gcatgggctg cccgctgctg gtcggcctgg
    19861 gcgagggcga gaacttcgtc gcctccgatg tctcggcggt gatctcggcc acccgcaagg
    19921 tgattttcct tgaagaaggc gacacggccg agatccgccg cgacggtgtg cgcgtcttcg
    19981 acgagcatga ccagccggtc gagcgcgacg tgcatctgtc cgatgtgtcg ctggcctcgc
    20041 tggaactggg cccgtaccgc cacttcatgc agaaggaaat ccacgagcag ccgcgtgcgc
    20101 tgggcgacac catcgaggcg gcaatcgacg ccggtggttt cccggccgaa ctgttcggca
    20161 agaacgccga agcggtgctg tcgggcatcg aaggcgtgca gatcatcgcc tgcggtacca
    20221 gctattacgc cggcctgacc gcgcgctact ggatcgaagc catcgccggc ctgccgtgca
    20281 gcgtggagat cgccagcgaa taccgctacc gcgccgccta tgcgaacccg aagcacctga
    20341 tcgtcaccat ctcccagtcc ggcgaaacgc tggatacgat ggaagcgctg aagtacgcca
    20401 agtcgctggg ccacaagcac acgctgtcga tctgcaacgt gccggaaagt gcgatcccgc
    20461 gcgccagcga gctggtctgc tacacccgcg ccggtgccga gatcggcgtg gcctcgacca
    20521 aggccttcac cacccagctg gccgcgctgt tccagctgac cgtggtgctg ggcaagctgc
    20581 gtggccgcat cgacgcagcg caggaagcgg actacctgga gcagctgcgc ttcctgccgg
    20641 gcagcgtgca gcacgcactg aacatggagc cgcagatcgc ggcatgggcc gagcgtttcg
    20701 cgcgcaagag cagcgcgctg ttcctgggcc gcggcctgca ctacccgatc gcgctggaag
    20761 gctcgctcaa gctcaaggaa atctcctaca tccacgccga agcctatccg gcgggcgagc
    20821 tgaagcacgg cccgcttgcg ctggtggacg aggacatgcc ggtggtggtg atcgccccca
    20881 acgacagcct gctggagaag gtgaagtcga acatgcagga agtgcgcgcc cgtggtggcg
    20941 agctgttcgt gttcgccgac caggacagca acttcaacga gtccgaaggc gtgcacgtga
    21001 tccgcacgcc gcgccacgcc ggcgtgctca gcccgatcgt gcacaccatt ccggtgcagc
    21061 tgctggcgta ccacaccgca ctggcgcgtg gcaccgacgt ggacaagccg cgcaatctgg
    21121 ccaagagcgt gacggtggag taacgccggc tgctcgacct ggatgcggta cacgaagggg
    21181 gcccatgtgg ccccctttcg tttgcgccga caaccgcatc aagtgggaca gtccccggtc
    21241 gttctgtccg ccgtcggcag gccgcaatca atctttaatg cgcaatgccg cctgtattca
    21301 gcggcggttt cagccgcggt gccattctct ggatcgtcgc ttggttccca cgacgaactg
    21361 tcctatcgat gccggtagtg accgatggtc gcagtcgtag aatcgaactg accgaggcat
    21421 gggttgagcg gttgagcccg cctcgttcgc gttgcagtac gtcgcctgcc gatgcatctc
    21481 ccagggcagg cacgtgcgcc agacgtgcgc tgaaaggtct gttcccgggg agggggcgta
    21541 tcggaagagc acactttttt gacttcagtg acctgcacca ggaaacaaga atgaacgtcc
    21601 gcgaactcct gcaatccaag aaagaagctg tcatcaccat cgacgccgaa gacaccatcg
    21661 gtgccgccgc ccacaagatg agcgcgaaca ggatcgctgc gctggtggtg atgaaggacg
    21721 atgccccggt cggcatcatt tccgaaaagg acatcgtgcg taccctggcc gatgacggcc
    21781 cgcaggccgg ccgccgggtg atttccagcg tgccgaccac cggcctggaa ggcattgcgc
    21841 cggaagcgac cctgaagcag gccatgtcgt tgatgacgta ctcgcggcgc cgtcatctga
    21901 tggtcaccga gggcacccgc ctggtcggca tcctcagcct gggcgacatc gtgaagaacc
    21961 tgctgggcga gctggagctg gaaaaggccg tgcttcagga catctacatg gccgcccact
    22021 gagggctgca gtgctggaag cagagaagcc gggcattgcc cggcttcttc gttcacggca
    22081 tcggtgaaat cagaaagtga ccttcaccga gtcggcgctg tagcgggccg gaccgtgata
    22141 gaccacttcg atgttgttgc cgtccggatc gagcacaaag gcgccgtagt agcccgggtg
    22201 gtaggggcgt tcgccgggcg cgccgttgtc ggtgccgccg gcggcgatcg cggcgcggtg
    22261 gaaggcatcg acggtggcgt tgtcgcgggc ctggaaggcc aggtggtggc gtccggtcag
    22321 ctggccggcg gcggcctcgc tgctggcgct ggatatgaac agctcatcgg cccagaagta
    22381 atcatcgcct tcgccggcga tcggcacgcc aatggtatcg aacaccgcct ggtagaagcg
    22441 gcggctggcg gccaggtcac gcaccaccag ctgcagatgg tcgatcagtc gcccgcggtg
    22501 cagttccatc gtttccatac caacctcgca aaaaagggga cggaggggat taagtcgctt
    22561 ccggccaata gtgccagaaa cggcttaatc ccctccgtcc cctttctggt cagttggcga
    22621 tgatctcgac ccagtagccg tccgggtcct tgatgaaggc caggttcttc atgcggccgt
    22681 cggtcaggcg cttctggaag gtcacgccga ggtcctcgaa gcgctggcag gcggcttcga
    22741 tgtccggcac cgacacgcag atgtggccga agccgcgcgg gtcgctgttg ccatcgtggt
    22801 agaccgcgcc gtcctgggcc tcggtgccat ggttgtgggt cagttccagc acgcccggca
    22861 ggccggccat ccacaggcgg cgctgggcat cgtcttccgg caccacggcg ccggccggca
    22921 cgtaggccag gaagtacagg ctgaactggg cctccgggaa gtcgcgcttg tcgatcagct
    22981 ggtaaccgag cacgcgggtg tagaagtcca gcgaggcggt gatgtccttc acccgcagca
    23041 tggtgtggtt gaacacgaag ccggtggtct cggccggggc ctgggcggcg acgccgggga
    23101 catcgcgcag ggcgggaatg gtcatggggg gagatccttc agacagggcc gttgccggcc
    23161 ggatgtcccc attctagcga gcagcacctg accgcaccgc gacgtacaat ggtcggatcg
    23221 caccgttccg tcccgatacc gatggcccgc catgtcgcag cgtgaatggg tggctgctgc
    23281 catccgcaag atcgaagctg atttcaaccg ttccgccgat acccacctga ttcctctggc
    23341 actgcctggg ttcgagggca tcgagctgta cctgaaggat gaatcgagcc atcccaccgg
    23401 aagcctgaag caccggttgg cgcgctcgct gttcctgtat gcgctggcca atggctggct
    23461 gcgcgagggc cggccggtga tcgaggcctc cagcggctcg accgcggtgt ccgaagccta
    23521 tttcgcgcgc ctgctcgggc tgccgttcat cgcggtgatc ccggccacca cctcgccgga
    23581 gaaatttgcg gcgatcgaat tccatggtgg ccgctgccac ctggtcgagc gcgcctgcga
    23641 cctcaactgc gattcggaaa aactggcccg cgaaaccggc ggccacttca tggatcagtt
    23701 cacctacgcc gagcgcgcca ccgactggcg tgccaacaac aacatcgccg aatccatctt
    23761 caagcagatg gccgaggaac ccagcccgat cccggaatgg atcgtgtgca gccccggtac
    23821 cggtggtacc gccgcgacgc tgggccgcta tgtcagctat cgccggcacg acacccgcat
    23881 cctgtgcgcg gacccggaag tctcggtgtt cttcgatggc tacaaggctg ccgtggccgg
    23941 tgagccggac tggcgaggac tgacctgcag cggtggttcg cgcgtggaag gcattggccg
    24001 gccgcgggtg gagccgagct tcatcccgac cagtgtcgat gcgatggtga aggtgcccga
    24061 cgcgctgagc ctggccgcga tgcgccatgt cagccgccag ctcggccgcc gcgtcggtgg
    24121 ttccaccggc accaacttca ttggtgtgct gcaggcggcg cagtggatgc gcgaggcggg
    24181 ccatcagggc agcatcgtca gcatcctgtg cgacagcggc gagcgttacg cgcaaagcta
    24241 ttacgacccg gcgtggtacg tgcggcaggg cattgatgtc gagcgcgccg atgcgcagct
    24301 ggcggcagcg gtggccgggc agggcttgcc ggaactgccg tggagcagcc tggaagcgct
    24361 gtagc
//
LOCUS       DAOKIP010000042        24121 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.042,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000042 DAOKIP010000000
VERSION     DAOKIP010000042.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 24121)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24121)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24121
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.042"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(8..265)
                     /locus_tag="QEL58_001471"
     CDS             complement(8..265)
                     /locus_tag="QEL58_001471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014038386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2789 domain-containing protein"
                     /protein_id="HDS1675951.1"
                     /translation="MITTEPRMTNLFLQLGLDASAEGIARFIRDHQLAADVEVVEAPY
                     WNDAQRQFLSESLQADAAWSTVVDELNESLHEDAVKAATGL"
     gene            372..959
                     /locus_tag="QEL58_001472"
     CDS             372..959
                     /locus_tag="QEL58_001472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012512028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biliverdin-producing heme oxygenase"
                     /protein_id="HDS1675952.1"
                     /translation="MNAHIAPEDSRSLRLKAATRDSHGALDKRIMAGDIFADRSNFAR
                     FLRVQYRFHRSIDALYANPALDALLPDLGERRRLKQVSRDLQDLEQTLPGADIAALPA
                     DLPLPAALGWLYVAEGSNLGGTILYKMAAKLGLDRDFGARHLAAHPDGAARHWREFTA
                     ALDAVPLSAEQEQQVIDAADAAFRSVHGHVEVEFA"
     gene            991..1458
                     /locus_tag="QEL58_001473"
     CDS             991..1458
                     /locus_tag="QEL58_001473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019662026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbaN family protein"
                     /protein_id="HDS1675953.1"
                     /translation="MRWLWFALGWVMVGLGVIGALLPVMPTTIFLILAVGCFARSSPK
                     FEQRLLAHPRYGPSLRLWREQGAVSRKGKAFASAGMAVGFALFCWGAHPSWRLLLGVG
                     LFFAVSAGYVLSRPAPRLEPNPVVEVDDANDPRTARRRAATPDADGNRDDAAC"
     gene            1424..2173
                     /gene="exbB"
                     /locus_tag="QEL58_001474"
     CDS             1424..2173
                     /gene="exbB"
                     /locus_tag="QEL58_001474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tonB-system energizer ExbB"
                     /protein_id="HDS1675954.1"
                     /translation="MLMETETMLPADLAPVAAPALTPWGMYLAADVVVKSVMIALALA
                     SLATWTVLLAKGWELVRQARQLRAARALLLQAPSLPAESAEASAQQGTALAMLEAART
                     ELRLSQDLDSRDGIKERVASRLDRIELETVRLQRRGIGVLASIGAVAPFVGLFGTVWG
                     IMNSFIGIAHSNTTNLAVVAPGIAEALLATALGLVAAIPAVLVYNHFSRVLAGLRGLL
                     GDLSAAVQQLVSRDLDRAVPRTAATPLRAVH"
     gene            2183..2608
                     /gene="exbD"
                     /locus_tag="QEL58_001475"
     CDS             2183..2608
                     /gene="exbD"
                     /locus_tag="QEL58_001475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012512025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB system transport protein ExbD"
                     /protein_id="HDS1675955.1"
                     /translation="MAIRTASDRDDAPEEAHEINVTPFIDVMLVLLIIFMVAAPLATV
                     SVPVQLPASSASATPPEQAPVYVTVQADLSLRVGEHPVARDGLAAALNAATHDDSGQR
                     IFLRADTHVPYGELMATLDALRAAGYLKVALVGLEQGAR"
     gene            2605..3324
                     /locus_tag="QEL58_001476"
     CDS             2605..3324
                     /locus_tag="QEL58_001476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005414389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HDS1675956.1"
                     /translation="MSGLRRWATSLAIVLLVHALLIGAACWWAARAPALAAAAPPAAL
                     MLELAPIAQAPPVPPREVATGPLQQQQQRQAPTPAVREQPKAPVQPQGDLPPPKAPEP
                     TPSPETADANVAQTSAPPQVAADAAARYTAPQTTAGERSRAEATWEGRLLGHLQKHRR
                     YPRQAERLRQQGVVFVRFAVARDGAVSGLKLGRSSGFELLDQETLDTVQRASPVPAPP
                     AEVAGDPVQVMVPVSFFLRGR"
     gene            complement(3444..5471)
                     /locus_tag="QEL58_001477"
     CDS             complement(3444..5471)
                     /locus_tag="QEL58_001477"
                     /EC_number="3.6.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011038412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-translocating pyrophosphatase"
                     /protein_id="HDS1675957.1"
                     /translation="MLERHGLSLALGCAILAILFGIVSARWILRQPTGNERMIAIATA
                     IQEGARAYLNRQYLTIGIAGVVLFVLVGIFLSWYTAIGFAVGAVLSGAAGYIGMNVSV
                     RANVRTAEAARHGISAAMDVAFRGGAITGMLVVGLGLLGVAGYYALLLRMGLPMEQAL
                     HALVGLAFGSSLISIFARLGGGIFTKGADVGADLVGKVEAGIPEDDPRNPAVIADNVG
                     DNVGDCAGMAADLFETYAVTVIATMLLGSLMLAEAGANAVLYPLVLGGVSIIASIIGA
                     LFVKVKPGGSIMGALYKGVIVSGVLAAIAFYPITTGLMGDNVHGPMALYGCALIGLVL
                     TGLIVWITEYYTGTQYKPVQHVAQASTTGHGTNIIAGLGISMKSTALPVVAVCAAIWG
                     AFALGGLYGIAIAATAMLSMAGMIVALDAYGPITDNAGGIAEMAELPSEIRDITDPLD
                     AVGNTTKAVTKGYAIGSAALAALVLFADYTHNLQAAHPGQEFRFDLSDHTVIIGLLIG
                     GLIPYLFGAMAMEAVGRAAGAVVEEVRRQFREIPGIMQGTGKPQYDRAVDMLTRSAIR
                     EMIVPSLLPVAVPVVVGLLLGPRALGGLLIGTIVTGLFVAISMTTGGGAWDNAKKYIE
                     DGHFGGKGSEAHKAAVTGDTVGDPYKDTAGPAINPLIKIINIVALLLVPLL"
     gene            5749..6252
                     /locus_tag="QEL58_001478"
     CDS             5749..6252
                     /locus_tag="QEL58_001478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006390041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675958.1"
                     /translation="MRLSLLMLAALVPAAPAFAAETPELQRAVGAPQAVGAAHTLRQI
                     PEACARLEGVFTGDAAEPYRFSAVRTSEQCQPRARFVDYAKAQPSTDKGWKLNDVIRV
                     PSAACPAQQAVVRVWRLPSSNKVELDGQGQSRIYLEEAKKQAAAGKIPQVTMFAAQLQ
                     MEGKACN"
     gene            complement(6325..6714)
                     /locus_tag="QEL58_001479"
     CDS             complement(6325..6714)
                     /locus_tag="QEL58_001479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF488 family protein"
                     /protein_id="HDS1675959.1"
                     /translation="MALRVVRLGTPRVAGEGLRIGTVRRPPRGVPRSEFARQDWYDVW
                     FPTLSPSAELVKQAHAAQSAADWNAFFRHYKVEMKAPDAAHALDLLAALSQHSDISVG
                     CYCEDEAHCHRKALRELLVARGAALAG"
     gene            complement(6833..8089)
                     /locus_tag="QEL58_001480"
     CDS             complement(6833..8089)
                     /locus_tag="QEL58_001480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019338784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphofructokinase"
                     /protein_id="HDS1675960.1"
                     /translation="MRNGTLLYAQSGGVTAVINATAAAVIEQARAKGIKVLAARNGIL
                     GALREELIDTSKESAAAIRALAHTPGGAFGSCRVKLKSLDADRARYDRLLEVLRAHDV
                     RWFLYNGGNDSADTALKVSQLAKASGYDLTCIGVPKTIDNDLAVTDTCPGFGSAAKYT
                     AVSVREAALDVAAMAETSTRVFIYEAMGRHAGWLAAAAGLAGNGDDEAPHIILLPERA
                     YDEALFLAKVKAVVERVGYCVVVASEGIATADGRFVADAGGGKDSFGHSQLGGVAAHL
                     AGRVKDQLGLKVHWALPDYLQRSARHLASKTDWEQAQAVGKAAVQLALKGQNGVMPVI
                     VRSSDAPYRWKIEAAPLSKIANHEKKMPAGFIRRDGFGITAKARAYLSPLIKGEAPLP
                     YGPDGLPKYVTLKNLAVKQKLPPFEG"
     gene            8226..8789
                     /locus_tag="QEL58_001481"
     CDS             8226..8789
                     /locus_tag="QEL58_001481"
                     /EC_number="2.7.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014038375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate kinase"
                     /protein_id="HDS1675961.1"
                     /translation="MRLVLLGPPGSGKGTQATRLKEKLGIAHISTGDMLRAEIAAGTE
                     LGKQAKTVMDAGNLVSDDILLGMLESRLTQADVAKGFILDGYPRNVAQANAMDGLLAK
                     IGQPLDAVVQLDVATELLVERIAGRAKEQGRADDTPEAVRQRLQVYNDQTAPVVDFYA
                     GRGTLARVDGVGELDEIEARILAAIKA"
     gene            9120..10484
                     /gene="mpl"
                     /locus_tag="QEL58_001482"
     CDS             9120..10484
                     /gene="mpl"
                     /locus_tag="QEL58_001482"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-
                     meso-diaminopimelate ligase"
                     /protein_id="HDS1675962.1"
                     /translation="MSSVHILAIAGTFMGGVAALARELGHPVSGSDQAIYPPMSTQLE
                     QLGITLDQGYRADSVPAGTDEVVIGNALSRGNAAVEAVLDAGQRYISGAQWLSERVLP
                     GRDTLAVAGTHGKTTTTTILTWLLESAGRSPGFLIGGVAEDFGVSARLGQGREFVVEA
                     DEYDTAFFDKRSKFVHYRPLVAILNNLEYDHADIFPDVAAIQRQFHHLVRTVPARGRL
                     IVNGEDKYLAEVLAMGCWTPVERFGFDPSLEWHAELLAADGSAFRVHHRGQALGDVQW
                     SLLGRHNVLNGLAALAAAHAVGVAPADVIPALARFRSVKRRMEVIGSVDGITVYDDFA
                     HHPTAIATTLEGLRAKVGDARIVVAMEPRSNSMRLGAHAQALAPSLALADEVVFLHRP
                     ELAWDAAAVIAAVRGQAHAVPDTDALLAQLQSHARSGDHVVFMSNGGFDGAPRRFLAA
                     LQAR"
     gene            10481..11059
                     /locus_tag="QEL58_001483"
     CDS             10481..11059
                     /locus_tag="QEL58_001483"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010484006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LON peptidase substrate-binding
                     domain-containing protein"
                     /protein_id="HDS1675963.1"
                     /translation="MSADGSLPLFPLHSTLVPGAAVGLRVFERRYLDLVRDSGRSGEG
                     FGVCLILDGQEVGAPATPAAYGVQVRIEDFDVGADGVLQLRLRGTRRFHVERTRVRDN
                     GLVVADVSWCEEDPDDELRPQHALLATVLGHIIEQAGEAYAPANPALLDQASWVGWRL
                     AELLPLSEQQRLQLLQMDDPHQRLQQLLGWMP"
     gene            complement(11188..13185)
                     /locus_tag="QEL58_001484"
     CDS             complement(11188..13185)
                     /locus_tag="QEL58_001484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019662013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VTT domain-containing protein"
                     /protein_id="HDS1675964.1"
                     /translation="MDSSWIDATLAWIAAHPVLAGAVIFLIAFCDAVIILGAIVPALP
                     LLFAVGVFIGLGQISGPYAVAAAALGAFAGDGISYWIGRRWGDRLRGIWPFSRYPQLL
                     DRGENLFRRNAFKSILIARYVGAIRPFVPAIAGMMKMPASRYMQASGIASISWAVLFL
                     APGWVLGEAYDAVAAVAGRLVVVVGLLMVILGLVWAIVLYGYRWSAARMDNWLARLLD
                     WSNRHPTLGRYTVGVLDPKRRESVPLAMLALMLLVLGWGWFALLTVVVAHGEPLAIDL
                     LVHQAMLALRNPLADYPMAALASLGAWQVLLPATAAAMGYLIWRRRWMAAAHWLAALA
                     FGLALTMLLGATVDVVRPVDASSGFGFPSVSVTMATITFGFFAVLIAREMPGRTRVWP
                     YLVSGIVVSLIGFSRLYLGAHWLSDVIGGMLFGTFWLLVLGIAYRRRFNRSFWVKPVA
                     WLFYGVFALAAMWYAPRHIPVKLERFEPTLPAPQAMDMQAWWQHDWSTLPARRNEFDD
                     DQRWPLDVQVAGPLAPLQAQLEARGWKRQEQAGWQEALLMLDKNTGADQLPVLPATLE
                     TRVEALLMVRQGAQPDERYVLRLWPAPAQLQPGDTPLWLGSAQTLRYERHFEWIGMWH
                     PLRGVDPAMNAVKEAVQGLPQREDVHGETGLPVLRLKTTAR"
     gene            13271..13933
                     /locus_tag="QEL58_001485"
     CDS             13271..13933
                     /locus_tag="QEL58_001485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006389922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine protein kinase"
                     /protein_id="HDS1675965.1"
                     /translation="MPHTPDAPPHALKADSFGRILLVKGPDGPFVRRDLGATPLWLRL
                     PAWWLARREARALQHIHGMPDVPQLLAWDGRHLDRSFMAGDAMYQRPPRGDVAWFHSA
                     RRLLQHLHRRGVAHNDLAKEANWLVTEDGRPALIDFQLAVIGDPRSRWMRLLAREDLR
                     HLLKHKRMYCRESLTPVEKRVLKRTSWVRELWFATGKPVYRFVTRRILHWEDNEGQGP
                     KP"
     gene            13930..14436
                     /locus_tag="QEL58_001486"
     CDS             13930..14436
                     /locus_tag="QEL58_001486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2867 domain-containing protein"
                     /protein_id="HDS1675966.1"
                     /translation="MRASQVVTAAPSAGSVLRAQMAGAHFVHACQASTQRGGRTALQA
                     YRDMAASIPGWFDGLMALRNRGMRLLGMKDLGSLRAVQDIEQPRPGQRLGIFTLQSLD
                     ADAIVLEDNDRHLRVQLALQWQGDVLEVATVVHTHNAFGRLYMLPVAPVHRLIVPHLL
                     QKQVRAYG"
     gene            complement(14548..15231)
                     /locus_tag="QEL58_001487"
     CDS             complement(14548..15231)
                     /locus_tag="QEL58_001487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005414380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675967.1"
                     /translation="MRRSRLLLPALGLALLTACQGRSPEPGKEPSAGDAPSAAKAAAD
                     GRMRWSEAVVWDGDLNACRQGENAATRDCLRDAMHAGGASADAITAAEQLSTGGELAY
                     VTAWHESDGLGVATVEYPFRANTNEGTRLVDASGKRIDVDAVQLDDTLRADPTVQELL
                     KANPQATPFAPAQSAGATPLENGGIRLLYRTPLRDCHACPDVGQLQIAYDFDAKRNFI
                     GQQVVPAAP"
     gene            15340..16158
                     /locus_tag="QEL58_001488"
     CDS             15340..16158
                     /locus_tag="QEL58_001488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005419027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HDS1675968.1"
                     /translation="MGSLQGKTLFITGGSRGIGLAIALRAARDGANVAIAAKSSVPNP
                     KLPGTIHSAAEAVTAAGGQGLALKCDIREEEQVQAAVAATVDTFGGIDILVNNASAIW
                     LRGTLDTPMKRFDLMQQVNSRGSFLCAQACLPYLLQAPNPHILTLAPPPSLEPKWWGP
                     HTGYTLAKMGMSFVTLGLAAEFGPQGVAVNALWPRTVIATDAINMIPGVDAAGCRTPQ
                     IMADAAHAVLVREAAGFHGRFLIDDEVLAQAGVTDLSGYAVDASRPLLPDLFLD"
     gene            16252..17244
                     /locus_tag="QEL58_001489"
     CDS             16252..17244
                     /locus_tag="QEL58_001489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014648302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YiiG family protein"
                     /protein_id="HDS1675969.1"
                     /translation="MSRTLSLAALAASLSLILGACGGKAPATAGDAGPSGKPDASTAS
                     SDAQQQLTAKLNAYIGCFNALDSKTHGSIESYTRWIKDVDAGPSGRETQVYGPFEISD
                     YDMKQCDAPVTEAIAAKPALADLDAAAGRYQQALKALVPLSKDAHDYYDRQDYEYDQF
                     AKGKQMHAPLMAAFKDFVVASETFNTALERHNDAAQREQLKALEQAEGRTREYYRLAM
                     MLEAKAIVELMTDDGFDQAAAREHLDAFNRISDEAHAKVADQQPGKTDWEGFERGAEN
                     FRREGKERLQRVSENKPYTDFERRMLDSPSMAPRGSASKLMQEYNALVFQSNRQ"
     gene            17422..18354
                     /locus_tag="QEL58_001490"
     CDS             17422..18354
                     /locus_tag="QEL58_001490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008267926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YiiG family protein"
                     /protein_id="HDS1675970.1"
                     /translation="MLPLLLLGSLAGLAGCNKPAGLAVADPGLVKVNAYIECYNGVEQ
                     PVHEGFQAYTGWMKDPEAGPTGKEAQPRSPGKVLSHRVEYCGQSMTDALAKTPALPMD
                     GPARDYQQAFQALNALTERADGYFTREDYRRDGGEGMRAQHAPLMQAYAAFFKASEAM
                     DVALEKNENERRAAELKRIEESEGRSLAYYHLRILGDGKQLAMAFQGDAPDLAVVRKQ
                     LADYQALVTEVQNGGVGKDDPMWGHVQRSADKLVRTAGRGVERLEQGKPISAEALAAE
                     RKASGSWLTTDPEGAQSTILDAYNDLVTTSNRLR"
     gene            complement(18425..19297)
                     /locus_tag="QEL58_001491"
     CDS             complement(18425..19297)
                     /locus_tag="QEL58_001491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005419021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ion transporter"
                     /protein_id="HDS1675971.1"
                     /translation="MRPFSAPQLNPATETGWRRRWFDIIYRHDSRPSRNFDLILVVAI
                     IASILVVMIDSVQHLHAEWSTGLYILEWGFTIIFTAEYLLRLAVVKRPLRYAVSIWGI
                     IDLLSILPAYLSLFIPGAQSLLVVRALRILRVFRILKLTRYIEESGVLMTSLWRSRRK
                     VLVFLFTVITITIIAGALMYVIEGPEHGFSNIPASMYWAVVTMATVGFGDIVPQTVLG
                     RFVTSVLILIGYSIIAVPTGIYTAELASTMREAELAARRDARGCPHCGLEGHEPDARH
                     CRRCGGELPDAFSH"
     gene            19361..20587
                     /locus_tag="QEL58_001492"
     CDS             19361..20587
                     /locus_tag="QEL58_001492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006467246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetylornithine transaminase"
                     /protein_id="HDS1675972.1"
                     /translation="MTAATDPLISLSHYYLPVYKPRQVVLERGQGARVWDSQGREFID
                     LAAGIAVCGLGHNDPDLVAALVEQAGKLWHTSNVFYSAPPLHLAEELVKASRFAERVF
                     LCNSGAEANEVAIKMVRKWASSQGRPADKRVIITFRGSFHGRTLGAVTATAQPKYQEG
                     YEPLPGGFRYIDFNDEVQLETAMAAGDVAAVMLEPIQGEGGVMPAKSGFLKRVRELCD
                     QHDALLVLDEIQAGMGRTGTLFAHWQDDVVPDMVTLAKALGGGFPIGAMLAGPKVAET
                     MQFGAHGTTFGGNPLAAAVARVALRKLASAEIATNVSRQSKALRDGFARINDEFGVFS
                     DVRGRGLMLGAVLSKDFAGQAGAILDHAAEQGLLTLQAGPDVLRFVPSLNITDEEVAE
                     GLKRLRAAIAAFIAAR"
     gene            complement(20621..21223)
                     /locus_tag="QEL58_001493"
     CDS             complement(20621..21223)
                     /locus_tag="QEL58_001493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008267502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IA family hydrolase"
                     /protein_id="HDS1675973.1"
                     /translation="MRIDLLLLDVDGVLVQYQRAQRVLHLAQALDVSPQAVQAALYDS
                     GLDAAHDRGALDGPTYLAQLGGLLGRTLDVAAWVAARQAASHPQVAVLQRLQALQLPM
                     AVLTNNGALMVQALPALLPDLFPALQDRVFCSADFGLRKPQPRVFQRVLEVLQVAPAR
                     TLFIDDLFANVRGARAAGLHAETVRDGRGLGKVLKRYAIL"
     gene            21346..21795
                     /gene="azu"
                     /locus_tag="QEL58_001494"
     CDS             21346..21795
                     /gene="azu"
                     /locus_tag="QEL58_001494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016851071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="azurin"
                     /protein_id="HDS1675974.1"
                     /translation="MKAWTVAVGLGALMLAPSAMARVCAVSIDSTDQMSFSSREIKIA
                     ADCSAVDLTLRHTGKLAATAMGHNWVLTRTADYQPVAMAGMRMTLADSYLPKADKRVL
                     AHTKVIGGGETTRVRFSTQALQKGGDYTFFCSFPGHFAMMKGKFIFG"
     gene            complement(21902..23191)
                     /gene="hemL"
                     /locus_tag="QEL58_001495"
     CDS             complement(21902..23191)
                     /gene="hemL"
                     /locus_tag="QEL58_001495"
                     /EC_number="5.4.3.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012512012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-1-semialdehyde 2,1-aminomutase"
                     /protein_id="HDS1675975.1"
                     /translation="MNHDQSHALFSRAQQLLPGGVNSPVRAFKSVGGEPFFVERADGA
                     YLYDVDGNRYIDYVGSWGPMIVGHNHPAVRQAVKKAIDNGLSFGAPCAAEVTMAETIT
                     RLVPSCEMVRMVNSGTEATLSAIRLARGATGRNRIVKFEGCYHGHGDSFLVKAGSGML
                     TLGVPTSPGVPAGLSELTLTLPYNDFEAATALFEQQGDDIAGLIIEPVVGNANCIPPR
                     EGYLQHLRELCTKHGALLIFDEVMTGFRVALGGAQAHYGITPDLTTFGKIIGGGMPVG
                     AYGGRGELMQQIAPAGPIYQAGTLSGNPVAMAAGLAMLELVQQPGFHADLAERTARLC
                     TGLEAAAAEAGVAVTTTRVGAMFGLFFTSEKVETYAQATACDIPAFNRFFHAMLDQGV
                     FLAPSAYEAGFLSSAHDDAVIEATLAAARVAFKAAKG"
     gene            complement(23208..23834)
                     /locus_tag="QEL58_001496"
     CDS             complement(23208..23834)
                     /locus_tag="QEL58_001496"
                     /EC_number="2.5.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014038359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HDS1675976.1"
                     /translation="MTSASPAPRGVYLITPDEPDTARLLVRTAPLLAAGATWLQYRNK
                     TASDALRQEQATALQGLCAAHGVPLIINDDPLLAKAVGAAGVHLGGTDGDIPSARALL
                     GAEAIIGASCYDQLANAEKAVAAGASYVAFGAFFPTTTKITSSRAHPDLLRQSAALGV
                     PRVAIGGLTPDNVGPIIDAGADLVAVVSSVFAAEDPVATQHALLAQFA"
     gene            23869..24093
                     /locus_tag="QEL58_001497"
     CDS             23869..24093
                     /locus_tag="QEL58_001497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006467103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rubredoxin"
                     /protein_id="HDS1675977.1"
                     /translation="MAARESSPDYPMSDATPTTLRTWMCVVCGFLYSEADGLPEEGIA
                     PGTRWEDIPETWTCPDCGVTKADFEMVEVD"
BASE COUNT         3985 a         8032 c         8317 g         3787 t
ORIGIN      
        1 cgcgtgctta cagaccggtc gcggccttca ccgcgtcttc gtgcagcgat tcgttcagct
       61 catccaccac cgtgctccac gccgcatcgg cctgcagcga ctcggacagg aattggcgct
      121 gggcgtcgtt ccagtacggt gcttcgacca cctccacatc ggcggccagc tggtgatcgc
      181 ggatgaaacg ggcgatgccc tcggcgctgg catccagtcc gagctgcagg aacaggttgg
      241 tcatgcgcgg ttcggtggtg atcatcatcg gttcctgcgg gaagaaggga tggtccatta
      301 tcggtgcaca cggccttggg gaaagccccg cggcgaacgt ctacagcacg acgaccccct
      361 tggcatcccc catgaacgca cacatcgccc ctgaagacag ccgcagcctg cggctcaagg
      421 ccgccacccg cgacagtcac ggcgcgctcg acaagcgcat catggccggc gacatcttcg
      481 ccgaccgcag caacttcgcc cgcttcctgc gcgtgcagta ccgcttccac cgcagcatcg
      541 acgcgctgta tgccaatcct gcgctggacg cactgctgcc ggacctcggc gagcgccgtc
      601 gcctgaagca ggtgtcacgc gacctgcagg acctggaaca gaccctgccg ggtgcggaca
      661 ttgctgcgct gccagccgac ctcccactgc cggcggcgct gggctggctg tacgtggccg
      721 aaggctccaa cctcggcggc accatcctgt acaagatggc cgccaagctg ggcctggatc
      781 gcgacttcgg cgcccgccac ctggccgcgc acccggatgg cgctgcccgc cattggcggg
      841 agttcaccgc tgcactggac gcggtgccat tgagcgccga gcaggaacaa caggtgatcg
      901 atgcggccga cgccgcgttc cgcagcgtgc atggccacgt cgaagtggaa ttcgcctgat
      961 gtacgccggc cgcctgcggg caccgcgctg atgcgctggc tctggttcgc gctgggttgg
     1021 gtgatggtcg gccttggggt catcggcgcg ctgctgccgg tgatgccgac caccatcttc
     1081 ctgatcctgg cggtgggctg cttcgcgcgc agctcgccga agttcgagca gcgcctgctg
     1141 gcgcatccgc gctatggccc gtcgctgcgg ctgtggcgcg agcagggcgc ggtttcgcgc
     1201 aagggcaagg catttgccag cgccggcatg gcggtgggct tcgcgctgtt ctgctggggg
     1261 gcgcacccgt cgtggcgcct gctgctgggc gtgggcctgt tcttcgcggt cagcgccggc
     1321 tacgtgctca gccgcccggc accgcggctg gagcccaatc cggtcgtgga agtcgacgat
     1381 gccaatgatc cgcgcacggc ccgccgccgt gccgcgaccc ccgatgctga tggaaaccga
     1441 gacgatgctg cctgctgacc tggcccccgt ggctgcccct gcactgacgc cctggggcat
     1501 gtacctggcc gccgacgtgg tggtgaagag cgtgatgatc gcgcttgcgc tggcatcgct
     1561 ggctacctgg accgtgctgc tggccaaggg ctgggagctg gtccggcagg cccgccagct
     1621 gcgtgcggcg cgcgcgctgt tgctgcaggc gccaagcctg ccggccgaaa gcgcggaggc
     1681 cagcgcacag caggggaccg cgctggccat gctggaggcc gcacgcaccg aactgcgtct
     1741 gtcgcaggat ctggacagcc gcgacggcat caaggagcgc gtcgcttcgc gccttgaccg
     1801 catcgaactg gagaccgtgc gcctgcagcg acggggcatc ggcgtgctcg ccagcatcgg
     1861 cgcggtggcg ccgttcgtgg gtctgttcgg cacggtgtgg ggcatcatga acagcttcat
     1921 cggcattgcc cacagcaaca ccaccaacct ggcggtggtc gcaccgggca tcgccgaggc
     1981 cttgctggcc accgcgcttg gcctggtcgc agcgattccc gcggtgctgg tctacaacca
     2041 tttcagccgc gtgctggccg gcctgcgtgg cctgctcggt gatctgtccg cggccgtgca
     2101 gcagctggtg tcgcgcgatc ttgaccgcgc cgtgccgcgt accgcagcga caccgctgcg
     2161 tgcggtgcac tgaggcgcgg cgatggcgat caggaccgca tccgaccgcg acgatgcgcc
     2221 ggaagaagcg cacgagatca atgtcacgcc cttcatcgac gtgatgctgg tgctgctgat
     2281 catcttcatg gtggccgcgc cgctggcgac cgtgtcggtg ccggtgcagc tgccggccag
     2341 cagcgccagc gccacgccgc cggaacaggc gccggtgtat gtgaccgtgc aggccgacct
     2401 gtcgctgcgg gtgggcgagc acccggtggc gcgcgatggg ctggcggccg cactgaacgc
     2461 cgcgacccac gatgacagcg gacaacgcat cttcctgcgt gccgataccc atgtgcctta
     2521 cggcgaactg atggcgaccc tggacgcgct gcgcgctgcc ggatacctga aggtggcact
     2581 ggtcgggctg gagcagggcg cgcgatgagc ggactgcggc gctgggcgac cagcctggcg
     2641 atcgtgctgc tggtgcacgc actgctgatc ggcgcggcct gctggtgggc ggcgcgcgcg
     2701 ccggcgctgg ccgccgccgc cccgcctgcg gcgctgatgc tggaactggc gccgatcgcc
     2761 caggcaccgc cggtaccccc gcgcgaggtg gccactgggc cgctgcagca gcaacagcag
     2821 cggcaggcgc cgacgccggc cgtgcgcgag cagccgaaag cacccgtgca gccacagggc
     2881 gatctgcctc cgcccaaagc accggaacca acgccctcgc cggagaccgc cgacgccaat
     2941 gtcgcgcaga ccagcgcacc gccgcaggtg gccgctgacg ccgccgcgcg ttataccgca
     3001 ccgcagacca ccgccggtga gcgcagtcgc gcggaggcga cctgggaagg acgcctgctt
     3061 gggcacctgc agaagcaccg ccgctatccg cgccaggccg agcgcctgcg ccagcagggc
     3121 gtggtctttg tgcgtttcgc ggtcgcccgc gacggtgcag tgtcgggcct gaagctgggc
     3181 cgcagcagcg gcttcgaact gctcgaccag gagacgctgg acaccgtgca gcgcgccagc
     3241 ccggtaccgg cgccgccggc cgaagtggcc ggcgacccgg tgcaggtgat ggtgccggtg
     3301 tcgttcttcc tgcgcggcag gtgaccggcc gttgcttgag gaagcggtcg gagccgtaga
     3361 gtcgagcttg ctcgactgct cttgcggtgc gggccaaaag cagtcgagca agctcgactc
     3421 tacgggtttg cgcatggcgt ggattacagc agcggcacca gcagcagcgc cacgatgttg
     3481 atgatcttga tcaacggatt gatcgctggg ccggcggtgt ccttgtaggg gtcgccgacg
     3541 gtatcgccgg tcaccgcggc cttgtgcgcc tcgctgccct tgccgccgaa gtgaccgtcc
     3601 tcgatgtact tcttggcgtt gtcccaggcg ccgccgccgg tggtcatcga gatggccacg
     3661 aacaggccgg tcacgatcgt gccgatcagc agcccgccca gcgcgcgtgg ccccagcagc
     3721 aggccgacca ccaccggtac cgccaccggc agcagcgacg gcacgatcat ttcgcggatg
     3781 gccgagcggg tcagcatgtc caccgccctg tcgtactgcg gcttgccggt gccctgcatg
     3841 atgccgggaa tctcgcggaa ctggcggcgc acttcttcca ccaccgcgcc ggcggcgcgg
     3901 ccgaccgctt ccatcgccat cgcgccgaac agatacggga tcaggccacc gatcagcagg
     3961 ccgatgatca ccgtgtggtc gctgagatcg aagcggaact cctgccccgg atgcgcagcc
     4021 tgcaggttgt gggtgtagtc ggcgaacagc accagtgcgg ccaacgccgc cgaaccgatg
     4081 gcgtagccct tggtcaccgc cttggtggta ttgcccactg catccagcgg atcggtgatg
     4141 tcgcggatct ccgaaggcag ctcggccatc tcggcgatgc caccggcgtt gtcggtgatc
     4201 gggccgtagg catccagggc cacgatcatg ccggccatcg acagcatcgc ggtggcagcg
     4261 atggcgatgc cgtacaggcc gcccagtgcg aacgcgcccc agatcgccgc gcacaccgcc
     4321 accaccggta gggcggtgga tttcatcgag atgccgaggc cggcgatgat gttggtgcca
     4381 tggccggtgg tcgaggcctg tgccacatgc tgcaccggct tgtactgggt gccggtgtag
     4441 tactcggtga tccacacgat caggccggtc agtaccagcc cgatcagcgc gcagccgtac
     4501 agcgccatcg gaccgtgcac gttgtcaccc atcagcccgg tggtaatcgg gtagaacgca
     4561 atcgcagcca gcacgccgga gacgatcacg cccttgtaca gcgcgcccat gatcgagccg
     4621 ccgggcttca ccttgacgaa cagcgcaccg atgatcgagg cgatgatcga cacgccgccc
     4681 agcaccagcg gatacagcac cgcgttggcg cccgcctcgg ccagcatcag gctgcccagc
     4741 agcatggtgg cgatgacagt gaccgcatag gtctcgaaca ggtcggcggc catgccggcg
     4801 cagtcgccga cgttgtcacc gacgttgtcg gcgatcaccg ccgggttacg cgggtcgtcc
     4861 tcggggatgc cggcttccac cttgccgacc agatcggcgc cgacgtcggc gcccttggtg
     4921 aagatgccgc cgcccaggcg cgcgaagatc gagatcagcg aggagccgaa ggcgaggccg
     4981 accagggcgt gcagcgcctg ttccatcggc aggcccatgc gcagcagcag tgcgtagtag
     5041 ccggccacgc ccagcaggcc cagcccgacc accagcatgc cggtgatcgc accgccacgg
     5101 aaggcgacgt ccatcgccgc gctgatgccg tggcgtgcgg cctcggcggt gcgcacgttg
     5161 gcgcgtaccg acacgttcat gccgatgtag cccgccgcgc cggacaggac cgcacccact
     5221 gcgaatccaa tggcggtgta ccagctgagg aagatgccga ccagcacgaa cagcaccacg
     5281 ccggcgatgc cgatcgtcag gtactggcgg ttgaggtagg cacgtgcgcc ttcctggatc
     5341 gcggtggcga tcgcgatcat gcgttcattg ccggtgggtt ggcgcaggat ccagcgcgcc
     5401 gagacgattc cgaacaggat cgcgagaatg gcgcagccca gcgccagtga cagcccgtga
     5461 cgttccagca ttagacccct ccgcaaaatg gatggacaag catccagtgg cgatgaacgg
     5521 caccacgagg gggacgacgg gctgcagcct ggaaccaacc cgtaccgacc ttggaggtcg
     5581 tccgacgtat ggcggtgttc agcattccct ggtgcccgca gtatgcgttc gacgcaccgt
     5641 agagtcgagc ttgctcgact gtcccctggc gcaaagcgcg atcacgccct ttgcaccccg
     5701 ttaagccatg ctctgcaagc ctgcgcacag tcccgaagga gatccccgat gcgcctgtcc
     5761 ctgttgatgc ttgccgccct ggtgcctgcc gccccggcat tcgctgcgga aaccccggag
     5821 ctgcagcgtg cggtgggtgc cccgcaggcg gtgggcgcag cgcatacact gcgccagatc
     5881 cccgaggcct gcgcgcggtt ggagggtgtg ttcaccggcg atgcggcaga gccgtaccgc
     5941 ttctccgccg tgcgtaccag cgagcagtgc cagccacgcg cgcgctttgt cgactatgcc
     6001 aaggcacagc cgagtaccga caagggctgg aagctcaacg atgtgatccg cgtgcccagc
     6061 gccgcgtgcc cggcgcagca ggcggtagtg cgggtgtggc gcctgccgtc gagcaacaag
     6121 gtcgagctgg atggacaggg ccagtcgcgc atctacctgg aagaggcgaa gaagcaggcc
     6181 gccgccggca agattccaca ggtgacgatg ttcgccgcgc agctgcagat ggaaggcaag
     6241 gcctgcaact gaggccgtcc ggcagcgcga atccacgcgt ggcgtgacgt gaggtagagc
     6301 cggccgctgg ccggcaaccg ggcatcaccc ggccaacgcc gctccccgcg ccaccagcag
     6361 ctcacgcagg gccttgcggt ggcagtgtgc ttcatcttcg cagtagcacc ctacgctgat
     6421 gtcgctgtgc tgcgacagcg cggccagcag gtccagcgcg tgggccgcat cgggtgcctt
     6481 catttcgacc ttgtagtggc ggaagaacgc attccagtcg gctgcgcttt gcgccgcgtg
     6541 cgcctgtttc accagttccg cactgggtga cagggtcggg aaccagacgt cgtaccagtc
     6601 ctggcgggcg aactcgctgc gcggcacgcc acgcggcggt cgccgcaccg tgccgatgcg
     6661 cagtccctca ccggcgacgc gtggcgtacc gagtcgaaca acgcgcagtg ccatggcaca
     6721 cctcgatgaa aaaggggacg gaggggatta agtcgcaacc gccccaacgc tgaccgggga
     6781 atgatgacgg aggggcggtt gcgacttaat cccctccgtc ccctttttcg gttcagccct
     6841 cgaagggcgg cagcttctgc ttcaccgcca ggttcttcag ggtgacgtac ttcggcaggc
     6901 cgtcggggcc gtagggcagt ggtgcttcgc ccttgatcag cggtgacagg taggcgcgtg
     6961 ccttggcggt gatgccgaag ccgtcgcggc ggatgaagcc ggccggcatc ttcttctcgt
     7021 ggttggcgat cttcgacagc ggtgcggctt cgatcttcca gcggtacggt gcgtcgctgc
     7081 tgcgcacgat caccggcatc acgccgttct ggcccttcag cgccaactgc accgcagcct
     7141 tgcccaccgc ctgcgcctgc tcccagtcgg tcttgctggc caggtgccgg gccgagcgct
     7201 gcaggtagtc cggcagggcc cagtgcacct tcaggcccag ctggtccttg acccgtccgg
     7261 ccaggtgcgc ggctacgccg cccagctgcg aatgcccgaa cgagtccttg ccgccgccgg
     7321 cgtcggcgac gaagcggcca tcggcagtgg cgatgccctc cgaggccacc accacgcagt
     7381 agccgacgcg ctcgaccacc gccttcacct tggccaggaa cagcgcctcg tcataggcgc
     7441 gttcgggcaa caggatgatg tgcggggctt cgtcatcgcc gttgccggcc aggcccgccg
     7501 ccgccgccag ccaaccggcg tggcgaccca tcgcttcgta gatgaagacg cgggtggaag
     7561 tctcggccat cgccgccacg tccagcgcgg cctcgcgcac cgagaccgcg gtgtacttgg
     7621 cggccgagcc gaagccgggg caggtgtcgg taaccgccag atcgttatcg atggtcttgg
     7681 gcacgccgat gcaggtcagg tcgtagcccg acgccttggc cagctgcgag accttcagcg
     7741 cggtatcggc cgagtcgttg ccgccgttgt agaggaacca gcgcacgtcg tgcgcgcgca
     7801 gcacctccag caggcggtcg taacgtgcac ggtcagcgtc cagtgatttc agcttgaccc
     7861 ggcacgaacc gaacgcgccg cccggggtgt gggccagcgc gcggatggcc gcggcgctct
     7921 ccttgctggt gtcgatcagc tcttcgcgca gggcgccgag gatgccgttg cgggcggcca
     7981 ggaccttgat gcccttggcc cgggcctgct cgatcaccgc tgcggccgtg gcgttgatga
     8041 ccgcggtgac accaccggac tgggcataga ggagagtacc gttgcgcatg cttctacctg
     8101 ctcgggggag gggacattgc agggacatta cccggatgcg gtaaagtggc gctattgcgg
     8161 tgcagcgata ccggaccgtc cgggacgcga accttctttg ttttcaacac gttggagtca
     8221 ggtcaatgcg attggttctg ttgggaccgc ccggttcggg caaggggaca caggcgacgc
     8281 gcctgaagga aaagctgggg atcgcccaca tttcgaccgg tgacatgctg cgcgcggaaa
     8341 tcgccgccgg caccgagctg ggcaagcagg ccaagacggt gatggatgcc ggcaacctgg
     8401 tgtcggacga catcctgctg ggcatgctgg aatcgcgcct gacccaggcc gatgtcgcca
     8461 agggcttcat cctggatggc tacccgcgca atgtggccca ggccaatgcg atggacggcc
     8521 tgctggccaa gatcggccag ccgctggacg cggtggtgca gctggacgtg gccaccgagc
     8581 tgctggtcga gcgcatcgcc ggtcgtgcca aggagcaggg ccgtgccgat gacacgccgg
     8641 aagcggtgcg ccagcgcctg caggtctaca acgaccagac cgccccggtg gtcgacttct
     8701 acgccggccg tggcaccctg gcccgcgtcg acggcgtcgg tgagctggac gagatcgaag
     8761 cgcgcatcct ggcggcgatc aaggcttgat ccggcgcggc cgggacactg ttccggcccc
     8821 tgggcgcgaa aaaacacagg cctggtccgc gaggatcagg cctgtgtcgt ttgataggcg
     8881 ccagcagagg gcttgctcag ggccccgcag catgagctcc cttggggatg gcctcttggg
     8941 gagtaggacc ggttcgggta ctgcggctgg cagttcgaat tgtgtccggg ttcacagaac
     9001 atcgctatcg ggaattccct gacagaagat tggagttttc tcacatcctg tgtaggactt
     9061 gtcttaccca ggcgcggaca ttggccctat acagccgtca tcagtcacaa tcctcggtca
     9121 tgagcagcgt acatatcctt gcaatcgccg gcaccttcat gggcggcgtg gccgccctgg
     9181 cgcgggaact gggccatccg gtcagcggca gcgaccaggc catctatccg ccgatgtcca
     9241 cccagctgga acagctgggc atcaccctgg accagggcta ccgcgccgac agcgtgccgg
     9301 ccggcaccga tgaggtggtg atcggcaacg cgttgtcgcg gggcaacgcg gccgtggagg
     9361 ccgtgcttga cgctggccag cgctacattt ccggcgcgca atggctgtcc gaacgggtgc
     9421 tgccggggcg tgacaccctg gccgtggccg gtacccatgg caagaccacc accaccacca
     9481 tcctcacctg gctgctggaa agcgccgggc gttcgccggg cttcctgatc ggcggcgtgg
     9541 ccgaggattt cggcgtctcc gcccggctcg gccagggccg cgagttcgtg gtcgaggccg
     9601 acgagtacga caccgcattc ttcgacaagc gcagcaagtt cgtgcactac cggccgctgg
     9661 tggccatcct caacaacctt gaatacgacc acgccgacat cttcccggac gtggcggcga
     9721 tccagcgcca gttccaccac ctggtgcgta cggtgccggc gcgtggccgc ctgatcgtca
     9781 acggcgaaga caagtacctg gccgaagtgc tggcgatggg ctgctggacc ccggtcgagc
     9841 gcttcggatt cgatccgtcg ctggagtggc atgccgagct gctggctgcc gatggcagcg
     9901 cgttccgcgt gcatcatcga ggccaggcgc tgggtgatgt gcagtggtcg ctgctgggcc
     9961 ggcacaatgt gctcaacggc ctggccgcgc tggcggccgc gcatgcggta ggcgtggcgc
    10021 ctgctgatgt gatcccggcg ctggcgcggt tccgcagcgt caagcgccgc atggaagtga
    10081 tcggcagcgt tgatggcatc accgtctacg acgacttcgc ccatcacccg acggcgatcg
    10141 ccaccacgct ggaaggcctg cgtgccaagg tcggcgatgc acgcatcgtg gtcgcgatgg
    10201 agccgcgcag caactcgatg cgactgggtg cacatgcaca ggcgctggcg ccgtcgctgg
    10261 cactggccga tgaagtggtg ttcctgcacc gcccggagct ggcctgggac gctgccgcgg
    10321 tgatcgccgc ggtacgcggc caagcgcacg cggtacccga taccgatgcc ctgctggcac
    10381 agctgcagtc ccatgcacgc agtggtgacc atgtggtgtt catgtccaac ggtggcttcg
    10441 acggcgcacc gcgccgcttc ctcgccgccc tgcaggcccg atgagcgccg acggttcgct
    10501 gccgctgttc ccgctgcaca gcacgctggt gccgggtgca gcggtgggcc tgcgcgtgtt
    10561 cgagcgacgc tatctggatc tggtccgcga cagcggccgc agtggcgagg gctttggcgt
    10621 ctgcctgatc ctcgacggcc aggaagtggg cgcaccggcg acgccggcgg catatggcgt
    10681 gcaggtccgc atcgaagatt tcgatgtcgg cgccgatggc gtgctgcagc tgcgcctgcg
    10741 tggcacccgc cgcttccatg tcgagcgcac gcgggtccgt gacaacggcc tggtggtggc
    10801 cgacgtgagt tggtgcgaag aagatcccga cgacgaactg cggccacagc atgcgctgct
    10861 ggccacagtg ctggggcaca tcatcgaaca ggcgggcgag gcgtatgcgc cggcgaatcc
    10921 ggcactgctg gatcaggcga gctgggtcgg ttggcgcctg gccgaactgc tgccgctgag
    10981 cgagcagcag cgcctgcagc tgctgcagat ggacgacccg catcagcgcc tgcagcagtt
    11041 gctgggctgg atgccgtagc cggcaaaggc caaccaaggt tggccactac cagagcgcgg
    11101 cgtaaccggt agatgccaac cttggttggc agcctttacc cgaagcgcca accaaggttg
    11161 gcgactacca gagcagcacc gcctccgtca gcgcgcggtg gtcttcaacc gcagtaccgg
    11221 caacccggtc tcgccgtgca cgtcctcgcg ctgcggcagg ccctgtacgg cctccttcac
    11281 cgcgttcatg gccgggtcga cgccgcgcag cggatgccac atgccgatcc attcgaagtg
    11341 gcgctcgtag cgcagggtct gtgcgctgcc cagccatagt ggcgtatcgc cgggctgcag
    11401 ctgggccggg gccggccaca ggcgcagtac gtagcgctca tccggctgcg caccctggcg
    11461 caccatcagc agcgcttcca cccgcgtttc cagcgtggcc ggcaataccg gcagttggtc
    11521 ggcgccggtg ttcttgtcca gcatcagcag ggcttcctgc cagccggcct gttcctgccg
    11581 cttccagccg cgggcttcca gctgcgcctg cagcggcgcc agcgggccgg ccacctgcac
    11641 gtccagcggc cagcgctggt catcgtcgaa ctcgttgcga cgcgccggca gcgtcgacca
    11701 gtcgtgctgc caccacgcct gcatgtccat cgcctgcggc gccggcaggg tcggttcaaa
    11761 gcgctccagc ttcaccggga tgtggcgcgg cgcgtaccac atcgccgcca gggcgaagac
    11821 gccgtagaac agccacgcca ccggtttcac ccagaacgag cggttgaagc gccgacggta
    11881 ggcgatgccc agcaccagca gccagaacgt gccgaacagc atgccgccga tcacatcgct
    11941 cagccagtgc gcgcccaggt acagccgcga gaagccgatc aggctgacca cgatgcccga
    12001 caccaggtac ggccagacgc gggtgcggcc gggcatctcg cgcgcgatca gcaccgcgaa
    12061 gaagccgaag gtgatggtgg ccatggtcac cgacaccgac gggaagccga agccgctgct
    12121 ggcatcgacc gggcgcacca catccacggt ggcgccgagc agcatggtca gcgccaggcc
    12181 gaaggccagt gcggccagcc agtgcgcggc ggccatccag cgtcggcgcc agatcaggta
    12241 gcccatcgcc gccgcggtgg ccggcagcag tacctgccag gcgcccagcg acgccagcgc
    12301 ggccatcggg tagtcggcca gcgggttgcg cagcgccagc atggcctggt gcaccagcag
    12361 gtcgatcgcc agcggttcgc catgcgcgac caccacggtc agcagcgcga accagcccca
    12421 gcccagcacc agcagcatca gcgccagcat cgccagcggt accgattcac gtcgtttcgg
    12481 gtcgagcacg ccgacggtgt agcggcccag cgtcgggtgg cggttggacc agtccagcag
    12541 gcgcgccagc cagttgtcca tgcgtgcggc cgaccagcgg tagccgtaca gcacgatggc
    12601 ccagaccagg ccgaggatca ccatcagcag gccgaccacc accaccaggc gtccggccac
    12661 ggcggccacc gcgtcatagg cttcgcccag aacccagccg ggggccagga acagcaccgc
    12721 ccaggaaatg ctggcgatgc cgctggcctg catgtagcgg ctggcaggca tcttcatcat
    12781 gccggcaatg gccggcacga acgggcggat cgcaccgacg tagcgtgcga tcaggatgct
    12841 cttgaacgca ttgcggcgga acaggttctc gccgcgatcg agcagctgcg gatagcggct
    12901 gaacggccag atgccgcgca ggcggtcacc ccagcgacgg ccgatccaat agctgatgcc
    12961 atcaccggcg aacgcgccca acgctgccgc cgccaccgcg tacggcccgg agatctggcc
    13021 caggccgatg aacacgccca ccgcgaacag cagcggcagg gccggcacga tggcgccgag
    13081 aatgatgacc gcatcgcaga aggcgatgag gaagataacg gcacccgcca gcacggggtg
    13141 agcggcaatc cacgcgaggg tggcgtcgat ccatgaagag tccattgccc gattataggg
    13201 gcgtgaaggt gactggttcc cagccgcttc gtgaccgttt gcaaccggcg ccatcgccta
    13261 gaatgggccc atgccgcata cgccagacgc tccaccgcat gccttgaagg ccgacagctt
    13321 cggccgcatc ctccttgtga aaggccccga tggcccgttc gtgcgccgcg atctgggcgc
    13381 cacgccgctg tggctgcggc tgcctgcgtg gtggctggca cgccgcgaag cacgcgcgct
    13441 gcagcacatc catggcatgc ctgacgtacc gcagttgctg gcctgggatg gccgccacct
    13501 cgaccgcagc ttcatggcgg gcgatgcgat gtaccagcgt ccaccccgcg gcgacgtggc
    13561 ctggttccat tcggcgcgac ggctgctgca gcacctgcat cggcgtggcg tggcccacaa
    13621 tgatctggcc aaggaagcca actggctggt caccgaggat ggccgtccag cgctgatcga
    13681 cttccagctg gcggtgatcg gcgatccgcg ttcgcgctgg atgcgcctgc tggcccgcga
    13741 ggacctgcgc cacctgctca agcacaagcg catgtattgc cgcgagtcgc tcactccggt
    13801 ggagaagcgc gtgctcaagc gcacttcgtg ggtgcgcgag ctgtggttcg ccaccggcaa
    13861 gccggtctac cgcttcgtca cccggcgcat cctgcactgg gaagacaacg aggggcaggg
    13921 gccgaagccg tgagggcatc gcaggtggtg accgccgcgc cgagtgcggg cagcgtgctg
    13981 cgcgcgcaga tggccggtgc ccactttgta catgcctgcc aggccagcac acagcgtggg
    14041 ggtcgaaccg cgttgcaggc ctaccgtgac atggcggcga gcattcccgg ctggttcgac
    14101 gggctgatgg cactgcgcaa tcgcggcatg cgcctgttgg gcatgaagga cctgggttcg
    14161 ctgcgcgctg tgcaggacat cgagcaaccg cgtccggggc agcggctcgg catcttcacg
    14221 ctgcagtcgc tggatgccga tgccatcgtg ctggaagaca acgaccgcca cctgcgcgtg
    14281 cagttggccc tgcagtggca gggcgatgtg ctggaagtgg cgacggtggt gcacacccac
    14341 aacgcgttcg ggcgcctgta catgctgccg gtagccccgg tgcaccggct gatcgtgccg
    14401 cacctgctgc agaagcaggt acgcgcgtat gggtaggtcc aggcaatgcg tggatgcgcc
    14461 gaagccgttg tagagtcgag ctcgctcgac tgaaacgcca gaatcagtcg agcaagctcg
    14521 actccacgaa ggtgagtgcc ggtgacctta cggcgccgcc ggcaccacct gctggccaat
    14581 gaagttgcgc ttggcgtcga agtcgtaggc gatctgcagc tggcccacat ccgggcaggc
    14641 gtggcagtcg cgcagcggtg tgcggtacag caggcggatg ccgccattct ccagcggcgt
    14701 cgctcccgcc gactgcgcgg gtgcgaacgg cgtcgcctgc gggttggcct tcagcagttc
    14761 ctgcaccgtc gggtccgcgc gcagggtgtc gtccagctgc acggcatcca catcgatgcg
    14821 cttgccactg gcgtcgacca ggcgggtgcc ttcgttggtg ttggcgcgga acgggtactc
    14881 caccgtggcc acgcccagcc cgtcactctc gtgccaggcg gtcacgtagg ccagttcgcc
    14941 gccggtggac aactgttcgg cggcggtgat cgcatcggcg ctggcgccac cggcgtgcat
    15001 cgcatcgcgc aggcagtcac gcgtggccgc attctcgccc tggcggcagg cgttgaggtc
    15061 gccatcccag accaccgcct cactccagcg catcctgcca tccgcagcgg ccttggccgc
    15121 gctgggcgcg tcaccggcgg acggctcctt gccgggttcc ggcgaacggc cctggcaggc
    15181 ggtcagcagg gcgagcccca aggcaggcag cagcaggcgg gaacggcgca tggcgtggac
    15241 ctcgtgcgtt gtctggaggc ccgagtatcg tcaaggccgg gtgaactccg cgtcggcgcg
    15301 gcatactagc ggctcattgc atacgctgga gtgtggaacg tgggcagtct gcagggcaaa
    15361 acgcttttca tcaccggtgg ctcgcgcggc atcggcctgg ccatcgcgtt gcgcgccgcg
    15421 cgtgacggcg ccaacgtggc gatcgccgcc aagtcgtcgg tgccgaatcc gaagttgccg
    15481 ggcaccatcc acagcgcggc cgaggcggtt acggcggccg gtggccaggg cctggccctg
    15541 aagtgcgaca tccgcgagga agagcaggtg caggcggccg tcgccgccac cgtcgacacc
    15601 ttcggtggca tcgacatcct ggtcaacaac gccagcgcga tctggctgcg cggcacgctg
    15661 gatacgccga tgaagcgctt cgacctgatg cagcaggtca attcgcgcgg cagcttcctg
    15721 tgcgcgcagg cctgcctgcc ttacctgctg caggcgccca acccgcatat cctcaccctg
    15781 gcaccgccgc ccagcctgga gccgaaatgg tggggcccgc acaccggcta tacgctggcg
    15841 aagatgggca tgagctttgt caccctcggc ctggccgcgg agttcggccc gcagggcgtg
    15901 gcggtcaatg cgctgtggcc gcgcacggtg attgccaccg atgcgatcaa catgattccg
    15961 ggcgtggatg ccgccggctg ccgcacgccg cagatcatgg ccgacgccgc gcatgccgtg
    16021 ctggtgcgcg aagcggcggg tttccacggc cggttcctga tcgatgatga ggtgctggcg
    16081 caggccggtg tcaccgatct gtcgggctat gcagtggatg cgtcgcggcc gttgctgccg
    16141 gacctgttcc tggattgagc ttgacccgct ggacgaggcc gagggctgcg accctcggcc
    16201 tgctgcgcta gaatgcgcag ctggaatcgt tttcaacaag gaagtgaacg catgtcacgc
    16261 actctttccc tcgcggcgct ggccgcgtcg ctgtcattga tcctgggcgc ctgcggtggc
    16321 aaggcgccgg caaccgcggg tgacgctggt ccttccggca agccggacgc cagtaccgca
    16381 agctccgacg cacagcagca gttgaccgca aaactcaacg cctacatcgg ctgcttcaac
    16441 gcgcttgatt cgaaaacaca cggcagcatc gagtcctaca cgcgctggat caaggacgtc
    16501 gacgccggcc cgagcgggcg cgagacgcag gtgtacgggc cgttcgagat cagcgactac
    16561 gacatgaagc agtgcgacgc gccggtgacc gaagcgatcg ctgccaagcc ggccctggcc
    16621 gatcttgatg ccgctgctgg ccggtatcag caggcgctga aggcactggt gccgctcagc
    16681 aaggacgcgc acgactacta cgatcgccag gactacgaat acgaccagtt tgccaagggc
    16741 aagcagatgc atgcgccttt gatggccgcc ttcaaggact tcgtggttgc cagcgaaacg
    16801 ttcaacaccg cgctggagcg ccacaacgac gctgcccagc gcgagcagct caaagcactg
    16861 gaacaggccg aggggcgcac gcgcgagtac taccgcctgg cgatgatgct ggaagcgaag
    16921 gcgatcgtgg agttgatgac cgatgacggc tttgatcagg ccgcagcccg cgaacacctg
    16981 gatgccttca accgcatttc cgatgaagcg cacgccaagg ttgccgacca gcagccgggc
    17041 aagacggact gggaaggctt cgagcgtgga gccgagaatt tccggcgcga aggcaaggag
    17101 cggctgcagc gtgtcagcga gaacaagccc tacaccgatt tcgagcggcg catgcttgat
    17161 tcgccctcga tggcgccgcg cggctctgcc agcaagctga tgcaggaata caacgcgctc
    17221 gttttccaga gcaatcgcca gtaaccgagg cgttcatcgc gccattttgt cgtaatcgaa
    17281 caggtcgatt gcgacgtgac ccatggcggg gcgccgaagg gcggcgtctt ccggcgctgc
    17341 cgggacgggt gtgggcgcga tgaaccacga tgactgcagt ttttacttgt gcaaggaact
    17401 gatttgaacg catccacacg tatgcttccg ttgcttctgc ttggctcgct ggcaggcctg
    17461 gccggctgca acaagccggc ggggttggcc gtggccgacc ccgggctggt aaaggtcaat
    17521 gcctacatcg agtgctacaa cggcgtcgaa cagcccgttc acgaaggttt ccaggcctac
    17581 accggctgga tgaaggatcc cgaggccggc ccgaccggca aggaagcgca accgcgctcg
    17641 cccggcaagg tgctgtcgca ccgggtcgag tattgcggcc agtcgatgac cgacgcactg
    17701 gcgaagaccc cggcactgcc gatggatggc cccgcgcgcg actatcagca ggcgttccag
    17761 gccctgaatg ccctgaccga gcgcgccgat ggctacttca cccgtgaaga ctaccgtcgt
    17821 gatgggggcg aaggcatgcg tgcacagcat gcgccgctga tgcaggccta tgccgccttc
    17881 ttcaaggcca gcgaagcgat ggatgtggcg ctggagaaga acgagaacga gcgccgcgcc
    17941 gcggagctga agcggatcga ggaaagcgag ggtcgctcgc tggcctacta ccacctgcgc
    18001 attctcggcg acggcaagca gctggccatg gcgttccagg gcgacgcgcc ggacctggcg
    18061 gtagtgcgca agcagctggc cgactatcag gcgctggtga ccgaagtgca gaacggcggt
    18121 gtcggcaagg acgacccgat gtggggccac gtgcagcgct cggccgacaa gctggtgcgt
    18181 accgcaggcc gcggcgtcga gcgcctggaa cagggaaagc cgatcagcgc cgaagcgctg
    18241 gcggccgagc gcaaggcctc gggcagctgg ctcaccaccg atcctgaagg cgcgcagtcg
    18301 acgatcctgg acgcctacaa cgacctggtg accaccagca accgcctgcg ctgagcggtg
    18361 ccgcgcggcc acgcagcgcg tggatccgcc aagggcagcg ccgggtcatc cccggcgcgc
    18421 gccctcaatg gctgaacgca tccggcagtt caccgccgca cctgcggcag tggcgggcgt
    18481 ccggctcgtg gccttccagc ccgcagtgcg ggcagccgcg ggcatcgcgg cgtgcggcca
    18541 gctcggcttc gcgcatggtg ctggccagtt cggcggtgta gatgccggtg ggcacggcga
    18601 tgatgctgta gccgatcagg atcagtaccg aggtgacgaa gcggccgagt acggtctgcg
    18661 gcacgatgtc gccgaaaccg accgtggcca tggtcaccac cgcccagtac atgctggccg
    18721 gaatgttgct gaagccatgt tccggccctt cgatcacgta catcagcgcg ccagcgatga
    18781 tggtgatggt gatcaccgtg aacaggaaca ccagcacctt gcgccggctg cgccacagcg
    18841 acgtcatcag cacgccgctt tcctcgatgt agcgggtcag cttgaggatg cggaacacgc
    18901 gcaggatgcg cagcgcgcgc accaccagca ggctctgcgc gccggggatg aacaacgaca
    18961 ggtaggcggg caggatcgac agcaggtcga tgatgcccca gatgctcacg gcgtaacgca
    19021 gcgggcgctt gaccaccgcc aggcgaagca ggtactcggc ggtgaagatg atggtgaagc
    19081 cccattccag gatgtacagg ccggtggacc attcggcatg caggtgctgc acgctgtcga
    19141 tcatcaccac caggatgctg gcgatgatcg ccaccaccag gatcaggtcg aaattgcgcg
    19201 aaggccgcga gtcgtggcgg tagatgatgt cgaaccaccg acggcgccag ccggtctcgg
    19261 tggcggggtt cagctggggg gcggaaaacg gtcgcatggg cgcattgtgc cgcaggggtt
    19321 ccggcgcgag aatggggatt cctgaatcct gccgactgcc atgaccgccg ctaccgatcc
    19381 gctgatctcc ctttcgcact actacctgcc ggtctacaag ccccgccagg tggtactgga
    19441 gcgaggccag ggcgcccgcg tgtgggacag ccagggccgt gagttcatcg acctggccgc
    19501 cggcatcgcc gtgtgtggcc tgggccataa cgacccggac ctggtggccg cgctggtcga
    19561 gcaggccggc aagctctggc acaccagcaa cgtgttctac agcgcgccgc cgctgcacct
    19621 ggccgaagag ctggtgaagg ccagccgctt cgccgagcgc gtgttcctgt gcaattccgg
    19681 cgccgaagcc aacgaagtgg cgatcaagat ggtccgcaag tgggcctcca gccagggccg
    19741 cccggccgac aagcgggtga tcatcacctt ccgtggcagc ttccacggcc gcaccctggg
    19801 cgcggtgacc gccactgccc agccgaagta ccaggaaggc tacgagccgc tgcccggtgg
    19861 cttccgctac atcgatttca acgatgaagt gcagctggaa accgcaatgg ccgccggcga
    19921 cgtggcagcg gtgatgctgg agccgatcca gggcgagggc ggcgtgatgc cggccaagtc
    19981 cggtttcctc aagcgcgtgc gcgaactgtg cgaccagcac gacgcgctgc tggtgctgga
    20041 cgagatccag gccggcatgg gccgcaccgg cacgctgttc gcgcactggc aggacgatgt
    20101 ggtgccggac atggtcaccc tggccaaggc actcggcggt ggcttcccga tcggtgcgat
    20161 gctggccggc ccgaaggtgg ccgaaaccat gcagttcggc gcgcatggca ccaccttcgg
    20221 tggcaacccg ctggctgctg cagtggcccg cgtggccctg cgcaagctgg cctcggcgga
    20281 gatcgccacc aacgtcagcc gccaatcgaa ggcgctgcgc gatggtttcg cccgcatcaa
    20341 tgacgagttt ggcgtgttca gcgacgtgcg tggccgtggc ctgatgctcg gtgcggtgct
    20401 gagcaaggac tttgccggcc aggccggtgc catcctcgac catgccgccg agcagggcct
    20461 gctgaccctg caggccggcc cggacgtgct gcgcttcgtg ccgtcgctga acatcaccga
    20521 cgaagaagtg gccgaaggcc tgaagcgcct gcgcgcagcg attgccgcgt tcatcgccgc
    20581 gcgctgatcc ttggcggtag agccgggccg atgctcggct ctacaggatt gcgtagcgct
    20641 tcaacacctt ccccaacccg cggccgtcgc gcaccgtttc ggcgtgcagg ccggccgcgc
    20701 gcgcgccgcg cacgttggcg aaaagatcat cgatgaacaa ggtgcgcgca ggcgcaacct
    20761 gcagtacctc gagcacgcgc tggaacaccc ttggctgcgg tttgcgcagg ccgaaatcgg
    20821 cactgcagaa cacgcggtcc tgcagcgccg gaaacaggtc cggcagcagg gcgggcaatg
    20881 cctgcaccat cagcgcgccg ttgttggtca gtaccgccat tggtagttgc agcgcctgca
    20941 gccgctgcag cacggccacc tgcgggtggc tggcggcctg ccgtgcagcc acccaggcgg
    21001 ccacatcgag cgtcctgccc agaagcccgc caagctgcgc cagataggtt gggccatcca
    21061 gtgcgccacg gtcatgcgcg gcgtccagcc cgctgtcgta cagcgcggcc tgcacggcct
    21121 gcggggaaac gtccagcgcc tgcgccaggt gcagcacgcg ctgcgcgcgc tggtactgca
    21181 ccagcacgcc atccacatcc agcagcaaca ggtcgatccg catcggccga gcatgccatt
    21241 gccatggatg cgcgcaagcc ctggagcgtg catgcgacag acggtcgcag acgggagcgc
    21301 atgggcctgc ctagaatggc gcttgaatcc gcaggagatg cagcgatgaa ggcttggacg
    21361 gtggcagtgg gactgggtgc gctgatgctg gcgccatcag cgatggcgcg ggtctgtgcg
    21421 gtgagcatcg acagcaccga ccagatgagc ttcagcagcc gcgagatcaa gattgccgcc
    21481 gactgcagtg ccgtggacct gaccctgcgc cacaccggca agctggccgc caccgcgatg
    21541 gggcacaact gggtgctgac ccgcacggcc gactaccagc cggtggcgat ggcgggcatg
    21601 cgcatgaccc tggccgacag ttacctgccg aaggccgaca agcgcgtgct ggcgcacacc
    21661 aaggtgatcg gcggcggcga gaccacgcgc gtgcgcttct ctacccaggc cctgcagaaa
    21721 ggtggcgatt acaccttctt ctgctcgttc cccggccact tcgcgatgat gaagggcaag
    21781 ttcatcttcg gttgatgccg tctgtagagt cgagccatgc tcgactgctc tgtgccaacc
    21841 aaggttggca cctaccagat gcggcagtgc caaccaaggt tggcacctac cggggcagca
    21901 ctcagccctt ggcggccttg aatgccacgc gtgcagcggc gagggtggcc tcgatcacgg
    21961 catcgtcgtg ggcgctggac aggaatccgg cctcgtaggc ggacggtgcc aggaacacgc
    22021 cctggtccag catcgcgtgg aagaagcggt tgaacgccgg gatgtcacag gcagtggcct
    22081 gcgcataggt ctccaccttc tcactggtga agaacaggcc gaacatcgcg cccacgcggg
    22141 tcgtggtcac ggccacgccg gcttcggcgg cggcggcttc caggccggta cacaggcgcg
    22201 cggtgcgctc ggccaggtcg gcgtggaaac ccggctgctg gaccagttcc agcatcgcca
    22261 ggccggcggc cattgccacc gggttgccgc tcagcgtgcc cgcctggtag atcgggccag
    22321 ccggggcgat ctgctgcatc agctcaccac ggccgccata ggcaccgacc ggcatgccgc
    22381 cgccgatgat cttgccgaag gtggtcaggt ccggggtgat gccgtagtgc gcctgcgcac
    22441 cgccgagggc gacgcggaag ccggtcatca cctcgtcgaa gatcagcagg gcaccatgct
    22501 tcgtgcacag ctcgcgcagg tgctgcaggt agccctcgcg cggcggaatg cagttggcgt
    22561 tgccgaccac cggttcgatg atcaggccgg cgatgtcgtc accctgctgt tcgaacagtg
    22621 cggtggcggc ttcgaagtcg ttgtagggca gggtcagggt cagctcgctc agcccggccg
    22681 gaacacccgg tgaggtcggc acgcccaggg tcagcatgcc gctgccggcc ttgaccagga
    22741 acgagtcgcc gtggccgtgg tagcagcctt cgaacttgac gatgcggttg cggccggtgg
    22801 cgccgcgcgc caggcggatc gccgacagcg tggcttcggt gccggagttg accatgcgca
    22861 ccatctcgca cgacggcacc aggcgggtga tggtctcggc catggtcact tcggccgcgc
    22921 acggtgcgcc gaacgagagg ccgttgtcga tggccttctt caccgcctgg cgcaccgccg
    22981 ggtggttgtg gccgacgatc atcgggcccc aggaaccgac gtagtcgatg tagcggttgc
    23041 cgtcgacgtc gtacaggtag gcgccgtcgg cgcgctcgac gaagaacggc tcgccgccga
    23101 ccgacttgaa cgcgcgcacc ggcgaattga cgccgcccgg cagcagctgc tgggcgcggg
    23161 agaacagggc gtgggactgg tcgtggttca tggggctttc ctgggtgtta cgcgaactgg
    23221 gcgaggaggg cgtgctgggt cgcgaccggg tcttcggcgg cgaacacgct gctgaccacg
    23281 gcgaccagat cggcgccggc gtcgatgatg ggaccgacat tgtccggggt cagcccgccg
    23341 atcgccaccc gcggcacgcc cagtgcggcg ctttgccgca gcaggtcggg gtgggcgcgg
    23401 ctgctggtga tcttggtggt ggtggggaag aaggcgccaa aggccacata gctggcgccg
    23461 gcggccacgg ccttttctgc attggccagc tggtcgtagc aggacgcgcc gatgatggcc
    23521 tcggccccca gcagcgcacg cgcgctgggg atgtcgccgt cggtgccgcc cagatgcacg
    23581 ccggccgcgc cgaccgcctt ggccagcagc gggtcgtcat tgatgatcag cggtacgcca
    23641 tgggcagcgc acaggccctg cagggcagtg gcctgctcct gccgcagggc gtcactggcg
    23701 gtcttgttgc ggtactgcag ccaggtggcg ccggcggcca gcagcggcgc ggtgcgtacc
    23761 agcaggcgtg cggtatcggg ttcatccggg gtgatcaggt agacgccgcg gggcgccggg
    23821 gaagctgaag tcatcgatgg ctaccggtga gtggaccgca atgggacaat ggcggcccgt
    23881 gaatccagcc ctgattatcc gatgagcgat gccaccccca ccaccttgcg tacctggatg
    23941 tgcgtggtct gcggcttcct gtacagcgaa gcggacggct tgccggagga gggcatcgcg
    24001 ccgggcacgc gctgggagga cattcccgag acctggacct gcccggactg cggggtgacc
    24061 aaggccgatt tcgagatggt cgaggtcgat tgaccggacc ttgcagtggg tgtggaccgt
    24121 t
//
LOCUS       DAOKIP010000043        24034 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.043,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000043 DAOKIP010000000
VERSION     DAOKIP010000043.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 24034)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24034)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24034
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.043"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(36..503)
                     /locus_tag="QEL58_001498"
     CDS             complement(36..503)
                     /locus_tag="QEL58_001498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019237451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SET domain-containing protein-lysine
                     N-methyltransferase"
                     /protein_id="HDS1675978.1"
                     /translation="MPKKIQARKSAIHGNGVFAVAPIKQGERVIQYKGLLRSHGDVDA
                     DDSGDVESGHTFLFTLNDDWVIDANYKGNDARWINHSCDPNCEAVIEEDEDGDSRGDK
                     VFIEALRDIKAGEELTYNYGITLAERHTAKLKKIWECRCGSPKCTGTMLQPKR"
     gene            714..1169
                     /locus_tag="QEL58_001499"
     CDS             714..1169
                     /locus_tag="QEL58_001499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005412530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SUF system Fe-S cluster assembly regulator"
                     /protein_id="HDS1675979.1"
                     /translation="MLRVTKLTDYATVVLTVLAARPGEVLSATELAEFTGLEPPTVSK
                     VLKPLAQAGLVEGLRGVRGGYRLTRPALEISLFEVVEAMEGPLALTECSHDHHQCGMA
                     PKCGARSSWRLINDVVSEALRDVTLAQILPPLPLADDEQRRTIAVDVVS"
     gene            1187..2662
                     /gene="sufB"
                     /locus_tag="QEL58_001500"
     CDS             1187..2662
                     /gene="sufB"
                     /locus_tag="QEL58_001500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014403413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein SufB"
                     /protein_id="HDS1675980.1"
                     /translation="MATETIENVAHDDTPNREIHEQLGRKYSAGFITEIESDSLPPGL
                     DEDTIRALSAKKEEPEWMTQWRLDAYRHFLTMPMPDWAKLEIAPIDLQALSYYSAPKG
                     PKYASLDDVPKELLDTYDKLGVPLHERAKLAGVAVDAVFDSVSVGTTFRKELAEKGII
                     FCSMSEAIKEHPELVRQYLGTVVPVGDNYFAALNSAVFSDGSFVFIPKGVRCPMELST
                     YFRINAGHTGQFERTLIVCEDKAYVSYLEGCTAPMRDENQLHAAVVELVALEDAEIKY
                     STVQNWYPGDENGVGGIYNFVTKRAECRGARSKVTWTQVETGSAITWKYPSCVLLGDD
                     SVGEFHSVALTHHRQQADTGTKMIHVGKRTKSKIVSKGISAGRGQNTYRGLVKVDRNA
                     DGARNYTQCDSLLIGKQCGAHTFPYIEVKNPGATVEHEATTSKISDDQLFYCRARGIS
                     QEDAVSMIVDGFCKQVFRELPMEFAVEAKKLLEVSLEGSVG"
     gene            2735..3499
                     /gene="sufC"
                     /locus_tag="QEL58_001501"
     CDS             2735..3499
                     /gene="sufC"
                     /locus_tag="QEL58_001501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014646270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly ATPase SufC"
                     /protein_id="HDS1675981.1"
                     /translation="MLKIENLHARIGDKEILKGLSLEVKPGQVHAIMGPNGAGKSTLG
                     NVLAGRDGYEVTEGSVQFEGTDLLDQDPEARAAAGLFLAFQYPVEIPGVNNTYFLRAA
                     LNAQRKARGEEELDSMQFLKLVRQKLAVLHLKDELLHRGVNEGFSGGEKKRNEIFQLA
                     VLEPKLAILDETDSGLDIDALKSVADGVNALRAADRSFLVITHYQRLLDYIKPDVVHV
                     LADGRIVKSGGPELALELEAHGYDFLKDRVVREAAV"
     gene            3499..4761
                     /gene="sufD"
                     /locus_tag="QEL58_001502"
     CDS             3499..4761
                     /gene="sufD"
                     /locus_tag="QEL58_001502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014090672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein SufD"
                     /protein_id="HDS1675982.1"
                     /translation="MSALLDSMAQAFCGSDARREVLDAALRDGLPAARNEAWKYTSLR
                     QLERRAFAAAPLQGPALDATLLEDIPAPRLVFVNGRLDAALSDVQALPAGVQLQPLSA
                     ALADGEDAVRFLGRRYERSEEIFARLNAALADEGVVLRVDEGVQVDVPLQLVFASVAG
                     DTDLAWHHRHLIELRAGASLGVVEHRFSVGDSAHLDNTVLHAHVARDAVLKHARVQAG
                     SARQTSFLRTDAVLARDAQYHRVDLELGAALSRHELNVRLEGDNAQLTANGVLLGNGR
                     RHVETRLGIDHIARDTTCELLWRGVAANRSRVVFHGGIQIREGADGTDANLSNKNLLL
                     SADAEIDTQPTLVIDADEVKAAHGATVGQLDANALFYLRSRGLPQAQAQALLSAAFCH
                     EPLKILPEALREQLARRLDKALVEAGVA"
     gene            4758..6014
                     /locus_tag="QEL58_001503"
     CDS             4758..6014
                     /locus_tag="QEL58_001503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010483557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase"
                     /protein_id="HDS1675983.1"
                     /translation="MNLSTPRPIEERTGAPDWDRVRLDFPLLMREVHGKPLVYFDNAN
                     TGQKPVQVIGAVDEFYRRYNANVSRAVHALGSEATDAYEGARNKLARFLNVRPSDLVL
                     CSGTTFAINLVAYSWALPRLKAGDVILVSRMEHHANIVPWQLVAQRTGATIRVAEITP
                     DGALDLDALRAAMTPEVKLLAVTHVSNVLGTVNPVREICREARKRGIITVVDGSQAVP
                     HRKVDVAAIGCDFYAITGHKMCGPTGTGALWARREHLDAMPPFLGGGEMIKEVSFDGT
                     VFNDAPHKFEAGTPNIAGFIGLGVAADYLQQLGQENVEAREAELLAHFTEELRRVDGL
                     RIIGEAPEKAAVVSFLIDGAHAHDLATLLDLEGVAVRSGQHCAHPLLQYFGVAATCRA
                     SLAFYNTHAEIERFMTALTKVRKLLG"
     gene            complement(6332..6607)
                     /locus_tag="QEL58_001504"
     CDS             complement(6332..6607)
                     /locus_tag="QEL58_001504"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675984.1"
                     /translation="MSAADEVKSAAACLRMLLESEPASAEQVSAWYTRAEALKRTLQS
                     SVCGIDVPHLIWHYLDDADIRFRDGSYAQDQILAVEKIVEEWGGGVS"
     gene            complement(7088..7387)
                     /locus_tag="QEL58_001505"
     CDS             complement(7088..7387)
                     /locus_tag="QEL58_001505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019337097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675985.1"
                     /translation="MTGIIESYPVCSSVILGGMWINGFAAHRMLLKMERKRPEVLEAV
                     GIIRVDWWFRCLRGIGLLALSGKGLMITRGERWVLRGVVATYVFLVACGISMLVG"
     gene            complement(7428..7802)
                     /locus_tag="QEL58_001506"
     CDS             complement(7428..7802)
                     /locus_tag="QEL58_001506"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675986.1"
                     /translation="MPLQMTFAVVVQRRSMGNHRVINWLFLFSIVGILIFYPAHFYFC
                     TEFKMRLRRDHPELSGRGLASFDTTYRQLRAVREGRLDGVLLSKDVCDSHRLASRFLH
                     LGMISFMILLVVGLCDSVWGGN"
     gene            complement(8537..9004)
                     /locus_tag="QEL58_001507"
     CDS             complement(8537..9004)
                     /locus_tag="QEL58_001507"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675987.1"
                     /translation="MRVPLFFVVLSVLLAACGSEGLQGEGEPRLGRAGEAPSLVLSEK
                     ELQNQISMAEGGDAEARLKLEWHYSTRGDMERYRYWLEEGAARMDVSAMQRLALFLSM
                     EQGGGDCKRAMQILEQGLRLDPPESTRALMEMDLQRLRHERIGIPPCGVGFPD"
     gene            complement(9001..9960)
                     /locus_tag="QEL58_001508"
     CDS             complement(9001..9960)
                     /locus_tag="QEL58_001508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015472236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RHS domain-containing protein"
                     /protein_id="HDS1675988.1"
                     /translation="MNGLSLLLNRAVLALVVLAACVAPAAAQEVVEYIHTDALGSPVA
                     ITDANGQVIERTVYEPYGAVVNRPLTDGPGYTGHVTDSETGLSYMQQRYYDFETSTFL
                     GADPVAADSDGTSFNRYRYASANPYKFKDPDGRADMNVFGEADPNGLRAAGDALNIPG
                     KFTVAGHANNTVIQDQRGGRMENYSVVSSWDMARTQFGLKQGQEILMAGCHLGAEIGK
                     ARAFAQGWANLNKSSVYAPNGFVRYPKNYKPGDDMTLRVSLGENGTGGAGVWQKFSPG
                     GAGPTGPAIRSITIKADGAISYQFAEPELGSRIRRIETVKVKQ"
     gene            complement(9964..15294)
                     /locus_tag="QEL58_001509"
     CDS             complement(9964..15294)
                     /locus_tag="QEL58_001509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008264919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="wall-associated protein"
                     /protein_id="HDS1675989.1"
                     /translation="MRFRITLRSRHAGPIRSSLLLMVTALSLAPALASAQIVPTWRQE
                     YDKRLKYGDLVEPLKGDIFGEKVNLYDGSVSFSATDISIPGNGGLAVSLGRSYGDIGG
                     SANDNEYGNWTLDIPSLSGTYGDQPETAVAGHWTPSARCSTVSAPPALDVWNYKHTQT
                     TVFAPHTYWEGVRLSLPGGSGETVLAGSGDTRQPIPQLGMPAPWNTKGGWFFSCLSSL
                     KSGQPGEGFLGHAPDGTKYYFDWMVARHNDPAVMQPYDTITHSTLQRKKVFLYPSQVV
                     DRFGNWVRYEWSGGRLDRIIASDGRSISLTYDSQGRIATAQAGGRTWTYGYTPAGTLQ
                     SVTLPDGTAWSYDLPPVNVTKKYQEYTGQDVWTYMEVPALCAKTNKIVQTEVAASITH
                     PSGAVGTFVFRPFRHGRKNVPFNCQTSGDDQLLADGWNLTPIYRDAMSLVAKRISGPG
                     MPAAQWSYQYTNLGWEYDRRVDQAGWPAIPVGQAEPKITIETLPDGVIRTYEFGKEVG
                     YNDGLLLSTSTSAGGTVVRTERNNYYPDAQIANAPFPREAGRNLKYGATELGEHLNRP
                     VQSTVVNQDGVQFIRTVQAFDAFVREVTVDEGNSAGQSRTRTTGYYDNAALWVNGQVA
                     RSLLNGIEESRTEFDPANALPLRAYAFGRLAQQVTYAADGTVASVADGRGNTSHLSGW
                     KRGIPQQLRMPATPEAPNGAVRTVAVDDNGWIASLTDEVGATTSFSYDSMGRLRSQQF
                     PGGDEVNWNGVTMDLQRLGGAQLGVPAGAWKHSRTQGGRRTDTYLDAMFRPLLVTENA
                     NNALDSAVVTRYDSSGKTVFASYPTRQLTDINAAMTGTTTQYDALGRPVVVSQSSELG
                     DLATRTEYVGNLSVKVTNPRGQATTTRHLAYDQPSYEMPLTLQHPEGVVTEIQRDTLG
                     KPLAITRRTADGSQALTRRYVYDGYQQLCKTIEPETGATVQDYDAAGNVLWSAAGTGL
                     NSAADCNRSEAFASGRVVARSYDAANRLSTLTFPDGRGNQRWSYTPDALPAEISTQND
                     PARPMVVNRYQYNRRRLLSSETLQHPDLGNLSLAYGYDANGTLASNTYPGGRVVSYAP
                     DALGRATAVGGYANSASYFANGALARFVYGNGIAHTLTQNARGLPERSRDATAAAAVL
                     DDSYDYDAGGNVMAISDGLPGAPGNRDMTYDGLDRLRTVTAPGFGNALYEYDALDNLR
                     RARVGSRDRTHYFDPSNRLVNVIETGTGATVTGLGYDVQGNLSVRNGQAFSFDYGNRL
                     RDAGAAESYEYDAHGRRVKASAGGKGAIYSFYDKGGVLRFQRNERTGKQTDYLYLSGS
                     LVAQVHGAAAPAAPALSAPGYITEGSVNLTWSPAGGANRYELQRALAGAWSIVFDGAA
                     QSFTSTGLATGTYQFRVRGCRAVCGEWSNVASVAVALAPSTVPALSVPATAFNGSYGV
                     SWSVASGAERYELEESANGGAWTQVHNAAGQSRDFSGKGAGSYGYRVRACNPVGCTAY
                     SASAAVTVVYPPEGAPGISAPARSAPGSIGIGWNGVAGATRYTLQESSNGGGWVTLFD
                     GDAGSYATAARGVGNYGYRVAACNGAGCGPWSGTASVAVIGPPAIEPVISAPGLVNVP
                     QYSLSWSVPANSESFVLEESANGGGWTVVHNGAANSFGASRGKGSYAYRVRACNFVGC
                     SPYSGVVTVAVVLPPGATSLYLAEWLTTRRPPYQVQCSAGWSPVADATEYQLESGGGG
                     QRLYTGPSTYVNDSGGTYCAHEYRVRACNAGGCSPWSAERPVTRGVLSWD"
     gene            15518..16057
                     /locus_tag="QEL58_001510"
     CDS             15518..16057
                     /locus_tag="QEL58_001510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014646266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDS1675990.1"
                     /translation="MTTLTYRAATPADIPALIALVTSAYRGDASRAGWTTEADLLDGA
                     RIDAEGIQADLDRPRSTILLAEREGRLVACAHVADVDGKGYFGMFSVDPAQQGGGVGK
                     QMMDAAEAHAAREWNVPVMQMTVIDVRDELIAFYERRGYQRTGIKKPFPYGDERFGIP
                     KRDDLRFEILEKPLAGATA"
     gene            16054..16386
                     /locus_tag="QEL58_001511"
     CDS             16054..16386
                     /locus_tag="QEL58_001511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005412525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="non-heme iron oxygenase ferredoxin subunit"
                     /protein_id="HDS1675991.1"
                     /translation="MSEAWTFVCAGAELLPGEMKSVFDEVTGTPIVVFNLDGDLYALE
                     DQCTHEEFELSSGEFNTTEGSVECVLHGARFDVRDGRALCAPAYTPVPKFPVKREHDA
                     IWTRDDRD"
     gene            16558..16959
                     /locus_tag="QEL58_001512"
     CDS             16558..16959
                     /locus_tag="QEL58_001512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019336502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675992.1"
                     /translation="MASPAPAATLCQLARQGWPLLVAALLTLVLGWSALHEGRDGPAT
                     YGWQAHAEELHQAMPMPAPPADECPQHAVPAPEPPLDGEGGTPCAGLAPARAALVAHI
                     PLWRSDALRWQLHDPALRLNPGHAPPVPHAS"
     gene            17116..19404
                     /locus_tag="QEL58_001513"
     CDS             17116..19404
                     /locus_tag="QEL58_001513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent siderophore receptor"
                     /protein_id="HDS1675993.1"
                     /translation="MTHIKTRKYAPRVSLLASATLAAGFAPLAAQAADSAASGNNKAT
                     DLDKVQVRGSWFNPSSPKFTAELLDTPKSVSIVSQKLIAETGATNLQDALRMVPGITF
                     GAGEGGNPTGDRPFIRGFDSQSNIFVDGLRDVGSQTREIFDLEQVEVVKGPSSAYGGR
                     DSGGGSLNLVSKTPKLKNETSASMGIGTDSYARGTVDANYVLGDGIAARLNLMKHESD
                     IAGRDAANVSRWGIAPSIAFGLNGPAQLIASHYHMQSDDLPDAGGFPYGNPNGAPASK
                     WVDGRPMVPDRNNYYGLVDRDFQRTRADISTLDASYDFGGHKLRNIARLGNTSNDYLW
                     TQPDDSQGNPNNYGTLWRRTNTRAVDVKSFADQLGLTGAFQTGALKHSYSAGVEYSDE
                     KMTRGSYLIAPGTSNPLTGNSKCPTTGAATGYNCTDFANPNPRDPWAATHSVYRSDKA
                     LDVEQRTKTKSAYLFDTIELNAQWSFNVGLRYDDYSTTLTTPVAGAAPTRVRNDNDFL
                     NYQAGVVFKPAANGSIYLSYGTSSTPPGMDGGDGSDGLNAGVADLKPQDTKNLELGTK
                     WDLLDNRLNLTAAIFHTVMNNARVTVDNGTSQNAGKKEINGFELGFNGQLTDAWSLYG
                     GYTYLDSELKDNGFVCAVSGRTCPSNIYVPSPNNGNVFPNTAKHSANLWTTYRFPIGL
                     TVGAGAFYSDKQYGDVANTKWIPSYTRFDAMASYAIQDNISLQLNVQNLTDKAYFTKA
                     YASHYASIAPGRSATLALNVKF"
     gene            19473..20192
                     /locus_tag="QEL58_001514"
     CDS             19473..20192
                     /locus_tag="QEL58_001514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sel1 repeat family protein"
                     /protein_id="HDS1675994.1"
                     /translation="MATRTPIDSDALAELLQHDSQAAFARVRDAAQAGQVDAQLLLAQ
                     MHMEGKGTAQDPSAALLWYETAANNGVPMAMNMLGRCHELGQGTAADPTLAAVWYRRA
                     ADTGLDWGLYNLANLLATGRGVAQDRAQALALYTRAAHLGHAKSMNLLARHLEDGLEI
                     ERDPQAALGWYRRAAETGDFRGQANYASILLQAGQIDQAVHWLKQALALGSPAFMAHI
                     VPELAASPHPQVRALVAPPSP"
     gene            20203..20880
                     /locus_tag="QEL58_001515"
     CDS             20203..20880
                     /locus_tag="QEL58_001515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012479362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe2+-dependent dioxygenase"
                     /protein_id="HDS1675995.1"
                     /translation="MLLHIPDILSAEQVADVRRRLDAADWTDGRETVGHLGAQAKHNQ
                     QLPEASPLRRELGEIILVALARHPLFFSAALPLKYLPPRFNRYSGGGTYGFHVDGAVM
                     NLANGEQLRSDISCTLFLSAPEEYEGGELIISDTYGEHEVKLPAGDLIVYPSSSLHKV
                     NPVTRGARVASFFWVQSMVRDDVQRRLLWEMDGSIERLRQTGGDAEAVLQLTGVYHNL
                     LRRWSEV"
     gene            21046..21447
                     /locus_tag="QEL58_001516"
     CDS             21046..21447
                     /locus_tag="QEL58_001516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1675996.1"
                     /translation="MGTAMRGQRPALASLLAWVAMLALLLGTLPLLPHATAPMTVQVP
                     LEERGGEGPLQEEAPAKLRRCAAAPVKAAEKSPPPLLLASQWLRTELELVPATPAMPG
                     VRPDWPLAAPDTPWADAPGRRQQRGQAPPLA"
     gene            21608..24028
                     /locus_tag="QEL58_001517"
     CDS             21608..24028
                     /locus_tag="QEL58_001517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005415587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDS1675997.1"
                     /translation="MAQRHRVRSSLSRPLLTSAVLVALSAPAFAHGDASGAPQTLDKV
                     VVTASGFEQKVIDAPASISVVSREELSKRPYTNLVDALRDVEGIDVGLEATDKNGRAT
                     ISMRGLPSEYTLVLIDGRRQSNVGQLYPNNFGGGQFAYLPPLDAIERIEVVRGPMSTL
                     YGSDAMGGVINIITRRNQDSWHGALTQGFTVQQDDQFGDARTTDLYLSGPLLKDRLSL
                     AVRGSYYDAKASNPEWEALTLPDGTLWERSIGFGGGGKSVANTNWNTGVRLDFRVNDD
                     HELWLDYDVSRQKYDNSEGQTGTLDSLASLWRVGNAVIPNPNGSGTITRRVVQPRVGY
                     TAYQRYERDQLSLTHQGRYSFGTWQTSLTHSKSSNLGRSLPLTLDERANLQTLWNDVC
                     RRTGAANNCAAGRGNALTALNPSEMARLQAFLPRPLRTMELEGYVLDTMLDLDFGSHK
                     LTVGGQYNDTDMIDGVFGMDGAGYRSNTKQKHRMWALFAEDNWALTDTLTATFGLRYD
                     DHNVFGSHVSPRGYLVWNASDAWTFKGGVSTGYKTPRPDQLFPGITGFGGQGVLPLVG
                     SPNLKPETSTNYELAAYYEGQRWGFNVTGFINKFEDKIASGGTFPNCEVAPAGSGYCV
                     DIGPGWASLGYSAFTQSVNIDKAETRGAELAAHVDLLDTLQLRGNYTWTKSEQTSGPQ
                     KGLPITGTTPAKHMANASLNWQINEAISLSLIGEGRYDRYRDTLLDANGVSQTRYYED
                     YTIFHLGGSWQATPWLTVNARVNNLFDKDFVSQSCLLLNPSEFSCVDDYATKDQRRSY
                     WISLNAKF"
BASE COUNT         4449 a         8363 c         7223 g         3999 t
ORIGIN      
        1 aagcagtcga gcatggctcg actctacaga cccggtcagc gcttgggctg cagcatggtg
       61 ccggtgcact tgggcgaacc gcagcggcac tcccagatct tcttcagctt cgcggtgtgg
      121 cgctcggcca gggtgatgcc gtagttgtag gtcagctctt cgccggcctt gatatcgcgc
      181 agggcctcga tgaatacctt gtcgcctcgg ctgtcgccgt cctcgtcttc ctcgatcacc
      241 gcctcgcagt tcgggtcgca gctgtggttg atccagcgtg cgtcgttgcc cttgtagttg
      301 gcatcgatca cccagtcatc gttgagggtg aacaggaagg tatggccgct ttcgacgtcg
      361 ccgctgtcat cggcatcaac gtcgccgtgg ctgcgcagca ggcccttgta ctggatcacg
      421 cgctcgccct gcttgatcgg ggccacggcg aacacgccgt tgccatggat ggcggacttg
      481 cgggcttgga tcttcttcgg catcggcacg ggctgtttgc agcgaatgga acggggattc
      541 tcgcccattc cgggtgattg cgaaaatcac cccattggcg cagcattgcg ccctggcaac
      601 ggccccggtg tctccctccc ggcctggccc cagcgccggc tgaatgccct gcttggatgg
      661 cggcgaataa aagcgtacaa tttcagtccg ctttaagaac cactcgcatc cccatgttgc
      721 gcgtcaccaa actcaccgat tacgccaccg tcgtgctgac cgtgcttgcc gcccgtccgg
      781 gcgaggtgct cagtgccacc gagctggccg aattcaccgg tctggagccg cccaccgtca
      841 gcaaggtgct caagccgctg gcccaggccg gcctggtcga gggcctgcgc ggtgtccgcg
      901 gtggctaccg cctgacccgc ccggccctcg agatctcgct gttcgaagtg gtcgaggcaa
      961 tggaagggcc gctggccctg accgaatgca gccacgacca ccaccagtgc ggcatggcgc
     1021 ccaaatgcgg tgcacgcagc agctggcggc tgatcaatga cgtggtctcc gaggccctgc
     1081 gcgacgtcac ccttgcgcag atcctgcccc ccctccccct tgccgatgac gaacagcgcc
     1141 gcaccatcgc tgtcgacgtc gtctcctgat ccgtaggcag ccccccatgg ccaccgaaac
     1201 catcgaaaac gtcgcccacg acgacacccc caaccgcgag atccacgagc agctcggccg
     1261 caagtattcg gccggcttca tcaccgagat cgagtcggac tccctgccgc cgggcctgga
     1321 cgaggacacc atccgtgccc tgtcggccaa gaaggaagag ccggagtgga tgacgcagtg
     1381 gcgcctggac gcataccgcc acttcctgac catgccgatg ccggactggg ccaagctgga
     1441 gatcgccccg atcgacctgc aggcgctcag ctactactcc gcgccgaagg gcccgaagta
     1501 cgcctcgctg gatgacgtgc cgaaggagct actcgacacc tacgacaagc tgggcgtgcc
     1561 gctgcacgag cgcgccaagc tggccggcgt ggcggtggac gcggtgttcg actcggtgtc
     1621 cgtcgggacc accttccgca aggaactggc cgagaagggc atcatcttct gctcgatgtc
     1681 cgaggccatc aaggaacacc cggaactggt gcgtcagtac ctgggcaccg tggtgccggt
     1741 gggcgacaac tacttcgccg cgctcaactc ggcggtgttc tccgatggca gcttcgtgtt
     1801 cattcccaag ggcgtgcgct gcccgatgga actgagcacc tacttccgca tcaacgccgg
     1861 ccacaccggc cagttcgagc gcaccctgat cgtgtgcgaa gacaaggcct acgtgtccta
     1921 cctggaaggc tgcaccgcgc cgatgcgcga tgagaaccag ctgcacgccg ccgtggtcga
     1981 gctggtggcg ctggaagacg cggagatcaa gtactccacc gtgcagaact ggtacccggg
     2041 cgacgagaac ggcgtcggcg gcatctacaa cttcgtcacc aagcgtgccg aatgccgcgg
     2101 cgcgcgcagc aaggtcacct ggacccaggt cgagaccggc tcggcgatca cctggaagta
     2161 cccgtcctgc gtgctgctgg gcgacgactc ggtgggcgag ttccactcgg tggccctgac
     2221 ccaccaccgc cagcaggccg acaccggcac caagatgatc cacgtcggca agcgcaccaa
     2281 gagcaagatc gtcagcaagg gcatcagcgc cggccgcggc cagaacacct accgcgggct
     2341 ggtcaaggtc gaccgcaacg ccgatggcgc gcgcaactac acccagtgcg attcgctgct
     2401 gatcggcaag cagtgcggtg cccacacctt cccctacatc gaggtgaaga acccgggcgc
     2461 caccgtcgag cacgaggcca ccacctccaa gatctccgac gaccagctgt tctactgccg
     2521 cgcccgtggc atcagccagg aagacgcggt gtcgatgatc gtcgacggct tctgcaagca
     2581 ggtgttccgc gagctgccga tggaattcgc agtggaagcc aagaagctgc tggaagtctc
     2641 gctggaaggc tcggtgggct gaccgcccgc cccgctcctc gcaaacgcat tctctttacc
     2701 ggcgggctgc ggcccgcccc acggaaaccc caccatgctg aagatcgaaa acctccacgc
     2761 ccgcatcggc gacaaggaaa tcctcaaggg cctctcgctg gaagtgaagc ccggccaggt
     2821 gcacgccatc atgggcccca atggcgccgg caagtccacc ctgggcaatg tcctggccgg
     2881 ccgcgacggc tacgaagtga ccgaaggcag cgtgcagttt gaaggcaccg acctgctgga
     2941 tcaggacccg gaagcgcgcg ccgctgccgg cctgttcctg gcgttccagt atccggtgga
     3001 aatcccgggc gtgaacaaca cctacttcct gcgcgccgcg ctgaacgccc agcgcaaggc
     3061 acgcggcgaa gaggaactcg attcgatgca gttcctcaag ctggtgcggc agaagctggc
     3121 cgtgctgcac ctgaaggacg aactgctgca ccgtggcgtc aacgaaggct tctccggtgg
     3181 cgagaagaag cgcaacgaga tcttccagct ggccgtgctg gagccgaagc tggcgatcct
     3241 ggacgaaacc gattcgggcc tggacatcga cgcgctgaag agcgtggccg acggcgtcaa
     3301 cgcgctgcgc gccgccgacc gctcgttcct ggtcatcacc cactaccagc gcctgctgga
     3361 ctacatcaag ccggacgtgg tgcacgtgct ggccgatggc cgcatcgtca agagcggcgg
     3421 cccggaactg gccctggaac tggaagcgca cggctatgac ttcctgaagg atcgcgtggt
     3481 gcgcgaggcg gcggtctgat gagcgcgctg ctcgactcga tggcccaggc cttctgcggc
     3541 agcgatgcgc gccgcgaagt gctggatgcg gccctgcgcg acggcctgcc cgccgcccgc
     3601 aacgaagcct ggaagtacac ctcgctgcgc cagctggaac gccgtgcgtt cgctgcggcg
     3661 ccgctgcagg gcccggcgct ggacgccacg ctgctggagg acatcccggc gccgcggctg
     3721 gtgttcgtca acggtcgcct cgatgccgcg ctgagcgacg tgcaggcgct gccggccggc
     3781 gtgcagctgc agccgctgtc ggccgcgctg gccgacggcg aggacgcggt gcgtttcctc
     3841 ggccgccgct acgagcgcag cgaggaaatc ttcgcccgcc tcaacgccgc cctggccgat
     3901 gaaggcgtgg tgctgcgcgt ggacgaaggc gtgcaggtgg acgtaccgct gcagctggtg
     3961 ttcgccagcg tggccggcga taccgacctg gcctggcacc accgccacct gatcgaactg
     4021 cgtgccggcg ccagcctggg cgtggtcgag caccgcttca gcgtgggcga ctccgcccac
     4081 ctcgacaaca ccgtgctgca cgcccacgtc gcccgcgatg ccgtgctcaa gcacgcccgc
     4141 gtgcaggccg gcagcgcgcg ccagaccagc ttcctgcgca ccgacgcggt gctggcccgc
     4201 gacgcgcagt accaccgcgt cgatctggaa ctgggtgccg cgctcagccg ccatgaactg
     4261 aacgtgcgcc tggaaggcga caacgcccag ctgaccgcca acggcgtgct gctcggcaat
     4321 ggccgccgcc acgtcgaaac ccgcctgggc atcgaccaca tcgcgcgcga taccacctgc
     4381 gaactgctgt ggcgcggtgt tgccgccaac cgcagccggg tggtgttcca cggtggcatc
     4441 cagatccgcg aaggcgccga cggcaccgac gcgaacctgt ccaacaagaa cctgctgctg
     4501 tcggccgacg ccgagatcga cacccagccg acgctggtga tcgacgccga tgaagtgaag
     4561 gccgcgcatg gcgcgaccgt cggccagctc gatgccaacg cgctgttcta cctgcgctcg
     4621 cgcgggctgc cgcaggccca ggcgcaggcg ctgctgagcg ccgcgttctg ccatgaaccg
     4681 ctgaagatcc tgccggaagc actgcgcgag cagctggcac gccgcctgga caaggcgctg
     4741 gtcgaggcgg gtgtggcatg aacctgtcca cgccgcgccc gatcgaagaa cgcaccggcg
     4801 cccccgactg ggaccgcgtc cgcctcgact tcccgctgtt gatgcgcgaa gtgcatggca
     4861 agccgctggt ctatttcgac aatgccaaca ccggtcagaa gccggtgcag gtgatcggcg
     4921 cggtggacga gttctaccgc cgctacaacg ccaacgtcag ccgcgcggtg catgcactgg
     4981 gcagtgaagc caccgacgcc tacgaaggtg cgcgcaacaa gctggcgcgc ttcctcaacg
     5041 tgcgccccag cgatctggta ctgtgcagcg gcaccacctt cgccatcaac ctggtggcct
     5101 actcgtgggc actgccgcgg ctgaaggccg gtgacgtgat cctggtgtcg cgcatggagc
     5161 accacgccaa catcgtgccg tggcagctgg tcgcccagcg taccggcgcg accatccgcg
     5221 tggccgagat cacccccgac ggcgcactgg acctggatgc gctgcgcgca gcgatgaccc
     5281 ccgaggtcaa gctgctggcg gtcacccacg tctccaacgt gctgggcacg gtcaatccgg
     5341 tgcgcgagat ctgccgcgaa gcgcgcaagc gcggcatcat caccgtggtc gatggctcgc
     5401 aggccgtgcc gcaccgcaag gtggacgtgg ccgcgatcgg ttgtgacttc tacgccatca
     5461 ccggccacaa gatgtgtggc ccgaccggca ccggcgcact gtgggcccgc cgcgagcacc
     5521 tggacgcgat gccgccgttc ctcggtggcg gcgaaatgat caaggaagtc agcttcgacg
     5581 gcaccgtgtt caacgatgcc ccgcacaagt tcgaagccgg cactccgaac atcgccggct
     5641 tcatcggcct gggcgtggcc gccgactacc tgcagcagct gggccaggag aacgtggaag
     5701 cacgcgaagc cgaactgctg gcgcacttca ccgaagagct gcgccgcgtc gacggcctgc
     5761 gcatcatcgg cgaagcgccg gaaaaggctg cggtggtctc gttcctgatc gacggcgcgc
     5821 acgcccacga tctggccacc ctgctggatc tcgaaggcgt ggccgtgcgc tccggccaac
     5881 actgcgcgca cccgctgctg cagtactttg gtgtagcggc cacctgccgt gcctcgctgg
     5941 cgttctacaa cacgcacgcc gagatcgagc ggttcatgac tgcgttgacg aaggtgcgga
     6001 agttgctggg ctgagattcc tggcgaagcg cgggatagat gcaaacgccg caggaaactg
     6061 cggcgttttt tgttgctcgt tggacgcaag caagcagagg cgtgactgag aaacgctgag
     6121 tgatgccagg aactggcaat ttcaccgcaa tgccgatcca tccatcatca acggccttga
     6181 ggcaccgcct tctacacgcc agaaagcctg ggtaccccgc aggcaatcaa gaacaagtac
     6241 atcatcacga cgcccctcag cctcaccgtt catcccactg gagcgcccac gccttgaagc
     6301 tacaaaaaaa tgcagacatc aactaattat ctcaactcac gcccccaccc cactcctcca
     6361 caatcttctc gactgccagt atctgatctt gcgcatagga tccatcccgg aaacggatat
     6421 cagcatcatc aagataatgc catatcaaat gcgggacatc tattccacaa acgcttgact
     6481 gaagggttcg cttaagcgcc tcggccctcg tataccaagc agagacttgt tccgcagaag
     6541 caggttcgga ttccagcaac atccgcaggc aggcagcagc ggacttcact tcatcagcag
     6601 cactcaccgg ggcacctgtt tccttatcca ccgaggatca aacaatacaa gatcagcagc
     6661 ctcaccgcgg cctgcagatt caagattatt atgcagaatc ggagttctcc cattattgac
     6721 accatgaagg tgaagtcgct ccacccatct gccattccgc gagcgatcgg acgtgaggcg
     6781 gccgccagct tgagcgtgct ggcattgacg acgattgctg cgccataaat cgtcccggcc
     6841 tccggtacgc tcccagttga gcccgttgcg agaacttctt tcccgcaatg tttccagtgg
     6901 gtaccaggcg gccacatcac gggataaatg caaacgccac agggaattgc ggcgtctttc
     6961 tgttggtgga gctatgcgaa cactcagcct gcgaaagccc tgctaacagc cacggaaccc
     7021 acgcatcgag cacagggttc ctcgcatgcg cgcacccgac atcatcgacc cctggcgata
     7081 tttccgatca gccaacaagc atcgagatgc cgcaggccac caagaacacg taggtcgcga
     7141 caacacccct cagcacccac cgctcacccc gcgtgatcat cagacctttg ccggaaagcg
     7201 caagcaatcc aatcccgcgc aggcaccgaa accaccagtc aaccctgatg atgccgaccg
     7261 cctcaagcac ttccggccgc ttccgctcca tcttcagcag catccggtgc gccgcaaatc
     7321 catttatcca catgcctccc agaatgacgg aagagcagac aggatagctc tcaataatgc
     7381 ccgtcaccta gtccctccca gaaggaaaat ttgaacttca ttcaacctca attaccgccc
     7441 cataccgaat cgcaaagccc cacgacgagc aggatcatga aagaaatcat gcccagatgc
     7501 aggaaccgac tcgcaagccg gtgcgaatcg cagacatcct tgctcaagag cactccatcc
     7561 aagcgccctt cccttaccgc acgcagttgc ctgtatgtcg tgtcgaatga tgccagacct
     7621 cttccggaca actcagggtg atcgcgccgc aaacgcatct tgaattcagt gcagaaatag
     7681 aagtgtgccg gatagaagat cagaatccca acgattgaaa acaagaagag ccagtttata
     7741 accctatggt tgcccatgct gcgccgctgc acgacgaccg caaaagtcat ctgcagaggc
     7801 atgtaatgac ctatcggcac ccgcctcgga caccagcaga atcaatcctg tcttcacaaa
     7861 ctgcttcatc ggaggcgagc ttgatacctg gaactcactt cagatcttcg agatcaacat
     7921 acacttctcc gaaagtagct tttggaatcg gaccagggac cctcaaagat tgaacatcaa
     7981 gtgggggatg catttcgccg agaagaagat catccgtcga cccgtccgtc ttcctaagcc
     8041 tgaacgcccc agtcactgat acccacgagt aggcatagcg atcaaacacg tcactctgga
     8101 gatctattgg gcccctgata cgaacttcgg tctcatcagt cactccagcc tcgaacagct
     8161 ccttgctgga gctcaataca aagtgccccc gactaactcc gagatagccc tccatgcgta
     8221 tcgatttccc atcgaatagc cgaggagtgg cagccagcgc ccggaagctg actcgacaag
     8281 ctggattctg gccgatccca cagccctttg cgggcgctgt ctgcgctcct tcctgaagac
     8341 cgcaaccgac cgcggaaatc gtcaagaaga aggccacaca aagctgataa tttagtttca
     8401 tttccctcca gcacgaagct ctcgctgttg gcgggtggca acgcggcatc cgcagttgcc
     8461 gccaccgcgc gccgcagtag cgtaggggcc gacattgcag tcgaaccgcg ttacccatcc
     8521 gccaccactg ctgctttcaa tcaggaaaac ccaccccgca gggcggaatt ccgatccgct
     8581 catggcgcaa tctctgaaga tccatctcca tcaatgcgcg cgtagactcc gggggatcaa
     8641 gacgcaagcc ctgctcaagg atctgcatcg cacgtttgca atctcccccg ccctgttcca
     8701 tagatagaaa cagtgccaat cgctgcattg cactgacatc cattctcgcg gcgccctcct
     8761 caagccagta gcgataccgc tccatatcgc cacgtgtcga atagtgccat tcgagcttta
     8821 ggcgcgcttc ggcatcccca ccttcagcca tcgatatctg attctgtagt tccttctcag
     8881 aaagaaccaa actcggcgct tctccagctc tcccaaggcg gggttcaccc tcaccctgaa
     8941 ggccttcact gccgcaagcg gcgagtagca cagacaaaac aacaaaaaac aaagggactc
     9001 tcattgcttc accttgaccg tctctattct acggatcctg gaacctagct caggctcggc
     9061 aaattgatag gaaatggcgc catcggcttt gatcgtaatc gagcgaatag cagggccagt
     9121 tggacccgcg cctccaggtg agaacttctg ccacacacca gcccccccgg ttccgttctc
     9181 acccaggctg acgcgcagcg tcatatcatc tcctggcttg tagttctttg gatagcgaac
     9241 aaatccattg ggagcataga cagacgactt attcaggttt gcccacccct gagcaaaagc
     9301 ccttgcctta cctatttcgg cccccaggtg acaaccggcc atgagtattt cctgcccctg
     9361 ctttagtcca aactgggttc gagccatatc ccatgagctg accaccgaat agttttccat
     9421 tcgcccccct cgctgatcct gaatgaccgt attgttggcg tgaccggcaa cagtaaactt
     9481 tcctggaata ttaagtgcat cccctgcagc tctgagcccg ttcggatctg cctccccaaa
     9541 cacgttcata tctgccctgc cgtccggatc tttgaatttg tagggattgg cagacgcata
     9601 ccgatagcga ttgaatgagg tgccatccga atcagctgca actggatcag cccccagaaa
     9661 tgtggaagtt tcgaagtcat agtaccgctg ctgcatataa ctcagacccg tctccgagtc
     9721 cgtcacatgc ccggtgtacc ccggcccatc cgtcaacggc cggttgacca ccgcaccata
     9781 cggctcgtac accgtacgct cgatcacctg gccattggca tcggtgatcg ccaccggtga
     9841 tcccagtgca tcggtgtgga tgtactcgac aacctcctgg gcggccgccg gcgccacaca
     9901 agccgccagc accaccagcg cgagtaccgc tcgattcaac agcaaagaga gtccgttcat
     9961 ggcttagtcc cagctcagta caccgcgggt gaccggccgt tcggccgacc agggggaaca
    10021 cccacctgca ttgcaggcac gcacgcgata ctcgtgcgcg cagtacgtcc cgccgctgtc
    10081 attcacgtag gttgaggggc ccgtgtacag acgctggcca ccaccgccgc tctcaagctg
    10141 atactccgtt gcgtctgcca ccggactcca tcctgcggag cactgcacct gatagggcgg
    10201 cctgcgcgtc gtcagccact ccgccaggta aaggctcgtc gcccccggcg gcagcaccac
    10261 cgccaccgtc acgactcccg aatacgggct gcacccgacg aaattgcagg ccctcacccg
    10321 atacgcatag ctgcccttgc cacggctggc gccaaagctg ttcgcagcgc cgttgtgcac
    10381 caccgtccag ccaccaccgt tggcactctc ttccagcacg aagctctcgc tgttggcggg
    10441 caccgaccag ctcaggctgt actgcggcac gttgaccagg cccggcgcac tgatcaccgg
    10501 ctcgatcgcc ggcggcccga tcaccgccac cgatgccgtg cccgaccacg gaccgcagcc
    10561 ggcgccattg caggcggcaa cgcggtagcc gtagttgccg acaccgcgtg ccgcagtggc
    10621 gtaggagccg gcatcaccgt cgaacagcgt cacccatcct ccaccattgc tgctttcctg
    10681 cagcgtgtag cgcgtggcgc cggccacccc gttccaacca atgccgatgc tgcctggtgc
    10741 ggaacgtgcc ggcgccgaaa ttcccggcgc gccctcaggc ggatacacca cggtcaccgc
    10801 cgcactggcg ctgtaggcgg tgcatcccac cggattgcag gcgcggacac gatagccgta
    10861 gctgcccgca cccttgccgc tgaagtccct ggattgaccc gcagcattgt gcacctgggt
    10921 ccaggcgcca ccattggcgc tctcctccag ctcatagcgc tcggcaccgg acgccacaga
    10981 ccagctcacg ccgtaacttc cattgaaggc cgtcgccggc acgctcaggg ccggcaccgt
    11041 ggacggcgcc agcgctaccg caaccgaagc gacgttgctc cactcaccac ataccgcgcg
    11101 gcaaccgcgc acgcggaact ggtaggtacc ggtcgccagg ccggtgctgg tgaacgattg
    11161 cgccgcgccg tcgaagacga tgctccaggc accggccagc gcacgctgca gttcatagcg
    11221 gttggccccg ccggccgggc tccaggtcag gttcacgctg ccttcggtga tgtagccggg
    11281 cgcgctcagc gcaggcgccg cgggggctgc tgcgccgtgc acctgggcca ccaggctgcc
    11341 ggacaggtac aggtagtcgg tctgcttgcc cgtgcgctca ttgcgctgga aacgcagcac
    11401 gccgcccttg tcgtagaacg agtagattgc ccccttccca ccggcgctgg ccttcacccg
    11461 gcgaccatgg gcgtcgtact cgtagctctc cgccgcgccc gcatcccgca ggcggttgcc
    11521 gtagtcgaac gagaatgcct gaccgttgcg gaccgacagg ttgccctgca cgtcgtaacc
    11581 caggcccgtc acggtcgccc ccgtcccggt ttcgatcacg ttgaccaggc gattactcgg
    11641 atcgaagtag tgcgtacggt cgcgactgcc gaccctggca cggcgcaggt tgtccagtgc
    11701 gtcgtactcg tacagtgcat tgccgaagcc cggcgcggtc accgtacgca accggtccag
    11761 gccgtcatag gtcatgtcac ggttgccggg tgcgcccgga agcccgtcgg aaatggccat
    11821 cacattgcca ccggcatcgt aatcgtagct gtcatcgagc accgcggccg cagcggtcgc
    11881 atcgcgactg cgctccggca ggccacgggc attctgggtc agggtatgtg cgatgccgtt
    11941 gccgtaaacg aatcgcgcca gcgcaccatt ggcaaaatag ctggcgctgt ttgcgtagcc
    12001 gccgacagct gtagcccgcc ccagcgcatc cggggcatag ctgacgacgc gcccgcccgg
    12061 gtaagtgttg ctggccagcg tgccgttggc atcgtagccg tacgccagac tcaggttgcc
    12121 cagatccgga tgctgcagcg tctcgctgct gagcaggcgc cggcgattgt attgatagcg
    12181 gttgacgacc atcggccggg ccgggtcgtt ctgcgtactg atttccgcgg gcaaggcatc
    12241 cggcgtgtag gaccagcgct gatttccgcg cccatccggg aacgtcaggg tcgacagtcg
    12301 attggcagca tcgtagctgc gcgctactac acggccgctg gcaaaggcct cactgcgatt
    12361 gcagtcggcg gcgctgttca ggccggtccc ggctgcggac cacagcacgt tgccggccgc
    12421 atcatagtcc tgcaccgtcg cgccggtttc cggttcgatg gtcttgcaca gctgctggta
    12481 accgtcatag acgtagcggc gggtcaacgc ctggctgcca tcggccgtgc ggcgggtgat
    12541 cgccaacggc ttgccaagcg tgtcacgctg gatctcggtc accacgcctt ccggatgctg
    12601 cagcgtcagc ggcatctcgt agctgggctg gtcgtaggca agatgccgcg tggtggtggc
    12661 ctgcccgcgc gggttggtca ccttcaccga caggttgccc acatactcgg tgcgcgttgc
    12721 cagatcgccc agttcggacg attggctgac taccaccggc cggcccaacg catcgtactg
    12781 cgtcgtggtg cccgtcattg ctgcattgat gtcggtgagc tgtcgcgtgg ggtacgacgc
    12841 aaacaccgtc ttgccactgc tgtcgtagcg ggtcaccacc gcactgtcga gcgcgttgtt
    12901 ggcattctcg gtaaccagta acggacggaa catggcgtcc agataggtgt cggtacggcg
    12961 tccgccctgg gtacgggagt gcttccacgc accggccggc acacccagct gggcaccgcc
    13021 cagccgctgc aggtccatgg tcacaccgtt ccagttcact tcatcgccac ccgggaactg
    13081 ctggctgcgc agccgcccca tgctgtcgta gctgaagctg gtggttgcgc cgacttcatc
    13141 ggtcagtgaa gcgatccaac cattgtcatc gacggcaacg gtacgcactg cgccattggg
    13201 cgcctcgggt gtggctggca tgcgcagctg ctgcgggatg ccgcgcttcc atccagacag
    13261 gtgactggta ttgccacggc cgtcggccac cgatgccacc gtaccgtcag ctgcataggt
    13321 cacctgctgc gccaagcggc cgaatgcata ggcgcgcagc ggcagcgcat tggccgggtc
    13381 gaactcggtg cgcgactcct cgatgccgtt gagcaggctg cgtgccacct ggccattcac
    13441 ccacaaggcg gcattgtcgt aatagccggt cgtccgggtt cggctctggc cggcagaatt
    13501 tccttcgtcc accgtgacct cgcggacgaa ggcatcaaag gcctgtacgg tgcggatgaa
    13561 ctgcacgcca tcctggttca cgaccgtact ctgcaccggc cgattcagat gttccccaag
    13621 ttcggtcgcc ccgtacttga gattccgccc cgcctcacgc ggaaacggag cattggcaat
    13681 ctgcgcgtcc gggtaatagt tgttgcgctc cgtgcggacc acagtgccgc cagcgctggt
    13741 actggtcgac agcagcagac cgtcgttgta gccgacttcc ttgccgaatt cgtatgtccg
    13801 gatgacccca tcgggcaggg tttcaatcgt tatcttcggt tccgcctgcc cgaccgggat
    13861 cgctggccag ccggcctggt caacccgcct gtcgtactcc caccccaggt tggtgtattg
    13921 atagctccat tgcgccgcgg gcatccccgg accgcttatc cgctttgcca ccagcgacat
    13981 cgcgtcgcgg tagatgggcg tgaggttcca cccatcggcc agcagctggt cgtcgccgga
    14041 cgtctggcaa ttgaatggca cgttcttgcg cccatgccgg aagggtcgga acacgaaggt
    14101 tccgacggcc ccagagggat gggtgatgga cgccgccact tcggtctgca cgatcttgtt
    14161 cgtcttcgcg cacaacgccg ggacttccat gtaggtccag acgtcctgcc cggtgtactc
    14221 ctggtacttc ttcgtcacat tgaccggagg caggtcatag ctccaggcag tgccatcggg
    14281 cagcgtgacc gattgcagcg ttcccgccgg cgtatagccg taggtccagg tacggccccc
    14341 cgcctgggcc gttgcgatgc gcccctgcga gtcataggtc aggctgatgc tgcgcccgtc
    14401 gctggcgatg atgcgatcca ggcgcccgcc gctccactca tagcggaccc agttgccgaa
    14461 tcgatcgacg acctgcgacg gatagaggaa gaccttcttc cgctgcagcg tcgaatgggt
    14521 gatggtgtcg tagggctgca tgacagccgg gtcgttgtgg cgcgccacca tccagtcgaa
    14581 gtagtacttg gttccgtccg gcgcatgccc caggaagcct tcgcccggct ggccgctctt
    14641 gagggaactg aggcaggaga agaaccatcc gcccttggta ttccacgggg cgggcatgcc
    14701 gagttgtggg atgggctggc gcgtatctcc gctgccggcg agaaccgttt caccgctgcc
    14761 gccaggcagt gacaaccgca ctccttccca ataggtatgg ggtgcgaaca cggtcgtctg
    14821 ggtatgcttg tagttccata catccagtgc cggaggtgcg gagacggtcg agcaacgcgc
    14881 gctcggtgtc caatgacctg ccaccgccgt ttccggctga tctccgtagg tgcccgaaag
    14941 cgacggaatg tccagcgtcc agtttccata ctcgttgtcg tttgcgctgc cgccgatatc
    15001 tccatagctg cggcccagcg acaccgccag gccaccgttg ccgggaatgg agatatcggt
    15061 ggcactgaaa ctgacagagc cgtcatagag gttgaccttc tcgccgaaga tgtctccctt
    15121 cagcggctcg accagatcgc cgtatttcag ccgcttgtcg tattcctggc gccaggtggg
    15181 aacgatctgg gcagaggcca gtgccggcgc cagcgacagg gccgtcacca tcagcagcag
    15241 cgaagacctg atcgggccgg catggcgcga gcggagcgtg atgcggaacc gcatggggat
    15301 cctccttgga tcgtccgtcc ttgaaagcgc gcacagacag caggacctgt cccctggcca
    15361 gcgcgatcta cacccattta tgaatcaaac atgaagatcg cgtcaagacg acattcacga
    15421 caggatcggc aaacagcctg ggggcagcct ccactccggt ccgcacctcg acgctggacc
    15481 tgcgccgctg ctgccgtgcc ccatctagaa tgcccccatg accaccctga cctaccgggc
    15541 cgccacgccg gccgacatcc ccgccctgat cgccctcgtc acttcggcct accggggtga
    15601 tgccagccgt gccggctgga ccaccgaagc cgacctgctg gacggcgccc gcatcgacgc
    15661 cgaaggcatc caggccgacc tcgaccgccc ccgctcgacc atcctgctgg ccgaacgcga
    15721 gggccggctg gtggcctgcg cccacgtcgc cgatgtcgac ggcaagggct acttcggcat
    15781 gttttcggtt gacccggccc agcagggcgg cggcgtcggc aagcagatga tggatgcggc
    15841 cgaagcgcac gccgcgcgcg aatggaacgt gccggtgatg cagatgacgg tgatcgacgt
    15901 tcgcgacgag ctgatcgcct tctacgagcg tcgtggctac cagcgcaccg gcatcaagaa
    15961 gccgttcccg tatggcgacg aacgcttcgg catccccaag cgcgacgacc tgcgcttcga
    16021 gatcctggag aagccgctgg ccggagccac cgcgtgagcg aggcctggac cttcgtctgt
    16081 gccggcgccg aactgctgcc gggtgaaatg aagagcgtgt tcgacgaagt gaccggcacc
    16141 ccgatcgtgg tgttcaacct cgacggcgac ctgtatgcat tggaagacca atgcacgcat
    16201 gaagagttcg agctgtcctc gggcgagttc aacaccaccg agggcagcgt ggagtgcgtg
    16261 ctgcacggcg cgcgctttga cgtgcgtgat ggccgcgccc tgtgcgcccc ggcctacacc
    16321 ccggtaccca agttcccggt gaagcgcgaa cacgacgcca tctggacccg cgacgaccgc
    16381 gactgaggcg ccccaccccg gggcagccaa cccacggggt ggagctgccg gaagcggctg
    16441 agcgcccgtt cagggcctcg tagggccatc ctggcagccc gcctcatcgc gcacatgcga
    16501 atcattatcg ttgatgttat tctacgtaac atcttcgtaa cgactccacc ccgcgccatg
    16561 gcttcgcccg cgcccgccgc cacgctgtgc cagctcgccc gccaagggtg gccgctgctc
    16621 gtggccgcgc tgctgacgct ggtgctgggt tggtcggcgt tgcacgaagg gcgcgatgga
    16681 ccggccacct acggttggca ggcgcacgct gaagaactgc accaggccat gccgatgccg
    16741 gcgccgccgg ccgacgaatg cccgcagcac gcggtaccgg caccggagcc gccgcttgat
    16801 ggcgagggtg gcacgccctg cgccggcttg gcacccgcgc gcgccgcgct ggtcgcccac
    16861 atcccgctgt ggcgttccga cgccctgcgc tggcagctgc acgatccggc actgcgcttg
    16921 aaccccggcc acgctccgcc cgtaccgcac gccagctgag gcgccctgcg gccgttgccg
    16981 tgcgcctgat gtcgtccacc gcgtagccga gcttcggctc ggctctacag aagcaacctc
    17041 ctgcctgtcg ccgcgcaccc agctgcgccg gctcgccctc gccctttccc gatcccagcc
    17101 actaccaccc aagccatgac ccacatcaag acccgcaagt acgccccgcg cgtttccctg
    17161 ctcgcctcgg ccaccctggc cgccggcttc gcgccgctgg ccgcgcaggc cgccgacagc
    17221 gccgcctccg gcaacaacaa ggccaccgac ctggacaagg tgcaggtgcg cggcagctgg
    17281 ttcaatccgt cctcgccgaa gttcaccgcc gagctgctgg acaccccgaa gtcggtgtcg
    17341 atcgtgtcgc agaagctgat tgccgagacc ggtgcgacca acctgcagga cgcgctgcgc
    17401 atggtgccgg gcatcacctt cggtgccggc gaaggcggca acccgaccgg tgaccgcccc
    17461 ttcatccgcg gcttcgattc gcagagcaac atcttcgtcg acggcctgcg cgacgtcggt
    17521 tcgcagaccc gcgaaatctt cgacctggag caggtggaag tggtcaaggg cccgagctcg
    17581 gcctatggcg gccgtgattc cggtggtggc agcctgaacc tggtgagcaa gacgccgaag
    17641 ctgaagaacg agaccagcgc cagcatgggc atcggtaccg acagctatgc gcgcggcacc
    17701 gtggacgcca actacgtgct gggtgacggc atcgccgccc gcctgaacct gatgaagcac
    17761 gagtcggaca tcgccggccg tgacgccgcc aacgtcagcc gctggggcat cgcgccgtcg
    17821 atcgcgttcg gcctgaacgg cccggcgcag ctgatcgcca gccactacca catgcagagc
    17881 gatgacctgc cggacgcggg tggcttcccg tatggcaatc cgaacggtgc accggcctcg
    17941 aagtgggtcg acggccgccc gatggtgccg gaccgcaaca actactacgg cctggtcgac
    18001 cgtgacttcc agcgcacccg cgccgacatc agcaccctgg atgccagcta cgacttcggc
    18061 ggccacaagc tgcgcaacat cgcgcgcctg ggcaacacca gcaatgatta cctgtggacc
    18121 cagccggacg acagccaggg caacccgaac aactacggca ccttgtggcg ccgtaccaac
    18181 acccgcgccg tcgacgtcaa gagcttcgcc gaccagctgg gcctgaccgg cgccttccag
    18241 accggcgcgc tcaagcacag ctacagcgct ggcgtggaat acagcgacga gaagatgacc
    18301 cgcggcagct acctgattgc cccgggcacc agcaacccgc tgaccggcaa cagcaagtgc
    18361 ccgaccacgg gcgcggccac cggctacaac tgcaccgact tcgccaaccc gaacccgcgt
    18421 gatccgtggg cggccaccca ttcggtgtac cgcagcgaca aggccctgga cgtcgagcag
    18481 cgcaccaaga ccaagtccgc ttatctgttc gacaccatcg agctcaacgc acagtggagc
    18541 ttcaacgtcg gcctgcgcta cgacgactac agcaccaccc tgaccactcc ggtggccggt
    18601 gcagcaccga cccgcgtgcg caatgacaac gacttcctga actaccaggc tggcgtggtg
    18661 ttcaagccgg cggccaacgg cagcatctac ctgtcctacg gcacctcctc caccccgccg
    18721 ggcatggacg gtggcgacgg ttcggacggc ctgaatgccg gcgtcgccga cctcaagccg
    18781 caggacacca agaacctcga actgggtacc aagtgggacc tgctcgacaa ccgcctgaac
    18841 ctgactgccg cgattttcca caccgtgatg aacaacgcac gcgtgaccgt cgacaacggc
    18901 accagccaga acgcgggcaa gaaggaaatc aacggcttcg agctgggctt caatggccag
    18961 ctgaccgatg cctggagcct gtacggcggc tacacctacc tggattcgga actgaaggac
    19021 aacggcttcg tctgcgccgt gtcgggccgc acctgcccgt ccaacatcta cgtgccgtcg
    19081 ccgaacaacg gcaacgtgtt cccgaacacc gccaagcaca gcgccaacct gtggaccacc
    19141 taccgcttcc cgatcggcct gaccgtcggc gccggtgcgt tctactcgga caagcagtac
    19201 ggtgacgttg ccaacaccaa gtggatcccg agctacaccc gcttcgacgc gatggccagc
    19261 tacgcgatcc aggacaacat cagcctgcag ctgaacgtgc agaacctgac cgacaaggcc
    19321 tacttcacca aggcctatgc ctcgcactac gcgagcatcg ccccgggtcg ctcggccacc
    19381 ctggcgctga acgtgaagtt ctgatgtaac ttcgctccac cacggcggca ggctctcctg
    19441 ccgccgtttt tgtttccggc gatactcacc ccatggctac ccgcaccccc atcgacagcg
    19501 acgccctggc cgaactgctg cagcacgatt cgcaagcagc attcgcgcgc gtgcgcgacg
    19561 ccgcgcaggc cggacaagtc gacgcacagc tgctgctcgc gcagatgcac atggaaggca
    19621 aaggcaccgc gcaggacccc tcggccgccc tgctctggta cgaaaccgcc gccaacaacg
    19681 gcgtgccgat ggcgatgaac atgctcggcc gctgccatga gctgggccag ggcacggcgg
    19741 ccgatcccac gctggcagca gtgtggtacc ggcgtgcggc cgacaccggc ctggactggg
    19801 gcctgtacaa cctggccaac ctgctggcca ccggccgcgg cgttgcacag gaccgcgcgc
    19861 aggcgctggc gctgtacacc cgcgccgcgc acctgggcca cgccaagtcg atgaacctgc
    19921 tggcccgcca cctcgaagat ggcctggaga tcgagcgcga tccgcaggcc gcgctgggct
    19981 ggtaccggcg tgcggccgag accggcgatt tccgcggcca ggccaactac gcctcgatcc
    20041 tgctgcaggc tggccagatc gatcaggccg tgcactggtt gaagcaggcg ctggccctcg
    20101 gcagcccggc gttcatggcg cacatcgtgc cggagttggc cgcatccccg catccgcagg
    20161 tgcgcgccct ggtcgcaccg ccgtccccct gaggagttcc gcatgctgct gcacattccc
    20221 gacatcctca gcgccgagca ggtggccgac gtccgccgcc gcctcgatgc cgccgactgg
    20281 accgacggcc gcgagaccgt tggccatctg ggcgcacagg ccaagcacaa ccagcaactg
    20341 ccggaagcct cgccgctgcg ccgcgaactg ggcgaaatca tcctggtcgc gctggcccgg
    20401 cacccgctgt tcttcagtgc ggcgctgccg ttgaagtacc tgccgccacg cttcaaccgc
    20461 tacagcggtg gtggcaccta tggcttccac gtcgatggcg cggtgatgaa cctggccaac
    20521 ggcgagcagc tgcgttcgga catctcctgc accttgttcc tgtccgcgcc cgaagagtac
    20581 gagggcggcg agctgatcat cagcgatacc tacggcgagc acgaggtgaa gctgccggcc
    20641 ggcgacctga tcgtgtaccc gtccagcagc ctgcacaagg tcaatccggt cacccgcggc
    20701 gcgcgcgtgg cctcgttctt ctgggtgcag agcatggtcc gcgacgacgt gcagcgccgc
    20761 ctgctgtggg aaatggacgg ctcgatcgaa cgcctgcggc agaccggcgg cgacgccgag
    20821 gcggtgctgc agctgaccgg cgtgtaccac aacctgctgc ggcgctggag cgaagtctga
    20881 gccggacacg gccgggcctg cgacatcttg gcaatcattc tcatttgcaa ccgctaaccg
    20941 ctctcattac aatctcgccc cgttgatgcc ggcccctgcc ggcagacgtc cggggattcc
    21001 tgcttgctgc gcccgcttcg ccctcgccca ctcatccatc gccagatggg caccgccatg
    21061 cgcggccagc gtcctgcgct ggccagcctg ttggcgtggg tggcgatgct ggcgttgctg
    21121 ctgggcacgc tgccgctgct gccgcatgcg acggcgccga tgaccgtgca ggtgccgctg
    21181 gaagagcgcg gcggcgaagg cccgctgcag gaagaagcac cggccaagct gcgccgctgt
    21241 gccgctgccc cggtgaaagc ggccgagaag tcaccgccgc cgttgctgct ggccagccag
    21301 tggctgcgca ctgaactcga actcgttccc gccacgccgg ccatgcccgg cgtgcgcccg
    21361 gactggccac tggccgctcc ggatacgccc tgggccgatg cgcccgggcg ccgccagcaa
    21421 cgcggccagg cgccgccgct cgcctgatcc acggcccggg gtgaccgcgt gcgcggtcgc
    21481 ctgcgcgcgc cgctgcctgc ttcattcccg tctgctccat ccctgctgcc cctgaccggg
    21541 ccttccgtgc ctgccgcgcc ctgagcgcgt ggcagtgcac caccctgcat ccttcgaggt
    21601 aactgccatg gcccagcgcc atcgtgtccg ttcgtccctg tcccgccccc tgctgaccag
    21661 cgccgtgctg gtggccctgt ctgcccctgc cttcgcccac ggtgacgcct ccggcgcccc
    21721 gcagacgctg gacaaggtgg tggtcaccgc ctccggtttc gaacagaagg tgatcgacgc
    21781 accggccagc atcagcgtgg tcagccgcga ggaactgagc aagcgcccct acaccaacct
    21841 ggtcgatgca ttgcgcgacg tcgaaggcat cgacgtcggc ctggaggcca ccgacaagaa
    21901 cggccgcgcc accatttcga tgcgcggcct gccttccgag tacaccctgg tgctgatcga
    21961 cggccgccgc cagagcaacg tcggccagct gtacccgaac aacttcggcg gcggccagtt
    22021 cgcctacctg ccgccgctgg atgccatcga gcgcatcgag gtggtgcgcg gcccgatgtc
    22081 caccctgtac ggctcggatg cgatgggcgg cgtcatcaac atcatcaccc gccgcaacca
    22141 ggacagctgg catggcgcgc tcacccaggg cttcaccgtg cagcaggacg accagttcgg
    22201 cgatgcacgc accaccgacc tgtacctcag cggcccgctg ctgaaggatc gcctcagcct
    22261 ggcggtgcgc ggcagctact acgacgccaa ggcatcgaac ccggaatggg aggcgctgac
    22321 cctgcccgat ggcacgctgt gggagcgcag catcggcttc ggtggcggtg gcaagtcggt
    22381 ggccaacacc aactggaaca ccggcgtgcg cctggatttc cgcgtcaacg atgaccacga
    22441 gctgtggctg gactacgacg tgtcgcggca gaagtacgac aacagcgaag gccagaccgg
    22501 cacgctggac agcctggcca gcctgtggcg cgtcggcaac gcggtcattc ccaacccgaa
    22561 cggcagcggc acgatcaccc gccgcgtggt gcagccgcgc gtgggctaca ccgcctacca
    22621 gcgctacgag cgcgaccagc tgtcgctgac ccaccagggc cgttacagct tcggcacctg
    22681 gcagacctcg ctgacccaca gcaagagcag caacctgggc cgctcgctgc cgctgaccct
    22741 ggatgaacgc gccaacctgc agacgctgtg gaatgacgtc tgccgccgca ccggcgcggc
    22801 caacaactgc gcggccggac gtggcaatgc actgaccgcc ctcaacccga gcgaaatggc
    22861 acgcctgcag gcattcctgc cgcgcccgct gcgcaccatg gaactggaag gctacgtgct
    22921 cgacacgatg ctggatctgg acttcggctc gcacaagctg accgtgggtg gccagtacaa
    22981 cgacaccgac atgatcgacg gcgtgttcgg catggacggt gccggctacc gtagcaacac
    23041 gaagcagaag caccgcatgt gggcgctgtt cgccgaggac aactgggcgc tgaccgacac
    23101 cctgaccgcc accttcggcc tgcgctacga cgaccacaac gtgttcggca gccatgtcag
    23161 cccgcgcggc tacctggtgt ggaatgccag cgatgcgtgg accttcaagg gtggcgtcag
    23221 caccggctac aagaccccgc gtccagacca gctgttcccg ggcatcaccg gttttggtgg
    23281 ccagggcgtg ctgccgctgg tgggctcgcc caacctgaag ccggagacca gcaccaacta
    23341 cgagctggct gcgtactacg aaggccagcg ctggggcttc aacgtcaccg gcttcatcaa
    23401 caagttcgaa gacaagatcg ccagcggcgg caccttcccg aactgcgaag tcgcaccggc
    23461 cggcagcggc tactgcgtgg acatcggccc gggctgggcg tcactgggct acagcgcgtt
    23521 cacccagagc gtgaacatcg acaaggccga gacccgtggc gccgagctcg ccgcccacgt
    23581 cgacctgctc gacaccctgc agctgcgcgg caactacacc tggaccaaga gcgagcagac
    23641 cagcggcccg cagaaggggc tgccgatcac cggcaccacc ccggcaaagc acatggccaa
    23701 cgccagcctc aactggcaga tcaacgaggc catcagcctg tcgttgatcg gcgagggccg
    23761 ctacgaccgc taccgcgaca ccctgctcga cgccaatggc gtcagccaaa cccgttacta
    23821 cgaggactac accatcttcc acctcggtgg cagctggcag gccacgccat ggctgacggt
    23881 gaacgcacgc gtcaacaacc tgttcgacaa ggacttcgtc tcgcagtcgt gcctgctgct
    23941 caatccgagc gagttcagct gcgtggacga ctacgcgacc aaggaccagc gccgcagcta
    24001 ctggatctcg ctcaacgcga agttctgacc gccg
//
LOCUS       DAOKIP010000044        23677 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.044,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000044 DAOKIP010000000
VERSION     DAOKIP010000044.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 23677)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23677)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23677
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.044"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..763)
                     /locus_tag="QEL58_001518"
     CDS             complement(<1..763)
                     /locus_tag="QEL58_001518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014038652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NYN domain-containing protein"
                     /protein_id="HDS1675998.1"
                     /translation="MSEPEKRIALLIDADNAPASKIDEVLAEVARYGVANVRRAYGNW
                     KSPRLKGWEAVLHEYAIRPIQQFAYSKGKNASDMAMVIDAMDLLYARNLDGFAIVSSD
                     ADFTPMVMRLLTDGVKVYGFGEKKTPEPFVNACSKFTYLEALGQTHASVPDAEQASSE
                     QASNEPATNDDARPRKSGAEMRSDTRLVKMLRRAVSAAEGEDGWSHLGPVGSQIGNQA
                     SFDPRNYGYGKLSDLLAAIGLFELKKDGKSSYVRAL"
     gene            887..2167
                     /locus_tag="QEL58_001519"
     CDS             887..2167
                     /locus_tag="QEL58_001519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014648581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HDS1675999.1"
                     /translation="MSRERVPHLVVVGGGFAGLWATRALARERIRITLVDRRNHHLFQ
                     PLLYQVATAGLSAPDIAAPLRHILGHQRNVEVRLGEVVAIDKQARQIRMADGSMLDYD
                     SLLLATGATHAYFGNDQWADDAPGLKTLDDAIALRRKLLLAFERAEAEPDPAKKAAWL
                     SFAIVGGGPTGVELAGTLAEIARHTLRNEFRHIDPASAKVRLVEAGPRVLSSFPEVLS
                     LKARRQLEKLGVEVLTGTPVSSIDSQGFMLGEQFVPARTVVWAAGVAASPLARTLDVP
                     LDRAGRVQVQPDLTLPEHPELFVAGDLAALNQANGKPVPGVAPAAKQMGKYVAEVIRA
                     RLHGKPAPGPFKYADYGNLATIGRMAAIVHLGRLQLSGILAWWFWLAAHVFFLIGFRN
                     RIVVLLNWAVAYWSYQRSARIIFGDDQEDRRPRR"
     gene            complement(2250..2681)
                     /locus_tag="QEL58_001520"
     CDS             complement(2250..2681)
                     /locus_tag="QEL58_001520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005411213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HDS1676000.1"
                     /translation="MSAIALLFALSASSSPAADPATIAAIEATCHDYVDGQLEADPQR
                     VARSLHPDLAKRAVLGDTPDERLGLRRMSKEELVSLTKQGALKTPKDQWDRRCTVLDV
                     TGNAASVRLETPWFVDYFHMGRFDQRWVIVNALWYPKPKAQ"
     gene            complement(2802..3077)
                     /locus_tag="QEL58_001521"
     CDS             complement(2802..3077)
                     /locus_tag="QEL58_001521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GIY-YIG nuclease family protein"
                     /protein_id="HDS1676001.1"
                     /translation="MAPSLRPWFLYLLECRDGSYYAGISTDVEARFAAHQAGKGARYT
                     RARPPLRVLAVREYPDRAAASRAEWQLKQQPRERKLAWLQAPAGTLL"
     regulatory      3118..3207
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00504"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="glycine riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="glycine"
                     /db_xref="RFAM:RF00504"
     regulatory      3221..3324
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00504"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="glycine riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="glycine"
                     /db_xref="RFAM:RF00504"
     gene            3409..4026
                     /locus_tag="QEL58_001522"
     CDS             3409..4026
                     /locus_tag="QEL58_001522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012540300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trimeric intracellular cation channel family
                     protein"
                     /protein_id="HDS1676002.1"
                     /translation="MLLSIIYLIAISAEAMTGALSAGRRRMDLFGVVMIACVTALGGG
                     SLRDILLGHYPLGWVKHPEYLAFTVCAALIATWVARWMHHFRRTFLVLDGLGLIAFTL
                     IGCSIAREAGHATPIVLIAGMLTGAFGGVLRDILCNEVPLIFQKELYAIISLLTGAVY
                     LLLLHWGVADATAILCCLGGGFALRLLAIHYRLRCMTLVMRHWPE"
     gene            4180..5346
                     /locus_tag="QEL58_001523"
     CDS             4180..5346
                     /locus_tag="QEL58_001523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006396352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MdtA/MuxA family multidrug efflux RND
                     transporter periplasmic adaptor subunit"
                     /protein_id="HDS1676003.1"
                     /translation="MSVAESSRFRRARPLWVVLAIALVALLAWWLWPRNDAGSSDGAP
                     VKTVPVRVARASAEPLALRLKAVGTVTPLHSVVVRSRVDGELLRLHFQEGQQVKAGDL
                     LAQIDPRPYEVKLAQAQGTQQQNLAELENAERQLQRYRELQKQNYVSGQELSDQQSKV
                     RQLQGRRLSDQASVDEARLQLQYTRITAPVSGRVGLRRLDVGNLVRSSDAEGLVTLAQ
                     TAPISVLFTVPEPELPALLDAVQAQPALAVETWDREERRQLARGSLSSVDNRIDTTTG
                     TLKLRAHFDNHDLALFPNQFVNVRLRLGEQPALLIPDAAVQFGSQGNYVHVVGKDNKA
                     QRRNVVLGPADDGRVAVRSGLAAGDQVVIEGIDGLEDGTAVEIIAEEAATRADT"
     gene            5343..8420
                     /locus_tag="QEL58_001524"
     CDS             5343..8420
                     /locus_tag="QEL58_001524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006396355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit"
                     /protein_id="HDS1676004.1"
                     /translation="MNLSRAFILRPVATTLLMVALLLSGMLAYRLLPVAALPQVDYPI
                     IQITTLYPGASPELTTRTITAPLERQLGQIPGLKQLSSTSSGGASVITLQFGLEVSLG
                     VAEQDVQAAINAAGSFLPGDLPVPPVYRKVNPADTPILTLAVTSQGLSLPQVHDLVDT
                     RIAQRLAQLPGVGLVSLAGGQRPAVRIQANPAALAANDLGMDHIRTAIAAANVNLPKG
                     SFDGPIRAVMLDANDQMRSVAEYRALVLAWRDGAPLRLGDVATITDDAENRQLAAWSG
                     TTPAVLVNIQRQPGANVIAVVEQVRTLLPQLQATLPAGVQMNVLSDRTESIRASVRGV
                     QKELVLAIGLVVLVTWVFLRNLPATLIPSVAVPLSLIGTFAVMLLAGYSLNNLTLMAL
                     TIATGFVVDDAIVMLENIARHLEEGESPRDAALKGATEIGFTLVSLTVSLIAVLIPLL
                     FMADLVGALFHEFAVTLAVAIGISLLVSLTLTPMLCARFLKPHAKTAHAPDVFDRVIA
                     LYDRQLRWVLQRQPLMLLATVATLALTVALYFAVPKGFFPVQDSGLVQGISEAPQAIS
                     FQAMHERQQALAAAIEADEAVASVSSYIGVDGNNATLNTGRLLIELKPHGDRDGAAVV
                     MARLQQRVAKIPGITLYLQPVQELGIEDRISRNQYQFTLTTPDLETLEIWTPKLLQAL
                     RQSPAMRDVASDLQMQGRQARVAIDRDAAARLGVSVEAVADALYDAYGQRQISTIFTQ
                     ASQYRVVLEADPARQSGPEAITGLRVRNSAGQTVPLGAIARVEVGPSALLRNHVGQFP
                     AATLSFNLAPGASLGEAVEAVHAARAQVNLPQSIELRLQGAAAAFSSSLSSTLWLILA
                     AVVVMYIVLGVLYESFIHPITILSTLPSATVGALAALWASGRSLDLIAVIGIVLLIGL
                     VKKNAIMMIDFALDAQRTRGMPPREAIHQAALLRFRPILMTTLAALFGAVPLMLASGS
                     GAELRQPLGWVMVGGLLVSQVLTLFTTPVIYLAFDRLQRGRAASPVVVDEARA"
     gene            8417..11482
                     /locus_tag="QEL58_001525"
     CDS             8417..11482
                     /locus_tag="QEL58_001525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012512241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HDS1676005.1"
                     /translation="MTTIARLAQACVQRPVATILLAVALVLAGLLALRLLPVAPLPQV
                     DYPAIEVSASLPGASPESMAATVATPLERALGSLPGISRIDSASTQGQTQIELKFVLG
                     RDIDEAAREVQAAINLARGQLPSGMPGMPQYRKVNPSQAPILALALTSGTLSPGQLYD
                     LASTVLAQKLSQVPGVGEVQVGGSALPAVRVSLDPNALNHAGLALEDVAQAIARANAV
                     RPLGAVGDERQLWQLEAPLQLRQAAQYRELALKFSDDRTLRLGDVAAVADGVEDRYAS
                     GFHNERPAVLLIVSRQPGANIIATVDAIQAQLPQLHALLPANVDMRLVMDRSPVIRAT
                     LHEAELTLVLAIALVVLVVLGFLGHWRAALVPSVAIPVVLFGTLALVALMGFSLNTLS
                     LMALIVAAVLVVDDAIVVLENIARHRELGADRWQAAVRGASEVGATLLSMNVALAVVF
                     VSILFLDDFVERLFREFSLTLVAAMSVSVVVALSLVPMLCARLFVDDAQHASRWQRGS
                     NALFERVREAYLRTLQACLRRLRWPLLAFVAVIALNAWLFQQVPKGVVPKQDTAQLRG
                     FARGDDGLSFQAMQPKIDAYRTLLLSDPAIEDIIGYIGGSNGVNNAFIMIKMKPLAER
                     KVSSQEVIDRLRARLPKLPGGNLYLWVDQDIRLEGGGSSGQYEFQLLSADMAPLREWA
                     PKVGAALRALPELVDVEAQGEAGMRQVVLDIDREAAARHGVDLKTVANMLNNSFSQRQ
                     VATLYDSLNQYRVVMELDPKHTQDPGTLARLQVIDGSGQRIPLSTIASWRYGMAPDRI
                     YHSEQFASIWIQFSLAPGVGLEQATQAINAAMAKLMLPRTVQAKLSGEAGGLDSLRAR
                     QLWLVLGATLAVYLVLGILYESFLQPLVILSTLPSAGIGALLALWVFGNELNLIALLG
                     LFLLVGVVMKNTILLVDFALAGERRGLSAQDAVMDAARLRLRPILMTSLAALLGTLPL
                     MLANGEGWELRQPLGIAIVGGLLVSQWLTLYTTPAMYLALARVRKKKAM"
     gene            complement(11513..11824)
                     /locus_tag="QEL58_001526"
     CDS             complement(11513..11824)
                     /locus_tag="QEL58_001526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5076 domain-containing protein"
                     /protein_id="HDS1676006.1"
                     /translation="MNELIIPDAAQRDESSVEMIRVWIAERGLHTSLKVGMYDDRPGI
                     REERAWGRILADVAQHVADALATSHGMDRDVAIEAIKAAFNEELQAPSSGRSGGFVVR
                     H"
     gene            complement(12077..13150)
                     /locus_tag="QEL58_001527"
     CDS             complement(12077..13150)
                     /locus_tag="QEL58_001527"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014089228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase"
                     /protein_id="HDS1676007.1"
                     /translation="MPPHTDDLRIRTIEPLTPPAQLLAMLPCDDEASDTVSASRAALH
                     QILHGRDDRLAVVVGPCSIHDPHAAIEYAQRLKPLRDALAGELEIVMRVYFEKPRTTV
                     GWKGLINDPDLDGSFRIDKGLRIARGLLRDINKLGLPAGVEFLDVISPQYIADLVAWG
                     AIGARTTESQVHRELASGLSCPVGFKNGTDGNVKIAADAVGAASNPHHFLSVTKQGGT
                     AIVSTTGNPDCHVILRGGKQPNYDAGSVAEACQALAKAKLPTRLMIDASHANSLKNPD
                     NQPKVIEDIAVQLEDGEQRIVGVMIESHLVGGRQELVEGQPLVYGQSITDGCIDWDTT
                     VTVLERLAAAVRARREVKVSEAA"
     gene            complement(13446..13703)
                     /locus_tag="QEL58_001528"
     CDS             complement(13446..13703)
                     /locus_tag="QEL58_001528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005414620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676008.1"
                     /translation="MQSTLQVTLFGPLGETPALQLPEQEGPSVAIPEAVLRRLVSDLY
                     TARSLLNPEQLDEARQELGRVLERWADIHEGLLLDVEVHGR"
     gene            complement(13817..14554)
                     /locus_tag="QEL58_001529"
     CDS             complement(13817..14554)
                     /locus_tag="QEL58_001529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005414622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA alkylation repair protein"
                     /protein_id="HDS1676009.1"
                     /translation="MSAVTTQRQHALNSGRVATTHLAECLAVDFGELLRCVAPSLEPA
                     ALQRMRDASGKGITQRMALAAQLLREAGQGAPALWQYHNSDTVRGWACYLIGSDSRAT
                     LAEKLQQMRTLADDPHFGVREWAWLALRADIVTAPLQALEHLQPWTQETSPYLRRFAC
                     EALRPRGVWATHIAPFKQHPQQALPLLEALADDPERYVQDSVGNWLNDAGKTQPQWLR
                     DLCVRWQHEHPGAANAYIRKRALRSLR"
     gene            complement(14551..15051)
                     /locus_tag="QEL58_001530"
     CDS             complement(14551..15051)
                     /locus_tag="QEL58_001530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014648588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HDS1676010.1"
                     /translation="MIEAKHHALLEEAQRRGHSNVALLRLCFQLLSLSSAIDHDCASR
                     LAPHGLSEGRFIVLFLLHGAGGTLPPHALAERAGVTRATISGLLDGLQREGLLQRRSD
                     AEDGRRLQIVLTAKGTRLAETLFERHTLWIGGLFDGLDASEQQQLSQLLHKVWLHTDA
                     GRGSGA"
     gene            complement(15123..16421)
                     /locus_tag="QEL58_001531"
     CDS             complement(15123..16421)
                     /locus_tag="QEL58_001531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012481386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component sensor histidine kinase"
                     /protein_id="HDS1676011.1"
                     /translation="MLALASLLLATLVSVAVVGWMPRPPPPPMRLDQAMQVLRGERSA
                     AMLGLHLETRMSPPEGLSNDWLTQLVATQLGQPLEHVKLVWSSRGKAPEVQVIEGGAV
                     LDAKARADALQAQVAVLTAMQWTPFELAVRRADGRWQVVGSDHSDLAAWRRQVVLALV
                     TGTVLLAPLAAWAAIRLGRPLRRLAEASANVDLQASTPLPDDGPREVQVLARAISAGR
                     ERLHEQAQEMTRMLAAVAHDLRTPLTGLRLRAEFAPPQQAARMVADIERMDTMIEQVL
                     DYARGELQPLQMRPLDLAALLEECVQSALLRGVDISLDGPDALSWQGDALLLRRAIDN
                     LIDNADRYAGAVQLQAALSGNVVQLDVMDRGPGVDQADRARLLLPFQRSEGSRSRTTG
                     GTGLGLAVAANVARRHGGELLLLPREGGGLIARLLLAKHS"
     gene            complement(16454..17161)
                     /locus_tag="QEL58_001532"
     CDS             complement(16454..17161)
                     /locus_tag="QEL58_001532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005411222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDS1676012.1"
                     /translation="MNTPARVIVVDDDASIRDAIADCLMLHGYQVRVAADAAALDVLL
                     QSERPDAIILDWMMPGEDGLSVCRRLQARAIPILMLSAMGTAPDRVIGLEMGADDYLA
                     KPFDPRELLARVRALLRRQDKLRIQVASELRFCGWRLFPEQRRLLAPDGNELALSRGE
                     FALLLALAERAGRVLGREQLLSLTRGEDSESVDRAVDLAISRLRRRLGQAAPGAEALV
                     QTLRGEGYRFDAEVEVL"
     gene            17347..18198
                     /locus_tag="QEL58_001533"
     CDS             17347..18198
                     /locus_tag="QEL58_001533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012481388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartyl protease family protein"
                     /protein_id="HDS1676013.1"
                     /translation="MWMQGGHPTVALSLDGRAEPLRFVVDSAAGATLVDGRVVRRYGL
                     VDGTAEVSIAQGASTSGAQLRRTRTTTWQLGSWQLQASALQADLASLTKGDDPAIDGL
                     VGNDLTARWDTRWDFVRGELSLSRTGTLHFDDDSCQANALPDRAEGLRDFGFITLTFG
                     GTNIAAVAVVDTGAAQTVLNDAAARALGLRTDGSDPRVRVRSKGTEGLGGKPHPTWLY
                     TLPGLRSDGWQHPAMEVRISELPVFKAIGLDKRPALILGADAMRGGQVDISTGAARIC
                     LRRPTAS"
     gene            18266..19429
                     /locus_tag="QEL58_001534"
     CDS             18266..19429
                     /locus_tag="QEL58_001534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012481389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-lactamase family protein"
                     /protein_id="HDS1676014.1"
                     /translation="MRRAALLLLTLLPLAVLAAPPPVPSPARIDAEAQRLMRAAQARG
                     MALAVIDGGKVVHVAAYGERNAAGEPLRTDTVMYAASLTKMAFGHLVAQLAQDARIGL
                     DASIATALDKPLPDYPPEPKKYADYSVLADDPRWRQLTPRLLLNHASGFANFGFLEPD
                     GRLKFHFDPGSRYGYSGEGLILLQFVIERGRPGEDVGALMQQRVFDRFGMTRTSMMWR
                     EDFAGNLADGWTAQGAAEPHDERSRVRAAGSMDTTIGDMARFAAGYVRGDGLSASMRR
                     ELVRPQLPITTASQFPTLQPELPPAQRHRDLAAGLGVVTFQGPQGAGFYKGGHDDAVG
                     NTLVCIEQGQRCVVILGNDVRAEAAFPALVRFVLGETGAPWEWEYGAKKPFVR"
     gene            complement(19506..21155)
                     /gene="groL"
                     /locus_tag="QEL58_001535"
     CDS             complement(19506..21155)
                     /gene="groL"
                     /locus_tag="QEL58_001535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005411226.1"
                     /note="60 kDa chaperone family; promotes refolding of
                     misfolded polypeptides especially under stressful
                     conditions; forms two stacked rings of heptamers to form a
                     barrel-shaped 14mer; ends can be capped by GroES;
                     misfolded proteins enter the barrel where they are
                     refolded when GroES binds; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperonin GroEL"
                     /protein_id="HDS1676015.1"
                     /translation="MAAKDIRFGEDARSRMVRGVNVLANAVKATLGPKGRNVVLEKSF
                     GAPTITKDGVSVAKEIELADKFENMGAQMVKEVASRTNDDAGDGTTTATVLAQALIRE
                     GAKAVAAGMNPMDLKRGIDKAVVAAVAELKNISKPTADDKAIAQVGTISANSDESIGQ
                     IIADAMKEVGKEGVITVEEGSGLDNELDVVKGMQFDRGYLSPYFINNQQSQTADLDDP
                     FILLHDKKISNVRDLLPVLEGVAKAGKPLLIVAEEVEGEALATLVVNTIRGIVKVVAV
                     KAPGFGDRRKAMLEDMAVLTGGTVISEEVGLSLEKATIKDLGRAKKVQVSKENTTIID
                     GVGDKAAVDARVGQIKTQIQDTSSDYDREKLQERVAKLAGGVAVIKVGASTEIEMKEK
                     KDRVDDALHATRAAVEEGVVPGGGVALVRAVTSLAGLKGANEDQNHGIQIALRAMEAP
                     LREIVANAGEEPSVIINKVKEGTGSFGYNAATGEFGDMLQFGILDPTKVTRSALQNAA
                     SIAGLMITTEAMVAEAPKKDEPAMGGAGGMGGMGGMGGMDF"
     gene            complement(21237..21524)
                     /locus_tag="QEL58_001536"
     CDS             complement(21237..21524)
                     /locus_tag="QEL58_001536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019303525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone GroES"
                     /protein_id="HDS1676016.1"
                     /translation="MSIKPLHDRVVVKPIEADEISAGGIVIPDSAKEKSTKGEVVAVG
                     PGKPLDNGSVRAPSLKVGDKVIYGQYAGSSYKSEGVEYKVLREDDVLAVIG"
     gene            21880..23670
                     /locus_tag="QEL58_001537"
     CDS             21880..23670
                     /locus_tag="QEL58_001537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010481121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease"
                     /protein_id="HDS1676017.1"
                     /translation="MRLLSPLAAACLLALAAAPAQAEVFINELHYDDSTPAGDVGEAI
                     EVVATAGEDLSGYRLYLYNGANASAAVVYANNPVPAGTAAGCGSATIAVVNYPTNGLQ
                     NGPNDGIALVDASGKVVQFLSYEGAITASGGPAAGMTSQNIPVAETNSTAPGTSLQLT
                     GSGSQYAHFTWAESARQTFGSCNNGQTFSGGGTPGPNTPPSVSTTTPAQGSTTFPAAA
                     DLEVVFSETVNLASGAFALSCGTSGSVPLTFPASGRSVKLSTNTALVAGEACRFDIRA
                     GRITDLQGAHPAADSRIAFTVASTGGNPDPGNPGVPAGYYAKVNTSSPSQLRCSLHAT
                     IKGHTAYPYSGSGTSTWTILEIADEDPNNSGRILDAYRNRSYAKVTDRAGSGSGLKYN
                     REHTWPNSLGFASTTGDKGLPYAPYTDTHMLYLTDAQWNADRGNKPFAKCDANCGERA
                     TEANNGQGGGSGGYPGNSNWVRTPDGNAGTFEVWGKRKGDMARAVMYMAIRYEGGKDA
                     ATGQSEPDLELTDDRSKIVKTSSSPAYMGLLSTLIDWHLSDPPDDAERSRNDVIYSFQ
                     GNRNPFIDHPEWATPALFTSAKPATCQLAN"
BASE COUNT         3762 a         8076 c         7866 g         3973 t
ORIGIN      
        1 gcagtgcgcg cacgtaggag gatttgccgt ccttcttcag ttcgaacagg ccgatcgccg
       61 ccaacagatc gctcagcttt ccgtagccat agttgcgcgg atcgaacgag gcctggttgc
      121 cgatctggct gccgaccggg ccaagatgcg accaaccatc ctcgccctcg gccgccgaca
      181 ccgcacggcg cagcatcttc accagccggg tatcactgcg catttccgca ccgctcttgc
      241 gcggccgtgc atcgtcgttg gtcgccggtt cgttcgaggc ctgttcgctg gaggcctgct
      301 cggcatccgg aacgctggca tgggtctggc ccagcgcctc cagataagtg aatttcgagc
      361 acgcgttgac gaacggttcg ggcgtcttct tctcgccgaa gccatacacc ttcacgccat
      421 cggtcagcag ccgcatcacc atcggggtga aatccgcgtc gctggagacg atggcgaatc
      481 catcgaggtt gcgcgcgtac agcaggtcca tggcgtcgat caccatcgcc atgtccgagg
      541 cgttcttgcc cttgctgtag gcgaactgct ggatcgggcg gatcgcatat tcgtgcagca
      601 ccgcttccca gcccttcaac cgcgggctct tccagttgcc gtaggcgcga cgaacgttgg
      661 ccacgccgta gcgggccact tcggccagca cctcgtcgat cttcgaagcc ggcgcattgt
      721 cggcgtcgat caacagggcg atgcgctttt ccggttcgct catgggctcc tcacgggcgg
      781 ttgcctgaac ccgagtatcg ccgatccacg cgggcgctga cgtgacaggc ggccgccgtg
      841 cgaagatgcc aggcgcttcc cccaatgccc ccactggagt gagtcgatga gtcgtgagcg
      901 cgttccccac ctggtcgttg tcggcggtgg ttttgccggt ctctgggcca cccgcgccct
      961 ggcccgcgag cgcatacgca tcaccctggt cgaccgccgc aaccatcacc tgttccagcc
     1021 gctgctgtac caggtggcca ccgccggcct gtccgcgccg gatatcgctg caccgctgcg
     1081 ccatatcctc ggccaccagc gcaatgtgga agtccgcctc ggcgaagtag tggccatcga
     1141 caagcaggcc cggcagatcc gcatggccga tggcagcatg ctggactacg acagcctgct
     1201 gctggccacc ggcgccaccc acgcctactt cggcaacgac caatgggccg atgatgcgcc
     1261 cggcctgaaa accctggacg atgccatcgc cctgcgccgc aaactgctgc tggcgttcga
     1321 gcgtgccgag gccgaaccgg acccggcaaa aaaggccgcc tggctgagtt tcgccatcgt
     1381 cggcggcggc cccaccggtg tcgaactggc cggcacgctg gccgagattg cacggcacac
     1441 gctgcgcaac gagttccgcc acatcgaccc ggccagcgcc aaggtgcggt tggtcgaagc
     1501 cggcccgcgc gtgctgtcct cgttccccga agtgctttcg ctgaaggcgc gccggcagct
     1561 ggaaaagctg ggcgtggaag tgctgaccgg caccccggtg agcagcatcg acagccaggg
     1621 cttcatgctg ggcgagcagt tcgtgccggc ccgcaccgtg gtatgggctg cgggcgtggc
     1681 cgcttcaccg cttgcacgca cgctggacgt gccgctggac cgcgccggac gcgtgcaggt
     1741 gcagccggac ctgaccctgc ccgagcaccc ggagctgttc gtggctggcg acctggccgc
     1801 actgaaccag gccaatggca agccggtgcc cggcgtggcc cctgcggcca agcagatggg
     1861 caagtacgtg gccgaggtga tccgcgcgcg cctgcacggc aagcccgcgc ccggtccgtt
     1921 caagtacgcc gactacggca acctggccac catcggccgc atggcggcca tcgtgcacct
     1981 gggccggctg cagctgtcgg gcatcctggc ctggtggttc tggctggccg cgcacgtgtt
     2041 cttcctgatc ggcttccgca accgcatcgt ggtgctgctg aactgggcgg tggcgtactg
     2101 gagctaccag cgcagcgcgc gcatcatctt cggtgatgat caggaagacc gacggccaag
     2161 gcggtagggc cgcgtgcatg ttcctgtaga gccgagccat gctcggctgc gcttcacgcg
     2221 gattgcagaa gccgagcgta ggctcggctc tactgcgcct tcggcttcgg gtaccacagc
     2281 gcattgacga tgacccagcg ctggtcgaag cgccccatgt ggaagtagtc gacgaaccac
     2341 ggggtttcca gtcgcaccga ggccgcgttg ccggtcacgt ccagcaccgt gcagcggcgg
     2401 tcccattgat ccttcggggt cttcagcgcg ccctgcttcg tcagcgagac cagctcttcc
     2461 ttcgacatgc ggcgcaggcc caggcgttcg tcgggcgtat cgccgagcac cgcgcgcttg
     2521 gccaggtccg gatgcaggga acgggcgacg cgctgcggat cggcttccag ctggccatcg
     2581 acgtagtcgt ggcaggtggc ttcgatggcc gcgatcgtgg ccgggtcggc ggcgggactc
     2641 gatgatgcgg agagagcgaa cagcagggca atcgcggaca tccgggtctc cagctctggg
     2701 cgcggggcga tcatcgcatg ggccgggtag cccatccacg catggcgtgg atctacgggt
     2761 caggcgatgt cggcaggccg gaaccgagcg tgggcgtgga tctacagcag cgtcccggcg
     2821 ggtgcctgca gccaggccag cttgcgttcg cgcggctgct gcttgagctg ccattcggcg
     2881 cgcgaagcgg cggcccggtc cgggtactcg cgcacggcca gcacccgcag cggcgggcgg
     2941 gcccgggtgt agcgggcgcc cttgccggcc tggtgggcgg cgaaacgtgc ctccacgtcg
     3001 gtgctgatgc cggcgtaata gctgccatcg cggcattcga gcaggtacag gaaccacggg
     3061 cggagggacg gggccatggc cggattatgc cgtgctgcac tgcagcggat atactggcgc
     3121 ccgaatgcag gagagaggcg ccgcgctggc gcccgccgaa ggcgcaggct cccatgatcg
     3181 ctcaggccgg tgggctggaa tcccaccaac catgcattcg actcgccgag ctggagagag
     3241 gtcaccgggc acgcccggga cgatccgccg aaggggcacg cggccaacgc cgctgaactc
     3301 tcaggcaaaa ggacagcggg agcggcaccg gtcatcgtca tcccgtcatt gcgcatgcag
     3361 gggcggtggt cgcgcatggc cggccccacc gcgcccggag cctgccccat gctgctgtcc
     3421 atcatctacc tgatcgccat ttccgccgaa gccatgaccg gcgcgctgtc tgccggccgc
     3481 cgccgcatgg acctgttcgg cgtggtcatg atcgcctgcg tcactgccct cggcggtggt
     3541 tcgctgcgcg acatcctgct cggccactat ccactgggct gggtgaagca tcccgagtac
     3601 cttgccttca ccgtatgcgc ggcgctgatc gccacctggg tggcgcgctg gatgcaccac
     3661 ttccgccgca ccttcctggt gctcgacggg ctgggcctga tcgccttcac cctgatcggc
     3721 tgctcgatcg cgcgcgaggc cggccatgcc acgcccatcg tgctgatcgc cggcatgctg
     3781 accggtgcct tcggcggcgt gctgcgcgac atcctctgca acgaggtgcc gctgatcttc
     3841 cagaaggagc tgtacgcgat catttcgctg ctgaccggtg cggtgtacct gttgctgctg
     3901 cattggggcg tggccgacgc gaccgcgatc ctgtgctgcc tcggcggcgg cttcgcgctg
     3961 cgcctgctgg cgatccacta ccgcttgcgt tgcatgacgt tggtcatgcg gcattggccg
     4021 gagtgattgg ctaccattgt caccccgtcg ctgctgcgac ggcatccagc cacgccgcgc
     4081 ccgcggcccc gccagacact ccctccccgt tgcccgtggt tgccgtgtac gcgccgacgg
     4141 gcccgcatga ccctgcgcgc gcagggcgca ggatgcccca tgtctgtcgc cgaaagttcc
     4201 cgtttccgcc gtgcccgccc gttatgggtg gtgctggcta tcgccctcgt cgcccttctg
     4261 gcgtggtggc tgtggccccg gaacgacgcc ggcagcagcg acggtgcgcc ggtcaagacg
     4321 gtgccggtac gcgtggcgcg cgccagcgcc gagccgctgg cgctgcgctt gaaggcggtc
     4381 ggtacggtca ccccgctgca cagcgtggtg gtacgcagcc gtgtggatgg cgagctgctg
     4441 cgcctgcact tccaggaagg ccagcaggtc aaagcaggcg acctgctggc acagatcgat
     4501 ccacgcccgt atgaggtgaa gctggcacag gcccagggta cccagcagca gaacctggcc
     4561 gagctggaga acgccgaacg ccaactgcag cgctaccgcg aactgcagaa gcagaactac
     4621 gtatccgggc aggaactgag cgaccagcag agcaaggtgc gccagctgca aggccgccgc
     4681 ctcagcgacc aggcctcagt tgacgaagcc cgactgcagc tgcagtacac ccgcatcacc
     4741 gcaccggtca gtggccgcgt cgggctgcgc cggttggacg tgggcaacct ggtgcgctcc
     4801 agcgatgccg aaggcctggt gacgctggcg cagaccgcgc cgatcagcgt gctgttcacc
     4861 gtgcccgaac ctgagctgcc cgcgctgctc gatgccgtgc aggcgcaacc ggcgctggca
     4921 gtggaaacct gggaccgcga agaacgccgg caactggccc gcggctcgct gtccagcgtc
     4981 gacaaccgca tcgataccac caccggcacg ctgaaactgc gtgcgcactt cgacaaccac
     5041 gatctggcgc tgttccccaa ccagttcgtc aacgtacgcc tgcggctggg cgagcagccc
     5101 gccctgctga ttcccgatgc cgccgtacag ttcggcagcc agggcaacta cgtgcatgtc
     5161 gtcggcaagg acaacaaggc gcagcgccgc aacgtggtgc ttgggcctgc cgatgacggc
     5221 cgcgtggccg tgcgctcggg gctggctgcg ggcgatcagg tggtgatcga aggcatcgac
     5281 ggactggaag acggaacggc ggtggagatc atcgccgagg aggccgcgac cagggctgac
     5341 acatgaatct ctcgcgcgcg ttcatcctgc gtccggtcgc caccacgctg ctgatggtgg
     5401 cgctgctgct gtcgggcatg ctggcctatc gcctgctgcc ggtggcggca ctgccgcagg
     5461 tcgattaccc gatcatccag atcaccacgt tgtaccccgg tgccagcccg gaactgacca
     5521 cacgcaccat caccgcgccg ctggagcgcc agctcgggca gatccccggc ctgaagcaac
     5581 tatcgtcgac cagttccggc ggcgcgtcgg tcatcaccct gcagttcggg ctggaggtgt
     5641 cgctgggcgt ggccgaacag gacgtgcagg ccgcgatcaa tgcggcaggg agcttcctgc
     5701 ccggcgacct gccggtgcca cctgtctacc gcaaggtcaa tccagccgat acgccgatcc
     5761 tgaccttggc agtgacctca caaggcctgt cactgccgca ggtgcacgat ctggtggata
     5821 cgcgcattgc ccagcgcctg gcgcagttgc ccggcgtcgg cctggtcagc ctggccggtg
     5881 gccaacgccc ggccgtgcgc atccaggcca atccggcggc actggccgcc aacgacctgg
     5941 gcatggacca catccgcact gccatcgccg ccgccaacgt caacctgccc aagggcagct
     6001 tcgatggccc gatccgcgcg gtgatgctcg acgccaacga tcagatgcgc agcgtggccg
     6061 aataccgcgc gctggtattg gcctggcgcg acggcgcgcc gctgcggctg ggcgatgtcg
     6121 ccaccatcac cgatgacgca gagaaccgcc agctggccgc gtggagcggc accacgccgg
     6181 cggtgctggt gaacatccag cgccagcccg gcgccaacgt gatcgccgtg gtcgaacagg
     6241 tacgtacgct gctgccgcag ctgcaggcca cgctgccggc cggtgtgcag atgaatgtac
     6301 tgagcgaccg cactgaatcg atccgcgcgt cggtgcgcgg cgtgcagaag gaactggtgc
     6361 tggccattgg cctggtggtg ctggtcacct gggtgttcct gcgaaatctg ccggccaccc
     6421 tcattcccag cgtagcggtg ccactgtcgc tcatcgggac tttcgcggtg atgctgctgg
     6481 ccggctattc gctcaacaac ctcacgctga tggcgctgac catcgctacc ggcttcgtgg
     6541 tggacgatgc catcgtgatg ctggagaaca tcgcccgcca tctggaggaa ggtgaaagcc
     6601 cacgcgatgc agcgctgaaa ggcgcaaccg agatcggctt caccctggtg tcgctgaccg
     6661 tttcgctgat cgcggtgctg atcccgctgc tgttcatggc cgacctggtg ggcgcgctgt
     6721 tccatgagtt cgcagtgacg ctggcggtgg ccatcggcat ttcgctgctg gtctcgctga
     6781 ccttgacgcc aatgctgtgc gcgcgcttcc tgaagccgca tgcgaagacc gcgcatgcac
     6841 ccgatgtctt cgaccgcgtc atcgccctct acgaccgaca gctgcgctgg gtgctgcagc
     6901 gccagccgct gatgctgctg gccaccgttg ccaccctcgc actcaccgtg gcgctgtact
     6961 tcgccgtgcc caagggcttc ttcccggtgc aggattccgg cctggtgcag ggcatcagcg
     7021 aagcgccgca ggcgatctcg ttccaggcca tgcacgagcg ccagcaggcg ctggccgcgg
     7081 ccatcgaagc ggacgaggcg gtggccagcg tgtcgtccta catcggcgtg gacggcaaca
     7141 acgccacgct caacaccggg cgcctgctga tcgagctgaa gccgcatggc gaccgcgatg
     7201 gcgctgcggt ggtgatggca cgcctgcagc agcgcgtggc gaagattccg ggcatcaccc
     7261 tgtacctgca gccggtgcag gagctgggca tcgaggaccg catcagccgc aatcaatacc
     7321 agttcaccct gaccacgccg gacctggaaa cgctggaaat ctggacaccg aagctgcttc
     7381 aggccttgcg ccagtcgcct gcgatgcgtg atgtcgccag cgatctgcag atgcaggggc
     7441 ggcaggcgcg cgtggcgatc gaccgcgatg cggcggcgcg cctgggcgta agcgtggaag
     7501 cggtagccga tgccctgtac gacgcctatg gacagcgcca gatttcaacc atcttcaccc
     7561 aggccagcca ataccgggtg gtactggaag ccgatccggc gcgccaatcg ggaccggagg
     7621 ccatcaccgg cctgcgcgtg cgcaacagcg ccgggcagac cgtgccgctg ggcgcgatag
     7681 cacgggtgga ggtgggaccc tctgcgctgc tgcgcaatca cgtgggccag ttcccagcgg
     7741 ccacgctatc gttcaatctt gccccgggcg catcgctggg cgaagcggtg gaggccgtgc
     7801 acgccgcgcg cgcacaggtg aacctgccgc agagcatcga acttcgcctg cagggcgcgg
     7861 cggcggcctt cagcagctcg ctgtcgtcca cgttgtggct gatcctggct gccgtggtgg
     7921 tgatgtacat cgtgctgggc gtgctctacg agagcttcat acatcccatc accatcctgt
     7981 ccaccctgcc ctcggccacc gtcggtgcgc tggctgcgct gtgggcaagc ggacgcagcc
     8041 tggacctgat cgcggtgatc ggcatcgtgc tgctgatcgg gctggtgaag aagaacgcga
     8101 tcatgatgat cgacttcgcg ctggacgcgc agcgcacacg cggcatgcca ccgcgcgagg
     8161 cgatccacca ggccgcgctg ctgcgcttcc ggccgatcct gatgaccacg ctggccgcgc
     8221 tgttcggcgc agtgccgctg atgctggcca gtggttcggg tgccgaactg aggcaaccgc
     8281 tgggctgggt gatggtcggc ggcctgctgg tcagccaggt gctgaccctg ttcaccacgc
     8341 cggtgatcta cctggccttt gatcgcctgc agcgtggccg tgcagcgtcc ccggtggtcg
     8401 ttgacgaggc gcgcgcgtga ccaccatcgc gcgcttggcg caggcctgcg tgcagcgccc
     8461 ggttgcgacg atcctgctgg cggtggcgct ggtgctggcc ggcctgctgg cattgcgcct
     8521 gttgccggtg gcaccgctgc cgcaggtgga ttacccggcc attgaagtca gcgccagcct
     8581 acccggcgcc tcgcccgaat cgatggctgc caccgtggcc acaccactgg agcgtgcact
     8641 gggcagcctg cccggcatct cacgcatcga ctcggccagc acccagggcc agacccagat
     8701 cgaattgaag ttcgtgctcg gccgcgacat cgatgaagcg gcacgtgaag tgcaggccgc
     8761 catcaacctt gcacgtgggc agctgcccag tggcatgccc ggcatgccgc agtaccgcaa
     8821 ggtgaatcct tcgcaggcgc ctatccttgc gctggcgctg acttcgggta cgttgtcgcc
     8881 cggccagctg tatgacctgg cctccaccgt gctggcgcag aagctgtcgc aggtaccggg
     8941 cgtgggtgaa gtgcaggtgg ggggcagtgc cttgcccgcc gtacgtgtat cgctggaccc
     9001 gaatgcattg aaccatgcag gcctggcgct tgaggacgtg gcccaggcca tcgcgcgtgc
     9061 caatgcggtg cgcccgctgg gcgcggtggg ggacgagcgc cagctgtggc agctggaagc
     9121 gccgctgcag ctacgccagg ccgcgcagta ccgcgaactg gcgttgaagt tcagcgacga
     9181 ccgcacgctg cggctgggcg atgtcgccgc cgttgccgac ggggtggaag accgttacgc
     9241 cagcggcttc cacaatgaac gccccgccgt gctgctgatc gtcagccgcc agcccggcgc
     9301 caacatcatc gccaccgtcg atgccatcca ggcgcagctg ccgcagctgc acgcgctgct
     9361 gccggccaac gtcgacatgc ggctggtgat ggaccgctcg ccggtcatcc gcgccaccct
     9421 gcacgaggcc gaactgaccc tggtgctggc catcgccctg gtggtgctgg tggtgcttgg
     9481 cttcctcggc cactggcgcg cggcgctggt gcccagcgtg gccatcccgg tggtgctgtt
     9541 cggcacgctg gcgctggtgg cgttgatggg cttctcgctc aacacgcttt cgctgatggc
     9601 actgatcgta gccgcggtgc tggtggtgga cgatgccatc gtggtgctgg aaaacatcgc
     9661 gcgtcaccgc gaattgggcg ccgaccgctg gcaggccgcg gtgcgtggcg cgtccgaagt
     9721 gggcgccacc ctgctgtcga tgaacgtggc gctggcggtg gtgttcgtct ccatcctgtt
     9781 cctggatgat ttcgtcgagc gcctgttccg cgaattctcg ctgaccctgg tggcggcgat
     9841 gagcgtgtcg gtggtcgttg cgctcagtct ggtgccgatg ctgtgcgcgc gcctgttcgt
     9901 cgatgacgcg cagcacgcct cacgctggca gcgtggcagc aacgcgctgt tcgagcgcgt
     9961 gcgtgaggcc tacctgcgca cgctgcaggc ctgcctgcgc cggctgcgct ggccgctgct
    10021 ggccttcgtg gcggtcatcg cgctcaacgc ctggctgttc cagcaggtgc ccaagggcgt
    10081 ggtgcccaag caggacaccg cgcagctgcg tggcttcgcc cgtggcgacg atggcctctc
    10141 gttccaagcc atgcagccga agatcgatgc ctaccgcacg ctgctgctgt ccgacccggc
    10201 catcgaggac atcatcggct acatcggtgg cagcaacggg gtcaacaacg ccttcatcat
    10261 gatcaagatg aagccgctgg ccgagcgcaa ggtgtccagc caggaggtga tcgaccgcct
    10321 gcgcgcgcgc ctgcccaaac tgcccggcgg caacctgtac ctgtgggtgg accaggacat
    10381 ccgcttggaa ggcggcggca gcagcggcca gtacgagttc cagctgctgt cggcggacat
    10441 ggcgccgctg cgcgagtggg cgccgaaggt cggcgccgcg ctgcgcgccc tgcccgagct
    10501 ggtggacgtg gaagcacagg gcgaggccgg catgcgccag gtggtgctgg acatcgaccg
    10561 cgaggccgcc gcgcgccatg gcgtggacct gaagaccgtg gccaacatgc tcaacaactc
    10621 cttcagccag cgccaggtcg ccaccctgta cgacagcctc aaccagtacc gcgtggtgat
    10681 ggagctggac ccgaagcaca cccaggaccc aggcaccctg gcgcgcctgc aggtgatcga
    10741 tggcagtggc cagcgcattc cgctgtcgac catcgccagc tggcgctacg gcatggcgcc
    10801 ggaccgcatc taccacagcg agcagttcgc ctcgatctgg atccagttct cgctggcgcc
    10861 gggcgtgggc ctggaacagg ccacgcaggc gatcaatgcc gcgatggcga aactgatgct
    10921 gcctcgtacg gtgcaggcca agctgtccgg tgaagccggt ggcctggaca gcctgcgcgc
    10981 gcggcagttg tggctggtgc tgggcgccac cctggcggtc tacctggtgc tggggattct
    11041 ctatgagagc ttcctgcagc cgctggtgat tctgtccacc ctgccctcgg ccggcatcgg
    11101 cgcgctgctg gcgctgtggg tgttcggcaa cgaactgaac ctgatcgcgt tgctggggtt
    11161 gttcctgctg gtgggcgtgg tgatgaagaa caccatcctg ctggtcgatt tcgccctggc
    11221 cggtgagcga cgtggcttga gtgcgcagga tgcggtgatg gacgcggcac gattgcgcct
    11281 gcggccgatc ctgatgacct cgctggcggc gctgctgggc accctgccgc tgatgctggc
    11341 caatggcgag ggctgggagc tgcggcagcc gctgggcatc gcgatcgtgg gcgggttgct
    11401 ggtcagccag tggctgacgc tgtacacgac gccggcgatg tacctggcgt tggcgagggt
    11461 gcggaaaaag aaggccatgt agagtcgagc catgctcgac cgggatcggc cgtcagtggc
    11521 gcacgacgaa cccgccggac cgaccgctgg agggcgcctg caactcctcg ttgaaggcgg
    11581 ccttgatggc ctcgatcgcc acgtcacggt ccatgccgtg gctggtcgcc agcgcgtcgg
    11641 ctacgtgctg ggcaacatcg gccagaatgc gcccccaggc acgttcctcg cggataccgg
    11701 ggcgatcatc atacataccc accttcagtg atgtgtgcag cccacgctcg gcgatccaca
    11761 cacggatcat ctcgacggac gattcgtcgc gctgtgcagc gtcagggatg atcaattcgt
    11821 tcatggcggc agccgcaagg acaggatgcc gcattgtggc gcacatccac gcgtggcgtg
    11881 gatctactgc gtcagtcgag cgtggctcga ctctacaaaa accgatatca ccaccccggc
    11941 gatgtacctg gcgctgtcgc acttacgcag cgccaggcgc atcgccggtg cggacgggtc
    12001 ggcctccaac tccgaccgac cctgatcgcg gccgcacccc cgcaggcgct ggccgccatc
    12061 cacacacgtg ccgcaatcaa gcggcttcag acacctttac ttcacgacgg gcgcgcacgg
    12121 ccgcagccag tcgctccagc accgtcacgg tggtgtccca gtcgatgcag ccatcggtga
    12181 tgctctgccc gtagaccagc ggctggccct ccaccagttc ctggcggcca ccgaccagat
    12241 ggctctcgat catcacacca acgatgcgct gttcgccgtc ttccaactga acggcgatgt
    12301 cctcgatcac cttcggctgg ttgtccgggt tcttcaggct gttggcgtgg ctggcgtcga
    12361 tcatcaggcg ggtcggcagc ttggccttgg ccagcgcctg gcaggcctcg gcaacactgc
    12421 ctgcgtcgta gttcggctgc ttgccgccgc gcaggatcac atggcagtcc ggattgccgg
    12481 tggtcgagac gatggcggtg ccgccctgct tggtgaccga caggaaatga tgcggattgg
    12541 aggcagcccc caccgcgtca gcagcgatct tgacgttgcc atcggtgccg ttcttgaagc
    12601 cgaccgggca cgacagcccc gaggccagtt cgcggtgcac ctggctttcg gtggtgcgcg
    12661 caccaatcgc gccccaggcc accaggtcgg cgatgtactg cggcgagatc acatcgagga
    12721 attcgacacc ggccggcagg ccaagcttgt tgatgtcgcg cagcaggccg cgggcgatgc
    12781 gcaggccctt gtcgatcctg aagctgccgt ccaggtcggg gtcgttgatc aggcccttcc
    12841 agcccaccgt ggtgcgcggc ttctcgaagt acacgcgcat gacgatttcc agttcgccgg
    12901 ccagcgcatc gcgcagtggc ttcaggcgct gggcgtactc gatggccgca tgcggatcgt
    12961 ggatcgagca cgggccgacc accaccgcca ggcggtcatc acggccgtgc aggatctggt
    13021 gcagggccgc gcgcgaggcg ctgacggtgt cggaggcttc atcgtcacac ggcagcatcg
    13081 ccagcagctg ggcaggcggt gtcagcggtt cgatggtgcg gatacgcagg tcgtcggtgt
    13141 gcgggggcat tgcggggggt ctccggaacg ttgggggtcc ccagcgtggc ggcatgaaaa
    13201 aagccgccag gttcgctggc ggctttcggg aatgcgtctg aagctttctt cagggtgagc
    13261 gcagtccttc ctccgccaga ggcttcggaa agtaatacca gtaaaagcgg gtagcggctg
    13321 cgttcatggg atgtattgat agcacagctt ttgcgcagtg caaaatgttt catccgcaac
    13381 tggggacgcg gttcagcgag gtgcgcgccg gcccggccca tgcggcggca accacgcgaa
    13441 gtcgatcatc tgccatgcac ttccacatcc agcagcaggc cttcatggat gtcggcccag
    13501 cgttccagca cgcgacccag ctcctgcctg gcctcgtcca gctgctcggg gttgagcagc
    13561 gagcgcgcgg tgtagagatc ggagaccagc cgccgcagca ccgcttcggg aatggccacc
    13621 gacggcccct cctgttccgg cagctgcaac gccggggttt cacccagagg gccgaacagc
    13681 gtgacctgga gcgtgctctg catgatcaac ttccctgcgg acggacatgg gcaatgcact
    13741 gtttaccgtg tctgggtgac aggcgcatgt gccatgcccg cttgaatggc cggggctagc
    13801 cggtcagcgg ccggcactac cgcagcgaac gcagtgcgcg cttgcggatg taggcgttgg
    13861 cggcaccggg gtgctcgtgc tgccagcgca cgcacaggtc acgcagccac tgcggctgcg
    13921 tcttgccggc atcgttgagc caattgccga ccgagtcctg cacatagcgt tcagggtcgt
    13981 cggccagtgc ttccagcaac ggcaatgcct gttgcggatg ctgcttgaac ggcgcgatgt
    14041 gcgtggccca cacgccgcgc ggacgcagtg cttcgcaggc gaaccggcgc aggtagggtg
    14101 atgtttcctg tgtccacggt tgcaggtgct caagcgcctg cagcggcgcg gtaacaatgt
    14161 ccgcgcgcag cgccagccac gcccattcgc gcacaccgaa gtgcgggtca tcggccagcg
    14221 tgcgcatctg ctgcagcttc tctgccaggg ttgcgcggga atcactgccg atcaggtagc
    14281 aggcccagcc gcgcacggta tcggagttgt gatactgcca gagcgcaggc gcgccctgcc
    14341 ccgcctcacg cagcagttgc gcggccaggg ccatgcgctg ggtgatgccc ttgcctgagg
    14401 cgtcccgcat gcgctgcagc gctgccggtt caagcgacgg cgccacgcac cgcagcaact
    14461 caccgaagtc caccgccagg cactcggcca gatgggtcgt cgcaacgcgg ccgctgttga
    14521 gcgcgtgctg gcgttgcgtg gtcaccgcac tcatgccccg ctcccgcgcc cggcgtcggt
    14581 gtgcagccag accttgtgca gcagctgcga aagctgctgc tgctcggacg catccaggcc
    14641 atcgaacagg ccaccgatcc acagcgtatg ccgttcgaat agtgtttccg ccaggcgcgt
    14701 gcctttcgcg gtcagtacga tctgcaggcg gcggccatcc tcggcatcac tgcgacgctg
    14761 cagcaggcct tcgcgctgca ggccatcaag caggccgctg atggtggcgc gggtgacgcc
    14821 cgcgcgctct gccagcgcat gcggcggcag cgtgccaccg gcaccgtgca gcaggaacag
    14881 cacgatgaag cggccttcgc tgagcccatg tggcgccagc cggctggcgc agtcgtgatc
    14941 gatcgccgaa gacaacgaca gcaactggaa gcacagccgc agcagggcga cattgctgtg
    15001 gccacgtcgc tgcgcttcct ccagcagggc atggtgcttg gcttcgatca tcggccgcat
    15061 gattatgatt agtcagctaa tcataatatg aaaataacgt cagggtcgat caagtgttga
    15121 tgtcaggagt gctttgccag cagcagccgg gcgatcagtc cgccgccttc gcggggcagc
    15181 agcagcagct cgccaccatg ccgtcgcgcg acgttggcag cgaccgccag gcccagcccg
    15241 gtcccaccgg tagtgcggct gcgtgagccc tcgctgcgct ggaagggcag cagcaggcgc
    15301 gcgcggtcgg cctggtcgac gccggggccg cgatccatca cgtccagctg caccacgttg
    15361 ccggacaggg cggcctgcag ctgtaccgcc cccgcgtagc gatcagcgtt gtcgatgaga
    15421 ttgtcgatcg cccgccgcag caacagcgcg tccccctgcc acgacagcgc atccggtccg
    15481 tcgagggaga tatcgacgcc gcgcagcagc gcgctctgca cgcattcctc cagcagcgcg
    15541 gccaggtcga gtgggcgcat ctgcaatggc tgcagctcgc cacgcgcata gtcgaggacc
    15601 tgctcgatca tcgtgtccat gcgctcgatg tcggccacca tccgcgccgc ctgttgtggt
    15661 ggcgcgaact ccgcacgcag gcgcaggccg gtcaacggtg tgcgcagatc gtgcgcgacg
    15721 gcggcgagca tgcgggtcat ctcctgcgcc tgttcgtgca accgctcgcg cccggcgctg
    15781 atcgcgcggg ccagtacctg cacctcgcgt gggccgtcgt ccggaagcgg tgtgctggcc
    15841 tgcaggtcca cgttggcgct ggcctcggcc agccgccgca ggggccggcc aaggcggatc
    15901 gcggcccatg cagccagcgg tgccagcagc acggttcccg tcaccagcgc cagcacgacc
    15961 tgccggcgcc acgctgccag atcgctgtgg tcgctgccta ccacctgcca tcgaccatca
    16021 gcccggcgca cggccagttc gaacggcgtc cactgcattg cggtcagcac cgcgacctgc
    16081 gcctgcaatg cgtccgcacg cgctttggcg tcgagcacgg cgccgccttc gatgacctgc
    16141 acctccgggg ccttgccgcg gctgctccag accagcttta cgtgctccag cggctggccc
    16201 agctgcgtgg ccaccagctg ggtgagccag tcattgctga ggccctcggg tggagacatg
    16261 cgggtttcca ggtgcaggcc caacatcgcg gcggagcgtt caccccgcaa cacctgcatg
    16321 gcctggtcca gccgcatcgg cggcggcggc ggtcgcggca tccagcccac caccgccacg
    16381 ctgaccaggg tggccagcag caggctggcc agggccagca tcccgaccca gcgcgcggtg
    16441 gaccagcgcg ccctcacagc acctccacct cggcgtcgaa gcgatagcct tcgccgcgca
    16501 gcgtctgcac caatgcctct gcgccgggtg ccgcctggcc cagcctgcgg cgcaggcggc
    16561 tgatcgccag gtcgacagca cggtcgacgc tctcgctgtc ctcgccccgg gtcaacgaca
    16621 gcagctgctc gcgtcccagc accctccctg cgcgctcggc gagcgccaac aacagggcaa
    16681 attcgccgcg gctgagcgcc agctcgttgc catcgggcgc aagcaggcgg cgttgctcgg
    16741 gaaacaatcg ccagccgcag aaacgcagct cgctggccac ctggatgcgc agcttgtcct
    16801 gccggcgcag cagtgcccgc acccgcgcca gcagttcgcg tggatcgaaa ggtttggcca
    16861 gatagtcatc ggcccccatt tccagaccga tcacgcgatc cggtgcggtg cccatcgccg
    16921 acagcatcag gatcgggatg gcgcgtgcct gcagccggcg gcacaccgac aggccatcct
    16981 cgcccggcat catccagtcc aggatgatcg cgtccggccg ctcgctctgc agcagcacat
    17041 ccaacgccgc ggcgtcggcg gccacacgca cctggtagcc gtgcagcatc aggcagtcgg
    17101 caatggcatc acggatgctg gcatcgtcat cgacaacgat gacccgggcg ggagtgttca
    17161 tgcggccagt atcgtgcagg tgtgtatcag gacggtatca acgccgatat tcccgcgata
    17221 cgccgatgcg cgccaatggg cctccccatt caacccagga gacttcccgt gcgcctcgcc
    17281 ctgttgcccc tgcttgccgc cgccttcccc acgctggccg ccgacacccc cgaacatgtg
    17341 ctgccgatgt ggatgcaggg cgggcacccg acggtggcgc tttcgctgga cggccgggcc
    17401 gaaccgctgc gcttcgtggt cgacagtgcg gccggcgcca cgctggtcga tgggcgcgtg
    17461 gtacgccgtt acggcctggt cgatggcacg gccgaggttt cgatcgccca aggcgccagt
    17521 acctcgggcg cgcagctgcg gcgcacgcgc accaccacct ggcagctcgg cagctggcag
    17581 ctgcaggcca gcgcactgca ggccgatctg gcgtcgctga ccaagggcga cgaccccgcc
    17641 atcgacggct tggtcggcaa tgacctgacc gcacgctggg acacccgttg ggacttcgtt
    17701 cgaggtgagc tgtcgctgtc gagaaccggc accctccact tcgacgatga cagctgccag
    17761 gccaatgcac tgccggaccg cgccgagggc ctgcgcgatt tcggattcat caccctcacc
    17821 ttcggcggaa cgaacatcgc tgccgttgcc gtggtcgata ccggcgctgc gcagaccgta
    17881 ctcaacgatg ccgccgcgcg cgccctggga ttgcgcaccg atggcagcga tccgcgcgtg
    17941 cgcgtacgca gcaagggcac cgaaggcctg ggcggaaagc cgcacccgac ctggctgtat
    18001 accctgcccg gcctgcgcag cgacggttgg cagcacccgg ccatggaggt caggatcagt
    18061 gagctgccgg tgttcaaggc catcggattg gacaagcgcc ccgcgctgat cctgggcgcc
    18121 gatgccatgc gcggtggcca ggtcgacatc agcacaggcg cggcgcggat ctgcctgcgc
    18181 cgcccgaccg ccagctgagg ccaggccatg acgccggcgg cgggctggcg tagcatcgcg
    18241 ccacgtcctg ccaggaggtc cacgcatgcg ccgtgctgcc ctgttgttgc tgacgctgtt
    18301 gccgctggcc gtactggccg caccaccccc ggtaccctcg ccggcccgca tcgatgccga
    18361 agcgcagcgg ctgatgcggg ccgcacaggc gcgtggcatg gcgctggcgg tgatcgatgg
    18421 cggcaaggtg gtgcacgtgg ccgcctatgg cgaacgcaat gccgcaggcg agccgctgcg
    18481 caccgacacc gtgatgtacg ccgcctcgct gaccaagatg gcgttcggtc atctggtcgc
    18541 acagctggca caggatgcgc ggatcgggct ggacgccagc atcgccacag cactggacaa
    18601 gccgctgccg gactacccgc ccgagccaaa gaagtacgcc gactacagcg tgctggccga
    18661 tgatccgcgc tggcgccagc tcaccccgcg cctgctgctc aaccacgcca gtggctttgc
    18721 caacttcggg ttcctcgaac cggacggccg gctgaagttc cacttcgatc cgggcagccg
    18781 ctatggctat tccggcgaag ggttgatcct gctgcagttc gtgatcgaac gcgggcggcc
    18841 gggcgaggat gtgggcgcgt tgatgcagca gcgggtgttc gaccgcttcg gcatgacccg
    18901 caccagcatg atgtggcgcg aggatttcgc cggcaatctg gccgatggct ggaccgcgca
    18961 gggcgccgcc gagccgcacg atgagcgcag ccgcgtgcgc gcggccggct cgatggatac
    19021 caccatcggc gacatggccc gcttcgccgc cggctatgtg cgtggcgacg ggctgtctgc
    19081 atcgatgcgc agggagctgg tgcggccgca gctgccgatc accactgcca gccagttccc
    19141 caccctgcag ccggagctgc cgcctgcaca acggcaccgg gacctggcgg cggggctggg
    19201 cgtggtgacc ttccagggcc cgcagggtgc cggcttctac aagggcggcc atgatgatgc
    19261 ggtgggcaat acgctggtgt gcatcgaaca gggccagcgc tgcgtggtga tcctgggcaa
    19321 cgatgtacgt gccgaggcgg cgttcccggc gttggtgcgc ttcgtgctgg gtgaaaccgg
    19381 cgcgccctgg gaatgggagt acggggcgaa gaagccgttc gtgcgttgac tgcatcgccc
    19441 accacgccca caaaaaaaac cccgccttgc ggcggggttc ttcattgctt cgggaatgcg
    19501 tggacttaga agtccatgcc gcccatgcca cccatgccgc ccatgccacc ggcgccaccc
    19561 atggccggct cgtccttctt cggagcttca gcaaccatgg cttcggtggt gatcatcagg
    19621 ccagcgatcg aggcagcgtt ctgcagcgcc gaacgggtca ccttggtcgg gtccaggatg
    19681 ccgaactgca gcatgtcgcc gaactcgccg gtggcggcgt tgtagccgaa gctgccggtg
    19741 ccttccttga ccttgttgat gatgaccgac ggttcttcac cggcgttggc gacgatttcg
    19801 cgcagcgggg cttccatcgc acgcagggcg atctggatgc cgtggttctg gtcttcgttg
    19861 gcgcccttca ggccagccag cgaggtgacc gcacgcacca gggcaacgcc gccgcccggg
    19921 accacgcctt cttcaacggc tgcacgggtg gcgtgcaggg cgtcgtcgac gcgatccttc
    19981 ttttccttca tttcgatttc ggtcgaggcg ccaaccttga tcacggcaac gccgccggcc
    20041 agcttggcca cgcgttcctg cagcttctcg cgatcgtagt cggaggaggt gtcctggatc
    20101 tgggtcttga tctggccgac gcgtgcgtcg acggcagcct tgtcacccac gccatcgatg
    20161 atggtggtgt tttccttgga aacctgcacc ttcttggcgc ggcccaggtc cttgatggtg
    20221 gccttctcca gcgacaggcc cacttcttcg gagatcacgg taccgccggt cagcacggcc
    20281 atgtcttcca gcatcgcctt gcgacggtcg ccgaagcccg gtgccttgac ggccacgacc
    20341 ttgacgatgc cacggatggt gttgaccacc agggtcgcca gcgcttcgcc ttcgacttct
    20401 tcggcaacga tcagcagcgg cttgccggcc ttggcgacgc cttccagcac cggcagcagg
    20461 tcacggacgt tggagatctt cttgtcgtgc agcaggatga acgggtcatc caggtcagcg
    20521 gtctgcgact gctggttgtt gatgaagtac ggggacaggt agccgcggtc gaactgcatg
    20581 cccttgacca cgtccagctc gttgtccagg cccgagcctt cttcaacggt gatcacgcct
    20641 tccttgccga cttccttcat cgcgtcagcg atgatctggc cgatcgactc gtccgagttg
    20701 gccgagatgg taccgacctg ggcgatcgcc ttgtcgtcgg cggtcggctt ggagatgttc
    20761 ttcagctcgg caacggcggc cacgacggcc ttgtcgatac cacgcttgag gtccatcggg
    20821 ttcatgccgg cggcaacggc cttggcacct tcgcggatca gggcctgggc cagcacggtg
    20881 gcggtggtgg tgccgtcgcc ggcgtcgtcg ttggtgcgcg aagcaacttc cttcaccatc
    20941 tgcgcgccca tgttctcgaa cttgtcagcc agttcgattt ccttggcgac ggagacgccg
    21001 tccttggtga tggtcggagc gccgaagctc ttttccagca cgacgttgcg gcccttcggg
    21061 cccagggtgg ccttgacggc attggcgaga acgttgacgc cgcgcaccat gcgcgaacgg
    21121 gcgtcttcac cgaaacgaat atccttggca gccattgcga ttacctcgat gtttgcgccg
    21181 ggccgggccc ggcgacgaaa ggggatgtct tacaggaaag caggtcgcgc cgaggctcag
    21241 ccgatgacgg cgagcacgtc gtcttcgcgc aggaccttgt actcgacgcc ttcgctcttg
    21301 tacgagctgc cggcgtactg gccgtagatg accttgtcgc caaccttcag cgacggcgcg
    21361 cgcacgctgc cgttgtccag cggcttgccc gggccgacgg ccacgacttc acccttggtg
    21421 gacttttcct tggccgaatc cggaatgacg atgccaccgg cggagatttc gtcggcttcg
    21481 atcggcttga ccacaacgcg gtcgtgcagc ggcttgatgc tcatgagaga cctcttaagt
    21541 tattgattgg tctgaaaaag tctggcgatg ttagcactca ccccaggtga ctgccagcat
    21601 tgctcgcgaa aaagcccgac gaatcgggag caggacagag atggagctgc cccagggcct
    21661 ttcaaggccg ccgccggaaa aaatttcatc gtgccggagc cggacaccca cgtccgcgtg
    21721 aagactgcgc gtcgcgtgcg gtgcggcatc cccacagggg aatcctcgac atttggtgat
    21781 ccgcgtcgca ctgtcagata tctgacgttc atttacgaca aagtgtcact ggatcggcct
    21841 taggctcggc cgcgcattcc caatcacaag gagtagtcga tgcgattgct gtccccgctt
    21901 gccgccgcct gcctgctggc gctggccgcc gcgccggccc aggccgaggt cttcatcaac
    21961 gaactgcact acgacgacag caccccggcc ggtgacgtcg gcgaagcgat cgaggtcgtg
    22021 gccacggccg gcgaggacct gtccggctac cgcctgtacc tgtacaacgg cgccaacgcc
    22081 tcggccgcgg tggtctacgc caacaacccg gtgccggccg gcaccgccgc cggctgcggc
    22141 agcgccacca tcgcggtggt caactacccg accaacggcc tccagaacgg cccgaacgac
    22201 ggcatcgccc tggtcgatgc cagcggcaag gtggtccagt tcctcagcta tgagggcgcc
    22261 atcaccgctt ccggtggccc cgctgccggg atgaccagcc agaacattcc ggtggccgag
    22321 accaacagca cggcgccggg cacctcgctg cagctgaccg gcagcggcag ccagtacgcg
    22381 cacttcacct gggccgagtc ggccagacag acattcggca gctgcaacaa cggccagacc
    22441 ttcagcggcg gtggcacccc gggcccgaac acgccgccgt cggtgtccac caccaccccg
    22501 gcgcagggca gcaccacctt cccggccgcc gccgatctgg aagtggtgtt cagcgagacg
    22561 gtgaacctgg ccagcggtgc cttcgcgctg agctgtggca cctccggcag cgtgccgctg
    22621 accttcccgg ccagcggacg cagcgtgaag ctgtccacca acaccgcgct ggtggccggc
    22681 gaggcctgcc gcttcgacat ccgcgccggg cgcatcaccg acctgcaggg cgcgcatccg
    22741 gccgccgaca gccgcatcgc cttcaccgtg gccagcaccg gcggcaatcc cgacccgggc
    22801 aacccgggcg tgccggccgg ctactacgcg aaggtgaaca cctccagccc cagccagctg
    22861 cgctgctcgc tgcatgccac catcaagggc cataccgcgt acccgtacag cggctcgggc
    22921 accagcacct ggaccatcct ggagattgcc gacgaggatc cgaacaacag cggcaggatc
    22981 ctggatgcgt accgcaaccg cagctacgcc aaggtgaccg atcgcgccgg cagcggcagt
    23041 ggcctgaagt acaaccgcga gcacacctgg ccgaactcgc tgggctttgc cagcaccacc
    23101 ggtgacaagg gcctgccgta tgcgccctac accgacaccc acatgctgta cctgaccgac
    23161 gcgcagtgga acgccgaccg tggcaacaag ccgttcgcca agtgcgacgc caactgcggc
    23221 gagcgcgcca ccgaagccaa caacggccag ggcggtggca gcggcggcta ccccggcaat
    23281 tccaactggg tgcgcacgcc ggacggcaac gccggcacct tcgaggtgtg gggcaagcgc
    23341 aagggcgaca tggcgcgtgc agtgatgtac atggcgatcc gctacgaggg cggcaaggat
    23401 gcggccaccg gccagtccga gccggacctg gagctgaccg acgaccgcag caagatcgtc
    23461 aagaccagca gctcgccggc ctacatgggc ctgctttcga cgctgatcga ttggcacctg
    23521 tccgacccgc cggatgacgc cgagcgctcg cgcaatgacg tgatctactc gttccagggc
    23581 aaccgcaacc cgttcatcga ccaccccgag tgggccaccc cggccctgtt cacctcggcc
    23641 aagccggcca cctgccagct ggccaactga ccgcgca
//
LOCUS       DAOKIP010000045        23649 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.045,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000045 DAOKIP010000000
VERSION     DAOKIP010000045.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 23649)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23649)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23649
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.045"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..2564)
                     /locus_tag="QEL58_001538"
     CDS             complement(<1..2564)
                     /locus_tag="QEL58_001538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005414634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing protein"
                     /protein_id="HDS1676018.1"
                     /translation="MSAVVPHLRSLRTHLARLRAASPGVLSSSVLSSNLLLWLQPHRL
                     SVANKLKATLWVCGLGLVAIAAVYAWTGHASAQAARNQASYQRGSDLAASLATRVAEA
                     RRLQTQYARSFDDADRNQLLATQKALQADLQALRAIPMDAGRRKALQVLTEAADAFSQ
                     GVAALFERVDEMGRGDAGLAAQLQQAADTLQAQVDALQRPLLALSLQKMRRQEALLLL
                     DGDSAHADRASEEKLPFDLALAGLSTDVQDALRSGMEAYQVALLGYTAARVGLDVEAQ
                     SLLDTAAGVAPALAAFQQAQVAALAEAQARQQAGTRAMSVLFALTLLLVAGVLITSLV
                     LVLRAVRQPIQDTLRFASDIADDRLDTTLRVYNANDEIGQLAQRLVDMQQRLRARIET
                     ERAVARGNTRVRQALDSAQTGLMVIDAEGLVAYANPALLQQLDLQADALVASEAVRLH
                     PALASLAGVRQREEREIGQDGVRYQLIANPITDEGQFLGVAVEWRSRALETLLETEVA
                     ALVDAAAHGDLHGRIVLDGKQGFVRTLSTSINRLLATFETNLGDLQALLAALARGDLS
                     VRMDGDLQGVFARMRDDANATVAQLGRIVTRIQQATSSLDTGVGEIVAGHHDLSQRTE
                     QQAANLEETAASMHELTDTVGRNADAAGRADALVKGAAAVAQRGGDAVGQVVATMHGI
                     SEASRRIGDITQLIDGIAFQTNILALNAAVEAARAGEQGRSFAVVAAEVRLLAQRSAE
                     AAKQIKGLIEDSVARVGQGNQQAEQAGTTMGEIVGSVQQLADLLAGIRSASQDQHAGI
                     AQVNQTIVQMEASTQRNASLVEEAGASTAQMQAQVHALAEAVGAFRLQPARQARAAA"
     gene            2768..3607
                     /locus_tag="QEL58_001539"
     CDS             2768..3607
                     /locus_tag="QEL58_001539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008264824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arylamine N-acetyltransferase"
                     /protein_id="HDS1676019.1"
                     /translation="MTTLDIPRYLQRLQLDAPPPLTLAGLSLLQQRHNALLPFETLSC
                     LLRDAVPIDLDSVQRKLLDERRGGYCFELNGGLLALLQALGFDAQPLSARVLLAAQDG
                     ELTARTHLLLRVHVEGEDWLVDAGFGSLTPTVPLRLHDTAPQATPHERYLLQRLGDDG
                     DFVLSAESSDGWRAMYRFDLQAPAPIDNVVGNWYVCTHPDSSFPGQLRASLTGPDWRR
                     TIGSGNYTEYRPGQAPDKRPLHDVGDVREVLQQHFGLQLPDDPRLDPAINDWLQRSRA
                     ATP"
     gene            complement(3670..4041)
                     /locus_tag="QEL58_001540"
     CDS             complement(3670..4041)
                     /locus_tag="QEL58_001540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005411235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HDS1676020.1"
                     /translation="MNPILHVEIPASDLARAIAFYQQWLQVVVDEPILLHDCHMAYLP
                     FSDDATGASLSLVQGADYQPSEQGARLYIGVDDLEASLDRALQAGAELRFGPADAGDW
                     RVAEIRDSEGNRIALQARAIL"
     gene            complement(4064..4702)
                     /locus_tag="QEL58_001541"
     CDS             complement(4064..4702)
                     /locus_tag="QEL58_001541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005414637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDS1676021.1"
                     /translation="MSGAAIRVALADDQALVRAGLRALLQGLGVEVVLEAEDGQALLD
                     ALATQPVDVVLSDIRMPGLDGIEALRQLRARGDATPLLLLTTFDESDLLLRASEAGAQ
                     GFLLKDAAPADLREAIERVAAGETLLMPVSTEPVRARYRFHDEAPPSDTFGEREVAIL
                     RLLAGGYSNKEIARSLFLAEGTVKNYVSAILDKLGTRDRTRAVLKAITLRII"
     gene            complement(4699..5799)
                     /locus_tag="QEL58_001542"
     CDS             complement(4699..5799)
                     /locus_tag="QEL58_001542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008267141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HDS1676022.1"
                     /translation="MPSLLRHLLRPLSLAGLVTVLVVGLSFAVQRGEAAPSLLLLAGF
                     LLLFVLHGWASMPSRVRAVAAVLQALLAIALVALQPRTGTAPVLLVVLVAQLAEHWPP
                     RFMLGVALLANLAMYAVLRHSGFSQPLLVVLLYGGFQAFAALTAHYARSTALARDDLA
                     RVNADLLATRALLADSARDAERLRLARELHDVAGHKLTAMRLNLRALAADPALAGRDG
                     LVLAEQLSGELLADIRQVVQSMRDDRGLDLATALHALAAPFPRPKLQLRIGEGVRVTD
                     PLMAETVLRLVQEALTNAARHGNAGTVWLAINEEESRLRIDIRDDGQRSERIREGNGI
                     AGMRERLAAVRGQLELARTAQGGMHLTAWLPA"
     gene            5961..6383
                     /locus_tag="QEL58_001543"
     CDS             5961..6383
                     /locus_tag="QEL58_001543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019338953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2141 domain-containing protein"
                     /protein_id="HDS1676023.1"
                     /translation="MIRTALLSTALTALALAGGAHAADLAVTVHDVRVQTGTLRVALV
                     DNATAWDGKAAPVQAQQARPSGDSARFVFKNVPAGSYAVLLTHDENDNGKLDTNLVGM
                     PVEGYGFSNNPQVMRKPTFDEARVNVPAAGAAIDITLR"
     gene            6410..7933
                     /locus_tag="QEL58_001544"
     CDS             6410..7933
                     /locus_tag="QEL58_001544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005411239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carotenoid oxygenase family protein"
                     /protein_id="HDS1676024.1"
                     /translation="MDRRRFLRTLLSSSACLALGATALRSAPAFAGDPAHFAQGLQEH
                     PWLLGWRSVSSESLGPATVQLQGRLPAGLAGTLYRNGPAWTERDGFRYDHWFDGDGMV
                     HGWRFNGDGSLTHHGRMVATPKFSREQKAGRFQYPAAGTSVPGALAVRNNDDANVANT
                     SVTMINGRLFALCESGSAFEVDPDSLQTLGPVTWRPDLAALPFSAHPLPDRDGSVWNF
                     GSISLMGGHGLLVWHIGKDGQLRSANVIETPEHGYLHAFAMTGQHLVFVLMPFDFTGT
                     GGSFFERMQFAPQRAARIAVVAKDAPDKAQWFEAPFAAIYHFGDAFTRDGGIVLRAVR
                     HDDINEARSPMKEAMAGDGAHAANSGASLVELHLDLRRGQARWESLGISAVEFPLFDP
                     RSANTRGARLYAPTIDGPANAPYFNAVAAFDIERGRRQLWHYGPDIMAEEHVFVPRPG
                     SRNADDGWLIGTLLDPVNTRSGLAVLDARHLDDGPIAQAWLPYAVPLGFHGTFAARG"
     gene            7995..8711
                     /locus_tag="QEL58_001545"
     CDS             7995..8711
                     /locus_tag="QEL58_001545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006397122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDS1676025.1"
                     /translation="MSLADHRNALAPQGFLRVAINLGNPVLAQGDARSPRGPTLELAT
                     ALAQRMAVQARFTCHDAAASVVAAANQDEWDLAFLAIDPARADRIAFSAPYVEIEGTY
                     LVRADSPAQRVADLDHDGLRIAVGRGAAYDLFLSRELRHARIERADTSAAAIDLFDQQ
                     HLDAAAGVRQPLEAWARSHPGHRVLADRFTVIQQAVAAPASRPADALRALFKEVQAIK
                     AGPLLGEAFARAGQAVTLVR"
     gene            complement(8764..11376)
                     /locus_tag="QEL58_001546"
     CDS             complement(8764..11376)
                     /locus_tag="QEL58_001546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008268452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDS1676026.1"
                     /translation="MSTLPTRHPLTLGLLALLHAPLAVQAASPVATDAAPTPSAVDLD
                     TVTVVGSIVSGEKQALDAQREASNLMNVVSADGIGKLPDHNAAEAVQRVPGVSIERDQ
                     GEGRFVAVRGLPAQWNSTTLNGDRLPTAEEETTSRATAFDFFPTELIERIEVSKTLTP
                     DREGDAIGGQVNFVTRTAPARRTFAASVAGNYNDKAVDTGTSANVLYGDRSADGRFGF
                     LINGTYWKRPWATDNFEPRRSADGLGIYRLELRDYTGERTTRGVNGGMEFLPADGHRL
                     YVRGQYGELSDDETHYKHRYRFDKDRVELQNIHNELITEFRTFEFGGQHTFGRGQVDW
                     KLASAENDFRYGCIPTCADNAYFVVQFNQGKVGYQGLQDRGAGRNSYNTIDGGNVAAD
                     TPQTHLPPGFSMDPRKMSLSAVELYRVAVNEKDRAVAQLDFTFDASDTLTWKTGAKYR
                     DKQRRARFSDEFYAWNTATGGPVPTLADFPLMDQPGRSGYDIGNGRDYARDFSQVVPM
                     QALAEWYRQNKQRLVLVPGDSALVANGAALGRNFDVAEKQYAAYAMGTWTPDERWDVV
                     GGVRLERTATDVRGQVLERDADGSSALVPNLGRKRYTSVLPQLNVRFSPRSDLNLRLG
                     LTRSFARPNFGDINPGGSFMEADGTFTSGNADLDPTYSDNLDLMAEWYAGPLGLLSGG
                     VFYKNISNPVFQSSSTGNFNGNTNVTFYRPENGDDAKLWGAEFAFVRRFDFLPGLWSN
                     FGINANLTLMDSRMRIPGRSGNVPITGQADRLYNVTVYYDDGAFAARLATNHKGAYIE
                     SHGDSSTTDAWYGANTSVDFSASYTFDRWTVFAELSNLTNEPLKYYQGSPQRPLQVEY
                     YGRRAQIGLKYLFQ"
     gene            complement(11513..12655)
                     /locus_tag="QEL58_001547"
     CDS             complement(11513..12655)
                     /locus_tag="QEL58_001547"
                     /EC_number="3.6.1.63"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019464464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-D-ribose 1-methylphosphonate
                     5-triphosphate diphosphatase"
                     /protein_id="HDS1676027.1"
                     /translation="MGEHILDNLKLVLADEIVHGHVVLDGPRIHAVGQGRVRRAGAED
                     CGGDWLLPGFVELHTDNLEKHLVPRPGVAFPAAAAVQAHDAQLLAAGITTACDALAVG
                     DVEADSVRVRSLQAAHAALAEARRGGGLRSNHYLHLRAELPYPGLLPLLEPLLDDPAV
                     RLLSLTDHTPGQRQFRNLQRYAAYYGLPADAPAPYLDDLLQARRAQQARYRPAHLQQV
                     LQWVRERGLCLASHDDTVPADVDEAVASGARICEFPTTLEAAVAARVAGLTIVAGAPN
                     LVLGGSHSGNVAALELARADCLDVLSSDYVPASLLPALGVLCAQLGWSLPRAVGTVSH
                     APAQALGLRDRGRIGEGLRADLVRVRGTLPDYVAEVWVGGRRLLAQ"
     gene            12756..13502
                     /gene="phnF"
                     /locus_tag="QEL58_001548"
     CDS             12756..13502
                     /gene="phnF"
                     /locus_tag="QEL58_001548"
                     /inference="COORDINATES: protein motif:HMM:TIGR02325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate metabolism transcriptional regulator
                     PhnF"
                     /protein_id="HDS1676028.1"
                     /translation="MTMPDPAVTPRDSALPLWQQIEQALLRQIRERQLVEGDALPSAQ
                     VLAKRFAVNRHTVRRAIEALEERGYVRTETGRGSFVQEHPYHYPISRRTRFGRAMHDL
                     NVDSRYTLLDARVQVPSRQVARALGLIAGERVHRVVYSSQVEGRTVDHSEAYFPATRF
                     PGLGEVFARTPSVTRTLAAFGVTDYLRRHTTVMARLPDAEVARVLGQSTRRPVLCVHS
                     LNVDPQGQPVQFGITSFAGDWVQLMVSSDL"
     gene            complement(13542..14675)
                     /locus_tag="QEL58_001549"
     CDS             complement(13542..14675)
                     /locus_tag="QEL58_001549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03364 family FAD-dependent oxidoreductase"
                     /protein_id="HDS1676029.1"
                     /translation="MVGAGIVGLAVARALAVRGCKVTVLERHERAVGASIRNFGMVWP
                     IGVPNGPLYERALRSRQIWQELIDVAGLWHDPSGSMHVAHADDEWAVLQQYAAANAQM
                     RPCRLLDRDAALAKSPALVACELRGALFNADELVVDPRQAIRALPDVLRERHGVQFQW
                     RTPVTAVESGRVWSGSRRFEADQVFVCSGPEFEQLYPELYAAAPLTRCKLQMLRLAAQ
                     PSGFRLGAALCGGLSLVHYAGFREAADVAPLQARYQAEHADLIELGIHVMAAQNGLGE
                     ITIGDSHAYAHTHDPFDEHAINQKVLDYLSRFMQVPNARIAQTWHGIYPKLLDGSSEF
                     VAEPTPGVTLVNAIGGGGLGMTLSFGLAEELVDGRYTALRRAA"
     gene            complement(14708..16003)
                     /locus_tag="QEL58_001550"
     CDS             complement(14708..16003)
                     /locus_tag="QEL58_001550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008267564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676030.1"
                     /translation="MNRPSLRERLQGHPLALTVFAGSAALSTYACMYAFRKPFAAASF
                     DGQHLFGADYKVWLVVAQVLGYMCSKFIGVRVIGELRAERRASLLLGLIGISWLALLG
                     FALVPAPWNIPFLFLNGLPLGMVWGLVFSYLEGRRTTEAMGAILASSFNMASGVVKSV
                     GKWLLLQGVSEFWMPFLCGLLFLPLLLVSVRMLERIPAPDADDLRERSPRLPMDRTQR
                     RAFVRRFLPGLALMILCYVCLTVVRDFRDSFEAELFRELGYGGSAGVFAAIETPVAFA
                     VLALTAGLTWFRNNLNGLMALHVLMFIGLATAGLSTLAFREGMLHPLAWLGLVGFGLY
                     LAYVPFNCVFFERLIATFKVAGNVGFVMYLADAFGYLGSVLVLLGHEFSGLQLSWVRF
                     FSSAVIHLSLLGGACLLLSLLYFHHKALRLARMPALASV"
     gene            complement(16000..16689)
                     /locus_tag="QEL58_001551"
     CDS             complement(16000..16689)
                     /locus_tag="QEL58_001551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008268732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IA family hydrolase"
                     /protein_id="HDS1676031.1"
                     /translation="MRYRLAVLDIAGTTVADPGLVAHAFAEAMAVAGHAIEVEDVRPL
                     MGYPKPQAIARLLGATVDDPRVAPIHADFVARMLECYRHAPGIAPLPGAEALFDTLRA
                     HGIRIGLDTGFSRDIAEAIIARLGWQDRIDAFVASDDVPAGRPAPYMIQALMQRTGVD
                     DAAAVVKVGDTEVDINEGRNAGVGLNVAVTTGAFTRAELLPHGPDHIINHLDRLPSLL
                     GLAPSGTVAAA"
     gene            complement(16779..17684)
                     /locus_tag="QEL58_001552"
     CDS             complement(16779..17684)
                     /locus_tag="QEL58_001552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010481100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDS1676032.1"
                     /translation="MSRPPLHALQGFVAAARLGNLSRAAASMNLTVSALSHQMRQLEE
                     RLGQPLLIRQPRGVTLTLEGQRLLEQVGPHLDAINEAFQPYAARAEHVLTISAVPSMA
                     SAWLVPRLGHFVAAHPQIEINLQSSERLVDFERQRQFDAALRLGTGHWPGLVVEPLFD
                     EWLLPMASPALIERMGGIDRVPLTHWPLLGDPDGAWGAWFALSGQSPPPRFVAVLDDS
                     EAHHRAALDGVGVALGRVTRARLLLESGQLVALSSQRLKTAWPHWLVYPQRSASHRGF
                     LAFRDWLHAQAAEHVRHMATQGSPG"
     gene            17783..17962
                     /locus_tag="QEL58_001553"
     CDS             17783..17962
                     /locus_tag="QEL58_001553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005419683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676033.1"
                     /translation="MNIFSSLLFLHGHVANAELARRLASPVPPPSSTPAVAGRWPATS
                     PTGQPAAAGRCPARP"
     gene            complement(17959..19506)
                     /locus_tag="QEL58_001554"
     CDS             complement(17959..19506)
                     /locus_tag="QEL58_001554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005414645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase"
                     /protein_id="HDS1676034.1"
                     /translation="MTAHAPCRWLLTSLLIALAALAGCQPNLRAEAVPSAEARPHNVI
                     VMINDGAGWGTWDAAAYWQYGSREGAPYADFPQRLAVTTFPLNSSSQPTGDNAQTLGY
                     DAGKAWDTEPVPAPDLPFVGYQYLAAVATDSAAAGTALSSGIKTYNNAINYNNDGNPV
                     EFNTLRAKRLGMATGVVTSVPFAHATPAAFAAQNASRNNYHAIAHQMLAQGHMDLVMG
                     TGGPGYSVDGLACGPATGAAQAEGCATPWEWVSQQDWQQLEAGRTIGGNPSGPWRLIR
                     GKEEFAALAQGQLPADRPLIGVPRVANTLQQARQLQVLGKDAATPSGVRKIDSVPDLA
                     TMTRGALRFLQQRSSNGLFLMVEGGATDWAAHTSACGTEWHYGQCSDQPQYGRLIEET
                     VEFNDAVAAVVDWIERNGGWERNLLIVTTDHDNSMPMGPDAQSVAFQPVRNNGRGRMP
                     GMSFRPTGNHSNALVPLWAKGAGAELLAKRVRGVDAGYRQYVRWNDGRYIDNTDVAAA
                     VQEALQR"
     gene            19627..20409
                     /locus_tag="QEL58_001555"
     CDS             19627..20409
                     /locus_tag="QEL58_001555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine carboxypeptidase"
                     /protein_id="HDS1676035.1"
                     /translation="MSLPVPERAPLSSITLDAATFAVIHQHNAETARQPASLTKLMTA
                     YAAYACVEERGRAWDEAVTIADDDVHAVADDETRMGLVPGETITLARLLEGLMIVSGN
                     DAALAIARHLDGSQTAFLDRMNRHARQLGLRSTWFASVSGITTPHHASSARDMAVLAA
                     CLLNDHPQILAITAQRAFAHGPFGRNNQNALLGEDGVDGLKTGYTRAAGFCLAATACR
                     AVPGRAQPVRLITVVLGSESRDARDALVRDQLSAGFAALANS"
     gene            complement(20423..21016)
                     /locus_tag="QEL58_001556"
     CDS             complement(20423..21016)
                     /locus_tag="QEL58_001556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HDS1676036.1"
                     /translation="MPATPAPTRRRLTRGQRARQLLDVAWALVGEEGTDALTLGRLAE
                     AAGVTKPVAYDHFVTRNGLLAALYDDYDGRQTVVFHERIGRARAQLGDRAAAIASGYI
                     DCILSQGSEVQGILAALVGAPELHEVRRRYQQDFIDNCQVWLGPFAAEGAVPLAGRWA
                     ILGAAEALSEAVAAGALDKADAEAELQRVIVATVKRR"
     gene            complement(21033..21629)
                     /locus_tag="QEL58_001557"
     CDS             complement(21033..21629)
                     /locus_tag="QEL58_001557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005414648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HDS1676037.1"
                     /translation="MHSLIVIAHPDPSSLTHAIAGRIGEAIGAAGAGNSVAHADLMAE
                     GFDPRFSLQDQALFRGTGAAPADVAAEQARLDAADTLVLVYPLYWWSFPALLKGWIDR
                     VFTQGWAYQEGADGKVQKKLQRLRVHLVGVGGAGAEMIERRGYGAAMKTQIDMGIFDY
                     CGARVLSSELLLDADSGAAGAHLQSAAEIGRKIGAPMR"
     gene            21756..22289
                     /locus_tag="QEL58_001558"
     CDS             21756..22289
                     /locus_tag="QEL58_001558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006397174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676038.1"
                     /translation="MHRHLLAPLLALLMTMAVPSAVAGELGPEDSAALRREVQAMMDA
                     FARGDTDLIIARTHPSLKLAAGGDEAYARMTRDTVEQLHKAGVTIVSDEAGVPGRTYA
                     AGDEEVCFVPRQSLLRVRDAPMRSTSFMVAVRRVGTTQWSYLDGAALLDNPALLRQLL
                     PALEPGVVVPKGGMEAL"
     gene            complement(22365..23192)
                     /locus_tag="QEL58_001559"
     CDS             complement(22365..23192)
                     /locus_tag="QEL58_001559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010481084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate lyase/phosphoenolpyruvate mutase
                     family protein"
                     /protein_id="HDS1676039.1"
                     /translation="MTSIDADFPRRRAAFRQLHAQGCFVLPNPWDVGSARYLQRQGFL
                     ALATTSAGCAWSEGRPDGAVSLQATLEHLRLMVGATPLPVNADFGDGFGATPTAVGEA
                     VAAAIDTGVAALSIEDASGVADAPLRPIEQAVERLRAARAAIDHAGGDVLLVGRAENF
                     FVGVPDLQDTLQRLRAYAEAGADVLYAPGISTREQISAVVAAAGSKPVNLLVGGPTPM
                     RLQDIAALGVRRVSLGGALARAAWGGLMQATQPIVQDGCFDGLQQGASGAALNALFR"
     gene            23355..>23649
                     /locus_tag="QEL58_001560"
     CDS             23355..>23649
                     /locus_tag="QEL58_001560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012512267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic ring-cleaving dioxygenase"
                     /protein_id="HDS1676040.1"
                     /translation="MHPDLDSPADTYIDASEDDAQWADLLSPARRRLIASAGLTAGGL
                     ASASTAAAATRDDHAVNTTEPGQPGFRAIVPPAAKGSSPWGQATAREPTPRPAS"
BASE COUNT         3802 a         8288 c         7965 g         3594 t
ORIGIN      
        1 gccgcggcgc gggcctgccg cgccggctgc aggcggaacg ctcccaccgc ttcggccagg
       61 gcatgcacct gcgcctgcat ctgtgcagtc gaggcaccgg cctcttccac caggctggca
      121 ttgcgctggg tactggcttc catctgcacg atggtctggt tcacctgtgc gatgccggca
      181 tgctggtcct gcgatgcgct gcggatgccg gccagcaggt ccgccagctg ctgcacgctg
      241 ccgacgatct cgcccatcgt ggtgccggcc tgctcggcct gctggttgcc ctgcccgaca
      301 cgcgccaccg aatcctcgat caatcccttg atctgcttgg ccgcctcggc actgcgctgg
      361 gccagcaggc gcacttccgc agccaccacg gcgaaactgc ggccctgttc gccggcacgc
      421 gccgcttcca ccgctgcgtt cagtgcaagg atgttggtct ggaaggcgat gccatcgatc
      481 agctgggtga tgtcaccgat ccgccgtgag gcttcgctga tgccgtgcat ggtcgccacc
      541 acctggccca cggcgtcacc gccgcgctgg gccaccgctg ccgcaccctt gaccagcgca
      601 tcggcgcgac cggccgcgtc ggcattgcgg cccacggtgt cggtcagctc atgcatcgac
      661 gccgcggttt cctccaggtt ggccgcctgc tgctcggtac gctgcgacag gtcgtggtgg
      721 ccagcgacga tctcaccaac gccggtatcc aggctggagg tggcctgctg gatgcgggtg
      781 acgatgcggc ccagctgcgc gacggtggcg ttggcatcgt cgcgcatgcg cgcgaacacg
      841 ccctgcaggt cgccgtccat gcgcacgctg aggtcgccgc gtgccagcgc ggccagcagc
      901 gcctgcaggt cgccgagatt ggtttcaaag gtcgccagca ggcggttgat gctggtcgac
      961 agcgtgcgca cgaagccctg cttgccgtcc agcacgatgc gaccgtgcag gtcaccgtgc
     1021 gcggcggcgt cgaccagtgc ggccacttcg gtttcgagca gggtttccag tgcgcggctg
     1081 cgccattcca ccgccacacc gaggaactgt ccttcgtcgg tgatgggatt ggcgatcagc
     1141 tggtagcgaa caccgtcttg gccgatctcg cgttcttcgc gctggcgtac gccggccagg
     1201 ctggccagcg ccggatgcag gcgcaccgct tcgctggcca cgagcgcgtc agcctgcagg
     1261 tccagctgct gcagcagcgc cgggttggca taagccacca gcccttcggc atcgatcacc
     1321 atcaggccgg tctgtgcgct gtccagcgcc tggcgcacgc gggtattgcc gcgcgccacc
     1381 gcgcgctcgg tctcgatgcg cgcacgcagg cgctgctgca tgtcgaccag gcgctgggcg
     1441 agctggccga tctcatcatt ggcgttgtac acgcgcaggg tggtgtccag gcggtcgtcc
     1501 gcgatatcgc tggcgaagcg cagggtgtcc tggatcggct ggcgcaccgc gcgcaggacc
     1561 agcaccaggc tggtgatcag cacgccggca accagcagca gggtcagcgc gaacagtacg
     1621 ctcatggcgc gcgtgccggc ctgctggcgc gcctgtgcct cggccagcgc cgccacctgg
     1681 gcctgctgga aggcggccag tgccggcgcc acgccggcgg cggtgtccag cagcgactgc
     1741 gcctccacat ccaggccgac gcgggcggcg gtgtaaccca gcaaggcgac ctgataggcc
     1801 tccatgccgc tgcgcagggc atcctgcaca tcggtggaca ggccggccag cgcgaggtcg
     1861 aacggcagct tctcttcgct ggcacggtcg gcatgggcag agtcaccgtc gagcagcagc
     1921 aatgcttcct gtcggcgcat cttctgcagg gacagcgcca gcaaggggcg ctgcagcgca
     1981 tcgacctgcg cctgcagggt gtcggcggcc tgctgcagct gcgcggcaag gccggcatca
     2041 ccccggccca tctcgtcgac ccgttcgaac agggccgcga cgccctgaga gaacgcgtcc
     2101 gcggcttcgg tcagcacctg cagcgccttg cgccgcccgg catccatcgg tatcgcgcgc
     2161 agcgcctgca ggtcggcctg cagtgccttc tgtgtggcca gcaactggtt gcggtcagca
     2221 tcatcgaaac tgcgggcata ctgggtctgc aggcgccggg cttcggccac gcgcgtggcc
     2281 aggctggcgg ccaggtcgct gccgcgctgg taactggcct gattgcgtgc ggcctgtgcg
     2341 ctggcgtggc cggtccaggc gtagactgcg gcgattgcca ccaggcccag gccacagacc
     2401 cagagggttg ccttgagctt gttggctacg ctgagccggt gcggctgcag ccacagcagc
     2461 aggttcgacg acagcacgct cgacgacagc acgccgggcg acgccgcgcg caggcgggcc
     2521 agatgcgtgc gcagggaccg gaggtgggga acgacggccg acatgacaga ctccaggcgg
     2581 aaggacgcac ctgtatcggc tggattcccg gcaactttag gcccgttttc gtgccactgc
     2641 gacgctcgcg ggcggacgcg gcctttgtac cgggcacagg cgacgggggc atgacaccgg
     2701 cgctgcgctt gacctcaacc ccggttgggg gcgcacagtg gacgtccctc ccctgcccgg
     2761 tgtccgcatg acgacgctcg atatcccccg ctacctgcag cgcctgcagc tggatgcacc
     2821 acccccgctg accctggccg gcctgtcact gctgcagcaa cgccataacg cgctgctgcc
     2881 gttcgagacg ctcagctgcc tgctgcgtga cgcggtaccg atcgacctgg acagcgtgca
     2941 gcgcaagctg ctcgacgagc gccggggcgg ttactgcttc gaactcaatg gcggcctgct
     3001 ggcgctgctg caggcgctgg gcttcgatgc ccagccgctg agcgcacgcg tgctgctggc
     3061 ggcacaggat ggcgagctga ccgcacggac ccatctgctg ctgcgcgtgc atgtggaagg
     3121 cgaggactgg ctggtcgatg ccggcttcgg cagcctgacc cccaccgtgc cgctgcgcct
     3181 gcacgacacc gcaccgcagg ccacgccgca cgagcgctac ctgctgcagc ggctgggcga
     3241 tgacggcgat ttcgtgctgt cagccgaatc cagcgatggc tggcgcgcga tgtaccgctt
     3301 cgacctgcag gcgcctgcgc cgatcgacaa cgtggtgggc aactggtacg tgtgcaccca
     3361 ccccgactcc agcttcccgg gccagctgcg cgcgtcgctg accgggccgg actggcgccg
     3421 caccatcggc agcggcaact acaccgagta ccgcccgggg caagcgccgg acaaacgccc
     3481 gctgcacgat gtcggtgacg tgcgcgaggt gctgcagcag cacttcggcc tgcagctgcc
     3541 ggatgacccg cggctggacc cggcgatcaa tgactggctg cagcgctcgc gcgccgcaac
     3601 accgtagcgt cgagcttgct cgacggaggc gttgctagcg ccgtcaacag cagtcgagca
     3661 agctcgacgc tacagaatcg cgcgcgcctg cagcgcgatg cggttgcctt cgctgtcgcg
     3721 gatctcggcc acgcgccagt cgccggcgtc ggccgggccg aagcgcagtt cggcgccggc
     3781 ctgcagcgca cggtcgaggc tggcctcaag atcatcgaca ccgatataga ggcgcgcgcc
     3841 ctgttcggag ggctggtagt ccgccccctg caccagcgac aggctggcac ccgtcgcgtc
     3901 atccgagaac ggcaggtagg ccatgtggca gtcatgcagc aggatcggct cgtccaccac
     3961 cacctgcagc cattgctggt agaaggcgat ggcacgggcc aggtcactgg cggggatctc
     4021 gacatgcagg atcgggttca cgggttttcc tcgcgcggcg cagtcagatg atgcgcaggg
     4081 taatcgcctt cagtaccgca cgggtacgat cgcgggtacc aagcttgtcg agaatggcgg
     4141 aaacatagtt cttcaccgtg ccttcggcca ggaacaggct gcgcgcgatc tccttgttgc
     4201 tgtagccgcc agccagcagg cgcaggatcg ccacttcgcg ttcgccgaag gtatcgctgg
     4261 ggggcgcttc gtcgtgaaag cggtagcgcg cgcgcaccgg ctcggtgctg accggcatca
     4321 gcagcgtctc gccggcggcg acgcgctcga tcgcctcacg caggtcggcc ggcgcggcgt
     4381 ccttcagcag gaagccctgt gcaccagcct cgctggcacg cagcagcagg tcactctcat
     4441 cgaaggtggt cagcagcagc agcggcgtgg catcgccacg tgcgcgcagc tggcgcagcg
     4501 cctcgatccc atccagaccg ggcatgcgga tgtcactgag caccacgtcc accggctgcg
     4561 tggccaacgc gtccagcagg gcctggccgt cctcggcctc cagcaccacc tccaccccca
     4621 gcccctgcag cagcgcacgc aggccggcgc ggaccagcgc ctggtcgtcg gccagggcaa
     4681 cgcggatcgc ggcgccgctc atgccggcaa ccatgcggtc aggtgcatgc cgccctgtgc
     4741 ggtgcgcgcc agttccagct gaccgcgcac cgcagccaga cgctcgcgca tgccggcgat
     4801 gccattgccc tcgcggatgc gctcactgcg ctggccatca tcacggatat caatacgcaa
     4861 ccgggattcc tcttcgttga tcgccagcca tacggtgcct gcgttgccat gccgggccgc
     4921 attggtcagc gcttcctgca ccagccgcag cacagtctcg gccatcagcg gatcggtcac
     4981 gcgcacgccc tcgccgatcc gcagttgcag cttcggccgt gggaagggtg cggccagcgc
     5041 gtgcagtgcg gtggccagat cgaggccgcg atcatcgcgc atcgattgca ccacctggcg
     5101 gatgtcagcc agcagttcgc ccgacagctg ctcggccagc accaggccgt cgcgcccggc
     5161 cagcgcagga tcagccgcca gcgcacgcag gttcaaccgc atcgcggtga gcttgtggcc
     5221 cgctacatcg tgcagttcgc gcgccaggcg caggcgctcg gcatcgcggg cgctgtcggc
     5281 cagcaatgcg cgcgtggcca gaagatccgc gttgacccgg gccaggtcat cgcgggccag
     5341 ggccgtgctg cgtgcgtagt gtgcggtcag tgcggcgaac gcctggaagc cgccgtacag
     5401 cagcaccacc agcagcggct ggctgaagcc actgtggcgc agcaccgcat acatcgccag
     5461 gttggccagc aatgcgacac ccagcatgaa gcgcggcggc cagtgctcgg ccagctgtgc
     5521 gaccagcacc accagcagca caggggcggt gccggtgcgc ggctgtaacg cgaccagggc
     5581 aatcgccagc agcgcctgca acacggcagc gaccgcgcgc acacgcgacg gcatcgacgc
     5641 ccagccatgc agcacgaaca gcaacaggaa cccagcaagc aacagcaggc tgggggcggc
     5701 ctcgccgcgc tgcaccgcga atgacaggcc gaccaccagc acggtcacca gaccggcaag
     5761 gctgagcgga cgcaacaggt ggcggagcag gctgggcatg gccagatgct gacggccgcg
     5821 cctgccgtcg gcaatgggtc cagcgcagaa agtgacttct ggcacgtcga atcgatgacc
     5881 actggccctg aaaccggccc cacgccccgc gcagactggc cccacaccgc agcacaccgc
     5941 ccatttccgg agccactgcc atgatccgta ccgccctgct cagcaccgcc ctgaccgccc
     6001 tggccctggc cggtggcgcc cacgctgccg atctggccgt gaccgtacac gatgtccgcg
     6061 tgcagaccgg tacgctgcgc gttgccctgg tcgacaacgc caccgcctgg gacggcaagg
     6121 ctgcgcccgt gcaggcgcag caggccaggc ccagcggcga cagcgcccgc ttcgtattca
     6181 agaacgtgcc ggccggcagc tacgcggtgc tgctcaccca cgacgagaac gacaacggca
     6241 aactcgacac caacctggtc ggcatgccgg tggaaggcta tggcttcagc aacaacccgc
     6301 aggtgatgcg caagccgacc ttcgacgaag cgcgcgtcaa cgtgccggcc gccggtgccg
     6361 ccatcgacat caccctgcgc tgattcctgc atccagaccc gaggccatca tggaccgtcg
     6421 ccgcttcctt cgtaccctgc tcagcagcag tgcctgcctg gcgcttggcg ccaccgccct
     6481 gcgcagcgca cccgccttcg ccggcgaccc tgcgcacttc gcgcagggcc tgcaggagca
     6541 cccgtggctg ctcggctggc gcagcgtcag cagtgaaagt ctcggcccgg ccaccgtgca
     6601 gttgcagggc cggctgccgg ccgggctggc cggtacgctg taccgcaatg gcccggcctg
     6661 gaccgagcgc gatggcttcc gctacgacca ctggttcgac ggcgacggca tggtgcatgg
     6721 ctggcgcttc aacggcgatg gcagcctgac ccatcacggg cgcatggtag ctacgccgaa
     6781 gttcagccgt gagcagaagg ccggccgctt ccagtacccc gctgcgggca ccagcgtccc
     6841 cggtgcactg gcggtacgca acaacgacga tgccaacgtc gccaacacct cggtgacgat
     6901 gatcaacggc cgcctgttcg cgctgtgcga atccggctcg gcgttcgagg tggaccccga
     6961 ttcgctgcag accctcggcc cggtcacctg gcgcccggac ctggccgcgc tgccgttctc
     7021 cgcgcatccc ctgcccgacc gcgatggcag cgtatggaac ttcggctcga tcagcctgat
     7081 ggggggccac ggcctgctgg tctggcacat cggcaaggac ggtcagctgc gcagcgccaa
     7141 cgtgatcgaa acacccgagc atggctatct gcatgccttc gcgatgaccg gacagcatct
     7201 cgttttcgtg ctgatgccgt tcgacttcac cggcaccggc ggcagcttct tcgaacgcat
     7261 gcagttcgca ccgcagcgcg cggcgcgcat cgcggtggtc gccaaggatg cgccggacaa
     7321 ggcgcaatgg ttcgaggcgc cattcgcagc gatctaccac ttcggcgatg cgttcacccg
     7381 cgacggcggc atcgtgctgc gcgcggtgcg ccacgacgac atcaacgaag cgcgctcacc
     7441 gatgaaggaa gcaatggccg gcgatggggc acatgcggcc aatagtggtg ccagcctggt
     7501 cgagctgcac ctggacctgc gccgtggcca ggcgcgctgg gagtcgctgg gcatcagcgc
     7561 ggtggagttt ccgctgttcg atccgcgctc ggccaacacc cgtggtgcgc ggctttacgc
     7621 gcccaccatc gatggtccgg ccaacgcgcc ctacttcaac gccgtggctg cattcgacat
     7681 cgagcggggc cgccgccagt tgtggcacta cgggccggac atcatggccg aggaacacgt
     7741 attcgttccg cgcccgggca gccgcaacgc cgacgacggc tggctgatcg gcaccctgct
     7801 cgatccggtg aacacgcgca gtggcctggc cgtactcgat gcgcgtcacc tggacgatgg
     7861 cccgatcgca caggcctggc tgccctacgc ggtgccgctg ggcttccacg gcacgttcgc
     7921 cgcgcgcggc tgagtgcacg ccgcacggac accggcgctg gcatgctggg gttccccttc
     7981 ctgcggagcc cggcatgtcc ctggcagacc atcgaaacgc gctggcaccg cagggattcc
     8041 tgcgcgtggc gatcaacctg ggaaatccgg tgctggcaca gggagacgcg cgttcgccgc
     8101 gtggccccac gctggaactg gccaccgcat tggcgcaacg gatggcggtg caggcccgct
     8161 tcacctgtca cgacgcagca gcctcggtgg ttgctgcggc caatcaggac gaatgggacc
     8221 tggccttcct ggcgattgat ccggcgcggg cggaccgcat cgccttcagc gcgccgtatg
     8281 tggagatcga aggcacctac ctggtgcgtg cggacagccc ggcgcagcgg gtggccgacc
     8341 tggaccacga tggcctgcgc atcgcggtcg gccgcggcgc ggcctacgac ctgttcctca
     8401 gccgcgagct gcgccacgcc aggatcgaac gcgccgacac ctccgcggcc gccattgacc
     8461 tgttcgacca gcagcacctg gatgctgccg ccggcgtgcg ccagccactg gaagcctggg
     8521 cgcggtcgca tcctggccac cgcgtgctgg ccgatcgctt caccgtgatc cagcaggcgg
     8581 tcgcggcgcc ggcatcgcgc ccggccgatg cgttgcgggc gctgttcaag gaggtgcagg
     8641 cgatcaaggc aggcccgctg ctgggcgaag ccttcgcccg ggccggacag gcggtcacgc
     8701 tggtgcggtg aatgaagcgc acacgcagtc gagcatggct cgacgctgca gagcgcgtgc
     8761 gggctactgg aacaggtatt tcaggccgat ctgcgcgcgg cggccgtaat actccacctg
     8821 cagcggccgc tgcgggctgc cctggtagta cttcagcggt tcgttggtca ggttgctcag
     8881 ttcggcgaac acggtccagc gatcaaacgt gtaggacgcg ctgaagtcga ccgaggtgtt
     8941 ggcaccgtac caggcatcgg tggtgctgct gtcgccatgc gattcgatgt aggcgccctt
     9001 gtggttggtc gccagccggg cggcgaacgc accatcgtcg tagtacacgg tgacgttgta
     9061 gaggcggtcg gcctggccgg tgatcggtac gttgccgctg cggcccggga tgcgcatgcg
     9121 cgaatccatc agggtcaggt tggcattgat gccgaaattg ctccacaggc ccggcaaaaa
     9181 atcgaagcgg cgcacgaagg cgaactcggc accccacagc ttggcgtcgt cgccgttctc
     9241 gggccggtag aaggtgacat tggtgttgcc gttgaaattg ccggtgctgc tgctctggaa
     9301 caccgggttg ctgatgttct tgtagaacac gccgccggac aacaggccca gcggtccggc
     9361 ataccactcg gccatcaggt ccaggttgtc cgaataggtc gggtcaagat cggcattgcc
     9421 ggaagtaaag gtgccatcgg cctccatgaa cgagccaccc ggattgatgt cgccgaagtt
     9481 cgggcgggca aagctgcggg tcaggcccaa ccgcaggttc aggtcactgc gcggcgaaaa
     9541 gcgcacattg agctgcggca gcaccgaggt gtagcgcttg cgacccaggt tgggcaccag
     9601 cgcgctgctg ccatcggcat cgcgctccag cacctgccca cgcacgtcgg tggcggtgcg
     9661 ttccaggcgc acgccaccga ccacgtccca gcgctcgtcc ggcgtccagg tgcccatcgc
     9721 ataggccgcg tactgttttt cggccacgtc gaagttgcgg cccagcgccg cgccattggc
     9781 caccagcgcc gaatcgcccg gcaccagcac cagacgctgc ttgttctgcc ggtaccactc
     9841 ggccagggcc tgcatcggca ccacctgcga gaagtcacgg gcgtagtcgc ggccgttgcc
     9901 gatgtcatag ccgctgcggc cgggctggtc catcaacggg aagtcggcca gggtcggcac
     9961 cgggccgccg gttgcggtgt tccaggcata gaactcgtcg gagaagcgcg cgcgacgctg
    10021 cttgtcacgg tacttggcac cggtcttcca ggtcagcgtg tcgctggcgt cgaaggtgaa
    10081 gtccagctgc gcgacggccc tgtccttctc attgaccgcc acccggtaca gctccacggc
    10141 gctcagcgac atcttccgtg ggtccatcga aaagcccggc ggcagatggg tctgcggggt
    10201 atcggcggcg acgttgccgc catcgatggt gttgtacgag ttgcgccctg caccgcgatc
    10261 ctgcaggccc tggtagccga ccttgccctg gttgaactgg accacgaagt aggcgttgtc
    10321 ggcacaggtg ggaatgcagc cgtagcggaa gtcgttctcg gcgctggcca gcttccagtc
    10381 cacctggccg cggccgaagg tgtgctggcc accgaactcg aaggtcctga actcggtgat
    10441 cagctcgttg tggatgttct gcagctcgac gcgatccttg tcgaaacggt agcggtgctt
    10501 gtagtgcgtc tcatcgtcgc tcagttcgcc atactggccg cgcacgtaca gccggtggcc
    10561 atcggccggc aggaattcca tgccgccatt gacaccgcgg gtggtgcgct cgccagtgta
    10621 gtcacgcagc tccaggcggt agatgccaag gccatcggca ctacgccgcg gctcgaagtt
    10681 gtcggtcgcc cacgggcgct tccagtaggt gccgttgatc aggaacccga agcggccatc
    10741 ggcgctgcgg tcgccataca gcacattggc gctggtaccg gtatcgacgg ccttgtcgtt
    10801 gtagttgccg gccacgctgg cggcgaaggt gcggcgcgca ggcgcggtgc gggtaacgaa
    10861 gttcacctgg ccaccgatgg cgtcgccttc acggtccggc gtcagcgtct tgcttacttc
    10921 aatgcgctcg atcagctcgg tggggaagaa atcgaacgcg gtggcgcggc tggtggtttc
    10981 ctcttcggcg gtcggcagcc ggtcaccgtt gagggtggtc gagttccact gtgcgggcag
    11041 gccacgcacg gcgacgaagc ggccttcgcc ctggtcgcgt tcgatcgaca cgcccggtac
    11101 ccgctgcacg gcttcagcgg cgttgtggtc gggcagcttg ccgatgccat cggcgctgac
    11161 cacgttcatc aggttgctgg cttcgcgctg ggcgtccagt gcctgcttct cgccgctgac
    11221 gatgctgccg accacggtga cggtatccag atcgacggca gagggagtgg gtgcggcatc
    11281 agtcgcgacc ggggacgcgg cctggacggc cagcggggca tgcagcaggg cgagcaggcc
    11341 cagggtaagc ggatggcgcg taggcagagt ggacatggcg atggcggcgg caagggaaag
    11401 tggaccgctc cagcgggagc ggtgatggcg gccactttca atcagcgcgg tgaagcgcag
    11461 gcggcatcca ctaggcaggt cggggcagct gtctaggtga tcgcgagggt ggctactggg
    11521 ccagcaggcg gcggccaccc acccagacct cggccacgta gtccggcagg gttccacgca
    11581 cccgcacaag atcggcgcgc aggccttcac cgatgcggcc ccggtcacgc aggcccagcg
    11641 cctgtgccgg tgcatggctg accgtgccca ccgcgcgcgg caggctccag cccagctgcg
    11701 cgcacagcac gcccagtgca ggcagcaggc tggccggcac atagtcggag gacagcacgt
    11761 cgaggcagtc ggcacgggcc agttccagcg ccgccacatt tcccgaatgc gagccaccca
    11821 gcaccaggtt gggggcgccg gcaacgatcg tcaggccggc cacacgcgcc gcaacggccg
    11881 cctcgagcgt ggtcgggaac tcgcagatgc gcgcaccact ggccacggcc tcgtccacat
    11941 ccgcaggcac ggtatcgtcg tggctggcca ggcacaggcc gcgttcccgc acccactgca
    12001 gcacctgctg caggtgtgcg gggcgatagc gcgcctgctg tgcccggcgt gcctgcagca
    12061 ggtcgtccag atagggggcc ggtgcgtcgg ccggcagacc gtaataggca gcatagcgtt
    12121 gcaggttgcg gaactggcgc tgccccgggg tgtggtcggt cagcgacagc aggcgcaccg
    12181 ccggatcatc cagcagcggc tccagcaatg gcagcaaccc gggatagggc agctcggcgc
    12241 gcaggtgcag gtagtggttg ctgcgcaggc caccgccacg gcgcgcctcg gccagcgccg
    12301 catgcgcggc ctgcaggctg cgtacgcgta cgctgtcggc ctccacgtcg cccacggcca
    12361 gcgcatcgca ggccgtagtg atgcctgcag ccagcagctg cgcatcgtgc gcctgcacgg
    12421 ccgcggccgc tgggaacgcc acgcccgggc gtggtaccag gtgcttctcc agattgtcgg
    12481 tatgcagctc gacaaacccc ggcagcagcc agtcgccgcc gcagtcctcg gcgcccgccc
    12541 tgcgcacgcg cccctgcccc acggcgtgga tgcgtggccc gtccagcacc acatggccgt
    12601 gcacgatctc gtcggccagc accaatttca ggttgtcgag gatgtgttcg cccatggttt
    12661 ccgtagcccg tgtcatgcca ttgcaatcgc agcgcgttga tatgcctgca catgcagtgc
    12721 acctgtctag tccagcagcc gcagatggag gtttgatgac catgcccgac ccggccgtga
    12781 ccccacgcga ttcggcgctg ccactgtggc agcagatcga acaggcgctg ctgcggcaga
    12841 tccgcgaacg ccagctggtg gaaggcgatg cactgccctc ggcgcaggtg ctggccaagc
    12901 gcttcgcggt caaccgccac accgtgcggc gcgcgatcga ggcgctggaa gagcgtggct
    12961 acgtgcgcac cgagaccggt cgcggcagtt tcgtgcagga gcatccgtac cactacccga
    13021 tcagccggcg cacgcgcttc ggccgggcca tgcatgacct gaacgtggac agccgctaca
    13081 ccctgctcga tgcccgcgtg caggtgccga gccgccaggt ggcgcgtgcg ctcggcctga
    13141 ttgccggcga acgcgtgcat cgggtggtgt actccagcca ggtggaaggg cgcaccgtgg
    13201 accacagcga agcgtatttt cccgccaccc gattcccggg actgggagag gtgttcgcac
    13261 gcacaccttc ggtgacccgc accctggccg cgttcggggt caccgactac ctgcgccggc
    13321 acaccacggt gatggcgcgc ctgcccgatg ccgaggtcgc gcgcgtactc ggccagtcaa
    13381 cgcggcggcc ggtgctgtgc gtgcactcgc tcaacgtcga tccgcaggga cagccggtgc
    13441 agttcggcat caccagcttc gccggtgact gggtgcagct gatggtcagc agcgacctct
    13501 aggagaatcg cggcgagcgt tgcacccgcc gcgcgcaggc ttcatgccgc gcggcgcaat
    13561 gccgtgtagc gaccgtccac cagttcctcg gccaggccga agctgagcgt catgcccagg
    13621 ccaccgccac cgatggcgtt gacgagggtc acacccgggg tgggctcggc gacgaactcg
    13681 ctgctgccgt ccagcagctt gggatagatg ccgtgccagg tctgcgcgat gcgcgcgttc
    13741 ggtacctgca tgaaacggga caggtaatcg agcactttct ggttgatggc gtgctcgtcg
    13801 aacgggtcat gcgtatgggc ataggcatgc gaatcaccga tggtgatttc accaaggccg
    13861 ttctgtgccg ccatcacgtg gatgcccagc tcgatcaggt cggcatgctc ggcctggtag
    13921 cgcgcctgca gcggggcgac gtcggcggcc tcgcggaaac cggcgtagtg caccagtgac
    13981 aggccgccac acagggcggc ccccaggcgg aatccggacg gctgcgcggc caggcgcagc
    14041 atctgcagct tgcagcgggt cagcggcgcg gcggcataca gctccggata cagctgctcg
    14101 aactccgggc cgctgcagac gaacacctgg tcggcctcga accggcggct gccggaccac
    14161 acccggccgc tttccaccgc cgtcaccggc gtgcgccact ggaactgcac gccgtggcgc
    14221 tcgcgcagca catccggcaa cgcgcggatc gcctggcgcg gatcgaccac cagctcatcg
    14281 gcattgaaca gcgcgccacg cagttcgcat gcgaccagcg ccggcgactt cgccaatgcc
    14341 gcatcccggt ccagcaaccg gcatgggcgc atctgcgcat tggcggccgc gtactgctgc
    14401 agcacggccc attcgtcgtc ggcgtgggca acgtgcatcg agccactggg gtcatgccag
    14461 aggccggcca cgtcgatcag ctcctgccag atctgccgcg agcgcagcgc gcgctcatac
    14521 agcggtccat tgggcacgcc gatcggccag accatgccga agttgcggat ggaggcgccg
    14581 acagcgcgtt catggcgctc cagcacggtg accttgcagc cacgcacggc cagcgcgcgg
    14641 gccacggcca ggccgacgat gccggcaccg accacgaggg cggttgtgtt cttcatgggg
    14701 gatggactca gacggaggcg agcgccggca tgcgggccag gcgcagggcc ttgtggtgga
    14761 agtacagcag cgacaacaac aggcaggcac cgcccagcag cgacagatgg atcacggcgc
    14821 tggagaagaa gcgcacccac gacagctgca ggccggagaa ctcatggccg agcaggacca
    14881 gcacactgcc gagatagccg aacgcatcgg ccaggtacat cacgaagccg acgttgccgg
    14941 cgaccttgaa ggtggcgatc aggcgttcga agaacacgca gttgaacggc acgtaggcca
    15001 ggtacaggcc gaagcccacc aggcccagcc acgccagcgg atgcagcatg ccttcgcgga
    15061 acgccagcgt gctcaggccg gcggtggcca ggccgatgaa catcagcacg tgcagggcca
    15121 tcaggccgtt gaggttgttg cggaaccagg tcagcccggc ggtcagcgcc agcacggcga
    15181 atgccaccgg cgtttcgatg gcggcgaaca cgccggcgct gccgccataa cccagctcgc
    15241 ggaacagctc ggcctcgaag ctgtcgcgga aatcgcggac cacggtcagg cacacgtagc
    15301 acaggatcat cagcgccagc cccggcagga agcggcgcac gaacgcgcgg cgctgcgtgc
    15361 ggtccatcgg caggcgcggc gaacgctcgc gcaggtcgtc ggcatccggt gcgggaatgc
    15421 gttcgagcat gcgcaccgac accagcagca gcggcaggaa cagcagcccg cacaggaacg
    15481 gcatccagaa ctcgctcacg ccctgcagca gcagccactt gcccaccgac ttcaccacgc
    15541 cggaggccat gttgaaactg gaggccagga tcgcacccat cgcttcggtg gtccggcgcc
    15601 cttccagata gctgaacacc aggccccaga ccatgcccaa cggcaggcca ttgaggaaca
    15661 ggaacgggat gttccagggc gccggcacca gtgcgaagcc aagcagcgcc aaccaggaga
    15721 tgccgatcag gcccagcagc aggctggcgc ggcgctcggc gcgcagctcg ccgatcaccc
    15781 gcacgccgat gaacttgctg cacatgtaac ccagcacctg cgccaccacc agccacacct
    15841 tgtagtcggc gccaaacagg tgctggccat cgaacgatgc agcggcgaag ggcttgcgga
    15901 aggcatacat gcaggcatag gtggacagcg ccgcactgcc ggcaaacacg gtcagcgcca
    15961 gcgggtgccc ctgcagccgt tcccgcaacg agggccggtt catgcggcgg cgaccgtgcc
    16021 ggaaggtgcc aggcccagca gcgacggcag gcggtcgagg tggttgatga tgtggtccgg
    16081 gccatgcggc agcagctcgg cacgggtgaa cgcgccggtg gtgaccgcaa cattcaggcc
    16141 gacgccggcg ttgcggcctt cgttgatgtc gacctcggtg tcgcccacct tcaccacggc
    16201 ggcggcatcg tccaccccgg tacgctgcat cagcgcctgg atcatgtacg gcgccggccg
    16261 gcctgcaggc acgtcatcgc tggccacaaa tgcgtcgatg cgatcctgcc agccgagccg
    16321 cgcgatgatc gcctcggcga tgtcacgcga gaagccggtg tccaggccga tacggatgcc
    16381 gtgcgcgcgc aatgtgtcga acagcgcctc ggcgcccggc agcggtgcaa tgcccggtgc
    16441 atggcgatag cactcaagca tgcgcgccac gaagtcggca tggatcgggg ccacgcgcgg
    16501 gtcgtccacc gtggcgccca gcagccgtgc gatcgcctgc ggcttggggt agcccatcag
    16561 cgggcgcaca tcctccacct cgatggcgtg gccggcgacg gccatcgctt cggcgaaggc
    16621 atgggccacc aggcccgggt cggcaacggt ggtaccggca atatcaagaa cggcgaggcg
    16681 gtagcgcatg gcggcaggcg gcgttgggcg gaggtgccca gcttcgtcgc cgccggccac
    16741 gccctgatga cagcgcccgg acaggccgat gcacctgtct agccgggcga cccctgcgtg
    16801 gccatgtgcc gcacgtgttc ggcggcctgc gcgtgcagcc agtcgcggaa ggcgaggaag
    16861 ccgcgatgac tggccgagcg ttgcgggtac accagccaat gcggccacgc cgtcttcagg
    16921 cgctggctgg acagcgccac cagctggccg gattccagca acaggcgcgc ccgcgtcact
    16981 cgtcccagcg ccacgcccac cccgtccagc gccgcacggt ggtgggcctc cgaatcatcc
    17041 agtaccgcca cgaagcgcgg cggcgggctt tgcccgctca acgcgaacca cgcgccccac
    17101 gcgccgtcgg gatcaccgag cagcggccaa tgggtcagcg gcacgcggtc gatgccgccc
    17161 atgcgctcga tcagcgccgg gctggccatc ggcagcagcc actcgtcgaa cagcggttcc
    17221 accaccagcc ccggccagtg cccggtgccc agccgcagcg cggcgtcgaa ctgccgctgc
    17281 cgctcgaagt cgaccagccg ttcactcgac tgcaggttga tctcgatctg cgggtgcgca
    17341 gccacgaagt ggcccaggcg tggcaccagc cacgccgagg ccatcgatgg caccgcgctg
    17401 atcgtcagca cgtgctcggc gcgcgccgca tagggctgga aggcctcgtt gatcgcgtcc
    17461 agatgcgggc cgacctgctc cagcaggcgc tgcccttcca gcgtaagggt gacgccacgc
    17521 ggctgccgga tcagcagcgg ctggccgagg cgctcttcca gctggcgcat ctgatggctg
    17581 agtgcgctga ccgtcaggtt catcgacgcc gccgcacgcg acaggttgcc gagccgggcg
    17641 gcagccacga aaccctgcag ggcatggagg ggcggacggg acatcaggct tgaattcctc
    17701 tcaaggcgtg cttgcggaaa tgtcgctttt tgcacgtcca tgctgcccgt attgtgcaat
    17761 ccactcaagt ggaggcacgc tcatgaacat cttcagcagc ctgttgttcc tgcacggcca
    17821 cgtggccaac gccgagctgg cccggcggct ggccagcccg gtcccgccgc ccagcagcac
    17881 tcccgctgtt gccggccgct ggccggcaac ctcgccaacc gggcagcccg cggctgccgg
    17941 ccgctgcccg gcacgcccct aacgctgcaa cgcctcctgc accgcggccg ccacatcggt
    18001 gttgtcgatg tagcggccgt cattccagcg cacgtactgg cggtagccgg catcgacgcc
    18061 ccgcacgcgc tttgcaagca gctccgcgcc cgcgcccttg gcccacagcg gcaccagcgc
    18121 attggagtgg ttgccggtgg ggcggaagct catccccggc atgcggccgc ggccgttgtt
    18181 gcgcaccggc tggaaggcga cgctttgtgc atcggggccc atcggcatgc tgttgtcgtg
    18241 gtcggtggtg acgatcagca ggttgcgctc ccaaccacca ttgcgttcaa tccagtccac
    18301 caccgccgcc accgcatcgt tgaactccac ggtctcctcg atcaggcggc cgtactgcgg
    18361 ctggtcgctg cattggccgt agtgccattc ggtgccacag gcactggtgt gcgcggccca
    18421 gtcggtggcg ccgccttcca ccatcaggaa caggccgttc gaagagcgct gctgcaggaa
    18481 ccgcagcgca ccgcgggtca tggtcgcaag atccggcaca ctgtcgatct tccttacgcc
    18541 ggagggcgtg gccgcatcct tgcccagcac ctgcagctgg cgtgcctgct gcagcgtgtt
    18601 ggccacgcgt ggcacgccga tcagcggccg gtcggccggc agctggccct gcgccagcgc
    18661 ggcgaattcc tccttgccgc ggatcaggcg ccacggcccc gacgggttgc cgccaatggt
    18721 gcggcccgct tccagctgct gccaatcctg ctgcgacacc cattcccacg gagtcgcgca
    18781 gccttcggcc tgcgctgcac ccgtggccgg cccacaggcc aggccatcca cgctgtagcc
    18841 ggggccaccg gtgcccatca ccaggtccat gtggccctgt gccagcatct gatgggcgat
    18901 ggcgtggtag ttgttgcgcg atgcgttctg cgccgcgaac gctgccggcg tggcatgcgc
    18961 gaacggcacc gaggtgacca cgccggtggc catgcccagg cgcttggcgc gcagcgtgtt
    19021 gaactcgacc gggttgccgt cgttgttgta gttgatggcg ttgttgtagg tcttgatgcc
    19081 cgaggacaac gcggtgcccg cggccgcact gtcggtcgcc accgccgcca ggtactggta
    19141 gcccacgaac ggcaggtccg gcgccggcac cggttcggta tcccaggcct tgcccgcgtc
    19201 gtagcccagg gtctgcgcat tgtcgccggt cggctggctg ctggaattca acggaaacgt
    19261 ggtcaccgcc aggcgctgcg ggaaatccgc atagggggca ccttcacggc tgccgtactg
    19321 ccagtaggcg gcggcatccc aggtgcccca accggcgccg tcgttgatca tcacgatcac
    19381 gttgtgcggg cgtgcttcag ccgaaggcac agcctcggcg cgcaggttgg gctggcagcc
    19441 cgccagcgct gccagcgcga tcagcaacga ggtaaggagc cagcggcatg gcgcgtgtgc
    19501 agtcatcgga tatcccgtcg ggccagcggc ggcccacaat gacgatacgt tatatcgttt
    19561 caatgttgca gcttcatgca gccgccgcgc actatcctgc ggctctccat tgccaccgca
    19621 tgatccatgt ccctccccgt tccagagcgc gcgccgctgt cctcgatcac cctggatgcg
    19681 gccaccttcg cggtgatcca ccagcacaac gcagaaaccg cgcggcaacc ggcatcactg
    19741 accaagttga tgaccgccta cgccgcgtat gcatgcgtcg aagaacgcgg gcgcgcatgg
    19801 gacgaagcgg tcaccattgc cgacgacgat gtgcatgcgg tggccgatga cgaaacgcgc
    19861 atgggcctgg tgcctggcga aacaattact ctggcacgcc tgctggaagg cttgatgatc
    19921 gtctccggca atgacgctgc attggcgatc gcgcgccacc tggacggatc gcagaccgca
    19981 ttcctcgatc gcatgaaccg gcatgcgcgc cagcttggcc tgcgcagcac ctggtttgcc
    20041 agcgtctccg gcatcaccac cccgcaccat gcgtccagcg cgcgcgacat ggcagtgctg
    20101 gccgcctgcc tgctgaacga tcatccgcag attctggcga tcaccgcaca gcgcgcgttc
    20161 gcgcatggcc ccttcggccg caacaaccag aatgccctgc ttggcgaaga cggcgtggat
    20221 ggattgaaga ccggctacac ccgggccgca ggcttctgcc tggccgccac cgcgtgccgc
    20281 gcagtgcccg gccgggcgca gccggtgcgg ctgatcaccg tggtgctggg ttctgaaagc
    20341 cgcgacgcgc gcgacgcact ggtgcgcgat cagttgtcgg caggattcgc cgcactggcc
    20401 aacagctgac cggccatgcg gctcagcgcc gcttgaccgt cgccacgatc acgcgctgca
    20461 gctcggcctc ggcgtcggcc ttgtccagtg cgccggcagc cacggcttcc gacagcgctt
    20521 cagccgcacc cagaatcgcc cagcgccccg ccaggggcac ggcaccctcg gcggcgaacg
    20581 ggcccagcca gacctggcag ttgtcgatga agtcctgctg atagcgccgg cgcacctcgt
    20641 gcagttccgg cgcgccgacc agcgcggcaa ggatgccctg tacttcactg ccctggctga
    20701 ggatgcagtc gatgtagccg gaggcgatgg ccgccgcacg atcgcccagc tgcgccctgg
    20761 cgcggccgat gcgctcgtgg aagaccacgg tctgccggcc gtcatagtcg tcgtagagcg
    20821 ccgccagcag tccattgcgg gtcacgaagt gatcgtaggc caccggcttg gtcacgcccg
    20881 ccgcctcggc caggcgtccc agcgtcagtg catcggtgcc ttcctcgccg accagcgccc
    20941 aggccacgtc cagcaactgg cgggcgcgtt gcccgcgggt cagtcggcgg cgtgtcggag
    21001 cgggcgtggc aggcatcggc agggcacggc aatcagcgca tcggagcacc gattttacgg
    21061 ccgatctccg ctgccgactg cagatgcgcc ccggctgcgc cggaatcggc atccagcagc
    21121 agttcggatg acagcacgcg cgcaccgcag tagtcgaaga tacccatgtc gatctgggtt
    21181 ttcatcgccg ccccatagcc gcgccgctcg atcatctccg cgccggcgcc gcccaccccg
    21241 accaggtgca cgcgcagccg ttgcagcttc ttctgcacct tgccgtcggc gccttcctgg
    21301 taggcccagc cctgggtgaa cacgcggtcg atccatccct tcagcagcgc cgggaacgac
    21361 caccagtaca gcgggtagac cagcaccagc gtgtcggccg catccagccg cgcctgctcg
    21421 gcggcgacat cggccggcgc agcgccggtg ccgcggaaca gggcctggtc ctgcaggctg
    21481 aagcgcgggt cgaagccctc ggccatcaga tcggcgtggg ccacgctgtt gccggcaccg
    21541 gctgcgccga tggcctcgcc gatgcgcccg gcgatggcgt gggtcaacga ggaaggatca
    21601 ggatgggcga tgacgatgag gctgtgcatg ggagagctcc gggattcact aactaccaat
    21661 ggtaagtaat gaaatccggc gcaccagccc catcgatggg atgctgtttc cgcatccacc
    21721 gtatagtgcg gcgctcgtcc gtgagatgcc cgccgatgca ccgacacctg cttgccccgc
    21781 tgctggcctt gctgatgacg atggccgttc catccgccgt ggccggtgaa ctcggtccgg
    21841 aagattccgc cgccctgcgc agggaggtgc aggcgatgat ggacgccttc gcccgcggcg
    21901 ataccgacct gatcatcgcg cgcacccatc ccagcctgaa gctggctgcc ggtggcgatg
    21961 aggcctatgc gcggatgacg cgcgacaccg tggagcaact gcacaaggcg ggcgtcacca
    22021 tcgtcagcga cgaggcgggc gtgcctgggc gcacctacgc cgccggcgac gaggaagtct
    22081 gcttcgtgcc acgccaatca ctgctacgcg tacgcgacgc gccgatgcgc agcacctcgt
    22141 tcatggtcgc cgtacgccgg gtgggcacga cgcagtggag ctatctggac ggtgccgcgc
    22201 tgctggacaa ccccgcgctg ctgcggcagc tgctgccggc gctggaaccg ggagtggtag
    22261 tgccgaaggg cgggatggaa gcgctgtagt cgctggcgca tccctccagg cacggtgtgg
    22321 atccacggac cgctctgcag aaccgggccc acaccggatt tccgtcaacg gaacagcgcg
    22381 ttcaacgccg cgcccgaggc cccctgctgc aggccatcga agcagccgtc ctgcacgatc
    22441 ggttgggtcg cctgcatcaa gccaccccac gccgcgcggg ccagtgcgcc accgaggctg
    22501 acccggcgca cgccgagtgc ggcgatgtcc tgcaggcgca tgggcgtcgg tccacccacc
    22561 agcaggttca ccggcttcga tcctgccgcg gccaccaccg cgctgatctg ctcacgcgtg
    22621 ctgatgcccg gcgcgtacag cacgtccgca ccggcctcgg cataggcgcg caggcgctgc
    22681 agggtgtcct gcaggtccgg cacccccacg aagaagttct ctgcacggcc taccagcagc
    22741 acatcgccgc cggcgtggtc gatcgccgca cgggccgcac gcaggcgctc gaccgcctgt
    22801 tcgatcgggc gcagcggtgc atcggccaca ccgctggcat cctcgatcga caatgcggcg
    22861 acgccggtat cgatcgccgc ggccaccgcc tctcccaccg ccgttggcgt ggcaccgaag
    22921 ccatcaccga agtcggcgtt caccggcagt ggcgtcgccc ccaccatcag gcgcagatgc
    22981 tccagcgtgg cctgcagcga aaccgcacca tccggccgcc cctcgctcca ggcgcagccg
    23041 gcactggtgg tcgccagggc caggaatccc tgccgctgca ggtagcgcgc actgcccacg
    23101 tcccacggat tgggcagcac aaaacagccc tgcgcatgca gctggcggaa ggccgcgcgc
    23161 ctgcgcggga agtcggcgtc gatcgaggtc atggcgggct ccggtacggt acagcggcac
    23221 cctagcccgg ccatcgcctg cgctcaatgg cggcatgcgc aggcgcatga ggtgatgccg
    23281 cctgcttatt ggacgcggcc gagggcagtg ccggagcgtg cttgcctgcc cctcatgctg
    23341 ccacggagcc gttcatgcac ccggacctgg attcccccgc tgacacctac atcgacgcaa
    23401 gcgaagatga cgcgcagtgg gccgacctgc tgtcgcccgc ccgccggcgc ctgatcgctt
    23461 cggccgggct gaccgccggc ggcctggcca gcgcgtcgac ggcagcggca gccacgcgcg
    23521 acgaccatgc cgtgaacacc accgagccgg ggcagcccgg cttccgcgcc atcgtcccac
    23581 cggcggcgaa gggcagcagc ccgtggggcc aggccaccgc ccgcgaaccc accccgcgcc
    23641 cggccagcg
//
LOCUS       DAOKIP010000046        22581 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.046,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000046 DAOKIP010000000
VERSION     DAOKIP010000046.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 22581)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22581)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22581
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.046"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(44..1243)
                     /locus_tag="QEL58_001561"
     CDS             complement(44..1243)
                     /locus_tag="QEL58_001561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010483881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase SLT domain-containing protein"
                     /protein_id="HDS1676041.1"
                     /translation="MMRRSLPLALGLALGLAGTAGAQSLGAGISQNLTAAAALPLDPS
                     TLPAASVRNGQEIFTSFRDGLAEPSCDAEATSPRWQKQFAHAPSRLANQDDDALVLFG
                     YVVEELRKANLPTEFALIPFVESGYRPNARNGSGPTGLWQFIATTARNHRVPMANGYD
                     GRLSAVDSTQAAVRYLKTLHGMFGGDWRLATMAYNAGEYRVLQSMRKAGMNAQNAKPS
                     ALPGLSPVTHAYVEKLHALACVLEDVEDQPGVMASLDRTVPVLKDHTLPAGTSVQQWA
                     AQRALDPAKIARLNPALASGGRASGTTRVLAPVSAANATVTEAATALVASAVPAATAV
                     PTPTAAKTVAAIADRPRSRRHTVRDGESAWTIARRYGMPVKALLSLNGLSGSSVLKPG
                     AVLRVED"
     gene            complement(1240..2004)
                     /gene="gloB"
                     /locus_tag="QEL58_001562"
     CDS             complement(1240..2004)
                     /gene="gloB"
                     /locus_tag="QEL58_001562"
                     /EC_number="3.1.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyacylglutathione hydrolase"
                     /protein_id="HDS1676042.1"
                     /translation="MRLTALPAFADNYIWTLIDDDGAAVVVDPGDAAPVLALADQGLR
                     VDTILLTHHHDDHIGGVPALQARFPGVRVIAPVEERIPTATARVGEGERVQALGRMFH
                     VLSVPGHTRSHIAFHTAEHLFSGDSLFSLGCGRLFEGTPSQLLASMRKLGALPAQLLL
                     CCAHEYTVSNAVFARHVDPANAALWQRQEEALAMRRDDRSTLPVTLANEFDCNPFLRV
                     HATPIRASVSAHLGRDVVDDVDVMAGLRHWKDGFRA"
     gene            2016..2660
                     /locus_tag="QEL58_001563"
     CDS             2016..2660
                     /locus_tag="QEL58_001563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676043.1"
                     /translation="MPALQSTRQASQTPWFDSEPAAALRVLERQLLLPQLSVLPAQPW
                     LWIAPSAAWLDDAQLGGRGLRLHRQGHGYAGDTRCALPLPLANESVNAIVLQHVTAAD
                     ADLLLDECERVLMPGGHLWLSSLNPFSPYRTHWRQHGLVVRTPQRIRLLLGRHGLECD
                     DMRYLGPLWRGAGSRRPGGWAPLRAACLFHAEKRTLALPGPKPLPVRWHGTVAT"
     gene            2673..3125
                     /gene="rnhA"
                     /locus_tag="QEL58_001564"
     CDS             2673..3125
                     /gene="rnhA"
                     /locus_tag="QEL58_001564"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HI"
                     /protein_id="HDS1676044.1"
                     /translation="MKTIEIHTDGSCLGNPGPGGWAALLRYKGHERELSGGEAHTTNN
                     RMELMAAISGLETLTEPCNIVLYTDSQYVRQGLTQWMPGWIRKNWKTAGGDPVKNREL
                     WERLHAATLRHQIDWRWVKGHSGDPDNERVDTLARNAAIQIRDSSPVN"
     gene            3130..3861
                     /gene="dnaQ"
                     /locus_tag="QEL58_001565"
     CDS             3130..3861
                     /gene="dnaQ"
                     /locus_tag="QEL58_001565"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012479272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit epsilon"
                     /protein_id="HDS1676045.1"
                     /translation="MRQIILDTETTGLEWKKGNRIVEIGCVELFKRRPTGNNYHQYIK
                     PDCEFEQGAQEVTGLTLEFLDDKPGFAQIADEFLAFIDGAELIIHNAAFDLGFLDNEL
                     SLLGPQYGKITDRCTVIDTLVMARERFPGQRNSLDALCKRLGVDNSHRALHGGLLDAQ
                     ILGDVYIALTSGQEEIGFGLGDEDGGGAGAALQAFDTSKLLPRPRVMATPSELEAHAA
                     RLERLRKKAGHALWDGPKVEEPASA"
     gene            complement(3927..4631)
                     /locus_tag="QEL58_001566"
     CDS             complement(3927..4631)
                     /locus_tag="QEL58_001566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003483822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein phosphatase"
                     /protein_id="HDS1676046.1"
                     /translation="MIEFGHLTHPGMRRELNEDTYYGDTELALWLVADGMGGHACGEV
                     ASALARETIVREIRRGAPLVQAIRTADEEIIRASRRRNDTLPMGTTVVAARVQGNRYE
                     VAWVGDSRAYLWRDGQLAQLSQDHSVVQELVAQGNLTAEQARAHPHRNVVTQALGVTD
                     PAHLNVATTSGELRPGMQLLLCSDGLTEEVDDRGIARTLAFEDASAQECVDTLVAAAL
                     DGGGRDNISVILVRCH"
     gene            4797..4887
                     /locus_tag="QEL58_001567"
     tRNA            4797..4887
                     /locus_tag="QEL58_001567"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:4831..4833,aa:Ser,seq:cga)
     gene            5194..5598
                     /locus_tag="QEL58_001568"
     CDS             5194..5598
                     /locus_tag="QEL58_001568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676047.1"
                     /translation="MTAEILVPVSFGELLDKISILQIKSERIGDEAKLANVRKELSAL
                     EKTWMAHPAAVKDVAKLRADLKEVNEQLWDIEDDIRLKEKAQAFDQGFIDLARSVYLR
                     NDERARIKKAINLALGSAYVEEKSYQDYAQRA"
     gene            complement(5648..6694)
                     /locus_tag="QEL58_001569"
     CDS             complement(5648..6694)
                     /locus_tag="QEL58_001569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005415483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 9 protein"
                     /protein_id="HDS1676048.1"
                     /translation="MASASSSLCLLRLSALGDVTHVVPLVRTLQAARPDTPIHWIIDK
                     VGQKLLDGLPGVTFHAYDKKSGMAGVKELRRQLPPGRFEALLQMQVAFRANLLSAFIP
                     AERRIGYDRSRSKDLHGLFINERIPDRPGIHVLDAIGSFCEPLGLRQTEVSWDLAVPP
                     SAHEWAAAQWQDDGRPVLMISPCSSHVRRNWYADRYAAVANHATQRGWQVVLCGGRSE
                     LERSMADAIQAQLHTPALDLVGKDTLKQLPALLARANLVMTPDSGPMHIANAMGAKVL
                     GLHAASNPNRSGPYSDRRYCVDRYDDAARKYLAKQAADLKWGTKIEFDDVMELITVED
                     GIAAFERYVADHLG"
     gene            6715..7464
                     /locus_tag="QEL58_001570"
     CDS             6715..7464
                     /locus_tag="QEL58_001570"
                     /EC_number="2.7.1.166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019336549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-D-manno-octulosonic acid kinase"
                     /protein_id="HDS1676049.1"
                     /translation="MVAFDANEALTPCREGRGIGAILFDRERLRQAEIGLFSPQHWGS
                     RARPVGEGGRGSAWFIDAPFGASVLRHYLRGGMAARISHDQYLWRGADRTRSFAEFRL
                     MRALREKKLPVPRPLAAFYMREGLRYRAAILMERIEGVRSLADRALVAGRGAPWEETG
                     RLIARFHRAGLDHADLNAHNILFDGSGHGWLIDFDRGVIRIPATAWRERNLKRLLRSL
                     IKLRGERSVEDVQKDYARLRRAYDMAWNRGT"
     gene            7464..8231
                     /locus_tag="QEL58_001571"
     CDS             7464..8231
                     /locus_tag="QEL58_001571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019185789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HDS1676050.1"
                     /translation="MDWSLRFLGVGNASAVELGSPMSVIERDGRPWLTIDCGGEGLTA
                     FKAHYGHMPQALFVTHVHLDHVAGFERLFVDTFFNAHRRGKVRLYVPATVVPLLHKRI
                     GDYPNVLAEGGANFWDAFQLVVVGEAFWHEGVRLEAFPVRHHWPETAYGLRLQGALTW
                     SGDTRPIPEMLARYANDNELIAHDCGLHGNPSHTGVDDLEREYSAELQARMMLYHYAS
                     VADGQALAARGHRVAQPGQCVPLANPTAPHVLAQDPP"
     gene            8228..8617
                     /locus_tag="QEL58_001572"
     CDS             8228..8617
                     /locus_tag="QEL58_001572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012479276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HDS1676051.1"
                     /translation="MSGAGQPADAALAAELEALERALHAPQVRGDRESLAALLDEDFS
                     EIGSSGQCYGRDAALQEIPLEREQVLIESEQYAVWLLAKDLGQVRYRCRYHVDGQAQR
                     WVLRSSLWRRHGQGWRMVFHQGTPEAR"
     gene            complement(8696..8792)
                     /gene="ffs"
                     /locus_tag="QEL58_001573"
     ncRNA           complement(8696..8792)
                     /ncRNA_class="SRP_RNA"
                     /gene="ffs"
                     /locus_tag="QEL58_001573"
                     /product="signal recognition particle sRNA small type"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00169"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00169"
     gene            9093..9410
                     /gene="sugE"
                     /locus_tag="QEL58_001574"
     CDS             9093..9410
                     /gene="sugE"
                     /locus_tag="QEL58_001574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014036161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quaternary ammonium compound efflux SMR
                     transporter SugE"
                     /protein_id="HDS1676052.1"
                     /translation="MAWIYLLFAGLLEIVWAVSMKQSEGFTRLTPTVVTIVGMIASFW
                     LLAIAMRSLPLGTAYTIWTGIGAVGAFVVGIVFLGEQVSPMRIGAAVLIVFGLVLMKL
                     SSS"
     gene            9777..20663
                     /locus_tag="QEL58_001575"
     CDS             9777..20663
                     /locus_tag="QEL58_001575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012479277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter-associated beta strand
                     repeat-containing protein"
                     /protein_id="HDS1676053.1"
                     /translation="MNRIYRLVFNRALGVMQVASEVAQNPGGSAVTAKRPPRLRAHQL
                     AVALVATLASGSAFAACTGTTIVNCDSSTNINNYANPSSGLTLNIASGAVFSVPLLLG
                     GNAVTLSGSNTTVNNAGTIDPFLTGGLSLAAAGLVVGNNTAGGSAITVNNQTGGQIKG
                     IFNIGTLLGFGGQAITAQNAAGGTTTLVNDGAIGMSLLGVGQLADATSVVTYGGAQAN
                     VTNRGSITGRVGLGASTGNTFTNAGTITGSVHLGDSTGGNTFTAVAGSSVVTGGGSAP
                     AGVLAGVTGVKVAAAGTVDAGIGTGAANNTLVLQDNASNNGPASSIGWTNYIGFQKLT
                     VNSGTWNLQGPWSGTGAITLGGGVVNFNSNTSFGTGLFTVTGGSIAASGAGLSLGNNF
                     TLNGGLTLGGAQGFGLGGLLSGTGGLTVNNTGIVTLGAANLFSGGVNLNAGGLVLGNA
                     GALGSGSLTVGGSASLDTTAGFNLANNLVINGGGALNLLGSNALSLNGSISGAGNLTK
                     NGAGTLTLNGANSLTGNFNLAGGALALGAGGSLSPTGAITVGVGTSLDLSAAGNQTIG
                     SLAGLGGSVNLGSRTLTLGGLGNTSYSGTFAAGTGGLVKLGSGVQTLSGVNNLSGGVA
                     LNAGGLLLGNAAALGSGALSVGGNVTLDGTTGALALANTVNLGAGSILNLTGNQALTF
                     NGVIGGTGSLVKNGATTLTLNNANTFSGGLSLAAGGLVLGNAGALGTGALNVGGAVTL
                     DAGSALSVGNGINLGVGGLLNVLGSNALTLGGSIGGTGSLVKNGAATLTLGGANTFTG
                     GLAINAGKVAVGSGGSLAAGGAVSLAGAGADLDISAGGNQTIGALSGIAGSTVTLGGS
                     TLTFGDATNQTFAGVIGGTGGLVKQGTGTQTLSGVNTFSGGLNLAAGGLLLGNNSAIG
                     SGALTVSGNGTLDGSAALNLGNAINLGAALTLPGSQNLTLGGNITGTGSLTKNGASLL
                     TLNGTNTFSGGLTLNAGSLLLGNSGALGSGVLNVGGSASLDSSAALNLANNVALGSGA
                     VLSLPGSQAITLGGVVSGAGGLVKNGASTLTLNGANTFAGGLTLNGGGLMLGNTGALG
                     SGLLGVGANATLDSSVALNLANAIDLDAGAQLSLISNQNTALGGLITGTGGLIKTGTG
                     VLSLNNSNLFSGGLALNAGGLSVGANGALGTGALNIGGNVSLDAGAAVTLANAVNLGA
                     NTLTLPGSNNLTLTGVVGGTGGLIKNGASTLTLSGANTFVGGATVNAGTLALGAGGSL
                     AAGGAVDLAGAGATLDISAAGANQTIGALNGVAGSQVALGTQSLTFGGASNGSFAGVI
                     DGSGGLVKTGTGVQTLSGANTFGGGVALNAGGLVLGNAGALGAGALAIGGTTTLDNTV
                     AVNLANAVNFGNGTQLTLGGSNDVTLGGVVAGNGSLVKNGAGLLTLNNTNTFGGGLTL
                     NGGGLVVGANGALGGGALAVNASTTLDAGAGVSLGNAINLASGVALTLPGSNTLTLSG
                     VIDGNGSLVKNGATTLTLSAANTYTGGTTINDGTLALGLGGSLAAAGDVTLGNAGAAF
                     DISGAGGSQTIGALNGVGGTTLALGGNSLTFGTASNAAFGGVISGSGGLVKVGAGVQT
                     LSGASTFGGGVTLNAGGLVLGNDAALGTGTLTVGGASTLDTTGLATLANNIALNAGLT
                     VLGTNALTLNGVLSGAGSLTKEGGATLTLNGANTYTGGTNINAGTLALGANASLSATG
                     TVNLATGATLDLSAGNGTQQFGTLIGNGTINLGANAIEVGGATNGTFSGSITGTGGLT
                     KVGAGTETLTGTNTYTGGTLINAGTLAIGPGGSLAATGAVTLAAPGTGFDISTSGADQ
                     TIGSLAGVAGSSVSLGAQSLILGGVANSVFDGAISGTGGLVKNGAGVLSLGGTNLFSG
                     GIALNGGGLVVGNNAALGSGALTVGGNATLDASTGVNLANNIGLAAGVNLDLLGSNAL
                     TLGGVISGSGGLIKNGAATVTLTGANTYTGVTTINSGTLAIGAGGSLASTGAVNLAGT
                     GTLDISAGNQTIGSLAGVAGSTVALGGSTLSLGGTVDSTFNGAISGNGGLIKNGAGVQ
                     TLNGASTFNGGVTLNAGGLVLGNDAALGTGAVTVGGNATLDSNTAVTLANNVILNSGL
                     TVLGSNNLTFNGNLSGAGSLTKEGAATLTLNGTNSYTGGTFINAGTLALGAGASLHAG
                     GVVNLASGATFDLSAGNGTQTFGTLIGNGTVNLGANTLTIGDASNGTFSGSIGGTGGL
                     VKEGSGTETLTGTNTFTGGTTINAGTLAIGAGGSLAATGAVTLANAGTAFDISAGGAQ
                     TIGSLAGVAGSTVSLGGSTLTLGGVGNTTFAGDITGTGGLVKNGAGVQTLSGNNTFSG
                     GVALNAGGLALGNNNALGTGTLTVGGNTTLDGTTALTLANGIQLASGTLTLPGSNALT
                     LNGAIGGAGGLLKDGASTVTLGGASTYTGTTTINSGTLAVAAGGSLSGASTVNLAGTG
                     TLDISAGGNQSIGGLAGVTGSSVLLGGATLSTGGNNGNTTFGGVLSGTGGLVQGGTGT
                     LTLTGSNTYTGGTTINGGSTLQIGNGGTTGSVLGDITNNGSLVYNLGTTATVGGVVSG
                     SGGLTQAGSGTLVLTGNNTYTGGTTINAGGTLQVGNGGATGAIVGDISNNGALVSNVA
                     GNTTLGGTISGSGGLTQAGSGTLTLTGNNTYTGGTTINTGGTLQVGNGGATGAITGNV
                     ANNGSLVFDVAGNTTVGGAISGSGGLTQAGSGVLTLVGNNTYSGGTTINAGGTLQVGN
                     GGASGAITGDITNNGALISNVAGNTLLGGTISGSGGLTQTGSGTLVLTGTNTYTGGTT
                     INTGGTLQLGNGGATGSIVGDITNNGSLVSGVAGNTTLGGTITGSGGLTQAGSGTLTL
                     TGNNTYTGPTTINAGGTLQVGNGGATGAIGGSVTNNGSLVFNVGGNTTVGGAISGSGG
                     LTQAGSGTVTLTGNNSYTGGTTINAGGTLQVGNGGASGAITGNVANNGSLVLNVGGNT
                     TVGGTISGSGGLTQAGSGTVTLTGNNTYTGGTTINAGGTVQVGNGGASGSITGNITNN
                     GGLVINTGGTTTLGGSISGGGSIVQAGPGGLNLGGNSGGFSGTGQVTGGGLNVTGTIG
                     GQWTIGSGTGLSGTGTIGGTGGGVTVSSGGVLSPGNGPGNGSGTGNGVGTITIGGNLT
                     LSPGSTLGIDLGATGSDTVQVGGSANVGGSTVQVNTISPSTSYQQGQQYTVVNAGGGV
                     SGQFAAATTPSAFLTVTPVYTANTSNLKIDVAQTAAFTTVAKTRNQYNTAAALDSLPQ
                     SGPALGLYNTLLMYDAGTARSAFDQLSGEVHAASRAVLLYDNYLEEGIRQRLGSELPT
                     VRGERASAWLAGSGKVFKQDGDGNGDEIRSNRNAVMAGVDWQLGEHVVLGAAAGSERL
                     DTRLYDRNSRARLRGTTFGLYAQGEWNNGFAVGGSVSRGDYRTRTTREVPLLGQTLHS
                     RQDSDVTIAQVEGSWTWTHGRTQLQPYVQFTKHWVDSDRATEQGGSAALVLEGGKDTL
                     NVSTVGVRGRWDVGSGERFPAQLTVGLGWQHASGDTDVASRNRFAVGGDAFDVYSAVM
                     ARNALVSQVGVAVGLGRNSQLSMFVQGQHGDGRRDVGGQINLRVGF"
     gene            complement(20721..21164)
                     /locus_tag="QEL58_001576"
     CDS             complement(20721..21164)
                     /locus_tag="QEL58_001576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005415487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDS1676054.1"
                     /translation="MKLRLYRPTDASACLSIFDSNVPTFFAAEERSDFERFLLVQAVD
                     FAFQVIERDSSVIACGGITRRGDGSAGFCWGMVERALHRQGIGRELTLARLRQAEADS
                     SITHITLSTSQHTQGFYAGLGFYVTRVVPDGHGAGIDAVEMERRV"
     gene            complement(21247..22368)
                     /locus_tag="QEL58_001577"
     CDS             complement(21247..22368)
                     /locus_tag="QEL58_001577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3667 domain-containing protein"
                     /protein_id="HDS1676055.1"
                     /translation="MSSTDTAHAACENCDTALHGHYCHRCGQSAHNPLKHVGHAIEEV
                     FESFWHLDGRIFRTLRDLWVPGRIALNYLKGRRVGYVQPLRLFVILTLFTFFVGKLFV
                     HVDDFGVGGGRDSVYAKATTVEQVEAARARQLALIDQQQASSPATGNAGFAMAKAAVN
                     AAAAQRKAELEGTRSVAPAETTTGGYGTFFDHTVNGKPWDADSNPIVLDGWPQFANRW
                     LNKRLQNGNTNIKRMGGKADLYMQAILTALPGALFFLMPVFALVLRIAYLRRPMGYLE
                     HLVVALYSHCWLMMVLLATFLVAGISNAFASPTIATLSQWLYALLWLAVPVYLLWMQQ
                     RVYGGNKAFTVLRYLAIGGVYLFLVTFVVMYAVLAGISA"
BASE COUNT         3839 a         7255 c         7898 g         3589 t
ORIGIN      
        1 ccgagcatgg gctcggctcc aagggcagtg cctggctggc gcgtcagtct tcgacgcgca
       61 gcaccgcacc gggcttcagc acgctgctgc cgctcaggcc gttgagcgag agcagggcct
      121 tcaccggcat gccgtagcga cgggcgatgg tccaggccga ctcgccatca cgtacggtgt
      181 ggcgacggct gcgcgggcgg tcggcgattg cggcaacggt cttggcggcc gtcggcgtgg
      241 gcacagcagt ggccgccggg accgcgctgg cgaccagcgc ggtcgccgcc tccgtgaccg
      301 tcgcattggc ggccgagacc ggcgccagta cgcgggtggt gcccgaggcg cggccaccgg
      361 atgccagggc cgggttgagc cgggcgatct tcgccgggtc cagggcgcgc tgtgcggccc
      421 actgctggac gctggtgccg gccggcaggg tgtggtcctt cagcaccggc acggtgcggt
      481 ccagcgaggc catcacgccg ggctggtctt ccacgtcttc cagcacgcag gccagggcat
      541 gcagcttctc gacgtaggca tgggtgaccg gggacaggcc cggcaatgcc gagggcttgg
      601 cgttctgcgc attcatgccg gccttgcgca tggactgcag cacgcggtac tcgccggcgt
      661 tgtaggccat ggtggccagg cgccagtcgc cgccgaacat gccgtgcagg gtcttcaggt
      721 agcgcaccgc ggcctgggtc gaatcgacgg ccgacaggcg gccgtcatag ccgttggcca
      781 tcggcacgcg atggttgcgc gcggtggtgg cgatgaactg ccacaggccg gtcgggccgc
      841 tgccgttgcg ggcgttgggc cgatagccgc tttctacgaa cggaatcagt gcgaattcgg
      901 taggcaggtt ggccttgcgc agctcttcga ccacgtagcc gaacagcacc agcgcatcgt
      961 catcctggtt ggccaggcgc gacggggcgt gggcgaactg cttctgccag cgcgggctgg
     1021 tggcctcggc gtcacagctg ggttcggcca ggccgtcgcg gaagctggtg aagatctcct
     1081 ggccattgcg taccgaggcg gccggcagcg tggacggatc cagcggcagc gccgcggcag
     1141 cggtcaggtt ctggctgatg ccggcgccca gcgactgcgc gcccgcggtt ccggccagcc
     1201 ccagggcaag gcccagggcc agcggcagac ttcggcgcat catgcgcgga agccgtcttt
     1261 ccaatgccgg agaccggcca tcacgtcgac gtcgtccacg acgtcacggc ccaggtgtgc
     1321 cgataccgac gcacgaatcg gcgtcgcgtg cacacgcagg aagggattgc agtcgaattc
     1381 gttggccagg gttaccggca gggtggaacg gtcatcgcgg cgcatggcca aagcctcctc
     1441 ttggcgctgc cacagggcag cgttggcggg gtcgacatgc cgcgcgaaga cggcatttga
     1501 cacggtgtac tcatgagcgc aacaaagcag cagttgcgcg ggcaaggcac ccagcttgcg
     1561 catcgatgcg agcagctggg acggcgtacc ttcgaacaga cgtccacagc ccaggctgaa
     1621 caacgaatct ccgctgaaaa gatgttcagc agtgtgaaac gcgatgtggc tgcgggtatg
     1681 cccgggcacg gatagtacgt ggaacatccg gcccagtgcc tgaacgcgtt caccttcgcc
     1741 gacccgtgcg gtggccgtgg ggatgcgctc ctcgacgggg gcgatcaccc gcacgccggg
     1801 aaaacgggcc tgcagcgcgg gcacgccgcc gatgtggtcg tcgtggtggt gggtgagcag
     1861 gatcgtgtcc acgcgcaggc cctgatcggc cagcgcgagc accggcgcag catcgccggg
     1921 gtcgacgacc acggcggcgc catcgtcgtc gatcagcgtc cagatgtagt tatccgcaaa
     1981 tgcgggcagg gcagtcagtc gcatagaatt ggaccatgcc cgcgctgcag agcacccgtc
     2041 aagcgagcca gaccccgtgg ttcgacagtg aaccggcggc ggcgttgcgc gtgctggagc
     2101 ggcaattgct gctgccgcag ctgtcggtgt tgccggccca gccctggttg tggatcgcgc
     2161 cgagtgcggc ctggctggac gacgcacagc tggggggacg cggcttgcgc ctgcaccggc
     2221 aggggcacgg ctatgccggt gatacccgct gcgcgttgcc gctgccgttg gccaacgaga
     2281 gcgtcaacgc gatcgtgctg cagcatgtca ccgccgccga tgccgacctg ctgctcgacg
     2341 agtgcgagcg cgtgctgatg ccgggcggcc acctgtggtt gagcagcctc aacccgttca
     2401 gcccctaccg cacgcattgg cgccagcacg ggctggtggt gcgtacgccg cagcggatcc
     2461 gcctgctgct cggccggcat ggcctggaat gcgacgatat gcgttacctc ggcccgctct
     2521 ggcgcggcgc cggcagccgc cgcccgggcg gttgggcgcc gctgcgcgcg gcctgcctgt
     2581 tccatgctga aaagcgcacg ctggccctgc cggggccgaa accgttgccg gtgcgttggc
     2641 acggcaccgt tgctacctga tctggagttg tattgaaaac catcgaaatc cacaccgacg
     2701 gttcctgcct tggcaatccc ggccccggcg gctgggctgc gctgctgcgc tacaagggcc
     2761 atgagcgcga actgagtggc ggcgaagcgc ataccaccaa caaccggatg gagctgatgg
     2821 cggccatttc cgggctggag acgctgaccg agccctgcaa catcgtgctc tacaccgact
     2881 cgcagtatgt gcggcagggc ctgacccagt ggatgccggg ctggatccgc aagaactgga
     2941 agaccgctgg cggcgacccg gtgaagaacc gcgagctgtg ggagcgactg catgcggcca
     3001 cgctgcggca ccagatcgac tggcgctggg tgaaaggcca ctccggcgat ccggacaatg
     3061 agcgggtgga taccctggcg cgcaacgcgg ccatccagat ccgcgactcc agcccggtaa
     3121 actgagccca tgcgtcagat catcctcgat accgaaacca ccggcctgga atggaagaag
     3181 ggcaaccgca tcgttgaaat cggctgcgtg gagctgttca agcgccgccc caccggcaac
     3241 aactaccacc agtacatcaa gccggactgc gagttcgaac agggcgcgca ggaagtcacc
     3301 gggctgaccc tggagttcct cgacgacaag cccggtttcg cgcagatcgc cgacgagttc
     3361 ctggccttca tcgatggcgc cgagctgatc atccacaacg cggcattcga cctgggcttc
     3421 ctcgacaacg agctgtcgct gctggggccg cagtacggga agatcaccga ccgctgcacg
     3481 gtcatcgata ccctggtgat ggcgcgcgag cgcttccccg gccagcgcaa ctcgctggat
     3541 gcactgtgca agcggctggg cgtggacaac tcgcaccgtg cattgcacgg cggcctgctc
     3601 gatgcgcaga tcctgggcga tgtctacatt gcgctgacct cgggccagga agagatcggc
     3661 ttcggcctgg gcgatgagga cggcggtggc gcaggtgcag cgctgcaggc gttcgatacc
     3721 agcaaactgc tgccgcgccc gcgggtgatg gcgacgccat cggaactgga ggcgcacgct
     3781 gcgcggctgg agcggctgcg caagaaggcc ggccacgcgc tgtgggatgg cccgaaggtg
     3841 gaggaacccg ccagcgcgta acgcgcggcg gtagtgccgg ccgctggccg gcatcgcccc
     3901 atccacgcat ggcgtggatc tacgggctaa tggcagcgca ccaggatcac gctgatgttg
     3961 tcgcggccgc cgccatcgag cgcggcggcg accagcgtgt ccacgcattc ctgcgcgctg
     4021 gcgtcctcga acgccagggt gcgggcgatg ccgcggtcgt ccacttcctc ggtgaggccg
     4081 tcactgcaca gcagcagctg catgcccggg cgcagctcac cgctggtggt ggccacgttc
     4141 agatgcgccg gatcggtcac gcccagggcc tgggtgacca cgttgcgatg cggatgcgcg
     4201 cgcgcctgtt cggcggtcag gttgccctgc gcgaccagtt cctgcaccac gctgtgatcc
     4261 tggctgagct gggccagctg gccatcgcgc cacaggtagg cacggctgtc gcccacccac
     4321 gccacttcat agcggttgcc ctgcacgcgc gcggcaacga cggtggtacc catcggcagg
     4381 gtgtcgttgc gccgccgcga ggcgcggatg atttcttcgt cggcggtgcg gatggcctga
     4441 accagcggcg cgccgcggcg gatttcgcgc acgatggttt cgcgcgccag cgcactggct
     4501 acttcaccgc aggcatgccc gcccatgcca tcggccacca gccacagggc cagctcagtg
     4561 tcaccgtagt aggtgtcctc gttgagctcg cggcgcatgc cggggtgggt gaggtgtccg
     4621 aattcgatca tggtgggcag gggcggggta atgctgggga gacgggcatc atcgggcggc
     4681 tgcaggcatc cggcaaggcg tgcgctcagg aaattttcac ttgattggcc gcaatgactt
     4741 gtcgtcggcc tcacttcctc gtatgatgcg cgtccccggt ccgccgggga ccacccggag
     4801 aggtggcaga gtggttgaat gtacctgact cgaaatcagg caggcgttta tagcgcctcg
     4861 ggggttcgaa tccccccctc tccgccagat aaagaaaaag ggctgccgaa aggcggccct
     4921 ttttctttat ctggggtggg acgcgccgcg ctctgcgcgt cgctccacac gttgctgcgc
     4981 aacctgtggg cccctccctt tgccggtctc tccccgcccc tgtcggggca gcccctcaac
     5041 agaggggctt gttcctccag atgcatcggt agatccacgc catgcgtgga ggctgttcct
     5101 gccgagctga accatccacg catggcgtgg atctacccat tccgtcgcga gctgcgggtt
     5161 aaactgcctg catcaactgc tggagctttc cccatgaccg ctgaaatcct cgtgcccgtt
     5221 tcctttggcg agctgctgga caagatctcg atcctgcaga tcaagtccga gcgcattggc
     5281 gacgaggcca agctggccaa tgtgcgcaag gagctgtcgg cgctggagaa gacctggatg
     5341 gcacacccgg cggcggtgaa ggacgtcgcc aagctgcgcg ccgacctgaa ggaggtcaac
     5401 gagcagctgt gggacatcga ggacgacatc cggctgaagg agaaggcgca ggcgttcgac
     5461 cagggcttca tcgacctagc gcgcagcgtc tacctgcgca acgacgagcg cgcgcgtatc
     5521 aagaaggcga tcaacctggc gctcggttcg gcctacgtgg aagagaagtc ctaccaggat
     5581 tacgcgcagc gcgcgtaatc ccggccaagg ggggcagatc cacgccatgc gtggatgggc
     5641 ctgccactta ccccaggtgg tcggcgacgt agcgctcgaa ggcggcgatg ccgtcttcga
     5701 cggtgatcag ttccatcaca tcatcgaact cgatcttggt gccccacttc agatcggcgg
     5761 cctgcttggc gaggtacttg cgcgcagcgt cgtcgtagcg atccacgcag taacggcggt
     5821 ccgagtacgg gccgctgcgg ttcgggttgc tggccgcgtg caggcccagc accttcgcgc
     5881 ccatcgcgtt ggcgatgtgc atggggcccg aatccggcgt catcaccagg ttggcgcggg
     5941 cgagcagggc gggcaactgc ttgagcgtgt ccttgccgac caggtccagt gccggtgtgt
     6001 gcagctgcgc ctggatcgcg tcggccatgc tgcgctccag ctcgctgcgg cctccgcaca
     6061 gcaccacctg ccagccgcgc tgcgtcgcat ggttggctac cgcagcgtag cgatcggcat
     6121 accagttgcg gcgcacgtgg ctggaacacg gcgagatcat cagcaccggg cggccatcgt
     6181 cctgccactg cgcagcggcc cactcatggg cagacggtgg cacggccagg tcccagctga
     6241 cctcggtctg gcgcaggccc agcggctcgc agaagctgcc gatggcatcg agcacgtgga
     6301 tgccaggacg gtcggggatg cgctcgttga tgaagagccc atgcagatcc ttggaacggc
     6361 tgcggtcgta gccgatgcgg cgttcggcgg gaatgaaggc cgacagcagg ttggcccgga
     6421 acgcgacctg catctgcagc agcgcttcga agcgtcctgg cggcagttgc ctgcgcagtt
     6481 ccttgacgcc ggccatgccg ctcttcttgt cgtaggcatg gaaggtgacg ccgggcaggc
     6541 catcaagcag cttctggccg accttgtcga tgatccagtg aatcggcgtg tccggacgcg
     6601 cagcctgcag cgtgcgcacc aagggcacca cgtgggtgac atcgccgagt gcggacaggc
     6661 gcaggaggca caaggaggag gacgctgatg ccatgtgttg ttagactcaa tgaaatggtc
     6721 gcattcgacg ccaatgaagc gctgacgcca tgccgcgagg gtcgcggcat cggggccatt
     6781 ctgttcgacc gcgagcggct gcggcaagcc gagatcggcc tgttctcgcc ccagcattgg
     6841 ggcagcaggg cccgcccggt gggtgaaggc ggtcgtggca gcgcctggtt catcgatgcg
     6901 ccgttcggcg ccagcgtgct gcgccactac ctgcgcggcg gcatggcggc ccggatcagc
     6961 cacgaccagt acctctggcg cggcgcggac cgcacccgca gctttgccga gttccggctg
     7021 atgcgcgcgc tgcgcgagaa gaagctgccg gtgccccggc cactggcggc cttctacatg
     7081 cgcgagggcc tgcgctaccg ggccgcgatc ctgatggagc ggatcgaggg cgtccgctcg
     7141 ctggccgacc gcgcgctggt cgccggccgg ggcgcaccgt gggaggagac cgggcggctg
     7201 atcgcccgct tccaccgtgc cggcctggac catgccgacc tcaacgcgca caacatcctg
     7261 ttcgatggca gcgggcacgg ctggttgatc gacttcgacc gcggggtgat ccgcatcccg
     7321 gccactgcct ggcgtgaacg caatctcaag cgactgctgc gctcgctgat caagctgcgc
     7381 ggcgagcgca gcgtggaaga cgtgcagaag gattacgcgc ggctgcgccg cgcctatgac
     7441 atggcctgga accggggcac ctgatggact ggtcgttgcg tttccttggc gtcggcaatg
     7501 cgtcggcggt cgagctgggg tcgccgatgt cggtgatcga gcgcgatggc cgtccgtggc
     7561 tgaccatcga ttgcggcggt gaaggcctga ccgcgttcaa ggcgcactac gggcacatgc
     7621 cgcaggcact gttcgtcacc catgtgcacc tggaccacgt ggccggcttc gaacggttgt
     7681 tcgtggacac cttcttcaac gcgcaccggc gcggcaaggt gcgcctgtat gtgcccgcca
     7741 cggtggtgcc gctgctgcac aaacgcatcg gcgactaccc gaacgtgctg gccgagggcg
     7801 gtgccaactt ctgggatgcc ttccagctgg tcgtggtggg tgaggcgttc tggcacgaag
     7861 gcgtgcgcct ggaggcgttc ccggtgcgcc accactggcc ggagacggcc tatggcctgc
     7921 gcctgcaggg cgcgctgacc tggagtggcg atacccggcc gattccggag atgctggccc
     7981 gctacgccaa tgacaacgaa ctgatcgccc acgactgcgg cctgcacggc aatccgtcgc
     8041 ataccggcgt ggacgacctg gagcgcgagt acagcgcgga acttcaggcg cggatgatgc
     8101 tctaccacta cgccagcgtg gccgatggcc aggcgctggc cgcgcgcggg caccgcgtgg
     8161 cgcagccggg gcagtgcgtg ccgctggcca atcccactgc gccgcacgtg ctggcccagg
     8221 acccgccgtg agcggtgccg gccagcccgc cgatgcggcg ctggctgccg aactggaggc
     8281 gctggagcgc gcgctgcatg cgccgcaggt gcgaggcgat cgcgagtccc ttgcggccct
     8341 gctggacgag gatttcagcg agatcggcag ttccgggcaa tgctacggcc gtgatgcggc
     8401 gttgcaggag atcccgctgg agcgtgagca ggtgttgatc gagtcggaac agtatgcggt
     8461 gtggctgttg gccaaggatc tgggccaggt gcgctaccgc tgccgttatc acgtggatgg
     8521 ccaggcgcag cgctgggtac tgcgcagttc actgtggcgc cggcacgggc agggatggcg
     8581 gatggtgttc caccagggga cgccggaggc acggtagtgc cgggtcgtgc ccggcgaacg
     8641 gcgccaacca aggttggcag ctaccagagc gggggcatcg ccggaaaagg cgatggcccc
     8701 gccggctgac ctcggcgccc gcgtcgatcg ataccgttgc tgccttccgg ccctggcgga
     8761 gttttcgacc tagcgtcgcg aggggccgac ggggccacca tagagacgtt ggccgcccgg
     8821 tgggcggcca gttcacggat caggggaagc agcgcgcgat gcgccggaga ccacagccgg
     8881 actgcacatc agctggctga tggcagacgc gcattctagc gcaggcaggc ccatcggcgc
     8941 cagcttcacg cactgaatcg gctgtaaccc gttcccggca acggcgggcg gggcgcaccc
     9001 ccgttgctag aatgccggcc aggaggaacg acctccccca catcgggacc caatgaccag
     9061 gacggcctgg ccctaccaag aggagggccg tcatggcctg gatctatctg ttgttcgccg
     9121 gcctgctgga aatcgtctgg gccgtgtcca tgaagcaatc cgaaggcttc acccggctca
     9181 ccccgactgt ggtcacgatc gtcggcatga tcgccagttt ctggctgctg gcgatcgcca
     9241 tgcgcagcct gccgctgggc accgcttata cgatctggac cggcatcggt gcggtcggtg
     9301 cgttcgtggt cggcatcgtg tttcttggcg aacaggtcag cccgatgcgg atcggcgcgg
     9361 cggtgcttat cgtttttggc ctggttttga tgaaactctc cagtagctga gagtttatcc
     9421 gggcggttat atgcgcgctc agggtgtttg ccgtgaatag ggaatgtgca ttttcggcaa
     9481 aataaattca ttcacgtatt ttatttgacg cacgtcatga aaataatgtg ggtgattcac
     9541 gcggcactgt cggcgcccgt cgcacagtgc cgccattcgt cgagcggaat cggggagttt
     9601 tcgctccgac ggatacgctg acgcgtcgtc ttcgctgcgc gcccgcgtga agatgtgaag
     9661 attttcagaa gttaatgccg ccaggccttg ttcccccatc gggagccggg atgcgccgca
     9721 tcgtcttcaa aaaacctgcc cgcagtgcca tctggtcttt tcatggagat ttaccgatga
     9781 accgcattta ccgtctggtt ttcaatcgcg cccttggcgt aatgcaggtt gcatcggagg
     9841 tcgctcagaa tcccggcgga agtgcggtta ccgcgaagcg gccaccacga ctgcgggcgc
     9901 atcagctggc ggtcgcactg gtggccacgc tggccagcgg ttcggccttc gcagcgtgca
     9961 caggcaccac gatcgtcaac tgcgacagct ccaccaacat caacaactac gccaacccga
    10021 gcagcggcct gacgttgaac atcgccagcg gcgcggtgtt cagcgtgcct ctgctgttgg
    10081 gcggcaatgc ggtgacgttg agcggcagca acaccacggt caacaacgcc ggcacgatcg
    10141 atccgttcct gaccggtggg ctcagcctgg ccgcggccgg cctggtggtc ggcaacaaca
    10201 ccgccggtgg cagcgcgatc acggtcaaca accagaccgg cggccagatc aagggcatct
    10261 tcaacatcgg tactttgctg ggcttcggcg gccaggcgat aaccgcgcag aatgccgcag
    10321 gtgggaccac cacgctggtc aatgatggtg cgattggaat gtcgctgctg ggggtagggc
    10381 agcttgcgga tgcgacgtcg gtggtgacct atggcggggc acaggccaac gtgaccaacc
    10441 gtggcagcat caccggccgt gtcggcctcg gtgcttcgac aggcaatacg ttcaccaatg
    10501 cgggcacgat caccggcagt gtgcatctgg gcgattccac cggcggcaat accttcactg
    10561 ccgtggcagg gtccagcgtg gttaccggtg gcggcagcgc ccctgccggc gtgctcgctg
    10621 gcgtaaccgg ggtgaaggtc gcagcggcgg gcacggttga cgcaggcatc ggcaccggtg
    10681 ccgccaacaa caccctggtg ctgcaggaca acgccagcaa caacgggcct gcgtcgagca
    10741 taggctggac caactacatc ggattccaga agctgaccgt caacagcggc acctggaacc
    10801 tgcagggacc gtggtcgggc acgggcgcga tcaccctcgg cggtggcgtg gtgaacttca
    10861 acagcaacac ctcattcggt accggcctgt tcaccgtcac tggtggttcg attgcggcga
    10921 gcggtgcggg gctgtcgctg ggcaacaatt tcaccctcaa tggcgggctg accctgggcg
    10981 gtgcccaggg cttcggcctg ggggggctgt tgtccggtac cggcgggctg acggtcaaca
    11041 acaccggcat cgtcaccctg ggcgccgcga acctgttcag cggtggcgtc aacctcaatg
    11101 ccggcggcct ggtgctgggc aatgccggcg cgctcggcag cggcagcctg accgtcggtg
    11161 gtagcgcctc gctggatacg acggccggct tcaacctggc caacaacctg gtgatcaatg
    11221 gtggcggcgc gctgaacctg ctgggcagca atgcgttgtc attgaacggc tcgatctccg
    11281 gtgccggcaa tctgaccaag aacggtgccg gcaccctgac cttgaacggc gccaattcgc
    11341 tgaccggcaa tttcaacctg gccggaggcg cgttggcact gggcgcgggc ggctccctgt
    11401 cgcccaccgg cgcgatcacg gtcggcgtcg gcaccagcct tgacctgtct gcagcgggca
    11461 accagaccat cggttcgctg gctgggctcg gcggctcggt caacctcggc agccgcacgc
    11521 tcacgctcgg cgggctgggc aataccagct acagcggcac cttcgccgca ggcacgggtg
    11581 gcctggtcaa gctcggctcc ggcgtgcaga ccctgtcagg cgtcaacaac ctcagtggcg
    11641 gcgtggcgct caacgccggt ggcctgttgc tgggcaacgc ggctgcgctg ggcagcggtg
    11701 cgctcagcgt cggcggcaac gtgacgctgg atggcaccac gggcgcgctt gcgctcgcca
    11761 acacggtcaa tctgggggcg ggcagcatcc tcaacctgac cggcaaccag gcgctgacgt
    11821 tcaacggcgt gatcggtggg accggcagcc tggtcaagaa tggtgccacc accctgaccc
    11881 tcaacaacgc caacaccttc agtggtgggc tgtcacttgc tgccggtggc ctggtgctcg
    11941 gcaatgccgg tgcgctcgga accggcgcac tgaacgtcgg cggtgcggtg acgctggatg
    12001 caggctctgc gctgagcgtg ggcaatggca tcaaccttgg cgtgggcggg ctgctgaatg
    12061 tgctgggcag caatgcgctg accctgggcg gttccatcgg tggtaccggc agcctggtca
    12121 agaacggagc ggccacgctg acgctgggtg gtgcgaatac cttcaccggt ggcctggcga
    12181 tcaacgcggg caaggtggcg gtgggcagcg gcggaagcct ggccgccggc ggtgcggtca
    12241 gcctggccgg tgccggcgcg gacctggata tttcggccgg aggcaaccag accatcggtg
    12301 cgttgtccgg cattgccggc agcaccgtga ccctgggcgg cagcacgctc accttcggtg
    12361 atgccaccaa ccagacgttc gccggggtga tcggtggcac cggcggcctg gtcaagcagg
    12421 gaaccggcac gcagacgctg agcggcgtca atacgttcag cggtggcctg aacctggcgg
    12481 cgggcggcct gctgctgggc aacaacagtg caatcggcag tggcgcgttg accgtcagcg
    12541 gaaacggtac gctcgatggc tcggccgcac tgaacctcgg caacgccatc aacctgggtg
    12601 cggcgctgac cctgccgggc agccagaacc ttacgttggg cggcaacatc accggcaccg
    12661 gcagcctgac caagaacggt gcctctctgc tgaccttgaa tggcaccaac accttcagcg
    12721 gtggcctgac gctcaacgcc ggcagcctgc tgctcggcaa tagtggcgca cttggcagcg
    12781 gcgtgttgaa tgtgggaggc agcgcgtcgc tggacagcag cgcggcgctg aacctggcca
    12841 acaacgtggc cctcggcagc ggtgcggtgt tgtcactgcc gggttcgcag gcgatcacgc
    12901 tcggcggggt ggtgtccggt gcgggcggtc tggtcaagaa cggtgccagc acgctcaccc
    12961 tcaacggtgc caacaccttc gccggtggcc tgacgctcaa tggcggcggc ctgatgctgg
    13021 gcaataccgg cgcgctcggg agcggcctgc tcggcgtggg cgcaaatgcg accctggaca
    13081 gctcggtggc cttgaacctg gccaatgcaa tcgatctcga tgccggcgcg cagttgagcc
    13141 tgatcagcaa ccagaacact gccctgggcg gcctgatcac gggcaccggc ggcctgatca
    13201 agaccggaac cggcgtgctc tcgttgaaca acagcaatct cttcagcggt ggccttgcgt
    13261 tgaatgcagg tggcctgtcg gtcggcgcca acggcgcgct cggcacggga gcgttgaaca
    13321 tcggcggcaa cgtttcgctg gatgccggcg ctgcggtgac gttggccaat gcagtgaacc
    13381 tgggcgccaa cacgctgacc ctgccgggca gcaacaacct gacactgacc ggtgtggtgg
    13441 gcgggaccgg tggcctgatc aagaacggtg cctcgacgct gacgctgtcc ggagccaaca
    13501 ccttcgtggg cggagccacg gtcaacgccg gtacgctcgc actcggtgcc ggcggcagcc
    13561 tcgccgcagg cggcgccgtg gatcttgccg gtgcgggtgc aaccctggat atctccgcgg
    13621 cgggcgccaa ccagaccatc ggcgcgttga acggcgtggc cggcagccag gttgcgctgg
    13681 gtacgcagtc actcaccttc ggcggcgcca gcaatggcag ctttgccggc gtcatcgatg
    13741 gcagcggcgg actggtcaag accggcaccg gcgtgcagac gctgtccggc gcgaatacct
    13801 tcggcggcgg tgtcgcactg aatgccggtg gcctggttct tggcaacgcg ggggcgctgg
    13861 gagccggggc gctggcgatt ggaggcacca ccacgctgga caacacggtg gcggtgaacc
    13921 tggccaatgc agtgaacttc ggcaacggca cgcagctgac gctgggcggc agcaatgacg
    13981 tcaccctggg cggcgtcgtg gcgggcaacg gcagcctggt caagaacggc gccggcctgc
    14041 ttaccctcaa caacaccaat accttcggcg gtggcctgac cttgaacggt ggtgggctgg
    14101 tggtcggcgc caacggcgca ctgggcggtg gcgcgctggc ggtgaatgcc agcaccacgc
    14161 tggatgcagg tgccggcgtc agcctgggca atgcgatcaa cctcgcctcg ggtgttgcgc
    14221 tgaccctgcc gggcagcaac acgctgacat tgtcgggggt gatcgatggc aacggcagcc
    14281 tggtcaagaa cggtgccacc acgctgacgc tgtccgctgc caacacctat accggcggta
    14341 ccaccatcaa tgacggcacg ctggcactgg gcctgggtgg cagccttgcc gcggcggggg
    14401 atgtcaccct gggcaacgcc ggcgccgctt tcgatatctc cggtgcgggc ggcagccaga
    14461 ccatcggcgc gctcaatggc gtgggtggaa ccacgctggc gctgggtggt aattcgctga
    14521 ccttcggcac cgccagcaac gccgccttcg gtggcgtgat cagtggcagc ggcggcctgg
    14581 tgaaggtggg tgcgggcgta cagactctgt ccggcgcgag caccttcggt ggcggcgtga
    14641 cactcaatgc tggtggcctg gtgctgggca acgacgccgc gctgggtacc ggtacgctca
    14701 ctgtcggcgg tgcgtcgacg ctggacacca ccgggctggc cacgctggcc aacaacatcg
    14761 cgctcaatgc cgggctgacc gtgctcggta ccaacgcgtt gaccctcaat ggcgttctgt
    14821 ccggtgcggg cagcctgacc aaggagggcg gcgcgacgct gaccttgaac ggcgccaaca
    14881 cctacaccgg cggcaccaac atcaacgccg gtacgctggc gctgggcgcc aatgccagcc
    14941 tgtcggcaac cggcacggtc aacctcgcca ccggcgccac gctggacctc tctgcgggca
    15001 acggcacgca gcagttcggc accctgatcg gcaacggcac gatcaacctc ggcgccaatg
    15061 cgatcgaggt gggtggggcg accaatggca ccttcagcgg ttcgatcacc ggtaccggtg
    15121 gcctgaccaa ggtcggtgcc ggcactgaaa ccctgaccgg aaccaacacc tacaccggcg
    15181 gcacgctgat caatgccggt acgctggcga tcggcccggg tggcagcctg gcggcaaccg
    15241 gtgcggtgac gcttgctgca ccggggaccg gcttcgacat ctcgacatcc ggcgccgacc
    15301 agaccattgg ttcgctggcc ggggtggctg gctccagcgt gagcctgggc gcgcagtcgc
    15361 tgatcctcgg cggggtggcc aacagcgtgt tcgacggtgc gatttcaggc accggcggcc
    15421 tggtcaagaa cggagctggc gtcctgagcc tgggcggcac caatctgttc agtggtggca
    15481 ttgcactcaa tggcggcggc ctggtggtcg gcaacaacgc tgcgctcggc agcggcgcgc
    15541 tgaccgtggg cggcaacgcg acgctggatg catcgacagg cgtcaacctg gccaacaaca
    15601 tcgggctcgc cgcgggtgtc aatctggatc tgctgggcag caacgcgctg acgctgggcg
    15661 gtgtgatttc cggtagcggc ggcctgatca agaacggtgc ggctaccgtg accctgactg
    15721 gtgcgaatac ctacaccgga gtcaccacca tcaacagcgg cacgctggcc atcggtgctg
    15781 gtggcagcct ggcgtcgacc ggtgcggtga acctggcagg taccggtacc ctggatatct
    15841 ctgcgggcaa ccagaccatc ggttcgctgg ccggcgtggc aggcagcacg gtggcactcg
    15901 gtggcagcac gctgagcctg ggcggcactg tggacagcac cttcaacggc gcgatcagcg
    15961 gcaacggtgg cctgatcaag aacggtgcag gcgtgcagac gctcaatggc gcgagcacct
    16021 tcaatggtgg cgtaacgctc aatgccggcg gtctggtgct cggcaacgac gctgcgctgg
    16081 gcaccggcgc ggtaacggtg ggtggcaatg ccacgctcga ttcgaacacc gcagtgacgc
    16141 tggccaacaa cgtcatcctc aacagcgggc tgaccgtact gggcagcaac aacctcacct
    16201 tcaacggcaa cctgagtggc gccggctcgc tgaccaagga aggcgccgcg acgctgacct
    16261 tgaacggcac caacagctac accggcggga ccttcatcaa tgccggtacg ctggcgctgg
    16321 gcgcaggcgc cagcctgcac gccggtggcg tcgtcaacct ggcctcgggc gcgaccttcg
    16381 atctgtcggc aggcaatggc acgcagacct tcggcaccct gatcggcaac ggtacggtga
    16441 acctgggcgc caatacgctg acgatcggtg atgccagcaa cggcacgttc agcggttcga
    16501 tcggcggcac cggtgggctg gtcaaggaag gcagcggcac cgagaccctg accggcacca
    16561 acaccttcac cggtggcacc accatcaatg ccggcacgct ggcgatcggc gcgggcggca
    16621 gcctggccgc gaccggcgcg gtgaccctgg ccaatgccgg taccgccttc gacatcagtg
    16681 cagggggcgc gcagaccatc ggctcgctgg ccggcgtggc cggcagcacg gtgtcgctgg
    16741 gtggcagcac gctgaccctc ggtggcgtgg gcaacaccac gttcgctggt gacatcaccg
    16801 gtaccggcgg cctggtcaag aacggtgccg gcgtgcagac gctgagcggc aacaatacct
    16861 tcagcggtgg cgtggcgctc aacgccggtg gccttgccct gggcaacaac aacgcgctgg
    16921 gaaccggcac gctgacggtg ggcggaaaca ccacgctgga cggcaccacg gcattgaccc
    16981 tggccaatgg catacagctg gccagcggca cgctgacctt gcctggcagc aacgcgctga
    17041 ccttgaatgg tgcgatcggc ggtgccggcg gcctgctcaa ggacggtgcc tcgacggtca
    17101 ccctgggcgg tgccagcacc tataccggca ccaccaccat caacagcgga acgctggcgg
    17161 tggcggccgg tggcagcctg tccggtgcca gcacggtcaa cctggccggt accgggacac
    17221 tggacatcag cgccggcggc aaccagagca tcggtggcct ggccggcgtg accgggtcca
    17281 gcgtgctgct gggtggcgca accctgagca ccggcggcaa caacggcaac accacgttcg
    17341 gcggtgtgct cagtggtact ggcggcctgg tgcagggcgg taccggcacg cttaccctga
    17401 ccggcagcaa tacctacacc ggtggcacca ccatcaatgg tggcagcacg ctgcagatcg
    17461 gcaatggcgg caccaccggg tcggtactgg gtgacatcac caacaatggc agcctggtct
    17521 acaacctcgg caccaccgca accgtgggtg gcgtggtcag cggcagcggc ggcctgaccc
    17581 aggccggcag cggcacgctg gtgctgaccg gcaacaacac ctacaccggc ggcaccacca
    17641 tcaatgcagg cggcacgctg caggtcggca atggcggtgc gaccggcgcg atcgtcggtg
    17701 acatcagcaa caacggcgca ctggtgtcca acgtcgccgg caacaccacg ctgggcggca
    17761 ccatcagtgg cagtggcggc ctgacccagg ctggcagcgg cacgctgacc ctgaccggca
    17821 acaacaccta caccggcggt accaccatca ataccggtgg cacgttgcag gtgggcaacg
    17881 gcggtgcgac cggtgcgatc accggcaacg tcgccaacaa cggcagcctg gtgttcgacg
    17941 tggcgggcaa caccaccgtc ggcggcgcga tcagtggcag tggcggcctg acccaggccg
    18001 gcagtggcgt gctgaccctg gtcggcaaca acacctacag cggcggcacc accatcaatg
    18061 cgggcggtac gctgcaggtc ggcaacggcg gtgccagcgg tgcgatcacc ggtgatatca
    18121 ccaacaatgg cgcactgatc tccaacgttg ccggcaacac cctgctgggc ggcactatca
    18181 gcggcagcgg tggcctgacc cagacgggca gcggcacgct ggtactgacc ggtaccaata
    18241 cctacaccgg cggcaccacc atcaataccg gtggcacgct gcagctgggt aacggcggag
    18301 caacgggctc catcgtcggt gacatcacca acaacggctc gctggtgtcc ggcgtggccg
    18361 gcaacaccac gctgggcgga accatcaccg gcagcggtgg cctgacccag gcgggcagcg
    18421 gcacgctgac cctgaccggc aacaacacct ataccggccc gaccaccatc aacgccggtg
    18481 gcacgctgca ggtgggcaat ggtggcgcta ccggcgcgat cggcggcagc gtcaccaaca
    18541 acggcagcct ggtattcaac gtgggtggaa acaccaccgt tggcggtgca atcagcggca
    18601 gcggcggcct gacccaggcc ggcagcggca cggtgaccct gaccggcaac aacagctata
    18661 ccggcgggac cacgatcaac gcgggcggca cgctgcaggt cggcaatggg ggcgccagcg
    18721 gcgcgatcac cggcaacgtc gccaacaatg gcagcctggt gctcaacgtc ggcggcaaca
    18781 ccaccgtcgg cggcaccatc agcggcagcg gcggcctgac ccaggccggc agcggcaccg
    18841 tcaccctcac cggcaacaac acctataccg gtggcaccac catcaatgcc ggtggcaccg
    18901 tgcaggttgg caatggcggc gccagtggtt cgatcaccgg caacatcacc aacaacggcg
    18961 gcctggtcat caacacgggg ggcaccacga cactgggcgg cagcatcagt ggcggtggca
    19021 gcatcgtgca ggccggcccg ggtggcctga accttggtgg caacagcggc ggcttcagcg
    19081 gcaccggcca ggtcaccggc ggtggcctca atgtcaccgg caccatcggt ggccagtgga
    19141 ccatcggcag cggcaccggc ttgtccggca ccggcaccat cggcggtacc ggtggtggcg
    19201 tgaccgtatc cagcggcggc gtgctgtcgc cgggcaatgg cccgggcaac ggcagtggca
    19261 ccggcaatgg cgtcggtacc atcaccatcg gtggcaacct gaccctgtcg ccgggcagta
    19321 cgctgggtat cgatctgggc gccaccggca gtgacacagt gcaggtggga ggcagcgcca
    19381 acgtgggcgg cagcaccgtg caggtgaata ccatttcgcc gagcaccagc taccagcagg
    19441 gccagcagta cacggtggtc aatgcgggcg gtggcgtcag cggccagttc gccgcggcga
    19501 ccacgccgtc ggccttcttg accgtcaccc cggtctacac cgcgaacacc tccaacctga
    19561 agatcgatgt ggcgcagacc gcagcgttca ccaccgtggc gaagacgcgc aaccagtaca
    19621 acacggctgc ggcgctggac agcctgccgc agagcggtcc ggcgctgggc ctgtacaaca
    19681 cgctgctgat gtacgacgcc ggcactgcgc gcagcgcatt cgaccagctc tccggcgaag
    19741 tgcatgcggc cagccgtgcg gtgctgctgt atgacaacta cctggaagaa ggcatccgcc
    19801 agcgcctggg cagcgagttg cccaccgtgc gtggcgagcg cgcttcggcg tggctggccg
    19861 gcagcggcaa ggtgttcaag caggatggcg atggcaacgg cgacgagatc cgttccaacc
    19921 gcaatgcggt gatggccggc gtggactggc agctgggtga gcacgtggtg ctgggcgcgg
    19981 ccgcgggtag cgagcggttg gatacacgcc tgtacgatcg caactcgcgt gcccgcctgc
    20041 gcggtaccac cttcggcctg tatgcacagg gcgagtggaa caacggcttc gcggtgggcg
    20101 gcagcgtgtc gcgcggcgat taccgcacgc gcaccacccg tgaggtgccg ttgctgggcc
    20161 agaccctgca cagccgccag gattcggatg tgaccatcgc ccaggtggag ggcagctgga
    20221 cctggaccca cggcaggacc caactgcagc cgtacgtgca gttcaccaag cactgggtcg
    20281 acagcgatcg tgcgacggag cagggcggca gcgctgcgct ggtgctggaa ggcggcaagg
    20341 acacgctcaa tgtcagcacg gtgggcgtgc ggggccgctg ggacgtgggc agcggcgagc
    20401 gtttcccggc acagctgacc gtcggcctgg ggtggcagca cgcctccggt gacaccgacg
    20461 tggccagccg caaccgcttc gcggtgggtg gcgatgcctt cgacgtctac agcgcggtga
    20521 tggcgcgcaa tgcgctggtc agccaggtcg gcgtggcggt cgggttgggc cgcaacagcc
    20581 agctgtcgat gttcgtgcag ggccagcacg gtgatggccg ccgcgatgtc ggcgggcaga
    20641 tcaacctgcg cgtgggcttc tgaggggagt aggccggcaa tggatccacg cacgccgtgg
    20701 atccggggcg gggcggaggg ctataccctc cgctccatct ccacggcgtc gatcccggcg
    20761 ccgtggccat cgggcaccac ccgtgtcacg tagaagccga ggccggcata gaatccttgc
    20821 gtatgctggc tggtgctgag cgtgatgtgc gtgatcgacg agtccgcttc ggcctggcgc
    20881 aggcgtgcca gcgtcagttc gcggccgatg ccctgccggt gcagcgctcg ctcgaccatg
    20941 ccccagcaga agccggcgct gccatcgcca cggcgtgtga tgccgccgca ggcgatgacg
    21001 ctgctgtcgc gctcgatgac ctggaaggca aagtccaccg cctgcacgag caggaagcgt
    21061 tcgaaatcgc tgcgctcttc ggcggcgaag aacgtgggca cgttgctgtc gaagatcgac
    21121 aggcaggcgc tggcatccgt ggggcggtag aggcggagtt tcatgcgccc acgatagacg
    21181 atcagcagta tcagaagatc cacgccacgc gcggattcag gggtgacacg ccatgcgtgt
    21241 ctcccctcag gccgaaatgc ccgccagtac cgcgtacatc accacgaagg tcaccaggaa
    21301 caggtacacg ccgccgatgg cgaggtagcg cagtacggtg aacgccttgt tgccgccata
    21361 cacgcgctgc tgcatccaca gcaggtacac cggaaccgcc agccacagca gggcatacag
    21421 ccattggctg agcgtggcga tcgtgggtga tgcgaaggca ttgctgatgc cggcgacgag
    21481 gaacgttgcc agcagcacca tcatcagcca gcagtggctg tagagggcga ccaccaggtg
    21541 ctcgagatag cccatcggtc gacggaggta ggcgatgcgc agcaccagtg cgaacaccgg
    21601 catcaggaag aacagggcgc ccggcagtgc ggtgaggatc gcctgcatgt agagatcagc
    21661 cttgccgccc atgcgcttga tgttggtgtt gccgttctgc aggcgcttgt tgagccatcg
    21721 gttggcgaac tgcggccaac catcgaggac gatgggattg ctgtccgcat cccagggttt
    21781 gccgttgacg gtgtgatcga agaaggtgcc gtatccgccc gtggtggttt cagcaggggc
    21841 gacggagcgg gtgccctcga gctctgcctt gcgctgtgcg gcggcagcat tcactgcagc
    21901 tttcgccatg gcgaagccgg cgttgccggt ggcgggggag ctggcctgct gttggtcgat
    21961 cagcgccagc tgtcgtgcgc gtgcggcttc gacctgttcc acggtggtgg ccttggcgta
    22021 caccgagtcg cgcccgccgc ccacaccgaa atcgtcgacg tgcacgaaca gcttgccgac
    22081 gaagaaggtg aacagcgtga ggatgacgaa cagccgcagt ggctggacgt atcccacccg
    22141 gcggcccttg aggtagttca gcgcgatgcg gccgggcacc cagaggtcgc gcagcgtgcg
    22201 gaagatgcgc ccgtccaggt gccagaagga ttcgaacact tcctcgatgg cgtggccgac
    22261 atgcttgagc gggttgtgcg ccgattgccc gcagcgatgg cagtaatggc catgcagggc
    22321 ggtgtcgcag ttctcgcagg cggcgtgagc ggtgtcggtc gagctcatgg gcgatgggcg
    22381 gcattgggtg aaggcgccta cgatagcgaa ttttcaggtt tcgttcagtt ttgtttgagg
    22441 ggccgcggga gtgtgaaagg cgaccaagag catccacgca tggcgtggat ctacggatcg
    22501 gtctggagga acaagcccct ctgttgaggg gctgccccga caggggcggg gagaggccgg
    22561 caaagggagg ggcccaaagg t
//
LOCUS       DAOKIP010000047        21828 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.047,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000047 DAOKIP010000000
VERSION     DAOKIP010000047.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 21828)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21828)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21828
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.047"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            126..494
                     /gene="fliE"
                     /locus_tag="QEL58_001578"
     CDS             126..494
                     /gene="fliE"
                     /locus_tag="QEL58_001578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005997134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-basal body complex protein FliE"
                     /protein_id="HDS1676056.1"
                     /translation="MSHSVTSILSQIRSYQTQVGQSAALNPLAEAPRSNALPGTVLDA
                     PQVQPASFTETLRGAIAGVNDAQQKSGALAKAFEMGDPSADLAKVMVASQQSQIAFRA
                     TVEVRNRLVQAYQDVMNMPL"
     gene            508..2151
                     /gene="fliF"
                     /locus_tag="QEL58_001579"
     CDS             508..2151
                     /gene="fliF"
                     /locus_tag="QEL58_001579"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017158031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar M-ring protein FliF"
                     /protein_id="HDS1676057.1"
                     /translation="MALTLSKDSLNAEKAGQWFDRLQSLQITRRLGLMAMIAVAVAAG
                     LSVFFWSQKPGMVPLYTGLDQKATAEATDLLRAAQIPFALDPATGGITVPEKNLHDAR
                     LKLAGSGLTDSGKLGFELMERDPGFGVSQFVESARYQHALETELSRTINTLRPVRDSR
                     VHLAIPKPSAFTRQRDVASASVTLELRGGQQLERSQVDAIVHMVAASIPDLAPERVTV
                     VDQSGRMLSVSDPNSEAAVNAAQFEQVRRQETSFNQRIRELLEPMTGPGRVNPEVSVD
                     MDFSVTEEARELYNGEPQKLRSEQMSENSTTTPGPQGVPGATSNSPPGQQAAPATAQA
                     PTESSKNATRNYELDRTLQHTRQPAGRIKRVSVAVLVDNVPRAGANGKVAPQPLSAAE
                     LTRVEALVKQAVGFNAERGDTVSVMNAPFVRDTTPVEGPAWWELPWVHDAGRMLLGAV
                     VVLALLFGVLRPALRAITGQKKNDEQALEPHTADVQLVDDDGMPLPALGADRASLGGP
                     DALALPVDSYEERLRMAREAVKTDSKRVAQVVKGWVAND"
     gene            2159..3145
                     /gene="fliG"
                     /locus_tag="QEL58_001580"
     CDS             2159..3145
                     /gene="fliG"
                     /locus_tag="QEL58_001580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017158030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliG"
                     /protein_id="HDS1676058.1"
                     /translation="MTGVQRAAVLLLSLGELDAAEVLRHMEPKEVQKIGIAMATMTDI
                     TREQVERVMDQFGQELGSKTSLGVGSDDYIRNMLVQALGSEKAGNLIDRILLGRNTTG
                     LDALKWMDPRAVADLVRNEHPQIIAIVMAHLETDQAADALKLLPDRTRVDVLLRIATL
                     DGIPPNALNELNEIMERQFAGNQNLKSSNIGGVQCAANILNFMDSGQDQAILGEIARI
                     DAPLSNRIQDLMFVFDDLVDLDDREMQLVLREVSGERLGLALRGADIKVRDKITRNMS
                     QRAAEILLEDMEARGPVRLSDVEGAQREILAIVKRMADEGTVTIGGSAEAML"
     gene            3142..3783
                     /locus_tag="QEL58_001581"
     CDS             3142..3783
                     /locus_tag="QEL58_001581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019338565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar assembly protein FliH"
                     /protein_id="HDS1676059.1"
                     /translation="MSNVVRWLAPDLLAQPEPARAQEDVFELTEPDPEHEPEPPLQLP
                     TLEEIQAIQDSAEKEGFQHGHTEGYGQGQAEVRRLAAQIEGILDNFSRPLVRLENEVV
                     GALGELAVRIAGALVGRAYEAEPALLAQLVGEAIDAVGGSTREVEVRLHPDDIAALAP
                     LLNLSPQQRLVPDTSLSRGDLRVHAEAVRIDGTLEARLRGALDAVIRQTGATA"
     gene            3780..5177
                     /locus_tag="QEL58_001582"
     CDS             3780..5177
                     /locus_tag="QEL58_001582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010485933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FliI/YscN family ATPase"
                     /protein_id="HDS1676060.1"
                     /translation="MSPESQAAPQPAAQPADWAVARNLRLASRLDGLRVDTAHGRGLI
                     REGVLRRAVGLTLEAVGCEAPLGASCKVEVVDGGWVDAEVVGFAGERTYLMPSAELHG
                     LLPNARVVPSARRGGVEVGEGLLGRVIDSDGVPLDGKGPIRAEGHVGMAGVSINPLAR
                     EPITQPLDVGVRAINALLPIGRGQRVGLFAGSGVGKSTLLGMMTRYTAADVIVVGLIG
                     ERGREVRDFVETTLGEEGLRRAVVVASPADRPPLARLHGAYRATAIAEWFRDQGLNVL
                     LLMDSLTRFAQAQREIGLSVGEPPTTRGYPPSVFAKLPALVERAGNGAKGRGSITAFY
                     TVLTEGDDPQDPIADAARAILDGHILLSRRVADSGLYPAIDVESSVSRVVTEIADEPW
                     RLRIRKLKRLVSAYSANRDLIAIGAYQRGNDAATDEALERWPEIMEFLGQDVAKAADL
                     PHSQAALQRLVEQES"
     gene            5181..5648
                     /gene="fliJ"
                     /locus_tag="QEL58_001583"
     CDS             5181..5648
                     /gene="fliJ"
                     /locus_tag="QEL58_001583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010485935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar export protein FliJ"
                     /protein_id="HDS1676061.1"
                     /translation="MNQSKRIDPLLKRAQEHEDAVARDLAERQRVLDTHLSRLDELRR
                     YAEEYANAQMAATSPAQLLNRRAFLDRLDSAVEQQQRTVDGNREKVEAERARLILASR
                     DKAVLEQLAASYRAQEKVVTDRRDQREMDDIGARRARLVQAEDQDGAEQGGRA"
     gene            5648..6805
                     /locus_tag="QEL58_001584"
     CDS             5648..6805
                     /locus_tag="QEL58_001584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-length control protein FliK"
                     /protein_id="HDS1676062.1"
                     /translation="MPAPLSGSASAQPQGSGNGAARTPRADSNKEFSQLLHGGAPAAD
                     APARASSTPTPTTPQGPASDSRGQAGSERNPDTAAAPEDTATVVPAVPAKPLAEKDAS
                     AATEEAPWPPLGLAGLVLAVPLPADPAAAALPAPAVTATDADGVALPATAAQSAAAVV
                     PAAATPAAAATEGKANAASGTEQATTLPLPEMLLPGKRSERSEDGDAPLIGERTAAPL
                     LHAPANAAVQDLKAALAAGNAIFNGEPTPKPVLGDDGFDQAIGARLGWLADQKIGHAH
                     IRLSPDDMGPVDVRLQLNGDKVHASFSSPHVDVRQALENSLPRLRELLGEQGFQLAHA
                     DVGHQAPGGDGNASGPSSGGGRAGDGEPTPGDASVSPAQLIRQRGLLDAYA"
     gene            6934..7449
                     /locus_tag="QEL58_001585"
     CDS             6934..7449
                     /locus_tag="QEL58_001585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body-associated FliL family
                     protein"
                     /protein_id="HDS1676063.1"
                     /translation="MAAAAEKTKKTAEKDKTAKPRSPILITALVAVLAAAAAGGGVWF
                     FTQSKHEEKAAQAPKKTTTPAPAQYFALDPAFVVNLNGPVDGPRYLQLEVQLMTRDPA
                     ALEAIKTHAPAIRARLLMLFSQVSPDQIADIAGKQKLQAASLAEVQKVLKAETGSNGA
                     DDLLFTSFVTQ"
     gene            7460..8464
                     /gene="fliM"
                     /locus_tag="QEL58_001586"
     CDS             7460..8464
                     /gene="fliM"
                     /locus_tag="QEL58_001586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliM"
                     /protein_id="HDS1676064.1"
                     /translation="MNDLLSQDEIDALLHGVDSGAVETDPEPPSGEARSYDFASQDRI
                     IRGRMPTLEMVHERFARLWRIGLFNLIRRSAELSVRGIELIKFNDYMHSLYVPTNLNL
                     IRFKPLRGTGLIVFEPTLVFAIVDNFFGGDGRYPTRIEGREFTATEMRVIHLLLKQTF
                     ADLREAWAPVMDVDFEYINSEINPHFANIVTPREYVVVCRLHVELDGGGGDIHVTLPY
                     SMLEPIRELLDAGIQSDRNDRDESWGQTLREQLNIAEVTLSSVLASKRMTLRDLTRLK
                     VGDVLPIELSPQVPLCVENIPVFTGEFGIANGMNAVKITATHPPGTRPRVPVIQEDPQ
                     "
     gene            8461..8796
                     /gene="fliN"
                     /locus_tag="QEL58_001587"
     CDS             8461..8796
                     /gene="fliN"
                     /locus_tag="QEL58_001587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014507674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliN"
                     /protein_id="HDS1676065.1"
                     /translation="MNDIDALEPTPAQFSSLQADEANGPDLNLDVILDVPVTLSLEVG
                     RARLPIRNLLQLNQGSVVELERGAGESLDVFVNGTLIAHGEVVVINDRFGVRLTDVVS
                     PSERIRRLR"
     gene            8793..9212
                     /gene="fliO"
                     /locus_tag="QEL58_001588"
     CDS             8793..9212
                     /gene="fliO"
                     /locus_tag="QEL58_001588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthetic protein FliO"
                     /protein_id="HDS1676066.1"
                     /translation="MSLLASTLLAVGKTAAPIGPQVGQHAAAAPSLFGAVLALLAVLA
                     LVIGLGWLLKRLPGSGFRPAEGMKLVASLSVGAKERVVVVEVNGQQLLLGVTAGGINT
                     LHTLPEPLPPPAPVRVPDFKNLPNFAQLLQQRLRKDP"
     gene            9214..9993
                     /gene="fliP"
                     /locus_tag="QEL58_001589"
     CDS             9214..9993
                     /gene="fliP"
                     /locus_tag="QEL58_001589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010482439.1"
                     /note="The bacterial flagellar biogenesis protein FliP
                     forms a type III secretion system (T3SS)-type pore
                     required for flagellar assembly; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar type III secretion system pore protein
                     FliP"
                     /protein_id="HDS1676067.1"
                     /translation="MRVTRTRVATLMPWLLLLALCLLPALAFAAPGAPTTPLPDINVG
                     KIGGAPVSLPLQTLLLMTAITLIPSMLLVLTSFTRIIIVLGLLRQALGTGQTPSNQVL
                     LGLALFLTAMVMMPTWDKAWSAGMAPYLNGEIDFQTAWTLTTTPLRGFMLAQIRETDL
                     MTFAGIAGHGTYASPDAIPFPVLVASFVTSELKTAFEIGFLIFIPFVIIDLVVASVLM
                     SMGMMMLSPMLVSAPFKILLFVLVDGWVLTVGTLAASFNPA"
     gene            10053..10322
                     /locus_tag="QEL58_001590"
     CDS             10053..10322
                     /locus_tag="QEL58_001590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011037081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthetic protein FliQ"
                     /protein_id="HDS1676068.1"
                     /translation="MSPELALTELRGGLITVLWVAGPLLLTVLVVGVVVGVVQAATQL
                     NEPTIAFVAKAAALTAVLFALGSLLIGHLVEFTTLLFQRIPHLIG"
     gene            10336..11127
                     /gene="fliR"
                     /locus_tag="QEL58_001591"
     CDS             10336..11127
                     /gene="fliR"
                     /locus_tag="QEL58_001591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008267295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthetic protein FliR"
                     /protein_id="HDS1676069.1"
                     /translation="MDAATQMAADGLQAFGMIGTVLWTMLRIGAVAMAMPMVGTRAVP
                     ARVRVVLAGTLAIALAPLLPPVPEWTGFDAATVLTIARELAIGVAIGFLLRLVFEAGA
                     MAGELIAQGTGLAFAQMSDPLRGGTSGVIGQWFYLLFGLLFFTANGHLALISLVVDSY
                     RALPIGAPLPDPHAFFSIAPTFLLTVLRGALTLAIPLTVAMLAVNLAFGVLARAAPAL
                     NPIQLGLPVSLLLGLFLLALLAGEMGPPVQRLFDAAFQAADAVTR"
     gene            11293..13425
                     /locus_tag="QEL58_001592"
     CDS             11293..13425
                     /locus_tag="QEL58_001592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional diguanylate
                     cyclase/phosphodiesterase"
                     /protein_id="HDS1676070.1"
                     /translation="MLVGTYNPWLVAISLLVAVMASYTALAMAGRTVTAPGKGAAWWW
                     RLGGGFAMGLGIWSMHFIGMLAFNLPIPLGYDLPITLLSLALAIASSVFALWLVSLRT
                     LPHPRLAGGALLMGTGIAGMHYVGMAAMRMRPGIEYDPGWLLFSLMVAVAASWTALYV
                     AFRLRAQRTRVGDRLAAAGLLGLAIVGMHYTGMAAARFPEGSICGAAVGDGLQSEWLA
                     MLVVVLTVAILAVVLVVSWLDQRVEAQLLRLRNSLLSTSLTDAQQELTQAALHDPLTR
                     LPNRLLLQRRIVQALAEAEQGGNRFAVMFMDLDGFKQVNDAYGHQAGDALLVAVAERT
                     RQLLRPHDMLARLGGDEFVLVVRIEHDEDLPTLARRILQAVGSGPLLPDNELQVTASI
                     GVAICPDHAASERQLMAFADAAMYQAKESGRNAFVLFADWMNDSAEQQFRLLADLRRA
                     IGSDQLFLNYQPKIRVATQKVAGAEALIRWRHPEHGLIPPDRFIRLAERSGAINDIGR
                     WALDQACQQLRRWHDAGHEGWSMSVNLSPVQFSSPHLLQDVRSVIERHAIAPRHLVLE
                     ITESTVMRDTDTSLRLLQALSALGVGISIDDFGTGYSSLLYLKRLPATEIKIDHAFVR
                     DLEHSAEDVVIVSAIVALGHALDMDIVAEGVETAAQRAYLERLGCDYLQGYLLGRPVD
                     AARFMQLHDLPRPRVELAQSPPTQHPPG"
     gene            13564..14694
                     /gene="flhB"
                     /locus_tag="QEL58_001593"
     CDS             13564..14694
                     /gene="flhB"
                     /locus_tag="QEL58_001593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FlhB"
                     /protein_id="HDS1676071.1"
                     /translation="MSENESAGEKTEQPTEKRLRDAREQGNLPRSRELGTAAVFGAGV
                     LAVMAMSGSIGRGATAWMKHALSPEQSLRQNPKELFGHFGDLLLQFLLVIAPLVLVCL
                     LASFVAPLVMGGLRWSQKALLPDINRLNPMSGLKRLYGPEAIAEFTKSLLRVAFVGVA
                     AGLVVWTGFDTLRGLIHHPLETAITDGLGFTLRLLLATAGAMLVLAAIDAPYQRWNWM
                     RKLKMTREELRREMKESEGSPEVKGRIRQLQQQMANRRMMEAVPTADVVVVNPTHYAV
                     ALKYEGGAMNAPTVVALGVDETALRIREVADGNKVAIVSAPPLARALYREGQLGKEIP
                     VRLYSAVAQVLSYVYQLRSWRTGPMPDAPHIQVDEFGKGGRP"
     gene            14739..16799
                     /gene="flhA"
                     /locus_tag="QEL58_001594"
     CDS             14739..16799
                     /gene="flhA"
                     /locus_tag="QEL58_001594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014507667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FlhA"
                     /protein_id="HDS1676072.1"
                     /translation="MIRQGLGAPLIVLALLAMVVVPLAAPVLDALFTFNIAISLMVLL
                     AVVYVKRPLDFTIFPIVLLITTMLRLALNVASTRVILLNGQNGHDAAGKVIAAFGEFV
                     IGGNYAVGIVVFAILTIINFVVITKGAGRVSEVTARFILDAMPGKQMAIDADLNAGLL
                     TREEAKARREEVREEADFYGAMDGASKFIRGDAIAGILILFINMLGGLAVGVMQHGMP
                     FGQAAATYTLLSIGDGLVAQLPALLVSSAVAMLVTRASRSQDMAQAMSGQVFGQYRAL
                     AITAGILGLVGLVPGMPNVAFLTLAAILGFIAWKLYRKEKAPAANAAAAGGDAAALNA
                     LGRPAAPAPTAELSWDELRPVDPLGLEVGYRLIPLVDANQGGELMARIKGVRRKLTQD
                     VGFLIPSVHIRDNLELPANGYRVLVHGVPVATAEIHPDRELALDPGSALGALEGIAGK
                     DPAFGLDATWIQPHQRAQAETLGYTVVDPATVVATHLSHLIREHAPELLGHEEVQHLL
                     ANLAKSAPKLVEDLTPKALPLSAVVRVLQNLLVERIPIRQLRKIAEALVEHAPSSQDP
                     AVLTAAVRTALGRFIVQEIAGMSAELPVFTLNPQLERVLQESTQGNGAALEPGLAERL
                     HQSLAECVSKQEARNEPAVVLVPGPVRAALARLVRHSVPSLSVLAYSEVPEDKRLKLV
                     GTIS"
     gene            16945..18546
                     /gene="flhF"
                     /locus_tag="QEL58_001595"
     CDS             16945..18546
                     /gene="flhF"
                     /locus_tag="QEL58_001595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017154801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FlhF"
                     /protein_id="HDS1676073.1"
                     /translation="MKIKRFVAADMRSAMNLVRKEHGPDAVILSNRRIEEGIEIVAAA
                     NYDESAVQRALEASRRDVAPPPAPKPRTAADAVIAAVTRRRSSTPAPEPVAATTSAVA
                     ALARAAVGATGRTLDSADEIVPTRGSTGFAATLARAAVNEPALPEQIFAPFAEAIVAP
                     ANRARFLIDPPHEAHHESPAPAVQPPPLPTAAVADMQPGIAASEPAAVDADAEASPAP
                     VLAPAPTLTVVAPDDAEIRQLRQEVAGMRQVIEREMNRFTDERLRGCPVRATALDLMD
                     EYGFDAGLARDVAMQIPLETEAHRGRGLMLGLISRKLPIAPVDPLEEGGVIALVGPTG
                     AGKTTTIAKLASRFAEKHAPRDVALVTTDTTRIGAREQLYGYGRQLGIAVHEANSGTD
                     LDQLLERLKDYKLVLIDTAGLGPRDRALAAQLQWLRAARQVRTLLVLPANTSFGDMDE
                     VVRRFGAANLQGLVLSKLDETGRFGNALSVAVDHALPITWVTDGQDVPEDLHRASAAN
                     LVLRLEDLRRAADMPCNPELNHAVA"
     gene            18533..19420
                     /locus_tag="QEL58_001596"
     CDS             18533..19420
                     /locus_tag="QEL58_001596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010374294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MinD/ParA family protein"
                     /protein_id="HDS1676074.1"
                     /translation="MPSREYAKLTKTFPLSATRSEPLGPVRTIAVTGGKGGVGKTNVS
                     ANLAVALAGMGKRTLLLDADLGLANIDVILGLNPTFTLADLVAGRCSLEDVIVEGPNG
                     VLVVPAASGRRHMAELAPAEHVGLVNVFSELERELDIMVVDTAAGITDGVLTFCQAAQ
                     DTVVVVCDEPASITDAYALIKVLSRERGVDRIQVVANMVRDPNEGRVLYEKLTRVCEK
                     FLADVSLNYLGCVPQDDWLRLSVQRQQPVVKAYPSSPAALAITEIARRTARWQAPTEP
                     RGGVEFFLERILKQRGVAA"
     gene            19417..20160
                     /locus_tag="QEL58_001597"
     CDS             19417..20160
                     /locus_tag="QEL58_001597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor FliA"
                     /protein_id="HDS1676075.1"
                     /translation="MKGAAQYREVQRSAANEVIAQHSDLVRRIAHHLAARLPASVEVD
                     DLIQAGMMGLIEASRSYDADQGASFETYASIRIRGSMIDEIRRGDWVPRSVHRRARDA
                     AATIRRLEQSSGRAASATEVAAAMEMPLPEYLRLMEDAARGQVLSLESRIEDQGELDT
                     VAQGGPTPQQVLERGEFGRELGKAIGHLPEREQLVLSLYYEQELNLKEIGAVLGVSES
                     RVCQIHGQAVLRLRGRLKIFEAADAGLEE"
     gene            20218..20610
                     /gene="cheY"
                     /locus_tag="QEL58_001598"
     CDS             20218..20610
                     /gene="cheY"
                     /locus_tag="QEL58_001598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014507662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis response regulator CheY"
                     /protein_id="HDS1676076.1"
                     /translation="MNKNMRILIVDDFSTMRRIVKNLLGDLGFTNTAEAEDGHAALSL
                     LQSQPFDFVVTDWNMPVMTGIELLKAIRADAKLKTLPVLMVTAEAKREQIIEAAQSGV
                     NGYIIKPFTAQTLEEKLGKIFERLAASA"
     gene            20610..21215
                     /locus_tag="QEL58_001599"
     CDS             20610..21215
                     /locus_tag="QEL58_001599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019302999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein phosphatase CheZ"
                     /protein_id="HDS1676077.1"
                     /translation="MDTTVDKNALALRLQEALDALESGDEAAWRQRIDGLVALRTQPM
                     MSGLSRLARELGQALGELPTVPSEAGELDDACARLDHVVAMTEQATHRTLDLAEECRS
                     LTEQLRAEGLQPGQDAQLERIRHNLTEIALTQSYQDLTGQIIRRVVGIVRRVHEGFGA
                     LGLPPEQHRTDPELAGPALKGLDRHAVSQNDADDLLSDLGL"
     gene            21218..>21828
                     /locus_tag="QEL58_001600"
     CDS             21218..>21828
                     /locus_tag="QEL58_001600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hpt domain-containing protein"
                     /protein_id="HDS1676078.1"
                     /translation="MSAVSDDITADFIIEAQEILDRLGEQLVSLEQAPQDSEQLNAVF
                     RGYHTLKGGAGFLGVTAMVELCHAAEEALGAARAGQAVLQAHHFDAAQQSLDYLQSML
                     DAVSSGTEPGYAPPDLIAQFDVHGGTTAAPAAVAPAAGGDLITEDEFEALLDQLHGGN
                     APTAVAPAKKADDGLISEDEFEALLDQLHGGAAPGSKAVAAAP"
BASE COUNT         3615 a         7696 c         7287 g         3230 t
ORIGIN      
        1 gggcgcagcc ctgccagcac accctcaccc acaccctcac gacactgaat cgaaaaccgg
       61 tttcggcacg gcacttgcac aagctccagc agacaacccc atccctgttt ctggaaccgt
      121 tgcagatgtc ccactccgtc acttcgatcc tctcccagat ccgctcctac cagacccagg
      181 tgggacagtc cgcggcgctc aacccgctgg ccgaagcgcc gcgtagcaat gccctgccgg
      241 gcacggtgct ggatgcgccg caggtccagc ccgccagctt caccgaaacc ctgcgtggag
      301 cgattgccgg cgtcaacgat gcgcaacaga aatccggcgc cctggccaag gccttcgaaa
      361 tgggtgaccc cagtgccgac ctggccaagg tgatggtcgc ctcgcagcag tcccagatcg
      421 ccttccgcgc caccgtggaa gtccgcaacc gtctcgtcca ggcttaccag gacgtgatga
      481 acatgccgct gtaaggaacg ttgacgcatg gcactgacgc tctccaagga cagcctgaac
      541 gccgagaagg ccgggcaatg gttcgaccgc ctgcagagtc tgcagatcac ccgtcggctg
      601 ggcctgatgg cgatgatcgc ggtggcggtg gcggcaggcc tgtccgtgtt cttctggtcg
      661 cagaagccgg gcatggtccc gctgtatacc ggcctggacc agaaggcgac cgctgaagcg
      721 accgacctgc tgcgcgccgc gcagattccg ttcgcgctcg acccggccac cggtggcatc
      781 accgtgccgg aaaagaacct gcacgacgcc cgcctgaagc tggccggatc gggcctgacc
      841 gacagcggca agctcggctt cgagctgatg gaacgcgacc ccggcttcgg cgtcagccag
      901 ttcgtggaaa gcgcgcgcta ccagcacgcg ctggaaaccg aactgtcgcg caccatcaac
      961 acgctgcggc cggtgcgcga ttcacgcgtg cacctggcca ttcccaagcc cagcgccttt
     1021 acccgccagc gtgacgtggc cagcgcctca gtgacgctgg aactgcgcgg cggccagcag
     1081 ctggaacgca gccaggtcga cgccatcgtg cacatggtcg cggccagcat tccggacctc
     1141 gcgccggaac gggtgaccgt ggtcgaccag agcgggcgca tgctcagcgt cagcgatccg
     1201 aacagcgagg ctgcggtcaa cgccgcccag ttcgagcagg tgcgccgcca ggaaacctcg
     1261 ttcaaccagc gcatccgcga actgctggag ccgatgaccg gcccgggccg ggtcaatccg
     1321 gaagtgagcg tggacatgga tttctcggtg accgaggaag cccgtgagct ttacaacggt
     1381 gagccgcaga agctgcgcag cgagcagatg agcgagaaca gcaccaccac gccgggcccg
     1441 cagggcgtgc cgggtgcgac cagcaacagc ccgccgggcc agcaggccgc accggccacc
     1501 gcgcaggcgc cgaccgaaag cagcaagaac gcgacccgca actacgagct ggaccgcacc
     1561 ctgcagcaca cccgccagcc ggccggccgc atcaagcgcg tctcggtggc ggtgctggtg
     1621 gacaacgtgc cgcgcgccgg tgccaacggc aaggttgcgc cgcagccgct gtcggccgcc
     1681 gaactgaccc gcgtcgaagc gctggtcaag caggcggtcg gtttcaacgc cgagcgtggc
     1741 gacaccgtgt cggtgatgaa cgccccgttc gtgcgtgaca ccacgccggt cgaaggcccg
     1801 gcctggtggg agctgccgtg ggtgcacgat gccggccgca tgctgctggg tgcggtggtg
     1861 gtgctggccc tgctgttcgg cgtgctgcgc ccggcgctgc gcgcgatcac cggccagaag
     1921 aagaacgacg agcaggcact ggagccgcat accgcggacg tgcagctggt ggatgacgat
     1981 ggcatgccgc tgccggcgct gggcgccgac cgcgccagcc tgggcgggcc ggatgcactg
     2041 gccctgccgg tggattcata tgaggaacga ctgcggatgg cgcgtgaagc cgtgaagacc
     2101 gactccaagc gcgtggccca ggtggtcaag ggctgggtgg ccaatgactg aggcacaact
     2161 gaccggtgtg cagcgcgcgg cggtactgct gctgtccctg ggtgagctgg acgcggccga
     2221 ggtgctgcgc cacatggaac ccaaggaagt gcagaagatc ggcatcgcca tggccaccat
     2281 gaccgatatc acccgcgagc aggtggaacg ggtgatggac cagttcggcc aggagctggg
     2341 ctcgaagacc tcgctgggcg tgggctcgga cgactacatc cgcaacatgc tggtgcaggc
     2401 gctgggcagc gaaaaggccg gcaacctgat cgaccgcatc ctgctcggcc gcaacaccac
     2461 cggcctggat gcgctgaagt ggatggaccc gcgtgcggtg gccgacctgg tgcgcaacga
     2521 gcacccgcag atcatcgcca tcgtgatggc ccacctggaa accgaccagg ctgccgatgc
     2581 gctgaagctg ctgcccgacc gtacccgcgt ggacgtgctg ctgcgcattg ccaccctcga
     2641 cggtattccg ccgaacgcgc tgaatgaact caacgagatc atggagcgcc agttcgccgg
     2701 caaccagaac ctgaagtcgt ccaacatcgg cggcgtgcag tgcgcggcca acatcctgaa
     2761 cttcatggac agcggccagg accaggcgat cctgggcgag atcgcccgta tcgacgcgcc
     2821 gctgagcaac cgcatccagg acctgatgtt cgtgttcgac gacctggtcg acctggacga
     2881 tcgcgaaatg cagctggtgc tgcgcgaagt gagcggcgag cgcctgggcc tggccctgcg
     2941 cggtgccgac atcaaggtgc gcgacaagat cacccgcaac atgtcgcagc gcgcggcgga
     3001 aatcctgctg gaagacatgg aggcccgtgg cccggtgcgc ctgtccgacg tggaaggcgc
     3061 gcagcgcgag atcctggcca tcgtcaagcg catggccgat gaaggcactg tcaccatcgg
     3121 tggcagcgcg gaggccatgc tgtgagcaac gtcgtgcgct ggcttgcccc ggacctgctg
     3181 gcccagcccg aaccggcgcg ggcccaggag gatgtgttcg aactcaccga gccggacccg
     3241 gaacacgaac cggaaccgcc gctgcagctg ccgaccctgg aggaaatcca ggcgatccag
     3301 gacagcgccg agaaggaagg cttccagcac ggccataccg aaggctatgg ccagggccag
     3361 gccgaggtgc gtcgcctcgc cgcgcagatc gagggcatcc tcgacaactt cagccggccg
     3421 ctggtgcggc tggagaacga agtggtcggc gcgctgggcg agctggcggt gcgtatcgcc
     3481 ggtgcgctgg tcggtcgagc ctacgaggcc gagccggcgc tgctcgcgca gctggtcggt
     3541 gaagcgatcg atgccgtggg tggcagtacc cgcgaggtgg aagtccgcct gcacccggac
     3601 gacatcgccg ccctcgcccc gctgttgaac ctgtcgccgc agcagcgcct ggtaccggat
     3661 accagcctca gtcgtggcga cctgcgcgtg cacgccgaag ccgtgcgcat cgacggcacc
     3721 ctggaagcgc gcctgcgcgg tgcgctggat gcggtgatcc gccagaccgg agcaaccgca
     3781 tgagcccgga atcgcaagcc gcgccacaac cggcagcgca gccggccgac tgggccgtgg
     3841 cccgcaacct gcgcctggcc agccgtctcg acggcctgcg cgtggacacc gcgcatggtc
     3901 gcgggctgat ccgcgaaggc gtgctgcgcc gcgcggtcgg cctgaccctg gaagcggtcg
     3961 gctgcgaggc gccactgggc gccagctgca aggtcgaagt ggtcgatggc ggctgggtcg
     4021 atgccgaagt ggtcggcttt gccggcgaac gtacctacct gatgcccagt gccgaactgc
     4081 acggcctgct gcccaacgcg cgggtggtgc cctcggcgcg ccgtggcggc gtggaagtgg
     4141 gcgaaggcct gctcggccgc gtgatcgaca gcgacggcgt accgctggac ggcaagggac
     4201 cgatccgcgc cgaagggcat gtcggcatgg ccggcgtgtc gatcaatccg ctggcgcgcg
     4261 aaccgatcac ccagccgttg gacgtcggcg tgcgcgcgat caatgcgctg ctgccgattg
     4321 gccgcggcca gcgtgtcggc ctgttcgctg gctccggcgt cggcaagtcg acgctgctgg
     4381 gcatgatgac ccgctacacc gccgccgacg tgatcgtggt tggcctgatc ggcgagcgcg
     4441 gccgcgaagt gcgcgatttc gtcgagacca cgctgggcga ggaaggcctg cgccgcgcgg
     4501 tggtggtcgc cagccccgcc gatcggccgc cgctggcacg cctgcacggc gcctaccgcg
     4561 ccaccgccat cgccgagtgg ttccgcgacc agggcttgaa cgtgctgctg ctgatggact
     4621 cgctgacccg cttcgcgcag gcgcagcgcg agatcggcct gtcggtgggc gaaccaccaa
     4681 ccacccgcgg ctacccgccg tcggtgttcg ccaagctgcc ggcgctggtt gaacgcgcgg
     4741 gcaacggtgc caagggccgc ggctcgatca ccgcgttcta cacggtgctg accgaaggcg
     4801 acgatccgca ggatccgatc gccgatgcgg cgcgcgcgat cctcgacggc cacatcctgc
     4861 tgtcgcgccg cgtcgccgac agtggcctgt acccggccat cgacgtcgaa tcgtcggtca
     4921 gccgcgtggt cacggaaatc gccgacgagc cgtggcgcct gcgcatccgc aagctgaagc
     4981 ggctggtgtc ggcctactca gccaaccgcg acctgatcgc catcggtgcc tatcagcgcg
     5041 gcaacgacgc cgcgaccgac gaagccctgg aacgttggcc ggaaatcatg gagttcctcg
     5101 gccaggacgt tgccaaggcc gcagatctcc cgcacagcca ggcggcgctg cagcgcctgg
     5161 tggaacaaga gagctaagcc atgaaccagt ccaagcgcat cgatcccctg ctcaagcggg
     5221 cccaggaaca cgaggacgcg gtggcccgcg atctcgccga acgccagcgc gtgctcgata
     5281 cccatctatc gcgactggac gaactgcgcc gttatgccga ggagtacgcc aacgcccaga
     5341 tggcggcgac cagcccggcg caactgctca accgtcgcgc cttcctcgac cgcctcgaca
     5401 gcgcggtgga gcagcagcag cgcaccgtgg atggcaaccg cgagaaagtg gaagccgagc
     5461 gggcacgact gatcctggcc agccgcgaca aggccgtact ggagcagctg gccgccagct
     5521 accgcgcgca ggagaaagtg gtgaccgacc gccgcgacca gcgcgagatg gatgacatcg
     5581 gcgcgcgccg ggcgcggctg gtgcaggccg aagaccagga cggtgccgag cagggaggcc
     5641 gcgcgtgatg cccgctccac tcagcggcag cgccagcgcc cagccgcagg gctccggcaa
     5701 tggtgccgcg cgtaccccgc gcgcggacag caacaaggaa ttcagccagc tgctgcacgg
     5761 aggcgcgccg gctgccgatg cgcccgcccg ggcgtcgagc acgccgacac ccaccacccc
     5821 gcagggtcca gcgtcggaca gcagaggtca ggccggcagc gagcgcaacc cggacaccgc
     5881 cgccgcaccc gaggacaccg cgaccgtggt gcctgcagta ccggccaagc cgcttgccga
     5941 gaaggacgca tcggcagcga ccgaggaggc gccctggccg ccgctgggcc ttgccgggct
     6001 ggtgctggcg gtaccgctcc ccgccgatcc tgccgccgct gccctgcccg cccccgcagt
     6061 gacggccacc gacgcagacg gcgttgccct gcctgccaca gctgcacaat cggccgctgc
     6121 ggttgtaccg gccgctgcca cgccggctgc cgccgccacc gagggcaagg ccaacgccgc
     6181 gtccggcacc gagcaggcga ccacgctgcc attgcctgag atgctgctgc ccggaaaacg
     6241 cagcgagcgt agcgaagacg gcgacgcgcc cctgatcggc gagcgcaccg cggcgcccct
     6301 gctgcacgcc ccggccaacg ccgcggtgca ggacctgaag gccgcactcg ctgctggcaa
     6361 cgcgatcttc aacggcgagc cgacgccgaa gccggtgctc ggtgatgatg gcttcgacca
     6421 ggccatcggc gcgcggctgg gctggctggc tgaccagaag atcggccacg cccacatccg
     6481 actgagcccg gatgacatgg gcccggtcga tgtgcgcctg cagttgaatg gcgacaaggt
     6541 gcatgccagc ttcagcagcc cgcatgtgga cgtgcgccag gccctggaaa acagcctgcc
     6601 gcgcctgcgc gagctgctcg gcgagcaggg cttccagctg gcccacgccg atgtcggcca
     6661 ccaggccccc ggtggtgacg gcaatgcgtc gggaccatcc agtggcggcg ggcgggccgg
     6721 tgacggagaa ccgacgccgg gcgacgccag cgtctccccc gcccagttga tccgccagcg
     6781 cgggttgctg gatgcctacg cctgacaggc gtgccaacca aggttggcac ccaccgacac
     6841 aggtatccga cggaattccg tcgcacccct cgacccgccc ttcggcacgc cccttgcata
     6901 tcccggtgaa gcaaccctca ggagcttcac cccgtggccg cagccgctga aaaaaccaag
     6961 aagaccgccg agaaggacaa gaccgccaag ccgcgtagtc cgatcctgat caccgcactg
     7021 gtggccgtac tggccgccgc agccgccggt ggtggcgtct ggttcttcac ccagtccaag
     7081 cacgaagaga aggccgcgca ggcgccgaag aagaccacca cgcccgcccc cgcccagtac
     7141 ttcgcgctgg acccggcctt cgtggtcaac ctcaacggcc cggtcgacgg cccgcgctac
     7201 ctgcagctgg aagtgcagct gatgacccgc gacccggccg cgctggaggc gatcaagacc
     7261 cacgccccgg ccatccgggc gcgcctgctg atgctgttct cgcaggtcag ccccgaccag
     7321 atcgccgata tcgccggcaa gcagaagctg caggccgcct cgctcgccga agtgcagaag
     7381 gtgctcaagg ccgagaccgg cagcaacggc gccgatgatc tgctgttcac cagcttcgtg
     7441 acccagtaag ggcccaccga tgaatgacct gctgtcccag gacgagatcg atgccctgct
     7501 ccacggcgtg gacagtggcg cggtcgagac cgatccggaa ccgccgtcag gcgaggcgcg
     7561 ttcgtacgac ttcgccagcc aggaccgcat catccgcggt cgcatgccga ccctggaaat
     7621 ggtccacgag cgcttcgcgc gcctgtggcg gatcggcctg ttcaacctga tccgccgctc
     7681 ggccgagctg tcggtgcgcg gcatcgagct gatcaagttc aacgactaca tgcactcgct
     7741 gtatgtgccg accaacctga acctgatccg cttcaagccg ctgcgcggta ccggcctgat
     7801 cgtgttcgag ccgaccctgg tgttcgccat cgtcgacaac ttcttcggcg gcgacgggcg
     7861 ctacccgacg cgcatcgagg gccgcgagtt caccgccacc gaaatgcggg tgatccacct
     7921 gctgctgaag cagaccttcg ccgacctgcg cgaggcctgg gcaccggtga tggacgtcga
     7981 cttcgagtac atcaactcgg agatcaaccc gcacttcgcc aacatcgtga ccccgcgcga
     8041 atacgtggtg gtgtgccgcc tgcacgtgga actggacggc ggcggcggcg acatccacgt
     8101 caccctgccg tactcgatgc tggagccgat ccgcgaactg ctcgacgcgg gcatccagag
     8161 cgaccgcaac gaccgcgacg agagctgggg ccagaccctg cgcgagcagc tcaacatcgc
     8221 cgaggtgacg ctgtccagcg tgctggccag caagcgcatg accctgcgcg acctgacccg
     8281 gctgaaggtc ggtgatgtgc tgccgatcga actgagcccg caggtgccgc tgtgcgtgga
     8341 gaacatcccg gtgttcaccg gcgagttcgg catcgccaac ggcatgaacg ccgtgaagat
     8401 caccgctacc catccgccgg gcacccgtcc gcgcgtaccc gtcatccagg aagacccgca
     8461 atgaacgata tcgacgccct cgaaccgacc ccggcccagt tcagcagcct gcaggccgat
     8521 gaggcgaacg gtcccgacct gaacctggac gtgatcctcg acgtgccggt gaccctgtcg
     8581 ctggaagtcg gtcgcgcccg cctgccgatc cgcaacctgc tgcagctcaa ccagggctcg
     8641 gtggtggaac tggaacgcgg cgccggcgaa tcactggatg tattcgtcaa cggcaccctg
     8701 atcgcccacg gcgaagtggt ggtgatcaat gaccgcttcg gcgtgcgctt gaccgacgtg
     8761 gtcagcccga gcgagcggat ccggagactg cgttgagcct gctggcctcc accctgctgg
     8821 cggtcggcaa gaccgccgcg ccgattggcc cgcaggtcgg ccagcacgcg gccgccgcac
     8881 cgagcctgtt cggtgcggtg ctggcgctgc tggcggtgct ggccctggtc atcggcctgg
     8941 gctggctgct caagcgcctg cccggcagcg gcttccgccc ggccgaaggc atgaagctgg
     9001 tggccagcct gagtgtcggt gccaaggaac gcgtggtggt ggtggaagtc aacggccagc
     9061 agctgctgct gggcgtgacc gccggtggca tcaataccct gcacaccctg cccgaaccgc
     9121 tgccgccgcc ggcaccggtg cgcgtgccgg atttcaagaa cctgccgaat ttcgcccagc
     9181 tgctgcagca gcggctgcgc aaggacccct gacatgcgtg tcacccgtac ccgtgttgcc
     9241 accctgatgc cgtggctgct gttgcttgcc ctgtgcctgt tgccggcact ggcgttcgcc
     9301 gcgcccggcg cgccgaccac gccgctgccg gacatcaacg tcggcaagat cggcggtgcg
     9361 ccggtcagcc tgccgctgca gaccctgctg ctgatgacgg cgatcaccct gatcccgtcg
     9421 atgctgctgg tgctgacctc gttcacccgc atcatcatcg tgctgggcct gctgcgccag
     9481 gcactgggca ccgggcagac gccgtccaac caggtgctgc tggggctggc cctgttcctc
     9541 accgcgatgg tgatgatgcc gacctgggac aaggcctgga gtgccggcat ggcgccctac
     9601 ctcaacggcg agatcgactt ccagaccgcg tggacgctga ccaccacacc gttgcgcggc
     9661 ttcatgctgg cgcagatccg cgagaccgac ctgatgacct tcgccggcat cgccgggcat
     9721 ggcacctatg ccagccccga cgcgattccg ttcccggtgc tggttgcctc gttcgtcacc
     9781 agcgagctga agaccgcctt cgagatcggc ttcctgatct tcattccgtt cgtgatcatc
     9841 gacctggtcg tggccagcgt gctgatgtcg atgggcatga tgatgctgtc gccgatgctg
     9901 gtgtcggccc cgttcaagat cctgctgttc gtgctggtgg atggctgggt gctgaccgtg
     9961 ggcaccttgg cggcaagctt caatccggcc tgatatccct cgtaaagcgc agtcgagcat
    10021 ggctcgactc tacataagca gatggaaccc gaatgtcccc cgaacttgcc ttgaccgaac
    10081 tgcgtggcgg cctgatcacc gtgttgtggg tggccggccc gttgctgctt accgtgctgg
    10141 tggtgggcgt ggtggtcggt gtcgtgcagg ccgcgaccca gttgaacgaa ccgaccatcg
    10201 ccttcgtcgc caaggcggcg gcactgacag ccgtgctgtt cgcactgggc agcctgctga
    10261 tcggccacct ggttgaattc accacgctgc tgttccagcg cattccgcac ctgatcggct
    10321 aggacgcgca actcgatgga tgccgctacc cagatggccg ccgacggcct gcaggccttc
    10381 ggcatgatcg gcaccgtgct gtggaccatg ctgcgtatcg gtgcggtggc catggcgatg
    10441 ccgatggttg gaacccgcgc agtaccggcg cgggtccgcg tggtgctggc cggcaccctg
    10501 gccatcgcgc tggcgccact gttgccgccc gtacccgagt ggaccggctt cgatgccgcc
    10561 accgtgctga ccatcgcccg tgaactggcg atcggcgtgg ccatcggctt cctgctgcgg
    10621 ctggtgttcg aggccggcgc gatggccggc gaactgatcg cccagggcac cggcctggcc
    10681 ttcgcgcaga tgagcgaccc attgcgcggc ggcacctcgg gcgtgatcgg ccagtggttc
    10741 tacctgctgt tcggcctgct gttcttcact gccaacggcc acctggcctt gatctcgctg
    10801 gtggtggaca gctaccgggc gctgccgatc ggcgctccgc tgccggaccc acatgcattc
    10861 ttcagcattg ccccgacctt cctgctgacc gtgctgcgtg gcgcgctgac cctggcgatt
    10921 ccgctgacag tggcaatgct ggcggtgaac ctggccttcg gcgtgctggc ccgcgccgcg
    10981 ccggcgctga acccgatcca gctcggcctg ccggtctcgc tgctgctggg cctgttcctg
    11041 ctggccctgc tggccgggga aatgggcccg ccggtacagc gcctgttcga cgccgccttc
    11101 caggctgcgg acgcggtcac acgctgaccc gatcatcacg ttttgccgct tgcccttccc
    11161 ccgggtctgc gcgttagagt gaatgcgtgg cgtccagggg ggacgccacg atcggccagc
    11221 gttccgcgcc ggcccgcctc atgcatgccc caccgtggtt tccgtcgaca ggcaggtccg
    11281 ggagactgac gaatgctggt aggcacgtac aacccgtggc tggtagcgat ctcgttgctg
    11341 gttgccgtga tggcctcgta caccgcgctg gcgatggccg ggcgcacggt caccgcaccc
    11401 ggcaagggcg cggcctggtg gtggcggctc ggcggcggct tcgccatggg cctgggcatc
    11461 tggtcgatgc acttcatcgg catgctcgcc ttcaacctgc ccattccact cggctacgac
    11521 ctgccgatca ccctgctttc ccttgcactg gccatcgcct cgtcggtgtt cgcgctgtgg
    11581 ctggtctcgc tgcgcaccct gccgcacccg cggctggccg gtggtgcatt gctgatgggc
    11641 accggcatcg ccggcatgca ttacgtcggc atggccgcca tgcgcatgcg cccgggcatc
    11701 gagtacgacc ccggttggct gctgttctcg ctgatggtgg cggtcgccgc ctcttggacc
    11761 gcgctgtatg tggcattccg cctgcgcgcg cagcgcacgc gggtgggtga tcggctggcc
    11821 gccgccggcc tgctcgggct ggccatcgtc ggcatgcact acaccggcat ggccgccgca
    11881 cgcttcccgg aaggcagcat ctgcggcgcg gcggtgggcg acgggctgca gagcgaatgg
    11941 ttggcgatgc tggtggtggt gctgaccgtg gccatcctgg ccgtggtgct ggtggtgtcg
    12001 tggctggatc agcgcgtgga agcgcagctg ctgcgcctgc gcaattcact gctgagcacc
    12061 tcgctgaccg acgcccagca ggaactgacc caggccgcgc tgcacgaccc gctgacccgc
    12121 ctgcccaacc gcctgctgct gcaacggcgc atcgtgcagg cgctggccga ggccgaacag
    12181 ggcggcaacc gcttcgcggt gatgttcatg gacctggacg ggttcaagca ggtcaacgat
    12241 gcctatggcc accaggccgg cgatgccctg ctggtggcgg tggccgagcg cacgcgccag
    12301 ctgttgcggc cgcacgacat gctggcacgg ctgggcggcg atgaattcgt gctggtggtg
    12361 cgcatcgagc acgacgagga cctgccgacc ctggcccgtc gcatcctaca ggcggtgggc
    12421 agcggcccgc tgctgcccga caacgaactg caggtgaccg ccagcatcgg cgtggcgatc
    12481 tgccccgacc atgccgccag cgagcgccag ctgatggcct tcgccgatgc agcgatgtac
    12541 caggccaagg aatccgggcg caacgccttc gtgctgttcg ccgactggat gaacgacagc
    12601 gccgagcagc agttccgcct gctggccgac ctgcgccggg cgatcggcag cgatcagctg
    12661 ttcctgaact accagccgaa gatccgcgtg gccacgcaga aggtggccgg cgccgaggca
    12721 ctgatccgct ggcgccatcc cgagcatggc ctgattccgc cggatcgctt catccgcctg
    12781 gccgaacgca gcggcgcgat caacgacatc ggccgctggg cgctggacca ggcctgccag
    12841 cagctgcggc gctggcacga cgccggccac gaaggctggt cgatgtcggt gaacctgtcg
    12901 ccggtacagt tcagttcgcc gcacctgctg caggacgtgc gctcggtgat cgaacgccac
    12961 gccatcgcgc cccgccatct ggtgctggag atcaccgaaa gcacagtgat gcgcgatacc
    13021 gacaccagcc tgcgcctgct gcaggcgttg tcggcactgg gcgttggcat ttccatcgac
    13081 gacttcggca ccggctattc cagcctgctg tacctgaagc ggctgccggc caccgagatc
    13141 aagatcgacc acgccttcgt gcgcgacctg gagcacagcg ccgaggacgt ggtgatcgtc
    13201 tcggcgatcg tggcgctggg ccacgcactg gacatggaca tcgtggccga aggggtggag
    13261 accgctgccc agcgcgccta cctggaacga ttgggctgcg actacctgca gggctacctg
    13321 ctcggtcgcc cggtcgatgc cgcccgcttc atgcagctgc acgacctgcc ccggccacgg
    13381 gtggaactgg cgcagagccc gccgacccag catccacccg ggtaactccg ggctgcacgc
    13441 ctgcggggta cggcctggtg ctgcccgcac ctgccctggc aggtgcccat cctggttggc
    13501 acctgaaccc gtcacggaac agttcttgca cgcaccccgg catcccctgc cgcagtgccc
    13561 gtgatgtccg agaacgaatc cgccggcgaa aagaccgaac aacccaccga aaaacgcctg
    13621 cgcgacgccc gtgaacaggg caacctgccg cgctcgcgcg aactcggcac ggccgccgtg
    13681 ttcggcgccg gcgtgctggc ggtgatggcc atgagcggct cgatcggccg cggcgcgacc
    13741 gcctggatga agcatgcgct cagcccggaa cagagcctgc ggcagaaccc gaaggaactg
    13801 ttcggccact tcggcgacct gctgctgcag ttcctgctgg tgatcgcgcc gctggtgctg
    13861 gtctgcctgc tggccagctt cgtcgcgccg ctggtgatgg gcggcctgcg ctggtcgcag
    13921 aaggcattgc tgcccgacat caaccggctg aacccgatga gcgggctcaa gcgcctgtat
    13981 ggcccggagg ccatcgccga gttcaccaaa tcgctgctgc gcgtggcctt cgtcggcgtc
    14041 gccgctggcc tggtggtgtg gaccggcttc gataccctgc gcgggttgat ccaccacccg
    14101 ctggagaccg ccatcaccga cggcctcggc ttcaccctgc ggctgctgct ggccaccgcc
    14161 ggcgcgatgc tggtgctggc cgccatcgat gccccgtacc agcgctggaa ctggatgcgc
    14221 aagctgaaga tgacccgtga agagctgcgc cgggaaatga aggaaagcga gggcagcccg
    14281 gaggtgaagg gccgcatccg ccagctgcag cagcagatgg ccaaccgccg gatgatggaa
    14341 gcggtgccca ctgccgacgt ggtggtggtc aacccgaccc actacgcggt ggccctgaag
    14401 tacgaaggcg gcgccatgaa cgcccccacc gtggtcgccc tgggcgtgga cgagaccgcc
    14461 ctgcgcatcc gtgaagtggc cgacggcaac aaggtcgcga tcgtctctgc cccgcctttg
    14521 gcacgcgcct tgtatcggga aggccaactc ggaaaggaaa tccccgtgag actgtattcg
    14581 gccgtcgccc aggtcctgtc ctacgtctac cagctgcgct cctggcgcac tgggccgatg
    14641 ccggacgccc cgcacatcca ggtggatgaa ttcggcaagg gaggccgccc gtgagcgccc
    14701 agccttcctc cggcttcaac acccgccgcg ccctggaaat gatccgccag ggacttggcg
    14761 cgccgctgat cgtgctggcc ctgctggcca tggtcgtggt gccgctggcc gcgccggtgc
    14821 tcgatgcact gttcaccttc aacatcgcca tctcgctgat ggtgctgctg gcggttgtct
    14881 acgtgaagcg cccgctggac ttcaccatct tcccgatcgt gctgctgatc accaccatgc
    14941 tgcggctggc gctgaacgtg gcctccaccc gcgtgatcct gctcaacggc cagaacggcc
    15001 atgacgccgc gggcaaggtc attgccgcgt tcggcgagtt cgtgatcggc ggcaactacg
    15061 cggtcggcat cgtggtgttc gcgatcctga ccatcatcaa cttcgtggtc atcaccaagg
    15121 gcgccggccg cgtctcggaa gtgaccgcgc gcttcatcct ggacgcgatg cccggcaagc
    15181 agatggccat cgacgccgac ctcaacgccg gattgctgac gcgtgaagag gccaaggcgc
    15241 gccgcgagga agtccgcgag gaagcggact tctacggcgc gatggacggt gccagcaagt
    15301 tcatccgcgg cgatgccatc gccggcatcc tgatcctgtt catcaacatg ctcggcggcc
    15361 tggccgtggg cgtgatgcag cacggcatgc cgttcggcca ggcggccgcc acctacaccc
    15421 tgctgtcgat cggtgacggc ctggtggcgc agctgccggc gctgctggtg tccagtgcgg
    15481 tggcgatgct ggtcacccgc gcctcgcgtt cgcaggacat ggcccaggcc atgagcggcc
    15541 aggtgttcgg ccagtaccgc gcgctggcga tcaccgccgg catcctcggc ctggtcgggc
    15601 tggtgccggg catgcccaac gtcgctttcc tgacgctggc ggcgatcctc ggcttcatcg
    15661 cctggaagct gtaccgcaag gagaaggcac cggcagccaa cgccgcggcc gcaggcggcg
    15721 acgcggccgc gctcaatgca ctgggccgcc cggccgcacc ggcgccgacc gccgaactga
    15781 gctgggacga gctgcgcccg gtcgatccgc tgggcctgga agtgggctac cggctgattc
    15841 cgctggtgga cgccaaccag ggcggcgagc tgatggcgcg gatcaagggc gtgcgccgca
    15901 agctgaccca ggatgtcggc ttcctgatcc cctcggtaca catccgcgac aacctggaac
    15961 tgccggccaa cggctaccgc gtgctggtgc atggcgtgcc ggtggccacc gccgagatcc
    16021 atcccgaccg cgagctggcg ctggaccctg gcagcgcgct gggggcactg gagggcattg
    16081 ccggcaagga ccccgcgttc ggcctggatg ccacctggat ccagccgcac cagcgtgccc
    16141 aggccgaaac gctgggctat accgtggtcg atccggccac ggtggttgcc acccatctgt
    16201 cgcacctgat ccgcgagcac gcgccggaac tgctcggcca cgaggaggtg cagcacctgc
    16261 tggccaacct ggccaagagc gcgcccaagc tcgtcgaaga tctgacgccg aaggcgctgc
    16321 cgctgtcggc ggtggtgcgc gtgctgcaga acctgctggt ggaacgtatt ccgatccgcc
    16381 agctgcgcaa gatcgccgaa gcgctggtcg agcatgcgcc cagcagccag gacccggccg
    16441 tgctgaccgc cgcggtgcgc actgcgctgg gccgtttcat cgtgcaggag atcgccggaa
    16501 tgtcggcgga gctgccggtg ttcaccctca acccgcaatt ggaacgtgtc ttgcaggagt
    16561 ccacgcaggg caacggcgcc gcgctggaac ccggactcgc tgagcgactg caccagagcc
    16621 tggccgaatg tgtcagcaag caggaagccc gcaacgagcc cgcggtcgtg ctggtacccg
    16681 gcccggtgcg cgccgcgctg gcccgcctgg tccgccacag cgttccgtcg ctgtcggtcc
    16741 tggcctacag cgaggtgccg gaagacaagc gcctgaagct ggtcggaacg atcagctgac
    16801 gccgcccttc gatgcgccag aaaacagaca ccaccttcga accaacgcaa cagacagaca
    16861 ccaaggggaa cccgcaccgt gcagaccacc gaccacccga gttccccgac cgccactccg
    16921 ccgtcttcgt cccgtgacca cagcatgaaa atcaaacgat tcgtcgccgc cgacatgcgc
    16981 tcggccatga acctggtgcg caaggaacat ggtcctgacg ccgtgatcct gtccaaccgc
    17041 cggatcgagg aaggcatcga gatcgtcgcc gccgccaact acgacgagag cgccgtgcag
    17101 cgtgcactgg aagcctcgcg ccgcgacgtg gccccgccgc cggcgcccaa gccgcgtacc
    17161 gccgccgatg cggtgatcgc cgccgtcacc cgccgccgca gcagcacccc ggcaccggaa
    17221 ccggtggccg ccaccacctc ggccgtcgcc gccctcgccc gtgcggcggt cggcgccacc
    17281 ggccgcaccc tggacagcgc cgacgagatc gtaccgaccc gcggcagcac cggcttcgcc
    17341 gccacgctgg cacgcgccgc cgtcaatgaa ccggcgctgc cggaacagat cttcgccccg
    17401 ttcgccgaag ccatcgtcgc gccggccaac cgcgcccgct tcctgatcga cccgccgcac
    17461 gaggcgcatc acgaaagccc ggcgccggcc gtacagccac cgccgctgcc gaccgctgcc
    17521 gtggccgaca tgcagcctgg catcgccgcc agcgaaccgg cagcggtgga cgccgacgcc
    17581 gaagccagcc cggccccggt gctggccccg gcgccgacgc tgacggtggt cgccccggac
    17641 gacgccgaga tccgccagct gcgccaggaa gtggccggca tgcgccaggt gatcgagcgc
    17701 gagatgaacc gcttcaccga cgagcgcctg cgcggctgcc cggtacgcgc caccgcgctg
    17761 gacctgatgg acgaatacgg cttcgacgcc ggcctggccc gcgacgtggc catgcagatc
    17821 ccgctggaga ccgaagcgca ccgtggccgt ggcctgatgc tggggctgat ctcgcgcaag
    17881 ctgccgatcg ctccggtcga cccgctggaa gaaggcggcg tgatcgccct ggtcggcccg
    17941 accggcgccg gcaagaccac caccatcgcc aagctggcct cgcgcttcgc cgagaagcac
    18001 gcgccccgcg acgtggccct ggtgaccacc gacaccaccc gcatcggcgc ccgcgagcag
    18061 ttgtacggct acggccgcca gctcggcatc gccgtgcacg aggccaacag cggcaccgac
    18121 ctggaccagc tgctggagcg cctgaaggac tacaagctgg tgctgatcga caccgccggc
    18181 ctgggcccgc gcgaccgtgc actggccgcc cagctgcagt ggctgcgcgc cgcccgccag
    18241 gtccgcaccc tgctggtgct gccggccaac accagcttcg gtgacatgga cgaggtggtc
    18301 cgccgcttcg gcgccgccaa cctgcaaggg ctggtactga gcaagctgga cgagaccggc
    18361 cgcttcggca acgccctgtc ggtggccgtc gaccacgccc tgccgatcac ctgggtgacc
    18421 gatggccagg acgttccgga ggacctgcac cgggccagcg cagccaatct tgtacttcgc
    18481 cttgaagatt tgcgccgagc ggccgatatg ccctgcaacc cggagttgaa ccatgccgtc
    18541 gcgtgagtac gccaagctga ccaagacctt cccgctgtcg gccacccgca gcgagccgct
    18601 cggccctgtg cgcaccattg ccgtaaccgg cggcaagggc ggcgtgggca agaccaacgt
    18661 ctcggccaac ctggccgtgg cactggccgg catgggcaag cgcacgctgc tgctggacgc
    18721 cgacctcggc ctggccaaca tcgacgtgat cctggggctg aaccccacct tcacgctggc
    18781 cgacctggtc gccggccgct gctcgctgga agacgtcatc gtcgaaggcc cgaacggcgt
    18841 gctggtggtc ccggccgcgt ccggccgccg ccacatggcc gagctggccc cggccgagca
    18901 tgtcggcctg gtcaacgtgt tctccgaact ggaacgcgag ctggacatca tggtggtgga
    18961 caccgccgcc ggcatcaccg acggcgtgct gaccttctgc caggccgcgc aggacaccgt
    19021 ggtggtggtc tgcgacgagc cggcctcgat caccgacgcc tacgcactga tcaaggtgct
    19081 gtcgcgcgaa cgcggcgtgg accgcatcca ggtggtggcc aacatggtgc gcgaccccaa
    19141 cgaaggccgc gtgctgtacg agaagctgac ccgcgtctgc gagaagttcc tcgccgatgt
    19201 ctcgctgaac tacctgggct gcgtgccgca ggatgactgg ctgcgcctgt cggtgcagcg
    19261 ccagcagccg gtggtgaagg cctacccgtc cagcccggcg gcgctggcaa tcaccgagat
    19321 cgcccgccgc accgcacgct ggcaggcgcc gaccgaaccg cgcggcggcg tcgagttctt
    19381 cctcgaacgc atcctcaagc aacgtggggt ggcggcatga aaggcgcagc ccagtaccgg
    19441 gaggtccagc gctcggccgc caacgaggtg atcgcccagc actcggacct ggtgcggcgc
    19501 atcgcccacc accttgccgc acgcctgccg gccagcgtcg aagtcgacga cctgatccag
    19561 gccggcatga tgggcctgat cgaggcctcg cgcagctacg acgccgacca gggcgcttcg
    19621 ttcgagacct acgcctcgat ccgcatccgc ggctcgatga tcgatgaaat ccgtcgcggc
    19681 gactgggttc cgcgctcggt gcaccgccgc gcccgcgacg ccgccgccac catccgccgg
    19741 ctcgagcaga gcagtggccg tgccgccagc gctaccgaag tggctgccgc gatggagatg
    19801 ccgctgcccg aatacctgcg gctgatggaa gacgccgcac gcggccaggt gctgagcctg
    19861 gagtcgcgca tcgaggacca gggcgagctg gacaccgtcg cgcagggcgg cccgaccccg
    19921 cagcaggtgc tggagcgcgg cgagttcggc cgcgagctgg gcaaggccat cggccatctg
    19981 cccgagcgcg aacagctggt gctctcgctc tattacgagc aggaactgaa cctgaaggag
    20041 atcggcgcgg tgctcggcgt gagcgagtcg cgggtctgcc agatccacgg ccaggccgtg
    20101 ctgcggctgc gtggccggct gaaaatcttc gaggcggcgg acgccggcct ggaagaatga
    20161 acatccccga ggcggctgcc cccggccgcc cggaatgaac aacaaaggaa ctctgctttg
    20221 aacaagaaca tgcgcatcct gatcgtcgac gacttctcga ccatgcgtcg aatcgtcaag
    20281 aacctgctgg gcgatctggg cttcaccaat accgccgaag ccgaggacgg gcatgctgcg
    20341 ctgtcgctgc tgcagagcca gccgttcgat ttcgtggtca ccgactggaa catgccggtg
    20401 atgaccggca tcgagctgct caaggcgatc cgtgccgatg ccaagctgaa gaccctgccg
    20461 gtgctgatgg tcaccgccga agccaagcgc gagcagatca tcgaagccgc ccagagcggc
    20521 gtgaacggct acatcatcaa gccgttcacc gcgcagaccc tggaagaaaa gctgggcaag
    20581 atcttcgaac gcctggcggc cagcgcctga tggacaccac ggtcgacaag aacgccctcg
    20641 ccctgcgcct gcaggaagcc ctggacgcac tggagtccgg tgacgaggcc gcctggcggc
    20701 agcgcatcga cggactggtc gcgctgcgca cgcagccgat gatgagcggc ctttcgcggc
    20761 tggcccgcga actgggacag gcgctgggtg aactgccgac cgtacccagc gaagccggtg
    20821 agctggatga cgcctgcgcg cgcctggacc acgtggtggc aatgaccgaa caggccacgc
    20881 accgcaccct cgacctggcc gaggaatgcc gcagcctgac cgaacaacta cgcgccgaag
    20941 gcctgcagcc gggccaggac gcgcagcttg agcgcatccg ccacaacctc accgagatcg
    21001 ccctgaccca gagctaccag gacctgaccg ggcagatcat ccgtcgcgtg gtcggcatcg
    21061 ttcgccgcgt gcacgaaggc ttcggcgcgc tcggcctgcc gccggaacag catcgcaccg
    21121 acccggaact ggccgggccg gcactgaagg gactggaccg ccacgcggtc tcgcagaacg
    21181 acgccgacga cctgttgtcg gatctggggc tgtaagcatg agcgcggtat ccgacgacat
    21241 cactgccgat ttcatcatcg aggcccagga aatcctggat cggctgggcg aacagctggt
    21301 gtcgctggag caggcaccgc aggacagcga gcagctcaat gcggtgttcc gcggctacca
    21361 cacgctcaag ggcggcgccg gcttcctcgg cgtcaccgcc atggtcgagc tgtgccacgc
    21421 cgccgaagaa gcactcggcg cagcgcgtgc cggccaggcg gtgctgcagg cgcaccactt
    21481 cgatgccgcc cagcaatcgc tggactacct gcaatcgatg cttgatgccg tgtcctcggg
    21541 caccgagccc ggctatgcac cgccggacct gatcgcccag ttcgatgtgc acggtggcac
    21601 cactgccgca ccggctgccg tcgcccccgc tgccggcggc gacctgatca ccgaagacga
    21661 attcgaggcc ctgctcgacc agctgcacgg cggcaacgcg cccactgcgg tggcgccagc
    21721 gaagaaagcc gacgacggcc tgatcagcga ggacgagttc gaagccctgc tcgaccagct
    21781 gcacggcggt gcggcccccg gcagcaaagc ggtcgccgcc gcaccgat
//
LOCUS       DAOKIP010000048        21621 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.048,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000048 DAOKIP010000000
VERSION     DAOKIP010000048.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 21621)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21621)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21621
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.048"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            50..898
                     /locus_tag="QEL58_001601"
     CDS             50..898
                     /locus_tag="QEL58_001601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MurR/RpiR family transcriptional regulator"
                     /protein_id="HDS1676079.1"
                     /translation="MPPLLKIRSERGQMSAIERRIADFILDNAHLLRDYSSQQLASAL
                     GISQSSVVKFSQKLGFKGYPDLKYSIGQDVARAGADTQQAPSEPDSGDDYLRLGEALR
                     RSKALAEEETRQANPRAEIERIVQLLDDAPKLFVYGLGDDGLYAREFAMRLSLLGLLV
                     VPHTDPVLMLANLSAARPGDVLLVFSEFGSLPQLSQLSRQFQDMGGKVISITRHTANP
                     LRAHADAALAVCAHDRTPQVAQLLYRSAMHALLDFLFVLLCHANPDRQQQLAVNLERI
                     DHLLDS"
     gene            914..1675
                     /locus_tag="QEL58_001602"
     CDS             914..1675
                     /locus_tag="QEL58_001602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019336757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase family protein"
                     /protein_id="HDS1676080.1"
                     /translation="MKSLVRLATAALLLATAWAVHAAPLDGARQLIVVTSEGWDSTQG
                     QLQAYVRDGKGWHAHGQPFPVALGRTGSAWGLGLHPAQADGPQKQEGDGRSPAGVFAL
                     GSAFGYAVTRPGTAMPYQPMLDSSYCMDVPASPFYNRIVDANKVGSAAVKGSTEPMRL
                     DLHNKGDVRYQQGFVIAHNPDNQPGKGSCIFAHLWRQPGEATAGCTAMPLARMQALLD
                     WLRPQDTPRFVLLPRAEYQRLQAQWQLPALSGDVR"
     gene            1672..2973
                     /locus_tag="QEL58_001603"
     CDS             1672..2973
                     /locus_tag="QEL58_001603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005407814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HDS1676081.1"
                     /translation="MSAQDEPQLQRAVSRWQIVGLSINDVIGSGIYLLPAATVALLGP
                     FSLWGVVAAGIVVALLVLCYAQAASYFDEPGGSYLYAREAFGRFAGFEIGWMIWLTRI
                     SSAAALSNALADAVARFWPWAGAGLGRIAVIVVSLGFLTGVNIIGVRSAARTGVVLVI
                     GKMLPLLLFVAIGAFYIDPQLAFSGQRPDPHDLQRMGEAALLLLYAYAGFENIPAAAG
                     EYRNPRRDIPFALITMIITVTVIYGAVQVVAQGTLAGLSSSATPLADAAAGFGGEALA
                     LILTIGATISILGTNSNTMMMGPRFLFALARDGYGPKILAQVHPRFHTPAASILCQGL
                     IALGLALSGSFVQLALLSMTTRLFAYIGTAAAVLVLAKRYADRPGALKLPGGPLIPVL
                     ALLLCLALFASASWQNIAAALVAFAIGAVIYKLPRKDADAG"
     gene            3082..3423
                     /locus_tag="QEL58_001604"
     CDS             3082..3423
                     /locus_tag="QEL58_001604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004139052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676082.1"
                     /translation="MTEYQIPGRVPDDSTTRDAVSNFWRERYTAEPYYDDQLFFEDYE
                     PAYRIGHAARAQDIIRAYEEVEGELESRWASERGRSRLEWAQARSAVRRGWEEAVNLD
                     QRLDKGVPRGT"
     gene            3569..4738
                     /locus_tag="QEL58_001605"
     CDS             3569..4738
                     /locus_tag="QEL58_001605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012478946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent sugar dehydrogenase"
                     /protein_id="HDS1676083.1"
                     /translation="MTRTPLLLALGLVPILATSACNAADPAANGGQAAAPATTTAADQ
                     RPFTATEVSRFDQPWAMTFLPDGSLLVTEKRGKLQHLDLASGQKHEITGVPKVAYGGQ
                     GGFGDVILHPQFARNHVIYLSYAEEGTLDTRGAAVARATLALDANGAGQLKDLKVIWR
                     QSPKVSGEGHYGHRLAFGPDGKLWISSSERQKFDPAQDMSGNLGKIIRLNDDGSLPAD
                     NPFASQGGIAAQVWSLGHRNILGMAFDANGKLWAHEMGPAGGDELNLIVRGANYGYPI
                     VSNGNHYDGRPIPDHDTRPEFAAPKVTWTPVISPAGFVIYSGTLFPQWKGSGFIGGLS
                     STSLVRVAFDGDSAREAERFNMGERIREVEQGPDGALWLLEDGSKARLLKLTPKT"
     gene            complement(4809..5351)
                     /locus_tag="QEL58_001606"
     CDS             complement(4809..5351)
                     /locus_tag="QEL58_001606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005412036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676084.1"
                     /translation="MRRMAYLIPALLLAACSQPAPPAEPAADAPPPMQASASATPAAE
                     PAATAPATPVVDAPAAEEGDARARIESVLGDAAQYEKVFNAFKTAVVDGDRAAVVEEV
                     RFPLNIAGGKKITGPGEFQRNYEKIITPAVVKAMSGQDFGKVFVNQQGVMIGDGQVWL
                     TGECLDKACARTEVKVGTIQ"
     gene            complement(5482..7656)
                     /locus_tag="QEL58_001607"
     CDS             complement(5482..7656)
                     /locus_tag="QEL58_001607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019336359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 3 C-terminal
                     domain-containing protein"
                     /protein_id="HDS1676085.1"
                     /translation="MASDRIESLIAQMTVEEKVGQLGVFADMVRPFAPDVNPEANVRN
                     ADQVLQQVREGKVGSLFNGVGAELGRRIQQVATEESRLGIPVILAADVIHGMRTVFPI
                     PLGEAASFEPELAERTARATAIEATAAGLHWTYAPAVDIARDQRWGRGAEGAGEDVVL
                     GCAFAAARVRGFQGSDLRADDSLLATPKHFAAYGAVMAGMEYNMVDISPQTLRDVHLP
                     PFKAAFDAGAITVMSSFNDINGVPASANAELLTDILRGEWKFPGVVISDYTADMELVA
                     HGYAADDRDATAKAFTAGLDLSMQSGFYAEHLPGLVESGEVPMAVLDEGVRRILWLKE
                     TIGLFDDPYRSLDPAREADTSHIAAHDALSRDAARRSIVLLNNRDNVLPLQKTGQKIA
                     LIGPFVQDRENIEGCWTLFGDKQRYVDLETGVRAAIGDDSLLEIVPGCDLETAIAGGT
                     EAAVAAALRADVVVLALGEPQRYSGEAQSRVEITLPPAQQALAEAVAMTGKPLVVLLR
                     NGRALALQGAVRNAQAVAVTWYLGTQTGHAVADVLFGDYSPSGRLPVSFPQVSGQQPY
                     FYNHPRTGRPELPTMSEFKARWREIPNEPLYPFGHGIGYTSFDYGVPQLSAAQLGWDE
                     TLTLTTTLTNSGAVAGEEVVQLYIHDRVASRVRPVRELKDFRKVALQPGESTEVVFTL
                     TREQLAFTGRDGVLRAEPGQFEVWVCASSAAGEAVQFELLKG"
     gene            complement(7785..9056)
                     /locus_tag="QEL58_001608"
     CDS             complement(7785..9056)
                     /locus_tag="QEL58_001608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005407808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel"
                     /protein_id="HDS1676086.1"
                     /translation="MVDAVVAVQWLEKLQNTLEPYPGAYLALMITALLVAAGLANWVT
                     KRILVRGLRRLLSRLPGADTGRGSHLMRVISRLSNVVPSQVIASGIRIVPDLPPGLVS
                     FIIGACQAWAILTVVLAISHALDAANDLYERRPEARNKPIKGYLQVAKIVIFVIAGLS
                     IVATLAGVDLRYLVTGLGAATAVLMLIFQDTILSLVASVQISGDGRVRIGDWIEMPSQ
                     NADGDVIDIALHTVTVQNFDKTITTIPTKKLVTESFKNWRGMQEAGGRRIKRALYLDQ
                     HSVGFLDEGDLAFLGEFALLRDYLHEKAQELGQWNGRLREQGVAEVNSRRVTNLGTFR
                     AYVERYLRSHPGIHTDMTLLVRQLQPTTEGLPLELYCFTRSTAWGEYEAVQSDIFDHL
                     LAILPAFGLRVFQASSDAMLMAGQRQLAGSE"
     gene            complement(9119..9472)
                     /gene="folB"
                     /locus_tag="QEL58_001609"
     CDS             complement(9119..9472)
                     /gene="folB"
                     /locus_tag="QEL58_001609"
                     /EC_number="4.1.2.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005407807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin aldolase"
                     /protein_id="HDS1676087.1"
                     /translation="MDKVFIEGLTINALIGIYDWERRIRQDLVFDLEMGFDNRRPAAT
                     DDIAHTLNYKAVSKRLEQFVRESEFGLVETLAERCAQIVLDEFNVKWLRLKLSKPGAV
                     RGARAVGVIIERTRD"
     gene            9835..10494
                     /locus_tag="QEL58_001610"
     CDS             9835..10494
                     /locus_tag="QEL58_001610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008268506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676088.1"
                     /translation="MAAYDALRRALSAERLSTYERIASTCGPDVTAESLYVWNMRMCG
                     ALMMPVHLCEVVTRNAAASALARQHGPRWPWNDAFRRRLPASSSASARAALEQVASRA
                     TDTPGIVADLPMVFWQQLFTCRFDATLWIPALGTVLRHAPAAHPSVIRKAIHADIGRI
                     RHLRNRIAHHEPILERDLGADLAAIGRLIHARCPHTLGWLQRHERATTVLAASPLGAR
                     A"
     gene            complement(10551..11576)
                     /gene="tsaD"
                     /locus_tag="QEL58_001611"
     CDS             complement(10551..11576)
                     /gene="tsaD"
                     /locus_tag="QEL58_001611"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019662214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     transferase subunit TsaD"
                     /protein_id="HDS1676089.1"
                     /translation="MRVLGIESSCDETGVAVYDTDLAGSAALRAHAVYSQIALHAEYG
                     GVVPELASRDHVRKLLPLVRQTLAEAGLGVGDIDGVAYTAGPGLVGALLVGAGVARSL
                     AWALEVPAVGVHHMEGHLLAPLMEDDPPEAPFVALLVSGGHTQLVAVDAIGQYRLLGE
                     TLDDAAGEAFDKTAKLMGLPYPGGPQLARLAEQGTPGAYRFARPMTDRPGLDFSFSGL
                     KTQVLMAWRDSDQSEQTRADIARGFEDAVVETLSIKCERALEAAGTNVIVVAGGVGAN
                     TRLRARLKQMAERLGGRACFPRPALCTDNGAMIAFAGALRLQAGQHSPPKVDVTPRWD
                     MATLPAV"
     gene            11743..11958
                     /gene="rpsU"
                     /locus_tag="QEL58_001612"
     CDS             11743..11958
                     /gene="rpsU"
                     /locus_tag="QEL58_001612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002808376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S21"
                     /protein_id="HDS1676090.1"
                     /translation="MPSVKVRENEPFEFALRRFKRTCEKAGVLAETRKREFYEKPTQE
                     RKRKAAAAVKRQLRRSSRDVTKRQRLY"
     gene            12092..12535
                     /locus_tag="QEL58_001613"
     CDS             12092..12535
                     /locus_tag="QEL58_001613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011038898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GatB/YqeY domain-containing protein"
                     /protein_id="HDS1676091.1"
                     /translation="MSMKQQLTEDMKAAMKAGEKHKLGVIRLINAAIKQREVDERIEL
                     DDTAVIAVLDKMVKQRKDSVSQFEAANREDLAEIERAEIVVIEAYLPAKMGEAEIVAA
                     IQAAIAETGASGPADMGKLMGALKPKLAGQADMGLVSKLVKQQLA"
     gene            12639..13583
                     /locus_tag="QEL58_001614"
     CDS             12639..13583
                     /locus_tag="QEL58_001614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012509842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihY/virulence factor BrkB family protein"
                     /protein_id="HDS1676092.1"
                     /translation="MVEPSHSPADTRPHGIPARLRHYADRLQDSFPMAVAKRFVEIDV
                     LTQAASVSFYALLSMAPLLVLLLWLTASLYPPAQQALISQIGSVAGSSVASVADTVLH
                     NANSQPSVGSLAGLWSTLLLFVGATAVFAQLQNALNRIFHTSGQRLEGIKAWLRKRVF
                     SFGVVLALGFLLILSMTATTALQVVFAQLPSVLPAIGYLTSLLLYTLAFAFLYHYLPD
                     RRVAWRQAFIGGAITSVLFTLGRYGIGFYIATVAPGSAYGSMGALVIALVWIYYATAV
                     FFVGALMTAVIDERQHARAQLARAGAEGQQAGPGIASE"
     gene            13645..15384
                     /locus_tag="QEL58_001615"
     CDS             13645..15384
                     /locus_tag="QEL58_001615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HDS1676093.1"
                     /translation="MARIPDAFIDDLLARTDIVEVVGSRVPLKRQGKEYAARCPFHDE
                     RSASFTVSPTKQFYHCFGCGAHGTAISFLMNYDRLEFLDAVDELAKRAGMEVPRNENP
                     RSPQQQDDSRELYSALEAATKFFQSNLQGSDKARSYLDGRGVDEENRARFQIGYAPDG
                     YSGLRDALGKDERRMKLLDRAGLFSKNDRGHVYDKFRDRVMFPIFDRRGRVIAFGGRV
                     FEKDDGPKYLNSPETALFHKGRELYGLWQVRQANQKIERLIVVEGYMDVVSLFQFGVT
                     QAVATLGTATTPDHAELLFRNAPDVFFCFDGDAAGRRAGWKALESVLPRMKDGRQAFF
                     LFLPDGEDPDTIVRKEGAEAFNERLKQATPLSQFFFDELTREINLGTLDGKARLAERA
                     KPMLAQIPDGAFGDLMKQQLAQLTGLGGNAASARAPMPQRQPARTIQPVARRSLVRGA
                     IAVLLQQPSLALTLGGKHHFQGLRLPGVELLLELLGLVEQRPDISTGALLEHFDGREE
                     QAALHTLAAQTLPGTEASWTQELHDAVAQLEKQLLVQRLEELLAKQRQQGLDDTDKYE
                     LRELLKARAGLRL"
     gene            15412..15912
                     /locus_tag="QEL58_001616"
     CDS             15412..15912
                     /locus_tag="QEL58_001616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005407801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-protein phosphatase"
                     /protein_id="HDS1676094.1"
                     /translation="MLLRLTCLLLLSLCLPLTALAENAPLNEVRPGLYAGGQPSGTQL
                     RALAAQGVRTVIDLRQPDEDRGFDEAGMAESLGLRYVRIPVAGADGLDAANLSAVHQA
                     LQQSAGPALLHCASGNRAGAVLALVTARYEHASPEQALQLGQRAGLTSLEAATRQRLA
                     APAASP"
     gene            15941..16912
                     /locus_tag="QEL58_001617"
     CDS             15941..16912
                     /locus_tag="QEL58_001617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005407800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bile acid:sodium symporter"
                     /protein_id="HDS1676095.1"
                     /translation="MTRWWSRLRPDNFTIALLCTVGLASLLPMKGAAAIVLDDVTTVA
                     IAALFFLHGARLPRESIIGGMLHWRLHLTILACTFILFPLLGLMFKPLSGWLLTPELY
                     LGVLFLCTLPSTVQSSIAFTSMARGNVPAAVCSASLSSILGVFLTPLLLTALAGTSGG
                     IHDPLHAIGGIMLQLLVPFVAGHLLRPWIAGWVERQRALLRYTDQATILLVVYSAFGE
                     AVTEGLWSKTPVLSLLAVAVVAAVLLGIAMPLITFIARRLRFNREDEIAIVFCGSKKS
                     LATGVPIAKVLFAGGSLGAIVLPVMIYHQIQLIVCGVIAQRYAKRAP"
     gene            complement(17006..17731)
                     /locus_tag="QEL58_001618"
     CDS             complement(17006..17731)
                     /locus_tag="QEL58_001618"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676096.1"
                     /translation="MKFPLLCGAFVVIAVNAPAPAPDEEAGAVGQWLQQRVMQAAAQA
                     STSPAGSYRVVRLADLDAPEEVKQQLRADIERSNGVVQAAAGNIPSQAEMLAAVPRTQ
                     RSASELRQRLPQPPSSLEASVLGPAELIGMEPSGALEGGRSSGLSRFFQLEGVGVVEF
                     SENNFVAAGTRIEVIAEAQNTTVKGAPAHVKKSADSAGRTRVELAWTGDSKTYSLIAT
                     GERGSDVERNARVLHDIAADIVD"
     gene            complement(17985..18791)
                     /locus_tag="QEL58_001619"
     CDS             complement(17985..18791)
                     /locus_tag="QEL58_001619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005407799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="calcium-binding protein"
                     /protein_id="HDS1676097.1"
                     /translation="MHSIFRWTAALLLALGMALSAHADDTAAQIRQHAGDHRLLVLGE
                     FHGTRETPLLVRPLVDDYSRNGPILLALELPRGENPTLRDYLASDGGAAARQRLHGRA
                     FWTVRDDQHDGRRSRDMLAMIEGLRALKAQGRAIEVVGYDVNHSDGGSQARDDRMAAE
                     LRRLYRRLPEGASMVVLTGNVHAMLQRPADVPPEMQTQPMASALRDLDIYSVRLEALR
                     GHFWGCMDRCKALALLERPARAPEVNTHAGREYDLWVWMQQLSVGTLLEP"
     gene            complement(18937..19830)
                     /locus_tag="QEL58_001620"
     CDS             complement(18937..19830)
                     /locus_tag="QEL58_001620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014645697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protoheme IX farnesyltransferase"
                     /protein_id="HDS1676098.1"
                     /translation="MFSNYRQYWDLTKPKVVALIVFTALVGMVLAIPGVPSWEQVRAG
                     LLGFLGIWLAASAAAAINQLLDAHIDAQMARTSWRPLVVGKVKPWQVLVFAGVLIVLS
                     MAILVLWVNLITAVLTFASLIGYAVIYTVYLKRATSQNIVIGGLAGAMPPMLGWAAVT
                     GMQGSSDWAYSSLLVLIIFIWTPPHFWALAIFRREDYAKAEIPMLPVTHGVVHTRKQI
                     MAYSVVLALVCLLPYLVGMSGAFYLGGAIVLNAVFLWYAWRMLNPPDELFSMKMFHYS
                     IVYLMALFAFLLVDHWILPWL"
     gene            complement(19835..20998)
                     /locus_tag="QEL58_001621"
     CDS             complement(19835..20998)
                     /locus_tag="QEL58_001621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019238044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="COX15/CtaA family protein"
                     /protein_id="HDS1676099.1"
                     /translation="MSLSARPALHRNFHRLAWFAMIMTASTIMFGAFVRLSDAGLSCP
                     DWPTCYGQATWPQHVEETIGHPAAEIRPLETHKAWREQVHRFLAGALGIEILTLALLA
                     TRKRRFGSTAVVTACVLVAAGIPLYMMGWHGTASILALIGEAILLIAALRWSNIDLAR
                     AALLTLAVVIFQALLGMWTVTLLLKPIVVMGHLLGGMLMFGLLVWMAWRATHMPITLA
                     EAPKLKWLLRIGVAVLVTQIALGGWVSANYAALACGGGSASLDNFPRCANQWWPQHNF
                     VEGFTLWRGIGVDYEGGVLDGASRIAIQMAHRMFAVVVAVYLLWLGVRLFRLPSMRGW
                     ASALIALLVLQVTLGILNVKLALPLEVAVAHNGVAVALLFVLVSLLARLRAPD"
     gene            complement(21009..21578)
                     /locus_tag="QEL58_001622"
     CDS             complement(21009..21578)
                     /locus_tag="QEL58_001622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014645695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676100.1"
                     /translation="MNTATSPQARGSGRRTLVLLFAVFFGAVALAAVLRFSGWQPTGH
                     RNAGQLLKPPVDLRQQAPTLASGQPYPWNPEARTWRLLVAPAGACDAQCVTLSQGLGK
                     VWQLFGHNADNVEILWLGTPPASIASLPALRPLAPSPALRAALPGVDDPAGLPVYVID
                     PNGFVIMRHAPGSDLGGLRKDMATLLKLK"
BASE COUNT         3550 a         7576 c         7036 g         3459 t
ORIGIN      
        1 gctccacgct gccaaccgca acgcgcctac acatgcccgg acaccccgca tgccgcccct
       61 gctgaagatc cgttccgagc gcgggcagat gtcggccatc gaacgccgca tcgccgactt
      121 catcctcgac aacgcccacc tgctgcgcga ttactcgtcc cagcagctgg ccagcgcact
      181 gggcatcagc cagtccagcg tggtgaagtt cagccagaag ctcggcttca agggctaccc
      241 ggacctgaag tattccatcg gccaggacgt cgcgcgcgcc ggggctgaca cgcagcaggc
      301 accgagcgag ccggacagcg gcgacgacta cctgcgcctg ggcgaggccc tgcgtcgcag
      361 caaggcgctg gccgaagagg aaacccgcca ggccaacccg cgcgcggaga tcgaacgcat
      421 cgtgcagctg ctcgacgacg ccccgaagct gttcgtgtac gggctgggcg atgacggcct
      481 gtacgcccgc gagttcgcca tgcggctgtc gctgctcggg ctgctggtgg tgccgcatac
      541 cgacccggtc ctgatgctgg ccaacctgtc ggcggcgcga cccggcgatg tgctgctggt
      601 gttctccgaa ttcggcagcc tgccccagct gtcgcagctg tcgcggcagt tccaggacat
      661 ggggggcaag gtgatttcca tcacccgcca caccgccaat ccgctgcgcg cgcacgcgga
      721 tgcggcactg gcggtctgcg cgcacgaccg cacgccgcag gtggcgcagc tgctgtaccg
      781 tagcgccatg cacgccttgc tggatttcct gttcgtgctg ctctgccacg ccaatccgga
      841 ccgccagcag cagctggccg tgaacctgga gcggatcgac cacctgctgg attcctgacc
      901 ggagcgcacg ttgatgaaat cgctggtccg cctcgccacc gctgcgctgc tgcttgccac
      961 agcgtgggcc gtccacgccg cgccgctgga cggcgcacgc cagttgatcg tggtcaccag
     1021 cgaaggctgg gacagcaccc agggccaact gcaggcgtat gtacgcgacg gcaagggttg
     1081 gcacgcgcat gggcagccat tcccggtggc actgggccgc accggcagcg cctgggggct
     1141 gggcctgcat ccggcacagg ccgatggccc gcagaagcag gaaggcgacg gccgcagccc
     1201 ggccggcgtg ttcgcgctcg gcagcgcgtt cggctacgcc gtcacccgcc ccggcaccgc
     1261 aatgccctac cagccgatgc tcgacagcag ctactgcatg gacgtgcccg cctcgccgtt
     1321 ctacaaccgc atcgtcgatg cgaacaaggt cggcagtgca gcggtcaagg gctccaccga
     1381 gccgatgcgg ctggacctgc acaacaaggg cgacgtgcgc taccagcagg gctttgtgat
     1441 cgcccacaac ccggacaacc agcccggcaa gggcagctgc atcttcgccc acctgtggcg
     1501 ccagccgggc gaagccacgg ccggctgcac cgccatgccg ctggcgcgca tgcaggcgct
     1561 gctggactgg ctgcggccgc aggacacgcc gcgcttcgtg ctgctgccgc gcgccgagta
     1621 ccagcgcctg caggcacagt ggcagctgcc cgcactgagc ggagacgtcc gttgagcgcg
     1681 caggacgaac cgcagctgca gcgcgcggtc agccgctggc agatcgtcgg cctgtcgatc
     1741 aacgatgtga tcggcagcgg catctacctg ctgccggccg ccaccgtcgc cctgctcggc
     1801 cccttcagcc tgtggggcgt ggtcgccgcc ggcatcgtcg tcgcgctgct ggtgctgtgc
     1861 tacgcgcagg ccgccagcta cttcgatgag ccgggcggca gctacctgta tgcgcgcgag
     1921 gcgttcggcc gcttcgccgg gttcgagatc ggctggatga tctggctgac ccgcatcagc
     1981 tcggccgcgg cgctcagcaa tgcgctggcc gatgcggtcg cacgcttctg gccgtgggct
     2041 ggcgccggcc tgggtcgcat cgcggtgatc gtggtctcgc tgggcttcct caccggggtc
     2101 aacatcatcg gcgtgcgctc ggccgcgcgc accggtgtgg tgctggtgat cggcaagatg
     2161 ctgccgctgc tgctgttcgt ggccatcggc gcgttctaca tcgatccgca gctggcgttc
     2221 tccggccagc gcccggaccc gcacgacctg cagcgcatgg gcgaggccgc attgctgctg
     2281 ctctacgcct acgccggctt cgagaacatc ccggccgccg ccggcgagta ccgcaatccg
     2341 cgccgcgata ttccgttcgc actgatcacc atgatcatca ccgtcaccgt catctacggc
     2401 gcggtgcagg tggtggcgca gggcacgctg gccggcctgt ccagctcggc cacaccactg
     2461 gccgatgccg ccgccggatt cggtggcgaa gcgctggcac tgatcctgac catcggtgcc
     2521 accatttcca tcctcggcac caacagcaac acgatgatga tgggcccgcg cttcctgttc
     2581 gcgctggccc gcgatggcta cgggccgaag atcctggcgc aggtgcatcc gcgcttccat
     2641 accccggccg cctcgatcct gtgccagggc ctgatcgcgc tcggcctggc gttgtccggt
     2701 tcgttcgtgc agctggcgct gctgtcgatg accacgcgcc tgttcgccta catcggcacc
     2761 gccgctgcgg tactggtact ggccaagcgc tatgccgacc gcccgggcgc gttgaaactg
     2821 cccggtggcc cgctgattcc ggtactggcg ctgctgctgt gcctggcgct gttcgccagt
     2881 gccagctggc agaacatcgc cgccgcgctg gtggccttcg ccatcggcgc ggtgatctac
     2941 aagctgccac gcaaggacgc cgacgccgga tgaacggtgg cgcgccctga ccggcggatt
     3001 gatctggcga tcacgctgcc ggccccggcg gttaacccgc ccgcaggcac gatcaggctt
     3061 cgtccacaac ggagcccttc catgaccgag taccagattc ccggccgcgt accggacgac
     3121 agcacgacgc gcgacgcggt cagcaacttc tggcgcgagc gctacaccgc cgagccgtac
     3181 tacgacgacc agctgttctt cgaggattat gaaccggcct accgcatcgg ccatgcggcg
     3241 cgtgcccagg acatcatccg cgcctatgag gaagtagaag gcgagctgga atcacgctgg
     3301 gccagcgagc gcggccgcag ccgcctggaa tgggcacagg cacgcagcgc ggtgcgccgt
     3361 ggttgggagg aggcggtcaa cctcgaccag cggctggaca agggcgtacc gcgcggtacc
     3421 tgatcgaacc gcgcccacga cagagccgcg tcctgcccgg ctctgtccag acatgcacct
     3481 gttcaggacc ttcgggccac gacggtcacc gctccagtgg tatacaaggg acagcccggc
     3541 catccgcatc cccgcactgg agatacccat gacccgcacg cccctgctgc tcgccctcgg
     3601 cctggtgccg atccttgcca cctcggcctg caacgctgcc gacccggccg ccaacggtgg
     3661 ccaggccgct gcaccagcga ccaccaccgc cgccgaccaa cgtcccttca ccgccaccga
     3721 agtcagccgc ttcgaccaac cgtgggcgat gaccttcctg cccgacggca gcctgctggt
     3781 tactgagaag cgcggaaagc tgcagcatct ggacctggcc agcggccaga agcatgaaat
     3841 caccggcgtt cccaaggtcg cctatggcgg ccagggcggt ttcggcgacg tgatcctgca
     3901 tccgcagttc gcccgcaacc acgtgatcta cctcagctac gccgaggaag gcacgctgga
     3961 tacccgtggt gccgccgtcg cccgcgccac gctggcgctg gacgccaatg gcgccggcca
     4021 gctgaaggac ctgaaggtga tctggcggca gagccccaag gtcagcggcg aaggccacta
     4081 cggccaccgc ctcgccttcg gcccggacgg caagctgtgg atcagctcca gcgagcggca
     4141 gaaattcgat ccggcgcagg acatgagcgg caacctgggc aagatcatcc gcctcaatga
     4201 cgatggcagc ctgcccgccg acaatccgtt cgcctcgcag gggggcatcg ccgcacaggt
     4261 gtggtcgctg ggccaccgca acatcctcgg catggccttc gatgccaacg gcaagctgtg
     4321 ggcacacgag atgggcccgg ccggcggcga cgaactgaac ctgatcgtgc gcggcgccaa
     4381 ctacggctac ccgatcgtct ccaatggcaa ccactacgat ggccgcccga ttcccgacca
     4441 cgacacccgc ccggaattcg ccgcgccgaa ggtgacctgg acgccggtga tctccccagc
     4501 cggcttcgtg atctacagcg gcaccctgtt cccgcagtgg aagggcagcg gcttcatcgg
     4561 cggcctgtcc tccacctcgc tggtgcgcgt ggccttcgac ggcgacagcg cgcgcgaagc
     4621 cgagcgcttc aacatgggcg agcgcatccg cgaagtggaa cagggcccgg atggcgcgct
     4681 gtggctgctg gaagacggca gcaaggcacg cctgctgaag ctcaccccga agacctgacg
     4741 cccgatagtg ccggccgctg gccggcatcg ctcctaccca acggccccgt acacggggcc
     4801 gtttgcattc actggatggt gccgaccttc acctcggtac gcgcacaggc cttgtccagg
     4861 cactcgccgg tcagccagac ctgcccatca ccgatcatca caccctgctg gttgacgaac
     4921 accttgccga agtcctgccc ggacatcgcc ttgaccaccg ccggcgtgat gatcttctcg
     4981 tagttgcgct ggaactcgcc cggcccggtg atcttcttgc caccagcgat gttcaacggg
     5041 aagcgcactt cctccaccac ggccgcgcgg tcaccatcaa ccacggcggt cttgaacgcg
     5101 ttgaacacct tctcgtactg cgcggcatcg cccagcacgc tttcgatgcg cgcgcgtgca
     5161 tcgccctcct cggcggcggg ggcatccacg acaggcgtgg ccggcgctgt ggcagcgggc
     5221 tctgccgcag gcgtcgccga ggcgctggcc tgcatcggcg gcggcgcatc cgccgcaggc
     5281 tcggccggcg gcgcgggctg cgaacaggcc gccagcagca gggcgggaat caggtaggcc
     5341 atccggcgca tgcacgcact ccatccaatc agggagcccg atggtagcgc cgccgcagtg
     5401 acggcaacaa aaaggggacg gagggaatta agtcgtctat ggcacaaacg acttaattcc
     5461 ctccgtcccc tttttcttcg atcagccctt cagcagttcg aactgcaccg cttcgccagc
     5521 ggccgacgag gcgcacaccc acacctcgaa ctgtccaggc tcggcacgca gcacgccgtc
     5581 gcggccggtg aaggccagct gctcgcgggt cagggtgaac accacttccg tcgactcgcc
     5641 cggctgcaat gcaaccttgc ggaagtcctt cagttcacgc accggacgca cgcggctggc
     5701 cacgcggtcg tggatgtaca gctgcaccac ttcctcgccc gccacagcac cgctgttggt
     5761 cagcgtggtg gtgagggtca gggtctcgtc ccagcccagc tgggccgcac tcagctgagg
     5821 cacaccgtag tcgaacgagg tgtagccgat gccgtggccg aacgggtaca gcggctcgtt
     5881 cggaatctcg cgccagcgtg ccttgaactc cgacatggtc ggcagctccg ggcggccggt
     5941 gcgcgggtgg ttgtagaagt acggctgctg gccggacacc tgcgggaagc tgaccggcag
     6001 gcggccggac gggctgtaat cgccgaacag cacatcggcc acggcatggc cggtctgcgt
     6061 gcccaggtac caggtcaccg cgaccgcctg tgcattgcgc accgcgccct gcagcgccag
     6121 cgcgcggccg ttgcgcagca gcaccaccag cggcttgccg gtcatcgcca cggcctcggc
     6181 cagcgcctgc tgtgccggcg gcagggtgat ctccacgcgc gactgcgctt caccgctgta
     6241 acgctgcggt tctcccagtg ccagcaccac tacgtcggcg cgcagcgcgg cggccacggc
     6301 cgcttcggtg ccgccggcaa tcgcggtttc cagatcgcag ccgggcacga tctccagcag
     6361 cgagtcatcg ccgatggcgg cacgcacgcc ggtttccagg tccacgtagc gctgcttgtc
     6421 gccgaacagc gtccagcagc cttcgatgtt ctcgcggtcc tgcacgaacg ggccgatcag
     6481 cgcgatcttc tgcccggtct tctgcagcgg cagcacgttg tcgcggttgt tcagcagcac
     6541 gatcgaacgg cgcgcggcat cgcgcgacag tgcgtcatgc gcggcgatgt gcgaggtatc
     6601 cgcttcgcgc gccgggtcca gcgaacggta cgggtcgtcg aacaggccga tggtttcctt
     6661 cagccacagg atgcggcgca cgccttcatc cagcactgcc atcggcactt caccgctctc
     6721 gaccaggccc ggcaggtgct cggcgtagaa accgctctgc atgctcaggt cgaggccggc
     6781 ggtgaacgcc ttggcggtgg catcgcggtc atcggcggca tagccgtgcg cgaccagctc
     6841 catgtcggcg gtgtaatcgg agatcaccac gcccgggaac ttccactcac cgcgcaggat
     6901 gtcggtcagc agttcggcgt tggcgctggc cggtacaccg ttgatgtcgt tgaacgagga
     6961 catcacggtg atcgcgccag catcgaaggc ggccttgaac ggcggcaggt gcacgtcgcg
     7021 cagggtctgc ggcgagatgt ccaccatgtt gtattccatg ccggccatca ccgcgccata
     7081 ggcggcgaaa tgcttcggcg tggccagcag cgaatcgtcg gcgcgcaggt cgctgccctg
     7141 gaagccacgc acgcgggcgg cggcgaaggc acagcccagc accacgtcct caccggcccc
     7201 ttcggcgcca cggccccagc gctggtcgcg ggcgatgtcc acggccggcg cataggtcca
     7261 gtgcaggccg gcggcggtcg cctcgatggc ggtggcgcgg gcggtgcgct cggccagctc
     7321 cggttcgaag ctggcagcct cgcccagcgg gatcgggaac acggtgcgca tgccgtggat
     7381 gacgtcggca gccaggatga ccggaatgcc caggcggctc tcctcggtgg cgacctgctg
     7441 gatgcggcgg cccagctcgg cgccgacacc attgaacagc gagccgacct tgccctcgcg
     7501 cacctgctgc agcacctggt cggcattgcg cacgttggct tccgggttca cgtccggggc
     7561 gaacgggcgg accatgtccg cgaagacacc cagctggccg accttttcct cgacggtcat
     7621 ctgggcaatg agggattcga tgcgatcgga ggccaccagc agtccttgat gaaaacgttt
     7681 acaagcccgg cattctagcg atcccgcgcc atttggcgag aggtttcgtc gttcagtttc
     7741 aggctccagc cggatccgta cggtccggcc ggaggcctcg cagcttactc cgagccggcc
     7801 aactggcgct gcccggccat caacatggca tcgctggagg cctggaacac ccgcagcccg
     7861 aaggccggca ggatcgccag caggtggtcg aagatgtccg actgcaccgc ttcgtactcg
     7921 ccccaggcgg tgctgcgggt gaagcagtac agctccagcg gcaggccctc ggtggtcggt
     7981 tgcagctgcc gtaccagcag ggtcatgtcg gtatggatgc ccgggtggct gcgcaggtag
     8041 cgctccacat aggcgcggaa cgtgcccagg ttggtcaccc ggcggctgtt gacctcggcc
     8101 acgccctgtt cgcgcaggcg cccgttccac tgccccagct cctgcgcctt ctcgtgcagg
     8161 tagtcgcgca gcagtgcgaa ctcgccgagg aaggccaggt caccctcgtc caggaagccg
     8221 acgctgtgct ggtccaggta cagcgcgcgc ttgatgcggc ggccaccggc ctcctgcatg
     8281 ccgcgccagt tcttgaacga ctcggtcacc agcttcttgg tcgggatggt ggtgatggtc
     8341 ttgtcgaagt tctgcacggt cacggtgtgc agcgcgatgt cgatgacgtc accgtcggcg
     8401 ttctggctgg gcatctcgat ccagtcgccg atgcgcacgc ggccatcgcc gctgatctgc
     8461 acgctggcca ccagcgacag gatggtgtcc tggaagatca gcatcagcac cgcggtggcc
     8521 gcgcccaggc cggtcaccag atagcgcagg tcaacgccgg ccagagtggc gacgatggac
     8581 agcccggcga tcacgaagat cacgatcttg gcgacctgca ggtagccctt gatcggcttg
     8641 ttgcgtgcct cggggcggcg ctcgtaaagg tcgttggccg catccagcgc atgcgatatc
     8701 gccagcacca cggtcaggat cgcccacgcc tggcaggcgc cgatgatgaa gctgaccaga
     8761 cccggcggca ggtccggtac gatgcggatg cccgaggcga tcacctggct gggcaccacg
     8821 ttggacaggc gcgagatcac ccgcatcaga tggctgccac ggccggtgtc ggcacccggc
     8881 aggcggctga gcagacgccg cagcccgcgc accagaatgc gcttggtcac ccagttggcc
     8941 aggcccgctg cgaccagcag cgccgtgatc atcaacgcca ggtaggcgcc gggatagggt
     9001 tccagtgtgt tctgcagctt ttccagccac tgtaccgcca ccaccgcgtc caccatcggt
     9061 tgtctccttg cttcgttctt tgctgttgag gttgccggcc gcagccggcg tcgccgggtc
     9121 agtcccgcgt gcgttcgatg atcacgccca ccgcgcgtgc gccacgcacc gcacccggct
     9181 tgctcagctt caggcgcagc cacttcacgt tgaattcgtc cagcacgatc tgcgcacagc
     9241 gctcggccag ggtctcgacc aggccgaact ccgactcgcg cacgaactgc tccaggcgct
     9301 tgctgaccgc cttgtagttc agggtgtggg caatgtcgtc ggtggccgcg gggcgacggt
     9361 tgtcgaagcc catttccagg tcgaacacca ggtcctggcg gatccgtcgt tcccaatcgt
     9421 agataccgat cagggcgttg atcgtcagcc cctcgatgaa aaccttgtcc attgcggtta
     9481 ccagccgaat acaggcaacc atggtaacgg cacggcggtg agcctgcccg gaacgggcgg
     9541 tgggcactcc gaccgaggcg ggcgcgaaaa aaacaaaggg ccccgctagc ggagcccttt
     9601 ggtactacct ttgtccccgg ggggagcttt ctcaagccgc gagtcccggt ggcgcaggtg
     9661 cccagactag tcagtcatca aacggtgggt caaggccaat gccgacaacg cagaccctcg
     9721 tgttcgcccc ggccgaaacg cgggaaacag gccacgcacg caaggaggtt tcctgatggt
     9781 ggccgactcg atccctggac aacctgcgtc ttcccttcac caccgcacat cacaatggct
     9841 gcatacgatg cattgaggcg cgcgttgtca gcggagcggt tgtcgaccta cgagagaatc
     9901 gcatcaacct gcggccctga cgttactgcc gaatccctgt acgtgtggaa catgcggatg
     9961 tgcggcgcgt tgatgatgcc ggtccacctg tgcgaagtgg tcacgcgcaa cgcagcggca
    10021 tcggcattgg cccgacagca cggcccgcgc tggccttgga acgatgcctt cagacgcagg
    10081 ctacctgcct cttcatccgc ctcagccaga gccgcgctgg aacaggtcgc cagccgcgca
    10141 acagatacac ccgggatcgt cgctgacctg ccgatggtgt tctggcagca gctcttcacc
    10201 tgtcgcttcg acgccacgct gtggataccg gcgctcggga cggttctgcg tcatgcgcct
    10261 gcagctcatc caagcgtgat caggaaagcc atccatgcag acatcgggcg catccgccat
    10321 ctgcgcaacc gcatcgcgca ccacgagccc atcctggaac gcgacctcgg cgcggacctg
    10381 gcggcgatcg ggcggctgat ccatgcgcgc tgcccgcata cgctggggtg gctgcagcgc
    10441 catgagcggg cgacgaccgt gctggcagcg tcgccgttgg gtgcgcgtgc gtagcctcga
    10501 tcacgcgcag tcgagcatgg ctcgacgata cagagcgcgg cggtcggggt tcacaccgcc
    10561 ggcaacgtcg ccatgtccca gcgtggagtc acgtccacct tcggcgggct gtgctggccg
    10621 gcctgcaggc gcagcgcgcc ggcgaaggcg atcatcgcgc cgttgtcggt gcacagtgcc
    10681 gggcgcggga agcaggcgcg gccgccgagg cgctccgcca tctgcttcag gcgtgcgcgc
    10741 aggcgcgtgt tggcaccgac gccgccggcc accacgatca cgttggtccc ggccgcctcc
    10801 agcgcgcgct cgcacttgat cgacagggtc tcgaccacgg catcttcgaa gccacgggcg
    10861 atgtcggcgc gggtctgctc gctctggtcg ctgtcgcgcc aggccatcag gacctgggtc
    10921 ttcaggccgg agaagctgaa atccagcccc gggcggtcgg tcatcggccg tgcgaagcgg
    10981 tacgcgcccg gcgtgccctg ctcggccagc ctggccagct gcgggccgcc cgggtacggc
    11041 aggcccatca gcttggcggt cttgtcgaag gcctcgccgg ccgcgtcgtc cagggtctcg
    11101 cccagcaggc ggtactggcc gatggcgtcc accgccacca gctgggtatg gccaccggac
    11161 accagcagcg ccacgaacgg cgcttccggc gggtcgtcct ccatcagcgg ggccagcagg
    11221 tggccttcca tatggtgtac gcccaccgcc ggcacctcca gcgcccaggc cagcgagcgg
    11281 gccacgcccg cgcccaccag cagggcgccg accaggccgg ggccagcggt gtaggccacg
    11341 ccatcgatgt cgcccacgcc aaggccggcc tcggccaggg tctggcgcac cagcggcagc
    11401 agcttgcgga cgtggtcgcg gctggccagc tcgggcacca caccgccata ttcggcgtgc
    11461 agggcgatct ggctgtagac cgcatgggcg cgcagggccg cgctgccggc caggtcggtg
    11521 tcatacaccg ccacgccggt ctcatcacag gaagattcga tgccaaggac tcgcatgcct
    11581 gctattatga cgcccctgcc gccccctcgg gggacgtgca gatctcactg ctttcgaacc
    11641 cccggcccgt attcagggtt ggccgcttgc agtttgtcta ttcgccgcta taatgtgcgg
    11701 ctcgccgggc gtgacccggt tctactgtgt cccggagatt ccatgcccag cgtcaaagtc
    11761 cgcgagaacg agcccttcga gtttgctctt cgccgcttca agcgcacttg cgaaaaggcc
    11821 ggtgtgctgg ccgaaacccg caagcgcgag ttctacgaaa agccgaccca ggagcgcaag
    11881 cgcaaggccg ccgctgctgt gaagcgtcag ctgcgccgct cgtcgcgcga cgtcaccaag
    11941 cgtcagcgcc tgtactgatc ggacgcatct tcattgcggc gggcctgcct gtcgcgatgg
    12001 agccgaagcc ggcacgcgcg agcgtcgccg gctttttgcg tttccgggtc cgggcatccg
    12061 ccccgcccta cctaccacca cgaggttcct catgagcatg aagcagcagc tcaccgaaga
    12121 catgaaggcc gccatgaagg cgggcgagaa gcacaagctg ggcgtgatcc gcctgatcaa
    12181 cgccgccatc aagcagcgcg aagtggacga gcgcatcgag ctggatgaca ccgccgtgat
    12241 cgccgtgctc gacaagatgg tcaagcagcg caaggactcg gtcagccagt tcgaagccgc
    12301 caaccgcgaa gacctggccg agatcgagcg tgccgagatc gtggtcatcg aagcctacct
    12361 gccggccaag atgggtgaag ccgaaatcgt ggccgccatc caggccgcca tcgccgaaac
    12421 cggtgcctcc ggcccggccg acatgggcaa gctgatgggc gcgctgaagc ccaagctcgc
    12481 cggccaggcc gacatgggcc tggtgtccaa gctggtcaag cagcagctgg cataagccat
    12541 tgccggggtc ggatcccttt cgcgctgcgg aagggctctg accccatcga tgcactcgct
    12601 tcaccgcacc ttcgaccccc ggctgctaca acatccccat ggtcgagcca tcgcactccc
    12661 ccgccgacac gcgcccccac ggcatccccg cacggcttcg ccactacgct gatcgcctgc
    12721 aggacagctt cccgatggcg gtggccaagc gcttcgtcga aatcgacgtg ctgacccagg
    12781 cggcctcggt ctccttctac gccctgctgt cgatggcgcc gctgctggtg ctgctgctgt
    12841 ggctgaccgc ctcgctgtac ccgcccgcgc aacaggcact gatcagccag atcggctcag
    12901 tcgccggcag cagcgtggcc agcgtcgccg acaccgtgct gcacaacgcc aacagccagc
    12961 ccagcgttgg ttcgctggcc gggctgtgga gcacgttgct gctgttcgtc ggcgccaccg
    13021 ccgtgttcgc ccagctgcag aacgcgctga accggatctt ccacaccagc ggccagcgcc
    13081 tggagggcat caaggcctgg ctgcgcaagc gcgtgttctc gttcggcgtg gtactggcgc
    13141 tgggcttcct gctgatcctg tcgatgaccg ccaccaccgc cctgcaggtg gtattcgcgc
    13201 agctgccctc ggtactgcct gcgatcggct acctgacctc gctgctgctg tacacgctgg
    13261 ccttcgcctt cctctaccac tacctgccgg accgccgcgt ggcctggcgc caggccttca
    13321 tcggcggtgc catcacctcg gtgcttttca ccctgggccg ctatggcatc ggcttctaca
    13381 tcgctaccgt ggccccgggc agtgcctacg ggtcgatggg cgcactggtg atcgcgctgg
    13441 tctggatcta ctacgccacc gccgtgttct tcgtcggtgc gctgatgacc gcggtgatcg
    13501 acgaacgcca gcatgcacgg gcgcagctgg cccgtgccgg cgctgaaggc caacaggccg
    13561 gtcccggcat cgccagcgag taaactaggg gaacctgccg ccccctgcag cgcgccctgg
    13621 cggccgcgcc ccgttctgtt gcccatggcc cgtatccccg acgctttcat cgacgacctg
    13681 ctggcccgca ccgacatcgt cgaggtggtg ggcagccgcg tgccgctgaa gcgccagggc
    13741 aaggagtacg cggcgcgctg cccgttccat gacgagcgct cggcctcgtt cacggtctcg
    13801 cccaccaagc agttctatca ctgcttcggc tgcggcgcgc acggcaccgc gatcagcttc
    13861 ctgatgaatt acgaccgcct cgagttcctc gatgcggtgg atgaactggc caagcgcgcc
    13921 ggcatggaag tgccgcgcaa cgagaacccg cgcagccccc agcagcagga tgacagccgc
    13981 gagctgtact cggcgctgga ggcggccacc aagttcttcc agagcaacct gcagggcagc
    14041 gacaaggccc gcagctatct cgatggccgt ggcgtggatg aagagaaccg cgcgcgtttc
    14101 cagatcggct acgcgccgga tggctacagc ggcctgcgcg atgcgctggg caaggacgag
    14161 cgccgcatga agctgctcga tcgcgccggc ctgttctcca agaacgaccg cggccacgtc
    14221 tacgacaagt tccgcgaccg ggtgatgttc ccgatcttcg accgccgtgg ccgggtcatc
    14281 gccttcggcg gccgcgtgtt cgagaaggac gacggcccca agtacctcaa ctcccccgag
    14341 accgcgctgt tccacaaggg ccgcgaactg tacggcctgt ggcaggtacg ccaggccaac
    14401 cagaagatcg agcggctgat cgtggtcgag ggctacatgg acgtggtctc gctgttccag
    14461 ttcggggtca cccaggcggt ggcaacgctg ggtaccgcga ccacgccgga ccatgccgaa
    14521 ctgctgttcc gcaacgcgcc ggacgtgttc ttctgcttcg atggcgatgc cgccggccgc
    14581 cgcgccggct ggaaggcgct ggagtcggtg ctgccgcgca tgaaggatgg ccgccaggcc
    14641 ttcttcctgt tcctgcccga tggcgaggat ccggacacca tcgtgcgcaa ggaaggcgcc
    14701 gaggcgttca acgagcgcct gaagcaggcc accccactgt cacagttctt ctttgacgaa
    14761 ctcacccgcg agatcaacct gggcacgctg gacggcaagg cacgcctggc cgagcgggca
    14821 aagccgatgc tggcgcagat tcccgatggc gccttcggcg acctgatgaa gcagcagctg
    14881 gcgcagctga ccggcctcgg cggcaatgcc gcgtccgcgc gcgcaccgat gccgcagcgc
    14941 cagccggcgc gcacgatcca gccggtggcc aggcgcagcc tggtgcgcgg cgcgatcgcc
    15001 gtgctgctgc agcaaccctc gctggcgctc acgctgggcg gcaagcatca cttccagggc
    15061 ctgcgcctgc ccggcgtgga gctgctgctg gaactgctgg ggttggtcga gcagcgcccg
    15121 gacatcagta ccggcgccct gctggaacac ttcgacggcc gtgaagagca ggccgcgctg
    15181 catacgctgg cggcgcagac gctgcctggc actgaagcca gctggaccca ggaactgcac
    15241 gacgccgtgg cccagctgga gaaacagctg ctggtgcaac gtctggagga gttgttggca
    15301 aagcagcgcc agcagggtct ggacgatact gacaagtacg aactgcgcga gctgctgaag
    15361 gcccgcgccg gactgcgcct gtagcggcag attgctttcc cggagaggac catgctgctg
    15421 cgcctgacct gcctgctgtt gttgtcgctc tgcctgccgc tgacggccct ggccgaaaac
    15481 gcccctctca atgaagtccg ccctggcctg tatgccggcg gccagcccag cggcacgcag
    15541 ctgcgggcgt tggccgcgca gggcgtgcgc acggtgatcg acctgcgcca gcccgatgag
    15601 gaccgcggct tcgatgaagc cggcatggcc gaatcgctgg gcctgcgcta cgtacgcatt
    15661 cccgtggccg gggccgatgg cctggatgcg gccaacctga gcgccgtgca ccaggccctg
    15721 cagcaaagcg caggtccggc gctgctgcac tgcgcgtccg gcaaccgcgc cggtgccgtg
    15781 ctcgccctgg tcactgcacg ctacgaacac gccagcccgg aacaggccct gcagctcggg
    15841 caacgtgccg gcctgacgtc gctggaagcc gccacccgcc aacgcctggc cgcgcccgcc
    15901 gcttcgccct gactcctccg tcccaaggac tctgcccacc atgacccgct ggtggtcgcg
    15961 cctgcgacct gacaacttca ctatcgccct gctgtgcacc gtcggcctgg cctcactgct
    16021 gccgatgaag ggcgccgccg ccatcgtgct cgacgatgtc accaccgtcg ccatcgccgc
    16081 gctgttcttc ctgcatggcg cgcgcctgcc gcgcgagtcg atcatcggcg gcatgctgca
    16141 ctggcggctg cacctgacca tcctggcctg caccttcatc ctgttcccgc tgctggggct
    16201 gatgttcaag ccgctgtccg gctggctgct gaccccggag ctgtacctgg gcgtgctgtt
    16261 cctgtgcacc ctgccctcca ccgtgcagtc gtccatcgcg ttcacttcga tggcgcgcgg
    16321 caacgtaccc gcagcggtgt gcagtgcttc gctgtcgagc atcctcggtg tgttcctgac
    16381 cccgctgttg ctgaccgcac tggccggcac ctccggcggc atccacgatc cgctgcatgc
    16441 catcggcggc atcatgctgc agttgctggt gccgttcgtg gccggccacc tgctgcggcc
    16501 gtggatcgcc ggctgggtcg agaggcagcg cgcgctgctg cgctacaccg atcaggccac
    16561 catcctgctg gtggtgtact cggccttcgg cgaagccgtc accgagggcc tgtggagcaa
    16621 gacgccggtg ctgtcgctgc tggccgtggc ggtcgtggcc gccgtgctgc tcggcatcgc
    16681 catgccgctt atcaccttca tcgcccgtcg cctgcgcttc aaccgcgagg acgagatcgc
    16741 catcgtgttc tgcggctcga agaagagcct ggccaccggc gtgccgatcg ccaaggtgct
    16801 gttcgccggc ggcagcctgg gcgccatcgt gctgccggtg atgatctacc accagatcca
    16861 gctgatcgtc tgcggcgtga tcgcgcagcg gtatgccaag cgcgcgccct gaccgggcgc
    16921 gcgggttgat actggaacac gcatccacgc atgacgcgga tctatagtag atccacgcca
    16981 tgcgtggatg actctcgcgg cgccgctaat ccacaatatc cgcagcgatg tcgtgcagca
    17041 ctcgcgcgtt gcgctccacg tcgctccccc gttcgccggt ggcgatcaag ctgtaggtct
    17101 tgctgtctcc tgtccaggca agctcgacgc gggtacggcc ggcactgtcc gcgctcttct
    17161 tcacgtgcgc gggcgcgcct ttcaccgttg tgttctgcgc ctcggcgatg acctcgatac
    17221 gcgtgcccgc ggcgacgaag ttgttctcgc tgaattccac gacaccgacg ccttccaact
    17281 ggaagaagcg gctcagtccc gaggacctgc ctccctccag cgcgccactg ggctccatcc
    17341 ctatcagctc ggccggaccc aggacgctgg cttccaggct gctggggggc tgcggcaggc
    17401 gctggcgcag ttccgacgcc gaacgctgag tgcgcggcac ggccgccagc atttcagcct
    17461 gtgaggggat gttccctgct gcagcctgca cgacaccgtt ggatcgttcg atgtcagcgc
    17521 gaagctgctg cttcacttct tcgggcgcat ccaggtctgc caaccgcacg acacggtagc
    17581 tgcccgcagg cgacgtgctc gcctgtgcag ccgcctgcat gacgcgttgc tgcagccatt
    17641 gcccgactgc gcccgcctct tcatccggtg caggtgcagg tgcattcacg gcgatcacca
    17701 cgaaggcacc gcacagcaga ggaaacttca tcacgaccgc cttgctccag agaattgcga
    17761 gtcatcccgc aacacctgta tatctggcct ggatcaaccg gcttgttgaa tgagtttgca
    17821 tctgtgaccc atcgcgcgca ggaagctgaa agcgcggcaa aaccctaacg cgtggcggcc
    17881 tggtcaacgg gcgaaatggc ggccctcggg ggcagaagcc gacactgaat gcaccgggtt
    17941 ccgcgggcta ccatccacgc atggcgtgga tctactggta tccatcacgg ttccagcagc
    18001 gtgccaacgc tcagctgctg catccacacc cacaggtcgt actcgcggcc ggcatgggtg
    18061 ttgacctccg gcgcacgcgc tggccgttcg agcagggcca gtgccttgca gcgatccatg
    18121 catccccaga agtgaccgcg caacgcttcc agccgcacgc tgtagatatc caggtcgcgc
    18181 agtgccgatg ccatcggctg ggtctgcatc tccggcggga catcggccgg gcgctgcagc
    18241 atggcgtgca cgttgccggt cagcacgacc atgcttgcgc cttcaggcaa gcgccggtac
    18301 aggcgccgca gttcggcggc catgcggtca tcgcgggcct ggctgccgcc gtcactgtga
    18361 ttgacgtcgt agccgaccac ctcgatcgcg cgcccctgcg ctttcagcgc gcgcaggcct
    18421 tcgatcatcg ccagcatgtc gcggctgcga cgaccatcgt gctggtcgtc gcgcacggtc
    18481 cagaacgcgc ggccgtgcag gcgctggcgt gctgcggccc cgccatcgga agccaggtaa
    18541 tcacgcagcg tggggttttc gccgcgcggc agttccagtg ccagcaggat cgggccgtta
    18601 cgactgtagt cgtccaccaa cgggcgcacc aggagcggtg tctcgcgggt gccgtggaac
    18661 tcgcccagta ccagcaggcg gtggtcaccg gcgtgctggc ggatctgcgc ggcggtatcg
    18721 tcggcatgcg cactgagggc catgcccagc gccagcagca gcgcagcggt ccagcggaag
    18781 atcgaatgca tccctgctcg ttcctttcct tggggtcagg aacagcaatg gcggcgcagc
    18841 aaccgcggtt caatgtgatc cacgccatgc gtgggtgctg ccgccctcag atcgggcctg
    18901 agtcgagcat ggctcggctc tacaaagggc agccccttac agccagggca ggatccagtg
    18961 gtcgaccagc aggaaggcga acagcgccat caggtacacg atggagtaat ggaacatctt
    19021 catcgagaac agttcgtccg gcggattgag catgcgccag gcgtaccaga ggaacacggc
    19081 gttgagcacg atcgcgccgc ccaggtagaa cgcaccgctc atgcccacca ggtacggcag
    19141 caggcagacc agcgccagca ccaccgagta ggccatgatc tgcttgcggg tgtgcaccac
    19201 gccgtgggtc accggcagca tcgggatctc ggccttggcg tagtcctcgc ggcggaagat
    19261 cgccagcgcc cagaagtgcg gcggggtcca gatgaagatg atcagcacca gcagcgacga
    19321 atacgcccag tccgacgagc cctgcatgcc ggtaaccgcc gcccagccca gcatcggcgg
    19381 catcgcgccg gccaggccac cgatcacgat gttctgcgag gtcgcacgct tgaggtacac
    19441 ggtgtagatc accgcgtagc cgatcagcga ggcaaaggtc agcaccgcgg tgatcaggtt
    19501 cacccacagc accaggatgg ccatcgacag cacgatcagc acgccggcaa acaccagcac
    19561 ctgccacggc ttgaccttgc ccaccaccag cgggcgccac gaagtgcgcg ccatctgcgc
    19621 atcgatgtgc gcgtccagca gctggttgat cgctgcggcc gccgaggccg ccagccagat
    19681 gccgaggaag ccgagcaggc cggcgcgcac ctgctcccag ctgggcacgc cggggatggc
    19741 caggaccatg ccgaccaacg cggtgaagac gatcagggcg acgaccttgg gcttggtcag
    19801 gtcccagtac tggcggtaat tggaaaacat ggaatcagtc cggggcacgc aggcgggcca
    19861 gcaggctgac cagcacgaac aacagggcaa cggccacgcc gttgtgggcc accgccactt
    19921 ccagcggcag cgccagcttt acattgagga tgccgagggt gacctgcagc accagcagcg
    19981 cgatcagcgc gctggcccag ccacgcatgc tcggcaaccg gaacaggcgc acgcccagcc
    20041 acagcaggta gacggccacc accaccgcga acatgcggtg cgccatctgg atggcgatgc
    20101 gcgacgcgcc gtccagcacg ccgccttcgt agtccacgcc gatgccacgc cacagggtga
    20161 agccttcgac gaagttgtgc tgcggccacc attggttggc gcaacgcggg aagttgtcca
    20221 gcgaggcgct gccgccgccg catgcaagtg cggcatagtt ggcgctgacc cagccaccca
    20281 gtgcgatctg ggtgaccagc acggccacgc cgatgcgcag cagccacttc agcttcggcg
    20341 cttcggccag ggtgatcggc atgtgcgtcg cgcgccaggc catccacacc agcaggccga
    20401 acatcagcat gccgcccagc aggtggccca tcaccacgat gggcttgagc agcagggtta
    20461 ccgtccacat gcccagcagg gcctggaaga tcaccaccgc cagggtcagc agtgcagcgc
    20521 gcgccaggtc gatgttgctc cagcgcagcg cggcgatcag caggatcgcc tcgccgatca
    20581 gcgccaggat gctggcagtg ccatgccagc ccatcatgta cagcggtatg ccggcggcca
    20641 ccagtacgca ggcggtcacc accgccgtgc ttccgaagcg gcgcttgcgc gtggccagca
    20701 gggccagggt caggatctcg atgcccagcg caccggccag gaagcgatgc acctgttcac
    20761 gccaggcctt gtgggtctcc agcgggcgga tctccgccgc cgggtggccg atggtctctt
    20821 ccacgtgctg cggccaggtg gcctgtccgt agcaggtcgg ccagtccggg cagctcaggc
    20881 cggcatcgga caggcgaacg aaggcgccga acatgatcgt gctcgcggtc atgatcatgg
    20941 cgaaccacgc caggcggtgg aaattgcggt gcagcgccgg acgcgcggaa aggctcatca
    21001 aacgggactc acttcagttt cagcaacgtg gccatgtcct tgcgcagccc accaaggtcg
    21061 gaacccgggg catggcgcat gatcacgaag ccgttcggat cgatcacgta gaccggcagt
    21121 cccgccggat catcgacgcc cggcaacgcc gcgcgcaggg ctggcgacgg agccagcggc
    21181 cgcagcgcgg gcagcgaggc gatcgacgcc ggtggcgtac ccagccacag gatctcgaca
    21241 ttatcggcgt tatggccgaa cagctgccac accttgccca gtccctgcga caaagtgacg
    21301 cactgtgcat cgcaggcgcc ggccggggcc accagcaggc gccaggtacg agcctcggga
    21361 ttccatgggt aaggctggcc gctggccagg gtcggcgcct gctggcgcag gtccaccggc
    21421 ggcttcagca gctggccggc gttgcggtgc ccggttggct gccagcccga gaagcgcagc
    21481 acggcggcca gcgccaccgc cccgaagaac acggcaaaca gcagcaccag ggtccggcgg
    21541 ccggagccgc gcgcctgcgg ggacgtagcg gtgttcatgc ggggcatttt ctcacggttg
    21601 ggaaagggat gcgggtgcgg t
//
LOCUS       DAOKIP010000049        21377 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.049,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000049 DAOKIP010000000
VERSION     DAOKIP010000049.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 21377)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21377)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21377
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.049"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            4..669
                     /locus_tag="QEL58_001623"
     CDS             4..669
                     /locus_tag="QEL58_001623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017356797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676101.1"
                     /translation="MAAALTLAPFAASAQDNESPYSWNVTAVSDYLFRGVSQTDEKPT
                     LQAGFTYTSPVGLYAGVWGSGVDFGPGDPNTEIDYQIGYGVDVTPRVNFDVLLNRYTY
                     LGASSQNYNELVTTTTLDETYKLIVAYTNDQWNSGTDGWYYGVGGQWGLPQDFTLNAN
                     VGRSSFEKGLAKDYTDWNVGVSRKFGLFDVGLGYYGTDGNGRDNSGKLAHSRVLLTVA
                     IGK"
     gene            complement(869..1891)
                     /gene="tdh"
                     /locus_tag="QEL58_001624"
     CDS             complement(869..1891)
                     /gene="tdh"
                     /locus_tag="QEL58_001624"
                     /EC_number="1.1.1.103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010378413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-threonine 3-dehydrogenase"
                     /protein_id="HDS1676102.1"
                     /translation="MKALVKREAAKGIWLEEVPVPTPGPNEVLIKLEKTAICGTDLHI
                     YLWDEWSQRTIKPGLTIGHEFVGRIAALGSAVTGYEIGQRVSAEGHIVCGHCRNCRGG
                     RPHLCPNTVGIGVNVNGAFAEYMVMPASNLWPIPDQIPSELAAFFDPYGNAAHCALEF
                     NVIGEDVLITGAGPIGIIAAGICKHIGARNVVVTDVNDFRLKLAADMGATRVVNVANQ
                     SLKDVMKELHMEGFDVGLEMSGNPRAFNDMLDCMYHGGKIAMLGIMPKGAGCDWDKII
                     FKGLTVQGIYGRKMYETWYKMTQLVLSGFPLGKVMTHQLPIDDFQKGFDLMEQGKAGK
                     VVLSWN"
     gene            2184..4349
                     /locus_tag="QEL58_001625"
     CDS             2184..4349
                     /locus_tag="QEL58_001625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019337051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S46 family peptidase"
                     /protein_id="HDS1676103.1"
                     /translation="MRSNLLAFSIVASLGLVQVAHAAEGMWVPQQLPEIAGPLQKAGL
                     KLSPEQLSNLTGDPMGAVVALGGCTASFVSPQGLVVTNHHCAYGAIQLNSTAEKNLIK
                     DGFNAPKHSDELSAGPNARVYVLDQITDVTAQAKAAIAAAGNDPLARSRALDAFDKAQ
                     VAACEAEEGFRCRLYTFSGGNTYRLFRNMEIKDVRLVYAPPGSVGKYGGDVDNWMWPR
                     HTGDFSFYRAYVGKDGKPAAFSADNVPYQPKHFLKFTDQPLGAGDFVMVAGYPGRTNR
                     YALAGEFNETASWTYPTIARHYNAVLKMIDEAGKADADVKVKYAATAASMNNVAKNYA
                     GQLEGFKRIDAAGQKQAEEAAVLAWLKKQGAAGKPALAAHAQLIKHLDASKATRERDL
                     FVGQFNNTSAVSAAIGLYRLSIERTKPDAEREVGYQQRDLPTLEGGLKQMDRRYVAKM
                     DQQLQTYWLDQYVALPAAQRNNDVLNTWLGGSDANAVKALVGKLSGTELGSLDARLKW
                     FKADRAAFEASTDPAIQYAVAIMPSLLKQEEQKKIREGESLTARPLYLQALADYKKSQ
                     GEFVYPDANLSLRITFGNVMGYEPKDGVAYTPFTTLEGIVAKDTGVDPFDAPKALLDA
                     VKAKRYGGLEDKRVGSVPVNFLSNLDITGGNSGSPVLDANGKLVGLAFDGNWESVSSN
                     WVFDPVMTRMIAVDSRYMQWIMQEVAPAPELLKELNLAK"
     gene            4529..5173
                     /locus_tag="QEL58_001626"
     CDS             4529..5173
                     /locus_tag="QEL58_001626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017910762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HDS1676104.1"
                     /translation="MRILLARHGETPWNAEGRYQGQIDIPLSPIGEAQAQALGARLAS
                     VDITRAVASPLSRAQRTAQLALGAARADMLLTEPELQEIAHGEWEGLLASEIHEKDPS
                     RLQAWREEPDTVLMPGGESLRLVLERSWRGLARATEGLGEHDTLLVVAHDAVNRVILC
                     KVLGLPISRLWTFRQAPTTLNLLEGADLDSLEVVRLNDCAHHTPFFGEAKHRAL"
     gene            5215..6486
                     /gene="folC"
                     /locus_tag="QEL58_001627"
     CDS             5215..6486
                     /gene="folC"
                     /locus_tag="QEL58_001627"
                     /EC_number="6.3.2.12"
                     /EC_number="6.3.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012479252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional tetrahydrofolate
                     synthase/dihydrofolate synthase"
                     /protein_id="HDS1676105.1"
                     /translation="MTNTPTTLADWLDYIERQHPATIDMGLERVRAVATAMGLDVPAK
                     RTIVVGGTNGKGSTVAFIEAIARAAGWKVGAYTSPHLLRYNERVRIDGQDVDDAALVA
                     AFNAIEAARGDITLTYFEYGTLAALRLFADAGLDLAVLEVGLGGRLDAVNIVDADVAV
                     ITTVDIDHAEWLGEDREAIGTEKAGIIRGWKPVILGETDPPSSVLARAYLVGANAIRG
                     GSDYFYEPIDAQRWRWRDVGMRMELPTPALAGPIQLANAGAAIAALRALDKPVPRAAW
                     AAGIAAARIAGRMQAFERDGVQIRVDVGHNPQAAGQLARALKAEVVPGRTLAVYAALQ
                     DKDAVGVVQALQDVVGEWILAGLDGPRGQDATQLQARLAGTVAASAALAGSVEQALAQ
                     VLAQAGRGDRVLVFGSFHTAAAALHWLSGEA"
     gene            6568..7623
                     /locus_tag="QEL58_001628"
     CDS             6568..7623
                     /locus_tag="QEL58_001628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005408244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPOR domain-containing protein"
                     /protein_id="HDS1676106.1"
                     /translation="MDTPLKQRLIGAIVLVALAVIFLPMLVKGPAPDSGVANVPIAAP
                     NAPADGQFETRELPLVAPAGGATGLQTGQARPVQEAATPASPPTVDTSPAVAAGNYAV
                     TFGAYGSKADADAVIAYLKRSQLPGFAETATINGRQAWRVRVGPYADRAQAEAARLQA
                     VKIRADVKAEVIALDAPAANSAAVAATTAPAASSASTPAAATAPSASSNPVRSESLPP
                     STPTATTTPATRPEPPKPAPKPEAAKPEAKPEPKPDATASKPATAPATPAAPAASGVG
                     FAVQLGAFGQANDANALRDKVRAAGFSAFVEQVRTEKGTLHRVRVGPVANRADAEQLK
                     AQVAAKVGVAGMVRPHP"
     gene            7667..8428
                     /locus_tag="QEL58_001629"
     CDS             7667..8428
                     /locus_tag="QEL58_001629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019185826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CvpA family protein"
                     /protein_id="HDS1676107.1"
                     /translation="MIDIVLGVLIGASVLFGFIRGFVGTVVALVSWLLAGWMAFTFGN
                     QASHWWAAPQAPGTGHYLAGYLGVFVVTVVVVGLIGLLLKAAIKLTLLGGVDRLLGGT
                     LGLVRGLFLSSVLLLLAGFTALPGEPAWQQSQLRPVLQPAVAWMQAQLPQLDELLPQA
                     LPLDGLLPVQLPLPLAENAPSTPQVLGKPTATGDNGVLNAVVAGGGWPQPVDVEREPR
                     PAPTLPSNIEPAPARPARPAPAAGAPPGQVRPPSL"
     gene            8459..9925
                     /gene="purF"
                     /locus_tag="QEL58_001630"
     CDS             8459..9925
                     /gene="purF"
                     /locus_tag="QEL58_001630"
                     /EC_number="2.4.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002806604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidophosphoribosyltransferase"
                     /protein_id="HDS1676108.1"
                     /translation="MCGIVGIVGNQNVAGQLYDGLTVLQHRGQDAAGIATASGSRLRV
                     QKATGLVRDVFDARTMSTLEGSVGIAHVRYPTAGSEGMDEAQPFYVNSPYGIALAHNG
                     NLINTEALRQQVFEQDRRNVNTDSDSEVLLNVFAFELDAQRQLSPEAAIRAVAGVHRR
                     CKGGYAVVSVVLGLGLVAFRDPHGIRPLVLGKRSHAEGDEYIVASESAALDVLGFQRV
                     RDVQPGEALVITARGELFSEICAEPAEHTPCIFEYVYFARPDSMIDNVSVHKARMRMG
                     IKLGEKILRLRPDHDIDTIIPIPDTSRDAALEISNVLGVKYREGFIKNRYIGRTFIMP
                     GQGERVKSVRRKLNPIHLEFRNRVVLLVDDSIVRGTTSQQIVQMARDAGARKVYLASA
                     APPVRFPNIYGIDMPAAEELVAHNRTVEEIEAHLGCDWLIYQDLEDMEAAVSEGNPAL
                     RNFDSSCFNGHYPTGIEPGYFERIQQLRSDDAKHKRRA"
     gene            9938..10759
                     /locus_tag="QEL58_001631"
     CDS             9938..10759
                     /locus_tag="QEL58_001631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004154530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HDS1676109.1"
                     /translation="MDVPEVGGDLLRAAQRCLAEADPLRKVALTQACAAAFRAGRLKV
                     AADAPPPEPIRMPGRPAQLRLVHPREVPRRGLGGVEGRAAFIHAIAHIELNAIDLAWD
                     AVYRFRGLPPAFHADWVSCADDESRHFMLLRERLQVHGHDYADFPAHNGLWEMCEKTA
                     HDGLARMALVPRVLEARGLDVTPGMIEKLRNVGDGDTADVLEVILREEVAHVAAGSRW
                     YRWYCDRAGVEPRARFKELLLEYAGGYLHGPFNIEARLLAGFDADELANLVEQAG"
     gene            complement(10827..12284)
                     /locus_tag="QEL58_001632"
     CDS             complement(10827..12284)
                     /locus_tag="QEL58_001632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005412363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2235 domain-containing protein"
                     /protein_id="HDS1676110.1"
                     /translation="MARSQDTDEDVGLLRIGLFFDGTRNNAHNLARGRPQQPHPRPVQ
                     LRADDDSTYQSRLTSSYDNGETNIARLQQLYPDSRRDAVATPSLSIYVEGVGTRDDAD
                     DDLIGLAFGIGASGVRAKVQRALQVLLPAALAGLAARWRQPLRRVQLDLFGFSRGAAA
                     ARDIANQLQGWDGSRWRQLLQGAGLACAADFAPAVPVVRFIGLFDTVVAVSGGRADEQ
                     PHLALRSDIAAHVVQLTARDEHRQHYPLTSVAPPFTEIALPGVHANIGGGYNQLEEGP
                     KLLSRPRRQQLRRPAVAEYQIPPLAMLQATTAYAETQADAERWRQQLGVGDKEIWVDV
                     WHQWQQQRRAGSRSVLLSPVLYVTAAVVLRRRIDWRYQLIALQVMQQHAIDAGVQWRA
                     QAARVQGWELPSALQPIARRLVAGQALTQTQEALLRRRYLMQSAHWNFDALGDTALTY
                     AADAGVSELPYRPGPGLFYINRPTVDGKRVVLPNA"
     gene            12510..13763
                     /locus_tag="QEL58_001633"
     CDS             12510..13763
                     /locus_tag="QEL58_001633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010483932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-dependent metalloprotease"
                     /protein_id="HDS1676111.1"
                     /translation="MLSRSIGKAAGGLVLGLSVAAAAHAAPLFEPVTVISRASANSEP
                     ALGKLLATPSTATVQEVRVDAAATAQPQLEFELLGQRVQAVRSKLEALPDGGSIWYGQ
                     FRSPSDKLTAATSNGQDDPGNSLILVRSGNTITGSIRKDGKLYRLRPLGNRHVLVEVD
                     ESRMPADHPADYNQLPKIPMGENDRIGIAQASSGTPATIRVLVVATNAAVSAYGGNMQ
                     SLVQLAVAESNQGYVNSNVGITMQLAGYETTSYTESGSFDTDLARFRGTSDGYMDSIH
                     TSRNTTAADVGVLLINNTAYCGLASGIGSTASTAFAAVYWDCATGYYSFAHEIGHLQS
                     ARHDIATDSSTSPYAYGHGYRYEPSTGTGWRTIMAYNCTRSCPRLNYWSNPNISYNGI
                     PMGNASTADNQRVLVNTKATIAAFR"
     gene            complement(13851..14597)
                     /gene="lpxH"
                     /locus_tag="QEL58_001634"
     CDS             complement(13851..14597)
                     /gene="lpxH"
                     /locus_tag="QEL58_001634"
                     /EC_number="3.6.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-2,3-diacylglucosamine diphosphatase"
                     /protein_id="HDS1676112.1"
                     /translation="MTTLFISDLHLDPSRPEITDLFLRFLREQAPGADALYILGDLFE
                     AWIGDDTPSPAADAVANALKVLSDSGVPVYFIRGNRDFLLGEDYARRAGLRILPDPCL
                     IELYGRPVLLQHGDLLCTDDIPYQQFRAQTRDPAFQAQFLSQPLAARIAFAQKARDAS
                     QARQSEMKQEDRAQFESVTDVAPAEVEATFVRHGVDTMIHGHTHRPAIHSLQAGGRGC
                     TRIVLGDWYEQGSVLRVDASGWSLDTLARK"
     gene            complement(14654..15193)
                     /locus_tag="QEL58_001635"
     CDS             complement(14654..15193)
                     /locus_tag="QEL58_001635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HDS1676113.1"
                     /translation="MRTTRLELLADREARLCRRANHYCRRRRVRRLFSVISRLGDGVF
                     WYVLMGALVLLDGFDGLRASVHMAATGLAALLLYKGLKRWTRRPRPYAADLRIRAWVA
                     PLDEFSFPSGHTLHAVSFTIVALAYYPWLAPLLVPFTAGVALSRVVLGLHYPSDVLAA
                     TGIAVLLASASLAWLPLPV"
     gene            complement(15174..16319)
                     /locus_tag="QEL58_001636"
     CDS             complement(15174..16319)
                     /locus_tag="QEL58_001636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005922250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 1 protein"
                     /protein_id="HDS1676114.1"
                     /translation="MRYAIVTETYPPEVNGVALTVQGLEQGLRDSGHEVDLVRPRQAS
                     EALDSAPGTLLVPGAALPRYPGLRFGLPAPIRLGRHWQQQRPDAVYVATEGPLGWSAL
                     RTARRLGIPVASGFHTRFDEYLPDYGVAWLQAAAMRWMRRFHNQADATLVPTRELQQF
                     LGEQGFERVRLLARAVDSQQFDPGRRDPALREEWGVDGNGLVAIYVGRIAAEKNLGLA
                     VKAFRKLQQIRPKARFVWVGDGPAREKLAHENPDFIFCGIQRGEALARHFASGDLFLF
                     PSRSETFGNVTLESMASGVATVAFDYGAAREYLRNGENGAAVDNDEQFVEAAVRLAAD
                     DAQRHMLGSNAARAMKRLHPQQVVAEFDALLAELAHSRRSGHAHHAA"
     gene            complement(16477..19443)
                     /locus_tag="QEL58_001637"
     CDS             complement(16477..19443)
                     /locus_tag="QEL58_001637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005408253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDS1676115.1"
                     /translation="MTSRTVLGKAIAHALVTTTALAAVPAFAQDAGGASPTNLDRIEI
                     TGSRIRQVDVETSQPVLALSRVEIERQGFSSVADILQNVTAMGSPAISRANALSAGEN
                     TGGTYIDMRNLGAQRTLVLVNGKRLGISTSGYQDVSSLPVSAVERIEVLKDGASAIYG
                     SDAMAGVINIITRSNVNGVTANVYHGQYSEGDGARDRFDVVGGWSNDRVSLTLALEHS
                     EEKSVWAKDRWFSKYGVSDRHPNDPSNWTTLSQWGQFTGLKGGPGCTNTSQGCGYSLN
                     RGADPTNPANYHLTDATPFTGDVSNANEQMHVMYPLKRDSVYFDGRFKITDQVNLRTE
                     FGYNKRSAERQIAGYPLQSSSVSISGDPTATGLMSKDSYFNPFGNQHGYARPTDIAWN
                     RRTWEIPRVSTSELKTYRAVVSLDGTFEIGQRYFDWDVGYQYNRNELTATATGNLHKK
                     RVRDAVGPSFLDPATGKVMCGRPGAVIDGCKPWNPLVPYGRNDPNGLTGNEELMAWLF
                     PAERTTGRTTTKNAFANLSGSIMTLPAGDLGFAFGVESRKEDGRYTPDALAQTGATTN
                     LAAGPTGGSYNVKEAYLELNVPVLADLPGARELSFNAATRFSKYNTFGNTLNSKFGFK
                     WKPIDQLLVRGTWAEGFRAPTINDLYGGGSETFAQFSDPCDTQFGSSKGSAEVRARCA
                     RDIADAANFRQLKQGNVPVTTAQDATPTPFVSGSNPLLVPETSTSKTLGLVWSPTFIS
                     NFNVALDWWKIRIDNTIVGDSPNQILKDCYEQGIEARCSRFTRDPSNGIVTGLKFGNR
                     NAGFAETEGYDLDVSYRVDTSYGKLSAGWTSTYVSKNVYRSTNDVRDAITPINGVANT
                     IGTATSLAFRVRSNLVLGWDVGDFGVSWTARYYSGVKERCANASLYPDECSDPTFLAP
                     WLKAPTAYNERGAVTFHDVQFRYNLPWDATVSVGANNVFGKEAPVMYSKPNSSFSYYG
                     GYDIGRFMYMKYQQRF"
     gene            complement(19710..21236)
                     /gene="ppx"
                     /locus_tag="QEL58_001638"
     CDS             complement(19710..21236)
                     /gene="ppx"
                     /locus_tag="QEL58_001638"
                     /EC_number="3.6.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010483920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exopolyphosphatase"
                     /protein_id="HDS1676116.1"
                     /translation="MPHTTTTPPALQDGDLLAAIDLGSNSFHMVIARYTLGQLRVIDR
                     LRETVRMADGLDGKGGLSAAARQRALECLARFGQRIRNVPPHRVRALATNTVRQLRSP
                     QSFLVPAETALGHAIEVVSGREEARLIYLGVAHAQPPKPGQRRLVIDIGGGSTEFIIG
                     MGMQTLERESLQAGCIASTRRFFPGGKLSKKRWKDALAEIGREFQPFASKYRALGWQE
                     ALGSSGTHKAISEICATMKLSKGAITAEALPQLRDELLKAKKIDDIQLPGLSSDRRPI
                     IAGGILVLEAAFQALGLQKLLVSKAAMREGILYDIVGRAGENDLRDESVAALSQRYGI
                     DMTQADRVQETALSLLEQVQEHWKLDADDARMLGWAARLHELGLMIAHSGYHVHGSYV
                     LEHSDIAGFSRQEQQMLAALVRSHRRSITKTAFDALPERLLLTARRLAALLRLAVLLN
                     RAHEDAPLPALELTADDNRLSLIVPQAFIDARPLLRADLIGETDGIAGLGIQFRPFVA
                     "
BASE COUNT         3562 a         7048 c         7252 g         3515 t
ORIGIN      
        1 gccattgccg ccgccctgac cctcgcgccg ttcgccgcca gcgcccagga caacgaatcg
       61 ccctacagct ggaatgtcac tgcggtgtcg gactacctgt tccgcggcgt gtcgcagacc
      121 gacgaaaagc cgaccctgca ggcgggcttc acctacacct cgccggtcgg cctgtacgcc
      181 ggtgtttggg gctcgggcgt ggacttcgga ccgggcgacc cgaacaccga gatcgactac
      241 cagatcggct acggcgtgga cgtcaccccg cgcgtcaact tcgacgtgct gctgaaccgc
      301 tacacctacc tcggtgccag cagccagaac tacaacgagc tggtcaccac caccacgctg
      361 gacgagacct acaagctgat cgtggcctac accaacgacc agtggaacag cggtaccgac
      421 ggctggtact acggcgtcgg cggccagtgg ggcctgccgc aggacttcac gctgaacgcc
      481 aatgtcggcc gcagcagctt cgagaagggc ctggccaagg actacaccga ctggaacgtc
      541 ggcgtcagcc gcaagttcgg cctgttcgat gtcggcctgg gctactacgg caccgacggc
      601 aatggacgcg acaactccgg caagctcgca cacagccgcg tgctgctgac cgtggccatc
      661 ggcaagtaac gccgcaggcg ttacggcagg tgccaggctt gcctggcacg ctttgcgaaa
      721 aaggcgccca tcgggcgcct ttttcaattc cgcagtgttc ctgatcccgg ctggggggga
      781 gcccccttgt tgttcaaggg ggcgcgccaa cggcgcgggg ataaggaaac atgcgcggac
      841 tgattcaacg tgccgaaggc acgatggatc agttccagct caacacgacc ttgccggcct
      901 tgccttgttc catcaggtcg aagcccttct ggaagtcgtc gatcggcagc tggtgggtca
      961 tcaccttgcc gagcgggaag ccggacagca ccagctgggt catcttgtac caggtctcgt
     1021 acatcttgcg gccgtagatg ccctgcacgg tcaggccctt gaagatgatc ttgtcccagt
     1081 cgcagccggc gcccttgggc atgatgccga gcatggcgat cttgccgccg tggtacatgc
     1141 agtcgagcat gtcgttgaac gcacgcgggt tgccgctcat ttccaggccc acgtcgaagc
     1201 cctccatgtg cagttccttc atcacgtcct tcagcgactg gttggccacg ttgaccacgc
     1261 gcgtcgcgcc catgtcggcg gccagcttca ggcggaagtc gttgacgtcg gtcaccacca
     1321 cgttgcgtgc accgatgtgc ttgcagatgc cggcggcgat gatgccgatc gggcctgcgc
     1381 cggtgatcag cacgtcctcg ccgatcacgt tgaattccag tgcgcagtgc gcggcgttgc
     1441 cgtacgggtc gaagaacgcg gccagttccg acgggatctg gtcggggatc ggccacaggt
     1501 tgctggccgg catcaccatg tattcggcga aggcgccgtt gacgttgacg ccgatgccga
     1561 cggtgttcgg gcacaggtgc gggcggccgc cacggcagtt gcggcagtgg ccgcagacaa
     1621 tgtggccttc ggccgagacg cgctggccga tctcatagcc ggtcaccgcc gagccgagcg
     1681 cggcgatgcg gccgacgaac tcgtggccga tggtcaggcc cggcttgatg gtgcgctggc
     1741 tccactcgtc ccacaggtag atgtgcaggt cggtaccgca gatcgcggtc ttctccagct
     1801 tgatcaggac ctcgttcggg cccggggtcg gcaccggaac ctcttccagc cagatgccct
     1861 tggccgcttc gcgcttgacc agggccttca tcgtttgctg cgccatcggg gtggaactcg
     1921 tcagggggaa agcgcggatt atagggcgcc gcgcggattt cccatgttgc gctgcgggtg
     1981 cagtggcgga acgaaaggcg tgcgccgggg ggcatttcga acatggccgt tgtgctcggc
     2041 gggcatggcc cggcggatgc gtgagtgccg accaaggttg gctgctaccg gggcgtaggt
     2101 gcgcccgggc catgacttcc ggggttcggg gcggggcagg gtggcgggct acaatcgagg
     2161 gttccactac caggggccgc tccatgcgct cgaacctgct tgcattctcc atcgtcgcca
     2221 gccttgggct ggtccaggtc gcccatgccg ctgaaggcat gtgggtaccg cagcagctgc
     2281 cggaaatcgc cggcccgctg cagaaggccg gcctgaagct gtccccggag cagctgtcca
     2341 acctcaccgg cgacccgatg ggcgccgtgg tcgcgcttgg cggctgcacc gccagcttcg
     2401 tttcgccgca gggcctggtg gtcaccaacc accactgtgc ctacggcgcg atccagctga
     2461 attcgaccgc cgagaagaac ctgatcaagg acggcttcaa cgccccgaag cacagcgatg
     2521 agctgagtgc cggcccgaac gcccgtgtct acgtgctcga ccagatcacc gacgtcaccg
     2581 cccaggcgaa ggccgccatt gccgctgccg gcaacgatcc gctggcccgc agccgcgcgc
     2641 tggacgcctt cgacaaggcc caggtcgccg cctgtgaagc cgaggaaggc ttccgctgcc
     2701 gcctgtacac cttctccggc ggcaacacct accgcctgtt ccgcaacatg gaaatcaagg
     2761 acgtgcgcct ggtctacgcg cccccgggca gcgtcggcaa gtacggcggc gacgtcgaca
     2821 actggatgtg gccgcgccac accggcgact tctcgttcta ccgcgcctac gtcggcaagg
     2881 acggcaagcc ggcggcgttc tcggccgaca acgtgccgta ccagcccaag cacttcctga
     2941 agttcaccga ccagccgctg ggcgccggcg acttcgtgat ggtggccggc tatccgggcc
     3001 gcaccaaccg ctacgcgctg gccggtgaat tcaacgaaac cgccagctgg acctacccga
     3061 ccatcgccag gcactacaac gcggtgctga agatgatcga cgaggccggc aaggccgacg
     3121 ccgacgtcaa ggtgaagtac gccgccaccg cggccagcat gaacaacgtg gccaagaact
     3181 atgccggcca gctggaaggc ttcaagcgca tcgacgccgc tggccagaag caggctgaag
     3241 aagccgctgt gctggcctgg ctgaagaagc agggcgccgc cggcaagccg gccctggccg
     3301 cacacgcgca gctgatcaag cacctggacg ccagcaaggc gacccgcgag cgtgacctgt
     3361 tcgtcggcca gttcaacaac acctcggcgg tcagcgccgc tatcggcctg taccgcctgt
     3421 cgatcgagcg caccaagccg gatgccgagc gtgaagtcgg ctaccagcag cgcgacctgc
     3481 cgaccctgga aggtggcctg aagcagatgg atcgccgcta tgtggcgaag atggaccagc
     3541 agctgcagac ctactggctg gaccagtacg tcgccctgcc ggccgcgcag cgcaacaacg
     3601 atgtgctgaa cacctggctg ggcggcagcg atgccaacgc agtcaaggcg ctggtgggca
     3661 agctgtcggg caccgagctg ggcagcctgg acgcgcgcct gaagtggttc aaggccgacc
     3721 gcgccgcgtt tgaagccagc accgatccgg ccatccagta cgcggtggcg atcatgccgt
     3781 cgctgctgaa gcaggaagag cagaagaaga tccgcgaagg cgagtcgttg accgcgcgcc
     3841 cgctgtacct gcaggcactg gccgactaca agaagagcca gggcgagttc gtgtacccgg
     3901 atgccaacct gtcgctgcgc atcaccttcg gcaacgtgat gggctatgag cccaaggacg
     3961 gcgtggccta caccccgttc accacgctgg agggcatcgt cgccaaggac accggcgtgg
     4021 atccgtttga tgcgcccaag gccctgctcg acgcggtcaa ggccaagcgc tacggcggcc
     4081 tggaagacaa gcgcgtcggc tcggtgccgg tgaacttcct gtccaacctg gacatcaccg
     4141 gcggcaactc cggctcgccg gtgctggatg cgaatggcaa gctggtcggc ctggccttcg
     4201 acggcaactg ggaatcggtc agctccaact gggtgttcga tccggtgatg acccgcatga
     4261 tcgcggtcga cagccgctac atgcagtgga tcatgcagga agtggcgccg gcaccggagc
     4321 tgctgaagga actgaacctg gcgaagtaag ccggttgcgg tagtgccggc cgctggccgg
     4381 caaatcccaa agccccgcga cccacgtcgc ggggtttttt catgcccggc ccggcccggt
     4441 gcgccgaacg ggtatcatcc gtgttccgcg tacttcacag gatgtgaacg aaacgcggaa
     4501 cctcctcccc ccaggacccc ttgcacgcat gcgcatcctg cttgcccgcc acggcgaaac
     4561 gccgtggaac gccgaaggcc gctaccaggg ccagatcgac atcccgcttt cgccgatcgg
     4621 tgaagcccag gcccaggcac tgggtgcccg cctggcctcg gtggacatta cccgtgccgt
     4681 cgcctcgccg ctgtcgcgcg cgcagcgcac cgcgcagctg gcgcttggcg ctgcccgcgc
     4741 cgacatgctg ctgaccgagc cggagctgca ggaaatcgcc cacggcgaat gggaagggct
     4801 gctggccagc gagatccacg agaaggaccc gtcgcgcctg caggcctggc gcgaggagcc
     4861 ggacaccgtg ctgatgcccg gcggcgaatc gctgcggctg gtgctggaac gcagctggcg
     4921 tggcctggcc cgtgccaccg aaggtctcgg tgagcacgac accctgctgg tggtcgccca
     4981 tgacgcagtc aaccgggtga tcctgtgcaa ggtgctgggc ctgccgatct cccgcctgtg
     5041 gaccttccgc caggccccga ccacgctcaa cctgctcgaa ggcgccgatc tggacagcct
     5101 ggaagtggtg cgcctgaacg actgcgccca ccacacgccg ttcttcggcg aagccaagca
     5161 ccgcgccctc tgatccatcc cttcgcatca actgcttctg ctggaaccgc tgccgtgacg
     5221 aacaccccga ccaccctggc cgactggctg gactacattg aacgccagca cccggcgacc
     5281 atcgacatgg gcctggagcg cgtgcgcgcc gtggccacgg caatgggact ggacgtgccg
     5341 gccaagcgca ccatcgtggt cggtggcacc aatggcaagg gttccaccgt ggccttcatc
     5401 gaagccatcg cgcgtgccgc cggctggaag gtcggcgcgt acacctcgcc gcacctgctg
     5461 cgctacaacg agcgcgtgcg catcgacggc caggacgtgg acgatgcggc gctggtcgcc
     5521 gcgttcaacg ccattgaagc ggcgcgcggc gacatcacgc tgacctattt cgagtacggc
     5581 acgctggccg cactgcggct gttcgccgat gccggactgg atctggcggt gctggaagtg
     5641 ggcctgggtg gccgtctcga tgcggtcaac atcgtcgatg ccgatgtcgc ggtgatcacc
     5701 accgtcgaca tcgaccatgc cgagtggctg ggcgaggatc gcgaagcgat cggcaccgag
     5761 aaggccggca tcatccgcgg ttggaagccg gtgatcctgg gcgagaccga cccgccgtcg
     5821 agcgtgctcg cacgtgccta tctggtcggt gccaatgcaa tccgcggcgg cagcgactac
     5881 ttctacgagc cgatcgatgc ccagcgctgg cgctggcgtg atgtcggcat gcgcatggaa
     5941 ctgccgaccc cggccctggc cggcccgatc cagcttgcca atgccggtgc cgccatcgcc
     6001 gcgctgcgcg cgctggacaa gccggtgccg cgtgccgcct gggccgccgg tatcgccgcg
     6061 gcgcgcatcg cgggccggat gcaggcgttc gagcgtgatg gcgtgcagat ccgggtcgat
     6121 gtcggccaca acccgcaggc cgcgggccag ctggcgcgcg cattgaaggc cgaagtggtg
     6181 cccgggcgca ccctggcggt atacgccgcg ctgcaggaca aggacgcagt gggcgtggtg
     6241 caggccctgc aggacgtggt gggcgagtgg atcctggccg ggctcgatgg cccgcgtggg
     6301 caggatgcta cccagctgca ggcacgcctg gccggtaccg tggccgcctc ggcagcactg
     6361 gccggcagcg tcgagcaggc gctggcacag gtgctggcgc aggccgggcg cggcgaccgc
     6421 gtgctggtgt tcggctcgtt ccataccgct gcggccgccc tgcactggtt gagcggcgaa
     6481 gcctgatctg cgttcagcca acgccgacgc cgtccggtcc ggcacccgta taatcgatgg
     6541 caacctccgg acagttgcct gcctcacgtg gatacgcccc tgaaacagcg tctgattggt
     6601 gccatcgtgc tggtggcgct ggccgtgatt ttcctgccga tgctggtcaa ggggccggca
     6661 cctgacagtg gtgtcgccaa tgtgccgatc gccgcaccca atgcgccggc cgatggccag
     6721 ttcgaaaccc gcgagctgcc gctggtcgcg ccggcaggcg gcgccaccgg gctgcagacc
     6781 ggccaggcca ggccggtgca ggaggctgca acgcctgcct caccgccgac cgtggacacc
     6841 tcgccggcgg ttgccgccgg caactatgcg gtcaccttcg gcgcatacgg cagcaaggcc
     6901 gacgccgatg cggtgattgc ctacctgaag cgctcgcagc tgccgggctt cgccgagacg
     6961 gccaccatca acggccgcca ggcgtggcgc gtgcgcgtcg ggccgtatgc ggaccgcgcc
     7021 caggccgagg ccgcgcgcct gcaggcggtg aagatccgcg ccgacgtgaa ggccgaagtc
     7081 attgccctgg atgcgcctgc ggccaacagt gccgccgttg ccgcgactac ggccccggct
     7141 gcatccagcg ccagcacacc ggctgcagcc actgcaccgt cggccagtag caatccggtg
     7201 cgcagcgaaa gcctgccgcc gagcacgccg acggccacca ccactccggc aaccaggccg
     7261 gaaccgccga agccggcgcc gaagcccgag gcggcgaagc cggaagccaa acccgagccg
     7321 aagcccgatg cgacggccag caagccggcg acggccccgg cgacgccggc ggcaccggcc
     7381 gccagcggcg tcggctttgc cgtgcagctg ggcgcgttcg gccaggccaa cgatgccaac
     7441 gcgctgcgtg acaaggtccg cgccgccggc ttcagtgcct tcgtcgagca ggtgcgcacc
     7501 gaaaagggca ccctgcaccg cgtccgcgtc gggccggtgg ccaaccgcgc cgatgcggag
     7561 cagctcaagg cccaggtcgc cgccaaggtc ggcgtggccg gcatggtccg accgcacccg
     7621 tgaccgcgcg cgtcgcccgc tgcagccacc ggcaggagcg ggcggcgtga tcgatatcgt
     7681 gctgggcgtg ctgatcggcg cctccgtact gttcggtttc atccgcggct ttgtaggcac
     7741 ggtggtcgcg ctggtgtcat ggttgctggc cggctggatg gccttcacct tcggcaatca
     7801 agcctcgcac tggtgggccg ccccccaggc accgggtacc ggccactatc tggccggata
     7861 cctgggcgtg ttcgttgtga ccgtggtggt ggtggggctg atcggcctgc tgctgaaggc
     7921 cgccatcaag ctgaccctgc tcggcggcgt cgaccgcctg ctcggcggta ccctgggcct
     7981 ggtccgcggg ctgttcctgt ccagtgtcct gttgctgttg gccggtttca cggcgctgcc
     8041 gggcgaaccg gcctggcagc agtcgcagct gcggcccgtg ctgcagccgg ccgtggcctg
     8101 gatgcaggcc cagctgccgc aactggacga actgttgccg caggccctgc cactggacgg
     8161 cctgttgcct gtgcagctgc ccttgcccct ggccgagaat gccccatcta caccgcaggt
     8221 gttgggcaag ccgacggcga caggcgataa tggtgtcctc aacgcggtag tggcgggtgg
     8281 cggatggccg cagcccgtgg acgtggagcg ggagccccgg ccggccccca cactgcccag
     8341 caacatcgag ccggcgcctg cgcgtccggc gcggcccgcg cctgctgcgg gcgccccccc
     8401 aggccaggta cggccacctt ccctgtaact gggcacagcc cagcggagac ctcgcaccat
     8461 gtgtggcatc gtcggaatcg tcggcaacca gaacgtcgcc gggcagttgt atgacggctt
     8521 gaccgtcctc cagcaccgtg gccaggacgc ggcgggtatc gccaccgcca gcggcagccg
     8581 cctgcgcgtg cagaaggcca ccggcctggt ccgcgatgta ttcgatgcgc gcaccatgtc
     8641 gaccctggaa ggcagtgtcg gcatcgccca tgtgcgttat cccaccgctg gttcggaagg
     8701 catggacgag gcacagccgt tctacgtcaa ttcgccctac ggcattgcgc tggcccacaa
     8761 cggcaacctg atcaataccg aggcgctgcg ccagcaggtg ttcgagcagg accgccgcaa
     8821 cgtcaacacc gattcggaca gcgaagtgct gctgaacgtg tttgcgttcg aattggacgc
     8881 acagcgccag ctcagcccgg aagccgcgat ccgcgcggtc gccggcgtgc accgccgctg
     8941 caagggcggc tacgcggtgg tcagcgtggt gctcggcctg ggcctggtcg ccttccgtga
     9001 cccgcatggc atccgcccgc tggtgctggg caagcgcagc cacgccgagg gcgatgagta
     9061 catcgtcgcc tccgagtcgg cggcgctgga cgtgctgggc ttccagcgcg tgcgtgacgt
     9121 gcagccgggc gaagcgctgg tgatcaccgc gcgcggcgag ctgttctcgg agatctgtgc
     9181 cgagccggcc gagcacaccc cgtgcatctt cgaatacgtg tatttcgcgc gtccggattc
     9241 gatgatcgac aacgtctcgg tgcacaaggc gcgcatgcgc atgggcatca agctgggcga
     9301 gaagatcctg cgcctgcgcc cggaccacga catcgacacc atcatcccga tcccggatac
     9361 ctcgcgcgat gcggcgctgg agatctccaa cgtgctcggg gtgaagtacc gcgaaggctt
     9421 catcaagaac cgctacatcg gccgtacctt catcatgccg gggcagggcg agcgggtgaa
     9481 gtcggtgcgt cgcaaactca acccgatcca cctggagttc cgcaaccgcg tagtgctgct
     9541 ggtggacgac tcgatcgtgc gcggcaccac cagccagcag atcgtgcaga tggcccgcga
     9601 tgcgggtgca cgcaaggtct acctggccag cgcggcgccg ccggtgcgct tcccgaacat
     9661 ctacggcatc gacatgccgg ccgccgaaga actggtggcg cacaaccgca cggtggaaga
     9721 aatcgaagcc cacctgggct gcgactggct gatctaccag gatctggaag acatggaagc
     9781 ggcggtgagc gaaggcaacc cggcactgcg caacttcgat tcgtcctgct tcaacggcca
     9841 ttacccgacc ggcatcgaac cgggctattt cgagcgcatc cagcagctgc gttcggacga
     9901 cgccaagcac aagcgccgcg cctgaggccc aggcgtgatg gacgtgcccg aggttggagg
     9961 cgacctgctg cgcgccgcgc agcggtgcct ggccgaagcc gatccgctgc gcaaggtcgc
    10021 gctgacccag gcctgcgccg ccgcgttccg tgccggccgc ctgaaggtgg ccgctgatgc
    10081 accgccgccg gagccgatcc gcatgccggg ccggccagcg cagctgcggc tggtgcatcc
    10141 gcgtgaagtg ccgcggcgcg gactgggcgg cgtggagggg cgtgccgcct tcatccacgc
    10201 cattgcccac atcgaactca acgcgatcga cctggcctgg gatgcggtgt accgcttccg
    10261 cggcctgccg ccggcgttcc acgccgactg ggtcagctgt gccgacgacg aatcgcggca
    10321 cttcatgctg ctgcgcgagc gcctgcaggt gcacggtcac gattacgctg atttccctgc
    10381 gcacaacggc ctgtgggaaa tgtgcgagaa gaccgcgcat gacggcctgg cacgcatggc
    10441 gctggtgccg cgcgtgctgg aagcgcgtgg cctggacgtg accccgggca tgatcgagaa
    10501 gctgcgtaat gtcggcgatg gcgataccgc cgatgtgctg gaagtgatcc tgcgcgagga
    10561 agtcgcacat gtcgcggccg gatcgcgctg gtaccgctgg tactgcgacc gcgccggtgt
    10621 cgagccgcgc gcgcgtttca aggagctgct gctggagtac gccggcggct acctgcatgg
    10681 gccgttcaac atcgaagcgc gcctgctggc cggcttcgat gccgacgagc tcgccaacct
    10741 ggtcgagcag gccggttgag aaaaagggga cggaggtaat taagtcgctt atggcacaaa
    10801 cgacttaatt ccctccgtcc cctttttcat gcgttcggca gcaccacgcg cttgccatcc
    10861 acggtcggcc ggttgatgta gaacagtccg gggcccggtc gatacggcag ctcgctgacg
    10921 ccggcgtcgg cggcgtaggt cagtgcggta tcgcccaggg catcgaaatt ccagtgtgcc
    10981 gactgcatca ggtagcgacg gcgcagcagc gcttcctggg tctgggtcag tgcctgcccg
    11041 gcgaccaggc gacgcgcgat cggctgcagg gcggatggaa gttcccagcc ctggaccctg
    11101 gcggcctgcg cacgccattg cacgccagca tcgatcgcat gctgctgcat cacctgcagg
    11161 gcgatcagct ggtagcgcca gtcgatgcgc ctgcgcagca cgaccgcggc ggtgacgtac
    11221 agcacgggtg acaacagcac gctgcggctg ccggcccggc gctgctgctg ccattggtgc
    11281 cagacatcca cccagatttc cttgtcgccg acgcccagct gctgccgcca gcgctccgca
    11341 tcggcctgcg tttcagcgta ggcggtggtg gcctgcagca tcgccagcgg cggtatctgg
    11401 tactcagcaa cagcggggcg acgcagctgc tgccgccgtg gccggctgag cagcttgggg
    11461 ccttcctcaa gctggttgta accgccaccg atgttggcat gcaccccggg cagggcgatc
    11521 tcggtgaacg gcggtgccac gctggtcagc gggtagtgct ggcgatgttc gtcgcgcgcg
    11581 gtgagctgca cgacgtgcgc ggcgatgtca ctgcgcagag cgaggtgtgg ctgttcatcg
    11641 gcgcggccgc cactgaccgc gaccacggta tcgaacaggc cgatgaagcg cacgaccggc
    11701 accgcggggg cgaagtcggc ggcacaggcc aggcccgccc cctgcagcag ctggcgccag
    11761 cgtgaaccgt cccagccctg cagctggttg gcgatatcac gcgccgcggc ggcgcctcgt
    11821 gaaaagccga acagatccag ctgcacgcgg cgcagcggct gtcgccagcg cgcggccagc
    11881 ccggccagtg cagccggcag cagaacctgc agcgcgcgct gcaccttcgc acggacgccg
    11941 ctggcaccga tgccgaaggc cagtccgatc agatcgtcgt cggcatcatc gcgggtgccg
    12001 accccttcca catagatcga cagcgagggc gtggccacgg catcgcggcg gctgtccgga
    12061 tacagctgct gcagccgggc gatgttggtc tcaccgttgt cgtagctgct ggtcagccgg
    12121 ctctggtagg tcgagtcatc atccgcgcgc agctgcaccg ggcgtggatg cggctgctgc
    12181 gggcgaccgc gggccaggtt gtgggcgttg ttgcgggtgc catcgaagaa caggccgatc
    12241 cgcagcaagc cgacatcttc gtccgtgtcc tgcgatcgtg ccatgtgcat tcctcgtcgt
    12301 ggccgcgtca aagtagcgcg aaaaatgtgt atttgcgatg tgtagtgacg cttttgacct
    12361 gactgaacgc agatgcggtt gatcacaatt cctgattttc attcgcatca actattgaat
    12421 tcacacgacc cgcgcaggcc atatggccaa acccggcaaa cccgggcgtg ctgcatcaac
    12481 gctgttcaca tcattcaagg agcgacgcaa tgttgtccag atcgattggc aaagcggcag
    12541 gtggcctggt gttgggtttg tcggtggcag cggccgcgca tgcggcaccg ttgttcgagc
    12601 cggtgacggt catcagccgg gcatcggcaa acagtgagcc cgcgctgggc aagctgctgg
    12661 ccaccccgtc tactgcgacg gtgcaggaag tccgtgtcga cgcagcggcc actgcgcagc
    12721 cacaactgga gttcgagctg cttggccagc gcgtgcaggc agtgcgcagc aaactcgagg
    12781 cgctgcccga tggtggcagc atctggtacg gccagttccg ctcgccttcg gacaagctga
    12841 ccgcggcaac ctccaacgga caggacgatc ccggcaactc gctgatcctg gtgcgctcgg
    12901 gcaacaccat caccggttcc atccgcaagg acggcaagct gtaccggttg cgtccgctgg
    12961 gcaaccgcca tgtgctggtg gaagtggatg agtcgcggat gccggccgac catccggccg
    13021 attacaacca gctgccgaag atcccgatgg gcgaaaacga tcgcatcggc attgcgcagg
    13081 cctcgtccgg tacccccgcg acgatccgtg tgctggtggt ggcgaccaat gccgcggtgt
    13141 cggcctatgg cggcaacatg cagtcgctgg tgcagctggc ggtggccgag tccaaccagg
    13201 gctacgtcaa cagcaacgtc ggcatcacca tgcagctggc cggttacgag accaccagct
    13261 acaccgagtc gggcagcttc gataccgacc tggcgcgctt ccgtggcacc agcgatggct
    13321 acatggacag catccatacc agtcgcaaca ccaccgccgc cgatgtgggc gtgctgctga
    13381 tcaacaacac cgcctactgc ggcctggcct cgggtatcgg ctcgacggca tcgaccgcgt
    13441 tcgcggcggt gtactgggat tgcgcgaccg gctactactc gttcgcacac gagatcggtc
    13501 acctgcagag cgcgcggcat gacatcgcca ccgactcgag cacctcgccc tatgcctatg
    13561 gccatggcta tcgctatgag ccgtcgacgg gtaccggctg gcgcacgatc atggcctaca
    13621 actgcacccg cagctgcccg cgcctgaact actggtccaa ccccaacatc agctacaacg
    13681 gcatcccgat gggcaatgcc agcaccgccg acaaccagcg cgtgctggtc aacaccaagg
    13741 ccaccatcgc ggccttccgc tgagtccagg cgccgaccaa ggtcggcgtc tacccgggcg
    13801 cgtttacctg ctccggtaga tgccaacctt ggttggcaac ctgcgatcga tcatttgcgg
    13861 gccagcgtat ccagcgacca gccgctggca tccacgcgca gcaccgaacc ctgttcgtac
    13921 cagtcaccca gaacgatgcg ggtacagccg cgtccaccgg cctgcagcga gtggattgcc
    13981 gggcggtggg tatggccatg gatcatggtg tccaccccgt gacggacgaa ggtggcctcg
    14041 acttcggcag gggccacgtc ggtcaccgac tcgaactgcg cacggtcttc ctgcttcatc
    14101 tcggactggc gcgcctggct ggcgtcgcgg gccttctgtg cgaaagcgat gcgtgccgcc
    14161 agcggctgtg acaggaactg cgcctggaac gccgggtcgc gcgtctgcgc acggaactgc
    14221 tggtagggga tgtcatcggt gcacagcagg tcaccgtgct gcagcagcac cgggcggccg
    14281 tacagctcga tcaagcacgg gtcgggcagg atgcgcaggc cggcacggcg tgcgtagtcc
    14341 tcgccgagca ggaagtcgcg gttgccgcgg atgaagtaca ccggcacgcc gctgtcggac
    14401 agcaccttca gcgcattggc caccgcgtcg gcggcaggcg agggcgtgtc gtcgccgatc
    14461 caggcttcga acaggtcgcc gaggatgtac agggcatcag cgccgggcgc ctgctcgcgc
    14521 aggaagcgca ggaacaggtc ggtgatttcc ggacggctgg ggtccagatg caggtcggaa
    14581 atgaacagcg tggtcatgcc tgcattctag gccatccacg atgacggtag cgccgggcca
    14641 tgcccggcgg ccgtcacacc ggcagcggca accaggccag gctggccgag gccagcagca
    14701 ccgcgatgcc ggtcgcggcc agcacgtcgc tggggtaatg caggccgagc accacccgcg
    14761 acagcgcaac gccagcggtg aacggcacca gcagcggcgc cagccacggg tagtaagcca
    14821 gcgcgacaat ggtgaacgac accgcgtgca gggtgtggcc ggaggggaag ctgaactcgt
    14881 ccagcggtgc cacccaggcg cggatgcgca ggtcggccgc gtacgggcgc gggcgccggg
    14941 tccagcgctt gaggcccttg tacagcagca gtgcggccag gccggtggcc gccatgtgca
    15001 ccgaggcgcg caggccgtcg aagccatcca gcagcaccag cgcgcccatc agcacgtacc
    15061 agaacacgcc atcgccgagc cggctgatga ccgagaacag gcgacgcacg cggcgacgcc
    15121 ggcagtagtg gttggcgcgc ctgcacaggc gcgcttcgcg gtcggccagc aattcaagcc
    15181 gcgtggtgcg catggccgct cctccgcgag tgggccagct cggccagcag ggcatcgaat
    15241 tcggcgacca cctgctgtgg atgcaggcgc ttcatcgcgc gcgcggcgtt gctgcccagc
    15301 atgtggcgtt gcgcatcatc ggcagccagc cgcacggcgg cctcgacgaa ctgctcatca
    15361 ttgtccactg ctgcgccatt ctcgccgttg cgcaggtact cgcgtgcggc gccataatcg
    15421 aaggcgacgg tggctacacc gctggccatg ctttccagag tcacgttgcc gaaggtctcg
    15481 ctgcggctgg ggaacaggaa caggtcaccg ctggcgaaat gccgtgcaag cgcttcgccg
    15541 cgctggatgc cgcagaagat gaagtcagga ttctcgtgcg ccagcttttc gcgtgcagga
    15601 ccatcgccca cccacacgaa gcgtgccttc gggcggatct gctgcagctt gcggaacgcc
    15661 tttacagcca ggccaaggtt cttttccgcg gcgatgcggc caacgtagat cgctaccagg
    15721 ccgttgccgt ccacgcccca ttcctcgcgc agtgccgggt cgcgcctgcc cggatcgaac
    15781 tgctggctgt cgaccgcgcg tgccagcagg cgcacacgct cgaaaccctg ttcgccaagg
    15841 aactgctgca gctcgcgggt cggcaccagg gtggcatcgg cctggttgtg gaaacgacgc
    15901 atccagcgca tcgcggcagc ctgcagccag gccacgccgt agtcgggcag gtactcgtcg
    15961 aagcgggtgt ggaagccact ggcgaccggg atgccgagac ggcgtgcggt acgcagtgcg
    16021 gaccagccca gcgggccttc ggtagcgacg tagacggcgt ctggacgctg ttgctgccaa
    16081 tggcggccca gccggatcgg cgccggcagg ccgaagcgca ggccggggta gcggggcagc
    16141 gcggcgccgg gaaccagcag cgtgcccggt gccgagtcca gtgcttcgct ggcctggcgc
    16201 ggtcggacca ggtcgacttc atggccggaa tcacgcagtc cctgctccag gccctgcacg
    16261 gtgagggcaa cgccgttcac ttccggcgga taggtctcgg tgacgatggc atagcgcatg
    16321 gcgggcctcc gggtttccgg catgctcggc tatggcgatg tagtggacat gacggctttg
    16381 cgaccgccag atgacgcagg tgccggccac cgtgggcaag aaaaaaccac ggccccgagg
    16441 ggccgtggtt cctgttgcag atgacagcgc gatggatcag aagcgctgct ggtacttcat
    16501 gtacatgaag cgtccgatgt cgtagccacc gtagtaggag aacgacgagt tcggcttgct
    16561 gtacatcacc ggggcttcct tgccgaacac attgttggcg cccaccgaca cggtggcgtc
    16621 ccacggcagg ttgtagcgga actgcacgtc gtggaaggtc actgcaccgc gctcgttgta
    16681 ggcggtcggc gccttcagcc acggcgccag gaaggtcgga tcggagcact cgtccggata
    16741 caggctggca ttggcgcaac gctccttcac gccggagtag tagcgcgctg tccagctgac
    16801 gccgaagtcg cccacatccc agcccagcac caggttcgag cgcacgcgga acgcgaggct
    16861 ggtggcggtg ccgatggtgt tggcaacgcc gttgattggc gtgatcgcat cgcggacatc
    16921 gttggtggag cgatagacgt tcttgctcac ataggtactg gtccagcctg cgctcagctt
    16981 gccgtagctg gtgtcgacgc ggtagctgac atccaggtcg taaccttcgg tctcggcgaa
    17041 gccggcgttg cggttgccga acttcaggcc ggtgacgatg ccgttggacg ggtcgcgggt
    17101 gaagcggctg cagcgtgctt cgatgccctg ctcgtagcaa tccttcagga tctggttcgg
    17161 gctgtcaccg acgatggtgt tgtcgatgcg gatcttccac cagtccagcg cgacgttgaa
    17221 gttgctgatg aaggtcgggc tccacaccag gcccagcgtc ttgctggtgg aggtttccgg
    17281 aaccagcagc ggattggaac cggacacgaa cggcgtcggg gtcgcatcct gcgccgtggt
    17341 caccgggaca ttgccctgct tcagctggcg gaagttggcg gcatcagcga tgtcacgtgc
    17401 acagcgggcg cggacttcgg cactgccctt ggacgagccg aactgcgtgt cgcacggatc
    17461 gctgaactgc gcgaaggttt ccgaaccgcc accgtacagg tcgttgatgg tcggggcgcg
    17521 gaagccttcg gcccaggtac cacggaccag cagctggtcg atcggcttcc acttgaagcc
    17581 gaacttgctg ttgagggtat tgccgaaggt gttgtacttg gagaagcggg tggcggcatt
    17641 gaagctcagt tcgcgcgcgc cgggcaggtc ggccagcacc ggtacgttga gctccaggta
    17701 ggcttccttc acgttgtagc tgccaccggt cgggccggcg gccaggttgg tggtggcgcc
    17761 ggtctgggcc agggcatcgg gggtgtagcg cccgtcttcc ttgcggcttt ccacgccgaa
    17821 ggcgaagccc aggtcgccgg ccggcagggt catgatgctg ccggacaggt tggcgaaggc
    17881 gttcttggtg gtggtccggc cggtggtccg ctccgccggg aacagccagg ccatcagttc
    17941 ttcattgccg gtcagcccgt tcggatcgtt cctgccgtag ggcaccagcg gattccacgg
    18001 cttgcagccg tcgatcaccg cacccgggcg gccgcacatc accttgccgg tggccggatc
    18061 caggaacgac ggacccacgg cgtcacgcac gcgcttcttg tgcaggttgc cggtagcggt
    18121 ggcggtcagc tcgttgcggt tgtactggta gcccacgtcc cagtcgaagt agcgctggcc
    18181 gatctcgaag gtgccatcca gcgaaacgac cgcacggtag gtcttcagtt cgctggtgct
    18241 tacacgcgga atttcccagg tacggcggtt ccacgcgatg tcggtcggcc gggcataacc
    18301 gtgctggttg ccgaacggat tgaaatagct gtccttggac atcaggccgg tggcggtcgg
    18361 gtcacccgag atcgacaccg agctggactg cagtgggtag cctgcgatct ggcgctcggc
    18421 cgaacgcttg ttgtagccga attcggtgcg caggttgacc tggtcggtga tcttgaagcg
    18481 gccgtcgaag tacaccgaat cacgcttgag cggatacatc acgtgcatct gctcgttggc
    18541 gttgctgacg tcgccggtga acggcgtcgc gtcggtcagg tggtagttgg ccgggttggt
    18601 cgggtcagcg ccgcggttga gcgagtagcc gcaaccctgg ctggtgttgg tgcagccagg
    18661 gccacccttc agaccggtga actggcccca ctggctcagc gtggtccagt tggagggatc
    18721 gttcgggtgg cggtcgctca cgccgtactt gctgaaccag cggtccttgg cccagacgct
    18781 cttttcctcg gagtgttcca gtgccagggt caacgacaca cggtcattgc tccagccgcc
    18841 gaccacgtcg aagcggtcac gggcgccatc gccttcgctg tactggccgt ggtagacatt
    18901 ggcggtcacg ccgttgacgt tggaacgggt gatgatgttg atcacgccgg ccatcgcgtc
    18961 ggaaccgtag atggccgaag cgccatcctt cagcacttcg atgcgctcca ctgccgacac
    19021 cggcagcgac gacacgtcct ggtagccgga ggtgctgatg cccaggcgct tgccgttgac
    19081 cagcaccagc gtgcgctgtg cgcccaggtt gcgcatgtcg atgtaggtgc cgccggtgtt
    19141 ctcgcccgcg ctcagcgcgt tggcgcggct gatggccggg ctgcccatcg cggtgacgtt
    19201 ctgcaggatg tcggccaccg agctgaagcc ctggcgctcg atctcgacgc gggacagcgc
    19261 cagcaccggc tgggaggttt ccacatcgac ctggcggatg cgcgagccgg tgatctcgat
    19321 gcgatccaga ttggtcggcg aggcgccgcc agcatcctgg gcgaatgccg gcacggcggc
    19381 cagagcggtg gtcgtcacca gggcgtgggc aatcgccttg cccaacacgg tacgtgaagt
    19441 cattacgttc tctctctctc aaagacgtac ggagatgccc aaggaaggca tccaatggcc
    19501 cagccgaact gcgccggtgt tccgatacta gtctcgatag ttaagaggtt gtaaagaact
    19561 tatgtcgaaa gatttccttg catgtcatcg gtgtgatgaa tatgtgagga aaaaccagaa
    19621 cttgcgacgc aagtgcccgt cgccaccaag gccgcgatgt tgcggcgcag cgcaaattgg
    19681 cgcgtgggac gggcgtcgtc ccggcaggat caggccacga acggacggaa ctggatgccc
    19741 agcccggcga tgccgtcggt ctcgccgatc aggtcggcgc gcagcaacgg gcgggcatcg
    19801 atgaatgcct gcggcacgat cagcgacagc cggttgtcgt cggcggtcag ttccagcgct
    19861 ggcagcgggg cgtcctcgtg cgcgcggttg agcagcaccg ccaggcgcaa cagggcggcc
    19921 agccgacgtg cggtcagcag caggcgctcg ggcagggcat cgaaggcggt cttggtgatg
    19981 ctgcggcggt ggctgcgcac gagcgcggcc agcatctgct gttcctgccg cgagaaacca
    20041 gcgatgtccg agtgttccag cacgtagctg ccgtgcacgt ggtagccgct gtgcgcgatc
    20101 atcaggccca gctcgtgcag gcgtgcagcc caacccagca tgcgggcatc gtcggcatcc
    20161 agtttccagt gttcctgcac ctgctccagc agtgacagtg cggtctcctg cacgcggtcg
    20221 gcctgcgtca tgtcgatgcc atagcgctgg ctgagcgcgg ccaccgattc gtcacgcaga
    20281 tcgttctcgc cggcacggcc gacgatgtca tacaggatgc cttcgcgcat cgccgccttg
    20341 ctgaccagca gcttctgcag gcccagagcc tggaaggccg cttccagcac caggatgccg
    20401 ccggcgatga tcggacgtcg gtcgctggac aggcccggca actggatgtc gtcgatcttc
    20461 ttggctttca gcagttcgtc gcgcagctgt ggcagggctt cggcggtgat cgcgcccttg
    20521 ctcagcttca tcgtcgcgca gatctcgctg atcgccttgt gcgtgcccga agaacccagt
    20581 gcttcctgcc agcccagcgc acggtacttg ctggcgaagg gctggaactc gcggccgatc
    20641 tcggccagcg cgtccttcca gcgcttcttg ctcagcttgc cgcccgggaa gaatcggcgg
    20701 gtgctggcga tgcagccggc ctgcaggctt tcgcgctcga gggtctgcat gcccatgccg
    20761 atgatgaatt cggtggagcc gccgccgatg tcgatcacca gccggcgctg gccgggcttg
    20821 ggcggttgtg catgggcgac accgaggtag atcaggcgcg cttcttcgcg accgctgacc
    20881 acttcgatgg cgtgccccaa agcggtctcg gccgggacca ggaacgactg cggcgagcgc
    20941 agctggcgca cggtgttggt ggccagtgcg cgcacccggt gcggtggcac gttgcggatg
    21001 cgctggccga agcgggccag gcactccagc gcgcgttggc gggccgccgc ggagagtccg
    21061 cccttgccat ccagcccgtc ggccatccgc accgtctcgc gcaggcggtc gatcacccgc
    21121 agctggccga gcgtgtagcg cgcgatgacc atgtggaaac tattggagcc aaggtcgatg
    21181 gcggccagca ggtcgccatc ctgcaatgcg ggcggagtcg tggtggtatg cggcatggac
    21241 gaatgttagc cgaaggagcg gtgtgctcgt caccgcgcgg ccttcacatt ttggaagagg
    21301 agagtgcggc agggctgcgc cctgcacctg ccgaatcaac ggcaacggca aaagcgggct
    21361 atccgtggga tggcggg
//
LOCUS       DAOKIP010000050        21255 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.050,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000050 DAOKIP010000000
VERSION     DAOKIP010000050.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 21255)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21255)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21255
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.050"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            68..1825
                     /gene="recJ"
                     /locus_tag="QEL58_001639"
     CDS             68..1825
                     /gene="recJ"
                     /locus_tag="QEL58_001639"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005416380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded-DNA-specific exonuclease RecJ"
                     /protein_id="HDS1676117.1"
                     /translation="MSLAADAVQPSTDTVTIRRRDAVAPGNWPDGTLPLLVRLYASRD
                     AGTPELALPKLGNLHAPELLTGIDAAVGLLVEAIANDKRILVVGDFDCDGATACAVGV
                     RGLRMLGAQHVFHAVPNRMVHGYGLSPSLVDELAALQPDLLVTVDHGIACHAGVTAAK
                     ARGWQVLVTDHHLPGPQLPPADVIVDPNLDGDAFPSKSLAGVGVIFYVLMALRRQMRE
                     AGVFADGKGPDLTTLLDLVAVGTVADLVALDPNNRALVSAGLRRLRAGQGCVGLRALI
                     EASGRDAARLTATDIGFALGPRLNAAGRLEDMALGIALLLTEDPRQARDIAQTLEQIN
                     SERRAVQQSMTDDAEQALTRVVLDMAGQRPVAACLFDADWHPGVVGLVASKMKDRLHR
                     PVIAFAPAEPGADTLRGSARSIPGLHIRDALALVDARHPGLIERFGGHAMAAGLSLRL
                     DHVDDFKAAFIAVVLEMLDPAALQQQVLSDGELAADELDHRHAVALRLAGPWGQGFPE
                     PLFDGHFEVANWRVLKERHLKLELRLPGVPGTINAIHFGGWHGNAPGRHVHLAYRLAC
                     DDYRGGSAIQLIVEHCLPG"
     gene            complement(1878..2945)
                     /locus_tag="QEL58_001640"
     CDS             complement(1878..2945)
                     /locus_tag="QEL58_001640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014507605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1176 domain-containing protein"
                     /protein_id="HDS1676118.1"
                     /translation="MRQFLPIALLALVTPPAANAGAPSSRLYFQHHDWVVACDNTRTC
                     RAAGYAADEQSTLSVLLTRKGGANQAMQGRLSLQPDEGQARPAGVLRLHVRQQDLGVL
                     VADQGEGTYTLSAAQTAALLSALVRDGGISVSDATGQRWALSDKGAAAVLLKIDEYQG
                     RLGTPGAVMRKGSTPEASVPAPLPVPMVHSAPTADSIPDDPAFAQLAASPALRAALRA
                     TLKDNSCEGLLEADADIPLSNSALEIRRLDAQHVLVNVPCWRAAYNTGDGYWVARPKA
                     PFQPQWVTSDAIDYDDGQIIAAQKGRGLGDCISQSTWTWTGTAFVATSEIAAGLCCGV
                     PGGTWELPTLVTEVEKGDGGD"
     gene            3174..5417
                     /gene="tssI"
                     /locus_tag="QEL58_001641"
     CDS             3174..5417
                     /gene="tssI"
                     /locus_tag="QEL58_001641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019300515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system tip protein VgrG"
                     /protein_id="HDS1676119.1"
                     /translation="MYAESLLPGATLQRLHQDRRLIRVETALDPDTFLVKRFDGAESV
                     SAPFAYRIDLLSIQPRLELKQLVGQPLRLQLGDEFGNRSVHGYVREFASSGQQAQFSA
                     YRAELAPWFAFLDYTCNCRIFQDRNVLQIIEEVFEGYAQLARFRYDLNAGKLAPLPYC
                     VQYNESDFAFVSRLLEDAGLYYSFVHDEEGHEMVISDDSTLSTAHGEPQPIAFVSDQG
                     TLASTGLHRWGARRRVGPSVQTLRSFDFKQPGERLDGNQGNQVPLGLLPPLEQYRYDG
                     AARFMNSRIGTALAAVRNEEVTWPTKLFECAGNAGEMEAGGCFDLERHPDFIGRDDTD
                     RSFFVVSMQREGHNNFAADFGSAEAPSVEVQAEVLRRHIPYRPLRLTPWPRMPGPQTA
                     TVVGPPGEELHADRYGRVKVQFHWDRQLDRRENASCWIRSASPWAGADMGGVSPPRVG
                     QEVIVDFLDGDPDRPIITGRVYNEDNMPPFGMEVSGLKSKTVKGAGWNEITMHDGAGG
                     ELLNMRAQRDMVTTVLNDQNASINNNKSTTVAVNHTMGVGANQDISVGGNRGITVTGT
                     DMLGVTGTRTTNVTGAVTEKYETGETKTIAAAGYTETITGDFKTTLTGNYTSQRTGTW
                     TETVTSTSSRTVGGLVTETLQAAREVTITGQDKRKVQGKVDDSNVGERVIDVTGNFSQ
                     DASGTHSQGSDGAMSLESAVKLTSKVGGSVIEITDSAIKITAGGSEVVIDAGGVSVNG
                     SEIKLNC"
     gene            5437..7053
                     /locus_tag="QEL58_001642"
     CDS             5437..7053
                     /locus_tag="QEL58_001642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012444471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676120.1"
                     /translation="MQDTPMLRGLNALRDAWLEASADGSRRLLVWRLPAAASRLLAAF
                     FEMQRNDAGRDTPDYFLRIDTAYELGFRYSRQLKQDLLERYVASQEDLRAQQVPLGWR
                     GPHEGHPDSAQGVVEVLESFIDHHGEHLRLLAAVLEPERSVPGEGFERWVDAALAAGP
                     GPRLRLVLVDTEEDPRWQSLLERHGRIARVVSAPVDMFGIARDTAAQSGGRGPEVLYR
                     QLLADLMLLLERGSPSQVVARAERAQGLAQRHGWQDQQSVVQMMVAGAWLKHGDHGQA
                     INSYRQARSAAEGARMSGNPAAPELVMQSWFGEAGCWLAAKQPERAAQTYLQASTSAA
                     SIPHPMFALEGQRMAGWCQLQAGQREAARTQLLEAIRIAKPLAPADRKATTLPQALWD
                     LLQLQDARRCESLQQVAADYLQASTGLLEKADAQGHALGPRPVRPALDAVDAELDAAL
                     ERGFHRAQQERERLIQGGDEFFRKIVAVGRDFLDPGWNGLPAIEHPLDHEIPVWSEPP
                     AMQPLPDPSGLLQASVAAPAGPAVTGVAVA"
     gene            7198..11784
                     /locus_tag="QEL58_001643"
     CDS             7198..11784
                     /locus_tag="QEL58_001643"
                     /inference="COORDINATES: protein motif:HMM:NF025768.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008268398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV secretion protein Rhs"
                     /protein_id="HDS1676121.1"
                     /translation="MSIAAKHFDPQLGIDIHMYAVPPCPLPTPHIGLVLDPFDYIPFI
                     GSTIKVNGVHRGTAGTGGLDIHIPLGVWGPPLAAPMGPQFDGEEIFMGSRTVSADGEP
                     FSRLAMPVLDCNLAGMINPFRVKKPKKPLRAMSLPTGLNVAIPTSVTVGGPPTVSWTA
                     LAFRAAFAGLGKLRKSAFFRKKMDAFANWRRGKWGHLPSSFLKCKVLRAEPVDIRDGS
                     VVVNHQDFDIPGRLSFAWQRSYGSRRAGERGLCGAGWQTPADIRLELLDDGSVWLSGP
                     DQAAFFPELPPAEGEAGAILDFVDGARLLRRRGQWLVRFKSGLKYVFGGELPAGVSAL
                     PNPQSWPIERIEDAHGNHWRFERRDGHLVRIVESGIGDLQGRFIEVEARHGHIDRMAL
                     HDPATGLVHPLVSYRYSADGDLLAAVDALGAPRTFAYEQHRLVRHTDRVGLSFHYAFD
                     VQGRVVHSWGDGGLYDYHFEYDALLRETRVTDSLGHLSVVKFDENQLPLCEIDPLDGV
                     TLFEYDDFGRTVAVTDPEGLRTAFAYDAHGNLVCLTRADGTSIQMEYDPDDHMVSLRT
                     PDGVDWQQAYDSQGLLVSQTDPLGATTRFEYDPQGQLQSQTNARDAVTRLRYDRHGLV
                     AAVIDALGHGSRFEHDPLGNLLRQVDPLGQASRYEYDAKGRLLATVGPDGSGVRCEYD
                     AEDQLLRYTDEAGAQTRLQYVGIGQIGKRVQADGHSVEYRYDTEEQLVAVINQRGETY
                     QLVRDALGRIVEEVDYWGQSRRYSYDAAGRLTATLDPLGQRIAFTTDKLGRITRKTLP
                     DVRHPGQQVQEHFVYDVQGQIVELRNAARTVKRRYDPLGQLLEELQDGFRVGYAYDEV
                     GNRVLRETAAGNRVAFGYDLRDQTVSVAINDESPISMERDALGRTTREQLSPHLQREF
                     TYDSRNLLTSQSVLKDAAPLFETRYDYDRSGNLTCRSDSSQGVDEYRYDAIGRLLQHI
                     DPKGKVERYFNDPAGDRLRTEVKQVQARKVVGGDDDDLATWTREGIYQGVHYVFDRAG
                     DLVHKGAPQGDAPDDLTLIWDANHRLAESRRNGQSTYYGYDPLGRRVFKRNPTQTTWF
                     FWDGDALLGEVQQANDAEEAAPVWVGNVASLVEMRRRQRRLEKLHERVREYVYYPGTF
                     VPLAWVRPLDLERISAPISEVSGAPDPVHEAASFVAPVDPPGAIGCEVEQRTTSRSFG
                     GGLGQLGASSLGLRGSACTDKLESTTAPASAQLTRSAESRKSPSLTFPTRKAPANSAS
                     LADQSACSTARAGLFGVDPNGAVVRALDASGVHEWAVRYGSWGADENSTQGGMEFFIR
                     LQGQYRDIETGLYYNRNRYFDPLVGSFISPDPLGLDAGECIYEYSLNAIAYCDPLGLK
                     YRKTTASDGRTVYQNDDAFNPHRKVSWEDAETGEFRRGTNLDRMSEGLAPIGKDGRPV
                     QLHHLTMTEAPGMNGRRGSLAEVKASIHSKYTSILHIPFPRNPNNKRQTLPRYPSFRR
                     NNDGSASLLASQFDSFRESYWKARAQSILAGCRQ"
     gene            11794..12240
                     /locus_tag="QEL58_001644"
     CDS             11794..12240
                     /locus_tag="QEL58_001644"
                     /inference="COORDINATES: protein motif:HMM:NF025918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMI1/KNR4 family protein"
                     /protein_id="HDS1676122.1"
                     /translation="MFDNLEALVAQHPRVKVFPGRQVEPGLIREAEAELGIPLPDSYK
                     EWLLKYGNLRVGAYPVLTLAPRDVRDISDSDLIYNFRLDSRDGELSVGYISIHLPDTD
                     ESFYFDTSKGLVGGEYPIVRRDWSDGSYEPFADSFVGFLEEIVRQA"
     gene            13132..16056
                     /locus_tag="QEL58_001645"
     CDS             13132..16056
                     /locus_tag="QEL58_001645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2135 domain-containing protein"
                     /protein_id="HDS1676123.1"
                     /translation="MPLVRRVIPSVIALLLCAVAGVAQAQSTKAVRPVRSVPLLQVAG
                     AEQPIALRQARIEGDIQAGIAQTRITLEFHNPNRRVLEGEFQFPLAEGQQITGFALDI
                     GSELREAVPVPKDRGRQVFEEIARRGVDPGLLEQTAGNQFRLRIYPLPAGGSRRVQLV
                     LREPLAFSGQGWRWTLPLQFAAGAASVAVKVQAPGAMAAGTAPFQITAGQLRWQGQGA
                     QLPAQLQWTLPAERKPQVQVAPWQDGHYLLAQVPVPASGTPRTPSSEVGLLWDGSGSS
                     GQRDRVREFALLDRYFAAMGNGTVALTVLRDRAEPVRRFRIRAGNWSELRAALQAVRP
                     DGASALAQWQPQPNVKEYLLVSDGLLTYGPEQLPAMAPDQRLFAVSSAGARTDSTRLR
                     SWSEAHGGRFVALEADVDAAARALLSPPLDVQVDAGRGVQDVVIDRRSEAEGWLWLHA
                     RLAADGVPMRVRVGAGDWQALPATQKSDDGELLAGLWAQARLQQLAADRRGNREEMQR
                     LSQQFGLVGPDSSLIVLETLEDYLRYAIRPSGKLRAEYDARFARQVSDRAAADRERLD
                     EVAARWKERQQWWSRSWPKDAPPQLKGRALEVASADYAMESAPVAMLAAPAPAPAAPP
                     APMAAAAEQRREAGGARARRSVSAANQALDAVVVTGSAIDQAGPANEGELGIQLAAWQ
                     PDSAIARRLRQGPSSQLYNRYLAERDAHADSSAFFLDVADLLLEQGQRELALRVLSNL
                     AEMDLDNRHLLRVLGYRLMQADAPALAVPVFEQVLAMGQEEPQSFRDLGLALAAAGKP
                     QQALAPLYQVVVRPWDNRFDGIALIALDELTNLVSRSRPVLDTTGIDPRLLQAMPLDL
                     RVVLAWDADNSDMDLWVTDPNGERAYYGNRLTYQGGQMSQDFTGGYGPEQFSLRNARP
                     GRYKVEANYFGSRQQLVTGATTLMLRLTTHWGTPKQKDQMVTMRLKDRAETVLVGEFT
                     VE"
     gene            complement(16097..17302)
                     /locus_tag="QEL58_001646"
     CDS             complement(16097..17302)
                     /locus_tag="QEL58_001646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005413220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase family protein"
                     /protein_id="HDS1676124.1"
                     /translation="MNRRHDIDALRVFAFALLILYHTGMAYVDDWGFHLKSVHTAEWL
                     QWPMVFVNRWRMSLLFLISGIAIALMRPEGRVLRFAGLRTWRLLLPLLFGMFIIVPIQ
                     PYCEGVANGHVAPGFGAFLLRYWQVRPWPEGSFAGWQYGITWNHLWYLAYLWNYTLAL
                     ALLMPALGRPGVRRTVARVAASPTLLIGIPFVLLLAWVVWLEPIYPSTNALLGDWYQH
                     AKYATVFLAGYLFGREPVFWDRVVALRRTMLWLALAAVGWYMGLRILGQVLPADSPLR
                     QWPAPFWDLQVRTSQSLYVWTALLAILGWGKVFLDRPFRWLPYCTEAIYPWYMLHQSL
                     IIALLFWLKPLQLGAWTEPALLLGGTVGGCLLIHELLIRRVRWLRPLFGLRAEPRSLP
                     TVHAATAAS"
     gene            17478..18338
                     /locus_tag="QEL58_001647"
     CDS             17478..18338
                     /locus_tag="QEL58_001647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LytTR family transcriptional regulator
                     DNA-binding domain-containing protein"
                     /protein_id="HDS1676125.1"
                     /translation="MAQGRPPRWRTSTRILVWTAILSVSAVSNALVEVMDAGRRGADL
                     GLWEPLIWEFSSLSLILATLPLLWWGCERWPLHADTWRRRLPLYLLASVGWSLIHVVG
                     MMLVRHLAYAAVGYRYQDDAGWLERFAYEYLKDVRTFALFVALEHLASWLGRRRQGEA
                     SLLAEPDVGVPVEPVERPQHFLVRKLGKEFLVATEDVEYAQAAGNYVNLHVRGHDYPL
                     RITMAVLEQRLDPGVFLRPHRSWMINRGQLRSIEPLEGGEALLHMADGVKVPCSRRQL
                     PQLRLDLAGG"
     gene            complement(18372..19112)
                     /locus_tag="QEL58_001648"
     CDS             complement(18372..19112)
                     /locus_tag="QEL58_001648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008268683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HDS1676126.1"
                     /translation="MTIMRSTLCLAACLLAANASAIDLKGLTSTGMKAGKALTLSDAE
                     VSAAADQACTYMDKDNQVVAGNDPYAQRLAKITQGLANEDGLNLNFKVYRTADVNAWA
                     MANGCVRVYTGLMDMASDDEVRGVIGHEIGHVKLGHSKTKMRTALLASAGREGLAASG
                     NGNLTQLSQGQLGELAEGFVNAQFSQKEESAADEYGYQFMKRHSYDPAALASMFRKLS
                     SEGGLMSSHPGSEARAARIDAMIKKDKK"
     gene            19102..19374
                     /locus_tag="QEL58_001649"
     CDS             19102..19374
                     /locus_tag="QEL58_001649"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676127.1"
                     /translation="MIVIELMLLGWEWTARPPVPAAVGKSTGIVQARVQARDRRVRAA
                     SPRAGWLRYHSQSSFECMTADMIELNPVRQRITDLTDRVLSLRGYL"
     gene            19297..20422
                     /gene="prfB"
                     /locus_tag="QEL58_001650"
     CDS             join(19297..19371,19373..20422)
                     /gene="prfB"
                     /locus_tag="QEL58_001650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037064.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 2"
                     /protein_id="HDS1676128.1"
                     /translation="MIELNPVRQRITDLTDRVLSLRGYLDYDAKKERLEEVTRELESP
                     DVWNNAEYAQNLGRERSSLEKTVGGIASVLDGLTDATELLELAESEQDEDTALAVVAD
                     LDKHQAHVEKLEFQRMFSGEMDNAAAFVDIQAGAGGTEAQDWAEILLRMYLRWCESRG
                     WKTELMEVSGGDVAGIKSATLRVEGDYAYGWLKTETGVHRLVRKSPFDSDNRRHTSFT
                     SVFVSPEIDDNIDITINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNIVVACQT
                     GRSQHQNRDNAMKMLAAKLYELEIQKRNAEKDAVEATKSDIGWGSQIRNYVLDQSRIK
                     DLRTGIERSDTQKVLDGDLDEFVEASLKAGLAVGSKRVDA"
     gene            20468..21250
                     /locus_tag="QEL58_001651"
     CDS             20468..21250
                     /locus_tag="QEL58_001651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005416384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDS1676129.1"
                     /translation="MMRSESERKELGGFLKACRARVDPTTLGLPAGRRRTPGLKREEV
                     ALAIGVSVSWYTWIEQGREVRASPEVLERLAEVLRMSDDERAYAFALSGYGVPLESPD
                     ESVTDGLRQLVEAMQPIPAYVRNTRFDILAWNPAIAELFVDYSQLAPHERNTLRLMFL
                     YPPYRTLILNWEEMTRGLLAGFRAAMAQAPDKAPFLALVEDIAAHSEEFRQWWPEHDV
                     RRFDEGAKKLNHPTRGLLDLQYVALVPESRHDLSLVTYLPRK"
BASE COUNT         3656 a         6694 c         7319 g         3586 t
ORIGIN      
        1 ggcgcaatcc cgccagcctc tcccacgcgc ggtatcatcc ctctgtcttt cgtaaccggc
       61 gatgccgatg tcccttgccg ccgatgctgt gcagccatcc actgatacgg tgacgatccg
      121 ccgtcgcgat gcggtcgcac ccggcaactg gccggacggc acactgccgc tgctggtgcg
      181 gctctacgcc agtcgcgatg ccggtacccc ggagctggcg ctgccgaagc tgggcaatct
      241 gcatgcgccc gaactgctga ccggcatcga tgcagcggtg ggcctgctgg tcgaggccat
      301 cgccaatgac aagcgcatcc tggtggtcgg cgatttcgat tgtgatggcg ctaccgcctg
      361 cgcggtgggc gtgcgcggcc tgcgcatgct cggcgcgcag catgtcttcc acgcggtgcc
      421 gaaccgcatg gtgcacggct atggcctgtc gccgtcgctg gtggacgaac tggccgcgct
      481 gcagccggac ctgctggtta cggtcgacca cggcattgcc tgccatgcgg gcgtgactgc
      541 ggccaaggcg cgtggctggc aggtgctggt caccgaccat cacctgccgg gcccgcagct
      601 gccgccggct gatgtcatcg tcgatccgaa cctggatggc gatgccttcc ccagcaaatc
      661 gctggccggt gtcggcgtga tcttctacgt tctgatggcg ttgcgccggc agatgcgcga
      721 ggccggtgtc ttcgccgatg gcaaggggcc ggacctgacc acgctgctgg acctggtggc
      781 ggtgggcacc gtcgccgacc tggtggcgct ggacccgaac aatcgtgcac tggtcagcgc
      841 gggcctgcgc cggctgcgtg ccgggcaggg ctgtgtcggc ctgcgcgccc tgatcgaagc
      901 cagtggccgc gatgccgcac gactgaccgc caccgatatc ggcttcgcac ttgggccgcg
      961 cctgaacgct gccggccggc tggaagacat ggcgctgggc atcgcgctgc tgctgaccga
     1021 ggacccacgg caggcacgcg acattgcgca gacacttgag cagatcaatt cggaacggcg
     1081 cgcggtgcag cagtcgatga ccgacgatgc cgagcaggcg ctgacccgcg tggtgctgga
     1141 catggccggc cagcggccgg tggcggcttg cctgttcgat gccgactggc acccgggagt
     1201 cgtgggcctg gtcgcgtcga agatgaagga ccgcctgcat cgcccggtga tcgccttcgc
     1261 cccggctgag ccgggggccg acacgctgcg tggctcggcg cgctcgattc ccggcctgca
     1321 catccgtgac gcgctggcgc tggtcgacgc acgccatcct ggcctgatcg aacgtttcgg
     1381 tgggcatgcg atggccgccg gcctcagcct gcgcctggat cacgttgacg acttcaaggc
     1441 cgccttcatc gccgtggtgc tggaaatgct cgacccggcg gccctgcagc agcaggtatt
     1501 gagcgacggc gaactggcgg cggacgagct cgaccatcgc catgccgtcg cgctgcgcct
     1561 ggccgggccg tggggtcagg gcttcccgga accgctgttc gacggccatt tcgaagtggc
     1621 caactggcgc gtgctgaagg agcgccacct gaagctggaa ctgcgcctgc cgggcgtgcc
     1681 cggcacgatc aacgccatcc acttcggcgg ctggcacggc aatgcgccgg gccgccatgt
     1741 gcatctcgcc tatcgcctgg cctgcgatga ctaccgtggt ggcagcgcga tccagctgat
     1801 cgtcgagcac tgcctgcccg gctgaaaaaa gggacggagg ggattaagtc gcttgtgcct
     1861 tgtttgccaa ttgcgactta atcccctccg tccccttttt ccacttcggt caccagggtc
     1921 ggcagttccc aggtgccacc gggcacgccg cagcacaggc ctgctgcgat ttcggaggtc
     1981 gcgacgaagg ccgtgccagt ccaggtccag gtgctctgcg agatgcagtc gcccagtccg
     2041 cggcccttct gcgcggcgat gatctgccca tcgtcatagt cgatcgcatc actggtcacc
     2101 cattgcggtt ggaacggggc cttcgggcgg gccacccagt agccgtcgcc ggtgttgtag
     2161 gccgcgcgcc agcagggcac gttgaccagc acgtgctgcg cgtccaggcg acgtatctcc
     2221 agtgccgagt tgctcagcgg gatatcggca tcggcctcca gcaggccctc gcagctgttg
     2281 tccttcagcg tggcacgcag cgccgcgcgc agcgcgggcg aggcggccag ctgcgcgaag
     2341 gccgggtcat ccggaatcga atcggcagtc ggtgcgctgt gcaccatggg caccggcagc
     2401 ggggccggaa cgctggcttc gggcgtgctg cccttgcgca tcacggcacc gggcgtgccg
     2461 aggcggccct ggtactcgtc gatcttcagc aggactgcgg cggcgccctt gtccgacaac
     2521 gcccaacgtt gaccggtggc atcgctcacg ctgattccac cgtcgcgcac cagtgcggac
     2581 aacagtgcgg cggtctgcgc ggcactcagg gtataggtgc cttcgccctg gtccgctacc
     2641 agcacaccca ggtcctgctg ccggacatgc aggcgcagca caccggcggg ccgggcctgg
     2701 ccttcatccg gctgcagcga aagacggccc tgcatggcct ggttggcgcc gcccttgcgg
     2761 gtcagcagca cgctgagcgt gctctgctcg tcggcggcgt agccggcggc gcggcaggtg
     2821 cgggtgttgt cacaggccac cacccagtcg tggtgctgga agtacagccg gctggagggt
     2881 gccccggcgt tcgcagcggg cggggtgacc aaggccagca gggcaatggg caggaactga
     2941 cgcatgggca tccatacaca tgggcggggc cacagagtgc ccagccagga ccgtcagcgc
     3001 cagcctgaat ggctgcgctg tgctctccgt atttgtgacg cggttcgcgc tgtcgtgaaa
     3061 atccttaatg aattcatctc cttatccagc gctgattgcg tcaaaaagct ggcacatggc
     3121 acaggtcaat ggcaaagtcg ggccacgacc aacatgggac gacggaacgc ccgatgtacg
     3181 ccgaatcact gcttcccggc gccacgctgc agcgcctgca ccaggaccga cgcctgatcc
     3241 gtgtcgaaac cgctttggat ccggacacgt tcctggtcaa gcgcttcgac ggggctgaat
     3301 cggtgtccgc gccgtttgcg taccgcattg atctgctctc gatccagccg cgactggagc
     3361 tgaaacagct ggtcgggcaa ccgctgcggc tgcagctcgg cgatgagttc ggcaaccgca
     3421 gcgtgcatgg ctacgtgcgc gagttcgcca gcagcgggca gcaggcgcag ttcagcgcct
     3481 atcgtgccga gctggcgccg tggttcgcct tcctcgacta cacctgcaac tgccgcattt
     3541 tccaggaccg gaacgtgctg cagatcatcg aggaagtctt cgagggctat gcgcagctgg
     3601 ccaggttccg ctacgacctc aatgccggca agctggcgcc gctgccgtat tgcgtgcagt
     3661 acaacgaatc ggacttcgcc ttcgtcagcc gcctgctgga agatgccggc ctgtactaca
     3721 gcttcgtcca cgacgaagaa ggccatgaga tggtgatcag cgacgattcg acgctgagca
     3781 ctgcccatgg cgagccgcag ccgatcgcgt ttgtttccga ccagggcacc ctggccagca
     3841 cgggcctgca tcgctggggg gcgcggcgcc gggtcgggcc gagcgtgcag acgctgcgca
     3901 gcttcgactt caagcagccg ggcgaacggc tggatggcaa ccagggcaac caggtgccgc
     3961 tgggcctgct gccgccgttg gagcagtacc gctacgacgg tgccgcgcgc ttcatgaaca
     4021 gccgcatcgg tacggcgctg gccgcggtgc gcaacgagga agtgacctgg ccgaccaagc
     4081 tgttcgagtg tgcgggcaat gccggcgaga tggaggccgg cggctgcttt gatctggaac
     4141 ggcatccgga cttcatcggc cgtgacgaca ccgatcgcag cttcttcgtg gtcagcatgc
     4201 aacgcgaagg ccacaataat tttgccgccg atttcggcag tgcagaagcg cccagcgtgg
     4261 aagtgcaggc cgaagtgctg cggcggcaca tcccgtaccg cccgctgcgg ctcaccccgt
     4321 ggccgcgcat gcccggcccg cagaccgcca ccgtggtcgg cccgccgggc gaggaactgc
     4381 acgccgaccg ctatggccgc gtgaaggtgc agttccattg ggaccgccaa ctggaccgtc
     4441 gcgagaacgc ctcgtgctgg atccgcagtg ccagcccctg ggccggcgcg gacatgggcg
     4501 gcgtgtcgcc gccgcgcgtg ggccaggaag tgatcgtcga cttcctcgac ggtgatccgg
     4561 accggccgat catcaccggc cgcgtctaca acgaagacaa catgccgccg ttcggcatgg
     4621 aggtcagcgg cctgaagtcg aagacggtca agggcgcggg ctggaatgaa atcaccatgc
     4681 acgatggcgc cggcggcgag ctgctgaaca tgcgcgccca gcgtgacatg gtcaccaccg
     4741 tgctcaacga ccagaacgcc agcatcaata acaacaaatc gaccacggtg gcggtgaacc
     4801 acacgatggg cgtgggcgcc aaccaggaca tcagtgtcgg cggcaaccgc ggcatcactg
     4861 tgaccggcac cgatatgctc ggcgtcaccg gcacccgtac caccaatgtc accggtgcgg
     4921 tcaccgagaa gtacgagacc ggcgaaacca agacgattgc cgccgccggc tataccgaaa
     4981 ccatcaccgg tgatttcaag accacgctga ccggcaacta caccagccag cgcaccggca
     5041 cctggaccga gaccgtcacc tccacctcca gccgcaccgt cggtgggctg gtcaccgaga
     5101 ccctgcaggc cgcgcgtgaa gtgacgatca ccgggcagga caagcgcaag gtgcagggca
     5161 aggtcgacga cagcaacgtc ggcgagcgcg tcatcgatgt caccggcaat ttcagccagg
     5221 atgccagtgg cacccacagc cagggctcgg acggcgcaat gagcctggag tcggcggtca
     5281 agctcaccag caaggtcggc ggatcggtca tcgagatcac cgacagcgcg atcaagatca
     5341 ccgccggcgg ttcggaagtg gtgattgatg ccggtggtgt atcggtcaac ggcagcgaga
     5401 tcaagctcaa ctgctgagcc gcaagggaga agtacgatgc aggacacccc catgctgcgc
     5461 ggcctgaacg cactgcgcga tgcctggctg gaggccagcg ccgacggcag ccggcgcctg
     5521 ctggtctggc gcctgcctgc ggcggcgagc cgtttgctgg ccgcattctt cgaaatgcag
     5581 cgcaacgatg ccggacgcga tacgccggac tacttcctgc gcatcgatac cgcctacgaa
     5641 ctgggcttcc gctacagccg gcagctcaag caggacctgc tggagcgcta tgtcgccagc
     5701 caagaggatc tgcgcgccca gcaggtgccg ctcggctggc gtggcccgca cgaaggccat
     5761 ccggacagcg cacagggtgt ggtcgaggtg ctggagagtt tcatcgatca ccacggcgaa
     5821 catctgcgcc tgctggcggc ggtgctggag ccggagcgca gcgtgcccgg cgaaggtttc
     5881 gagcgctggg tggatgccgc gctggccgcc ggccctggcc cgcgcctgcg cctggtgctg
     5941 gtggataccg aggaggatcc gcgctggcag tcgttgctgg aacggcacgg caggatcgcg
     6001 cgcgtggtca gtgcgccggt cgacatgttc ggcatcgccc gcgataccgc cgcacagtct
     6061 ggcggccgcg gcccggaagt gctgtaccgg cagctgctgg ccgacctgat gctgctgctc
     6121 gaacgcggca gcccctcgca ggtggtggcc cgcgctgagc gcgcacaggg gctggcgcag
     6181 cgccatggct ggcaggacca gcaatcggtg gtgcagatga tggtcgctgg tgcgtggttg
     6241 aagcacggcg accacgggca ggccatcaac agctaccggc aggcgcgcag tgcggccgag
     6301 ggcgcgcgca tgagcggcaa ccctgctgca ccggaactgg tgatgcagag ctggtttggc
     6361 gaggcaggct gctggctggc ggccaagcag ccggagcgcg ccgcgcagac ctatctgcag
     6421 gcctcgacgt cggcagcgag cattccgcac ccgatgttcg cgctggaagg ccagcgcatg
     6481 gccggctggt gccagctgca ggccggacag cgcgaagcgg cgcggaccca gttgctggag
     6541 gcgatccgca tcgccaagcc gctggcgccg gccgaccgca aggccactac gctgccacag
     6601 gcactgtggg acctgctgca actgcaggat gcgcgccgct gcgaatcgct gcagcaggtg
     6661 gccgccgact acctgcaggc cagcaccggc ctgctggaga aggccgacgc gcaggggcat
     6721 gcgctgggcc cgcggccggt gcggccggca ctggatgccg tcgacgcgga gctggatgcc
     6781 gcgctggaac gtggcttcca ccgcgcccag caggagcgcg agcggctgat ccagggcggc
     6841 gacgaattct tccgcaagat cgtggccgtc ggccgcgact tcctcgaccc gggctggaac
     6901 ggcctgccgg ccatcgaaca cccgctcgat cacgagatac cggtgtggag cgagccgccg
     6961 gcgatgcagc cgttgcccga ccccagtggc ctgctgcagg cgtccgtggc ggcgccggcc
     7021 gggcctgccg ttacaggagt ggctgttgca tgaagtcgaa caagaccgtg gtgatgctgg
     7081 tggccatcgt gctgggcatc atcgtcgtga cctggatcag cgccgagtac cgtgacgaag
     7141 taaaggcgtt cctgcgcgcg ttgttccgcg ccttgtaaag caacagggag tgttgccgtg
     7201 agcatcgccg ccaagcattt cgatccgcag ctgggcatcg acatccacat gtacgcggtg
     7261 ccaccgtgcc cgctgccgac gccgcacatc ggcctggtgc tggatccgtt cgattacatc
     7321 ccgttcatcg gctcgaccat caaggtcaac ggcgttcacc gcggcaccgc cgggaccggc
     7381 ggcctggaca tccacattcc gctgggggtg tggggcccgc cgctggcggc gccgatgggg
     7441 ccgcagttcg acggcgaaga aatcttcatg ggcagccgca cggtgtcggc cgacggcgaa
     7501 ccgttctcgc ggctggcgat gccggtgctg gactgcaacc tggccgggat gatcaatccg
     7561 ttccgggtga agaagccgaa gaagccgctg cgcgcgatgt cgctgccgac cggcttgaac
     7621 gtggccattc ccaccagcgt caccgtcggc ggtccgccga cggtgtcatg gaccgcgctg
     7681 gcgttccgcg ccgcattcgc cgggctgggc aagttgcgca agagtgcttt cttccgcaag
     7741 aagatggatg cgttcgccaa ctggcggcgc ggcaagtggg gccatctgcc ctccagcttc
     7801 ctgaaatgca aggtgctgcg tgccgagccg gtggatatcc gcgatggcag cgtggtggtc
     7861 aaccaccagg acttcgacat tccggggcgg ctttcctttg cctggcagcg cagctacggc
     7921 tcgcgccgcg cgggcgaacg cggcctgtgc ggcgcgggct ggcagacgcc ggccgacatc
     7981 cgcctggaac tgctggacga cggcagcgtg tggttgtccg gcccggacca ggctgcgttc
     8041 ttccctgagt tgccgcccgc tgaaggcgag gccggggcca tcctcgattt cgttgatggc
     8101 gcgcgcctgc tgcgtcggcg cgggcagtgg ctggtgcgct tcaagagcgg cctgaagtac
     8161 gtgtttggcg gcgaactgcc ggcaggcgtg agcgcactgc cgaatccaca atcctggccg
     8221 atcgagcgca tcgaggacgc gcacggcaac cactggcggt tcgagcgtcg cgatggccac
     8281 ctggtgcgca tcgtcgaaag cggcatcggc gacctgcagg gccgtttcat cgaagtggag
     8341 gcgcgccacg gtcacatcga tcgcatggcg ctgcatgacc cggccaccgg cctggtgcat
     8401 ccgctggtga gctatcgcta cagcgccgac ggcgatctgc tggcggcggt ggacgcgctt
     8461 ggagcgccgc gcaccttcgc ctacgaacag caccgcttgg tgcggcacac cgaccgcgtt
     8521 ggcctgtcat tccattacgc gttcgacgtg cagggcaggg tggtgcattc gtggggcgac
     8581 ggtggcctgt acgactacca cttcgagtac gacgcgctgc tgcgcgagac ccgggtgacc
     8641 gactcgctcg gccatctgag cgtggtcaag ttcgacgaga accagctgcc gctgtgcgag
     8701 atcgatccgc tcgatggcgt gacgctgttc gagtacgacg atttcgggcg gaccgtggcg
     8761 gtgaccgacc cggaagggct acgcacggcg tttgcctatg atgcgcatgg caacctggtc
     8821 tgcctgaccc gcgccgatgg cacgtcgatc cagatggagt atgacccgga cgaccatatg
     8881 gtgtcgctgc gcacgccgga tggcgtcgac tggcagcagg catacgatag ccaaggcctg
     8941 ctggtcagcc agaccgatcc attgggtgca accacccgct tcgagtacga ccctcaaggc
     9001 cagttgcagt cgcagaccaa cgcgcgcgat gcggtcacac gcctacgcta tgaccgtcac
     9061 gggctggtgg ctgccgtcat tgatgcgctc ggccatggga gccgcttcga gcacgatccg
     9121 ctgggtaacc tgctgcgcca ggtggatccg ttggggcagg ccagtcgcta cgagtacgac
     9181 gccaaggggc ggctgttggc cactgttggt ccggacggca gcggtgtgcg ctgcgaatac
     9241 gatgccgaag accaactgct gcgctatacc gatgaagcag gcgcgcagac gcggctgcag
     9301 tacgtgggca tcggccagat cggcaagcgc gtgcaggccg atggccacag cgtggagtac
     9361 cgctacgaca ccgaagagca gctggttgcg gtcatcaacc agcgcggcga aacctaccag
     9421 ctggtgcgcg atgcgctggg ccgcatcgtc gaggaagtgg actactgggg gcaatcacgg
     9481 cgttacagct acgatgctgc cgggcgactg acggcgaccc tggatccgct gggccagcgc
     9541 atcgccttta ccaccgacaa gcttgggcgc atcacccgca agacgctgcc ggatgtgcgc
     9601 catcctggtc agcaggtaca ggaacacttc gtctacgacg tgcagggaca gattgtcgag
     9661 ctgcgcaatg cggcgcgtac ggtgaagcgc cggtacgacc cgctggggca attgctggag
     9721 gaactgcagg acgggttccg ggtgggctac gcctatgatg aagtgggcaa ccgcgtgctg
     9781 cgcgagaccg ctgccggcaa tcgggtggcg ttcggctacg acctgcgcga ccagaccgta
     9841 tcggtggcca tcaacgacga atcgccgatc tcgatggagc gcgacgcgct gggccgcacc
     9901 acgcgcgagc agctgagccc gcacttacag cgcgagttca cctacgacag ccgtaacctg
     9961 ctgacctcgc agtcggtact gaaggacgct gcgccgctgt tcgagactcg ctacgactat
    10021 gaccgcagtg gcaacctgac ctgccgcagc gacagctcgc aaggcgtgga cgagtaccgc
    10081 tacgacgcta tcgggcgcct gctgcagcac atcgacccga agggcaaggt cgagcgctac
    10141 ttcaacgatc ccgccggtga tcggctgcgc accgaagtga aacaggtcca ggcgcgcaag
    10201 gtagtgggcg gtgacgatga cgacctggcc acctggacgc gcgaaggcat ctatcagggc
    10261 gtgcactacg tgttcgaccg ggcgggtgat cttgtgcaca agggcgcacc gcaaggagat
    10321 gcgcctgatg acctgacgtt gatttgggat gccaaccatc ggttggcgga gagccgccgc
    10381 aacgggcaat caacgtacta cggctatgac ccgctgggac gtcgggtttt caagcgcaac
    10441 ccgacgcaga caacgtggtt cttctgggat ggcgatgcgt tgctgggtga ggtgcagcag
    10501 gccaacgacg ccgaagaggc ggcgccggtg tgggtcggta atgtggccag cctggtggag
    10561 atgaggcggc ggcagcggcg gttggaaaag ctgcatgagc gggtgcggga gtatgtctac
    10621 taccccggga cgtttgtgcc gttggcctgg gtcagacctc tcgatctaga gaggatatct
    10681 gctccaattt cagaggtatc aggagccccc gatcctgtgc acgaggccgc atcgtttgtc
    10741 gcccctgttg atccgccagg tgcaatcggg tgtgaggtag agcaaaggac aacgtctcgc
    10801 tcgtttggtg gtggacttgg ccagttgggt gcatcttcct tgggactcag gggatctgcg
    10861 tgtaccgaca agcttgaatc gactactgct ccggcatccg cgcagctcac tcgttcggca
    10921 gagagcagga aaagccccag tttgaccttc ccgaccagaa aagcaccggc taactccgcg
    10981 tcgctggcgg atcagtccgc atgcagtact gctcgggcgg gcctatttgg ggtggatccg
    11041 aatggtgcgg tagttagagc gctggatgcg tcaggagtac atgagtgggc ggtcagatac
    11101 gggtcatggg gggctgatga gaacagcacc cagggcggga tggagttctt catacgtctg
    11161 caagggcagt atcgggacat tgagacaggt ctctattaca atagaaatcg atactttgat
    11221 ccgttggtcg gaagcttcat atctccggat ccgctcggtc tcgatgcagg agagtgcata
    11281 tacgaatatt ctctaaacgc aattgcgtac tgcgacccgt tgggtctgaa gtaccggaag
    11341 actacggcga gtgatggtag aaccgtttat cagaatgatg atgcattcaa tcctcataga
    11401 aaggtgtcgt gggaagatgc agagacgggt gagttcaggc ggggtacgaa tcttgaccga
    11461 atgtcggagg gcttggcgcc gatcggaaaa gatgggcggc cagttcagtt gcaccatctg
    11521 accatgaccg aggcgcccgg gatgaatggg cggagaggtt ccttggctga ggtgaaggca
    11581 tccatccatt cgaagtacac atcgattctc catattcctt tcccgaggaa tccaaacaac
    11641 aagaggcaga ccctgcctcg atatccgagt tttagaagaa ataacgatgg aagcgcgtcc
    11701 ctgctggcaa gtcaattcga cagcttcagg gagtcatatt ggaaggcgag agcgcaatca
    11761 atacttgctg gctgccgaca atgaggtgtg ttcatgtttg ataatctgga ggcgctggtg
    11821 gcgcagcacc cgcgagtcaa ggtatttcct gggcgccagg ttgaacctgg ccttatccgg
    11881 gaggccgaag ctgagctggg gattccattg cctgattcgt acaaggagtg gttgctcaag
    11941 tatgggaatc tgagggtcgg cgcttatcct gttctgaccc ttgcgcctcg ggatgtgcgt
    12001 gacatttccg atagtgatct gatctacaat ttcaggttgg attcccgtga tggcgagctg
    12061 tcggtcgggt atatctcaat tcatctgccg gatacggatg aatcattcta tttcgatacc
    12121 agcaaggggc tggttggcgg agagtatccc attgtcaggc gggattggtc tgacggatcg
    12181 tatgagccgt ttgccgacag ttttgtgggt tttctagagg agattgtccg gcaggcttga
    12241 tgtgacctga ttagcacgaa ctttcagcac ggattaggct aaacttccaa gcgcaatacc
    12301 cccatgtcct gatgttgcca tgtcaacgac aagaacctat caccacctca gtgcagaaaa
    12361 acgtgctgtg atcatgatca agcgccagta tgcgcagcat cgtccgatgt cttgggcgct
    12421 cgtcggcgac catcagccgt gagttacgcc gcctgtagat atcggcctac gacgcgacta
    12481 cggctggtca caggtatcgg cgccgacgtg aacgatgctg gcgcaggcgt ctgctggcag
    12541 agggcactgc gctgcatcgg cacgttcatg atcacttggt gctcctgcgc tggtcgcaac
    12601 tcgttcgtca ctcagggtaa agaggctctt gccttctagt tcctggcctt gctctgcctg
    12661 atatggagtg gctgtagcgc tgtggtcata cgccccaggg tgacgtggta gctccgtcga
    12721 ctacctctcg cgttgcgcaa ttcggtgctg atattgaagc gccgctatga gcgtgtattc
    12781 attcacatca tgtgtggtgt cttcgttggt ctctatggtg gacttggaag tgcgttccct
    12841 gagacgcaca cgagactagg catcttcggt gagtcgattg ctgaggaggc gttgctcgtg
    12901 gtgcctttgg ccgccccaag gaagcgacgt gaagactggg caggtgggat cgcagagttg
    12961 aggcgtttgg gtattgtctc gggttaggcg agtttccgct catgctcagc gctcctccca
    13021 ttggattgta aacagtcttg ggtgagtgcc tgtttcgacg gcatctcccc atccaacccc
    13081 atttgcccca gccacgcgtt gaaccgtcca acctcccgct ggagcagtcc gatgcccctc
    13141 gtccgccgcg tgattccatc cgtaatagcc ctgctgctct gcgctgtcgc cggggttgcc
    13201 caggcgcagt ccaccaaggc cgtccggccc gtccggtcgg tgccgctact gcaggttgcc
    13261 ggcgccgagc agcccatcgc gctgcgccag gcccgcatcg agggcgacat ccaggccggc
    13321 atcgcccaga cccgcatcac cctggaattc cataacccga accggcgcgt gctggaaggg
    13381 gagtttcagt tcccgttggc cgagggccag cagatcaccg gatttgccct ggatatcggc
    13441 agcgaactgc gcgaggcggt gccggtgccc aaggaccgcg gccgccaggt cttcgaggag
    13501 atcgcccgcc gtggcgtcga ccccggcctg ctggagcaga cggcgggcaa ccagttccgc
    13561 ctgcgcatct acccgttgcc ggccggtggc agtcgccgcg tgcagctggt gctgcgcgag
    13621 ccgctggcct tctcgggcca gggctggcga tggacgctgc cgctgcagtt cgccgcaggt
    13681 gccgcctccg ttgcagtgaa ggtgcaggcg cccggggcga tggccgcagg taccgcaccg
    13741 ttccagatca cggcgggcca gctgcgatgg cagggccagg gtgcgcagct gccggcacag
    13801 ctgcaatgga cgctgccggc tgaacgcaag ccgcaggtgc aggtggcgcc gtggcaggac
    13861 ggccactatc tgctggcgca ggtgccggtg ccggccagcg gtactccccg cacaccgtcg
    13921 agcgaggtcg gcctgctgtg ggacggatcg ggttcctccg gccagcgcga ccgcgtgcgt
    13981 gagttcgcgc tgctggatcg ctacttcgcc gcgatgggca atggcacggt cgcgctgacc
    14041 gtgctgcgcg accgtgccga gccggtgcgc cgcttccgta tccgcgcagg caactggagc
    14101 gagctgcgcg cggctttgca ggcggtgcgc ccggacggtg ccagtgcgct ggcccagtgg
    14161 cagccgcagc cgaacgtgaa ggagtacctg ctggtcagcg atggcctgct gacctacggg
    14221 ccggagcagc tgccagcgat ggcgccggat cagcgcctgt tcgcggtcag cagcgccggt
    14281 gcccgcaccg acagcacgcg cctgcgcagc tggagcgaag cgcatggcgg ccgcttcgtc
    14341 gccctggaag ccgacgtcga tgctgccgcg cgcgcactgc tgtccccgcc gctggatgta
    14401 caggtcgacg cggggcgtgg tgtgcaggac gtggtgattg atcgtcgcag cgaagccgaa
    14461 ggctggctgt ggctgcatgc ccggctggcg gctgacggtg tgccgatgcg ggtccgtgtc
    14521 ggtgccggtg attggcaggc attgccagca acacagaaaa gcgatgatgg tgaattgctt
    14581 gcggggctgt gggcacaggc acgcctgcaa cagctggccg ccgatcgtcg cggaaatcgc
    14641 gaggaaatgc agcgcctgtc gcagcagttc ggcctggtcg ggccggattc ctcgctgatc
    14701 gtgctggaaa cgctggagga ctacctgcgc tatgcgatcc gtccgtccgg aaagctgcgc
    14761 gccgagtatg acgcccgctt cgcgcggcag gtgagcgacc gtgccgctgc cgatcgcgag
    14821 cgtctggacg aggttgctgc gcgttggaag gagcgccagc aatggtggag ccgcagctgg
    14881 ccgaaggatg cgccgccgca gttgaagggc agggcactgg aagtggcgtc cgcggattac
    14941 gcgatggaat cggcgccggt ggcgatgttg gctgcgccgg cgcctgcgcc ggcggccccg
    15001 cctgcaccga tggcggccgc ggccgagcag cgcagagagg caggcggcgc gcgcgcgcgt
    15061 cgctccgtgt ccgcggcgaa ccaggcgctc gacgcggtgg tggtcaccgg ttcggccatc
    15121 gatcaagcgg ggcccgccaa cgagggcgag ctcggcatcc agctggccgc atggcagccg
    15181 gattcagcca ttgcccgccg cctgcgccag gggccgtcct cgcagctgta caaccgctac
    15241 ctggccgagc gcgatgcgca tgccgacagc agcgcgttct tcctcgatgt ggccgatctg
    15301 ctgctggaac agggccagcg cgagctggcg ctgcgcgtgc tgtcgaacct ggccgagatg
    15361 gacctggaca accgccacct gctgcgtgtg ctcggctatc ggttgatgca ggccgacgcc
    15421 ccggcactgg cggtgccggt gttcgaacag gtgctggcga tgggccagga agaaccgcag
    15481 agtttccgtg acctcggcct ggcgctggcc gccgccggca agccgcagca ggcgctggcg
    15541 ccgctgtatc aggtggtggt gcggccgtgg gacaaccgct tcgatggtat tgcgctgatc
    15601 gcgctggatg aattgaccaa cctggtatca cgcagccgcc cggtgctgga caccacgggc
    15661 atcgacccgc gcctgctgca ggcgatgccg ctggacctgc gcgtggtgct ggcctgggat
    15721 gccgacaaca gcgacatgga cctgtgggtg accgacccga acggcgagcg cgcgtactat
    15781 ggcaaccgcc tgacctacca gggcgggcag atgtcgcagg acttcaccgg tggctacggc
    15841 ccggagcagt tctcgctgcg caacgccagg cccggcaggt acaaggtgga ggcgaactac
    15901 ttcggcagcc gccagcagct ggtgaccggt gcgaccaccc tgatgctgcg cctgaccacg
    15961 cactggggca cgccgaagca gaaggaccag atggtcacga tgcggctgaa ggaccgcgcc
    16021 gagaccgtgc tggtgggtga gttcacggtg gaatgagtca cccagggtcg atgcggagcc
    16081 gagcaggggc tcggctctat gaggccgccg tcgcggcgtg tacggtcggc aatgatcgtg
    16141 gctcggcacg caggccgaac agcggccgca gccagcgcac gcgacggatc agcagctcgt
    16201 ggatcagcag gcagccgccc acggtgccgc cgagcagcag cgccggctcg gtccacgcgc
    16261 caagctgcag cggcttgagc cagaacaaca gcgcgatgat caggctctgg tgcagcatgt
    16321 accagggata gatcgcctcg gtgcagtacg gcagccagcg gaacgggcgg tcgagaaaga
    16381 ccttgcccca gccgaggatg gccagcagcg cggtccagac gtacagcgac tggctggtcc
    16441 ggacctgcag gtcccagaaa ggagcgggcc actgacgcag cggcgagtcg gccggcagca
    16501 cctggccgag gatgcgcagg cccatgtacc agccgactgc ggcaagcgcc agccacagca
    16561 tggtgcggcg cagggcgacc actcgatccc agaacacggg ctcgcggcca aacaggtagc
    16621 cggcgaggaa caccgtcgcg tacttcgcgt gctggtacca gtcgccgagc agggcattgg
    16681 tggacgggta gatcggctcc agccagacca cccaggccag cagcagcacg aacggaatgc
    16741 cgatcagcag cgtgggcgat gcggcaacac gggccacggt cctgcgcacc ccgggcctgc
    16801 ccagcgccgg catcagcagg gccagcgcca gtgtgtagtt ccacaggtag gccaggtacc
    16861 acaggtggtt ccaggtgatg ccgtactgcc agccggcaaa actgccttcc ggccacggcc
    16921 gcacctgcca gtagcgcagc aggaaggcgc cgaagcccgg tgcgacatgg ccgttggcca
    16981 caccttcgca gtagggttgg atcggcacga tgatgaacat gccgaacagc agcggcagca
    17041 gcagccgcca cgtgcgcagg cctgcaaagc gcagcaccct gccttccggc cgcatcaacg
    17101 cgatggcgat gcccgagatc aggaacagca gcgacatccg ccagcggttg acgaacacca
    17161 tcggccactg cagccattcg gcggtatgta cgctcttgag gtggaagccc cagtcgtcca
    17221 cgtaggccat gccggtgtgg tagaggatca acagggcgaa ggcgaacacc cgcagggcgt
    17281 cgatgtcgtg gcgtcggttc atgggcaggc cgggcaggga ggtcaggcca cggtgagcgc
    17341 cgccacgcgc cgtgaccatg gcgctgggcc cgccggtacc gcccaggtga ccaatggcgg
    17401 gcggcggggg accagtggag ccgctaccct cggccccttg aggcacgctg gagcaccgca
    17461 acgagatgga tgcagcaatg gcacaggggc gcccgccgcg ctggcgtacg tcaacccgca
    17521 ttctggtatg gaccgcgatc ctgtcagttt cagcggtgag caatgcgctg gtggaggtga
    17581 tggacgcagg gcgccggggc gcggatctgg gcctgtggga gccactgatc tgggagttca
    17641 gcagcctgag cctgatcctg gcgaccctgc cgctgctgtg gtgggggtgc gagcgctggc
    17701 ccctgcatgc cgatacctgg cgccggcggt tgccgctgta cctgctggcc agcgtgggct
    17761 ggtcgctgat tcacgtggtg ggaatgatgc tggtccggca cctggcctac gcggcagtgg
    17821 gctatcgcta ccaggacgat gccggctggc tggagcgctt tgcctacgaa tacctgaagg
    17881 atgtgcgtac gtttgcgctg ttcgtggcgc tggagcacct ggccagctgg cttgggcggc
    17941 ggcgccaggg cgaggcgagc ctgctggccg agcctgacgt tggcgtcccg gtggagccgg
    18001 tcgagcgccc gcagcacttc ctggtgcgca agctgggcaa ggagttcctg gtcgccaccg
    18061 aagacgtgga atatgcccag gcggcaggca actacgtgaa cctccacgtg cgtggccatg
    18121 actatccgct gcggatcacc atggccgtgc tggagcagcg gctggacccg ggcgtgtttc
    18181 tacgcccgca tcgcagctgg atgatcaatc gcggccagtt gcgctcgatc gagccactgg
    18241 agggcggcga ggcgctgctc cacatggccg atggcgtcaa ggtgccgtgc agtagacgac
    18301 agctgcccca actccggctc gacctggcgg gcgggtgagc gggcgggcca tgcggcccgc
    18361 ccgcagacaa cttacttctt gtccttcttg atcatcgcgt cgatgcgcgc agcgcgggct
    18421 tccgagcccg ggtgcgagga catcaggccg ccttcgctgg acagcttgcg gaacatgctg
    18481 gccagggccg ccgggtcgta gctgtggcgt ttcatgaact ggtagccgta ctcgtccgcc
    18541 gcgctctctt ccttctgcga gaactgcgcg ttgacgaagc cttcggccag ttcgcccagc
    18601 tggccctggc tgagctgggt caggttgcca ttgcccgagg cggccaggcc ctcgcggcca
    18661 gccgaggcga gcagggccgt gcgcatcttg gtcttgctgt gccccagctt cacgtggccg
    18721 atttcgtggc cgatcacgcc acgcacttcg tcgtcgctgg ccatgtccat caggccggta
    18781 tagacgcgca cgcagccgtt ggccatcgcc caggcgttga cgtcggcggt gcggtagacc
    18841 ttgaagttca ggttcaggcc gtcctcgttg gccaggccct gggtgatctt ggccaggcgc
    18901 tgggcatagg gatcattgcc ggcaaccacc tggttgtcct tgtccatgta ggtgcaggcc
    18961 tggtcggcgg cggccgagac ctcggcgtcg gacagggtca gcgccttgcc ggccttcatg
    19021 ccggtgctgg tcaggccctt caggtcgatg gccgaggcat tggcggccag caggcaggcg
    19081 gccaggcaga gggtggaacg catgatcgtc attgaattga tgctccttgg atgggaatgg
    19141 accgcgcgtc cccctgttcc cgcggcggtc gggaagtcta ccggcatcgt gcaggcccgt
    19201 gtccaggcgc gcgaccgccg ggttcgggcc gcctcgccgc gggccgggtg gctgcggtat
    19261 cattcgcagt catcttttga atgcatgacc gccgacatga tcgaactgaa tcctgtccgc
    19321 cagcgcatca ccgatctgac cgatcgcgtg ctgtcgcttc gggggtatct ttgactacga
    19381 cgccaagaaa gagcgtcttg aagaagtaac gcgggagctg gaaagccccg acgtctggaa
    19441 caacgccgag tacgcccaga acctgggccg cgagcgttcc agcctggaaa agaccgtggg
    19501 cggcatcgcc tcggtactgg acggcctgac cgacgcgacc gaactgctgg agctggccga
    19561 gtccgaacag gacgaggaca ccgcgctggc cgtggtcgcc gacctggaca aacaccaggc
    19621 gcacgtcgag aagctggaat tccagcgcat gttctccggc gagatggaca atgcggcggc
    19681 attcgtcgac atccaggctg gtgccggtgg taccgaagcc caggactggg ccgagatcct
    19741 gctgcgcatg tacctgcgct ggtgcgaatc gcgcggctgg aagaccgagc tgatggaagt
    19801 ctccggcggc gacgttgccg gtatcaagtc ggccacgctg cgcgtggaag gcgactatgc
    19861 ctatggctgg ctgaagaccg agaccggcgt gcaccgcctg gtgcgcaagt cgccgttcga
    19921 ttcggacaac cgccgccaca ccagcttcac ctcggtgttc gtgtcgccgg aaatcgatga
    19981 caacatcgat atcaccatca atccggccga cctgcgtacc gatgtctacc gttcgtccgg
    20041 tgccggtggc cagcacgtca acaagaccga gtcggcggtg cgaatcaccc acatcccgac
    20101 caacatcgtc gtggcctgcc agaccggccg cagccagcac cagaaccgcg acaacgcgat
    20161 gaagatgctg gccgccaagc tgtacgagct ggaaatccag aagcgcaacg ccgagaagga
    20221 tgcggtggaa gccaccaagt ccgacatcgg ctggggcagc cagatccgca actacgtgct
    20281 tgaccagagc cgtatcaagg acctgcgtac cggcatcgag cgttcggaca cgcagaaggt
    20341 gctcgacggt gacctggacg aattcgtcga ggccagcctg aaggccggcc tggccgtggg
    20401 ttccaagcgc gtcgatgcct gatccacgcg cctgcgcgga tatcatcgcc ttccgcaacg
    20461 gagggcgatg atgcgcagcg aaagtgaacg caaggaactg ggcggcttcc tcaaggcctg
    20521 ccgcgcccgt gtcgacccca ccacgctcgg cctgccggcc ggtcgccggc gtaccccggg
    20581 cctgaagcgc gaggaagtgg cgctggcgat cggggtcagc gtcagctggt acacatggat
    20641 cgaacagggg cgcgaagtgc gcgcctcgcc cgaggtgctg gagcgcctgg cggaggtgct
    20701 gcgcatgagc gacgacgagc gcgcctatgc gttcgcgctg tccggctatg gcgtgccatt
    20761 ggagtcgccg gacgagagcg tgaccgacgg cctgcgccag ctggtggagg cgatgcagcc
    20821 gatcccggcc tacgtgcgca atacccgttt cgacatcctg gcctggaacc cggccatcgc
    20881 cgagcttttc gtcgactaca gccagttggc gccgcatgag cgcaacacgc tgcggctgat
    20941 gttcctgtac ccgccgtacc gcacgctgat cctcaactgg gaagaaatga cccgcggcct
    21001 gctggcaggc ttccgtgcgg cgatggcgca ggcgccggac aaggcgccgt tcctggcgct
    21061 ggtcgaggat atcgcggcgc acagtgaaga gtttcgccag tggtggccgg agcacgacgt
    21121 gcgccggttc gacgagggtg cgaagaagct gaaccatccc acgcgcgggt tgctggacct
    21181 gcagtacgtg gcgctggtgc cggagagccg gcacgacctt tcgctggtga cctacctgcc
    21241 gcggaagtag ggggg
//
LOCUS       DAOKIP010000051        21248 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.051,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000051 DAOKIP010000000
VERSION     DAOKIP010000051.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 21248)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21248)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21248
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.051"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(60..2033)
                     /locus_tag="QEL58_001652"
     CDS             complement(60..2033)
                     /locus_tag="QEL58_001652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AsmA family protein"
                     /protein_id="HDS1676130.1"
                     /translation="MNAAASPATSRTSRWRLRRPGPHGRRWLTVLIFLLAAVLLLIAL
                     WDWNWFKGPVERAVQARTGRVLHIGHLDVDLGRTSTIRADAITFANASWAKQPDMASA
                     DRVEIDVRVWPLLRGSVQLPEVRLTRPDVLLETAPRKGEPGNWDFLGDSAGGPGLQLK
                     RLRIDDGRLQFLDALGRTDIRLDVRSGQPKQADAAPPLLVQGKGRWQGNPFTLRGGTE
                     SPLQLTDSDHPFRIHLDGRAGATHAVASGTLTNPFQLRVFDLQFALSGQDLADLYPLL
                     GIAIPSSPPYALNGRLKRDHDTWRYEQFTGKVGDSDLGGNLQFDVGGARPRLTATLES
                     RRLDFDDLAGFVGAPPKTGSGETANAEQKAEAARIAARARVLPDTPYNLGKLRAMDAD
                     VRWKAHRINAPSLPLDDMDAHLLLDDGVLRLDPLNFGVAGGDIRSTIRMDARQAQIST
                     ALKASVRGVQLGQLFPDAKLAEQAKGGIGGEVDLSGRGNSIAAMLGSSSGKVGLAMGR
                     GHVGNLVMELAGLDVTESLKFLVTGDKQIPLRCAFADFGVRDGLMTSQALAVDTTDTI
                     IIGEGTVSLRDETLDLLLKPRPKDKSILVLRSPLHITGTFKDPSFRPDFKALGIRGAV
                     ALALGSIAPPAALLATIELGPGKDADCGGQYAK"
     gene            complement(2118..2756)
                     /locus_tag="QEL58_001653"
     CDS             complement(2118..2756)
                     /locus_tag="QEL58_001653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010482744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin III family protein"
                     /protein_id="HDS1676131.1"
                     /translation="MSTTSVASIREEIASALTHGLGAVLALGAGAVLITLAAIYSDGW
                     QLAGAIVFGIALLLLYTASTLYHAIQHPVAKGRLKVFDHCAIYVLIAGTYTPFTLIGL
                     RGPWGWGLFAAIWTLALAGVVFKLFYTGRFKRLSTAIYVAMGWLVIVAVKPMLASIDG
                     WTLGWLLAGGLSYTLGTYFYHRESIPYSHAIWHLFVIGGSVCHFVAVTMQVL"
     gene            complement(2931..4535)
                     /locus_tag="QEL58_001654"
     CDS             complement(2931..4535)
                     /locus_tag="QEL58_001654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017354620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 3"
                     /protein_id="HDS1676132.1"
                     /translation="MSEVANEASRRRTFAIISHPDAGKTTLTEKLLLFGGAIQMAGSV
                     KGRKAARHATSDWMALEKERGISVTSSVMQFPYEGKIVNLLDTPGHADFGEDTYRVLT
                     AVDSALMVIDVAKGVEERTIKLMEVCRLRDTPIMTFINKLDREGKDPIELLDEVETVL
                     GIQCAPVTWPIGMGQRLKGVVHLLTGEVHLYEPGRNFTRQDSTIFPSIDAPGLAEKIG
                     AQMLADLRDELELVQGASHPFDLDAYRAGKQTPVFFGSGVNNFGVQPLLDFFVEHAPS
                     PQARSTTGREIAPEENKLTGFVFKIQANMDPQHRDRVAFMRVCSGRFSAGMKTFHVRT
                     GKEMKLANALTFMASDREIAAEAWPGDVIGIHNHGTISIGDTFTEGEAVTFTGIPNFA
                     PELFRRARLRDPLKLKQLQKGLAQLSEEGATQFFRPLTSNDLILGAVGVLQFDVAAYR
                     LKDEYGVEATFEQVSVTTARWVHCSNEKKLEEFREKNALNLALDAAGHLVYLAPTRVN
                     LQLAQERSPDVRFSATREAAHTVSAS"
     gene            complement(4602..5486)
                     /locus_tag="QEL58_001655"
     CDS             complement(4602..5486)
                     /locus_tag="QEL58_001655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010482746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HDS1676133.1"
                     /translation="MPRLPLTCLLLCLLASATAHAGDWRQGWGLVPKTAPAAAGESAL
                     DATPMARLRLQPVGEQWQARIDNGLAGPLQIELRAAPGHPVEGLPVESLLQGDSSLVV
                     GHLPAPVDGRALDLRLQSVPGNPAARAEDVAYRLPFEAARLRVDQAPQGRFSHDDEEN
                     REAVDFALPEGTLVLAAREGTVMQIQDGFRGNGQDRERDAARANFIRVLHSDGSMALY
                     GHLQAGGMRVRRGQAVQAGQPIGLSGNSGYSSAPHLHFVVQVNRGMGLRSVPVRIFAA
                     QGQLQFARQAGADGGIGR"
     regulatory      5636..5754
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00162"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="SAM riboswitch class I; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="S-adenosylmethionine"
                     /db_xref="RFAM:RF00162"
     gene            5832..6863
                     /locus_tag="QEL58_001656"
     CDS             5832..6863
                     /locus_tag="QEL58_001656"
                     /EC_number="2.3.1.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010482747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine O-succinyltransferase"
                     /protein_id="HDS1676134.1"
                     /translation="MSFAASTALRPEPFVPVSVPVDDRVHAERGEFAAVLSMRHAGPS
                     PVRLRYEWVGPASAPVVVLAGGISAHRHVASNPQFSEKGWAEDLVGKGRALDPQQLRV
                     LAFDFIGADGALDVPIDTADQADALALLLDHLGIRALKAFVGYSYGALVGQQFAIRHR
                     ARVRQLVLASGAHRPHPYAAAWRALQRRAVALGQLQCGEDHGLALARQFAMLSYRTPE
                     EFGERFDAAPEVINGRVRVAAEDYLDAAGAQYVARTPVTAYLRLSESIDLHRVDPAAI
                     LPPTVVVAVEGDRLVPLADLVGLVEGLGPRGSLRVLRSPYGHDAFLKETDRIDAILAT
                     AFRTSGESA"
     gene            6860..8095
                     /locus_tag="QEL58_001657"
     CDS             6860..8095
                     /locus_tag="QEL58_001657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014038152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-succinylhomoserine (thiol)-lyase"
                     /protein_id="HDS1676135.1"
                     /translation="MSLHANEPSCSRTTAAVRAGIDRDTAHGAVTPPIVLSSNFSFEG
                     FGNKRQYDYTRSGNPTRDLLGEALAELEGGAGGVITATGMGAINLVLNALLQPGDTLV
                     VPHDAYGGSWRLFNALAKKGHLELVTADLTDPRALAQALATQPKLVLVETPSNPLLRI
                     TDLRFVIDAAHKAGALVVVDNTFLSPALQQPLSFGADLVLHSTTKYINGHSDVVGGAV
                     VARDPALHEQLVWWGNALGLTGSPFDAFLTLRGLRTLDARLRVHQENTASIVALLDQH
                     PAVGAVYYPGLADHPGHAIAARQQDGFGAMLSFELAHCAGDDPHAAVRAFVDGLRCFT
                     LAESLGGVESLIAHPATMTHAAMTAEARAAAGISEGLLRLSVGIEAERDLLADLGAAL
                     QRAEAVIDAAARRKQVVDA"
     gene            8092..9159
                     /locus_tag="QEL58_001658"
     CDS             8092..9159
                     /locus_tag="QEL58_001658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008264831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine dehydrogenase"
                     /protein_id="HDS1676136.1"
                     /translation="MSALAAEIPVLGAGRLALLGTGTVGSAFVQRYQALQARGLELPS
                     VQWLANSRTALAIDRDLALPLELARRAPRDGHSAPPWASAEGLERGDVVVDATASEDV
                     AARHVQWLARGVHVVTANKLGRGAQLARAQAIAESCADSGARYGDSATVGAGLPLLSS
                     LRALVAGGDHIHAIEGVLSGSLAWLFHRYDGQSPFSAAVREALAAGYTEPDPRLDLSG
                     EDVRRKLLILARSSGLALDASQVQVDSLVPETLAALPLEDAVAALEQLDAPLQARWQQ
                     ARDNGRVLRFVGRVDGQGAQVGLRELPADHPLAQGAGTDNRVAIHSDRYQRQPLLIQG
                     PGAGAEVTAAALLDDVLRIVR"
     gene            complement(9192..10187)
                     /locus_tag="QEL58_001659"
     CDS             complement(9192..10187)
                     /locus_tag="QEL58_001659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005418394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDS1676137.1"
                     /translation="MRLLAAALLACLPMSALAAPTYGPRLEGFDYGYPVKTFALESQQ
                     QPLEMAYLDVLPKRRAIGVVVLLHGKNFCAATWQQTIAPLLAAGYRVIAPDQVGFCKS
                     SKPERYQYSFAQLAANTHALLQQLQLGDVPVHLVGHSMGGMLAVRYALMYPQDLRSLS
                     LVNPIGLEDWKALGVPWRSVDEWYAGELKTSYDSIRRYQLDVYYDGQWKADYEPWARM
                     QSGMYEGPGKQAVAWSQALASDMVFNQPVVYELKHLQVPTTLFIGQKDRTAIGRDRAS
                     PALKATLGNYPALGKAAAAAIPGATLVEFAELGHSPQVQDPKQFNAALLKALKAR"
     gene            complement(10266..11648)
                     /locus_tag="QEL58_001660"
     CDS             complement(10266..11648)
                     /locus_tag="QEL58_001660"
                     /EC_number="4.3.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014161485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-serine ammonia-lyase"
                     /protein_id="HDS1676138.1"
                     /translation="MAVSTFDVFKIGIGPSSSHTVGPMKAAERFIHRWLLDPGRLHEV
                     ARIRADVYGSLALTGRGHGTDKAILLGLEGQRPNLIDPDIIPATLERIRSSKRIQLMG
                     QHEIAFDEKRDLGMNKRQKLPYHTNGMRFTAYNADDEVIATRDYYSVGGGFVVNQDDA
                     ADDRIVPDETPLPYPFKSGDELLAQTARSGLSIAQLMFENEKCWRSEDEIRAQLREIW
                     SAMQSCVTRGIREEGVLPGGLKVGRRAPALYRELSSKPEAAMRDPLTTLDWVNLYALA
                     VNEENAAGGRVVTAPTNGAAGVLPAVLHYFDRFCPGANEQRVFDFLLTSAAIGILYKE
                     NASISGAEVGCQGEVGVACSMAAGGLVAALGGNPSQIENAAEIGMEHNLGLTCDPIGG
                     LVQIPCIERNAMGAVKAINASRMAMRGDGKHKVSLDKVIKTMRDTGRDMQDKYKETSR
                     GGLAVNVIEC"
     gene            11748..12020
                     /locus_tag="QEL58_001661"
     CDS             11748..12020
                     /locus_tag="QEL58_001661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014038148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin family protein"
                     /protein_id="HDS1676139.1"
                     /translation="MLTLIQRDDCHLCDLALAELAKARAPEFESVFLDDQPALETRYG
                     ARVPVLRDEAGQRELDWPFDAATVQAWLAECDQVVPAAGRQPPDIR"
     gene            complement(12054..12626)
                     /locus_tag="QEL58_001662"
     CDS             complement(12054..12626)
                     /locus_tag="QEL58_001662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YceI family protein"
                     /protein_id="HDS1676140.1"
                     /translation="MTLKLTTPAAVAAALAGMLATAPVLAADYAQAPGAGSILVFATK
                     YDGEVFTGSFPGFATKLSFDPANPAAGSLDVVIPLAGAKSGNSDRDSTLQTADFFNVG
                     KFATARYTAKGFRAVGNDQFAADGTLELRGVSKPVTLTFTWKPGTQPVLTGKATVKRL
                     DFGVGGGDWADTKTIPDETAISTIVKFNAK"
     gene            complement(12630..13202)
                     /locus_tag="QEL58_001663"
     CDS             complement(12630..13202)
                     /locus_tag="QEL58_001663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b"
                     /protein_id="HDS1676141.1"
                     /translation="MTAKNTPAAWGSVSQILHWLIALLILALGVVGLTMGELPKTPKY
                     FWVYTAHKSIGITVLALVLFRLGWRLYAGAPKPVPGVPSWQERIASATHVLLYVLMFA
                     IPLSGWLYDSASGLRPFRWFGLVDVPKLSGPDPQVVAVSHAIHEYGFWLLIAVVLAHA
                     GAAFYHHLFQRDATLSRMLPRGWLASPQKD"
     gene            complement(13213..13845)
                     /locus_tag="QEL58_001664"
     CDS             complement(13213..13845)
                     /locus_tag="QEL58_001664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyisoprenoid-binding protein"
                     /protein_id="HDS1676142.1"
                     /translation="MRSCLALLPMLLATAPAWADADTYRLDPVHTRVLFSIDHAGYSQ
                     AMGTVSGSEGRLQFDPDNWREATLDVEVPVSRLDLGDAKWNQATLARSLLDGERFPNA
                     RFVSSRVEPIDAKRAHVIGTLTLRGVSQEITLEVTLNAIKRYPLPPFRRTAGFSASTT
                     LSRRAFGITAWPGVIGDAVQLRIEAEATLDRSDAPGTPAPVPHSDPKTAR"
     gene            14011..17556
                     /locus_tag="QEL58_001665"
     CDS             14011..17556
                     /locus_tag="QEL58_001665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014038145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HDS1676143.1"
                     /translation="MTSSWRLWWRGIAGLGLLLMAFAAAAAPLEMAETPRLRRFGAAE
                     GMPSRMVLALAEDRQGHVWAATDGGLVRYDGASLRVWEHDPEQPGSLPGNEIETLLVD
                     PLDRVWVGINGKGLARLDADRERFRTFDAVNGPCLGQFWTLAYAEDALWIGTSSQGIC
                     RFGEDGSLRFFKHDPARADGLPSNTIYSSLVDARGRLWIGTEAGVARWNGHGFEPVAA
                     RELGTLSVLRMSRDADGSIWIGSQNDGLYRIDAQDRVSRPRWTDSARLRSALVLADRQ
                     GGYWAGTSDGLLRGDASALWRLDGDRGSGFLTAQSGVLDLLQDHEGGVWVALLTQGLA
                     YLPPDWRRFSIWNQLDGKPLDSQYLLSAASDGQAYYVGSAHGVYQLDAHGTLRLLASD
                     RQIGSGAVWSVLPRPDGRLWLGRAGRISVYDPASRALQDWRIDGGADLRQRIDLMRQA
                     PDGTVWLSVMNLGLQQRSADGRVLRSYPLDDFRKAADSPIEQIRFDAHGKAWIMGEMG
                     IWREQAGRFEAVPGVSSGLIFDLVWVDPQQLWLARQGALERYQWDGMSLRLIQRVDGS
                     AGVPPVSMGGLALADDGRVWATTPRGLLRWDPKARRLQLFNERDGLSDAEFTSRPPAV
                     NADGRVLAVAQTGLVAFDVNAVDVALPASSLVIAEVRVRRDDARGWQPLPDTGTLLLG
                     PDDRDLQIDARLLSYANPQGNRYRFRVRGYDQDWVEQGGDGQRTLSRLPTGSYVIEVQ
                     AATANGAWTPSQQLKVKVLPPWWRSGMAIFGYILIGSLLLLTLAWSIRGRLRRRQQWQ
                     LTVHKQELAEQASQAKSRFLATLGHEVRTPMTGVLGMSELLLATTLDPVQRSYAGSIQ
                     QAGSHLLRLVNDALDLARIEAGRLELDLRPFDLAGLLDQVQVLMQPMAKQRRLDFQRG
                     NDPQGPISVSGDEMRVRQILLNLLGNAIKFTERGHVGLAVRLEDNGGGVCFEVYDSGP
                     GINAEQQERLFHRFEQADGPRTASRYGGSGLGLAICQELAVAMGGRIDVESSPGKGAR
                     FRVRLPLPWTRQAAAAAGDVPSLPVLPPLRILLVEDDATVAEVIAGLLRSRGHDVVHV
                     LHGLGALSEIATDGFDVGLLDLDLPALDGTAIARQLRALGYELPLVAVTARSDAYAES
                     QVLAAGFDGFLRKPVTGDMLVAAIVQARAKRQDMA"
     gene            17652..21179
                     /locus_tag="QEL58_001666"
     CDS             17652..21179
                     /locus_tag="QEL58_001666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005418385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HDS1676144.1"
                     /translation="MAYLRAAMLLLILLCGLSPAAAQPVPPSPRQVTVFDGLPSNTVN
                     RMAEDRYGYLWIATNDGLARYDGRNYRIWRSEDGLRDNRIWTVLVDARNQLWIGTENA
                     GLVRMSADRRQLHFYDRSSQPLMGTNTVWSLAATPDGSVWFGTHEGGLYRLDNQDRLQ
                     RFLPEANNPRSLPAASVPYLATLADGSLWIGTKHGVARWTGTDFERVGSDVIPSLLIN
                     GLTAEPDGSLWISTMAGATVRRPDGRFETPPWKLPQGEQVLGMMLRDEQGGYWLDTRT
                     GLGRAVDGQYQAVPLYSAVARGPVRPNWTGAYEDREGGIWLASTNAGLWHLLPRWWQF
                     SVLSRLEDDPSSLRNAFVLGTSPSSNGGIWTVGGHGALDRFDPKTGKVEQHRTWVNGM
                     HWLTSVREDRRGQVWIGSNDALLRYDPKLRDLRRWGRDAGADATMEGVIESMMTCDGD
                     SLWLMLPSGLQQRDLDGRLRRQLDNGQRGLQQGQLNLDVECGPQDHIWLASSRGLLQW
                     LPESERFQPVPGAPATAIHALHVGRDGQVWLSEDGRLSRYRWSQGRLERQAVVGAEQG
                     YPAISASGLVVDAQGVAWATSARGLVRIGADGQSVRLYGVHDGLPSQEFREHTLVMSG
                     DGHLVAGTPAGVVVFDPELVRPSVRRAPLVIERVEVRRNEQVLDLTHDTPLQIVDGDR
                     DLRIVARLLSFADSASNTYRYRLAGYDPDWVEVGPAGERLFSRLPPGSYRLEVQARSA
                     DHVWSRVQSLEFRVQPPWWRSLSGLLVLASIALLLTSWFAWLYRRRLQRRHAYQLALH
                     KQELAEQASAAKTRFLANLGHEIRTPMTGVLGMSELLLASPLDPQQRGYTQSIRHAGE
                     HLLHLVNDALDLARIESGRLELQHKPFALSCLLQDLAALMGPLAAQKGLRFTLDNQLP
                     PGLQATGDAMRVRQILLNLLSNAVKFTSRGTITLHARSDGELRALHFEVRDTGPGISQ
                     EQQQRLFRRFEQADGARTAAQYGGSGLGLAICRELAQAMQGRIQVESQLGRGTCFGVT
                     LPLPLVVDASAEAEGGTHREEAANMPPLRVLLVEDDATVADVVRGLLSARGHEVVHAG
                     HALAALREISAGDFDVGLLDLDLPGLSGFELAQHLRNQGYMLPLLAVTARTDPDLQQQ
                     VEAAGIGGFLRKPVTGELLVEAIARVMGR"
BASE COUNT         3269 a         6971 c         7517 g         3491 t
ORIGIN      
        1 gggtcaccca tcccccttaa gccacgatca atgcaggcgc cgtgaacaac gctgttagcc
       61 tacttcgcat actgcccacc gcagtcggca tccttgcccg gccccagttc gatggtcgcc
      121 agcagcgccg ccggcggggc gatgctgccc agcgccaggg ccaccgcgcc acgaatgccc
      181 agcgccttga agtccggccg gaacgacgga tccttgaatg tgccggtgat gtgcagcggc
      241 gagcgcagca ccaggatgct cttgtccttc gggcgcggct tcagcagcag gtcgagggtc
      301 tcatcgcgca ggctgaccgt gccctcgccg atgatgatcg tatcggtggt atccaccgcc
      361 agcgcctggc tggtcatcag cccgtcgcgc acgccgaagt cggcgaaggc gcagcgcagg
      421 ggaatctgtt tgtcgccggt caccaggaat ttcaacgact cggtgacatc cagcccggcc
      481 agttccatca ccaggttgcc gacatggccg cggcccatcg ccaggccgac cttgccgctg
      541 ctgctgccca gcatcgcggc gatcgagttg ccacggccgc tcaggtcgac ttcgccgccg
      601 atgccgccct tggcctgctc ggccagcttt gcatccggga acagctggcc cagctgcacg
      661 ccgcgcacgc tggctttcag tgcagtgctg atctgcgcct ggcgcgcatc catgcggatc
      721 gtgctgcgga tatcaccgcc ggccacgccg aagttcagcg ggtccagccg cagcacgccg
      781 tcatccagca gcaggtgcgc atccatgtcg tccagcggca gcgagggtgc gttgatgcga
      841 tgggccttcc agcgcacgtc ggcatccatc gcacgcagct tgccgaggtt gtagggcgtg
      901 tcgggcagta cccgggcacg ggcggcgata cgcgcagcct cggccttctg ctcggcgttc
      961 gcggtctcgc cgctgccggt cttcggtggc gcaccgacga agccggccag atcgtcgaag
     1021 tccaatcgcc gggattccag cgtggccgtc agccgcgggc gtgcgccgcc gacgtcgaac
     1081 tggaggttgc caccgagatc gctgtcgccg accttgccgg tgaactgctc gtagcgccag
     1141 gtgtcgtggt cgcgcttgag gcggccattc aacgcgtacg gcggcgagga cggaatggcg
     1201 atgccgagca acgggtacag gtcggccagg tcctggccac tgagtgcgaa ctgcaggtcg
     1261 aacacgcgca gctggaacgg attggtaagc gtgccgctgg ccaccgcgtg ggttgccccg
     1321 gcgcggccat cgaggtggat gcggaacggg tggtcgctgt cggtcagctg cagcggtgat
     1381 tcggtgccgc cgcgcagggt gaacggattg ccctgccagc ggcccttgcc ctgcaccagc
     1441 agcggcggtg cggcatcggc ctgtttcggc tggccgctgc gcacatccag ccggatgtcg
     1501 gtgcggccga gcgcatccag gaactgcagt cggccgtcat cgatgcgcag gcgcttgagc
     1561 tggaggcccg gcccgccggc gctgtcaccg aggaaatccc agttgcccgg ctcgcccttg
     1621 cgcggggccg tttccagcag gacgtccggc cgggtcaagc gcacttcggg caactgcacg
     1681 ctgccacgca gcagcggcca cacccgcacg tcgatctcga cgcgatcggc gctggccatg
     1741 tccggctgct ttgcccagct ggcattggcg aaggtgatcg cgtcggcgcg gatcgtgctg
     1801 gtgcggccca gatccacatc caggtggccg atgtgcagta cccggccagt acgcgcctgc
     1861 acggcgcgtt cgaccggccc cttgaaccag ttccagtccc acagtgcgat caacagcagg
     1921 accgccgcca gcaggaagat caggaccgtc agccagcgcc ggccgtgcgg gccgggtcgg
     1981 cggaggcgcc agcgggaggt gcgcgatgtg gcgggggagg cggcagcatt cacgctgcca
     2041 tggttgcccc ctcatcgtgg acggggcgcg aagcacccat gtgcgcggtg tgcacaaccc
     2101 gcgcgcgggc cactgtctta cagcacctgc atggtgaccg cgacgaagtg gcagacgctg
     2161 ccgccgatca cgaacaggtg ccagatcgca tgcgaatagg ggatcgattc gcgatggtag
     2221 aagtaggtgc ccagggtgta tgacaggccg ccggccagca gccagcccag cgtccagccg
     2281 tcgatcgagg ccagcatcgg cttgactgcc acgatcacca gccagcccat ggccacgtag
     2341 atcgcggtgg acaggcgctt gaagcggccg gtgtagaaca gcttgaacac cacgccggcc
     2401 agggccaggg tccagatcgc cgcgaacagc ccccagcccc acggaccgcg caggccgatc
     2461 agggtgaacg gggtataggt gccggcgatc aggacgtaga tcgcgcagtg gtcgaacacc
     2521 ttcaggcgac ccttggcgac cgggtgctgg atggcgtgat agagggtgga ggccgtatac
     2581 agcagcagca gcgcgatgcc gaacacgatg gcgccggcca gctgccagcc atcactgtag
     2641 atggcggcca gggtgatcag taccgcgccc gcgccgaggg cgagcacggc gcccaggccg
     2701 tgggtcaggg cgctggcgat ttcttcgcgg atcgaagcaa cggaagtcgt ggacatggcg
     2761 taggcatcgt tcgcggggag ggggacccgc acccccctat catcgccgcg atgggcggcg
     2821 catgcacgcc catcaccgta tggtcggtga atccccgcgt tgcgcggatg cgcccgcgat
     2881 cagcagatcc acgccatgcg tggatgaacc gccgtggggc cccttgcggt tcagcttgcc
     2941 gataccgtat gcgccgcttc gcgggtggcc gagaagcgca catccggaga acgttcctgc
     3001 gccagctgca ggttgacccg ggtcggtgcc aggtagacca ggtggccggc cgcatccagc
     3061 gccagattca gcgcattctt ctcgcggaac tcttccagct tcttctcgtt gctgcagtgg
     3121 acccagcgtg cggtggtcac gctgacctgc tcgaacgtgg cttccacgcc gtactcgtcc
     3181 ttcaggcggt aggcggccac gtcgaactgc agtacgccca ccgcacccag gatcaggtcg
     3241 ttgctggtga gcggacggaa gaactgggtt gcaccttctt cggacagctg ggccaggccc
     3301 ttctgcagct gcttgagctt gagcggatcg cgcaggcgtg cacggcggaa cagttccggg
     3361 gcgaaattgg gaataccggt gaaggtgacc gcttcgcctt cggtgaaggt atcgccgatg
     3421 gagatggtgc cgtggttgtg gatgccgatc acatcgcccg gccacgcttc ggcggcgatt
     3481 tcacggtcgc tggccatgaa ggtcagcgca ttggccagct tcatttcctt gccggtacgc
     3541 acgtggaagg ttttcatgcc ggcgctgaaa cggcccgagc agacgcgcat gaacgccacg
     3601 cggtcacggt gctgcgggtc catgttggcc tggatcttga acacgaagcc ggtcagcttg
     3661 ttttcttccg gtgcgatctc gcggccggtg gtggagcgcg cctgcggcga cggcgcatgt
     3721 tcgacgaaga agtccagcag cggctgcacg ccgaagttgt tcacgcccga accgaagaac
     3781 accggggtct gcttgccggc gcggtacgcg tccaggtcga aggggtggct ggcgccctgc
     3841 accagttcca gttcgtcgcg caggtcggcc agcatctgcg caccgatctt ctcggccagg
     3901 ccgggggcat cgatggacgg gaagatggtc gagtcctggc gggtgaagtt gcggcccggt
     3961 tcgtacaggt gcacttcgcc ggtcagcagg tgcaccacgc ccttcaggcg ctggcccatg
     4021 ccgatcggcc aggtgaccgg ggcgcactgg atgccaagca cggtttccac ttcatccagc
     4081 agctcgatcg ggtccttgcc ctcgcggtcg agcttgttga tgaaggtcat gatcggggtg
     4141 tcgcgcaggc ggcacacttc catcagcttg atggtgcgct cttccacgcc cttggccacg
     4201 tcgatcacca tcagcgccga gtccaccgcg gtcagcacgc ggtaggtgtc ctcgccgaag
     4261 tcggcgtggc cgggggtgtc gagcaggttg acgatcttgc cttcgtacgg gaactgcatc
     4321 accgacgagg tgacggagat gccgcgctcc ttttccagtg ccatccagtc ggaggtggcg
     4381 tggcgggcgg ccttgcggcc cttgaccgaa ccggccatct ggatcgcgcc tccgaacagc
     4441 agcagctttt cggtcagcgt ggtcttgccg gcgtcagggt gggagatgat ggcgaaggtg
     4501 cggcgacgcg acgcttcgtt ggcgacttcg gacatggcag tggcgcccgc ccggggcgct
     4561 tttcaaagag ataagcgccc gattataccg gccggcgccg gtcagcgccc gatgccgccg
     4621 tcggccccgg cctggcgggc gaactgcagc tggccctgcg cggcgaagat gcgcaccggc
     4681 accgagcgca ggcccattcc gcggttgacc tgcaccacga agtgcaggtg cggggcactg
     4741 ctgtaaccac tgttgccgga caggccgatc ggctgcccgg cctgcactgc ctggccgcga
     4801 cgtacgcgca tgccaccggc ctgcaggtgg ccatacaggg ccatgctgcc gtcgctgtgc
     4861 agcacgcgga tgaagttggc gcgggcagca tcgcgttcgc ggtcctgccc attgccacgg
     4921 aagccatcct ggatctgcat caccgtgcct tcgcgcgcgg ccagcaccag ggtgccctcc
     4981 ggcagtgcga agtcgaccgc ctcgcggttc tcctcgtcat cgtggctgaa ccggccctgc
     5041 ggcgcctggt ccacgcgcag gcgcgcggcc tcgaagggca ggcgataggc gacatcttcg
     5101 gcccgtgcgg ccgggttgcc cggcaccgac tgcaggcgca ggtcgagcgc ccggccatcg
     5161 accggggcgg gcagatggcc gaccaccagg ctgctgtcac cctgcagcag tgattcgacc
     5221 gggagaccct cgaccgggtg tcccggcgcc gcgcgcagtt cgatctgcag cggccccgcc
     5281 agcccgttgt cgatccgcgc ctgccattgt tcgcccaccg gctgcaggcg cagtcgagcc
     5341 atcggcgtgg catccagggc cgattcccca gcggcggcag gggcggtctt gggcaccagc
     5401 ccccagccct ggcgccagtc gcctgcatgg gccgtcgcgc tcgccagcag gcacagcagc
     5461 aggcaggtca ggggcaggcg tggcatccgt ggttccggtc aaaaggggcc gccgggactg
     5521 tacccgatcc tgaacgggac gaccgggacg gcctccgcag agttcatctg caaatatcca
     5581 tcgctttatc cgcatgaagg gattgacagt gctggaaagg gctggcatcg tggccccacc
     5641 atcgagaccg gcagagggac aggccctttg aagccggggc agcccgcagg cgcgcaagcg
     5701 actgcgtagg tgccaaatcc tgcggggacc gtggcgtcca ccgaaagatg gttcgaacca
     5761 tgcaccccac gtgcatctcg aacgcgggcc ccgcgaaggc tcgatggccg attccccaac
     5821 cggatcccgc catgagcttc gccgccagta ccgcgcttcg ccccgaaccc tttgtccccg
     5881 tcagcgtgcc ggtcgatgac cgcgtgcatg ccgagcgcgg tgagttcgcc gcggtgctgt
     5941 cgatgcgcca cgccggcccc agcccggtgc gcctgcgcta tgagtgggtc ggcccggcga
     6001 gtgcgccggt ggtggtgctg gccggtggca tttccgccca ccgccatgtg gcgtccaacc
     6061 cgcagttcag cgagaagggc tgggccgaag acctggtcgg caagggccgc gcgctggacc
     6121 cgcagcagct gcgcgtgctg gccttcgact tcatcggggc agatggcgcg ctggacgttc
     6181 cgatcgatac cgccgaccag gccgatgcgc tggcgctgct gctggatcat ctgggcatcc
     6241 gcgcgctgaa ggcattcgtc ggctattcgt atggcgcgct ggttggccag cagttcgcga
     6301 tccgccatcg tgcccgcgtg cgccagctgg tgctggccag cggcgcgcat cgcccgcatc
     6361 cgtatgccgc ggcctggcgc gcactgcagc gccgcgccgt cgcgctgggc cagctgcagt
     6421 gcggcgaaga ccacgggctg gcgctggccc gccagttcgc catgctcagc tatcgcacgc
     6481 cggaagaatt cggcgagcgc ttcgatgccg cgccggaagt gatcaatggc cgcgtgcgcg
     6541 tggccgccga agactatctc gacgccgccg gggcgcagta cgtcgcgcgc acgccggtaa
     6601 ccgcctacct gcgcctgtcc gaatcgatcg acctgcaccg cgtggaccct gccgcgatcc
     6661 tgccgccgac cgtggtggtg gccgtggagg gcgatcgcct ggtgccgctg gccgatctgg
     6721 tcggcctggt tgaaggactg ggcccgcgcg gcagcctgcg cgtgctgcgc tcgccctatg
     6781 gccacgacgc cttcctcaaa gaaaccgatc gcatcgacgc gatcctcgcc accgccttcc
     6841 gtacctctgg agagtccgca tgagcctgca cgccaacgag ccgtcctgta gccgtaccac
     6901 tgccgctgtc cgtgccggca tcgatcgcga taccgcgcat ggtgcggtca ctccgccgat
     6961 cgtgttgtcg tcgaacttca gctttgaagg cttcggcaac aagcgccagt acgactacac
     7021 gcgcagtggc aacccgaccc gcgacctgct gggtgaagca cttgcggaac tggaaggcgg
     7081 cgccggcggc gtcatcaccg ccaccggcat gggcgcgatc aatctggtgc tgaacgcgct
     7141 gctgcagccg ggcgacaccc tggtggtgcc gcacgatgcc tacggcggca gctggcggct
     7201 gttcaacgcg ctggcgaaga agggccacct cgaactggtc accgccgacc tgaccgatcc
     7261 gcgcgcgctg gcacaggcgc tggccaccca gccgaagctg gtgctggtgg aaaccccgtc
     7321 caacccactg ctgcgcatca ccgacctgcg cttcgtcatc gacgccgcgc acaaggccgg
     7381 cgccctggtg gtggtcgaca acaccttcct gtcgccggcc ctgcagcagc cgctgtcatt
     7441 cggcgcggac ctggtgctgc attccaccac caagtacatc aacggccaca gcgacgtggt
     7501 cggtggcgca gtggtcgcgc gcgatccggc actgcacgag cagttggtgt ggtggggcaa
     7561 tgcgctgggc ctgaccggct cgccgttcga tgccttcctg accctgcgcg gcctgcgcac
     7621 gctggatgcg cgcctgcgcg tgcaccagga aaacaccgcc tcgatcgttg ccctgctgga
     7681 ccagcatccg gcggtcggcg cggtgtacta cccgggcctg gccgatcacc cgggccatgc
     7741 catcgccgca cgccagcagg acggcttcgg cgcgatgctg tcgttcgagc tggcgcactg
     7801 tgccggcgac gatccgcatg cggcggtgcg cgcgttcgtt gatggcctgc gttgtttcac
     7861 cctggccgaa tcgctgggcg gcgtcgaaag cctgatcgcg catccggcga ccatgaccca
     7921 cgcggcgatg accgccgaag cgcgtgcggc ggccgggatc agcgaagggc tgctgcgcct
     7981 gtcagtgggc atcgaggccg agcgtgacct gctggccgat ctcggcgcgg cgctgcagcg
     8041 cgccgaagcg gtgatcgatg ccgctgcacg ccgcaaacag gtggtggacg catgagcgca
     8101 ctggccgctg aaattcccgt gctgggcgcg ggacgcctgg cgctgctcgg caccggcacg
     8161 gtgggttcgg cgttcgtgca gcgctaccag gcgctgcagg cacgcgggct ggaactgccc
     8221 agcgtgcagt ggttggccaa ttcgcgtacc gcgctggcga tcgatcgtga cctggcgttg
     8281 ccgttggagc tggcacggcg tgcaccgcgt gatggccaca gcgctccgcc gtgggccagc
     8341 gccgaaggac tggagcgtgg cgacgtggtg gttgacgcga ccgccagcga agacgtggcc
     8401 gcacgccacg tgcagtggct ggcgcgcggc gtgcacgtgg tgaccgccaa caagctgggg
     8461 cgaggcgcgc agctggcgcg cgcgcaggca attgccgaaa gctgcgccga cagcggtgca
     8521 cgctacggcg acagcgccac cgtgggggca ggcctgcccc tgctgagcag cctgcgcgcg
     8581 ctggtggccg gcggtgatca tatccatgcc atcgagggcg tcctgtccgg atcgctggcg
     8641 tggctgttcc atcgctacga tggccagtca ccgttctcgg ccgcagtgcg cgaagcgctg
     8701 gcggcaggct acaccgagcc ggatccgcgc ctggacctgt ccggcgagga tgtacgccgc
     8761 aagctgctga tcctggcccg cagcagcggg ttggcgctgg acgcgtcgca ggtgcaggtg
     8821 gattcgctgg tgcctgaaac gctcgccgcg ttgccgctgg aagatgcggt agccgcgctg
     8881 gaacagctgg atgcgccgct gcaggcacgc tggcagcagg cgcgcgacaa cggccgcgtg
     8941 ctgcgttttg tcggtcgcgt cgatggccag ggtgcgcagg tgggcctgcg cgagctgcct
     9001 gccgatcatc cattggcgca gggcgcgggc accgacaacc gcgtggccat ccacagcgat
     9061 cgctatcagc gccagccgtt gttgatccag gggccgggcg cgggcgcgga agtcaccgcc
     9121 gccgcgttgc tggatgacgt gctgcgcatc gtgcggtaag ggatcgccgg gcatcgcccg
     9181 gcgcgccccc ctcagcgcgc cttcaacgcc ttcaacaacg cggcgttgaa ctgtttcgga
     9241 tcctgtacct gcggcgaatg gcccagctcg gcgaattcga ccagtgttgc gccggggatc
     9301 gctgccgccg cggccttgcc cagtgccggg tagttgccca gcgtggcctt cagcgccggt
     9361 gatgcgcggt cgcggccgat cgccgtgcgg tccttctggc cgatgaacag ggtggtcggt
     9421 acctgcaggt gcttcagttc gtagaccacc ggctggttga ataccatgtc cgaggccaac
     9481 gcctggctcc aggcaacggc ctgcttgccc ggcccttcgt acatgcccga ctgcatccgg
     9541 gcccacggct cgtagtcggc tttccactgg ccatcgtagt agacatccaa ctggtagcgc
     9601 cggatgctgt cgtagctggt tttcagttcg ccggcatacc actcgtcgac gctgcgccac
     9661 ggcacgccca gcgccttcca gtcttccaac ccgatcgggt tgaccagtga caggctgcgc
     9721 aggtcctgcg ggtacatcag cgcatagcgc acggcgagca tgccgcccat cgaatggccg
     9781 accaggtgca ccggcacatc acccagctgc agctgctgca gcagggcgtg ggtgttggcg
     9841 gcgagctgcg cgaaactgta ctggtagcgc tcgggcttgc tggatttgca gaagcccacc
     9901 tggtccggtg cgatcacccg gtagcccgcg gccagcagcg gggcgatggt ctgctgccag
     9961 gtggccgcgc agaagttctt gccgtgcagc aacaccacca ccccgatggc acgccgtttg
    10021 ggcaggacat ccaggtaggc catttccagc ggctgctgct gcgattccag cgcgaaggtc
    10081 ttcactggat agccgtagtc gaaaccttcc agccgcggac cataggtcgg cgcggccagg
    10141 gcggacatcg gcaggcaggc gagcagggcg gcagcgagca ggcgcatggc gttctcgggg
    10201 gcgagggagc ccccagcgta atgcatcccg tcatgcgaag ccgagcatgg gctcggctct
    10261 acacctcaac actcgatgac gttcaccgcc aggccgccgc ggctggtttc cttgtacttg
    10321 tcctgcatgt cgcggccggt atcgcgcatg gtcttgatga ccttgtccag cgataccttg
    10381 tgcttgccgt cgccacgcat ggccatgcgc gaggcgttga tcgccttcac cgcgcccatc
    10441 gcgttgcgct cgatgcacgg aatctgcacc aggccgccga tcggatcgca ggtcaggccc
    10501 aggttgtgtt ccatgccgat ttccgcggcg ttctcgatct ggctcgggtt gccacccagc
    10561 gctgcgacca ggccgccggc cgccatcgag caggccacgc ccacttcgcc ctggcagccc
    10621 acttcggcac cggaaatcga ggcgttctcc ttgtacagga tgccgatcgc cgccgaggtc
    10681 agcaggaagt cgaacacgcg ctgctcgttc gcgccggggc agaagcggtc gaagtagtgc
    10741 agcaccgcag gcagcacgcc agcggcaccg ttggtcggcg cggtcaccac gcggccaccg
    10801 gcggcgtttt cctcattcac tgccagcgcg tacagattga cccagtccag cgtggtcagc
    10861 gggtcgcgca ttgctgcttc cggcttcgac gacagttcgc ggtacagcgc cggtgcgcga
    10921 cggcccacct tcaggccacc cggcagcacg ccttcctcac ggatgccgcg ggtcacgcac
    10981 gactgcatcg cgctccagat ctcgcgcagc tgggcgcgga tctcgtcctc gctgcgccag
    11041 cacttctcgt tctcgaacat cagctgggcg atgctcaggc cgctgcgcgc ggtctgcgcc
    11101 agcagctcgt cgccgctctt gaacgggtag ggcagcggcg tctcgtcggg cacgatgcgg
    11161 tcatcggccg cgtcgtcctg gttgaccacg aagccgccac caacggagta gtaatcgcgg
    11221 gtggcgatca cttcgtcgtc ggcgttgtac gcggtgaagc gcatgccgtt ggtatggtac
    11281 ggtagcttct ggcgcttgtt catgccgagg tcgcgcttct cgtcgaaggc gatctcgtgc
    11341 tggcccatca gctggatgcg cttgctgctg cggatgcgct ccagggtggc cgggatgatg
    11401 tccgggtcga tcaggttcgg ccgctggcct tccaggccga gcaggatcgc cttgtcggtg
    11461 ccgtggccgc ggccggtcag cgccagcgag ccatagacat ccgcgcggat gcgcgcgacc
    11521 tcgtgcaggc ggcccggatc gagcagccag cgatggatga atcgctcggc ggccttcatc
    11581 ggcccgacgg tgtgcgagga actcggacca atgccgatct tgaaaacgtc gaacgtgctg
    11641 acagccatgg atgccaaact gcgggtaccg gacaagccgc tattctaccg gcttgccggg
    11701 ccatgcgatg gctgcggcgc agcatttccg ccacgggagc cgaaccggtg ttgaccctga
    11761 tccagcgtga cgattgccac ctgtgcgacc tggccctggc cgaactggca aaggcgcggg
    11821 caccggagtt cgaatcggtg ttcctggacg accagcctgc gctggagacg cgctatggcg
    11881 cgcgggtacc ggtgctgcgc gacgaggcgg ggcagcgcga actggactgg ccgttcgatg
    11941 cggccaccgt gcaggcctgg ctggccgaat gcgatcaggt agtgccggcc gctggccggc
    12001 aaccacccga tatccgttaa tgccgggcag cgcccggcac taccgggatc gtcttatttc
    12061 gcgttgaact tcacgatcgt gctgatcgcg gtttcgtcgg ggatggtctt ggtgtcggcc
    12121 cagtcaccgc cgcccacgcc gaagtccagg cgcttcacgg tggccttgcc ggtcagcacc
    12181 ggctgggtgc ccggcttcca ggtgaaggtg agggtgaccg gcttgctgac gccgcgcagt
    12241 tccagggtgc catcggcggc gaactggtcg ttgcccaccg cgcggaagcc cttggcggta
    12301 tagcgtgcgg tggcgaactt gccgacgttg aagaagtcgg cggtctgcag ggtcgagtcg
    12361 cggtcgctgt tgccgctctt ggcaccggcc agcgggatca ccacgtccag cgagccggcg
    12421 gccgggttgg ccgggtcgaa gctgagcttg gtggcgaagc ccgggaagct gccggtgaac
    12481 acttcaccgt cgtacttggt ggcaaacacc aggatcgaac cggcaccggg ggcctgcgcg
    12541 tagtcggcgg cgagcaccgg ggcagtggcc agcatgccgg ccagggcggc ggccacggcg
    12601 gccggggtgg tcagtttcag ggtcatcggt cagtccttct gaggggaggc gagccagccg
    12661 cgcggcaaca tgcgggacaa cgttgcatcg cgctggaaca ggtggtggta gaaagcagcg
    12721 ccggcatggg ccagcaccac cgcgatcaac agccagaagc cgtattcgtg gatggcatgg
    12781 gacaccgcga caacctgagg gtcggggccg ctcagcttgg gtacgtcaac cagcccgaac
    12841 cagcggaacg ggcgcaggcc actggccgag tcgtacagcc agcccgacag cggaatggcg
    12901 aacatcagca catacaacag cacgtgggtt gcactggcga tgcgctcctg ccagctgggc
    12961 acacccggca ccggcttggg cgcgccggca tacaggcgcc agccgaggcg gaacagcacc
    13021 agcgccagca cggtgatgcc gatcgacttg tgcgcggtgt agacccagaa atacttcggg
    13081 gtcttgggca attcacccat ggtcaggccg accacgccca gggcgaggat cagcagtgca
    13141 atcaaccaat gcaggatctg gctgacactc ccccaggcgg cgggggtgtt cttggcggtc
    13201 atgaaaggtc ctctagcggg ccgtcttggg gtcggagtgc gggacgggag cgggagttcc
    13261 cggggcgtcg ctgcggtcga gagtggcctc agcctcgatc ctcagctgta cggcatcacc
    13321 gatgacgccc ggccaggcgg tgatgccgaa cgcgcgccgg ctcagcgtgg tgctggcgga
    13381 aaaaccggcg gtgcgtcgaa atgggggaag gggatagcgc ttgatggcat tgagcgtcac
    13441 ctccagcgtg atctcctggc tgaccccgcg cagggtgagg gtgccgatca cgtgggcacg
    13501 cttggcatcg atcggttcca cgcggctgga gacgaatcgc gcgttcggga atcgttcgcc
    13561 gtcgagcagg ctgcgggcca gcgtggcctg gttccacttg gcatcgccaa ggtccaatcg
    13621 cgacacgggt acctcgacgt ccagcgtggc ttcgcgccag ttgtcgggat cgaactgaag
    13681 gcggccttca ctgcccgaga ccgtgcccat ggcctgcgag taacccgcgt ggtcgatgct
    13741 gaacaacacc cgcgtatgca ccggatcgag gcggtaggtg tctgcatccg cccaggcggg
    13801 ggcggtggcg agcagcatcg gcagcagggc caggcaggaa cgcatcgatg gcgggctccg
    13861 gaagggggac gttgcgatca tacgcacagg cccctgccaa cgatgcgtgc atggctgcaa
    13921 cagttcgtgg tgccactgcc cgtggaaaca ggctgttgca gtcatgaacg cgggcctgtg
    13981 tgacaatcgg ggcaggacag ggggttcagg atgacgagca gctggcgcct gtggtggcga
    14041 ggcatcgcgg gattggggct gttgctgatg gcgttcgccg cagcggctgc gcccctggaa
    14101 atggcggaaa caccacgcct gcgccgtttc ggcgcggccg aaggcatgcc ctcgcgcatg
    14161 gtgttggcgc tggccgagga tcgccagggc cacgtctggg ccgccaccga tggcggcctg
    14221 gtgcgttacg acggtgccag cctgcgggtc tgggagcatg atccggaaca gccgggctcg
    14281 ctgccgggca atgagatcga gacgctgctg gtcgatccgc tggaccgcgt atgggtaggc
    14341 atcaacggca aggggctggc ccgcctggat gccgaccgtg agcgcttcag gaccttcgat
    14401 gcggtcaatg gcccatgcct gggccagttc tggacgctgg cctatgccga ggacgccttg
    14461 tggatcggca ccagcagcca agggatctgc cggttcggag aggacggcag cctgcgcttc
    14521 ttcaagcatg atcctgcgcg cgcggacggc ctgcccagca acaccatcta cagcagcctg
    14581 gtcgatgcgc gcggtcgcct gtggatcggc accgaggccg gcgtggcacg ctggaacggc
    14641 catgggttcg agccggtggc ggcgcgggag ctgggcacgt tgagcgtgct gcggatgagc
    14701 cgcgatgcgg atggctcgat ctggatcggc agccagaacg acggcctcta tcgcatcgat
    14761 gcgcaggacc gggtcagccg cccgcggtgg accgacagcg cccgcctgcg ttcggcactg
    14821 gtactggccg accgccaggg cggctactgg gcgggtacgt ccgacggtct gctgcgcgga
    14881 gatgccagtg cgttgtggcg gctcgacggc gaccgcggca gtggtttcct taccgcccag
    14941 agcggtgtgc tcgatctgct gcaggaccac gagggcggag tgtgggtggc gctgctgacc
    15001 caggggctgg cttacctgcc gccggactgg cgccgttttt cgatctggaa ccagctcgat
    15061 ggcaagccgt tggacagcca gtacctgctg agcgcggcca gcgacggcca ggcgtattac
    15121 gtgggctcgg cgcacggcgt gtaccagctg gatgcgcacg gcacgctgcg cctgctggcc
    15181 agcgaccgcc agattggcag tggcgcggtg tggtcggtgc tgccgcggcc ggacgggcgc
    15241 ctgtggctgg gccgagccgg ccgcatcagc gtgtacgacc cggccagccg cgcgctgcag
    15301 gactggcgga tcgacggtgg cgccgacctg cgccagcgta tcgatctgat gcggcaggcc
    15361 cccgatggca cggtctggct gtcggtgatg aacctgggcc tgcagcaacg cagcgccgat
    15421 ggccgggtgc tgcgcagcta tccgctggat gatttccgca aggcggccga ttcaccgatc
    15481 gaacagatcc gcttcgatgc ccatggcaag gcgtggatca tgggtgaaat gggcatctgg
    15541 cgcgagcagg cggggcgctt cgaggcggtg ccgggtgttt ccagcgggct gatcttcgac
    15601 ctggtgtggg tcgacccgca gcagctgtgg ctggcccggc aaggcgcgct cgaacgctac
    15661 cagtgggatg gcatgagcct gcgcctgatc cagcgcgttg atggaagtgc cggcgtgccg
    15721 ccggtgagca tgggcggact ggcattggcc gacgacggcc gggtgtgggc gaccacgccg
    15781 cgcggcctgt tgcgctggga tcccaaggcg cggcgactgc aactgttcaa tgaacgcgat
    15841 ggcctgtccg atgccgaatt caccagccgg cctccggcag tgaacgccga tggccgcgtc
    15901 ctcgccgtgg cccagaccgg cctggtcgcg ttcgatgtga atgccgttga cgtcgcgttg
    15961 cccgcgtcgt cgctggtgat tgccgaggtg cgcgtgcgcc gcgatgacgc gcgcggctgg
    16021 cagcccctgc cggacaccgg caccctgttg ctggggccgg atgatcgtga cctgcagatc
    16081 gacgcacgcc tgctgtcgta tgccaatccg cagggcaacc gctaccgctt ccgggtgcgc
    16141 ggctatgacc aggactgggt ggagcagggc ggggatggcc agcgtacgct gtcccggctg
    16201 cccaccggca gctacgtcat cgaagtgcag gcggccaccg ccaacggtgc atggacgcct
    16261 tcgcagcagt tgaaggtgaa ggtgctgccg ccgtggtggc gcagtggcat ggcgatcttc
    16321 ggctacatcc tgatcggttc actgctgctg ctcaccctgg cctggtcgat cagggggcgc
    16381 ctgcgccgtc gccagcagtg gcagttgacc gtgcacaagc aggaactggc cgagcaggct
    16441 tcgcaggcca agagccgctt cctggccacg ctgggccatg aggtacgcac gccgatgacc
    16501 ggtgtgctgg ggatgagcga gctgctgctg gccacgacgc tggacccggt gcagcgcagc
    16561 tatgccggct cgatccagca ggccgggagc cacctgttgc gactggtcaa cgatgcgctg
    16621 gacctcgccc gcatcgaggc cggccggctg gagctggacc tgcgtccgtt cgatctggcc
    16681 ggcctgctcg accaggtgca ggtgctgatg cagccgatgg ccaagcagcg caggctggat
    16741 ttccagcgtg gcaacgatcc gcagggtccg atcagcgtca gtggtgacga gatgcgggtg
    16801 cgccagatcc tgctcaacct gctgggcaac gcgatcaagt tcaccgagcg cggccatgtc
    16861 ggcctggccg tgcgcctgga ggacaacggc gggggcgtct gtttcgaggt gtacgacagc
    16921 gggccgggca tcaacgccga gcagcaggag cgcctgttcc accgtttcga gcaggccgat
    16981 ggcccacgca cggcctcgcg ctatggcggc agcgggctgg gccttgcgat ctgccaggag
    17041 ctggcggtgg cgatgggcgg gcgcatcgac gtggaaagct cgcccggcaa gggcgcgcgc
    17101 ttccgggtgc ggttgccgct gccctggacg cggcaggcgg ccgctgccgc aggtgacgtt
    17161 ccgtcgctgc cggtactgcc gccgctgcgc atcctgctgg tggaggacga tgccaccgtg
    17221 gccgaagtca tcgccggcct gctgcgcagc cgggggcatg acgtcgtgca cgtgctgcac
    17281 ggcctggggg ccttgtccga gatcgccacc gacggcttcg atgttggcct gctggacctc
    17341 gatctgccgg cattggacgg caccgcgatc gcccgccagc tgcgcgcgct gggctatgag
    17401 ctgccgctgg tggcggtgac cgcgcgttcc gacgcctatg ccgagtcgca ggttctcgcc
    17461 gcgggattcg atggtttcct gcgcaagccg gtcaccggcg acatgctggt ggcggcgatc
    17521 gtgcaggctc gtgccaagcg acaggacatg gcctgaaagc gccggagcca agcgtgaatg
    17581 acgcgacttt cggtttacca tgccgacgcc cgcagcgcgg gaatcatcag ggcagcgtga
    17641 ggaggcaatc ggtggcgtat ctgcgggcgg cgatgctgct gctgatcctc ctgtgtggcc
    17701 tgtcacccgc tgccgcgcag cctgtgcccc cgagtccgcg ccaggtgacg gtgttcgacg
    17761 gcctgccgtc caataccgtc aaccgcatgg ccgaagaccg ctacggctac ctgtggatcg
    17821 ccaccaacga cggcctggcc cgctacgacg ggcgcaacta ccggatctgg cgttcggagg
    17881 acggattgcg cgacaaccgg atctggacgg tgctggtcga tgcgcgcaac cagctctgga
    17941 tcgggaccga gaatgccggc ctggtgcgga tgtccgccga ccgccgccag ctgcacttct
    18001 acgaccgcag cagccagccg ctgatgggga ccaacacggt ctggagcctg gcggccacgc
    18061 cggacggttc ggtctggttc ggtacccacg agggagggtt gtaccggctg gacaaccagg
    18121 atcggctgca gcgcttcctg ccggaggcca acaatccgcg cagcctgccg gccgcatcgg
    18181 ttccgtatct ggcaaccctg gccgacggca gcctgtggat tggtaccaag catggcgtag
    18241 cgcgctggac cgggaccgac ttcgaacgtg tcggcagcga cgtcatcccc agcctgctga
    18301 tcaatggcct gaccgccgag cccgacggca gcctgtggat cagcacgatg gccggtgcca
    18361 ccgtgcgccg ccccgacggt cgcttcgaga ctccgccgtg gaagcttccg caaggggagc
    18421 aggtgttggg catgatgctg cgcgacgaac agggcggcta ctggctggac acccgaaccg
    18481 gcctcggccg tgcggtcgac ggccagtacc aggccgtgcc gttgtacagc gcggtggcgc
    18541 gtgggccggt acgaccgaac tggaccggtg cctacgaaga tcgtgagggt ggaatctggc
    18601 tggccagcac caatgccggg ctgtggcacc tgctgccccg ctggtggcag ttctcggtgc
    18661 tgtcacgctt ggaggacgac cccagctcgc tgcgcaacgc cttcgtcctg ggtaccagcc
    18721 cctccagcaa tggcggcatc tggacggtgg gcggccatgg tgcgctggat cggttcgacc
    18781 cgaagaccgg caaggtcgaa cagcaccgca cctgggtcaa tggcatgcac tggctgacct
    18841 cggtgcgcga ggatcgacgc ggccaggtct ggatcggttc gaacgatgca ctgctgcgct
    18901 atgacccgaa gctgcgcgat ctgcgccgct gggggcgtga tgccggtgcc gatgcgacca
    18961 tggaaggggt catcgaatcg atgatgacct gtgatggcga cagcctgtgg ctgatgctgc
    19021 cgtccggcct gcagcagcgc gacctggacg ggcgcctgcg ccgccagctg gacaatggcc
    19081 agcgcggcct gcagcagggg cagctcaacc tggatgtgga gtgcgggccg caggaccaca
    19141 tctggctggc cagcagccgc ggcctgctgc agtggttgcc ggaaagcgag cgcttccagc
    19201 cggtaccggg cgcccctgcg accgcgatcc atgcgctgca cgtaggccgc gatggccagg
    19261 tgtggttgtc cgaggatggc cggctgtcgc gctatcgctg gagccagggg cggctggaac
    19321 ggcaggcggt ggtcggcgcc gagcagggct atccggcgat ctccgcgtcg gggttggtgg
    19381 tcgacgcgca gggcgtggcg tgggccacca gtgcgcgcgg cctggtgcgg attggcgccg
    19441 acggccagag cgtgcgcctg tatggggtgc acgatggcct gcccagccag gaattccgcg
    19501 agcacaccct ggtgatgtca ggcgacggcc acctggtggc gggaacgcca gccggcgtgg
    19561 tggtgttcga tccggaactg gtgcggccat cggtgcggcg cgcgcccctg gtgatcgaac
    19621 gggtcgaggt gcgccgcaac gagcaggtgc tcgacctgac ccatgacacg ccgctgcaga
    19681 tcgtcgatgg tgatcgcgac ctgcgcatcg tcgcacggct gctgtcgttc gccgattcgg
    19741 cctccaatac ctatcgctac cgcctggccg gctacgatcc ggattgggtc gaagtcgggc
    19801 cggccggtga gcgcctgttc tcgcgcctgc ccccgggcag ttatcggctg gaagtgcagg
    19861 cacgctcggc cgaccatgtc tggtcgcggg tgcagagcct ggagttccgc gtgcagccgc
    19921 cgtggtggcg cagcctgtct ggcttgctgg tgctggcgtc catcgcgttg ctgctgacca
    19981 gctggttcgc ctggttgtac cggcgtcgcc tgcagcgtcg tcacgcctac cagctggcgt
    20041 tgcacaagca ggaactggcc gagcaggcct cggcggccaa gacccgtttc ctggccaacc
    20101 tcggccacga gatccgcacg ccgatgaccg gcgtgctggg catgagtgaa ctgctgctgg
    20161 cctcgccgct ggacccgcag cagcggggct acacgcaatc gatccggcat gccggcgaac
    20221 atctgctgca cctggtcaac gacgcgctgg acctggcgcg tatcgagtcc gggcgactgg
    20281 agctgcagca caaacccttc gcgctgagct gcctgctgca ggatctggcc gcgctgatgg
    20341 ggccgctggc tgcgcagaag gggctgcgct tcaccctcga caaccagctg ccgcccggcc
    20401 tgcaggccac cggcgatgcg atgcgggtgc ggcagatcct gctcaacctg ctctcgaacg
    20461 cggtcaagtt caccagccgt ggcaccatca cgctgcacgc gcgcagcgat ggtgagctgc
    20521 gcgcgctgca tttcgaggtg cgcgacaccg gtccgggcat cagccaggaa cagcagcagc
    20581 gcctgttccg gcgcttcgag caggccgacg gtgcacgtac cgccgcacag tacggtggta
    20641 gcggcctggg cctggcgatc tgccgcgaac tggcgcaggc gatgcagggg cgcatccagg
    20701 tggaaagcca gctgggccgc ggcacctgct tcggcgttac cctgccgttg ccgctggtgg
    20761 tcgatgccag tgccgaagcc gagggcggaa cgcatcgcga ggaggctgcg aacatgccac
    20821 cgctgcgggt gctcctggtc gaggacgacg cgaccgtggc cgacgtggtg cgcggcctgc
    20881 tgagcgcacg aggccacgaa gtggtacatg ccgggcatgc gctggcggcg ctgcgcgaga
    20941 tcagtgccgg cgatttcgac gtcggcctgc tcgatctgga cctgccgggc ctgagtggat
    21001 tcgagctggc ccagcacctg cgcaaccagg gctacatgct gccgctgctg gcggtgaccg
    21061 cgcgtaccga tccggatttg cagcagcagg ttgaagcggc aggtattggt ggcttcctgc
    21121 gcaagccggt caccggcgaa ctgctggtgg aagcgatcgc ccgggtgatg ggcaggtagg
    21181 gattcggcag ggcctgcggc cctgcacccg ccggatcaac gtcaacatca aaagcgtgca
    21241 ttccgtgg
//
LOCUS       DAOKIP010000052        20502 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.052,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000052 DAOKIP010000000
VERSION     DAOKIP010000052.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 20502)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20502)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20502
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.052"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            <1..1694
                     /locus_tag="QEL58_001667"
     CDS             <1..1694
                     /locus_tag="QEL58_001667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012479204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glutamine--tRNA ligase/YqeY domain fusion
                     protein"
                     /protein_id="HDS1676145.1"
                     /translation="DFIRQIVREDLASGKHQAIKTRFPPEPNGYLHIGHAKSICLNFG
                     IAGEFSGVCNLRFDDTNPAKEDPEYVAAIQDDVRWLGFEWNELRHASDYFQTYYLAAE
                     KLIEQGKAYVCDLSAEEVRAYRGTLTEPGRPSPWRDRSVEENLDLFRRMRAGEFPDGA
                     RTLRAKIDMASGNINLRDPALYRIKHVEHQNTGNAWPIYPMYDFAHALGDSIEGITHS
                     LCTLEFEDHRPLYDWCVDNVDFAHDDALTQPLVDAGLPREAAKPRQIEFSRLNINYTV
                     MSKRKLMALVTEQLVDGWEDPRMPTLQGLRRRGYTPAAMRLFAERVGISKQNSLIDFS
                     VLEGALREDLDSAAPRRMAVVDPVKLVLSNLPEGHEEQLTFSNHPKDESFGSRQVPFA
                     REVWIDREDFAEVPPKGWKRLVPGGEVRLRGAGIIRCDEVIKDADGTITELRGWLDPE
                     SRPGMEGANRKVKGTIHWVSAVHGVPAEIRLYDRLFSVPNPDDESEGKTYRDYLNPES
                     RRTVTGYVEPAAASAAPEQSFQFERTGYFVADRRDHTEAKPVFNRSVTLRDTWSA"
     gene            1738..2400
                     /locus_tag="QEL58_001668"
     CDS             1738..2400
                     /locus_tag="QEL58_001668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008268175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676146.1"
                     /translation="MITALSALLWFISQHPLLTFFAAMVLAGLVSWWRRFPGYAIVVF
                     PLAMLNIFLGHFLNATFLNAVGERGEAVIIKAEETNSTLNEQYIWRYEAVLRTAEGRD
                     VEVVFHTNTASLWPLENAIRIPAQDQPFVVKYTPGFPRNFVILTNESPHGIAQARASA
                     RERVEVAARKLHFSPGNADFRADYRRELETWLREHGNDPQQQPDARRYRAELDALDAI
                     DR"
     gene            2450..3172
                     /locus_tag="QEL58_001669"
     CDS             2450..3172
                     /locus_tag="QEL58_001669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676147.1"
                     /translation="MTTTSTALLPLLQQVLQEGGIACRVDAGALLLDGGLRLTPHAVA
                     ANERDNGGWQTSTVIETQHPVLFADGLFEYQHANGADEQASLLSGFQTWMRVDLATLQ
                     TAVGAADAQGLPMLGLTYPGAEEGEELQRTVVLGPLAHYRAQEVDASTCGEDDHGSCP
                     CCLFTRSMDAFDELLRARPFLAIRLFASRDAEGLCEADCRVNGHDFAAALPLLRAYAA
                     SWPQAGLEFRKQYVVIRTGSPG"
     gene            3270..3830
                     /locus_tag="QEL58_001670"
     CDS             3270..3830
                     /locus_tag="QEL58_001670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005415358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside deaminase"
                     /protein_id="HDS1676148.1"
                     /translation="MLYAQVHLTLPAWIHDQIDLDRRYPGDEAKVALAIELSRLNVEH
                     ASGGPFGAVVFGPDDKVIAAGVNRVMPHATSLAHAENMAYMLAQQRLQTPRLNAVLSP
                     VTLATSSQPCCQCYGATVWAGIDRLLIGANSADVEELTPFDEGPLPADWVGELNKRDI
                     EVVQGLNRDAARSVLRAYGESDGARY"
     gene            3814..4881
                     /gene="rlmM"
                     /locus_tag="QEL58_001671"
     CDS             3814..4881
                     /gene="rlmM"
                     /locus_tag="QEL58_001671"
                     /EC_number="2.1.1.186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019337028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (cytidine(2498)-2'-O)-methyltransferase
                     RlmM"
                     /protein_id="HDS1676149.1"
                     /translation="MAPVTETGIGLLCLCRQGFEPELAGELQFRAGEAGFAGYARTQR
                     NDGYVLFMCDDAAALAPRLRWRELIFARQKLLVLAELPQLDPADRITPMLEVLADAPR
                     FGDLWVEHPDSDAGKPLSGLARAFGNALRPALRKAGKLTDKPNNRLPRLHVVFVDGTH
                     AFVCIADPADSAPWALGIPRLKLLPEAPSRSALKLDEALLTLLTPEEREALARPGMRA
                     ADLGAAPGGWTWVLTRQHMHVLSIDNGPLRQHVLDTGLVEHLRADGFHWHPEQPLDWM
                     VCDMVEQPRRVAERMATWFREGWCRHAIFNLKLPMKKRWDETRLCLDLFQDQAGKPLV
                     VRAKQLYHDREEITVLASPLR"
     gene            4931..5326
                     /locus_tag="QEL58_001672"
     CDS             4931..5326
                     /locus_tag="QEL58_001672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005408148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EF-hand domain-containing protein"
                     /protein_id="HDS1676150.1"
                     /translation="MRYRSTPILIALLAAAPALAQQLPHTPAQSQPLGPTGGAIRQQA
                     LGAGRVTGSVEIAQPAGEAQVTVRSLEPSSVVGQYRIRFSDLDVNGDGFISREEAQAN
                     PALADEFNALDRKHRGKLDRADLAGWLVD"
     gene            complement(5397..6578)
                     /locus_tag="QEL58_001673"
     CDS             complement(5397..6578)
                     /locus_tag="QEL58_001673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UbiH/UbiF family hydroxylase"
                     /protein_id="HDS1676151.1"
                     /translation="MSRHARLDVTIVGGGVVGAACALALAEAGLSVALVEGREPAPWQ
                     AAQPDLRVFAFAADNVQLLNRLGVWPAIAQARAWPYRRMQVWDAAGGEDLLFDADRFG
                     RRELGYIVENGLLQDRLWAALPAAGVQLHCPARVETLEQDEAGVRLRLDDGRRLEAAL
                     AVAADGAESTLRRLAGIEVERHDYHQRGVVAYVDSELPNQATAWQRFLPTGPLALLPV
                     AEHRSSIVWTLPEDEAARVLALDEAAFNRELTRAFAARLGELRLASARAAFPLRRQLA
                     RHYVAGRVLALGDAAHVVHPLAGQGVNLGLRDVAALQQWLAPSTERRGQPRLSPQRLQ
                     RWARERRSDNHIAACSFDAINRLFSNDEMHLTLARGRALGCVGKWPPLVQAFWKRAAG
                     V"
     gene            complement(6575..7783)
                     /gene="ubiH"
                     /locus_tag="QEL58_001674"
                     /gene_synonym="visB"
     CDS             complement(6575..7783)
                     /gene="ubiH"
                     /locus_tag="QEL58_001674"
                     /gene_synonym="visB"
                     /EC_number="1.14.13.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005412303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-octaprenyl-6-methoxyphenyl hydroxylase"
                     /protein_id="HDS1676152.1"
                     /translation="MSERHDVLIVGGGLVGASLAIALERLGRDVGLLEASPAGELPAV
                     FDQRNLSFAAATVNALTALGVMQKLAMAPGPIRRIHVSRAGDFGRVQLDASDYDRPWF
                     GQVVVARDFGQALEARLQELPRLRRYRPMRFLGLGEVVDGYRQVRVADESGEHVLLAR
                     LVVGADGTASAVRGALGIEVDRHDFQQTLFVARVRSQRAPDGTAWERFTDTGPTALLP
                     RGDRHFGTVHGVARDQADAVMALDDAAWLQRLQHAIGWRAGRLLDSGPRSAYPLIQVL
                     ARALAGERAVLLGNAAQTIHPLGAQGFNLGLRDALTLAELLEDAHEDAGSDALLQAYV
                     ARREEDRRQTVAFSGGLARLTSNPAPLMRPLRSLGLVAAQRASVQSMLVGGAMGFRGE
                     VPRLCRGEAA"
     gene            7891..8475
                     /locus_tag="QEL58_001675"
     CDS             7891..8475
                     /locus_tag="QEL58_001675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004144564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676153.1"
                     /translation="MSDTANRAFVLSVLVLLLAATRVNHFAAIPDASWAVFFIGGFYL
                     ARWTRWAFPLLMVFAVLVDWIVIRSSGLDFWQHYCVSPGYWLLLPAYFSLWAGGMLLG
                     RNYQGARWPVLAKGALLLVASVAVCHLLAQGGFYWTSRNVAEPTLTGWAQNYAQWFGP
                     YLRTTAIYVALAAALQLAVEQFLKLQQARRDIRH"
     gene            8484..9038
                     /locus_tag="QEL58_001676"
     CDS             8484..9038
                     /locus_tag="QEL58_001676"
                     /EC_number="2.5.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cob(I)yrinic acid a,c-diamide
                     adenosyltransferase"
                     /protein_id="HDS1676154.1"
                     /translation="MGHRLSRIYTRTGDDGSTGLGDGQRVAKDDARVASFGTVDEANA
                     ALGLLLAASLPEDVRALVVHLQHQLFDLGAELCIPGHAAIHAADVSALEQQLDHYNAG
                     LPMLKEFILPAGGEAAARCHLARTIVRRAERETVALARREAVRSEALQYLNRLSDLLF
                     VLARVLARADGHGEALWQPQQRQR"
     gene            9048..9986
                     /locus_tag="QEL58_001677"
     CDS             9048..9986
                     /locus_tag="QEL58_001677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histone deacetylase family protein"
                     /protein_id="HDS1676155.1"
                     /translation="MLVYTHPSCLLHDPGPGHPECPQRLQHVLDALHAAFPGQLQWRQ
                     APPAKFGELTRVHDSSLLDFVLQPQTAPLRQLDMDTWTSPGSASAAVHAAGAGVAAVD
                     AVMLGEDTLAFCAVRPPGHHATSSTAMGFCLLNNIAIAAAYARDRHGLERIAVVDFDV
                     HHGNGTQDIFQHDARVSYYSTHQAGLFPNSGLRRDRGAGNLMNILLPPGSGGFRFRNV
                     WADEMLPAIDDFRPQLLLISAGFDAHLRDPQADLMLETDDFAWITGELHALARRHAAG
                     RVVSMLEGGYDLQALAECSVAHVRTLISGAGGTVAG"
     gene            10076..12574
                     /gene="lptD"
                     /locus_tag="QEL58_001678"
     CDS             10076..12574
                     /gene="lptD"
                     /locus_tag="QEL58_001678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS-assembly protein LptD"
                     /protein_id="HDS1676156.1"
                     /translation="MRRALRLLPLPLSIAISLPAMADDKPLNWGLCPATDVIPAFTDA
                     PTPVPGQDKAAAAAAREQQSTDIEGDQLLGTTTVPQYEGNVALRRGDQFVGTDKLSFD
                     TETGNYIADGNVRYQDGSIRMIAKRAEGNQESDTHKISDIKYQLVSRRGNGDAESVDL
                     QGAVGQMHRSTYTTCDPSQPVWKLSAPQIEVDNDEGFGTARNAVLRIGNVPVLWAPYF
                     KFPIDDRRKTGLLFPQLGMSGRNGVDYAQPIYFNLAPNYDDTLTPRYMSQRGLLLDNE
                     FRYLYKGGRGDVLTSFIPNDKLRDRDRGRVMFTGYHNVNNNWQTRANLAWVSDERYVE
                     DFANRLVGVTASSLQSSIGLYGTGQTWTAGIMADRWQLTDYTLDESSLPYNRQPRLYF
                     NWDKPVLPWLEAGIYSEAVRFTHDDINYKYGPEVGPDLQYTRNGRQRTSGIGVGGGSR
                     LDVKPYVSFPISGAAWYVTPTLAYRYTAYQLDRSLVDGANGIRGQILRSQGIDPATAT
                     PEQLRGNTSPSRSLPIASLDAGLFFDRETRIGGKSFLQTLEPRLFYLRTPYRNQEELP
                     IFDTRDFTFSWGQLFRDSRYTGADRQNDANQLTLALGTRFIDQTTGKERFSAAIGQIQ
                     YFDESRVTLPGGAPVEKGKSAWIADGNYMINDRWTLGATYQWDPKYKREDLASVRARY
                     LMPNDGVVNLSYRYRINAGAAANANKHDRTLLEQADLSFLYPLNARWSVVGRYYYSLQ
                     DKEPLEIIAGVQWDSCCLAVRAVARRYVRNREGDMNNSIQLEFVLKGLSSIGQDTDRT
                     LRRAILGYNRDDLYLVPPSNTGATRDDYDPNQIP"
     gene            12571..13914
                     /locus_tag="QEL58_001679"
     CDS             12571..13914
                     /locus_tag="QEL58_001679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005415349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HDS1676157.1"
                     /translation="MTKRFPVLLASLLAVSSVSAPLQVLAQEAQPLDRIAAVVDEDVI
                     LQSELQRAIANIKAQYTGRENQLPPEDVLSRQVLERLVLVKLQVARAQSSGIRIGDQE
                     LNQAMNAIAQQNGSTLDALRQRLAHDGIDFNDFRASVRDEITVQRLRQSFAQSRISVS
                     EGEVDAALKQQATVGNQYHLAHILIALPDGANADQIATGQKKADGVKTLLDKGELDFN
                     AAAVRYSDSPNALEGGDLGWRSLDEIPQAFAQMMEKMKPGEVVGPIRGPSGFQLLKLV
                     DVRDASATAGASTVTEYHGRHILVRVDDHQTDAAAKAKIDTLRARIAGGADFETVAKE
                     SSEDNNSKGQGGDLGWFPADAFGPAFGQQVSGIQDGGISQPFRTDAGWHIVQRVATRQ
                     TDVTNDNQRAQVRETIGRRKLEDEYNRFLQELRGEAYVSFRSGDRAENTATPPQS"
     gene            13918..14898
                     /gene="pdxA"
                     /locus_tag="QEL58_001680"
     CDS             13918..14898
                     /gene="pdxA"
                     /locus_tag="QEL58_001680"
                     /EC_number="1.1.1.262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxythreonine-4-phosphate dehydrogenase
                     PdxA"
                     /protein_id="HDS1676158.1"
                     /translation="MRPELALVPGEPAGIGPELCVRLAQQPREDSRLLAFGDPDTLRA
                     AAAALNLPLQLLPEDAEARVPGDLRLRVVANAVPSRFGHADPANASAVIHALLGAGRA
                     CLSGELHGVVTGPVHKAVINEGGIAYSGTTELLADQAGVKVVMMLANPIVRVALATTH
                     LPLREVADAITAPGLEHTLRTVHAALRREFAVPAPRIAVLGLNPHAGEDGHLGREELD
                     LVIPLLQRLRAEGMDLVGPLPADTAFLPAKLVGFDTVLAMYHDQGLPVLKYSGFEQAV
                     NLTLGLPYPRVAVDHGTALDLAGRGIADPSSLQAATTLCAQLARQRTLSA"
     gene            14895..15698
                     /gene="rsmA"
                     /locus_tag="QEL58_001681"
     CDS             14895..15698
                     /gene="rsmA"
                     /locus_tag="QEL58_001681"
                     /EC_number="2.1.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005408139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (adenine(1518)-N(6)/adenine(1519)-N(6))-
                     dimethyltransferase RsmA"
                     /protein_id="HDS1676159.1"
                     /translation="MNSPHSPSGPVFTAPAKKQLGQHFLADRHYIDKIVMAVNPKDGD
                     RLVEIGPGQGAITLPLLRVHPKLTVIEFDRDLIAPLTAAAEPLGELTIVHRDVLRVDF
                     TELAAGQPIRLVGNLPYNISSPILFHALEHAAVVRDMHFMLQKEVVDRMAAGPGSKVY
                     GRLSVMLQAYCQVTSLFVVPPGAFRPPPKVDSAVVRLVPRDPASIGINDHRRFAEVVK
                     AAFGQRRKTLRNALNNVVSAEQFIAAGVRPDARAEQLDVAEFVALANAS"
     gene            15712..16095
                     /gene="apaG"
                     /locus_tag="QEL58_001682"
     CDS             15712..16095
                     /gene="apaG"
                     /locus_tag="QEL58_001682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006451488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Co2+/Mg2+ efflux protein ApaG"
                     /protein_id="HDS1676160.1"
                     /translation="MEDADVYAISVEVAPRFLDDQSAPEDGRFAFAYTIRIHNQGRVA
                     ARLVARHWRITDANGRVEHVDGDGVIGEQPRLRPGEDFRYTSGVMLGTDHGTMQGHYD
                     MVADDGTEFAAPVAPFVLAVPRTLH"
     gene            16111..17136
                     /locus_tag="QEL58_001683"
     CDS             16111..17136
                     /locus_tag="QEL58_001683"
                     /EC_number="3.6.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010481833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="symmetrical bis(5'-nucleosyl)-tetraphosphatase"
                     /protein_id="HDS1676161.1"
                     /translation="MSVWAIGDLQGCYDVTQRLLEKIRFDPAQDTLWFCGDLVNRGGQ
                     SLETLRLVHSLREHSVVVLGNHDLSLLAVGARTEEEQRKVNPDLLRIVQAEDRDELLD
                     WLRLQKLVHVDRELGWMMVHAGLAPKWTTQMAEKHAAEVEVQLHGAGYRKLFRNMYGD
                     KPSWAPNLSGYDRSRAIINVLTRMRYCTPRGRIGIEDKGTPGTQEQGLYPWFEVPGRV
                     ERDLKVVCGHWSALGLTITQGVHAIDTGAVWGGKLTALQLDTDELRVVQVPGRDVPAP
                     VANARPPARPAHERPAASAQGKEQGGGTPAGNPGTRGPRRRRRRGGGGGGGGSAGPGN
                     SGAPPQA"
     gene            17133..17786
                     /locus_tag="QEL58_001684"
     CDS             17133..17786
                     /locus_tag="QEL58_001684"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008264761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1287 domain-containing protein"
                     /protein_id="HDS1676162.1"
                     /translation="MMRPGRAPGTVLLLTLALASGCQPGSPPAPTAAQDAAATPAPSQ
                     APSPPLVAAARAQIGVTVRYDPAYQVLAYPGGDVAPDRGVCTDVVVRALRSQGLDLQA
                     RVHEDMRSDFSAYPAIWGLSRPDRNIDHRRVPNLMRWFERQGWQRAITALATDYAAGD
                     IVAWKLNGNGLLHVGIVSDRRLANGTPLVLHNIARGTREENLLFQHAIIGHYRMPAP"
     gene            complement(17864..18355)
                     /locus_tag="QEL58_001685"
     CDS             complement(17864..18355)
                     /locus_tag="QEL58_001685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017157316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase"
                     /protein_id="HDS1676163.1"
                     /translation="MKLSMIVALDRNRGIGQGNAMPWHLPDDFKHFKALTLGKPILMG
                     RKTAESIGRVLPGRTNLVLTRSGQVPFEGMRAVASLDEAKAIAEGEGASELCIIGGGE
                     IFRQLLDQASDLHLTWVDAEVPADTHFPEVDAHDWQQVSSEPHPADERHAYAFRFVHY
                     VRR"
     gene            complement(18361..19155)
                     /locus_tag="QEL58_001686"
     CDS             complement(18361..19155)
                     /locus_tag="QEL58_001686"
                     /EC_number="2.1.1.45"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011260172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thymidylate synthase"
                     /protein_id="HDS1676164.1"
                     /translation="MKSYLDLLSHVLEHGAEKSDRTGTGTRSVFGWQMRFNLNDGFPL
                     VTTKKLHLRSIIHELLWFLKGDTNIGYLKDNQVRIWDEWADENGDLGPVYGKQWRSWA
                     TADGGAIDQMQWLVDEIKRNPDSRRLVVSAWNVGELSQMALMPCHNLFQFYVVDGKLS
                     CQLYQRSGDIFLGVPFNIASYALLTHMVAQATGLGVGDFVHTLGDAHLYSNHFEQARE
                     QLSREPRALPTLWLNPDVTDLFGFQFDDIRIDGYDPHPSIKAPVAV"
     gene            complement(19152..20039)
                     /locus_tag="QEL58_001687"
     CDS             complement(19152..20039)
                     /locus_tag="QEL58_001687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016945080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase"
                     /protein_id="HDS1676165.1"
                     /translation="MIYFHDIDPIALSLGPIKVHWYGIMYLLGFTAAWLLGRKRIADG
                     RLPGVDANGFSDLLFYAMLGVVLGGRIGYMLFYALGDFLHNPLLLFKVWDGGMSFHGG
                     LLGVLGACWWWSRKHTLHFFDTMDFMAPLVPLGLGFGRIGNFIGAELWGKYTDGSWGV
                     VFPSGLPAPLNQLDHATLQAQFASGALNQFARHPSQLYEAFLEGLVMFVVLWTVSAKP
                     RHRYLVGGLFALMYGLFRFAVEFVRMPDNGVYVAFDWLTRGQILSLPLIAFGLVLLAM
                     SRRAPVLQPQLPVAAEGKA"
     gene            complement(20091..>20502)
                     /locus_tag="QEL58_001688"
     CDS             complement(20091..>20502)
                     /locus_tag="QEL58_001688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014036030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TPM domain-containing protein"
                     /protein_id="HDS1676166.1"
                     /translation="AIAAGEQRHGGQVMFAVEADLPLDALWRKVTPRQAAEHAFARLR
                     TWDTAHNNGVLIYLLLADHAIEIVADRGLHGRISPAQWQRVCTHLREGLRGPNPVEAL
                     RGAIEEVSTLVEGHFPAATRSDDDGLPNTPQLLG"
BASE COUNT         3443 a         7300 c         6661 g         3098 t
ORIGIN      
        1 gcgatttcat ccgccagatc gtgcgcgagg acctggccag cggaaagcac caggcgatca
       61 agacccgctt cccgcccgag ccgaacggct acctgcacat cggccatgcc aagtcgatct
      121 gcctgaactt cggcatcgcc ggtgagttca gcggtgtctg caacctgcgc ttcgacgaca
      181 ccaacccggc caaggaagat ccggaatacg tggccgcgat ccaggacgac gtgcgctggc
      241 tgggcttcga gtggaacgag ctgcgccacg cctcggacta cttccagacc tactacctgg
      301 ccgccgagaa gctgatcgag cagggcaagg cctatgtctg cgacctgtcg gccgaggaag
      361 tgcgcgccta ccgtggcacc ctgaccgagc cgggccgccc gtcgccgtgg cgcgaccgca
      421 gcgtcgagga gaacctcgac ctgttccgcc gcatgcgcgc cggtgaattc ccggatggtg
      481 cgcgcaccct gcgcgccaag atcgacatgg ccagcggcaa catcaacctg cgcgatccgg
      541 ccctgtaccg catcaagcac gtcgaacacc agaacaccgg caatgcgtgg ccgatctacc
      601 cgatgtacga cttcgcgcac gcgctgggcg attcgatcga gggcatcacc cactcgttgt
      661 gcacgctgga attcgaagac caccgcccgc tgtacgactg gtgcgtggac aacgtggatt
      721 tcgcccatga cgacgcgctg acccagccgc tggtcgacgc cggcctgccg cgcgaagcgg
      781 ccaagccgcg ccagatcgag ttctcgcgcc tgaacatcaa ctacacggtg atgagcaagc
      841 gcaagctgat ggcgctggtc accgaacagc tggtggacgg ctgggaagac ccgcgcatgc
      901 cgaccctgca gggcctgcgc cgccgtggct acaccccggc ggcgatgcgc ctgttcgccg
      961 agcgcgtggg catcagcaag cagaattcgc tgatcgactt cagcgtgctg gaaggcgcgc
     1021 tgcgcgaaga cctggacagc gccgcgccgc gccgcatggc cgtggtcgac ccggtcaagc
     1081 tggtgctgag caacctgccc gaaggccacg aagagcagct gaccttcagc aaccatccga
     1141 aggacgaaag cttcggcagc cgccaggtgc cgttcgcacg cgaagtgtgg atcgatcgcg
     1201 aggacttcgc cgaagtgccg ccgaagggct ggaagcgcct ggttccgggt ggcgaagtac
     1261 gcctgcgcgg cgccggcatc atccgctgcg atgaggtgat caaggatgcc gacggcacca
     1321 tcaccgagct gcgcggctgg ctggatccgg aatcgcgccc gggcatggaa ggcgccaacc
     1381 gcaaggtcaa gggcaccatc cactgggtca gcgccgtgca tggcgtgccg gccgagatcc
     1441 gcctgtacga ccgcctgttc tcggtgccga acccggacga cgaatcggaa ggcaagacct
     1501 atcgcgatta cctcaacccg gaatcgcgcc gcaccgtcac cggctatgtc gagccggccg
     1561 cggccagcgc tgccccggag cagtcgttcc agttcgaacg taccggctac ttcgttgccg
     1621 accgccgcga ccacaccgag gccaagccgg tgttcaaccg cagcgtgacc ctgcgcgaca
     1681 cctggtcggc ctgaggacct gcgcgggcgc cagcacggcg cccgcacgcc cgcgacgatg
     1741 atcaccgccc tgtccgccct gctctggttc atctcgcagc atccgctgct gacgttcttt
     1801 gcagcgatgg tgctggccgg gctggtctcg tggtggcggc gctttccggg ctacgccatc
     1861 gtggtgttcc cgctggcgat gctcaacatc ttcctcggcc acttcctcaa cgccaccttc
     1921 ctcaatgcgg tcggcgagcg tggtgaagcg gtgatcatca aggccgagga aaccaactcc
     1981 accctcaacg aacagtacat ctggcgctac gaagcggtgc tgcgtaccgc cgagggccgt
     2041 gacgtggagg tggtgttcca taccaacacc gcctcgttgt ggccactgga gaacgcgatc
     2101 cgcattccgg cgcaggacca gcccttcgtg gtgaagtaca ccccgggctt cccgcgcaac
     2161 ttcgtcatcc tcaccaacga atcaccgcac ggcattgccc aggcccgggc cagcgcgcgc
     2221 gaacgcgtgg aagtggccgc acgcaagctg catttcagcc cgggcaacgc cgatttccgc
     2281 gcagactatc gccgcgagct ggagacctgg ttgcgcgagc atggcaatga tccgcagcag
     2341 cagcccgacg cacggcgtta tcgcgccgaa ctcgacgcac tcgacgcaat cgatcgctag
     2401 accccaggca cggcctggat gttccacccc atccatccac aggcctgaca tgaccacaac
     2461 ttccaccgca ctcctcccgc tgctgcagca ggtgctgcag gaaggcggta tcgcctgccg
     2521 cgtcgacgct ggcgcgctgc tgctggacgg tggcctgcgc ctgaccccgc atgccgtggc
     2581 cgcgaatgaa cgcgacaacg gtggctggca gacctccacc gtcatcgaga cccagcaccc
     2641 tgtgctgttc gccgacggcc tgttcgagta ccagcacgcc aacggcgccg acgaacaggc
     2701 atcgctgctg tccggcttcc agacctggat gcgggtggac ctggcgaccc tgcagaccgc
     2761 cgtcggcgcc gcagacgcgc agggcctgcc gatgctgggc ctgacctatc cgggcgccga
     2821 ggaaggcgaa gaactgcagc gcaccgtggt gctggggccg ctggcgcact accgcgcaca
     2881 ggaggtggat gcctccacct gcggcgagga cgaccacggt tcctgcccgt gctgcctgtt
     2941 cacccgcagc atggacgcct tcgacgagct gctgagggcg cgcccgttcc tggccatccg
     3001 cctgttcgcc tcgcgcgacg ccgagggcct gtgcgaagcc gattgccggg tcaacggcca
     3061 cgatttcgcc gctgccctgc ccctgctgcg cgcctatgcc gccagctggc cacaggccgg
     3121 gctggagttc cgcaagcagt acgtggtgat ccgcaccggc tcgccgggct gacccaccgc
     3181 cacacccggt acaggccgct gcggctacac tgcgcgccgg tttcccaagc aaccgcacct
     3241 tcttccatcc cacacgaggc acccccgcga tgctgtacgc gcaagtccac ctgacccttc
     3301 ccgcctggat ccacgaccag atcgacctgg atcgtcgata tcccggcgat gaggccaagg
     3361 tcgcgctggc gatcgagctg tcgcggttga acgtcgagca cgccagtggc ggcccgttcg
     3421 gtgcggtggt gttcggcccg gatgacaagg tgatcgccgc cggcgtgaac cgggtgatgc
     3481 cgcacgcgac ctcgctggcg cacgccgaga acatggccta catgctggcc cagcagcgcc
     3541 tgcagacccc gcgcctgaac gcggtgctgt cgccggtcac cctggccacc agctcgcagc
     3601 cgtgctgcca gtgctacggc gccacggtgt gggccggcat cgaccgcctg ctgatcggcg
     3661 ccaactcggc cgacgtcgag gagctgaccc cgttcgatga aggcccgctg ccggccgact
     3721 gggtcggtga gctcaacaag cgcgacatcg aagtggtgca gggcctgaac cgcgatgctg
     3781 cgcgcagcgt gctgcgtgcc tatggggaaa gcgatggcgc ccgttactga gaccggaatc
     3841 ggcctgctgt gcctgtgccg gcagggcttc gagcccgaac tggccggcga gctgcagttc
     3901 cgcgcgggcg aagccggttt cgccggctat gcccgcaccc agcgcaatga cggctacgtg
     3961 cttttcatgt gcgacgacgc cgctgcattg gcaccgcgcc tgcgctggcg cgagctgatc
     4021 ttcgcgcggc agaaactgct ggtactggcc gagctgccgc agctggatcc ggccgaccgc
     4081 atcacgccga tgctggaggt gctggccgat gcgccgcgct tcggcgacct gtgggtggag
     4141 catcccgact cggatgcggg caagccgctg tccggtctgg cgcgtgcctt cggcaacgcg
     4201 ctgcgcccgg cgctgcgcaa ggccggcaag ctgaccgaca aaccgaacaa ccgcctgcca
     4261 cgcctgcacg tggtgttcgt cgatggcacc cacgccttcg tctgcatcgc cgacccggcc
     4321 gacagcgcac cgtgggcgct gggcattccg cgcctgaagc tgctgcccga agccccctcg
     4381 cgttcagcgc tgaagctgga tgaagcactg ttgaccctgc tgacgccgga agaacgcgag
     4441 gcactggcca ggccgggcat gcgcgcggcc gaccttggcg ccgcacccgg cggctggacc
     4501 tgggtgctga cccgccagca catgcacgtg ctgagcatcg acaacggccc gctacgccag
     4561 catgtactgg ataccggact ggtcgagcac ctgcgcgccg atggtttcca ctggcacccg
     4621 gagcagccgc tggactggat ggtctgcgac atggtcgagc agccgcgccg cgtggccgag
     4681 cgcatggcca cctggttccg cgaaggctgg tgccggcacg cgatcttcaa cctgaagctg
     4741 ccgatgaaga agcgctggga cgagacccgg ctgtgcctgg acctgttcca ggaccaggcc
     4801 ggcaagccgc tggtggtgcg cgccaagcag ctgtaccacg accgcgaaga gatcaccgta
     4861 ctggcttcgc cgctgcgctg aggccatcgt gcccgccggg catggcccgg cgctaccgag
     4921 ggatgcaacc atgcgatacc gctcgactcc gatactgatc gccctgctgg cggcggcgcc
     4981 tgcccttgcc cagcagttgc cgcatacgcc cgcgcagagc caaccgctcg gcccgaccgg
     5041 tggcgcgatc cgccagcaag cgctgggcgc cggccgggtc accggcagcg tggagattgc
     5101 acagccggcc ggcgaagcgc aggtgaccgt acgttcgctg gagccgagca gcgtggtcgg
     5161 ccagtaccgc atccgcttca gcgacctgga cgtgaacggc gatggcttca tcagccgcga
     5221 ggaagcacag gccaacccgg cattggccga cgagttcaac gcgctggacc gcaagcaccg
     5281 cggcaagctc gaccgcgccg acctggccgg ttggctggtg gattgaaaaa agggacggag
     5341 gggattaagt cgtttgtgcc acaaacgact taatcccctc cgtccccttt tttgcgtcag
     5401 acgccggcgg cgcgcttcca gaatgcctgc accagcggcg gccatttgcc gacgcagccc
     5461 agcgcgcggc cacgggccag agtcaggtgc atctcatcat tggagaacag gcgattgatc
     5521 gcgtcgaagc tgcaggcggc gatgtgattg tcgctgcgac gttcgcgggc ccagcgctgc
     5581 agccgctgcg gtgaaaggcg cggctggccg cggcgctccg tcgaaggcgc cagccactgc
     5641 tgcagggcgg cgacatcgcg caggcccagg ttcacgccct gcccggccag cggatgcacg
     5701 acatgcgcgg catcgcccag cgccagtacg cgaccagcga catagtggcg agcgagctga
     5761 cggcgcagcg ggaacgccgc acgtgccgag gccagccgca gttcgcccag gcgggcggca
     5821 aaggcgcggg tcagttcccg attgaacgcg gcttcgtcca gggccagcac gcgagcggct
     5881 tcatcctccg gaagggtcca gacaatcgaa ctgcggtgct cggccaccgg cagcagcgcc
     5941 agcggcccgg tcggcaggaa gcgctgccag gccgtggcct ggttcggcag ttcactgtcc
     6001 acgtaggcca ccacgccacg ctggtggtag tcatgccgct cgacctcgat cccggccagc
     6061 cggcgcaggg tcgattcggc gccgtcagcg gccaccgcca gcgccgcttc caggcgacgg
     6121 ccgtcgtcga ggcgcaggcg cacgccggcc tcgtcctgct ccagcgtctc cacccgcgcc
     6181 gggcaatgca gctgcacgcc cgcggccggc agcgccgccc acaggcgatc ctgcagcagg
     6241 ccgttctcga cgatgtaacc caactcgcgc cgaccgaagc ggtccgcgtc gaacaacaga
     6301 tcctcaccac ctgccgcatc ccacacctgc atgcgccgat agggccacgc gcgggcctgc
     6361 gcgatggcag gccacacgcc cagccggttc aacagctgca cattgtcagc ggcgaaggca
     6421 aacacccgca ggtccggctg cgcagcctgc cagggcgccg gttcacggcc ttccaccagt
     6481 gcgaccgaga gcccggcttc ggccagtgcc agcgcgcagg ccgcacccac cacgccgcca
     6541 ccgacgatgg tcacatccag acgcgcgtgc cggctcatgc ggcttctccg cggcacagcc
     6601 gaggcacttc gccgcggaag cccatcgcgc caccgaccag catcgactgc accgaggcgc
     6661 gttgcgcggc caccaggccg aggctgcgca gcggtcgcat cagcggtgcc gggttgctgg
     6721 tcagccgcgc caggccaccg gagaacgcca ccgtctgccg gcggtcctcc tcacggcgcg
     6781 cgacataggc ctgcagcaat gcgtcactgc cggcgtcctc atgcgcatcc tccagcagct
     6841 cggccagggt cagcgcatcg cgcaggccca ggttgaagcc ctgtgcgccc aacgggtgga
     6901 tggtctgtgc ggcattgccg agcagcaccg cgcgctcacc ggccagcgcg cgcgccagca
     6961 cctggatcaa tggataggca ctgcgcgggc cggagtcgag caggcggccg gcgcgccagc
     7021 cgatcgcgtg ctgcagtcgc tgcagccagg cggcatcatc cagcgccatc accgcgtcgg
     7081 cctggtcgcg cgcaacacca tgcacggtgc cgaagtggcg gtcgccgcgc ggcagcagcg
     7141 cggtcgggcc ggtatcggtg aagcgctccc acgccgtgcc atccggcgcg cgctggctgc
     7201 gcacgcgggc gacaaacagc gtctgctgga aatcatggcg gtcgacctcg atccccagcg
     7261 caccgcgcac ggcactggcg gtgccatcgg caccgaccac cagccgggcc agcagcacgt
     7321 gttcgccgct ctcatcggcc acccgcacct ggcgatagcc atcgaccacc tcgcccagcc
     7381 ccaggaaacg catcggccgg taacggcgca gccgcggcag ctcctgcagc cgagcctcca
     7441 gcgcctggcc gaaatcgcgc gcgaccacca cctggccgaa ccagggccgg tcatagtcac
     7501 tggcgtcaag ctgcacgcgg ccgaaatcac cggcgcggct gacatggatg cggcggatcg
     7561 gtcccggcgc catcgccagc ttctgcatca cgcccagcgc agtcagcgcg ttgacggtgg
     7621 ccgcggcgaa actgaggttg cgctggtcga acaccgccgg cagttcaccg gcgggactgg
     7681 cctcgagcag gcctacgtcg cggcccaggc gctccagggc aatggccagg ctggcgccga
     7741 ccaggccgcc tccgacgatc agcacgtcat gtcgttcact catgcgttca tgatacgcgc
     7801 tcgtcccgac tgtacgccga acgggacgac gcctgcgcca tcccgtgcgg cgggctagaa
     7861 tgaaacctga atccgccccg ggcccccacc atgtccgaca ctgccaaccg cgccttcgtc
     7921 ctgtccgtac ttgtactgct gctggcggcg acccgggtca atcacttcgc ggccattccc
     7981 gatgcctcct gggccgtgtt cttcatcggc ggcttctatc tggcgcgctg gacgcgctgg
     8041 gcgttcccgc tgctgatggt gttcgcggtg ctggtcgact ggatcgtgat ccgcagcagc
     8101 ggcctggatt tctggcagca ctactgcgtg tcgccgggct actggctgct gctgcccgcg
     8161 tatttctcgc tgtgggccgg cggcatgctg cttggccgca actaccaggg cgcgcgctgg
     8221 ccggtgctgg ccaagggcgc gctgctgctg gtcgcctcgg tggcggtctg ccatctgctg
     8281 gcgcagggcg gcttctactg gaccagccgc aacgtggccg aaccgaccct gaccggctgg
     8341 gcgcagaact acgcgcagtg gttcgggccg tacctgcgca ccaccgcgat ctacgtggcg
     8401 ctggccgccg ccctgcagct ggccgtggag cagttcctca agctccagca ggcccgccgc
     8461 gacatccgcc actgagccgc gccatgggcc atcgcctctc gcgcatctac acccgcaccg
     8521 gcgacgacgg cagcaccggc ctcggcgacg gccagcgcgt ggccaaggat gacgcacgcg
     8581 ttgcctcctt cggcacggtc gacgaggcca atgcggcgct cggcctgctg ctggcggcat
     8641 cgctgcccga ggacgtgcgg gcgctggtcg tgcacctgca gcaccagttg ttcgacctgg
     8701 gtgccgagct gtgcatcccc ggccacgccg cgatccatgc cgccgatgtc tcggcgctgg
     8761 aacagcagct ggaccactac aacgccggcc tgccgatgct gaaggaattc atcctgccgg
     8821 ccgggggcga agctgccgcg cgctgccacc tggcgcgcac catcgtccgt cgcgccgagc
     8881 gcgagaccgt cgccctggcc cgccgcgagg cggtgcgcag cgaggcactg cagtacctca
     8941 accggctgtc ggacctgctg ttcgtgctgg cccgggtgct ggcccgtgcc gatggccacg
     9001 gcgaggcgct gtggcagcca cagcagcgcc agcgctgagt cggcacgatg ctggtctata
     9061 cccatccgtc ctgcctgctg catgaccccg gccccgggca cccggagtgc ccgcaacgcc
     9121 tgcagcatgt gctcgatgcc ctgcatgcgg cctttcccgg ccagctgcag tggcgccaag
     9181 cccctccggc caagttcggc gaactgaccc gggtgcatga cagttccctg ctcgacttcg
     9241 tgctgcagcc acagactgcc ccgctgcgcc agctggacat ggacacctgg acctcgccgg
     9301 gatcggccag cgccgccgtg catgccgctg gtgccggcgt ggccgcagtc gatgcggtga
     9361 tgctcggcga ggatacgctg gccttctgcg ccgtgcggcc gcccggtcac cacgccacca
     9421 gcagcacggc gatgggcttc tgcctgctca acaacatcgc catcgccgct gcctatgccc
     9481 gcgaccgcca cggcctggaa cgcattgccg tggtcgactt cgacgtgcac cacggcaacg
     9541 gcacccagga catcttccag cacgatgccc gggtctcgta ctacagcacc caccaagccg
     9601 ggctgttccc caattcgggc ctgcgccgcg accgtggcgc cggcaacctg atgaacatcc
     9661 tgctgccgcc cggaagtggc ggattccgct tccgcaatgt ctgggccgac gagatgctgc
     9721 cggccatcga tgacttccgc ccgcagctgc tgctgatctc ggccggcttc gatgcgcacc
     9781 tgcgggaccc gcaggccgat ctgatgctgg aaaccgacga tttcgcctgg atcaccggcg
     9841 agctgcatgc gctggcacgc cgccacgcgg ccggccgggt ggtttcgatg ctggaggggg
     9901 gctacgacct gcaggcactg gccgaatgca gcgtggcgca tgtccggacc ctgatttcag
     9961 gcgccggtgg taccgttgcc ggatgaaccc gaaccggcag tctccaccgc ccttcattgc
    10021 ccctatgcaa gggatggggc aagctaccgt ccgttttcgc ccgaatccga accgcgtgcg
    10081 ccgagccctc cgactgcttc ccctgcctct gagcatcgcc atcagcctgc cggcgatggc
    10141 cgacgacaag ccgctcaact ggggcctgtg cccggccacc gacgtgattc ccgcgttcac
    10201 tgacgccccc acccctgtcc ccggccagga caaggccgcg gccgcggccg cccgcgagca
    10261 gcagtcgacc gacatcgagg gcgaccagct gctgggcacc accaccgtgc cgcagtacga
    10321 gggcaacgtg gccctgcgcc gtggcgatca gttcgtcggc accgacaagc tcagcttcga
    10381 taccgagacc ggcaactaca tcgccgacgg caatgtccgc taccaggacg ggtcgatccg
    10441 gatgatcgcc aagcgtgccg agggcaacca ggaaagcgac acccacaaga tctccgacat
    10501 caagtaccag ctggtgtcgc gccgtggcaa cggtgacgcc gaatcggtcg acctgcaggg
    10561 tgcggtcggc cagatgcacc gctccaccta caccacctgc gacccctcgc agccggtatg
    10621 gaagctgtcc gcgccgcaga tcgaggtgga caacgacgaa ggcttcggca ccgcccgcaa
    10681 cgccgtgctg cgtatcggca atgtgccggt gctgtgggcg ccttacttca agttcccgat
    10741 cgatgaccgc cgcaagaccg gcctgctgtt cccgcagctg ggcatgtccg gccgcaacgg
    10801 tgtcgactat gcgcagccga tctacttcaa tctggcgccg aactacgacg ataccctgac
    10861 cccgcgctac atgagccagc gcgggctgct gctcgacaac gaattccgct acctctacaa
    10921 aggtggccgc ggggacgtgc tgacctcgtt cattcccaac gacaagctgc gcgaccgcga
    10981 ccgcggccgg gtgatgttca ccggctacca caacgtgaac aacaactggc aaacccgcgc
    11041 caacctggcc tgggtcagcg acgagcgcta tgtcgaggac ttcgccaatc gcctggtcgg
    11101 tgtgaccgcc tccagcctgc agagcagcat cggattgtat ggcaccggcc agacctggac
    11161 ggccgggatc atggccgacc gctggcagct gaccgattac accctcgacg aaagctccct
    11221 gccctacaac cgccagcccc gcctgtactt caactgggac aagccggtgc tgccgtggct
    11281 ggaagccggc atctactccg aagccgtgcg gttcacccac gacgatatca actacaagta
    11341 cggtcccgag gtcggcccgg acctgcagta cacccgcaat ggccggcagc ggacatccgg
    11401 catcggcgtc ggtggtggct cacgcctgga cgtgaaaccg tacgtgtcgt tcccgatcag
    11461 cggcgcggcc tggtacgtca cgcccaccct ggcctaccgc tacaccgctt accagctgga
    11521 ccgcagcctg gtggacggcg ccaacggcat ccgtgggcag atcctgcgct cgcagggcat
    11581 cgatccggcc accgccacgc cggagcagct gcgtggcaac acctcgccga gccgaagcct
    11641 gccgatcgcc agcctcgatg ccggcctgtt cttcgatcgc gaaacccgta tcggcggcaa
    11701 gtcgttcctg cagaccctgg aaccgcgcct gttctacctg cgcacgccgt accgcaacca
    11761 ggaagaattg ccaatcttcg atacccgtga cttcaccttc agctggggcc agctgttccg
    11821 cgattcgcgc tacaccggcg ccgatcgcca gaacgatgcc aaccagctga ccctggcgct
    11881 gggcacccgg ttcatcgacc agaccaccgg caaggaacgg ttctcggccg ccatcggcca
    11941 gatccagtac ttcgacgagt cgcgggtgac gctcccgggc ggtgcgccgg ttgaaaaggg
    12001 caagtcggcc tggatcgccg acggcaacta catgatcaac gatcgctgga ccctgggcgc
    12061 cacctaccag tgggacccga agtacaagcg cgaggacctg gccagcgtcc gtgcccgcta
    12121 cctgatgccc aacgacggcg tggtcaacct cagctatcgc taccgcatca atgccggtgc
    12181 cgcggccaac gccaacaagc atgaccggac cctgctggag caggccgacc tgtcgttcct
    12241 gtacccgctg aatgcgcgct ggagcgtggt tggccgttac tactactccc tgcaggacaa
    12301 ggaaccgctg gaaatcatcg ccggcgtgca gtgggacagc tgctgcctgg ccgtgcgcgc
    12361 tgttgcccgc cgctacgtgc gcaaccgcga aggcgacatg aacaactcca tccagctgga
    12421 gttcgtgctc aagggcctga gctccatcgg ccaggacacg gaccgtaccc tgcgccgtgc
    12481 tatcctcggc tacaaccgcg acgacctcta tctggtgccg cccagcaaca ccggggcgac
    12541 ccgcgatgac tacgatccga atcagatccc atgaccaagc gcttccccgt tcttctcgcc
    12601 tcgctgctgg cggtgtccag cgtgtccgcc cccctgcagg tgcttgccca ggaggcgcag
    12661 ccgcttgacc gcatcgccgc cgtcgtcgat gaggacgtga tcctgcagag cgagctccag
    12721 cgtgcgatcg ccaacatcaa ggcgcagtac accggccgtg aaaaccagct gccgccggaa
    12781 gacgtgctca gccgccaggt gctcgagcgg ctggtgctgg tcaagctgca ggtggcccgc
    12841 gcccagagca gcggtatccg catcggcgac caggagctga accaggcgat gaatgccatc
    12901 gcccagcaga atggctcgac cctggacgcc ctgcgccagc gcctggccca tgacggtatc
    12961 gacttcaacg acttccgggc ttcggtgcgc gatgaaatca ccgtgcagcg cctgcgccag
    13021 agcttcgcgc agagccgtat cagcgtcagc gagggcgagg tcgatgccgc gctgaagcag
    13081 caggccacgg tgggcaacca gtaccacctg gcgcacatcc tgatcgccct gcccgacggc
    13141 gccaatgccg accagatcgc caccggccag aagaaggccg acggcgtgaa gaccctgctg
    13201 gacaagggcg agctggactt caacgccgcc gccgtccgct attcggacag ccccaacgcg
    13261 ctggaaggcg gcgatctggg ctggcgcagc ctggatgaaa tcccgcaggc gttcgcgcag
    13321 atgatggaaa agatgaagcc cggtgaagtg gtgggcccga tccgcggccc cagcggcttc
    13381 cagctgttga agctggtgga cgtgcgtgat gccagtgcca cggccggcgc gagcacggtc
    13441 accgagtacc acggccgcca catcctggtg cgcgtggacg atcaccagac cgacgccgcc
    13501 gccaaggcca agatcgatac cctgcgcgcc cgcattgccg gtggcgcgga tttcgagacg
    13561 gtggccaagg agtcctccga ggacaacaac agcaagggtc agggtggcga tctgggctgg
    13621 ttcccggccg acgccttcgg tccggcgttc ggccagcagg tctccggcat ccaggacggc
    13681 ggcatcagcc agccgttccg taccgatgcc ggctggcaca tcgtgcagcg cgtagccacc
    13741 cgccagaccg acgtgaccaa cgacaaccag cgtgcccagg tccgcgagac catcggccgc
    13801 cgcaagctgg aagacgagta caaccgcttc ctgcaggaac tgcgtggcga agcctacgtg
    13861 agcttccgca gcggcgaccg cgcggaaaac accgccacgc cgccgcagtc ctgaccgatg
    13921 cgccccgagc tcgctctggt accgggcgag cccgccggga tcggcccgga gctgtgtgtc
    13981 cgactggccc agcagccgcg tgaagacagc cggctgctgg ccttcggcga tccggacacc
    14041 ctgcgcgcgg cggcagccgc gctgaacctg cccctgcagc tcttgcccga ggatgccgaa
    14101 gcccgcgtcc ccggtgatct gcgcctgcgc gtggtcgcca atgccgtgcc cagccggttt
    14161 ggccacgccg acccggccaa cgccagcgcg gtcattcacg cacttctcgg cgcgggccga
    14221 gcctgcctca gcggcgaact gcacggcgtg gtcaccggcc cggtgcacaa ggcggtcatc
    14281 aacgaaggcg gcatcgccta cagcggcacc accgaactgc tggccgacca ggccggggta
    14341 aaggtggtga tgatgctggc caaccccatc gtgcgcgtag ccctggccac cacccacctg
    14401 ccgctgcgcg aggtggccga tgcgatcacc gcacccggcc tggaacacac cctgcgcacc
    14461 gtgcatgccg cactgcggcg cgagttcgcc gtgcctgcac cgcgcattgc cgtgctcggc
    14521 ctgaacccgc acgccggtga agacggccac ctgggccgcg aggaactgga cctggtgatt
    14581 ccgctgctgc agcgcctgcg cgctgaaggc atggacctgg tcgggccgct gcccgccgac
    14641 accgccttcc tgccggccaa gctggtcggc ttcgacaccg tgctggccat gtaccacgac
    14701 cagggcctgc cggtgctgaa gtactcgggc ttcgaacagg cagtgaacct gaccctgggc
    14761 ctgccctatc cgcgcgtggc ggtggaccat ggcaccgcat tggacctggc cggccgcggc
    14821 atcgccgatc cctccagcct gcaggcggca acgacgctgt gtgcgcagct ggcgcggcaa
    14881 cgtacactga gcgcatgaat tccccgcatt ccccctccgg cccggtgttc accgccccgg
    14941 ccaagaagca gcttggccag catttcctgg ccgatcgcca ctacatcgac aagatcgtga
    15001 tggcggtcaa tccgaaagac ggcgaccgcc tggtcgagat cggtcccggc cagggcgcga
    15061 tcacgctgcc gctgctgcgc gtgcatccga agctgacggt gatcgagttc gaccgcgacc
    15121 tgatcgcgcc gctgaccgcc gccgccgagc cgctgggcga gctgaccatc gtccatcgcg
    15181 acgtgctgcg cgtggacttc accgagctgg ccgccggcca gccgatccgc ctggtcggca
    15241 acctgcccta caacatctcc tcgccgatcc tgttccatgc gctggaacat gccgcagtgg
    15301 tccgcgacat gcacttcatg ctgcagaagg aagtggtcga ccgcatggcc gccggccccg
    15361 gcagcaaggt ctatggccgc ctcagcgtga tgctgcaggc gtactgccag gtgacctcgc
    15421 tgttcgtggt gccgccgggc gccttccggc cgccgccgaa ggtcgattcg gccgtggtgc
    15481 ggctggtgcc gcgcgatccg gccagcatcg gcatcaacga tcacaggcgc tttgccgagg
    15541 tggtcaaggc cgccttcggg cagcgccgca agaccctgcg caatgcgctg aacaacgtgg
    15601 tgtccgccga gcagttcatc gccgccggcg tgcgtcccga tgcccgcgcc gaacagctgg
    15661 acgtggccga attcgtcgct ctggccaatg cctcctgatt acactgccgg tatggaagac
    15721 gctgacgttt atgccatctc cgtcgaagtc gcgccgcgct tcctcgacga tcaatccgca
    15781 ccggaagacg gtcgctttgc gttcgcctat acgatccgca tccacaacca gggacgggtg
    15841 gccgcacgcc tggtcgcacg ccattggcgc atcaccgatg ccaatggccg cgtcgagcat
    15901 gtcgatggcg acggggtgat cggcgagcag ccgcggctgc gccccggtga agacttccgt
    15961 tacacctccg gtgtcatgct ggggaccgat cacggcacca tgcagggaca ctacgacatg
    16021 gtcgccgacg atggcaccga attcgccgcg ccggtcgcac cgttcgtgct ggccgtcccg
    16081 cgtaccctgc actgacaagg aggccgaacg atgagtgtgt gggcgatcgg cgacctgcag
    16141 ggctgctatg acgtcaccca gcgactgctg gagaagatcc gcttcgaccc ggcgcaggac
    16201 accctgtggt tctgcggcga tctggtcaac cgcggtggcc agtcactgga aacgctgcgg
    16261 ctggtgcatt cgctgcgcga gcacagcgtg gtggtgctgg gcaaccatga tctttcgctg
    16321 ctggccgtcg gtgcgcgcac cgaagaggag cagcgcaagg tcaacccgga cctgctgcgc
    16381 atcgtgcagg ccgaggaccg cgatgaactg ctggactggc tgcgcctgca gaagctggtg
    16441 cacgtggacc gcgagttggg ctggatgatg gtgcacgccg gcctggcgcc gaagtggacc
    16501 acgcagatgg ccgagaaaca tgcggccgaa gtcgaggtgc agttgcacgg tgccggctac
    16561 cgcaagctgt tccgcaacat gtacggcgac aagccgagct gggcaccgaa cctgtccggc
    16621 tatgaccgct cgcgcgcgat catcaatgtg ctcacccgca tgcgctactg caccccgcgt
    16681 gggcgcatcg gcattgagga caagggcacg ccgggcaccc aggaacaggg gttgtacccc
    16741 tggttcgaag tgccgggccg ggtcgagcgc gacctgaagg tcgtctgcgg ccactggtcc
    16801 gcgctgggcc tgaccatcac ccagggcgtg cacgccatcg acaccggtgc ggtgtggggc
    16861 gggaagttga ccgcgctgca gctcgatacc gatgagctgc gcgtggtgca ggtgccgggc
    16921 cgcgatgtgc cggcccccgt tgccaatgcc cgccctccgg cgcgaccggc acacgagcgt
    16981 cctgccgctt cggcacaggg caaggaacag ggcggtggca cacccgctgg taacccgggc
    17041 acccgcggcc cgcgccgtcg tcgccgtcgt ggcggcggtg gtggtggtgg tggctctgca
    17101 ggccccggca acagcggcgc cccgccgcag gcatgatgcg accgggccgg gcaccaggga
    17161 cggtgctgct gctgacgctg gcgctggcca gcggctgcca gcccggttcg cctcctgctc
    17221 ccacggccgc gcaggacgcc gcagccacgc cggcaccatc gcaggcgcct tcgccaccac
    17281 tggtggccgc agcgcgcgcg cagatcggcg tcaccgtccg ctacgacccg gcctaccagg
    17341 tgctggccta tcccggtggt gacgtcgcgc ccgatcgtgg cgtgtgcacc gacgtagtgg
    17401 tgcgcgccct gcgcagccag ggcctggacc tacaggcacg cgtgcacgag gacatgcgta
    17461 gcgacttcag cgcctatccg gcgatctggg gcctgtcacg ccccgaccgc aacatcgatc
    17521 atcgtcgcgt acccaacctg atgcgctggt tcgagcgcca gggttggcag cgagcgatca
    17581 ccgccctcgc caccgactat gcggccggcg acatcgtcgc ctggaagctc aacggcaacg
    17641 gcctgctgca tgtaggcatc gtctccgacc ggcggctggc caatggcact ccgctggtgc
    17701 tgcacaacat cgcgcgcggc acgcgcgaag agaacctgct gttccagcac gcgatcatcg
    17761 ggcattaccg gatgccggct ccgtagagtc gagcttgctc gactatgccc tgtgtatcca
    17821 ccaagagcag tcgagcaagc tcgactctac aggtgcgttg cgatcagcgg cgcacgtaat
    17881 gcacgaagcg gaacgcgtag gcgtggcgtt cgtcagccgg gtgcggttcg ctgctcactt
    17941 gctgccagtc gtgcgcatcc acctcgggga aatgggtgtc ggccggcact tcggcatcga
    18001 cccaggtcag gtgcaggtca ctggcctggt cgagcagctg gcggaagatc tcgccccccc
    18061 cgatgatgca cagctcgctc gcgccctcgc cttcggcaat cgccttggcc tcgtccagcg
    18121 acgccaccgc gcgcatgcct tcaaatggca cctggccgct gcgggtcagc accaggttgg
    18181 tccgccccgg cagcacgcgg ccgatcgatt cggcggtctt gcgccccatc aggatcggct
    18241 tgcccagggt cagcgccttg aagtgtttga agtcgtccgg caagtgccag ggcatggcat
    18301 tgccctggcc gatgccacgg ttgcggtcca gcgcgacgat catcgacagc ttcatcgggc
    18361 tcacaccgcc accggcgcct tgatcgacgg atgcgggtcg tagccgtcga tgcggatatc
    18421 gtcgaactgg aagccgaaca ggtcggtcac gtccgggttc aaccacagcg tcggcagcgc
    18481 gcgcggctca cgcgacagct gctcgcgggc ctgctcgaaa tggttcgagt acaggtgcgc
    18541 gtcacccagc gtatgcacga aatcgcccac gcccaggccg gtggcctgcg ccaccatgtg
    18601 ggtcagcagc gcatagctgg caatgttgaa cggcacgccg aggaagatgt cgccgctgcg
    18661 ctggtacagc tggcagctga gcttgccgtc caccacgtag aactggaaca ggttgtggca
    18721 cggcatcagc gccatctgcg agagctcgcc cacgttccag gcgctgacca ccagccggcg
    18781 cgaatcgggg ttgcgcttga tctcgtccac cagccactgc atctggtcga tcgcaccgcc
    18841 atcggcggtg gcccagctgc gccactgctt gccgtacacc gggccgagat cgccgttctc
    18901 gtcggcccac tcgtcccaga tgcgcacctg gttgtccttc aggtagccga tgttggtatc
    18961 gcccttcagg aaccacagca gctcgtggat gatcgagcgc aggtgcagct tcttggtggt
    19021 gaccagcggg aagccgtcgt tgaggttgaa gcgcatctgc cagccgaaca cgctgcgggt
    19081 gccggtgccg gtgcgatcgc tcttctccgc accgtgttcc agcacatgcg agagcaggtc
    19141 caggtaggac ttcatgcctt accctcggca gccaccggca gctgcggctg cagtacgggc
    19201 gcgcggcgcg acattgccag cagcaccagg ccgaaggcga tcagcggcag gctgaggatc
    19261 tggccacgag tcagccagtc gaaggccacg tagacgccgt tgtcaggcat gcgcacgaac
    19321 tcgacggcga agcggaacag gccgtacatc agcgcgaaca ggccaccgac cagatagcgg
    19381 tggcgcggct tggccgacac cgtccacagc accacgaaca tcaccagccc ttccaggaag
    19441 gcttcataca gctgcgaggg atggcgggcg aactggttca gcgcgccgct ggcgaactgc
    19501 gcctgcaggg tcgcgtggtc cagctggttc agcggcgccg gcaggccgga cgggaacacc
    19561 acgccccagc tgccgtcggt gtacttgccc cacagctcgg caccgatgaa gttgccgatg
    19621 cggccgaagc ccaggcccag cggcaccagc ggcgccatga agtccatggt gtcgaagaag
    19681 tgcagcgtgt gcttgcgcga ccaccaccag caggcgccga gcacgcccag caggccgccg
    19741 tggaagctca tgccgccatc ccacaccttg aacagcagca gcgggttgtg caggaaatcg
    19801 cccagcgcgt agaacagcat gtagccgatg cgcccgccca gcaccacgcc gagcatggcg
    19861 tagaacagca ggtcggagaa gccgttggca tcaacgcccg gcaggcgccc gtcggcaatg
    19921 cgcttgcggc ccagcagcca ggcagcagtg aagccgagca ggtacatgat gccgtaccag
    19981 tgcaccttga tcggccccag cgagagggcg atggggtcga tgtcgtggaa atagatcatg
    20041 gaaggtgcct tgcggttgaa cgcctattct cgggccagtg ccgccccggc tcaaccaagg
    20101 agctgcgggg tgttgggcag gccgtcatcg tctgaccgcg tcgcggccgg aaagtgccct
    20161 tccaccaggg tcgaaacctc ttcgatggcg ccgcgcagcg cctcgaccgg gttcgggccg
    20221 cgcaggccct cgcgcagatg ggtacagacc cgctgccact gcgccggact gatcctgccg
    20281 tgcaggccac ggtcagcgac gatctcgatc gcgtggtcgg ccagcagcag gtagatcagc
    20341 acgccgttgt tgtgggcggt atcccaggtg cgcaggcggg cgaaggcatg ttcggcggcc
    20401 tggcgcgggg tgaccttgcg ccacagcgcg tccagcggca ggtcggcctc cacggcgaac
    20461 atcacctgcc cgccgtggcg ctgctcaccg gcggcgatgg cc
//
LOCUS       DAOKIP010000053        20477 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.053,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000053 DAOKIP010000000
VERSION     DAOKIP010000053.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 20477)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20477)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20477
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.053"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(110..901)
                     /locus_tag="QEL58_001689"
     CDS             complement(110..901)
                     /locus_tag="QEL58_001689"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014038898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDS1676167.1"
                     /translation="MSTTELTDGQRNRVALMTIVRREVARIMRIWGQTLVPPAITMTL
                     YFLIFGNLIGSRVGDMGGYTYMQFIVPGLVMMSVIQNSYGNISSSFFGAKFGRHVEEL
                     LVSPMPNWVILWGYVAGAVLRGLMVGVIVLIIAMFFTPVRIPHPIVMLTTVILGATIF
                     SLAGFINAVYAKKFDDVAIVPTFILTPLTYLGGVFYSVKLLPGWAEAATHANPIFYMV
                     NAFRYGLLGSSDVPLPMAYGLMIGFVVVLTALALWLLRRGVGMRS"
     gene            complement(898..1866)
                     /locus_tag="QEL58_001690"
     CDS             complement(898..1866)
                     /locus_tag="QEL58_001690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDS1676168.1"
                     /translation="MGAKASSLASQNETAPALRVRDLRKTYDNGTQALKGVSLEVAPG
                     DFFALLGPNGAGKSTLIGIISSLVNLSEGQVEVFGSDLVRNRSATMRLIGLVPQEINF
                     NLFEKPFDILVNYAGFYGVPREEAEQRAEEELKRAHLWEKAQVMSRTLSGGMKRRLMI
                     ARAMMTRPRLLILDEPTAGVDIEIRRDMWRVLKEINAAGTTIILTTHYLEEAEYLCRH
                     LAIINHGQIVEQGPMRALLAKLDVEGFLLDIDGELPAQLPVIEGATLTAPDPHTLDID
                     MPRAMDLNRVFATLNEAGIRVRSMRTKSNRLEELFVRLTGNLETSA"
     gene            1952..2701
                     /locus_tag="QEL58_001691"
     CDS             1952..2701
                     /locus_tag="QEL58_001691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin--NADP reductase"
                     /protein_id="HDS1676169.1"
                     /translation="MPVQFPLKLVGRRMLAPTVGHYQFVRDDGQPLDFQPGQFIQVHF
                     SYADGTETKRSYSLATIHDHALGPGEAVDIAVSFVPGGAATALFEALEDGGQVSASGP
                     YGRFCLNPGDHNGRYLLIATGTGVTPYRSMLPLLETAMAERGVQIVLLQGARSPGELL
                     YSEDFYSFAEKHPNFRYVPCLSRELPADPHPDVQHGYVQQALAGFTPDPATDIAYLCG
                     NPDMVDACAELLKAAGLGNPQIRREKYVSSK"
     gene            complement(2791..3954)
                     /locus_tag="QEL58_001692"
     CDS             complement(2791..3954)
                     /locus_tag="QEL58_001692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010482247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic polysaccharide monooxygenase"
                     /protein_id="HDS1676170.1"
                     /translation="MHLSHRAVLALSVIAGVAASGSAVAHGTMSKPSSRVYSCYQGNP
                     ENPTNPACAAAKAIGGAQPFYDWAGINQANANGNHQAVVPDGELCSGGNSKYRGLDLN
                     RTDWQTSPIRADARGRYTFEFKAPAPHATRDWKFYVTREGWQPGSPLRWADLQEFCTL
                     GNVPLSGDVYKLDCPLPKRSGQHVIYNTWQRSDSTEAFYTCMDVRFEDGGGVTPPPQW
                     QDAGPVTARGALEVGTTLTLRVFNGNGNDLERPEITLAAGQTGATQWPLALARKVNAS
                     AQHARVGVLKNGVITPVASATENRVYLTPGHLFQLDTRMPDPDPVDPPPGDYDFVYPA
                     GIGSYIPGQTVVKGTDGKLYACRPFPEGAWCNVNAEAYRPGTGSAWRDAWIEY"
     gene            complement(4136..5308)
                     /locus_tag="QEL58_001693"
     CDS             complement(4136..5308)
                     /locus_tag="QEL58_001693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008267196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic polysaccharide monooxygenase"
                     /protein_id="HDS1676171.1"
                     /translation="MSFRSTPLLLTTSFAAAGLALAGTAFAHGTMTTPVSRVYACFQG
                     NPENPTNPACAAAKAVGGSQAFYDWNGINQASANGNHQAVVPDGKLCSGNNPTFRGLD
                     LDRSDWQTTPIQPDANGKFTFVFKATAPHATRDWRFFVTRDGWQPGSPLRWADLQEFC
                     TLGNTPLSADGTYKLQCTLPQRSGQHVIYNTWQRSDSTEAFYTCMDVRFEGNGGGGTP
                     VPQWQDAGPVTARGELPVGTTLALRVFNANGNDVERVETTLASGQTAPAQWPLALARK
                     VNASAQHARVGVLSNGVITPAASATGNRVYLKNGNRFQLDTQLPDPGTPSPGGDFDHV
                     YPAGIGSYVPGQTVVKGSDGKLYACRPFPEGAWCNVNADAYRPGVGAAWRDAWIAY"
     gene            complement(5542..6027)
                     /locus_tag="QEL58_001694"
     CDS             complement(5542..6027)
                     /locus_tag="QEL58_001694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008264789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1203 domain-containing protein"
                     /protein_id="HDS1676172.1"
                     /translation="MHAWYLGGLDHRPFQHLFEKNDTALATLGIQRRWAGDGGGHPCR
                     ISLSDPPSGSELLLLSHVHLPLHSPYHASGPIFVQRGVTRCVLPPGVVPPYVQRRMIS
                     VRAYDRSALMLGAQVCAGSDVAAQLDALFANAAVAFVQLHNAAHGCFSCQADRVDAQA
                     A"
     gene            6183..7385
                     /locus_tag="QEL58_001695"
     CDS             6183..7385
                     /locus_tag="QEL58_001695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019336746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HDS1676173.1"
                     /translation="MSLDFPTITVLGFLLCIGIAVGFSLLLVVLRGQPVLRQWTISLW
                     LLTLGVTLLALRPYLPLAPAVLAGNAAMAGCGLMMLRGVALHLQQPLPLWRPLLMAAA
                     FMACIFAFLVLWPDLHMRLQVFSVFALIVDGWIAWLLLRHAPAQQRTSCRLAAVVFLA
                     EATLYAVRLFLPVAPDAGEDIMRTGSPMFVTYIAGVMLELARCFAMVLLLVERMLVDL
                     RHAARTDGLTGLLNRSAVLADGQAQLQRVRQQGRPLALLLVDVDHFKQINDRWGHLAG
                     DQVLRHFSAVLQHCTQGKTHLLGRYGGEEFVLVLAGSTSSDAATLAAMIRTRLQRHPA
                     VLATGPVAVTASVGLAMDEGQGDLSTLLAAADAALYQAKAAGRDQLACAPAAAISPFP
                     IAAEAVPV"
     gene            7454..8980
                     /locus_tag="QEL58_001696"
     CDS             7454..8980
                     /locus_tag="QEL58_001696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014038891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HDS1676174.1"
                     /translation="MQRHHLALAGMLASLMLAGCSQPPSADTQGASDAPSRRFGAIDF
                     QPCTLSTEGASANVEAQCATLQVPEDRAHPGGRQIDLRIAWLESGSSGAGQPDPVFFL
                     AGGPGQAASEVAVIVDSALRQVRKQRDVFLIDQRGTGGSNPLSCLGADGKELQMDEDA
                     APTEASLRDYAQRCAASLQGRADARFYTTAEAIADLNAVRQALGVDRLNLVGGSYGTR
                     VAQRYAIAYPQHTRSLVIDGVVPNDLVVGGEFARTFDNAITLQSAQCRKDAVCSKRFP
                     VDTREQLRAVAETLRRAPVTVDYRDPGTNAPRQDVLTPDSVVGLAFAFSYVPEYSSLL
                     PLVLDEAAQGRYAPLASLVRGATRSMDFQINRGMQWSVICSEDAPRFQAPAESDDALF
                     GAEAARAFFAACPVWPHQPASAALTAPLKSDLPVLLLSGELDPVTPPRYAEQVLKGLP
                     NGRALVARGQGHGTLNAGCMPRLLGQFIDTTDAKALDASCLDTLSYVPAFTSFNGWTP
                     "
     gene            8977..9723
                     /locus_tag="QEL58_001697"
     CDS             8977..9723
                     /locus_tag="QEL58_001697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011039041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HDS1676175.1"
                     /translation="MIVADNLHKAFDTRTGRIQAVSNVGFRAADGQITGLLGPNGAGK
                     TTTMRMLYTLMTPDQGSISVDGIDAARDPVEVRRHLGVLPDARGVYKRLTARENIAYF
                     GELHGLSAQRIRERIEVLSHALDMGDILDRQTDGFSQGQRTKTAIARALVHDPRNVIL
                     DEPTNGLDVMTTRALRRFLLGLREEGRCVILSSHIMQEVGALCDHIVIIAKGTVMAAG
                     SADELRAQSGESNLEDAFVKLIGSEEGLHA"
     gene            9720..10904
                     /locus_tag="QEL58_001698"
     CDS             9720..10904
                     /locus_tag="QEL58_001698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017915440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDS1676176.1"
                     /translation="MSMMSTLMTVMRKELRDLSRDRRTLALTLLFGPLLYPLLILGMG
                     KLSESRVRTQIEQPLQIPTIGAEHAPNLVRFLAAQGLNATAAPKDLAEAIRSQEIDVA
                     LRISPEFGSNWADGKPALVEVIRDSTRRAAEVPTARLQAALATYNGQVGALRLMARGI
                     DAQVARPLDMASQDMASAEAKRGLMLSALLPILLTLTSFLGGAYLVMDTTAGERERQS
                     LEPLLATPGSRSAIVSGKIAAACMVGFASLLLTLIAFKVSAQIAPGNIGRQLNMNIMA
                     MVQMLLVMLPMLLIGTSLLTFLAAAAKSMKEAQSHMTWLMLLPMLPGYALIAYPVKSQ
                     LWQYAVPFLSQNQMLLKVIRHETITPSVWAIYLGASLGLAAVLWFAAVRRYHNERLAI
                     SS"
     gene            complement(10930..11640)
                     /locus_tag="QEL58_001699"
     CDS             complement(10930..11640)
                     /locus_tag="QEL58_001699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006400927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HDS1676177.1"
                     /translation="MPRQARLMLAGQPYHVTQRGVNKGAIFVDDSDRQLFLHLLHNAF
                     VKHHVALHAYVLMGNHVHLLATPSTHLGLANAMRMQGNSYVQAFNQRHARSGPLWQGR
                     FHSSMVDSDSYLLSVYRYIELNPVRAGMTTDPEDHPWSSVHGNLQRRDDPMLTEHPAF
                     HALASERIQRAKLYARFLHDLDAPADLPAIRAHSAGQHPLGENAFLRMVEQTLGRSVV
                     LRKRGRPRKAGTGEAETT"
     gene            complement(11741..12538)
                     /locus_tag="QEL58_001700"
     CDS             complement(11741..12538)
                     /locus_tag="QEL58_001700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012512431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDS1676178.1"
                     /translation="MSDQTSTALFDPALADAADGPVVWAAQLRLHVPRRTSRHHHARG
                     QLLGAHQGLLRIDVGHLHWLLPAGHIAWIPPSLPHALVSAERFDGWSLYFSAEACLGL
                     PVTPRILQPNALLKAATARALQWPHPPLDAVQTRLAGVIADEIAASTPLPLALAQPRD
                     RRLRRIAAALTRAPYDNRSIEAWAIASGLSSRSLARRWLAETGMTLSRWRQRLRVLLA
                     LPQLLAGEPVISVALSMGYDTPGAFISVFKREMGVTPARYGKGDGGN"
     gene            12616..12870
                     /locus_tag="QEL58_001701"
     CDS             12616..12870
                     /locus_tag="QEL58_001701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019336741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676179.1"
                     /translation="MQPQDILPDHQNDVQINGLTVRKGSVGAFLASARDWQDPAGDPA
                     IRAAAEADLRALLPGLHALGLFQVLAARDPALQRLIDGVA"
     gene            complement(12953..13954)
                     /locus_tag="QEL58_001702"
     CDS             complement(12953..13954)
                     /locus_tag="QEL58_001702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HDS1676180.1"
                     /translation="MSHVSMITAARRWLPVALALALAACSGKEEAPASAPDKAPAAAA
                     PAAPVVAAKVQSMGTEQLRESASQALRENRMYAPAGDNAIEYYLALRDKTPDDASVKS
                     ALTDLLPYTLIAAEQHLAREDYTEAQRLVALIEKVDASAPALPRLKEGLAKGVQNAAK
                     RTEAEAEKAKKDAEDRSKQQTEQQRLTEQRAKEADAAKQIAAQQDAARRDNERQEAER
                     QAAARREAEQKQQQAAAQQASAARQAAAPAAPTLRPVSTPAPRYPGEALRSGTSGEVL
                     VEITVGTDGSVVNARVLRATPGRVFDREALNAVKRWRFEPVSAPVTTRRTLVFAPGG"
     gene            complement(14156..14797)
                     /locus_tag="QEL58_001703"
     CDS             complement(14156..14797)
                     /locus_tag="QEL58_001703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006400856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00645 family protein"
                     /protein_id="HDS1676181.1"
                     /translation="MSHSPRPLSPLSSLIFASRWLQLPLYLGLILAQCVYVFLFGKEL
                     WHLLSHSVSMGEQQIMLIVLGLIDVVMISNLLVMVIVGGYETFVSRLRLEGHPDQPEW
                     LSHVNASVLKVKLAMAIIGISSIHLLKTFIATSALKGLPLCKPEQWAAAVSSASTSFY
                     SAGVETCTTMTQEGVLWQTIIHCVFILSAIGIAWTDKLMSNSHSKPHDKAHDH"
     gene            14908..15597
                     /locus_tag="QEL58_001704"
     CDS             14908..15597
                     /locus_tag="QEL58_001704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002804208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase N-terminal
                     domain-containing protein"
                     /protein_id="HDS1676182.1"
                     /translation="MIDLYYWPTPNGHKVTLLLEETGLQYRIHPVNIGSGDQFKPDFL
                     AISPNNKMPAIVDQAPADGGAPQSVFESGAILLYLAEKTGQFLPSDPRGRVTTLEWLF
                     WQMAGLGPMSGQMGHFNVYAPEKIPYAIERYDNEVRRLHGVMDKRLAQHAFLAGDEYT
                     IADMASYPWIGAYDRIPVDFAAFPNLKRWHEAIAARPATQRAYALRQQVNPNAGKPLS
                     DEERRHLFGQR"
     gene            15754..17979
                     /locus_tag="QEL58_001705"
     CDS             15754..17979
                     /locus_tag="QEL58_001705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012481560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S9 family peptidase"
                     /protein_id="HDS1676183.1"
                     /translation="MRHLFASLALMLATSTAAHAEKLTLEAITGPLPLSGPTLMKPKV
                     APDGSQVSFLRGKDSDRNQLDLWTYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRER
                     QRIAAMTGIVDYQWSPDAQRLLFPLGGELYLYDLKQQGQAAVRQLTHGEGFATDAKLS
                     PKGGFVSFIRGRNLWVIDLASGKQLQLTRDGSTTIGNGVAEFVADEEMDRHTGYWWAP
                     DDSAIAFARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVRVQLGVIAPAADAQP
                     RWVDLGKEQDIYLARVDWRDAQHLSFQRQSRDQKQLDLVEVALDSNRQRVLAHETSPT
                     WVPLHNSLRFLEDGSVLWSSERTGFQHLYRIDSKGKATALTRGNWPVDELLAVDEKAG
                     KAYFRAGIETSRESQIYAVSLQGGEPQRLSKAPGMHSASFARNASVYVDSWSNSSTPP
                     QIELFRANGEKIATLLENDLADPKHPYARYRDAQRPIEFGTLTAADGKTPLNYSLIKP
                     AGFDPSKRYPVAVYVYGGPASQTVTDSWPGRGDHLFNQYLAQQGYVVFSLDNRGTPRR
                     GRDFGGALYGKQGTVEVTDQLRGVAWLKQQPWVDPARIGVQGWSNGGYMTLMLLAKAS
                     NQYACGVAGAPVTDWGLYDSHYTERYMDLPARNEAGYREARVLTHIEGLRSPLLLIHG
                     MADDNVLFTNSTSLMSALQKRAQPFELMTYPGAKHGLSGADALHRYRVAEAFLGRCLK
                     P"
     gene            18005..18520
                     /locus_tag="QEL58_001706"
     CDS             18005..18520
                     /locus_tag="QEL58_001706"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005411551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676184.1"
                     /translation="MTLPPPIPAHQQRSAGWWCRHWRWAMPLTVVLVLGTVGGVVAWS
                     VLGWSEAARESPPMREALRRAGCSIELVDAFGEPLRAGSMPLGSMQTAINGQRDVGLT
                     VSLEGPHAHGRLFVKGTRSDDVWDYPVMYVLAEDKQTFDLTALDDDEAAHECALQACR
                     DRGECPLTAAL"
     gene            18588..20387
                     /locus_tag="QEL58_001707"
     CDS             18588..20387
                     /locus_tag="QEL58_001707"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012481559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF885 domain-containing protein"
                     /protein_id="HDS1676185.1"
                     /translation="MKPIALAVALALTAAPLLSAPPALAAPAAKATTPASPAWVARSN
                     ALAQILLDAQGPFQPEETGFFGVPGYDDKVADLGPDNGKRYRAAMAKARDELKAKLAT
                     EQDPNVRQDLEIMIHAASQNIEGSELNEKYLLPWSDAPQTVFSGLNLLLSDQVPAERR
                     AKAIDRLKAYAGLQPGGTAFTTLARQRYEERLKDSTLLQPTKIEVQQSLDNVETYITG
                     IESLLKKYQIAGADEAMKTLAGQMKDYAAWTRTEVLPKARADARLPAPLYAYQLKQVG
                     IDIDPKLLMQRAQLEFMETRSAMQQLAPLVVKDRGLKVADPSDPVAVIRALKADKIAD
                     DHLEGHYRKVIDAIDPLIREHAIVDVPKRAMQMRLGSAAESAASPAPHFLPAPLVNNT
                     GQQGTFVLPLGNPAAGPGAQYDDFNFGAAAWTLSAHEGRPGHELQFTAMVERGISLAR
                     TMFAFNSVNVEGWALYAEAEMVPYEPLDGQMIALQFRLLRAARAMLDPMLNLGLTDRA
                     NGERVLMEQVGLSKAMATQELDRYMVRMPGQAGSYFYGYTRILELRMQTELALGAKFD
                     RLAFNNFLLDQGLLPPDQLADAVNKVFVPKYKR"
BASE COUNT         3344 a         6832 c         6931 g         3370 t
ORIGIN      
        1 cccgtaaccg gacccaccct gccatcccgc ggaatgcatg ctgttgtttt tgccgttgcc
       61 gttgaagttg attcggcggg tgcagggccg caggccctgc gcgcagaact caactacgca
      121 tgcccacgcc acggcgcagc agccacagcg ccagcgccgt cagcaccacc acgaaaccga
      181 tcatcagccc gtaggccatc ggcagaggaa cgtcgctgct gcccagcagg ccatagcgga
      241 acgcattgac catgtagaag atcgggttcg cgtgcgtggc cgcctcggcc cagcccggca
      301 gcagtttcac cgaatagaac acgccgccca gataggtcag cggggtcagg atgaaggtcg
      361 gcacgatcgc cacgtcatcg aacttcttcg cgtataccgc gttgatgaag ccggccagcg
      421 agaagatcgt cgcgcccagg atcaccgtgg tcagcatcac gatcgggtgc gggatgcgca
      481 ccggggtgaa gaacatcgcg atgatcagca cgatcacgcc caccatcagg ccacgcagca
      541 cggcaccggc cacatagccc cacaggatca cccagttcgg catcgggctg accagcagtt
      601 cctccacgtg gcggccgaac ttggcgccga agaacgagga gctgatgttg ccgtagctgt
      661 tctggatcac gctcatcatc accaggcccg gcacgatgaa ctgcatgtag gtgtagccgc
      721 ccatgtcacc cacgcgcgac ccgatcaggt tgccgaagat caggaaatac agggtcatgg
      781 tgatcgctgg cggcaccagg gtctggcccc agatgcgcat gatgcgggcg acttcgcggc
      841 gcacgatggt catcagcgcg acgcggttgc gctggccgtc ggtcagctcg gtggtgctca
      901 tgcggaggtc tccaggttgc cggtgaggcg cacgaacagc tcctccaggc ggttgctctt
      961 ggtacgcatc gaacgcacgc ggatgccggc ctcgttgagc gtggcgaaca cgcggttgag
     1021 gtccatcgcg cgcggcatgt cgatgtccag cgtgtgcggg tccggtgcgg tcagggtcgc
     1081 gccctcgatc accggcagct gcgcgggcag ctcaccgtcg atgtccagca ggaagccttc
     1141 cacgtccagc ttggccagca gggcgcgcat cgggccctgc tcgacgatct ggccgtggtt
     1201 gatgatcgcc aggtggcggc acaggtactc ggcttcttcc aggtaatgcg tggtgaggat
     1261 gatcgtggtg ccggccgcgt tgatctcctt gagcacgcgc cacatgtcgc ggcggatctc
     1321 gatgtccacg ccggcggtcg gctcgtccag gatcagcagg cgcgggcggg tcatcatcgc
     1381 gcgcgcgatc atcagccggc gcttcatgcc gccggacagc gtgcggctca tcacctgggc
     1441 cttctcccac aggtgggcac gcttgagctc ctcttcggcg cgctgctccg cttcctcgcg
     1501 cggcacgcca tagaagccgg cgtagttcac caggatgtcg aagggcttct cgaacaggtt
     1561 gaagttgatc tcctgcggca ccagtccgat caggcgcatg gtggcgctgc ggttgcgcac
     1621 caggtcgctg ccgaacacct ccacctggcc ctcgctgagg ttgaccaggg aactgatgat
     1681 gccgatcagg gtcgacttgc cggcgccgtt ggggccgagc agggcgaaga agtcgcccgg
     1741 ggccacttcc agggaaaccc ccttcagggc ctgggtgccg ttgtcgtagg tcttgcgcag
     1801 gtcgcgcacg cgcagggcgg gcgccgtttc gttctgggat gccaagctcg aagccttcgc
     1861 gcccatgggc tggcgctgga gagggggcgg ggaggggcta ttatagaaga ccccgagggc
     1921 ttgccccggc tacacactgt cccgaaaagt cgtgcctgtt caattccccc tcaagctggt
     1981 cggccgccgc atgctggccc cgaccgtcgg ccactaccag ttcgtgcgtg atgacggaca
     2041 gccgctggat ttccagcccg gccagttcat ccaggtgcat ttcagctacg ccgacggcac
     2101 cgagaccaag cgcagttatt cgctggcgac catccacgac cacgcgttgg gcccgggcga
     2161 ggcggtggat atcgcggtca gtttcgtgcc cggcggtgcc gccacggccc tgttcgaggc
     2221 gctggaggac ggtggccagg tcagcgcgtc cggcccctac ggccgcttct gcctgaatcc
     2281 cggcgaccac aacggccgct acctgctgat cgccaccggc accggcgtca cgccctaccg
     2341 ttcgatgctg ccgctgctgg aaacggcgat ggccgagcgc ggcgtgcaga tcgtgctgct
     2401 gcagggcgcg cgcagcccgg gcgagctgct gtatagcgaa gacttctaca gcttcgccga
     2461 aaagcacccg aacttccgtt atgttccgtg cctgtcgcgc gaactgccag ccgaccccca
     2521 tccggacgta cagcacggct acgtgcagca ggcgctggcc ggtttcaccc cggacccggc
     2581 caccgacatc gcctacctgt gcggcaaccc ggacatggtc gatgcctgtg ccgagctgct
     2641 caaggccgcc ggcctgggca acccgcagat ccgccgcgag aagtacgtca gcagcaagta
     2701 agtcaggtag tgccggccgc tggccggcaa cctcatggcg ccttgaaatg cccaccggag
     2761 gcggcatcac gccgcccccg gtgccgtgac tcagtactcg atccaggcat cacgccaggc
     2821 agagccggtg cccgggcggt aggcctctgc attgacgttg caccaggcgc cttccgggaa
     2881 cgggcggcag gcgtacagct tgccgtcggt gcccttcacc acggtctggc cagggatgta
     2941 gctgccaatg cccgccgggt acacgaagtc gtagtcgccc ggcggcggat cgaccggatc
     3001 cggatccggc atccgggtat cgagctggaa cagatggcct ggcgtgaggt acacgcggtt
     3061 ctcggtagcc gatgccaccg gcgtgatcac gccattcttc aacacaccca cgcgggcatg
     3121 ctgggcgctg gcgttgacct tgcgggccag ggccagcggc cactgcgtcg cgccggtctg
     3181 gccggcagcc agggtgattt ccgggcgttc gaggtcgttg ccgttgccat tgaacacgcg
     3241 cagggtcagg gtggtgccca cttccagcgc gccacgggcg gtgaccgggc cggcgtcctg
     3301 ccactgcggg ggcggggtga cgccgccacc gtcttcaaag cgcacatcca tgcaggtgta
     3361 gaacgcttcg gtcgaatccg agcgctgcca ggtgttgtag atcacgtgct ggccgctgcg
     3421 cttgggcagc gggcagtcca gcttgtagac gtcgccggaa agcggcacgt tgcccagcgt
     3481 gcagaactcc tgcaggtcgg cccagcgcag cgggctgccc ggttgccagc cttcgcgggt
     3541 gacgtagaac ttccagtcgc gggtggcgtg gggggccggc gccttgaatt cgaaggtgta
     3601 gcgaccgcgt gcgtcggcac ggatcggtga ggtctgccag tcagtgcggt tcagatccag
     3661 cccgcggtac ttgctgttgc caccactgca cagctcgcca tcgggcacca cggcctggtg
     3721 gttgccgttg gcgttggcct ggttgatgcc ggcccagtcg tagaacggct gcgcaccccc
     3781 gatggccttg gccgccgcac aggccggatt ggtcgggttt tcggggttgc cctggtaaca
     3841 ggaatagacg cggctggagg gtttggacat ggtgccgtgg gcgaccgcgc tgcctgaagc
     3901 ggctacgccg gcgatcacgg acagcgcgag gacggcccgg tgggacagat gcatggagat
     3961 ctcctgtggg tggtggaacc cggtgaagtc tcggtatgcc gactgcctgt atccatcgga
     4021 ttactttgaa aaagaagctg cgtgatctcg agtgggaacg gcttcacgtt ttcaagccat
     4081 cgcgtttcac gatctgcagg gaacggcgct ccggcaccgt tccctgcatc cggtctcagt
     4141 atgcgatcca ggcatcgcgc caggccgcgc ccacgcccgg ccggtacgcg tcggcattga
     4201 cgttgcacca ggcgccttcc gggaacgggc ggcaggcata cagcttgccg tcgctgccct
     4261 tcaccacggt ctggccgggc acgtagctgc cgatgccggc ggggtacacg tgatcgaaat
     4321 cgccgcccgg cgagggcgtg cccgggtccg gtagctgggt gtcgagctgg aagcggttgc
     4381 cgttcttcag gtacacccgg ttgccggtgg ccgaggcggc gggtgtgatc acaccgttgc
     4441 tgagcacgcc cacgcgcgca tgctgcgcgc tggcattgac cttgcgcgcc agcgccaatg
     4501 gccattgcgc gggcgcggtc tggccactgg ccagcgtcgt ctcaacgcgc tccacatcgt
     4561 taccgttggc gttgaacacc cgcagggcca gggtggtgcc gaccggcagt tcgccacgtg
     4621 cggtgaccgg gccggcatcc tgccattgcg gcaccggcgt gccgccgccg ccgttgcctt
     4681 caaagcgaac gtccatgcag gtgtagaacg cttcggtcga atccgagcgc tgccaggtgt
     4741 tgtagatcac gtgctggccg ctgcgctgcg gcagcgtgca ctgcagcttg taggtgccat
     4801 cggccgacag cggcgtgttg cccagcgtgc agaactcctg caggtcggcc cagcgcagcg
     4861 ggctgcccgg ctgccagccg tcgcgggtga cgaagaagcg ccagtcacgc gtggcgtgcg
     4921 gcgcggtcgc cttgaagacg aaggtgaact tgccgttggc atcgggctgg atcggcgtgg
     4981 tctgccagtc gctgcggtcc agatccaggc cgcggaaggt cgggttgttg ccgctgcaca
     5041 gcttgccgtc ggggaccacg gcctggtggt tgccgttggc actggcctgg ttgatgccgt
     5101 tccagtcgta gaacgcctgc gaaccgccca ctgcctttgc ggcggcgcag gccgggttgg
     5161 tcgggttctc cgggttgccc tggaaacagg catagacgcg gctgaccggc gtggtcatgg
     5221 tgccatgggc gaacgcggtg ccggccaggg ccaggcctgc ggcagcgaat gaggtggtca
     5281 gcaacagcgg tgtggatcgg aatgacatgg cgcatccttg tggtcgtcga aagggagcgg
     5341 tgaccgcagg aactgcgctg cgcggcggac ttccggcgcc acccaggcga gtatcgagtc
     5401 gcactgcagg gtgtggaacc gtggacgttc cgatccgtga ctgcgcatgt gaagcccttc
     5461 ccaccggctt cacgtggggc tgaacggatg cgctgggcgt cacgcgatcg gcgtggcgtc
     5521 gatcacgtca tgtaggccac gctacgcggc ctgtgcatcg accctgtcgg cctggcacga
     5581 gaagcagcca tgcgcggcgt tgtgcaactg cacgaacgcc accgccgcgt tggcgaacag
     5641 cgcatccagc tgcgcggcga cgtcgctgcc cgcacagacc tgggcaccca gcatcagcgc
     5701 agaccggtcg taggcacgca ccgagatcat ccgccgctgc acatagggag gcaccacgcc
     5761 gggtggcagc acgcaccggg tcacgccacg ctgtacgaag atcgggccgg acgcgtgata
     5821 gggcgagtgc aggggcagat ggacatgcga cagcaggagc agttcgctgc cactgggcgg
     5881 gtcgctcagg ctgatccggc agggatggcc gccgccgtcg cccgcccagc ggcgctggat
     5941 gcccagcgtg gcaagcgcag tgtcgttctt ctcgaacagg tgctggaaag ggcggtggtc
     6001 gaggccaccg aggtaccacg cgtgcatggg cagctccttg gttttgcgag gattctgcgt
     6061 gtgcatcggt ggcattgctc gccgttttcc gacctcgcat ccacgccagg ccaagcaaca
     6121 ccgcaggcat cgcgcggcaa ggcgctaaga tgcgcgcgcc tgccccggcc gacgagcgcc
     6181 gcatgtccct ggattttccc accatcaccg tgcttggctt cctgctctgc atcggcatcg
     6241 ccgtgggctt ctcgctgctg ctggtggtgc tgcgcgggca accggtactg cggcagtgga
     6301 ccatcagcct gtggctgctg acgctggggg tgaccctgct ggcactgcgg ccctacctgc
     6361 cgctggcgcc tgccgtgctg gccggcaatg cagcgatggc cggctgtggc ctgatgatgc
     6421 tgcgcggggt ggcgctgcat ctgcagcagc cactgccgct gtggcggccg ctgctgatgg
     6481 cggcggcatt catggcctgc attttcgcgt tcctggtgct ctggccggac ctgcacatgc
     6541 gcctgcaggt gttcagtgtg ttcgcactga tcgtcgatgg ctggattgcc tggctgctgc
     6601 tgcgccatgc gcccgcgcag caacgcacca gctgccggct ggcggcggtg gtgttcctgg
     6661 ccgaagccac gctgtatgcc gtgcgcctgt tcctgccggt ggcgcccgac gccggcgagg
     6721 acatcatgcg caccggctcg ccgatgttcg tcacctacat tgccggggtg atgctggagc
     6781 tggcgcgctg cttcgccatg gtgctgctgc tggtcgagcg catgctggtc gacctgcggc
     6841 acgcggcgcg taccgatggc ctgaccggcc tgctcaaccg cagcgcggta ctggccgatg
     6901 gccaggcgca gttgcagcgc gtccgtcagc agggccgccc attggcgctg ttgctggtcg
     6961 atgtcgacca cttcaagcag atcaacgacc gttggggaca cctggccggt gaccaggtgc
     7021 tgcgccactt ctctgccgtg ctgcagcact gcacgcaggg aaagacgcac ctgctgggcc
     7081 gctatggggg agaggaattc gtgctggtgc tggcgggcag cacgtcgagc gacgccgcca
     7141 cgctggcggc aatgatccgt acccgcctgc agcggcaccc ggcggtgctg gcgacggggc
     7201 cggttgcggt cactgccagc gtgggactgg ccatggacga aggccaggga gacctgtcca
     7261 cgctgctggc cgccgccgat gcggcgctgt accaggccaa ggccgccggg cgcgatcagc
     7321 tggcctgcgc accggcagcg gcgatttcgc cgtttcccat cgccgccgag gccgtgcccg
     7381 tgtaagttgg gtcacatctt ccgcggcagc ccgtcgtggt cgacaggaac gtcctccagg
     7441 ggaaacgagc acgatgcaaa gacaccacct cgcgctggcc ggaatgctgg ccagcctgat
     7501 gcttgccggt tgcagccagc cgccgtcagc cgacacccag ggcgccagcg acgccccgag
     7561 ccgccgtttc ggcgccatcg atttccagcc ctgcacgctg tccaccgaag gtgccagcgc
     7621 caatgtcgag gcccagtgcg ccaccctgca ggtgccggag gaccgcgccc atcccggcgg
     7681 ccgccagatc gacctgcgca tcgcctggct ggaatcgggc agcagcggag ccggccagcc
     7741 tgatccggtg ttcttcctgg ccggtggccc cgggcaggcc gccagcgaag tggcggtcat
     7801 cgtcgacagc gcgctgcgcc aggtgcgcaa gcagcgcgac gtgttcctga tcgaccagcg
     7861 cggcaccggc ggttccaacc cgctcagctg cctcggcgcg gatggcaagg aactgcagat
     7921 ggacgaggac gcggccccca ccgaggcctc gctgcgcgat tacgcgcagc gctgcgcagc
     7981 ctcgctgcag gggcgcgccg atgcacgctt ctacaccacc gccgaggcca tcgccgatct
     8041 gaacgccgta cgccaggcgc tgggcgtgga caggctgaac ctggtcggtg gttcctacgg
     8101 cacgcgcgtc gcccagcgct acgcgatcgc ctatccgcag cacacccgca gcctggtcat
     8161 cgatggcgtg gtgcccaacg acctggtggt cggcggcgag ttcgcccgca cgttcgacaa
     8221 cgcgatcacc ctgcagtcgg cgcagtgccg caaggatgcc gtctgcagca agcggttccc
     8281 ggtcgatacc cgggaacagc tgcgcgccgt ggccgagacc ctgcggcgtg cgccggtcac
     8341 ggtcgattac cgcgatcccg gcaccaatgc gccccgccag gacgtgctga ctccggacag
     8401 cgtggttggt ctggccttcg cattctccta cgtgcccgaa tattcttcgc tgctgccgct
     8461 ggtgctggat gaagcggcgc agggccgata cgcaccgctg gcctcgctgg tgcgcggcgc
     8521 gacccgcagc atggatttcc agatcaaccg tggcatgcag tggtcggtga tctgcagcga
     8581 ggatgcgccg cgcttccagg ccccggcaga gagcgatgac gccctgttcg gtgccgaagc
     8641 ggcacgtgcg ttcttcgcgg cctgcccggt gtggccgcac cagccggcat cggccgcgct
     8701 gaccgcgccg ctgaagtcgg acctgccggt gctgctgctc tccggtgaac tggatccggt
     8761 caccccgccg cgctatgccg aacaggtgct caagggcctg cccaatggcc gtgcgctggt
     8821 cgcccgcggg cagggccatg gcacgctcaa cgccggctgc atgccgcggc tgcttggcca
     8881 gttcatcgac accaccgatg ccaaggcgct tgatgccagc tgcctggata cgctgagcta
     8941 cgtgccggcg ttcacctcgt tcaacggatg gaccccatga tcgtcgccga caacctgcac
     9001 aaggccttcg acacccgcac cggccgcatc caggcggtgt ccaacgtcgg tttccgtgcc
     9061 gccgatggcc agatcaccgg cctgctcggc cccaatggtg ccggcaagac caccaccatg
     9121 cgcatgctgt acacgctgat gacacccgac cagggcagca tcagcgtcga cggcatcgac
     9181 gccgcccgcg acccggtgga agtgcggcgc catcttggcg tgctgcccga tgcgcgcggc
     9241 gtctacaagc gcctgaccgc gcgcgagaac atcgcctact tcggtgaact gcacggattg
     9301 tccgcgcagc gcatccgcga acgcatcgaa gtgctgtcgc atgcactgga catgggtgac
     9361 atcctcgacc gccagaccga tggcttctcg cagggccagc gcaccaagac cgccatcgcc
     9421 cgcgcgctgg tgcacgaccc gcgcaacgtc atcctcgatg aacccaccaa cggcctggac
     9481 gtgatgacca cgcgcgcgct gcgccgcttc ctgctgggcc tgcgcgagga gggccgctgc
     9541 gtgatcctgt ccagccacat catgcaggag gtgggcgcgc tgtgcgacca catcgtgatc
     9601 atcgccaagg gcacggtgat ggccgccggc agtgccgatg aactgcgcgc gcagtccggc
     9661 gaatccaacc tggaagacgc gttcgtgaaa ctgatcggca gcgaagaggg cctgcacgca
     9721 tgagcatgat gtcgaccctg atgacggtga tgcgcaagga gctgcgtgac ctgtcgcgcg
     9781 accgccgcac actggcgctg accctgctgt tcggcccgct gctgtacccg ctgctgatcc
     9841 tgggcatggg caagctgtct gaaagccgcg tgcgcaccca gatcgagcag ccgctgcaga
     9901 ttcccaccat cggtgccgag cacgcgccga acctggtgcg cttcctggcc gcccagggcc
     9961 tgaatgccac tgccgcgccg aaggacctgg ccgaggccat ccgctcgcag gagatcgatg
    10021 tggcgctgcg catcagcccg gagttcggca gcaactgggc cgacggcaag ccggcgctgg
    10081 tggaggtgat ccgtgacagc acgcggcgtg ccgcagaggt gcccactgcg cgcctgcagg
    10141 cggcattggc cacctacaac ggccaggtcg gtgcgttgcg gctgatggcg cgtggcatcg
    10201 acgcccaggt tgcgcggcca ctggacatgg ccagccagga catggccagt gccgaagcca
    10261 agcgcggcct gatgctgtcg gcactgctgc cgatcctgct gactttgacc tcgttcctgg
    10321 gcggcgccta tctggtgatg gacaccactg ccggcgagcg cgagcggcag tcactcgaac
    10381 cgctgctggc cacgccgggt tcgcgcagcg ccatcgtcag cggcaagatc gccgccgcct
    10441 gcatggtcgg cttcgcgtcg ctgctgctga ccctgatcgc gttcaaggtc agtgcccaga
    10501 tcgcgccggg caatatcggc cgccagctca acatgaacat catggcgatg gtgcagatgc
    10561 tgctggtgat gctgccgatg ctgctgatcg gcacctcgct gctgaccttc ctggccgctg
    10621 cggccaagag catgaaggaa gcccagagcc acatgacctg gctgatgctg ttgccgatgc
    10681 tgccgggtta cgcgctgatc gcctatccgg tgaaaagcca gctgtggcag tacgcggtgc
    10741 cgttcctgtc gcagaaccag atgctgctga aggtgatccg ccacgagacc atcaccccct
    10801 cggtgtgggc gatttacctc ggcgccagcc tgggcctggc cgccgtgctg tggttcgccg
    10861 cggttcgccg ttaccacaac gaacgcctgg ccatctccag ctgagccgca aaaaagggga
    10921 cggagggaat taagtcgttt ctgcctctcc cgtccccgcc ttgcgcggac gcccccgctt
    10981 gcgcagcacc acggatctgc ccagcgtctg ctccaccatc cgcaggaacg cgttctctcc
    11041 caaaggatgt tgtcccgcgc tgtgggcacg gatggccggc aggtccgccg gtgcatccaa
    11101 gtcgtgcagg aatcgtgcat agagcttcgc gcgctgtatt ctttccgatg ccaatgcgtg
    11161 gaatgccgga tgctccgtca gcatcggatc atcacggcgt tgcaggtttc cgtgcacgct
    11221 cgaccatgga tggtcttccg gatcggtggt catgccggcg cggaccggat tgagctcgat
    11281 atagcgatac acgctgagca ggtagctgtc gctgtcaacc atggaagagt ggaagcgccc
    11341 ctgccagagc gggccgctgc gcgcatgccg ttgattgaac gcctggacat agctgttgcc
    11401 ctgcatgcgc attgcgttgg ccaggcccag atgggtggat ggcgtggcca gcagatgaac
    11461 gtggttgccc atcaggacgt acgcatgcag cgcgacgtga tgtttcacga aggcgttgtg
    11521 cagcaggtgc aggaacagtt ggcggtcact atcgtcaacg aagatggcgc ccttgttcac
    11581 accccgctgc gttacgtggt acggctggcc agccaacatc aggcgcgctt gtcgaggcat
    11641 ggggatccac gcgtgcggag attgcccaga gtgccgctgc cgtgcctgtg gaagacatca
    11701 ggcattgccg cgaagttgtg tgggacgcgg cagaaacgac ttaattccct ccgtcccctt
    11761 ttccgtagcg cgcgggtgtc acccccatct cgcgcttgaa cacactgatg aacgcgccgg
    11821 gcgtgtcgta gcccatcgac aacgcgacgc tgatcaccgg ctcacccgcc agcagctgcg
    11881 gcagtgcaag caggacgcgc aggcgctgcc gccagcggct cagtgtcatg ccggtctcgg
    11941 ccagccaccg gcgggcgagg ctgcggctgg ataaaccact ggcgatggcc cacgcctcga
    12001 tgctgcggtt gtcgtatggc gcgcgtgtca atgcagcggc gatccgccgc aggcgacgat
    12061 cgcgtggctg ggccaaggcc agcggcagcg gtgtgctggc agcgatctca tcggcgatca
    12121 caccggccag tcgcgtttgc acagcatcca gtggtgggtg gggccattgc agcgcacgcg
    12181 ccgtcgcagc cttcagaagc gcgttgggct gaagaatgcg tggcgtgacg ggcaggccca
    12241 ggcaggcctc ggcactgaag tacaggctcc agccatcgaa acgctccgcg ctcaccagtg
    12301 cgtggggcag tgagggcggt atccaggcga tatgacccgc cggcagcagc cagtgcaggt
    12361 ggccaacgtc gatccgcaac aggccctgat gcgcgcccag cagctggcct cgggcatggt
    12421 ggtggcggga ggtgcggcgc ggaacgtgca ggcgcaactg ggccgcccac accaccggtc
    12481 cgtcggcggc atcggccaac gcggggtcga acaatgcagt ggatgtctga tctgacatat
    12541 cgaatggccg ttatacggca gaaccgtcat cgtcaggtgc acagactgga gtccacttca
    12601 acggagtact ccgccatgca gccacaggac atccttcccg accaccagaa cgacgtccag
    12661 atcaacggtc tcaccgtgcg caagggcagc gtcggtgcct tcctcgccag cgctcgtgac
    12721 tggcaggacc ctgccggtga tcccgccatt cgtgccgccg ccgaagccga cctgcgtgcg
    12781 ctgttgccgg gtctgcacgc actggggctg ttccaggtgc tggctgcgcg tgatccggcg
    12841 ttgcaacgcc tgatcgacgg cgtggcctga aaaagagaag gcccggacaa gccgggcctt
    12901 tgcgtcaatg tggggcggaa gcgacttaat cccctccgtc ccctttttgc ggtcagccgc
    12961 ccggcgcgaa caccagagta cggcgggtgg taaccggggc gctgaccggc tcgaagcgcc
    13021 agcgcttcac tgcgttgagg gcttcgcggt cgaatacgcg gccgggcgtt gcgcgcagca
    13081 cgcgtgcgtt caccaccgag ccgtcggtgc cgacggtgat ctccaccagc acttcgcccg
    13141 aggtgcccga gcgcagggcc tcgcccggat aacgcggcgc cggcgtgctg accgggcgca
    13201 gggtcggtgc agccggggcc gccgcctggc gtgcggcgct ggcctgctgc gcggcggcct
    13261 gctgctgctt ctgctcggct tcacgacggg cggcggcctg gcgctcggcc tcctgccgtt
    13321 cgttgtcgcg gcgtgcggca tcctgctgcg cggcaatctg cttggcggca tcggcctcct
    13381 tggcgcgttg ctcggtcaga cgctgctgct cggtctgctg cttgctgcgg tcctctgcgt
    13441 ctttcttcgc cttttcggct tccgcttcgg tgcgcttggc ggcgttctgc acgcccttgg
    13501 ccaggccttc cttcaggcgc ggcagcgccg gcgcggacgc atccactttc tcgatcaatg
    13561 ccaccaggcg ctgcgcctcg gtgtaatcct cgcgcgccag atgctgctcg gcggcgatca
    13621 gggtgtaggg cagcaggtcg gtcagcgcac tcttcaccga ggcgtcgtct ggcgtcttgt
    13681 cacgcagggc gaggtagtac tcgatggcgt tgtcaccggc cggtgcgtac atgcggttct
    13741 cgcgcagcgc ctggctggcc gattcgcgca gctgttcggt acccatcgac tgcaccttgg
    13801 cagcgaccac cggagcggcc ggtgcagcag cggcgggcgc cttgtccggc gcggaagccg
    13861 gagcttcctc cttgcccgag caggcggcca gcgccagtgc cagggcaacc ggcagccacc
    13921 ggcgcgcggc ggtgatcatt gagacgtgcg acatcctgct cccctctaga agacgacgtg
    13981 acgtaaatca ttgatatgca tggccgggac ctgtggtccg ggcgcggctg ggtgacgttt
    14041 cccgacgcca ccgccggcaa cggcgagggt gcaatctagc atcccggcca ccgccgcgta
    14101 caaggggcgg tggccgggac aggcaacggc ggtcaggccg ctgccggcga cggcctcagt
    14161 ggtcgtgtgc cttgtcgtgc ggcttgctgt ggctgttgga catgagcttg tcggtccagg
    14221 cgatgccgat cgccgacagg atgaacacgc agtggatgat ggtctgccag agcacgcctt
    14281 cctgggtcat ggtcgtgcag gtctcgacgc cagcgctgta gaagctggtc gaagccgacg
    14341 acaccgcggc ggcccattgt tccggcttgc acagcggcag gcccttcagc gcgctggtgg
    14401 cgatgaaggt cttcagcagg tggatcgagg aaatgccgat gatcgccatt gccagcttca
    14461 ccttcagcac gctggcattg acgtggctca gccattcggg ctggtccgga tggccttcca
    14521 ggcgcaggcg cgagacgaag gtctcgtagc cgccaacgat caccatcacc agcaggttgg
    14581 agatcatcac cacgtcgatc aggcccagca cgatcagcat gatctgctgt tcgcccatcg
    14641 agacggagtg ggacagcagg tgccagagct ccttgccgaa caggaatacg tagacgcact
    14701 gggcaaggat caggcccagg tacagcggca gctgcagcca gcgcgaggcg aagatcagcg
    14761 aggacaacgg ggacagggga cgaggactgt ggctcatgca ggacagtgcg tttcggggga
    14821 gccgcgaggt taccggcctg ccatgacggt gccaacccaa ctctcgcact agactccagg
    14881 ttcctttccg caccccgagc cgccgccatg atcgacctgt attactggcc caccccgaac
    14941 ggccacaaag tgaccctgct gctggaggaa accggcctgc agtaccgcat ccacccggtc
    15001 aacatcggct cgggcgacca gttcaagccg gatttccttg cgatatcgcc caacaacaag
    15061 atgccggcca tcgtcgacca ggctccggcc gatggcggcg ccccgcagag cgtgttcgag
    15121 tcgggtgcga tcctgctgta cctggccgag aagaccggcc agttcctgcc cagcgacccg
    15181 cgtggccgcg tcaccaccct ggaatggctg ttctggcaga tggccgggct gggcccgatg
    15241 agcggccaga tgggtcactt caatgtgtac gcgccggaga agatcccgta tgccatcgag
    15301 cgctatgaca acgaagtgcg ccgcctgcac ggggtgatgg acaagcgcct ggcccagcac
    15361 gccttcctgg ccggtgatga gtacaccatc gccgacatgg ccagctaccc gtggatcggc
    15421 gcctacgaca ggatcccggt cgattttgcc gcgttcccga acctgaagcg ctggcatgag
    15481 gccatcgctg cgcgaccggc cacccagcgc gcctacgccc tgcgccagca ggtgaacccg
    15541 aacgccggca agccgctcag cgacgaagag cgcaggcacc tgttcggcca gcgttgacct
    15601 tggagggtgg gtgccgaccg ctggtcggca ctccatacgg gcaggcccca tgggcaaaag
    15661 gtcatgctgt cttcccgcac gggcttggtt aggatggggg acgaccgccc cgcgcccgcg
    15721 cggaggcgga cctgccgttt gccgggattc ttcatgcgcc acctgttcgc ttcgctcgcc
    15781 ctcatgctcg ccaccagtac cgccgcccac gctgaaaagc tgaccctgga agccatcacc
    15841 ggcccgctgc cgttgtccgg cccgaccctg atgaagccca aggtggcgcc ggacgggtcg
    15901 caggtcagct tcctgcgcgg caaggacagc gaccgcaacc agctggacct gtggacctac
    15961 gacatcggca gcggccagac ccgcctgctg gtcgactcca aggtggtgct gccgggcacc
    16021 gagaccctca gcgatgagga aaaggcccgc cgcgagcgcc agcgcatcgc cgcgatgacc
    16081 ggcatcgtcg attaccagtg gtcgccggac gcgcagcgcc tgctgttccc gctcggcggc
    16141 gaactgtatc tctatgacct gaagcagcag ggccaggccg cggttcgcca gctgacccac
    16201 ggcgagggtt tcgccaccga cgccaagctg tcgccgaagg gcggcttcgt cagcttcatc
    16261 cgcggccgca acctgtgggt gatcgacctg gccagcggca agcagctgca gctgacccgc
    16321 gacggcagca ccacgatcgg caacggcgtg gccgaattcg tcgctgatga agagatggac
    16381 cgccacaccg gttactggtg ggcgccggac gattcggcca tcgccttcgc gcgcatcgac
    16441 gagtcgccgg taccggtgca gaagcgctac gaggtctatg ccgaccgtac cgacgtgatc
    16501 gagcagcgct atccggccgc gggcgatgcc aacgtgcgcg tgcagctggg cgtgatcgcg
    16561 ccggccgccg acgcacaacc gcgctgggtc gacctgggca aggaacagga catctacctg
    16621 gcccgcgtcg actggcgcga tgcgcagcac ctgagcttcc agcgccagtc gcgtgaccag
    16681 aagcagctgg acctggtgga agtggcgctc gattccaacc gccagcgcgt gctcgcccac
    16741 gaaaccagcc cgacctgggt gccgctgcac aacagcctgc gcttcctgga agacggcagc
    16801 gtgctgtggt cgtccgagcg caccggcttc cagcacctgt accgcatcga cagcaagggc
    16861 aaagccaccg cgctgacccg cggcaactgg ccggtggacg aactgctggc ggtcgatgag
    16921 aaggccggca aggcctactt ccgcgccggc atcgagacct cgcgcgaaag ccagatctac
    16981 gcggtgtcgc tgcagggcgg cgagccgcag cggctgtcga aggcgccggg catgcacagt
    17041 gcgagcttcg cccgcaacgc cagtgtctat gtcgacagct ggtccaacag cagcacgccg
    17101 ccgcagatcg agctgttccg tgccaatggc gagaagatcg ccaccctgct cgagaacgac
    17161 ctggccgatc ccaagcatcc gtatgcgcgt taccgtgacg cgcagcgccc gatcgagttc
    17221 ggcacgctca ccgccgctga tggcaagacg ccgctcaact acagcctgat caagccggcc
    17281 ggtttcgatc cgtccaagcg ctacccggtg gcggtgtacg tctatggtgg cccggccagc
    17341 cagaccgtca ccgacagctg gcccggccgc ggtgatcacc tgttcaacca gtacctggcc
    17401 cagcagggct acgtggtgtt ctcgctggac aaccgcggca ccccgcgtcg tggccgtgac
    17461 ttcggcggcg cgctgtacgg caagcagggc acggtggaag tgaccgacca gctgcgcggc
    17521 gtggcgtggc tgaagcagca gccgtgggtg gacccggcac gcatcggcgt gcagggctgg
    17581 tccaacggcg gctacatgac cctgatgctg ctggccaagg catcgaacca gtacgcctgc
    17641 ggcgtggccg gtgcgccggt caccgattgg ggcctgtacg acagccacta caccgaacgc
    17701 tacatggacc tgccggcgcg caatgaagcg ggctaccgcg aagcgcgcgt actgacccat
    17761 atcgagggcc tgcgttcgcc gctgctgctg atccacggca tggcggacga caacgtgctg
    17821 ttcaccaact cgaccagcct gatgagcgcg ctgcagaagc gtgcccagcc gttcgaactg
    17881 atgacctacc cgggcgccaa gcatggcctg tccggtgccg atgcgctgca tcgctaccgc
    17941 gtggccgaag ccttcctggg acgttgcctg aaaccctgaa ccacagccgg gaaggagccc
    18001 gccgatgacc ttgccaccgc cgattcccgc tcatcagcag cgatctgctg gctggtggtg
    18061 ccgccactgg cgctgggcga tgccgttgac cgtggtgctg gtgctgggca cggtcggtgg
    18121 cgtggtggcc tggagcgtgc tgggttggag cgaggcggcg cgcgagagcc cgccgatgcg
    18181 cgaagcactg cgccgcgccg gctgcagcat cgagctggtg gacgcgttcg gcgagccgct
    18241 gcgtgccggg tcgatgccgc tgggcagcat gcagaccgcg atcaacggcc agcgtgatgt
    18301 cggcctgacc gtctcgctgg aagggccgca cgcgcacggc cggttgttcg tgaagggcac
    18361 ccgcagcgat gacgtgtggg attacccggt gatgtacgtg ctggccgagg acaagcagac
    18421 cttcgacctg accgcgctgg atgatgatga agcggcgcac gaatgcgcgc tgcaggcctg
    18481 ccgtgatcgt ggcgagtgcc cgctgaccgc cgcattgtga cctccggccg attgtcgccg
    18541 ccgcactgaa cgcgtagggt gcgggcaacc ctgtcctgga gtgcaccatg aagccgatcg
    18601 cgttggccgt tgccctggcc ctgactgccg ccccgctgct gtccgcaccg ccggccctgg
    18661 ccgcacccgc cgccaaggcc accaccccgg ccagcccggc ctgggtcgcc cgcagcaatg
    18721 cgctggcgca gatcctgctg gatgcgcagg ggccgttcca gccggaagaa accggcttct
    18781 tcggcgtgcc cggctacgac gacaaggtgg ccgacctggg ccccgacaac ggcaagcgct
    18841 accgcgccgc gatggccaag gcacgtgatg agctgaaggc gaagctggcc accgagcagg
    18901 atcccaacgt ccgccaggac ctggagatca tgatccatgc cgccagccag aacatcgaag
    18961 gcagcgagct caacgagaag tacctgctgc cgtggagtga tgcgccgcag acggtgttca
    19021 gcggcctcaa cctgctgttg tccgaccagg tgccggccga gcgccgcgcc aaggcgatcg
    19081 accgcctcaa ggcctatgcc ggcctgcagc cgggtggcac cgccttcact acgctggcgc
    19141 gccagcgcta cgaagagcgg ctgaaggaca gcacgctgct gcagccgacg aagatcgaag
    19201 tgcagcagtc gctggacaac gtcgagacct acatcaccgg catcgagtcg ctgctgaaga
    19261 agtaccagat cgccggtgcc gacgaggcga tgaagaccct ggccgggcag atgaaggact
    19321 acgcggcctg gacccgcacc gaggtgctgc cgaaggcacg tgccgacgcg cgcctgccgg
    19381 cgccgctgta cgcctaccag ctcaagcagg tcggcatcga catcgacccg aagctgctga
    19441 tgcagcgtgc gcagctggag ttcatggaaa cccgctcggc gatgcagcag ctggcgccgc
    19501 tggtggtgaa ggacaggggc ctgaaggtgg ccgatccgag tgacccggtg gcggtgatcc
    19561 gcgcgctgaa ggccgacaag atcgctgacg atcatctgga aggccattac cgcaaggtga
    19621 tcgatgcgat cgatccgctg atccgcgagc acgccatcgt cgacgtgccc aagcgcgcga
    19681 tgcagatgcg cctgggctcg gccgccgaga gcgcggccag cccggccccg cacttcctgc
    19741 cggcaccgct ggtcaacaac accgggcagc agggcacctt cgtgctgccg ctgggcaacc
    19801 cggccgcggg cccgggcgcg cagtacgacg acttcaactt cggggcagcg gcatggacgc
    19861 tgagtgcgca tgaaggccgc ccgggccacg agctgcagtt caccgcgatg gtcgagcgcg
    19921 gcatctcgct ggcgcgcacc atgttcgcgt tcaattcggt gaacgtggaa ggctgggcac
    19981 tgtacgcgga agccgagatg gtgccgtacg agccgctgga cgggcagatg atcgcgctgc
    20041 agttccgcct gctgcgcgcc gcacgcgcga tgcttgaccc gatgctcaac ctcggcctga
    20101 ccgaccgtgc caacggcgag cgcgtgctga tggagcaggt cggtctgtcc aaggcgatgg
    20161 ccacccagga actggatcgc tacatggtgc gcatgccggg ccaggccggc agctatttct
    20221 atggatatac ccggatcctg gagctgcgca tgcagaccga actggcgctg ggcgcgaagt
    20281 tcgaccgcct ggcgttcaac aacttcctgc tcgaccaggg cctgctgccg ccggaccagc
    20341 tggccgacgc ggtgaacaag gtgttcgtgc cgaagtacaa gcgctgagca tcgccgggta
    20401 atgccggcca ctgcccggca atcgccgtct gtagatgccg accttggtcg gcgccgtggg
    20461 tttcgtgcca accaagg
//
LOCUS       DAOKIP010000054        20388 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.054,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000054 DAOKIP010000000
VERSION     DAOKIP010000054.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 20388)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20388)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20388
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.054"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(121..1101)
                     /gene="secF"
                     /locus_tag="QEL58_001708"
     CDS             complement(121..1101)
                     /gene="secF"
                     /locus_tag="QEL58_001708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012438079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecF"
                     /protein_id="HDS1676186.1"
                     /translation="MKLFPLHILPNDTKIDFMRWRHVAMAVTIVVFLASVAIIGFKGF
                     NYALDFTGGTLIEARFDKAVDVEQVRTKLEENGFDGAQVQSVGGNTDLLIRLAPHGEH
                     APGTGDAAAEDKATAAAVVKALSTADNQATVLRNEFVGPQIGKDLAMNGLYATIFMLA
                     GFLIYIAVRFEWKFAVTASIVAMFDLIVTVAYVSLLGREFDLTVLAGLLSVMGFAIND
                     IIVVFDRVRENFRSLRVDSMEVLNRSINQTLSRTVITAVMFFLSALALYMYGGSSMEG
                     LAETHMIGAVIVVLSSILVAVPMLTIGFLRVSKQDLLPKAKDVEALARRP"
     gene            complement(1117..2973)
                     /gene="secD"
                     /locus_tag="QEL58_001709"
     CDS             complement(1117..2973)
                     /gene="secD"
                     /locus_tag="QEL58_001709"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005917104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecD"
                     /protein_id="HDS1676187.1"
                     /translation="MLEFPRWKYVVILIVLALSALYALPNIYQKDPAIQITANRGGQV
                     DDALRDRVLADLNKAGITTIGAEKEGESLIVRLPDLKAQSAASDALRDTIGEQYTVAL
                     NLASTVPDWLANLGGRPMVLGLDLQGGVHFVLQVDQKAALDKRLDAYTEDVRSTLRDA
                     RIAYQSVERRADNSIVANLSPSAGDDAAQLARTALVKAQPTLGYDVSGSRITVTIPEA
                     EITQIANGAIEQNINTLRNRVNQLGVAEPIIQRQGADRVVVQLPGVQDTAEAKRMIGA
                     TATLEYRAVVEGNAQDAIASGRIPPEAKVYQRRDGGGPVLLNKRVIVTGDQMVGAQAV
                     TDSNSGSPAVSVTLNNVGGQRMFDFTSANVNKPMAVVYTERVPTVTVVDGQEVRGFKV
                     NEEVISVANINGVFGKNFQTTGLQKKEAEDLAKLLKSGSLAAPMDFVEERVVGPSLGA
                     ENVKNGMRAVVFAFLFTLVFFSIYYRMFGVITSIAMLFNLLIVVAVMSMFGATMTLPG
                     FAGLALSVGLSVDANVLINERIREELRAGVPGKTAIVTGYERASGTILDANLTGLIVG
                     VALFAFGTGPLKGFALTMIIGIFASMFTAITVSRALATLIYGSRKKLQNVAI"
     gene            complement(3035..3379)
                     /gene="yajC"
                     /locus_tag="QEL58_001710"
     CDS             complement(3035..3379)
                     /gene="yajC"
                     /locus_tag="QEL58_001710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006434333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit YajC"
                     /protein_id="HDS1676188.1"
                     /translation="MNLLAFLIPAAHAQAAGGQPQGMGLTTLLFPIILIAIMYFLMIR
                     PQMKRQKEHKAMLEKIKRGDEVLTNGGIAGIVTDIGDNFITIEVADNVRIRVQKGAVG
                     NVLPAGTLKSAQ"
     gene            complement(3513..4643)
                     /gene="tgt"
                     /locus_tag="QEL58_001711"
     CDS             complement(3513..4643)
                     /gene="tgt"
                     /locus_tag="QEL58_001711"
                     /EC_number="2.4.2.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012479928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA guanosine(34) transglycosylase Tgt"
                     /protein_id="HDS1676189.1"
                     /translation="MSRLQFQLKTRDGRARRGRLTFPRGTVETPAFMPVGTYGSVKGI
                     LPDQVRALGAEIILGNTFHLYLRPGLDIIADHGGLHGFCRWDGPILTDSGGFQVFSLA
                     HRRKITEQGVTFASPTDGARVFLGPEESMKIQKVLDSDVVMIFDECTPYPATEDVARR
                     SMELSLRWAQRSRNAHDELGNDAALFGIVQGGVHTDLRSRSAEALQAIGFDGYAIGGL
                     AVGEPEHERNAMLDHLDPELPGDRPRYLMGVGRPEDLVEGVARGVDMFDCVMPTRNAR
                     NGHYFTSFGTVRIRNSQYARDMDPIEPGCGCVACTGGYTRSYLRHLDRCNEMLAPMLG
                     TLHNLFYYEKLMADIRAAIEAGTFLAFRESFYAARGAVAPPL"
     gene            complement(4723..5820)
                     /locus_tag="QEL58_001712"
     CDS             complement(4723..5820)
                     /locus_tag="QEL58_001712"
                     /inference="COORDINATES: protein motif:HMM:NF017773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDS1676190.1"
                     /translation="MRRIAGLCLIVCGLSSCTSVPDVAYWPEHEAVRLDAPARSERMV
                     IEIDDAGRFHWPGQFDRLQHWLAEEPAELPVVVFINGWHHNASPKDSNFTDFDQFLAK
                     VEARAGTPVRGLYVGWRGDSIDTPLTWEPSDFLTVWDRKCASVTVGEGGLAQVVTMLR
                     EQHPERAVYMIGHSFGGSALFHAIKDGLAQEQLHGFEYFMLNPAVAEGEFDAVEQALV
                     AAWAASPAFSGAVSITAADALRQHRKVTVLQAQGDKAVGWGYRIAFRDTPIGFDRQRQ
                     THRAKVCNTGDACRPTPADTCTATLADGRFVLRAVSIPGQGCVPMQQRPVWVIAGEDS
                     VSANHNDILNSIQAEALADLLAQRWRQRAGR"
     gene            6042..7007
                     /locus_tag="QEL58_001713"
     CDS             6042..7007
                     /locus_tag="QEL58_001713"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676191.1"
                     /translation="MVTRAQAKDLRTRLDQLGVRGVSLQMILDSGYEPVHERIMLMSY
                     GCPGQPSCAAHSERGHISMGLQWNDNPPDVPSLGACQGKVVMMPHRSGNCWLAHMLKA
                     KRNPDAGYGEASLMAQRSHYGDMQFLHAMASEPGEAASTTLEHMMAWAEYSYRLSLRG
                     GLEQLDVEAPVRQFAGLAPWFQAEKRHWTGADLFMFGHEYDEPLIRDMAFGSLLHLLQ
                     DSYSQSHVQRDYAADGLPIERLLTYRGQSSHCHAKADRKGPEGKKPLAANLRAAIEMG
                     RELIALRERTAPWTEAEGLLRGSAFRLAADVQPAGTGAFTSKNCK"
     gene            complement(7021..8088)
                     /gene="queA"
                     /locus_tag="QEL58_001714"
     CDS             complement(7021..8088)
                     /gene="queA"
                     /locus_tag="QEL58_001714"
                     /EC_number="2.4.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004153293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA preQ1(34) S-adenosylmethionine
                     ribosyltransferase-isomerase QueA"
                     /protein_id="HDS1676192.1"
                     /translation="MRAIVDLLPPTALKKSDFNYDLPAELIAQAPLAERSASRLLLVP
                     PAPAGFTDLQVRDLPSQLQPGDLLVFNDTRVIPARLFGQKASGGRVEILIERLLGGQQ
                     ARAQVGASKSPKAGSRIALDAGGEAEVLGRDGEFYVLQFHVPESLEQWLLHAGRLPLP
                     PYIQREPGVDDRERYQTVFAREVGAVAAPTAGLHFDEPLLAALKEKGVDFGHVTLHVG
                     AGTFQPVRADDLKDHVMHREWLNVGAELVQQVRRTRAAGGRVIGVGTTVVRALESAMR
                     DGELLPFAGETQIFITPGYRICSVDAMVTNFHLPESTLLMMISAFAGKDRVFEAYQHA
                     IEQRYRFFSYGDAMLLFPQAG"
     gene            8300..9796
                     /locus_tag="QEL58_001715"
     CDS             8300..9796
                     /locus_tag="QEL58_001715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012438074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HDS1676193.1"
                     /translation="MSFIERLAPLRNQPGTRLTTGLDDATLTALSARHPQLVAAVEAA
                     AEEFARVQADLGPLLAQDEQAQIDAMQDGFVNFYADDAVTPYVALAARGPWVVTLKGA
                     VLYDAGGYGMLGFGHTPDAVLEAMARPQVMANIMTPSLSQQRFITALRAEIGHRRGGC
                     PFARFMCLNSGSEAVGLAARIADVNAKLQTDPGARHAGAAIKRVVVKGSFHGRTDRPA
                     LYSDSSRKSYMQHLASYRGEDSVITVAPYDEAGLRKVFEDAARNHWFVEAVFLEPVMG
                     EGDPGRSVPPAFYALARELTRAHGSLLLLDSIQAGLRAHGVLSVVDYPGFEGLDPPDM
                     ETYSKALNAAQYPLSVLAVTEHAAQLYRKGIYGNTMTSNPRALDVACATLAQLTPQVR
                     ANIAERGAEAVRKLEQLKGELGGLITKVQGTGLLFSCELAPQFKCYGANSTEEWLRQH
                     GINVIHGGENSLRFTPHFGMDSEELDLLVGMVGRALREGPRREQAAAA"
     gene            9897..10490
                     /locus_tag="QEL58_001716"
     CDS             9897..10490
                     /locus_tag="QEL58_001716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010484495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00730 family Rossman fold protein"
                     /protein_id="HDS1676194.1"
                     /translation="MKSICVYCGSNAGSKPAYTERAIALGDRIARDGLRLVYGGGNVG
                     LMGTVANAVLAAGGEVTGVIPRQLADWEVAHRGLTELEIVGSMHERKSRMFDLADGFV
                     ALPGGFGTMEEIFEMLTWRQLGIGNKPCAFLDVDGFYAPLIGMIDRMVEERFLHPDQR
                     QDLWYGSDIEEMLTWMQNYQPAQASKWIDEKRRAALR"
     gene            complement(10510..13353)
                     /locus_tag="QEL58_001717"
     CDS             complement(10510..13353)
                     /locus_tag="QEL58_001717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010484493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HDS1676195.1"
                     /translation="MSTYAEPAEEPPHEVVLSTALVRALHALLPESAVVRVGWDDPQL
                     GCGQGGWPLLAVTGCASGEPGIGDGQHGWEYDGARLLLSVAGAAPSSAWWGLARQAME
                     LALQRGRQAGQIKALEEAERLQQALFQIADLAGADLEMGEMLRHVHGVLGTLMYAENC
                     YIVEYDDVRDQIRFLYFADQVDDFVADPSQSHAASEMPRSLTVALLRHGRPLSGPSRE
                     LLARVMEQEHDPQRGPESLDWLGVPMLRDGRVCGAIVVQSYEQAARYGEAERALLGFV
                     AQHVQTAMDRRQAQVRLEQQVERRTQELQRANHSLQDEVTERRRAEQLQTALYNIAEM
                     AMSADSLAQFYGQVHGVVGRLLDARNFYIALVNPAGNGLDFVYSVDEHNASRAPRPFS
                     RGLTEYVVRNRRPLLASRAQIDALLATGEVRESGARSHCWLGVPLLRDDEVVGAIVVQ
                     SYSENSTFSVHDQRLLTFVAQNIGTGLARQRDQQRLRSAHAELEKRVEERTRELAEVN
                     EKLLGQIGERLRAEQRLTHQAMHDALTGLPNRLHLLDRLQDALALARREGGPVFAVLF
                     LDLDRFKLVNDSIGHAAGDRMLVEVAKRIVSMAGPEDVVARLGGDEFAVLLQCPQGLA
                     QALDFGQRLLLALQESIWIAGRELFPSGSLGIALWNPRYRTGEELLRDADAAMYRAKA
                     QGHDRCSIFDEDMREQAMRSLDLEADLRRAINNRDFVPFYQPIVRLSDGEVVGHEALL
                     RWQHERRGLLLPGAFLELGEESGLIEQVDWLIYEQVIAGLGKGGQGYVSVNVSPRHFR
                     SAEFSDRLFGLLDTCGADPRRLRLEITEVALLDDGPHTLRILQGLRERGIQVQLDDFG
                     TGFSALSYLHRFPISTLKIDQSFIAGLHGPEVQSTRALVEGVLSLARTLGIETIGEGI
                     ETEAQRQTLRELGCDYGQGYLLGRPAPRVHAVA"
     gene            13496..14119
                     /locus_tag="QEL58_001718"
     CDS             13496..14119
                     /locus_tag="QEL58_001718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013535018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HDS1676196.1"
                     /translation="MNPALPALATGYAPSPAGLTLYAVEASALPTDEALMLAWAGGDL
                     RAFESLYARHRKRLFGFLLRQLRDNALAEEIFQDVWQRVISARAGWQPEAAFSTWLFR
                     IAHNRLNDHWRAARHRPSAPADADLRLAAIEDGQTPEAELSEFEQRRRIHLAMEQLPP
                     EQREVLQLRLDQELSLEEIGQITGVGRETVKSRLRYAMDKLRAGLNA"
     gene            14116..15132
                     /locus_tag="QEL58_001719"
     CDS             14116..15132
                     /locus_tag="QEL58_001719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005413016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676197.1"
                     /translation="MNRDEPLTPEERELARLLGRRAEQAPPAALDAAILAAARAAVDA
                     PAAATAASPEAPRARRSRSRWPAVFGIAASMVFAIGIAWQLRPEPPPVPAGEAAVAAA
                     PAAAEIAADAPPAAGGAADRTAAAAEPAVPPATPEAAPMAAPMATPTPAPASAARAPA
                     VAAAPKPAPVDAPARAARSRAAEAAADTPFATPSAAPAAAPPAPPAPAAYSAPAPAFA
                     PAPAAALKARTAEAAMDNAAANAEPAQALDRVQITSMKREAASRSAAGVMRRSSDASL
                     SADAVQAEVGADARLPRRQWLEKIRERRDAGQRDLARASLERYIEQYPESRLPRDLRP
                     LLDD"
     gene            15173..15769
                     /locus_tag="QEL58_001720"
     CDS             15173..15769
                     /locus_tag="QEL58_001720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014036860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YigZ family protein"
                     /protein_id="HDS1676198.1"
                     /translation="MPDTLAQPVSHTLEVKHSRFIAHATPIDGAAAAMAFLQQVAVAD
                     ATHNCWAYRHGQDYRSSDDGEPAGTAGRPILAAIDGQGFDRVMVVVTRWFGGIKLGAG
                     GLVRAYGGAAAECLRTAPRLPLVTMARLQLLAGFEDLGSLHATLPAFGAGKRDEQFDA
                     NGVCLRIELPADQVDALKIRLRDATRDRIRIEDDDQDD"
     gene            15762..17534
                     /locus_tag="QEL58_001721"
     CDS             15762..17534
                     /locus_tag="QEL58_001721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014646819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HDS1676199.1"
                     /translation="MTDKDDAPASTPPLRRLGSLRTLWPFVRRHSGLFTAWLLALAVS
                     SAATLSLPPAVKQMIDHGFSSGGQINRAFALLMLVAVVMALGTAARFYFVSLLGEKVV
                     ADLRSQLYAHLIQLGAGFHDRSRSGELVSRLTADTELLRSVVGSTMSVALRSSVTVVG
                     SLAMLFVTSPRLAAWSLLGIPLAVLPIIIGARKLRTVARNSQDRIADANSLASETLGA
                     VRTVQAHAREPYERGRFDHALGDAIKAARRRIGAQSLVTASAILLVFGAIVGVLWLGA
                     HDVIDGRLSAGTLGQFVLYALIGGGSVGALAEVWNELQRAAGGMGRIGELLQEDIEIR
                     APAQPHALPQPLRGEIQFDDVVFHYPQRPDQAALDHFTLHVRPGETVALVGPSGAGKS
                     TVLSMLLRFHDPASGRICVDGVDVRQADPAELRAQLALVPQQPTLFAASARENIRYGR
                     LQASDDEVEQAARAAEADGFLRALPQGYESELGERGARLSGGQQQRVAIARALLKDAP
                     ILLLDEATSALDAQSEYSVQQALERLMAGRTTLVIAHRLATVLKADRIVVMDQGRIVA
                     EGTHAQLLAEGGLYAELARLQFID"
     gene            17611..17805
                     /locus_tag="QEL58_001722"
     CDS             17611..17805
                     /locus_tag="QEL58_001722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010484482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676200.1"
                     /translation="MSFRQFPAVDSNGESHIIIEFKPEANGSGHHSEATPRYELDDGR
                     QLVRNGREFTTSGGELRLTI"
     gene            complement(18056..19180)
                     /locus_tag="QEL58_001723"
     CDS             complement(18056..19180)
                     /locus_tag="QEL58_001723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydrogenase"
                     /protein_id="HDS1676201.1"
                     /translation="MSDLHERTPRTVGIVGSAGAYGRWLSRFFQQHMQLQVIGHDPAD
                     PASHTPEQLLAQADVLVFSAPIRHTPALIAQYVQQSAGREQDRLWLDVTSVKEAPVQA
                     MLASQAEVVGLHPMTAPPKAPTLKGRVMVVCEARLQHWQPWVDALCAALQAECVRATP
                     QHHDQMMALVQAMVHASHLAQAGVLRQYQPQLGDLAAMMPYRSASFELDTAIISRILS
                     LNPAIYEDIQFGNPYVAPMLERLIGQLQSLQAQVGQGDDGARGAFREQLLSANRSAFG
                     EQALADGNYTFERVGYLLADLTERNALSVHLPEDRPGSLRELLNVFEQHRISLASIHS
                     SRTPGGEVHFRIGFVAGSDPAAIAAAAAKVDASGIGRVLG"
     gene            complement(19177..20085)
                     /gene="pdxY"
                     /locus_tag="QEL58_001724"
     CDS             complement(19177..20085)
                     /gene="pdxY"
                     /locus_tag="QEL58_001724"
                     /EC_number="2.7.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004153277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal kinase"
                     /protein_id="HDS1676202.1"
                     /translation="MSESLDNHLVHGRRQRPDGPSPIDVISVQSQLVYGHAGNSAAVP
                     PMRALGVRVAEIPTVLLSNAPFYDTTRGRVLPADWFADLLLGTYERGLPQRARMLVSG
                     YFGSTANGAAFADWLDEILPACPQLRYCLDPVIGDTHTGPYVEPGLEAIFAERLLPHA
                     WLVTPNAFELNRLTGMPALAEADAIAAARTLLDRGPQWVIAHSVGGNPGELVTLAVGR
                     GETWRWTSPLLPVDVAGTGDVLMSLVVSFLLRGESMQQAISRAIAGTHAALEATLDNG
                     FEEFDVIAAAPAALAEGTRFRAERVA"
BASE COUNT         3359 a         7010 c         6728 g         3291 t
ORIGIN      
        1 acggaatgct gctctggctt tggctttggc tttggcttct gcaggtgcag ggctgcaagt
       61 cctgcaacac aaaaaacccc gcttgcgcgg ggttctctgt gtgctgcgcg ccgcaggtga
      121 ttacgggcga cgggccagag cctcgacgtc cttcgccttc ggcagcaggt cctgcttgct
      181 gacgcgcagg aagccgatcg tcagcatcgg caccgccacc aggatcgagg acagcaccac
      241 gatcaccgca ccgatcatgt gcgtctcggc caggccttcc atcgagctgc cgccatacat
      301 gtacagggca agcgccgaca ggaagaacat caccgcggtg atcaccgtac gcgacagcgt
      361 ctggttgatc gaacggttca gcacttccat cgagtccacg cgcaggctgc ggaagttctc
      421 gcggacgcgg tcgaacacca cgatgatgtc gttgattgca aagcccatca ccgacagcag
      481 gccggccagc acggtcaggt cgaactcacg gcccagcagg gacacgtaag ccaccgtcac
      541 gatcaggtcg aacatcgcca cgatgctggc ggtgaccgcg aacttccatt cgaagcgcac
      601 cgcgatgtag atcaggaagc cggccagcat gaagatggtg gcgtacaggc cattcatcgc
      661 caggtccttg ccgatctgcg ggccaacgaa ctcgttgcgc agcacggtgg cctggttgtc
      721 ggcggtggac agtgccttca ccacggccgc ggcggtggcc ttgtcctcgg cagcggcgtc
      781 gccggtaccc ggggcatgct cgccgtgcgg ggccaggcgg atcagcaggt cggtgttgcc
      841 accgacactc tgcacctgcg caccgtcaaa gccgttttcc tcgagcttgg tacgcacctg
      901 ctcgacgtcc accgccttgt cgaagcgggc ttcgatcagc gtgccgccgg tgaagtccag
      961 cgcatagttg aagcccttga agccgatgat ggcgaccgag gccaggaaca ccacgatggt
     1021 gaccgccatg gcgacatggc gccagcgcat gaagtcgatc ttggtgtcgt tcgggaggat
     1081 gtgcagcgga aacagtttca tgtgcgtgtc gtcccgtcag atggccacgt tctggagctt
     1141 cttgcggctg ccgtagatca gcgtcgccag tgcgcgcgac acggtgatcg cggtgaacat
     1201 ggaggcgaaa ataccgatga tcatggtcag cgcgaagccc ttcagcggac cggtaccgaa
     1261 tgcgaacagc gccacaccga cgatcaggcc ggtcaggttg gcgtcgagga tggtgccgga
     1321 ggcacgctcg taaccggtca cgatcgcggt cttgcccggc acgccggcac gcagttcctc
     1381 acggatacgc tcgttgatca gcacgttggc gtccaccgac aggcccaccg acaacgccag
     1441 gccggcaaag cccggcaggg tcatggtcgc gccgaacatc gacatcaccg ccaccacgat
     1501 cagcaggttg aacagcatcg cgatcgaggt gatcacgccg aacatgcggt agtagatgct
     1561 gaagaacacc agggtgaaca ggaacgcgaa caccactgcg cgcataccgt tcttgacgtt
     1621 ctcggcgccc aggctcgggc cgaccacgcg ctcttcgacg aagtccatcg gcgccgccag
     1681 cgagccggac ttcagcagct tggccaggtc ctcggcttcc ttcttctgca ggccagtggt
     1741 ctggaagttc ttgccgaaca cgccgttgat gttggccacc gagatcactt cctcgttgac
     1801 cttgaagcca cgcacttcct ggccgtcgac gacggtcacg gtcggcacgc gctcggtgta
     1861 gaccaccgcc atcggcttgt tcacgttggc gctggtgaag tcgaacatgc gctggccgcc
     1921 gacattgttc agcgtgacgc tgaccgccgg cgagccactg ttcgaatcgg tcaccgcctg
     1981 cgcgccgacc atctggtcgc cggtgacaat cacgcgcttg ttcagcagca ccgggccacc
     2041 gccatcacgg cgctggtaga ccttcgcttc cggcgggatg cggccggagg cgatcgcgtc
     2101 ctgcgcattg ccttcgacca ccgcacggta ttccagggtg gcggtggcgc cgatcatgcg
     2161 cttggcttcg gcggtgtcct gcacgcccgg cagctgcacg accacgcggt cggcaccctg
     2221 gcgctggatg atcggctcgg ccacgcccag ctggttcacg cggttgcgca gggtgttgat
     2281 gttctgctcg atggcaccgt tggcgatctg ggtgatctcg gcctccggga tggtcaccgt
     2341 gatgcggctg ccgctgacgt cgtaaccgag ggtcggctga gccttgacca gcgcggtacg
     2401 ggcgagctgt gccgcgtcat caccggccga cgggctcagg ttggccacga tgctgttgtc
     2461 ggcacgacgc tccaccgact ggtaggcgat gcgggcgtca cgcagcgtgc tgcgcacgtc
     2521 ttcggtgtag gcgtccaggc gcttgtccag ggcggccttc tggtcgacct gcagcacgaa
     2581 gtgcacaccg ccctgcaggt ccaggcccag caccatcggg cgaccgccga ggttggccag
     2641 ccagtccggc acggtcgagg ccaggttcag cgccacggtg tactgctcgc cgatggtgtc
     2701 acgcagggcg tcgctggcag cggactgcgc cttcaggtcc ggcaggcgga cgatcaggct
     2761 ctccccttcc ttctcggcgc cgatggtggt gataccggcc ttgttcaggt cggccagcac
     2821 gcggtcgcgc agcgcatcgt cgacctgccc gccacggttg gcggtgatct ggatggccgg
     2881 gtccttctgg tagatgttgg gcagcgcgta cagcgcgctg agcgccagta cgatcaggat
     2941 gacgacgtac ttccagcgtg gaaattcgag cattgcttgg gtcccgcgcg gcgccatccc
     3001 cggcgccgcg gttgtgcttc ggaaagggag tggcttactg ggccgacttc agggtaccgg
     3061 ccggcagcac gttgccgaca gcgcccttct gcacgcggat gcgcacgttg tcagccactt
     3121 cgatggtgat gaagttgtcg ccgatgtcgg tgacgatgcc ggcgatgccg ccgttggtca
     3181 gcacttcgtc gccacgcttg atcttctcca gcatggcctt gtgctccttc tgccgcttca
     3241 tctgcgggcg gatcatcagg aagtacatga tggcgatcag gatgatcggg aacagcagcg
     3301 tggtcaggcc catgccctgc ggttggccgc cggcggcctg ggcgtgggcg gcgggaatca
     3361 ggaaagcaag caggttcatc gttggtcctt tggttgggcg gcgcttcggc cctttcacgg
     3421 gcacgaggtg tcgaccgcgg atctgggtca gccttgaagt atgccacggc cccgggcgtt
     3481 cgtccttggg ccgtttggca gggggtgtcc ggttacaggg gcggcgcgac cgccccccgt
     3541 gccgcgtaga aagactcacg gaaggccagg aaggttcccg cctcgatcgc cgcacggatg
     3601 tcggccatca gcttttcgta atagaacagg ttgtgcaggg tgcccagcat cggcgccagc
     3661 atctcgttgc agcggtccag gtggcgcagg taggagcggg tgtagccgcc ggtgcaggcc
     3721 acgcagccgc agcccggctc gatcgggtcc atgtcgcgcg cgtactggga gttgcggatg
     3781 cggacggtac cgaacgaggt gaaatagtgg ccgttgcggg cgttgcgggt cggcatcacg
     3841 caatcgaaca tgtccacgcc gcgtgcgaca ccctcgacca gatcctccgg ccggcccacg
     3901 cccatcaggt agcgcgggcg gtcgcccggc agttccgggt ccaggtggtc gagcatggca
     3961 ttgcgctcgt gctccggctc gcccacggcc aggccgccga tggcgtagcc gtcgaagccg
     4021 atcgcctgca gggcctcggc cgagcggctg cgcaggtcgg tatgcacgcc accctggacg
     4081 atgccgaaca gggccgcatc gttgcccagc tcgtcatgcg cgttgcggct gcgctgggcc
     4141 cagcgcaggc tcagttccat cgagcggcgg gcgacatctt cggtggccgg gtacggggtg
     4201 cactcgtcga agatcatcac cacgtccgaa tcgagcactt tctggatctt catgctctct
     4261 tccgggccca ggaatacccg ggcaccgtcg gtcggcgagg cgaaggtcac gccctgctcg
     4321 gtgatcttgc ggcgatgggc cagcgagaac acctggaagc cgcccgagtc ggtcaggatc
     4381 gggccatccc agcggcagaa gccgtgcagg ccgccgtggt cggcaatgat gtccaggccc
     4441 gggcgcaggt acaggtggaa ggtgttgccg aggatgatct cggcgcccag cgcgcgcacc
     4501 tggtccggca ggatgccctt gaccgagcca taggttccca ccggcatgaa ggccggcgtt
     4561 tccaccgtgc cacgcgggaa ggtcaggcgg ccacggcggg cacggccgtc gcgggtcttg
     4621 agctggaact gcagtcggga catggagcgg tcattcaggc aaatagtcgc ccattgtctc
     4681 ccaaaaccgg gcgccgacga acccgtgacc tgtctgcgcc gttcagcgcc ctgcccgctg
     4741 gcgccaacgc tgcgccagca ggtcggccaa ggcctcggcc tggatcgaat tcaggatgtc
     4801 gttatggttg gcggagacgc tgtcctcgcc ggcaatcacc cataccggcc gctgctgcat
     4861 cggcacgcag ccctggccgg gtatgctgac cgcgcgcagc acgaagcggc catcggccag
     4921 ggtcgcggta caggtatccg ctggcgtggg tcgacaggca tcccctgtat tgcagacctt
     4981 ggcacggtgg gtctgccgct ggcggtcaaa gccgatcggg gtatcgcgga aggcgatccg
     5041 gtagccccag cccaccgcct tgtcgccctg cgcctgcagc accgtgacct tgcgatgctg
     5101 gcgcaaagcg tctgctgccg tgatcgagac cgcgccgctg aacgccggcg atgccgccca
     5161 cgctgcgacc agcgcctgct cgaccgcgtc gaattcgcct tcggccaccg ccgggttgag
     5221 catgaagtac tcgaagccgt gcaactgctc ctgcgccagt ccgtccttga tcgcatggaa
     5281 caacgccgag ccgccaaagc tgtggccgat catgtagacc gcacgctcgg ggtgctgctc
     5341 gcgcagcatc gtcaccacct gtgccaagcc gccctcacca acggttaccg atgcgcactt
     5401 gcggtcccat acggtcagga agtcgcttgg ctcccaggtc agcggggtgt cgatggaatc
     5461 gccccgccag cccacgtaca gccccctcac cggtgttccg gccctggcct cgaccttcgc
     5521 aaggaactgg tcaaaatcgg tgaaattgct gtctttgggc gatgcgttgt ggtgccagcc
     5581 attgatgaat accaccacgg gcagctcggc cggctcctcc gccagccaat gctgcaggcg
     5641 gtcgaactgg cccggccaat ggaaccgccc cgcatcatcg atctcgatca ccatgcgctc
     5701 gctgcgcgcc ggtgcgtcga gtcgcacggc ctcgtgctcg ggccagtagg cgacatcggg
     5761 cacgctggta caggacgaaa gaccgcacac gatcaggcac aggccggcaa tccgccgcat
     5821 gagcgttctc cttggtgggg cacaggcccc tccccggggc ctgcgcgctg cgatcctagc
     5881 ctgcggtcac gggcactgga cgaccgcctg tcggaaggtc cagactgccg ctgcgatgta
     5941 tcgaaccggg gggaacgatg ctgcacccag cactgcgggc cggctgcctg attctggccg
     6001 ctgccctggc ctgcgcgccc tgcgcggcct tcgaactgca gatggtgacc cgtgcccaag
     6061 ccaaggatct gcgcaccagg ctggaccagc ttggcgttcg cggcgtctcg ttgcagatga
     6121 tcctggatag cggctacgag cccgtgcacg agcgcatcat gctgatgtcg tacggctgcc
     6181 ccggccaacc atcctgcgcg gcccattccg agcgcggcca tatcagcatg gggctgcaat
     6241 ggaacgacaa tcccccggat gtgccctccc ttggcgcctg ccaggggaag gtagtgatga
     6301 tgccgcaccg gagcggaaac tgctggctgg ctcatatgct gaaggccaag cgcaatcccg
     6361 atgccggtta cggcgaagcg tcactgatgg cgcagcgctc gcactacggc gacatgcagt
     6421 tcctgcatgc catggcgagc gagcccggcg aagcggcgtc gaccacgctg gaacacatga
     6481 tggcctgggc cgagtacagc taccgccttt ccctgcgcgg aggcctggag cagttggatg
     6541 tggaggcacc ggtacgtcag ttcgccggcc tggcgccctg gttccaggcc gaaaagcgcc
     6601 actggaccgg cgccgacctt ttcatgttcg gccacgagta cgacgaacca ttgatacgcg
     6661 acatggcatt cggctccctg ctgcatctgc tgcaggattc ctactcgcag agtcatgtcc
     6721 agcgcgacta cgctgccgat ggcttaccca tcgaacgcct gttgacctat cgcgggcagt
     6781 ccagccactg ccacgccaag gccgatcgca agggcccgga gggaaagaag ccgctggcgg
     6841 ccaacctgcg cgcggcgatc gagatgggtc gcgagctgat cgcactccgc gaacgtactg
     6901 caccgtggac ggaggccgaa ggcctgctac gtggcagcgc cttccgcctc gcggcggacg
     6961 tgcagccagc cggcaccggg gcgttcacca gcaagaactg caagtagcag gcgcggcgcc
     7021 tcaacccgcc tgcgggaaca gcagcatcgc gtcgccgtag ctgaagaagc ggtagcgctg
     7081 ctcgatcgcg tgctggtagg cctcgaacac gcggtccttg ccggcgaacg cggagatcat
     7141 catcagcagc gtgctttccg gcaggtggaa gttggtcacc atcgcgtcga cgctgcagat
     7201 gcggtagccc ggggtgatga agatctgcgt ctcgccagcg aacggcagca gctcgccatc
     7261 gcgcatcgcg ctttccagcg cccgcacgac ggttgtgccg acgccgatca cccggccacc
     7321 ggccgcacgc gtgcgccgca cctgctgcac cagctccgcg ccgacgttca gccactcgcg
     7381 gtgcatcacg tggtccttca ggtcatcggc acgcaccggc tggaaggtgc ccgcgcccac
     7441 gtgcagggtg acgtggccga agtccacgcc cttctccttc agcgcggcca gcagcggttc
     7501 gtcgaaatgc aggccggcag tcggcgcggc caccgcgccc acttcacgcg cgaacacggt
     7561 ctggtaacgc tcgcggtcgt ccacgcccgg ctcgcgctgg atgtacggcg gcaacggcag
     7621 gcggccggca tgcagcagcc actgctccag tgactcgggc acatggaact gcagcacgta
     7681 gaactcgccg tcgcggccca gcacctccgc ttcgccgccg gcatccagcg cgatgcggct
     7741 gccggccttc ggcgacttgc tggcacccac ctgcgcacgc gcctgctggc cgccgagcag
     7801 gcgctcgatc aggatctcca cgcggccacc gctggccttc tgcccgaaca ggcgggccgg
     7861 aatcacccgg gtgtcgttga acaccagcag gtcgcccggc tgcagctgtg acggcaggtc
     7921 acgcacctgc aggtcggtga agcctgccgg ggcgggtggc accagcagca ggcggctggc
     7981 ggaacgttcg gccaggggcg cctgcgcgat cagttcggcc ggcaggtcgt agttgaaatc
     8041 ggacttcttc aaggcagtgg gcggcaacag gtcgacaatg gcgcgcattg tacgtccagc
     8101 gtctgcgagc cggcgcgctt cgcggcgaac gtcgtgcaaa atgctgctat gcagcaggtt
     8161 tctgcggggt tatcgcgcaa aaaaacaagt gctagcatcg agccggaagt ccgctgcacg
     8221 agcctgcccc caagcgcgcg tgatgacgcg cgttttgctt ttgaagaccc gtgcgaccca
     8281 ttgtttcagg agatctgcaa tgagcttcat cgaacgcctc gcccccctgc gcaaccagcc
     8341 cggcacccgc ctcactactg gcctggacga cgccaccctg accgccctgt ccgcccgcca
     8401 tccgcagctg gttgccgcgg tggaggctgc cgccgaggaa ttcgcgcgcg tgcaggccga
     8461 cctggggccg ctgctggcgc aggacgagca ggcgcagatc gacgcgatgc aggacggctt
     8521 cgtcaatttc tacgccgatg acgcagtgac cccatatgtg gcgctggccg cgcgcggtcc
     8581 ttgggtggtg accctgaagg gtgcggtgct gtacgacgcc ggcggctacg gcatgctcgg
     8641 cttcgggcac accccggatg ccgtgctgga ggcgatggcc cgcccgcagg tgatggccaa
     8701 catcatgacc ccgagcctgt cgcagcagcg tttcatcacg gccctgcgcg ccgagatcgg
     8761 ccatcgccgt ggcggctgcc cgttcgcccg gttcatgtgc ctgaactccg gctccgaggc
     8821 ggtcggcctg gcggcccgca tcgccgacgt caacgccaag ctgcagaccg acccgggcgc
     8881 ccgccacgct ggcgcggcaa tcaagcgcgt ggtggtcaag ggcagcttcc atggccgtac
     8941 cgaccgcccg gcgctgtact cagattccag ccgcaagagc tacatgcagc acctggccag
     9001 ctaccgcggc gaagactcgg tgatcaccgt tgcgccctac gatgaggctg gcctgcgcaa
     9061 ggtgttcgaa gatgctgcgc gcaaccactg gttcgtcgaa gccgtgttcc tggaaccggt
     9121 gatgggcgaa ggcgacccgg gccgttcggt gccgccggcg ttctatgcgc tggcccgtga
     9181 actgacccgt gcacacggca gcctgctgct gctcgattcg atccaggccg gcctgcgcgc
     9241 gcatggcgtg ttgtcggtgg tcgactaccc gggcttcgaa ggcctggacc cgccggacat
     9301 ggagacctac tccaaggccc tcaacgctgc acagtacccg ctctcggtgc tggcggtgac
     9361 cgagcatgcc gcgcagctgt accgcaaggg catctatggc aacaccatga ccagcaaccc
     9421 gcgtgcactg gatgtggcct gcgccaccct cgcccagctg accccgcagg tgcgtgccaa
     9481 catcgccgaa cggggtgccg aagcggtgcg caagctggag cagctgaagg gcgaactggg
     9541 cgggctgatc accaaggtgc agggcaccgg cctgctgttc tcctgcgagc tggccccgca
     9601 gttcaagtgc tacggcgcca attccaccga ggaatggctg cgccagcacg gcatcaacgt
     9661 gatccacggc ggcgagaact cgctgcggtt caccccgcac ttcggcatgg acagcgaaga
     9721 gctggacctg ctggtgggca tggtcggccg cgccctgcgc gaaggcccac gccgcgagca
     9781 ggccgccgca gcgtaagaac gcccaacgcg tcatactcca tggatacccc gcccgcaacc
     9841 gctgatccgg ttgccggcgg ggcgttttcg tttccggcct agagacagga agatccatga
     9901 aatcgatctg tgtgtactgt ggttccaacg cgggcagcaa gccggcctac accgaacgcg
     9961 ccattgccct gggtgaccgc atcgcccgcg acggcctgcg cctggtgtac ggcggcggca
    10021 acgtcggcct gatgggaacc gtggccaacg ccgtacttgc cgccggcggt gaagtaaccg
    10081 gcgtgatccc gcgccagctg gccgactggg aagtggccca tcgcggcctg accgaactgg
    10141 aaatcgtcgg ctcgatgcac gagcgcaagt cgcgcatgtt cgacctggcc gatggcttcg
    10201 tggccctgcc cggcggcttc gggacaatgg aagaaatctt cgagatgctg acctggcgcc
    10261 agctgggcat cggcaacaag ccgtgcgcgt tcctcgatgt ggatggcttc tatgcaccgc
    10321 tgatcggcat gatcgatcgc atggtggagg agcgcttcct gcatccggac cagcgccagg
    10381 acctgtggta cggctcggac atcgaggaga tgctgacctg gatgcagaac taccagcctg
    10441 cccaggcctc gaagtggatt gacgaaaaac gccgcgccgc cctgcgctga tgcaacagca
    10501 cgcggcggct caggccaccg cgtgcacccg gggcgcaggc cggcccagca ggtagccctg
    10561 gccgtaatca cagccgagtt cgcgcagggt ctgccgctgc gcctcggtct cgatgccttc
    10621 accgatggtc tcgatgccca gcgtgcgcgc cagcgacagc acgccttcaa ccagcgcgcg
    10681 cgtgctctgc acttccgggc cgtgcaggcc ggcgatgaaa ctctggtcga tcttcaacgt
    10741 gctgatcggg aagcggtgca ggtaggacag cgccgagaaa ccggtaccga aatcgtccag
    10801 ctgcacctgg atgccacgct cgcgcaggcc ctgcaggatg cgcagcgtat gcgggccatc
    10861 gtccagcagc gccacctcgg tgatctccag gcgcagcctg cgcggatcgg caccgcaggt
    10921 gtcgagcagg ccgaacaggc gatcactgaa ttccgccgaa cggaaatggc gcggcgacac
    10981 gttcaccgag acgtagccct ggccgccctt gcccaggccg gcgatgacct gctcgtagat
    11041 cagccagtcg acctgttcga tcagcccgct ttcctcgccc agttccagga atgcacccgg
    11101 cagcagcagg ccacggcgct cgtgctgcca gcgcagcagc gcttcgtgcc cgaccacttc
    11161 gccatcggac aggcgcacga tcggctggta gaagggaacg aaatcgcggt tgttgatcgc
    11221 gcggcgcaga tcggcttcca ggtcgaggct gcgcattgcc tgttcgcgca tgtcctcatc
    11281 gaagatcgag caacgatcgt ggccctgtgc cttggcccgg tacatcgcgg catcggcatc
    11341 gcgcagcagt tcttcaccgg tgcggtagcg cgggttccac aaggcgatgc ccaggctgcc
    11401 ggacgggaac agctcgcgcc cggcgatcca tatcgattcc tgcagcgcca gcagcaaccg
    11461 ctggccgaag tccaatgcct gtgccaggcc ctgcgggcac tgcagcaaca cggcaaactc
    11521 gtcgccaccc agccgcgcca ccacatcctc ggggccggcc atcgacacga tgcgcttggc
    11581 cacttccacc agcatgcggt caccggccgc atggccgatg ctgtcgttga ccagcttgaa
    11641 acggtccagg tcgaggaaca gcacggcgaa caccgggccg ccctcgcgcc tggccagcgc
    11701 cagcgcatct tgcaggcggt cgagcaggtg caaccggttg ggcaggccgg tcaacgcgtc
    11761 atgcatggcc tgatgggtca ggcgctgttc ggcacgcagg cgctcgccga tctggccgag
    11821 cagtttttcg ttcacctcgg ccagttcgcg ggtacgctcc tccacccgct tttccagctc
    11881 ggcatgcgcc gagcgcagcc gctgctggtc tcgctggcgg gccaggccgg tgccgatgtt
    11941 ctgcgcgacg aaggtcagca ggcgctggtc gtgcacgctg aacgtgctgt tctcgctgta
    12001 gctctgcacc acgatcgcgc cgaccacttc atcgtcgcgc agcaggggca cgcccagcca
    12061 gcaatgcgag cgggcgccgg attcgcgcac ttcgccggtg gccagcagcg cgtcgatctg
    12121 cgcacgcgag gccagcagcg ggcgccggtt gcgcaccacg tactcggtca ggccgcggct
    12181 gaacggccgt ggcgcacgac tggcattgtg ctcgtccacc gaatagacga aatccagtcc
    12241 attgcccgcc gggttgacca gtgcgatgta gaagttgcgc gcatcaagca ggcgcccgac
    12301 cacgccatgc acctgcccgt agaactgggc caggctgtcg gccgacatcg ccatctcggc
    12361 aatgttgtac agcgcggtct gcagctgttc ggcgcgacgg cgctcggtca cttcatcctg
    12421 caggctgtgg ttggcgcgct gcagttcttg cgtgcgcctt tccacctgct gctccagccg
    12481 tacctgcgcc tggcgccggt ccatggcggt ctgcacgtgc tgggccacga accccagcag
    12541 ggcccgctcg gcctcaccat agcgggcagc ctgttcatag ctctgcacca cgatggcgcc
    12601 gcatacgcgg ccatcgcgca gcatcggcac gcccagccag tccaggcttt ccggcccgcg
    12661 ctgggggtcg tgctcctgct ccatcacccg cgccagcagt tcgcgcgacg ggccactgag
    12721 cggcctgcca tggcgcagca gcgctacggt cagactgcga ggcatctcgc tggcggcgtg
    12781 gctctgcgat ggatcggcaa cgaaatcatc cacctggtcg gcgaagtaca ggaagcggat
    12841 ctggtcccgc acatcgtcgt actcgacgat gtagcagttc tccgcgtaca tcagcgtgcc
    12901 cagcacgccg tgcacgtggc gcagcatctc gcccatctca aggtcggcac cggccaggtc
    12961 ggcgatctgg aacaacgcct gctgcaggcg ctcggcctct tccagcgcct tgatctgccc
    13021 ggcctggcgg ccacgctgca gggccagttc catcgcctgc cgggccagcc cccaccacgc
    13081 ggacgagggc gccgcgccgg ccaccgacag cagcagccgc gcaccgtcgt actcccagcc
    13141 gtgctggcca tcgccgatgc caggttcccc ggaggcgcac cccgtcaccg ccagcaaggg
    13201 ccatccgccc tggccacagc ccagctgcgg gtcatcccag cccacgcgga ccaccgccga
    13261 ttccggcaac agcgcatgca gcgcgcgcac cagcgccgtg ctcagcacga cctcgtgtgg
    13321 tggctcttcc gccggttcag catacgtgga caaatgacaa tctcttggcg ccgtctgtgc
    13381 gtcgcctccc ctgagccgtc gagcatagcg cgccacccgg ggggcaatgg aagcccgcaa
    13441 accccgaatc gtgcgcccgt acgtttttcc tgctgtccgt agccccttgc gcgccatgaa
    13501 ccctgccctg cccgccctcg ccaccggcta tgcgccatcg cctgcaggcc ttaccctgta
    13561 cgccgtggaa gccagcgcat tgccaaccga tgaagccttg atgctggcct gggccggtgg
    13621 cgacctgcgc gcgttcgaaa gcctgtatgc gcgccatcgc aagcggctgt tcggcttcct
    13681 gctgcggcaa ctgcgcgaca acgcgctggc cgaggagatc ttccaggacg tctggcagcg
    13741 ggtgatcagc gcccgcgccg gctggcagcc cgaggcggca ttcagcacct ggctgttccg
    13801 catcgcccat aaccgcttga acgatcactg gcgtgccgcc cgccatcgtc cctccgcacc
    13861 ggccgacgcc gacctgcgcc tggccgccat cgaggatggg cagaccccgg aagccgaact
    13921 ttccgaattc gaacaacgtc gccgcatcca tctggcgatg gaacaactgc cgcccgagca
    13981 gcgcgaagtg ctgcagctgc ggctggatca ggaactgagc ctggaggaga tcggccagat
    14041 caccggcgta ggccgggaaa cagtgaaatc gcggctgcgc tatgcgatgg acaagctgcg
    14101 tgcgggattg aacgcatgaa ccgagacgaa ccgctgacgc cggaagaacg cgagctggcc
    14161 cgcctgctcg gccgtcgcgc cgaacaggcg ccgccggccg cgctcgacgc cgccatcctg
    14221 gccgcggcgc gcgccgccgt ggacgcaccg gccgccgcaa ccgccgcctc cccggaagca
    14281 ccccgcgcac ggcgctcacg ctcgcgctgg ccggccgtgt tcggtatcgc cgcctcgatg
    14341 gtgttcgcca tcggcatcgc ctggcaactg cgcccggaac caccgccggt cccggcaggt
    14401 gaagcagccg tcgctgcagc acctgctgct gccgagatcg cagccgacgc gccgcctgct
    14461 gcaggcggcg ccgcggaccg tacggcggca gccgcagaac cggctgtacc gccggcaacg
    14521 cccgaggctg ctccgatggc tgctccgatg gccaccccca cgcccgcacc ggcttccgcc
    14581 gcgcgtgcac ccgcagtggc ggcagcaccc aagcctgcac ccgtggacgc accggcacgc
    14641 gccgcgcgct caagggcggc agaggccgcc gccgatacgc cttttgccac accgtcagcc
    14701 gcaccagcag cggctccgcc tgcgccaccg gccccggcag cctactcggc acctgctccg
    14761 gcattcgcgc ccgctccggc agcggcgctc aaggcacgca cggccgaagc ggccatggac
    14821 aacgccgcag ccaacgccga gccggcgcag gcactggatc gggtacagat cacctcgatg
    14881 aagcgcgagg ccgccagccg ttccgcggcg ggcgtcatgc gccgcagcag cgatgccagc
    14941 ctgagtgccg atgcggtgca ggcagaagtc ggcgccgacg cgcgcctgcc acgccggcag
    15001 tggctggaaa aaatccgtga gcgccgcgat gcgggccagc gcgaccttgc ccgcgccagc
    15061 ctggaacgct acatcgagca gtatccagaa tcgcgcctgc cgcgcgacct tcgcccgttg
    15121 ctggacgact gagacccacg gaggtcgggc gcaacaccgt agaatggtgg agatgcccga
    15181 taccctcgcc cagccggtca gtcacacgct ggaagtcaag cacagccgct tcattgccca
    15241 tgccacgccg attgatggcg ccgcggcggc gatggcgttc ctgcagcagg ttgcagtggc
    15301 cgatgccacg cacaactgct gggcttaccg ccatgggcag gactaccgct ccagcgacga
    15361 tggcgagccc gcaggcaccg ccgggcggcc gatcctggcc gccatcgatg gccagggttt
    15421 cgaccgggtg atggtggtgg tgacgcgctg gttcggcggc atcaagctcg gtgccggcgg
    15481 cctggtccgc gcctacggcg gtgccgccgc cgagtgcctg cgcaccgcgc cacgcctgcc
    15541 gctggtcacc atggcccgcc tgcagctgct ggccggcttc gaggacctgg gcagcctgca
    15601 tgccaccctt cccgcctttg gtgccgggaa gcgtgatgaa cagttcgatg ccaatggcgt
    15661 gtgcctgcgg atcgaattgc ctgccgatca ggtcgacgca ttgaaaatcc gcctgcgcga
    15721 cgccacccgt gaccgtatcc gcatagaaga cgacgaccag gatgactgac aaggacgacg
    15781 cccccgcttc gaccccgccg ctgcgccgcc ttggcagcct gcgcacgcta tggccgttcg
    15841 tgcgccgcca cagcggcctg ttcacggcct ggctgctggc cctggctgtc tcttcggccg
    15901 ccacgctgag cctgccaccg gccgtgaagc agatgatcga ccacggcttc agcagcggcg
    15961 gccagatcaa ccgtgccttc gccctgctga tgctggtggc ggtggtgatg gcgctgggca
    16021 ccgccgcgcg cttctacttc gtgtcgctgc tgggcgaaaa ggtcgtcgcc gacctgcgca
    16081 gccagctgta cgcgcacctg atccagctgg gcgccggctt ccacgaccgc agccgcagcg
    16141 gtgagctggt ctcgcgcctg accgccgaca ccgaactgct gcgcagcgtg gtcggttcaa
    16201 cgatgtcggt cgccctgcgc agcagcgtaa ccgtggtcgg cagcctggcg atgctgttcg
    16261 tcaccagccc gaggctggca gcgtggtcgc tgctcggcat cccgctggcg gtactgccga
    16321 tcatcatcgg tgcgcgcaag ctgcgcaccg tcgcgcgcaa cagccaggac cgcatcgccg
    16381 atgccaacag cctggccagc gagaccctcg gtgcggtgcg tacggtgcag gcccatgccc
    16441 gagagcctta cgaacgcggc cgcttcgacc atgcgcttgg cgatgcgatc aaggccgcgc
    16501 gccgccgcat cggcgcgcag tcgctggtca ccgccagcgc catcctgctg gtgttcggcg
    16561 ccatcgtggg ggtgctctgg ctgggcgctc acgacgtgat cgacgggcgc ctgagcgccg
    16621 gcacgctggg ccagttcgtg ctgtatgcgc tgatcggcgg tggctcggtc ggcgcgctgg
    16681 ccgaagtctg gaacgagctg cagcgggcgg ccggcggcat gggccgcatc ggtgaactgc
    16741 tgcaggaaga catcgagatc cgtgcgccgg cacagccgca cgcgctgccg cagccgctgc
    16801 gtggcgaaat ccagttcgac gatgtggtgt tccattaccc gcagcggccg gaccaggccg
    16861 cgctggacca tttcaccctg cacgtgcggc ccggcgaaac cgtggccctg gtcggcccgt
    16921 ccggcgccgg caagagcacg gtgctgtcga tgctgctgcg tttccacgat ccggccagcg
    16981 gccgcatctg cgtggatggc gtcgacgtgc gccaggccga cccggccgaa ctgcgcgcgc
    17041 agctggcact ggtaccgcag cagccgacgt tgttcgcggc cagtgcgcgc gagaacatcc
    17101 gctatggccg tctgcaggcc agcgacgacg aggtcgagca ggccgcacgc gcggccgagg
    17161 ccgatggctt cctgcgtgcg ttgccgcagg gctacgaaag tgaactgggt gagcgcggcg
    17221 cccgcctctc cggcggccag cagcagcgcg tggcgattgc ccgtgcgctg ctgaaggacg
    17281 caccgatcct gctgctggac gaagccacca gcgcgctgga cgcgcagagc gagtacagcg
    17341 tgcagcaggc gctggagcgg ctgatggccg gccgcacgac gctggtgatc gcccaccgcc
    17401 tggccaccgt gctcaaggcc gaccgcatcg tggtgatgga ccagggccgt atcgtggccg
    17461 agggcacgca cgcacagttg ctggccgaag gcggtctgta cgctgaactg gctaggctgc
    17521 agttcatcga ttgatgacgg tcgcctaaca tcggccggac caagctggcg accaaaagca
    17581 gcgttcgcag tccgtagaag gaggtgcacg atgtcgttcc gtcagtttcc cgccgtcgac
    17641 agcaatggcg aaagccacat catcatcgag ttcaagcccg aggcgaatgg cagcgggcac
    17701 cactccgagg ccacgccgcg ctacgagctg gatgatggcc gccagctggt gcgcaacggc
    17761 cgcgagttca ccaccagtgg cggcgaactg cggttgacga tctgaagttt gccgggcatg
    17821 gcccggcgcc accggattcc gcatcgcccc gcgctgggga ttccgcatcg ccccgctctg
    17881 gtaggtgtcg accttggtcg acacgctttt tgccaaggca gtcgagcatg gctcgacgct
    17941 acaaagaggt gtggccaatt tatcgccagg catcttgaca gccttgcgga ccaaggcctg
    18001 cgcgcggtta tccacatgtt tgcgcagaaa tcatccacac tgcctgtgga tgaattcagc
    18061 ccagcacccg gccgatgccg ctggcgtcca ccttggccgc cgccgctgcg atcgctgccg
    18121 ggtcgctacc cgccacgaac ccgatacgga aatgcacttc gccgcctggc gtgcgcgagg
    18181 agtggatcga ggccaggctg atgcggtgct gctcgaacac attcagcagc tcacgcagcg
    18241 aaccgggccg gtcttctggt agatgcaccg acagcgcatt gcgctcggtc aggtccgcca
    18301 gcaggtagcc cacccgctcg aaggtgtagt tgccgtcagc cagtgcctgc tcgccgaagg
    18361 cgctgcggtt ggccgacaac agctgctcac ggaatgcgcc gcgtgcgccg tcgtcgccct
    18421 gcccgacctg tgcctgcagg gactgcaact ggccgatcag ccgctccagc atcggcgcca
    18481 cgtacgggtt gccgaactgg atatcttcgt agatggccgg attcaacgac aggatgcgcg
    18541 aaatgatcgc ggtatccagc tcgaacgacg ccgaacgata cggcatcatc gcggccagat
    18601 cgcccagctg cggctggtac tggcgcagca cgccagcctg ggccaggtgg ctggcatgca
    18661 ccatcgcctg taccagcgcc atcatctggt cgtggtgctg cggggtggcg cgcacgcact
    18721 cggcctgcag cgccgcgcac aacgcgtcga cccacggctg ccagtgctgc agccgcgctt
    18781 cgcacaccac catcacccgg cctttcagcg tcggtgcctt gggcggcgcg gtcatcggat
    18841 gcaggccgac cacttcagcc tgcgaggcca gcatcgcctg caccggcgct tccttcaccg
    18901 acgtcacgtc cagccacagg cggtcctgct cgcgccccgc cgactgctgc acgtactggg
    18961 caatcagcgc aggcgtgtgc cggatcggtg ccgagaacac cagcacgtca gcctgcgcca
    19021 gcagctgctc cggcgtgtgc gaggccgggt ccgctggatc atggccgatc acctgcagct
    19081 gcatgtgctg ctggaagaag cggctcagcc agcgcccgta ggcgccggcg ctgccgacga
    19141 taccgaccgt gcgcggcgtg cgttcgtgca gatcgctcat gccacgcgtt cggcgcggaa
    19201 gcgcgtgcct tcggccagtg cggcaggcgc cgcggcgatc acgtcgaact cttcgaagcc
    19261 gttgtccagg gtcgcctcca gcgctgcatg ggtaccggca atggcgcgcg agatcgcctg
    19321 ctgcatcgat tcgccgcgca gcaggaacga caccaccagt gacatcagca catcgccggt
    19381 gccggccaca tccaccggca gcaacggcga ggtccagcgc caggtttccc cgcgaccgac
    19441 cgccagggtc accagctcgc cggggtttcc accgacgctg tgcgcgatca cccattgcgg
    19501 accacggtcg agcaacgtac gggcggcggc gatggcatcg gcctccgcca acgccggcat
    19561 gccggtgagg cggttcagtt cgaatgcatt cggcgtgacc agccaggcat gcggcagcag
    19621 gcgctcggcg aagatcgctt ccaggccagg ctcgacatag ggcccggtat gggtatcgcc
    19681 gatcaccggg tcgaggcagt agcgcagctg tgggcaggcc ggcaggatct cgtccagcca
    19741 gtcggcgaac gcggcaccgt tggcggtact gccgaagtag ccggacacca gcatcctggc
    19801 ccgctgcggc aggccgcgtt cgtaggtacc gagcagcagg tcggcgaacc agtcggcggg
    19861 cagcacgcgg ccgcgggtgg tgtcgtagaa cggcgcgttg ctgagcagca cggtcgggat
    19921 ttccgccacg cgaacgccga gcgcgcgcat cggcggaacg gcggcgctgt tgccggcgtg
    19981 gccgtagaca agttgcgact ggaccgagat gacatcgatc ggcgatgggc cgtcgggccg
    20041 ctggcggcgg ccgtggacca ggtggttgtc aagggattcg ctcatgccag cattctacgc
    20101 ccggtggagg gttcggcagg gcttgcagcc ctgcacctgc ttgcaagcca ggtcaacgtc
    20161 aacgtcaaaa gcgggcattc cgtgggatgg cgggacggtg tcagagtgcg gggacgccgc
    20221 aagtacgtcc ttgtaggctt ggcagccgca tccatgcggc tgacaccccg cactccgaca
    20281 ccgccccacc tctgacagat tccgtgtgct gttggtaggt gtcgaccttg gtcgacacat
    20341 ctgtgagaca tcgaatgaat tcatccgtgt cgaccaaggt cgacacct
//
LOCUS       DAOKIP010000055        20204 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.055,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000055 DAOKIP010000000
VERSION     DAOKIP010000055.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 20204)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20204)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20204
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.055"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..571)
                     /locus_tag="QEL58_001725"
     CDS             complement(<1..571)
                     /locus_tag="QEL58_001725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014036077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="redoxin domain-containing protein"
                     /protein_id="HDS1676203.1"
                     /translation="MTRKTPLLLLPLALALALAACKPAQEPAPASSQPPAQAPAPSTP
                     APVEETPAERTTAEFPALKMKAVDGSEYDLAAHRGKWVVVNFWATWCAPCRKEMPELS
                     ALHAMRSNIEVVGLAYEDIEAPEMQAFLTKHPVTYPIVIVDPFDPPADFATPRGLPLT
                     HLLDPQGKLAHSFLGPVTAADIEKQIAASK"
     gene            complement(568..1842)
                     /locus_tag="QEL58_001726"
     CDS             complement(568..1842)
                     /locus_tag="QEL58_001726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019338135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihY family inner membrane protein"
                     /protein_id="HDS1676204.1"
                     /translation="MEPLDTLNLWMERARDRARAISFGRFLWHRFLDDRLFQAAAALA
                     YTTVFALVPLAIVVFGVLSAFPVFDRWSDQLSDYVFSNFVPNAARAAEGYLRQFSASA
                     GQLTAAGFIALVVSLLITLNSVEETFNQIWRVGSTRPKLTRFLVYWTVLTLGAMLAAA
                     SLAVSARVFAMPLFGTQEGRWLAELALRLAPILIEFVCITLMFRVVPHHTVKWRHAVP
                     GAILAAVILELVKWGIGAYLGSFQSYQKLYGTVAFVPILLLWIYLCWVAVLLGASLSS
                     SMAAFRYQPVELRLPQGYEFYGLLRLLGRFHHARLKGRGLADDEILRLEPMLTDSLLH
                     DLACNLQEIGLLRRDEQGEWLLSRDLDQVSLADLYECTQLRIPVAEQHLPYRDDSLGR
                     AALAALDDLRLPLRERLKRKVSDIYTDSGDTP"
     gene            1920..2513
                     /gene="wrbA"
                     /locus_tag="QEL58_001727"
     CDS             1920..2513
                     /gene="wrbA"
                     /locus_tag="QEL58_001727"
                     /EC_number="1.6.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H:quinone oxidoreductase"
                     /protein_id="HDS1676205.1"
                     /translation="MGEILVLYYSRGGSVARLARQIARGIGEVPGMTARLRTVPPVAA
                     VTQTAQPPVPDDGAPYVSVQDLVECQGLLLGSPTRFGNMAAPVKHFLDGLGAEWVNGT
                     LSGKPAGVFTSTASMHGGQESTLLSMQVPLLHHGCLIVGIPFTEPALSHTTSGGTPYG
                     ASHVAGAADDPQPTDDEAVLARALGRRVADIAQRLGR"
     gene            2510..2845
                     /locus_tag="QEL58_001728"
     CDS             2510..2845
                     /locus_tag="QEL58_001728"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005408180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2069 domain-containing protein"
                     /protein_id="HDS1676206.1"
                     /translation="MSAAPRTVLLLALMGLAALFAGWFINDKHWLATQLVFTAPPLAL
                     AVALRLGWRKAGFWASVLALGWFSHGVMSAWSHPETRWLALIEIALALLVIFSASLPG
                     LRARFGKRR"
     gene            2925..3410
                     /locus_tag="QEL58_001729"
     CDS             2925..3410
                     /locus_tag="QEL58_001729"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003488754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparaginase"
                     /protein_id="HDS1676207.1"
                     /translation="MEELLVVTTGGTIDKIYFDDKSDYQIGDPQIGMILRELGVTFRF
                     NVIPILRKDSLHINDEDRELIRATIAAQPTRHVLVTHGTDSMVQTGKVLATIPDKTIV
                     MTGALSPARFRGSDAEFNIGCAIGAVQSLPTGVYIAMNGRIFDPQHVRKNVAANRFES
                     V"
     gene            complement(3602..5341)
                     /locus_tag="QEL58_001730"
     CDS             complement(3602..5341)
                     /locus_tag="QEL58_001730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019338133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family serine peptidase"
                     /protein_id="HDS1676208.1"
                     /translation="MSQVTQPRVRRVWVVLGASVLSSLLLATPALAGDVQLSGLQSAP
                     THQRFIVKYRDGSAPVANTTALASSLKTAAAGLASSQGRALGLQEVRKLAVGPTLVRT
                     DRPLDQAESELLMRKLAADPNVEYVEVDQIMRATLTPNDTRFSEQWGFGTSNASINVR
                     PAWDKSTGTGVVVAVIDTGITNHPDLNANILPGYDFISDAAMARDGGGRDSNPNDEGD
                     WYGANECGPGIPASNSSWHGTHVAGTVAAVTNNSTGVAGTAFNAKVVPVRVLGKCGGY
                     TSDIADAIVWASGGTVSGVPANANPAEVINLSLGGGGSCSSTYQNAINGAVGRGTTVV
                     VAAGNSNTNVSSSVPANCANVIAVAATTSAGARASFSNYGAGIDISGPGQSILSTLNT
                     GTTTPGSATYASYNGTSMAAPHVAGVVALMQSVAPSPLSPAQVESIIKSTARPLPGAC
                     SGGCGAGIVNADAAVAAAINGGGPNPGGNVLQNNVPVTGLGAATGAELNYTVAVPAGS
                     TQLRVAISGGSGDADLYVRQGSAPTDTTYTCRPYLSGNSETCTINSPAAGTWYVRVKA
                     YSTFSGLTLNAQY"
     gene            complement(5719..6741)
                     /locus_tag="QEL58_001731"
     CDS             complement(5719..6741)
                     /locus_tag="QEL58_001731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004144919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HDS1676209.1"
                     /translation="MTLLPRLIAVLVLALPALGGRAATSDPRQQGAALTTQFYEGHID
                     ALWERMTPQMQAALQSRQNLVALREQVISGWGAETEVVSEKVGSADGNDTYLRQVRFE
                     KRPGIVQVLWALDAEGRISGFYIRPEQASPPQAAASRFLDYTTRTRLQLPFADEFFVF
                     WGGRSIEQNYHAAHAGQRFALDLLMVREGRSHRGDGLRNEDYFCFGRPILAPADGTVV
                     EVVDSVADNVPGQMNAAQLTGNRVILDHGNDEYSVLAHLRQGSVRVAQGQVVRSGAHL
                     ADCGNSGNSSEPHLHYQLQAGPAFGVGVALPAQFSDYLADGQPVARGEPVKGQQIRPA
                     GVAQAQ"
     gene            complement(6743..7078)
                     /locus_tag="QEL58_001732"
     CDS             complement(6743..7078)
                     /locus_tag="QEL58_001732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010481771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HDS1676210.1"
                     /translation="MSRLPDARTLLQLDRLIHEPARLLILSILAGAESAEFGFVEHLS
                     GLSKGNLSSHLSKLEAAGLVAIDKTFRGKRPLTTLQLTPVGRQALTEYRTQLAAIVAG
                     IPVPDRKEP"
     gene            complement(7075..7731)
                     /locus_tag="QEL58_001733"
     CDS             complement(7075..7731)
                     /locus_tag="QEL58_001733"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019338131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676211.1"
                     /translation="MQQPSVIDPSSRLQALTREYSRYSRSAGGLSAMAGGVACLASFL
                     AGALLPTTLALRIVLIAMPVLWIVGKQWLAHRYYQRLGQVEEQVTPVERNFQRFFIAF
                     TALVSVLVVGSVLTHLAPMGERPWDLRALGYLGVVAMLPWVVWRWLRTPLEFIVGVFL
                     MCQAALAFTGQTYGFEPSTAVFPLASIALIVVGWRDHQRFLRLQAEMRMFMAGRAHPE
                     "
     gene            complement(7901..8995)
                     /locus_tag="QEL58_001734"
     CDS             complement(7901..8995)
                     /locus_tag="QEL58_001734"
                     /EC_number="2.6.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004154341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid aminotransferase"
                     /protein_id="HDS1676212.1"
                     /translation="MSQSIPSFAVTRSDHPRSAEERAQILEKPGFGLHFTDHMVEVRW
                     DKDAGWHNANVRAYGPLQLDPAAAVLHYGQEIFEGIKAYRHADGSIWTFRPDANGRRL
                     QRSAQRLALPELPVEIFAESLKQLIAVDSAWVPSADESSLYFRPFMIGDEAFLGVRGA
                     HKAGYYVIASPAGPYFAKGVAPVSIWLSTEYARAAKGGTGAAKCGGNYAASLLPQQKA
                     QAQGCSQVLFLDPVEGKYLEELGGMNVFLVYKDGTLVTPELSGSILEGITRESILQLA
                     RDRGMKVEERKVSIDEWKDGVASGAISEVFACGTAAVVTPIGQLKGEGFSVGDINAPA
                     GEVTMSLRKELTDIQYGRLPDRHNWLVKLG"
     gene            complement(9055..9606)
                     /gene="sufT"
                     /locus_tag="QEL58_001735"
     CDS             complement(9055..9606)
                     /gene="sufT"
                     /locus_tag="QEL58_001735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003488784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative Fe-S cluster assembly protein SufT"
                     /protein_id="HDS1676213.1"
                     /translation="MYSRSSEPVHFERDCEAVMVPQGDTVTLPAGSYGYITQALGGSY
                     SVFVEGNLFRIAGKDGDAIGKEAPAPLELPADATDEQVEQLVWQQLRTCFDPEIPVNI
                     VELGLVYEVEIKHLDEGQREIDVKMTLTAPACGMGDILVDDVRSKLEMIPTVAEADVE
                     LVFDPPWNQHMMSEAARLETGML"
     gene            9729..10154
                     /locus_tag="QEL58_001736"
     CDS             9729..10154
                     /locus_tag="QEL58_001736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010481778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676214.1"
                     /translation="MSSNAARARTVTWLWPFMLLLGLVVAPLAWMVLALMTGRQVGWM
                     AVLTALELVFMLRMGTLGPGRLRIALVVLGTLLVAAVANWTIASAWMGGSIGLGLWDA
                     SLRMGPHLAWTLITLANGAMEWLWLAVAVAVIVGAWLAR"
     gene            complement(10247..11707)
                     /locus_tag="QEL58_001737"
     CDS             complement(10247..11707)
                     /locus_tag="QEL58_001737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)(+) transhydrogenase (Re/Si-specific)
                     subunit beta"
                     /protein_id="HDS1676215.1"
                     /translation="MNISTVELLDWLVKASYLVAATLFLLGLQRMASPLTARSGIRWA
                     GLGMLLATVATFFLPELHNVPLILVALLLGAGLAWWSAGKVAITDMPQMVALYNGMGG
                     GSAAAIGAVELLRYAFLAHRDTTHWSEQALADLAARQPSGTVLLLAVVGAAIGAVSLS
                     GSVIAWAKLDGRLDKRVTWPGQQVMNLVVALAVVVLAIIAASTLSTWAIVAFFVLALA
                     LGVLMTLPIGGADMPVVISLYNAFTGLAVSFEGYVLGNEALIIAGMMVGAAGILLTRL
                     MAKAMNRPIRNVLFSNFGGGAGGEAQAISGSQKPIEAADVAAMMAFAERVVIVPGYGM
                     AVAQAQHKIWELAQRLGQRGVKVKFAIHPVAGRMPGHMNVLLAEAGVPYDLIADMDDI
                     NPEFANTDVVLVIGANDVVNPVARTDPASPIYGMPVLDVVNARNVVVIKRGKGTGFAG
                     IENALFYADNTRMLYGDGAEAAASLVSELKALDGGH"
     gene            complement(11704..12024)
                     /locus_tag="QEL58_001738"
     CDS             complement(11704..12024)
                     /locus_tag="QEL58_001738"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014646018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P) transhydrogenase subunit alpha"
                     /protein_id="HDS1676216.1"
                     /translation="MSDGFVALYIFMLAAIAGHVIISRVPVILHTPLMSGSNFIHGIV
                     LIGAMVVLGHAQTPLEKALGFLAVVLGAGNAAGGYVVTARMLEMFKPSAPKGGKDQPK
                     EPQA"
     gene            12123..12707
                     /locus_tag="QEL58_001739"
     CDS             12123..12707
                     /locus_tag="QEL58_001739"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HDS1676217.1"
                     /translation="MVTPSEEPYPVLVSSPVPPSAETDAVPASLEAFLASVGPRAFRF
                     AEAGLRQREDAMDAVQDALMRMLDYADKPATEWAPLFWSILRRRVIDLQRRRRFRLPF
                     WRDNQDADGGDIDWADPGPDPAQAHEQRQQYQQLVQALRTLPARQREAFTLRVLQDLD
                     GATTARAMGCSEGAVKTHLARARQALQDYLETHP"
     gene            12704..13030
                     /locus_tag="QEL58_001740"
     CDS             12704..13030
                     /locus_tag="QEL58_001740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676218.1"
                     /translation="MNRSLPSDDTLRSLHAQALQALSPATLARLRLARHGATAAHRGR
                     WRWWLASACSLVVALGIGLQFSGHGPVTGPAPAPVLASVEDNSALYDENPDLYLWLGD
                     TDLAME"
     gene            13035..13496
                     /locus_tag="QEL58_001741"
     CDS             13035..13496
                     /locus_tag="QEL58_001741"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3106 domain-containing protein"
                     /protein_id="HDS1676219.1"
                     /translation="MPRLNILPLLLTLSLLPAVPALAQSAAHTPAARPLPATPLPAWE
                     QLSEAQRESLLAPLRDRWNGADAGQRQRMLSHGQRWQSMSPEERDKARRGLRRFEHMS
                     PEQREQARALFGQMRDMPPAQREALRERWSQMTPEQRKDWVRDNPPPAKPR"
     gene            complement(13560..14639)
                     /locus_tag="QEL58_001742"
     CDS             complement(13560..14639)
                     /locus_tag="QEL58_001742"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005412320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P) transhydrogenase subunit alpha"
                     /protein_id="HDS1676220.1"
                     /translation="MAVALLGIKETAPGERRVALTPETARKLGALGITVWYESGAGLA
                     AGFTDAAYDDAGARAFDAQRWGEIDILLCVQAPPAGVLERLKPGASVVGLLTPASDPA
                     LAALAADDRLHLFPLQQLPRTTRAQAMDVLSSQAGMAGYKAALIAAERAPRFFPMLTT
                     AAGTVRPAKVLVIGAGVAGLQAIATARRLGAQVEGFDVRPETREQIQSLGARFLDLGV
                     SAAGEGGYARALTDEERAEQQRRLADHLRGVDVVICTAAVPGRPAPTIVTAAMVDGMA
                     TGSVIVDLAAESGGNCALTQPGQCIEHQGVTIDGPLGLASRGATQASEMYARNLLNFV
                     ALFVREGQLGFDWEDELLAKTRWQS"
     gene            complement(14691..17012)
                     /locus_tag="QEL58_001743"
     CDS             complement(14691..17012)
                     /locus_tag="QEL58_001743"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1631 domain-containing protein"
                     /protein_id="HDS1676221.1"
                     /translation="MMSVPTPMGSPGRDPAQLQRARDMVLPALCQAFGAALARFDDAL
                     FDRAGNAGSSQLLFLDAMRELRRRREDIAAAFAGHLQRAWEALASGEPLSAETTLSGP
                     AEDGLSLLAEHVLESRLAVRNFATVLLRDFKPVLARLDRRLGRLIGGSELDADHNPIS
                     PEHLGVAIHEAFAGCELAPEVHLVLIKLCERDLRAPVGRIYEKLDEQLAAAGVMSQMG
                     TPRRPPSAAPDPRMASALDDLVEQRQGAGFDAEFGDDEQAAPAWAQRFAARWSERRGH
                     MQQHLPGEDSGTGEAYAGQQGMLLEALHELLQQTRHVREDATSAAQVAIGQQRPLSQR
                     EMMSVLSLLQATPSATLRAAIGEDGESLAQRLKSEVLSSATRLGVDPGQTRLDPQDED
                     AIDLVGMLFDVMLDERELEGRSRELIGRLVVPFVKVAMLDRRMFVQKTHPARKLLNSL
                     AEACEGNTGESQAERMLMAKVEEIIERLVAEFNENLAIFLTLEEEFREFLVQHRRRVE
                     IAERRAAETQRGQEKLEMARTRAGAELDRRIGDATLPPAIAEFLRQPWQHHLTLALLR
                     EGEEGASVAEALGLGDGLLEEVAEARRQIVGKPWLQAWQPALAKVFASVGVHGDAATG
                     AIDALHDTLQGIAESRPELQRALPELPQVALPAPPVAESPAVELGGQIDADDFDNADA
                     DRFRRMEIGNWLDFVDKDGKVQAGKLSWVSPISSRLLFVNRRGVRFCVASPEELAVMV
                     RLGRLRAHVDDGAFDSAMQGVIDRLDPGSATLH"
     gene            17344..17925
                     /locus_tag="QEL58_001744"
     CDS             17344..17925
                     /locus_tag="QEL58_001744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014646012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase"
                     /protein_id="HDS1676222.1"
                     /translation="MPDPAALLALDARRSVPSRQLGEPGPDPATLQRMLASAVRVPDH
                     GKRVPFRFLKIAGDARHTLGDFLVELSRQRDPHAGEAVFEKDRQRFSHAPLVIVVVAS
                     PRPDPKVPEQEQLMTAGCVCFALLQAAQALGFGAQWLTAWMAFDPVVQAHLGLAAGES
                     IAGFIHIGTPKAEVPERERPDPAALLRDWTPPA"
     gene            17922..18857
                     /locus_tag="QEL58_001745"
     CDS             17922..18857
                     /locus_tag="QEL58_001745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014036062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease IX"
                     /protein_id="HDS1676223.1"
                     /translation="MTLPAPAPSLYLVDASIYVFRAWHSLPDQFQDAQGWPTNAVHGF
                     ARFLLDLLERERPRHIAIAFDEALDSGFRHRLYAAYKANRDPAPEALKRQFVHCKALC
                     AALGLVVLAHHDYEADDLIGSALHQHRHSHRGVIISADKDLSQLLLDHDEQWDYARNQ
                     RWDVAGVKARHGVHAHQIADYLALCGDAVDNIPGVSGVGSKSAAVLLAHFGSMDALYE
                     RLDEVPFLRLRGAAQMAVRLREQREHALLWRQLTTIALDAPLEGSQPGLLRQAADPEL
                     LGGLCQTLRFGPMTRRRLFDAAGVADPLPIHSEPA"
     gene            18854..19408
                     /locus_tag="QEL58_001746"
     CDS             18854..19408
                     /locus_tag="QEL58_001746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014036061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HDS1676224.1"
                     /translation="MSQRTTEAPRVVYEGKYQRMLVRGTWEYSERTHAGGLAAIIIAV
                     TPEDKVLFVEQFRVPLQAPTIEMPAGLVGDIHAGESIEVSALRELEEETGWTADHAEV
                     LMIGPTSSGASSEKIAFVRATGLRRIGEGGGDDSEDITVHEIPRAQAAAWLVQKMGEG
                     YELDAKLWAGLWMIEHHLDGRARG"
     gene            19401..20198
                     /locus_tag="QEL58_001747"
     CDS             19401..20198
                     /locus_tag="QEL58_001747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014036060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-formylglutamate amidohydrolase"
                     /protein_id="HDS1676225.1"
                     /translation="MADADLHALPALLGADDPALYTIHQPQGASPFLLLADHAGQQVP
                     RALAGLGLPQAELDRHIGWDIGIAGTTRALAERLDAWAIEQTYSRLLIDCNRPLASPT
                     LIPEVSDHTRVPGNAGLSAAQRQQRIDAIHAPYHARIDAELDARRDAGRATLLVMMHS
                     FTPVMNGMQRPWQAGVLYHQDTRFAHALLQALRDEGDLVVGDNEPYSVSSTSDYAVPV
                     HGEGRGLVHVELEIRQDLIADAAGQQAWAERLARIFSALQPQLLALA"
BASE COUNT         3311 a         7019 c         6743 g         3131 t
ORIGIN      
        1 acttggaagc ggcgatctgc ttttcgatgt cggcggcggt caccgggcca aggaagctgt
       61 gcgccagctt gccctgcgga tccagcagat gcgtcagcgg cagcccacgc ggggtggcga
      121 aatcggccgg cggatcgaac ggatccacga tcacgatcgg gtaggtcacc ggatgcttgg
      181 tcaggaacgc ctgcatctcg ggcgcctcga tgtcctcata ggccagccca accacttcga
      241 tgttgctgcg catcgcatgc agcgccgaca gctccggcat ttccttgcgg cacggcgcgc
      301 accaggtcgc ccagaaattc accaccaccc acttgccacg atgcgcggcc aggtcgtact
      361 cgctgccatc caccgccttc atcttcagcg ccgggaactc ggcggtggtg cgttcggccg
      421 gggtctcctc gaccggtgcg ggcgtgctcg gtgccggtgc ctgcgccggc ggctggctgc
      481 tggccggggc cggttcctgc gccggcttgc aggcggcaag ggccagcgcc agggccagtg
      541 ggagcagcag caacggggtc ttgcgggtca tggcgtgtct ccagaatcag tatagatatc
      601 gctgaccttg cgcttgaggc gttcgcgcag gggcagtcgc aggtcgtcca gtgccgccag
      661 ggcggcgcgg cccaggctgt cgtcgcggta cggcaggtgc tgctcggcta ccgggatgcg
      721 cagctgggtg cattcgtaca ggtcggccag gctgacctgg tccaggtcgc gcgacagcag
      781 ccactcgcct tgctcgtcgc ggcgcagcag accgatctcc tgcaggttgc aggccaggtc
      841 atgcagcagg gagtccgtca gcatcggctc cagccgcagg atttcatcat cggccaggcc
      901 cctgcccttc aagcgcgcat ggtggaagcg accgagcagg cgcagcaggc cgtagaactc
      961 gtagccctgc ggcaggcgca gctccaccgg ctggtagcgg aaggcagcca tcgacgagga
     1021 caacgacgcg cccagcagca cggccaccca gcacaggtag atccacagca gcaggatcgg
     1081 cacgaaggcg accgtgccat acagcttctg gtaggactgg aagctgccca ggtaggcgcc
     1141 gatgccccac ttcaccagtt ccaggatcac cgccgccaga atggcgccgg ggaccgcgtg
     1201 ccgccacttc accgtgtggt gcggcaccac ccggaacatc aacgtgatgc acacgaactc
     1261 gatcaggatc ggcgccagcc gcagtgccag ttcggccagc cagcggccct cctgggtacc
     1321 gaacagcggc atcgcgaaca cccgcgccga taccgccagc gaagcggcgg cgagcatcgc
     1381 gcccagggtc agcacggtcc agtagaccag gaagcgggtc agcttgggcc gggtcgaacc
     1441 gacccgccag atctggttga aggtctcttc aacactgttg agggtgatca gcagggacac
     1501 caccagcgcg atgaaaccgg ccgcggtcag ctggccggca ctggccgaga actggcgcag
     1561 gtagccctcg gccgcacgcg cggcattggg tacgaagttg gagaagacgt aatcgctgag
     1621 ctggtcgctc cagcggtcga agacgggaaa ggccgagagc acgccgaaca ccacgatcgc
     1681 cagtggcacc agcgcgaaca ccgtggtgta cgccagcgcc gccgctgcct ggaacaggcg
     1741 gtcgtcgagg aagcgatgcc acaggaagcg gccgaaactg atggcccgtg cgcgatcccg
     1801 cgcgcgctcc atccacaggt tgagcgtatc caaaggttcc atcggcgaaa gggtacccga
     1861 tgcggaatgc tcgcaggata gccatactgg tggccagacg acgaggagaa gcgggcacga
     1921 tgggcgagat tctggtgctg tactacagcc ggggcggttc ggtggcacgg ctggcgcgcc
     1981 agatcgcgcg gggcatcggc gaggtgccgg ggatgaccgc gcgcctgcgc acggtaccgc
     2041 cggtggccgc ggtaacccag accgcgcagc cgccggtacc cgacgatggc gccccctacg
     2101 tgagcgtgca ggacctggtc gaatgccagg gcctgctgct cggcagcccg acccgattcg
     2161 gcaacatggc cgcgccggtg aagcacttcc tcgatggcct gggcgccgaa tgggtcaacg
     2221 gcacgctgtc gggcaagccg gccggcgtgt ttacctccac cgcttcgatg catggcggcc
     2281 aggagtcgac cctgctgtcg atgcaggtcc cgctgctgca ccacggctgc ctgatcgtcg
     2341 gcatcccgtt caccgagccg gcgctgagcc ataccaccag tggcggcacg ccgtatggtg
     2401 caagccatgt ggccggtgcc gccgacgacc cgcaaccgac cgacgacgag gccgtgctgg
     2461 cccgcgcgct gggccgccgg gtggccgaca tcgcgcagcg gttgggccga tgagcgccgc
     2521 gccgcgcacg gtcctgctgc tggccctgat ggggctggcc gcgctgttcg caggctggtt
     2581 catcaatgac aagcactggc tggccaccca gctggtgttc accgcgccgc cgctggcgct
     2641 ggccgtcgcc ctgcggctgg gctggcgcaa ggccggcttc tgggcctcgg tactggccct
     2701 gggctggttc agccacggcg tgatgagtgc ctggagccac ccggaaacac gctggctggc
     2761 gctgatcgag atcgcactgg ccctgctggt gatcttcagc gccagcctgc cggggctgcg
     2821 cgcccgcttc ggcaagcgac gctgacgctg cggccgccgg gccgtatcat ctgtgttcct
     2881 ggccccgcgc cgctgtacct gtcctggttt cgcgcatgca catgatggaa gagctcctgg
     2941 tcgtcaccac cggcggcacg atcgacaaga tctacttcga cgacaagtcg gactaccaga
     3001 tcggcgatcc gcagatcggc atgatcctgc gcgagctggg cgtgaccttc cgtttcaacg
     3061 tgattccgat cctgcgcaag gactcgctgc acatcaacga tgaggaccgc gagctgatcc
     3121 gcgccaccat cgccgcgcag ccgacccgcc acgtgctggt gacccacggt accgattcga
     3181 tggtgcagac cggcaaggtg ctggcgacga tcccggacaa gaccatcgtg atgaccggcg
     3241 cgctgagccc ggcccgtttc cgcggctcgg atgcggagtt caacatcggc tgcgcgatcg
     3301 gtgcggtgca gtcgctgccg accggcgtgt acatcgcgat gaacgggcgg atctttgatc
     3361 cgcagcacgt gcgcaagaac gtggcggcga accgcttcga gtcggtctga ggaacggcgt
     3421 gccgaccaag gtcggcaccc accaaagcgc tgcccttgta gtgccgagcc atgctcggca
     3481 accgcgcgcc agcgcggcac aggcatccca agccgaaggc cgtgccgacc aagttcggca
     3541 cccacccgga caagaacgcc ccggccggag ccggggcgtg cccatggaga gggacttggg
     3601 ctcagtactg ggcgttgagg gtcaggcccg agaaggtgct gtacgccttg acccgcacat
     3661 accaggtgcc ggcagcgggg ctgttgatgg tgcaggtttc gctgttgcca ctcaggtacg
     3721 ggcggcaggt gtaggtggta tcggtcgggg cactgccctg gcgcacgtag aggtcagcat
     3781 caccgctgcc gccactgatc gccacgcgca gctgggtact gccggccgga accgcgacgg
     3841 tgtagttcag ctcggcaccg gtcgcagcac ccaggccggt caccggcaca ttgttctgca
     3901 gcacgttgcc acccgggttc ggcccaccac cgttgatggc cgcagcaacg gcggcatcgg
     3961 cgttgacgat gcccgcgcca caaccacccg agcaggcacc gggcagcgga cgtgcggtgc
     4021 tcttgatgat gctctcgacc tgtgccggac tcagcgggct gggcgccacc gactgcatca
     4081 gtgcaaccac acccgccacg tgcggcgccg ccatcgaggt gccgttgtag gaggcgtagg
     4141 tggcgctgcc cggcgtggtg gtgccggtgt tgagggtgga caggatgctc tggcccgggc
     4201 cggagatgtc gatgccggca ccatagttgg agaagctggc acgtgcaccg gccgaggtgg
     4261 tcgcggccac cgcgatcacg ttcgcacagt tggccggcac cgacgaggac acgttggtgt
     4321 tgctgttgcc agcggcgacc accaccgtgg tgccacggcc gaccgcaccg ttgatcgcgt
     4381 tctggtaggt ggacgagcag ctgccgccgc cgcccagcga gaggttgatg acctcggccg
     4441 gattggcatt ggccggcacg ccgctgacgg tgccaccgga ggcccagacg atcgcatcgg
     4501 cgatatccga ggtgtagcca ccgcacttgc cgagcacgcg gaccggcacg accttggcgt
     4561 tgaacgcggt gccggccacg ccggtgctgt tgttggtcac cgccgccacc gtgccggcga
     4621 cgtgggtgcc gtgccagctg gagttggagg ctggaatgcc cgggccgcac tcgttggcac
     4681 cgtaccagtc gccttcgtcg ttcggattgc tgtcgcggcc accgccatca cgcgccatcg
     4741 ccgcatcgct gatgaaatcg tagcccggca ggatgttggc attgaggtcc ggatggttgg
     4801 tgatgccggt gtcgatgacc gccaccacca cgccggtgcc ggtcgacttg tcccaggccg
     4861 ggcgcacgtt gatcgacgca ttggaggtgc caaagcccca ctgctcgctg aaacgggtgt
     4921 cattgggcgt cagcgtggca cgcatgatct ggtcgacttc gacgtattcc acgttcggat
     4981 cggcggccag cttgcgcatc agcagctcgg attcggcctg gtcgagcgga cgatcggtcc
     5041 tgaccagggt cgggccgacg gccagcttgc ggacttcctg caggcccagc gcgcggccct
     5101 ggctgctggc caggccggcg gcggccgtct tcagcgagga agccagtgcg gtggtattgg
     5161 ccaccggcgc actgccgtca cggtacttca cgatgaagcg ctggtgcgtc ggcgcggact
     5221 gcagcccgct gagctggaca tcaccggcca gcgcaggcgt ggccagcagc agcgatgaca
     5281 gaacggacgc accaaggacc acccacactc gacgcacacg cggttgcgtt acctgggaca
     5341 tcgtatttcc ctttctagtg gtgtgaatgc cggaatcggc agaagcaccg gcccgaacca
     5401 tgggctggct tgcgttggcg aggttcgaag tccggcgagt cagcggatcc cccttttgat
     5461 ccgccgtgca gatgacgcta atgaccaaaa ccggacacca caagattttc agcgtctttt
     5521 cagcaagatg aaatgtctga tctgagactt tccgggtcga gggtttgtga aggtgaagga
     5581 actttcgcgc gccctgcaca gccctgactg ggggatgtca tgtccacgca tgactttgcc
     5641 gacatcggcg tccgctcacc aacgacgacg gccgcccggc atcggaacgg ccatcacgca
     5701 tgtgcttcag gaacagcgct actgtgcctg cgcaacaccg gcgggacgga tctgctgccc
     5761 cttgaccggc tcaccgcgcg cgacgggctg gccatcggcc aggtaatcgg agaactgcgc
     5821 cggcagcgcc acgccaacac cgaatgcagg ccctgcctgc agctggtagt gcaggtgcgg
     5881 ctcggaggaa ttgccgctgt tgccacagtc agccagatgc gcaccgctgc ggaccacctg
     5941 cccctgtgcg acgcgcacgc tgccctgccg caggtgcgcc agcaccgagt actcgtcatt
     6001 gccgtggtcg aggatgaccc ggttgccggt gagctgcgcc gcattcatct ggccgggcac
     6061 gttgtcggca acactgtcga ccacctctac cacggtgcca tcggcaggcg cgaggatcgg
     6121 gcgaccgaag cagaagtagt cttcattgcg cagcccgtcg ccccggtgcg atcggccctc
     6181 gcggaccatc agcaggtcca gcgcgaagcg ctggccagcg tgggccgcat ggtagttctg
     6241 ctcgatgctg cgcccacccc agaacacgaa gaactcgtcg gcgaacggca gttgcaggcg
     6301 cgtgcgggtg gtgtagtcaa ggaaccggct ggccgcggcc tgtgggggcg aggcctgttc
     6361 ggggcggatg tagaagccgc tgatccgccc ctcggcgtcg agtgcccaca gcacctggac
     6421 gatgcccggg cgcttctcga aacgaacctg gcgcagatag gtgtcgtttc catctgcact
     6481 gccgaccttc tcgctgacca cttccgtttc cgccccccag ccggagatca cctgctcgcg
     6541 cagtgccacc aggttctgcc tggactgcag cgccgcctgc atctgcggcg tcatccgctc
     6601 ccacagggcg tcgatgtgtc cctcgtagaa ctgcgtggtc aacgccgccc cctgctggcg
     6661 cggatcgctc gtcgcggccc tgccaccgag ggctggaagg gcgagaacca gaactgcaat
     6721 caggcgtgga agcaatgtca tgtcagggct ccttgcgatc tggaacggga ataccggcga
     6781 cgatcgccgc cagctgcgtg cggtattcgg tgagggcctg tcgcccaacc ggagtcagct
     6841 gcagggtggt caggggacgc ttgccccgga acgtcttgtc gatggcaacc agcccggccg
     6901 cctccaactt gctcagatgg ctggacaggt tgcctttgct caggccactg agatgctcga
     6961 cgaaaccgaa ctcggccgat tcggcgccgg ccaggatcga caggatcagc aggcgtgccg
     7021 gttcgtggat caggcgatca agctgcagca gcgtgcgggc atcaggcaat ctgctcattc
     7081 ggggtgtgcc cgccccgcca tgaacatgcg catctcggcc tgcaggcgga ggaagcgctg
     7141 gtgatcacgc cagccgacga cgatcagcgc gatggacgcc agcgggaaca cggcggtgct
     7201 cggctcgaac ccataggtct gcccggtgaa ggccagcgcg gcctggcaca tcaggaacac
     7261 gcccacgatg aactccaggg gagtacgcag ccaacgccac accacccagg ggagcatcgc
     7321 cactaccccg aggtaaccga gtgcgcgcag gtcccagggc cgctcgccca tcggggccag
     7381 gtgggtcagc acgctgccga ccaccagcac gctcaccagc gcggtgaagg cgatgaagaa
     7441 tcgctggaaa ttgcgctcga ccggcgtgac ctgctcctcg acctggccca gccgctggta
     7501 atagcggtgc gcaagccact gcttgccgac gatccacagc acgggcatgg cgatcagcac
     7561 gatgcgcagc gccagggtgg tcggcaacag ggcgccggcc aggaaagagg ccaggcaggc
     7621 aacgccaccg gccatcgccg acaggccgcc ggcgcttcgc gagtaccgcg agtattcacg
     7681 ggtcagcgcc tgcaggcgcg aggaagggtc gatgacggac ggctgctgca tgacatgctc
     7741 cagcgggggc gcttgaatta agtttgcatt gcaaacctat ttgcgtcaac cactcccggc
     7801 agcgatccgg cggccccata acgcagaaag cccgtcacgg ggacgggctt tccgggaacg
     7861 cggtcgagcc tggctcgacg ctatcgtttg gtgcgggcga tcaacccagc ttgaccagcc
     7921 agttgtggcg gtccggcaga cggccgtact ggatatcggt cagctccttg cgcagcgaca
     7981 tggtcacttc gccggccggg gcgttgatgt cgccgaccga gaagccctcg cccttcagct
     8041 ggccgatcgg ggtaaccacc gccgccgtgc cgcaggcgaa cacttcgctg atcgcaccgg
     8101 acgccacgcc gtccttccac tcatcgatgc tgaccttgcg ctcttcgacc ttcatgccgc
     8161 ggtcgcgcgc cagctgcagg atgctctcgc gggtgatgcc ctcgaggatg ctgccggaca
     8221 gttccggggt gaccagcgtg ccgtccttgt agaccaggaa cacgttcatg ccgcccagtt
     8281 cttccaggta cttgccctcg accgggtcga ggaacagcac ctgcgagcag ccctgggcct
     8341 gtgccttctg ctgcggcagc agcgaggcgg cgtagttgcc accgcacttg gcggcaccgg
     8401 tgccaccctt ggccgcacgg gcatactcgg tcgacagcca gatcgacacc ggggccacgc
     8461 ccttggcgaa gtacgggccg gccgggctgg cgatgacgta gtagccggcc ttgtgcgcgc
     8521 cgcgcacgcc gaggaaggct tcgtcgccga tcatgaacgg acggaagtac aggctggact
     8581 cgtcggccga cggcacccag gcgctgtcca ccgcgatcag ctgcttcagc gattcagcga
     8641 agatctccac cggcagttcc ggcagcgcca ggcgctgcgc cgaacgctgc aggcgacggc
     8701 cgttggcatc cgggcggaag gtccagatcg aaccgtcggc gtggcggtag gccttgatgc
     8761 cttcgaagat ttcctggccg tagtgcagca cggccgcagc cggatccagc tgcagcgggc
     8821 cgtaggcgcg cacgttggcg ttgtgccagc cggcatcctt gtcccagcgc acttccacca
     8881 tgtgatcggt gaagtgcagg ccgaagcccg gcttctccag gatctgggcg cgctcttcag
     8941 cgctgcgcgg gtggtccgaa cgggtgacgg cgaagctggg aatggactgg gacaccggag
     9001 atttcctgtt ctggttgcgg gtagtgccgg gcccgcgtcg ctgcgggccg tgggtcaaag
     9061 catgccggtc tcgagccgcg ccgcttcgga catcatgtgc tggttccacg gcgggtcgaa
     9121 taccagctcg acgtcggcct cggccaccgt cgggatcatt tcaagcttgc tgcgcacatc
     9181 atcgaccagg atgtcaccca tgccgcaggc cggtgcggtc agggtcatct tcacgtcgat
     9241 ctcgcgctgg ccttcgtcca gatgcttgat ctcgacctcg tagaccaggc ccagttcgac
     9301 gatgttcacc ggaatttccg ggtcgaagca ggtgcgaagc tgctgccaca ccagctgttc
     9361 cacctgttca tcggtggcat cggcgggcag ctccagcggt gccggggcct ccttgccgat
     9421 ggcgtcgccg tccttgccgg cgatgcggaa caggttgccc tcgacgaaca ccgagtaact
     9481 gccgcccaac gcctgggtga tgtacccata gctgccggcg ggcagggtca cggtatcgcc
     9541 ctgcgggacc atcacggcct cgcaatcgcg ttcgaagtgg acaggttcgc tgctacggga
     9601 atacatgggg accgatatgg ggccgcggcc gaggccacgc aagacggcat tctagcccag
     9661 ccgccctgcc accgccggtg cactgcggca aaccacagta tcctgtgggc gaccttctgg
     9721 gagcttcgat gtcctccaat gccgcgcgtg ccaggaccgt gacctggctc tggcccttca
     9781 tgctgttgct gggcctggtt gttgctcccc ttgcctggat ggtgctggcg ctgatgaccg
     9841 gtcggcaggt cggctggatg gcggtactga ccgcactgga actggtattc atgctgcgca
     9901 tgggcacgct tgggccgggc cgcctgcgca tcgcgctggt cgtgctgggc acgctgctgg
     9961 tcgccgccgt ggccaactgg accatcgcca gtgcctggat gggcggttcg atcgggctgg
    10021 gtttgtggga cgccagcctg cgcatgggcc cgcacctggc ctggaccctg atcaccctcg
    10081 ccaatggcgc gatggaatgg ctgtggctgg ccgtggccgt ggccgtgatc gtcggcgcct
    10141 ggctggcgcg ctgaccccac cggcaggtag tgccggccac tggccggcag aaacgtgcgg
    10201 accaaggtcc gcacctaccg gcccctggcg gatccgaccc cggccttcaa tgcccgccgt
    10261 cgagcgcctt cagttcactt accagtgagg ccgccgcttc agcaccatcg ccgtacagca
    10321 tgcgggtgtt gtcggcgtag aacagcgcat tctcgatgcc ggcaaagccg gtgcccttgc
    10381 cgcgcttgat caccaccacg ttgcgcgcgt tgaccacgtc cagcaccggc atgccgtaga
    10441 tcgggctggc cgggtcggta cgcgcgaccg gattgaccac gtcgttggca ccgatcacca
    10501 gcaccacgtc ggtgttggcg aattcgggat tgatgtcgtc catgtcagcg atcaggtcgt
    10561 agggcacgcc cgcttcggcc agcagcacgt tcatgtgccc gggcatgcgc ccggccaccg
    10621 ggtggatggc gaacttcacc ttcaccccgc gctggcccag ccgctgcgcc agttcccaga
    10681 tcttgtgctg ggcctgcgcg accgccatgc cataaccggg cacgatcacc acgcgctcgg
    10741 cgaaggccat catcgccgcc acgtcggccg cttcaatcgg cttctgcgaa ccggagatcg
    10801 cctgtgcttc accgccggca ccaccgccga agttggagaa cagcacattg cggatcggcc
    10861 ggttcattgc cttggccatc agccgggtca gcaggatgcc cgccgcaccg accatcatgc
    10921 cggcgatgat cagcgcctcg ttgcccagca catagccttc gaacgacacc gccaggccag
    10981 tgaacgcgtt gtacagagag atcaccaccg gcatgtcagc gccaccgatc ggcagcgtca
    11041 tcaacacgcc cagcgccagc gccagcacga agaaggcgac gatcgcccag gtgctgagcg
    11101 tgctggcggc gatgatcgcc aggaccacca ccgccagcgc caccaccagg ttcatcacct
    11161 gctggcccgg ccaggtcacc cgcttgtcga ggcggccatc cagcttggcc caggcgatca
    11221 ccgagccgga cagcgacacc gcgccgatcg ccgcgccgac caccgccagc agcaacaccg
    11281 tgcccgacgg ctggcgcgcg gccaggtcgg ccagtgcctg ctcgctccag tgcgtggtat
    11341 cacggtgggc caggaaggca tagcgcagca gctccactgc gccgatcgcc gccgccgaac
    11401 cgccacccat gccgttgtag agcgccacca tctgcggcat gtcggtgatg gcaaccttgc
    11461 cggccgacca ccaggccagc cccgcgccga gcagcagcgc caccaggatc aacggcacgt
    11521 tgtgcagttc gggcaggaag aaggtcgcca ccgtggccag cagcatgccc agcccggccc
    11581 agcggatgcc gctgcgtgcg gtcagcggcg aggccatgcg ctgcaggccc agcaggaaca
    11641 gcgtagcggc gacgaggtag ctggccttga ccagccagtc gagcagttcg acggtgctga
    11701 tgttcaagcc tgcggctcct tcggctgatc cttgccgccc ttgggcgcgc tcggcttgaa
    11761 catttccagc atgcgcgcgg tgaccacgta gccgccggcg gcgttgccgg caccgagcac
    11821 cacggcgagg aagcccagcg ctttttccag cggcgtctgc gcatgcccca gcaccaccat
    11881 cgcaccgatc agcacgatgc cgtggatgaa gttggaaccc gacatcagcg gggtgtgcag
    11941 gatcaccggc acccgcgaaa tgatcacgtg gccggcaatg gcggccagca tgaagatgta
    12001 cagcgctacg aacccgtcac tcactggcaa cgctcccgct ctgtcttcgt cggcccatca
    12061 taaccacggg ctgaacccgg cgcgtacccc gcgtcaacca aagccacgct cacgcgttgt
    12121 cgatggtgac cccgagcgag gaaccgtacc ctgtgctggt gagcagcccc gtccccccga
    12181 gcgccgagac cgatgccgtg ccggcgtcgc tggaagcgtt cctggccagc gtcggcccgc
    12241 gtgcgttccg cttcgccgag gccggcctgc gccagcgcga agacgccatg gacgcggtgc
    12301 aggacgcgct gatgcgcatg ctggactatg ccgacaagcc ggccaccgaa tgggcgccgc
    12361 tgttctggag catcctgcgc cggcgcgtga tcgacctgca gcgccggcgc cgcttccgcc
    12421 tgccgttctg gcgcgacaac caggacgccg acgggggcga catcgactgg gccgaccccg
    12481 gcccggaccc ggcgcaggcg catgagcagc gccagcagta ccagcagctg gtgcaggcac
    12541 tgcgcacgct gcctgcgcgc cagcgcgagg ccttcaccct gcgcgtgctg caggacctgg
    12601 acggggccac caccgcccgc gccatgggct gcagcgaagg cgcggtaaaa acccatctgg
    12661 cacgcgcccg gcaggcgctg caggactacc tggagaccca cccgtgaacc gctccctgcc
    12721 ctccgatgac accctgcgca gcctgcacgc gcaggcgctg caggcgctgt cgccggccac
    12781 gctggcccgg ttgcgcctgg cccgccacgg cgccacggcg gcccatcgcg ggcgctggcg
    12841 ctggtggctg gccagtgcct gttcgctggt ggtggcactg ggtatcggcc tgcagttcag
    12901 cggccacggc cccgtgacgg gccccgcgcc ggctccggtg ctggcctcgg tggaagacaa
    12961 cagcgcgctg tacgacgaaa atcccgatct gtacctgtgg ctgggcgaca ccgacctggc
    13021 gatggagtga aaccatgccc cgattgaaca tcctgccgct gttgctgacc ctgtcgctgc
    13081 tgccggccgt cccggcgctg gcgcagagcg ccgcgcacac gcctgccgcg cgccccctgc
    13141 cggccacgcc cctgccagcg tgggaacagc tgagtgaagc ccagcgcgaa tccctgctgg
    13201 caccgctgcg cgaccgctgg aacggcgccg atgccggcca gcgccagcgc atgctctctc
    13261 acggccagcg ctggcagtcg atgagcccgg aggagcgcga caaggcccgt cgcggcctgc
    13321 gccgcttcga gcacatgagc ccggaacagc gcgagcaggc gcgtgccctg ttcgggcaga
    13381 tgcgcgacat gccacctgcg cagcgcgaag ccctgcgtga gcgctggtcg cagatgacgc
    13441 cggagcagcg caaggactgg gtgcgcgaca atccgccgcc ggcgaagccg cggtaaacct
    13501 tcgggatagc gggggccaga tccctttgcc agcggcaaag ggatctgacc ccacgtcatt
    13561 cacgactgcc agcgcgtctt cgccagcagt tcgtcttccc aatcgaagcc gagctggccc
    13621 tcgcgcacga acagcgcgac gaagttgagc aggttgcgcg catacatttc gctggcctgg
    13681 gtcgcaccac gactggccaa gcccagcggg ccatcgatgg tcaccccttg atgctcgatg
    13741 cactggcccg gctgggtcag cgcgcagttg ccgccgctct ccgccgccag gtccacgatc
    13801 acgctgccgg tggccatgcc gtccaccatc gcggcggtca cgatcgtcgg tgccgggcgc
    13861 cccggcactg ccgccgtgca gatcaccacg tcgacgccgc gcagatggtc ggccaggcgg
    13921 cgctgctgtt cggcgcgctc ctcatcggtg agcgcgcgcg catagccgcc ctcacccgcc
    13981 gcgctcacgc ccaggtcgag gaagcgcgca cccagcgact ggatctgctc gcgggtttcc
    14041 gggcgcacgt cgaagccctc cacctgcgcg ccgagccggc gcgcggtggc aatcgcctgc
    14101 aacccggcca cgccggcacc gatcaccagc accttggccg gccgcacggt accggcggcg
    14161 gtggtcagca tcgggaagaa gcgcggcgcg cgttcggcgg cgatcagcgc ggccttgtag
    14221 ccggccatgc cggcctgcga actgagcacg tccatcgcct gcgcgcgggt ggtgcgcggc
    14281 agctgctgca gcgggaacag gtgcagacga tcgtcggcag cgagtgcagc cagggccgga
    14341 tcgctggccg gggtcagcaa cccgaccacg ctggcacccg gcttgagcct ttccagcacc
    14401 cccgcaggcg gtgcctgcac gcacagcagg atgtcgatct cgccccagcg ctgcgcatcg
    14461 aacgcacggg caccggcatc gtcataagcg gcatcggtga aacccgccgc gaggccggca
    14521 ccgctttcgt accagacggt gatgcccagg gcaccgagct tgcgcgcggt ctccggcgtc
    14581 agcgccacac gccgttcgcc cggcgcggtc tccttgatcc ccagcaacgc cacggccatg
    14641 caggtccccg ctgatcggtg agttttcccg atcctagcag gcggccccgc tcaatgcagg
    14701 gtggcgctgc ccgggtccaa tcgatcgatc acaccctgca tcgcgctgtc gaaggcgcca
    14761 tcatcaacgt gggcacgcag gcggcccagc cgcaccatca ccgccagctc ttccggcgag
    14821 gccacgcaga agcgcacacc gcggcggttc acgaacagca ggcgcgaaga gatcgggctg
    14881 acccaggaca acttgccggc ctgaaccttg ccgtccttgt cgacgaagtc cagccagttg
    14941 ccgatttcca tgcgacggaa gcgatcggca tcggcattgt cgaagtcatc ggcatcgatc
    15001 tgccccccca gttccactgc cggcgactcg gccaccggcg gtgccggcag tgcgacctgc
    15061 ggcagctccg gcagcgcgcg ctgcagctcc ggccgggact cggcaatgcc ctgcagggtg
    15121 tcatgcaggg cgtcgatggc gccggtcgct gcgtcgccat gtacgccgac actggcgaac
    15181 accttggcca gcgcaggctg ccaggcctgc agccacggct tgccgacgat ctggcggcgg
    15241 gcctcggcca cttcctccag caggccgtcg cccaggccca gggcctcggc caccgacgcg
    15301 ccctcctcgc cctcgcgcag cagcgccagg gtcaggtggt gctgccacgg ctggcgcagg
    15361 aactcggcga tggccggcgg caaagtggcg tcaccgatac ggcgatccag ctcggcgccg
    15421 gcacgggtac gggccatttc cagcttttcc tggccgcgct gggtctcggc agcacggcgc
    15481 tcggcgattt ccacgcggcg gcgatgctgc accaggaact cgcggaattc ttcttccagg
    15541 gtcaggaaga tcgccaggtt ctcgttgaac tcggccacca ggcgctcaat gatttcctcg
    15601 accttggcca tcagcatgcg ctcggcctgg ctctcgccgg tgttgccttc gcaggcctcg
    15661 gccagcgaat tgagcagctt gcgggccggg tgggtcttct gcacgaacat gcggcggtcg
    15721 agcatcgcga ccttgacgaa cggcaccacc aggcggccga tcagctcgcg cgagcggcct
    15781 tccagttcgc gctcgtccag catcacgtcg aacagcatgc cgaccaggtc gatcgcatct
    15841 tcgtcctgcg ggtccagccg ggtctggccg gggtcgacgc cgaggcgggt ggcgctggac
    15901 agcacttcac tcttcaaccg ctgcgccagc gattcaccat cctcgccgat cgctgcacgc
    15961 agcgtcgcac tgggggtggc ctgcaggagc gacaacaccg acatcatctc gcgctggctg
    16021 agcgggcgct gctggccgat cgccacctgc gcggccgacg ttgcatcctc gcgcacatgg
    16081 cgggtctgct gcagcagttc gtgcagcgct tccagcagca tgccctgctg gccggcgtag
    16141 gcctcgccag taccgctgtc ttcgcccggc aggtgctgct gcatgtggcc acgccgctcg
    16201 gaccagcgcg cggcaaagcg ctgcgcccag gccggagcag cctgttcgtc atcgccgaac
    16261 tcagcgtcga agcccgcgcc ctggcgctgt tccaccaggt cgtccagggc cgaggccatg
    16321 cgcgggtcgg gcgcagccga tggcgggcgc cgtggcgtcc ccatctgcga catcacgccg
    16381 gccgcagcca gttgttcgtc aagcttctcg tagatgcggc cgaccggtgc gcgcaggtcg
    16441 cgctcgcaca gcttgatcag caccaggtgc acttccgggg ccagttcaca gccggcaaag
    16501 gcttcgtgga tggcgacacc cagatgctcg ggactgatcg ggttgtgatc ggcatccagt
    16561 tcactgccac cgatcagccg gcccaggcgg cggtcgagcc gcgccagcac cggtttgaag
    16621 tcacgcagca gcacggtggc gaagttgcgc actgccagcc gcgattccag cacatgttcc
    16681 gccaacaggc tcaggccgtc ctcggccggg ccggacaggg tcgtttcggc cgacagcggt
    16741 tcaccgctgg ccagcgcctc ccaggcccgc tgcagatggc cggcaaaggc ggccgcgata
    16801 tcctcgcggc ggcggcgcag ttcacgcatc gcatccagga acagcagctg cgacgaaccg
    16861 gcattgccgg cccggtcgaa cagggcatcg tcgaaccgcg ccagtgcggc cccgaaggcc
    16921 tggcacagcg ccggcaggac catgtcccgg gcacgctgga gctgggccgg gtcacgcccc
    16981 ggcgatccca tcggtgtggg cacgctcatc attcgggaag gctccccacc ttctctggta
    17041 cgacagacag catggacatc gcgacggccg gcacacccca tgcaccggta cgtcgatggt
    17101 aggccggcca gcccgtcacg gacagtgaaa cagtcctcac ttcaaacctc atgaccggcg
    17161 gcccggcaag atagatatcg taagccgtgc aaggcctgcg aggcgagggg aagcggccgt
    17221 ccgtttcccg ccagtggcat gacgttcatc acagtttgat attcaaaggc cggacgcgac
    17281 acaaacggcg tcgttgacca ccccgactat aatcaaacac ccgtgatgac cggttcagac
    17341 tccatgcccg accccgccgc cctgcttgcc ctggatgccc gccgctcagt gccctcgcgg
    17401 cagctcggcg agcccggacc ggacccggcc accctgcagc ggatgctggc ttcggcggtg
    17461 cgcgtgcccg accacggcaa gcgcgtgccg ttccgcttcc tgaagatcgc cggcgatgca
    17521 cgtcacactc tgggcgactt cctggtcgaa ctcagccgcc agcgcgaccc gcatgccggc
    17581 gaggcggtat tcgagaagga ccgccagcgc ttcagccacg cgccgctggt gatcgtggtg
    17641 gtggccagcc cgcgcccgga cccgaaggtg cccgagcagg agcagctgat gaccgccggc
    17701 tgcgtctgct tcgccctgct gcaggcggca caggcgctgg gcttcggcgc ccagtggctg
    17761 accgcttgga tggcattcga ccccgtcgtg caggcccacc tgggcctggc cgcgggcgaa
    17821 agcatcgcag gtttcatcca catcggtacg ccgaaggccg aggttcccga gcgcgagcgc
    17881 cccgaccctg cggcgctgct gcgcgactgg acgccgccgg catgaccctg ccggcaccgg
    17941 cgccctcgct gtacctggtt gatgccagca tctatgtgtt ccgcgcctgg cattcgttgc
    18001 cggaccagtt ccaggatgca cagggctggc cgaccaacgc cgtgcacggc ttcgcccgct
    18061 tcctgctgga cctgcttgag cgcgagcgcc cgcggcacat cgccatcgcc ttcgacgaag
    18121 cgctcgacag cggcttccgc caccgcctgt acgcggccta caaggccaac cgcgacccgg
    18181 cgccggaagc actcaagcgc cagttcgtgc actgcaaggc actgtgcgcc gcgctgggcc
    18241 tggtggtgct ggcccatcat gactacgagg ccgatgacct gatcggcagt gccctgcacc
    18301 agcaccggca cagccatcgt ggcgtgatca tttccgccga caaggacctg tcgcagctgc
    18361 tgctcgatca cgacgagcag tgggactacg cgcgcaacca gcgctgggac gtggccggcg
    18421 tcaaggcgcg gcatggcgtg catgcgcacc agatcgccga ttacctggcg ctgtgcggcg
    18481 atgcggtgga caacattccc ggcgtcagtg gtgtcggcag caagtccgcc gccgtgctgc
    18541 tggcccactt cggcagcatg gatgcgctgt acgaacgcct ggacgaagtg ccgttcctgc
    18601 gcctgcgcgg cgccgcgcag atggcggtgc gcctgcgcga gcagcgcgag cacgccctgc
    18661 tgtggcgcca gctgaccacc atcgcgctgg atgcgccgct ggaaggcagc cagcccggac
    18721 tgctgcgcca ggcggccgac ccggagctgc tcggtggcct gtgccagacc ctgcgcttcg
    18781 gcccgatgac ccgccgccgg ctgttcgatg ccgccggcgt ggccgaccct cttcccatcc
    18841 acagcgagcc cgcatgagcc agcgcactac cgaagccccg cgtgtcgtct atgaaggcaa
    18901 gtaccagcgc atgctggtgc gcggcacctg ggaatacagc gaacgtaccc atgccggtgg
    18961 cctggcggcg atcatcatcg ccgtcacccc cgaggacaag gtgctgttcg tcgaacagtt
    19021 ccgcgtgcca ctgcaggcac ccaccatcga gatgccagcc ggcctggtcg gcgacatcca
    19081 tgccggcgag tcgatcgaag tctcggccct gcgtgagctg gaagaagaaa ccggctggac
    19141 cgccgatcac gccgaagtgc tgatgatcgg cccgacctcc tccggtgcca gcagcgagaa
    19201 gatcgccttc gtgcgcgcca ccggcctgcg ccggatcggc gaaggcggcg gcgatgacag
    19261 cgaggacatc accgtgcacg agattccgcg cgcgcaggcc gcggcgtggc tggtgcagaa
    19321 gatgggcgaa ggctacgagc tggatgccaa gctgtgggcc ggcctgtgga tgatcgagca
    19381 ccacctggac gggcgcgcgc gtggctgacg ccgatctgca cgcgctgccg gcgttgctgg
    19441 gcgccgatga cccggcgctc tacacgatcc accagccgca gggcgcctcg ccgttcctgc
    19501 tgctggccga ccacgctggc cagcaggtgc cgcgcgccct cgccggcctg ggcttgccgc
    19561 aggccgaact ggaccgccac atcggctggg acatcggcat tgccggcacc acccgcgcat
    19621 tggccgaacg gctcgatgcc tgggcgatcg aacagaccta ttcgcggctg ctgatcgact
    19681 gcaaccgtcc gctggcctcg cccacgctga ttccggaagt gagcgaccac acccgggtgc
    19741 cgggcaacgc cgggctgtcg gcggcgcagc ggcagcagcg catcgatgcg atccacgcgc
    19801 cctaccacgc acgcatcgac gccgaactgg acgcacgccg cgatgccggc cgcgccaccc
    19861 tgctggtgat gatgcacagc ttcaccccgg tgatgaacgg catgcagcgg ccgtggcagg
    19921 ccggcgtgct gtaccaccag gacacgcgat ttgcgcatgc actgctgcag gcgctgcgcg
    19981 acgaaggcga cctggtggtg ggcgacaacg agccgtactc ggtgagcagc accagcgact
    20041 acgcagtgcc ggtgcatggc gaaggccgcg gcctggtgca cgtggaactg gaaatccgcc
    20101 aggacctgat tgccgatgcc gccggacagc aggcatgggc ggagcggctg gcgcggatct
    20161 tcagcgcgtt gcagccgcag ttgctggccc tggcatgacc ctat
//
LOCUS       DAOKIP010000056        20130 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.056,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000056 DAOKIP010000000
VERSION     DAOKIP010000056.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 20130)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20130)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20130
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.056"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..306)
                     /locus_tag="QEL58_001748"
     CDS             complement(<1..306)
                     /locus_tag="QEL58_001748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019336670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676226.1"
                     /translation="MRLSPLALLAILPLAACSHAGSSTTHDAAPTPVADAAHECRPEA
                     LEAFTGKTADEATLKKLVADSGARNARVVKPGMAVTMDFRQDRVTVQVDGQNRIERAS
                     "
     gene            complement(382..1404)
                     /locus_tag="QEL58_001749"
     CDS             complement(382..1404)
                     /locus_tag="QEL58_001749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease H-like domain-containing protein"
                     /protein_id="HDS1676227.1"
                     /translation="MSLSLDKLRLLRKQAGDPKASTPAVPGPPPTVPAPVAANDARQP
                     PAERSVFAWVEQEIRHKPTGAAAPVAHPAPLRRPEVGSLHRLLGLRTRGSSAPVRASA
                     QDRQLPGEEIAPGLFLIESLQAQPIPAQPLSLDFARREGEHVSPRDLLFFDTETTGLA
                     GGTGTRAFMIGAADWHACPQRGEGLRIRQLLMATMAAEDAMLATFASWLQPSTVLCSY
                     NGRSYDAPLLKARYRLARQRCPISALDHVDLLYPTRRRYRGTWENCKLSTIERQLLRV
                     VREDDLPGSEAPGAWLRFLRGGDAVNLRRVADHNHQDVVTLALLLQRLVHEEQRERET
                     LALVGQ"
     gene            complement(1401..3890)
                     /locus_tag="QEL58_001750"
     CDS             complement(1401..3890)
                     /locus_tag="QEL58_001750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019337487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HDS1676228.1"
                     /translation="MAYELAKRTADAEQKLATRDGLPARDGALLSARLQRRYQDRITG
                     SFAIPGREGRYAPIPDAVPPALAAALKARGIEQLYSHQAEAWEASQRGEHVAIVTPTA
                     SGKSLCYTLPVVSAAMQDKAKALYLFPTKALAQDQVAELLELNRAGDLGVKAFTFDGD
                     TPGDARQAIRLHGDIVVSNPDMLHQAILPHHTKWAQFFENLRYIVIDEVHTYRGVFGS
                     HVTNVLRRLKRICAFYGVQPQFILCSATIGNPQAHAEALIEAPVTAITESGAPSGPKQ
                     VLLWNPPVINPDLGLRASARSQSNRIARIAIKSGLKTLVFAQTRLMVEVLTKYLKDIF
                     DHDPRKPPRIRAYRGGYLPTERRETERAMRAGNIDGIVSTSALELGVDIGSLDVVILN
                     GYPGSVAATWQRFGRAGRRQQPALGVMVASSQPLDQYVVRHPDFFAEASPEHARIAPD
                     QPLILFDHIRCAAFELPFRVGDGFGPIDPEVFLEALAETEVIHREGERWEWIADSYPA
                     NAVSLRAVADGNFVVVDRSDGRQQIIAEVDYSAAALTLYEGAIHMVQSTPYQVETLDW
                     EGRKAYVTRTHVDYYTDSIDFTKLKVLDRFDGGVAGRGDSHHGEVHVVRRVAGYKKIR
                     YYTHENIGYGPVNLPDQELHTTAVWWQLPQALLLRAFASKQDALDGFLGAAYALHIVA
                     TVAVMADARDLQKSVGNGDGSWFAIADQSGRGQLRGSEGDPGVVELLQEFVPTVYLYD
                     NFPGGVGLSEPLWQRQAELVQRARELVQRCDCKAGCPACVGPVLAAQEEDETSPRALA
                     LRVLDLFDAEACQHVPDVVVTIRDPMELLAP"
     gene            complement(3984..4382)
                     /locus_tag="QEL58_001751"
     CDS             complement(3984..4382)
                     /locus_tag="QEL58_001751"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676229.1"
                     /translation="MAILLAMVVAAIAEWTARVCSRLRALRRASVLRTLNADEDAALA
                     PLRAMTGIAHDDQVRLLRGAFIGGAYRPRHPFNDGMLGGIPVLFPSAARDHMAAWNEA
                     EVVLADRCAVIVRLNGVQIATRSRSRRVRH"
     gene            4649..5170
                     /locus_tag="QEL58_001752"
     CDS             4649..5170
                     /locus_tag="QEL58_001752"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676230.1"
                     /translation="MAVAGRGSQGALLAGLLLVGFARAHAQQAVPVPDPAPAAPADAA
                     AATTAPVSTTPPQDNVTTLGEVRALKPEDDQPLDLYRFKNPVKFGDNRFSRDWSEPPS
                     PEQVSMSGGYIMMGVVKGVMAAAKGVNKLTGGPSQIQAAVARPPPELSAEQQRRALLF
                     SQEQNAGDAPPVK"
     gene            complement(5180..7312)
                     /locus_tag="QEL58_001753"
     CDS             complement(5180..7312)
                     /locus_tag="QEL58_001753"
                     /inference="COORDINATES: protein motif:HMM:NF018762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="intracellular growth attenuator family protein"
                     /protein_id="HDS1676231.1"
                     /translation="MSVFIIVKIILLLVALVAWLNYQSRRKDNQNALAALRRTQVVRE
                     LQDDEALALESLRVAHGLAWETGVRRLRGRFSRHGIIANGVETLHDTLGGVDVLLPYD
                     APLFLAEDNHADVVLTERQAIVVRLNDFSVVEGRSRSLHDGRTDGLPPGAPPLPAPPS
                     LAAQPVTTLEERAETFEEAQLRRRPAFGWLPAGFWIIALSLLLTATVADLGDALPLVM
                     LLAIAAALAGIVCQLRPPLRKIRPGRVRRVEGVLHRLEMPNPMNAALRLQRFFVGDSL
                     QVQVPVHWQQCGRLPLQQSVQLDIAQDTGDVLSIGPHWSRVDEQRRFPPIRWGGTLLL
                     LVIALLGAVTALLAGDGDDLRLAWHGLQGTQTRTDSRADSVLQDPPQPGDRVRLSGEG
                     QCELALTRLADTGTEVVLPDCARMRWGATTVMLPALAVPDPLLSLYRGSFVDAQKDGY
                     STMLRMLMMRQISDPYQQALMAARGEQQIVTALGRMIDTVEAACAVGLRDCAGLQQSI
                     VRALGASVEVDGQDTALDDWPKLAQHMRRLATEGEDGMYMTGSDLAALRGIAREHAGA
                     AIATRLAALTPQLISLQRGGVVLETPDDLRDGAQHAPRDPVRSDTLLDHWQEAGAVVA
                     TPVPFSLQGLVLSTRQDAGGLRLRVEPGASDDRIQRAVASSLMLLLSLTLIVVQAVLL
                     ARGILRARARRRALDADLQSRPAPGQPA"
     gene            complement(7556..9397)
                     /locus_tag="QEL58_001754"
     CDS             complement(7556..9397)
                     /locus_tag="QEL58_001754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012509662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676232.1"
                     /translation="MNASAVNLWIALALALIVVIASVRQLRGNTAHPGRRWIVIALQI
                     FVAALLYFCLVPPTRQQPAGGLVVLGTDAGKAGALPASEGPLLLLPEASDVPGAQRVP
                     DLATALRQHPASTLTLVGAGLAARDRDALLPPDVRWQAAPEPRGWIALQPPADVAPGA
                     RFDVQAQARGVAKAKAELLDPADSVVDRTDVAEDGRVKLSGIARAEGRSVFQLRLLDA
                     EGHVVDSAPVPQQTLPAAPMRLLVRASAPGPELKYLRRWAADAGIRVQVQADTGAGLS
                     VGDGAVSLDAATLARSDLLLLDERSLAALSAGQLATVRQALREGLGVLVRSAGAPSAS
                     ARQRLHDLGLPVQGDGSSRLLELPGDGESTILAARRGPLAAGTLPTGYGEEADRRSHS
                     ASLPALEVLALQVPGSSALLQDRAGTAIGGWRAAGKGRIGLLPMTDSWRWVLAGRDDR
                     HGELWSSVVATLARAQGSADALWSPQPISWAGERQTLCGVQAPLQVFNEGGDGVPLVV
                     DGATSTLRCAGWWPRDAGWQRLQHGDSIVWRYVFDPRAATALHRQVMIDATTQALVSS
                     TPANASVMQPVPGSRWPWWLAFVLCASLLWWLERRRMHDPRLTQPAP"
     gene            complement(9394..11550)
                     /locus_tag="QEL58_001755"
     CDS             complement(9394..11550)
                     /locus_tag="QEL58_001755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005407524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676233.1"
                     /translation="MNTLQHAWQRARRRRALITLLLGLPWALAATVLALRLAGFDVAC
                     VVGTVGLLACAAFATARARQLDRQWLQRQLDGSGASEDSADLLFAEATRLNPLQQRQR
                     SHVLATLERSMPELRPRWPRRALALCWIAGLAIALLALGWPRTNARPAAVAPAAQGSA
                     AAAGPLRLQSTRLRIDAPAYTGQATLTRNALDAKVAADSRLSWSLRFDRAPDKAWLQF
                     HDGRRLPLSAQDGQWQAHDVARAPALYRVVSEPALAEARLYRLDVVADRAPSVHVLEP
                     AASLVLGTPGQRQWALRFEASDDYGVAAQATLSITTTQGSGENITFVRRSVGLTGSGE
                     PTARRFAHTLNLAALGAQPGNDVIAQLEVRDNHAPTAQTGRSSSVILRLPSAEVALGA
                     ELEGRIKKTLPAYFRSQRQIIIDAEALIRQRRSLAAEDFVKRSDAIGVDQRILRLRYG
                     QFLGEESEGAPKPPPTSDLPTSDTPAADDHDHDHGAEAGAHDEHGHDHGGKSANADTP
                     PVFGSATDVLSEYGHTHDHAEAATLLDPQTRATLKAALDQMWSAEGELRQGRPEQALP
                     FAYKALGFIKQVQQAERIYLARVGPELPPIDEGRRLGGDRAGLASRELPLAARAAPDP
                     AIVEAWQRLGDATGTPDLDALAGWQQRNAAYLPDALDLAAAIEQLRIEPGCRDCRQRL
                     RAQLWRALQRPLPQAMRRSAADAMGQRYLDALEAQP"
     gene            complement(11547..12668)
                     /locus_tag="QEL58_001756"
     CDS             complement(11547..12668)
                     /locus_tag="QEL58_001756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019336353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BatA domain-containing protein"
                     /protein_id="HDS1676234.1"
                     /translation="MNLLFPLGLAALATWLLPLLIHLARRHPYTPLDFAALRWLRTQI
                     RPRQRIRFDDWPLLLVRLLLLAALALLLARPALTGPAPLPAAWTVVAPGLDATALRGT
                     AEEGNWHWLAPGFPAIDHAPPVSSASLPSLLRELDAQLPAGTALTVHVPDPLPGLDGA
                     RLQLSRDVQWHTQPMPVTPPQTAVALPRLRVHGEASATTQHWLNALQRAWGVQALPSP
                     LAEDVVPERGEIGVWSRNDALPANWQAWLRDGGLVMSAGKPAASARILLRDAEGVPLL
                     WQQRIGQGQLLSLPGDWNAASNAALRDPQLPRALLLALQPPTAPRLGDARDQAPHRAA
                     LPAVTPPPREPTPWLLLAIVLLFALERWMASSAQRRVAA"
     gene            complement(12665..13561)
                     /locus_tag="QEL58_001757"
     CDS             complement(12665..13561)
                     /locus_tag="QEL58_001757"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014035489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF58 domain-containing protein"
                     /protein_id="HDS1676235.1"
                     /translation="MSAGMPLTLPPELRARLRMLRLRPRLASGASGIGQHASRSRGAG
                     LEFAQYRAYEPGDELRQIDWKLYARSDRFFVRESERESPITAWLLLDATASASQADRA
                     APQRTRLDHMRGVAACLVELALQQGDRFGLLVINGDGLQLVPAASGARQRDRVHLQLH
                     ALQARGSWPAADRLRPLWERVRPGDLLLAIGDGFDEAGIVLLEQLASARREVGLLQIL
                     TADERDFLFDAGHRFRDPETGDELLGDGAAIRADYLQRFAAARTALQARLQAGGIAHA
                     SGWLDQPLDQPLQALFGRGSGA"
     gene            complement(13569..14552)
                     /locus_tag="QEL58_001758"
     CDS             complement(13569..14552)
                     /locus_tag="QEL58_001758"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005411841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MoxR family ATPase"
                     /protein_id="HDS1676236.1"
                     /translation="MTTPDLDSLLPRLDALRGALARVVVGQHSVVEQLLIGLLAGGHC
                     LLEGAPGLGKTLLVRSLGQALELQFRRVQFTPDLMPSDILGTELLEEDHGTGHRHFRF
                     QQGPIFTHLLLADELNRTPPKTQAALLEAMQERTVSYAGTTYALPAPFFVLATQNPIE
                     QAGTYPLPEAQLDRFLLHVLVDYPSEDEERQILEQTTGGATDAVPKVMDAEAVIALQA
                     AVRQVHVSPDVLAWITRLVRASRPGDGAPAAINQWVKWGAGPRAGQSLVLAAKARALL
                     QGRFAATREDVQALAAPVMRHRLLLSFAAEAEQKRADDVVAALLQAVPFPG"
     gene            complement(14569..15276)
                     /locus_tag="QEL58_001759"
     CDS             complement(14569..15276)
                     /locus_tag="QEL58_001759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005421001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4159 domain-containing protein"
                     /protein_id="HDS1676237.1"
                     /translation="MDRRACLRWLAAAASAAALPAWAQAGPRSSRYDFWFTRLQYDSG
                     DWDVDARMPSNLITSLIDYTSLRVDPQEHVVALADPRMLEAPFCYLAGHTLVEFNAAE
                     RQNFVRYVRNGGFVFVDDCNHDIDGLFATSFEAQMGRLFGPKALQKLPNSHALYRSFF
                     RFPDGPPATSFELNGWGDDLVHDYLKGIEVDGRLGLLYSNKDYGCEWDYDWRNKRFLA
                     EDNTRFGVNIVMYALNN"
     gene            complement(15276..16610)
                     /locus_tag="QEL58_001760"
     CDS             complement(15276..16610)
                     /locus_tag="QEL58_001760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007962710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TldD/PmbA family protein"
                     /protein_id="HDS1676238.1"
                     /translation="MSIFTEAQAKAILDKVIALSKADECTAVLAGAISGNIRFALNNV
                     STSGIVDNTELAVTVAFGKRVGTASINEFDDAALERVVRRAEDLARLAPENPEFMPAI
                     GKQSYRASPTFSESTAAIDPAFRAKVAADSIAPCRGHGLIAAGFLEDGQGFQATANSN
                     GNFAYQRTTSFDYTCTVRTEDGRGSGWVGRNLKDAADFKADQDIRIAMRKATESAEAK
                     ALEPGKYTVILEPAAAAGLISFMMNFFSARSADEGRSFLSKKGGGNKLGEQVYDPRVT
                     MIADPWHPDAPVLPWDGEGMPRERMAIIENGKIANLDYSRFWAQKQGKTAKATPGNLL
                     MSGGDKSTAELVRGTQKGILVTRTWYIRMVDPQTVLLTGLTRDGTFYIENGQIKHPVK
                     NFRFNESPVIMLNNIEELGKPVRVAGDESSYVMMIPPMKLRDFTFTSLSDAV"
     gene            complement(16632..18266)
                     /locus_tag="QEL58_001761"
     CDS             complement(16632..18266)
                     /locus_tag="QEL58_001761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005995434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TldD/PmbA family protein"
                     /protein_id="HDS1676239.1"
                     /translation="MQRRDFLALTGLTAGGLIVPSFFGKVIAAEQLQSSLDPALKKRL
                     ADAALQAARSAGATYCDVRIGRYLRQFVITREDKVQNVVNTESTGVGIRVIVNGAWGF
                     AATNALGTADVARAAQQAAAIAKANAGVQTAPVQLAKAPGVGEVSWRTPIRKNAMEVP
                     IKDKVDLLLDVNAAAMGAGASFVNSMLFLVNEQKYFASTDGSYIDQDVHRIWAPMTIT
                     AIDKASGKFRTREGLSSPMGLGYEYLDGAAAGKVVSPNGVVNYSTSYDMKEDAIAAAK
                     QAQEKLKAPSVKPGKYDLVLDPSHTWLTIHESIGHPLELDRVLGYEANYAGTSFATLD
                     KREQHFQYGSEHVNIFADKTQPGSLGAVAYDDEGVKCKRWDLISNGKLVDYQTIRDQA
                     HILGKTESDGCCYADSWSSVQFQRMANVSMAPGKQPLSVPDLIKDVENGIYIIGDGSF
                     SIDQQRYNAQFGGQLFYEIKNGQITRMLEDVAYQIRTPEFWNACTAVADERDYRLGGS
                     FFDGKGQPGQVSAVSHGSSTARFNGINVINTARSLG"
     gene            complement(18298..19929)
                     /locus_tag="QEL58_001762"
     CDS             complement(18298..19929)
                     /locus_tag="QEL58_001762"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014035494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TldD/PmbA family protein"
                     /protein_id="HDS1676240.1"
                     /translation="MQRREFLAVSGLGLAGLLLPHSRAIAAEQLLAPVDTAQRRRLAE
                     VALATARNAKASYCDVRIGRYLNQSVITREHQVGNVTNRESSGVGVRVIVNGAWGFAA
                     THQQTEAAVRAAVEQAAAIARANASIQTRPVQLAPTPSVGEVRWQTPIRRNAMQVPIQ
                     DKVELLLALNAAALNAGADYINSTLFLVNEQKYFASSDGSFIDQDIHRIWLPFTATAI
                     DKASGKFRTRAGLSSPMGMGYEFLEGDARGKVQLPGGITAYRDSYDPVEDAIAAARHA
                     REKLKAPSVKPGKYDLVLDPSNLFLTIHENVGHPLELDRVLGYEANYAGTSFATLDKR
                     DAGFRWGSDIVTFFADKTQPGSLGAVGYDDEGVKTQRWDLVRDGILVDYQATRDEAHI
                     LGRDASHGCSYADSWASVQFQRMANVSLAPGKQPLSVEDMIKDVENGIWIHGRGSYSI
                     DQQRYNAQFGGQLYYQIKDGKIAGMVEDAAYQIRTPEFWNACTAICDERDFRLGGSFF
                     DGKGQPGQVSAVSHGSSTTRFNGINIINTARSLGA"
BASE COUNT         3112 a         6696 c         7091 g         3231 t
ORIGIN      
        1 gctggcgcgc tcgatccggt tctgaccgtc cacctgcacg gtcacgcggt cctggcggaa
       61 gtccatggtc accgccatgc ccggcttgac cacccgcgcg ttgcgcgcgc cgctgtcggc
      121 caccagcttc ttgagggtgg cctcgtcggc ggtcttgccg gtgaaggcct cgagcgcctc
      181 cggcctgcat tcgtgcgcgg cgtcggccac tggcgttggc gcggcgtcgt gggtggtgct
      241 gctgccggcg tggctgcagg cggccagcgg caggatggca agcagggcaa gggggctgag
      301 gcgcattgtc gggctccacg cgtggatggt ggcgccagtg tcgccgccct ccccgtcagg
      361 gcatgtcaac ggggtttcac gctactgccc gaccaatgcc aacgtctcgc gctcgcgctg
      421 ttcttcgtgc accagccgct gcagcagcag ggccagggtc accacgtcct ggtggttgtg
      481 gtcggccacc cggcgcaggt tgactgcatc gccaccacgc aggaaacgca gccatgcgcc
      541 cggggcttcc gagccgggca ggtcgtcttc gcgcaccacg cgcagcagct ggcgttcgat
      601 ggtggacagc ttgcagttct cccacgtccc acgatagcgg cggcgagtgg gatagagcag
      661 atcgacatgg tccagcgcgc tgatcgggca acgctggcgt gccaaccggt agcgcgcctt
      721 cagcaacggc gcgtcgtagc tgcggccgtt gtagctgcac aacacggtgg acggctgcag
      781 ccagctggcg aaggtggcca gcatcgcgtc ctcggcggcc atcgtcgcca tcagcagctg
      841 gcggatgcgc aggccttcgc cgcgttgcgg gcacgcatgc cagtcggcgg ccccgatcat
      901 gaaggcgcgg gtgccggtgc cgccggccag gccggtggtt tcggtatcga agaacagcag
      961 gtcgcgcggg gatacgtgtt cgccttcgcg gcgggcgaaa tccagcgaca gcggctgtgc
     1021 cggaatcggc tgcgcctgca gcgactcgat caggaacagg cccggcgcga tttcctctcc
     1081 gggcagctgg cgatcctgcg cactggctcg caccggtgcg gaactgccgc gtgtgcgcag
     1141 gccgagcagg cgatgcaggc tgcccacctc gggccgacgc agcggtgcgg ggtgcgcaac
     1201 cggcgccgcc gcgccggtcg gcttgtggcg gatctcctgc tcgacccagg caaataccga
     1261 gcgctcggcc ggtggctgcc gtgcatcgtt ggcggccact ggggccggca ccgtcggtgg
     1321 cggcccgggc acggccggcg tgctcgcctt cgggtcgccg gcctgcttcc gcagcaggcg
     1381 cagcttgtcc aggctcaggc tcacggtgcc agcagctcca tcgggtcgcg gatggtcacc
     1441 accacgtcgg gcacgtgctg gcaggcttca gcatcgaaca gatccagcac gcgcaacgcg
     1501 agcgcacgcg gcgaggtctc atcctcttcc tgcgcggcca gaaccgggcc gacacaggcc
     1561 gggcagccgg ccttgcagtc gcagcgctgc accagttcgc gcgcgcgctg caccagttcg
     1621 gcctggcgct gccacagcgg ctcgctgagg ccaacgccac cggggaagtt gtcgtacagg
     1681 taaacagtgg gcacgaactc ctgcagcagc tcgacaacgc cagggtcgcc ctcgctgcca
     1741 cgcagctggc cacggccgct ctggtcggcg atcgcgaacc aggaaccatc gccgttgccc
     1801 acggacttct gcaggtcacg cgcatcggcc atcaccgcca cggtggcgac gatgtgcagc
     1861 gcatacgccg cgccgaggaa accatcgagc gcatcctgct tgctggcgaa cgcgcgcagc
     1921 aacagcgcct gcggcagctg ccaccacacc gcggtggtat gcagttcctg gtcgggcagg
     1981 ttcaccgggc cgtagccgat gttctcgtgg gtgtagtagc ggatcttctt gtagccggcg
     2041 acgcggcgca ccacgtgcac ctcgccatgg tgcgaatcgc cacggccggc cacgccgccg
     2101 tcgaagcggt ccagcacctt gagcttggtg aagtcgatgc tgtcggtgta gtaatccaca
     2161 tgcgtgcggg tgacgtaggc cttgcggcct tcccagtcca gcgtctctac ctggtagggc
     2221 gtggactgca ccatgtggat ggcaccctcg tacagggtga gtgcggcagc ggaatagtcg
     2281 acctcggcga tgatctgctg gcggccatcg ctgcgatcga ccaccacgaa gttgccatcg
     2341 gccaccgcac gcaggctgac tgcgttcgcc ggatagctgt cggcgatcca ttcccagcgt
     2401 tcgccttcgc ggtggatcac ctcggtttca gccagcgctt ccaggaacac ttccggatcg
     2461 atcgggccga agccatcgcc gacccggaac ggcagctcga aggctgcgca gcggatgtgg
     2521 tcgaacagga tcagcggctg gtccggggcg atgcgcgcgt gttcgggcga ggcctcggcg
     2581 aagaaatccg gatgccgcac cacgtactgg tccagcggtt gcgagctggc caccatcacg
     2641 cccagagcgg gctgctggcg acggccggcg cggccgaagc gctgccaggt ggccgccacg
     2701 ctgccggggt agccgttgag gatcaccacg tccaggctgc caatatccac gcccagctcc
     2761 agcgccgagg tgctgacgat gccgtcgatg ttgccggcgc gcatcgcacg ctcggtctcg
     2821 cggcgttcgg tgggcaggta gccaccgcga taggcgcgga tgcgcggtgg cttgcgcggg
     2881 tcgtggtcga agatgtcctt caggtacttg gtcagcacct cgaccatcag ccgcgtctgc
     2941 gcgaacacca gggtcttcag cccggacttg atcgcgatgc gcgcgatgcg gttgctctgc
     3001 gaacgcgccg aggcacgcag gcccaggtct gggttgatca ccggtggatt ccacagcagc
     3061 acctgcttgg gcccgctggg cgcaccggac tcggtgatgg cggtgaccgg cgcctcgatg
     3121 agggcctcgg catgcgcctg tggattgccg atggtggccg agcacaggat gaactgcggt
     3181 tgcacgccgt agaacgcgca gatgcgcttg agccggcgca gcacgttggt gacgtggctg
     3241 ccgaacacgc cgcggtaggt atgcacttcg tcgatgacga tgtagcgcag gttctcgaag
     3301 aactgcgccc acttggtgtg atgtggcagg atcgcctggt gcagcatgtc cgggttggag
     3361 accacgatat cgccgtgcag gcggatcgcc tggcgtgcgt cgccgggggt gtcgccgtcg
     3421 aaagtgaagg ccttcacccc caggtcgccg gcgcggttga gctccagcag ctcggccacc
     3481 tggtcctggg ccagtgcctt ggtggggaac aggtacagcg ccttggcctt gtcctgcatc
     3541 gccgcgctga ccaccggcag ggtgtagcac agcgacttgc cgctggcggt gggggtgacg
     3601 atggccacat gctcgccgcg ctggctggct tcccaggcct cggcctggtg gctgtacagc
     3661 tgctcgatgc cgcgtgcctt cagtgccgcg gccagggcgg gcggtaccgc atcgggaata
     3721 ggcgcgtagc ggccttcgcg gccgggaatg gcgaagctgc cggtgatgcg gtcctggtag
     3781 cggcgctgca ggcgcgcact gagcagagca ccgtcgcggg cgggcaggcc gtcgcgggta
     3841 gcgagcttct gctcggcgtc ggcggtgcgc ttggcgagtt cgtaggccat ggaaagtgga
     3901 gccgggacgg tttacgaggg gtcacatggc accacattca cgtctcagga tgtgagacgt
     3961 cgtgcgcgaa gggcgtgaac cgttcagtgc cggacgcggc gtgagcgtga ccgggtggcg
     4021 atctgcacgc cgttgaggcg gacaatgacc gcgcaacggt cggcaagcac cacctccgct
     4081 tcgttccagg cggccatgtg gtcgcgtgca gcggacggaa acagcacggg aatgccaccc
     4141 agcatgccat cgttgaacgg gtgcctgggg cggtaagcgc cccctatgaa cgcgccgcgc
     4201 agcaatcgaa cctgatcgtc gtgggcgatg cccgtcattg cgcgcagggg cgccagagcg
     4261 gcgtcctcgt cagcgttcaa tgtgcgtagc acgctggccc tgcgcagcgc acgcagcctg
     4321 ctgcacacgc gtgccgtcca ttcggcaatg gccgccacga ccatcgccag caggattgcc
     4381 acgccaacca gcactgctgc gcgcgacatc agcaggcgaa cgggtgcggc ggtaggaggg
     4441 tggagggagc tgacatgggg gaggccgtag cgggaacagc acaggatgca ggccccgccc
     4501 cgcgggggga atgaagttcg ttgcaaactt cggcggtgct ggccgcgcat cggccaggcg
     4561 tgacacaccc tgaatgcctc tgccgacgcc aacgaaatct gaagcccgca tccgtatcct
     4621 tgttcacagg acgcaaccaa cagggtggat ggcggtggca ggacgtggat cgcagggcgc
     4681 actgctggct ggcctgttgc tggttgggtt tgcgcgcgcg cacgcgcagc aggccgtgcc
     4741 ggtgcccgat cccgcgcccg ctgcccccgc agatgctgcg gcggcaacca ccgcgccggt
     4801 gtccaccacc ccgccgcagg acaacgtcac caccctcggc gaagtgcggg cgctcaagcc
     4861 cgaagacgac cagccgctgg acctgtaccg cttcaagaac ccggtgaagt tcggtgacaa
     4921 ccgcttcagc cgcgactgga gcgagccgcc gtcgccggaa caggtcagca tgagcggcgg
     4981 ctacatcatg atgggcgtgg tcaagggggt catggcggcc gccaagggcg tgaacaagct
     5041 cacgggtgga ccttcgcaga tccaggccgc cgtggcgcgg ccaccgccgg aactcagtgc
     5101 ggagcagcag cgacgcgcgc tgctgttctc ccaggaacag aatgctggcg acgcgccgcc
     5161 ggtgaagtag ccgcgccgct caggccggtt ggcccggtgc cgggcgtgac tgcaggtcgg
     5221 cgtctagcgc gcgtcgccgg gcgcgggcgc gcaggatgcc ccgcgccagc aggaccgcct
     5281 gcaccacgat cagcgtcagt gacagcagca gcatcaggct gctggccact gcacgctgga
     5341 tgcggtcatc ggaggcgcca ggttccacgc gcaggcgcag accgcctgcg tcctgccggg
     5401 tggacagcac gagcccctgc aacgagaacg gtacaggggt tgcgaccacc gcccctgcct
     5461 cctgccagtg atcgagcagg gtgtcggaac gcacggggtc ccgcggtgcg tgttgcgctc
     5521 cgtcacgcag gtcatcgggc gtttccagca ccacgccgcc gcgctgcagg ctgatcaact
     5581 gcggtgtgag cgctgctaat cgggtggcga tggcggcacc ggcatgctcg cgggcgattc
     5641 cacgcagtgc ggcgaggtcg ctgccggtca tgtacatacc gtcctcgccc tccgtggcca
     5701 gccggcgcat gtgctgggcc agtttcggcc agtcgtccag tgcagtgtcc tggccgtcca
     5761 cctccaccga tgcaccgagc gcgcgaacga tggactgctg caaccctgcg cagtcgcgca
     5821 ggccgaccgc gcaggcggct tcgaccgtat cgatcatgcg gccgagcgcc gtcactatct
     5881 gctgctcgcc gcgcgcggcc atcagcgcct gctgataggg atcgctgatc tgccgcatca
     5941 tcagcatgcg cagcatcgtc gaatagccgt ccttctgcgc atcgacgaaa ctgccgcgat
     6001 acagtgacag caacgggtcg ggcaccgcca gcgcaggcag catcaccgtc gtggcgcccc
     6061 agcgcatccg cgcgcaatcc ggaagcacca cctccgtgcc ggtgtcggcc agccgggtca
     6121 acgcgagttc gcattggcct tctccactga gccgcacgcg gtcaccgggc tgcggaggat
     6181 cctgcagcac gctgtcggca cggctgtcag tccgcgtctg ggtgccctgc agcccatgcc
     6241 aggccaggcg gaggtcgtcg ccgtcaccgg ccagcagtgc ggtcaccgcc cccagcagcg
     6301 cgatcaccag gagcagcaga gtgccgcccc agcggatcgg cgggaaacgg cgctgctcat
     6361 ccacccgcga ccagtgcggg ccgatcgaca ggacgtcgcc ggtgtcctgg gcgatgtcca
     6421 gctgcacgct ctgctgcagc ggaaggcgcc cgcactgctg ccagtgcacc gggacctgta
     6481 cctgcaggct gtcgccgacg aagaagcgtt gcagccgcag cgcggcattc attggattgg
     6541 gcatctccag ccgatgcagg acgccctcta cgcgacggac ccggccaggc cggatcttgc
     6601 gcagcggcgg gcggagctgg cacacgatac cggccagggc cgccgcaatg gccagcagca
     6661 tgaccagcgg cagcgcatcg cccaggtcgg cgacggtggc cgtcaacagc agtgaaagcg
     6721 cgatgatcca gaagccagcg gggagccatc cgaacgcggg ccgccgccgc agctgcgctt
     6781 cctcgaaggt ctcggcacgc tcttccagtg tcgtgaccgg ctgggcggcc aaggacgggg
     6841 gcgcgggcag tggcggggca ccaggcggga gcccgtcggt acggccgtcg tgcaggctgc
     6901 ggctgcgtcc ttcgacaacg gaaaaatcat tgagccgcac cacgatggcc tgacgctccg
     6961 tcagcacaac gtcggcgtgg ttgtcctcgg ccaggaacaa gggcgcatcg tagggcagca
     7021 gcacgtccac gccaccgagg gtgtcgtgga gtgtttcgac gccgttggcg atgatgccgt
     7081 ggcggctgaa gcggccacgc aggcgacgca caccggtttc ccacgcgagg ccgtgggcaa
     7141 cgcggaggga ctccagggcc agcgcttcgt cgtcctgcag ttcacggacg acctgggtgc
     7201 ggcgcagggc ggccagcgca ttctggttgt ccttgcgccg cgactggtag ttcagccaag
     7261 ccaccagcgc cacgagcagc aggatgatct tgacgatgat gaagacgctc atcggcgcac
     7321 cccgcccgaa ggctgacgat acgcgatggc aggggatggg aatgggaatg tgcgtgatgc
     7381 acacgacatc gtgtcgatca tggctccctc ctggagctgt ccgtccgcgt accagtctgc
     7441 ctcgggtggc cggcacaggg caaacccagc ggttccggca ctgcccgatc cgggcacgtc
     7501 tgttgatatg cgcagaggcg gactatcgag gtgcggctac ctgccgtcgc ctgccctacg
     7561 gtgctggttg cgtcaatcga gggtcgtgca tgcgccgccg ttccagccac cacagcagcg
     7621 aggcgcacag cacgaacgcc agccaccacg gccagcgcga tcctggcacg ggttgcatca
     7681 ctgatgcgtt cgccggcgtg ctggagacca acgcctgagt agtcgcatcg atcattacct
     7741 gacgatgcag cgcggtcgcg gcccttgggt cgaacacata gcgccagacg atgctgtcgc
     7801 catgctgcag gcgctgccag cctgcgtcac gtggccacca gccggcgcag cgcagggtcg
     7861 aggtcgcgcc atcgacgacc agcggtactc cgtcgccacc ttcgttgaag acctgcagcg
     7921 gcgcctgcac gccgcacagc gtctgccgtt cgcctgccca gctgatcggc tgcggtgacc
     7981 agagcgcatc agcgctgccc tgtgcacgcg ccagcgtggc caccacgctg ctccacagtt
     8041 cgccgtggcg gtcgtcgcgc ccggcgagca cccagcgcca gctgtcggtc atcggcagca
     8101 ggccgatgcg gcccttgcca gccgcgcgcc agccgccgat ggcggtgcca gcacgatcct
     8161 gcagaagcgc gctgctgccc ggcacctgca gcgccaggac ttccagcgcg ggtagggagg
     8221 cactgtgcga acggcggtcg gcctcctcac cgtagccggt cggcaacgtg ccggcggcga
     8281 gcgggccgcg tcgtgcggcg aggatcgtgc tttcgccatc gccgggaagt tcaaggaggc
     8341 ggctgctgcc atcgccctgc accggcaggc ccagatcgtg cagtcgctgg cgcgcgctgg
     8401 ccgaaggcgc gcctgcactg cgcaccagca cgccgagtcc ctcgcgcagc gcctggcgca
     8461 cggtggccag ctggcctgca ctcaacgctg ccaggctgcg ttcgtccagc agcagcaggt
     8521 cgctgcgtgc cagtgttgca gcatcgagcg aaaccgcgcc atcacccacg ctgagcccgg
     8581 cgccggtatc ggcctgcacc tgcacgcgga tgccggcatc ggcggcccag cggcgcaggt
     8641 acttcaactc cgggcccggc gcactggcac gcaccagcag ccgcatgggg gcggccggca
     8701 gggtctgctg cggcaccggc gcgctgtcca ccacatggcc ttcggcatcg agcaggcgca
     8761 gctggaacac gctgcggcct tcggcgcggg cgatgccgct gagcttcacg cgcccgtcct
     8821 cggcaacgtc cgtgcgatca accacgctgt cggcagggtc gagcagttct gcctttgctt
     8881 tggccacgcc acgcgcctgt gcctggacgt caaaacgagc accgggagcg acatcggccg
     8941 gtggttgcag cgcgatccag ccgcgcggct ccggtgccgc ctgccaacgt acatccggcg
     9001 gcaacaacgc atcgcgatca cgtgcggcca gacctgcacc gaccagtgtc agtgtggacg
     9061 ccggatgctg gcgcagcgcg gtggccaggt cgggaacgcg ttgcgcgccg ggcacatcag
     9121 aggcttcggg caaaagcaac agcgggcctt cgctggccgg gagcgcgccg gccttgccgg
     9181 catcggttcc gagcacgacc agcccgcctg cgggttgctg gcgggtgggc ggcaccaggc
     9241 agaaatacag cagcgcggcg acgaagatct gcagtgcgat cacgatccac cggcggccag
     9301 ggtgcgcggt gtttccacgc agctggcgca cgctggcgat gaccacgatc agggcgagtg
     9361 ccagtgcaat ccacaggttc acagcggagg cgttcatggc tgcgcctcca gcgcatcaag
     9421 gtaacgctgc cccatcgcat cggcggcact gcgccgcatc gcctgcggca gcggacgctg
     9481 cagcgcccgc cacaactgtg cacgcaggcg ctggcgacag tcgcggcagc cgggttcgat
     9541 gcgcagctgc tcgatggccg cagccaggtc cagagcgtcg ggcaggtagg cggcattgcg
     9601 ttgctgccag ccggccagcg catcgagatc tggcgtgccg gtggcgtcgc cgagacgttg
     9661 ccaggcttca acgatggccg ggtccggtgc cgcgcgtgcg gccaaaggca gttcacggct
     9721 tgccaagccg gcacgatcgc ctcccagccg ccggccttca tcgatcggtg gcagctccgg
     9781 tccaacccgg gccagataga tgcgttcggc ctgctgcacc tgcttgatga agccgagcgc
     9841 cttgtaggcg aacggcagcg cctgctccgg gcgaccctgg cgcagctcgc cctcggccga
     9901 ccacatctgg tcaagcgcgg ccttcagcgt ggcgcgggtc tgtgggtcga gcagggtggc
     9961 cgcttcggca tggtcgtggg tatgcccata ctcggagagc acatcggtgg cgctgccgaa
    10021 caccggtggc gtatcggcgt tggcagactt gccgccgtga tcgtggccat gttcatcgtg
    10081 cgctccggcc tcggcaccat ggtcgtgatc gtggtcgtct gcggcgggcg tatcgctggt
    10141 gggcaggtcg ctggtcggcg gcggcttcgg tgcaccttcg ctttcctcgc ccaggaactg
    10201 gccatagcgc aggcgcagga tgcgctggtc gacaccgatc gcatcgctgc gcttcacgaa
    10261 gtcttcggca gccaggctgc ggcgctgccg gatcaaggct tcggcatcga tgatgatctg
    10321 ccgctggctg cggaagtagg ccggcagtgt cttcttgatg cggccttcca gttcggcacc
    10381 gagtgccacc tcggcgctgg gcaggcgcag gatcacgctg ctgctgcgcc cggtctgcgc
    10441 cgtcggcgca tggttgtcgc gcacttccag ctgcgcgatc acatcgttgc cgggttgcgc
    10501 gcccagcgcg gcgaggttga gcgtatgcgc gaagcggcgt gcagtcggtt cgccgctgcc
    10561 ggtgaggccg acgctgcgcc tcacgaaggt gatgttctcg ccgctgccct gggtggtggt
    10621 gatcgacagc gttgcctgcg cggccacgcc atagtcgtcg ctggcctcga agcgcagcgc
    10681 ccactggcgc tgcccgggcg tgcccagcac aaggctggcg gccggttcca gcacgtgcac
    10741 gctgggtgca cggtcggcga ccacgtccag ccgatacaga cgggcttcgg ccagcgccgg
    10801 ttcgctcacc acgcggtaca gcgccggcgc gcgcgccaca tcgtgggcct gccattgtcc
    10861 gtcctgcgcg ctcagcggca ggcgtcggcc atcgtggaac tgcagccagg ccttgtccgg
    10921 cgcacggtcg aagcgcaacg accacgacag ccggctgtcg gcggccacct tggcatccag
    10981 cgcattccgg gtgagcgtgg cctggccggt ataggccggc gcgtcgatgc gcaggcgggt
    11041 ggactgcagg cgcagtgggc ctgcggcggc agcgctgcct tgcgctgcag gcgcaacggc
    11101 cgcggggcgg gcgttcgtgc gcggccaacc cagtgccagc agcgcgatgg ccaggcccgc
    11161 gatccagcac agtgccaatg ctctgcgcgg ccagcgcggt cgcagctccg gcatgctgcg
    11221 ctccagcgtg gccagcacgt gcgagcgttg gcgctgctgc agcggattga gcctggtggc
    11281 ctcggcgaac agcaggtcag cgctgtcctc gctggcaccg ctgccatcga gctggcgctg
    11341 cagccattgc cggtccagct ggcgggcacg tgcggtggcg aaggccgcgc aggcgagaag
    11401 gccgaccgtg ccgaccacgc aggcgacatc gaagccggcc aggcgcagcg ccagtaccgt
    11461 tgcggccagc gcccacggca ggcccagcag cagggtgatg agcgcacggc ggcggcgcgc
    11521 gcgttgccag gcgtgctgca gggtgttcat gcggccaccc tgcgttgggc actgctggcc
    11581 atccagcgtt ccagcgcgaa cagcagcacg atggccagca acagccaagg cgtcggctca
    11641 cgcggcggtg gtgttacagc aggcaacgcg gcccggtgcg gcgcctggtc acgtgcatcg
    11701 cccagccgcg gagccgtggg cggctgtagc gccagcagca gggcacgtgg caactgcgga
    11761 tcgcgcagcg cagcgttgct ggcggcattc cagtcgccgg gcaacgacag cagttggcct
    11821 tggccgatgc gttgctgcca tagcagcggt acgccctcgg cgtcgcgcaa caggatgcgg
    11881 gcgctggcag caggcttgcc ggcactcatg acaagaccgc cgtcgcgcag ccacgcctgc
    11941 cagttcgccg gcagtgcatc gttgcggctc cacacgccaa tctcgccgcg ttcgggcaca
    12001 acatcctccg ccaagggcga gggcagtgcc tgcacgcccc acgcgcgctg cagtgcgttc
    12061 aaccagtgct gggtagtggc ggatgcctcg ccgtgcacgc gtagtcgagg cagtgccact
    12121 gccgtctgcg gcggtgtgac cggcatcggc tgcgtgtgcc attgcacgtc gcgcgacagc
    12181 tgcaggcggg cgccatccag gccaggcaag ggatcgggaa cgtgcacggt caacgcggtg
    12241 cccgcgggca gctgtgcgtc cagttcacgc aacaggctgg gcagcgatgc gctggatacc
    12301 ggtggcgcat gatcgatggc ggggaagccg ggtgccagcc agtgccagtt gccctcttcg
    12361 gcggtgccgc gcagtgcggt cgcgtccaac cccggtgcca cgaccgtcca cgccgcgggg
    12421 agcggggcag ggccggtcaa cgctggccgc gccagcaaca gggccagcgc ggccagcaac
    12481 agcaggcgca ccagcagcag cggccaatca tcaaagcgga tgcgctggcg cggccggatc
    12541 tgtgtgcgca accagcgcag cgcagcgaaa tccagcggcg tatacggatg gcgccgggcg
    12601 aggtggatca gcagcggcag cagccaggtg gccagcgccg ccaggcccag cgggaacaac
    12661 aggttcatgc gccgctccca cggccgaaca gcgcctgcag cggttggtcc agcggctggt
    12721 cgagccagcc gctggcatgg gcgatgcccc cggcctgcag ccgcgcctgc aaggcggtgc
    12781 gtgcagcggc aaagcgctgc aggtagtcgg cgcggatcgc cgcgccgtcg cccagcagtt
    12841 cgtcgccggt ttcgggatcg cggaaacgat ggccggcatc aaaaaggaaa tcccgctcgt
    12901 cggccgtcag gatctgcagc agccccacct cgcggcgcgc gctggccagc tgttccagca
    12961 ggacgatgcc cgcctcatcg aaaccatcgc cgatcgccag cagcaggtcg cccgggcgca
    13021 cgcgctccca cagggggcgc agtcgatcgg cggcgggcca gctgccgcgc gcctgcagcg
    13081 catgcagctg cagatgtacc cggtcgcgct gtcgcgcacc gctggcggca ggcaccagtt
    13141 gaagcccatc gccattgatc accagcaggc caaagcggtc accctgctgc agggccagtt
    13201 cgaccaggca ggcggccacg ccgcgcatat ggtccaggcg cgtgcgctgc ggtgctgcgc
    13261 gatcggcctg gctggccgag gcggtggcat cgagcagcag ccaggccgtg atcgggcttt
    13321 cgcgttccga ttcgcgcacg aagaagcgat ccgaacgcgc gtacagcttc caatcgatct
    13381 ggcgcagctc gtcacccggc tcgtaggcac ggtactgcgc gaactcaagg ccggcgccgc
    13441 ggctgcggct ggcatgctgg ccgatgccgc tggcaccact ggccaggcgt ggccgcaggc
    13501 gcagcatgcg caggcgcgca cgcagttccg gtggcaacgt cagcggcatg cctgcactca
    13561 cgcctggatc aacccgggaa cggcacggcc tgcagcaggg cggcgaccac gtcgtcggca
    13621 cgcttctgct cggcctcggc ggcgaacgac agcagcaggc ggtggcgcat caccggtgcg
    13681 gccagcgcct gcacatcctc gcgggtggca gcgaagcggc cctgcagcag ggcgcgtgct
    13741 ttcgccgcga gcaccagcga ctgcccggca cgcgggccgg caccccattt cacccactgg
    13801 ttgatcgcgg ccggcgcgcc atcgccgggc cggctggcgc gcaccaggcg ggtgatccag
    13861 gccagcacgt cggggctgac atgcacctgg cgcacagcgg cctgcaaagc gatcaccgcc
    13921 tcggcgtcca tcaccttcgg tactgcgtcg gtggcgccgc cggtggtctg ttccaggatc
    13981 tgccgttcct cgtcctcgct ggggtaatcc accagcacgt gcagcaggaa acggtccagc
    14041 tgcgcttcgg gcagtgggta ggtacccgcc tgttcgatcg ggttctgcgt ggccagcacg
    14101 aagaacggcg caggcaatgc ataggtggtg ccggcgtagc tgaccgtgcg ttcctgcatc
    14161 gcctccagca gcgcggcctg ggtcttgggc ggggtgcggt tgagttcgtc ggccagcagc
    14221 aggtgggtga agatcgggcc ctgctggaag cggaaatggc gatggccggt gccgtggtct
    14281 tcttccagca gttcggtgcc gaggatgtcg ctgggcatca gatcgggcgt gaactgcacg
    14341 cgccggaact gcagctccag tgcctgcccc agcgagcgca ccagcagggt cttgccgagg
    14401 cctggcgcac cttccagcag gcaatggccg ccggccagca ggccgatcag cagctgttcg
    14461 accacgctgt gctggccgac cacgacacgg gccagggcgc cgcgcagcgc atccaggcgc
    14521 ggcagcaggg aatcgaggtc gggggtggtc atgggcgtgc aggtcctgtc agttgttcag
    14581 cgcgtacatt acgatgttga cgccgaaacg ggtgttgtct tcggccagga aacgcttgtt
    14641 gcgccagtcg tagtcccact cgcagccgta atccttgttg ctgtagagca ggcccaggcg
    14701 gccatcgacc tcgatgccct tcaggtagtc gtgcaccagg tcatcgcccc agccgttgag
    14761 ctcgaagctg gtggcgggcg ggccgtccgg gaagcggaag aaactgcggt acagcgcgtg
    14821 gctgttgggc agcttctgca atgccttcgg cccgaacagg cggcccatct gcgcctcgaa
    14881 cgaggtggcg aacaggccat cgatgtcgtg gttgcagtcg tcgacgaaca cgaagccgcc
    14941 attgcgcacg tagcgcacga agttctgccg ctcggcggcg ttgaactcga ccagcgtgtg
    15001 cccggccagg tagcagaacg gcgcttccag catgcgcggg tcggccagtg ccaccacgtg
    15061 ctcctgcggg tccacgcgca gcgaggtgta gtcgatcagc gaggtgatca ggttggacgg
    15121 catgcgcgcg tccacgtccc agtcaccgga gtcgtactgc aggcgggtga accagaagtc
    15181 gtagcgcgaa ctgcgcgggc ctgcctgcgc ccaggccggc agcgcagccg ccgaagcggc
    15241 agcggccaac cagcgcaggc aggcccggcg atccatcaga ccgcgtcgga cagcgaggtg
    15301 aaggtgaaat cgcgcagctt catcggcgga atcatcatca catagctgga ttcatcgccg
    15361 gccacgcgca ccggcttgcc cagctcttcg atgttgttga gcatgatcac cggcgactcg
    15421 ttgaagcgga agttcttcac cgggtgcttg atctggccgt tctcgatgta gaaggtaccg
    15481 tcgcgggtca ggccggtcag cagcacggtc tgcggatcga ccatgcggat gtaccaggtg
    15541 cgggtgacca ggatgccctt ctgggtgcca cgcaccagct cggcggtgct cttgtcgcca
    15601 ccgctcatca gcaggttgcc cggggtggcc ttggcggtct tgccctgctt ctgggcccag
    15661 aagcgcgagt agtccaggtt ggcgatcttg ccgttctcga tgatcgccat gcgctcgcgt
    15721 ggcatgcctt cgccgtccca cggcagcacc ggtgcatccg gatgccatgg gtcggcgatc
    15781 atggtcacgc gcgggtcgta gacctgctcg cccagcttgt tgccaccgcc cttcttcgac
    15841 aggaagctgc ggccttcatc ggccgagcgt gcactgaaga agttcatcat gaagctgatc
    15901 aggcccgcgg ccgccgccgg ttccaggatc accgtgtact tgcccggctc cagcgccttg
    15961 gcttcggccg attcggtggc cttgcgcatg gcgatgcgga tgtcctggtc ggccttgaag
    16021 tccgccgcgt ctttcaggtt gcggccgacc cagcccgaac cgcggccgtc ttcggtgcgc
    16081 accgtgcagg tgtagtcgaa gctggtggtg cgctggtagg cgaaattgcc gttgctgttg
    16141 gcggtggcct ggaagccctg gccatcctcg aggaagccgg cggcaatcag gccatgcccg
    16201 cggcacggcg cgatcgaatc ggcggcaacc ttggcacgga acgccggatc gatcgcggca
    16261 gtggattcgc tgaaggtcgg gctggcgcgg tagctctgct tgccgatggc cggcatgaac
    16321 tccgggttct ccggggccag gcgcgccagg tcttcggcac ggcgcaccac ccgttccagt
    16381 gcggcatcgt cgaactcgtt gatcgaggcg gtgccgacgc gcttgccgaa ggcaacggtg
    16441 accgccagtt cggtgttgtc gacgatgccg ctggtggaca cattgttcag cgcgaaacgg
    16501 atgttgccgc tgatcgcgcc ggccagcacg gcggtgcact catcggcctt ggacagggcg
    16561 atgaccttgt cgaggatggc cttggcctgg gcttcggtga agatactcat ggtgtaaggg
    16621 ctcctgaccg gtcagccgag gctgcgtgcg gtgttgatga cgttgatgcc gttgaagcgc
    16681 gcggtcgacg aaccgtgcga gaccgccgaa acctggccgg gctggccctt gccgtcgaag
    16741 aacgaaccgc ccaggcggta gtcgcgctcg tcggccacgg cggtgcaggc attccagaat
    16801 tccggcgtgc ggatctggta ggccacgtct tccagcatgc gggtgatctg gccgttcttg
    16861 atctcgtaga acagctggcc gccgaactgc gcgttgtagc gctgctggtc aatcgagaac
    16921 gaaccgtcac cgatgatgta gatgccgttt tccacgtcct tgatcaggtc cggcacgctc
    16981 agcggctgct tgcccggtgc catcgacacg ttggccatgc gctggaactg cacgctggac
    17041 cacgagtcgg catagcagca gccgtcggac tcggtcttgc cgaggatgtg ggcctggtcg
    17101 cggatggtct ggtagtccac cagcttgccg ttgctgatca ggtcccagcg cttgcacttc
    17161 acgccttcat cgtcgtacgc caccgcgccg aggctgcccg gctgggtctt gtcggcgaag
    17221 atgttgacgt gctcgctgcc gtactggaag tgctgttcgc gcttgtccag ggtggcgaag
    17281 ctggtgccgg catagttggc ttcgtagccg agcacgcggt ccagttccag cgggtggccg
    17341 atcgactcgt ggatggtcag ccaggtgtgc gacgggtcga gcaccaggtc gtacttgccc
    17401 ggcttcaccg acggtgcctt cagcttctcc tgcgcctgtt tggcggcggc gatggcgtcc
    17461 tccttcatgt cgtaggaggt gctgtagttg accacgccgt tcgggctgac caccttgccg
    17521 gcggcggcgc catcgaggta ttcgtagccc aggcccatcg gcgaggacag gccctcgcgg
    17581 gtacggaact tgccgctggc cttgtcgatc gcggtgatcg tcatcggtgc ccagatgcga
    17641 tgcacgtcct ggtcgatgta ggagccatcg gtggaggcga agtacttctg ctcgttgacc
    17701 aggaacagca tcgaattgac gaagctggca ccggcgccca tcgcggcggc gttgacatcc
    17761 agcagcaggt cgaccttgtc cttgatcggc acctccatgg cgttcttgcg gatcggcgtg
    17821 cgccagctca cctcgcccac gcccggcgcc ttggccagct gcaccggtgc ggtctgcacg
    17881 ccggcattgg ccttggcgat cgctgccgcc tgctgcgcgg ccctggccac gtcggcggtg
    17941 cccagcgcat tggtggcggc gaagccccag gcaccgttga cgatcacgcg gatgcccacg
    18001 ccggtggact cggtgttcac cacgttctgc accttgtcct cgcgggtgat cacgaactgg
    18061 cgcaggtagc ggccgatgcg cacgtcgcag taggtggcac cggcactgcg cgcggcctgc
    18121 agggcggcgt cggccaggcg cttcttcaac gccgggtcga ggctggactg cagctgctcg
    18181 gcggcgatca ccttgccgaa gaaggagggc acgatcagcc cgcccgcggt aagcccggtc
    18241 agggccagga agtcacgtct ttgcaaggct gctctccatg tcgaaggatg gggtggctca
    18301 agcgccgaga ctgcgcgcgg tgttgatgat gttgatgccg ttgaagcggg tggtggacga
    18361 accgtgcgaa accgccgaga cctggccggg ctggcccttg ccatcgaaga acgaaccacc
    18421 caggcggaaa tcgcgttcat cgcagatggc ggtgcaggcg ttccagaact ccggcgtgcg
    18481 aatctggtaa gccgcgtcct cgaccatgcc ggcgatcttt ccgtccttga tctggtagta
    18541 cagctggccg ccgaactgcg cgttgtagcg ctgctggtcg atcgaatacg aaccgcggcc
    18601 gtggatccag atgccgttct ccacgtcctt gatcatgtcc tcgacgctga gcggctgctt
    18661 gcccggcgcc agcgagacat tggccatgcg ctggaactgc acgctggccc aggaatcggc
    18721 atagctgcag ccgtgcgatg cgtcgcggcc gaggatatga gcttcatcgc gggtggcctg
    18781 gtaatcgacc aggatgccgt cgcgcaccag gtcccagcgc tgggtcttca ccccttcgtc
    18841 gtcatagccg accgcgccga ggctgcccgg ctgggtcttg tcggcgaaga aggtgacgat
    18901 gtcgctgccc cagcggaagc cggcatcgcg cttgtccagc gtggcgaagc tggtgccggc
    18961 gtagttggct tcgtagccga gcacgcggtc cagctccagc gggtggccga cgttctcgtg
    19021 gatggtcagg aacaggttgg acgggtccag caccaggtcg tacttgccgg gcttcaccga
    19081 cggcgccttc agcttctcgc gcgcgtggcg ggccgcggcg atggcgtcct cgaccgggtc
    19141 gtaggaatcg cggtaggcgg tgatgccacc gggcagctgg accttgccgc gcgcatcacc
    19201 ctcgaggaac tcgtagccca tgcccatcgg cgaggacagt ccggcgcggg tgcggaattt
    19261 gccgctggcc ttgtcgatgg cggtggcggt gaacggcagc cagatgcggt ggatgtcctg
    19321 gtcgatgaac gagccatcgc tggaggcgaa gtacttctgt tcgttgacca ggaacaacgt
    19381 ggaattgatg tagtcggcac ccgcattcag tgcggcggca ttgagcgcca gcagcagctc
    19441 gaccttgtcc tggatcggca cttgcatggc attgcggcgg atcggcgtct gccagcgcac
    19501 ctcacccacc gacggcgtcg gtgccagctg caccggacgg gtctggatgc tggcgttggc
    19561 gcgggcgatt gcagcggcct gctcgaccgc cgcgcgtacc gccgcctcgg tctgctgatg
    19621 ggtggcggca aagccccagg caccgttgac gatcacccgc acgcccacgc cggacgactc
    19681 gcggttggtc acattgccga cctggtgctc gcgggtgatg accgactggt tgaggtagcg
    19741 gccgatgcgg acgtcgcagt agctggcctt ggcgttgcgc gcggtggcca gggcgacctc
    19801 ggccaggcgc cggcgctggg cggtatcgac cggggccagc agctgctcgg cagcgatggc
    19861 tcgggaatgc ggcagcagca ggccggccag gcccagaccg gaaacagcca ggaactcacg
    19921 tcgttgcaca gcgtctctct ctctcgcttg cgtgcggttg gcaatgggcc ggaccgatca
    19981 cgtcaactcc tcgactttcg ccagcgcagc ggctgcgggc aagtgactgc agtcatggta
    20041 ggggtgggtt tcggcagggc tgcgccctgc acctgctcaa tgcaacggca acggccaaag
    20101 ccagagccag agcggcattc cgtgggttgg
//
LOCUS       DAOKIP010000057        19838 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.057,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000057 DAOKIP010000000
VERSION     DAOKIP010000057.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 19838)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19838)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19838
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.057"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(64..675)
                     /locus_tag="QEL58_001763"
     CDS             complement(64..675)
                     /locus_tag="QEL58_001763"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011037422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase"
                     /protein_id="HDS1676241.1"
                     /translation="MAYTLPKLSYAYDALEPHIDAATMEIHHTKHHQTYINNVNAALE
                     GTEYADLPVEELVKKLKSLPENLQGPVRNNGGGHANHSLFWTVMAPNAGGNPVGDVAK
                     AIDKDLGGFDKFKDAFTKAALTRFGSGWAWLSVTPDKKVVVESTGNQDSPLMEGNTPI
                     LGLDVWEHAYYLKYQNRRPEYIGAFFNVIDWNEVERRYQEAIA"
     gene            894..1346
                     /locus_tag="QEL58_001764"
     CDS             894..1346
                     /locus_tag="QEL58_001764"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease"
                     /protein_id="HDS1676242.1"
                     /translation="MRNPRLLITAIALLLLGLVANHFMQRAPAPQFAPDLQGAPAAQA
                     PATPAARADGGLPAFLPAEARQTIALIQRGGPFPHRQDGSTFGNREQQLPQRARGYYR
                     EYTVDTPGARTRGTRRIVTGGDPPEAWYYTDDHYESFRSFTVPAQGAQ"
     gene            1346..1759
                     /locus_tag="QEL58_001765"
     CDS             1346..1759
                     /locus_tag="QEL58_001765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="barstar family protein"
                     /protein_id="HDS1676243.1"
                     /translation="MSHDDFGLGLHDINNAGVYAIDSDDIDALAAAMRDAGLKVIRID
                     LEGVADKRTLLARLAAQLDFPAGFGGNWDALSDNLRDLQWLPANGYALFLADVDALRA
                     ATQKDFDTLLEVMDETSRDWVGRDVPFWVFLSQSA"
     gene            complement(1900..3666)
                     /locus_tag="QEL58_001766"
     CDS             complement(1900..3666)
                     /locus_tag="QEL58_001766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676244.1"
                     /translation="MPLTRAEQLIDLLLARQQPGAVLEKTTRLPYGWALWLRSLGPLP
                     RPLHAGEIIAVLLPRPLPGPPGQSPRLSPWQALRRLFWQDWDAAPRDQRWMRWTSALA
                     SALLHLLFFVLLLWVAVIRTTAPEEEGAEGERVQVEFVGRATQEGGGDQPGAEAAAAA
                     PAGQVAAGREAGAATAPQPRPAAASTPAPMPAPAATASVPAPPAEAEPAPVAAPPPSP
                     VQATEVAEASTDFVVPPVSVPRTEVSIVPRDTTPTVRERSVQPLQAPPVPTPLHAPAV
                     AVRTPQLRDIQVQEREVSTVDAPVAPQPLRTADVQVRLPQQDLQVREREVQAVVDPQV
                     RMAAVAGREPTVHAPAGRDVQVREREVASAPAAAPSPSTGSAPAATAAPAASSSAAQA
                     SSTTARTSASSTAPAQAGARPAPDPGNWATPAKGDDWGASSRNRDGASSGARQASTSG
                     KGSGLFNADGSVRVPGQEGDGHAERGAPGGANDGWTKERIAQSGTWLKRPPYDYTPTS
                     FDKYWVPQESLLAEWVRKGIKSMEIPLPGTGTKISCVISILQAGGGCGLTNPNMQDQP
                     AVARPPPDIPFKKELQEDNGSR"
     gene            complement(3677..4276)
                     /locus_tag="QEL58_001767"
     CDS             complement(3677..4276)
                     /locus_tag="QEL58_001767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NfuA family Fe-S biogenesis protein"
                     /protein_id="HDS1676245.1"
                     /translation="MIQISDTAQTHFRKLIEREGVPGMGVRLSAVDPGTPRADARLEF
                     AEPTDLLGDEWAVDCDGFTLYVDASSVGWLDGAEIDIVAGTAGAQQLTIKAPRIKGEA
                     PGDAASLVERVHWVVENEINPQLASHGGKVAVQEVSADGVVLLRFGGGCQGCGMADVT
                     LKQGIEKTLMGRVPGVTAVRDATDHDSGHAPYIPRGNAA"
     gene            4367..4717
                     /locus_tag="QEL58_001768"
     CDS             4367..4717
                     /locus_tag="QEL58_001768"
                     /EC_number="4.2.1.96"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005417612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4a-hydroxytetrahydrobiopterin dehydratase"
                     /protein_id="HDS1676246.1"
                     /translation="MADLIPLAQARCVPRKGSDHKLGEARLAELLPQVPGWELSEGGQ
                     ALSRTFRFKDYYATMAFVNALAWIAHREDHHPDLGVHYDRAVVRFSTHDVGGLSENDF
                     ICAAKTSALTEQLP"
     gene            4714..5130
                     /locus_tag="QEL58_001769"
     CDS             4714..5130
                     /locus_tag="QEL58_001769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HDS1676247.1"
                     /translation="MNVRLLSLSLFAATGLAGCGASEPPAPPPPPPTEVAAVKTPPPQ
                     YPLELACMGVGGTSTFKVTIGTDGKPSEVALLTGAGNPQLDELAKAAVQGWQFNAATR
                     NGQPVPATIQVPVSFNPPQPKPDQCFAIEERLRRGG"
     gene            5229..6038
                     /gene="zupT"
                     /locus_tag="QEL58_001770"
     CDS             5229..6038
                     /gene="zupT"
                     /locus_tag="QEL58_001770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006456115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc transporter ZupT"
                     /protein_id="HDS1676248.1"
                     /translation="MLQIPPENVWIALAVTLAAGLATAIGSLLVLFSRRPNPRLLAFG
                     LAFAGGAMVYVSLSEILNKSIASFALAYGERTGFTYGTLAFLLGVIVIVLIDHFIPNP
                     HDSLDKQDPAFRENSREYLKRVALLTSIAITAHNFPEGLATFFATLESPSVGMPLAFA
                     IAIHNIPEGIAIAVPVYFATQNKFYAFSASLLSGLAEPVGAALGYWLLSGSLSHATFG
                     WVFGLIAGVMVFLALDELLPAAKRYAKGHETVYGLVAGMGTLAISLVLFKW"
     gene            complement(6152..7126)
                     /locus_tag="QEL58_001771"
     CDS             complement(6152..7126)
                     /locus_tag="QEL58_001771"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012511609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HDS1676249.1"
                     /translation="MTAQDPTKPAGDKPSVRMITVPADRAGQRLDNFLLGQLKGAPRS
                     LVYKLVRSGQVRVNGGRAKAERKLEAGDEVRVPPVRLTEEGDKAGPPEAFMRRLEQAI
                     VFEDARLLALNKPTGVASHGGSGISFGAIETLRALRPGQTLELVHRLDRDTSGLLIVA
                     KKRSALSELQALLREDHGAGIRKRYLTLLTGRMPDGVMTVDAPLHVGLRQGGERHVQV
                     NAIGKESISHFRVLERRGGHSYCEVRIETGRTHQIRVHAQHLGHPVAGDDKYGDPVVN
                     KRLREQIGLKRLFLHAASLEFALDDGKSPYVLNAPLADELVEALDRLK"
     gene            7535..10819
                     /gene="rne"
                     /locus_tag="QEL58_001772"
     CDS             7535..10819
                     /gene="rne"
                     /locus_tag="QEL58_001772"
                     /EC_number="3.1.26.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005413973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease E"
                     /protein_id="HDS1676250.1"
                     /translation="MKRMLINATQAEELRVAIVDGQSLYDIDIEQPSKEQKKSNIYKG
                     RIFRIEPSLEAAFVEYGGGRHGFLPLKEISRDYFQAGVDHNKAGIRELLREGQEIVVQ
                     VDKEERGNKGAALTTFISLAGRYMVLMPNSPSAGGVSRRIEGEDRAALKDALDKLNIP
                     DDMGVIIRTAGVGRDAEELQWDLDYLLNVWRAIAEAALSKPAPFLIYQESRLIVRALR
                     DYLRADIGEILVDTEEMYEHAREFMQQVMPQTLRKLKHYKDDIPLFNRFQIESQIEGA
                     YERNVRLPSGGSIVVDQTEALTAVDVNSSRATKGSDIEDTAFQTNLEAAEEVARQLRL
                     RDLGGLVVIDFIDMASNKHQREVENRLANALKYDRARVQVGRISRFGLLEMSRQRLRP
                     SLGESSQIVCPRCDGHGRMRSVESLSLSIIRVAEEHAMKENTGQVLVQAPVEIANYLL
                     NEKRSALREIEQRHEAPIVIVADEQLHTPHYTVTRLRENELGEESNKPSYQRGTPRKL
                     PVHALTKGQLNIPPPAVTQVKHTSPAPVREEVEPAAAAPAPVVAAPVAQAPSGGVIGW
                     LKRVFGGEPAPAPAPAAPAARQQQDGGRKDRNKDRNKDRKDRRDDNRGNGGNGNAQQQ
                     KDGGNRKDRGEQRKDGRNGNNGNAQQQPQQGKQKEPQQKDGQQPQQQNKPRNEQQGQN
                     PQQPKLKQPKQPRPQQDGDKPAEKPQRNAAEVSAETVTAAAAVAATAVAANVVTAQEA
                     TAPVAPVAPAASAPAEAAAPVDATSSTGNEAEVVAVTADEAATDANGDQAGEGATRRR
                     RGRRGGRRRRRGGAENAAGSDALGDDQDDGDEGDDADGAEPNVDSAAGIVPVATSQPV
                     RSQPEFDFDDEVEPAAADAAKPARAAAAVVAAPVAVVSSAVVEAAAPVVAEAKAPVEA
                     TVKAEPAPSPVQTSMLDAIDAATPVQPVAVTAPVAEATQAVVEAAPVVEAAPAVETKP
                     VVAEAAPVVESKPEVVDASPVVEAQPVAVEAAPVVETAPVVDAAVAIEATPVVETAPI
                     AEQPVAPVAVEAAAVEAAAPVAEAVVAPSIDPVADGHTDAAAQAAEAKADEEDEETAK
                     RTPPAH"
     gene            complement(10990..11877)
                     /locus_tag="QEL58_001773"
     CDS             complement(10990..11877)
                     /locus_tag="QEL58_001773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease/exonuclease/phosphatase family
                     protein"
                     /protein_id="HDS1676251.1"
                     /translation="MKLQRAKVRTSVRALGLAIAMALPGMVMAVEPAATAASAEVANA
                     PGMSMVTFNLHHDREDWPSRRRTILAELKRLQPDAVALQEVIQRRNVRNQAQWLASQL
                     GYTYVFVSTDPVGAPKRYGNALLTRRPILARGDHLLQPLDDYRTVAHLRIDVDGTPVN
                     VYATHLNERSDERGQGIRRSQVEDLLRFISDTSAGAPVVIAGDFNALVDAGDLSALRS
                     RYGDSYGSVHVNTDLAGVSTLNRHYYQAPSRIDHIFFQQDEMVAREAKLLFDQPDDSG
                     RWASDHYGVWTRLQFAPAR"
     gene            complement(11880..15047)
                     /locus_tag="QEL58_001774"
     CDS             complement(11880..15047)
                     /locus_tag="QEL58_001774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010486732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="discoidin domain-containing protein"
                     /protein_id="HDS1676252.1"
                     /translation="MKRAIAVGLGLLWTSLAIAAPPALPAPKVLDDFDDIGAWKLVLS
                     DQVSGSLRPVSGAGGGRALCLDYDFHKVSGYVGIRRALNIEYPVNYRFGFQLRGDSPG
                     NDLQFKLIDASGDNVWWVNRPGYSFPKAWTPVEYRRRQIDKAWGPSPEKEMARSAAVE
                     FTIYSKVGGRGTVCFDRLTLQGLPPQDDSALVPSVIADTATALQDRMIDGKSDTFWIS
                     GGVKQQTISLDLHKSREIGGAVIDWLPDLEARRYTVRTSEDGRDWRTVREVTSGAGGR
                     DWLALPDTDARYVRFDLQDGPNWRYGIRDIMLKPLAFAATPNAFLSSVAADLPRGALP
                     RAYVGEQPYWTLLGLDGGQEQALISEDGALEPAKGSFSIEPFIRLDGKLLDWSKVAIT
                     QSLQDHYLPIANVDWVHEKVGLAVTSFVQGTPERSQLIGRYRLSNPDKVAHEYTLALA
                     IRPWQVNPPTQFLNTVGGFSRIDALDVGEQLVRVNGEPRIYPLQVPDARFASTFDGKL
                     DAMHLASGKYPATTAVKDSTGMASGALMYTIKLEPGQSREVAVVLPQTGGWAPRALDV
                     AKAQAQVAEQWRQKLGVVSLQVPAAGQALVDTLRTAVAHMLISRVGPRLQPGTRSYAR
                     SWIRDGAMISEGLLRMGRSDAVRDYINWYAPYQFENGKVPCCVDARGSDPVPENDSHG
                     ELIYSIAEYGRYTGDSTFVELMWPHVQGAYTYMEQLRASERTEENRARNPAFYGMMPA
                     SISHEGYSAKPMHSYWDNFWALRGYKDAALLATQLGKVEAMQIAESRDQFRDDLQASL
                     LSAMQQHNIDYLPGSAELGDFDATSTTIALAPGGEQGRLPQQALEATFERYWKEFVAR
                     RDGKREWKDYTPYEWRNVAAFVRLGWRDRAWQATGFFFNDRAPQAWNQWAEVVSRTPR
                     KPFFVGDLPHAWVASDFVRSALDMFAYNRDMDDALVLAAGVPAAWLQGEGIAVQGLRT
                     PQGQLNYRLQRSDKQLVLELQPGLVPPVGGVVLPWPYAGDPGDATVNGEAVEWINKEL
                     HVHQLPARVEIDVPSAVRRAERKGQ"
     gene            complement(15044..15880)
                     /locus_tag="QEL58_001775"
     CDS             complement(15044..15880)
                     /locus_tag="QEL58_001775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017357393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HDS1676253.1"
                     /translation="MSREIGQSRWYPWMINGALLVLALVSLAPLLWMVSVSFMPQGEA
                     SHFPPPLLPSSVTTHNYHELFARTGMGGNFANSLLVSLGITIGSLLLNTMAGYAFAKL
                     NFVGRERLFQVLMAALVIPAQVAMLPLFLLMKQLGLVNSFGGVIVPALASVFGIFLVR
                     QYARSIPDELLEAARIDGAGELRIFFQIVLPMLKPVLVTLAIFTFMGAWNDFMWPLIV
                     LTDQEHYTLPVALATLSREHIMDVEMMMAGAVVTVVPVLALFLVLQRYYIQGLLLGSV
                     KG"
     gene            complement(15877..16758)
                     /locus_tag="QEL58_001776"
     CDS             complement(15877..16758)
                     /locus_tag="QEL58_001776"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003489669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HDS1676254.1"
                     /translation="MKRTSLAGWIFAGPSLIVLGVFFGLPVASALALSVTDFDLYALA
                     DSSNLRFVGLGNYIDLLQTPMFWKSLWNTTYFVLIGVPLSIGVSLGAAMLLNAPAARF
                     KALFRTALFAPVVTTLVAVAVIWRYLFHTSYGLVNYGLGHLGISPIDWLGDPNWAMPT
                     IMLFAVWKNFGYNMVIFLAGLQAIPHDLYEAARIDGASRWKQFLHITLPMLGPVLLVV
                     GVITVSGYFQLFAEPYVMTRGDPLQSTVSVLYFMFEEGFKWWNLGRASAVAFLLFLII
                     LAVTTVMLRFGRKRQLV"
     gene            complement(16755..18095)
                     /locus_tag="QEL58_001777"
     CDS             complement(16755..18095)
                     /locus_tag="QEL58_001777"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter substrate-binding protein"
                     /protein_id="HDS1676255.1"
                     /translation="MPNWIDRLRRWALPALAALAVAGCARTEPGTTTVRFWAMGREAE
                     VVSELIHEFEAENPGIKVDVQNIPWTAAHEKLLTAFAADGLPDVCQLGNTWVPEFAEL
                     DALTPLQPFVQRSSVVDPKDYFQGIWDTNVIHGELVGVPWYVDTRLIYYRKDLLAKAG
                     YDHPPRTWQEWDEQMAAIKKMQGPNRYAVLMPINEFEQQLSLALQQPDPLLRDDDTRG
                     NFASPGFRRTLAFYANMFEQGWAPKMSETQISNVWDEFFRGFNVFYISGPWNIREFKK
                     LQPKELEGQWGTAPLPGPDGPGAGIAGGTSLVIFRKSQQKEASWKLIEFLSRPEIQAR
                     FHSIIGDLPPRRSTWNAPSLANDPLAVAFRDQLERVKPTPKVLEWERIVQEMRIVTEK
                     VVRGGLPQDKAVEELDQRVDKVLAKRRWMHEQQRLQQRAPSPQSSSAVAAGSAQ"
     gene            complement(18100..19704)
                     /locus_tag="QEL58_001778"
     CDS             complement(18100..19704)
                     /locus_tag="QEL58_001778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005413978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676256.1"
                     /translation="MQARHLLSAAALSLAVAACQPAQQEPAKPRPPVILIEADAPPRP
                     MKPELPPLFDDIERRTFQFFWDTTNEINGLTPDRYPSRPFASIASVGFALTAYPIGIE
                     NGWVSRNQAIDRTLTTLKFFRDVPMGPQRTGKAGYKGFYYHFLDMQEGRRYDSWVELS
                     SVDTALLMMGVLFAQSYYDGDDPREKEIRQIADTLYRKIDWPWLQQRAPLISMGWFPE
                     SGFIDHDWMGYNEAMMVYILALGSPTHPVSLDAWTVWTRTYDNDWGVYQGQEYLSFGP
                     LFGHQYSHVWIDFRDIQDAYMRERGSTYFLNSRSAALAQREYAIANPMQWKDYGENVW
                     GLTASDGPQNTTQEYRGEQRQFRHYSSRGAGLRENFDDGTIAPTAAIASVVFAPEQVI
                     PATLEMHKRYGDYIYSSYGFLDSFNPSFNYDIPIKTGRLVPDRGWVASDYIAIDQGPI
                     LTMIANYRNDFVWEVMKKNPYIRKGLERAGFSGGWLAPEGSFQPLELQKDEKAAAARA
                     VGIAESRAAAAQEQKNNANRTTGQGK"
BASE COUNT         3312 a         6801 c         6532 g         3193 t
ORIGIN      
        1 gaatcctgca acaaaaaagg ccggggtctc ccccggcctt ttccgttcat cccgtcaccg
       61 cgatcaggcg atcgcttcct ggtaacggcg ctcgacttcg ttccagtcga tcacgttgaa
      121 gaacgcgccg atgtattccg gacggcggtt ctggtacttc aggtagtacg cgtgttccca
      181 cacgtccagg ccgaggatgg gggtgttgcc ttccatcagc gggctgtcct ggttgccggt
      241 gctctcgaca acgaccttct tgtccggggt gacgctcagc catgcccagc cgctgccgaa
      301 acgggtcagc gcggccttgg tgaaggcatc cttgaacttg tcgaagccac ccaggtcctt
      361 gtcgatggcc ttggccacgt cgcccaccgg gttgccgccg gcattcggcg ccatcacggt
      421 ccagaacagc gagtggttgg catggccacc cccgttgttg cgcaccgggc cctgcaggtt
      481 ctccggcagc gacttcagct tcttcaccag ctcttcgacc ggcaggtcag cgtactcggt
      541 gccttccagc gccgcgttga cgttgttgat gtaggtctgg tgatgcttgg tgtgatggat
      601 ttccatcgtc gccgcatcga tatgcggttc cagcgcgtcg taggcgtagg acagcttggg
      661 cagggtgtag gccatgatgc atctcctgat tgcgagggca cccgacggtg tcgggcggtg
      721 cgcggtgaat gatggggaca gaccgcaaga ttaccaaggg ggatgtaaag gaaattgcgt
      781 cctgccggtg agcatgccgg caattgttac gcagcggtga cgcgcgcgct cctcatgccc
      841 cgtgcagcgc acaggcgtta cagtgcgtgc ctcgccctcg cctgcccgtg cccatgcgca
      901 acccccggct gctgatcacc gccatcgccc tgctgctgct cggcctggtc gccaaccact
      961 tcatgcagcg tgcgccagcg ccgcagttcg cgccggacct gcagggcgcg cctgccgcgc
     1021 aggccccggc cacgccggca gcccgcgccg atggcgggtt gcccgcgttc ctgcccgccg
     1081 aggcgcgcca gaccatcgcg ctgatacagc gcggtggccc gttcccgcac cgccaggacg
     1141 gcagcacctt cggcaaccgc gagcagcagt tgccgcagcg cgcgcgcggc tactaccgcg
     1201 agtacaccgt cgacactccc ggcgcacgca cccgtggcac gcgccgcatc gtcaccggtg
     1261 gcgacccgcc ggaggcgtgg tactacaccg acgaccacta tgaatcgttc cgcagcttca
     1321 ccgtaccggc ccagggagcg cagtgatgag ccacgatgat ttcggcctcg gcctgcatga
     1381 catcaacaat gccggcgtct acgccatcga cagcgacgac atcgacgcgc tggccgcggc
     1441 gatgcgcgat gccggcctga aggtgatccg catcgatctg gaaggcgtgg ccgacaagcg
     1501 caccctgctg gcacgactgg ccgcgcagct ggatttcccg gcagggttcg gcggcaactg
     1561 ggatgcgttg tcggacaacc tgcgcgacct gcaatggctg ccggccaacg gctatgcact
     1621 gttcctggcc gacgtcgatg cactgcgtgc cgccacgcag aaggacttcg acaccctgct
     1681 ggaggtgatg gacgaaacca gccgcgactg ggtcggccgt gacgtgccgt tctgggtgtt
     1741 cctgtcgcag agcgcgtgag gtcactgccc tggtggatgc cgaccttggt cggcatgcgt
     1801 gctccggtag atgccgacct tggtcggcgt ttctgtgcca accaaggttg gcacctacca
     1861 aagcgcgagc cggccagcgt gcggggcgcg gccccctgcc tagcggctcc cgttatcttc
     1921 ctgcaactct ttcttgaacg ggatgtccgg cggcggacgc gccaccgctg gctggtcctg
     1981 catgttcggg ttggtcaggc cacagccacc accagcctgc aggatcgaga tcacgcagga
     2041 gatcttcgtg ccggtgcccg gcaacggaat ctccatcgac ttgatgccct tgcgcaccca
     2101 ctcggccagc agcgactcct gcggcaccca gtacttgtcg aacgaggtag gcgtgtagtc
     2161 gtacggcggc cgcttcaacc aggtgccgga ctgagcgatg cgctccttgg tccagccatc
     2221 gttggcacca cccggtgcgc cccgttcggc gtgcccgtcg ccctcctgcc ccggcacccg
     2281 cacgctgcca tcggcattga acagaccact gcccttgccg gaagtactgg cctgccgcgc
     2341 gccactgctg gcaccgtcgc ggttgcggct ggatgcaccc cagtcatcgc ccttggcagg
     2401 cgtggcccag ttgcccggat cgggcgccgg gcgcgcgccg gcctgggccg gtgcggtact
     2461 ggatgccgac gtgcgcgccg tcgtgctgct ggcctgcgcc gcgctgctgc tggccgcagg
     2521 cgctgcggtt gccgcggggg cactgccagt ggaaggtgat ggcgccgccg ctggtgccga
     2581 ggcgacttcg cgttcgcgca cctgcacgtc acggcccgcc ggcgcatgta cggtcggctc
     2641 acggccggcc acggccgcca tgcgcacctg cggatcgacc acggcctgca cctcgcgttc
     2701 gcgcacctgc agatcctgtt gcggaaggcg tacctgcaca tccgcggtgc gcagcggctg
     2761 cggcgccacc ggggcgtcga ccgtactgac ttcgcgctcc tgtacctgga tgtcacgcaa
     2821 ctgcggcgtg cgcaccgcaa cggccggtgc atgcagcggc gtcggcacag ggggcgcctg
     2881 caacggctgc acgctgcgct cgcgcacggt gggtgtggtg tcgcgcggca cgatgctgac
     2941 ttcggtgcgc ggcacgctga ccggcggcac cacgaagtcg gtgctggcct cggccacctc
     3001 ggtggcctgc accggcgaag gcggcggtgc cgcgaccggc gcgggttcgg cttcagccgg
     3061 cggcgcaggc acgctggcgg tcgctgccgg cgccggcatg ggcgcaggcg tcgacgctgc
     3121 ggcaggacgc ggttgcggtg cggtggcggc tcccgcctcg cggccggccg ccacctgccc
     3181 agccggcgcg gcggcagcgg cttcggcgcc cggctggtcg ccaccgcctt cctgggtagc
     3241 gcggccgacg aattccacct gcacgcgctc gccttcagcg ccctcttcct ccggcgccgt
     3301 ggtgcggatc accgccaccc acagcagcag cacgaagaac agcagatgca acagcgcgct
     3361 ggccagtgcc gaggtccagc gcatccagcg ctgatcgcgc ggtgcggcat cccagtcctg
     3421 ccagaacaac cggcgcagcg cctgccacgg ggacaaacgc ggtgattgcc cgggtggccc
     3481 gggcaacgga cgcggcaaca gcaccgcgat gatctcgccg gcatgcagcg gccgcggcaa
     3541 tggaccgagc gagcgcagcc acagcgccca gccatagggc aggcgcgtgg tcttctcgag
     3601 gacggccccg ggctgctggc gcgccagcag caggtcgatg agctgctcgg cccgggtcag
     3661 aggcacgcgt cagcgatcag gcggcgttgc cgcgagggat gtacggcgcg tggccactgt
     3721 cgtggtcggt cgcatcacgt acagcggtca cgcccggcac gcggcccatc agggtcttct
     3781 cgatgccctg cttgagggtc acgtcggcca tgccgcagcc ctggcagcca ccaccgaagc
     3841 gcagcagcac cacgccgtcg gccgagactt cctgcacggc caccttgccg ccatgcgagg
     3901 ccagctgcgg attgatttcg ttctcgacca cccaatgcac gcgctcgacc agcgaggcgg
     3961 catcgccggg cgcttcgccc ttgatgcgcg gcgccttgat agtcagctgc tgggcaccgg
     4021 cggtgccggc gacgatgtcg atctcggcgc catcgagcca gccgacgctg ctggcatcga
     4081 catagagggt gaaaccatcg cagtccaccg cccactcgtc gccgagcaga tcggtcggtt
     4141 cggcgaattc cagccgggca tcggcgcgcg gggtaccggg atcgaccgca ctgaggcgca
     4201 cgcccatgcc gggcacgccc tcgcgttcga tcaacttgcg gaaatgggtc tgggcagtgt
     4261 cggagatctg gatcatcagg ctattctagc caagtaagcg tcagccgctc attcggttta
     4321 tacaccgtcc ggcgcattgt tcagtcaaca cgaggtggag attcccatgg ccgacctgat
     4381 tccactggcc caggcccgtt gcgtgccgcg caaaggcagc gaccacaagc ttggcgaagc
     4441 ccgcctggcc gaactgctgc cgcaggttcc cggctgggag ctgagcgagg gcggccaggc
     4501 cctgtcgcgc accttccgct tcaaggatta ctacgccacc atggccttcg tgaacgcgct
     4561 ggcctggatc gcccaccgcg aggaccacca tccggacctg ggcgtgcact acgaccgcgc
     4621 ggtcgtgcgc ttctccaccc acgatgtggg cggcctgagc gagaacgact tcatctgcgc
     4681 ggcaaagact tcggccctga cggagcaact gccatgaacg tacgcctgct gagcctgtcc
     4741 ctgttcgctg cgaccggcct ggccggctgt ggcgcgtccg aaccgccggc accgcctccg
     4801 ccgccgccga ccgaagtggc cgcggtgaag acgccgccgc cgcagtaccc gctggaactg
     4861 gcctgcatgg gcgtgggcgg caccagcacc ttcaaggtca ccatcggtac cgacggcaag
     4921 ccgagcgagg tcgccctgct gaccggcgcc ggcaacccgc agctggacga gctggccaag
     4981 gccgccgtgc agggctggca gttcaacgcc gccacccgca acggccagcc ggtgccggcc
     5041 accatccagg tgccggtcag cttcaacccg ccgcagccga agccggacca gtgcttcgcc
     5101 atcgaagaac gcctgcgccg cggcggctga tcgcgcgcac cccgacgagg ccagccgacg
     5161 cccgcctcgc cctcgccgcc ccggccttgc ccggggcggt tgtctgttga ccaggatcgc
     5221 gtcggtacat gctgcagatt ccccccgaaa acgtctggat cgcgctcgcg gtcaccctcg
     5281 cggccggtct ggccaccgct atcggcagcc tgctggtgct gttctcgcgc cggcccaatc
     5341 cgcgcctgct ggccttcggg ctggccttcg ccggcggcgc catggtctac gtgtcgctgt
     5401 cggagatcct caacaagtcc attgcgtcct tcgcgctggc ctatggcgag cgcaccggct
     5461 tcacctacgg caccctggcg ttcctgctgg gcgtgatcgt gatcgtgctg atcgaccact
     5521 tcattcccaa cccgcatgac agcctggaca agcaggaccc ggcattccgc gagaacagcc
     5581 gcgagtacct gaagcgggtt gccctgctga cctcgatcgc catcaccgcg cacaacttcc
     5641 cggaagggct ggcaacgttc ttcgcgaccc tggagagccc gtcggtaggc atgccgctgg
     5701 ccttcgccat cgccatccac aacatcccag agggcatcgc gatcgcggta ccggtgtact
     5761 tcgccaccca gaacaagttc tacgcgttca gcgccagtct gctgtcgggc ctggccgagc
     5821 cggtgggcgc ggcgctgggc tactggctgc tgtccggatc gctgtcgcac gccaccttcg
     5881 gctgggtgtt cgggctgatt gccggcgtga tggtgttcct ggcgctggac gagctgctgc
     5941 cggcagccaa gcgctatgcc aagggccacg aaaccgtgta cgggttggtg gccggcatgg
     6001 gcacgctggc gatcagcctg gtgctgttca agtggtgagc aattccaggc ccgccccgta
     6061 gagtcgagct tactcgactg acattcctcg accgaacagc agtcgagcaa gctcgactct
     6121 acaaggggat acggcgcgct gcctgtcctg cctacttcag ccgatccagc gcctcgacca
     6181 gctcatcggc cagcggcgcg ttcagcacgt acgggctctt gccgtcgtcc agtgcgaact
     6241 ccagcgacgc cgcatgcagg aacaggcgct tcagcccgat ctgctcacga agccgcttgt
     6301 tgacgaccgg atcgccgtac ttgtcgtcac cggccaccgg gtgccccagg tgctgggcat
     6361 gcacgcggat ctggtgcgtg cggccggtct cgatgcggac ctcgcagtac gaatgcccgc
     6421 cgcgacgctc gagcacgcgg aagtggctga tcgactcctt gccgatcgcg ttgacctgca
     6481 catggcgctc gccgccctgg cgcaggccca cgtgcagcgg cgcatcgacc gtcatcacgc
     6541 cgtcgggcat gcgcccggtc agcagggtca ggtagcgctt gcggatgccg gcgccgtggt
     6601 cttcacgcag cagcgcctgc agctcgctca gcgccgagcg cttcttggcc acgatcagca
     6661 ggcccgatgt gtcgcgatcc aaccggtgga ccagctccag ggtctgcccc gggcgcagcg
     6721 cacgcagggt ctcgatggcg ccgaaactga tgccgctgcc gccgtggctg gccacgccgg
     6781 tgggcttgtt cagggccagc aggcgggcgt cctcgaagac gatggcctgc tccagccgac
     6841 gcatgaacgc ctccggcgga ccggccttgt ctccctcttc ggtgagacga accggtggca
     6901 cacgcacctc gtctccggcc tccagcttgc gttcggcctt ggcccggccg ccgttcaccc
     6961 gcacctggcc gctgcgcacc agcttgtaga ccaggctgcg cggggcaccc ttcagctggc
     7021 cgagcaggaa gttgtccagg cgctggccgg cgcggtcggc gggaacggtg atcatgcgca
     7081 cggaaggctt gtcgccagcg ggcttggtgg ggtcttgggc ggtcatcagg ctgtttattc
     7141 tgttacactc ggggggcgag ataagggatt gatttcgttg gaagttactc agggccagaa
     7201 gcccagcttc cgacgaatcc ggcacagtgc gcgaccaccg cccgcggggc ggccatgtta
     7261 gcggctcacc ggccttcccg gccatcgccg gatgcctgac acgcaaccgt gctgaacatg
     7321 tcccgcgtgg cgctccagcc tggctgacag ctgcctgcgg ccctgcaaca cccaaaaacc
     7381 cataagagtg aagcgctccc gcggcctgcc gtggtgtcgt agcgctggaa acccaagccg
     7441 ccctccccgc gcttgcgcga atgggcggcg agccgtgtcc agaggcgaaa ccccatggcg
     7501 ttccgcgcgg tagccgcttg cgaggaacgc aacaatgaag cgaatgctga tcaacgccac
     7561 gcaggctgaa gagctgcgtg ttgccatcgt ggatggccag tcgttgtatg acatcgacat
     7621 cgaacagccg tcgaaggaac agaagaagtc caacatctac aagggccgga tcttccgcat
     7681 cgagccctcg ctggaagcgg ccttcgtcga atacggtggt ggccgccatg gcttcctgcc
     7741 gctgaaggaa atctcccgcg actacttcca ggccggtgtc gaccacaaca aggccggcat
     7801 ccgtgagctg ctgcgggaag gccaggaaat cgtcgtccag gtggacaagg aagagcgcgg
     7861 caacaagggc gccgccctga ccacgttcat ctcgctggcc ggccgctaca tggtgctgat
     7921 gccgaactcg ccgagcgcgg gcggtgtctc ccgtcgcatc gaaggcgaag accgggccgc
     7981 gctgaaggac gccctggaca agctgaacat ccccgacgac atgggcgtga tcatccgcac
     8041 cgccggcgtc ggccgcgatg ccgaagagct gcagtgggat ctggactacc tgctcaacgt
     8101 ctggcgtgcc atcgccgagg ccgcgctgag caagccggcc ccgttcctga tctaccagga
     8161 atcgcgcctg atcgtgcgcg ccctgcgtga ctacctgcgc gccgacatcg gcgagatcct
     8221 ggtcgacacc gaggagatgt acgagcacgc ccgcgagttc atgcagcagg tgatgccgca
     8281 gaccctgcgc aagctcaagc actacaagga cgacatcccg ctgttcaacc gcttccagat
     8341 cgagtcgcag atcgaaggcg cctacgagcg caacgtgcgc ctgccgtcgg gtggctcgat
     8401 cgtggtcgac cagaccgaag cgctgaccgc ggtcgacgtc aactcctcgc gcgccaccaa
     8461 gggcagcgac atcgaggaca ccgcgttcca gaccaacctg gaagcggccg aggaagtggc
     8521 ccgccagctg cgcctgcgcg acctcggcgg cctggtggta attgacttca tcgacatggc
     8581 ctccaacaag caccagcgcg aggtcgagaa ccgcctggcc aacgcgctga agtacgaccg
     8641 cgcgcgcgtg caggtcggcc gcatctcgcg cttcggcctg ctggaaatga gccgccagcg
     8701 cctgcgtccg agcctgggcg agtccagcca gatcgtctgc ccgcgttgcg acggccacgg
     8761 ccgcatgcgc agcgtcgagt cgctgtcgct gtcgatcatc cgcgtcgccg aagagcatgc
     8821 gatgaaggag aacaccgggc aggtgctggt ccaggccccg gtggagatcg ccaattacct
     8881 gctgaacgaa aagcgcagcg ccctgcgcga gatcgagcag cgccacgaag cgccgatcgt
     8941 gatcgtcgcc gacgagcagc tgcacacccc gcactacacc gtgacccgcc tgcgcgagaa
     9001 cgagctgggc gaagagagca acaagcccag ctaccagcgc ggcaccccgc gcaagctgcc
     9061 ggtgcacgcc ctgaccaagg gccagctgaa catcccgccg ccggcggtga cccaggtcaa
     9121 gcacacctcc cccgccccgg tgcgcgagga agtggagccg gccgcggccg ctccggcccc
     9181 ggtggtggcc gcgccggtgg cgcaggctcc gagcggtggc gtgatcggtt ggctcaagcg
     9241 cgtgttcggt ggcgaaccgg cccccgcacc ggcgccggcg gctccggcgg cgcgccagca
     9301 gcaggacggc ggccgcaagg accgcaacaa ggatcgcaac aaggaccgca aggaccgtcg
     9361 cgacgacaac cgtggcaacg gcggcaacgg caacgcacag cagcagaagg acggcggcaa
     9421 ccgcaaggac cgcggtgagc agcgcaagga cggccgcaac ggtaacaacg gcaatgccca
     9481 gcagcagccg cagcagggca agcagaagga gccgcagcag aaggatggcc agcagccgca
     9541 gcagcagaac aagccgcgca acgagcagca gggccagaac ccgcagcagc cgaagctgaa
     9601 gcagccgaag cagccgcgcc cgcagcagga cggtgacaag ccggccgaga agccgcagcg
     9661 caacgccgcc gaggtctcgg ccgaaaccgt gactgcggct gcagccgtgg ctgccacggc
     9721 tgtcgccgcc aacgtggtga ccgcccagga agccacggcg ccagtggctc cggtggcccc
     9781 ggccgcttcc gctccggctg aagccgccgc accggtcgat gccaccagca gcaccggcaa
     9841 cgaggccgaa gtggttgccg tgaccgccga tgaggctgca accgacgcca acggtgacca
     9901 ggccggcgaa ggcgcgaccc gccgtcgtcg cggccgtcgc ggtggccgtc gccgtcgtcg
     9961 cggtggcgcc gagaacgctg ccggcagcga cgcactgggc gatgaccagg acgatggtga
    10021 cgaaggcgat gatgccgatg gcgccgagcc gaacgtcgac agcgctgccg gcattgtccc
    10081 ggtcgccact tcgcagccgg tccgttcgca gccggaattc gatttcgatg atgaagtcga
    10141 gcccgccgct gccgacgccg caaagccggc tcgcgccgct gctgccgttg tcgccgcgcc
    10201 tgtcgcggtg gtgagcagcg ccgtggtcga agccgctgcg ccggtcgtgg ccgaagccaa
    10261 ggctccggtc gaagctacgg tcaaggccga accggcaccg tcgccggtac agaccagcat
    10321 gctcgatgcc atcgacgctg cgactccggt gcagccggtg gccgttacgg ctccggtggc
    10381 ggaagcaacg caggcggtgg tcgaggctgc cccggtcgtt gaagctgccc cggctgttga
    10441 gacgaagccg gtcgtggccg aggcagcgcc ggtggtggaa tcgaagccgg aggttgttga
    10501 cgcttccccg gtggtggaag cccagccggt ggccgttgag gccgccccgg tggtggaaac
    10561 cgcgccggtg gtggacgccg ctgtggcgat tgaagccacg ccggtcgtcg agaccgcgcc
    10621 gatcgccgaa cagccggtcg ctccggtggc ggtcgaggcc gctgcggtgg aagccgctgc
    10681 cccggtcgcc gaggcagtgg tggcaccgtc gattgacccg gttgccgatg gtcacaccga
    10741 cgctgcggcc caggctgccg aagccaaggc tgacgaagaa gacgaagaga ccgccaagcg
    10801 cacgccgccg gcgcactgat cgctctttga tcacgtgaaa gcgaaacggc ggggatcgat
    10861 gatccccgcc gtttttgttt gtgcgtcggg cgcgtgcagc gctctggtag aggccaacct
    10921 tggttggcac cgttgttgga gcgaacgcgg gcacgtccgt gccaaccaag gttggcacct
    10981 accgggacat cagcgcgccg gcgcgaactg caaccgggtc cacacgccgt aatgatccga
    11041 ggcccagcga ccgctgtcgt cgggctggtc gaacagcagc ttcgcctcgc gcgcgaccat
    11101 ctcgtcctgc tggaagaaga tgtggtcgat ccgcgagggc gcctggtaat agtgccggtt
    11161 caaggtgctg accccggcca ggtccgtatt gacgtgcacg ctgccatagc tgtcaccgta
    11221 acggctgcgc agcgcactca ggtcgccggc atccaccagt gcattgaagt cgcccgcgat
    11281 caccaccggc gcaccggccg aggtgtcact gatgaagcgc agcaggtctt ccacctggct
    11341 gcggcggatg ccctggccac gctcgtcgct gcgctcattg aggtgcgtgg cgtagacatt
    11401 caccggcgtt ccatcgacat cgatgcgcag atgggcgacg gtacggtagt catccagcgg
    11461 ctgcagcagg tgatcgccgc gagccaggat cggacggcgg gtcagcagcg cattgccgta
    11521 gcgcttgggt gccccgaccg gatcggtgga cacgaacacg tacgtgtagc cgagttggct
    11581 ggccagccac tgcgcctggt tccgcacgtt gcggcgctgg atcacctcct gcagggcaac
    11641 cgcatccggc tgcaggcgct tgagctcggc caggatggtg cggcgacgac tcggccagtc
    11701 ttcccggtcg tgatgcaggt tgaaggtgac catgctcatg ccgggcgcat tggccacctc
    11761 agccgacgcg gcggtggctg caggctcgac cgccatcacc atgcccggca gtgccattgc
    11821 aatcgccagc cccagggcac gcaccgacgt gcgtaccttc gcccgctgca gcttcatcgt
    11881 tactgtccct tgcgttcggc gcggcgcacc gcgctcggca cgtcgatctc gacccgcgcc
    11941 ggcaactggt gcacgtggag ttccttgttg atccactcga ccgcttcacc gttgacggtg
    12001 gcatcgcccg gatcaccggc atacggccag ggcagcacca cgccgcccac cggcggtacc
    12061 aggcccggct gcagctccag caccagctgc ttgtcactgc gctgcaggcg gtagttcagc
    12121 tggccctgcg gcgtgcgcag gccctgcacg gcgatgccct cgccctgcag ccacgcggcg
    12181 ggcacgccgg cggccagcac cagtgcgtcg tccatgtcgc ggttgtaggc gaacatgtcc
    12241 agcgccgagc gcacgaagtc cgaggcgacc caggcgtgtg gcaggtcacc gacgaagaac
    12301 ggcttgcgcg gcgtgcgtga caccacttcc gcccattggt tccaggcctg cggcgcacgg
    12361 tcattgaaga agaacccggt ggcctgccag gcgcgatcgc gccagcccag gcgcacgaac
    12421 gcggccacgt tgcgccactc gtacggggtg tagtccttcc actcgcgctt gccatcgcgg
    12481 cgggccacga attccttcca gtagcgctcg aaggtcgctt ccagcgcctg ctgcggcagg
    12541 cggccctgct caccgcccgg ggccagcgcg atggtggtcg aggttgcatc gaaatcgccc
    12601 agctcggccg aacccggcag gtaatcgatg ttgtgctgct gcatcgcaga cagcaacgac
    12661 gcctgcaggt catcgcggaa ctggtcgcgc gattcggcaa tctgcatcgc ctcgaccttg
    12721 cccagctggg tcgccagcag cgcagcgtcc ttgtaaccgc gcagtgccca gaagttgtcc
    12781 cagtacgaat gcatcggctt ggccgaatag ccttcgtggc tgatcgaggc cggcatcatg
    12841 ccgtagaagg ccgggttgcg cgcccggttt tcctcggtgc gctcgctggc gcgcagttgt
    12901 tccatgtagg tataggcgcc ctgcacgtgc ggccacatca gttcgacgaa ggtgctgtcg
    12961 ccggtatagc gcccatattc ggcaatgctg tagatcagct caccatggct gtcgttctcc
    13021 ggcaccgggt cgctgccgcg cgcgtcgacg cagcacggca ccttgccgtt ctcgaactgg
    13081 tacggcgcat accagttgat gtagtcgcgc acggcgtcgc tgcggcccat gcgcagcagg
    13141 ccttcggaaa tcatcgcgcc atcgcggatc cagctgcgcg cgtaggaacg cgtacccggc
    13201 tgcaggcgcg gcccaacgcg cgagatcagc atgtgcgcca ctgcggtacg cagggtgtcg
    13261 accagcgcct ggccggccgc cggcacctgc agcgagacca cgcccagctt ctgtcgccac
    13321 tgctcggcca cctgtgcctg ggccttggcc acatccagcg ccctgggcgc ccagccaccg
    13381 gtctgcggca acaccaccgc cacttcgcgg ctctggccgg gctccagctt gatcgtatac
    13441 atcagcgcgc ccgacgccat gccagtgctg tccttcaccg ccgtggtggc cgggtacttg
    13501 ccgctggcca gatgcatcgc atcgagcttg ccgtcgaacg tgctggcaaa gcgcgcgtcc
    13561 ggcacctgca gcgggtagat gcgcggctca ccattgaccc gcaccagctg ttcgccgaca
    13621 tccagcgcat cgatgcggct gaagccgccg acggtgttga ggaactgggt cggcgggttg
    13681 acctgccacg ggcggatcgc cagtgccagg gtgtactcgt gcgcgacctt gtccggattg
    13741 ctcagccgat aacggccgat cagctgcgag cgctccggcg tgccctgcac gaagctggtc
    13801 accgccagac cgaccttctc gtgtacccag tcgacgttgg cgatcggcag atagtggtcc
    13861 tgcagcgact gggtgatggc cactttcgac cagtccagca gcttgccatc gaggcggatg
    13921 aacggttcga tgctgaagct gcccttggcc ggctccagtg cgccgtcttc gctgatcagc
    13981 gcctgctcct ggccgccatc gaggcccagc agggtccagt acggctgttc accgacatag
    14041 gcgcgcggca gcgcgccacg cggcaggtcg gcggccaccg acgacaggaa tgcgttcgga
    14101 gtggcggcaa aggccagcgg cttgagcatg atgtcgcgga tgccatagcg ccaattcggg
    14161 ccgtcctgca ggtcgaagcg cacgtagcgt gcgtcggtat ccggcagcgc cagccagtcg
    14221 cggccaccgg caccgctggt cacttcgcgt acggtgcgcc agtcgcggcc atcctccgag
    14281 gtgcgcacgg tataacggcg cgcttccaga tccggcagcc agtcgatcac cgcaccgccg
    14341 atctcgcggc tcttgtgcag gtccaggctg atggtctgct gcttgacgcc cccgctgatc
    14401 cagaacgtat cgctcttgcc gtcgatcatg cggtcctgca gcgcggtggc agtatcggcg
    14461 atcaccgatg gcaccagcgc tgaatcatcc tgcggcggca ggccctgcag ggtcagcctg
    14521 tcgaagcaca ccgtgccccg gccgccgacc ttgctgtaga tcgtgaactc gaccgcggca
    14581 ctgcgcgcca tctccttctc gggcgacggc ccccacgcct tgtcgatctg ccggcggcgg
    14641 tactcgaccg gcgtccacgc cttggggaag ctgtagccgg ggcggttgac ccaccacacg
    14701 ttgtcaccgc tggcgtcgat cagcttgaac tgcaggtcat tgcccggcga atcaccgcgc
    14761 agctggaagc cgaagcgata gttgaccggg tactcgatgt tgagcgcgcg acggatgccg
    14821 acgtagccgg agaccttgtg gaaatcgtag tcgaggcaca gcgcgcggcc accaccggca
    14881 ccactgaccg ggcgcaacga accactgacc tggtcggaca ggaccagttt ccaggcgccg
    14941 atatcgtcga aatcgtccag cactttcggt gccggcagcg ccggcggcgc ggcgatcgcc
    15001 agggaggtcc acaacaggcc caatccaacg gcgatcgctc gcttcatccc ttgacgctcc
    15061 ccagcaacag accttggatg tagtaccgct gcagcaccag gaacagcgcc agcaccggga
    15121 ccacggtgac caccgcgccg gccatcatca tttccacgtc catgatgtgt tcgcgcgaga
    15181 gggtggccag tgccaccggc aaagtgtagt gctcctggtc ggtcaacacg atcaacggcc
    15241 acatgaaatc gttccatgcg cccatgaagg tgaagatcgc cagggtcacc agcaccggct
    15301 tgagcatcgg cagcacgatc tggaagaaga tgcgcagctc ccctgccccg tcgatgcgcg
    15361 ccgcttccag cagctcgtcc gggatcgaac gcgcgtactg ccgcaccagg aaaatgccga
    15421 acacgctggc cagcgccggc acgatcacgc cgccgaaact gttgaccagg cccagctgct
    15481 tcatcagcag gaacagcggc agcatcgcca cctgcgccgg gatcaccagc gcggccatca
    15541 gcacctggaa caggcgctcg cggccgacga agttcagctt ggcgaaggca tagccggcca
    15601 tggtgttgag cagcagcgaa ccgatggtga tgcccagcga caccagcagg ctgttggcga
    15661 agttgccgcc catgccggtg cgcgcgaaca gctcatggta gttgtgcgtg gtgacgctcg
    15721 aaggcagcag cggcggcggg aaatggctgg cctcgccctg cggcatgaac gacaccgaca
    15781 ccatccacag cagcggcgcc aggctgacca gggccagcac cagcaacgca ccattgatca
    15841 tccacgggta ccagcgcgac tggccgattt cacgactcat accaactgcc tcttgcggcc
    15901 gaaacgcagc atcacggtgg tcaccgccag gatgatcagg aacagcagga acgccaccgc
    15961 ggaggcgcgt cccaggttcc accacttgaa gccttcctcg aacatgaaat acagcacgct
    16021 gacggtgctc tgcagcgggt cgccacgggt catcacgtac ggctcggcga acagctggaa
    16081 gtagccggac acggtaatga ccccgaccac cagcagcacc gggccgagca tcggcagggt
    16141 gatgtgcagg aactgcttcc agcgcgaggc gccgtcgatg cgcgcggcct cgtacaggtc
    16201 atgcgggatc gcctgcaggc cggccaggaa gatcaccatg ttgtagccga agttcttcca
    16261 caccgcgaac agcatgatgg tcggcatcgc ccagttggga tcgcccagcc agtcgatcgg
    16321 gctgatgccc agatggccca ggccgtagtt caccagcccg tagctggtat ggaacaggta
    16381 acgccagatc accgccaccg ccaccagtgt ggtcaccacc ggggcgaaca gcgcggtgcg
    16441 gaacagcgcc ttgaagcgcg cggccggtgc attgagcagc atcgccgcgc ccagcgacac
    16501 gccgatcgac aacggcacgc cgatcagcac gaagtaggtg gtgttccaca acgacttcca
    16561 gaacatcggt gtctgcagca gatcaatgta gttgcccagg ccgacgaagc gcaggttgct
    16621 gctgtcagcc agcgcgtaga ggtcgaagtc ggtcacgctc agcgccagcg ccgaggccac
    16681 cggcaggccg aagaacacgc ccagcacgat cagcgaaggg ccggcgaaga tccagccggc
    16741 aagtgaagta cgtttcattg cgcgctcccg gcggccacgg cactgctcga ttgcggcgac
    16801 ggcgcacgct gctgcaggcg ttgttgttca tgcatccagc ggcgcttggc caacaccttg
    16861 tccacgcgct ggtccagctc ttccaccgcc ttgtcctgcg gcaggccacc gcgcaccacc
    16921 ttttcggtga cgatgcgcat ttcctgcacg atgcgctccc actcgagcac cttcggcgtc
    16981 ggcttgaccc gctccagctg gtcacggaac gcaaccgcca gcggatcgtt ggccagcgac
    17041 ggcgcattcc aggtactgcg gcgcggcggc aggtcaccga tgatcgagtg gaagcgcgcc
    17101 tggatttccg gccgcgacag gaactcgatc agcttccacg aggcctcctt ctgctgcgac
    17161 ttgcggaaga tcaccaggct ggtgccaccg gcgatgccgg cccccgggcc atccggaccc
    17221 ggcaatggcg cggtacccca ctgcccttcc agctccttcg gctgcagctt cttgaactcg
    17281 cggatgttcc agggcccgga gatgtagaac acgttgaagc cccggaagaa ctcgtcccag
    17341 acgttggaaa tctgcgtctc ggacatcttc ggcgcccagc cctgctcgaa catgttggcg
    17401 tagaaggcca gcgtgcggcg gaaccccggg ctggcgaaat tgccgcgggt gtcatcgtcg
    17461 cgcagcagcg gatcgggctg ctgcagcgcc agcgacagct gctgctcgaa ctcgttgatc
    17521 ggcatcagca ccgcgtagcg gttcggcccc tgcatcttct tgatcgcggc catctgctcg
    17581 tcccactcct gccaggtgcg cggcggatgg tcgtagccgg ccttggccag caggtccttg
    17641 cggtagtaga tcaggcgggt atcgacatac cacggcacgc cgaccagctc gccatggatc
    17701 acgttggtat cccagatgcc ctggaagtag tccttcgggt ccaccacgga cgaacgctgc
    17761 acgaacggct gcagcggcgt cagcgcgtcg agttcggcga actcgggcac ccaggtgttg
    17821 ccgagctggc atacgtcggg caggccgtcg gcggcgaacg ccgtcagcag cttctcgtgc
    17881 gcggcggtcc agggaatgtt ctgcacatcc accttgatgc cggggttctc ggcctcgaac
    17941 tcatggatca gctcgctgac tacttcggcc tcgcggccca tcgcccagaa acgcacggtg
    18001 gtggtgcccg gctcggtgcg ggcgcagccg gccacggcca gtgcggccag ggcaggcagc
    18061 gcccagcggc gcaggcggtc gatccagttc ggcatcgggt tacttgccct ggcctgtggt
    18121 gcggttggca ttgttcttct gttcctgcgc ggcagccgcg cgtgattcgg cgatacccac
    18181 cgcgcgtgcc gccgcggcct tttcgtcctt ctgcagttcc agcggctgga acgagccttc
    18241 cggcgccagc cagccaccac tgaacccggc ccgttccagc cccttgcgga tgtacgggtt
    18301 cttcttcatc acttcccaca cgaaatcatt ccggtagttg gcgatcatgg tcaggatcgg
    18361 gccctggtcg atggcgatgt agtcgctggc gacccagcca cgatccggca ccaggcggcc
    18421 ggtcttgatc ggaatgtcgt agttgaagct gggattgaac gaatccagga aaccgtagct
    18481 ggaatagatg tagtcgccat agcgcttgtg catctccagc gtggccggga tcacctgctc
    18541 gggcgcgaac accaccgacg cgatcgcggc ggtcggggcg atggtgccgt cgtcgaagtt
    18601 ctcgcgcagg ccggcgccgc gcgaagagta atggcggaac tggcgctgct cgccgcggta
    18661 ttcctgggtg gtgttctgcg ggccgtcgct ggcggtcagg ccccacacgt tctcgccata
    18721 gtccttccac tgcatcgggt tggcgatggc gtactcgcgc tgggccagcg cggccgaacg
    18781 gctgttgagg aaataggtgc tgccgcgctc gcgcatgtac gcgtcctgga tgtcgcggaa
    18841 gtcgatccag acgtggctgt actggtggcc gaacagcggg ccgaaggaca ggtattcctg
    18901 gccctggtag acaccccagt cgttgtcgta ggtccgcgtc cataccgtcc aggcatccag
    18961 gctgaccggg tgcgtcggcg agccaagggc aaggatgtag accatcatcg cctcgttgta
    19021 gcccatccag tcatggtcga tgaagccgct ttcggggaac cagcccatcg agatcagcgg
    19081 tgcacgctgc tgcagccacg gccagtcgat cttcctgtac agcgtgtcgg cgatctggcg
    19141 gatttccttc tcgcgcggat cgtcgccatc gtagtacgac tgcgcgaaca gcacgcccat
    19201 catcagcaac gcggtatcca ccgacgaaag ctcgacccag ctgtcgtagc gacggccttc
    19261 ctgcatgtcc aggaagtggt agtagaagcc cttgtagccg gccttgccgg tgcgctgcgg
    19321 gcccatcggc acgtcgcgga agaacttcag cgtggtcagg gtgcggtcga tcgcctggtt
    19381 gcggctgacc cagccgttct cgatgccgat cggataggcg gtcagcgcga agccgaccga
    19441 ggcgatgctg gcgaacggcc gcgacggata gcggtccggg gtcaggccgt tgatctcgtt
    19501 ggtggtgtcc cagaagaact ggaaggtgcg gcgctcgatg tcgtcgaaca gcggcggcag
    19561 ctccggcttc atcggccgcg gcggtgcatc ggcctcgatc aggatcaccg gcggccgcgg
    19621 cttggcaggc tcctgctggg ccggctggca ggcggccacg gccaggctca acgctgcggc
    19681 ggacaacaga tggcgtgcct gcatggcgcg gttcctccgg tggtctgatc gatgggaaag
    19741 cataacgtcc aatgatctga aatcgtttac aaggtgcagg ctgaaaaaac cacgaaaaac
    19801 gtggtttgac accgcgatca ttgcccacgc cgctgccc
//
LOCUS       DAOKIP010000058        19572 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.058,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000058 DAOKIP010000000
VERSION     DAOKIP010000058.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 19572)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19572)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19572
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.058"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            123..1055
                     /locus_tag="QEL58_001779"
     CDS             123..1055
                     /locus_tag="QEL58_001779"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004137180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HDS1676257.1"
                     /translation="MTADPSIHTIDTGFQRPDFDAAYLIVENGRAAFVDCGTGLSVPA
                     MLQALADAGLGVEAVDWLLLTHVHLDHAGGAGLLMQQLPNARAVLHPRGAPHMIDPTR
                     LIAGATAVYGAEEIARSYGRIEAIPETRVVVAEDGHRIDLAGRELLLLHTPGHALHHY
                     CVWDARSRSWFTGDTFGISYRELDSAQGAFIFPTSSPVQFDPEAMKASIRRMLDYAPQ
                     AMYLTHYGRVEQVQKLADDLFEQIDAMATIGRQCDGRPDRHRCLLAALQALYLERAQQ
                     HGCALDQAAVTAVLAMDIELNAQGLACWLDRVRR"
     gene            1161..2813
                     /locus_tag="QEL58_001780"
     CDS             1161..2813
                     /locus_tag="QEL58_001780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005407715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M28 family peptidase"
                     /protein_id="HDS1676258.1"
                     /translation="MRVLLLSSCLFVGGLAQAANDLPGGGIDPQALSRHVRVLASDEF
                     EGRAPATEGEERTVQYLIEQFRSYGLQPGGVDGSWVQPVPLVRAQLDGAAKASLSLKG
                     GKRALVNGEDVTLQSLQPRKRVQIKDAPLVFVGYGIDAPERHWNDYKDVDLHGKIAVV
                     LINDADFEADAPGAFDGKAVTYYGRWTYKFEEAARRGAEGVLIVHETAPAAYGWATVK
                     SSGTSPLFDIERGQAEAMAQHTPLRGWMQRGLAEAIFADAGLDFDAEKRKAMRADFRP
                     VALDNAKLSVDFALKREQVVTRNVVAKLPGGEHGDEAVIFSAHWDAFGIGQPDAKGDR
                     IRRGAIDNATGVATVLELGRVFAAGPQPQRTLYFVALTAEEKGLLGASYYAAHPLAPL
                     DKTAAVLNIEMFSPDGPTRDIASWGKGRVSLEGDLERVAKARGRSYSPDPNLEAGFFY
                     RADHFAFARLGVPAITIGPGLDKLDGGVEAGRALREKYFADCYHQACDAWTPSWDPSG
                     HAADTLLVYDLGAELANSRRWPTWEKESEFRGARDKSEAARR"
     gene            complement(3179..4513)
                     /locus_tag="QEL58_001781"
     CDS             complement(3179..4513)
                     /locus_tag="QEL58_001781"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDS1676259.1"
                     /translation="MSTTSQPAVPANDRAALRRSISNTLKGSAGNLVEWYDVYVYSVF
                     AVYFESQFFSPDDKNSTMYVWAIFAATFLMRPIGAWFFGRFADRHGRRLALTVSVTLM
                     AVCSFLIAITPTAASIGIWAAVILLFARLLQGFATGGEYGASATYMSEAAIPGRRGFL
                     SSFHYVTLVGGHVLAQLTLLLMLTFWGKPEISEWGWRIAFGIGGIAAVVVFWLRRGMD
                     ESLSESSIEAAREGKAQKSGSMYELFVHQWRPLLLCFLITAGGTVAFYTYSVNGPKMI
                     QSAFAGNDPMTGTLINLGVLTFLMVLQPVGGWLSDIIGRKTLLVFFGVGGVLYSWYLI
                     TQLPHQHDATLAFLTLAMAFVILTGYTSINAVVKAELFPTHVRALGVGLGYALANSLF
                     GGTAPLLYQGALKTGHVDWFAIYVTATIAVSLVVYVFFLTNKGPNWLDGTRK"
     gene            4737..5642
                     /gene="yedA"
                     /locus_tag="QEL58_001782"
     CDS             4737..5642
                     /gene="yedA"
                     /locus_tag="QEL58_001782"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019338651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="drug/metabolite exporter YedA"
                     /protein_id="HDS1676260.1"
                     /translation="MSAPPSPSAAAPRGGLVALALLLVYVVWGSTYLGIAKALHGGAL
                     PLTMVSGSRFIIAGGVMYLALRLFWKLPNPTLRQWRNLVIMGVTMLVLGNGMVVLAER
                     EVSSGLAATAVASVPLWMALFSALRGQHASRGEWLGIAIGFLGVVWLNAGSSLTASPT
                     GLVLLLIAPVGWAFGSVWARGLDLPGPFMTAAGQMICGGVLLVLIGLAVGERPTTLPD
                     TSGLLAMAYLCVFGSIVAFTAYVWLLQNVRPALAGSYAYVNPVIAVLLGALLNGERFG
                     WRDLLAMAVILLGVVVLTMARTRKR"
     gene            5639..6538
                     /gene="rarD"
                     /locus_tag="QEL58_001783"
     CDS             5639..6538
                     /gene="rarD"
                     /locus_tag="QEL58_001783"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019338652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter RarD"
                     /protein_id="HDS1676261.1"
                     /translation="MSMDEKEQRRGLLVTASTFVIWGLVPVYWHLLNEVPSFQIIAHR
                     IIWSTVMVLGWLLISSRLGWWKKIAAQPRALPILLVSSLTIAFNWGLYIWAVNAGHVI
                     ETSLGYFINPLVNVLLGVLVLKERLRRLQWVAVAMAAVGVAWLTIDAGTPPWIALGLA
                     CSFGLYGLLRKLVSVDPVAGLGVESLYLFLPALAFAIWAENGHGGAFFHGWGWRNDLL
                     LIFGGAVTAVPLIGFAYGVKRIPLSLVGILQYIAPSLQLLLGVFFFHEGFDTGKAIGF
                     AAIWAGLVLFVGDNIRTMRAAKR"
     gene            complement(6660..9485)
                     /locus_tag="QEL58_001784"
     CDS             complement(6660..9485)
                     /locus_tag="QEL58_001784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005407725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDS1676262.1"
                     /translation="MSLKTTPLRNAIVIALAASCTTPAFAQSAGDTTTNLDRIEITGS
                     RIRQASVETAQPVIALSRAEIDKKGYVNVADILQDIPAAGAPSMSRASSLTSSRDFGG
                     MYVSLRNLGPERSLVLIDGRRMGVSAGGYSDLASIPSAIVERVEVLTDGASALYGSDA
                     IAGVVNIITRRNFDGGQASAYVGQYGEGDGQKRSYSATFGKTFDRGWFSVGAERTKED
                     EVLGKDREFSRYPNGPRHPNDGLNGNTPWGYVTVGGKNLTVGPGGDPSKAGNFHAPDP
                     ADGANTKSNMSLQTGLERTSVFANGGFSITDDLRIVADALYSKRESIKHLAGYPYSVT
                     AAQARSGSRAALSKDSAFNLWGQDVLFAHRTEELPRGTENNLETKRASIGLEGSFETG
                     SRYWDWNVSYMYNRNEGERIGTGSMYQPHVNLAVGPSFMDGDVARCGTPGAVIAGCVP
                     WNPAAPMGYTGPGSLSNQDVQDYLFTRFVDKMQSTTKVASGNISGSLFTLPAGDILAA
                     LGVEHRSEEASYTPDAKVQKGEIAGTSGQPTRGNYSLNEVYLELQVPLLADLPFAREL
                     SLDVAGRYSDYNNFGSTTNSKFGLKWKPIDSLLVRATYGTGFRAPTVDDLYGGTVSSR
                     DAFTDPCDTSFGTAATSAAVAARCQALKVPANFRQLNSDGSVATKPGQQATTDFSSGS
                     NPELKPETAKTWTVGLVYSPDFVPGLDVSLDWWKIRINNAIVGESATNLLEQCYVQGS
                     DAACGRFTRGSNGQVNSLDRSLVNAGFRETAGYDINLRYRLPDTTFGKFAVNWNTTYT
                     DYLEQRNDNAVTTPVEQRTGWGGDFRVRSTFNLDWQYGDFGIGWTARYYSSMKEKCSY
                     MDECNLPDFNSPYTSTSPTNKVGSNTFHDLQVRYSLPWDGTVSLGVNNVFNHQGPTMY
                     SQPNSSFTYYGGFDIGRFMYMKYQQRF"
     gene            complement(9949..11271)
                     /locus_tag="QEL58_001785"
     CDS             complement(9949..11271)
                     /locus_tag="QEL58_001785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014645640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDS1676263.1"
                     /translation="MFKSKLKKWLGNALTVLLLVIGLVLWISLPWIGVLAVAVLVALW
                     LLLTRGGRLALAATRIGVASLPQRWGASSVIVVGIAGVVGVLVAMLAMGEGFQATLNN
                     TGDDTTAIVLRGGSQAETNSVITREQVPTLSTLPGISRDAQGRPMLSPELSQVVNLVS
                     KADGTDVNAQFRGVGPQAWAVHDKVKIIEGRRFAAGLREIVVGQGARGQFRDMDVGRT
                     LTLGNQTWTVVGVFATGDAHDSELWTDADTLATTYQRSAWQSISVRTDGKAGFEQFKT
                     AVAADPRLKLDVETTRVYYSKQGGGLTKLIDILGKVIGTIMAVGAVFGALNTMYAAVA
                     TRAREIATMRAIGFRGLPVVTAVMLETMLLALLGGLLGCAVAWLLFNGYSVSTIGSNF
                     SAVVFKFHVSPELLWTGLKWALGIGLVGGLFPALRAARLPITTALRET"
     gene            complement(11285..12442)
                     /locus_tag="QEL58_001786"
     CDS             complement(11285..12442)
                     /locus_tag="QEL58_001786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010374852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDS1676264.1"
                     /translation="MKYFSLVWAQLFRSRTRTLLTLLSVVAAFLLFGMLDSVRVAFNS
                     GGSVEGANRLVVASRLSITQSLPIRLETQIRQVAGVRDVAYGMWFGGIYQDPKNFFPN
                     FSVSPNYFDVYRELQIDPAQLEDWKQTRTGAIVGETLAKQFGWKIGDTIPLQATIFPR
                     GGSNDWPLELKGIYRSKDRALAANEERQLMMNWKYFDESNDYIKNQVSWYTVTLDNPD
                     HSSRVAQAIDAISANSDHETKTQTESAFQQAFVKQFADIGMIVTSIMGAVFFTLLLLT
                     GNTMAQAVRERVPELATLKTLGFRDSTVLTLVMVESVLLIGLGGLIGMGLAALVLPAI
                     SPKSMGMLPPHVPTPTWLMGLGLIVVIGIIVGLLPALRAKRLKIVDALAGR"
     gene            complement(12457..13146)
                     /locus_tag="QEL58_001787"
     CDS             complement(12457..13146)
                     /locus_tag="QEL58_001787"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDS1676265.1"
                     /translation="MSTLVSLRNITKTYQRGPEKVQVLHGIDLDIARGDFVALMGPSG
                     SGKTTLLNLIGGLDNPSGGEISIEGERIDQMSGGQLSTWRSHHVGFVFQFYNLMPMLT
                     AQKNVELPLLLTHLSAAQRKRNAEIALTLVGLADRRSHRPNELSGGQQQRVAIARAIV
                     SDPTFLICDEPTGDLDRQSAEEILGLLQQLNREHGKTIIMVTHDPKAAEYATHTVHLD
                     KGELADAPLAH"
     gene            complement(13249..14496)
                     /locus_tag="QEL58_001788"
     CDS             complement(13249..14496)
                     /locus_tag="QEL58_001788"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019338656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HDS1676266.1"
                     /translation="MNASAELLKELRIDRKSPPTASGGRGGGRRWLWIAIIVVVLLIA
                     AAIAFLFGRTPAVEVETAPAVAIQQGSASSSVLDASGYVVARRMATVSAKITGKVREV
                     MIEEGMRVEQGQIMATLDPIDADAQRSLYASQLQAARSQVAGLEAQQKQAAAEASRLQ
                     ALVGQQLVSRSQYDQAVAQRDSLRAQLDTAQRNVKVAHDQLAIADLGVDNNVVRAPFS
                     GVVTAKAAQPGEIVSPLSAGGGFTRTGIGTIVDMDSLEIEVEVGEAFIGRVQPKMPVE
                     ATLNAYPEWKIPGEVIAIIPTADRGKATVKVRVALKVKDPRIVPEMGVRVSFLEQAQP
                     QAASTPQGVRVPAGAVVQRESSTVAFVLGDDSRVQQRTVEAGQAMGKDRQILKGVSAG
                     ESVVVNPPETLRDGAKVQQKQAQ"
     gene            14699..15595
                     /locus_tag="QEL58_001789"
     CDS             14699..15595
                     /locus_tag="QEL58_001789"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014035673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDS1676267.1"
                     /translation="MDPIAPSLARLQQVQVRYRDHTALHGIDLQVRAGQVLALLGRNG
                     AGKSTAISVLLGLRRADAGEVELLGGDPQQRTSRLGLGVMLQSTSLPPMLQVDELVAQ
                     ASACYPDPMPLQEVLQRAGLQALARRRYGQLSGGQQRAVQFAIAICGRPRVLFLDEPT
                     TGLDIQARQGMWQAIRQHVAEGCGVLLTTHYLEEAEALAQQVVVLEQGRVLADAPLAE
                     LRLADRPRRIRCRSALAVDVLRQWPGVQQVQREGEHLQLLASPAEPVVARLLAADAQL
                     CELEVQGAALADAFLDMTREAA"
     gene            15592..16368
                     /locus_tag="QEL58_001790"
     CDS             15592..16368
                     /locus_tag="QEL58_001790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012509793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDS1676268.1"
                     /translation="MNTVIRTPAAARPGWRRALRPYAAELQAELRRAWRTPAFAVPSL
                     LFPVLFYLLFGVLLGRGHAPLYLLATYCVFGAMAPALFGFGVQLALDREGGLLTLKRA
                     LPMPAAAPLLARLAMAVMFALLVAALLIGVARVLGGVHLQPAQMLQLLAVAGLAALPL
                     GAIGLLIGSHVSASAAPAMVNLVYLPLALLSGLWLPLSALPALFSTMAPLWPTWHLAQ
                     LALPVVGLPSAGSIGGHLLVLLAVTVVALLLARRRLRRIG"
     gene            16375..17589
                     /locus_tag="QEL58_001791"
     CDS             16375..17589
                     /locus_tag="QEL58_001791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012478893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HDS1676269.1"
                     /translation="MIGNVRPRLDPPVSSSWLASLLRPAPDSAVAELLRRGKSPWSGA
                     IHLLWSVWIFLTPVLGNGFTLRWLLLTLVSYPLFLLLYARVMLAPRHHGWRYALGMIV
                     LALVLLPWYPSGLSYFVFGCVMIRMSGRSSWWAYLLQLTGLNLLFCGTALYFGYPWQA
                     MVWMPAVSFIVGLVVNVEALSQQRDVALQLSQDEVRRLATTAERERIGRDLHDLLGHT
                     LSLITLKLELARKLHDRGDARARQEIGEAEAIAREALAQVRSAVTGIRASDLAGELAS
                     ARLLLECQQVHLQYTTPPPMPVDVERGLALVLREAATNIVRHAQATRVQVDFMLEERQ
                     LAMQIRDDGRGGVQAEGNGLCGMRERAAALGGQLTLQSPRGEGTVLTVRVPLVAASTP
                     VPPASLAPGGAA"
     gene            17586..18188
                     /locus_tag="QEL58_001792"
     CDS             17586..18188
                     /locus_tag="QEL58_001792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003486570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDS1676270.1"
                     /translation="MIRILLAEDQAMVRGALSALLGLEPDIEVLGSAADGEAAWRMLQ
                     QLKPDILVTDIEMPGLSGLELAQRIARHELPIKVVIVTTFARAGFLRRALEAGVLGYL
                     LKDAPAENLADALRKVNQGIRAIDPQLALDAWSQADPLTDRERRVLRLAGEGRTASEI
                     AEQLGLSHGTVRNYLSECIGKLGVANRIEAYRLARQKGWL"
     gene            18664..>19572
                     /locus_tag="QEL58_001793"
     CDS             18664..>19572
                     /locus_tag="QEL58_001793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005407612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HDS1676271.1"
                     /translation="MFGIGIDVSKATLDVAVHEEQFRQFSNDKRGIASLIKWLKKWPI
                     KQVVLEASGGYERAALDVLHAAGLPMVRINPARARRFAQGTGRAAKTDRIDAMVLAQM
                     AHLLPLTRYVPPAAWQKRLAEFAQCRRHLVQMRVSEMHRLRRLVDPDLIAMKQRHIAQ
                     LSDDLKQLDKAIAEQLEGQPGWQGVGSLKGVGPILVSTLACELPELGSLGSKAIASLV
                     GLAPMNRESGSWQGQRRISGGRAVVREALYMAALTAIRYEPRLRDFYAGLKAKGKASK
                     VALVAVMRKMLVILNARKRDAEVALGS"
BASE COUNT         3037 a         6307 c         6880 g         3348 t
ORIGIN      
        1 tgtaccgcag tcgagcaagc tcgactctac cgaagtgcgc ctccgaccaa agccgcatcg
       61 aacccgggcc gcgtgagcgc ctaccatggg attctgttcc cgttcctgcc aggtgcgtgc
      121 cgatgaccgc cgaccccagc atccacacca tcgataccgg cttccagcgt ccggatttcg
      181 acgcggccta tctgatcgtt gaaaacggcc gcgccgcgtt cgtcgactgc ggcaccggcc
      241 tgtcggtgcc ggcgatgctg caggcgctgg cggacgccgg cctgggcgtg gaagcggtgg
      301 actggctgct gctcacccac gtgcatcttg accacgccgg gggcgccggc ctgctgatgc
      361 agcagctgcc gaacgccagg gcggtactgc acccgcgcgg tgcgccgcac atgatcgacc
      421 cgacccggct gattgccggt gccacggcgg tgtacggtgc cgaggaaatc gcgcgcagct
      481 acggccgcat cgaggcgatt ccggagacgc gcgttgtggt ggccgaagac gggcaccgca
      541 tcgatctggc cggccgcgag ctgctgctgt tgcacacgcc gggccatgcg ctgcaccact
      601 actgcgtgtg ggacgcgcgc agccgcagct ggttcaccgg cgatacgttc ggcatctcct
      661 accgcgagct ggacagcgcg cagggcgctt tcatcttccc cacctcgtcg ccggtgcagt
      721 tcgatccgga ggcgatgaag gcctcgatcc ggcgcatgct cgactacgcg ccgcaggcga
      781 tgtacctgac ccactatggt cgcgtcgagc aggtgcagaa gctggccgac gatctgttcg
      841 aacagatcga tgcgatggcc accatcggcc gacagtgcga tggccggccc gatcgccatc
      901 gctgcctgct ggccgcgttg caggcgctgt acctggagcg cgcgcagcag catggctgtg
      961 cgctggacca ggccgcggtg acggcggtgc tggcgatgga catcgaactc aacgcacagg
     1021 gcctggcctg ctggctggac cgcgtccgca ggtagatcca cgccacgcgt ggatgaggcg
     1081 agccgacgct gcaccgcgac gtcatgacca cgttacactc tggtgacttc caagcctgcc
     1141 gtggtattgc cgtgaatccg atgcgcgtgt tgctgctgtc gtcctgcctg ttcgtgggtg
     1201 gcctggccca ggcggccaat gacctgcccg gcggcggcat cgatccgcag gcactgtcgc
     1261 gccacgtgcg cgtgctggca tcggatgaat tcgagggccg cgcgccggcc accgaaggcg
     1321 aagagcgcac ggtgcagtac ctgatcgagc agttccgcag ctacggcctg cagccgggcg
     1381 gcgtggacgg cagctgggtg cagccggtgc cgctggtgcg tgcgcagctg gacggtgctg
     1441 ccaaggccag cctgtcgctg aagggcggca agcgtgcact ggtgaacggc gaggacgtga
     1501 ccctgcagag cctgcagccg cgcaagcgcg tgcagatcaa ggacgcgccg ctggtgttcg
     1561 tcggctacgg catcgacgcg ccggaacgcc actggaacga ctacaaggac gtggacctgc
     1621 acggcaagat cgccgtggtg ctgatcaacg atgccgattt cgaggccgat gcgccgggcg
     1681 cgttcgatgg caaggcggtg acctactacg gccgctggac ctacaagttc gaggaagccg
     1741 cacgccgtgg cgccgaaggc gtgctgatcg tgcacgagac cgcgccggcc gcctacggct
     1801 gggccacggt gaagagctcg ggcacctcgc cgctgttcga catcgagcgc ggccaggccg
     1861 aggcgatggc ccagcacacg ccgctgcgtg gctggatgca gcgcgggctg gcagaggcga
     1921 tcttcgccga cgccggtctc gacttcgatg ccgagaagcg caaggcgatg cgcgccgact
     1981 tccgtccggt ggcgctggac aacgccaagc tgagcgtgga ttttgcgctg aagcgcgagc
     2041 aggtggtgac ccgcaacgtg gtggccaagc tgcccggcgg tgagcacggc gacgaggcgg
     2101 tgatcttctc ggcgcattgg gatgcattcg gcatcggcca gcccgatgcc aagggcgacc
     2161 gcatccgccg cggtgcgatc gacaacgcca cgggtgtggc cacggtgctg gaactgggcc
     2221 gcgtgtttgc cgcaggcccg cagccgcagc gcacgctgta cttcgtggcg ctgaccgccg
     2281 aagagaaggg cctgctgggt gccagctact acgccgcgca tccgctggcg ccgctggaca
     2341 agaccgccgc ggtgctgaac atcgagatgt tcagcccgga cggcccgacc cgcgacatcg
     2401 cctcgtgggg caagggccgg gtgtcgctgg agggcgacct ggagcgcgtg gccaaggccc
     2461 gcggccgcag ttacagcccg gacccgaacc tggaggcggg cttcttctac cgcgccgacc
     2521 acttcgcctt cgcccgcctg ggcgtgccgg cgatcaccat cggcccgggc ctggacaagc
     2581 tggacggtgg cgtggaagcc ggccgcgcgc tgcgcgagaa gtacttcgcc gactgctacc
     2641 accaggcctg cgatgcctgg accccgagct gggacccgag cggccacgcc gccgataccc
     2701 tgctggtcta cgacctgggc gcggagctgg ccaacagccg ccgttggccg acctgggaaa
     2761 aggaatcgga gttccgcggc gcgcgcgaca agagcgaagc cgctcgccgc tgaggtagtg
     2821 ccggcgcagc agcgcgtaag cgccccagcc ggcggccgca agcgcggcca gataacacgc
     2881 caccatcgtg cgcaggccaa cctgcgaccc ggcgttgatg ccgcgatgca ggcgcagctg
     2941 cagcgagctg tggccgctgc ccaggtccac cgccagctgc agcgccagcg cggcacagaa
     3001 caccagcagg gcgatcccga agccgatacg cggccacgat gcctgcgcgc cggggcggcg
     3061 cagcagccag gccagtgccg tggctgcggc cagcgtcgcc gcgatccaca tcagaggcgt
     3121 ggcgggagac gcagcggcca ccggcagtgc accggtggcc gcgatcacta cagcgccctt
     3181 acttgcgggt gccgtcgagc cagttcgggc ccttgttggt gaggaagaac acatagacca
     3241 ccaacgatac cgcgatcgtc gcggtgacat agatggcgaa ccagtcgacg tggccggtct
     3301 tcagcgcacc ctggtacagc agcggggcgg tgccgccgaa cagcgagttg gccagtgcat
     3361 agcccaggcc cacgcccagt gcacgcacgt gggtggggaa cagttcggcc ttcaccaccg
     3421 cgttgatcga ggtgtagccg gtgaggatga cgaacgccat ggccagggtc aggaaggcca
     3481 gggtggcgtc atgctggtgc ggcagctggg tgatcaggta ccagctgtac agcacgccgc
     3541 cgacgccgaa gaacaccagc agggtcttgc ggccgatgat gtccgacagc cagccaccga
     3601 ccggctgcag caccatcagg aacgtcagca cacccaggtt gatcagggtg ccggtcatcg
     3661 ggtcgttgcc ggcgaaggcg ctctggatca tcttcgggcc gttcaccgaa taggtgtaga
     3721 aggccacggt gccaccggcg gtgatcagga agcacagcag cagcggccgc cactggtgca
     3781 cgaacagttc gtacatcgag ccggacttct gtgccttgcc ttcgcgcgcg gcctcgatgg
     3841 acgactccga cagcgactcg tccatgcccc ggcgcagcca gaacaccacc accgcggcga
     3901 tgccgccgat gccgaaggcg atgcgccagc cccactcgga gatttccggc ttgccccaga
     3961 aggtcagcat cagcagcagg gtcagctggg ccagcacatg gccgccgacc agggtgacgt
     4021 agtggaacga ggacaggaaa ccgcgacggc cgggaatggc ggcctcggac atgtaggtgg
     4081 cactggcacc gtactcgcca ccggtcgcga agccctgcag caggcgcgcg aacagcagga
     4141 tgaccgccgc ccagatgccg atgctggccg cggtgggcgt gatggcgatg aggaaggaac
     4201 agacggccat cagggtgacc gagacggtca acgccaggcg gcggccgtgg cggtcggcga
     4261 agcggccgaa gaaccaggcg ccgatcgggc gcatcaggaa cgtggcggcg aagatcgccc
     4321 acacatacat ggtggagttc ttgtcgtccg gcgagaagaa ctgcgattcg aagtacacgg
     4381 cgaacaccga gtacacgtag acgtcgtacc actccaccag gttgccggcg gagcctttga
     4441 gggtgttgga gatcgaccgc cgcagggcgg cgcggtcgtt cgcgggaaca gcaggttggg
     4501 acgtggtgct catctgggtg ggaatcctcg atgcggcgcg tccgtgcgca gggaaaacgg
     4561 cgcccggcct tggggcggcg cggccgggca gccctcttgg tactgcatcg accgtcaaca
     4621 cggggtagca gaccagagca gggtgcatgg atggatgaca gcgtgccacc gtccggggtc
     4681 ccggaccata ctcaaaacgt cctagaatcc gccttccccc ggctccttgg tgcgtcatgt
     4741 cggctccccc ctctccgtct gcggctgccc cccggggtgg ccttgtcgcg ctggcactgc
     4801 tgctggtcta tgtggtctgg ggctcgacct acctgggcat cgccaaggcc ctgcacggcg
     4861 gcgcgctgcc gctgacgatg gtctccggca gccgcttcat cattgccggc ggggtgatgt
     4921 acctggcgct gcgcctgttc tggaagctgc ccaacccgac cctgcggcag tggcgcaatc
     4981 tggtcatcat gggcgtgacc atgctggtgc tgggcaatgg catggtggtg ctggccgagc
     5041 gcgaggtgtc ctcgggcctg gccgccacgg ccgtggcctc ggtgccgctg tggatggcgc
     5101 tgttctcggc gctgcgcggc cagcacgcca gccgcggcga gtggctgggt atcgccatcg
     5161 gcttcctggg cgtggtctgg ctcaatgccg gcagcagcct gaccgcatcg ccaaccgggc
     5221 tggtactgct gctgatcgca ccggtcggct gggcgttcgg ttcggtgtgg gcgcgcggcc
     5281 tggacctgcc gggcccgttc atgaccgcgg ccgggcagat gatctgcggc ggcgttctgc
     5341 tggtgctgat cggcctggcg gtgggcgagc gcccgaccac cttgcccgac accagcggcc
     5401 tgctggcgat ggcctacctg tgcgtgttcg gttccatcgt cgcgttcacc gcttatgtat
     5461 ggctgctgca gaacgtgcgc ccggcgctcg cgggcagcta cgcgtacgtc aacccggtga
     5521 tcgcggtgct gctgggcgcg ctgctcaacg gtgaacggtt cggctggcgc gacctgctgg
     5581 ccatggcggt gattcttctg ggtgtggtgg tgttgacgat ggcaaggacg cgaaagagat
     5641 gagcatggac gagaaagaac aacgccgggg cctgctggtc accgcgtcca ccttcgtgat
     5701 ctgggggctg gtgccggtgt actggcacct gctcaacgag gtgccctcgt tccagatcat
     5761 cgcccaccgc atcatctgga gcacggtgat ggtgctgggc tggctgctga tcagctcgcg
     5821 cctgggctgg tggaagaaga ttgcggcgca gccgcgcgcg ctgccgatcc tgctggtatc
     5881 gagcctgacc attgccttca actggggcct gtacatctgg gcagtcaatg ccgggcatgt
     5941 gatcgagacc agcctgggct acttcatcaa tccgctggtg aacgtgctgc tgggcgtgct
     6001 ggtgctgaag gaacgcctgc gccgcctgca gtgggtggcg gtggcgatgg cggcggtggg
     6061 cgtggcctgg ctgaccatcg atgccggcac gccgccgtgg atcgcgctgg gcctggcctg
     6121 ttcgttcggc ctgtacgggc tgctgcgcaa gctggtctcg gtcgatccgg tggctggcct
     6181 gggcgtggag agcctgtacc tgttcctgcc ggcgctggcg ttcgcgatct gggccgagaa
     6241 cggccatggc ggtgccttct tccatggctg gggctggcgc aacgatctgc tgctgatctt
     6301 cggcggcgcg gtcacggcgg taccgctgat cggctttgcc tacggcgtga agcgcattcc
     6361 gctgtcgctg gtcggcatcc tgcagtacat cgcgccgagc ctgcagctgc tgctgggcgt
     6421 gttcttcttc cacgaaggat tcgataccgg caaggcgatc ggctttgccg cgatctgggc
     6481 cggcctggtg ctgtttgtcg gcgacaacat ccgcacgatg cgcgctgcga agcgatagcg
     6541 ccgggccagg cccggcgaac acgatgcagc aaaaaagaac ggcgccccga agggcgccgt
     6601 tctgcttcca tccaccgcca ggagagagag atggcggtgg cgggaacgcg gttgcaggct
     6661 tagaagcgct gctggtactt catgtacatg aagcggccga tgtcgaagcc accgtagtag
     6721 gtgaagctgc tgttcggctg gctgtacatg gtcggaccct ggtggttgaa cacgttgttc
     6781 acgcccagcg acacggtgcc atcccacggc aggctgtaac gcacctgcag gtcgtggaag
     6841 gtgttggagc ccaccttgtt ggtcggcgag gtgctggtgt acggcgagtt gaagtccggc
     6901 aggttgcact cgtccatgta cgagcacttc tccttcatgc tggagtagta gcgcgcggtc
     6961 cagccgatgc cgaagtcgcc gtactgccaa tccaggttga aggtggagcg cacgcggaag
     7021 tcgccgcccc aaccggtacg ctgttccacc ggagtggtga cggcgttgtc gttgcgctgc
     7081 tccaggtagt cggtgtaggt ggtgttccag ttgacggcga acttgccgaa cgtggtgtcc
     7141 ggcaggcggt agcgcaggtt gatgtcatag ccggcggtct cgcggaaacc ggcgttgacc
     7201 agcgagcggt ccaggctgtt gacctggccg ttgctgccgc gggtgaagcg gccacaggca
     7261 gcgtccgaac cctgcacgta gcactgttcc agcaggttgg tggccgactc gccgacgatg
     7321 gcgttgttga tgcggatctt ccaccagtcc aggctgacgt ccaggcctgg cacgaagtcc
     7381 gggctgtaca ccaggccgac ggtccaggtc ttggcggttt ccggcttcag ttccgggttg
     7441 gaaccggagc tgaaatcggt ggtggcctgc tggccgggct tggtggccac gctgccatcg
     7501 ctgttgagct ggcggaagtt ggccggcacc ttcagcgcct ggcagcgggc ggcgacggcg
     7561 gcgctggtgg cggcggtacc gaaggaggta tcgcacggat cggtgaacgc gtcacggctg
     7621 ctgacggtgc cgccatacag gtcgtccacg gtcggcgcac ggaagccggt gccgtaggtg
     7681 gcgcgcacca gcaggctgtc gatcggcttc cacttcagcc cgaacttgct gttggtggtc
     7741 gaaccgaagt tgttgtaatc cgagtagcga ccggccacgt ccagcgacag ttcacgcgcg
     7801 aacggcaggt cggccagcaa cggcacctgc agctccaggt agacctcgtt gagcgagtag
     7861 ttgccacggg tcggctggcc actggtaccg gcgatctcgc ccttctgcac cttcgcatcc
     7921 ggggtgtagc tggcttcttc gctgcggtgc tcgacgccca gcgcggccag gatgtcgccg
     7981 gccggcaggg tgaacagcga gccggagatg ttgccgctgg cgaccttggt ggtgctctgc
     8041 atcttgtcga cgaagcgggt gaacaggtag tcctgcacgt cctggttgct cagcgagccc
     8101 gggccggtgt agcccatcgg cgctgccggg ttccacggca cgcagccggc gatcaccgcg
     8161 cccggcgtac cgcagcgggc cacgtcgcca tccatgaagg acgggccgac ggccaggttg
     8221 acgtgcggct ggtacatgct gccggtaccg atgcgctcgc cttcattgcg gttgtacatg
     8281 tagctgacgt tccagtccca gtaccgcgaa ccggtttcga agctgccttc caggccgatg
     8341 ctggcgcgct tggtttccag gttgttctcg gtgccgcgcg gcagttcctc ggtgcggtgt
     8401 gcgaacagca catcctggcc ccacaggttg aatgcgctgt ccttggacag cgcggcgcgg
     8461 ctgccgctgc gtgcctgcgc ggcagtcacc gagtacgggt aaccggccag gtgcttgatc
     8521 gactcgcgct tgctgtacag cgcgtcggcg acgatgcgca ggtcgtcggt gatggagaag
     8581 ccaccgttgg cgaacaccga ggtgcgctcc aggccggtct gcaggctcat gttcgacttg
     8641 gtgttggcac cgtcggccgg gtccggcgcg tggaagttgc ccgccttgct ggggtcgccg
     8701 cccgggccca cggtcaggtt cttgccaccc acggtgacgt agccccacgg ggtgttgccg
     8761 ttcaggccat cattggggtg gcgcgggccg ttcgggtaac ggctgaactc gcggtccttg
     8821 cccagcacct cgtcttcctt ggtgcgctcg gcgccgacgc tgaaccagcc gcggtcgaag
     8881 gtcttgccga aggtggcgct gtaggagcgc ttctggccgt cgccttcgcc gtactggccg
     8941 acgtaggcac tggcctggcc gccatcgaag ttcctgcggg tgatgatgtt gaccacgccg
     9001 gcgatggcat cggagccgta cagtgcggag gcaccgtcag tcagcacttc cacgcgctcg
     9061 acaatcgccg acgggatcga ggccagatcg gagtaaccgc cggcgctgac gcccatgcgg
     9121 cggccgtcga tcagcaccag gctgcgttcc gggcccaggt tgcgcaggct gacgtacatg
     9181 ccgccgaagt cgcgcgagga ggtcagcgac gaggcgcggc tcatgctggg cgcgcctgct
     9241 gcaggaatgt cctgcaggat gtcggcgacg ttgacgtagc ccttcttgtc gatctcggcg
     9301 cggctgagcg cgatcaccgg ctgtgcggtt tcgacactgg cctggcggat gcgcgagccg
     9361 gtgatttcga tgcggtcgag gttggtggtg gtatcgccgg cgctctgcgc aaaggcgggg
     9421 gtggtgcagc tggcagccag cgcgatcacg atcgcgttgc gcagcggagt ggttttcagg
     9481 gacatccgtg acatctcgtg tttcaggaaa aacaagcgcc cgttctgtgg gcgcgtgggg
     9541 tgctgcaaac caacgtgggg ggccggattc tagagtgttt ccatccgtaa ctgtttgcct
     9601 ccgtgctgct gcatgcgtgc gaaaatgaat cgcaaccaac aatccacaga tgcactgtgc
     9661 gcaacgtcac gtgcgctgcg tttgcaatgg gcagaggcat cgatagcggc gctatccgcg
     9721 caatctgtag cagcgtgcgt gcgcaggcat ccatccacgc atggcgtgga tctactggac
     9781 gttccggcca ccaccccgcg aggatgcatc gccttcagta gatccacgcc atgcgtggat
     9841 gtccgcatca gtagatccac gccatgcgtg gatgacgctc aaacaaaaaa gggacggagc
     9901 cttcgctccg tccctctgcg cgatgcgcat tccgtcgctg cgtgatgctc aggtttcgcg
     9961 cagtgccgtg gtgatcggca atcgcgccgc gcgcagcgcc gggaacaggc cgccgaccag
    10021 gccgatgccc aatgcccatt tcaggcccgt ccacagcagt tccggcgaca catggaactt
    10081 gaacaccacc gcgctgaaat tgctgccgat ggtggacacg ctgtagccgt tgaacagcag
    10141 ccacgccacc gcgcaaccga gcaggccgcc gagcagggcc agcagcatcg tctccagcat
    10201 caccgcggtc accaccggca ggccacggaa accgatcgca cgcatggtgg cgatctcgcg
    10261 cgcacgcgtg gccacggcgg catacatggt gttgagtgcg ccgaacaccg cacccaccgc
    10321 catgatcgtg ccgatcacct tgccgaggat gtcgatcagc ttggtcagac cgccgccctg
    10381 cttgctgtag tagacgcggg tggtttccac gtccagcttc agccgcgggt cggcggcgac
    10441 ggcggtcttg aactgctcga agccggcctt gccatcggta cgcacgctga tcgactgcca
    10501 ggcactgcgc tgataggtgg tggccagcgt atcggcatcg gtccacagtt ccgaatcatg
    10561 cgcatcgccg gtggcgaaca cgccgaccac ggtccaggtc tggttgccca acgtcagcgt
    10621 cctgccgaca tccatatcgc ggaactggcc gcgtgcgccc tggccgacca cgatctcgcg
    10681 caggccggcg gcgaaccggc gcccttcgat gatcttgacc ttgtcatgca cggcccacgc
    10741 ctgcgggccg acgcctcgga actgcgcgtt gacgtcggtg ccatcggcct tcgacaccag
    10801 gttgaccacc tgcgacagct ccggcgacag cattggccgg ccctgcgcat cacggctgat
    10861 gccgggcagc gtggacagcg tgggtacctg ctcgcgggtg atcaccgagt tggtctcggc
    10921 ctgcgaaccg ccgcgcagca cgatggcagt ggtgtcatcg ccggtgttgt tgagcgtggc
    10981 ctggaagcct tcgcccatcg ccagcatcgc caccagcacg ccgaccacgc cggcgatgcc
    11041 gaccacgatc accgaggagg cgccccagcg ctgcggcagg ctggccacac cgatgcgggt
    11101 ggcggccagc gccagccgtc cgccgcgggt cagcagcagc cacagcgcca ccagtaccgc
    11161 cacggccagt acgccgatcc acggcaggct gatccacagc accaggccga tcaccagcag
    11221 cagcacggtc agcgcgttgc ccagccactt cttgagtttg ctcttgaaca tgtcggtgtc
    11281 ctcctcagcg gccggccagt gcgtcgacga tcttcaggcg cttggcacgc agcgccggca
    11341 acaagccgac gatgatgccg atcaccacga tcaggcccag ccccatcagc caggtcggcg
    11401 ttggcacgtg cggcggcagc atgcccatgc tcttcgggct gatcgcgggc agcaccagtg
    11461 cggccaggcc catgccgatc aggccgccga ggccgatcag cagcaccgac tccaccatca
    11521 ccagggtcag cacggtgctg tccctgaagc ccagcgtctt cagcgtggcc agttcgggca
    11581 cgcgctcgcg caccgcctgc gccatggtgt tgccggtcag cagcagcagg gtgaagaaca
    11641 ccgcgcccat gatcgaggtg acgatcatgc cgatatcggc gaactgcttg acgaaggcct
    11701 gctggaacgc cgactcggtc tgggtcttgg tctcgtggtc ggagttggcc gagatcgcat
    11761 cgatggcctg cgccacgcgc gaggagtggt cgggattgtc cagcgtcacc gtgtaccagc
    11821 tcacctggtt cttgatgtag tcgttggatt catcgaagta cttccagttc atcatcaact
    11881 ggcgttcttc gttggcggcc aatgcacggt ccttggagcg gtagatgccc ttcagttcca
    11941 gcggccagtc gttgctgccg ccgcgcggga agatcgtggc ctgcagcggg atggtgtcac
    12001 cgatcttcca gccgaactgc ttggccaggg tttcgccgac gatggcgccg gtgcgggtct
    12061 gcttccagtc ttccagctgc gccgggtcga tctgcagttc gcggtacacg tcgaagtagt
    12121 tgggcgacac cgagaagttc gggaagaagt tcttcgggtc ctggtagatg ccgccgaacc
    12181 acatgccata ggccacatca cgcacgccgg cgacctggcg gatctgggtc tccaggcgga
    12241 tcggcagcga ctgggtgatc gacagccgcg aggccaccac cagccggttg gccccttcca
    12301 cgctgccgcc ggaattgaag gccacgcgta ccgagtcgag catgccgaac agcaggaacg
    12361 cggccaccac cgagagcagg gtcagcaagg tacgtgtgcg gctgcggaac agctgcgccc
    12421 acaccagtga gaagtatttc atcgcggtgg cctccgtcag tgggccagcg gggcgtcggc
    12481 cagctcgccc ttgtccaggt gcacggtgtg cgtggcgtac tcggccgcct tcgggtcatg
    12541 ggtgaccatg atgatggtct tgccgtgctc gcggttgagc tgctgcagca ggcccaggat
    12601 ctcttcggcg gactggcggt cgaggtcgcc ggtgggttcg tcgcagatca ggaaggtggg
    12661 gtcggagacg atcgcacggg cgatcgccac gcgctgctgc tggccgccgg acagctcatt
    12721 cgggcggtgg ctgcggcggt cggccaggcc gaccagggtc agcgcgatct ccgcattgcg
    12781 cttgcgctgc gcggcgctga ggtgggtcag cagcagcggc agctcgacgt tcttctgcgc
    12841 ggtcagcatc ggcatcaggt tgtagaactg gaacacgaag ccgacgtggt ggctgcgcca
    12901 ggtcgacagc tggccgccgc tcatctggtc gatgcgctcg ccttcgatgc tgatctcgcc
    12961 gccactgggg ttgtccaggc cgccgatcag gttgagcagg gtggtcttgc ccgaaccgga
    13021 tgggcccatc agcgcgacga agtcgccgcg cgcgatgtcc aggtcgatgc cgtgcagcac
    13081 ctgcactttt tcggggccac gctggtaggt cttggtgatg ttgcgcagtg aaaccagggt
    13141 cgacatgggt ggttctccac ggaaggcggg aaacggggca ctgcgcccgc ggtggccgcg
    13201 ggcgtgcgtc gagcggtgct gccggcggcg cgcgggggcg ccaggccgtt actgcgcttg
    13261 tttctgttgc accttggcgc catcgcgcag ggtctccggt ggattgacca ccaccgactc
    13321 gcccgcgctc acgcccttga ggatctggcg gtccttgccc atcgcctggc cggcctcgac
    13381 cgtgcgctgc tgcacgcggc tgtcatcgcc cagcacgaag gcgaccgtgc tgctttcacg
    13441 ttgcaccacc gcgccggccg gcacgcgcac accctgcggc gtgctggcgg cctgcggctg
    13501 tgcctgttcc aggaagctga cccgcacgcc catctccggc acgatgcgcg ggtccttcac
    13561 cttcagtgcc acgcgcacct tcaccgtggc cttgccacgg tcagcggtgg gaatgatggc
    13621 gatcacctcg cccggaatct tccattccgg gtaggcgttg agcgtggctt ccaccggcat
    13681 cttcggctgc acgcggccga tgaaggcctc gccgacctcg acctcgatct ccagcgaatc
    13741 catgtcgacg atggtgccga tgccggtacg ggtgaagcca ccgccggccg acagcggcga
    13801 gacgatttcg cccggttgcg ccgccttggc ggtgaccacg ccggagaacg gcgcacgcac
    13861 cacgttgttg tccacgccga ggtcggcgat ggccaactgg tcgtgggcga ccttgacgtt
    13921 gcgctgggcg gtgtcgagct gggcacgcag gctgtcacgc tgggccacgg cctggtcgta
    13981 ctgcgagcgc gacaccagct gctggccgac cagcgcctgc aggcggctgg cttcggcggc
    14041 ggcctgcttc tgctgcgctt ccagcccggc gacctggctg cgcgcggcct gcagctgcga
    14101 ggcatacagg ctgcgctgcg cgtcggcatc gatcgggtcc agcgtggcca tgatctggcc
    14161 ctgctccacg cgcatgcctt cctcgatcat cacctcgcgc accttgccgg tgatcttggc
    14221 cgacaccgtg gccatgcgcc gggccaccac gtagccgctg gcgtcgagca ccgaactgct
    14281 ggcgctgccc tgctggatgg ccacggcagg cgcggtttcg acttcaacgg ccggcgtgcg
    14341 gccgaacagg aaggcgatgg cggcggcgat cagcagcacc accacgatga tcgcgatcca
    14401 caaccagcgg cggccaccgc ccctgccgcc ggaggcagtt ggcggcgatt tgcggtcgat
    14461 acggagttcc ttcaacagct cggcagaagc gttcattcgt tccatcacag gcgttcgggc
    14521 gggtgtggcc ggaagcgcgg acggcggcgg ttccggcgag ggagcgtgcg gcacagcatg
    14581 aaggcaggta cggcgatgat ggcagtgaca gctgtcatcc gatgacactg acggcggcaa
    14641 ctgcgaaacg tgaccacggc ggcacaggat ggcaacgtcc ccgctaccgg taccgcccat
    14701 ggatccgatc gccccgtcgc tggcccgcct gcagcaggtg caggtgcgct atcgcgacca
    14761 taccgccctg catggcatcg acctgcaggt ccgcgctggc caggtgctgg cattgctggg
    14821 ccgcaacggt gctggcaaga gtaccgcgat cagcgtgttg ttgggcctgc ggcgggccga
    14881 tgccggcgag gtcgagctgc tcggcggcga cccgcagcag cgcaccagcc gactgggcct
    14941 gggcgtgatg ctgcagagca ccagcctgcc gccgatgctg caggtggacg agctggtggc
    15001 gcaggccagc gcctgctatc ccgatcccat gcctctgcag gaggtgctgc agcgcgccgg
    15061 cctgcaggcg ctggcgcgac ggcgttacgg ccagctgtcc ggtggccagc agcgtgccgt
    15121 gcagttcgcc atcgcgatct gcggccgccc gcgcgtgctg ttcctggacg agccgaccac
    15181 cggcctggac atccaggcgc ggcaggggat gtggcaggcg atccggcagc acgtggccga
    15241 gggctgcggc gtgctgctga ccacccatta cctggaggag gccgaagcgc tggcgcagca
    15301 ggtggtggtg ctggagcagg ggcgcgtgct ggccgacgcg cccctggccg aactgcgcct
    15361 ggccgaccgg ccgcggcgca tccggtgccg cagtgcgctg gccgtcgatg tgctgcggca
    15421 gtggcccggc gtgcagcagg tgcagcgcga gggcgagcac ctgcagctgc tggccagccc
    15481 ggccgagccg gtggtggcgc gcctgctggc cgccgacgca cagctgtgcg agctggaagt
    15541 acagggcgcg gcgctggccg acgctttcct cgacatgacc cgggaggccg catgaacacc
    15601 gtgatccgta cgcctgcagc cgcgcgcccg ggatggcgcc gcgccctgcg cccctacgcc
    15661 gctgaactgc aggccgagct gcgccgcgcc tggcgcacgc ccgcgttcgc ggtgccgtcg
    15721 ctgctgttcc cggtgctgtt ctacctgctg ttcggcgtgc tgctggggcg gggccatgcg
    15781 ccgctgtacc tgctggccac ctactgcgtg ttcggcgcga tggcgccggc cctgttcggc
    15841 ttcggcgtgc agctcgcgct ggaccgcgaa ggcggcctgc tgaccctcaa gcgcgcgctg
    15901 ccgatgccgg cagcggcacc gctgctggca cggctggcga tggcggtgat gttcgcgctg
    15961 ctggtggccg cgttgctgat cggcgtggcg cgcgtgctgg gcggcgtgca cctgcaaccc
    16021 gcgcagatgc tgcagctgct ggcggtggcc ggcctggccg cactgccgct gggggcgatc
    16081 ggcctgctga tcggcagcca tgtcagcgcc agtgcggcgc cggcgatggt caacctggtc
    16141 tacctgccgc tggccctgct gtcggggctg tggctgccgc tgtcggcact gcctgcgctg
    16201 ttctcgacga tggcaccgct gtggccgacc tggcatctgg cgcagctggc gctgccggtg
    16261 gtcgggctgc cgtcggcggg cagcatcggc ggccatctgc tggtgctgct ggcggtgacc
    16321 gtggtggcgt tgctgctggc acgccgccgc ctgcgccgga tcggctgaac tggcatgatc
    16381 ggcaacgttc gtccccgtct ggatcctccc gtgtcgtcga gctggcttgc gtccctgctg
    16441 cgccctgcgc cggattcggc cgtggccgaa ctgctgcgac gtggcaagtc gccctggagc
    16501 ggcgcgatcc acctgctgtg gtcggtatgg atcttcctca ccccggtgct gggcaatggc
    16561 ttcacgctgc gctggctgct gctgaccctg gtcagctatc cgctgttcct gctgctctac
    16621 gccagggtga tgctggcgcc acggcaccat gggtggcgct atgcgctggg catgatcgtg
    16681 ctggcgctgg tactgctgcc ctggtacccc tcgggcttga gctacttcgt gttcggctgc
    16741 gtgatgatcc gcatgagcgg gcgcagcagc tggtgggcgt acctgctgca gctgaccggg
    16801 ctgaacctgc tgttctgtgg caccgcgctg tacttcggct atccgtggca ggccatggtg
    16861 tggatgccgg cggtgtcgtt cattgtcggg ctggtggtga acgtggaggc cctgagccag
    16921 cagcgcgacg ttgccctgca gctgtcgcag gacgaagtcc gccggctggc gaccaccgcc
    16981 gagcgcgaac gcatcggccg tgacctgcat gacctgctcg gccacaccct gtcgctgatc
    17041 acgttgaagc tggagctggc gcgcaagctg cacgaccgtg gcgacgcgcg cgcgcggcag
    17101 gagatcggcg aggccgaggc gatcgcccgc gaggcgctgg cacaggtccg cagtgcggtg
    17161 accggcatcc gcgccagtga cctggccggt gagctggcct cggcacgcct gctgctggaa
    17221 tgccagcagg tgcacctgca gtacacgacg ccgccaccga tgccggtgga cgtggaacgt
    17281 ggactggcgc tggtgctgcg cgaagcagcc accaatatcg tgcgccatgc gcaggcgacc
    17341 cgggtgcagg tggatttcat gcttgaggaa cgacagttgg cgatgcagat acgcgatgac
    17401 gggcgcggtg gcgtgcaggc cgagggcaat ggactgtgtg gcatgcgcga acgggcggcg
    17461 gcgctgggtg gccagttgac gcttcagtct ccgcgcggag aaggcacggt gctgaccgtg
    17521 cgcgtgccgc tggtggccgc cagtacgccg gtgccgccgg cgtcattggc accgggcggt
    17581 gcggcatgat ccgcatcctg ctggccgaag accaggcgat ggtacggggt gcgttgtcgg
    17641 cgctgctggg cctggagcct gatatcgagg tactgggcag cgccgccgac ggcgaagccg
    17701 catggcggat gctgcagcag ctgaagccgg acatcctggt gaccgacatc gagatgcctg
    17761 gcctgtccgg gctggaactg gcgcagcgca tcgcccgcca tgagctgccg atcaaggtgg
    17821 tgatcgtgac caccttcgcc cgtgccggct tcctgcgtcg cgcgttggaa gccggcgtgc
    17881 tggggtacct gttgaaggac gcaccggccg agaacctggc cgacgcactg cgcaaggtga
    17941 accagggcat ccgcgcgatc gacccgcagc tggcgctgga tgcatggtcg caggccgacc
    18001 cgctgaccga ccgcgaacgc cgggtgctgc ggctggcggg cgagggccgc acggccagcg
    18061 agatcgccga gcagctgggg ttgtcgcacg gcacggtgcg caattacctg tccgagtgca
    18121 tcggcaagct gggcgtggcc aatcgcatcg aggcgtatcg gctggcgcgg cagaaggggt
    18181 ggttgtaggg gatcatttcc gcgaccgcgg tggggtgtca ctttctttgc tcgtgcaaag
    18241 aaagtaacca aagaaacacg ccgccggccg cgagccggcg tgcttcgcac gccggtgccc
    18301 tgtgctcctc ggtccatcga gggacggtgc gggaactcgc tgcgctcaga cacccgcacc
    18361 tcttcgccct cgccggacct gcggtgctcg gctcgcttga aggcggactg gaaggtcaag
    18421 atcaacggca acggcaatca cgcatggcgt ggatcttatc tcttgccgat ctggcacctt
    18481 gggtgtcgag agcccggcgt gggcgaccgt gtggatcgag gtcttgcgac cgcggagtag
    18541 cttgggtccc cacgccggat tctccctgaa tcgcccgaac agttggttga gttggcgctc
    18601 gaactgataa gactgggcaa gcagggggag ctctcgaccc tgtcagccta gcggagttcg
    18661 gccatgtttg ggatcgggat cgatgtgagc aaggccacac tggatgtggc tgtccacgaa
    18721 gagcagttcc gccaattcag caacgacaag cgtggcattg ccagcttgat taaatggctg
    18781 aagaagtggc ccatcaagca ggttgttctt gaggccagcg ggggttacga gcgtgctgct
    18841 ctggatgtct tgcacgctgc cggcctgccc atggtccgca tcaatccggc gcgtgcacgg
    18901 cggtttgccc aaggcaccgg ccgggctgca aaaaccgatc ggatcgatgc catggtgctg
    18961 gcgcagatgg cccatctgtt gccgcttacg cgctacgtcc cgcccgcggc ctggcagaag
    19021 cgcctggctg aatttgcaca atgccgcagg catctggtgc agatgcgggt cagcgagatg
    19081 catcgcttgc gacgtttggt tgatccagat ctgatcgcca tgaagcaacg ccatatagct
    19141 cagctatctg acgacctgaa gcaattggat aaagctattg ccgagcaact tgaaggacag
    19201 cctggttggc agggcgtcgg ctcgctgaag ggcgtcgggc cgattctggt cagcaccctt
    19261 gcctgcgagc tgccggagct cggcagtttg ggaagcaaag ccattgcatc actggtgggc
    19321 ttggccccga tgaaccgcga aagtggcagc tggcaaggcc aacggcgcat cagcggaggg
    19381 cgcgcagtag tacgtgaagc cctctacatg gccgccttga cggccatccg gtacgagcca
    19441 aggctgcgcg atttttacgc gggcctgaag gccaaaggca aagccagcaa ggtggcactc
    19501 gtcgcagtca tgcgcaaaat gctggtgatc ctcaatgccc gtaaacggga cgccgaggtg
    19561 gccctcggca gc
//
LOCUS       DAOKIP010000059        19493 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.059,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000059 DAOKIP010000000
VERSION     DAOKIP010000059.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 19493)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19493)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19493
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.059"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..1086)
                     /locus_tag="QEL58_001794"
     CDS             complement(<1..1086)
                     /locus_tag="QEL58_001794"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004132783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PA0069 family radical SAM protein"
                     /protein_id="HDS1676272.1"
                     /translation="MGIAIKGRGSTSHLAGRFESTVSEAVDDGWAVDESEEFLAPRLR
                     TEVRAETARSIITRNNSPDVGFSQSVNPYRGCEHGCSYCFARPSHAYLNLSPGLDFET
                     KLFAKTNAPQLLRKELSKPGYVPQPIALGINTDAYQPIERKFKLTRQLIEVMLETRHP
                     FSLITKNALVERDIDLLAPLAAENLVSVHFSVTSLDPHLSAKLEPRASAPHARLRAMK
                     RLHEAGIPVGVMVAPVIPWINDSELEAVLEAAHDAGASTAGYVLLRLPLEVAPLFRDW
                     LDTHHPDRAAHVMSTIQQLRGGKDYDSQFGTRMRGQGVYADLLNNRFKLARKRLGFNA
                     QNSHWPKLDCSRFLKPLPPKKDSPQGSL"
     gene            complement(1231..1974)
                     /locus_tag="QEL58_001795"
     CDS             complement(1231..1974)
                     /locus_tag="QEL58_001795"
                     /EC_number="2.6.99.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019337495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxine 5'-phosphate synthase"
                     /protein_id="HDS1676273.1"
                     /translation="MTQLSVNVNKIAVLRNSRGGAEPDVVRAAQACLDAGAHGITVHP
                     RPDRRHITAEDVLALSTLTRARGVEFNIEGNPFAPPREGYPGLLPLCEQTRPAQATLV
                     PDGDGQITSDHGFDFERDGERLRPLVAELKAMGCRVSLFVDAGNPLLEQAAEVGADRI
                     ELYTGPYAEAHAAGDAEAMLALFATAARRAQAVGLGVNAGHDLSQDNLRDFLAHVPDV
                     LEVSIGHALIGEALYDGLDATVRGYLALL"
     gene            complement(1984..2253)
                     /locus_tag="QEL58_001796"
     CDS             complement(1984..2253)
                     /locus_tag="QEL58_001796"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019658804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676274.1"
                     /translation="MYWLYLLLALGCFAFALKTPSAGLMTLCLLAALAFLLAWVRGRY
                     VARFGDLQRDPATLVDAEELRRLREQARARRNDDGNDHDPSPLSK"
     gene            complement(2294..3754)
                     /gene="cls"
                     /locus_tag="QEL58_001797"
     CDS             complement(2294..3754)
                     /gene="cls"
                     /locus_tag="QEL58_001797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014645411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cardiolipin synthase"
                     /protein_id="HDS1676275.1"
                     /translation="MLALFDSLRHWLDGIAHLGTILAVAYLLYLFALAGWIMLQKREP
                     VATLSWILSLALLPYLGLFIYYLLGPQKVKRQRLRRGRARSGMEHYSDVCPPDADCTE
                     LAKIAQATTGLAPSSATEVTWLVDGAATYAALLEAVAQARDHVHLEYYIFNPDHAGTA
                     LRDALVERARAGVQVRLLLDAVGSSALPRRFLQPLLDAGGEAIWFHPRQLLKPFKRPW
                     LNLRTHRKLVIVDGRLAFTGGINITDDEDESRRADAYRDLHMRIRGHVVRSLQLVFAE
                     DWLYASGQDHSRFDIARLWPAEMPLRADGPINAQVLVSGPDSGWETIHRLHVAAIQEA
                     HERVWLVTPYFVPGEAARMALTSAALGGLDVRLLVPKMSDSWFVTQAARSYFDELLHA
                     GVKIYEYGPRMLHTKAFIADDDVCIVGSANFDHRSFRLNFELSMMISDRDRVAALAEL
                     LQGEFDRATRVHDQAGRSLWLHRLPEAFARLASPLL"
     gene            complement(3857..4270)
                     /locus_tag="QEL58_001798"
     CDS             complement(3857..4270)
                     /locus_tag="QEL58_001798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017155972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biopolymer transporter ExbD"
                     /protein_id="HDS1676276.1"
                     /translation="MAFSSGGGKGPMADINVTPLVDVMLVLLIIFIVTAPIMTYPIAV
                     DLPQRVLNPPPQLVEPPPPIELKIDASNQVSWNNSPINASELQQRMEQEVQRDPTNQP
                     ELRIDASPDSEYDVMAKVLAAAKNAQMKKIGFVQQ"
     gene            complement(4274..4699)
                     /locus_tag="QEL58_001799"
     CDS             complement(4274..4699)
                     /locus_tag="QEL58_001799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005912447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biopolymer transporter ExbD"
                     /protein_id="HDS1676277.1"
                     /translation="MAFSSGNSGGPMADINVTPLVDVMLVLLIIFIITAPLMSHKVKV
                     DLPEANLIQKPEDAEKRAGPITLAVKEDGSIYWNDEEINKQTLESRLATAAQQTPQPP
                     LNLRGDRTTKMRVINDLTKVAQEQGMLDVGFVATKEKGQ"
     gene            complement(4757..5518)
                     /gene="exbB"
                     /locus_tag="QEL58_001800"
     CDS             complement(4757..5518)
                     /gene="exbB"
                     /locus_tag="QEL58_001800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002805928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-system energizer ExbB"
                     /protein_id="HDS1676278.1"
                     /translation="MLQELFIAAAAGGNPSNALSQMGFEHLIHEMTTKPGDFAVSWVV
                     LLTLIVMSAMSWYWTVINIFRSVRLKSAADRVVSLFWDTPNAQDAIRAMEEQPASEPF
                     SKIALDAAQAAAHHQRAEGGATGGVGENLSRSEFVDRALRQAVTRESNKLQSGMTLLA
                     TVGATAPFVGLLGTVWGIYGALIKIGATGSASIDAVAGPVGEALIMTAIGLFVAIPAV
                     FAFNFFSKVNSATISKFDTFAHDLHDFFATGSRVR"
     gene            complement(5613..6257)
                     /locus_tag="QEL58_001801"
     CDS             complement(5613..6257)
                     /locus_tag="QEL58_001801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019184054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HDS1676279.1"
                     /translation="MTEQLVVHRYEQPDDKGLSWPRIVGIAFVIALHLAAFMMLLIPA
                     VAPKAVAEKERNVMVTIVDAPPPPPTDTPPPPVKNLSPPKPSPVPPPPQAPVVDVPEP
                     RPNDIVTPPSPPSPPSPPSTIEASVDISSKAMNPPRYPPAAFRAGIQGEVILIIDVDA
                     SGNVTNVTVEKSSRNRDLDRAAMEAARKWRFNAAESGGKKAAGRVRVPVNFALN"
     gene            complement(6401..7591)
                     /locus_tag="QEL58_001802"
     CDS             complement(6401..7591)
                     /locus_tag="QEL58_001802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010487420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HDS1676280.1"
                     /translation="MIFRNHKAVLSVLVATALTGAVVTDAFAQSSRSSERGNRGGSKQ
                     AKSEALYPNATREEPTVKASAKMGSKLQKMIDSYNKEKFPETRTQADAILADSASNEY
                     DKSLAAQLASQAAYQTDDTPAAIAYLKQVLQFNGLDNNGHFQSMLMLGQLQLQEDKTA
                     EGLATLDKYFAESKSTKPEELIAKGQALYQLERYQEAIPVLKQAIAGATEPKDNWNQL
                     LMAALSEAGQSGEAVKEAEALAAKNPNDKKTQLNLASMYMQADQMDKAAAVMDKLRSS
                     GQLTDEREYKQLYSIYANTEHKEKDVIAVINEGLQKGILKPDYQVYLALAQSYYYSDQ
                     VPQAIDAWQKAAPLSKDGETYLNLARVLHAEGRIPEAKQAAQQALAKGVKNQADAKKI
                     INLK"
     gene            complement(7724..8530)
                     /locus_tag="QEL58_001803"
     CDS             complement(7724..8530)
                     /locus_tag="QEL58_001803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014645409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HDS1676281.1"
                     /translation="MKQLLLALVITTLVSACATTTSPTGRRQMVGGVSQAQLDQLGAQ
                     AFAETKQKEKISTDGRQNGYVQCVVNALVAQLPPQYRGVRWETAVFVDKEPNAFALPG
                     GKVGVNTGIFTVAKNQDQLAAVIGHEIGHVIARHHEERITRQMGAQTGLAVLGALAGA
                     AYGEGAASTVNQLGGMGAQTAFLLPGSRTQESEADVIGQRLMAQAGFNPAQAVDLWQN
                     MMAASGGRSPQWLSTHPDPANRIQELRRDAPALTPVYQQAQAAGLRPKCG"
     gene            complement(8602..9447)
                     /locus_tag="QEL58_001804"
     CDS             complement(8602..9447)
                     /locus_tag="QEL58_001804"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012478629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane metalloprotease"
                     /protein_id="HDS1676282.1"
                     /translation="MSASAPVSAPPPIPPASAAPRAGSPLAGFFIDLGIAIVTLFSLS
                     LITGLFWGFYRAIVVGRANAEAQGGGLSPDAISAAVGQPGALAQILMALIATGGAALV
                     VYFWRRPATPDERSTSRQALRRPSTWGWTVLVAALIVIGSNGIAFLARQFGIEPVPTN
                     VELMQNAIARFPLFLVLFAVVLAPAYEELLFRRVLFGRLWKAGRPWLGIILSSLAFAL
                     VHEVPGLSKNSLLGMLQLWLVYGGMGAAFCWLYQRTGTLWAAITAHALNNAVALAAMV
                     FLGST"
     gene            complement(9515..11974)
                     /gene="gyrB"
                     /locus_tag="QEL58_001805"
     CDS             complement(9515..11974)
                     /gene="gyrB"
                     /locus_tag="QEL58_001805"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005912438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase (ATP-hydrolyzing) subunit B"
                     /protein_id="HDS1676283.1"
                     /translation="MSDEQNTPANNGNYDANSITALEGLEAVRKRPGMYIGDVHDGTG
                     LHHMVFEVVDNSIDEALAGHADHVAVTIHTDGSVSVSDNGRGIPTGKHEQMSAKLGRE
                     VSAAEVVMTVLHAGGKFDDNSYKVSGGLHGVGVSVVNALSQKLLVDVFQNGFHYQQEF
                     SNGAAVTPLAKLETTTKRGTTVRFWPSTVAFHDNVEFHYDILARRLRELSFLNSGVKI
                     VLADERGDGRRDDFHYEGGIRSFVEHLAQLKTPLHPNVISVTGEHNNIVVDVALQWTD
                     SYQETMYCFTNNIPQKDGGTHLAGFRGALTRVLNNYIEQNGIAKQAKINLTGDDMREG
                     MIAVLSVKVPDPSFSSQTKEKLVSSDVRPAVENAFGARLEEFLQENPNEAKAIAGKIV
                     DAARAREAARKARDLTRRKGALDIAGLPGKLADCQEKDPALSELFIVEGDSAGGSAKQ
                     GRNRKNQAVLPLRGKILNVERARFDRMLSSDQVGTLITALGTGIGRDEYNPDKLRYHK
                     IIIMTDADVDGAHIRTLLLTFFYRQMPELIERGYVYIGLPPLYKIKQGKQELYLKDDP
                     ALDSYLASSAVENAALVPAAGEPGIEGLALEKLLLAYAAALDSIERNAHRYDRNLLEA
                     LVDFVPMDMDSLRTAGEGEGLDALAKRLNQGSLGSPRFSLELQEANDERPAAVLVTRR
                     HMGEQHIQVLPMSAFESGELRAIHQASKLLHGLIREGATISRGAKSIEVDSFAKAQNW
                     LLEEAKRGRQIQRFKGLGEMNPEQLWDTTVNPETRRLLQVRIEDAVAADQIFSTLMGD
                     VVEPRRDFIEDNALKVANLDI"
     gene            complement(12087..13181)
                     /gene="recF"
                     /locus_tag="QEL58_001806"
     CDS             complement(12087..13181)
                     /gene="recF"
                     /locus_tag="QEL58_001806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012478628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA replication/repair protein RecF"
                     /protein_id="HDS1676284.1"
                     /translation="MQIRRLALHQLRRFSAVDLLPQPGLNLLTGDNGAGKTSVLEALH
                     LMAYGRSFRGRVRDGLVRQGQEALEIFVEWDEQRAHHPPHRRKAGLRHSGQDWKGRLD
                     GEDVAQLGNLCAALAVVTFEPGSHALVSGGGEPRRRFLDWGLFHVEPDFLSLWRRYSR
                     ALKQRNALLKQGGPSRMLDTWDHELAEAGEPLTSRRQHYLERLQQRTVSLAATLAPQL
                     GIQGLELSPGWRRHELPLADALLLARERDRQAGYTSVGPHRADWSVDFHSIPGRDALS
                     RGQAKLTALACLLAQAEDYAEQRGEWPVIALDDLASELDRTHQARVLQRLLDGPAQIF
                     ITATETPSALQDLADITRFHVEHAQIVAVP"
     gene            complement(14140..15240)
                     /gene="dnaN"
                     /locus_tag="QEL58_001807"
     CDS             complement(14140..15240)
                     /gene="dnaN"
                     /locus_tag="QEL58_001807"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006451791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit beta"
                     /protein_id="HDS1676285.1"
                     /translation="MRFTLQREAFLKPLAQVVNVVERRQTLPVLANFLVQVQNGQLSL
                     TGTDLEVEMVSRIAVEDAQDGETTIPARKLFEIIRALPDGSRITVSQTGDKITVQAGR
                     SRFTLATLPSNDFPSVDEVEATERVAIGEATLKELIERTAFAMAQQDVRYYLNGLLFD
                     LRGDALRTVATDGHRLALCETDLAKPSGSKRQIIVPRKGVTELQRLLESGDREIELEV
                     GRSHVRVKRDDVTFTSKLIDGRFPDYEAVIPIGADREVKVDREALRASLQRAAILSNE
                     KYRGIRVEVSPGNLKISAHNPEQEEAQEEIEADTTVSDLAIGFNVNYLLDALSALRDE
                     EVIIQLRDSNSSALVRESSSEKSRHVVMPLRL"
     gene            complement(15516..16847)
                     /gene="dnaA"
                     /locus_tag="QEL58_001808"
     CDS             complement(15516..16847)
                     /gene="dnaA"
                     /locus_tag="QEL58_001808"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011050021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosomal replication initiator protein DnaA"
                     /protein_id="HDS1676286.1"
                     /translation="MDAWSRSLERLEAEFPPEDVHTWLKPLQADLRVDSLVLYAPNAF
                     IVDQVRELYLARIRELLAHFAGFSDVFLEIGSRPRPVEAQNAPVSTPSAHVSSEPQVP
                     FAGNLDNHYTFANFVEGRSNQLGLAAAFQAAQKPGDRAHNPLLLYGGTGLGKTHLMFA
                     AGNAMRQANPGAKVLYLRSEQFFSAMIRALQEKTMDQFKRQFQQVDALLIDDIQFFAG
                     KDRTQEEFFHTFNALFDGKQQIILTCDRYPREVEGLEARLKSRLAWGLSVAIEPPDFE
                     TRAAIVLAKARERGAEIPDDVAFLIAKKMRSNVRDLEGALNTLTARANFTGRAITTEF
                     AQETLRDLLRAQQQAISIPNIQKTVADYYGLQIKDLLSKRRTRSLARPRQVAMALTKE
                     LTEHSLPEIGDAFAGRDHTTVLHACRQIRTLMETDGKLREDWDKLIRKLSE"
     gene            17103..17243
                     /gene="rpmH"
                     /locus_tag="QEL58_001809"
     CDS             17103..17243
                     /gene="rpmH"
                     /locus_tag="QEL58_001809"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006404565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L34"
                     /protein_id="HDS1676287.1"
                     /translation="MATKRTYQPSNLKRKRDHGFRARMKTADGRKILSRRRAKGRKVL
                     SA"
     gene            17249..17743
                     /locus_tag="QEL58_001810"
     CDS             17249..17743
                     /locus_tag="QEL58_001810"
                     /EC_number="3.1.26.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012481687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease P protein component"
                     /protein_id="HDS1676288.1"
                     /translation="MPHLAADAIPSTVNTADPRKRFPRSARVRTRAEYSTVFNGARRV
                     SDPLMTLHWLPADRPARLGLAVSRKVDPNAVGRNRIKRVLRDILRQTRTEIQPGDFVV
                     VARSAARSASNDEIRQAFLRLLRRLRALPTPGVDGTMPPPDGIATPSLTEPASRPGPA
                     EPVR"
     gene            17743..19458
                     /gene="yidC"
                     /locus_tag="QEL58_001811"
     CDS             17743..19458
                     /gene="yidC"
                     /locus_tag="QEL58_001811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019658795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertase YidC"
                     /protein_id="HDS1676289.1"
                     /translation="MNQTRVFLIFAWLMVAVLLWMEWSREKAAPTPAPTTTSAPAAAQ
                     SVPGATPGAIPSAQVPGAPGQAAVQAQASATPASQRVTVTTDVLRLVLDGGRVLDAEL
                     LQFPQTKDEGSPPVRLLTEDPAHPYSAISGWASEDKNTPVPGADGFKLVGDTNDFVLA
                     KGQNELQIPFVWTADNGVTIKRTLTVSRNEYAVRFKDEVSNTGTAPWNGYVYRTLDRT
                     PTILSRSMTNPDSFSFNGATWYDNDKKYQRRAFKDYLEDGTLNQNITGGWLAMLQHHF
                     FTAWIPQKDQTAHYVLSQVAGRDLIEARGPAFTVAPGQSTSTEARLWVGPKLVNLIAK
                     EDVPGLDRVVDYSRFSMMAVIGQGLFWVLNQVHKLVGNWGWAIVGLVVLLKLVLYPLS
                     AVQYKSGAKMRRFQPRIAQLKERYGDDRQKFQTAMMELYKKEKINPMGGCLPILIQMP
                     IFFALYWVLVESVELRQAPWLGWIQDLTARDPYFILPVINVAVMWFTQKLTPAPGMDP
                     MQQKMMQFMPLVFGVMMAFMPSGLVLYWVVNGGLGLLQQWWMTKRHGGDPVPATTAPA
                     PVKKK"
BASE COUNT         3350 a         6193 c         6385 g         3565 t
ORIGIN      
        1 caacgagccc tgcggcgaat ccttcttcgg cggcaatggc ttcaggaacc ggctgcaatc
       61 cagcttcggc caatggctgt tctgcgcatt gaagcccagc cgcttgcgcg ccagcttgaa
      121 gcggttgttc aacaggtccg catacacgcc ctgaccgcgc atgcgggtgc cgaactggct
      181 gtcgtagtcc ttgccaccgc gcagctgctg gatggtgctc atcacatgcg cggcgcgatc
      241 cggatgatgg gtatccagcc agtcgcggaa cagcggtgcc acttccagcg gcaggcgcag
      301 cagcacgtaa cccgcagtac tggcgccagc gtcatgcgcg gcctccagca cggcttccag
      361 ttcgctgtcg ttgatccatg gaatcaccgg cgccaccatc acaccgaccg gaatgccggc
      421 ctcatgcagg cgcttcatcg cgcgcagccg tgcatgcggt gccgatgcgc gcggttccag
      481 cttggccgag agatgcgggt ccagcgaggt caccgagaaa tgcacgctga ccaggttttc
      541 cgcggccagc ggcgcgagca gatcgatatc gcgctcgacc agcgcgttct tggtgatcaa
      601 cgagaacggg tgcctggttt ccagcatcac ttcgatcagc tggcgggtca gcttgaactt
      661 gcgctcgatc ggttggtaag cgtcggtgtt gatgcccagc gcgatcggct gcggcacgta
      721 acccggcttc gacagctcct tgcgcagcag ctgcggcgca ttggtcttgg cgaacagctt
      781 ggtctcgaaa tccaggcccg gcgacaggtt cagataggca tgcgaggggc gcgcaaagca
      841 gtacgagcag ccatgctcgc agccgcgata cggattcacc gactggctga agccgacatc
      901 cggcgagttg tttcgggtga tgatgctgcg tgcggtttcg gcgcgcacct cggtgcgcag
      961 gcgtggggcg aggaactctt cgctctcatc gaccgcccag ccatcatcca ccgcctcgct
     1021 gacggtgctt tcaaagcgcc cggcaaggtg ggacgtggaa cctcggccct tgatcgcaat
     1081 acccatggac gcagggtacg ccgcgaccgt ctcaacggct gcgacggccg cctgaagggt
     1141 tcagccccct tgtagagtcg agccatgctc gactccattt cccatccgtc ccggggcagt
     1201 cgagcatggc tcgactctgc tgggtaaggg tcagagcagc gccaggtacc cgcgcacggt
     1261 ggcatccagg ccgtcataca gcgcttcgcc gatcagcgcg tggccgatcg acacctccag
     1321 cacatccggc acgtgggcca ggaagtcgcg caggttgtcc tgcgacagat cgtggccagc
     1381 gttgacgccc aggccgacgg cctgcgctcg acgtgcggca gtggcgaaca gcgccagcat
     1441 cgcctcggcg tcgccggcgg cgtgtgcctc ggcgtagggg ccggtgtaca gctcgatgcg
     1501 gtctgcgccg acttcagctg cctgctccag cagtgggttg ccggcgtcga cgaacaggct
     1561 gacccggcaa cccattgctt tcagttcggc gaccagcggg cgcaggcgct cgccgtcccg
     1621 ctcgaagtcg aagccatggt cggaggtgat ctggccgtcg ccgtcgggca ccagggtggc
     1681 ctgtgccggg cgggtctgct cgcacagcgg cagcaacccc gggtaaccct cgcgtggcgg
     1741 agcgaacggg ttgccttcga tgttgaactc cacgccacgg gcgcgggtca gcgtggacag
     1801 ggccagcacg tcctcggcgg tgatatggcg gcggtccggc cgcgggtgca cggtgatgcc
     1861 atgcgcgccg gcatccaggc aggcctgggc ggcacgcacc acgtccggtt cggcgccgcc
     1921 acgcgagttg cgcaggacgg cgatcttgtt gacgttgacg ctgagctggg tcatggaacg
     1981 gaactacttg gaaagagggg acggatcgtg gtcgttgccg tcgtcgttgc ggcgggcccg
     2041 ggcctgttcg cgcaggcgcc gcagttcctc ggcatcgacc agggtggcag ggtcgcgctg
     2101 caggtcgcca aagcgggcca cgtagcggcc gcgtacccag gccagcagga aggcgagggc
     2161 agccagcagg cacagggtca tcagcccggc gctgggggtc ttcagcgcaa aggcgaaaca
     2221 gcccagcgcc agcagcaggt acaaccagta catagtcggg ctccccggat gatcggcgca
     2281 gtgtagcgct gcgtcagagc agcggcgagg ccagccgcgc gaacgcctcg ggcaggcggt
     2341 gcagccacag cgagcggccg gcctggtcgt gcacgcgggt ggcacggtcg aattcgccct
     2401 gcagcagctc ggccagggcg gcgacgcggt cacggtcgct gatcatcatc gacagctcga
     2461 agttcagccg gaagctgcgg tggtcgaagt tggcgctgcc gacgatgcag acatcgtcat
     2521 cggcgatgaa ggccttggtg tgcagcatgc gcgggccgta ctcgtagatc ttcacgccgg
     2581 catgcagcag ctcgtcgaag taggagcgcg cggcctgggt gacgaaccag gagtcactca
     2641 tcttcggcac cagcaggcgt acgtccaggc cgcccagcgc cgccgaggtc agcgccatgc
     2701 gggcggcctc gccgggtacg aagtagggcg tgaccagcca gacgcgttcg tgcgcctcct
     2761 ggatagcggc cacatgcagg cggtggatcg tttcccatcc cgagtcgggc ccggacacca
     2821 gcacctgggc gttgatgggt ccgtccgcgc gcagcggcat ttcggccggc cacaggcgcg
     2881 cgatatcgaa gcgcgaatgg tcctggccac tggcgtacag ccagtcctcg gcgaacacca
     2941 gctgcaggct gcgcaccacg tggccgcgga tgcgcatgtg caggtcacgg taggcgtcgg
     3001 ccctgcggct ctcgtcttcg tcgtcggtga tgttgatgcc gccggtgaag gccaggcggc
     3061 cgtccacgat caccagcttg cgatgggtgc gcaggttcaa ccagggccgc ttgaagggct
     3121 tcagcagttg ccgcggatgg aaccagatcg cttcgccgcc tgcatccagc aacggctgca
     3181 ggaagcggcg gggcagggcg gaagaaccca cggcatccag cagcaggcgt acctgcacac
     3241 cggcacgggc acgttcgacc agggcatcgc gcagcgcggt gccggcgtgg tccgggttga
     3301 agatgtagta ctccagatgc acgtggtcgc gcgcctgtgc gacggcttcc agcagggcag
     3361 cgtaggtggc ggcgccatcc accagccagg tcacttcggt ggcgctgctc ggtgccagcc
     3421 cggtggtggc ctgggcgatc ttggccagct cggtgcagtc ggcatcgggt gggcagacgt
     3481 cgctgtagtg ctccatgccc gaacgcgcac ggccacggcg caggcgctgc cgcttcacct
     3541 tctgcgggcc gagcaggtag tagatgaaga ggcccaggta cggcagcaac gccagcgaca
     3601 ggatccagct cagcgtcgcg acgggctcgc gcttctgcag catgatccag cccgccaggg
     3661 cgaacaggta cagcagataa gccaccgcca ggatggtgcc gaggtgggcg atgccgtcga
     3721 gccagtggcg cagggagtcg aagagggcga gcatccgccg atcatagcgg cccgggcggc
     3781 cagagataaa aaaagacgcc cctgtttcca ggggcgtctg cagtcgcgtc atgactgttg
     3841 tgttgcggcg tagcgattac tgctgcacaa aaccgatctt cttcatctga gcattcttcg
     3901 cggcggccag gaccttggcc atcacgtcgt actcggaatc cgggctggcg tcgatgcgca
     3961 gttccggctg gttggtcggg tcacgctgga cctcctgctc catccgctgc tgcagctcgc
     4021 tcgcattgat cgggctgttg ttccacgaga cctggttgct ggcgtcgatc ttcagttcga
     4081 tcggcggcgg cggttcgacc agctgcggcg gtgggttgag cacgcgctgc ggcaggtcca
     4141 cggcgatcgg gtacgtcatg atcggcgcgg tcacgatgaa gatgatcagc agaaccagca
     4201 tcacgtccac gaggggcgtg acgttgatgt ctgccatggg gcccttgcca ccaccactac
     4261 tgaatgccat ggcttattgc cccttttctt tggtcgcgac gaagccgacg tccagcatgc
     4321 cctgctcctg cgcgaccttg gtcaggtcgt tgatgacgcg catcttggtg gtgcggtcac
     4381 cacgcaggtt cagcggcggc tgcggggtct gctgggcggc ggtcgccaag cgcgactcga
     4441 gagtctgctt gttgatttct tcgtcgttcc agtagatcga gccgtcttcc ttgactgcca
     4501 gggtgatcgg gccggcacgc ttttcagcgt cttccggctt ctggatcagg ttggcttccg
     4561 gcagatccac cttgaccttg tgggacatca ggggcgccgt gatgatgaag atgatcagca
     4621 gcaccagcat cacgtccacg aggggcgtaa cgttgatgtc ggccatgggg ccgccgctgt
     4681 taccactact gaaagccata acgggctccg tctagatcgt gttgactacg ttctcgctgg
     4741 gtacagcgcg ccggaattag cggacgcgcg aaccggtggc gaagaagtcg tgcaggtcgt
     4801 gcgcgaaggt atcgaacttg ctgatggtcg cgctgttgac cttgctgaag aagttgaagg
     4861 cgaacacggc cgggattgcg acgaacagac cgatcgcggt catgatcagc gcttcaccca
     4921 ccgggccggc aacggcgtcg atcgaagcgg agccggtggc accgatcttg atcagcgcgc
     4981 cgtagatgcc ccacacggta cccagcagac cgacgaacgg agcggtcgca ccgacggtcg
     5041 ccagcagggt catgcccgac tgcagcttgt tgctttcgcg ggtgacggcc tggcgcaggg
     5101 cgcggtcaac gaactccgaa cggctcaggt tctcaccgac gccgccggta gcaccgcctt
     5161 cagcgcgctg gtggtgggca gctgcctggg cagcgtccag ggcgatcttc gagaacggct
     5221 cggatgccgg ctgttcttcc atcgcacgga tggcgtcctg tgcgttcggg gtgtcccaga
     5281 acaggctgac gacgcgatca gcggcgctct tcagacggac cgaacggaag atgttgatga
     5341 cggtccagta ccaggacatg gccgacatca cgatcagggt cagcagcacg acccaggaaa
     5401 ccgcgaaatc acccggcttg gtggtcattt cgtggatcag gtgctcgaag cccatctgcg
     5461 acagggcgtt ggacggattg cccccggcag cagcggcgat gaaaagttcc tgcagcatga
     5521 cgcttacctt tgttgtgtgt ggtgataaag ggtgtagcta agctaaacaa tcgaaccgtg
     5581 ggcggggggt ggccaggcgg ccacccggcc catcagttca gcgcaaagtt gaccgggacg
     5641 cgaacgcgac ctgccgcctt cttaccgcca gattcagcgg cgttgaagcg ccacttgcga
     5701 gctgcttcca tcgcagcacg gtccaggtcg cggttacggc tggacttttc caccgtgaca
     5761 ttggtgacgt tgccgctggc atcgacatca atgatcagga tcacttcgcc ctggataccg
     5821 gcgcggaagg ctgccggcgg gtagcgcggc ggattcatgg ccttcgacga gatgtccacg
     5881 ctggcctcga tcgtgctcgg cggtgacggc ggcgacggcg gcgacggcgg ggtgacgatg
     5941 tcgttcgggc gcggttccgg cacgtccacg accggcgcct gcggcggcgg cgggaccggc
     6001 gacggcttcg gcggcgacag attcttcacc ggcggcggcg gagtatcggt cggcggcggc
     6061 ggcggcgcat cgacgatggt caccatgacg ttgcgctcct tctccgcaac ggccttggga
     6121 gccacggcgg gaatgaggag catcatgaag gcggccagat gcagggcaat tacaaacgcg
     6181 atgccgacga tgcgaggcca gctcagcccc ttgtcatcgg gttgttcgta ccggtgaacg
     6241 actagttgtt ccgtcatgcg ccaagagctc aatagtgggg ccgggatgcc gggggcggaa
     6301 tccctgatca gcggtgcatg acaccgcagg aacctccaag cttataccaa tcctgagcgc
     6361 ctgcgcatca actgagcagg cattcaggcg ttattcctac ttacttcagg ttgatgattt
     6421 ttttggcatc agcctggttc ttcacaccct tcgccagcgc ctgctgggcg gcctgcttgg
     6481 cctccgggat gcgaccttcg gcatgcagga cgcgtgccag gttcaggtag gtctcaccgt
     6541 ccttggagag cggggcagcc ttctgccacg catcgatcgc ctgcggcacc tggtcggagt
     6601 agtagtagga ctgggccagc gccaggtaga cctggtaatc cggcttcagg atgcccttct
     6661 gcaacccttc gttgatgacc gcgatgacgt ccttttcctt gtgctcggtg ttggcataga
     6721 tcgagtacag ctgcttgtac tcgcgctcgt cggtgagctg gccgctgctg cgcagcttgt
     6781 ccatcaccgc agccgccttg tccatctggt cggcctgcat gtacatgctg gccaggttca
     6841 gctgggtctt cttgtcgttc gggttcttgg ccgccagtgc ttcggcttcc ttgaccgcct
     6901 caccggactg gccggcttcg gacagggccg ccatcagcag ctggttccag ttgtccttcg
     6961 gctcggtggc gccggcgatg gcctgcttca gcaccgggat cgcttcctgg tagcgctcca
     7021 gctggtacag cgcctggccc ttggcgatca gctcttccgg cttggtcgac ttgctctcgg
     7081 cgaagtactt gtcgagggtg gccaggcctt cggcggtctt gtcttcctgc agctgcagct
     7141 ggcccagcat cagcatcgac tggaagtggc cgttgttgtc caggccgttg aactgcagga
     7201 cctgcttcag gtaggcgatc gccgccgggg tgtcgtcggt ctggtaggcg gcctgcgagg
     7261 ccagctgcgc ggccagcgac ttgtcgtact cgttcgaggc actgtcggcc aggatcgcgt
     7321 cagcctgcgt gcgcgtctcc gggaactttt ccttgttgta gctgtcgatc attttctgca
     7381 gcttgctgcc catcttggcc gaggccttga cggtcggctc ctcgcgggtc gcgttcgggt
     7441 acagcgcctc ggacttggcc tgcttgctgc cgccacggtt gccacgctcg gacgaacgcg
     7501 aggactgcgc gaaggcatcg gtgaccacgg cgccggtcag ggcggtcgcg acgaggacgg
     7561 aaagcacagc tttgtggtta cggaaaatca tcgttcacct cgatcgaacc gccggttagc
     7621 ggcaaagtcg gactgtcaga aaaatctgag ccgccaaacg tatcagaaac agatggcgtg
     7681 agaaatcgtt ttatgtgctg caatacagca tagaagtgcg cactcatccg cactttggcc
     7741 gcagtccagc cgcctgcgcc tgctggtaga ccggcgtcag cgccggtgca tcgcgtcgca
     7801 gctcctggat ccggttggcc gggtcggggt gggtggacag ccattgcggg ctgcgaccgc
     7861 cactggcggc catcatgttc tgccacagat cgaccgcctg cgccgggttg aaaccggcct
     7921 gggccatcag ccgctggccg atcacgtcgg cctcgctctc ctgggtgcgc gagcccggca
     7981 gcaggaaggc ggtctgggcg cccatcccac ccagctggtt cacggtgctg gccgcgccct
     8041 cgccgtaggc ggccccggcc agtgcgccga gcacggccag gccggtctgc gcgcccatct
     8101 ggcgggtgat gcgctcttcg tggtggcgcg cgatgacgtg gccgatttca tggccgatca
     8161 cggcagccag ctggtcctgg ttcttcgcca cggtgaagat gcccgtgttc acgcccacct
     8221 tgccaccggg cagtgcgaac gcattgggtt ccttgtcgac gaacaccgcg gtctcccacc
     8281 gtacgccacg gtattgaggc ggcagctgcg cgaccagcgc gttgaccacg cactgcacgt
     8341 aaccgttctg gcggccgtcg gtgctgatct tttccttctg cttggtttcg gcaaacgcct
     8401 gtgcgcccag ctggtccagc tgggcctggg agacgccgcc caccatctgc cggcgcccgg
     8461 tcggggacgt ggtggtcgcg caggcgctga ccagggtggt gatgacaagg gccagcagca
     8521 gttgtttcat ggaagctccc ccgtgttcat gtccgcagtg tgtagcgtac cggcttaatc
     8581 tttcgtcaag cggacacggc gttacgttga ccccaggaac accatcgcgg caagcgcaac
     8641 ggcgttgttc aatgcatgtg cggtgatggc cgcccacaac gtgccggttc gctgatagag
     8701 ccaacagaac gcggcgccca tgcctccata caccagccac aactggagca tgcccagcag
     8761 ggagttcttg ctcagacccg gcacttcgtg cacgagggca aatgccaggc tgctgaggat
     8821 gatgcccagc cagggacgtc ccgccttcca caggcgcccg aacaacacgc ggcggaacag
     8881 cagctcttcg taggccggcg ccagcaccac ggcgaacaac acgaggaaca gcgggaaacg
     8941 cgcaatcgcg ttctgcatca gttccacgtt ggtcggcacc ggttcgatgc cgaactgcct
     9001 ggccaggaag gcgatgccat tgctgccgat cacgatcagc gcagccacca gcacggtcca
     9061 gccccaggtc gagggccgcc gcagcgcctg gcgggaagtg gagcgctcgt ccggcgtggc
     9121 cggacgccgc cagaagtaca ccaccagtgc ggccccgccg gtggcgatca acgccatcag
     9181 gatctgcgcc agtgcacccg gctggccaac cgccgcgctg atcgcgtcgg gcgacagccc
     9241 gccaccctgg gcctccgcat tggcacggcc gaccacgatc gcgcggtaga acccccagaa
     9301 cagcccggtg atcaggctca ggctgaacag ggtgacgatg gcgatgccca ggtcgatgaa
     9361 gaaacccgcc aacggggaac cggcgcgcgg cgcggccgag gccggcggaa tcgggggcgg
     9421 ggcggaaacc ggggcggaag cggacatcag gtacctgcgt tcaagggtcg aaggccggcg
     9481 cgcctccccg cgcaccggcc gtgtcccgat tgtgtcagat atccaggttg gcgaccttca
     9541 gcgcgttgtc ctcgatgaaa tcgcgacgcg gttcaaccac atcgcccatc agggtgctga
     9601 agatctggtc ggcggcaacg gcatcttcga tgcgcacctg cagcagccga cgggtttccg
     9661 gattcacggt ggtgtcccac agctgttccg gattcatttc acccagaccc ttgaatcgct
     9721 ggatctggcg gccgcgcttg gcctcttcga gcagccagtt ctgcgccttg gcaaagctgt
     9781 ccacttcgat cgacttggcg ccgcgggaaa tggttgcacc ttcgcggatc aggccatgca
     9841 gcagcttgga ggcctggtgg atcgcgcgca gttcgccgct ttcgaaggcc gacatcggca
     9901 acacctggat gtgctgctcg cccatatggc gacgggtcac cagcacggcg gccgggcgct
     9961 cgtcgttggc ttcctgcagt tccaggctga agcgcgggct gcccaggctg ccctggttga
    10021 ggcgcttggc cagtgcatcc aggccttcgc cttcgccggc agtgcgcagg ctgtccatgt
    10081 ccatcggcac gaaatcgacc agcgcctcga gcaggttgcg gtcgtagcgg tgcgcgttgc
    10141 gttcgatcga atccagtgca gcagcatagg ccagcagcag cttttccagc gccaggcctt
    10201 cgatgccggg ttcgccagcg gccggcacca gcgccgcgtt ttccaccgcg ctgctggcca
    10261 ggtagctgtc cagcgccggg tcgtccttca gatacagctc ctgcttgccc tgcttgatct
    10321 tgtacagcgg cggcaggccg atgtagacat aaccgcgctc gatcagctcc ggcatctgac
    10381 ggtagaagaa cgtcagcagc agggtgcgga tgtgcgcgcc gtcgacgtcg gcgtcggtca
    10441 tgatgatgat cttgtggtag cgcagcttgt ccgggttgta ctcgtcacgg ccgatgccgg
    10501 tgcccagcgc ggtgatcagc gtaccgacct ggtccgacga cagcatgcgg tcgaagcgcg
    10561 cgcgttccac gttgaggatc ttgccgcgca gcggcagcac cgcctggttc ttgcggttgc
    10621 gaccctgctt ggccgagcca cctgccgagt caccctcgac gatgaacagc tcggacagcg
    10681 ccggatcctt ttcctggcag tcggccagct tgcccggcag gccggcaata tccagcgcgc
    10741 ccttgcggcg ggtcaggtcg cgggccttgc gcgcggcttc gcgtgcacgc gcggcatcga
    10801 cgatcttgcc ggcgatggcc ttggcttcgt tcgggttttc ctgcaggaac tcttccaggc
    10861 gcgcaccaaa ggcgttttcc accgccgggc gcacgtcgga gctgaccagc ttttccttgg
    10921 tctggctgga gaagctcgga tccggcacct tcaccgacag caccgcgatc atgccttcgc
    10981 gcatgtcgtc gccggtcagg ttgatcttgg cctgcttggc gatgccgttc tgctcgatgt
    11041 agttgttgag cacgcgggtc agcgcaccac ggaagccggc gaggtgggta ccgccgtcct
    11101 tctgcgggat gttgttggtg aagcagtaca tcgtctcctg gtaggagtcg gtccactgca
    11161 gcgccacgtc caccacgatg ttgttgtgct cgccggtgac cgagatgacg ttcgggtgca
    11221 gcggggtctt cagctgcgcc agatgctcca cgaagctgcg gatgccgcct tcgtagtgga
    11281 agtcgtcgcg acgaccgtcg ccgcgctcat cggcgagcac gatcttgacg ccggagttga
    11341 ggaacgacag ttcgcgcagg cgacgggcca ggatgtcgta gtggaattcc acgttgtcgt
    11401 ggaaggccac agtcgacggc cagaagcgca cggtggtgcc acgcttggtg gtggtttcca
    11461 gcttggccag cggagtcacg gccgcaccgt tgctgaattc ctgctggtag tggaagccgt
    11521 tctggaacac atccaccagc agcttctgcg acagcgcgtt gaccacgctg acacccacgc
    11581 cgtgcaggcc gccggacacc ttgtagctgt tgtcgtcgaa cttgccgcct gcgtgcagca
    11641 cggtcatcac gacttcggct gccgaaacct cacggcccag cttggcgctc atctgctcat
    11701 gcttgccggt cgggataccg cgaccgttat cggacaccga gaccgagcca tcggtgtgga
    11761 tcgtcactgc cacgtggtcg gcgtggccgg ccaacgcttc gtcgatcgag ttgtcgacga
    11821 cctcgaacac catgtggtgc aggccggtgc cgtcatgcac atcaccgatg tacatgccgg
    11881 gacgcttgcg gacagcctcc aggccttcca gggcggtaat gctgttggcg tcgtaattgc
    11941 cgttgtttgc cggggtgttc tgttcgtcgc tcattgcgct tgccgtaggc tccgcaggtc
    12001 ggtcaccgcg tggagcgatg cgccgagaat gaaaggattc caacccgaat tataccagcc
    12061 ggggtcgagc ggccctggtg tgaccactat ggcacagcca cgatctgtgc atgttccacg
    12121 tggaaccggg tgatgtcggc cagatcctgc agtgccgacg gggtttcggt ggcggtaatg
    12181 aagatctgcg ccgggccatc aagcaggcgc tgcagcacac gcgcctggtg ggtgcggtcc
    12241 agctccgagg ccaggtcgtc gagtgcgatc accggccact cgccgcgctg ttccgcatag
    12301 tcctcggcct gcgccagcag gcacgccagc gcggtcagct tggcctggcc acgtgacagt
    12361 gcgtcgcgac cgggaatgct gtggaaatcc acgctccagt ccgcgcggtg cgggcccacc
    12421 gaggtgtagc cggcctggcg gtcccgctcc cgggccagaa gcagggcgtc ggccagagga
    12481 agttcgtggc gacgccagcc tgggctcagt tccagcccct ggattccgag ttgcggagca
    12541 agggtggctg ccaacgacac cgtgcgctgc tgcagtctct ccaggtagtg ctggcggcgg
    12601 ctggtcagcg gttctcccgc ctcggccagc tcgtgatccc aggtatcgag catccgcgac
    12661 ggtccaccct gcttgagcag ggcattgcgc tgcttcagtg cccgcgagta gcgacgccac
    12721 aaggacagaa aatcaggttc cacgtggaac aggccccaat cgaggaagcg acggcggggt
    12781 tcaccaccac cactcaccag cgcatggctg cctggctcga aggtcaccac cgccagggcg
    12841 gcgcagagat tgcccagctg cgcgacgtcc tctccgtcca atcggccttt ccagtcctgg
    12901 ccactgtggc gcaggcccgc tttgcggcga tgcggcgggt gatgggcgcg ctgctcgtcc
    12961 cattccacga agatttccag cgcctcctgg ccctgacgga ccaggccatc gcgaacccgg
    13021 ccgcgaaagc tgcggccata agccatcagg tgcagcgcct cgagcacgct ggtcttgccc
    13081 gcaccgttgt cgccggtcag caggttcaag cccggctgcg gcaacaggtc caccgcactg
    13141 aagcgacgca gttggtgcag ggcgaggcgg cggatctgca tggggcgcga aggaccatcc
    13201 gcactgggcg gtagaagggt gggtaatcca tcagcttact gcatcggtca agccggtcgt
    13261 gttgcgggca ccatccgccc cggaacgcga cggctgccgg ccactgctcg ctcgtttcac
    13321 gtggtgtgcg gctcatgcct gcggccccgc cgcaatcggg aagggcgcga attccttcaa
    13381 atctgggcac ggcaccactc cgtaggccca cagatttcag cagtttcacc gccatccagt
    13441 gggaatcgcg ggatgcctca acggcgatgc cagcggcaaa ccacccggat tccttcaatt
    13501 ctgcggtcca ggaccctgga gggttccaca gaattcaacg aattcagacc tacagttcca
    13561 cgctatccac agcgggacgg tatgacttat acacaaggta tgggcaatct gtggataaaa
    13621 aagccctttt accgtgccgg cgaaactatc cacaggttcc cccccagccc gaaggccctc
    13681 tatacagggg gtttcagcct cataaacatt tttaaaatca aacagataag gcgtttttcc
    13741 acgaaatctg gccctaccat caccaccatg ctttagattt atacccagat ttagaagcaa
    13801 ggcccagccc gatctgcctc gaacgggccc tgtggacagt ggcgtctgca gaatcaggag
    13861 tcattgcttc gcagacgatc gcgaggcctg cttcacctgg gacaagaagg ccattcgact
    13921 gagcatgacg atccagcagc cggaatcctg attgcctcca atccgagagc ccactcgcac
    13981 cgtcaatgtt ggaacccaac gacgggacag cagaggtccc cgttccaagg cgtcgaatca
    14041 gcgcctgtag caggacgaac actcatgctc cacgtggaac aaaaaaacgc ccgggaaaat
    14101 cccgggcgtc attcggttcc acgtggaaca gcgctggtgt cagagacgca gcggcatcac
    14161 cacatgacgc gacttctcgc tgctggattc acgcaccagc gccgaggagt tggagtcgcg
    14221 cagctggatg atgacttcct cgtcgcgcag cgccgagagg gcatccagca ggtagttcac
    14281 gttgaagccg atggccagat cgctgaccgt ggtgtcggct tcgatctctt cctgggcttc
    14341 ttcctgttcc gggttgtgcg cgctgatctt caggttgccc ggcgagactt ccacgcggat
    14401 accgcggtac ttctcgttgg acaggatcgc ggcacgctgc agcgaggcac gcagcgcttc
    14461 acggtcaacc ttcacttcgc ggtcggcgcc gatcgggatg acagcctcgt aatccgggaa
    14521 acggccgtcg atcagcttcg aggtgaaagt gacatcgtcg cgcttgacgc gcacgtggct
    14581 gcggccgact tccagctcga tctcgcgatc accgctttcc agcaggcgct gcagttcggt
    14641 cacgcccttg cgcggcacga tgatctggcg cttggacccg ctgggcttgg ccagatcggt
    14701 ttcacacagc gccaggcgat gaccgtccgt ggcgacggta cgcagggcgt caccgcgcag
    14761 atcgaacagc aggccgttga ggtagtagcg cacatcctgc tgggccatcg cgaacgcggt
    14821 gcgttcgatc agctccttca gggtcgcttc gccgatggcg acgcgctcgg tggcttccac
    14881 ttcgtccacc gacgggaagt cgttggaggg cagggttgcc agggtgaagc gactgcgacc
    14941 ggcctgcacg gtgatcttgt caccggtctg cgagacggtg atccggctgc catcgggcag
    15001 ggcgcggatg atctcgaaca gcttgcgggc gggaatggtg gtttcgccgt cctgggcatc
    15061 ttcaaccgcg atccgcgaca ccatctccac ttccaggtcg gtaccggtca gcgacagctg
    15121 gccgttctgc acctggacca ggaaattggc cagaaccgga agggtctggc ggcgttcgac
    15181 cacgttgacg acctgtgcca acggcttgag aaaggcttcg cgctgcagtg tgaaacgcat
    15241 gtggttccgt gcccctatgc tttaaaaaat gtggaataaa tcaaaagctt ggtggtgctg
    15301 gtagagacag aatcgctgga aaacaacgct aagtctttgt aaataaaaga atttcagacc
    15361 tcgaaaccct ctgtattacc gccccccagg gggtggggaa agctgtggat agaatcggcg
    15421 cgatttcaga cgccattttt atccacaacg tgtcccgcgc ttgctaccgg attctgcacc
    15481 gttttgtgcg atgacgcctc atcggcatcc gtgcatcatt cgctcagctt ccggatcagc
    15541 ttgtcccagt cctcgcggag cttgccgtcg gtttccatca gggtccggat ctggcggcag
    15601 gcatgcagca ccgtggtgtg atcgcgaccg gcaaaggcat cgccgatctc gggcaggctg
    15661 tgctcggtca gttccttggt cagggccatg gcgacctggc gcgggcgggc cagcgagcgg
    15721 gtccgacgct tggacagcag atccttgatc tgcaggccgt agtagtcggc aacggttttc
    15781 tggatgttgg gaatgctgat cgcctgctgc tgggcacgca gcaggtcgcg cagggtttcc
    15841 tgggcgaatt cggtggtgat cgcgcggccg gtgaaattgg cgcgggcggt cagggtattg
    15901 agcgcgcctt cgaggtcgcg cacgttggag cgcatcttct tggcgatcag gaacgcaacg
    15961 tcatcgggaa tctcggcacc gcgttcgcgc gccttggcca gcacgatcgc ggcacgggtc
    16021 tcgaagtccg gcggttcgat cgcgaccgac aagccccagg caagccgcga cttcaggcgc
    16081 gcttccaggc cttcgacttc gcgcggatag cggtcgcagg tcaggatgat ctgctgcttg
    16141 ccatcgaaca gcgcgttgaa ggtgtggaag aactcttcct gggtgcggtc cttgccggcg
    16201 aagaactgga tgtcatcgat cagcagcgcg tccacctgct ggaactggcg cttgaactga
    16261 tccatggtct tttcctgcag ggcccggatc atcgcgctga agaactgctc cgaacgcagg
    16321 tacagcacct tcgcccctgg gttggcctgg cgcatggcgt tgccggcggc gaacatcagg
    16381 tgggtcttgc ccaggccggt gcctccgtac agcagcagcg ggttgtgcgc acggtcgccc
    16441 ggcttctgcg ccgcctggaa ggcagcggcc aggcccaact ggttgctgcg gccttcgacg
    16501 aagttggcga aggtgtagtg gttgtccagg ttgccggcga acggcacctg cggttcgctg
    16561 gagacgtgcg ccgacggcgt ggaaaccggc gcgttctgcg cctccaccgg gcgtgggcgc
    16621 gagccgattt caagaaaaac gtcgctgaaa ccggcgaaat gagccagcag ttcgcggatc
    16681 cgggccaggt acagctcgcg gacctggtcg acgatgaagg cattcggtgc atacagcacc
    16741 aggctgtcca cgcgcagatc ggcctgcagc ggcttcaacc aggtatgaac gtcttccggc
    16801 gggaactccg cttcgaggcg ctcgagacta cgggaccaag catccatcag caataatcgt
    16861 ccggtggccg gggcgtggac gcgacaaggc gcccaaacac aggccggaaa ggggggaaat
    16921 ggatggctca gactaccacc gagcgcccgc cttcggaatg cttgtcccct acttattcac
    16981 aaaaacatcc acagctattg cacagggcag tgaattggcg tagctgccag ggcttgactt
    17041 gggccggggt acctctctag aatttccggt tctttccgtc ccattcatac gagaggcccc
    17101 caatggccac gaagcgcacc taccagccca gcaacctcaa gcgtaagcgc gaccacggct
    17161 tccgtgcccg tatgaagacc gctgacggcc gcaagatcct gtcgcgtcgc cgcgccaagg
    17221 gccgcaaagt cctgagcgcc tgattgccat gccgcacctc gcggcagacg caatcccttc
    17281 gacagtgaat actgcagacc cgcgcaagcg attccctcgc tctgcgcggg ttcgcacgcg
    17341 tgccgaatac tcaacggtct tcaacggcgc ccgccgtgtg tccgatccgc tgatgaccct
    17401 gcactggctg ccggctgacc ggccggccag gctgggtctg gcggtttcac gcaaggttga
    17461 tccgaacgcc gtcgggcgta accggatcaa gcgcgtcctg cgcgacatcc tgcgtcagac
    17521 acgtaccgaa atccagccag gcgacttcgt cgtcgtggct cgtagtgctg cgcgttccgc
    17581 cagcaacgac gagatccgcc aggccttcct gcgcctgctg cgtcgcctgc gtgcattgcc
    17641 cacgccgggc gtggacggca caatgccgcc gcctgatggc atcgcaactc cttctttgac
    17701 cgagccggca tcgcgtcccg gccccgccga gcctgtccgc tgatgaacca gacccgcgta
    17761 ttcctcattt ttgcctggct gatggtggcc gtgctgctgt ggatggagtg gagccgtgaa
    17821 aaggctgctc cgaccccggc cccgacgacc acgtcggccc cggccgccgc acagagcgtt
    17881 ccgggtgcaa ccccgggcgc catccccagt gcccaggtcc cgggtgcccc cggccaggcc
    17941 gccgtgcagg cccaggccag tgccaccccg gccagccagc gcgtgaccgt caccaccgac
    18001 gtgctgcgcc tggtgctcga tggcggccgc gtgctcgatg ccgagctgct gcagttcccg
    18061 cagaccaagg acgaaggcag cccgccggtg cgcctgctga ccgaagatcc cgcgcatccg
    18121 tacagcgcga tcagcggctg ggccagcgag gacaagaaca ctccggtccc gggcgctgac
    18181 ggcttcaagc tggtcggtga caccaacgac ttcgtgttgg ccaagggcca gaacgagctg
    18241 cagatcccgt tcgtgtggac cgccgacaac ggcgtgacca tcaagcgcac cctgaccgtc
    18301 tcgcgcaacg agtacgccgt gcgcttcaag gacgaagtca gcaacaccgg caccgcgccg
    18361 tggaacggtt acgtctaccg caccctggac cgcaccccga cgatcctgtc gcggagcatg
    18421 accaatccgg actccttcag cttcaacggc gccacctggt acgacaacga caagaagtac
    18481 cagcgtcgtg cgttcaagga ctacctggaa gacggcacgc tgaaccagaa catcaccggc
    18541 ggctggctgg cgatgctgca gcaccatttc ttcaccgcct ggatcccgca gaaggaccag
    18601 accgcgcact acgtgctgtc gcaggtggcc ggtcgtgacc tgatcgaagc gcgtggcccg
    18661 gccttcaccg tggccccggg ccagtccacc agcaccgagg cccgcctgtg ggtcggcccg
    18721 aagctggtca acctgatcgc caaggaagac gtgccgggcc tggaccgcgt ggtcgactac
    18781 agccgcttct cgatgatggc ggtgatcggc cagggcctgt tctgggtgct gaaccaggtg
    18841 cacaagctgg tcggcaactg gggctgggcg attgtcggcc tggtggtgct gctgaagctg
    18901 gtgctgtatc cgttgtcggc cgtgcagtac aagagcggcg ccaagatgcg tcgcttccag
    18961 ccgcgcatcg cgcagctgaa ggaacgctat ggcgacgacc gccagaagtt ccagaccgcg
    19021 atgatggagc tgtacaagaa ggaaaagatc aatccgatgg gcggctgcct gccgatcctc
    19081 atccagatgc cgatcttctt cgccctgtac tgggtgctgg tcgagtcggt cgagctgcgc
    19141 caggcgccgt ggctgggctg gatccaggac ctgaccgcac gcgacccgta cttcatcctg
    19201 ccggtcatca acgtggcggt gatgtggttc acccagaagc tgaccccggc accgggcatg
    19261 gacccgatgc agcagaagat gatgcagttc atgccgctgg tgttcggcgt catgatggcc
    19321 ttcatgccgt ccggcctggt gctgtactgg gtggtcaacg gcggcctggg cctgctgcag
    19381 cagtggtgga tgaccaagcg ccatggcggc gatccggtcc cggccaccac tgccccggcc
    19441 ccggtcaaga agaagtaacg ccgacctgta gagtcgactg ttagtcgact ggc
//
LOCUS       DAOKIP010000060        19094 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.060,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000060 DAOKIP010000000
VERSION     DAOKIP010000060.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 19094)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19094)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19094
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.060"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            285..734
                     /gene="aroQ"
                     /locus_tag="QEL58_001812"
     CDS             285..734
                     /gene="aroQ"
                     /locus_tag="QEL58_001812"
                     /EC_number="4.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019183533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II 3-dehydroquinate dehydratase"
                     /protein_id="HDS1676290.1"
                     /translation="MAKLLVLHGPNLNLLGTREPEVYGHTTLADIDQALAAQASAAGH
                     AVESLQSNAEHVLVDRVQAARNDGTAFILINPAAFTHTSVALRDALAAVAVPFIEIHL
                     SNPHTREPFRQHSYFSDKAVGVVCGFGADSYRYAMDAALLRVQAAGA"
     gene            734..1156
                     /locus_tag="QEL58_001813"
     CDS             734..1156
                     /locus_tag="QEL58_001813"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012512269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1311 domain-containing protein"
                     /protein_id="HDS1676291.1"
                     /translation="MMLPRVLASLVLCASLCGVAHAGDRSAEGIDCAQATGGYERDMC
                     DSDRLDDVDRELNAVYAQALDELKAQAADGSCSRCAAAEQQLVKAQRIWITLRDADCE
                     AVYAFNADGTSRNPAKMQCLITQTRDRTRQLREFYELL"
     gene            1210..1689
                     /locus_tag="QEL58_001814"
     CDS             1210..1689
                     /locus_tag="QEL58_001814"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017155928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxyl carrier
                     protein"
                     /protein_id="HDS1676292.1"
                     /translation="MDLRKIKKLIDLLEESNLAEIEIKEGEESVRLSRAPVAGYAAPM
                     PAPVYAAPAAPAAQAMPMQSPTEASTGGTAKPGPALPEGHVLRSPMVGTFYASSAPDK
                     PAFVSVGQQVKEGETLAIIEAMKMFNPIEADKSGTIVAILGENGQPVEFDQPLFVIG"
     gene            1700..3067
                     /gene="accC"
                     /locus_tag="QEL58_001815"
     CDS             1700..3067
                     /gene="accC"
                     /locus_tag="QEL58_001815"
                     /EC_number="6.3.4.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxylase
                     subunit"
                     /protein_id="HDS1676293.1"
                     /translation="MLDKVVIANRGEIALRILRACHTLGIRTVAVHSTVDRNLKHVAM
                     ADESVCIGPAPSPQSYLNIPALIAAAEVTDAQAIHPGYGFLSENADFAERVEESGFIF
                     IGPKADTIRMMGDKVEAIRAMKSAGVPCVPGSGGPLGEDIVANTKIAREIGYPVIIKA
                     AGGGGGRGMRVVHAEASLKTSIETTKSEAKAAFGNGEVYMEKFLENPRHVEIQVLADG
                     QGNAIHLGERDCSMQRRHQKVVEEAPAPGISAEQREQIGKVCTEACVRIGYRGAGTFE
                     FLYEDGRFYFIEMNTRIQVEHPVTEMVTGIDLVAEQLKIAAGQKLSIKQSDVVLTGHA
                     IECRINAEDAETFVPSPGTITGFHPPGGPGVRVDTHIYSGYRVPSNYDSMIGKLIVHG
                     PDRETAIARMRVALSEMVVDGIKTNIALQQRIMRDKGFQAGGQNIHYLEKRLAERKNK
                     PIALT"
     gene            complement(3165..3539)
                     /locus_tag="QEL58_001816"
     CDS             complement(3165..3539)
                     /locus_tag="QEL58_001816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005411254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676294.1"
                     /translation="MNYRRFLHGAKFWFWVALFVAYSAGAVGLLMIDTYEDRYRHLSK
                     VELTTVKAQEDVRRAGASQVAAVYRAQSGMPFASLPAGSTFQVVWPDGSTETMVIVDP
                     SSPNGVRPLANSQIPAEVADKR"
     gene            complement(3536..4498)
                     /locus_tag="QEL58_001817"
     CDS             complement(3536..4498)
                     /locus_tag="QEL58_001817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014038688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676295.1"
                     /translation="MAFAPTLKTWLLVLPAVAVLGVVGYRASGHVSAVPMPSELTSAL
                     SADTTSTPMPVVPEALARRLSAVERGNALPSGLPLDLRADFEEATDLYAYAQRLRVQA
                     DDGNHEARWMLSRVYDYCAQYALDPGGYRLDNNVLAGLGLTAAPAMVQARERVAQRCG
                     GFVPGDKLGAARVLAERRKAAAQGNLAAEASLFAEGEPLHDSPEYRRDLVERVRASRD
                     PEAFMAIAPGMGARAAGDRALTGQVAGEPLSELAWRVAACELGLPCGADSVLVNGFCA
                     NGGICSQDGAQDFRDFVYDAAVSRQGSGKMKQWIKRLVGKRGGQ"
     gene            4650..5570
                     /gene="prmA"
                     /locus_tag="QEL58_001818"
     CDS             4650..5570
                     /gene="prmA"
                     /locus_tag="QEL58_001818"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019338963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11 methyltransferase"
                     /protein_id="HDS1676296.1"
                     /translation="MPFLELTLRCTEATQPRYENALEDVGALAVTLLDAEADTSNEQA
                     ILEPGVGETPLWDTLVLSALFPADSNALLLLAALEAFDPELDWSSGSFRAVEDQDWER
                     AWLDQFQPMDFGSRTWIVPWNHELPDAAQAADAAVVRLDPGLAFGSGTHPTTALCLRW
                     LDQLAVDGQLQGQRVLDFGCGSGILALAALKLGAAEAIGVDNDPQALVATADNAERNG
                     EQARMQVYLPQDEPVATYPIVVANILASALDALAELLAARVATGGRIALSGILHGQEG
                     ELLQRYAAWFDELQATQDGDWMRITGVRRA"
     gene            5613..6386
                     /locus_tag="QEL58_001819"
     CDS             5613..6386
                     /locus_tag="QEL58_001819"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019338964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3426 domain-containing protein"
                     /protein_id="HDS1676297.1"
                     /translation="MSEPNPPRRPLATFLRTAPAGEAAPATDARMQDDAAPAAPTVEP
                     AADPIEPMQPPAAERRHDDDAFIVEDVAPLEPAPVAVPAAVAAASDAPSFLGSARART
                     LPAPRWHWLLVAGLALLLVLQSVLADRARLAADAGNRAWLAPLCGVLHCSLPPWHEPT
                     AFTMTSREIRPLPGQAGVLQVQASIRNDARWAQAWPDLRLSLSDADGRVIGSGVFTPA
                     QYLGEAPGTAPLEPGQSARIAFRVQEPAASTVAFTFDFL"
     gene            6502..6777
                     /gene="fis"
                     /locus_tag="QEL58_001820"
     CDS             6502..6777
                     /gene="fis"
                     /locus_tag="QEL58_001820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005419706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator Fis"
                     /protein_id="HDS1676298.1"
                     /translation="MNAVLSRPDNSRGAPRPPLREHVAQSVRRYLRDLDGCDADDVYE
                     IVLREMEIPLFVEVLNHCEGNQSRAAAMLGIHRATLRKKLKEYGISA"
     gene            complement(6914..7909)
                     /locus_tag="QEL58_001821"
     CDS             complement(6914..7909)
                     /locus_tag="QEL58_001821"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005411259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidate cytidylyltransferase"
                     /protein_id="HDS1676299.1"
                     /translation="MSFVLDVSGDLATQSVGQQTGLLFAGVGAVLVLATLVAETLRWR
                     RRGQPSAVIANLVSRIRAWWVMAIVVGLALFFGRAGVIVLFAIISLFALREFITLAPT
                     RSGDYYALLAAFYIVLPWQYYLVWIDWYGMYTLLIPVYAFLFLPILSTIGGDTTHYLE
                     RTAKVQWGLMICVFCISHVPLLLNLHVPGHDPSRNVLLFAFLVIVVQSSDVLQYIWGK
                     LLGRHLIAPKLSPSKTVEGFVGGVLSASALGAALWWITPFTPLQAFGLSLLINLMGFW
                     GGLVMSAIKRDRGIKDWGHMIEGHGGMLDRLDSVCFAAPVFFHVVRYYWKAGGGG"
     gene            complement(7906..8535)
                     /locus_tag="QEL58_001822"
     CDS             complement(7906..8535)
                     /locus_tag="QEL58_001822"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-acyl-sn-glycerol-3-phosphate acyltransferase"
                     /protein_id="HDS1676300.1"
                     /translation="MFARLIARACSGAIHVVTGARALWIGCAPSSEHRVYYGNHASHG
                     DFVLIWSSMPPALRRQVRPVAAAEYWQGDALRRYLIDAVFNGVLVEREAGHRQQDPLQ
                     VLREAVDEGCSLILFPEGTRNVGDEPLLPFKSGIYHLARQRPELEFVPVWIDNLKRVM
                     PKGRFLPLPLLCTATFGTPLRLQADEDKTAFLARSRQALLDLAPNGGRS"
     gene            complement(8549..8986)
                     /locus_tag="QEL58_001823"
     CDS             complement(8549..8986)
                     /locus_tag="QEL58_001823"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012481412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676301.1"
                     /translation="MSNAADLPMMHLLLRQGRLPAVLSLGLLLVALLLLGSEPGLAMM
                     AAGLLLLSVAMGVVQAYYAVRVQLDASLLQLLLREHLQGDAAAARVDAALHTAGLRRR
                     DAQAPMRGWDARWIGMRRLLVCQYVATLLQFSVLLLAVLWPQT"
     gene            complement(8983..10317)
                     /locus_tag="QEL58_001824"
     CDS             complement(8983..10317)
                     /locus_tag="QEL58_001824"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2/dual specificity phosphatase
                     family protein"
                     /protein_id="HDS1676302.1"
                     /translation="MATLAAAPRAAEGRPWRRALLWLALLGPFFFASYGFANWMASRH
                     AALPVMAFAWETRIPFVPWTIVPYWSIDLFYAISFFLCRQRLELDRHALRLFSAQVIA
                     VACFLLWPLRFSFERPEIGGVFGWLFDVLLGFDKPFNQAPSLHIVLLIVLWVKFAQYL
                     HGAWRWVLHGWALLIGVSVLTTFQHHFIDIPTGLLAGWLCVWLWPEQGTPPLRAWRTA
                     RDPRRWRMALFYLLGATALLVPVVVVRDAALWLLWPVVSLLLVALAYAGLGTAVFQKR
                     ADGRLTMAARWLLAPYLGAAWINSRVWTRRAPQPMPVMDGVWLGRIPSTALLPPLRGV
                     VDVCAELSCRAPGAAYARVPMLDLVVPTPAQLREAAEAIERLRAQGPLLVCCALGYSR
                     SAASVATWLLCSGRATDADAAVAIVRSARRSIVLHDSHLQAIAAAVAPESPA"
     gene            complement(10317..12068)
                     /locus_tag="QEL58_001825"
     CDS             complement(10317..12068)
                     /locus_tag="QEL58_001825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019338966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional alpha/beta hydrolase/class I
                     SAM-dependent methyltransferase"
                     /protein_id="HDS1676303.1"
                     /translation="MRQAQEREFHSFDQVALFYRYWAGTTATPATKAIVLLHRGHEHS
                     GRVTHLVDELDLPDTAFFAWDARGNGRSPGARGDAPGFPALVRDLDSFIAHIGAEHGI
                     AVEDIVVIAQSVGAVVAATWVHDYAPRLRALVMASPAFKVKLYVPFARPGLALMQKLR
                     GNFFVNSYVKPQWLTHDPARVQSYRTDPLITRPISVRVLLGLYEAADRVVADAQAISV
                     PVQLLVSGSDFVVHRGPQDRFYERLSSPIKERVHLPGFFHDTLGERDRAPALARIRSF
                     IQARFAEPLRELSRRDAHRHGPTFEESEILAWPPERNSLADLRWRVVRGGLRFGGTLS
                     EGIALGLQTGFDSGSTLDYIYRDEARGKGPLGRMVDRNYLDAIGWRGIRVRGQHLQEL
                     LRDAAQRLRGQGTPVRVLDVAAGHGRYVLEALGQGEQRADRIVLRDFSDLNVTQGQAL
                     IERLGAADIARFEQGDAFDPAQLARVDPAPTLAVVSGLYELFPDNDAVLRSLQGIAAT
                     VPVGGYLAYTGQPWHPQLEFIARALTSHRGGAAWVMRRRTQQEMDELVRLAGFEKVAQ
                     RIDDFGIFTVSLARRTA"
     gene            complement(12103..12720)
                     /locus_tag="QEL58_001826"
     CDS             complement(12103..12720)
                     /locus_tag="QEL58_001826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-alcohol phosphatidyltransferase family
                     protein"
                     /protein_id="HDS1676304.1"
                     /translation="MSIYALKGRFQDLLRPAVRGLYRMGVTANAVTVAAAVVSLLVAA
                     AVWCCAPAQPLLYLLLPLWMLLRMALNAVDGMLAREFGQQSRLGAYLNELCDVVADAA
                     LYLSLLSVPGVRPEALWLLAWTAALSEYAGVLGLMVGASRRYDGPMGKSDRAFVIGAL
                     GLLLAFEWVGAMAVTGVAAAMAALCMLTMINRVRRGLREAAVSPN"
     gene            12930..14513
                     /gene="purH"
                     /locus_tag="QEL58_001827"
     CDS             12930..14513
                     /gene="purH"
                     /locus_tag="QEL58_001827"
                     /EC_number="2.1.2.3"
                     /EC_number="3.5.4.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019302295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     phosphoribosylaminoimidazolecarboxamide
                     formyltransferase/IMP cyclohydrolase"
                     /protein_id="HDS1676305.1"
                     /translation="MTADLLPVRRALLSVSDKTGLAELATALAARGVELLSTGGTAKA
                     IRDMGLAVKDVADVTGFPEMMDGRVKTLHPMVHGGLLGRSGLDDAVMAEHGIGAIDLL
                     VLNLYPFESVTAKADCTLADAVENIDIGGPAMLRSAAKNFARVAVATDPSQYAELLAS
                     LDANDGQLSAATRFAFSVAAFNRVAQYDAAISNYLSAVTATDAAVPARAEYPAQMNST
                     FVKVMDLRYGENPHQSGAFYRDLYPVPGTLATFQQLQGKELSYNNLADADAAWECVRQ
                     FDAPACVIVKHANPCGVAVGAGNGDAYELAYATDPTSAFGGIIAFNKPLDAATAKVIL
                     DRQFVEVLIAPDYEPAALEYAQKKANVRVLRIPHGDGLNNFDSKRVGSGLLLQSSDNR
                     GMTRDELKVVSKLAPTDKQFTDLLFAWKVAKFVKSNAIVYARDNRTIGVGAGQMSRVY
                     SARIAGIKAADANLVVEGSVMASDAFFPFRDGIDAAAAAGIKAVIQPGGSMRDAEVIA
                     AADEHGLAMVFTGVRHFRH"
     gene            14530..15408
                     /locus_tag="QEL58_001828"
     CDS             14530..15408
                     /locus_tag="QEL58_001828"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012512280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676306.1"
                     /translation="MSAVSMKSLAALALAGAAVLAGCKPAGEPSVAPKVDAPSVAPAS
                     PAQHVSRTARLQAFLVQRYGSNAKLSGEWRGSWTDDGDTHAMDWQVCAEQPVVSGDSW
                     QQLLAVCGALVDGAHIDPGTIEFFVLRPQGEGFEVSSELTGERFGSGGQPGTASIIRA
                     GSDFYGFRVEDGWFGQGFSLLSQSLILPGPNGLVASGSVRSHIDNDAQYECDDVDANA
                     DPETSEDCRSRRFSIDFALRFDDSDRSARTWPLLIEETGTTCGGKPVRQQHRFTLDSK
                     TWTYSFPETLRREGCE"
     gene            15467..16750
                     /gene="purD"
                     /locus_tag="QEL58_001829"
     CDS             15467..16750
                     /gene="purD"
                     /locus_tag="QEL58_001829"
                     /EC_number="6.3.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014648625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylamine--glycine ligase"
                     /protein_id="HDS1676307.1"
                     /translation="MNVLVIGSGGREHALAWKLAQSSRVTEVIVAPGNAGTANEDKCR
                     NVAVKVTDIDGLLALAQAEGVALTVVGPEVPLVAGVVDRFRAAGLRIFGPTAAAAQLE
                     GSKAYAKDFLARHNIPTAFYAVHTEVDAALAYIREKGAPIVVKADGLAAGKGVIVAMT
                     LAEAEDAVRDMLSGNAFGDAGARVVIEEFLDGEEASFISMVDGVHALPMATSQDHKRV
                     GDGDTGPNTGGMGAYSPAPVVTPEVHARVMREVVNPTVQGMIADGIPFTGFLYAGLMI
                     DASGAPKVIEFNVRFGDPETQPVMLRLQSDLVELVEAAIDGRLDQIEAQWDARPSLGV
                     VMAARPYPESPVTGDVISGLGDVPASAKVFHAGTTLDAQGQVLSAGGRVLCVAALGHS
                     VRDAQANAYAGVAKVTWANEFHRNDIGWRAIAREG"
     gene            complement(16836..17168)
                     /locus_tag="QEL58_001830"
     CDS             complement(16836..17168)
                     /locus_tag="QEL58_001830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019338970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator"
                     /protein_id="HDS1676308.1"
                     /translation="MAKAPERRRAKSLLLEAVHDAAVNLHAHGFIDKRRLSSYEALCL
                     EPVPEYSSAQIRALRTSLQLSQPVFAGVLNTSVSTVRSWEQGEKKPSGPSLKLLNLID
                     RKGLEAVL"
     gene            complement(17152..17541)
                     /locus_tag="QEL58_001831"
     CDS             complement(17152..17541)
                     /locus_tag="QEL58_001831"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008268116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HDS1676309.1"
                     /translation="MMMPRVFRTRSFNRSMRRTVLSDAALCQSVREMEAGLVDADLGG
                     GLFKKRVALPGRGKRGSARTIVATQRGGHWFFLFGYEKSERAAITNAERDALQLYASE
                     FLKMSPAQLKRAVEYGDLQEICHGKGP"
     gene            complement(17708..18583)
                     /gene="rpoH"
                     /locus_tag="QEL58_001832"
     CDS             complement(17708..18583)
                     /gene="rpoH"
                     /locus_tag="QEL58_001832"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002803651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoH"
                     /protein_id="HDS1676310.1"
                     /translation="MSQNTSTALVANNLPIPSALGSLDAYIGAVHQIPVLSVDDEQDL
                     ARRFRDGNDLDAARELVHSHLRFVVHVARGYNGYGLALGDLIQEGNIGLMKAVKRFDP
                     DMGVRLVSFAVHWIRAEMHEFILKNWRIVKVATTKAQRKLFFNLRKSKTRLGWMNAAE
                     VSAVAKDLNVSEREVMEMESRLSGRDIGFDAPTDEDNEHAPPSPAAFLVANDEDPSMA
                     YERADSEDNQMQLLREGLAELDARSRDIIRRRWLEADSKVTLQELADEYGVSAERIRQ
                     VEANALKKMKALFTA"
     gene            complement(18862..>19094)
                     /locus_tag="QEL58_001833"
     CDS             complement(18862..>19094)
                     /locus_tag="QEL58_001833"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012512285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HDS1676311.1"
                     /translation="NREREGLVFMLWGAYAQQKGKVIDTRRHRVLKSPHPSPLSAHRG
                     FLGCRHFSMANEYLQRRGQAPIDWSLPPRSAL"
BASE COUNT         3424 a         6731 c         6064 g         2875 t
ORIGIN      
        1 gcttgctgcg caccgaactt ccttcatcca cgcatggcgt ggatctaccg catcacggcc
       61 cgttgcggcg tcggtcatcg cccggccttg ccggcatcgt cggcctacgt gccagcatcc
      121 ccggccagca ccacgttcag cgcgccttga tccggctccc gccgtacagc cgcaagcact
      181 ccggcgaatt tcaaacaatc gattgaaaca gggcaaactt cgccgaactg gacagcatcc
      241 gccgcttccg ccagactgcc gccctttccc gtcttccgga tcccatggcg aagctgctgg
      301 tcctgcacgg ccccaacctc aacctgctcg gcacccgcga gccggaggtc tacggccaca
      361 ccacgctggc cgatatcgac caggcgctgg ccgcgcaggc gtccgccgcc gggcacgccg
      421 tggaaagcct gcagtccaat gccgagcatg ttctggtgga ccgcgtgcag gccgcgcgca
      481 acgacggaac cgctttcatc ctgatcaacc ccgccgcctt cacccacacc tcggtcgccc
      541 tgcgcgatgc gctggcggcg gtggccgtgc cgttcatcga gatccacctg tccaacccgc
      601 atacccgcga accgttccgc cagcacagct acttcagtga caaggcggtg ggcgtggtgt
      661 gcggcttcgg tgccgacagc taccgctacg cgatggacgc ggcgctgctg cgcgtgcagg
      721 cggcgggcgc gtgatgatgc tgccgcgcgt gcttgccagc ctcgtgctgt gcgccagcct
      781 gtgcggcgtt gcccatgcgg gcgaccgcag cgccgaaggc atcgactgcg cgcaggccac
      841 cggcggctac gagcgcgaca tgtgcgattc cgatcgcctg gacgatgtcg accgcgaatt
      901 gaacgccgtc tacgcgcagg cactcgacga actgaaggca caggcggccg atggcagctg
      961 cagccgctgc gcagcggccg aacaacagct ggtgaaggcc cagcgcatct ggatcaccct
     1021 gcgcgatgca gactgcgagg cggtgtatgc cttcaacgca gacggcacct cgcgcaatcc
     1081 cgcgaagatg caatgcctga tcacccagac gcgcgaccgt acgcggcagc tgcgcgagtt
     1141 ctacgaactg ctttgacccg agcgcgacgc gctccccacc acactgacat caagagcaaa
     1201 gaggccacca tggatctccg caaaatcaag aagctgatcg acctgctgga agagtcgaac
     1261 ctggctgaaa tcgaaatcaa ggaaggcgaa gagtcggtgc gcctgtcgcg cgccccggtg
     1321 gccggctacg ccgcgccgat gccggcaccg gtgtatgccg ccccggctgc cccggccgcg
     1381 caggcgatgc cgatgcagtc gccgaccgaa gcgtccaccg gcggcactgc caagccgggc
     1441 ccggcgctgc cggaaggcca cgtgctgcgc tcgccgatgg tcggcacctt ctacgcctcg
     1501 tccgccccgg acaagccggc cttcgtcagc gtcggccagc aggtcaagga aggcgagacc
     1561 ctggccatca tcgaagcgat gaagatgttc aacccgatcg aagccgacaa gtccggcacc
     1621 atcgtcgcca tcctcggcga aaacggccag ccggtggagt tcgaccagcc gctgttcgtg
     1681 atcggctgag gggcacgcca tgctcgacaa agtcgtcatt gccaaccgag gggagatcgc
     1741 gctgcgcatc ctgcgcgcgt gccataccct gggcatccgc acggtggccg tgcattccac
     1801 ggtcgaccgc aacctcaagc acgtggccat ggccgacgag tcggtctgca tcggcccggc
     1861 gccgtcgccg cagagctacc tcaacatccc ggcgctgatc gccgccgctg aagtcaccga
     1921 cgcccaggcc atccacccgg gctacggctt cctgtcggag aacgccgact tcgccgagcg
     1981 cgtggaggag tccggcttca tcttcatcgg ccccaaggcc gacaccatcc gcatgatggg
     2041 cgacaaggtc gaagccatcc gcgcgatgaa gtcggccggc gtgccgtgcg tgcccggctc
     2101 gggcggcccg ctgggcgagg acatcgtcgc caacaccaag atcgcccgtg agatcggcta
     2161 tccggtcatc atcaaggcgg ccggtggcgg cggtggccgc ggcatgcgcg tggtgcacgc
     2221 cgaagcctcg ctgaagacct ccatcgaaac caccaagagc gaggccaagg ccgcgttcgg
     2281 caatggcgag gtctacatgg agaagttcct ggagaacccg cgccacgtgg agatccaggt
     2341 gctggccgac ggccagggca acgccatcca cctgggtgag cgcgactgct cgatgcagcg
     2401 ccgccaccag aaggtggtgg aagaagcacc ggcaccgggc atcagcgccg aacagcgcga
     2461 gcagatcggc aaggtgtgta ccgaagcctg cgtgcgcatc ggctaccgcg gcgccggcac
     2521 gttcgagttc ctgtacgagg acggccgctt ctacttcatc gaaatgaaca cccgcatcca
     2581 ggtagagcat ccggtcaccg aaatggtcac cggcatcgac ctggtggccg agcagctgaa
     2641 gatcgccgcc ggccagaagc tgtcgatcaa gcagagcgac gtggtgctca ccggccacgc
     2701 catcgagtgc cgcatcaacg ccgaagacgc cgaaaccttc gtgccgagcc cgggcaccat
     2761 caccggcttc catccgccgg gcggcccggg cgtgcgcgtg gacacccaca tctacagtgg
     2821 ctaccgcgtg ccgtcgaact acgactcgat gatcggcaag ctgatcgtgc acggcccgga
     2881 tcgcgaaacc gccatcgccc gcatgcgggt ggcgctgagc gagatggtgg tcgacggcat
     2941 caagaccaac atcgcgctgc agcagcggat catgcgtgac aagggcttcc aggccggtgg
     3001 ccagaacatc cactacctgg aaaagcgcct ggccgaacgc aagaacaagc cgatcgcgtt
     3061 gacctgatcg gtgccacagg ctggatacgg aaagggcggg gatttccccg ccctttttcg
     3121 ttgtctgtag cgccgagcat ggactcggcg ctacgcaaac aggttcagcg cttgtccgcc
     3181 acttcggccg gaatctgcga attcgccagt gggcgaacgc cattgggtga actcgggtcg
     3241 acgatcacca tggtttcggt ggaaccatcg ggccagacca cctggaaggt gctgccggcc
     3301 ggcagtgagg cgaacggcat gccgctctgc gcgcgataga ccgccgcaac ctggctggca
     3361 ccggcgcggc ggacatcttc ctgcgccttc accgtggtca gttccacttt tgacagatgc
     3421 cggtagcgat cctcgtaggt atcgatcatc aacagaccga ccgcacccgc cgagtaagcc
     3481 acgaacaacg ccacccagaa ccagaatttg gccccatgca ggaatcgacg gtagttcatt
     3541 gcccgcctct cttgccaacc aatcgcttga tccactgctt catcttcccc gaaccttgcc
     3601 gcgaaaccgc agcgtcatac acgaaatccc ggaaatcctg tgctccatcc tgcgaacaga
     3661 tccctccgtt cgcacaaaaa ccgttcacca gtacgctgtc cgcaccacaa ggtagaccga
     3721 gttcacaggc cgcaacccgc catgcaagtt cgctgagcgg ctcaccggcc acctgcccgg
     3781 tcagcgcacg atcgcccgct gcccgtgcgc ccattcccgg cgcaatggcc atgaaggctt
     3841 ccgggtcgcg cgacgcacgc acccgctcga ccagatcacg gcggtattcg gggctgtcat
     3901 gcagcggctc cccttcggcg aacaacgatg cctctgccgc caggttgccc tgtgcggccg
     3961 ccttgcgccg ctcggccagc acccgcgcgg cgcccagctt gtcgcccggc acgaaaccac
     4021 cgcagcgctg cgccacgcgt tcgcgtgcct gcaccatcgc cggcgcagcg gtcagcccca
     4081 gtccggccag cacgttgttg tccaggcgat agccacccgg atcaagcgcg tactgcgcgc
     4141 agtagtcata gacccggctc agcatccaac gcgcttcatg attgccgtca tcggcctgca
     4201 cgcgcagacg ctgcgcgtag gcgtacagat cggtggcctc ctcgaagtcg gcgcgcagat
     4261 ccagcggcag ccccgacggc agcgcgttgc ctcgctcgac agccgacagg cggcgtgcca
     4321 gtgcttcggg caccaccggc atcggcgtgc tcgtggtgtc cgccgacagc gccgacgtca
     4381 gctccgacgg catcggcacc gcggaaacgt ggccgctggc ccgatacccg accacgccca
     4441 gcacggccac cgccggcagc acgagcaacc aggttttcag ggtcggagcg aaggccatcg
     4501 gcggcagtca ggcgtcaagg cgcacaggaa agcgtgcagt ttagcaaggc ccggcagccc
     4561 tgtctgaacg gccttcgttc atctcaaggc atacggagac gccctgatgg tctagcatgg
     4621 ccccctttcc cgcgattgcc cccaccgcca tgccgttcct ggaactgacc ctgcgttgca
     4681 ccgaagccac acagccccgc tatgaaaacg cgcttgaaga tgtgggcgca ctggctgtca
     4741 ccctgctcga tgccgaggcc gataccagca acgagcaggc catccttgag ccgggcgtgg
     4801 gcgagacccc gctgtgggac accctggtac tgagcgcgct gttccccgcc gacagcaacg
     4861 cgctgttgct gctggctgcg ctggaggcct tcgatccgga gctggactgg agcagtggca
     4921 gcttccgcgc ggtcgaggat caggactggg aacgcgcctg gctggaccag ttccagccga
     4981 tggatttcgg cagccgtacc tggatcgtgc cgtggaacca tgagctgccg gacgccgcac
     5041 aggccgccga cgccgccgtg gtgcggctgg acccgggcct ggcgttcggc tcgggcaccc
     5101 acccgaccac cgcgctgtgc ctgcgctggc tggaccagct ggccgtggat ggccagctgc
     5161 aaggccagcg cgtactcgac ttcggttgcg gctcgggcat cctcgccctg gccgcgctga
     5221 agctgggcgc cgctgaggcc atcggcgtgg acaacgatcc gcaggcactg gttgccaccg
     5281 ccgacaatgc cgagcgcaac ggcgagcagg cgcgcatgca ggtgtacctg ccgcaggacg
     5341 agccggttgc gacctatccg atcgtagtcg ccaacatcct cgcctcggca ctggatgcgc
     5401 tggccgaact gctggccgcg cgcgtcgcga cgggcggccg catcgccctg tccggcatcc
     5461 tgcatggcca ggaaggtgag ctgctgcaac gctacgcggc gtggttcgac gaactgcagg
     5521 ccacgcagga cggcgactgg atgcgcatca ccggcgtgcg ccgcgcctga tcgtggttga
     5581 atgactgctg gatccgagcc cgcgccctga gcatgtccga gccgaacccg ccgcgccgcc
     5641 ccctggctac cttcctgcgc actgcgccgg cgggtgaagc cgcgcccgcg accgatgcgc
     5701 gcatgcagga cgacgccgca cccgcagcgc ccacggtgga acctgcggcc gatcccatcg
     5761 agccaatgca accgccggcg gcagaaagac gacacgatga tgacgctttc atcgtggagg
     5821 acgtcgcgcc cctcgaaccg gcgccggtcg cggtgccggc agcggtggct gctgccagtg
     5881 atgctcccag tttcctcggc agcgcgcgag cgcgcacgct gccggcaccg cgctggcact
     5941 ggctgctggt ggcaggtctg gcactgctgc tggtactgca gagcgtgctg gccgaccgcg
     6001 cgcgcctggc cgccgacgcc ggcaaccgtg catggctggc ccccctgtgc ggcgttctcc
     6061 attgcagcct gccgccctgg catgaaccca ccgcgttcac catgaccagc cgcgagatcc
     6121 gcccgctgcc cggacaggcc ggcgtactgc aggtacaggc cagcatccgc aacgatgcgc
     6181 gttgggcgca ggcctggccg gaccttcgcc tgtcgctgtc cgatgccgat ggccgggtga
     6241 tcggcagcgg tgtgttcacc cccgcgcaat acctgggcga ggcccccggc acggcaccgc
     6301 tggagccggg tcagagcgca cgcattgcgt tccgtgtaca ggagcccgcc gcatccactg
     6361 tcgcattcac cttcgacttc ctctgaccag gctgaagacg cccagccgtg gcaggtcgag
     6421 cacgctcgcg ctagactgac cgccaccacc tcgtccggcc gcgcgctccg cgcgcacggg
     6481 ccaaccgaat cgggaacccc cttgaacgct gtcctttctc gtcctgacaa cagtcgtggc
     6541 gctccccggc caccgctgcg tgaacacgtc gcccagtccg tgcgccgcta cctgcgtgat
     6601 ctcgatggct gcgacgcgga cgatgtctac gagatcgtgc tgcgcgagat ggagatcccg
     6661 ttgttcgtgg aagtgctcaa ccactgcgaa ggcaaccaga gccgcgccgc agcgatgctg
     6721 ggcatccacc gtgccaccct gcgcaagaag ctgaaggaat acggcatcag cgcgtaagcg
     6781 ccgataccgc ctttgtagag tcgagccatg ctcgactgct tctgcgccag gcaacccgtg
     6841 aaaagcagtc gagcatggct cgactctaca agagcggctc gccacgccat gcgtggatgg
     6901 cgccctcccg gaatcaaccg ccgccgcccg ccttccagta gtagcgcacc acatggaaga
     6961 acaccggtgc ggcgaagcac accgaatcca gccggtcgag catgcccccg tggccctcga
     7021 tcatgtggcc ccagtccttg atgccgcggt cgcgcttgat cgccgacatc accaggccgc
     7081 cccagaaccc catcaggttg atcagcagcg acaggccgaa ggcctgcagt ggcgtgaatg
     7141 gcgtgatcca ccacagcgcc gcgcccagcg cgctggcact cagcacgccc cccacgaagc
     7201 cctccaccgt cttcgacggc gacagcttcg gtgcgatcag gtgcctgccc agcagcttgc
     7261 cccagatgta ctgcagcacg tccgaggact gcaccacgat caccaggaag gcaaacaaca
     7321 gcacgttgcg cgacgggtca tgccccggca cgtgcaggtt cagcagcagc gggacgtgcg
     7381 agatgcagaa cacgcagatc atcaaccccc actgcacctt tgccgtacgc tccaggtagt
     7441 gggtggtgtc gccgccgatg gtcgacagga tcggcaggaa caggaacgca tagaccggaa
     7501 tcagcagcgt gtacatgccg taccagtcga tccacaccag gtagtactgc cagggcagca
     7561 cgatgtagaa cgctgccagc agcgcgtagt agtcgcccga gcgggtcggc gccagggtga
     7621 tgaactcgcg cagcgcgaac agcgagatga tcgcgaacag cacgatcacc ccggcacggc
     7681 cgaagaacaa cgccagcccg accacgatcg ccatcaccca ccacgcgcgg atgcgcgaga
     7741 ccaggttggc gatcaccgcg ctgggctgcc cgcgccggcg ccagcgcagg gtctcggcca
     7801 ccagtgtggc cagcaccagc accgcgccga caccggcaaa cagcaggccg gtctgctggc
     7861 ctacgctctg cgttgccaga tcgccggaga catccagcac gaaactcatg aacggcctcc
     7921 attgggtgcc aggtccagca gcgcctgccg gctgcgcgcc aggaaagcgg tcttgtcctc
     7981 atcggcctgc agccgcagcg gcgtaccgaa ggtggccgtg cacagcagcg gcaacggcag
     8041 gaaccggccc ttgggcatca cccgtttcag gttgtcgatc cacaccggta cgaactccag
     8101 ttccgggcgc tgccgcgcca ggtggtaaat gccgctcttg aacggcagca gcggttcgtc
     8161 gccgacattg cgcgtgccct ccgggaacag gatcaacgaa cacccttcat caaccgcttc
     8221 gcgcagcacc tgcaacggat cctgctggcg atgcccggcc tcgcgctcga ccagcacgcc
     8281 gttgaacacc gcatcgatca ggtagcggcg cagggcatcg ccctgccagt actcggccgc
     8341 cgccaccggg cgcacctggc ggcgcagcgc cggtggcatc gacgaccaga tcagcacgaa
     8401 gtcaccgtgg ctggcatggt tgccgtaata gacgcggtgc tcgctggatg gtgcacagcc
     8461 gatccacagc gcgcgtgcgc cggtcaccac atggatcgcg ccactgcagg cgcgggcaat
     8521 cagtctggcg aacatcggtt cctcccgttc acgtctgcgg ccacagcacc gccagcagca
     8581 gcaccgagaa ctgcagcagg gtggccacgt actggcacac cagcaggcgc cgcatgccga
     8641 tccagcgcgc gtcccagcca cgcatcggcg cctgcgcatc gcggcgacgc aggccggcgg
     8701 tgtggagggc ggcatccacc cgtgcggcgg ccgcatcccc ctgcaggtgt tcgcgcagca
     8761 gcagctgcag caggctggca tcaagctgca cgcgcaccgc gtagtacgcc tgcaccacgc
     8821 ccatcgccac gctcagcaac agcaggccgg cggccatcat cgccagcccc ggctcactac
     8881 ccagcaacag cagcgccacc agcagcaggc ccagtgacag cacggctggc aggcggccct
     8941 ggcgcagcag caggtgcatc atcggcagat cggcagcgtt gctcatgcag ggctctccgg
     9001 tgcgacggcg gccgcgatgg cctgtagatg actgtcatgc aggacgatcg accgccgtgc
     9061 gctgcgcacg atcgccaccg cagcgtcggc atcggtggca cgaccactgc acagcagcca
     9121 ggtcgcgacg ctggcggcac tgcgcgaata gcccagcgca cagcacacga gcagcggccc
     9181 ctgcgcacgc agccgctcga tcgcctcggc cgcctcgcgc aactgcgccg gcgtgggtac
     9241 caccaggtcc agcatcggca cgcgggcata cgccgcgccc ggcgcacggc aggacaattc
     9301 ggcacagacg tccaccacgc cccgcagcgg cggcagcaac gcggtgctgg gaatgcgccc
     9361 caaccacacg ccgtccatca ccggcatcgg ctgtggcgca cggcgtgtcc acacccgtga
     9421 gttgatccag gccgcaccca gatacggcgc cagcagccag cgtgccgcca tcgtcaggcg
     9481 tccatcggcg cgcttctgga acaccgccgt gcccagcccg gcgtaggcca gtgccaccag
     9541 cagcagcgac accaccggcc acagcagcca cagcgctgca tcgcgcacca ccaccactgg
     9601 taccagcagg gccgtcgccc ccagcagata gaacagcgcc atgcgccagc gcctggggtc
     9661 gcgtgcggtg cgccaggcgc gcagcggtgg cgtgccctgc tccggccaca gccagacgca
     9721 tagccatccc gccagcaggc cggtcgggat gtcgatgaaa tggtgctgga acgtggtcag
     9781 taccgaaacg ccgatcagca gcgcccaccc atgcagcacc cagcgccagg cgccgtgcag
     9841 gtactgcgcg aacttcaccc acagcacgat cagcagcacg atgtgcagcg acggcgcctg
     9901 gttgaacggc ttgtcgaagc ccagcagcac atcgaacagc cagccgaaca caccgccgat
     9961 ctccggccgt tcgaagctga aacgcaacgg ccacagcagg aaacacgcca ccgcgatgac
    10021 ctgcgcgctg aacagccgca gcgcgtgccg gtccagttcc agccgttgcc ggcacaggaa
    10081 gaacgagatc gcatagaaca gatcgatcga ccagtacggc acgatcgtcc acggcacgaa
    10141 cggaatgcgt gtctcccagg cgaacgccat caccggcagc gcagcatggc ggctggccat
    10201 ccagttggcg aagccgtagc tggcgaagaa gaacgggccc aacagggcca gccacaacag
    10261 ggcgcgccgc caggggcgcc cctctgcggc ccgcggggcg gcggcgagcg tcgccatcac
    10321 gcggtccggc gtgccagcga cacggtgaag atgccgaagt catcaatgcg ctgcgccacc
    10381 ttctcgaacc cggccagtcg caccagctcg tccatctcct gctgggtacg acgccgcatc
    10441 acccacgccg cgccaccgcg gtggctggtc agcgcgcggg cgatgaactc cagctgcggg
    10501 tgccagggct ggccggtgta ggccagataa ccgccgaccg gcaccgtcgc ggcgatgccc
    10561 tgcagcgagc gcaataccgc atcgttgtcg gggaacagtt cgtacaggcc cgagaccacg
    10621 gccagcgtcg gcgccgggtc caccctggcc agctgcgccg gatcgaacgc atcgccctgc
    10681 tcgaagcggg cgatgtcggc cgccccgagc cgctcgatca gcgcctggcc ctgggtgaca
    10741 ttcaggtcgc tgaaatcacg cagcacgatg cgatcggcgc gctgttcgcc ctggcccagc
    10801 gcttccagca cgtagcggcc atggccggca gccacgtcca gcacgcgcac cggcgtgccc
    10861 tgcccgcgca ggcgctgggc agcatcgcgc agcagttcct gcaggtgctg gccacgcacg
    10921 cggatgccgc gccagccgat cgcatccaga tagttgcgat cgaccatgcg tcccagcggg
    10981 cccttgccac gggcttcgtc gcggtagatg tagtccagcg tgctgcccga atcgaaaccg
    11041 gtctgcagcc ccagcgcgat gccttcggac aacgtgccgc cgaagcgcag gccaccgcgc
    11101 accacgcgcc agcgcaggtc ggccaggctg ttgcgctctg gcggccacgc caggatttcc
    11161 gattcctcga aggtcggccc atggcggtgc gcatcgcgtc gcgacagctc gcgcagcggt
    11221 tcggcgaaac gcgcctggat gaagctgcgg atgcgtgcca gcgcaggcgc gcggtcgcgc
    11281 tcgcccagcg tgtcgtggaa gaagcccggc aggtgcacgc gctccttgat cgggctggac
    11341 aggcgttcgt agaagcggtc ctgcgggccg cgatgcacga cgaaatccga accggacacc
    11401 agcagctgca ccggcacgct gatcgcctgt gcgtcggcca cgacgcggtc ggcggcctcg
    11461 tacaggccca gcagcacgcg caccgagatc ggccgggtga tcagcggatc ggtgcggtag
    11521 ctctgcaccc gcgccgggtc gtgggtcagc cactgcggct tgacatagct gttgacgaag
    11581 aagttgccgc gcagcttctg catcaacgcc aggcccgggc gagcgaacgg cacatacagc
    11641 ttcaccttga acgccggcga ggccatcacc agcgcgcgca ggcgcggcgc atagtcatgc
    11701 acccaggtgg cagcgaccac ggcgcccacg ctctgcgcga tcaccacgat gtcttccacc
    11761 gcgatgccgt gctcggcacc gatatgggcg atgaagctgt ccagatcgcg cacaagcgcc
    11821 gggaagcccg gtgcatcgcc acgcgcaccc ggcgaacggc cgttaccgcg cgcatcccag
    11881 gcgaagaagg cggtgtcggg caggtccagc tcatcgacca ggtgggtgac gcgcccggag
    11941 tgctcgtggc cgcggtgcag cagcacgatg gccttggtgg ccggcgttgc ggtggtgccc
    12001 gcccagtacc ggtagaacag cgctacctgg tcgaagctgt ggaattcccg ttcctgcgcc
    12061 tgacgcatgc aatctcctga ttgtcttttt gtatctgctt gattaattag gcgaaaccgc
    12121 cgcttcccgc agtccgcgac ggacgcggtt gatcatggtc agcatgcaca gcgccgccat
    12181 ggccgcagcc acgccagtga ccgccatcgc gccaacccac tcaaacgcca gcagcaggcc
    12241 cagcgcaccg atcacgaacg cgcggtcgct cttgcccatc gggccgtcgt agcggcggct
    12301 ggcaccaacc atcagcccca gcacgccggc gtactcgctc agcgccgccg tccaggccag
    12361 cagccacagc gcttccgggc gcacgcccgg cacgctgagc aggctcaggt acagcgcggc
    12421 gtcggcgacc acatcgcaca gttcgttcag ataggcaccc agccgcgact gctggccgaa
    12481 ctcgcgggcc agcatgccgt ccaccgcgtt gagtgccatg cgcagcagca tccacaacgg
    12541 cagcagcagg tacagcagcg gctgggccgg ggcgcagcac cacaccgcag cggccaccag
    12601 cagcgagacc acggcagcgg ccacggtcac cgcgttggcg gtgaccccca tgcggtacag
    12661 gccgcgtacg gctggacgca acaggtcctg gaaacgtccc ttcaatgcat agatcgacat
    12721 gatccgaagc cgctgatcct tggcagttcg ggcacagcct acccgattgc ggcagtgcgc
    12781 cccatccaat tgcttgcagg ccgccccggc ccagggtgtg ctgaaggcgg ccgcagggcc
    12841 gtcggcgcca gccgattttg cccgccagcg cccgccaccg gcccccaccg cctacaatat
    12901 cggccccgct ccgctgccga ttctgtccca tgactgctga tctgttgccc gtccgtcggg
    12961 ccctcctctc cgtttccgac aagaccggcc tggccgagtt ggccactgcg ctggctgcac
    13021 gcggcgtgga gctgctgtcc accggcggca ccgccaaggc cattcgcgac atgggcttgg
    13081 ccgtgaagga cgtggccgac gttactggct tcccggagat gatggacggc cgggtcaaga
    13141 ccctgcaccc gatggtgcac ggcggcctgc tgggtcgttc gggcctggat gatgcagtga
    13201 tggccgagca cggcatcggt gccatcgacc tgctggtact gaacctgtac ccgttcgaat
    13261 cggtcaccgc caaggccgac tgcaccctgg ccgacgcggt cgagaacatc gacatcggcg
    13321 gcccggccat gctgcgttcg gcagccaaga acttcgcccg cgtggcggtg gccaccgacc
    13381 cgtcgcagta cgccgaactg ctggcctcgc tggacgccaa cgacggccag ctgagcgccg
    13441 ccacccgctt cgcgttctcg gtggccgcgt tcaaccgcgt cgcccagtac gacgcggcaa
    13501 tcagcaacta cctgtcggcg gtcaccgcca ccgacgccgc ggtaccggcg cgtgccgagt
    13561 acccggcgca gatgaactcc accttcgtga aggtgatgga cctgcgctac ggcgaaaacc
    13621 cgcaccagag cggcgcgttc taccgcgacc tgtacccggt gccgggcacg ctggccacgt
    13681 tccagcagct gcagggcaag gagctgagct acaacaacct ggccgacgcc gatgcggcgt
    13741 gggaatgcgt gcgccagttc gacgcgccgg cctgtgtcat cgtcaagcac gccaacccgt
    13801 gcggcgtggc cgtcggtgcc ggcaacggcg atgcctacga gctggcctac gccaccgacc
    13861 cgaccagcgc cttcggcggc atcatcgcct tcaacaaacc actggacgcc gccaccgcca
    13921 aggtgatcct ggaccgccag ttcgtcgaag tgctgattgc cccggactac gagccggccg
    13981 cgctggaata cgcgcagaag aaggccaacg tgcgcgtgct gcgcatcccg cacggcgatg
    14041 gcctgaacaa cttcgacagc aagcgcgtcg gctcgggcct gctgctgcag tcctcggaca
    14101 accgcggcat gacccgagat gaactgaagg tggtcagcaa actggcgccg accgacaagc
    14161 agttcaccga cctgctgttc gcctggaagg tggccaagtt cgtgaagtcc aacgcgatcg
    14221 tctacgccag ggacaaccgc actatcggcg tgggtgccgg ccagatgagc cgtgtgtact
    14281 cggcgcgcat cgccggcatc aaggccgccg atgcgaacct ggtggtcgag ggctcggtga
    14341 tggcctccga cgcgttcttc ccgttccgcg acggcatcga cgccgccgct gccgctggca
    14401 tcaaggcggt gatccagccg ggcggttcga tgcgcgatgc cgaagtgatc gccgccgccg
    14461 acgaacatgg cctggccatg gtgttcaccg gcgtgcgcca cttccgtcat tgatactgga
    14521 gcgacacgga tgtccgcagt ttcgatgaaa tcgctggccg ccctcgccct cgcgggtgcg
    14581 gccgtactgg cgggctgcaa gcctgcgggc gagcccagcg tggcgccgaa ggtggatgcg
    14641 ccttcggtcg cccccgcctc accggcacag catgtcagcc gcaccgcacg actgcaggct
    14701 ttcctggtcc agcgttacgg cagcaacgcc aagctctccg gtgaatggcg cggcagctgg
    14761 accgacgatg gcgacaccca tgcgatggac tggcaggtct gcgcggaaca accggtagtg
    14821 agcggtgaca gctggcaaca gctgctggcc gtgtgcggtg cgctggtcga tggcgcacac
    14881 atcgacccgg gcaccatcga gttcttcgtg ctgcgccctc agggcgaggg cttcgaagtg
    14941 agcagcgaac tgaccggcga gcgtttcggc agcggcggcc aacccggcac cgccagcatc
    15001 atccgcgccg gtagcgactt ctatggcttc cgtgtcgagg acggctggtt cggccagggc
    15061 ttctcgctgc tctcgcaatc gctgatcctg cccggcccga acggcctggt cgccagtggc
    15121 agcgtgcgca gccatatcga caatgacgcc cagtacgagt gcgacgacgt cgacgccaat
    15181 gccgatcctg aaacgtcgga agactgccgc agccgccgct tcagcatcga tttcgcactg
    15241 cgtttcgacg acagtgaccg cagtgcgcgc acctggccgc tgctgatcga ggagaccggc
    15301 accacctgtg gcggcaaacc agtccgccag cagcaccgct tcaccctgga cagcaagacc
    15361 tggacctatt ccttccccga aacgctgcga cgcgaaggct gcgagtgagc cacgcgcgcc
    15421 gccggggata ccgatcttcc cttcccacgc aatctggaat ctcgtgatga acgtacttgt
    15481 catcggctct ggcggccgcg aacacgccct ggcatggaag ctggcccagt cctcccgtgt
    15541 caccgaagtg atcgtggcgc ccggcaacgc cggcaccgcc aacgaagaca agtgccgcaa
    15601 cgtggcggtg aaggtcaccg acattgatgg cctgctcgcg ctggcccagg ccgaaggcgt
    15661 ggcgctgacc gtggtcggcc cggaagtgcc gctggtagcc ggcgtggttg accgcttccg
    15721 cgccgccggc ctgcgcatct tcgggccgac cgccgccgcc gcgcagctgg aaggcagcaa
    15781 ggcctacgcc aaggacttcc tggcccgcca taacattccc accgcgttct atgccgtgca
    15841 caccgaggtg gatgccgcgc tggcctacat ccgcgagaag ggcgcaccga tcgtggtcaa
    15901 ggccgatggc ctggccgccg gcaagggcgt gatcgtggca atgacgctgg ccgaagccga
    15961 ggacgcggtg cgtgacatgc tctcgggcaa cgcgttcggt gatgccggtg cacgcgtggt
    16021 catcgaggaa ttcctcgacg gcgaggaagc cagcttcatt tcgatggtgg acggcgtgca
    16081 tgcgctgccg atggccacct cgcaggacca caagcgcgtc ggcgacggcg acaccggccc
    16141 gaacaccggc ggcatgggcg cctattcgcc ggccccggtg gtcacgccgg aggtacacgc
    16201 acgggtgatg cgcgaggtgg tgaacccgac cgtgcagggc atgatcgccg acggcatccc
    16261 gttcaccggc ttcctctatg ccggcctgat gatcgacgcc agcggcgcgc cgaaggtgat
    16321 cgaattcaac gtgcgctttg gcgacccgga aacccagccg gtgatgctgc gcctgcagtc
    16381 ggacctggtg gagctggtgg aagcggccat cgacggccgc ctggaccaga tcgaagcaca
    16441 gtgggatgca cggccgtcgc tgggcgttgt gatggccgcc aggccgtacc cggaatcgcc
    16501 ggttaccggt gacgtcattt ccggcctcgg tgacgtgccg gccagtgcca aggtgttcca
    16561 tgccggcacc acgctggacg cgcagggcca ggtgctcagt gccggcggtc gcgtgctgtg
    16621 cgtggcggcg ctgggccaca gcgtgcgcga cgcacaggcg aatgcgtatg cgggcgtggc
    16681 caaggtgacc tgggccaatg agttccaccg caacgacatc ggctggcgcg cgatcgcacg
    16741 cgagggctga ggcagtcacg gcatcgggac atccacgcat ggcgtggatt gaatagcgcc
    16801 gaaacgaacg ggcccggcaa tgccgggccc ttgctttaca ggactgcttc gagtcccttc
    16861 cgatcaatca ggttcagcag tttcagtgag ggcccgctgg gcttcttctc gccttgctcc
    16921 caactgcgca ccgtggagac gctggtgttc agcaccccgg caaacactgg ctggctgagc
    16981 tgcaacgatg tacgcagcgc gcggatctgg gcactgctgt attcgggaac aggctcaagg
    17041 cacagcgcct cgtagctgct caaccgacgt ttgtcgatga agccgtgcgc atgcagattc
    17101 acggccgcat cgtgcaccgc ctcaagcagc aaactttttg cgcgccttcg ctcaggggcc
    17161 tttgccatgg cagatctcct gtagatcccc gtactccacg gcacgcttca actgtgccgg
    17221 actcattttc aggaactccg atgcatacaa ctgcagtgca tctcgttccg cattcgtgat
    17281 cgcggcgcgt tcgctctttt catatccgaa aagaaagaac caatgcccgc ctcgctgtgt
    17341 tgcgacgatg gttcgagcgc ttccgcgctt tcctcgtccc ggcaacgcga cgcgcttctt
    17401 gaagaggcct ccgccaagat ctgcatccac cagacccgct tccatttccc ttaccgactg
    17461 gcacaaggca gcgtcagaca gcacggtcct gcgcatgctg cggttgaaac ttcgggtgcg
    17521 gaaaacgcgt ggcatcatca taccgtgcca cccagtggta cggcgtgaac atcaggatcc
    17581 agcgcaggac ccggtcggcg caatcaccgt cctggcgtca gggcatccac gcatggcgtg
    17641 gatgcgcccc acaaacgtga aaggcccggc attgccgggc ctttctgcat tccaacgcca
    17701 ccccgcctta cgcggtgaac agcgccttca tcttcttcag cgcgttcgcc tcgacctggc
    17761 ggatgcgctc ggccgacacg ccgtactcgt cggccagctc ctgcagcgtc accttgctgt
    17821 cggcctccag ccagcggcgg cggatgatgt cgcgcgaacg ggcatccagc tcggccaggc
    17881 cttcgcgcag cagctgcatc tggttgtctt cgctgtcggc acgctcgtag gccatcgacg
    17941 ggtcttcgtc gttggcaacc aggaacgcgg ccggcgacgg cggcgcgtgt tcgttgtcct
    18001 cgtcggtcgg cgcatcgaaa ccgatatcgc gaccggacag gcgcgattcc atttccatga
    18061 cctcacgctc ggacacgttc aggtccttgg ccaccgcgct gacttcggcc gcgttcatcc
    18121 agcccaggcg cgtcttcgac ttgcgcaggt tgaagaacag cttgcgctgc gccttggtgg
    18181 tggcgacctt cacgatgcgc cagttcttca ggatgaactc gtgcatctcg gcacggatcc
    18241 agtgcacggc gaaggacacc aggcgcacgc ccatgtccgg gtcgaagcgc ttgaccgcct
    18301 tcatcaggcc gatgttgcct tcctggatca ggtcgcccag cgcaaggccg taaccgttgt
    18361 aaccgcgggc cacgtgcacc acgaagcgca ggtgcgaatg caccagctcg cgggcggcgt
    18421 ccagatcgtt gccgtcgcgg aagcgacggg ccaggtcctg ttcgtcatcg accgacagca
    18481 ccgggatctg gtgcacggca ccgatgtagg cgtccagcga accgagcgca ctgggaatcg
    18541 ggagattgtt tgccacaagg gcagtagagg tgttctggct cataggcacc catcttagca
    18601 gtccgggatt tggactgcta aaggaggaaa aagttccagc atcctattga tgcaacactg
    18661 gtcccaaaca gagccctacc gtagcgcgat ttgatgacag tggcgagcac gcttttcggg
    18721 attcacaatc ccttggaatt caagcaatta cccaccagaa accggccgat tccggtcaag
    18781 cggagctgaa cgggctgcct cgaaggccca ttcagggccg gggacgttgc ccgatgttca
    18841 ggcccagccg cccgcgggca ctcaaagcgc cgaacgaggc ggaagcgacc agtcaatcgg
    18901 ggcctggccg cggcgctgca ggtactcgtt ggccatcgaa aaatgccggc agccgaggaa
    18961 gccgcggtgg gccgacaacg gcgacggatg cggcgacttc agcacgcgat ggcggcgggt
    19021 gtcgatgacc ttgcccttct gctgcgcata ggcgccccag agcatgaaca ccaggccttc
    19081 gcgttcgcgg ttga
//
LOCUS       DAOKIP010000061        18904 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.061,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000061 DAOKIP010000000
VERSION     DAOKIP010000061.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 18904)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18904)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18904
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.061"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(4..414)
                     /gene="rsfS"
                     /locus_tag="QEL58_001834"
     CDS             complement(4..414)
                     /gene="rsfS"
                     /locus_tag="QEL58_001834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012480929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome silencing factor"
                     /protein_id="HDS1676312.1"
                     /translation="MSNQTQPQTIKVDLPSPPPSVPELLASVRQATEDLKAKDLVEID
                     VRGRSSVADYMIVVSGTSTRHVKSIADEVVRFAKNIDVMPLGVEGEREAEWVLVDLGD
                     VIVHVMLPRVREFYALERLWTVGDQPPPSDDEVA"
     gene            complement(473..1138)
                     /gene="nadD"
                     /locus_tag="QEL58_001835"
     CDS             complement(473..1138)
                     /gene="nadD"
                     /locus_tag="QEL58_001835"
                     /EC_number="2.7.7.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate-nucleotide adenylyltransferase"
                     /protein_id="HDS1676313.1"
                     /translation="MSLRIYYGGTFDPVHLGHLAIARAARDELQVAVRMLPAADPPHR
                     AVPGATAEQRCTMLSLAIGDEPGLLLDRRELDRAARFPGRPSYTVDTLRELRAELGPS
                     RPLAWLVGADSLLGLPSWHEWEALFGLAHFVVAERPGSPLRASVDGALGRALEGRWAD
                     NEQALFASPAGRILRLHHPLRDESASAVRSQIASGGPWRALLPPAVADYVAVHGLYRP
                     STP"
     gene            complement(1142..2179)
                     /locus_tag="QEL58_001836"
     CDS             complement(1142..2179)
                     /locus_tag="QEL58_001836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005414127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta"
                     /protein_id="HDS1676314.1"
                     /translation="MELRPEQLASQGADVALAPVYLIAGPETLRVLEAADAIRARARS
                     AGIGEREVFDADGRDFDWNQLDASFNAPSLFSARRLVEVRLPSGKPGKDGAEVISQFC
                     ANPAPDVVLMITANEWSKAHQGKWAEAVNRIGVLSVAWAIKPHELPDWIERRLRGKGL
                     RADPAAVQRLAERVEGNLLAAAQEIDKLALLADGQPLDVERMESLVADAARYDVFRLL
                     EATFSGQPPAVLRMLAGLRGEGEAVAALMPMVIRELLAGAGLARVQARGGNLAAEMKS
                     RGIWESRQAPYKRALQRHPEGKRWERFVAEAGLVDRIAKGRADGDAWLALERLLVAVA
                     EPRAVRLLARA"
     gene            complement(2189..2773)
                     /locus_tag="QEL58_001837"
     CDS             complement(2189..2773)
                     /locus_tag="QEL58_001837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019662114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676315.1"
                     /translation="MTRILLALVLALGLAGCGFHLRSKLMLPTDTAPVKVVSTAPYSE
                     LVKLLNRSLLASGAKLADEDSKEPSTQLQVLSESWGDLPIAIDSQGRAQEYSLRYAVI
                     FIFRREDGSELVPQQVIELSRDYVSPPTDATGTTTEREILADELRREMSASIIRRIDS
                     VVRAELEKGGSLSAPKAKPVEGAVPAEPVPAAKH"
     gene            complement(2910..5552)
                     /locus_tag="QEL58_001838"
     CDS             complement(2910..5552)
                     /locus_tag="QEL58_001838"
                     /EC_number="6.1.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008268353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucine--tRNA ligase"
                     /protein_id="HDS1676316.1"
                     /translation="MTSAETNAYDPQQVESAAQSFWDATRAFEVDETSDKPKYYCLSM
                     LPYPSGALHMGHVRNYTIGDVISRYKRMTGHNVLQPMGWDAFGLPAENAAIKNKTAPA
                     AWTYKNIDHMRSQLQSLGYAIDWSREFATCRPDYYVHEQRMFTRLMRKGLAYRRNAVV
                     NWDPVDQTVLANEQVIDGRGWRSGALVEKREIPQWFLRITDYAQELLDGLDELEGWPE
                     SVKTMQRNWIGRSEGLEIQFDVRDVDGGVLDPLRVFTTRPDTVMGVTFVSIAAEHPLA
                     LHAAKNNPELAAMLADLKQGGVSEAELETQEKRGMDTGLRALHPVTGEQVPVWVANFV
                     LMGYGTGAVMAVPGHDQRDNEVANKYGLPIKQVIALKDARSEEERSWDGSRWQDWYSD
                     KSRQTELVNSAEFDGLDFQGAFEALAERFERKAQGQRRVNYRLRDWGVSRQRYWGCPI
                     PVIYCAKCGAVPVPEEQLPVVLPEDVAFSGTGSPIKTDPEWRKTTCPECGGAAERETD
                     TFDTFMESSWYYARYTSPGARDAVDKRGNYWLPVDQYIGGIEHAILHLMYFRFYHKLL
                     RDARMVDSNEPARNLLCQGMVIAETYYRPNPDGSKDWINPADVEVQRDERGRITGATL
                     IADGQPVVVGGTEKMSKSKNNGVDPQAMVGKYGADTVRLFSMFAAPPEQSLEWNEAGV
                     DGMARFLRRLWAQVQKHAADGAAPALDAAALDASQKALRRKTHETIGKVGDDYGRRHS
                     FNTAIAAVMELMNALAKFEDGSGQGRAVRQEALQAIVLLLNPITPHASHALWQVLGHG
                     ETLLEDQPFPQADAGALVRDALTLAVQVNGKLRGTIEVAADAAREQVEALALAEPNAA
                     KFLEGLTVRKIIIVPGKIVNIVAA"
     gene            complement(5658..6257)
                     /locus_tag="QEL58_001839"
     CDS             complement(5658..6257)
                     /locus_tag="QEL58_001839"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014647949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF998 domain-containing protein"
                     /protein_id="HDS1676317.1"
                     /translation="MSVLRRDRWWGLLAAAIFVLAVVGFGATLDGYAQARHPVALLGA
                     RGVPHALGFNLLGFVLPGLLAAAVAECLRRRLAATAGWAPRVGSQMLLLAGLAFAAMG
                     LLPLDVEDLHGPASQLHASAWMVWVLGFVAGALLLGISHLRQGHGKALGGLAAACAVL
                     AAVAAFALQGVLPAPLAQRVAFACWSVWLALALPLSRAR"
     gene            6414..6680
                     /locus_tag="QEL58_001840"
     CDS             6414..6680
                     /locus_tag="QEL58_001840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676318.1"
                     /translation="MIHRILVAGALSLGLATTAHAGEFQCSAWIGAPSATAPPSSNFF
                     GGPTIKAPDARTAAELYQARISETTLPLKTGRWIVHHVRCDELT"
     gene            6823..7680
                     /gene="trxA"
                     /locus_tag="QEL58_001841"
     CDS             6823..7680
                     /gene="trxA"
                     /locus_tag="QEL58_001841"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005919399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin"
                     /protein_id="HDS1676319.1"
                     /translation="MTETTYVFDATTATFEAEVLQKSLQTPVLVDFWATWCGPCKTLG
                     PMLEKLAAEYNGAFELAKVDVDQEQQIAAAFQIRSVPTVFLVKGGQLVDGFPGAIPEG
                     QLREFLAQHGIVPADIGDATSEDEAPLDPQAQVDVLRAQIAAEPDKDELKLDLALALL
                     QIGGVDEAGTLIDGLPANLATDDRAVRARARLSFAAALKDAPAAEVLEARIAADGNDL
                     KARHLRGVQLLLGGHDEAALAQFLEMLRIDRSFEEGLPRKALIDAFNVISDEDLVGQY
                     RRRMASLLF"
     gene            7788..9494
                     /locus_tag="QEL58_001842"
     CDS             7788..9494
                     /locus_tag="QEL58_001842"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014038036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FecR domain-containing protein"
                     /protein_id="HDS1676320.1"
                     /translation="MGSCSCTSALPGLQTVTFVRSLSFAKRFQGAMLCALLLLLLPGV
                     AGAQDWNYRVRPGDTLWDLGGLYLKPSVRWQQLQQHNRIDNPYRLPPGQLLRFPISWL
                     RTEPAPARVLSVRGKVELSGADGSATRAILAGEQLRIGDTVQTEGESSATLEFADASR
                     LQLREYSRLRLDQLSRYGHTGMVDTRLRLQQGRASNRVTPARGPASRYIIDAPTATSS
                     VRGTVFRVSAGDAGQVGATEVLQGKVQVGNPHGQRLVRPGQAALSGSADAAPDAVSPL
                     LPAPQLHNDELRLAPLPTLLAWEPVAGAAHYRVEVVQSATPEILLYAATTTDTRLAIG
                     DLPPGQLRVLLRAVDAQGVEGLDASADFELSDQPPPPITVSPLHGQTVNSDRPRFRWS
                     QAPGARSSVLQIASEPTFRQPLQEQATHGTDLRLAQSLPPGQYFWRVASRDGNGHQGR
                     YGQALPLQLSNEPVDPALQPPEAAHGELTLRWQAGSEGQRYRVQVDRHGDFKAPLVDE
                     TVAEPQVSFKRPWSGTLHVRVQYIDDDGHAGEFSPAQQIKLACRLCYGAGGGAVLLWL
                     LL"
     gene            9491..11116
                     /locus_tag="QEL58_001843"
     CDS             9491..11116
                     /locus_tag="QEL58_001843"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014038037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHASE2 domain-containing protein"
                     /protein_id="HDS1676321.1"
                     /translation="MRRSPLPWSKRIALALLAGVLTVLASQSQWLWRQDESAYDALVG
                     SWDYRPDPSVLIVAIDEGSLQRIGQWPWPRSIHARLLDRLTDAGAERVALDLMLSEPD
                     RRDSRQDDALAAAIRRNGRVVLPVLAAPAAGDRMAEEMLPIPQIAASAAAIGHTDVEV
                     DGDGVARGLYLHAGIGQPHWPALGLALAGLPAGAVHGLPDPDPGVRSPYQWRRDDYVR
                     VRYAGPPERLPQVSYADVLDGHVDMAMLQGRRIVVGMTASGIAPRLLTPTTREFWMSG
                     SEYQANIASMLLQHKQIDVLPSAWQQAISAVLVALCVLLLGLRLPWLAALASLPAAPL
                     LSWLLLRSSDLWWAPATAMLGILLVLLAWAIWRISAWHRQANRDALTGLGNRLRFEQS
                     LQQECDAARRSGKPLSLALIDVDHFKRHNDLHGHQVGDRVLRDVARLIGAHARRPRDM
                     AARYGGDEFALVLPDTPAEGARLVIEDLIACVRALPPPGDGGGERITLTIGVFTRVPD
                     GELQPHDFVEGADTALYQAKANGRDGCVIDGGT"
     gene            11191..11643
                     /locus_tag="QEL58_001844"
     CDS             11191..11643
                     /locus_tag="QEL58_001844"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008267656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4442 domain-containing protein"
                     /protein_id="HDS1676322.1"
                     /translation="MNARLFRFGINLWPPFLFTGIHVTRVSPDYRQIDVELRMRPWNR
                     NYVGTHFGGSLFAMTDPFWMLGLLHILGRDYYVWDRAGAIDFLKPGRGTVRTSFRIDD
                     ALLDQLRAEAASGEKVLRWFSNDVVDESGEVVAQVRKQVYLRLKPHAR"
     gene            11691..12407
                     /locus_tag="QEL58_001845"
     CDS             11691..12407
                     /locus_tag="QEL58_001845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012511773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676323.1"
                     /translation="MRPFALAALLTPLSFAVHALDLPPVQFPALPAQAADAAGFVPGG
                     WMLESQVEGDLDQDGRADLVLVLRQQDPRNVIEHEGFGPSPYDSNPRILAIAWSRPSG
                     YVLAAQDHALIPRPENPVLSDPLEDGGISIQRGTLKVALFSFASAGSWSMGTTAFTFR
                     WQDGAFTLIGYDRDSVMRNSGQTESLSVNFSTRKVKQVEGSIESDTDRVRWQPLRSSR
                     RWTLETVGDGWAFDPLAGTG"
     gene            complement(12416..13729)
                     /locus_tag="QEL58_001846"
     CDS             complement(12416..13729)
                     /locus_tag="QEL58_001846"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005414134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676324.1"
                     /translation="MLKILRGLDWTLLGLLVLAIVVWCASRMWPIPESRLQAQQRLET
                     RLPATGRNGYAQLWTLGVDGLDARQREQTLAEDVRRWDADPHGNNVTQPQLASAPGGL
                     HSRPSASCGPAASGCLAQVRADPQRFAEAHAGHQLLHARLDQLAEADHFVSPFQPKGE
                     GIQVPLPTYGLVMDATSARALAYVQGDVDGALRGSCLGLQLGRRLVPGGSYLVESIVG
                     ASLVQANAQLLADILVELPADHPLPAECARAMQPLRADEQSLCRAMQGEYAMSQAAIE
                     TSAREFGGVLVLDRSSTLARVAGNLGWACGAAATAALEADRPLPVSSPPQRDFGCLSN
                     IMGCVLTDIAAPAYPAYSSRTQDAAAMLRLLGAQRWLRQQADDPADALRRLPEQFRSP
                     VRAPQLSADGSRLQVPRRSPSRSNQENAWLSVPLIVDTPSAAARD"
     gene            13806..14489
                     /locus_tag="QEL58_001847"
     CDS             13806..14489
                     /locus_tag="QEL58_001847"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF502 domain-containing protein"
                     /protein_id="HDS1676325.1"
                     /translation="MSLEAPALVPRPSLQRLFLTGLLTLLPIWLTWVVVKFVFVLLSG
                     ISSPLVVPLSEQIATSFPHYLGWVRAEWIQDTIALLATLLVILAVGVASRRVLGQRLL
                     RWVGAVIKRIPLASIIYDSAKKLLDMLQTEPGSTQRVVLIDFPHRDMKSVGLVTRVIK
                     EHGTDRELAAVYVPTTPNPTSGYLEIVPVELLTPTDWTVDQAMSFIISGGAVAPSSVP
                     FTRAGDRAE"
     gene            14486..15271
                     /locus_tag="QEL58_001848"
     CDS             14486..15271
                     /locus_tag="QEL58_001848"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="queuosine precursor transporter"
                     /protein_id="HDS1676326.1"
                     /translation="MTPAPIERPLQDRAVLLFIVLAAFFCGNAVLAELIGVKIFALED
                     TLGIDPLNWNLFGQTGSLSFTAGTLLWPVVFIMTDTINEFFGKRGVRFISWLAVVLIS
                     YGFLFAFAAISLAPASWWVTSMDAHGVPDYQAAFAAVFGQGMWTIAGSLVAFLLGQLI
                     DVAVFHRIRQATGERHVWLRATGSTAISQVVDSFVVIWIAFVLGPQHWPTSLFLAVSS
                     VNYIYKMGFAIALIPLLYLMRRAITGYLGVERAAALRAAAAAD"
     gene            15366..17306
                     /locus_tag="QEL58_001849"
     CDS             15366..17306
                     /locus_tag="QEL58_001849"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014038043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF885 family protein"
                     /protein_id="HDS1676327.1"
                     /translation="MPHPTRVLAAAIAALFLFSAVPPAEAAKKKASRPAAAQTRQAAK
                     PKAKPARATAPARGSSARRATPRPVAPARAVPKQVQLERLYDEYWDASMRLNPLQATF
                     QGEPRYNDQLPNILSAAWRQQSHDFTTQWLGKVEKLGSDGLQGQDLLSYEIFVRDARA
                     SLAAERYPSWMMPISQYYNIGSIMAILGAGAGAQPFNTVQDYDTWSRRSLGIPELFDQ
                     AIDNMRQGMKAGVVQPRDLMEKVLPQLDAVIKPTAEESIFWSPIRTMPDTIAAEDKAR
                     ISAEYKRMIELRIMPAYRALRGFIATEYLPATRASSGLGALPDGQAWYANLIVQTTAS
                     NQSAAQLHALGEQRAQELQAQIATVMKDAKLRGTPAKLLRSMRNDRQFQYGDANALIN
                     RYRQVQQQVNARLPQVLDTLPKAPLEVRAVEPERALTAAAAAYQPSPGEQPGVLYVNT
                     RDLASRKRWNVPVQYLHEAIPGHHVQLGLQQELAKLPRFRRLGGDLAFVEGWGLYAET
                     LGEDLGIYTDPYDRIGYLYSRLLRAARVVADTGVNAQGWSKQQAVAYLQKTVDMSSDD
                     ANAEVERIMAQPGQALSNVAGLTTIVALRDKARARQGAAFDLRRFHAELLKDGSMPLD
                     VLDRKMERWMAEPASATPAPSP"
     gene            17323..18393
                     /locus_tag="QEL58_001850"
     CDS             17323..18393
                     /locus_tag="QEL58_001850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012480939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-lactamase family protein"
                     /protein_id="HDS1676328.1"
                     /translation="MRPAVVLLVAVLGLLPLASSAAPVLTPPDAGIDGLMQAYDGQVP
                     GAAVLVLHDGQPVFRRGYGLAVVEDGTPVTAASNFRLASVSKQFTAAAVLLLVEDGRL
                     GLDQTARQWLPELPPAAAAITIRQLLSHTSGLLDYEDLMDPADPRQVHDADVLALLSR
                     EDRLNFTPGTQYRYSNSGYALLALIAGRASGQDFAAFLQQRIFRPLGMAHTVAHQDGV
                     DTIATRAYGYSWLDGRWQRTDQSTTSAVLGDGGIYSSLDDLARWDAALYDDRLLSKAS
                     RRAMFSPATTTTEPDVPHYGFGWRLNGAVQWHSGESIGFRNVIVRHPEKHLTVIVLTN
                     RNDPEPYPLALKIAQRWLDTLQ"
     gene            18390..18794
                     /locus_tag="QEL58_001851"
     CDS             18390..18794
                     /locus_tag="QEL58_001851"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010482918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HDS1676329.1"
                     /translation="MTAASDALLGIHHAALICSDYARSKDFYVRILGLRVLAENHRAA
                     RDSWKLDLALPDGGQLELFSFPSPPPRPSRPEAQGLRHLAFRVAALEPFIQHLAAHGV
                     ACEPIRVDEYTGRRFTFFADPDDLPLELYEVG"
BASE COUNT         2965 a         6736 c         6251 g         2952 t
ORIGIN      
        1 ggctcaggcc acttcgtcgt cgctgggcgg cggctggtcg ccgaccgtcc acagccgttc
       61 aagcgcgtag aactcgcgca cgcgcggcaa catcacgtgg acgatgacgt cacccagatc
      121 aaccagcacc cactcggctt cgcgctcgcc ttcaacgccc agcggcatca cgtcgatgtt
      181 cttggcgaaa cgcacgactt cgtcggcaat cgacttgacg tggcgggtcg aagtacccga
      241 aaccacgatc atgtaatcgg caacgctgga ccggccgcgc acgtcgatct cgaccaggtc
      301 cttggccttc aggtcttcgg tggcttggcg gacgctggcc agcagttccg gcacggacgg
      361 cggcgggctg ggcagatcga ccttgatggt ctggggctgg gtctggttgc tcaaagtgga
      421 tcgactcgat aaacgtgggg gcgattatac gggcaagccg cagctgcggc attcacggcg
      481 tggaggggcg gtacagcccg tggacggcaa cgtagtcggc cacggcgggc ggcagcagcg
      541 cacgccaggg cccgccggag gcgatctgcg agcgcactgc gctggctgat tcgtcacgca
      601 gtgggtggtg caggcgcagg atgcggccgg ccgggctggc gaacagcgcc tgttcgttgt
      661 cggcccagcg cccttccagg gcacggccca gcgcgccgtc aaccgaggcc cgcagcgggc
      721 tgcccgggcg ttcggccacc acgaaatggg ccagcccgaa cagggcctcc cattcgtgcc
      781 agctgggcag gcccagcagg ctgtcggcac cgaccagcca ggccagcggc cggctcggcc
      841 ccagttcggc gcgcagctcg cgcagggtat cgacggtgta ggacgggcga ccggggaaac
      901 gcgccgcacg gtccagctcg cggcggtcca gcagcaggcc gggctcgtcg ccaatggcca
      961 gcgacagcat ggtgcagcgc tgctcggcgg tcgcaccggg taccgcgcga tgcggcgggt
     1021 cggccgccgg cagcatgcgc accgccacct gcagttcatc gcgggcggca cgcgcgatcg
     1081 ccaggtgccc gaggtgcacc ggatcgaagg tgcccccgta atagatccgc aggctcatcg
     1141 ctcaggcccg cgccagcagg cgcaccgcac gcggttcggc cacggccacc agcaggcgct
     1201 ccagcgccag ccaggcatcg ccgtcggccc gccccttggc gatgcggtcg accagcccgg
     1261 cttcggccac gaagcgctcc cagcgcttgc cttccgggtg gcgctgcagc gcacgcttgt
     1321 acggcgcttg gcgcgactcc cagatgcccc gcgacttcat ttcggcggcc aggttgccgc
     1381 cccgcgcctg cacccgggcc aggccggcac cggccagcag ctcgcggatc accatcggca
     1441 tcagtgcggc caccgcttcg ccttcgccgc gcaggccggc cagcatgcgc agcaccgccg
     1501 gcggctggcc ggagaacgtc gcctccagca gccggaacac gtcgtagcgg gcggcatcgg
     1561 ccaccagcga ttccatccgt tccacatcca gcggctggcc atcggccagc aatgccagct
     1621 tgtcgatctc ctgggcagcg gccagcaggt tgccttccac ccgctcggcc agtcgctgca
     1681 cggcggccgg gtcggcccgc aggcccttgc cacgcaggcg gcgctcgatc cagtccggca
     1741 gttcgtgcgg cttgatcgcc caggccaccg acagcacgcc gatgcggttg accgcctcgg
     1801 cccacttgcc ctggtgggcc ttgctccatt cgttggcggt gatcatcagc accacgtccg
     1861 gcgccgggtt ggcgcagaac tggctgatca cctcggcgcc gtccttgccc ggcttgccgc
     1921 tgggcaggcg cacctcgacc aggcgacggg cgctgaacag gctcggcgca ttgaagctgg
     1981 cgtcaagctg gttccagtcg aaatcgcggc catcggcgtc gaacacctcg cgctcgccga
     2041 tcccggcact gcgcgcacgc gcgcggatgg cgtcggccgc ctccagcacg cgcagcgtct
     2101 ccgggccggc aatcagatag accggcgcca gtgcaacatc agcgccctgg ctggccagct
     2161 gctccggacg cagttccatc ttcgctgctc agtgcttggc tgcgggaacc ggctcggccg
     2221 gcaccgcgcc ttcgacgggc ttggccttcg gtgccgacag gctgcccccc ttctcaagct
     2281 cggcgcggac cacgctgtcg atgcggcgga tgatcgatgc ggacatttcc cggcgcagct
     2341 catcggccag gatctcgcgc tcggtggtgg taccggtggc gtcggtcggc ggcgacacgt
     2401 agtcacgcga cagctcgatc acctgctgcg gcaccagctc gctgccgtct tcgcgacgga
     2461 agatgaagat caccgcgtaa cgcaggctgt attcctgtgc gcggccctgc gaatcgatgg
     2521 cgatcggcag gtcaccccag ctttcggaca gcacctgcag ctgggtactg ggttccttgc
     2581 tgtcttcatc ggccagcttg gcgccggagg cgagcaggct gcggttgagc agcttgacca
     2641 gttcgctgta cggcgcggtg gagactacct tcaccggcgc ggtgtcggtc ggcagcatca
     2701 gcttgctgcg cagatggaaa ccgcagccgg caaggccgag ggcaagaaca agggcaagca
     2761 ggattcgggt catgtagaca gtctggcgga gccgggcgat cacggcaaca cacagcctgc
     2821 ccgaagccgc gtgaatgcag ggccatcaag tgcatggccc ggcaccggaa tggcaccggc
     2881 caccccgcag gtggccggtg cggggtacat caggcggcga cgatgttcac gatcttgccc
     2941 ggaacgatga tgatcttgcg caccgtcagg ccttccagga acttggccgc gttcggctcg
     3001 gccagggcca gtgcttcgac ctgctcgcgc gcggcatcgg ccgccacctc gatggtgcca
     3061 cgcagcttgc cgttgacctg tacggccagg gtcagcgcat cgcgcaccag cgcaccggca
     3121 tcggcctgcg ggaacggctg gtcttccagc agcgtctcgc catggcccag cacctgccac
     3181 agggcatggc tggcgtgcgg ggtgatcggg ttcagcagca gcacgatggc ctgcagtgct
     3241 tcctggcgca ccgcacggcc ctgcccgctg ccgtcctcga acttggccag cgcgttcatc
     3301 agctccatca ccgcggcaat ggcggtgttg aagctgtggc ggcggccgta gtcgtcgccg
     3361 accttgccga tggtttcgtg ggtcttgcgg cgcagcgcct tctggctggc atccagcgcg
     3421 gcagcgtcca gcgccggggc ggcaccgtcg gcagcgtgct tctgcacctg ggcccacagg
     3481 cggcgcagga agcgggccat gccatccacg ccggcctcgt tccactccag cgactgctcg
     3541 ggcggcgcgg cgaacatcga gaacaggcgc acggtgtcgg cgccgtactt gccgaccatc
     3601 gcctgcgggt ccacgccgtt gttcttcgac ttggacatct tctcggtgcc accgaccacc
     3661 accggctggc cgtcggcgat cagggtggcg ccggtgatgc ggccgcgttc atcgcgctgc
     3721 acttccacat cggccgggtt gatccagtcc ttcgagccgt ccgggttcgg gcggtagtag
     3781 gtctcggcga tcaccatgcc ctggcacagc aggttgcgcg ctggctcgtt gctgtcgacc
     3841 atccgcgcgt cgcgcagcag cttgtggtag aagcggaaat acatcaggtg caggatcgcg
     3901 tgctcgatgc cgccgatgta ctggtcgacc ggcagccagt agttgccgcg cttgtcgacg
     3961 gcatcgcgcg cacccggcga ggtgtagcgg gcgtagtacc agctcgactc catgaaggtg
     4021 tcgaaggtat cggtctcgcg ctcggccgca ccgccgcact ccgggcaggt ggtcttgcgc
     4081 cattccgggt cggtcttgat cggcgaacca gtgcccgaga acgccacgtc ttccggcagc
     4141 accaccggca gctgctcttc cggcaccggc accgcaccgc acttggcgca gtagatcacc
     4201 ggaatcgggc agccccagta gcgctggcgg ctcacgcccc agtcgcgcag gcggtagttg
     4261 acgcggcgct ggccctgggc cttgcgctcg aaacgctcgg ccagcgcttc gaaggcaccc
     4321 tggaagtcca ggccgtcgaa ctcggccgaa ttgaccagtt cggtctgccg gctcttgtcg
     4381 ctgtaccagt cctgccagcg gctgccgtcc cagctgcgct cttcttcgct gcgcgcatcc
     4441 ttcagcgcga tcacctgctt gatcggcagg ccatacttgt tggccacttc gttgtcgcgc
     4501 tggtcatggc ccgggacggc catcaccgcg ccggtgccgt agcccatcag cacgaagttg
     4561 gcgacccaga ccggcacctg ctcgccggtg accgggtgca gggcacgcag gccggtgtcc
     4621 atgccgcgct tttcctgggt ttccagttca gcctcggaca cgccgccctg cttcaggtcg
     4681 gccagcatcg cggccagctc cgggttgttc ttcgccgcgt gcagcgccag cgggtgctcg
     4741 gcggcgatcg acacgaaggt cacgcccatc acggtgtccg ggcgggtggt gaacacgcgc
     4801 agcggatcca gcacaccgcc gtccacgtca cgcacgtcga actggatttc caggccttcg
     4861 gaacggccga tccagttgcg ctgcatggtc ttgaccgatt ccggccagcc ctccagctcg
     4921 tccaggccgt ccagcagttc ctgggcgtag tcggtgatgc gcaggaacca ctgcgggatc
     4981 tcgcgcttct cgaccagggc gccggaacgc cagccgcggc cgtcgatcac ctgctcgttg
     5041 gccagcacgg tctggtcgac cgggtcccag ttcaccaccg cgttgcggcg gtaggccagg
     5101 cccttgcgca tcagccgggt gaacatgcgc tgctcgtgga cgtagtagtc cggacggcag
     5161 gtggcaaact cgcgcgacca gtcgatggca tagcccagcg actgcagctg gctgcgcatg
     5221 tggtcgatgt tcttgtaggt ccacgccgcc ggcgcggtct tgttcttgat cgcggcattt
     5281 tccgccggca ggccgaacgc gtcccagccc atcggctgca gcacgttgtg cccggtcatg
     5341 cgcttgtagc ggctgatcac gtcaccgatg gtgtaattgc gcacgtgccc catgtgcagc
     5401 gcaccggacg ggtacggaag catcgacagg cagtagtact tcggcttgtc cgaagtctcg
     5461 tcgacctcga aggcacgggt ggcatcccag aagctctggg cggcggattc aacctgctgc
     5521 gggtcgtagg cgttggtttc agcgctggtc atggaacacg cggatgcggc ggcaaagcgg
     5581 tacagcgtac cgcagtgcgg caaacgtctc caatcctgac tgccgcccgc aggcgccgcc
     5641 cacgcgtgga gaccgtctca gcgagcccgc gacagaggca gggccagggc cagccagacc
     5701 gaccagcagg cgaaggccac gcgctgtgcc agtggcgccg gcaacacgcc ctgcagggca
     5761 aaggccgcca ccgccgccag tacggcgcag gcggccgcca gcccgccgag ggccttgcca
     5821 tgaccctggc gcaggtggga gatgcccagc agcagggcgc cggcaacgaa tcccagcacc
     5881 cagaccatcc aggcgctggc gtgcagctgg ctggccggtc catgcaggtc ttccacgtcc
     5941 aacggcaata gacccatcgc cgcaaaggcc aggccggcca gcagcagcat ctggctgccc
     6001 acccgcggcg cccagccggc cgtcgcggca aggcggcggc gcaggcactc ggccaccgcc
     6061 gccgccagca ggccgggcag cacgaagccc agcagattga accccagcgc atgcggcacg
     6121 ccgcgtgcac ccagcagggc caccgggtgg cgcgcctgcg cgtagccgtc cagcgtcgcg
     6181 ccgaaaccca ccacggccag gacgaagatg gctgcagcaa gcagccccca ccaacgatca
     6241 cgccggagca cggacatcgc gcggattcac caagaagcgg aagaccggcc attgtcgcgg
     6301 caacgatgcg gggcgccaag cggcggcaca tttcagaatc attcgatatc cgcgcaggca
     6361 tgccgcgcgc gatgctcggg gcatggcagt cccgccatgc agggagacct cccatgatcc
     6421 atcgcatcct cgtcgccggc gcgctcagcc tgggcctggc caccacggcc cacgccggcg
     6481 agttccagtg ctcagcctgg atcggcgcgc ccagcgccac ggcaccgccg agcagcaact
     6541 tcttcggggg ccccaccatc aaggcgcccg acgcccgcac cgcagctgag ctgtatcagg
     6601 cccgcatctc cgaaacgacc ctgccgctga agaccgggcg ctggatcgtg catcacgtcc
     6661 gctgcgatga gctgacgtaa cggctggcgc atcgagggca ggccccgcgc ctgcccctct
     6721 cccgcccgga atggccatgg ttggtggcgc caccaaaggg ttgagtctga catcgatcgt
     6781 caccatagaa tcggtctcca gatgccagac gatgcctccc ccatgaccga gacgacctac
     6841 gtattcgacg ctaccaccgc gaccttcgag gccgaagtcc tgcagaagtc gctgcagacg
     6901 ccggtgctgg tcgatttctg ggccacctgg tgcgggccgt gcaagaccct cggcccgatg
     6961 ctggaaaagc tggcagccga atacaacggc gccttcgaac tggccaaggt cgatgtcgac
     7021 caggaacagc agatcgcggc ggcgttccag atccgctcgg taccgaccgt gttcctggtc
     7081 aagggtggcc agctggtgga cggcttcccc ggcgcgattc cggaaggcca gctgcgcgag
     7141 ttcctggccc agcacggcat cgtgcccgcc gatatcggcg atgccacctc cgaggacgaa
     7201 gcaccgctgg acccgcaggc gcaggtggac gtgctgcgcg cgcagatcgc cgccgagccg
     7261 gacaaggatg agctcaagct cgacctggcc ctggccctgc tgcagatcgg cggcgtggat
     7321 gaagccggca cgctgatcga cggcctgccc gccaacctgg ccaccgatga ccgcgccgtc
     7381 cgtgcccgtg cccgcctgtc cttcgcggcc gcgctgaagg atgcccccgc ggccgaagtg
     7441 ctggaggcgc gcatcgccgc cgacggcaat gacctcaagg cccgccacct gcggggggtt
     7501 cagctgctgc tcggcggcca tgacgaggcc gcactggcac agttcctgga aatgctgcgg
     7561 atcgatcgca gcttcgagga agggttgccg cgcaaggccc tgatcgatgc cttcaatgtg
     7621 atctccgacg aggacctcgt tggccagtac cgccgcagga tggcctctct gctgttctga
     7681 acgggagccc ccttcgttca gaatccctgc actgaacgcg ggcaataatg cgcgagatgg
     7741 cggccgttcg gccgccacga tccgttcggg gggatgaggt cggggccatg gggtcttgca
     7801 gctgcacctc cgcattgccg ggattgcaaa ctgtgacctt cgtccgctcg ctgtcgttcg
     7861 ccaagcgctt ccagggcgcc atgctgtgtg cccttctcct cctgctgctg ccaggcgtgg
     7921 ccggcgccca ggactggaat taccgggtcc gtcccggcga taccctgtgg gatctgggcg
     7981 gcctgtacct gaagccctcg gtacgctggc aacagctgca gcaacacaac cgcatcgaca
     8041 atccctatcg gttgccgccc ggccagctgc tgcgcttccc gatcagctgg ctgcgtacag
     8101 agcctgcgcc ggcccgcgtg ctgtcggttc gcggcaaggt cgagctgtcc ggcgccgatg
     8161 gcagcgccac gcgcgcgatc ctggcgggcg agcagctgcg tatcggcgac accgtgcaga
     8221 ccgagggcga atccagcgcc accctcgagt tcgccgacgc ctcgcgcctg cagctgcgcg
     8281 agtactcacg gctgcgcctg gaccagctca gccgctatgg ccacaccggc atggtggaca
     8341 cccgcctgcg cctgcagcag ggacgcgcca gcaaccgggt cacgcccgcc cgcggcccgg
     8401 catcgcgcta catcatcgat gcgcccaccg cgaccagcag cgtacgcggc accgtgttcc
     8461 gggtcagcgc cggcgacgcc ggccaggtcg gtgcgaccga ggtcctgcag ggcaaggtgc
     8521 aggtcggcaa cccgcacgga caacgcctgg tccggccggg ccaggccgcg ctcagcggca
     8581 gcgccgacgc cgcaccggac gcggtctccc cgctgctgcc ggcaccgcag ctgcacaacg
     8641 acgaactgcg cctggcgccg ctgccgacgc tgcttgcctg ggagcccgtt gcgggtgccg
     8701 cgcattaccg cgtggaagtg gtgcagtccg caaccccgga aatcctgctg tatgccgcca
     8761 ccaccaccga tacccgcctg gcgatcggcg acctgccgcc gggccagctg cgcgtcctgc
     8821 tgcgcgcggt cgatgcgcag ggcgtggaag gcctcgacgc cagcgccgat ttcgaactca
     8881 gcgaccagcc gccaccgccg atcaccgtat cgccgctgca cgggcagacg gtcaacagcg
     8941 accgcccgcg cttccgctgg agccaggccc ccggcgcgcg cagcagtgtg ctgcagatcg
     9001 cctccgagcc cacgttccgg cagccactac aggaacaggc gacccatggc accgacctgc
     9061 gcctggcgca gtccctgccg ccaggccagt acttctggcg cgtcgcgtcg cgcgatggca
     9121 atggccacca gggccgctac ggccaggcac tgcccctgca gctgagcaat gaaccggtcg
     9181 acccggcgct gcaaccgccg gaagcggccc atggtgagct gaccctgcgc tggcaggccg
     9241 gcagcgaagg ccagcgctac cgggtgcagg tcgatcgcca tggcgacttc aaggcaccgc
     9301 tggtcgacga aaccgtggcc gagccgcagg tcagtttcaa gcggccgtgg agcggcaccc
     9361 tgcatgttcg cgtgcagtac atcgacgacg acggccatgc cggcgagttt tcgcccgccc
     9421 agcagatcaa gctggcgtgc cgcctgtgct acggcgccgg cggcggcgcc gtgctgctct
     9481 ggttgctgtt gtgaggcgtt cgccactgcc gtggagcaaa cggatcgcac tggccctgct
     9541 ggccggtgtg ctgacggtgc tggccagcca gagccaatgg ctgtggcggc aggacgagag
     9601 cgcctacgac gcactggtcg gtagctggga ttaccgcccc gaccccagcg tgctgatcgt
     9661 ggccatcgac gaaggcagcc tgcaacgcat cggccagtgg ccctggccgc gctcgataca
     9721 cgcgcgcctg ctggaccgtt tgaccgatgc aggtgccgag cgcgtcgccc tggacctgat
     9781 gctgtccgaa ccggatcggc gcgacagccg ccaggacgat gcgctggcgg cggccatccg
     9841 ccgcaatggc cgggtggtgc tgccggtact ggccgcgccc gccgcgggtg accgcatggc
     9901 cgaggaaatg ctgccgatcc cgcagatcgc ggccagcgcc gcagccatcg gccacaccga
     9961 tgtcgaagtg gatggcgacg gtgtcgcccg cggcctctac ctgcacgccg gcatcggcca
    10021 gccacattgg cccgcgctgg gcctggcgtt ggccggcctg ccggcaggcg ccgtgcacgg
    10081 cctgcccgac cccgaccccg gagtccgctc gccctatcaa tggcggcgcg acgactatgt
    10141 gcgcgtgcgc tacgctggcc cgccggagcg actgccgcag gtgtcctacg ccgatgtact
    10201 cgacggccac gtcgacatgg cgatgctgca gggccgccgc atcgtggtcg gcatgaccgc
    10261 cagcggcatc gcgccgcgcc tgctgacgcc gaccacgcgc gaattctgga tgagcggcag
    10321 cgagtaccag gccaacatcg cttcgatgct gctgcagcac aagcagatcg atgtactgcc
    10381 ctcggcatgg caacaggcca tcagcgcggt gctggtcgca ctgtgcgtcc tcctgctcgg
    10441 cctgcgcctg ccctggcttg cggcgctggc gtcgttgccg gcggccccat tgctgagctg
    10501 gttgctgctg cgcagcagcg atctgtggtg ggcgccggcc accgcgatgc tgggcattct
    10561 gctggtgctt ctggcctggg cgatctggcg gatctcggcc tggcaccgcc aggccaaccg
    10621 cgatgcgctg accggcctgg gcaatcgcct gcgcttcgag cagtcgctgc agcaggaatg
    10681 cgacgccgcg cggcgcagtg gcaagccgct gagcctggcg ttgatcgacg tggaccattt
    10741 caagcgtcac aacgacctcc acggccacca ggtgggtgat cgcgtgctgc gcgatgtcgc
    10801 ccgcctgatc ggcgcgcatg cgcggcgccc gcgcgacatg gccgcacgct atggcggcga
    10861 cgaattcgcg ctggtgctgc cggatacacc ggccgagggc gcgcgcctgg tgatcgaaga
    10921 cctgatcgcc tgcgtgcggg cactgccgcc cccgggtgat ggcggcggcg agcggatcac
    10981 cctcaccatt ggtgtgttca cccgcgtacc cgacggcgaa ctgcagccgc atgacttcgt
    11041 ggagggcgcc gacaccgccc tgtaccaggc caaggccaat ggccgcgacg gatgtgtgat
    11101 cgacggcggg acgtgaatcc ccgccacccg gtgcaacata cgcatgcgaa tggttagact
    11161 gtaggcctcg ccctgcgccc ccggacccgc atgaacgccc gcctgttccg cttcggcatc
    11221 aatctttggc cgccgttcct gttcaccggc atccacgtca cccgggtctc gccggactac
    11281 cggcagatcg acgtcgaact gcgcatgcgg ccctggaacc gcaactacgt cggcacccac
    11341 ttcggcggca gcctgttcgc gatgaccgat ccgttctgga tgctcggcct gctgcacatc
    11401 ctcggccgcg actactacgt gtgggaccgc gccggtgcga tcgatttcct caagcccggc
    11461 cgcggcaccg tgcgaacctc gttccgcatc gatgacgcgc tgctggacca actgcgcgcc
    11521 gaagcggcca gcggcgaaaa ggtgctgcgc tggttcagca acgacgtggt tgatgaaagc
    11581 ggtgaagtgg tcgcgcaggt gcgcaagcag gtctacctgc ggctgaagcc acacgcacgc
    11641 tgatcggctg caacggcgct atcctctgcc tccccgccat ggaggctccg atgcgcccgt
    11701 tcgcccttgc tgcactgctg accccgctgt ccttcgccgt ccacgcactg gatcttccgc
    11761 cggtgcagtt cccggcgctg ccggcgcagg cggccgatgc tgccggcttc gtgcccggtg
    11821 gctggatgct ggagtcacaa gtggaaggcg acctcgacca ggatgggcgc gcggacctgg
    11881 tgctggtgtt gcgccagcag gacccgcgca acgtcatcga gcacgaggga ttcggtccgt
    11941 cgccgtatga cagcaacccc cgcatcctcg ccatcgcctg gtcacgcccg tccggctatg
    12001 tgctggccgc acaggaccat gcgctgatcc cgcgcccgga gaatccggta ctcagcgatc
    12061 cgctcgagga cggcgggatc agcatccagc gtggcaccct gaaggtggcg ctgttttcgt
    12121 tcgccagtgc aggcagttgg tcaatgggca cgactgcatt cactttccgc tggcaggacg
    12181 gcgccttcac cctgatcggc tacgaccgcg actcggtgat gcgcaattcc gggcagaccg
    12241 aatcattgag cgtcaacttc tccacccgca aggtgaaaca ggttgaaggc agcatcgagt
    12301 ccgataccga ccgcgtgcgc tggcaaccgt tgcgcagcag tcggcgctgg acgcttgaaa
    12361 cggttggcga tggctgggca ttcgatccgc tggccggcac cggttgaacc cgacctcaat
    12421 cgcgcgcggc ggctgaaggc gtatccacga tcagcggcac cgacagccag gcgttttcct
    12481 ggttgctgcg cgacggggag cggcgtggca cctgcaggcg gctgccatcg gccgacagct
    12541 gcggggcgcg caccggcgag cggaactgtt ccggcaggcg ccgcagcgcg tctgccgggt
    12601 catccgcctg ctgccgcagc cagcgctgcg ccccaagcag ccgcagcatc gcagcggcgt
    12661 cctgggtacg cgacgaatag gcgggatagg ccggtgcggc gatatccgtc agcacgcaac
    12721 ccatgatgtt cgacaggcaa ccgaagtcac gctgtggcgg cgacgacacg ggcaacggac
    12781 gatccgcctc cagtgccgcc gtcgctgccg cgccgcaggc ccagccgagg ttgccggcca
    12841 cgcgtgccag ggtgctgctg cggtccagta ccagcacgcc gccgaattcc ctcgccgagg
    12901 tttcgatcgc cgcctggctc atcgcgtact cgccctgcat cgcccggcac aggctctgtt
    12961 cgtcggcccg cagcggctgc atcgcccgtg cgcattccgc gggcaacggg tggtcggccg
    13021 gaagctcgac cagaatgtcg gccagcagct gtgcattggc ctggaccagg ctggcaccga
    13081 cgatgctctc gaccagatag ctgcccccgg gcaccagccg gcgccccagc tgcagcccca
    13141 ggcaactgcc gcgcagggcg ccatcaacat cgccctgtac gtaggccagc gcgcgggcgc
    13201 tggtggcatc catcaccagg ccataggtcg gcaggggcac ctggatgcct tcgcccttcg
    13261 gctggaacgg cgacacgaag tggtccgcct cggccagctg gtccaggcgc gcatgcagca
    13321 gctggtgacc ggcgtgggct tcggcaaacc gctgcggatc ggcgcgcacc tgcgccaggc
    13381 agccgctggc ggccgggccg cagctggcgg atgggcgcga atgcaagccg ccgggggcgc
    13441 tggccagctg gggctgtgtg acgttattgc cgtgcgggtc ggcgtcccag cgccgcacgt
    13501 cttcggccag cgtctgctcg cgctggcggg catccaggcc gtcaacgcca agcgtccaca
    13561 actgcgcata gccattgcgc ccggttgccg gcaggcgggt ttccagccgc tgctgcgcct
    13621 gcagccgcga ttcggggatg ggccacatgc gcgaggcaca ccacacgacg atggccagca
    13681 ccagcaggcc cagcagggtc caatccaacc cacgcagtat cttcaacaca gcgtcccttc
    13741 catgtgccgt tgccgcagtt gattgcccag cgtaatcgac ccgcggtgac cgctacaatg
    13801 cgcgcatgtc gctcgaagcc cccgccctgg ttccccgccc ctccctgcag cgcctgttcc
    13861 tgaccggcct gctgaccctg ctgccgatct ggctgacctg ggtcgtggtc aagttcgtgt
    13921 tcgtgctgct gtcgggtatt tccagcccgc tggtggtacc gctgtccgag cagatcgcga
    13981 ccagcttccc gcactacctc ggctgggtgc gcgccgaatg gatccaggac accatcgccc
    14041 tgctggccac gttgctggtg atcctggcgg tgggcgtggc cagtcgccgt gtactcggcc
    14101 agcgcctgct gcgctgggtg ggtgcggtca tcaagcgcat tccgctggcc agcatcatct
    14161 acgacagcgc caagaagctg ctggacatgc tgcagaccga gccgggcagc acccagcgcg
    14221 tggtgctgat cgactttccg caccgtgaca tgaagtcggt cgggctggtt acccgcgtga
    14281 tcaaggaaca cggcaccgac cgtgaactgg ccgcggtgta cgtgccgacc acgccgaacc
    14341 cgacgtccgg ctatctggaa atcgtgccgg tggaactgct gacgcccacc gactggaccg
    14401 tcgaccaggc catgagcttc atcatttccg gcggcgccgt ggcaccgtcc agcgtgccgt
    14461 tcacccgcgc cggcgaccgc gccgaatgac cccggcgccg atcgagcgcc cgctgcagga
    14521 ccgcgcggtc ctgctgttca tcgtgctggc cgcgttcttc tgcggcaatg cggtgctggc
    14581 cgagctgatc ggggtgaaga tcttcgccct ggaagacacg ctggggatcg atccgctgaa
    14641 ctggaacctg ttcggccaga ccggctcgtt gagtttcacc gccggcaccc tgctgtggcc
    14701 ggtggtgttc atcatgaccg acaccatcaa cgagttcttc ggcaagcgcg gcgtgcgctt
    14761 catctcgtgg ctggcggtgg tgctgatcag ctacggcttc ctgttcgcct ttgcggccat
    14821 ttcgctggcg ccggccagct ggtgggtcac ctcgatggac gctcacggcg tgccggacta
    14881 ccaggccgca tttgctgcgg tgttcggcca gggcatgtgg accatcgccg gctcgctggt
    14941 cgcgttcctg cttggccagc tgatcgacgt ggcggtgttc caccgtatcc gccaggccac
    15001 cggcgaacgc catgtgtggc tgcgcgcgac cggctcgact gcgatctcgc aggtggtgga
    15061 cagtttcgtg gtgatctgga tcgccttcgt gctcggcccg cagcactggc cgacgtcgct
    15121 gttcctggcc gtcagcagcg tcaactacat ctacaagatg ggctttgcga tcgccttgat
    15181 ccccctgctg tacctgatgc gacgtgcgat caccggttat ctgggcgttg aacgcgcggc
    15241 cgcgttgcgc gcggctgcgg cggctgactg aagccccagc gaccgccagc tgactgcgcc
    15301 ttcacgctgg ccgtacgcgg ccggatcgtg caagctccac ggtctgtgtt ccacggaagc
    15361 tcctgatgcc gcatcccacc cgcgtcctgg ccgccgccat cgccgcgttg ttcctgttca
    15421 gtgccgtacc gccggccgaa gcagcgaaga agaaggccag ccgccctgcc gccgcgcaga
    15481 cccgccaggc ggccaagccc aaggccaagc ccgcccgcgc caccgcgccg gcccgcggca
    15541 gttcggcgcg ccgcgccacg ccacgtcccg tagcccccgc gcgcgccgta cccaagcagg
    15601 tgcagctgga gcgcctgtac gacgaatact gggatgcctc gatgcggctg aacccgctgc
    15661 aggcgacctt ccagggcgag ccacgttaca acgaccagct gcccaacatc ctgtcagccg
    15721 cctggcgcca gcagtcgcac gacttcacca cgcaatggct gggcaaggtc gagaaactcg
    15781 gcagtgacgg cctgcagggc caggacctgc tcagctacga gatcttcgtg cgcgacgcac
    15841 gcgcctcgct ggccgccgag cgctacccga gctggatgat gccgatcagc cagtactaca
    15901 acatcggcag catcatggcg atcctcggtg ccggcgccgg cgcgcagccg ttcaacaccg
    15961 tgcaggatta cgacacctgg tcgcgccgct cgctgggcat tcccgagttg ttcgaccagg
    16021 ccatcgacaa catgcgccag ggcatgaagg ccggcgtcgt gcagccacgc gacctgatgg
    16081 aaaaagtgtt gccgcagctg gacgcggtga tcaagccgac cgccgaagag agcatcttct
    16141 ggtcgccgat ccgcaccatg ccggacacca tcgcggccga ggacaaggcg cgcatcagcg
    16201 ccgaatacaa gcgcatgatc gagctgcgca tcatgccggc ctaccgcgcc ctgcgcggct
    16261 tcatcgccac cgagtacctg ccggccacgc gtgccagcag tggcctgggc gcgctgcccg
    16321 atggccaggc ctggtacgcc aacctgatcg tgcagaccac cgccagcaat cagtccgccg
    16381 cgcagctgca tgcgctgggc gaacagcgcg cgcaggagct gcaggcacag atcgccacgg
    16441 tgatgaagga tgccaagctg cgcggcaccc cggccaagct gttgcgcagc atgcgcaatg
    16501 atcgacagtt ccagtacggg gacgccaatg cactgatcaa ccgttaccgc caggtgcagc
    16561 agcaggtcaa cgcacgcctg ccgcaggtgc tggatacgtt gccgaaggca ccgctggaag
    16621 tacgcgcggt ggaaccggag cgggcgctga ctgccgcggc cgcggcctac cagccgtcgc
    16681 caggcgaaca accaggcgtg ctgtacgtga acacccgcga cctggccagc cgcaaacgct
    16741 ggaacgtgcc ggtgcagtac ctgcatgagg cgatccccgg ccatcacgtg cagctgggcc
    16801 tgcagcagga actggccaag ctgccgcgct tccgccgcct cggaggtgat ctcgccttcg
    16861 tcgaaggctg gggcctgtac gccgaaacgc tgggcgaaga cctcggcatc tacaccgatc
    16921 cctacgaccg catcggctac ctgtactcgc gcctgctgcg tgccgcgcgc gtggtggccg
    16981 ataccggcgt gaacgcacag ggctggagca agcagcaggc cgtggcctac ctgcagaaga
    17041 cggtcgacat gagcagcgat gacgccaatg ccgaagtcga gcggatcatg gcccagcccg
    17101 gacaggcgct ctccaacgtg gctggcctga ccaccatcgt ggccctgcgc gacaaggcca
    17161 gggcccgcca gggagccgcc ttcgacctgc gtcgcttcca cgccgaactg ctgaaggacg
    17221 gctcgatgcc gctggacgtg ctggaccgca agatggaacg ctggatggcc gagccggcca
    17281 gtgccacgcc cgccccttca ccctgacccg accggagccc tcatgcgccc tgccgtcgtc
    17341 ctgctcgtcg ccgtgctggg cctgctaccc ctagccagct ccgccgcccc ggtgctgacc
    17401 ccaccggatg cgggtatcga cggcctgatg caggcctatg acggccaggt gcccggcgcc
    17461 gcggtgctgg tcctgcatga cgggcagccg gtattccgtc gcggctacgg gctggcggtg
    17521 gtggaagacg gcaccccggt caccgcggcc agcaacttcc ggctggcctc ggtcagcaag
    17581 cagttcaccg ccgcggcggt gctgctgctg gtggaggacg gccggctcgg gctggaccag
    17641 accgcccgcc agtggctgcc cgaactgcca ccggctgccg ccgccatcac catccgccag
    17701 ctgctgtcgc ataccagcgg cctgctcgac tacgaagacc tgatggaccc ggccgacccg
    17761 cggcaggtgc acgatgccga cgtgctggcc ctgctctcgc gcgaagaccg gctgaacttc
    17821 acgcccggca cgcagtaccg gtacagcaac agcggctacg cgctgctggc actgatcgcc
    17881 ggacgcgcct cgggccagga tttcgcagcc ttcctgcagc agcgcatctt ccgcccgttg
    17941 ggcatggccc ataccgtggc ccaccaggac ggtgtcgaca cgatcgccac gcgtgcctat
    18001 ggctacagct ggctcgatgg ccgctggcag cgcaccgacc agagcaccac cagcgccgta
    18061 ctcggcgatg gcggcatcta ttcctcgctg gacgacctgg cccgctggga tgccgcgctg
    18121 tatgacgacc gcctgttgtc caaggcctcg cgccgcgcga tgttcagccc ggccaccacg
    18181 accaccgaac ctgacgtgcc gcactacggc ttcggctggc gcctgaatgg cgctgtgcaa
    18241 tggcacagcg gcgaaagcat cggcttccgc aacgtgatcg ttcgccaccc ggaaaagcac
    18301 ctgaccgtga tcgtgctgac caaccgcaac gaccccgaac cctatccgct ggcgctgaag
    18361 atcgcccagc gctggctgga caccctgcaa tgacggctgc ttccgacgcc ctgctgggca
    18421 ttcaccacgc cgcgctgatc tgcagcgact acgcgcgatc gaaggacttc tacgtgcgta
    18481 tcctcggcct gcgcgtgctg gccgagaacc atcgtgccgc gcgcgattcc tggaagctgg
    18541 acctggccct gcccgacggc ggccagctgg aactgttctc gttcccctca ccgccgccgc
    18601 ggcccagccg ccccgaggcc cagggcctgc gccacctcgc gttccgggtt gccgcgctgg
    18661 agccgttcat ccagcatctg gcagcgcatg gcgtggcctg cgaaccgatc cgcgtggacg
    18721 aatacaccgg ccgccgcttc accttcttcg ccgaccccga cgacctgccg ctggagctgt
    18781 acgaggtcgg ttgagccgac cgcgtgccga ccaacggtcg gcacccacca tcagcagcag
    18841 gttccaacag atcacaggaa actgtcgaag gcggggtggg tccggttgag ggggtgtgag
    18901 cggc
//
LOCUS       DAOKIP010000062        18856 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.062,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000062 DAOKIP010000000
VERSION     DAOKIP010000062.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 18856)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18856)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18856
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.062"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            297..1070
                     /locus_tag="QEL58_001852"
     CDS             297..1070
                     /locus_tag="QEL58_001852"
                     /EC_number="2.7.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD kinase"
                     /protein_id="HDS1676330.1"
                     /translation="MSDSPRIAFLASTTEPAQMARAAMVSRYGDYAPEQADVLCPLGG
                     DGFMLQTLHRHGHLGKPVFGMKLGTVGFLMNQYRGDDDVHARIARAEPANLRPLEMVA
                     LTESGTSTGSLAYNDVSLLRQTRQAAHIGIDLNGQERVAELIGDGVLVATPAGSTAYN
                     YSAHGPVLPLGSHTIALTPLAPYRPRRWRGAILKADTEVRFRVLDPYKRPVSVTADSH
                     ETRDVVEVTIRESKDRRVTLLFDPEHNLEDRILSEQFVF"
     gene            1117..2061
                     /locus_tag="QEL58_001853"
     CDS             1117..2061
                     /locus_tag="QEL58_001853"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010366538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-nucleotidase"
                     /protein_id="HDS1676331.1"
                     /translation="MGDNSPRLLTVAVTSRALFDLEESHALFESDGVAAYAEFQRQHE
                     DDILGPGVAFPVVRKLLALNQGASPENPRVEVILLSRNSADTGLRIFNSIQHYGLGII
                     RATFTAGEPTWPYVKPFGTDLFLSANPESVRSALRHGIAAATILPKPPGETAAAAADQ
                     IDTGRPAGQLRIAFDGDAVIFGDESERISREQGVEAFGRHERERAREPLSGGPFRGFL
                     SALHTLQEVFPAGESAPIRTALVTARSAPAHERVIRTLREWGVRLDEALFLGGRHKGP
                     FLQAFGADIFFDDSQHNIDSAREHVAAGHVPHGVANEG"
     gene            complement(2239..2790)
                     /locus_tag="QEL58_001854"
     CDS             complement(2239..2790)
                     /locus_tag="QEL58_001854"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017155869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2939 domain-containing protein"
                     /protein_id="HDS1676332.1"
                     /translation="MKKLIAVLVLVVLALSAWWFGGPYVTVHGLSRAIEQRDTARLER
                     YVDFPRVRSSLRAQLNDYLVRQAGPDVAASPFGALLYGLGDQLGGAAVDTMVTPTGIG
                     AMLQGHVLWKRGRNELQGGDAFSPTEPARPLKNAEHHFEAFDRFVVDVDRGPGQPPLK
                     VVLEPQGLRWKVVDLQLGMSGSP"
     gene            complement(2846..3532)
                     /locus_tag="QEL58_001855"
     CDS             complement(2846..3532)
                     /locus_tag="QEL58_001855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005996685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2461 domain-containing protein"
                     /protein_id="HDS1676333.1"
                     /translation="MSTYFSDASFRFLRSLARHNEKAWFNDHRQQYEDHVRQPFLRLL
                     GDLQPALAEVSDHFRADTRGVGGSLFRIHRDARFSNDKSPYKTWQGARLFHERRREVA
                     APSFYVHLQPGESFVGAGLWHPEPETQRRVRHFILDNPGSWKAAAHAPALRKRFDFEE
                     SEKLVRPPRGFPADFEFIDDLKHRNWVMWRSLDDATMTGPRLLSTLGKDLAALGPFVD
                     YLCAALDLEF"
     gene            complement(3529..4968)
                     /gene="sbcB"
                     /locus_tag="QEL58_001856"
     CDS             complement(3529..4968)
                     /gene="sbcB"
                     /locus_tag="QEL58_001856"
                     /EC_number="3.1.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010366550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease I"
                     /protein_id="HDS1676334.1"
                     /translation="MADSFLFYDLETFGQDPRRTRISQYAAIRTDAELNEIETPVSFF
                     VRPADDLLPSPMATLVTGITPQQAMAEGISEAEAFDRINEQLSRPGTCALGYNTLRFD
                     DEFIRYGLFRNFHDPYEREWRNGNSRWDLLDMLRLMRAMRPDGIQWPLREDGATSFKL
                     EHLAEANNVREGDAHEALSDVRATIGMARLFKQSQPRLWEYALKLRDKRFVGGLLDIA
                     ALKPVLHISMRYPASRLCAAPVLPLAVHPTINNRVIVFDLDGDIDDLLELPAEVIAQR
                     LYMRASELPEGVARVPLKEVHLNKVPALIAWNHLRADDHDRLGLDVAAIEAKVERLRP
                     FAAQLAEKARQVYNQPRAATVADVDASLYDGFLGNGDKPLLALARTTAPEQLAELEGR
                     FRDPRLPELLFRYRARNHPGSLAPAERQRWQDYRRQRLLGDGGLGELNLPQYQQQLDA
                     LAADAPDDARRQALLQSLRDWGQHLQETL"
     gene            complement(4968..6335)
                     /locus_tag="QEL58_001857"
     CDS             complement(4968..6335)
                     /locus_tag="QEL58_001857"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010480454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HDS1676335.1"
                     /translation="MIAHASRSLSIIGAGLAGSLLAILLSRQGWRITLYERRGDPRVA
                     DYESGRSINLALAERGRNALRQAGVEDEVMARAVMMRGRMVHPREGEPQLQRYGRDDS
                     EVIWSIHRSDLNTTLLELAEQAGATVHFHRRLHTVDFDAGYARFIDDRDDSPHDIRFD
                     TLIGADGAGSALRAAMNRRAPLGEDIAFLDHSYKELEIPPAADGSFRIERNALHIWPR
                     GHYMCIALPNHEGTFTVTLFLPNQGDPSFATVNTGAQAEALFAREFADTLPLIPNLRA
                     DWEQHPPGLLGTLTLDRWHQGGRAVLIGDAAHAMVPFHGQGMNCAFEDCVALARHLME
                     ADDLQGAFAAFEAERKPNARAIQQMALENYLEMRDRVADPAFLLQRELEQELQRRWPT
                     RFVPHYTMVTFLHTPYAEALRRTELQRDMLVAATAGHDSLDNIDWAALETRIHAQLPV
                     LEGAH"
     gene            complement(6367..7641)
                     /gene="kynU"
                     /locus_tag="QEL58_001858"
     CDS             complement(6367..7641)
                     /gene="kynU"
                     /locus_tag="QEL58_001858"
                     /EC_number="3.7.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012480764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="kynureninase"
                     /protein_id="HDS1676336.1"
                     /translation="MSDLLSRTHAIALDAADPLRPLRNEFLIPRHGGGEQTYFVGNSL
                     GLQPRGAQAAVQEVMKQWGELAVEGHFTGPTQWLSYHRLVSAQLARVVGALPSEVVAM
                     NTLSVNLHLMMVSFYRPTTQRPVILMEAGAFPTDRHAVEAQIRFHGFDPAECLVEVQP
                     DEANGTISLTAIERAITEHGPRLALVLWPGVQYRTGQAFDLDAITRATRLQGARIGFD
                     LAHSVGNLPLRLHDVAPDFAVWCHYKYLNSGPGAVAGAFVHERHHRDSTLPRFAGWWG
                     HEEATRFQMAPQFIPATGAEGWQLSNPPILGLAPLRASLDLFERAGMDALRSKSVALT
                     GMLEALVRARLSSVLDIITPAEPQRRGCQLSLRVIGGRERGRALFEHLRGIGVLGDWR
                     EPDVIRISPTPLYNRYLDVHHFVEEVEAWAGL"
     gene            complement(7770..8294)
                     /locus_tag="QEL58_001859"
     CDS             complement(7770..8294)
                     /locus_tag="QEL58_001859"
                     /EC_number="1.13.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009603031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyanthranilate 3,4-dioxygenase"
                     /protein_id="HDS1676337.1"
                     /translation="MLASPINLHAWIEEHRHLLKPPVGNKMIDNGDFIVMVVGGPNSR
                     TDYHYDEGPEWFYQLEGEMVLKVQEDGAVRDIPIRAGEIFLLPGKVPHSPRRPPGGIG
                     LVVERKRLPHEMDGVIWHCERCNHKLHEEYFPLQNIETDLPKVFARYHASLELRTCSA
                     CGHVDPLPAPAAAG"
     gene            complement(8314..8976)
                     /gene="can"
                     /locus_tag="QEL58_001860"
     CDS             complement(8314..8976)
                     /gene="can"
                     /locus_tag="QEL58_001860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006376530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbonate dehydratase"
                     /protein_id="HDS1676338.1"
                     /translation="MKDIHKLLQNNRDWADRIEKEDPEFFHQLAKQQHPEYLWIGCSD
                     SRVPANQIIGMAPGEVFVHRNVANVVAHTDLNCLSVVQYAVDQLKVKHILIVGHYGCG
                     GVHACLHNTRVGLADNWLRHVGDVMQKHTAIIDAIETDELKHARLCELNVIEQVANLC
                     RSTIVQDAWARGQKLMVHGWVYSLKDGRVREMGIDVGAPEELQPAYEKALSYVPRKGK
                     RD"
     gene            complement(9049..9687)
                     /locus_tag="QEL58_001861"
     CDS             complement(9049..9687)
                     /locus_tag="QEL58_001861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FMN-binding negative transcriptional regulator"
                     /protein_id="HDS1676339.1"
                     /translation="MFTPRAFAETDLLWLDRLLARDPFVTVLTMGSDGLPELTRMPVL
                     YRRDGEHIELRGHWARANPQSRHRGAAKVLIDGPHGYVSASWYPDKEPAARVPTWNYV
                     AAELRGQLHTFDDTDALAELVGAISDRFEASVGQAWQFDAARTEHGPELRAIIGFRFQ
                     VEHVQLKLKLSQNHPDANQQAVVAALDALATPSSQELAQWMRWHREQAARSD"
     gene            complement(9695..10009)
                     /locus_tag="QEL58_001862"
     CDS             complement(9695..10009)
                     /locus_tag="QEL58_001862"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676340.1"
                     /translation="MNDITASRDSWWLASLGNTLIWARLRVRPAGTAEVLDSDGNTLS
                     YDSEDTARSQLFDAEFVEYDGLDEEDALVRGFSLHEVQPPQADSDEGLRGRMIQSLGG
                     RA"
     gene            complement(10017..10316)
                     /locus_tag="QEL58_001863"
     CDS             complement(10017..10316)
                     /locus_tag="QEL58_001863"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005417403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676341.1"
                     /translation="MTLFFALCFVGVAVAGFSAFVIFWPLTLVHVRDRHPALAERFGS
                     GAFLKPDALAWLLRRDYRQQPDRSLSGLATPAWVSLLTLLAGLGMAALLWLASLW"
     gene            complement(10350..11744)
                     /gene="asnS"
                     /locus_tag="QEL58_001864"
     CDS             complement(10350..11744)
                     /gene="asnS"
                     /locus_tag="QEL58_001864"
                     /EC_number="6.1.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019237793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine--tRNA ligase"
                     /protein_id="HDS1676342.1"
                     /translation="MTVVSVEHALAGKIPEGGEVTVRGWVRTVRGSANLAFVNVSDGS
                     CFAPIQVVANDTLANFDEIKRLTSGCSVIATGTLVKSQGKGQSFEIQASALEVVGWVE
                     DPLTYPIQPKPMSPEFLREVAHLRPRTNLFGAVTRIRNCLAQAVHRFFHENGFNWIST
                     PIITTSDAEGAGQMFRVSTLDMVNLPRDEKGAIDFSRDFFGKETFLTVSGQLNVEAYC
                     LALSKVYTFGPTFRAENSHTTRHLAEFWMIEPEIAFADLAEDARLAEEFLKYLFRAVL
                     NERSDDLAFIAERVDKNAITKLEDFINAPFERIDYTDAVSLLQKSGKKFDFPVEWGLD
                     LQTEHERWLTEEHVGRPVVVTNYPEHIKAFYMRLNDDGRTVAAMDVLAPGIGEIIGGS
                     QREERLDVLDARMAQFGLDREHYSWYRDFRRYGSVPHAGFGLGFERLVVYVCGLSNIR
                     DAIPYPRAPGSADF"
     gene            11873..12211
                     /locus_tag="QEL58_001865"
     CDS             11873..12211
                     /locus_tag="QEL58_001865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster assembly accessory protein"
                     /protein_id="HDS1676343.1"
                     /translation="MAVSLTPIAFERVQRFVAQTPGALGLRFGVTKTGCSGWGHVTDL
                     ARDEREGDTVFDQDGVKIYVDAKSLALVDGTVIDFGKHGLSETFTFSNPNATAECGCG
                     ESFTTDADKA"
     gene            12433..12870
                     /gene="rpsF"
                     /locus_tag="QEL58_001866"
     CDS             12433..12870
                     /gene="rpsF"
                     /locus_tag="QEL58_001866"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006376493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S6"
                     /protein_id="HDS1676344.1"
                     /translation="MSRHYEIVFMVHPDQSEQVPAMIERYKSLVENGNGTIHRLEDWG
                     RRQLAYPIQNLVKAHYVLLNIEADQAVLNELTESFRFNDAVLRNLVIKRDEADTEQSL
                     IMKSKDEKGDKPERGERRRRDDEEGESTTTADNEAGDDAASAA"
     gene            12882..13112
                     /gene="rpsR"
                     /locus_tag="QEL58_001867"
     CDS             12882..13112
                     /gene="rpsR"
                     /locus_tag="QEL58_001867"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002804494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S18"
                     /protein_id="HDS1676345.1"
                     /translation="MSKFFRRRKFCKFTAEGVKEIDYKDLNTLRQYLTENGKIVPSRV
                     TGTKSKYQRQLATAVKRARFLALIPYTDNHDV"
     gene            13218..13667
                     /gene="rplI"
                     /locus_tag="QEL58_001868"
     CDS             13218..13667
                     /gene="rplI"
                     /locus_tag="QEL58_001868"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010379584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L9"
                     /protein_id="HDS1676346.1"
                     /translation="MQLILLQKVTNLGNLGDLVDVKPGYGRNFLVPQGKAVPATESNK
                     AEFEAKRAEYEAKAQAIHADADARKAKLEGASVTIAANASTEGKLYGSVGAREIADAF
                     TAAGLPVSKSEVILGEGAFRNIGEYDVLVHLHADVETTVKVVVVAEA"
     gene            13927..17430
                     /gene="smc"
                     /locus_tag="QEL58_001869"
     CDS             13927..17430
                     /gene="smc"
                     /locus_tag="QEL58_001869"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006451583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome segregation protein SMC"
                     /protein_id="HDS1676347.1"
                     /translation="MRLSTIKLSGFKSFVDPTTLHLPTNMTGVVGPNGCGKSNIIDAV
                     RWVMGESSASRLRGDSLTDVIFSGSNARKPVSQATVELIFDNSDHTISGEYASFNEIS
                     VKRTVSRDGTSNYYLNGTKCRRRDITDLFLGTGLGPRSYSIIEQGMISQIIEARPEDL
                     RVYLEEAAGISKYKERRKETETRIRHTRENLDRLGDLRDEISKQLEHLKRQARQAEQY
                     QALQEERRVKDAEWKALEFRGLDGRLSKLREGLSQEESKLQQLIADQRDAEARIETSR
                     VRREEAADALNTAQAAVYQVGSTLARLEQQIQHQRELSQRLHKARDETRQALAELGQH
                     ISGDEAKLMVLREAVEAATPQLEELQEENEIKQESLREAEERLASWQQRWEQHTSQSS
                     EASRAGDVERTRVDYLDKQVLDADRRREALAAERAGLDVDALEEAFEQLHLQHDTQKT
                     ALDELGEEVEHRKQGVAAVQEQQRNGQNELAELRKQANGLRGRLASLETLQQAALGQE
                     QGAAVAWLKAHGLDSAARVGERLDVDAGWENAVESALGQLIEGVLVDDPAGLVDALGE
                     LGEGHIALVADDDADLKVAPTSLAARVRGPAAIRRLLAHLHGARDLAEAKTLQASLPE
                     GDSVITQGGERLGQGWLRVSRSGAAQQGALLREREINELREQIEQLQEREAELEEQLA
                     GFREQLQAAEQQREDAQRTLYQAHRAVSELAGQLQGQQGKVEAARTRIDRIEGELKQL
                     QETLEANNEQAREARSRLENAVSSMGDLESTRQRLEGERRQLTEARDLARDAARAVRE
                     RSHSLALTLESQRAQLASLSQALERMGTQRGQLDSRLGELHSQLDEGDSPVESLQAEH
                     QNALEERVRADRVLTEARTLLDGIDAELRNYEQTRHQRDEQALAQRERISQRKLDQQA
                     LVLSADTLQGAVEKAGFVLQDVLNALPEDARLGDWEQAVHQIDGRMRRLEPVNLAAIH
                     EYGEASQRSEYLDAQHVDLTTALETLEDAIRKIDRETRGRFKDTFDRVNAGVQALYPR
                     LFGGGHAYLELTGEDLLDTGVTIMARPPGKRVSSISLLSGGEKAMTAVALVFAIFQLN
                     PAPFCLLDEVDAPLDEANVGRLANMVKEMSEKVQFLFVSHNKATMEAAHQLSGVTMRE
                     PGVSRLVSVDLEEAARLAGAA"
     gene            17477..18214
                     /gene="zipA"
                     /locus_tag="QEL58_001870"
     CDS             17477..18214
                     /gene="zipA"
                     /locus_tag="QEL58_001870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016903841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZipA"
                     /protein_id="HDS1676348.1"
                     /translation="MSDTALLRIGILAAGLLLIAAIFLFGRPKKKPQGRRVESAEPSS
                     GERREPVMGEDGVAVVDGRVEPGMGGEGEQAELGLADTDAGASDLGKRATQDFDKIVS
                     LFVAARAGEQLRGEDIVVAAEKTGLVFGHMNVFHRLVEAHPERGPIFSMASIMKPGSF
                     DMANIRAMETPAIAFFLTLPAPLTALDAWEKMLPTVQRMAELLDGVVLDDSRNALGRQ
                     RIAHIRDELRAYDRQHQAPPLTKTPRW"
     gene            18400..18846
                     /locus_tag="QEL58_001871"
     CDS             18400..18846
                     /locus_tag="QEL58_001871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HDS1676349.1"
                     /translation="MPSPRLLKGRWPQSRNVYAITTITHRRQRFFDDADLAALAVATL
                     QRLQQEGRYINLAWVVMPDHIHWLMQLRGGTLAASVQIMKSRCSRLSGTDGPLWQRGY
                     YDHAVRCDESLRSQALYIAANPVRAGLAEQLGEYPFAWCRWFDRAP"
BASE COUNT         3213 a         6165 c         6427 g         3051 t
ORIGIN      
        1 gcccccctga ctcagggggg ctcctgatct gcagcagttg gaggaacggc cccgcgaaag
       61 cggggccgtt ctgtttctgc ctgtctttct gcgatcactg acccgacgcc ggccggcaac
      121 ctgtcaggtg gatgaccggc ccgtccgccg ggaccgtgag cgccatggat ggcgcgaccg
      181 agcccccatg gatgggttta tggcgtgtcc cggcggacgg gccggtcatc cgcccagcgg
      241 ggtccaaccc ccggcgctcg gttatgctct ccctcatgcc tcccccggat ccaccgatga
      301 gcgactcccc ccgcatcgct ttcctggcca gcaccaccga accggcgcag atggcccgcg
      361 cggcgatggt ctcgcgctat ggcgactacg cgcccgagca ggccgacgtg ctgtgcccgc
      421 tgggcggtga tggcttcatg ctgcagaccc tgcaccggca cgggcacctg ggcaagccgg
      481 tgttcggcat gaagctgggc acggtcggct tcctgatgaa ccagtaccgc ggcgacgatg
      541 acgtgcatgc gcgcattgcc cgcgccgagc cggccaacct gcgcccgctg gaaatggtgg
      601 cgctgaccga gtcgggtacc agcaccggtt cgctggccta caacgacgtg tcgctgctgc
      661 gccagacccg gcaggctgcg catatcggca tcgatctgaa cggccaggaa cgcgtggccg
      721 agctgatcgg cgacggcgtg ctggtggcca ccccggccgg cagcaccgcc tacaactatt
      781 ccgcgcacgg cccggtgctg ccgctgggct cgcacaccat cgcgctgacg ccgctggctc
      841 cgtaccgacc gcgacgctgg cgcggggcga tcctcaaggc cgataccgaa gtgcgcttcc
      901 gtgtgctcga tccctacaag cgcccggtca gcgtgaccgc cgattcgcac gagacccgcg
      961 acgtggtcga agtgaccatc cgtgagtcga aggaccgccg cgtgaccctg ctgttcgacc
     1021 cggagcacaa cctggaagac cggatcctga gcgaacagtt cgttttttga ggacaatggg
     1081 cggccggccg tgccgaccgc ttgaaggacc ccaccgatgg gcgacaactc cccccgtttg
     1141 ctaaccgtcg cggtgacctc gcgcgccctg ttcgacctcg aggaaagcca tgcgctgttc
     1201 gaaagcgatg gcgtggcggc ctacgccgaa ttccagcgcc agcatgagga cgacatcctc
     1261 gggcccggcg tagccttccc ggtggtgcgc aagctgctgg cgctgaacca gggcgccagc
     1321 ccggaaaatc cgcgcgtcga ggtgatcctg ctgtcgcgca attcggccga taccggcctg
     1381 cgcatcttca attcgatcca gcattacggt ctgggcatca tccgcgcgac gttcaccgcc
     1441 ggcgagccga cctggcccta cgtgaagccg ttcggcaccg acctgttcct gtcggccaac
     1501 ccggaatcgg tgcgcagcgc attgcgccat ggcatcgcgg cggcgaccat cctgcccaag
     1561 ccgcccggcg agactgccgc tgcggcggcc gaccagatcg acaccggtcg accggccggg
     1621 cagctgcgca tcgccttcga cggcgacgcg gtgatcttcg gcgacgagag tgagcgcatc
     1681 tcgcgcgaac agggcgtgga ggcgtttggc cggcatgaac gcgaacgcgc ccgcgaaccg
     1741 ctcagcggcg gtccgttccg cggtttcctg tcggccctgc atacattgca ggaagtgttc
     1801 ccggccggcg agagtgcgcc gatccgcacc gcgctggtca ctgcgcgctc ggcaccggcc
     1861 cacgagcggg tgatccgcac cctgcgtgag tggggcgtgc gcctggacga ggcgctgttc
     1921 ctgggtggcc gccacaaggg cccgttcctg caggcgttcg gcgccgatat cttcttcgac
     1981 gattcacagc acaacatcga cagtgcgcgc gagcatgtgg ctgccggcca tgtgccgcac
     2041 ggtgtggcca acgaggggta gggtcaggta gttgccaacc agggttggca accaccgggg
     2101 cactgcgctt tggtagatgc ccaccttggt gggcatggat ccaggacggc gccaaccaag
     2161 gttggcacct accaggccca atgcgcccac caaggtgggc acgtacccaa agcagcgcca
     2221 tcgaaggggc atgacccgtc acgggctgcc tgacatcccc agctgcaggt ccaccacctt
     2281 ccagcgcagg ccctgcggct ccagcaccac cttcagtggc ggttggccag ggccgcggtc
     2341 gacgtcgacc acgaagcggt cgaatgcttc gaagtgatgc tcggcattct tcagcggccg
     2401 tgccggctcg gtcggactga aggcatcgcc gccctgcagt tcattgcggc cgcgcttcca
     2461 cagcacgtgg ccctgcagca tcgcgccgat cccggtcggg gtcaccatgg tgtccaccgc
     2521 ggcgccgccg agctggtcac ccaagccgta gagcagggcg ccgaacgggc tggccgccac
     2581 atccgggccg gcctggcgca ccaggtagtc gttgagctgc gcgcgcaggc tgctgcgcac
     2641 gcgtgggaaa tcgacgtagc gctccagccg cgcggtgtcg cgctgctcga tggccctgga
     2701 caggccatgc acggtcacgt acgggccgcc gaaccaccac gcggacagcg cgagaaccac
     2761 caggaccagc actgcgatga gcttcttcat gccgcccaga ctgccgcaag tgaggcggcc
     2821 agtggtgaat ggcgggtgat gtggctcaga actccaggtc cagcgcggcg cacaggtagt
     2881 cgacgaacgg gccgagtgcc gccagatcct tgcccagcgt ggacagcagg cgcgggccgg
     2941 tcatggtggc gtcgtccagc gagcgccaca tcacccagtt gcggtgcttg aggtcgtcga
     3001 tgaactcgaa atcagccggg aaaccgcgcg gcggccgcac cagcttctcg ctttcctcga
     3061 agtcgaagcg cttgcgcagc gcgggcgcat gcgcggcggc cttccagctg cccgggttgt
     3121 cgaggatgaa gtggcgcacg cgacgctggg tttcaggctc cggatgccac aggccggcgc
     3181 cgacgaagct ttcgcccggc tgcaggtgca cgtagaacga gggcgcggcc acttcgcggc
     3241 ggcgctcatg gaacagccgc gcaccctgcc aggtcttgta gggcgacttg tcgttggaaa
     3301 aacgcgcgtc gcgatggatg cggaacagcg agccaccgac gccgcgggta tcggcgcgga
     3361 aatggtcgct gacctcggcc aacgccggct gcaggtcgcc gagcaggcgc aggaacggtt
     3421 gccgcacatg gtcttcgtac tgctggcggt ggtcgttgaa ccatgccttt tcgttatgcc
     3481 gcgccaggct gcgcaggaac ctgaagctgg cgtccgagaa ataggtactc acaacgtctc
     3541 ctgcagatgc tggccccagt cgcgcagcga ttgcagcagg gcctggcgcc gcgcatcgtc
     3601 gggtgcatcg gcggccagtg catcaagctg ctgctggtac tggggcaggt tgagttcacc
     3661 caggccgccg tctccgagca ggcgctggcg gcggtaatcc tgccagcgct ggcgttcagc
     3721 cggtgcgagg ctgccgggat ggttgcgcgc acggtagcgg aacagcagct cgggcaggcg
     3781 cgggtcgcgg aagcggcctt ccagctcggc cagctgttcc ggtgcggtgg tgcgcgccag
     3841 ggcaagcaat ggcttgtcgc cgttgccgag gaagccgtcg tacagcgagg cgtcgacgtc
     3901 ggccacggtg gcggcgcggg gctggttgta gacctggcgt gccttttcgg ccagctgcgc
     3961 ggcgaaagga cgcagccgtt cgaccttggc ctcgatggcc gccacgtcca ggcccaggcg
     4021 atcatggtcg tcggcgcgca ggtggttcca ggcgatcagc gccggcacct tgttcaggtg
     4081 cacctccttc agcggcaccc gcgccacgcc ttcgggcagc tcgctggcac gcatgtacag
     4141 gcgctgcgcg atcacctcgg ccggcagttc cagcaggtcg tcgatgtcgc cgtcgaggtc
     4201 gaatacgatc acccggttgt tgatggtcgg gtgcaccgcc agcggcagca ccggcgccgc
     4261 gcacaggcgg ctggccgggt agcgcatgga gatgtgcagt accggcttca acgcggcgat
     4321 gtccagcagg ccaccgacga aacgcttgtc gcgcagcttc agcgcgtact cccacaggcg
     4381 cggctgcgac tgcttgaaca ggcgcgccat gccgatggtg gcgcgcacgt cggacagtgc
     4441 ttcgtgtgca tcgccttcgc gcacgttgtt ggcttcggcc agatgttcga gcttgaacga
     4501 ggtggcgccg tcttcgcgca gcggccactg gatgccgtcc gggcgcatgg cgcgcatcag
     4561 ccgcagcatg tccagcaggt cccagcgcga attgccgttg cgccactcgc gttcgtacgg
     4621 gtcatggaaa ttgcggaaca ggccgtagcg gatgaactcg tcgtcgaagc gcagcgtgtt
     4681 gtagcccagt gcgcaggtgc cggggcgtga cagctgttcg ttgatgcggt cgaaagcctc
     4741 ggcctcgctg atgccttcgg ccatggcctg ctgcggcgtg atgccggtga ccagggtcgc
     4801 catcggtgag ggcagcaggt catcggccgg gcgcacgaag aagctgaccg gcgtttcaat
     4861 ctcgttgagc tcagcgtcgg tgcggatcgc cgcgtactgc gagatgcgcg tgcggcgcgg
     4921 atcctggccg aaggtttcca ggtcgtagaa caggaagctg tcggccatca gtgcgcgccc
     4981 tccaggaccg gcaactgcgc gtgtatccgt gtttccagcg cggcccagtc gatgttgtcc
     5041 aatgaatcgt ggccggcggt ggcggccacc agcatgtcgc gctgcagctc ggtacggcgc
     5101 agcgcttcgg cgtagggcgt gtgcaggaag gtgaccatcg tgtaatgcgg cacgaagcgg
     5161 gtcggccagc gtcgctgcag ttcctgttcc agctcacgct gcagcaggaa cgcaggatcg
     5221 gccacgcggt cacgcatttc caggtagttt tccagcgcca tctgctggat ggcgcgcgcg
     5281 ttcggcttgc gctcggcctc gaacgcggcg aacgcgcctt gcagatcatc cgcttccatc
     5341 aggtggcggg ccagcgccac gcagtcctcg aacgcgcagt tcatgccctg gccgtggaat
     5401 ggcaccatcg catgcgcggc gtcgccgatc agcacggcgc ggccgccctg gtgccaacgg
     5461 tccagggtga gcgtaccgag caggccgggt ggatgctgtt cccagtccgc gcgcaggttc
     5521 gggatcaacg gcagggtgtc ggcgaactcg cgcgcgaaca gcgcctctgc ctgcgcgccg
     5581 gtgttgacgg tggcaaagct gggatcgccc tggttcggca ggaacagggt gacggtgaag
     5641 gtgccttcgt ggttgggcag ggcgatgcac atgtagtggc cacgtggcca gatgtgcagt
     5701 gcattgcgct cgatgcggaa gctgccgtcg gcggccggcg ggatctccag ctccttgtag
     5761 gaatggtcga ggaaggcgat gtcctcgccc agcggcgcgc gccggttcat cgctgcgcgc
     5821 agggccgatc cggcgccgtc ggcaccgatc agggtgtcga agcggatgtc gtgcgggctg
     5881 tcgtcgcggt catcgatgaa acgcgcgtag cctgcgtcga aatcgacggt gtgcaggcgg
     5941 cgatggaagt gcacggtcgc gccagcctgt tcggccagtt ccagcagcgt ggtgttcagg
     6001 tcgctgcgat ggatcgacca gatcacctcg ctgtcgtcgc ggccgtagcg ctgcagctgc
     6061 ggttcgccct cgcgcggatg caccatgcgc ccgcgcatca tcaccgcgcg cgccatcacc
     6121 tcgtcttcca cgcccgcctg gcgcagcgcg ttgcgcccgc gctcggccaa cgccaggttg
     6181 atcgaacggc cgctttcata gtcggccacg cgcggatcgc cgcggcgctc gtacagggtg
     6241 atgcgccagc cctggcgtga cagcaggatg gccagcagag aaccggcgag gccggcaccg
     6301 atgatgctca acgagcggga ggcatgtgcg atcaacgaac tgtccagcag tagggaaggg
     6361 gcgggctcag aggccagccc aggcttccac ttcctcgacg aaatggtgca cgtccaggta
     6421 gcggttgtag agcggggtgg gcgaaatccg gatcacgtcc ggttcgcgcc agtcgccgag
     6481 cacgccgatg ccgcgcaggt gctcgaacag ggcgcggccg cgctcgcggc caccgatcac
     6541 gcgcagcgac aactggcagc cacggcgttg cggttcggcc ggggtgatga tgtccagaac
     6601 gctcgacagg cgcgcgcgca ccagcgcttc gagcatgccg gtcagcgcca ccgatttgct
     6661 gcgcagggcg tccatgccgg cgcgctcaaa caggtccagc gacgcacgca gcggtgccag
     6721 gccgaggatc ggcggattgc tcagctgcca gccctcggca cccgtggccg ggatgaactg
     6781 cggcgccatc tggaagcggg tggcttcctc atggccccac cagccagcga agcgtggcag
     6841 tgtgctgtcg cgatggtgcc gctcatgcac gaacgcgccg gccactgcgc ccggtccact
     6901 gttgaggtac ttgtagtggc accacacggc gaaatcgggt gcgacgtcat gcaggcgcag
     6961 cggcaggttg ccgaccgagt gcgcaagatc gaagccgatc cgcgcaccct gcaggcgcgt
     7021 ggcgcgggtg atcgcatcga ggtcgaaggc ctggccggtg cggtactgca cgccgggcca
     7081 cagcaccagc gccaggcgtg ggccatgctc ggtgatggca cgctcgatcg ccgtgagcga
     7141 gatcgtgcca ttggcttcat ccggctgcac ttccaccagg cactcggcgg ggtcgaagcc
     7201 atggaagcgg atctgcgctt ccacggcgtg gcgatcggtg gggaacgcgc cggcttccat
     7261 caggatcacc gggcgctgcg tggtcggccg gtagaagctg accatcatca ggtgcaggtt
     7321 cacgctcagg gtgttcatcg ccaccacttc gctgggcagc gcaccgacca cgcgggccag
     7381 ttgtgcgctc accaggcggt ggtaggacag ccactgcgtc gggccggtga agtggccttc
     7441 cacggccagc tcgccccact gcttcatcac ttcctgcacg gctgcctgcg cgccgcgcgg
     7501 ctgcaggccc agcgagttgc cgacaaagta ggtctgctcg ccgccaccat ggcgcggaat
     7561 caggaattcg ttgcgcagcg gacgcagcgg atcggcggcg tccagggcaa tggcgtgggt
     7621 gcggctgagc aggtcggaca tggtcgggca acaggctgca acgggacggc cagtgtaccg
     7681 cctggggcgg cgtagccggt ggcagggaga cgtgcatgtc gcccaacctg tagagccggg
     7741 cctacgctcg gctctacaac ggcggatggt caaccagcgg ccgccggtgc cggcagcggg
     7801 tccacatgcc cgcaggcgct gcaggtgcgc agctccaggc tggcgtggta gcgcgcgaag
     7861 accttgggca ggtcggtttc gatgttctgc agcgggaaat actcttcgtg cagcttgtgg
     7921 ttgcagcgct cgcagtgcca gatcacgccg tccatctcat gcggcaggcg cttgcgctcg
     7981 accaccaggc cgatcccgcc gggcggccgc cgcggcgaat gcggtacttt ccccggcaac
     8041 aggaagatct cgccggcgcg gatcgggatg tcacgcaccg cgccatcctc ctgcaccttc
     8101 agcaccatct cgccttcaag ctggtagaac cactccgggc cttcgtcgta gtggtaatcg
     8161 gtgcgcgagt tcggcccgcc gaccaccatc acgatgaaat cgccgttgtc gatcatcttg
     8221 ttgcccaccg gcggcttcag caggtggcgg tgttcttcaa tccaggcgtg caggttgatc
     8281 ggcgaagcga gcatgatcgg tttcccttgg aggtcagtcg cgcttgccct tgcgcggcac
     8341 gtaggacagc gccttttcgt aggcgggctg cagctcttcc ggcgcgccga cgtcgatgcc
     8401 catttcgcgc acacggccgt ccttcaggct gtagacccag ccgtgcacca tcagcttctg
     8461 gccacgggcc caggcatcct gcacgatggt cgagcggcac aggttggcga cctgctcgat
     8521 cacgttcagc tcgcacaggc gggcatgctt gagttcgtcg gtctcgatgg cgtcgatgat
     8581 cgcggtgtgc ttctgcatca cgtcaccgac gtggcgcagc cagttgtcgg ccaggccgac
     8641 gcgggtgttg tgcaggcagg cgtgcacgcc accgcagccg taatggccga caatcaggat
     8701 gtgcttcacc ttcagctggt ccaccgcgta ctgcaccacg ctcaggcagt tcaggtcggt
     8761 gtgcgcgacc acgttggcca cgttgcggtg cacgaacacc tcacccgggg ccatgccgat
     8821 gatctggttg gccggcacgc gcgaatcgga acagccgatc cacaggtatt ccgggtgctg
     8881 ctgcttggcc agctggtgga agaactcggg gtcttccttc tcgatgcggt cggcccagtc
     8941 gcggttgttc tgcagcagct tgtggatgtc tttcatgttc gggtccctgg cgtcgggtag
     9001 gggctcgccg caaccctccg gctgcgtcgt tgcgggaatc tgttgcgctc agtcgctgcg
     9061 ggcggcctgt tcgcggtgcc agcgcatcca ctgcgccagt tcctgggaag atggggtggc
     9121 cagcgcgtcc agcgcggcga ccactgcctg ctggttggcg tcgggatgat tctggctcag
     9181 cttgagcttc agctgcacgt gctcgacctg gaaacggaaa ccgatgatgg cgcgcagttc
     9241 cgggccatgc tcggtgcgcg ctgcatcgaa ctgccaggcc tggccgacgc tggcttcgaa
     9301 gcggtcgctg atggcgccga ccagctcggc cagtgcatcg gtatcgtcga aggtatgcag
     9361 ctggccgcgc agttccgccg caacgtagtt ccaggttgga acccgcgcgg cgggctcctt
     9421 gtccgggtac cagctggccg agacataacc gtgcgggcca tcgatcagca ccttggccgc
     9481 gccacgatgg cgtgactgcg gattggcacg ggcccagtgc ccgcgcagct cgatatgctc
     9541 gccatcacgc cgatacaaca ccggcatccg ggtcagttcc ggcaggccat cgctgcccat
     9601 ggtgagcacg gtgacgaacg gatcgcgcgc cagcaggcgg tccagccaga gcaggtcggt
     9661 ctcggcgaag gcgcgcgggg tgaacatgcg cgggtcaggc gcgcccgccc agcgactgga
     9721 tcatgcgtcc ccgcaggcct tcatcgctgt cggcctgcgg cggctgcact tcatgcaggc
     9781 tgaagccacg caccagtgcg tcttcctcgt ccaggccgtc gtactcgacg aactcggcat
     9841 cgaacagctg cgaacgggcg gtgtcttcgc tgtcatagct cagcgtgttg ccatcgctgt
     9901 cgagcacttc ggcggtgccg gccgggcgca cgcgcaggcg tgcccagatc agggtgttgc
     9961 cgaggctggc cagccaccag ctgtcgcgcg aggcggtgat gtcattcatg gatgtgttac
    10021 cagagcgagg ccagccagag cagggcggcc atgcccagtc cggccagcag ggtcagcagc
    10081 gatacccagg ccggggtcgc cagcccggac aacgagcggt ccggttgctg gcgatagtcg
    10141 cggcgcagca gccaggccag ggcatcgggc ttgaggaagg cgccactgcc gaagcgctcg
    10201 gcgagcgccg gatggcgatc gcgcacgtgc accagggtca gtggccagaa gatcacgaag
    10261 gcactgaacc cggccactgc aacgccgacg aaacagaggg cgaagaacag ggtcatgggg
    10321 gcagtacctc cgtggtcgtg tgaagtggct tagaagtccg cgctgcccgg ggcgcgcggg
    10381 taggggatcg catcgcggat gttggacagg ccgcagacgt acaccaccag gcgctcgaag
    10441 ccgaggccga agccggcgtg cggcaccgag ccatagcgac ggaaatcgcg gtaccagctg
    10501 tagtgctcgc ggtccaggcc gaactgggcc atgcgcgcgt ccagcacgtc caggcgctct
    10561 tcgcgctggc tgccaccgat gatctcgccg atgccggggg ccagcacgtc catcgcggcg
    10621 acggtcctgc cgtcatcgtt caggcgcatg tagaaggcct tgatgtgctc cggatagttg
    10681 gtcaccacca ccgggcggcc gacgtgttcc tcggtcagcc agcgctcgtg ctcggtctgc
    10741 aggtccaggc cccattcgac cgggaagtcg aacttcttgc cggacttctg cagcaggctg
    10801 accgcatcgg tgtagtcgat gcgttcgaac ggtgcgttga tgaagtcttc cagcttggtg
    10861 atcgcgttct tgtccacgcg ctcggcgatg aaggccaggt cgtcgctgcg ctcgttcagc
    10921 acggcgcgga acaggtactt caggaactct tcggccaggc gtgcatcttc ggccaggtcg
    10981 gcgaaggcga tttccggctc gatcatccag aactccgcca ggtggcgggt ggtgtggctg
    11041 ttctcggcgc ggaaggtcgg gccgaaggtg tagaccttgc tcagcgccag gcagtaagcc
    11101 tcgacgttca gctggccgga cacggtcagg aaggtttcct tgccgaagaa gtcgcggctg
    11161 aaatcgatcg cgcccttctc gtcacgcggc aggttcacca tgtccagggt ggacacgcgg
    11221 aacatctggc cggcgccttc ggcgtcggag gtggtgatga tcggcgtgct gatccagttg
    11281 aagccgttct cgtggaagaa acggtgcacg gcctgggcca ggcagttgcg gatgcgggtg
    11341 actgcgccga acaggttggt gcgcgggcgc aggtgcgcca cttcgcgcag gaactccggc
    11401 gacatcggct tgggctggat cgggtaggtg agcgggtctt cgacccagcc gaccacctcc
    11461 agcgcgctgg cctggatctc gaacgactgg cccttgccct gcgacttcac cagggtgccg
    11521 gtggcgatga ccgagcagcc gctggtcagg cgcttgatct cgtcgaagtt ggccagggtg
    11581 tcgttggcca cgacctggat cggggcgaag caggagccgt cgcttacatt cacgaaggcc
    11641 agattcgctg aaccgcgcac cgtgcgcacc catccgcgta ccgtgacttc gccgccttcc
    11701 gggatcttcc cggcaagcgc atgttcaacg ctgaccaccg tcatgacttg aatcctctgc
    11761 tgatcgactc gatctgtgaa cacgggagtt taccggttgc agtgttccgc ttgcgaggca
    11821 tttttcgcgg caacggctcc ttataatgtc cccgtacctc tggagtagcc ccatggccgt
    11881 cagcctgacc cccattgcct tcgagcgcgt gcagcgcttc gtcgcccaga cccccggcgc
    11941 gctgggcctg cgtttcggcg tgaccaagac cggctgttcc ggctggggcc acgtcaccga
    12001 cctggcccgc gacgagcgcg agggcgatac cgtgttcgac caggacggcg tgaagatcta
    12061 cgtcgatgcc aagagcctgg cgctggtgga cggcacggtg atcgacttcg gtaagcacgg
    12121 cctgagcgag accttcacgt tcagcaaccc gaacgccacc gccgagtgtg gctgcggcga
    12181 gagcttcacc accgacgccg acaaggcctg agggccggcc ggagcctgat cgctctggta
    12241 acggccaacc tgggttggca tgggggctgc tcccgggttc aggttgccct atggcccacc
    12301 ggttgcccgg cacccccatc tgcgccataa tgcgcggctt cctgccttcc tggcgggaat
    12361 ccttgcccca ccgcggtctc aacggcgggg ggctgtccgg ccgcaaggcc acatccgaaa
    12421 ggtagaaaaa acatgagtcg tcattacgaa atcgtgttca tggtccaccc ggaccagagc
    12481 gagcaggtcc cggccatgat cgagcgctac aagtcgctgg tcgagaacgg caacggcacc
    12541 atccaccgcc tggaagactg gggccgccgc cagctggcgt acccgatcca gaacctggtg
    12601 aaggcgcact acgtgctgct gaacatcgaa gccgaccagg ccgtgttgaa cgagctgacc
    12661 gaaagcttcc gcttcaacga cgccgtgctg cgcaacctgg tcatcaagcg tgacgaggct
    12721 gacaccgagc agtcgctgat catgaagagc aaggacgaga agggtgacaa gccggagcgc
    12781 ggtgagcgcc gtcgtcgtga cgacgaagaa ggcgagtcca ccaccaccgc tgacaacgaa
    12841 gccggcgacg acgccgcttc cgccgcctaa ggagccttcc catgtccaag ttcttccgtc
    12901 gccgcaagtt ctgcaagttc acggctgaag gtgtgaagga gatcgactac aaggatctca
    12961 acaccctgcg ccagtacctg accgagaacg gcaagatcgt gccgagccgc gtcaccggta
    13021 ccaagtcgaa gtaccagcgc cagctggcga ccgccgtcaa gcgcgctcgc ttcctggccc
    13081 tgatcccgta caccgacaac cacgacgtct gatgcccggc ggggcggccc ggtgccgccc
    13141 ccgctgtgcc agctattcgg acagcctttg ttgcggggcg tcgcctcgct aacgaataac
    13201 tcatctggag caataccatg cagctgatcc tcctgcagaa agtcaccaac ctcggcaacc
    13261 tgggcgacct ggtcgacgtg aagccgggct acggccgtaa cttcctcgtg ccgcagggca
    13321 aggccgttcc ggccaccgag agcaacaagg ccgagttcga agccaagcgc gccgagtacg
    13381 aagccaaggc ccaggccatc cacgccgacg ctgacgcccg caaggccaag ctggaaggcg
    13441 cgagcgtgac catcgccgcc aacgcttcga ccgaaggcaa gctgtacggc tcggtcggcg
    13501 cccgtgaaat cgccgatgcc ttcaccgctg ccggcctgcc ggtcagcaag agcgaagtca
    13561 tcctgggcga aggcgccttc cgcaacatcg gcgaatacga cgtgctggtc cacctgcacg
    13621 ccgacgtcga gaccaccgtc aaggtcgtcg tcgtcgccga agcctgatcc cacgccgcaa
    13681 ggcctggaat caccgcagaa cgggcacccg caagggtgcc cgttttgttt tgtggcccgc
    13741 tttcgtggtg ttgagccctg tcccgccggc gaggcggggc cgggcaatgt tccacgccca
    13801 ttcgtagaac acggccacat cggtatactc agggcgtcac acccgttcca cgggcatcga
    13861 tcccaacagg atcaatgact tggagggtaa acgcaggccg cttgccggcc ccagtccgga
    13921 acccctatgc gtctttccac gatcaagctg tccggcttca agtcgttcgt cgatccgacc
    13981 accctgcacc tgccgaccaa catgaccggc gtggtggggc ccaatggctg cggcaagtcg
    14041 aacatcatcg acgccgtgcg ctgggtcatg ggcgaaagtt cggccagccg cctgcgcggc
    14101 gactcgctga ccgacgtgat cttctccggc tccaacgccc gcaagccggt ctcgcaggcc
    14161 accgtcgagc tgatcttcga caactccgac catacgattt ccggcgaata cgcctcgttc
    14221 aacgaaatct cggtcaagcg cacggtcagc cgcgacggca ccagcaacta ctatctcaac
    14281 ggcaccaagt gccgtcgccg cgacattacc gacctgttcc tcggtaccgg cctgggcccg
    14341 cgcagctact cgatcatcga gcagggcatg atcagccaga tcatcgaggc gcgcccggaa
    14401 gacctgcgcg tgtacctgga agaggcggcc ggtatctcca agtacaagga gcgccgcaag
    14461 gagaccgaga cccgcatccg ccacacccgc gagaacctgg accggctggg cgacctgcgc
    14521 gacgagatca gcaagcagct ggagcacctc aagcgccagg cccggcaggc cgagcagtac
    14581 caggccctgc aggaagagcg ccgggtcaag gacgccgagt ggaaggccct ggaattccgt
    14641 gggctcgacg gccgtctgtc caagctgcgc gaagggctgt cacaggaaga gagcaagctg
    14701 cagcagctga tcgccgacca gcgcgatgcc gaggcccgca tcgagacctc gcgcgtgcgt
    14761 cgcgaagagg ccgccgatgc gctcaatacc gcgcaggccg cggtctacca ggtcggcagc
    14821 acgctggcgc gcctggagca gcagatccag caccagcgcg agctgtcgca gcgcctgcac
    14881 aaggcccgcg acgagacccg ccaggcgctg gccgaactgg gccagcacat cagcggcgac
    14941 gaggccaagc tgatggtgct gcgcgaggcg gtggaggctg ccaccccgca gctggaggag
    15001 ctgcaggaag agaacgagat caagcaggaa agcctgcgcg aggccgagga gcggctggcc
    15061 agctggcagc agcgctggga acagcatacc tcgcagagtt cggaagcctc gcgtgccggc
    15121 gatgtcgagc gcacccgcgt ggactacctg gacaagcagg tcctcgacgc cgaccgacgc
    15181 cgcgaagcac tggccgccga gcgcgccggg ctggacgtgg acgcgttgga agaagccttc
    15241 gagcagctgc atctgcagca cgacacgcag aagaccgcgc tggacgaact gggcgaagag
    15301 gtggaacacc gcaagcaggg cgtggcagcc gtgcaggagc agcagcgcaa cggccagaac
    15361 gaactggccg aactgcgcaa gcaggccaat ggactgcgcg gccgcctggc atcgctggaa
    15421 accctgcagc aggccgcgct cggccaggag cagggcgctg ccgtggcctg gctgaaggcg
    15481 catggactgg attcggcggc gcgtgtcggc gaacgcctgg atgtcgatgc tggttgggaa
    15541 aatgcggtcg aaagtgcgct cggccagttg atcgaaggcg tgctggtcga tgacccggcc
    15601 gggctggtcg atgcgctggg tgagctgggc gaaggtcaca tcgcgctggt tgccgacgat
    15661 gatgcggacc tgaaggttgc cccgacctcg ctggcggcac gcgtgcgtgg cccggccgcg
    15721 atccgtcgcc tgctggcgca cctgcacggt gcacgtgatc tggccgaggc gaagacgctg
    15781 caggccagcc tgcccgaagg cgattcggtc atcacccagg gcggcgagcg cctgggccag
    15841 ggctggctgc gcgtttcgcg ctcgggtgcg gcccagcagg gcgcattgct gcgcgaacgt
    15901 gagatcaatg aactgcgcga gcagatcgaa cagttgcagg agcgcgaggc tgagctggaa
    15961 gagcagctgg ctggcttccg cgaacagttg caggccgccg agcagcagcg cgaagacgcg
    16021 cagcgcacgt tgtaccaggc ccatcgtgcg gtgtccgagc ttgccggcca gctgcagggc
    16081 cagcagggca aggtggaagc cgctcgtacc cgcatcgacc gcatcgaagg tgaactgaag
    16141 cagctgcagg aaacgctgga agccaacaat gagcaggcgc gtgaagcgcg ctcgcggttg
    16201 gagaatgcgg tcagcagcat gggtgatctg gaatcaaccc ggcagcgctt ggagggcgaa
    16261 cgccgccagc tgaccgaggc gcgcgacctc gcccgtgatg ctgcgcgtgc ggtgcgcgaa
    16321 cgctcgcatt cgctggcgct caccctggaa tcgcagcgtg cgcagctggc gtcactgagc
    16381 caggccctgg agcgcatggg tacccagcgc gggcagctgg attcgcgcct gggtgaactg
    16441 cactcgcagc tggatgaagg tgattcgccg gtcgaatcgc tgcaggccga gcaccagaac
    16501 gcactggaag aacgggtgcg tgccgaccgc gtgctgaccg aggcgcgcac gctgctcgat
    16561 ggcatcgacg ccgagctgcg caactacgag cagacccgtc atcagcgcga cgagcaggcg
    16621 ctggcccagc gcgagcgtat ttcacagcgc aagctggacc agcaggcgct ggtgctcagc
    16681 gcggacaccc tgcagggcgc ggtggaaaag gccggtttcg tgctgcagga cgtactcaat
    16741 gcactgcccg aagacgcccg cctgggcgac tgggagcagg ccgtgcacca gatcgacggc
    16801 cgcatgcgcc ggctggagcc ggtcaacctg gcggccatcc acgagtacgg cgaggcttcg
    16861 cagcgttcgg agtacctgga tgcgcagcat gtggacctga ccaccgcgct ggagaccctg
    16921 gaggacgcca tccgcaagat cgaccgcgag acccgtggcc gtttcaagga caccttcgac
    16981 cgcgtcaacg caggcgtgca ggcgctgtat ccgcgcctgt tcggtggcgg ccatgcctac
    17041 ctggagctga ccggtgaaga cctgctcgac accggtgtga ccatcatggc gcgtccgccg
    17101 ggcaagcgtg tctccagcat ctcgctgctg tccggtggcg agaaggcgat gactgcggtg
    17161 gcgctggtgt ttgccatctt ccagctgaac ccggcgccgt tctgcctgct ggacgaggtg
    17221 gacgcgccgc tggacgaagc caacgtcggc cgcctggcca acatggtgaa ggaaatgagc
    17281 gagaaggtgc agttcctgtt cgtcagccac aacaaggcca cgatggaagc cgcccaccag
    17341 ctgtcgggcg tgaccatgcg cgagccgggc gtcagccgcc tggtcagcgt ggacctggaa
    17401 gaagccgcgc gattggcggg cgcggcctga cgtgccatcc tagttacctg aatgaactag
    17461 ccggagaacc tatcgaatgt ccgacacggc actgttgcgc atcggcatcc tggccgccgg
    17521 cctgctgttg atcgccgcga tcttcctgtt tggccgtccg aagaagaagc cccaggggcg
    17581 ccgcgtggaa agcgcggagc caagcagtgg cgagcgccgc gagccggtga tgggcgagga
    17641 tggcgtcgcc gtggtcgatg gccgggtcga accgggcatg ggcggcgaag gcgagcaggc
    17701 cgaactcggc ctggccgaca ccgacgccgg ggccagcgat ctcggcaagc gcgccaccca
    17761 ggacttcgac aagatcgtct cgttgttcgt ggccgcccgc gccggcgagc agctgcgcgg
    17821 cgaggacatc gtggtcgcgg ccgaaaagac cggcctggtg tttggccaca tgaatgtctt
    17881 ccaccgcctg gtggaggccc atcccgagcg cggcccgatc ttctcgatgg ccagcatcat
    17941 gaaaccgggc agcttcgaca tggccaatat ccgcgccatg gaaaccccgg cgatcgcctt
    18001 cttcctgacc ctgcccgcgc cgctgaccgc gctggacgcc tgggagaaga tgctgccgac
    18061 cgtgcagcgg atggccgaac tgctggatgg cgtggtgctg gatgacagcc gcaatgccct
    18121 gggccgccag cgcatcgcgc acatccgcga cgaactgcgc gcctacgacc gccagcacca
    18181 ggcaccgccg ctgaccaaga cgccgcgctg gtaagcgcca tggcgtgccg gccaacggtc
    18241 ggcacccacc gtcggtcgtt gttcggtatc cccgggtaga tccacgccat gcgcggatgg
    18301 cgttgtgtag agtcgagcca tgctcgactg gggccttccc tacacatctg accgcattca
    18361 agcgatactc gaccggaccc ggtccggtaa tgctcaggca tgcccagccc acgtctcctg
    18421 aaaggtcgtt ggccgcaatc ccggaatgtc tacgcgatca ccacgatcac tcaccgccgt
    18481 cagcgattct tcgatgacgc cgatctggcg gcactcgcgg tggcgacgct gcagcgcctc
    18541 cagcaggagg gccgatatat caacctcgct tgggtggtca tgccggacca cattcattgg
    18601 ttgatgcagc ttcgcggagg aacgcttgct gcttcggtgc agatcatgaa atcccggtgc
    18661 agcaggttgt caggaaccga cgggccactt tggcagcggg ggtattacga ccacgctgtg
    18721 cgatgtgatg agtccctgcg gagtcaagca ctgtacattg ccgccaaccc tgtccgtgcg
    18781 ggcctggcgg aacagttggg cgagtacccg tttgcgtggt gccgatggtt tgatcgggcc
    18841 ccgtagggta tgagtc
//
LOCUS       DAOKIP010000063        18344 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.063,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000063 DAOKIP010000000
VERSION     DAOKIP010000063.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 18344)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18344)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18344
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.063"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..1553)
                     /locus_tag="QEL58_001872"
     CDS             complement(<1..1553)
                     /locus_tag="QEL58_001872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HDS1676350.1"
                     /translation="MKTWIGGAVLLACTTMASASTPTPLQDLDATVERVRAQFDVPGI
                     AVAVVKDGQVVLERGWGVREQGRPEPVQADTLFAIASNTKAFTATSLNLLAEDGKLKM
                     DDKVIDHLPSFRMSDPFVTGQMTIRDLLSHRSGLSLGAGDLLFWPTTSYSNAEVVQRL
                     GQVPLKGGFRESYAYDNILYAVAQQVIEHVSGMSYQQFLQTRIFDKVGMAGTRYNADH
                     LKPGDTVAVGHAKYDFKDLRTVAPLTWSNNAGAGGIYSSAHDMARWMQVQLAEGKLAD
                     GTPLFTEKSQQQMWRMITPQSIPAPSVPELAPARANFAGYGEGWSLSDYRGQKLVWHT
                     GGWPGMVSRLTLVPGEKLGVVVLTNQEVGAAFNAITLSVLDAYLGGEKHDWVDAYAKA
                     VAKGQGKADEAWAKHQAARDKRSTPSLALAGYTGTFRDRWYGDMQISAEGKGLRLRFM
                     KTAQLSGRLEHWQHDTFIVRWEDRSLNADAFVNFTLDPDGKVRDVRMQPISDLTDFSF
                     DFQDLLFTPV"
     gene            1664..2107
                     /locus_tag="QEL58_001873"
     CDS             1664..2107
                     /locus_tag="QEL58_001873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014036478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HDS1676351.1"
                     /translation="MGENSQPGNGSTIIPCLRYRDALAAIDWLQRAFGFHAQAVYADG
                     ETVFHAQLTFGHGMVMLGSASNQSAWTEHTAMPDEVGGRQTQSACVIVTDADAHYARA
                     KAAGARIVIDIADQDYGGRGYACADPEGYLWWFGSYDPWRADHGQ"
     gene            2104..2979
                     /locus_tag="QEL58_001874"
     CDS             2104..2979
                     /locus_tag="QEL58_001874"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF72 domain-containing protein"
                     /protein_id="HDS1676352.1"
                     /translation="MTVASRQAAIRCGIGGWVFPEWRGGTFYPAGLAQREELAHASRA
                     LRCIEINGTFYRTPTPTQCAQWAAQTPEGFRFSMKAPRYLVQRRDLSSTVEAAAPFLQ
                     AALALGDRLGPLLWQFDQRHPADAGALDALMAQLPKQLDGVPLQHALEVRNAAVHGPA
                     LVAAARRHEVALVIEDSDEAPLHGDISAGFVYARIKRSQARLKEGLPAPVQQCWADRA
                     RRWSQGAPVDDLPRLAEPPPAGPREVYLLCIGAGKARNPAAAMALQRLIDGASDPAPT
                     ASSSPGRTPRPRAAR"
     gene            complement(2900..3514)
                     /locus_tag="QEL58_001875"
     CDS             complement(2900..3514)
                     /locus_tag="QEL58_001875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019184428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Pr6Pr family membrane protein"
                     /protein_id="HDS1676353.1"
                     /translation="MPAGPMFVRGWAALTALVAATSLLLQYLLLLGGPGGDAGVVAAT
                     LRFFGYFTILSNLGVCLGCAWLARGRPLDATVAAAMALCIGVTCLVYMLALQALWRPS
                     GLQWWVDMGLHYAVPLLYLGGWLLLLPRGGLRWRALAVVLWLPLAYLGWAMTLAWLLG
                     QAPYPFLEVQRIGAVAFAINVLRVAAVFVLGWTMLWALDRWRRR"
     gene            3594..4541
                     /locus_tag="QEL58_001876"
     CDS             3594..4541
                     /locus_tag="QEL58_001876"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019304048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HDS1676354.1"
                     /translation="MSTPDTRKALWQIHFCVLLWGVTAILGKLITLPALPLVWWRMLL
                     VTAMLALLPRVWRGLRTLPLRLVAGYAGIGALVALHWLTFYGAVKLANASVAATCIAL
                     APVFTSIIEPWVAKRPFQLRELAFGLAVLPGVALVVGGVPDGMRLGVLIGALSALLVA
                     VFGSLNKRMVSHADPLTVTALELGAGTLTLTLLAPLMPYLLPALASPLWIVPDLHDGI
                     LLLVLAGFCTLLPFALALVALRHLSAYTVQLVTNLEPVYAVLLAVVLLREQHEVTPWF
                     YLGMAIIVGAVFLHPLLNRRRPVQHPEILGTAEARNIAD"
     gene            complement(4572..5732)
                     /locus_tag="QEL58_001877"
     CDS             complement(4572..5732)
                     /locus_tag="QEL58_001877"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008267717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDS1676355.1"
                     /translation="MLQTLAIAHYRSLHGLVLPLRQLNVITGDNGSGKSSLYRALRLL
                     AETAQGGVAAVLAREGGLGSALWAGPETLDRRVMAGEIPLQGGPRQASVGLKLGFATD
                     QFGYAIDLGYPPPSRSAFALDPQIKAEAIWAGPFLRSANLLVDRRGVMVRQRHARGWD
                     LIDDRLSLFDSLFTQVGDPQRMPETIALREYIRRWRFYDHFRSDADAPARQPAMATRT
                     PVLHHDGRDLAAAWVTILEIGDPVGLACSVEDAFPGASVGFEALDGRLALRFHQPGLL
                     RPLSMAELSDGTLRFLLLAAALHTPRPPPLLVLNEPETSLHPDLLPALARLIIAASAR
                     SQVWVVSHASRLIAALEQAPGCHSLHLHKEHGRTLLSGQGLLDVPTWHWPQR"
     gene            complement(5896..6966)
                     /locus_tag="QEL58_001878"
     CDS             complement(5896..6966)
                     /locus_tag="QEL58_001878"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004150736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor domain-containing diguanylate cyclase"
                     /protein_id="HDS1676356.1"
                     /translation="MIKPDKPANEALRLEALYRYRILDSEREKSFDDLVVIAKAVCGT
                     SMAAVTLIDVERQWFKSIQGIDAAENLRSESMCGHAILQPQQIMVVEDALQDIRFHDN
                     PVVTGDPHVRFYAGAPLISSDGLPLGTLCVFDAHPQRLASDKAEALAALSRQVMLVME
                     LRRFALDIQKHMLERDDYERLLSEYQDVLLAQNADLAEQSRTDALTGLPNRRAMAAAL
                     EEAVAMNGAQPAAACVALLDIDHFKHINDFQGHATGDRVLAELGTLLRSHFAGRGMAA
                     RYGGEEFVAVMPATDLHAAERQCEFLRLAVAELPLGFPVTISIGVAQHQSGESVDQML
                     ARADKALYRAKGNGRNRVELAG"
     gene            complement(7101..7823)
                     /locus_tag="QEL58_001879"
     CDS             complement(7101..7823)
                     /locus_tag="QEL58_001879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridine synthase"
                     /protein_id="HDS1676357.1"
                     /translation="MTTRLNKHIADTGFCSRREADRLIAARRVTVNGHAAGTGAVVGE
                     EDQVLVDGQPLRARVARKPGARRHVYIALNKPVGVTCTTETSVKGNIVDFVGHEQRIF
                     PIGRLDKESEGLILMTSNGDIVNQILRAENGHQKEYLVAVNKPVTDEFLRGMARGVRI
                     HDQMTLPCKTSRIAKFGFRITLQQGLNRQIRLMAAEFGYRVTQLRRVRIDNIKIGALK
                     PGQWRNLTEQELQGLLPKQLDW"
     gene            complement(7858..9522)
                     /locus_tag="QEL58_001880"
     CDS             complement(7858..9522)
                     /locus_tag="QEL58_001880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HDS1676358.1"
                     /translation="MGSRQWRYGTGVVLAVLLMWWAIPWPLQAAEAVSGRDYLLVGGA
                     TDAPTPHRACTPQMLSGARQQVEVPAPPGGWSGEPQALDVFNVFAGEVRVQHGDREIC
                     GNMHDARTRDSRFRAGIGLVAVPPAGSHAPFVVSWQTPLKARWVPTLRLGAPSPVQQN
                     DTARLLVRAACIAVAIALALSALMAFLTTRDRSFLVYIAGTTVLVLWQAILGGLSGYP
                     EPWLPVGERGAWWLLSLTAATQALVLPALWRLNGGDRALPRSRPLQAIVLWGLLALAV
                     LVPWLRWGQLAWVAQGLQVTYLLGCGLALLAGVWARWRGDRWAQAGLAALAPMLVLII
                     ADASAAEWLLEYRVEALQLAVTWLLMMAAYAMNQRLGRLRQQRDELRQLAETDGLTGL
                     PNRRAGLQQLARHLAQVDRERGPLVIGFLDIDLFKDINDRHGHAVGDQVLVAVARALR
                     AAVRSQDEVVRMGGEEFLLLMPGMPREAASARLDRLRQRITEAGQALQVPGLEVTASI
                     GLAQWRPGEDDLAGLLRRADHAMYVAKRAGRNRVFDGEELDPAASA"
     gene            complement(9632..12052)
                     /locus_tag="QEL58_001881"
     CDS             complement(9632..12052)
                     /locus_tag="QEL58_001881"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005412713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HDS1676359.1"
                     /translation="MGRSGTDQQSRRVPMTRGLGLRFALLTGMAIGLVALSALIQELQ
                     AASTAWIAGQGYWSRGQQDATAALSRYLARGDAQDLDDARQALQVPLGDLQARLALEQ
                     AEPDEAKARQGFLQGGNARADIPRLVFSFRYARDIGAFREATALWRKTDGDLMAVQRL
                     VDELQLRHDSGPLPIAARDRYLQQLGDLDRRMQVQSQAFSQALLRMATLVRLATLMVA
                     GLSVLAISLMAVALARRVGKDLTEHESRFRAAFYQANVGMLKLDTDGKVIEANQAMAD
                     ILDYRRDVLLQMSLHDLLMDGELVIDGVGRIDWDRQLRPSELRFRRRDGSLVWGRWSG
                     TGVHSSGGLSVFAIIEDVSQNHALAREIEHHASHDPLTGLINRREIERLLERALLQVR
                     SDGGTHSLCYINLDHFKLVNDSFGHAAGDQMLRSFADYLVAAVRDGDWVGRLGADEFA
                     VFLAHAGQDEAKRVLQRVIRNLGQATFPISEGSPQLSCSIGVVEVSADAPDVNWLMSA
                     ADSACYAAKQAGRNRVHCFNENRMALEERRLEAERLQGVSLAMAENRMLLYAQRIARV
                     GDPSYLHYEVLVRMRGTDGSLHLPGQFMPAVERYGMAVALDRHVLGLLFRHLQVCPAH
                     VRQLGLCNVNVSAQSIAEPGFLAFVCDLLERNRALASKLCFEITETAAISNLSQARAF
                     IDAVKARGCRMALDDFGSGLSSFGYLRQLPADILKIDGAFVRDMDTDPVSHATVRAIS
                     ELGRELQMEVVAEWVETAEVAGALTRLGVQGLQGYAIERPQPLERMTLTDLKPFRLVA
                     VNGPQGVG"
     gene            complement(12280..14226)
                     /locus_tag="QEL58_001882"
     CDS             complement(12280..14226)
                     /locus_tag="QEL58_001882"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005412712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HDS1676360.1"
                     /translation="MSQDSQAPLQFAQLGLSEPVMQAVTAIGYETPSPIQAATIPAML
                     EGRDVLGQAQTGTGKTAAFALPVLSNIDLQQIKPQALILAPTRELAIQVAEAFQSYSS
                     KIPGFRVLPVYGGQPYGQQLSALRRGVHIVVGTPGRVIDHLDRSTLDLSELKTLVLDE
                     ADEMLRMGFIDDVEAVLKKLPEQRQVALFSATMPPQIRRIAQTYLQDPVEVTIAAKTT
                     TSANIRQRYWWVSGMHKLDALTRILEVEPFDAMIIFARTKAGTEELASKLQARGLAAA
                     AINGDMQQAQRERTIAMLKEGKLDILVATDVAARGLDVERISHVLNYDIPYDTESYVH
                     RIGRTGRAGRSGEAILFATPREKGMLRQIERATRQPIEEMQLPSVEAVNDTRINKFTS
                     RITETLGAGGLDFYRQLLERFENEQNVPAIEVAAALAKMLQGDTPFLLQPPVRAPREE
                     RAPRERFDRGDRPERGDRFDRNERGPRFERGPRRDDTEGGFEQRPRREVPPRGAPEQG
                     METYRISVGHQHGVKPANIVGAIANEAGLESRFIGRIDIHDDFSLLDLPAQMPPDVLS
                     HLQKVWVSGQQLQMRALAPGEDTNPAPRPFKPRFDKRGPGGPGGPRRGGPGGPGGHGG
                     DRGGDRDSRPPRRDGFKPRGPRSY"
     gene            14494..14715
                     /locus_tag="QEL58_001883"
     CDS             14494..14715
                     /locus_tag="QEL58_001883"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding S4 domain-containing protein"
                     /protein_id="HDS1676361.1"
                     /translation="MQILEFDLDGDYVELKQLLKLADLVTSGGEAKMVISEGQVLVDG
                     EVELRKACKIRAGQVVEFADSQIRVLAAG"
     gene            complement(14727..15905)
                     /gene="ubiM"
                     /locus_tag="QEL58_001884"
     CDS             complement(14727..15905)
                     /gene="ubiM"
                     /locus_tag="QEL58_001884"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004150679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-demethoxyubiquinol-8 5-hydroxylase UbiM"
                     /protein_id="HDS1676362.1"
                     /translation="MRRMDVVVVGAGPAGLCFARALAGSGLQVGLVEVQPRQVLAEAA
                     FDGREIALTHASRQSLEQLGLWQRLAQAEVAELRDARVMNGGSPFALTFASSQVDGQP
                     LGWLVPNHLIRRAAWDAVQGQDGLELFDGRKVLGVQADAQGHVVTLDDGSKLHARLLV
                     AADSRFSATRRMLGIGAQMRDFGKSMLVCRMQVERDHHHTAWEWFGYGRTMALLPLNE
                     GQASAVITLPPRQIEELLAMDEVAFGEAISACFEHRLGRMQPVATPQAYPLVGVYAHR
                     FVGERSALVGDAAVGMHPVTAHGFNLGLASAQRLAQGIVGQQRRGADIAAEGMLARYQ
                     RGHRLASRPLYEATNAIASLYTDDRRPARLLRAAGLRVAQGVAPFRQLIASHLTQRVA
                     "
     gene            complement(15986..16375)
                     /locus_tag="QEL58_001885"
     CDS             complement(15986..16375)
                     /locus_tag="QEL58_001885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MAPEG family protein"
                     /protein_id="HDS1676363.1"
                     /translation="MATELTMLAWSVLLGFVYIFATSTVVTRERGLKWNASARDGQAR
                     PLSALAGRLQRAQANFLETFPFFAAAAIAVVLAGRSNDTTALAAQAYFWARVLYLPLY
                     AAGVPYVRSLVWAVSLLAILALVFALL"
     gene            complement(16387..16932)
                     /locus_tag="QEL58_001886"
     CDS             complement(16387..16932)
                     /locus_tag="QEL58_001886"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4019 domain-containing protein"
                     /protein_id="HDS1676364.1"
                     /translation="MKRVLLLLSLMPFTVLAQVPAPATPAPAPARPAPASPAAAKPAT
                     AGAPALTAAQQAQVQKQDAEMGAAAVKAAQLVDANRAGELWEGASAVARRAVPKAAFV
                     SQLTTERTRLGAMAGRGQPTITRVKYGAGAAVPEGLYINVSFPTRFANSAQPVRELVS
                     FRFDEDQVWRLAGYSLRASAP"
     gene            complement(16991..18154)
                     /locus_tag="QEL58_001887"
     CDS             complement(16991..18154)
                     /locus_tag="QEL58_001887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005408698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676365.1"
                     /translation="MSAKLRWLPLLCLALAGCSQLENPGNVTAADKAARAPASDGENM
                     VSINAADAPLPPPAPRSRADRPWPQAQLENGRAWVSCSTEYAGDAGDGIELEGLQRDQ
                     ISQALAPCAERGLMRVRYSGKINPGFAEMMWRLAVVADEQKIHKRILDLDSSGGQVES
                     AIVAGDSIGESGWTIWVREGSICHSACVFVLAAGDNRLLSGKVGIHRMMRISSKATSR
                     AELNRELHEVYDNVKDYLQRNGVAVGVADLMMTVPNRSLRLLTPDELRQYGLDGTNAV
                     QDDLERIKQMRACGDDFVQRKDAFLIAFDQQCKREGADMESINSCGQALKQRFGFPDA
                     VCPEESPLSEIDVATLPPAPSEPPPVAEQAPAEAGKPAAQADAAVVEGSAHAR"
BASE COUNT         2929 a         6460 c         6061 g         2894 t
ORIGIN      
        1 accggggtga acagcaggtc ctggaaatcg aagctgaaat cagtcaggtc ggagatcggc
       61 tgcatgcgca cgtcgcgtac cttgccgtcc gggtccaggg tgaagttcac gaacgcgtcg
      121 gcgttgagcg agcgatcctc ccagcgcacg atgaaggtgt cgtgctgcca gtgctccagg
      181 cggccgctca gctgcgcggt cttcatgaaa cgcaggcgca ggcccttgcc ttcggcactg
      241 atctgcatgt cgccatacca gcggtcgcgg aacgtcccgg tgtagccggc cagcgccagc
      301 gacggcgtgc tgcgcttgtc ccgtgcagcc tggtgcttgg cccaggcttc atccgccttg
      361 ccctggccct tggccacggc cttggcgtag gcatcgaccc agtcgtgctt ctccccgccc
      421 aggtaggcat cgagcacgct cagggtgatc gcgttgaacg ccgcgcccac ttcctggttg
      481 gtcagcacca ccacgcccag cttctcgccc ggcaccaggg tcagccgcga gaccatgccc
      541 ggccagccac cggtatgcca gaccagcttc tggccgcggt aatcactcag gctccagcct
      601 tcgccgtagc cggcaaagtt ggcccgcgcc ggggccagct ccggcacgct tggcgccggg
      661 atcgactgcg gcgtgatcat ccgccacatc tgctgctggc tcttctcggt gaacaacggc
      721 gtgccatcgg ccagcttgcc ttcggccagc tgcacctgca tccagcgtgc catgtcgtgc
      781 gcgctggaat agatgccacc ggcgccggca ttgttcgacc aggtcagcgg cgcaacggtg
      841 cgcaggtcct tgaaatcgta cttggcgtgg ccgacggcca ccgtgtcgcc cggcttcagg
      901 tgatcggcgt tgtagcgcgt gccggccatg cccaccttgt cgaaaatgcg ggtctgcagg
      961 aactgctggt agctcatgcc cgagacgtgc tcgatcacct gctgggccac cgcgtacagg
     1021 atgttgtcgt aggcatagct ctcgcggaaa ccgcccttca gcgggacctg gcccagccgc
     1081 tgcaccactt cggcgttgct gtaggaggtg gtcggccaga acagcaggtc accggcgccc
     1141 aggctcaggc cactgcggtg cgagagcagg tcgcggatcg tcatctgccc ggtcacgaac
     1201 gggtcggaca tgcggaacga cggcaggtgg tcgatcacct tgtcgtccat cttcagcttg
     1261 ccgtcttcgg ccagcaggtt cagcgatgtg gcagtgaacg ccttggtgtt ggacgcaatg
     1321 gcaaacagcg tgtcggcctg caccggctcc ggcctgccct gctcgcgcac gccccagccg
     1381 cgttccagca ccacctggcc atccttgacc acggccacgg caatgccggg cacgtcgaac
     1441 tgcgcgcgca cgcgctcgac cgtcgcatcc agatcctgca gcggcgtcgg ggtcgacgcg
     1501 ctcgccatgg tcgtgcaggc cagcagcacg gcgcctccaa tccaggtttt catccagcac
     1561 catctccgaa caggggtcgc ggccatgtgc aggccgtcac cggggtttcg cggaatggta
     1621 acggtcgccg gcgcaccctg ccctgtgcca taggaggggt gtcatgggcg agaacagcca
     1681 gccgggcaac ggctccacca tcattccgtg cctgcgctac cgcgacgcgc tggccgccat
     1741 cgactggctg cagcgcgcct tcggcttcca cgcccaggcc gtctacgccg atggcgagac
     1801 cgtgttccat gcgcagctga ccttcggcca cggcatggtc atgctcggtt cggccagcaa
     1861 ccagagtgcg tggaccgagc acaccgccat gcctgacgag gtcggtggcc gccagaccca
     1921 gagcgcgtgc gtgatcgtca ccgatgccga tgcgcactac gcccgcgcca aggccgccgg
     1981 agcacgcatc gtcatcgaca tcgccgacca ggactacggt ggtcgcggct acgcctgcgc
     2041 cgacccggaa ggctatctgt ggtggttcgg cagctacgac ccgtggcgcg cggaccacgg
     2101 ccagtgacgg tcgcttcccg gcaggcggcc atccgctgtg gcatcggtgg ctgggtgttc
     2161 cccgaatggc gcggcggcac gttctatccg gcggggcttg cgcagcgcga agaacttgcg
     2221 catgccagcc gtgcgttgcg ctgcatcgag atcaacggca ccttctaccg cacacctaca
     2281 ccgacccaat gcgcgcaatg ggcggcgcag acgccggagg gcttccgatt ctcgatgaag
     2341 gcgccgcgtt acctggtgca gcgccgcgac ctgtccagca cggtggaggc cgccgccccg
     2401 ttcctgcagg ctgcgctcgc gctcggcgac cggctcggtc cgttgctgtg gcagttcgat
     2461 cagcgccatc cggccgatgc cggtgcactg gacgcgctga tggctcagct gccgaagcag
     2521 ctggatggcg tgccgctgca gcacgcgctg gaagtgcgca atgcagcggt gcacggtccg
     2581 gcgctggttg ccgccgcccg ccgtcatgag gtggccctgg tgatcgagga cagcgacgag
     2641 gcaccactgc acggcgacat cagtgccggt ttcgtctatg cgcgaatcaa gcgcagccag
     2701 gcccgcttga aggagggcct gccagcgccg gtgcagcaat gctgggccga ccgcgcacga
     2761 cgctggtcac aaggcgcgcc cgtggacgac ctgccccgcc tggccgaacc gcccccggcc
     2821 gggccccgcg aggtctacct gctgtgcatc ggcgcgggca aggcacgcaa tccggcggcg
     2881 gcgatggcgt tgcagcggct catcgacggc gccagcgatc cagcgcccac agcatcgtcc
     2941 agcccaggac gaacaccgcg gccacgcgca gcacgttgat cgcgaaggcc accgcgccga
     3001 tccgttgcac ctcaaggaac gggtacggcg cctggcccag cagccaggcc agggtcatcg
     3061 cccaaccgag ataggccaac ggcagccaca gcaccaccgc caatgcacgc cagcgcaggc
     3121 cgccacgcgg caacagcagc agccagccgc ccaggtacaa cagtggcacg gcgtagtgca
     3181 gccccatatc cacccaccac tgcaggccac tgggtcgcca aagcgcctgc aaggccagca
     3241 tgtagaccag acaggtcacg ccgatgcaca gcgccatggc cgcggccacg gtcgcgtcca
     3301 gcgggcggcc gcgtgccagc catgcacacc ccaggcacac gcccagattg ctgaggatgg
     3361 tgaagtaacc gaagaagcgc agggtcgccg cgaccacgcc cgcatcgccg ccgggcccgc
     3421 ccagcagcaa caggtactgc agcagcagcg aggtggcagc gaccagggcg gtcaacgccg
     3481 cccatccacg cacgaacatc gggcctgcag gcatgcggat acctcgccag gaacggggcg
     3541 cagtggcgac cgggaccatc gccgcgaacc tgcgcttgcc gcacaataca cggatgagca
     3601 cacccgacac ccgcaaagca ctctggcaga tccatttctg tgtcctgctg tggggcgtca
     3661 ccgccatcct cggcaagctg atcaccctgc ccgcgctgcc gttggtgtgg tggcgcatgc
     3721 tgctggtgac ggcgatgctg gccctgctgc cgcgggtctg gcgcgggttg cgcaccctgc
     3781 ccttgcgact ggtggccggt tacgccggca tcggtgcgct ggtcgccctg cactggctga
     3841 ccttctatgg cgcggtgaaa ctggccaatg cgtcggtggc cgccacctgc atcgcgctgg
     3901 caccggtgtt cacctcgatc atcgaaccgt gggtggccaa gcggccgttc cagctgcgcg
     3961 aactggcgtt cggcctggcc gtgctgcccg gcgtggcgct ggtggtcggt ggcgtacccg
     4021 atggcatgcg cctgggtgtg ttgatcggcg cactttcggc actgctggtg gcggtgttcg
     4081 gctcgctcaa caaacgcatg gtcagccatg ccgatccgct gacagtcacc gcgctggagc
     4141 tgggtgcggg caccctcacc ctgaccctgc tggcaccgct gatgccgtac ctgctgccgg
     4201 cactggccag cccgctgtgg atcgtcccgg acctgcacga cggcatcctg ctgctggtgc
     4261 tggccggctt ctgcacgctg ctgccgttcg cgctggcgct ggtcgcgctg cgccacctga
     4321 gcgcctacac ggtgcagctg gtgaccaacc tggaaccggt ctatgccgtg ctgctggcgg
     4381 tggtactgct gcgcgaacag cacgaggtca ccccgtggtt ctacctgggc atggcgatca
     4441 tcgtcggcgc ggtgttcctg catccgctgc tgaatcgacg caggccggtg cagcacccgg
     4501 agattctcgg tacggccgaa gcacgcaaca tcgctgattg aacgcattca cgcggggcat
     4561 cgatcgccgt atcaccgctg cggccagtgc catgtcggaa catccaggag gccctgtccg
     4621 ctcagcagcg tgcgcccgtg ttccttgtgc agatgcagcg aatggcatcc cggcgcctgt
     4681 tccagcgccg cgatcaggcg gctggcgtgt gataccaccc atacctggct gcgcgcactg
     4741 gcggcaatga tcagccgtgc cagtgccggc agcaggtccg gatgcaggct ggtctccggc
     4801 tcgttcagca ccagcagcgg cggcggccgt ggcgtgtgca gggcggcggc cagcagcagg
     4861 aagcgcaggg tgccatcgga cagttccgcc atcgacaacg gccgcagcag gccgggctgg
     4921 tggaagcgca gggccagccg accgtccagc gcctcaaagc ccaccgaggc ccccgggaag
     4981 gcatcctcaa cgctgcatgc caacccgacc ggatctccga tctcgaggat ggtgacccag
     5041 gccgcggcca gatcgcggcc gtcgtgatgc agcaccggcg tccgcgtggc catcgccggc
     5101 tgtcgcgccg gcgcatcggc atcgctgcgg aagtgatcat agaagcgcca gcggcggatg
     5161 tactcacgca gggcgatggt ttccggcatg cgctgcggat caccgacctg ggtgaacagg
     5221 ctgtcgaaca gcgacaagcg gtcatcgatc agatcccagc cgcgcgcatg gcgttgccgt
     5281 accatcaccc cgcgacgatc gaccagcagg ttggcgctgc gcaggaacgg cccggcccag
     5341 atcgcctcgg ccttgatctg cgggtccagt gcgaacgccg aacgactggg cggcgggtaa
     5401 cccagatcga tggcgtagcc gaattggtcg gtggcaaatc ccagtttcag gcccacagaa
     5461 gcctgccggg ggccgccctg cagcggaatc tcgccggcca tgacccgccg atcaagggtt
     5521 tccgggccgg cccatagcgc cgagccgagc ccgccttcac gggccagcac cgccgcaacg
     5581 ccgccctgtg cggtttccgc cagcaggcgc agcgcgcggt acaggctgga tttgccgcta
     5641 ccgttgtcgc cggtgatcac attcaactgc cgcagcggca gcaccagccc atgcagcgag
     5701 cgatagtgcg cgatggccag ggtctgcagc atgctcgagg tccgtggaaa caggaccgcc
     5761 atgctggccg gtcctgatcg cacgagctgc gacgcgatgt gaatcgggaa gagcatccac
     5821 gcatggcgtg gatctactgg aacgggatcg aatcaccacg catcgcatgc gttcagcgcg
     5881 cgagttgccg gtgtttcagc cggccagttc cacccggttg cggccgttgc ccttggcgcg
     5941 gtacagcgcc ttgtcggcgc gtgccagcat ctggtccacg ctttcgccgg actggtgctg
     6001 ggcaacgccg atgctgatgg tcaccgggaa accgagcggc agctcggcta ccgccaggcg
     6061 caggaactcg cactgccgtt cggccgcatg caggtcggtg gccggcatca ccgcgacaaa
     6121 ctcctcgcca ccatagcgtg ccgccatgcc gcgaccggcg aagtgcgagc gcagcagcgt
     6181 gcccagttcg gccagcaccc ggtcgccagt ggcatggccc tggaagtcgt tgatgtgctt
     6241 gaaatggtcg atgtccagca gcgcgacaca ggctgcagcg ggctgcgcgc cgttcatcgc
     6301 cacggcctct tccagcgccg ccgccatcgc gcgccggttg ggcaggccgg tcagcgcgtc
     6361 ggtgcggctc tgttcggcca ggtcggcatt ctgggccagc agcacgtcct ggtactccga
     6421 cagcagtcgc tcgtaatcgt cgcgttccag catgtgcttc tggatgtcga gcgcgaaacg
     6481 gcgcagctcc atcaccagca tcacctgccg cgacagcgcg gccaaggcct cggccttgtc
     6541 actggccagg cgctgcggat gcgcgtcgaa cacgcacagc gtacccagcg gcaggccgtc
     6601 ggaactgatc aggggcgcac ccgcgtagaa gcggacatgc ggatcgccgg tcaccaccgg
     6661 attgtcatgg aagcggatgt cctgcagcgc gtcctcgacc accatgatct gttgcggctg
     6721 caggatggcg tggccgcaca tcgattcgct gcgcaggttc tccgcggcat caatgccctg
     6781 gatcgacttg aaccattgcc gctcgacgtc gatcagggtg acggcggcca tcgaggtgcc
     6841 gcagaccgcc ttggcgatca ccaccaggtc atcgaaggat ttctcgcgct ccgaatccag
     6901 gatgcggtag cggtacagcg cctcaagccg aagggcttcg ttggcaggct tgtcgggctt
     6961 gatcatgcag cgtcatgttc cggcaggtca ctgcgaagtc tagccgatgc gggtgcgcaa
     7021 tccgcgtgcc gggtggtgcc ggccgcgggc cggcatcccg ggtacatcga aggcaccttg
     7081 cagccggcga gcggccggcc ctaccagtcc agctgcttcg gcagcaggcc ctgcagctcc
     7141 tgctcggtca ggttgcgcca ctggcccggc ttcagcgcac cgatcttgat gttgtcgatg
     7201 cgcacgcggc gcagctgggt cacgcggtag ccgaactcgg ccgccatcag gcggatctgc
     7261 cggttcaggc cctgctgcag ggtgatgcgg aaaccgaact tggcgatccg cgaagtcttg
     7321 catggcagcg tcatctggtc gtggatgcgc acgccgcgcg ccatgccgcg caggaactcg
     7381 tcggtgaccg gcttgttcac cgccaccagg tattccttct ggtgcccgtt ctcggcacgc
     7441 aggatctggt tgacgatgtc gccgttgctg gtcatcagga tcagcccttc cgactccttg
     7501 tccaggcggc cgatcgggaa gatgcgctgt tcgtggccca cgaagtcgac gatgttgccc
     7561 ttgaccgacg tttcggtggt gcaggtgacg cccaccggct tgttcagcgc gatgtagacg
     7621 tggcggcggg cgccgggctt gcgggcgacg cgcgcgcgca gcggctggcc gtcgaccagc
     7681 acctggtctt cctcgcccac caccgcgccg gtgccggccg catggccgtt gacggtgacg
     7741 cggcgggcgg cgatcaggcg atcggcctcg cggcgggagc agaagccggt gtcggcgata
     7801 tgtttgttga gtcgggtggt catcgcccta ttatccggca tcgccgcccg ccgcgcttca
     7861 tgccgatgca gccggatcaa gctcttcgcc gtcgaagacc cggttgcggc cggcgcgctt
     7921 ggccacgtac atggcatggt cggcccggcg cagcagcccg gccagatcgt cctcgcccgg
     7981 tcgccattgc gccaatccaa tgctggcggt cacttccagc cccggtacct gcagtgcctg
     8041 gccggcctcg gtgatgcgct ggcgcagtcg gtccagccgc gccgacgcgg cttcgcgcgg
     8101 catgcccggc atcagcagca ggaactcctc gccgcccatc cgcaccactt cgtcctggct
     8161 gcgcaccgcc gcgcgcaggg cgcgcgcgac cgcgaccagt acctggtcac ccaccgcatg
     8221 gccgtggcga tcgttgatgt ccttgaacag gtcgatgtcg aggaagccga tcaccagcgg
     8281 gccgcgctca cggtcaacct gtgccaggtg acgggccagc tgctgcagtc ctgcgcgccg
     8341 gttgggcagc ccggtcaggc catcggtctc ggccagctgg cgcagctcat cgcgctgctg
     8401 gcgcagccgc ccgaggcgtt ggttcatggc gtaggcggcc atcatcagca gccaggtcac
     8461 cgccagctgc agcgcctcca cccggtactc cagcaaccat tcggctgcac tggcgtcggc
     8521 gatgatcaat accagcatcg gcgccagcgc ggccagcccg gcctgcgccc agcggtcgcc
     8581 gcgccagcgc gcccagaccc cggccagcaa cgccaggcca caccccagca gataggtcac
     8641 ctgcaggccc tgtgcgaccc aggccagctg gccccagcgc agccacggca ccagcacggc
     8701 cagcgccagc agcccccaca gcacgatcgc ctgcagcggc cgcgaacggg gcagcgcgcg
     8761 gtcgccaccg ttcagccgcc acagcgccgg cagcaccagt gcctgggtgg ccgcggtcag
     8821 cgaaagcaac caccaggccc cgcgctcgcc caccggcagc cagggctccg ggtagccgct
     8881 gaggccaccg aggatcgcct gccacagcac cagcacggtg gtgccggcga tgtagaccag
     8941 gaaactgcgg tcgcgcgtgg tcaggaacgc catcagcgcc gacagcgcca aggcgatggc
     9001 cacggcaatg caggcggcgc gcaccagcag gcgggcggtg tcgttctgct gcaccgggct
     9061 gggcgcgccc agccgcaggg tcggaaccca gcgcgccttc agcggcgtct gccaggagac
     9121 cacgaatggc gcgtggctgc cggccggcgg taccgcgacc aggccgatgc ctgcgcggaa
     9181 gcgcgaatcg cgggtgcggg catcgtgcat gttgccgcag atttcgcggt caccgtgctg
     9241 gacccggacc tcgccggcga acacgttgaa cacgtccagc gcctgtggct cgcccgacca
     9301 gcccccgggc ggcgcgggaa cttccacctg ctggcgggca ccggacagca tctgcggcgt
     9361 gcacgcgcga tgcggggtcg gcgcgtcggt ggcgcccccg accagcaggt aatcgcggcc
     9421 cgatacggcc tcggcagcct gaagcggcca cggtatcgcc caccacatca gcaggacggc
     9481 cagcaccact cctgttccat accgccactg cctgctgccc acgccacgtc ctgttcctgc
     9541 ttacgtccgc gcccactgca cgtcgcccct ggcgcgcatt atcgcagccg ggcgcgccgc
     9601 gcacgtgtag accaaagtcg ccgccggccg ttcagcccac gccctgcggc ccgttcaccg
     9661 ccaccagccg gaagggcttc aggtcggtca gggtcatccg ttccagcggc tgcggccgtt
     9721 cgatcgcata gccctgcagg ccctgtaccc ccagcctggt cagcgcgccg gccacctcgg
     9781 cggtctccac ccactcggcc accacttcca tctgcagctc gcgccccagc tcgctgatcg
     9841 cccgcacggt ggcgtggctg accggatcgg tgtccatgtc gcgcacgaat gcaccatcga
     9901 tcttcaggat gtcggccggc agctggcgca ggtagccgaa cgaggacagg ccggaaccga
     9961 agtcgtccag cgccatccgg cagccccgcg ccttcaccgc atcgatgaag gcgcgcgcct
    10021 ggctgaggtt gctgatcgcg gcagtctcgg taatctcgaa gcacagcttg gacgccagtg
    10081 cgcggttgcg ctcgagcagg tcgcagacga acgccaggaa tcctggctcg gcgatcgact
    10141 gggctgaaac gttgacgttg cacaggccca gctggcgcac gtgcgccggg cagacctgca
    10201 ggtgccggaa cagcagcccg agcacatggc gatccagcgc cacggccatg ccgtagcgct
    10261 ccaccgccgg catgaactgg ccgggcagat gcaggctgcc gtcggtgccg cgcatgcgca
    10321 ccagtacctc gtagtgcagg taggacggat ctcccacccg ggcgatgcgc tgcgcataca
    10381 gcagcatgcg gttctcggcc atcgccaggc tgacgccctg caggcgttcg gcctccaggc
    10441 gccgttcttc cagcgccatg cggttctcgt tgaagcagtg cacgcggttg cggcccgcct
    10501 gcttggccgc atagcaggcg ctgtcggcgg cactcatcag ccagttcacg tcgggggcat
    10561 cggcactgac ctcgaccacg ccgatgctgc agctcagctg cgggctgccc tcgctgatcg
    10621 ggaaggtggc ctggcccaga ttgcggatca cccgctgcag cacccgcttg gcttcgtcct
    10681 ggccggcatg ggcgaggaac acggcgaact catcggcgcc gagccggccg acccagtcgc
    10741 catcgcgcac ggccgccacc aggtaatcgg cgaaactgcg cagcatctga tcgccggccg
    10801 catggccgaa gctgtcgttg accagcttga aatgatccag gttgatgtag cacagcgaat
    10861 gcgtgccacc gtcgctgcgc acctgcagca gcgcgcgttc cagcaggcgt tcgatctcgc
    10921 ggcggttgat caggccggtc agcggatcgt ggctggcgtg atgctcgatc tcacgtgcca
    10981 gcgcatggtt ctggctgacg tcctcgatga tcgcgaacac cgacagcccc ccgctgctgt
    11041 gcacgccggt accactccag cgcccccaga ccaggctgcc gtcgcgccgc cggaagcgca
    11101 gttcgcttgg ccgcagctgc cggtcccagt cgatgcggcc gacaccgtcg atgaccagtt
    11161 cgccgtccat caacagatcg tgcagtgaca tctgcagcag cacatcgcga cgataatcga
    11221 gaatgtccgc catggcctgg ttggcctcga tcaccttgcc atcggtgtcg agcttgagca
    11281 tgcccacgtt ggcctggtag aacgccgcgc ggaaacggct ctcgtgctcg gtcaggtcct
    11341 tgccgacgcg acgcgccagc gccacggcca tcaggctgat cgcaagcacg gacaggcccg
    11401 caaccatcaa cgtggccagc ctcaccagcg tcgccatccg caacagcgcc tgcgagaacg
    11461 cctggctctg cacctgcatc cgccgatcaa ggtcacccag ttgctgcagg tagcgatcac
    11521 gcgcggcgat cggcagcggg ccactgtcgt gccgcagctg caattcatcg accaggcgct
    11581 gcaccgccat caggtcgccg tcggtcttcc gccacagcgc ggttgcttcg cggaaggcac
    11641 cgatatcgcg tgcatagcgg aacgagaaca ccaggcgcgg gatatcggcg cgcgcgttgc
    11701 cgccctgcag gaacccctgc ctggccttgg cttcatccgg ctcagcctgc tccagcgcca
    11761 gccgcgcctg cagatcgccc aacggcacct gcagggcctg gcgcgcgtcg tccaggtcct
    11821 gggcatcgcc ccgcgccagg taacgactga gcgcggcggt tgcatcctgc tgaccgcgcg
    11881 accagtagcc ctggccggca atccaggcgg tggaggccgc ctgcagttcc tggatcagcg
    11941 cggacagtgc gaccaatcca atcgccatgc ccgtcagcaa cgcaaatcgc agtcccaggc
    12001 cacgggtcat gggaacccgt cggctctgct ggtccgtgcc actcctaccc atcccggatc
    12061 cccccgaatg tgctgcggtg acaacctccc ttggaactgg ctcagcctag gaccgggaat
    12121 gtgttgacca tgcgaaaaag gggacggagg ggattaagtc gtttatggca taagcacctg
    12181 gcctgccatt tacgacttaa tcccctccgt cccctttttg cgggcccgga acgggcaacg
    12241 ccagcccgaa ggctggcgtt gtcagggctg cggtgcggct cagtagctgc gcgggccgcg
    12301 cggcttgaag ccgtcacgac gcggcgggcg gctgtcgcgg tcaccgccgc ggtcgccacc
    12361 gtgaccaccc ggaccacccg ggccgccacg acgcgggcca cccgggccgc ccggaccacg
    12421 cttgtcgaag cgcggcttga acggacgcgg ggccgggttg gtgtcttcac ccggcgccag
    12481 cgcgcgcatc tgcagctgct ggcccgacac ccacaccttc tgcaggtgcg acagcacgtc
    12541 cggcggcatc tgtgccggca ggtccagcag cgagaaatcg tcatggatgt cgatgcggcc
    12601 gatgaagcgg ctttccaggc cggcctcgtt ggcgatggcg ccgacgatgt tggccggctt
    12661 cacgccatgc tggtggccga ccgaaatgcg gtaggtctcc atgccctgct ccggcgcgcc
    12721 acgcggcgga acctcacggc gcgggcgctg ctcgaaacca ccttcggtat cgtcacgacg
    12781 cgggccgcgc tcgaaacgcg ggccacgctc gttgcggtcg aagcgatcgc cacgctccgg
    12841 gcggtcgcca cggtcgaagc gctcgcgcgg tgcacgctct tcgcgcggcg cacgcaccgg
    12901 cggctgcagc aggaacgggg tgtcaccctg cagcatcttg gccagcgcgg cagccacttc
    12961 gatggccggc acgttctgct cgttctcgaa gcgctccagc agctggcggt agaagtccag
    13021 gccaccggca ccgagggttt cggtgatgcg cgaggtgaac ttgttgatgc gggtatcgtt
    13081 gaccgcttcc acgctcggca gctgcatctc ctcgatcggc tggcgggtag cgcgctcgat
    13141 ctggcgcagc atgcccttct cgcgcggggt ggcgaacagg atcgcttcac cgctgcggcc
    13201 ggcgcggccg gtacggccga tgcggtgcac gtagctttcg gtgtcgtacg ggatgtcgta
    13261 gttcagcacg tggctgatgc gctccacgtc caggccgcgg gcggccacgt cggtggcaac
    13321 caggatgtcc agcttgcctt ccttcagcat ggcgatggtg cgctcacgct gggcctgctg
    13381 catgtcaccg ttgatcgcgg ccgcggccag gccacgggcc tgcagcttgc tggccagttc
    13441 ttcggtgccg gccttggtgc gggcgaagat gatcatcgca tcgaacggct cgacttccag
    13501 gatgcgggtc agcgcgtcca gcttgtgcat gccgctcacc caccagtaac gctggcggat
    13561 gttggccgag gtggtggtct tggccgcgat ggtcacttcc accgggtcct gcaggtaggt
    13621 ctgcgcgatg cggcggatct gcggcggcat ggtggccgag aacagcgcaa cctggcgctg
    13681 ttccggcagc ttcttcagca cggcctcgac gtcatcgatg aagcccatgc gcagcatttc
    13741 atcggcttcg tccagcacca gcgtcttcag ctcggacagg tccagggtgc tgcggtcgag
    13801 atggtcgatc acgcggccgg gagtaccgac cacgatgtgc acgccgcggc gcagcgccga
    13861 cagctgctgg ccatagggct ggccgccgta caccggcagc acgcggaagc cgggaatctt
    13921 cgacgaatag gactggaacg cctcggccac ctggatggcc agctcgcggg tcggcgccag
    13981 gatcagggcc tggggcttga tctgctgcag gtcgatgttg gacagtaccg gcagtgcgaa
    14041 cgctgcggtc ttgccggtgc cggtctgggc ctggcccagc acgtcgcggc cttccagcat
    14101 cgccgggatg gtggcggcct ggatcggcga cggggtttcg tagccgatgg cggtgaccgc
    14161 ctgcatcacg ggttcggaca ggccgagctg cgcaaactgc agcggcgctt gggaatcttg
    14221 ggacatgggg aactccaaag gcactgccgt cgttctggca gtgcgataaa aaagggatgg
    14281 tccgcgcttt gggcgccctt cttatcgcgt gccctggcgc tgctcggtcg gaggagattt
    14341 cactcgctca gagcggaatg ataccgcatt gatcctgaac gaggcgtaca gcttttccgg
    14401 gcgcgtgcgg tcatgcccgg tgctggcgca caatacgcgc cctctttccg gcccggccac
    14461 cggcctgcgc cctcttccca ggaaccccgc tccatgcaga ttctcgaatt cgacctcgac
    14521 ggcgactacg tcgaactcaa gcagctgctc aagctggccg acctggtcac cagcggcggc
    14581 gaggccaaga tggtcatcag cgaaggccag gtattggtcg acggtgaggt cgaactgcgc
    14641 aaggcctgca agatccgcgc tggccaggtg gtcgagttcg ccgacagcca gatccgcgtg
    14701 ctggctgccg gctgatctga acccgttcag gccacgcgct gggtcaggtg cgaggcgatc
    14761 aattgcctga acggcgccac gccctgcgcc acgcgcaggc cggccgcacg cagcagccgc
    14821 gcagggcgtc gatcgtcggt gtacaggctg gcgatcgcgt tggtggcctc gtacaacggc
    14881 cgcgacgcca gtcgatggcc acgctgatag cgggccagca tgccttcggc cgcgatgtcg
    14941 gcaccacgcc gctgctgccc gacgatgccc tgcgccagcc gctgtgcgct ggccaggccc
    15001 aggttgaagc catgcgcggt gaccgggtgc atgcccaccg ccgcatcgcc gaccagcgca
    15061 gagcgctcgc ccacgaaccg gtgcgcgtac acccctacca gcggatacgc ctgcggcgtg
    15121 gccaccggct gcatccggcc caggcggtgt tcgaagcagg cactgatggc ctcaccgaac
    15181 gccacctcgt ccatcgccag cagttcctcg atctgccgcg gcggcagcgt gatcaccgcc
    15241 gatgcctggc cctcgttgag cggcagcaat gccatggtgc ggccatagcc gaaccactcc
    15301 cacgcagtgt ggtggtgatc gcgctcgacc tgcatgcggc agaccagcat cgatttgccg
    15361 aagtcacgca tctgcgcgcc gatgccgagc atgcgacggg ttgccgaaaa gcggctgtcg
    15421 gcagccacca gcagccgcgc gtgcagcttg ctgccgtcgt ccagcgtaac cacgtggccc
    15481 tgtgcatcgg cctgcacgcc cagcaccttg cggccatcga acaactccag cccgtcctgg
    15541 ccctgcacgg catcccacgc ggcgcggcgg atcagatggt tgggcaccag ccagcccagc
    15601 ggctggccgt cgacctggct gctggcgaag gtcagcgcga acggcgagcc gccgttcatc
    15661 acccttgcgt cgcgcagctc ggccacttcg gcctgcgcca ggcgctgcca cagccccagc
    15721 tgctccaggc tctgccgcga ggcatgggtc agcgcgatct cacgaccatc gaaggccgcc
    15781 tcggccagta cctggcgcgg ctgcacctcc accagcccga cctgcaggcc gctaccggcc
    15841 agcgcgcgtg cgaagcacag acccgccggg cccgcgccga ccaccaccac gtccatcctg
    15901 cgcatgcgcg cctcctgccg ttgatccagt ccgcgccagc atagcgccac gcagctgacc
    15961 ggccttgatc tggatcaggc ccggctcaca acaacgcgaa caccagcgcc aggatggcca
    16021 gcagcgatac cgcccagacc aggctgcgca catagggcac gccggcggca tacagcggca
    16081 gatagagcac tcgtgcccag aagtaggcct gcgcggccaa tgcggtggtg tcgttgctgc
    16141 gcccggccag caccaccgcg atcgcggcgg cggcgaagaa cgggaaggtc tccaggaagt
    16201 tggcctgggc ccgctgcagg cggccggcca gcgcactgag cggccgggcc tggccatcac
    16261 gcgccgaggc attccacttc aggccacgct cgcgggtgac cacggtggag gtagcgaaga
    16321 tgtagacaaa gcccagcagc accgaccagg ccagcatcgt cagttcagtt gccatcgctg
    16381 tgctcctcag ggtgccgatg cacgcaggct gtaaccggcg aggcgccaca cctggtcctc
    16441 gtcgaaacgg aacgacacca gttcgcgtac cggctgcgcg ctgttggcga aacgggttgg
    16501 gaagctgacg ttgatgtaca ggccttcggg cacggcggca ccggcgccgt acttgacccg
    16561 ggtgatggtc ggctggccgc ggccggccat cgcgcccaac cgcgtgcgct cggtggtcag
    16621 ctggctgacg aaggccgcct tgggcaccgc acgtcgcgcg acggcggagg cgccttccca
    16681 caattcaccg gcacggttgg catcgaccag ctgcgccgcc ttcactgcgg ccgcgcccat
    16741 ttccgcgtcc tgcttctgca cctgcgcctg ctgcgcggcg gtcaacgccg gggcaccggc
    16801 ggtggccggc ttcgcggccg ccggcgatgc cggcgccggg cgcgcgggtg ccggggcagg
    16861 agtggccggc gcaggcacct gcgccaacac agtgaagggc atcagggaca gcagcaggag
    16921 cacgcgcttc atggacaccg ccggttaccg ggaaagaacc gcagtctacg ccagcgcagt
    16981 gagctgttcg tcagcgcgcg tgggcgctgc cctcgaccac cgcagcgtcg gcctgcgcgg
    17041 caggctttcc ggcctccgca ggagcctgct cggccaccgg cggtggctcg gacggtgccg
    17101 gcggcagcgt ggccacatcg atctccgaca gcgggctctc ttcaggacac accgcatccg
    17161 ggaaaccgaa gcgctgcttc agtgcctggc cacagctgtt gatcgactcc atgtcagcgc
    17221 cttcgcgctt gcactgctgg tcgaaggcga tcaggaacgc atccttgcgc tgtacgaaat
    17281 catcgccgca ggcgcgcatc tgcttgatcc gctccaggtc atcctgcacc gcgttggtgc
    17341 cgtccaggcc gtactggcgc agctcgtcgg gggtcagcag gcgcaggctg cggttgggca
    17401 cggtcatcat cagatcggcc acgcctaccg ccacgccgtt gcgctgcagg taatccttca
    17461 cgttgtcgta gacctcgtgc agctctcggt tgagctcggc gcgcgaggtg gccttggaac
    17521 tgatgcgcat catgcggtgg atgccgacct tgcctgacag caggcggttg tcgccggcag
    17581 ccagcacgaa cacgcaggcg ctgtggcaga tcgagccctc gcgcacccag atcgtccagc
    17641 ccgattcacc gatgctgtca ccggccacga tcgccgattc cacctggccg ccgctggaat
    17701 ccagatcgag gatgcgcttg tggatcttct gctcatcggc aaccacggcc agccgccaca
    17761 tcatctcggc gaagcccgga ttgatctttc cggaatagcg cacgcgcatc aggccacgct
    17821 cggcgcaggg cgccagcgcc tggctgatct gatcgcgctg caggccctcc agctcgatgc
    17881 catcaccggc gtcgccggcg tactcggtgc tgcagctgac ccaggcgcgg ccattctcca
    17941 gttgcgcctg cggccacggc cgatcggccc ggctgcgtgg tgctggcggc ggtagcggcg
    18001 cgtcggccgc attgatcgac accatgttct cgccatcgct ggccggcgcc cgcgccgcct
    18061 tgtcggcagc ggtcacattg cccggattct ccagctgact gcagcccgcc agggccaggc
    18121 acaacagggg caaccagcgg agtttggcgg acatcgggca accggccttc aaggaagcaa
    18181 gggccacagt ctacctgtcc aaaccgcgca ttcagcgcgc ggcactgaac cccttctgac
    18241 ccttgggaaa gcgtgtcgac caaggtcgac acccaccaac agcaaaagcg tgccgaccaa
    18301 cggtcggcac ccaccaacag cagcgaccaa ctgtcagagg tggg
//
LOCUS       DAOKIP010000064        18112 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.064,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000064 DAOKIP010000000
VERSION     DAOKIP010000064.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 18112)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18112)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18112
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.064"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(8..1897)
                     /gene="parE"
                     /locus_tag="QEL58_001888"
     CDS             complement(8..1897)
                     /gene="parE"
                     /locus_tag="QEL58_001888"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019237730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit B"
                     /protein_id="HDS1676366.1"
                     /translation="MNARYNAADIEVLSGLDPVKRRPGMYTDTARPNHLAQEVIDNSV
                     DEALAGHARSIEITLYKDGSVEVSDDGRGMPVDIHPEEKIPGVELILTRLHAGGKFSN
                     NNYTFSGGLHGVGVSVVNALSTLVEVHIKREGAEHRITFRNGDRATPLEVVGSVGKKN
                     TGTRVRFWPDPKYFDTPKFAVRALKHLLRAKAVLCPGLTVKLTDEATGEVDTWYYEDG
                     LRDYLKLELGERESLPADLFVGNLKKDTEVVDWAVAWLPEGELVQESYVNLIPTAQHG
                     THVNGLRTGLTEALREFCDFRNLLPRGVKLAPEDVWDRVSFVLSLKMTDPQFSGQTKE
                     RLSSRQAAGFVEGAAHDAFSLLLNQNVELGEKIAQIAIERASARLKTEKLVVRKKVTQ
                     GPALPGKLADCISQDLSRTELFLVEGDSAGGSAKQARDKDFQAIMPLRGKILNTWEVS
                     SNSVLASEEVHNLAIAIGCDPGKDDISGLRYGKVIILADADSDGLHIATLLTALFLKH
                     FPALVDAGHVFVAMPPLFRIDVGKQVFYALDEEEKRSMLDKIEREKIKGAINVTRFKG
                     LGEMNPPQLRESTIHPDTRRLVQLTVDDREQTSSLMDMLLAKKRASDRKGWLETKGDL
                     ASLEV"
     gene            2069..2302
                     /locus_tag="QEL58_001889"
     CDS             2069..2302
                     /locus_tag="QEL58_001889"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019658885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676367.1"
                     /translation="MKKLLTIAILAAAAVAVPLVVAQNAGQPAPQQGDQADKAQAEAD
                     AKAKRRAQATAEMKAQGQPAPQKEEEEEARKKK"
     gene            2703..4367
                     /locus_tag="QEL58_001890"
     CDS             2703..4367
                     /locus_tag="QEL58_001890"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003481821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CTP synthase"
                     /protein_id="HDS1676368.1"
                     /translation="MTPLIFVTGGVVSSLGKGIAAASLAAILEARGLKVTMMKLDPYI
                     NVDPGTMSPFQHGEVYVTDDGAETDLDLGHYERFVRTRLSRKNSVTTGRIYENVIRKE
                     RRGDYLGATVQVIPHITDEIRRCIDEATEGYDVALVEIGGTVGDIESLPFLEAIRQVR
                     TERGPEKALFMHLTLVPYIGAAGELKTKPTQHSVKELRSIGIQPDVLLCRSEQAVPDS
                     ERRKIAQFTNVSERAVISVPDVDVLYRIPSGLHAQGLDEIVVNQLKLADKAGPVDLSM
                     WEDAVDATLHPLDEVTIAVVGKYVDHQDAYKSVGEALKHGGLRQRTKVNLKWLEAQDL
                     EGTDMAALADVDGILVPGGFGDRGFEGKVLTSKFAREQQVPYFGICYGMQAAVVDYAR
                     NVVGLEGANSTENDRQSPNPVIGLITEWRTATGDVEKRDDKSDLGGTMRLGLQEQRLK
                     PGTLARELYGKDVVAERHRHRYEFNNRYRTQLEDAGLVIAGKSMDDTLVEVVELARDV
                     HPWFLACQAHPEFLSTPRDGHPLFIGFIRAARERKAGGKLLSEVRA"
     gene            4457..5287
                     /gene="kdsA"
                     /locus_tag="QEL58_001891"
     CDS             4457..5287
                     /gene="kdsA"
                     /locus_tag="QEL58_001891"
                     /EC_number="2.5.1.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005992423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-8-phosphooctulonate synthase"
                     /protein_id="HDS1676369.1"
                     /translation="MKLCGFEVGLDQPLFLIAGPCVIESMQLQLDTAGKLKEITDKLG
                     VNFIFKSSFDKANRTSGTAFRGPGMEEGLKVLAEVKKQIGVPVLTDVHEYTPMDEVAS
                     VVDVLQTPAFLVRQTDFIRKVCSAGKPVNIKKGQFLAPWDMKPVVEKAKATGNEQIMV
                     CERGASFGYNNLVSDMRSLAVMRDTDCPVVFDATHSVQLPGGQGTSSGGQREHVPVLA
                     RAAVAVGISGLFAETHPDPSKALSDGPNAWPLDQMEALLETLMELDAVTKKHGFSRFA
                     "
     gene            5284..5631
                     /locus_tag="QEL58_001892"
     CDS             5284..5631
                     /locus_tag="QEL58_001892"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010485993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676370.1"
                     /translation="MSRDPWVALDAQRHRRHWKQWPWGLIALGLAVLFTMGMFGLVLI
                     GAASVRPPGDGGSAINLRAYFMALLAAELLAAVGCAVSAVLAWRLNRGKVAAGLAVIL
                     LSLWLGALFYGLL"
     gene            5631..5960
                     /locus_tag="QEL58_001893"
     CDS             5631..5960
                     /locus_tag="QEL58_001893"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008267127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676371.1"
                     /translation="MNTSASARGWPWGLIALGLSVLAWASLLLGVMAFAASFGSPGDG
                     NHGMRAMQYWILAALVMLGLSFVGSAVAMVLAWRRQRGPVWATLAGVLLVMLLSLALI
                     VIGSSWG"
     gene            6057..7349
                     /gene="eno"
                     /locus_tag="QEL58_001894"
     CDS             6057..7349
                     /gene="eno"
                     /locus_tag="QEL58_001894"
                     /EC_number="4.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002808113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopyruvate hydratase"
                     /protein_id="HDS1676372.1"
                     /translation="MSTIRSIHAREILDSRGNPTLEAEVILEDGSFGRAAVPSGASTG
                     TKEAVELRDGDKTRYLGKGVRKAVDNVNGAIANAVKGFEATDQASLDRRLIDLDGTEN
                     KGRLGANALLGVSMAAAHAAAASNKQALWQYLAAKTGVTPSLPVPMMNIINGGAHADN
                     NVDFQEFMVLPVGFTSFSEALRAGTEIFHSLKSVLKGHGLSTAVGDEGGFAPDFRSNV
                     EALDTILEAIGKAGYTAGEDVLLGLDVASSEFFENGKYNLVGENKRLTSEQFVDFLAD
                     WAAQYPIITIEDGLAENDWAGWKLLTDRIGKKVQLVGDDLFVTNPKIFQEGIDSGTAN
                     AILIKVNQIGTLSETLEAIAMADRAGYAAVVSHRSGETEDTTIADISVATTATQIKTG
                     SLCRSDRVAKYNQLLRIEEALGAGARYAGRDAFVSLKR"
     gene            7354..7707
                     /gene="ftsB"
                     /locus_tag="QEL58_001895"
     CDS             7354..7707
                     /gene="ftsB"
                     /locus_tag="QEL58_001895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010485987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsB"
                     /protein_id="HDS1676373.1"
                     /translation="MRDWRWMLLVLALLLGWLQYRFWFGPGNSGEVMMLEAQVANQER
                     DNEGLQQRNDALAAEVKDLKEGQSAIEERARSELGMIKPGEKFYRVVEDAPVAPAQSA
                     AGANAQAAEHPADVP"
     gene            7704..8402
                     /locus_tag="QEL58_001896"
     CDS             7704..8402
                     /locus_tag="QEL58_001896"
                     /EC_number="2.7.7.60"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 4-phosphate
                     cytidylyltransferase"
                     /protein_id="HDS1676374.1"
                     /translation="MSAAIWVVVPAAGRGTRFGAPLPKQYLQAGGQILLAHTLDALLA
                     HPAVAGAMVVVGQDDADWPGWTEWAGKPVLTCIGGATRAASVLAGLQALPESVRADEF
                     VLVHDAARPNLSLADLGRLLEVGRADPVGAILAAPVRDTLKRAGDDGGIDGTEPRERL
                     WRALTPQLFRRHQLSRALSEAAAAGVEVTDEAMAMERQGQRPLLVEGSEDNFKVTTPA
                     DLDRFEFVLSRRAG"
     gene            8437..8934
                     /gene="ispF"
                     /locus_tag="QEL58_001897"
     CDS             8437..8934
                     /gene="ispF"
                     /locus_tag="QEL58_001897"
                     /EC_number="4.6.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014646702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 2,4-cyclodiphosphate
                     synthase"
                     /protein_id="HDS1676375.1"
                     /translation="MSTAPFPPVRIGQGYDVHAFGEGDHIMLGGVNVPHSCGVLAHSD
                     GDVILHALCDAMLGALALGDIGQHFPPSDDRWKGADSSEFVRHCDSLLRERGWRVGNT
                     DITVICERPKVGPHALAMRERIGGLLQLPLDAVSVKATTSEKLGFTGRGEGIAAQAVV
                     LLVAA"
     gene            8931..9962
                     /gene="truD"
                     /locus_tag="QEL58_001898"
     CDS             8931..9962
                     /gene="truD"
                     /locus_tag="QEL58_001898"
                     /EC_number="5.4.99.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019658879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(13) synthase TruD"
                     /protein_id="HDS1676376.1"
                     /translation="MIPVPLAFGAPLLTARIRTTPDDFQVDELPAFEATGEGEHLLLH
                     IRKRGANTVHVAKLLAAWAGLPEMAVSYAGMKDRHAVTTQRFSVHLPKRIAPDLAALA
                     SDEIEVLDATWHNRKLQRGALAGNRFKLVLRDVKGDRAAISERLQQIAERGLPNWFGE
                     QRFGRDGGNVPAALAMFGGRRMRKDQRSLLLSAARSALFNRVLAARVEQGSWDQPLDG
                     EVWMLDGSRSVFGPEPYTDVLAERLARFDIHPSAPLWGEGELRSTDAARELELAALDD
                     EESKALRAGLEDARLKQERRALRLRPALLQHVWLADDVLELSFALPPGCYATAVLHEL
                     GPVEDASQA"
     gene            complement(10033..10572)
                     /locus_tag="QEL58_001899"
     CDS             complement(10033..10572)
                     /locus_tag="QEL58_001899"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019237727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Smr/MutS family protein"
                     /protein_id="HDS1676377.1"
                     /translation="MSHPEDEDPAALFRAAIGEVTPLRKDAEPAPAAPRPKPRARMAE
                     RDEAEAAGEFARLLRDSSPLEAGDVASYRRDNLPPRLFQRLKRGQYSVQDELDLHGAT
                     AAQAESLLRQFLLEAHAHEYGCVRIIHGKGLQSDGGAPVLKNLVDRHLRLRNDVLAFH
                     SAPTGQGGTGAVLVLLARR"
     gene            10782..11561
                     /gene="surE"
                     /locus_tag="QEL58_001900"
     CDS             10782..11561
                     /gene="surE"
                     /locus_tag="QEL58_001900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019305385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'/3'-nucleotidase SurE"
                     /protein_id="HDS1676378.1"
                     /translation="MRILVSNDDGVDAAGIRMLASVLREAGHEVTVVAPDRDRSGASN
                     SLTLDLPIRLKRIDHYTVSVAGTPTDCVHLALTGLLEFEPDIVVSGINNAANLGDDVI
                     YSGTVSAAMEGRFLGLPAVAVSLVSRNHDPKHFETAARAAVEIVARLKADPLPADTIL
                     NVNVPDLPWNEVKGFEVTRLGNRHRAEGCIAQKDPRGNEVYWIGPAGREQDSGPGTDF
                     HAVRTGHISITPIQVDLTRYQALEKVASWVGGLSAALDRPA"
     gene            11558..12235
                     /locus_tag="QEL58_001901"
     CDS             11558..12235
                     /locus_tag="QEL58_001901"
                     /EC_number="2.1.1.77"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014503664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-L-isoaspartate(D-aspartate)
                     O-methyltransferase"
                     /protein_id="HDS1676379.1"
                     /translation="MSPRLRLQPEAVGIGMTSQRVRDRLVDRLREAGIVDEPTLNAIR
                     VVPRHLFIDEALASRAYEDTALPIGHGQTISQPWVVARMTEAVLQGAPKRVLEVGTGS
                     GYQAAILGALGLEVYTVERIGDLLRQARKRFRALGMNIRTKHDDGRVGWAEHGPFDAI
                     VVTAAAPALVDALVEQLAEGGRLVAPVGGPGAQSLVQLDRKADGSIEQRVLAPVTFVP
                     LLSGMLD"
     gene            12254..12868
                     /locus_tag="QEL58_001902"
     CDS             12254..12868
                     /locus_tag="QEL58_001902"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019183328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HDS1676380.1"
                     /translation="MKIFGPLYERAMKWAAHERAPTYLTVLSFFEAIIFPVMPEVMLA
                     PMCVAQPKRGWWFATLSLAGSMVGALIGYALGHFAFEAIKPLFEAMGMLPAIEQGITT
                     VQAKMAESPWAVFTFLVLGGFMPIPMKVFTWASGIVGVPMPQYLLSMLIGRGKRVYVL
                     AAVIRIGGARAEAALRRWIEPLGWIATALVVVLIAWLVWRSKFA"
     gene            12865..13650
                     /locus_tag="QEL58_001903"
     CDS             12865..13650
                     /locus_tag="QEL58_001903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005412928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HDS1676381.1"
                     /translation="MSPDRLSKGVRIGALALLVSTLAACGTATVVRPGGGGSSGGVTT
                     PKTSVPKPGQTVVVRKGDTIYALARIHDITPADLIAWNSLDNPSTIHPGQVIRLYPAG
                     ASGGRAPTTVVTAPRSGGSSAGSTAPTTAPAGPVKSNIAWRWPADGAIVGRYVAGDAT
                     KQGVDIAGTSGQPVKATANGVVVYSGAGLVGYGELIIIKHSDQWLSAYGHNRKRLVNE
                     GQSVKAGEQIAEMGRTGANRDMVHFEIRYNGKPVDPQQYLPAR"
     gene            13831..14319
                     /locus_tag="QEL58_001904"
     CDS             13831..14319
                     /locus_tag="QEL58_001904"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676382.1"
                     /translation="MFRFASALVLLIVAPLATAASDPRDVVTRLYDAIQAPESNETAI
                     PPLLGDALRSAIDAQRAYERACSALAARDEKPHMLDQSPYLLAPDRPETISVGMPASS
                     GDATWIRVDMAVGDYRWTDRVLLQRQDRDWKVMDIRWGQGGNLIGRLKEFSAFRCTAS
                     GS"
     gene            complement(14347..14721)
                     /locus_tag="QEL58_001905"
     CDS             complement(14347..14721)
                     /locus_tag="QEL58_001905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010365690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mth938-like domain-containing protein"
                     /protein_id="HDS1676383.1"
                     /translation="MQLNHEPPDYAYSLRAADGRSARVNDQALGSSFFLTPDQLVEHW
                     PVKQAAELQLADLEPILAMNPALIVLGTGDRQVFPPAVVMAACLSRGIGLEVMNNPAA
                     ARTFNILAAEGRKVAAAFILEG"
     gene            complement(14734..15039)
                     /gene="yhbY"
                     /locus_tag="QEL58_001906"
     CDS             complement(14734..15039)
                     /gene="yhbY"
                     /locus_tag="QEL58_001906"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019300317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome assembly RNA-binding protein YhbY"
                     /protein_id="HDS1676384.1"
                     /translation="MSIALTASQTRFLRGQAHDLKALLQTGGKGVTPAFIAELNEVLE
                     RHELVKVKVAAEDRDARDVMIGEIVAATESALVQRIGHVAVLYRPSKEQRQIVLPRG"
     gene            15105..15737
                     /gene="rlmE"
                     /locus_tag="QEL58_001907"
     CDS             15105..15737
                     /gene="rlmE"
                     /locus_tag="QEL58_001907"
                     /EC_number="2.1.1.166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004152870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (uridine(2552)-2'-O)-methyltransferase
                     RlmE"
                     /protein_id="HDS1676385.1"
                     /translation="MATRSKSSQRWLKEHFSDPFVKKAQAEGMRSRAAYKLEELLERD
                     RLLKPHMVVVDLGAAPGGWSQQVRRQIGDTGRVLALDILDMPPLAGVEFLHGDFREEA
                     VLSQFEAMLGDQPVDLVLSDMAPNKSGVGAVDQPRMMHLAELALDFADNHLKTGGAFL
                     IKLFQGEGFDDYVREMRRRYDKVSIRKPEASRKRSPEVYALGQGKRAHMK"
     gene            15807..17741
                     /gene="ftsH"
                     /locus_tag="QEL58_001908"
     CDS             15807..17741
                     /gene="ftsH"
                     /locus_tag="QEL58_001908"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014036751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent zinc metalloprotease FtsH"
                     /protein_id="HDS1676386.1"
                     /translation="MNDLTKNLLLWVVVAVVLMVVFQSFSPKTSGAGAQGASYSQFLD
                     QVDSGNVQKVAFGGDMRGGTSQLTYTTRGGQSSTITAPFDRDLINVLRTKNVEIVQEE
                     PSSGISLGAILMNFLPVILIIGFWLFIMRQMQGGGGGAKGAMSFGKSRAKLQGEDQIK
                     VTFADVAGCDEAKEEVGELVDFLRDPSKFTKLGGKIPRGVLMVGPPGTGKTLLAKAIA
                     GEAKVPFFSISGSDFVEMFVGVGASRVRDMFEQAKKHAPCIIFIDEIDAVGRHRGAGL
                     GGGHDEREQTLNQLLVEMDGFEGGEGVIVIAATNRPDVLDPALLRPGRFDRQVVVGLP
                     DVKGREHILKVHMRKLPLADDVEPMVIARGTPGFSGADLANLCNEAALFAARGNEKEV
                     RMDHFDRARDKILMGAERRSMAMSEEEKTLTAYHEAGHAIVGRLVPEHDPVYKVTIIP
                     RGRALGVTMYLPEGDKYSMNRVAIKSQLCSLYGGRVAEELIFGADKVTTGASNDIERA
                     TKMARNMVTKWGLSDQLGPIAYGEEDDEVFLGRSVTQHKSVSNDTARRIDEEVRNILD
                     EAYARTTELMTANLDKLHAMSQLLLQYETIDAPQIDAIMEGRDPPPPAGWNKSNKDGG
                     NDKGGDARPLPPIAGPAESH"
     gene            17844..18029
                     /locus_tag="QEL58_001909"
     CDS             17844..18029
                     /locus_tag="QEL58_001909"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010485963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676387.1"
                     /translation="MSAPKPEPISHTVEMVIATVVGVGVGLGADNLLLGCVVGIAVGI
                     VLSIAKTLYVDRKRRRR"
BASE COUNT         3034 a         5907 c         6138 g         3033 t
ORIGIN      
        1 gatggcgtca gacttccagc gaagccaggt cgcccttggt ttccagccag cccttgcggt
       61 cggaggcgcg cttcttggcc agcagcatgt ccatcagcga actcgtctgc tcgcgatcgt
      121 ccacggtcag ctgcaccagg cggcgcgtat ccgggtggat ggtggattca cgcagctgcg
      181 gcggattcat ctcgcccagg cccttgaagc gggtcacgtt gatggcaccc ttgatcttct
      241 cgcgttcgat cttgtccagc atcgagcgct tttcttcctc gtccagggcg tagaacacct
      301 gcttgcccac gtcgatgcgg aacagcggcg gcatcgccac gaacacgtgg cctgcatcga
      361 ccagcgccgg gaagtgcttc aggaacagcg cggtgagcag ggtggcgatg tgcaggccgt
      421 cggagtccgc gtcggccagg atgatgacct tgccgtagcg cagcccgctg atgtcatcct
      481 tgcccgggtc gcaaccgatg gcgatggcca ggttgtgcac ttcttccgag gccagcacgc
      541 tgttggagga aacttcccag gtattcagga tcttgccgcg caacggcatg atcgcctgga
      601 agtccttgtc gcgggcctgc ttcgcgctac cgcctgccga gtcaccttcc accaggaaca
      661 gctcggtgcg cgacaggtcc tggctgatgc agtcggccag cttgccgggc agcgccgggc
      721 cctgggtgac cttcttgcgg acgaccagct tctcggtctt gaggcgcgcg ctggcgcgtt
      781 cgatggcgat ctgcgcgatc ttctcgccca gctccacgtt ctggttcagc agcaggctga
      841 aggcatcgtg ggccgcgccc tcgacgaagc cggcggcctg gcgcgaagac aggcgttcct
      901 tggtctggcc gctgaactgc gggtcggtca tcttcagcga cagcacgaac gacacgcggt
      961 cccacacgtc ttccggggcc agcttgacgc cgcgcggcag caggttgcgg aagtcgcaga
     1021 actcgcgcag cgcctcggtc aggccggtac gcaggccgtt gacgtgggtg ccgtgctgcg
     1081 cggtgggaat caggttgacg tagctttcct gtaccagttc accttccggc agccaggcca
     1141 cggcccagtc caccacctcg gtgtccttct tcaggttgcc gacgaacagg tcggccggca
     1201 gtgattcgcg ctcgcccagt tccagcttca ggtaatcgcg caggccgtcc tcgtagtacc
     1261 aggtatcgac ttcaccggtg gcttcgtcgg tcagcttgac ggtcaggccc gggcacagca
     1321 ccgccttggc gcgcagcagg tgcttcagtg cgcgcacggc gaacttgggc gtatcgaagt
     1381 acttcgggtc gggccagaag cgcacgcggg taccggtgtt cttcttgccg acgctgccga
     1441 ccacttccag cggggtggcg cggtcgccat tgcggaaggt gatgcggtgt tcggcgcctt
     1501 cgcgcttgat gtgcacttcc accagggtcg acagcgcgtt gaccacgctg acgccgacgc
     1561 cgtgcaggcc gccggagaag gtgtagttgt tgttgctgaa cttgccgccc gcatgcaggc
     1621 gggtcaggat cagttcgacg cccggaatct tctcttccgg gtggatgtcc accggcatgc
     1681 cgcggccgtc atcgctgacc tccacgctgc cgtccttgta cagggtgatc tcgatcgagc
     1741 gggcgtggcc ggccagggcc tcgtccaccg agttgtcgat cacttcctgc gccaggtggt
     1801 tcgggcgcgc ggtgtcggta tacatgccgg gacggcgctt gaccgggtca aggccggaca
     1861 ggacttcaat atcggcggcg ttatagcggg cgttcatcta tcttcaaagc gcggagcgac
     1921 gcgcaagtgt gcggtctgga cggcgatttt gcacgcctgc ggttcagcct cggcgccggg
     1981 gagggggtaa aatggcagcc gctggaatct gaacgccggc gaccccggtt gggtcgaaac
     2041 gtccaagcca taccgcgagg aggacctcat gaagaagttg ctgaccattg cgatcctggc
     2101 cgctgccgcc gttgcagtgc cgctggtggt ggcgcagaac gccggccagc cggcgccgca
     2161 gcagggtgac caggccgaca aggcgcaggc cgaggcggat gccaaggcca agcgtcgcgc
     2221 gcaggccact gccgaaatga aggcgcaggg ccagccggcc ccgcagaagg aagaggaaga
     2281 agaggcgagg aagaagaagt aatccttcca ccctccgaag cccttgccgc aagggattcg
     2341 ccccccgacg ccccgctctg cggggcgttt cttttgggtg atggccgcaa ctgcctcttg
     2401 ggttggcggc catcaatctg taaactacgg ctttccggga gtaagtgcgt gtccaccctt
     2461 tgcgaatggg ctggcgcgac catgcgtggt cgccagcaat gcgggtcgca ggtgacggtc
     2521 gatagggccg gcacggccgc cccgacctcg cacggtggtc cccgtccggc gtctgccgcc
     2581 gcacggttcc gcacctccct cgctgcccca gcgaaccgga aaaccccctt caggctccat
     2641 gcccgccccc agggcgcgcg tggtgctgcc gttttccatt tccagacagg atgcttgcag
     2701 ccatgactcc cttgattttc gtaaccggcg gcgtggtgtc ctcgctcggc aaaggcattg
     2761 ccgcggcgtc actggccgcc attctcgaag cccgtggcct gaaggtcacg atgatgaagc
     2821 tcgacccgta catcaacgtg gacccgggca ccatgagccc gttccagcac ggtgaggtgt
     2881 acgtcaccga cgacggcgcc gagaccgacc tcgacctggg ccactacgaa cgcttcgtgc
     2941 gcacccgcct gagccgcaag aactcggtca ccaccggccg catctacgag aacgtgatcc
     3001 gcaaggagcg ccgcggcgac tacctgggcg ccaccgtgca ggtcattccg cacatcaccg
     3061 acgagatccg ccgctgcatc gacgaagcca ccgaaggcta tgacgtggcg ctggtcgaga
     3121 tcggcggcac cgtgggcgac atcgaatcgc tgccgttcct ggaggcgatc cgccaggtgc
     3181 gcaccgagcg cggcccggag aaggcgctgt tcatgcacct caccctggtg ccgtacatcg
     3241 gcgccgccgg cgagctgaag accaagccga cccagcactc ggtgaaggaa ctgcgctcga
     3301 tcggcatcca gccggacgtg ctgctgtgcc gttccgagca ggctgtgccg gattcggagc
     3361 gccgcaagat cgcgcagttc accaacgtct ccgaacgcgc cgtcatcagc gtgcctgacg
     3421 tggacgtgct gtaccgcatt ccgtccggcc tgcacgcgca gggcctggac gagatcgtgg
     3481 tcaaccagct gaaattggcc gacaaggccg gtccggtcga cctgtcgatg tgggaggatg
     3541 cggtcgacgc gaccctgcac ccgctggacg aagtcaccat tgctgtggtc ggcaagtacg
     3601 tcgaccacca ggatgcctac aagtcggtgg gcgaggcgct caagcacggt ggcctgcgcc
     3661 agcgcaccaa ggtcaacctg aagtggctgg aagcccagga cctggaaggc accgacatgg
     3721 ccgcgctggc cgacgtcgac ggcatcctgg tgccgggtgg cttcggcgac cgtggttttg
     3781 aaggcaaggt gctgacctcg aagttcgcgc gcgagcaaca ggtgccgtac tttggcatct
     3841 gctacggcat gcaggcggcg gtggttgatt acgcccgcaa cgtggtcggc ctggaaggcg
     3901 ccaacagcac cgagaacgat cgccagtcgc cgaacccggt gatcggcctg atcaccgaat
     3961 ggcgcaccgc taccggcgat gtcgagaagc gtgacgacaa gagcgacctg ggcggcacca
     4021 tgcgcctggg cctgcaggaa cagcgcctga agccgggcac gctggcccgt gagctgtacg
     4081 gcaaggatgt ggtcgccgag cgccatcgcc accgttacga gttcaacaac cgctaccgca
     4141 cccagctgga agacgcgggc ctggtgatcg ccggcaagtc gatggacgac accctggtgg
     4201 aagtggtcga gctggcgcgc gatgtgcacc cgtggttcct ggcctgccag gcgcacccgg
     4261 aattcctgtc cacgccgcgt gacggccacc cgctgttcat cggtttcatc cgtgccgcgc
     4321 gcgagcgcaa ggcgggcgga aagctgcttt ccgaagtgcg cgcctgactt gtgaatgggg
     4381 gcttcggccc ccatcctgca tgcttcaacc cccagcgcac cggcatgacc ggtgctgcgg
     4441 acaacaagga aacgccatga aactgtgtgg attcgaggtc gggctggacc agcccctgtt
     4501 cctgatcgcg ggcccctgcg tgatcgagtc gatgcagctg cagctcgata ccgccggcaa
     4561 gctgaaggag atcaccgaca agctcggcgt caacttcatc ttcaagtcca gcttcgacaa
     4621 ggccaaccgc acttcgggca ctgccttccg cggcccgggc atggaagagg gcctgaaggt
     4681 gctggccgag gtcaagaagc agatcggcgt gccggtgttg accgacgtcc acgaatacac
     4741 cccgatggac gaagtggcct cggtggtgga cgtgctgcag accccggcgt tcctggtccg
     4801 ccagaccgac ttcatccgca aggtgtgctc ggctggcaag ccggtcaaca tcaagaaggg
     4861 ccagttcctg gcgccgtggg acatgaagcc ggtcgtggaa aaggccaaag ccaccggcaa
     4921 cgagcagatc atggtctgcg agcgcggcgc cagcttcggc tacaacaacc tggtcagcga
     4981 catgcgttcg ctggcggtga tgcgcgacac cgattgcccg gtggtgttcg atgccaccca
     5041 ttcggtgcag ctgccaggcg gccagggcac cagttcgggc ggccagcgcg agcacgtgcc
     5101 ggtgctggcc cgtgccgcag tggcggtggg tatctccggc ctgttcgccg agacccatcc
     5161 ggatccgtcc aaggccctgt ccgatggccc caatgcgtgg ccgctggatc agatggaagc
     5221 cctgctcgag accctgatgg agctcgatgc ggtgaccaag aagcacggct tctcgcgctt
     5281 cgcgtgagtc gcgacccgtg ggtggcgctg gacgcccagc gtcaccgtcg gcactggaag
     5341 caatggccgt ggggcttgat cgcactcggc ctggccgtgc tgttcacgat gggcatgttc
     5401 ggcctggtgc tgatcggcgc cgcgtcggtg cggccgcccg gtgatggcgg cagcgcaatc
     5461 aatctgcgcg catatttcat ggcattgctg gcggcagagc tgctggctgc cgtgggctgc
     5521 gccgtgtccg ccgtactggc ctggcggctg aatcgcggca aggtggcggc gggcctggcg
     5581 gtcatcctgc tgtcgctgtg gctgggcgcc ttgttctacg gtcttctttg atgaatacga
     5641 gcgcgtcggc ccgcggttgg ccctggggcc tgatcgcgct ggggttgtcc gtgctcgcct
     5701 gggcgtccct gctgctgggt gtaatggcct ttgcggccag tttcggctcg ccgggtgacg
     5761 gcaaccacgg catgcgggcc atgcagtact ggattctggc cgctctggtc atgctcggcc
     5821 tgtcgttcgt cggcagcgcg gtggcgatgg tgctggcctg gcgacggcag cgaggaccgg
     5881 tctgggcgac ccttgccggc gtgttgctgg tgatgctgct gtcgctggcc ctgatcgtga
     5941 tcgggtccag ctggggttga aggcgatcaa gccatttggc aagtggcggg cagccgggga
     6001 taatcacgcg gcattcgttt tgtcgccccc tctccataca ggtaaccggc ccgaccatga
     6061 gtacgatccg cagcatccac gcccgtgaaa tcctcgacag ccgtggcaat cccacgctgg
     6121 aagccgaagt catcctggag gacggttcgt tcggtcgtgc cgcggttccc tccggcgcct
     6181 cgaccggcac caaggaagcg gtcgagctgc gtgacggcga caagacccgt tacctgggca
     6241 agggcgtgcg caaggccgtc gacaacgtca acggcgccat tgccaacgcg gtgaagggtt
     6301 ttgaagccac cgaccaggcc agcctcgacc gtcgcctgat cgacctcgac ggcaccgaga
     6361 acaagggtcg cctgggtgcg aacgcgctgc tgggtgtttc gatggctgcc gcgcacgctg
     6421 ccgccgcttc gaacaagcag gcgctgtggc agtacctcgc cgccaagacc ggcgtgaccc
     6481 cgtcgctgcc ggtgccgatg atgaacatca tcaacggcgg cgcgcatgcc gacaacaacg
     6541 tcgacttcca ggaattcatg gtgctgccgg tgggcttcac ctcgttctcc gaagcgctgc
     6601 gtgccggcac cgagatcttc cattcgctga agtcggtgct gaagggccac ggcctgagca
     6661 cggcggtcgg cgatgaaggc ggcttcgcac cggacttccg cagcaacgtc gaagcgctcg
     6721 acaccatcct cgaagcgatc ggcaaggccg gctacaccgc cggtgaagac gtgctgctgg
     6781 gcctggacgt ggcctccagc gagttcttcg agaacggcaa gtacaacctg gttggcgaga
     6841 acaagcgcct gacctccgag cagttcgtcg acttcctcgc cgactgggcc gcgcagtacc
     6901 cgatcatcac catcgaagat ggcctggccg agaacgactg ggccggttgg aagctgctga
     6961 ccgatcgcat cggcaagaag gtgcagctgg tcggtgacga cctgttcgtg accaacccga
     7021 agattttcca ggaaggcatc gactcaggca ccgccaacgc gatcctgatc aaggtcaacc
     7081 agatcggcac cctcagcgaa accctggaag cgatcgccat ggccgaccgt gccggctatg
     7141 ccgccgtggt ctcgcaccgt tctggcgaaa ccgaagacac caccatcgcc gacatctcgg
     7201 ttgccaccac cgcaacccag atcaagaccg gctcgctgtg ccgcagcgat cgcgtggcca
     7261 agtacaacca gctgctgcgc atcgaggaag cccttggtgc cggcgcgcgt tacgccggtc
     7321 gtgacgcgtt cgtttcgctg aagcgctgag ccgatgcgcg actggcgctg gatgctgctg
     7381 gtgctggccc tgctgctggg ctggctgcag taccgcttct ggttcggtcc gggcaattcg
     7441 ggtgaagtga tgatgctcga agcgcaggtc gccaaccagg agcgggacaa tgagggcctg
     7501 cagcagcgca acgatgcgct tgctgccgaa gtgaaggacc tcaaggaagg ccagtccgcc
     7561 atcgaggaac gcgcgcgtag cgaactgggc atgatcaagc ccggcgagaa gttctaccgc
     7621 gtggtcgaag atgcgccggt tgcaccggcg cagtctgcgg caggtgccaa tgcccaggcc
     7681 gccgaacatc cggcggacgt gccgtgagcg cggcgatctg ggtggtggtt ccggccgccg
     7741 gccgaggcac ccgctttggc gcgccactac ccaagcagta cctgcaggcg ggcgggcaga
     7801 tcctgctcgc ccacaccctg gacgcgctgc tggcgcatcc ggccgtggcc ggggcaatgg
     7861 tggtggtcgg gcaggacgac gccgactggc cgggctggac cgagtgggcg ggcaagccgg
     7921 tgctgacctg catcggcggc gcgacccgtg ccgcttcggt gctggccggg ttgcaggcgc
     7981 tgccggagtc ggtgcgcgcc gacgagttcg tgctggtcca cgacgcggcg cgtccgaacc
     8041 tgtcgctggc cgatctcggt cgcctgcttg aagtcggtcg tgccgatccg gtcggcgcga
     8101 tcctggccgc gccggtgcgc gacacgctca agcgcgcggg cgacgatggt ggcatcgatg
     8161 gcaccgagcc gcgcgaacgg ctgtggcgtg cgttgacccc gcagctgttc cgtcgccacc
     8221 agctcagccg tgcgctgtcc gaggctgcgg ccgccggtgt cgaggtcacc gacgaggcca
     8281 tggccatgga gcgccagggc cagcgcccgc tgcttgtgga aggcagcgag gacaacttca
     8341 aggtcaccac cccggccgat ctggaccggt tcgaattcgt actttcccgc cgcgccggct
     8401 gattgcccgc gcggccctgc tgcaagggtt gcatccatga gcaccgcacc gttcccgccc
     8461 gtccgcatcg gccagggcta cgacgtccat gccttcggtg aaggcgatca catcatgctt
     8521 ggcggcgtga acgtaccgca cagctgtggc gtgctcgcgc acagcgacgg cgacgtgatc
     8581 ctgcatgccc tgtgcgatgc catgctcggc gcgctggcgc tgggtgacat cggccagcac
     8641 ttccccccga gtgatgatcg ctggaagggc gccgacagca gtgagttcgt gcgccactgc
     8701 gacagcctgc tgcgcgagcg cggctggcgc gtcggcaaca ccgacatcac cgtgatctgt
     8761 gagcgaccca aggttggacc gcatgcgctg gcgatgcgcg agcgcatcgg cgggctgctg
     8821 cagctgccgc tggacgcggt cagcgtcaag gccaccacct cggaaaagct cggcttcacc
     8881 ggccgcggtg agggcatcgc tgctcaggcg gtggtgctgc tggtggcggc atgattccgg
     8941 taccgctggc gttcggtgcg ccgctgctca ccgcacgcat ccgcaccacg ccggacgatt
     9001 tccaggtcga cgaactgccg gccttcgagg ccacgggtga aggcgagcac ctgctgctgc
     9061 acatccgcaa gcgcggtgcc aataccgtgc acgtggccaa gctgctggcg gcgtgggctg
     9121 gcctgccgga aatggcggtc agctatgccg gcatgaagga tcgccacgcc gtcaccaccc
     9181 agcgcttcag cgtgcacctg cccaaacgca tcgcgccgga tctcgccgcg ctggccagtg
     9241 atgagattga agtgctcgac gccacctggc acaaccgcaa gctgcagcgc ggcgcactgg
     9301 ccggcaaccg cttcaagctg gtgctgcgcg acgtgaaggg ggatcgtgca gcgatcagcg
     9361 aacgcctgca gcagattgcc gagcgcggcc tgccgaactg gttcggtgag cagcgcttcg
     9421 gccgcgacgg cggcaacgtg cctgcggccc tggcgatgtt cggtggccgt cgcatgcgca
     9481 aggaccagcg ttcgctgctg ctgtcggctg cccgttccgc actgttcaac cgcgtgctgg
     9541 ccgcgcgcgt ggagcagggc agctgggacc agccgctgga cggcgaagtg tggatgctgg
     9601 acggcagccg cagcgtgttc ggccccgagc cctataccga tgtactggcc gaacgcctgg
     9661 cgcgcttcga catccatccc agcgcaccgc tgtggggcga gggcgagctg cgcagcaccg
     9721 acgctgcacg tgagctcgaa ttggcagcgc tggacgacga ggaatcgaaa gcgctgcggg
     9781 ccggcctgga agacgcacgc ctgaaacagg agcgccgcgc gctgcgcctg cgtccggcgt
     9841 tgctgcagca cgtgtggctg gccgatgacg tgctggaact gtcgttcgca ctgccgccag
     9901 gctgctacgc caccgcagtg ctgcacgaac tcggcccggt cgaagacgcc tcgcaggcct
     9961 gaccgaaaaa aggggacgga ggggattaag tcgtttgtgc ctcaaacgac ttaatcccct
    10021 ccgtcccatt tttcatctgc gcgccagcag caccagcacc gcgccggtac cgccttgccc
    10081 ggtcggtgcc gaatggaacg ccagcacatc gttgcgcagg cgcagatggc gatcgaccag
    10141 gttcttcagc accggcgcgc cgccatcgga ctgcaggccc ttgccgtgga tgatgcgtac
    10201 gcaaccatat tcgtgagcat gcgcctccag caggaactgg cgcagcagcg actcggcctg
    10261 cgcggcggtg gcgccatgca ggtccagttc gtcctgcacc gaatactggc cacgcttcag
    10321 ccgctggaac aagcgcggcg gcaggttgtc gcgccgatag ctggccacat cgccggcttc
    10381 cagcggcgag ctgtcgcgca gcagccgggc gaattcgcca gccgcttcgg cctcgtcacg
    10441 ttcggccatg cgtgcgcgcg gcttgggccg cggcgcggcc ggggccggtt cggcatcctt
    10501 gcgcagcggc gtcacttcgc cgatggccgc acggaacagg gcggccggat cttcgtcttc
    10561 agggtgcgac atgcgcacag ggtaaaccgc cggcgcaggt ctgcctatga cggttcgatg
    10621 tcggccctga ctgccggcag ggtaggaccc gcggctcgca tgcggcacaa tagacgatgc
    10681 ccttgcaggg tcgacggctt ccgcagggga gtacggcggt cccgcccaca ctgcacggtg
    10741 acggaatcga attcttggaa aatcaagcgg ttaaatcgaa gatgcgaatc ctggtcagta
    10801 acgacgacgg cgtcgacgcc gcaggcatcc ggatgctggc ctcggtgctg cgcgaggcag
    10861 gccacgaagt cacggtggtc gcacccgacc gcgatcgctc cggcgccagc aactcgctca
    10921 ccctggacct gccgatccgc ctcaagcgca tcgaccatta caccgtttcg gtggccggta
    10981 cgccgaccga ctgcgtgcac ctggcgctga ccggcctgct ggagttcgag cccgacattg
    11041 tcgtgtccgg catcaacaac gccgccaacc tgggcgatga cgtgatctat tccggcaccg
    11101 tctcggcggc aatggaaggt cgcttcctcg gcctgccggc agtggcggtc tcgctggtca
    11161 gccgcaatca cgatccgaag cacttcgaga ccgccgcgcg tgccgcggtg gaaatcgtcg
    11221 cccggctcaa ggccgatccg ctgccggccg acaccatcct caacgtcaat gtgcctgacc
    11281 tgccgtggaa cgaggtcaag ggctttgaag tcacccggct cggcaaccgc catcgcgccg
    11341 aaggctgcat cgcgcagaag gacccgcgcg gcaacgaggt gtactggatc ggcccggctg
    11401 gtcgcgagca ggactccggc cccggcaccg acttccatgc ggtgcgcacc gggcatatct
    11461 cgatcacccc gatccaggtc gacctgaccc gctaccaggc gctggagaag gtggccagct
    11521 gggtcggcgg cctcagtgcc gcgctggacc ggccggcatg agtccacgcc tgcgattgca
    11581 gccggaagct gtcggcatcg gcatgacctc gcagcgcgtg cgtgatcgcc tggtcgatcg
    11641 cctgcgcgag gccggcatcg tcgacgagcc caccttgaat gcgatccggg tggtgccgcg
    11701 ccatctgttc atcgacgagg cgctggcctc gcgcgcctac gaagacaccg cgctgccgat
    11761 cggccacggg cagaccattt cgcagccgtg ggtcgtggcg cggatgaccg aggcggtgct
    11821 gcagggtgca ccgaagcggg tgctggaggt cggtacgggt tccggctacc aggcggccat
    11881 cctcggcgcg ctgggcctgg aggtctacac cgtggagcgc atcggagacc tgctgcggca
    11941 ggcgcgcaag cgcttccggg cgctgggcat gaacatccgc accaagcatg acgacggccg
    12001 cgtcggctgg gccgagcacg gcccgttcga tgccatcgtg gtcactgctg cggcgccggc
    12061 actggttgac gcactggtcg aacagctggc cgagggcggc cggttggtgg caccggtcgg
    12121 cggccccgga gcgcagtcgc tggtacagct ggaccgcaag gctgacggca gcatcgaaca
    12181 acgcgtgctg gcgccggtca ccttcgtgcc gctgctgtct ggcatgctcg actaatccac
    12241 ggagcagggt tgcatgaaga ttttcgggcc gctgtacgag cgggcgatga agtgggcggc
    12301 gcacgaacgc gcgccgacct acctgacggt gttgagtttc ttcgaggcga tcatcttccc
    12361 ggtgatgccg gaggtgatgc tggcgccgat gtgcgtggcc cagcccaaac gcggctggtg
    12421 gtttgccacc ctcagcctgg ccggctcgat ggtcggcgca ctgatcggct atgcactggg
    12481 ccatttcgcc ttcgaggcga tcaagccgct gttcgaggcg atgggcatgc tgccagcgat
    12541 cgagcagggc atcaccaccg tgcaggcaaa gatggccgaa tcgccgtggg cggtgttcac
    12601 cttcctggtg ctgggcggct tcatgccgat cccgatgaag gtcttcacgt gggcatcggg
    12661 tatcgtcggc gtaccgatgc cgcagtacct gctgagcatg ctgatcggtc gtggcaagcg
    12721 cgtgtacgtg ctggccgcgg tcatccggat cggtggcgcg cgtgccgaag cggcgctgcg
    12781 ccgctggatt gaaccgctgg gctggatcgc caccgcgttg gtggtggtgc tgatcgcctg
    12841 gcttgtatgg aggtcgaagt tcgcatgagt cctgatcgtc tgagcaaggg agtgcgcata
    12901 ggcgcgctgg cgttgctggt ttccaccctg gccgcctgtg gcaccgcgac tgtggtccgc
    12961 cccggtggcg gcggcagcag cgggggcgtg accacgccaa agacctcggt gcccaagccg
    13021 gggcagaccg tggtcgtgcg caagggtgac accatctatg cgctggcccg catccacgac
    13081 atcactccgg ccgacctgat cgcctggaac agcctggaca acccctcgac gatccatccg
    13141 ggccaggtga tccggctgta tccggctggt gccagtggcg gccgcgcgcc gaccacggtg
    13201 gtcaccgccc cgcgttccgg tggcagcagt gccggcagca ccgcgccgac caccgcaccg
    13261 gcgggtccgg tgaagagcaa catcgcctgg cgctggccgg ccgatggcgc gatcgttggc
    13321 cgttacgtgg ccggcgacgc gaccaagcag ggcgtcgaca tcgccggcac cagcggccaa
    13381 ccggtgaagg ccacggccaa tggcgtggtg gtgtattccg gcgccggcct ggtcggctac
    13441 ggcgagctga tcatcatcaa gcacagcgac cagtggctgt cggcctatgg ccacaaccgc
    13501 aagcgactgg tgaatgaagg ccagagcgtg aaggcggggg agcagatcgc cgagatgggc
    13561 cgcaccggcg cgaaccgcga catggtccac ttcgagattc gctacaacgg caagccggtc
    13621 gacccgcagc agtacctgcc ggcacgctga tcgccgttgg atcgggtagc gccgggcaat
    13681 gcccggcctt cctgacttgt agcgtcgagc catgctcgac tcgggtagcg tagagatgcg
    13741 gtcacttgcg atcttgtgtg ttgcaggctc gccttcacga cggatggaat acccggcatt
    13801 cttgagtggt cccattcgcc ccggtgcccc atgttccgct ttgcttccgc tctcgtgctg
    13861 ctcatcgtcg cgccattggc gaccgccgcc agcgatccgc gtgacgtggt tacccgtctc
    13921 tacgacgcca tccaggcacc ggagtcgaac gaaacggcca ttccgccgct gctgggcgat
    13981 gccctgcgtt cagcgattga tgctcagcgc gcttacgagc gggcctgcag cgcgctggcc
    14041 gcgcgcgacg aaaagccgca catgctcgac cagagcccgt atctgctggc cccggatcga
    14101 ccggaaacga tatccgtagg aatgcccgca tcgagcggtg acgccacctg gatccgcgtt
    14161 gacatggccg taggcgacta tcgctggacc gaccgggtcc tgctgcagcg gcaggaccgc
    14221 gactggaagg tcatggatat ccgctggggg cagggtggca acctgattgg ccggctcaag
    14281 gagttctcgg ccttccgctg cacagcttcg ggcagctagc gccggggcgc acccggcgac
    14341 tcgaactcag ccttccagga tgaaggcggc ggcgaccttg cggccttcgg cggccaggat
    14401 gttgaaggtg cgtgcggcgg ccggattgtt catcacttcc aggccaatgc cgcgcgacag
    14461 gcaggcggcc atcaccacgg ccggcgggaa cacctggcgg tcgccggtgc caagcacgat
    14521 cagcgccggg ttcattgcca ggattggctc caggtcggcc agctgcagtt cggcggcctg
    14581 cttcaccggc cagtgctcga ccagctggtc cggggtcagg aagaagctgc tgcccagcgc
    14641 ctggtcgttg acccgcgccg agcggccgtc ggcggcgcgc aggctgtagg cgtaatcagg
    14701 cggttcgtgg ttcagctgca tggcagtggg cgatcagccg cgcggcagca cgatctggcg
    14761 ctgttccttg ctcgggcggt acagcacggc aacgtggccg atgcgctgca ccagcgcgct
    14821 ttcggtggct gcgacaatct cgccgatcat cacgtcacgg gcgtcgcggt cctcggcagc
    14881 gaccttcacc ttgaccagct catggcgctc cagcacttcg ttcagctcag cgatgaaggc
    14941 cggggtcacg cccttgccgc cggtctgcag cagggccttc aggtcgtggg cttggccgcg
    15001 caggaaacgg gtctgggagg cggtcagggc gatggacatg caggaaaaga cggttgaatg
    15061 gggcgatcag ggtatcatga ggaccccatc agcccctatt ttcaatggca acccgcagca
    15121 aaagcagcca gcgctggctc aaggaacact tctccgaccc cttcgtgaag aaggcgcagg
    15181 ccgaaggcat gcgctcgcgc gccgcctaca agctcgaaga actgctcgaa cgtgaccggt
    15241 tgctgaagcc gcacatggtc gtggtcgacc tgggggcggc cccggggggc tggtctcagc
    15301 aggtcaggag acagatcggc gacaccggcc gcgtgctggc gctggacatc ctggacatgc
    15361 cgccgctggc cggcgtggag ttccttcatg gtgacttcag ggaagaagcc gtcctatctc
    15421 agtttgaagc catgctcggg gatcagccgg tagaccttgt gctgtcggac atggccccca
    15481 ataagagtgg tgtgggcgcg gtcgaccagc cgcggatgat gcacctggcg gagctggccc
    15541 tggattttgc cgacaaccac ctgaagaccg gtggggcatt cctgatcaag ctgttccagg
    15601 gcgaaggctt tgacgactat gtgcgcgaaa tgcgccgcag gtacgacaag gtctccatcc
    15661 gcaagccgga ggcctcgcgc aagcgctctc ccgaggtgta tgccttgggt cagggaaaac
    15721 gcgcccacat gaagtaagct cgcaacgtac gcaagttcga ccccaacgca acgccagcac
    15781 taagaggaac accggagcca atgaggatga acgacttgac caagaacctc ctgctatggg
    15841 tggtcgtcgc cgtcgtgctg atggtggtct tccagagctt ctcgcccaag acctccgggg
    15901 ccggggcgca gggtgcgtcg tactcgcagt tcctggacca ggtggacagc ggcaacgtgc
    15961 agaaggtcgc cttcggcggc gacatgcgcg gcggcaccag ccagctgacc tacaccaccc
    16021 gcggtgggca gtcgtccacc atcaccgcgc cgttcgatcg tgacctgatc aacgtgctgc
    16081 gcaccaagaa cgtggagatc gtgcaggaag agccgtccag cggcatctcc ctgggcgcga
    16141 tcctgatgaa cttcctgccg gtcatcctga tcatcggctt ctggttgttc atcatgcgcc
    16201 agatgcaggg cggtggcggc ggtgccaagg gcgcgatgtc cttcggcaag tcgcgcgcca
    16261 agctgcaggg cgaagaccag atcaaggtca ccttcgccga cgtcgctggc tgcgacgagg
    16321 ccaaggaaga agtgggcgag ctggtcgact tcctgcgcga cccgtccaag ttcaccaagc
    16381 tgggcggcaa gattccgcgc ggcgtgctga tggtgggccc gccgggtacc ggcaagacgc
    16441 tgctggccaa ggcgatcgcc ggcgaagcca aggtgccgtt cttctcgatc tccggttcgg
    16501 acttcgtgga aatgttcgtc ggcgtcggcg ccagccgcgt gcgcgacatg ttcgagcagg
    16561 ccaagaagca cgccccatgc atcatcttca tcgacgaaat cgacgccgtc ggtcgccacc
    16621 gtggtgccgg cctgggcggc ggtcatgacg agcgcgagca gaccctgaac cagctgctgg
    16681 tcgagatgga cggcttcgag ggtggcgagg gtgtgatcgt gatcgccgcg accaaccgcc
    16741 cggacgtgct ggacccggcg ttgctgcgtc cgggccgttt cgaccgccag gtcgtggtgg
    16801 gcctgccgga cgtgaagggc cgcgagcaca tcctgaaggt tcacatgcgc aagctgccgc
    16861 tggccgacga cgtcgagccg atggtgatcg cgcgcggtac cccgggcttc tccggtgccg
    16921 atctggccaa cctctgcaac gaggcggcgc tgttcgccgc gcgtggcaac gagaaggaag
    16981 tccgcatgga ccacttcgac cgtgcccgcg acaagatcct gatgggtgcc gagcgccgct
    17041 cgatggccat gagcgaggag gagaagaccc tcaccgccta ccacgaagcg ggccacgcca
    17101 tcgtcggccg cctggtgccc gagcatgacc cggtctacaa ggtcaccatc attccgcgcg
    17161 gtcgcgcgct gggcgtgacc atgtacctgc cggaaggcga caagtactcg atgaaccgcg
    17221 tggcgatcaa gtcgcagctg tgctcgctgt acggtggccg cgttgccgag gaactgatct
    17281 tcggtgccga caaggtcacc acgggcgcct ccaacgatat cgagcgcgcc accaagatgg
    17341 cccgcaacat ggtcaccaag tggggcctgt ccgaccagct cggtccgatc gcctatggtg
    17401 aagaggacga cgaggtgttc ctgggccgct cggtcaccca gcacaagagc gtgtccaacg
    17461 acaccgcgcg ccgcatcgac gaggaagtgc gcaacatcct cgatgaggcc tacgcacgca
    17521 ccaccgagct gatgacggcc aacctggaca agctgcacgc catgtcgcag ctgctgctgc
    17581 agtacgagac catcgacgcg ccgcagatcg acgccatcat ggaaggtcgc gatccgccgc
    17641 cgccggccgg ctggaacaag tcgaacaagg atggtggcaa cgacaagggc ggcgacgccc
    17701 gtccgctgcc gccgatcgca ggcccggccg aatcgcactg acggcccgct gcacgtgaca
    17761 ccagacgagg ccggggcaac ccggcttcgt cgtttccggg ccatcggccc cttccgaagc
    17821 acagaactga cgctggagcc cgcatgtccg ccccgaagcc cgaaccgatt tcccacaccg
    17881 tcgagatggt catcgccacc gtggtgggcg tgggcgtagg ccttggcgcc gacaacctgc
    17941 tgcttggctg cgtggtgggt attgcggtcg gtatcgtgct gagcatcgcc aagaccctgt
    18001 acgtggaccg caagcgccgc cgccgttgag gggtaccggc agggctgcgc cctgcacccg
    18061 tggtagtgcc ggccgctggc cggcaacctc agcggcaaca gcacagcaac ag
//
LOCUS       DAOKIP010000065        18002 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.065,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000065 DAOKIP010000000
VERSION     DAOKIP010000065.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 18002)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18002)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18002
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.065"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..1661)
                     /locus_tag="QEL58_001910"
     CDS             complement(<1..1661)
                     /locus_tag="QEL58_001910"
                     /EC_number="4.2.1.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017165198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="urocanate hydratase"
                     /protein_id="HDS1676388.1"
                     /translation="MTRNDPSRTIAAPTGTTLNAKSWLTEAPLRMLMNNLHPDVAERP
                     QELVVYGGIGRAARDWESFDAIVETLKRLDDDQTLLVQSGKPVGVFRTHADAPRVLIA
                     NSNLVPRWANWDHFNELDKKGLAMYGQMTAGSWIYIGAQGIVQGTYETFVEMGRQHFG
                     GDLTGKWLFTGGLGGMGGAQPLAAVMAGASCLAVECRKSSIDMRLRTGYLDTWTDNLD
                     EALRLIDESCKAGTPKSVGLLGNVADVLAELLKRGVKPDMLTDQTSAHDPVNGYLPQG
                     WTVEQWDDKRVSAPKEVEKAARASMANHIRAMLGFHALGVPTVDYGNNLRQMALEEGV
                     ENAFDFPGFVPAYIRPLFCRGIGPFRWAALSGDPEDIAKTDAKVKELIPDNPHLHRWL
                     DMAAEKIKFQGLPARICWVGLGDRDRLGLAFNEMVANGELKAPVVIGRDHLDSGSVAS
                     PNRETEAMADGSDAVSDWPLLNALLNTASGATWVSLHHGGGVGMGFSQHAGMVIVCDG
                     TEAAAKRIGRVLWNDPATGVMRHADAGYDIAIDCAKEKGLDLPGIL"
     gene            complement(1658..2512)
                     /gene="hutG"
                     /locus_tag="QEL58_001911"
     CDS             complement(1658..2512)
                     /gene="hutG"
                     /locus_tag="QEL58_001911"
                     /EC_number="3.5.1.68"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019337290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-formylglutamate deformylase"
                     /protein_id="HDS1676389.1"
                     /translation="MNAHPEWLTVHEGDAPLIVSFPHTGSELPHDLIGHYHSPWLARR
                     DADWWVHELYDFVRGMGATTVRSAISRSVIDLNRDPSGVSLYPGQNTTGLCPLTTFDN
                     QPLYHAGREPDDAEIARRRDTYFLPYHDALAAQITRLRARHGTVVVYDAHSIRSHIPH
                     LFDGELPQFNLGTAGPSGAPDTSCDNALSDVVENLLKISGMSQVRNGRFKGGWITRHY
                     SNVAGGVHSLQMELACRGYMHEPLPDQVDEHSWPTPLDPDHAAPLRHTLAQVLNACLE
                     FATNRSAA"
     gene            complement(2509..4050)
                     /gene="hutH"
                     /locus_tag="QEL58_001912"
     CDS             complement(2509..4050)
                     /gene="hutH"
                     /locus_tag="QEL58_001912"
                     /EC_number="4.3.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010480534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine ammonia-lyase"
                     /protein_id="HDS1676390.1"
                     /translation="MSNTLVLRPGHVTLAQWRQVYRGSPLALDPAALPVVRASAAAVA
                     AIVAKGAPVYGINTGFGKLASVRIEREDLATLQRNIVLSHAAGVGEPMPASVVRLMMA
                     LKLVSLAQGASGIREDTLLLLEAMLVKGVLPVVPAQGSVGASGDLAPLSHLASVMLGV
                     GEAFIGDERLPAIDALARAGLQPIELGAKEGLALLNGTQFSTAYALAGLFEIETVFQA
                     ALVTGALSVEAAKGSDTPFDPRIHAIRGQRGQIATAATLRTLMQGSDIRESHRDNDVR
                     VQDPYCLRCQPQVMGAALDILRQAATTLEIEANGVSDNPLVFTDTGEALSGGNFHAEP
                     VAFAADMLAMAVCEIGSISERRLAMLVDPALSGLPAFLTPRPGLNSGFMIPQVTAAAL
                     VSENKQRAYPASVDSIPTSANQEDHVSMAAHGARRLMQMAENAANVIGIELLAAAQGC
                     DFHAPLRSSTALESVRATLRAQVPTLEEDRYFHPDMVTATNLVRSGALAQGLSDLLPT
                     VEPQA"
     gene            complement(4047..5270)
                     /locus_tag="QEL58_001913"
     CDS             complement(4047..5270)
                     /locus_tag="QEL58_001913"
                     /EC_number="3.5.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazolonepropionase"
                     /protein_id="HDS1676391.1"
                     /translation="MHVDTLWSNVHLITLDGDGLGVIRDGVLACADGRIVHVGTAGSD
                     AHLQPTTRIDGEGRWISPGLIDCHTHLVYAGNRANEFEQRLQGVSYAEIARAGGGIVS
                     TVRATRAATPEQLARESRPRLLAMRAEGVTTLEIKSGYGLTLPDERKQLQVARALGEE
                     CRVNVVTTFLGAHAIPPGREAQEYTDEVCNVMIPTIAAEGLAEAVDVFCENIAFSPAQ
                     ARQVFEAARAHGLAVKIHAEQLSNQHGAELAAGFGALSADHIEHLDDAGIAAMAAAGT
                     VAVLLPGAFYFTRDTTLPPIAALRAAGVPLALATDSNPGTSPLTSPLLAMNMGATLFR
                     LTVDECIAGFTREAARALGHGNRIGRLAVGMDCDLAIWDIDAPADLVYRIGFNPLHAR
                     VVRGQPDLPASWSNT"
     gene            5338..6708
                     /locus_tag="QEL58_001914"
     CDS             5338..6708
                     /locus_tag="QEL58_001914"
                     /EC_number="3.5.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017159894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formimidoylglutamate deiminase"
                     /protein_id="HDS1676392.1"
                     /translation="MSDSRSPNRFHAAHALLAGGWARDVQLQVQDGRITDIRTGQDAQ
                     PGDTRVGILVPGLPNLHSHAFQRGMAGLTEIGGGDGDSFWSWRELMYRFLAHLRPDAV
                     QAIAAQAYMEMLESGFTRVGEFHYLHHDADGRPHANRAEMSARIAAAADQTGIGLTLL
                     PVFYAHADFGGAAPNPAQRRLIHDVDGFAQLLEAAKPALDALPDAVLGIAPHSLRAVT
                     GEELGALLPLTEGPVHIHIAEQVREVEACLAWSGQRPVQWLFNHAPVDARWCLVHATH
                     ITDDERAAIVASQAVAGLCPITEANLGDGLFPMQAFAREGGRFGVGSDSNVLIDAAEE
                     LRLLEYGQRLTLRGRNVLAPDATRSTGRFLFEGALHGGAQALGVAAGLQVGASADLVE
                     LDAAHPALQARQDDAWLDSWVFAARNGALRSVWRHGRQCVADGRHLQREAITTAFAAA
                     LKGVLG"
     gene            6736..7464
                     /gene="hutC"
                     /locus_tag="QEL58_001915"
     CDS             6736..7464
                     /gene="hutC"
                     /locus_tag="QEL58_001915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014647622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine utilization repressor"
                     /protein_id="HDS1676393.1"
                     /translation="MKASKSATLNQRIRSDLESRILSGEWAPGFRIPYEHELMEQYGC
                     SRMTVNKVLTALAESGMIERRRRAGSFVARQPPHLEQVALEIPDIAMEVGSRGHQYGY
                     RLLQRELRLADAGNAGEVELAGQQKLLAMRCLHLADGRPLALEHRLISPVGVPEVLEV
                     DFNTTAPGSWLLQNVSWTRAQHRISAWGADSATAKLLDVKPGTACLVIERLTWRGEQP
                     ITRVRQVFLGDAWDLVARFAPGAR"
     gene            complement(7566..8549)
                     /locus_tag="QEL58_001916"
     CDS             complement(7566..8549)
                     /locus_tag="QEL58_001916"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012480722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease"
                     /protein_id="HDS1676394.1"
                     /translation="MLPWILALLSALFSCSLAVVYLWWIKRRQKEMQLGLQALAGMHW
                     REFSVLVKRMLREQRGLRELNDPAEESREPSSDFLLSDGPNQWLVSCKHGLAYRIGTA
                     AVNELGAAARLAGARGGVLLTEGRIERDGRSAAEKQAVEVLDGPRLWPLLQPYLPGDI
                     EARVRASARHEALRRIAIAALGSVTLGLLVGLGLQGLHMEEARPVAAAPIAAAPAVAP
                     ATEPAPAAPATPPAPSDTDARRNPNPDAATLDRYQAELARALAGKPGIASGVWLTRQT
                     LAINRTGELDAVWPRVCEEVLHYPALRNVRIQLNARPGVDEPVRWRQCATY"
     gene            complement(8787..9278)
                     /locus_tag="QEL58_001917"
     CDS             complement(8787..9278)
                     /locus_tag="QEL58_001917"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005413869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phasin family protein"
                     /protein_id="HDS1676395.1"
                     /translation="MNRYENDDRRDDDASFGDQAERFSRKLSDSAQQVWLAGLGALGR
                     AQAEGSRFFDGLVKEGEAWESRRRERSGEQGPGWRDNVESSLDEAREKASGTWNKVEK
                     AFDDQVQGVLKRLHVPTADEVTALEARIDALHARLAKLENRAASGADAPAPGSHQSPD
                     SVP"
     gene            complement(9359..9634)
                     /locus_tag="QEL58_001918"
     CDS             complement(9359..9634)
                     /locus_tag="QEL58_001918"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyhydroxyalkanoic acid system family protein"
                     /protein_id="HDS1676396.1"
                     /translation="MSTIDVRHAHALPDAQARAAIEQVAAKLSERFGLKSSWTADVLN
                     FSGSGVDGAIELQPGAVRVTAKLGFLLSAMKGMVEGEIQRVLKEKLG"
     gene            9760..10566
                     /locus_tag="QEL58_001919"
     CDS             9760..10566
                     /locus_tag="QEL58_001919"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FHA domain-containing protein"
                     /protein_id="HDS1676397.1"
                     /translation="MQNLLVHFSQQQQPDQPLRPGVQRIVRQANGSVRLGDAGNGALL
                     LAQFCMDDRGLWLQVGNGIRGIHVNGRPVRRMALLRAGDAVYVDGVEMVLQGEVESLL
                     QAPAPKNEEVSDEQQRLLRGVGGLHHGRSFTLSRARLIGRGNEADIAIDDPAFAEQHA
                     RVEVHGERVLLRDLGNAEGTRVNGVAVRHCWLQAGDQVVFDGQHRFVLEVPHDPRRRP
                     LPAEDESGQDAEQAPVLPAVPRKVRRWPWLLVSALLLAALLSLLLWFGAR"
     gene            10784..11869
                     /gene="serC"
                     /locus_tag="QEL58_001920"
     CDS             10784..11869
                     /gene="serC"
                     /locus_tag="QEL58_001920"
                     /EC_number="2.6.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019300927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoserine/phosphohydroxythreonine
                     transaminase"
                     /protein_id="HDS1676398.1"
                     /translation="MTRAFNFSAGPATLPESVLRQAQAEMLDWHGSGASIVEMSHRGA
                     EFMSVAAEAEADLRRLLDIPDDYAVLFLPGGATTQQALIPLNFAAPGQRADYVVSGHW
                     GKTAVKQAGVYVDVNIAASSEADGYRTLPPRADWQLSPEAAYVHITANETIHGVEFRD
                     VPDTGNVPLIADFSSSIASEPLDVRRYGVIYAGAQKNLGPVGIAVMIIRRDLLERSGQ
                     PRADIFDYRSHVARDSMLNTPPTWNWYLAGLVFKWMLAEGGVAEFAKRNAAKAALVYG
                     AIDGSGGFYRNEVAHAARSRMNIPFFLPNADLDARFVAEAKAAGLLALKGHKVVGGIR
                     ASLYNAMPLAGAEALVAFMADFQQRHG"
     gene            11921..13120
                     /gene="pheA"
                     /locus_tag="QEL58_001921"
     CDS             11921..13120
                     /gene="pheA"
                     /locus_tag="QEL58_001921"
                     /EC_number="4.2.1.51"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005417297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydratase"
                     /protein_id="HDS1676399.1"
                     /translation="MASSKSSKKAPKKAEPAKDSAPTKAKGKAKAASNPAPTLAPLAL
                     ADVRSKIDQIDRDIQNLIAERARFAHQVGKAKGKLAAAVDYYRPEREAQVLRMVVDRN
                     EGPLSDELLVHVYREIMSACLAQQEPLKIGYLGPEGTFSQQAVLKHFGRSALGLPMAS
                     IEEVFQEVEAGNADFGVVPVENSGQGTIQITLDMFLTSNLKICGEVELRVQQYLMSRS
                     GRIEDIERIYAHPQSFMQTSAWLRANLPKAEKIPVSSNAEGARRARNADDAAAIGGES
                     AGHVYGLKKVVTKPIQNDADNTTRFLVVGRNIFPTSGHDRTSVLVFIHDKPGALFDVL
                     SPFARHGISMNRIESRPSHHGKWEYGFFIDLAGHIDDAPMQAALAELEAHSAQIKVLG
                     SYPVAVP"
     gene            13197..14504
                     /gene="aroA"
                     /locus_tag="QEL58_001922"
     CDS             13197..14504
                     /gene="aroA"
                     /locus_tag="QEL58_001922"
                     /EC_number="2.5.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010480557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoshikimate 1-carboxyvinyltransferase"
                     /protein_id="HDS1676400.1"
                     /translation="MSNAQHWIARKGQPLQGSLTIPGDKSVSHRSVMFAALADGTSHI
                     DGFLEGEDTRATARIFSQLGVRIETPSPSQRIVHGVGLDGLKAPDAPLDCGNAGTGMR
                     LLAGLLAGQAFDCTLIGDESLSGRPMRRVTGPLSQMGAKIDTESDGTPPLHVHGGQTL
                     HGIDFASPVASAQIKSAVLLAGLYAQGETQVTEPHPTRDYTERMLSAFGVDIEFSPGK
                     ARLRGGQRLRATDIVVPADFSSAAFYLVAASIIPGSELRLKQVGLNPRRTGLLHALRL
                     MGADITEENPAEQGGEPVADLLVRYAPLKGARIPEALVPDMIDEFPALFVAAAAAEGE
                     TVVSGAAELRVKESDRLAAMATGLRALGMQVDETEDGATLHGGVRLGSGTIESHGDHR
                     IAMAFAIAGQISDGEVRINDIANVATSFPDFDGLARSAGFNLA"
     gene            complement(14701..15273)
                     /locus_tag="QEL58_001923"
     CDS             complement(14701..15273)
                     /locus_tag="QEL58_001923"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HDS1676401.1"
                     /translation="MTATTHEDLHSPQLQQDSSLQHRPTSPWMWIALIVAMFAAALLW
                     LRHSNQEDVAPAPVGERMLPAPEQAAVADAAAPAARQAAPASSQRKAAPVVRNREARP
                     LASNRMPTYPAAALRSGVQGSVIASLNVDTRGNVANAAIVSRSGERSRDLDRAVLNTV
                     QNWKFQPAVHDGRAVASVVRVPVDFRTEQR"
     gene            complement(15393..16031)
                     /locus_tag="QEL58_001924"
     CDS             complement(15393..16031)
                     /locus_tag="QEL58_001924"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005417291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HDS1676402.1"
                     /translation="MSAPRSSSAKSFTVHIPRNALKIAGIAFGVGILLFVLVWLTGRD
                     KEFFRADPAAQTPQETAQVEPLPEPLAAAAGSSDMPDAKPAPVEEEAPKLVETAPPPP
                     APVAEAAPAAPGPAPAATGNSQPMPIAGQSPPPAYPAAALRAGETGSVVVRVDVDATG
                     YPNNATVIQRSGSRELDRAATDAVRRWRFTPAQSNGQAVPGSIEVPFDFKTQ"
     gene            16145..17425
                     /gene="serS"
                     /locus_tag="QEL58_001925"
     CDS             16145..17425
                     /gene="serS"
                     /locus_tag="QEL58_001925"
                     /EC_number="6.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005417289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine--tRNA ligase"
                     /protein_id="HDS1676403.1"
                     /translation="MLDPALLRHQPADLAERLRTSRGFELDVSALESLEADRKRIQVR
                     TQELQSLRNSRSKAIGQAKAKGEDVSAIMAEVAAFADELKASEVALDELREKIDAISM
                     GIPNIPADDVPAGADENDNVEQARWGTPRQFDFKVLDHVELGARNGWLDGETAAKLSG
                     SRFTVLRGPIARLHRALAQFMVDLHTGEHGYEETNVPLLVNADSLRGTSQLPKFEDDL
                     FKTAVGDSTRYLIPTSEVPLTNIVRDEIVDAERLPLRMTAHSMCFRAEAGSGGRDVRG
                     MIRQHQFEKVELVSISRPEESDAEHQRMTRCAEVVLEKLGLPYRKVLLCTGDMGFSAI
                     KTYDLEVWLPSQETYREISSCSNCGDFQARRMQARWRNPATGKPELAHTLNGSGVAVG
                     RAMIAVMENYQNADGSITVPEALRPYMGGLETIA"
     gene            complement(17642..17992)
                     /locus_tag="QEL58_001926"
     CDS             complement(17642..17992)
                     /locus_tag="QEL58_001926"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008268071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ligand-binding protein SH3"
                     /protein_id="HDS1676404.1"
                     /translation="MNYIVTAAHRSEFPHPITLRRDQALVVGERYEGPEGWDDWFLCE
                     AEGQQPGFVPAPVIGRDAQGGAFATEDYCARELDVDPGQVLRGERTLNGWAWCVPENG
                     EPGWVPLEKVRVMA"
BASE COUNT         2861 a         6013 c         6178 g         2950 t
ORIGIN      
        1 aggatgcccg gcagatccag tcccttttcc ttcgcgcagt cgatcgcgat gtcatagccg
       61 gcatcggcat ggcgcatcac gccggttgcc gggtcgttcc acagcacgcg gccgatgcgc
      121 ttggcagcgg cctcggtacc gtcgcagaca atcaccatgc cggcgtgctg cgagaagccc
      181 atgccgacgc cgccgccgtg gtgcagcgac acccaggtgg cgccgctggc ggtattgagc
      241 agggcgttca gcagcggcca gtcggacact gcatcggagc cgtcggccat ggcttcggtt
      301 tcgcggtttg gcgacgccac gctgccgctg tccagatggt cacgaccgat caccaccggc
      361 gccttcagtt cgccgttggc gaccatctcg ttgaaggcca ggcccagtcg atcacgatcg
      421 cccaggccga cccagcagat gcgcgccggc aggccctgga acttgatctt ctcggcggcc
      481 atgtccagcc agcgatgcag gtgcgggttg tccggaatca gttccttcac ctttgcatcg
      541 gtcttggcga tgtcttccgg gtcaccgctc aatgccgccc agcggaatgg gccgatgccg
      601 cggcagaaca gcggacggat ataggccggc acgaaaccgg ggaagtcgaa cgcgttctcc
      661 acgccttctt ccagcgccat ctgccgcagg ttgttgccgt agtccacggt cggcacgccc
      721 agcgcgtgga agccgagcat ggcgcggatg tggttggcca tcgacgcgcg tgcagccttc
      781 tccacttcct tgggagcgga tacgcgcttg tcgtcccact gctcgaccgt ccagccctgc
      841 ggcaggtagc cgttcaccgg gtcgtgcgcg gaggtctggt cggtcagcat gtccggcttc
      901 acgccgcgct tgagcagttc ggccaacaca tcggcgacgt tgccgagcag gcccaccgac
      961 ttgggcgtac cggccttgca cgattcgtcg atcaggcgca gcgcttcgtc caggttgtcg
     1021 gtccacgtat ccaggtaacc ggtgcgcagg cgcatgtcga tgctgctctt gcggcattcc
     1081 actgccaggc aggaggcgcc ggccatcacc gcggccagcg gttgtgcgcc acccatgccg
     1141 cccaggccgc cggtgaacag ccacttgccg gtcaggtcgc ccccgaagtg ctggcggccc
     1201 atctccacga aggtctcgta ggtgccctgc acgatgccct gcgcgccgat gtagatccag
     1261 ctgccggcgg tcatctggcc gtacatggcc aggcccttct tgtccagctc gttgaagtgg
     1321 tcccagttgg cccagcgcgg caccaggttg gaattggcga tcagcacgcg cggtgcgtcg
     1381 gcgtgggtgc ggaacacgcc caccggcttg cctgactgca ccagcagggt ctggtcgtcg
     1441 tccaggcgct tgagcgtttc gacgatcgca tcgaagcttt cccagtcacg cgcggcgcga
     1501 ccgatgccgc cgtacaccac cagttcctgc ggccgttcgg ccacgtccgg gtgcaggttg
     1561 ttcatcagca tgcgcagcgg cgcttcggtc agccagctct tggcgttcag cgtggtgccg
     1621 gtcggcgcgg caatggtgcg ggacgggtcg ttgcgggtca tgcggcgctc cggttcgttg
     1681 cgaattcaag gcaggcattg agcacctgcg ccagggtgtg gcgcagcggt gcggcgtggt
     1741 cggggtcgag cggggtgggc caactgtgtt cgtccacctg gtcgggcagc ggctcgtgca
     1801 tgtagccgcg gcaggccagt tccatctgca ggctgtgcac gccgccggcg acgttgctgt
     1861 agtggcgtgt gatccagccg cccttgaagc ggccgttgcg cacctggctc atgccgctga
     1921 ttttcagcag gttctccact acatcgctca acgcgttgtc gcaggacgtg tccggcgcac
     1981 cggaggggcc ggcggtgccc aggttgaact gcggcagttc gccgtcgaac aggtgtggaa
     2041 tgtgcgagcg gatcgagtgc gcgtcgtaca ccaccacggt gccgtggcgt gcccgcaggc
     2101 gggtgatctg cgcggccagc gcatcgtggt agggcaggaa atacgtgtcg cggcggcgcg
     2161 cgatttccgc gtcatccggt tcgcgcccgg cgtggtacag cggctggttg tcgaaggtgg
     2221 tcagcgggca cagcccggtg gtgttctggc ccgggtacag cgagacaccg ctgggatcac
     2281 gattgagatc gatcaccgaa cgtgagatcg ccgagcgcac ggtggttgcg cccatgccac
     2341 gcacgaagtc gtacaactcg tgcacccacc agtcggcatc gcggcgtgcc aaccacggcg
     2401 agtggtagtg gccgatcagg tcatgcggca gctcgctgcc ggtatgcggg aagctgacga
     2461 tgaggggggc gtcgccctcg tgcacggtca gccattcggg atgggcattc atgcctgcgg
     2521 ttccacggtc ggcaacagat cgctcaggcc ctgcgccagc gcaccgctgc gcaccaggtt
     2581 cgtggcggtc accatgtccg ggtggaagta gcgatcttct tccagcgtcg gcacctgtgc
     2641 gcgcagggtg gcgcgcacgc tttccagcgc ggtgctggag cgcagcgggg cgtggaagtc
     2701 gcagccctgc gcggcggcca gcagctcgat gccgatcacg ttggccgcgt tctcagccat
     2761 ctgcatcagg cggcgcgcgc cgtgcgcggc catcgacaca tggtcttcct ggttggccga
     2821 ggtcgggatc gaatcaacac tggccgggta ggcgcgctgc ttgttttccg agaccagcgc
     2881 ggcggcggtg acctgcggaa tcatgaagcc ggaattcagc cccgggcgcg gggtcaggaa
     2941 cgccggcagg ccggacagcg ccgggtcgac cagcatggcc aggcgacgct cgctgatcga
     3001 accgatctcg cacaccgcca tcgccagcat gtcggcggca aaggcgaccg gctcggcgtg
     3061 gaagttgcca ccggaaaggg cttcgccggt atcggtgaac accagcggat tgtcggacac
     3121 gccgttggct tcgatttcca gcgtggtcgc ggcctggcgc aggatgtcca gtgcagcgcc
     3181 catcacctgc ggctggcagc gcaggcagta cgggtcctgc acgcgcacgt cattgtcacg
     3241 gtgcgattcg cggatgtccg agccctgcat cagcgtgcgc agcgtggcag cggtggcgat
     3301 ctgcccgcgc tgcccacgga tggcgtggat gcgcggatcg aacggcgtgt ccgagccctt
     3361 ggccgcttcc accgacagtg cgccggtcac cagcgcggcc tggaacacgg tctcgatctc
     3421 gaacaggccg gccagcgcat aggcggtgga gaactgggtg ccgttgagca gcgccaggcc
     3481 ttcctttgca cccagttcga tcggctgcaa accggcgcgt gccagtgcat cgatcgccgg
     3541 caggcgttcg tcgccgatga aggcttcgcc cacgcccagc atcacgctgg ccaggtgcga
     3601 gagcggtgcc aggtcacccg aagcacccac cgagccctgt gccggcacca ccggcagcac
     3661 gcccttgacc agcatcgctt ccagcagcag cagggtgtcc tcgcggatgc ccgaagcacc
     3721 ctgcgccagg ctgaccagct tcagtgccat catcaggcgc accacgctgg ccggcatcgg
     3781 ctcgcccaca ccggcagcat gtgagagcac gatgttccgc tgcagggtgg ccaggtcctc
     3841 gcgctcgatg cgcacgctgg ccagcttgcc gaagccggtg ttgatgccat agaccggcgc
     3901 gcccttggcg acgatggcgg ccacggccgc ggcgctggca cgcaccaccg gcagcgcggc
     3961 cgggtccagt gccagcggtg aaccgcgata gacctgccgc cactgggcga gagtgacgtg
     4021 gccggggcga agaaccaggg tgttgctcat gtgttgctcc aggaggcagg caggtcgggc
     4081 tgtccgcgca ccacgcgcgc gtgcagcggg ttgaatccaa tgcgatagac caggtcggcg
     4141 ggggcgtcga tgtcccagat cgccaggtcg cagtccatgc ccacggccag gcggccgata
     4201 cggttgccat ggcccagtgc acgcgccgct tcacgggtga aaccggcgat gcactcgtcc
     4261 acggtcaggc ggaacagggt ggcgcccatg ttcatcgcga gcagtgggct ggtcaggggc
     4321 gaggtgcccg ggttgctgtc ggtggccagc gccagcggca ccccggccgc acgcagcgcc
     4381 gcgatcggcg gcagggtggt atcgcgggtg aaatagaagg cgccgggcag cagcactgcg
     4441 acggtgccgg cggcggccat cgcggcgatg ccggcgtcat cgaggtgttc gatatggtcg
     4501 gccgagagtg caccgaagcc ggccgccagt tcggcgccat gctggttgct cagctgctcg
     4561 gcatggatct tcaccgccag cccgtgggca cgtgccgcct cgaacacctg ccgcgcctgt
     4621 gcgggcgaga aggcgatgtt ctcgcagaac acgtccaccg cttcggccag gccttcggcg
     4681 gcgatggtcg gaatcatcac gttgcacacc tcgtcggtgt actcctgtgc ctcgcggccc
     4741 ggcgggatgg catgtgcgcc gaggaaggtg gtcaccacgt tgacccggca ttcctcgccc
     4801 agtgcacgcg ccacctgcaa ctgcttgcgt tcgtcgggca gggtcaggcc gtagccggat
     4861 ttgatctcga gcgtggtcac gccttcggcg cgcatcgcca gcaggcgtgg gcggctttcg
     4921 cgggccagct gttccggcgt cgcggcgcgg gtggcacgca cggtggagac gatgccgccg
     4981 ccggcacggg cgatctccgc atagctgacg ccctgcaggc gctgctcgaa ctcgttggcg
     5041 cggttgccgg cgtagaccag atgggtgtgg cagtcgatca gtcccggcga gatccagcgg
     5101 ccttcgccgt cgatgcgggt ggtcggttgc aggtgggcat cgctgccggc ggtgccgaca
     5161 tggacgatgc gcccgtcggc gcaggccagc acgccatcgc ggatgacgcc caggccgtcg
     5221 ccgtcgaggg tgatcaggtg gacgttggac cagagggtat cgacgtgcat ggcatccaca
     5281 acgcggctgt gcttatatgt ctatacaata taggcgtcca tttcgggttg tccagccatg
     5341 tccgattcgc gttcccccaa cagattccat gccgcccacg ccctgctggc cggaggctgg
     5401 gcccgcgatg tccagctgca ggtgcaggac ggccgcatca cggacatccg cacggggcag
     5461 gatgcgcagc cgggcgatac ccgggtcggc atcctggtgc cgggcctgcc caacctgcac
     5521 agccacgcgt tccagcgcgg catggccggc ctgaccgaga tcggcggcgg tgacggcgac
     5581 agtttctgga gctggcgcga gctgatgtac cgtttcctgg cccacctgcg cccggatgcg
     5641 gtgcaggcca tcgccgccca ggcctatatg gaaatgctgg aaagcggctt cacccgcgtt
     5701 ggcgaatttc actatctgca ccacgacgcc gacggccgcc cgcatgccaa ccgtgccgag
     5761 atgagtgcga ggattgcggc ggcggccgat cagaccggca tcggcctgac cctgttgccg
     5821 gtgttctatg cccatgccga ctttggcggt gcggcgccga atcccgcgca gcgtcgcttg
     5881 atccacgatg tggacggctt cgcgcagctg ttggaggccg ccaagccggc attggacgcg
     5941 ctgcccgatg cggtgctcgg catcgcgccg cacagtctgc gtgcagtcac gggcgaggaa
     6001 ctgggtgcat tgttgccgct caccgaaggc ccggtgcata tccacatcgc cgagcaggtg
     6061 cgcgaagtcg aggcctgcct ggcctggagc ggccagcgcc cggtgcagtg gctgttcaac
     6121 catgcgccgg tggatgcgcg ctggtgcctg gtgcatgcca cccacatcac cgatgacgag
     6181 cgcgcagcca tcgtagccag ccaggccgtg gccggcctgt gcccgatcac cgaggccaac
     6241 ctgggcgacg gcctgttccc gatgcaggcg ttcgcacgcg aaggcggtcg cttcggcgtc
     6301 ggttccgatt ccaatgtgct gatcgatgcc gccgaagagc tgcgcctgct tgagtacggc
     6361 cagcgcctga ccctgcgcgg gcgcaatgtg ctggccccgg atgccacccg cagcaccggt
     6421 cgcttcctgt tcgagggcgc actgcacggc ggtgcgcagg cgctgggcgt ggccgccgga
     6481 ctgcaggtcg gtgccagtgc cgacctggtt gaactggacg ctgcgcatcc cgcgctgcag
     6541 gcgcgacagg acgacgcatg gcttgacagc tgggtgttcg ccgcacgtaa tggcgcgctg
     6601 cgatcggtct ggcgccatgg ccgccagtgc gtggccgacg gccgccacct gcagcgcgag
     6661 gcgatcacca ccgcctttgc cgccgccctg aagggcgtgc tgggctgatc gcccccgcca
     6721 ccgagacccc attacgtgaa ggccagcaag tccgccacgc tcaaccagcg tatccgcagc
     6781 gatctggaaa gccgcatcct cagcggagag tgggcgccgg gcttccgtat tccgtacgag
     6841 cacgagctga tggagcagta cggttgctcg cggatgacgg tgaacaaggt gctgaccgca
     6901 ctggccgaga gcggcatgat cgagcgccgc cgtcgcgccg gctcgttcgt ggcgcggcag
     6961 ccgccgcacc tggagcaggt ggcgctggag atccccgata tcgcgatgga ggtcggctcg
     7021 cgcggccatc agtatggcta ccgcctgttg caacgcgaac tgcgcctggc cgacgccggc
     7081 aatgccggtg aagtggagct ggccggtcag cagaagctgc tggcgatgcg ctgcctgcac
     7141 ctggccgatg gtcgcccgct ggcgctggaa caccgcttga tcagtccggt gggcgtgccc
     7201 gaggtgctgg aggtcgattt caacaccaca gcgccgggca gctggctgct gcagaacgtg
     7261 tcatggaccc gggcccagca ccgcatcagt gcctggggcg cggacagcgc cacggccaag
     7321 ctgctggacg tgaagcccgg caccgcctgc ctggtgatcg agcgcctgac ctggcgcggt
     7381 gaacagccga tcacccgcgt gcggcaggtg ttcctgggcg acgcctggga tctggtggcg
     7441 cggtttgcgc cgggggcgcg gtaggggcgg atccacgcat cgcgtggatc tactgaatcc
     7501 cggttgggat tacgcgatgc gtgcgaaccc ttggtagatc cacgccatgc gtggatgctg
     7561 cctcatcaat aggtagcgca ctgccgccag cgcaccggct catccacgcc ggggcgggca
     7621 ttgagctgga tgcgcacgtt gcgcagcgcg gggtagtgca gcacttcctc gcagacccgt
     7681 ggccacaccg cgtccagttc accggtgcgg ttgatcgcca gggtctggcg ggtcagccac
     7741 acgccgctgg caatgccggg cttgccggcc agcgcacggg ccagctcggc ctggtagcga
     7801 tccagggtgg ccgcatccgg gttcggattg cggcgcgcgt cagtgtccga aggggccggt
     7861 ggagtggccg gtgcggccgg ggccggctcg gttgcaggcg cgaccgcagg cgccgccgct
     7921 atcggtgcag cggcaacagg tctggcctct tccatgtgca gcccctgcag gcccaggccg
     7981 accagcaacc cgagcgtgac cgagcccaga gcggcaatgg caatccggcg cagcgcctca
     8041 tgcctggcgc tggcgcgcac gcgcgcttcg atgtcgcccg gcaggtaggg ttgcagcagt
     8101 ggccataggc gtgggccgtc cagcacttca accgcctgct tctctgccgc actgcggcca
     8161 tcgcgttcga tccggccctc ggtcagcagc acaccgcccc tggcgccggc caggcgtgca
     8221 gccgcgccca gttcattcac cgcggcggtg ccgatgcggt aggccaggcc atgcttgcat
     8281 gacaccagcc actggttcgg gccgtcgctg agcaggaaat cactgctcgg ctcgcgggat
     8341 tcctcggcag ggtcattcag ttcgcgcagg ccacgctgct cgcgcagcat gcgcttgacc
     8401 agtaccgaga attcgcgcca gtgcatgccg gccaaggcct gcaggccgag ttgcatctcc
     8461 ttctgccgcc gcttgatcca ccacagatag acaacggcaa gggaacagct aaacagggcc
     8521 gacagcaggg ccaggatcca ggggagcatg caggaggtgc gcggagggga cgagtgcgga
     8581 agacgacagt gtaaaggtcg tatcgcgccg ctgggtcagg aggttcctga caggaaacgt
     8641 gacggcgcac gcagattcgg catacggcgg acacgaaaaa cccgccaatc ctgaagccgt
     8701 gaggggaggg aacaaacggc agccgaagcg attggcgggt tgctcgcgat tgtcaatcaa
     8761 aatttattgc attgcaacaa tggcggtcag ggcacgctgt ccggtgactg atggctgccc
     8821 ggggcgggag cgtcggcgcc ggaggcggcg cggttctcca gcttggccag gcgcgcatgc
     8881 agtgcatcga tgcgggcttc cagcgccgtc acttcgtcgg cggtgggtac atgcaggcgc
     8941 ttgaggacgc cctgcacctg gtcgtcgaag gccttttcga ccttgttcca ggtgccggag
     9001 gccttttcgc gggcttcgtc cagcgacgat tccacgttgt cacgccagcc cgggccctgc
     9061 tcgccgctgc gttcacggcg gcgcgactcc caggcctcgc cttccttcac caggccatca
     9121 aagaaacggc tgccttcggc ctgggcacgt ccgagtgcgc caaggccggc cagccagacc
     9181 tgctgggccg agtcgctcag cttgcgcgag aagcgctcgg cctggtcacc gaaagaggcg
     9241 tcgtcgtcgc ggcggtcgtc gttttcgtag cggttcattg cacttcccgt gggagttggg
     9301 cctgtcccga gagtagcgcg cgttggcgtt gcacggccgt gacggccgcc gccgggattc
     9361 agcccagctt ttccttcagc acgcgctgga tctcgccttc gaccatgccc ttcatcgccg
     9421 acagcaggaa gcccagcttg gcggtcacgc gcacggcgcc cggctgcagt tcgatcgcgc
     9481 cgtccacgcc gctgccggag aaattcagca catcggcggt ccacgaggac ttcaggccga
     9541 agcgctcgga cagcttggcg gcaacctgtt cgattgccgc gcgcgcctgt gcgtcgggca
     9601 gggcgtgggc gtggcggaca tcgatggtgg acatgcaggc tcctggcgca gggcggggat
     9661 gatcaatgag ggcgagcatt gtgcgcatcg agggccttcg cgccaagcac tcatcgcagg
     9721 ttcttcttcg ttggcggcca acctgctagg ctgcgccgcg tgcagaacct gcttgttcac
     9781 ttcagtcagc aacaacagcc cgaccagccc ctgcggcccg gggtgcagcg catcgtgcgc
     9841 caggccaacg gcagcgtgcg gctcggcgac gccggcaacg gcgccctgct gctggcgcag
     9901 ttctgcatgg acgaccgcgg cctctggctg caggtcggca acggtatccg cggcatccac
     9961 gtgaacggcc ggccggtgcg ccggatggcc ctgctgcgtg caggcgacgc agtgtatgtg
    10021 gatggcgtgg agatggtgct gcagggtgag gtcgaaagcc tgttgcaggc gccggcgccg
    10081 aaaaacgaag aggtcagcga cgaacagcag cgcctgctgc gtggtgtcgg tggcctgcac
    10141 catggtcgca gcttcaccct gtcgcgggcc cgcctgatcg gccgtggcaa cgaggcggac
    10201 atcgccatcg atgatccggc cttcgccgag cagcatgcgc gggtggaagt gcacggcgag
    10261 cgcgtattgc ttcgcgatct gggcaatgcc gaaggtaccc gggtcaacgg cgtggccgtg
    10321 cgccactgct ggctgcaggc cggcgaccag gtcgtgttcg atggccagca ccgtttcgtg
    10381 ctggaagtgc cgcacgaccc gcgccgtcgg ccgctgccgg ccgaggacga gtccggccag
    10441 gacgcggagc aggcgccggt gctgccggcc gtgccgcgca aggtccggcg ctggccgtgg
    10501 ctgctggtca gtgcgctgct gctggccgca ctgctcagcc tgctgctctg gttcggcgcg
    10561 cgctgatctg aaccctcggg ggccgctctg gtgggtgccg accttggtcg gcacgcttct
    10621 tcggcgggca tgacgccttg cggcgtacgc caaccaaggt tggcggctac cggtgctgtg
    10681 cgcgcggcga atggattcca atgaaaccaa atttcccttg ccgcactagg ccgcaaggct
    10741 ggtgcactgc ggcatactag gggtcttgcc ccacaggtgt gacatgacgc gcgcgttcaa
    10801 cttcagtgcc ggccctgcaa ccttgccgga atcggtcctg cgccaggcgc aggcggaaat
    10861 gctggactgg cacgggtccg gcgcctcgat cgtggaaatg agccatcgcg gcgcggagtt
    10921 catgtccgtg gcggccgagg ccgaggccga cctgcggcgc ctgctcgaca tccccgacga
    10981 ctatgcggtg ctgttcctgc ccggtggcgc caccacccag caggcgctga tcccgctcaa
    11041 cttcgccgcc cccggccagc gcgccgacta cgtggtcagc ggccactggg gcaagaccgc
    11101 ggtcaagcag gccggtgtct acgtcgacgt caacattgcc gccagcagcg aggccgatgg
    11161 ctaccgcacg ctgccgccgc gtgccgactg gcagctctcg cctgaggccg cctacgtgca
    11221 catcaccgcc aacgagacca tccacggcgt cgagttccgt gatgtgcccg acaccggcaa
    11281 tgtcccgttg atcgccgact tcagttcgtc catcgccagc gagccgctgg acgtgcgccg
    11341 ctacggcgtg atctacgccg gcgcgcagaa gaacctcggc ccggtcggca tcgcggtgat
    11401 gatcatccgc cgtgacctgc ttgaacgcag tggccagccg cgcgcggaca tcttcgatta
    11461 ccgctcacac gtcgcccgcg attcgatgct caataccccg ccgacctgga actggtacct
    11521 ggccgggctg gtgttcaagt ggatgctggc cgaaggtggc gtggccgagt tcgccaagcg
    11581 caacgccgcc aaggccgccc tggtgtacgg cgccatcgac ggctccggtg gcttctatcg
    11641 caacgaagtc gcgcatgcgg cgcgttcgcg gatgaacatc ccgttcttcc tgcccaatgc
    11701 cgacctcgat gcccgcttcg tggccgaggc caaggccgcc ggcctgctgg cgctgaaggg
    11761 gcacaaggtg gtcgggggca tccgcgcctc gctgtacaac gccatgccgc tggccggggc
    11821 cgaggcgctg gtcgccttca tggccgattt ccagcagcgt cacggttgag caatgaacgg
    11881 cgcgcaccgt cgggtgcgtg ccccgcaaca aggaattccg atggcaagca gcaaatccag
    11941 caagaaggcg ccgaagaagg cagaaccggc caaggacagc gcgcccacca aggcgaaggg
    12001 caaggccaag gccgcgtcga acccggcacc gaccctggcg ccgctggcgt tggccgatgt
    12061 gcgctcgaag atcgaccaga tcgaccgtga catccagaac ctgattgccg agcgcgcacg
    12121 cttcgcccat caggtgggca aggccaaggg caagctcgcc gccgccgtcg actactaccg
    12181 ccccgaacgc gaagcgcagg tgctgcgcat ggtggtggac cgcaacgaag gcccgctcag
    12241 cgacgagctg ctggtgcacg tctaccgcga gatcatgtcg gcctgcctgg cccagcagga
    12301 gccactgaag atcggctacc tcggcccgga gggtaccttc agccagcagg ccgtgctcaa
    12361 gcacttcggc cgctcggcgc tgggcctgcc gatggccagc atcgaagaag tgttccagga
    12421 agtggaagcg ggcaacgccg atttcggcgt ggtgccggtg gagaattcgg gccagggcac
    12481 catccagatc accctggaca tgttcctgac ctccaacctg aagatctgcg gcgaagtgga
    12541 gctgcgcgtg cagcagtacc tgatgtcgcg cagtggccgc atcgaggaca tcgagcgcat
    12601 ctacgcgcac ccgcagtcgt tcatgcagac ctcggcctgg ctgcgcgcca acctgccgaa
    12661 ggccgagaag attccggtgt cgagcaatgc cgaaggcgcg cgccgtgcgc gcaacgccga
    12721 cgatgcagcg gccatcggtg gcgagagcgc cggccatgtg tacggcctga agaaggtggt
    12781 caccaagccg atccagaacg acgccgacaa caccacccgt ttcctggtgg tgggccgcaa
    12841 catcttcccg acctccggcc atgaccgcac ctcggtgctg gtgttcatcc atgacaagcc
    12901 cggtgcgctg ttcgacgtgc tcagcccgtt tgcccgccac ggcatcagca tgaaccgcat
    12961 tgagtcgcgc ccgtcgcacc acggcaagtg ggaatacggc ttcttcatcg acctggccgg
    13021 ccatatcgac gacgcgccga tgcaggctgc gctggccgaa ctggaagcgc actcggcgca
    13081 gatcaaggtg ctgggttcct atccggtggc cgtgccctga gtgctgctgt ggcggctgcg
    13141 gccgctgccc cctgatgcat cgccggcgct gccggcgttt acggaatgat cgaacgatga
    13201 gcaacgcgca acactggatc gcccgcaagg gccagccgct gcagggcagc ctgaccattc
    13261 ccggcgacaa gtcggtctcg caccgctcgg tgatgttcgc cgcgctggcc gatggcacct
    13321 cgcatatcga cggcttcctg gaaggcgaag acacccgcgc gaccgcgcgc atcttcagcc
    13381 agctgggcgt gcgcatcgaa acgccgagcc cgtcgcagcg catcgtgcac ggcgtcggcc
    13441 tcgacggcct gaaagcaccg gacgcgccgt tggactgcgg caacgccggt accggcatgc
    13501 gcctgctggc cggcctgctg gccgggcagg cgtttgattg cacgttgatc ggcgatgagt
    13561 cgctgtccgg tcgtccgatg cgccgcgtga ccggcccgct gtcgcagatg ggggcgaaga
    13621 tcgataccga gagcgatggc acgccgccgc tgcacgtgca tggcggccag acgctgcacg
    13681 gcatcgactt cgcctcgccg gtggccagcg cacagatcaa gtcggccgta ctgctggccg
    13741 gcctgtatgc gcagggcgaa acccaggtga ccgaaccgca cccgacccgc gactacaccg
    13801 agcgcatgct gtccgcgttt ggcgtggaca tcgaattctc gccgggcaag gcgcgcctgc
    13861 gcggtggcca gcgcctgcgt gccaccgaca tcgtggtgcc ggccgacttc tcctcggccg
    13921 cgttctacct ggtggcggcc agcatcattc ccggctccga gctgcgcctg aagcaggttg
    13981 gcctgaatcc gcgccgcacc ggcctgctgc atgcactgcg cctgatgggc gcagacatca
    14041 ccgaagagaa tccggccgag cagggtggtg aaccggtggc tgatctgctg gtgcgctacg
    14101 cgccgctgaa gggcgcgcgc attccggaag cgctggtgcc ggacatgatc gatgagttcc
    14161 cggcgctgtt cgtggccgct gccgccgccg agggcgagac ggtggtcagc ggcgccgccg
    14221 aactgcgggt caaggaatcc gatcgtctgg ctgcgatggc caccggcctg cgcgcgctgg
    14281 gcatgcaggt ggacgaaacc gaagatggcg ccaccctgca tggtggtgtg cgcctgggca
    14341 gcggcaccat cgaaagccac ggcgaccacc gcattgccat ggcgttcgcc atcgccggcc
    14401 agatcagcga tggcgaagtg cgcatcaacg acatcgccaa cgtcgccacg tccttcccgg
    14461 acttcgacgg tctggcgcgc agcgccgggt tcaacctggc ctgagcggcc acgtccggcg
    14521 gacgacgcga cccggtaggt gccaaccttg gttggcacgc ttccatcgac cggtaggtgc
    14581 caaccttggt tggcacgctt ccatcagccg gtaggtgcca accttggttg gcacgcttct
    14641 ccacataaaa agacggaggc cgaagcctcc gtcgaaacat cacgaacccc tcgtccgcga
    14701 tcaacgctgc tcggtacgga aatccaccgg gacccgcacc acgcttgcta ctgcgcggcc
    14761 gtcatgcacc gcaggctgga acttccagtt ctgcacggtg ttgagcaccg cacgatccag
    14821 gtcgcggctg cgctcgccgc tgcgcgaaac gattgccgcg ttggcgacgt tgccgcgggt
    14881 atcgacattc aggctggcga tcacgctgcc ctgcacacca ctgcgaagtg cagcggcggg
    14941 gtaggtcggc atgcggttgc tggccagcgg gcgcgcttca cgattgcgca ccaccggtgc
    15001 cgccttgcgc tggctggaag ccggtgcggc ctggcgcgcg gcaggcgctg cagcatcggc
    15061 aaccgcggcc tgctcagggg ccggcagcat gcgctcgcca accggtgccg gcgccacatc
    15121 ttcctggttc gagtgacgca gccagagcag ggcggccgcg aacatcgcca cgatcagcgc
    15181 gatccacatc cacggtgatg tgggcctgtg ctgcaggctg gaatcctgct gcagttgcgg
    15241 cgaatgaagg tcttcgtggg tggtggcagt catcgcaaac tccttccgtc aatggacgac
    15301 gtgggcagtg ttgcccgagc catggacgag gagtgtcagc gttgcgtcaa cgcaaccggc
    15361 agggttcagt ttgcctgccg gcaagcgttc agttactgcg tcttgaagtc gaacggcact
    15421 tcaatgctgc ccggcacggc ctggccgttg ctctgcgccg gggtaaagcg ccagcggcgt
    15481 accgcatcgg tggcggcacg gtcgagttcg cgtgagccgc tgcgctggat cacggtcgcg
    15541 ttgttcgggt agccggtggc atccacatcc acgcgcacca ccacgctgcc cgtctcaccg
    15601 gcgcgcaggg cggcggcagg ataggcaggc ggcggcgact ggccggcaat cggcattggc
    15661 tggctgttgc cggtggccgc cggcgcaggg cccggtgcag ccggggccgc ttccgccacc
    15721 ggagcaggcg gcggcggggc ggtttcgacc agcttcgggg cttcttcctc caccggggcc
    15781 ggtttggcat cgggcatgtc gctggagcct gccgccgcgg ccagcggttc cggcaatggc
    15841 tccacctggg ccgtttcctg cggggtctgt gcggccgggt cggcgcggaa gaattccttg
    15901 tcgcggccgg tcagccagac cagcacgaac agcaggatgc ccacgccgaa cgcgataccg
    15961 gcgatcttca gggcgttgcg cgggatatgc acagtgaacg acttggcgga cgacgagcgg
    16021 ggtgcagaca tggaccggac cagtacggaa tagcccgatt ctgccatggc gggaatgaac
    16081 cgggcggcag aaatccgtat aacaagcgat aatcccatcc ctgataccca ccacgacacc
    16141 tgccatgctt gatccagccc tgctccgcca ccagcccgcc gacctcgccg aacgcctgcg
    16201 caccagccgc ggcttcgagc tcgacgtgtc tgccctggag tccctggagg ccgatcgcaa
    16261 gcgcatccag gtgcggaccc aggagctgca gagcctgcgc aacagccgtt ccaaggccat
    16321 cggccaggcc aaggccaagg gcgaggacgt ctcggccatc atggccgagg tcgccgcgtt
    16381 cgccgacgag ctgaaggctt cggaagtggc cctggacgaa ctgcgcgaga agatcgatgc
    16441 gatctcgatg ggcatcccga atattccggc cgatgacgtg ccggccgggg ccgacgagaa
    16501 cgacaacgtc gagcaggcgc gctggggtac cccgcgccag ttcgatttca aggtgctgga
    16561 tcacgtcgag ctcggcgccc gcaatggctg gctggacggc gagaccgccg ccaagctgtc
    16621 cggctcgcgc ttcaccgtgc tgcgcggccc gatcgcgcgc ctgcaccgtg cgctggccca
    16681 gttcatggtc gacctgcata ccggcgagca cggctacgaa gagaccaacg taccgctgct
    16741 ggtcaatgcc gattcgctgc gtggcaccag ccagctgccg aagttcgagg acgacctgtt
    16801 caagaccgcc gtgggtgatt ccacgcgtta cctgatcccg acctcggaag tgccgctgac
    16861 caacatcgtg cgcgacgaga tcgtggatgc cgagcgcctg ccgctgcgca tgaccgcgca
    16921 ttcgatgtgc ttccgcgccg aggctggcag cggtggccgc gacgtgcgcg gcatgatccg
    16981 ccagcaccag ttcgagaagg tcgagctggt ctcgatcagc cgcccggaag aaagcgacgc
    17041 cgagcaccag cgcatgaccc gctgcgccga agtggtgctg gaaaagctgg gcctgccgta
    17101 ccgcaaggtg ctgctgtgca ccggcgacat gggcttctcg gcgatcaaga cctacgacct
    17161 ggaagtctgg ctgccgtcgc aggagaccta ccgcgagatt tcctcgtgct cgaactgcgg
    17221 tgatttccag gcccgccgca tgcaggcccg ctggcgcaac ccggccaccg gcaagccgga
    17281 gctggcgcac accctgaatg gctcgggcgt ggcggtgggc cgcgcgatga tcgcggtgat
    17341 ggagaactac cagaacgccg acggcagcat caccgtgccg gaagcgctgc gcccgtacat
    17401 gggcggcctg gaaaccatcg cctgacaccc tgatcgggtg ggtgccatgc ttgcatggca
    17461 tcgccgtggc tgtggtgggt gccatgcttg catggcattg ctgtcgctct ggtgggggcc
    17521 atgcttgcat ggcacctcag tggctcgggt gggtgccatg cttgcatgga accgaatgca
    17581 cgcacggcgt ggatctacaa tgccggttac atccacgccc tgcgtggatg aaccgccgcg
    17641 atcacgccat gacgcgcacc ttctccaacg gcacccatcc cggttcgccg ttctccggca
    17701 cgcaccacgc ccagccattg agcgtgcgtt ccccgcgcag cacctgcccg ggatccacat
    17761 ccagttcccg cgcgcagtag tcctccgtgg caaatgcgcc accctgcgca tcgcggccga
    17821 tcaccggcgc cggcacgaaa ccgggctgct gtccctcggc ttcgcacagg aaccagtcgt
    17881 cccagccctc cggtccttca tagcgttcgc ccaccaccag cgcctggtca cggcgcaggg
    17941 tgatcgggtg cggaaattcg ctgcggtgcg cagccgtcac gatgtagttc atgcccccag
    18001 cc
//
LOCUS       DAOKIP010000066        17998 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.066,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000066 DAOKIP010000000
VERSION     DAOKIP010000066.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 17998)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17998)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17998
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.066"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(129..1838)
                     /locus_tag="QEL58_001927"
     CDS             complement(129..1838)
                     /locus_tag="QEL58_001927"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014035712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M28 family peptidase"
                     /protein_id="HDS1676405.1"
                     /translation="MPRKLLLCLAAAAALSACKGEDTPAAAPATDTAAAKPAAHSFSP
                     DINAGDFAEMVKTLASDEFEGRAPGSKGEELTVNYIRDQMQRIGLQPGNGDSWFQDVP
                     MTETTADESTVLKITQGGKTTELKFGTDMVVGTRTGQAEVKVDASDLVFVGYGVDAPE
                     QKWNDYAGQDWKGKTVVMFVNDPGFHVDDDKLFDGKRMTYYGRWTYKFEEAARKGAAA
                     ALIVHDTAGASYGWDVVKNSWAGPQYDLPAKDDPEARIPVQGWLSAEAAKTLFAGAGL
                     DLAQAYKDASKRGFKPVPLKATAAVDLKSRIAQKQSRNVVGVLPGSKRADEAVLYMAH
                     WDHLGKHEGETGDNIYNGAVDNATGVAGILEVAEAMAHQQPKPERSVVFLAVTLEESG
                     LLGSKYYVAHPTFPLDKIAGVINIDAMSVAGRAKDVTVTGFGSSELEDILKPLAAAQD
                     RTLHGETSVQSGFYFRSDHFNFAKAGVPALYADGGEDLREGGVEAGRKAAADYGANRY
                     HGPKDEFDAATWKLDGTVEDLQLMYGVGKELAGGDRWPNWYEGNPFKAARDAMMKDKA
                     AAK"
     gene            complement(1923..2585)
                     /locus_tag="QEL58_001928"
     CDS             complement(1923..2585)
                     /locus_tag="QEL58_001928"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014645682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676406.1"
                     /translation="MKTLSIPLLLGVLLAAGPAGAQDNISKVNGSISAEPGQRYGKLD
                     TVNGGIRVGEGAETSSIDTVNGGVKVADRARTGKIETVNGGVRLGREVIAHGSVSTVN
                     GSIFSDRGSQIEGGVETVNGGIGLVESRVGKDVETVNGDITVGIGSQVNGGVHVRKPN
                     FSVSLTASRKPRVIIGPNAVVNGPLQFEREVVLYVHRSARIGPVTGAEPIPFDTETAP
                     AD"
     gene            2681..3979
                     /locus_tag="QEL58_001929"
     CDS             2681..3979
                     /locus_tag="QEL58_001929"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012509829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HDS1676407.1"
                     /translation="MRDNVFPSRRHHIAAARGGRCLLLALAIALALPLPAAAQTTRET
                     ERKLQKLRTELKGVAQERRQIEGQRGQASQQLREADEKVARSGRALAQTETALREQSR
                     ALAEAEQRRSSLQNNLAQQHRELAGLLRAAYQLGNHAPLKLLLSQDTVADANRALAYH
                     RYLQRERAQRITTLTADLKELEALQAQIAERQQKLQGAQRDQKQQAATLAADRRDRAQ
                     TVASLDERFKDQREKEQALGQDAKALETLLANLRAAAARAEAERRAAARRAAAEKAAA
                     EKAARQAKAEGRPPPPTKVPPAVASAPAPKVGGLGWPLSGNLLARYGGKLPDGRTSSG
                     VLIGAPAGSTVTAVADGTVVFSDWMTGYGMILIVDHGNGYMSLYAHNDTLLKDAGARV
                     SRGDAVAKVGNSGGQGVTALYFELRRGGQPVNPDSWLQRR"
     gene            4088..5548
                     /locus_tag="QEL58_001930"
     CDS             4088..5548
                     /locus_tag="QEL58_001930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005407782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HDS1676408.1"
                     /translation="MRAARTATLLLALLPALSWAQQTAPAPSQETSGQAANSEEAVTS
                     KVPLEEIRRFVAVYNAVRAAYVDPVDDKKLMQSAVRGLLLDLDPHSTYFNKEDAQAFD
                     EQANGAYEGIGVELQQQPDNASMKVISPIDDTPAAKAGILAGDLIIAIDGKPISAIDA
                     SEPLRGPAGSKVVLTIVREGKPKPFDVSLTRQTIRVTSVRSRLLEPGYGYIRLSTFQA
                     DTGSDFQKHVQQLQKQSGGQLKGLVLDLRSNPGGLLTAAVQVADDLLDKGNIVSTRGR
                     ISISDARFDATPGDLLKGAPVVVLADAGSASASEVLAGALRDNKRARVVGSRTFGKGS
                     VQTVLPLDNGDSVKLTTARYYTPSGKSIQATGIVPDVELKPAATPAEDALPASLSDYS
                     EATLPGHLRGDDEGTEGYHAGAVLPGDGPINDALAELKNPGSVAARLKAEAAKAEAAK
                     AAKAAAAKPEAKPEQKVEPKADSTPEAKPAPVPAKP"
     gene            complement(5630..6322)
                     /locus_tag="QEL58_001931"
     CDS             complement(5630..6322)
                     /locus_tag="QEL58_001931"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019301614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease"
                     /protein_id="HDS1676409.1"
                     /translation="MFVSLPSRKKAALRWATPVLFAALWLAFLWSISRPDDARGSLWL
                     DWGALSTGLTHPLDWWATLQDGSVLRLFTALFLHADWSHLLGNLVFLLIFGLPAERVL
                     GPWRLLLLFLVGGAVSNLVAIYTMGSPDQIIIGASGAVSALIGAYLALFPGARLGVVI
                     PLGLFLEFVRAPAYLLIGVWAALQVVFAHIGPSFGMVAWWAHIGGFVFGLLYGVYVRA
                     AIARRLRKRHGF"
     gene            6548..7900
                     /locus_tag="QEL58_001932"
     CDS             6548..7900
                     /locus_tag="QEL58_001932"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007968187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein transport protein"
                     /protein_id="HDS1676410.1"
                     /translation="MQTASTIARLTLLAVGVAGALAAADANAAAFQLKENSAKGLGRA
                     FAGSGSAEGDASIIAVNPAGMRQLDGTLIQGDLSAISFKAEFKGQGRKPTGAAQTGGD
                     GGDAGMIAPVPAAYFHMPIGEKAHFGVSLTAPFGFKTEYDNGWVGRYSGLKTDLKAID
                     LGFAASYDVNPYVSFGASVFVEHLTIELSNNIDFGTALAQARVPGYAPGSADGKLTVE
                     GDNNAVGWTVGGLFSIDENTHIGLSYRSKVTHKITGGDATFLMPNDNGRTATILGQTQ
                     PGQFVSTSGKATVKLPASATLSVTHKVNDRWTVMGDVTRTAWSTAFDSVTIDYASAQK
                     DSVLDFGYRDTTFVSLGADYKLSDTVTLRGGVALDQTPTTDAHRDVRVPDTSRKWLSL
                     GVGWTPSANTEYNFGYTHLFTSDPNVNIQPTTNNQGNSLAGKYKVRGDVLAASFQYKF
                     "
     gene            8008..8589
                     /locus_tag="QEL58_001933"
     CDS             8008..8589
                     /locus_tag="QEL58_001933"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014645686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinamide mononucleotide transporter"
                     /protein_id="HDS1676411.1"
                     /translation="MNLSDPNFQLELAANIAVAGSILLAGRNNVHTWWLGIVGCALFA
                     AVFERSHLYADMVLQFFFIAISVLGWWQWLRGDHGSPLPITALRPRAWAWLAPLAVVA
                     TFGYGWMLTRLTNAYAPYIDSAVLVLSVIAQILMMRRKLESWWVWLLVNTVAVPLYYS
                     RGLHLTSILYVGFWINALVALRHWRNLMREEAR"
     gene            complement(8646..11864)
                     /gene="putA"
                     /locus_tag="QEL58_001934"
     CDS             complement(8646..11864)
                     /gene="putA"
                     /locus_tag="QEL58_001934"
                     /EC_number="1.2.1.88"
                     /EC_number="1.5.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019301724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional proline dehydrogenase/L-glutamate
                     gamma-semialdehyde dehydrogenase PutA"
                     /protein_id="HDS1676412.1"
                     /translation="MNAPSSSPAASDAPRPGALLSPELPASPNPFRQAITDAWLKDEA
                     SHVRDLLAQARLPADEQARVQALAADLVGRVRVRAKDQGAIEAFMRQYDLGSEEGVLL
                     MCVAEALLRIPDQDTADKLIRDKLADADWEKHLGGSDSVLVNASTWGLMLTGKLVQMN
                     DATRADAPSAFKRLVGRVGEPVVRLAVRQAMKIMGHQFVMGRTISEALSRSHKGDNAD
                     YRYSFDMLGEGALTMKDALRYLEDYRRAIHAIGGDHKARGGRPDGDVNNAPGISIKLS
                     ALYPRYEHAKRERVLKDLMPGVLELAQLAKSYGIGCTVDAEESDRLELSLDIIEQVFG
                     DASLAGWDGFGVVVQAYQKRTPYTIDHLADMARRAGRRLQVRLVKGAYWDAEIKRAQI
                     EGYPGYPVFTRKQNTDVSYLACAKRLFTHADAIYPMFATHNAHTIAAVRSIANGGVYE
                     HQKLHGMGDDLYAEVVPADRLGLPCRVYAPVGSHEDLLPYLVRRLLENGANSSFVNRI
                     TDERVPIADLIRDPVEMVASFASIPHPKIPLPVDLLRSQNHDRKNSMGANLANDNELR
                     ALAEQINAAVKPWQAAPLVPGANPAGAALPVTNPADTREVVGQWLAADAATVQKALAN
                     AVAAQPAWNRTPAASRAAILEHAADQLEARMPEFMALCVKEAGKSLPDSIAEVREAVD
                     FLRYYAKQAREQFSHAEKLPSPTGESNELQLHGRGVFVCISPWNFPLAIFLGQVAAAL
                     AAGNSVIAKPAEQTNLIGYYAVKLLHDAGVPAEVVQFLPGDGATVGAALTADPRVAGV
                     AFTGSTDTARAINRAMAARDAAIGVLIAETGGQNAFIADSSALPEQLVKDAIGSAFTS
                     AGQRCSAARVLFVQDDIADKVMTMLAGAMKELKVGNPGLLSTDVGPVIDADALKILQD
                     HAVRMDREARLIAAAELSAEAANGTFFAPRAYELKDLGQLHKEIFGPVLHVIRWKGDQ
                     LDEVIDQINATGYGLTLGVHSRIDETVDRISNGVHVGNVYVNRNQIGAVVGVQPFGGQ
                     GLSGTGPKAGGPHYLLRFATEKTVTVNTTAAGGNASLLTLGD"
     gene            12139..12615
                     /locus_tag="QEL58_001935"
     CDS             12139..12615
                     /locus_tag="QEL58_001935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019662226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2244 domain-containing protein"
                     /protein_id="HDS1676413.1"
                     /translation="MIEVLPAPDGSGTQLRLRPPRALDARQFVLLFTVLSGAMWLVSA
                     LGWLAGNAFAPLFALLYSLVLAAALRALWRSGERQEEIRVVPAYVEVIPVPGGSPVFR
                     AHPHWVRLLTDDERVRLASSGRQVEVGSFLAPAERQTLAETLESLLAASDGGNRRR"
     gene            12627..13583
                     /gene="coxB"
                     /locus_tag="QEL58_001936"
     CDS             12627..13583
                     /gene="coxB"
                     /locus_tag="QEL58_001936"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019662225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit II"
                     /protein_id="HDS1676414.1"
                     /translation="MKQSSRWGTKCVAAVAATVAGGLVPALAWAQAADPKPWQLNMGK
                     GVTQTSRLAWESNNLSLIICTVIGVIVFGAMAYAIFKFRKSKGAVAATFSHNTKAEVI
                     WTVIPVIILIVMAWPATANLIKMYDTRDAEMTVKVTGYQWMWKYEYLGENVTFTSRLD
                     RESDRVRQSGIVPTRESHPHYLLDVDNRLVLPVDTKVRFVITSDDVIHAWWVPALGWK
                     QDAIPGFINEAWTSIEQPGVYRGQCAELCGKDHGFMPIVVEAVSKEEFKQWLAQRKPA
                     PPPAPAPAPAAPAEPAAPAGEAPAAPAAAEAGSAPATAASGA"
     gene            13643..15250
                     /gene="ctaD"
                     /locus_tag="QEL58_001937"
     CDS             13643..15250
                     /gene="ctaD"
                     /locus_tag="QEL58_001937"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014501708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit I"
                     /protein_id="HDS1676415.1"
                     /translation="MAHSAVGHDDHHHQQSFFERWFFSTNHKDIGTLYLGFSFIMFII
                     GAAMSVVIRAELAQPGLQFVKPEFFNQMTTVHALVMIFGGVMPAFVGLANWMIPLQIG
                     APDMALPRMNNWSFWLLPVAFSLLLLTLFLPGGAPAGGWTLYPPLSLQGGYNVAFSVF
                     AIHVAGISSIMGAINIIATVLNMRAPGIDLLKMPIFCWAWLITAFLLIAVMPVLAGAV
                     TMLLTDKFFGTSFFNAAGGGDPVMYQHIFWFFGHPEVYIMILPAFGVVSEIIPTFSRK
                     PLFGYQAMVYATAAIAFLSFIVWAHHMFTVGMPLGGEIYFMFATMLISIPTGVKVFNW
                     VSTMWRGSLTFEAPMLWSVAFVILFTIGGFSGLMLAIVAADFQYHDTYFVVAHFHYVL
                     VTGAVFALIAAVYYWWPKWTGRMYSEKWAKVHFWWSIVFVNLLFFPQHFLGLAGMPRR
                     IPDYSVAFADWNLISSIGAFGMFVTPFMMAAILLSSLRNGEKAEARSWEGARGLEWTL
                     PSPAPAHTFTTPPTIRPGDLAHDDITH"
     gene            15259..15528
                     /locus_tag="QEL58_001938"
     CDS             15259..15528
                     /locus_tag="QEL58_001938"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014035724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676416.1"
                     /translation="MHNESPLPIGRVEQGSADALGRVEPCSTDEKQPSMARLYNSEEQ
                     PTSGRLYQSGSVEQQRQRAKRTAAWVGAIAVLVYVGFILSGVIGR"
     gene            15525..16115
                     /locus_tag="QEL58_001939"
     CDS             15525..16115
                     /locus_tag="QEL58_001939"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014645692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase assembly protein"
                     /protein_id="HDS1676417.1"
                     /translation="MSDAPASTPSRSAGLPRLIGVAVAVFLLTFSLVPLYRIACEKVF
                     GVRLERGPGSEASAGAVAGKRTVRVEFDGGVNSRLPWSFHPEQLTMDVVPGELNEALY
                     FARNDSTQAVVGSAVPSVAPARASGFFSKTECFCFTAQTLQAGEKRDMPVRFIVDPDL
                     PPEIRTITLSYTFYRNDALSDRLAPAATSEGAHAAP"
     gene            16129..17004
                     /locus_tag="QEL58_001940"
     CDS             16129..17004
                     /locus_tag="QEL58_001940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014035726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit 3"
                     /protein_id="HDS1676418.1"
                     /translation="MAQTPTDANVYFVPAQSKWPFVGSIAMMVTMVGVASWLNDASWG
                     RWTFYIGIAMLVLTLFWWFSDVVRESQAGNYNRQVDGSFRMGMVWFIFSEVMFFGAFF
                     GALFYTRNLGLSWLSGEGRGVMTNELLWQGYSAGWPTNGPAAIGGAFQTIPAWGLPLI
                     NTLILLTSGVTLTIAHHALKAGNRRQLLVWLGLTVVLGLGFLTLQAEEYIHAYKELNL
                     TLGSGIYGSTFFMLTGFHGAHVLLGTIMLIVMWLRSAKGHFTRDNHFAFEAAAWYWHF
                     VDVVWLMLFMFVYVL"
     gene            complement(17025..17243)
                     /locus_tag="QEL58_001941"
     CDS             complement(17025..17243)
                     /locus_tag="QEL58_001941"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005412025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin transmembrane helix small protein"
                     /protein_id="HDS1676419.1"
                     /translation="MSDSLKTLLVIAFLIVIVWNLGAGLYYLLVDRGQTKRTVNALTR
                     RIGVSVALIVLVIVCIYMGWIKPHGIGG"
     gene            17301..>17998
                     /locus_tag="QEL58_001942"
     CDS             17301..>17998
                     /locus_tag="QEL58_001942"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017172044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SURF1 family protein"
                     /protein_id="HDS1676420.1"
                     /translation="MMRQHTRVIGWLLAVLAMAGFSALGLWQLQRMHAKQAMLDAQGP
                     AVAQALPLAQALAATGALHGVADHGRFLPGVVLLDNQTRHGRAGVKIYRPFRSDDGSV
                     LLVDLGWRALPPDRTLPDVPAPPSPVAVRGLLAPPPSAGLALGPAFSATGEAGRWLAS
                     RLPAEGLARALGLQALPDRVLRLDPALPFGDERDLDLLPNTLPPQRHLGYAVQWFGLA
                     LTVLVVALVLERRR"
BASE COUNT         2890 a         5951 c         6079 g         3078 t
ORIGIN      
        1 ggcgcccccc cgtgtaaaga ggtgccaacc aaggttggca cccacccatg gtggagcgca
       61 aaaaaaaatg cggcgccccg tggggcgccg ctttgacctc aacgatactc agtcgagcaa
      121 gctcgactct acttggctgc ggccttgtcc ttcatcatcg cgtcgcgggc cgccttgaag
      181 gggttgccct cgtaccagtt cggccaacga tcaccgccgg ccagttcctt gccgacgccg
      241 tacatcaact gcaggtcttc gacggtgccg tccagcttcc aggtggccgc gtcgaactcg
      301 tccttcgggc catggtagcg gttggcaccg tagtcggcgg cggccttgcg gcccgcctcc
      361 acgccgccct cgcgcaggtc ctcgccgcca tcggcataca gggccggcac gccggccttg
      421 gcgaagttga agtggtccga acggaagtag aagccactct gcaccgaggt ctcaccgtgc
      481 agggtgcgat cttgggcggc ggccagcggc ttgaggatgt cttccagctc cgagctgccg
      541 aaaccggtca cggtcacgtc cttggcgcgg cccgccaccg acatcgcgtc gatgttgatc
      601 acgccggcaa tcttgtccag cgggaaggtc gggtgcgcga cgtagtactt cgaaccgagc
      661 aggcccgact cttccagggt cacggccagg aacaccaccg agcgctccgg cttcggctgc
      721 tggtgggcca tcgcttcggc cacctcgagg atgccggcca cgccggtcgc gttgtcgacc
      781 gcaccgttgt agatgttgtc gccggtctca ccctcgtgct tgcccaggtg gtcccagtgc
      841 gccatgtaca gcacggcctc gtcggcacgc ttgctgcccg gcagcacgcc caccacgttg
      901 cgcgactgct tctgcgcgat ccggctcttc agatcaaccg ccgcggtggc cttcagcggc
      961 accggcttga aaccgcgctt gctggcgtcc ttgtaggcct gcgccagatc caggccggca
     1021 ccggcgaaca acgtcttggc ggcctccgcg ctcagccagc cctgcaccgg gatacgggct
     1081 tccggatcat ccttggcggg caggtcgtac tgcgggccgg cccaggagtt cttcaccaca
     1141 tcccagccat aggaggcgcc ggcggtgtcg tgcacgatca gcgcggcggc ggcgcccttg
     1201 cgtgcggcct cttcgaactt gtaggtccag cggccgtagt aggtcatgcg cttgccgtcg
     1261 aacagcttgt cgtcatcgac gtggaagccg gggtcgttga cgaacatgac aaccgtcttg
     1321 cccttccagt cctggccggc gtagtcgttc cacttctgct ccggtgcatc gacgccgtag
     1381 ccgacgaaca ccaggtcgct ggcatcgacc ttcacctcgg cttggccggt acgcgtgccg
     1441 accaccatgt cggtgccgaa cttcagctcg gtggtcttgc cgccctgggt gatcttcagc
     1501 acggtcgatt cgtcggccgt ggtttcggtc atcggcacat cctggaacca gctgtcgccg
     1561 ttgccgggct gcaggccgat gcgctgcatc tggtcgcgga tgtagttgac cgtcagctct
     1621 tcgcccttgc tgcccggggc gcggccttcg aactcatccg aggccagggt cttgaccatc
     1681 tcggcaaagt cgccggcatt gatgtccggc gagaacgaat gggcggcggg cttggcggcc
     1741 gcagtgtcgg tggctggcgc ggcggccggc gtatcttcgc ctttgcaggc actgagcgcg
     1801 gccgcggcgg ccaggcacag gaggagtttg cggggcatcg tcgattcctg ggtaacaaag
     1861 ggtggccgta cgttgtgcac gaccggttgg gcgaggatca ccggaccgaa aggcgcggtg
     1921 gctcagtccg ccggggcggt ttcggtgtcg aacgggatcg gctcggcgcc ggtgaccggc
     1981 ccgatgcggg cgctgcggtg cacgtacagc accacctcgc gttcgaactg cagggggcca
     2041 ttgaccacgg cattggggcc gatgatcacg cgcggcttgc ggctggcagt cagcgagacg
     2101 ctgaaattgg gcttgcggac gtgcacaccg ccgttgacct gcgagccgat ccccacggtg
     2161 atgtcaccgt tgacggtctc cacatccttg ccgacgcggc tttcgaccag gccgatgcca
     2221 ccgttcacgg tttcaacgcc gccttcgatc tggctgccac ggtcgctgaa gatgctgccg
     2281 ttgaccgtgc tgacgctgcc atgcgcaatg acttcgcggc ccaggcgcac gccgccgttg
     2341 actgtctcga tcttgccggt gcgtgcgcgg tcggccactt tcaccccgcc gttgacggta
     2401 tcgatactgc tggtttccgc gccttcgcca acgcggatac cgccgttgac cgtatccagc
     2461 ttgccgtagc gctggccggg ttcggcgctg atgctgccgt tgaccttgct gatgttgtcc
     2521 tgggcgccgg ccgggccggc cgcgagcagg acgcccaaca gcagcggaat ggaaagagtt
     2581 ttcatgggga cctcgatgga tgtgcggctg gcaggccgcg tgcggagatg tcaccattcc
     2641 ccggtagccc ccgcaactgc ctgaagtcac tggaaagccc ttgcgcgaca acgtcttccc
     2701 atcacgccga catcacatcg ccgctgcccg cggcgggcgc tgcctgctgt tggcgctggc
     2761 gatcgcgctg gccctgccac tgcccgccgc ggcgcagacc acccgtgaga ccgagcgcaa
     2821 gctgcagaag ctgcgcaccg aactgaaagg cgtggcgcag gagcgtcgtc aaatcgaagg
     2881 ccagcgcggc caggcgtcac agcaactgcg cgaggccgac gagaaggtgg cccgcagcgg
     2941 acgcgcgctt gcgcagaccg agaccgcact gcgtgagcag agccgtgccc tggccgaagc
     3001 cgagcagcgc cgcagcagcc tgcagaacaa cctggcccag cagcaccgcg aactggccgg
     3061 cctgctgcgc gcggcctatc agctgggcaa ccacgcaccg ctgaagctgc tgctgtcgca
     3121 ggacaccgtg gccgatgcca accgtgccct ggcctatcac cgctatctgc agcgcgaacg
     3181 cgcgcagcgc atcaccacgc tgaccgctga cctgaaggaa ctggaagccc tgcaagcgca
     3241 gatcgccgaa cgccagcaga agctgcaggg cgcgcagcgt gaccagaagc agcaggcggc
     3301 caccctggcg gccgatcgtc gtgatcgggc gcagaccgtg gcctcgctgg acgaacgctt
     3361 caaggaccag cgcgaaaagg aacaagcgct gggccaggat gcaaaggcgc tggaaacgct
     3421 gctggccaat ctgcgtgccg cggcggcccg tgccgaagcc gagcgtcgcg ccgccgcgcg
     3481 ccgcgccgct gccgagaaag ccgccgccga gaaggccgca cgccaggcca aggcggaagg
     3541 ccgcccgcca ccgccgacca aggtgccgcc cgcggtggcc tcggcgccgg caccgaaggt
     3601 gggcggactg ggctggccgt tgtcgggcaa tctgctggcc cgctacggcg gcaagctgcc
     3661 cgacgggcgc accagcagcg gcgtgctgat cggcgcgccg gccggcagca ccgtcaccgc
     3721 cgtggccgat ggcacggtgg tgttctccga ctggatgacc ggctacggca tgatcctgat
     3781 cgtcgaccac ggcaacggct acatgagcct gtacgcacac aacgacaccc tgctgaagga
     3841 tgccggcgca cgggtcagcc gcggcgatgc ggtggccaag gtcggcaatt ccggcggcca
     3901 gggcgtcacc gcgctttact tcgagctgcg ccgtggcggg cagccggtca atccggacag
     3961 ctggctacag cggcgctgaa tccggcgccg tcgcgtgacg ggcggattca acgggaattt
     4021 agctgtgctt cgcgcataat cggcgcatgt gccttgggca cgatgccacc gtcgacagga
     4081 gtgatccatg cgcgcagccc gtaccgccac cctcttgctg gccctgttgc cagcgctgtc
     4141 ctgggcgcag cagaccgcgc ccgccccgag ccaggaaacc agtgggcagg cagcgaacag
     4201 cgaggaggcg gtaacctcga aggtgccgct ggaggaaatc cgccgtttcg tggccgtgta
     4261 caacgcggtg cgcgccgcct acgtggatcc ggtggacgac aagaagctga tgcagtcagc
     4321 ggtgcgtggc ctgctgctcg acctcgatcc gcacagcacc tacttcaaca aggaagacgc
     4381 gcaggccttc gacgagcagg ccaacggcgc ttacgagggt atcggcgtgg agctgcagca
     4441 gcagccggac aacgccagca tgaaggtgat ctcgccgatc gacgacacgc cggcagccaa
     4501 ggccggcatc ctcgccggtg acctgatcat cgccatcgac ggcaagccga tcagcgcgat
     4561 cgacgccagc gagccgctgc gcggcccggc cggcagcaag gtggtgctga ccatcgtgcg
     4621 cgaaggcaag ccgaagccgt tcgacgtcag cctcacccgg cagaccatcc gcgtgaccag
     4681 cgtgcgcagc cgcctgctgg agccagggta cggttacatc cgcctgagca ccttccaggc
     4741 cgataccggt tcggacttcc agaagcacgt gcagcagctg cagaagcagt ccggtggcca
     4801 gctcaagggc ctggtgctgg acctgcgcag caacccgggt ggcctgctga ccgccgcggt
     4861 gcaggtggcc gatgatctgc tcgacaaggg caacatcgtc agcacccgcg gccgcatcag
     4921 catcagcgac gcacggttcg atgcgacccc cggcgacctg ctgaagggcg caccggtggt
     4981 ggtgctggcc gatgccggtt cggccagtgc ctcggaagtg ctggccggcg cgctgcgcga
     5041 caacaagcgc gcccgcgtgg tcggcagccg caccttcggc aagggttcgg tgcagaccgt
     5101 gctgccgctg gacaacgggg attcggtgaa gctgaccacc gcgcgctatt acacgcccag
     5161 cggcaagtcg atccaggcca ccggcatcgt gccggacgtt gaattgaaac ccgctgccac
     5221 gccggccgag gatgcactgc cggccagcct cagcgactac agcgaagcga ccctgccggg
     5281 ccacctgcgc ggcgacgatg aaggcaccga gggctaccac gccggtgccg tgctgccggg
     5341 cgatggcccg atcaacgatg cgctggccga actcaagaac ccgggttcgg tggcggcacg
     5401 cttgaaggcc gaagccgcca aggcggaggc ggccaaggcc gcgaaggccg ctgcggcgaa
     5461 gcccgaagcg aagccggagc agaaagtcga accgaaggcg gacagcacgc cggaagccaa
     5521 gcccgcgccg gtcccggcca agccttgatt ctgtagagtc gagccatgct cgactgatct
     5581 acgagcgggt gagcgtggag ccggccagcg gccggcacta cccggtaggt cagaatccgt
     5641 ggcgcttgcg cagccggcgc gcgatggccg cgcgcacgta gaccccgtac agcaggccga
     5701 acacgaagcc gccgatgtgc gcccaccagg ccaccatgcc gaagctgggg ccgatgtgcg
     5761 cgaacaccac ctgcagtgcg gcccagacgc cgatgagcag ataggccggg gcgcgcacga
     5821 actccaggaa caggccgagc gggatcacca cgcccaggcg ggcgccgggg aacagggcca
     5881 ggtaggcgcc gatcagcgcc gagaccgcgc cgctggcgcc gatgatgatc tggtccgggc
     5941 tgcccatggt gtagatcgcc accaggttgg acaccgcgcc gccgaccagg aacagcagca
     6001 gcaaccgcca cggccccagc acgcgctcgg cgggcaggcc gaagatcagc aggaacacca
     6061 ggttgcccag caggtgtgac cagtccgcgt gcaggaacag ggcggtgaac aggcgcagca
     6121 cgctgccgtc ctgcagggtc gcccaccagt ccagcgggtg ggtcagcccg gtggacaggg
     6181 cgccccagtc cagccagagg ctgccgcggg catcgtccgg gcgcgagatc gaccacagga
     6241 acgccagcca caatgccgca aacagcacgg gcgtggccca gcgcagggcc gccttcttgc
     6301 gcgacgggag ggagacgaac atggcattag cctagcgtgc gggcgcttgt ggcggggatg
     6361 gtcctgttca gcttttgaga cgaaaaaacc gccggcgctg ttattgtttc attaacagct
     6421 ctgggtaata ctcgcatacg gcgtcgtatg tcgggagggg aatccggcgc gctccgaagg
     6481 gccccagggc cggccgggcg caggcgcact cagagcacca tcaccgctta ccggagagag
     6541 aactacgatg caaaccgctt ccaccattgc ccgtttgacc ctgctggccg tcggcgttgc
     6601 cggtgcgctg gccgccgccg atgccaacgc cgccgccttc cagttgaagg aaaacagtgc
     6661 caagggcctc ggccgtgcgt tcgccggctc cggcagcgcc gagggcgacg cctccatcat
     6721 cgccgtcaac ccggccggca tgcgtcagct ggacggcacc ctgatccagg gtgacctgag
     6781 cgccatcagc ttcaaggccg agttcaaggg ccagggtcgc aagccgaccg gcgccgcgca
     6841 gaccggcggt gacggcggcg acgctggcat gatcgccccg gttccggccg cgtacttcca
     6901 catgccgatc ggcgagaagg cccacttcgg tgtgtcgctg actgctccgt ttggtttcaa
     6961 gaccgagtac gacaatggtt gggtgggtcg ctacagcggc ctgaagaccg acctgaaggc
     7021 catcgatctt ggctttgccg catcctatga cgtcaacccg tacgtctcgt tcggcgcgtc
     7081 ggtgttcgtt gaacacctga ccatcgagct cagcaacaac atcgacttcg gtactgcgtt
     7141 ggcccaggcc cgcgtgccgg gctacgcccc gggcagcgcc gatggcaagc tgaccgttga
     7201 aggtgacaac aatgccgtgg gctggacggt cggtggcctg ttctcgatcg atgagaacac
     7261 ccacatcggc ctgagctatc gctccaaggt cacgcacaag atcaccggcg gcgatgccac
     7321 cttcctgatg ccgaatgaca atggccgcac cgcgaccatc ctgggtcaga cccagccggg
     7381 ccagttcgtc agcaccagtg gcaaggcaac cgtgaagctg ccggcgtcgg cgaccctgag
     7441 cgtgacgcac aaggtcaacg atcgctggac cgtgatgggt gacgtcaccc gcaccgcttg
     7501 gtcgaccgca ttcgactctg tcaccatcga ctatgcttcg gcccagaagg actctgtgct
     7561 ggacttcggc tatcgcgata ccaccttcgt gtcgctgggt gcggactaca agctgagcga
     7621 taccgtcacc ctgcgcggtg gtgtcgcgct ggaccagacc ccgaccaccg acgctcatcg
     7681 tgacgtccgc gtgccggata ccagccgcaa gtggctgtcg ctgggcgtgg gctggacccc
     7741 gtcggcgaac accgaataca acttcggcta cacccacctg ttcaccagcg acccgaacgt
     7801 gaacatccag ccgaccacca acaatcaggg caactcgctg gctggcaagt acaaggtccg
     7861 tggcgacgtg ctggctgctt cgttccagta caagttctga tccaggcgtt cgcctgaagc
     7921 aggacacgga gggccccgcg caagcggggc ctttcctttt tcatggcgtg ccctccctgc
     7981 agggcgcgga tccatgacaa tagggcgatg aacctgtccg acccgaactt ccagctggag
     8041 ctggctgcca acatcgccgt cgccggctcg atcctgctgg ccggccgcaa caacgtgcac
     8101 acctggtggc tgggcatcgt cggctgtgca ctgttcgcag cagtgttcga acgctcgcat
     8161 ctgtacgcgg acatggtgct gcagttcttc ttcatcgcca tcagcgtgct gggctggtgg
     8221 cagtggctgc gtggcgacca tggttcgccg ctgccgatca ccgcgctgcg cccgcgtgcg
     8281 tgggcctggc tggcgccgtt ggcggtggtg gccaccttcg gttatggctg gatgttgacc
     8341 cgcctgacca acgcctacgc gccgtacatc gattcggcgg tgctggtgtt gagcgtgatc
     8401 gcgcagatcc tgatgatgcg gcgcaagctg gaatcgtggt gggtgtggct gctggtgaac
     8461 accgtggcgg tgccgctgta ctacagccgt ggcctgcacc tgacctcgat cctgtatgtc
     8521 ggcttctgga tcaacgcgct ggtggcgctg cgccattggc gcaacctgat gcgcgaggaa
     8581 gcacgttgag caacaaaaaa ccccgctttc gcggggtttt tcgttttact gcatcaaccg
     8641 ggcgatcagt cgcccagggt cagcagcgag gcgttgccgc ccgcggcggt ggtgttcacc
     8701 gtcaccgtct tctcggttgc gaagcgcagc aggtagtgcg ggccaccggc cttcgggccg
     8761 gtgccggaca ggccctggcc gccgaacggc tgcacgccga ccaccgcacc gatctggttg
     8821 cggttgacgt agacgttgcc gacgtggaca ccgttgctga tgcgatcaac ggtttcgtcg
     8881 atgcgcgaat gcacgcccag ggtcaggccg tagccggtgg cgttgatctg atcgatcacc
     8941 tcgtcgagct ggtcgccctt ccagcggatc acgtgcagca ccggcccgaa gatttccttg
     9001 tgcagctgac ccaggtcctt cagctcatac gcgcgcggtg cgaagaaggt gccattggcg
     9061 gcttctgcgg acagctcggc ggcggcgatc aggcgtgctt cgcggtccat gcgcacggcg
     9121 tggtcctgca ggatcttcag tgcatcggcg tcgatcaccg ggccgacgtc ggtggacagc
     9181 aggcccgggt tgccgacctt cagttccttc atcgcaccgg ccagcatggt catcaccttg
     9241 tcggcgatgt cgtcctgcac gaacagcacg cgcgcggccg agcaacgctg gccagcggag
     9301 gtgaaggccg aaccgatggc gtccttgacc agctgttccg gcagcgccga ggagtcggcg
     9361 atgaaggcgt tctggccacc ggtctcggcg atcagcacgc cgatggcggc gtcacgggcg
     9421 gccatcgcgc ggttgatcgc acgcgcggtg tcggtggagc cggtgaaggc cacgccggcc
     9481 acgcgcgggt cggcggtcag cgcggcgccg acggtggcac cgtcgcccgg caggaactgc
     9541 actacctcgg ccggcacgcc ggcgtcatgc agcagcttca ccgcgtagta gccgatcagg
     9601 ttggtctgct cggccggctt ggcgatgacg ctgttgccgg ccgccagagc ggcagcgacc
     9661 tggcccagga agatcgccag cgggaagttc cacgggctga tgcagacgaa cacgccacgg
     9721 ccgtgcagct gcagctcgtt ggattcaccg gtcgggctcg gcagcttctc ggcgtggctg
     9781 aactgctcgc gtgcctgctt ggcgtagtag cgcaggaaat ccaccgcttc gcgcacttcg
     9841 gcgatgctgt cgggcaggct cttgccggcc tccttcacgc acagcgccat gaactccggc
     9901 atgcgcgctt ccagctggtc ggcggcgtgc tcgaggatgg cggcgcggct ggcggccggg
     9961 gtacggttcc aggccggctg cgcggccacg gcgttggcga gggccttctg cacggtggcg
    10021 gcatcggcgg ccagccactg gccgaccact tcgcgggtgt cggccgggtt ggtcaccggc
    10081 agcgcggcgc cggccgggtt cgcacccggt accagcgggg cggcctgcca gggcttcacg
    10141 gccgcgttga tctgctcggc cagggcgcgc agttcgttgt cgttggcgag gttggcgccc
    10201 atggagttct tcctgtcgtg gttctggctg cgcagcaggt caaccggcag cgggatcttc
    10261 gggtggggga tcgaggcgaa cgaggcgacc atctcgaccg gatcgcggat caggtcggcg
    10321 atcggcacgc gttcgtcggt gatgcggttg acgaaactgg agttggcgcc gttttccagc
    10381 aggcggcgca ccaggtatgg cagcaggtct tcatgcgaac cgaccggcgc atacacgcgg
    10441 cagggaaggc cgaggcggtc ggccggtacc acttcggcgt acaggtcgtc gcccatgccg
    10501 tgcagcttct ggtgctcgta cacgccaccg ttggcgatgc tgcgcaccgc ggcgatggtg
    10561 tgcgcgttgt gcgtggcgaa catcgggtag atcgcgtcgg catgggtgaa cagccgcttg
    10621 gcgcaggcca ggtaggacac gtcggtgttc tgcttgcggg tgaacaccgg gtagcccggg
    10681 tagccttcga tctgcgcgcg cttgatctcg gcatcccagt aggcgccctt gaccaggcgc
    10741 acctgcaggc gacgaccggc gcggcgcgcc atgtcggcca ggtggtcgat cgtgtacggc
    10801 gtgcgcttct ggtaggcctg cacgaccacg ccgaagccat cccagccggc cagcgaggca
    10861 tcgccgaaca cctgttcgat gatgtccagc gacagttcca ggcggtcgga ttcttcggcg
    10921 tcgacggtgc agccgatgcc gtagctcttg gccagctgcg ccagttccag cacgcccggc
    10981 atcaggtcct tcagcacgcg ctcgcgcttg gcgtgctcgt agcgcgggta cagcgccgac
    11041 agcttgatcg agatgcccgg ggcgttgttg acgtcaccat ccggacggcc gccgcgtgcc
    11101 ttgtgatcgc cgccgatggc gtggatcgca cgacggtagt cttccaggta gcgcagcgcg
    11161 tccttcatgg tcagcgcgcc ttcgcccagc atgtcgaagg agtagcggta gtctgcgttg
    11221 tcacccttgt gcgaacgcga cagcgcttcg ctgatcgtgc ggcccatgac gaactggtgg
    11281 cccatgatct tcatcgcctg gcgcacggcc aggcgcacca ccggctcacc gacgcgcccg
    11341 accaggcgct tgaacgcgct gggcgcatcg gcgcgggtgg cgtcgttcat ctgcaccagc
    11401 ttgccggtca gcatcaggcc ccaggtggag gcgttgacca gcaccgagtc gctgccgccc
    11461 aggtgctttt cccagtcggc gtcggccagc ttgtcgcgga tcagcttgtc ggcggtgtcc
    11521 tggtccggaa tgcgcagcag cgcctcggcc acgcacatca gcagcacgcc ttcctcgctg
    11581 cccaggtcgt actggcgcat gaaggcttcg atcgcgccct ggtccttggc gcgcacgcgc
    11641 acccggccga ccagatcggc ggccagggcc tgcaccctgg cctgctcatc ggcgggcagg
    11701 cgggcctgcg ccagaagatc gcgcacgtgg ctggcctcgt ccttcaacca ggcatcggtg
    11761 atggcctggc ggaacgggtt gggggacgcc ggcagttccg gcgacagcag cgcgccggga
    11821 cgcggagcgt cgctggcggc aggggaggag gagggtgcgt tcatgccggt ccggccagtg
    11881 gaaaacttgg cgattttaat catttttccg ggttccggaa gtgccccgca gccaccttcg
    11941 tgaagtgctg atagccccta gctgcggtgg attcagcgtg ttcagcatgc tcaacaatat
    12001 ttgtgctgaa ttcgtcattc gtgccgccga cctcatgctg tgttgcagca tgggaaaaag
    12061 tgtgaatgca cccttgctac cggcgagagg gcggggctac catcgagacg tttcccgcgg
    12121 caggaacgcg gttgcgacat gatcgaggtg cttccagctc cggatgggtc aggtacgcag
    12181 ctgcggctgc gtcccccacg ggcgctcgat gcccggcagt tcgtcctgtt gttcaccgtg
    12241 ttgtcgggtg cgatgtggct ggtgtccgcc ctcgggtggt tggccggcaa tgcattcgcc
    12301 cccctgttcg cgctgctgta cagcctggtg ctggcggcgg cgctgcgtgc cttgtggcgc
    12361 agcggagaac ggcaggagga gatccgggta gtgccggcgt acgtggaggt catccccgta
    12421 cccggtggat cgccggtgtt ccgggcccac ccccactggg tgcgcctgct caccgacgat
    12481 gagagggtcc ggctggcatc cagcggccgg caggtggagg tggggagttt cctcgcgccg
    12541 gccgaacgtc agacgcttgc agagacactt gaaagcttgc tcgccgccag cgatggcggc
    12601 aaccgacgac gctaagggtc taggcaatga agcaaagcag caggtggggc acgaagtgcg
    12661 ttgcagcggt cgccgccacg gtggccgggg gactggttcc ggcattggca tgggcccagg
    12721 cggccgatcc caagccgtgg cagctgaaca tgggcaaggg ggtgacccag acctcgcgcc
    12781 tggcctggga gtcgaacaac ctgtcgttga tcatctgcac ggtgatcggc gtcatcgtgt
    12841 tcggtgcgat ggcctacgcc atcttcaagt tccgcaaatc caagggcgcg gtcgccgcca
    12901 ccttcagcca caacaccaag gccgaggtga tctggaccgt gatcccggtg atcatcctga
    12961 tcgtgatggc ttggccggcc acggccaacc tgatcaagat gtacgacacc cgcgatgccg
    13021 agatgacggt gaaggtcacc ggctaccagt ggatgtggaa gtacgaatac ctcggcgaga
    13081 acgtcacctt caccagccgc ctggaccgtg agtccgaccg cgtgcggcag agcggcatcg
    13141 tgccgacccg cgagagccat ccgcattacc tgctggacgt ggacaaccgg ctggtgctgc
    13201 cggtggatac caaggtgcgc ttcgtcatca cctccgatga cgtgatccat gcctggtggg
    13261 tgccggcgct gggctggaag caggacgcca tccccggctt catcaacgag gcctggacca
    13321 gcatcgagca gcccggcgtg taccgcggcc agtgcgccga gctgtgcggc aaggaccatg
    13381 gcttcatgcc gatcgtggtc gaggcggtgt ccaaggagga attcaagcag tggctggcgc
    13441 agcgcaagcc ggcgccgccg cccgcgcctg cgcctgcgcc tgcggcaccg gcggaacccg
    13501 cggcgccggc cggtgaggca ccggcagcgc ctgctgctgc agaagccggc agcgcacctg
    13561 ccaccgcagc cagcggcgcg tgatgtaaag cccgcggccg cctgcggctg cggtgacaac
    13621 cgattctgag aggtgttttg caatggcgca ctcggcagtt gggcacgacg atcaccatca
    13681 ccagcagagt ttcttcgagc gttggttctt ctcgaccaac cacaaggaca tcggcacgct
    13741 gtacctgggt ttcagcttca tcatgttcat catcggtgcg gcgatgagcg tggtgatccg
    13801 cgccgaactg gcgcagccgg gcctgcagtt cgtcaagccc gagttcttca accagatgac
    13861 caccgtgcat gcgctggtga tgatcttcgg tggcgtgatg ccggccttcg tcggcctggc
    13921 caactggatg atcccgctgc agatcggcgc gccggacatg gcgctgccgc gcatgaacaa
    13981 ctggtcgttc tggctgctgc cggtggcctt cagcctgctg ctgctgacct tgttcctgcc
    14041 cggtggcgcg ccggccggtg gctggacgct gtacccgccg ctgtcgctgc agggtggcta
    14101 caacgtggcc ttcagcgtgt tcgccatcca cgtggccggc atcagttcga tcatgggcgc
    14161 gatcaacatc atcgccaccg tgctgaacat gcgcgcgccg ggcatcgacc tcctgaagat
    14221 gccgatcttc tgctgggcct ggctgatcac cgcgttcctg ctgatcgcgg tgatgccggt
    14281 gctggccggc gcggtgacca tgctgctgac cgacaagttc ttcggtacca gctttttcaa
    14341 tgctgccggt ggcggtgacc cggtgatgta ccagcacatc ttctggttct tcgggcaccc
    14401 cgaggtctac atcatgatcc tgcccgcctt cggcgtggtc agcgagatca tcccgacctt
    14461 cagccgcaag ccgctgttcg gctaccaggc gatggtgtac gccaccgccg cgatcgcgtt
    14521 cctgtcgttc atcgtctggg cccaccacat gttcaccgtg ggcatgccgc tgggcggcga
    14581 gatctacttc atgttcgcca ccatgctgat ctcgatcccg accggcgtga aggtgttcaa
    14641 ctgggtcagc accatgtggc gtggctcgct cacgttcgag gcgccgatgc tgtggtcggt
    14701 ggccttcgtc atcctgttca ccatcggtgg cttctccggc ctgatgctgg cgatcgtggc
    14761 ggcggacttc caataccacg acacctactt cgtggtggcg cacttccact acgtgctggt
    14821 aaccggcgcg gtgttcgcgc tgatcgccgc ggtgtactac tggtggccga agtggaccgg
    14881 gcgcatgtac agcgagaagt gggccaaggt gcacttctgg tggtcgatcg tgttcgtcaa
    14941 cctgctgttc ttcccgcagc acttcctcgg cctggccggc atgccgcgcc gcattcccga
    15001 ctacagcgtg gccttcgccg actggaacct gatcagctcg atcggtgcgt tcggcatgtt
    15061 cgtcaccccg ttcatgatgg cggcgatcct gctgtcctcg ctgcgcaacg gtgaaaaggc
    15121 cgaggcgcgc agctgggaag gcgcgcgtgg cctggagtgg acgctgccgt cgccggcacc
    15181 ggcgcacacc ttcaccacac cgccgaccat ccgcccgggc gacctggcgc atgacgacat
    15241 cacgcattga ggtggggcat gcataacgag agcccgctcc cgatcggtag agtcgagcaa
    15301 ggctcggctg atgccttggg tagagtcgag ccatgctcga ctgacgaaaa gcagccgagc
    15361 atggctcggc tctacaacag cgaagagcag ccgaccagcg gtcggctcta ccagagcggg
    15421 agcgtcgagc agcagcgcca gcgcgccaag cgtaccgcgg cctgggtcgg cgccatcgcc
    15481 gtgctggtct acgtcggctt catcctcagc ggggtgatcg gccgatgagc gacgcaccgg
    15541 ccagcacccc gtcacgcagc gccgggttgc cgcgcctgat cggcgtggcg gtagcggtgt
    15601 tcctgctgac gttctcgctg gtgccgttgt accgcatcgc ctgcgagaag gtgttcggcg
    15661 tgcgcctgga gcgtggcccc ggcagcgagg ccagcgcggg cgcggtggcc ggcaagcgta
    15721 ccgtgcgcgt cgagttcgat ggcggcgtca attcgcgcct gccatggtcg ttccatcccg
    15781 agcagctgac catggacgtg gtgcccggcg agctcaacga agcgctgtac tttgcccgca
    15841 acgacagcac gcaggccgtg gtgggaagtg ccgtgccttc ggtggcgccg gcgcgcgcgt
    15901 cgggattctt cagcaagacc gagtgcttct gcttcaccgc gcagacgctg caggccggcg
    15961 agaagcgcga catgccggta cgtttcatcg tcgatccgga cctgccgccg gagatcagga
    16021 cgatcacctt gtcctacacc ttctaccgca acgacgcgtt gtccgatcgg ctggccccgg
    16081 ccgccacttc ggaaggcgcg cacgccgcac cctgacccgg ataccgacat ggcccagaca
    16141 ccgaccgacg ccaacgtgta cttcgtcccg gcccagagca aatggccgtt cgtgggctcc
    16201 atcgcgatga tggtgaccat ggtgggcgtg gccagctggc tcaacgatgc cagctgggga
    16261 cgctggacgt tctacatcgg catcgcgatg ctggtgctga ccctgttctg gtggttcagc
    16321 gacgtggtgc gcgaatcgca ggccggcaac tacaaccgcc aggtcgacgg ctcgttccgg
    16381 atgggcatgg tctggttcat cttctccgaa gtgatgttct tcggcgcctt cttcggcgcg
    16441 ctgttctaca cccgcaatct cggcctgtcg tggctgagcg gcgaaggccg cggggtgatg
    16501 accaacgagc tgctctggca gggctattcc gctggatggc cgaccaatgg accggccgcg
    16561 atcggtggcg cgttccagac catcccggcc tggggcctgc cgctgatcaa cacgctgatc
    16621 ctgctcactt ccggcgtgac cctgaccatc gcccatcacg cactgaaggc cggcaaccgc
    16681 cgccagctgc tggtctggct gggcctgacc gttgtgctcg gtctcggctt cctgaccctg
    16741 caggcagagg aatacatcca cgcctacaag gaactgaacc tgacgctggg ctcgggcatc
    16801 tacgggtcga cgttcttcat gctgaccggc ttccacggcg cgcacgtgct gctgggcacg
    16861 atcatgctga tcgtgatgtg gctgcgctcg gccaagggcc atttcacccg cgacaaccac
    16921 ttcgcgttcg aagccgccgc ttggtactgg cacttcgtcg acgtggtgtg gctgatgctc
    16981 ttcatgttcg tctacgtgct ttgactgcgc aggcgacggc ggcctcagcc gccgatgccg
    17041 tgcggcttga tccagcccat gtagatgcac acgatcacca gtacgatcag ggccaccgac
    17101 accccgatgc ggcgtgtcag tgcgttgacc gtgcgcttgg tctggccgcg gtcgaccagc
    17161 aggtaataca ggccggcgcc cagattccag acgatgacga tcagaaacgc gattaccagc
    17221 agggtcttca gcgaatcact catgcgcggc tcgagggcag ggtggatgcg cctatctgac
    17281 cgcgtttgca cggacttgtc atgatgcgcc agcacacgcg cgtgatcgga tggctgctgg
    17341 cggtgctggc gatggccggt ttcagcgcat tggggctgtg gcagctgcag cgcatgcatg
    17401 ccaaacaggc aatgttggat gcgcagggtc cagcagtggc acaggcattg ccgctggcgc
    17461 aggcactcgc ggcaaccggt gcgctgcacg gcgtggccga ccacggccgc ttcctgcccg
    17521 gcgtggtgct gctggacaac cagacccggc atggccgcgc cggagtgaag atctatcgcc
    17581 cgttccgcag tgacgacggc agtgtgctgc tggtcgatct cggttggcgc gcgttgccac
    17641 cggatcgcac cttgccggat gtgcctgcgc ccccctcccc ggtggcagtg cgcggactgc
    17701 tggcgccgcc gccgtcggcg gggctggcgt tggggccggc gttctccgcg acgggtgagg
    17761 ccgggcgctg gctggccagc cggctgcccg ccgaaggcct ggcccgcgcg ctggggctgc
    17821 aggcgctacc cgaccgcgtg ctgcgcctgg acccggcgct gccattcggc gatgagcgcg
    17881 acctggacct gctgccgaac acgctgccgc cgcagcgcca cctgggctac gccgtgcagt
    17941 ggttcgggct ggccctgacc gtgctggtgg tcgcgctggt gctggagcgg cgcaggag
//
LOCUS       DAOKIP010000067        17990 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.067,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000067 DAOKIP010000000
VERSION     DAOKIP010000067.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 17990)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17990)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17990
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.067"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(69..428)
                     /locus_tag="QEL58_001943"
     CDS             complement(69..428)
                     /locus_tag="QEL58_001943"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012478908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1428 domain-containing protein"
                     /protein_id="HDS1676421.1"
                     /translation="MSYIDGFVMAVPTANKEKFLAHARSGDVVFIEYGALRVVECWGD
                     DVPRGKTTDFFGAVKATPDETVVFSWIEWPDKATRDAGMQKMMEDPRLDPAKNPMPFD
                     GARMIFGGFVPIYELTP"
     gene            complement(520..2922)
                     /locus_tag="QEL58_001944"
     CDS             complement(520..2922)
                     /locus_tag="QEL58_001944"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014035686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HDS1676422.1"
                     /translation="MHLPDPLQKMVRATVLASAALFSSTPAHALQASDYQRAERVHDS
                     HLRGALRNASVLPNWLPDGRFWYEREDAQGRRQAVLVDPETARRQILFEPAALDTAVA
                     PFAANGPYLRLASVQAVDAGLRLRFNGEVPIDCQWPRWQCARAQDPLPPADALPSPVG
                     DAWLQVRDHNLWLHSPGTVARALTAGGEPGHGYGVLPDFALRGIPRRQGRMPMRPFAV
                     GWSPDGRYVAGIRYDERALLDYPYLESTPVDSARPRVHAVKLGVLGDAQQVRDSLYVV
                     DTRSGQQHDIALPEGWNTLSEAGVLGWEGGRLYAVIAHFGTPRRLRLVEIEAGSGAVR
                     TVLEEACDTRLQLNVYSYNRPAVAILPGQDTAVWFSQRDGRGHLYRVRLSDGKVLAQL
                     TRGPWVVRDLLGVDGAGGWAYFSAGGVDGGDPYVRGLYRVSLQGGPIQRLAADSNDHL
                     ADAGTGSLFGGRAPQALSPGAGYLVDTVSRLDQPPHTLLRASDDGREVMVLETADDSA
                     IVAAGWRPPRRERLLAADGRTPVFATVYLPRDYRDDGSFPVIDAMYGGAFISNAPVTY
                     AEAVSALNPVSRASLAELGFVVVSIDARGTGGRDKAFHDVSFLRAADVQLDDHVAALR
                     QLGERYPGIDLQRVGIYGHSFGGYSAARALLRYPAFYKVGVASAGSHNFQGMYGGALH
                     GMDRLFGGVLPATAMADGVPAPFAGLDNAALAGNLRGHLLLVYGELDENAPPALTLQL
                     AAALNKAQREYDLLYLARQDHELFRNDATYTHRMWDYFVRHLAGRQPPDTMLAPLPGG
                     PG"
     gene            3133..3705
                     /locus_tag="QEL58_001945"
     CDS             3133..3705
                     /locus_tag="QEL58_001945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006451122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ax21 family protein"
                     /protein_id="HDS1676423.1"
                     /translation="MKNSLIALALAAALPFTASAAENLSYNYAEANYAKIDNDAFKSD
                     GWGVKGSYGFLPNFHAFGEYSRQEFDHTNIKLDQWKIGAGYNVEIAPSTDFVARVAYQ
                     KLDQKHGLDFNGYSAEAGVRTAFGAHAEVYGLVGYEDYAKKHGVNPDGQWYGRLGGQV
                     KLNQNWGLNGELKMNRHGDKEYTVGPRFSW"
     gene            3905..4582
                     /locus_tag="QEL58_001946"
     CDS             3905..4582
                     /locus_tag="QEL58_001946"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDS1676424.1"
                     /translation="MPPALPPLLPDRPQRLALLDPHPVLRLGVEVLLRQQSGVQVRVS
                     LSSEAHLLQLLERSPTCVDLLLIDALPMGDLGDGLALLRRLSQRWPALPVLVLSAHCN
                     ASTVTTSMRAGARGFLSKSTAPDVLLHAIDVVARGGCFVPPELRAELNASRARSTPAP
                     VLAPLSRREREVLGLVLKGVSTGEMALRSGRSASTISSQKTSAYRKLGIRGDGDLFRF
                     RHLLDCG"
     gene            complement(4589..4978)
                     /locus_tag="QEL58_001947"
     CDS             complement(4589..4978)
                     /locus_tag="QEL58_001947"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010486915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676425.1"
                     /translation="MDAILTPVSIGELIDKITILEIKVERIDDAAKLANIHTELDGLL
                     PLLQQLLQAQPALAALKQQLKVINERMWDIQDQLRDKEAAQVFDDAFIQLARGVYGTN
                     GERVQVKNEINRVAGSALVEEKQYQGE"
     gene            5158..5856
                     /locus_tag="QEL58_001948"
     CDS             5158..5856
                     /locus_tag="QEL58_001948"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014035690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676426.1"
                     /translation="MNSKGTMAAMVAALAGLLAIGSAQAQVQVSGSAALTSDYVWRGS
                     SQSDGDPAVQAGAKAAIASGWYASVWGSNVSFRPDNGARSEFDLVAGWSGTLAPDWAL
                     DANLTRYVYPGTGRALDWTELNTTLTWKQRAWLQLAHSNDALAGGHRGTYAQLGVRVP
                     LHERVRLEAAVGQYWLATAQGPDYLHGQLSAVATLAPAWELRATVHDTDSAAKRLFPG
                     NAGGRWELALQGSF"
     gene            complement(5853..7094)
                     /locus_tag="QEL58_001949"
     CDS             complement(5853..7094)
                     /locus_tag="QEL58_001949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012509806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDS1676427.1"
                     /translation="MTAAGGHCAPRFLEHRVSPTLPPLHRWQVLLMSVATGVAVASNY
                     YAQPLLHTIADAFGVPFGQVGMVVTAAQLSYAAGLILLVPLGDLFERRRLIVVMSLLS
                     AGGLVISACAPSLTWLLVGTAITGLFSVVAQVLVPFAATLAAPEHRGRVVGTLMSGLL
                     LGILLARTVAGLLSSLGDWRLVYAIAAGTLVLTALALQRGLPRFHHSAGLGYFALLRS
                     IGVLFVQEPVLRQRTLLGACSFAMFAIFWTPLAFLLAQPPYEYSDATIGLFGLVGAAG
                     TLAAGLAGRMSDRGQTGRATAIALVLLLLSWLPLGLSAHSLLALLVGVVVLDLAAQLL
                     HVSNQNLIYALQPAARNRLNAGYMTGYFIGGSLGSLLSAQVYQRFGWTGVCVAGAAVA
                     VLALLLWLPGALRARQAAASN"
     gene            7145..8032
                     /locus_tag="QEL58_001950"
     CDS             7145..8032
                     /locus_tag="QEL58_001950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005407753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDS1676428.1"
                     /translation="MNLKQLEFAVALAEEGNFTRAAERCHVVQSALSHQIAYLEQELG
                     TPLFERLPRQVRPTAAGEALLVHARQVLASLRHLRADVAAVSGEVRGLLAIGQISSLT
                     DIDVVAMLAAFQQAHPQVEFQLRVEKSEVLIAQVQSRELDVALVGLAPSAALDGVCHR
                     MLQEEDLVAVLAPSHRLARRKRLPLAELQDEALVDFPRGTGARRQTDEAFAAAGLPHT
                     VRFEVNLMELVERFVRHGLAVGIVPALIADGFEGVVQIPLQPTPTRRVHLVWQRVPTP
                     AARAFVEAVLSRAGAGSGP"
     gene            complement(8001..8468)
                     /locus_tag="QEL58_001951"
     CDS             complement(8001..8468)
                     /locus_tag="QEL58_001951"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012509808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1456 family protein"
                     /protein_id="HDS1676429.1"
                     /translation="MINNDVLRSVRYSLDLGDHHVVTLCQMADPAFAVDTEQVKAWLR
                     REDEAGFEAMSDSALAHFLDGLIVHLRGRDESQPQRAVETRIDNNLVLKKLRVAFQLR
                     DVDLMEIFASAGFKASKSEVGALFRQPGHANYRRCLDQMLRNFLKGLSLRLRG"
     gene            8583..9335
                     /locus_tag="QEL58_001952"
     CDS             8583..9335
                     /locus_tag="QEL58_001952"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HDS1676430.1"
                     /translation="MTRTVLITGATSGFGAAAVHRFAQAGWKVIATGRRSERLQPLVE
                     RYGKDVVHAAAFDIRDPVAMEAALLALPPAFGEIDLLVNNAGLAQGTAPAQGARLSDW
                     TTMIDTNITALVTLTHRLLPQLVERKGAIINISSVAGVYPYPGGNAYGGTKAFVSQFS
                     LGLRSDLHGTGVRVTTIEPGMAETEFTVVRTHGDQAASDKLYTGANPMTAEDIAEQIF
                     WVATLPPHLNINRLELMPVSQSFAGFQVAREG"
     gene            complement(9461..10366)
                     /locus_tag="QEL58_001953"
     CDS             complement(9461..10366)
                     /locus_tag="QEL58_001953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014091287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPOR domain-containing protein"
                     /protein_id="HDS1676431.1"
                     /translation="MAARRGKSQARRNSGSQGTPGWVWLVAGVAIAAVVFLAAPNLFK
                     GEGDGFLRAGPQPNPNAQPAPVADADSDVGTQPAAQPATPKPAEAEKPAATQYDFYTL
                     LPGKEVEMSDAELAASARAEDQRRAKAEAQRAQAALEGKPVPPAAATAPAPATTASVA
                     STAQVTATNRPLPAPLSERPAAATPPASTPPASTSTAAATPAARAETAPAATSTPAAA
                     APAAVDNARYILQAGAFGASGDAEATKAKLAMMGLAARVESAQINGKTVYRVRMGPYG
                     SAGELSEAKQKLDGTGLQAMAIKAQ"
     gene            complement(10388..12076)
                     /locus_tag="QEL58_001954"
     CDS             complement(10388..12076)
                     /locus_tag="QEL58_001954"
                     /EC_number="6.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019300787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine--tRNA ligase"
                     /protein_id="HDS1676432.1"
                     /translation="MKNLLRALISQGIEALRANGTLPADSLPPDFVVERPKTRDHGDF
                     ATNAAMLLAKAARSNPRALAQALVEALPRSEDVSKVEIAGPGFINFHLAPAAYQREAA
                     SVIKEGHDYGRNLSGNGRTVGVEYVSANPTGPLHVGHGRAAAIGDCVARVLDANGWNA
                     KREFYYNDAGVQIENLALSTQARIKGIAPDQDGWPEGGYRGEYIADVARAYMAGASVD
                     LEGSTVVGAKDPDDMQAIRRFAVAYLRNEQNLDLAAFGVDFDIYFLESSLYADGKVAE
                     AVAKLQASGHTYEEGGALWLRSTDFGDDKDRVMRKSDGTFTYFVPDVAYHLSKWQRGY
                     ERAITELGADHHGSLARVRAGLQAMEVGIPQGWPEYVLHQMVTVMRGGEEVKLSKRAG
                     SYFTLRDLIEEAGRDATRWFLIARKPDSQLTFDIDLARQQSNDNPVFYVQYAHARVCS
                     LLRQAQEKGLVYEQGNGLANLGRLVDDASLLLMNEISRYPEVVEAAGVALEPHLVAQY
                     LRELAHAFHTWYHGTPVLVDDAADRNAKLTLACAARQVLANGLDLLGVSAPEKM"
     gene            complement(12191..12895)
                     /gene="radC"
                     /locus_tag="QEL58_001955"
     CDS             complement(12191..12895)
                     /gene="radC"
                     /locus_tag="QEL58_001955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005407759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadC"
                     /protein_id="HDS1676433.1"
                     /translation="MPIHDWPEQERPREKLIARGPAALSDAELLALFLGSGFGGRDAV
                     QTARDLLQAHGPLRTLLARPARELARLPGLGPARSCTLAAGLELAHRYLAAELEHGEA
                     VGNNPAAVGRYLQHRLRGQAREIFMALFLDNRHRLIACEELFHGTINAAPVYPREVVR
                     RALLHNAAAVILSHNHPSGDPEPSGADTRITDELQQALALVDVRLLDHFVVGEGRPVS
                     FAERGLLSPPQPRLFG"
     gene            complement(12966..13592)
                     /locus_tag="QEL58_001956"
     CDS             complement(12966..13592)
                     /locus_tag="QEL58_001956"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006387709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDS1676434.1"
                     /translation="MHPRIIIADDHPVVLHGIRIVLQAHLMQVVGSACDGAGLLQLLA
                     RHDCDVVLTDLSMPGDGPDGPELIDALRARHPGLPVVVLTGARHPGLLDGLLREGISG
                     LVDKCADFTELPQALNAALAGQVFVSQQLRHHLQARDLLFPREPAPLSAREQEVLDLL
                     AAGLNVNAVAERCGRSPKTISRQKAEAKRKLGLQNNQELFDYLKTRRE"
     gene            13793..15082
                     /gene="coaBC"
                     /locus_tag="QEL58_001957"
     CDS             13793..15082
                     /gene="coaBC"
                     /locus_tag="QEL58_001957"
                     /EC_number="4.1.1.36"
                     /EC_number="6.3.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014645667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphopantothenoylcysteine
                     decarboxylase/phosphopantothenate--cysteine ligase CoaBC"
                     /protein_id="HDS1676435.1"
                     /translation="MPSFAQEFQVADSPNASPAPARALEGQKLLLCVGGGIAAYKALE
                     LVRRLRDAGAQVQVAMTAGAQQFVTPLSFQALSGQPTRTTLWDSAAEQAMGHIELARW
                     ADRIVVAPGTADLLARLAQGHADDLVSTLCLASTAPLTICPAMNHRMWLHPATQANIA
                     LLRQRGAQVIGPVDGPLAEGESGPGRLAEPGDIVAALAANGGAAAPVAPPETRALQGL
                     RLLISAGPTYEDIDPVRYVGNRSSGKMGFALAAAAAAMGAQVVLVSGPVQLPTPPGVQ
                     RVDVRSAAQMRDAVLKSLPADIYIGAAAVSDYTPRQVAAQKLKKTADSQSLVIELVRT
                     PDILAEVAAQTQALKLVVGFAAETHDVEKYARGKLVDKRLDLVIANQVGISGGGFESD
                     NNAATAFWQDGEQVFPATSKRELAEQLLALIARRLQA"
     gene            15079..15552
                     /gene="dut"
                     /locus_tag="QEL58_001958"
     CDS             15079..15552
                     /gene="dut"
                     /locus_tag="QEL58_001958"
                     /EC_number="3.6.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005420510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dUTP diphosphatase"
                     /protein_id="HDS1676436.1"
                     /translation="MTQAFTSQPLQVKLLDPRFGDSWPLPAYATEASAGMDLRAALDT
                     ALTLQPGDTALVPSGLAIHIADPNLCAVILPRSGLGHRHGIVLGNGTGLIDADYQGPL
                     LISVWNRGRETFTIEPGDRIAQLVVVPIARVSLQVVDTFTDSVRGTGGFGHTGVR"
     gene            15565..17913
                     /locus_tag="QEL58_001959"
     CDS             15565..17913
                     /locus_tag="QEL58_001959"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017161151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomannomutase/phosphoglucomutase"
                     /protein_id="HDS1676437.1"
                     /translation="MSGIGEGQRGRSLGRSAPLLGVLLVLLAGWFGWSAVQQWRQEAN
                     GQALEHARDQAVQGLQDAAAGQLKQLQQQLKNERVQQALQAGDAAAAALAVRESWTGV
                     EQVDVLAADLANAYADPATFGYARLALLEAALADGKPRLRVVRDGGGNRLGLAAPVEL
                     GNLGPAVLYVRQPLLRLTSPLDQVSAPSTGFLGLRQGSHDLVTQGNAHLAESAEALAR
                     PVAGTPLRLVAAVPNVEPGPLGLGALASAIVALLLAFIAVLLVVGRGRLPKALPLPRR
                     AAAADADHGPTLSESLQMAPPPVATAAASEEGAPPPPPPVPAEELAAGIFRAYDIRGV
                     VGSELTPKTAALIGQAIGTAALEQGLREVVIGRDGRLSGPELAAGLAEGLRRAGCAVI
                     DIGLAPTPLVYYAAFHLRTGTCVAVTGSHNPPEYNGFKVVIGGETLSGDAITDLYQRI
                     IEGRLVQAAEPGDYQQRDVSADYIQRIADDVQLDRPLKVVADAGNGVAGALAPQLLEA
                     IGAEVIPLYCDVDGSFPNHHPDPSEPANLEDLVQTVKRFGADLGVAFDGDGDRLGVVT
                     GEGRIIYADHLLMLFAADVLMRNPGAMVIYDVKCTGKLSDHVLRNGGSPLMWKTGHSL
                     MKAKMRETDAELAGEMSGHFFFKERWFGFDDGLYAAARLLEILAQREETPNEVLGELP
                     EMVATPELKVPVADGTPHALVAMLVAAAQSPDNPYVGGRLSTIDGLRVDFPDGWGLVR
                     ASNTTPVLVLRFEGNDEAALERIQALFRSQLQPVLGDTPLGF"
BASE COUNT         2847 a         6083 c         6242 g         2818 t
ORIGIN      
        1 ccgcattggg cgccggccat gccgctgcca gcgatgacac ggacgcgcgc tgagcgcgcc
       61 cgctcgcttc agggcgtcag ttcgtagatc ggcacgaagc cgccgaagat catccgcgcg
      121 ccgtcgaacg gcatcggatt cttcgccgga tccagccgcg gatcttccat catcttctgc
      181 atgccggcgt cgcgggttgc cttgtccggc cattcgatcc aggaaaacac caccgtctca
      241 tccggcgtgg ccttcactgc gccgaagaag tcggtggtct tgccgcgtgg cacgtcgtca
      301 ccccagcact cgaccacgcg cagggcaccg tattcgatga acaccacgtc gccgctgcgc
      361 gcgtgggcga ggaacttctc cttgttggcg gtgggtaccg ccatgacgaa accatcgatg
      421 tagctcattg cctgcctccg gatggaccgt gccgcatgca cggccttcaa gtacccgacg
      481 aaccagggcg gcgtggatcg acaccctggc gatgcctgtt cagcccgggc caccgggcag
      541 cggcgccagc atcgtatccg gcggttgccg gccggccagg tggcgcacga agtagtccca
      601 catgcggtgc gtgtaggtag cgtcgttgcg gaacaactca tggtcctggc gggccaggta
      661 cagcaggtca tactcgcgct gggccttgtt cagggcggcg gccagctgca gggtcagcgc
      721 cggtggcgcg ttctcgtcca gttcgccata gaccagcagc agatgcccgc gcaggttgcc
      781 ggccagcgcg gcattgtcga gtccggcaaa cggcgccggc acgccatcgg ccatggccgt
      841 agccggcagc acgccgccga acagccggtc catgccgtgc agggcgccac catacatgcc
      901 ctggaaattg tggctgccgg ccgaggccac gcccaccttg tagaacgccg ggtagcgcag
      961 cagggcgcgc gccgcgctgt agccaccgaa cgaatgccca tagatgccga cccgctgcag
     1021 gtcgatgccc gggtagcgtt cgcccagctg gcgcagcgcc gccacatggt catccagctg
     1081 cacatcggcg gcgcgcagga agctgacgtc atggaatgcc ttgtcgcggc cgccggtacc
     1141 gcgcgcatcg atgctgacca ccacgaagcc aagctcggcc aggctggccc gtgacaccgg
     1201 attcaatgcg gacaccgctt cggcgtaggt caccggcgca ttgctgatga aggcgccgcc
     1261 gtacatcgcg tcgatcaccg ggaagctgcc atcatcgcga tagtcacggg gcaggtagac
     1321 ggtggcgaag accggcgtgc gcccgtcggc ggcgagcagc cgttcgcgcc gtggtggtcg
     1381 ccagcctgcc gcaacgatcg cgctgtcatc ggctgtttcc agcaccatca cttcacggcc
     1441 gtcatcgctg gcccgcagca gggtgtgtgg tggctggtcg agacgggaaa ccgtatccac
     1501 cagatagcca gcgccaggcg acagtgcctg gggcgcgcgt ccgccgaaca gcgagccggt
     1561 gccggcatcg gccaggtggt cgttgctatc ggcggccagg cgctggatcg gcccgccctg
     1621 cagcgatacc cggtacaggc cgcgcacgta agggtcgcca ccgtccacgc cgccggcact
     1681 gaagtaggcc caaccgcctg cgccgtccac gcccagcagg tcgcgtacca cccaggggcc
     1741 acgggtcagc tgggccagca ccttgccgtc ggacagccgc acccggtaca ggtggccgcg
     1801 gccgtcgcgc tgcgagaacc acacggcggt gtcctgcccg ggcaggatcg ccacggccgg
     1861 tcggttgtac gaatacacgt tgagctgcag gcgggtgtcg caggcttcct ccagtacggt
     1921 gcgcactgca ccgctgccgg cttcgatctc caccaggcgc aggcgccgtg gcgtcccgaa
     1981 gtgcgcgatc accgcgtaca accggccgcc ctcccagccc agcacgccgg cttcgctgag
     2041 cgtgttccag ccctcgggca gcgcgatgtc gtgctgttga ccgctgcggg tatccaccac
     2101 gtacaggctg tcgcgcacct gctgcgcatc acccagcacg cccagcttca ccgcatgcac
     2161 gcgcgggcgc gcgctgtcga cgggcgtgct ttccagatag ggatagtcca gcagggcacg
     2221 ctcgtcatag cggatgccgg ccacgtagcg tccatccggt gaccagccga ccgcgaacgg
     2281 ccgcatcggc atccggccct gccggcgcgg aatgccacgc agggcgaagt ccggcagcac
     2341 gccatagcca tggccgggtt caccgccagc cgtcagcgcg cgtgccacgg ttccaggcga
     2401 atgcagccat agattgtggt cgcgcacctg cagccatgca tcgccaacgg gcgaaggcag
     2461 tgcgtcggcc ggcggcaacg gatcctgcgc gcgcgcgcat tgccagcgtg gccactggca
     2521 atcgatcggc acctcaccgt tgaaacgcag gcgcaggcca gcgtccaccg cctgcacgct
     2581 ggccaggcgc aggtatggcc cgttggcagc gaagggggcc accgccgtgt ccagcgcggc
     2641 gggctcgaac aggatctggc gacgggccgt ttccggatcg accagcacgg cctggcgccg
     2701 gccctgcgcg tcttcgcgct cgtaccagaa gcgcccgtcg ggcagccagt tcggcagcac
     2761 cgacgcattg cgcagtgcac cgcgcagatg actgtcgtgc acgcgttcgg cgcgttggta
     2821 gtcgctggcc tgcaatgcat gtgcaggcgt ggaagaaaac agcgcagcgc tggccagtac
     2881 ggtcgcgcgg accatcttct gaagcgggtc gggcaggtgc aaggcaacct cctgttgcaa
     2941 tcgtcgaggg atcacaaatg cacgcgcggc gcgcgcgtat gccagagaga gcctgaatca
     3001 aggcaaaaaa ttcagcaatg cgaagaccgc tgttttcagg gagcgttgtg gcgaataacg
     3061 gagaatttac attcccgatg cgatggcgcc ctggcgctgc tgcacaccat aagaaagtaa
     3121 aggtgtaccc ccatgaagaa ttcgctgatt gctctggccc tggccgctgc cctgccgttc
     3181 accgcttcgg ccgctgagaa cctgtcctac aactacgccg aagccaacta cgccaagatc
     3241 gacaacgatg cgttcaagtc cgacggttgg ggcgtgaagg gttcttacgg cttcctgccg
     3301 aacttccacg ccttcggtga gtacagccgc caggagttcg accacaccaa catcaagctg
     3361 gaccagtgga agatcggtgc cggctacaac gttgaaatcg ctccgtcgac cgacttcgtt
     3421 gcccgcgttg cctaccagaa gctcgaccag aagcacggtc tggacttcaa cggctacagc
     3481 gctgaagccg gtgtccgcac tgccttcggc gcccacgccg aagtctacgg cctggtcggc
     3541 tacgaagatt acgccaagaa gcacggcgtc aatccggatg gccagtggta cggccgcctg
     3601 ggtggtcagg tcaagctgaa ccagaactgg ggcctgaacg gcgagctgaa gatgaaccgt
     3661 cacggcgaca aggaatacac cgtcggcccg cgcttcagct ggtaattgct gccccggcgc
     3721 gatcgcgcgc tggaaaagct tcaacaggcc cggcttctgc cgggcctgtt gcgtttgcga
     3781 aggcgcaaaa ccgaatgcca tctgactgat gggtcacgca ggcgtggcat tgcaaggaat
     3841 tggattccgc cgctgcgggc tccgttctac cgtggctgtc ccatgttgct ggacatgccc
     3901 ccccatgccg cccgcacttc cacccctgct tcccgaccgg ccccaacgcc tggcattgct
     3961 ggacccgcat ccggtattgc gattgggcgt ggaagtgctg ttgcgacagc agagtggcgt
     4021 gcaggtccgg gtgagcctgt ccagcgaggc gcatctgctg cagctgctgg agcgcagccc
     4081 gacctgtgtg gacctgctgc tgatcgacgc gctgccgatg ggcgatctgg gcgatggatt
     4141 ggccctgctg cgccgcttgt cgcaacgctg gccggcgctg ccggtgctgg tgttgtcggc
     4201 acactgcaac gccagcacgg tgaccaccag catgcgtgcc ggcgcgcgtg gcttcctgtc
     4261 caagtcgacc gcgccggatg tgttgctgca cgcgatcgac gtggtggccc gcggaggatg
     4321 cttcgtgcca ccggagctgc gtgcggaact gaacgcatcg cgggcgcgca gcacgccggc
     4381 gccggtgctg gcgccgttga gccgacgcga gcgcgaagtg cttggcctgg tgctgaaagg
     4441 ggtcagcacc ggcgagatgg cgctgcgatc ggggcgttcg gccagcacga tcagctcgca
     4501 gaaaacctcg gcctaccgca agctcggcat ccgcggcgac ggcgacctgt tccgcttccg
     4561 ccacctgctc gattgcggat gagcgggctt attcgccctg gtactgcttc tcttccacca
     4621 gcgccgagcc ggccacgcgg ttgatttcgt tcttcacctg cacgcgttcg ccgttggtgc
     4681 catagacgcc acgcgccagc tggatgaacg catcgtcgaa cacctgggcc gcttccttgt
     4741 cgcgcagctg gtcctggatg tcccacatgc gctcgttgat caccttcagc tgctgcttca
     4801 gcgcggccag cgccggctgt gcctgcagca gctgctgcag cagcggcaac aggccatcca
     4861 gctcggtatg gatgttggcc agcttggcgg catcgtcgat gcgctcgacc ttgatctcga
     4921 gaatggtgat cttgtcgatc agctcgccga tcgataccgg ggtcaggatg gcgtccacgt
     4981 ggttggttcc tggtaacagg ccagcatgat aacgcgccca tgccgatgcg ccgctcctcc
     5041 acgggattta cgccgaattt gcgctgcggg cggggcaacg ccctcgatcc gttacggccc
     5101 ggcccccgac actgccgtcc cggcggcacg accgccttcg acgaggaaaa cagtgcagtg
     5161 aacagcaagg ggacgatggc ggccatggtg gccgccctgg cagggctgct cgcaatcggc
     5221 agtgcgcagg cccaggtaca ggtcagtggc agcgcggcgt tgaccagcga ctacgtgtgg
     5281 cgtggcagct cgcagagcga cggtgacccg gcggtgcagg ccggtgcgaa agcagccatc
     5341 gcatcgggct ggtacgccag cgtgtggggc tcgaacgttt cgttcaggcc ggacaatggc
     5401 gcgcgcagcg agttcgacct ggtggcgggc tggtccggca cgctcgcgcc ggactgggcg
     5461 ctggatgcca acctgacccg ctatgtgtac ccgggcaccg gtcgcgcgct ggactggacc
     5521 gaactcaaca ccacgctgac ctggaagcag cgcgcctggc tgcagctcgc acactccaac
     5581 gacgcgctgg ccggcggcca tcgcggcacc tatgcccagc tgggcgtacg ggtgccgctg
     5641 cacgagcggg tccgcctgga agcggcggtg ggccagtact ggctggccac cgcgcagggg
     5701 ccggattacc tgcatggcca gctcagtgcg gttgccacgc tggcgccggc atgggaactg
     5761 cgcgccaccg tgcacgacac cgacagtgcg gccaagcgcc tgttcccggg caatgccggt
     5821 ggacgctggg agctggcgct gcagggcagc ttctagttcg acgccgcagc ctggcgcgcg
     5881 cgcagcgcgc cgggcagcca cagcagcagg gccagcaccg ccaccgcggc accagccaca
     5941 cagacaccgg tccagccgaa gcgctggtag acctgcgccg acagcagcga gcccagcgaa
     6001 ccgccgatga agtagccggt catgtagccg gcattgagcc ggttgcgtgc agcaggctgc
     6061 aatgcataga tcaggttctg gttgctgacg tgcagcagct gcgcggccag gtccagcacc
     6121 accacgccca ccagcagcgc cagcagcgaa tgtgcagaca gccccagcgg cagccatgac
     6181 agcagcaaca gcaccagtgc gatggcggtg gcgcggccgg tctgcccgcg gtcggacatg
     6241 cgcccggcca ggccagcggc cagcgtgccg gcggcaccga ccagtccgaa caggccgatg
     6301 gtggcatcgc tgtattcata cggcggttgt gccagcagga aggcgagcgg ggtccagaag
     6361 atcgcgaaca tggcgaagct gcaggcaccg agcagggtgc gctggcgcag cactggctcc
     6421 tgtacgaaca gcacgccgat cgagcgcagc agcgcgaagt agcccaggcc ggcgctgtga
     6481 tggaaacgcg gcagcccgcg ctgaagcgcc agcgcggtca gcaccagcgt gccggcggcg
     6541 atcgcgtaca ccaggcgcca gtcgcccagg ctggaaagca ggccggccac ggtgcgtgcc
     6601 agcaggatgc ccagcagcag gccactcatc agcgtgccga ccaccctgcc ccgatgctcc
     6661 ggcgcggcca gcgtggcggc gaacggcacc agcacctgcg ccaccaccga gaacaggccg
     6721 gtgatcgcgg tgcccaccag cagccaggtc agcgacggtg cgcaggcgct gatcaccagg
     6781 ccgcccgccg acagcaggct catcaccacg atcaggcggc ggcgttcgaa caggtctccc
     6841 agcggcacca gcaggatcag cccggcggca taactcagct gcgcagcggt gaccaccatg
     6901 ccgacctggc cgaacggcac gccgaaggca tcggcgatgg tgtgcagcag tggctgcgcg
     6961 tagtagttgc tggccaccgc gacaccggtg gcgaccgaca tcagcagcac ctgccagcga
     7021 tgcagtgggg ggagagtggg gctcacgcga tgttccagaa agcggggtgc acagtgtccg
     7081 cctgctgcag tcatgatgga aatgaatcat catcatccct gtcatctgga attgagatgg
     7141 ttgcgtgaat ctcaagcagc tcgaattcgc cgtggccctg gccgaggagg gcaacttcac
     7201 ccgtgccgcc gagcgctgcc acgtggtgca gtccgcgctc agccaccaga ttgcctacct
     7261 ggagcaggaa ctgggcacgc cgctgttcga gcgcctgccg cgccaggtac gcccgaccgc
     7321 cgcgggtgag gcgctgctgg tgcacgcgcg ccaggtgctg gccagcctgc gccacctgcg
     7381 cgccgacgtg gccgccgtca gcggtgaagt acgcgggctg ctggcgatcg gtcagatttc
     7441 gtcgctcacc gacatcgacg tggtggcgat gctggccgcc ttccagcagg cgcacccgca
     7501 ggtggagttc cagctgcggg tagagaaaag tgaagtgctg atcgcgcagg tacagtcgcg
     7561 cgagctggat gtggcactgg tcgggttggc gccgtcggcg gccctggacg gcgtctgcca
     7621 ccgcatgctg caggaggagg atctggtggc ggtgctggcg ccgtcgcacc ggctggccag
     7681 gcgcaagcgg ctgcccctgg ccgaactgca ggatgaggcg ctggtcgact tcccgcgcgg
     7741 taccggcgca cgccggcaga ccgatgaggc gttcgctgct gcgggactgc cgcacacggt
     7801 gcgcttcgag gtcaacctga tggaactggt cgagcgtttc gtccgccacg ggttggcggt
     7861 cggcatcgtg ccggcgttga tcgccgacgg tttcgagggc gtggtgcaga ttccgctgca
     7921 acccaccccg acccgccgcg tacatctggt ctggcagcgg gtgccgacgc cggcggcgcg
     7981 cgcgttcgtc gaggccgtgc tcagccgcgc aggcgcaggc tcaggccctt gaggaaattg
     8041 cgcagcatct ggtccaggca gcgccggtag ttggcgtggc cgggctggcg gaacagtgcg
     8101 ccgacttccg acttggacgc cttgaaaccg gcgctggcga agatctccat caggtccacg
     8161 tcacgcagct ggaaggccac ccgcagcttc ttcagcacca ggttgttgtc gatgcgggtt
     8221 tccaccgcac gctgcggctg gctctcgtcg cggccgcgca ggtgcacgat caggccatcg
     8281 agaaagtgcg ccagcgcgct gtcgctcatt gcttcgaagc cggcttcgtc ctcgcggcgc
     8341 aaccaggcct tgacctgctc ggtatccacg gcgaacgccg gatcggccat ctggcacagg
     8401 gtcaccacgt ggtggtcgcc caggtccagg gagtagcgca cgctgcgcag gacatcgttg
     8461 ttgatcatgg cgcaattgta ccggtcaccc cgacaggtgg ggccggatct ggccgatccg
     8521 gcaacgcaag ccccggccga cggtgccaga atgggggtct ggttccccac ggagttgcct
     8581 gcatgacccg caccgtcctg attaccggcg ccacctccgg cttcggcgcc gccgccgtcc
     8641 accgcttcgc gcaggctgga tggaaggtga tcgccaccgg ccgtcgcagc gagcgcctgc
     8701 agccgctggt cgagcgctat ggcaaggacg tggtgcatgc cgccgccttc gacatccgcg
     8761 atccggtggc gatggaagcg gccctgctgg cgttgccgcc cgcgttcggc gagatcgatc
     8821 tgctggtcaa caacgccggc ctggcgcagg gcaccgcgcc ggcgcagggc gccaggctgt
     8881 cggactggac cacgatgatc gacaccaaca tcaccgcact ggtgaccctg acccatcgcc
     8941 tgctgccgca gctggtggag cgcaagggcg cgatcatcaa catctcgtcg gtggccggcg
     9001 tctatccgta tcccggtggc aatgcctacg gcggtaccaa ggccttcgtc agccagttct
     9061 cgctgggcct gcgttcggac ctgcacggca ccggcgtgcg ggtgactacg atcgaaccgg
     9121 gcatggccga aaccgagttc accgtggtgc gtacccatgg cgaccaggct gcctcggaca
     9181 agctttacac cggcgccaac ccgatgaccg ccgaggacat cgccgaacag atcttctggg
     9241 tggccacgct gccgccgcac ctgaacatca atcgcctgga actgatgccg gtcagccaat
     9301 cgttcgccgg cttccaggtg gcccgcgaag gctgaagccc ttgtagagtc gagcttgctc
     9361 gactgctctt ctgttgttga acgacagaag agcacggctc gacactgcag gaacaaaaaa
     9421 gccgggcaat gcccggcttt ttccgttcag gcccgaaggg tcactgtgcc ttgatcgcca
     9481 tcgcctgcag accggtgcca tccagcttct gcttggcctc ggacagctcg ccggcgctgc
     9541 catacggccc catgcgcacg cggtacacgg tcttgccgtt gatctgcgcc gactccacgc
     9601 gtgcggccag gcccatcatc gccagcttgg ccttggtcgc ttcggcatcg ccggaagcac
     9661 cgaacgcgcc ggcctgcagg atgtagcgag cgttgtccac ggcggccggt gcggcagcgg
     9721 ccggagtgct ggttgctgcc ggtgcggttt ccgcgcgcgc ggccggcgtg gcagcggcgg
     9781 tgctggtcga tgccggcggc gtgctggccg gcggcgttgc ggcggccgga cgctcgctca
     9841 gcggagccgg cagcggacgg ttggtggcgg tcacctgcgc ggtgctggcg acgctggcgg
     9901 tcgttgccgg tgcaggtgcg gtggccgcag ccggcggtac cggcttgcct tccagtgcgg
     9961 cctgcgcgcg ctgcgcctcg gccttggccc ggcgctggtc ctcggcgcgc gcgctggcgg
    10021 ccagttcggc gtcggacatt tcaacttcct tgcccggcag cagggtgtag aagtcgtact
    10081 gggtggcggc cggtttttcc gcttcggccg gcttcggcgt ggcgggctgc gcggccggct
    10141 gggtaccgac atcgctgtcg gcatcggcga ccggggccgg ctgcgcgttc gggttcggct
    10201 gtgggccggc gcgaaggaaa ccatcgcctt cgcccttgaa caggttcggc gccgccagga
    10261 acaccactgc agcaatggcc acaccggcga ccagccacac ccatccgggt gtgccctggc
    10321 tgccgctgtt gcgtcgtgcc tggcttttgc cgcgtcgtgc tgccatgagt actgcgtctc
    10381 ctgatgctta cattttttcc ggggcgctga cgcccaggag gtcgaggccg ttggccagca
    10441 cctggcgtgc cgcgcaggcc agggtcagct tggcattgcg atcggcggcg tcatccacca
    10501 gtaccggcgt cccgtgatac cacgtgtgga acgcatgcgc caattcacgc aggtactgcg
    10561 ctaccagatg cggttccagc gccacgccgg ccgcttccac cacttccgga taccgcgaga
    10621 tctcgttcat cagcagcagc gaggcgtcgt cgaccaggcg gccgagattg gccaggccgt
    10681 tgccctgctc gtacaccagg cccttttcct gcgcctggcg cagcaggctg cagacgcggg
    10741 catgcgcgta ctgcacgtag aacaccgggt tgtcgttgct ctgctggcgg gccaggtcga
    10801 tgtcgaaggt gagctgcgaa tcgggcttgc gcgcaatcag gaaccaacgg gtcgcgtcgc
    10861 ggccggcttc ttcgatcagg tcgcgcaggg tgaagtagct gcccgcacgc tttgacagct
    10921 tcacttcctc gccgccgcgc atcacggtga ccatctggtg cagcacgtat tccggccagc
    10981 cctgcgggat gccaacttcc atcgcctgca ggccggcgcg cacgcgcgcc agcgagccgt
    11041 ggtggtcggc gcccagttcg gtgatcgcac gctcgtagcc gcgctgccac ttggacaggt
    11101 ggtaggccac gtccggcacg aagtaggtga aggtgccgtc ggacttgcgc atcacgcggt
    11161 ccttgtcgtc accgaagtcg gtgctgcgca gccacagcgc gccgccttcc tcataggtgt
    11221 ggccggaggc ctgcagcttg gccaccgctt cggctacctt gccgtcggca tacagcgagc
    11281 tttccaggaa gtagatgtcg aagtcgacgc cgaacgcggc caggtccagg ttctgctcgt
    11341 tgcgcagata ggccacggcg aagcggcgga tcgcctgcat gtcatccggg tccttggcgc
    11401 cgaccacggt gctgccttcc agatcgacgc tggcgccggc catgtaggcg cgggccacgt
    11461 cggcgatgta ttcaccgcga tagccacctt ccggccagcc gtcctggtcc ggcgcgatgc
    11521 ccttgatccg ggcctgggtg gacagcgcca ggttctcgat ctgcacgccg gcatcgttgt
    11581 agtagaactc gcgcttggcg ttccagccat tggcatcgag cacgcgggcc acgcagtcgc
    11641 cgatcgccgc ggcgcggccg tggccgacgt gcagcgggcc ggtcgggttg gccgacacgt
    11701 actccacgcc taccgtgcgg ccattgccgg acaggttgcg gccgtagtca tggccttcct
    11761 tgatcaccga cgcggcttcg cgctggtacg cggccggggc caggtggaag ttgatgaagc
    11821 cagggccggc gatctcgacc ttgctcacgt cctcgctgcg cggcagcgcc tcgaccagcg
    11881 cctgtgccag tgcgcgcgga ttgctgcgcg cggccttggc cagcagcatg gcggcgttgg
    11941 tggcgaagtc gccgtggtcg cgggtcttcg ggcgctcgac cacgaagtcc ggcggcaggg
    12001 agtcggcggg cagggtgcca ttggcgcgca aggcttcgat gccttggctg atcagggcgc
    12061 ggaggagatt tttcacgagg cctgctgtga gaatgagcgg cggaatcgcc cattttagcg
    12121 cagataccag tgaccacgct gaccaggaca tgcctgcggg gccggccggt ggcgccgggc
    12181 gggcgtgcgc tcagccgaac aagcggggct ggggcgggga cagcaggcct cgttcagcaa
    12241 acgaaacggg gcggccctcg cccactacga agtggtccag caggcgtacg tccaccagcg
    12301 ccagcgcctg ctgcagctca tcggtgatac gggtgtcggc cccggagggc tcaggatcgc
    12361 ccgagggatg gttgtggctc aggatcaccg ccgccgcgtt gtgcagcagg gcacgccgca
    12421 ccacttcacg cgggtagacc ggggcggcgt tgatggtgcc gtggaacagt tcctcgcagg
    12481 cgatcaggcg gtggcgattg tccaggaaca gggccatgaa gatctcgcgt gcctgtccgc
    12541 gcaggcggtg ctgcaggtag cggccgaccg cggcggggtt gttgccgacc gcctcgccgt
    12601 gctccagctc ggcggcaagg tagcggtggg ccagttccag cccggctgcc agcgtacagc
    12661 tgcgcgccgg gccaagcccg ggcaggcggg ccaactcgcg ggcggggcgg gcgagcagcg
    12721 tccgcaacgg accatgggcc tgcagcaggt cgcgcgcggt ctgcacggca tcgcggccac
    12781 cgaatccgga gccgaggaac agtgccagca gttcggcatc ggaaagtgcc gcaggcccgc
    12841 gtgcgatcag cttctcgcgg ggacgttcct gttcgggcca gtcgtggatg ggcatgcgcg
    12901 catcatcgcg ggcccagccg ccggctccca tcaggccacg ccgcggcccc gggtcggccg
    12961 atgcctcact cgcgccgggt cttcaggtag tcgaacagct cctggttgtt ctgcaggccc
    13021 agcttgcgct tggcttcggc cttctgccgg ctgatcgtct tcgggctgcg cccgcaacgc
    13081 tcggcgacgg cgttcacgtt gaggccggcc gcgagcagat ccagcacttc ctgctcgcgt
    13141 gccgacagcg gcgccggctc gcgtgggaac agcaggtcac gggcctgcag gtggtggcgc
    13201 agctgctggg agacgaacac ctgcccggcc agtgccgcgt tcagcgcctg cggcagttcg
    13261 gtgaaatcgg cgcatttgtc gaccaggccg ctgatgcctt cgcgcagcag gccgtcgagc
    13321 agcccgggat ggcgtgcgcc ggtcagcacc accaccggca ggccgggatg gcgagcgcgc
    13381 agcgcatcga tcagttccgg accatccggg ccgtcccccg gcatcgacag gtcggtcagc
    13441 accacgtcgc agtcgtggcg ggccagcagc tgcagcagcc cggcgccgtc gcaggcactg
    13501 ccgacgacct gcatcaggtg ggcctgcagc acgatgcgga tgccgtgcag gaccacggga
    13561 tggtcgtcgg cgatgatgat gcgcggatgc acgcggctcc tcggagatcg aacagacccc
    13621 tgcgcgcagc ggccaacgcc tgattctgca aaagggcagg gccacagagg tataggaaag
    13681 gtccgaaagc gttgccggtg aaccccgggt cgatgcggga ggactccatc tgctcatagc
    13741 tgtgcgctat gtgcgccatg caccgggaca ttaccggcca tcgggtaagc taatgccctc
    13801 gtttgcacag gaattccagg tggctgactc ccccaacgct tcccccgcgc cggcccgcgc
    13861 gctggaaggt cagaaactgc tgttgtgcgt gggaggcggg atcgcagcct acaaggccct
    13921 ggaactggtg cggcgcctgc gcgacgcggg ggcccaggtg caggtggcaa tgaccgccgg
    13981 tgcccagcag ttcgtcacgc cgctcagctt ccaggcgctg tccgggcagc cgacccgcac
    14041 cacgctgtgg gacagcgccg ccgaacaggc catgggccac atcgaactgg cccgctgggc
    14101 cgaccgcatc gtggtcgcgc ccggcaccgc cgatctgctg gcacggctgg cccagggcca
    14161 cgccgatgac ctggtcagca ccctgtgcct ggccagcacc gcgccgctga cgatctgccc
    14221 ggccatgaat caccgcatgt ggctgcatcc ggcgacccag gccaacatcg ccctgctgcg
    14281 ccagcgcggt gcgcaggtga tcggcccggt cgacggtccg ctggccgaag gcgaatccgg
    14341 ccccggccgg ctggccgagc cgggcgacat cgtcgccgcg ctggccgcca acggcggcgc
    14401 agcggccccc gtggcgccgc cggagacccg cgcgctgcag ggcctgcgcc tgctgatcag
    14461 tgccggcccc acctatgagg acatcgatcc ggtgcgctac gtgggcaacc gcagcagcgg
    14521 caagatgggc ttcgccctgg ccgccgcagc ggcggcgatg ggtgcgcagg tggtgctggt
    14581 cagcggcccg gtgcagctgc cgacgccgcc cggcgtgcag cgcgtcgacg tgcgttcggc
    14641 tgcgcagatg cgcgacgccg tgctgaaatc gctgccggcc gacatctata tcggtgccgc
    14701 cgcggtgtcc gattacacgc cgcgccaggt ggccgcgcag aagctgaaga agactgccga
    14761 cagccagtcg ctggtgatcg agctggtgcg cacgccggac atcctggccg aggtcgccgc
    14821 gcagacgcag gcgctgaagc tggtggtcgg cttcgccgcc gagacccacg acgtggagaa
    14881 atacgcgcgc ggcaagctgg tcgacaagcg cctggacctg gtgatcgcca accaggtcgg
    14941 catcagcggc ggcggcttcg agagcgacaa caatgccgcc actgccttct ggcaggacgg
    15001 tgaacaggta ttcccggcca cctccaagcg cgagctggcc gaacaactgc tggcgctgat
    15061 cgcgcggaga ctccaggcat gacccaggct ttcacttccc aaccgctgca ggtcaagctg
    15121 ctcgatccgc gcttcggcga cagctggccg ctgccggcct atgccaccga agccagcgcc
    15181 ggcatggacc tgcgcgcggc gctggatacc gcgctgaccc tgcagcccgg cgataccgcg
    15241 ctggtcccca gcggcctggc catccacatc gccgatccga acctgtgcgc ggtgatcctg
    15301 ccgcgttcgg ggctgggcca ccgccacggc atcgtgctcg gcaacggtac cggcctgatc
    15361 gacgccgact accaggggcc gctgctgatc agcgtctgga accgtggccg cgagaccttc
    15421 accatcgagc cgggcgatcg catcgctcag ctggtggtgg tgccgattgc ccgcgtcagc
    15481 ctgcaggtgg tggatacttt caccgacagc gtgcggggaa cgggtggatt cggccatacc
    15541 ggggtgcgtt gacaggggac atcgatgagc ggcatcgggg aaggacagcg gggacggtcg
    15601 ttgggacgca gcgcgccact actgggggtg ctgctggtcc tgctggccgg ctggttcgga
    15661 tggagcgcgg tgcagcaatg gcggcaggag gccaacggcc aggcgctgga acacgcgcgt
    15721 gaccaggccg tgcaggggct gcaggatgcc gccgctggcc agctgaagca gctgcagcag
    15781 cagttgaaga atgaacgcgt gcagcaggcc ctgcaggccg gcgatgccgc cgcggcagca
    15841 ctggccgtgc gcgagagctg gaccggcgtg gagcaggtgg acgtgctggc cgcggatctg
    15901 gccaacgcct acgccgaccc ggccaccttc ggctatgccc gattggcact gctggaagcc
    15961 gcactggccg acggcaagcc gcgcctgcgc gtggtccgcg acggcggtgg caaccgcctt
    16021 ggcctggcgg caccggtcga gctgggcaac ctgggcccgg ccgtgctcta tgtgcgccaa
    16081 ccgttgctgc gcctgacctc gccgctggac caggtgagtg cgccgtccac cggcttcctc
    16141 ggcctgcgcc agggctcgca cgatctggtg acgcagggca atgcgcatct ggctgagagc
    16201 gccgaggcgc tggcgcggcc ggtggccggc accccgctgc ggctggtggc cgcggtgccc
    16261 aatgtcgaac cgggtccgct gggactgggg gcgctggcca gtgccatcgt tgcgctgctg
    16321 ctggccttca tcgcggtgct gctggtggtc ggtcgtggcc gcctgccgaa ggcactgccg
    16381 ctgccgcgcc gcgccgcggc ggcggacgcc gatcatggtc cgacgctgag cgagagcctg
    16441 cagatggcac cgccgccggt ggccaccgcc gccgccagcg aggaaggcgc gcccccaccc
    16501 ccgccaccgg taccggccga ggaactggcg gccggcatct tccgtgccta cgacatccgt
    16561 ggcgtggtcg gcagcgagct gacgccgaag accgcggcgc tgatcggcca ggccatcggc
    16621 accgcggcac tggagcaggg tctgcgcgag gtggtgatcg gtcgcgacgg ccgcctgtcc
    16681 gggccggagc tggccgccgg cctggccgaa ggcctgcgcc gtgccggctg cgcggtgatc
    16741 gacatcggcc tggcaccgac cccgctggtg tactacgccg ccttccatct gcgtaccggc
    16801 acctgcgtgg cggtcaccgg cagccacaac ccgcccgagt acaacgggtt caaggtggtc
    16861 atcggcggcg agacgctgtc cggcgatgcc atcaccgatc tctaccagcg catcatcgag
    16921 ggccgcctgg tgcaggccgc cgaacctggc gattaccagc agcgcgatgt cagcgccgac
    16981 tacatccagc gcatcgccga tgacgtgcag ctggaccgcc cgttgaaggt ggtggccgac
    17041 gccggcaacg gcgtcgccgg cgcgctcgca ccgcagctgc tggaagcgat cggcgccgaa
    17101 gtgattccgc tgtactgcga tgtcgacggc agcttcccca accatcatcc cgaccccagc
    17161 gaaccggcca acctggaaga cctggtgcag acggtcaagc gcttcggcgc cgatcttggc
    17221 gtggcgttcg atggcgatgg cgaccggctg ggcgtggtca ccggcgaagg caggatcatc
    17281 tatgccgatc acctgctgat gctgttcgcg gccgacgtgc tgatgcgcaa cccgggcgcg
    17341 atggtgatct acgacgtgaa gtgcaccggc aagctgtccg accacgtgct gcgcaacggc
    17401 ggcagcccgc tgatgtggaa gaccgggcat tcgctgatga aggcgaagat gcgcgagacc
    17461 gatgccgaac tggccggcga gatgagcggc cacttcttct tcaaggagcg ctggttcggg
    17521 ttcgacgatg gtctgtacgc cgccgcgcgc ctgctggaga tcctggcgca gcgcgaggaa
    17581 acgccgaacg aggtactggg cgagctgccg gagatggtgg ctacgccgga actgaaggtg
    17641 ccggtggccg acggcacgcc gcatgcgctg gtggcgatgc tggtggcagc ggcgcaatcg
    17701 ccggacaacc cctatgtggg cggccgactg tcgaccatcg acggcctgcg cgtggacttc
    17761 cccgatggct ggggcttggt gcgtgcctcc aacaccacgc cggtgctggt gctgcgtttc
    17821 gagggcaacg acgaggccgc gctggaacgc atccaggcgt tgttccgcag tcagctgcaa
    17881 ccggtgctgg gcgacacccc gctggggttc tgagccgagg ccgggctgcg cccggcaccc
    17941 gcggtagtgc cggccgctgg ccggcaacct cagcgacaac ggcagaagct
//
LOCUS       DAOKIP010000068        17865 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.068,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000068 DAOKIP010000000
VERSION     DAOKIP010000068.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 17865)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17865)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17865
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.068"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            29..1249
                     /locus_tag="QEL58_001960"
     CDS             29..1249
                     /locus_tag="QEL58_001960"
                     /EC_number="2.7.7.72"
                     /EC_number="3.1.3.-"
                     /EC_number="3.1.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012512103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multifunctional CCA addition/repair protein"
                     /protein_id="HDS1676438.1"
                     /translation="MKIYLVGGAVRDRLLQRPAGDRDWVVVGATPTQMEAQGYTAVGR
                     DFPVFLHPQTGEEYALARTERKSGRGYRGFVVDADPAVTLEEDLQRRDFTINAIACDE
                     DTGALVDPYGGVRDLEQRVLRHVGPAFVEDPLRVLRAARFMARFAPLGFTVAPETMAL
                     MREVAASGELDALVPERVWQELRKALACKRPSAFLRTLHDAHALGPILPELEALYGVP
                     QRAEFHPEVDTGIHQEMVSDMAAKLAPGDDLVGFAALTHDLGKGLTPPDEWPRHIMHE
                     QRGLKPLKALCARLKIPTEHQQLAEAVCREHLNVHRIDELRDATVLELLGRCDALRRP
                     ERVARIALCCEADKRGRLGFEDADYPQGETLKRLHQAALSVQARDLDLSHLKGPAVGE
                     ALARARVKAIAAAR"
     gene            complement(1294..2007)
                     /locus_tag="QEL58_001961"
     CDS             complement(1294..2007)
                     /locus_tag="QEL58_001961"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676439.1"
                     /translation="MSDGKEALLEMESGVISGLKVQCVMENIFWREGDRVGMAATGAL
                     SAALGLSGSAAGLAMMSVEEMEEPITKVEFRIGEMDVEGLLWNWPFNEGDVVRVVGAR
                     NDEGRFFAISVLDEDRRIIVSYPHVSAGTLAHWFSVFKYSLVISIPWWGLVIAFYAWK
                     FYAPFHLLVQSYLVGVLVFCVIGYRVGRRFVSYAKLADSVFSTLGWKGARRMNLRRVT
                     KSKRQPGDHPALGDTYFRY"
     gene            complement(3236..3991)
                     /locus_tag="QEL58_001962"
     CDS             complement(3236..3991)
                     /locus_tag="QEL58_001962"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676440.1"
                     /translation="MSIELQVNPAEHGPLDTHAGIISDLKVQHVVQNVFWRRGDREGM
                     AATGSIAAAFGLSGPAASMAMMSAEEMEERVACVEFRLGAVKVKAVLWNWPFLEGDDV
                     RVVGRHEDDGNFFALSVLQEQSRLIVSYPHVSAGTWAHWMTVAKYSLMFSVPWCALVI
                     GFFWLVQLKDSIGRNEGGSVLVAQAYLVCVLLFCFIGYRMGRRFTRFAKMADAIFQTL
                     GWPNAKRINLRRITKQKRQPGDHLALGDTYFRY"
     gene            complement(3988..5178)
                     /locus_tag="QEL58_001963"
     CDS             complement(3988..5178)
                     /locus_tag="QEL58_001963"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676441.1"
                     /translation="MAAKSRQYELSVCLLRKLEAAQKEAAPSTASARILRDSGVDRFV
                     TTAGAYLLNRFPMKGIQDTVGNAMVRVVLLTRALMERDEAISLVAEELSSGQQGKRYF
                     LERIQFYRKKGSALPMQFALRDLELHHGALAMRKRWQAAAESSRNVVRLNSLTGVLEM
                     VNFIHLATKVDKDTRDYATLLASGMSLVAVYTSVHETVAREFYGAGSVSAIRMKVAGS
                     VLAGAGSFIGAAYSLSDAEQAYAYPNKMALLAHLAKALTLATVGSSQFLTALAYSSPV
                     IERSIGRNSLTLALRGLRAGLEAAATEGGNVIASQAMKRVGVWMLRLAGWEVALVLLG
                     IEIFVWAISPNDLEAWCMTNAFGKKGNKALGGNLLSSKSYVTSLEQQLAFEKAIGSVS
                     VRPQ"
     gene            complement(5218..5415)
                     /locus_tag="QEL58_001964"
     CDS             complement(5218..5415)
                     /locus_tag="QEL58_001964"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014503410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676442.1"
                     /translation="MSCISVSCFIGVRIGSRFTRYARMADAIFKSLGWVNGKYINLRR
                     ITKLNKSVDDHPALGDTYFRY"
     gene            complement(5964..7478)
                     /locus_tag="QEL58_001965"
     CDS             complement(5964..7478)
                     /locus_tag="QEL58_001965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676443.1"
                     /translation="MSVLVAWLRHDLLLATLEDFDGQSAAQGVWFEEIIADAIAVLGM
                     HEIGRTLLTELAGDLAVTGGSSLLWRVIAQNQDAARQELQQTLKAAEAGANTVLSAAG
                     ASWAAFVSGTAHLKTFISNYRKLEAAQKEAVPSTAGARILRDSGVDRFVTTAGAYLLN
                     RFPMKGIQDTVGNAMVRVVLLTRALMERDEAISLVAEELSSGQQGKRYFLERIQFYRK
                     KGSALPMQFALRDLELHHGALAMRKRWQAAAESSRNVVRLNSLTGVLEMVNFIHLATK
                     VDKDTRGYATLLASGMSLLAVYTSVHETVAKDFFGAGSVSAIRMKVAGSVLAGAGSFI
                     GAYYSYLDAEAADRQQELAADILLSTKAFVTASAGGAQFLTALAYSSPIIERSLGRNS
                     LTLGLRGMKAGLEAAAATEGGAVVASQAMKRLGVWILRLGGWQVALALLVIEVLIWAI
                     SPNDLEKWCMNNAFGTNAGLRKGERTFGGEPYSTPREQKQAFDKAIGSVTLRVR"
     gene            complement(7538..7735)
                     /locus_tag="QEL58_001966"
     CDS             complement(7538..7735)
                     /locus_tag="QEL58_001966"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014503410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676444.1"
                     /translation="MVGVLVFCLIGYRVGRRFVGFAKMADSVFSTLGWKGARRMNLRR
                     VTKRKRRPGDHPALGDTYFRY"
     gene            complement(8266..11079)
                     /locus_tag="QEL58_001967"
     CDS             complement(8266..11079)
                     /locus_tag="QEL58_001967"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012444487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676445.1"
                     /translation="MVDLPAVAATLPDETEKSACDVCRSTGLAILPVRYTVVPASCNV
                     SLGGLSPAHASDVDVSAAGYTYALRTLRQGLLYLYYEQGPYGPEYWECYAIAGNGTLW
                     RQPTAYSARAIAGGGLPSCGRSGHDPMRTEFITIQRPHVCGTVWLAYSQHPWTPATLD
                     RYGSDPALRAERMQSIEPARWITSARAEGDQAPLKDAAGLASIMEYRWLDNPSGDPPD
                     LPYSSALPGASNPDGALRNVRLHAHGTRYPWSRRDYPRSDGVDPRQQRFERLKQHSSN
                     GRIGSDRQEYPPMLLGLWDAVGVVHELSGYCNDLVACINQFKSERELEVSAVDQIEQI
                     SRLLELNGAVMAGNYAAQTVREVERQRRLGNPSLPSWDPKVKLSEEEKRELAREYERQ
                     FLPLYLKDAQDAWKNKYWPLIDEPRFTAFKRNMDAMTQQVLDRLGPKMSVLVAWLRQD
                     LLLATLEDFDGKSAAQGEWFEEIITEAIAVLGMHEIGRALLTELSHDIEVTGRKSLLW
                     RVIAKNDEESRKELQQTLTAAQVCANTILDVAGAGWAAFVAGTAHLKSYLALYRKLEA
                     AQKEAAPPTASARILRDSGVDRFVTTAGAYLLNRFPMKGIQDTAGNAMVRFVLLTRAL
                     MERDEAISLVAEELSSGQQGKRYFLERIQFYRTKGSALPMQFALRDLELHHGALAMRK
                     RWQAAAESSRNVVRLNSLTAVLEMVNFIHLATKVDKDTRDYATLLASGMSLVAVYTGV
                     HEAVAKEFFGAGSASAIRMKVAGSVMAGAGSFIGAYYSLDEADRTVRKGNYAHFTAHL
                     VKGGVTGAAGTAHFLTALAYSCPVIERTVGRNALTLGLRGLHAGLEVAAGREGGHIVA
                     SRAMKRVGVWILRLSGWEAALIMLAIEALIWAISPNELEKWCESNSFGKRPETKVGSS
                     YATAREQQLAFENALGAVSARVQ"
     gene            complement(11156..12094)
                     /locus_tag="QEL58_001968"
     CDS             complement(11156..12094)
                     /locus_tag="QEL58_001968"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676446.1"
                     /translation="MSVESLCEQLIGIDRSSAGQCHLLMQPAVERSEMGEAFDALLES
                     AGIQPIPIAIRQIPKNLWPFLIPLDLSKGMHSLLSGQAVEMAMAQRSASSLLAARPQR
                     ACAWVWTPLLTPQLARQLAERAVAHCPHAQGRKRWLRFYDPMVTDLFLQCSSRSQRAY
                     RFEGVTTWMFLDRWGEWAISNAVAPALRGDPAVSWPELESIGALNQAWIGALRAGTPP
                     DRATFAQVQCSVGEGRRCGVSSGTDLDLFATHALLIGPQFHRHPTVQTLLAQIAHGER
                     YGDLIRRIGDTEWQDIRIAASAHASAIKGDGAHDAR"
     gene            complement(12084..14840)
                     /locus_tag="QEL58_001969"
     CDS             complement(12084..14840)
                     /locus_tag="QEL58_001969"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014502424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system tip protein VgrG"
                     /protein_id="HDS1676447.1"
                     /translation="MDGSVPAPQWPALRSALAGPSHAQRFLRLYTSLGSDVLVAETLD
                     GVEQIDGMGFQWTITALSLDAGLSLAPLIGQGALLQLQQADASLRPLHGRITAAERLG
                     SNGGLARYRLRLQPWLAFLSQRVDSYVFHDKTVVEIVEDLFADYSGLAPAWRWSLGDA
                     SQYARRSLTTQYQESDLAFVQRLLAEEGIYYWFEHAGEPGGADFGTHTLVLADHSNDT
                     TELGRVRFHRRDESERSDSVQQWSTAHRWRPGKVERTTWDYRTLERRQASAEAGQGND
                     LGIVDRDTCGPYGWQDNARGQRRAQQHLDALRVRAHTIDGAGQWRALAPGARFGLSQH
                     PQVGEDAQFLCLSVLHQARNNLDADVFDALEQTLGPASVAVPALPDALSGLAYGQAPG
                     EVSTAFYDNRFVAIPAEVNYRPQTEDGHGAHLHPRPTITGTLSAIVVSDGDPLLSDRD
                     HRIKVQFPWQRGGNASSGLAHPGGDDNAPANGGAWTWVRVMTPWAGDNWGGVVLPRRG
                     QEVLVAFLEGDIDRPVVVGAVYNGRGQQDAQHNQINGGGATATGNAAAWFEGNDHAAV
                     YTGFKSQALADSQGGTGGYQQLRFDDTPGQGRAQLSTTQHETTLTLGHLKGGQDNVRE
                     GERGFGVELSTQAQGALRAGRGLLLTTEQGSPQMAAPQALSQLQESQQLLQQLAESAA
                     NQQAQLPGEPTELPVDTTLTELQETLRATYSGSAAGSIAGGDGEAPGWSAPVLLGSGV
                     AGVLSLTPADQVWVSGTHTTLASGVALNWMTQGSLTMAVAGGLVMYTAGVQPSGESPN
                     QERGIALHAAQGKVSARAHKNQMIVAAKTKVRIASTEADVQLSAPSKHLLATAAGAYI
                     RIEGDNIELGAPGKVEFKASQRDWVGPLISSEETDVPAGQFSGCEPHLNAAVCRQEGC
                     ADVG"
     gene            complement(15065..15499)
                     /locus_tag="QEL58_001970"
     CDS             complement(15065..15499)
                     /locus_tag="QEL58_001970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005411035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SseB family protein"
                     /protein_id="HDS1676448.1"
                     /translation="MDHDTPFEPLNDLEVRLLQAQDGTLTASQFLDGLLTSTAFVLLD
                     KAIGEDGAWDESISPLVLTSESGEPMFAVFTSPERAGLWHEQLPQFAHAMPIAVHALL
                     AGIGDGVGLVLNPGLDVGMEMIPDAVAQLKQRAAAITRGMAH"
     gene            complement(15549..15884)
                     /locus_tag="QEL58_001971"
     CDS             complement(15549..15884)
                     /locus_tag="QEL58_001971"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005411036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676449.1"
                     /translation="MILIGQQERVMIVGPTEAHHCLRCGTETDFAPQLRYKMARIDLL
                     FGFAYQRRYELACTRCEHGWLLDTKTMDQQLGGVPIPWRHRFGLPLMLVVVAGLALLG
                     WLWRHGFIG"
     gene            complement(15888..16922)
                     /locus_tag="QEL58_001972"
     CDS             complement(15888..16922)
                     /locus_tag="QEL58_001972"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008264815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HDS1676450.1"
                     /translation="MSLDLRVIAAALGALFCSSAQAAAPAVIDLPTAQAQAQLLDMLE
                     KESLYRDRVDWPAIRTRLKAAQNDPAQTRAVLQEATGRSSGGHGAWISAKQLQAKAER
                     LARANGAATAAPKATTAPAEVLDPRIGRVEIEGYGVMQGPTAHQQMMERAKRWQAIID
                     DQDNGSRCGWIVDLRGNTGGNMWPMLLGAAPLLRTTPGADEDVGSFAAADGPTRWQLT
                     PSSVRLGERVRVDLGGPGYLLKHPGAPVAVLTGPRTASSGEATVLAFRGRPQTRSFGQ
                     PTSGLSTANVMRPLVDGSALLLTTSVMQDRNGQGDGLKIEPDQRTDSDAATLAAAQQW
                     LLQQPACQAR"
     gene            17302..17733
                     /locus_tag="QEL58_001973"
     CDS             17302..17733
                     /locus_tag="QEL58_001973"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676451.1"
                     /translation="MNTPYPAYPRLHALLGDALPGLALPTPVAEALEDALCEGDGDAA
                     PSAFFARLRGIAQSHAADGQAWRERHLSESRGRELAEATRCLAAVSACGGVLLAAQSA
                     REMDDVAAQCPPQVEEGLLHAVVVLADHAGGLVAPGARAGS"
BASE COUNT         3495 a         5975 c         5048 g         3347 t
ORIGIN      
        1 tctgcgccga ccatgcgatc atcgccccat gaagatctat cttgtcggcg gcgccgtgcg
       61 cgaccgcctg ctgcagcgcc ctgccggcga ccgtgactgg gtggtggtcg gcgccacgcc
      121 cacgcagatg gaagcgcagg gctacaccgc cgtgggccgc gatttcccgg tattcctgca
      181 cccgcagacc ggtgaggaat acgcactggc acgcaccgag cgcaaatccg gccgcggcta
      241 tcgtggcttc gtggtcgacg ccgatccggc ggtgacgctg gaagaggacc tgcagcgccg
      301 cgacttcacc atcaacgcca ttgcctgcga cgaggacacc ggcgcgttgg tcgaccctta
      361 tggcggcgtg cgtgatcttg agcagcgcgt gttgcgccac gtcggccctg cgttcgtcga
      421 agatccgctg cgtgtgctgc gcgcggcacg cttcatggcg cgcttcgcac cgttgggttt
      481 caccgtcgcg ccggaaacca tggcgctgat gcgcgaggtg gccgccagcg gcgagctgga
      541 tgcattggta ccggagcgcg tgtggcagga actgcgtaag gcgctggcct gcaaacgccc
      601 gtccgccttc ctgcgcacgt tgcacgatgc gcatgcgctg ggcccgatcc tgcccgagct
      661 ggaagcactg tacggcgtgc cgcaacgcgc ggagttccac ccggaagtgg ataccggcat
      721 tcaccaggaa atggtcagcg acatggccgc gaaactggcg ccgggggatg acctggtcgg
      781 cttcgccgcg ctcacccacg acctcggcaa gggtctgacc ccgccggacg aatggccgcg
      841 ccacatcatg catgagcagc gtggcctgaa gccgctcaag gcgctgtgcg cgcgcctgaa
      901 gattcccacc gagcaccagc agctggccga agcggtctgc cgcgagcact tgaacgtgca
      961 ccgcatcgat gagctacgcg atgccaccgt gctggagttg ctgggccgct gcgatgcatt
     1021 gcgccggccc gagcgcgtgg cccgcatcgc gctgtgctgc gaggccgaca agcgcggccg
     1081 gctgggattt gaggatgccg actacccaca gggtgaaacg ctcaagcgcc tgcaccaagc
     1141 agcgctttcg gtacaggcgc gtgatctgga cctgagccac ctgaagggcc ctgcggtggg
     1201 cgaggcgctg gcgcgggcta gggtgaaggc gattgcggca gcgcgatagg aatgtgcggc
     1261 ttgctgggaa ggcgcggcgt cagtcgctga tggtcagtac ctgaaatagg tatcgcccaa
     1321 ggcggggtgg tcgcctggct gacgcttgct cttggtcact ctccgaagat tcattcgcct
     1381 cgcacctttc catccaagcg tagaaaaaac tgaatccgcc aatttggcgt aactgacaaa
     1441 cctacggcca actcgatacc caatcacaca gaagacaaga acccccacca aatatgactg
     1501 aaccaacagg tgaaatggcg catagaattt ccacgcatag aaagctatta ccaaccccca
     1561 ccacggaatt gagatcacaa gcgagtattt aaacactgag aaccaatgcg ccaacgtacc
     1621 agcactaaca tgcggatagg aaacaatgat ccttctatcc tcatcaagaa ctgagatagc
     1681 aaaaaacctt ccttcatcgt tccgtgcgcc gacaactcga acaacatcac cctcgttaaa
     1741 aggccaattc cagagaagcc cctccacatc catttcacca attctgaact caactttagt
     1801 aattggctct tccatttcct ccacagacat catcgccaag ccggcagccg aaccactgag
     1861 acctaatgcg gcggacagcg caccggtcgc agccattcct acgcgatcgc cctctcgcca
     1921 gaaaatattt tccatcacgc attgaacttt gagaccggag ataactccgc tctccatttc
     1981 aagtagagcc tctttgccgt cactcatttg cataccactc cttgagggac cgaatcgaaa
     2041 ccagaccagt agcgccccca cactgccaga ttgataacag ctagtatctg aagtaggtat
     2101 ccccaacgcc ggaactatcg ccctctcgcg cctgagcgaa cttcccagac ctgagattaa
     2161 tcttcgtggg atcgctccaa tccagcgcag tgaatacgcg gtctgccatc ctcgcaaatc
     2221 tagatagacg acgcccgatc ctccatccaa tcactccaaa aattgaggct ccggcaatgc
     2281 aggcgccaga aataacttcg aacttactat cggatttgac gtcccaaaca aagacagttg
     2341 cgagaacagc cgcccccccc caccaaacta ctgagatcgc caaggaaatc cagaagacac
     2401 gcagccagtg cgaggtactg cctgccgtaa catgaggata ggaaacgatc agcctctcat
     2461 cctcgtccaa tacagagatt gcaaagaatg ttccgtcggg ccatcgcttg cccaccactc
     2521 taacgctctg cccctgcctg aacggccagt tccacagcag agcagacacc gatagatctc
     2581 ccagcatgaa cctgactcgc accactggct ccgcccccct tcgcttgaca tcacggccat
     2641 gcctgctgat ggcccactca agccgagcgc tgctgcaact gcacccactg cggccatttg
     2701 ctctcgatcg tcagaacggg acagaacatc ctcgaacgca tgttcaacga aaagttctga
     2761 gatcacacca gcctctgtat ccagcggaat tttgctcgga acatccatgt aatgtgcgcc
     2821 tttcacgact gcgaccttgt agttactttc cctattgctt tgtcaaacgc gtcgttctgc
     2881 ttcagaacgg cctcctggag gttcctacta tcgctggccg agggaggagc tttactagct
     2941 gccctcccga atacgttgga ctcgcaccac ttctcgagat cgttcgggct gattaccccc
     3001 acggtcgctt caatcaaaag cagtgccaac gtaatctccc aaccgcccaa gcgcagtatc
     3061 caaccgccaa ggcgcttcat agcctgactg gacaagacga gttccccttc cctcgcggcc
     3121 gcagcctcta tcccggccct taacccacga agacccaaac tcaacttatt tcgccccaga
     3181 tgacgctcaa gaagacgtac tgtttactgg ggaagcatgg tgctagacgc tgccgtcagt
     3241 acctgaagta ggtatcgccc aaggcaagat gatcgcctgg ctgccgcttc tgcttggtga
     3301 tccgccgcag attgatccgc tttgcgttgg gccaaccaag cgtctggaat attgcatcag
     3361 ccatctttgc gaaccgagtg aaacgccgcc ccattctgta tccgatgaag cagaagagca
     3421 aaacgcagac caaataggct tgagctacca acacacttcc gccttcgttc ctgccaatac
     3481 tatctttaag ctgaaccagc caaaaaaatc cgataacaag tgcgcaccaa ggcaccgaga
     3541 acatcaggga atattttgcc accgtcatcc aatgagccca cgtgcccgca ctaacgtgcg
     3601 gataagacac aatcagccta ctctgttctt gcagaactga cagggcgaag aagtttccgt
     3661 cgtcctcatg tcgaccaacc actcggacat cgtcgccctc cagaaatggc cagttccaaa
     3721 gcactgcctt tactttgact gcgccgagcc gaaactcaac gcacgcaacc cgctcctcca
     3781 tttcctcagc ggacatcatc gccatacttg cggccggacc gctgagccca aacgctgccg
     3841 caatgctgcc agtcgccgcc atcccctcac ggtctcctct ccgccagaag acgttctgca
     3901 ctacatgctg aactttcaag tcagagatga tgccagcgtg agtatcgagc ggcccatgtt
     3961 cggcagggtt tacttggagt tcgatactca ctgcggcctc acggaaactg agccgatagc
     4021 cttttcaaaa gccagttgct gctctagtga agttacatag ctcttgctag acaagagatt
     4081 tcctcctaaa gccttgtttc ccttctttcc gaacgcattt gtcatgcacc acgcctccaa
     4141 gtcatttggg ctaatggccc atacaaatat ttcaatgccg agcagaacca atgcaacctc
     4201 ccatcctgcc aatcgcagca tccacacacc gactcgcttc atcgcctgcg atgcaatgac
     4261 attcccaccc tccgtggccg ccgcctcaag cccagccctc agtcctctca gcgccaaggt
     4321 caacgaattc cgcccaatac tgcgctcgat tacaggggat gagtaggcga gcgcggttag
     4381 gaattgagat gatccgaccg tcgccagcgt cagggccttg gcaagatgcg ctaagagcgc
     4441 catcttgttt ggatacgcat aggcttgttc cgcgtccgac aagctgtagg ctgccccaat
     4501 aaaactaccc gctcccgcca gcacactgcc ggcaaccttc atccgaatag cactgacact
     4561 acccgcccca tagaactccc tagctaccgt ttcatgcaca ctggtataca cagccacaag
     4621 cgacatgccg gacgccagta acgttgcgta gtcacgcgta tccttatcca ccttggttgc
     4681 cagatggatg aaattcacca tctccaacac gcccgtaagg gaattcaaac ggacgacatt
     4741 gcggctgctt tccgccgctg cctgccaacg cttgcgcatc gccagcgcgc catggtgcag
     4801 ctccagatct cgaagcgcga actgcatcgg cagtgcactc cccttcttgc gatagaactg
     4861 gatgcgctcc aggaaatagc gcttgccctg ctggccgctg ctcagctctt cggccaccag
     4921 gctgatcgcc tcgtcgcgct ccatcaatgc ccgcgtcagg agcacaacgc ggaccatggc
     4981 attgccgaca gtgtcctgga tgcccttcat cggaaatcga ttcagaaggt acgcacctgc
     5041 ggtagtgacg aagcgatcaa cgccactgtc gcgaaggatg cgggcactgg cggtggaggg
     5101 cgcagcctcc ttctgcgccg cctccaactt gcggagcagg caaactgaaa gctcatactg
     5161 acggcttttg gcagccataa cggacaacca ctcctggtta ccacaactca gttcaagtca
     5221 gtacctgaag tacgtatcac ccaaagcagg atggtcatcc acactcttat tcaacttcgt
     5281 gatacgcctt agatttatat atttaccatt gacccaacca agagatttga agattgcatc
     5341 agccatcctt gcataacgcg tgaagcgaga accaatccta accccaatga agcacgagac
     5401 agaaatgcaa ctaataaata tgtaaaaaaa tcttttcaga gaacaccagt cccagggacc
     5461 ttcattaatc gaaccaaagc cggcaaccag aacgtatagc gcagcacttg gcagtgagaa
     5521 catcagcgtg tacttcatga caccgatcca atgtgcccaa cttccagagc tgacatgggg
     5581 gtatgacaca atcagccgct tattctcgtc cagaactgac agagcaaaga atttcccatc
     5641 ttcgcccctc tttccaacga cctttactcg gtccccttca ctgaatggcc agttccaaag
     5701 caacccttcc acttgggttt cgccaagccg gaactccact ctggtaactg gctcagccat
     5761 ttcctcagca gacatcatcg ccattccagc tgcagggcca ctcagcccca gtgcggcggc
     5821 aatggcgcct gtagccgcga tgcctgatgg atcaccctcc cgccagaata cattttccac
     5881 aacgtgcttg acccgcagat cggagatgat tccgatttcg atatcaagcg agttcttctc
     5941 tgacgacaca tcgacctcag ttttcatcgc accctcaacg taaccgagcc gatagccttg
     6001 tcaaacgcct gcttttgttc tcgcggtgtt gaatagggct cgccaccaaa tgttcgctca
     6061 ccttttctaa ggcccgcatt tgttccgaat gcattgttca tacaccactt ttccagatcg
     6121 ttcggactga tggcccatat caagacttca atgacaagaa gagccaatgc aacttgccag
     6181 ccacccaatc gcagaatcca cacaccaagt cgcttcattg cctgcgacgc aactacagcc
     6241 cccccttctg tcgccgctgc cgcttcaagc cctgctttca tccctctgag acccaaagtc
     6301 aatgaattgc gccccagact gcgctcgatg atcggagatg agtaggcgag tgcggtcagg
     6361 aactgcgctc cgcccgcaga cgccgtcacg aacgctttag tactcaaaag tatgtcggca
     6421 gcaagctctt gctgcctgtc cgcagcttcc gcgtctaaat agctgtagta cgccccaata
     6481 aaactacccg ctcccgccag cacactgccg gcaaccttca tccgaatggc actgacactg
     6541 cccgccccaa agaagtcctt ggctaccgtt tcatgcacac tggtatacac agccaaaagc
     6601 gacatgccgg acgccagtaa cgtcgcatag ccgcgcgtgt ccttatcgac cttggttgcc
     6661 agatggatga aattcaccat ctccaataca cccgtaaggg aattcaaacg gacgacattg
     6721 cggctgcttt ccgccgctgc ctgccaacgc ttgcgcatcg ccagcgcgcc atggtgcagc
     6781 tccaggtccc gaagcgcgaa ctgcatcggc agtgcactac ccttcttgcg atagaactgg
     6841 atgcgctcca ggaaatagcg cttgccctgt tggccgctgc tcagctcttc ggccaccagg
     6901 ctgatcgcct cgtcgcgctc catcaatgcc cgcgtcagga gcacgacgcg gaccatggca
     6961 ttgccgacag tgtcctggat gcccttcatc ggaaatcgat tcagaaggta cgcacctgcg
     7021 gtggtgacga agcgatcaac gccactgtca cgaaggatgc gggcaccggc ggtggatggc
     7081 actgcctcct tctgcgcagc ctccagcttg cgatagttgg agatgaaggt cttcagatgc
     7141 gccgttccgg acacaaaggc cgcccagctc gcacctgcgg cagacagaac ggtgttggct
     7201 ccggcctcag ccgccttgag cgtctgctgc agctcctgcc gggcagcgtc ctggttctgc
     7261 gcaatgactc gccacaacaa cgacgatcct ccggtcacag ccagatcgcc agccagctca
     7321 gtcaacaacg ttcggccgat ctcgtgcatg ccaagcaccg cgatggcgtc ggcgatgatc
     7381 tcctcgaacc acactccctg cgccgcagac tgaccatcaa agtcctccaa cgttgcgagc
     7441 agcagatcgt ggcggagcca ggcaaccagc accgacatct tcggtcccag acggtcgagt
     7501 acctgccggt catcgcccca acactgacaa acaccattca atatctgaaa taggtatcgc
     7561 ctagggcggg atggtcgccc ggccgtcgct tcctcttagt cactctacga agattcattc
     7621 gcctggcccc cttccaccca agcgtagaga aaactgaatc cgccattttg gcgaaaccta
     7681 caaacctacg accaactcga tatccaatca gacagaaaac aagaaccccc accaaatatg
     7741 actgaaccaa caggtgaaat ggcgcagaaa atttccactc atagaaggct attaccaatc
     7801 cccaccacgg aattgaaatc acaagcgaat atttaagcac cgaaatccag tgcgccaacg
     7861 tgccagcact aacatgcgga taggaaacaa tcagccttct attctcatca agaaccgaaa
     7921 tggcaaaaaa tcttccttcg tcgttccgtg caccgacaac tcgaacgatg tcaccctcgt
     7981 caaaaggcca gttccagaga agcccttcca cagccatttc accaagtctg aactcgactt
     8041 tggtaactgg ctcgtccatt tcctccgcag acatcatggc catgcctgcc gctggtccac
     8101 taaggcctag cgccgctgcg aatgcaccgg tggccgccat cccctcccga tccccctccc
     8161 gccagaacac attctttacg caatgctgaa ccctggggtc cacaattgtc ccaaccgcag
     8221 tttcaagcgg accgctgcta gtaggaccta cctgggttcc agtgatcatt gcaccctcgc
     8281 agacactgca ccgagagcgt tttcaaacgc caactgctgc tcccgcgctg ttgcataaga
     8341 acttccgacc ttagtctcag gcctttttcc gaaagagttt gactcacacc atttctccag
     8401 ttcgtttggg ctgatcgccc agatcagcgc ctcaattgcc agcataatca aagccgcctc
     8461 ccagccactc agtcgcagga tccacacgcc aacacgcttc atggctcgcg atgcgactat
     8521 atgtccgcct tcccttcctg cggcaacttc aagtccagca tgcaaccctc tcaggcctaa
     8581 agtcagtgca tttctcccaa cagtccgctc gatcaccggg caagaataag caagcgccgt
     8641 cagaaaatga gcagttccgg ctgctcctgt taccccgccc ttgaccaaat gcgccgtgaa
     8701 atgagcgtag tttccttttc tcacagtccg atcagcttcg tccaggctgt agtacgcccc
     8761 aataaaacta cccgcacccg ccatcacact tccggcaact ttcatccgta tggcactggc
     8821 gctacccgca ccaaaaaact ctttcgccac agcctcgtgc acaccggtat acacagccac
     8881 aagcgacatt ccagaggcca gtaacgtcgc gtagtcgcgt gtgtccttgt caaccttggt
     8941 tgccagatga atgaagttca ccatctccaa cacggccgta agggagttca ggcggacaac
     9001 attgcggctg ctttccgccg ctgcctgcca acgcttgcgc atcgccagcg cgccgtgatg
     9061 cagctccagg tcccgaagcg cgaactgcat cggcagcgcg ctgcccttgg ttctgtagaa
     9121 ctggatacgc tccaggaagt agcgcttgcc ttgctggcca ctgctcagtt cttcagccac
     9181 caggctgatg gcctcatcgc gctccatcaa cgcccgtgtc agaagcacga accggaccat
     9241 ggcattgccg gcggtgtcct ggatgccctt catcgggaat cgattcagaa ggtaggcacc
     9301 tgcggtagtg acgaagcgat caacgccact gtcgcgaagg atgcgggcac tggcggtggg
     9361 gggcgcggcc tccttctgcg ccgcctccaa cttgcggtaa agggccaagt aagacttcag
     9421 atgcgcggtg cctgcgacaa atgccgccca gcctgcgccg gccacatcga gaatcgtgtt
     9481 ggcgcacacc tgcgccgccg tgagtgtctg ctgcagctcc ttgcgagact cttcgtcgtt
     9541 cttcgcaatg actcgccaga gcagggattt tcttccggta acttctatat cgtgggacag
     9601 ttcagtcagc aacgcacggc ctatctcgtg cataccaagc acggcgatcg cctctgtgat
     9661 gatctcctcg aaccactcgc cttgcgccgc agacttgccg tcaaagtctt ccagcgtcgc
     9721 cagcagcaga tcttggcgga gccaggcaac cagcaccgac atcttcggtc ccagccggtc
     9781 gagtacttgt tgcgtcatcg cgtccatgtt tctcttgaac gcggtgaaac ggggctcgtc
     9841 aatcagcggc cagtacttgt ttttccacgc atcctgggcg tccttcagat agagcggcag
     9901 gaactggcgc tcatactccc gcgcgagttc ccgcttctcc tcctcggaga gctttacctt
     9961 ggggtcccat gagggaagcg agggattgcc gaggcggcgc tgccgctcca cctcgcggac
    10021 ggtctgtgct gcgtagttcc ctgccatcac cgcaccgttg agctccagca ggcgcgagat
    10081 ctgttcgatc tggtcaacag cgctgacttc cagttcgcgc tcgctcttga actggttgat
    10141 gcaggcgacc aggtcattgc agtaaccact gagctcgtgc acgacgccaa ccgcatccca
    10201 caagcccagc agcatgggcg ggtactcctg acgatcactg ccgatgcgcc cgttgctgct
    10261 gtgttgcttc aggcgctcaa accgctgctg gcgcgggtcg acaccgtcgc tacgagggta
    10321 atcccgccgc gaccaggggt aacgcgtgcc atgcgcgtgc agccgcacgt tgcgaagcgc
    10381 cccgtccgga ttagaggcac ccgggagtgc gctgctgtac ggaaggtctg gcggatcgcc
    10441 tgaggggtta tccagccatc gatattccat gatcgaggcc agcccggcgg catccttcaa
    10501 tggcgcttgg tcgccttctg ctctcgccga cgtgatccat ctggctggct cgatcgattg
    10561 catccgctcg gcgcgcaggg ccgggtcgga tccatagcga tccaacgtcg ctggcgtcca
    10621 ggggtgttgg gagtaggcca gccaaaccgt cccgcataca tgcgggcgct ggatggtgat
    10681 gaactccgtg cgcatcggat cgtggccact gcggccacag ctgggcaggc caccgcctgc
    10741 gatcgcgcgc gcactgtagg cggtgggttg ccgccacagg gtgccgtttc cggcgatggc
    10801 gtagcactcc cagtactccg gaccgtaggg accctgctcg tagtacaggt acagcagacc
    10861 ctggcgcaac gttctgagcg cgtaggtgta tcccgccgca ctgacatcaa cgtcgctggc
    10921 gtgtgcgggc gacaggccac caaggctcac gttgcagctg gcaggcacca ccgtgtagcg
    10981 caccggcagg atggccagcc cagtggagcg gcagacgtcg caggctgatt tctctgtctc
    11041 gtccggcagc gtggcggcaa ccgccggaag atcgacgatg tctggactgc ccgcgctgcg
    11101 gatcccgacg ttgctttcac ccgtgaaggg cccgctggag tcgtacctat ctttgctatc
    11161 gcgcgtcatg tgccccgtct cccttgatcg cacttgcgtg tgcggacgcc gcgatgcgga
    11221 tgtcctgcca ctccgtgtct ccaatccgtc gaatcagatc gccataccgc tcaccgtgcg
    11281 cgatctgcgc cagtagcgtc tggacagtgg gatgcctgtg gaactgaggc ccgatcaaga
    11341 gcgcatgcgt ggcgaacaga tccagatcag taccactgga gacaccacaa cggcgcccct
    11401 ctccgacact gcactgcacc tgcgcgaacg tggcgcgatc cggtggggtt ccggcccgca
    11461 gcgcgccgat ccacgcctgg ttcaatgcac caatggattc cagctcgggc caggacacgg
    11521 cagggtcacc gcgcagtgca ggcgcgacag cgttgctgat ggcccactct ccccaccgat
    11581 ccaggaacat ccacgtggtc acaccttcaa accgatacgc ccgttgcgag cgcgatgagc
    11641 actgcaggaa cagatccgtc accatcgggt cgtagaagcg cagccaccgc ttccggccct
    11701 gcgcatgcgg gcagtgcgcc accgcacgct cggcaagctg tctggccagc tgtggtgtca
    11761 gcaacggcgt ccatacccac gcacacgcac gctgtgggcg cgcagccagc agcgacgatg
    11821 ccgagcgctg tgccatcgcc atttccaccg cctgaccaga caacagggag tgcattcctt
    11881 tgctgaggtc gagcgggatc aggaacggcc acaggttttt tggtatctgt cgaatggcga
    11941 tcgggatcgg ttggattcca gccgattcca gcagcgcgtc aaaggcctcg cccatctcag
    12001 atcgctctac agctggctgc atcagcaggt ggcactgacc tgcgctgctg cgatcgatac
    12061 cgatcagctg ttcgcacaac gattcaaccg acatcagcgc acccttcctg tcggcatact
    12121 gctgcgttca agtgcggctc gcagccactg aactgcccag ctggaacgtc ggtctcctcc
    12181 gaactgatca gcggccccac ccaatcccgc tggctggcct tgaactccac cttccccggc
    12241 gcgcccagct cgatgttgtc gccctcgatg cgaatgtagg cccctgccgc cgtcgccagc
    12301 agatgcttgc tcggcgccga cagctgcacg tccgcttcgg tactggcgat gcgtaccttg
    12361 gtcttggccg ccacgatcat ctggttcttg tgcgcacgcg cgctcacctt gccttgcgcg
    12421 gcgtgcaacg cgatgccgcg ctcctggttc gggctttcac cgctgggctg cacgccggcg
    12481 gtgtacatca ccagaccgcc ggccaccgcc atcgtcagcg agccctgcgt catccagttc
    12541 agtgccacgc cactggccag cgtggtgtgg gtgccactga cccagacctg gtcggccggg
    12601 gtcaggctca gcacgccggc cacaccgctg cccagcagca cgggcgcgct ccagcccggt
    12661 gcctcgccat cgccgccggc gatgctgccg gcggcactgc cgctgtaggt ggcgcgcagc
    12721 gtctcctgca gctcggtcag ggtggtgtcc accggcagct cggtcggctc gccgggcagc
    12781 tgcgcctgct ggttggcggc cgattcggcc agctgctgca gcagctgctg gctttcctgc
    12841 agctggctca atgcctgcgg cgcggccatc tgcggcgagc cctgctcggt ggtcagcagc
    12901 aggccgcgtc cggcacgcag tgcgccctgt gcctgggtgg acagctccac gccaaagccg
    12961 cgctcaccct cgcgcacatt gtcctggccg cccttcagat gccccagggt cagcgtggtc
    13021 tcgtgctggg tggtggacag ctgcgcgcgg ccctgcccgg gcgtgtcgtc gaagcgcagc
    13081 tgctggtagc cgccggtgcc gccctggctg tcggccagcg cctggctctt gaaaccggtg
    13141 tacaccgccg cgtggtcatt gccctcgaac caggcggcgg cgttgccggt ggcggtggcg
    13201 cccccgccgt tgatctggtt gtgctgtgcg tcctgctggc cacggccgtt gtagaccgca
    13261 ccgaccacca ccgggcggtc gatatcgcct tccaggaacg ccaccagcac ttcctgccca
    13321 cgccgcggca gcaccacccc gccccagttg tcgccggccc acggggtcat cacccgcacc
    13381 caggtccagg cgcctccgtt ggccggtgcg ttgtcgtcgc cgccgggatg ggccaggccg
    13441 ctgctggcgt tgccgccgcg ctgccacggg aactgcacct tgatgcgatg gtcgcggtcg
    13501 gacagcaacg ggtcgccgtc gctgaccacg atcgcgctga gcgtgccggt gatggtcggc
    13561 cgcggatgca ggtgcgcgcc gtggccgtcc tcggtctgcg gccggtagtt cacttcggcc
    13621 gggatggcga cgaagcggtt gtcgtagaac gcggtggaca cctcgcccgg cgcctggcca
    13681 taggccagcc cggacagcgc gtccggcagc gccggcaccg ccacgctggc cggacccagg
    13741 gtctgttcca gtgcgtcgaa cacgtcggca tcgaggttgt tgcgcgcctg gtgcagcacc
    13801 gacaggcaca ggaactgtgc gtcctcgccc acctgcggat gctgcgacag gccgaagcgc
    13861 gcaccgggcg ccagtgcgcg ccattggccg gcgccgtcga tggtatgagc gcgcacgcgc
    13921 agcgcgtcca gatgctgctg cgcgcggcgc tggccgcgtg cgttgtcctg ccagccatag
    13981 gggccgcagg tatcacggtc gacaatgccc aggtcgttgc cctgcccggc ctcggcgctg
    14041 gcctggcgac gctccagggt gcggtagtcc caggtcgtac gctcgacctt gcccggccgc
    14101 cagcggtgcg ccgtggacca ctgctgcacg ctgtcgctgc gctcgctctc gtcgcggcga
    14161 tggaagcgca cgcggcccag ttcggtggtg tcgttgctgt ggtcggccag caccagggta
    14221 tgcgtgccga agtccgcgcc gccgggctcg ccggcatgct cgaaccagta atagatgccc
    14281 tcctcggcca gcagccgctg cacgaaggcc aggtcgcttt cctggtactg cgtggtcagg
    14341 ctgcgccgcg cgtactggct ggcgtcaccc agcgaccagc gccaggccgg tgccagcccg
    14401 ctgtagtcgg caaacaggtc ctcgacaatc tcgaccacgg tcttgtcgtg gaagacgtag
    14461 ctgtccaccc gctgcgacag gaacgccagc cacggctgca ggcgcagccg atagcgcgcc
    14521 aggccgccat tgctgcccag ccgctcggcg gcggtgatgc gaccgtgcaa cgggcgcagg
    14581 ctggcgtcgg cctgctgcag ctgcagcagc gcgccctgcc cgatcagcgg cgccagtgac
    14641 aggccggcat ccagcgacag tgcggtgatc gtccactgga aacccatgcc gtcgatctgc
    14701 tcgacgccat cgagggtttc ggccaccagc acatcgcttc ccagcgacgt gtacagccgc
    14761 aggaagcgct gggcgtgcga agggccggcc agcgcagagc gcagggcggg ccattgcgga
    14821 gcaggaacgg agccatccat ggagcaacgc gcgcagggcc aaggggccgt gagcgtgttg
    14881 ctgaaacagg agccgaggaa gagggaattg cgacacggca gacaggtcca ccgtgaaacg
    14941 caggcgctac ctaggtgtcg cgcccgctag gaaaactacg aaatgccgat cgcatgcaga
    15001 acaggagggc gttacccgcc aagtggccga cctgaaaaca gcagcgagcc agccaaggca
    15061 ggaatcaatg cgccatgcca cgcgtgatcg ccgcagcgcg ctgcttcagc tgggccacgg
    15121 catcgggaat catttccatg cccacgtcca ggcccgggtt cagcaccagg ccgacgccgt
    15181 cgccgatgcc ggccagcagc gcgtgcaccg cgatcggcat cgcatgggca aactgcggca
    15241 gctgctcgtg ccacaggccg gcgcgctcgg gcgaggtgaa caccgcgaac atcggttcgc
    15301 cactctcgct ggtcagcacc agcggcgaga tgctctcatc ccaggcgccg tcttcgccga
    15361 tggccttgtc cagcagcacg aacgccgtcg aggtcaacag gccatcgagg aactgcgatg
    15421 cggtcagcgt cccgtcctgg gcctgcagca ggcgcacctc gaggtcgttg aggggttcga
    15481 acggggtgtc gtggtccatg gtgggttccg gtacgtgatt gcagggcaga ctttaacagc
    15541 cccggcgttc aaccgatgaa tccgtgccgc cacagccagc ccagcagggc caggccagcc
    15601 acgaccacca gcatcagcgg caggccgaag cggtgccgcc acgggatcgg caccccaccc
    15661 agctgctggt ccatggtttt ggtgtccagt aaccagccgt gctcgcaccg ggtgcaggcc
    15721 agctcataac ggcgctggta ggcgaagccg aacagcaggt cgatgcgcgc catcttgtag
    15781 cgcagctgcg gcgcgaagtc ggtttccgtt ccgcaacgca ggcagtggtg ggcttccgta
    15841 ggaccgacga tcatcacccg ttcctgctgg ccgatcagga tcatggatca gcgcgcctgg
    15901 caggcgggct gctgcagcaa ccactgctgc gccgcagcca gcgtggcggc atcactgtcg
    15961 gtgcgctggt ctggttcgat cttcagccca tccccctggc cattgcgatc ctgcatcacg
    16021 ctggtggtca gcagcagtgc gctgccatcg accagcggcc gcatcacgtt ggcagtggac
    16081 agccccgagg tgggctggcc gaaactgcgc gtctgcgggc ggccgcggaa ggcaagcacg
    16141 gtcgcctcgc cggaactggc ggtgcgcggc ccggtcagca ccgccaccgg cgcgcctggg
    16201 tgtttcagca gataaccggg cccgccgagg tcgacccgca cgcgctcgcc aagccgcacg
    16261 ctggacggtg tcagctgcca gcgcgtgggg ccgtccgcgg cggcgaagga ccccacgtcc
    16321 tcgtcggcgc cgggcgtggt gcgcagcagt ggcgctgcgc ccagcagcat cggccacatg
    16381 ttgccgccgg tgttgccacg cagatcgaca atccagccgc agcggctgcc attgtcctgg
    16441 tcatcgatga tcgcctgcca gcgcttggca cgctccatca tctgctggtg cgccgtcggg
    16501 ccctgcatga caccgtagcc ctcgatctcc acccggccga tacgcgggtc cagtacttcg
    16561 gccggggccg tcgttgcttt cggagccgct gtcgctgcgc cattggcgcg tgccaggcgt
    16621 tctgccttcg cctgcagctg ctttgcgctg atccacgcgc catgcccgcc ggaactgcgg
    16681 ccggtggcct cctgcagcac cgcgcgggtc tgcgccggat cgttctgcgc cgccttcagg
    16741 cgcgtacgga tggccggcca gtccacgcgg tcgcggtaca gcgactcctt ctccagcatg
    16801 tccagcaact gggcctgcgc ctgtgctgtc ggcaggtcga tgacggccgg ggcggcagcc
    16861 tgcgcgctgc tgcagaacag ggcgcccagt gcagcagcga tcacgcgaag atcaagcgac
    16921 attcgacgtt ccttcgtctt ggatgagtac cgcagcatac gcgcttgccg ctgtcgttgt
    16981 atgtcggctt tggcacgcgc cgcacacagc aacatttgca actttgctca tgttgccact
    17041 cgggcaaaag cgcgaaggtg gctctgccgg cgcgctttgc gctggccggg attggcgtcc
    17101 tgaatgaagt ttttcacgag caggcttgca acgtcgttgc cggcccgaac aatgcaccgt
    17161 ccgtcgttct gcggcgggcg gtgcgtgggg atccccggat ccgccggcgt cattcctcgt
    17221 ggagagcttc accggcacgc caacccgcac cgcccgccac cttgcatccc gcaggtggcc
    17281 ttgccttgtg aggttgctgc catgaacacg ccctaccccg cctatccccg tctgcacgcc
    17341 ctgctgggcg atgccctgcc cggactggcg ctgcccactc ccgtggctga agcgctggaa
    17401 gatgcattgt gcgagggcga cggcgatgcc gcgccgtcgg ccttcttcgc ccggttgcgt
    17461 ggtatcgcgc aaagccacgc tgccgatggc caggcctggc gcgaacggca cctcagcgag
    17521 tcgcgtggcc gggaactggc cgaggccacg cggtgcctcg cggcggtgtc cgcctgcggg
    17581 ggtgtgttgc tggcggcgca gtcggctcgt gagatggatg atgtggccgc gcagtgcccg
    17641 ccgcaggtgg aggaaggcct gctgcatgcg gtggtggtgc tggccgatca tgcgggcggg
    17701 ttggtggcac ccggtgcacg cgcgggatcg tgacgccgat ggattcgtgt cgaccaaggt
    17761 cgacacccac cagagcagat tatggcgtcg gttggaaccc ggagcaggtc atggcgccgg
    17821 ttggaatcca gagcgcatca tggcggtgat ggggtgagtg ccgac
//
LOCUS       DAOKIP010000069        17749 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.069,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000069 DAOKIP010000000
VERSION     DAOKIP010000069.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 17749)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17749)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17749
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.069"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..2839)
                     /locus_tag="QEL58_001974"
     CDS             complement(<1..2839)
                     /locus_tag="QEL58_001974"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005407627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HDS1676452.1"
                     /translation="MSLALRPRAALLAVALSTALGTLAPTPVLAAKPAAPARVDIPYE
                     QFTLPNGLRVIVHTDRKAPIVAVNVWYHVGSKDEPAGRTGFAHLFEHLMFQRSENHDG
                     EYFEPFKQVGATNQNGTTNTDRTNYFENVPTTALDMALWMESDRMGHLVGAIDQAALD
                     EQRGVVQNEKRQGENQPYGQAWDQINKALYPVGHPYHHGVIGSMNDLNAASLDDVKTW
                     FRTWYGPNNAVLVLAGDIDLATAKEKVAKYFGSIPAGPTMAQPAVNVAKRSADSRETM
                     TDKVPQPRIYRAWNVPQVGTTDIDQLQLFAQVLGGAKSSRLSQRLQHQDKLVDSIGSG
                     LSTSQLGSNFVIVATVKQGQDPAKVEKIIDEELDRLIKQGPTAAELERAKTGARAGFI
                     RGIERIGGFGGKADALAECAVFTGDPGCFRTSLANIDKATAADLSRLGAQWLDKGSHT
                     LVIEPGERVALKEDPSQTPKPFTVPAVDPKYSTLPEQVDRKAGVPQTREFPQLKFPAL
                     QRATLKNGTQVILAERHEIPVVQFSYQFPGGFSADQGRKPGTANFTMSLMTEGAGKLG
                     SLAFADAADALGASLDASAGLDSMSVDLSALKENLAPSLALYRDLLREPRFEQGEIDR
                     VRATWIAGIQQEKVNPGAVAMRVLPPLLYGKGHPYAIPFTGSGDEAAINGLTREDLVD
                     FHHDWLRPQNGTLIVVGDTTLAEIVPLLDKQLGDWKASGDAPQVKAATDVALPKGPRV
                     FLIDQPGAVQANLFAGQVVSPSSATSSTRFDIANGVIGGDFTSRLNMNLREDKHWSYG
                     ARSSAVNSVGQRPWMASAPVQIDKTGPAMAEMRKEIAAFADGSKPATAAEVNRIRNIQ
                     TLSLPGAYETASAVASTIGSIVQFKRPDDYVLRRKAEIEAMTPAQVQQAAAEIKPQAL
                     TWVVVGDLKQTEAAVRALNLGEVTVIDAEGNP"
     gene            3254..3730
                     /locus_tag="QEL58_001975"
     CDS             3254..3730
                     /locus_tag="QEL58_001975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008268508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676453.1"
                     /translation="MNAKTIAIAIALIAGTAVVSSVQASESIKTLSTVQVRPAADQLA
                     QQAWEQASGIPTLATVEVRPSADQLAERNGYAATPVAAAMPITTLASVEVRPSLEQRV
                     ALAAELEAQRYAATLAAAATNVAHSVIVNLPALQVRPSAADLQALASETAQVLLRP"
     gene            3800..4279
                     /locus_tag="QEL58_001976"
     CDS             3800..4279
                     /locus_tag="QEL58_001976"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014645541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (cytidine(34)-2'-O)-methyltransferase"
                     /protein_id="HDS1676454.1"
                     /translation="MNAAPQFHVILFQPEIPPNTGNVIRLCANTGAQLHLVEPLGFAL
                     EDKQLKRAGLDYHEYSRLQVHPDLDTALARIAPKRLFALSTRASVRYDSVAFEDGDAF
                     LFGPESRGLPQDVLDALPDGARLRLPMRPDNRSLNLSNTVAVVMYEAWRQHGFAGGA"
     gene            complement(4417..5580)
                     /locus_tag="QEL58_001977"
     CDS             complement(4417..5580)
                     /locus_tag="QEL58_001977"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HDS1676455.1"
                     /translation="MALHPYDLFDVRSLLNEEERAVQESVARFTNERVLPIIGDAFDQ
                     ARFPSELVPEIASLGLLGATLPAEYGGGGLGAVSYGLICQELERGDSGLRSFVSVQSS
                     LCMYPIYAYGSEEQRQQWLPAMARGELIGCFGLTEAHGGSDPASMKTRAVRDGSDWRI
                     SGSKMWITSGPVADLAIVWAQTEDGIQGFVLEKGMAGFTTQEIKHKMSLRASLTGALF
                     FDDVRVPDSHRLPNVKGLKGPLGCLTQARFGISWGPIGAAIACLDEALGYAKERVLFG
                     RPLAATQSAQIKLAEMARRITTAQLLALQLGRLKEAGQLQPQQVSLAKWNNCRMAIDI
                     ARECRDLLGGAGITTEHVAIRHALNLESVITYEGTETVHQLVIGRELTGINAF"
     gene            5838..7514
                     /locus_tag="QEL58_001978"
     CDS             5838..7514
                     /locus_tag="QEL58_001978"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010487126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein-ubiquinone
                     oxidoreductase"
                     /protein_id="HDS1676456.1"
                     /translation="MSAEANALPPREVMEFDVVIVGAGPAGLATAIRLRQRAIEAGHE
                     LSVCVLEKGSEPGAHVLSGAVMDPRALTELFPDWAERGAPLKQKVTRDEFLFLSETGA
                     RSTPNALLPECFHNEGNYIISLGEVTRWLAQQAEALEVAIFPGFAAAEVLYGDNGEVI
                     GVATGDMGIEKDGSIGPAFERGMALQAKYTIFAEGARGHLGRQLIARYKLDEGKDPQA
                     YGIGIKELWQIDPAKHEPGLVVHAAGWPLDNDTYGGAFLYHADGGKVAIGYVVGLDYK
                     NPWLSPFEEFQRFKTHPSIRKHLEGGTRIGYGARAITAGGLMSLPKTVFPGGALVGCE
                     AGYLNVSRIKGSHAAIKTGMLCADAAFDALAADRQHDELDAYPKAFEASWLFTELQQA
                     KNFKQWFKKGQTVATLMTGIEQWLLPKLGVRNPPWTLRHSTPDHACLEPAAKHTRIAY
                     PKPDGVLTFDRLSSVFLSSTNHDENQPSHLTLKDASIPVKVNLAEYAGPEARYCPAGV
                     YEFVGEADNARLQINAQNCVHCKTCDIKDPTQNIVWVTPQGGGGPNYSGM"
     gene            7580..7981
                     /locus_tag="QEL58_001979"
     CDS             7580..7981
                     /locus_tag="QEL58_001979"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014645538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HDS1676457.1"
                     /translation="MRAFNLLTIVAMALAATACQRPGAAPATPEQAHQQAMQRAFELC
                     AGCHTVQPGGIHRFGPNLHGVIGRRAGSLPDYGYSDGMRRADITWTAQTLDAFLQSPT
                     HLVPGTRMYNAFPSAERRALVIAYLQQQSAQ"
     gene            complement(7975..11574)
                     /locus_tag="QEL58_001980"
     CDS             complement(7975..11574)
                     /locus_tag="QEL58_001980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004135049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HDS1676458.1"
                     /translation="MRSWAVRGLVLLLAVLVLPAALAQGVPGLLPLSSLQREYLAAHP
                     SIVVGQYDSGWPPFESLHDGQQVGLGPDYLSLLARQLGVRVEARRYPDWTSVLDAACR
                     GEIDVVMNVGLSADRTRCMVYTAAYGEAPLALVGRPGDLRGSDNPDLDGLRVVIEQDF
                     LTGPQVRARFPRARQLVAHSSLAALEMVRDDKADVYIGNAYVATELIAVHHLQGVVLL
                     RPSDLPPERLHFGIPSSKQPLAEALDLALAATSQAQRDALARRWLPPPQWSASAQMAL
                     SQAEKRVLEQPLKIGFAPNAAPLSFTGGDGAPSGLASEYLHRLVQAGAHLQPESSHDW
                     YEVREKARRGELQAVMGIPADSRYLGPDWVFSQPFISVPNVIVSRVDSPALLGLSDLQ
                     GKRVLLSDPERVRGYVLQQAPQARIMAARSAEQAMQRVLDGEADAYVGNLALVNQLLR
                     SRFQGRLQVAAPAGFNDQLVMAVERRHAALATTFDRLLLQMAPREHEALRGDWLSVEH
                     RNGVDWKRVLRWALPLLLVLLTAVLVHGIGYWRLRREVAGRRHLEQRLAEVTDNLPAV
                     VYQARRDADGTLSFPFIAGDLQALFGISRQQAEQDAKILLERIEEDDRARILQAVEQA
                     ARQFAPLILEFRLRAEGTDARWVRSQAHPYAAEAGAVTWSGYWVDVSEARAQADALVA
                     AKADAEQAAEAKSRFLATMSHEIRTPMSGVLGMLEVLAHSPLDAEQQRILGVIEDSAQ
                     MLRQILDDILDYSRLEAGALRLEPVPQPLRPLLESVCRLLSAQASARGLALHVQIDPQ
                     LAPAHEVDGVRLRQIVFNLLSNAIKFTAQGEVRLQLEVLGPTREDGAQPLCLSVTDTG
                     MGIAPEQLQHLFAPFTQAGAYIQRDHGGTGLGLSISQRLAQMMEGELTLHSTLGEGTR
                     AEVRLSLVEAGSGDVEALVAEQEQAALLPAALRQARVLVIEDHPTNQAMMAWRLQQLG
                     VPHVMVGDGQQGLDRLAAESFDLVITDCRMPVLDGFGFTRLLREREGRTGQPRLTVLA
                     LTASVLDDDARRCREAGMDEVLAKPLSLATLRAALLRWLPQAQGQTFAEPETEAVADD
                     GMALPDLAALQQRFGSRAVAEQLRDSLLQASEEDLAAVQRALQAGDRAAAALHLHRQA
                     GGLGAVGAGVLAGQANALVERLQDATETDPAPLFAAVAAFVARLQQQLQRLAH"
     gene            11650..12288
                     /locus_tag="QEL58_001981"
     CDS             11650..12288
                     /locus_tag="QEL58_001981"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005420808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDS1676459.1"
                     /translation="MSLRIIIADDHPVVRIGTRAVIESSGVGRVVGEADSAQALMALL
                     GDQPCDLLVTDYSMPGSPQADGFAMIGMIRRRHPELPVLMLSVSNNLAILRMVLDSGV
                     LGLVDKSSSMDELPQAIQAVYRGQAYISRSLRERVEAAGGWRMREGDGKPLSPREVEV
                     LRLLGTGMTVKEISLQLHKSVSTISRQKGDAMLKLGLKGDAELFDYLRDGKI"
     gene            12540..12947
                     /locus_tag="QEL58_001982"
     CDS             12540..12947
                     /locus_tag="QEL58_001982"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014645533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine zipper 2TM domain-containing protein"
                     /protein_id="HDS1676460.1"
                     /translation="MLSTSTLSFRGLAMALALVAGVAVVSDASAMSRKDKRTLVGAVV
                     GGVAGNLLSNGDPAATVGGAVAGGAIGNLTTSDRRDRRYYDNRYYDNRYDRRYDRGYY
                     RSGYYDRGDDRRWQRDRYYDNRYYNDRGRHRGW"
     gene            13076..14200
                     /locus_tag="QEL58_001983"
     CDS             13076..14200
                     /locus_tag="QEL58_001983"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014035546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphotransferase"
                     /protein_id="HDS1676461.1"
                     /translation="MTSSSHRVQGLNNDEVAADWPPISTRDIGWLREHYPQLDGQSQA
                     RWHSPRPLSAAAIVDGAQGAVFIKRHHHSVRSAACLEEEHRFIAHLAAAGLPVVQVLA
                     AADGHTAVEQGEWTFELHAVGVGDDLYRDAVSWSLLTDVAQAREAGRMLARLHQASDS
                     YHAPQRSTHVLVARDDLIRADDPIAAIKSDLATRPGLARYLARIPWETQLRRDVLPWH
                     SGLAERLRDEPRLWAHNDWHVSNLLWRDGQVSTVLDFGLASPTSALFDLATAIERNAV
                     AWLQLERGIEAVRIDIALALLDGYRQVLPLSATRVHLLADLLPMVHFDFALSEVEYFE
                     GVTGSTANADVAWQPFMLGHPAWFHSPPGQALLQALHAAA"
     regulatory      14244..14339
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            14409..16598
                     /locus_tag="QEL58_001984"
     CDS             14409..16598
                     /locus_tag="QEL58_001984"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent siderophore receptor"
                     /protein_id="HDS1676462.1"
                     /translation="MNRCLRPTLLSLALCAALPLHASEADAAPDVAATGAERSPTELA
                     AVRVQAGKPKADTSRVNAFGGGSWKDTPASVNVLERDYLDRRQVRSLSELASNDASLG
                     DAYAPVGYYQNIAIRGFALDAATGYRFNGLSIAGEQRLALENVQAVEILKGEAGLAAG
                     VMAPGGIINYIGKRPAEVRTATLGTDSEGSRYVAVDVGHWITPRFGLRLNAAWDSSNS
                     YVEHADGRRNFYSLAADWLIGERGKLEVDANYQTSSQRSVSGYQLLGARDLPRGVDRE
                     HLLGYQPWQRPVDIASTNITALHTYDFNDAWQSRVSVGHSRSVIDDNVAFAYGCYYAA
                     QCADGSVPGNYFAPNGDYDVYDYRSPDDTRRNQQARAELRGRFETGTVGHQLTVGADY
                     FRRTVDKRPSVNEYVGTSNIHDAQVPVFEPSPKMPGPSARRLDSRQTAFFALDRMSFG
                     DDWQWLAGGRFVRLDERAYDKRGTPQRHSRLSRFLPQTALVWKATDQLNAYASYVRGI
                     SLGQEAPFWTSNADTFLPSVQSRQLEVGVKYVPVEALTLGAAVFRISQPYQYAQPDNS
                     DAGYTFVQQGTQTHTGLELTANGQLTDALQIVASASVLQARARDTRTPAYEGHQLVNV
                     PKVRASVHLAYALPFVQGLEVTGGWRYAGANVARADGGVRAPDYSVFDAGLRFQHRLH
                     ERAVTWNLSVDNVFNRFYWRDTGSSGGDYYLFPGAPRQARLSVTFAL"
     gene            16607..17179
                     /locus_tag="QEL58_001985"
     CDS             16607..17179
                     /locus_tag="QEL58_001985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014035544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinamide mononucleotide transporter"
                     /protein_id="HDS1676463.1"
                     /translation="MLEWTAALCSILGVWLMARRRLSAWPVGLLSVTLYGLVFAEAKL
                     YSDTLLQVAFGGFLVYGWLNWRQHAADEGSVRIVPLARGKLLRDLAIGLCGGVALGAA
                     MHTFTDAALPWLDAMLTALSLVGQWWQARRHVACWWVWIAVDVVYVGAYLFKSLHVTA
                     ALYVFFLGLAVFGLRAWSAAAREPQGAPVR"
     gene            complement(17276..17692)
                     /locus_tag="QEL58_001986"
     CDS             complement(17276..17692)
                     /locus_tag="QEL58_001986"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676464.1"
                     /translation="MARTGNKGGMRRWWRPLAAVFGALALGSASVSAQDAPAHWMAYA
                     AAVGGQLQQRLQLEQDPQAQRVLEWLQAHPDTPTPLPVSVWIAADGRISKLEFDSLGD
                     RQVDADLRAALLAAPLQAPPPDMRQPLRLGLALEPK"
BASE COUNT         2845 a         6277 c         5784 g         2843 t
ORIGIN      
        1 ccgggttgcc ttcggcgtcg atcaccgtca cctcgcccag gttcagcgcg cgcacggccg
       61 cttcggtctg cttgaggtca cccaccacca cccaggtcag cgcctgcggc ttgatctcgg
      121 cggcggcctg ctgcacctgc gccggggtca tcgcctcgat ttcggccttg cggcgcagca
      181 catagtcgtc cggacgcttg aactgcacga tcgaaccgat ggtcgacgcc accgcgctgg
      241 cggtctcgta ggcaccgggc aggctcaggg tctggatgtt gcggatgcgg ttgacctcgg
      301 cagcggtggc cggcttgctg ccatcggcga acgcggcgat ttccttgcgc atctccgcca
      361 tcgccgggcc ggtcttgtcg atctgcaccg gcgcactggc catccacgga cgctgaccca
      421 ccgaattgac cgcgctgctg cgcgcaccgt acgaccagtg cttgtcttcg cgcaggttca
      481 tgttcaggcg cgaggtgaag tcaccaccga tcacgccgtt ggcgatgtcg aagcgggtcg
      541 agctggtggc gctggatggc gacaccacct ggccggcgaa caggttggcc tgcaccgcac
      601 ccggctggtc gatcaggaac acgcgcgggc ccttcggcag cgcgacgtcg gtggcggcct
      661 tcacctgcgg ggcgtcgcca ctggccttcc agtcgcccag ctgcttgtcc agcagcggca
      721 cgatctcggc cagcgtggtg tcaccgacca cgatcagggt gccgttctgc gggcgcagcc
      781 agtcgtggtg gaagtcgacc aggtcttcgc gggtcaggcc gttgatcgcc gcttcgtcac
      841 cgctgccggt gaacggaatg gcgtacgggt ggcccttgcc gtacagcaac ggcggcagca
      901 cgcgcatcgc taccgcaccc gggttgacct tctcctgctg gatgccggcg atccaagtgg
      961 cgcgcacccg gtcgatctcg ccctgctcga agcgcggctc gcgcagcagg tcgcggtaca
     1021 gcgccagcga cggagccagg ttctccttca gcgcggacag gtccacgctc atcgaatcca
     1081 ggccggccga ggcatccagg ctggcgccca gtgcgtcggc agcatcggcg aaggccagcg
     1141 aacccagctt gccggcgcct tcggtcatca ggctcatggt gaagttggcg gtgcccggct
     1201 tgcggccctg gtcggcgctg aagccacccg ggaactggta gctgaactgc accaccggga
     1261 tttcatggcg ttcggccagg atcacctggg tgccgttctt cagcgtggca cgctgcagcg
     1321 ccgggaactt cagctgcggg aactcgcggg tctgcggcac gccggccttg cggtccacct
     1381 gctcgggcag ggtgctgtac ttcgggtcca ccgcaggcac ggtgaacggc ttcggcgtct
     1441 ggctcgggtc ttccttcagc gccacgcgct cacccggctc gatcaccagg gtgtggctgc
     1501 ccttgtccag ccactgcgcg cccagacggc tcaggtcggc ggccgtggcc ttgtcgatgt
     1561 tggccagcga cgtgcggaag cagcccgggt cgccggtgaa cacggcgcac tcggccagcg
     1621 cgtcggcctt gccgccaaaa ccaccgatgc gctcgatgcc gcggatgaag ccggcgcggg
     1681 cgccggtctt ggcgcgttca agttcggccg cggtcggacc ctgcttgatc agccggtcca
     1741 gttcctcatc gatgatcttc tcgaccttgg ccgggtcctg gccctgcttc acggtcgcca
     1801 cgatcacgaa gttggagccc agctgcgagg tcgacaggcc cgaaccgatg ctgtccacca
     1861 gcttgtcctg gtgctgcagg cgctggctaa ggcgcgagga cttggcgcca ccgagtacct
     1921 gcgcgaacag ctgcagctga tcgatatcgg tggtgccgac ctgcggcacg ttccaggcgc
     1981 ggtagatgcg tggctgcggc accttgtcgg tcatcgtctc gcggctgtcg gcactgcgct
     2041 tggccacgtt caccgccggc tgcgccatgg tcggaccggc cgggatgctg ccgaagtact
     2101 tggcgacctt ctccttggcg gtggccaggt cgatgtcacc ggccagcacc agcactgcat
     2161 tgttcgggcc gtaccaggtg cggaaccagg tcttcacgtc gtccagcgag gccgcgttga
     2221 gatcgttcat cgaaccgatc acaccgtggt ggtacgggtg gccgaccggg tacagcgcct
     2281 tgttgatctg gtcccaggcc tggccatagg gctggttctc gccctggcgc ttctcgttct
     2341 gcaccacgcc acgctgctcg tccagcgccg cctggtcgat cgcaccgacc agatggccca
     2401 tgcggtccga ttccatccac agcgccatgt ccagcgcggt ggtcggcacg ttctcgaagt
     2461 agttggtgcg atcggtattg gtggtgccgt tctggttggt ggcaccgacc tgcttgaacg
     2521 gctcgaagta ctcgccgtcg tggttttcgc tgcgctggaa catcaggtgt tcgaacaggt
     2581 gcgcgaagcc ggtgcggccg gccggttcgt ccttgctgcc cacgtggtac cagacgttga
     2641 ccgccacgat cggcgccttg cgatcggtat gcacgatcac ccgcaggccg ttgggcaggg
     2701 tgaactgctc atacgggata tcgaccctgg ccggggcagc cggcttggcg gccagcacag
     2761 gggtgggcgc aagcgtgccc agggcggtgc tgagggcgac agccagcaat gcagcgcgcg
     2821 ggcgaagggc gagagacata tccggatcct tggtcacgta ggtgaacccc gatcctagcg
     2881 tgcgcacgca gcggcaggaa tcggtcgcca gtcactgggg gtgtttgccc tgatgcgcca
     2941 tttcggcccc tcgctgcggc cttctggcag gtcacatgcg gcggcaaccc gcgtccggac
     3001 agtgtccgtc gcccatcgaa tggacaggtg tccgcccagc ggacactttt cagatcggaa
     3061 aaatcctttc aaatcaatca ctaaaagttg gcacggggat tgcttggtat ttcctgcgcc
     3121 aggaagggct tcagacgcaa gatgactgaa gactgaacaa atgcaggaaa tcgaaaattt
     3181 tccttgcaag cccagaatcg gtgtactacc ttactaccac accactgatc accaacacta
     3241 aacaggcccc gtcatgaacg ccaagaccat tgccatcgcc atcgccctga ttgccggcac
     3301 cgcggttgtt tcgtcggtgc aggcctccga atccatcaag accctgtcca ccgtgcaggt
     3361 ccgcccggcc gccgaccagc tggcccagca ggcctgggaa caggccagcg gcatcccgac
     3421 cctggccacc gtggaggtgc gcccgagcgc cgaccagctg gccgagcgca acggctacgc
     3481 cgccactccg gtcgccgccg cgatgccgat caccacgttg gcctcggtgg aagtgcgccc
     3541 cagcctggag cagcgcgtcg ccctggccgc cgaactggaa gcccagcgct acgccgccac
     3601 cctggccgcc gccgctacca acgttgccca ctcggtcatc gtcaacctgc cggccctgca
     3661 ggtgcgcccg agcgctgccg acctgcaggc cctggccagc gaaaccgccc aggtcctgct
     3721 gcgcccgtaa ccggtgccgc cctgccccgt gcagggcgtg cgccgtaaag gcggcggccg
     3781 tcgcaggtac actgcgccga tgaatgccgc gccccagttc cacgtgatcc tgttccaacc
     3841 ggaaatcccg cccaacacgg gcaacgtgat ccgtctctgc gccaacaccg gcgcgcagct
     3901 gcacctggtc gagccgctcg gcttcgcact ggaagacaag cagctcaagc gcgccgggct
     3961 ggactaccac gagtactcgc gcctgcaggt gcacccggac ctggacaccg cgctggcgcg
     4021 gatcgcgccc aagcggctgt tcgccctgag tacccgggca agcgtgcgtt atgacagcgt
     4081 ggcctttgaa gatggcgatg cgttcctgtt cggcccggaa agccgcggcc tgccgcagga
     4141 cgtactcgat gctttgcccg atggcgcccg cctgcgcctg ccgatgcggc cggacaatcg
     4201 aagcctcaat ctttccaaca ccgtcgccgt ggtgatgtac gaggcctggc gccagcatgg
     4261 gtttgccggc ggcgcgtaaa ccgcctcaga tgggtgtgaa ccgctcctgg tggatgcgga
     4321 ccgcacttgg tgggtgcgga ccttggtccg cacaaatgcc tggccgggtg ctgaaggaat
     4381 gtgccaacca aggttggcac ccaccacaac ccgatttcag aacgcgttga tgccggtcag
     4441 ttcgcggccg atcaccagct ggtgcacggt ctcggtgcct tcataggtga tcaccgattc
     4501 caggttcagt gcgtggcgga tcgccacgtg ctcggtggtg atgccggccc cacccagcag
     4561 atcgcgacac tcgcgggcga tatcgatcgc catgcggcag ttgttccact tggccaggct
     4621 gacctgctgc ggctgcagct ggcccgcttc cttcaaccgc cccagctgca gcgccagcag
     4681 ctgcgcggtg gtgatgcggc gggccatctc ggccagcttg atctgtgcgc tctgcgtggc
     4741 cgccaacggg cgcccgaaca gcacgcgctc cttggcatag cccagtgctt catccaggca
     4801 ggcgatggcc gcaccaatcg ggccccagct gatgccgaag cgggcctggg tcaggcagcc
     4861 cagcggcccc ttcaggccct tcacgttcgg caggcgatgg ctgtcgggca ctcgcacgtc
     4921 gtcgaagaac agcgcaccgg tcagcgacgc gcgcaggctc atcttgtgct tgatttcctg
     4981 ggtggtgaag ccggccatgc ccttctccag cacgaagccc tggatgccgt cctcggtctg
     5041 cgcccagacg atcgccaggt cggccaccgg cccgctggtg atccacatct tgctgccgct
     5101 gatccgccag tcactgccgt cgcgcaccgc acgggtcttc atgctggccg gatcggaacc
     5161 gccgtgcgcc tcggtcaggc cgaagcagcc gatcagttcg ccgcgcgcca tcgccggcaa
     5221 ccactgctgg cgctgttcct cgctgccata ggcgtagatc gggtacatgc acagcgagct
     5281 ctgcaccgaa acgaagctgc gcaggcccga gtcgccacgc tccagctcct ggcagatcag
     5341 gccgtagctg accgcaccga ggccaccgcc gccgtattcg gccggcaggg tggcgccgag
     5401 caggcccagc gatgcgatct ccggcaccag ttcagatgga aaacgggcct ggtcaaaggc
     5461 atcgccgatg atcggcagca cccgctcgtt ggtgaagcgg gcgacgctct cctgcaccgc
     5521 gcgctcttcc tcgttgagca gggaacggac atcgaacaga tcgtacggat gcaaagccat
     5581 ggcactcacg cgcagtcagg accgggccat tgtcggtcat ccgggcagag cgtgccgacc
     5641 caggtcggca cccaccagag cggcggccct acgctgcaat gcagcaatcg ggatgtgaac
     5701 atcggcgatc tagctcgatc acgcgcggcc cggtaccctg acacattcaa acaaccgttt
     5761 cgctcgtggc tgcacgcgcg atttccaggc accgccggtg gccccgatgc cggccctacc
     5821 cacgagtcat gcaatcgatg agcgctgaag ccaacgccct gcccccgcgt gaagtaatgg
     5881 agttcgacgt ggtgatcgtc ggcgccggcc ccgccggcct ggccaccgcg atccgcctgc
     5941 gccaacgcgc gatcgaagcc ggtcacgaac tgtcggtctg cgtgctggag aagggctccg
     6001 agccgggcgc gcatgtgctg tccggcgcgg tgatggaccc gcgtgcactg accgagctgt
     6061 tcccggactg ggccgagcgc ggcgcgccgc tgaagcagaa ggtcacccgc gacgaattcc
     6121 tgttcctcag cgaaaccggc gcacgcagca cgcccaacgc gctgctgccg gagtgcttcc
     6181 acaacgaagg caactacatc atcagcctgg gcgaagtgac ccgttggctg gcgcagcagg
     6241 ccgaggcgct ggaagtggcg atcttccccg gcttcgccgc cgccgaggtg ctgtatggcg
     6301 acaacggtga agtgatcggc gtagccaccg gcgacatggg tatcgagaag gacggcagca
     6361 tcggcccggc cttcgagcgt ggcatggcgc tgcaggccaa gtacacgatc ttcgccgaag
     6421 gcgcgcgcgg ccacctcggc cgccagctga tcgcccgtta caagctggac gaaggcaagg
     6481 acccgcaggc ctacggcatc ggcatcaagg agctgtggca gatcgacccg gccaagcatg
     6541 agccgggcct ggtggtgcac gccgccggct ggccgctgga caacgacacc tatggcggcg
     6601 cgttcctgta ccacgctgac ggcggcaagg ttgccatcgg ctacgtggtc ggcctggact
     6661 acaagaaccc gtggctgagc ccgttcgagg aatttcagcg cttcaagacc cacccgtcca
     6721 tccgcaagca cctggaaggt ggcacccgca tcggttacgg cgcgcgcgcc atcaccgccg
     6781 gtggcctgat gtcgctgccg aagacggtgt tccccggtgg cgcactggtc ggctgcgagg
     6841 ccggctacct caacgtcagc cgcatcaagg gcagccacgc cgcgatcaag accggcatgt
     6901 tgtgcgccga tgcggccttc gacgccctgg ctgccgaccg ccagcacgat gaacttgacg
     6961 cctacccgaa ggcgttcgaa gccagctggc tgttcaccga actgcagcag gccaagaact
     7021 tcaagcagtg gttcaagaag ggccagaccg tggccacgct gatgaccggc atcgagcagt
     7081 ggctgctgcc caagctgggc gtgcgcaacc caccgtggac cctgcgccac agcaccccgg
     7141 accacgcctg cctggagccg gcggccaagc acacccgcat cgcctacccg aagccggatg
     7201 gcgtgctgac cttcgaccgc ctcagctcgg tgttcctgag cagcaccaac cacgacgaga
     7261 accagcccag ccacctgacg ctgaaggacg ccagcattcc ggtgaaggtg aacctggccg
     7321 agtacgccgg cccggaagca cgctactgcc cggccggcgt gtacgagttc gtcggcgagg
     7381 ccgacaacgc gcggctgcag atcaacgcgc agaactgcgt gcactgcaag acctgcgaca
     7441 tcaaggaccc gacccagaac atcgtctggg tgaccccgca gggcggcggc ggcccgaact
     7501 actcgggcat gtgaccgcca cgggctgcga ccgcgtgtcg cagcccggtc gtttccgcgc
     7561 accgctatcc tgcccgccca tgcgcgcctt caacctgctc accatcgttg ccatggcact
     7621 ggcggccacg gcctgccagc gcccgggcgc cgcaccggcc acgcccgaac aggcccacca
     7681 gcaggccatg cagcgcgcgt tcgagctgtg cgccggttgc cataccgttc agcctggcgg
     7741 gatccatcgc ttcgggccga acctgcatgg cgtgatcggt cgccgtgcag gcagcctgcc
     7801 cgactacggc tattccgacg gcatgcgccg cgccgacatc acctggaccg cgcagaccct
     7861 ggatgcattc ctgcagtcgc ccacccacct ggtgccgggc acgcgcatgt acaacgcctt
     7921 ccccagcgcc gaacgccgcg cgttggtgat tgcctacctg cagcagcagt cggctcagtg
     7981 agccagccgc tgcagctgtt gctgcagccg ggccacgaac gccgcgaccg cagcgaacag
     8041 cggcgccgga tcggtttcgg ttgcgtcctg caggcgctcg accagcgcat tggcctggcc
     8101 tgccagcacg cccgccccca ccgccccgag gccgccggcc tggcgatgca ggtgcagcgc
     8161 cgcggccgca cggtcaccgg cctgcagcgc gcgctgcacg gccgccagat cctcctcgct
     8221 ggcctgcagc aggctgtcgc gcagctgctc ggccaccgcc cgtgagccga accgctgctg
     8281 cagggctgcc agatcgggca gcgccatgcc gtcgtcggcc accgcctccg tttccggctc
     8341 ggcgaacgtc tggccctgtg cctgcggcag ccagcgcagc agcgccgcac gcaacgtggc
     8401 cagtgacagc ggcttggcca gcacctcatc catgccggcc tcgcggcagc ggcgcgcatc
     8461 gtcgtccagc acgctggcgg tcaacgccaa cacggtcagc cgtggctggc cggtacggcc
     8521 ttcgcgctcg cgcagcaggc gggtgaagcc gaacccgtcc agtaccggca tgcggcaatc
     8581 ggtgatcacc aggtcgaaac tctccgcggc cagccgatcc agcccctgct ggccatcgcc
     8641 gaccatcacg tgcggcacgc ccagctgctg caaccgccag gccatcatcg cctggttggt
     8701 cggatgatcc tcgatcacca gcacgcgcgc ctggcgcagc gcggccggca acaatgcggc
     8761 ctgctcctgc tcggccacca gggcctcgac atcgccactg cccgcttcca ccagcgacaa
     8821 ccgtacttcg gcacgggtgc cctcgcccag cgtgctgtgc agggtcagct cgccctccat
     8881 catctgcgcc agccgctggc tgatgctcag gcccaggccg gtgccaccgt ggtcgcgctg
     8941 gatgtaggca ccggcctggg tgaagggtgc gaacaggtgc tgcagctgct ccggtgcgat
     9001 gcccatgccg gtgtcggtga cgctcaggca cagcggctgg gcgccgtcct cgcgggtcgg
     9061 ccccagcacc tccagctgca ggcggacctc gccctgggcg gtgaacttga tggcgttgct
     9121 gagcaggttg aacacgatct ggcgcaggcg tacgccatcg acttcgtgcg cgggcgccag
     9181 ctgtggatca atctgcacgt gcagcgccag cccgcgtgca ctggcctggg ccgagagcag
     9241 gcggcaaacg ctttccagca acggccgcag gggctgcggc accggctcca ggcgcagcgc
     9301 accggcttca agccgggagt aatcgaggat gtcgtcgaga atctgccgca gcatctgcgc
     9361 cgaatcctcg atcactccca gaatgcgttg ctgctcggcg tccagcggtg aatgcgccag
     9421 cacttccagc atgccgagca cgccactcat cggcgtgcgg atctcatgac tcatggtggc
     9481 caggaaacgc gacttggcct ccgccgcctg ctcggcgtcg gccttcgccg ccaccagggc
     9541 atcggcctgt gcgcgcgcct cgctcacatc cacccagtag ccactccacg tcacggcgcc
     9601 ggcttcggcc gcatagggat gggcctggct gcgcacccag cgcgcgtcgg tgccctcggc
     9661 gcgcaggcgg aattccagga tcaatggcgc gaactggcgc gcggcctgct cgaccgcctg
     9721 caggatgcgc gcgcgatcgt cctcctcgat gcgctccagc aggatcttcg catcctgctc
     9781 ggcctgctgc cggctgattc cgaacagggc ctgcagatcg ccggcgatga acgggaaact
     9841 gagcgtgcca tcggcatcgc ggcgtgcctg gtagaccacc gccgggaggt tgtcggtgac
     9901 ttcggccagg cgctgttcca ggtgacgccg cccggccact tcgcggcgca gccgccagta
     9961 gccgatgcca tgcaccagca ctgcggtcag cagcaccagc agcagcggca gtgcccagcg
    10021 cagcacccgc ttccagtcga ccccattgcg gtgctcgacc gacagccagt cgccgcgcaa
    10081 tgcctcgtgc tcgcgcggtg ccatctgcag cagcaggcgg tcgaaggtcg tggccagcgc
    10141 ggcatggcgt cgctccaccg ccatcaccag ctgatcgttg aaacccgccg gggcagcaac
    10201 ctgcaagcgc ccctggaagc ggctgcgcag cagctgattg accagcgcca ggttgcccac
    10261 ataggcatcg gcttcgccat caagaacccg ctgcatcgcc tgttcggcac tacgtgccgc
    10321 catgatccgg gcctgcggtg cctgctgcag cacgtagcca cgcacgcgct ccggatcgga
    10381 cagcagaacg cgctttccct gcaggtccga caggcccagc agggcagggc tgtcgacgcg
    10441 gctgacgatc acgtttggca cgctgatgaa gggctggctg aacacccagt ccggcccgag
    10501 gtagcgcgaa tcggccggga tgcccatcac cgcctgcagc tcgccacggc gcgccttctc
    10561 gcgcacctcg taccagtcgt ggctgctctc cggctgcagg tgtgcaccgg cctgcaccag
    10621 ccgatgcagg tactcgctgg ccaggccact gggcgcacca tccccgccgg tgaacgacaa
    10681 cggcgccgca ttcggtgcga agccgatctt cagtggctgc tccagcaccc gcttttcggc
    10741 ctggctcagc gccatctgcg ctgacgccga ccattgcggt ggcggcagcc agcgcctcgc
    10801 gagggcatcg cgctgggcct ggctggttgc ggccagggcc aggtccagcg cttcggccag
    10861 cggctgcttg ctgctgggga tgccgaagtg cagccgttcg gggggcagat cgctggggcg
    10921 cagcagcacc acaccctgca gatggtggac ggcgatcagt tcagtggcga cataagcatt
    10981 gccgatatag acatcagctt tgtcgtctct gaccatctcg agcgccgcca gcgagctgtg
    11041 tgcgacaagc tgccgtgcgc gcgggaagcg tgcccgcacc tgcggaccgg tcaggaaatc
    11101 ctgctcgatc actacccgca atccatccag atcggggttg tcggagccac gcaggtcgcc
    11161 cggccggccc accagggcca acggtgcttc gccataggcg gccgtgtaca ccatgcaacg
    11221 ggtgcggtcg gcactgagac cgacattcat caccacatcg atctcgccac ggcacgccgc
    11281 atccaacacg gatgtccaat ctggatagcg acgggcctcc accctgacgc ctagctggcg
    11341 ggcaagaagc gacagataat ccggtcccag gccaacctgc tggccgtcat ggagggactc
    11401 gaacggcggc cagccgctgt catactggcc cacgacgatg ctcggatggg cggcgaggta
    11461 ctcacgctgc agggagctga gcggcagcag ccctggaacg ccctgtgcca aggccgctgg
    11521 cagcaccagt acggccagca gcaggaccag cccgcgaaca gcccagctac gcatcggcgt
    11581 cgatctccta gaatgctgcc agggatcgcg atggtcgcgg cccggcctgc ccggtggtca
    11641 tactagagca tgagcttgcg catcatcatc gcagacgacc acccggtggt ccgtatcggc
    11701 acccgcgccg tcatcgaatc gagcggggtg ggccgcgtgg tcggcgaagc cgacagtgca
    11761 caggcgctga tggccctgct gggcgaccaa ccctgcgacc tgctggtcac cgactactcc
    11821 atgcccggca gcccccaggc cgatggcttc gccatgatcg gcatgatccg ccgccgtcat
    11881 cccgagctgc cggtgctgat gctcagcgtc tccaacaacc tggcgatcct gcgcatggtg
    11941 ctcgacagcg gcgtgctggg cctggtcgac aagagctcgt cgatggacga actgccgcag
    12001 gccatccagg cggtctaccg cggccaggcc tacatcagcc gcagcctgcg cgagcgggtc
    12061 gaggccgcgg gcggctggcg catgcgcgag ggcgacggca agccgctgtc gccccgtgag
    12121 gtggaggtac tgcggctgct cggcaccggc atgaccgtga aggaaatctc gctgcaactg
    12181 cacaaaagtg tcagcaccat cagccgccag aagggtgacg ccatgctcaa gctgggcctg
    12241 aagggcgacg ccgaactgtt cgattacctg cgcgacggca agatctgaga cgcagcccgc
    12301 acaacacagg ggcccccggg acggccgggg cgcaccgccc gttccctatc tgccagctga
    12361 gcggccaagc ccgctttcag ccttgcttca tgccgcctgc cgctagatga atgcgcaagc
    12421 cgcacggtgg gccaggcaat gttccggcaa tgttggaacg ccagcgtgga catcacggca
    12481 gccggggcgc cccgcgccct ccctgcccag cgtggcatgc acctcacagg agaacgaaca
    12541 tgctcagtac ttccacactc agcttccgtg gtctggcgat ggctctggca ctggtggccg
    12601 gtgtcgccgt ggtcagcgat gccagcgcga tgtcgaggaa ggacaagcgc accctggttg
    12661 gcgccgtggt cggtggcgtg gccggcaacc tgctctccaa cggcgacccc gccgcgaccg
    12721 tcggcggtgc cgtggccggc ggcgcgatcg gcaacctgac cacctccgac cgccgcgacc
    12781 gtcgctatta cgacaaccgc tactacgaca accgctacga ccgccgctac gatcgtggct
    12841 actaccgcag cggctactac gaccgcggtg acgaccgccg ctggcagcgc gatcgctatt
    12901 acgacaaccg ctactacaac gaccgcggcc gtcatcgcgg ctggtaagcg gcggcacggc
    12961 tcaccgcgag cgggcgcagg gacgggcggg tcgatgaccc gcccgtttgc gttggccgcg
    13021 ggcatggcgt tgaatgcgca gccttggatg tgactttccc ctttcgggct gcggcatgac
    13081 ttcttcctcc caccgcgtgc agggcctcaa caacgacgag gtcgccgccg actggccacc
    13141 gatcagcacg cgggacatcg gctggctgcg cgagcactac ccgcagcttg acgggcaaag
    13201 ccaggcgcgc tggcacagcc cgcggccact gtcggccgcc gccattgtcg acggcgcgca
    13261 gggtgcggtg ttcatcaagc gccatcacca cagcgtgcgc agcgcggcct gcctggaaga
    13321 agagcaccgc ttcatcgcgc atctcgcggc ggcaggcctg cccgtggtgc aggtgctggc
    13381 ggccgccgat gggcataccg ccgtcgaaca gggcgagtgg acctttgaac tgcacgccgt
    13441 tggcgtaggc gacgatctgt accgcgatgc agtgtcgtgg tcgctgctga ccgatgtcgc
    13501 gcaggcccgc gaagccggcc gcatgctggc gcgactgcac caggcttcgg acagctacca
    13561 cgcgccgcag cgcagcaccc atgtgctggt cgcgcgcgac gatctgatcc gtgccgacga
    13621 tccgattgca gcaatcaagt ctgacctggc cacacgcccc ggcctggccc gctacctcgc
    13681 acgcatcccg tgggaaacgc agctccgccg cgacgtactg ccgtggcaca gcggcctggc
    13741 cgagcgcctg cgcgacgaac cccggctatg ggcgcacaac gactggcacg tctccaacct
    13801 gctgtggcgc gacggccagg tcagcaccgt gctggatttc ggcctggcct cgcccaccag
    13861 cgcactgttc gacctcgcca ccgcgatcga gcgcaacgcg gtggcgtggc tgcagctgga
    13921 gcgcggtatc gaggcggtac gcatcgacat cgcgctggcc ctgctcgacg gctatcgcca
    13981 ggtgctgccg ctgtcggcca cgcgcgtgca cctgctggcc gacctgctgc cgatggtcca
    14041 tttcgacttc gcactgtccg aagtggagta cttcgaaggt gtcaccggct cgaccgcgaa
    14101 tgccgacgta gcctggcagc ccttcatgct ggggcatccg gcatggttcc acagcccccc
    14161 cggtcaggca ctgctgcagg ccctgcacgc cgcggcatga acgccaccgg ctcgcaaatc
    14221 cgtaccattt gtagtgaaat ggtcacctga agcgggggtg cctggatctg ccaggctgag
    14281 agagtccctt ggaacctgat ccggtttgca ccggcgtagg gagctttgag ccgcagccac
    14341 acccccgtca tgggccgtgc acctgcgcgc cgtcgcttcg tctcccttgt tgtccgaaga
    14401 cgaaccgaat gaaccgctgc ctgcgcccca ccctgctctc cctcgccctc tgcgccgcgc
    14461 tgccgctgca tgccagcgag gccgacgctg ctcccgatgt ggctgccacc ggcgccgaac
    14521 gttcgcccac cgaactggcg gcggtgcgcg tgcaggccgg caagccgaag gcggatacct
    14581 cacgcgtgaa tgccttcggt ggcggttcgt ggaaggacac gccggcttcg gtgaacgtgc
    14641 tcgagcgcga ctatctcgac cgccgccagg tgcgttcgct gtccgagctg gccagcaacg
    14701 atgcctcgct gggtgatgcg tatgcacccg tgggctatta ccagaacatc gccatccgcg
    14761 gattcgcgct cgatgccgcc accggctatc gcttcaacgg cctgtccatc gctggcgaac
    14821 agcgccttgc gctggagaac gtgcaggcgg tggagatcct caagggtgaa gccggcctgg
    14881 ccgccggtgt gatggcgccg ggcggcatca tcaattacat cggcaagcgt ccggccgaag
    14941 tgcgcaccgc cacgctcggc accgattcgg aaggctcgcg ctacgtcgcc gtcgatgtcg
    15001 gccactggat caccccgcgt ttcggcctgc gcctgaatgc cgcatgggat tccagcaatt
    15061 cctacgtcga gcacgccgat ggccgccgca acttctactc gctggccgcc gactggctga
    15121 tcggcgaacg cggcaagctg gaagtggatg ccaactacca gaccagctcg cagcgctcgg
    15181 tgtccggcta ccagctgctg ggcgcgcgtg acctgccgcg cggtgtcgat cgcgagcacc
    15241 tgctcggcta ccagccgtgg cagcgcccgg tggatatcgc cagcaccaac atcaccgccc
    15301 tgcacaccta cgacttcaac gacgcgtggc agtcgcgcgt ctcggtcggc cacagccgct
    15361 cggtgatcga tgacaacgtc gccttcgcct acggctgcta ttacgccgcg caatgcgccg
    15421 atggcagcgt gccgggcaac tacttcgccc ccaatggcga ctacgacgtc tacgactacc
    15481 gcagccccga cgacacccgg cgcaaccagc aggcgcgtgc cgagctgcgc ggccgcttcg
    15541 agaccggcac ggtcggccac cagctgaccg tcggtgccga ctatttccgc cgcaccgtgg
    15601 acaagcgccc cagcgtcaac gagtacgtcg gcaccagcaa catccacgac gcgcaggtgc
    15661 cggtgttcga gccgtcgccg aagatgcccg gcccgtccgc acggcgcctg gacagccgcc
    15721 agaccgcatt cttcgcgctg gaccggatga gcttcggtga cgactggcaa tggctggccg
    15781 gtggccgctt cgtgcggctg gatgaacgcg cgtacgacaa gcgcggcacc ccacagcgcc
    15841 acagccgcct gtcgcgcttc ctgccgcaga ccgcactggt gtggaaggcg accgaccagc
    15901 tcaatgccta cgccagctac gtgcgcggca tttcgcttgg ccaggaagcg ccgttctgga
    15961 ccagcaacgc cgataccttc ctgccctcgg tgcagtcgcg gcagctggaa gtgggcgtga
    16021 agtacgtgcc ggtcgaggcg ttgaccctgg gcgcagcggt gttccgcatt tcgcagccgt
    16081 accagtacgc ccagcccgac aacagcgacg ctggctatac cttcgtccaa cagggcacac
    16141 agacccacac cggcctggag ctgaccgcca acggccagct gaccgatgca ctgcagatcg
    16201 tggccagcgc cagcgtgctg caggcgcgcg cgcgcgacac ccgcacgccg gcctatgaag
    16261 gccatcagct ggtgaacgta ccgaaggtgc gcgccagcgt gcacctggcc tacgcgttgc
    16321 ccttcgtgca gggcctggag gtgaccgggg gctggcgtta tgccggtgcc aacgtcgccc
    16381 gtgccgatgg cggcgtgcgt gcaccggact actcggtgtt cgatgccggc ctgcgtttcc
    16441 agcaccgcct gcacgagcgt gcggtgacct ggaacctgtc ggtggacaac gtgttcaacc
    16501 gcttctactg gcgcgatacc ggcagcagcg gtggtgacta ctacctgttc cccggcgcac
    16561 cgcgacaggc ccgcctgtcg gtgacgttcg cgctgtgagc ggcgccgtgc tcgagtggac
    16621 cgccgcgctg tgcagcatcc tcggcgtctg gctgatggcc cggcgccggc tgtcggcatg
    16681 gccggtgggt ttgctgtcgg tgacgttgta cgggctggtg ttcgccgagg ccaagctgta
    16741 ctcggacacc ctgctgcagg tcgccttcgg cggcttcctg gtctacggct ggctcaactg
    16801 gcgccagcac gcggccgacg agggcagcgt ccgcatcgtg ccgctggcgc gcggcaagct
    16861 gctgcgcgac ctggccatcg ggctgtgcgg cggcgtggcg ctgggcgcgg ccatgcacac
    16921 cttcaccgat gccgcactgc cgtggctgga cgcgatgctg accgcgctga gcctggtcgg
    16981 ccagtggtgg caggcgcgcc gccacgtggc gtgctggtgg gtgtggatcg cagtggacgt
    17041 ggtctatgtg ggcgcctacc tgttcaagtc gctgcacgtg accgcggcgc tgtacgtctt
    17101 cttcctcggc ctggccgtgt tcggcctgcg cgcgtggagc gcggccgcgc gcgagccaca
    17161 gggtgcaccc gtacgttgat gaggagggcc aggctgtgcg ctggccatcc acagtagagc
    17221 cacgccatgc gtggctgagg ggtcaccaat aggcgcatcc acgcagggcg tggccctact
    17281 tcggttccag tgccaggccc agccgcagcg gctggcgcat gtccggcggt ggcgcctgca
    17341 ggggtgcggc cagcagcgcc gcgcgcagat ccgcgtccac ctgccggtcg cccaggctgt
    17401 cgaattccag tttcgagatg cggccatcgg cggcgatcca cacgctgacc ggcaacggtg
    17461 tcggcgtgtc cggatgcgcc tgcagccatt ccagcacacg ctgggcctgc gggtcctgct
    17521 ccagctgcag gcgctgctgc agctggccgc ccacggcggc ggcataggcc atccagtgcg
    17581 caggagcgtc ctgcgcggac acgctggcac tccccagtgc caacgcgccg aacaccgcgg
    17641 ccagcggacg ccaccagcgc cgcatgccgc ccttgttccc tgtcctggcc atcgcctgcc
    17701 tcctgcgctc ccatccagcg cgccatggtc ggcgtcgtag atgacaggc
//
LOCUS       DAOKIP010000070        17672 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.070,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000070 DAOKIP010000000
VERSION     DAOKIP010000070.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 17672)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17672)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17672
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.070"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..283)
                     /locus_tag="QEL58_001987"
     CDS             complement(<1..283)
                     /locus_tag="QEL58_001987"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017157132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676465.1"
                     /translation="MAMLRLRITGTEDDARAISDLLLGLEGIEHVEETDDLMPHMDDD
                     DSSSAGLSDDIGPGIHELEVEVGNESTAQKVRDAVQELALELDVFVEYET"
     gene            complement(353..1297)
                     /locus_tag="QEL58_001988"
     CDS             complement(353..1297)
                     /locus_tag="QEL58_001988"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019337623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDS1676466.1"
                     /translation="MQLRPSLLPALAVFAVAARHQNFAQAAQELHLTASAVSHHVRRL
                     EEVLETRLFLRHARGVRLTAEGRQLADAASAAFTDVAAVAHHLHPAADSVPLRITTLR
                     SLSYCWLLPRLPRFTQAHPHIRIELHTGSGLDRYDDNGPEVGIRYGLGQWPGLRAQHL
                     MDDYLFPVASPALAGVESLADPARIAGLPLLTDLSPQGWRDWFRHAGVRPPSPLPPMH
                     TFADSTDAMRAAVYGMGAVLARTHIAQPYLQRYEVVRLPGPALKARYAYHVVHAEGQP
                     PSQAARLFIDWLLEQAQDERTPIPALPDSLLGRPPTHA"
     gene            1413..2285
                     /locus_tag="QEL58_001989"
     CDS             1413..2285
                     /locus_tag="QEL58_001989"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HDS1676467.1"
                     /translation="MNAVPQAAERDWRTPLELTLLGAIWGCSFLFMRVAVPSFGPFAL
                     VEVRLVLGALVLLPFLWRARAQFPPRRWLWLAPIGLINSALPFVLFAYAAEQAPAAIG
                     AICNAMTVLFAALIAFLFFGEKIGMRRAGALLVGFAGVVVLATAKVSGLSIGTAVIAG
                     AAASLLYGLGVNLVKRHMTGLPSAAAAAATLSCASLWMLPMAVSHWPQAAIPLKAWGA
                     AIALGVACTGLAFLMFYRLIGRIGPSRASTVTYLIPLFGAAFAWLFLGEAVTVQMLIA
                     GALILGSVAVSQKG"
     gene            complement(2874..3776)
                     /locus_tag="QEL58_001990"
     CDS             complement(2874..3776)
                     /locus_tag="QEL58_001990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014036488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HDS1676468.1"
                     /translation="MPHRRRLALTALALACLLPTLASAATPYRSPQQILDASAASDWR
                     TPDPANLLYMDLPAGRVIIELAPQFAPRHVANIQTFAHEHFWDGTSIYRSQDNFVVQF
                     GDADADDAAKAKPFGSAARKLPAEFERASAGLKVSVLPDRDGWAAQTGFVDGFPVGQD
                     PQAGKAWLAHCYGMLGAGRSNEEDSSIGAELYVVTGQSPRQLDRNITLVGRVLKGMEL
                     LSATPRGPAPMGFYTDPKLRTPIVSIRRASDVPAAERTPIQVLRTDSKTFADTVEARR
                     NRVDDFYKRPAGHIDLCNIPVPVK"
     gene            3912..4277
                     /locus_tag="QEL58_001991"
     CDS             3912..4277
                     /locus_tag="QEL58_001991"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004150914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HDS1676469.1"
                     /translation="MVEDDVHLKKFQKELSAGTVSLALLAVLARAGQPLYGYLIAKEL
                     ERVGEGVLSGKQSALYPVLRNLEGAGLLESHVEPSSSGPPRRYYRINERGREVLAQWR
                     QAWQATRDSVDSVLEGVPQ"
     gene            4274..5263
                     /locus_tag="QEL58_001992"
     CDS             4274..5263
                     /locus_tag="QEL58_001992"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005408727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor domain-containing protein"
                     /protein_id="HDS1676470.1"
                     /translation="MNDPSLAGRALPTTIPQYLAQLRAALEGADPAMVQDALYDAEEY
                     LRSELAAQPGRSEAEVIADVAGSYGAPDEVAEIYRETEVTVNRALRTPRADTSPVLRA
                     AAEASGVEPAAPPPAPVQRSLLARFFGVVADPHTYGALFYMLLSLATGIFFFTWVVTG
                     LSLSLGLLILIIGIPLTVLFFGSVRGLALLEGRLVEALLGERMPRRPRYTDRSRTWLQ
                     RIGDMFTDGRTWLTLLYFVLMLPLGIIYFTIAVTLLSLSLGMIWAPVAAIFSGDIPGI
                     YVDGVNVLPMAASPLVAIVVAAVGALLLLLTMHLARGIGKLHGLIAKNLLVRL"
     gene            complement(5464..6771)
                     /gene="phaZ"
                     /locus_tag="QEL58_001993"
     CDS             complement(5464..6771)
                     /gene="phaZ"
                     /locus_tag="QEL58_001993"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019337629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyhydroxyalkanoate depolymerase"
                     /protein_id="HDS1676471.1"
                     /translation="MLYQLHELTRNLLAPWVHQAQANAKFFANPGHWWSQMPGADRLA
                     AVNELFHRIGKDYEKPEWGINEIDVDGERVPIVVHEEVSKPFCKLLRFKRHSNEADQL
                     HTMLNQPFVLVVAPLSGHHATLLRDTVRTLLRDHRVYVTDWVDARMVPSSEGEFGLDD
                     YIAYIQEFIRHLGVERLHVVSVCQPTVPVLAAVSLMASRGEPTPRTLVMMGGPIDARC
                     SPTAVNNLATQNPLSWFENNVIHTVPPSYPGAGRRVYPGFLQHAGFLSMNPSRHFSSH
                     WDFYTDLVKGDLEDADAHRRFYDEYNAVLDMPAKYYLDTIRVVFQDFLLPRGEWVVNG
                     EKVDPSAIRDTALLSIEGELDDIAGLGQTEAAQALCTGISAERREHFIVEGAGHYGIF
                     SGRRWREVVYPKVRDFFAAHAEAPAAKATKKKSNVTPLRRKAG"
     gene            complement(6865..7455)
                     /locus_tag="QEL58_001994"
     CDS             complement(6865..7455)
                     /locus_tag="QEL58_001994"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HDS1676472.1"
                     /translation="MDKTYDAAYFQRWYRRADIGGSARLARKVALAVASAEYYLERPI
                     RSVLDIGCGEGAWRAPLLKLRPKVEYLGFDSSEYAVRRYGRTRNLHLASFGDFAWLRP
                     CAPVDLLVCSDVMHYVPDRELRAGLAGVAELTGGVAFLETFAAEDAFEGDHDGFQARP
                     ARWYRRAMARHGLQPVGSHCWLGPALAGDTAALERM"
     gene            7605..8060
                     /locus_tag="QEL58_001995"
     CDS             7605..8060
                     /locus_tag="QEL58_001995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016902407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CopD family protein"
                     /protein_id="HDS1676473.1"
                     /translation="MQSYYWVKTFHIVFVVAWMATVFYLPRILVNLAETAGQPAVTER
                     LQLMGLRLYRFGHSMFGLAFLLGLVLWLGYKVIPDFPTMVAPGGAGWLHAKLGLVVVL
                     LAYFIWIGRLLKGVAKGRALPSSRALRWINEIPLLAFIPIVWLVLAKPF"
     gene            complement(8405..9364)
                     /locus_tag="QEL58_001996"
     CDS             complement(8405..9364)
                     /locus_tag="QEL58_001996"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyltransferase
                     subunit alpha"
                     /protein_id="HDS1676474.1"
                     /translation="MNPNYLDFEQPIADLEAKIQELRNASAGPAVNVEAEVHALQDKL
                     RMRTAQIFRNLTSWQVLQLARHPSRPYTADYIRIICDEFQELAGDRAFADDKAIMGGL
                     ARINGRAVMVIGHQKGRDTKEKIKRNFGMPKPEGYRKALRLMKMAERFGLPVLTLIDT
                     AGAWPGIDAESRGQSEAIARNLIEMAELKVPIICTVIGEGGSGGALALGVGDRTVMLE
                     YSVYSTITPEGCASILWKDAGKAKDAAEQLGLTAPRLKSLGLVDKVVREPTGGAHRNP
                     MQMAKRLKAVLLNELDALEKLPTEQLLEQRYTRLRSYGTYEAA"
     gene            complement(9498..13088)
                     /gene="dnaE"
                     /locus_tag="QEL58_001997"
     CDS             complement(9498..13088)
                     /gene="dnaE"
                     /locus_tag="QEL58_001997"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004150958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HDS1676475.1"
                     /translation="MSNSRFVHLHVHTEFSLADSTIRVPAKPDQADPKKAKQANLLSR
                     SVELGLPALAVTDLNNLFALVKFYKAAEGVGIKPIAGADVLIAEEGQDPWRMTLLCRD
                     REGYLSLSRLLTRAWMEGHRPEGGVAVHPDWLKAGNANLFALAGRQSLAGRLALDGKH
                     ELAEQQLADWQRVFGDGLHLELTRTGREGEETFNQFALMAAGQRGLPVVASNDVRFLS
                     PSDFSAHEARVCISTGRVLDDPKRPREYSDQQYLKSAEEMCALFADIPDAIDNTLALA
                     ERCNIEMRLGTYFLPNYPVPDDETLDTWIQKMSRDGLEERLEKNPLAPGKTREEYFER
                     LEFELNTIIKMGFPGYFLIVADFIQWGKNQGIPIGPGRGSGAGSLVAWALKITDLDPL
                     PYNLLFERFLNPERVSMPDFDIDFCMDRRDEVIDYVARKYGRERVSQIITYGTMAAKA
                     VVRDSGRVLGFPYGLVDGVSKLIPNILGIHLKDALGKGKEGPSSEMASAELIQRYETE
                     DDVRDLIDLALQLEDLTRNAGKHAGGVVIGPEPLSEFCPLYAEHDENGLGKNPVTQFD
                     KNDVEEVGLVKFDFLGLRTLTIIDWAVKAINKRHERAGIPPVDIAAIPLDDTPTYKDI
                     FANGNTGAVFQFESSGMRRLLKDARPDRFEDLIALVSLYRPGPMDLIPSFNARKHGQE
                     EIIYPDPRTEAILKDTYGIMVYQEQVMQMAQIVGGYSLGGADLLRRAMGKKVPAEMAK
                     HREIFREGAAKDGVDEAKADAIFDLMEKFAGYGFNKSHAAAYALVSYQTAWLKRHYPA
                     EFMAATLSSDLDNTDKVVGFLDEVRNLGLTVLPPKVNQSAFMFEAVTPDTIQYGLGAI
                     KGVGQGACEAVVDERLKGGQYKDLLDFCTRVGSAKLNRRTLEAMINCGALDELGHNRA
                     SLMLQLPEVIKATDQMARERASGQNSLFGGPDPSATTIQLDLPQADEWPLLQRLNGER
                     DTLGFYLSGHPFDPWRDDVRDLVGNDLGSVEKIWSANSGGGGGGEKRWRPEVQTVLAG
                     QVVGVRRKGESQIFIQLEDGRGRVECSAFSDAMAEFGHLMTKDRILVVKGGLREDEFN
                     GGFALRIRQVWDFDEVCANYATRLSLRLDLRQQRPVWERIDALLDRHRPGRTPLRLDL
                     LLKGPQGGVAGMLDVSGQSAVRIDSKLMEALRADPAVRTLKVRYSPPWAS"
     gene            complement(13358..14026)
                     /locus_tag="QEL58_001998"
     CDS             complement(13358..14026)
                     /locus_tag="QEL58_001998"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010486345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HII"
                     /protein_id="HDS1676476.1"
                     /translation="MSRRHAAAASLALFDGTAVVEPERLIAGVDEAGRGPLAGPVAVA
                     AVVFDPARPRINGLDDSKQLAAARREQLHDRIIERALAWHVVLVDVDTIDRLNIYQAT
                     LQGMREVVAAVAHVAGFARIDGNVVPKGLVLPAQALVGGDGIDRAIMAASILAKVSRD
                     RYMQDVHARHPQYGFEQHKGYGTPAHLAALREHGPCVEHRRSFAPVRECLEAPQGAAT
                     LATT"
     gene            complement(14023..15282)
                     /gene="lpxB"
                     /locus_tag="QEL58_001999"
     CDS             complement(14023..15282)
                     /gene="lpxB"
                     /locus_tag="QEL58_001999"
                     /EC_number="2.4.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005415843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid-A-disaccharide synthase"
                     /protein_id="HDS1676477.1"
                     /translation="MSSTTGQAPAGAAVIPLASMAGSVPAQRVLSERPLRIALVAGEA
                     SGDLLGAGLVRELKARFPNAEFAGIGGDAMRSAGCQTWHDASELAVMGLTEVLRHLPR
                     LLKLRSAFRQRALEWQPDVFIGIDAPDFNLGIERWLKQRGVRTVHYVSPSVWAWREKR
                     AEKIGNSADLVLCLFPMEPPIYARHGIDARFVGHPMADDIPLQGNREEARAALGLPTS
                     AKVLAVLPGSRLGEISRLGEPFFEAAWQVSERIPGLHVVVPAANPACRQLIEEQLSRS
                     ALPVAYSHVLDGQARNAMIAADVVVLASGTATLEAMLVKRPMVVGYRVNELTYRLVKA
                     LGLIKVDRFALPNILAGQDLAPELMQHDCTPDKLAAAIQQWFDHPQRAADLQGTYARL
                     HERLRRNASARAADAVGELLMRDQAKA"
     gene            complement(15279..16070)
                     /gene="lpxA"
                     /locus_tag="QEL58_002000"
     CDS             complement(15279..16070)
                     /gene="lpxA"
                     /locus_tag="QEL58_002000"
                     /EC_number="2.3.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014507232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-ACP--UDP-N-acetylglucosamine
                     O-acyltransferase"
                     /protein_id="HDS1676478.1"
                     /translation="MTDNAPRIHPTAVIDPAARLADDVQVGAFSLIGADVEIGAGTVV
                     GPHCSIHGPTRIGRDNRFIGHAAIGGEPQDKKFAGERSELVIGDRNVFREFVTVNRGT
                     GGGGGITTIGDDNWMLAYTHVAHDCHVGNFCVFSNNTTLAGHVIVGDYVIISGFAGAH
                     QFCRIGAHAFLGMGALTNGDVPPFTMVGTDSLGRPRGINSEGLKRRGFDAERISAIKR
                     AYRTLYVAGLPLAEAKVQLTEQARASDDVKAMLDFIEHAERPLLR"
     gene            complement(16087..16545)
                     /gene="fabZ"
                     /locus_tag="QEL58_002001"
     CDS             complement(16087..16545)
                     /gene="fabZ"
                     /locus_tag="QEL58_002001"
                     /EC_number="4.2.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-ACP dehydratase FabZ"
                     /protein_id="HDS1676479.1"
                     /translation="MNDTLQLPIDVCQIQELLPHRYPFLLVDRVLELDIEAKRILAQK
                     NVSINEPFFQGHFPGRPIMPGVLIIEALAQAGGVMTQLTLGRDSQSKLFYMVKVENAR
                     FNKQVVPGDVLMLDVQMKRLIRNMGWYYGEAKVNGEVVASAEVMCAGAKG"
     gene            complement(16542..17564)
                     /gene="lpxD"
                     /locus_tag="QEL58_002002"
     CDS             complement(16542..17564)
                     /gene="lpxD"
                     /locus_tag="QEL58_002002"
                     /EC_number="2.3.1.191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014036500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-(3-hydroxymyristoyl)glucosamine
                     N-acyltransferase"
                     /protein_id="HDS1676480.1"
                     /translation="MNTPTYTAQQLAEQFGLQVHGDPATAIHGVATLAHAGPGQLTFL
                     SNPRYRAQLADSQASLVVLRADDAEAAPGAALVAKDPYTAFAKIAALFDIAPTRPPGI
                     HPSAAIDPTAQVAASAHIGPFVSIGARSVVGENCIIGTGSVIGEDCSLDSGCELIARV
                     TLVTRVRLGKRVRVHPGAVLGADGFGLAMDAGKWIKVPQLGGVRIGDDCEIGANTCVD
                     RGALEDTVLDDDVRLDNLVQIAHNVQIGAHSAIAGCTGIAGSAKIGRYCLLGGHVGVV
                     GHLEICDKVVITGKSVVRNSIHEPGEYSSGTPLTDNRTWRKNAARFKQLDALARRVLA
                     AGKEKE"
BASE COUNT         2671 a         5751 c         6159 g         3091 t
ORIGIN      
        1 cggtttcgta ttcgacgaac acgtccagct cgagtgccag ttcctgcacc gcatcgcgca
       61 ccttctgcgc ggtgctttca ttgccgactt ccacttccag ttcgtggatg cccgggccga
      121 tgtcatcgga cagcccggcc gaactcgaat cgtcgtcgtc catgtggggc atcaggtcgt
      181 cggtttcctc gacgtgttcg atgccctcca ggccgagcag caggtcgctg atggcgcggg
      241 cgtcgtcttc ggttccggtg atgcgcagtc gcagcatggc catggcatgg gtacgttgtg
      301 gggttcgaca gcagcctagc cagcgcgaag caaagagcgg gtgagggcgc agtcaggcgt
      361 gcgtgggtgg gcgtcccagc aggctgtctg gcaaggcggg aatcggcgtg cgttcgtcct
      421 gcgcctgctc cagcaaccag tcgatgaaca ggcgcgcggc ctggcttggc ggttgccctt
      481 ccgcgtgcac cacgtgatac gcgtagcgcg ccttcagcgc cggtccgggc aggcgcacca
      541 cctcgtagcg ctgcaggtag ggctgggcga tgtgggtgcg cgccagcacc gcgcccatgc
      601 cgtacaccgc ggcgcgcatc gcatcggtac tgtcggcgaa ggtatgcatc ggcggcagcg
      661 gcgagggcgg gcgcacgccg gcatggcgga accagtcgcg ccaaccctgc ggcgacagat
      721 cggtcagcag cggcaggccg gcgatgcgtg ccggatcggc cagggattca acgccggcca
      781 gcgccggtga tgccaccggg aacaggtagt cgtccatcag gtgctgcgcg cgcaggccgg
      841 gccactggcc cagcccataa cggatgccga cttccgggcc gttgtcgtcg tagcgatcca
      901 gcccgctgcc ggtatgcagc tcgatgcgga tgtgcgggtg ggcctgggtg aagcgcggca
      961 gcctgggcag cagccagcag tacgacaacg agcgcagcgt ggtgatccgc agcggcacgc
     1021 tgtccgcagc gggatgcagg tggtgggcga cggcggcaac atcggtgaag gcggcgctgg
     1081 cggcgtcggc cagctggcgg ccctcggcgg tcagccggac cccgcgcgca tggcgcagga
     1141 acaggcgcgt ctccagcact tcctccaggc ggcgcacatg atggctgacc gcgctggcgg
     1201 tcaggtgcag ttcctgcgcg gcctgggcga agttctggtg gcgcgcggcg accgcgaata
     1261 cggccagcgc cgggagcagg gaggggcgta gctgcatgtc cagcctcaaa ccatatttgt
     1321 ggctggcagc gatactacgc gcttgtgcgg cgggcgtctt cgcccgatcc tgtgtgcctt
     1381 ggcgaggaac cgacgatgga cggaggcagg gcatgaacgc ggtcccacag gcggccgagc
     1441 gcgactggcg cacgccgctg gaattgaccc tgctgggcgc catctggggt tgctcgttcc
     1501 tgttcatgcg ggtggcggtg ccgtcgttcg gcccgttcgc gctggtcgag gtgcggctgg
     1561 tactgggcgc gctggtgctg ctgccgttcc tgtggcgtgc ccgcgcgcag tttccgccgc
     1621 ggcgctggct gtggctggcc ccgatcggcc tgatcaactc ggcgctgccg ttcgtgctgt
     1681 tcgcttatgc cgccgaacag gcaccggccg cgatcggtgc gatctgcaat gcgatgacgg
     1741 tgctgttcgc cgcgctgatc gccttcctgt tcttcggcga gaagatcggc atgcgccgtg
     1801 ctggcgcgct gctggtcggt tttgccggcg tggtggtgct ggccacggcc aaggtgtcgg
     1861 gcctgagcat cggcaccgcg gtgatcgccg gcgctgcggc gtcgctgctg tacgggttgg
     1921 gcgtaaacct ggtgaagcgg cacatgaccg gcctgccgtc ggcggccgct gctgcggcga
     1981 cgttgtcgtg cgcttcgctg tggatgctgc caatggcggt gagccactgg ccacaggcgg
     2041 cgattccgct caaggcgtgg ggtgcggcga ttgccctggg cgtggcctgc accggcctgg
     2101 cgttcctgat gttctaccgc ctgatcggtc gcatcggccc gtcgcgcgca tcgacggtga
     2161 cctacctgat tccgctgttc ggcgcggcgt tcgcgtggtt gttcctgggg gaggcggtga
     2221 cggtgcagat gttgattgcc ggtgcgttga ttctggggag cgtggcggtg agccagaagg
     2281 gctgagggcg tcgacgcact ggtagtgccg ggcgctgccc ggcagctctt ttccgcgcct
     2341 gcggggaggt gtcactttct ttgctcgtgc aaagaaagta accaaagaaa cacgccgcca
     2401 ggtcgcgagc cggtgctgcg caccggtacc ctgtgctcct cggtccgtcg agggacggcg
     2461 cgggaactcg ctgcgctcag acacccgcgc ctcttcgccc tcgccggacc tgcggtgctc
     2521 ggctcgctca aggcggaccc aacgtccaaa gcgaccgcat cattcgccgt gcatggtccg
     2581 gcactgtcgc tgctcgcact cgcggctgtg gcctttgatc tgggtccgcc ttgagcgagc
     2641 cgagcatcgc aggggaatca ggggcgaaga ggtgccgatg tctgagcgca gcgagttcgg
     2701 caccgtcccc tgattcaccg agaagcgcag ggtaccgacg tgcgaagcac ggcggctcgc
     2761 ggtgtggcgg cgcgtttctt ttggttactt ttcttttcgc gcgaaaagaa aagtgacgcc
     2821 catgaacgat gaagcgcctt cagcacgcgc cacgcgcaga acctgcgacg gcgttacttc
     2881 accggcaccg gaatattgca aagatcgata tgccccgccg ggcgcttgta gaaatcgtcc
     2941 acgcgattgc gccgcgcctc caccgtatcg gcgaaggtct tcgaatcggt acgcagcacc
     3001 tggatcggcg tgcgctcggc cgccggcacg tcgcttgcac ggcggatcga cacgatcggc
     3061 gtacgcagct tcgggtcggt gtagaaaccc atcggtgccg gtccgcgcgg ggtcgcgctg
     3121 agcagctcca tgcccttcag cacgcggccg accagggtga tgttgcggtc cagctggcgc
     3181 ggcgactgcc cggtcaccac gtacagttcg gcgccgatgc tgctgtcttc ctcgttgctg
     3241 cggccggcgc cgagcatgcc gtagcagtgc gccagccagg ccttgccggc ctgcggatcc
     3301 tggccgaccg ggaagccgtc aacgaagccg gtctgcgccg cccagccatc gcggtccggc
     3361 aacacgctca ccttcaggcc tgcgctggcg cgttcgaatt cggccggcag cttgcgtgcg
     3421 gcgctgccga acggcttggc cttggccgcg tcatcggcgt cggcatcgcc gaactgcacc
     3481 acgaagttgt cctgcgaacg gtagatgctg gtgccgtccc agaagtgctc gtgggcgaaa
     3541 gtctggatgt tggcgacatg gcgcggggcg aactgcggcg ccagttcgat gatcacccgg
     3601 ccagccggca ggtccatgta gagcaggttg gccgggtccg gcgtgcgcca gtcgctggcc
     3661 gccgacgcgt cgaggatctg ctgcgggctg cggtagggcg tggccgcgct ggccagggtg
     3721 ggcagcaggc aggccagggc gagggcggtc agggcaaggc gacgacggtg cggcatggga
     3781 accccggaaa tgaacgaggc ttcgattctg cgcgagcgtc ccggccacgc caaccggcac
     3841 gatgactaac gacacattcg ctataccgaa cttcgcacta ctgttgactt caacgtagtg
     3901 gagggccggt catggtcgaa gacgatgtcc acctgaagaa gttccagaag gagctgagcg
     3961 ctggaaccgt gtcgctggcc ctgctggcgg tgctcgcccg ggccgggcag ccgctgtacg
     4021 gctacctcat tgccaaggag ttggagcggg tgggcgaggg cgtgctgagc ggcaagcaga
     4081 gcgcgctgta cccggtgctg cgcaacctgg aaggggccgg cctgctggaa agtcatgtcg
     4141 agccgtccag cagcgggccg ccgcggcgct actaccgcat caatgaacgt ggccgcgagg
     4201 tgctggcgca atggcgccag gcctggcagg ccacccgcga ttccgtcgat tccgtgttgg
     4261 agggggtacc gcaatgaacg acccgagcct ggcaggccgt gccctgccga ccaccattcc
     4321 gcagtacctg gcgcagctgc gcgcggcgct ggaaggcgct gatcccgcca tggtgcagga
     4381 cgccctgtac gacgccgagg agtacctgcg ttcggagctg gcggcgcagc ccggccgcag
     4441 cgaggccgag gtgatcgccg acgtcgccgg cagctatggc gcgccggacg aagtggccga
     4501 gatctaccgc gagaccgaag tgacggtgaa ccgcgcgctg cgcacgccgc gtgcggatac
     4561 ctcgccggtg ctgcgtgcgg cagccgaggc cagtggcgtc gagccggccg caccgccgcc
     4621 ggcgccggtt cagcgctcgc tgctggcgcg cttcttcggc gtggtggcgg atccgcatac
     4681 ctacggcgcg ctgttctaca tgctgctgtc gctggccacc ggcatcttct tcttcacctg
     4741 ggtggtgacc ggcctgtcgc tgtcgctggg cctgctgatc ctgatcatcg gcattccgct
     4801 gaccgtgctg ttcttcggct cggtgcgcgg gctggcattg ctggaagggc ggctggtgga
     4861 agcactgctg ggcgaacgca tgccgcgccg tccgcgctac accgaccgca gccgcacctg
     4921 gctgcagcgt atcggcgaca tgttcaccga tggccgcacc tggctgaccc tgctgtattt
     4981 cgtgctgatg ctgccgctgg gcatcatcta cttcaccatc gcggtgacgc tgctgtcgtt
     5041 gtcgctgggc atgatctggg caccggtggc ggcgatcttc agcggcgaca tcccgggcat
     5101 ctatgtggac ggcgtgaatg tgctgccgat ggcggcctcg ccgctggtag cgatcgtggt
     5161 tgccgccgtg ggtgcgctgc tgctgctgct gaccatgcac ctggcacgcg gcatcggcaa
     5221 gctgcacggg ttgatcgcca agaacctgct ggtgcggctg taaccgggaa tccacgcttg
     5281 ggtgcgtgcc aacctcggtt ggcacgctcc atcagctatc gaaatgcctg acgggctcgg
     5341 ctttggtagg tgccaacctc ggttggcacg ctccatcaga tgccgggatt gacggtagag
     5401 cgccaaccaa ggttggcatc taccaagtcg taccgaccaa ggtcggcacc caccatgggc
     5461 gagttacccc gccttgcggc gcagtggggt cacgttgctc ttcttcttcg tggccttcgc
     5521 cgccggtgcc tcggcatgcg cggcgaaaaa gtcgcgcacc ttcgggtaca ccacttcgcg
     5581 ccaacggcga ccgctgaaga tgccgtagtg gccagcacct tcgacgatga aatgctcgcg
     5641 gcgttccgca ctgatgccgg tgcacagtgc ctgcgccgct tcggtctggc cgaggccggc
     5701 gatgtcgtcc agctcgcctt cgatgctcag cagcgcggta tcgcggatgg ccgacgggtc
     5761 gaccttctcg ccattgacaa cccactcgcc acgcggcagc aggaagtcct ggaacaccac
     5821 gcggatggtg tccaggtagt acttggccgg catgtccagc accgcgttgt actcgtcata
     5881 gaaacgacgg tgcgcgtcgg cgtcttccag gtcgcccttg accaggtcgg tgtagaaatc
     5941 ccagtgcgag ctgaaatggc ggctggggtt catcgacagg aagccggcat gctgcaggaa
     6001 gcccggatac acgcggcgac cggcgccggg gtagctgggc ggcacggtgt ggatgacgtt
     6061 gttctcgaac cacgacagcg ggttctgcgt ggccaggttg ttcactgcag tcgggctgca
     6121 gcgcgcatcg atcgggccgc ccatcatcac cagcgtgcgc ggcgtcggtt cgccacggct
     6181 ggccatcagc gaaaccgcgg ccagcaccgg cacggtcggc tggcacacgc tcaccacgtg
     6241 caggcgctca acgccaaggt ggcggatgaa ttcctggatg taggcgatgt agtcgtccag
     6301 gccgaactca ccttcgctgg acggcaccat gcgcgcatcc acccagtcgg tgacgtacac
     6361 gcggtggtcg cgcagcaggg tgcgcacggt atcgcgcagc agggtggcgt ggtggccgga
     6421 cagcggcgcg accaccagca cgaacggctg gttgagcatg gtgtgcagct ggtcggcttc
     6481 attgctgtgg cgcttgaagc gcagcagctt gcagaacggc ttgctcactt cctcgtgcac
     6541 gacaatcggc acgcgctcgc catcgacgtc gatttcgttg atgccccact cgggcttctc
     6601 gtaatccttg ccgatgcgat ggaacaactc gttgaccgcg gccaggcgat cggcacccgg
     6661 catctgcgac caccagtggc ccgggttggc gaagaatttg gcgttggcct gggcctggtg
     6721 cacccagggg gcgagcaggt tgcgggtcag ttcgtgcagt tgatagagca tgacgaccga
     6781 atatgtatgg tcatatgttg ccgcgcagca tatcccatcc gggtgtcccg caggttaagt
     6841 tggctgaaaa taatgaatcc ggattcacat ccgttccagc gcggccgtat cgcctgccag
     6901 ggcggggccg agccagcagt gcgacccgac cggctgcagg ccgtgccggg ccatcgcgcg
     6961 gcggtaccag cgtgccgggc gggcctggaa accgtcgtgg tcgccctcga atgcgtcctc
     7021 ggcggcgaag gtctccagga aggccacgcc gccggtcagc tcggccacgc cggccaggcc
     7081 ggcgcgcagc tcgcggtcgg gcacgtagtg catcacgtcc gagcagacca gcaggtcgac
     7141 cggggcacag ggccgcagcc aagcgaaatc gccgaagctg gccaggtgca ggttgcgggt
     7201 cctgccgtag cggcgcacag cgtactcgct gctgtcgaag ccgaggtatt cgaccttcgg
     7261 acgcagcttc agcagcggcg cacgccaggc gccttcgccg cagccgatat ccagcacgct
     7321 gcggatcggt cgctccaggt agtactcggc actggccacg gccaacgcga ccttgcgcgc
     7381 caggcgggcg ctgccgccga tgtcggcgcg gcggtaccag cgctggaagt aggcggcgtc
     7441 gtaggtcttg tccatggggc ggtgcatgat cggggaaaac ggcgcctatc gtacggtgtt
     7501 gcggcatgcc atgcgtcgat gtgtcgcggc gtgcgggcct gcagcggctt cgccacggca
     7561 tgcgagaatg accgcccatc tacgccagcc gccggagcaa gcgcatgcag agctactact
     7621 gggtgaagac cttccacatc gtgttcgtgg tggcgtggat ggcgacggtg ttctacctgc
     7681 cgcgcatcct ggtcaacctg gccgagaccg caggccagcc ggccgtgacc gagcgcctgc
     7741 agctgatggg cctgcgcctg taccgcttcg gccattcgat gttcggcctg gccttcctgc
     7801 tgggcctggt gctgtggctg ggctacaagg tcatcccgga tttcccgacc atggtggcgc
     7861 cgggcggcgc tggctggctg catgccaagc tggggctggt ggtggtgctg ctggcgtatt
     7921 tcatctggat cgggcggctg ctgaagggcg tggccaaggg ccgggcgctg ccgtcgtcgc
     7981 gcgcgctgcg ctggatcaac gagattccgc tgctggcgtt cattccgatc gtgtggctgg
     8041 tgctggccaa gccgttctga gatcccgcgt gctcgaacat gtcactttct tgctcgtgca
     8101 agaaagtaac caaagaacac gccgccgaac gcgagccggt gctgcgcacc ggttccctgc
     8161 gcttctcggt gaatcagggg acggcgccga aagccagccg actaacagtc ggctctacaa
     8221 gaagcagtgg cgcctcttcg cccctgattc ccctgcgatg ctcggctcac tcatggcgga
     8281 cccgaacgtc aacggccgca gctgcaccca gtagattcac gccatgctta ggtgctgtgc
     8341 gaggtacaga caaaaaaaag ccgggcatct gcccggctct tttttatccg acgtcaggta
     8401 gcgatcacgc ggcctcgtac gtgccgtagc tgcgcaggcg ggtgtagcgc tgttccagca
     8461 gttgttcggt gggcagcttt tccagcgcgt ccagttcgtt cagcagcacg gccttcaggc
     8521 gcttggccat ctgcatcggg ttgcggtggg cgccaccggt cggctcgcgc acgaccttgt
     8581 cgaccaggcc caggctcttc aggcgcgggg cggtcaggcc cagctgctcg gccgcgtcct
     8641 tggccttgcc ggcgtccttc cacaggatcg aggcgcagcc ttccggggtg atggtcgagt
     8701 acaccgagta ctccagcatc acggtgcggt cgcccacgcc cagcgccagc gcaccgccgg
     8761 agccgccttc accgatcacg gtgcagatga tcggcacctt cagttcagcc atctcgatca
     8821 ggttgcgtgc gatcgcttcg gactggccgc gcgattcggc gtcgatgccc ggccaggcgc
     8881 cggcggtgtc gatcagggtc agcaccggca ggccgaagcg ttcggccatc ttcatcaggc
     8941 gcagcgcctt gcggtaaccc tccggcttgg gcatgccgaa gttgcgcttg atcttttcct
     9001 tggtgtcgcg gcccttctgg tggccgatca ccatcaccgc gcggccgttg atgcgggcca
     9061 ggccgcccat gatggccttg tcgtcggcga aggcgcgatc accggccagt tcctggaact
     9121 catcgcagat gatgcggatg tagtcggcgg tatacgggcg cgacgggtgg cgggccagct
     9181 gcagcacctg ccacgaggtc aggttgcgga agatctgcgc ggtgcgcatg cgcagcttgt
     9241 cctgcagcgc gtgcacttcg gcctcgacat tgaccgccgg cccggcactg gcgttgcgca
     9301 gctcctggat cttggcttcc aggtcggcga tgggttgctc gaagtcgagg tagttcggat
     9361 tcatcggaag ccgtcgtgta aagaagaggg gaattctagc cgaatgcgtg caaaccgccc
     9421 gtacgccctc gtctggaagg cgacggtagc gcagccgggc agggggcgcc agtcagcccg
     9481 gggcgcgggc cacagcctca gctggcccac ggcgggctgt agcgcacctt cagcgtgcgc
     9541 acggccggat cggcgcgcag cgcctccatc agcttggagt cgatgcgcac cgcgctctgc
     9601 ccggagacat caagcatgcc ggccacgccg ccctgcgggc ccttcagcag caggtccagg
     9661 cgcagcgggg tgcgccccgg gcgatggcga tcgagcaggg catcgatgcg ttcccagacc
     9721 gggcgctgct ggcgcaggtc caggcgcagc gacagccgcg tggcgtagtt ggcgcagact
     9781 tcgtcgaaat cccagacctg gcggatgcgc agcgcgaagc cgccgttgaa ctcgtcctcg
     9841 cgcaggccgc ccttgaccac caggatgcgg tccttggtca tcaggtggcc gaactcggcc
     9901 atcgcgtcgg agaacgcgct gcactcgacg cggccgcgac cgtcctcaag ctggatgaag
     9961 atctggcttt cgcccttgcg gcgcacgccg accacctggc cggccagcac cgtctgcact
    10021 tccgggcgcc agcgcttctc gccaccgccg ccaccgccgc tgttggcgct ccagatcttc
    10081 tccaccgaac ccaggtcgtt gccgaccagg tcacgcacat cgtcgcgcca cggatcaaac
    10141 gggtggccgc tgaggtagaa gcccagcgtg tcgcgctcgc cgttcaggcg ctgcagcaac
    10201 ggccattcat cggcctgggg caggtccagc tggatcgtgg ttgcactcgg gtcggggccg
    10261 ccaaacagcg agttctggcc ggacgcgcgc tcgcgtgcca tctggtcggt ggccttgatc
    10321 acctccggca gctgcagcat cagcgaggcg cggttgtggc cgagctcgtc cagcgcgccg
    10381 cagttgatca tcgcttccag cgtgcgccgg ttgagcttgg ccgagccgac acgggtgcag
    10441 aagtcgagca ggtccttgta ctggccgccc ttcaggcgtt cgtcgaccac ggcttcgcag
    10501 gcaccctggc caacgccctt gatcgcgccc aggccgtact ggatggtgtc cggcgtcacc
    10561 gcttcgaaca tgaaggccga ctggttcacc ttcggcggca gcacggtcag gccgaggttg
    10621 cgcacctcgt cgaggaagcc caccaccttg tcggtgttgt ccaggtccga ggacagcgtg
    10681 gccgccatga actcggccgg gtaatggcgc ttcagccatg cggtctggta gctgaccagc
    10741 gcgtaggcgg cggcgtgcga cttgttgaaa ccgtagccgg cgaacttctc catcaggtcg
    10801 aagatcgcat cggccttggc ctcgtccacg ccgtccttgg ccgcgccttc gcggaagatc
    10861 tcgcggtgct tggccatttc cgccggcacc ttcttgccca tcgcgcggcg cagcaggtcg
    10921 gcgccgccca gcgagtagcc gccgacgatc tgcgccatct gcatcacctg ctcctggtac
    10981 accatgatgc cgtaggtgtc cttcaggatc gcttcggtac gcggatcggg atagatgatt
    11041 tcttcctggc cgtgcttacg cgcgttgaag gaaggaatca ggtccatcgg gccggggcgg
    11101 tacagcgaca ccagcgcaat caggtcttcg aaacggtcgg ggcgcgcgtc cttcagcagg
    11161 cggcgcatgc ccgaggattc gaactggaac accgcgccgg tattgccgtt ggcgaagatg
    11221 tccttgtagg tgggcgtgtc gtccagcggg atcgcggcga tgtccaccgg cgggatgccg
    11281 gcgcgctcat ggcgcttgtt gatcgccttc accgcccagt cgatgatggt cagcgtgcgc
    11341 aggccgagga agtcgaactt caccaggccc acttcttcca cgtcgttctt gtcgaactgg
    11401 gtgaccgggt tcttgccgag cccgttctcg tcatgttcgg cgtacagcgg gcagaactcg
    11461 ctcagcggct ccggcccgat caccacgcca ccggcgtgct tgccggcgtt gcgggtcagg
    11521 tcttccagct gcagcgccag gtcgatcagg tcgcggacat cgtcctcggt ctcgtagcgc
    11581 tggatcagtt cggccgaggc catttccgag ctggggcctt ccttgccctt gcccagcgca
    11641 tccttcaggt ggatgccgag gatgttcgga atcagcttgg aaacgccgtc gaccaggccg
    11701 tacgggaagc cgagcacgcg gccggagtcg cgcaccaccg ccttggcggc catggtgccg
    11761 taggtgatga tctggctgac gcgctcgcgc ccgtacttgc gtgcgacgta gtcgatcacc
    11821 tcgtcgcggc gatccatgca gaagtcgatg tcgaagtcgg gcatcgacac gcgttccggg
    11881 ttcaggaagc gctcgaacag caggttgtac ggcagcgggt ccaggtcggt gatcttcagc
    11941 gcccacgcca ccagcgaacc ggcacccgaa ccacggccgg ggccgatcgg aatgccctgg
    12001 ttcttgcccc actggatgaa gtcggccacg atcaggaagt agcccgggaa gcccatcttg
    12061 atgatggtgt tgagttcgaa ctccaggcgc tcgaagtact cctcgcgggt cttgcccggc
    12121 gccagcggat tcttctccag gcgctcttcc aggccatcgc gcgacatctt ctggatccag
    12181 gtgtccaggg tctcgtcgtc cggcaccggg tagttgggca ggaagtaggt gcccagccgc
    12241 atctcgatgt tgcagcgctc ggccagcgcc agcgtgttgt cgatcgcatc ggggatgtcg
    12301 gcgaacagcg cacacatctc ctcggccgac ttcaggtact gctggtcgct gtactcgcgc
    12361 gggcgcttgg ggtcgtccag cacgcggccg gtggaaatgc acacgcgtgc ttcgtgcgcg
    12421 ctgaaatccg acggcgacag gaagcgcaca tcgttgctgg ccaccaccgg caggccgcgc
    12481 tggccggcgg ccatcagcgc gaactggttg aaggtttcct cgccttcgcg gccggtacgg
    12541 gtcagttcca ggtgcaggcc atcgccgaac acgcgctgcc agtcggccag ctgctgttcg
    12601 gccagctcat gcttgccgtc cagcgccagc cgcccggcca ggctctgccg cccggccagc
    12661 gcgaacaggt tggcgttgcc ggccttcagc cagtccgggt gcacggccac gccgccttcc
    12721 gggcgatgac cttccatcca ggcgcgggtc agcagccgcg acaggctcag gtagccctcg
    12781 cggtcgcggc acagcagggt catccgccac gggtcctggc cttcctcggc gatcagcacg
    12841 tcggcgccgg cgatcggctt gatgcccacg ccttcagcgg ccttgtagaa cttgaccagg
    12901 gcgaacaggt tgttgaggtc ggtcaccgcc agcgcgggca gcccgagctc gaccgagcgt
    12961 gacagcagat tggcctgctt ggccttcttc gggtccgcct ggtccggctt ggccggcaca
    13021 cggatggtcg agtccgccag cgagaactcg gtgtggacgt ggagatgtac gaagcgggag
    13081 ttggacatgc cggaccaggt tggagcgcgc gggccccggg tgccgacggg gaaatcgtcg
    13141 ccggggtcgg gaagcgctgg agtgcccggt cagggtagcg agggcagggg gtgccgacaa
    13201 gctcttgacg gcacgcgata tcgcattcgc gctattgctt cgcagggtcc gcaggcgaac
    13261 cgtgggcccg gtcccaccat gcttcccgac cccccgcgcc gtgggcgcgt ccccatgacc
    13321 cggggggact attccccagc gggattgcag cagccgttca ggtggtcgcg agggtggccg
    13381 ccccttgcgg cgcttccagg cattcgcgca ccggggcgaa gctgcggcgg tgttccacgc
    13441 aggggccgtg ttcacgcagg gccgccaggt gggccggggt gccatagccc ttgtgctgct
    13501 cgaagccgta ctgcgggtga cgagcgtgca cgtcctgcat gtagcggtcg cgcgagacct
    13561 tggccaggat cgacgcggcc atgattgcgc ggtcgatgcc atcgccgccg accagggcct
    13621 gcgcaggcag caccagcccc ttcggaacca cgttgccatc gatgcgggcg aagccggcca
    13681 catgggccac ggcggcgacc acctcgcgca tgccctgcag ggtggcctgg tagatgttca
    13741 ggcggtcgat ggtgtccacg tcgaccagca ccacatgcca ggccagggcc cgttcgatga
    13801 tgcggtcatg cagctgctcg cggcgcgcgg cggcgagctg cttggaatca tccaggccgt
    13861 tgatgcgtgg ccttgccggg tcgaacacca ccgcggcaac ggccaccggc ccggccagcg
    13921 ggccgcgccc ggcctcgtcg acgcctgcga tcaggcgctc cggctcgacc acggccgtgc
    13981 catcgaacaa ggccaggctc gccgccgcgg cgtggcgccg gctcatgcct tggcctggtc
    14041 gcgcatcagc agttcgccga ccgcatcggc ggcccgtgcc gaggcgttgc ggcgcaggcg
    14101 ttcatgcagg cgggcatagg tgccctgcag gtcggccgcg cgctgcggat ggtcgaacca
    14161 ctgctggatg gcggccgcca gcttgtccgg cgtgcagtcg tgctgcatca gttccggggc
    14221 cagatcctgg ccggccagga tgttgggcag cgcgaaacgg tcgaccttga tcaggcccag
    14281 cgccttgacc aggcggtagg tcagctcgtt gacgcggtag ccgaccacca tcgggcgctt
    14341 gaccagcatc gcttccagcg tggcggtgcc cgaggccagc acgaccacgt cggcggcgat
    14401 catcgcgttg cgcgcctgcc cgtcgagtac atgcgaatag gccaccggca gcgccgagcg
    14461 cgagagctgt tcttcgatca gctgcctgca cgccggattg gcggcaggca ccaccacatg
    14521 caggccggga atgcgttcgg agacctgcca ggcggcttcg aagaacggtt cgcccaggcg
    14581 cgagatctca cccaggcggc tgcccggcag caccgccagc accttggccg aggtcggcag
    14641 gccaagcgcg gcgcgtgcct cctcgcggtt gccctgcagc ggaatgtcgt cggccatcgg
    14701 atggccgaca aaacgcgcat cgatgccgtg cctggcgtag atcggtggtt ccatcgggaa
    14761 caggcacagc accaggtcgg cgctgttgcc gatcttttcg gcgcgcttct cgcgccaggc
    14821 ccagaccgag gggctgacgt agtgcacggt gcgcacgcca cgctgcttga gccagcgctc
    14881 gatgccaagg ttgaagtcgg gggcgtcgat gccgatgaac acatccggct gccattccag
    14941 tgcacgctgc cggaacgccg agcgcagctt cagcagtcgt ggcaggtggc gcagtacttc
    15001 ggtcagcccc atcaccgcca gttcgctggc gtcatgccag gtctggcagc cggcgctgcg
    15061 catcgcatcg ccgccgatgc cggcgaattc ggcgttcgga aagcgtgctt tcagttcacg
    15121 caccagcccc gcacccagca gatcgccgga cgcttcaccg gccaccagtg cgatccgcaa
    15181 cgggcgctcg ctgagcaccc gttgcgcagg gacgctgccg gccatcgagg ccagcggaat
    15241 cacagcggcg ccggccggcg cctggccggt cgtgctgctc atcgcagcaa gggcctctcg
    15301 gcgtgctcga tgaagtccag catcgccttc acgtcatcgc tggcacgcgc ctgttcggtc
    15361 agctgcacct tggcctcggc cagcggcagg cctgccacgt acagggtgcg gtaggcacgc
    15421 ttgatggccg agatgcgctc ggcatcgaaa ccgcggcgct tcaggccctc gctgttgatg
    15481 ccgcgcgggc ggcccagcga atcggtgccg accatggtga acggcggaac gtcgccattg
    15541 gtcagcgcgc ccatgccgag gaaggcgtgc gcgccgatgc ggcagaactg gtgggcaccg
    15601 gcgaagccgc tgatgatcac gtaatccccc acgatgacgt ggccggccag ggtggtgttg
    15661 ttggaaaaca cgcagaagtt gccgacatgg cagtcgtgcg ccacgtgcgt gtaggccagc
    15721 atccagttgt catcgccgat ggtggtgatg ccgccgccgc cgccggtgcc gcggttgacg
    15781 gtgacgaatt cgcggaacac gttgcggtcg ccgatcacca actcgctgcg ctcaccggcg
    15841 aacttcttgt cctgcggctc gccaccgatc gccgcgtggc cgatgaagcg gttgtcgcgg
    15901 ccgatccggg tcgggccatg gatgctgcaa tgggggccga ctaccgtgcc ggcgccgatt
    15961 tccacatcgg caccgatcag gctgaaggcg cccacctgca catcgtcggc caggcgtgcg
    16021 gccgggtcga tgacggcggt cgggtggatc cggggtgcgt tgtcagtcat tcctgcctcc
    16081 agtggatcag cccttggcgc cggcgcacat gacttcggcc gaggcaacga cttcgccgtt
    16141 gaccttggct tcgccgtagt accagcccat gttgcggatc aggcgcttca tctgcacatc
    16201 cagcatcagc acgtcgccgg ggacgacctg cttgttgaag cgggcgtttt ccaccttgac
    16261 catgtagaag agcttggact gcgagtcacg gccgagcgtg agctgggtca tcacgccacc
    16321 ggcctgggcc agcgcttcga tgatcagcac gccgggcatg atcgggcggc ccgggaagtg
    16381 gccctggaag aagggctcgt tgatgctcac gttcttctgc gccaggatgc gcttggcctc
    16441 gatgtcgagc tcaagcaccc ggtcgaccag caggaacggg taacggtgcg ggagcagttc
    16501 ctggatctgg cagacgtcga taggaagctg cagcgtgtcg ttcattcttt ctccttgcca
    16561 gcggccagga cgcggcgagc caatgcgtcc agctgcttga agcgcgcggc gttcttgcgc
    16621 cacgtgcggt tatcggtcaa cggggtgccg gacgagtact cgcccggctc atggatggag
    16681 ttgcggacca ccgatttgcc ggtgatcacg accttgtcgc agatctccag gtggccaacc
    16741 acgccgacgt ggccgccaag caggcagtaa cggccgatct tggcgctgcc ggcgatgcct
    16801 gtgcagccgg cgatggccga gtgcgcgccg atctgaacgt tgtgcgcgat ctgcaccagg
    16861 ttgtccaggc gcacgtcgtc gtccagcacg gtgtcttcca gcgcaccgcg gtcgacgcag
    16921 gtattggcgc cgatctcgca atcgtcgccg atgcgcacgc cgcccagctg cggcaccttg
    16981 atccacttgc cggcgtccat tgccaggccg aagccatcgg cgccgagcac ggcgccagga
    17041 tgcacgcgca cgcgcttgcc gagcctgacc cgggtgacga gggtgacccg cgcgatcagc
    17101 tcgcagccgc tgtcgaggct gcagtcttcg ccgatcacgc tgccggtgcc gatgatgcag
    17161 ttctcgccga ccacgctgcg cgcgccgatg gagacgaacg ggccgatatg ggcgctggct
    17221 gcaacctggg cggtggggtc gatggcggcg ctggggtgga tgcctggcgg ccgtgtcggc
    17281 gcgatgtcga acagcgcggc gatcttggcg aaggccgtgt acgggtcctt ggccaccagc
    17341 gcggcgcccg gggcggcctc ggcgtcgtcg gcacgcagca ccaccagcga ggcctggctg
    17401 tcggccagct gggcgcggta gcgcggattg gagaggaacg tcagctggcc aggaccggca
    17461 tgggcgaggg tggccacgcc atggatggcg gtggcggggt cgccatggac ctgcaggccg
    17521 aactgctcgg cgagttgctg ggcggtgtag gtgggagtat tcacggcggg agtttaacgt
    17581 gtgacgccat tgcggtcatg cggggcggtc atgcagccaa cggcggggcc cctcgcggcc
    17641 ggcagagcca gtcccatggg cttggtcgga cg
//
LOCUS       DAOKIP010000071        17327 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.071,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000071 DAOKIP010000000
VERSION     DAOKIP010000071.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 17327)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17327)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17327
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.071"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(50..1312)
                     /gene="fabF"
                     /locus_tag="QEL58_002003"
     CDS             complement(50..1312)
                     /gene="fabF"
                     /locus_tag="QEL58_002003"
                     /EC_number="2.3.1.179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019302031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase II"
                     /protein_id="HDS1676481.1"
                     /translation="MKRRVVVTGLGIVSPLGNDLASSWEGITHGRSGIGPLTNVADAY
                     LDRFTTKIAGEVKGFDITADNELFGKFRVSGKDAKKMDPFIHYGLGASFMALHDSGLE
                     ITEANADRMGAIVGAGIGGLLGIEEQTIEFHEGKKISPFYVPKTIINMLPGQLSIITG
                     LKGPSFSAVSACATSNHSIGTAMRMIQYGDADVMVVGGAERGSSPTAVGGFCAMKAMS
                     TRNDAPEQASRPWDKDRDGFVLGDGAGILILEEYEHAKARGAKIYCELAGFGASSDAY
                     HMTAPSENGEGAARCMVMAMKDAGVTPEQVGYLNAHGTSTPLGDLGETMAMKTAFGDH
                     AYKMMVSSTKSMTGHLLGAAGGVEAIFSVMALQDNVIPPTINLQQPGEGCDLDYVPNE
                     ARQAKVDVVMSNGFGFGGTNGTLIFKRI"
     gene            complement(1456..1695)
                     /gene="acpP"
                     /locus_tag="QEL58_002004"
     CDS             complement(1456..1695)
                     /gene="acpP"
                     /locus_tag="QEL58_002004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013535667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HDS1676482.1"
                     /translation="MSTIEERVKKIVVEQLGVKEEEVTNSASFVDDLGADSLDTVELV
                     MALEEEFECEIPDEEAEKISTVQAAIDYVKAHVKA"
     gene            complement(1848..2591)
                     /gene="fabG"
                     /locus_tag="QEL58_002005"
     CDS             complement(1848..2591)
                     /gene="fabG"
                     /locus_tag="QEL58_002005"
                     /EC_number="1.1.1.100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002814323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-ACP reductase FabG"
                     /protein_id="HDS1676483.1"
                     /translation="MSKPLQGEIALVTGASRGIGAAIADLLAAQGATVIGTATTESGA
                     AAIGERLAAHGGHGRALNVTDAAALDSVLDGIAKEFGPISILVNNAGITRDNLLMRMK
                     DEDWASIIDTNLTSVFRTSKAVMRGMMKARKGRIINIASVVGVTGNAGQANYAAAKAG
                     IIGFSKSLAKEIGSRGVTVNVVAPGFIDTDMTKALPEEARTALINDIALERLGSPEDI
                     AHAVAFLAGPAAGYITGETLHVNGGMYMP"
     gene            complement(2674..3618)
                     /gene="fabD"
                     /locus_tag="QEL58_002006"
     CDS             complement(2674..3618)
                     /gene="fabD"
                     /locus_tag="QEL58_002006"
                     /EC_number="2.3.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACP S-malonyltransferase"
                     /protein_id="HDS1676484.1"
                     /translation="MTVSTLAFVFPGQGSQSVGMVAELAELHPQVREAFTEASDGAGV
                     DLWALSQGGPEEMLNRTEYTQPALLAASIGVWRAWNAVGGPRPSVLAGHSLGEYTALV
                     AAGALSLHDGAHLVRLRGQLMQEAAPAGVGAMAAVLGAEDQLVLDVCAEAAGSQVVVP
                     ANFNSPGQIVIGGDADAVDRALALLAEKGVRKAVKLAVSVPSHTPLMREAANRLAEVM
                     AGLSWQAPQLPVVQNVDAKVHDGVDAIRTALVQQLYQPVQWTGCVQALAARGITQIAE
                     CGPGKVLTGLVKRIDKAIDGRSLATPGDFEAAREAWSA"
     gene            complement(3755..4537)
                     /locus_tag="QEL58_002007"
     CDS             complement(3755..4537)
                     /locus_tag="QEL58_002007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004146897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine protein phosphatase"
                     /protein_id="HDS1676485.1"
                     /translation="MVEPIVIEGQRAWLKQYGKGSRALALGLLNFVARRFHLDALRPP
                     PHRGGDAARETEARRLAELHAQGVNVPDVLGTGHAALVIGDNGSSFNTCLREADEAGR
                     DRLVMAAMQAIAEAHARGAYFGQPLPRNLTWDGQKVGFIDFEEDPLEVMDLAEAQARD
                     WLMFGYGVAKYYAERPEHLQAMMAEAMGDAQAPVREHVHAVSGRLHGLARVCMKLGRS
                     ARALAHSIFIAHGASTAGVLMLVGLCVDFLADGDLDVLQLLC"
     gene            complement(4616..5593)
                     /locus_tag="QEL58_002008"
     CDS             complement(4616..5593)
                     /locus_tag="QEL58_002008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014502254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketoacyl-ACP synthase III"
                     /protein_id="HDS1676486.1"
                     /translation="MSKRIYSRIAGTGSYLPEKVLTNADLEKMVETSDEWIQSRTGIR
                     ERHIAAEGETTSDLGYQAALRALEAAGIDASQLDMIVVGTTTPDLIFPSTACLIQAKL
                     GVAGCPAFDVNAACSGFVFALGVADKFIRSGDCKHVLVIGTETLTRMVDWNDRTTCVL
                     FGDGAGAVVLKADEETGILSTHLHADGSKKELLWNPVGVSTGFKDGANGGGTINMKGN
                     DVFKYAVKALDSVVDETLAANGLDKSDLDWLIPHQANLRIIEATAKRLDMSMDQVVVT
                     VDKHGNTSSGSVPLALDAAVRSGKVERGQLLLLEAFGGGFTWGSALLRY"
     gene            complement(5685..5879)
                     /gene="rpmF"
                     /locus_tag="QEL58_002009"
     CDS             complement(5685..5879)
                     /gene="rpmF"
                     /locus_tag="QEL58_002009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019302036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L32"
                     /protein_id="HDS1676487.1"
                     /translation="MAVQKSRVTPSRRGMRRAHDALSAKQLSTDPTTGEVHLRHHITA
                     DGFYRGKKVIQTKTSAVEED"
     gene            complement(5987..6496)
                     /locus_tag="QEL58_002010"
     CDS             complement(5987..6496)
                     /locus_tag="QEL58_002010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002814328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF177 domain-containing protein"
                     /protein_id="HDS1676488.1"
                     /translation="MSANVPETLDAWRMVVARRRFDGQVSLAELTRLQGLVADTDGEC
                     AYSLEFGRDDVLRVSYVELTIDTALPLTCQRSMQRFLLPVKMTQRLGLIRDEDEESSL
                     PEEYEALLVPEDGQLRPLDLVEDELVLAVPVVPLSPDGEAVDKDWAPSEEETKQANPF
                     AALAALKKQ"
     gene            6609..7178
                     /gene="maf"
                     /locus_tag="QEL58_002011"
     CDS             6609..7178
                     /gene="maf"
                     /locus_tag="QEL58_002011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014646184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum formation inhibitor Maf"
                     /protein_id="HDS1676489.1"
                     /translation="MPLVLASTSRYRRELLQRLGLPFDCARPEVDESPLNGEAPLALA
                     MRLAAAKSAEVAARHPGAWVIGSDQVADLNGQPLGKPGTVEAACAQLAAMSGQTVRFH
                     TAICLSRAGESFTAIDLTEVRFRALEQDEIARYVATEQPLDCAGSFKCEGLGISLFEA
                     IDNRDPTALVGLPLIALCGLLRKAGFAVP"
     gene            complement(7274..9109)
                     /locus_tag="QEL58_002012"
     CDS             complement(7274..9109)
                     /locus_tag="QEL58_002012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008267558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HDS1676490.1"
                     /translation="MQGEQRARAIFLWLWTLVTAAKLVVAARLPLFVDEAFYWQEGQH
                     LAAAYSDLPGLTAWLARLGVEIGGHHVLALRLPFLAIGALLPLLVVRTATRWFGNVAG
                     WQAGSLTLLMPLSATLGLLAVPDVPMALAAVICLHAGARLLHNVDASSAMKLALGLMI
                     GALSHYRFIGVIGVGFIALLALPQGRRMLADPRVWVALAVGVLAWLPLLAWNADNHDA
                     GLKFQVVERHPWTFEWNGLWFLVIQPMLVTPILCMAMWKVALAGTRSGGGTRVQWRYF
                     GLVGGVSTLGIFLLGFFTDVERISFHWPLPGYLALLVAVPVVLNSWPRWLRRTGWWLA
                     GAGMVLAFGYYLMASTPSLREQLAGSKYYPRNFAGWQPLAAAVREELQQMPAGSRVLA
                     GNFKVGAELGFQLGDGDIEVLPHPLNDKHGRTAQLAQWDLLHAGTRSAPMLLVLSPSD
                     QRYRDLLARYHAICEQVGPLPAPRVVSSDHGFQRFLLFRLPPQRASGACVTPAMAWLD
                     APANGEKVSGTLAIRGWAFKDGVGLAGVEVLVDGRSIGSARYGRVFDVRQTWPDSTDP
                     QHPAVGFDATLDTSTLAPGRHWMGLRLHGHDGSVEEWQEQPFEVR"
     gene            9152..10105
                     /locus_tag="QEL58_002013"
     CDS             9152..10105
                     /locus_tag="QEL58_002013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014036185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDS1676491.1"
                     /translation="MPASSPNPSMLTDQLRQALREAQDQVNALVLGKVPEVRLAFVAL
                     LSGGHLLIEDLPGLGKTTLAHALASSLGLTFQRVQFTSDLLPADVLGVSVYEAGSRQF
                     QFHAGPVFTHVLLADEINRAPPRTQSALLEAMAEQQVTLDGQTHPLPDPFFVIATQNP
                     VDLSGTFPLPDSQLDRFLLRLAMGYPNAQAERELLRGTDRRDLIARAVPKLDDTQVRA
                     LREAVGAIHASDALVDYVQALLTRSRQHAGVRVGLSPRAGLALLRAARAHALLLGRSH
                     VVPEDVQTLFVAVAGHRLVAEAESSSGPALARAILQTVAVD"
     gene            10108..11052
                     /locus_tag="QEL58_002014"
     CDS             10108..11052
                     /locus_tag="QEL58_002014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004146878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF58 domain-containing protein"
                     /protein_id="HDS1676492.1"
                     /translation="MTTRWARLRLLARPRRPESLPQRLDRHRIYVLPTRFGLFVATLL
                     VAMLLGALNYNNNPALLLALLLAAAAIASAIAAHLQLSGVQVDAISAEPVAAGQPLRL
                     RVDLSLRDPRARHGLHLQLGDSEAWTSLPPQGRGEVELEVPSERRGWLELPRIRLSTT
                     QPLGLVRAWSWVWPEQPLLVYPLAEALAPALPESGNDPLHTRAHASGEELHQLRPYRA
                     GDAPRSISWKHSARRDSLLVREYEKPIGIEVILDWRTLAPLGHEARIARLARWIDVAE
                     REGRRYTLLLPAHPAIGPGQGAGHHHLCLRALALLPHG"
     gene            11045..12994
                     /locus_tag="QEL58_002015"
     CDS             11045..12994
                     /locus_tag="QEL58_002015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010483838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3488 domain-containing transglutaminase
                     family protein"
                     /protein_id="HDS1676493.1"
                     /translation="MAEPPALIDRTARSWTLASAALALLPLLLQLPPLLAGVIAATAV
                     VTAFLSWRKVLPMPVRLLLVLGMLAAIVWQMGMVRPGRDTGCALLAAMLAIKSSELRS
                     LRDARSLLGFALFSPFAAFLLDQGPLTTVLAALAGISALLALQRLAQDEGHAGRVPLY
                     GQLRGVGRLLAIGLPLALACFWLFPRLATPLWGVPERAVGTPGLSDSMEPGQWLDLMA
                     DDTPALRVQFFGAVPEAAQRYWRGPVLTAFDGRRWMRDPASARRTPAVVEAGTQRWDY
                     QIDYEPTDRRQLVALDLPGQAPAGSTLDADMSLSSDRALASLSRWRLQSAPPRRFDST
                     LSPYLRRAALQLPDGFNPRTATLARQWRHDAGNDDAAIVRRALQWITTDFSYTLETPQ
                     AGRDPVDEFLFGYKAGFCEHFSSAFVVLMRNAGIPARVVTGFAGGTRNRLGDYWIVRR
                     MDAHAWAEVWLPQRGWVRVDPTAAVAPERILDTLDDRLQAGTDNPMQQRLLELGQMGD
                     WLRRGWNDLVLSFDARRQQQLLKPFGLADLGPGQLAAGFVIAALLALAWMAWLLARGE
                     RERDPLLRAWHRLGRRYARLGLAREPHETARDWAHRVHAQRPDPALLALSQRFADARY
                     AGTCTDLASLLRDLRRHRPTSGASP"
     gene            12991..13518
                     /locus_tag="QEL58_002016"
     CDS             12991..13518
                     /locus_tag="QEL58_002016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005408301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Slp family lipoprotein"
                     /protein_id="HDS1676494.1"
                     /translation="MNTKFFLTAVATLALSACATAPKPLQGQFSLVSPRDSVATQQVG
                     TPVRWGGRIIETKPGQGETCFQMISRPLNASGRPNTTSSDASDGRFIACRAGFYDPAV
                     FEAGRDVTFIGKIDGYQNTRIGDYDYRLPKLSADVIYLWPEQRQVDVVPYPYGPWGPG
                     PYGPYWGGYGRWGWW"
     gene            complement(13597..13956)
                     /locus_tag="QEL58_002017"
     CDS             complement(13597..13956)
                     /locus_tag="QEL58_002017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004146872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine triad nucleotide-binding protein"
                     /protein_id="HDS1676495.1"
                     /translation="MSTETLFSKIIRREIPATIVYEDDEVLGFKDIAPQAPVHVLFIP
                     KNEVIPTLDDLQPSQAHLIGKLALAAAEYARREGFAQDGYRVVMNCREHAGQTVFHIH
                     MHLLAGGPLGHFGSPGR"
     gene            complement(14024..14623)
                     /gene="recR"
                     /locus_tag="QEL58_002018"
     CDS             complement(14024..14623)
                     /gene="recR"
                     /locus_tag="QEL58_002018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005415496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination protein RecR"
                     /protein_id="HDS1676496.1"
                     /translation="MSALLLEQLIDALRVLPGVGQKTAQRMAYHLLEREREGGQRLAE
                     TLALAVERIGHCAQCRDFSETELCPTCANSSRERSQLCVVESPADRLAIENATGFRGV
                     YFVLQGRLSPLDGIGPRELGLEQLENRLAEGEVQELIIATSATVEGEATAHYLAQLAR
                     ARKVQPSRLAQGLPLGGELEYVDRGTLSHAFGTRSEFRD"
     gene            complement(14734..15054)
                     /locus_tag="QEL58_002019"
     CDS             complement(14734..15054)
                     /locus_tag="QEL58_002019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011346622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbaB/EbfC family nucleoid-associated protein"
                     /protein_id="HDS1676497.1"
                     /translation="MRGNIAQLMQQAQKMQENLQKAQEEIAKIEVTGSAGGGMVSVTL
                     TGAKECRKVRIDPSLASDPEMLEDLIAAAFNDASNKIDAESKSKMGSATAGMQLPPGM
                     KLPF"
     gene            complement(15061..17112)
                     /gene="dnaX"
                     /locus_tag="QEL58_002020"
     CDS             complement(15061..17112)
                     /gene="dnaX"
                     /locus_tag="QEL58_002020"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005408297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit gamma/tau"
                     /protein_id="HDS1676498.1"
                     /translation="MEDGGLMSYLVLARKWRPKRFAELVGQEHVVRALSNALDSGRVH
                     HAFLFTGTRGVGKTTIARIFAKSLNCEQGTSADPCGQCAACLDIDAGRYIDLLEIDAA
                     SNTGVDDVREVIENAQYMPSRGKFKVYLIDEVHMLSKAAFNALLKTLEEPPEHVKFLL
                     ATTDPQKLPVTVLSRCLQFNLKRLDEDQIQGQMTRILAAEDIEADDSAIVQLAKAADG
                     SLRDGLSLLDQAIAYAGGALREDVVRTMLGTVDRTQVAAMLDALAEGDGPRLLQVVAA
                     LAEFSPDWSGVLEALAEGLHRIQVQQLVPGAAVAEGLDATAFAERLRPEVVQLWYQMA
                     LNGRRDLPLAPSPRAGFEMAVLRMLAFRPAAAVPPVPKSVEGAAGGNVAGGGSGAGTH
                     DATPAAAAASAGPAATAQVAAPMQAAPREPDPEPEPAPQPEPEPTPEPEPVPVQEPVQ
                     PPPMKADVEAQMPPAEPAASDDLPPWATDEAEARDEALAVEMAGPDAAMVAPWQEPPT
                     PVAAPAEAEPAERERPFRTEGIAIAPAEPAMVRDAAPLDGVSELASAEDWLDLVANSG
                     LSGPSRQLAANAAFISCQHGTLKLGLSPGFEYLRSERALAALGEMLQKALGQAPKIVV
                     ETVETEHVPAETLHQRADRQRGERQQVAEAVFMDDPEVQVLIQQHGARVVSDSIRTFD
                     E"
BASE COUNT         2758 a         5938 c         5662 g         2969 t
ORIGIN      
        1 tcgactctac caaggcggtg ccgggcaatt gcccgccgcc acgcaccggt cagatgcgct
       61 tgaagatcag cgtgccgttg gtgccgccga agccgaagcc attggacatc accacgtcga
      121 ccttggcctg gcgtgcttcg ttcggcacgt agtccaggtc gcagccttcg cccggctgct
      181 gcaggttgat ggtcggcgga atgacattgt cctgcagcgc catcaccgag aagatcgctt
      241 ccacgccacc ggcggcgccg agcaggtggc cggtcatcga cttggtggag ctgaccatca
      301 tcttgtaggc gtggtcgccg aaggcggtct tcatcgccat ggtctcgccc aggtcgccca
      361 gcggcgtgga ggtgccgtgt gcgttgaggt agcccacctg ttccggggtc acgccggcgt
      421 ccttcatcgc catcaccatg caacgcgcgg cgccttcacc gttctcgctc ggcgcggtca
      481 tgtggtacgc gtcggagctg gcaccgaaac cggccagttc gcagtagatc ttcgcgccac
      541 gtgccttggc gtgctcgtac tcttccagga tcaggatgcc ggcaccgtcg cccagcacga
      601 agccgtcacg gtccttgtcc cacgggcgcg aggcctgttc cggggcgtcg ttgcgggtgc
      661 tcatggcctt catcgcacag aagccgccca cggcggtcgg cgaggagcca cgctcggcac
      721 cgcccaccac catcacgtcg gcatcgccgt actggatcat gcgcatcgcg gtaccgatcg
      781 aatggttcga ggtcgcgcac gccgacaccg ccgagaacga cgggcccttc aggccggtga
      841 tgatgctcag ctggcccggc agcatgttga tgatggtctt gggcacgtag aagggcgaga
      901 tcttcttgcc ctcgtggaac tcgatggtct gctcttcgat gccgagcagg ccgccgatgc
      961 cggcgccgac gatggcgccc atgcgatcgg cattggcctc ggtgatctcc aggcccgagt
     1021 catgcagggc catgaacgag gcgccgaggc cgtaatggat gaacgggtcc atcttcttgg
     1081 catccttgcc actgacccgg aacttgccga acagctcgtt gtcggcggtg atgtcaaatc
     1141 ccttgacctc acctgcaatc ttggtggtga accgatccag ataggcatca gcaacgttgg
     1201 tcagcggacc gatgcccgaa cgaccgtggg tgatgccttc ccagctgctg gccagatcat
     1261 tgcccaacgg cgagacgata cccaggccgg ttacgacgac gcgacgcttc attgctgttt
     1321 ctcctgaccc ggatggtttc tacgggtaac tcggtttgct tcgatgtgat gcccaaacac
     1381 acggggccgc aacagcggcc ccatggggtg cggtgcgcgg cgaggatcaa cccgcgcgcg
     1441 cactgccgtc tgacatcagg ccttgacgtg ggccttgacg tagtcgatgg cggcctgcac
     1501 ggtgctgatc ttctcggctt cttcgtccgg gatctcgcac tcgaattctt cttccagggc
     1561 catcaccagc tcgacggtgt ccagcgagtc agcgcccagg tcatcgacga acgatgcgct
     1621 gttggtgact tcttcttcct tgacgccaag ctgttcgacg acgattttct tgacgcgttc
     1681 ttcgatggtg ctcatgggat ctcgctccag atggagttgt ggttcaaaag tggtcgccat
     1741 caaaggcgat ggccgtggga tagtgtagtg gaaaccggcg cggccttgca tcgcagcaaa
     1801 aaacccggca gatcaaccac ttgcggcgca atccctgcgc cccttgctta cggcatgtac
     1861 atgccaccgt tcacatggag ggtttcaccg gtgatgtaac cggcagccgg gccggccagg
     1921 aaggccaccg catgggcgat gtcttccggc gaacccaggc gttcgagggc gatgtcgttg
     1981 atcagcgcgg tacgcgcttc ttccggcaac gccttggtca tgtcggtgtc gatgaagccg
     2041 ggagcgacca cattgacggt gacaccgcgc gaaccgattt ccttggccag cgacttgctg
     2101 aagccgatga tgccagcctt ggcggccgcg tagttggcct ggccggcatt gccggtgacg
     2161 cccaccaccg atgcgatgtt gatgatgcgg cccttgcgcg ccttcatcat gccgcgcatg
     2221 actgccttgc tggtgcggaa cacgctggtc aggttggtgt cgatgatcga cgcccagtcc
     2281 tcgtccttca tgcgcatcag caggttgtcg cgggtgatgc cggcgttgtt gaccaggatc
     2341 gagatcgggc cgaattcctt ggcgatgccg tccagcacgc tgtccagcgc agccgcgtcg
     2401 gtcacgttca gcgcgcggcc gtggccaccg tgggcggcca ggcgctcgcc gatcgccgca
     2461 gcgccggatt cggtggtggc ggtgccgatg acggtggcgc cctgggcggc cagcagatcg
     2521 gcaatggcgg caccaatgcc acggctggcg ccggtgacca gtgcgatttc accctgcagg
     2581 ggcttgctca tgatgttttc ctcagacggg ggcggccgcc gtacccgcgc cgcgtgcagc
     2641 ggccaccggt acgatcggca ggaacaggag gggtcaggcc gaccatgcct cacgggcagc
     2701 ttcgaagtcg cccggagtgg ccagtgaacg gccgtcgatg gccttgtcga tgcgcttgac
     2761 caggccggtc agcaccttgc ccgggccgca ttcggcgatc tgggtgatgc cacgcgcggc
     2821 cagcgcctgc acgcagccgg tccactgcac cggctggtac agctgctgca ccagcgcggt
     2881 gcggatggcg tcgacaccgt catgcacctt ggcatcgacg ttctgcacca ccggcagctg
     2941 cggtgcctgc caggacaggc cggccatcac ttcggccagg cggttggcgg cttcgcgcat
     3001 cagcggggtg tgcgagggca cgctgacggc cagcttgacc gccttgcgca cgcccttctc
     3061 ggccagcagc gccaacgcgc ggtcgacggc atcagcgtcg ccaccgatca cgatctggcc
     3121 cggcgaattg aagttggccg gcaccaccac ctggctgcct gcggcttcgg cgcagacatc
     3181 cagcaccagc tggtcctcgg cgcccagcac ggcggccatg gcgccgacac cggccggcgc
     3241 ggcttcctgc atcagctggc cgcgcaggcg caccaggtgc gcaccgtcat gcaggctcag
     3301 tgcgccggca gcgaccagcg cggtgtattc gcccaggcta tggccggcca gcaccgacgg
     3361 gcgcgggccg cccacggcgt tccaggcgcg ccacacgccg atgcttgcgg ccagcagcgc
     3421 cggctgggtg tattcggtac ggttgagcat ttcctccggg ccaccctggg acagcgccca
     3481 caggtcgacg ccggcaccat cggatgcctc ggtgaaggct tcacgcacct gcgggtgcag
     3541 ttcggccagc tcggccacca tgcccacaga ctgcgagccc tggccgggga agacaaaagc
     3601 aagggtggat acggtcacgc ggtcatccgc ttgttgcaat cgaagcgggc catgataagg
     3661 gcgaatccgc tgtgtcgtct gtacgtgcgc gtatgcaggc gtatggagcc gcccggccag
     3721 cgagccgccg agcatggccc ggcggacgca tcactcagca caacagctgc agcacgtcca
     3781 ggtcgccgtc ggcgaggaaa tccacgcaca ggcccaccag catcagcacg ccggcggtac
     3841 tggcaccatg ggcgatgaag atcgaatggg ccagcgcgcg cgcggaacgg cccagcttca
     3901 tgcatacccg ggccaggccg tgcaggcggc cactgaccgc atgcacgtgc tcgcgcaccg
     3961 gcgcctgggc atcgcccatc gcctcggcca tcatcgcctg caggtgctcg gggcgctcag
     4021 cgtagtactt ggccacgccg tagccgaaca tcagccagtc gcgggcctgc gcttcggcca
     4081 ggtccatcac ttccagcgga tcttcctcga agtcgatgaa acccaccttc tggccgtccc
     4141 aggtgaggtt gcgtggcagc ggctggccga aataggcacc gcgcgcatgc gcctcggcga
     4201 tggcctgcat cgccgccatc accagccggt cgcggccggc ctcatcggcc tcgcgcaggc
     4261 aggtattgaa cgaacttccg ttgtcgccga tcaccagcgc cgcatggccg gttcccagca
     4321 cgtcaggcac gttcacgccc tgcgcgtgca gttctgccag gcgacgggct tcggtttcgc
     4381 gtgcggcatc accgccgcgg tgcggtggcg ggcgcagggc atcgagatgg aaacgacggg
     4441 caacaaaatt gagcaggccc agggccagtg cgcggcttcc cttgccgtac tgcttcagcc
     4501 aggcgcgctg cccttcgatg acgatcggct caaccatggg caggtactcc tctaaacgcg
     4561 ttacggcccc agaggggccg taacgacaag cttcacgttg tcgtaacttg cactatcaat
     4621 agcgcagcag ggccgaaccc cacgtgaagc cgccgccgaa ggcttccagc agcaacagct
     4681 ggccgcgctc gaccttgccc gaacgcaccg ccgcatccag cgccaacggc accgagccgg
     4741 acgaggtgtt gccgtgcttg tcgacggtga ccacgacctg gtccatcgac atgtccaggc
     4801 gcttggccgt ggcttcgatg atgcgcaggt tggcctggtg cggaatcagc caatccaggt
     4861 cggacttgtc caggccgttg gcggccaggg tctcgtccac gaccgagtcc agcgccttga
     4921 cggcgtactt gaacacgtcg ttgcccttca tgttgatggt gccaccaccg ttggcgccgt
     4981 ccttgaagcc ggtcgagacg ccgaccgggt tccacagcag ctccttcttg ctgccatcgg
     5041 catgcaggtg ggtgctgagg atgccggttt cttcgtcggc cttcagcacg acagcgccgg
     5101 cgccatcgcc gaacagcacg caggtggtgc gatcgttcca gtcgaccatg cgggtcagcg
     5161 tttcggtgcc gatcaccagc acgtgcttgc agtcgccgga acggatgaat ttgtcggcca
     5221 cgcccaacgc gaacacaaag ccagaacagg ccgcattgac gtcaaaggca gggcaccctg
     5281 caacaccgag cttggcctgg atcaggcacg cggtggaggg gaagatgagg tcaggcgtgg
     5341 tcgtgccgac cacgatcatg tcgagctgcg aagcgtcgat accggccgct tcaagtgcgc
     5401 gcaacgcggc ttggtagccg aggtcgctgg tggtttcgcc ttcggccgcg atgtgccgtt
     5461 cacgaattcc ggtgcgcgac tggatccact catccgaggt ttcgaccatt ttttccaggt
     5521 cggcgttggt caggactttt tccggcaaat agctaccggt gcccgcgatc ctcgaataga
     5581 tccgcttgct catcatgttt cctgttgcgc gggccgccga tcaccggcac acccgggaaa
     5641 gaaggcaaag gccgctgccc gcaggcagcg gccttcccgg cacatcaatc ttcttcgacg
     5701 gccgaggtct tggtctggat gaccttcttg ccgcggtaga aaccgtcagc agtgatgtgg
     5761 tgacgcaggt gcacttcgcc ggtggtcggg tcggtcgaca gctgcttggc gctcagggcg
     5821 tcatgggcac gacgcatgcc gcggcgggac ggggtgacac gggatttctg gacagccatg
     5881 ggattgctcc aaactcggtt cgttttgctt cgtcgtatcg tcgcgcagga cgccagcgcc
     5941 cagcacactt tcgctttcgc cgcagccgcc gacgacaatc cggctgctat tgtttcttca
     6001 gtgctgccaa cgccgcaaac gggttggcct gctttgtttc ttcttcgctc ggcgcccagt
     6061 ccttgtcgac tgcttcgcca tcgggcgaca gcggtacaac cggcactgcc agcaccaact
     6121 cgtcctcgac caggtccagc ggacgcagct ggccgtcttc cggcaccagc agcgcctcgt
     6181 actcctccgg cagggacgat tcctcgtcct cgtcgcggat caggccaagc ctctgggtca
     6241 tcttcaccgg caacaggaaa cgctgcatgc tgcgctgaca ggtcagcggc aacgcggtat
     6301 cgatggtcag ttccacatag gatacccgca agacgtcgtc gcgaccgaac tcaagcgagt
     6361 aggcacactc gccgtcggta tctgcaacca acccctgcag gcgggtcaat tcagccaggg
     6421 acacctgacc gtcgaagcgc cttcgcgcta caaccatccg ccaggcatcc agcgtttcgg
     6481 gcacgttcgc ggacataagc cgctgaatac taaggatcgg gagggccggt gtcaaatgcc
     6541 tgccatacgg gccttgccgc tggcagcgcg ggcggccaga ctgccccgcc ctgccccggt
     6601 attgtcgcat gccactggtc ctggcctcca cgtcccgcta ccgccgcgag ctgttgcaac
     6661 ggctgggcct gccgttcgac tgcgcgcgcc cagaggtgga tgaaagcccg ttgaacggcg
     6721 aagcgccgct ggccctggcc atgcgcctgg ccgccgccaa atccgccgag gtcgcggccc
     6781 gccatccggg cgcctgggtg atcggttcgg accaggtggc cgacctgaac gggcaaccac
     6841 tgggcaagcc gggcacggtc gaggcggcct gcgcgcagct ggcggcgatg tccgggcaga
     6901 cggtgcgctt ccataccgcg atctgtctca gccgcgccgg agaatctttc acggccatcg
     6961 acctgaccga agtgcgcttc cgcgcgctgg aacaggatga gatcgcccgt tacgtggcta
     7021 ccgaacagcc gctggactgc gccggcagct tcaaatgtga aggtctgggt atcagcctgt
     7081 tcgaggcgat cgacaaccgc gacccgaccg cgctggtcgg cctgccgttg atcgcactgt
     7141 gcgggttgct gcgcaaagca ggtttcgcag tgccgtgacc tgtagagtcg agccatgctc
     7201 gactgcttct gctgtagatg gcaggaggcc aggtaagagc agtcgagcat ggctcgactc
     7261 tacaaaagca ggttcaacga acctcgaacg gctgctcctg ccattcctcc acgctgccat
     7321 cgtggccgtg caggcgcagg cccatccagt gccggcccgg tgccagcgtg ctcgtgtcca
     7381 gggtggcatc aaagcccacg gccggatgct gcggatcggt actgtccggc caggtctggc
     7441 gaacatcgaa gacacggcca tagcgagcgc ttccgatcga gcgtccatcg accagcacct
     7501 cgacacctgc caggccgacg ccatccttga aggcccaccc gcggatggcg agggtgccgg
     7561 acactttctc gccattggca ggcgcatcca gccacgccat cgccggggtc acgcatgcgc
     7621 ccgaggcacg ctgcggcggc aaccggaaca gcaggaagcg ctggaatcca tgatcgctgc
     7681 tgaccacgcg cggtgcaggc aagggcccca cctgttcgca gatggcgtga tagcgcgcca
     7741 gcaggtcgcg gtagcgctga tcgctgggcg acagcaccag cagcatcggc gccgagcgtg
     7801 tacccgcgtg cagcaggtcc cactgtgcaa gctgcgcggt ccgcccatgc ttgtcgttga
     7861 gcgggtgcgg cagcacttca atgtcaccgt cgcccagctg gaagcccagt tcggccccta
     7921 ccttgaagtt gccggccagc acgcgcgaac ccgccggcat ctgctgcagt tcttcgcgca
     7981 cggcggcggc cagcggctgc cagcctgcga aattgcgcgg gtagtacttg ctgcctgcca
     8041 gctgctcacg cagcgatggc gtggaggcca tcaggtaata gccaaaggcc agcaccatgc
     8101 ccgcgcccgc cagccaccag ccggtgcggc gcagccagcg tggccagctg ttgagcacca
     8161 ccggcaccgc caccagcagc gccaggtaac ccggcagcgg ccagtggaaa ctgatgcgct
     8221 cgacgtcggt gaagaagccg agcaggaaaa tgcccagcgt ggatacaccg cccaccaggc
     8281 cgaagtagcg ccattgcacg cgcgtaccgc cgccgctgcg ggtaccggcc agcgccacct
     8341 tccacatcgc catgcacagg atcggcgtga ccagcatcgg ctggatcacc aggaaccaca
     8401 gcccgttcca ctcgaaggtc cagggatgcc gctcgaccac ctggaacttc aggccggcat
     8461 cgtgattgtc ggcattccat gccagcaacg gcagccaggc cagtacaccc accgccaacg
     8521 caacccatac gcgcggatcg gccagcatgc gccggccctg tggcagcgcc agcaatgcaa
     8581 tgaagccaac accgatgacg ccgatgaaac ggtagtggct gagggcgccg atcatcaggc
     8641 ccagcgccag cttcatcgcc gatgatgcat ccacgttgtg cagcaggcgc gcaccggcat
     8701 gcaggcagat caccgccgcc agcgccatcg gcacatccgg caccgccagc aggcccagcg
     8761 tcgccgacag cggcatcaac agcgtgaggc tgcccgcctg ccaacccgcc acattgccga
     8821 accagcgcgt ggccgtgcgc accacgagca atggcagcag cgcaccgatg gccaggaacg
     8881 gcagtcgcaa tgccagcacg tgatggccgc cgatctccac gcccagccgt gccagccatg
     8941 cggtcagccc gggcagatcg gaataggccg cagccagatg ctgcccttcc tgccaataga
     9001 acgcctcgtc gacgaacaat ggcaggcgcg cagccaccac cagcttggcc gctgtgacca
     9061 gcgtccacaa ccagagaaaa attgcccgtg cgcgctgttc gccttgcatt gctctatgga
     9121 taatcaagtg aaattcagaa ctgagacgat catgccagct tcgtccccca atcccagcat
     9181 gctaaccgat caattgcgtc aggccctgcg ggaggcacag gatcaggtca acgcactggt
     9241 gctgggcaag gtgccggaag tcaggctggc gtttgtcgcc ctgctttccg gcgggcatct
     9301 gctgatcgaa gatctgcccg ggctcggcaa gaccacattg gcgcatgcac tggccagcag
     9361 cctcggcctc accttccagc gcgtgcagtt cacctccgac ctgttgccgg ccgatgtact
     9421 gggcgtgtcg gtgtacgagg ccggcagccg ccagttccag ttccatgccg gccccgtgtt
     9481 cacccacgtg ctgctggccg acgagatcaa ccgcgcgccc ccgcgcacgc agagtgcgct
     9541 gctggaggcc atggccgaac agcaggtcac cctggacgga cagacccatc ccctgcccga
     9601 tcccttcttc gtgatcgcca cgcagaaccc ggtggacctg tccggcacgt tcccgctgcc
     9661 ggattcgcag ctggatcgat tcctgctgcg cctggcgatg ggctacccca acgcccaggc
     9721 ggagcgcgag ctgctgcgtg gaaccgatcg tcgtgacctg atcgcgcgcg cggtaccgaa
     9781 gctggatgac acgcaggtcc gcgcgctgcg tgaggcggtc ggtgcgattc atgccagtga
     9841 tgcgctggtc gactatgtgc aggccttgct gacccgcagc cgccagcacg cgggcgtacg
     9901 ggtgggcctg tcaccgcgcg ccggcctggc gctgctgcgc gcggccaggg cgcatgcgct
     9961 gctgctgggc cgcagccatg tggtccccga ggatgtgcag acgctgttcg tggccgtggc
    10021 cgggcatcgg ctggtggccg aggccgagtc cagctcagga ccggcgctgg cgcgggcgat
    10081 cctgcagacc gtcgcggtgg actgagggtg accacgcgct gggctcgact acggctgctg
    10141 gcacgtccgc gccggcccga atcgctgccg cagcggctcg accgccatcg catctatgtg
    10201 ctgcccacgc gtttcgggct gttcgtcgcc accctgctgg tcgcgatgct gctgggggcg
    10261 ttgaactaca acaacaaccc ggcactgctg ctggcactgc tgctggccgc agcggcgatt
    10321 gccagtgcca tcgccgcgca cctgcagctt tccggtgtac aggtcgatgc gatctcggca
    10381 gaaccggttg cggccgggca accgctgcgc ctgcgcgtgg acctgtcgct gcgtgatccg
    10441 cgtgcgcggc atgggctgca cctgcaactg ggtgacagcg aagcctggac ctcactgccg
    10501 ccacaggggc gtggcgaggt cgaactggaa gtccccagtg agcgccgcgg atggctggag
    10561 ctgccgcgca tccgcctgtc caccacccag ccgctggggc tggtgcgcgc ctggtcgtgg
    10621 gtgtggccgg aacagccgct gctggtctat ccgttggccg aggcgctagc cccggccttg
    10681 ccggagagcg gcaacgatcc actgcacacg cgtgcccatg ccagtggcga agaactgcac
    10741 cagctgcgtc cctatcgtgc aggcgatgcg ccgcgcagca tttcatggaa gcactccgcg
    10801 cgccgcgaca gcctgctggt acgcgagtat gaaaagccga tcggcatcga agtgatcctc
    10861 gactggcgca cgctggcgcc gctggggcac gaagcccgca tcgcgcgatt ggcgcgctgg
    10921 attgatgtgg ccgagcgcga gggccggcgc tacaccctgc tgctgccggc acatccggcg
    10981 atcggccctg gccagggggc cggccatcac cacctgtgcc tgcgtgcact ggcgttgttg
    11041 ccgcatggct gagccccctg ccctgatcga tcgcactgcc cgcagctgga ccctggccag
    11101 cgcggcgctg gcgctgttgc cgttgctgct gcagctgccg ccactgttgg ccggcgtcat
    11161 cgcagccaca gcggtggtga ctgcattcct gtcatggcgg aaggtgctgc cgatgccggt
    11221 acgcctgctg ctggtgctcg gcatgctcgc cgccatcgtc tggcagatgg gcatggtgcg
    11281 ccccgggcgc gataccggtt gtgccctgct ggccgcgatg ctggcgatca agtccagcga
    11341 actgcgcagc cttcgcgatg cccgcagcct gctcggcttc gcgctgttct cgccgtttgc
    11401 ggcgttcctg ctcgaccagg gaccgctgac aaccgtgctg gcggcgttgg caggcatcag
    11461 cgcgctgctg gccctgcaac gcctggccca ggatgaaggc catgcaggcc gagtgccgtt
    11521 gtacgggcag ttgcgcggcg tgggtcgcct gctggcgatc gggctgccgc tggccctggc
    11581 ctgcttctgg ctgttcccgc gcctggcgac gccactgtgg ggggtacccg agcgcgccgt
    11641 cggcaccccg gggctgtccg acagcatgga accgggccag tggctggacc tgatggccga
    11701 cgacacgcct gcactgcgcg tgcagttctt cggtgccgta cccgaagcgg cgcagcgcta
    11761 ctggcgtggg ccggtgctga ccgcattcga tggacgacgc tggatgcgcg accccgccag
    11821 cgcgcggcgg acgcccgcgg tggtcgaggc cggcacgcaa cgctgggact accagatcga
    11881 ttacgagccg accgaccgtc gccagctggt cgcgctggat ctgccgggcc aggcgcccgc
    11941 aggcagcacg ctggatgcgg acatgagcct gagcagcgac cgagcgctgg cctcgctcag
    12001 ccgctggcgg ctgcaatcgg cgccaccacg gcgcttcgac agcaccttgt cgccgtatct
    12061 gcggcgcgcg gcgctgcagt tgcccgatgg cttcaatcca cgcaccgcca ccctggcacg
    12121 ccaatggcgg catgacgcag gcaacgatga cgcggccatc gtccgccgcg cactgcaatg
    12181 gatcaccacc gatttctcct acacgctgga aacgccccag gccgggcgcg acccggtcga
    12241 cgagttcctg ttcggctaca aggccggctt ctgcgagcac ttcagttccg ccttcgtggt
    12301 gctgatgcgc aatgccggca ttccggcacg ggtggtcacc ggattcgccg gcggcacccg
    12361 caatcgcctt ggcgattact ggatcgtgcg acggatggat gcccatgcgt gggccgaggt
    12421 gtggctgccg cagcgcggct gggtacgggt cgatcccacc gctgcggtgg cacccgaacg
    12481 catcctcgat accctcgacg accgcctgca ggctggcacc gacaacccga tgcagcagcg
    12541 tttgctggaa ctggggcaga tgggcgactg gctgcgccgc ggctggaacg atctggtgct
    12601 gtccttcgac gcacgccgcc agcagcagct gctcaagccg ttcgggctgg ctgatctggg
    12661 ccccggtcag ctggccgccg gcttcgtgat cgccgcgttg ctggccttgg cctggatggc
    12721 ctggctgctg gcccgcggcg aacgcgaacg tgatccgctg ctgcgcgcct ggcaccggct
    12781 ggggcgacgc tatgcacgcc tcggcctggc ccgggagccg catgaaaccg cacgggactg
    12841 ggcgcatcgg gtacacgccc agcggcccga ccctgccctc ctcgcactca gccagcgttt
    12901 cgccgacgcg cgttacgctg gaacttgcac cgacctcgct tcattattgc gggacctgcg
    12961 caggcatcgc ccgacttccg gagcctcccc atgaacacca agttcttcct caccgccgtg
    13021 gccacgctgg ccctgtcggc ctgcgccacg gctcccaagc cgctgcaggg acagttcagc
    13081 ctggtctccc cccgcgactc ggtcgccacc cagcaggtcg gcacgcccgt ccgttggggc
    13141 ggtcgcatca tcgaaaccaa gcctggccag ggcgagacct gcttccagat gatctcgcgc
    13201 ccgctcaatg ccagtggccg cccgaacacc acctcgtccg acgccagcga cggccgcttc
    13261 atcgcctgcc gcgccggttt ctacgacccg gccgtgtttg aagccggccg cgacgtgacc
    13321 ttcatcggca agatcgatgg ctaccagaac acccgcatcg gcgactacga ctatcgcctg
    13381 ccgaagctgt cggccgacgt gatctacctg tggccggaac agcgccaggt cgatgtggtg
    13441 ccctacccct atggtccgtg gggcccgggt ccgtatggcc cgtactgggg cggctacggc
    13501 cgttggggct ggtggtgatc gccagccggc atgcatgacg gaaaaggccg ccctcgggcg
    13561 gccttttttc atccacgcag ggcgtggacg ggggattcag cgccccggcg aaccgaaatg
    13621 gcccagcggt ccaccggcaa gcagatgcat gtggatgtgg aacacggtct gcccggcatg
    13681 ctcgcggcag ttcatcacga cgcggtagcc gtcctgtgca aaaccctcgc ggcgcgcgta
    13741 ctcggccgcg gccagtgcca gcttgccgat caggtgcgcc tgcgacggct gcaggtcgtc
    13801 cagggtcggg atgacctcgt tcttcggaat gaacagcaca tgcaccggcg cctgcggcgc
    13861 gatgtccttg aagcccagca cctcgtcatc ctcgtagacg atggtggccg ggatctcgcg
    13921 acggatgatc ttgctgaaga gggtttcggt gctcatggtc ggcctcggcg gggatgtcgt
    13981 ccgcattgta ggccggccgc gccgggccat gcccagcgcc tgctcaatcg cggaattcgc
    14041 tgcgcgttcc gaacgcgtgc gacagcgtgc cgcggtcaac gtattcaagc tcgccgccga
    14101 gcggcaggcc ctgtgccagg cggctgggct gcaccttgcg cgcgcgtgcc agctgcgcca
    14161 ggtagtgcgc ggtggcctct ccctcgacgg tcgcgctggt ggcgatgatc aactcctgca
    14221 cctcgccttc ggccaggcgg ttctccagct gctccagccc cagttcgcgc gggccgatgc
    14281 catcgagcgg cgacaaccgg ccctgcagca cgaagtagac gccacggaac cccgttgcgt
    14341 tctcgatggc caggcggtcc gccggcgatt cgaccacgca cagctggctg cgttcgcggc
    14401 tgctgttggc acaggtcggg cacagctcgg tttcgctgaa gtcgcggcac tgcgcgcagt
    14461 ggccgatgcg ctccaccgcc agcgccaggg tctcggccag gcgctggcca ccttcgcgct
    14521 ctcgctcgag cagatggtag gccatgcgct gcgcggtctt ctggcccacg ccaggcagca
    14581 cccgcagtgc gtcgatcaat tgttcaagca ggagtgcgga cacggcggca tgctttgtag
    14641 agtcgagcca tgctcgactg gaggttgaag cagtcgagca agctcgactc tacgcggtcg
    14701 atggcacccg ataaccgggt gccatatcac gcatcagaac ggcagcttca tgcccggcgg
    14761 cagctgcatg ccggcggtgg ccgaacccat cttcgacttc gactcggcat cgatcttgtt
    14821 cgaggcgtcg ttgaaggcgg ccgcgatcag gtcttccagc atttccgggt cgctggccag
    14881 cgacgggtcg atgcgcacct tgcggcactc cttggcgccg gtcagggtca cgctgaccat
    14941 gccgccaccg gcgctgccgg tcacttcgat cttggcgatt tcttcctggg ccttctgcag
    15001 gttctcctgc atcttctggg cctgctgcat cagttgggcg atgtttccgc gcatggtgtc
    15061 ttactcgtca aaagtacgga tggaatcgga aacaacccgc gcgccgtgct gttggatcag
    15121 cacctgcact tccgggtcgt ccatgaaaac ggcctctgcc acctgctgcc gctcgccacg
    15181 ctggcggtcg gcccgctggt gcagggtctc ggccggaacg tgttcggttt ccacggtctc
    15241 gaccacgatc ttcggcgcct ggccaagagc cttctgcagc atctcgccca gggcagccag
    15301 cgcgcgctcg gagcgcaggt attcaaatcc gggcgaaagg cccagtttca aggtcccgtg
    15361 ctggcagctg atgaaggcgg cgttggcggc cagctgtcgc gaagggccgc tgaggccgct
    15421 gttggcgacc agatccagcc agtcctcggc gctggccagt tcgctgacac cgtccagcgg
    15481 cgcggcgtcg cgcaccatcg ccggctcggc cggggcgatg gcgatgcctt cggtgcggaa
    15541 tggacgctcc cgctcggcag gttccgcttc agccggcgct gccaccgggg ttggcggttc
    15601 ctgccagggc gccaccatgg ccgcgtccgg gccggccatc tcgaccgcca gcgcctcgtc
    15661 gcgggcctcg gcctcatcgg tggcccacgg cggcaggtcg tcgctcgccg ctggctcagc
    15721 cggcggcatc tgcgcttcca cgtcggcctt catcggcggc ggctgcacgg gctcttgcac
    15781 cggcaccggc tcgggttccg gcgttggctc cggctccggt tgcggggccg gctcaggttc
    15841 gggatcgggt tcgcgcggtg cggcctgcat tggggcagcc acctgtgccg tcgcggccgg
    15901 gcctgccgaa gcggcggcag cggccggcgt cgcatcgtgg gtcccggcgc cgctgccacc
    15961 accggcaacg ttgcctcctg cggcaccttc caccgacttc ggtaccggcg gtaccgcggc
    16021 ggccggacgg aacgccagca tgcgcagcac cgccatctcg aagccggcac gcgggctcgg
    16081 cgccagcggc aggtcacgac gaccgttcaa ggccatctgg taccagagct gcaccacttc
    16141 agggcgcagg cgctcggcaa aggcggtggc atccaggcct tcggcaacgg ccgcacccgg
    16201 caccagctgc tgcacctgga tacggtgcag gccttcggcc agcgcttcca gcacgccact
    16261 ccagtccggc gagaactcgg ccagcgcggc caccacctgc aacaggcgcg ggccatcgcc
    16321 ctcggccagc gcatccagca tcgccgccac ctgcgtgcgg tcgaccgtgc ccagcatggt
    16381 gcgcaccacg tcctcgcgca gcgcgccgcc ggcataggcg atcgcctggt ccagcagcga
    16441 caggccgtca cgcaggctgc cgtcagcggc cttggccagc tgcacgatcg cgctgtcgtc
    16501 ggcctcgatg tcttccgccg ccaggatgcg ggtcatctgg ccctggatct gatcctcgtc
    16561 caggcgcttg agattgaact gcaggcagcg gctgagcacg gtcaccggca gcttctgcgg
    16621 gtcggtggtg gccagcagga acttgacgtg ttccggcggc tcttccagcg tcttcagtag
    16681 cgcgttgaac gccgccttgg acagcatgtg cacttcgtcg atcaggtaga ccttgaactt
    16741 gccgcgcgac ggcatgtact gcgcgttctc gatcacctcg cgcacgtcgt ccacgccggt
    16801 gttggacgcg gcgtcgatct ccagcaggtc gatgtaacgg ccggcgtcga tgtccaggca
    16861 ggccgcgcac tggccacacg ggtcggcgct ggtgccctgc tcgcagttca gcgacttggc
    16921 gaagatgcgc gcgatggtgg tcttgcccac gccacgcgta ccggtgaaca ggaacgcatg
    16981 gtggacccgg ccactgtcca gcgcattgct gagcgcacgg accacgtgtt cctggcccac
    17041 cagctcggca aaacgcttcg gacgccactt gcgggcaagg acgagatagg acatcaggcc
    17101 accgtcttcc atcggatgtt ccattgtgcc atgcctgtcc agccccctcg cccccggcac
    17161 gcccctcgca ggttcctgac cagggtgctt gtgaagtgcc gcacggcccg ctagaatctg
    17221 cgcccctgct gaggcgtttg ccgatggcag ggatccggag aggtgtccga gtggttgaag
    17281 gagcacgcct ggaaagtgtg taagcgtcta aaccgcgctt cgggggt
//
LOCUS       DAOKIP010000072        17261 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.072,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000072 DAOKIP010000000
VERSION     DAOKIP010000072.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 17261)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17261)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17261
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.072"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(14..4921)
                     /locus_tag="QEL58_002021"
     CDS             complement(14..4921)
                     /locus_tag="QEL58_002021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-2-macroglobulin family protein"
                     /protein_id="HDS1676499.1"
                     /translation="MSGPARRKRWGWAAAVLAGGLLLGLAGCRNDSGQLPKTSGEAIT
                     TKAEQVKEFTLLRAYPDQKNDGLSLALEFSRPLVGTQDFDKLVRFEEKVGTDDSSWTL
                     SDDGLTLRYPFVEAGKEFSLVVSPDLLAADGSRLGKELKQKVFSGELKPVVGFASQGS
                     VLPAKDSRGLPVVSVNVPEVDVEFLRVREKDLPTFFSQYQRGGRRGSWELSSDYERSP
                     INKLAEPVYVNRFILGGKQNERVLTYLPTQDIKELQEPGLYFALLKRTGDYEGEFDTA
                     FFSVSDIGLHTRAYKDKLFVHTAGLKDGAPLKGIDLRVLDAKGEVVLKGSTDGNGNAL
                     LNYTLDATHVLVASSGKDTSFLPFNQPALDLSEFAVAGRDNAWFDVYAWSGRDLYRPG
                     ETVRLSALLRDNDGKPVKAQPVFLRLKQPDGKTFRETRLQPGDQGYINFEQVIPAEAP
                     TGRWQVEFRTDPASKEAIQGMTLRIEEFLPERMKLDLDSAQKTLKPGEELRLQANGAY
                     LYGAPADGNRFTARMAVAAEQKPVDGLPGYFFGDPTLQLPREAKDVVDTTLPANGQLR
                     EDVALPEEAAKAKAPIAVVLSGSLYETGGRTVTRTLKRVMWPANALVGVRPLFNPDDG
                     ADSNGNARFELMRVDAAGNPQPAKGLKITLVRELRDYHWTFNDNRWDYDFTRRFENKE
                     TRTVDAGSSAVAFDFPVEWGEYRVDVFDPSTGLTSRYPFRAGWSWGDDNRGLDARPDK
                     VKLGLDKTGYKAGDTLEVTVTPPHAGKGILMVETDRMLYVQDIEAKPGSTFKIPVTAD
                     WERHDVYITALVFRGGSAPSKITPARAVGVVHVPMDRKGRTVAVGLVAPKQMRPEQDL
                     PVTVSAPQLAGKTAHVTVSAVDVGILNITRFPVPDAGAHFFAQRRLGIDAYDIYSRVI
                     ESFDGGAGKLKFGGDMALQALPQAKRPTARVQTVDLFSGPVQLDAKGIARIRLKVPDF
                     NGTLRVSALVYSDDQYGKRDVETVVRAPILAEASMPRVLAPGDRSTVTLDVQNFTGKP
                     GQFNVKVDSEGPLNLGEGSRSVQLNADAKTTLSFPLSAREGHSVAKVRVRVDGNGFKA
                     DRRYELPVRAAWPQVLRSQVRTLDPLAAVSLDNSLTDGLMSESVNARLLVSPLPPIPF
                     ASALQGALNYPYGCAEQTTSKGYAALILDQATSSMLGADGLDAKTRRERMEGAFGRLA
                     SMQVANGNFSMWGDDGYVNPWLTPYITEFLLDAKDAGFAVPDNVLQKALNRLSEDLLS
                     GGNQFYGQDDREKLKFANQAYSGYVLARVNRAPLGTLRTLYDNERSKAVGGLSLVHLG
                     VALSLQGDAKRGQAALAAAFAKSSSERPSYFGDYGSAIRDDALMIALTHENKLAKPAW
                     DARAVDLGRGLDARRNAGWMWLSTQEQVAIARLGKALAANQKALVAGELVIGGTTEAI
                     SERKLFGRNFSASELASGVRFTPQGQPPMFASIDVAGIPRSAPAPDNSVLGIERSYYG
                     TDGKPWSPRPLKEGEALIVRVTVTADTTMPDALLTDLLPAGLEIENFNLGDAKQWADV
                     VVDGITISDRGEAADTKHEEFRDDRYVAALKLSRGSKASVFYLVRAVTPGTYSVPPPL
                     VEDMYRPQLRGVGRSNPTTITVVQP"
     gene            5319..6383
                     /locus_tag="QEL58_002022"
     CDS             5319..6383
                     /locus_tag="QEL58_002022"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="WD40 repeat domain-containing protein"
                     /protein_id="HDS1676500.1"
                     /translation="MEVTSGNAAKPKLELKNFPGPGEAAGWAVKQEWSRLKKGFVLLN
                     PVAEAGQPSMHRYIGGGYTGALMIAGRHGRMVTNRYQDEDASGAATDMLLLVGDDAGI
                     LHDWRPGKTDLAWSALPADDGKGFLIRFDSGIYLWPSDGRPPQRISDATVMSSPFLTT
                     SNGYVAWHDGDHVTVMRLADEQRFLKLARTPAMVGGHSRQMMGALSPDATTLACCATP
                     GEIEYIDIAQADTVRRHRSDFEMITKMEWSADGRWLLALEQYGEWRLLCLDAATGECR
                     PGWPKFADMTRTDFALDSDSKRLAILHRGHIALHDFTDMREIRRFPVDHVVRTAHIAW
                     TGDNAISVRTDYGCLSTYAI"
     gene            complement(6462..7922)
                     /locus_tag="QEL58_002023"
     CDS             complement(6462..7922)
                     /locus_tag="QEL58_002023"
                     /EC_number="4.2.1.3"
                     /EC_number="4.2.1.79"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019338674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 2-methylcitrate
                     dehydratase/aconitate hydratase"
                     /protein_id="HDS1676501.1"
                     /translation="MSDNATPSNERAAWDALLVDIVDYVRDARIDSPLAFQTAHHCLL
                     DTLGCGLEALSFPACSKLLGPLVPGISVVNGARVPGTHYVLDPVQAAFNLGAMVRWLD
                     FNDTWLAAEWGHPSDNLGGILAVCDWLGRNARALRRPPPTLHDVLLAMIKAHEIQGVL
                     ALRNSFNRVGLDHVVLVKVATTAVVAHLLGLDRERMLNALSLAWVDGQALRTYRHAPN
                     TGSRKSWAAGDATSRGVRLALMAASGEMGYPSVLSAPTWGFEAVSMHGQQLTLGRPLG
                     SYVMENVLFKISYPAEFHGQTAVEAAITLHQQLRAMGRRVEDIAHIAIRTQEACIRII
                     DKQGPLHNPADRDHCVQYMVAIALLHGRLVAEDYEDDVAADPRIDALRAKMACHEDPR
                     LSADYLDPDKRSIANGLSVRFTDGSELPEVLVEYPLGHARRREEGIPLLMDKFRRHLA
                     HRFPTVQQQRILAASLDPVALAAMPVTDYVDLYLPG"
     gene            complement(8075..9253)
                     /gene="prpF"
                     /locus_tag="QEL58_002024"
     CDS             complement(8075..9253)
                     /gene="prpF"
                     /locus_tag="QEL58_002024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019338675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-methylaconitate cis-trans isomerase PrpF"
                     /protein_id="HDS1676502.1"
                     /translation="MSFLPQLRIPATYMRGGTSKGVFFRLQDLPETAQVPGAARDALL
                     MRVIGSPDPYGKQTDGMGGATSSTSKCVIISAASVPDHDVDYLYGQVSIDTAFVDWSG
                     NCGNLSTAVGPFAIANGLIDPARVPRDGLCTVRIWQANIGKTIIAHVPMRDGQVQETG
                     DFELDGVTFPAAEIQLEFIDPSDDGDAGAMFPTGNLVDTLDVPGVGSFEVTMITAGIP
                     TIFLNAADLGYTGTELQPAINEDKAALQKFEAIRAHGALRMGLISKLEDAATRQHTPK
                     VAFVAPAQDYVSSSGKAIAASAIDLHARALSMGKLHHAMMGTAAVAIGTAAAIPGTLV
                     NRAAGGGEREAVTFGHPSGTLRVGAQAGRVDGQWTVTKAIMSRSARVLMEGKVRVPAE
                     "
     gene            complement(9283..9987)
                     /locus_tag="QEL58_002025"
     CDS             complement(9283..9987)
                     /locus_tag="QEL58_002025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019186078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676503.1"
                     /translation="MGTAFYNIAGTVNTAFILLSLLGVGAQLRLVRRRRERAGAADSA
                     TAVLSLNQFTVSFLAYLSFFVYGYSITPFNHFIVWPRLLASVLVMAILVEIWRDRRSR
                     SATTSVLTAALLLLCALAGLAWGDRHVDEGRVVASAMIVVITALLAQGYTHQILLILR
                     NGHTGAVSLRMSQLILLMDLSTIVFAFAMGMQMGWPLLLLAVVSGSTKLVILYLFRWQ
                     QGASAADRRRQRLQPA"
     gene            complement(10082..12700)
                     /gene="acnD"
                     /locus_tag="QEL58_002026"
     CDS             complement(10082..12700)
                     /gene="acnD"
                     /locus_tag="QEL58_002026"
                     /EC_number="4.2.1.99"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe/S-dependent 2-methylisocitrate dehydratase
                     AcnD"
                     /protein_id="HDS1676504.1"
                     /translation="MNTDYRKTLPGSALDYFDARAAVDAIQPGAYATLPYTSRVLAEN
                     LVRRCDPATLSDSLKQLIERRRDLDFPWFPARVVCHDILGQTALVDLAGLRDAIADKG
                     GDPAKVNPVVPVQLIVDHSLAVECGGYDPQAFEKNRAIEDRRNEDRFHFIDWTKLAFQ
                     NVDVIPPGNGIMHQINLEKMSPVVYVQDGVAFPDTCVGTDSHTPHVDALGVIAIGVGG
                     LEAENVMLGRASWMRLPDTVGVELSGRPQPGITATDVVLALTEFLRKERVVGAWLEFF
                     GEGAAALTIGDRATISNMCPEYGATAAMFYIDAQTIDYLRLTGREESQVALVENYART
                     TGLWADDLATAQYERVLRFDLSSVVRNMAGPSNPHKRVATAELAERGIADEAKLEAGK
                     AEQAQGLMPDGAVIIAAITSCTNTSNPRNVIAAALLARNANARGLQRKPWVKSSLAPG
                     SKAVQLYLEESGLLPDLEQLGFGIVAFACTTCNGMSGALDPKIQQEIIDRDLYATAVL
                     SGNRNFDGRIHPYAKQAFLASPPLVIAYAIAGTVRFDIEKDVLGVDADGNEVRLKDIW
                     PSDAEIDAVVKASVKPEQFRKVYNPMFNVRVEHGAAVSPLYDWRPQSTYIRRPPYWEG
                     ALAGERTLAGMRALAVLPDNITTDHLSPSNAIMASSAAGEYLAKMGLPEEDFNSYATH
                     RGDHLTAQRATFANPKLFNEMVRNDDGSVKQGSLARVEPEGKVMRMWEAIETYMDRKQ
                     PLIIIAGADYGQGSSRDWAAKGVRLAGVEAIVAEGFERIHRTNLIGMGVLPLEFKPGT
                     TRLTLGIDGTETFDVVGARTPRAELTLVIHRRDGQDVIVPVTCRLDSDEEVAIYEAGG
                     VLQRFAQDFLEGAKVA"
     gene            complement(12798..13955)
                     /gene="prpC"
                     /locus_tag="QEL58_002027"
     CDS             complement(12798..13955)
                     /gene="prpC"
                     /locus_tag="QEL58_002027"
                     /EC_number="2.3.3.16"
                     /EC_number="2.3.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-methylcitrate synthase"
                     /protein_id="HDS1676505.1"
                     /translation="MNDTTATPTFKPKKSVALSGTAAGNTALCSVGRSGNDLHYRGYD
                     ILDLANTSEFEEIAYLLVHGKLPTRAELVSYKAKLKSLRGIPAAVKAALEELPPSAHP
                     MDVMRTGVSVLGCVAPEKDDHNHPGARDIADKLMACLGSMLLYWYHWSHNGRAIDVET
                     DDDSIGGHFLHLLHGEKPQDSWVKAMHTSLILYAEHEFNASTFTCRVIAGTGSDMYSA
                     ICGGIGALRGPKHGGANEVAFEVQKRYDNPDEAEEDIKARVERKEVVIGFGHPVYTVS
                     DPRNKVIKDVARELSEEQSSMKMYDIAERLESVMWDIKKMFPNLDWFSAVSYHMMGVP
                     TAMFTPLFVIARTAGWSAHIVEQRIDGKIIRPSANYIGPEDRDFVAIDKRV"
     gene            complement(13992..14885)
                     /gene="prpB"
                     /locus_tag="QEL58_002028"
     CDS             complement(13992..14885)
                     /gene="prpB"
                     /locus_tag="QEL58_002028"
                     /EC_number="4.1.3.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010482769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylisocitrate lyase"
                     /protein_id="HDS1676506.1"
                     /translation="MTASTPFSAGARFREALAAESPLQVIGAINANHALLAKRAGFRA
                     IYLSGGGVAAGSLGLPDLGINTLEDVLVDVRRITDVCDLPLMVDIDTGFGPSAFNIAR
                     TVKSLIKAGAAACHIEDQVGAKRCGHRPGKEIVSQGEMVDRVKAAADAKTDPDFFLIA
                     RTDAIQVDGVDKAIERAIACVEAGADGIFAEAAYDLDTYRRFVDAVKVPVLANITEFG
                     ATPLFSRDELASAGVAIQLFPLSAFRAANKAAENVYQAVRRDGHQRNVVETMQTREEL
                     YDRIGYHAFEQQLDALFAAKK"
     gene            15040..16623
                     /gene="prpR"
                     /locus_tag="QEL58_002029"
     CDS             15040..16623
                     /gene="prpR"
                     /locus_tag="QEL58_002029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005418363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="propionate catabolism operon regulatory protein
                     PrpR"
                     /protein_id="HDS1676507.1"
                     /translation="MYLPRSPLRHADTDPGRPVIWTVSVSRLTGLLGDVIPEFDRRAR
                     IEQINLGFEEAVDVIGQRLRREHCDVVIAGGSNAAWLRGRLDLPLVPIQANGFDLMEA
                     LARARRIASRIGLVTHASDVPVFSNFQQSFGLDIEHRRFVTREDARDCIADLRANGIE
                     VIVGTGMAIDHAEQAGLPGVLLYSADSVRQAFEHALELTQALARSGGTRPAPRRRAAS
                     RADAHELLGDSDAMAQVRAQIALYAPHDSTVLVSGETGTGKELVARQLHAASARRGRF
                     VALNCGAISESLLEAELFGYSDGAFTGARRGGRVGLVEAADGGTLFLDEIGELPLPLQ
                     TRLLRVLEEREVLRVGATEPTPVDLRVVAATLQSLEQRAAAGSFRRDLYYRLAALRIA
                     LPALRARRSDIALLTQHFFRQLRGIDAPLDEAAMTTLTNAEWPGNVRELRNLVDRLRI
                     HWQPGEELINTARLMQLAPELMREGTPAMPVESNGKRPPRAQLEAVLQEHRNDREGMA
                     QALGVSRTTLWRWLRAEGL"
     gene            complement(16701..17174)
                     /locus_tag="QEL58_002030"
     CDS             complement(16701..17174)
                     /locus_tag="QEL58_002030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HDS1676508.1"
                     /translation="MPSWRCLFAVPSPRRGVEASLLLLARIVAGVMFCVSGWNKVFTE
                     AGRERMVHTLVDAGIPFPVFNAPVLGAIEWIAGGLLVLGLLSRPSALLLAAICAVAAL
                     TDGIARIPAGLSVPDWLSWFFYLSEVPLGVLLLWIAAVGSGRFAIEARWARSRHL"
BASE COUNT         2897 a         5731 c         5689 g         2944 t
ORIGIN      
        1 cccgtccgcg cggtcacggc tgcaccaccg tgatcgtggt cgggttgctg cggcccacgc
       61 cacgcagctg cgggcggtac atgtcctcca ccagcggcgg cggcaccgag taggtacccg
      121 gggtcaccgc acgcaccagg tagaacacgc tggccttgct gccacgcgag agcttcagcg
      181 cggccacata gcggtcgtcg cggaactctt cgtgcttggt atcggccgct tcaccgcggt
      241 cgctgatggt gatgccatcg accaccacgt cagcccactg cttcgcatcg cccaggttga
      301 agttctcgat ctccaggccg gccggcagca ggtcggtcaa cagcgcgtcg ggcatcgtgg
      361 tatcggcggt gacggtgacg cgcacgatca gcgcctcgcc ttccttcagc gggcgcggcg
      421 accatggctt gccatcggtg ccgtagtagc tgcgctcgat gccgagcacg ctgttgtccg
      481 gtgccggcgc gctgcgcggg atgccggcca cgtcgatgct ggcgaacatc ggcggctggc
      541 cctgcggggt gaagcgcacg ccactggcca gctcgctggc gctgaagttg cggccgaaca
      601 gcttgcgttc gctgatcgct tcggtcgtgc cgccgatcac cagctcaccg gccaccagcg
      661 ctttctggtt ggcggccagg gccttgccga ggcgggcgat ggccacctgt tcctgcgtgc
      721 tcagccacat ccagccggca ttgcggcgcg cgtccaggcc acggccgagg tccaccgcac
      781 gtgcgtccca ggccggcttg gccagcttgt tttcatgggt cagcgcgatc atcagcgcgt
      841 catcacggat cgcgctgccg tagtcaccga agtacgacgg gcgttcgctg ctggatttgg
      901 cgaaggccgc ggccagcgcg gcctggccac gcttggcatc gccctgcagc gacagcgcca
      961 cgcccaggtg gaccagcgac aggccgccga ccgccttgct gcgctcgttg tcgtacagcg
     1021 tgcgcagggt acccagcggc gcgcggttca cccgggccag cacgtagccc gaatacgcct
     1081 ggttggcgaa cttcagcttc tcgcgatcgt cctggccgta gaactggttg ccaccggaca
     1141 gcaggtcctc gctgaggcgg ttgagcgcct tctgcagcac gttgtcgggc accgcgaagc
     1201 cggcgtcctt ggcgtcgagc aggaactcgg tgatgtacgg ggtcagccac gggttcacgt
     1261 agccatcgtc accccacatc gagaagttgc cgttggccac ctgcatcgac gccaggcggc
     1321 cgaacgcgcc ttccatgcgc tcgcggcggg tcttggcgtc caggccgtcg gcgccaagca
     1381 tcgacgacgt ggcctggtcc aggatcagcg cggcgtagcc cttgctggtg gtctgctcgg
     1441 cacagccata cgggtagttc aacgcgccct gcagcgcact ggcgaacggg atcggcggca
     1501 gcgggctgac cagcaggcgc gcattcaccg actcggacat caggccatcg gtcaggctgt
     1561 tgtcgaggct gaccgcagcc agcggatcga gcgtgcgcac ctgcgaacgc agcacctgcg
     1621 gccaggccgc acgcaccggc agctcgtaac ggcggtcagc cttgaagccg ttgccgtcca
     1681 cgcgcacgcg caccttggcc acgctgtggc cctcgcgtgc cgacagcggg aagctcagcg
     1741 tggtcttggc atcggcattc aactgcacgc tgcggctgcc ctcgcccagg ttcagcgggc
     1801 cctcgctgtc caccttcacg ttgaactggc cgggcttgcc ggtgaagttc tgcacgtcca
     1861 gggtcacggt gctgcggtcg cccggcgcca gcacgcgcgg catgctggcc tcggccagga
     1921 tcggcgcacg caccacggtt tccacgtcgc gcttgccgta ctggtcatcg ctgtagacca
     1981 gtgccgacac gcgcagggtg ccgttgaagt cgggcacctt caggcggatg cgggcgatgc
     2041 ccttggcatc gagctgcacc gggccggaga acaggtccac ggtctgcacg cgggcggtgg
     2101 ggcgcttggc ctgcggcaac gcctgcagcg ccatgtcacc gccgaacttc agcttgccgg
     2161 cgccaccgtc gaagctctcg atcacccggc tgtagatgtc gtaggcatca atgccgagac
     2221 gacgctgcgc gaagaagtgc gcgccggcat ccggcaccgg gaagcgggtg atgttgagga
     2281 tgcccacgtc caccgccgac acggtgacgt gtgcggtctt gcccgccagc tgcggtgcgc
     2341 tgaccgttac cggcaggtcc tgctccgggc gcatctgctt gggcgcgacc aggccgacgg
     2401 ccacggtgcg gcccttgcgg tccatcggca catgcaccac gcccacggca cgcgccgggg
     2461 tgatcttgct cggcgcactg ccgccacgga acaccagcgc ggtgatgtag acgtcgtgcc
     2521 gctcccagtc ggcagtgacc ggaatcttga aggtcgaacc cggcttggcc tcgatgtcct
     2581 gcacgtacag catgcggtcg gtctcgacca tcaggatgcc cttgccggcg tgcggcgggg
     2641 tcaccgtcac ttccagcgtg tcaccggcct tgtagccggt cttgtccagg cccagcttga
     2701 ccttgtccgg gcgtgcgtcc aggccgcggt tgtcatcgcc ccagctccag ccggcgcgga
     2761 acgggtagcg gctggtcagg ccggtggacg gatcgaacac gtccacccgg tactcgcccc
     2821 actccaccgg gaaatcgaag gcgaccgcgc tgctgccggc atcgacggta cgggtttcct
     2881 tgttctcgaa gcggcgggtg aaatcgtagt cccagcggtt gtcgttgaag gtccagtgat
     2941 aatcgcgcag ttcgcgcacc agggtgatct tcaggccctt ggccggctgt gggttaccgg
     3001 cggcgtccac gcgcatcagc tcgaagcgcg cattgccgtt ggaatcggcg ccatcatcgg
     3061 ggttgaacag cgggcgcacg ccgaccagcg cattggccgg ccacatcacc cgcttcaggg
     3121 tacgggtgac cgtgcggcca ccggtttcat acaggctgcc ggacagcacc accgcgatcg
     3181 gcgccttggc cttggccgcc tcttccggca aggccacgtc ctcgcgcagc tggccattgg
     3241 ccggcagcgt ggtatcgacc acgtccttgg cctcgcgcgg cagctgcagg gtcgggtcgc
     3301 cgaagaagta gcccggcagg ccgtccaccg gcttctgttc ggccgccacc gccatgcgcg
     3361 cggtgaagcg gttgccatcg gccggcgcgc catacaggta cgcgccgttg gcctgcaggc
     3421 gcagctcttc gcccggcttc agggtcttct gtgcgctgtc caggtccagc ttcatgcgct
     3481 cgggcaggaa ctcctcgatg cgcagggtca tgccctggat cgcttccttg ctggccgggt
     3541 cggtacggaa ctcgacctgc cagcgcccgg tcggcgcttc ggccggaatc acctgctcga
     3601 agttgatgta gccctggtcg cccggctgca ggcgggtctc gcggaaggtc ttgccgtcgg
     3661 gctgcttcag gcgcaggaat accggctgag ccttgaccgg cttgccatcg ttgtcgcgca
     3721 gcagtgcgga caggcgcacg gtctcgcccg ggcgatacag gtcacgcccc gaccacgcgt
     3781 agacgtcgaa ccaggcattg tcacgaccgg ccacggcgaa ttcgctcagg tccagcgccg
     3841 gctggttgaa cggcaggaag ctggtgtcct tgccgctgct ggcgaccagc acatgggtcg
     3901 catccagggt gtagttcagc aacgcgttgc cgttgccgtc ggtgctgccc ttcaggacca
     3961 cctcgccctt ggcatcgagc acgcgcaggt cgatgccctt cagcggcgcg ccgtccttca
     4021 ggccggcggt gtgcacgaac agcttgtcct tgtaggcacg ggtatgcagg ccgatgtcac
     4081 tgaccgagaa gaacgcggta tcgaactcgc cttcatagtc accggtacgc ttgagcaggg
     4141 cgaaatacag gcccggctcc tgcagctcct tgatgtcctg ggtcggcagg taggtcagca
     4201 cccgctcgtt ctgcttgcca ccgaggatga agcggttgac gtagaccggc tcggccagct
     4261 tgttgatcgg gctgcgctcg tagtcgctgc tcagttccca gctgccacgg cggccgccgc
     4321 gctggtactg gctgaagaag gtcggcaggt ccttctcgcg cacgcgcagg aactcgacgt
     4381 cgacctccgg cacgttcacc gagaccaccg gcaggccgcg gctgtccttg gccggcagca
     4441 cgctgccctg cgaggcgaag ccgaccaccg gcttcagctc gccgctgaac accttctgct
     4501 tcagttcctt gcccaggcgg ctgccatcgg cggccagcag gtccggcgag accaccaggc
     4561 tgaattcctt gccggcctcg acgaacgggt agcgcagggt caggccgtcg tcggacagcg
     4621 tccagctgct gtcatcggtg ccgaccttct cttcgaagcg caccagcttg tcgaagtcct
     4681 gggtgccgac cagcgggcgc gagaactcca gcgccagcga caggccgtca ttcttctggt
     4741 ccgggtaggc gcgcagcagg gtgaactcct tcacctgctc ggctttggtg gtgatcgctt
     4801 caccgctggt cttgggcaac tgcccactgt cgttgcggca gccggccagg cccagcaaca
     4861 ggcctcctgc cagtaccgcc gccgcccatc cccaccgctt ccgccgcgcc ggaccgctca
     4921 tgtcgtcact ccttgatcga ggtggccatt ataggcgcgc cgcgtcaagg tgttgacgcc
     4981 ccgatggtcg gaaaacgggt cctgggataa cgccggtcca tgcccggcgg atcgatcctc
     5041 gccaggcggg tacccgggtg gcgccccggt cgcggcgctg cccgggcatc gacagcccac
     5101 caagtcgcgc gatgccccct cccccgcgca cgaagccaaa accgttcact agtgtcggaa
     5161 atgacctccg accagcccat tgccgaccca cctcgaatca tcgctgtagc atcggctgtc
     5221 cgcccgactg gcaaaggcaa cccaacgtga caagagagcg cttgcttcag gatccaacga
     5281 ccggaaaggt ctggggtacc cgctgtgaag gttccgctgt ggaagtgact tctggcaacg
     5341 ctgcaaaacc gaagttggag ctgaagaact tcccaggccc aggcgaagcc gctggatggg
     5401 cagtcaagca ggaatggtcg cggctgaaga agggcttcgt actgctaaac cctgtcgctg
     5461 aggctgggca accgagcatg cacaggtaca tcggcggtgg ctatacgggg gcactgatga
     5521 ttgccgggcg ccatggcagg atggtgacca accgttatca ggatgaggat gcgtctggtg
     5581 cagcgaccga catgctgctg ctggttggtg acgacgccgg gatcctccat gattggcgac
     5641 ccgggaaaac ggatcttgca tggtcggcac tccctgcgga tgacggcaaa gggttcctga
     5701 tccgattcga ctccggcatt tacctttggc catccgatgg ccgtcctccc cagcggatca
     5761 gcgatgcaac ggtgatgtca tcgccgttcc tgacaacctc caacggatac gtcgcgtggc
     5821 atgacggtga tcatgtaacg gtaatgagac ttgccgatga acagcgcttc ctaaagttgg
     5881 cacgtacccc ggcgatggtg ggcgggcatt cgaggcagat gatgggcgcg ctctctccgg
     5941 atgccacgac gcttgcctgc tgcgccactc ccggtgagat cgagtacatc gatatcgctc
     6001 aagcggatac tgtccgccga catcgaagtg acttcgaaat gatcaccaag atggagtgga
     6061 gtgccgacgg gcgttggctg ctggcattgg agcaatatgg agaatggcgc ctgttgtgcc
     6121 tggatgcggc aacgggagaa tgccgtcccg ggtggccgaa gttcgctgac atgacacgaa
     6181 ctgactttgc gctggatagc gatagcaagc gactcgccat cctgcaccgt ggacatattg
     6241 cccttcatga cttcacggat atgagggaaa ttcgacgctt tcccgtagat catgtggtcc
     6301 gtaccgcgca tattgcatgg acgggagaca atgccatttc ggtgcgcacc gactatggat
     6361 gcctttccac atatgcgatc tgatccggcg cacaccctgg tagccgccaa ccttggttgg
     6421 cgccctcatg ccaaccaaga ttggcaccca ccaacgcgcc cctaccccgg caggtacaga
     6481 tccacgtagt cggtcaccgg catcgccgcc agtgccaccg ggtccagcga cgcggccagg
     6541 atgcgttgct gctggacggt cgggaaacgg tgggccaggt gccggcggaa cttgtccatc
     6601 agcagcggga tgccttcctc gcggcgccgg gcgtggccga gcgggtactc caccagcacc
     6661 tccggcagtt cgctgccatc ggtgaaacgc acgctcaggc cgttggcgat gctgcgcttg
     6721 tccgggtcaa ggtaatcggc gctgagccgt gggtcttcat ggcaggccat cttcgcgcgc
     6781 agcgcgtcga tgcgcggatc ggcggcaacg tcgtcctcgt aatcctcggc caccagccgc
     6841 ccatgcagca gcgcgatggc gaccatgtac tgcacgcagt ggtcgcggtc ggccggattg
     6901 tgcagcgggc cttgcttgtc gatgatgcgg atgcaggctt cctgggtgcg gatcgcgata
     6961 tgcgcgatgt cttcgacccg gcgccccatc gcgcgcagct gctggtgcag cgtgatcgcg
     7021 gcctcgaccg cggtctggcc gtggaactcg gccgggtagc tgatcttgaa cagcacgttc
     7081 tccatcacat agctgcccag cggccgcccc agcgtcagct gctggccatg catcgacact
     7141 gcctcaaagc cccaggtcgg tgcgctcagc acgcttgggt aacccatctc gccactggcc
     7201 gccatcaagg cgaggcgcac gccacggctg gtcgcatcgc ccgccgccca gctcttgcgc
     7261 gagccggtgt tgggcgcatg acggtaggtc cgcagcgcct ggccatcgac ccaggccagc
     7321 gacagcgcat tgagcatgcg ttcgcgatcc agcccgagca ggtgcgcgac caccgccgtg
     7381 gtggccacct tgaccagcac cacatggtcc aacccgaccc ggttgaacga attccgcagc
     7441 gccagcacgc cctggatctc gtgcgccttg atcatcgcca gcagcacgtc atgcagggtc
     7501 ggcggcgggc gacgcagggc ccgtgcgttt cgccccagcc aatcgcagac agcgaggatg
     7561 ccgccgagat tgtccgaggg atgcccccat tcggcggcca accaggtgtc gttgaaatcc
     7621 agccagcgca ccatcgcgcc gaggttgaag gcggcctgca ccgggtccag cacgtagtgc
     7681 gtacccggta cgcgcgcacc gttgaccacg ctgatgcccg gcaccagcgg cccgagcagc
     7741 ttgctgcagg ccgggaaaga caacgcttcc agcccgcagc ccagcgtatc gagcaggcag
     7801 tgatgcgcgg tctggaacgc cagcggtgag tcgatgcgcg cgtcgcgcac gtagtcgaca
     7861 atgtccacca gcagcgcatc ccacgctgca cgttcgttgg atggggtggc gttgtcggac
     7921 atcgtcgatc tcctcttcag aaaagcaggt caggccgcgc atcccggtag tcgccaacct
     7981 tggttggcgc tggacgttgc ccgggcggtg ccgatgccat gccaaccaag gttggcatct
     8041 accgaagcgt gtgatgccag cgccgaccgc ctggttactc ggccggcacc cgcaccttgc
     8101 cttccatcaa tacgcgggca ctgcggctca tgatggcctt ggtcaccgtc cactggccgt
     8161 caacgcgtcc ggcctgcgca cccacgcgca gcgtgccgga gggatggccg aaggtcaccg
     8221 cctcgcgttc gccgccaccg gcggcacgat tgaccagggt gcctggaatc gccgccgcgg
     8281 tgccgatcgc cacggccgcg gtacccatca tcgcgtggtg cagcttgccc atcgacagcg
     8341 cacgcgcgtg caggtcgatg gccgaggccg caatggcctt gccgctggac gatacgtagt
     8401 cctgtgccgg cgccacgaag gccaccttcg gcgtgtgctg gcgggtcgcc gcgtcttcaa
     8461 gtttcgagat caggcccatg cgcagcgctc catgcgcacg gatggcttcg aacttctgca
     8521 gcgccgcctt gtcctcgttg atcgccggct gcagttcggt gccggtgtag cccagatcgg
     8581 cggcgttgag gaagatggtc ggaataccgg cggtgatcat ggttacctcg aagctgccca
     8641 cgccgggtac gtcgagggtg tccaccagat tgccggtggg gaacatcgcg ccggcatcac
     8701 cgtcgtcgga gggatcgatg aattccagct ggatttcggc ggccgggaag gtcacgccat
     8761 ccagctcgaa atcgccggtc tcctgcactt gcccatcgcg catcggcacg tgggcgatga
     8821 tggtcttgcc gatgttggcc tgccagatgc gcacggtaca caggccatcg cgcggcacgc
     8881 gggcgggatc gatcaggccg ttggcaatcg caaacgggcc taccgcggtg ctgagattgc
     8941 cgcagttgcc gctccaatcg acgaaggcgg tgtcgatcga gacctggccg tacagataat
     9001 ccacgtcgtg gtcaggcacc gaagcggcgg aaatgatcac gcacttgctg gtgctggagg
     9061 tggcaccgcc catgccgtcg gtctgcttgc catacggatc gggcgaaccg atcacgcgca
     9121 tcagcagtgc atcgcgtgcg gcgcccggca cctgcgcggt ttcaggcaga tcctgcaggc
     9181 ggaagaacac gcccttgctg gtgccaccgc gcatgtaggt ggcgggaata cggagttgcg
     9241 gaaggaagct catgacattc tcgataaggt aaggaacacg cactacgcag gctgcaaccg
     9301 ctgtcgccga cgatctgcgg cggaggcccc ctgctgccag cggaacagat acaggatgac
     9361 cagtttggtg ctgccgctca ccacggccag cagcagcaac ggccatccca tctgcatccc
     9421 catggcgaag gcaaacacga tcgtcgacag gtccatcagc aggatcaact gactcatccg
     9481 cagcgacact gcaccggtat ggccattgcg caggatcagc aggatctgat gcgtgtagcc
     9541 ctgcgccagc aaggcagtaa tgaccactat catcgcgctg gcgactaccc tgccctcatc
     9601 cacatgccgg tcaccccagg ccagcccggc cagtgcgcag agcaacaaca gggcggctgt
     9661 cagcacgctg gtcgtagcgg agcggctccg tcggtcgcgc cagatctcca ccaggatggc
     9721 catgaccagt accgacgcga gcaagcgcgg ccagacaatg aagtgattga acggcgtgat
     9781 gctgtagcca tagacgaaga aggacaggta ggccaggaag ctgaccgtga actggttcag
     9841 cgaaagcacc gcagtggcgc tgtcagccgc gcccgcacgt tcccggcggc ggcgcaccag
     9901 ccgcagctgc gcgcccacac ccaacaggct cagcaggatg aaggcggtgt tgaccgtacc
     9961 tgcgatgttg tagaacgcgg ttcccatgca gatggggcaa cgcccctctc cttcgtgacc
    10021 accgccatgc gggccgaagc cagcatggcg gcaactcgac acaaggcagc cagctgctgc
    10081 cttacgccac cttggcgcct tccaggaagt cctgggcgaa gcgctgcagc acgccgccgg
    10141 cctcgtagat cgccacttcc tcatcgctgt ccaggcggca ggtgaccggc acgatcacgt
    10201 cctggccatc gcggcgatgg atgaccaggg tcagctcggc gcgcggggtg cgcgcgccga
    10261 ccacgtcgaa ggtctcggtg ccatcgatgc ccagggtcag ccgggtggtg cccggcttga
    10321 actccagcgg cagcacgccc atgccgatca ggttggtacg gtgaatccgc tcgaagccct
    10381 cggccacgat cgcttccacg ccagccaggc gcacgccctt ggcggcccag tcacgcgagc
    10441 tgccctggcc gtagtcggca ccggcgatga tgatcagcgg ctgcttgcgg tccatgtagg
    10501 tttcgatcgc ttcccacatg cgcatgacct tgccttccgg ctccacgcgc gccagcgaac
    10561 cctgcttcac gctgccgtcg tcgttgcgca ccatctcgtt gaacagcttc ggattggcga
    10621 acgtggcgcg ctgcgcggtc aggtggtcgc cgcggtgggt ggcgtacgaa ttgaagtctt
    10681 cttccggcaa acccatcttc gccaggtatt caccagcggc actggacgcc atgatcgcgt
    10741 tggacggcga caggtggtcg gtggtgatgt tgtccggcag caccgccagc gcgcgcatgc
    10801 cggccagcgt gcgctcaccg gccaatgcac cctcccagta cggcgggcgg cggatgtagg
    10861 tgctctgcgg gcgccagtcg tacagcgggc tgaccgcagc gccatgttca acgcgcacgt
    10921 tgaacatcgg gttgtagacc ttgcggaact gctcgggctt caccgaggcc ttcaccacgg
    10981 catcaatttc agcatcgctc ggccagatgt ccttcaggcg cacctcgttg ccgtcggcgt
    11041 ccacgcccag cacgtccttc tcgatatcga agcggacggt accggcgatg gcgtaggcga
    11101 tcaccagcgg cggcgaagcc aggaaggcct gcttggcgta cggatggatg cggccatcga
    11161 agttgcgatt gcccgacagc acagccgtgg cgtacaggtc acgatcgatg atttcctgct
    11221 ggatcttcgg gtccagcgcg ccactcatgc cgttgcaggt ggtgcaggcg aacgccacga
    11281 tgccgaaacc cagctgttcc aggtccggca gcaggccgga ctcttccagg tacagctgca
    11341 cggccttgga acccggcgcc agcgacgact tcacccacgg cttgcgctgc aggccacgcg
    11401 cattggcatt gcgcgccagc agcgcggcgg cgatcacgtt gcgcggattg gaggtattgg
    11461 tgcagctggt gatggccgcg atgatcaccg cgccatcggg catcaggccc tgcgcctgct
    11521 cggccttgcc cgcttccagc ttggcttcgt cggcgatgcc gcgctcggcc agctcggcgg
    11581 tggccacgcg cttgtgcgga tttgacgggc cggccatgtt gcgcaccacg ctggacaggt
    11641 cgaagcgcag cacgcgctcg tactgcgcgg tggccaggtc gtcggcccac aggccggtgg
    11701 tgcgcgcgta gttctccacc agcgcgacct gcgactcctc gcggccggtc aggcgcaggt
    11761 agtcgatggt ctgcgcgtcg atgtagaaca tcgccgcggt cgcgccgtat tccgggcaca
    11821 tgttggagat ggtggcgcgg tcaccgatgg tcagtgccgc cgcaccctcg ccgaagaatt
    11881 caagccacgc gccgaccacg cgctccttgc gcaggaactc ggtcagggcc agcaccacgt
    11941 cggtggcagt gatgcccggc tgcgggcgac cactcagttc gacgccgacg gtatcgggca
    12001 ggcgcatcca tgaggcgcgg ccgagcatca cgttctccgc ctccagtccg cctacaccga
    12061 tcgcgatcac acccagcgca tccacgtgcg gggtatggct gtcggtgccc acgcaggtat
    12121 cggggaacgc aacaccgtcc tgcacgtaga ccaccggcga catcttctcc aggttgatct
    12181 gatgcatgat gccgttgccg ggcggaatca cgtccacgtt ctggaacgcc agcttggtcc
    12241 agtcgatgaa gtggaagcgg tcttcgttgc ggcgatcctc gatggcgcgg ttcttctcga
    12301 acgcctgcgg gtcgtaccca ccgcactcca ccgccagcga gtgatcgacg atcagctgca
    12361 ccggcaccac cggattgacc ttggccggat caccgccctt gtcggcgatc gcgtcgcgca
    12421 ggccggccag atcgaccaat gcggtctggc cgagaatgtc atggcagacc acgcgggccg
    12481 ggaaccacgg gaaatcgagg tcgcggcggc gctcgatcag ctgcttcagc gaatcgctga
    12541 gcgtggccgg atcgcagcgg cgcaccaggt tctcggccag cacgcgcgag gtgtacggca
    12601 gggtggcata ggcgccgggc tggatcgcat cgacggcggc acgcgcgtcg aaatagtcca
    12661 gcgcgctgcc gggaagggtc ttgcggtaat cggtattcat gggctggcgg agtgcttggg
    12721 gcgggccgga tgccggcggt gcggcggcga aagcacccgg ccggcatagg gccggccgga
    12781 tggatacagc aggtggatca gacgcgcttg tcgatggcga cgaagtcgcg gtcttccggg
    12841 ccgatgtagt tggcgctcgg gcggatgatc ttgccgtcga tgcgctgctc gacgatgtgc
    12901 gcgctccagc cggcggtgcg ggcgatcacg aacagggggg tgaacatggc ggtcggcacg
    12961 cccatcatgt ggtagctgac ggcgctgaac cagtccaggt tcgggaacat cttcttgatg
    13021 tcccacatca ccgattccag gcgctcggcg atgtcgtaca tcttcatgct cgactgttcc
    13081 tcggacagct cgcgggccac gtccttgatc accttgttgc gcggatcgga gacggtgtag
    13141 accgggtggc cgaaaccgat caccacttcc ttgcgctcga cgcgggcctt gatgtcttcc
    13201 tcggcctcat cgggattgtc gtagcgcttc tgcacttcga acgccacttc gttggcgccg
    13261 ccatgcttcg ggccgcgcaa cgcgccgatg ccaccgcaga tcgcgctgta catgtcgctg
    13321 ccggtgccgg cgatgacgcg gcaggtgaag gtcgaggcgt tgaactcgtg ctcggcgtac
    13381 aggatcagcg aggtgtgcat cgccttcacc cacgaatcct gcggcttctc gccatgcagc
    13441 aggtgcagga agtggccgcc gatcgagtca tcgtcggttt ccacgtcgat ggcgcggccg
    13501 ttgtggctcc agtggtacca gtacagcagc atcgaaccga ggcaggccat cagcttgtcg
    13561 gcgatgtcac gggcgcccgg atggttgtgg tcatccttct ccggtgccac gcagccgagc
    13621 accgacacgc cggtgcgcat cacgtccatc gggtgcgccg acggcggcag ttcctccagc
    13681 gcggccttga ccgcagccgg aatgccacgc agcgacttca gcttggcctt gtacgaaacc
    13741 agctcggcgc gggtcggcag cttgccgtgc accagcaggt aggcgatttc ctcgaactcg
    13801 ctggtgttgg ccaggtccag gatgtcgtag ccgcggtaat gcaggtcatt gccgctgcgg
    13861 ccgacgctgc acagcgcggt gttgccggca gcagtgccgg acagggcgac ggacttcttc
    13921 ggcttgaagg tcggggttgc ggtcgtatcg ttcatgtttt ccctccgaaa actgatggtg
    13981 cagggtactg cttatttctt ggcggcgaac agggcatcga gctgctgctc gaaggcgtgg
    14041 tagccgatgc ggtcgtagag ttcctcgcgg gtctgcatgg tctccaccac gttgcgctgg
    14101 tggccatcgc ggcggaccgc ctggtagacg ttctcggcgg ccttgttggc ggcacggaac
    14161 gccgacagcg gaaacagctg gatggcgaca ccggccgagg ccagttcatc gcggctgaac
    14221 agcggggtgg caccgaattc agtgatgttg gccagcaccg gcaccttcac cgcgtcgaca
    14281 aagcggcggt aggtgtccag gtcgtaggcg gcctcggcga agatgccatc ggcaccggcc
    14341 tcgacacagg cgatggcgcg ttcgatggcc ttgtccacgc cgtccacctg gatggcgtcg
    14401 gtacgtgcga tcaggaagaa gtccggatcg gtcttggcgt cagccgcggc cttcacgcgg
    14461 tcgaccattt caccctgcga cacaatttcc ttgcccgggc ggtggccaca gcgcttggcg
    14521 ccgacctggt cttcgatatg gcaggcggcc gcgccggcct tgatcagtga cttcacggtg
    14581 cgcgcgatgt tgaacgcgct cgggccgaag ccggtgtcga tgtcgaccat caacggcagg
    14641 tcgcagacat cggtgatgcg gcgcacgtcc accagcacgt cttccagggt gttgatgccc
    14701 aggtccggca ggcccagcga gccggcggca acgccgccac cggacaggta gatggcgcgg
    14761 aagccggcgc gcttggccag cagggcgtgg ttggcgttga tcgcgccgat cacctgcagc
    14821 ggcgattcgg cagccagcgc ctcacggaag cgggcaccgg cggaaaaagg agtggaagcg
    14881 gtcatgcggc aatccaggtt gaagaacgca ggggtaggcg caaacaccgt gccaagctgc
    14941 aagcggttga tttcaaaggc atgaccatgg cgcagcagtg aaacatatga aacattgaaa
    15001 cggatgtatc atgaaacatc attcgtcctt gccaccgcca tgtacctgcc ccgctcgccc
    15061 ctgcgccatg ccgacaccga ccccggccgc ccggtgatct ggacggtcag cgtctcgcgc
    15121 ctgaccggcc tgctcggcga cgtcattccc gagttcgacc gccgtgcgcg catcgagcag
    15181 atcaacctcg gcttcgagga agcggtggac gtgatcggcc agcgcctgcg ccgcgagcac
    15241 tgcgacgtgg tcatcgccgg tggctccaac gccgcctggc tgcgcggccg gctcgacctg
    15301 ccgctggtgc ccatccaggc caacggcttc gacctgatgg aggcactggc gcgtgcacgg
    15361 cgcatcgcca gccgcatcgg cctggtcacc cacgccagtg acgtaccggt attcagcaac
    15421 ttccagcaga gcttcggcct ggatatcgag catcggcgct ttgtcacccg cgaggacgcg
    15481 cgcgactgca tcgcagacct gcgcgccaac ggcatcgagg tgatcgtcgg caccggcatg
    15541 gccatcgacc acgccgagca ggccggcctg ccgggcgtgc tgctgtattc ggccgattcg
    15601 gtgcggcagg cgtttgaaca cgcactggaa ctgacccagg ccctggcccg ctccggtggc
    15661 acccgccctg ccccgcgtcg ccgcgccgcg tcgcgcgccg atgcgcatga gctgctcggc
    15721 gacagcgacg cgatggcgca ggtgcgcgca cagatcgcgc tgtatgcgcc gcatgacagc
    15781 accgtgctgg tcagcggcga gactggcacc ggcaaggaac tggtcgcgcg ccagctgcac
    15841 gctgccagcg ctcgtcgtgg acgcttcgtg gcgctgaact gcggcgcgat cagcgaatca
    15901 ttgctggagg ccgagctgtt cggttacagc gatggcgcct tcactggcgc gcggcggggg
    15961 ggccgtgtcg gcctggtcga ggcggccgat ggcggcactc tgttcctgga tgaaatcggc
    16021 gaactgccac taccgctgca gacccgcctg ctgcgggtgc tggaagaacg cgaagtgctg
    16081 cgcgtgggtg ccaccgaacc cacccccgtg gatctgcgcg tcgtcgctgc cacgctgcag
    16141 tcactggaac agcgcgcggc ggccggaagt ttccgccgcg acctgtatta ccgcctggct
    16201 gcgctgcgca ttgccctgcc cgcgctgcgt gcgcggcgca gtgacattgc gctgctgaca
    16261 cagcatttct tccgccagct gcgtggcatc gacgcgccgc tggacgaggc tgcaatgacc
    16321 acactgacca acgccgaatg gcccggcaac gtgcgagagc ttcgcaacct ggtggatcgc
    16381 ctgcgcatcc actggcagcc gggcgaagaa ttgatcaaca ccgcgcggtt gatgcagctg
    16441 gcaccggagc tgatgcgcga gggcacccct gccatgccgg tggaaagcaa cggcaagcgc
    16501 cccccgcgtg cgcagctgga agccgtgctg caggaacacc gcaatgaccg cgaaggcatg
    16561 gcgcaggcgc tgggcgtgtc acgcaccacg ctgtggcgct ggctgcgcgc ggaagggctg
    16621 tagagtcgag cttgctcgac tagagaaaat cagccgagca tggctcggcc ccacagaaaa
    16681 gcagtcgagc aagctcgact ctacagatgg cgcgagcgcg cccagcgcgc ctcgatggcg
    16741 aaccggccac tgcccaccgc agcaatccac agcagcagca ccccgagcgg aacttcgctc
    16801 aggtagaaga accagctcag ccaatcgggc acgctcagcc cggccggaat gcgcgcaatg
    16861 ccatcggtca gtgctgccac cgcgcagatc gcggccaaca gcagggccga cgggcggctg
    16921 agcaggccca acaccagcag gccacccgca atccactcaa ttgcgccgag caccggcgca
    16981 ttgaacaccg ggaacggaat gccggcatcg accagcgtat gcaccatgcg ttcgcggccg
    17041 gcctcggtga acaccttgtt ccagccggag acgcagaaca ttaccccggc cacgatgcgg
    17101 gcaagcagca gaagagacgc ttccacgcca cggcgcggtg atggcacggc aaacaggcaa
    17161 cgccaggagg gcatggcaac tccggatgtc gagggaatcg atcggagtgt gccggttgcc
    17221 agcctgctcg cagatgaagc gggccagtcc gaacacgaca a
//
LOCUS       DAOKIP010000073        17036 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.073,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000073 DAOKIP010000000
VERSION     DAOKIP010000073.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 17036)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17036)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17036
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.073"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            277..1569
                     /locus_tag="QEL58_002031"
     CDS             277..1569
                     /locus_tag="QEL58_002031"
                     /EC_number="6.3.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016903917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate synthase"
                     /protein_id="HDS1676509.1"
                     /translation="MGQSVVVLGAQWGDEGKGKIVDLLTEEIGAVVRFQGGHNAGHTL
                     VINGKKTVLHLIPSGILRDDALCLIGNGVVISPAALQKEIAELEASGVEVRSRLKISP
                     AAPLIMPYHIALDQARERAAGGKAIGTTGRGIGPAYEDKVARRGIRIADLHYPKQLEE
                     LLRTALDYHNFVLTKYLNTDAVDFQKTFDEALAFGEYVQPMKSDVAGILHDLRKQGKR
                     VLFEGAQGALLDIDHGTYPYVTSSNTTVGGALAGSGVGADSIDYVLGIAKAYATRVGG
                     GPFPTELDDEVGQGIRDRGAEYGASTGRPRRCGWMDIVALKRAVAINGISGLCITKLD
                     VLDGMEKLKVCIAYEYNGKRTEYAPLDAQGWEDCTPVYLEFPGWTENTHGITNWDDLP
                     PAARAYLRSLEELAGCPISIVSTGPDRDHTMVLQDPFA"
     gene            2248..2604
                     /locus_tag="QEL58_002032"
     CDS             2248..2604
                     /locus_tag="QEL58_002032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676510.1"
                     /translation="MTSRKTPPFHVVEPINDDANPADDLSTFQGCLTRIRDGEGSDGM
                     LWPEEALSDGRRQSLARIDRAAVGILTAVEMLHAANRCATMATPRRHLDEGVVEGLFF
                     ACRELAELVCREVRPA"
     gene            2760..3404
                     /locus_tag="QEL58_002033"
     CDS             2760..3404
                     /locus_tag="QEL58_002033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005418324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676511.1"
                     /translation="MKGETVARVALWLLWSLWALACIVLLLGAAANHLASRTQTLPLV
                     LQPGASAEITVYRFIDDPLRLRLRYADDGADPLVDPELRLRAETPTDRNEFRADTRSA
                     SATADVIRALESVEPDRFAASYFGYGRGDALPRGRSWLRLTVLAVDPALAGRAASVDL
                     LPPMDVLKLTDLDYLWLWPFFFWQPVALLLLIAGGGLAAASIALRRWRRRSPAR"
     gene            complement(3508..4152)
                     /locus_tag="QEL58_002034"
     CDS             complement(3508..4152)
                     /locus_tag="QEL58_002034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008267045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HDS1676512.1"
                     /translation="MRLSQLIVLGVLLGLGAGWWLRRDVAQPVAVAQPAPQPAVAATP
                     VKAPAAPQVDAAPSASVAPSANAGDTPTGLLLPVQGIEASQLRDTFTDARSEGRVHDA
                     IDIMADAGTPVLAVADGTVEKLFDSERGGLTIYQFEPSGRWCYYYAHLQRYADGLAEK
                     KVIKRGEVIGYVGSTGNASAEAPHLHFEVHVLGPEKQWWKGESINPYPLLRAGG"
     gene            complement(4157..5116)
                     /locus_tag="QEL58_002035"
     CDS             complement(4157..5116)
                     /locus_tag="QEL58_002035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019338665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein L,D-transpeptidase"
                     /protein_id="HDS1676513.1"
                     /translation="MPVPRPALLALSLLISPAFAQVPPPAQLPEPIAEKAGPDIAARS
                     PLHAQVLLDRANFSPGQIDGEVGSNQRRAVSGFQAAHGLTVTGELDEATWKALQADAN
                     APLASYTLTAEDVAGPFQPVPKGPAAQAKLKALGYGSVEESLGERFHASPELLKVLNP
                     GVDLGKAGNRIQVPNIAPAPLPKAAKVVVDKSDSTLQLLDAQGKVIAQVPVSSGSQHD
                     PLPIGEWKILGVYRDPPFHYNPKLFWDARKGEKKATLPPGPNNPVGRVWIDLSKPHYG
                     LHGTPEPGHVGKTESHGCVRMTNWDALRVADAVDTSVPVVMQE"
     gene            5352..7475
                     /locus_tag="QEL58_002036"
     CDS             5352..7475
                     /locus_tag="QEL58_002036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MCP four helix bundle domain-containing protein"
                     /protein_id="HDS1676514.1"
                     /translation="MNYLRNVRVAWRLGLGFGLLLLLVAAVVATGATASVVQKRAMQQ
                     VVDVSVAKVRLLSQMLDANNQMMVVRREMLIRQGDDRGHDEQRIADLVKRYEASWSAY
                     QALPSDADGKAIAETIAAKRALARPLNKQTSELMEQGDYPGAVALTLGPVQEAANGWN
                     KALSDGVDFEEKESRDAAAEAIRLGERSLLQLLVLGGVALLVGIAASVMIGRSLTGPL
                     ARAVNLAERLAKGELDQEFRLGGRDELTQLGQAMASVRQSVQAAIGAQLQMAEQHEAG
                     AIRYRMDASAFPGDFGRMVQATNSLVESHVQVELLMAEVMQRYAIGDLSRDLPDYPGE
                     KGALTRTLSAVKQSLMAINAQIDELARAARAGDFSMRGDAAAFQYQFKAMVEHLNGMM
                     ASSQASIADVSDVLRAISHGDLTARMDGEYDGVFARMRDDANTTTAQLTGIVRGIQVA
                     ADSINNAAQELAAGNNDLSRRTEQQAANLEEAAASMEELTSTVRQNAELARQADSEAH
                     AAGAAVRETEQAMAQMASVMGEIDQSSARISEISTVIDGIAFQTNILALNAAVEAARA
                     GEQGRGFAVVASEVRTLAQRAGVAAKEIKELIEDAAAKVKSGLAVTVESEAAIARVAQ
                     ASSRTTQLMSDIAAASKEQAAGIEQVNQVVVQMDQVTQQNAALVEEATAASRALEEQA
                     HALTTSVSVFKVEGAAVSAVPRRAA"
     gene            complement(7545..8036)
                     /locus_tag="QEL58_002037"
     CDS             complement(7545..8036)
                     /locus_tag="QEL58_002037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014038113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676515.1"
                     /translation="MPRGDKSAYTEKQKRQAEHIEESERQRGASEGTAERIAWATVNK
                     QDGGGKRSGSGRKSAGNTASKAPAKKSATTSAARKTAARKTAAKKAPAKKTAARKTTA
                     GKATTKKTAAKKAPARKAAAKKASTAASRSAAAKKAAKTRAAKKSVRKAAAKKAARTR
                     ASG"
     gene            8145..8867
                     /locus_tag="QEL58_002038"
     CDS             8145..8867
                     /locus_tag="QEL58_002038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HDS1676516.1"
                     /translation="MRVEPADIEALFDAIPDVLFFIKDRQGRYTHVNQTMLRRLGLRA
                     RKDVIGRTAAEIYPTGLSADYVDQDARVLSGEVIENLMELHLFANREPGWCLTCKRPL
                     LVDGAIEGLIGISRDLGQKDSLGTQYEQLRLALAHLNAHYAENVRMQTLLDITGFSLS
                     KLERSFRKVFQMTPQQVLTRLRIQMAMHLLHGDDSIACIGQACGFSDQSAFTRKFKAE
                     TGFSPRAYRARIGGNVGEPALA"
     gene            8950..10317
                     /locus_tag="QEL58_002039"
     CDS             8950..10317
                     /locus_tag="QEL58_002039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006383524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HDS1676517.1"
                     /translation="MPNSIPTASPSRLGHSLKPRQLIMMGLGSAIGAGLFLGSGVGVQ
                     AAGPAVLVSYLVAGALVIIVMNALGEMAAAKPTSGAFSVYAADAMGATAGATVGWLWW
                     VQLVIVIAAEAVGAAGLLATVWPSIPVPMAALAFMLFFTAINLLGVKNFGEFEFWFAI
                     LKVVAILAFIAIGVALLMGWLPQVTSPGLSNFTEHGGFAPKGLAGIGAALLVVVFAFG
                     GTEIVAVAAAETEDPERSIARAIRTVAWRILVFYIGSLSVIIAVVPWTSEALKSPFAA
                     VLDIARIPGAGTAITLIAVIALLSALNANLYGASRMMYSLAQRREAPAVLGWTDPRQV
                     PVVAVLASVLFGFAATVMELLFPDRVLPVLLNIVGSTCLLVWTLSLVSQLVLRRRADR
                     LGTRLPFRMAGFPWLTCCALAILALIFGLLLSESHTRLQFLSMVALTATIAAGSAIAR
                     RMREA"
     gene            10420..10830
                     /locus_tag="QEL58_002040"
     CDS             10420..10830
                     /locus_tag="QEL58_002040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HDS1676518.1"
                     /translation="MLRSRPFLMFTGQAEAALALYAEAFADFRLLALQRHPEGPGAGV
                     PGQVRQAIFLLGGTHYLCFDSLDVHGFTFTPSISLFVECSGAEQFERAARVLGEGGHW
                     LMPVGDYDFSNRYGWVQDRFGVSWQLSLGQMPDP"
     gene            complement(10923..13790)
                     /gene="gcvP"
                     /locus_tag="QEL58_002041"
     CDS             complement(10923..13790)
                     /gene="gcvP"
                     /locus_tag="QEL58_002041"
                     /EC_number="1.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019338660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminomethyl-transferring glycine dehydrogenase"
                     /protein_id="HDS1676519.1"
                     /translation="MSQNTPSLRELEHHSAFVERHIGPNDAEIAQMLDVVGHASLDAM
                     TDAIVPAKIKSPAPLALPESMTEVQALAKIRAIADKNTVLRSFIGQGYYGTHTPNVIL
                     RNILENPAWYTAYTPYQAEISQGRMEALINFQTLCADLTGMEIANASLLDEATAAAEA
                     MTLAKRSAKSKSDTFFVHDAVHPQTLELLRTRAEPMGIVLRVGTPAEALEAEAFGLLL
                     QYPDTFGQVGDYKALVDAVHARGGLVAVATDLLALTLLAAPGEWGADIVVGNSQRFGV
                     PFGFGGPHAAFMACRDAYKRSMPGRLIGVSVDAQGNPAYRLTLQTREQHIRREKATSN
                     ICTAQVLLAVMASMYAVYHGPDGLTRIARRTHRLASILAAALRTAGVQVGGDFFDTLH
                     VTGVHADEIHAKARAAGYNLRAIDSDSVGISLDETATRADVVALAAVFGAQADVDALD
                     ASTADALPAGLQRQSAFLTHPVFNTHHSEHELLRYLRSLADKDLAMDRTMIPLGSCTM
                     KLNATAEMIPVTWPEFSQIHPLVPADQALGYKELIDTLEAMLVECTGYDAVSLQPNSG
                     AQGEYAGLLAIRAYHRSRGEGHRDICLIPDSAHGTNPASAQMCGMKVVVTKTDANGNV
                     DVEDIRLNAEKYSDRLAAIMMTYPSTHGVFEEEVVEICEIIHKHGGQVYTDGANMNAL
                     VGVAKPGKWGSDVSHLNLHKTFCIPHGGGGPGVGPCAVKEHLAPFLPGKLGDHGPVGM
                     VSAASFGSASILPISWMYIAMMGSEGLRKATQVAQLNANYIAKRLAPHFKTLYTGRNG
                     LVAHECILDVRPLEKTSGIGAEDVAKRLIDFGFHAPTLSFPVAGTLMVEPTESESLHE
                     LDRFINAMIQIREEISAIEDGRLDREDNPLKNAPHTATAVTASEWTHAYPRELAAFPL
                     ASLKQSKYWPPVARVDNVYGDKNVMCACIPVDAYKDDEVEA"
     regulatory      complement(13853..13955)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00504"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="glycine riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="glycine"
                     /db_xref="RFAM:RF00504"
     gene            14256..15482
                     /locus_tag="QEL58_002042"
     CDS             14256..15482
                     /locus_tag="QEL58_002042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005418288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug effflux MFS transporter"
                     /protein_id="HDS1676520.1"
                     /translation="MTAAVAPSTRRMALLLAGLAMFGPFSIDTIFPAFPQLAQRLAVD
                     EVAVQQTISVYLLFYGLMSLAHGPLSDAWGRKRVILGGLVVFVGASVGCALSTDLTTL
                     LAFRALQGLSAGVGMIVGRAVIRDLYHGHDAQRLMSQVSMLFGIAPAIAPIIGGWILL
                     SGAGWPLIFWFLVVFALVLLAATARFLPETHPVEARVPLSPRVLMRDYVRIGFNPRFL
                     RLALAGSIGFGGIFLYISSAPVFVMQHLHLGEGGFAWLFIPTIGGMTTGSFLSGRMAG
                     HTTPTRQVAIGFALCALSALLNVGYVALAPQFVLPWAVLPIFLGGMGMALIFPILALA
                     VLDMYPHQRGLASSLQAFAQLMISTVVAGVVSPLLSASPLHLALGQAAFFALGFVFWY
                     WEHQRERVAQAACTGH"
     gene            15624..16520
                     /locus_tag="QEL58_002043"
     CDS             15624..16520
                     /locus_tag="QEL58_002043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="siderophore-interacting protein"
                     /protein_id="HDS1676521.1"
                     /translation="MAAQQTYRLFEVALKERRVLSPSLDRMVFTGADVARMKTEGPDQ
                     RIKVFFPLPGQDLPQVPSGEDWYPRYRALPDDQRPPMRTYTIRQLRAEQGEVDVDFVI
                     HGVTGPASRWAMHARPGDRVVLLAPDADCADSSEGWEWKPPAGVGQVLLVADETALPA
                     VAGILEELAALADPPRTLALLEVAQAGDAVPLTAPASAELVWLPRGQAAYGQPLLQAV
                     QERLAAASSVAAGDELEEIDVDAQILWEQADASVAGPLYAWVAGEAGAVMAIRRHLVR
                     DCGLDRRAITFMGYWRHGKVLD"
     gene            16589..16981
                     /locus_tag="QEL58_002044"
     CDS             16589..16981
                     /locus_tag="QEL58_002044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676522.1"
                     /translation="MSTSSKTRRDQRRRQEKQAANKVAAQASPVEPHAELRDAQRTLL
                     AGVVRRDGEWVLGMDGRIAGHSESAAQVLALIMQAGELHERNGTPVRLMYSDALRDAA
                     QAEAKEKGQTFEEFKAELAAAMAAKKNS"
BASE COUNT         2546 a         5634 c         5838 g         3018 t
ORIGIN      
        1 atgccaacct tggttggcat tgccggccag cggccggcac caccgggaag gcgcctgacc
       61 ggccggtgaa gccgcccgtc ggaaaggtgg cacccgaccc cggaaacccg gataatgcac
      121 aaaagccgga cgggcctccc cgttcggctt tttccgtgtc tgggccttcc atcgccggcc
      181 gctccccgtt tggagccgcc ttccaggtgc tggccagccc cgccacggtt tacccgtccg
      241 cggccccgat ggccgcaaca aatcgaggag cccgtcatgg gtcagtctgt cgtagtgttg
      301 ggtgcccagt ggggcgatga aggcaagggc aagatcgtcg atctgctcac cgaggaaatc
      361 ggcgccgtgg tgcgcttcca gggcggccac aatgccggcc acaccctggt catcaatggc
      421 aagaagaccg tcctgcacct gatcccgtcg ggcatcctgc gtgacgatgc gctgtgcctg
      481 atcggcaacg gcgtggtcat ctcgccggcc gcgctgcaga aggaaatcgc cgagctggaa
      541 gcctccggcg tcgaagtgcg ttcgcgcctg aagatctccc cggccgcgcc gctgatcatg
      601 ccgtaccaca tcgccctgga ccaggcgcgc gaacgcgctg ccggcggcaa ggcgatcggc
      661 accaccggcc gtggcatcgg cccggcctac gaagacaagg tggcgcgccg cggcatccgc
      721 atcgccgacc tgcactaccc gaagcagctg gaagaactcc tgcgcaccgc gctggattac
      781 cacaacttcg tgctgaccaa gtatctgaac accgatgcgg tcgacttcca gaagacattc
      841 gacgaagcac tggccttcgg cgaatacgtg cagccgatga agtccgacgt ggccggcatc
      901 ctgcacgacc tgcgcaagca gggtaagcgc gtgctgttcg aaggcgcgca gggtgcgctg
      961 ctggacatcg accacggcac ctacccgtac gtcaccagct ccaacaccac cgtcggtggc
     1021 gcgctggccg gttccggcgt tggcgccgat tcgatcgact acgtgctggg catcgccaag
     1081 gcctacgcca cccgcgtcgg cggcggcccg ttcccgaccg aactggacga cgaagtcggc
     1141 cagggcatcc gtgaccgcgg cgccgagtac ggtgcctcga ccggtcgccc gcgtcgttgc
     1201 ggctggatgg acatcgttgc gctgaagcgc gccgtggcca tcaacggcat cagcggcctg
     1261 tgcatcacca agctggacgt gctggacggc atggaaaagc tgaaggtctg catcgcctac
     1321 gaatacaacg gcaagcgcac cgagtacgcg ccgctggacg cacagggctg ggaagactgc
     1381 accccggtgt acctggagtt cccgggctgg accgagaaca cccacggcat caccaactgg
     1441 gacgacctgc cgccggccgc acgtgcctac ctgcgttcgc tggaagagct ggccggttgc
     1501 ccgatcagca tcgtctccac cggcccggac cgcgaccaca ccatggtcct gcaggatccg
     1561 ttcgcctgag gtaacgctgt tcaactgaaa aaagagcgcc gcgactccct gtagggtcgc
     1621 ggcgctttgt tttgggccgg tttcatctgt cggcagcccg tgccggctcc agtagtgcca
     1681 gcccatggct ggcagagccg aagccatcaa catgtcgctt ccagcacgcc aaattggccg
     1741 accacgtcaa attctcccaa gccacacacc cctcatgctc cccgcataca acttctggta
     1801 agcgataaac gtcacgcgcc attctgaagt cagagttgat cgcgtcaccg cacgtcgctc
     1861 ccatccgcgc accagcacag tcgcgcctgt tcctgtcgca tccaccgctc cccgcgcatg
     1921 caagaattcc cagagtgcgc tcgactcaac cgaaattttc ggatttttct cattgagccg
     1981 atcgtgcagg cgtagacacc atggcgcgcc accggaaaag ggtggccggg catgcaaacc
     2041 cgagataggt gttacttacg cttgccagcc ggcaccgtcc tgaagcggtg ccggctggca
     2101 atccgtcggc ctttatggcg ggcggtgcgt gggggtcttc ggacccgccg gtcattggta
     2161 actatctatc ccggtttgca acccgcaccg tccgccaccc gcttccgcgc ggtggcgctg
     2221 ttaagtacag ccacggaagc cgacgccatg accagtcgca agaccccgcc gttccatgtt
     2281 gttgagccca tcaacgacga cgccaatccc gccgacgatc tcagcacgtt ccagggctgc
     2341 ctcacccgca tccgtgatgg cgaaggctcc gatggcatgt tgtggccgga ggaggccctg
     2401 tccgacggac gacgtcagtc cctggcgcgg atcgaccgag cggccgtggg catcctcacc
     2461 gcggtggaga tgctgcatgc ggccaaccgc tgcgccacca tggcgacgcc gcgcaggcac
     2521 ctggacgaag gtgtggtgga agggctgttc ttcgcctgcc gcgaacttgc cgagctggtg
     2581 tgcagggaag tcaggccggc ctgacctcct ttcgcatgtg cgatgcccag cctcgccatc
     2641 gggcgaggta ccgggtgggg gcacgcgctg ctttgcgccg gcactgtggg cacgcgcagt
     2701 tctgcgctac gttgtggcca atgccagcag ggatgcagcg cgatgaccgg gggttcggca
     2761 tgaaaggcga gacggtcgca cgggtggccc tgtggctgct gtggagcctg tgggcgctgg
     2821 cctgcatcgt gctgctgctg ggtgcagccg ccaaccatct ggcctcccgc acgcagaccc
     2881 tgccactggt gctgcagccg ggcgcctcgg ccgagatcac ggtctatcgc ttcatcgacg
     2941 atccgctgcg cctgcgactg cgctatgccg atgacggcgc cgatcctttg gttgaccccg
     3001 agctgcgcct gcgcgctgaa acgcccaccg atcgcaatga gttccgcgcg gatacgcgct
     3061 cggcttcggc aacggccgac gtcattcgtg cactggaatc ggtcgagcca gaccgctttg
     3121 ccgcctcgta tttcggctac ggccgtggtg atgcattgcc gcgcgggcgt tcctggctgc
     3181 ggctgaccgt gttggcggtc gacccggcgc tggccggccg tgcggcctcg gtggacctgc
     3241 tgccgccgat ggacgtgctg aaactgaccg acctggacta tctctggctg tggccgttct
     3301 tcttctggca gccggtggcg ctccttttac tgattgccgg tggcggactg gcggccgcca
     3361 gcatcgcgct gcggcgctgg cgacgccgtt ctccagcccg gtagcgccgg gccatgcccg
     3421 gcagtgcact tgccagatag ccaatttggg taggatcgtg cccagatcgg gcatcactgc
     3481 gactggctct gccaagcggc agacgcgcta gcctcccgcc cgcagcagcg ggtacgggtt
     3541 gatcgactcg cctttccacc attgcttctc cggccccagc acgtgcacct cgaaatgcag
     3601 gtgcggggcc tcggcgctgg cattgccggt gctgccgacg tagccgatca cttccccgcg
     3661 cttgatcacc ttcttttctg ccagcccatc ggcatagcgt tgcaggtgcg cgtagtagta
     3721 gcaccagcgt ccgctgggtt cgaactggta gatcgtcagg ccaccgcgct cgctgtcgaa
     3781 cagcttttcc accgtgccat cggcgacggc cagcaccggc gtcccagcgt cggccatgat
     3841 gtcgatggca tcgtgtacgc gcccttcgct gcgtgcatcg gtgaaggtgt cgcgcagctg
     3901 cgaggcttcg atgccctgta cgggcagcaa caggccggtt ggcgtgtcgc ccgcgttggc
     3961 cgacggtgcc accgatgcgg aaggcgctgc atccacctgc ggagctgcag gcgccttcac
     4021 cggcgttgca gccactgcgg gttgcggggc aggctgggca acggccaccg gctgagccac
     4081 atcccggcgc agccaccagc cagcacccag gcccagcagc acgcccagca cgatcagctg
     4141 cgaaaggcgc atcgcatcac tcctgcatca ccacgggtac tgaggtatcc accgcatcgg
     4201 ctacgcgcag cgcatcccag ttggtcatgc gcacgcagcc atgcgattcg gtcttgccta
     4261 cgtggccggg ctcgggcgta ccgtgcaggc catagtgcgg cttggacaga tcgatccaga
     4321 cccggccgac tggattgttc gggcccggcg gcagcgtggc cttcttctcg cccttgcgcg
     4381 catcccagaa cagcttcggg ttgtagtgga agggcggatc gcgatacacg ccgaggatct
     4441 tccattcacc gatcggcagc gggtcatgct ggctgcccga ggacaccggc acctgcgcaa
     4501 tcaccttgcc ctgcgcatcc agcagctgca gcgtggaatc ggatttgtcg accaccactt
     4561 tggccgcctt cggcagcggg gcgggggcga tgttcggcac ctggatgcgg ttgccggcct
     4621 tgcccaggtc gacgccgggg ttcaatacct tcagcagttc gggcgaggca tggaagcgtt
     4681 cgcccagtga ttcctccacg ctgccataac ccaatgcctt cagcttggcc tgtgcggcag
     4741 gtcccttcgg caccggctgg aacggaccgg ccacgtcctc ggcggtcaac gtgtagctgg
     4801 ccagcggcgc attggcatcg gcctgcaggg ccttccaggt ggcttcgtcc agctcgccgg
     4861 tgacggtaag gccgtgcgcg gcctggaagc cagacaccgc gcggcgctgg ttgctgccga
     4921 cctcgccgtc aatctggccg ggcgagaaat tggcccggtc cagcagtacc tgcgcgtgca
     4981 gcggcgagcg ggccgcgatg tccggtcctg ccttctccgc gatgggctcc ggtagctggg
     5041 ccggcggcgg cacctgcgcg aaggcgggcg agatcagcaa ggacagggct aggagggcgg
     5101 ggcggggtac gggcatggag gactccggcg gatggcagct ctaccctgcc cggagaggct
     5161 gcgcagcccc cgtgaaagcg acctgatgcc ggcatgagca gggcagcccc ggcgtggcct
     5221 gggcccttgt cgcagaagcg ccgtgcgtgc catcaccaag gtgaacggct gccgacgccc
     5281 gtgcgtgttg ccgatcaaga atgccggcgg cgcggccgat acgggcgcat ccccccgttt
     5341 tggatgtacc gatgaactac ttgaggaatg tcagggttgc ctggcgtctt gggctgggct
     5401 ttggcctgtt gttgctgctg gtcgccgccg tggtggccac gggtgccacc gccagcgtcg
     5461 tgcagaagcg cgcgatgcag caggtggtcg atgtcagcgt ggccaaggtg cggttgctgt
     5521 cgcagatgct cgatgccaac aaccagatga tggtggtgcg ccgcgagatg ctgatccgcc
     5581 agggcgatga ccgtggccac gacgagcagc gcattgccga tctggtcaag cgctatgagg
     5641 ccagctggtc cgcctaccag gcgctaccca gcgatgccga cggcaaggcc attgctgaaa
     5701 ccatcgcagc caagcgcgcc ctcgctcgcc cgctcaacaa gcagaccagc gagttgatgg
     5761 agcagggtga ctatcccggc gcggtggcgc tgaccctggg cccggtgcag gaagcggcca
     5821 acggctggaa caaggcgctg tccgacggtg tggacttcga agagaaggaa agccgtgatg
     5881 cagccgccga ggcgatccgc ctgggcgagc gcagcctgct gcagctgctg gtgctgggcg
     5941 gcgttgcatt gctggttggc attgctgcct cggtgatgat cggccgcagc ctgaccggtc
     6001 cgctggcgcg cgcagtgaac ctggccgagc gcctggccaa gggcgagctg gatcaggaat
     6061 tccggcttgg cggtcgtgac gaattgaccc agctgggcca ggcgatggcc agtgtgcggc
     6121 agagcgtgca ggccgcgatc ggcgcacagc tgcagatggc cgagcagcat gaggcgggcg
     6181 cgatccgcta tcgcatggat gccagcgcgt tcccgggtga tttcggccgc atggtgcagg
     6241 ccaccaacag cctggtcgaa tcgcacgtgc aggtggaact gctgatggcc gaggtgatgc
     6301 agcgctacgc catcggtgac ctcagccgtg acctgccgga ctacccgggc gagaagggcg
     6361 cgctgacccg caccctgtcc gccgtgaagc agagcctgat ggcgatcaac gcgcagatcg
     6421 atgaactggc ccgcgccgcg cgcgccggcg acttcagcat gcgcggcgat gccgccgcat
     6481 tccagtacca gttcaaggcg atggtcgagc atctcaacgg catgatggcc agctcgcagg
     6541 ccagcatcgc cgatgtctcc gacgtgctgc gcgcgatctc gcatggcgac ctgaccgcac
     6601 gcatggacgg cgagtacgac ggcgtattcg cgcgcatgcg cgacgacgcc aacaccacca
     6661 ccgcgcagct gaccggcatt gtgcgtggca tccaggtggc ggccgacagc atcaacaacg
     6721 cggcacagga actggccgcc ggcaacaacg acctgtcgcg ccgcaccgag cagcaggcgg
     6781 ccaacctgga agaggccgct gcatcgatgg aggaactgac ttccaccgtg cgccagaatg
     6841 ccgagctggc ccgccaggcc gacagcgaag cacacgccgc cggtgccgcg gtgcgcgaga
     6901 ccgaacaggc gatggcacag atggcttcgg tgatgggcga gatcgaccag tcgtcggccc
     6961 gcatctcgga aatctccacg gtgatcgatg gcatcgcctt ccagaccaac atcctcgcgt
     7021 tgaacgcggc ggtggaagcc gcacgtgcag gcgagcaggg acgcggtttt gccgtggtcg
     7081 ccagcgaagt gcgcacgctc gcacagcgcg ccggtgtcgc cgccaaggag atcaaggaac
     7141 tgatcgaaga tgctgccgcc aaggtgaaga gtggcctggc agtgaccgtt gaatcggaag
     7201 ctgcgatcgc acgcgtggcc caggccagtt cgcgaaccac ccagctgatg agcgacattg
     7261 ccgcggccag caaggaacag gcggccggca tcgagcaggt caaccaggtg gtggtgcaga
     7321 tggaccaggt gacccagcag aacgctgcgc tggtggagga agccaccgcc gccagccgcg
     7381 cgctggaaga acaggcgcat gcgctgacta cgtcggtgtc ggtgttcaag gtggaaggcg
     7441 cagcagtttc cgccgtgccg cgccgcgccg cctgagcacg tcacttccgt tgaaattgtg
     7501 cggccgcagg gcacggcggc cgcgttccag tggaaggatc gcgatcagcc actggcgcgg
     7561 gtgcgcgccg ccttcttcgc cgccgctttg cgcacactct tcttcgcggc acgggtcttg
     7621 gctgccttct tcgcggcggc actgcgtgaa gcggcggtgc tggccttctt tgccgctgcc
     7681 ttgcgagcgg gagccttctt tgcggcggtc ttcttcgttg tggccttgcc ggcagtcgtc
     7741 ttcctggctg cggtcttctt cgcaggcgct ttcttagccg cggtcttgcg tgcagccgtc
     7801 ttcctggctg ccgacgtcgt ggccgatttc tttgcgggtg ccttgctggc agtgttcccg
     7861 gcactcttgc gcccactgcc gctgcgcttg ccacccccat cctgcttgtt caccgtggcc
     7921 caggcgatgc gctcggccgt gccttcgctg gcaccgcgct ggcgttcgct ctcttcgatg
     7981 tgctcggcct ggcgcttctg cttctcggta taggcggact tgtcaccacg gggcatggca
     8041 gggtctccgg tgggggctgg cccccacggt gcccctggcg gcgttaagcg caagtcccgc
     8101 aagggtgatc gcaccggcaa ggccgcctcg gctatgcttg ccgcatgcga gtcgagcccg
     8161 ccgacatcga agccctgttc gacgccattc cggacgtgct gttcttcatc aaggaccgcc
     8221 aggggcgtta cacccacgtc aaccagacca tgctgcggcg gctgggcctg cgcgcgcgca
     8281 aggatgtgat cgggcgtacc gcggccgaga tctacccgac cgggctcagt gcggactatg
     8341 tcgaccagga cgcccgcgtg ctgtccggcg aggtgatcga gaacctgatg gagctgcacc
     8401 tgtttgccaa ccgcgaaccg ggctggtgcc tgacctgcaa gcgcccgctg ctggtcgatg
     8461 gggccatcga gggcctgatc ggcatttccc gcgacctcgg ccagaaggac agcctcggca
     8521 cccagtacga gcagctgcgg ctggccctgg cccacctcaa tgcgcattac gccgagaacg
     8581 tgcgcatgca gaccctgctg gacatcaccg gcttctcgct gtccaagctg gagcgcagct
     8641 tccgcaaggt gttccagatg accccgcagc aggtgctgac ccggctgcgg atccagatgg
     8701 cgatgcacct gctgcatggc gacgacagca tcgcctgcat cggccaggcc tgcggtttca
     8761 gcgaccagag tgcgttcacc cgcaagttca aggctgaaac cggtttctca ccgcgtgcct
     8821 atcgggcccg aatcggtggg aacgtcggcg agccggccct ggcctgagac gcctgctgcg
     8881 ctgtgcctat ccccacgggc atgggacagg gtaaggtgtc gcccctgtag cccgccgcca
     8941 gccccgccga tgcccaattc gattccgacc gcttcgccgt cccgcctcgg acattcgctc
     9001 aagccccgcc agctgatcat gatgggcctg ggcagcgcca tcggtgcggg attgttcctc
     9061 ggttcgggcg tgggtgtgca ggcggccggt ccggcggtgc tggtgtccta cctggtggcc
     9121 ggcgcgctgg tgatcatcgt gatgaacgcg ctgggcgaga tggcggcggc caagccgacc
     9181 agcggtgcgt tctcggtgta cgccgccgac gccatgggcg ccacggccgg tgccaccgtc
     9241 ggctggctgt ggtgggtgca gctggtgatc gtgatcgccg ccgaggcggt aggtgcggcc
     9301 ggcctgctgg ccacggtctg gccatcaata ccggtaccga tggcggcgct ggcgttcatg
     9361 ctgttcttca ccgcgatcaa cctgctcggg gtgaagaact tcggcgaatt cgagttctgg
     9421 ttcgcgatcc tcaaggtggt ggcgatcctg gcgttcatcg ccattggtgt ggcgctgctg
     9481 atgggctggc tgccgcaggt gacctcgccg ggcctgagca acttcaccga gcatggcggc
     9541 ttcgcaccga agggcctggc tggtatcggt gcggcgctgc tggtggtggt gttcgccttc
     9601 ggcggcaccg agatcgtggc cgttgcggcc gctgagaccg aagaccccga gcgcagcatc
     9661 gcgcgtgcca ttcgcaccgt ggcctggcgc atcctggtgt tctacatcgg ctcgctgagc
     9721 gtgatcatcg ccgtggtgcc gtggaccagc gaagcgctga aatcgccgtt cgccgcggtg
     9781 ctggatatcg cccgtatccc gggtgcgggc accgccatca ccctgatcgc ggtgatcgcg
     9841 ctgctgtcgg cgctcaatgc caacctctac ggtgcctcgc gcatgatgta ttcgctggcg
     9901 cagcgccgcg aagccccggc cgtgctcggc tggaccgatc cgcgccaggt gccggtggtc
     9961 gccgtgctgg ccagcgtgct gttcggtttc gccgccacgg tgatggaact gctgttcccg
    10021 gaccgggtgc tgccggtgct gctgaacatc gtcggttcca cctgtctgct ggtgtggacg
    10081 ctgtcgctgg tctcgcagct ggtgctgcgc cgccgcgcgg atcgcctggg cacgcgcctg
    10141 ccgttccgca tggccggctt cccgtggctg acctgctgcg cgctggcgat cctggcgctg
    10201 atcttcggcc tgctgctgag cgaatcgcat acccgcctgc agttcctgtc gatggtggca
    10261 ctgaccgcca ccatcgccgc tggcagcgcc attgcgcggc ggatgcgcga ggcgtgatga
    10321 agctgccggc cagcggccgg cactaccacg ggggctgcac atccggcgtg cgatgctgat
    10381 cgtgtgggtc gtcaccggcc cgtcgaacag gagttccgca tgctgcgcag ccgtccgttc
    10441 ctgatgttca ccggccaggc cgaagccgcc ctggccctgt atgccgaggc ctttgccgat
    10501 ttccggctgc tggcgctgca acgccacccg gaggggcccg gtgccggcgt gcctggccag
    10561 gtccgccagg ccatcttcct gctcggcggc acccattacc tgtgcttcga cagcctcgat
    10621 gtgcacggct tcaccttcac cccgtccatc tcgctgttcg tggagtgctc gggcgccgag
    10681 cagttcgagc gcgcggcgcg cgtgctgggc gagggcggcc attggctgat gccggtgggt
    10741 gactacgatt tcagcaaccg ctatggctgg gtgcaggacc gcttcggcgt gtcatggcag
    10801 ttgagcctgg ggcagatgcc ggacccgtga tcggatcttt gtgggtgtgg acctaggtcc
    10861 acacgccctt atgaaaacgg cccgcttgcg cgggccgttt tctttaccga tgcagtgagg
    10921 aatcaagcct cgacttcatc gtccttgtag gcatcgaccg ggatgcaggc acacatcacg
    10981 ttcttgtcgc cgtacacgtt gtcgacgcgc gctaccggcg gccagtactt gctctgcttc
    11041 aggctggcca gcgggaaggc ggccagttcg cgcgggtagg cgtgggtcca ctcgctggcg
    11101 gtcactgcgg tggccgtgtg cggtgcgttc ttcagcgggt tgtcctcgcg gtccaggcgg
    11161 ccgtcttcga tcgcgctgat ttcctcgcgg atctggatca tcgcgttgat gaagcgatcc
    11221 agttcgtgca gcgattcgct ctcggtcggt tcgaccatca gcgtgccggc caccgggaag
    11281 ctcagggtcg gggcgtggaa gccgaagtcg atcaggcgct tggccacgtc ctcggcaccg
    11341 atgccgctgg tcttttccag cgggcgcacg tcgaggatgc actcgtgcgc caccaggccg
    11401 ttgcggccgg tgtacagggt cttgaagtgc ggggccaggc gcttggcgat gtagttggcg
    11461 ttgagctgcg cgacctgggt ggccttgcgc aggccttcgc tgcccatcat ggcgatgtac
    11521 atccagctga tcggcaggat cgaggcgctg ccgaagctgg ccgcgctgac catgccgacc
    11581 gggccgtggt cacccagctt gcccggcagg aacggggcca ggtgctcctt gaccgcgcac
    11641 gggccgacgc ccgggccgcc accgccgtgt gggatgcaga aggtcttgtg caggttcagg
    11701 tgcgaaacgt ccgaacccca cttgcccggc ttggccacgc cgaccagggc gttcatgttg
    11761 gcaccgtcgg tgtacacctg gccgccgtgc ttgtggatga tctcgcagat ctccaccacc
    11821 tcttcctcga acacgccgtg cgtggacggg taggtcatca tgatcgcggc caggcggtcg
    11881 ctgtacttct cggcgttgag gcggatgtct tcgacatcga cgttgccgtt ggcgtcggtc
    11941 ttggtcacca ccaccttcat gccgcacatc tgcgccgagg cagggttggt gccatgcgcc
    12001 gagtccggaa tcaggcagat atcgcgatga ccttcgccgc gcgagcggtg gtaggcgcgg
    12061 atcgccagca ggccggcgta ttcgccctgc gcgccggagt tcggctgcag gctgaccgcg
    12121 tcgtagccgg tgcactccac cagcatcgct tccagcgtat cgatcagttc cttgtagccc
    12181 agcgcctggt cggccggcac cagcggatgg atctgcgaga actccggcca ggtcaccgga
    12241 atcatctcgg cggtggcgtt gagcttcatg gtgcacgagc ccagcgggat catcgtgcga
    12301 tccatcgcca ggtccttgtc ggccagcgaa cgcaggtagc gcagcagctc gtgctcgctg
    12361 tgatgggtgt tgaacaccgg gtgggtgagg aacgcggact ggcgctgcag gccggcaggc
    12421 agcgcatcgg cggtgctggc atccagtgcg tcgacgtcgg cctgcgcacc gaacaccgca
    12481 gccagcgcca ccacatcggc gcgggtagcg gtttcgtcca ggctgatgcc gaccgagtcg
    12541 ctgtcgatcg cgcgcaggtt gtaaccggcg gcgcgggcct tggcgtggat ctcatcggcg
    12601 tgcacgccgg tgacatgcag ggtgtcgaag aagtcgccac cgacctgcac gccggccgtg
    12661 cgcagcgccg cggccaggat cgaggccagg cggtgggtgc ggcgggcgat gcgggtcagg
    12721 ccgtccgggc cgtggtagac ggcgtacatc gacgccatca ccgccagcag cacctgcgcg
    12781 gtgcagatgt tggaggtggc cttctcgcgg cggatgtgct gctcgcgggt ctgcagggtc
    12841 aggcgatagg ccgggttgcc ctgcgcatcg accgagacgc cgatcaggcg gcccggcatc
    12901 gaacgcttgt aggcatcgcg gcaggccatg aaggcagcgt gcgggccacc gaagccgaac
    12961 ggcacgccga aacgctggct gttgccgacc acgatatccg caccccattc gcccggggcg
    13021 gccagcaggg tcagcgccag caggtcggtg gccacggcga ccaggccgcc gcgtgcgtgc
    13081 acggcatcga ccagcgcctt gtagtcgccg acctggccga aggtgtccgg gtactgcagc
    13141 agcaggccga aggcttccgc ttccagtgcc tcggccgggg tgccgacgcg cagcacgatg
    13201 cccatgggct cggcgcgggt gcgcagcagt tccagcgtct gcgggtgcac ggcgtcgtgc
    13261 acgaagaagg tgtccgactt cgacttggcc gaacgcttgg ccagggtcat cgcttcagcg
    13321 gcggcggtgg cttcgtccag cagcgaggcg ttggcgattt ccatgccggt caggtcggcg
    13381 cacagggtct ggaagttgat cagcgcttcc atgcggccct gcgagatttc cgcctggtac
    13441 ggggtgtagg cggtgtacca ggccgggttt tccaggatgt tgcgcaggat cacgttcggc
    13501 gtgtgggtac cgtagtagcc ctggccgatg aagctgcgca gcacggtgtt cttgtcggcg
    13561 atcgcacgga tcttcgccag tgcctgcact tcggtcatcg attcgggcag tgccagcggt
    13621 gcgggcgact tgatcttggc cggcacgatg gcatcggtca tcgcatccag cgacgcgtgg
    13681 ccgacgacgt cgagcatctg cgcgatctcg gcatcgttgg ggccgatgtg gcgctcgacg
    13741 aacgcggaat ggtgctcgag ctcacgcagg gaaggggtgt tctgggacat ggcgaaggat
    13801 ccgtcaggaa agggcacacg cacgggcaca agccgccggt cggcggtctg cggggcgccc
    13861 ctctgtcctt ttgcctgaga gtttggaagt gcggctggcc gcagcttcgt gccccttcgg
    13921 cgccggatcg aaccggtctc tccagagttg tgttacgggt ggtatcgggc ctgagcgatt
    13981 acgggcgttg cgccttcggc agcggtgttc cgcttctccc accgtgttgc ctgctgatta
    14041 tagcccgtcg cgggcccgtg ggccgccccc ggcgggtgcg gccgcgcctg aatggccgat
    14101 ggcccgtccg tgcgttttgt gcactgctgc atggcatcgg gcgcaatccc cacctatgat
    14161 gagcggatac ccgaattcat ctggcgccgt ccctgctgca gggggaccgg cgcccgccgt
    14221 gcgtgccacg catggccctg ccggacgcct tccccatgac cgccgctgtt gctccttcca
    14281 cccgccgcat ggccctgctg ctcgccggcc tggccatgtt cggtccgttc tcgatcgaca
    14341 ccatcttccc ggccttcccg cagctggccc agcgcctggc ggtggacgag gtggcggtgc
    14401 agcagaccat cagcgtgtac ctgctgttct acggcctgat gagcctggcg cacggcccgc
    14461 tgtccgatgc ctggggccgc aagcgggtga tcctcggcgg cctggtggtg tttgtcggcg
    14521 cctcggtcgg ctgcgcgctg tccaccgacc tgaccacgct gctggcgttc cgcgcgctgc
    14581 agggcctgtc ggcgggtgtc ggcatgatcg tcggccgcgc ggtgatccgc gatctctacc
    14641 acgggcatga cgcgcagcgg ctgatgagcc aggtgtcgat gctgttcggc atcgccccgg
    14701 cgatcgcgcc gatcatcggc ggctggatcc tgctcagtgg cgcgggttgg ccgctgatct
    14761 tctggttcct ggtggtgttc gcactggtgc tgctggcggc caccgcacgc ttcctgccgg
    14821 aaacgcatcc ggtcgaggcg cgggtgccgc tgtcgccgcg ggtgctgatg cgcgactacg
    14881 tgcgcatcgg cttcaatcca cgtttcctgc gcctggcgct ggccggcagc atcggcttcg
    14941 gcggcatctt cctgtacatc tcctcggcgc cggtgttcgt gatgcagcat ctgcatctgg
    15001 gcgagggcgg attcgcctgg ctgttcattc cgaccatcgg cggcatgacc accggctcgt
    15061 tcctgtccgg gcgcatggcc gggcacacca cgcccacccg ccaggtcgcc atcggtttcg
    15121 cgctttgcgc attgtcggca ctgctgaacg tcggctacgt ggcactggcg ccgcagttcg
    15181 tgctgccgtg ggcggtgctg ccgattttcc tgggtggcat gggcatggcg ctgatcttcc
    15241 cgatcctggc gctggcggtg ctggacatgt acccgcatca gcgaggcctg gcgtcttcgc
    15301 tgcaggcctt tgcgcagctg atgatcagca ccgtggtggc gggcgtggta tcgccgctgc
    15361 tcagtgccag cccgttgcac ctggcactgg gccaggccgc cttttttgcc ctcggtttcg
    15421 tgttctggta ctgggaacac cagcgtgaac gcgtggcgca ggcagcctgc acgggccatt
    15481 gagcagcgcg caggggtagg gcggggcgcg atgcctgcaa cccttgcgac ggaacaccac
    15541 cggattaggc tggggactcc agccagccgg tgcaggggtg cacgacagcc agccgatcca
    15601 atgtcgttgc atgaggttcc cccatggctg cgcagcagac ctaccgcctg ttcgaggtgg
    15661 cgctgaaaga gcgccgcgtg ctttcccctt cgctggaccg catggtgttc accggtgccg
    15721 acgtggcacg gatgaagacc gaaggcccgg accagcggat caaggtgttc ttccccttgc
    15781 ccggccagga ccttccgcag gtccccagcg gcgaggactg gtacccgcgc taccgggccc
    15841 tgcctgacga ccagcgccct ccgatgcgca cctacaccat ccgccagctg cgcgctgagc
    15901 agggcgaggt cgacgtcgat ttcgtcatcc acggcgtgac cgggcccgcc tcgcgctggg
    15961 ccatgcatgc acgcccgggc gaccgtgtgg tgctgctcgc tccggatgcc gactgcgccg
    16021 acagcagcga aggctgggaa tggaagccgc cggccggtgt ggggcaggtg ctgctggtgg
    16081 ccgacgagac cgcgttgccg gccgtggccg ggatcctgga ggaactggcc gcgctggcgg
    16141 acccgccacg cacgctggcc ctgctggaag tcgcccaggc cggtgatgcg gtgccgttga
    16201 ccgcgccggc cagcgccgaa ctggtctggc tgccgcgcgg gcaggcggcc tacggccagc
    16261 ccctgctgca ggcggtgcag gaacgcctgg cagcggcctc gagcgtggcc gccggcgatg
    16321 agctggagga gatcgacgtc gatgcgcaga tcctttggga gcaggccgat gccagcgtgg
    16381 ccgggccgct gtacgcatgg gtggcgggcg aggccggggc cgtgatggcg atccgccggc
    16441 atctggtccg cgactgcggg ctggaccgcc gcgcgatcac cttcatgggc tactggcggc
    16501 acggcaaagt gctggactga gggggtgtga aacggcccgg cgggcggggt gcgctatcct
    16561 tgcgcccccc tcgccgcggt accgcaccat gtccaccagc tccaagaccc gccgcgacca
    16621 gcgccgtcgc caggaaaagc aggccgccaa caaggttgca gcccaggcct cgccggtgga
    16681 gccgcatgcc gaactgcgcg acgcgcagcg caccctgctg gccggggtcg tgcgccgtga
    16741 cggcgaatgg gtgctgggca tggacggccg catcgctggc cacagcgaga gtgctgcgca
    16801 ggtgctggcg ctgatcatgc aggccggtga actgcacgag cgcaacggca cgccggtgcg
    16861 cctgatgtac tccgatgcgc tgcgcgatgc cgcgcaggcc gaagcgaagg agaagggtca
    16921 gaccttcgag gaattcaagg ccgagctggc cgcggcgatg gcggcgaaga agaacagctg
    16981 acaggcattt cggtagcgcc ggccgctggc cggctgcccg ttgggtcttc atcgcg
//
LOCUS       DAOKIP010000074        16924 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.074,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000074 DAOKIP010000000
VERSION     DAOKIP010000074.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 16924)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16924)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16924
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.074"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(1..59)
                     /locus_tag="QEL58_002045"
     tRNA            complement(1..59)
                     /locus_tag="QEL58_002045"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(31..33),aa:Met,seq:cat)
     gene            complement(150..226)
                     /locus_tag="QEL58_002046"
     tRNA            complement(150..226)
                     /locus_tag="QEL58_002046"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(190..192),aa:Met,seq:cat)
     gene            complement(354..1814)
                     /gene="nuoN"
                     /locus_tag="QEL58_002047"
     CDS             complement(354..1814)
                     /gene="nuoN"
                     /locus_tag="QEL58_002047"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003485567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoN"
                     /protein_id="HDS1676523.1"
                     /translation="MTTSPLLPLTAADLPPLAPELVLIGSAFALMILDLFVSNRNKIV
                     THLFSLAALAVVLFMLATGVGGQGEVFHGMFVRDTAADVMKTGIVLLSGLTLVYGWRY
                     LRDRNLFQGEIPVLILFGTAGMMILVSAGSLLMVYLGLELLALCSYALVASNRENGLA
                     SEAAMKYIVLGSLASGLLLYGMSLIYGATGSLHLDVIRDAIPHSEERVLLITGAVFMI
                     AGVAFKLGAAPFHMWLPDVYQGAPAPIALFISSAPKLAAFGMAYRLLEMGVGPLSTEL
                     QLLIAGLAAVSLVIGNLMAIAQSNLKRMLAFSTVSHIGFLLMGIAGGGAQGYAAALFY
                     ALAYAIMSTAAFGAIIALSRAGFEAENIEDFKGLNARNPWMAGLVLCIMASLAGIPPF
                     LGFWTKLAVLGAAVNGGLLWLAILGVLCAVVGCFYYLRVIKVMYFDEPVGEAMPRSND
                     RVLGLVLGVNALALLALGIAWNPIMVWCQQAFAHLA"
     gene            complement(1830..3338)
                     /locus_tag="QEL58_002048"
     CDS             complement(1830..3338)
                     /locus_tag="QEL58_002048"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit M"
                     /protein_id="HDS1676524.1"
                     /translation="MSNWPLLSVLIWLPILGGALILAIRDAQTARWASLGVAVLTFVA
                     SLSLLSGYNAGIDGLQFVETHAWIPAYKIGYNLGVDGIAVALILLTTLVSVLALIGAW
                     SAIDKRVNQYVAAFLILEGVTVGIFSATDAMLFYVFFEAMLIPMFLIIGVWGGPRRIY
                     AALKFFLYTFLGSVLMLVALIYLYLKGGSFQLADLYALPLSAKEQTWIFFAFLIAFAV
                     KVPMFPVHTWLPDAHVEAPTAGSVILAAIALKIGGYGFLRFNLPIVPDASQEWAWLVI
                     ALSLIAVIYVGLVALVQDDMKKLIAYSSIAHMGFVTLGTFIALWLVREAGNADAARLG
                     LQGAMVQMISHGFVSGAMFSCVGVLYDRMHSRRIADYGGVVNVMPWFATFAMLFFMAN
                     AGLPGTSGFVGEFMVILSAFQRNPWIALGAATTLIIGAAYTLWLYKRIFFGEVANSHV
                     AELKDINGREWLVLGVFAIGVLALGIYPKPLTDLMEPSIAKLAMQIASSKLL"
     gene            complement(3362..5536)
                     /gene="nuoL"
                     /locus_tag="QEL58_002049"
     CDS             complement(3362..5536)
                     /gene="nuoL"
                     /locus_tag="QEL58_002049"
                     /EC_number="7.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit L"
                     /protein_id="HDS1676525.1"
                     /translation="MEITLSKSLLIAVVLAPLFGSIIAGLFGRQVKRFGAQTITILGV
                     AVACGLSMYTLYQLLWGGAQPFNQNIYTFFEVGQYSAHVGFMVDKLTAMMMVVVTFVS
                     LLVHIYTIGYMQDDPGYQRFFSYISLFTFSMLTLVMSNNFLQLFFGWEAVGLVSYLLI
                     GFWFKRPTAIFANMKAFLVNRVGDFGFLLGIAGVLWVFGTLDYSQVFSQAGMLADPRA
                     QLQIWDGTILGMQLLNEPVIWSIATVICICLFIGAMGKSAQVPLHVWLPDSMEGPTPI
                     SALIHAATMVTAGIFMVTRMSPLFELSQTALNFILFIGATTAFFTGLIGIVQNDIKRV
                     VAYSTLSQLGYMTVALGVSAYSAAVFHLMTHAFFKALLFLGAGSVIIAMHHEQDMRKM
                     GGLRKYMPITFVTMWIGTLALVGTPFFSGFYSKDTIIEAAEIHAHMQNSWVATYGYWA
                     VLGGVLVTSFYSFRLLFMTFHGKERFRDAHDDHGHGHDDHHAADAHHADAHHGDAHDD
                     HGHGHGPHEPHETPWVVTLPLILLAIPSIAIGFFSIGPMLHGTDWAGHHAHAAIQGQV
                     NTFFTGIVNFYDPAKNTVAFLGEEFHGPVAFALHGMMLPPFWLTLAGFLLAALFYLWK
                     PDLSGKARKTFAPLVSVLENKYGFDKLWIDGFAGGSVKLGKVARWIDSNIVDGVVNLS
                     ARVVDVAAGVLRRTQSGFLYHYAFAMIIGLIALLGVLMHYLR"
     gene            complement(5544..5849)
                     /gene="nuoK"
                     /locus_tag="QEL58_002050"
     CDS             complement(5544..5849)
                     /gene="nuoK"
                     /locus_tag="QEL58_002050"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006450557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoK"
                     /protein_id="HDS1676526.1"
                     /translation="MITLGHMLALGAVLFAISLAGIFLNRKNVIVLLMSIELMLLSVN
                     INFVGFSRQLGDPSGQLFVFFILTVAAAEAAIGLAILVTLFRTRRTINVGEVDSLKG"
     gene            complement(5846..6502)
                     /locus_tag="QEL58_002051"
     CDS             complement(5846..6502)
                     /locus_tag="QEL58_002051"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014647864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit J"
                     /protein_id="HDS1676527.1"
                     /translation="MDWVNIAFWVFAIAATVSAGAVISVRNPVHAVLCLVLTFFSIAC
                     VWLLVGAEFLGVALVLVYVGAVMVLFLFVVMMLDIDPTKLREGWVRYLPVGLIVAVAM
                     LVQMLILIGVKARSVTPFPADNAAAVAADSSNVTWLARTLFTEYLLPFEFAAVILTVA
                     VVAAVMLTLRRRTGVKSQNPGEQTMVKAGQRLRMVKMGAEAPVVHSNSKPAAGEETQP
                     "
     gene            complement(6512..7000)
                     /gene="nuoI"
                     /locus_tag="QEL58_002052"
     CDS             complement(6512..7000)
                     /gene="nuoI"
                     /locus_tag="QEL58_002052"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005927506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoI"
                     /protein_id="HDS1676528.1"
                     /translation="MNRITHYFKSLLLLELLAGLWLTLKYSFKPKYTMMYPMEKFPQS
                     PRFRGLHALRRYPNGEERCIACKLCEAVCPALAITIDSAKREDGTRRTTRYDIDLFKC
                     IFCGFCEESCPVDSIVETHILEYHFENRGENIVTKPQLLALGDRLESEIAERRAADAA
                     YR"
     gene            complement(7005..8099)
                     /gene="nuoH"
                     /locus_tag="QEL58_002053"
     CDS             complement(7005..8099)
                     /gene="nuoH"
                     /locus_tag="QEL58_002053"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010375869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoH"
                     /protein_id="HDS1676529.1"
                     /translation="MNELLLNAVDPLHQWLLGLGDIGALIWIILKILVITVPVIISVA
                     FYVVWERKLIGWMHVRHGPMYVGMGIFQAFADVFKLLFKEVVQPSSANKAIYLLAPLI
                     TLAPAFAAWSVVPFDSQIVLSNANAGLLYLLAMTSLGIYGIILAGWASNSKYAFLGAM
                     RASAQMISYEIAMGFALVGVMIASGSLNLSNIVMAQAGSSGFFDWFLLPLFPLFVIYW
                     VSGVAETNRAPFDVVEGESEIVAGHMVEYSGGAFALFFLAEYANMILISFLISIFFLG
                     GWLSPVQGWVNFGDVSPLVDWIWKGGAPWLFVKVFFFASAYIWFRASFPRFRYDQIMR
                     LGWKVFIPLAILWIAVTAVMVFFGVIQKGV"
     gene            complement(8096..10330)
                     /locus_tag="QEL58_002054"
     CDS             complement(8096..10330)
                     /locus_tag="QEL58_002054"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011347938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit G"
                     /protein_id="HDS1676530.1"
                     /translation="MSAQPVNPSVPPDHVTIEIDGKSLVVPKGSMIIQAADKAGISIP
                     RFCYHEKLPIAANCRMCLVDVEKSPKPAPACATPVMDGMKVATRSEKALKFQRSVMEF
                     LLINHPLDCPICDQGGECELQDVSLGYGRSVSRFNERKRVVPDEDMGPLVATEMTRCI
                     QCTRCVRFTADVAGTYELGGMYRGENLQIGTYDGKPLTTELSGNVVDVCPVGALTNKV
                     FQFRARPWELTARESLGYHDAMGSNLFLHVRRGEVLRTVPRDNEAVNECWLSDRDRYS
                     HQGLYSEDRAVKPLRKVNGEWKEVSWAEGLAAAAEILKANQGDNLGVLVHPSTSNEEG
                     ALLARLAKGLGSSNIDHRINNRDFSDAATAEVFGLPLAEIEGADRIVVLGSNIRHELP
                     LLHARLRKAQTTNGAKIHVVNPVDFDFAFSIAGKQIVAPSKFVDALANAELRSAVQGG
                     NNTVLIVGGIAENHPQAAAIRAAARDFAAATGAKLCRIPQGANAVGLTRAGVLPAGKD
                     VAAMLAQPRQAYVVYGLEPGLDFADAPAARKALVGAKVVAFSQFACVSTRDVADVILP
                     IGALPEIDATLTNLDGREQSARAGGKLPGEAREGWRVLRALGGEMALAGFDFTDLAGL
                     RASLAPVSVSVAASAQLAVTGEGLEVASTAAIYRTDAVVRRAPALQSHPLNNAPRIVL
                     NAEDAARLQLQEGQMAKVGTDAGKATLPVVVDARVAAGSVWIESGHGATAPLGAARVT
                     VVAA"
     gene            complement(10327..11667)
                     /gene="nuoF"
                     /locus_tag="QEL58_002055"
     CDS             complement(10327..11667)
                     /gene="nuoF"
                     /locus_tag="QEL58_002055"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoF"
                     /protein_id="HDS1676531.1"
                     /translation="MAHHHESKGPVGPAPLPHQVVYTTLHYDTPWSYESYLKTGGYAA
                     LRKILEEKIPPEQVIEMVKASGLRGRGGAGFPTGLKWSFMPKGNMQKYILCNSDESEP
                     GTCKDRDILRYNPHSVVEGMAIACYATGSTVGYNYLRGEFHHEPFEHFEQALADAYAN
                     GWLGKNVMGSGVDIDIYGALGAGAYICGEETALMESLEGKKGQPRYKPPFPANFGLYG
                     KPSTINNTETYGSVPAIIRNGPEWFKGLSLTANGGPKCFSVSGCVQNGGNFEVPLGTT
                     FDDLLEMAGGLRPGRTLKGAIPGGVSMPVLTAAELKGLPMDYDTIRALGSGLGSGAVV
                     VLDDSVCCVKFACRISQFFHKESCGQCTPCREGTGWMHRVLERIVAGKATMEDLHQLK
                     AVAGQIEGHTICAFGEAAAWPIQGFLRQFWDEFEYYIVNGHSMVDGKKVEAAAA"
     gene            complement(11672..12199)
                     /gene="nuoE"
                     /locus_tag="QEL58_002056"
     CDS             complement(11672..12199)
                     /gene="nuoE"
                     /locus_tag="QEL58_002056"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoE"
                     /protein_id="HDS1676532.1"
                     /translation="MKATGNFEAARDVDPMVVLSDKTRAHIDHWLSKFPPDRKRSAVL
                     QGLHAAQEQNEGWLTDELIAGVAKYLDLPPVWAYEVASFYSMFETEKVGRNNVAICTN
                     ISCWLNGAEDIVRHCEKKLGIKHGESTPDGRVYLKREEECLAGCGGAPMMVINGHYHE
                     RLTLEKVDELLDGLE"
     gene            complement(12297..13604)
                     /locus_tag="QEL58_002057"
     CDS             complement(12297..13604)
                     /locus_tag="QEL58_002057"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002810223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit D"
                     /protein_id="HDS1676533.1"
                     /translation="MSHVHQAGEAFASNAAESRQEIRNYTMNFGPQHPAAHGVLRLIL
                     EMDGETIMRADPHVGLLHRGTEKLAESKPFNQSIGYMDRLDYVSMMCNEHAYVRAIET
                     LMGIEAPERAQYIRTMYDEITRILNHLMWLGSNALDLGAMAVMLYAFREREELMDCYE
                     AVSGARMHAAYYRPGGVYRDLPDHMPKYKESRWHKGKALKQLNASREGSLLDFLENFT
                     NEFPGRVDEYETLLTDNRIWKQRTVGIGVVTPELAHQWGMTGVMLRGSGIAWDLRKKR
                     PYAKYDAVDFDIPLGKEGDCYDRYLVRVAEMRESNRIIKQCVAWLKANPGPVMVKNFK
                     VAPPKREDMKDDMEALIHHFKLFSEGYCVPAGETYAAVEAPKGEFGCYLVSDGANKPF
                     RVHLRAPGFAHLSSIDSVVRGHMLADVVAMIGTYDLVFGEVDR"
     gene            complement(13601..14350)
                     /locus_tag="QEL58_002058"
     CDS             complement(13601..14350)
                     /locus_tag="QEL58_002058"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010486428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit C"
                     /protein_id="HDS1676534.1"
                     /translation="MAEQASFIDRLSARFAGAKVIVVEPRGEVTLEVPAAEWHATALA
                     LRDEFGFEQAVDLCGVDYLGYGSDEWDTADVSSQGFSRGVEGKAQGRFAWGEFPTEEN
                     GADGARPQHMPTQRFAVVAQLRSYQHNLMMHLRCFAPDEALPVVSSLTGIWPGLNWFE
                     REAFDLYGVIFEGHPDLRRILTDYGFVGHPFRKDFPLIGNVEVRYDEEKKRVIYEPVT
                     SVEPRVGVPRVIRDDARLQTAEGERAQEAVK"
     gene            complement(14384..14938)
                     /locus_tag="QEL58_002059"
     CDS             complement(14384..14938)
                     /locus_tag="QEL58_002059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005914280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit B"
                     /protein_id="HDS1676535.1"
                     /translation="MGVIQTLDGLMNNPTPEGRVDDILRPEGDNPLLEKGFVTTSVDA
                     LLNWARTGSMWPMTFGLACCAVEMMHAGAARLDLDRYGVVFRPSPRQSDVMIVAGTLV
                     NKMAPALRKVYDQMPDPKWVISMGSCANGGGYYHYSYSVVRGCDRVVPVDVYVPGCPP
                     TAEALVYGILQLQKKIWRTQTIAR"
     gene            complement(14929..15285)
                     /locus_tag="QEL58_002060"
     CDS             complement(14929..15285)
                     /locus_tag="QEL58_002060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003467430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit A"
                     /protein_id="HDS1676536.1"
                     /translation="MLAEYLPSLLFLIVATGIGITLMLVGRFLGPRRPDLEKLSPYEC
                     GFEAFEDARMKFDVRYYLIAIQFIVFDLEIIFIVPWTQVFMELGARSLITMGLFVGML
                     FLGFIYVWKKGALEWE"
     gene            complement(15397..15481)
                     /locus_tag="QEL58_002061"
     tRNA            complement(15397..15481)
                     /locus_tag="QEL58_002061"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(15445..15447),aa:Leu,seq:gag)
     gene            complement(15533..15970)
                     /gene="secG"
                     /locus_tag="QEL58_002062"
     CDS             complement(15533..15970)
                     /gene="secG"
                     /locus_tag="QEL58_002062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010486424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecG"
                     /protein_id="HDS1676537.1"
                     /translation="MLMLILNVVYVLVAVAMIALILMQRGSGAAAGSGFGAGASGTVF
                     GARGASNFLSKSTKWLAVVFFGISLFMAWYAGHGTRPAADQDLGLMSAPAASAPAAPA
                     GELPAVPKADAVPAAPVPAANVPAKAESSNSGEEKPSEGSQKD"
     gene            complement(16002..16757)
                     /locus_tag="QEL58_002063"
     CDS             complement(16002..16757)
                     /locus_tag="QEL58_002063"
                     /EC_number="5.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="triose-phosphate isomerase"
                     /protein_id="HDS1676538.1"
                     /translation="MRRKIVAGNWKLHGSRQFANELLGQVATGLPLEGVDVVILPPLP
                     YLGELVEDFGETGLAFGAQDVSSNEKGAYTGEVCAAMLHEVGARYGLVGHSERRQYHH
                     ESSELVARKFAAALHAGLVPVLCVGETLEQREAGQTEAVIASQLAPVLELVGAAGFAQ
                     AVVAYEPVWAIGTGRTASKEQAQQVHAFIRGEVARIDARIADSLPIVYGGSVKPDNAG
                     ELFAQPDVDGGLVGGASLVAADFLAIARAAAAN"
BASE COUNT         3206 a         5419 c         5504 g         2795 t
ORIGIN      
        1 ggcaggattt gaacctgcga ccttcgggtt atgagcccga cgagctgcca gactgctcca
       61 ccccgcatca gaagcggaat catgaggcat tgctgcgaaa aatgcaagct ttccctcatt
      121 catcaaaccg gttggcgccg attcgatgtt ggtagcgggg gcaggatttg aacctgcgac
      181 cttcgggtta tgagcccgac gagctgccag actgctccac cccgcaccgg aagtgtttga
      241 actgctgccc tgctctttcg aggagggcta ccgcaacgat gttctggctg aaccgctgca
      301 gtgacaactc aggctgcgca tattacacga atcgcgcagc tttgtgtcaa cttttatgca
      361 agatgcgcaa atgcctgctg gcaccagacc atgatcgggt tccaggcaat gcccagcgcc
      421 agcagcgcca gtgcgttcac gcccagcacc aggcccagta cgcggtcgtt gctgcgcggc
      481 atggcctcgc ccaccggctc atcgaaatac atgaccttga tgacgcgcag gtagtagaag
      541 cagccgacca cggcgcacag cacgcccagg atcgccagcc acagcaggcc gccgttgacc
      601 gccgcgccga gcacggccag cttggtccag aagcccagga acggcgggat gccggccagc
      661 gacgccatga tgcacagcac caggccggcc atccacgggt tgcgggcgtt caggcccttg
      721 aagtcttcga tgttctcggc ttcgaagccg gcacgcgaca gcgcgatgat cgcgccgaag
      781 gcggcggtcg acatgatggc gtaggccagt gcgtagaaca gcgcggcggc atagccctgc
      841 gcgccaccac cggcgatgcc catcagcagg aagccgatgt gcgaaacggt ggagaacgcc
      901 agcatgcgct tgaggttgct ctgcgcaatg gccatcaggt tgccgatgac cagcgacacc
      961 gcagccaggc cggcgatcag caactgcagt tcggtcgaca acgggcccac gcccatttcc
     1021 agcaggcggt aggccatgcc gaaggcggcc agcttcggcg ccgagctgat gaacagcgcg
     1081 atcggcgccg gggcaccctg gtacacgtcg ggcagccaca tgtggaacgg cgcggcaccc
     1141 agcttgaagg cgacgccggc gatcatgaac accgcaccgg tgatcagcag cacgcgttct
     1201 tccgaatgcg ggatggcatc gcggatgacg tccaggtgca ggctgccggt ggcgccgtag
     1261 atcagcgaca tgccgtacag cagcaggccc gaggccagcg aaccgagcac gatgtacttc
     1321 atcgccgctt ccgaggccag gccgttctcg cggttgctgg ccaccagcgc gtaggagcac
     1381 agcgccagca gttccaggcc caggtagacc atcagcaggc tgccggccga gaccaggatc
     1441 atcatgccgg cggtgccgaa caggatcagc accgggatct cgccctggaa caggttgcga
     1501 tcacgcaggt agcgccagcc atagaccagg gtcaggccgc tgagcagcac gatcccggtc
     1561 ttcatcacgt ccgcggcggt atcgcgcacg aacatgccat ggaagacctc cccctgcccg
     1621 cccacgccgg tggccagcat gaacagcacc acggccagcg cagcgagcga gaacaggtgg
     1681 gtgacgatct tgttccggtt gctgacgaac aggtcgagga tcatcagggc gaaggcgctg
     1741 ccgatcagca ccagctcggg agcgagcggt ggcaggtcag cggcggtcaa tggcagcagc
     1801 ggcgaggtgg tcatcatcaa atcctggaat tacagcagct tgctggatgc gatctgcatc
     1861 gccagcttcg cgatcgaggg ctccatcagg tcggtcagcg gcttggggta gatgcccagg
     1921 gccagcacgc cgatggcgaa cacgcccagc accagccatt cgcggccgtt gatgtccttc
     1981 agttcggcaa cgtggctgtt ggccacttcg ccgaagaaga tgcgcttgta cagccacagg
     2041 gtgtaggcgg cgccgatgat cagggtggtg gccgcgccca gcgcgatcca cggattacgc
     2101 tggaacgccg acaggatgac catgaactcg ccgacgaagc cgctggtacc cggcaggccc
     2161 gcgttggcca tgaagaacag catggcgaag gtggcgaacc acggcatcac gttgaccacg
     2221 ccgccgtaat cggcgatgcg gcggctgtgc atgcggtcgt acagcacgcc gacgcaggag
     2281 aacatcgcgc cggacacgaa gccgtgcgag atcatctgca ccatggcgcc ctgcaggccc
     2341 aggcgggccg catcggcgtt gccggcttca cgcaccagcc acagggcgat gaaggtaccg
     2401 agggtgacga agcccatgtg cgcgatcgac gaatacgcga tcagcttctt catgtcgtcc
     2461 tgcaccaggg cgaccaggcc gacgtagatc accgcgatca gcgacagcgc gatcaccagc
     2521 caggcccatt cctgcgatgc gtccgggacg atcggcaggt tgaagcgcag gaagccgtag
     2581 ccaccgatct tcagggcgat ggcggccagg atcaccgaac cggcggtcgg cgcttccacg
     2641 tgggcatccg gcagccaggt gtggaccggg aacatcggca ccttgaccgc gaaggcgatc
     2701 aggaaggcaa agaagatcca ggtctgttcc ttggccgaca gcggcagcgc gtacaggtcg
     2761 gccagctgga agctgccgcc cttcaggtac aggtagatca gcgccaccag catcagcacc
     2821 gagccgagga aggtgtacag gaagaacttc agcgcggcgt agatgcggcg cgggccaccc
     2881 cagacaccga tgatcaggaa catcgggatc agcatcgcct cgaagaacac gtagaacaac
     2941 atcgcgtccg tggccgagaa gataccgacg gtgacgcctt ccaggatcag gaaggcggcc
     3001 acgtactggt tgacgcgctt gtcgatggcg ctccaggcgc cgatcagggc aagcacgctg
     3061 accagcgtgg tcagcaggat cagcgccacg gcgatgccgt ccacgcccag gttgtagccg
     3121 atcttgtacg ccgggatcca ggcatgggtc tcgacgaact gcagaccgtc gatgcccgcg
     3181 ttgtagccgc tcagcagcga gaggctcgcc acgaaggtca gcaccgcgac gcccagcgac
     3241 gcccagcggg cggtctgcgc atcacggatc gcaaggatca gggcgccacc gaggatcggc
     3301 agccagatga ggacactgag tagaggccag ttcgacacgt cttcttattc cgtacaggtc
     3361 atcaacgcag gtaatgcatc agcacgccca gcagggcaat caggccgatg atcatcgcga
     3421 aggcgtagtg atagaggaaa ccggattggg tacgacgcag cacgccggct gcgacgtcca
     3481 caacacgtgc cgagagattg accacgccgt cgacgatgtt gctgtcgatc cagcgtgcga
     3541 ccttgcccag cttgacgctg ccgccggcaa agccatcgat ccacagcttg tcgaagccgt
     3601 acttgttttc cagcaccgac accagcgggg cgaaggtctt gcgcgccttg cccgacaggt
     3661 ccggcttcca caggtagaac agtgcggcca gcaggaagcc cgccagggtc agccagaacg
     3721 gcggcagcat catgccgtgc agcgcgaacg ccaccggccc gtggaactct tcacccagga
     3781 aggcaacggt gttcttggcc ggatcgtaga agttcacgat gccggtgaag aacgtgttga
     3841 cctggccctg gatcgccgcg tgggcgtggt ggccggccca gtcggtgcca tgcagcatcg
     3901 gaccgatgct gaagaaaccg atggcgatcg acgggatggc cagcaggatc agcggcaggg
     3961 tcaccaccca cggggtttca tgcggctcat gcggaccgtg gccatggccg tggtcgtcat
     4021 gggcatcgcc gtggtgggca tcggcatggt gtgcgtctgc ggcgtggtga tcgtcatggc
     4081 cgtggccatg gtcatcatgc gcgtcgcgga agcgctcctt gccgtggaag gtcatgaaca
     4141 gcaggcggaa gctgtagaag ctggtcacca gcacgccacc cagcaccgcc cagtagccat
     4201 aggtggccac ccagctgttc tgcatgtgcg cgtggatctc ggccgcctcg atgatggtgt
     4261 ccttcgagta gaagcccgag aagaacggcg taccgaccag ggccagggta ccgatccaca
     4321 tggtgacgaa ggtgatcggc atgtacttgc gcaggccgcc catcttgcgc atgtcctgct
     4381 cgtggtgcat cgcgatgatg accgagccgg cacccaggaa cagcagggcc ttgaagaacg
     4441 cgtgggtcat caggtggaac acggcggccg aataggccga cacgcccagc gccacggtca
     4501 tgtagcccag ctgcgacagc gtggagtacg cgacgacgcg cttgatgtcg ttctgcacga
     4561 tgccgatcag gccggtgaag aacgcggtgg tggcgccgat gaagaggatg aagttcagcg
     4621 cggtctgcga cagctcgaac agcggcgaca tgcgggtaac catgaagata ccggcggtca
     4681 ccatcgtcgc ggcgtggatc agtgccgaga tcggggtcgg gccttccatc gagtccggca
     4741 gccacacgtg cagcgggacc tgggccgact tgcccatggc gccgatgaac aggcagatgc
     4801 agatgacggt ggcgatcgac cagatcaccg gctcgttcag cagctgcatg cccaggatcg
     4861 tgccgtccca gatctgcagc tgggcgcgcg ggtcggccag catgccggcc tgcgagaaca
     4921 cctgcgagta gtccagggtg ccgaacaccc acagcacgcc ggcgatgccc agcagaaagc
     4981 cgaagtcacc gacgcggttg accaggaacg ccttcatgtt ggcgaagatc gcggtcgggc
     5041 gcttgaacca gaagccgatc agcaggtacg acaccaggcc caccgcttcc cagccgaaga
     5101 acagctgcag gaagttgttg ctcatcacca gggtgagcat cgagaaggtg aacagcgaga
     5161 tgtagctgaa gaaccgctgg tagcccgggt cgtcctgcat gtagccgatc gtgtagatgt
     5221 ggaccagcag cgacacgaag gtcaccacca ccatcatcat cgcggtcagc ttgtcgacca
     5281 tgaagccgac gtgggccgaa tactggccga cttcgaagaa cgtgtagatg ttctggttga
     5341 acggctgcgc accgccccac agcagctggt agagcgtgta catcgacagg ccgcaggcaa
     5401 ccgcgacgcc gaggatggtg atggtctgcg cgccgaagcg cttgacctgg cgaccgaaca
     5461 ggccggcgat gatgctgccg aacagcggtg caagcaccac tgcgatcaac agactcttgg
     5521 agagagtgat ttccatctgt ggatcagccc ttcagcgaat cgacttcgcc gacattgatc
     5581 gtgcggcggg tacggaacag ggtcaccagg atcgccaggc cgatggcggc ttccgcggcg
     5641 gcgacggtca ggatgaagaa cacgaacagc tggccggacg gatcgcccag ctgacgcgag
     5701 aagccgacga aattgatgtt caccgacagc agcatcagtt cgatcgacat cagcaggacg
     5761 atgacgttct tccggttgag gaagatgccg gccaggctga tggcgaacag caccgcgccc
     5821 agcgcaagca tgtggccaag ggtaatcacg gctgggtctc ctcgccggcg gccggcttgc
     5881 tgttgctgtg cacgaccggt gcttcggcgc ccatcttgac catgcgcagg cgctggccgg
     5941 ccttgaccat ggtctgctcg cccgggttct ggctcttcac gccggtacgg cggcgcaggg
     6001 tcagcatcac ggcggcaacc acggccacgg tcaggatgac ggcggcgaat tcgaacggca
     6061 gcaggtactc ggtgaacagc gtgcgcgcca gccaggtgac gttggagctg tcggcggcga
     6121 ccgcagcggc gttgtcggcc gggaacggcg tgaccgagcg ggccttgacg ccgatcagga
     6181 tcagcatctg caccagcatc gcgaccgcga cgatcaggcc gaccggcagg tagcgcaccc
     6241 agccctcacg cagcttggtg gggtcgatgt ccagcatcat caccacgaac aggaacagca
     6301 ccatcaccgc gccgacgtag accagcacca gggcaacacc gaggaactcg gcgcccacca
     6361 gcagccacac gcaggcgatg gagaagaagg tcagcaccag gcagagcacg gcgtgaaccg
     6421 ggttgcgcac gctgatcacc gcaccggccg aaaccgttgc tgcgatggcg aacacccaga
     6481 aagcgatatt tacccaatcc atctctcgac ctcagcggta agcggcatcg gcggcgcgac
     6541 gctcggcgat ctcggactcg agacggtcgc ccagggccag cagctgcggc ttggtaacga
     6601 tgttttcgcc acgattctcg aagtggtact cgaggatgtg ggtttcgacg atcgagtcca
     6661 ccgggcagct ttcttcgcag aagccgcaga agatgcactt gaacaggtcg atgtcgtagc
     6721 gcgtggtacg gcgggtgccg tcttcgcgct tggccgagtc gatggtgatg gccagcgccg
     6781 ggcacaccgc ttcgcacagc ttgcaggcga tgcagcgctc ttcaccgttg ggataacggc
     6841 gcagggcgtg caggccacgg aagcgcggcg actgcgggaa cttctccatc gggtacatca
     6901 tcgtgtactt cggcttgaag ctgtacttca gcgtcagcca gaggcccgcc agcagttcga
     6961 gcagcagcag gctcttgaag taatgggtaa tcctgttcat cactttagac gcccttttga
     7021 atcacgccga agaacaccat gacggcggta accgcgatcc acagaatggc cagcggaatg
     7081 aagaccttcc agcccaggcg catgatctgg tcatagcgga agcgcgggaa gctggcacgg
     7141 aaccagatgt aggcactggc gaagaagaac accttgacga acagccacgg tgcaccgccc
     7201 ttccagatcc agtcgaccag cggcgagaca tcgccgaagt tgacccagcc ctggaccggg
     7261 ctcagccagc cgccgaggaa gaagatcgag atcaggaagc tgatcaggat catgttcgcg
     7321 tattcggcca ggaagaacag cgcgaacgcg ccgccggagt actcgaccat gtggccggcg
     7381 acgatttccg actcgccttc caccacgtcg aacggcgcgc ggttggtttc cgccacgccc
     7441 gacacccagt agatgacgaa cagcgggaac agcggcagca ggaaccagtc gaagaagccg
     7501 gagctgccgg cctgcgccat cacgatgttg ctcaggttca ggctgcccga ggcgatcatc
     7561 acgccgacca gggcgaagcc catggcgatt tcgtagctga tcatctgcgc cgaagcgcgc
     7621 atggcaccga ggaacgcgta cttcgagttg gacgcccaac cggccaggat gatgccgtag
     7681 atgcccagcg aggtcatcgc cagcaggtac agcaggccgg cgttggcgtt ggacagcacg
     7741 atctgcgaat cgaagggcac caccgaccag gccgcgaagg ccggggccag ggtgatcagc
     7801 ggggccagca ggtagatcgc cttgttggcg ctgctcggct gcaccacttc cttgaacagc
     7861 agcttgaaga cgtcggcgaa ggcctggaag atgcccatgc cgacgtacat cgggccgtgg
     7921 cggacgtgca tccagccgat cagcttgcgt tcccagacca cgtagaaggc caccgagatg
     7981 atcaccggaa cggtgatcac caggatcttc aggatgatcc agatcagcgc gccgatgtca
     8041 ccgaggccaa gcagccactg gtgcagcggg tcgaccgcgt tcaacagcaa ttcgttcatg
     8101 cagccaccac cgttacgcga gcggcaccca gcggcgcggt cgcgccgtgg cccgattcaa
     8161 tccagaccga acccgcagcg acgcgggcgt cgaccaccac cggcagggtg gccttgccgg
     8221 catcggtgcc gaccttggcc atctgccctt cctgcagctg caggcgagcg gcatcttcag
     8281 cgttcagcac gatgcgcggg gcgttgttga gcggatgcga ctgcagcgcc ggggcgcgac
     8341 ggaccaccgc atcggtgcgg tagatcgcgg cggtcgaagc cacttccagg ccttcgccgg
     8401 tcaccgccag ctgcgccgaa gcggcaacgc tgaccgacac cggggccagg ctggcgcgca
     8461 ggccggccag gtcggtgaag tcgaaaccgg ccagcgccat ttcgccgccc agtgcgcgca
     8521 gcacgcgcca gccttcacgc gcctcgcccg gcagcttgcc gccggcacgg gccgactgct
     8581 cgcgaccatc gaggttggtc agggtggcgt cgatttccgg cagcgcgccg atcggcagga
     8641 tcacatcggc gacgtcgcgg gtggagacac aggcgaactg gctgaaggcc accaccttgg
     8701 caccgaccag cgccttgcgc gcagccggag catcggcgaa gtccaggccc ggctccaggc
     8761 cgtacaccac gtaggcctgg cgcggctgcg ccagcatcgc ggcgacgtcc ttgccggccg
     8821 gcagcacgcc ggcacgggtc aggccaacgg cattggcgcc ctgcgggatg cggcacagct
     8881 tggcaccggt ggcggcagcg aagtcacgcg cggcggcgcg gatcgcggca gcctgcgggt
     8941 ggttctcggc gatgccgccg acgatcaaca cggtgttgtt gccgccctgc actgccgaac
     9001 gcagctcggc gttggccagc gcgtcgacga acttcgacgg cgcgacgatc tgcttgccgg
     9061 caatgctgaa ggcaaagtcg aagtccaccg ggttgacgac gtggatcttg gcgccattag
     9121 tggtctgcgc cttgcgcagg cgggcgtgca gcagcggcag ttcgtggcgg atgttgctgc
     9181 ccagaacgac gatgcggtcg gcgccttcga tctcggccag cggcaggccg aacacttcgg
     9241 cggttgcggc gtcggagaaa tcgcggttgt tgatgcggtg gtcgatgttg ctcgaaccca
     9301 ggcccttggc caggcgggcc agcagcgcgc cttcctcgtt cgaggtcgac ggatgcacca
     9361 gcacgcccag gttgtcgccc tggttggcct tgaggatttc ggcggccgcg gccaggcctt
     9421 cggcccagct cacttccttc cactcgccat tgaccttgcg cagcggcttg accgcacggt
     9481 cttcgctgta caggccctgg tgagagtagc ggtcacggtc ggacagccag cattcgttga
     9541 cggcttcgtt gtcgcgcggc acggtgcgca gcacttcgcc gcgacgcacg tgcaggaaca
     9601 ggttcgaacc catcgcgtcg tggtaaccca gcgactcgcg tgcggtcagt tcccacggac
     9661 gggcgcggaa ctggaacacc ttgttggtca gcgcaccgac cgggcagacg tcgacgacgt
     9721 tgccggacag ttcggtggtc agcggcttgc cgtcgtaggt accgatctgc aggttctcgc
     9781 cgcggtacat gccacccagt tcataggtgc cagccacgtc ggcggtgaag cgcacgcagc
     9841 gcgtgcactg gatgcagcgg gtcatttcgg tggcgaccag cggacccatg tcctcgtccg
     9901 gcaccacgcg cttgcgctcg ttgaagcggc tgaccgaacg gccatagccc agcgacacgt
     9961 cctgcagctc gcactcgccg ccctgatcgc agatcgggca gtccagcggg tggttgatga
    10021 gcaggaactc catcaccgag cgctggaact tcagtgcctt ctcgctacgg gtggcgacct
    10081 tcatgccgtc catcaccgga gtggcgcagg ccggcgccgg cttcggcgac ttctccacgt
    10141 ccaccaggca catgcggcag ttggcggcga tcggcaactt ctcgtggtag cagaagcgcg
    10201 gaatcgaaat gccggccttg tcggcggcct ggatgatcat cgagcccttg ggcacgacca
    10261 gcgacttgcc atcgatctcg atggtgacgt gatcgggtgg gacgctcgga tttacgggtt
    10321 gcgcgctcat gcagcggctg cctccacctt cttgccgtca accatcgaat gaccgttgac
    10381 gatgtagtac tcgaactcgt cccagaactg gcgcaggaag ccctggatgg gccatgcagc
    10441 cgcttcgccg aacgcacaga tggtgtggcc ttcgatctgg ccggccactg ccttcagctg
    10501 gtgcaggtct tccatcgtgg ccttgccggc gacgatgcgc tccagcacgc ggtgcatcca
    10561 gccggtgcct tcacggcacg gggtgcactg gccgcaggat tccttgtgga agaactggct
    10621 gatgcggcag gcgaacttga cgcagcagac gctgtcatcg agcaccacga cggcgcccga
    10681 acccaggccc gagcccaggg cacggatggt gtcgtagtcc atcggcaggc ccttcagctc
    10741 ggccgcggtc agcaccggca tcgacacgcc acccggaatc gcgcccttca gggtgcggcc
    10801 cggacgcagg ccaccggcca tttccagcag gtcgtcgaag gtggtgccca acggcacttc
    10861 gaagttgccg ccgttctgca cgcaaccgga caccgagaag cacttcgggc cgccgttggc
    10921 ggtcaggctc aggcccttga accactccgg gccgttgcgg atgatcgccg gcaccgaacc
    10981 gtaggtttcg gtgttgttga tcgtcgacgg cttgccgtac aggccgaagt tcgccgggaa
    11041 cggcggcttg tagcgcggct ggcccttctt gccttccagc gattccatca gcgcggtttc
    11101 ttcgccgcag atgtacgcgc cggcgcccag cgcaccatag atgtcgatgt ccacgcccga
    11161 gcccatcacg ttcttgccca gccagccatt tgcataggcg tcggccaggg cctgctcgaa
    11221 gtgctcgaac ggctcgtggt ggaactcacc gcgcaggtag ttgtaaccca cggtcgaacc
    11281 ggtggcgtag caggcgatcg ccatgccttc caccaccgaa tgcgggttgt agcgcaggat
    11341 gtcgcggtcc ttgcaggtgc ccggctcgga ttcgtccgag ttgcagagga tgtacttctg
    11401 catgttgccc ttgggcatga aggaccactt caggccggtc gggaagcccg cgccaccgcg
    11461 gccgcgcagg cccgaggcct tgaccatctc gatgacctgc tccggcggga tcttctcttc
    11521 gaggatcttg cgcagggcgg cgtagccacc ggtcttcagg tagctttcgt acgaccacgg
    11581 ggtgtcgtaa tgcagggtgg tgtagaccac ctggtgcggc agcggcgcgg ggccgaccgg
    11641 acccttggat tcgtggtgat gtgccatgcc cttactccag cccgtccagc agctcgtcga
    11701 ccttttccag ggtcagacgc tcatggtagt gaccgttgat gaccatcatc ggcgcgccac
    11761 cgcagccggc caggcactct tcctcgcgct tgaggtagac gcggccgtcc ggggtcgatt
    11821 caccgtgctt gatgcccagc ttcttctcgc aatggcggac gatgtcctcg gcgccattga
    11881 gccagcagct gatgttggtg cagatggcca cgttgttgcg gcccaccttc tcggtctcga
    11941 acatcgagta gaagctggcg acctcgtagg cccacaccgg cggcagatca aggtacttgg
    12001 ccacgccggc gatcagctcg tcggtcagcc aaccctcgtt ctgctcctgg gccgcatgca
    12061 ggccctgcag cacggcagag cgcttgcggt ccggcgggaa cttggacagc cagtgatcga
    12121 tgtgagcgcg ggtcttgtcg ctcagcacca ccatcgggtc gacgtcgcgc gccgcctcga
    12181 aattacctgt cgccttcatc ggccgacctc agcgaaatgc ataacgtgaa attgcagaaa
    12241 ctgcggcgcc ggcttgcgcc ggctgcctgc agcgggcgtt ggcgtggcgg acggcattac
    12301 cggtcaacct cgccgaacac caggtcgtag gtaccgatca tcgccaccac gtcggccagc
    12361 atgtggccgc gcacgaccga atcgatcgag gacaggtggg cgaagcccgg tgcgcgcagg
    12421 tgaacgcgga acggcttgtt ggcgccatcg gagaccaggt agcagccgaa ctcgcccttg
    12481 ggcgcttcca ctgccgcgta ggtttcaccg gccggcacgc aatagccttc gctgaacagc
    12541 ttgaagtggt ggatcagcgc ttccatgtcg tccttcatgt cctcacgctt gggcggagcg
    12601 accttgaagt tcttgaccat gaccgggcct gggttggcct tcagccacgc cacgcactgc
    12661 ttgatgatgc ggttggactc gcgcatttcg gcaacgcgga ccaggtagcg gtcgtagcag
    12721 tcgccttcct tgcccagcgg gatgtcgaaa tcgacggcat cgtacttggc gtacgggcgc
    12781 ttcttgcgca ggtcccaggc gatgcccgag ccgcgcagca tcacgccggt catgccccac
    12841 tggtgggcca gctccggagt gaccacgccg atgccgacgg tacgctgctt ccagatacgg
    12901 ttgtcggtca gcagggtctc gtattcgtcg acacgacccg ggaattcgtt ggtgaagttt
    12961 tccaggaagt ccagcagcga accttcacgc gaagcattga gctgcttcag cgccttgccc
    13021 ttgtgccagc gcgactcctt gtacttcggc atgtggtccg gcaggtcgcg gtagacaccg
    13081 cccggacggt agtacgccgc gtgcatgcgc gcgccggaga ctgcttcgta gcagtccatc
    13141 agctcttcgc gctcgcggaa ggcgtacagc atcaccgcca tcgcacccag gtcgagcgcg
    13201 ttggagccca gccacatcag gtggttgagg atgcgggtga tttcgtcgta catggtgcgg
    13261 atgtactgcg cacgctccgg cgcctcgatg cccatcaggg tctcgatcgc gcgcacgtag
    13321 gcgtgctcgt tgcacatcat cgacacgtaa tccaggcgat ccatgtagcc gatcgactgg
    13381 ttgaacggct tggactcggc cagcttttcg gtaccacggt gcagcagacc cacgtgcggg
    13441 tcggcgcgca tgatggtttc gccgtccatt tccaggatca ggcgcagcac accgtgagcg
    13501 gccggatgct gcgggccgaa gttcatggtg tagttgcgga tttcctgccg gctctcggcg
    13561 gcgttgctgg cgaaggcttc gccggcctgg tgtacgtggc tcacttcact gcctcctgcg
    13621 cgcgctcacc ttctgcggtc tgcagacggg cgtcgtcgcg gatcacgcgc ggcacgccga
    13681 cgcgcggctc caccgaggtg accggttcgt agatcacgcg cttcttttct tcgtcgtagc
    13741 ggacttcgac attgccgatc agcgggaagt ccttgcggaa cggatggccg acgaaaccgt
    13801 agtcggtcag gatccggcgc aggtccgggt ggccttcgaa gatcacgccg tacaggtcga
    13861 acgcttcgcg ctcgaaccag ttcaggcccg gccagatgcc ggtcagcgag gacaccaccg
    13921 gcagcgcttc gtcaggggcg aagcagcgca ggtgcatcat caggttgtgc tggtacgaac
    13981 gcagctgggc gaccacggcg aaacgctggg tcggcatgtg ctgcgggcgg gcaccgtcgg
    14041 caccgttctc ctcggtgggg aactcgcccc acgcgaagcg gccctgggcc ttgccttcga
    14101 cgccacggct gaagccctgc gaggacacgt cggcggtgtc ccattcgtcg gagccataac
    14161 cgaggtagtc gacgccgcag agatccacgg cctgctcgaa accaaactcg tcacgcagcg
    14221 ccagggcggt ggcgtgccac tcggcggcag gcacttccag cgtcacttcg ccgcggggtt
    14281 cgaccacgat gaccttcgca cctgcgaaac gtgcggagag tcggtcgatg aaggatgctt
    14341 gctctgccat gggggcttgg cgcgctcttg tcaggtgaag gggtcagcgg gcgatggtct
    14401 gtgtacgcca gatcttcttc tgcagctgca ggatcccgta caccagcgcc tcggcggtcg
    14461 gcgggcagcc cgggacgtag acgtccaccg gcaccacgcg atcacagccg cgcacgacag
    14521 aataggagta gtggtaatag ccgccgccgt tggcgcagct acccatcgag atgacccact
    14581 tcgggtccgg catctggtcg tagaccttgc gcagcgccgg ggccatcttg ttgaccaggg
    14641 taccggccac gatcatcacg tcggactgac gcggcgacgg gcggaacacc acgccgtagc
    14701 ggtcaaggtc caggcgcgcg gcgccggcgt gcatcatctc gaccgcgcag caggccagac
    14761 cgaaggtcat cggccacatc gaaccggtgc gtgcccagtt cagcagtgcg tcgacgctgg
    14821 tggtgacgaa gcccttttcc agcagcgggt tgtcgccttc cggccgcagg atgtcatcaa
    14881 cccggccttc cggcgtgggg ttgttcatga ggccatcgag agtctgaatc actcccattc
    14941 cagcgctccc ttcttccaga cgtaaatgaa accgaggaac agcatgccaa cgaacaggcc
    15001 catggtgatg agcgaacggg cgcccagttc catgaagacc tgggtccacg gcacgatgaa
    15061 gatgatttcc aggtcgaaga cgatgaactg gatcgcgatc aggtagtagc gcacgtcgaa
    15121 cttcatgcgc gcgtcttcga aggcctcgaa gccgcactca tacggcgaca gcttttccag
    15181 atcggggcgg cggggaccga ggaatcgacc aaccagcatc agcgtaatgc cgataccggt
    15241 ggcaacgatc agaaacagca gagacggcaa atattcggcc agcacagcga ttctctcttg
    15301 cctctgccgc cgcgcctgca ggcgctttgg catgggggag tggacgggaa tctgcctggc
    15361 gccttgcgcg ccagacgaac ccgctttact tacaaatggt gcccaagagg ggactcgaac
    15421 ccctacgact tgcgtcgcta ccacctcaag gtagtgcgtc taccaattcc gccacctggg
    15481 caaacgatca catcagacta tcttcccgat gcgccgcgta ttgtaaccgg cttcagtctt
    15541 tctgggagcc ttccgaaggc ttttcttcac cagaattcga agattccgcc ttggccggca
    15601 cattcgcggc cggaaccggg gcggccggga ccgcatcggc cttcggaacg gccggcagct
    15661 cgccggccgg agccgccggg gcactggccg ccggagcgga catcaggcca agatcctggt
    15721 cggccgccgg gcgggtgccg tgaccggcat accaggccat gaagaggctg ataccgaaga
    15781 acaccacggc cagccacttg gtcgacttgg acaggaagtt cgaggcgccg cgcgcaccga
    15841 acaccgtacc cgaggcaccg gcaccaaagc ccgaacccgc cgccgcaccc gagccacgct
    15901 gcatcaggat cagcgcgatc atggccacag cgaccagcac gtagacgaca ttgaggatca
    15961 acatcagcat tggaaaccgc cctcggacaa tacttctagg attagttcgc ggccgccgcc
    16021 cttgcgatgg ccaggaagtc cgcggccacc agggaggcgc cgccgaccag cccaccatcg
    16081 acatccggct gcgcgaacag ttccccggca ttgtcgggct tcacgctacc gccgtaaaca
    16141 atgggcagtg aatcagcgat tctagcatcg atgcgcgcga cttcgccacg gatgaacgcg
    16201 tgcacctgct gcgcctgctc cttgctggcg gtacggccgg tgccgattgc ccagaccggc
    16261 tcgtaggcca ccacggcctg ggcgaagccg gccgcgccga ccagttccag caccggcgcc
    16321 agctggctgg cgatgaccgc ttcggtctgg cccgcctcgc gctgctccag ggtttcaccc
    16381 acgcacagca ccggcaccag gccagcatgc agggccgcgg cgaacttgcg cgcgaccagt
    16441 tcgctgcttt cgtggtggta ctggcgacgc tcggaatggc cgaccaggcc atagcgggca
    16501 cccacctcgt gcagcatggc ggcgcagacc tcgccggtgt aggcgccctt ctcgttgctg
    16561 ctcacgtcct gtgcgccgaa ggccaggccg gtttcgccga aatcctcgac cagctcgccc
    16621 agatacggca gcggcggcag gatcaccacg tccaccccct ccagcgggag cccggtggcg
    16681 acctgcccca gcagttcatt ggcgaattga cggctgccat gcagcttcca gtttccggcg
    16741 acgatcttgc ggcgcatgag cgggtggctc ctgtgtgaag tcagccggtc atgatacccg
    16801 ctacggcaaa aatccgtttc cgtgtaagcg gttacatgga ttttcagcca acggcgcagc
    16861 ccctcgtggc gggtttgggg ttggtcgcat aaggcccggt gggttttgga gcttggccgg
    16921 gcgg
//
LOCUS       DAOKIP010000075        16900 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.075,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000075 DAOKIP010000000
VERSION     DAOKIP010000075.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 16900)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16900)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16900
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.075"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..735)
                     /locus_tag="QEL58_002064"
     CDS             complement(<1..735)
                     /locus_tag="QEL58_002064"
                     /EC_number="1.5.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019303260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pteridine reductase"
                     /protein_id="HDS1676539.1"
                     /translation="MSDTHPVVLITGSARRIGAAIARQFHACGWAVVLHANTSSAELQ
                     QAAFDFDNVRPGSVLALQADLRDADALPDLVEQAVTHFGRLDALVNNASNFFPTPLGQ
                     VTAEAMDELYAVNARAPLLLSQAAAPYLRRQQGCIVNLTDLHGTDPMRDHIAYTMAKA
                     ALEMATRSLALELAPKVRVNAVAPGAILWPEQGKDDFAREALLARTPLARIGTVEEIA
                     EAVYWLVAEASFVTGHTLRVDGGRTVS"
     gene            795..1979
                     /locus_tag="QEL58_002065"
     CDS             795..1979
                     /locus_tag="QEL58_002065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010480950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HDS1676540.1"
                     /translation="MQPTFPLPEADALAHSDQLAAALRAEILAQGGAMPFSRFMELCL
                     YTPGWGYYSAGASKFGGSGDFTTAPELGSLFAGSVANALAPVFAQLGAQARMLELGGG
                     TGAFAEAVLLRLAELDALPSRYAILEPSADLRERQQQRLQQNLPAELAARVDWIDRPF
                     EEDWEGVVFANEVIDALPTPRFLIRDGEVYEETVELDAEGRFMRGAQPADILLNGAVR
                     HIERYLEKPFAEGYRSEVLPQLPYWLQAVAGGLQRGAMLFVDYGYNRGEFYQHDRDDG
                     TVRAFYRHHVHNDVHRWPGLQDITASVDFTAMAEAGLHGGFELAGYCSQASFLLGNGL
                     DQVLLLAEERTDEVGRIQLRDQVKKLTLPTEMGERFQAIGLQRGVDFEPAFELGDLSW
                     RL"
     gene            1976..2368
                     /locus_tag="QEL58_002066"
     CDS             1976..2368
                     /locus_tag="QEL58_002066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VanZ family protein"
                     /protein_id="HDS1676541.1"
                     /translation="MSDARPLIKPLRRPRLWTVLWALAVLLVIVVCLIPPPPIPLPEN
                     SDKGEHFLAYFILAGSAVQLFRRGRPLLWVGVGLVLMGIGIEFAQGALTSNRTADPMD
                     ALANTIGVLAGMATVLTPLRDLLLRWRG"
     gene            complement(2504..4861)
                     /locus_tag="QEL58_002067"
     CDS             complement(2504..4861)
                     /locus_tag="QEL58_002067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014038499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="family 20 glycosylhydrolase"
                     /protein_id="HDS1676542.1"
                     /translation="MVKPSRARMRSAVLLGSLLALLPAMPALAADPTPAAEAPGPQLR
                     AGNLMLIPAPSNVQRGQGSGITVRADTVLYAEGEAAQRVATQFADLLARSGGPRLALA
                     KGKAAGKAGSIRFQIVPTFRDSGEGYTLDSTAQGVVIQAGNETGLFYGATTLAQLATG
                     GSNGVLPAVQIQDAPRFSWRGFMLDSARHFQSLDEIKRVLDAMAAHKLNTFHWHLTDD
                     QGWRMEIKRYPKLTEVGSCRLPAGDGGIDPVSGQEHPYCGFYTQEQIREVIAYAAALH
                     IQVIPEIDVPGHATAAIAAYPELGSISTPLKPISEWGVFPNLFNVEDSTVTFLENVLE
                     EVIALFPAKYVHVGGDEAVKDQWEASKQVQQRMRALGINNEMAMQSHVIKRLETFLEE
                     HDRRLIGWDEILEGGLPPQATVMSWQGTEGGLAAASAGHDVIMSPVGYLYLDYLQTAS
                     PNEPPGRPAQVNLGKLYNFEPVPAELAADKRGHILGLQANMFTEHTRSYARLQHNLFP
                     RLAAVAETGWSTPEHRDFRDFLARLPAQLQRYRAWGLAYAQTPFEVGVDYTDNRTANT
                     VTVSLANPLGYEVRYSIDGQPVSAQSPLYQQPLTATLPATVQAAAFYQGQMLAAKPTV
                     AAFTAQSLLSRRSDELLSCVGQKGLVLRLEDDGPREGTRAVFNVDIFQPCWRWPQAQL
                     DGVGSVEVRAGRIPYYFQLAHDEPKRRFEKAKRAHGEMQVRRGDCSGKVLAEVALPAQ
                     PDADGFVTLRATLPKGSQGNGDLCINFTGDTRPAMWVLDEVTLGK"
     gene            complement(4973..7672)
                     /locus_tag="QEL58_002068"
     CDS             complement(4973..7672)
                     /locus_tag="QEL58_002068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005414491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDS1676543.1"
                     /translation="MNTRKTLLSAAIVSCIAFSAHAQQAAQTATDLDTVTVTGIRGSM
                     EKSLDSKREANARVEVVTAEDVGKLPAHNVADTLQRLPGVNISSSSADEGGFDEADRV
                     SLRGTSPSLTQTLINGHSVGSADWFVLSQGSNVGRSVSYTLLPSELVRSVEVNKSSQA
                     KLQDGGTTGTVNILTRKPLEFSKQITAEASIGAVRSDQAKSNDPQLSGLFNYKNDDGT
                     FGVMVQGFSQKRELRREAQEIPSGFFKIDPNGSVAKSNPDLAGVYAPALLGSTLFEQT
                     RERKGGLISLQFKPADNLTLGLEGFSSKMEANNYNRNFMLWGSKIMGDDKNDAGVITR
                     PGQAPLPGYVVKDGVLTNANFAGVAGTPYAVYDMIYREATAKSNYITLDADWQINDSL
                     NAKFQAGSTKGTGTTPRQFIAEVTVADGGGANWTTHGNGSPVDWNVGGDISPNGVTSF
                     GTWGNQEVTAEDKEKWFTADFNQYFNDGGALNSLDFGVRYADHKREALSPEGATPGAI
                     WDALKGAPTGSFPGGFAGGIGGNFPRNIWYYTPGALKDAVLNNSTWLAGNDGPTGRHN
                     YGAEWKVAEKNFAGYVQANFSGDRWSGNVGLRYVNIKQDIDTYQAVSDLANADVSSLF
                     GKWKSLSFENKHDRILPSANLKFDLADDLVFRFAASQTQTLPDFSALGASSWGSDLTK
                     VGGGGNPKLKPVLSTNFDANLEWYFMPRGLVSLGAYSMNLKDYVAFGTQTQMLYSELS
                     NQLEAYQVAVPVNADGKVYGMEFAYEQPLGENFGLNANYTYADGSTSHTWEDGSNNLL
                     GTSKNTYNVGAYFENDTFGARVSYTYRSSFLIGLKGASPYYQDDFGTLSLSLSYKATD
                     WMSVSFDALNLNNPTLKYYQSASIPSAFYENGRQYYLNFRFKY"
     gene            complement(7816..8832)
                     /locus_tag="QEL58_002069"
     CDS             complement(7816..8832)
                     /locus_tag="QEL58_002069"
                     /EC_number="2.7.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005411047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucokinase"
                     /protein_id="HDS1676544.1"
                     /translation="MTASHPAPAHVLSRVAPSFLAADVGGTHVRVARVQASGDTAHPV
                     QVLEYRKYRNADHAGLSAILSDFLGEGPRPTHCVVASAGYAREDGTVITANLPWPLSA
                     RQVEADVGLQRVYIVNDFEAVAYAAAQVDASGVLHLCGPETAARGPTLVVGPGTGLGA
                     ALWIPTAHGPVVLPTEAGQPTLAASTELEMAIVRHMQRDRAHVSIEHAISGPGLMNLY
                     RAVCALQGQAPTLASPDAVTAAAMADTDAHARQALDVFCGLLGSTIGDMALFYGAHGG
                     VYLAGGILPQIREYLHASTFVERYLQKGPMGEALARIPVKVVEHGQLGVVGAASWYLQ
                     QSAA"
     gene            9209..10498
                     /locus_tag="QEL58_002070"
     CDS             9209..10498
                     /locus_tag="QEL58_002070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005414489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar MFS transporter"
                     /protein_id="HDS1676545.1"
                     /translation="MSAVPAASARPNVATSIAIVGVLFFLIGFFTWLNGPLITFVKLA
                     FELSEVGAFLVLMVFYLSYFFLALPSSWILRRTGMKKGLSLSLLVMAGGAALFGEFAT
                     QRWYPGALGGLFVIGSGLALLQTAINPYISILGPIETAARRIALMGICNKIAGMLAPV
                     LIGTVVLHGIGDLSASVAVADEATKAQLLNDFAAKIHAPYLAMAGLLVLLAVAVLFSP
                     LPEIKSAEANATPTTAGAAERRSIFQFPHLWLGVLCLFVYVGVEVMAGDAIGTYGHGF
                     DLPLDQTKMFTSLTLFAMLIGYVVGLLLIPKVVSQSRYLTISAVLGVVFCLGAWVTHG
                     YVSVGFVAALGFANAMMWPAIFPLAIRGLGRFTETGSALLVMGIAGGAIIPQLFAVLK
                     QHIDFQLVFVLLMVPCYLYILFYSVIGHRAGLPQDKA"
     gene            10538..11603
                     /locus_tag="QEL58_002071"
                     /pseudo
     CDS             10538..11603
                     /locus_tag="QEL58_002071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019338837.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
     gene            11611..12639
                     /locus_tag="QEL58_002072"
     CDS             11611..12639
                     /locus_tag="QEL58_002072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005419331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIS domain-containing protein"
                     /protein_id="HDS1676546.1"
                     /translation="MPLSDPTSTLMFAEAAEAADVVARQFSRNHATMETLAASLRAAP
                     PPFVVTCARGSSDHAATYGKYLLETQLGLVVASASPSVGSVYAAPLQLRGALFIVISQ
                     SGKSPDLLRNAEAAKAAGARVIALVNVEDSPLAQLADTVIPLHAGAEKSVAATKSYLA
                     SLAALLQLAAYWKQDSNLRAALDLLPDAMRAAWQCDWSAVTDGLVEATNLFVLGRGLG
                     LGAAQEAALKFKETCSLHAEAYSSAEVKHGPMALVDRGFPVLAFAQPDETGAGTRAVV
                     DEFTARGAQVWLAGAGGNLPVAAAPHPLCAPLLTVQSFYRAINALALRRGFNPDLPPH
                     LNKVTETV"
     gene            12639..13787
                     /gene="nagA"
                     /locus_tag="QEL58_002073"
     CDS             12639..13787
                     /gene="nagA"
                     /locus_tag="QEL58_002073"
                     /EC_number="3.5.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019338835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylglucosamine-6-phosphate deacetylase"
                     /protein_id="HDS1676547.1"
                     /translation="MATVLRNARILAGDEFRDDLAVVIEDGRISALLPDAAPQLGQAA
                     EQVDLGGGWLLPGFIDVQVNGGGGALFNNTPDVASLRTIAQAHRRFGTTAMLPTLISD
                     DVGVMREAIGAMREAIAQGVPGVIGIHLEGPYIAPARKGTHDASKFRVPDEEEIALAA
                     SLDNGVTLLTLAPERVPLETIRALVERGVIVAAGHTAGTYEEIRAGLDAGVRGFTHLY
                     NAMSPLQGREPGAVGAALEDRDSWIGIIVDGVHVHPASLRVALAAKPRGRLLLVTDAM
                     PPVGADDPSYVLYGETITAIDGVVRNAAGALAGSALDMATAVRNTVQLLGQPLAEAAR
                     MASTYPAQFLNVDDRLGHIAEGYQADLVLLDDALQVRGTWIAGQYEAA"
     gene            13787..14854
                     /locus_tag="QEL58_002074"
     CDS             13787..14854
                     /locus_tag="QEL58_002074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012481272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1624 domain-containing protein"
                     /protein_id="HDS1676548.1"
                     /translation="MNATPPRRLGSIDALRGITVAAMLLVNNPGDWSAVFAPLRHSEW
                     HGCTPTDLVFPFFLFLVGVSMAFSVAPRALDASVRPALARGVLERALRILLAGALLHL
                     LIWWALHTHHFRIWGVLQRIAVCAALVGVLAVYARPRVQAAVLVTLLVGYTVLLLGIG
                     DLAPWTNPASRLDTALFAPWIYQWHADTGLGHDPEGLLSTLGALASTVLGLFAGGLLR
                     NGRSAALAGLGVATAVLGLLLATVLPLNKQLWTPSYVLWTGGLAALALWLGHVLIDRK
                     GWPALGRRFGVNAITAYLGASVMSVVLMATGAWGWIWQQLADAMPQALELASILQAVA
                     FVALWWGVAWWLDRRKIYLKI"
     gene            15128..>16900
                     /locus_tag="QEL58_002075"
     CDS             15128..>16900
                     /locus_tag="QEL58_002075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
                     /protein_id="HDS1676549.1"
                     /translation="MSRAVPRAFRPRRLTVSVLQALAVPSVMLMSASVAWAGCDAIAP
                     VAGQTVTCTASAPNPQTVPIAASGAAGITVNVASSAQLQQSGGGSAISLVGAGGHLLS
                     NQGAISSVSGVAVQLGGGSRVENLGSISTGNNIALQFVGNGDSVLVNRGTLSGGTGVQ
                     FGAGNDRLEMQAGSITGGVLQGDGNDVLLLNDGTLDRVDQGSGDDQMTVTGGTITGVV
                     AQGSGRDDFVMTGGTVGALQQGDNIDTFRMSGGRIIGAFEDGDRAWMTGGRIGRVNMK
                     LDKNLWDMSGGTVDGNVVTGFDTDTIIISGTAYIGGNISVSGGADSVTITGGTVRGQV
                     LLSTGNDTFNWTDGGIVYGAIDMGPDDDVANLANLTQTHVGAVPLFDGGSGTDQLNLT
                     NVKTTGVGRFQNWETINLASSTELTFDGALVLGDAGTGTGTLTVDDTSTLFAGGGNYA
                     IRPFSASGLVNVVNAGRIDLTASGSAGDAFTVRGNYRGDGGGVYLKTVLGADDSASDT
                     LVFDGGTATGSTGIGILNVGGGGAATRTDGILVVQALNGATTAPGAFSLFAPVAAGAY
                     EYFLFKGGVSAGTGENWYLRSTLVQ"
BASE COUNT         2557 a         5563 c         5778 g         3002 t
ORIGIN      
        1 gctgaccgta cgcccaccgt ccacgcgcag ggtatggccg gtgacgaagc tggcctcggc
       61 caccagccag tacaccgcct cggcgatctc ctcgaccgtg ccgatccgtg ccagcggcgt
      121 gcgcgccagc agcgcctcgc gggcgaaatc atccttgccc tgttccggcc acaggatcgc
      181 gccgggcgcc accgcattga cccgcacctt cggcgccagc tccagcgcca gcgaacgggt
      241 ggccatttcc agcgcggcct tggccatggt gtaggcgatg tggtcacgca tcggatcggt
      301 gccgtgcagg tcggtcaggt tgacgatgca gccctgctgg cggcgcaggt agggcgcggc
      361 tgcctgtgac agcagcagtg gcgcgcgcgc gttgaccgca tacagctcgt ccatcgcctc
      421 ggcagtgacc tggccgagcg gcgtggggaa gaagttggag gcgttgttga ccagcgcgtc
      481 caggcggccg aagtgggtga cggcctgttc caccaggtcg ggcagggcgt cggcgtcgcg
      541 caggtcggcc tgcagggcca gcacgctgcc cgggcgtacg ttgtcgaaat cgaacgcggc
      601 ctgctgcagt tcggcgctgg aggtgttggc gtgcagcacc accgcccaac cacaggcgtg
      661 gaactggcgg gcgatggccg caccgatccg gcgcgcgctg ccggtgatca ggaccacggg
      721 gtgggtgtcg ctcatcgagg gtcctccaag gctcggctat cctgtgcacc attgtcaccg
      781 cattcgaaga cgccatgcag cccaccttcc ccctgcccga agccgatgcc ctggcccaca
      841 gcgaccagct ggccgccgcc ctgcgcgccg agatccttgc gcagggcggg gcaatgccgt
      901 tctcccgctt catggagctg tgcctgtata ccccgggctg gggctattac agcgccggcg
      961 ccagcaagtt cggtggcagc ggcgacttca ccaccgcgcc tgagctcggc agcctgttcg
     1021 caggcagcgt ggccaatgcc ctggcgccgg tattcgccca gctgggtgcg caggcgcgga
     1081 tgctggagct gggcggcggt accggtgcct tcgccgaggc ggtgctgctg cgcctggcag
     1141 agctggatgc gctgccctcg cgctacgcca tcctcgaacc cagcgccgac ctgcgcgagc
     1201 gccagcagca gcgcctgcag cagaacctgc cggccgagct ggccgcgcgc gtggactgga
     1261 tcgaccgccc gttcgaagag gactgggagg gcgtggtgtt cgccaacgag gtgatcgacg
     1321 cgctgccgac gccgcgcttc ctgatccgcg atggcgaagt ctatgaggaa accgtcgagc
     1381 tggacgccga aggccgcttc atgcgcggcg cgcagccggc cgacatcctg ctcaacggcg
     1441 cggtgcgcca tatcgagcgc tatctggaga agcccttcgc cgagggctac cgttccgaag
     1501 tgctgccgca gctgccgtac tggttgcagg cagtggccgg tggcctgcag cgcggtgcga
     1561 tgttgttcgt cgactatggc tacaaccgcg gcgagttcta ccagcatgac cgcgacgatg
     1621 gcactgtgcg tgcgttctac cgccaccacg tgcacaacga cgtgcatcgc tggccgggcc
     1681 tgcaggacat caccgcctcg gtggacttca ccgcgatggc cgaagcgggc ctgcacggtg
     1741 gtttcgagct ggccggctac tgcagccagg ccagtttcct gcttggcaac gggctggacc
     1801 aggtattgct gctggccgag gagcgcaccg atgaagtcgg ccgcatccag ctgcgcgacc
     1861 aggtgaagaa gctgaccctg ccgaccgaaa tgggcgagcg cttccaggca atcggcctgc
     1921 agcgtggcgt cgatttcgag ccggccttcg aattgggtga cctgagctgg cggctgtgag
     1981 tgatgctcgg ccgctgatca agccgctgcg caggccgcgg ctatggaccg tgctgtgggc
     2041 gctggcggtg ctgctggtga tcgtggtgtg cctgattccg ccgccgccga ttccgttgcc
     2101 ggaaaacagc gacaagggtg agcacttcct ggcctatttc atcctggccg gcagcgcagt
     2161 gcagctgttc cggcgcggcc gcccgctgct gtgggtgggc gtgggactgg tgctgatggg
     2221 catcggcatc gagttcgcgc agggcgcgct gaccagcaac cgcacggccg atccgatgga
     2281 tgcgctggcc aacacgatcg gcgtgctggc cggcatggct accgtattga ccccgctgcg
     2341 cgacctactg ctgcgctggc gcgggtaaag gcgtgccaac caaggttggc aactaccggt
     2401 agatccacgg cacgcatgga gccgtcccgt agatccacgc catgcgtgga tgaactaccc
     2461 tgggtgccga ccaaggtcgg cacccaccag gacagacctg ccctcatttc cccagcgtca
     2521 cctcatccag cacccacatc gccgggcgcg tatcgccggt gaagttgatg cacaagtcgc
     2581 cgttaccctg gctacccttc ggcagcgttg cacgcagggt cacgaagcca tcggcatccg
     2641 gctgggccgg caacgcaact tcggccagca ccttgccgct gcagtcgcca cggcgcacct
     2701 gcatctcgcc atgcgcacgc ttggctttct cgaagcgacg cttgggttcg tcatgggcca
     2761 gctggaagta gtacggaata cggcccgcac gcacttccac gctgccgacg ccgtccagct
     2821 gcgcctgcgg ccaacgccag cacggctgga agatgtcgac gttgaacacc gcgcgggtgc
     2881 cttcgcgcgg gccatcgtct tccaggcgca gcaccaggcc cttctggccc acacaactga
     2941 gcagctcatc gctgcggcgg ctgagcagcg actgcgcggt gaacgcggcg acggtcggct
     3001 ttgcggccag catctggccc tgatagaacg cggcggcctg caccgtggcc ggcagcgtcg
     3061 cggtcagcgg ctgctggtac aacggcgact gcgcgctgac cggctggcca tcgatgctgt
     3121 agcgcacctc atagcccagt gggttggcca gcgatacggt cacggtgttg gcggtgcggt
     3181 tgtcggtgta atccacgccc acttcgaacg gcgtctgcgc ataggccagg ccccaggcgc
     3241 ggtagcgctg cagctgcgcc ggcaggcgcg cgaggaagtc gcggaaatcg cgatgttccg
     3301 gcgtgctcca accggtctcg gccaccgcgg ccaggcgcgg gaacaggttg tgctgcaggc
     3361 gtgcatagct gcgcgtgtgc tcggtgaaca tgttggcctg caggcccagg atgtgcccgc
     3421 gcttgtcggc agccagttcg gccggcaccg gctcgaagtt gtacagcttg ccaaggttga
     3481 cctgggccgg gcggcccggc ggttcattcg gcgatgcggt ctgcaggtag tccaggtaca
     3541 ggtagccgac cggcgacatg atcacgtcat ggccggcgct ggccgcggcc aggccgcctt
     3601 cggtgccctg ccacgacata accgtggcct gcggcggcaa gcccccttcg aggatctcgt
     3661 cccagccgat caggcgccgg tcgtgttcct ccaggaacgt ctccaggcgc ttgatgacgt
     3721 ggctctgcat ggccatctca ttgttgatgc ccaacgcacg catgcgctgc tgcacctgct
     3781 tggaggcttc ccactggtcc tttaccgcct cgtcgccacc cacgtgcacg tacttggccg
     3841 ggaacagtgc gatcacttct tccagcacgt tctccaggaa ggtgaccgtg ctgtcctcca
     3901 cgttgaacag gttcgggaac acgccccact cgctgatcgg cttcagcggg gtgctgatcg
     3961 agcccagttc cgggtaggcc gcgatggcgg cggtggcgtg gccgggcacg tcgatttccg
     4021 gaatgacttg gatatgcagc gcggctgcat aggcgatcac ttcgcggatc tgctcctggg
     4081 tgtagaagcc gcagtatgga tgctcctggc cactgaccgg gtcgatgccg ccgtcaccgg
     4141 ccggcaggcg gcagctgccc acctcggtca gcttcgggta gcgcttgatc tccatgcgcc
     4201 agccctggtc gtcggtcagg tgccagtgga aggtgttgag cttgtgcgcg gccatcgcgt
     4261 cgagcacgcg cttgatctcg tccaggctct ggaaatgccg cgccgagtcg agcatgaagc
     4321 cgcgccagct gaagcgcggc gcatcttgga tctgcaccgc tggcagcacg ccgttgctgc
     4381 cgccggtggc gagctgggcg agggtggttg cgccatagaa caggccggtc tcgttgccgg
     4441 cctggatcac cacgccctgc gcggtgctgt ccagcgtgta accctcaccg ctgtcgcgga
     4501 aggtgggcac gatctggaaa cggatgctgc cggccttgcc tgctgccttg cccttggcca
     4561 gggccaggcg cgggccacca ctgcgggcca gcaggtcggc aaactgggtg gcgacgcgtt
     4621 gcgcggcttc gccttcggcg tacagcacgg tatcggcacg gacagtgatg ccgctgccct
     4681 ggccacgctg cacgttggac ggcgcgggaa tcagcatcag gttgccggcg cgcagctgcg
     4741 ggccgggcgc ttctgcggcg ggcgtgggat cggcggcgag tgccggcatc gccggcagca
     4801 gggcgagcag gctgcccagc agcactgcgc tgcgcatccg ggcgcgggaa ggcttgacca
     4861 tcgggacgac tccttggaac ggtgcgatga acgctataca tgaaaaacgc cgggcccgga
     4921 atgacccagg cccggcgtgc gtgcacgact cggcgatgtt gccgccgctg gatcagtact
     4981 tgaagcggaa gttgaggtag tactgacgac cgttttcata gaacgcgctc gggatcgagg
     5041 cgctctggta gtacttcagg gtcgggttgt tgaggttcag tgcatcgaag ctcacgctca
     5101 tccagtcggt ggccttgtag ctcagcgaca gcgacagggt gccgaaatca tcctggtagt
     5161 acgggcttgc gcccttcagg ccgatcagga acgaggaacg gtaggtgtag ctgacgcgcg
     5221 caccgaaggt gtcgttctcg aagtaggcgc ccacgttgta ggtgttcttc gaggtgccca
     5281 gcaggttgtt gctgccgtct tcccaggtat gcgaggtgct gccatcggcg taggtgtagt
     5341 tggcgttcag gccgaagttc tcgcccagcg gctgttcgta ggcgaactcc atgccataga
     5401 ccttgccgtc ggcgttgacc ggcaccgcga cctggtaggc ctccagctgg ttgctcagct
     5461 cgctgtacag catctgggtc tgggtgccga aggccacgta gtccttcagg ttcatcgagt
     5521 acgcacccag cgacaccagg ccgcgcggca tgaagtacca ctccagattg gcatcgaagt
     5581 tggtcgacag caccggcttc agcttcgggt tgccgccacc gccgaccttg gtcaggtccg
     5641 aaccccacga cgatgcgccc agtgccgaga agtccggcag ggtctgggtc tgcgacgcgg
     5701 cgaagcggaa caccaggtca tcggccagat cgaacttcag gttcgcgctg ggcaggatgc
     5761 ggtcgtgctt gttctcgaac gacagcgact tccacttgcc aaacaggctg ctgacgtcgg
     5821 cgttggcgag gtcgcttacc gcctggtagg tgtcgatgtc ctgcttgatg ttgacgtagc
     5881 gcaggccgac attgccgctc cagcggtcgc cgctgaagtt ggcctgcaca tagccggcga
     5941 agttcttctc ggcgaccttc cactcggcgc cgtagttgtg gcgaccggtc gggccgtcat
     6001 tgccggccag ccaggtggag ttgttgagca ccgcgtcctt cagcgcaccc ggggtgtagt
     6061 accagatgtt gcgcgggaag ttgccgccga tgccgccagc gaatccgccc gggaagctgc
     6121 cggtcggagc gcccttcagt gcgtcccaga tcgcgcccgg ggtggcgcct tccggcgaca
     6181 gcgcttcgcg cttgtggtcg gcatagcgca cgccgaagtc gagcgagttc agcgcgccgc
     6241 catcgttgaa gtactggttg aagtcggcgg tgaaccactt ttccttgtct tcggcagtca
     6301 cttcctggtt gccccaggta ccgaaactgg tcacgccgtt cgggctgatg tcgccgccca
     6361 cgttccagtc caccggcgag ccgttgccgt gggtagtcca gttggcgccg ccgccgtcgg
     6421 ccacggtcac ttccgcgatg aactggcgcg gggtggtgcc ggtgcccttg gtgctgccgg
     6481 cctggaactt ggcattgagg ctgtcgttga tctgccagtc ggcgtcgagg gtgatgtagt
     6541 tgctcttggc ggtggcctcg cggtagatca tgtcgtacac cgcgtacggc gtgccggcga
     6601 cgcctgcgaa gttggcgttg gtcagcacgc catccttgac cacatagccc ggcagcggcg
     6661 cctggcccgg acgggtgatc acgccggcgt cgttcttgtc gtcgcccatg atcttgctgc
     6721 cccacaacat gaagttgcgg ttgtagttgt tggcttccat cttcgagctg aagccttcca
     6781 ggcccagggt cagattgtcg gccggcttga actgcagcga gatcaggcca cccttgcgct
     6841 cgcgggtctg ttcgaacagg gtcgagccca gcagcgcagg cgcatagacg ccggccaggt
     6901 ccgggttgga cttggcgaca gagccgttcg ggtcgatctt gaagaagccc gaggggattt
     6961 cctgcgcttc acggcgcagc tcgcgcttct ggctgaagcc ctgcaccatc acgccgaagg
     7021 tgccgtcgtc gttcttgtag ttgaacaggc ccgacagctg cgggtcattc gacttggcct
     7081 ggtccgaacg caccgcgccg atcgaagctt cagcagtgat ctgcttggag aactccagcg
     7141 gcttgcgggt gaggatgttg acggtaccgg tggtgccgcc atcctgcagc ttggcctgcg
     7201 aggacttgtt cacttccacc gagcgcacca gttccgacgg cagcagggtg tagctgacgc
     7261 tgcggccgac gttgctgccc tggctgagca cgaaccagtc ggccgagccg acgctgtggc
     7321 cgttgatcag ggtctgggtc aggctcgggc tggtgccacg caggctgaca cggtcggctt
     7381 cgtcgaagcc gccttcgtcg gcgctggacg agctgatgtt gacgccgggc aggcgctgca
     7441 gggtatcggc gacgttgtgc gccggcagct tgccgacgtc ttcggcggtg accacttcca
     7501 cgcgcgcatt ggcttcgcgc ttggagtcga gcgacttttc catcgaacca cggataccgg
     7561 tgaccgtcac ggtgtccagg tcggtggcgg tctgggcggc ctgctgcgcg tgcgcactga
     7621 aggcgatgca gctgacgatg gcggccgaaa gcagggtctt gcgggtgttc atgatgtctc
     7681 tcctcatcac tcgattggat gccggcggcg gtgttcgatt acggttgcga agacatgcgc
     7741 ggggtggcgg cgaagtcccg tgcgttggcg tgccacgtac tgcgtgctgc gattgcgttg
     7801 aagcctgttg cggtgtcagg cggccgactg ctgcaggtac cagctggcag cgccgaccac
     7861 gcccagctgg ccgtgctcga cgaccttcac cgggatgcgt gccagtgctt cgcccatcgg
     7921 ccccttctgc aggtagcgtt cgacgaaggt gctggcgtgc aggtattcgc ggatctgcgg
     7981 caggatgccg ccggccaggt agacgccacc atgggcgccg tagaacagcg ccatgtcgcc
     8041 gatggtgctg ccgagcaggc cgcagaacac atccagcgcc tggcgtgcgt gcgcatcggt
     8101 atcggccatg gcggcggctg tgactgcatc cgggctggcc agcgtcggtg cctgcccctg
     8161 cagcgcacat accgcgcggt acaggttcat caggcccggg ccggagatcg catgctcgat
     8221 cgacacgtgg gcgcggtcgc gctgcatgtg gcggacgatg gccatttcca gttcggtgct
     8281 ggcggccagg gtcggctggc cggcttccgt cggcagcacc accgggccgt gtgcggtggg
     8341 aatccacagc gcggcgccga ggccggtgcc cgggccgacc accagggtgg ggccgcgtgc
     8401 agcggtctcc ggtccgcaca ggtgcagcac gccgctggcg tccacctgcg cggccgcgta
     8461 ggccaccgct tcaaagtcgt tgacgatgta gacccgctgc aggccgacgt cggcttccac
     8521 ctggcgcgcc gacagcggcc agggcaggtt ggcggtgatc accgtgccgt cctcgcgggc
     8581 atagccggcg ctggcaacca cgcaatgcgt gggtcgcggg ccttcgccga ggaagtcgga
     8641 gaggatcgcg ctgaggccgg catggtcggc attgcggtac ttgcggtatt ccagcacctg
     8701 caccgggtgg gcggtatcac cactggcctg gacccgggcc acgcgcacat gggtgccacc
     8761 gacgtcggcg gccaggaacg aaggcgcgac tcgggacagg acatgggccg gggcggggtg
     8821 gctggcggtc acgcgggctc ctgctgcagg tggggccggc cccgggatcg ggggcggcga
     8881 ttggggcgga gtctgtaacc ccgctgacaa cgatgtcaac gagttcgtga cactttcgtt
     8941 gctgcgccgc aacgaatacg acatgcagta aacgtttaca tggcgtgagc atgggtttca
     9001 cacgggaacc gttgctgcat ggggctcaag ggctgcagcg cattcagccc gatctaccag
     9061 aatcggcttg cgcagtgcag cacgaggttt gcggggcgat gcagggaagt tgacaaaccg
     9121 ccgttgtcca tcgaaagaat gtgacaacgt tgttcccagc cactctccga cgccgcgttc
     9181 tgcggccgtc gccgcaggag ccctcctgat gtccgccgtc cccgctgcaa gcgcgcgccc
     9241 gaacgtggcc acctccatcg ccatcgtcgg cgtgttgttc ttcctgatcg gtttcttcac
     9301 ctggctcaac gggcccctga tcaccttcgt caagctcgcc ttcgaactca gcgaggtcgg
     9361 cgccttcctg gtgctgatgg tgttctacct gtcctacttc ttcctggccc tgccgtcgtc
     9421 gtggatcctg cgccgcaccg gcatgaagaa gggcctgagc ctgagcctgc tggtgatggc
     9481 cgggggtgcc gcgctgttcg gtgaattcgc cacccagcgc tggtacccgg gcgcgctcgg
     9541 cggcctgttc gtgatcggca gcggcctggc cctgctgcag accgcgatca acccctacat
     9601 ctccatcctc ggcccgatcg agaccgcggc gcggcgcatc gcgctgatgg gcatctgcaa
     9661 caagatcgcc ggcatgctgg cgccggtgct gatcggtacc gtggtgctgc acggcatcgg
     9721 tgacctgtcg gccagcgtgg ccgttgccga tgaagcgacc aaggcgcagc tgctcaacga
     9781 tttcgctgcc aagatccacg cgccgtacct ggccatggcc ggtctgctgg tgctgctggc
     9841 ggtggccgtg ctgttctcgc cgctgccgga aatcaagtcc gccgaagcca acgccactcc
     9901 caccaccgcc ggtgccgccg agcgccgcag catcttccag ttcccgcacc tgtggctggg
     9961 cgtgctgtgc ctgttcgtgt acgtgggcgt ggaggtgatg gccggcgatg cgatcggtac
    10021 ctatggccac ggcttcgacc tgccgctgga ccagaccaag atgttcacct cgctgaccct
    10081 gtttgccatg ctcatcggct acgtggtcgg cctgctgctg atcccgaagg tggtctcgca
    10141 gtcgcgctac ctgaccattt ccgccgtgct gggcgtggtg ttctgcctcg gcgcctgggt
    10201 cacccacggc tacgtctcgg tgggcttcgt ggccgcactg ggctttgcca acgcgatgat
    10261 gtggccggcg atcttcccgc tggcgatccg tggcctgggc cgcttcaccg aaaccgggtc
    10321 ggcgctgctg gtgatgggca tcgccggcgg cgcgatcatt ccccagctgt tcgccgtgct
    10381 caagcagcac atcgacttcc agctggtgtt cgtgctgctg atggtgccgt gctacctgta
    10441 catcctgttc tactcggtga tcggccatcg cgccggcctg ccgcaggaca aggcctgatc
    10501 ggcgatgatg gacggcagcc aaccccaggg aaaacccatg cgcagagcga ccatcaagga
    10561 cgttgcggaa aaggccaagg tctcgctgaa gacggtctcg cgggtgatca acaacgagcc
    10621 ctcggtgatg caggccaccc gtgcgcgggt gctgcgtgcc atcgccgagc tcgactacga
    10681 gcccgacccg tccgcgcgca acctgcgcag cggcaccacc ttcgtgatcg ggctggtcta
    10741 cgacaacccg aacccgtacc acatcatcgg cgtgcagaac ggcgtgctcg ctgcctgccg
    10801 cgagaccggg tttggcctgc agatccatcc ctgcgattcc agctcgccgc tgctggccga
    10861 tgagctggcc gactgggtgc agcgttcgcg cctggccggg ctggtgctga ccgcaccgat
    10921 gtccgagcgc cgcgacctga tccaggcgct gaccgcgcgg catcaagctg gtgcgcatca
    10981 tcgccgccac cgaagacccg gccgacggcg cctgcgtgtt cgtcgacgac cgcgaggccg
    11041 cctacgaaat caccgagcac ctgatccagc tgggccacca gcgcatcggc ttcctctggg
    11101 gtggtatctc gcaccgctcc tcgggcgagc gttatgccgg ttacgaggct gcgctgaagg
    11161 actacggcat gaccgtggac aagcacctgg tggtgcaggg tgattacacc ttcgacgacg
    11221 gtttccgcgg cgcgcgccgc ctgctggcgc tgcgcgagcc gcccaccgcc atcttcggct
    11281 ccaacgatga aatcgccgcc ggcgtgctgg cggccgccaa gtcggccggc atgaacgtgc
    11341 cctatgacct gtccatcgcc gggttcgagg acagcccgtt ctcgcgccag tcgtggccgc
    11401 cgctgaccac cgccaagcag gccaccgagg acatcgcccg ccacgccgca cgcctgctga
    11461 tcgcgcagct gcgcagcgac gcctacgacg acgcgccggc accgctgcac aaccagggct
    11521 tcgtgccaca actggtggtg cgcggttcta cggcgccgat gcgcccggcc ggcgcacgcc
    11581 cccttccttc cgatcctgcc tgagcctgcc atgccgctgt cagaccccac ttccaccctg
    11641 atgttcgccg aggccgctga agcagccgac gtggtcgccc gccagttctc gcgcaaccac
    11701 gccaccatgg aaaccctggc cgccagcctg cgcgcggcgc cgccgccgtt cgtggtcacc
    11761 tgcgcgcgtg gcagctccga ccacgccgcc acctacggca agtacctgct ggaaacccag
    11821 ctgggcctgg tggtcgcctc ggcctcgccg tcggtgggct cggtgtatgc cgcaccgctg
    11881 caactgcgtg gcgcactgtt catcgtcatc tcgcagtcgg gcaagagccc ggacctgttg
    11941 cgcaatgcgg aagccgccaa ggcggccggt gcgcgcgtga tcgcgctggt caacgtcgag
    12001 gattcgccgc tggcacaatt ggccgacacg gtcattccgc tgcatgccgg tgcagagaag
    12061 agcgtggcgg ccaccaagag ctacctggct tcgctggcgg cgctgctgca gctggccgcg
    12121 tactggaagc aggacagcaa cctgcgtgcc gcactggacc tgttgcccga tgcgatgcgt
    12181 gcggcctggc agtgcgactg gagcgcggtg accgacggcc tggtcgaagc caccaacctg
    12241 ttcgtgctcg gccgtggcct gggcctgggc gcggcgcagg aagccgcgct gaagttcaag
    12301 gaaacctgca gcctgcatgc cgaggcctac agttcggccg aggtcaagca cggcccgatg
    12361 gcgctggtcg atcgtggctt cccggtgctc gccttcgcgc agccggacga gaccggtgcc
    12421 ggtacccgtg cagtggtcga tgaattcact gcgcgcggtg cacaggtatg gctggccggt
    12481 gctggcggca atctgccggt cgcggccgcg ccgcatccgt tgtgcgcgcc gctgctgacc
    12541 gtgcagagct tctaccgcgc gatcaacgcg ctggcgctgc gccgtggctt caacccggat
    12601 ctgccgccgc acctgaacaa ggttacggag acggtctgat ggccacggtg ctgcgcaacg
    12661 cccgcatcct tgcaggcgat gaattccgcg acgatctggc ggtggtgatc gaggacggcc
    12721 gcatcagtgc gctgctgccc gatgccgcgc cgcagcttgg ccaggccgcc gagcaggtgg
    12781 acctgggagg cggctggctg ctgcccggct tcatcgacgt gcaggtcaac ggcggcggcg
    12841 gtgcgctgtt caacaacacg ccggacgtag catcgctgcg caccatcgcg caggcgcacc
    12901 gccgtttcgg taccaccgcg atgctgccga cgctgatcag cgacgacgtg ggcgtgatgc
    12961 gcgaggccat cggtgcgatg cgcgaggcga tcgcacaggg cgtgccgggc gtgatcggca
    13021 tccatctgga aggcccctac atcgcgcctg cgcgcaaggg cacgcacgat gccagcaagt
    13081 tccgcgtgcc ggacgaggaa gagatcgcac tggccgcatc gctcgacaac ggcgtgaccc
    13141 tgctgacgct ggcgccggaa cgcgtgccgc tggagaccat ccgtgcgctg gtcgagcggg
    13201 gcgtgatcgt cgccgctggg cataccgcag gcacctacga agagatccgc gccggcctgg
    13261 atgccggcgt gcgtggcttc acccatctgt acaacgcaat gtcgccattg cagggccgcg
    13321 agcccggcgc agtgggcgcc gcgctggaag accgcgacag ctggatcggc atcatcgtcg
    13381 atggcgtgca tgtgcatccg gccagcctgc gcgtggccct ggcggccaag ccgcgtggcc
    13441 gcctgctgct ggtgaccgat gcaatgccgc cggtcggtgc cgatgacccg agctatgtgc
    13501 tgtacggcga aaccatcacg gccatcgacg gcgtggtccg caacgccgca ggtgcactgg
    13561 ccggttcggc gctggacatg gccaccgccg tgcgcaacac ggtgcagctg ctcggccagc
    13621 cgctggccga agcggcgcgc atggcctcga cctatccggc gcagttcctc aatgtcgatg
    13681 accgcctcgg ccacatcgca gagggctacc aggccgacct ggtgctgctg gatgacgccc
    13741 tgcaggtgcg cggcacctgg atcgccggac agtacgaggc cgcctgatga acgctacgcc
    13801 gccacgccgg ctgggctcga tcgatgccct gcgcggcatc accgtggcgg cgatgctgct
    13861 ggtcaacaat ccgggtgact ggagcgcggt gttcgcacca ctgcgtcatt cggaatggca
    13921 cggctgcacg cccaccgatc tggtgttccc gttcttcctg ttcctggtcg gtgtgtcgat
    13981 ggccttcagc gtggcaccgc gcgcgctgga cgcgtcggtc cgccctgcgt tggcgcgtgg
    14041 cgtgctggaa cgcgcgctgc gcatcctgct ggccggtgcg ctgttgcatc tgttgatctg
    14101 gtgggcgctg catacgcatc acttccgcat atggggcgtg ctgcaacgca tcgcggtatg
    14161 tgcggcgctg gtgggcgtgc tggcggtgta tgcgcggccg cgcgtgcagg cggccgtgct
    14221 ggtcacgctg ctggtggggt acaccgtact gctgctgggc atcggcgatc tggcgccgtg
    14281 gaccaatccg gccagccgcc tggataccgc gctgttcgcc ccgtggatct accagtggca
    14341 tgccgatacc gggcttggtc atgacccgga aggattgctg agtaccctgg gcgccctggc
    14401 cagcaccgtg ctcggcctgt ttgccggcgg cctgctgcgc aacgggcgtt cggcggccct
    14461 ggccgggctg ggcgtggcaa ccgctgtgct cgggttgctg ctggccaccg tgctgccgtt
    14521 gaacaagcag ctgtggacgc ccagctatgt gctgtggacc ggtggccttg ccgcactggc
    14581 gctgtggctg ggccacgtgc tgatcgaccg caagggttgg ccggcgctgg ggcggcgctt
    14641 tggggtcaat gcgatcactg cctatctggg tgcgtcagtg atgtcggtgg tactgatggc
    14701 caccggcgcc tggggctgga tctggcagca gctggccgat gcgatgccac aggcgctgga
    14761 gctggcgtcg atactgcagg cggtggcatt cgtcgcgctg tggtggggcg tggcctggtg
    14821 gttggaccgg cggaagatct acctgaagat ctgacccgcc tcatccacgc atggcgtgga
    14881 tcgtccggga tgcgcgtgct ggttcagtag atccacgccc tgcgtggatg ctcttctcgc
    14941 tactggtggc ctccagaaaa atgaatggtt tcagtcacgt agaggccagg tgagagtcgc
    15001 tcgagttcgc aattgaagtg tgatcactgg cacgtaaatt cacctgtcga aaccattcac
    15061 gacaaggcag actgcgctcg cagtaccgca tatccgcagt tcctgatccc ctgtccagga
    15121 gtgctgtatg tcccgtgccg tcccgcgcgc gtttcgtccg cgccgcctca ccgtttccgt
    15181 gctgcaggcc ctggccgttc cctccgtcat gctgatgtcc gccagcgtcg cctgggccgg
    15241 ctgtgacgcc attgcgcccg ttgccggcca gacggtcacc tgcactgcca gcgcacccaa
    15301 cccgcagacc gttcccatcg ctgccagcgg cgcggccggc atcaccgtca acgttgccag
    15361 cagcgcgcaa ctgcagcaga gcggtggcgg ttccgccatc tcgctggtcg gcgcaggggg
    15421 ccatctgctg tccaaccagg gcgcgatcag ttcggtcagc ggcgtggcgg tgcagctcgg
    15481 cggcggcagc cgcgtcgaga accttggcag catcagcacg ggcaacaaca tcgccctgca
    15541 gttcgtcggc aatggtgaca gcgtgctggt caaccgcgga acgctcagtg gcggaaccgg
    15601 cgtgcagttc ggtgccggca atgatcgcct ggagatgcag gccggcagca tcaccggcgg
    15661 tgtcctgcag ggcgatggca acgatgtgct gctgctcaac gacggcaccc tcgaccgtgt
    15721 cgaccagggc agcggcgatg accagatgac ggtcaccggc ggcaccatca ccggcgtggt
    15781 cgcacagggc agcggccgcg acgatttcgt catgaccggc ggcaccgtcg gcgccctgca
    15841 gcagggcgac aacatcgaca ccttccgcat gagtggtggc cgcatcatcg gtgccttcga
    15901 agatggcgac cgggcctgga tgaccggtgg ccgcatcggc cgggtcaaca tgaagctcga
    15961 caagaacctg tgggacatgt ccggcggtac cgttgacggc aacgtggtga ccggcttcga
    16021 caccgacacc atcatcattt cgggcacggc ctacatcggc ggcaacatca gcgtcagcgg
    16081 cggtgccgac agcgtgacca tcactggtgg caccgtgcgc ggccaggtgc tgctcagcac
    16141 cggcaatgac acgttcaact ggaccgatgg cggcatcgtc tacggtgcga tcgacatggg
    16201 cccggatgac gacgttgcga acctggccaa cctcacccag acccacgtcg gcgcagtacc
    16261 cctgttcgac ggcggcagcg gcaccgacca gctcaacctc accaacgtca agaccactgg
    16321 cgtcgggcgc ttccagaact gggaaacgat caacctggcc agcagcaccg aactgacctt
    16381 cgacggcgct ctggtgctgg gcgatgccgg caccggcacc ggtacgctca ccgtcgacga
    16441 caccagtacg ctgttcgctg gcggcggcaa ctacgcgatt cgcccgttct cggcatcggg
    16501 cctggtcaac gtggtcaatg ccgggcgcat cgacctgacc gccagcggca gcgccggtga
    16561 tgccttcacc gtgcgcggca attaccgcgg cgacggcggt ggcgtgtacc tgaagacggt
    16621 gctgggggcc gatgattcgg ccagtgacac gctggtgttc gacggcggca cggccaccgg
    16681 cagcaccggc atcggcatcc tcaacgtggg cggcggtggt gcggcgacac gtaccgacgg
    16741 tatcctggtg gtgcaggcat tgaatggcgc caccaccgcg ccgggcgcat tctcgctgtt
    16801 tgcgcccgtg gcggccggtg cctatgagta cttcctgttc aagggcgggg tcagcgcggg
    16861 caccggcgag aactggtacc tgcgctcgac gctggtgcag
//
LOCUS       DAOKIP010000076        16778 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.076,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000076 DAOKIP010000000
VERSION     DAOKIP010000076.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 16778)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16778)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16778
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.076"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            1..654
                     /locus_tag="QEL58_002076"
                     /pseudo
     CDS             1..654
                     /locus_tag="QEL58_002076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008264661.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2345 domain-containing protein"
     gene            899..2518
                     /locus_tag="QEL58_002077"
     CDS             899..2518
                     /locus_tag="QEL58_002077"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676550.1"
                     /translation="MGDSRTDLPNQAPPVTLQQLREALAFISEQYRSAVDGGKNVFAW
                     LWESIQGDFNQERSTGQVVFDTAISMIPGVDQVCDVRDIIANCKQINDDKSNSWAWIA
                     LVLTLIGLIPTLGSLLKGVLKIFFLFIRRFGLNHLVRAVDEAMSWVITLLRRREVAQY
                     WKALRWDRVFHELAKQTRIVRARVTQAQLLKAFDRAVLLMRSLLGKVADIPMVGRRAQ
                     ETIDLVVGIRKIADNYIGKVLAPVQRILDTIIKRLEFEDMVQRRGIVNAGNFHFTGTL
                     PEAHAVTLMRRVDPPPSWLGKGEPTKNLPLVPARLRVRVDEMADKGFPRLTDGQIESF
                     AKGMRADTIKGPAKLYRVVSPANFSAGADWVTEEVFNTIMKSADPRATWRRHLAVWPD
                     WNPNGQFVVYELKAGEELKVWRGPASAQKKDVLPDHHLEGGYEQIKFDAAFEYDAAGK
                     PGKRTLADSSEYYAVNEATGAMTRSSMTYDKWKLLPPHEQVKYVSLRTKINNPRILGP
                     MDTGWGTSDFGTQMNDVKLGLPNISGQKINR"
     gene            2521..3630
                     /locus_tag="QEL58_002078"
     CDS             2521..3630
                     /locus_tag="QEL58_002078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676551.1"
                     /translation="MKIQYLELNPWHKRQAALIHHFTSMEYLKGLLPQIDSLLAMTDQ
                     MLDDRSHLDTAGRALAGWESQDTASHFSTYAYPALMEFRECVVEDIALRSIERYRGAG
                     EHQCSRMLEEYAYQMAWATPEQEKLFRETTERVFRYARQISSIVSRPSTMDDFAYWLL
                     WNESAADTQHIPAFRVRTDICVHTHQTPPRTGIYVAKDDPMASLQFAWTGGYGRLCPA
                     MALNDVGRAVVKQIGREGLWGDTQTIYRFLDENRHLDLYGWSDVQADVAKVAPSVIAG
                     ECFDLQECDWYFVEPIPDAFEDIDGSYIGTDQPDLRPDRVAAGKRAPVAGWWYTPAQG
                     GRRFFKQGDVFPVINSDWGDTFWIWAPDQTPPTMG"
     gene            3688..4782
                     /locus_tag="QEL58_002079"
     CDS             3688..4782
                     /locus_tag="QEL58_002079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008267509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676552.1"
                     /translation="MELTPWHKRQAALIHHFTSMEYLKGLLPQIDSLLAMTDQMLDER
                     SHLDTAGRALAGWESQDTASHFSTYAYPALMEFRECVVEDIALRSIERYRGAGEHQCA
                     RMLEEYAYQMAWATPEQEKLFRETTERVFSYASELSGTVARPPVANDFSFWLLWNKGV
                     IDSHRIPKFRVRTDFVVRTNQVPPRTGIYVAKDDPMASLQFAWTGGYGHLCPAMAPND
                     IGRDVLKQIGRDGMWADTKAFYRFLDANRHLDPYGWSDIQADLVKVAPSVIAGSAFDL
                     KDCDWYFVEPIADEFEEIDGSYTGTDQPDLRPDRVAAGKRVPVAGWWYTPAQGGRRFF
                     KQGDVFPTINSDWGDTFWIWAPDQTPPALG"
     gene            4840..5934
                     /locus_tag="QEL58_002080"
     CDS             4840..5934
                     /locus_tag="QEL58_002080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008267509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676553.1"
                     /translation="MELTPWHKRQAALIHHFTSMDYLKGLLPQIDSLLALTDQMINER
                     SHLDTAGRALAGWSSQNTASHFSTYAFPALMEFREGIVKDIALRSIEQYSVAGEHQCA
                     RMLEEYAYQMAWATPEQEKLFRDTTESVFRYARELSGIVARPPVKNDFSFWLLWNKGV
                     IDSHRIPKFRVRTDFVVRTNQVPPRTGIYVAKDDPIASLQFAWTGGYGHLCPAMAPND
                     VGRAVLRQFGRERLWGDAEGLYRFLDANRHLDPYGWSDIQADLVKVAPSVIAGSAFDL
                     KDCDWYFVEPIADEFEDIDGSYTGTDQPDLRPDRVAAGKRVPVAGWWYTPAQGGRRFF
                     KQGDVFPAINSDWGDTFWIWAADQTPSPVR"
     gene            complement(6028..6456)
                     /locus_tag="QEL58_002081"
     CDS             complement(6028..6456)
                     /locus_tag="QEL58_002081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012512393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676554.1"
                     /translation="MPSATPAMGVGADRPPLPGVDVRLSAVDAAGKGVPVQWQDEKLT
                     LREPPLARSADIADVRAVQDEYGQTALQIRYRPEAHQRIHDGTAAMVGQRMAISLDGR
                     VLMVATVQGPFAESMSLSGLTSSDAEALEKHITGSVPVKR"
     gene            complement(6507..7058)
                     /locus_tag="QEL58_002082"
     CDS             complement(6507..7058)
                     /locus_tag="QEL58_002082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014038840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HdeD family acid-resistance protein"
                     /protein_id="HDS1676555.1"
                     /translation="MNSPLSPLLSAVGRSWWILLLYGLVALGFGIVAIGWPLSAAMAL
                     AWTLGVVAIAEGVISLFALISGGSGASRGWLALYAIASLGFGILAVINPLATASVLVL
                     FLAAWLLVAGIYRIVFAIRVRRQIQGEWLLILSGVLAVVLGLLFVANPYAGVAVTTLW
                     IGIGSLLYGLLQVLVAFKLRKLK"
     gene            complement(7117..7806)
                     /locus_tag="QEL58_002083"
     CDS             complement(7117..7806)
                     /locus_tag="QEL58_002083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010482160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComF family protein"
                     /protein_id="HDS1676556.1"
                     /translation="MSAFFNPVRHVQAALRVLLPLRCLVCGDPGHDGLDLCAACLAEL
                     PWSGRACLRCALPLPDNALIVCGTCREEVPPQAATHASLLYLPPVDQLLVRYKFHQDL
                     AAGRLLAQLMQRAPPPWWCPPLVPVPLHNRRLRQRGYNQAGELCRLLPMPVWQGLYRR
                     RHTAPQSERTAEQRRENLFDAFAIRGPVPTRLTVVDDVMTTGSTVMEVAETLRLVGAA
                     EVRVWVCARVP"
     gene            complement(7903..9072)
                     /locus_tag="QEL58_002084"
     CDS             complement(7903..9072)
                     /locus_tag="QEL58_002084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019336813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HDS1676557.1"
                     /translation="MINCSIRRLAAAVLALASSPALALAGTPVLPSDRSIGIIEPVAR
                     FEGAMPTSVAVSETGRIFVNFPRWGDEVPYSVAEWRDGRAVPYPDARINRKDGPDPAA
                     HFISVQSVVADGQGRLWVLDTAAPGFSAPQAGGAKLVAIDLATNTVARTLVFPANVID
                     ARTYVNDVRFDFRVGREGVAYVTDSSLSGIGGIIVIDLATGAASKRLIGHVSTSADQA
                     FVPIVEGQQMRLRNADGSTQPFTVAADGIALSPDGATLFYTPLSSRHLYSVPTALLRD
                     PKVSEAALAAAVVDLGDKGASDGMEMDANGRLYASDYEHNAIHARDAQGRWTTVVHDP
                     RILWPDTLSMGPDGYLYFTANQLHRQAGFNGGADRRQTPYMVYRTRVDAKPAPTR"
     gene            complement(9265..9765)
                     /locus_tag="QEL58_002085"
     CDS             complement(9265..9765)
                     /locus_tag="QEL58_002085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676558.1"
                     /translation="MFLPQEVLAPLRCYFVTDDGSLPEVELTCCEAAGTADAFAYLFA
                     CGARVAASGSVQLWLGAEDRGQPFMGPGDARRVLQDEVEPFHISLADIACDGVLLPEL
                     GVLVMRHGLTLDYRMGPSWGEREVQAFLLLLHQLQQRGAVMTVPWWGEEGQHRFETAL
                     AAIEMC"
     gene            complement(9789..11159)
                     /locus_tag="QEL58_002086"
     CDS             complement(9789..11159)
                     /locus_tag="QEL58_002086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005414795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chloride channel protein"
                     /protein_id="HDS1676559.1"
                     /translation="MIDLYRLRGRITALVLSEAWRRRAALWGGAVAVALVAILFAKAS
                     DAAFHLFQRITSHSPWWALLLTPGIFALLAWLTSGVLKPTRGSGIPQVIAALDKPDAS
                     FREANLSPAVSAGKLLLTSLSLLGGASVGREGPTVHVGASLMYLFGRWFGFKDPRELS
                     HFLLAGGAAGIAAAFNTPLAGIVFAIEELSGRFEHRFSGTLLTAVIVGGVVSLGLLGN
                     YTYFGHVSARLPLGQGWLAILLCGVVAGLLGGVFARAVLASAAGRPRWLGQLRQRHPV
                     LLAAGCGLVVVLLALVFGEGAFGTGYEQARSLVQGQALVGHEFGLMKLLANLASYVAG
                     IPGGLFSPALAVGAGLGHNLAVLMPGVDPRAFVLLGMCAYLTGVTQAPLTSAVISLEL
                     TDSGDLLLPILATVLIARGVSGLVCRVPIYRGLAELLMVPKTVGDVAVEAPAVRSSHS
                     RENGDE"
     gene            complement(11302..11619)
                     /locus_tag="QEL58_002087"
     CDS             complement(11302..11619)
                     /locus_tag="QEL58_002087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676560.1"
                     /translation="MDSLDSWLPITREELEALIARQLQDCSPGHRAIFETLRVPLRAM
                     PLHRLGTIESVWVVAQLPGGLLYYEDVEEGFEVGAPGEDGVLPDRGCSQLALTHVLHR
                     LAI"
     gene            11820..12863
                     /gene="bioB"
                     /locus_tag="QEL58_002088"
     CDS             11820..12863
                     /gene="bioB"
                     /locus_tag="QEL58_002088"
                     /EC_number="2.8.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010482168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin synthase BioB"
                     /protein_id="HDS1676561.1"
                     /translation="MAAAIRHDWQHDELQALFDLPFPELLFRAAAVHRDHFDPSQVQV
                     STLLSVKTGGCPEDCAYCPQAQRYSTGVNAQKLMDTDAVLAKARQAKAAGASRFCMGA
                     AWRSPKDRDIPKVAAMIAGVKALGLETCATLGMLSGEQARALKDAGLDYYNHNLDTAP
                     DYYDSIIHTRQYQDRLDTLEHVRDAGLKTCCGGIVGMGETRAQRVGLLLALATLPAHP
                     DSVPINKLVQVAGTPLHGSAELDPFEFVRMIAVARIAMPRSMVRLSAGREAMSDELQA
                     LCFIAGANSIFYGDKLLTTGNPESERDLALFARLGLQPMAVQVDAEGHDHGGTVHADI
                     SADAPGCGCAHAA"
     gene            12931..14154
                     /gene="bioF"
                     /locus_tag="QEL58_002089"
     CDS             12931..14154
                     /gene="bioF"
                     /locus_tag="QEL58_002089"
                     /EC_number="2.3.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005411516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="8-amino-7-oxononanoate synthase"
                     /protein_id="HDS1676562.1"
                     /translation="MARPDLTARLHAQRALRDAQGRRRPRRTVSRRDGVRLEVDGQWL
                     TGFCSNDYLGLAQQFSVVNALQDAAAREGAGAGASHLVCGHHAMHDALEREVADWLGY
                     PRALLFGSGFAANLAVQQALLSEENDVCVQDKLNHASLLDATRLAGARLRRYPHLDAE
                     GAMRQLKHTPDGAAMLATDGVFSMDGDIAPLRALSLVARLQQALFYVDDAHGVGVVGD
                     GRGAVAAAGLGLDDVPLQLVTLGKALGGSGALVLGRDDLIEHLAETARPYIYTTAVPP
                     AMAAAALEAVRLARRDHWRRSKLADLIALFRSEARRHGLDLMASETPIQPLLCGDDHS
                     AVAMSRALEQAGWLVGAIRPPTVPEGKARLRVTLSALHSPDQVRGLVDAIASARDLVA
                     LSARESAPPPLPAFA"
     gene            14172..14951
                     /gene="bioH"
                     /locus_tag="QEL58_002090"
     CDS             14172..14951
                     /gene="bioH"
                     /locus_tag="QEL58_002090"
                     /EC_number="3.1.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005420129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pimeloyl-ACP methyl ester esterase BioH"
                     /protein_id="HDS1676563.1"
                     /translation="MHIEVTGRGPDLVLIHGWALQGGVFAPLVQRLADRFTLHRVDLP
                     GHGHSRDDTTPLRLPFVVNAIAAATPPAVWCGWSLGGLFALHAAATLPKVRGLAMIAA
                     TPRFVRGEDWPHAVEPTVFEQFGRELATDFGGTLERFLALDVMGSAHAREELRTLRQR
                     LVERGAPTERALLEGLRLLENTDLRGALPALGKPSLWIAGQRDRLVSPAAMQAAAALA
                     PQSQALTVAHGGHAPFLGHADEVAAALQHFVAGLSPADGGQ"
     gene            14981..15760
                     /locus_tag="QEL58_002091"
     CDS             14981..15760
                     /locus_tag="QEL58_002091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014509285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HDS1676564.1"
                     /translation="MDLGINGRWALVCGASKGLGLGCARALVREGVNVVIVARGEAAL
                     QHAAEELRALPGAADVRAVAADVTTEAGRAAALAACPQVDILVTNAGGPPPGDFRSFE
                     RDDWIAALDANMLAPIALIRATVDAMIDRGFGRIVNITSSAVKAPIDILALSNGARSG
                     LTGFVAGLSRRTVAHNVTINNLLPGQFDTDRLRANFAHSAGKDGDAGEVAERRRQQIP
                     AGRFGTPDEFGAACAFLCSAQAGYLTGQNLLIDGGAYPGTF"
     gene            15773..16657
                     /gene="bioC"
                     /locus_tag="QEL58_002092"
     CDS             15773..16657
                     /gene="bioC"
                     /locus_tag="QEL58_002092"
                     /EC_number="2.1.1.197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005411519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malonyl-ACP O-methyltransferase BioC"
                     /protein_id="HDS1676565.1"
                     /translation="MPSHFDARHVRRAFARAANSYDAAAALQREVQSRLIESLDYLEA
                     RKPEVVLDIGAGTGHASALMKKRWPKAQVIALDVALPMLDQAKRQAGWWKPFQRLCGD
                     AAALPLADNSVDVIFSNLCLQWVDDLPAVFAGFRRVLKPGGLLLCSTFGPETLVELNE
                     AFAAADDRPHVSRFAQIAQFGDALMMAGFRDPVLDRDVFTLTYDDLPSLMRELRAMGA
                     TNARTDRRHTLTGRGRFAAAAAAYEPMRRADGKLPSSWEVIYAHAWAPDPGAPIREGG
                     HDVASVPVSAIPIRRKQT"
BASE COUNT         3149 a         5598 c         5298 g         2733 t
ORIGIN      
        1 cagaccctgg ccgagcagca ggtgccgggc ctggccgagt accagcgcac ccggcagctg
       61 cgcgagcaga tcgacccgaa ggcgcagggc cgctacaccg gcgacgtgaa cgggcagagc
      121 gcgatgaagc ccggcagcga cggccgcagc cccggcgagc agccggtgga acggctgggc
      181 acgccgctgc tggtggccga agcgccgcac cacgtggcct ggaccaccgc ggccagcgcc
      241 gtggcctatg ccgggcagaa cctgcagatg accgtgcagc aggacctgca cgtcagcgcc
      301 ggcgagaccc tcgccaccgt gtccggcgag cacgtctcgc tgttcgcgca gagcggcccg
      361 ctgcgggtga tcgccgcgca ggggccggtc agcctgcagg ccaacgatgg cgagctggag
      421 ctgctgagcg agcaggcgct gaccatcacc gccaccgacg agcgcatcga cgtgctggcg
      481 cagaccaagg tggtgctgca ggcgggcagc agtgcgatca cgctggaggg cggcaacatc
      541 accttcagct gcccgggcga gttcaaggtc aaggcgggcg agcatccgtt catgggcggg
      601 gagcacgctg tgccgttcat ccctccgctt cctggagggc ttcagcgcat tcccgactgg
      661 atcgcgttgg actaccgcga tgtggaaaca caacaggcca tggcaggcac tccttacgag
      721 atccacttca ggaacggccc ggtcatcaag ggaaagctgg atgttgccgg gaaggcccac
      781 catcagccca tcccgaagca ggaggtagag aaggtcgtct atgaaccccg cagcgctgat
      841 acggaagaca actggcccga cctcgagctg atcgccaacc ctcaacaggg tgcgggccgt
      901 gggtgattcg cgcaccgatc tccccaatca ggcacccccc gtcaccctgc agcagcttcg
      961 cgaagcgctc gccttcatca gcgagcagta caggagtgct gtcgacggcg gcaagaacgt
     1021 cttcgcatgg ctgtgggagt cgatccaggg ggacttcaac caggagcgca gcaccgggca
     1081 ggtcgtattc gacaccgcca tttcaatgat ccccggcgtg gaccaggtct gcgacgtccg
     1141 agacatcatt gccaactgca agcagatcaa cgacgacaag agcaattcct gggcctggat
     1201 cgcgctggtc ctgaccctga tcggcctgat ccccacgctg ggctcgctgt tgaagggtgt
     1261 attgaagatc ttcttcctct tcatccgccg cttcggcttg aaccatcttg tgcgcgctgt
     1321 ggatgaggcc atgagctggg tcatcacgct cctgcgccga cgtgaggtcg cccaatactg
     1381 gaaagcgctg cgctgggacc gcgtgttcca tgagctggcg aagcagaccc gcatcgtgcg
     1441 tgcacgggtg actcaggcac agctgttgaa agccttcgat cgcgccgtgc tgctgatgcg
     1501 tagcctgctg ggcaaggtgg ccgacatccc gatggtgggg cgccgtgccc aggagaccat
     1561 cgatctggtc gttggcatcc ggaagatcgc agacaactac atcggaaaag tactggcgcc
     1621 cgtacagcgc atccttgata cgatcatcaa gcgccttgaa ttcgaagaca tggtgcagcg
     1681 gcgcggcatc gtcaacgccg gcaatttcca tttcaccgga acgctgcccg aggcacatgc
     1741 cgtgacgttg atgcggcggg ttgatccgcc gccttcgtgg cttggcaagg gagagccaac
     1801 gaagaacttg ccgttggttc cagcgaggtt gcgtgtacgt gtagacgaaa tggcggataa
     1861 gggcttccca agactgaccg atggccagat cgaaagtttc gccaaaggca tgcgcgccga
     1921 tacgatcaag ggtcctgcaa agctgtatcg cgtggtctca ccggcgaact tcagtgccgg
     1981 cgcggattgg gttaccgaag aagtcttcaa tacgatcatg aagtcagccg acccgagggc
     2041 cacctggcga aggcatctgg ccgtctggcc tgactggaac cccaatggac agttcgtcgt
     2101 ctatgagctc aaggcaggag aagaactgaa ggtgtggcgc ggcccggcat ctgcccagaa
     2161 gaaagacgtt ctgccggatc accaccttga aggcggctac gaacagatca agttcgacgc
     2221 cgcatttgaa tacgacgctg ccggcaagcc gggaaagagg acgttggccg atagttctga
     2281 gtactacgcc gtcaatgaag caaccggtgc catgaccagg agcagcatga cctatgacaa
     2341 atggaagctg cttcctccgc atgagcaggt gaaatacgtc agcctgcgga ccaagatcaa
     2401 caacccccgc attctcggcc cgatggacac cggctggggg acaagcgact ttggtactca
     2461 aatgaatgat gtaaagctgg gtctaccgaa catctccggc cagaaaatta accgctgacc
     2521 atgaaaattc aatatctgga actgaatccg tggcacaagc gccaagccgc cctcatccat
     2581 catttcacct cgatggagta cctgaagggc ctgctgccgc agatcgacag cctgctagcc
     2641 atgaccgacc agatgcttga tgaccgctcg catctggata cagctggcag agccttggcg
     2701 ggttgggaat cacaagatac ggcatcgcat ttttcgacgt atgcctatcc tgcactgatg
     2761 gagttccggg aatgtgtggt tgaagacata gctctacgct caatcgagcg gtatcgagga
     2821 gcaggcgagc accaatgttc tcgcatgctg gaggagtacg cctaccaaat ggcctgggcg
     2881 acgccggagc aggaaaaact gttccgcgag accacagaaa gagtgttcag gtatgcccga
     2941 caaatctcga gcatcgtttc tcgcccttcg accatggacg atttcgcata ctggctactc
     3001 tggaacgaga gtgccgcaga cacgcaacat attcccgcat ttcgtgttcg aacagatatc
     3061 tgcgtgcaca ctcaccagac tcccccgcgc actggcatct acgtcgccaa agacgacccc
     3121 atggcttcac ttcagtttgc atggaccggt ggatacggac gactttgccc agccatggcg
     3181 ctcaatgatg ttggacgagc tgttgtgaaa cagattggtc gagaaggact atggggagat
     3241 acccaaacca tctatcgctt cctcgatgaa aaccgccact tggatctcta tggctggtcc
     3301 gacgttcagg ccgacgtagc gaaggtagca ccgtcagtga tcgccgggga gtgcttcgat
     3361 ctgcaggaat gcgactggta ctttgtcgaa ccgatccccg acgcattcga agatatcgac
     3421 ggcagctaca tcggcacgga tcagccggat ctccgaccgg accgagtcgc agcaggaaag
     3481 cgcgcgcctg tggccggctg gtggtacacc cccgcgcaag gtggccggcg cttcttcaag
     3541 caaggcgatg tgttccccgt catcaacagc gactggggtg acaccttctg gatctgggcg
     3601 ccagaccaga cgccgcctac gatgggttga cgagcacttc atggccttcc ctttccggag
     3661 ttgcactatc agaagcgtgc ccgccccatg gagttgacgc cgtggcacaa gcgccaagcc
     3721 gccctcatcc atcatttcac ctcgatggag tacctgaagg gcctgctgcc gcagatcgac
     3781 agcctgctag ccatgaccga ccagatgctt gatgagcgct cgcatctgga tacagctggc
     3841 agagccttgg cgggttggga atcacaagat acggcatcgc atttttcgac gtatgcctat
     3901 cctgcactga tggagttccg ggaatgtgtg gttgaagaca tagctctgcg ctcaatcgag
     3961 cggtatcgag gagcaggtga acaccaatgt gctcgcatgc tggaggagta cgcctatcag
     4021 atggcctggg cgacgccgga gcaggaaaaa ctgttccgcg agaccacaga acgagtattc
     4081 agttatgcga gtgagctttc cgggacagtc gcacgccctc ctgtcgcgaa tgacttctca
     4141 ttctggctgc tctggaacaa gggtgtgatc gactcacatc gaatcccaaa attccgtgtt
     4201 cgtacagatt ttgtagtgcg aaccaatcag gttcccccgc gcactggcat ctacgtcgcc
     4261 aaagacgacc ccatggcttc acttcagttt gcatggaccg gtgggtacgg acacctttgc
     4321 ccagccatgg cccccaatga tattggacga gacgttctga agcagatcgg tcgagacgga
     4381 atgtgggcgg ataccaaagc cttctatcgt ttcctcgatg caaaccggca tctggatccc
     4441 tatggatggt cagacattca ggccgatctg gtgaaggtgg ctccgtcagt gatcgccggt
     4501 tcggccttcg atctgaagga ttgcgactgg tattttgtcg aacccatcgc cgatgaattc
     4561 gaggaaatcg acggcagcta caccggcacc gatcagccgg atctccgacc ggaccgagtc
     4621 gccgccggca agcgggtgcc tgtggccggc tggtggtaca cgcccgcgca aggtggtcgg
     4681 cgcttcttca agcaaggcga tgtgttcccc accatcaaca gcgactgggg tgacaccttc
     4741 tggatctggg cgccagacca gacgccgccg gcattgggtt gaagagcatt tcatgacctg
     4801 ccctttccgg agttgcacca tcagaagcat gcccgcccca tggaattgac gccctggcac
     4861 aagcgccaag ccgccctcat ccatcatttc acctcgatgg attatctgaa gggattgttg
     4921 ccgcagatcg acagcctgct cgcgctgacc gaccagatga tcaatgagcg atcgcatctg
     4981 gatacggcgg gcagagcctt ggcaggttgg agctcccaga atacggcctc gcacttctca
     5041 acctacgcct ttccggcgct catggagttt cgtgaaggca tcgtcaagga catagcactg
     5101 cgctcaatcg agcaatacag tgtcgcaggc gagcaccaat gtgctcgcat gctggaggag
     5161 tacgcctacc agatggcctg ggcgacgccg gagcaggaaa agctgttccg tgacaccacc
     5221 gaaagcgtct tcagatatgc acgggagctc tccggcatag tcgcacgccc ccccgtcaag
     5281 aatgacttct cattctggct gctctggaac aagggcgtga tcgactcaca tcgaatccca
     5341 aaattccgtg tccgcacaga ttttgtcgtg cgaaccaatc aggttcctcc gcgcactggt
     5401 atctacgttg ccaaagatga ccccatagct tcacttcagt ttgcatggac tggtgggtac
     5461 ggacaccttt gcccagccat ggcccccaat gatgttggac gagccgtact gcggcagttc
     5521 ggtcgagagc gactgtgggg cgatgcagaa ggcctgtatc gcttcctcga tgcaaaccgg
     5581 catctggatc cctatggatg gtcagacatt caggccgatc tggtgaaggt ggctccgtca
     5641 gtgatcgccg gttcggcctt cgatctgaag gactgcgact ggtattttgt cgaacccatt
     5701 gccgatgaat tcgaggacat cgacggcagc tacaccggca ccgatcagcc ggatctccgg
     5761 ccggaccgag tcgccgccgg caagcgggtg cctgtggccg gctggtggta cacccccgcg
     5821 caaggtggcc ggcgcttctt caagcaaggc gatgtgttcc ccgccatcaa cagcgactgg
     5881 ggtgacacct tctggatctg ggccgcagac cagacgccgt cgccagtacg ctgagcccat
     5941 cgctggatga gggttgcatc aagagcggcc cttccccaag gcagcacgct ctcccacacg
     6001 cacggcgcat gaacgcactg cccactccta ccgcttcacc ggcacagacc cggtgatgtg
     6061 tttctccagt gcctcggcat cactactggt caatccactc aggctcatcg attccgcaaa
     6121 cggtccctgc accgtcgcca ccatcaggac ccggccatcc aggctgatcg ccatgcgctg
     6181 gccgaccatc gccgctgtgc catcgtggat gcgctggtgc gcctcgggcc gatagcggat
     6241 ctgcagcgcc gtctggccgt actcatcctg cacggcgcgc acgtcagcga tgtccgcact
     6301 gcgggcaagt ggaggctcgc gcagcgtcag cttctcgtcc tgccactgta ccggcacgcc
     6361 cttgccggcc gcatcgaccg cgctcaggcg cacatccacg ccgggcagtg gcgggcggtc
     6421 cgctcccacc cccatggcgg gcgtggcgct gggcatgcaa ccggccaggg ccgtcgccgc
     6481 ccccaacacc agcgcaagca gagctctcac ttcagcttcc gcagcttgaa cgccaccagc
     6541 acctgcagca gcccgtacag caggctgccg atgccgatcc acagcgtggt caccgccacg
     6601 cctgcatagg ggttggccac gaacaacagg cccagcacca cggccagcac gccactgagg
     6661 atcagcagcc attcgccctg gatctgcctg cgcacgcgga tcgcgaacac gatgcgatag
     6721 atgccggcca ccaacagcca cgccgccagg aacagcacca gcacgctggc ggtggccagc
     6781 gggttgatca ccgccaggat gccgaagccc agcgaagcta tggcatacag cgccagccag
     6841 ccgcgggaag caccactgcc accgctgatc agtgcgaaca ggctgatgac gccctcagcg
     6901 atggcgacta cacccagcgt ccacgccagt gccatcgccg ccgacagcgg ccagccgatg
     6961 gcgacaatgc cgaagcccag cgcgaccagc ccatacaaca gcaggatcca ccagctacgg
     7021 ccgaccgccg acaacaaggg agacaggggg gaattcatgg ccactccttc gatccggaac
     7081 cgggctcatc ctagcccctg tcgatgaagg gagcgatcac ggcacccgcg cgcataccca
     7141 cacgcgcacc tccgcagcgc cgaccaggcg cagcgtctcg gcgacctcca tcaccgtgct
     7201 gccggtggtc atcacgtcat cgaccacggt cagccgcgtg ggcaccggac cacggatagc
     7261 aaacgcatcg aacagatttt ccctgcgttg ttcggccgtg cgttcggact gcggtgcggt
     7321 gtggcggcgc cggtacagcc cttgccagac cggcatcggc agcaaccggc atagctcgcc
     7381 cgcctggttg tagccgcgct ggcgcaaccg gcgattgtgc aacggaaccg gcaccagtgg
     7441 cggacaccac cagggcggcg gcgcgcgctg catcagttgc gcgagcaggc gtccggctgc
     7501 gagatcctga tgaaatttgt agcgcaccag cagctgatcc acaggcggca ggtacagcag
     7561 gctggcatgc gtggcggcct gtggcggtac ctcctcgcgg caggttccgc agacgatcaa
     7621 cgcgttgtcg ggcagcggca atgcgcagcg caggcaggcg cggccggacc acggaagttc
     7681 ggccaggcat gcagcgcaga ggtccagccc atcgtggccc gggtcaccgc agaccaggca
     7741 gcggagcggt agcagcacac gaagtgcagc ctgcacgtgg cggactgggt tgaagaaggc
     7801 agacatgcac ttcagcatgt cgccgccgtc agcgcgttgc catcgggggc gccctcaacg
     7861 acccgtaggc attttcatcg cccacattct gccccgatca cttcaccgcg ttggcgcagg
     7921 cttcgcatcc acccgagtgc gatacaccat gtacggcgtc tgccgccgat ccgcgccgcc
     7981 attgaatccg gcttgccgat gcagctggtt ggcggtgaag tacagatagc catcgggccc
     8041 catcgacaag gtatccggcc acaggatgcg cgggtcgtgc accacagtcg tccagcgccc
     8101 ctgcgcatcg cgggcatgga tggcgttgtg ctcgtagtcg ctcgcataca gccggccgtt
     8161 ggcgtccatc tccataccat cggacgcgcc cttgtcgccg aggtcgacca cggccgcagc
     8221 cagcgccgcc tcacttacct tggggtcgcg cagcaaggcg gtgggcacgc tgtacagatg
     8281 gcgactggac aacggggtat agaacagcgt cgcgccatcc ggcgacaacg caatgccatc
     8341 ggcagccacg gtgaacggct gcgtggaacc atccgcgttg cgcagccgca tctgctgtcc
     8401 ttccacgatc ggtacgaatg cctgatcggc cgatgtggac acatggccga tcaggcgctt
     8461 ggacgcggcg ccggtagcga ggtcgatcac gatgatgccg ccgatgccgc tcagcgacga
     8521 gtcggtcacg taggccacgc cctcgcgacc gacacggaaa tcgaagcgca catcgttgac
     8581 gtaggtgcgc gcgtcgatga cgttggccgg gaacaccagc gttctggcca cggtattggt
     8641 ggccagatcg atcgccacca gcttggcgcc gccggcctga ggtgcagaga acccgggcgc
     8701 ggcggtgtcc agcacccaca accgaccctg gccatcggcc accacactct gcacgctgat
     8761 gaagtgggcc gccggatcgg gaccgtcctt gcggttgatg cgcgcatccg gatagggcac
     8821 ggcgcggccg tcgcgccatt cggccacgct gtaaggcacc tcatcgcccc agcgcgggaa
     8881 gttgacaaag atcctcccgg tctcggacac cgccacgctg gtgggcatgg cgccctcgaa
     8941 acgcgccacc ggctcgatga tgccgatgct acgatcgctg ggcagcacag gcgttcctgc
     9001 cagcgccagc gcgggggaac tggccagggc cagcacggca gccgccaggc ggcggatact
     9061 gcagttgatc atggttgctc tcgatgcagg tccgggtgca gccccggcgt gggtgcatct
     9121 tcagcggcgc acctggcatc gggtagacgg tgcaacgggg aatcatcttc actgcaggag
     9181 tgaagatgaa aggaagattg atcgcgttga tcgaagcaat gaatatcgtc tatcagttgc
     9241 gtgcctgcct tgtggcgaac ccgctcaaca catctcaatg gctgccaacg cggtctcgaa
     9301 cctgtgctgg ccttcttcac cccaccaggg aacggtcatc acagcacccc gctgctgcaa
     9361 ctggtgcaga agaagcagga aggcttgtac ctcccgctcg ccccacgacg gtcccatgcg
     9421 gtagtcaagc gtcaacccat ggcgcatgac gagcacaccc agttctggca gaagaacgcc
     9481 gtcgcaggcg atgtctgcaa gactgatatg gaaaggctct acttcgtcct ggagaacacg
     9541 ccgcgcgtcg cccggcccca tgaacggctg accacgatct tccgcaccga gccagagctg
     9601 cacgcttcca gaagccgcga cgcgggcacc gcaggcaaac agataggcga acgcatcagc
     9661 cgtcccggcg gcttcacagc acgtgagctc cacttccggg agcgaaccat catcggtgac
     9721 gaagtagcac cgtaacggcg ccaacacctc ctgcgggagg aacattgcga ctcctggctg
     9781 cattgctcct actcatctcc attttcacgc gagtgggagg atcgcacagc gggcgcctcg
     9841 acagccacat ctccaaccgt cttcggcacc atcaacaact ccgccagccc gcgatagatc
     9901 ggcacccggc acaccaaccc ggacacgcca cgcgcgatca acaccgtggc caggatcggc
     9961 agcagcagat cgccgctgtc ggtcagctcc agcgagatca ccgccgaggt cagcggtgcc
    10021 tgggtcacgc cggtcaggta ggcgcacatg cccagcagca cgaacgcacg cgggtccacg
    10081 cccggcatca gtaccgccag gttgtggccc agcccggcac cgaccgccag cgccggcgag
    10141 aacaggccac cggggatgcc cgccacatag gacgccagat tggccagcag cttcatcagc
    10201 ccgaattcgt ggcccaccag cgcctggccc tgcaccagac tgcgcgcctg ctcataaccg
    10261 gtaccgaacg caccttcacc gaacaccagc gccagcagca ccaccaccag gccgcatccg
    10321 gcggccagca gcaccggatg ccgttgccgc agctggccca gccaacgtgg acgccccgcc
    10381 gcactggcca gcacagcacg cgcgaacact ccgcccagca acccggccac cacgccacac
    10441 agcaggatcg ccagccagcc ctggcccagc ggcaaccgcg cacttacatg gccgaagtag
    10501 gtgtagttgc ccagcaggcc cagcgacacc acgccgccga caatcacggc ggtcagcagc
    10561 gtgccggaga accgatgctc gaaacggccg ctgagctcct cgatggcgaa aacgataccg
    10621 gccagcggcg tgttgaacgc cgccgcgatg ccggcagcac caccggccag caggaagtgc
    10681 gagagctcgc gtgggtcctt gaagccgaac catcggccga acaggtacat caggctggcg
    10741 cccacatgca cggtggggcc ttcgcgcccc actgacgcgc cacccagcag cgacagcgat
    10801 gtcagcagca gctttccagc cgaaacggcg ggcgaaaggt tggcctcccg gaacgacgcg
    10861 tccggcttgt ccagggcagc aatgacctgc ggaatgccgc tgccgcgcgt gggcttcagc
    10921 acaccactgg tcagccaggc cagcaacgcg aagatgcccg gcgtgagcag cagggcccac
    10981 cacggcgagt gcgaggtgat gcgctggaac aggtggaagg cggcgtcgct ggccttggcg
    11041 aacaggatcg ccaccagtgc tacggccacg gcaccgcccc acagcgcggc gcggcggcgc
    11101 caggcctcgc tcaggaccag cgcagtgata cggccgcgaa ggcggtaaag atcaatcatg
    11161 cagggcagtc tggacgctgc gaacgctggc ggacagcggc tactgtggct gatggccttg
    11221 caggatgcgg tgaaatgcac tggtactgcg gggaaacgca cccgaaaccc ggatagatgc
    11281 aacgatctgc aacgccgatg ttcagatcgc cagacgatgg agaacgtggg tcagcgccag
    11341 ctgggaacag ccccggtccg gcagtacccc gtcctcgccg ggcgcaccca cctcgaaccc
    11401 ctcctcgaca tcctcgtagt acagcaaccc gccaggcagt tgtgcgacca cccacaccga
    11461 ctcgatggtg cccagcctgt gcagtggcat tgcacgcaat ggcacacgca gcgtttcgaa
    11521 gatggctcgg tgccccggtg agcagtcctg caattgccgc gcgatcagag cttccagctc
    11581 ttcgcgggtg atcggcaacc agctgtcgag agagtccatt gcaacgcggc ccgattgaat
    11641 gtgcacgcct gagtgtatcg ccggcgcagc gcgcaccgcc tccttccgga tcagtttcaa
    11701 cgcgtgtccc agctgcgcgt accggccact gtaaaccata ctaaatacat ttcggttgac
    11761 agccccggtg cgcccaccca cactgccgcc ctcgctccac tcgtacccaa ggtcccgcca
    11821 tggctgctgc catccgccac gactggcaac acgacgaact gcaggcgctg ttcgatctgc
    11881 cgttccctga gctgctgttc cgcgccgcag cggtccaccg cgaccatttc gacccatcgc
    11941 aggtacaggt ttccacgctg ctgtcggtga agaccggcgg gtgcccggag gactgcgcgt
    12001 actgcccgca ggcgcagcgc tacagcaccg gggtgaacgc acagaagttg atggacaccg
    12061 acgcggtgct ggccaaggca cgccaggcca aggccgccgg tgcgtcgcgt ttctgcatgg
    12121 gcgccgcatg gcgttcgccg aaggaccgcg acatcccgaa ggtggcggcg atgatcgccg
    12181 gggtgaaggc attgggcctg gagacctgcg ccacgctggg catgctcagt ggcgagcagg
    12241 cgcgtgcgct gaaggatgcc ggcctggact actacaacca caacctcgac accgcgccgg
    12301 actactacga ttcgatcatc cacacgcgcc agtaccagga ccgcctggat acgctggaac
    12361 atgtgcgcga cgccggcctg aaaacctgct gcggcggcat cgtcggcatg ggcgagacgc
    12421 gcgcgcagcg ggtcggcctg ctgctggcgc tggccacgct gccggcccat cccgattcag
    12481 tgccgatcaa caagctggtg caggtggcgg gtacaccgct gcacggcagt gccgagctgg
    12541 acccgttcga gttcgtgcgc atgatcgccg tggcgcgcat cgccatgccg cgctcgatgg
    12601 tgcggctgtc ggccgggcgt gaggccatga gcgacgaact gcaggcgctg tgcttcattg
    12661 ccggtgccaa ttcgatcttc tacggcgaca agctgctgac caccggcaac ccggaaagcg
    12721 agcgcgacct ggccctgttc gcgcggctgg ggctgcagcc gatggcggtg caggtggatg
    12781 ccgagggcca cgaccacggt ggcaccgtgc acgccgacat cagcgccgat gctcccggct
    12841 gcggctgcgc tcacgcggcc tgagacggga tgcaggcagg cgtcgcggca acgcgctacc
    12901 ctagccgccc cgtcgccgca ttcagccgcc atggcccgcc ccgacctgac cgctcgcctt
    12961 catgcccagc gcgccctgcg cgatgcccag gggcgtcgcc gcccgcgacg cacggtcagc
    13021 cgtcgtgatg gtgtgcgcct ggaagtggac ggccagtggc tgaccggctt ctgcagcaac
    13081 gactacctcg gcctggccca gcagttcagc gtggtcaacg cgctgcagga tgccgccgcg
    13141 cgcgagggcg ctggcgccgg tgcctcgcac ctggtgtgcg gccaccacgc aatgcacgat
    13201 gcgctggagc gcgaagtggc cgactggctc ggctacccgc gtgcactgct gttcggcagt
    13261 ggcttcgccg ccaacctggc ggtgcagcag gcgctgctga gcgaagagaa cgatgtgtgc
    13321 gtgcaggaca agctcaacca cgccagcctg ctcgacgcca cgcgtctggc cggtgcgcgc
    13381 ctgcgccgct atccgcatct ggatgcggaa ggtgcgatgc gtcagctcaa gcatacgccc
    13441 gatggcgcgg cgatgctggc caccgatggt gtcttcagca tggatggcga catcgcccca
    13501 ttgcgtgcac tgtcgctggt ggcacgactg cagcaggcgc tgttctacgt cgatgacgcg
    13561 cacggcgtag gcgtggtcgg tgatggccgt ggcgcggtcg cggcagccgg actgggcctg
    13621 gatgatgtgc cgctgcagct ggtcacgctg ggcaaggcgc tgggtggttc cggcgccctg
    13681 gtgctgggcc gcgacgacct gatcgagcat ctggccgaaa ccgcacgccc ctatatctac
    13741 accaccgccg taccaccggc gatggcggcg gcggcactgg aagcggtgcg cctggcgcgc
    13801 cgcgaccact ggcgccgctc caaactggct gatctgatcg cgctgttccg cagcgaagcg
    13861 cgtcgccacg gactggacct gatggcctcg gagaccccga tccaaccgtt gctgtgtggc
    13921 gacgaccact cggccgtggc gatgtcgcgg gcgctggaac aggccggctg gctggtcggc
    13981 gcgatccgac cgccgacggt accggaaggc aaggcgcggc tgcgcgtcac cctgtccgcg
    14041 ctgcactcgc cggaccaggt gcgcggcctg gtcgacgcca tcgccagcgc gcgtgacctc
    14101 gtggccctgt ccgcacgtga gagcgccccg ccaccgctgc ccgcctttgc ctgagttccg
    14161 cgtcgttgcc catgcatatt gaagtgaccg gccgtgggcc ggacctggtt ctgatccatg
    14221 gctgggccct gcagggcggt gtgttcgcac cgctggtgca gcgcctggcg gaccggttca
    14281 ccctgcatcg ggtcgatctg cccggccacg gccatagccg cgacgacacc acgccgctgc
    14341 gcctgccgtt cgtggtcaac gccattgccg cggccacgcc gccggcggtg tggtgcggct
    14401 ggtcgctggg cgggctgttc gcactgcatg cggcagcgac gctgccgaag gtgcgcgggc
    14461 tggcgatgat cgcggccacg ccgcgtttcg tgcgtggcga ggattggccg catgcagtgg
    14521 aaccgacagt gttcgagcag ttcgggcgtg agctggccac cgacttcggc ggcaccctgg
    14581 aacgcttcct ggcactggac gtgatgggct cggcgcacgc ccgcgaggag ctgcgcaccc
    14641 tgcgccagcg cctggtcgag cgcggtgcgc ctaccgaacg cgcgctgctg gaaggcctgc
    14701 gcctgctgga aaacaccgac ctgcgcggcg cactgccggc cctgggcaaa cccagcctgt
    14761 ggatcgccgg ccagcgcgac cgcctggtgt cgccggccgc gatgcaggcc gctgcggcgc
    14821 tggccccgca gagccaggcg ttgaccgttg cccacggcgg ccatgcgccg ttcctcggcc
    14881 atgccgatga ggtcgccgcc gccctgcaac acttcgttgc cggcctgtca ccggccgatg
    14941 gcggacaatg agcgccttcc gaacagcgca ggactgacgc atggatctgg gtatcaacgg
    15001 ccgctgggca ctggtctgcg gcgcaagcaa ggggttgggc ctgggctgcg cgcgtgcgct
    15061 ggtgcgcgag ggcgtcaacg tggtgatcgt ggcccgtggc gaggcggcgc tgcagcacgc
    15121 ggccgaggaa ctgcgtgccc tgcccggcgc tgcggatgtc cgcgcggtcg ccgccgatgt
    15181 caccaccgag gccggtcgcg ctgcggcact ggccgcgtgc ccgcaggtgg acatcctggt
    15241 caccaatgcc ggtggcccac cgcccggtga tttccgcagc ttcgagcgcg atgactggat
    15301 cgccgcgctg gacgccaaca tgctggcccc gatcgcactg atccgcgcca ccgtggacgc
    15361 gatgatcgat cgcggcttcg gccgcatcgt caacatcacc tcctcggcgg tgaaggcccc
    15421 gatcgacatc ctggcgctgt ccaacggcgc gcgcagtggc ctgaccggct tcgtcgccgg
    15481 cctgtcgcgc cgcaccgtgg cccacaacgt caccatcaac aacctgctgc ccggccagtt
    15541 cgacaccgac cgcctgcgcg ccaacttcgc ccacagtgcg ggcaaggatg gcgacgccgg
    15601 cgaagtggcc gagcgccgcc gccagcagat tcccgccggc cgcttcggca cgccggatga
    15661 attcggcgcc gcctgcgcct tcctgtgcag cgcacaggcc ggttacctca ccgggcagaa
    15721 cctgctgatc gacggcggcg cctaccccgg tacgttctaa gagactttcg caatgccgtc
    15781 ccacttcgat gcccgccacg tccgccgcgc gttcgcccgc gctgccaaca gctacgacgc
    15841 cgccgccgcc ctgcagcgcg aggtgcagtc gcggctgatc gagtcgctgg actatctgga
    15901 ggcgcgcaag cccgaggtgg tgctggacat cggcgccggt accggccacg ccagtgcact
    15961 gatgaagaag cgctggccga aggcgcaggt gatcgcgctg gacgtggcat tgccgatgct
    16021 ggaccaggcc aagcgccagg ccggctggtg gaagccgttc cagcgcctgt gcggcgatgc
    16081 ggccgcgctg ccgctggccg acaacagcgt ggacgtgatc ttcagcaacc tgtgcctgca
    16141 gtgggtggac gacctgcccg cggtgttcgc cgggttccgc cgcgtgctca agcccggtgg
    16201 cctgctgttg tgctcgacct tcggcccgga gacgctggtc gaactcaacg aagcctttgc
    16261 cgccgccgac gatcgcccgc acgtcagccg cttcgcgcag attgcccagt tcggcgatgc
    16321 gctgatgatg gccggcttcc gcgacccggt gctggaccgc gacgtgttca ccctgaccta
    16381 cgacgatctg ccctcgctga tgcgcgaact gcgcgcgatg ggtgcgacca acgcgaggac
    16441 ggaccgccgc cacacgctga ccgggcgtgg ccgtttcgct gcggccgccg ccgcgtacga
    16501 gccgatgcgc cgcgccgacg gcaagctgcc gagcagttgg gaagtgattt atgcccacgc
    16561 ctgggcgccg gacccgggtg ccccgatccg cgaaggcggg catgacgtgg cttcggtacc
    16621 ggtgtcggcg attccgatcc ggcgcaagca gacctgatca cgcgaccgcg aatctgcttt
    16681 tggtaggtgc caaccttggt tggcacaact catcagatcg cggtgccgcc agccgtgtgc
    16741 cgaccaaggt cggcacctac cgattcatgt atgcgcac
//
LOCUS       DAOKIP010000077        16653 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.077,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000077 DAOKIP010000000
VERSION     DAOKIP010000077.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 16653)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16653)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16653
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.077"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(4..978)
                     /locus_tag="QEL58_002093"
     CDS             complement(4..978)
                     /locus_tag="QEL58_002093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012509707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Dyp-type peroxidase"
                     /protein_id="HDS1676566.1"
                     /translation="MNSQPAPITALNHTLDNEPQQITAPLTHSAAFLVLKVKDDAASI
                     AKAREVLASTDDLIKNTAIREIERTFTCNVAIGHRVWQPLVGSTPPRELKPFREIKGA
                     THTAVSTPGDLLYHIRARTMDLIVAFERNLLMAFGDAVETVDDVAGFRYFDGRDLLDF
                     VDGTANPEGLSLPEATIVGDEDPDHAGGSYVVVQKYLHNLDAWRAQKTEAQEAIIGRT
                     KHDNIELDDAPADAQKSHKTLCTIEDADGEHEILRDNMPFATPGRGEYGTYFIGYTRR
                     LWVIETMLERMFIGNPAPLHDRILDFSTAVTGVTFFAPARKVLADLGD"
     gene            1374..2309
                     /locus_tag="QEL58_002094"
     CDS             1374..2309
                     /locus_tag="QEL58_002094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017355101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676567.1"
                     /translation="MEEDTLASILTPQLAPALLVLLLAATGSTHAAGAGSFYEALQRY
                     QDDDAKGCADALGAMYHNGERFPDGGELLLVECTAATGDHAAAMAYVIALLGQDRLPL
                     EDLLHKDRPGLNALRAGPEWPRMLARAEAMQKQRAGLMDEPLRRELLDREARDQAAQH
                     AAIADGGGEAFKGTAPVAKANAEWLKTVIAEKGWPTRSKVGRDGAKAAWLLVQHADQD
                     PDFQAQVLPLIEHAAQAGEADRADVALLTDRVLVAQGKPQRYGSQFVQGDDGAMQLRP
                     TEDMPGLDARRSAMGLPSLAEYKAILAESYGKPVN"
     gene            complement(2312..2923)
                     /locus_tag="QEL58_002095"
     CDS             complement(2312..2923)
                     /locus_tag="QEL58_002095"
                     /inference="COORDINATES: protein
                     motif:HMM:NF012655.1,HMM:NF037150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR family transcriptional regulator"
                     /protein_id="HDS1676568.1"
                     /translation="MSTPVAPTTRKPRQRDAEATREAILASARRAFALSGYDGAGVRD
                     IAAGAGVTAMMVNRYFGSKEQLFAEVVEDTMTQGSLIAGGIMDQPEPGKALARALVKM
                     TRADATPMDGFLITFHSASSPLAAEIGRDKIAAHHLETVAASLQGTQRAERAALILAM
                     ISGFQVMRQMIALPALADADEDELAELLGTVFERLIQRPAAGP"
     gene            3050..4084
                     /locus_tag="QEL58_002096"
     CDS             3050..4084
                     /locus_tag="QEL58_002096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015448026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde reductase"
                     /protein_id="HDS1676569.1"
                     /translation="MKTTVLVTGGTGFIAQHCILALLAAGYDVRTTVRSLSREAEVRQ
                     QLKVGGAEPGDRLSVVVADLGRDEGWAEAVAGCSHVMHGASPTPTGEQTSEEQWVRPA
                     VDGNLRVLRAARDAGVQRVVLTSAFGAICAGHGDIGRPFNETDWSDLSADVWLYQKSK
                     TLSERAAWDFIAREGGGLELSVVNPTAVLGPVLGSDYSHSIRLVRNLLQGQKGSPKIN
                     CGFVDVRDVADLHLRAMTHPAASGERFIAIAGDSLWLGEVAKILKQRMGASAGKVSTR
                     VIPNWVMRLGALKDPALRGSIPLLGRTMNATSEKAQRMLGWSPRSREDAIVATAESLI
                     RLRLVQSPDH"
     gene            complement(4214..4789)
                     /locus_tag="QEL58_002097"
     CDS             complement(4214..4789)
                     /locus_tag="QEL58_002097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004134798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ax21 family protein"
                     /protein_id="HDS1676570.1"
                     /translation="MNKNSLLALGLLAALPFAASATDGLSYNYVEGGYVNTDAKGGDA
                     DGWKVKGSVAVHPNFHIFGDYSAQETDKFKNDVDQWRLGVGYNYGIAPNTDLVARVAY
                     QKYDEKRGLDFNGYSTEVGVRTAFNPYVEGYVMAGYEDFSKKHGYNPDGEFYGRVGAT
                     AKFNQNWGLSGEVKLAKAGDREWFVGPRFTW"
     gene            5333..5605
                     /locus_tag="QEL58_002098"
     CDS             5333..5605
                     /locus_tag="QEL58_002098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012509703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676571.1"
                     /translation="MKLTSQHLKMARALSVALIATVSLGACASYKNEFATINSRLDQL
                     DVKVQGAAQSAESANQSAQQANQRLDQIEGRVQQLERAPAGRKPRG"
     gene            5764..6450
                     /locus_tag="QEL58_002099"
     CDS             5764..6450
                     /locus_tag="QEL58_002099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019338376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676572.1"
                     /translation="MALAVACSGVANARDKDAPAPPVAAVDELPPDQSVSETVIELAG
                     WVVASKDNQGYPFAVMDKAAAQVLVFSGEGKLRGAAPALFGSAIGDHSAPGVAKLALS
                     AIPGHDRTTPAGRFIGGYGPSDDAGRVLWVDYDSAVSMHPLPPGSPKEKRAERLATPT
                     PGDNRVTHGCINVSPAFYEQIVQSTFEKGGVFYILPDKDSIAKTFPEFAQSRGDAKDQ
                     DEKGARHASK"
     gene            complement(6457..6831)
                     /locus_tag="QEL58_002100"
     CDS             complement(6457..6831)
                     /locus_tag="QEL58_002100"
                     /inference="COORDINATES: protein motif:HMM:NF013098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HDS1676573.1"
                     /translation="MKIESISPILSVDHLAESIAFYCGTLGFELAWSWGDPTDIAAVC
                     RDGVEITLTQRSGSKPAGAAHAYLVVSGIDDYYRTLEGSGVTIVVPIGDRPYGMRDFR
                     LADPSGNELSIGQVMDNRDSAR"
     gene            7044..7703
                     /locus_tag="QEL58_002101"
     CDS             7044..7703
                     /locus_tag="QEL58_002101"
                     /inference="COORDINATES: protein motif:HMM:NF021576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2306 domain-containing protein"
                     /protein_id="HDS1676574.1"
                     /translation="MRGSKMPHRFPKVARWTARLVFALLCAAVAAYAFTVLYGQPHAD
                     NPLQMKFAASGLDVPAHLFGGGLALLLAPLQMSGWVQRHLPRLHRLSGGLYAGGVLVA
                     GLGGLSLALHAEGGAPTGIAFGLLALAWLATTGLGIGHALAGNLARHRQWMWRSIALT
                     ASAVTFRLILGIGLGVLHLPFPPVYLAAAWGCWVFNLALCELVLRWPRRPPATALSAA
                     R"
     gene            complement(7689..8816)
                     /locus_tag="QEL58_002102"
     CDS             complement(7689..8816)
                     /locus_tag="QEL58_002102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDS1676575.1"
                     /translation="MAFWTVVFAIGAAQAALLALALWRRPANAGANRVLAMWIALIGI
                     DLAVKALYWDPSYPAPTKALRFVGLFPFLYGSLFYVYVRVLTEARAVRWRDAVHLSGF
                     IIVLALHAGFFLRGLVPAEGMLARTLPGIAELEWMRLNIVLYAYSLSYVIAGLLRVGR
                     YRRGLLRRRSDADRMSLHWIDAMAISQILIWLIATTQWLVRIPWIDYPLIYGLVAAWV
                     FLMGYFSLTQPAVLVEPVAEPAPANREVVPASDDARVAEVEVRLSQLMAEQQLYREPA
                     LTIGQLARRSGYPEYLVSAVINRRFGGNFWEYINRQRIEAAASHLADGADTRTILDIA
                     YACGFTSKSTFNAAFKRLLGETPSVFRKRHAMAGTPQSPSR"
     gene            complement(8939..9613)
                     /locus_tag="QEL58_002103"
     CDS             complement(8939..9613)
                     /locus_tag="QEL58_002103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005411872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676576.1"
                     /translation="MRFRVAGMALVVGLLVACGQAPEKAAETAPVVASDAPAGTPAAT
                     TTVVESEPSIEDGVDPSVWDSEGEPEDSGGGRELTCKDNPLATHFFTLVGGNTVDDCG
                     RKDPKVLAAFDALMKGTQAAESADKDIPSLRERLLSGPSGPGELLVLQGEPWWFYTAC
                     QAHDCPGTALAMLYSPDQSKMVGRLTARCRVWWLGEPTAEQREQIEQLRPLDDAALKE
                     DSAICE"
     gene            9727..10203
                     /locus_tag="QEL58_002104"
     CDS             9727..10203
                     /locus_tag="QEL58_002104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012509699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HDS1676577.1"
                     /translation="MRRTRLAVIFCSALLLASPTIAHDAEGAKPAPPLPDTALPAPLD
                     RVLRDYEQAWRKGDAKALVRLFAEDGFILQSNQAPVRGRKAIEAAYSGQSGSPLRLRA
                     LAYAVEGNVGYIIGGYTFGNNVGDTGKFTLTLKRVGDGPWMIFSDMDNGNAPPRAR"
     gene            complement(10346..11371)
                     /locus_tag="QEL58_002105"
     CDS             complement(10346..11371)
                     /locus_tag="QEL58_002105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004134677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent glycerol-3-phosphate
                     dehydrogenase"
                     /protein_id="HDS1676578.1"
                     /translation="MSTTADKIAVLGAGSWGTALASLLARHGHPTVLWGRDAAVVEAI
                     DQRHENPRYLPGIPLPDSLRATTDLASAVEGAAWILVVTPSHAFGETVRALAPLRPAG
                     AGVAWATKGFEPGSGRFLHEVAREVLGEDVPLAVVTGPSFAKEVTQGLPTAITVHGDV
                     PEFAQTVAEAMHGPAFRAYTGDDMVGAELGGAMKNVLAVATGVADGMQLGFNARAGLI
                     TRGLNEMLRLAAAIGAKPETLMGLAGLGDLVLTCTGDLSRNRRLGLALGRGQTLQDAV
                     REIGQVVESVQTADEVMRQARRHGIDLPISDRVRAVLHGEQTPEEGLRALLAREQKPE
                     YPDTLFK"
     gene            complement(11392..11910)
                     /gene="secB"
                     /locus_tag="QEL58_002106"
     CDS             complement(11392..11910)
                     /gene="secB"
                     /locus_tag="QEL58_002106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005407596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-export chaperone SecB"
                     /protein_id="HDS1676579.1"
                     /translation="MSEEITNGAAAPVDAATGPAFTVEKIYVKDVSFESPNAPTIFND
                     QVQPELQLNLNQQVQRLGENAFEVVLAVTLTCQAGERTAYVAEVKQAGVFGLVGLDPQ
                     SIDVLLGTQCPNILFPYVRQLVSDLIQAGGFPPFFLQPINFEGLYAETLRQRQEQGDA
                     PSLADSEPAGNA"
     gene            complement(12011..12448)
                     /locus_tag="QEL58_002107"
     CDS             complement(12011..12448)
                     /locus_tag="QEL58_002107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014645505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HDS1676580.1"
                     /translation="MNYEELLAFAGRNPMLSAALVGLTVAIIVTEIRRLFRGFKGIKP
                     AELTQLMNAGGTVVVDLSASGDFEKGHIAGSRNAQASAFGPDNKLVANAKQSPVVLVC
                     RSGNASETAAKALKKAGFEKVYVLDGGIPAWQQAELPLVKGRN"
     gene            complement(12506..12931)
                     /locus_tag="QEL58_002108"
     CDS             complement(12506..12931)
                     /locus_tag="QEL58_002108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014035526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676581.1"
                     /translation="MRRLIQFLICSLLLASAVASADDLSRKQRKLLEETQIAYGATIR
                     WGSMDDAIGYLDPKLRKEKPPTEFELNRYAQLRVSSYRERSSASLEGGEVERRVEIGV
                     INQNTQAERTVVVVERWRWDPEAKRWWQSAGLPDLWKGQ"
     gene            complement(12964..13431)
                     /locus_tag="QEL58_002109"
     CDS             complement(12964..13431)
                     /locus_tag="QEL58_002109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YiiD C-terminal domain-containing protein"
                     /protein_id="HDS1676582.1"
                     /translation="MSVDALTSSLAALQDVLDCMPAVRAMQIQLDGYADGVLRITAPL
                     AANVNDKGNAFGGSLASVLTLSGWALVSLRLRLAGHDAEVYVADSNLRYLAPVYEDLH
                     AHAEAAEASGWDAFLNTFRQRRKARISIIATQPGADGRPAAEFSGRFVAFAKG"
     gene            13467..14276
                     /locus_tag="QEL58_002110"
     CDS             13467..14276
                     /locus_tag="QEL58_002110"
                     /EC_number="4.2.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005411868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III synthase"
                     /protein_id="HDS1676583.1"
                     /translation="MQAMADHTIPTGAAGSDAAWTLISLRPQGQHVALRRAVAGLGGH
                     VLALSPWRLQRLHGTPVVRQLQRALNCDRVVFTSPAAVAAAASLLSLAEAQRSPWLTV
                     GEGTARALQAHGISEVHAPQRMDSEGLLALPVLASVQGLRIGLVTAPGGRGLIAAQLQ
                     AAGASIERADVYQRRLLRLAPRTLARLAHSAFPWVLAVSSGEALQHFWQQLPTALQQR
                     LQAHATAVVASDRLGEQARALGLQHVVRAAGPTTAQLVAAAHATLTVPAAT"
     gene            14380..15357
                     /locus_tag="QEL58_002111"
     CDS             14380..15357
                     /locus_tag="QEL58_002111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005407591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III C-methyltransferase"
                     /protein_id="HDS1676584.1"
                     /translation="MNDTPPVSPPRRSARWLLPLAGVAVLGAGGYAGWYFWQQQQSEQ
                     AAQAQTTAVQLQGLEATLDALRRDQRATSQRLQDAAATNRVLRDEMLGLSQRSALLEE
                     NLAKLADSANQGRQAVQRDEAELLLTQAAQRLNYADDVDGARRLYAQAATALADLPDS
                     DGLNLRQALVQERDALDALGAGPRVQSLQRLDALAKALQGLPSQVTGNAAPPAARAWW
                     QATLAPFVDITPSRQNGPLTAAERRNADDALQLELTLARAAIERGDRAGRDTALVRVE
                     HWAQRRWPDSPALRAQRAELKTLRELPLQASNTVLGSTLQQLRTQTDRR"
     gene            15364..>16653
                     /locus_tag="QEL58_002112"
     CDS             15364..>16653
                     /locus_tag="QEL58_002112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012509696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme biosynthesis protein HemY"
                     /protein_id="HDS1676585.1"
                     /translation="MKPLQSLVVLLLAVAIGVVAAQWLGADDLNRFGEVILRYGGYDY
                     HSNLPKVALLAVIAVLVLWLLWSLIAAPFRAWGRYRRKQGRVRLIDGLQAYEHGQWQR
                     AEKLLDGAAKDPEVSAVALANAVRSAQARADGPAGEALLQRLGESDATLQALLRAEQL
                     LARDLPVDAINALDVAAIQPLPPRGLWLRTEALAQAGRAHEAYGQLGALRQSKVLPTD
                     ASSELEARLAAQALLEAADVNALAAQWEATPKALRPTPDVVGAYASRAVALNWDEPAL
                     LALEQALDHRWDDELVTLYGRLPAERLATRQANLARWRNVHDSSPALRLAQGRVALAQ
                     QQWDAADAFLHEAIASGAGAPAWEALGELFAQRGEHALAAQCLANALRLQRGEDSVAL
                     VRGNETPLRATVEEQPIVVQPPVYDANEERDEFGNPRL"
BASE COUNT         2790 a         5535 c         5622 g         2706 t
ORIGIN      
        1 cgatcagtcg cccagatcgg ccagcacctt gcgcgcgggc gcgaagaagg tcacgccggt
       61 gacggcggtg gagaagtcca ggatgcggtc gtgcagcggc gcgggattgc cgatgaacat
      121 gcgttccagc atcgtctcga tcacccacag gcggcgcgtg tagccgatga agtaggtgcc
      181 gtactcgcca cggcccggcg tggcgaacgg catgttgtcg cgcaggatct cgtgctcgcc
      241 gtcggcgtcc tcgatcgtgc acagcgtctt gtgcgacttc tgcgcatcgg cgggcgcgtc
      301 gtccagctcg atgttgtcgt gcttggtgcg gccgatgatc gcctcctggg cttcggtctt
      361 ctgcgcgcgc caggcatcga ggttgtgcag gtacttctgc accaccacgt aactgccacc
      421 ggcgtggtcc ggatcttcgt caccgacgat ggttgcctca ggcaacgaca gcccttccgg
      481 gttggcggtg ccatcgacga agtcgagcag gtcacggcca tcgaaatagc ggaaaccggc
      541 gacgtcatca acggtttcca ccgcatcgcc gaaggccatc agcaggttgc gctcgaacgc
      601 cacgatcagg tccatcgtgc gtgcacggat gtggtacagc aggtcgcccg gcgtggaaac
      661 cgcagtgtgg gtcgccccct tgatctcgcg gaacggcttc agttcgcgcg gcggcgtgct
      721 gcccaccagc ggctgccata cgcgatggcc gatggccacg ttgcaggtga aggtgcgctc
      781 gatctcgcgg atggcggtgt tcttgatcag gtcgtcggta ctggccagca cctcgcgtgc
      841 cttcgcgatc gaggccgcgt catccttcac cttcaacacc aggaacgcgg ccgagtgggt
      901 cagcggcgcg gtgatctgct gcggctcgtt gtcgagcgtg tggttgaggg cggtgatcgg
      961 tgcgggctgg gagttcacga cggttcctgc tggcttgagg cgggcgcatc gcgcgcggcg
     1021 atgtgcgggc gatcatagcg gaacccccct gccagcgacg gagcggttct cagttcgcca
     1081 ctacgcagaa ggggcagcgg gcgcggaggc gtcgcgcggc tgtccgcggg tgatctcgaa
     1141 tgggtcccgc ccttgccacg cgatacgcag gaagggtccg gccaacaggc cgcgctcgcg
     1201 aaaccatgcg aagacctcgg cagggcacca ttcgcggccg tccgaaacgg caatgccgca
     1261 ctcacgcagt gcggttctcc ctggctccgc gccagtgtgc cgccacccac agggcacgaa
     1321 cactggcaca ctgcaggtac cggcggcatg gcattgccca tgcagcggcc ttcatggagg
     1381 aagacacgtt ggcatccatc ctcacgcccc agctggcacc ggcattgctt gtgctgctgc
     1441 tggctgcaac cggcagcacc catgcggccg gggccggttc gttctacgag gcactgcagc
     1501 gctatcagga cgacgacgcc aaaggctgtg ccgatgccct cggcgcgatg taccacaacg
     1561 gtgagcgctt cccggacggt ggcgagctgt tgctggtcga atgcaccgcc gccaccggtg
     1621 accacgccgc ggcgatggcc tacgtcatcg cgctgctggg ccaggaccgc cttcccctcg
     1681 aggatctgct gcacaaggat cgcccaggcc tgaatgccct gcgtgccgga ccggagtggc
     1741 cacggatgct ggcccgcgcg gaagcgatgc agaaacaacg tgcgggactg atggacgaac
     1801 ccttgcgcag ggaactgctc gaccgtgaag cccgcgacca ggccgcgcag catgcagcca
     1861 tcgcggacgg cggcggcgag gccttcaagg gcaccgcacc cgtagccaag gccaatgcgg
     1921 agtggctgaa gaccgtgatc gccgagaagg gatggccgac ccgttcgaag gtcggccgtg
     1981 atggcgccaa ggcggcctgg ctgctggtgc agcacgccga ccaggaccct gatttccagg
     2041 cccaggtgct gccgttgatc gaacacgccg cccaggcagg cgaggctgac cgtgccgacg
     2101 tggccctgct caccgaccgc gtgctggtgg cgcagggcaa gccgcagcgc tacggcagcc
     2161 agttcgtgca gggcgacgac ggcgcgatgc agttgcgccc taccgaagac atgcccggcc
     2221 tggacgcgcg gcgcagcgcc atgggcctgc cgtcactggc cgagtacaag gcgatcctcg
     2281 ccgaaagtta cggcaagccg gtgaactgat cctacggccc ggccgcaggc cgctggatca
     2341 accgctcgaa taccgtaccc agcaactcgg ccagctcgtc ctcgtcggca tcggcaaggg
     2401 ccggcagcgc gatcatctgc cgcatcacct ggaagccgga aatcatcgcc aggatgagcg
     2461 cggcgcgctc ggcccgctgc gtgccctgca gcgaggcggc cacggtctcc aggtgatgcg
     2521 cggcgatctt gtcgcggccg atttccgctg ccagtgggct cgatgcggaa tggaaggtga
     2581 tcaggaatcc gtccatgggc gtggcatcgg cgcgggtcat cttcaccagt gcgcgcgcca
     2641 gtgccttgcc cggttccggc tggtccatga tgccgccggc aatcaggctg ccctgggtca
     2701 tggtgtcttc caccacctcc gcgaacagct gctccttcga gccgaagtag cggttgacca
     2761 tcatcgccgt caccccggcc ccggccgcga tgtcacgcac tccagcaccg tcatagccgg
     2821 acagggcgaa ggcccggcgt gcggacgcca ggatcgcctc gcgggtcgct tcggcatcac
     2881 gttggcgggg cttgcgggtg gtcggtgcga cgggcgtgct cattcgttaa gtatacaact
     2941 gtagacaatg accggcaacg catgtataca gctgtagaca tagccaccca tgccgctgga
     3001 tccgcgtcgg gatggcccgc caatcccccc acgtatctgg agagttccca tgaaaacgac
     3061 cgtcctggtg accggtggca ccggcttcat cgcccagcac tgcatcctgg ccctgctcgc
     3121 ggccggctac gacgtccgca ccacggtgcg ctcactgtcg cgcgaagcgg aggtgcgcca
     3181 acagctgaag gtcggtggcg ccgagccggg cgatcgcctc agcgtggtgg tggccgacct
     3241 cggtcgcgac gagggctggg ccgaagccgt tgccggctgc agccacgtga tgcacggagc
     3301 atcgcctaca cccaccggcg aacagaccag cgaagaacag tgggtgcgcc cggccgtgga
     3361 tggcaacctg cgcgtcctgc gcgcggcgcg cgacgccggc gtgcaacggg tggtgctgac
     3421 ctcggccttc ggcgcgatct gcgccggcca cggcgacatc ggccgcccgt tcaacgagac
     3481 cgactggagc gatctgtccg ccgatgtctg gctctaccag aagtcgaaga cgctctccga
     3541 gcgtgctgcg tgggacttca tcgcgcgcga gggcggtggc ctggagctct cggtggtgaa
     3601 cccgaccgca gtgctcggcc cggtgctggg cagcgactat tcgcactcca tccgcctggt
     3661 gcgcaatctg ctccagggcc agaagggatc gccgaagatc aattgcggat tcgtggacgt
     3721 gcgggacgtg gcagacctgc atttgcgtgc gatgacccat ccggcggcca gcggcgagcg
     3781 cttcatcgcc atcgccgggg acagcctctg gctgggcgag gtggcaaaga tcctgaagca
     3841 gcgcatgggc gcctctgcgg gcaaggtcag tacccgtgtc attcccaact gggtgatgcg
     3901 cctgggtgca ctgaaggacc cggcgctgcg tggctcgatc ccactgctgg gccgcaccat
     3961 gaacgcaacc agcgagaaag cgcagcgcat gctggggtgg tcaccgcgtt cgcgcgagga
     4021 cgccatcgtg gcgaccgccg aaagcctgat ccggctccgg ctggtgcaga gccccgatca
     4081 ctgaagcccg ggatgccggt gaacgcggtg cccataaaag tgaagcccgg cgcgaggccg
     4141 ggcttcggtt ggcgtgtggg agagagagag agagtcacac gccagcacaa cacgcactaa
     4201 cgacaggcgt ttgttaccag gtgaagcgcg ggcccacgaa ccactcgcgg tcgccggcct
     4261 tggccagctt cacttcgcca ctcaggcccc agttctggtt gaacttggcg gtggcgccga
     4321 cgcggccgta gaactcgccg tccgggttgt agccatgctt cttgctgaaa tcttcgtagc
     4381 cggccatcac gtagccttcc acatacgggt tgaatgcggt gcgcacgccc acttcagtgg
     4441 agtagccgtt gaagtccagg ccgcgcttct cgtcgtactt ctggtacgca acgcgagcca
     4501 ccaggtcggt gttcggtgcg atgccgtagt tgtagccgac acccaggcgc cactggtcga
     4561 cgtcgttctt gaacttgtcg gtctcctgcg cgctgtagtc gccgaagatg tggaagttcg
     4621 ggtgcaccgc aacggaaccc ttcaccttcc agccatcggc gtcgccgccc ttggcatcgg
     4681 tgttcacgta gccgccttca acgtagttgt acgacaggcc gtcggttgcc gatgcagcga
     4741 acggcagagc agccagaaga cccagggcaa gcagcgaatt cttgttcatc gggacacacc
     4801 tttaattatt ttggtttcgt cgaccgcctc ccgggagggg gagagagagg aggcgatcga
     4861 caggtgtgaa ttatccgtta gggggtctaa tcgaccctga atattgaact gactggtgta
     4921 taaatatggt tcccgttcag ggaactcgcc atgcgccatt gggagcggcc gtactcgcgg
     4981 gaaatgcgat tccttcggcc atcgcaattc ccgcaagtgc gttgcccatg cgacgaacag
     5041 ccgagttgct ggatgtgcgc ttcgaggacg ctgcagctct gcctgacgca agcgaggccg
     5101 cgtgtgtctg ccaagcgagg attcccgctt catgctgatg aattggcgga tatgaagagg
     5161 cgcaaggcgc ttcgatgacg tagatcagct cgcctgatcc cgcttgttaa tgttgggtca
     5221 gcagcaggct tcacagccca tccacgtact caaattgcag ctgaaagcgc ttgtcagcga
     5281 cgggaacaaa cgccgctata ttccagcttc cccagacgaa ggagggagtg gaatgaaact
     5341 gacctcgcaa cacctgaaga tggcccgtgc actcagcgtg gcgctcatcg ccaccgtgag
     5401 ccttggcgct tgcgcctcat acaagaacga gtttgcaacc atcaactcgc gtctcgatca
     5461 gctcgacgta aaggtgcagg gcgccgcgca gagtgcggag tccgccaacc agtctgcaca
     5521 gcaggccaac cagcgcctcg accagatcga aggccgcgtc cagcagcttg aaagggcacc
     5581 cgccggccgc aagccgcgcg ggtaaccgct ccctcacccc ttgaattgat cgacctcagt
     5641 atcgggaacc agtggccttc gccggccact ggcatccttc cagccgaaac tgcattgcca
     5701 aggagtcgtc ccattcgcac ctactcctcc cccgcacgcc gcgtcctgca tgccgcactg
     5761 gtcatggcgc tggccgttgc gtgcagcggc gtagccaacg ccagggacaa ggacgcgcct
     5821 gcaccgccgg tagccgccgt tgatgaactt ccgcctgacc agagcgtgtc cgaaacggtt
     5881 atcgaactgg ccggctgggt ggtcgccagc aaggacaacc agggctatcc atttgcggtc
     5941 atggacaagg cggcggcgca ggtgctggtc ttcagcggcg agggcaagct gcgtggcgcg
     6001 gcaccggcgc tgttcggatc ggccatcggc gatcactccg cacccggcgt cgccaagctg
     6061 gcgctgagtg cgattccagg ccacgaccgc accacgcctg ccggccgctt cattggcggc
     6121 tacggcccct ccgacgatgc cgggcgcgtg ctgtgggtgg actacgattc cgccgtatcg
     6181 atgcacccgc tgccgccggg cagtccgaag gaaaagcgcg ccgagcggct ggcaacaccg
     6241 accccgggcg acaaccgcgt cacccatggc tgcatcaacg tctcgcccgc gttctacgag
     6301 cagatcgtgc agtccacctt cgagaagggc ggcgtgttct acatcctgcc ggacaaggat
     6361 tcgatcgcga agacgttccc ggaattcgcg cagagccggg gggatgcaaa ggaccaggac
     6421 gaaaagggcg cgcggcacgc gagcaagtaa cgcgcgctaa cgagcgctgt ccctgttgtc
     6481 catgacctgc ccgatgctga gttcattgcc acttgggtcc gccaggcgga aatcgcgcat
     6541 gccatagggc ctgtccccga tagggacgac gatcgtgaca cccgatcctt caagggtccg
     6601 gtaatagtcg tcgataccgg atacgaccag ataggcgtgt gctgcgcctg ccggcttgct
     6661 cccggaccgt tgggtgaggg tgatctccac gccgtcgcgg cagacggcag caatgtcggt
     6721 gggatcaccc cacgaccacg ccagttcgaa tccgagcgtg ccgcagtaga acgcgattga
     6781 ctcggcaaga tggtctacgg acaggatggg agagatggac tcgatcttca tgggcgcgag
     6841 aacccttcca tgttcgggtg ttggccgatc atagcgtccg gccggccgca gggccgggcc
     6901 gctggaacag cggacgagcg cagccagcgt tggcattgtc gatgggtcgc cctggccgca
     6961 ctcctccgcc ggtcccgggt acgactccgc cgatccggac gattttcccg tacgtcgcac
     7021 ccacgctcga acctcgatca ccaatgcgag gttccaagat gccacaccgc tttcccaagg
     7081 ttgcccgctg gacggcgagg ctggtcttcg ccctgctctg cgccgccgtg gccgcctatg
     7141 ccttcaccgt gctgtacggc cagccacacg cggacaaccc gctgcagatg aagttcgcgg
     7201 cgtccggcct ggacgtaccc gcccacctct tcggcggcgg gctggccttg ttgctggcgc
     7261 cgttgcagat gagcggatgg gtgcagcgac atctcccgcg gctgcaccgg ctgagcggtg
     7321 gcctgtacgc aggcggcgta ctggttgcgg gattgggggg cttgtcactg gccctgcatg
     7381 ccgagggagg agcccccacc ggcatcgcct ttggcttgtt ggcgcttgca tggctggcca
     7441 ccaccggcct cggcatcggc cacgcgctgg ccggcaatct cgccaggcac cggcagtgga
     7501 tgtggcgcag catcgccctc actgcctctg cggtgacgtt ccggttgatc ctgggcatcg
     7561 gcctgggcgt gctgcatctg ccctttcccc cggtctatct ggccgccgcc tggggatgct
     7621 gggtgttcaa cctggcactc tgcgaacttg tgctgcgctg gccgcggcga ccgccggcca
     7681 ctgcattgtc agcggctcgg tgattgcggg gtgcccgcca tcgcatggcg cttgcggaag
     7741 acactgggcg tttcacccag cagccgcttg aacgccgcat tgaacgtcga tttcgaggtg
     7801 aagccgcagg cataggcgat gtcgagaatg gtccgggtgt cagcgccatc ggccagatgg
     7861 gaagcggcgg cttcaatccg ctggcggttg atgtattccc agaaattccc gccgaagcgg
     7921 cggttgatca ccgccgacac cagatattcg gggtagccgg agcgtctggc cagctggccg
     7981 atggtgagcg ccggttcacg gtagagctgc tgttcggcca tcagctgcga caggcgcact
     8041 tcaacctcgg caacgcgtgc atcgtcgctg gccggtacta cttcgcggtt ggcgggtgcc
     8101 ggttccgcaa ccggctcgac cagcacggcc ggctgggtga ggctgaagta gcccatcagg
     8161 aatacccacg ctgcaacgag gccgtagatc agcggatagt cgatccaggg aatcctgacc
     8221 agccattgcg tggtggcaat gagccagatg aggatctgcg agatcgccat cgcatcgatc
     8281 cagtgcagcg acatccggtc cgcatccgaa cgccgccgca gcaggccgcg ccggtagcgg
     8341 ccgacccgca gcagaccggc aatgacatag gagaggctgt acgcgtacag cacgatgttc
     8401 agccgcatcc attccagttc cgcgatgccc ggcagcgttc gcgccagcat gccctcggcc
     8461 ggcaccagcc cacgcaggaa gaagcctgca tgcagcgcca gcacgatgat gaatcccgaa
     8521 agatgcacag catcgcgcca gcgtacggcc ctggcctcgg tcaggaccct gacgtagaca
     8581 tagaacaggc tgccgtatag aaacgggaac aggccgacga accgcagcgc cttggtgggt
     8641 gccgggtagg acggatccca gtagagcgcc ttcaccgcca gatcgatgcc gatcagcgcg
     8701 atccacatcg ccagcacccg gttcgccccg gcattggccg gccgccgcca cagggccagg
     8761 gcaagcagcg cggcctgcgc ggcgccaatg gcgaagacga cggtccagaa agccatggaa
     8821 ggaggccggt cggcaacggg atggggggga agcttagcag ccggtttccg ggcagaagaa
     8881 caggacgaat ggcctacgcc cgccccggca tgagcggacg ttccccgccc gcatgacctc
     8941 attcgcagat cgcgctgtct tccttcaatg cggcatcatc cagcgggcgg agctgttcga
     9001 tctgctcgcg ctgttcggcc gtaggctcgc ccagccacca cacccggcag cgcgcggtga
     9061 ggcggccgac catcttcgac tgatcgggcg aatacagcat cgccagcgcg gtgccggggc
     9121 agtcgtgggc ctggcaggcg gtgtagaacc accagggttc gccctgaagc accagcagct
     9181 cgccaggccc gctggggccg ctcaacaggc gttcgcgcag cgacgggatg tccttgtcgg
     9241 cggattcggc ggcctgcgtt cccttcatca atgcatcgaa cgcggccagc accttcgggt
     9301 ccttgcggcc acaatcgtcc accgtgttgc cgcccaccag ggtgaagaag tgggtcgcca
     9361 acgggttgtc cttgcaggtg agctcacggc cgccaccgga gtcttccggc tcgccttcgc
     9421 tgtcccacac cgacggatcc actccgtcct cgatggacgg ttcactctcg accacggtgg
     9481 tcgtcgctgc cggtgttcca gcgggtgcgt cggatgcaac cacaggcgcc gtttcggcgg
     9541 ctttctccgg tgcctgcccg caggccacca gcaacccaac caccagtgcc atccctgcaa
     9601 ctcgaaacct cattccctgt ccttgtctga tctgcaatgc atgcgccacg ccggcggcag
     9661 cgtgattcta accagcggcg cgctaggatg cgttcgccgc tcccgtcatc gccaggacct
     9721 ggacgcatgc gccgtacacg actcgccgtg atcttctgca gtgccctgct gctggcatcg
     9781 ccgaccatcg cccacgatgc tgaaggcgcg aagcccgcac caccgcttcc cgatacagcc
     9841 ctgcctgcgc cgctggatcg cgtgctgcgc gactacgaac aggcgtggcg caagggggat
     9901 gcaaaggcgc tcgtccggct gtttgccgag gatggcttca tcctgcagag caaccaggcg
     9961 ccggtgcgcg gacgcaaagc catcgaggcg gcatattccg gccagagcgg cagcccgttg
    10021 cggttgcgcg cgttggcgta tgccgtggaa gggaacgtcg gctacatcat cggtggctac
    10081 accttcggca acaacgtggg ggacaccggc aagttcacgc tgacgctgaa gcgcgtgggc
    10141 gatgggccat ggatgatctt ctcggatatg gacaacggca acgcgccgcc acgggcgcgg
    10201 tgatggattc cgccgggcat ggtccggcgc tactgggcgc caaccaaggt tggcggctac
    10261 cagaagcggt ttccgtcgta gatccacgcc atgcgtggat ggggtgcata aaaaaaaccc
    10321 cggcgcatgg ccggggtttt tcgattcact tgaacagcgt gtccggatat tccggcttct
    10381 gttcccgcgc cagcagcgcg cgcaggcctt cttccggcgt ctgctcgcca tgcagcacgg
    10441 cacgcacgcg gtcggagatc ggcaggtcga tgccatggcg gcgcgcctgt cgcatcactt
    10501 cgtcggcggt ctgcaccgac tcgaccacct ggccgatttc gcgcacggca tcctgcagcg
    10561 tctggccacg gcccagggcc aggcccaggc ggcggttgcg cgacaggtcg ccggtgcagg
    10621 tcagcaccag atcgccgagg ccggccaggc ccatcagggt ctcaggcttt gcgccgatcg
    10681 cagcggccag gcgcagcatc tcgttgaggc cacgggtaat caggccggcc cgcgcgttga
    10741 agcccagctg catgccatcg gccacgccgg tagccacagc cagcacgttc ttcatcgcgc
    10801 cgcccagctc agcaccgacc atgtcgtcgc cggtgtaggc acggaatgcg gggccgtgca
    10861 tcgcctcggc caccgtctgc gcgaactcgg gcacgtcgcc gtgcacggtg atcgcggtcg
    10921 gcaggccctg ggtcacttcc ttggcgaacg acggcccggt gacaacggcc agcggcacgt
    10981 cctcacccag tacttcgcgc gccacctcat gcaggaagcg gcccgaaccg ggttcgaagc
    11041 ccttggtggc ccaggccacg ccggcaccgg ccgggcgcag cggcgccagc gcgcgcacgg
    11101 tttcgccgaa cgcatgcgac ggggtcacca ccaggatcca ggccgcgccc tccaccgccg
    11161 acgccaggtc ggtggtggca cgcaggctgt ccggcagcgg aatgcccggc aggtagcgcg
    11221 ggttctcatg gcgctggtcg atggcttcga ccacggccgc gtcacgcccc cacagcacgg
    11281 tcgggtgacc gtgccgtgcg agcaggctgg ccagcgcggt tccccaggaa ccggcgccga
    11341 gcacggcgat cttgtcagcg gtagtgctca tccgtgacat cgcggcagga atcaggcgtt
    11401 gccggccggc tcggagtcag ccagcgacgg tgcgtcgccc tgctcctggc gctggcgcag
    11461 ggtttccgcg tacaggcctt cgaagttgat cggctgcagg aagaacggcg ggaagccgcc
    11521 ggcctggatc aggtcgctga ccagctggcg cacgtacggg aacaggatgt tcgggcactg
    11581 ggtaccgagc agcacgtcga tcgactgcgg gtccaggccg accaggccga acacgccggc
    11641 ctgcttcact tcggccacgt acgcggtgcg ctcgccggcc tggcaggtca gggtcacggc
    11701 cagcacgact tcgaaggcgt tctcgcccag gcgctgcacc tgctggttca ggttcagctg
    11761 cagctccggc tgcacctggt cattgaagat ggtcggagcg ttcggcgact cgaaggagac
    11821 gtccttgacg tagatcttct cgacggtgaa agcggggccg gtggcggcat cgaccggcgc
    11881 agcggcgccg ttggtgatct cttcggacat ttccagtaac tccaggtgaa tgcaatgaaa
    11941 acgagggtcg aattactgcg atgggggcgg catcaggccc atacaaggcc ggatgcgcca
    12001 cctgcggcaa tcagttgcgg cccttgacca gcggcagctc ggcctgctgc caggcgggaa
    12061 tgccaccatc gagcacgtag accttttcga aaccggcctt cttcagcgcc ttggcggcgg
    12121 tttccgaggc gttgccgctg cggcacacca gcaccaccgg cgactgtttg gcattggcta
    12181 ccagcttgtt gtccgggccg aaggcactgg cctgggcgtt gcggctgccg gcgatgtggc
    12241 ccttctcgaa gtcaccgctg gccgacaggt cgaccaccac cgtgccgccc gcgttcatca
    12301 gctgggtcag ttcggcgggt ttgatgccct tgaagccccg gaacaggcgg cggatctcgg
    12361 tgacgatgat ggccacggtc aggccgacca gggccgcgga cagcatcggg tttcggcctg
    12421 caaaggccag caactcttcg taattcactc aggtcacggg tcgattaagc gggcgccgat
    12481 tgtcgcacaa gccggacgcg gcccgtcact gccccttcca caggtccggc aggccggcgg
    12541 actgccacca gcgcttggcc tccgggtccc agcgccagcg ctcgaccacg accacggtgc
    12601 gctcggcctg ggtgttctgg ttgatcaccc cgatttcgac gcgacgctcg acctcgcccc
    12661 cttccagcga ggcgctgctg cgctcgcgat aggacgacac gcgcagctgc gcgtagcggt
    12721 tgagctcgaa ctcggtcggc ggcttttcct tgcgcagctt ggggtcgagg tagccgatgg
    12781 catcgtccat gctgccccag cggatggtcg ccccgtaggc gatctgggtc tcttccagca
    12841 gcttgcgctg cttgcggctg aggtcgtcgg ccgaggccac ggcgctggcc agcagcaggg
    12901 aacagatcag gaactggatg aggcggcgca tcggtggttt ccccagaacg tcagcctgcc
    12961 atcctaccct ttggcgaagg caacgaagcg accgctgaac tcggcggccg ggcggccgtc
    13021 ggcaccgggc tgggtggcga tgatgctgat gcgggccttg cggcgctggc ggaaggtatt
    13081 caggaaggca tcccagccgc tcgcttcggc ggcttcggca tgggcatgca ggtcttcgta
    13141 gaccggtgcc agatagcgca ggttgctgtc ggccacgtag acctcggcat cgtggccggc
    13201 caggcgcagg cgcaggctga ccagcgccca gccggacagt gtcagtaccg aggccaggct
    13261 gccaccgaag gcgttgccct tgtcgttgac gttggcggcc agcggcgcgg tgatgcgcag
    13321 cacgccatcg gcatagccgt cgagctggat ctgcatggcg cggaccgctg gcatgcagtc
    13381 cagtacgtcc tgcagggcgg ccaacgagga agtcagggca tcaacggaca tcggagcagc
    13441 gaccacgaca acgaagggcc cgcataatgc aggcaatggc cgaccatacg atacccactg
    13501 gcgccgctgg ctccgacgcg gcctggaccc tgatttcact gcgcccgcaa ggccagcatg
    13561 tggcgctgcg ccgcgccgtt gctgggctgg gcgggcatgt gctggccctt tcaccatggc
    13621 ggttgcagcg cctgcacggc acgcccgtgg tacgccagct gcaacgcgcg ctgaactgcg
    13681 atcgcgtggt gttcaccagc ccggctgcgg ttgctgcggc cgcttccctg ctgtcgctgg
    13741 ccgaagcgca acgcagcccg tggctgacgg tgggcgaagg caccgcgcgc gcgctgcagg
    13801 cgcatggcat ttccgaggtg catgcaccac agcggatgga cagcgaaggc ctgctggcgc
    13861 tgccggtgct ggcaagcgtg cagggcctgc gcatcggcct ggtgaccgcg cccggtggcc
    13921 gcggcctgat tgccgcgcag ctgcaggcgg ccggtgccag catcgaacgc gccgacgtct
    13981 accagcggcg cctgctgcgc ctggcgccgc gcacgctggc gcgactggcg cattcagcct
    14041 ttccgtgggt gctggcggtc agcagcggcg aagcgctgca gcatttctgg cagcaacttc
    14101 caaccgcatt gcagcagcgc ctgcaggcgc acgcgaccgc cgtggtggcc agtgatcgcc
    14161 tgggtgaaca ggcgcgggcg ctgggcctgc agcacgtggt gcgcgcggcc ggccccacca
    14221 ccgcacagct ggtggcggct gcacacgcca cgctcaccgt cccggcagcg acctgaacag
    14281 ggacgtgggt cacgcttgcc gctgtcgtcg gcaacagtga tgctgtgcac aacgcggcct
    14341 gccggtcccc cacggcgacg gtgccgacaa ggaagcctga tgaacgacac tccgcccgtt
    14401 tccccacccc gtcgctccgc acgctggctg ctgccgctgg ccggtgtggc cgtgctcggc
    14461 gcgggcggct acgcgggctg gtacttctgg cagcaacagc agagcgaaca ggcggcgcag
    14521 gcgcagacca ccgcggtgca gctgcagggc ctggaggcca cgctggatgc gctgcgccgc
    14581 gaccagcgcg cgaccagcca gcgcctgcag gacgcggccg ccaccaaccg cgtgctgcgc
    14641 gacgagatgc tcggcctgtc ccagcgcagt gcactgctgg aagagaacct ggccaagttg
    14701 gccgacagcg ccaaccaggg ccggcaggcg gtgcagcgcg acgaggccga attgctgctg
    14761 acccaggccg cgcagcgcct gaactacgcc gacgatgtgg atggcgcacg ccgcctgtat
    14821 gcccaggccg ccactgcgct ggccgatctg cccgacagcg atggcctgaa cctgcgccag
    14881 gcgctggtgc aggaacgcga tgcactggat gcgctcggcg ccggcccgcg cgtgcagtcg
    14941 ttgcagcgcc tggatgcatt ggccaaggcc ttgcagggcc tcccctcgca ggtgaccggc
    15001 aacgctgcgc cgcctgccgc cagagcctgg tggcaggcca cgctggcacc gttcgttgac
    15061 atcaccccga gccgtcagaa cggcccgctg acggctgccg aacgccgcaa tgccgacgat
    15121 gcgctgcagc tggaactgac cctggcacgc gccgcgatcg agcgcggaga ccgcgctggc
    15181 cgtgatacgg cgttggtacg cgtggagcat tgggcgcagc ggcgctggcc ggattcaccg
    15241 gccctgcgcg cgcaacgtgc tgaactgaag accttgcgcg agcttccgct gcaggccagc
    15301 aacaccgttc ttggcagcac cctgcagcaa ctgcgcaccc agaccgaccg gaggtaatcc
    15361 cgcatgaaac ccctgcaatc cctggtcgtg ctgttgctgg ccgtggccat cggcgtggtc
    15421 gccgcgcaat ggctcggcgc cgatgacctc aaccgtttcg gcgaagtgat cctgcgttac
    15481 ggcggctatg actaccacag caacctgccg aaggtggcgt tgctggcggt gatcgcggtg
    15541 ctggtgctat ggctgctgtg gagcctgatc gccgcaccgt tccgggcctg gggccgttac
    15601 cgccgcaagc agggccgggt gcgcctgatc gacggcctgc aggcttacga gcacggccag
    15661 tggcagcgtg cggagaagct gctggacggc gccgccaagg accccgaagt gagcgcagtg
    15721 gcgctggcca atgccgtgcg cagtgcgcag gcacgggccg acggccctgc cggcgaagca
    15781 ctgctgcagc gtctgggcga aagcgatgcc accctgcagg cgctgctgcg tgccgaacag
    15841 ctgctggcgc gtgatctgcc ggtggatgcg atcaacgcgc tggacgtggc cgcgatccag
    15901 ccgctgccgc cgcgtggcct gtggctgcgt accgaggcac tggcgcaggc cgggcgcgca
    15961 cacgaggcct atgggcagct gggcgcgctg cggcagagca aggtgctgcc gaccgacgcc
    16021 agcagcgaac tggaagcacg cctggcagcg caggcgctgc tggaagcggc cgacgtcaat
    16081 gcgctggccg cgcagtggga agccacgccg aaggcactgc ggccgacgcc ggacgtggtg
    16141 ggcgcctatg ccagccgtgc ggtggcactg aactgggatg agcctgcatt gctggcgctg
    16201 gaacaggcgc tggaccatcg ctgggacgac gagctggtga cgctgtatgg ccgccttccc
    16261 gccgagcgcc tggccacgcg ccaggccaac cttgcgcgct ggcgcaacgt gcacgacagc
    16321 tcgcccgcac tgcgcctggc gcagggccgc gtagcactgg cgcagcagca gtgggatgcc
    16381 gccgacgcgt tcctgcatga ggcaatcgcc agtggcgccg gggcaccggc atgggaagcg
    16441 ctgggtgaac tgttcgcaca gcgtggcgag cacgcactgg ccgcgcagtg cctggccaat
    16501 gcgctgcgcc tgcagcgcgg cgaagacagc gtggcgctgg tacgcggcaa cgaaacgccg
    16561 ctgcgtgcca cggtggaaga gcagccgatc gtggtgcagc cgccggtgta tgacgccaat
    16621 gaagagcgcg acgagttcgg taatccccga ttg
//
LOCUS       DAOKIP010000078        16347 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.078,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000078 DAOKIP010000000
VERSION     DAOKIP010000078.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 16347)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16347)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16347
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.078"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..524)
                     /locus_tag="QEL58_002113"
     CDS             complement(<1..524)
                     /locus_tag="QEL58_002113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005414104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase"
                     /protein_id="HDS1676586.1"
                     /translation="MTRTPKIVLLTLAVSAALVGCGKTEAPAKDATASTPAPAQATQY
                     TLDESKLPAYNAFQPSDLDTSKDACGAFGDYVNSKWLAANEIPGDRTSWGAFTILDER
                     SVAVQHQLAEQVAQVKNPNHIEKIVGDLWATGMDEAKINAQGIEPLKADLTAIDGLQD
                     KAAIANYLRTSAAKG"
     gene            complement(719..1549)
                     /locus_tag="QEL58_002114"
     CDS             complement(719..1549)
                     /locus_tag="QEL58_002114"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="sel1 repeat family protein"
                     /protein_id="HDS1676587.1"
                     /translation="MKSRTSLLAPLLLALAVPVTSLAAPPAPQAPSALPSDPTEDPLL
                     ISAGFLNGHPDLRFRMLGMEKQRANDLQAAFGFFQRAGFYGDKVSQAMVAEMLWNGTG
                     TAVNRPLAYAWMDLAAERGYKGFLELRERYWAALSEAERVQAVTEGEAVYARFGDAAA
                     EPRLALAMRREQKRMTGSRTGFAGNVKILVPGPNGTTEQIDGTKFYDSRYWDPAQYRQ
                     WQDTIWSTPRVARVDVGSVTQLPAEPGRPSRIPEVAPQPDAPEPKTDDAQPQPIPEQH
                     "
     gene            complement(1685..3652)
                     /locus_tag="QEL58_002115"
     CDS             complement(1685..3652)
                     /locus_tag="QEL58_002115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010340504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S9 family peptidase"
                     /protein_id="HDS1676588.1"
                     /translation="MAALLSPATFAAPSSTPYSIEDFVKHATFNSARISPNGDYLAIS
                     VDLGEQDVLTILRTSDLKVLKVNQLPDKKSVGAFHWISPQRLMFNAVKKQGGYAQPFP
                     TGEWFAVNADGSQARPVIFYGTRDATQRSKSVGNESYSLLDTLRGDDQNVIMQVRYPR
                     SSEGAGTQVVSVDTISGRRTPLARAPKENCDIALDAGKEPRFAVCSSSRDESGEYDER
                     SELYRRDGSNWTLINASKSDGQHLRVLRTTADGTVYAEQDDGKAPAAVGTLDTATGQF
                     KRLFQDPVTEVSQLMWSTDDKQLIGVVNQAGSPKVTLVQDDHPDAALYQSLANAFPGQ
                     MVQFSSYTDDGAKILLSVYSDTNPGELYLFDRASGQARFLLQGRDWLDPKRMATVKPF
                     TVQARDGRQLHGYLTLPKGSEGKRLPMIVNPHGGPIGPRDNWGFNPEAQLLASRGYAV
                     LQVNFRGSGGYGKAFEEAGHKQWADGIQNDILDATHWAIDQGVADKDRLCIYGGSFGG
                     YSALMAPIREPGLFKCAFGYVGVYDVDMLFKKGDIPQRESGLRYLRRTHGTDVAEWTK
                     ASPARRAAEVKIPVFLAAGARDVRAVPEQTELMAKALTEVGNAPEGVIIQSGEMHGFY
                     EVPARVNLYTKMLDFFGRHIGSGAAAGASSP"
     gene            complement(3802..6711)
                     /locus_tag="QEL58_002116"
     CDS             complement(3802..6711)
                     /locus_tag="QEL58_002116"
                     /inference="COORDINATES: protein
                     motif:HMM:NF012801.1,HMM:NF019335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDS1676589.1"
                     /translation="MTIRKALSRHPLSFALTTALLATGIAPAFAQEAGNEAGGKNATN
                     LDRVSVVGSRIKRSDVEGPAPVTVITRTDIDREGFQTVGDMLQTLTQNTTSSFTGDLA
                     VTGFTPNAQVVNLRNLGPGYTLTLVNGRRPAQYPQPYNRDNNVANINSIPSSIVERVE
                     VLTGGASAIYGSDAVAGVVNIVLREHYDGNLVRVTAGTTAEGGGDTVNVELTGGRTGD
                     RWSAVWALQYSDREPVFASQRKWLSDLREGPLGSTATPNLSMAVIRGLASANGPLNHN
                     VLYPGQEKCDALGFDTVTTASRGKYCGSYTSNAARSISNKRQFYSAYGYGTFDFTDTT
                     QGFASVNYYTTKAKASAGTEFWATSGDRFNQTSAGAATQYFWDPNLKDMVSLQRIFTP
                     QELGGNEAASTLYDEYTYDFNVGVRGNFADRFDWEASAGYGYYDYKMDRPRLLAQAVH
                     DYFLGPRLGYLNSTGGTTGNAIYPVYALNQDRWTSPITPDIYRSFSTRVINRSETSVA
                     NANFNVSGDLFDLPAGALGFAGVLEWNRQKMDMVSDPRTDQLRPIDSQTIYNLTSSGE
                     THGTRDRYAIGAEFRVPIFSSLSANAAARYDKYDDISSVDAATTYNFGLEWRPFSNLL
                     VRGSYATSFRAPDMQLIYAQGAASYTTELDEYACRSGTGAGAAQGPRTRAACNATAND
                     PTKYSVQTLVAGNPNLTEEKGKSWGAGFVWDVTDGMSLTVDYYRIRLEDAAAQLSNDY
                     LLRSDAACRLGSTSDPSRPMPSAALCSQLSTLITRVNQPDAPDNGRISRINNAYINTA
                     LQDTSGIDASYKYNLDTDRWGRFNFDLGYSLTLTNKYKQLKDEPLIDYRDLPPEYWNP
                     ERSRARGSVTWSKGDWATTVFGTRYGSAFSSLDTAGTNSAGGYYPRRLPPFFLWNLSV
                     GKKFGENVLATFQVVNVFDNQYRKDNSRTAYPFYDPFIGADPLGRRFYMSLQYKF"
     gene            complement(7178..10000)
                     /locus_tag="QEL58_002117"
     CDS             complement(7178..10000)
                     /locus_tag="QEL58_002117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012480904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDS1676590.1"
                     /translation="MSRSRFLFPRHPLTCAVLSGLFLASASTGALAQDSKSAATNLDR
                     VTVTGSLIPQTQIENQTPVLTISAEAIQARGFSSVAEVLQQSSLTTGGLQGGQTSASF
                     TQGAEAAGMFGLNPGYTKYLINGRPMLSYPALYNGSDAFNNISGIPIDIVDRIEVLPG
                     GQSSLYGSDAIAGVVNIILKERMDGGTLNVRGGAYSDGGGASFRVSGANGFNSRDDRF
                     RALVNVQYEKTNPIWGYQRDITKQNNPRGYTRQLPSNDFLVFDADTDDFLMMDPSNCA
                     SVAGQFDGTTILGTRRAGQSCGSAFGAGYKTIKNSKESSQFYSALTYDVNDNLQLFGD
                     VLYSYETVKYNTGSGYNYWGTDISMGPFFDQSSGRYLGLQRVFAPEDIGGGGYRDIMN
                     TDRSKSYQVTLGARGAIGSNWDYEASITRGEYKLNERGYARWNDPINNWFADNVLGPV
                     LGETDDGYNIYNPNWGAFYSKLPEGAFQSFTGFTTSRSRTWQTQTRAQLTNSSLFKLP
                     GGDAGFAAVIEGGSEGWTYTPDARLTDGTVFATTAVAGNGHRSNYAVTGELRLPLHDM
                     LTVTASGRYDNFKIAGHTVDKPTYSIGLEFRPFESLLVRGKYGTAFRAPSLPDAFQGK
                     SGYYANGSKDYYRCGQLGFDPSNTVDCRYGSVSVFGTQSGNPELKPITADVWNAGLVW
                     APISNLSVSLDYYNWKIKNEVNTLSSDQLLLAEYYCRNGLSNTAGASCEDVANWVTRD
                     ATGALEEIYTPKLNVARQNLEAVTASFKYVQDIGRFGSLQFSSNYTNMLKRELQPQLN
                     DPFLDLLGNPYAMWVYDSYAKVRADGSVGWAIDRFTTTLYFNYIGRTPNYMSYVGRGY
                     DYVDPTSGYKAGKWGSYTTYNLSVNYRAMDNLTFSLMVNNLFNKVPDNQQHSYAGNID
                     VPYNNALYNAYGRAIYVQAQYDFGAK"
     gene            complement(10362..13169)
                     /locus_tag="QEL58_002118"
                     /pseudo
     CDS             complement(10362..13169)
                     /locus_tag="QEL58_002118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005418014.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
     gene            13383..14237
                     /gene="apbC"
                     /locus_tag="QEL58_002119"
     CDS             13383..14237
                     /gene="apbC"
                     /locus_tag="QEL58_002119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006459367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster carrier protein ApbC"
                     /protein_id="HDS1676591.1"
                     /translation="MNSSLRRPHASQVQKGLTPHARIRNVIAVGSGKGGVGKSTTAVN
                     LAVALQQLGARVGVLDADIYGPSVPAMLGLSGRPESPDNKSIEPLRAFGVDTMSIGYL
                     IEEDTPMIWRGPMATSAMTQLFNDTLWDDLDFLLIDLPPGTGDIQLTLTQKIPLAGAV
                     IVTTPQDIATLDAKKALKMFEKVEVPVLGIVENMAVHTCSNCGHVEHLFGEGGGERMA
                     AQYGVPLLGSLPLQIGIREQGDAGTPITVAQPDSVPAQAYRHAAQRLVEEVGKRPRAS
                     IPILSSLL"
     gene            14316..14888
                     /locus_tag="QEL58_002120"
     CDS             14316..14888
                     /locus_tag="QEL58_002120"
                     /EC_number="3.5.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005912996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dCTP deaminase"
                     /protein_id="HDS1676592.1"
                     /translation="MSIKSDRWIRRMSEQHGMIEPFEAGQIKQANGERIVSYGTSSYG
                     YDVRCSREFKVFTNINSTIVDPKHFDPGSFVDIVGDECIIPPNSFALARTVEYFRIPR
                     DTLVVCLGKSTYARCGIIVNVTPLEPEWEGHVTLEFSNTTPLPARIYANEGVAQMLFF
                     QAASDDVCETSYKDRGGKYQGQTGVTLPRT"
     gene            complement(14964..15131)
                     /locus_tag="QEL58_002121"
     CDS             complement(14964..15131)
                     /locus_tag="QEL58_002121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005994260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676593.1"
                     /translation="MRFNLVAAILLILIGLFMLASNLGWTHLNLSKLLLTWWPVALVG
                     VGIAMLFGRGK"
     gene            complement(15147..15569)
                     /locus_tag="QEL58_002122"
     CDS             complement(15147..15569)
                     /locus_tag="QEL58_002122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010483023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HIT family protein"
                     /protein_id="HDS1676594.1"
                     /translation="MSEFELDSRLATDSVLVAEGPLSQVRLMNDERFPWLVLVPRLAG
                     VTEWIELDGEQQDKLRTELNRACKALKGADGVEKINIGALGNIVRQLHFHVIGRHDGD
                     PAWPGPVWGSGPAHRYEPSALDQHVAYWKDRLGYPAHS"
     gene            complement(15566..16237)
                     /locus_tag="QEL58_002123"
     CDS             complement(15566..16237)
                     /locus_tag="QEL58_002123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019302061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HDS1676595.1"
                     /translation="MAEWITLDTHHGPVRAWQALPEGTPRGGLVVVQEIFGANPHIRS
                     VAERFAAEGYAVLAPSFFDLVDGPDADPDALPYSPEGVKDGLERVAALGMEKALEVVR
                     AAATRLAPYGKVGTVGYCWGGTVAMLSAVRLGLPSVSYYGARNVQFLDETPKAPVIFH
                     FGAQDKSIPPEAVQAHREKLPQMATFVYPADHAFNREVGHAYDPDSATLALQRTLDFF
                     SEHLG"
BASE COUNT         2708 a         4948 c         5541 g         3150 t
ORIGIN      
        1 cccttggccg cgctggtgcg caggtagttg gcgatggctg ccttgtcctg caggccgtcg
       61 atcgcggtca ggtcggcctt cagcggctcg atgccctgcg cgttgatctt ggcttcgtcc
      121 atgccggtgg cccacaggtc gccgacgatc ttctcgatgt ggttcgggtt cttcacctgt
      181 gcgacctgct cggccagctg gtgctgcaca gccaccgaac gctcgtcgag gatggtgaag
      241 gcgccccagc tggtgcggtc gcccgggatt tcattggcgg ccagccactt gctgttgacg
      301 tagtcgccga aggcgccaca ggcgtccttg ctggtatcca ggtcgctggg ctggaaggcg
      361 ttgtaggccg gcagcttgct ttcgtccagg gtgtactggg tggcctgggc gggggccggc
      421 gtggaggcgg tggcgtcctt ggccggggct tcagtcttgc cgcagccgac cagcgcggcc
      481 gaaacggcca gggtcagcag cacgatcttg ggagtacggg tcacttgaat ggcctccagg
      541 ccgagtgagt cagggaaggg ccgcagggcg gccgtgggcc gaacgatacg ccgccggcct
      601 gccccgcaag ggtgtcgaag gtcatggcgc ttggcaaggg tgcctgtaca ggcaccggta
      661 gggcagcaac cgggcaggat cggcacactg gccgcgcctg tccgcgccgg caggcgggtc
      721 agtgttgttc cggaatcggt tgtggctgag catcgtcggt cttcggctcc ggggcatccg
      781 gctgcggagc cacctccgga atgcgggacg ggcggcccgg ttccgcaggc agctgtgtca
      841 cgctgccgac gtcgacacgt gccacccgcg gcgtcgacca gatggtgtcc tgccactggc
      901 ggtactgcgc gggatcccaa tagcggctgt cgtagaactt ggtgccatcg atctgttcgg
      961 tggtgccgtt cggaccgggt acgaggatct tcacgttgcc ggcgaaaccg gtgcgactgc
     1021 cggtcatgcg cttctgctcg cggcgcatgg ccaacgccag gcggggttcc gcagcagcat
     1081 cgccgaagcg cgcatagacg gcttcgccct cggtcacggc ctggacccgc tcggcctcgc
     1141 tgagcgcggc ccagtagcgt tcacgcagct cgaggaagcc cttgtagcca cgctccgcag
     1201 cgagatccat ccaggcatag gccagcgggc ggttcaccgc ggtgcccgtg ccgttccaca
     1261 gcatttcggc aaccatcgcc tgtgacacct tgtcgccgta gaagcccgcg cgctggaaga
     1321 agccgaaggc cgcctgcagg tcgttggcac gctgcttttc catgcccagc atgcggaagc
     1381 gcaggtcggg atggccattg aggaatcctg cgctgatcag caacgggtct tcggtgggat
     1441 cggacggcaa cgccgaaggc gcctgggggg ccggaggcgc ggcgagggac gtgacaggca
     1501 cagccagcgc gagcagcagc ggtgccagca gggaggtgcg ggatttcatg ttcatctttc
     1561 cttgatggaa tcgtagaggc ccatggatga aaggtccttc ctggccggga cactctgcat
     1621 gcggcgttgg tcactatgcc aaaagcaagg gggagggggc gggcggcccc ctcctcccgg
     1681 tgcgctaggg gctgctggcc ccggcggcgg cgccgctgcc gatatggcga ccaaagaagt
     1741 ccagcatctt cgtatacagg ttcacgcgtg ccggcacctc gtagaagccg tgcatttcgc
     1801 cagactggat gatcacgccc tccggggcat tgccgacctc ggtgagggcc ttggccatca
     1861 gctcggtctg ctcgggcacc gcacgcacat cacgcgcgcc ggcggccagg aacaccggaa
     1921 tcttcacttc tgcggcgcgg cgggccggag aggccttggt ccactcggcg acgtcggtgc
     1981 catgggttcg acgcaggtaa cgcagtccgg attcgcgctg cggaatgtcg cccttcttga
     2041 acagcatgtc cacgtcgtat acgccgacgt agccaaaggc gcacttgaac aggccaggct
     2101 cacggatcgg cgccatcagc gccgagtaac cgccgaagct gccgccgtag atgcacagac
     2161 gatccttgtc ggccacgccc tggtcgatcg cccagtgggt cgcatcgagg atgtcgttct
     2221 ggatgccgtc ggcccattgc ttgtggccgg cttcctcgaa ggccttgcca tagccgccgg
     2281 agccacggaa attgacctgc agcaccgcgt agccgcggct ggccagcagc tgcgcttcgg
     2341 gattgaagcc ccagttgtcg cgcggtccga tcgggccgcc gtgcgggttg acgatcatcg
     2401 gcaggcgctt gccttcgctt cccttgggca gggtcagata gccgtgcaac tggcggccgt
     2461 cgcgcgcctg gaccgtgaac ggtttgaccg tggccatgcg cttcggatcg agccagtcgc
     2521 gcccctgcag caggaaccga gcctggccgc tggcgcggtc gaacaggtac agctcgcccg
     2581 gattggtgtc gctgtacacc gagagcagga tcttggcgcc atcgtcggta taactggaaa
     2641 actgcaccat ctgcccgggg aacgcgttgg ccagcgactg gtacaacgcc gcatccggat
     2701 ggtcgtcctg gaccagcgtg accttcgggc tgccggcctg attgaccacg ccgatcagct
     2761 gcttgtcgtc ggtgctccac atcagctgcg agacttcggt gaccgggtcc tggaacagtc
     2821 gcttgaactg gccggtggcc gtatccagcg tacccacggc ggccggtgcc ttgccatcat
     2881 cctgctcagc gtagaccgtg ccgtcagcgg tggtgcgcaa cacgcgcagg tgctggccat
     2941 cggacttgga tgcgttgatc agcgtccagt tgctgccatc gcgccgatag agttcgcttc
     3001 gttcatcgta ttcgccgctt tcgtcgcggc tggaactgca cacggcgaag cgcggctcct
     3061 tgccggcatc cagtgcgata tcgcagttct ccttgggcgc gcgtgccaac ggggtacgcc
     3121 ggccgctgat ggtgtccacg ctgaccacct gggttcccgc gccctcggac gagcgcgggt
     3181 agcgcacctg catgatcacg ttctggtcat cgccgcgcag ggtatcgagc agcgagtacg
     3241 attcgttgcc cacgctcttg ctgcgttggg tggcatcgcg ggtgccgtag aagatcaccg
     3301 gccgcgcctg gctgccgtcg gcgttgacgg cgaaccattc gccggtgggg aacggctgcg
     3361 catacccgcc ctgcttcttc acggcattga acatcagccg ctggggagag atccagtgga
     3421 acgcaccgac actcttcttg tcgggcagct ggttgacctt cagtaccttc agatcgctgg
     3481 tgcgcaggat ggtcagcaca tcctgttcgc ccaggtcgac gctgatcgcc aggtagtcgc
     3541 cattgggcga gatccgggcg gaattgaacg tcgcgtgctt gacgaagtct tcgatcgagt
     3601 aaggcgtgga cgacggcgcg gcaaacgtgg ccggtgacag cagcgccgcc atggctatgg
     3661 caagtggggt gaacagcttc gacatcttct gcatgggcag gttccttgtc cgctgcggtg
     3721 atcgcgttca ccgcattcaa aaaaaggaaa gcccggtaca tgcccgggct ttccatccgt
     3781 gcttacatca tccgcagatg atcagaactt gtactgcagg ctcatgtaga agcgacggcc
     3841 cagcgggtcg gcgccaatga acgggtcata gaacggatag gcggtacggc tgttgtcctt
     3901 gcggtactgg ttgtcgaaca cgttgaccac ctggaaggtt gccagcacgt tctcgccgaa
     3961 cttcttgcca acgctcaggt tccacaggaa gaacggcggc aggcgacgcg ggtagtagcc
     4021 gcccgcgctg ttggtgcccg ccgtgtcaag gctgctgaat gccgagccgt agcgggtacc
     4081 gaacacggtg gttgcccagt cgcccttgga ccaggtgacg ctgccgcggg cgcggctgcg
     4141 ttccgggttc cagtactccg gcggcagatc gcggtagtcg atcagcggct catccttcag
     4201 ctgcttgtac ttgttggtca gggtcagcga atagcccagg tcgaagttga agcgacccca
     4261 gcgatcggtg tccaggttgt acttgtagct ggcatcgatg ccgctggtgt cctgcagcgc
     4321 ggtgttgatg taagcattgt tgatgcggct gatgcggccg ttgtccggag cgtccggctg
     4381 gttgacgcgg gtgatcaggg tcgacagctg cgagcacagt gcagcgctcg gcatcgggcg
     4441 cgacgggtcg ctggtgctgc ccaggcggca ggcggcgtcg gagcgcagca ggtagtcgtt
     4501 gctgagctgc gcagcggcgt cttccaggcg gatgcggtag tagtcaaccg tcagcgacat
     4561 gccatcggtc acgtcccaca cgaagcccgc gccccacgac ttgcccttct cttcggtcag
     4621 gttggggttg cctgccacca gggtctgcac cgagtacttg gtcggatcgt tggcggtggc
     4681 attacaggcg gcacgggtac gcggaccctg cgctgcgccg gcaccggtac ccgagcggca
     4741 cgcatactcg tcgagctcgg tggtgtagga cgccgcaccc tgtgcgtaga tcagctgcat
     4801 gtccggggcg cggaagctgg tggcgtagct gccgcggacc agcaggttgc tgaacggacg
     4861 ccattccagg ccgaagttgt aggtggtggc cgcatcgacc gacgagatgt cgtcgtactt
     4921 gtcatagcgg gccgcggcgt tggcgctgag gctgctgaag atcggcacgc ggaactccgc
     4981 accaatggcg tagcggtcgc gggtaccgtg ggtttcgccc gagctggtca ggttgtagat
     5041 ggtctggctg tcgatcggac gcaactgatc ggtgcgcgga tcgctgacca tgtccatctt
     5101 ctgccggttc cattccagca cacccgcgaa gccgagggcg ccggccggca gatcgaacag
     5161 atcgccactg acgttgaagt tggcgttggc gacgctggtc tccgaacggt tgatcacgcg
     5221 cgtcgagaac gagcggtaga tgtccggcgt gatcggcgac gtccagcgat cctggttcaa
     5281 ggcgtagacc ggatagatcg cgttgccggt ggtaccgccg gtggagttga ggtagcccag
     5341 gcgtgggccg aggaagtagt catgcacggc ctgcgcgagc aggcgcgggc ggtccatctt
     5401 gtagtcgtag tagccgtaac cggcgctggc ttcccagtcg aagcggtcgg cgaagttgcc
     5461 acgcacaccg acgttgaagt cgtaggtgta ctcgtcatac agggtgctgg ctgcttcgtt
     5521 gccgcccagc tcctgcggag tgaagatgcg ctgcagcgac accatatcct tcaggttcgg
     5581 gtcccagaag tactgggtgg ctgcaccggc actggtctgg ttgaagcggt cgcccgacgt
     5641 cgcccagaac tccgtacccg cgctggcctt ggccttggtg gtgtagtagt tgacgctggc
     5701 gaagccctgg gtggtatcgg tgaagtcgaa ggtaccgtaa ccgtaggccg agtagaactg
     5761 gcgcttgttg gagatcgaac gggcggcgtt gctggtgtat gagccgcagt acttgccgcg
     5821 ggacgcggtg gtgaccgtgt cgaagcccag tgcgtcgcac ttctcctggc ctgggtacag
     5881 gacgttgtgg ttgagcgggc cattggcgga ggccaggcca cgaatgacgg ccatcgaaag
     5941 gttcggggtc gccgtactgc ccagcggacc ctcgcgcagg tcggacagcc acttgcgctg
     6001 gctggcgaac accggctcgc ggtcgctgta ctgcagcgcc cacaccgcgc tccagcggtc
     6061 accggtacgg ccaccggtca gttccacgtt gaccgtgtca ccgccgcctt cggcagtcgt
     6121 gccggcggtc acgcgcacca ggttgccgtc gtagtgctca cgcagcacga tgttgaccac
     6181 gcccgccacg gcgtcggagc cgtaaatggc cgatgcacca ccggtcagca cttccacgcg
     6241 ctcgacgatg ctgctcggga tcgagttgat gttggcgacg ttgttgtcgc ggttgtacgg
     6301 ctgcgggtac tgcgccgggc ggcggccgtt gaccagggtc agcgtgtagc cgggacccag
     6361 gttgcgcagg ttgaccacct gggcattggg ggtgaagccg gtaacggcca ggtcgccggt
     6421 gaaggacgac gtggtgttct gggtcagcgt ctgcagcatg tcaccgacgg tctggaaacc
     6481 ttcgcggtcg atgtcggtgc gggtgatcac ggtcaccggc gccgggcctt cgacatcaga
     6541 gcgcttgatg cgtgagccga ccaccgagac gcggtcgaga ttggttgcgt tcttgccgcc
     6601 tgcttcgttg ccagcttcct gggcgaaggc cggagcgatg ccggtggcca gcagggccgt
     6661 ggtgagcgca aagctcagcg ggtggcggct gagcgccttg cggatggtca tgtgtagatc
     6721 ccctgatgaa tcaaacatcg gtcggctccc tggaggcttg ccgccgtccc tgatgggctg
     6781 tagcccactt ctcaccggct tcacaagccg atgaaccaaa gttaacacag acttaacttg
     6841 gcctgtcaac tgttcatgcg gccgtcatga agccaaggta ggcaaagcct tgatttctcc
     6901 gcgatttctt cgcaactcat tgatatgaaa gaagttgcaa agccttcctg aacgggcggc
     6961 ctggaccgtc gcttgcttgg gtgcgggaac gttgcgttca gggaacagaa gggaaaaggg
     7021 gccgctggca agaagacccg tgccttgggc acggggcagg gcgggtagac ggtctctgtc
     7081 gccacccggt acgaacagtg atgcagttcg cacttgccgg gtgcaggaaa ggacggaccc
     7141 cgccgaagcg gggtctcctc tggcacggca gggcgcctta cttcgcgccg aagtcgtact
     7201 gcgcctgcac gtagatcgcg cgcccgtagg cgttgtacag ggcgttgttg tacggcacgt
     7261 cgatgttgcc cgcgtaggag tgctgctggt tgtccggcac cttgttgaac aggttgttga
     7321 ccatcagcga gaacgtcagg ttgtccatcg cgcggtagtt cacgctcagg ttgtacgtgg
     7381 tgtacgagcc ccacttgccg gccttgtagc cggaggtcgg gtcaacgtag tcgtagccgc
     7441 gtcccacgta ggacatgtag ttgggcgtgc ggccgatgta gttgaagtac agcgtggtgg
     7501 tgaacctgtc gattgcccag cccaccgagc cgtcggcccg gaccttggca taggagtcgt
     7561 acacccacat cgcatacggg ttgcccagca ggtccaggaa cgggtcgttg agctgcggct
     7621 gcagttcacg cttgagcatg ttggtgtagt tgctggagaa ctgcagcgag ccgaagcggc
     7681 cgatgtcctg cacgtacttg aaactggcgg tcaccgcttc caggttctgc cgtgccacgt
     7741 tgagcttcgg cgtgtagatt tcctccagcg caccggtggc atcacgggtg acccagttgg
     7801 ccacatcctc gcaggaggca ccggcggtgt tggacaggcc gttgcggcag tagtactcgg
     7861 ccagcagcaa ctggtcggaa ctgagggtgt tgacctcgtt cttgatcttc cagttgtagt
     7921 agtccagcga cacggagaga ttgctgatcg gcgcccagac caggcccgcg ttccatacgt
     7981 cggcagtgat cggcttcagc tccggattgc ccgactgcgt gccgaacacc gacacgctgc
     8041 cgtagcggca atcgaccgtg ttggacggat cgaaaccgag ctggccgcag cggtagtaat
     8101 ccttggagcc attggcgtag taaccgctct tgccctggaa ggcgtcgggc agggagggtg
     8161 cgcggaacgc ggtgccgtac ttgccgcgga ccagcaggct ttcaaacgga cggaactcca
     8221 ggccgatgct gtaggtcggc ttgtcgacgg tatgcccggc aatcttgaag ttgtcgtagc
     8281 gaccggaggc ggtgaccgtc agcatgtcgt gcaggggcag gcgcagttcg ccggtcaccg
     8341 catagttgct gcggtggccg ttgcccgcca cggcggtggt ggcgaacacc gtgccgtcgg
     8401 tcaggcgcgc atccggggtg taggtccagc cttcgctgcc gccttcaatc acggcggcga
     8461 atccggcgtc gccgccgggc agcttgaaca gcgaactgtt ggtgagctgg gcgcgggtct
     8521 gggtctgcca ggtgcggctg cggctggtgg tgaaaccggt gaagctctgg aaagcgccct
     8581 ccggcagctt cgaatagaag gcaccccagt tcgggttgta gatgttgtag ccgtcgtcgg
     8641 tctcacccag caccgggccc agcacgttgt cggcgaacca gttgttgatc gggtcgttcc
     8701 agcgcgcgta gccacgctcg ttcagcttgt actcgccgcg ggtgatgctg gcctcgtagt
     8761 cccagttgct gccgatcgca ccgcgtgcgc ccagcgtgac ctggtaggac ttgctgcggt
     8821 cggtattcat gatgtcgcgg tagccgccac cgccgatgtc ttcgggggcg aacacgcgct
     8881 gcaggccgag atagcggcca ctggactgat cgaagaacgg acccatgctg atgtccgtgc
     8941 cccagtagtt gtagccggaa ccggtgttgt acttgacggt ctcgtagctg tagagcacat
     9001 cgccgaacag ctgcaggttg tcattcacat cgtaggtcag cgccgaatag aactggctgc
     9061 tttccttgct gttcttgatc gtcttgtagc cggcgccgaa cgccgagccg caggactggc
     9121 ctgcccggcg cgtgcccagg atggtggtgc catcgaactg cccggcaacg ctggcgcagt
     9181 tgctcggatc catcatcagg aagtcatcgg tgtcagcatc gaagaccagg aagtcgttcg
     9241 agggcagctg gcgggtatag ccgcgcggat tgttctgctt ggtgatgtcg cgctggtagc
     9301 cccagatcgg gttggtcttc tcgtactgca cgttgaccag cgcgcggaag cgatcatcgc
     9361 ggctgttgaa gccatttgcc ccgctcaccc ggaagctggc gccgccacca tccgaatagg
     9421 cgccgccacg gacattcagc gtgccgccgt ccatgcgctc cttcaggatg atgttgacta
     9481 cgccggcaat ggcgtccgaa ccgtacagcg acgactggcc gcccggcagg acttcgatgc
     9541 ggtcgacgat atcgatcggg atgccgctga tgttgttgaa cgcgtcgctg ccgttgtaca
     9601 gcgccgggta ggacaacatc gggcggccat tgatcaggta cttggtgtag cccgggttga
     9661 ggccgaacat cccggccgct tcggcgccct gggtgaacga tgcggaggtc tggccgccct
     9721 gcaggccgcc agtagtgagc gaggactgct gcagcacttc ggcaacgctg gagaagccgc
     9781 gcgcctggat cgcctcggcg ctgatggtca gcaccggcgt ctggttttcg atctgggtct
     9841 gcgggatcag cgaaccggtg acggtgaccc ggtcgaggtt ggtggctgca ctcttgctgt
     9901 cctgcgcgag cgcgccggtg ctggcgctgg caaggaacag gccgctgagc acggcgcagg
     9961 tgagcggatg gcgtgggaac aagaagcgac tgcgagacat gcgattactc cgtgtgatcg
    10021 taagaacgcg tttccccttc ccggggctcg atttctgtcc ggccgctctg caggcatgcg
    10081 gggcggtgtg cctgaaacct aacatgggct taacttgaaa tgcgcagatg tgtaaccgca
    10141 tttgactggc tttgtcacag ttctgtggat gtgttctttg aaaacaacaa tttgcggata
    10201 ttgtcctgtt ttgctgaatc tggcgaaatg aatgaatgca aaatgatcgg tcattaacaa
    10261 tcgggacgcc ctttcatttt ctgaccggtt ttcccaggca aaaaaaaagg ccccgccgaa
    10321 gcggggcctg gtccagacac gaagtccgga aaacgacggg atcagaagtt gtacttgacc
    10381 tgggccgaga tctggcggcc gtagacgctg tagaagccgt cattgaacgg ggtcgattcg
    10441 ttacccgggt agttgtagcg ctggccttcc ggcagcttgt tgaacacgtt gttgaccatc
    10501 agcgacagca ccagatcgtc ctgtgcctgg tagttcatgc tcaggttgta cgtggtgtac
    10561 gaaccccact tgcccgcctt ggcgccggaa gagtggacgt agccgtagct gcggccggtg
    10621 taggccaggt agttcggggt gctgccgacg tagttggcgt acacggtggt ggtgaacttg
    10681 gcgatgttcc aggccaccga cagatcgcca cggaccttgg cgaagttgtc gtagtaccac
    10741 atgttgtacg gatcgctcag caggtcgagc ttggcggcgc ccggcatcgg ctgcacttca
    10801 cgcttcagca tgttggtgta gttgccggag aacatcagcg agccgaagcg gccgatatcc
    10861 tgctggtact tcgccgccac ggtcaccgct tccaggttct ggctggcaac gttcagcttc
    10921 ggcgtgtaca cgcgggtcag gttgccaccg gcatcgcggg acacccagtc ggtcacgttc
    10981 tggcagctgg ccgaggtgtt gttcggcagg ccgttgtggc actggtactc ggccagcagc
    11041 agctggtcgg tgctcagggt cttgacctcg ttcttgatct tccagttgta gtagtcggcc
    11101 gacagcgaga agttgctcac cggggcccac accacgcctg cgctccacac gtcggcggtg
    11161 atcggcttca ggtccgggtt gccggacttt tcgctgtaca ccgaggtgtt cttgtagaac
    11221 gagcaggcct cgtcacgcag cgcgtagccc agctggctgc aacggtagta atcgttctgg
    11281 ccggacgagt acgagccgct catgccctgg aacgcatcgg acagggtcgg tgcacggaag
    11341 gcggtgccgt acttgccgcg cagcagcagg ctttcgatcg gacggaattc caggccgatg
    11401 ctgtaggtgg ccttgtcgac ggtcttgtcg gcgatcttga acgcgtcata gcggcccgag
    11461 gcgctgacgg tcagcttctc gaacagcggc atgcgcagtt cgctggtgac cgcgtagttg
    11521 ctgcggtgac cggcgccggc gacggcggtg gtgccccaca cgttgccatc gatgaaggcc
    11581 tggtccggcg agtagtccca accttcgctg ccgccttcca ggacgacggc caggccggcg
    11641 tcgccgcccg gcaggctgaa cagctagccg ttggtcacct gcacgcgacc caggttctgc
    11701 caggtcttgc tgcggtgggt gccgtagccg gtgaagctgg cgaactggtc cggggtgatc
    11761 ggcgagtaga acgcagcgta gttcgggttg tagatgccga acgtggcagt cgggtccttc
    11821 gggtcggtgt aggtgcccag gcgcgggccc agcacggtct ggccgaagaa gtcctcgatc
    11881 ttgtccttga agcgcacgaa gcggttctgg tccaggcggt attcgccgcg ggtgaagctg
    11941 gcgctgtaat cccagtcgcc gaccatgccc ttgccgccca gggtgacctg gtaggcgcgg
    12001 ctctcatcgg agttcaggat gttgttgtag tggcccgggc cgatttcttc cggtgcgaag
    12061 gcgcgctgca ggttgacgac cttgccgatg ccctggtcat agaagccacc catgaccgac
    12121 ttggtgcccc accacagggc gctggagccg gaggtgaatt cggtcttttc cttgctgtac
    12181 agcacgtcgg cgaacagctg gaagttgtcg ttcacgtcga aggtcatcga cgagtagaac
    12241 tggccgctgt tcttgccgtt cttcagggtc ttgtagccgg cgctgtacac cgaaccgcag
    12301 gactcgcccg aggtgcgctt gccgacaacg gtggtgccgt cgtacaggcc tgcgacgttg
    12361 gcgcagcggc tcggatccat catcagcagc ttgttgtctg cgttggtgat gacggcgaag
    12421 tcgttcgacg gcacctgtgc ggtgtagccg accgggttgt tctgcttggt gatgtcacgc
    12481 tggtagcccc agatcgggct gccgttttcg atctgcacgt tgaccagcgc gtggaagcgg
    12541 tcgtcgaacg cgttgaagcc cttggctgcg ctgaagcgga tgttgctgcc gccgccttcg
    12601 gtgtaggtgc cgccacggac ggtcatcgtg ccgccgtcca tgcgctcctt caggatgatg
    12661 ttgaccacac cggcgatggc gtccgagccg tacagcgagg actggccacc cggcagcact
    12721 tcgatgcgct cgacgatgtc gatcggaatg ccgctgatgt tgttgaaggt gtcgctgccg
    12781 ttgtacagcg ccggatacga gagcatcggg cggccgttga tcaggtactt ggtgtagccc
    12841 gggttcaggc cgaacatgcc ggctgcttcg gcgccctggg tgaacgaacc cgaggtctgg
    12901 ccgccctgca ggccgccggt ggtcagcgac gactgctgca gcacttcagc aacgctgctg
    12961 aagccgcggg tctggatgtc ttcggcggtg atggacatca ccggggtctg ggtttcaacc
    13021 tgggtctgcg ggatcagcga accggtgacg gtgatcttgt ccaggttggt cgccttgtcc
    13081 tgggccattg ccggggcggc ggccatcaga gcggaaatca gggcgacggc gagcgtgttg
    13141 cgacgtgcgg tgttgcttac gtatttcatg tagttccaat agagagcaga aacaaaaatc
    13201 ggcactgcgc atgcgccatc gtgcgtgctg gagaccagcc ccgcagccca aaacagtgct
    13261 tcaggaacgt aacatgaact taacaatctg tgcacgaatc cgtagcaatc ctgaatttca
    13321 gtcaggctac gtccagcttg tatgatgttg ggttatcccc cctgattccg ctggtgcccg
    13381 ttgtgaacag ttctctccgc cgtccccatg ccagccaggt ccagaagggg ctgacgccgc
    13441 atgcccgcat ccgcaacgtg atcgcggttg gttcgggcaa gggcggcgtc ggcaagtcga
    13501 cgaccgcggt caacctggcc gttgcgctgc agcagttggg tgcgcgtgta ggcgtgctgg
    13561 atgcggacat ctacggtccc agcgtaccgg ccatgctggg cctgtccggc cgtccggaaa
    13621 gccctgacaa caagagcatc gagccgctgc gcgcgttcgg cgtggatacc atgtcgatcg
    13681 gctacctgat cgaagaggac acgccgatga tctggcgtgg cccgatggcc acctcggcga
    13741 tgacccagct gttcaacgac accctgtggg atgacctgga cttcctgctg atcgacctgc
    13801 cgccgggcac cggtgacatc cagctgaccc tgacccagaa gatcccgctg gccggtgcgg
    13861 tgatcgtcac cacgccgcag gacatcgcca cgctggatgc gaagaaggcg ctgaagatgt
    13921 tcgagaaggt cgaagtaccg gtgctgggca tcgtcgagaa catggccgtg cacacctgca
    13981 gcaactgcgg gcacgtcgag cacctgttcg gcgaaggcgg tggcgagcgc atggccgcgc
    14041 agtacggcgt gccgctgctg ggctcgctgc cgctgcagat cggcatccgc gagcagggcg
    14101 acgccggtac cccgatcacc gtcgcccagc ccgattcggt gccggcccag gcctatcgcc
    14161 atgccgcaca gcgcctggtc gaggaagtcg gcaagcgccc gcgcgcgtcg atcccgatcc
    14221 tgtcttcgct gctgtaaatg cctgcgcagg ggccgccggc cacgcccggc cccctgctag
    14281 aatcctcgcg ccccctcgca ttcccaggac aaagcatgag catcaagagt gaccgttgga
    14341 tccgccgcat gtccgagcag cacggcatga tcgagccgtt cgaggccggg cagatcaagc
    14401 aggccaacgg cgagcgcatc gtcagctatg gcacctccag ctatggctac gacgtgcgct
    14461 gctcgcgcga attcaaggtg ttcaccaaca tcaactcgac gatcgtcgat cccaagcact
    14521 tcgacccggg cagcttcgtg gatatcgtcg gcgacgagtg catcatcccg ccgaacagct
    14581 tcgcgctggc caggaccgtc gagtacttcc gcatcccgcg cgacaccctg gtggtttgcc
    14641 tgggcaagag cacctacgcg cgctgcggca tcatcgtcaa cgtgaccccg ctggagccgg
    14701 aatgggaagg ccacgtgacc ctggaattca gcaacaccac gccgttgccg gcgcgcatct
    14761 acgccaacga gggcgtggcc cagatgctgt tcttccaggc ggcatccgat gacgtctgcg
    14821 aaacgtcgta caaggatcgt ggcggcaagt accagggcca gaccggcgtg accctgccgc
    14881 ggacctgatg acggtgggcc gtttgtggag ccgagccatg ctcggctcta catgaaggaa
    14941 ggcggcgcaa tgcgccgcct tcgtcatttt ccgcgaccga acagcatggc gatgccgacg
    15001 cccaccagtg ccaccggcca ccacgtcagc agcagcttgg acaggttcag gtgcgtccag
    15061 ccgaggttgc tggcaagcat gaacaggccg atcaggatca gcaggatggc ggcaacgagg
    15121 ttgaatcgca tcgggtcggc gaaggctcag gagtgggccg gatatcctag ccggtccttc
    15181 cagtaggcga catgctggtc cagtgccgac ggctcgtagc ggtgtgccgg gccgctgccc
    15241 cagaccgggc ccggccaggc cggatcgccg tcatggcggc cgatcacgtg gaaatgcagc
    15301 tggcgcacga tgttgcccag cgcgccgatg ttgatcttct ccacgccgtc ggcgcccttc
    15361 agggccttgc aggcgcggtt gagctcggtg cgcagcttgt cctgctgctc gccgtccagc
    15421 tcgatccact cggtcacccc ggccaggcgc ggtaccagca ccagccaggg gaatcgttcg
    15481 tcgttcatca gccgcacttg cgacaacggt ccttcggcca ccagcacgct atcggtggcc
    15541 aggcgtgaat cgagttcgaa ttcgctcatc caagatgctc cgagaagaag tccagggtgc
    15601 gttgcagcgc cagggtggcg ctgtctggat catacgcatg tccgacctcg cggttgaagg
    15661 catgatcggc cggatagacg aaggtggcca tctgcggcag cttctcgcgg tgggcctgca
    15721 ccgcctccgg cgggatgctc ttgtcctggg caccgaagtg gaagatcacc ggggccttgg
    15781 gcgtctcatc gaggaactgc acgttgcgcg caccgtagta gctgaccgag ggcaggccca
    15841 ggcgcactgc cgacagcatc gccacggtgc cgccccagca gtagccgacc gtgccgacct
    15901 tgccgtaggg ggccagtcgg gttgccgcgg cgcggaccac ttccagtgcc ttctccatgc
    15961 ccagcgcggc gacccgttcc aggccgtcct tcacgccctc ggggctgtag ggaagggcgt
    16021 ccgggtcggc atcggggccg tcgaccaggt cgaagaacga cggcgccagc accgcgtagc
    16081 cctcggcggc gaagcgctcg gccacgctgc ggatgtgcgg gttggcgccg aagatttcct
    16141 gcaccaccac cagcccgcca cgcggggtgc cttccggcag ggcctgccag gcccgtaccg
    16201 ggccgtgatg cgtatccagg gtgatccact cggccatcgt catcttcctc gttgcaggga
    16261 acagggctgc attgtcggcg ctgcgcgggt tagcggcgtg tcagcggctg tgcgggatcg
    16321 ggcggctggc cgttcagagc gcggcgc
//
LOCUS       DAOKIP010000079        16292 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.079,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000079 DAOKIP010000000
VERSION     DAOKIP010000079.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 16292)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16292)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16292
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.079"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(12..1331)
                     /locus_tag="QEL58_002124"
     CDS             complement(12..1331)
                     /locus_tag="QEL58_002124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014038312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dicarboxylate/amino acid:cation symporter"
                     /protein_id="HDS1676596.1"
                     /translation="MTAAAADKKKLPLHWKMGIGFAIGLVLGLTVHALGGSVEGLQGG
                     AKWVMDYVTTPASGLFLNLIFMLIVPLIFSALIMGVSEMGDIRALGRIGWKTLAYTVL
                     LSGIAVGIGLVLVNVLKPGAGVDPQVAAMMLSENAERSKEIVAGIHGTPKGMDMLLSI
                     VPSNVLQAASDNGAILSLMFFALMFGIGMVLTDNEKVAPLRRAIEGVFEISMTLINLV
                     IRLAPYAVACFMFNLAALFGFELIIRLGAYVGVVVLALGLHMIVTYGTAVWLSGRSPL
                     SFFRDTQEATVMAFSTASSNATLPTALRVADQMGLPQRVSRFVLTVGATANQNGTALF
                     EGVTVIFLAQFFGVDLSIGQQFMVMAVCILGGIGTAGVPSGSLPVVAMICAMVGVNPL
                     GIGLILGVNHFLDMCRTALNVTGDLALTTLVAKGESHDGPALGPQQD"
     gene            complement(1389..3104)
                     /locus_tag="QEL58_002125"
     CDS             complement(1389..3104)
                     /locus_tag="QEL58_002125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014038313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BatD family protein"
                     /protein_id="HDS1676597.1"
                     /translation="MTRAINMHGRWPRQVLAALLLWLPLLAWAQPRAWLDRDRIAMGD
                     TVTLNVESDQGAPDFTPLRTDFDLSAQTSSRQVEWSNGSMQQRNLYGVALTPRRSGAL
                     VVPGLQVGSVRTAPLTLQVDAAAVAGPDSTAMAFIETVVDDETPYVQQSVGVVVRLYF
                     ASQLASGELVLDTPAGASLQRVGDDRTDVRQVNGRRYNVVERRFLLIPERSGALRLAG
                     ARFSGRSAGGFFDDFFGGGDGRMNATGADRTLQVQAQPAQAPQPWLPLQSLQLRYTSA
                     PTSARTGEAANVVVEAVAEGATRAQFTDLPVPDVGANAQVFAEPAQYEETFNGSTPRL
                     KITRRYSIVPRQPGSLVVPGPRLPWWDVRSGKAQEATLPDLTLAVAAGNGGGNTPPAP
                     LPPIDTDAALPGTDGQDSRIAATDPRASGVAERPWPWMGAAIGLTLLWLLTLLWGWQR
                     GRRPRAAAPVAGTSAVPTVASGRAGLAELRRVLDGEGFDQVEAQLCAMAGVERIEQVI
                     ARLDDPEQRQVLQDLQQARWGGQGDLAALRTRLRAAFRDGPHWSAAAGAADTGLAPLY
                     PPRRT"
     gene            complement(3101..4936)
                     /locus_tag="QEL58_002126"
     CDS             complement(3101..4936)
                     /locus_tag="QEL58_002126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019338743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HDS1676598.1"
                     /translation="MIALASNLPDWNALHFLRPEWLWALLALPVILALALYRQRRSDA
                     WRQAVDPHLLPHLLAAGTRRRTRLPWALLLGWTLASLAMAGPSWRQQAQPMFQASAPL
                     LVVLDLSSRITATDLPPSRLLQARAKLGELLRARKGGQVGLVVYADDAYTVAPLTDDG
                     SNVALYLDALSPEVMPRDGQRADRGIDWAAQLMRQVAALQGQVLLVTDQADGEAALAA
                     AQARSLGLQVSVLGLGTPAGAAYRDGSGQIRQAALDEGSLRAVATAGGGRYARIAADD
                     SDLRALGVLDAREGTAAQRPGEGKQWRDEGFWLLPPLMLLALLAFRRRAVLAAVLAVG
                     LLPWMGDVQAQASAPPPAQGTLWKRADQLQHQRLAEGVQAYRNGDFANARKQFEGIDS
                     DAGWYNLANALARQGNYDEAIAAYDRALALHPGMADAVANRAVVDAARKRKPSGGQGQ
                     GQDQQKPQQSGPQKQQNDSQGKQNPSGQQPQQGQQNPGQGQPQSGQQDPPKAGDNNAQ
                     SKPQPGERGRDGQQAPPQVEDAKAQAQADEQQRQRMQQAMQKAREGKGEQDGKPVPGS
                     EGTTPRQREEQQAVEAWMRRVPDDPGALLRAKFQLENERRKREGR"
     gene            complement(4933..5937)
                     /locus_tag="QEL58_002127"
     CDS             complement(4933..5937)
                     /locus_tag="QEL58_002127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010484069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HDS1676599.1"
                     /translation="MNLLASYWPWPDLQLAWPLALLALPLPLLMYAWKRRADPGAALR
                     VPYAASELEALTGGGRVDVSWLRTLLLWLGWCALCVALARPQQLGEAITPPQQGRQMM
                     LAMDVSGSMGEGDMVLGGQAVDRLTAAKAVLADFLDRRAGDRIGLLIFGDRAYTLTPL
                     TADLASVRDQLRDSVVGLAGRETAIGDAIGLAVKRLRSQPEGQRVLILLTDGVSNAGV
                     LEPLRAAEVARAEGVRIHTVAFGGDGSMRVFGISISADQDPVDEATLKKIAGMTGGQF
                     FRARDTAQLAGIYAELDRLEPIAAKGPSLRPREERYAWPLGLALLLGALAWLWPERRR
                     "
     gene            complement(5934..6383)
                     /locus_tag="QEL58_002128"
     CDS             complement(5934..6383)
                     /locus_tag="QEL58_002128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010484068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4381 family protein"
                     /protein_id="HDS1676600.1"
                     /translation="MSANLPLRDVQLPPAPPWWPPAPGYLMIGAAVLLLLSVVAFVWW
                     QRRRRRQRWLQQFDRELAACTDAVAELAAIAGLLRRAARQARPGSESLRDDAWWQRVD
                     PQGTLSDARRSLLAEGAYRPRVDASEVAAVRSWSRARYLAMLVERRR"
     gene            complement(6380..7309)
                     /locus_tag="QEL58_002129"
     CDS             complement(6380..7309)
                     /locus_tag="QEL58_002129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010484067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF58 domain-containing protein"
                     /protein_id="HDS1676601.1"
                     /translation="MTDPSPAPASMASEGDGLRPQLAELVALRRLAQRPPPPRRGRAG
                     NAGQAPSPLRGRGMEYAESREYVAGDDARHIDWRVTARTGRAHTKLFQAERERVSLIV
                     ADTSPALYFGTRVRFKSVQAARAGAVAAWSAQRRGDRVGALRGSDREPPVAPAGGPRG
                     VLRVLDALTRWYAQPPTDDLGLERALDHASRVLRPGARMLVLADPQQAARIAPVRWSA
                     LAQHHDLSLVLLVDPLELQPPSAALQFQTAQQRIGLDLRRSDVQAHWHAHFVEPLQEL
                     RRQLGARRVDVQVLSSDAPSDAWLAPVPTEVPA"
     gene            complement(7318..8343)
                     /locus_tag="QEL58_002130"
     CDS             complement(7318..8343)
                     /locus_tag="QEL58_002130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017166368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MoxR family ATPase"
                     /protein_id="HDS1676602.1"
                     /translation="MNLPPPMPETVPPPPAPASSRLHAAFSQLRDALSAEIVGQSALV
                     ERLLIALLADGHLLVEGAPGLAKTTAIRALAARLETDFARVQFTPDLLPADLTGTEIW
                     RPQEGRFEFVPGPIFHPILLADEINRAPAKVQSALLEAMGERQVTVGRHTYALPSLFL
                     VMATQNPIEQEGTFPLPEAQLDRFLMHVRIGYPDQAAESEILRLARERARGALGEAAP
                     APEKLPMQDVFAARREVLDLHMAPALERYLIELVLASRDPSRYDAGLGRRIAWGASPR
                     GSIALERCARARAWLAGRDFVTPDDVRAVAADVLRHRVLPSYEATAEGWDGERLVQEL
                     LARVPAP"
     gene            complement(8511..10475)
                     /locus_tag="QEL58_002131"
     CDS             complement(8511..10475)
                     /locus_tag="QEL58_002131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006388908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus secretin PilQ family protein"
                     /protein_id="HDS1676603.1"
                     /translation="MTFHQAKGLRPIRRSTLNRVSALGVALMLACAPALAATPAEKPA
                     GATVAAAVAPTGLSVAKIDFKRGDDGAGRLIVQFDGQGAVPDLRTQGNSVVVDVGNAR
                     LPANLQRPMNVTDFATPVQRIDAKPSGAGTQLVLSTGGAVDSLAYQSGNEYVVEISPR
                     QAPAAVGAVTAGSVAQAAKAVGQRGFTGKPVTFNFQDVPVRTVLQLIAEESNLNVVAS
                     DSVQGNVTLRLVNVPWDQALDIVLRAKGLDKRRDGSVIWVAPQAELAKFEQEKEDARI
                     AIENREDLVTDYVQINYHSATQIFKALTEAKGIGGGGGNGSSGGSASQEDSGFLSSRG
                     RIVADERTNTLMISDIPKKIARMRELIGVIDRPVDQVLIESRIVIATDTFARELGAKF
                     GISGSRDNVYFSGDLEANRKTRLSQADTSAANAKAYRDWEAGGSVGPAPVPLLPAITR
                     GLNFNLPAASTATPGSLALSILNAGYLLDVELSAMQEEARGEVISNPRVVTTNQREAL
                     IKQGKEIGYVTISGGGTGGVATPNVQFKEVVLELKVTPTITNDNRVFLNMQLKKDEVE
                     RLIQLQGYGTVPEINRREVNTAVLVDDGQTVVIGGVYEFTDRSSVSKVPFLGDVPFLG
                     NLFKKRGRSKDKAELLVFVTPKVLRVAKQN"
     gene            complement(10497..11030)
                     /locus_tag="QEL58_002132"
     CDS             complement(10497..11030)
                     /locus_tag="QEL58_002132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006465989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein PilP"
                     /protein_id="HDS1676604.1"
                     /translation="MRTYIARGAMALAVLLLAACGRGVTSTPGDAPNLEKWVEGERAR
                     PAQPLEPLPVMQQFETFEYSAQGMRDPFTDAWTNPQQGNGGLRPDPNRRKEPLEGFPL
                     DALDMVGTIGTGAGVVALVMGPDKVTYRVRPGGYLGQSDGRITAVFEDRVELIELVPD
                     GAGGWLERPATLSLEDQ"
     gene            complement(11030..11704)
                     /gene="pilO"
                     /locus_tag="QEL58_002133"
     CDS             complement(11030..11704)
                     /gene="pilO"
                     /locus_tag="QEL58_002133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008268772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 4a pilus biogenesis protein PilO"
                     /protein_id="HDS1676605.1"
                     /translation="MSQKIDLKNLDFNDIGNWPQKAKIVFCSVLALVIMFLAWMLLIS
                     GKREELAGLESKEVELRSEFTKQQERAVNLAPLKQQLAQMEQVLQQMLRQLPSKTEMP
                     DLIIDISQTALSSGLANELFEPEQEQVKEFYAEKPIKLRMVGSYHQFGAFVSGVASLP
                     RVVILTMHDINLKPKDKSKGNVRSGALELSGTVKTYRYLDETEVQAQQAAADAEAKKK
                     GKGGKK"
     gene            complement(11701..12594)
                     /locus_tag="QEL58_002134"
     CDS             complement(11701..12594)
                     /locus_tag="QEL58_002134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilN domain-containing protein"
                     /protein_id="HDS1676606.1"
                     /translation="MARINLLPWRAERRKQRQREFYAMLGMAAIGGLLLSLLIWFYYD
                     RQVSGQMDRNAYLSAEIEKVKEQNKEIDRLDAQKERLLARKKVIEELQAKRSQMVHLF
                     DALVRTIPDGVVLTALKQEGDVLTLEGRTQSNARVSAYMRNLDTSGWMTNPELSIIEA
                     REPEKDKDGKTGPVTDIKALPYVFVVKVKLPAQSEEVAATPGLNADGTVVSAPPAAVA
                     PLAAGPDAAAPATPAAPAAAPAANAQAPAPAAPATAPAAAPAKPNQPAAPAAKPAPKP
                     EGSRLVQPPQAFIAPLQGDRA"
     gene            complement(12594..13676)
                     /locus_tag="QEL58_002135"
     CDS             complement(12594..13676)
                     /locus_tag="QEL58_002135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007974443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein PilM"
                     /protein_id="HDS1676607.1"
                     /translation="MPVGRGETVGLIPKSQSPLVGVDISSTAVKLLQLSRSGNRFRVE
                     HYAVEPLPPNAVVEKNIVEVEAVGEAIRRAMNRSGSKAKLAAAAVAGSAVITKVIPMP
                     AELDENDMEAQIELEAVNYIPYPIEEVNLDFEVIGAIPNNPEMVQVLLAASRSENVEL
                     RQSALELGGLQAKVMDVEAFAVENAYALVASELPVSIDGVVALVDIGATMTTLNVLRG
                     GRSLYSREQVFGGKQLTDEIMRRYGLSYEEAGLAKRQGGLPESYEMEVLEPFKEATVQ
                     QISRLLQFFYAGSEFNRVDHIVLAGGCAVLGGLPEMVEEQLGVPTVVANPLAQMTLGP
                     KVNAHALAQDAPALMIATGLALRSFD"
     gene            13872..>16292
                     /locus_tag="QEL58_002136"
     CDS             13872..>16292
                     /locus_tag="QEL58_002136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 1A"
                     /protein_id="HDS1676608.1"
                     /translation="MTRLRRWLRWIFLIVLVLALIGAAAVGGLYYAVSSKLPDVQTLR
                     DVEMQEPMYVYAADGKLMAVFGETRRTPVTMKDVPERLKQAFLATEDARFYEHGGVDY
                     MGIGRAVWLLATTNDKRVPGGSTITQQVARQFFLSSEYSYTRKLAEILLARKIESELS
                     KDEIFELYLNKSFFGNRAYGVAAAAEFYYGKKLGELNLDEMASLAGIPKFPSSGNPIS
                     NPERARQRRDNYVLQRMADLKFVTQAEADAAKAVPMHASAHEPPVQVDAPYVAELVRQ
                     EMIARFGGDVVNKGYRVTTTIDSTLQTAANLAVRDGLLLYDHRHGWHGVEKQVQVGAG
                     EDAAALAEHLRGMFGQSGLLPAIVASTGADGSATVVLANRSEIVLPAGAAKWTNKTPG
                     KLVQRGDIVRVRAGAKDGEWLLDQLPRGQSALVSLDAHNGALKALVGGFSFSGNKFNR
                     ATQARRQPGSSFKPFVYAAAFDKGYNPASIVLDAPVVFRDRRGKTWAPQNDGGGFRGP
                     MRLREALVQSRNLVSVRLLDGMGVDYARKYISEFGFAESELPPNLSMSLGTASLTPLS
                     VARGYAVFANGGSRVDTWLIDQVNDRDGTLVFKENPALACRECAGSSDQPVNQVVDGF
                     NFGAPAPKVDPAAAAKTEAKTETAAVPANPDARTAPRAIDARTAYQLVSMMRDVVQRG
                     TGVQAKVLGREDVGGKTGSTNDHRDAWFSGFGGPYVTTVWVGRDDFRSLGYREYGGKA
                     ALPIWIDYMRTALKDTPIAQNDPPSGMVQATLNGATEWVKVEDMDRLTDYDLNLNTPQ
                     ADAAAFDIF"
BASE COUNT         2608 a         5808 c         5262 g         2614 t
ORIGIN      
        1 ggaatctgga ctcagtcctg ctgcggaccc agcgccgggc cgtcgtggga ctcgcccttg
       61 gccaccaggg tggtcagggc caggtcgccg gtcacgttca gtgcggtacg gcacatgtcc
      121 aggaaatggt tcacgcccag gatcaggccg atacccagcg ggttcacgcc gaccatcgcg
      181 cagatcatcg ccaccaccgg cagcgagccc gacggcacgc cggcggtacc gatgccaccg
      241 aggatgcaca ccgccatcac catgaactgc tggccgatgc tcaggtccac gccgaagaac
      301 tgggccagga agatcaccgt cacgccctcg aacagcgcgg tgccgttctg gttggcggtg
      361 gcgcccacgg tcagcacgaa gcgcgacaca cgctgcggca ggcccatctg gtcggccacg
      421 cgcagcgcgg tcggcagggt ggcgttgctg gaggcggtgg agaacgccat caccgtcgct
      481 tcctgggtat cgcggaagaa cgacagcggc gagcggcccg acagccacac ggcggtaccg
      541 taggtcacga tcatgtgcag gcccaacgcc agcaccacca cgcccacgta ggcgccgagg
      601 cggatgatca gctcgaagcc gaacagcgcg gccaggttga acatgaagca ggccaccgcg
      661 tacggggcca ggcggatgac caggttgatc agggtcatcg agatttcgaa cacgccttcg
      721 atggcgcggc gcagcggggc gaccttctcg ttgtcggtca gcaccatgcc gatgccgaac
      781 atcagtgcga agaacatcag cgacaggatc gcgccgttgt cagatgcggc ctgcagcacg
      841 ttgctcggca cgatcgacag cagcatgtcc atgcccttcg gcgtgccatg gatgccggcc
      901 acgatctcct tgctgcgctc ggcgttctcc gacagcatca tcgcagcgac ctgcgggtcg
      961 acgccggcac ccggcttgag cacgttgacc agcaccaggc cgatacccac ggcaatgccg
     1021 gacagcagca cggtataggc cagcgtcttc cagccgatgc ggccgagggc gcggatgtcg
     1081 cccatctccg acacgcccat gatcagcgcc gagaagatca gcggcacgat cagcatgaag
     1141 atcaggttga ggaacaggcc cgacgccggg gtggtgacgt agtccattac ccacttggca
     1201 ccgccctgca gaccctcgac gctgccgccc agggcatgca cggtcagtcc caggaccagg
     1261 ccgatcgcaa agccgatgcc catcttccag tgcaggggca acttcttctt gtcggcagca
     1321 gctgctgtca tacgcgggtt tcctcgaaaa atgaatgcac tctaacaaag cgcgcaagcg
     1381 gcgccggttc aggttcgccg cggtggatac agcggcgcca ggccagtgtc agcggctccc
     1441 gcagctgccg accagtgcgg tccgtcacgg aaggccgcgc gcaggcgcgt acgcagcgcc
     1501 gccagatcgc cctgcccgcc ccagcgcgcc tgctgcaggt cctgcaacac ctggcgctgc
     1561 tccggatcgt ccagacgcgc gatgacctgc tcgatacgtt cgacaccggc catcgcacac
     1621 agctgtgctt ccacttggtc gaagccctcg ccatcgagca cgcggcgcag ttcggccaaa
     1681 ccggcacggc cgctcgccac agtcggcaca gcggacgtgc cggcgacagg cgccgctgca
     1741 cgcgggcgac ggccacgctg ccagccccac agcagggtca gcagccacag cagcgtcagc
     1801 ccgatcgcgg cgcccatcca gggccatggg cgctcggcga cgccgctggc gcgcgggtcg
     1861 gtggccgcga tgcggctgtc ctggccatcg gtgccgggca gcgcggcgtc ggtgtcgatc
     1921 ggcggcaacg gtgccggcgg ggtattgccg ccgccattgc ccgccgcaac cgccagcgtc
     1981 aggtccggca gcgttgcttc ctgtgccttg ccgctgcgca catcccacca gggcaggcgc
     2041 gggccgggca ccaccagcga acccggctgg cgtggcacga tcgaatagcg gcgggtgatc
     2101 ttcaggcgtg gcgtgctgcc gttgaaggtc tcttcgtact gggccggttc ggcgaacacc
     2161 tgcgcattgg cgccgacatc cggcaccggc agatcggtga actgcgcgcg cgtcgcgcct
     2221 tcggcaaccg cttcgaccac cacgttggcg gcctcaccgg tgcgggcgct ggtcggcgca
     2281 ctggtgtagc gcaactgcag gctctgcagc ggcagccacg gctgcggcgc ctgcgccggc
     2341 tgtgcctgca cctgcaacgt gcggtcggcg ccggtggcat tcatgcggcc gtcgcccccg
     2401 ccaaagaagt cgtcgaagaa gccaccggca ctgcgcccgc tgaagcgcgc accggccaac
     2461 cgcaatgcgc cgctgcgctc ggggatcagc aggaagcggc gctcgaccac gttgtagcgg
     2521 cgcccgttga cctggcgcac atcggtgcgg tcatcgccca cgcgctgcaa tgacgcgccc
     2581 gccggggtat ccagtaccag ttcacccgac gccagctgcg aagcaaagta caaccgcacc
     2641 accacgccca cgctctgctg cacgtatggc gtttcgtcat cgacaaccgt ctcgatgaag
     2701 gccatcgcag tgctgtccgg gcccgccacg gcggccgcgt ccacctgcag ggtcagcggc
     2761 gcggtacgca cactgcccac ctgcaggccc ggaaccacca gcgcaccgct gcgccgcggc
     2821 gtcagcgcca cgccgtacag gttgcgctgc tgcatgctgc cgttgctcca ctccacctgg
     2881 cggctgctgg tctgcgcgct caggtcgaag tcggtacgca gaggcgtgaa gtcaggcgcg
     2941 ccctgatcgc tctcgacatt gagggtgacc gtatcgccca ttgcaatgcg atcgcggtcc
     3001 agccaggcgc gcggctgcgc ccaggccagc agcggcagcc acagcagcag tgctgccagt
     3061 acctgccggg gccagcgccc atgcatgttg atcgcccgcg tcatcgccct tccctcttcc
     3121 tgcgttcgtt ttccagctgg aacttggcac gcagcagcgc ccccggatca tcgggtacgc
     3181 gtcgcatcca cgcctccacg gcctgttgct cctcgcgttg gcgcggggtg gtgccttcgc
     3241 tgcctggcac gggcttgcca tcctgttcgc ccttgccttc acgtgccttc tgcattgcct
     3301 gctgcatgcg ctggcgctgc tgctcgtcgg cctgcgcctg cgccttggca tcttccacct
     3361 gcggtggtgc ctgctggcca tcgcggccgc gctcaccggg ctgaggcttc gactgtgcgt
     3421 tgttgtcacc cgccttgggc gggtcctgct ggcccgactg cggctggccc tggccgggat
     3481 tctgctggcc ctgctgcggc tgctggcccg acggattctg cttgccctgc gaatcgttct
     3541 gctgtttctg cgggccgctc tgctgtggct tctgctgatc ctggccctgg ccctggcctc
     3601 ccgacggctt gcgcttgcgc gcggcatcga ccacagcgcg gttggccacc gcatcggcca
     3661 tgcccggatg cagcgccagc gcgcggtcat aggcggcgat ggcctcatcg tagttgccct
     3721 ggcgcgccag cgcgttggcc aggttgtacc agccggcatc gctgtcgatg ccttcgaact
     3781 gcttgcgggc attggcgaag tcgccgttgc ggtaggcctg cacaccttcg gccaggcgct
     3841 ggtgctgcaa ctggtcagca cgcttccaca aggtaccctg cgcgggcggc ggtgcggacg
     3901 cctgcgcctg cacgtcgccc atccagggca gcaggccaac ggccagcacc gcagccagca
     3961 ccgcgcgccg gcggaaggcc agcagcgcca gcagcatcaa cggcggcagc agccaaaagc
     4021 cttcatcgcg ccactgcttg ccttcacccg gccgctgtgc cgctgtgccc tcgcgcgcat
     4081 ccagaacccc cagcgcgcgc agatcactgt catcggcggc gatacgtgca tagcgcccgc
     4141 cacctgcggt ggccacggcg cgcaggctgc cctcatccag cgccgcctgg cggatctggc
     4201 cactcccatc tcgataggcc gcaccggccg gggtacccag gcccagcacc gaaacctgca
     4261 ggccgaggct gcgtgcctgg gctgcggcca gcgcggcttc gccgtcggcc tggtcggtga
     4321 ccagcaggac ctgtccctgc agcgccgcga cctgccgcat cagctgcgcc gcccagtcga
     4381 taccgcgatc ggcacgctgt ccatcgcgcg gcatcacctc gggggacaag gcatccagat
     4441 acagcgcgac attgctgccg tcatcggtca acggcgccac cgtataggcg tcatccgcat
     4501 acaccaccag gccgacctgg ccgcccttgc gcgcgcgcag cagctcgccc agcttggccc
     4561 gcgcctgcag cagccgcgac ggcggcaggt cggtggcggt gatccggctg gacagatcca
     4621 gcacgaccag cagcggtgcg ctggcctgga acatcggctg cgcctgctgc cgccagctcg
     4681 gcccggccat cgccagcgac gccagcgtcc agcccagcag cagtgcccac ggcaggcgcg
     4741 tacggcgacg cgtgcctgcc gccagcaggt gcggcagcag gtggggatcc accgcctgcc
     4801 gccatgcatc gctgcgccgc tgccggtaca gcgccagcgc gaggatcact ggcagggcca
     4861 gcagggccca cagccattcc gggcgcagga aatgcagcgc attccagtcg ggaagattcg
     4921 acgccaacgc gatcatcggc gacgctccgg ccacagccac gccagcgcac ccagcagcaa
     4981 cgccaggccc agcggccagg cataacgttc ctcacgcggg cgcaggctgg gtcccttcgc
     5041 ggcgatcggc tccagccggt ccagttcggc atagatgccg gccagctgtg ccgtatcgcg
     5101 tgcgcggaag aactggccac cggtcatgcc cgcgatcttc ttcaatgtgg cctcgtcgac
     5161 cggatcctgg tcggcggaaa tggagatgcc gaacacgcgc atgctgccgt cgccgccaaa
     5221 cgcgacggtg tggatgcgta cgccttcggc gcgggcaact tcggccgcgc gcaggggctc
     5281 cagtacgccg gcattgctga caccgtcggt cagcaggatc agtacgcgct ggccttcggg
     5341 ctggctgcgc aggcgcttca ccgccaggcc gatggcatca ccgatcgcgg tttcgcggcc
     5401 ggccaggccg accacgctgt cgcgcagctg gtcgcgcaca ctggccaggt cggcggtaag
     5461 gggcgtcaac gtgtaagcac ggtcgccgaa gatcagcagg ccgatgcgat caccggcgcg
     5521 gcggtcgagg aagtcggcca gcaccgcctt ggctgcggtg aggcgatcca cggcctgtcc
     5581 gcccagcacc atgtcgccct cgcccatgct gccggacacg tccatcgcca gcatcatctg
     5641 ccggccctgc tgcggtgggg tgatggcctc accgagttgc tgtggacggg caagcgcaac
     5701 gcacagcgcg caccagccca accacaacag cagggtacgc agccaggaca cgtcgacgcg
     5761 gccaccaccg gtcagtgctt ccagttcgct ggcggcatat ggcacgcgca gcgccgcgcc
     5821 ggggtcagcg cgacgcttcc acgcgtacat cagcagcggc aacggcaatg ccagcagcgc
     5881 cagtggccat gccagctgca ggtccggcca cggccagtaa ctcgccagca gattcatcga
     5941 cgacgctcca ccagcattgc cagatagcgc gctcgggacc agctgcgcac cgcggccact
     6001 tcgctggcat ccacgcgtgg ccgataggcg ccctcggcca gcaggctgcg ccgtgcgtca
     6061 gacagcgtgc cctgcgggtc cacgcgttgc caccatgcgt cgtcgcgcaa cgattcactg
     6121 cccggacgtg cctggcgcgc ggcacggcgc agcaggccgg cgatcgccgc cagttccgcc
     6181 accgcatccg tacaggccgc cagctccctg tcgaactgct gcagccagcg ctgccgacgg
     6241 cggcgacgct gccaccacac gaatgcaacg accgacagca gcagtagcac cgccgcaccg
     6301 atcatcagat agcccggtgc cggtggccac catggcgggg ccggcggcag ctgcacgtcg
     6361 cgcagcggca ggttggcgct catgccggca cctcggtcgg caccggggcc agccacgcat
     6421 cgctgggcgc atcgctggaa agcacctgca cgtcaacgcg gcgtgcgccg agctggcgcc
     6481 gcagttcctg cagcggctcg acgaaatgcg cgtgccaatg cgcctgcacg tcgctgcggc
     6541 gcaggtcgag tccgatgcgc tgctgcgcgg tctggaactg cagcgcggcc gacggcggct
     6601 gcagttccaa tggatcgacc agcagaacca ggctgaggtc atggtgctgg gccagcgcgc
     6661 tccagcgtac cggcgcaatc cgtgccgcct gctgcggatc ggccagcacc agcatgcgcg
     6721 caccggggcg cagcacgcga ctggcgtggt ccagcgcacg ctcaagacca agatcatcgg
     6781 tgggaggctg cgcataccag cgggtgagcg catcgagtac gcgcagtaca ccgcgcggcc
     6841 cgcccgcggg tgcgaccggc ggctcgcggt cgctgccacg cagggcgccc acgcggtcgc
     6901 ctcgacgctg cgccgaccag gcggcaacgg cgcccgcgcg cgcagcctgt accgacttga
     6961 agcgcacccg ggtgccgaaa tacagcgccg gcgaggtgtc ggccacgatc aggctgaccc
     7021 gctcgcgctc ggcctggaac agcttggtgt gggcacggcc ggtacgcgcg gtcacccgcc
     7081 agtcgatatg ccgcgcatca tcaccggcca cgtactcgcg tgattcggcg tactccatgc
     7141 cacgcccgcg cagcggcgac ggtgcctgcc cggcattgcc ggcacggccg cggcgtggcg
     7201 gcggcgggcg ctgtgccagc cgacgcagcg cgaccagttc ggccaactgc gggcgcagcc
     7261 cgtcgccctc gctggccatg gatgcaggtg ccggggatgg atcggtcatg cgcaggctca
     7321 gggtgccggc acgcgggcca gcagctcctg caccaggcgc tcgccatccc agccttcggc
     7381 tgtggcttcg taactgggca gcacgcgatg gcgcagcaca tcagcggcga ccgcgcgcac
     7441 gtcatcgggc gtgacgaaat cgcggcccgc caaccaggcg cgcgcacgtg cgcagcgttc
     7501 cagcgcgatg gaacctcgcg ggcttgcgcc ccacgcgatg cggcgaccga ggccggcgtc
     7561 gtagcgcgac ggatcgcgcg aggccagcac cagttcgatc aggtagcgtt ccagcgcggg
     7621 cgccatgtgc aggtccagca cttcgcgacg ggccgcgaac acatcctgca tcggcagctt
     7681 ctccggcgcc ggcgcggctt cgcccaatgc gccacgggca cgctcacggg ccagccgcag
     7741 gatttccgat tcggccgcct ggtccgggta gccgatgcgc acatgcatca ggaagcgatc
     7801 cagctgtgct tccggcagcg ggaaggtgcc ttcctgctcg atcgggttct gcgtggccat
     7861 caccaggaac aacgacggca gcgcgtaggt gtggcgtccc acggtgacct ggcgttcgcc
     7921 catcgcttcc agcagcgccg actgcacctt ggccggcgca cggttgattt catcggccag
     7981 caggatcggg tggaagatcg ggccgggcac gaactcgaaa cggccttcct gcgggcgcca
     8041 gatctcggtg ccggtgaggt cggccggcag caggtccggg gtgaactgca cgcgcgcgaa
     8101 gtcggtttcc agccgtgctg ccagcgcgcg gatcgccgtg gtcttggcca gccccggcgc
     8161 cccctccacc agcaggtggc cgtcggccag cagcgcgatc agcaggcgct cgaccagcgc
     8221 agactggccg acgatttcgg ctgacagcgc atcgcgcagc tggctgaagg cggcgtgcag
     8281 gcgggagctg gccggcgcgg gcggcggcgg gacggtttcg ggcatcggcg gaggcaggtt
     8341 catgggggcc tttgaccggc gcaggacggc acgggttccc gacatcatcg cagggtgccc
     8401 tgcgattgac atcaagaacg gctgaacagc ccttcgcgca ccgcagggtc ggacctaatg
     8461 aaaaagggcc gcacaaggcg gcccttcttc ctgcaacagg tggtaccggc tcagttctgc
     8521 ttggccacgc gcagcacctt cggcgtgacg aacaccagca gctcggcctt atccttgctg
     8581 cggccgcgct tcttgaacag gttgcccagg aacggcacgt cgcccaggaa cggaaccttg
     8641 ctcacgctgc tgcggtcggt gaactcgtac acgccaccga tgacaacggt ctggccatcg
     8701 tccaccagca ccgcggtatt gacttcacgg cggttgattt ccggcacggt gccatagccc
     8761 tgcagctgga tcaggcgctc cacttcatcc ttcttcagct gcatgttgag gaacacacgg
     8821 ttgtcgttgg tgatggtcgg ggtcaccttc agctccagca ccacttcctt gaactggacg
     8881 ttgggcgtgg cgacgccgcc ggtgccgcca ccactgatgg tgacgtagcc gatttccttg
     8941 ccctgcttga tcagtgcctc gcgctggttg gtggtcacca cgcgcgggtt ggagatcact
     9001 tcgccacggg cctcttcctg catcgccgac agctcaacgt ccagcaggta gccggcattg
     9061 aggatcgaca gcgccaacga gcccggggtg gcggtcgaag cggcaggcag gttgaagttc
     9121 aggccacggg tgatggccgg aagcagcggc accggtgccg gtccaacgct gccacccgct
     9181 tcccaatcgc gataggcctt ggcattggcg gccgaagtat ccgcctgcga caggcgggtc
     9241 ttgcggttgg cttccaggtc accactgaag tacacgttgt cgcggctgcc gctgatgccg
     9301 aacttggcac ccagctcgcg ggcgaacgta tcggtggcga tgacgatacg gctttcgatc
     9361 agcacctggt cgaccggccg gtcgatcacg ccgatcagtt cacgcatgcg cgcgatcttc
     9421 ttcgggatgt cgctgatcat cagcgtattg gtgcgttcgt cggccacgat gcggccacgc
     9481 gaggacagga agccactgtc ttcctgcgac gccgaaccac cgctgctgcc gttgccgcca
     9541 ccaccgccga tacccttggc ttcggtcagt gccttgaaga tctgcgtggc gctgtgatag
     9601 ttgatctgca cgtaatcggt aaccaggtct tcgcggttct cgatcgcgat gcgcgcgtct
     9661 tccttctcct gctcgaactt ggccagctcg gcctgcggcg caacccagat cacgctgccg
     9721 tcgcgacgct tgtccaggcc cttggcccgc agcacgatgt ccagcgcctg gtcccacggc
     9781 acgttgacca gacgcagggt cacattgccc tgcaccgaat cggacgccac cacgttgagg
     9841 ttggattctt cggcgatcaa ctgcagcacg gtgcgcaccg gcacgtcctg gaagttgaag
     9901 gtcaccggct tgccggtgaa accgcgctgg cccacggcct tggcggcctg cgcaacgctg
     9961 cccgcagtga ccgcaccgac tgccgccggc gcctgacgcg ggctgatctc gaccacgtat
    10021 tcgttgccgc tctggtaggc cagcgaatcc accgcaccgc cggtgctcag gaccagttgg
    10081 gtacccgcgc cggagggctt ggcgtcgatg cgctgcaccg gcgttgcgaa gtcggtgacg
    10141 ttcatcggcc tctgcaggtt ggccggcagc cgggcgttgc cgacatcgac caccacgctg
    10201 ttgccctgcg tgcgcaggtc cggcaccgca ccctgcccgt cgaactggac gatcaggcgg
    10261 ccggcgccgt catcgccgcg cttgaaatca atcttcgcca ccgacaggcc tgtcggtgcg
    10321 acggccgcag ccacggtggc gccggccggc ttttccgccg gcgtggcagc cagcgccgga
    10381 gcgcaggcca gcatcagcgc gactcccaac gcgctgacac ggttcaaggt agagcgccgg
    10441 atgggacgca gccccttggc ttggtgaaag gtcatcgtgc tatccccagt aaacgatcat
    10501 tgatcttcaa gcgagagcgt tgccggccgt tccagccagc cgcccgcacc atccggcacc
    10561 agttcgatca gctccacgcg gtcttcgaag accgccgtga tccgcccgtc gctctgtccc
    10621 aggtaaccgc ccgggcgcac ccggtaggtc accttgtccg gccccatcac cagcgcgacg
    10681 acgcccgcac ccgtgccgat ggtgccgacc atgtccagtg cgtccagcgg gaagccttcc
    10741 agcggctcct tgcgccggtt cggatccgga cgcaatccgc cattcccctg ctgcggattg
    10801 gtccaggcat cggtgaacgg gtcacgcatg ccctgcgcgg aatactcgaa ggtctcgaac
    10861 tgctgcatca ccggcagcgg ctccagcggc tgcgccggcc gtgcccgctc gccttccacc
    10921 cacttttcca ggttgggggc gtcgccgggc gtgctggtca cgccgcggcc gcaggcggcc
    10981 agcaacagga ccgccaacgc cattgcaccg cgtgcgatgt acgtgcgcat cacttcttgc
    11041 cccccttgcc cttcttcttc gcctcggcat cggcagcagc ctgctgcgcc tgcacttcgg
    11101 tctcgtccag gtaacgatag gtcttgaccg tgccggacaa ctccagcgca ccgctacgga
    11161 cgttgccctt ggacttgtcc ttgggcttga ggttgatgtc gtgcatggtc aggatcacca
    11221 cccgcggcag cgacgccacg ccgctgacga acgcgccgaa ctggtggtag ctgcccacca
    11281 tccgcagctt gatcggcttc tcggcgtaga actccttgac ctgctcctgc tcgggctcga
    11341 acagctcgtt ggccaggccg ctggacaacg cggtctgcga gatgtcgatg atcaggtcgg
    11401 gcatttccgt cttgctcggc agctgccgca gcatctgctg cagcacctgc tccatctgcg
    11461 ccagctgctg cttcagcgga gccaggttca ccgcgcgttc ctgctgcttg gtgaactcgg
    11521 aacgcagctc gacctccttc gattccaggc cagcaagttc ctcgcgcttg ccgctgatca
    11581 gcagcatcca cgccaggaac atgatcacca gcgccagcac cgagcagaag acgatcttgg
    11641 ccttctgcgg ccagttgccg atgtcgttga aatcgaggtt cttcagatcg atcttctggc
    11701 tcatgcgcgg tccccctgca gcggcgcgat gaaggcctgc ggcggctgca ccaggcggct
    11761 tccctcaggc ttcggggccg gcttggcagc cggcgctgcc ggctggttcg gcttggccgg
    11821 tgcagcggcc ggtgcagtgg caggtgccgc cggagccggt gcctgcgcat tcgcggccgg
    11881 agccgcagcc ggggcggcag gcgtggcagg cgcggcggcg tccggacccg cagcaagcgg
    11941 ggccaccgca gccggcgggg ccgacacaac cgtgccatcc gcgttcaggc ccggcgtcgc
    12001 cgcaacctct tcgctctgtg ccggcagctt caccttgacc acgaacacgt acggcagtgc
    12061 cttgatgtcg gtaaccggac cggtcttgcc gtccttgtcc ttctccggct cgcgcgcctc
    12121 gatgatcgac agctccggat tggtcatcca gccggaggtg tccaggttgc gcatgtaggc
    12181 cgagacacgg gcgttggact gggtacggcc ttccagggtc agcacgtcgc cttcctgctt
    12241 cagcgcggtc agcaccacgc catcgggaat cgtacgcacc agcgcatcga acagatggac
    12301 catctgcgag cgcttggcct gcagttcctc gatcaccttc ttgcgtgcca gcaggcgttc
    12361 cttctgcgca tcgaggcggt cgatctcctt gttctgttcc ttgaccttct cgatctcggc
    12421 cgacagatag gcattgcgat ccatctggcc gctcacctgg cggtcgtagt agaaccagat
    12481 cagcagcgac agcagcaggc caccgatcgc ggccatgccc agcattgcgt agaactcgcg
    12541 ctggcgttgc ttgcgccgct cggcgcgcca gggcaataga ttgatgcgtg ccatcagtcg
    12601 aagctcctca gcgccagacc ggtggcgatc atcagcgcgg gggcatcctg ggccagcgca
    12661 tgcgcgttca ccttagggcc cagggtcatc tgtgccagcg ggttggcgac cacggtcggc
    12721 acgcccagct gttcttcgac catctccggc aggccaccca gcacggcaca gccaccggcc
    12781 agcacgatgt gatcgacgcg gttgaactca ctgcctgcat agaagaactg cagcaggcgg
    12841 ctgatctgct gcaccgtcgc ttccttgaac ggttccagca cttccatctc gtaactttcc
    12901 ggcaacccgc cctggcgctt ggccaggccg gcttcctcgt agctcaggcc gtagcggcgc
    12961 atgatctcgt cggtcagctg cttgccaccg aacacctgtt cgcggctgta caggctgcgg
    13021 ccgccgcgca ggacattgag ggtggtcatg gtcgcgccga tgtcgaccag cgcaacgaca
    13081 ccgtcgatgg acaccggcag ctcgctggcg accagggcgt aggcgttctc gaccgcaaag
    13141 gcctccacgt ccatcacctt ggcctgcagg ccaccgagct ccagcgccga ctggcgcagc
    13201 tccacattct ccgaacgcga cgcggccagc agcacctgca ccatctcggg gttgttcggg
    13261 atcgccccga tcacctcgaa gtccaggttc acttcctcga tcggatacgg gatgtagttg
    13321 accgcttcca gctcgatctg ggcttccatg tcgttctcgt cgagctcggc cggcatcggg
    13381 atcaccttgg tgatcaccgc cgacccggcg acggcggcag cggccagctt ggccttgctg
    13441 cctgaacggt tcatcgcccg gcggatggcc tcaccgaccg cctccacctc cacgatgttc
    13501 ttctccacca ccgcattcgg cggcagtggt tccacagcat agtgttccac acggaaacga
    13561 ttgccgctgc gggacagctg caaaagcttt accgcagtcg aactgatgtc gacgcctaca
    13621 agcggcgact gactttttgg gatgagcccc acggtttctc ccctgccgac gggcacttgg
    13681 acacaagacc tgcgtccgag cattaataac gtattcttag caaatggcaa cgaccctgct
    13741 gtgaagtccc tcacggattc acattgcagc ccctggcagt tccccttgcg ctccccagtg
    13801 ccgaccccag ccgccacctt gcgtaatcta tactctgcga ccacgaaatt cgcaatcgga
    13861 atctgaaccc gatgactcga ctccgccgct ggctgcgctg gatcttcctg attgtcctgg
    13921 tcctggcgct gatcggcgcg gccgccgtgg gcggtctgta ctacgccgta tcctccaagc
    13981 ttcccgacgt gcagaccctg cgcgacgtgg agatgcagga gcccatgtac gtctatgccg
    14041 ccgacggcaa gctgatggcg gtgttcggcg agacccgccg taccccggtc accatgaagg
    14101 acgtgcccga gcgcctgaag caggcgttcc tggccaccga ggatgcccgc ttctacgagc
    14161 atggcggcgt ggactacatg ggcatcggcc gcgcggtgtg gctgctggcc accaccaacg
    14221 acaagcgcgt gccgggtggt tcgaccatca cccagcaggt cgcccgccag ttcttcctca
    14281 gctccgagta cagctatacc cgcaagctgg ccgagatcct gctggcgcgg aagatcgagt
    14341 ccgagctgag caaggacgag atcttcgagc tgtacctgaa caagagtttc ttcggcaacc
    14401 gcgcctacgg cgtggccgcc gccgccgagt tctattacgg caagaagctg ggcgaactga
    14461 acctggacga gatggcctcg ctggccggca tccccaagtt cccctcttcc ggcaacccga
    14521 tctccaaccc ggaacgtgcc cgccagcgcc gcgacaacta cgtgctgcag cgcatggccg
    14581 acctgaagtt cgtcacccag gccgaggccg acgccgccaa ggcggtgccg atgcatgcca
    14641 gcgcgcatga gccgccggtg caggtcgatg ccccctacgt ggccgaactg gtgcgccagg
    14701 aaatgatcgc ccgcttcggc ggcgatgtgg tcaacaaggg ttaccgcgtc accaccacca
    14761 tcgactcgac cctgcagact gccgccaacc tggccgtccg cgatggcctg ctgctgtacg
    14821 accaccgcca cggctggcac ggcgtggaga agcaggtcca ggtgggcgcc ggcgaagatg
    14881 ccgccgccct cgccgagcac ctgcgcggca tgttcggcca gtccggcctg ctgccggcca
    14941 tcgttgccag caccggcgcc gacggcagcg ccaccgtggt gctggccaac cgcagcgaga
    15001 tcgtgctgcc ggccggcgcc gccaagtgga ccaacaagac cccgggcaag ctggtgcagc
    15061 gcggcgacat cgtgcgcgtg cgcgccggcg ccaaggacgg tgagtggctg ctggaccagc
    15121 tgccgcgcgg ccagtccgcg ctggtctcgc tggatgccca caacggcgcg ttgaaggcac
    15181 tggtcggtgg cttcagcttc tccggcaaca agttcaaccg cgccacccag gcccgtcgcc
    15241 agccgggctc gagcttcaag ccgttcgtct acgcggccgc cttcgacaag ggctacaacc
    15301 cggcctcgat cgtgctcgac gcgccggtcg tgttccgcga ccgccgcggc aagacctggg
    15361 ccccgcagaa cgacggcggc ggcttccgcg gcccgatgcg cctgcgcgaa gcactggtgc
    15421 agtcgcgcaa cctggtctcg gtgcgcctgc ttgacggcat gggcgtggac tacgcgcgca
    15481 agtacatcag cgaatttggt ttcgccgaat cggaactgcc gccgaacctg tcgatgtcgc
    15541 tgggcaccgc ctcgctcacc ccgctgtcgg tggcccgtgg ctacgccgtg ttcgccaatg
    15601 gcggctcgcg cgtggacacc tggctgatcg accaggtcaa tgaccgcgac ggcaccctgg
    15661 tgttcaagga aaacccggcg ctggcctgcc gcgagtgcgc cggcagcagc gaccagccgg
    15721 tcaaccaggt cgtggacggc ttcaacttcg gtgccccggc gccgaaggtg gatcccgctg
    15781 cggcagccaa gaccgaagcc aagaccgaaa ccgctgccgt accggccaac ccggatgccc
    15841 gcaccgcccc gcgcgcgatc gacgcccgca ccgcctacca gctggtgtcg atgatgcgcg
    15901 acgtggtcca gcgcggtacc ggcgtccagg ccaaggtgct cggccgcgag gacgtgggcg
    15961 gcaagaccgg ctccaccaac gaccaccgcg acgcctggtt ctccggtttc ggcggcccgt
    16021 acgtgaccac cgtgtgggtc ggccgcgacg acttccgctc gctgggttac cgcgaatacg
    16081 gtggcaaggc cgccctgccg atctggatcg actacatgcg caccgcgctg aaggacaccc
    16141 cgatcgcgca gaacgacccg cccagcggca tggtgcaggc caccctcaac ggcgcgaccg
    16201 agtgggtgaa ggtggaagac atggaccgcc tgaccgacta cgacctgaac ctcaatacgc
    16261 cgcaggccga cgccgccgcg tttgatatct tc
//
LOCUS       DAOKIP010000080        16133 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.080,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000080 DAOKIP010000000
VERSION     DAOKIP010000080.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 16133)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16133)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16133
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.080"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(12..2120)
                     /locus_tag="QEL58_002137"
     CDS             complement(12..2120)
                     /locus_tag="QEL58_002137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005416099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase C, phosphocholine-specific"
                     /protein_id="HDS1676609.1"
                     /translation="MTDIGRRRLLQAGVAAGLSPLLPSIARAAAIAPATQTRSLEDLQ
                     HIVVLMQENRSFDHYFGTLPGVRGFGDRFVAPAAALEAGGRTRSLWLQPDASGKRAIA
                     PFPLDTAAHFGYMRVEGTPHTWPDAQRAWDHGRMGQWPKAKQNHSMGYFQRSDLPFQF
                     ALADAFTICDAYHCAMQAGTNPNRVFLWTGHNDAAARAGGPVIANSHDNFPEYGGHPA
                     SYRWSSYVERLQQASVSWQIYQDMADNFTDNPLAGFEAFRRAYSAAPGHDPQLRARGV
                     STRGLAQLRQDVLDGRLPQVSFIIADAAGSEHPGPSSPAQGAAYTARVLDALTADPEV
                     WSRTALLLMFDENDGFFDHMPPPAPPSPVDGGWAGASSVSTDGEYHRHPAPGDEKYDA
                     AELRGRPYGLGPRVPLYVISPWSRGGWVDSQVYDHTSVIRLIERRFGVAAPDISPWRR
                     AVCGDLTGAFDFAQRDTRPFVRGLPDVSAVAARAAALPGRTVPALPEGLNPAKQESGI
                     RPARALPYRPQASIARLDATGVDLVLSCEGAAAVLHVYDRLRLGAIPRRYTLLPGMPL
                     QERWPLDAQGRYDLWLLGPNGFHRHFQGAAKAPALQATVERADGPLRLQLRNLGDSAL
                     QLHVQAGAYAGHMPEQALALPARAETSLAWDATPTAGWYDLQVSAGESTLRLAGRAED
                     GRPGTSDPAMGSEPLRFEHD"
     gene            complement(2129..4507)
                     /locus_tag="QEL58_002138"
     CDS             complement(2129..4507)
                     /locus_tag="QEL58_002138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019338295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDS1676610.1"
                     /translation="MRTIARFPRISLLALLIAPALDALAEAPQGETAEARSSDARTLD
                     QVQVIGQATSYAKTSVRAETLNRQTVMSSVNDALNEVPGVVVSEADATGSSVWGTQIS
                     MRGFVTNRDTQQIGTTIDGLPNGGSGYGGGSLANRYIDTLDLETVEVSQGTADISSRS
                     NEALGGTLNFLTSDPLQDSRLRFVIGAGDNDARKYYVRYDTGLLGGHTRAWVSASSSK
                     VHDWIDGTGHASNDHIAGKFITELDRWTLTGYLSYNDADEPEYTSVSPAGFATNPDRD
                     NLVGTLTGIPYLDQNYRSGSRALRENTFGYLRAAFDGGNGFKASVAAYGHRMEGRGDW
                     LPPYLAQVSDDGAGRPESEYIGGKTFYGGSNRGQIFFVNPDGSAAQRLASCTPRLGFT
                     AEYDPNCYAGNVLGAQSYRHTHYDNDRMGVTADVEWRQSFGAVDNTIRGGLWVEKLDR
                     SARRDWHRLLNVGQSIAFDHQPYWVQFEDKYKVDEQMYYVEDVARFGPFSARLGVKQF
                     FVDQSRRRVIGASEHVKSDSKSDPLLSTGFTWAPGVEGMELFAGFSQNFAAIPSGVLG
                     ETDPQRFRNVEPETADNIEVGMRISRWPLTASVTLYNIKFDNRIVYLPAGFVSGIDYL
                     GETDGVYENFGGVESNGLEAAFGYGWDNGWRINAAYTYNRSKYLGSGNAARDTQLGIV
                     DGAKVIGQPENTLVLSADWQGANWNFGLSGRYLGTRYLDAANVNKLPSATVFNANIGF
                     DLQGLSPRLKGMGANLVVSNLTDKRYLAGVDGRDNAFIGAPRTVGISFRVDL"
     gene            4658..6190
                     /locus_tag="QEL58_002139"
     CDS             4658..6190
                     /locus_tag="QEL58_002139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005416101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HDS1676611.1"
                     /translation="MRKRSKIWLGGAALVLLAGCNRAPSGEQAGAQPPPPTAGENAAP
                     EAAPPASSAAADGAALTDRDGKPVPLVPFDTGSVPLSAAALGELPFFSLPQGYAPQNA
                     PHPRAWARFPFRMGEGVHWVEGPSWSARIVADSEAAPDKAFSALEVQRNFDGVITAAG
                     GRKVFEGALLRDIYYGPQLEGEIGGGFIDAVNGEQDAPTTVYVLRQANRTVWLQLAVD
                     SNGAGLVVVDEVPFKATARWSDSFPHLSLPAGYGDRNKAQQRDFDAFPFWTGDHFEQV
                     EGRTFAVDFDKGEREYSMHEVRRNLEAMMAQVNGTKVFEGRIPREAAEGVPKPVQSAY
                     SNAASFNWNNYDSVVYRVDLADGRQVWVHARLEYLSAGWVVAERKGFTQTAALLPADA
                     LKKKLDSDGRVAIQVNFATDKAQILPASEAQLAQVLQLLQGDPALKLSIEGHTDNSGA
                     VAHNRSLSEDRARSVVAALTARGIAADRLQAAGFGADKPVADNGSEDGKARNRRVELV
                     KR"
     gene            complement(6203..7129)
                     /locus_tag="QEL58_002140"
     CDS             complement(6203..7129)
                     /locus_tag="QEL58_002140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019658851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HDS1676612.1"
                     /translation="MKRSRKHSRLLFGSAIAALVLAGAGTLAYRHLYPDLDAATASTF
                     DMLDMQGKVVGHYQPPSAEEIAALGNAESVMLGRRLLNETARLLPDNVGNDLNCNSCH
                     MAEGKRPFGNHYFNTGGGAYPRYMPRPGRVIGLTERINGCLQRSMNGKPLPKDAPQMR
                     AMLDYMAWLSSPVPEGARVAAPSEGPIDSTLTPDPIRGQALYAAQCAACHGDNGEGRR
                     DASGDIAFPPLWGEHSFNIGAGMARLYKAAGFVKHNMPPAVTREPPLGQQVMPDQDAV
                     DIASYFINQPRPDFANKSKDWPRDPKPKDARY"
     gene            complement(7126..8472)
                     /locus_tag="QEL58_002141"
     CDS             complement(7126..8472)
                     /locus_tag="QEL58_002141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HDS1676613.1"
                     /translation="MRTSLKLAIALAATVAAAYGIARTTPYWFAPRQTAQVDIHDPAL
                     ITQGQYLSRAADCAACHTAPGGKPFAGGLGMQTPMGTIYSTNITPDPDTGIGAYDYAD
                     FERAVRRGIRHDGQPLYPAMPYASYVIASDAEIKALYAYFMGSVQPVRQDNADSTIPW
                     PANMRWPLAWWQLLFARPRSFNPDPSLDAGQQRGAELVEGLAHCGACHTPRGLAFQEK
                     AMADDGSRQFLSGSVLEGWYAKNLRNESTGLASWSEGEIVDFLRTGRTDRSAAFGGMA
                     DVVEHSTQYLSDADLLAMARYLKQLPAREGRSAQGAAGTDTTTAALRNGDYRVAGSLA
                     YAEHCQACHRADGRGMPRVYPALAGNSIVFADDPSSLVQVTLIGGRTPHTPHDRMAFT
                     MPGFEQLPNAQLAQILTFIRSSWGNQASAVSEVDVARMRRVVRDKPVHYVPQEAAR"
     gene            8658..9812
                     /locus_tag="QEL58_002142"
     CDS             8658..9812
                     /locus_tag="QEL58_002142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008268325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HDS1676614.1"
                     /translation="MKRLLLLLLACAGLWLAACSSSINASSTSLADRLIAPGGVSTLL
                     NRPRIAAAIAELPNRHGFAPGRDGVPIFWRVFDPGDYGARYHYLPQRHENGLPLDTGL
                     SLAVPQPFRAQAPRGTVVLLHGWMMNGDSMLPWSLQLAESGYRVVTLDLRNHGQSGAG
                     PSGYGTYESDDVVDVIGELRARGEITGPLYLFGVSYGAATAVFTADKLGDQVAGVVAM
                     ESFANAGVAIRTMIPHLMGLQPEGLKAQAVASYARWRYGGQDINQVIAAASRRIDVDL
                     DRVDVARALADTRACVLLLHGQGDQHIPVSQGRELALANPRAHYIEMRGEDHITLPLR
                     LDLLAGVVDDWMARDEHHPKSACPAPQLPAQAEWLVHDAADMPVKAPTRG"
     gene            complement(9896..11035)
                     /locus_tag="QEL58_002143"
     CDS             complement(9896..11035)
                     /locus_tag="QEL58_002143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014036774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDS1676615.1"
                     /translation="MTPSSPLAQQHATRAAFFIPGFATAAWAPMVPYAKAKAGLSDAS
                     LGAVLLCLGLGSLLAMPLAGALTGRLGCRRVMVITCAMMLCALPLLVLAPSPMALGAA
                     LFVFGAGVGALDCAMNMQAVAVERDAGRAMMSGFHAFYSIGGFVGAGCMTGLLILGTP
                     LWLAALVSVAILLLVAALAAPHWRPQRILHEGPLLALPHGVVLFIGVLAFVVFLAEGS
                     MLDWSAVFLAEVRQVPRDQAGAGFALFTLAMTAMRLFGDGIVERLGRTRTIVIGGITA
                     AAGFGLATLVASFPVALAGYVLVGLGCANIVPALFSMAGQQRVMPESIAITAVTTLGY
                     AGILAGPAAIGALAHVTSLGFAFLCVAALLLGVAASARSLARRLP"
     gene            11221..11916
                     /locus_tag="QEL58_002144"
     CDS             11221..11916
                     /locus_tag="QEL58_002144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014646735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDS1676616.1"
                     /translation="MSTTPTILLVHGFWGGAAHWAKVILELHRNGHDRVQAVELPLTS
                     LADDAGRTQKMIRQIDGPVLLVGHSYGGAVISQAGNEANVKGLVYIAAFALDAGESPG
                     GITQQHLPEAAPNLAPDSDGYLWLRADKFHESFCQDLSADEGRVMAVTQKAPLASTFG
                     DAVSDPAWKHRPSWYQLSRHDRMIAPENQKAMAGRMQPKRLLELDASHASLASKPVEV
                     SALILEACATIGG"
     gene            12062..14266
                     /locus_tag="QEL58_002145"
     CDS             12062..14266
                     /locus_tag="QEL58_002145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012479751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent siderophore receptor"
                     /protein_id="HDS1676617.1"
                     /translation="MQYVPVVRLPSSLPRRRLLPQALAQSLLITALASSGIAAAQSTD
                     DGDKATQTPASQTLQTVQVTANQLGTITEGSGAYTPGTIATATRLVLTPRQTPQTISV
                     ITRAEMDDFGLHGIDDVMRVTPGISIVTYDSERTEYYARGFAVQNFQYDGIPMSRDSA
                     YSAGNTLSDTAIYDRIEVLKGATGLLTGMGDPGATINLVRKKPGREFAGSASLGVGRW
                     DDYRAELDVGGPLTADGRVRGRAVGAWEDKHSNLDHYQRTSKVGYAVLEADLGERTLL
                     TVGGDAMDSDPKGSTWGGIPLLDSAGNFNRMPRSFNNGARWAGWRQYVRTGFATLEHT
                     FSNDWVAKLQLNHQVNGYDAALAGAAAGNPDPLTGEGVSLWLGKYVGKTVSNAADFYV
                     SGHFGLFGRAHELVIGGSASRKRWTNTGYGPQDGFPDTVPDYRRWDGDIAEPQWQRSY
                     DNNEVTRENGLYVVGRFDLADPLKVIVGSRLASYRSPQTRETGVFVPYAGVVYDLGEH
                     YSVYASYSTIFKPQGERDEQGKALDPLEGRSYEMGLKAEFLDGRFNASAALFQLDQDN
                     FAQPTGGKTPDGQDAYRALMGVRTKGYELEMSGQLAEGWQVQGGFSHKIARQAGTKVT
                     TLEPENQFSLHSSYRLRGAWQGLTLGGGARWQDSTFGEITNPATQAKVVHRTQPYWLL
                     DAMARYEFNDRLSATLNVNNLLDKRYYTIFSWYSTYTWGEPRNVRLTLNYKF"
     gene            complement(14321..15022)
                     /locus_tag="QEL58_002146"
     CDS             complement(14321..15022)
                     /locus_tag="QEL58_002146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008268748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pirin family protein"
                     /protein_id="HDS1676618.1"
                     /translation="MLQIRKSATRGLAEHGWLSSRHTFSFANYYDPRYVSFGPLRVIN
                     EDKVIGGQGFGTHSHSNMEIVSYVLGGALEHKDSMGTGSVLRYGDVQRMSAGSGVSHS
                     EFNHSADETVHFLQIWIFPDAENITPSYEETHFTPDSKRGQLRLIASPDGADGSLRIH
                     QDARIFATILDGGQKLHHALGNGRGAYVQVARGQLQVNGITLEAGDALQVSDEAQLTL
                     ENGNDAEVLVFDLPL"
     gene            15163..16083
                     /locus_tag="QEL58_002147"
     CDS             15163..16083
                     /locus_tag="QEL58_002147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDS1676619.1"
                     /translation="MLKLSLDALQILDAIDRRGSFAGAGKALHKVPSTISYTVAKLEE
                     DLGVQLFDRVGPRAEPTEAGRALLDEGRHLLRAARELELRVRRVASGWETELTLAVDS
                     VFPTWLLGPDIAAFREAEAPTRLRLIGEALSGTWEALLDRRADLLVGAPGEGPSGGGY
                     VVEPLGTVAFVFAVAPNHPLAAVEGVLGREQLVEHCAIAVSDSARRLLPRTVGLLMGQ
                     EMLTVPDMASKLKLQCEGVGFGFLPEPCARAAVARGQLVIREVEEHKPEETFWLAWRT
                     GEDGAALRWWRERLRRPELLSQWWQAMARG"
BASE COUNT         2634 a         5267 c         5627 g         2605 t
ORIGIN      
        1 agcgcaacgg ctcaatcgtg ctcgaagcgc agcggttcgc tgcccatcgc cgggtcgctg
       61 gtgccggggc gtccatcctc ggcgcgcccg gccaggcgca gggtgctctc gcccgcgctg
      121 acctgcaggt cataccagcc agcggtaggc gtcgcgtccc acgccaatga ggtttccgca
      181 cgcgccggca gcgccagcgc ctgctcgggc atgtgcccgg cgtaggcgcc ggcctgcaca
      241 tgcagttgca gtgcactgtc gccgagattg cgcagctgca accgcaacgg gccgtccgcg
      301 cgctcgaccg tcgcctgcag ggccggcgcc tttgccgcgc cctggaaatg gcggtggaag
      361 ccatttgggc cgagcagcca caggtcgtag cgcccctggg catccaatgg ccagcgctcc
      421 tgcagcggca tccccggcag cagcgtgtag cggcgcggaa tggcgccaag ccgcaggcgg
      481 tcgtagacat gcagtaccgc cgccgcacct tcgcaggaca gcaccagatc cacgcccgtt
      541 gcatccaggc gggcaatcga cgcctgcggc cgatagggca gggcccgcgc cgggcgtatg
      601 ccgctttcct gcttcgccgg gttcaaccct tccggcaacg ccggcacggt gcgtcccggc
      661 agcgcagcgg cacgtgcggc caccgcgctc acgtcgggca ggccgcgcac gaacgggcgg
      721 gtatcgcgct gggcaaagtc gaaggcgccc gtcaggtcgc cgcagaccgc acggcgccac
      781 ggcgagatgt ccggcgcggc cacgccaaag cggcgttcga tcaggcgtat gaccgaggtg
      841 tggtcgtaca cctgtgaatc gacccagccg ccgcggctcc acggcgaaat cacgtacagc
      901 ggcacgcgcg ggccgagccc atacgggcgg ccgcgcagct cggcggcatc gtatttttca
      961 tcacccggtg ccggatgacg gtgatactcg ccgtcggtac tgaccgatga ggcgccggcc
     1021 cagccgccgt ccacgggcga aggcggtgcc ggtggcggca tgtggtcgaa gaagccgtcg
     1081 ttctcgtcga acatcaacag cagtgccgta cggctccaga cctccgggtc ggcggtcagc
     1141 gcgtccagca cgcgcgcggt ataggccgcg ccctgggcgg gactggacgg gccgggatgc
     1201 tcgctgccgg cggcgtcggc gatgatgaaa ctgacctgtg gcaggcgccc atcaagcacg
     1261 tcctggcgca gctgcgccag cccacgggtg ctgacgccgc gcgcgcgcag ctgtgggtca
     1321 tgcccgggcg cagcgctgta ggcgcgacgg aacgcctcaa agccggccag tgggttgtcg
     1381 gtgaagttgt cggccatgtc ctggtagatc tgccaggaca cgctcgcctg ctgcaggcgt
     1441 tcgacatagc tgctccagcg gtacgacgcc ggatgcccgc cgtattcggg gaagttgtcg
     1501 tgcgagttgg cgatcaccgg gccaccggcg cgcgcggcgg catcgttgtg cccggtccac
     1561 aggaacaccc ggttcgggtt ggtgccggcc tgcatcgcgc agtggtaggc gtcgcagatc
     1621 gtgaaggcat cggccagcgc gaactggaac ggcaggtcgc tgcgctggaa gtagcccatc
     1681 gagtgattct gcttggcctt cggccattgc cccatgcggc cgtggtccca ggcgcgctgc
     1741 gcatcgggcc aggtgtgcgg ggtgccttcc acgcgcatgt agccgaagtg cgcggcggta
     1801 tccagcggga acggcgcgat cgcgcgcttg ccgctggcgt cgggttgcag ccacaggctg
     1861 cgggtgcggc caccggcctc cagtgcagcg gccggcgcaa cgaagcgatc gccgaagcca
     1921 cgcacgcccg gcagcgtgcc gaagtagtgg tcgaacgagc ggttttcctg catcaacacc
     1981 acgatgtgct gcaggtcttc gaggctgcgc gtctgcgtgg caggggcgat cgctgcggcc
     2041 cgggcgatgc tgggcagcag cggggaaagg ccggcggcaa cgccggcctg caacaaccgg
     2101 cgtcggccga tatcggtcac gggctcactc acaggtccac acggaaggag atgccgacgg
     2161 tgcgcggtgc gccgatgaag gcgttgtcgc ggccgtccac ccctgcaaga taccgcttgt
     2221 cggtcagatt gctcaccacc aggttggcgc ccatgccctt caggcgcggg gacaggccct
     2281 gcaggtcgaa gccgatgttg gcgttgaaca cggtggccga cggcagcttg ttgacgttgg
     2341 ccgcgtccag gtagcgggtg cccaggtagc ggccggacag gccgaagttc cagttcgcac
     2401 cctgccagtc ggccgacagc accagggtgt tctccggctg gccgatcacc ttggcgccgt
     2461 cgacgatgcc cagctgggtg tcgcgcgcgg cgttgccgct gcccaggtac ttggagcggt
     2521 tgtaggtgta ggccgcattg atccgccagc cgttgtccca gccatagccg aacgccgctt
     2581 ccaggccgtt gctttccacg ccgccgaagt tctcgtagac gccgtcggtc tcgcccaggt
     2641 agtcgatgcc gctgacgaag ccggccggca ggtagacgat gcggttgtcg aacttgatgt
     2701 tgtacagggt gaccgaggcg gtcagcggcc agcggctgat gcgcatgcct acttcgatgt
     2761 tgtcggcggt ttccggctcg acgttgcgga agcgctgcgg gtcggtctcg cccagcacgc
     2821 cggaggggat ggcggcgaag ttctgcgaga agccggcgaa cagctccatg ccttccacgc
     2881 ccggcgccca ggtgaagccg gtggacagca gcgggtcgga cttggaatcg gatttcacgt
     2941 gctcgctggc accgatcacg cgacggcgtg actggtcgac gaagaactgc ttcacgccca
     3001 ggcgcgcact gaacgggccg aagcgcgcga cgtcctcgac gtagtacatc tgctcgtcaa
     3061 ccttgtactt gtcctcgaac tgcacccagt agggctggtg atcgaaggcg atgctctggc
     3121 cgacattgag caggcggtgc cagtcgcggc gcgccgaacg gtccagcttc tccacccaca
     3181 ggccgccacg gatcgtgttg tcgaccgcgc cgaagctctg ccgccattca acgtcggcgg
     3241 tcacgcccat gcggtcgttg tcgtagtggg tgtggcggta ggactgcgcg cccagtacgt
     3301 tgccggcgta gcagttcggg tcgtactcgg cggtgaagcc cagccgcggg gtgcagctgg
     3361 ccaggcgctg cgcggcgctg ccatcgggat tgacgaagaa gatctggccg cgattgctgc
     3421 cgccgtagaa cgtcttgccg ccgatgtatt ccgactccgg gcgaccggca ccgtcatcgc
     3481 tgacctgcgc caggtacggc ggcagccagt cgccgcgccc ttccatgcgg tgcccgtagg
     3541 ccgccaccga ggccttgaag ccgttgccgc catcgaaggc ggcgcgcagg tagccgaagg
     3601 tgttctcgcg cagcgcacgc gaaccggagc ggtagttctg gtccaggtac ggaatgccgg
     3661 tgagcgtgcc caccagattg tcacggtccg ggttggtggc gaaaccggcg ggcgagacac
     3721 tggtgtactc gggttcgtcg gcatcgttgt aggacaggta gccggtcagc gtccagcggt
     3781 ccagttcggt gatgaacttg ccggcgatat ggtcgttgct ggcgtggccg gtgccatcga
     3841 tccaatcgtg caccttggac gaggaagcgc tgacccaggc gcgggtgtgg ccgccgagca
     3901 ggccggtgtc atagcgcacg tagtacttgc gtgcgtcgtt gtcaccggcg ccgatcacga
     3961 agcgcaggcg gctgtcctgc agcgggtcgc tggtgaggaa gttcagcgta ccgcccagcg
     4021 cctcgttcga gcgcgaggag atgtcggcgg tgccctggct gacttccacc gtttccagat
     4081 cgagggtgtc gatgtagcgg ttggccagcg aaccgccacc gtagccggag ccaccattgg
     4141 gcaggccgtc gatggtggtg ccgatctgct gggtgtcgcg gttggtgacg aagccacgca
     4201 tgctgatctg cgtaccccac accgacgagc cggtggcgtc ggcctcgctg accaccacgc
     4261 ccggcacttc attgagcgcg tcgttgacac tgctcatcac cgtctgccgg ttcagcgtct
     4321 cggcgcgtac cgaggtcttg gcgtagctgg tggcctggcc gatcacctgc acctggtcca
     4381 gcgtacgggc gtcgctgctg cgcgcttcgg ccgtctcgcc ctgcggtgct tcggccaggg
     4441 cgtccagtgc gggggcgatc agcagggcaa gcagcgaaat acggggaaag cgcgcaatcg
     4501 ttcgcatcga aaccggacct gcaagagagg gaagccccgg agtgtcggta gtgccaatga
     4561 catcggcatg acgtggccac gcaactacga tggcactgtg gggccggtca ccgccttcgg
     4621 gtatgctcgg cgcttcaatg gagctgaggt gctggcgatg cggaagcggt cgaagatctg
     4681 gctggggggc gcagcactgg tgctgctggc agggtgcaac cgggcgccat caggcgaaca
     4741 ggcgggcgca cagcctccgc cgcccaccgc cggtgagaac gccgcacccg aggcagcgcc
     4801 gccggcgtcc tccgctgcgg ccgatggcgc cgcactcacc gaccgcgatg gcaagccggt
     4861 gccgctggtg ccgttcgaca ccggcagcgt gccgctgagc gctgctgcgt tgggcgaact
     4921 gccgttcttc agcctgccgc agggctatgc gccgcagaac gcaccgcacc cgcgcgcgtg
     4981 ggcacgtttt ccgttccgca tgggcgaggg cgtgcattgg gtggaaggcc cgagctggtc
     5041 ggcacgcatc gtggccgaca gtgaagcggc acccgacaag gcgttctccg cactggaagt
     5101 gcagcgcaac ttcgacggtg tgatcacggc cgccggtggg cgcaaggtgt ttgaaggcgc
     5161 gctgctgcgc gatatctact atggcccgca gctggaaggc gagatcggtg gcggcttcat
     5221 cgatgcggtg aatggcgaac aggacgcgcc caccacggtc tacgtgctgc gccaggccaa
     5281 ccgcaccgtc tggctgcagc tggcggtgga cagcaacggc gctggcctgg tggtggtgga
     5341 tgaagtgccg ttcaaggcca ctgcgcggtg gtcggacagc ttcccgcacc tgtccctgcc
     5401 ggctggctat ggcgaccgca acaaggccca gcaacgtgat ttcgatgcgt tcccgttctg
     5461 gaccggcgat cacttcgagc aggtcgaggg tcgtaccttc gccgtcgatt tcgacaaggg
     5521 tgagcgcgag tactcgatgc acgaagtgcg ccgcaacctg gaagcgatga tggcccaggt
     5581 caacggcacc aaggtgttcg aggggcgcat cccgcgcgag gcggccgagg gggtgccgaa
     5641 gccggtgcag tcggcctaca gcaatgcagc cagcttcaac tggaacaact acgacagcgt
     5701 ggtctaccgc gtcgatctgg ccgatggccg ccaggtgtgg gtgcacgcgc ggctggaata
     5761 cctcagtgcc ggctgggtgg tggccgaacg caagggtttc acccagaccg cggcgctgct
     5821 gccggccgat gcgttgaaga agaagctgga cagcgacggc cgagtggcga tccaggtcaa
     5881 cttcgccacc gacaaggcgc agatcctgcc ggcctccgaa gcgcagctgg cgcaggtgct
     5941 gcagcttctg cagggtgatc ctgcgttgaa gctgtcgatt gaaggccaca ccgacaacag
     6001 tggcgccgtg gcgcataacc gcagcctgtc ggaggatcgc gcacggtcgg tggtggccgc
     6061 gctgaccgcc aggggcatcg ccgccgatcg cctgcaggcg gccggcttcg gtgcggacaa
     6121 gccggtggcc gacaatggca gcgaggacgg caaggcacgc aatcgccgcg tggagctggt
     6181 caagcgctga gcgggcgcct gctcagtacc gcgcgtcctt gggtttcggg tcgcgcggcc
     6241 agtccttgct cttgttggcg aagtccggcc gcggctgatt gatgaagtag ctggcgatgt
     6301 ccaccgcgtc ctggtcgggc atcacctgct gccccagcgg cggctcgcgg gttaccgccg
     6361 gtggcatgtt gtgcttgacg aagccggcgg ccttgtacag ccgcgccatg ccagcgccga
     6421 tgttgaagct gtgctcaccc cacagtggcg ggaaggcgat gtcaccgctg gcatcacgcc
     6481 ggccttcgcc attgtcgcca tggcaggccg cacactgggc ggcgtacagc gcctggccgc
     6541 ggatcgggtc cggggtcagc gtgctgtcga tcggcccttc actgggcgca gccacgcggg
     6601 cgccctcggg taccggactg ctcagccatg ccatgtagtc gagcatcgcg cgcatctgcg
     6661 gcgcgtcctt cggtagcggc ttgccgttca tcgaacgctg caggcagccg ttgatgcgct
     6721 cggtcagccc gatcaccctg cccgggcgcg gcatgtagcg cggataggca ccgccaccgg
     6781 tattgaagta gtggttgccg aagggccgct tgccctcggc catgtggcac gagttgcagt
     6841 tcagatcgtt gccgacattg tccggcaaca gccgtgcggt ctcgttgaga aggcggcgtc
     6901 cgagcatcac cgactcggcg ttgccgagcg cggcgatctc ttcggcgctg ggtggctggt
     6961 agtgcccgac caccttgccc tgcatatcga gcatatcgaa cgtgctggcc gtggcggcat
     7021 ccaggtccgg gtacagatgg cgataggcga gggtgccggc accggccagc accagggcgg
     7081 cgatcgcact gccgaacagc aggcgggaat gcttgcgcga gcgcttcatc gtgcggcctc
     7141 ctgcggaacg tagtgcaccg gcttgtcgcg caccacccgc cgcatgcgcg ccacgtcgac
     7201 ctcgctgacc gcgctggcct ggttgcccca gctgctgcgg atgaaggtca ggatctgtgc
     7261 cagctgtgcg ttcggcagct gctcgaagcc cggcatggtg aacgccatgc ggtcatgcgg
     7321 ggtatgtggc gtgcgcccac caatcaaggt cacctgcacc agcgagctgg gatcatcggc
     7381 gaatacgatc gagttgccgg ccagcgccgg gtatacgcgt ggcatgccgc ggccatcggc
     7441 gcggtggcag gcctggcagt gctcggcata ggccagcgag ccggccacgc ggtagtcgcc
     7501 attgcgcagc gctgcggtgg tggtgtcggt accggccgcc ccctgcgcgc tgcggccctc
     7561 gcgcgccggc agctgcttca gatagcgcgc catcgccagc aggtcggcgt cggacaggta
     7621 ctgcgtgctg tgttcgacca cgtcggccat gccaccgaag gccgccgagc gatcagtgcg
     7681 gccggtgcgc aggaagtcga cgatctcacc ttcgctccag ctggccaggc cggtcgactc
     7741 gttgcgcagg ttcttcgcgt accagccttc cagcaccgag ccggacaaga actggcggct
     7801 gccatcgtcg gccatcgcct tttcctggaa cgccaggccg cgtggggtgt gacaggcacc
     7861 gcaatgggcc aggccttcca ccagttcggc accgcgctgc tgcccggcat ccagcgacgg
     7921 gtccgggttg aaactgcgtg ggcgtgcgaa cagcagctgc caccacgcca gcggccaacg
     7981 catgttggcc ggccatggaa tcgtgctgtc ggcgttgtcc tgcctcaccg gctgcaccga
     8041 gcccatgaaa taggcgtaca gcgccttgat ctcggcgtcg ctggcgatca cgtacgaggc
     8101 atacggcatc gccggataca gcggctggcc atcgtggcgg atgccgcggc gtacggcgcg
     8161 ttcgaagtcg gcgtagtcgt aggcgccgat gccagtgtcc gggtcgggcg tgatgttggt
     8221 cgagtagatc gtgcccatcg gcgtctgcat gccgaggcca ccggcgaacg gcttgccgcc
     8281 aggcgcggta tggcaggccg cgcagtcggc ggcgcgcgac aggtattgcc cctgcgtgat
     8341 cagggctgga tcgtggatgt cgacctgcgc cgtctgtcgc ggtgcgaacc agtagggcgt
     8401 ggtgcgggcg atgccgtagg cggcggccac tgtggcggcc agggcaatgg cgagcttgag
     8461 cgaggtgcgc atggcggcac tgtgttcaat cctgcgggcg cgttcattga tccggatcaa
     8521 tgactgaacg gatacagctt gtgcaccaag ctgaatcgtt cctgcgttgt catcaagccg
     8581 tcatccgtgc gcgatagatg gaagggcgat tgaggcgtta acgtcccagc ctgtctgatt
     8641 tgcccctatg acgtgatatg aagcgcctgc tgctgctgtt gctggcgtgc gccggcctgt
     8701 ggctggctgc atgctcttcc tcgatcaatg cctcatccac ctcgctcgcc gacaggctga
     8761 tcgcgccagg tggcgtgtcg accctgctca atcgcccgcg catcgccgcg gccatcgccg
     8821 aactgcccaa ccgccacggc ttcgcaccgg gccgtgatgg cgtgccgatc ttctggcgcg
     8881 tgttcgatcc gggtgactac ggtgcgcgct accactacct gccgcagcgc cacgagaacg
     8941 gcctgccgct ggataccggg ctgagcctgg ccgtgccgca gccgttccgc gcgcaggcgc
     9001 cacgcggcac cgtggtgctg ctgcacggct ggatgatgaa cggcgattcg atgctgccgt
     9061 ggtcgctgca gctggccgaa tcgggctacc gcgtggtcac cctcgatcta cgcaaccacg
     9121 gccagtccgg tgcaggcccg tccggctatg gcacgtatga atccgacgac gtcgttgatg
     9181 tgatcggcga actgcgcgcg cgcggcgaga tcactggacc gctgtacctg ttcggtgtct
     9241 cctacggtgc cgccactgcg gtgttcaccg ccgacaagct gggtgaccag gtggctggag
     9301 tggtggcgat ggagtcgttc gccaatgccg gggtggcgat ccgcaccatg atcccgcacc
     9361 tgatggggct gcaaccggaa ggcctgaagg cgcaggcggt ggcgtcctac gcgcgctggc
     9421 gctacggcgg ccaggacatc aaccaggtga ttgccgccgc cagccgccgc atcgatgtcg
     9481 atctggaccg cgtggacgtg gcacgcgcgc tggccgatac ccgcgcctgc gtgctgctgc
     9541 tgcatgggca gggcgaccag catattccgg tcagccaggg ccgcgagctg gccctggcca
     9601 atccgcgcgc gcactacatc gagatgcgcg gcgaggacca catcaccctg ccgctgcggc
     9661 tggacctgct ggccggcgtg gtcgatgact ggatggcccg tgacgagcac cacccgaaga
     9721 gcgcgtgccc ggccccgcag ctgccggccc aggctgagtg gctggtgcac gacgctgcgg
     9781 atatgccggt gaaggccccg acgcgcggtt gaacaaaaag gggacggagg ggattaagtc
     9841 gtttgcagca cacccgaggc agatacgact taatcccctc cgtccccttt ttctgtcagg
     9901 gcaggcggcg tgccagtgag cgtgcggacg cggccacgcc gagcagcaac gcggccacgc
     9961 acaggaaggc gaagccgagg ctggtcacgt gcgcgagcgc gccgatcgcg gccggaccgg
    10021 cgaggatgcc ggcgtagccc agcgtggtca ccgccgtgat ggcgatgctc tccggcatca
    10081 cccgctgctg gccggccatc gagaacagcg ccggcacgat gttggcgcag cccagcccga
    10141 ccaggacgta gccggccagc gccaccggga acgacgctac cagcgtggcc aggccgaaac
    10201 cggcggccgc ggtgatgcca ccgatgacaa tcgtgcgcgt tcgcccgagg cgctcgacga
    10261 tgccgtcgcc gaacaggcgc atcgcggtca tcgccagcgt gaacaatgcg aagccggctc
    10321 ccgcctggtc gcgcggcacc tgccgcactt ccgccaggaa caccgcgctc cagtccagca
    10381 tcgagccctc ggcgaggaac accacgaacg ccagcacccc gatgaacagc accacgccat
    10441 gcggcagtgc cagcaggggg ccttcatgca ggatgcgctg cggtcgccag tgcggggccg
    10501 ccaaggctgc gaccagcagc agtatggcaa ccgacaccag cgcggccagc cacagcggcg
    10561 tgccgagaat cagcaggccg gtcatgcagc cggcaccgac gaagccgccg atgctgtaga
    10621 aggcgtggaa gccggacatc atcgcgcgcc cggcatcgcg ctcgacggcc accgcctgca
    10681 tgttcatcgc acagtccagt gcccctacgc cggcgccgaa cacgaacagc gccgcgccca
    10741 gtgccatggg tgaaggggcc agtaccagca gcggcagcgc gcacagcatc atggcgcagg
    10801 tgatgaccat cacccgacgg cagcccagtc gcccggtcag tgcgcccgcc aaaggcatcg
    10861 ccagcagcga gcccaggccc aggcacagca gcaccgcgcc aaggctggcg tcggacagcc
    10921 cggccttggc cttggcgtag ggcaccatcg gcgcccacgc ggcggtggcg aatccgggaa
    10981 tgaagaaggc ggcacgggta gcgtgctgct gggcaagcgg ggatgaaggc gtcatgcgcg
    11041 gtgcgaagct ccagaggaac gcccatggaa acgttttcac gtgagatcgg caagtgccct
    11101 gcatgacatt ggacgacgca tacgattgca gtgacccgat tgcgtcacca gtggttaacg
    11161 ccgcccacgg acagtggctg cacggtcggc attccgccgg ccgctgccgg agatccatac
    11221 atgagcacga caccgaccat cctcctcgtc catggattct ggggcggggc cgcacactgg
    11281 gccaaggtga tcctggaact gcatcgcaac ggccatgacc gcgtgcaggc ggtggaactg
    11341 ccactcacct cgctggccga cgatgcagga cgcacccaga agatgatccg gcagatcgac
    11401 gggccggtgc tgctggtcgg ccattcctat ggtggcgcag tgatcagcca ggccggcaac
    11461 gaggccaacg tgaaggggct ggtctatatc gcggcctttg ccctggatgc cggcgaaagc
    11521 ccgggcggca tcacccagca gcatctgccg gaagccgcgc cgaatctggc accggacagc
    11581 gacggctacc tgtggctgcg cgcggacaaa ttccatgaga gtttctgcca ggacctgagc
    11641 gccgacgaag gccgggtgat ggcagtgacc cagaaggcgc cgctggccag caccttcggc
    11701 gatgcggtca gtgacccggc ctggaagcac cggccgagct ggtaccagtt gtcccgccat
    11761 gaccgcatga tcgcgccgga gaaccagaag gccatggctg gcaggatgca gcccaagcgc
    11821 ctgctggaac tggacgccag ccatgcttcg ctggcctcga agcccgtcga ggtgagtgcg
    11881 ctgatcctgg aggcctgcgc caccatcggc ggttgatccc gcgtcatcgc gacgcacgac
    11941 agcacatcgc acgacagccg gggcgcaggg gagtacactc ctgcgcctgc ggccacccgg
    12001 ccgaatcccc atcccctcca gccgtcgcca gaggatccca cccgatcgtg gaggtcctgt
    12061 cgtgcagtac gtgcccgttg tccgtcttcc gtcctcattg ccgcgtcgcc gcttgctgcc
    12121 gcaggcgctc gcgcagagcc tgctgatcac cgcactggcc agcagtggca tcgccgccgc
    12181 gcagtccacc gatgacggcg acaaggccac gcagacgccc gcctcgcaga ccctgcagac
    12241 cgtgcaggtc accgccaacc agctgggtac catcaccgaa ggcagcggcg cctacacacc
    12301 tggcaccatc gcgaccgcca cccgcctggt gctgacgcca cggcagacac cgcagaccat
    12361 cagcgtgatc acccgtgcgg agatggatga ctttggcctg cacggcatcg acgacgtgat
    12421 gcgggtgacc ccgggcatca gcatcgtcac ctacgacagc gagcgcaccg agtactacgc
    12481 acgtggtttc gccgtgcaga acttccagta cgacggcatc ccgatgtcgc gtgactcggc
    12541 ctattcggcc ggcaacacgc tcagcgacac cgccatctac gaccgcatcg aagtgctcaa
    12601 gggcgctacc ggcctgttga ccggcatggg cgatcccggc gcgaccatca acctggtgcg
    12661 caagaagccg ggcagggagt tcgctggcag cgcctcgctg ggtgtcggcc gctgggacga
    12721 ctaccgtgcc gagctcgatg tcggtggccc gctgactgcc gatggccgcg tacgcggccg
    12781 cgcggtgggg gcatgggaag acaagcattc caacctcgac cactaccagc gcaccagcaa
    12841 ggtcggctac gcagtgctgg aagccgatct gggcgagcgc acgctactga ccgtgggtgg
    12901 cgatgcgatg gacagcgatc cgaagggttc gacgtggggc ggtattccgc tgctggacag
    12961 tgccggcaac ttcaaccgca tgccgcgctc gttcaacaac ggcgcacgct gggccggctg
    13021 gcgtcagtat gtgcgcactg gttttgccac gctggagcat acgttctcca acgactgggt
    13081 ggccaagctg cagctcaacc accaggtcaa cggttacgac gctgcgctgg ccggtgccgc
    13141 cgcgggcaat cccgatccgt tgaccggaga aggcgtcagc ctgtggctcg gcaagtacgt
    13201 cggaaagacg gtcagcaacg ccgccgactt ctatgtgagc gggcatttcg gcctgttcgg
    13261 ccgcgcgcat gagctggtga tcggcggcag tgcctcgcgc aagcgctgga ccaataccgg
    13321 ctacggccca caggatggtt tccccgatac agtgccggac tatcgccgct gggacggcga
    13381 catcgccgag ccgcaatggc agcgcagcta cgacaacaac gaagtgaccc gtgagaacgg
    13441 cctgtacgtg gtcggccgtt ttgacctggc cgatccgctg aaggtgatcg ttggcagccg
    13501 cctggccagc taccgctcgc cgcagacgcg cgagaccggc gtgttcgtgc cgtacgccgg
    13561 cgtggtctac gacctcggcg agcactattc ggtgtacgcc agctacagca ccatcttcaa
    13621 gccgcagggc gagcgtgacg agcagggcaa ggcgctggat ccgctggaag gccgcagcta
    13681 cgaaatgggc ctgaaggccg agttcctcga tggccgcttc aacgccagtg cagcgctgtt
    13741 ccagcttgac caggacaact tcgcccagcc caccggtggc aagacaccgg atgggcagga
    13801 tgcctatcgc gccttgatgg gcgtgcggac caagggctac gagctggaaa tgtcgggcca
    13861 gttggccgag ggctggcagg tgcagggtgg gttctcgcac aagatcgcgc gccaggcggg
    13921 caccaaggtg accacgctgg aaccggagaa ccagttcagc ctgcactcca gctaccgcct
    13981 gcgcggtgcc tggcagggac tgacgctggg cggtggtgcg cgctggcagg attcgacctt
    14041 cggcgagatc accaatccgg ccacgcaggc caaggtggtg catcgcaccc agccttactg
    14101 gctgctcgat gcgatggcgc gctatgaatt caacgatcgc ctgtcggcca cgctcaacgt
    14161 caacaacctg ctcgacaagc gttactacac catcttcagc tggtacagca cctacacctg
    14221 gggcgagccg cgcaacgtgc ggctgacctt gaactacaag ttctgacgcg gatctacagc
    14281 aatgtgcccg cgatgccatc cagcatcgcg ggcgttgccg ttacagcggc aggtcgaaca
    14341 ccagcacttc ggcgtcgttg ccgttttcca gggtcagctg cgcttcgtcg ctgacctgca
    14401 gcgcatcacc ggcttcaagg gtgatgccgt tcacctgcaa ctggccacgg gccacctgca
    14461 cgtaggcgcc acgaccgttg ccgagcgcat ggtgcagctt ctggccgcca tcgaggatgg
    14521 tggcgaagat gcgggcatcc tggtggatgc gcagcgaacc gtcggcaccg tccggcgaag
    14581 cgatcaggcg cagctggccg cgcttgctgt ccggtgtgaa gtgggtctcc tcgtaggacg
    14641 gggtgatgtt ctccgcatcc gggaagatcc agatctgcag gaagtgcacg gtctcgtcgg
    14701 ccgagtggtt gaactcgctg tggctgacac cgctgccggc gctcatgcgc tgcacgtcgc
    14761 cgtagcgcag caccgagccg gtgcccatcg agtccttgtg ctccagcgcg ccgcccagca
    14821 cgtaggaaac gatctccatg ttgctgtggc tgtgggtgcc gaagccctgg ccgccaatca
    14881 ccttgtcttc gttgatcacc cgcagcgggc cgaagctgac gtagcggggg tcgtagtagt
    14941 tggcgaagga gaaggtatgg cgggaggaca gccagccatg ctcggccagg ccacgggtag
    15001 cgctcttgcg gatctgcagc atgatggaat ttccttgttc gatggtttcg atggggcggg
    15061 gtggggcggt agccgccgtg tttccccgtt ggagagaagt atccgcttgc gcccggggtt
    15121 tgaaaaacgg atagttttga cagccatcat cgaaaaattc gaatgctcaa gctcagcctc
    15181 gatgccctgc agatcctcga tgccattgac cgccgcggct cgttcgccgg cgccggcaag
    15241 gccctgcaca aggtgccctc gaccatttcc tacaccgtgg ccaagctgga agaagacctg
    15301 ggcgtgcagc tgttcgaccg ggtcgggccg cgcgccgagc cgaccgaggc cggccgcgcc
    15361 ctgctggacg agggccggca ccttctgcgc gcggcccgcg aactggagct gcgggtgcgc
    15421 cgggtggcat cgggctggga gaccgagctg accctggcgg tggattcggt gttcccgacc
    15481 tggctgctgg gccctgacat cgccgcattc cgtgaggccg aggcgccgac ccggctgcgg
    15541 ctgatcggcg aggcactgtc cggcacctgg gaagcgctgc tcgacagacg tgccgacctg
    15601 ctggtgggcg caccgggcga gggccccagt ggcggtgggt atgtggtcga gccgctgggc
    15661 acggtggcgt tcgtgttcgc ggttgcgccc aaccatccct tggccgcggt ggagggcgtg
    15721 ctgggtcgcg agcaactggt cgagcattgc gcgattgccg tttccgattc ggcgcggcgg
    15781 ctgctgccgc gcacggttgg cctgttgatg gggcaggaga tgctgacggt gccggacatg
    15841 gccagcaagc tgaagctgca gtgcgagggt gtcggcttcg gtttcctgcc cgagccgtgc
    15901 gcgcgcgcgg cggtggcgcg cggccagctg gtgatccgcg aggtggagga acacaagccg
    15961 gaagagacct tctggctggc ctggcgcacg ggtgaggatg gcgcggcact gcgctggtgg
    16021 cgagagcgcc tgcgcagacc ggagctgctg tcgcagtggt ggcaggcaat ggccaggggg
    16081 taggggattt ggcagggctg cgccctgcac ccgctacggg ctggagcaac agc
//
LOCUS       DAOKIP010000081        16126 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.081,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000081 DAOKIP010000000
VERSION     DAOKIP010000081.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 16126)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16126)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16126
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.081"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(84..2039)
                     /locus_tag="QEL58_002148"
     CDS             complement(84..2039)
                     /locus_tag="QEL58_002148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005920425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HDS1676620.1"
                     /translation="MLQKLRDKTSGWIVTVILGLLMIPFLFVIDNSYLGGVGAQNVAK
                     VSAPPTWWRSAPSWWPVRMLWQHHEISAQDFRTRFEQERMRERQQQGENFDPRAFEST
                     ENKLAVLDQLIDEQVVRLVGEQAGVVIGDGAVREYIATIPAFLDSNGKFNENNYRLAL
                     AGGNPPRTPTQFQELVRESLQQSVIPSGLQNSGFVTQSETERLLKLLGETRDVELAAL
                     PEVPADTAPVTDAQIKQWYDSHGKDFRQAESVSLEYVEINGANLPAPAAADEATLRKR
                     YEDEKAKFTSPEQRQAAHILITGDGAEAKANKIAAEAKAAGADFAALAKANSEDPGSK
                     AQGGDLGWVERGAMVKPFEDALFAAKAGDVIGPVKTDFGYHIIKVAAVRGGQGKSFEE
                     VRDTLAAEQLKADGERGFNELAGRLVDAINKSPSDLAAAAKEVKLPLQTLGPITRATA
                     SGIAADPAVLRAAFSDVLVQDGTASDPIALGGATNHSVVIRVSAHTPEQAMPLDKARE
                     QVIAAIRADRQRQASDKAADAVLAKLKGGATLQSLAASEKLQLSPMPGLPRSQPVPTP
                     DIHRAIFSAPAPVNGKPSYGKVDVNGHALLFAVNKINPGDIKEVTAEQQKQLKDQLSQ
                     IDGMAAAKAYVEAMRKKFVVQTTEANL"
     gene            complement(2187..2263)
                     /locus_tag="QEL58_002149"
     tRNA            complement(2187..2263)
                     /locus_tag="QEL58_002149"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2227..2229),aa:Asp,seq:gtc)
     gene            complement(2370..2446)
                     /locus_tag="QEL58_002150"
     tRNA            complement(2370..2446)
                     /locus_tag="QEL58_002150"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2410..2412),aa:Asp,seq:gtc)
     gene            complement(2534..2610)
                     /locus_tag="QEL58_002151"
     tRNA            complement(2534..2610)
                     /locus_tag="QEL58_002151"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2574..2576),aa:Asp,seq:gtc)
     gene            complement(2695..2771)
                     /locus_tag="QEL58_002152"
     tRNA            complement(2695..2771)
                     /locus_tag="QEL58_002152"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2735..2737),aa:Asp,seq:gtc)
     gene            complement(2798..2872)
                     /locus_tag="QEL58_002153"
     tRNA            complement(2798..2872)
                     /locus_tag="QEL58_002153"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2838..2840),aa:Val,seq:tac)
     gene            complement(2884..3156)
                     /locus_tag="QEL58_002154"
     CDS             complement(2884..3156)
                     /locus_tag="QEL58_002154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016904732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HDS1676621.1"
                     /translation="MNKTELIDAVAEAADLTKAESSRAVDAVVAAVTKALKDGDAVTL
                     VGFGTFQVRDRAARTGRNPKTGDTIKIAASKNPSFKAGKALKDAVN"
     gene            complement(3374..5821)
                     /gene="lon"
                     /locus_tag="QEL58_002155"
     CDS             complement(3374..5821)
                     /gene="lon"
                     /locus_tag="QEL58_002155"
                     /EC_number="3.4.21.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006451748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endopeptidase La"
                     /protein_id="HDS1676622.1"
                     /translation="MARSPSETLDLPVLPLRDVVVFPHMVIPLFVGRDKSMHALEQAM
                     ESDKRILLLAQKSAETDDPHAADLYQVGTLAQVLQLLKLPDGTIKVLVEGLSRVQVTH
                     VDERNGSLHGQAVEIDATDEREAREVEAIARSLMSLFEQYVKTNRKLPPELLQTLSGI
                     DEPARLADTIAAHISVRLADKQRLLETLAVGDRLEMLVGLVDGEIDVQQMEKRIRGRV
                     KSQMEKSQREYYLNEQMKAIQKELGDLDDAPGELEELARKIAEAGMPKAVEAKARNEL
                     NKLKQMSPMSAEAAVVRNYLEWLLGVPWKKRSKVRKDLKAAQDTLDADHYGLEKVKER
                     ILEYLAVQSRVKQMKGPILCLVGPPGVGKTSLGQSIAKATNRKFVRMSLGGVRDEAEI
                     RGHRRTYVGSMPGRIVQNLNKVGSKNPLFVLDEIDKMSMDFRGDPSSALLEVLDPEQN
                     NAFNDHYLEVDLDLSEVMFVATSNSLNIPGPLLDRMEVIRIPGYTEDEKLNIATRYLV
                     PKQIKANGLQPEELEIGSDAIQDIVRYYTRESGVRNLEREIAKICRKVVKEIALAGPQ
                     PVKAKKGAKKKALVSVSSKNLDKYLGVRRFDFGRAEEENEIGLVTGLAWTEVGGDLLQ
                     IESTLVPGKGQLILTGQLGNVMKESASAALSVVRSRAVGFGIDSDFLQKHDVHLHVPD
                     GATPKDGPSAGAAMVTSLVSMLTKVPVRADVAMTGEITLRGRVTAIGGLKEKLLAALR
                     GGIRTVIIPEENRKDLADIPANVTRDLKIVPVKYIEEVLDLALERPLAPKKARKSAQR
                     VTVRSKAKPSGNARVKH"
     gene            complement(5964..7253)
                     /gene="clpX"
                     /locus_tag="QEL58_002156"
     CDS             complement(5964..7253)
                     /gene="clpX"
                     /locus_tag="QEL58_002156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019185803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     ClpX"
                     /protein_id="HDS1676623.1"
                     /translation="MSEDRQGRSTDTGKILYCSFCGKSQHEVRKLIAGPSVFICDECV
                     ELCNDIIREELEEKAQSARSSLPKPREILEVLDQYVIGQNRAKRTLAVAVYNHYKRIE
                     SRQKNDDVELAKSNILLVGPTGSGKTLLAETLARLLNVPFTMADATTLTEAGYVGEDV
                     ENIIQKLLQKCDYDVEKAQQGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIE
                     GTVASVPPQGGRKHPQQEFLQVDTKNILFICGGAFAGLDKVIQARSTDVGSIGFGAKV
                     KSSERKQEVGKVLAEVEPEDLIKFGLIPEFVGRLPVVATLEELDEPALIKILTEPKNA
                     ITKQFKKLFEMENVELEFRPDALSAIARKALKRKTGARGLRTIVESVLLDTMYDLPSQ
                     ENVSKVVVDESVIEHKSEPYLIYQTPAAPEQKAAGAE"
     gene            complement(7380..8006)
                     /gene="clpP"
                     /locus_tag="QEL58_002157"
     CDS             complement(7380..8006)
                     /gene="clpP"
                     /locus_tag="QEL58_002157"
                     /EC_number="3.4.21.92"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004146318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp endopeptidase proteolytic
                     subunit ClpP"
                     /protein_id="HDS1676624.1"
                     /translation="MDNRTKALNLVPMVVEQTSRGERAYDIYSRLLKERLIFLVGPID
                     DHMANVVVAQLLFLESENPEKDINIYINSPGGVVTAGMAIYDTMQYIKPNVSTTCIGQ
                     AASMGALLLAAGEAGKRYALPNSRVMIHQPLGGYQGQATDIDIHAREILTLRSRLNEV
                     LAKHTGQSLETIARDTERDNFKSAFEAQAYGLVDQVLERRPDESIQAG"
     gene            complement(8083..9378)
                     /locus_tag="QEL58_002158"
     CDS             complement(8083..9378)
                     /locus_tag="QEL58_002158"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trigger factor"
                     /protein_id="HDS1676625.1"
                     /translation="MQASIESTGNLERRLSFSLPEDRLQSHIVGRLGEIARTTRIKGF
                     RPGKVPAKVIEQRFGAQVRGEALDGLLRETFDAAVREHDLRIVGSPRIDKGDEGEFSF
                     VATVEVVPDFGDIDVSKLTVVRHSAEITDADIDQMIENLQNQRRTWAPVSRGAQDGDL
                     VAVETWSQAGEERLPAEGTEKGSIVLGQGMMFDTIEKGLVGLAKGEEKTLDVEFPADW
                     RVPVLAGKTVQVTVKVAEVSEPVVPAVDEAFIKSFGVKGGDVEQFRSDIRANLERELK
                     GALMNRLRREVGEQLIAAYASVEMPPRLVENEARAMLAQQVEQIRRNGQNVGEIPADA
                     HEGFKDAAAKRVLVGLLVGEVARTNDLRLEAKRLNETMRLIASTYEEPEQVIEMYRND
                     PQLMSGLQNRVMEEQVIDWIAERAQHTEEKLSFQDAIRQ"
     gene            complement(9568..9652)
                     /locus_tag="QEL58_002159"
     tRNA            complement(9568..9652)
                     /locus_tag="QEL58_002159"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(9616..9618),aa:Leu,seq:tag)
     gene            complement(9763..10050)
                     /locus_tag="QEL58_002160"
     CDS             complement(9763..10050)
                     /locus_tag="QEL58_002160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004146297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676626.1"
                     /translation="MADINRLRTMARVPVALVALVALVACAPGSDPAQTVERDANVEA
                     VPARPVSPEGGAAPDVVELRRADEGGVEVREADPAAGQGAATAPARTEPPH"
     gene            complement(10271..10346)
                     /locus_tag="QEL58_002161"
     tRNA            complement(10271..10346)
                     /locus_tag="QEL58_002161"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(10311..10313),aa:Lys,seq:ctt)
     gene            complement(10543..10618)
                     /locus_tag="QEL58_002162"
     tRNA            complement(10543..10618)
                     /locus_tag="QEL58_002162"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(10583..10585),aa:Lys,seq:ctt)
     gene            complement(10698..10774)
                     /locus_tag="QEL58_002163"
     tRNA            complement(10698..10774)
                     /locus_tag="QEL58_002163"
                     /product="tRNA-His"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(10738..10740),aa:His,seq:gtg)
     gene            complement(10948..11024)
                     /locus_tag="QEL58_002164"
     tRNA            complement(10948..11024)
                     /locus_tag="QEL58_002164"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(10988..10990),aa:Arg,seq:tct)
     gene            complement(11064..11140)
                     /locus_tag="QEL58_002165"
     tRNA            complement(11064..11140)
                     /locus_tag="QEL58_002165"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(11104..11106),aa:Pro,seq:tgg)
     gene            11321..12079
                     /locus_tag="QEL58_002166"
     CDS             11321..12079
                     /locus_tag="QEL58_002166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005415466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bax inhibitor-1/YccA family protein"
                     /protein_id="HDS1676627.1"
                     /translation="MRSGNPALSESTFLDLASGSVVTSPGQVMTLNGTANKTGILLLL
                     AVLTAAFAWNQSVNEYGEVMGAAKLYAMGGAIGGLVLALITIFKKEWSPVTAPMYALV
                     EGLFLGAVSALFNMKYPGIVFQAVLLTFGTLAALLFAYRSGVIKATENFKMGVVAATG
                     GIALLYLASFVLGFFNINVPVIHDSSWLGIAFSLFVVVVAALNLVLDFDFIETGVAQR
                     APKYMEWYGAFGLMVTLVWLYIEFLRLLSKIQQR"
     gene            complement(12139..12888)
                     /locus_tag="QEL58_002167"
     CDS             complement(12139..12888)
                     /locus_tag="QEL58_002167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005408264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HDS1676628.1"
                     /translation="MESVYLLVALGAIVAGFVQGLSGFAFGMVAMSFWAWGLEPRLAA
                     TLSVFGALVGQLVAVFTVRRGFNLRLLLPFVLGGLAGIPLGVMVLPQLDMEWFKALLG
                     GFLALWCPVMLMARSLPPIRAGGRLGDAIAGMAGGVLSGIGGFAGPVPTLWSTLRGFG
                     KDEQRAVIQNFNLAMLAVTMATYVGSGLVNRQMLPYFAIVAPAMLVPALLGARVYIGI
                     SEARFRQLVLSLLTASGIALLASSLPALLAR"
     gene            complement(12914..13822)
                     /locus_tag="QEL58_002168"
     CDS             complement(12914..13822)
                     /locus_tag="QEL58_002168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019336561.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDS1676629.1"
                     /translation="MDQFAALRALRAIVDAGSFTAAAERLGTTHSAMSRQLRQLEEHL
                     QVRLLDRNSRRLSLTEAGRDYYREAGALLDRLQEADDRVRAGQAQPSGIVRISVPQVV
                     ASQELPHWLPSFLQRYPQVALDLSADDQLVDVVGGGFDLALRIAPSLPDSQLVARELA
                     SCPRILVAAPGYLARHGLPRQASDLAQHLLLGFSPTPALPPWQLHGPRGATASIEAGQ
                     RLRVDATPALYAAALGGMGISLFTALTVQEDLRAGRLIRVLPAWHAGQRRYFALYPHA
                     RALAPKVRALVEHLAAHYAAQSGAAG"
     gene            complement(13876..14619)
                     /locus_tag="QEL58_002169"
     CDS             complement(13876..14619)
                     /locus_tag="QEL58_002169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005415464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine hydrolase"
                     /protein_id="HDS1676630.1"
                     /translation="MNLTAFGLASLIGMAATAPVVAAEPAHPTIRHMAGAPVPASLDA
                     AKTAVLVIDFQNEYFDAKAAPGFAGGRMVIPDGVAALRQTRRLIDFADANGIRVIHVQ
                     HVLPAGAPLFAQGSANAAFHRDMQPRAGETVVQKDNVSVFAGGSAAVIDTVLKQAGID
                     TLIVTGLQTHACVAGAARDAAAAPRGYRVIVSSDATASRDLDLAGGQHIGHRALHEAA
                     LAQIEDTFGDVMTTDAILALPVRKAGGGA"
     gene            complement(14879..15883)
                     /locus_tag="QEL58_002170"
     CDS             complement(14879..15883)
                     /locus_tag="QEL58_002170"
                     /EC_number="1.1.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020852046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate dehydrogenase"
                     /protein_id="HDS1676631.1"
                     /translation="MTQKITVIRGDGIGPEIMDATLFVLDQLKTGLEYEDADAGLVAL
                     EKHGDLMPAVTLESIARNKVALKSPLTTPVGGGFTSINVSLRRHFDLYANVRPAHTFP
                     NTKSRFDNVDLITVRENTEGAYLAEGQEVSADGETAFSGTRITRKGSERIVRYAFELA
                     KSTGRKKVTAVHKANIIKSTSGLFLNVAREVAAQYPEIEFQEMIVDNCCMQLVMRPEQ
                     FDVIVTTNLFGDIISDLCAGLVGGLGLAPGANIGKDAAIFEAVHGTAPDIAGQGKANP
                     CALLLAAAQMLDHVGQPENAERLRKAIVATMEAKDSLTGDLGGTGTTMSFAQAIASRL
                     "
BASE COUNT         2712 a         5347 c         5105 g         2962 t
ORIGIN      
        1 cggtcgagca agttcggcgc caaccggctc cacaaaaaag gcccggcaat gccgggcctt
       61 ttcgttcctg ctcgccgcgg ggcttacagg ttggcttcgg tggtctggac cacgaacttc
      121 ttgcgcatgg cctcgacgta ggccttggct gccgccatgc catcgatctg gctcagctgg
      181 tccttcagct gcttctgctg ctcggcggtc acttccttga tgtcgcccgg gttgatcttg
      241 ttcaccgcga acagcagcgc gtggccgttc acgtcaacct tgccgtagct cggcttgcca
      301 ttgaccggcg ccggcgcact gaagatcgcg cggtggatgt ccggggtcgg caccggctgg
      361 ctgcgcggca ggcccggcat cgggctcagc tgcagcttct cgctggccgc cagcgactgc
      421 agggtggcgc cgcccttcag cttggccagc acggcgtcag cagccttgtc gctggcctgg
      481 cgctggcgat cggcgcggat cgcggcaatc acctgctcgc gggccttgtc cagcggcatc
      541 gcctgttccg gcgtatgcgc ggagacgcgg atgaccacac tgtggttggt ggcgccgccc
      601 agggcgatcg ggtcgctggc ggtgccgtcc tgtaccagca cgtcggagaa cgcagcgcgc
      661 agcactgccg gatcagcggc gatgccgctg gcggtggcgc gggtgatcgg gcccagggtc
      721 tgcagcggca gcttcacttc cttggctgca gccgccagat cgctcgggct cttgttgatg
      781 gcgtcgacca ggcggccagc cagctcgttg aagccgcgct caccatcggc cttcagctgc
      841 tcggcggcca gcgtgtcacg cacttcctcg aacgacttgc cctggccacc gcgcacagcg
      901 gccaccttga tgatgtggta gccgaagtcg gtcttgaccg ggccgatcac gtcgccggcc
      961 ttggcggcga acagtgcgtc ttcgaacggc ttgaccatcg cgccacgctc gacccaaccc
     1021 aggtcaccgc cctgcgcctt cgagcccgga tcttccgagt tggccttggc cagcgcggcg
     1081 aagtcggcgc cggcggcctt ggcttcggcg gcaatcttgt tggccttggc ttcggcaccg
     1141 tcgccggtga tcaggatgtg ggcggcctgg cgctgctccg gcgaggtgaa cttcgccttc
     1201 tcgtcttcat agcgcttgcg cagggtcgct tcgtcggccg cggccggtgc cggcaggttg
     1261 gcgccgttga tctcaacata ctccagcgac acgctctcgg cctggcggaa atccttgccg
     1321 tggctgtcat accactgctt gatctgcgca tcggtgaccg gcgcggtatc ggccggcact
     1381 tccggcagcg cggccagctc gacgtcacgg gtctcgccca gcagcttcag caggcgctcg
     1441 gtctcggact gggtgacgaa accggagttc tgcaggcccg acggaatcac cgactgctgc
     1501 aggctctcac gcaccagttc ctggaactgg gtcggggtac gcggcggatt gccaccggcc
     1561 agcgccaggc ggtagttgtt ctcgttgaac ttgccgttcg aatcgaggaa ggccgggatg
     1621 gtggcgatgt actcgcgcac ggcaccatcg ccgatcacga cgccggcctg ctcacccacc
     1681 aggcgcacga cctgctcgtc gatcagctgg tcgagcacgg ccagcttgtt ttcggtgctt
     1741 tcgaacgcgc gcgggtcgaa gttctcgccc tgctgctggc gctcgcgcat gcgttcctgt
     1801 tcgaaacggg tgcggaaatc ctgcgcgctg atctcgtggt gctgccacaa catgcgcacc
     1861 ggccaccacg acggcgcaga acgccaccag gtcggaggtg cggaaacctt ggccacgttc
     1921 tgagcgccaa cgccaccgag gtagctgttg tcgatcacga acaggaacgg aatcatcagc
     1981 agccccagga tcacggtgac gatccagcct gaggtcttgt cgcggagttt ctgcagcatg
     2041 gtgaggaatc acaaggcctg attggcgagc ccggcagtgt aacccgcttc gccgcaggga
     2101 ccaaaagcag caccggcgcg gcctgcgcgc ctcatcacca gcacacaaag aaaaagcccc
     2161 cggcgtgtgc cgagggcttt tagagttggc ggagcggacg ggactcgaac ccgcgacctc
     2221 cggcgtgaca ggccagcatt ctaaccagct gaactaccgc tccgcgctga aactttgcag
     2281 gcgcccagta tatccgaaga ctccctggaa acccagcccg atgaacactt ttttcaaagt
     2341 tttttcacag ggacttaaga attctgcaat ggcggagcgg acgggactcg aacccgcgac
     2401 ctccggcgtg acaggccagc attctaacca gctgaactac cgctccgttc ttgcaaaaac
     2461 cttttcgcct tcttcccgaa ccttccgggg agaagacaag gcccccggct tcagaccggg
     2521 ggcctcgatg taatggcgga gcggacggga ctcgaacccg cgacctccgg cgtgacaggc
     2581 cagcattcta accagctgaa ctaccgctcc gcgttgttac cgttttttgt tttccgccgg
     2641 cctggaccgg gaagaaaaca aagcctccag cttttggccg gaggcctcgt tgaatggcgg
     2701 agcggacggg actcgaaccc gcgacctccg gcgtgacagg ccagcattct aaccagctga
     2761 actaccgctc cacactcaaa cttttaccgc ggtgctgtgg tgggtgctga gggtttcgaa
     2821 cccccgaccc tctccgtgta aaggagacgc tctaccgctg agctaagcac cccagcgagc
     2881 cgcttagttt acagcatcct tcagggcctt gccagccttg aacgacggat tcttcgaagc
     2941 agcgatcttg atggtgtcgc cggtcttcgg gttgcggccg gtgcgggcag cacggtcgcg
     3001 gacctggaag gtaccgaagc caaccagggt gaccgcatcg ccgtccttca gcgccttggt
     3061 gacggcagca acgacggcat cgacagcgcg gctggactcg gccttggtca ggtcggcagc
     3121 ttcagcaacg gcatcgatca attcggtctt gttcattctc tacaactcct ttggcggtgg
     3181 gttccgcgga ttcgacaggg aagcaaccgc acgccttctg catgcggccg ccatgtggaa
     3241 acggttcgcc gattcagtga tcgctgacag cgatcactca ttcgcgagtg ctgcttttat
     3301 accagcggcc ctacccccac gcaagctgga aagccagtaa cgacgcgggt ttcgggccat
     3361 tggacagcgc gcgtcaatgc ttgacgcgcg cgtttccact cggtttggcc ttgctccgca
     3421 ccgtgacacg ttgcgcactc ttgcgcgcct tcttcggtgc caacggacgc tccagtgcca
     3481 ggtccagcac ttcttcgatg tacttcaccg gcacgatctt cagatcgcgg gtgacgttgg
     3541 ccgggatgtc agccaggtcc ttgcggttct cttccggaat gatgaccgtg cggatgccgc
     3601 cgcgcagcgc agccagcagc ttctccttca ggccaccaat ggcggtgaca cgaccgcgca
     3661 gggtgatctc gccggtcatc gccacgtcgg cacgcaccgg caccttggtc agcatcgaca
     3721 ccagcgaggt gaccatcgcc gcaccggcac tggggccgtc cttcggcgtg gcaccgtccg
     3781 gcacgtgcag gtgcacgtcg tgcttctgaa ggaagtcgct gtcgatgccg aagccgaccg
     3841 cgcgcgagcg caccaccgac aacgccgccg acgccgattc cttcatcacg ttgccgagct
     3901 gtccggtcag gatcagctgg cccttgcccg gcaccagcgt cgattcgatc tgcagcagat
     3961 cgccaccgac ttcggtccag gccaggccgg tgaccaggcc gatctcgttc tcttcctcgg
     4021 cacggccgaa gtcgaagcga cgcacgccca ggtacttgtc caggttcttg ctggatacgc
     4081 tcaccagcgc cttcttcttg gcacccttct ttgccttcac cggctgcggg ccggccagcg
     4141 cgatctcctt caccaccttg cggcagatct tggcgatctc gcgttccagg ttgcgcacgc
     4201 ccgattcacg cgtgtagtag cgcacgatgt cctggatggc atcgctgccg atctccagtt
     4261 cttccggctg caggccgttg gccttgatct gcttgggcac caggtagcgg gtggcgatgt
     4321 tgagcttctc atcctcggtg tagccgggga tgcggatcac ttccatgcgg tccagcagcg
     4381 ggcccgggat gttcagcgag ttcgaggtgg ccacgaacat cacttcggac aggtccaggt
     4441 ccacttccag gtagtggtcg ttgaacgcgt tgttctgctc cgggtcgagc acttccagca
     4501 gcgccgacga cgggtcgccg cggaaatcca tcgacatctt gtcgatctcg tcgagcacga
     4561 acagcgggtt cttgctgccg accttgttga ggttctgcac gatgcggccc ggcatcgaac
     4621 ccacataggt acggcgatgg ccacggatct cggcttcgtc gcggacgccg cccagcgaca
     4681 tgcgcacgaa cttgcggttg gtggccttgg cgatggactg gcccagcgag gtcttgccca
     4741 cgcccggcgg cccgaccagg cacaggatcg ggcccttcat ctgcttcacg cgcgactgca
     4801 ccgccaggta ttcaaggatg cgttccttga ccttctccag gccgtagtga tcggcatcga
     4861 gggtgtcctg cgcggccttc aggtccttgc gcaccttgct gcgcttcttc cacggcacgc
     4921 ccagcagcca ctccaggtag ttgcgcacga ccgccgcttc ggccgacatc ggcgacatct
     4981 gcttgagctt gttcagttcg ttgcgcgcct tggcttcaac ggccttcggc atgccggctt
     5041 cggcaatctt gcgggccagt tcttccagct cgcccggcgc gtcgtccagg tcacccagtt
     5101 ccttctggat ggccttcatc tgttcgttga ggtaatactc gcgctggctc ttctccatct
     5161 gcgacttcac gcggccgcgg atgcgcttct ccatctgctg cacgtcgatc tcgccatcga
     5221 ccaggccgac cagcatctcc aggcggtcac ccacggccag cgtttccagc aggcgctgct
     5281 tgtcggccag gcgcacgctg atgtgcgcgg cgatggtgtc ggccagacgc gccggctcgt
     5341 cgatgcccga cagcgtctgc agcagttccg gcggcagctt gcggttggtc ttcacgtact
     5401 gctcgaacag cgacatcagc gagcgggcga tcgcctcgac ctcgcgggct tcgcgctcgt
     5461 cggtggcatc gatctccacg gcctggccgt gcagcgagcc gttgcgctcg tcgacgtggg
     5521 tcacctgcac gcgcgacagg ccttcgacca gcaccttgat ggtgccgtcg ggcagcttca
     5581 gcagctgcag cacctgcgcc agcgtgccga cctggtagag gtcggccgca tgcggatcgt
     5641 cggtctcggc cgacttctgc gccagcagca ggatgcgctt gtccgattcc attgcctgtt
     5701 caagcgcgtg catggacttg tcacggccga cgaacagcgg gatgaccatg tgcgggaaca
     5761 ccactacgtc gcgcagcggc aggaccggca ggtcgagggt ttcacttggg gaacgggcca
     5821 tgggggctcc agggaagggg aaaaccgcct ccgggagggc atcttccgga gacaaaaaaa
     5881 gccgatggcc ccgttatggg gccatcggct ttcagatgca aggcattcct tgaaaatcct
     5941 ttccaatcaa caacctggaa ggatcactcg gcgcctgcgg ccttctgttc aggggccgct
     6001 ggggtctggt agatcaggta cggctcggac ttgtgctcga tcaccgactc gtccaccacc
     6061 accttgctga cgttttcctg cgacggcagg tcgtacatgg tgtccagcag aaccgattcg
     6121 acgatggtgc gcaggccgcg ggcgccggtc ttgcgcttga gcgccttcct ggcgatggcc
     6181 gacagcgcgt ccggacggaa ctccagctcg acgttctcca tctcgaacag cttcttgaac
     6241 tgcttggtga tggcgttctt cggctcggtc aggatcttga tcagggccgg ctcgtccagc
     6301 tcttccaggg tcgccaccac cggcaggcgg ccgacgaact cgggaatcag gccaaacttg
     6361 atcaggtctt ccggctcgac ttcggccagc accttgccca cttcctgctt gcgctcgctg
     6421 ctcttgacct tggcgccgaa gccgatgctg ccgacgtcgg tggagcgggc ctggatcact
     6481 ttgtccagcc cggcgaacgc gccgccgcag atgaacagga tgttcttggt gtccacctgc
     6541 aggaattcct gctgcggatg cttgcgcccg ccctgcggcg gaacgctggc cacggtgcct
     6601 tcgatcagct tcagcagggc ctgctgcacg ccttcgccgg acacatcgcg ggtgatcgac
     6661 gggttctcgc tcttgcgcga gatcttgtcg atctcatcga tgtagacgat gccctgctgc
     6721 gccttctcga cgtcgtagtc gcacttctgc agcagcttct ggatgatgtt ctccacgtcc
     6781 tcgcccacgt aaccggcttc ggtcagcgtg gtggcgtcgg ccatggtgaa cggcacgttg
     6841 agcaggcggg ccagggtctc ggccagcagc gtcttgcccg aaccggtcgg gccgaccagc
     6901 aggatgttcg acttcgccag ttcgacgtcg tcgttcttct gccggctctc gatgcgcttg
     6961 tagtggttgt acacggccac ggccagggtg cgcttggcac ggttctggcc gatcacgtac
     7021 tggtcgagaa cctcgaggat ctcgcgcggc ttgggcagcg aactgcgcgc cgactgcgcc
     7081 ttttcctcga gttcctcacg gatgatgtcg ttgcacagct ccacgcactc atcgcagatg
     7141 aatacgctcg gacccgcaat cagcttgcgc acttcatgct ggctcttgcc gcagaaagag
     7201 cagtagagga tcttgccggt gtccgtggaa cgaccttggc ggtcttcgct catgcttcgc
     7261 ttacccagtt accccacccg ctgaacgggg gttcgattcg agaatagcac agggccgagg
     7321 ggacaccagt cccgcccgac cctgcaggaa cggggcctgc cgggccccgt gaaggccggt
     7381 caaccggcct ggatcgactc atccggacga cgctccagga cctggtcgac cagaccatag
     7441 gcctgcgctt cgaaagcgct cttgaagttg tcgcgctcgg tgtcacgggc gatcgtctcc
     7501 agcgactggc cggtgtgctt ggccagcacc tcgttcaggc gcgaacgcag ggtcaggatc
     7561 tcacgcgcgt ggatgtcgat gtcggtggcc tggccctggt agccgcccag cggctggtgg
     7621 atcatcacgc gcgaattcgg cagcgcgtag cgcttgccgg cttcaccggc ggccagcagc
     7681 agggcgccca tcgaggccgc ctggccgatg caggtggtgc tcacattcgg cttgatgtac
     7741 tgcatggtgt cgtagatcgc catgccggcg gtgaccacgc cacccggcga gttgatgtag
     7801 atgttgatgt ccttttccgg gttttccgac tccaggaaca gcaactgcgc caccaccacg
     7861 ttggccatgt gatcgtcgat tgggcccacg aggaagatca ggcgctcctt caacaggcgc
     7921 gaatagatgt cgtaggcacg ctcgccgcgg ctggtctgct cgaccaccat cggaaccagg
     7981 ttcagggctt tggttcggtt gtccattacg tgaggtacct atcttggggg gaaacaaccc
     8041 cgcgccggca aaggcgcggg gcattcggtg atccgcccgg gcttactggc ggatcgcgtc
     8101 ctggaacgac agcttttctt cggtgtgctg ggcacgctcg gcgatccagt cgatcacctg
     8161 ctcttccatc acgcggttct gcaggccaga catcagctgg gggtcgttgc ggtacatctc
     8221 aatgacctgc tccggctctt cgtaggtcga agcgatcagg cgcatcgttt cgttcaggcg
     8281 cttggcttcc aggcgcaggt cgttggtacg ggccacttca ccgaccagca ggccgaccag
     8341 cacgcgcttg gcggcagcgt ccttgaagcc ttcatgggca tcggccggga tctcaccgac
     8401 gttctggccg ttgcggcgga tctgctccac ctgctgggcc agcatggcgc gggcttcgtt
     8461 ctcgaccagg cgcggcggca tttccaccga agcgtaggcg gcgatcagct gctcgcccac
     8521 ttcgcgacgc aggcggttca tcagggcgcc cttcagctcg cgctccaggt tggcgcggat
     8581 gtcgctgcgg aactgctcga cgtcgccgcc cttcacgcca aagctcttga tgaaggcttc
     8641 gtcgaccgcc ggcacgaccg gctcggacac ttcggcaacc ttgacggtga cctgcacggt
     8701 cttgccggcc agcaccggca cgcgccagtc agccgggaac tcgacgtcca gggtcttctc
     8761 ttcacccttg gccaggccga ccaggccctt ctcgatggtg tcgaacatca tgccctggcc
     8821 gagcacgatc gaacccttct cggtgccttc ggccggcagg cgctcttcgc cggcctgcga
     8881 ccaggtttcc actgcgacca ggtcgccgtc ctgcgcgcca cggctgaccg gggcccaggt
     8941 acgacgctgg ttctgcaggt tctcgatcat ctggtcgatg tcggcgtcgg tgatttcggc
     9001 gctgtggcgc acgacggtca gcttgctgac gtcgatgtcg ccgaagtccg gcaccacttc
     9061 cacggtggcc acgaacgaga actcaccctc gtcgcccttg tcgatgcgcg ggctgccgac
     9121 gatgcgcagg tcgtgctcac gcacggcggc atcgaaggtt tcgcgcagca ggccgtccag
     9181 cgcttcgcca cggacctgcg cgccgaagcg ctgctcgatc accttggccg gcaccttgcc
     9241 cggacggaaa cccttgatgc gggtggtgcg ggcgatttcg cccaggcggc cgacgatgtg
     9301 gctctgcaga cggtcttccg gcagcgagaa gctcaggcgg cgttccaggt tgccggtgga
     9361 ttcgatcgaa gcttgcatgt tgactcctgc caccggtggc ccaggccccc ggctcgatga
     9421 ttgggatgaa acggttgtaa ggacacggcg tctgggacgc gcctgcttgc cgcagccctt
     9481 tagtttcgcc caattcggcc tgcactgcca gcgcgtgccg ggtcaagggg cgcagagggc
     9541 ccgatcaggg cggggacagg ccggcactgg tgcgaaaggg gggactcgaa cccccacgcc
     9601 ttgcggcact ggaacctaaa tccagggcgt ctaccaattc cgccactttc gcgtggccgg
     9661 cacaggcgtt cattgtcgca ggcaggggcg ggaagcggaa gtcctgcaca aaactgaaca
     9721 cggccgtccc ggcgagcaac ggccctccgg gacggcgctg gttcagtgcg gcggttcggt
     9781 tcgggcgggc gccgttgcgg cgccctgccc ggctgctgga tccgcttcgc ggacctccac
     9841 gcccccctcg tcagcacggc gcagctccac cacatcaggg gcggcgccac cctccggcga
     9901 taccggccgt gccggaacag cctccacgtt ggcatcgcgc tcgacggtct gcgccggatc
     9961 actgccgggc gcgcaggcca ccagtgccac cagtgccacc agcgcgacgg gaaccctcgc
    10021 catcgtgcgc agtcgattga tatcggccat caacatcttc cttcgtgcat gcgccatcgg
    10081 cgcggaagat ccattgggtt cgatggagaa cgcgatgcgg tgagaagcag cgcacagcat
    10141 tgaaaacact gatgacgcat atgccactga tttcagcacc gcttcagcag atccacgcca
    10201 tgcgtgggtg aagcgcaacc cggcgtacgg acaagaaaaa agccacttgg cgaaccaagt
    10261 ggctttcgtc tggtgggctg tcaaggattc gaaccttgga cctattgatt aagagtcaac
    10321 tgctctacca actgagctaa cagcccgaaa tcggggcgcg aattatgacc cgatccgctc
    10381 ggtgggtgca agcgcttttt tcaacatcgt tgaaaccagc accacatcca gctgcctctg
    10441 cagaacggca ccaggccgga ctccgcaggg cgtgatccat cgcaacgaag gagtcacact
    10501 aataagaaaa aagccacctg gcgtaccagg tggcttccgt cttggtgggc cgtcaaggat
    10561 tcgaaccttg gacctattga ttaagagtca actgctctac caactgagct aacggcccgt
    10621 gaaactcaga cgcacattgt agcgtgcttt ctgtttattg caataccgtt tcggctgcgc
    10681 cgatgcggtt gaatcagtgg ggtggctgag gggattcgaa cccccgacca ccggaatcac
    10741 aatccggtac tctaaccaac tgagctacag ccaccactga aacttttgct ccctcgccga
    10801 taccactgac gctggaactc aaacctttgc ctggagactg tcaccgaagt tccggtccgc
    10861 cgaagcgagt ccgatattct ggtggagtct gtgggctttt gcaagcactt cttcacatct
    10921 gccgatacga ccccggtgcc tcgccaatgg cgcgcccgac aggaatcgaa cctgtaaccg
    10981 ccggcttaga aggccggtgc tctatccagt tgagctacgg gcgcccgaac cggaacgatg
    11041 tccaatccga cgtggcgtgg gattggtcgg ggtagaggga ttcgaacccc cgacatcctg
    11101 ctcccaaagc aggcgcgcta ccagactgcg ctataccccg gtcttgcaat cccctcgggc
    11161 caggcccggg gagtcgttca ttgtcgccaa gcgcatcgcg aactgtcaac gcaggcgcga
    11221 ccgatcatga acccgccacg gcgccctgca tgtccatcgg ctatgctcgc ggacatcggc
    11281 cggatggccg tcccgaccct cattcgcacg gagaacacgc atgcgcagcg gcaacccggc
    11341 tctttccgag tcgaccttcc tcgacctcgc cagcggctcg gtggtgacca gccccggcca
    11401 ggtgatgacc ctcaacggca ccgccaacaa gaccggcatc ctgctgctgc tggccgtgct
    11461 gaccgcagcc tttgcctgga accagtccgt caatgagtac ggcgaggtca tgggcgcagc
    11521 caagctgtat gccatgggcg gcgcgatcgg cgggctggtg ctggcgctga tcaccatctt
    11581 caagaaggaa tggtcgccgg tcaccgcacc gatgtacgcg ctggtcgagg gcctgttcct
    11641 gggcgccgtc tcggcgctgt tcaacatgaa gtacccgggc atcgtgttcc aggccgtgct
    11701 gctgaccttc ggcacgctgg ccgcgctgct gttcgcgtac cgcagcggcg tgatcaaggc
    11761 caccgagaac ttcaagatgg gcgtggtggc tgccaccggc ggcatcgccc tgctctacct
    11821 ggcctcgttc gtactgggct tcttcaacat caacgtcccg gtgatccacg actccagctg
    11881 gctgggcatc gccttcagcc tgttcgtggt ggtggtcgca gcactgaacc tggtgctgga
    11941 cttcgacttc atcgagacgg gcgtggccca gcgcgcgccg aagtacatgg agtggtatgg
    12001 cgcattcggc ctgatggtga ccctggtctg gctgtacatc gaattcctgc gcctgctgtc
    12061 gaagatccag cagcgctgag ccacgccatg ccgtaaacga caaagggcgc ccgggtggcg
    12121 cccttttcct ttgacgcatc agcgcgccag cagcgccgga agcgatgagg ccagcagcgc
    12181 gatgcccgac gcggtcagca gactcagcac gagctggcgg aagcgcgcct cgctgatgcc
    12241 gatgtagacc cgcgcaccga gcagggccgg caccagcatg gccggcgcca cgatggcgaa
    12301 atacggcagc atctgccggt tcaccaggcc actgccgaca taggtggcca tggtcaccgc
    12361 cagcatcgcc aggttgaagt tctggatgac cgcgcgctgc tcatccttgc cgaaaccacg
    12421 cagcgtgctc cacaacgtcg gcacgggccc ggcgaatcca ccgatgccgc tgagcacacc
    12481 accggccatg ccggcgatcg cgtcacccag gcggccgccc gcgcggatcg gcggcaacga
    12541 ccgcgccatc agcatcaccg ggcaccacag cgccaggaag ccccccagca gcgccttgaa
    12601 ccactccatg tccagctgtg gcagcaccat cacgcccagc gggatgcccg ccagaccgcc
    12661 cagcacgaat ggcagcagca gacgcaggtt gaatccgcgg cgcacggtga acaccgcgac
    12721 cagctggccg accagcgcgc cgaataccga cagcgtcgcc gccagtcgcg gctccagccc
    12781 ccacgcccag aacgacatcg ccaccatgcc gaacgcgaaa cccgacaggc cctgcacgaa
    12841 tccggcgacg atcgcgccga gcgcgaccag cagatagacc gactccatca ccacctcggt
    12901 tgcggttgca cggctaccca gccgcgccac tctgcgcagc gtagtgcgct gcgagatgct
    12961 cgaccagcgc acgcaccttc ggcgccagtg cacgcgcatg cggatacagc gcgaagtagc
    13021 ggcgctgtcc ggcgtgccag gccggcagca cccggatcaa acgaccggcg cgcaggtcct
    13081 cctgtacggt cagcgcagtg aacagactga tgcccatgcc gcccagcgcg gcggcgtaca
    13141 gcgccggcgt ggcatccacg cgcaggcgct gcccggcctc gatgctcgcg gtggcaccgc
    13201 gcggcccgtg cagttgccag ggcggcaacg ccggtgtggg actgaaaccc agcaacaggt
    13261 gctgcgcgag atccgacgcc tgccgaggca gtccgtggcg cgccagatag ccaggcgcgg
    13321 ccaccaggat gcgcgggcag ctggccaact cgcgtgcaac cagctggctg tccggcaatg
    13381 acggtgcgat acgcagcgca agatcgaaac caccgcccac cacatcgacc agctgatcat
    13441 cggcggaaag atccagcgcc acctgcgggt agcgctgcag gaacgacggc agccaatgcg
    13501 gcagctcctg gctggccacc acctgcggca cgctgatccg cacgatgcca ctgggctgcg
    13561 cctgcccggc acgcacgcga tcatctgctt cctgcaggcg atccagcagc gctcccgcct
    13621 cgcggtagta gtcgcgaccg gcttcggtca gtgacagccg gcggctgttg cggtccagca
    13681 ggcgtacctg caggtgttct tccagctgcc gcagttgccg cgacatggcc gaatgggtcg
    13741 tccccaatcg ctcggcggca gcggtgaagc tgcccgcatc gacgatggca cgcagcgcgc
    13801 gcagggcggc gaattgatcc atcagcgggc ggctccggtt ggcaggaccc gcgatgtgcg
    13861 ggccctgcca gcttatcaag cgccgccgcc ggccttgcgc accggcagcg ccaggatcgc
    13921 gtcagtggtc atgacatcgc cgaatgtgtc ctcgatctgg gccagcgcgg cctcgtgcag
    13981 cgcgcgatgg ccgatgtgct ggccaccggc caggtccagg tcgcggctgg ccgttgcatc
    14041 ggacgacacg atcacccggt agccacgcgg tgccgcggcg gcatcgcggg cggcgccggc
    14101 cacgcaggca tgggtctgca ggccggtgac gatcagggtg tcgatgcccg cctgcttcag
    14161 cacggtgtcg atcactgccg cagagccgcc agcgaacacg ctgacgttgt ccttctgcac
    14221 cacggtctcg ccggcccgcg gctgcatgtc gcgatggaag gcggcattgg cactgccctg
    14281 cgcgaacagc ggcgcacctg ctggcagcac atgctgcacg tggatgacgc ggatgccatt
    14341 ggcatcggcg aagtcgatca ggcggcgggt ctggcgcagc gcggccacgc catcggggat
    14401 gaccatgcgg ccaccggcaa agccaggcgc ggcctttgca tcgaagtact cgttctggaa
    14461 atcgatcacc agcacggcgg tcttggccgc atccagcgaa gcggggaccg gggcgccagc
    14521 catgtggcgg atggtgggat gggccggctc ggcggcgacg accggggcgg tggcggccat
    14581 gccgatcagg ctggccaggc caaaggcggt gaggttcatc ggacgactcc tgtgcggtgg
    14641 aaagtgggca caggatgcgg agcggatggc gcacgaacca gcagtgaagc agcacacgat
    14701 ctgtgcagat agcgcacaga ccgatagtgt agtgtcgagc catgctcgac tgctcttcgc
    14761 gtgagcccca taagaaagca aaagccgtcg agcatggctc gacgctacag aagcgcagaa
    14821 acgcaacggg gcgcccgaag gcgccccgct gtgggtccaa ccgaggctgg ccgaccgctt
    14881 acaggcggct ggcgatggcc tgggcgaagc tcatggtggt accggtgcca cccaggtcgc
    14941 cggtcagcga gtccttggct tccatggtgg ccacgatggc cttgcgcagg cgctcggcat
    15001 tttccggctg gccgacgtgg tccagcatct gcgcggctgc cagcagcagc gcgcacggat
    15061 tggccttgcc ctggccggcg atgtccggcg cggtgccgtg cacggcttcg aagatcgccg
    15121 cgtccttgcc gatgttggca cccggggcca ggcccaggcc accaaccaga ccggcacaca
    15181 ggtcggagat gatgtcgccg aacaggttgg tggtgacgat cacgtcgaac tgttccggac
    15241 gcatcaccag ctgcatgcag cagttgtcga cgatcatttc ctggaactcg atctccgggt
    15301 actgcgcggc cacttcgcgg gcgacgttca ggaacaggcc cgaggtcgac ttgatgatgt
    15361 tggccttgtg cacggcggtg accttcttgc ggccggtgct cttggccagc tcgaaggcgt
    15421 agcgcacgat gcgctcggag cccttgcggg tgatgcgggt gccggagaag gcggtctcgc
    15481 catcggccga cacttcctgg ccttcggcca ggtacgcacc ttcggtattc tcgcgaacgg
    15541 tgatcaggtc aacgttgtcg aaacgcgact tggtgttcgg gaaggtgtgc gccggacgca
    15601 cgttggcgta caggtcgaag tggcggcgca ggctgacgtt gatcgaggtg aagccaccac
    15661 cgaccggggt ggtcagcggg ctcttcagcg ccaccttgtt gcgcgcgatc gattccaggg
    15721 tcaccgccgg catcaggtcg ccgtgctttt ccagggccac caggccggcg tcggcgtctt
    15781 cgtactccag gccagtcttg agctggtcga gcacgaacag ggtggcgtcc atgatttccg
    15841 ggccaatgcc gtcgccgcgg atgaccgtaa ttttctgcgt cattgatcga tgttccgaac
    15901 agggggaaaa acgccgtccg gacgtgcccg gaaacgccgg cgcaaaggaa gtttcaccgg
    15961 caattatgcc ttagccgggc ccggctaccc aagtagacca tggtcctgac cccggcaaag
    16021 gcataattgc ccgcgcattc ttcctctacc cccgcctgtc ggcgcgcccc ttcaacaaga
    16081 aggggctcct tggctgctgg atcgcggggg aggccccgcg cgcgct
//
LOCUS       DAOKIP010000082        15998 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.082,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000082 DAOKIP010000000
VERSION     DAOKIP010000082.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 15998)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15998)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15998
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.082"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(30..1025)
                     /gene="dusB"
                     /locus_tag="QEL58_002171"
     CDS             complement(30..1025)
                     /gene="dusB"
                     /locus_tag="QEL58_002171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011050554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine synthase DusB"
                     /protein_id="HDS1676632.1"
                     /translation="MQIGPYTIAPNVVLAPMAGVTDKPFRLLCKRLGAGLAASEMTIS
                     DPRFWNTRKSIHRMDHDGEPAPISVQIAGTEPQQLAEAARYNVDHGAQIIDINMGCPA
                     KKVCNAWAGSALMRDEQLVARILEAVVNAVDVPVTLKIRTGWDCDHRNGPLIARIAED
                     SGIAALAVHGRTRDQHYTGQAEYGTIGEIKAALRIPVIANGDIDSPQKAALVLKQTGV
                     DAVMIGRSAQGRPWIFREVAHYLATGEELPPPSLAEVRDILLGHLHALHAFYGEPQGV
                     RIARKHLGWYAKDRPENAAFRAVVNRAEDPQSQIALTTEYFDRLIAGEPAMPSAA"
     gene            complement(1173..1604)
                     /locus_tag="QEL58_002172"
     CDS             complement(1173..1604)
                     /locus_tag="QEL58_002172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005415320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676633.1"
                     /translation="MDGFPWLLAAAAGSAIAALLHIGCIAFGAPWYRCFGAGPRMVRL
                     AQAGHWWPPLMTAGITAVLVGWTLYALAGAGWHSPLPASRWVLPAIAAVLLLRAAMGF
                     GLALFRPGYNGARFWAISSLVCLGLGLAFAVGTRQAWQSLG"
     gene            complement(1785..2750)
                     /locus_tag="QEL58_002173"
     CDS             complement(1785..2750)
                     /locus_tag="QEL58_002173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribokinase"
                     /protein_id="HDS1676634.1"
                     /translation="MSSSVVVVGSFNVDHVWRCESLPAPGATIAGRYSTGPGGKGFNQ
                     AVAACRAGADTHFVCALGDDAGGATARELAAHDGFGLIAEASSEPTGTAGIYVDARGR
                     NTIVIGPGANAALSTDFLHQQQALLTGAKVVLVQLESPVPTIEAALATAREAGVTTVL
                     NTAPADAPSTIGLLKLADVITPNETEFAALLGRHVGERVDANDVAALDGASLHALCRK
                     LVGNGTVVVTLGSVGVFVSHAEENLRGDTQPYYRVGAEQVQAIDTTGAGDAFNGALAA
                     SLAQVADAPFARHVRFANQFAGRSTEKEGAAAAMPRFTPADAEVK"
     gene            complement(2776..4074)
                     /locus_tag="QEL58_002174"
     CDS             complement(2776..4074)
                     /locus_tag="QEL58_002174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NupC/NupG family nucleoside CNT transporter"
                     /protein_id="HDS1676635.1"
                     /translation="MVEGLGRIGFGLFGLAVLIGITWLFSNNKRAVDWKLVATGITLQ
                     IAFAALVILVPGGRDVFDALGHGFVKVLSFVNEGSGFIFGSLMDTKNYGFIFAFQVLP
                     TIIFFSALMGVMYHLNIMQAIVRVMAWAITKVMRVSGAETTSVCASVFIGQTEAPLTV
                     RPYIAKMTQSELLTMMIGGMAHIAGGVLAAYVGMLGGGDPVQQAFYAKHLLAASIMAA
                     PATLVVAKLLIPETGTPLTRGTVKMEVEKTSSNIIDAAAAGAGDGLKLALNIGAMLLA
                     FIALIALLNAPLTWLGDVTGLAAAIGKPTNLSTIFGYVLAPIAWVIGTPWADATTVGS
                     LIGQKVVINEFVAYTELSQIVNGQVAGVSLSDEGRLIATYALCGFANFSSIAIQIGGI
                     GGLAPERRHDLAKFGLRAVLGGTIATFMTATIAGVLTHFS"
     gene            4268..5239
                     /locus_tag="QEL58_002175"
     CDS             4268..5239
                     /locus_tag="QEL58_002175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005408116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HDS1676636.1"
                     /translation="MQYRRLGSTGLPISALSFGAWVTFGDQIPRDEARNLVAAAWDHG
                     VNFFDNAEGYANGRAEQVMGDVISDLRLPRDGFCVSSKVFFGSAKDPRPTQRGLSRKH
                     VTDACHAALKRLRVEYLDLYYCHRPDPDAPIAETVHAMDTLVRQGKILYWGTSEWSAA
                     QIQQALDIAEAHNLQGPSMEQPQYNLLHRERVELEYAPLYARAGLGTTIFSPLASGLL
                     TGKYDQGIPADARLGRPGMEWLQDMVLGADAEARLGQVRRFSEVARALGQSPATLAIA
                     WCLRNPNVSSVILGASRVSQLLQNLQALEVLEQVDAAGWAQVEAVFA"
     gene            5457..5651
                     /locus_tag="QEL58_002176"
     CDS             5457..5651
                     /locus_tag="QEL58_002176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017115614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemin uptake protein HemP"
                     /protein_id="HDS1676637.1"
                     /translation="MNAQPVLLRPETLTLRDRPVRVVPPEEVIDSEALLKGRREILIQ
                     HGDRFYRLRHTSNDKLILTK"
     gene            5841..7997
                     /locus_tag="QEL58_002177"
     CDS             5841..7997
                     /locus_tag="QEL58_002177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005408117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent
                     hemoglobin/transferrin/lactoferrin family receptor"
                     /protein_id="HDS1676638.1"
                     /translation="MALPLSAHAAAAATAAPDAREFDRVQVTATRTERAVSDVAATVD
                     VIDREQMDRHLVQDIKDLLRYEPGLSVNRSAARFGLGSIRIRGLDGNRVRVQTDGIAM
                     PTSFNIGSFSNANRNFTDLDTLKRVEIVRGPASSLYGSDALGGVVAFVTKDPADYLKD
                     GKDSYVGLKFGYDGEWKGLLGGVTTAFGGEHWSGMVNINHRQGQETVNKGDVRSLDNT
                     RTAPNPQDRDGRSGLAKLVYAPSEDQRFRLTVEGNEDKTETNVLSSIDRTTTTGMKAR
                     DKQNRTRVSFAHEMDALDKGFADSLHWQVYSQNSETTQVTDEDRANRSRRHREFTFDQ
                     RVYGLQAQFNKAFSTGSVEHALTYGFEGARTEIRQKRDGFQVLANGQTSTTILPDAFP
                     VRDFPISKTTELGLYAQDEMRMAGGKLSLVPGVRVDRYELKPEVDNIFAEDNPGVPVA
                     KLTKTSVSPKLGMVYRFTDEWSLFAGYSHGFRSPPYNDVNLGFTNFAFGYTAIPNPDL
                     KPETSDGMELGLRFLSPAAYVSVSGYYNEYKDFIESQSLVGTNAQGLMVFQSRNIADA
                     RIYGAELKAGVDFGQISPALQGWALRSAVAWSRGDNKTEDTPLDSVDPLRGTVGLMYD
                     TETWGVELAGTFVKRKDRLASTTAYRPAGYGVTDLMAHWNFAPGATFNVGVFNLADKR
                     YIDWSNVGSTLLPTSRVLDRYTSPGRTFSASLAVSW"
     gene            8002..8601
                     /locus_tag="QEL58_002178"
     CDS             8002..8601
                     /locus_tag="QEL58_002178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hemin transport protein"
                     /protein_id="HDS1676639.1"
                     /translation="MSRALSARRNDSIAAPNGAAWPTPAQLATLGTVLCLYHADGNEL
                     GGWRQAVRVHACQGVDSEGLRESLCFLDGRGRCVWRLYLLPDSDFLAWDRLVAALPPG
                     PQHDSDGSVGERLWRRLAGHLGGQRWRLCALRLHAADDGRTLAASLSTLSSLGAATAR
                     RIARLEGAEGELAIDDCCCADAARRPAPRIPGDLPLIRL"
     gene            8670..9605
                     /locus_tag="QEL58_002179"
     CDS             8670..9605
                     /locus_tag="QEL58_002179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676640.1"
                     /translation="MKFQTASALLLLAASGVASAQPSDIARDHDSILAMQGEYTVDFA
                     FDETVLLKPGYERAPAMRSGGNEVVIVVEDTPKRIVLQHLLLDEKSGHITKHWRQDWV
                     YEAPNRFEFNADQTWQVRTIPAATNQGAWTQCVYEVSDAPRYCGTGKWTYSNNVPSWT
                     SDLSWRPLPRREYTKRSDYNALAVINRHTLTPNGWTHEQFNTKVQRNADGSQVEIARE
                     FGFNDYVKTTEIDFTPARNYWKATAGYWAKVRQRWDGFLGQAPGVHLKTKIDGMAMII
                     PLFTQAEEIQAGKKVKDKQIDEVFAKYVEKAPKEG"
     gene            complement(9778..12294)
                     /locus_tag="QEL58_002180"
     CDS             complement(9778..12294)
                     /locus_tag="QEL58_002180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005412282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HDS1676641.1"
                     /translation="MNLLRHAWRALRREALAGDLLTVFAALVLGVAVMTAVGTLVNRV
                     NLALTGSAAEMLGGDLGIAGRDDPPQAFAEEAQRRGLAYTRIASFGSVLFHGEASQMA
                     SIKAVQAGYPLRGALRVRATPGGALIADAGMPAKGQAYADPRLLQGLGLKAGDDLEFG
                     AGTLRIAGIIEAEPDAGGDLLTLSPTLLVNRADVEGTGLLGPGSRINYRLMFAGAADQ
                     VAGLRQWLLPQVKGLRLLSVDDTQRGVRQAFDLAGRFLGLSALLAVLLAGVATALAAN
                     RFALRRIDQVAILRCLGARQRDILFGLALQLLMLAVPACALGIGLGMAAQEGLVQVLG
                     SLVPQRLPLPEAMPALTGAGIGLLLLFGFGLPPLLRLRGVPPMRVLNRSFAALPPASL
                     LAYVAALAASLLLAVQVTGDLKLALWVLGGLAALAVAAGVVGFVLLQLLRGLQHRLHG
                     NWRLGLAALTRRRMLAVMQLVGLSLSLCALLLLAVTGPGLLQQWRERLPADTPNYFLI
                     NIQPEQRDSVLAALRGLGANDASIEPMATGRLIAINGKPPLRVDRTPEQNGQPASGEA
                     QRDDDDENRPLNFSWRNSFPPANTLVDGTFWKADSTAPEASVEIGWAKRYGVASGDRI
                     SIAVGEQEREFTVTSVRKADWNTFRPNFFVLLNPNAVGDTPHNLLSAFHLPAGKAAGL
                     GELVRAQPNLSLLDVDAVISQVRDVMERVAQAVQLVMVFSLLAGVLVLLAALQATAGE
                     RRYDSAVLRTLGATRRQLRGAVLVEFGALGTLAALLAVGAAAAIGVAVSQKVFELPLL
                     PPWPGLLLGGVVGIGLSLLAGWWGTRRILHAPPALALREA"
     gene            complement(12291..12938)
                     /locus_tag="QEL58_002181"
     CDS             complement(12291..12938)
                     /locus_tag="QEL58_002181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HDS1676642.1"
                     /translation="MQGPEGEVHILDNITLTVHEGTSVAIVGASGSGKTTLLGLLAGL
                     DLPSRGSIALAGQDLGRLDEEARAQLRAREVGFVFQSFHLLPALTAAENVALPLELAG
                     REDRVRVDEVLAQVGLGHRARHYPRQLSGGEQQRVALARAFVTRPRILFADEPTGSLD
                     HATGQHISDLLFELNAGSGTTLVLVTHDLRLAQRCQYIHRIDDGRLLPVERGAAA"
     gene            13014..13658
                     /locus_tag="QEL58_002182"
     CDS             13014..13658
                     /locus_tag="QEL58_002182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arylesterase"
                     /protein_id="HDS1676643.1"
                     /translation="MRKTGWSRRAGAMMVLLLGFLLLPGLACAKGPAGTVLVLGDSLS
                     AAHNIPADAGWVSLLQQRVRQQSKTPARIVNASMSGETTAGALTRLPGLLAKEKPTVV
                     VIALGGNDALRGLTPAQVQGNLEKMVQASQKAGARVLLLGIDVPPNYGPAYRQRLAAA
                     YKALATQYKLPLLPFLLEGVALQPGMMQADGLHPTAQAQPKVLDNVWPLLRPLL"
     gene            13746..14459
                     /locus_tag="QEL58_002183"
     CDS             13746..14459
                     /locus_tag="QEL58_002183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDS1676644.1"
                     /translation="MRQTKETSGLVLVVEDNRNISEMIGEYLEGRGFEVDYAQDGLDG
                     YRLAAENSYDVVVLDLMLPRLDGIEVCRRLRNDARKSTPVLMLTARDTLDDKLTGLGF
                     GADDYLTKPFAIQELEARLRALIRRERRQVGSEVLKVADLVLDPVSMRATRAGTELQL
                     SPIGLRLLTILMRESPRVVTRQEIEREIWGNGLPDSDTLRSHLYNLRKIIDKPFDRPL
                     LHTVQSAGYRIADIAQPMA"
     gene            14616..15887
                     /locus_tag="QEL58_002184"
     CDS             14616..15887
                     /locus_tag="QEL58_002184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing histidine kinase"
                     /protein_id="HDS1676645.1"
                     /translation="MPHGLPRKIRIAFILQAVLASLGILLGAWLVSLVIKHSLVGAAL
                     REEAAYYWTLHEASPVQPPPNTQNIRGYLLESGQSALSLPANLRNLEPGFHELPKDDQ
                     LVLVDVRPAGRLYLVFLRSRAEMLAFWFGIVPVLLTLLAVYGASWVTYRASKRLVSPV
                     NWLARRVSRWDPGHPEAADLEPNKLPADMQGETRQLAAALHSLANRVSAHVARERNFT
                     RDASHELRTPLTVIRVASDMALGDETLQPRLRRSLQRIQRAGRDMEAVIDAFLILARE
                     ADVEPQIELFDVNDIVRYEVDNANELLGTRPVAVHLHSDGPVQLHAPPRVLQVVVSNL
                     VRNACSYTDEGRIDVHVLNDRVVVRDTGIGMSAEALSRAFEPFYRAEPSRPQGTGLGL
                     SIVRRLCDRFGWKVSLASEPGQGTEATVIFR"
BASE COUNT         2692 a         5497 c         5412 g         2397 t
ORIGIN      
        1 gcgggcaggt tacgaggcgg ctggcgcagt caggcggcgg aaggcatcgc cggttccccg
       61 gcgatcaggc gatcgaagta ctcggtggtc agcgcgatct ggctctgcgg gtcttcggcg
      121 cggttgacca ccgcgcggaa ggcagcattc tctggccggt ccttggcata ccagcccagg
      181 tgcttgcgcg cgatgcgcac gccctgcggt tcgccataga acgcatgcag cgcatgcagg
      241 tggccgagca ggatgtcgcg cacctcggcc agcgacggcg gcggcagttc ctcgccggtg
      301 gccaggtaat gcgccacctc gcggaagatc cacggccggc cctgcgcgga gcggccgatc
      361 atcaccgcat ccacgccggt ctgcttcagc accaaggcgg ccttctgcgg cgaatcgata
      421 tcgccgttgg cgatcaccgg gatgcgcagc gcggccttga tctcgccgat ggtgccgtac
      481 tcggcctggc cggtgtaatg ctggtcgcgg gtgcggccat gcacggccag cgcggcgatg
      541 ccgctgtcct cggcaatgcg cgcgatcagc gggccattgc ggtggtcgca gtcccagccg
      601 gtgcggatct tcagcgtgac cggcacgtcc accgcgttga ccaccgcttc gaggatgcgc
      661 gccaccagct gctcgtcgcg catcagcgcc gagccggccc aggcattgca caccttcttg
      721 gccgggcaac ccatgttgat gtcgatgatc tgcgcgccgt ggtcgacgtt gtagcgcgca
      781 gcctcggcca gctgctgcgg ctcggtgccg gcgatctgca cgctgatcgg tgccggttcg
      841 ccgtcatggt ccatgcggtg gatcgacttg cgcgtgttcc agaagcgcgg gtcgctgatg
      901 gtcatttccg aggcggccag gcccgcgccc agccgtttgc acagcaggcg gaagggcttg
      961 tcggtgacgc cggccatggg cgccagcacg acgttggggg caatggtgta cgggccgatc
     1021 tgcatgcgcc cattgtaggg cgcgggcggc ggtacggccg tgtcgggcgc ggtccggttc
     1081 aggccgatcg gcaccgacct catgccgtac cggcatcagc agatgcttga cggttgcttc
     1141 cgtcgccccc aggggcgggt gatcgtagcc ggctaaccca ggctctgcca ggcctgccga
     1201 gtacccacgg cgaaggccag ccccagaccc aggcagacca gcgagctgat cgcccagaag
     1261 cgcgcgccgt tgtagccggg gcggaacagc gccaggccga agcccatcgc cgcgcgcagc
     1321 agcaacactg cagcgatggc gggcagcacc cagcggctgg ccggcagtgg cgagtgccag
     1381 ccggcgccgg ccagcgcata cagggtccag cccaccagca cggcggtgat gccggcagtc
     1441 atcagcggcg gccaccagtg cccggcctgc gccagccgga ccatgcgtgg gccagcaccg
     1501 aagcatctgt accagggagc gccgaaggcg atgcagccga tatgcaacag ggccgcaatg
     1561 gcactaccgg cggcggcagc cagcaaccag gggaatccgt ccatgtcctg cccgagcaag
     1621 gaagctgcgc ggatggtggg cgaggggcgc tgcacgggca atgcgacagg tggccgcagg
     1681 gggccgcgga tcggccggcg accacgccgc gccgcgatgg gtggccaaca aaaaagcccg
     1741 ggcatctgca tgcccgggct cgttcatcca cgcagggcgt ggatctactt cacttctgcg
     1801 tcggccgggg tgaagcgcgg catcgctgca gcggcgcctt ccttttcggt ggaacggcca
     1861 gcgaactggt tggcgaagcg cacatggcgc gcgaacgggg catcggccac ctgcgccagc
     1921 gacgcggcca gcgcaccgtt gaaggcatcg ccggcaccgg tggtgtcgat cgcctgcacc
     1981 tgttcggcac ccacgcggta gtacggctgg gtatcgccgc gcaggttttc ttcggcatgc
     2041 gagacgaaca cgcccaccga acccagggtc accaccaccg taccgttgcc gaccagcttg
     2101 cggcacagcg cgtgcaggct ggcaccgtcc agcgcggcaa cgtcgttggc gtccacgcgc
     2161 tcaccgacgt ggcggccgag cagggcggcg aactcggtct cgttcggggt gatcacatcg
     2221 gccagcttga gcaggccgat ggtcgagggg gcatcggccg gcgcggtgtt gagcacggtg
     2281 gtgacaccgg cctcgcgcgc ggtggccagc gccgcttcga tggtcggcac cggcgattcc
     2341 agctgcacca gcaccacctt ggcgccggtc agcagcgcct gctgctggtg caggaagtcg
     2401 gtgctgagcg cggcattggc gcccgggccg atcacgatgg tgttgcggcc gcgggcgtcg
     2461 acgtagatgc ccgcggtgcc ggtcggctcg ctgctggctt cggcgatcag cccgaagcca
     2521 tcgtgcgcgg ccagttcgcg tgccgtggcg ccaccggcgt catcgcccag cgcgcacacg
     2581 aagtgcgtgt cggcgccggc gcggcaggcc gccacggcct ggttgaagcc cttgccaccg
     2641 gggccggtgc tgtagcggcc ggcaatggtc gcacccggtg ccggcagcga ctcgcaccgc
     2701 cacacgtgat cgacattgaa ggaaccgacg acaacgacac tgctgctcat agggaatctt
     2761 ttctcaacca agggttcaac tgaagtgcgt cagcacgccg gcgatggtcg ccgtcatgaa
     2821 ggtggcaatg gtaccgccca gcaccgcgcg caggccgaac ttggccaggt cgtggcgacg
     2881 ttccggggcc aggccaccga tgccgccgat ctggatcgcg atcgagctga agttggcgaa
     2941 gccgcacagc gcgtaggtgg cgatcaggcg gccctcgtcg gacaggctca cgccggccac
     3001 ctggccgttc acgatctgcg acagctcggt gtaggcgacg aattcgttga tcacgacctt
     3061 ctggccgatc agcgaaccga cggtggtggc atcggcccac ggcgtgccga tcacccaggc
     3121 gatcggggcc agcacgtaac cgaagatggt cgacaggttg gtcggcttgc cgatcgcggc
     3181 cgccaggccg gtcacatcgc cgagccaggt cagcggggcg ttcagcagtg cgatcagggc
     3241 gatgaaggcc agcagcatcg cgccgatgtt cagcgccagc ttcaggccgt caccggcgcc
     3301 ggccgcggcc gcatcgatga tgttgctgga ggtcttctcc acttccatct tcaccgtgcc
     3361 gcgggtcagc ggggtgccgg tttccggaat cagcagcttg gccacgacca gggtggccgg
     3421 tgcggccatg atgctggctg ccagcaggtg cttggcgtag aacgcctgct gcaccgggtc
     3481 gccgccgccg agcatgccca cgtaggccgc cagcacgccg ccggcgatgt gggccatgcc
     3541 gccgatcatc atggtcagca gttcggactg ggtcatcttg gcgatgtacg ggcgcacggt
     3601 cagcggcgcc tcggtctggc cgatgaagac gctggcgcag acgctggtgg tttccgcacc
     3661 ggacacgcgc atcaccttgg tgatcgccca tgccatcacg cgcacgatcg cctgcatgat
     3721 gttcaggtgg tacatcacgc ccatcagcgc cgagaagaag atgatggtcg gcagcacctg
     3781 gaaggcgaag atgaagccgt agttcttggt gtccatcaac gagccgaaga tgaaacccga
     3841 gccttcgttg acgaagctca gcaccttgac gaagccatgg cccagcgcat cgaacacgtc
     3901 gcgcccgccc ggcaccagga tcaccagcgc cgcgaaggcg atctgcaggg tgataccggt
     3961 ggcaaccagc ttccagtcaa ccgcgcgctt gttgttggaa aacaaccagg tgatgccgat
     4021 cagcaccgcc aacccgaaca ggccgaagcc gatcctgccc aaaccttcga ccatgtgagt
     4081 gactcccctg gggcgtcgcg aaaaacggga agcctagtgc agggccgggg ccggggcaag
     4141 gaaaagcaac gtgcaggcgt ccatcggtac cgatcaggcc agcaacggca aggggttgcg
     4201 gccggcagcg gcaggtagaa tgaggctcga tcccggcccg gatgcgggcc cgcagcagga
     4261 gatttgcatg caataccgtc gcctgggctc caccggcctg ccgatttccg ccctgtcctt
     4321 cggtgcctgg gtgaccttcg gtgaccagat tccgcgcgac gaggcgcgca acctggtggc
     4381 ggccgcctgg gaccacggtg tcaacttctt cgacaacgcc gagggctacg ccaacggccg
     4441 cgccgaacag gtgatgggtg acgtgatcag cgacctgcgc ctgccgcgcg acggtttctg
     4501 cgtgtccagc aaggtgttct tcggcagcgc caaggacccg cggccgaccc agcgcggcct
     4561 gtcgcgcaag catgtgaccg atgcctgcca tgccgcgctc aagcgcctgc gggtggagta
     4621 cctggacctt tattactgcc accgcccgga tccggacgcc ccaatcgccg agaccgtgca
     4681 cgccatggac acgctggtgc ggcagggcaa gatcctctac tggggcacct cggagtggtc
     4741 ggccgcgcag atccagcagg cgctggacat cgccgaggcg cacaacctgc agggaccgtc
     4801 gatggagcag ccgcagtaca acctgctgca ccgcgagcgg gtagagctgg agtacgcacc
     4861 gctgtatgcg cgtgccggcc tggggaccac catcttctcg ccgctggcct cgggcctgtt
     4921 gaccggcaag tacgaccagg gcatcccggc cgatgcgcgg ctgggccgcc cgggcatgga
     4981 gtggttgcag gacatggtgc tgggggcgga cgccgaggcc cggctgggcc aggtgcgccg
     5041 cttcagcgag gtggcgcgtg cgctgggcca gtccccggcc accctggcca ttgcctggtg
     5101 cctgcgcaac ccgaacgtct ccagcgtgat cctcggcgcc agccgggtca gccagctgct
     5161 gcagaacctg caggcgctgg aggtgctgga gcaggtcgat gccgccggct gggcccaggt
     5221 cgaagccgtc ttcgcctgac tgccctttgt agagtcgagc caagctcgac tccggccctg
     5281 ggagagcagt cgagcagagc tcgactctcc aaagacgcta caccattttg attgatggca
     5341 actatcgaat ttccggattc gatcattaat ctcatcaatc aaattgagaa tggttgttga
     5401 ttgtcaactg agaatcatta tcatttaact cgtccctcgc acgagtccag atgctcatga
     5461 atgctcaacc tgtactgctg cgccccgaaa cgctgaccct ccgcgatcgt ccggtccgcg
     5521 tcgttccgcc ggaagaggtc atcgacagcg aagccctgct caagggccgt cgtgaaatcc
     5581 tgatccagca cggcgaccgt ttctatcgcc tgcggcacac cagcaacgac aagctgatcc
     5641 tgaccaagta accgcggcct ggtcgcccgc ctccctccct cctgccggca gcgccgacag
     5701 ggtgggcgac ccgtccgcgc ccgctctctc cccctcggtc tatcgcgcgc atcctccggg
     5761 tgtgccggta accgggggtt cccttgcctg accgaacgaa accgatgacc cgccataccg
     5821 ccctttgcct tgctgtctgg atggccctgc cgctgtccgc ccatgctgcc gccgctgcca
     5881 ccgccgcgcc cgacgcgcgc gaatttgatc gcgtgcaggt caccgccacc cgcaccgagc
     5941 gtgcggtgag tgatgtggcc gccacggtcg atgtgatcga ccgcgagcag atggaccggc
     6001 acctggtgca ggacatcaag gacctgctgc gttacgagcc gggcctgtcg gtcaaccgca
     6061 gcgcggcccg cttcggcctc ggcagcatcc gcatccgtgg cctggacggc aaccgcgtgc
     6121 gcgtgcagac cgatggcatc gccatgccga ccagcttcaa cattggttcg ttctccaatg
     6181 ccaaccgcaa cttcaccgac ctggacacgc tcaagcgcgt ggagatcgtg cgcggtccgg
     6241 ccagctcgtt gtatggctcg gacgcactcg gcggcgtggt cgcgttcgtc accaaggatc
     6301 cggccgacta cctgaaggac ggcaaggaca gctacgtcgg cctgaagttc ggctatgacg
     6361 gcgagtggaa gggcctgctt ggcggcgtca ccaccgcctt cggtggcgag cactggagcg
     6421 gcatggtcaa catcaaccat cgccagggcc aggaaaccgt caacaagggt gacgtgcgaa
     6481 gcctcgacaa cacccgcact gcgcccaacc cgcaggaccg cgatggtcgc agcggcctgg
     6541 ccaagctggt ctacgcgccg agcgaggacc agcgtttccg cctgaccgtg gaaggcaacg
     6601 aagacaagac cgagaccaac gtgctgtcgt cgatcgaccg caccaccacc accggcatga
     6661 aggcgcgcga caagcagaac cgcacccgcg tgtcgttcgc ccatgaaatg gatgcgctgg
     6721 acaagggctt tgccgacagc ctgcactggc aggtgtacag ccagaacagc gagaccaccc
     6781 aggtcaccga cgaggaccgc gccaaccgca gccgtcgtca ccgcgagttc actttcgacc
     6841 agcgcgtgta cggcctgcag gcgcagttca acaaggcctt cagcaccggc agcgtcgaac
     6901 acgcgttgac ctacggcttc gagggcgcac gcaccgaaat ccgccagaag cgcgatggtt
     6961 tccaggtgct ggccaacggc cagaccagca ccaccatcct gccggatgca ttcccggtgc
     7021 gcgatttccc gatcagcaag accaccgagc tgggccttta cgcgcaggat gagatgcgca
     7081 tggccggcgg caagctgtcg ctggtgccgg gcgtgcgcgt tgaccgctac gagctgaagc
     7141 cggaggtgga caacatcttt gccgaggaca atcccggcgt gccggtggcc aagctgacca
     7201 agaccagtgt ctcgccgaag ctgggcatgg tctatcgctt caccgacgaa tggtcgctgt
     7261 tcgccggcta ctcgcatggc ttccgttcgc cgccgtacaa cgacgtcaac ctcggcttca
     7321 ccaacttcgc cttcggctac accgccattc ccaatccgga cctgaagccg gaaaccagtg
     7381 atggcatgga gctgggcctg cgcttcctgt cgccggccgc ctacgtcagc gtcagtggct
     7441 actacaacga atacaaggac ttcatcgagt cgcagtcgct ggtcggcacc aacgcacagg
     7501 gcctgatggt gttccagtcg cgcaacatcg ccgacgcgcg catctacggc gcagaactga
     7561 aggccggtgt cgacttcggg cagatcagcc cggccctgca gggctgggcg ctgcgcagtg
     7621 cggtggcctg gtcgcgtggc gacaacaaga ccgaagacac gccgctggat tcggtcgacc
     7681 cgctgcgcgg caccgtcggc ctgatgtacg acaccgagac ctggggtgtc gagctggctg
     7741 gcacgttcgt caagcgcaag gaccggctgg ccagcaccac ggcctatcgc ccggcgggct
     7801 acggcgtgac cgacctgatg gcgcactgga acttcgcgcc gggcgcgacc ttcaatgtcg
     7861 gcgtgttcaa cctggccgac aagcgctaca tcgattggtc caacgtcggt tcgacgctgc
     7921 tgccgaccag ccgtgtgctg gaccgctata ccagcccggg ccgtaccttc tccgccagcc
     7981 ttgccgtttc ctggtgacct catgagccga gcattgtccg cacgcaggaa cgactccatc
     8041 gccgcaccga acggtgcggc ctggccgacc ccggcacagc tggccacgct cggcaccgtg
     8101 ttgtgcctgt atcacgccga cggcaacgaa ctgggcggct ggcgccaggc ggtgcgcgtg
     8161 catgcctgcc agggcgtgga cagcgagggc ctgcgcgaaa gcctgtgctt cctcgatggc
     8221 cgcggccgct gcgtgtggcg cctgtacctg ctgccggaca gcgatttcct ggcctgggac
     8281 cggctggtgg ccgcgctgcc gccgggaccg cagcacgaca gcgatggcag tgtcggcgag
     8341 cgcctgtggc gacgcctggc cggccacctc ggtggccagc gctggcggtt gtgcgcgctg
     8401 cgcctgcatg cggccgacga tggccgcacc ctggccgcca gcctgtcgac cctgtcctcg
     8461 ctgggcgccg ccaccgcgcg ccgtatcgct cgcctggaag gcgccgaagg cgagctggca
     8521 atcgacgact gctgctgcgc cgacgccgca cggcgaccgg caccgcggat acccggcgac
     8581 ctgccgctga tccgtctttg aacctgatgg aacgcctgtc ggccacggat ggcctctcaa
     8641 caaacctgca accctgaagg aagaccccga tgaagttcca gacagccagc gccctgctgt
     8701 tgctcgccgc cagcggcgtg gccagcgcgc agccctccga catcgcccgc gaccatgaca
     8761 gcatcctcgc catgcagggc gagtacaccg tggatttcgc tttcgacgag accgtgctgc
     8821 tgaagcccgg ttacgagcgc gcgccggcga tgcgcagcgg cggcaacgaa gtagtcatcg
     8881 tggtggaaga cacgccgaag cgcatcgtgc tgcagcacct gctgctggac gaaaagagcg
     8941 gccacatcac caagcactgg cgccaggatt gggtgtacga agcgccgaac cgcttcgagt
     9001 tcaatgccga ccagacctgg caggtgcgca ccattccggc ggcgaccaac cagggggcgt
     9061 ggacccagtg cgtgtatgaa gtgagcgacg caccgcgcta ctgcggcacc ggcaagtgga
     9121 cctacagcaa caacgtgccg agctggacca gcgacctgag ctggcgtccg ctgccgcgtc
     9181 gcgagtacac caagcgcagc gactacaacg cgctggccgt gatcaaccgc cacacgctga
     9241 ccccgaacgg ctggacccac gagcagttca acaccaaggt gcagcgcaat gccgatggca
     9301 gccaggtgga gatcgcgcgc gagttcggct tcaacgacta cgtgaagacc accgagatcg
     9361 acttcacccc ggcccgcaac tactggaagg ccaccgccgg ttactgggcg aaggtgcgcc
     9421 agcgctggga cggcttcctc ggccaggccc cgggcgtgca cctgaagacc aagatcgacg
     9481 gcatggcgat gatcatcccg ctgttcaccc aggccgaaga gatccaggcc ggcaagaagg
     9541 tgaaggacaa acagatcgac gaagtgttcg ccaagtacgt ggaaaaggca ccgaaggaag
     9601 gttgatcgcc gccgcggttc cggtgaggtg ccgggcgcgc ccggcaccgc atccacgcat
     9661 ggcgtggatc taccggtcca ttgctctttc ctgcatccac gcacggcgtg gatctaccgg
     9721 tccttcgtat tggtaggtgc cgagcttgct cggcacgctc tccggtccga cgccgcgtca
     9781 agcttcgcgc aaggcaaggg ccggcggcgc atgcaggatg cgccgcgtgc cccaccagcc
     9841 ggccagcagg ctcagcccga tgccgaccac gccgcccagc agcaggcccg gccacggcgg
     9901 cagcaacggc agctcgaaca ccttctgcga gaccgccacg ccgatggccg ccgccgcgcc
     9961 caccgccagc agcgccgcca atgtgcccag tgcgccgaat tccaccagca ccgcgccgcg
    10021 cagctggcgc cgggtagcgc ccagcgtgcg cagcaccgcg ctgtcatagc ggcgctcgcc
    10081 ggccgtggcc tgcagtgcag ccagcagcac cagcacgccg gccagcaggc tgaacaccat
    10141 caccagctgc accgcctgcg ccacccgctc catcacatcg cgcacctgcg agatcaccgc
    10201 atccacgtcc agcagtgaca ggttcggctg cgcgcgcacc agttcaccca gcccggcggc
    10261 cttgccggcc ggcagatgga acgccgacag caggttgtgc ggggtgtcgc ccaccgcgtt
    10321 ggggttcagc agcacgaaga agttcggtcg gaacgtgttc cagtccgcct tgcgcacgct
    10381 ggtgacggtg aattcgcgct cctgttcacc gacggcaatg ctgatgcggt cgccgctggc
    10441 caccccgtaa cgcttggccc agccgatctc caccgacgct tccggcgccg tgctgtcggc
    10501 cttccagaac gtgccgtcga ccagcgtgtt ggccggcggg aagctgttgc gccagctgaa
    10561 gttcaacggc cggttctcgt catcgtcgtc gcgctgggcc tcgccggatg ccggctgccc
    10621 gttctgttcc ggcgtgcggt ccacgcgcag cggcggcttg ccgttgatcg cgatcaggcg
    10681 gccggtggcc atcggttcga tgctggcatc gttggcgccc aatccgcgca gcgcggccag
    10741 cacgctgtca cgctgttcgg gctggatgtt gatcaggaag tagttcggcg tatctgcagg
    10801 cagccgctcg cgccactgct gcagcaggcc aggaccggtc accgccagca gcaacagcgc
    10861 gcacagcgac agcgacagcc cgaccagctg catcaccgcc agcatgcggc gccgggtcag
    10921 cgcggccagg cccagtcgcc agttgccatg caggcggtgc tgcaggccgc gcagcagctg
    10981 cagcagcacg aagccgacca caccggcggc cactgccagt gcggccagtc cacccagcac
    11041 ccacagggcc agcttcaggt cgccggtgac ctgcaccgcc agcagcaggc tggccgccag
    11101 cgccgcgaca taggccagca gcgatgccgg tggcagcgcg gcgaaggagc ggttgagcac
    11161 gcgcatcggc ggcaccccgc gcaggcgcag cagcggaggc aggccgaagc cgaacagcag
    11221 caacaggccg atgccggcac cggtcagcgc cggcatcgct tccggcagcg gcaggcgctg
    11281 cggcaccagg ctgcccagca cctgcaccag gccttcctgc gcggccatgc ccaggccgat
    11341 gccgagcgca caggccggca ccgccagcat cagcagctgc agtgccaggc cgaacaggat
    11401 gtcgcgctgg cgcgcgccca ggcagcgcag gatcgctacc tggtcgatgc ggcgcagggc
    11461 gaagcggttg gccgccagcg ccgtcgccac gccggccagc agcaccgcca gcagcgcgct
    11521 caggccgagg aagcgcccgg ccaggtcgaa cgcctggcgc acgccacgct gggtgtcgtc
    11581 cacgctcagc aggcgcaggc ccttgacctg cggcagcagc cattggcgca gcccggccac
    11641 ctgatcggcc gctccggcga acatcagccg gtagttgatg cggctgcccg ggccgagcag
    11701 gccagtgccc tccacatcgg cgcggttgac cagcagggtg ggcgagaggg tgagcaggtc
    11761 accgccggca tccggctcgg cctcgatgat gccggcaatg cgcagcgtgc cggcgccgaa
    11821 ctcgaggtca tcaccggcct tcagccccag cccctgcagc aggcgcggat cggcataggc
    11881 ctggcccttg gctggcatgc cggcgtcggc gatcagcgca ccgccgggcg tggcccgcac
    11941 ccgcagcgcg ccacgcagcg ggtaacctgc ctgcaccgcc ttgatgctgg ccatctggct
    12001 ggcctcgccg tggaacagca cgctgccgaa gctggcgatg cgggtgtagg ccagtccgcg
    12061 ccgctgcgct tcttcggcga aggcctgcgg cgggtcgtcg cgcccggcga tgccgaggtc
    12121 accgccgagc atttccgccg cactgcccgt cagggccagg ttgacccggt tgaccagggt
    12181 gccgaccgcg gtcatcaccg ccacgcccag caccaaggcc gcgaacacgg tcagcaggtc
    12241 gccggccagc gcctcgcggc gcagcgcgcg ccacgcatgg cgcagcaggt tcatgctgcc
    12301 gctccgcgct cgaccggcag caggcggccg tcgtcgatgc ggtggatgta ctggcagcgc
    12361 tgggccaggc gcaggtcgtg ggtgaccagc accagcgtgg tgccgctgcc ggcgttgagt
    12421 tcgaacagca ggtcgctgat gtgctggccg gtggcgtggt ccagcgagcc ggtcggttcg
    12481 tcggcgaaca ggatgcgcgg gcgggtgacg aaggcacgtg ccagggccac gcgctgctgc
    12541 tcgccgcccg acaactggcg cgggtagtga cgggcgcgat ggcccaggcc gacctgcgcc
    12601 agcacttcgt ccacccgcac ccggtcttcg cggccggcca gttccagcgg cagcgcgacg
    12661 ttctcggcag cggtcagcgc cggcagcagg tggaagctct ggaacacgaa gccgacctcg
    12721 cgtgcgcgca gctgggcgcg ggcttcctcg tcgagacggc ccagatcctg gccggccagc
    12781 gcaatgctgc cgcggctggg caggtccagc ccggccagca ggccgagcag ggtggtcttg
    12841 ccggaaccgg aggcgccgac gatggccacg ctggtgcctt catggacggt cagggtgatg
    12901 ttgtccagta tgtggacttc accctccggg ccctgcacgg acttgccgac ctggtcgacg
    12961 gcgatggcga cgggcgcgct gcggggggac aggctgtcga tgaggagact ccaatgcgca
    13021 agacgggatg gagccggcga gccggcgcga tgatggtgct gctgctaggg ttcctgctgc
    13081 tgcccgggct ggcctgtgcc aaaggtccgg cgggcaccgt gctggtactc ggcgacagcc
    13141 tcagtgctgc ccacaatatc cccgccgacg ccggctgggt cagcctgctg cagcagcggg
    13201 tcaggcagca gtcgaaaacg ccggcacgca tcgtcaacgc cagcatgagc ggggagacca
    13261 ccgccggcgc gctgacccgc ctgccgggcc tgttggcgaa ggagaagccg accgtggtgg
    13321 tgattgcgct gggcggcaac gacgcgctgc gtgggctgac cccggcgcag gtacagggca
    13381 acctggagaa aatggtgcag gccagccaga aggcgggcgc cagggtgctg ctgctgggca
    13441 tcgacgtgcc gcccaactac gggccggcct atcgtcagcg cctggcggcc gcctacaagg
    13501 cgctggctac gcagtacaag ctgccgctgc tgccgttcct gctggagggc gtggcgctgc
    13561 agccgggcat gatgcaggcc gatggcctgc accccacggc acaggcgcaa ccgaaggtgc
    13621 tggacaacgt ctggccactg ctcaggccgc tgctctgaac cgattgatga cctcttgacg
    13681 gaacttcaca tcgcgtccac cgtcgatccg gcatgtttca caaagctgaa gttagaggga
    13741 atcacatgcg tcagacgaag gagacctccg gcttggtgct ggtggtcgaa gacaaccgca
    13801 acatctccga gatgatcggg gaatacctgg aaggtcgcgg cttcgaagtc gactatgcac
    13861 aggacggcct ggatggctac cgcctcgcgg cggaaaacag ctatgacgtc gtggtgctcg
    13921 acttgatgtt gccgcgcctg gatggcatcg aagtgtgccg tcgcctgcgc aacgatgcgc
    13981 gcaagtccac cccggtgctg atgcttacgg cacgcgacac gctggacgac aagctcaccg
    14041 gcctcgggtt cggcgccgat gactacctga ccaagccgtt cgcgatccag gaactggagg
    14101 cgcgcctgcg cgcgctgatc cgccgcgagc gtcgccaggt cggttcggaa gtgctcaagg
    14161 tcgccgacct ggtgctcgat ccggtcagca tgcgtgccac ccgtgccggc accgagctgc
    14221 agctgtcgcc gatcggcctg cgcctgctga ccatcctgat gcgcgaatcg ccgcgcgtgg
    14281 tcacccgcca ggagatcgaa cgcgagatct ggggcaatgg cctgccggat tcggacaccc
    14341 tgcgcagcca cctgtacaac ctgcgcaaga tcatcgacaa gccgttcgac cgtccgctgc
    14401 tgcacaccgt gcagagtgcc ggctaccgca ttgccgatat cgcccagccg atggcctgat
    14461 cggggcccgc accggtgcag cagcaggccc ggccggggca tggccatgaa cgagggcagg
    14521 ggatgaccgg ctggcgttgc cgccggtcat cgcccgtgca cccgcacggc gcggcgcgct
    14581 gcctataatc gcagcgctct gaccgggacc ccgcaatgcc gcacggcctg ccgcgcaaga
    14641 tccgtatcgc cttcatcctg caggcagtgc tggccagcct gggcatcctg ctcggtgcct
    14701 ggctggtctc gctggtgatc aagcacagcc tggtcggcgc cgccctgcgc gaggaagcgg
    14761 cgtactactg gacgctgcac gaggcctcgc ccgtgcagcc gccaccgaac acccagaaca
    14821 tccgtggcta cctgctggaa agcgggcagt cggcgttgtc gctgccggcc aacctgcgca
    14881 acctggaacc cggtttccac gaactgccca aggacgacca gctggtgctg gtcgatgtgc
    14941 gcccagccgg ccgcctgtac ctggtgttcc tgcgctcgcg tgcggaaatg ctggcgttct
    15001 ggttcggcat cgtgccggtg ctgctgaccc tgctggcggt gtatggcgcc agctgggtga
    15061 cctaccgcgc ctccaagcgc ctggtgtcgc cggtgaactg gctggcgcgg cgcgtgtcgc
    15121 gctgggaccc tggccacccc gaggcggccg atctggagcc gaacaaactg ccggccgaca
    15181 tgcagggcga gacccggcag ctggcggccg ccctgcattc gctggccaac cgggtcagcg
    15241 cgcatgtggc gcgcgagcgc aacttcaccc gcgatgccag ccacgaactg cgcacgccgc
    15301 tgaccgtgat ccgcgtggcc agtgacatgg cactgggcga tgaaacgctg cagccgcgcc
    15361 tgcgtcgcag cctgcagcgc atccagcgcg ccggccgtga catggaagcg gtgatcgatg
    15421 cgttcctgat cctggcccgc gaggccgatg tcgagccgca gatcgagctg ttcgatgtca
    15481 acgacatcgt ccgctatgaa gtggacaacg ccaacgagct gttgggaaca cgcccggtgg
    15541 cggtgcacct gcacagcgat ggcccggtgc agctgcacgc gccgcctcgg gtgctgcagg
    15601 tggtggtcag caacctggtg cgcaacgcct gcagctacac cgacgaaggg cgcatcgacg
    15661 tgcatgtgct caacgaccgg gtggtggtgc gcgacaccgg catcggcatg tccgccgagg
    15721 cactgtcgcg ggcgttcgag ccgttctacc gcgccgagcc cagccgtccg cagggcaccg
    15781 gcctgggcct gtcgatcgtg cgccggctgt gcgaccgctt cggctggaag gtcagcctgg
    15841 ccagcgagcc ggggcagggc accgaggcga cggtcatttt ccggtagagg gctttggccg
    15901 ggctgcgccc ggcacccgcc gaggcaacat caacatcaaa agctggcatt ccgaggaggg
    15961 gcggggcggt gtgggggtgc aggacacgcc gtaaaccc
//
LOCUS       DAOKIP010000083        15932 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.083,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000083 DAOKIP010000000
VERSION     DAOKIP010000083.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 15932)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15932)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15932
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.083"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(88..1056)
                     /locus_tag="QEL58_002185"
     CDS             complement(88..1056)
                     /locus_tag="QEL58_002185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014645562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDS1676646.1"
                     /translation="MTTRPPPSPRFSYKSDRLKPLRAFCQTVRLGSVSRAAEALFVSQ
                     PAISLQLQALERELGVPLFERSGRRLVPSREGQLLYEMAQPLVENLDGLEARFRDKVR
                     GLDAGELNIAANSSTILYLLPKIVERFRMHHPDVRLTLHNAISADGTDLLREDAADLA
                     IGSMTDVPADLSYAPAYRFEQVLIAPHDHPLASGGELELADIARHPLVLPPKRQITYR
                     LVDQVFQRHRIAYTVALEVGGWEVIKQYVAMGMGISIVPALCLNEADHERLAARSMKR
                     WFPERSYGVIVRRGKALSAQARAFIEMIQPELFSPRDYDQSGHSER"
     gene            1167..2789
                     /locus_tag="QEL58_002186"
     CDS             1167..2789
                     /locus_tag="QEL58_002186"
                     /EC_number="2.3.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014645563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate synthase A"
                     /protein_id="HDS1676647.1"
                     /translation="MSAVASAVPTPAAKATPGIALATRVAGQDTVLPAPLLALLVSLH
                     RAVEPGRQARLQARRERQAFFDQGGLPDFREDTAAIRSGDWTVAPLPAALQDRRVEIT
                     GPTDPKMVINALNSGAKVFMADFEDSTSPTWRNLLAGQQSLAAAVRGDLEYTAPNGKH
                     YHLRPYDEQAVLIVRPRGWHLDEKHVRIDGQFIAGGLFDAAVFAFHNARALQAKDRGP
                     YFYLPKLQSMEEAALWETALSHIEGMLGLPHGQIKVTVLIETLPAVFEMDEILHALRD
                     RIVGLNCGRWDYIFSYLKTFRRHADRVLPERGQVTMTQPFLKAYSELLIQTCHRRGAH
                     AMGGMAAQIPINNDAAANEQAIARVRADKLREVTAGHDGTWVAHPALIAVAMAIFDEH
                     MPTPNQHSVLRQDVRVGRDELIARPPGTITRAGFEGNVEVCVRYLAAWLDGNGCVPIH
                     HLMEDAATAEISRSQLWQWLHTPGQQLDDGTAIDLALLDATLAQLPARLGDTAALPGG
                     ARIGEAIALLGELSRSDELTDFLTLPAYARID"
     gene            2856..4157
                     /gene="aceA"
                     /locus_tag="QEL58_002187"
     CDS             2856..4157
                     /gene="aceA"
                     /locus_tag="QEL58_002187"
                     /EC_number="4.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011345976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate lyase"
                     /protein_id="HDS1676648.1"
                     /translation="MSKLPTAEQIQHDWDTNPRWEGIQRNYSAADVVRLRGTVHIEHS
                     LARLGAEKLWASLHEREFVNALGALTGNQAMQQVKAGLKAIYLSGWQVAADANLAGQM
                     YPDQSLYPADSVPAVVKRINNTLLRADQLHHAEGKDDIDFLQPIVADAEAGFGGVLNA
                     FELMKAMIEAGAAGVHFEDQLASVKKCGHMGGKVLVPTREAIEKLNAARLAADVLGVP
                     TLLVARTDAEAADLLTSDIDGNDKPFATGERTVEGFYKTRNGLDQAISRGLAYAPYAD
                     LVWCETGKPDLEFARKFAEAIHAKFPGKLLAYNCSPSFNWKKNLDDATIAKFQRELGS
                     YGYKFQFITLAGFHALNYGMFNLAHGYARRQMSAFVELQEAEFEAAERGFTAVKHQRE
                     VGTGYFDAVTQAIQQGQSSTTALTGSTEEEQFHGGRSERAA"
     gene            4500..5540
                     /locus_tag="QEL58_002188"
     CDS             4500..5540
                     /locus_tag="QEL58_002188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019337655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HDS1676649.1"
                     /translation="MTGRGAAENSDVTSGIARVAMAEIVHALLSDAEVTLFARFARPC
                     KLHAGQWLFQRGHRGERMYVILEGQIELDFGEDLVIKTLGQHEFFGELGLLVGDHLRS
                     ASARALADCEVLELGPADFHRLVESDPGLVAYFLRRTIMRVLTNEQALISQLRRRNHD
                     LETALDNLYITTHQLTHTRELVRTDELTGLHNRRGLTLYLQECRTEQEGLPQALLLID
                     CDRFKQINDRHGHQAGDRVLQSMGNILRSMAGEQDLACRLGGDEFCLILRRGNHEIVQ
                     HAAEFILSAVHGLLERSHGTPHVSLVSIGASLLPPDAGWSEWYASADRALYQAKRDGG
                     NCLRWVDDPDGP"
     gene            5554..8043
                     /locus_tag="QEL58_002189"
     CDS             5554..8043
                     /locus_tag="QEL58_002189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014645566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative peptide modification system cyclase"
                     /protein_id="HDS1676650.1"
                     /translation="MNGDNGTSAPHSPQLRALLFTDLCDSLQLVERIGDVAAASLFQE
                     HDRLVLVLQHRWNGQLIDRSDGLFMLFERAIDALGFALDYQRELHALGQQRSIELRAR
                     AGLHVGDVLTWDNSPEAVRAGAKSMEVEGLAKPMAARLMMLARPGQILLSAVAESLTH
                     RATEALGERGTRLLWKSHGRWRFKGVPVVQEVIEVGEIGSAPLRMPRSNAKARRDLPL
                     WRQPVVLAAEGLVLAVLVLGGWLLLRPEPAIAFAERDWVVLADVDNLTGDPIFDESMR
                     HAIRIALEQSRYVNVLSEGKIRESLEMARLSGDTRLSRDTAVDVAVREGARAVLLPTV
                     RQKIGGYELAIDVAAPGSGQVIQTFTATADRSDQMVFAVDDVVGRLRRGLGESVASLE
                     QSLPLPRASTQDLRALRAFALAENALGQRRFEEARNLYQAAIDIDPGFALAYMGVAKL
                     LARTAQVQQARDALEHALAQQQRLPARERLYLKGWQAELEPGGWPLEQWRALAKIYPD
                     SFAGLSNTSWALLQDNRFTEAEPYARAATVPQDPLRLYPMIHLARAQLGVGQPQQAMR
                     TLHQAQMLRGNDEADDLEVDVLVAQGLDAQAQQVLMRLPRGDDLQQRMRLRAHLLVSA
                     EQRDCSSLHAAVAADGPAPELIDYQIHQRLQHATVTTLCTPGDVEELESIAAVLRPLL
                     RRNDDSAVGSRSLQLLALTYLAQRQGQHALAAEWLRDHGELLERQRSPVVGKWRRVVL
                     AMAELAQQRPQAARHLLEPSFDGSEPVQAHVVLLQALRAEQDAAGVRREQAWLARHHG
                     QAIAEVASMQVWQPLNVHDIATEATSVRLPR"
     gene            complement(8051..8347)
                     /locus_tag="QEL58_002190"
     CDS             complement(8051..8347)
                     /locus_tag="QEL58_002190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NHLP-related RiPP peptide"
                     /protein_id="HDS1676651.1"
                     /translation="MSTHPRLSAEDASTLLDHLIGNDDFRNRFTASPAKALASIGLDG
                     AVGENDCMKIGTLASVEELCRTRDSLHAYLSTSTASMTVVFCFEADRIDERVNA"
     gene            8486..9652
                     /locus_tag="QEL58_002191"
     CDS             8486..9652
                     /locus_tag="QEL58_002191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005420721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative peptide maturation dehydrogenase"
                     /protein_id="HDS1676652.1"
                     /translation="MRLRRCASLMFEPRESVTLDLRAMLAGHTEMDSQISWVALAAHL
                     DQPLPVDAEERQLLGELSAHRWSEPPADASPAMLARLVEQGLLLTDPPSEVGHQMRDE
                     ALRRSQWWPLAALAHRHARWQAVDSVEDMRRQGLDTAAGLRQRLGPPPPVVQPMQGDY
                     QPLPRSDEAAFDALLARRTTCRNFDPQRALPLPLLAQVLQRTLMAHAVQKVERDTEFL
                     KKNVPSGGGLHPTEGFLLVQNVEGLAPGLYHYHPVQHAVLPLPSPPPPSLPALARRML
                     SGQEWFADAPALLVLAPRYDRCFWKYRNHAKAHRAVTLDVGHISQLLYLCATERGLAA
                     FVTAAINDADVDRAFGFDGIGQSAMAICGLGWRSATLDTAEFDPAGRVLAGDDR"
     gene            complement(9672..11654)
                     /locus_tag="QEL58_002192"
     CDS             complement(9672..11654)
                     /locus_tag="QEL58_002192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005420719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl/propionyl/methylcrotonyl-CoA carboxylase
                     subunit alpha"
                     /protein_id="HDS1676653.1"
                     /translation="MFTKVLIANRGEIACRVIATCRRLGIATVAVYSDADRNARHVRL
                     ADEAIHIGPAAARESYLRSDALLDAARLTGAQAIHPGYGFLSENADFADACAAAGVTF
                     IGPPASAIRAMGDKSAAKALMAKAGVPLTPGYHGDQQDPAFLRAQADAIGYPVLIKAS
                     AGGGGKGMRKVERSEDFVDALASCQREAASAFGNDHVLVEKYVERPRHIEIQVFGDSH
                     GEAVYLFERDCSVQRRHQKVLEEAPAPGMSAERRAAMGQAAVDAARAVGYVGAGTVEF
                     IAGPDGDFYFMEMNTRLQVEHPVTEYITGTDLVEWQLRVAAGQPLPLRQDQLAIHGHA
                     IEARLYAEDADRGFLPSTGTLRRLRLPTPSANVRVDTGVEEGDSITPYYDPMIAKLIV
                     WDVDREAALRRMSQALADCQVVGVTTNAGFLRRLVNTDSFAHAKLDTALIEREQAALN
                     AVGDSDEALWQLAAIAAVASTAQAGRDARDPHSPWQAQDGWRLGASAPRVLPLQQGER
                     RHTLKVWVQADGWRVQCDDAAPVQVTGTADAQGMTVQLEGRRWSLQALREGDQLYLFG
                     ADGQHRFTLHDPVGESDHAAADAGSLLAPMPGRIVATLVAAGTQVKRGTPLVVLEAMK
                     MEHTLQAPADGTVKGYRAKAGDQVGDGAVLVDFEAA"
     gene            complement(11681..13291)
                     /locus_tag="QEL58_002193"
     CDS             complement(11681..13291)
                     /locus_tag="QEL58_002193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012437049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylcrotonoyl-CoA carboxylase"
                     /protein_id="HDS1676654.1"
                     /translation="MTVLNSQLQPGSETFEANRTAMQAVVDDLHATLARTALGGNEAA
                     RAKHTARGKLLVRDRIDALLDPGSAFLEIAPLAAHGMYDDAVPAAGVVAGIGRVSGVE
                     CVIVANDATVKGGTYYPMTVKKHLRAQEIAEQNHLPCIYLVDSGGAFLPLQDEVFPDR
                     DHFGRIFYNQANLSAQGIPQIACVMGSCTAGGAYVPAMSDETVIVREQGTIFLGGPPL
                     VKAATGEVVTAEELGGADVHTRISGVADHMADNDLQALARVRAIIAQLNWRKPEPAMA
                     VLASEEPLLPAHELYGVIPADTRKPYDVREVIARLVDGSRFDEFKPRYGATLVTGFAH
                     LNGYPIGIIANNGILFSESALKGAHFIELCTQRNIPLVFLQNITGFMVGRKYEQGGIA
                     KDGAKLVMAVACAKVPKFTVVIGGSFGAGNYGMCGRAYSPNFLWMWPNARIGVMGGEQ
                     AASVLATVKRDGIEAKGGQWPAAEEDAFKAPIREQFEQQGHPYYASARLWDDGVIDPV
                     DTRRVLALALSASLNAAPQQTRFGVFRM"
     gene            complement(13302..14465)
                     /locus_tag="QEL58_002194"
     CDS             complement(13302..14465)
                     /locus_tag="QEL58_002194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005407660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isovaleryl-CoA dehydrogenase"
                     /protein_id="HDS1676655.1"
                     /translation="MHVPSLNFDLGEDIDLLRQSVAHFAAAEVAPLAAEADATNQFPL
                     ALWPKLGEQGLLGLTVEEEYGGTGMGYLAHVVAMEEISRASGGIGLSYGAHSNLCVNQ
                     LRKNGSEEQKQRFLPGLCNGSLVGALAMSEPGAGSDVVSMKLRADKRGDRYVLNGNKM
                     WITNGPDADVLVVYAKTDIEAGAKGITAFLVEKGMKGFSTAQKLDKLGMRSSPTCELV
                     FQDCEIPEENVLGQVGGGVRVLMSGLDYERVVLSGGPLGLMAAAMDVVMPYVHERHQF
                     GEPIGSFQLIQAKIADMYVGLGACRAYVYAVARACDQGRTTRQDAAGAILYAAEKATW
                     LTGQAIQILGGNGYINEYPTGRLWRDAKLYEIGAGTSEIRRMLIGRELFQRTL"
     gene            14626..15234
                     /locus_tag="QEL58_002195"
     CDS             14626..15234
                     /locus_tag="QEL58_002195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012509748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HDS1676656.1"
                     /translation="MAYKRSALMEERLAGARERILLATRELVAAGGWRNAPVTAVATQ
                     AGVSTGLIYRHFPSKADLFVEVLNAAVAHEVAIMERIASGPEVASERLRLAITAFVRR
                     ALAGPGLAHAFIVEPVDPDVEAERMRGRRAFGDVFLRLVEEGVAAGELPVQDAHVAAA
                     CLVGAFTEAMVGPTAPSREAHRDEDALVDAICSFCLRAIGAR"
     gene            15420..>15932
                     /locus_tag="QEL58_002196"
     CDS             15420..>15932
                     /locus_tag="QEL58_002196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005921137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c5 family protein"
                     /protein_id="HDS1676657.1"
                     /translation="MRNYDLEFLKRFSMVIALLATITLGLILLAAYIHTRIPPEVSPT
                     AAKRTEQRISPTGAVYAGSTGAAAQAAAKAAALAKAASQVAYGGTKDGKVIFDNLCTA
                     CHTTGVGMAPTLDHSHWDKRIAQGKDTLYKHAIEGYTGPDGGIMPPKGGNPALTEEQI
                     HATVDWMLGNL"
BASE COUNT         2593 a         5395 c         5420 g         2524 t
ORIGIN      
        1 cgcaccgcca tcccacggat agcccgctgt tgccgttgct tctgcctctg caggtgcagg
       61 gcggcagccc tgcaaaccag gaaactccta ccgctcggaa tgcccgctct ggtcgtaatc
      121 gcgcggactg aacaactccg gctggatcat ctcgatgaac gcccgcgcct gcgccgacaa
      181 cgccttgccg cggcgcacga tcaccccgta gctgcgctcc gggaaccagc gcttcatcga
      241 ccgcgccgcc agccgctcgt ggtcggcttc gttcaggcac agcgccggca cgatggaaat
      301 gcccatgccc atcgccacgt actgcttgat cacctcccag ccaccgacct ccagcgccac
      361 ggtgtaggcg atgcggtggc gctggaacac ctggtcgacc aggcggtagg tgatctgccg
      421 cttcggcggc agcaccagcg gatggcgcgc gatgtcggcc agctccagct cgccgccact
      481 ggccagcgga tggtcgtgcg gcgcgatcag cacctgttcg aagcggtaag ccggggcata
      541 gctgaggtcg gccggcacat cggtcatcga accgatcgcc aggtcggccg catcctcgcg
      601 cagcaggtcg gtgccatcgg cactgatcgc gttgtgcagg gtcaggcgca cgtccggatg
      661 atgcatccgg aagcgctcga cgatcttcgg cagcaggtac aggatggtcg aactgttggc
      721 ggcgatgttc agctcgcccg cgtccagccc gcgcaccttg tcgcggaagc gtgcctccag
      781 cccgtccagg ttctccacca gtggctgcgc catttcatac agcagctggc cctcgcggct
      841 gggcaccagg cggcgcccgc tgcgctcgaa cagcggcacc cccagctccc gttccaaggc
      901 ctgcagctgc aggctgatcg ccggctggct gacgaaaagt gcctcagccg cccgtgagac
      961 agagcccagg cgcaccgtct ggcagaacgc gcgcagcggt ttcaaccggt cggatttgta
     1021 ggaaaaacgc ggacttggcg gtgggcgtgt ggtcatcgcg tcacaagtat tagcacaatt
     1081 tatgtagaac attgcaaaaa ctgttttgcc aaatactcgg ccccggcggc accgtggaga
     1141 cgttccccca ctgctggagt cgcctcatgt ccgccgtcgc ttccgctgtt cccacccccg
     1201 ctgccaaggc cacccccggc atcgccctgg cgacccgcgt ggccggccag gacaccgtgc
     1261 tgccggcgcc gctgctggcc ctgctggtgt cgctgcaccg cgcggtggaa ccgggccggc
     1321 aggcacggct gcaggcgcgc cgcgaacgcc aggcgttctt cgaccagggc ggcctgccgg
     1381 atttccgcga agacaccgcc gcgatccgca gcggcgactg gaccgtcgcc ccgctgccgg
     1441 ccgcgctgca ggaccgccgc gtcgagatca ccggcccaac cgatccgaag atggtcatca
     1501 acgcactgaa ctccggcgcc aaggtgttca tggccgactt cgaggattcg acctcgccga
     1561 cctggcgcaa cctgctggcc gggcagcagt cgctggccgc cgccgtgcgt ggtgacctgg
     1621 aatacaccgc acccaatgga aagcactacc acctgcgccc gtacgacgag caggcggtgc
     1681 tgatcgttcg cccgcgtggc tggcacctgg acgagaagca cgtgcgcatc gatggccagt
     1741 tcatcgccgg cggcctgttc gatgcggcgg tgttcgcttt ccacaacgcc cgcgccctgc
     1801 aggccaagga ccgcggcccg tacttctacc tgcccaagct gcagagcatg gaagaagcgg
     1861 cgctgtggga gaccgcgctg tcgcacatcg aaggcatgct cggcctgccg cacggccaga
     1921 tcaaggtgac cgtgctgatc gaaacgctgc cggcggtgtt cgagatggac gagatcctgc
     1981 acgcgctgcg cgaccgcatc gtcggcctga actgcgggcg ctgggactac atcttctcct
     2041 acctgaagac cttccgccgc cacgccgacc gcgtgctgcc cgagcgcggc caggtgacca
     2101 tgacccagcc gttcctgaag gcgtattcgg aactgctgat ccagacctgc caccgccgcg
     2161 gtgcgcatgc gatgggcggc atggccgcgc agatcccgat caacaacgat gcggccgcca
     2221 acgaacaggc gatagcccgc gtgcgcgccg acaagctgcg cgaagtgacc gccggccacg
     2281 acggtacctg ggtcgcgcat ccggcgctga ttgcggtggc gatggcgatc ttcgacgagc
     2341 acatgcctac cccgaaccag cacagcgtgc tgcgccagga tgtgcgtgtc ggccgcgacg
     2401 aactgatcgc gcggccgccg ggcaccatca cccgcgccgg cttcgaaggc aacgtggaag
     2461 tctgcgtgcg ctacctggcc gcatggctgg atggcaacgg ctgcgtgccg atccatcacc
     2521 tgatggagga cgcagccacc gccgagatca gccgcagcca gctgtggcaa tggctgcaca
     2581 cgccgggcca gcaactggac gacggcaccg cgatcgacct ggccctgctc gatgccacgc
     2641 tggcgcagct gccggcgcgg ctgggcgata ccgccgcgct gcccggtggc gcacgcatcg
     2701 gcgaggccat cgccctgctg ggcgaactga gccgcagcga cgaactgacc gatttcctga
     2761 ccctgccggc ctacgcacgc atcgactgat cgagcgcccg cgttccaccg ccgcttccct
     2821 ccccgctgca cgcaccaacc gaactggaga aagacatgag caagctgccc actgccgaac
     2881 agatccagca cgactgggat accaacccgc gctgggaagg catccagcgc aactacagcg
     2941 ccgccgacgt ggtgcgcctg cgcggcaccg tgcacatcga gcattcgctg gcccgcctgg
     3001 gcgcggaaaa gctgtgggca tcgctgcatg agcgcgaatt cgtcaacgcg ctgggtgcgc
     3061 tgaccggcaa ccaggccatg cagcaggtca aggccggcct gaaggcgatc tacctgtccg
     3121 gctggcaggt ggcggccgac gccaacctgg cggggcagat gtacccggac cagtcgctgt
     3181 acccggccga ttcggtgccg gcggtggtca agcgcatcaa caacaccctg ctgcgcgccg
     3241 accagctgca ccatgccgaa ggcaaggacg acatcgattt cctgcagccg atcgtggccg
     3301 acgccgaagc cggtttcggc ggcgtgctca acgccttcga actgatgaag gcgatgatcg
     3361 aggccggtgc tgcaggcgtg cacttcgaag accagttggc ctcggtgaag aagtgcggcc
     3421 acatgggcgg caaggtgctg gtgccgaccc gcgaggcgat cgagaagctc aacgccgcgc
     3481 gcctggccgc ggacgtgctg ggcgtgccga ccctgctggt ggcgcgcacc gatgccgaag
     3541 ccgccgatct gctgaccagc gacatcgacg gcaacgacaa accgttcgcc accggcgagc
     3601 gcaccgtgga aggcttctac aagacccgca atggcctgga ccaggcgatc agccgcggcc
     3661 tggcctacgc accctacgcc gacctggtgt ggtgcgagac cggcaagccg gacctggagt
     3721 tcgcgcgcaa gttcgccgag gcgatccatg cgaagttccc gggcaagctg ctggcctaca
     3781 actgctcgcc cagcttcaac tggaagaaaa acctggacga cgcgaccatt gcgaagttcc
     3841 agcgcgagct gggcagctac ggctacaagt tccagttcat caccctggcc ggtttccacg
     3901 cgctgaacta cggcatgttc aacctggccc acggctatgc gcgtcgccag atgagcgcct
     3961 tcgtagagct gcaggaagcc gagttcgaag cagccgagcg tggcttcacc gcggtcaagc
     4021 accagcgcga ggtcggtacc ggctacttcg acgcggtgac ccaggcgatc cagcagggcc
     4081 agtcgtcgac cactgcgctg accggctcga ccgaggaaga gcagttccac ggcggccgca
     4141 gcgagcgcgc ggcgtaatgc ggtagggctt cagaacgatc agggtggcca gggaagggcc
     4201 aagcaacgcc ggccggtcgg gggacctgcc ggcgttgttg tatcggtaga acagcggtga
     4261 acgcgggtag cgtcaatccg gcgcaccccc agcgcggaaa cttggccgaa accctgtgaa
     4321 gacggccatc ggattgatcc ggcaggactt ttgggcaggt gaaggtgacc agaacgggcc
     4381 accacgcatc ttcacatcgg acaagcgcgc cggaaggttc aaaatgagat agggcgcaca
     4441 ctttaaagcg atgctatgct ccgcggctca ccaggggacg ctggcggcgg gtgcagggaa
     4501 tgaccggcag gggtgcggcc gagaacagtg atgtgacgtc aggtatcgcc cgggtggcga
     4561 tggccgagat cgtgcacgcg ctgctgtccg atgccgaggt gacattgttc gccagattcg
     4621 cccgcccatg caagcttcat gccggacagt ggctgttcca gcggggccac cgtggcgaac
     4681 gcatgtatgt gatcctcgaa ggccagatcg aactggactt cggcgaagac ctggtgatca
     4741 agaccctcgg ccagcatgag ttcttcggcg aactgggcct gctggtgggc gaccacctgc
     4801 gcagtgccag cgcccgtgcc ctggccgact gtgaagtgct ggaactgggg ccggccgatt
     4861 tccatcgcct ggtcgaatcc gatcccggcc tggtcgccta cttcctgcgc cgcacgatca
     4921 tgcgcgtgct gaccaacgaa caggccctga tcagccagct gcgccggcgc aaccatgatc
     4981 tggaaaccgc gctggacaac ctgtacatca ccacccatca gctgacccat acgcgcgagc
     5041 tggtgcgcac cgatgaactg accgggctgc acaaccgccg cggtctgacc ctgtacctgc
     5101 aggaatgccg taccgaacag gaagggctgc cgcaggcctt gctgctgatc gactgcgacc
     5161 gcttcaagca gatcaatgac cgccatggcc accaggccgg cgaccgcgtg ctgcagagca
     5221 tgggcaacat cctgcgctcg atggccggcg agcaggacct ggcctgccgg ctgggcggcg
     5281 acgagttctg cctgatcctg cgccgtggca accacgaaat cgtccagcac gcggctgagt
     5341 tcattctgag tgcggtgcat ggcctgcttg aacgcagcca tggcacgccg cacgtgagcc
     5401 tggtcagcat cggcgccagc ctgctgccgc cggatgccgg ctggagcgaa tggtatgcca
     5461 gcgccgatcg cgcgctgtac caggccaagc gcgatggcgg caactgcctg cgctgggtgg
     5521 atgatccgga cggcccatag ggagaggcag gcaatgaatg gcgacaacgg aacgtcagcc
     5581 ccgcatagcc cccagctacg cgccctgttg ttcaccgatc tgtgtgattc gctgcagctg
     5641 gtcgagcgga tcggcgatgt ggcggccgcg agcctgttcc aggaacacga tcggctggtg
     5701 ctggtgctgc agcaccgctg gaacggccag ctgatcgatc gctccgacgg attgttcatg
     5761 ctgttcgagc gcgccatcga tgcgctgggc ttcgctctgg actaccagcg cgaactgcat
     5821 gcgctgggcc agcagcgctc gattgaactg cgtgcgcgtg ccggcctgca cgtgggcgac
     5881 gtgctgacct gggacaacag ccctgaagcg gtccgcgccg gcgccaagtc gatggaagtg
     5941 gaaggcctgg ccaagccgat ggcggcgcgc ttgatgatgc tggcacgccc gggccagatc
     6001 ctgttgtcgg ccgtggccga atcgctgacc caccgcgcca ccgaagcgct cggcgagcgt
     6061 ggcacgcgcc tgctgtggaa gtcgcacgga cgctggcgct tcaagggtgt gccggtggtg
     6121 caggaagtga tcgaagtggg cgagatcggg tcggcgccac tgcgcatgcc gcgctccaat
     6181 gccaaggcac gccgcgatct tccactgtgg cggcagccgg tggtgctggc cgccgaaggc
     6241 ctggtgctgg cagtgctggt gctgggcggc tggctgctgc tgcggccgga accggcgatc
     6301 gccttcgccg agcgcgactg ggtggtgctg gccgatgtcg acaacctgac cggtgacccg
     6361 atcttcgacg agtcgatgcg tcacgcgatc cgcatcgcgc tggagcagtc gcggtacgtg
     6421 aacgtgctgt ccgagggcaa gatccgcgaa agcctggaga tggcccggct ttcgggcgat
     6481 acccgcctga gccgggatac cgcagtcgac gtggcagtgc gcgaaggcgc gcgggccgtg
     6541 ctgttgccga ccgtgcggca gaagatcggc ggctacgagc tggccatcga cgtcgctgca
     6601 ccgggcagcg gccaggtgat acagacgttc accgccaccg cggatcgatc cgatcagatg
     6661 gtgttcgcag tggacgacgt ggtcgggcgc ctgcgccgtg gcctgggcga gtcggtggcg
     6721 agcctggagc agtcgttgcc actgccgcgg gcttcgaccc aggacctgcg cgccctgcgt
     6781 gcgttcgcgc tggccgagaa cgcactgggc cagcgtcgct tcgaggaagc acgcaacctc
     6841 taccaggcgg cgatcgatat cgatcctggc tttgccctgg cctacatggg cgtggccaag
     6901 ctgctggccc gcacagcgca ggtccagcag gcgcgtgacg cgctggagca cgcgctggcc
     6961 cagcagcagc gcctgcccgc gcgcgagcgg ctgtacctga agggctggca ggccgaactg
     7021 gaacccggtg gctggccgct ggagcagtgg cgcgcactgg ccaagatcta tccggattca
     7081 tttgcgggac tgtccaatac ctcctgggcg ctgctgcagg acaatcgctt caccgaggcc
     7141 gagccttatg cgcgcgcggc gacggtgcct caggacccgt tgcggctgta tccgatgatc
     7201 catctggcgc gggcacagtt gggcgttggc cagccgcagc aggcaatgcg caccttgcat
     7261 caggcacaga tgctgcgcgg caatgatgag gccgacgacc tggaggtgga cgtactggtt
     7321 gcacagggcc tggacgcaca ggcgcagcag gtgttgatgc ggttgccgcg gggggatgac
     7381 ctgcagcagc gcatgcggct gcgggcgcac ctgctggtat ctgcggagca gcgtgattgc
     7441 agcagcctgc atgccgcggt tgctgcggat ggtccagcac cggagctgat cgactaccag
     7501 atccatcaac gcctgcagca cgctacggtg accacgctgt gcacgcccgg cgatgtggag
     7561 gagcttgaat ccatcgccgc cgtgctgcgg ccgctgctgc gcaggaacga cgattccgcc
     7621 gtgggcagcc gcagcctgca actgctggcc ctgacctatc tggcccagcg ccagggccag
     7681 catgcgctgg ccgcagagtg gctgcgcgac catggcgaac tgctggagcg gcagcgcagc
     7741 cccgtggtgg gcaagtggcg ccgcgtggtg ctggcgatgg ccgagctggc acaacaacga
     7801 ccgcaggcgg cgcgccatct gctcgagccc agctttgatg gcagcgagcc ggtgcaggcc
     7861 catgtcgtgc tgctgcaggc actgcgtgcc gagcaggatg ctgccggcgt gcgccgcgaa
     7921 caggcctggc tggcccggca ccacggccag gccattgctg aagttgcttc gatgcaggtc
     7981 tggcagcccc tgaacgtgca cgacatcgcc acggaggcga cgtcggtgcg gctgccgcgc
     8041 tgatgcaggc tcaggcgttg acgcgctcgt cgatgcggtc ggcttcgaaa cagaacacca
     8101 ccgtcatcga ggcggtcgag gtgctcaggt atgcatgcag cgaatcgcgc gtgcggcaca
     8161 gctcctcgac cgacgccagg gtaccgatct tcatgcagtc gttttcgccg acagcgccgt
     8221 ccaggccgat cgaggccagg gccttggccg gcgaagcggt gaagcggttg cggaagtcgt
     8281 cgttgccgat caggtggtcc agcagggtgc tggcgtcttc ggcggaaagg cggggatggg
     8341 tgctcatggg gatcttccgt aggtggaatg tttcgtatcg gccgcgacag cctgccattg
     8401 agggccgtgg cgcgttcatc gctaaagttg gccgcgctgc ggtcgctgct gctatgccgg
     8461 ttgtgcggca gaaggaagga aacccatgcg cctgcgccgc tgcgccagcc tgatgttcga
     8521 accccgcgag tcggtcaccc tggacctgcg cgcgatgctg gccggccaca ccgagatgga
     8581 cagccagatc agctgggtgg ccctggccgc ccatctggac cagcccctgc cggtggatgc
     8641 cgaggagcgc cagctgctgg gcgaactcag cgcgcaccgc tggagcgagc caccggccga
     8701 tgcctccccg gcgatgctgg cgcgcctggt tgaacagggc ctgctgctga ccgacccgcc
     8761 cagcgaggtg gggcaccaga tgcgtgatga ggcgctgcgg cgcagccagt ggtggccgct
     8821 ggccgcactg gcccatcgcc acgcgcgttg gcaggccgtg gacagcgtgg aggacatgcg
     8881 ccggcagggg ctggacacgg ccgccggcct gcgccagcgg ctggggccgc caccgccggt
     8941 ggtgcagccg atgcagggcg attaccagcc gctgccgcgc agcgacgaag ccgcgttcga
     9001 cgcactgctg gcgcggcgta ccacctgccg caacttcgac ccgcagcgcg cgttgccgct
     9061 gccgctgctg gcccaggtgc tgcagcgcac gctgatggcg cacgccgtgc agaaggtcga
     9121 gcgcgatacc gagttcctga agaagaacgt accctccggc ggtggcctgc atcccaccga
     9181 gggcttcctg ctggtgcaga acgtggaggg gctggcacca ggcctgtacc actaccatcc
     9241 cgtgcagcac gccgtgctgc ccctgccttc accgccgccg ccgtcgctgc ctgcgctggc
     9301 gcggcggatg ctgtccgggc aggagtggtt tgccgatgcg ccagcgctgc tggtgctggc
     9361 gcctcgttat gaccgctgct tctggaagta ccgcaaccat gccaaggcgc accgtgcggt
     9421 gacgctggat gtcggccata tctcgcagct gctgtacctg tgcgcgaccg agcgcgggct
     9481 ggccgcgttc gtgaccgcgg ccatcaacga tgccgatgtc gatcgggcgt tcggcttcga
     9541 cggcatcggc cagagcgcaa tggccatctg tggcctgggc tggcgtagcg ccacgctgga
     9601 caccgcggaa ttcgatcccg ccggtcgcgt gttggcgggc gacgaccgct gagcggtcgc
     9661 cgccccggca atcacgccgc ttcgaagtcc accagcaccg cgccgtcgcc gacctggtcg
     9721 ccggccttgg cgcggtagcc cttcaccgtg ccatcggccg gggcctgcag ggtgtgttcc
     9781 atcttcatcg cttccagcac caccagtggc gtgccgcgct tgacctgggt gccggccgcg
     9841 accagcgtgg ccacgatcct gcccggcatc ggtgccagca ggctgccggc atcggccgcg
     9901 gcgtggtccg attcgcccac cggatcgtgc agggtgaagc ggtgctggcc atcggcacca
     9961 aacaggtaca gctggtcgcc ttcgcgcagc gcctgcaacg accagcggcg gccctccagc
    10021 tgcacggtca tgccctgcgc atcggcggtg ccagtcacct gcaccggcgc ggcgtcatcg
    10081 cactgcaccc gccagccgtc ggcctgcacc cacaccttca gcgtgtgccg gcgctcgccc
    10141 tgttgcagcg gcagtacgcg cggtgccgaa gcacccagac gccaaccgtc ctgcgcctgc
    10201 cacggcgaat gcggatcgcg tgcatcgcgg ccggcctgcg cggtgctggc cacggcggcg
    10261 atggccgcca gctgccacag cgcctcgtcg ctgtcaccca cggcgttcag cgcggcctgt
    10321 tcgcgctcga tcagcgcagt gtccagcttc gcgtgtgcaa acgaatcggt gttgaccagg
    10381 cgacgcagga agccggcatt ggtggtcacg cccaccacct ggcagtcggc cagggcctgg
    10441 ctcatgcggc gcagggcggc ctcgcggtcc acgtcccaga cgatcagctt ggcgatcatc
    10501 gggtcgtagt acggggtgat gctgtcgcct tcctccacgc cggtatccac gcgcacgttc
    10561 gccgaaggcg tcggcaggcg aaggcggcgc agggtgccgg tggagggcaa gaagccgcgg
    10621 tccgcatctt cggcatacag gcgcgcttcg atggcgtggc cgtggatggc cagctggtcc
    10681 tggcgcagcg gcagcggctg gccagcggcc acgcgcagct gccattccac cagatcggtg
    10741 ccggtgatgt actcggtcac cgggtgttcc acctgcaggc gggtgttcat ttccatgaag
    10801 tagaaatcgc cgtccgggcc ggcaatgaac tccacggtgc cggcaccgac gtagcccacc
    10861 gcacgcgcgg catccaccgc cgcctggccc atcgctgcgc ggcgttcggc gctcatgcct
    10921 ggggccgggg cttcttccag caccttctgg tggcggcgct gcaccgagca gtcgcgctcg
    10981 aacaggtaca ccgcctcacc gtggctgtcg ccgaacacct ggatctcgat atggcgcggg
    11041 cgctcgacgt acttctcgac cagcacgtga tcgttgccga acgccgaggc cgcctcgcgc
    11101 tggcagctgg ccagcgcatc gacgaagtcc tcgctgcgtt cgaccttgcg catgcccttg
    11161 ccgccaccac cggcgctggc cttgatcagc accgggtagc cgatggcatc ggcctgcgcg
    11221 cgcaggaagg ccgggtcctg ctggtcgccg tggtagcccg gggtgagtgg cacgccggcc
    11281 ttggccatca gcgccttggc tgcgctcttg tcgcccatcg cgcggatcgc gctggccggc
    11341 ggcccgatga aggtgacgcc ggcggcggcg caggcatcgg cgaagtcggc gttctcggac
    11401 aggaagccgt agccggggtg gatcgcctgt gcgccagtga ggcgtgcggc gtcgagaagg
    11461 gcatcgctgc gcaggtagct ttcgcgtgcg gcggccgggc cgatgtggat ggcttcgtcg
    11521 gccaggcgca cgtggcgcgc gttgcggtcg gcatcggaat acaccgccac ggtggcgatg
    11581 ccgaggcggc ggcaggtggc gatgacgcgg caggcgatct cgccacggtt ggcgatcagg
    11641 actttggtga acatggcaac agactctgtc atggcacggg ttacatgcgg aacacgccga
    11701 agcgcgtctg ctgcggggcg gcgttgaggc tggccgacag ggccagagcg agcacccggc
    11761 gggtgtcgac cggatcgatc acgccgtcat cccacagccg cgcgctggcg taataggggt
    11821 ggccctgctg ctcgaactgc tcgcggatcg gcgccttgaa ggcatcttct tccgccgccg
    11881 gccactgccc gcccttggct tcgatgccat cgcgcttgac cgttgccagc acgctggcgg
    11941 cctgttcgcc gcccatcacg ccgatgcgcg cgttcggcca catccacagg aagttgggcg
    12001 agtacgcgcg gccgcacatg ccgtagttgc cggcgccgaa cgaaccaccg atgaccaccg
    12061 tgaacttggg caccttggcg caggccaccg ccatcaccag cttggcgccg tcttttgcga
    12121 tgccgccctg ttcgtacttg cggccgacca tgaagccggt gatgttctgc aggaatacca
    12181 gcgggatgtt gcgctgggtg cacagttcga tgaagtgcgc gcctttcagt gcggattcgg
    12241 agaacaggat gccgttgttg gcgatgatgc cgatcgggta gccgttcaga tgcgcgaagc
    12301 cggtcaccag cgtggcgccg tagcgcggct tgaactcgtc gaagcgcgag ccatcgacca
    12361 gccgcgcgat cacttcgcgc acgtcgtagg gcttgcgcgt gtccgcggga atcacgccgt
    12421 acagttcgtg cgccggcagc agcggttctt cactggccag caccgccatc gccggttccg
    12481 gcttgcgcca gttcaactgc gcgatgatcg cgcgcacccg tgccagcgcc tgcagatcgt
    12541 tgtcggccat gtggtcggcc acgccggaaa tgcgcgtgtg cacatcggcc ccgcccagtt
    12601 cctcggcggt caccacttcg ccggtggcgg ccttcaccag cggcgggccg cccaggaaga
    12661 tcgttccctg ttcgcgcacg atcaccgtct cgtcgctcat cgccggcacg taggcgccac
    12721 cggcggtgca gctgcccatc acgcaggcga tctgcggaat gccctgcgcc gacaggttgg
    12781 cctggttgta gaagatgcgg ccgaaatggt cgcggtcggg gaacacctcg tcctgcagcg
    12841 gcaggaacgc accaccggaa tcgaccaggt agatgcacgg caggtggttc tgctcggcga
    12901 tctcctgcgc gcgcaggtgc ttcttcaccg tcatcgggta gtaggtgccg cccttgaccg
    12961 tggcgtcgtt ggccacgatc acgcattcca cgccactgac ccggccgatg ccggccacca
    13021 cgccggcagc gggcacggca tcgtcataca tgccgtgcgc ggccagcggc gcgatctcca
    13081 ggaaggcgct gccggggtcg agcagagcat cgatgcggtc gcgcaccagc agcttgccgc
    13141 gggcggtgtg cttggcacgc gcggcctcgt tgccacccag cgcggtgcgg gcgagggtgg
    13201 catgcaggtc atcgaccacg gcctgcatgg ccgtgcggtt ggcttcaaac gtttcgctgc
    13261 ctggttgcag ctggctgttc aggacggtca tcgcggtggc cttacagggt gcgctggaac
    13321 agttcgcggc cgatcagcat gcggcggatc tccgaggtgc cggcgccgat ttcatacagc
    13381 ttggcgtcgc gccacaagcg gccggtcggg tactcgttga tgtagccgtt gccgcccagg
    13441 atctggatcg cctggccggt cagccaggta gccttctcgg cggcgtacag gatggcaccg
    13501 gccgcgtcct ggcgggtggt acggccctgg tcgcaggcgc gcgccacggc atagacatag
    13561 gcgcggcagg cgcccaggcc cacatacatg tcggcgatct tggcctggat cagctggaag
    13621 ctgccgatcg gctcgccgaa ctggtggcgc tcgtgcacgt acggcatcac cacgtccatg
    13681 gccgcggcca tcaggcccag cgggccaccg gaaaggacca cgcgctcgta gtccaggccg
    13741 gacatcagca cgcgcacgcc gccaccgacc tggcccagca cgttctcttc gggaatctcg
    13801 cagtcctgga acaccagctc gcaggtgggc gaggagcgca tgcccagctt gtccagcttc
    13861 tgcgcggtgg agaagccctt catgcccttc tcgaccagga acgcggtgat gcccttggca
    13921 ccggcctcga tgtcggtctt ggcatagacc accagcacgt cggcgtccgg gccgttggtg
    13981 atccacatct tgttgccgtt gagcacgtag cggtcgccac gcttgtcggc gcgcagcttc
    14041 atcgacacca cgtccgaacc ggcacccggc tcgctcatcg ccagcgcgcc gaccagactg
    14101 ccgttgcaca ggccgggcag gaagcgctgc ttctgttctt cgctgccgtt cttgcgcagc
    14161 tggttcacgc acaggttgga gtgcgcgccg taggacaggc cgatgccgcc agaggcgcgc
    14221 gagatttctt ccatcgccac cacgtgggcc aggtagccca tgccggtgcc gccgtattct
    14281 tcttccacgg tcaggcccag caggccctgt tcgcccagct tcggccatag tgccaacggg
    14341 aactggttgg ttgcgtcggc ctcggcggcc agcggcgcga cctcggcggc ggcaaaatgg
    14401 gccacgctct ggcgcagcag gtcgatatct tcgccaagat cgaagttcag ggatggcacg
    14461 tgcattgcgg tggctccacg gcgggactgc agggaatgga cgcacccggc gggggagcgg
    14521 gcgacggccg gcagggccgt cacccgcacg ggcgatggac cccagcgtaa cggggttcgg
    14581 gaaagaagtg aacacaaatt caaaaattga aactagaatc aaaacatggc ctacaaacgc
    14641 tctgcactga tggaagaacg cctggccggg gcccgtgaac ggatcctgct ggccacccgc
    14701 gagctggtcg ccgcaggcgg ctggcgcaac gccccggtaa ccgccgtggc gacccaggcg
    14761 ggggtgtcca ccgggttgat ctaccggcac ttcccgtcca aggccgacct gttcgtggag
    14821 gtgctcaacg ccgccgtggc ccacgaggtg gcgatcatgg agcgcattgc cagcggcccg
    14881 gaggtagcca gcgagcgcct gcgcctggcg atcaccgcct tcgtccgccg cgccctggcc
    14941 gggccggggc tggcccatgc cttcatcgtc gagccggtcg acccggacgt ggaagccgag
    15001 cgcatgcgcg gccgccgcgc ctttggtgac gtgttcctgc gcctggtgga agagggcgtg
    15061 gcagccggtg agctgccggt gcaggacgcg cacgtggccg ccgcctgcct ggtcggcgcc
    15121 ttcaccgagg cgatggtcgg cccgaccgca cccagccgcg aagcgcaccg cgacgaggat
    15181 gcactggtgg atgcgatctg cagcttctgc ctgcgcgcga tcggcgcccg gtaatccggt
    15241 agagccggcc gctggccggc ttccgcacga tgtctccggt gagatggcga tgccggccac
    15301 gcatgttgcg ccgcaccagc cctgaagcct gttgtcgcac gcgaagcgcg ttctatactc
    15361 ggtccatcac gcagtcgctc agccgtggtc caacgactat cagccagggg taacgaagag
    15421 tgcggaatta cgatctggag ttcctgaaac gcttctccat ggtgatcgcg ctgctggcga
    15481 ccatcaccct cggcctcatc ctccttgctg cctatatcca cacccggatt ccgccggagg
    15541 tgtcgccgac cgcggccaag cgcaccgagc agcgcatttc gcccaccggc gcggtctatg
    15601 ccggcagcac cggcgccgcc gcgcaggcag cggccaaggc tgccgcgctg gccaaggccg
    15661 cctcgcaggt cgcctacggc ggcaccaagg acggcaaggt catcttcgac aacctctgca
    15721 ccgcctgcca caccaccggc gtgggcatgg caccgacgct ggaccactcg cactgggaca
    15781 agcgcatcgc gcagggcaag gacaccctct acaagcacgc catcgagggc tacaccggcc
    15841 cggacggcgg catcatgccg cccaagggcg gcaacccggc gctgaccgag gaacagatcc
    15901 acgccaccgt ggactggatg ctgggtaacc tg
//
LOCUS       DAOKIP010000084        15872 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.084,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000084 DAOKIP010000000
VERSION     DAOKIP010000084.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 15872)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15872)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15872
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.084"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            299..3442
                     /locus_tag="QEL58_002197"
     CDS             299..3442
                     /locus_tag="QEL58_002197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019338513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDS1676658.1"
                     /translation="MGMKHSTRTHGQDALSLAIALALAAAVVPAGAAAQQAASTGSQD
                     ATNLDSVQVTGYRYAIEKSLEQKRDANAVVEVITAEDVGKFPDKNVADALQRVPGVII
                     TRSGGEGKNVSVRGLASDLTLTQLNGNYVATSETNDEASRSFNYTLLPSNMLSAAELY
                     KTPEARIDEGGIGGTVILRTRRPLDMKANSGFASMEGTSSDTSSGVDPQASAMYSWHS
                     EDERFGLLIGATKQVRTNRSMEVSTEDWQWYSDRVDANGAVIHDYVWNAPGRTRNPAV
                     DVHGNALPDASQFWGRSGIYNQNGGHYSGFFMPTSVNFAVRDERRERTGGQLTFQFKP
                     LDNVTMTANYFRFELQGDYTQNMLKVPEWNLARVAGDGNWEGGRMLNGFTMDPSGTIV
                     TGAQYQMQPGRNYICSEDQAKAAGLPPGGWGPDDCTIPTPQLTGTYSKEKALSQTADL
                     TIDWDISPLWKASFAGGRTWSEGGPSMNFRMSAKPRRQVDGQWQAGNTATSWDLAGTP
                     SVNFSPDLQQQLMAGIAEVDTGSTDSSWKRTEVKQNHFQADVTKLFEAGWLDSIQFGA
                     KYSDGKVHRNTGNTYWVCQGADPSDYSKRYQAGCDSTAGIAQPGFFLSQPMGNIAGAF
                     NANVFPGINYPAYIDYLNNRYGGVQNRTEDDFVYDVQEKVYSGYFQANFRTERLRGNI
                     GVRVARTKQHAASSDSVERFNDYFADNAAGSPLACTDPSAAALLGSNAGYGCESGFVR
                     LPDSMARVKTYELASLDKTYTDFLPSFNIAWDITDSLVLRGAASKVIARPSYTNIAYP
                     GGLSYYSDEYSNDRRVAGGAVNPGWYGSGSNKELEPFKATQYDLSLEWYFKPGAVAGI
                     GVFRKDVKNFTVPVVRDQQMNVGGQSVTVQKYETQANGRDGVSQGVEIYGQYTLDFGL
                     GFQANYTYNDTNLASVEINGEQIGSSPLVGSAKNQANFTMFYENEKFLARASYNRRGV
                     VVGGLNNGFSSYSEPYDQLDLNAAYNIREDLALTASVLNVTKSEQRVHLGNDTKARLL
                     SNTYSGRQYYVGLTWKF"
     gene            3627..3821
                     /locus_tag="QEL58_002198"
     CDS             3627..3821
                     /locus_tag="QEL58_002198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy-metal-associated domain-containing
                     protein"
                     /protein_id="HDS1676659.1"
                     /translation="MEFHVDGMTCGGCARSVTRAIQQIDPNASVVADPPTGLVKVQTT
                     ASQEQVFAAVNDAGFPPRTP"
     gene            complement(3901..4356)
                     /gene="cueR"
                     /locus_tag="QEL58_002199"
     CDS             complement(3901..4356)
                     /gene="cueR"
                     /locus_tag="QEL58_002199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001020583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cu(I)-responsive transcriptional regulator"
                     /protein_id="HDS1676660.1"
                     /translation="MNIGQAAKASSVSAKMIRYYEQIGLIPAADRTESGYRAYSQADI
                     HRLRFIRRARDLGFQVAEITDLLGLWNDTSRHSADVKRLAEQHIADLEQRIESMRQMA
                     DTLKSLISCCAGDERPECPILQRLGDGDELPVPVDAAKTGAVRRRAHKH"
     gene            complement(4370..6871)
                     /gene="cadA"
                     /locus_tag="QEL58_002200"
     CDS             complement(4370..6871)
                     /gene="cadA"
                     /locus_tag="QEL58_002200"
                     /EC_number="7.2.2.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012480044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cadmium-translocating P-type ATPase"
                     /protein_id="HDS1676661.1"
                     /translation="MSTPRATAAPASLPTISLPIEGMTCASCVGRVEAALSKVEGVGS
                     VSVNLATERADIRASGPVDRAALIQAVERVGYDVPAATLELAVEGMTCASCVGRVERA
                     LRAVPGVSEASVNLATERATVRGVADVGALVAAIDRVGYAAHAIEAGVQADDEATEKK
                     DAERAQLKRDLIVAAALALPVFVLEMGSHLIPGMHGWVMATLGMQASWYLQFVLTLLV
                     LAIPGRRFYQKGFPALLRLAPDMNSLVAVGTAAAFGYSVVATFAPRLLPAGTVNVYYE
                     AAAVIVALILLGRFLEARAKGRTSEAIKRLVNLQAKVAHVIRDGRTIEIPVNELLSGD
                     VVEVRPGERVPVDGEVVEGRSYIDESMISGEPIPVEKQPGSSVVTGTVNQKGALTVRA
                     TAVGAQTMLAQIIRMVEQAQGSKLPIQAVVDKVTLWFVPAVMLAALATFLVWLIFGPS
                     PALSFALVNAVAVLIIACPCAMGLATPTSIMVGTGRGAEMGVLFRKGEALQLLKDAQV
                     VAVDKTGTLTEGRPRLTDLEIADGFDRSTVLAAVAAVESRSEHPIARAIVDAATGQGI
                     ALSTLLDFESVTGMGVRARVDGARVEVGADRFMRDLGVDITAFSTLAADLGTQGKSPL
                     YAAIDGRLAAIIAVSDPIKPSTPAAIAALHQLGLKVAMITGDNAGTAQAIARQLGIDE
                     VVAEVLPEGKVEAVRRLKATHGHVAFVGDGINDAPALAEADVGLAIGTGTDIAVESAD
                     VVLMSGNLQGVPNAIALSKATLGNIRQNLFWAFAYNTALIPVAAGVLYPVWGVLLSPV
                     FAAGAMALSSVFVLGNALRLRRFQAPMADAPAATH"
     gene            complement(7023..9980)
                     /locus_tag="QEL58_002201"
     CDS             complement(7023..9980)
                     /locus_tag="QEL58_002201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005416339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDS1676662.1"
                     /translation="MAQSVRKRRHLLSQALVLALLPLAASAQESSSSSTKDLDAVTVT
                     GSRIKRASVEGPAPVNVITAAQIQKEGFVSVYDALKTLTEATGTVEAASQWGSHTPNA
                     SGLNLRGMGPNRSLLLVNGRRVADYPLPYGGETNFSNYGNIPAAAVERIEVLTGGASA
                     IYGSDAIAGVVNVILKTNYDGDEVRVRGGTSTEGGRDTWDLSWAGGKTGDNWSVTYAL
                     QYTKRDPLFGRDRPQMDDADDAPYPSWNMEQRKVGFRPTAGLALIDPTTGQRLAPPAG
                     TCEKFNGEYYTADRLVYNYAANTITNTGRLCGMSADYANWLLTGGAENVSGNLYATFD
                     FSNDLQAWTNLAVYRSEAIWGTNPPGVSLIDDDNGYYWDANRNRPILGVRQFTPNEVG
                     GLDTLRNTNRELSWDWSAGLRGRLADRFDWSATVGRSYYRVEERQNVVDKQKSYDYFL
                     GPRLGTTAGGEAIYALNESRWWNPLTPDQYWQMGTVAKNRASSWVNQASADITGELVQ
                     GWAGPISFAAVAEVAQQGYHLSPDPRAGIDFDLQNVDRGGGERTRYSAGIEFKIPLLD
                     SVIATAAARYDRYGSYKADDSAEALNIGSQKETTWNVGLEWRPVESLLVRGSYATSFH
                     APDMHYLLGQPSSSEVQTYDRLRCIQSGAYLVNNCGVGNTDVWYTFDVNRRGTPLLRS
                     ETGDSWTVGFVWDVMPNLSVSADYWAIKLEDMIVDVGADEVLASEAGCLTGKNMDGTP
                     WANPAGGEYCAGILARVNRDSNGRLVSIERGPFNLASREVRGIDLTARYRLETAQWGS
                     FQLGVNYTNQISTKEQRYAADPNPERRDRDLRSKLRASLAWQRGNWNANVYADRIGSV
                     PGVRYHWGTDRLDNPGGCLPFADGYVPSDSPSLNCLEPATRPDGSPNPNPNAGQQTSR
                     YYGRVGPFITWNFNVGYQMTERAKVNVYVNNAFNSASWNHKDPYKLDYDFAPTRLLGA
                     VGREFALEYVFTF"
     gene            complement(10278..10820)
                     /locus_tag="QEL58_002202"
     CDS             complement(10278..10820)
                     /locus_tag="QEL58_002202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676663.1"
                     /translation="MPRLLLLFLCLLPAAVTAAEEGQSPVLIWRAAGPEGNRIDAVLD
                     GVTLTPAAKGAFVDTRIHLIGNRRFRAVYQVFDSNADNPMGPCGAGREIQLFVYELIP
                     PKPVERGKMLISSCLETVSLASQNSGSSESESDFSSVVWQNDGFTIKWWGAGPDGKAS
                     SRYALRNGRFVPAQSSDRSR"
     gene            complement(11033..11764)
                     /locus_tag="QEL58_002203"
     CDS             complement(11033..11764)
                     /locus_tag="QEL58_002203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005413174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper homeostasis protein CutC"
                     /protein_id="HDS1676664.1"
                     /translation="MSTRLSLEIASNSLASALAAQAGGADRIELFDNLAEGGTTPSFA
                     SIAIARERLSIPLFVLVRPRAGDFHYDALETELMLRDIAQCRALGCDGVVIGALDVQG
                     GIDLALCRELVQAAGPLQVTFHRAFDAARDLPAALEQVIGLGCQRVLTSGGQVSAEAG
                     AEVLAGLVTQAAGRITVMAGAGLAPGNIAGVARRSGCTELHASAKGLRRSAMQFHNPA
                     LRGLDPDWSQTATATVAALRQALDG"
     gene            complement(11761..12759)
                     /locus_tag="QEL58_002204"
     CDS             complement(11761..12759)
                     /locus_tag="QEL58_002204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase"
                     /protein_id="HDS1676665.1"
                     /translation="MVDRRQFLQAGALAASMAALPGVQARTQGGAKVVSTWDFGVPAN
                     QAAWKVLAQGGSALDAVEAGARWAESELCNPTVGHCGNPDRDGVLSLDASIMDGDGRC
                     GAVAALVDILHPVSVARKVMENSPHVLLVGDGAQQFAMQQGFERRHLLTPQAEAAWRE
                     WLKTEKYQPQINAERRGIPGNSDNHDTIGMLALDAKGHLAGACTTSGMAWKLHGRVGD
                     SPIIGAGLYVDNEVGAATASGVGEEMIRNAASFLVVELMRQGRSPAQACREAIDRVVR
                     RRPEASRTLQVCFLAMNKQGEVGAYALHRGFVYAVCDAQRQDDLRDSPSIYTSTQA"
     gene            complement(12811..13833)
                     /locus_tag="QEL58_002205"
     CDS             complement(12811..13833)
                     /locus_tag="QEL58_002205"
                     /EC_number="2.7.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014646956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucokinase"
                     /protein_id="HDS1676666.1"
                     /translation="MTIAAASPVSTDSARGGLPRRLVVADVGGTFARLALAETLAGQP
                     PRLGSHRTYACAEYPSLAAILADFTSGLGQPVKTAVVAIAGLLDGDVLINSNLPWTVS
                     LSATRAQSALHELQLINDFEAVALAIPYLQPETLVPLNGDADPAQAFPALVLGAGTGL
                     GAALRFADGERPVLASEIGHAALGAGNALELQVLGKLLQRWPHVDNERVLSGSGLMNL
                     YPCLCELRGATPVWTSTEALIGAARSGEDALAVETLQVFCAWLGSLAGDAAIAVGARS
                     VYLAGGISAHVQDFLADGRFRARFLNKGVLSEVLRQVPVWRVEHGQLGVLGAAVWHAA
                     RQPTHD"
     gene            complement(13918..14202)
                     /locus_tag="QEL58_002206"
     CDS             complement(13918..14202)
                     /locus_tag="QEL58_002206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012480039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676667.1"
                     /translation="MDIRFMAGTTPVTLSRHWFTGAMLLQSATEKVWVQHPWHPGTHF
                     SFSLVQSWLRHIAGHEVLVERTRPLLFAGFRPQRLRVLVDGVQVAEQEGM"
     gene            complement(14238..15827)
                     /locus_tag="QEL58_002207"
     CDS             complement(14238..15827)
                     /locus_tag="QEL58_002207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="calcineurin-like phosphoesterase family protein"
                     /protein_id="HDS1676668.1"
                     /translation="MKLPAAWLCCLLLTSPAWAADTVVSGKVYLERDGKPGRGATDPG
                     LAGVQVSNGETIVKTAADGSYSLPVRDGQTVFVIKPDAYAFPKAADGLPSFWRHYRPN
                     GSPALKYGGIAATSDVTRNWDFALQADRHDSRRGFQMLVFTDSQTASLKDIGYYQQSI
                     VAPLVGQTKARMGTTLGDIVNDDLALYPAINKVTTSLGVPWFHVPGNHDLDFDAASDA
                     HSLDSWRNVYGPDTYAVEEGGASFVFLDDVVYDPKAKPKYVGGLREDQFTFLASYLKG
                     LHKDRLLVLGMHIPLFDAAPGRETFRHADRQRLFDLLKDFRNVLVLSGHSHTQQHVYH
                     GRAEGWNGDKPLHEYNVGANCGAFWSGVKNAAGVPDSTMSDGTPKGYALLDVAGNGSY
                     RLQYRVAGKPASEQIGLHAPKVLRQGAYPAWGIYANVYMGEDTSVVEYRVDGGAWQPM
                     KQVSQPDPRLMVENVADDLAVTLRGYDRSPEATASPHLWRGALPTDLSVGSHKVEVRS
                     TQPDGAVFTATTSYSLQTAQP"
BASE COUNT         2761 a         5407 c         5084 g         2620 t
ORIGIN      
        1 cgcacgaaaa cgtttccact gttttcagca aaccgtcatc ccttcgccac gccagtacca
       61 tattgcgcag cagcatgcgc ccgcgggcga cccatgctaa aaaacgcccg cccatcgctt
      121 agatcgatcc aagacgacat tgcgatggcc gggagttggg gaagcagtca caggacgtac
      181 caggccatgc gcacggtgct actgccactg catggcgata gcgacaatgt cacttcaaat
      241 tagatcgatt caagttgtcc gtgccacgtc accggatcaa tccaggagag agggagagat
      301 gggaatgaag cattcaacac gcacgcacgg ccaggacgca ttgtcactgg ccatcgcgct
      361 ggccctggcc gccgccgtcg ttccggccgg cgccgccgcg cagcaggccg cttccaccgg
      421 ctcgcaggac gccaccaatc tggacagcgt ccaggtcacc ggctaccgct acgccatcga
      481 gaagagcctc gaacagaaac gcgacgccaa cgccgtggtc gaagtgatca ccgccgagga
      541 cgtcggcaag ttccccgaca agaacgtcgc cgacgcacta cagcgcgtgc ccggcgtgat
      601 catcacccgc agcggcggtg aaggtaagaa cgtcagcgtg cgtggcctcg cctcggatct
      661 gaccctgacc cagttgaacg gcaactacgt cgccacctcg gaaaccaacg acgaagcatc
      721 gcgttcgttc aactacaccc tgctgccctc gaacatgctg tcggcggcgg agctgtacaa
      781 gaccccggaa gcacgcatcg acgaaggcgg catcggtggt accgtcatcc tgcgtacccg
      841 ccgcccgctg gacatgaagg ccaactcggg ttttgcctcg atggaaggca cctcgtccga
      901 caccagcagc ggtgtcgacc cgcaggcgtc ggcgatgtac tcctggcaca gcgaggatga
      961 gcgtttcggc ctgctgatcg gtgcgaccaa gcaggtccgc accaaccgca gcatggaagt
     1021 cagcactgaa gactggcagt ggtacagcga ccgtgtggac gccaacggcg ccgtcatcca
     1081 tgactatgtc tggaacgctc ccggccgcac ccgcaatccg gccgtggacg tccatggcaa
     1141 cgcgctgccg gacgcctcgc agttctgggg ccgctcgggc atctacaacc agaacggcgg
     1201 ccattactcc ggcttcttca tgccgacctc ggtcaacttc gccgtgcgtg atgagcgccg
     1261 cgagcgtacc ggcgggcagc tgacgttcca gttcaagccg ctcgacaatg tcacgatgac
     1321 ggccaactac ttccggttcg agctgcaggg tgactacacc cagaacatgc tgaaggttcc
     1381 ggaatggaac ctggctcgcg tggccggcga cggcaactgg gaaggtggcc gcatgctcaa
     1441 cggcttcacc atggacccga gtggcaccat cgtgaccggc gctcagtacc agatgcagcc
     1501 gggccgcaac tacatctgca gcgaagacca ggcaaaggcc gccggtctgc caccgggtgg
     1561 ctggggtccg gatgactgca ccatccccac cccgcagctg accggcacct acagcaagga
     1621 aaaggcgctg tcgcagaccg ccgacctgac catcgattgg gacatcagcc cgctgtggaa
     1681 ggccagcttt gccggtggcc ggacctggtc ggaaggcggc ccgtcgatga acttccgcat
     1741 gtcggccaaa ccgcgccgcc aggtcgatgg ccagtggcag gcaggcaaca ccgccacctc
     1801 ctgggacctg gccggcacgc cgtcggtgaa cttctcgccc gacctgcagc aacagctgat
     1861 ggccggcatt gccgaagtgg acaccggctc caccgactcg tcgtggaagc gcaccgaggt
     1921 caagcagaac cacttccagg ccgatgtcac caagctgttc gaagccggtt ggctggattc
     1981 aatccagttc ggggccaagt acagcgacgg caaggtccat cgcaacactg gcaacaccta
     2041 ctgggtctgc caaggcgcgg acccgagcga ctacagcaag cgctaccagg ccggttgtga
     2101 ttccaccgcg ggcatcgcac agccgggctt cttcctgtcg cagccgatgg gcaatatcgc
     2161 cggtgcgttc aatgccaatg tgttcccggg catcaactac ccggcctaca tcgattatct
     2221 gaacaaccgc tacggcggcg tgcagaaccg caccgaggac gacttcgtct acgacgtgca
     2281 ggaaaaagtg tactcgggct acttccaggc gaacttccgc accgagcgcc tgcgcggcaa
     2341 catcggcgtg cgcgtcgcac ggaccaagca gcatgccgcc tccagcgatt cggtcgagcg
     2401 cttcaacgac tatttcgctg acaacgcggc cggttcgccg ctggcgtgca ccgatccctc
     2461 ggcggccgcg ctgctcggct cgaacgctgg ctatggttgc gaaagcggct tcgtgcgcct
     2521 gcccgacagc atggcccggg tgaagaccta cgagctggca tccctggaca agacctatac
     2581 cgacttcctg ccgagcttca acatcgcctg ggacatcacc gattcgctgg tgctgcgcgg
     2641 tgcagcgtcg aaggtcatcg cccgccccag ctacaccaac atcgcctatc caggcggcct
     2701 gagctactac tccgatgagt acagcaatga tcgtcgcgtt gctggcggcg ccgtcaaccc
     2761 gggctggtat ggttcgggga gcaacaagga actggaaccg ttcaaggcga cccagtacga
     2821 cctgagcctg gagtggtact tcaagccggg cgccgtcgcc ggtatcggcg tgttccgcaa
     2881 ggacgtcaag aacttcaccg tgccggtggt acgcgaccag cagatgaacg tcggcggcca
     2941 gagcgtgacc gtgcagaagt acgagaccca ggccaacggc cgcgatggcg tgtcgcaggg
     3001 cgtggaaatc tacggccagt acaccctcga cttcggcctc ggcttccagg ccaactacac
     3061 ctacaacgac accaacctgg cgtcggtgga gatcaacggc gaacagatcg gttcttcgcc
     3121 gctggtaggc agtgccaaga accaggccaa cttcaccatg ttctacgaga acgagaagtt
     3181 cctggcgcgt gcctcgtaca accgccgtgg cgtggtggtc ggtggtctca acaatggctt
     3241 cagctcctac tccgagccgt acgaccagct ggatctgaat gccgcgtaca acatccgcga
     3301 ggatctggcg ctgaccgcgt cggtactcaa cgtcaccaag tccgagcagc gcgtgcatct
     3361 gggcaacgac accaaggccc gcctgctgtc gaacacctac tccggccgcc agtactacgt
     3421 cggcctgacc tggaagttct aagccaacac cgggttgccc gggcctgccc cggcgcaatc
     3481 cacgccccgc tccggcgggg acgttcctcc acggcagccg cgctggtaca ggtggctgcc
     3541 gttttcactt cagcccagcg cttgaccctg ccatcgttgg aaggtgcaca ctggctccac
     3601 ccccaagagc accgaaggag ctacagatgg aattccatgt cgacggcatg acctgcggtg
     3661 gctgcgcacg cagcgtgacc cgcgccatcc agcagatcga tccgaatgcc agcgtggtcg
     3721 ccgatccgcc gaccggcctg gtcaaggtgc agaccaccgc atcgcaggag caggtcttcg
     3781 ccgcagtgaa cgatgccggt ttcccgccgc gtactccctg acctgccacc ctgccccgca
     3841 acaccaggcc caccgggtgc aactgcaccc ggcgggcttt ttcatgcatg cggtgtgggt
     3901 tcaatgcttg tgcgcgcgcc gccgcaccgc gccggtcttc gctgcatcga ccggcaccgg
     3961 caactcgtcg ccgtcaccca gccgctgcag gatcgggcac tccgggcgct cgtcacccgc
     4021 gcagcagctg atcagcgact tcagcgtgtc ggccatctgc cgcatgcttt cgatacgctg
     4081 ttccaggtcg gcaatgtgct gctcggccag gcgcttgacg tcggcactgt gccgcgaggt
     4141 gtcgttccac aggcccagca ggtcggtgat ctcggccacc tggaagccaa gatcgcgggc
     4201 gcggcggatg aaacgcaggc ggtggatgtc cgcctgcgaa tatgcgcgat agcccgactc
     4261 ggtgcgatcg gccgcgggaa tcagcccgat ctgctcgtag tagcggatca tcttcgccga
     4321 aacactggag gccttggcag cttgaccgat gttcatgcgg ttctctcctt caatgggtcg
     4381 cggcgggggc gtccgccatc ggcgcctgga agcggcgcag gcgcagcgcg ttgcccagca
     4441 cgaacacgct ggacaaggcc atggcaccgg ccgcgaacac cggcgacagc agcacgcccc
     4501 agaccgggta cagcacacct gccgcgaccg ggatcagcgc ggtgttgtag gcgaaggccc
     4561 agaacaggtt ctgccggatg ttgcccagcg ttgccttcga cagcgcaatg gcattcggca
     4621 cgccctgcag gttgcccgac atcagcacca catcggccga ctccaccgcg atgtcggtgc
     4681 cggtaccgat cgccaggccg acatcggcct cggccagcgc cggtgcatcg ttgatgccgt
     4741 cgccgacgaa ggcgacgtgc ccatgcgtgg ccttgagccg gcgcaccgct tcgaccttgc
     4801 cttccggcag cacctcggcc accacctcat caatgcccag ctggcgtgcg atggcctgcg
     4861 cggtaccggc attgtcgccg gtgatcatcg ccaccttcag gcccagctgg tgcaacgccg
     4921 cgattgcggc cggcgtgctc ggcttgatcg ggtcggatac cgcgatgatc gccgccaggc
     4981 gtccatcgat ggctgcatac agcggcgact tgccctgcgt gccgaggtcc gccgccagcg
     5041 tcgagaacgc ggtgatgtcc acgccaagat cgcgcatgaa gcgatcagca ccgacctcga
     5101 cccgggctcc atcgacacgg gcgcgcacgc ccatgccggt gaccgattcg aagtcgagca
     5161 gggtcgacag cgcaatgccc tgcccggtcg ccgcatcaac aatggcacgg gcaatcgggt
     5221 gctccgagcg tgactccact gccgccaccg ctgccagcac cgtgctgcga tcgaaaccgt
     5281 cggcgatctc gagatcggtc aatcgcggac gcccttcggt cagcgtaccg gtcttgtcca
     5341 ccgcaaccac ctgcgcatcc ttcagcaact gcagcgcttc acccttgcgg aacagcacac
     5401 ccatctcggc gccacgaccg gtaccgacca tgatcgatgt cggcgtggcc agccccatcg
     5461 cacaggggca ggcgatgatc agtaccgcta cggcattgac cagcgcgaaa ctcagcgccg
     5521 gcgacgggcc gaagatcaac cagaccagga aggtcgccag tgcggccagc atcactgccg
     5581 gcacgaacca cagcgtgacc ttgtcgacca ctgcctggat cggcagcttc gagccctgcg
     5641 cctgctcgac catgcggatg atctgcgcca gcatggtctg cgcgcctacc gccgtggccc
     5701 gcacggtcag cgcccccttc tggttgacgg tgccggtgac cacgctgctg cccggctgct
     5761 tctccaccgg aatcggctcg ccgctgatca tcgactcgtc gatatagctg cggccctcga
     5821 ccacctcgcc atcgaccggc acgcgctcgc ccggacgtac ctccaccaca tcgccgctca
     5881 gcagctcgtt gaccgggatc tcgatcgtgc gaccgtcacg gatcacatgc gcgaccttgg
     5941 cctgcaggtt gaccaggcgc ttgatcgcct cggacgtgcg gcccttggcg cgcgcctcaa
     6001 ggaagcggcc gagcaggatc agcgcgacga tcaccgccgc ggcttcgtag tagacgttca
     6061 ccgtgcccgc cggcaacagc ctcggcgcga aggtcgccac caccgagtag ccgaatgcgg
     6121 cagcggtgcc caccgccacc agtgagttca tgtccggcgc aagccgcagc agtgccggga
     6181 aacccttctg gtagaaacgg cggccgggaa tggccagcac cagcagggtc agtacgaact
     6241 gcaggtacca gctggcctgc atgccgaggg tggccatcac ccagccgtgc atgccgggaa
     6301 tcaggtgcga gcccatttcc agcacgaaca ccggcagcgc cagcgcggcg gccacgatca
     6361 ggtcgcgctt cagttgcgcg cgctcggcgt ccttcttttc cgtcgcttcg tcatccgctt
     6421 gaaccccagc ctcgatggca tgggcggcat agccgaccct gtcgatggcc gccaccagcg
     6481 cgcccacgtc ggccacgcca cgcaccgtgg cgcgctcggt ggccaggttc acgctggctt
     6541 cgctgacgcc gggcaccgcc cgcagcgcgc gctcgacacg accgacgcag gacgcgcagg
     6601 tcataccctc caccgccagc tcaagggtcg cagcgggtac gtcgtagccc acccgctcca
     6661 ccgcctggat cagcgcggcg cgatcgaccg gaccggacgc acggatgtcc gcacgttcgg
     6721 tggccaggtt gaccgagacg ctgcccacgc cctcgacctt ggacagtgcc gcttcgaccc
     6781 ggcccacgca gctggcgcag gtcatgccct cgatgggcag gctgatggtg ggcaggctgg
     6841 cgggggctgc ggtggcgcgg ggtgtactca tgatcggatt cccatggatt ccttctggat
     6901 gcggacaggc taaaccttgc catcgtggga aggtcaaatc cagcctgtcc gcatttcctg
     6961 aatgggcatc caggtgtccg catccacgca tggcgtggat ctactgacga tgggtggtct
     7021 cgtcagaagg tgaacacata ctccagtgcg aattcgcggc cgaccgcacc gagcaggcgg
     7081 gtcggggcga agtcgtagtc cagcttgtac gggtccttgt ggttccagct ggccgaattg
     7141 aacgcgttgt tgacgtagac attgaccttg gcgcgttcgg tcatctggta acccacgttg
     7201 aagttccagg tgatgaacgg cccgacccgg ccgtagtagc gcgaggtctg ctggccggcg
     7261 ttcgggttcg gattgggcga gccgtccggt cgggtcgccg gctccaggca gttcagcgac
     7321 gggctgtcac tgggcacgta accatcggcg aacggcaggc agccgccggg gttgtccagg
     7381 cggtcggtac cccagtggta gcgcacgccc ggcaccgaac cgatgcggtc ggcatagaca
     7441 ttggcgttcc agttgccacg ctgccaggcc aggcttgcgc gcagcttgct gcgcaggtcg
     7501 cggtcgcggc gttccgggtt cgggtcggcg gcgtagcgct gttccttggt cgagatctgg
     7561 ttggtgtagt tcacgcccag ctggaagctg ccccactgcg cggtctccag gcggtagcgc
     7621 gcggtcaggt cgatgccgcg tacctcgcgg ctggccaggt tgaacgggcc acgctcgatc
     7681 gacaccaggc gtccgttgct gtcacggttc acgcgcgcca ggatgcccgc gcagtactcg
     7741 ccgccggccg gattggccca cggcgtgccg tccatgttct tgccggtcag gcagccggcc
     7801 tcactggcca gcacttcgtc ggcaccgacg tcgacgatca tgtcttccag cttgatcgcc
     7861 cagtagtcgg cgctgaccga caggttcggc atcacgtccc agacgaagcc gaccgtccac
     7921 gaatcaccgg tttccgagcg cagcagcggc gtgccgcgcc ggttcacatc gaacgtgtac
     7981 cagacgtcgg tgttgcccac gccgcagttg ttgaccaggt aagcaccgct ctggatgcag
     8041 cgcaggcggt cataggtctg cacttcggaa ctgctcggct ggcccagcag gtagtgcatg
     8101 tccggcgcgt ggaaactggt ggcatacgag cctcgcacca gcagcgattc gaccgggcgc
     8161 cattccagcc cgacgttcca ggtggtttcc ttctggctgc cgatgttcag ggcctcggcg
     8221 ctgtcgtcgg ccttgtagct gccatagcgg tcatagcgcg ccgccgcggt ggcgatcacg
     8281 ctgtccagca gcgggatctt gaactcgatg ccggctgagt agcgcgtgcg ctcgccgcca
     8341 ccgcggtcga cgttctgcag gtcgaagtcg atgccggcgc gtggatcagg actgaggtga
     8401 taaccctgct gcgccacttc ggccacggcg gcgaacgaaa tcgggccggc ccagccctgg
     8461 accagttcac cggtgatgtc cgccgaggcc tggttgaccc acgagctggc gcgattcttc
     8521 gccacggtcc ccatctgcca gtactgatcc ggcgtcagcg gattccacca gcgcgattcg
     8581 ttcaacgcat agatcgcttc acccccggcg gtggtgccca gacgtgggcc gaggaagtag
     8641 tcgtaggact tctgcttgtc caccacgttc tgccgttctt ccacgcggta gtacgagcgc
     8701 cccaccgtcg cactccagtc gaagcggtcg gcgaggcgcc cacgcaggcc ggcgctccag
     8761 tcccaggaca gttcgcggtt ggtattgcgc agcgtatcca ggccacccac ttcgttcggg
     8821 gtgaactggc gcacgccgag gatcgggcga ttgcggttgg catcccagta gtagccgttg
     8881 tcatcgtcga tcagcgacac gccgggcgga ttggtgcccc agatcgcctc ggagcgatac
     8941 accgccaggt tggtccaggc ctgcaggtca ttgctgaaat cgaaggtggc atacaaattg
     9001 ccggatacat tctcggcgcc gcccgtgagc agccagttgg catagtcggc actcatgccg
     9061 cacaggcggc cggtgttggt gatggtgttg gcggcgtagt tgtagaccag gcgatcggcg
     9121 gtgtagtact cgccgttgaa cttctcgcag gtgcctgccg gcggcgccag gcgctggccg
     9181 gtggtggggt cgatcagcgc caggccagcg gtgggacgga agccgacctt gcgctgctcc
     9241 atgttccagg acgggtacgg cgcatcatcg gcatcgtcca tctgcgggcg atcgcggccg
     9301 aacaacggat cgcgcttggt gtactgcagc gcgtaggtca cgctccagtt gtcgccggtc
     9361 ttgccgccgg cccaggacag atcccaggta tcacggccgc cttcagtgga agtaccgccg
     9421 cgcacacgca cttcgtcgcc gtcatagttg gttttcagaa tgacgttgac cacgccggcg
     9481 atcgcgtccg agccatagat ggccgaggca ccgccggtca gcacttcgat gcgctcgacc
     9541 gccgcagccg gaatgttgcc gtagttggag aagttggttt caccgccata gggcagcggg
     9601 tagtcggcga cgcgacggcc gttgaccagc agcagcgagc ggttcgggcc catcccgcgc
     9661 aggttcaggc cgctggcatt gggcgtatgc gagccccact gcgacgccgc ttcgacggta
     9721 ccggttgctt cggtgagcgt cttcagcgcg tcgtacacgc tgacaaagcc ctccttctgg
     9781 atctgcgcgg cggtgatcac gttgaccggc gccgggcctt cgacgctggc gcgcttgatg
     9841 cgcgagccgg taacggtgac cgcatcgaga tccttggtgg acgaactgga actttcctgc
     9901 gcgctggccg ccaggggcaa cagggccagg accagggcct gggacagcag gtgacggcgc
     9961 ttgcggacgg actgagccat gggtggttgc tcttcgaagg tgtggacgca cggacgggcg
    10021 gtggcgcggc actacggctg atccgggcgc ctggatcggt ccaggaccgg tgcggcaccc
    10081 tcccctgtgg atcgatccaa actaaagcac agctgaacca catccggcat gtggcggcgc
    10141 agcaacgccc ggcggaatgc cgctaacggc ccccgccagc catgacaatc aaagagttgc
    10201 gtgatatcgc tgagcgtgcg gcgcacgaag gggtgacaca attgcgacag acgcgcgcgg
    10261 aacggttttg tccgccctca gcggcttcta tcactcgatt gagccgggac aaaacggcca
    10321 ttgcggagtg catagcggct tgaggccttt ccgtcgggcc ctgcacccca ccacttgatg
    10381 gtgaacccgt cgttctgcca gaccacggaa gaaaagtcgg actcactttc ggaacttccc
    10441 gagttctggc tggccaggga cacggtctca aggcaactac tgatcagcat cttgccccgc
    10501 tcgacaggct tgggcgggat caattcgtag acgaagagtt ggatctcgcg ccccgcgcca
    10561 caagggccca tcgggttgtc ggcgtttgaa tcgaatacct ggtaaaccgc ccgaaagcgc
    10621 cggtttccaa tcaaatgtat gcgcgtgtcg acgaacgcac ctttcgcagc gggagtcagc
    10681 gtcaccccgt ccaggacagc gtcgatgcgg tttccctcgg gaccggcagc cctccagatc
    10741 aatacgggtg actgcccctc ttccgcagct gttacggcgg cgggcagcaa acacagaaac
    10801 agcaagagca gtcgaggcat gcagaaggag aatcgttgcc accaagcgtt gggcccactg
    10861 tcggcactcc caaccagatc gtccatccca aagtacggat gcccctgcat tccgctgttt
    10921 ggcggacggc ctggccatcc gcacgcgtca aaagcgtcac ttttcggcaa cgcgtgccta
    10981 tccgggtggg gtcagagccc tgctgcgaag agatccgacc ccgggcttgc gatcagccgt
    11041 ccagcgcttg ccgtagtgcc gccacggtcg cggtggcggt ctggctccag tccgggtcca
    11101 ggccgcgcag cgccggatta tggaactgca tggccgagcg tcgcaggccc ttggctgaag
    11161 catgcagttc ggtacagccg ctgcgtcgcg cgacgcccgc gatgttgccc ggggccagcc
    11221 ccgcgccggc catcaccgtg atgcggccag cggcctgcgt gaccaggccc gccagcacct
    11281 cggcaccggc ttcggcgctg acctggccac ctgaggtcag cacccgctgg cagcccagcc
    11341 cgatcacctg ttccagcgcc gccggcagat cacgggcggc gtcgaaggca cggtggaagg
    11401 tcacctgcaa cggcccggca gcctgcacca gttcacggca cagcgccaga tcgatgccac
    11461 cctgcacgtc cagtgcaccg atcaccacgc catcgcagcc gagcgcacgg cactgcgcga
    11521 tgtcgcgcag catcagttcg gtttccagcg cgtcgtagtg gaagtcgccc gcacgcggcc
    11581 tcaccagcac gaacaatgga atcgacaggc gttcgcgggc aatcgcgatg ctggcgaacg
    11641 acggcgtggt gccgccctcg gccaggttgt cgaacagctc gatgcggtct gcgccaccgg
    11701 cctgggcggc caacgccgaa gccagcgagt tgctggcgat ctccaggctc agtcgcgtgc
    11761 tcatgcctgg gtgctcgtgt agatcgatgg cgaatcgcgc aggtcatcct ggcgctgcgc
    11821 atcgcacacc gcgtagacga agccgcggtg cagtgcatag gcacccacct cgccctgctt
    11881 gttcatcgcc aggaagcaca cctgcagcgt cctgctcgct tccgggcgcc tgcgcacaac
    11941 gcggtcgatg gcttcgcggc aggcctgcgc cggcgagcgc ccctgccgca tcagctcgac
    12001 caccaggaaa gaggcggcgt tgcggatcat ctcctcaccc acgcccgacg cggtggcggc
    12061 gccgacctcg ttgtcgacgt acaggccggc accgatgatc ggactgtcgc cgacccggcc
    12121 gtgcagcttc caggccatgc cactggtggt gcaggcaccg gccaggtggc ccttggcatc
    12181 cagcgcgagc atgccgatgg tgtcgtggtt gtcgctgttg ccggggatgc cccggcgttc
    12241 ggcattgatc tgcggctggt acttctcggt cttcagccat tcgcgccagg cggcttcggc
    12301 ctgcggcgtc agcagatgtc tgcgctcgaa accctgctgc atcgcgaact gctgcgcgcc
    12361 gtcgcccacc agcagcacgt gcgggctgtt ctccatcact ttgcgcgcca ccgacaccgg
    12421 atgcaggatg tcgaccagcg cggccaccgc accgcagcgg ccatcaccgt ccatgatgct
    12481 ggcgtccagg ctcagcacgc cgtcgcgatc cggattgccg caatggccga cggtggggtt
    12541 gcacagctcg ctctcggccc agcgtgcgcc cgcctcgacg gcatccagcg cgctgccgcc
    12601 ctgggccagc actttccatg cggcctggtt ggccggcacg ccgaagtccc aggtggaaac
    12661 caccttggcc ccaccctgcg tgcgcgcctg cacgcccggc aatgccgcca tgcttgcggc
    12721 cagcgcaccg gcctgcagga actgcctgcg atccaccatc ttcccctccc agtctgcaat
    12781 gcacgaccgg cccgatgccg gccctgccga tcagtcgtgc gtgggctgcc gtgcggcgtg
    12841 ccagaccgct gcaccgagca cgcccagctg gccgtgctcc acgcgccata ccggcacctg
    12901 gcgcagcacc tcgctcagca cgcccttgtt gaggaagcgc gcgcggaagc ggccatcggc
    12961 caggaaatcc tgcacatgcg cggaaatgcc accggccagg tacaccgagc gcgcgccgac
    13021 ggcgatcgcc gcgtcgccgg ccaggctgcc caaccaggca cagaacacct gcagggtctc
    13081 caccgccaac gcatcctcgc cactgcgggc ggcgccgatc agcgcctcgg tgctggtcca
    13141 caccggagtg gcgccgcgca gttcgcacag gcacggatac aggttcatca ggccactgcc
    13201 ggacaacacg cgttcgttgt ccacgtgcgg ccagcgctgc agcagtttgc ccagcacctg
    13261 cagctccagc gcgttgcccg cgccgagcgc ggcatggccg atctcgctgg ccagcaccgg
    13321 gcgttcgcca tcggcaaagc gcagcgcggc accgagtccg gtgccggcgc ccagtaccag
    13381 tgccgggaac gcctgcgccg gatcggcgtc gccgttcagc ggcaccaggg tttccggctg
    13441 caggtaggga atggccagcg ccacggcttc gaaatcattg atcaactgca gttcgtgcag
    13501 cgcggactgc gcgcgggtgg ccgacagcga caccgtccac ggcaggttgg agttgatcag
    13561 cacatcgcca tcgagcaggc cggcaatggc caccactgcg gtcttcaccg gctggccaag
    13621 gcccgaagtg aaatcagcca ggatcgcggc caggcttgga tactcggcgc aggcataggt
    13681 gcgatggctg cccaggcgcg gcggctgccc ggccagcgtc tcggccaatg ccaggcgagc
    13741 gaaggtgccg ccgacatcgg cgacaacgag acggcgcgga agaccgccgc gggcggagtc
    13801 ggtggaaacc ggggacgctg ctgcgatggt cacgcgggcc tgcttggatc gattgaatcg
    13861 ccccgattct caggcatcgg ggcggctttg cctagcgcgc cgacggttca ggttggccta
    13921 catgccttcc tgctcggcca cctgcacacc atccaccagc acgcgcaggc gctgcgggcg
    13981 gaaaccggcg aacagcagcg gccgggtacg ttcgaccagc acttcatggc cggcgatgtg
    14041 gcgcagccac gactgtacca gcgagaacga gaaatgcgtg cccgggtgcc acggatgctg
    14101 cacccagacc ttctcggtgg cgctctgcag cagcatcgcg ccggtgaacc agtggcggct
    14161 gagggtgacc ggcgtagtgc cggccatgaa acggatatcc atgcgggttc ctttcgctgg
    14221 agcggcactg ccgagggtca gggctgggca gtctgcaggc tgtagctggt ggtggcggtg
    14281 aacaccgcac cgtcgggctg ggtggaacgc acctcgacct tgtggctgcc cacggacagg
    14341 tcggtcggca gcgcgccacg ccacaggtgc ggcgacgcgg tggcctccgg cgagcggtca
    14401 tagccacgca gcgtgacggc caggtcgtcg gcaacgttct ccaccatcag ccgcggatcg
    14461 ggctggctga cctgtttcat cggctgccag gcgccaccat cgacgcggta ctcgaccacg
    14521 ctggtatcct cacccatgta gacattggcg tagatgcccc acgccgggta ggcgccctgg
    14581 cgcagtacct tcggtgcatg caggccgatc tgctcgctgg ccggcttgcc ggccacgcgg
    14641 tactgcaggc gatagctgcc gttgccagcg acgtcgagca gcgcgtagcc cttcggcgtg
    14701 ccatcgctca tggtgctgtc cggtaccccg gcggcattct tcacccccga ccagaacgca
    14761 ccgcagttgg caccgacgtt gtattcgtgc agcggcttgt cgccgttcca gccctcggcc
    14821 ctgccgtggt agacgtgttg ctgggtgtgg ctgtggccgc tcagcaccag cacgttgcgg
    14881 aagtccttga gcaggtcgaa caggcgctgg cggtcggcgt gacggaacgt ctcgcgcccc
    14941 ggcgcagcgt cgaatagcgg gatgtgcatg cccagcacca gcaggcggtc cttgtgcagg
    15001 cccttcaggt agctggcaag gaacgtgaac tggtcttcgc gcaggccgcc gacgtacttc
    15061 ggcttggcct tggggtcata caccacgtcg tcgaggaaca cgaaactggc gccgccctct
    15121 tccaccgcat aggtgtccgg gccatagacg ttgcgccagc tgtccagcga atgcgcgtcg
    15181 ctggccgcat cgaagtcgag atcgtggttg cccggcacat ggaaccacgg cacgcccagc
    15241 gacgtggtga ccttgttgat cgccgggtac agggccaggt cgtcgttgac gatgtcgccc
    15301 agcgtggtgc ccatgcgcgc cttggtctgg ccgaccagcg gcgccacgat cgactgctgg
    15361 tagtagccga tgtccttcag gctggcagtc tgcgaatcgg tgaacaccag catctggaag
    15421 ccacggcggc tgtcatggcg gtccgcctgc agggcgaaat cccagttgcg ggtgacgtca
    15481 ctggtggcgg cgatgccgcc gtacttcagc gccggcgaac cgttcgggcg atagtgccgc
    15541 cagaacgacg gcaggccgtc ggccgccttc gggaaggcgt aggcatcggg cttgatcacg
    15601 aacacggtct ggccatcgcg caccggcagg ctgtagctgc cgtcggcggc ggtcttgacg
    15661 atggtctcgc cgttggagac ctgcaccccg gccaggcccg gatcggtcgc gccccggccc
    15721 ggcttgccgt cgcgctccag atagaccttg ccgctgacca cggtgtccgc ggcccaggcc
    15781 ggcgaagtca gcaacaggca gcacagccag gcggcaggca gtttcatggg acggtccggg
    15841 aaagaagaag accccctatt gtagagccga gc
//
LOCUS       DAOKIP010000085        15780 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.085,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000085 DAOKIP010000000
VERSION     DAOKIP010000085.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 15780)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15780)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15780
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.085"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(75..1712)
                     /locus_tag="QEL58_002208"
     CDS             complement(75..1712)
                     /locus_tag="QEL58_002208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010482844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HDS1676669.1"
                     /translation="MSGPSFSSSAPFETHVVLNQPPPFAGRHLWTDDVALMEAVQREG
                     AGSFAPRLAVYGALAGDELYRLGFDANRDRPRLRTHDAQGHRIDTVEFHPAYHQLMGT
                     AKQHGVAGLSWHEPQPGAHVARAALSYLHHQAEAGTSCPLTMTHAAVAVLDPHPHLAE
                     WARKAAAPVYDPRDVPVADKAGITLGMGMTEKQGGSDVRANSTRAEPIDGERYRLVGH
                     KWFFSAPMCDGFLVLAQAPGGLTCLLMPRRLADGDRNAFRLMRLKDKLGDWANASSEV
                     EFCGAQAWRVGEEGRGVATIIGMVMMTRLDCMLGAAAEMRMALAQALHHARHRRTFGT
                     LLVDHPLMANVLADLALESEAATVLSMRIARAVDRAGVDGNEAALARLGTALGKYWIC
                     KRAAAFVNEAQECLGGAGYVEESMLPRLYRQAPLNSIWEGSGNIQCLDVLRALAREPE
                     AMVALRGELAAVADRDARYAAALQRWAAAPPPQESQARMFCERTALLLQAALLLRARS
                     PMAEAFVRSRLQGEHGLAFGTLPAGLDVSGMLARALP"
     gene            1826..2824
                     /locus_tag="QEL58_002209"
     CDS             1826..2824
                     /locus_tag="QEL58_002209"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010482842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ligase-associated DNA damage response
                     exonuclease"
                     /protein_id="HDS1676670.1"
                     /translation="MTGNDDLVVLRPEGLYCAAGDFHIDPWRPVPRAVITHGHGDHAR
                     PGMGEYHCSEGSLPILRWRLGDVPVQAHAEGVPFRLGRVQVSLHPAGHVLGSSQVRID
                     DGQQVWVASGDYKRQPDPTCTPFEVVPCDTFITEATFALPIYRWPDTPAVAAGIVAWR
                     RECEQRGEAAILLCYALGKAQRVLAELLLLDDRPAWLHGAIANGVAVYRQAGVPMLET
                     HTVAEQGRQPDAAGQLILAPPSAAGTPWMRRFGRHQLGFASGWMQLRGNRRRRNVDRG
                     FVISDHADWPALLQTIEQTGAQRVIATHGNTDALIPFLRERGVAAEAFRTDFGSEE"
     gene            2821..4428
                     /locus_tag="QEL58_002210"
     CDS             2821..4428
                     /locus_tag="QEL58_002210"
                     /EC_number="6.5.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019300442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA ligase"
                     /protein_id="HDS1676671.1"
                     /translation="MKAFAALYQRLDRSTATLNKRAALVDYFRQARAHDAAWALYLLS
                     GGKVGGARRKIAASGELRAWIAEQSGLPPWLVEDSYAQVGDLAETLTLLLDDPAQPAA
                     DRPLAEWIEQHLLAVANQDEPVRRAAVVAGWQQLCSSERLVFNKLLTGALRVGVSQRL
                     VQQALAEWSGLDIARIAQRMLGEWVPSPGLLGQLLSPDELPLDRQQPYPFFLASPLEG
                     EPEERLGPIDDWMLEWKWDGIRLQLLRRRGETALWSRGEERLDGRFPEIEQAALALPD
                     GCVLDGELLAWDESGRVPRAFTALQTRIQRRRPGAATLRNTPVRVLAYDLLELDGGDL
                     RTLPLQQRRLRLAEVIGGLSDTRIQLSPEVVADDWAHAAAMRELARERGVEGLMLKRR
                     GSPYQAGRRRGDWWKWKVDPLTIDAVLLYAQAGHGRRSTLYTDYTFGVWDGDALVPVA
                     KAYSGLDDKEILALDRWIRANTRERFGPVRSVRAEQVFELGFEAVNQSSRHKSGVAVR
                     FPRILRWRHDKPASEADQLATLQALAR"
     gene            4425..6884
                     /locus_tag="QEL58_002211"
     CDS             4425..6884
                     /locus_tag="QEL58_002211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014038074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ligase-associated DNA damage response DEXH box
                     helicase"
                     /protein_id="HDS1676672.1"
                     /translation="MTRNQALRRLEDWFVGRGWRSLPFQRAMWRHYLAGESGVLHTPT
                     GSGKTLAMFGGPLLQAMIDPPASPRRASAVRPLQVLWVTPLRALASDTARALQAVVDG
                     LGLGWRVGLRSGDASNRERRQAREGRVDVLVTTPESLALLLSYPDTLPRMRQLRCVVV
                     DEWHELLGNKRGVLLQLNLAVLREAAPALQLWGLSATLGNLQEARDVLLPGQPDAPIV
                     QGVRPRAISVRSLLPEPGERFPWAGHLGLAQLPRVLEALMQARSSLLFTNTRAQAELW
                     HHALAAVWPEDPDTLALHHGSLDPALRQQVEDGLRAGTLRCVVATSSLDLGVDFPEVE
                     QVLQLGSPKGVARLRQRAGRARHRPGAGGAILCIPSHALELAEYAAVRRALAEGVVEA
                     RRPPTLSLDVLAQHAVSRALAGGFHSDALLAQVRRTHAFATLGDEQWQAVLTFIVQGG
                     QALAQYPDFHKVVRDDNGCYRMHDRRQALRHRLSIGTISSDGSVRVQFLRGGGLGAVE
                     EQFASRLRRGDRFQFAGRLLELVQLRDMTAFVRLARGRGDGVVPRWQGGQLPLSMALG
                     RELESVLSCTDDSAESRWLAPLLALQQQMSARPAPDHLLVEDVRRRDGQFLFVYPFAG
                     RHVHEALAALLALRCTRLQRNSIGYAVNDHGLVLAPAQAIDMDTAQWRTLFTGDRLLD
                     DLRAAVNLGELARRQFRGIARVAGLLVPSLPGGMPRSLRQLQASAGLLYDVLREHDPD
                     HLLLALAEREVLYDSLDLPGLQQVLARISTQALSVQRPASLTPLGFPLWAERLRGQFS
                     NEDWRTRVQRAAQQLERRHGR"
     gene            6874..7515
                     /gene="pdeM"
                     /locus_tag="QEL58_002212"
     CDS             6874..7515
                     /gene="pdeM"
                     /locus_tag="QEL58_002212"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019183436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ligase-associated DNA damage response
                     endonuclease PdeM"
                     /protein_id="HDS1676673.1"
                     /translation="MVDELPVRLAGEAMVLIGARALHWPARQALLIADLHLGKADVFR
                     RAGIALPRGGTAGDLQRLQSLLDMHACRELWILGDILHGPAHRAAWYQQWLGWRERNA
                     GLDVHVLRGNHDRQLPHAQLQVQIHDEIGLAPFLLRHEPVPDAAMHVIAGHLHPQVAL
                     PSLRRRFPAFWLRERMTILPAFSAFTAGIVPVPIRGEQMIACVDGGLVQLPAR"
     gene            complement(7517..7786)
                     /locus_tag="QEL58_002213"
     CDS             complement(7517..7786)
                     /locus_tag="QEL58_002213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005418216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676674.1"
                     /translation="MLFAVEELESEICKLRGLLQMLHEDQPDVLEDVFEFHVGSLISH
                     ASPEHHARIRACAQEMLAAIQALPRRRDDDTADFRLMPALGLRPA"
     gene            complement(7968..9236)
                     /locus_tag="QEL58_002214"
     CDS             complement(7968..9236)
                     /locus_tag="QEL58_002214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008268192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HDS1676675.1"
                     /translation="MKERLRIAVIGYGTAGQALSILLTRDGHEVDIFERVPTPGPVGA
                     GFLLQPSGLQVLWQMGLLDAVRAHAAPVHRLYGDTPCERAVMDMRYDGLDARLHGLGM
                     QRGALFSLLDEARDGAGQLRAGITITGVDAEQGRLRDGEGRTHGPFDLVVAADGAAST
                     LRSTIAAGAGLDRVYPWGALWCLLPAEDWPHVQELRQRYVAARKMIGLLPVGTRPGDD
                     TPRLSFFWSLPRTDFERWQNDGMPSWLEELHTLWPQAAARFAHLRDAGQLARAVYRDA
                     VMSRWHQGRLVLAGDAAHAMSPQLGQGVNMALLDALALRDAVRIHGGGTAALQAYQAQ
                     RRAHVAVYQRWSRWLTPLFQSDRDGWAKARDVLLGPMGRLPGGRSHMLRVLSGTQHGW
                     FGSLALEPAFIEALRSAAETPRTGAAIAGV"
     gene            complement(9338..9544)
                     /locus_tag="QEL58_002215"
     CDS             complement(9338..9544)
                     /locus_tag="QEL58_002215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003488188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HDS1676676.1"
                     /translation="MPNGTVKWFNDAKGFGFISPEDGSADVFAHFSAINSKGFRSLQE
                     GQRVTYDVTQGPKGAQASNITPAE"
     gene            complement(9633..10379)
                     /locus_tag="QEL58_002216"
     CDS             complement(9633..10379)
                     /locus_tag="QEL58_002216"
                     /EC_number="2.4.2.44"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019662159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-methyl-5'-thioinosine phosphorylase"
                     /protein_id="HDS1676677.1"
                     /translation="MQQIALAVIGGTGVYNLAKLDDVQTHEVDTRFGRPSGPVRVGTL
                     LGHRVAFLARHGEGHSLPPHKINYRANLAALQQLGAQRVLALNTVGGITEHFGPRVLA
                     CPDQIIDYTWGRISTVCEEEGTDVVHVDFGHPYTPMLRSKILAAAKVTGVTVHDGGCY
                     GATQGPRLETIAEIARMRRDGCDLVGMTGMPEAALARELGLDYACLAIIANWAAGCGD
                     GEEITMAEVLANVQAASNGLPELVGELARG"
     gene            complement(10462..11016)
                     /locus_tag="QEL58_002217"
     CDS             complement(10462..11016)
                     /locus_tag="QEL58_002217"
                     /EC_number="2.4.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006449878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypoxanthine-guanine phosphoribosyltransferase"
                     /protein_id="HDS1676678.1"
                     /translation="MPNLTISQALAQADLLVDRPTIDKAIAGIADAIARDYKGEVPLF
                     LSIMHGALPFAGQLALELGARGQDVQFDYLHATRYRGETTGGDLVWKHKPATSLFGRR
                     VLLIDDILDEGYTLQGVRTWCLEQGATDVRIAAMTVKKHDRALPDVVADYAGIELPDR
                     YVFGFGMDVNETLRCVPAIYAMKE"
     gene            complement(11016..12023)
                     /gene="nagZ"
                     /locus_tag="QEL58_002218"
     CDS             complement(11016..12023)
                     /gene="nagZ"
                     /locus_tag="QEL58_002218"
                     /EC_number="3.2.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019336693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-N-acetylhexosaminidase"
                     /protein_id="HDS1676679.1"
                     /translation="MLLIGVAGTELTAQERDWLQHDAVAGVVLFKRNFASRQQVTDLS
                     AAIRAAAPRPQLICVDQEGGRVQRFREGYSELPPLQEIGALYATDPQRALALAEQHAW
                     LMASEVRASGVDLSFAPVVDLGRGNRAIGNRAFSEDPQVVAAFTAAYVRGMHAVGMAA
                     TLKHFPGHGTVLEDTHVDTAIDPRALDELRAQDLVPFQAGIAAGADAVMMAHVIYPQV
                     APEPAGYSPRWIQDILRGELGFRGVVFSDDIGMAASHSAGGVPARVHAHLDAGCDVVL
                     VCHPELVDEALHAVQGRSLNTAALLGLLGRGALGWDGLLADARHGDTQSRLLETLGRT
                     V"
     gene            complement(12187..12882)
                     /locus_tag="QEL58_002219"
     CDS             complement(12187..12882)
                     /locus_tag="QEL58_002219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017155610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbA family oxidoreductase"
                     /protein_id="HDS1676680.1"
                     /translation="MRIDIYSDVVCPWCWIGKHRFQQGVQLLGADAPELDIHWQPFQL
                     DPDADAKPVPLREAYVRKFGGVERTEQILNQTQTTARAEGLPMDFSQGQVRVTTLPAH
                     RVLWLAGQHGVQDAVGEALFRAHFELGQNLADSSVLVKAGVAGGLDAGEITQMLASDR
                     GLAEVEAKLQEAHALGISSVPTFVIDGRWAISGAQPPEAFANALRQIAAEQGTSASPA
                     EGDEACGPDGCKV"
     gene            complement(12996..13481)
                     /locus_tag="QEL58_002220"
     CDS             complement(12996..13481)
                     /locus_tag="QEL58_002220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014647992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CYTH domain-containing protein"
                     /protein_id="HDS1676681.1"
                     /translation="MGIEIERKFLVSSDGWRTAAHRVIPMAQGYINDMGALDRGTQNA
                     SVRVRIEGDRAALNLKSRTIGHTRQEFDYPIPVEDARALLALCVGGLIDKRRHLVDHA
                     GLTWEVDEFLGDNAGLVVAEVELDSADQVIDLPDWVGAEVTDDARYYNVALASHPYSQ
                     W"
     gene            complement(13515..14849)
                     /gene="rlmD"
                     /locus_tag="QEL58_002221"
     CDS             complement(13515..14849)
                     /gene="rlmD"
                     /locus_tag="QEL58_002221"
                     /EC_number="2.1.1.190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010380519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (uracil(1939)-C(5))-methyltransferase
                     RlmD"
                     /protein_id="HDS1676682.1"
                     /translation="MARSRSRIDRTPFQTEILDLSHDGRGVARREGEGGKVTFISGAL
                     PGEVVMAEQTARSRHFDEARTVQVLQASPQRVTPKCPHFGTCAGCVLQHLDEDQQIVA
                     KQRVLMDNLERIGHVKPGTVLAPLVGESWGYRRKGRFSVRRVEKKDKTLVGFREQDPR
                     FVADLGQCLTVIPEIGTKVEALSTFIESLDGKRDIPQIEFIAGDQAVVLTVRHLQPLS
                     DADRAAWAAFGQQHGFVIYLQSGGVETVQPLDGQGVPLSFRLAPWDVELAFRPLDFIQ
                     VNAKLNEKMIAHALDLLEPGEDERVLDLFCGLGNFTLPLARRVREVVGVEGDAGLVAR
                     ARENAERNGLANAQFFSADLTQDQRSTAWMRQGFDKLLLDPPRSGAIEVLQQLPLKQF
                     KRIVYVSCHPGSLARDAGYLVNEQGFTLVSAGAMDMFPHTAHVESIAVFEKR"
     gene            14977..15705
                     /locus_tag="QEL58_002222"
     CDS             14977..15705
                     /locus_tag="QEL58_002222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014647994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HDS1676683.1"
                     /translation="MQMTPRTSRPRFLLVEDDIISRGFFKAALETLPADVDTADSLAS
                     ALASAEPGAHDLWLIDVNLPDGNGAQLLRELRRSHPDTPALAHTADGDTSIHARLREA
                     GFSDTLVKPLGRDQLLKAVRRALVNSPAGIFVAQAPAAVELQVQDWDETAALAALNGQ
                     RNHLIALRELFLAELPGVRDAVEQAVHQHDERQLRSQLHRLQASCGFVGAARLGRAVR
                     QLHHAPESGQAQDGFRAAVAALLH"
BASE COUNT         2501 a         5439 c         5342 g         2498 t
ORIGIN      
        1 acccacccgc gcggcccgct cacgacgcag actccgcgcc gcccgccacg aggggctcgg
       61 ccgttggccg ccgcctacgg caacgcgcgc gccagcatcc ccgacacatc cagccccgcc
      121 ggcagcgtcc cgaacgccag cccgtgctcc ccttgcaaac gactgcgcac gaatgcctcg
      181 gccatcggac tgcgcgcacg caacagcagc gccgcctgca gcagcagcgc tgtgcgctcg
      241 cagaacatcc gcgcctgcga ttcttgcggc ggcggtgccg ccgcccagcg ctgcagggcg
      301 gccgcatagc gcgcatcacg atcggccacc gcggccagtt caccgcgcag cgccaccatc
      361 gcctcgggct cacgtgccaa cgcgcgcagc acgtccaggc actggatgtt gccgctgcct
      421 tcccagatcg aattcaacgg tgcctgccgg tacagccgcg gcagcatcga ttcctccacg
      481 tagccggcac cgcccaggca ttcctgtgct tcattgacga acgccgcggc acgcttgcag
      541 atccagtact tgcccagggc cgtgcccagc cgcgccagcg ccgcttcgtt gccatccacg
      601 ccggcacgat ccaccgcgcg cgcgatacgc atcgacaaca ccgtggccgc ttccgactcc
      661 agcgccagat cggccagcac gttggccatc agcgggtgat cgaccagcag cgtgccgaag
      721 gtacgccggt ggcgcgcatg gtgcagcgcc tgtgccaatg ccatgcgcat ctccgctgcc
      781 gcacccagca tgcaatccag gcgggtcatc atcaccatgc cgatgatggt ggccacaccg
      841 cgcccctcct cgcccacgcg ccatgcctgt gcgccgcaga actcgacttc gctggacgca
      901 ttggcccagt cacccagctt gtccttcagc cgcatcagcc ggaacgcgtt gcggtcgcca
      961 tcggccagcc ggcgcggcat cagcaggcag gtcagtccac ctggcgcctg cgccagcacc
     1021 aggaagccat cgcacatcgg cgcagagaag aaccacttgt ggccgaccag gcggtagcgc
     1081 tcgccatcga tcggttcggc gcgggtactg ttggcccgta cgtccgagcc gccctgcttc
     1141 tcggtcatgc ccatgcccag ggtgatgccg gccttgtccg ccaccggcac gtcgcgtggg
     1201 tcgtagaccg gcgcagcagc cttgcgcgcc cactcggcca gatgcgggtg cggatccagt
     1261 accgccaccg cggcgtgggt catggtcaac gggcagctgg tgcccgcctc ggcctggtga
     1321 tgcaggtagc tcagggccgc acgcgcgaca tgcgcaccgg gctgcggctc gtgccacgac
     1381 agtccagcca cgccatgctg cttggccgtg cccatcagct ggtgataggc cggatgaaac
     1441 tccacggtat cgatgcgatg gccctgcgca tcatgcgtac gcagtcgtgg ccgatcacgg
     1501 ttggcatcga agccgagccg gtacagttcg tcaccggcca gcgcgccgta caccgccagg
     1561 cgcggtgcga agctgcccgc accctcccgc tgcaccgcct ccatcaatgc cacgtcatcg
     1621 gtccacagat gacggccggc gaacggtggc ggctggttca gcaccacatg ggtttcgaag
     1681 ggcgcgctgc tgctgaagct cggtccactc atccggtcca tcctggcggc aagaagtgtg
     1741 cggctcgatt gtgccgcatc acctgccaag cccgcgttca ggccggttct caccccgtgc
     1801 acgaggcagc ggccacagtg accgcatgac aggcaacgac gatctggtgg tcctgcgccc
     1861 ggaggggctg tactgcgccg ccggtgactt ccacatcgat ccctggcgcc cggtgccacg
     1921 tgcggtcatc acccatggcc atggcgatca cgcgcgcccg ggcatgggcg agtaccactg
     1981 cagcgaaggc agcctgccga tcctgcgctg gcgcctgggt gacgtgccgg tgcaggcgca
     2041 tgccgagggc gtgccgttcc ggctggggcg ggtacaggta tcgctgcacc cggccgggca
     2101 tgtgctgggt tcgtcgcagg tccgtatcga tgacgggcag caggtctggg tggcgtccgg
     2161 cgactacaag cgccagcctg atccaacctg cacgccgttc gaagtcgtgc cctgcgatac
     2221 cttcatcacc gaggccacct tcgcgctgcc gatctaccgt tggccggaca cgccggcagt
     2281 ggctgccggg atcgtggcgt ggcgccgcga atgcgaacag cgtggcgagg ccgcgatcct
     2341 gctgtgctac gcactgggca aggcacagcg ggtactggcg gaactgttgc tgctggatga
     2401 tcgcccggcc tggctgcatg gcgccatcgc caatggcgta gcggtctacc ggcaggccgg
     2461 cgtaccgatg ctggagacgc acaccgtcgc cgagcagggg cgccagccgg atgcagccgg
     2521 ccagttgatc ctcgcgccac cctcggccgc gggcacgccg tggatgcgtc gcttcggccg
     2581 ccatcagctg ggcttcgcgt ccggctggat gcagctgcgc ggcaatcggc gccggcgcaa
     2641 tgttgatcga ggtttcgtca tttccgacca tgccgattgg cctgcgctgc tgcagaccat
     2701 cgaacagacc ggcgcgcagc gggtgatcgc cacccatggc aacaccgacg cgctgatccc
     2761 cttcctgcgc gagcgcgggg tggctgccga agccttccgt accgacttcg ggagcgagga
     2821 atgaaagcct tcgccgcgct ctaccagcgg ttggaccgca gcaccgccac gctgaacaag
     2881 cgtgcggcgc tggtcgatta cttccgccag gcacgtgcgc atgatgcggc atgggcgctg
     2941 tacctgctca gtggcggcaa ggtcggcggc gcgcgcagga agatcgctgc aagcggcgaa
     3001 ctgcgcgcct ggattgccga acaatcgggt ctgccaccgt ggctggtcga agacagctat
     3061 gcgcaggtcg gtgacctggc cgaaaccctc accctgctgc tggatgatcc ggcgcaaccg
     3121 gctgccgacc ggcccctcgc cgaatggatc gaacagcact tgctggccgt ggccaaccag
     3181 gacgagccgg tacgccgcgc agcagtcgtt gccggttggc agcagctgtg cagcagcgaa
     3241 cggctggtgt tcaacaagct gctgaccggc gccctgcgtg tcggtgtttc gcagcgactg
     3301 gtgcagcagg cgctggccga atggtcgggc ctggacatcg cacgcattgc ccagcgcatg
     3361 ctcggcgaat gggtcccctc acccgggctg ctgggccagc tgctgtcacc ggacgagctg
     3421 cccctggacc ggcagcagcc ctacccgttc ttcctcgcct cgcccctgga aggcgaaccg
     3481 gaagaacgcc tcggcccgat cgacgactgg atgctggaat ggaaatggga cggcatccgc
     3541 ctgcagctgc tgcggcgccg cggcgaaaca gccctgtggt cacgcggcga ggagcgactg
     3601 gatggccgct tccctgagat cgaacaggct gcattggcct tgcccgatgg gtgcgtactg
     3661 gacggcgagc tgctggcctg ggacgagagc ggcagggtgc cgcgcgcctt cactgcgctg
     3721 cagacccgca tccagcgtcg caggcccggt gccgccacgc tgcgcaacac gccggtacgc
     3781 gtgctcgcct atgacctgct tgaactcgac ggtggggatc tgcgcacgtt gccgttgcag
     3841 cagcgacgcc tgcggctggc agaggtcatc ggcgggctga gtgatacccg catccagctg
     3901 tcgcccgagg tggtggccga cgattgggcg cacgccgccg cgatgcgcga gctggcgcgc
     3961 gaacgcggcg tggaaggatt gatgctgaaa cgacgtggct cgccctacca ggccgggcga
     4021 cgccgcggcg actggtggaa atggaaagtc gatccgctca cgatcgatgc cgtgctgctg
     4081 tatgcgcagg ccggacacgg ccgccgcagc acgctgtaca ccgactacac gttcggcgtc
     4141 tgggatggcg acgccctggt gccggtggcc aaggcttact cgggcctgga cgacaaggaa
     4201 atcctcgcac tcgaccgctg gatccgcgcc aacacgcgcg agcgcttcgg gcccgtacgc
     4261 agcgtgcgcg ccgaacaggt cttcgaactg ggcttcgaag cggtcaacca gagttcacgg
     4321 cacaagtcgg gcgttgccgt gcgcttcccg cggatcctgc gctggcgcca cgacaagccc
     4381 gccagcgagg ccgatcagct ggccacgctg caggcgctgg cgcgatgacc cgcaaccagg
     4441 cgctgcgtcg gctggaggac tggttcgtgg gccgcggctg gcgctcgttg ccgttccagc
     4501 gcgcgatgtg gcggcactac ctggccggtg aatcgggcgt gctgcacacg cccaccggca
     4561 gcggcaagac gctggccatg ttcggtgggc cgctgctgca ggcgatgatc gacccaccgg
     4621 catcaccccg tcgcgccagt gcggtgcgtc cgttgcaggt gctgtgggtg acgccgttgc
     4681 gcgcactggc cagcgacacc gcgcgcgccc ttcaggcggt ggtcgacggg ctcggcctgg
     4741 gatggcgggt gggcctgcgc agcggtgatg ccagcaaccg cgagcggcga caggcgcgcg
     4801 aaggccgcgt cgacgtgctg gtgaccacgc cggaatcatt ggcactgctg ctgagctatc
     4861 cggataccct gccgcggatg cgccagctgc gctgcgtggt ggtggatgag tggcacgaac
     4921 tgctgggcaa caagcggggc gtcctgctgc agctgaacct ggctgtgctg cgcgaggccg
     4981 cgcctgcgct gcagctgtgg gggctgtcgg ccacgctggg caatctgcag gaggcacgcg
     5041 acgtgctgct gcctgggcag ccggatgcac cgatcgtgca gggcgtacgc ccgcgcgcga
     5101 tcagcgtgcg cagcctgctg cccgagcccg gcgagcgctt cccgtgggcc gggcatctcg
     5161 gtctggcgca gctgccgcgc gtactggaag cgctgatgca ggcgcgcagc agcctgctgt
     5221 tcaccaacac ccgcgcgcag gccgaactgt ggcatcacgc gctggcggca gtctggccgg
     5281 aagacccgga tacgctggca ctgcatcatg gctcgctgga tccagcgctg cgccagcagg
     5341 tggaagatgg cctgcgtgca ggcacgttgc gttgcgtggt cgcgacctcc agcctcgacc
     5401 tgggcgtgga cttccccgag gttgaacagg tgctgcagct gggcagcccg aagggcgtgg
     5461 cacgcctgcg ccaacgcgcc gggcgcgcac gccatcgacc cggagccggc ggcgccatcc
     5521 tctgcatacc cagccacgcg ctggagctgg ccgagtacgc cgccgtgcgc cgtgcactgg
     5581 ctgagggcgt ggtcgaggcg cgcaggccac cgacactgtc gctggatgtg ctggcccagc
     5641 atgcggtcag ccgcgcgttg gccggcggat tccacagcga cgcgttgctg gcgcaggtac
     5701 ggcgcaccca cgcctttgcc acgctcggtg acgagcagtg gcaggccgtg ctgacgttca
     5761 tcgtgcaggg cggccaggcc ctggcccagt accccgactt ccacaaggtg gtgcgcgatg
     5821 acaacggttg ctatcgcatg cacgaccgtc gccaggcgct gcgtcatcgg ctctcgatcg
     5881 gcaccatcag cagcgatggc agcgtacgcg tgcagttcct gcgcggcggt ggcctgggcg
     5941 cggtcgagga acagttcgcc agccgcctgc gccgcggtga tcgcttccag ttcgccgggc
     6001 gcctgctgga gctggtgcag ctgcgcgaca tgaccgcctt cgtgcgattg gcacgcgggc
     6061 gcggtgacgg tgtcgtgccg cgctggcagg gcggccagtt gccgctgtcg atggcgcttg
     6121 gccgcgaact ggagtcggtc ctgtcctgca ccgatgacag tgcggaatca cgatggctgg
     6181 ctccgctgct ggcgctgcag caacagatgt cggcgcgccc cgcgcccgat catctgctgg
     6241 tggaggacgt acgccgccgc gacggccagt tcctgttcgt ctatcccttt gccggccgtc
     6301 acgtgcacga ggcactggcg gcgctgttgg cgctgcgttg cacgcgcctg cagcgcaaca
     6361 gcattggtta tgcggtgaac gaccatggcc tggtgctggc accggcgcag gccatcgata
     6421 tggacacagc gcagtggcgc acgctgttca ccggtgatcg gttgctggac gatctgcgtg
     6481 cagcggtgaa cctgggcgag ctggcacgcc gccagttccg cggcatcgca cgcgttgcag
     6541 ggcttctggt gcccagcctg cccggcggca tgccgcgttc gctacgccag ctgcaggcct
     6601 cggcgggcct gctgtacgac gtgcttcgcg aacacgatcc agaccatctg ctgctggcgc
     6661 tggccgaacg cgaggtgctg tacgacagcc tggacctgcc tggcctgcag caggtactgg
     6721 cacgcatcag cacgcaggcg ttgtcggtgc agcgtccggc gtcgctgacg ccgctgggct
     6781 ttcccttgtg ggccgagcgt ctgcgcgggc agttcagcaa cgaagactgg cgcacacgcg
     6841 tgcagcgtgc cgcacagcaa ctggaacgcc gccatggtcg atgaactgcc cgtgcggctt
     6901 gccggtgaag ccatggttct gatcggcgcg cgcgcgctgc actggccggc gcggcaggcg
     6961 ctgctgatcg ccgacctgca cctcggaaag gccgacgtgt tccgtcgtgc cggcatcgcc
     7021 ctgccccgcg gcggcaccgc cggcgacctg caacgcctgc agtcgctgct ggacatgcac
     7081 gcctgccgcg aactgtggat cctcggcgac atcctgcatg ggcccgcgca tcgcgccgcc
     7141 tggtaccagc aatggctggg ctggcgcgaa cgcaatgccg ggctggacgt gcacgtactg
     7201 cgtggcaatc acgatcggca gctgccgcac gcgcagctgc aggtacagat ccacgatgag
     7261 atcgggctgg cgccgttcct gcttcgccat gagccggtgc cggacgcggc gatgcacgtg
     7321 atcgcagggc atctgcaccc gcaggtcgca ctgccctcgt tgcggcggcg ctttcccgca
     7381 ttttggctgc gcgagcggat gacgatcctg cccgcgttct ccgcattcac cgctggcatc
     7441 gtgcctgtgc ccatccgcgg cgagcagatg atcgcctgcg tcgacggcgg cctggtgcag
     7501 ctgcccgcgc gctgaatcag gccgggcgca ggcccagcgc cggcatcagg cggaaatccg
     7561 ccgtgtcatc gtcacgtcgt cgcggcaggg cctggatcgc cgccagcatc tcctgcgcgc
     7621 aggcacggat gcgtgcgtgg tgttcgggtg atgcatggct gatcaggctg ccgacatgga
     7681 actcgaacac gtcctccagt acgtcgggct ggtcctcgtg cagcatctgc agcagaccgc
     7741 gcagcttgca gatttccgat tccagctctt cgaccgcgaa caacatggcg tcctcctctt
     7801 caacatccgg cggcacgtcc gggccgcagc aggccgcaac ggcggcgcca cccgggccac
     7861 gcgcgatgtt gatcacggaa aggaaaacgg gcgacgcggc tgtcgcgtgc tcccctcttg
     7921 tcgcacaacc acggtgaggc aaccgttaat tcacgtgacg gtctgcttca cacacctgcg
     7981 attgcagcgc cagtgcgagg cgtttcggct gcgctgcgca gcgcttcaat gaaggctggt
     8041 tccagcgcga gcgaaccgaa ccagccatgc tgcgtgccgc tcagcacgcg cagcatgtgg
     8101 ctgcgaccgc ccggcaggcg ccccatcgga ccgagcagca catcacgcgc cttcgcccag
     8161 ccatcgcgat cggactggaa caacggcgtc agccatcggc tccagcgctg gtacaccgcc
     8221 acatgcgcgc gccgctgcgc ctggtaggcc tgcagcgcgg ccgtgccgcc accgtggatg
     8281 cgcaccgcat cgcgcagcgc cagcgcatcg agcagcgcca tgttcacgcc ctgccccagc
     8341 tgcggactca tcgcgtgcgc ggcatcaccg gccagcacca ggcgcccctg gtgccagcgc
     8401 gacatcactg catcgcgata gaccgcgcgc gccagctggc cggcatcacg caggtgggcg
     8461 aagcgcgcag cggcctgcgg ccacagcgtg tgcagttcct ccagccagga cggcatgcca
     8521 tcgttctgcc agcgctcgaa atcggtgcgt ggcaggctcc agaagaagct caggcgcggc
     8581 gtgtcgtcac cggggcgggt gcccaccggc agcagcccaa tcatcttgcg cgcggccacg
     8641 tagcgctggc gcaactcctg cacgtgtggc cagtcttcgg ccggcagcag gcaccacagc
     8701 gcgccccacg gatacacgcg atccagcccg gcacctgcgg caatggtgct gcgcagcgtc
     8761 gacgctgcgc catccgcagc tacgaccagg tcgaacgggc catgcgtgcg gccttcgccg
     8821 tcgcgcagac ggccctgttc ggcatccact ccggtaatcg tgatgccggc acgcaattgc
     8881 cctgcgccgt cccgcgcttc atccagcaac gagaacaacg ctccgcgctg catgcccagc
     8941 ccatgcaggc gcgcgtccag accgtcgtag cgcatgtcca tcaccgcgcg ctcgcacggc
     9001 gtatcgccgt acaggcggtg caccggtgca gcatgcgcgc gcacggcgtc gagcaggccc
     9061 atctgccaca gcacctgcag gccactgggc tgcagcagga agccggcgcc gaccggcccc
     9121 ggcgtgggca cgcgctcgaa aatgtccacc tcatgaccat cacgggtgag caggatggac
     9181 aatgcctgtc cagcggtgcc gtagccaata acggcgatgc gcagtcgttc cttcatgcct
     9241 gcattgtgcc cgaggccggc agaaggcgat cggaatgcag acggctgcgc aaaaaaaacc
     9301 ccgccggagc ggggttttca acgcactgtc gagtggatca ctcggccggc gtgatgttcg
     9361 aagcctgggc acccttcggg ccctgggtca cgtcataggt gacacgctgg ccttcctgca
     9421 ggctgcggaa gcccttggag ttgatggcgg agaagtgcgc gaacacgtcg gcgctgccat
     9481 cctccggcga gatgaagcca aatcccttgg cgtcgttgaa ccacttgacg gtaccgttcg
     9541 gcatggtgat gcgagacctt atgcaatgaa tgggtggtgt acgctgaacc cgcgcacaag
     9601 ctgagtatgc aaagcttgct cggggaagac aatcaccccc gtgccaattc gcccaccagt
     9661 tccggaagtc cgttgctggc cgcctgcacg ttggccagca cttcggccat cgtaatctcc
     9721 tcgccatctc cacagccggc ggcccagttg gcgatgatgg ccagacaggc gtaatccagc
     9781 cccagctccc gtgccagcgc ggcttccggc atgccggtca tgcccaccag gtcgcagcca
     9841 tcacggcgca tgcgggcgat ttcggcgatg gtttccaggc gcgggccctg cgtagcgccg
     9901 tagcagccac cgtcatggac cgtgacaccg gtcactttcg cggcggccag gatcttgctg
     9961 cgcagcatcg gcgtgtacgg atggccgaaa tcgacgtgga ccacgtcggt gccttcttct
    10021 tcacagacgg tgctgatgcg gccccaggtg tagtcaatga tctggtccgg gcaggccagc
    10081 acgcgcggac caaagtgttc ggtgatgcca ccgaccgtgt tcaatgccag cacccgctgc
    10141 gcgcccagct gctgcagcgc cgccaggttg gcgcggtagt tgatcttgtg cggcggcagc
    10201 gagtggcctt caccgtgccg tgccaggaac gccacgcgat ggccgagcag cgtccccacg
    10261 cgcaccgggc cggaggggcg gccgaagcgg gtgtcgacct cgtgggtctg cacgtcgtca
    10321 agcttggcca ggttgtagac accggtaccg ccgatcacgg ccagggcgat ctgttgcatt
    10381 cgaagcactc catgaaaaga caaacgccgg cacccgagga tgccggcggc agaagaacac
    10441 gcgccgcggg cggcggcgcc gttattcctt catcgcgtag atggccggca cgcagcgcag
    10501 ggtttcgttg acgtccatgc cgaagccgaa cacgtagcgg tccggcagtt cgatgccggc
    10561 gtagtcggcg accacgtccg gcagcgcgcg gtcgtgcttc ttcactgtca tcgcagcgat
    10621 gcgcacgtcg gtcgcgccct gctccaggca ccaggtgcgc acgccctgca gggtgtagcc
    10681 ctcgtcgagg atgtcgtcga tcagcagcac gcggcggccg aacagcgagg tggccggctt
    10741 gtgcttccag accaggtcgc cgccggtggt ctcaccgcgg tagcgggtgg cgtgcaggta
    10801 atcgaactgc acgtcctggc cgcgcgcgcc cagttccagc gccagctggc cggcgaacgg
    10861 cagcgcgccg tgcatgatcg acaggaacag cggcacctcg cccttgtaat cgcgcgcgat
    10921 ggcgtcggcg ataccagcga tggccttgtc gatggtgggg cggtcgacca gcaggtcagc
    10981 ctgggccagg gcctgggaaa tggtgaggtt gggcatcaga cggttcttcc aagggtttca
    11041 agcagacggg attgggtgtc gccatggcgg gcatcggcca gcaggccgtc ccagccgagc
    11101 gcgccgcggc caagcagccc cagcagcgca gcagtattga gggagcgtcc ctgcacggcg
    11161 tgcagggctt catcgaccag ttccgggtgg cagaccagca ccacgtcgca accggcatcc
    11221 aggtgtgcat gcacgcgcgc cggcacgccg ccggcactgt gcgaggcggc catgccgatg
    11281 tcgtcggaga acaccacgcc acggaagccg agctcgccgc gcaggatgtc ctggatccag
    11341 cgcggcgaat agccggccgg ttccggtgcc acctgcgggt agatcacgtg cgccatcatc
    11401 accgcatcgg caccggcggc gatgccggcc tggaacggca ccaggtcctg cgcacgcagc
    11461 tcgtccagcg cacgcgggtc gatcgcggtg tccacgtggg tgtcttccag caccgtgccg
    11521 tggccaggga aatgcttgag cgtggccgcc atgccaacgg cgtgcatgcc acgcacgtag
    11581 gcggcggtga acgcggccac cacctgcggg tcttcactga aggcgcggtt gccgatggca
    11641 cggttgccac ggccgaggtc gaccaccggc gcgaagctga ggtccacacc gctggcgcgc
    11701 acctcgctgg ccatcagcca ggcgtgctgc tcggccagcg ccagcgcccg ctgcggatcg
    11761 gtcgcgtaca gcgccccgat ctcctgcagc ggcggcagct cgctgtagcc ttcacgaaaa
    11821 cgctgcacgc ggccgccttc ctggtcgacg cagatcagct gcgggcgcgg ggcggcggcg
    11881 cggatcgccg cgctcagatc ggtcacctgc tggcgcgagg caaagttgcg cttgaacagc
    11941 accaccccgg ccacggcatc gtgctgcagc cagtcacgtt cctgggcggt cagttcggtg
    12001 ccggcaacgc cgatcagcag catggtcgat ctccacaacg cgcgcccgca tggcgcagtg
    12061 ccgcattgtc gcagaaccgg ccgacaggcg cagtggtcgc gaaaagggga cggaggggat
    12121 taagccgcaa tcggccctca cgagctggaa acgacttaat cccctccgtc cccttttcgg
    12181 ggctggtcag accttgcagc cgtccgggcc gcaggcctcg tcgccctctg ccggggacgc
    12241 ggatgtgccc tgctcggccg cgatctggcg cagcgcgttg gcgaacgcct ccggcggctg
    12301 ggcgcctgaa atggcccagc ggccgtcgat gacgaaggtc ggcaccgagg agatgcccag
    12361 tgcatgggct tcctgcagct ttgcctcgac ctccgccagg ccgcggtcgg aggccagcat
    12421 ctgggtgatc tcgcccgcgt cgaggccacc ggctacgcca gccttgacca gtaccgagct
    12481 gtcagccagg ttctggccca gctcgaaatg ggcgcggaac aacgcctcgc ccaccgcgtc
    12541 ctgcacccca tgctggccgg ccagccacag cacccggtgg gccggcagcg tggtcacccg
    12601 cacctggccc tggctgaagt ccatcggcag gccttcggcg cgcgccgtgg tctgggtctg
    12661 gttgaggatc tgctcggtgc gctcgacacc gccgaacttg cgcacatagg cctcgcgcag
    12721 cggcaccggc tttgcgtccg cgtccgggtc cagctggaac ggctgccagt ggatgtcgag
    12781 ttcaggcgca tcggcgccca gcaactgcac gccctgctgg aaacgatgct tgccgatcca
    12841 gcaccagggg cagaccacgt cggagtagat gtcgattctc atgcccacca catgggggcc
    12901 gcggccttcg aaaaaagggg acggagggga ttaagccgct ttccgcacag gcggggtaaa
    12961 gacgacttaa tcccctccgt ccccttttta ggggttcacc actgtgaata ggggtgacta
    13021 gcgagggcga cgttgtagta gcgggcgtca tcggtcactt cggcacccac ccagtccggc
    13081 aggtcgatga cctggtcggc gctgtccagc tcgacctcgg ccacgaccag gccggcgttg
    13141 tcgccgagga actcgtccac ttcccaggtc agcccggcgt ggtccaccag atggcgacgc
    13201 ttatcgatca gcccgcctac gcacagtgca agcagcgcgc gcgcgtcctc caccgggatc
    13261 gggtagtcga actcctgccg ggtatggccg atggtgcgcg acttcaggtt cagcgcagcg
    13321 cggtcgccct cgatacgcac gcgcaccgaa gcgttctggg tgccgcgatc gagtgcgccc
    13381 atgtcgttga tgtagccctg tgccatcggg atcacccggt gcgcggcggt gcgccagcca
    13441 tcgctgctga cgaggaattt gcgttcgatt tcgatgccca tcgcgccatt atgcgcgatg
    13501 ggcatgacag cccgtcagcg cttctcgaac accgcgatgc tttccacgtg tgcggtgtgc
    13561 gggaacatgt ccatggcacc ggcgctgacc agggtgaagc cctgttcgtt gaccaagtag
    13621 ccggcgtcac gcgccagcga gcccgggtgg cagcttacgt agacgatgcg cttgaactgc
    13681 ttcagcggca gctgctgcag cacttcgatc gcacccgaac gcggcgggtc gagcagcagc
    13741 ttgtcgaagc cctggcgcat ccacgcggtg ctgcgctggt cctgggtcag gtcggcactg
    13801 aagaactgcg cgttggccag gccgttgcgc tcggcattct cgcgggcacg cgcgaccagg
    13861 ccggcatcgc cttccacgcc gaccacttcg cgtacgcgac gggccagtgg cagggtgaag
    13921 ttgcccaggc cgcagaacag gtccagaacg cgctcatcct cgcccggctc caggaggtcc
    13981 agggcgtggg cgatcatctt ctcgttgagc ttggcgttga cctggatgaa gtccagcggg
    14041 cggaacgcca gctcgacatc ccacggtgcc agccggaacg acagcggcac gccctgcccg
    14101 tccagcggct gcacggtttc cacgccgccg gactgcaggt agatcacaaa accatgctgc
    14161 tggccgaagg cggcccaggc ggcgcggtcg gcatcgctga gcggctgcag gtgccgcacg
    14221 gtcaggacca cggcctggtc gccagcgatg aattcgatct gcgggatgtc acgcttgcca
    14281 tcgagcgatt cgatgaaggt ggacagggcc tcgaccttgg tgccgatctc cggaatcacg
    14341 gtcaggcact ggccgaggtc ggccacgaac cgcgggtcct gttcgcggaa accgaccagg
    14401 gtcttgtcct tcttctcgac ccggcgcacc gagaagcggc ccttgcggcg gtagccccag
    14461 ctctcgccga ccagcggcgc cagcacggtg cccggcttca cgtggccgat gcgctcgaga
    14521 ttgtccatca gcacgcgctg cttggcgacg atctgctggt cttcgtccag atgctgcagc
    14581 acgcagccag cacaggtgcc gaagtgcggg catttggggg tgacacgctg cggcgaggcc
    14641 tgcagcacct gtaccgtgcg cgcctcgtcg aaatggcggc tgcgggcggt ctgttccgcc
    14701 atcaccacct cacccggcaa ggcgccgctg atgaaggtga ccttaccgcc ctcgccttca
    14761 cggcgggcga caccgcgacc atcatggctg aggtcgagga tttcggtctg gaacggggta
    14821 cggtcgatgc gggagcggga tcgggccacg tggcgacagg ctgcgggcaa aaatggggcc
    14881 gtattgtcgc agatcctgac cggcagggtc cgcacccgct tgcgcccgtc gccgtcgtgc
    14941 ttgatgattg gaccagctga catggaggca gccctgatgc agatgacccc gcggaccagc
    15001 cggccccgct tcctgcttgt cgaggacgac atcatcagcc gcggtttttt caaggcggcg
    15061 ttggaaacgt taccagcgga tgtggacacc gcagactcac ttgccagcgc gctggccagc
    15121 gccgagcccg gcgcgcatga cctgtggctg atcgacgtca atctgcccga cggcaatggc
    15181 gcgcagctgc tgcgcgaact gcgccgttca caccccgata ccccggcgtt ggcgcatacc
    15241 gccgatggcg acacctccat tcatgcccgc ctgcgcgaag ccggtttcag cgacaccctg
    15301 gtcaaaccgc tgggccgcga ccagctgctg aaggcagtgc gccgggccct ggtgaacagc
    15361 ccggcgggaa tcttcgtggc ccaggccccg gcagcggtcg agctgcaggt gcaggactgg
    15421 gacgagaccg cggcattggc cgcactcaat ggccagcgca accacctgat cgcgctgcga
    15481 gaactgttcc tggccgagtt gcccggcgtg cgcgacgcgg tcgagcaggc ggtgcaccag
    15541 catgacgagc ggcaactgcg cagccagttg catcggctgc aggcgagttg cggcttcgtg
    15601 ggtgcggcac ggctgggccg ggcggtgcgc cagctgcatc atgcgcccga gtcggggcag
    15661 gcccaggacg ggttccgcgc cgcagtggct gccctgctgc actgaggggt gttcggcagg
    15721 gcttgcagcc ctgcacctgc cgaggccaaa gcaacagcaa cagcaggcta tccgagggat
//
LOCUS       DAOKIP010000086        15636 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.086,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000086 DAOKIP010000000
VERSION     DAOKIP010000086.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 15636)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15636)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15636
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.086"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            253..2352
                     /locus_tag="QEL58_002223"
     CDS             253..2352
                     /locus_tag="QEL58_002223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005408020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chitinase"
                     /protein_id="HDS1676684.1"
                     /translation="MYDPIVRSAERPTRSCRPRRLAWLLALAAGSVALPGLAQAASCA
                     GVAQWDQAKIYRAGDTLQKGGVLYRANQDIWNAPPDHPAGAPYYTNLGACDGSGSNQP
                     PVVSLTSPANGATFSAGSTVNVTANASDPDGSVAKVEFFRDGSSLGIATNAPYAASWA
                     NASAGSHTLRAVATDNNNATTSTPTITITVNAAGGDTTAPSVPGGLAVGTRTANSIAL
                     SWSPSTDNTGGSGVAGYDVYRNGSLVGSPSSASYVDGGLTASTTYRYRVRARDNAGNA
                     SAQGTEISATTLAGDGGTTGKRVIGYFTQWGIYGRNYRVKNIDSSGSAARLTHINYAF
                     GNVRNNRCEVGITQPSDPNSGAGGDAFADYTKAFSAAESVSGSADTWDQPLRGNWNQL
                     KQLKAKYPGMKVLISLGGWTWSRGFSSAARPENRQAFVASCIDAYIKGNLPVTDGAGG
                     AGAALGVFDGIDIDWEYPVACGIECGKPEDNANFTALMAEFRRQLDAVRPGLLLTVAV
                     GAGIDKIRVTDPAAYHPYLDYINVMTYDFHGAWDAKTNHQSALFDSPNDPSTGDQKLY
                     NSNDAIEAFISRGVPAAKLNLGIGYYGRGWTGVANANNGLYQTATGAAPGTYEAGIED
                     WKVLKNLAWPGYTDNTAGATWIYNGSTLWSFDTPANITRKMGYVKTQGLGGAFVWEFS
                     GDDAQGTLTKAVSDGLK"
     gene            complement(2468..3256)
                     /locus_tag="QEL58_002224"
     CDS             complement(2468..3256)
                     /locus_tag="QEL58_002224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010480725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin fold domain-containing protein"
                     /protein_id="HDS1676685.1"
                     /translation="MLRFAIAAVLGALSLTACAQPAPPAAKAPAAAAAAKAGPVANAS
                     ADQAVRAALTALNPGFQVDYIGAAPFPGFREVVVSGQLLYVSDDGRYLFQSQPYDTRA
                     KGPANSEGLLGYRRDLLAKANHGDRIVFAAPNAKYTISVFTDIECGYCRKLHQDIAEL
                     NRNGISVEYLAFPRMGLGSKDYTDMISVWCAADRRQALTNAKRGGSVPAKNCTNPVAM
                     QYALGQQLGVNGTPAIFAPDGTQLGGYLPPAQLRAALEKLSAKR"
     gene            complement(3357..4334)
                     /gene="xerD"
                     /locus_tag="QEL58_002225"
     CDS             complement(3357..4334)
                     /gene="xerD"
                     /locus_tag="QEL58_002225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005412197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific tyrosine recombinase XerD"
                     /protein_id="HDS1676686.1"
                     /translation="MALVSTPAERRQLVQQLPELRGDDSARIQRFLDAIWAENGLARA
                     TLDSYRRDLEGLARWMDGRDGGLAGIERPGLFDYLAWRTRHGWSPRSNARLLSALRAF
                     FADGVRRGERSEDPSALLDPPKLPRLLPKALAESQIDALLAAPDIDSALGLRDRAMLE
                     LMYAAGLRVSELVLLPATAVNLRQGVLRVTGKGSKERLVPLGEESQHWLERYLQQSRP
                     QLVGKGRVHALADGQTPLFIEPTLHALTRQAFWHLVKRHAQVAGIDPARISPHGLRHS
                     FATHLLNRGADLRALQMLLGHSSLSTTQIYTLVAREHLQKLHARHHPRG"
     gene            4391..4882
                     /locus_tag="QEL58_002226"
     CDS             4391..4882
                     /locus_tag="QEL58_002226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010480723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HDS1676687.1"
                     /translation="MSRPATDTAPAAATGMPRPRALLVWRVLAMVYDALPVLALWMLA
                     GTLFTLAYTLSGHAQRENIAPFSAWQWLLWAVCWAVTGGYATASWRRGGQTLGMRPWR
                     LKLESSDGTPLRRAQLWLRFAVGTLSLLLAGLGFWWAWVDPQRLTWHDRASATRLVRM
                     PKR"
     gene            complement(4997..6103)
                     /gene="lptG"
                     /locus_tag="QEL58_002227"
     CDS             complement(4997..6103)
                     /gene="lptG"
                     /locus_tag="QEL58_002227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005415214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter permease LptG"
                     /protein_id="HDS1676688.1"
                     /translation="MRLRPMRFDLYLGRTVFTTVLLTWAVLVGLDVVMAFSGEFKDIG
                     KNGYTLGHAAAWVLYTVPRRAYTMFPTAAVIGALMGLGQLAATSELTALRALGLSRRR
                     LSVSVAIALSLLTAVMVFSAETLGPWGQDRADALKASAKWGRDIATTRYAGLWAREGD
                     TFLSAAGGEEQLVGDKGTRLILREVRLYRIAEDGRIASITHAATAEHDRDGWVLTSVS
                     RDTFGERSATRQEVAREPWNSRLDAGALAAGIAKPRNLRITELRASIEYRERNGLDAR
                     DFEDIYWSRWFYPLNVLALCLAAVPFAFGSLRSGGMGKRLFLGILFALGFWLLQLFFG
                     RMAGALKFDYRIAYALPPIVMLAVSGLLFRRKSG"
     gene            complement(6100..7182)
                     /gene="lptF"
                     /locus_tag="QEL58_002228"
     CDS             complement(6100..7182)
                     /gene="lptF"
                     /locus_tag="QEL58_002228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter permease LptF"
                     /protein_id="HDS1676689.1"
                     /translation="MLKLDRYLLGDFVQSFLATLIVLLVVSVGGVLVDILGNIADGRL
                     PAKLLFSQLGLQFIAYLPLILPLALMLGLLLAIARLYRDSEMAVITAIGVGPKRLLRP
                     LLMLVVPVVLLVGACSLWLGPWAGRVAEQMIIEANRSVLMAGLEPGRFTPLPNGGVVY
                     LSSISADGIELGKVFMQRQKDDRIEVVSAAGGRMFFEGARQRFLELDDGHQVEGPAVG
                     GLDYRLATFARNDVALPDGAQTRTEDDPELMPTLQLIGDGRPQAQAQLHRRLAPPLIA
                     LAFALLTVPLGRSSPRQQRYGRMMLALMAYMVGTNLMFIGSGWIATGKIPAALGLWWL
                     TLPLLALSIWMYARDGRLGRPKGARA"
     gene            7287..8765
                     /locus_tag="QEL58_002229"
     CDS             7287..8765
                     /locus_tag="QEL58_002229"
                     /EC_number="3.4.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010480720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl aminopeptidase"
                     /protein_id="HDS1676690.1"
                     /translation="MALEFTLNHVAPAAATVDCLVVGAYADHTLTPAAKALDAASGGR
                     LAALAQRGDLSGKTGATTLLHDLPGVSAPRVLVVGLGEAARFGVPQYLKAIGDAVRAL
                     KAGATRSALFTLSEVAVKDRDAAWAIRQAVIAADHAAYRYTATLGKKKADDAGLAQLA
                     IAGDDAQALAQGQAIAAGVEFARELGNLPPNYCTPAYLAEVGVKFAGEHDGAEAEILD
                     ETQMEALGMGSLLAVARGSANRPRLVVLKWTGAGDAKPYVLVGKGITFDTGGVNLKTQ
                     GGIEEMKYDMCGGANVIGTFVAAVKAKLPLNLVVVVPAVENAIDGNAYRPSDVITSMS
                     GKTIEVGNTDAEGRLILCDALTYAQRFEPAALVDVATLTGACMVALGHQTAGLMSKHD
                     DLANELLAAGEHVFDRAWRLPLWDEYQPMLDSTFADVYNIGGRWAGAITAGCFLSRFA
                     EGQRWAHLDIAGVASDEGKRGMATGRPVGLLSQWLLDQVARA"
     gene            8848..9273
                     /locus_tag="QEL58_002230"
     CDS             8848..9273
                     /locus_tag="QEL58_002230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016902887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit chi"
                     /protein_id="HDS1676691.1"
                     /translation="MPRADFYLIAKPRFLTEPLRLVCELARKANDAGLFTLVLARDQA
                     QAEELDELLWAFDDDAYIPHQIAGEDMDEEEALVLIAVPGTEAPARPLVINLRDDPWL
                     GQCERVLEVVPADPEAREPLRERWRQYKAAGYDLNKHDM"
     gene            9346..12174
                     /locus_tag="QEL58_002231"
     CDS             9346..12174
                     /locus_tag="QEL58_002231"
                     /EC_number="6.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012479102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="valine--tRNA ligase"
                     /protein_id="HDS1676692.1"
                     /translation="MTQLASSYDPKSFETDLYEAWEKAGHFKPSGTGEPYTILLPPPN
                     VTGTLHMGHAFQQTLMDALVRYHRMRGYDTLWQVGTDHAGIATEMVVSRNLALEGKGE
                     TRDSLGREGFIGKVWEWKQQSGDTIERQMRRLGTSADWSRSTFTMDPQPSAAVNEAFV
                     RWYEQGLIYRGQRLVNWDPVLKTAISDLEVESAEEDGFLWSIAYTLDEGLSYEHVERD
                     ADGVETLRETRDYLVVATTRPETLLGDTAVMVHPEDERYAHLIGKSVVLPLTGRRVPV
                     IADDYVDRAFGTGVVKVTPAHDFNDYEVGVRHSLPMINLFTPVAALNENAPERFQGLD
                     RYEARKAVLAELEDLGILVETRAHKLQVPRGDRTGQVIEPYLTDQWFVKMDDLAKRGL
                     ELVEDGSISFVPPNWINTYRHWMNNIQDWCISRQLWWGHRIPAWFDAATGSCYVGRSE
                     AEVRAKHNLGSDVVLNQESDVLETWFSSQLWPFSTLGWPNEQAMAERGFDRYLPSSVL
                     ITGFDIIFFWVARMIMATDNLVGKIPFKDVYFTGLIRDGQGQKMSKSKGNVLDPLDII
                     DGITIDDLVAKRTGGLMQPKMVEKIEKATRKEFPDGIAAHGADALRFTIAALATHGRD
                     IKFDMNRAEGYKNFCNKLWNASRFALMNTEGAAFSGVPTPRTDAERWILARLAATTAE
                     AQGHFAAYRFDLLAQCLYEFAWNAFCDWFLELSKPALSGGDAADAESTRHTLLYVLEA
                     LLRLLHPLTPFITEQLWQQLAPRLGLAETTLSLRPYPTAAEFEGDFAQAEADVEWLKA
                     VISAVRRVRSELNVAPSKLVPLRLQAGLEQDRVRIERFSASLSFLLKLDSIQWLAEGE
                     SAPAAAAAIIGELKLLVPLEGLVDLDAERVRLDKEIARVDAEKEKSETKLAKFTDKVP
                     PAVVEQERVRLVDWNTQLAGLREQRAKL"
     gene            12309..13130
                     /locus_tag="QEL58_002232"
     CDS             12309..13130
                     /locus_tag="QEL58_002232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005412191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HDS1676693.1"
                     /translation="MPLSIFLLVLAAAALHASWNAIVKRGPDKFLGTVLVTGSAALLS
                     ATALPFLPFPAAHSWPWLGASVLLQVTYYGLVARCYQQVDMSLAYPLMRGSAPILVAL
                     AGTLLGEGLPPVAWLGVVLVSTGILCMALGARGGQLRLPLLTAAMIATYTLVDAQGAR
                     QSGSALSYTLWLFLLSGIPLPLWALYTRRGAVLAYARQHWPLGMAGGVGTTASYAMAL
                     WAMTQAPVAMVSALRESSILFALLISVFALRERVPRVRWLAASLIVGGVLALRLA"
     gene            complement(13273..13770)
                     /gene="rimI"
                     /locus_tag="QEL58_002233"
     CDS             complement(13273..13770)
                     /gene="rimI"
                     /locus_tag="QEL58_002233"
                     /EC_number="2.3.1.266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004142288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosomal protein S18-alanine
                     N-acetyltransferase"
                     /protein_id="HDS1676694.1"
                     /translation="MSAVSQPGPVSLRALRESDLNAVMAIEVRGYPFPWTRGIFVDCL
                     RAGYPGLAMERDGLLIGYGVLSIAADEAHVLNVCIDPSTQSRGLGRQLLRALVQLAGD
                     RGAQRVFLEVRPSNAPALALYHSEGFNEIGRRPRYYPAAQGREDALVMAIELVDGDLQ
                     AMPPL"
     gene            complement(13767..14222)
                     /locus_tag="QEL58_002234"
     CDS             complement(13767..14222)
                     /locus_tag="QEL58_002234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014506580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676695.1"
                     /translation="MGYTVYHDGQLAAELDAALQLSVAEAEAAAVPPTQPARASAASS
                     SGERRAEAVPSPGLQRPAPPRRETPVNAPDTAPASARPLPAGNARQPVVRLPDRLQIA
                     LLRASGCNPNDPATQALMDSWPLDQLRHDPAAKRALWPQLRALRKRGAP"
     gene            complement(14276..15052)
                     /gene="pssA"
                     /locus_tag="QEL58_002235"
     CDS             complement(14276..15052)
                     /gene="pssA"
                     /locus_tag="QEL58_002235"
                     /EC_number="2.7.8.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004142286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--serine
                     O-phosphatidyltransferase"
                     /protein_id="HDS1676696.1"
                     /translation="MDPITPPPRSRTIYLLPNLFTTAGLFAGFYAIIAAANGDFVNAS
                     IAVFVAAVMDGLDGRVARLTGTSSEFGVQYDSLADLVSFGMAPALVMYHWSLSWLKFD
                     DPLLGRVGWAVAFLYAACAALRLARFNTQVAVVDKRWFVGLASPAAAGLMMSFVWAFA
                     DGNLGWDGNQLRYVALAVTIIAALLMVSRIRFWSFKGGAAKGTRSDRVPFLVLALVPV
                     AIAIAVIDLPRVLFAVGILYALSGPVMWAVQRLRKKPEAA"
     gene            15133..15507
                     /locus_tag="QEL58_002236"
     CDS             15133..15507
                     /locus_tag="QEL58_002236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4124 domain-containing protein"
                     /protein_id="HDS1676697.1"
                     /translation="MRALSCLGCLLLLASAHAVAGPVYKWKDANGVTQYSETPPAGKK
                     FETREQARSPQAAASTETPAAPVPEQCSTARANLALLEGSGQVMQDTNGDGKPDTALT
                     PEQRTAQKGLADAAIKAYCPAE"
BASE COUNT         2623 a         5446 c         5254 g         2313 t
ORIGIN      
        1 ccacgagggg gctccgccga tggccgccga ccgcgcgcag cgccgctctc cagccgaatc
       61 cccgaaccat gcactcgctc acggattgac cacacgattg atgacaacgt tgtccccacc
      121 tggcgccgga ctctctcccc ggcctcccag gtaccccgtc cgccccctcc gtcgccttcc
      181 cgggcgacgc ccggacctgc gtcacgcgcg gcgccatcgg ggcccgcgcg ccctttgatc
      241 ggagacttac ccatgtacga cccgattgtg cgcagtgccg aacgtccgac ccgtagctgt
      301 cgtccccgcc gcctggcctg gctgcttgcc ctggccgccg gcagcgtcgc cctgcccggc
      361 ctggcgcagg ccgccagctg tgccggggtg gcccagtggg accaggccaa gatctaccgg
      421 gccggcgata ccctgcagaa aggaggcgtc ctctatcggg cgaaccagga catctggaac
      481 gcgccgccgg accatccggc cggcgcgccc tactacacca acctgggtgc ctgcgatggc
      541 agtggcagca accagccgcc ggtggtcagc ctgacctcgc cggccaacgg tgccaccttc
      601 agcgccggca gcacggtgaa cgtgaccgcc aacgccagcg atccggacgg cagcgtcgcc
      661 aaggtcgagt tcttccgcga cggcagctcg ctgggcatcg ccaccaacgc gccgtatgca
      721 gccagctggg ccaatgccag cgccggcagc cacacgctgc gtgcggtggc caccgacaac
      781 aacaatgcca ccaccagcac gccgaccatc accatcaccg tcaacgccgc cggtggcgac
      841 accaccgcgc cgagcgtgcc gggcgggctg gcagtcggca cccgtaccgc caacagcatc
      901 gcgctcagct ggagcccgtc caccgacaac accggcggca gcggcgtggc cggctatgac
      961 gtgtaccgca acggcagcct ggtcggctcg ccgtccagcg ccagctatgt cgatggcggg
     1021 ctgaccgcat cgaccaccta ccgctaccgc gtgcgtgccc gcgacaacgc cggcaatgcg
     1081 tcggcacagg gcaccgagat cagtgccacc acgctggccg gcgacggcgg cactaccggc
     1141 aagcgggtca tcggttactt cacccagtgg ggcatctacg gccgcaacta ccgggtcaag
     1201 aacatcgaca gcagtggctc ggccgcgcgc ctgacccaca tcaactatgc gttcggcaac
     1261 gtgcgcaaca accgctgcga agtgggcatc acccagccgt cggatccgaa cagcggtgcc
     1321 ggtggcgatg ccttcgccga ttacaccaag gcattcagtg ccgccgagag tgtcagcggc
     1381 agcgccgata cctgggacca gccgctgcgc ggcaactgga accagctcaa gcagctcaag
     1441 gccaagtatc cgggcatgaa ggtgctgatc tcgctgggtg gctggacctg gtcgcgcggc
     1501 ttctccagcg cggcccgccc ggaaaaccgc caggccttcg tcgcctcgtg catcgatgcc
     1561 tacatcaagg gcaacctgcc ggtgaccgac ggtgccggtg gtgccggtgc cgcactgggc
     1621 gtgttcgacg gcatcgacat cgactgggaa tacccggtgg cctgtggcat cgaatgcggc
     1681 aagccggaag acaacgccaa cttcaccgca ctgatggccg agttccgccg ccagctcgat
     1741 gcggtgcgtc cgggcctgtt gctgacggtg gcagtgggtg cgggcatcga caagatccgc
     1801 gtcaccgatc cggccgcgta ccacccgtac ctggactaca tcaacgtgat gacctacgac
     1861 ttccacggtg cgtgggatgc gaagaccaat caccagtcgg cgctgttcga ttcgccgaat
     1921 gatccgtcca ccggcgacca gaagctgtac aacagcaacg atgccatcga ggccttcatc
     1981 agccgcggcg tgcccgctgc aaagctcaac ctgggcatcg gctactacgg gcgtggctgg
     2041 accggcgtgg ccaacgccaa caacggcttg taccagaccg caaccggcgc cgcaccgggg
     2101 acctacgagg ccggcatcga agactggaag gtgctgaaga acctggcgtg gccgggctac
     2161 accgacaaca ccgccggtgc cacctggatc tacaacggca gtacgctgtg gagcttcgac
     2221 accccggcca acatcacccg caagatgggt tacgtgaaga cccagggcct gggcggcgcg
     2281 ttcgtctggg agttcagtgg tgacgatgca cagggcacgc tgaccaaggc ggtcagtgat
     2341 ggcctgaagt aaggaaaaag ccgggggcgc attgtgcgcc cccggcccct gatctgtagc
     2401 gccgagccat gctcggctgt cacatgtgga accgcagtcg agcatggctc gacgctacag
     2461 ttccgcgtca gcgcttggcc gacagctttt ccagcgctgc gcgcagctgt gccggcggca
     2521 ggtagccacc cagctgggtg ccatcggggg cgaagatcgc cggcgtgccg ttcacgccca
     2581 gctgctggcc cagcgcgtac tgcatggcca ccgggttggt gcagttcttg gcaggcacgc
     2641 tgccaccgcg cttggcattg gtcagcgcct ggcgacgatc ggccgcacac cagaccgaga
     2701 tcatgtcggt gtaatccttg ctgcccaggc ccatgcgcgg gaacgccagg tactcgacgc
     2761 tgatgccgtt gcggttcagt tcggcaatgt cctggtgcag cttgcggcag taaccgcatt
     2821 cgatatcggt gaacacgctg atggtgtact tcgcgttcgg cgcggcaaac acgatgcggt
     2881 caccatggtt ggccttggcc agcaggtcgc ggcggtagcc gagcaggcct tcgctgttgg
     2941 ccgggccctt ggcacgggtg tcgtagggct gcgactggaa caggtaacgg ccatcgtcgg
     3001 agacgtacag cagctggccg gaaacgacga cctcgcggaa gcccgggaac ggcgcagcac
     3061 cgatgtagtc cacctggaag cccggattga gcgcggtcag cgccgcacgc acggcctggt
     3121 cggccgacgc attggctacc ggaccggcct tggccgccgc ggcggcagca ggtgccttgg
     3181 cggccggcgg ggccggctgg gcgcaggcgg tcaggctgag cgcaccgagc acggcggcga
     3241 tggcaaatcg aagcatggag cggtccgcga cagaagaaga ccccggattc tgacacagcc
     3301 gcccgcagcg ggccgcgacg ccgcgcacgg cccggggccg ggattcagcc gccggctcag
     3361 ccgcgcgggt gatggcgggc gtgcagcttc tgcaggtgtt cgcgggccac cagggtgtag
     3421 atctgggtgg tcgacagcga actgtggccc agcagcatct gcagcgcgcg caggtcggcg
     3481 ccgcgattga gcagatgggt ggcgaagctg tggcgcaggc catgcggact gatccgcgcc
     3541 ggatcgatcc ccgcgacctg ggcgtggcgc ttgaccagat gccagaacgc ctgccgggtc
     3601 agtgcgtgca gcgtcggctc gatgaacaac ggcgtctgcc catcggccag ggcgtgcacc
     3661 ctgcccttgc cgaccagctg cggccgcgac tgctgcaggt agcgctccag ccagtgctgc
     3721 gattcctcgc ccagtggcac caggcgttcc ttgctgccct tgccggtgac ccgcagcacg
     3781 ccctggcgca ggttgaccgc ggtggccggc agcagcacca gttcgctcac gcgcagccct
     3841 gcggcataca tcagttcgag catggcccgg tcgcgcaggc ccagtgcgct gtcgatgtcc
     3901 ggcgccgcca gcagtgcatc gatctggctt tcggccagcg ccttgggcag cagacgtggc
     3961 agtttcggtg ggtccagcaa cgcgctgggg tcttcactgc gttcgccacg gcgtacgcca
     4021 tcggcgaaga acgcacgcag cgccgacagc aggcgcgcat tgctgcgcgg cgaccagcca
     4081 tggcgggtgc gccaggccag gtagtcgaac agcccgggac gctcgatgcc ggccaggcca
     4141 ccgtcgcgcc catccatcca gcgcgccagc ccttccaggt cgcgccgata gctgtcgagg
     4201 gtggcgcggg ccaggccgtt ctcggcccag atggcatcga ggaagcgctg gatgcgcgcg
     4261 ctgtcgtcac cgcgcagctc gggcagctgc tggaccagct ggcggcgttc ggcaggagtg
     4321 gaaacaaggg ccatgggtga aggatacgag ggtgccagcg gatgcggcca gcattgcgta
     4381 tgctcggcgc atgtcccgcc ccgccaccga cacggcccct gcggccgcta ctggaatgcc
     4441 gcgcccgcgc gccctgctgg tctggcgcgt gctggccatg gtctacgacg cactgccggt
     4501 gctggcactg tggatgctgg caggcacgct gttcaccctg gcctacaccc tcagcggcca
     4561 cgcgcagcgc gagaacatcg ccccgttcag tgcctggcag tggctgctgt gggcggtgtg
     4621 ctgggctgtg acgggcgggt atgcaacggc cagctggcgc cgcggcggcc agacgctggg
     4681 catgcggcca tggcggttga agctcgaatc gagcgatggc acgccgctgc ggcgcgcgca
     4741 gctgtggctg cgcttcgcgg tgggcacgct gtcactgctg ctggctgggc tggggttctg
     4801 gtgggcatgg gtcgaccccc agcggctgac ctggcacgac cgcgccagcg ccacccggct
     4861 ggtgcggatg cccaagcgct gacgcgcatt ctgtagcgtc gagccatgct cgactgcctt
     4921 ctgtgtagag tcgagccgtg ctcgactcac gcgcggagct cagaaagcag ccgggccacg
     4981 cccggcgctg catcactcag cccgacttgc gccggaacag caatccggac accgccagca
     5041 tcacgatcgg cggcaacgca taggcaatgc ggtagtcgaa cttcagcgcg ccggccatgc
     5101 ggccgaagaa cagctgcagc agccagaagc ccagtgcgaa caggatgccc aggaacaggc
     5161 gcttgcccat gccgccgctg cgtagcgaac cgaacgcgaa cggcaccgcg gccaggcaca
     5221 gcgccagcac gttcaacggg tagaaccagc ggctccagta gatatcctcg aaatcacggg
     5281 catccaggcc gttgcgttcg cggtactcga tgctggcccg caactcggtg atcctcaggt
     5341 tgcgcggctt ggcgatcccc gcggccagcg cgccggcatc caggcgggaa ttccacggct
     5401 cccgtgccac ttcctggcgc gtggccgagc gctcgccgaa cgtatcgcgg ctcacgctgg
     5461 tcagcaccca gccgtcacgg tcatgctcgg cggtggcggc atgggtgatc gaggcgatcc
     5521 gtccatcctc ggcgatgcga tacaggcgca cctcacgcag gatcaaccgc gtgcccttgt
     5581 cgcccaccag ctgctcctcg ccgccggcag cgctgaggaa ggtgtcgccc tcacgtgccc
     5641 acaggcccgc gtaacgggtg gtggcgatgt cccggcccca cttggcgctg gccttcagcg
     5701 catcggcgcg gtcctggccc cacggtccca gcgtctcggc gctgaacacc atcacggcgg
     5761 tcagcagtga cagcgcgatc gccaccgaca cgctcaaccg cctgcgcgac aggcccagcg
     5821 cgcgcagtgc ggtcagttcc gaggtcgcag ccagctggcc cagccccatc aacgcgccga
     5881 tcaccgcagc cgtggggaac atcgtgtagg cccggcgcgg cacggtgtac agcacccagg
     5941 ccgccgcgtg ccccagcgtg tagccgttct tgccgatgtc cttgaactcg ccggagaagg
     6001 ccatcaccac gtccaggccc accagcaccg cccaggtcag cagcaccgtg gtgaacaccg
     6061 tccggcccag gtacaggtcg aaacgcatcg ggcgcagcct catgcgcggg ctcccttcgg
     6121 tcggcccagg cggccatcac gtgcatacat ccagatcgac agcgccagca gcggcagggt
     6181 caaccaccac aggccgagcg cggccggaat cttgccggtg gcgatccagc cactgccgat
     6241 gaacatcagg ttggtcccca ccatgtaggc catcagggcc agcatcatcc gcccgtagcg
     6301 ctgctggcgc ggcgagctgc ggcccagcgg tacggtcagc agggcaaagg ccagtgcgat
     6361 caacggcggc gccaggcggc ggtgcagctg ggcctgcgcc tgcgggcgcc catcgccgat
     6421 cagctgcagg gtcggcatca gttccggatc atcttctgtc cgggtctgcg cgccatcagg
     6481 cagggccaca tcgttgcggg cgaaggtggc cagccggtaa tccagcccgc ctacggccgg
     6541 gccttccacc tggtgcccgt cgtccagctc gaggaagcgc tggcgggcgc cttcaaagaa
     6601 catccggcca cctgcggcgg acaccacctc gatgcggtca tccttctgcc gctgcatgaa
     6661 caccttgccc agctcgatgc cgtcagccga gatcgaagac aggtagacca cgccgccatt
     6721 gggcaaggga gtgaaccggc ccggctccag gccggccatc agcacgctgc ggttggcttc
     6781 gatgatcatc tgctcggcca cccggccggc ccacgggccc agccacagcg agcaggcacc
     6841 gaccagcagc accaccggca ccaccagcat cagcagcggc cgcagcaggc gcttggggcc
     6901 gacgccaatg gcggtgatca ccgccatttc cgagtcgcgg tacaggcggg cgatggccag
     6961 cagcaggccc agcatcagtg ccagcggcag gatcagcggc aggtaggcga tgaactgcag
     7021 gcccagctgc gagaacagca gcttggccgg caggcgtccg tcggcaatgt tgccgaggat
     7081 gtccaccagg acgccgccca cgctgaccac gagcaggacg atcagggtag cgaggaaact
     7141 ctggacgaaa tcgcccagca ggtatcggtc gagcttcaac atggggcggt ggtttaaact
     7201 ctggggttcg ttcgcggtgc cgcccagtct actgtctggg cgtaaacggt ccgcgattgt
     7261 acggacttgc caatggaatc tgctcaatgg ccctcgaatt caccctgaac cacgttgctc
     7321 cggccgccgc caccgttgat tgcctggtgg tcggcgcgta tgccgaccat accctgactc
     7381 cggccgcaaa ggcactggac gccgccagcg gcggtcgcct ggccgccctg gcccagcgcg
     7441 gcgacctgtc cggcaagacc ggcgccacca ccctgctgca cgacctgccg ggggtgtcgg
     7501 ccccgcgcgt gctggtggtc ggcctcggtg aggccgcccg tttcggcgtg ccccagtacc
     7561 tgaaggccat cggcgacgcc gtgcgcgcgc tgaaggccgg tgccacccgc agtgcactgt
     7621 tcaccttgtc cgaggtggcg gtgaaggacc gcgacgccgc ctgggcgatc cgccaggccg
     7681 tgatcgccgc cgatcacgct gcctaccgct acaccgccac cctgggcaag aagaaggccg
     7741 acgatgccgg cctggcgcag ctggccattg ccggtgacga cgcccaggcc ctggcccagg
     7801 gccaggccat cgccgccggt gtcgagttcg cccgcgaact gggcaacctg ccgccgaact
     7861 actgcacccc ggcctacctg gccgaagtgg gcgtgaagtt tgccggcgag cacgacggcg
     7921 ccgaggccga gatcctggat gagacccaga tggaagcgtt gggcatgggc tcgctgctgg
     7981 ccgtggcccg tggttcggcc aaccgcccgc gcctggtcgt gctgaagtgg accggcgccg
     8041 gcgacgccaa gccgtacgtg ctggtcggca agggcatcac cttcgatacc ggcggcgtca
     8101 acctgaagac ccagggcggc atcgaggaga tgaagtacga catgtgcggt ggcgccaacg
     8161 tcatcggcac cttcgtcgcc gcggtcaagg ccaagctgcc gctgaacctg gtggtagtgg
     8221 tcccggcggt ggaaaacgcc atcgacggca acgcctaccg tccgtccgac gtgatcacct
     8281 cgatgtcggg caagaccatc gaagtcggca acaccgacgc cgaaggccgc ctgatcctgt
     8341 gtgacgcgct gacctatgcg cagcgtttcg agccggccgc gctggtcgac gtcgccaccc
     8401 tgaccggtgc ctgcatggtc gccctgggcc accagaccgc tggcctgatg agcaagcacg
     8461 acgacctggc caacgagctg ctggccgccg gcgaacacgt gttcgaccgc gcctggcgcc
     8521 tgccgctgtg ggacgagtac cagccaatgc tggattcgac tttcgccgac gtctacaaca
     8581 tcggcggccg ctgggccggt gcgatcaccg ccggctgctt cctgtcgcgc ttcgccgaag
     8641 gccagcgctg ggcacacctg gacatcgccg gcgtggccag cgatgaaggc aagcgcggca
     8701 tggccaccgg ccgcccggtc ggcctgctga gccagtggct gctggaccag gtcgcccgcg
     8761 cctgatgccg tacccgaccc tggccggcca ccgccggcca gggcctcgcc cggcaacgcc
     8821 gggcccctgc ctgacccgga ccctgccatg ccccgcgccg acttctacct gatcgccaag
     8881 ccccgcttcc tgaccgagcc gctgcgcctg gtctgcgagc tggcgcgcaa ggccaacgac
     8941 gccgggttgt tcaccctggt gctggcccgt gaccaggccc aggccgagga actggacgaa
     9001 ctgctgtggg cgttcgatga cgacgcctac atcccgcacc aaatcgccgg cgaggacatg
     9061 gacgaggaag aagccctggt gctgatcgcg gtgcccggca ccgaggcccc ggcccgcccg
     9121 ctggtgatca acctgcgcga cgatccctgg ctgggccagt gcgagcgcgt gctggaggtg
     9181 gtcccggccg acccggaagc gcgcgaaccg ctgcgcgaac gctggcgcca gtacaaggcc
     9241 gccggttacg acctgaacaa gcacgacatg taagcacgcg ccggccccct tgatgggccg
     9301 ccgccgtgcc ctgatccttc aacgattgcc tcctggttcc cccgcatgac ccaactcgcc
     9361 tccagctacg acccgaagtc cttcgagacc gacctctacg aggcctggga gaaggccggc
     9421 cacttcaagc cgtccggcac gggcgagccg tacaccatcc tgctgccgcc gccgaacgtg
     9481 accggcaccc tgcacatggg ccatgccttc cagcagacgc tgatggatgc gctggtgcgt
     9541 taccaccgca tgcgcggcta cgacacgctg tggcaggtgg gtaccgacca cgccggcatc
     9601 gccaccgaaa tggtggtcag ccgcaacctg gcgctggaag gcaagggcga gacccgcgat
     9661 tcgctgggcc gcgaaggctt catcggcaag gtctgggagt ggaagcagca gtccggcgac
     9721 accatcgagc gccagatgcg ccgcctcggc acctccgccg actggtcgcg cagcaccttc
     9781 accatggacc cgcagccgtc ggcagcggtc aacgaagcct tcgtgcgctg gtacgagcag
     9841 ggcctgatct accgtggcca gcgcctggtc aactgggacc cggtgctgaa gaccgcgatt
     9901 tccgacctgg aagtggagag cgccgaggaa gacggcttcc tgtggtcgat cgcctacacc
     9961 ctggatgaag gcctgagcta cgagcacgtc gagcgcgatg ccgacggcgt ggaaaccctg
    10021 cgcgagaccc gcgactacct ggtggtcgcc accacccgcc cggaaaccct gctgggtgat
    10081 accgcggtga tggtgcaccc ggaagacgag cgctatgcgc acttgatcgg caagagcgtg
    10141 gtgctgccgc tgaccggccg ccgcgtgccg gtgatcgccg acgactacgt cgaccgtgcg
    10201 ttcggcaccg gcgtggtcaa ggtcaccccg gcgcacgact tcaacgatta cgaagtgggc
    10261 gtgcgccaca gcctgccgat gatcaacctg ttcaccccgg tggcggcgct gaatgagaat
    10321 gccccggaac gattccaggg cctggaccgc tacgaagcgc gcaaggccgt gctggccgaa
    10381 ctggaagacc tgggcatcct ggtcgagacc agggcgcaca aactgcaggt gccgcgcggc
    10441 gaccgtaccg gccaggtgat cgagccgtac ctgaccgacc agtggttcgt gaagatggac
    10501 gacctggcca agcgtggcct ggaactggtc gaggacggca gcatttcctt cgtgccgccg
    10561 aactggatca acacctaccg ccactggatg aacaacatcc aggactggtg catcagccgc
    10621 cagctgtggt ggggccaccg catcccggcc tggttcgatg ccgccaccgg cagctgctac
    10681 gtcggccgca gcgaagcgga ggtgcgggcc aagcacaacc tcggcagcga tgtggtgctg
    10741 aaccaggaaa gcgacgtgct ggagacctgg ttctcatcgc agctgtggcc gttctccacc
    10801 ctgggctggc cgaacgaaca ggccatggcc gagcgtggct tcgaccgcta cctgccgtcg
    10861 tcggtgctga tcaccggctt cgacatcatc ttcttctggg tggcgcgcat gatcatggcc
    10921 accgacaacc tggtcgggaa gatcccgttc aaggacgtct acttcaccgg cctgatccgc
    10981 gacggccagg gccagaagat gtccaagagc aagggcaacg tgctcgatcc gctggacatc
    11041 atcgacggca tcaccatcga cgacctggtc gccaagcgta ccggcggcct gatgcagccg
    11101 aagatggtgg agaagatcga gaaggccacc cgcaaggaat tcccggacgg catcgccgcc
    11161 cacggtgccg atgcgctgcg cttcaccatc gccgcgctgg ccacccacgg ccgcgacatc
    11221 aagttcgaca tgaaccgcgc cgagggctac aagaacttct gcaacaagct gtggaacgcc
    11281 agccgcttcg ccctgatgaa caccgagggc gcggcgttca gcggcgtgcc cacgccgcgc
    11341 accgatgccg agcgctggat cctggcgcgc ctggccgcca ccaccgccga agcgcagggc
    11401 catttcgccg cctaccgctt cgacctgctg gcacagtgcc tgtacgagtt cgcctggaac
    11461 gcgttctgcg actggttcct ggaactgagc aagccggcac tgagcggtgg tgacgccgcc
    11521 gacgccgaga gcacccgcca caccctgctg tacgtgctgg aagcgctgct gcgcctgctg
    11581 cacccgctga ctccgttcat caccgaacag ctgtggcagc agctggcccc gcgcctgggc
    11641 ctggccgaga ccacgctgtc gctgcgcccg tacccgaccg cggccgagtt cgaaggcgat
    11701 ttcgcccagg ccgaggccga cgtggaatgg ctgaaggcgg tgatcagtgc ggtgcgtcgc
    11761 gtgcgcagtg aactgaatgt cgcgccgtcc aagctggtgc cgctgcgcct gcaggccggg
    11821 ctggagcagg accgcgtgcg catcgaacgc ttcagtgcct cgctgtcgtt ccttctgaag
    11881 ctggacagca tccagtggct ggccgaaggc gaaagcgcac cggctgccgc cgccgcgatc
    11941 atcggtgagc tgaagctgct ggtgccgctg gaaggcctgg tcgatcttga tgccgagcgc
    12001 gtgcgcctgg acaaggaaat cgcccgcgtc gacgccgaaa aggagaagag cgagaccaag
    12061 ctggccaagt tcaccgacaa ggtgccgccg gccgtggtcg agcaggagcg cgtgcgcctg
    12121 gtggactgga acacccagct ggctggcctg cgcgagcagc gcgcgaagct gtaaccgccg
    12181 cgctctggtg cgtgccaacc aaggttggca cctaccacag cgggagaggt tggcacccac
    12241 cgaagcggaa tcggaaacgc cgggcgatgc ccggcgtttc catttgcctc gcatggcatc
    12301 atcggcggat gccgctttcc atcttcctgc tcgtcctcgc tgccgcagca ctgcatgcca
    12361 gctggaatgc gatcgtcaag cgcgggccgg acaagttcct cggcaccgtg ctggtcaccg
    12421 gcagcgccgc gctgctgtcg gccaccgcgt tgccgttcct gcccttccct gccgcgcaca
    12481 gctggccgtg gctgggtgcc tcggtgttgc tgcaggtgac ttactacggc ctggtcgcac
    12541 gctgttatca gcaggtcgac atgagcctgg cctatccgct gatgcgtggc agtgcgccga
    12601 tcctggtcgc actggccggc accctgctgg gtgaagggct gccgcccgtg gcgtggctgg
    12661 gcgtggtgct ggtcagcacc ggcatcctgt gcatggcact gggtgcacga ggcggccagc
    12721 ttcggctgcc actgctgact gccgcaatga tcgccactta cacgctggtc gatgcgcagg
    12781 gtgcgcgcca atccggcagc gcgctcagtt acaccctgtg gttgttcctg ctgtcgggca
    12841 ttccattgcc gctgtgggcg ctgtacaccc ggcggggtgc ggtgctggcc tatgcgcgcc
    12901 agcactggcc gctgggcatg gccggcggcg tcggcaccac cgcctcgtat gcgatggcgc
    12961 tgtgggcgat gacccaggcg ccggtggcga tggtttcggc gctgcgcgaa tcctcgatcc
    13021 tgttcgcgct gctgatctcg gtgttcgcac tgcgcgaacg cgtgccgcgg gtgcgctggc
    13081 tggccgcgtc gctcatcgtg ggcggcgtgc tggcgttgcg gttggcgtga gcagagcgtg
    13141 ccaaccaagg ttggcaccta ccggacatgc cattggacgc tttggtagca gccgaccttg
    13201 gtcggcgcat tcctgtcagc caaggttggc ggctaccggt agtgccggcc gctggccggc
    13261 aacccttctg cgctacagcg gcggcatcgc ctgcaggtcg ccgtcgacca gctcgatcgc
    13321 catcaccagc gcgtcttcgc ggccctgcgc ggcggggtag tagcgcgggc gacggccgat
    13381 ctcgttgaag ccttcgctgt ggtacagcgc cagcgcgggc gcattggacg gccgcacttc
    13441 caggaacacg cgctgcgcgc cgcggtctcc ggccagctgc accagcgcac gcagcaactg
    13501 gcggccgagc ccccgcgact gcgtcgacgg atcgatgcag acgttcagga catgcgcctc
    13561 atcggcggcg atgctgagca cgccgtagcc gatcagcagg ccatcgcgct ccatcgccag
    13621 gcccgggtaa cccgcgcgca ggcagtcaac gaagatgccg cgggtccatg gaaacggata
    13681 accgcgcact tcaatcgcca tcaccgcatt gagatcgctc tcgcgcaacg cgcgaaggct
    13741 gaccgggccg ggctggctga ccgcactcat ggtgcgcccc gcttgcgcag cgcacgcagc
    13801 tgcggccaca gcgcgcgctt ggcggccggg tcgtggcgca gctggtccag gggccaactg
    13861 tccatcagcg cctgcgtcgc cggatcattg ggattgcagc cggacgcacg cagcagcgcg
    13921 atctgcaggc gatccggcag gcgcaccacg ggctgccggg cattgccggc cggcagcgga
    13981 cgcgccgatg ccggcgcggt atcgggtgcg ttgaccgggg tttcgcggcg gggcggcgcc
    14041 gggcgttgca gaccgggcga cggcacagcc tcggcgcggc gttcgcccga cgaagatgcc
    14101 gcgcttgccc gtgccggctg cgtcggcggc acggcggccg cctcggcttc ggccacgctc
    14161 agctgcagcg cggcatccag ctcggcggcc agctggccgt cgtggtagac ggtgtagccc
    14221 atggcctgca gccaggcctg ctgggccgga gaccacagca cgggcaggtc ctggctcacg
    14281 ccgcctcagg cttcttgcgc aggcgctgca cggcccacat caccgggccg gacaaggcat
    14341 acaggatgcc taccgcgaac agcacgcgcg gcagatcgat gaccgcgatg gcgatggcca
    14401 ccggcaccag cgccagcacc aggaacggga cgcgatcaga ccgggtgccc ttggcggcac
    14461 cgcccttgaa gctccagaaa cggatgcggc tgaccatcag cagcgccgcg atgatcgtca
    14521 cggccagcgc cacatagcgc agctggttgc cgtcccagcc caggttgcca tcggcgaagg
    14581 cccagacgaa ggacatcatc agaccggccg cagccgggct ggccaggccg acgaaccagc
    14641 gcttgtcgac caccgccacc tgggtgttga agcgggccag gcgcagcgcc gcgcaggcgg
    14701 catacaggaa ggccacggcc cagccgacgc ggccgagcag cgggtcatcg aacttcagcc
    14761 acgacagcga ccagtggtac atcaccagcg ccggggccat gccgaagctg accaggtcgg
    14821 ccagtgagtc gtactgcacg ccgaattcgc tgctggtgcc ggtcaggcgc gccacgcgcc
    14881 cgtccaggcc atccatcacc gccgccacga acacggcgat gctggcgttg acgaaatccc
    14941 cgttggccgc ggcgatgatc gcgtagaagc cagcgaacag cccggcggtg gtgaacaggt
    15001 tgggcagcag gtaaatcgtg cgcgaacgcg gcggcggtgt gatcgggtcc atggaatcca
    15061 gtttaatcga cttgccagtg ctcggtgcca atgctgcaat cggcgttcta cgcccattct
    15121 gcggagtctg ccatgcgtgc cctgtcctgc cttggatgcc tgctgctgtt ggccagtgcc
    15181 cacgccgtgg ccggtccggt ctacaagtgg aaggacgcca atggcgtgac ccagtactcg
    15241 gagaccccgc cggcgggcaa gaaattcgag acccgcgagc aggcccgcag cccacaggcc
    15301 gcagccagta ccgagacccc ggccgcgccg gtgccggagc agtgcagcac cgcccgcgcc
    15361 aacctggccc tgctggaggg gtccggccag gtgatgcagg acaccaatgg cgacggcaag
    15421 cccgataccg cgctgacccc ggagcagcgc acggcgcaga aggggctggc cgacgcggcc
    15481 atcaaggcct actgcccggc ggagtgaggg tatcggcagg gctgcgccct gcacctgccg
    15541 aagcaacatc aacgtcaaag gccagagcaa cagccggctc tgggctttct gtgggtttgg
    15601 cggggcggtg tcggattgcg gggacgccgt aaaccc
//
LOCUS       DAOKIP010000087        15458 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.087,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000087 DAOKIP010000000
VERSION     DAOKIP010000087.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 15458)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15458)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15458
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.087"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            150..506
                     /locus_tag="QEL58_002237"
     CDS             150..506
                     /locus_tag="QEL58_002237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014646537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676698.1"
                     /translation="MSSSNKTLSLLTATALAAGLGMTASASALSMSDLAQGYLVAGQA
                     AKASTDAKAADTKMAADATKHAEGKCGADGKSAEGKCGADKGKAAGAAAGAKAKTGDK
                     KSAEGKCGEGKCGGKH"
     gene            493..1368
                     /locus_tag="QEL58_002238"
     CDS             493..1368
                     /locus_tag="QEL58_002238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014036545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF692 domain-containing protein"
                     /protein_id="HDS1676699.1"
                     /translation="MASTDVRASMVHPRSPLRAAAAGLGLRRALLQDLRDAPAGDFDF
                     LECAPENWIHVGGPVGDALAELAQRHPLSCHGLSLSLGGSAPLDTQLLEQVGQFLETH
                     RVPLYSEHLSYCSDDGHLYDLLPIPFTDEAVRHTAARIARVQDLLGRRIAVENVSYYL
                     APEPAMDELAFTNAVLAEADCDLLLDVNNVYVNACNHGYDADAFIAGLPAERIVCLHV
                     AGHLDEAPDLKIDTHGSAVIDPVWELLARTYARIGARPTLLERDFNFPPYAELQGELQ
                     TIRRLQATHAGGGHG"
     gene            1361..2116
                     /locus_tag="QEL58_002239"
     CDS             1361..2116
                     /locus_tag="QEL58_002239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005412767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative DNA-binding domain-containing protein"
                     /protein_id="HDS1676700.1"
                     /translation="MAEAPDSLRAQQHAFTAHLRDPQAVAAPAGLEPRRVAVYQRLLF
                     NNLLGLLSNGFPVCVRLLGEPAWSALVRQYFATHRCQTPLFTELAAEFVQWLQARPQL
                     PHPALAELAHYEWVETALYQLAAEPLPPAADIDPLQVPLQRSPLAWPLLYQWPVHRLG
                     AEDAPTQPPVEPTGLLVRREADGEVRFAALSPLAVYLLAGIGEQPGLEGQAYLQHLAN
                     AHGLTEDALAGPGAALLRQFLQAGVIGPLPAPP"
     gene            2140..2661
                     /locus_tag="QEL58_002240"
     CDS             2140..2661
                     /locus_tag="QEL58_002240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HDS1676701.1"
                     /translation="MNLPTLAVARGQLDRLAPWLAPLGLRLLLAWEFFESGREKLQGQ
                     NWFADLQDAFPFPFDQLPPALNWQLATWFELLGAACLLLGFGTRFAATGLLVLTVVAT
                     YAVHWPMEWHSLGDLAMGYAISDQGFGNFKLPVLFMAMLLPLIFTGAGKLSVDAWLSR
                     WFPSGMTVRPAAR"
     gene            2970..3554
                     /gene="rnt"
                     /locus_tag="QEL58_002241"
     CDS             2970..3554
                     /gene="rnt"
                     /locus_tag="QEL58_002241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005408782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease T"
                     /protein_id="HDS1676702.1"
                     /translation="MSQRFRGFLPVVVDVETGGFDSQRNALLEIAAVPIEMDENGLLY
                     PGQTASAHVVPAEGLEIDPKSLEVTGIILDHPFRLAKEEKAALDHIFVPVRAAMKKYG
                     CQRAILVGHNAHFDLGFVNAAVARTGHKRNPFHPFSVFDTVTLAGIAYGQTVLARAAT
                     AAGLGWDANEAHSAVYDTEQTARLFCTIANAWPR"
     gene            complement(3654..6680)
                     /locus_tag="QEL58_002242"
     CDS             complement(3654..6680)
                     /locus_tag="QEL58_002242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014036540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HDS1676703.1"
                     /translation="MGGQGDTRRWAERRGSSFRRALRQGLLWLLLAVAAPLAAQEGAP
                     PLRDYAIDVWTSRNGLPHNSLRDIAQTPEGHLWFATWEGLVRYNGLDFTVFDRSTRPG
                     LRDNGIGALYVDRQGGLWISDSRGNVSHRGNDGQWRVWEHQGDTPQVLIQSMQMDSQG
                     RLWLLYEGKGLGYLVPDKGIVYQAPAADLPMAMSFTKLVVDAQDRVWVGTLDGLVLRD
                     NDGVLKRAPAAWGLGAGTGLSWPYRAPDGALWIVAGERLYRVEDDQLVLVHRLPGQLH
                     MTAMLQDRHGDLWLGTENQGLLRISTHGLERLPAGLNLPGGRVVSLREDAEGSIWVGA
                     NGGLYRLRETLFSSYTERDGLSGDYVRTVFEDRDRQLWVGSASGLDLQTPDGRFRAVP
                     LHNRGGKAPSVLSLAQGPAGDLWVGTFGDGVYRLGPDGSLRHNYAAADGMPGGNIRAI
                     SVDAQGVVWAGTQKGVVRIDGDRVQVSSVPGMPGGLITALEHDHQGNLWIGTIEGIRV
                     LRGNHVQSIDLAPMGGGRSVFGFHQLGDAMWISSDRGLYRWQNGRLARVGLEQGMPVD
                     AVFQLVPDRLGNVWVSSNRGVLRTDMATLNAVADGRAPRVLVERYNEIDGMANAQANG
                     SSGPSAILRQDGTFWVVTAGGLSTVDPQRLQRFRERPSPPAAIESVQVDGAPVHWEGP
                     DRNYIPGGRRLAVSYVGLSYLMSDRIRYRTRLEGLDAGWVERGPQRSVEFVGLPPGDY
                     TLHVAAAHPAGAWGQQEAVWSFTVEPFWWQRRSVQALGGLLLLAGLVALYRLLLQQLK
                     ASNLRLARRVDEATFDLQAKTVHLQALNQEKTELAERLARQAEAFERQAREDALTGLA
                     NRRGFDETMARDFARSQRSGHPLCLVVLDIDHFKDVNDRHSHSIGDAVLVEVARLIAA
                     ASRDSDLPARTGGEEFALLLNDTRLEEAAQLCARLRGLFHDHPDWAGVEGLRVTFSAG
                     LVELDADDRTPALLYQRADRALYRAKSDGRDRTSIG"
     gene            complement(6859..8268)
                     /locus_tag="QEL58_002243"
     CDS             complement(6859..8268)
                     /locus_tag="QEL58_002243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014036539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing protein"
                     /protein_id="HDS1676704.1"
                     /translation="MKRLRHFLSSMVGRLFVILLLGMSVAAIGATMLATSKRQQEFER
                     QNLNRIADRLQGYVNLLDGNPELRERLLEVGGPSVRALLPGARLGRADTALMEVLDDR
                     PGPVSRAHVHFTSFRSCIPKLQDLLPPPPPGHRKHPRERDPAFIPPKCRAVDVTLNDG
                     TLLKLALDSPAVAHNGILAVDPWFLTLLVLAIAVLAYIVARMASAPLQELAAAAEDLG
                     DDLQRDPLPLRGPREVQRAAEAFNAMQHRLQRHLAERTQMLAAITHDLQTPLTRLRLR
                     LENVTDEVLRERLIGDLAAMQALVREGLELARSAESAEQRAALDLDSLLESIVEDAAE
                     GGADVVFEGGTGAVLMLRPLAMHRLFSNLVDNAVMYAQRVRVRVERSGGAITVMVADD
                     GPGLAEDQLEAVFDPFVRVETSRSRETGGAGLGLTIARALAEKDGARLWLRNRAEGGL
                     EAVVQWPASAQVVPPGRAG"
     gene            complement(8275..9003)
                     /locus_tag="QEL58_002244"
     CDS             complement(8275..9003)
                     /locus_tag="QEL58_002244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005415886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HDS1676705.1"
                     /translation="METENTMHRLLIVDDDNDIRTLLAEQLGRAGYQVSTAADGTAMR
                     QLLDREHVDLIVLDLNLPREDGLTLCRDLRARSNTPVIMLTARAEPIDRVLGLEMGAD
                     DYLAKPFEPRELLARIRNVLRRTEALPANLEPLAVRRARFSRWIFDLEHRHLVDPDDR
                     VVVLSGAEFRLLRVFIAHANKVLSREQLVALSSGRNYEAQDRAIDLQVSRLRNKLGDD
                     GGPDGLIKTVRNEGYVLASSVNLE"
     gene            9207..10445
                     /locus_tag="QEL58_002245"
     CDS             9207..10445
                     /locus_tag="QEL58_002245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004151311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HDS1676706.1"
                     /translation="MSFRLLPATRRGRLILIALLALAVAVAAWWLLRKPAAPAVATTP
                     VSRGDIEQTVEATGVIDAYKLVSVGAQASGQIKSLKVQLGDTVKEGDLIAEIDATTQQ
                     NQVLNAQASLDQVTAQRAVQQATLRQAELEFARQQQMLAAEATSRQEYDAAEAQLKTA
                     RAQLQSYEAQIKGRETELGTARANLAYTRITAPMDGTVVAVVAEEGRTVNANQTAPTI
                     VMLARLDVVTVNAEISEADVVKIKAGMPVYFTTLGDPDRKYHAKLRQINPAPASIANE
                     SSSSSSSSSSSSSSSAVYYNALFDVENPDGTLRIDMTAQVSVLLKQAKGVLMVPSVAL
                     GPKHRGDERTVRVLDDKGQPQPRKVTVGINNGASAEILSGLKEGERVVVGEASAAGAA
                     GGGNRGGMQMRVGGPGMGRR"
     gene            10442..12400
                     /locus_tag="QEL58_002246"
     CDS             10442..12400
                     /locus_tag="QEL58_002246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005412764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MacB family efflux pump subunit"
                     /protein_id="HDS1676707.1"
                     /translation="MSMTAPLLRLRDLRREFPAGEDVIAVLRDVNLDIHAGEMVAIVG
                     QSGSGKSTLMNILGCLDRPTRGSYQVAGRETGKMEPDELAELRREHFGFIFQRYHLLG
                     DLDARGNVEVPAVYAGSPGPVRNARAEQLLQRLGLGDRMHHKPGQLSGGQQQRVSIAR
                     ALMNGGEVILADEPTGALDTKSGEEVMAILGELHAEGHTIIIVTHDMSVAQHAQRIIE
                     IRDGEIIADRANPDAPSYRAQREASTGVSHGNSWRAARDRFTEAFRMALLAMNAHRLR
                     TFLTMLGIIIGIASVVSVVALGNGSQQQILQNISALGTNTIDVYPGRGFGDMRSARVQ
                     TLKASDADALAKQSYVDSATPSVSTSVTARYRNQSSTAQVSGVGEQFFRVKGVTLLSG
                     SFFDADAVKGLGQVAVIDENTQTQFFPDVDPVGQVILLGNVPARVVGVAKRQSFGFGG
                     STSLSVWVPYTTVMSRMLGQSHVSSITVRVDDSTPMDAAQEAITRLLTMRHGTEDFFL
                     SNSAEIRDTIEQTTRTMTLLIGAIAAIALLVGGIGVMNIMLVSVTERTREIGVRMAVG
                     ARQSDIRQQFLIEAVLVCLLGGVLGIGLALLLGSMIGRFASDFQVLFSTASIIAAFAC
                     STLIGVAFGFLPARNAAQLDPVEALARE"
     gene            12397..13836
                     /locus_tag="QEL58_002247"
     CDS             12397..13836
                     /locus_tag="QEL58_002247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019336964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HDS1676708.1"
                     /translation="MKMMTRLPFPAPSRLLLAGAVLLALSACASVGRYPIKEPDVAAS
                     YGRGDATLNAPADDPRSSLDTPGRDIRQDTWWTGFGDERLDRLVAQALAANSDLAAAG
                     LAVQRSRLQAGLASNALWPQPSSSGVSGSASRATDQADDWRRSYSTGVSLGWEVDLWG
                     RLRTQRDIARWEAEASEEDRQNTALLVIGDTINQYWNLAYLNQSIATGQANLERLERT
                     RELVQARFDAGAVSRLEVRQALQNLQSQRSSQSALEQQRVEARNALTVLLDGTPWPQQ
                     DEPQDLLGARSPAITEGLPTDLLGRRPDLRAAELRLRNSLKTIKVTATQYYPALSLTG
                     SLGSSATSLDDVLRNPVATLGAGLSLPFLNLQRAQLDTDIAGTAYQIAATNFRKTLYT
                     ALSEVDNALSAREQLARQVAASQASYDEAVEVERAQEVRYRVGATDLRTWLEAQQTRR
                     DAELSLARVRQGQLNNDVTLFKALGGSAG"
     gene            complement(14078..14821)
                     /gene="rlmB"
                     /locus_tag="QEL58_002248"
     CDS             complement(14078..14821)
                     /gene="rlmB"
                     /locus_tag="QEL58_002248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (guanosine(2251)-2'-O)-methyltransferase RlmB"
                     /protein_id="HDS1676709.1"
                     /translation="MSKNSQWIVGVNAVASSIENDAENVREVLVEAGAKNPRLTEIEE
                     NARRKGIDVRKVNAQALDGVGGSVRHQGVAARYAAARTYSENELEGLVTAAEGKALLL
                     VLDEVQDPHNLGACLRSAAAAGATAVIIPKDKSATVNATVRKTSAGAADRIPVVAVTN
                     LSRCLKDLQKQGVWIYGLAGEATASLYQLDLKGNIALVLGGEADGLRRLTRENCDGLV
                     KIPMPGEIESLNVSVAAGVSLFEAVRQRG"
     gene            complement(14928..15410)
                     /locus_tag="QEL58_002249"
     CDS             complement(14928..15410)
                     /locus_tag="QEL58_002249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014036534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GFA family protein"
                     /protein_id="HDS1676710.1"
                     /translation="MQGQPEYSGGCQCGAIRFQARGALTDSSICHCRMCQKAFGAYYA
                     PLVSVRGVQFSWTRGQPRYFQSSNVVRRGFCADCGTPLTYEAPDGVAIAAGAFDQPER
                     LPPTIQYGVERKLPFVDALGGLPARRTEDDVASLAFLATIVSHQHPDHDTPHWPPRSR
                     "
BASE COUNT         2469 a         5524 c         5145 g         2320 t
ORIGIN      
        1 cggccaccgg tctccccttc tgtaacaaac ctcacgaaaa tttgaggtct tggcgaggat
       61 tcgttgagta ggatcgctgc accatcgttt ccaccggcac ccctgccggc cacccgggca
      121 cccgcccaca ccacccagga gcacgaccga tgagcagttc caacaagacc ctgtccctgc
      181 tgactgctac cgccctggcc gccggcctgg gcatgaccgc cagtgcctcg gccctgagca
      241 tgagcgacct cgcccagggc tacctggtgg ccggccaggc tgccaaggcc agcaccgatg
      301 ccaaggccgc cgacaccaag atggccgccg acgcgaccaa gcacgccgaa ggcaagtgtg
      361 gcgccgacgg caagagcgct gaaggcaagt gcggcgccga caagggcaag gccgccggtg
      421 ctgccgccgg tgccaaggcc aagaccggcg acaagaagtc ggctgaaggc aagtgcggcg
      481 aaggcaagtg cggtggcaag cactgacgtc cgcgccagca tggtccaccc gcggtcgccg
      541 cttcgcgcgg cggccgccgg gttgggcctg cgccgggcgc tgctgcagga tctgcgtgat
      601 gcaccggccg gcgacttcga tttcctcgaa tgcgcaccgg agaactggat ccatgtcggt
      661 gggcccgtcg gcgacgcgct ggccgaactg gcgcagcgcc acccgctgag ctgccacggc
      721 ctgtcgttgt cgctgggtgg cagtgcgcca ctggataccc agctgctgga acaggtcggc
      781 cagttcctcg agacccatcg cgtgccgctg tacagcgagc acctgagcta ctgcagcgac
      841 gacggccacc tgtacgacct gctgccgatc cccttcaccg atgaagcggt gcgccatacc
      901 gcggcgcgca tcgcccgcgt gcaggacctg ctgggccgac gcatcgcggt ggagaacgtg
      961 tcctactacc tggcaccgga gccagccatg gacgaactgg ccttcaccaa cgccgtgctt
     1021 gcagaagccg actgcgacct gctgctggac gtcaacaacg tctacgtcaa cgcctgcaac
     1081 cacggctacg atgccgacgc cttcattgct gggctgcccg ccgaacgcat cgtctgcctg
     1141 cacgtggccg ggcacctgga tgaagcaccc gacctgaaga tcgataccca cggcagtgcg
     1201 gtgatcgatc cggtctggga gctgctggcg cgtacctatg cgcgcatcgg cgcgcgcccg
     1261 accctgctcg aacgcgactt caatttcccg ccctatgccg aactgcaggg cgagctgcag
     1321 accatccgcc gcctgcaggc cacgcacgcc ggtggcggtc atggctgagg ctcccgattc
     1381 cctgcgtgca cagcagcatg ccttcaccgc gcacctgcgc gacccgcagg cggtggccgc
     1441 gccggcaggc ctggaaccgc gtcgcgtggc ggtctaccaa cggctgctgt tcaacaatct
     1501 gctcggcctg ttgagcaacg gtttcccggt ctgcgtgcgc ctgctcggcg aacccgcctg
     1561 gagcgcgctg gtgcgccagt acttcgccac gcatcgctgc cagacgccgt tgttcaccga
     1621 gctggccgcc gagttcgtgc aatggctgca ggcacggccg cagctgccgc atccggcact
     1681 ggccgagctg gcccactacg agtgggtgga aaccgcgctg taccagctgg ccgccgagcc
     1741 cctgccgccc gcggcagaca tcgatccgct gcaggtgccg ctgcagcgct cgccgctggc
     1801 ctggccgctg ctgtaccagt ggccggtgca tcggctcggt gccgaggacg cgccaacgca
     1861 gccgccagtc gaaccgaccg gcctgctggt acgccgcgaa gccgatgggg aggtgcggtt
     1921 cgccgcgctc agcccgctgg cggtgtacct gctggccggc atcggcgagc aacccggcct
     1981 cgagggccag gcctacctgc aacacctggc caacgcccac gggctgaccg aggacgcgct
     2041 ggccgggccg ggtgccgcgc tgctgcggca gttcctgcag gctggcgtga tcggcccgct
     2101 ccccgcccct ccctgacccc cttccgcgga gatcccctga tgaaccttcc gaccctggcc
     2161 gtcgcacgcg gccagctgga ccgtctcgcc ccctggctgg ccccgctcgg cctacgcctg
     2221 ctgctggcct gggaattctt cgaatccggc cgcgagaaac tgcagggcca gaactggttc
     2281 gccgacctgc aggacgcctt tccgttcccg ttcgatcaac taccgcccgc cctgaactgg
     2341 cagctggcaa cctggttcga actgctcggc gcggcctgcc tgttgttggg gttcggcacc
     2401 cgtttcgccg ccaccggcct gctggtgctg acggtggtag caacctatgc cgtgcactgg
     2461 ccgatggaat ggcactcgct gggcgacctt gcgatgggct atgcgatcag cgaccagggc
     2521 ttcggcaact tcaaactgcc ggtgctgttc atggcgatgc tgctgccgtt gatcttcacc
     2581 ggtgccggca agctgagcgt ggatgcgtgg ttgtcgcggt ggtttccatc gggcatgacg
     2641 gtccggcccg cggcccggta ggcgctgacc ggggtccggc gcgctctgtg ccaaccaagg
     2701 ttggcaccta ccgggttcca gaggttggca cctaccgggt tccagaggtt ggcacctgcc
     2761 gggtttcagg ggttggcacc tgccgggaac ctggtggtgt ggtgctccgg tgggtgtcga
     2821 ccttggtcga cacgctcctg cgcagggtac ccgtgcgcca caggccagcc gggcgctcgg
     2881 gggcgctctg ctagaattca cgcatgactg accccacccc cgcacctgcc gccgctcccg
     2941 attccgcagt tccccaggcg cagcgcgcga tgtcacaacg cttccgcggc ttcctgccgg
     3001 tggtggtcga tgtggaaacc ggcggtttcg acagccagcg caatgccctg ctggaaatcg
     3061 ccgccgtgcc gatcgagatg gacgagaacg gcctgctcta ccccggccag accgccagcg
     3121 cgcacgtggt gccggccgag ggcctggaga tcgatccgaa gtcgctggaa gtgaccggca
     3181 tcatcctcga ccatccgttc cggctggcca aggaagagaa ggcggcactg gaccacatct
     3241 tcgtcccggt gcgcgccgcg atgaagaagt acgggtgcca gcgcgcgatc ctggtcggcc
     3301 acaacgccca tttcgacctc ggtttcgtca atgcggccgt ggcgcgcacc ggccacaagc
     3361 gcaatccgtt ccatccgttc agtgtgttcg acacggtcac cctggccggc atcgcctacg
     3421 ggcagaccgt gctggcgcgt gcggccacgg ccgccggact gggctgggac gcgaatgaag
     3481 cgcacagcgc ggtgtacgac accgagcaga cggcgcgctt gttctgcacg attgccaacg
     3541 cctggccgcg gtagatccac gccatgcgtg gatgaatgca tcggccgtgc ggaccaacgg
     3601 tccgcaccca ccatccaacc tgcctggtag atccacgcca tgcgtggatg cgatcaaccg
     3661 atgctcgtac gatcgcggcc gtcgctcttg gcccggtaca gcgcgcggtc ggcgcgctgg
     3721 tacagcagcg ccggggtccg gtcatccgca tccagctcca ccaggcctgc gctgaaggtc
     3781 acgcgcaggc cctccacgcc ggcccagtcc ggatggtcat ggaacagccc gcgcaggcgc
     3841 gcgcacagct gcgcggcttc ttccaggcgc gtgtcgttga gcagcagcgc gaactcttcg
     3901 ccaccggtac gcgcgggcag gtccgaatcg cggctggccg cggcgatcaa tcgcgccacc
     3961 tccaccagca ccgcatcgcc gatgctgtgg ctgtggcggt cgttgacgtc cttgaagtga
     4021 tcgatgtcca gcaccaccag gcacagcgga tgaccgctgc gctgggagcg ggcgaagtcg
     4081 cgggccatgg tttcatcgaa gccacggcga ttggccagcc cggtcagggc atcttcgcgg
     4141 gcctgccgct cgaacgcctc ggcctgccgt gccaggcgct cggccagctc ggtcttttcc
     4201 tggttcagcg cctgcaggtg cacggtcttg gcctgcaggt cgaaggtcgc ctcgtccacg
     4261 cgccgggcca ggcgcaggtt gctggccttc agctgctgca gcagcaggcg gtacaacgcc
     4321 accaggccgg ccagcagcaa cagcccgccc agcgcctgca cgctgcggcg ctgccaccag
     4381 aacggctcca cggtaaagct ccacaccgct tcctgctggc cccaggcccc cgccgggtgc
     4441 gcagcggcca catgcagggt gtaatccccc ggcggcaggc caacgaactc gacgctgcgc
     4501 tgcgggccgc gttcgaccca accggcatcc aggccctcca gccgcgtacg gtagcggatc
     4561 cggtcggaca tcaggtagct caggcccacg tagctcaccg ccaggcgacg gccgccggga
     4621 atgtagttgc ggtcggggcc ttcccaatgc accggcgcac catccacctg cacgctctcg
     4681 atcgccgccg gcggtgacgg gcgttcacgg aaacgctgca ggcgctgcgg atcgaccgtg
     4741 ctcagcccgc ctgcggtgac cacccagaac gtgccgtcct ggcgcaggat cgccgacggg
     4801 cccgaactgc cgttggcctg cgcgttggcc atgccgtcga tctcgttgta gcgctccacc
     4861 agcacccgcg gcgcgcggcc gtcggccacc gcattgagcg tggccatgtc ggtgcgcagc
     4921 acgccgcgat tgctgctgac ccacacgttg ccaaggcggt cgggcaccag ctggaacacc
     4981 gcatccaccg gcatgccctg ctccaggcct acccgcgcca gccggccgtt ctgccagcgg
     5041 tacaggccgc ggtcgctgct gatccacatc gcatcgccca gctgatggaa gccgaacacg
     5101 ctgcggccgc cgcccatcgg ggccaggtcg atcgactgca cgtggttgcc gcgcagcacg
     5161 cggatgcctt cgatggtgcc gatccacagg ttgccctggt ggtcatgctc gagcgcggtg
     5221 atcaggccac cgggcatgcc cggcacgctc gatacctgca cgcggtcgcc gtcgatgcgg
     5281 accacgccct tctgcgtgcc ggcccagacc acgccctgcg catccacgct gatcgcgcgg
     5341 atgttgcctc ccggcatgcc atcagcggcc gcatagttgt gccgcaggct gccgtcaggg
     5401 ccgaggcggt agacaccgtc accgaaggtg ccgacccaca gatcccccgc cgggccctgc
     5461 gccaggctga ggaccgacgg cgccttgccg ccccggttgt gcagcggcac cgcacggaag
     5521 cggccatccg gcgtctgcag gtccaggccg ctggcgctgc cgacccacaa ctggcggtca
     5581 cggtcctcga acacggtgcg cacatagtcg ccactgaggc catcgcgctc ggtgtagctg
     5641 ctgaacagtg tctcgcgcag gcggtacagg ccgccgttgg cacccaccca gatgctgccc
     5701 tccgcatcct cgcgcaggct gacaacgcgc ccgccgggca ggttcaaccc cgccggcagc
     5761 cgctccagcc catgcgtgga gatccgcagc aggccctggt tctcggtacc cagccacagg
     5821 tcgccatggc ggtcctgcag catcgcggtc atgtgcagct ggcccggcag gcggtgcacc
     5881 agcaccagct gatcgtcctc cacccggtac aggcgctcgc cggcgacgat ccacagggcg
     5941 ccatccggag cgcggtacgg ccacgacagc ccggtacccg cgcccaggcc ccacgcggcg
     6001 ggtgcgcgct tgagcacacc gtcgttgtca cgcagcacca gcccgtcgag cgtgccgacc
     6061 cagacccggt cctgcgcgtc gaccaccagt ttggtgaagc tcatcgccat cggcagatca
     6121 gccgccggcg cctggtagac gatgcccttg tccggcacca ggtagccgag ccccttgcct
     6181 tcgtacagca gccacaggcg tccctggctg tccatctgca tggactggat cagcacctgc
     6241 ggggtatcgc cctgatgctc ccagacccgc cactggccgt cgttgccgcg atggctgaca
     6301 ttgccgcgcg aatcgctgat ccacagcccg ccctggcgat cgacgtagag cgcgccgatg
     6361 ccgttgtcgc gcaggcccgg gcgggtactg cggtcgaaca cggtgaaatc caggccgttg
     6421 tagcgcacca ggccttccca ggtggcgaac cagagatgcc cctccggggt ctgcgcgatg
     6481 tcacgcagcg agttgtgcgg caggccgttg cgcgaggtcc agacgtcgat cgcgtagtcc
     6541 cgcagcggcg gcgcgccttc ctgtgccgcc agtggcgcgg ccacggccag cagcagccac
     6601 agcagcccct gccgcaatgc ccgcctgaat gatgatccgc ggcgctccgc ccagcgcctc
     6661 gtgtccccct gtccgcccat cagcgcagtg gcggtggcca gcggtggctg cggagtctgg
     6721 cagcgtacgg aaacgcgcgg gcaacgcgga gcggcgtgcc ggcaggaacg ggctggctca
     6781 tcggggggag gctggggaga tgcgcagatg ataggccaaa cacggtcccc ggcgtcaccg
     6841 ttgacggccg gggtcgactc agccggcgcg acccggcggc accacctgcg cactcgccgg
     6901 ccactgcacc acggcttcca gcccgccttc ggcgcgattg cgcagccaca ggcgcgcacc
     6961 atccttctcg gccagcgcgc gggcaatggt cagccccagc ccggcaccac cggtttcgcg
     7021 cgagcgcgag gtttccaccc gcacgaacgg gtcgaacacc gcttccagct ggtcctcggc
     7081 cagcccgggg ccatcatcgg ccaccatcac ggtgatcgcg ccgccactgc gctccacccg
     7141 tacccgcacg cgctgggcgt acatcaccgc gttgtccacc aggttggaga acaggcggtg
     7201 catggccagc gggcgcagca tcagcaccgc tccggtcccg ccttcgaaga cgacatcggc
     7261 gccgccttcg gcggcatctt caacgatgct ctccagcagt gaatccaggt ccagcgccgc
     7321 acgctgctcg gcactttcgg cgctgcgtgc cagttccagg ccttcgcgca ccagtgcctg
     7381 catcgcggcc agatcgccga tcaggcgctc gcgcagcacc tcgtcggtga cattttccag
     7441 gcgcaggcgc aggcgggtca gcggggtctg caggtcgtgg gtgatcgccg ccagcatttg
     7501 cgtgcgctcg gccagatgcc gctgcaggcg gtgctgcatc gcgttgaagg cttccgccgc
     7561 acgctgcact tcgcgcggtc cgcgcagggg cagcggatca cgctgcaggt catcgcccag
     7621 gtcttcggcg gcggccgcca gctcctgcag cggcgcgctg gccatgcgcg cgacgatgta
     7681 cgccagcacc gcgatcgcca gcaccagcag ggtcaggaac cacgggtcga cggcgaggat
     7741 gccgttgtgg gccaccgctg gcgagtccag cgccagcttc agcagcgtac cgtcgttgag
     7801 ggttacgtcg accgcgcggc acttgggcgg aatgaacgcc ggatcgcgct cgcgcggatg
     7861 cttgcgatgc ccgggcggcg gcggcggcag cagatcctgc agcttcggga tgcaggagcg
     7921 gaacgaggtg aagtgcacgt gcgcgcgcga caccgggccg ggccggtcat cgagcacttc
     7981 catcaaggcc gtatcggccc ggcccaggcg cgcgcccggc aacagcgcac gcacgctggg
     8041 gccaccgacc tccagcagcc gctcgcgcag ttcggggttg ccgtcgagca ggttgacgta
     8101 gccctgcagg cggtcggcga tgcgattcag gttctgccgc tcgaactcct gctggcgctt
     8161 ggaggtggcc agcatggtcg cgccgatcgc ggccacgctc atgcccagca gcaggatcac
     8221 gaacagccgc ccgaccatcg aggacaggaa atggcgcagg cgcttcatcg cgacctattc
     8281 caggttgacc gacgaggcca gcacgtagcc ttcgttgcgc accgtcttga tcaggccgtc
     8341 cggtccgccg tcatcgccca gcttgttgcg cagccggctg acctgcaggt cgatcgcgcg
     8401 gtcctgcgcc tcgtagttgc ggccactgct gagcgccacc agctgctcgc gcgacagcac
     8461 cttgttggca tgcgcgatga acacccgcag cagccggaac tcggcaccgg acagcaccac
     8521 cacgcgatcg tccgggtcca ccaggtggcg gtgctccagg tcgaatatcc agcgcgagaa
     8581 gcgcgcgcgg cgtaccgcca acggctccag gttggccggc agcgcttcgg tgcggcgcag
     8641 cacgttgcgg atgcgcgcca gcagctcgcg cggctcgaac ggcttggcca ggtaatcatc
     8701 ggcgcccatt tccaggccca gcacgcggtc gatcggctcg gcacgcgcgg tgagcatgat
     8761 caccggggtg ttcgagcgcg cgcgcaggtc gcggcacagg gtcaggccat cttcgcgtgg
     8821 caggttgagg tcgagcacga tcaggtccac gtgctcgcga tccagcagct ggcgcatggc
     8881 ggtgccatcg gcggccgtgc tcacctggta accggcgcgg ccaagctgtt cggccagcag
     8941 ggtccggatg tcgttgtcgt cgtcgacgat cagcaatcga tgcatcgtgt tttcggtctc
     9001 catgtcgcga tcatcccgtg tcggcagctg aaccgcatcc ggggcaatgc gtaccagtgt
     9061 atccagccga ggccgcgata cctgtggtta cgcgtattca ccgacagtgt tacatagaga
     9121 cataccccga ggattggccc cctgccggtc gatcttcaca atgcccacca acgccgctgc
     9181 cgcggccccg agagtgaagc cacgacgtga gtttccgcct gctgcccgcg acccgccggg
     9241 gtcgactgat actgatcgcc ctgcttgccc ttgccgttgc cgtcgctgcc tggtggctgc
     9301 tgcgcaagcc tgccgccccg gcggtggcga ccaccccggt cagccgcggc gacatcgagc
     9361 agaccgtgga ggccaccggc gtgatcgatg cctacaagct ggtcagcgtc ggtgcgcagg
     9421 cctcgggcca gatcaagtcg ctgaaggtgc agctgggcga cacggtgaag gaaggcgacc
     9481 tgatcgccga gatcgacgcc accacccagc agaaccaggt gctcaacgcg caggcctcgc
     9541 tggaccaggt caccgcccag cgcgcggtgc agcaggccac cctgcgccag gccgaactgg
     9601 agttcgcgcg ccagcagcag atgctggccg ccgaggccac ctcgcgccag gaatacgatg
     9661 ccgccgaggc gcagctgaag accgcccgtg cccagctgca gtcctacgag gcgcagatca
     9721 agggccgcga aaccgagctg ggcaccgccc gcgccaacct ggcctatacc cgcatcaccg
     9781 cgccgatgga cggcaccgtg gtcgcggtgg tggccgagga aggccgcacc gtcaacgcca
     9841 accagaccgc accgaccatc gtcatgctgg cgcggctgga cgtggtcacc gtcaatgccg
     9901 agatctccga ggccgacgtg gtcaagatca aggccggcat gccggtgtac ttcaccacgc
     9961 tgggcgaccc ggaccgcaag taccacgcca agctccgcca gatcaatccg gcgccggcct
    10021 cgatcgccaa cgaaagttcg tccagttcca gcagctcgtc cagctccagc tccagcagcg
    10081 cggtctacta caacgcgctg ttcgacgtgg agaacccgga cggcacgctg cgcatcgaca
    10141 tgaccgccca ggtctcggtg ctgctgaagc aggccaaggg cgtgctgatg gtgccgtcgg
    10201 tggcactggg ccccaagcac cgtggcgatg agcgcacggt gcgggtgctg gacgacaagg
    10261 gccagccgca gccgcgcaag gtcaccgtgg gcatcaacaa cggtgcatcc gccgagatcc
    10321 tgtccgggct gaaggaaggc gagcgcgtgg tggtgggcga agccagcgcg gccggcgccg
    10381 ccggcggcgg caaccgtggc ggcatgcaga tgcgggtcgg tggcccgggc atggggcgcc
    10441 gatgagcatg acggcgccgc tgctgcgcct gcgcgacctg cgacgcgaat tcccggccgg
    10501 cgaggatgtc atcgccgtgc tgcgcgacgt gaatctggat atccatgccg gcgagatggt
    10561 ggccatcgtc ggccagtccg gttcgggcaa gtcgacgctg atgaacatcc tcggctgcct
    10621 cgaccgcccg acccgcggca gctaccaggt ggccggccgc gaaaccggaa agatggagcc
    10681 ggacgagctg gccgaactgc gccgcgagca tttcggtttc atcttccagc gctaccacct
    10741 gctgggtgat ctggatgcgc gcggcaatgt ggaagtgccg gcggtgtacg ccggcagtcc
    10801 cggcccggtg cgcaacgcgc gtgccgagca gctgctgcag cggctgggcc tgggtgaccg
    10861 catgcaccac aagccgggcc agctgtccgg tggccagcag cagcgcgtgt cgatcgcgcg
    10921 cgcgctgatg aacggcggcg aggtgatcct ggccgacgaa ccgaccggcg cactcgacac
    10981 gaaatccggc gaggaggtga tggcgatcct cggcgagctg cacgccgaag gccacaccat
    11041 catcatcgtc acccacgaca tgagcgtggc ccagcacgca cagcgcatca tcgagatccg
    11101 cgacggcgag atcattgccg accgcgccaa tccggatgcg ccgagctacc gcgcgcagcg
    11161 cgaagccagc accggcgttt cccatggcaa cagctggcgg gccgcccgcg accgcttcac
    11221 cgaagcgttc cgcatggctc tgctggcgat gaacgcacat cggctgcgca ccttcctgac
    11281 catgctcggc atcatcatcg gcattgcctc ggtggtctcg gtggtggcgc tgggcaacgg
    11341 ctcacagcag cagatcctgc agaacatcag cgcactgggc accaacacca tcgacgtcta
    11401 ccccggccgc ggcttcggcg acatgcgctc ggcacgcgtg cagacgctca aggccagcga
    11461 tgccgacgcc ctggcgaagc agagctacgt ggacagtgcc acccccagcg tgtcgacctc
    11521 ggtcaccgcg cgctaccgca accagtcctc caccgcccag gtcagcggtg ttggcgagca
    11581 gttcttccgg gtcaagggcg taaccctgct cagcggcagc ttcttcgatg ccgatgcggt
    11641 gaagggcctg ggccaggtgg cggtgatcga cgagaacacc cagacccagt tcttccccga
    11701 tgtcgacccg gtgggccagg tgatcctgct cggcaacgtg ccggcgcggg tggtgggcgt
    11761 ggccaagcgc cagagcttcg gtttcggtgg cagcaccagc ctgagcgtgt gggtgccgta
    11821 taccacggtg atgtcgcgca tgctgggcca gagccacgta tccagcatca ccgtgcgtgt
    11881 ggatgacagc acaccgatgg atgccgcgca ggaagcgatc acccgcctgc tgacgatgcg
    11941 ccacggcacc gaggatttct tcctcagcaa cagcgccgag atccgcgaca ccatcgagca
    12001 gaccacgcgc acgatgaccc tgctgatcgg cgcgatcgcc gccatcgcac tgctggtcgg
    12061 cggcatcggc gtgatgaaca tcatgctggt ctcggtgacc gagcgtaccc gcgagatcgg
    12121 cgtgcgcatg gccgtcggtg cacggcagag cgacatccgc cagcagttcc tgatcgaagc
    12181 ggtactggtg tgcctgctcg gcggcgtgct cggcatcggc ctggccctgc tgctgggctc
    12241 gatgatcggc cgcttcgcca gcgacttcca ggtgctgttc tccacggcct cgatcatcgc
    12301 tgcgttcgcc tgctcgaccc tgatcggcgt ggcgttcgga ttcctgccgg cgcgcaacgc
    12361 ggcgcagctc gacccggtgg aggccctggc ccgcgaatga agatgatgac ccgactgccc
    12421 ttccctgctc cctcgcgcct gctgctggct ggcgccgtgc tgctcgccct gtccgcctgt
    12481 gcgtcggtcg gccgctatcc gataaaggaa ccggacgtgg cggccagcta cggccggggc
    12541 gatgccaccc tcaacgcacc ggccgacgac ccgcgcagca gcctggacac accgggccgc
    12601 gacatccgcc aggacacctg gtggaccggc ttcggcgatg aacgcctcga ccgcctggtg
    12661 gcgcaggcac tggccgccaa cagcgacctg gccgccgccg gcctcgccgt gcagcgttcg
    12721 cgcctgcagg ccgggctggc cagcaacgcg ctatggccgc agccgtcgtc atccggcgtc
    12781 agcggcagcg ccagccgcgc caccgaccag gctgacgact ggcgtcgcag ctactccacc
    12841 ggcgtctcgc tgggctggga agtggacctg tggggccgcc tgcgcaccca gcgcgacatc
    12901 gcccgctggg aggccgaggc gagcgaggaa gaccgccaga acaccgcgct gctggtgatc
    12961 ggcgacacca tcaaccagta ctggaacctg gcctacctca accagtcgat cgccaccggc
    13021 caggccaacc tggagcgcct ggagcgcacc cgtgaactgg tgcaggcccg cttcgacgcc
    13081 ggtgcggtat cgcgcctgga agtgcgccag gcactgcaga acctgcagtc gcagcgctcc
    13141 tcgcagagcg cgctggaaca gcagcgggtg gaggcgcgca atgcactgac cgtgctgctg
    13201 gatggcacgc cctggccgca gcaggacgaa ccgcaggacc tgctgggcgc acgcagtccc
    13261 gccatcaccg agggcctgcc gaccgacctg ctcggccgcc gtcccgacct gcgcgcggcc
    13321 gaactgcgcc tgcgcaacag cctgaagacc atcaaggtga ccgccaccca gtactacccg
    13381 gcgctgagcc tgaccggcag cctcggttcc agcgccacgt cattggatga tgtgctgcgc
    13441 aacccggtgg ccacgctggg cgccggcctg tcgttgccgt tcctcaacct gcagcgcgcg
    13501 cagctggata ccgacatcgc gggcaccgcc taccagatcg ccgccaccaa cttccgcaag
    13561 acgctgtaca ccgcgctctc ggaagtggac aacgcgctgt cggcacgtga gcagctggcg
    13621 cgccaggtgg cggcctcgca ggcctcgtac gacgaagcgg tggaagtcga gcgcgcgcag
    13681 gaagtgcgct accgcgtggg tgccaccgac ctgcgcacct ggctggaggc acagcagacc
    13741 cggcgcgatg ccgagctgtc gctggcgcgc gtgcgccagg gccagctgaa caacgacgtg
    13801 accctgttca aggcgctggg cggcagcgcg gggtgaggcg atgaggggct gcgccccgca
    13861 cccgccaaaa caacgtcaac atcaacgtca acaaccgggc attccgttga atggcgtcat
    13921 acaccgcctt ggtaggtgtc gaccttggtc gacacggtag cgccgggcca tgcccggtga
    13981 gcccgcagcg ccgcacgaaa aaggagcaca aaaaagggtc agagccccct cctgcggaga
    14041 gggatctgac ccccgatcaa tcatccagca gtgccgatca accgcgctgg cgcacggcct
    14101 cgaacaggct gacgccggcg gcgacggaga cgttcaggct ctcgatctcg cccggcatcg
    14161 ggatcttgac caggccatcg cagttctcgc gggtcaggcg gcgcaggcca tcggcttcgc
    14221 cgcccagcac cagcgcgatg ttgcccttca ggtccagttg gtacagcgaa gcggtcgctt
    14281 caccggccag gccgtagatc cacacgccct gcttctgcag gtccttcagg cagcgcgaca
    14341 ggttggtcac cgccaccacc ggaatgcggt cggcggcacc ggccgaggtc ttgcgcacgg
    14401 tggcgttgac cgtggccgac ttgtccttgg gaatgatcac cgcagtggca ccggcggccg
    14461 ccgccgagcg caggcaggcg ccgaggttgt gcgggtcctg cacttcatcc agcaccagca
    14521 gcagggcctt gccctcggcc gcggtaacca agccttccag ctcgttctcg ctgtaggtac
    14581 gggcggcggc ataacgcgcg gccacaccct ggtggcgcac cgaaccgccc acgccatcca
    14641 gcgcctgggc gttcaccttg cgcacgtcga tacccttgcg gcgggcgttt tcctcgattt
    14701 cggtcaggcg cggattcttc gcaccggcct cgaccagcac ttcgcggacg ttctcggcgt
    14761 cgttctcgat ggaggaggcg acggcgttga cgccgacgat ccactggctg ttcttgctca
    14821 tgcgggcggg gaccggaaag ggggtggcta tggtagagca tcggcgggcc gggcgctgcg
    14881 gcggcggcca cccgccagcc gagcgtaggc ccggctctac aggtgggtca tcgactgcgc
    14941 ggcggccagt gcggggtgtc gtggtcgggg tgctggtggg acacgatcgt ggccaggaac
    15001 gccagcgacg cgacgtcgtc ctcggtgcgc cgcgccggca ggccgcccag cgcatcgacg
    15061 aatggcagct tgcgctccac cccgtactgg atcgtcggcg gcaggcgctc gggctggtcg
    15121 aaggcgccgg cagcgattgc cacgccgtcg ggcgcctcgt aggtcagcgg ggtgccacag
    15181 tcggcacaga acccccgccg gaccacgttg gacgactgga agtaacgcgg ctggccgcgg
    15241 gtccagctga actgcacgcc gcgcaccgac accagcggcg cgtagtaggc accgaaggcc
    15301 ttctggcaca tccggcaatg gcagatcgag ctgtcggtca gcgcgccgcg cgcctggaag
    15361 cggatcgcgc cgcactggca gccgccgctg tactcgggtt ggccctgcat ggtgcgttcc
    15421 tccgcaaaat cgtgtcgacc aaggtcgaca cctaccgg
//
LOCUS       DAOKIP010000088        15451 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.088,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000088 DAOKIP010000000
VERSION     DAOKIP010000088.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 15451)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15451)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15451
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.088"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            57..1274
                     /locus_tag="QEL58_002250"
     CDS             57..1274
                     /locus_tag="QEL58_002250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HDS1676711.1"
                     /translation="MTTFAASIDQTLERELPAAAGGCQHAYGRIVLACQNTVTAIALA
                     ITRDRQASEDIAQEAFVKGWQQLHQLRSSTSFLPWLRQITRNLARDWLRAQRGRPLTG
                     EAAEVALGMAADPAPGAADRLQRVEEEIAAEDIISALPADSREVLLLYYREGQRSQQV
                     ADLLGLSDAAVRKRLSRARAQVRDGLLQRFGEFARSSAPSAAFATAVVSMVLVAAPGT
                     ASAAILLGTGVGIGGSKLGLGGASAAGGTAMGSLTATLGQLHVLPAESWGAVIGGVIG
                     GAIGSYLGGRFLMSYTETDAERAGVRRFLYLNITTGMFWCLAILLAVMLQVPVWAQLA
                     VLAVGLGVVNYQCLVPLQRVMAPMIVRDSARRGRTGINWKYESMYGRTGIIAMNLMVI
                     ALVLYSLVRSGRL"
     gene            complement(1326..1886)
                     /locus_tag="QEL58_002251"
     CDS             complement(1326..1886)
                     /locus_tag="QEL58_002251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EF-hand domain-containing protein"
                     /protein_id="HDS1676712.1"
                     /translation="MIRTPLLLALLLGTSASGIALAADTPTTPAQRPAKLDTNGDGVI
                     DRSEAAANPRLAAKFDELDKNKDGKLSRDELPRWKHGRRGHGGERWAKLDVNKDGRIS
                     REEAKADPRLAARFDQLDLNKDGYLDKADRELRVKQMRDAWFAAADTNNDGQLSKAEF
                     DAAKRPMHGGPRQGGPRDGAMPKPQR"
     gene            2043..2798
                     /locus_tag="QEL58_002252"
     CDS             2043..2798
                     /locus_tag="QEL58_002252"
                     /EC_number="2.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005408547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginyltransferase"
                     /protein_id="HDS1676713.1"
                     /translation="MAMHGDRDDELRLFQTGEHPCGYWSDRVARDLVLDPHDRRLGGL
                     YPLALSWGFRRSGDLVYRPHCAHCQACVAVRIPVARFAPDRSQRRCAARNEDLEVRIT
                     AATARDDLFALYHRYLVHRHANGGMDDHGPHEFEQFLIGSWSHTRFMEMRLPGHDGQP
                     SQLLGVAVTDVTEHGLSAVYTFFDPEHAARGLGTFAILQQIEWARREGLPHVYLGYWI
                     RGHQKMDYKRRFHPLEAYDGRRWHDFDHDLDGR"
     gene            2837..4042
                     /locus_tag="QEL58_002253"
     CDS             2837..4042
                     /locus_tag="QEL58_002253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014036367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease/exonuclease/phosphatase family
                     protein"
                     /protein_id="HDS1676714.1"
                     /translation="MNAKPLILALALLCGATAPAFATSPAMTEKPSAALRLATYNTSL
                     YSDDAGGLIKELEGDSEHARKIAAVLQQVRPDLVLLNEFDFDDAHRAADLFQKRYLEV
                     AQPGGGKPLHFAYRYLAPVNTGVPSGLDLDNNGVVGGEGRSRGNDAWGYGLHPGQYGM
                     LVLSRYPIDEAKVRSFQLLKWSTMPGAIRPVDPRTGKSFYNDHVWSQLRLSSKSHWDV
                     PVKTPAGVVHALVSHPTPPVFDGPEKRNAARNHDELRLWQEYLSKGDKPWLCDDKGQC
                     GGLAQDARFVILGDLNNDPVDGDGRHEAIVELIENARVLRYPTPRSVGGEQTSLAYAA
                     KGIARRGAPFHATGDFGPKSGTMRLDYVLPSTGFEYIGSGIFWPANESPEAKIADGSD
                     HHLVWVDVK"
     gene            complement(4114..5301)
                     /gene="purT"
                     /locus_tag="QEL58_002254"
     CDS             complement(4114..5301)
                     /gene="purT"
                     /locus_tag="QEL58_002254"
                     /EC_number="2.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005408545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate-dependent phosphoribosylglycinamide
                     formyltransferase"
                     /protein_id="HDS1676715.1"
                     /translation="MAKLGTPLSPSATRVLLLGSGELGKEVAIELQRLGVEVIAADRY
                     ADAPAMQVAHRSHVIDMLDAMALRALIAQEQPHLVVPEIEAIHTETLVQLEQEQGLRV
                     IPTARAARLTMDREGIRRLAAETLGLPTSPYRFVDTEAEYRAAVAAIGLPCVVKPVMS
                     SSGKGQSTLRSEADIAPAWDYAQTGGRAGAGRCIVEGFIDFDYEITLLTLRHAGGTSF
                     CAPIGHLQKDGDYRESWQPQPMSSAALARAEEISRAITDDLGGWGLFGVELFVKGDEV
                     WFSEVSPRPHDTGLVTLVSQELSEFALHARAILGLPIPVIRQSGPSASCALLAHGEGV
                     PYFNNVAAALQVPDTAVRLFGKPSVHGHRRVGVTLARAETIDEARAIARDAADAIGVE
                     LRP"
     gene            5439..6320
                     /locus_tag="QEL58_002255"
     CDS             5439..6320
                     /locus_tag="QEL58_002255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014507017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPFH domain-containing protein"
                     /protein_id="HDS1676716.1"
                     /translation="MKEKSLSSLNGLGTLAGALLVALAGAAVFVLGVAAKASTGSPNL
                     LLMLLGVLLVAAGMFVLAGLYTIQPNQAAVLSLFGKYVGTVKDNGLRWNNPFFSKRRV
                     SQRVRNFESGKLKVNELDGSPIEIAAVIVWQVVDASEAVYNVDDYESFVHIQSESALR
                     AMATSYPYDQHEDGQLALRSHASEISQHLKNELAERLADAGVQVIDARISHLAYAAEI
                     AQAMLQRQQANAVIAARTRIVAGAVGMVEMALAELQKNGVVQLDEERKAHMVSNLLTV
                     LCSDRGTQPIVNAGSLY"
     gene            6366..6545
                     /locus_tag="QEL58_002256"
     CDS             6366..6545
                     /locus_tag="QEL58_002256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Arc family DNA binding domain-containing
                     protein"
                     /protein_id="HDS1676717.1"
                     /translation="MSEKKAYPLRINAEVLAAAQRWADDELRSLNAQIEYVLRDALRK
                     AGRLPKPKPSPEDKE"
     gene            6542..6721
                     /locus_tag="QEL58_002257"
     CDS             6542..6721
                     /locus_tag="QEL58_002257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4177 domain-containing protein"
                     /protein_id="HDS1676718.1"
                     /translation="MSKRWSYQTIEVKTSMMGLHKAEDIQAELSRQGQLGWELVNIII
                     PAPMRPAMLVFKKEA"
     gene            6725..7318
                     /locus_tag="QEL58_002258"
     CDS             6725..7318
                     /locus_tag="QEL58_002258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012479443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676719.1"
                     /translation="MGASDPKQYEVADSSPLRVLWIVLPLLAAFVACVYAQLYKAPAT
                     APWIEVTLSPPWFRMGGSAAWSLLVIVALGIGLGSAFFRRRVELAGDVLDVRSTLYRR
                     RVSVATLRLDQAEVVDLGRDRRYGIRFKTNGYAMPGFYSGHFRLQGGGKGFALVTDRA
                     RVLALPVSDGSTLLLSVDRPQVLLDALRKVAASVPRQ"
     gene            7328..8137
                     /locus_tag="QEL58_002259"
     CDS             7328..8137
                     /locus_tag="QEL58_002259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004148131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine carboxypeptidase family
                     protein"
                     /protein_id="HDS1676720.1"
                     /translation="MQRRPPLLINTATIELWPAGLLRARSNLDARLLAQARWVLRRKR
                     DGRYLAAVLPRGVHSMVPRLPREPGVEEALALLDAVAARPFGAALEDQWLPLAGLQQR
                     LQQLGLDAQRYADDSGLPLEAEPCLLHFAGRDRFARPLWLRRGAAQGWRRMRLHAARD
                     GVALDAISGFRSHAYQLGIFERKLARGLGVAEILKVNAAPGFSEHHSGHALDIGTPGD
                     APAEESFDATDAFAWLQRHAGAHGFQLSYPRDNPHGIVYEPWHWCWRPANG"
     gene            complement(8649..9020)
                     /locus_tag="QEL58_002260"
     CDS             complement(8649..9020)
                     /locus_tag="QEL58_002260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005408539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF423 domain-containing protein"
                     /protein_id="HDS1676721.1"
                     /translation="MFNLERRARKPSLLACLGALLAAASIGLSAYASHGVADPLAQQH
                     LNMAALYAFAHGAVLVALGPRAQGAIAHLALYVLLLGVLLFSGSLVGGALWQWPTRMA
                     PIGGTSMMAGWVLLAINALRR"
     gene            complement(9124..10197)
                     /locus_tag="QEL58_002261"
     CDS             complement(9124..10197)
                     /locus_tag="QEL58_002261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017117313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HDS1676722.1"
                     /translation="MTRIIEFLIALGIVAGLFVIIGVCLPGERHITESIETNRKMTIV
                     YDTVSSLRRFKDWNPLVLRDPAVELKLSGPASGVGATLDFTSKDLGTGSWKITEAEEN
                     KRVAIAIEDPTKGHDKVTTFTLEPTGKGGRNVKITQDYSVKYGFDLFGRYAGLYVSRQ
                     IGDDIKMGLSRMANMLATVPNVDYRTPEAPLTDLAIVDVPAEDLLVVNAGNVDRGQDT
                     ITKSIKDNQEWIKRVMEANGLEAAGPFRIITTDFGAEKYAFDIAQPVKKKGAEGATAE
                     ELTVKIDGGAPVKYVHVAPHRSAHAAYAGHMAGLDVARNGLRAWAVTSGNEVIDRPYE
                     TWKDGIDKSFTQDGTYDIYWAVK"
     gene            complement(10431..11072)
                     /locus_tag="QEL58_002262"
     CDS             complement(10431..11072)
                     /locus_tag="QEL58_002262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002807809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDS1676723.1"
                     /translation="MIRVCLVDDQTLVRQGIRSLLALDDGIEVVAEAGDGRQAVELIP
                     QVRPDVVLMDMRMPVMSGLEALQVLSRQEQLPPTIILTTFDDDQLVLAGLKAGAKGYL
                     LKDVTLAQLVGAIRTVADGGSLVQPAVTQRLLSGLEHMRNEFVSLDRPDPLTDRETEI
                     LRLMASGFSNKEIANSLGVAEGTIKNHVSNILSKLGVRDRTRAVLKAFELQLV"
     gene            complement(11072..12280)
                     /locus_tag="QEL58_002263"
     CDS             complement(11072..12280)
                     /locus_tag="QEL58_002263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014036358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HDS1676724.1"
                     /translation="MLARLNHNAMLRYSGLFTWGTVGLWLAIYLIDPVSLTLETLDGE
                     AGFRIIPWASAYLAFGIVYWALTRSLGEGRPGFFDHAALILLTACAIGVSYFSGTALG
                     SILLMVVAGLLPWLLGPRIGVVWLVASNLAVLPVYIQPLGFPPFIAVLQAVGYMGFSS
                     FVFVIALVARRQAEARDEQRRLNSELRATRALLAESARVNERTRISRELHDLLGHQLT
                     ALTLNLEVAGHLADGQALEHVKRSHALAKLLLGNVREVVSQLRETGAIDLAAALRPLT
                     ENVPSLDIQLEIEDPLNVEDPQRAHVLLRCTQEIITNAVRHAGARHLWIKVYREAPDR
                     VVVEARDDGVGAEMVNVGNGLRGMRERLQQCGGQLQVETRPGEGFRLRATVPATVLVA
                     ALTKVPEGVR"
     gene            12430..13026
                     /locus_tag="QEL58_002264"
     CDS             12430..13026
                     /locus_tag="QEL58_002264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010483371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDS1676725.1"
                     /translation="MSIVIRDVREHELDSVLALNNNAGLAILPLDAARLRLFYETAEY
                     FRVAERDGNLAGFLIGFGSDSQHDSSNFAWFKQQLDTPFFYIDRIVVASRRRGGGVGR
                     AFYADAQSFAELRYPQMTCEVFLDHGADAALLFHGSFGFRELGQNTMAQVDVRASMLA
                     KELCSYPWVQETYRGKLPDVAWTRARQLPAQAQRPTGT"
     gene            12972..13817
                     /gene="minC"
                     /locus_tag="QEL58_002265"
     CDS             12972..13817
                     /gene="minC"
                     /locus_tag="QEL58_002265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004148076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum site-determining protein MinC"
                     /protein_id="HDS1676726.1"
                     /translation="MDTCPAAAGAGTAADGDLSVAVNFDYEQAGELKIGQVGIANLRI
                     RTLDVERLVQEMRERVTRAPKLFGRAAVILDFGGLSQVPDVATAQALVDGLRSAGVLP
                     VALAYGTSAVDLLSQQLGLPLLAKFRAQYERAEAEPAPPAPAPEPRRAVRAEPKPAPA
                     APVAKVADAAAPQPGRMQLGNVRSGQQLYAENCDLTVMATVGAGAEVIADGSIHIYGT
                     LRGRALAGAQGNTAARIFCRDFHAELVAIAGHYKVLDDVPDNLRGKAVQVWLEQDQIK
                     IAALD"
     gene            13853..14662
                     /gene="minD"
                     /locus_tag="QEL58_002266"
     CDS             13853..14662
                     /gene="minD"
                     /locus_tag="QEL58_002266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020801817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum site-determining protein MinD"
                     /protein_id="HDS1676727.1"
                     /translation="MAEIIVVTSGKGGVGKTTSSASLACGLARRGKKVAVIDFDVGLR
                     NLDLIMGCERRVVYDFVNVVHGEATLKQALIKDKRFDNLYVLAASQTRDKDALTQEGV
                     GKVLKDLAADGFDYIICDSPAGIEKGAFLAMYFADRAVVVVNPEVSSVRDSDRIIGLL
                     DSKTHKAESGQDVPAFLLLTRYTPVRVESGEMLSIADVEEVLGLKAIGVIPESGDVLN
                     ASNKGEPVILDVESAAGQAYEDAVARILGEERPMRFTNVEKKGFFSKLFGG"
     gene            14665..14925
                     /gene="minE"
                     /locus_tag="QEL58_002267"
     CDS             14665..14925
                     /gene="minE"
                     /locus_tag="QEL58_002267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005408532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division topological specificity factor
                     MinE"
                     /protein_id="HDS1676728.1"
                     /translation="MGLFDFLKAKKTTAETAKNRLQIIIAQERSHRGGPDYLPLLQRE
                     LLEVIKKYVNIDVDAVKVDLVKDGQHDVLDISVALPEGPDKP"
     gene            14972..15451
                     /locus_tag="QEL58_002268"
     CDS             14972..15451
                     /locus_tag="QEL58_002268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005412610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676729.1"
                     /translation="MTDTTTAVDITCVGDIAFADAQCLLAAHGLRLHHVAAGEPIPGS
                     YWGEPEAGIIASNVYVRDDTPVHSMLHEACHLIVLPPERRAQVHTDATDSVAEEDATC
                     YLQIVLAGQLPGVGSERLMADMDAWGYTYRLGSTKAWFEQDAEDAKAWLIERGLPVA"
BASE COUNT         2601 a         5247 c         5135 g         2468 t
ORIGIN      
        1 cacacttcgc gcgcggctcc gtcatgggac acaatcccag caggagagcc gccgccgtga
       61 cgaccttcgc cgcatcgatc gaccagaccc tggaacgcga actgccggcc gccgctggcg
      121 gctgccagca tgcctatggc cgcatcgtgc tggcctgcca gaacacggtc accgccatcg
      181 cgctggccat cacccgcgac cgccaggcca gcgaggacat cgcccaggaa gccttcgtga
      241 agggctggca gcagctacac cagctgcgca gttcaaccag cttcctgccc tggctgcggc
      301 agatcacccg caacctggcc cgcgactggc tgcgtgcgca gcgtggccgg ccgctgaccg
      361 gagaggcggc cgaagtggcg ctgggcatgg ccgccgaccc ggcgccaggt gcggccgacc
      421 ggctgcagcg ggtggaagaa gagatcgccg ccgaagacat catttccgcg ttgccggccg
      481 acagccgcga agtcctgctg ctgtactacc gcgaaggcca gcgttcgcaa caggtagccg
      541 acctgctcgg gctcagcgac gccgccgtgc gcaagcggct gtcgcgtgcc cgcgcccagg
      601 tgcgtgacgg cctgctgcaa cgcttcggcg aattcgcccg cagcagtgcc ccgagtgcgg
      661 cgttcgccac ggccgtggtg tcgatggtgc tggtggccgc gcccggcacc gccagcgcgg
      721 cgatcctgct cggcaccggc gtcggcatcg gtggcagcaa actcgggctc ggcggcgcca
      781 gtgcggcggg cggcaccgcg atgggctcgt tgaccgccac gctgggccag ctgcacgtgc
      841 tgccggcgga aagctggggc gcggtcatcg gcggcgtgat tggcggagcg atcggcagct
      901 atctgggcgg acgcttcctg atgtcgtaca ccgagaccga tgccgagcgc gccggcgtgc
      961 gtcgcttcct ctacctcaac atcaccaccg gcatgttctg gtgcctggcg atcctgctgg
     1021 cggtgatgct gcaggtaccg gtctgggcac agctggcggt gctggcggtc ggcctgggcg
     1081 tggtcaacta ccagtgcctg gtaccgctgc agcgggtgat ggcgccgatg atcgtgcgcg
     1141 actcggcacg gcgcgggcgc acgggcatca actggaaata cgagtcgatg tacggccgca
     1201 ccggcatcat cgccatgaac ctgatggtga tcgcgctggt gctgtactcg ctggtgcgca
     1261 gcggccgcct gtaacggaca acgccggcag tgcgccggcg ttgtcgtcgt tcattgcgct
     1321 ggctctcagc gctgcggctt cggcatggcg ccgtcacgtg ggccgccctg acgcggacca
     1381 ccgtgcatcg ggcgcttggc cgcatcgaac tcggccttgc tcagctggcc atcattgttg
     1441 gtgtcggccg cggcgaacca ggcatcacgc atctgcttca cgcgcagttc gcggtcggcc
     1501 ttgtccaggt agccgtcctt gttgaggtcg agctggtcga agcgcgcggc caggcgcgga
     1561 tcggccttgg cttcctcgcg gctgatgcgg ccgtccttgt tgacgtccag cttggcccag
     1621 cgctcgccgc cgtggccacg gcgaccgtgc ttccagcgcg gcagttcatc gcgcgagagc
     1681 ttgccgtcct tgttcttgtc cagttcgtcg aacttcgccg ccagacgcgg gttggcagcg
     1741 gcttcgctgc ggtcgatgac gccgtcgcca ttggtgtcca gcttggccgg gcgctgcgcc
     1801 ggcgtggtcg gggtgtcggc cgccagcgcg ataccggaag cggaggtgcc gagcagcagg
     1861 gccagcagca ggggggtacg gatcatgagg tcactcctgg ggatgggaac agcgtcgggg
     1921 tgatcacttc accctcgggg gacaacaacg cccgggcgcg acatcggttg acgccgctgc
     1981 cggttccatt catccggcgg acagtcgccg ccactgcgac gggctggggc tatgctgtgc
     2041 ccatggcgat gcatggcgac agagacgacg aactgcgact tttccagacc ggcgagcacc
     2101 cctgcgggta ctggtcggac cgggtggcgc gcgacctggt gctggacccg cacgaccgcc
     2161 gcctcggcgg cctgtatccg ctggcgctga gctggggctt ccgccgcagc ggtgacctgg
     2221 tctaccggcc gcattgcgcg cactgccagg cctgcgtggc agtgcgcatc ccggtggcgc
     2281 gcttcgcccc ggaccgcagc cagcgccgtt gcgcggcccg caatgaagac cttgaggtgc
     2341 gaatcaccgc cgccaccgcg cgcgacgacc tgttcgcgct gtatcaccgc tacctggtgc
     2401 accgccacgc caacggcggc atggacgacc acggcccgca cgagttcgag cagttcctga
     2461 tcggcagctg gtcgcacacc cgcttcatgg agatgcgcct gcccggccac gacggccagc
     2521 ccagccagct gctgggggtg gcggtgaccg acgtcaccga gcacggcctg tcggcggtct
     2581 acaccttctt cgacccggag cacgccgcgc gcgggctggg taccttcgcg atcctgcagc
     2641 agatcgaatg ggcccgccgc gagggcctgc cgcacgtcta cctgggctac tggatccgcg
     2701 gccaccagaa gatggactac aagcgccgct tccatccgct ggaggcctac gacggccgcc
     2761 gctggcacga tttcgaccat gatctggacg ggcgctgaca aaccgctgac accgggccgg
     2821 gtgcacaata cggcccatga acgccaaacc cctgatcctc gccctggccc tgctctgcgg
     2881 cgccactgcc cccgccttcg ccacgtcccc tgcgatgacc gaaaagccgt ccgctgcgct
     2941 gcgcctggcc acctacaaca cctcgctgta ctccgatgac gccggtggcc tgatcaagga
     3001 actggaaggc gacagcgagc acgcacgcaa gatcgccgcg gtgctgcagc aggtgcgccc
     3061 ggatctggtg ctgctgaacg agttcgactt cgacgacgcc caccgcgccg ccgacctgtt
     3121 ccagaagcgc tacctggaag tggcccagcc cggcggcggc aagccgctgc acttcgccta
     3181 ccgctacctg gcgccggtca acaccggcgt gcccagcggc ctggacctgg acaacaacgg
     3241 cgtggtcggc ggcgaaggcc gcagccgcgg caacgatgcc tggggctacg gcctgcaccc
     3301 gggccagtac ggcatgctgg tgctgtcgcg ctacccgatc gatgaagcca aggtgcgcag
     3361 cttccagctg ctgaagtgga gcacgatgcc gggcgcgatc cgtccggttg atccgcgcac
     3421 cggcaagagc ttctacaacg accacgtgtg gtcgcagctg cggctgtcct ccaagtcgca
     3481 ttgggacgtg ccggtgaaga ccccggccgg cgtggtgcac gcgctggtct cgcacccgac
     3541 gccgccggtg ttcgacggcc cggagaagcg caacgccgcg cgcaaccacg acgagctgcg
     3601 cctgtggcag gaatacctgt ccaagggtga caagccgtgg ctgtgcgacg acaagggcca
     3661 gtgcggcggc ctggcccagg acgcacgctt cgtgatcctc ggcgacctca acaacgaccc
     3721 ggtcgatggt gatggccgcc atgaagcgat cgtcgaactg atcgagaacg cccgcgtgct
     3781 gcgctacccc accccgcgca gcgtcggtgg cgagcagacc agcctggcct atgcggccaa
     3841 gggcatcgcg cgcaggggcg cgccgttcca tgccaccggc gatttcggtc cgaagtccgg
     3901 caccatgcgc ctggactacg tgctgccctc gaccggcttc gagtacatcg gcagcggcat
     3961 cttctggccg gccaatgaaa gccccgaagc gaagatcgcc gacggcagcg accaccacct
     4021 ggtgtgggtg gatgtgaagt aaaaaaaagg ggacggaggg gattaagtcg tttgtggcac
     4081 aaacgactta atcccctccg tccccttttt gttttacggg cgcagttcga cgccgatggc
     4141 gtcggcggca tcacgcgcga tggcgcgtgc ttcgtcgatg gtttccgcac gtgccagggt
     4201 caccccgacg cggcgatggc cgtgcacgct cggcttgccg aacaggcgca ccgcggtatc
     4261 cggcacctgc agcgcagcag cgacgttgtt gaagtacggc acgccttcgc catgcgccag
     4321 cagcgcgcac gaggccgacg ggccgctctg gcggatcacc ggaatcggca ggccgaggat
     4381 cgcgcgcgca tgcagcgcga actcgctcag ctcctgcgag accagcgtca ccaggccggt
     4441 gtcgtgcgga cgcggcgaca cttcgctgaa ccacacctcg tcgcccttca cgaacagctc
     4501 gacgccgaac aggccccaac cgccgaggtc gtcggtgatc gcgcgcgaga tttcttccgc
     4561 acgtgccagt gccgcgctcg acatcggctg cggctgccag ctctcgcggt agtcgccgtc
     4621 cttctgcagg tggccgatcg gcgcgcagaa cgaggtgcca ccggcgtggc gcaaggtcag
     4681 cagggtgatc tcgtaatcga agtcgatgaa gccttcgacg atgcagcggc cggcaccggc
     4741 acggccaccg gtctgcgcgt agtcccaggc cggggcgatg tccgcctcgc tgcgcagcgt
     4801 gctctggcct ttgcccgagg acgacatcac cggcttgacc acgcacggca ggccgatcgc
     4861 ggccaccgcg gcacggtact cggcctcggt atcgacgaag cggtacggcg aggtcggcag
     4921 cccgagggtc tcggcggcca ggcggcggat gccttcacgg tccatggtca ggcgtgcggc
     4981 gcgcgcggtc gggatcaccc gcaggccctg ctcctgttcc agctggacca gggtctcggt
     5041 gtggatggct tcgatctccg gcaccaccag gtgcggctgt tcctgggcga tcagcgcgcg
     5101 cagggccatg gcgtccagca tgtcgatcac gtgcgagcga tgcgcgacct gcattgccgg
     5161 cgcatcggca tagcgatcgg cggcgatcac ttccacgccc agccgctgca gctcgatggc
     5221 cacctccttg ccgagttcac ccgagcccag cagcagcacg cgggtggcgg agggggacaa
     5281 cggagttcca agcttggcca tggcggttcc agcagcgatg tgaaggcggg tgggcattct
     5341 agctggccgg gcaccccggc cacggcatcc gacgaacggt agcccacatc tgatatcact
     5401 ttgatatctt cacttcgaac cctcaaggac gtactgccat gaaagagaag tcgctgtcct
     5461 cgctcaacgg cctcggcacg ctggccggcg ccctgctcgt cgccctcgcc ggtgccgccg
     5521 tgttcgtgct cggggttgcc gccaaggcca gcaccggctc gcccaacctg ctgctgatgc
     5581 tgctgggcgt cctgctggtc gcggcgggca tgttcgtcct ggccggcctg tacaccatcc
     5641 agcccaacca ggccgcggtg ctcagcctgt tcggcaagta cgtcggcacc gtgaaggaca
     5701 acggcctgcg ctggaacaat cccttcttca gcaagcgccg ggtcagccag cgcgtgcgca
     5761 acttcgaaag cggcaaactg aaggtcaacg agctggacgg cagcccgatc gagatcgccg
     5821 cggtgatcgt ctggcaggtg gtcgatgcct ccgaggcggt ctacaacgtg gatgactacg
     5881 agagcttcgt gcacatccag tccgaatcgg cgctgcgcgc gatggccacc agctatccct
     5941 acgaccagca cgaggacggc cagctggccc tgcgcagcca cgccagcgag atctcccagc
     6001 acctgaagaa cgagctggcc gagcgcctgg ccgatgccgg cgtgcaggtg atcgacgcgc
     6061 gcatcagcca cctcgcctac gccgccgaaa tcgcccaggc gatgctgcag cggcagcagg
     6121 ccaatgcggt gatcgccgcg cgcacgcgca tcgttgccgg cgcggtcggc atggtcgaga
     6181 tggccctggc cgaactgcag aagaacggcg tggtgcagct ggatgaggaa cgcaaggcgc
     6241 acatggtcag caacctgctg accgtgctgt gctcggaccg cggcacccag ccgatcgtca
     6301 atgccggttc gctgtactga accaccctcg caacggggcg ccccaccgcc ccgccaggag
     6361 ttttcatgag tgagaagaaa gcctatccgc tgcgcatcaa tgccgaggtc ctggccgcgg
     6421 cacagcgctg ggctgacgat gagctgcgca gcctcaacgc gcagatcgaa tacgtgctgc
     6481 gcgacgccct gcgcaaggca ggacgcctgc cgaaacccaa gccatcgccg gaggacaagg
     6541 aatgagcaag cgctggagct accagaccat cgaggtcaag acgtccatga tgggcctgca
     6601 caaggccgag gacatccagg ccgaactcag ccgccagggc caactgggct gggagctggt
     6661 caacatcatc atcccggcgc cgatgcgccc ggcgatgctg gtgttcaaga aggaggcctg
     6721 agccatgggt gccagcgatc cgaaacaata cgaggtagcc gacagctcgc cgttgcgcgt
     6781 gctgtggatc gtgctgccgc tgctggccgc cttcgtggcc tgcgtgtatg cgcagctgta
     6841 caaggcaccg gccaccgcgc cctggatcga agtgacgctc tcgccgccct ggttccgcat
     6901 gggcggcagc gccgcctgga gcctgctggt gatcgtcgcg ctcggcatcg ggctgggctc
     6961 ggccttcttc cgccgccggg tggaactggc cggcgacgtg ctggatgtgc gctcgaccct
     7021 gtatcgccgg cgtgtttcgg tggcaacgct gcggctggac caggcggagg tggtcgatct
     7081 cggccgcgac cgccgctatg gcatccgttt caagaccaac ggctatgcaa tgccgggctt
     7141 ctattcgggc cacttccgcc tgcagggcgg cggcaaggga ttcgccctgg tcaccgatcg
     7201 cgcgcgtgtg cttgccctgc cggtcagcga tggcagcacg ctgctgctca gcgtggaccg
     7261 gccgcaggta ctgctcgatg ccctgcgcaa ggtggccgca tcggtgccgc ggcagtaagc
     7321 tgcggcgatg caacgacgcc cgcccctgct gatcaatacc gcgaccatcg agttgtggcc
     7381 cgccggcctg ctgcgcgcgc gcagcaacct ggacgcacgc ctgttggcgc aggcgcgctg
     7441 ggtactgcgg cgcaagcgtg atggccgcta tctggcggcc gtactgccgc gcggcgtgca
     7501 ttcgatggtg ccacgactgc cgcgcgaacc cggggtcgag gaagcgctgg cactgctgga
     7561 cgcagtggca gctcggccat tcggggcagc gctggaagat caatggcttc cgctggccgg
     7621 actgcagcag cgcctgcagc agctgggcct ggacgcccag cgctacgcag acgacagcgg
     7681 cctgccgctg gaggccgaac cctgcctgct gcatttcgcc ggtcgtgacc gcttcgcccg
     7741 cccgctgtgg ctgcgccgcg gcgctgcgca gggctggcgc cggatgcgcc tgcacgctgc
     7801 acgggatggc gtggcactgg acgcgatctc tggttttcgc agccatgcct accagctggg
     7861 catcttcgaa cggaagctgg cacgcgggct gggcgtggcc gagatcctga aggtcaatgc
     7921 cgcgccgggc ttcagcgaac accacagcgg ccatgcgctg gacatcggta cgccgggcga
     7981 tgcgccggca gaggaatcct tcgacgccac cgatgcgttt gcctggctgc agcgccatgc
     8041 cggcgcgcac ggcttccaac tgagctaccc gcgcgacaac ccgcacggga tcgtctacga
     8101 accgtggcac tggtgctgga gaccggccaa cggctgagcc cctcgtggcg accgcaaggc
     8161 gaaattcatg gcgctgtccg ggcgggtagg ctgcgcaggg gacgccgtaa atccgtccct
     8221 ggaggcttag ccgcgccatc catggcgcgg atacccctgt ccagcccacc cgcccggcct
     8281 ctgacagttt ccgtgtgcat ccgccacgga atggaacaag agagcaaagg caaaagccgg
     8341 tcgcttcgct cgaagcctct gcaacggatc agcgcgcggc tgttgggtcc gccttcaagc
     8401 gagccgagca ccgcaggtcc gtcgagggcg aagaggtgcg tgcgattctg tagagccgag
     8461 ccatgctcgg ctgctctccg caccgtccct cgacgggccg aggagcgcag ggcaccggtg
     8521 cgcagcaccg gctcgcggcc ggcggcgcgt ttcttttggt tacttttctt ttcgcgcgag
     8581 aagaaaagta acgcccatga accatcacga tcgcatcagc atggatcgaa tcgacagccc
     8641 ggctgccgtc accgcctcaa cgcattgatc gccagcaaca cccatccggc catcatgctg
     8701 gtgccgccga tcggcgccat ccgcgtcggc cactgccaca acgccccgcc caccaggctg
     8761 ccggaaaaca gcagcacgcc cagcagcagt acgtacaacg ccaggtgcgc gatcgccccc
     8821 tgcgcacgcg ggcccagcgc caccagcacc gcaccgtgcg cgaatgcgta cagcgctgcc
     8881 atgttcagat gctgctgcgc caacggatcg gccaccccat gcgaggcata ggcggacagg
     8941 ccgatcgagg cggcggccag caatgccccc aggcaggcca gcagggaagg cttacgggca
     9001 cggcgttcga gattgaacat gagggctcct tgcgcaacgc ccttgccggg cgccagatga
     9061 aaaaaaacgc gccgcaagaa gcggcgcgtt ttcgtgtcca acactacatg ggtcagccga
     9121 ggcttacttg acggcccagt agatgtcgta ggtaccgtcc tgggtgaacg acttgtcgat
     9181 gccgtccttc caggtctcgt acggacggtc gatgacttcg ttgcccgagg tcacggccca
     9241 ggcacgcagg ccgttgcggg ccacgtccag acccgccatg tggccagcgt aggccgcatg
     9301 cgccgaacgg tgcggagcaa cgtgcacgta cttgaccgga gcgccgccgt cgatcttgac
     9361 ggtcagctct tcagcggtgg caccttcagc acccttcttc ttcaccggct gggcgatgtc
     9421 gaaggcgtac ttctcagcac cgaagtcggt ggtgatgatg cggaacgggc cagcggcttc
     9481 aaggccattg gcctccatca cgcgcttgat ccactcctgg ttgtccttga tggacttggt
     9541 gatcgtgtcc tgaccgcggt ccacgttacc ggcgttgacg accagcaggt cttcagccgg
     9601 cacatcgacg atggccagat cggtcagcgg cgcttccggg gtgcggtagt cgacgttcgg
     9661 gacggtggca agcatgttgg ccatgcgcga caggcccatc ttgatgtcgt cgccgatctg
     9721 gcggctgaca tacaggccgg cataacgacc gaacaggtcg aagccgtact tcaccgagta
     9781 gtcctgggtg atcttgacgt tgcggccacc cttgccggtc ggctccaggg tgaaggtggt
     9841 gaccttgtcg tgacccttgg tcgggtcttc gatggcgatc gcaacgcgct tgttttcttc
     9901 ggcttcggtg atcttccagg agccggtgcc caggtccttg gaggtgaagt cgagagtggc
     9961 accgacgccg gaggccgggc cggacagctt cagttcaacg gcgggatcgc gcagtaccag
    10021 cgggttccag tccttgaagc ggcgcaggct gctgaccgtg tcgtacacga tcgtcatctt
    10081 gcggttggtc tcgatgcttt cggtgatgtg acgctcgccc ggcagacata cgccaatgat
    10141 gacgaacagg ccagccacga tccccaaggc gatcaggaac tcgataatac gggtcattca
    10201 gagagtctcc ggggccgatc ccacggccgg gttgattgaa gcgaagcgcc aatcctagca
    10261 ggcttcgcgg gcattgttta tcgggattgg cgcaccggtt tccctgccgg ctgcgtattt
    10321 gtatggacaa agaattcgaa gggtaacgca taccgccacc cgccagtagg gggcgcgctt
    10381 ggccggaacc cccggccgtc gcccaagttg ttgtaccgga acgattttcc ctagaccagc
    10441 tggagttcga acgccttcag tacggcgcgc gtacggtcgc gcacacccag cttggagagg
    10501 atgttggaca cgtggttctt gatcgtgcct tcggccacgc ccagcgagtt ggcgatctcc
    10561 ttgttggaga atccgctggc catcagccgc aggatctcgg tctcgcggtc ggtcagcggg
    10621 tcgggccggt ccaggctgac gaactcgttg cgcatgtgtt ccaggccgga cagcagccgc
    10681 tgggtcaccg ccggctgcac cagcgaaccg ccgtcggcca cggtgcggat ggccccgacc
    10741 agctgcgcca gggtcacgtc cttgagcagg tagcccttgg caccggcctt gagcccggcc
    10801 agcaccagct ggtcgtcatc gaaggtggtg aggatgatgg tcggcggcag ctgctcctgc
    10861 cgtgacagca cctgcagcgc ttccagcccg gacatcaccg gcatgcgcat gtccatcagg
    10921 accacatcgg ggcgcacctg cgggatcagc tcgactgcct gccgtccatc gccggcctcg
    10981 gccaccacct cgatgccatc gtcgagcgcc agcagggagc ggattccctg ccgcaccagg
    11041 gtttggtcat cgaccaggca gacgcgaatc atcaacgtac tccttcagga accttggtaa
    11101 gggcggccac cagcaccgtt gccggcaccg tcgcccgcag gcggaagcct tcgccgggac
    11161 gggtctcgac ctgcagctgg ccaccacatt gttgcaggcg ctcgcgcatg ccgcgcaagc
    11221 cattgcccac attgaccatt tccgcgccga cgccgtcgtc gcgtgcctcc accaccaccc
    11281 ggtccggcgc ttcacggtac accttgatcc acaggtggcg ggcaccggcg tggcgcacgg
    11341 cattggtgat gatctcctgg gtgcagcgca gcagcacgtg ggcccgctgc gggtcctcca
    11401 cgttcagggg atcctcgatc tccagctgga tgtccagcga gggcacgttc tcggtcaacg
    11461 ggcgcagcgc cgcggccagg tcgatggcac cggtctcgcg cagctggctg accacctcgc
    11521 gcacgttgcc cagcagcagc ttggccaatg cgtgggaacg cttcacatgc tccagcgcct
    11581 ggccgtcggc caggtggccg gccacttcca ggttcagggt cagcgcggtc agctggtggc
    11641 ccagcaggtc atgcagctcg cgcgagatgc gcgtgcgctc attgacccgg gcgctctcgg
    11701 ccagcagggc gcgggtggcg cgcagttccg agttgagccg gcgctgttcg tcgcgggcct
    11761 cggcctggcg acgggccacc agcgcgatca cgaacacgaa gctggagaag cccatgtagc
    11821 ccaccgcctg cagcacggcg atgaacggcg ggaagcccag cggctggatg tagaccggca
    11881 acaccgccag gttgctggcc accagccaga ccacgccgat gcgcggcccc agcagccatg
    11941 gcagcaggcc ggccaccacc atcagcagga tgcttcccag cgcggtaccg gaaaaatagc
    12001 tcacgccgat cgcgcaggcg gtcagcagga tcagcgccgc gtggtcgaag aaacccggac
    12061 ggccctcgcc cagcgagcgg gtcagcgccc agtacacgat gccgaaagcc aggtaggccg
    12121 aggcccaggg aatgatgcgg aagccggctt cgccgtccag cgtctccagc gtcagcgaga
    12181 caggatcgat caggtagatc gcgagccaaa ggccgacggt gccccaggtg aacaacccgg
    12241 agtagcgcag catcgcattg tggttcagtc gggccagcat ccctcatcgt agcccgtgca
    12301 cggccgctcc caagcgccga aagtcatgct cgggcatatc ccctgttcat gccgcagccc
    12361 accccgggca tgcaataatc gtgcgcaggg tcccttgatg gaccaaccgc gttaccccac
    12421 ggagtcacaa tgtcgattgt catccgcgac gtgcgcgagc acgagctcga ttccgtcctg
    12481 gctttgaaca acaacgctgg cctggccatc cttcccctgg atgcggcccg cctgcgcctg
    12541 ttctacgaaa ccgctgagta tttccgcgtc gccgagcgcg acggcaacct ggccggattc
    12601 ctgatcggct tcggcagcga cagccagcac gacagcagca acttcgcctg gttcaagcag
    12661 cagctggaca ccccgttctt ctatatcgac cgcatcgtgg tcgccagccg ccgtcgcggc
    12721 ggtggcgtcg gccgtgcgtt ctatgccgac gcccagagct tcgccgagct gcgctacccg
    12781 cagatgacct gcgaggtctt cctcgaccat ggcgccgatg ccgccctgct cttccacggc
    12841 agcttcggct tccgcgagct gggccagaac accatggccc aggtcgatgt gcgtgccagc
    12901 atgctggcca aggaactgtg cagctacccg tgggtgcagg aaacctaccg cggcaagctg
    12961 ccggatgtgg catggacacg tgcccggcag ctgccggcgc aggcacagcg gccgacgggg
    13021 acctgagcgt ggcggtgaat ttcgattacg aacaggccgg tgaactgaag atcggccagg
    13081 tgggcatcgc caacctgcgc atccgtaccc ttgatgtcga acgcctcgtg caggaaatgc
    13141 gcgagcgcgt gacccgcgca ccgaagctgt tcggccgcgc tgcggtgatc ctcgatttcg
    13201 gcggcctgag ccaggtcccg gacgtggcca ccgcacaggc gctggtcgac ggcctgcgca
    13261 gcgcgggcgt gctgccggtg gcactggcct atggcaccag cgcggtcgac ctgctttcgc
    13321 agcagctcgg cctgccgttg ctggccaagt tccgcgcgca gtacgagcgt gccgaggccg
    13381 aaccggcccc gccggcgccc gcaccggaac cgcgccgcgc cgtccgcgcc gagccgaagc
    13441 cggcccccgc cgcgccggtg gccaaggtcg ccgatgccgc cgcgccgcag ccgggccgca
    13501 tgcagctggg caacgtgcgt tcgggccagc agctgtacgc ggaaaactgc gacctgaccg
    13561 tgatggccac cgtcggcgcc ggcgccgagg tcatcgccga tggcagcatc catatctacg
    13621 gcaccctgcg cggccgcgcg ctggcaggag cccagggcaa caccgcggca cgcatcttct
    13681 gccgtgattt ccatgcggaa ctggtcgcca ttgcaggcca ttacaaggta ctggacgatg
    13741 tgccggacaa cctgcgcggc aaggccgtgc aggtatggct ggaacaggac cagatcaaga
    13801 tcgctgcgct ggactgacgc agcacccaaa cagaatcatc aggagaagtc ctttggctga
    13861 aatcatcgta gtcacctccg gcaagggcgg cgtcggcaag accacttcca gcgcgagcct
    13921 ggcctgcggc ctggcgcggc gcggcaagaa ggtggcggtg atcgacttcg acgtcggcct
    13981 gcgcaacctc gacctgatca tgggctgcga acgccgcgtg gtgtatgact tcgtcaacgt
    14041 cgtgcacggc gaagccaccc tcaagcaggc cctgatcaag gacaagcgct tcgacaacct
    14101 gtacgtgctg gctgcctcgc agacccgcga caaggacgcg ctgacccagg aaggcgtggg
    14161 caaggtcctg aaggacctgg ccgccgacgg cttcgactac atcatctgcg actccccggc
    14221 cggcatcgag aagggcgcct tcctggcgat gtacttcgcc gaccgcgcgg tggtggtggt
    14281 gaacccggaa gtgtcttcgg tgcgcgactc cgaccgcatc atcggcctgc tcgattcgaa
    14341 gacccacaag gccgagtccg gccaggacgt gccggccttc ctgctgctga cccgctacac
    14401 cccggtgcgc gtggaaagcg gcgagatgct gagcatcgcc gacgtcgagg aagtcctcgg
    14461 cctgaaggcg atcggcgtga tcccggaatc gggcgacgtg ctcaacgcct ccaacaaggg
    14521 cgagccggtg atcctggatg tcgaatccgc tgccggccag gcctatgaag acgccgtcgc
    14581 gcgcatcctc ggcgaagaac gcccgatgcg cttcaccaac gtcgagaaga agggcttctt
    14641 cagcaagctg ttcggagggt aagcatgggc ctgtttgatt tcctcaaagc gaagaagacc
    14701 accgccgaaa ccgccaagaa ccgcctgcag atcatcatcg cgcaggaacg cagccaccgc
    14761 ggtggcccgg actacctgcc gctgctgcag cgcgagctgc tggaagtgat caagaagtac
    14821 gtgaacatcg acgtcgatgc agtgaaggtc gacctggtga aggatggcca gcacgacgtg
    14881 ctggacatct ccgtggcgct gcctgaaggc ccggacaaac cctgatgccc tgccccgccc
    14941 gtgcctgcat gggcggggcc gcgtgacccg catgaccgat acgacaaccg ccgtggacat
    15001 cacctgcgtg ggcgacatcg ccttcgccga tgcgcagtgc ctgctcgccg cgcatggcct
    15061 tcggctgcac cacgtggccg ccggtgaacc gattcccggc agctactggg gcgaaccgga
    15121 ggcgggcatc atcgccagca acgtgtacgt gcgcgatgac acgcccgtgc attcgatgct
    15181 gcacgaagcc tgccacctga tcgtgctgcc gccggagcgg cgtgcgcagg tgcacaccga
    15241 tgccaccgac tcggtggccg aggaagacgc tacctgctac ctgcagatcg tgctggccgg
    15301 gcagctgccc ggtgtcggca gcgaacggct gatggccgac atggatgcat gggggtatac
    15361 gtaccggctg gggtctacga aggcgtggtt cgagcaggac gcggaagacg cgaaagcctg
    15421 gttgatcgaa cgcggcttgc cggtggcgta a
//
LOCUS       DAOKIP010000089        15204 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.089,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000089 DAOKIP010000000
VERSION     DAOKIP010000089.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 15204)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15204)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15204
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.089"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..2484)
                     /locus_tag="QEL58_002269"
     CDS             complement(<1..2484)
                     /locus_tag="QEL58_002269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005414607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase I"
                     /protein_id="HDS1676730.1"
                     /translation="MPKHLLIVESPAKAKTINKYLGKDYTVLASYGHVRDLIPKEGAV
                     DPDNGFAMHYDVIDKNEKHVDAIAKAAKGADDILLATDPDREGEAISWHIAEILKERG
                     LVKDKPMQRVVFTEITPRAIKEAISQPREIASDLVDAQQARRALDYLVGFNLSPVLWR
                     KVQRGLSAGRVQSPALRMIVEREEEIEAFIAREYWSIAAECAHPSQHFNAKLIKLDGQ
                     KFEQFTITDGDTAEAARLRIQQAAQGSLHVTDVASKERKRRPAPPFTTSTLQQEASRK
                     LGFTTRKTMQVAQKLYEGVAIGDEGTVGLISYMRTDSVNLSQDALAEIRDVIARDYGI
                     ASLPDQPNTYQTKSKNAQEAHEAVRPTSALRTPAQVARFLTDDERRLYELIWKRAVAC
                     QMIPATLNTVSVDLSAGSEHVFRASGTTVVVPGFLAVYEEGKDSKSAEDEDEGRKLPA
                     MKPGDRVPLERIQAEQHFTQPPPRYTEAALVKALEEYGIGRPSTYASIIQTLLFRKYV
                     EMEGRSFRPSDVGRAVSKFLSSHFTRYVDYDFTAKLEDELDAVSRGEEEWIPLMARFW
                     EPFKELVEDKKESVDRAEASGARELGTDPKTGKPVSVRLGRFGPYAAIGSTAEDAEEK
                     PKFASLRPGQSMHTISLEDALELFLMPRALGEDNGEPVSVGIGRFGPFAKRGSTYASL
                     KKEDDPYTIDLARAVFLIEEKEEIARNRIIKEFEGSDIQVLNGRFGPYISDGKMNGKI
                     PKDREPASLTLAEVQQLMEETGKPVRKGFGAKKAAAKKAPAKKAAVKKEAAPKKATAK
                     KAPAKKAVKKAAAKKAPAKKAVKKAVKKAA"
     gene            complement(2678..3610)
                     /locus_tag="QEL58_002270"
     CDS             complement(2678..3610)
                     /locus_tag="QEL58_002270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005411197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HDS1676731.1"
                     /translation="MTEWYYAEGQQRQGPLPVQEIRQRFQRGQLNLDTLVWREGMAQW
                     AALRQVVDELELQTLADATAAAGSGGFDLRGDYAAIDNGTAPLPGTGALGSSPYSAPA
                     AAGGAGHAQPVMGGEVVYAGFWKRVAAYMIDYFVLFIPGSIIGAILGVVLGASMGAVG
                     SGESAIEVVAQLSSALINFAIGMAYYTWFHASKGGATLGKMAVGIKVVRSNGERLTKA
                     RAFGRYWAMLLSSFTLGIGFLMAAFTERKQGLHDMICDTLVVDRWAFTDQPQLQRREL
                     GTVTVLVLVLTGLLSLVGLALLVFAVGFIAKMAS"
     gene            complement(3660..4412)
                     /locus_tag="QEL58_002271"
     CDS             complement(3660..4412)
                     /locus_tag="QEL58_002271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019338922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4339 domain-containing protein"
                     /protein_id="HDS1676732.1"
                     /translation="MSEWFHAEGNRQQGPLPAEQLVELFRNNQISLDTLVWRDGLPQW
                     QPLRSVVDELGLIVPALDASAPIVDAEPEPVAPPPPQPPVLPPSTPYATSAPAGVVPA
                     PKKQLSGCALTAIIAGALLLVLVPIVAILAAIALPAYNDYTVRAKVAAAADALHPLQD
                     QVQHFADEEGRCPGANDAGFPAPGDFTRSGLSAVNIGRFDNGHCGIEATLSMPGKSID
                     GDLLWLEYDRDSGRWDCSGASDDKYLPPACRG"
     gene            complement(4452..4925)
                     /locus_tag="QEL58_002272"
     CDS             complement(4452..4925)
                     /locus_tag="QEL58_002272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017159357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF494 domain-containing protein"
                     /protein_id="HDS1676733.1"
                     /translation="MKESILDVLLYLFEHYFSEDADLIRDRDSLQNGLIQAGFSPTEI
                     NKAFDWLDALAAQRPSVSQARVDGPVRVYHGPELDKLDVECRGFLLYLEQHGILDADQ
                     RELVLDRAMALDQDELDLDDLKWVVLMVLFNQPGSEAAYAWMETQMFMDEPEPLH"
     gene            complement(4969..6096)
                     /gene="dprA"
                     /locus_tag="QEL58_002273"
     CDS             complement(4969..6096)
                     /gene="dprA"
                     /locus_tag="QEL58_002273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008268052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-protecting protein DprA"
                     /protein_id="HDS1676734.1"
                     /translation="MTKQADEALLRLVMAGGALAPRRALLQSTGNAAAAIAQGTANWR
                     AHGCTPEQCAALERPDARAWTAAQRWLEDDHHHLLAFTDPAFPPPLLEVPNPPLALFV
                     AGDPSLAWRPSVALVGSRSPTPGGRALAARFASGFVEAGLAITSGLAAGIDAAAHLAT
                     LDAGGCTVAVIGTGPDRAYPDSHARLQARIATEGAVLSEYLPGTAARPGHFPARNRLV
                     AGLALATVVVEAAQRSGALITARLAAEAGREVCALPGSVLNPRAAGCHRLIREGAALV
                     ERPEEVLELLAPALRQQLPGLQSRLATPTEQAPPALLPARWADDPDYQCLWRALDHNP
                     SSMDSLITRCGLTAPQVSSMLLAMELAGIVVCVHGRYCRTP"
     gene            complement(6227..7360)
                     /locus_tag="QEL58_002274"
     CDS             complement(6227..7360)
                     /locus_tag="QEL58_002274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006395834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HDS1676735.1"
                     /translation="MLLRFRTVVAAAMLTVAAYATAVEVNGGHPDTYVVRKGDTLWDI
                     AARFLQKPWLWPEIWQANPQIANPHLIYPGDVLSLAYLDRVTVAAQPGPRQEAPIDAI
                     PLAQVEPFLKQLSVVDSIEQLPQVVGLEDNRLRVSGGDAAYVNLADAQLGQRWAVVRP
                     TVRYAQPKPSEDLNANGDVTPGSGNLWKAYNAPNARRGVLGYELAQLATGTITRVADG
                     KAGASTLALDKSTGGREVRVGDRLVPVEARPYDLQFVPHVPAAGVEGVDVRVLAVTDM
                     FTAGGPRDVIAISAGRAQGVDNGTVFSLWRQGRHVANRLKYPTSSRMDDALSGSVGRV
                     ALPEEYAAHAMVFRTFDNVSYALVMQGVKPVRVGYNALHPDAK"
     gene            7487..7999
                     /locus_tag="QEL58_002275"
     CDS             7487..7999
                     /locus_tag="QEL58_002275"
                     /EC_number="3.5.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005911379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HDS1676736.1"
                     /translation="MALLPILEFPDPRLRTKAALIEAAEVTTPAFQELIDNMFLTMYD
                     APGIGLAATQVDVHKRFMVIDVSEEKNEPHVFINPEIVAKDGGRVYQEGCLSVPGIFA
                     DVTRADTITVKYLDRNGQEQQLEAGEVLATCIQHEMDHLDGKLFIDYLSPLKREMVRK
                     KLAKQRKHVA"
     gene            8120..9043
                     /locus_tag="QEL58_002276"
     CDS             8120..9043
                     /locus_tag="QEL58_002276"
                     /EC_number="2.1.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012481367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionyl-tRNA formyltransferase"
                     /protein_id="HDS1676737.1"
                     /translation="MRIVFAGTPEFAVSSLRAAARHHEVVAVYTQPDRPAGRGRGLAP
                     SPVKLEAVARGIPVYQPESLKDEAAQQQLRDLQPDLMVVVAYGLILPKAVLAIPTHGC
                     WNVHASLLPRWRGAAPIQRAIQAGDATTGVCLMQMEAGLDTGPVLLHQELPIAATDTG
                     GQLHDKLAELGAQVLSDGLGLLRAGIKPIARPQPEQGVTYAHKLDKAEAKLDWAQDAG
                     ALARTVRAFNPWPIAEATLAGERVRIHGAVALDEAHGQAPGTVLAASRDGIDIACGQG
                     VLRLRVLQREGGKAITAADYLNARRDLRVGA"
     gene            9047..10378
                     /gene="rsmB"
                     /locus_tag="QEL58_002277"
     CDS             9047..10378
                     /gene="rsmB"
                     /locus_tag="QEL58_002277"
                     /EC_number="2.1.1.176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008268814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(967)-C(5))-methyltransferase
                     RsmB"
                     /protein_id="HDS1676738.1"
                     /translation="MSKQNDFSIAKAAPGAATRMLAARVLAQVFTRGRSLKAELAWAL
                     PKLADSRDRALLEALCFAVLRRRSTYDAALQGWMQKPLSARDADLRTLLMVGFAQLDV
                     LELPAHAALSATVDAARALGRERQAGLVNAILRRAQREGFPEQPARDAFPEWLAEAIE
                     RDWPAQAEAVFNESLQPAPLWLRANRQHGGRDKALAALAEAGIAAEPSALSPDALRLA
                     APVAVNQLPGFADGALSVQDLSAQCAADALAPAAGSRVLDACAAPGGKSAHLLERDPS
                     LRLLALDIDARRLARARDTYARTGVGEHAQTLAADASDPGAWWDGVPFDAILLDAPCS
                     ATGVIRRQPDVMFHRRAEDIDALVGVQARLLEACWSMLRPGGVLLYATCSILRAENID
                     QVRAFLKWHPDAEAQPLGDAFGVDCEGVARQRLPGDNDADGFFYARLIKAG"
     gene            10401..12122
                     /locus_tag="QEL58_002278"
     CDS             10401..12122
                     /locus_tag="QEL58_002278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012481365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HDS1676739.1"
                     /translation="MLKTHASRQTWLLVVMALLVLGAGLGLRDPWPSDEPRFALVAKQ
                     MVDSGYWLFPHRGPELYSDKPPMLMWWQATLYGLVGHWRVAFLLPSLLAALGTLWCVV
                     DLGRRLWTRRVGLYAGWALLFALQFTFQAKKAQIDPLLVLFITLANYGLLRHLLLGPA
                     WRWWWLGWFFAGIGVITKGVGMLALLMIVPAALAAALHWPRVRLHAGDVRFWLAPLWF
                     LLAVSLWLAPMIMAALATGLDPYRAYMDDILFRQTARRYMQSWDHHQPWWYFLAIMPS
                     MWIPAFLLLPWALPAWCRRLRRRDPRYLLPLAWWLLVVLFFSIPHGKRDVYILPALPM
                     FCLALAPLLPGLLKRRDVQGVLGAFAALLAAGLTLIGALALLGDPGFEIRLTHGRGLA
                     PGATDALAWTALAMGIWGGLSLWASGRGRRHLAVISTLAGIWVLYGVLAYPLLNDSSS
                     ARGLMREVGARIGPQAELGLVAWKEQNLLMADRPAATFGFEDRWHEQLQAAVRWQRLF
                     PQRRWLLVNEDALQACIDRPRAEMAGVSNRRRWWLVPADAVAGTCRPTAAELEHERRL
                     QGAGVAD"
     gene            complement(12133..13254)
                     /locus_tag="QEL58_002279"
     CDS             complement(12133..13254)
                     /locus_tag="QEL58_002279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005414598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HDS1676740.1"
                     /translation="MKILYTNFHYGDGGGHTTYIVSLARALHGRHALHVAAPADSRLL
                     RTVAAEGIASTLPVDFGSGLPTLPQQLAEQRALRRLVHEQNIDLVHVNGARDHRVVMQ
                     ALFGLRRPPILLTKHNSKRTDTVGNALRARWATDRLIAVSADTKRLLEQGPYRRCPID
                     VVRNGVDLERYSPLPAGAGHALRQQWTQDPEALVLVSNAGTDDYKGWIDLARAIARLP
                     DAIRPRVHMAVAGHLPSAQQREQVQALGDVAAQVHFTGLLADTRVLIAAGDIGFVLSH
                     DIETISFACREMMASGKPMLVSDFAGLPENIEQGVDGWVVATRDIDAIAAQVAALYAQ
                     RDALPGHGHAARRHAQREFGLQTFADATLASYEAALAGR"
     gene            complement(13299..14117)
                     /locus_tag="QEL58_002280"
     CDS             complement(13299..14117)
                     /locus_tag="QEL58_002280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005414597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HDS1676741.1"
                     /translation="MSSTTAPIERPRISACIIAFNEAGRIGDCLASLAFCDEIVVVDS
                     QSTDATVALAEAAGARVLQRRFEGFRSQKAFCVEQASHDWVLCLDADERISPELRTAI
                     EQARDGGFAGHAGYRFARLSEYFGRFLRHGNAYPDRVMRLFDRRRGGWRGKREIHEAA
                     SVDGSVGTLHGDLIHYPYRSLQQQLAKTEKYARMMAEHEFARGKRATLGKLVLAPAWR
                     FWRGFLFRGGFRDGWHGLVYAYVRANYVRQKTIMLWMLGNGQAVADPAAPAERS"
     gene            14116..15174
                     /locus_tag="QEL58_002281"
     CDS             14116..15174
                     /locus_tag="QEL58_002281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017157061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-glycerol glycerophosphotransferase family
                     protein"
                     /protein_id="HDS1676742.1"
                     /translation="MMAGYLLFATERYALPILAPLAQALHASGQDVAAWFEGGAAGSH
                     LPGVPNIGLKQALAMRPRAVFSAANWVPTFLSGAKVQLFHGFNVEKRDSARGHFRVRG
                     MFDLYCTQGPATTSPFRQIAAQQGHFAVAETGWPKLDPLFRDDGGESAALRAPAAGRP
                     VILFGSTFTERLSAAPHLHAQIAADIAAGDRYWLLTLHPKCAPELFERYRALAGANAR
                     FVEPEQVMAAQRAADVLVSDTSSIVSEFIVQHKPVVTFRNRVPKPHMIDFDDPAQLPA
                     MLQRALHPDAALQAEIVRYADAIHPYRDGRSSERVIAATEDFLSGEMGALRRKPFGTW
                     LRDLQIRKDLGYWGPSQR"
BASE COUNT         2223 a         5074 c         5310 g         2597 t
ORIGIN      
        1 ggctgccttc tttacggcct tctttacggc cttcttggcc ggggccttct tcgcggcagc
       61 cttctttacc gctttcttgg ccggggcctt cttggcggtg gccttcttcg gcgccgcttc
      121 cttcttcacc gccgccttct tggcaggtgc cttcttggca gcggccttct tggcaccgaa
      181 gcccttgcgc accggcttgc cggtttcttc catcagctgc tgcacttcgg ccagggtcag
      241 cgaggccggc tcgcgatcct tggggatctt gccgttcatc ttgccatcgc tgatgtacgg
      301 gccgaagcgg ccgttcagca cctggatgtc gctgccctcg aactccttga tgatccggtt
      361 gcgcgcgatc tcttccttct cttcgatcag gaacacggcg cgggccaggt cgatggtgta
      421 cgggtcgtct tccttcttca gcgaggcata ggtgctgcca cgcttggcga acggaccgaa
      481 acgaccgatg ccgacgctga ccggctcgcc gttgtcctcg cccagcgcac gcggcatcag
      541 gaacagttcc agcgcgtctt ccagggagat ggtgtgcatc gactggccgg ggcgcagcga
      601 ggcgaacttg ggcttttcct cggcgtcctc ggcggtgctg ccgatggccg cgtacggccc
      661 gaagcggccc agccgcacgc tcaccggctt gccggtcttc gggtcggtgc cgagctcgcg
      721 ggcgccactg gcctcggcac ggtcgaccga ttccttcttg tcttccacca gctccttgaa
      781 cggctcccag aagcgggcca tcagcgggat ccactcctcc tcgccacgcg agacggcgtc
      841 gagctcgtcc tcgagcttgg cggtgaagtc gtagtccacg tagcgggtga agtggctgga
      901 caggaacttg gacaccgcac ggccgacatc ggacgggcgg aagctgcggc cttccatttc
      961 cacgtacttg cggaacagca gggtctggat gatcgaggcg taggtcgagg gacggccgat
     1021 gccgtactct tccagcgcct tcaccagcgc cgcttcggtg tagcgcggcg gcggctgggt
     1081 gaaatgctgc tcggcctgga tgcgctccag cggcacgcgg tcgccgggct tcatcgccgg
     1141 cagcttgcgg ccttcgtctt cgtcctcggc gctcttgctg tccttgcctt cctcgtacac
     1201 ggccaggaag ccgggcacga ccacggtggt gccgctggcg cggaatacgt gttcgctgcc
     1261 ggccgacaga tcgacgctga ccgtgttgag cgtggccgga atcatctggc aggccaccgc
     1321 acgcttccag atcagctcgt acaggcggcg ctcgtcgtcg gtcaggaacc gcgcgacctg
     1381 ggccggggta cgcagtgccg aggtcgggcg tacggcttcg tgcgcttcct gggcgttctt
     1441 cgacttggtc tggtaggtgt tcggctggtc cggcagcgag gcgatgccgt aatcgcgggc
     1501 gatcacgtcg cggatctcgg ccaacgcatc ctgcgacagg ttcaccgagt cggtacgcat
     1561 gtacgagatc aggccgacgg tgccttcgtc gccgatggcc acgccttcat acagcttctg
     1621 cgccacctgc atggtcttgc gggtggtgaa accgagcttg cgcgaggctt cctgctgcag
     1681 ggtggaggtg gtgaacggcg gcgccgggcg gcgcttgcgc tccttgctgg ccacgtcggt
     1741 gacatgcagc gagccctgcg ccgcctgctg gatgcgcagg cgggcggctt cggcggtgtc
     1801 gccgtcggtg atggtgaact gctcgaactt ctgcccgtcc agcttgatca gcttggcgtt
     1861 gaagtgctgc gaggggtgcg cgcactcggc ggcgatcgac cagtattcgc gggcgatgaa
     1921 ggcttcgatc tcttcctcgc gctcgacgat catgcgcagc gccgggctct gcacgcggcc
     1981 ggcggacagg ccgcgctgga ccttgcgcca caggaccggg gacaggttga aaccgaccag
     2041 gtagtccagc gcgcggcgcg cctgctgggc atcgaccagg tcactggcga tctcgcgtgg
     2101 ctggctgatc gcctccttga tggcgcgtgg ggtgatctcg gtgaacacca cgcgctgcat
     2161 cggcttgtcc ttgaccagcc cgcgttcctt caggatctcg gcgatgtgcc agctgatcgc
     2221 ctcaccctcg cgatccgggt cggttgccag caggatgtcg tcggcgccct tggcagcctt
     2281 ggcgatcgca tcgacgtgct tctcgttctt gtcgatcacg tcgtagtgca tggcgaaccc
     2341 gttgtccggg tcgaccgcgc cttccttcgg aatcaggtca cgcacatgcc catacgaggc
     2401 caggaccgtg tagtccttgc cgaggtattt gttgatcgtc ttggccttgg ccggcgattc
     2461 gacgatgagc aggtgcttgg gcatggcagc agggtctgtg gggcgaaccg tggggaaggg
     2521 gccgctaggg tggagcaaac ggccgcatta gtgaagcggc cacgggaaaa tccataaact
     2581 gaacgcccgg taatgtgccg ggcgttcagg tttcacctta ttagaggaat cacgcccggc
     2641 cagcccatgt caagcagcca ggcgtgacga tggccgttca ggaggccatc ttggcgatga
     2701 agccgaccgc gaagaccagc agggccaggc ccaccagcga cagcaggccg gtcagcacca
     2761 gcaccagcac ggtgaccgtg cccagctcgc ggcgctgcag ctgtggctgg tcggtgaagg
     2821 cccagcggtc gaccaccagg gtgtcgcaga tcatgtcgtg caggccctgc ttgcgctcgg
     2881 tgaaggccgc catcaggaag ccgatgccga gggtgaagct gctcagcagc atggcccagt
     2941 agcgaccgaa cgcgcgcgcc ttggtcaggc gttcgccatt gctgcgcacg accttgatgc
     3001 caaccgccat cttgcccagc gtggcgccac ccttggaggc atggaaccag gtgtagtacg
     3061 ccatgccgat ggcgaagttg atcagtgcgc tggacagctg cgcgaccacc tcgatggccg
     3121 attcaccact gcccaccgcg cccatgctgg cgccgagcac cacaccgagg atggcgccga
     3181 tgatgctgcc ggggatgaac agcacgaagt agtcgatcat gtaggcggcc acgcgcttcc
     3241 agaagcccgc gtagaccact tcgccgccca tgaccggctg cgcatggcca gcgccgcctg
     3301 cggcggcagg cgcgctgtat ggcgagctgc cgagggcgcc ggtaccgggc agcggcgcgg
     3361 tgccgttgtc gatggcggca tagtcgccgc gcaggtcgaa gccgccgctg ccggcggccg
     3421 ccgtggcatc ggccagcgtc tgcagttcaa gctcgtcgac cacctggcgc agcgccgccc
     3481 actgcgccat gccttcgcgc cagaccagcg tgtccaggtt cagttggccg cgctggaagc
     3541 gctggcggat ctcctggacc ggcagcgggc cctggcgttg ttgtccttcg gcgtaatacc
     3601 actcagtcat tgcatgttcc ctgttggatc gtccttggag gtaccggtac gcgcgcggct
     3661 cagccgcggc acgccggcgg caggtacttg tcgtcgcttg cgccgctgca gtcccagcgg
     3721 ccgctgtcgc ggtcgtattc cagccacagc agatcgccgt cgatgctctt gcccggcatc
     3781 gacagcgttg cctcgatacc gcagtggccg ttgtcgaagc ggccgatgtt caccgccgac
     3841 aggccggacc gggtgaaatc gccaggggcg gggaagccgg catcgttggc gcccgggcag
     3901 cgaccttcct catcggcgaa atgctgcacc tggtcctgca gcgggtgcag ggcatcggcc
     3961 gcagcggcga ccttggcgcg cacggtgtag tcgttgtagg ccggcagggc gatggcggca
     4021 aggatggcca cgatcggcac cagcaccagc agcagagcgc ctgcgatgat cgcagtgagc
     4081 gcgcagccgg acagctgctt cttcggcgcc ggcacgacgc cggccggtgc gctggtggcg
     4141 tacggggtgg agggcggcag caccggtggc tgcggcggcg gcggtgccac cggttccggc
     4201 tcggcgtcga cgatcggcgc agaagcgtcc agtgccggaa cgatcaggcc gagttcgtcg
     4261 acgacgctac gcaacggctg ccattgcggc aggccgtcgc gccacaccag ggtgtccagg
     4321 gagatctggt tgttgcggaa caactcaacc aactgttccg ccggcagcgg gccctgctgc
     4381 cggttgcctt ctgcgtggaa ccactcgctc acggggacgc tcctgaatgc gctatgcccc
     4441 caagtgtacg gtcagtgcag gggttctggc tcgtccatga acatctgcgt ctccatccag
     4501 gcataggccg cttcggagcc gggctggttg aacagcacca tcagcacgac ccacttcagg
     4561 tcgtccaggt ccagttcgtc ctggtccagg gccatcgccc ggtccagcac cagctcgcgc
     4621 tggtcggcat cgaggatgcc gtgctgttcc agatacagca ggaaaccgcg gcattccacg
     4681 tccagcttgt ccagctcggg gccgtggtag acgcgcacgg ggccatcgac ccgggcctgg
     4741 gacacgctcg gccgctgcgc ggccagggca tcgagccagt cgaatgcctt gttgatctcg
     4801 gtagggctga aaccggcctg gatcaggccg ttctgaagcg aatcgcggtc acggatcagg
     4861 tccgcatctt cgctgaaata gtgttcaaac aggtacagca gtacgtccag gatgctctct
     4921 ttcattgccc ctcggcctgc gtcgcgcgac gctgtggagg tgaagaaact agggagttcg
     4981 acagtagcgg ccgtgtacgc acaccacgat tcccgccagt tccatggcca gcagcatgga
     5041 ggacacctgg ggcgccgtca atccacagcg cgtgatcagt gaatccatac tgcttgggtt
     5101 gtggtccagg gcccgccaca agcactggta gtcagggtcg tcggcccagc gcgccggcag
     5161 gagtgccggc ggtgcctgtt cagtgggggt ggccagccgc gattgcaagc ccggcagctg
     5221 ttggcgcagc gcaggggcca gcagctccag cacctcctcc gggcgctcga ccagcgcggc
     5281 gccttcacgg atcagccggt ggcagcccgc cgcgcgtgga ttgagcaccg aaccgggcag
     5341 ggcgcagacc tcgcgaccgg cctcggcggc caggcgcgcg gtgatcagcg ctcccgagcg
     5401 ctgggcggcc tcgaccacca ccgtggccag ggccagcccg gccaccagcc ggttgcgcgc
     5461 cgggaagtgc ccggggcggg ccgcggtgcc cggaaggtat tcgctgagca cggcgccctc
     5521 ggtggcgatg cgggcctgca gccgggcatg gctgtccggg taggcgcggt cggggccggt
     5581 accgatcacg gcgacggtgc agccgccggc gtccagggtt gccaggtggg cggctgcatc
     5641 gatgccggca gccagcccgc tggttatcgc caacccggcc tcgacgaagc cgctggcaaa
     5701 gcgggccgcc agcgcgcgac cgcccggcgt cggcgagcgg ctgccgacca gggccacgga
     5761 ggggcgccag gccaggctgg ggtcaccggc cacgaacagc gccagcggtg ggttgggtac
     5821 ctccagcaag gggggaggaa aggccgggtc ggtgaaggcc aggagatggt gatggtcgtc
     5881 ttccagccag cgctgcgcgg ctgtccacgc ccgcgcatca gggcgttcca gtgcggcgca
     5941 ctgctccggt gtgcagccgt gtgcgcgcca gttcgcagtg ccttgcgcga tggctgcggc
     6001 cgcgttgccc gtgctctgca gcaatgcccg tcgcggcgcc agtgcgcccc ctgccatcac
     6061 caggcgcagc agcgcctcat cagcttgctt ggtcattccc cactatcgac cgcatgcaac
     6121 aaaggcgccc tcgggcgcct tcgcatgtac gtgtcaggat ttgccggagg tgtctgccgg
     6181 ccagcggccg gcactacctg aggtggccgg ggcagcccgg caaccgttac ttcgcgtccg
     6241 ggtgcagcgc gttgtagccc acccgcaccg gcttcacgcc ctgcatcacc agcgcgtagc
     6301 tgacgttgtc gaaggtgcgg aacaccatcg catgcgccgc atattcctcc ggcagcgcaa
     6361 cccggcccac gctgccgctg agcgcatcgt ccatgcgcga cgacgtcggg tacttcaggc
     6421 ggttggccac atggcggccc tgccgccaca gcgagaacac ggtgccattg tcgacgccct
     6481 gggcgcggcc ggccgaaatc gcgatcacgt cgcgcgggcc gccggcggtg aacatgtcgg
     6541 tcaccgcgag cacgcgcacg tccacgcctt ccacgcctgc ggccggcaca tgcggcacga
     6601 actgcaggtc ataggggcgg gcctcgaccg gcaccaggcg gtcgccgaca cggacttcac
     6661 ggccacccgt gctcttgtcc agcgccagcg tggaggcccc ggccttgccg tcggcaaccc
     6721 gggtgatggt gccggtggcg agctgggcca gttcatagcc cagcacgccg cggcgcgcgt
     6781 tgggtgcgtt gtaggccttc cacaggttgc cgctgcccgg ggtgacgtcg ccgttggcgt
     6841 tcaggtcttc gctcggcttg ggctgggcgt agcgcacggt cgggcggacc acggcccagc
     6901 gctgtcccag ctgggcatcg gccaggttaa cgtaggcggc atcgccacca gacacgcgca
     6961 gtcggttgtc ctccaggccg actacctggg gcagctgctc gatgctgtcg accacgctca
     7021 gctgcttcag gaacggctcg acctgggcca gcggaatggc gtcgatcggg gcctcctggc
     7081 gcgggcccgg ctgggccgcc acggtcaccc ggtccagata ggccaggctg agcacgtcac
     7141 cgggatagat caggtgcgga ttggcgatct gcggattggc ctgccagatc tccggccaca
     7201 gccacggctt ctgcaggaaa cgtgcggcga tatcccacaa cgtatcccct tttcggacca
     7261 cataggtgtc cgggtgcccg ccattcactt ccacggcggt agcataggca gccacggtca
     7321 gcatcgccgc ggcgacgacc gtacgaaaac gaagcaacat aggtgtgaag ccctgattcc
     7381 ccaacaggtc cgcgcactat agtccagaaa ccggggcgca aggcaagcgt tggagctaga
     7441 atctgcgacg tatgccggcg tgccggcccc ctatccggaa acagccatgg cccttctccc
     7501 cattctcgag ttccccgatc cgcgcctgcg taccaaggct gcgttgatcg aagccgccga
     7561 agtcaccacg ccggccttcc aggaactgat cgacaacatg ttcctgacca tgtacgacgc
     7621 gccgggcatc ggcctggccg ccacccaggt ggatgtgcac aagcgcttca tggtcatcga
     7681 cgtcagcgaa gaaaagaatg aaccgcatgt gttcatcaac ccggaaatcg tcgccaagga
     7741 cgggggccgg gtgtaccagg agggctgcct gtcggtgccg ggcatcttcg ccgacgtgac
     7801 ccgcgccgat accatcaccg tgaagtacct ggaccgcaac ggccaggaac agcagctgga
     7861 ggccggcgaa gtgctggcga cctgcatcca gcacgagatg gaccacctgg acggcaagct
     7921 gttcatcgac tatctgtcgc cgctcaagcg cgagatggtg cgcaagaagc tggccaagca
     7981 gcgcaagcac gtggcgtgat cgccgatccg ggccaccctt cgggtggccc ctgcctgcgc
     8041 gatgcgcgcg ggctgtacgg cgccggccga cggcgccgtt ttctttcctg cacgaatcca
     8101 tcctgcaagt ggggtagcca tgaggattgt ctttgccggt acgccggaat ttgcggtgtc
     8161 gtcgctgcgc gcggctgcgc gccaccatga ggtcgtggcg gtctacaccc agcctgatcg
     8221 cccggccggt cgtggccgtg gcctggcgcc gtcgccggtc aagcttgaag ccgtcgcccg
     8281 tggcatcccg gtctaccagc ccgaatcgct gaaggacgaa gcggcccagc agcagctgcg
     8341 cgatctgcag ccggacctga tggtggtggt ggcctacggc ctgatcctgc ccaaggcggt
     8401 gctggccatt ccgacccatg gctgctggaa cgtgcacgcc tcgctgctgc cgcgctggcg
     8461 cggtgccgcg ccgatccagc gtgcgatcca ggccggcgac gcaaccaccg gcgtgtgcct
     8521 gatgcagatg gaggccggcc tcgataccgg cccggtgctg ctgcaccagg agctgccgat
     8581 tgccgccacc gataccggtg ggcagctgca cgacaagctg gccgaactgg gcgcgcaggt
     8641 gctgtccgat ggcctgggcc tgctgcgtgc cggcatcaag ccgatcgcac ggccgcagcc
     8701 ggagcagggc gtgacctatg cgcacaagct ggacaaggcc gaagcgaagc tggactgggc
     8761 gcaggacgcc ggcgcgctgg cgcgcaccgt gcgcgcgttc aatccgtggc cgatcgccga
     8821 ggcgacgctg gccggcgagc gcgtgcgcat ccatggcgcg gtggcgctgg atgaggccca
     8881 cggccaggcg ccgggcacgg tgctggcggc cagccgcgac ggcatcgaca tcgcctgtgg
     8941 ccagggcgtg ctgcgcctgc gcgtactgca gcgcgaaggc ggcaaggcga tcaccgccgc
     9001 cgactacctc aatgctcgcc gcgacctgcg cgtgggggca taagcggtgt cgaagcagaa
     9061 cgatttctcc attgccaagg cggcgccggg cgcggccacg cgcatgctgg ccgcacgcgt
     9121 gctggcgcag gtgttcaccc gtggccgttc gctgaaggcc gaactggcct gggcgctgcc
     9181 gaagctggcc gacagccgcg accgcgcgct gctggaggcg ctgtgctttg ccgtgctgcg
     9241 tcgccgcagc acctatgacg cggcattgca gggctggatg cagaagccgc tgtcggcgcg
     9301 tgatgccgac ctgcgcacgc tgctgatggt cggttttgcg cagctggatg tgctggaact
     9361 gccggcgcat gccgcactgt cggccacggt cgatgctgcc cgtgcactgg gccgcgaacg
     9421 ccaggctggc ctggtcaacg cgatcctgcg ccgcgcgcag cgcgaagggt tcccggagca
     9481 gcccgcgcgc gatgccttcc cggaatggct ggccgaggcg atcgaacggg attggccggc
     9541 gcaggccgaa gcggtgttca acgaaagcct gcagcctgcg ccgctgtggc tgcgcgccaa
     9601 ccgccagcac ggcggccgcg acaaagccct ggcagcgctg gccgaagccg gcattgccgc
     9661 tgaacccagt gcgctcagtc ccgatgcgtt gcgcctggcg gccccggtgg cggtgaatca
     9721 gctgcccggc ttcgccgacg gcgcgctgtc ggtgcaggac ctgtcggcgc agtgtgcggc
     9781 ggatgcactg gcccccgctg ccggctcgcg cgtactggat gcctgcgcag cgcccggtgg
     9841 caaatcggcg cacctgctgg aacgcgaccc gagcctgcga ctgctggcgc tggatatcga
     9901 cgcccggcgc ctggcgcgcg cccgtgacac ctatgcccgt accggcgtgg gcgaacacgc
     9961 gcagaccctg gccgctgatg ccagcgatcc cggtgcctgg tgggatggcg tgccgttcga
    10021 cgcgatcctg ctggatgcac cgtgttcggc gaccggcgtg atccgccgcc agccggatgt
    10081 catgttccac cgccgcgccg aggacatcga tgcgctggtg ggagtgcagg cgcgcctgct
    10141 ggaagcctgc tggtcgatgc tgcgcccggg cggcgtgctg ctgtatgcga cctgctcgat
    10201 cctgcgtgcc gagaacatcg accaggtgcg cgcgtttctc aagtggcatc cggatgccga
    10261 ggcgcagccg ctgggcgacg cattcggcgt ggattgcgaa ggcgtggcgc gccagcgtct
    10321 gccaggcgac aacgatgctg acggtttctt ctacgcgcgt ctgataaaag caggctgaac
    10381 ccgctgccgt ttcgagtccc atgctgaaaa cccacgcgtc gcgacagacg tggctgttgg
    10441 tggtgatggc cctgctggtg ctgggggctg gcctcggcct ccgcgatcca tggccgtcgg
    10501 acgagccgcg cttcgcgctg gtggccaagc agatggtcga cagcggctac tggttgttcc
    10561 cgcatcgtgg gcccgagctc tactcggaca agccgccgat gctgatgtgg tggcaggcca
    10621 cgctgtacgg cctggtcggc cactggcgcg tggccttcct gctgccttcg ctgctggcag
    10681 cgctcggcac gctgtggtgc gtggtggatc ttggccggcg cctgtggaca cggcgggtcg
    10741 ggctgtatgc cggctgggcg ctcctgttcg cgctgcagtt caccttccag gcgaagaagg
    10801 cgcagatcga cccgctgctg gtgctgttca tcacgctggc caactatggc ctgctgcgcc
    10861 acctgttgct gggccccgcc tggcgctggt ggtggctggg ctggttcttt gccggcatcg
    10921 gggtgatcac caagggtgtg ggcatgctgg ccctgctgat gatcgtaccg gccgccctgg
    10981 cagcggccct gcactggcca cgcgtacgcc tgcatgcagg tgatgtccgc ttctggctgg
    11041 cgccgctgtg gtttctgctg gcggtgtcgc tgtggctggc accgatgatc atggccgcgc
    11101 tggccaccgg cctggacccc taccgggcct atatggacga catcctgttc cggcagaccg
    11161 cgcggcgcta catgcagtcc tgggaccatc accagccgtg gtggtacttc ctggcgatca
    11221 tgccatcgat gtggattccc gccttcctgc tgctgccctg ggcgttgcct gcgtggtgcc
    11281 gccggctgcg ccgccgcgac ccgcgttacc tgttgccgct ggcctggtgg ctgctggtcg
    11341 tgctgttctt ttccattccc cacggcaagc gcgatgtcta catcctgccg gccctgccga
    11401 tgttctgcct ggcgctggca ccgttgttgc cggggctgct gaagcggcgc gacgtgcagg
    11461 gcgtgctggg cgccttcgcc gcgttgctgg ccgcaggatt gacgctgatc ggggcattgg
    11521 cgctgctggg cgaccccggt ttcgaaatac gcctcaccca tggtcgcggc ctggcccctg
    11581 gcgctaccga cgcgctggca tggacggcgc tggcgatggg gatctggggc ggcctgagcc
    11641 tgtgggcaag cgggcgcggt cgccgccatc tggccgtgat ctcgacactt gcgggaatct
    11701 gggtgctgta tggcgtgctc gcctatccgc tgctgaacga ttccagttcg gcccgtggcc
    11761 tgatgcgtga ggtcggcgcg cgcatcggcc cgcaggccga gctggggctg gtggcatgga
    11821 aggagcagaa cctgctgatg gccgatcggc ctgcggcaac cttcggtttc gaagaccgct
    11881 ggcacgagca gctgcaggcg gccgtacgct ggcagcggct gtttccgcaa cgacgctggc
    11941 tgctggtgaa cgaggacgcc ctgcaggcct gcatcgatcg accacgcgcg gaaatggccg
    12001 gtgtttccaa tcgccgccgc tggtggctgg tgcccgctga tgcggtggcc ggcacctgca
    12061 ggccgacggc agcggagctt gagcacgaac gccgcctgca gggggccggc gtagcggatt
    12121 gaaggccggc cctcagcggc cggccagtgc tgcctcatag ctggccagcg tggcatcggc
    12181 gaatgtctgc aggccgaatt cccgctgcgc gtggcggcgg gcggcatggc catgtccggg
    12241 cagtgcatcg cgttgcgcgt acagtgccgc cacctgtgcg gcgatggcgt cgatgtcgcg
    12301 ggtggcgacc acccagccgt cgactccttg ttcgatgttc tcgggcaggc cggcgaagtc
    12361 gctgaccagc atcggcttgc cgctggccat catctcccgg caggcgaagg agatggtctc
    12421 gatgtcgtgg gacagcacga agccgatatc gccggccgcg atcagcacgc gggtatcggc
    12481 cagcaggccg gtgaagtgca cctgagctgc gacgtctccc agcgcctgca cctgttcgcg
    12541 ctgctgcgcg ctgggcaggt ggccggccac ggccatgtga acgcgggggc ggatcgcatc
    12601 gggcagccgt gcgatggccc gggccaggtc gatccagccc ttgtagtcat cggtgccggc
    12661 attgctgacc agcaccagtg cttctgggtc ctgggtccat tgctggcgca gtgcgtggcc
    12721 ggccccggcc ggtagcggcg agtagcgctc caggtcgacg ccgttgcgca ccacatctat
    12781 cgggcagcgc cggtacggac cctgttccag caggcgcttg gtatcggccg agaccgcgat
    12841 cagccgatcg gtggcccagc gtgcgcgcag cgcgtttcca acggtatcgg tacgtttgct
    12901 gttgtgcttg gtcagcagga tcggggggcg gcgcaggccg aacagcgcct gcatcaccac
    12961 gcgatggtcg cgcgcgccgt tgacgtggac caggtcgatg ttctgttcgt ggaccaggcg
    13021 gcgcagcgcg cgctgctcgg ccagctgttg cggcagggtc ggcaggccgc tgccgaagtc
    13081 gaccggcaac gtgctggcga tgccttcagc ggccacggta cgcagcaggc ggctgtcggc
    13141 tggggctgca acgtggagcg cgtgccggcc atgcagggcc cgcgcaaggg aaacgatgta
    13201 cgtcgtatgg ccgccaccgt cgccgtagtg gaagttggtg tacaggattt tcatgggggg
    13261 accttcgggc aacgcgctgt cagtgtgaca caggccgttc aggaccgttc cgcaggcgcc
    13321 gccggatcgg ccaccgcctg gccgttgccc agcatccaca gcatgatggt cttctgccgc
    13381 acgtagttgg cacgcacata ggcgtagacc aggccgtgcc agccgtcgcg gaagccaccg
    13441 cggaacagga agccacgcca gaatcgccag gccggagcca gcaccagctt gccgagcgtg
    13501 gcgcgcttgc cgcgtgcaaa ctcgtgctcg gccatcatcc gggcgtactt ctcggtcttc
    13561 gccagctgct gctgcagcga gcggtacggg tagtggatca ggtccccgtg cagggtgccg
    13621 acgctgccgt caacgctggc cgcctcgtgg atctcgcgct tgccgcgcca gccaccgcgg
    13681 cggcggtcga acaggcgcat tacccgatcc gggtaggcgt tgccatggcg caggaacctg
    13741 ccgaagtact ccgacaggcg cgcgaagcgg tacccagcgt ggccggcgaa gccgccgtcg
    13801 cgggcctgct cgatggccgt gcgcagttcc gggctgatgc gctcatcggc gtccaggcac
    13861 agcacccagt catggctggc ctgctcgacg cagaacgcct tctggctgcg gaacccctcg
    13921 aaccgccgct gcagcacgcg ggcgccggcg gcctcggcaa gggccacggt ggcatcggtg
    13981 gactgcgaat ccaccaccac gatttcatcg cagaaggcca gcgaggccag gcagtcgccg
    14041 atgcgcccgg cctcgttgaa cgcgataatg cacgccgaga tgcgaggccg ttcgatggga
    14101 gcggtcgtgg aggacatgat ggccgggtac ctgttgtttg cgacggagcg ctatgcgctg
    14161 cctattctcg ccccgttggc gcaggccttg cacgcgtccg ggcaggacgt ggccgcctgg
    14221 ttcgagggcg gcgcggccgg cagccacctg cccggggtgc ccaacatcgg cctgaagcag
    14281 gccctggcga tgcgcccgcg cgcggtgttc agcgccgcca actgggtgcc gaccttcctg
    14341 tccggcgcca aggtgcagct gttccatggc ttcaacgtgg agaagcggga cagtgcgcgc
    14401 ggtcatttcc gggtgcgcgg catgttcgac ctgtactgca cgcagggccc ggccaccacg
    14461 tccccgttcc ggcagatcgc cgcccagcag ggccacttcg cggtggccga gaccggttgg
    14521 ccgaagctgg acccactgtt ccgcgatgat ggcggcgaga gtgccgcgct gcgcgcgccg
    14581 gccgctggtc gcccggtgat cctgttcggt tcgaccttca ccgagcggtt gagcgcggcc
    14641 ccgcacctgc acgcgcagat cgcggccgac atcgccgccg gcgaccgcta ctggctgctg
    14701 acgctgcacc cgaagtgcgc gccggaactg ttcgagcgct accgcgcgct ggccggtgcc
    14761 aatgcccgct tcgtcgagcc ggagcaggtg atggccgcgc agcgcgccgc cgatgtgctg
    14821 gtgtcggaca cctcgtcgat cgtttcggag ttcatcgtcc agcacaagcc ggtggtgacc
    14881 ttccgcaacc gcgtgcccaa gccgcacatg atcgatttcg acgacccggc acagctgccg
    14941 gcgatgctgc agcgtgcgct gcatccggac gccgcgctgc aggcggagat cgtgcgttac
    15001 gccgatgcga tccatccgta ccgcgatggc cgctccagcg agcgggtgat cgccgcgacc
    15061 gaggatttcc tgtccggcga aatgggcgcg ctgcggcgca agccgttcgg cacctggctg
    15121 cgcgacctgc agatccgcaa ggacctgggc tactggggcc cgtcgcagcg gtgaggtagt
    15181 gccgtccgct ggccggcaaa cccg
//
LOCUS       DAOKIP010000090        15144 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.090,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000090 DAOKIP010000000
VERSION     DAOKIP010000090.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 15144)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15144)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15144
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.090"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            69..713
                     /locus_tag="QEL58_002282"
     CDS             69..713
                     /locus_tag="QEL58_002282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012511978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676743.1"
                     /translation="MHRARQHAASQTRERRHRLAHEAARLMAEGGIRDYHQAKLKAAS
                     RLGIHDDASLPRNTEIEDALREYQRLFSGPQHGNELQRRREAAMRALEFLHGFAPRLA
                     GPVLEGTADANSPVQLHLHSDDPEAVHRFLDEHGIPAESRTRRLRMDRERSLDVPVWV
                     FSAEELTFDLAVLPYDALRQAPLSPVDEKPMRRASVAQLRQVLAEAEITAYIGG"
     gene            complement(819..1565)
                     /locus_tag="QEL58_002283"
     CDS             complement(819..1565)
                     /locus_tag="QEL58_002283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008267247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676744.1"
                     /translation="MYGWVRQFINYRSFYLWRARYRYYTRNVDGWMLSSALCLACMAM
                     VLWYYWRVASVPPPRVHPEAAALRVENITHEAIRRIVSVRHGGSVPGEMFSTPEEVRA
                     GTLRTLQVRQLLDSAEAWQLKAHLLADMADYITATGSCFPYECWRVTHRLELLRAAQA
                     ENAAINEALAPVLAEPLDRMPNLDGGERTRVQSAWSDTFGDAYNQTWLLGDLQAMHAR
                     MMLEYPQRAGAPWLARLLTGDAEEPHLYPL"
     gene            complement(1635..5153)
                     /locus_tag="QEL58_002284"
     CDS             complement(1635..5153)
                     /locus_tag="QEL58_002284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014038324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YadA-like family protein"
                     /protein_id="HDS1676745.1"
                     /translation="MNRIYRRIWNAARQCWVVASELSSPRGKPAQTRLLMSALLLTTA
                     GGAFAANETDDLELASESSAGALRAQKGLIPLFSFAAPNSVASAIAPRGFYNQLAIVT
                     SGNYADAQVSGADVLALGSRAKIYGTESTGLGNYAETSGGYATAVGHFARAFGGHGTA
                     LGTKAYASGKGATALGHDAQATSGNALAIGSGARASYSESIAIGANSVAYESGTVSMG
                     NSVQRRRITNINAGESGYDAVNVNQLNNTNRNVATVEGIAYSARNIADTAQTAANNAK
                     SYADSALAKASIREGLLYQTSSSGTVRLGGSNSGTLLDVRTSAGGLRRVYGVANATLS
                     NSSNDAVNGSQLFATNQDVVVAKNHAAVANTNADAALIKIQALNGLISQTNSSSPLRL
                     GASNSGLLLDITSQNGSDRIITGVGKGDMTATSSQAVNGSQLYATDQAAQAALTAANF
                     AVAESTRSSYMLASGTQVTEGNRAKASDIGSLAFGYEALAEGRGALAVGRSARSKAQG
                     AIAFGDGARVLSNTSSDSIAFGTNASTSAEKNLIALGRQAAAGGGDGAVALGAGASAR
                     GENSVALGAGSSASGERQLSVGNSTIKRKIVNVAQGDVSARSEEAVTGAQLFATDQAV
                     RGAETAASDAIGKASDALAKATTLAGLVSEVSPTGDVRLGAGNSGSIVDVRNSTGSKR
                     RLSGLADGALIAGGADAVNGGQLFATDERAKAAHDVASDVASRVAEVEAQAKYTRVGG
                     GGPAVSAQAGLVGVALGDGAEASLLSEGGVALGSFAKASGKNSVALGRAADVDVDAER
                     GFALGVFSLVEEYEGVALGAGSVVRKGAMEAVAVGAGSIAEESNTVSFGSTAINRRLV
                     NVARGTAEHNATTVGQLNDSLAALGGGAKLDTNGGVIAPTYAVQNTRQRTVGDALTVL
                     DNAVVRNASRVDGMEGQLRSIFQDTANARADGFNQLTLAGAQGMVISNVANGLIAAGS
                     REAVNGGQLHAVQQQLNGRIDGLEQRVDGQGPAPQSRAMALASTEQDAAAPTPPATQD
                     DKVVADTGNAPKSSPAPQPKADAPESPKPQVDTAELEKMLARANDYSDGIAREVDARL
                     NKMDKRFNRMAAMSSAQTAMAMNTAGLATYNRLGAGVGYAEGESAMAVGYQRVLNDKG
                     SATFSLNGAFTNSGESSMGVGVGIGW"
     gene            complement(5223..5930)
                     /locus_tag="QEL58_002285"
     CDS             complement(5223..5930)
                     /locus_tag="QEL58_002285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019338756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein"
                     /protein_id="HDS1676746.1"
                     /translation="MKKIVFSLLPLILLVALAAHANLTIHPMRTSIEGKRSAQIRVYS
                     QSTQPQYVQAALRRIDNPASDNEREVEVEPHEAAITITPGKFALSGGGNRLIRLIPLQ
                     SVEKETAYRIYFEGVRGPEEIEREGEGGSQANVGVSLVWGALVNVLPADGEVALRLQG
                     NILHNIGTLRVGITSVAECGSAGACTAHDVSHSLYPDAALELPFQPKPGSTLQLRYRL
                     TRDGYREHVQTVAASAG"
     gene            complement(5951..7060)
                     /locus_tag="QEL58_002286"
     CDS             complement(5951..7060)
                     /locus_tag="QEL58_002286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilin protein"
                     /protein_id="HDS1676747.1"
                     /translation="MVVSALAVVVPRVWAQQPPQTDPPRGMFTQDVVMSWDRSSIPAD
                     IELWAPRTLLAYDTDLSKRYGELFMVCASATDTSTGRCPVEDMLVELNAETSVATRLT
                     EERSGLATNVDVTAAIYRADASVTCEIGYWHGKRYGIYSSVAQRCNRVVAAGTGVGLR
                     IKADDLLNLTAGHWKGVVELRLRRPPSEHLATYVFNFDFTVTDYDAVSIYLPAFEYGN
                     AHVNLDLRYDPIARMIGGRKDVDMCLYDGVGSSSEYLGVTVRDAGSRSPGGDGFSVWH
                     PDTTGDESERVDFDVLLDYAGNTRRMRNGVEEQLHGVDSTALRLVKLPKLDQPVYCVP
                     TPLTLLTPQFPSSSKRQGVYAGELKVELRVPTARP"
     gene            complement(7084..9816)
                     /locus_tag="QEL58_002287"
     CDS             complement(7084..9816)
                     /locus_tag="QEL58_002287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014038327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TcfC E-set like domain-containing protein"
                     /protein_id="HDS1676748.1"
                     /translation="MNSPAPAVTRLAMALALALAPTLAHARSVPAGFEDLVEGQTEQL
                     DVSLFGQSAGLSPVRVTLDEVQLLEPQRVAQALGLSAEAQAALLPALSQPMPRNSHLA
                     CRFGGAAAGCGYMAPPEDPASVHALYDEGEGVLRLFIAQQWIPGQTPDAHRFHNVTAN
                     AENAWLHRQTFNISGGRDYQSLSAQGAGTLGLFKRGHVAGEWNYNRQHYRRSGSRDDF
                     QLDSAYYRHDLGQEHYLQVGLMDRRNLSSTQGGTFAFGMLPLDRFRGVRAGTTYAYVD
                     ADGAMQASPLTVLLARDARVDAFESERLLQTFYLQAGVNQLDTRSFPMGSYNVTLRIY
                     EDGVLVRSEDAPFDKGGDWTDTRLQWFVQGGQRDERRSRSGDGEHALQAGVRFPLARD
                     LALTAGVADIAGFSYGELRLDVRRQFATQDLRGAFSVLRGSDGSSGQQHQLSYRRRAS
                     WNLYQQRMRGNACRFQDDSRDRLGCSDSLSGSMSLPLAGGSAYVGYTRRQTWRPAQAL
                     PGFDEDPLEGLLPWLPPDPLRPRREAQRSRTWQASYSRTDRWGEFSVSSRAGVWQQHN
                     DGNTNTPSSRDRGVFLSFALSRLQNGERGSSQRRYAVDARQPEHQRPDATYSVAQSLR
                     QEVDATYREANAELRATNNERYSATVGGQLQNPWGQTGITVGGYRQPGRSEFSYSANH
                     ASSFALSRRGLYWGGGATADAGLAVQVDDTDDFDLRGVAAELQVGGSRRQRLNLGERR
                     LMPLQAYQSHRADLQDASTVDGIASVRVSGVSGMRPLFLSPGRLVRMPVPIEVTYTFV
                     GSARDVAGLPLGGARILNAPVAGTSANGGFVADFPRREKTLYLLQDDQLLQCPLQVRE
                     RRSVVLLVGAVQCEPLAVAQLPAEIRQQARVTRLLQEQALIAVLPQTAATGETP"
     gene            complement(9871..10380)
                     /locus_tag="QEL58_002288"
     CDS             complement(9871..10380)
                     /locus_tag="QEL58_002288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019338759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HDS1676749.1"
                     /translation="MNVIIKKAALAAALATVSTSAFAIDAHITVYANVDATLAFQKED
                     GSALPDSVQLDYLPGIGLRPWKENTRIFSNDESKDIEVKLGSDLELRPTLGNPGARPV
                     PMTVILNGMTLTTAAQDLKATDIFDGAVQGRSIMLPLSLEQTTQGEIVAGDYDGMAVI
                     VMAQKATSP"
     gene            10546..10791
                     /locus_tag="QEL58_002289"
     CDS             10546..10791
                     /locus_tag="QEL58_002289"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676750.1"
                     /translation="MKPLKVWELLNISHAVFATFLIALRKHHETLDPEWLRPPCGGPR
                     IHALRNHQKKIAYRISSGIGTPSSHSSNIFISVLLKQ"
     gene            complement(10795..11889)
                     /locus_tag="QEL58_002290"
     CDS             complement(10795..11889)
                     /locus_tag="QEL58_002290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014038330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676751.1"
                     /translation="MSTRFDPPERGPLGPDVATVVTAPIVPPASESAVSWGAIFAGAV
                     AAAALSLILLILGVGLGLSSVSPWSFEGVSKETFGWSSIAWLTFTALAASGLGGYLAG
                     RLRTKWTLIHGDETYFRDTAHGFVSWAVATLLTAGLLTSAIGGVLGAGAKVAGATAGA
                     AASTAGVVTAAAGTAAAGNAQEGDLNYWVDSLFRSAARPAPGAPEAGAPPAPGTPPAP
                     GAMNDPAAPPPPAAPNAGPRPAGMTPPPRPMAGGPGGDRREVRAEVNRIIVNSLQGDG
                     LDPADTQYLSQLIARETGMSEAEAQARVTDVQTRMRAALEKAKTTAKQAADDARKATA
                     YAALWLFITLLIGAFFASLSATWGGRRRDL"
     gene            complement(12230..13507)
                     /locus_tag="QEL58_002291"
     CDS             complement(12230..13507)
                     /locus_tag="QEL58_002291"
                     /EC_number="2.3.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014038331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate synthase"
                     /protein_id="HDS1676752.1"
                     /translation="MSDLDQVTLNAGDKSVVLPVIKPTLGNDCVDIAKLTKETGYFTY
                     DSGFTATASCKSAITYIDGDKGVLLYRGYPIEQLSEKSSYVEVACLLINGERPSAEQL
                     KAFTDELAAEANVDASINTLIGSFAKDAHPMAILTAAIAQLSGIYHASLDLSDAEQRR
                     QAAVRLIAKVPTLSALIYRHGKGLPANKPDTSLDYVSRFLKQTFESADGQYELNQDVV
                     KALDLLFILHADHEQNASTSTVRLVGSTGANPYASVAAGVTALWGPAHGGANEAVLKM
                     LEEIGTADNVESAVLKAKDKTSGFRLMGFGHRVYKNFDPRAKVIGEMTGKVLKQLGVQ
                     DPLLDVAVKLEQAALQDEYFVARKLYPNVDFYSGIIYKALQIPTEMFTVMFALGRTSG
                     WVSHWLEQQVDPEMKIGRPRQVYTGSDVRDYQG"
     gene            complement(13804..14046)
                     /locus_tag="QEL58_002292"
     CDS             complement(13804..14046)
                     /locus_tag="QEL58_002292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004087863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type B 50S ribosomal protein L31"
                     /protein_id="HDS1676753.1"
                     /translation="MKADIHPNYRDVVFHDVTSDFKILTRSTMATKETIQWEDGNEYP
                     LVKVEISSASHPFYTGKHKVIDTSGRIDKFQKRYAR"
     gene            complement(14135..15073)
                     /locus_tag="QEL58_002293"
     CDS             complement(14135..15073)
                     /locus_tag="QEL58_002293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside hydrolase"
                     /protein_id="HDS1676754.1"
                     /translation="MTHKIPLLIDTDPGVDDALALLMAFADERHDVVALTIAAGNVGL
                     QYTVRNALKLCDIVGRADVPVFAGSPDPLLHPSVDAAHVHGRDGYGDVDLPPPSRQAE
                     AEHAALAILRLSHEHAGELMLVMLGPLTNLALALKLDPTLPQRIKRIVVMGGAVTCHG
                     NITPAAEFNIAFDPEAAHVVFTSFKHLLVSDWEATVAHGLPLQDAEKWLQADSDRARF
                     YELISRKTRGLSEDSKGGRWYTADAVAMAWALNPEGQLQVESRPLNVELNGTFSRGAT
                     IVDWNRQTGQPDNCDLLMAYDQQRFEALVRQALGAD"
BASE COUNT         2621 a         4952 c         4870 g         2701 t
ORIGIN      
        1 tgtccgcccc cacgcagatg tcacatccgt gcgctagtct gtagccaggt cgcaacagga
       61 gtcatcgcat gcatcgcgca cgccagcatg ctgccagcca gacccgcgag cggcgtcacc
      121 gcctcgccca cgaagccgcc cgcctgatgg ccgaaggcgg catccgcgac taccaccagg
      181 ccaaattgaa ggccgccagc cgcctcggca tccacgacga tgcctccctg ccccgcaaca
      241 ccgagatcga ggacgccctg cgcgagtacc agcggctgtt ctccgggccg cagcatggca
      301 acgaactgca gcgccgccgc gaagccgcga tgcgcgccct ggagttcctg cacggcttcg
      361 cgccgcgcct ggccggcccg gtgctggagg gcaccgccga cgccaacagc cccgtgcagc
      421 tgcacctgca cagcgacgac ccggaggccg tgcaccgctt cctggacgag cacggcattc
      481 ccgccgaatc gcgcacgcgc cgcctgcgca tggaccgcga gcgcagcctc gatgtgccgg
      541 tctgggtgtt cagtgccgaa gagctgacct tcgacctggc agtgctgccc tatgacgccc
      601 tgcgccaggc accactgtcg cccgtggacg agaagccgat gcggcgtgct tccgtggcac
      661 agttgcggca ggtgctggcc gaggccgaga tcaccgccta catcggcgga taacgcggcg
      721 cagcctctcg cgacgtgtgg tgggtgcgga ccgtcggtcc gcactttgct tcgagtatcc
      781 gggtacctga ccgaaaggca gccgggcacg gctcggcgct acagggggta caggtgcggc
      841 tcttccgcat ccccggtcag caagcgcgcc agccacggtg cgcccgcgcg ttgcgggtat
      901 tccagcatca tccgtgcgtg catggcctgc agatccccca gcaaccaggt ctggttgtag
      961 gcatcgccga acgtatcgga ccaggcgctc tgcacgcgcg tgcgctcacc gccatcaagg
     1021 ttcggcatcc tgtccaacgg ctcggccagc accggcgcca gcgcctcgtt gatcgctgcg
     1081 ttctccgcct gcgccgcacg cagcagctcc aggcgatggg tcacccgcca gcactcgtag
     1141 gggaagcagc ttccggtggc ggtgatgtag tcggccatgt cggccagcag gtgggccttc
     1201 agttgccatg cctctgcact gtccagcagc tgccgcacct gcagcgtgcg cagtgtgccg
     1261 gcgcggacct cttcgggcgt gctgaacatc tcgccaggca cgctgccacc gtgccgcaca
     1321 ctcacgatgc ggcggatggc ctcatgggtg atgttttcca cgcgcagcgc cgccgcttcg
     1381 ggatgcacgc gtgggggcgg cacgctcgcc acccgccagt agtaccacag caccatcgcc
     1441 atgcacgcca ggcacagcgc gctggacagc atccagccgt ccacattgcg tgtgtagtac
     1501 cgatagcgcg cacgccacag gtagaagctg cgatagttga tgaactggcg gacccatccg
     1561 tacatcgcct tctcctcggc aagcgccccg gcgcggcagg gttcgctacg cgcaccacgc
     1621 cggggctcca tggcttacca gccgatgccc acacccacgc ccatgctgct ttcaccactg
     1681 ttggtgaaag caccattgag gctgaaggtg gccgaaccct tgtcgttcaa cacgcgctgg
     1741 taacccaccg ccatcgccga ttcgccctcg gcatagccca cgcccgcacc gaggcggttg
     1801 taggtggcca ggccggcggt gttcatcgcc atcgcggtct gcgcgctgct catcgccgcc
     1861 atgcggttga agcgcttgtc catcttgttc aagcgcgcat ccacttcgcg ggcgatgcca
     1921 tcgctatagt cgttggcgcg ggccagcatc ttctccagct cggcggtgtc gacctgcggc
     1981 ttgggtgatt ccggcgcatc agccttgggc tgcggcgcgg gcgaggactt cggtgcgttg
     2041 ccggtatcgg cgacgacctt atcgtcctgc gtggcgggcg gcgtgggtgc cgctgcgtcc
     2101 tgctcggtgg atgccagcgc catggcacgc gactgcggcg ccgggccctg gccgtctaca
     2161 cgctgttcca gcccgtcgat gcggccattg agctgctgct gcaccgcgtg cagctggccg
     2221 ccgttgaccg cctcgcggct gcctgcggcg atcaagccgt tagccacgtt ggagatgacc
     2281 atgccctgcg caccggcgag ggtgagctga ttgaagccat cggcacgggc gttggcggtg
     2341 tcctggaaga tggaacggag ctggccttcc atgccgtcga cgcgggaggc gttgcggact
     2401 accgcgttat ccagaacagt cagggcgtcg cccaccgtac gctggcgcgt gttctgtact
     2461 gcgtaggtag gcgcaatcac gccgccattg gtatcaagct tcgcgccgcc gccgagagcg
     2521 gcgaggctgt cgttcaactg gccaacggtg gtggcgttgt gttcagcggt gccacgggcg
     2581 acgttaacaa gtcggcgatt gatcgcagta gagccaaagg aaacggtgtt tgactcttct
     2641 gcgatagagc ctgcacctac cgcaaccgcc tccatcgccc ccttcctgac aacgctgcca
     2701 gctccaagcg ccacaccttc atactcctcg acaagggaaa agacgcccag agcgaaaccc
     2761 ctctctgcat ccacgtcgac gtcggccgca cgacccaatg caacggaatt ctttcccgat
     2821 gccttggcaa aactacccaa cgccacaccg ccctcactga ggagcgacgc ctcagcgcca
     2881 tcgcccaatg cgactcccac taggccagct tgcgcgctca ctgcgggccc gccacctccc
     2941 acgcgcgtgt acttggcctg cgcctccact tccgcaaccc tggaagcaac atcactggca
     3001 acgtcatgcg cagccttcgc gcgctcatcg gtagcaaaga gctggccgcc gttaacggcg
     3061 tccgctccac cagcgatcaa ggcgccatct gcgagaccac tgagccggcg cttgctccca
     3121 gtgctattgc gcacgtccac gatagagccg gaattccctg cacccaatcg gacatcacca
     3181 gttggagaga cctcactcac caggcctgcc agcgtcgtgg cctttgcaag tgcatcgctc
     3241 gccttcccga tggcatcgct tgcggcagtc tccgcgccac gcacagcctg atcggttgca
     3301 aacaactgcg cgccagtcac tgcttcctcg ctcctggctg acacatcgcc ctgagcgaca
     3361 tttacgatct tgcgcttgat ggttgaatta cctacagaca gctgcctctc accagacgca
     3421 gaagaccctg cacccagcgc caccgaattc tcaccgcgcg cgctcgcacc cgcgcccagt
     3481 gccacagcac catcaccacc acctgcagcg gcttgcctac caagcgcaat gaggttcttc
     3541 tccgcgctcg tactcgcatt ggtgccgaat gcaatgctgt cggatgacgt gttcgacaga
     3601 acacgcgcgc cgtcgccgaa cgcaatcgca ccttgcgcct tggacctggc gcttcgaccc
     3661 actgccaatg cacctcgccc ctcggccaag gcttcgtagc caaaagcgag cgaaccgata
     3721 tctgacgcct tggcgcgatt tccctcagtg acttgagttc ctgaggccaa catgtaagag
     3781 ctgcgggtcg attcagctac agcgaagttc gccgctgtca gcgccgcttg cgcagcttga
     3841 tccgtggcat acagttgact gccattgact gcctgggaac tggtggccgt catgtccccc
     3901 ttaccgacgc ccgtaataat tctgtccgag ccgttctgac tggtgatgtc gagcagtagc
     3961 ccggaatttg aggcccccaa acgcagcggg ctactggagt tggtctggct gatcagtcca
     4021 ttcaacgcct ggatcttgat cagtgcggca tcggcattgg tgttcgcaac ggctgcgtgg
     4081 ttctttgcga ccacaacgtc ctggtttgta gcaaagagct ggctgccatt gaccgcgtcg
     4141 ttgctgctat tgctcaacgt tgcatttgct acgccgtaca cgcggcgcag gcctccggca
     4201 ctggtacgga cgtcaagcag cgtcccgctg ttgcttccgc cgaggcgaac cgtgccactg
     4261 cttgaagtct ggtagagcaa cccctcgcgg atgctggcct tggcgagggc gctgtctgca
     4321 tagctcttcg cattattagc cgccgtctgc gcagtgtcag cgatgttcct tgccgaatag
     4381 gcaatgcctt ctactgtcgc aacgttgcga ttcgtgttgt tcagctggtt tacgttcacc
     4441 gcgtcgtaac cagactctcc cgcgttaata ttagtgatac gacgccgttg cacgctgtta
     4501 cccatcgaaa ccgttccgga ttcgtaggct acagagttcg cgccaatcgc aatcgattca
     4561 gaataggaag ctcgtgcacc gctgccgatc gcaagcgcat tacctgaagt tgcctgcgca
     4621 tcatgaccaa gcgcggttgc cccttttccg ctggcgtacg ctttggtacc aagggcggtg
     4681 ccatgcccac caaacgccct ggcgaaatgc cccacggcag tagcgtatcc gccgctggtt
     4741 tctgcgtagt ttcccaaacc agtggattcg gtgccgtaga tcttcgcgcg tgagccaagc
     4801 gccagaacat cagcaccgct gacctgtgca tctgcatagt ttccgctggt tacaatggcc
     4861 aactgattgt agaagccacg cggtgcgatg gccgatgcga ctgaattcgg cgcagcgaag
     4921 gaaaacagag ggatcaaccc cttctgagcc cgcagtgctc cagcactgga ttccgaagcc
     4981 agctccaggt catccgtttc attggccgca aaggccccac ctgccgtcgt cagcagaagt
     5041 gcagacatca gcaaccgcgt ctgtgcgggc ttgccgcgcg gcgagctcag ctcactggcc
     5101 accacccagc actgccgggc ggcattccag atacgtcgat agatacggtt cattgaagct
     5161 ccttaacaac acagggaaaa atcggtccgc gcgggtgcgc aggtcaaaga atgggaatgg
     5221 actcaaccgg ctgacgcggc gacggtctgc acgtgctcgc ggtagccgtc gcgggtaagg
     5281 cgataacgca gctgcaaggt gctgccgggc ttgggttgga acgggagttc cagcgcggca
     5341 tcggggtaca ggctgtgcga gacgtcgtgg gcggtgcagg cgccggcact gccgcactcg
     5401 gccacgctgg tgatacccac gcgcagcgtg ccaatgttgt gcaggatgtt gccctgcagg
     5461 cgcagcgcca cctcgccatc agcgggcagc acgttcacca gggcacccca gaccaggctg
     5521 acgcccacgt tggcttgtga tccgccctcg ccttcacgct cgatttcttc cggcccacgc
     5581 acaccctcga aatagatgcg gtaggcggtt tccttctcca cgctctgcag cggaatcagg
     5641 cggatcaggc gattgccgcc gcccgaaagc gcgaacttgc ctggggtgat agtgatggcg
     5701 gcctcatgcg gctccacctc gacctcgcgc tcgttgtcac tggcgggatt gtcgatgcgc
     5761 cgcagcgcgg cctgcacgta ctgcggctgg gtggactgcg agtacacgcg gatctgcgcg
     5821 ctgcgcttgc cttcgatcga ggtgcgcatg ggatggatgg tcagattggc gtgggccgcc
     5881 agtgcaacca gcaggatcaa cggcagcaag gagaaaacaa tctttttcat gggaggttcc
     5941 gtagaggtga tcaggggcgg gccgtgggca cgcgcagctc gaccttcagt tcgccggcat
     6001 agacgccctg gcgcttgctg ctggaaggga attgcggcgt gagcagggtc aacggcgtgg
     6061 gcacgcagta caccggctgg tcgagcttgg gcagcttgac cagccgcagc gcggtgctgt
     6121 ccacgccatg cagttgctcc tccacaccgt tgcgcatgcg ccgcgtgttg ccggcgtagt
     6181 cgagcagcac gtcgaagtcc acgcgctcgc tctcgtcacc ggtggtgtcc ggatgccaga
     6241 ccgagaaacc atcaccgccg ggcgagcgtg agccggcgtc acgcacggtg acgcccaggt
     6301 actcgctact ggagccgacg ccgtcgtaca ggcacatgtc gacgtccttg cgtccgccga
     6361 tcatcctggc gatcgggtcg tagcgcagat ccagattgac gtgggcgttg ccgtactcga
     6421 aggccggcag gtagatcgaa accgcgtcgt aatcggtgac cgtgaaatcg aagttgaaga
     6481 cgtaagtggc gagatgctct gagggcgggc gacgcaggcg gagttcgaca actcccttcc
     6541 aatgcccagc ggtgagattc agtaagtcat cagccttgat cctcagcccc acgccagttc
     6601 cagccgcgac caccctgttg caccgctgtg ctaccgatga gtagatgccg tagcgcttgc
     6661 cgtgccagta gccgatttcg caggtaacgg aagcgtcagc ccgatagatg gctgctgtga
     6721 catccacatt ggttgctaag ccgcttcttt cttcagtgag cctagtagct acggaggtct
     6781 ctgcattcaa ttcaaccagc atgtcctcca ccggacaccg acccgtcgac gtatccgtcg
     6841 ccgatgcaca caccatgaac aactcgccat agcgcttgct cagatccgtg tcgtaagcca
     6901 gcagcgtgcg tggcgcccac aactcgatat cagctggaat cgaggatcga tcccaactca
     6961 tcactacatc ctgtgtgaac atcccgcgcg gcgggtccgt ctgcggcggc tgttgcgccc
     7021 acaccctcgg taccaccaca gccaacgcac ttaccaccat ccaagcaaac accacacgcc
     7081 gtttcatggc gtttctcctg tagcagcggt ctgcggtaaa accgcgatca aggcctgttc
     7141 ctgcagcaga cgggtcaccc gtgcctgctg gcggatctcc gccggcaact gcgccaccgc
     7201 aagcggctcg cactgcactg cgcccaccag cagcaccacg ctgcggcgtt cgcgcacctg
     7261 cagcgggcac tgcagcagtt ggtcgtcctg cagcagatag agggtctttt ccctgcgcgg
     7321 gaagtcggcc acgaagccgc cgttggcgct ggtgccggcg accggtgcgt tgagaatgcg
     7381 tgcgccgccc aatggcagtc cggcgacatc gcgcgcactg ccgacgaagg tgtaggtcac
     7441 ctcgatcggc accggcatgc gaaccagtcg gccgggcgac aggaacaacg ggcgcatgcc
     7501 ggatacgccg ctcacccgca ccgaggcaat gccatccacg gtgctcgcgt cctgcaggtc
     7561 ggcacggtgc gactggtaag cctgtagcgg catcagccgg cgctcgccca ggttcaggcg
     7621 ctggcggcgc gagcccccca cctgcagttc ggcagccacg ccacgcaggt cgaaatcgtc
     7681 ggtgtcgtcc acctgcacgg ccaggccggc atcggcggtg gctccgccgc cccagtagag
     7741 accgcgacgg ctcagcgcga agctggaggc atggttggcg ctgtaggaaa actcgctgcg
     7801 tcccggctgg cgataaccac cgacggtgat gccggtctgg ccccaggggt tctgcagctg
     7861 gccgcccacg gtcgcgctgt agcgctcatt gttggtagcg cgcagttcgg cattcgcttc
     7921 gcggtaggtg gcatccacct cctgccgcag gctctgcgcc acgctgtagg tcgcgtccgg
     7981 gcgctggtgt tcgggctggc gcgcatccac ggcgtagcgg cgctgcgagc tgccgcgctc
     8041 gccgttctgc aggcggctca gcgcgaagct gaggaacacg cccctgtcgc ggctggaggg
     8101 cgtgttggtg ttgccgtcgt tgtgctgctg ccatacgccg gcgcggctgg acacactgaa
     8161 ctcgccccag cggtcggtac ggctgtagct ggcctgccag gtgcggctgc gctgggcttc
     8221 gcgccgcggg cgcaacgggt ccggcggcag ccacggcagc aggccctcaa gaggatcctc
     8281 gtcaaagcca ggcaacgcct gtgccgggcg ccaggtctgg cggcgcgtat agcccacgta
     8341 ggcactgccg cccgccaacg gtagcgacat cgaaccactg agcgagtcgc tgcaacccag
     8401 gcggtcccgg ctgtcatcct ggaagcggca ggcattgccg cgcatgcgtt gctggtacag
     8461 attccacgac gcacgccggc ggtacgacag ttgatgctgc tggccgctgc tgccatcact
     8521 gccacgcagc acgctgaagg caccgcgcag atcctgggtc gcgaactggc ggcgcacgtc
     8581 cagccgcagt tcgccgtagc tgaaaccggc gatgtcggcc acgcctgcgg tcagcgccag
     8641 gtcgcgcgcc agaggaaagc ggacaccggc ctgcagcgcg tgctcgccgt caccgctgcg
     8701 gcttcggcgc tcgtcgcgct gcccgccctg cacgaaccac tgcaggcgcg tatcggtcca
     8761 gtcaccaccc ttgtcgaacg gggcatcctc gctgcgcacc agcacgccgt cttcgtagat
     8821 gcgcagggtg acgttgtagc tgcccatcgg gaaactgcgg gtgtccagct gattgacgcc
     8881 ggcctgcaga tagaaggtct gcagcagccg ctcgctctcg aaggcatcca cgcgcgcatc
     8941 gcgtgccagc agcacggtga gcggcgaggc ctgcatcgca ccgtcggcgt ccacgtaagc
     9001 gtaggtggtg ccggcacgca caccacggaa gcggtccagc ggcagcatgc cgaatgcaaa
     9061 ggtgccgccc tgggtgctgg acaggttgcg ccggtccatc aggccgacct gcaggtagtg
     9121 ctcctggccg aggtcgtggc ggtaatacgc gctgtccagc tggaagtcat cgcggctgcc
     9181 gctgcggcgg tagtgctggc ggttgtagtt ccactcaccc gccacatgtc cgcgcttgaa
     9241 caggcccagc gtgcccgcgc cctgcgcgct cagcgattga tagtcgcggc caccgctgat
     9301 gttgaaggtc tgccggtgca gccaggcgtt ctctgcgttg gcggtgacgt tgtggaagcg
     9361 atgcgcatcc ggtgtctgcc cggggatcca ctgctgggca atgaacaggc gcagtacgcc
     9421 ttcgccttcg tcatacagcg cgtgcacaga cgcgggatct tccggcggtg ccatgtagcc
     9481 gcagccggcc gcagcgccgc caaagcggca cgctaggtgg ctgttgcgcg gcatcggctg
     9541 cgacagcgcc ggcagcaacg cggcctgcgc ttctgcggaa aggcccagcg cctgcgccac
     9601 gcgctgcggc tccagtagct gcacctcgtc cagcgtcacc cgcaccggcg acagcccggc
     9661 cgattggccg aacaggctga cgtccagctg ctcggtctgg ccttccacca gatcttcaaa
     9721 gccagcgggg acgctgcggg cgtgggccag cgttggcgcc aacgccaggg cgagcgccat
     9781 cgccagccgg gtcacggcgg gtgcgggaga attcattcgg ggagatcgcg ttggaaggcc
     9841 ggcccgtgca tacgggccgg cgggggctgc ttacgggctg gtggccttct gggccatgac
     9901 gatgacggcc atgccgtcgt aatcgccagc gacgatttcg ccctgggtcg tctgctcaag
     9961 actcagcggc aacatgatcg aacggccctg gacggcgcca tcgaaaatgt cggttgcttt
    10021 cagatcctgc gcggccgtgg tcagcgtcat gccgttgagg atcacggtca tcggcaccgg
    10081 ccttgcaccc ggattgccca gagtgggccg cagttcgaga tcactgccca gcttcacttc
    10141 gatgtccttg ctttcatcgt tggagaaaat gcgggtgttt tccttccacg ggcgcaggcc
    10201 gatgccaggc agataatcca gctgcaccga gtccggcagc gcggacccgt cttccttctg
    10261 gaaggcgagc gtggcatcca cgttggcgta gacggtgatg tgcgcatcga tggcaaatgc
    10321 ggacgtggaa acggtagcca gcgctgcagc gagcgcggct ttcttgatga tgacgttcat
    10381 ggggcgtgtc tctctcggac aggaaacgtg aaagctcccc tcccctgaaa gaggagggaa
    10441 gcgccgcccg cggaggtgga tgcgggcgac ggagagaatg ttagaaatcc attgccccac
    10501 aaaccattca agcattccta aaacgctgaa cgttgttgat aattcttgaa gccgctcaag
    10561 gtttgggaat tactcaatat ctctcatgct gtttttgcaa catttctcat tgctctgcgc
    10621 aaacatcatg aaacgctcga tccagaatgg ctcaggccgc cttgcggcgg cccgaggatt
    10681 catgcgttac gcaatcatca gaagaagatc gcgtacagga tcagcagtgg gatcggaacg
    10741 cccagcagcc acagcagcaa catcttcata tccgttctcc tgaagcaata ggaattacag
    10801 gtcgcggcga cggccgcccc aggtggcgct gaggctggcg aagaacgcgc cgatcagcag
    10861 ggtgatgaac agccagagtg cggcgtacgc cgtcgccttg cgtgcatcgt cggcggcctg
    10921 cttggccgtg gtcttggcct tctccagcgc cgcacgcatg cgcgtctgca cgtcggtcac
    10981 gcgggcctgc gcttcggctt cactcatgcc ggtttcgcgg gcaatcagct gcgacaggta
    11041 ctgggtatcg gccgggtcaa ggccatcgcc ctgcaggctg ttgacgatga tgcggttcac
    11101 ttccgcacgc acctcgcggc gatcgccgcc ggggccaccc gccatcgggc gcggcggcgg
    11161 cgtcatgccg gccggacgcg gaccggcgtt cggtgccgcc ggcggcggcg gtgcggccgg
    11221 atcgttcatc gcacccggtg ccggcggcgt gcccggtgcc ggcggcgccc ctgcctccgg
    11281 tgcgcccgga gccgggcgag ccgcgctgcg gaacagcgaa tcgacccaat agttgaggtc
    11341 gccttcctgc gcattgcctg cagcggccgt gccggctgct gcggtgacca cgcctgccgt
    11401 cgacgcggct gcacccgccg tggcaccggc gaccttggcg cccgcaccca gcacgccacc
    11461 gatggccgag gtcagcaggc cggcggtaag cagcgtggcc accgcccacg acacgaaacc
    11521 atgcgcggtg tcgcggaagt aggtttcatc accgtggatc agcgtccact tggtacgcag
    11581 gcgaccggcc aggtagccac ccagtcccga ggcggccagc gcggtgaagg tgagccaggc
    11641 gatgctggac cagccgaagg tttccttgct gacaccttca aacgaccacg gcgacaccga
    11701 cgacaggccg aggccgacgc cgagaatcag caggatgagg gacagggcgg cggcagcgac
    11761 ggcgccagcg aagatcgcgc cccaggacac cgcactttcg ctggcgggcg gaacgatggg
    11821 ggcggtgacg acggtggcga cgtcggggcc gagcggtccg cgctcgggtg gatcaaatcg
    11881 ggtactcatc gggatggacg ctccgtttca agggctgcga atgcagctgg cgtcctgagg
    11941 ctgcgcgagc cgttgtgaag cggatgagac ccttgaatca cgcggtcttg gcgcggtggt
    12001 ggttcaacgc ccgtcgagcc cggtagatcc aggcgatgcg tggagggttt gggccgaatg
    12061 cgtgccaacc aaggttggca cccaccaaag cgcgggcgtc ggtagatcca cgccatgcgt
    12121 ggatggcttg cgcgggatgc gtgccaacca aggttggcac ctaccaacgc caggcaaaaa
    12181 aaacgccccg cggatgcggg gcgtcttcag cacaacctac tgcgggcgat cagccctggt
    12241 agtcgcgcac gtcgctgccg gtgtagacct ggcgcggacg gccgatcttc atttccggat
    12301 cgacctgctg ttccagccaa tgcgacaccc agccggaggt acggcccagg gcgaacatga
    12361 cggtgaacat ttcggtcggg atctgcagcg ccttgtagat gatgccgctg tagaaatcga
    12421 cgttcgggta cagcttgcgg gcgacgaagt attcgtcctg cagcgcggcc tgttccagct
    12481 tcacggccac gtccagcagc ggatcctgca cgcccagctg cttgagcacc ttgccggtca
    12541 tctcaccgat gaccttggcg cgcgggtcga agttcttgta gacgcggtgg ccgaagccca
    12601 tcaggcggaa gccggaggtc ttgtccttgg ccttgagcac ggcggactcg acgttgtcgg
    12661 cagtgccgat ttcttccagc atcttcagca cggcttcgtt ggcaccgccg tgagccggac
    12721 cccacagcgc ggtgacgccc gcagcgaccg acgcatacgg gttggcaccg gtcgaaccga
    12781 ccaggcgcac ggtcgaggtc gacgcgttct gctcgtggtc ggcatgcagg atgaacagca
    12841 ggtccagcgc cttgaccacg tcctggttca gctcgtactg gccgtcggcc gactcgaagg
    12901 tctgcttcag gaagcggctg acgtaatcca gcgaggtgtc cggcttgttg gccggcaggc
    12961 ccttgccgtg gcggtagatc agcgccgaca gggtcggcac cttggcgatc aggcgcacgg
    13021 cggcctggcg gcgctgttcg gcgtcggaca ggtccagcga ggcgtggtag atgcccgaca
    13081 gctgcgcgat ggcggcggtc aggatggcca tcgggtgggc atccttggcg aagctgccga
    13141 tcagggtgtt gatcgacgca tcgacattgg cttcggccgc cagctcgtcg gtgaaggcct
    13201 tcagctgctc ggcgctcggg cgctcgccgt tgatcagcag gcaggccact tcgacgtagc
    13261 tcgacttttc cgacagctgt tcgatcgggt agccgcgata cagcagcacg cccttgtcgc
    13321 cgtcgatgta ggtgatggcg gacttgcagc tggccgtcgc ggtgaagccg gaatcgtagg
    13381 tgaaataccc cgtttccttg gtcagcttcg cgatgtcgac gcagtcgttg ccaagggtgg
    13441 gtttgatgac gggcagaacg acggacttat cgccggcgtt gagcgtgacc tgatcaagat
    13501 cggacactgt gtgcgctcct tcatgggaag gcgcctgccc aagcgcattg gtcaggcacg
    13561 tgaatgacgt cctcggcctg tgccggggat cacgccatta tcgcacagca gcatttgccc
    13621 ggcgctagac agaagtcgta gacgacaggc ggccagaacc cggccattga gcggcccgga
    13681 tcggcaaaag cgttgtcaca cgaacgcagt gttccgtcca tccaaacgcc cgttgggcag
    13741 gcgttgggga aaaacaaacg gccgcgcaga gcgcggccgt cggttcgaag ctggatcgac
    13801 agatcagcgc gcgtagcgct tctggaactt gtcgatacgg cccgaggtgt cgatgacctt
    13861 gtgcttgccc gtgtagaacg ggtgcgaagc cgaggaaatt tcaaccttga ccagcgggta
    13921 ttcgttgccg tcttcccact ggatggtttc cttcgtcgcc atggtcgagc gggtcaggat
    13981 cttgaaatcg gaggtgacgt catggaagac gacgtcgcgg tagttcggat ggatatcggc
    14041 cttcatgggc tcacaccgta aatgggctgg tggtcaagag cggcattata agcaccggtt
    14101 gccgctcggg gcaaccggta ccgggacatc gacctcagtc cgcgcccagg gcctggcgta
    14161 ccagggcctc gaaacgctgc tggtcgtagg ccatcagcag atcgcagttg tccggctggc
    14221 cggtctggcg gttccagtcg acgatggtgg caccgcggct gaacgtgccg ttcagttcca
    14281 cgttcagcgg ccgcgactcg acctgcagct gcccttccgg gttcaacgcc caggccatgg
    14341 ccaccgcgtc ggcggtatac cagcggcccc ccttgctgtc ctcggacagg ccacgggtct
    14401 tgcgcgagat cagctcgtag aagcgggcgc gatcggaatc ggcctgcagc cacttctcgg
    14461 catcctgcag cggcaggcca tgggcgacgg tggcttccca gtccgatacc agcaggtgct
    14521 tgaacgaggt gaacaccaca tgcgccgctt ccggatcgaa ggcgatgttg aactcggcgg
    14581 ccggggtgat gttgccgtgg caggtgaccg cgccgcccat caccacgatg cgcttgatgc
    14641 gctggggcag ggtcgggtcc agcttcagcg ccagcgccag gttggtcagc gggccgagca
    14701 tcaccagcat cagttcgccg gcgtgttcgt gcgacaggcg caggatggcc agcgcggcat
    14761 gttcggcttc ggcctggcgg ctcggcggcg gcaggtccac atcgccgtaa ccgtcacggc
    14821 catgtacgtg ggcagcgtcg acggagggat gcagcagcgg atccgggctg ccggcaaaca
    14881 ccggcacgtc ggcgcggcca acgatgtcgc agagcttgag ggcgttgcgg acggtgtact
    14941 gcaggccgac attgccggcg gcgatggtca gggcgaccac gtcatgccgt tcatcggcaa
    15001 aggccatcag cagggccagg gcgtcgtcca caccggggtc ggtgtcgatc aacaggggga
    15061 tcttgtgggt catcgttgcc gtcttcagat cggcaacgaa gtgtggaccg ggatgatgac
    15121 cgttgcaagt acgggggttg gggt
//
LOCUS       DAOKIP010000091        15116 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.091,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000091 DAOKIP010000000
VERSION     DAOKIP010000091.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 15116)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15116)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15116
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.091"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            213..641
                     /gene="rplK"
                     /locus_tag="QEL58_002294"
     CDS             213..641
                     /gene="rplK"
                     /locus_tag="QEL58_002294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008374187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11"
                     /protein_id="HDS1676755.1"
                     /translation="MAKKVVGYIKLQVKAGQANPSPPVGPALGQRGLNIMEFCKAFNA
                     ATQKLEPGLPVPVIITAYSDRTFTFITKSTPATTLLKKAAGISSGSKRPNTEKVGKVT
                     RKQLEEIAKAKEPDLTAADLDAAVRTIAGSARSMGLVVEG"
     gene            646..1344
                     /gene="rplA"
                     /locus_tag="QEL58_002295"
     CDS             646..1344
                     /gene="rplA"
                     /locus_tag="QEL58_002295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010341341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L1"
                     /protein_id="HDS1676756.1"
                     /translation="MAQTKREKAIKAAVVPGKAYAFEDAINILKSATKAKFVESIDVA
                     VRLGVDAKKSDQQVRGSTVLPAGTGKSVRVAVFAPAGAKADEALAAGAEAVGMDDLAE
                     KMQAGDLNYDVVIATLDAMRVVGKLGTVLGPRGLMPNPKVGTVSPNPGEAVKNAKSGQ
                     VRYRTDKAGIIHCTIGKADFAEDALKSNLTALLLDLIKAKPATSKGTYLQKVSVSSTM
                     GPGVTVDQSSLTLK"
     gene            1729..2265
                     /gene="rplJ"
                     /locus_tag="QEL58_002296"
     CDS             1729..2265
                     /gene="rplJ"
                     /locus_tag="QEL58_002296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011036116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L10"
                     /protein_id="HDS1676757.1"
                     /translation="MALNLSQKQEVVAELADVAAKAHSLIAAEYAGTTVAQMTAMRKQ
                     ARETGVFLKVVKNTLASRAVEGTEFAVAQDQMVGPLLYAFSLEEPGAAGRLIKEAAKG
                     NDKLKAKVVAIGGEVFPASHVDVLASLPTRDQALAMLARVLTEPVTMFARAIKAVGEK
                     QGGGDVAADAAEPAAETA"
     gene            2329..2697
                     /gene="rplL"
                     /locus_tag="QEL58_002297"
     CDS             2329..2697
                     /gene="rplL"
                     /locus_tag="QEL58_002297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008574194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L7/L12"
                     /protein_id="HDS1676758.1"
                     /translation="MSLTNEQIVDAIAEKSLMEVMELVKAIEEKFGVSAAAPVAVAAA
                     AGPAAAVEEQTEFVVTLKSAGDKKVEVIKAVRAITGLGLKEAKDLAEAGGVLKDNASK
                     DEAEKMKKDLEAAGATVEVK"
     gene            3005..7159
                     /gene="rpoB"
                     /locus_tag="QEL58_002298"
     CDS             3005..7159
                     /gene="rpoB"
                     /locus_tag="QEL58_002298"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020852081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta"
                     /protein_id="HDS1676759.1"
                     /translation="MTSYSFTEKKRIRKDFGKQRSILEVPFLLAIQVDSYREFLQENV
                     DPAKRTDHGLHAALKSVFPIASYSGNAALEYVGYKLGEPVFDERECRQRGMSYGAPLR
                     VTVRLVIYDRESSTKAIKYVKEQEVYLGEIPLMTENGTFIVNGTERVIVSQLHRSPGV
                     FFDHDRGKTHSSGKLLYSARIIPYRGSWLDFEFDPKDALFTRIDRRRKLPVSILLRAL
                     GYSNEEMLAEFFEINTFHINPDEGVQLELVPERLRGETLGFDLADGDKVIVEAGKRIT
                     ARHIKQLEASGIAALAVPDDYIVGRILSHDVVDASTGELLAQANDEITDEQLQSFRKA
                     GVDAVGTLWVNDLDRGPYLSNTLRIDPTKTQLEALVEIYRMMRPGEPPTKDAAQNLFH
                     NLFFTFERYDLSAVGRMKFNRRVGRKETTGEAVLYDRKYYGERNDEESKRLVAAHGDS
                     SDILDVIKVLTEIRNGRGVVDDIDHLGNRRVRSVGEMAENVFRVGLVRVERAVKERLS
                     MAESEGLTPQELINAKPVAAAIKEFFGSSQLSQFMDQNNPLSEVTHKRRVSALGPGGL
                     TRERAGFEVRDVHPTHYGRVCTIETPEGPNIGLINSLAVYARTNQYGFLETPYRKVVD
                     GKVYDEVEFLSAIEENEYVIAQANALTNADSVLTEQFVPCRFQGESLLKPPAEVHFMD
                     VSPMQTVSIAAALVPFLEHDDANRALMGANMQRQAVPTLRAQKPLVGTGIERAVARDS
                     GVTVNARRGGEIVQIDAARIVVKVNEEEIVGATDAGVDIYNLVKYTRSNQNTCINQRP
                     LVQVGDVIARGDVLADGPSTDIGELALGQNMLIAFMPWNGYNFEDSILLSERVVEEDR
                     YTTIHIEELTCVARDTKLGPEEISADIPNVSEQALNRLDESGVVYIGAEVRAGDIMVG
                     KVTPKGESQLTPEEKLLRAIFGEKASDVKDSSLRVPPGMDGTVIDVQVFTRDGIEKDK
                     RARQIEESEIKRVKKDFDDQFRILEAAIYMRLRSQIVGKVVNGGAGLKKGDVISDAFL
                     DGLKKADWFALRMKDEDASEAIERAQKQIQAHEKEFERRFADKRGKITAGDDLAPGVL
                     KMVKVFLAVKRRIQPGDKMAGRHGNKGVVSNVVPVEDMPYMASGETVDIVLNPLGVPS
                     RMNIGQILEVHLGWAAKGLGRKIQAMMEAQAAVADLRKFLDDIYNHDDTNVANRVDLS
                     QFSDEELLRLARNLTDGVPMATPVFDGATEAEIKRMLELADLPSSGQTQLYDGRTGEA
                     FDRHTTVGYMHYLKLNHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWAL
                     EAYGAAYTLQEMLTVKSDDVQGRNQMYKNIVDGEHEMVAGMPESFNVLVKEIRSLAIN
                     MELEDN"
     gene            7247..11470
                     /gene="rpoC"
                     /locus_tag="QEL58_002299"
     CDS             7247..11470
                     /gene="rpoC"
                     /locus_tag="QEL58_002299"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004145274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
                     /protein_id="HDS1676760.1"
                     /translation="MKDLLNLFNQQRQTLDFDAIKIALASPDLIRSWSFGEVKKPETI
                     NYRTFKPERDGLFCAAIFGPVKDYECLCGKYKRMKHRGVVCEKCGTEVTLAKVRRERM
                     GHIDLASPVAHIWFLKSLPSRIGLMLDMTLRDIERVLYFEAYVVTEPGLTALERRQLL
                     TEEQYLQARQEHGDDFDAAMGAEAVYELLRTIDLQSEMTRLREEIAATGSETKLKRLT
                     KRIKLIEAFLESGNRPEWMVMTVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRN
                     NRLRRLLELSAPDIIVRNEKRMLQESVDALLDNGRRGRAITGTNKRPLKSLADMIKGK
                     QGRFRQNLLGKRVDYSGRSVIVVGPYLRLHQCGLPKKMALELFKPFVFAKLQRRGLAT
                     TIKAAKKLVEREEAEVWDILEEVIREHPVMLNRAPTLHRLGIQAFEPVLIEGKAIQLH
                     PLVCTAFNADFDGDQMAVHVPLSLEAQLEARALMMSTNNILSPANGEPIIVPSQDVVL
                     GLYYMTRSLENKKGEGMAFANIAEVKRAYDNRVVELHARVKVRITEVVTDEDGVKQNK
                     TSIVDTTIGRALLAEILPEGLPFALANTELTKKNISRLINSSYRQLGLKDTVVFADKL
                     MYTGFAYATRAGVSIGIDDMLIPDEKKGILTEAEAEVLEIQEQYQSGLVTAGERYNKV
                     VDIWSRTNERIAKAMMDTIGTEKVVNAKGETIDQKSMNSLYIMADSGARGSQAQIRQL
                     AGMRGLMARPDGSIIETPIKANFREGLNVQEYFNSTHGARKGLADTALKTANSGYLTR
                     RLVDVAQDVVITEVDCGTTEGLIMTPIVEGGDVVEPLKDRVLGRVVAEDVFLPGNDED
                     PIVTRNTLLDEAWVAKLEDAGVQSIKVRSTISCESAFGVCGRCYGRDLARGHLVNIGE
                     AVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAVDNITVKTTGSVKFSNLKSVEHANG
                     SLVAVSRSGEISVLDAHGRERERYKLPYGATITSKDGDAIKAGQTVANWDPHNHPIVS
                     EVAGFIRFIDFVDGITVIEKTDELTGLASREITDPKRRGTQAKDLRPIVRIVDAKGND
                     LSIPGTDLPAQYLLPPRSIVNLQDGAPVGVGDVVAKIPQEASKTRDITGGLPRVADLF
                     EARKPKDPAVLAERSGIISFGKDTKGKQRLIIKDTDGSEHEELIPKYRQVIVFEGEHV
                     TKGETIVDGEPSPQDILRLLGVEPLAAYLVKEIQDVYRLQGVKINDKHIEVITRQMLR
                     KVEITDQGSSKFLNGEQVERQRVIEENARLSTRNELPAHFDPVLLGITKASLATESFI
                     SAASFQETTRVLTEAAVRGTSDNLRGLKENVIVGRLIPAGTGLAYHSNRRRGASGLTE
                     SEMQTLAGTPAAVEAPVVEAEAEQASGEE"
     gene            11755..12129
                     /gene="rpsL"
                     /locus_tag="QEL58_002300"
     CDS             11755..12129
                     /gene="rpsL"
                     /locus_tag="QEL58_002300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003469157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12"
                     /protein_id="HDS1676761.1"
                     /translation="MATINQLVRKPRQATTYKSASPALDKCPQRRGVCTRVYTTTPKK
                     PNSALRKVAKVRLTNQEEVISYIGGEGHNLQEHSVVLIRGGRVKDLPGVRYHTVRGSL
                     DAAGVAKRRQARSKYGAKRPKA"
     gene            12142..12615
                     /gene="rpsG"
                     /locus_tag="QEL58_002301"
     CDS             12142..12615
                     /gene="rpsG"
                     /locus_tag="QEL58_002301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006450629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S7"
                     /protein_id="HDS1676762.1"
                     /translation="MSRKGNTPQRSVLPDPKHGSETIARFINMVMQSGKKSVAEKIVY
                     GAMDVITEKNSSANAIELVQKALDNVAPAVEVKSRRVGGATYQVPVEVRSSRKMALAM
                     RWLIDSARKRGENTMPKKLAAELIDASENRGGAIKKREETHRMAEANKAFAHYRW"
     gene            12757..14898
                     /gene="fusA"
                     /locus_tag="QEL58_002302"
     CDS             12757..14898
                     /gene="fusA"
                     /locus_tag="QEL58_002302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017156211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HDS1676763.1"
                     /translation="MARSTPIERYRNFGIMAHIDAGKTTTSERILFYTGKSHKIGEVH
                     DGAATMDWMEQEQERGITIQSAATTAFWKGMDKSLPEHRFNIIDTPGHVDFTIEVERS
                     LRVLDGAVFVLCAVGGVQPQSETVWRQANRYKVPRIAFVNKMDRTGANFYKVRDQLKA
                     KLGAVAVPMQLPIGAEDGFKGVVDLLKMKAIHWDEASQGMKFEYGEIPADLQEKAEEA
                     RTYMIETAAEASEELMEKYLGGEELAEAEIINALRTRTLATEIVPMYCGSAFKNKGVQ
                     AMLDGVIQLLPSPVDVPDVTGTDVDDENVAMTRKSDDKAPFSSLAFKIITDPFVGALT
                     FFRVYSGTLNGGDTVLNSVKGKKERIGRILQMHSNNREEIKEVLAGDIAAAVGLKDTT
                     TGDTLCSIDQPIILERMTFPEPVISMAVEPKTKSDQEKMGLALGRLAQEDPSFRVKTD
                     EESGQTIISGMGELHLDIIVDRLKREFNVEANVGAPQVAYRETITLADVKSDYKHAKQ
                     SGGKGQYGHVVIELSPITAEDRADAKIAPLIKDDFLFINDITGGVIPKEFIPSVEKGL
                     RETITSGPLAGFPVVDVKVKLVFGSYHDVDSSEMAFKLASSMAFKQGFAKAKPVLLEP
                     IMKVEIVTPEDYQGDVMGDVSRRRGVLQGSDTTGDGSASIINAMIPLGEMFGYATALR
                     SQTQGRATFTMEFDHYEPAPNNIAEAVMKKG"
     gene            14950..>15116
                     /gene="tuf"
                     /locus_tag="QEL58_002303"
     CDS             14950..>15116
                     /gene="tuf"
                     /locus_tag="QEL58_002303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003486726.1"
                     /note="EF-Tu; promotes GTP-dependent binding of
                     aminoacyl-tRNA to the A-site of ribosomes during protein
                     biosynthesis; when the tRNA anticodon matches the mRNA
                     codon, GTP hydrolysis results; the inactive EF-Tu-GDP
                     leaves the ribosome and release of GDP is promoted by
                     elongation factor Ts; many prokaryotes have two copies of
                     the gene encoding EF-Tu; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HDS1676764.1"
                     /translation="MAKGKFERTKPHVNVGTIGHVDHGKTTLTAALTKIGAERFGGEF
                     KDYSSIDAAPE"
BASE COUNT         3086 a         4854 c         4739 g         2437 t
ORIGIN      
        1 ggcttggccc ggtttcttcc gtttacgtgc cgcttcaggc atgtgaagaa aaaacctgat
       61 atagtgcgcg gctccccgct gggaagccag caggacgagg ccaccgcaag gtggccttcg
      121 gcatgatttc aaaacgcgat gccgggacgc gtgattcccg gtccgatggg gagcctgttg
      181 tcgaaaggcg ctagcacccg gagagcactc acatggcaaa gaaagttgtc ggttacatca
      241 agctgcaggt gaaggccggt caggccaacc cctcgccgcc ggtcggtcct gcgctgggtc
      301 agcgtggtct gaacatcatg gaattctgca aggcgttcaa cgctgccacg cagaagctcg
      361 agccgggtct gccggttccg gtgatcatca cggcctactc ggaccgtacg ttcaccttca
      421 tcaccaagag caccccggct accaccctgc tgaagaaggc cgctggcatc tcgtcgggct
      481 ccaagcgccc gaacaccgag aaggtcggca aggtcacccg taagcagctg gaagagatcg
      541 ccaaggcgaa ggaaccggat ctgactgccg ccgacctgga cgccgccgtg cgtaccatcg
      601 ctggctctgc ccgttccatg ggcctcgtgg tggagggtta ataagatggc acagaccaag
      661 cgtgagaagg ccatcaaggc cgccgtcgtt ccgggcaagg catacgcctt cgaggacgcg
      721 atcaacatcc tgaagagcgc caccaaggcc aagttcgtcg agtcgatcga cgttgccgtg
      781 cgcctgggcg tcgatgcgaa gaagtccgac cagcaggtcc gtggctccac cgtgctgccg
      841 gccggtaccg gcaagtcggt ccgcgtcgcc gtgttcgctc cggccggtgc caaggctgac
      901 gaagccctgg ccgctggcgc cgaagccgtc ggcatggatg acctggccga gaagatgcag
      961 gccggcgatc tgaactacga cgtcgtcatc gcgaccctgg acgccatgcg cgtcgtcggt
     1021 aagctcggca ccgtgctggg cccgcgcggc ctgatgccga acccgaaggt cggcaccgtt
     1081 tccccgaacc cgggtgaagc cgtgaagaac gccaagtcgg gtcaggtccg ttaccgcacc
     1141 gacaaggccg gcatcatcca ctgcaccatc ggcaaggccg acttcgccga agacgcgctg
     1201 aagtcgaacc tgaccgcgct gctgctggac ctgatcaagg ccaagccggc tacctcgaag
     1261 ggcacctacc tgcagaaggt ttcggtcagc tcgacgatgg gcccgggcgt caccgtcgac
     1321 cagtcgtcgc tgaccctgaa gtaattgttt gaagcggtca cggtgccctg ggtgccgtga
     1381 ccgtgacatt tgaaggcatc gctggcagtg catcgcccgc ggtagccgtc aaagaccgca
     1441 ggcgcggtcg tggcaatacc ggcgacgggc acggaagctc gatctggcaa ggagtcgccg
     1501 ccggagcagt catgagcgct taatcgattc cccggaatca ccctgcgtag atggtgccct
     1561 tctggagttt ttctggttca cgcatgtctg ggatttccct gattgcctcc aggtctggaa
     1621 cggcccaccc cccggaacat catcccgatg ttcccggcgt ccaggacgga tgccgcacag
     1681 gaccgcacac ggcaggagcc gtaagcggag ttcaatagga ggagtgcaat ggctctcaat
     1741 ctgtcccaga agcaagaagt agtcgccgag ctggcagacg tcgccgccaa ggcccactcc
     1801 ttgatcgcag ccgaatacgc tggcaccacg gtcgcccaga tgaccgcgat gcgcaagcag
     1861 gctcgtgaaa ccggtgtttt cttgaaggtt gtcaagaaca ccctggcttc gcgcgccgtt
     1921 gaaggcaccg agttcgcagt cgcccaggac cagatggttg gtccgctgct gtacgcgttc
     1981 tcgctcgagg agcccggcgc tgccggtcgc ctgatcaagg aagccgccaa gggcaacgac
     2041 aagctgaagg ctaaggtcgt cgccatcggt ggcgaagtgt tcccggcaag ccacgtcgac
     2101 gtgctggcct cgttgccgac ccgcgatcag gccctggcca tgctggcccg cgtcctgacc
     2161 gagccggtca cgatgtttgc ccgcgccatc aaggccgttg gcgagaagca gggtggtggc
     2221 gatgtcgccg ccgacgctgc cgagccggcc gccgagaccg cctgagtttc gacttaccgt
     2281 ggttcctgac ggaacctcaa cccagaaaat catccaaagg tattaatcat gtcccttacc
     2341 aacgaacaga tcgtcgacgc catcgccgag aagtccctga tggaagtgat ggagctggtc
     2401 aaggccatcg aagaaaagtt cggcgtctcc gccgccgctc cggttgccgt ggctgctgcc
     2461 gctggcccgg ccgctgctgt tgaagagcag accgagttcg tcgtcaccct gaagtcggcc
     2521 ggcgacaaga aggtcgaagt catcaaggcc gtccgcgcca tcaccggcct gggcctgaag
     2581 gaagcgaagg acctggccga agccggcggc gtcctgaagg acaacgcttc gaaggacgaa
     2641 gccgagaaga tgaagaagga cctggaagct gctggcgcga ctgtcgaagt caagtaagca
     2701 cttcctttgc atcgtcatcg attcacggcg atgcagccaa ggctgggggc gtaagccccc
     2761 ggcctttggt cgtttcatgc aatacaggtt gtaactgcgg caaaaagccc aacacgggct
     2821 gcggtcagac cccggcaggc cagcgcacgg cgcggcagcg gggagtggta gcagacgagt
     2881 tggcagttgg aagtagcggg agaaggcgtg ctggtgccgg caataccagc gacttccaac
     2941 tgacaatttc aagttccctt cagggtcgtg gacgcacggc ccgcacaaca aggtggaaga
     3001 cctcatgacg tcctattcgt tcaccgaaaa aaagcgtatc cgcaaggatt tcggcaagca
     3061 gcgctcgatc ctcgaagtgc cgttcctgct cgccatccag gtggattcct atcgtgaatt
     3121 cctgcaggaa aacgtcgatc cggccaagcg cacggaccac ggcctgcacg ctgcgctgaa
     3181 gtcggtcttc ccgatcgcca gctacagcgg caatgccgcc ctggaatacg tcggctacaa
     3241 gctgggcgaa ccggtgttcg acgagcgcga gtgccgccag cgtggcatga gctacggcgc
     3301 cccgctgcgc gtgaccgtgc gcctggtgat ctacgaccgt gagtcgtcga ccaaggccat
     3361 caagtacgtg aaggagcagg aggtctatct gggcgaaatc ccgctgatga ccgagaacgg
     3421 caccttcatc gtcaacggca ccgagcgcgt catcgtctcg cagctgcacc gctcgccggg
     3481 cgtgttcttc gaccacgacc gtggcaagac ccacagctcg ggcaagctgc tgtacagcgc
     3541 ccgcatcatt ccttaccgcg gttcctggct ggacttcgag ttcgacccga aggacgcgct
     3601 gttcacccgt atcgaccgcc gccgcaagct gccggtgtcg atcctgctgc gcgcgcttgg
     3661 ctacagcaac gaagagatgc tggccgagtt cttcgagatc aacaccttcc acatcaaccc
     3721 ggatgaaggc gtccagctgg agctggtgcc cgagcgcctg cgtggcgaaa ccctgggctt
     3781 cgacctcgcc gacggcgaca aggtcatcgt ggaagccggc aagcgcatca ccgcgcgcca
     3841 catcaagcag ctggaagcct cgggcatcgc tgccctggcc gtgccggacg actacatcgt
     3901 cggccgcatc ctgtcgcacg acgtggtcga tgcctcgacc ggcgaactgc tggcccaggc
     3961 caacgacgaa atcaccgacg agcagctgca gagcttccgc aaggccggtg tcgatgccgt
     4021 gggcaccctg tgggtgaacg acctggatcg tggcccgtac ctgtccaaca ccctgcgcat
     4081 cgacccgacc aagacccagc tggaagccct ggtcgagatc taccgcatga tgcgtccggg
     4141 cgagccgccg accaaggatg ccgcgcagaa cctgttccac aacctgttct tcaccttcga
     4201 gcgctacgac ctgtccgcgg tcggccgcat gaagttcaac cgtcgcgtgg gccgcaagga
     4261 aaccaccggc gaagccgtgc tgtacgaccg caagtactac ggcgagcgca acgacgaaga
     4321 gtccaagcgc ctggtcgccg cccacggcga cagctccgac atcctggacg tgatcaaggt
     4381 cctgaccgag atccgcaacg gtcgcggcgt ggtcgatgac atcgaccacc tgggcaaccg
     4441 tcgcgtgcgt tcggtcggcg aaatggccga gaacgtgttc cgcgtgggcc tggtccgcgt
     4501 cgagcgcgcg gtcaaggagc gcctgtcgat ggccgagtcc gaaggcctga ccccgcagga
     4561 actgatcaac gccaagccgg tcgccgctgc catcaaggag ttcttcggct cctcgcagct
     4621 gtcgcagttc atggaccaga acaacccgct gtcggaagtc acgcacaagc gtcgcgtctc
     4681 ggccctgggc ccgggcggcc tgacccgtga gcgcgccggc ttcgaagtgc gcgacgtgca
     4741 cccgacccat tacggccgcg tctgcaccat cgaaacgccg gaaggcccga acatcggcct
     4801 gatcaactcg ctggccgtgt acgcccgcac caaccagtac ggtttcctcg agaccccgta
     4861 ccgcaaggtc gtggacggca aggtctacga cgaagtcgag ttcctgtcgg ccatcgaaga
     4921 aaacgagtac gtcattgcgc aggccaacgc gctgaccaat gccgacagcg tgctgaccga
     4981 gcagttcgtt ccgtgccgct tccagggcga atcgctgctg aagccgccgg cggaagtcca
     5041 cttcatggac gtctcgccga tgcagaccgt gtcgatcgcg gccgcgctgg ttccgttcct
     5101 ggagcacgat gacgcgaacc gtgcactgat gggcgccaac atgcagcgtc aggccgtgcc
     5161 gaccctgcgt gcgcagaagc cgctggtcgg taccggcatc gagcgcgccg tggcgcgtga
     5221 ctccggtgtg accgtgaacg cccgccgtgg tggcgagatc gtgcagatcg acgcagcccg
     5281 catcgtggtc aaggtcaacg aggaagagat cgttggcgcc accgatgcag gcgtggacat
     5341 ctacaacctg gtgaagtaca cccgttcgaa ccagaacacc tgcatcaacc agcgtccgct
     5401 ggtccaggtg ggcgacgtca tcgcccgcgg cgacgtgctg gccgacggtc cgtccaccga
     5461 catcggcgaa ctggccctgg gccagaacat gctgatcgcg ttcatgccgt ggaacggcta
     5521 caacttcgaa gactccatcc tgctctccga gcgcgtggtg gaagaggatc gctacaccac
     5581 gatccacatc gaagagctga cctgtgttgc gcgtgatacc aagctggggc cggaggaaat
     5641 ctccgccgac atcccgaacg tctccgagca ggcgctgaac cgcctggacg agagcggcgt
     5701 ggtgtacatc ggtgccgaag tccgcgccgg cgacatcatg gtcggcaagg tcaccccgaa
     5761 gggcgaaagc cagctgaccc cggaagagaa gctgctgcgc gcgatcttcg gcgagaaggc
     5821 ttcggacgtt aaggacagct cgctgcgcgt tccgccgggc atggacggca ccgtcatcga
     5881 cgtgcaggtc ttcacccgcg acggcatcga gaaggacaag cgcgcccgcc agatcgaaga
     5941 gtctgaaatc aagcgcgtca agaaggactt cgacgaccag ttccgcatcc tggaagccgc
     6001 catctacatg cgtctgcgtt cgcagatcgt gggcaaggtg gtcaacggcg gtgctggcct
     6061 gaagaagggc gacgtcatca gcgacgcgtt cctggacggc ctgaagaagg ctgactggtt
     6121 cgcgctgcgc atgaaggacg aggacgcctc ggaagccatc gaacgcgcgc agaagcagat
     6181 ccaggcgcac gagaaggaat tcgagcgtcg cttcgccgac aagcgcggca agatcactgc
     6241 cggtgacgac ctcgctccgg gcgtgctgaa gatggtcaag gtgttcctgg ccgtgaagcg
     6301 ccgcatccag ccgggcgaca agatggcagg ccgccacggc aacaagggtg tggtctccaa
     6361 cgtggtgccg gtcgaggaca tgccgtacat ggcctcgggc gaaaccgtgg acatcgtgct
     6421 gaacccgctg ggcgtgccgt cgcgtatgaa catcggccag atcctggaag tgcacctggg
     6481 ctgggccgcc aaggggctgg gccgcaagat ccaggcgatg atggaagccc aggcggccgt
     6541 tgccgacctg cgcaagttcc tggacgacat ctacaaccac gacgacacca acgtggccaa
     6601 ccgtgtcgac ctgtcgcagt tcagcgacga ggaactgctg cgcctggccc gcaacctgac
     6661 cgacggcgtg ccgatggcca ccccggtctt cgacggcgcc accgaagcgg aaatcaagcg
     6721 catgctggaa ctggccgacc tgccgagcag tggccagacc cagctgtacg acggccgcac
     6781 cggtgaagcc ttcgatcgcc acaccaccgt cggttacatg cactacctga agctgaacca
     6841 cctggtcgac gacaagatgc acgcccgttc gaccggtccg tactcgctcg tcacccagca
     6901 gccgctgggc ggcaaggcgc agttcggcgg ccagcgcttc ggtgaaatgg aagtctgggc
     6961 gctggaagcc tacggcgcgg cctacaccct gcaggaaatg ctgacggtga agtccgatga
     7021 cgtgcagggc cgcaaccaga tgtacaagaa catcgtcgac ggtgagcacg agatggtcgc
     7081 gggcatgccg gaatccttca acgtgctcgt gaaggaaatc cgctcgctgg ccatcaacat
     7141 ggaactggaa gacaactgat ccatgccggc gcggcggtca gccgccgcgc cgctggcagt
     7201 caactgaaag cccatcgaca cagcattcct ccttctggag aacaccatga aagacctgct
     7261 caacctcttc aaccagcagc gccagacgct ggacttcgac gcgatcaaga tcgcgctggc
     7321 ctcgccggac ctgatccgtt cgtggtcctt cggcgaagtg aagaagccgg aaaccatcaa
     7381 ctaccgtacc ttcaagccgg aacgtgacgg cctgttctgc gccgccatct tcggcccggt
     7441 gaaggactac gagtgcctgt gcggcaagta caagcgcatg aagcaccgcg gcgtggtctg
     7501 cgagaagtgc ggcaccgaag tgaccctggc caaggtgcgc cgcgagcgca tgggccacat
     7561 cgacctggcc tcgccggtcg cgcacatctg gttcctgaag tcgctgccgt cgcgcatcgg
     7621 cctgatgctg gacatgaccc tgcgcgacat cgagcgcgtg ctgtacttcg aagcgtacgt
     7681 ggtgaccgag ccgggcctga ccgccctgga gcgccgccag ctgctgaccg aagagcagta
     7741 cctgcaggcc cgccaggagc acggtgacga cttcgacgcc gcgatgggcg ccgaggccgt
     7801 gtacgaactg ctgcgcacga tcgacctgca gtcggaaatg acccgcctgc gcgaagaaat
     7861 cgccgccacc ggttcggaaa ccaagctcaa gcgactgacc aagcgcatca agctgatcga
     7921 agccttcctg gaatcgggca accgtccgga atggatggtc atgaccgtgc tgccggtgct
     7981 gccgccggac ctgcgtccgc tggttccgct ggacggcggc cgcttcgcga cctccgacct
     8041 gaacgacctg taccgccgcg tcatcaaccg taacaaccgc ctgcgccgcc tgctcgaact
     8101 gagcgcgccg gacatcatcg tgcgcaatga aaagcgcatg ctgcaggaat cggtcgatgc
     8161 gctgctggac aacggccgtc gcggccgtgc catcaccggc accaacaagc gcccgctgaa
     8221 gtcgctggcc gacatgatca agggcaagca gggccgcttc cgccagaacc tgctcggcaa
     8281 gcgcgtcgac tactcgggcc gttcggtcat cgtggtcggt ccgtacctgc gcctgcacca
     8341 gtgcggcctg ccgaagaaga tggcgctgga gctgttcaag ccgttcgtgt tcgccaagct
     8401 gcagcgtcgt ggcctggcca ccaccatcaa ggccgccaag aagctggtcg agcgcgaaga
     8461 agccgaagtc tgggacatcc tggaagaggt catccgcgag catccggtga tgctgaaccg
     8521 tgcgccgacc ctgcaccgcc ttggcatcca ggcgttcgag ccggtgctga tcgaaggcaa
     8581 ggccatccag ctgcacccgc tggtctgcac cgcgttcaac gccgacttcg acggtgacca
     8641 gatggccgtc cacgtgccgc tctcgctgga agcccagctg gaagcgcgtg cgctgatgat
     8701 gtcgaccaac aacatcctgt cgccggccaa cggcgagccg atcatcgtgc cgtcgcagga
     8761 cgtcgtgctg ggtctgtact acatgacccg ctcgctggaa aacaagaagg gcgagggcat
     8821 ggccttcgcc aacatcgccg aagtcaagcg tgcctacgac aaccgcgtgg tggaactgca
     8881 cgcgcgcgtc aaggtccgca tcaccgaggt ggtgaccgac gaagacggcg tgaagcagaa
     8941 caagacctcg atcgtggaca ccacgatcgg tcgcgccctg ctggctgaaa tcctgccgga
     9001 aggcctgccg ttcgcgctgg ccaacaccga gctgaccaag aagaacatca gccgcctgat
     9061 caactccagc taccgccagc tgggtctgaa ggacacggtc gtgttcgccg acaagctgat
     9121 gtacaccggc ttcgcctacg cgacccgcgc cggcgtgtcg atcggcatcg acgacatgct
     9181 gatcccggac gagaagaagg gcatcctcac cgaggccgaa gccgaagtgc tggaaatcca
     9241 ggagcagtac cagtcgggcc tggtcaccgc cggcgagcgc tacaacaagg tggtcgacat
     9301 ctggtcgcgc accaacgagc gcatcgccaa ggcgatgatg gacaccatcg gtaccgagaa
     9361 ggtggtcaat gccaagggcg agaccatcga ccagaagtcg atgaactcgc tgtacatcat
     9421 ggccgactcc ggtgcgcgtg gttcgcaggc gcagatccgt cagctggccg gcatgcgtgg
     9481 cctgatggcc cgcccggacg gctcgatcat cgagacgccc atcaaggcga acttccgcga
     9541 aggcctgaac gtgcaggagt acttcaactc cacccacggt gcccgtaagg gtctggccga
     9601 taccgcgctg aagaccgcga actcgggtta cctgacccgt cgtctggtcg acgtcgcgca
     9661 ggacgtggtg atcaccgagg tggattgcgg taccaccgaa ggcctgatca tgaccccgat
     9721 cgtggaaggc ggcgacgtgg tcgagccgct gaaggatcgc gtgctgggtc gcgtggtggc
     9781 cgaggacgtg ttcctgccgg gcaacgacga agatccgatc gtcacccgca acaccctgct
     9841 ggacgaagcc tgggtcgcca agctggaaga cgccggcgtg cagagcatca aggtgcgttc
     9901 gacgatctcg tgcgaatcgg ccttcggtgt ctgcggtcgc tgctacggcc gcgatctggc
     9961 ccgcggccac ctggtcaaca tcggtgaagc ggtcggcgtc atcgccgcgc agtcgatcgg
    10021 tgagccgggt acccagctga ccatgcgtac gttccacatc ggtggtgcgg cgtcgcgagc
    10081 tgctgcggtc gacaacatca ccgtcaagac caccggctcg gtcaagttca gcaacctcaa
    10141 gtcggtcgag cacgccaacg gctcgctggt ggcggtgtcg cgctcgggtg aaatctcggt
    10201 gctcgatgcc cacggccgtg agcgtgagcg ttacaagctg ccgtacggtg cgaccatcac
    10261 gtccaaggac ggtgatgcga tcaaggctgg ccagaccgtg gccaactggg atccgcataa
    10321 ccacccgatc gtgtcggaag tggccggctt catccgcttc atcgacttcg tcgacggcat
    10381 caccgtcatc gagaagaccg acgagctgac cggcctcgct tcgcgcgaaa tcaccgatcc
    10441 gaagcgtcgt ggtacccagg ccaaggacct gcgcccgatc gtgcgcatcg ttgacgccaa
    10501 gggcaacgac ctgtcgatcc cgggcaccga cctgccggcg cagtacctgc tgccgccgcg
    10561 ttcgatcgtc aacctgcagg atggcgcccc ggtgggcgtg ggcgacgtcg tcgccaagat
    10621 cccgcaggaa gcgtcgaaga cccgcgacat caccggtggt ctgccgcgcg tggccgacct
    10681 gttcgaagcg cgcaagccga aggatccggc ggtgctggcc gagcgttcgg gcatcatcag
    10741 cttcggcaag gacaccaagg gcaagcagcg cctgatcatc aaggacaccg atggttcgga
    10801 gcacgaagag ctgatcccga agtaccgcca ggtcatcgtg ttcgaaggcg agcatgtcac
    10861 caagggtgaa accatcgtgg acggcgagcc gagcccgcag gacatcctgc gtctgctggg
    10921 tgtcgaaccg ctggcggcct acctggtgaa ggaaatccag gacgtgtacc gcctgcaggg
    10981 cgtgaagatc aacgacaagc acatcgaggt gatcacccgc cagatgctgc gcaaggtcga
    11041 gatcaccgac cagggcagca gcaagttcct gaacggcgag caggtggagc gccagcgcgt
    11101 tatcgaggag aatgcgcgcc tgtcgacccg caacgagctg ccggcgcact tcgatccggt
    11161 cctgctgggt atcaccaagg catcgctggc gaccgagtcg ttcatctcgg ccgcgtcgtt
    11221 ccaggaaacc acccgcgtgc tgaccgaagc ggccgtccgc ggcacctcgg acaacctgcg
    11281 tggcctgaag gaaaacgtca tcgtcggtcg cctgattccg gccggtaccg gcctggcgta
    11341 ccacagcaac cgccgccgcg gcgcttccgg tctcaccgag tcggaaatgc agaccctggc
    11401 cggtaccccg gccgcggtcg aggcgccggt ggttgaagcc gaagctgaac aggcatcggg
    11461 cgaagaatga ggtatccggt ccggccacaa ggccggacca ccccatcggt ccatcgatgg
    11521 gattgggaaa gggcagggga gatcgtccgc ggtcgaccct gtcaacctga acggggtaca
    11581 tggaggcccc ccagtaacgt tccgggatca ggaacgggct tgacaggagg cgtttgactg
    11641 ctttcctggc aggttgctac aatcgtctgt ctcagcaggc caaaatttcg gcctgcttta
    11701 acatttccgc atctctggtc ggattttccg gccaccaatc agaagaacct actgatggcg
    11761 acgatcaacc agctggtccg caagccgcgg caagcgacca cctacaagag tgcctcgccg
    11821 gcgctcgaca agtgcccgca gcgccgtggc gtctgcaccc gtgtctacac caccactccg
    11881 aagaagccga actcggctct gcgcaaggtt gccaaggtcc gcctgaccaa ccaggaagaa
    11941 gtgatttcct acatcggtgg tgaaggccac aacctgcagg agcactccgt ggtcctgatc
    12001 cgcggcggtc gcgtcaagga cctgccgggt gtgcgttacc acaccgttcg tggctcgctc
    12061 gacgccgccg gcgttgccaa gcgtcgccag gcccgttcca agtacggcgc caagcgtccg
    12121 aaggcataag gagagagcac tatgtcgcgt aagggtaata ctccgcagcg ttccgtcctg
    12181 cccgatccga agcacggaag cgaaaccatc gcccgcttca tcaacatggt catgcagagc
    12241 ggcaagaagt ccgtcgccga aaagatcgtg tacggcgcca tggacgtgat caccgagaag
    12301 aacagcagcg ccaacgccat tgaactggtg cagaaggctc tggacaacgt cgctccggcg
    12361 gtcgaagtca agtcgcgccg cgtcggtggt gccacctacc aggtgccggt cgaagtgcgt
    12421 tcgtcgcgca agatggccct ggccatgcgc tggctgatcg actccgcgcg caagcgtggt
    12481 gagaacacca tgccgaagaa gctggctgct gaactgatcg acgcctcgga aaaccgtggc
    12541 ggcgccatca agaagcgcga agaaacccac cgcatggccg aagccaacaa ggcattcgcc
    12601 cactaccgct ggtgagtttg acggccttgt aaaacaggca gggcagcacc acttcggtgc
    12661 gtgctgcctc gcggtcccgg aaggactgcg ccaatccgaa ggccgccgaa aggcggcgtt
    12721 cggccatccg aaatccaaga aatctgagag gctcccgtgg cccgttccac tcccatcgag
    12781 cgttaccgta acttcggcat catggctcac atcgatgccg gcaagaccac cacgtccgag
    12841 cgcatcctgt tctacaccgg caagagccac aagatcggtg aagtgcacga cggcgccgcc
    12901 accatggact ggatggagca ggagcaggag cgtggcatca cgatccagtc cgctgccacc
    12961 accgcgttct ggaagggcat ggacaagtcc ctgccggagc accgcttcaa catcatcgac
    13021 acccccgggc acgtcgactt caccatcgaa gtggagcgct cgctgcgcgt gctcgacggt
    13081 gccgtcttcg tcctgtgtgc cgtcggtggc gtgcagccgc agtcggaaac cgtgtggcgc
    13141 caggccaacc gctacaaggt gccgcgcatc gcgttcgtca acaagatgga ccgcaccggt
    13201 gccaacttct acaaggtccg tgaccagctg aaggccaagc tcggcgccgt cgccgtgccg
    13261 atgcagctgc cgatcggtgc cgaagacggc ttcaagggcg tcgtcgacct gctgaagatg
    13321 aaggccatcc attgggatga agcctcgcag ggcatgaagt tcgagtacgg cgaaatcccg
    13381 gccgacctgc aggaaaaggc tgaagaagcc cgtacctaca tgatcgaaac cgcggctgaa
    13441 gccagcgaag agctgatgga aaagtacctg ggcggcgaag agctggccga ggctgaaatc
    13501 atcaacgcgc tgcgtacccg caccctggcc accgaaatcg ttccgatgta ctgcggttcg
    13561 gcgttcaaga acaagggcgt gcaggccatg ctggacggcg tgatccagct gctgccgtcg
    13621 ccggtcgatg tgccggacgt gaccggtacc gacgtggacg acgaaaacgt cgccatgacc
    13681 cgcaagtccg acgacaaggc tccgttctcg tcgctggcct tcaagatcat caccgatccg
    13741 ttcgtcggcg cgctgacctt cttccgtgtc tactcgggca ccctgaacgg tggtgacacc
    13801 gtgctgaact cggtgaaggg caagaaggag cgcatcggtc gcatcctgca gatgcactcg
    13861 aacaaccgcg aagaaatcaa ggaagttctg gccggtgaca tcgccgctgc cgtgggcctg
    13921 aaggacacca ccaccggtga caccctgtgc tcgatcgacc agccgatcat cctggagcgc
    13981 atgacgttcc cggagccggt gatctcgatg gccgtcgaac cgaagaccaa gtcggaccag
    14041 gaaaagatgg gcctggccct gggccgcctg gcgcaggaag atccgtcgtt ccgcgtcaag
    14101 accgacgaag aatccggcca gaccatcatc tcgggcatgg gcgagctgca cctggacatc
    14161 atcgtcgacc gcctgaagcg cgagttcaac gttgaagcca acgtcggcgc gccgcaggtt
    14221 gcgtaccgcg aaaccatcac cctggctgac gtcaagtcgg actacaagca cgccaagcag
    14281 tccggtggta agggtcagta cggtcacgtc gtgatcgagc tgtcgccgat caccgctgaa
    14341 gaccgtgccg atgccaagat cgctccgctg atcaaggacg acttcctgtt catcaatgac
    14401 atcactggtg gtgtcattcc gaaggaattc attccgtcgg tcgaaaaggg cctgcgcgaa
    14461 accatcacca gcggcccgct ggctggcttc ccggtcgtgg acgtcaaggt gaagctggtg
    14521 ttcggttcgt accacgacgt cgactcctcg gaaatggcgt tcaagctggc ttcgtcgatg
    14581 gccttcaagc agggcttcgc caaggccaag ccggtgctgc tggagccgat catgaaggtc
    14641 gagatcgtga ccccggagga ttaccagggt gacgtgatgg gcgacgtcag ccgtcgtcgc
    14701 ggcgtgctgc agggttccga caccaccggt gacggctccg cttcgatcat caacgcgatg
    14761 atcccgctgg gtgaaatgtt cggctacgcc actgcgctgc gttcgcagac ccagggccgc
    14821 gccaccttca ccatggaatt cgaccactac gagccggcgc cgaacaacat cgccgaagcc
    14881 gtcatgaaga agggctgagc ctcgctcagc ctctcctgaa aaccacttac aaaatcaagg
    14941 tatagaacaa tggcaaaggg taagttcgag cgcaccaagc cgcacgtcaa cgtcggcacc
    15001 atcggtcacg tcgaccacgg caagaccacg ctgaccgccg cactgaccaa gatcggtgcc
    15061 gagcgcttcg gtggcgagtt caaggactac tcctcgatcg acgccgcgcc ggaaga
//
LOCUS       DAOKIP010000092        15101 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.092,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000092 DAOKIP010000000
VERSION     DAOKIP010000092.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 15101)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15101)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15101
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.092"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(8..562)
                     /locus_tag="QEL58_002304"
     CDS             complement(8..562)
                     /locus_tag="QEL58_002304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019337921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676765.1"
                     /translation="MTEPTLHVTVKLNARLQPEHRHELFEDPLDALLQAAQVGELTGG
                     GTAMSDLGEVEYGDIEVALVDAAGVPKLIDLLEQLGAPKGSQLQGAGEADRSFGVTEG
                     LGIYLDGLTLPDEVYEQCDSNHVFEQLSENIDGLGEICSWWQGPTETALYMYGESFEA
                     MRDAIAGFVASYPLCQNARVVQIA"
     gene            complement(753..2945)
                     /gene="uvrD"
                     /locus_tag="QEL58_002305"
                     /gene_synonym="mutU"
                     /gene_synonym="recL"
     CDS             complement(753..2945)
                     /gene="uvrD"
                     /locus_tag="QEL58_002305"
                     /gene_synonym="mutU"
                     /gene_synonym="recL"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002809467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase II"
                     /protein_id="HDS1676766.1"
                     /translation="MDVSHLLDGLNPAQREAVSAPPGHHLVLAGAGSGKTRVLTHRIA
                     WLHEVDGVPTHGIFAVTFTNKAAGEMRHRIDAQLPNGSRGMWIGTFHGLANRLLRLHW
                     QDAKLPEGFQVMDSDDQLRLVKRVVQALELDDGKYPAKQIAWWINAQKDEGRRPQHIQ
                     PEPNDAWLETMRQAYIEYQARCDRAGLVDFAELLLRAHELLRDNPALLSHYRARFREI
                     LVDEFQDTNAIQYAFVRVLAGDSGHVFVVGDDDQAIYGWRGAKVENVQGFLRDFPGAQ
                     TIRLEQNYRSTANILGAANAVIAHNPDRIGKQLWTDSGDGEPIDLYAAYNEMDEARYI
                     VERARQWVRDGGSYTEVAVLYRSNAQSRALEEALLSEQVPYRVYGGMRFFERAEIKDA
                     LAYLRLLSNRNDDAAFERAVNTPTRGIGDRTLDEVRREARAQGISLWEATMLVTQGSA
                     LAARARNALAGFLVLVNELQAQTLHMTLAERVDHVLARSQLREHWSKESRNALDSESR
                     TDNLDELVSVASRFVRRADDIEEVGEDMDELVAFLAYAALEAGEGQAQAGEDGVQLMT
                     LHSAKGLEFPLVFLAGLEEGLFPSARSLEESGRLEEERRLAYVGITRARQKLVLSYAE
                     SRRIHGQDNYSLPSRFLREIPRELLHEVRPKVQVSRPASLGSSRVMGHASIEAPPLKL
                     GALVTHPKFGEGMVTDYEGSGAHARVQVEFADAGSKWLVMAYANLTVI"
     gene            complement(2955..4376)
                     /locus_tag="QEL58_002306"
     CDS             complement(2955..4376)
                     /locus_tag="QEL58_002306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006402496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD/NAD(P)-binding protein"
                     /protein_id="HDS1676767.1"
                     /translation="MAYNRPMTDSPRNGELDLAIIGGGAAGVLVAIQVLRQARAPLAL
                     AIFEPASQLAQGIAYATPWPEHLLNVPAAKMSAFADAPGDFLDYLMAANAYPGEAREV
                     LGERYVCRHYFAAYLQQRLQDAAAASPAQLQVIAQPVLGLQPDDHGYQLQLGDGQTLH
                     AAQAVLATGNSMRPLPVAGADALPADDVIEAWDYDGVRTLAGEQAVAIVGSGLSMADT
                     VLALVAAGHTGPLHVISRHGLLPLPHAHGGLPSFDPATLLPMNLRQRLRALRQFAGQA
                     QAEGVPWQGVMDRIRPHGQALWCSLDEADQRRFLRHVVRYWDVHRHRIAEEVDSQLQA
                     LQDSGQLRIHRSRLQRVWREGGAVQLSGRDASGNEQQWTIGGVINATGVETRASALRN
                     PLLQQLQADGLARPGPHGLGLDSTVPGDRLCATGGQPQARLGVLGSLRIGSLWESLAV
                     PELRQQAHALATQVVAGAATAMP"
     gene            complement(4422..5840)
                     /gene="cls"
                     /locus_tag="QEL58_002307"
     CDS             complement(4422..5840)
                     /gene="cls"
                     /locus_tag="QEL58_002307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016902730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cardiolipin synthase"
                     /protein_id="HDS1676768.1"
                     /translation="MLFEWLLGSYLLLIDWLIRLVALCWIPTRTTPGAARSWLLLVGF
                     VPLLGLPLYLLFGHPWLSRERIRRQAEASQVIREEQALQHRLRWTPQPDTACAEIVPL
                     VQRQGDFMPVHGNAVDLLTDYDESLHTLIADIDQAEDRVHLLYYLMFDDAVGEAVVEA
                     LQRAAARGVQCRVLLDAVGAKRGLRAYRKRLQARDIEVRAMLPGGLRWRRSGRMDLRN
                     HRKIAVIDNEVAYVGSQNLAGPGFVPGHPNRELVARVRGPAVAHLEAVFASDWYMETG
                     QRLDVIADVPECSDDIATQLLPSGPAYPYSNARDAVAALIHLARRRLVMVTPYFVPDE
                     ATLSALRIAALSGVQVQLILSASNNQRLTSWAQEAYYDELLRCGVRIALYEPQFLHAK
                     HMSVDEDIAVLGSINMDIRSFALNAEIGLICYDRALVQQLCAIEDGYLRESRQLDLQQ
                     WRSRPTWRRSREGIARLADALM"
     gene            complement(6125..6292)
                     /gene="rpmG"
                     /locus_tag="QEL58_002308"
     CDS             complement(6125..6292)
                     /gene="rpmG"
                     /locus_tag="QEL58_002308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001051801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HDS1676769.1"
                     /translation="MMAGKRDKVRMISTAGTGHFYTTDKNKKNTPGKMEFSKYDPVVR
                     KHVPYKEGKIK"
     gene            complement(6303..6539)
                     /gene="rpmB"
                     /locus_tag="QEL58_002309"
     CDS             complement(6303..6539)
                     /gene="rpmB"
                     /locus_tag="QEL58_002309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019185625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L28"
                     /protein_id="HDS1676770.1"
                     /translation="MSRVCQVSGKRVQTGNNVSHANNKTRRRFLPNLHERRFWVASEN
                     RWVKLRVSAHALRTIDKNGIDSVLAELRARGEKV"
     gene            complement(6777..7286)
                     /gene="dnaQ"
                     /locus_tag="QEL58_002310"
     CDS             complement(6777..7286)
                     /gene="dnaQ"
                     /locus_tag="QEL58_002310"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005411640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit epsilon"
                     /protein_id="HDS1676771.1"
                     /translation="MSRIVALDTETTGISHRLGHRVIEIGAVELIDGQLTGRQFHTYL
                     QPQRKVDWGAQRVHGISDAMLVGKPLFSSKAAELLAFLRGSEMVAHNATFDVGFLDNE
                     LRLSGISGTLAQHCRITCSLKLARGRWPGQGNKLDDVLQRLRIPGNRGLHGALKDAHL
                     LAQVIPHLR"
     gene            complement(7369..8262)
                     /locus_tag="QEL58_002311"
     CDS             complement(7369..8262)
                     /locus_tag="QEL58_002311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDS1676772.1"
                     /translation="MDRFEAMRAFARVVETGSFTRAALTLQVSRTTVTQLVQQLEAHL
                     RLRLLNRTTRRVSVTADGAAYYPRIARLLAELEEVEGGLGDAATQPRGRLRVDVPGPY
                     ARLRLVPALPDFQARYPEIQLDIGVSDREVDVIADNVDCVIRGGTPADPALVARPLAA
                     LPIGFHASPGYVQRFGLPTDPRVLEGPDHHVVGFLSPRSGRARVFSAQRGDERIEVQG
                     RYTVGFDDGNAYLAAALAGLGVVALPSYMAAPHVARGELLPVLQDWQLPSMPMHVMFP
                     PNRHMSQRLRVFIDWVVEVLG"
     gene            8371..8769
                     /locus_tag="QEL58_002312"
     CDS             8371..8769
                     /locus_tag="QEL58_002312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012481624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HDS1676773.1"
                     /translation="MSQRDVVFPTGRQALYERNRYSPAIRSNGLLFVSGQVGSREDGS
                     PEPDFEAQVRRAFENLNAVLAAAGCTFDDVIDVTVFLVDPEKNFEKAWAIVPEYWGEA
                     PHPTLTGIGVTWLYGFQFEIKVIAKLPADR"
     gene            9003..9335
                     /locus_tag="QEL58_002313"
     CDS             9003..9335
                     /locus_tag="QEL58_002313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005411643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676774.1"
                     /translation="MRRISRHLSSYLLMLLMAAFVVVPVADALACTVEPHASTVHVES
                     APDSDGDADGKHVGACGHNHCHHSNLSLPAHTLAAFGAPLPARWMNAGDAATYAVAQD
                     ELTRPPRA"
     gene            9392..10645
                     /locus_tag="QEL58_002314"
     CDS             9392..10645
                     /locus_tag="QEL58_002314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005411644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HDS1676775.1"
                     /translation="MSILTPRSPRAARLVVAVLLGLAPAASVMAQAAPSYDTLLERLD
                     QLPGTRVGTALAEAADARADQARALPNPSLSYSAENAWGTGSYGGMGKADTVLTLSQP
                     LEVWGQRGARVRAARAEAQAAALRGSQSRSDVASQLAVVYAQAESALRRYTLASEALA
                     LTRDDAAAVNAMVKQGREPQLRAVQAQSEVANATASLDEAQAFRDAALARLAGAALLD
                     APVQSIDNSLLDRAPPLPRGATDAALAVRIAEAEADAAGKLVEVERKRALPDLSVTAA
                     QTRFREGGERAYNLGVSLSIPLFDRNRGGIRAANADQRAAEARLDQQRRDSEAERLSA
                     VAGLKAAGSRTRAADESVVAAEEAYRLARVGFDAGRISQLELRSTRSALIAARGTAVD
                     ARLSRVGAEIDLARLEGRAPFVEAP"
     gene            10642..11847
                     /locus_tag="QEL58_002315"
     CDS             10642..11847
                     /locus_tag="QEL58_002315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010482371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HDS1676776.1"
                     /translation="MTLSRSFPLIGGLLLTVFLAGCAGNAQTPEAADATAAKAGTDDG
                     HGHAADSKEAKAESAKAPADADEGVVQLTPEQIKASGIEVVAVGRGGGGSTRLSGRVE
                     PSVGARASVASTVTGRVERVLVAPGTAVKQNQALAIVVSGEAAVFRANALAASAEAEA
                     ARLAYGRDKALVDQGVVARQELEASRARSLAAQAQAAAAQAQAAANGAPDASGRVRIT
                     SPVAGIVGNVQVTPGGVVAAGSAVADVADPAMNELVFTAPPALAAQVTPGMTLEVSVP
                     GGSFTATVTGSAADVRQQGGVAVIRATPVNAALPPAGSPVSAVVVTEGQDGSLSVPAD
                     AVQNVDGSSAVFVAVDGGFKAQPVLAGRRAGDRIEILGGLTGSERIVGANAFLLKAEL
                     AKGEAEHGH"
     gene            11858..15067
                     /locus_tag="QEL58_002316"
     CDS             11858..15067
                     /locus_tag="QEL58_002316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CusA/CzcA family heavy metal efflux RND
                     transporter"
                     /protein_id="HDS1676777.1"
                     /translation="MFKLIIETAVRHRWLVVFMAALIAAVGLFQLGKLPIDAVPDITN
                     RQVQINTVAPALTPEQIERQVTYPLETALAGIPGLTTTRSLSRNGFSQVTAIFTDATD
                     IYFARQQVAERMREASEDLPDGASPMLSPVTTGLGEVLMWTVDFTTFDPARLAKPGEA
                     GWQAGEVYRTPEGNLLRTPEERATYLRTVQDWIIAPQMRSSPGLAGVDTVGGYVKEYG
                     VHPDSARLAAHGLGLADLVTALQRSNVQAGAGFVQRAGEGLVVRADGLALTTEDLAQA
                     PVATRNGVVVRVADVAEVELSRAPRLGAASRNGHEAVLGTALMIAGGNSRTVAQAAAA
                     RLEQVNTSLPADIVAAPVLDRSVLVNSTIKTVAKNLTEGALLVVVVLFLLLGNLRAAT
                     ITALVIPLSFLFAVIGMNRFGISGNLMSLGALDFGILVDGAVIVVESTLLMLGQRRAE
                     LGRALTAMERLRVAADSAMKMARPAAFGQLIILLVFAPILTLEGVEGKTFHPMAATFM
                     LALVGAFIFSFTFVPAMAALLVREPKVKDGDAHANDGEHETKLIRVLRARIEPVVRKA
                     VAHPRTVLAGAVMMVVVGIGSFSLLGREFMPTLDEGNVAMQALRVPSTSLEQSLAMQL
                     ALEKAIAKQPEVETVFSRTGTAEAAIDPMPTNISDSVIVLKPRKDWPDPTLGKDALVA
                     RFETLAGQQLGNSFEFSQPIELRFNELISGVRTDLAVMIFGDDFSQLQKVADQVALKL
                     RAVEGAADVRVEQISGLPTLNVAIDHVAAAQYGLTAADVSDALSTGIGGTAAGKIFEG
                     DRRFNVVVRLDDASRNDPDQLASLPIATPSGLVIPLSSVARITVSEGPNQISRNNGSR
                     RVVVQANVRGRDLGGFVGEAQAAVADVALPPGAYLTWGGQFENLQRAEKRLATVVPVV
                     FLLIGSLLFMALRSGKEAILVFSCVPLALVGGILALLLRGMPFSVSAAVGFIAVSGVA
                     TLNGLVLMQAIRERLDAGDLPLQAAINGASSRIRAVLTTALVAIVGFIPMAIASGSGA
                     EVQKPLATVVIGGLITATVLTLLVLPTFAARVAKPRAVG"
BASE COUNT         2364 a         5146 c         5163 g         2428 t
ORIGIN      
        1 gctttgttca ggcgatctgc accacgcgtg cgttctggca cagcgggtag ctggccacga
       61 atccagcgat cgcgtcacgc attgcctcga acgattcgcc atacatgtac agcgcggtct
      121 cggtcgggcc ctgccaccag ctgcagatct cgcccaggcc gtcgatgttc tccgacagct
      181 gttcgaacac gtggttggaa tcgcactgct cgtagacttc gtccggcagg gtcagcccgt
      241 ccaggtagat gcccaggcct tcggtcacgc cgaagctgcg gtcggcctcg cccgcaccct
      301 gcagctgcga gcccttcggt gcacccagct gctccagcag atcaatcagc ttcggtacgc
      361 cggcggcatc gaccagcgct acttcgatat cgccgtactc gacctcaccc aggtcggaca
      421 tcgcggtccc gccgccggtc agctcgccca cctgggccgc ctgcagcagc gcatcgagcg
      481 gatcctcgaa cagttcatgg cggtgctccg gctgcagccg ggcgttcagc ttcacggtga
      541 cgtgcagcgt gggttctgtc atgggggcgc tcctggaagg tgtcaggccc cattgtagag
      601 tccaaggtag cggcaggagc cgctgccaac gtcgcttgcg acggcccgaa gggtgccggt
      661 caggacgacc ggcatagctt gctcgactgc cttcccgcca gaagcagccg agcatggctc
      721 ggctctacag gcttcccgcc ccctgacggt gatcagatca ccgtcaggtt ggcatacgcc
      781 atcaccagcc acttgctgcc ggcgtcggcg aattcgacct gaacgcgggc gtgtgcgccg
      841 ctgccttcgt agtcggtcac catgccttcg ccgaacttgg gatgggtgac cagtgcgccg
      901 agcttgagcg gcggtgcctc gatcgaagca tggcccatca cccggctgct gcccaacgag
      961 gccggccgcg agacctgcac cttcgggcgg acttcgtgca gcagctcgcg tgggatctcg
     1021 cgcaggaagc gcgagggcag gctgtagttg tcctggccgt ggatgcgacg cgattcggcg
     1081 tagctcagca ccagcttctg gcgcgcgcgg gtgatgccca cgtaggccag gcggcgctct
     1141 tcttccagcc gcccgctttc ctccagcgag cgtgcgctgg ggaacaggcc ttcttccagg
     1201 ccggccagga acaccagcgg gaattccagg cccttggccg agtgcagggt catcagctgc
     1261 acgccgtcct cgcccgcctg cgcctggccc tcaccggcct ccagcgcggc ataggccagg
     1321 aacgcgacca gctcgtccat gtcctcgccc acttcctcga tgtcgtcggc gcggcgcacg
     1381 aagcgcgagg ccaccgagac cagttcgtcg aggttgtcgg tgcgcgattc cgaatccagc
     1441 gcgttgcggc tttccttgct ccagtgctcg cgcagctgcg agcgggccag cacgtggtcc
     1501 acgcgctcgg ccagggtcat gtgcagggtc tgcgcctgta gctcgttgac cagcaccagg
     1561 aagccggcca gcgcattgcg cgcacgtgcg gccagcgcgc tgccctgggt gaccagcatg
     1621 gtcgcttccc acagcgagat accctgcgcg cgcgcctcgc ggcgcacttc gtccagcgtg
     1681 cggtcgccga tgccacgggt gggcgtgttg accgcgcgct cgaacgccgc gtcatcgttg
     1741 cggttggaca gcaggcgcag gtaggccagt gcgtccttga tttcggcacg ctcgaagaag
     1801 cgcatgccgc cgtacacgcg gtacggcacc tgttcgctca gcagcgcttc ttccagcgcg
     1861 cgcgactgcg cgttgctgcg gtagagcacg gccacttcgg tatagctgcc accgtcgcgc
     1921 acccactggc gcgcgcgctc gacgatatag cgcgcttcgt ccatctcgtt gtacgcggca
     1981 tacaggtcga tcggctcgcc gtcgccgctg tcggtccaca gctgcttgcc gatgcggtcc
     2041 gggttgtgcg cgatcaccgc gttggcggcg ccgaggatgt tggcggtgga gcggtagttc
     2101 tgttccaggc ggatggtctg cgcgcccggg aagtcacgca ggaagccctg cacgttctcc
     2161 accttggcac cgcgccagcc atagatggcc tggtcgtcgt caccgaccac gaacacgtgg
     2221 ccggaatcac cggccagcac gcgcacgaag gcgtactgga tggcgttggt gtcctggaac
     2281 tcgtccacca ggatctcgcg gaagcgggca cggtaatgcg acagcaacgc cgggttgtcg
     2341 cgcagcagct catgcgcgcg cagcagcagc tcggcgaagt cgaccaggcc ggcgcggtcg
     2401 cagcgtgcct ggtactcgat atatgcctgg cgcatggttt ccagccacgc gtcgttcggt
     2461 tcgggctgga tgtgctgcgg gcggcggcct tcgtccttct gcgcgttgat ccaccacgcg
     2521 atctgcttgg ccggatactt gccgtcgtcc agttccagcg cctgcaccac gcgcttgacc
     2581 agccgcagct ggtcgtccga atccatcacc tggaagcctt cgggcagctt cgcgtcctgc
     2641 cagtgcaggc gcagcaggcg gttggccagg ccgtggaagg tgccgatcca catgccgcgg
     2701 ctgccgttgg gcagctgcgc gtcgatgcgg tggcgcattt cgccggccgc cttgttggtg
     2761 aaggtcaccg cgaaaatgcc gtgggtcggc acgccatcga cttcatgcag ccaggcgatg
     2821 cggtgggtga gtacgcgggt cttgccggaa ccggcaccgg ccagcaccag gtggtggccg
     2881 gggggagcgg agacggcttc gcgctgggcc gggttcaggc catcaagcag gtgggagaca
     2941 tccatgcccc cattttacgg catcgccgtc gcggctcctg cgaccacctg ggtggccagt
     3001 gcgtgcgcct gctgacgcag ttcaggcacg gccaggcttt cccacaagct gccgatgcgc
     3061 aggctgccga gcacgcccaa tcgtgcctgt ggctggccgc cggtggcaca caggcgatca
     3121 cccggcaccg tgctgtccag gcccagcccg tgcgggccag ggcgggccag cccatcggcc
     3181 tgcagctgct gcagcaacgg attgcgcagc gcgctggcac gggtttccac gccggtggcg
     3241 ttgatcaccc cgccgatcgt ccactgctgt tcattgcccg aggcatcgcg gccggacagc
     3301 tgcacggcgc cgccctcgcg ccagacgcgt tgcaggcggc tgcggtgaat gcgcagctgg
     3361 ccgctgtcct gcagcgcctg caactgcgaa tccacttctt cggcgatgcg atggcgatgc
     3421 acgtcccaat agcgcaccac atggcgcagg aagcggcgct ggtcggcctc atcgaggctg
     3481 caccacagtg cctgcccgtg cggacggatg cggtccatca cgccctgcca cggcacacct
     3541 tcggcctgtg cctgcccggc aaactggcgc aacgcacgca ggcgctggcg caggttcatc
     3601 ggcagcagcg tggccgggtc gaagctcggc aggccgccgt gcgcgtgcgg caacggcagc
     3661 aggccatggc gcgagatcac gtgcagcgga ccggtgtggc cagcggcgac cagcgccagc
     3721 acggtgtcgg ccatgctcag gccggaaccg acaatggcca ccgcctgctc accggccagg
     3781 gtgcgtacgc cgtcgtagtc ccaggcctcg atcacatcgt cggcaggcag cgcatcggcg
     3841 ccggccaccg gcagcgggcg catgctgtta ccagtggcca gcaccgcctg tgcggcgtgc
     3901 agcgtctggc catcgcccag ctgcagttgg taaccatggt catccggctg caggcccagc
     3961 accggctgcg cgatcacctg cagctgcgcc gggcttgccg cggcggcatc ctgcaggcgc
     4021 tgctgcaggt aggcggcgaa gtagtggcgg cacacgtagc gctcgcccag cacctcgcgc
     4081 gcctcgcccg ggtaggcatt ggcggccatc aggtagtcga ggaaatcgcc gggcgcgtcg
     4141 gcaaacgcgc tcatcttcgc cgccggcacg ttcagcagat gctccggcca cggcgtggca
     4201 taggcgatgc cttgcgccag ctgcgaggcc ggctcgaaga tggccagcgc cagcggcgca
     4261 cgggcctggc gcaatacctg gatcgccacc agcaccccgg ccgcaccacc accgatgatc
     4321 gccaggtcca gttcgccatt acgcggtgaa tcagtcatgg gccgattgta ggccatcggc
     4381 gatgacaggc cggcgtgccg aagcgggcgg ttactgcggc ctcacatcaa cgcatcggcc
     4441 aggcgtgcga tgccttcgcg gctgcgccgc cacgtcgggc ggctgcgcca ctgctgcagg
     4501 tccagctgcc gcgactcccg caggtagccg tcctcgatcg cgcacagctg ctggaccagc
     4561 gcgcggtcgt agcagatcag gccgatttcg gcattcagcg cgaacgagcg gatatccatg
     4621 ttgatcgagc caagcacggc gatgtcctcg tccacgctca tgtgcttggc gtgcaggaac
     4681 tgcggttcgt acagggcgat gcgcacgcca cagcgcagca gctcgtcgta gtacgcctcc
     4741 tgcgcccacg aggtcagccg ctggttgttg ctggccgaca ggatcagctg cacctgcacg
     4801 ccggacaacg ccgcgatgcg cagcgcgctc agcgtggctt cgtcgggcac gaagtacggg
     4861 gtgaccatca ccagccggcg ccgcgccagg tggatcagtg ctgccaccgc atcgcgcgcg
     4921 ttgctgtacg gataggccgg accgctgggc agcagctggg tggcgatgtc atcgctgcac
     4981 tcgggcacat cggcgatcac atccaggcgc tggccggttt ccatgtacca gtcgctggcg
     5041 aacaccgctt ccagatgcgc caccgccggg ccacgcacgc gcgccaccag ctcgcggttc
     5101 gggtggccgg gcacgaaccc ggggccggcc aggttctgcg aaccgacgta ggccacctcg
     5161 ttgtcgatca ccgcgatctt gcggtggttg cgcaggtcca tgcgcccgct gcggcgccag
     5221 cgcaggccac cgggcagcat cgcgcgcact tcgatgtcgc gcgcttgcag gcgcttgcgg
     5281 taggcgcgca ggccgcgctt ggcgcccacc gcgtcgagca gcacgcggca ctgcacgccg
     5341 cgtgcggccg cacgctgcag cgcctcgacc accgcctcgc ccaccgcatc atcgaacatc
     5401 aggtagtaca gcaggtgcac gcggtcttcg gcctggtcga tgtcggcgat cagcgtgtgc
     5461 agcgattcgt cgtagtcggt cagcaggtcc accgcgttgc cgtgcaccgg catgaaatcg
     5521 ccctggcgct gcaccagcgg cacgatctcg gcgcaggcgg tgtccggttg cggggtccag
     5581 cgcaggcggt gctgcaatgc ctgttcctcg cggatgacct gcgaggcctc ggcctggcgg
     5641 cggatgcgct cgcgcgacag ccatgggtgg ccgaacagca gatacagcgg caggcccagc
     5701 agcggcacga agccgaccag cagcagccag ctgcgcgccg cccccggcgt ggtgcgggtg
     5761 gggatccagc acagcgcgac cagccggatc agccagtcga tcagcagcag gtacgaaccc
     5821 agcaaccact cgaacagcat cgcgtcgccc gtcgggaggt gatgggccat tctgcccagc
     5881 agggtgtgta gagtcgagct tgctcgactg ctttgaacca gcgtgccgac caaggtcgac
     5941 acctaccggg tgtgggggac agtgtgccga ccaaggtcga cacctaccgg gtgtggggac
     6001 agcgtgccga ccaaggtcgg cacccaccac ggcaatgcag gaagtaccca ccacctggat
     6061 gccagacatg aaaaaacccg ccacaagggc gggtttcttc gcggggacca gcaatccttg
     6121 cggattactt gatcttgcct tccttgtacg ggacgtgctt gcgcacgacc ggatcgtact
     6181 tggagaattc catcttcccc ggggtgttct tcttgttctt gtcagtcgtg tagaagtgac
     6241 cggtaccggc ggtcgaaatc atacggacct tatcgcgctt gcctgccatg atcgtctact
     6301 cctcagacct tttcgccgcg cgcacgcagc tcagccagaa cggaatcaat gccgttcttg
     6361 tcgatggtgc gcagtgcatg cgcggaaaca cgaagcttca cccagcggtt ctcgctggca
     6421 acccagaagc ggcgctcgtg caggttgggc aggaaacgac gacgggtctt gttgttggcg
     6481 tgcgagacgt tgttaccggt ctgcactcgc ttgccggaaa cctggcatac gcgggacatg
     6541 gcgcacctcg atagtaagtt gtgtcagccc gtagcccggg agacggcggc ctcggtggtt
     6601 gcccaccaca cgtcaagaga atcaaagggt tacgctggcg ttgggcggcc ggggacgtgc
     6661 tcccgggggc gccgcccggt agaaaaccgg acacagcgag ccgcgcatta tgcacgggtt
     6721 caagcacttg cgcaagttac ccacaggccg cggctgaaca cgcccggtgg cgagtttcaa
     6781 cgcaggtgcg gaatcacctg cgccagcaga tgggcatcct tcaacgcacc gtgcaggcca
     6841 cggttgcccg gaatgcgcag gcgctgcagt acatcgtcca gcttgttgcc ctggcccggc
     6901 cagcgcccgc gcgccagctt caggctgcag gtgatgcggc agtgctgggc cagcgtgccg
     6961 gaaatgccgg acaggcgcag ctcgttgtcc aggaagccca cgtcgaaggt ggcgttgtgc
     7021 gcgaccattt cgctgccgcg caggaacgcc agcagttcgg cggccttgct ggagaacagc
     7081 ggcttgccca ccagcatcgc atcgctgatg ccatgcacac gctgtgcgcc ccagtcgacc
     7141 ttgcgctgcg gctgcaggta ggtgtggaac tggcggccgg tgagctggcc atcgatcagt
     7201 tcaacggcac cgatttcgat cacgcgatgg ccgagccgat gggagatgcc ggtggtttcg
     7261 gtatccagtg cgacgatgcg gctcatgcgt gatgaagttt cctgttgcgt gccgtggcga
     7321 ttttcgcacg tgccgcagcg tgagtggatt cggaaacgtt gcagatgctc accccagcac
     7381 ctccaccacc caatcaatga acacccgcag ccgctggctc atgtgccggt tcggcgggaa
     7441 catcacatgc atcggcatcg atggcagctg ccagtcctgc aacaccggca acagctcgcc
     7501 acgtgccacg tgcggcgcgg ccatgtagct tggcagcgcc accacgccca gtccggccag
     7561 cgcagcggcc agataggcgt tgccgtcgtc gaagccgacc gtgtagcggc cctgcacctc
     7621 gatgcgttca tcgccacgct gcgcgctgaa cacccgggcc cggccactgc gcgggctgag
     7681 gaaaccgacc acgtggtgat cgggcccttc cagcacacgc gggtcggtcg gcaggccgaa
     7741 gcgctgcaca tagcccgggc tggcgtggaa accgattggc agcgcagcca gcggccgcgc
     7801 caccagtgcc gggtcggccg gggtgccgcc gcggatcacg cagtcgacgt tgtcggcgat
     7861 gacatcgacc tcgcgatcac tcacgccgat atccagctga atctccgggt agcgcgcctg
     7921 gaaatccggc agcgccggca ccagccgcaa ccgcgcgtaa ggcccgggca cgtccacgcg
     7981 caggcgccca cgcggctggg tggccgcatc gcccagcccg ccctccacct cttccagctc
     8041 ggccagcagg cgggcgatgc gcgggtaata ggccgccccg tcggcggtga cactgacccg
     8101 gcgcgtggtg cggttaagca ggcgcagccg caggtgcgcc tccagctgct gtaccagctg
     8161 ggtgaccgtg gtgcggctga cctgaagcgt gagcgcggca cgggtgaagc tgccggtctc
     8221 caccacccgg gcaaacgccc gcatcgcctc gaagcggtcc atgacaggcc gttattgttt
     8281 gggattggca accaatctag gccgatcatc gcggtttatc cagacagcga aggggcggac
     8341 gatggcgttc ttcccaaccg attccttccc atgtcacagc gtgatgtcgt tttccccacc
     8401 ggccgccagg ccctgtacga gcgcaaccgc tactcgccgg cgatccgttc caatggcttg
     8461 ctgttcgtct ccggccaggt cggcagccgc gaggacggct cgcccgagcc ggacttcgaa
     8521 gcgcaggtgc gccgcgcctt cgagaatctc aacgcggtgt tggctgccgc gggctgcacg
     8581 ttcgatgacg tgatcgacgt gaccgtgttc ctggtcgacc ccgagaagaa cttcgagaag
     8641 gcgtgggcga tcgtgcccga gtactggggc gaggcgccac acccgaccct gaccggcatc
     8701 ggcgtgacct ggctgtacgg gttccagttc gagatcaagg tgatcgcgaa gctgcctgca
     8761 gaccggtagt gccggccgct ggccggcagc atcgaaaggc gtgtcgacca aggtcgacac
     8821 ccaccagggc aggaagtcga cacccaccgg ggcaggaagt cgacacccac cggggcagga
     8881 ggtcagcatc caccagggca ggaggcccgc aggatcgccc acctgaacgg gagattccga
     8941 cgaattcccg aagcgcccat tgatattgta tccggcgaaa accgcttgct agcctcccct
     9001 tcatgcgccg gatctcccgc caccttagct cgtacctgct gatgctgctg atggcggcgt
     9061 tcgtggtcgt gccggtggcc gacgcactgg cgtgcacggt ggaaccgcac gccagcacgg
     9121 tgcacgtgga gtccgcgccg gattccgatg gcgatgccga cggcaagcat gtcggtgcct
     9181 gtggccacaa ccactgccac cactccaacc tgagcctgcc ggcacacacg cttgccgcct
     9241 tcggcgcgcc gctgccggcg cgctggatga atgcaggcga tgcggcgacc tatgcggtcg
     9301 cccaggatga attgacgcgt cctccccggg cgtgagttga gcgcgtcccg cgattgcggg
     9361 ctcccgtttc actcacaacc ggaatccccc tatgtcgatc ctgacacctc ggtcgccgcg
     9421 cgcggccagg ctggtcgtcg ctgtgctgct gggcctggcc ccggcggcat cggtgatggc
     9481 gcaagccgcc ccctcctacg acaccctgct tgaacgcctg gaccagctgc ccggcacccg
     9541 tgtgggcacg gcactggccg aggccgccga tgcgcgcgcc gaccaggccc gtgcgttgcc
     9601 caacccttcc ctttcctact cggccgaaaa tgcctggggc accggctcct atggcggcat
     9661 gggcaaggcc gacaccgtgc tcaccctgtc ccagccgctg gaggtctggg gccaacgagg
     9721 cgcgcgcgtc cgggccgccc gggccgaggc acaggccgct gccctgcgtg gttcgcagag
     9781 ccgcagtgat gtcgccagtc aactggcggt ggtctacgca caggcggaaa gtgcattgcg
     9841 tcgttacacc ctcgccagcg aagcgctcgc gctgacccgc gatgatgcgg ccgccgtcaa
     9901 cgcgatggtc aagcagggac gcgaaccgca gctgcgcgcg gtgcaggcgc agagcgaagt
     9961 ggccaatgcc acggcgtcgc tggatgaagc acaggcgttc cgcgacgcgg cgctggcgcg
    10021 gctggccggt gccgcgttgc tggatgcgcc ggtgcagtcg atcgacaaca gcctgctcga
    10081 ccgcgccccg ccgctgccgc gtggcgccac cgacgccgca ctggcggtgc gtatcgccga
    10141 agcggaagcc gatgcggccg gcaagctggt cgaggtggag cgcaagcgcg ccctgcccga
    10201 cctcagcgtc actgccgcgc agacccgctt ccgcgaaggt ggcgagcgtg cctacaacct
    10261 cggggtcagc ctcagcatcc cgctgttcga ccgcaaccgc ggtggcatcc gcgccgccaa
    10321 tgccgaccaa cgcgcggccg aggcacgcct ggaccagcag cgccgcgaca gcgaggccga
    10381 acgcctgtcc gccgtggccg ggctgaaggc cgccggcagc cgtacccgcg ccgccgatga
    10441 aagcgtggtc gccgccgaag aggcgtatcg cctcgcacgc gtcggcttcg acgccggacg
    10501 catctcgcag ctggaactgc gcagcacgcg cagcgctctc atcgccgccc gcggcaccgc
    10561 cgtggacgcg cgcctgtcgc gcgtcggcgc cgaaatcgat cttgcccgcc ttgaagggcg
    10621 cgcacctttt gtggaggccc catgactctc tcccgttcct tccccctgat cggcggcctc
    10681 ctgctgaccg tgttcctggc cggctgcgcc ggcaatgcgc agacgcccga agcggccgac
    10741 gccaccgccg ccaaggccgg taccgacgat ggccacggcc atgccgccga cagcaaggag
    10801 gccaaggcgg aaagcgccaa ggcccccgcc gacgccgatg aaggcgtggt gcagctgacc
    10861 ccggaacaga tcaaggcgtc cggtattgaa gtggtcgccg tcggccgcgg cggtggcggt
    10921 tcgacccgcc tgtccggccg ggtcgaaccg tcggtaggcg cacgtgcctc ggtcgcctcc
    10981 acggtgaccg gccgcgtcga acgcgtgctg gtcgcgccgg gcacggcggt gaagcagaac
    11041 caggcgctgg ccatcgtggt cagtggcgaa gctgcggtgt tccgcgccaa tgcgctggct
    11101 gcgtcggccg aagccgaggc cgcgcgcctg gcctatggcc gcgacaaggc actggtcgac
    11161 cagggcgtgg tcgcccgcca ggagctggaa gcctcgcgcg cccgctcgct ggcagcacag
    11221 gcccaggccg ccgccgcgca ggcccaggcc gccgccaacg gtgcgcccga tgccagtggc
    11281 cgcgtgcgca tcaccagccc ggtggccggc atcgtcggca acgtgcaggt caccccgggt
    11341 ggcgtggtcg ccgccggcag cgcagtggcc gacgtcgccg atccggcgat gaacgagctg
    11401 gtgttcaccg cgccgccggc gctggccgca caggtcacgc cgggcatgac gctggaagtg
    11461 agcgtgccgg gcggcagctt caccgccacc gtcaccggtt cggccgccga tgtgcgccag
    11521 cagggcggtg tggcggtgat ccgtgccacg ccggtgaatg ccgcgctgcc gccggctggt
    11581 tcgccggtct cggcggtggt ggttaccgag ggccaggacg gttcgctcag cgtgcccgcc
    11641 gatgcggtgc agaacgtcga tggcagcagc gcggtgttcg tcgccgtcga cggcggcttc
    11701 aaggcgcagc cggtgctggc cgggcgccgt gctggcgacc gcatcgagat cctcggcggg
    11761 ctgaccggca gcgagcgcat cgtcggcgcc aatgccttcc tgctcaaggc cgaactggcc
    11821 aagggcgaag ccgagcacgg ccactgagga ggcgaccatg ttcaagctga tcattgaaac
    11881 agcggtgcgc caccgctggc tggtggtgtt catggcggcg ctgatcgctg ccgtgggcct
    11941 gttccagctg ggcaagctgc cgatcgacgc ggtgccggac atcaccaacc gccaggtgca
    12001 gatcaacacg gtggcaccgg cgctgacccc ggaacagatc gaacggcagg tgacctaccc
    12061 gctggaaacc gcgctggccg gcattcccgg cctgaccacc acgcgctcgc tgtcgcgcaa
    12121 tggcttctcg caggtcaccg cgatcttcac cgatgcgacc gacatctact tcgcccgcca
    12181 gcaggtggcc gagcgtatgc gcgaagcatc cgaagacctg cccgatggcg cgtcgccgat
    12241 gctgtcgccg gtcaccaccg gcctcggcga agtgctgatg tggacggtgg acttcaccac
    12301 cttcgatccg gccaggctag ccaagcccgg tgaagcgggc tggcaggccg gcgaggtcta
    12361 ccgcacgccg gaaggcaacc tgctgcgcac gccggaagaa cgcgccacct acctgcgcac
    12421 cgtgcaggac tggatcatcg cgccgcagat gcgttccagc ccggggctgg ccggcgtcga
    12481 tacggtcggc ggctacgtca aggaatatgg agtgcatccg gacagcgccc ggctggccgc
    12541 gcacggcctt ggcctggccg atctggtcac tgccctgcag cgctccaacg tgcaggccgg
    12601 tgccggtttc gtgcagcgtg caggcgaagg cctggtggtg cgtgccgatg gcctggcgct
    12661 gaccaccgag gacctggcac aggccccggt agccacccgc aatggcgtgg tggtgcgcgt
    12721 ggccgatgtg gccgaagtcg aactaagccg cgcaccacgc ctgggtgcgg ccagccgcaa
    12781 tggccatgaa gccgtgctgg gtaccgcact gatgattgcg ggtggcaaca gccgcaccgt
    12841 ggcgcaggcc gctgccgcac gccttgaaca ggtgaacaca tcgctgccgg ccgacatcgt
    12901 ggcggcaccg gtgctggacc gcagcgtgct ggtcaattcc accatcaaga ccgtggccaa
    12961 gaacctcacc gagggcgcgc tgctggtggt ggtggtgctg ttcctgctgc tgggcaacct
    13021 gcgtgcggcg acgatcaccg cgctggtgat tccgctgtcg ttcctgttcg cggtgatcgg
    13081 catgaaccgc ttcggcatca gcggcaacct gatgagcctg ggcgcactgg acttcggcat
    13141 cctggtggac ggtgcggtca tcgtggtcga gtcgaccctg ctgatgctgg gccagcgccg
    13201 cgccgaactg ggccgtgcgc tgaccgcgat ggaacggctg cgcgtggccg ccgattcggc
    13261 catgaagatg gcgcgccctg cggccttcgg ccagttgatc atcctgctgg tgttcgcgcc
    13321 gatcctcacc ctggaaggcg tggagggcaa gaccttccac ccgatggcgg ccaccttcat
    13381 gctggccctg gtcggtgcct tcatcttctc cttcaccttc gtgccggcga tggccgcgct
    13441 gctggtgcgc gagccgaagg tgaaggacgg cgatgcgcat gcgaacgacg gtgagcacga
    13501 gaccaaactg atccgcgtgc tgcgtgcgcg catcgaaccg gtggtgcgca aggccgtggc
    13561 gcatccgcgc acggtgctgg ccggtgcggt gatgatggtg gtggtgggca tcggttcgtt
    13621 ctcgctgctg ggccgcgagt tcatgccgac gctggacgaa ggcaacgtgg cgatgcaggc
    13681 cctgcgcgtg ccgtcgactt cgctggagca gtcgctggcg atgcagctgg cactggaaaa
    13741 ggcgattgcc aagcagccgg aagtagaaac cgtgttctcg cgcaccggta ccgccgaggc
    13801 ggccatcgat ccgatgccga ccaacatctc cgacagcgtg atcgtgctga agccacgcaa
    13861 ggactggccg gatccgacgc tgggcaagga cgcgctggtg gcacgcttcg aaacgctggc
    13921 cgggcagcag ctgggcaaca gcttcgagtt cagccagccg atcgagctgc gcttcaacga
    13981 gctgatttcc ggcgtgcgta ccgacctggc ggtgatgatc ttcggcgatg acttcagcca
    14041 gctgcagaag gtggccgacc aggtggcgtt gaagctgcgt gcggtggagg gcgcggccga
    14101 cgtgcgggtg gagcagatct ccggcctgcc cacgctgaac gtggccatcg accacgtggc
    14161 cgcagcgcag tacgggctga ccgcggcgga cgtgagcgat gcgctgtcca ccggcatcgg
    14221 tggtaccgcg gccggcaaga tcttcgaagg tgatcgccgc ttcaacgtgg tggtgcgcct
    14281 ggacgatgcc tcgcgcaacg atccggacca gctggcatcg ttgccgatcg ctacgccgtc
    14341 aggactggtg attccgctgt cgtcggtcgc gcgcatcacg gtcagcgaag ggccgaacca
    14401 gatcagccgc aacaacggca gccgccgcgt ggtggtgcag gccaacgtgc gtggccgcga
    14461 cctgggtggc ttcgtcggcg aggcacaggc ggcggtggcc gacgtggcgc tgccgccggg
    14521 cgcctacctg acctggggcg gccagttcga gaacctgcag cgcgccgaga agcggctggc
    14581 aacggtggtg ccggtggtgt tcctgctgat cggcagcctg ctgttcatgg ccctgcgcag
    14641 cggcaaggaa gccattctgg tattcagctg cgtgccgttg gcgctggtcg gcggcattct
    14701 cgcgctgctg ctgcgtggca tgccgttctc ggtgtcggcg gcggtcggct tcatcgccgt
    14761 ctccggcgtg gccaccttga atgggctggt gctgatgcag gcgatccgcg agcgcctgga
    14821 tgccggtgac ctgccgctgc aggcggcgat caacggtgcg tcgagccgca tccgcgcggt
    14881 gctgaccacg gcgctggtgg cgatcgtcgg tttcattccg atggcgatcg ccagtggctc
    14941 cggtgcggag gtgcagaagc cgctggcgac ggtggtgatc ggcggcctga tcaccgccac
    15001 cgtgctgacc ctgctggtgc tgccgacctt cgcggcacgg gtggccaagc caagggcggt
    15061 ggggtgaaac atgacggggt cggatcctgc gatccgaccc c
//
LOCUS       DAOKIP010000093        15089 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.093,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000093 DAOKIP010000000
VERSION     DAOKIP010000093.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 15089)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15089)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15089
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.093"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(4..546)
                     /locus_tag="QEL58_002317"
     CDS             complement(4..546)
                     /locus_tag="QEL58_002317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDS1676778.1"
                     /translation="MSIFDLRLETERLVLRPLLREDYEAYLAFCADEETMRTLGGVQP
                     PSVAWRGFCSLAGAWQLFGFSMFSVIEKSSGEWIGRMGPWQPQDWPGTEVGWGIRHAS
                     WGRGYAPEAAVAAIDWAFDTLGWDEVIHTIAENNDNSRAVARKLGSTLLRMGELPPPY
                     NDKPMQIWGQSREQWRKRAR"
     gene            complement(678..1523)
                     /locus_tag="QEL58_002318"
     CDS             complement(678..1523)
                     /locus_tag="QEL58_002318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine zipper 2TM domain-containing protein"
                     /protein_id="HDS1676779.1"
                     /translation="MKSTTTTVLVAAGALLVGGIATAAFMKSGDTSPDSISAGTPNAE
                     SRLADGNAIDDGARGDTLDPSAPRGLEYADVLKVDPITEKQKAYATVIGTDPVRETST
                     TQTPHEVCQDVTVQERLPERDGNVGGTVVGAVVGGLLGNQVGGGNGKKAATAAGAVAG
                     GFIGNQIDKRHVGGRVVNRTERQCHTETATSESSRVTGYNVTYRNEDGTTGTMRMASK
                     PGNRIAMGNTDVVKGYNVTYRYDGAEKTVRMDNKPASDRLPVVDGQLVTQTAAAGATA
                     AATRQ"
     gene            1687..1902
                     /locus_tag="QEL58_002319"
     CDS             1687..1902
                     /locus_tag="QEL58_002319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676780.1"
                     /translation="MANAMLLPVLQWARRLRYPTLFKLTAGLFVLTLFIPDPIPFVDE
                     LVLGFGTLLLANWKSRNATPPSPLEQR"
     gene            1899..2672
                     /locus_tag="QEL58_002320"
     CDS             1899..2672
                     /locus_tag="QEL58_002320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005413949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HDS1676781.1"
                     /translation="MSLLVDSHCHLDASAFGHDRAAVIDRAQAAGVRQQVVPAVTAAS
                     WPTLREVCRQAPGLYPAYGLHPMFLAEHQPGHLPLLREWIERERPCAIGECGLDFFVE
                     GLDAEAQQAYFIGQLELAREFDLPVIVHARRAVDAVIAAIRRIGGLRGVVHSFSGSPE
                     QAAQLHRQGFLLGLGGPLTYDRAQRLQRLVRQMPLEQLLLETDAPDQPDAGIRGQRNE
                     PARLAVIARHVAALRGMELDAVAQATTGNAQRLFALPAI"
     gene            complement(2702..3526)
                     /locus_tag="QEL58_002321"
     CDS             complement(2702..3526)
                     /locus_tag="QEL58_002321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010486808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA threonylcarbamoyladenosine dehydratase"
                     /protein_id="HDS1676782.1"
                     /translation="MNEQVKQRFAGIERLYGVGALERLQGSRVAVVGMGGVGSWVVEA
                     LARSAIGHLTLIDADDICVSNTNRQLPAMEGNYGRNKAEAMAERCRAINPDIEAEAVQ
                     AFLTVSNMAELLDRGFDLVIDACDSFRVKVETIAWCRRRKLPLLTVGAAGGRTDPTLV
                     RIRDVSRTEHDAMLALIRKKLRSEFNFPKNAKRYFGVPAVYSLENVKYPQADGSVCGI
                     RPNLGADAALKLDCGAGLGAATHITGAFAFAAVGKALEMLLEPKKVKAEAVEVSEV"
     gene            3607..4041
                     /locus_tag="QEL58_002322"
     CDS             3607..4041
                     /locus_tag="QEL58_002322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HDS1676783.1"
                     /translation="MNASPPRRLSTAHRYLFVLCLGLLIGLIATVMVGRALQARRDPF
                     PDSLMQVMQRQSQLLQQAQLQNRCSLADSVPRLQAIRLLSNDLDLAFPGLKDSAQFQQ
                     HASRLRGNLNAALAAPPSDCTALAQVVDTLQADCRACHQDFR"
     gene            4177..4671
                     /locus_tag="QEL58_002323"
     CDS             4177..4671
                     /locus_tag="QEL58_002323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine zipper 2TM domain-containing protein"
                     /protein_id="HDS1676784.1"
                     /translation="MKIQLIAASAIATLALAGCATSPGYGGGGYNNGYNNGGYGNNGG
                     YNQGRCADCGIVTRINTVQSGRTAPSATGAILGGIVGAVAGHEISDHTGGSRGNKNIA
                     AAAGAVGGALAGNQIQKNVTSDTYDISVRMDDGRTIVVNQRDLGGIRENTYVRVVNGK
                     VILR"
     gene            complement(4745..4954)
                     /locus_tag="QEL58_002324"
     CDS             complement(4745..4954)
                     /locus_tag="QEL58_002324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HDS1676785.1"
                     /translation="MSDRETGTVKWFNDAKGFGFISRENGEDVFVHFRAIQTQGFKSL
                     KEGQKVTFTVVQGQKGLQADAVQPT"
     gene            5191..5676
                     /locus_tag="QEL58_002325"
     CDS             5191..5676
                     /locus_tag="QEL58_002325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF456 domain-containing protein"
                     /protein_id="HDS1676786.1"
                     /translation="MGLSFILYLLAVIFVLVGIAGIILPALPGIPLVFIGLLLAAWAD
                     GFVHVGWPTLVVLGVLTLLSLLVDVLATVVGAQRVGASRKALWGTFVGSIVGLFFMPI
                     GLFAGPLVGALLGEYWHTRELGRSTRVGLATWLGILLGLALKLAVVIAMLGLFAFAWF
                     L"
     gene            5795..6949
                     /locus_tag="QEL58_002326"
     CDS             5795..6949
                     /locus_tag="QEL58_002326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase A"
                     /protein_id="HDS1676787.1"
                     /translation="MTLPPLLPRLAPLALALASAPLAAQEFVPSTDTSPAACAAITTD
                     AARLACYDRLFAHTPQATAAADAAAEAAAQARREERQTARVSQGEEKLRERVSDLFRP
                     AAADSALANAGRGSLLDSRWELAEDSKLGPFQLRAYKPVYLLPAFWTSDRNTTPHSPN
                     PANTVTTPQVLDSAELKFQISFKTKVAENLFGDNGDIWAGYTQSSRWQAYNGEDSRPF
                     RETNYEPEVMMVFRNGYSIGGWRGRMTGIALNHQSNGRADPLSRSWNRVMLNIGLDRE
                     NWALVLRPWYRIPETRSDDNNPDIEDYMGRGDATLIWNRNGHEVALMARHSLRTGSRS
                     HGALQLDYGFPISNLLRGHVQIFDGYGESLIDYNHKATYVGVGVSLLEWF"
     gene            6949..7290
                     /gene="arsC"
                     /locus_tag="QEL58_002327"
     CDS             6949..7290
                     /gene="arsC"
                     /locus_tag="QEL58_002327"
                     /EC_number="1.20.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037795.1"
                     /note="This arsenate reductase requires both glutathione
                     and glutaredoxin to convert arsenate to arsenite, after
                     which the efflux transporter formed by ArsA and ArsB can
                     extrude the arsenite from the cell, providing resistance;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenate reductase (glutaredoxin)"
                     /protein_id="HDS1676788.1"
                     /translation="MDVTIWHNPACSNSRGALKLIRDAGFDPVVVEYLGNPPDVAALR
                     EVLADSGLSARELVRSKEAQFAELGLEQADDATLLAAMAEHPRLINRPVVRTPKGTRL
                     CRPPETVLQIL"
     gene            complement(7364..7999)
                     /locus_tag="QEL58_002328"
     CDS             complement(7364..7999)
                     /locus_tag="QEL58_002328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HDS1676789.1"
                     /translation="MGTTLYGSTSTAALVVHWLLIELGIEHELVLLDFDAREHKAADY
                     LALNPAGVVPTLMIDGLVLTEAAAIALYLADRHPDAGLLPVVGTPQRGDAYRWMFWCA
                     NTLQPAYRAWFYPHEVAGEAHVRASREMARLRLEAAWQQVATHLQGHGPYLLGATPCV
                     VDYMLVMLMRWSRNMPTPSDTWPTLKAHATSMKTRPAFAEVYRREGITDWL"
     gene            complement(8057..8392)
                     /locus_tag="QEL58_002329"
     CDS             complement(8057..8392)
                     /locus_tag="QEL58_002329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014647725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676790.1"
                     /translation="MRLHRSVAAVFLLVLAGCSTAPSYEGADFSASAQCRMQCQASYR
                     SCMAQDRTGNSAFSCEQQVVPAPDKRCKDVANPELRRACELKAHDCTMRAPMMSCGEQ
                     RDTCMSSCG"
     gene            complement(8468..8863)
                     /locus_tag="QEL58_002330"
     CDS             complement(8468..8863)
                     /locus_tag="QEL58_002330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019337380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676791.1"
                     /translation="MLQCSRVFVLLIAALACSACGPRYFVEPPTHEAGRICASVCESQ
                     KATCDFHNRARAESDQRSCESEKSRVISRCSGIADDKQRHNCEGGNGAGNYCGSPALP
                     SCNAPYAQCLLSCGGTVNEVRTDTGVPVY"
     gene            complement(8980..10497)
                     /locus_tag="QEL58_002331"
     CDS             complement(8980..10497)
                     /locus_tag="QEL58_002331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003483539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate hydratase"
                     /protein_id="HDS1676792.1"
                     /translation="MTSIKQEDLIQSIADALQYISYYHPVDYIKNLAAAYEREESPAA
                     KEAMAQILINSRMCAEGHRPICQDTGIVTVFLEIGMDVRWDDATMGVEDMANEGVRRA
                     YMHPDNKLRASVLADPAGKRINTKDNTPGVVNVKVVPGNTVDVIVAAKGGGSEAKTKF
                     AMLNPSDSIVDWVLKTVPTMGAGWCPPGMLGIGIGGTAEKAMLLAKEALMEPIDITEL
                     QARGASNRIEELRLELYEKVNALGIGAQGLGGLTTVLDIKINDYPTHAANLPVAMIPN
                     CAATRHAHFTLDGSGPVMLDPPSLEDWPKLTYDASKGTRVDLDTITPEDVASWKPGQT
                     LLLNGKLLTGRDAAHKRMVDMLNKGEQLPVDLKGRFIYYVGPVDPVRDEVVGPAGPTT
                     ATRMDKFTRQVLEQTGLLGMVGKAERGPAAIEAIRDNKSAYLMAVGGSAYLVSKAIKA
                     AKVVGFADLGMEAIYEFTVQDMPVTVAVDSTGESVHKTGPREWQARIGKIPVVVE"
     gene            10616..11512
                     /locus_tag="QEL58_002332"
     CDS             10616..11512
                     /locus_tag="QEL58_002332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma-70 factor"
                     /protein_id="HDS1676793.1"
                     /translation="MNAETAFQTHRPRLMALAYRLLGSRADAEDVVQDAWLRWSGADP
                     ASVRDAEAWLVTATTRLGLDRLRAAKRERVHYVGPWLAEPLAVTLEPDPAPGPAQLHA
                     FADDVSVAFLTLLEQLGPEERAAFLLKEAFDHDYREIADLIGHSEANCRQLVHRARQR
                     LQAGRPRFNADPSQHRQLLARFMDASQRGDSEAIQALLHANALLVSDGGGVVTAAVRP
                     LLGAERIGRLFWAIARRGAVHPAQLGYVNGEPAILRFIGDRLHSVTTIEVVDGRIAQV
                     YSVLNPEKLPRVVTHGDAAASW"
     gene            11549..11998
                     /locus_tag="QEL58_002333"
     CDS             11549..11998
                     /locus_tag="QEL58_002333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005417569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HDS1676794.1"
                     /translation="MSDHASPRVPYTRLAAEAFKGLLATSKAVHDSSIDPTLMELLFL
                     RVSQLNGCGYCMDMHGTALRKGGIEPRKLDTLPAWHESRFFDARERAALGWAEALTRL
                     TDGAPSQAAFDALAPHFDEKGISDLSMGIAVINAWNRLGAGLLPPLP"
     gene            12362..14233
                     /locus_tag="QEL58_002334"
     CDS             12362..14233
                     /locus_tag="QEL58_002334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005911790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDS1676795.1"
                     /translation="MPATPTAGAAAAKKPSLRQRFKAMRNLPPFLRMVWQTSPALTLA
                     SLGLRLIRALLPVAMLYVGKLIIDSALHLSQHDAGFPPLGEALSSGVLNPLLGLLALE
                     FGLAIASDLLGRLVSYADALLSELFANVTSIRLMEHAATLDLEDFEDPDLQDKLDRAR
                     RQTMGRMNLMSQLFGQVQDAITVASLAIGLLVYAPWLILLLALALVPAFIGESHFNAA
                     GYSLNFQWTPERRQLDYLRQLGASVETAKEVKIYNLHRFLVERYRRLSVALFQANRAL
                     ARRRAFWGTLLAALGTLGYYTAYAYIAWRTVRGDFSIGDLTFLAGSFLRLRQLLEGLL
                     IGFSQVASQALYLDDLFSFFQIQPEIHSREGAVRVPQPIRQGFVFENVGFRYPDAEQW
                     AVRHLDFQLQAGEVLALVGENGAGKTTLVKLLARLYEPDEGRILLDGRDLRDYDLDDL
                     RANLGVIFQDFVRYNLSAGENIGVGQVEAMDDRARIADAARRGMAEEVIDDLPGGYDQ
                     LIGRRFKQGVDLSGGQWQKIAIARAWMRNAQVMILDEPTAALDARSEFEVFQRFRELA
                     DNRTAVLISHRFSSVRMADRILVLADGRIEASGTHEQLMAQGGRYAELFELQAAGYR"
     gene            14314..>15089
                     /locus_tag="QEL58_002335"
     CDS             14314..>15089
                     /locus_tag="QEL58_002335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007966679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin--NADP reductase"
                     /protein_id="HDS1676796.1"
                     /translation="MSSAFGAETVLEVRHWTDAYFSFTLTRDSGFRFENGQFVMIGLE
                     TEARPLLRAYSIASANWEEHLEFFSIKVQDGPLTSRLQHIKPGDKVLVGKKPTGTLLI
                     SDLHPGKNLYLLGTGTGMAPWLSVIKDPETYERFEKVILCHGVRYEKDLAYRDYFEKE
                     LREHEFLGEMIGDKLLYYPAVTREPFANQGRLTSLMESGEMQRTLGLPELSPENDRAM
                     ICGSPQMLADLRSVLDARGFQVSPRIGQPGHYVFERAFVE"
BASE COUNT         2422 a         5186 c         4877 g         2604 t
ORIGIN      
        1 cgctcagcgc gcgcgcttcc tccactgctc gcgtgactgg ccccagatct gcatcggctt
       61 gtcgttgtac ggcggcggca gctcccccat gcgcagcagc gtgctgccga gcttgcgcgc
      121 gaccgcccgc gagttgtcgt tgttctcggc aatggtgtgg atcacctcgt cccagcccag
      181 cgtatcgaag gcccagtcga tcgccgcaac tgccgcttcc ggcgcatagc cccggcccca
      241 gctggcatga cggatgcccc agccaacctc ggtaccgggc cagtcctgcg gttgccaggg
      301 ccccatccgc ccgatccatt cgccgctcga tttctcgatc acgctgaaca tcgagaagcc
      361 gaacagctgc caggcgccgg ccaggctgca gaagccgcgc caggccacag aaggcggctg
      421 cacgccgccc agggttcgca tcgtttcctc gtcggcgcag aacgccaggt aggcttcgta
      481 atcctcgcgc agcagggggc gcaggaccag ccgctcggtt tccaggcgca ggtcgaagat
      541 gctcatgccg actccatgtc gtgggaaggg gcgaccatga tggtcgatcc ctgacccgac
      601 gggatgaatt ccggcccgaa aaacgaaacg ggccggcatg gcgccggccc gttgcctact
      661 gcatgttgcg cctgggctta ctggcgcgtg gctgcggcag tggcacccgc ggctgcggtc
      721 tgcgtgacca gctggccatc gaccaccggc aggcgatcgc tggccggctt gttgtccatg
      781 cgcacggtct tctcggcgcc gtcatagcga taggtcacgt tgtagccctt gaccacatcg
      841 gtgttgccca tggcaatgcg gttacccggc ttgctggcca tgcgcatggt accggtggtg
      901 ccgtcctcgt tgcggtaggt cacgttgtaa ccggtaacgc ggctcgactc ggaggtggca
      961 gtctcggtgt ggcactggcg ctcggtgcgg ttgaccacgc ggccacccac gtggcgcttg
     1021 tcgatctggt tgccgatgaa gccaccggcc accgcgccgg ccgcggttgc ggccttcttg
     1081 ccgttgccgc cgccgacctg gttgccgagc aggccaccaa ccaccgcgcc gaccacggta
     1141 ccgccgacgt tgccgtcacg ctccggcagg cgctcctgca cggtcacgtc ctggcagact
     1201 tcgtgcggcg tctgggtggt ggaggtctcg cggaccggat cggtaccgat cacggtggca
     1261 taggccttct gcttctcggt gatcgggtcg accttcagca cgtcggcgta ctccaggccg
     1321 cgcggcgccg acgggtctag cgtgtcacca cgcgcaccgt cgtcaatggc gttgccatcg
     1381 gccaggcgcg attcggcatt gggggttccg gcgctgatgg aatcgggcga cgtgtcgcca
     1441 ctcttcatga aggcggcggt ggcgatgcca ccgaccagca gcgcgcccgc tgcgaccagg
     1501 acagttgtag ttgtgctttt catgacctgc tccttgcgga ccatccgcaa cgttctcggg
     1561 ccagattgca gcatgggctg cctgaacgga atctccacat ttcctgctca ttgctgtaac
     1621 ccattcagca tcgggaaatg ctgggcccgt ggtagcgttt gcatgttacc cacgaggatt
     1681 cccgccatgg ccaacgcgat gctgctgccg gtactgcaat gggcgcgccg gctgcgctac
     1741 cccaccctgt tcaagctcac ggccggcctg ttcgtgctga ccttgttcat tcccgacccg
     1801 atcccgttcg tcgatgagct ggtactgggc ttcggcacgc tgctgctggc caactggaaa
     1861 agccgcaacg ccaccccgcc gtcgccgctg gaacagcgtt gagtctgctg gtcgacagcc
     1921 actgccatct ggacgccagc gccttcggcc atgaccgcgc tgcggtgatc gatcgtgcgc
     1981 aggccgcggg cgtgcgccag caggtcgtgc ccgcggtgac cgccgccagc tggccaacgc
     2041 tgcgcgaggt ctgccggcag gcgccggggc tgtacccggc ctacggcctg cacccgatgt
     2101 tcctggccga gcaccagccc gggcacctgc cgctgctgcg cgagtggatc gaacgcgaac
     2161 gcccctgcgc gatcggcgaa tgcggcctgg atttcttcgt tgaggggctg gatgccgagg
     2221 cgcagcaggc ctatttcatt ggccagctgg agctggcccg cgagttcgat cttccggtga
     2281 tcgtgcatgc gcggcgcgcg gtggacgcgg tgattgccgc gatccgccgc atcggtggcc
     2341 tgcgcggcgt ggtgcacagc ttttccggca gcccggaaca ggccgcgcag ctgcacaggc
     2401 agggtttcct gctgggcctg ggcggcccgc tgacctacga tcgcgcgcag cgcctgcagc
     2461 gactggtccg tcagatgccg ctggagcagc tgctgctgga gaccgatgcg ccggaccagc
     2521 ctgatgccgg catccgcggc cagcgcaacg aaccggcacg gctggccgtc atcgcccgcc
     2581 atgtggcggc gttgcgtgga atggaactgg atgcggtggc acaggccacc accggaaatg
     2641 cgcagcggtt gttcgcgctg ccggcgattt aacggtgccg gccgctggcc ggcacggtcc
     2701 atcacacctc gctgacctcg accgcttcgg ccttcacctt cttgggctcc agcagcattt
     2761 ccagcgcctt gccgaccgcg gcgaaggcga acgcgccggt gatgtgcgtc gcggcgccca
     2821 ggcctgcgcc gcagtccagc ttcagtgccg catcggcgcc caggttcggg cggatgccgc
     2881 acacgctgcc atcggcctgc gggtacttca cgttttccaa tgaatacacc gccggcacgc
     2941 cgaagtagcg ctttgcattc ttcgggaaat tgaattcgct gcgcagcttc ttgcggatca
     3001 gcgccagcat cgcatcgtgc tcggtgcgcg aaacatcacg gatgcgcacc agggtcggat
     3061 cggtgcggcc gccggcggcg cccaccgtca gcagcggcag cttgcggcgg cggcaccagg
     3121 cgatggtttc gaccttgacc cggaagctgt cgcaggcgtc gatcaccaga tcgaaaccac
     3181 gatccagcag ttcggccatg ttggagacgg tcaggaaggc ctgcacggcc tcggcttcga
     3241 tgtccggatt gatcgcgcgg cagcgctcgg ccatcgcctc ggccttgttg cggccatagt
     3301 tgccttccat cgccggcagc tgccggttgg tgttggacac gcagatgtca tcggcgtcga
     3361 tcagggtcag gtggccgatc gccgaacggg ccagcgcctc caccacccat gagccgacac
     3421 cgcccatgcc caccaccgcc acgcggctgc cctgcaggcg ctcgagcgca cccacgccat
     3481 acagccgttc gatgccggcg aagcgttgtt tgacctgttc gttcatcggg ctattttaac
     3541 gtgcaggtgc cgacgcctgc agcgcgccgg catcgaaccc accgttgcac gcccggagag
     3601 cccgccatga acgccagccc gccccgtcga ctgagcaccg cccatcgcta cctgttcgta
     3661 ctgtgcctgg gcctgctgat cggcctgatc gccacggtga tggtcggacg cgccctgcag
     3721 gcccgccgcg acccgtttcc ggacagcctg atgcaggtga tgcagcggca atcgcagctg
     3781 ctgcagcagg cccagctgca gaaccgctgc agcctggccg acagcgtgcc gcggctgcag
     3841 gccattcgcc tgctgtccaa cgacctggac ctggcttttc ctgggctgaa ggacagtgcg
     3901 cagttccagc agcacgccag ccggctgcgc ggcaacctca acgctgcgct ggctgcgccc
     3961 cccagcgact gcacggccct ggcccaggtg gtggatacgc tgcaggccga ctgccgcgcc
     4021 tgccatcagg atttccgcta agcgcattca tcctgcagcc gggcaatgca cgcgcggttg
     4081 gcgccttgtt cacgttcgaa aggggacgat tcgtccaccc tgctgcatga cgcagtacca
     4141 cccaacgcac ccgccttcac ggccaggaga cgccccatga agatccagct catcgccgcc
     4201 agcgccatcg ctaccctcgc cctggctggc tgtgccacct cgcccggcta cggcggcggt
     4261 ggttacaaca atggctacaa caatggcggc tatggcaaca acggcggcta caaccagggc
     4321 cgctgcgccg actgcggcat cgtcacccgc atcaacaccg tgcagtccgg ccgcaccgcg
     4381 cccagcgcca ccggcgcgat cctcggcggc atcgtcggtg ccgtggccgg ccacgaaatc
     4441 tccgaccaca ccggtggcag ccgcgggaac aagaacatcg cggctgccgc aggcgcggtg
     4501 ggtggcgcac tggccggcaa ccagatccag aagaacgtca ccagcgacac ctacgacatc
     4561 agcgtgcgca tggacgatgg ccgcaccatc gtggtcaacc agcgtgacct cggcggcatc
     4621 cgcgagaaca cctacgtgcg cgtggtcaac ggcaaggtca tcctgcgctg acctgccccg
     4681 ggccgatggc aaggaaaaag gcccgcttgc gcgggccttt ttcatgtgac gttgtacagc
     4741 gcgatcaggt cggctgcacg gcgtcggcct gcaggccctt ctggccctgc acgacggtga
     4801 aggtgacctt ctggccttcc ttcaggctct tgaagccctg ggtctggatg gcgcggaagt
     4861 gcacgaacac gtcttcgccg ttttcacggc tgatgaagcc gaagcccttt gcatcgttga
     4921 accacttgac ggtaccggtc tcgcgatcag acatctcact aactccctgg tgactctctc
     4981 ttgttgttgg aaacgcctgt tgggcggctg acaagcaagg gggaagcgag gtgcatcgat
     5041 gcagcggatc gggaagatct tgcttcatca ggccacgatc cacggtgacc ttgccaagct
     5101 cagcgactgc aacttaaccc gcccaaaacg aaaaagcaac tggcaaaatc tttcactgtc
     5161 aaccccaaat cgaccaccat acgggacagc atgggactct cattcatctt atatctgcta
     5221 gcggtcattt ttgtccttgt cggcatcgcc ggaatcatcc ttccagccct tcccggcatc
     5281 ccgctggtgt tcatcggact gctgctggcg gcctgggctg atggcttcgt ccatgtcggc
     5341 tggccgaccc tggtcgtact gggcgtgctg accctgctct cgctgctggt ggacgtgctg
     5401 gccaccgtgg tcggtgcgca gcgggtcggg gccagccgaa aggcgctctg gggcactttc
     5461 gtcggcagca tcgtcggcct gttcttcatg cccatcggcc tgttcgccgg gccgctggtc
     5521 ggtgccctgc ttggcgagta ctggcacacc cgcgagctgg gacgctcgac cagggtcggc
     5581 ctcgccacct ggctcggcat cctgctcggc ctggcgctga agctggcggt ggtgatcgcc
     5641 atgctgggcc tgttcgcctt cgcctggttc ctgtgacggc gctgccttca cgccctgcgc
     5701 acgcggtggc cgtgcataaa ccgtgggggc tggccgcgat caggtgcagc cgccacactg
     5761 tgcgatcccc gtattcaccg aagggcctgt tggaatgacc ctccccccgt tgcttccccg
     5821 ccttgcgccg ctggcgctgg ccctggccag tgcaccgctg gcggcgcagg agttcgtgcc
     5881 cagcaccgac acctcgcccg ctgcctgcgc ggccatcacc accgatgcgg cccgcctggc
     5941 ctgctacgac cgcctgttcg cgcacacccc gcaggccacc gcggctgccg atgctgccgc
     6001 agaggccgcc gcgcaggcgc gccgcgaaga gcggcagacc gcgcgggtga gccagggcga
     6061 ggagaaactg cgcgaacgcg tcagcgacct gttccgcccg gcggcagcgg acagtgcgct
     6121 ggccaacgcc ggccgcggct cgctgctgga cagccgctgg gagctggccg aagactccaa
     6181 gctcggcccg ttccagctgc gggcctacaa gccggtgtac ctgctgcccg cgttctggac
     6241 cagcgaccgc aacaccacgc cgcattcgcc gaacccggcc aacacggtca ccacgccgca
     6301 ggtgctggac agtgccgaac tgaagttcca gatcagcttc aagaccaagg ttgccgagaa
     6361 cctgttcggc gacaacggcg acatctgggc cggctatacc cagagctcgc gctggcaggc
     6421 gtacaacggc gaggattcgc gcccgttccg cgaaaccaac tacgaacccg aagtgatgat
     6481 ggtgttccgc aacggctatt cgatcggtgg ctggcgcggg cgcatgaccg gcatcgcgct
     6541 gaaccaccag tccaacggcc gcgccgatcc gctgtcacgc agctggaacc gggtgatgct
     6601 gaacatcggc ctggaccgcg agaactgggc actggtgctg cgcccgtggt accgcattcc
     6661 ggagacccgc agcgacgaca acaacccgga catcgaggac tacatgggcc gcggcgacgc
     6721 gaccctgatc tggaaccgca acggccacga ggtcgcgctg atggcgcgcc attcgctgcg
     6781 caccggcagc cgctcgcatg gcgcgctgca gctggattac ggcttcccga tcagcaacct
     6841 gctgcgcggt catgtgcaga tcttcgatgg ctacggcgaa agcctgatcg actacaacca
     6901 caaggccacc tatgtcggcg tgggcgtgtc cctgctggag tggttctgat ggacgtgacg
     6961 atctggcaca acccggcctg cagtaattca cgcggcgcat tgaagctgat ccgcgatgcc
     7021 ggcttcgacc cggtggtggt cgagtacctg ggcaatccgc ccgatgtggc cgcgctgcgc
     7081 gaggtgctgg ccgattccgg attgagcgcg cgtgaactgg tgcgcagcaa ggaagcgcag
     7141 ttcgccgaac tcggcctgga acaagccgac gatgccaccc tgctcgctgc aatggccgag
     7201 cacccgcggt tgatcaaccg gccggtggtg cgcacgccca agggcacgcg gctgtgccgc
     7261 cctccggaaa cggtgctgca gatcctgtaa cccgaaaaag gggacggagg gaattaagtc
     7321 gtttgtgcac aagcgactta attccctccg tccccttttt cggttacagc cagtcggtga
     7381 tgccttcgcg gcgatagact tcggcgaacg ccggacgcgt cttcatcgag gtggcgtgcg
     7441 ccttgagcgt cggccaggtg tcactgggcg tgggcatgtt gcgcgaccag cgcatcagca
     7501 tcaccagcat gtagtcgacc acgcaaggcg ttgcccccaa cagataggga ccgtgcccct
     7561 gcaggtgcgt ggccacctgc tgccaggccg cttccaggcg cagccgtgcc atctcgcggc
     7621 tggcccgcac atgggcctcg ccggccactt cgtgcggata gaaccaggcc cgataggccg
     7681 gctgcagcgt attggcgcac cagaacatcc agcggtaggc gtcgccgcgc tggggcgtac
     7741 ccaccacagg cagcaggccg gcgtccggat ggcggtcggc caggtacagc gcgatcgccg
     7801 ccgcctcggt cagtaccagg ccatcgatca tcagcgtcgg caccacaccg gccggattca
     7861 gcgccaggta gtccgccgcc ttgtgctcgc gcgcgtcgaa atccagcagc accagttcgt
     7921 gctcgatgcc cagctcgatc aacagccagt gcacgaccag cgcggcggta ctggtcgaac
     7981 catacagcgt ggtgcccatg cggcggatcc tgtgcggttg gatcggccga ttatgcgccc
     8041 ctgcgcgggc cgttgctcag ccgcagctgc tcatgcaggt atcccgctgt tcaccacagg
     8101 acatcatcgg cgcgcgcatc gtacagtcgt gcgccttcag ctcgcaggca cggcgcagtt
     8161 cagggttggc gacgtccttg cagcgcttgt ccggcgcggg taccacctgc tgttcgcagc
     8221 tgaacgcact gttgccggtc ctgtcctgcg ccatgcaact gcgatagctg gcctggcact
     8281 gcatgcggca ctgcgcggag gcggagaaat ccgcaccttc ataggatggc gctgtgctgc
     8341 agccggccag gaccagcagg aacacagccg ctacggatcg atgcaggcgc atgggcacat
     8401 ccagtgcagg ggcaggccga ccctggcaga ccacggttgc tcgtgcaggc atcgatgcgc
     8461 gccccgctca gtacacggga acaccggtgt cggtgcggac ttcattcacg gtgccgccac
     8521 aggagagcag gcactgggcg tacggagcat tgcatgaagg aagtgccggg gaaccgcagt
     8581 agttgccggc accgttgccc ccttcgcagt tgtgccgctg cttgtcgtcg gcgataccac
     8641 tgcaacggct gatgacccgg ctcttctcgc tttcgcagct ccgctggtcc gactcggcac
     8701 gggcgcggtt gtggaagtcg cacgttgcct tctggctctc gcagaccgac gcgcagatcc
     8761 tcccagcttc atgggttggc ggctcgacga agtaacgcgg accacaggca ctgcacgcca
     8821 gcgcagcgat cagcaagacg aaaacacgcg aacactgcag cacgatggac tcccttccaa
     8881 tgcatcagac agcacgttaa cagagcaggc catccacggg caggctgcat gcaacaacgg
     8941 cgccacaagg gcgccgctgt ccagactgga acgggaggct tactccacca ccaccggaat
     9001 cttgccgatg cgggcctgcc actcgcgcgg gccggtcttg tgcaccgact cgccggtgga
     9061 atcgacggcg acggtcaccg gcatgtcctg cacggtgaac tcgtagatcg cttccatgcc
     9121 caggtcggcg aagccgacca ccttggccgc cttgatcgcc ttggacacca ggtaggccga
     9181 accaccgacg gccatcaggt aggccgactt gttgtcacgg atcgcttcga tcgcggccgg
     9241 gccgcgctcg gccttgccga ccatgcccag caggccggtc tgctccagca cctggcgggt
     9301 gaacttgtcc atgcgggtgg cggtggtcgg gccggccggg cctaccactt cgtcgcgcac
     9361 cggatcgacc ggaccgacgt agtagatgaa gcggcccttc aggtcgaccg gcagctgctc
     9421 gcccttgttg agcatgtcga ccatgcgctt gtgcgcggcg tcgcggccgg tcagcagctt
     9481 gccgttgagc agcagggtct ggcccggctt ccagctggcc acgtcttccg gcgtgatcgt
     9541 gtccaggtcc acgcgggtgc ccttggacgc gtcataagtc agcttcggcc agtcttccag
     9601 cgacggcggg tccagcatca ccgggccgct gccgtccagg gtgaagtgcg catggcgggt
     9661 ggccgcgcag ttcgggatca tcgccaccgg caggttggcc gcgtgggtcg ggtaatcgtt
     9721 gatcttgatg tcgagcacgg tggtcaggcc acccaggccc tgtgcgccga tgcccagcgc
     9781 gttgaccttc tcgtacagct ccaggcgcag ctcttcgatg cggttggacg caccccgggc
     9841 ctgcagctcg gtgatgtcga tcggctccat cagtgcttcc ttggccagca gcatcgcctt
     9901 ttcagcggtg ccaccgatgc cgatgcccag catgcccggc gggcaccagc cggcgcccat
     9961 ggtcggcacg gtcttcagca cccagtcgac gatggagtcg gacgggttga gcatggcgaa
    10021 cttggtcttg gcttccgaac caccgccctt ggcggcgacg atcacgtcga ccgtgttgcc
    10081 cggcaccacc ttgacgttga ccacgcccgg ggtgttgtcc ttggtgttga tgcgcttgcc
    10141 ggccggatca gccagcaccg aggcgcgcag cttgttgtcc gggtgcatgt aggcgcggcg
    10201 cacgccttca ttggccatgt cttccacgcc catggtggcg tcgtcccagc gcacgtccat
    10261 gccgatttcc aggaacacgg tgacgatacc ggtgtcctgg cagatcggac ggtggccttc
    10321 ggcgcacatc cgcgaattga tcaggatctg ggccatcgcc tccttcgcgg ccggcgactc
    10381 ctcgcgctcg taggcggcgg caaggttctt gatgtagtcg accgggtggt agtacgagat
    10441 gtactgcagc gcgtcggcga tggactggat gaggtcttcc tgcttgatcg atgtcacgac
    10501 ttgctcgctt gctggaggct ggcgggggta atccgcccat tttaccccct ctgccaccgg
    10561 gggtgccgtt gtacattcgt gtcacgtccc tgcccgccgc ggcgtccttg cccatatgaa
    10621 cgccgaaacc gccttccaga cccaccgtcc gcgcctgatg gccctggcct accgcctgct
    10681 cggcagccgc gccgacgccg aggacgtggt ccaggacgcc tggctgcgct ggtcgggcgc
    10741 cgacccggcc agcgtccgcg acgccgaggc ctggctggtc accgccacca cccggctcgg
    10801 cctggaccgg ctgcgcgcgg ccaagcgcga gcgcgtgcac tacgtcgggc cgtggctggc
    10861 tgaaccgctg gcggtcacgc tggagccgga cccggcgcct ggcccggccc agctgcatgc
    10921 gtttgccgat gatgtttcgg tggccttcct gaccctgctc gagcagctcg gccccgagga
    10981 gcgcgctgcg ttcctgctga aggaggcctt cgatcacgat taccgcgaga tcgccgacct
    11041 gatcggccac agcgaggcca actgccggca gctggtgcac cgcgcgcggc aacgcctgca
    11101 ggccgggcga ccgcgcttca atgccgaccc cagccagcac cggcagctgc tggcgcgctt
    11161 catggacgcc tcccagcgcg gcgacagcga ggcgatccag gccctgctgc acgccaacgc
    11221 actgctggtt tccgacggcg gcggcgtggt caccgcagcg gtgcgcccgc tgctgggcgc
    11281 cgaacgcatc ggccgcctgt tctgggctat cgcccgccgc ggcgccgtgc atccggcaca
    11341 gctgggttac gtcaatggcg aaccggcgat cctgcgcttc atcggtgacc gcctgcattc
    11401 ggtcaccacc atcgaggtgg tcgacggccg catcgcccag gtgtacagcg tgctgaatcc
    11461 ggaaaagctg ccacgggttg tcacgcacgg ggacgccgcg gcgtcctggt agtgaaaggc
    11521 ggccatcgtg gccgccgtgg agcccacgat gtccgaccat gcctctcccc gcgttcccta
    11581 cacccgcctg gccgccgagg ccttcaaggg cctgctggcc accagcaagg cggtgcatga
    11641 cagctcgatc gatccgaccc tgatggaact gctgttcctg cgcgtgtcgc agctcaacgg
    11701 ctgcggctac tgcatggaca tgcacggcac cgcgctgcgc aagggcggca tcgagccgcg
    11761 caagctggac accctgccgg catggcacga aagccgcttc ttcgatgccc gcgagcgtgc
    11821 cgcgctgggc tgggccgagg cgctgacccg gttgaccgac ggggcgccat cgcaggcggc
    11881 gttcgatgcg ctggcaccgc acttcgatga gaagggcatc agcgacctga gcatggggat
    11941 cgcggtgatc aatgcctgga accggctggg cgcgggtctg ctgccgccgc tgccgtaaca
    12001 gggagttctg ctggccgggc tgcgcccggc accggcagag gcaacagcca gagcagcgtc
    12061 aaaagctggt ttcccgagga atggcggggt ggatcaggcc acaggggccg ctgcaagtac
    12121 gtccatgtaa gctcggtcgc cgcatccatg cggctcacgc ccctgcgacc tgacccaccc
    12181 cgccttcgac agatttcctg ctgctgttgg taggtgtcga ccttggtcga cacggtaaat
    12241 ccacatcatg cgtggatgcg ggagggtcag agccctttgc gacgcaaagg gttctgaccc
    12301 cggcgcggcc acacggctgc actgaccccc tctgcacgca tcaggcgcgc acaatacgcg
    12361 catgcctgcc acccccaccg ctggcgccgc cgccgcgaag aaacccagcc tgcgccagcg
    12421 cttcaaggcg atgcgcaacc tgccgccgtt cctgcgcatg gtctggcaga ccagccccgc
    12481 gctcaccctg gccagcctcg gcctgcgcct gatccgtgcg ttgctgccgg tggcgatgct
    12541 gtacgtcggc aagctgatca tcgacagcgc cctgcacctg agccaacacg atgccggctt
    12601 cccgccgctg ggcgaggcgc tgtccagtgg cgtgctcaat ccactgctgg gcctgctggc
    12661 cctggaattc ggcctggcca tcgcctcgga cctgctcggc cgcctggtca gctatgccga
    12721 tgccctgctg tcggaactgt tcgccaacgt caccagcatc cggctgatgg aacacgccgc
    12781 gaccctggac ctggaggact tcgaggaccc ggacctgcag gacaagctgg accgcgcgcg
    12841 gcgccagacc atgggccgga tgaacctgat gagccagctg ttcggccagg tgcaggatgc
    12901 gatcaccgtg gccagcctgg ccatcggcct gctggtctac gcgccgtggc tgatcctgct
    12961 gctggcgctg gcgctggtgc cggccttcat cggcgaatcg cacttcaacg cggccggcta
    13021 cagcttgaac ttccaatgga cgcccgagcg ccgccagctc gactacctgc gccagcttgg
    13081 ggccagtgtg gaaacggcca aggaagtgaa gatctacaac ctgcaccgct tcctggtgga
    13141 acgctatcgg cgcctgtcgg tggcgctgtt ccaggccaac cgggcgctgg cccggcgccg
    13201 cgcgttctgg ggcacgctgc tggccgcgtt gggcacgctg ggctactaca ccgcctacgc
    13261 ctacatcgcc tggcgcacgg tccgtggcga tttctcgatc ggcgacctga ccttcctcgc
    13321 cggcagcttc ctgcgcctgc gccagctgct ggaaggcctg ctgatcgggt tctcgcaggt
    13381 agccagccag gcgctgtacc tggatgacct gttctcgttc ttccagatcc agccggagat
    13441 ccactcgcgc gaaggcgcag tgcgcgtgcc gcagccgatc cgccaggggt tcgtgttcga
    13501 gaacgtcggc ttccgctacc cggatgccga gcaatgggcg gtacgccacc tggatttcca
    13561 gctgcaggct ggcgaggtac tggccctggt cggcgagaac ggcgccggca agaccaccct
    13621 ggtcaagctg ctggcgcggc tgtacgaacc ggacgagggc cgcatcctgc tcgatggccg
    13681 cgacctgcgc gactacgacc tggacgacct gcgcgccaat ctcggggtga tcttccagga
    13741 cttcgtgcgc tacaacctca gcgccggcga gaacatcggc gtcggccagg tcgaggccat
    13801 ggacgatcgg gcacgcatcg ccgacgccgc gcgccgcggc atggccgagg aagtgatcga
    13861 cgacctgccc ggcggctacg accagctgat cgggcgccgc ttcaagcagg gcgtggacct
    13921 gtccggtggc cagtggcaga agatcgccat tgcccgtgcg tggatgcgca atgcgcaggt
    13981 gatgatcctg gatgagccaa cggcagcgct ggacgcacgc agcgagttcg aagtgttcca
    14041 gcggttcagg gaattggcgg ataatcgcac tgccgtactg atttcccacc ggttctcttc
    14101 ggtgcgcatg gccgatcgca tcctggtgct ggccgacggc cggatcgagg ccagcggcac
    14161 ccatgagcag ctgatggcac agggcggccg ctatgccgag ctgttcgagc tgcaggcggc
    14221 cggctaccgc tgagaacgcc tctcgttccg cctaatgaga acctgtctca tttgagatag
    14281 aatcaccccc gacgacttcc gatagatacg cccatgtcct ccgcttttgg cgccgaaacg
    14341 gtgcttgagg tccgtcactg gaccgatgcc tacttcagct tcaccctcac ccgcgacagc
    14401 ggttttcgct tcgagaacgg ccagttcgtg atgatcggcc tggaaaccga ggcgcggccg
    14461 ctgctgcgcg cgtactccat cgccagcgcc aactgggaag agcacctgga gttcttcagc
    14521 atcaaggtgc aggacggccc gctgacctcg cgcctgcagc acatcaagcc gggcgacaag
    14581 gtgctggtcg gcaagaagcc taccggcacc ctgctgatca gcgacctgca ccccggcaag
    14641 aacctgtacc tgctgggcac cggcaccggc atggcaccgt ggctgtcggt gatcaaggac
    14701 ccggagacct acgagcgctt cgagaaggtg atcctgtgcc atggcgtgcg ctacgaaaag
    14761 gatctggcct accgcgatta tttcgagaag gaactgcgtg agcacgagtt cctgggcgag
    14821 atgatcggcg acaagctgct gtactacccg gccgtcaccc gcgagccgtt cgccaaccag
    14881 ggccgcctga cctcgctgat ggaaagcggc gagatgcagc gcaccctcgg cctgccggaa
    14941 ctgagcccgg agaacgaccg cgcgatgatc tgcggcagcc cgcagatgct ggccgacctg
    15001 cgcagcgtgc tggacgcccg tggcttccag gtttcgccac gtatcggcca accgggccac
    15061 tacgtattcg aacgcgcctt cgtcgagaa
//
LOCUS       DAOKIP010000094        14743 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.094,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000094 DAOKIP010000000
VERSION     DAOKIP010000094.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 14743)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14743)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14743
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.094"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            18..503
                     /locus_tag="QEL58_002336"
     CDS             18..503
                     /locus_tag="QEL58_002336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005419852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF962 domain-containing protein"
                     /protein_id="HDS1676797.1"
                     /translation="MQTTTQLARPIDRYFASYSDDHRNVINQRIHVVAVPAILWSVVA
                     LLWCLPPLITWFQYGIWSAFAMFSAWCFYNKLSRPLGIGMLIQFFVFGCLCRLLEAEI
                     GLHNLFWLAVGVFVVAWIAQFIGHKFEGRKPSFLTDLTYLLIGPAWVMAKFYRRLDWR
                     Y"
     gene            837..3665
                     /locus_tag="QEL58_002337"
     CDS             837..3665
                     /locus_tag="QEL58_002337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019302198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="monovalent cation/H+ antiporter subunit A"
                     /protein_id="HDS1676798.1"
                     /translation="MLPSLPLLLALPFLMAAAVAAFPRSSRSTAAWLAALAPLGGLAI
                     LGWLTPSVLDGQLVRTMVPWLPQIGLDFTLRLDGLAWMFAGLVLGIGALVVLYARYYL
                     SQQDSAHRFYCYLLLFMGAMLGMVLSGNLLLLMIFWEMTSISSFLLIGFWSHRQDARE
                     GARMALVITGGGGLALLGGVLLIGRIVGSFDLDVVLAAGEQIRASALYPYALFLVLAG
                     IFTKSAQFPFHFWLPHAMAAPTPVSAYLHSATMVKAGVFLLARLHPALAGSDLFFYTV
                     SGIGALTLLIGAWNAIFQHDLKGLLAYSTISHLGLITLLFGLSTPMAVVAGVFHILNH
                     ATFKASLFMAAGIIDHETGTRDMRKLGGLRRLMPFTSALAIIASLAMAGIPLLNGFLS
                     KEMLFAEAITAGGPGIMRTAVSIAALLAGVFGVAYSLRFVHDTFFGPGPHDLDRVPHE
                     PPRWMKVPVELLVVICIAVGVAPALTVAPVLHAAAASILGPAMPEYSLAVWHGFNLPL
                     AMSAIGVVGGVALYFGLRKLINLHGVTNVSTGRNVFHAQLDAVSALAMRLTNGIANGS
                     LQRMLLGLVLVAIVVAAAPFVANPASPNWTAPQPIPLLGWALWLVMMACAVATLRVYK
                     QRLLAVLLVGGVGLMVALTFVFLSAPDLALTQLLVEMVTLVLMLLGMNYLPAQSGPER
                     PRWRKRRDAVIAIVAGAGLGALAYSAMTLPPNTMAGELLGRALPEAYGQNVVNVILVD
                     FRGFDTFGEITVFGIAALVVHALLRRTRMAPEQIMPGPPIKLPVPADLAQIMFPLTLT
                     VSIFLFLRGHNAPGGGFIAGLVLAVPLLIQYVIQGTASVESRFGFDYIRCIGMGLLIA
                     LLSGSASMLFGVPFLTSGHLDLHLPLIGDVPLASAIGFDIGVYLVVFGGAMLMLSMMG
                     TIKPSRTRIARKGEIDLQRRSARTGEMH"
     gene            3665..4057
                     /locus_tag="QEL58_002338"
     CDS             3665..4057
                     /locus_tag="QEL58_002338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012481447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter subunit C"
                     /protein_id="HDS1676799.1"
                     /translation="MELALATAIGVLTAIGIYLLLRARSFDVILGMTFLSYATNLLIF
                     AGGRVVLGKAPVLQEGVDSHLGNYTDPLPQALVLTAIVIAFAMTAVSIVLAMRSRSDN
                     HSDHVDAHEPDDDLQDESMPPRQGEDRA"
     gene            4054..5589
                     /locus_tag="QEL58_002339"
     CDS             4054..5589
                     /locus_tag="QEL58_002339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017161271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="monovalent cation/H+ antiporter subunit D"
                     /protein_id="HDS1676800.1"
                     /translation="MNHLVILPILIPLLGAALSLFVEHRRYGPRVQRAVAWTSLSALA
                     LAVGLLFATTASGEINVYLLGDWPSRLGIALVADRLSAWMLLTTLLLAIPCLLHACSG
                     WDRRAPHFHALFQFQLVGLNGAFLTGDIFNLFVFFEVMLIASYGLLLSGGRGLRMRIG
                     LHYVVFNVTASTLFLIALGLLYASLGSLNMAELSQRIAEVPPAQLTLVKATMGLLLLV
                     FCAKAALMPLYLWLPEAYSRAPAAVAALFAIMTKVGLYAVLRIQMLWFGDDAGAMAGY
                     GRDWLLWAGVATLVLGGLGALAATRLRVLISYLVIVSAATLFIAFAVGTPQVLSAGLY
                     YLPHSSFVAAALFLIADLIRRRRGGASDRKEVVAPMPGKETPAVLFLIGAVSVAGLPP
                     LSGFLAKAALLAGMPAQYTGPVWTAVLVSSLLVIMGLTRGGIRLFWRVPPVDPETPPP
                     RKARLRRVELYAACILLAYGIGMTLAAAPLMRYTDATAAQLLHPSEYVQQLRATTPEI
                     RQP"
     gene            5586..6092
                     /locus_tag="QEL58_002340"
     CDS             5586..6092
                     /locus_tag="QEL58_002340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006399169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter subunit E"
                     /protein_id="HDS1676801.1"
                     /translation="MTAQRSLFRRIIPSPMLSIMVVAFWLLMSDSFTLGQIVLGLVLG
                     VVVPLFAARLDREFARIGTLRPLPKLLCVTLWDILMSNIRVAIQVLGPEKNIHPGFIW
                     LPLDIANIHGIAALTSMITLTPGTVSAVLSDDRRFLMVHVLHLEDPQDLIDTIKRRYE
                     APLMEIFP"
     gene            6089..6373
                     /locus_tag="QEL58_002341"
     CDS             6089..6373
                     /locus_tag="QEL58_002341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014501684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="K+/H+ antiporter subunit F"
                     /protein_id="HDS1676802.1"
                     /translation="MTGFQIIQTTLVVCMHVVGLAMLLATWRLLRGPTVPDRILALDT
                     LSVTAIAELMLFGMYLNSAIYFEAALVIAMLGFGSTVVLSKFVLRRDIVE"
     gene            6370..6759
                     /locus_tag="QEL58_002342"
     CDS             6370..6759
                     /locus_tag="QEL58_002342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012481450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter subunit G"
                     /protein_id="HDS1676803.1"
                     /translation="MITVIQIGLSILLLFGCFFILVGALGLVKLSTFFKRLHAPTKAS
                     TLGVGCVLVCSVCYHIFLGQDPQPRELLITVFLFITAPISAHMMAKAALSLLMEKRPS
                     LPGNEPAAEEQLPPPEPVREEEHAQNR"
     gene            complement(6849..7814)
                     /locus_tag="QEL58_002343"
     CDS             complement(6849..7814)
                     /locus_tag="QEL58_002343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010482674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:calcium antiporter"
                     /protein_id="HDS1676804.1"
                     /translation="MIAIAIAWFLLGLLLLALGGDSIVKAVSGLAQRFGASPFTAGLL
                     LLGVTTSLPELAVNARALAVGQPELALGNAVGSSIANLGLTLALAAIAAPLLLRARLQ
                     TVLWWSLLAAAALLILFGLDGRLVRWEGGVLVAGFIVMQVVLLRRGRRESAEVQVAIA
                     ESALSRTSLPLNVLRVLIAALTLYWGARLVVGAAADFGTALGWTPLLVGLLPVAIGTA
                     LPEVAAAIAAARRGHGDMVLGHVLGSSAVNLLLVIGAMAMLQPLALPASFVRLELPAL
                     LAFALVLYPMLRGDLKINRGEGAILLVAFVGWLMLEVLLVGAPAL"
     gene            complement(7888..8544)
                     /locus_tag="QEL58_002344"
     CDS             complement(7888..8544)
                     /locus_tag="QEL58_002344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012481452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676805.1"
                     /translation="MKHLPIAGLMLLSLTACNGGSDKQGAAGSGSDTPAETASATGPA
                     QSADPDLAARPANDLRADSPARLDGFAGVKLGATIAEVRSGFGTPLQGLGTDAAGKPL
                     PADDSNDGCYFLRPQDAEDPRLMIEGRKLVRYDVRSAAIIAPGGGKVGMTLGELQVLY
                     PERADVGPDKYDEKAQHLRVRPAQEGDAVIDFALGADGKVGAWRVGKTPQVDYVEGCG
                     "
     gene            8670..9230
                     /locus_tag="QEL58_002345"
     CDS             8670..9230
                     /locus_tag="QEL58_002345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005411338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676806.1"
                     /translation="MQPRKTDLARTALQAHRAPLDMRQRRLLILCDGQRTVAELTDLL
                     GQEAPAMVIQLVQSGYLDTGPTTAPLPAPAAPSARPATPPAPTPITASAPAPAPTAPV
                     ERRRSLVAARIYVLGILEMQRHPQAAALFRDLQQARAEDEVLQRLQSAMQMLPGLTSD
                     GYCQRVRQRLLEALPLEHCDAFAEAA"
     gene            complement(9311..10618)
                     /locus_tag="QEL58_002346"
     CDS             complement(9311..10618)
                     /locus_tag="QEL58_002346"
                     /EC_number="1.13.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005419876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homogentisate 1,2-dioxygenase"
                     /protein_id="HDS1676807.1"
                     /translation="MSTALTARGYQSGFGNEFATEAVAGALPVGQNSPQKVAHGLYAE
                     QLTGTAFTAPRGSNRRSWLYRIRPAVTHGEFTPFAQSQLQCDFGAQPASPNQLRWSPL
                     PLPELPTDFVEGLYTMGGNGSPDAHAGVGIHLYAANRDMVGRYFYDADGELLIVPQLG
                     ALRLLTELGVIEIEPQQIAVIPRGVRFRVELPDGPSRGYICENYGALLKLPDLGPIGS
                     NGLANPRDFETPHAAFEDVDGDFELIAKFDGRLWRAPIDHSPLDVVAWHGNYAPYRYD
                     LRRFNTIGSISYDHPDPSIFLVLHSPSDTPGTSNMDFAIFPPRWLVAQNTFRPPWFHR
                     NIASEFMGLVHGAYDAKAEGFVPGGASLHNCMSGHGPDAPTFDKASNADLSKADVIKD
                     TMAFMFETRAVIRPTAQALAAGHRQGDYQQCWNGLRNNFRPSR"
     gene            complement(10704..11816)
                     /gene="hppD"
                     /locus_tag="QEL58_002347"
     CDS             complement(10704..11816)
                     /gene="hppD"
                     /locus_tag="QEL58_002347"
                     /EC_number="1.13.11.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylpyruvate dioxygenase"
                     /protein_id="HDS1676808.1"
                     /translation="MNTAVPTASHPNPGMQVTTFENPMGIDGFEFVEFAAPAGRGQEL
                     HEYFRKMGFSAVLKHKQRPITVYRQGDVNFLVNEDPDSFAADFAEKHGPCACGFAIRF
                     KKPGQEVYQTALGNGAEAIAFKPDSKAVNAPVIKGIGDCMLYLVDRYGSAGSIFDGDY
                     EQIAGTDLHPVGFGLTFIDHLTHNLYFGNMQQWSDYYERLFNFREIRYFDIKGLKTGL
                     VSKAMTAPDGIVRIPLNESSDPKSQINEYLDAYKGEGIQHIACFTENIYETVEAMRAQ
                     GVDFLDTPETYFDVIDQRVPNHGEDVARLAKNKILIDADPETHQRKLLQIFTQNCIGP
                     IFFEIIQRKGNEGFGEGNFTALFESIERDQIRRGVL"
     gene            11946..12437
                     /locus_tag="QEL58_002348"
     CDS             11946..12437
                     /locus_tag="QEL58_002348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012512327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HDS1676809.1"
                     /translation="MSPEPASTRLRASHVLLDLEQFLPYRLSVLSNRVSGNIAKLYGD
                     RYGLAIPEWRVITILALYPGSSASEVSDRTAMDKVAVSRAVARLLERGFIKRETHGDD
                     RRRSVLALSAAGFEVYETIAPMVIEITRKLMSVLSDEEEQVLEKLILRLAGDGLERMG
                     EGV"
     gene            12817..13872
                     /locus_tag="QEL58_002349"
     CDS             12817..13872
                     /locus_tag="QEL58_002349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019338592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1016 family protein"
                     /protein_id="HDS1676810.1"
                     /translation="MDDTCSTLPHGQELLADLRDLICEARSRMHRSINAGLTLLYWRI
                     GRRIHVDQMAGQRARYGELAFIRIAKALSAEFGTSFGEKSLRRMVQFSTAFADEQIVV
                     SLIRQLSWTHFIALIPLADPLKRDFYAQMAATEGWSVRTLRQRIDSMLYERTALSSQP
                     EQTIADELAALRSNQPLSPGLVLRDPYVLDFLGLKDSWDEQDLESAILREMQGFLLEL
                     GTGFSFVARQKRIQIDGDDFHLDLLFYNRRLRRLIAIELKIGEFKPAYKGQMELYLRW
                     LDRYEREDGEQEPLGIILCTGKKAGQIELLELDRSGIHVAEYLTTLPSREVLKQRLQT
                     AMERARQQLQTAPPSPR"
     gene            complement(13882..>14743)
                     /locus_tag="QEL58_002350"
     CDS             complement(13882..>14743)
                     /locus_tag="QEL58_002350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005419887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676811.1"
                     /translation="EWQGHGVRAIELSTFIQGVLPFLQPGERGETAPARLPVRHVLGD
                     DSRWGLDDVSEPKSLAWYLASDERATAGSKDVAEAHLVGALGLAWMQEGRSRPGFLRA
                     MGQDSLAARVTMLGYPPANELALYSVTAHGQPQIWCVHGRRRMRPLVAPWLSVPLLTA
                     YGVPAPVAWPTSFPPVEAVAEVLATARLGRALPEVDLGKVVAKIAEDAASEAWQPVSL
                     LQLNTWSPRWHFFLGTFVGLPSLLLVAAALALPGAVEAATVAASLGFAGGAIAALAVP
                     WIHARRKHLS"
BASE COUNT         2249 a         5008 c         4900 g         2586 t
ORIGIN      
        1 cgaggaagca acgcagcatg cagaccacca cccagcttgc gcggccgatc gaccgctact
       61 tcgccagcta ctccgacgac caccgcaatg tgatcaacca gcgcatccat gtggtggcgg
      121 tgccggccat cctctggtcg gtagtggccc tgctgtggtg cctgccgcca ctgattacct
      181 ggttccagta cggcatctgg tcggcgttcg cgatgttcag cgcctggtgc ttctacaaca
      241 agctgtcgcg cccgctgggc atcggcatgc tcatccagtt cttcgtgttc ggctgcttgt
      301 gccgcctgct ggaggccgag atcggcctgc acaacctgtt ctggctggcg gtgggcgtgt
      361 tcgtggtggc ctggatcgcg cagttcatcg gccacaagtt cgagggccgc aagcccagct
      421 tcctgaccga cctgacctac ctgctgatcg gcccggcctg ggtgatggcc aagttctacc
      481 gcaggctcga ctggcgctac tgaggggccg gtggccggcg gcggtcgtcg tttcctgaac
      541 gggcgggttc cgtcacccgc actcgacggc ggccctgcca gcctgcgccg gtgaaccgct
      601 ccccacgtcc cgcccgtcga cggcagcccc tgtgcgacag ggcctgcggt ctccctgcgc
      661 gggcgtaggg tgtcccccga gggcaaccgg ggaggtgatg caggaacgtg atgctgcgcc
      721 gcaaaaaaga tgaatcagcg gacgttacat gcaattgatc gcagttcgat gggtttcggc
      781 gacatttcgc agcctgttat cctccctgac ctgctcgtga atcatggatt ccctgcatgc
      841 tccccagcct gcccctgctg ctggccctgc ccttcctgat ggcagcggcc gttgcggcct
      901 tcccccgtag ttcgcgctcg actgctgcct ggctggcggc gctggcgccg ttgggcgggc
      961 tggccatcct cggctggctg accccgtccg tgctcgatgg ccagctggtg cgcacgatgg
     1021 tgccctggct gccgcagatc ggcctggact tcaccctgcg cctggatggg ctggcctgga
     1081 tgttcgccgg gctggtgctg ggcatcggcg cgctggtggt gctgtatgcg cgctactacc
     1141 tgagccagca ggacagcgcg caccgcttct actgctacct gctgctgttc atgggcgcca
     1201 tgctgggcat ggtgctgtcg ggcaacctgc tgttgctgat gatcttctgg gaaatgacca
     1261 gcatcagctc gttcctgctg atcggcttct ggtcgcaccg ccaggacgcc cgcgagggcg
     1321 cgcgcatggc gctggtgatc accggcggcg gtggcctggc cctgctcggt ggcgtgctgc
     1381 tgatcggccg catcgtcggc agcttcgacc tggacgtggt gctggctgcc ggcgagcaga
     1441 tccgcgccag cgcgctgtac ccgtacgcgc tgttcctggt gctggccggc atcttcacca
     1501 agagtgcgca gttcccgttc cacttctggc tgccgcacgc gatggcggca ccgaccccgg
     1561 tctcggccta cctgcactcg gccaccatgg tgaaggccgg cgtgttcctg ctggcgcgcc
     1621 tgcacccggc gctggccggc agcgacctgt tcttctacac ggtcagcggc atcggcgcac
     1681 tgaccctgct gatcggcgcc tggaacgcga tcttccagca cgacctgaag ggcctgctgg
     1741 cctattcgac gatctcgcac ctgggcctga tcaccctgct gttcggcctg tccacgccaa
     1801 tggcggtggt cgccggcgtg ttccacatcc tcaaccacgc caccttcaag gcctcgctgt
     1861 tcatggccgc cggcatcatc gaccacgaga ccggcacccg tgacatgcgc aagctgggcg
     1921 ggctgcgcag gctgatgccg ttcaccagtg cgctggcgat catcgcctcg ctggcgatgg
     1981 ccggcattcc gctgctcaac ggcttcctgt ccaaggaaat gctgttcgcc gaagcgatca
     2041 ccgcgggcgg cccgggcatc atgcgtacgg cggtgtcgat cgccgcgctg ctggccggcg
     2101 tgttcggcgt ggcctacagc ctgcgcttcg tgcacgacac cttcttcggc cccggcccgc
     2161 acgacctgga ccgcgtgccg cacgagccgc cgcgctggat gaaggtgccg gtggagttgc
     2221 tggtggtgat ctgcatcgcg gtgggcgtgg ctccggcact gaccgtggca ccggtgctgc
     2281 acgccgccgc tgcctcgatt ctcggcccgg ccatgcccga gtacagcctg gcggtgtggc
     2341 acggcttcaa cctgccgctg gcgatgagcg cgatcggcgt ggtcggtggc gtggcgctgt
     2401 acttcggcct gcgcaagctg atcaacctgc acggcgtgac caacgtcagc accggtcgca
     2461 acgtgttcca tgcacagctg gatgcggtgt ccgcgctggc catgcgcctg accaacggca
     2521 tcgccaacgg cagcctgcag cgcatgctgc tgggcctggt gctggtggcg atcgtggtcg
     2581 ctgcggcgcc gttcgtggcc aatccggcct cgccgaactg gaccgcaccg cagccgatcc
     2641 cgctgctggg ctgggcgctg tggctggtga tgatggcctg tgcagtggcc accctgcgcg
     2701 tctacaagca gcgcctgctg gcggtgctgc tggtcggcgg cgtcggcctg atggtggcgc
     2761 tgaccttcgt gttcctgtcc gcgcccgacc tggccctgac ccagctgctg gtggagatgg
     2821 tcaccctggt gctgatgctg ctgggcatga actacctgcc cgcacagtcc gggccggagc
     2881 ggccgcgctg gcgcaagcgc cgcgatgcgg tgatcgcgat cgtcgccggt gccggcctcg
     2941 gcgcgctggc ctattcggcg atgacgctgc cgccgaacac catggccggc gaactgctgg
     3001 gccgggcgct gcccgaggcg tatgggcaga acgtggtcaa cgtgatcctg gtcgacttcc
     3061 gcggcttcga taccttcggc gagatcaccg tgttcggcat cgccgcgctg gtggtgcatg
     3121 cgctgctgcg gcgcacgcgg atggcaccgg agcagatcat gcccggcccg ccgatcaagc
     3181 tgccggtgcc ggccgacctg gcccagatca tgttcccgct gaccctgacc gtgtcgatct
     3241 tcctgttcct gcgcggccac aacgcgccgg gcggtggctt cattgccggc ctggtgctgg
     3301 cggtgccgct gctgatccag tacgtgatcc agggcaccgc gtcggtggaa tcacgcttcg
     3361 gcttcgacta catccgctgc atcggcatgg gcctgctgat cgccctgctc agtggcagtg
     3421 cctcgatgct gttcggcgtg ccgttcctga ccagcggcca cctcgatctg cacctgccgc
     3481 tgatcggcga cgtaccgctg gccagcgcga tcggcttcga catcggcgtc tacctggtgg
     3541 tgttcggcgg cgccatgctg atgctgtcga tgatgggcac gatcaagcca tcgcgcaccc
     3601 gtatcgcccg caagggcgag atcgacctgc aacgccgttc ggcacgcacc ggggagatgc
     3661 actgatggaa ctggccctgg ccaccgcgat cggcgtgctg accgccatcg gcatctacct
     3721 gctgctgcgt gcgcgcagct tcgatgtgat cctcggcatg accttcctgt cctatgcgac
     3781 caacctgctg atcttcgcgg gtggccgcgt ggtgctgggc aaggcgccgg tactgcagga
     3841 gggcgtggac agccacctcg gcaactacac cgacccgctg ccgcaggcac tggtgctcac
     3901 tgccatcgtc atcgcgtttg cgatgaccgc ggtgagcatc gtgctggcca tgcgcagccg
     3961 cagcgacaac cacagcgacc acgtggacgc ccacgagccg gatgacgacc tgcaggacga
     4021 gagcatgccg ccgcgccagg gtgaggaccg cgcatgaacc atctggtgat cctgccgatc
     4081 ctgattccgc tgttgggtgc tgcgctgtcg ctgttcgtcg aacaccgccg ctatggcccc
     4141 agggtgcagc gcgcggtggc ctggacctcg ctgtcggcgc tggccctggc ggtgggcttg
     4201 ctgttcgcca ccaccgccag cggtgagatc aacgtctacc tgctgggcga ctggccgtca
     4261 cggctgggca tcgcactggt ggccgaccgg ctgtcggcgt ggatgctgct gaccaccctg
     4321 ctgctggcca tcccctgcct gctgcatgcc tgttcgggct gggaccgccg tgcgccgcac
     4381 ttccatgcgc tgttccagtt ccagctggtc ggcctcaacg gcgccttcct gaccggcgac
     4441 atcttcaacc tgttcgtgtt cttcgaggtg atgctgatcg cctcctacgg cctgctgctc
     4501 agcggcggcc gcggcctgcg catgcgcatc ggcctgcact acgtggtgtt caacgtcacc
     4561 gcctcgaccc tgttcctgat cgcgctgggc ctgctgtatg cctcgctggg ctcgttgaac
     4621 atggccgagc tgtcgcagcg catcgccgag gtgccgccgg cgcagctgac cctggtcaag
     4681 gcgacgatgg gcttgttgct gctggtgttc tgcgccaagg ccgcgctgat gccgctctac
     4741 ctgtggctgc cggaagccta ttcgcgtgca ccagcggcgg tggccgcgct gttcgcgatc
     4801 atgaccaagg tcggcctgta cgcggtgctg cgcatccaga tgctgtggtt cggcgacgac
     4861 gccggtgcga tggccggcta cggccgcgac tggctgctgt gggccggcgt ggcgacgctg
     4921 gtgctcggtg gcctcggtgc attggccgcg acccgcctgc gcgtgctgat ctcgtacctg
     4981 gtgatcgtat cggcggccac gctgttcatc gccttcgccg tgggtacgcc acaggtgctc
     5041 tccgctggcc tgtactacct gccgcacagc agcttcgtgg ccgccgcgct gttcctgatt
     5101 gccgacctga tccgccgccg ccgcggcggc gccagcgacc gcaaggaagt ggtcgcgccg
     5161 atgccgggca aggaaacccc ggcggtgctg ttcctgatcg gcgcggtatc ggtggccggc
     5221 ctgccgccgc tgtccggctt cctggccaag gccgcgctgc tggccggcat gccggcacag
     5281 tacaccggcc cggtatggac cgcggtgctg gtcagcagcc tgctggtgat catgggcctg
     5341 acccgtggcg gcatccgcct gttctggcgc gtgccgccgg tcgatccgga gacgccgccg
     5401 ccacgcaagg cacggctgcg ccgggtcgag ctgtatgccg cctgcatcct gctggcctac
     5461 ggcatcggca tgaccctggc cgccgcaccg ctgatgcgct acaccgacgc cactgccgca
     5521 cagctgctgc accccagcga gtacgtgcag cagctgcgtg cgaccacgcc ggagatccgc
     5581 cagccatgac cgcccagcgc tccctgttcc gccgcatcat tccctcgccg atgctcagca
     5641 tcatggtggt ggcgttctgg ctgctgatgt ccgacagctt caccctcggc cagatcgtgc
     5701 tggggctggt gctgggcgtg gtggtgcccc tgttcgccgc acgcctggac cgcgagttcg
     5761 cccgcatcgg cacgttgcgg ccgctgccga aactgctgtg cgtgaccctg tgggacatcc
     5821 tgatgtccaa catccgcgtg gcgatccagg tgctgggccc ggagaagaac atccacccgg
     5881 gcttcatctg gctgccgctg gacatcgcca acatccacgg gatcgccgca ctgaccagca
     5941 tgatcacgct gaccccgggc acggtctcgg ccgtgctcag cgacgaccgc aggttcctga
     6001 tggtgcatgt gctgcacctg gaggatccgc aggacctgat cgatacgatc aagcgacgtt
     6061 acgaagcccc gttgatggag atcttcccat gactggattc cagatcatcc agaccacgct
     6121 ggtggtgtgc atgcacgtgg tcggcctggc catgctgctg gccacctggc gcctgctgcg
     6181 cggcccgacc gtgcccgacc gcatcctggc gctggacacg ctgtcggtga ccgccatcgc
     6241 cgagctgatg ctgttcggca tgtacctgaa ctccgcgatc tacttcgaag ccgcgctggt
     6301 catcgccatg ctcggcttcg gcagcaccgt ggtgctgagc aagttcgtgc tgcgccggga
     6361 catcgtcgaa tgatcaccgt gatccagatc ggcctgtcga tcctgctgct gttcggctgc
     6421 ttcttcatcc tggtcggggc actgggcctg gtgaagctgt ccacgttctt caagcgcctg
     6481 catgccccca ccaaggccag cacgctgggc gtgggctgcg tgctggtgtg ttcggtgtgc
     6541 taccacatct tcctcggcca ggacccgcag ccgcgtgagc tgctgatcac cgtgttcctg
     6601 ttcatcaccg cgccgatcag cgcgcacatg atggccaagg ccgcgctgtc gctgctgatg
     6661 gagaagcgtc ccagcctgcc gggcaacgaa ccggccgccg aggaacagct gccgccgccg
     6721 gaaccggtgc gggaagaaga gcacgcgcag aatcggtagt gccggccgct ggccggcagg
     6781 gtgacgcccg gtgggtgccg accgttggtc ggcacagaca atcaaccgca tccacgcatg
     6841 gcgtggatct acagggccgg tgcgcccacc agcagcactt ccagcatcag ccagccgacg
     6901 aacgcaacca gcaggatcgc gccttcgccg cggttgatct tcaggtcacc acgcagcatc
     6961 gggtacagca ccagcgcgaa cgccagcagc gccggcagtt ccaggcgcac gaacgaggcc
     7021 ggcagcgcca gcggctgcag catggccatc gcgccgatca ccagcagcag gttgaccgcg
     7081 ctggacccca gcacatgccc cagcaccatg tcgccatgac cgcgacgcgc ggcggcgatg
     7141 gcggcagcca cctccggaag cgcggttccg atggccaccg gcagcaggcc gaccagcaac
     7201 ggcgtccagc ccagcgcggt tccgaaatca gccgccgcac cgaccaccag gcgtgcgccc
     7261 cagtacaggg tcaatgcggc aatcagcacg cgcaggacgt tcaacggcag gctggtgcgg
     7321 ctcagcgcgg actcggcgat ggccacctgc acctcggcgc tctcgcggcg gccacggcgc
     7381 agcagcacga cctgcatgac gatgaagccg gcgaccagca cgccgccttc ccagcgcacc
     7441 agccggccgt cgaggccgaa caggatcagc agcgcagcgg ccgccagcag cgaccaccac
     7501 agcaccgtct gcaggcgcgc gcgcagcagc aacggtgcgg cgatcgccgc cagggccagg
     7561 gtcaagccca ggttggcgat gctgctgccc accgcattac ccaatgccag ctccggttgg
     7621 ccgaccgcca acgcccgcgc gttgaccgcc agttccggca acgaggtggt caccccaagc
     7681 agcagcaggc cggcggtgaa cgggctggcc ccgaagcgct gggccaggcc ggacacggcc
     7741 ttgacgatgg agtccccgcc cagcgccagc aacagcaggc cgagcaggaa ccaggcaatg
     7801 gcaatggcga tcatcgagca ctcccccagc ggtcgtggcg cgattctacg ctggccccgc
     7861 gcgcgtggct gggccgtgga tcaaggatca gccacagcct tccacgtaat cgacctgcgg
     7921 agtcttgccg acccgccatg cgccgacctt gccgtcggca cccagcgcga agtcgatcac
     7981 cgcatcgcct tcctgcgccg ggcgcacacg caggtgctgg gccttctcgt cgtacttgtc
     8041 ggggccgaca tcggcgcgct cggggtacag cacctgcagc tcgcccaggg tcatgccgac
     8101 cttgccgccg cccggtgcga tgatcgcggc gctgcgcacg tcgtagcgca ccagcttgcg
     8161 gccttcgatc atgaggcgcg gatcctcggc gtcctgtgga cgcaggaagt agcagccatc
     8221 gttgctgtcg tcggccggca gcggcttgcc ggcggcatcg gtgccgagcc cctgcagcgg
     8281 cgttccaaat ccactacgga cttcggcgat ggtggcgccc agcttgacgc ctgcgaagcc
     8341 gtccaggcgc gctgggctgt cagcccggag gtcattggcg gggcgggcgg ccagatccgg
     8401 atccgccgac tgtgccggcc cggttgccga agcggtttcc gccggcgtgt cactgccgct
     8461 gcccgcggcg ccctgtttgt cggagccacc gttgcaggcg gtaagcgaaa ggagcatcag
     8521 accagcaatc ggaaggtgct tcatcagtgc ggttccctgg cacgaaggtg gctgcacgct
     8581 agcgcaattc gcgtgcaggc gctgcattgt catcgcggtt tcatcgcctt cgttcaggct
     8641 cggcctgcac cgactcgcca gtcccttcca tgcaaccgcg caagaccgat ctcgcccgaa
     8701 ccgcgctgca ggcccaccgc gcgccgctgg acatgcgcca gcgccggctg ttgatcctgt
     8761 gcgatggcca gcgcaccgtc gccgagctga ccgacctgct cggccaggaa gcgcccgcca
     8821 tggtgatcca gctggtgcag agcggttacc tggacaccgg gccgaccaca gcaccgctgc
     8881 cggcgcccgc cgcaccgtcc gcacggcccg ctacgccacc ggccccgacg cccatcacgg
     8941 ccagcgcacc cgcaccagcg cccacggcgc cggtcgaacg ccgccgctcg ctggtggccg
     9001 cgcgcatcta tgtactgggc atcctggaaa tgcagcgcca cccgcaggcg gcggccctgt
     9061 tccgcgacct gcagcaggcg cgtgcggaag acgaagtgct gcagcggctg cagtcggcga
     9121 tgcagatgct gcccggtctg acctcggacg gctattgcca gcgcgtgcgg cagcgcctgc
     9181 tggaggcact gccgctggag cattgcgacg ccttcgccga agccgcgtaa gcgcagttcc
     9241 ggcgggaatc atccacgcca tgcgtggaca cggtcagggt ccgtgccgac caaggtcggc
     9301 acctaccaag ctagcgggac ggccggaaat tgttgcgcag gccgttccag cactgctggt
     9361 aatcgccctg gcgatggccg gcggccagcg cctgtgcggt cggccggatc accgcgcggg
     9421 tctcgaacat gaaggccatc gtgtccttga tcacgtccgc cttcgacaga tcggcattgg
     9481 aggccttgtc gaaagtcggt gcatccggtc cgtgcccact catgcagttg tgcagcgacg
     9541 cgccgcccgg cacgaagcct tcggccttgg cgtcgtacgc accatgcacc aggcccatga
     9601 actcgctggc gatgttgcgg tggaaccacg gcggacggaa cgtgttctgc gccaccagcc
     9661 agcgcggcgg gaagatcgca aagtccatgt tgctggtgcc cggcgtgtcg ctgggcgaat
     9721 gcagcaccag gaagatcgac ggatccgggt ggtcatagct gatcgagccg atggtgttga
     9781 agcggcgcag gtcgtagcgg tacggcgcgt aattgccgtg ccaggccacc acgtccagcg
     9841 gcgaatggtc gatcggggcc cgccacaggc ggccgtcgaa ctttgcgatc agttcgaaat
     9901 caccgtccac gtcctcgaac gccgcgtgcg gcgtctcgaa gtcgcgcggg ttggccaggc
     9961 cgttggagcc gatcgggccg aggtcgggca gtttcagcag cgcgccgtag ttttcgcaga
    10021 tgtagccacg gctcgggccg tcgggcagtt ccacccggaa gcgcacgcca cgcgggatca
    10081 ccgcaatctg ctgcggctcg atctcgatca cgcccagctc ggtcagcagg cgcagcgcgc
    10141 ccagctgcgg cacgatcagc agttcaccgt cggcgtcgta gaagtagcgg ccgaccatgt
    10201 cgcggttggc agcgtagagg tggatgccca cgccggcatg cgcatcgggc gagccgttgc
    10261 cgcccatggt gtacaggcct tcgacgaagt cggtcggcag ctccggcaac ggcagcgggc
    10321 tccagcgcag ctgattcggc gaggccggct gtgcgccgaa atcacactgc agctgcgact
    10381 gcgcgaacgg ggtgaactcg ccgtgggtga ccgccgggcg gatccggtac aaccagctgc
    10441 ggcggttgct gccgcgtggc gcggtgaagg cggtgccggt cagctgttcg gcatacaggc
    10501 cgtgggccac cttctgcggc gagttctgcc cgaccggcag tgcaccggcc acggcctcgg
    10561 tggcgaattc gttgccgaaa ccggactggt agccgcgggc ggtgagggcg gtggacatgg
    10621 aaactccaga gattgccggc ctgcggccgg cactaccatt cggacaggca atgtcggcgg
    10681 gaggccgaca ttgcctgcag accttacagc acgccgcggc ggatctggtc gcgctcgatg
    10741 ctctcgaaca gcgcggtgaa gttgccttcg ccgaagcctt cgttgccctt gcgctggatg
    10801 atctcgaaga agatcgggcc gatgcagttc tgggtgaaga tctgcagcag cttgcgctgg
    10861 tgggtttccg gatcggcgtc gatcaggatc ttgttcttcg ccaggcgcgc cacgtcttca
    10921 ccgtggttcg gcacacgctg gtcgatcacg tcgaagtagg tctccggcgt gtcgaggaag
    10981 tccacgccct gcgcgcgcat cgcttcgacg gtctcgtaga tgttctcggt aaagcaggcg
    11041 atgtgctgga tgccctcgcc cttgtacgcg tccaggtatt cgttgatctg gctcttcggg
    11101 tcggacgatt cgttcagcgg gatgcgcacg atgccgtccg gcgcggtcat cgccttggac
    11161 accaggccgg tcttcaggcc cttgatgtcg aagtagcgga tctcgcggaa gttgaacagg
    11221 cgctcgtagt agtccgacca ctgctgcatg ttgccgaagt acaggttgtg ggtcaggtgg
    11281 tcgatgaagg tcagcccgaa gccgaccggg tgcaggtcgg tgccggcgat ctgctcgtag
    11341 tcgccgtcga agatgctgcc ggcgctgcca tagcggtcga ccaggtacag catgcagtcg
    11401 ccgatgccct tgatgaccgg cgcgttgacg gccttgctgt ccggcttgaa ggcgatggct
    11461 tcggcgccgt tgcccaacgc ggtctggtag acctcctggc ccggcttctt gaagcggatg
    11521 gcgaagccgc aggcgcacgg accatgcttt tcggcgaagt cggcagcgaa cgaatcgggg
    11581 tcttcattga ccaggaagtt gacgtcgccc tggcgataga cggtaatcgg acgctgcttg
    11641 tgcttgagca ccgcgctgaa gcccatcttc cggaagtact cgtgcagctc ctggccacgg
    11701 ccggccgggg cggcgaattc gacgaactcg aagccgtcga tgcccatcgg gttctcgaag
    11761 gtggtgacct gcatgccggg gttggggtgc gaggcggtcg ggactgcggt attcatggcg
    11821 tggctccgaa tcggtaccgc atcggtacaa accaggtgcg ggcaggtagg gacccggcga
    11881 gaatgcaggg tctggaccta ccccttatag ttacacttga aaccaccagc aaggtgcacc
    11941 gcaacatgag ccccgaaccc gcctcgaccc gcctgcgtgc ctcgcacgtc ctgctcgacc
    12001 tggaacagtt cctgccctac cggctgagcg tgctgtccaa ccgggtcagc ggcaacatcg
    12061 ccaagctata cggcgatcgt tacggcctgg cgattcccga gtggcgggtc atcaccatcc
    12121 tggcgctgta cccgggctcg tcggccagcg aggtctccga ccgcacggcg atggacaagg
    12181 tggcggtcag ccgcgccgtg gcccgcctgc tggagcgtgg cttcatcaag cgcgagaccc
    12241 atggcgacga ccgccgtcgc tcggtgctgg ccctgtcggc ggccggcttc gaggtgtacg
    12301 agaccatcgc gccgatggtg atcgagatca cccgcaagct gatgtcggta ctgagcgacg
    12361 aggaagagca ggtgctggag aagctgatcc tgcgcctggc cggcgacggc ctggagcgga
    12421 tgggcgaagg ggtgtgaaag aaaaagggga cggaggggat taagtcgttt tgggccccaa
    12481 gtcacgggtg ccggccctgt ccggtagcgg aacagtggct gggcgattgt cgtcctcccc
    12541 ctttgatctg acgggacccg ctctctagcg ggcggcgggc cgactgcaaa cgaggccgtc
    12601 gaacgcattc acttcccgca gatcccgtcc tgaagtgtcg ccctcgcccg ccagcatttc
    12661 cgcattggcc cgatacggcc cgtttccgcg aggctggtgt atcgaaacgg gctggtccag
    12721 tgagttctcc tattggacta tccgtgtgtg cggcctgacg gtaagcgttc aacgggtatc
    12781 agcccggcca cggatccaca tcgcacggac tccctcatgg atgacacgtg ttcaacgctg
    12841 ccgcatggcc aggaattgct ggccgatctc agagacctga tctgcgaggc acgcagtagg
    12901 atgcacaggt ccatcaacgc cggactgacc ctgctgtatt ggcgaatcgg gcgtcgcatc
    12961 catgtggacc agatggctgg gcagcgggcg cgctacggag agcttgcctt catccggatc
    13021 gccaaggcgc tgtctgccga attcggcaca tccttcggtg agaagagcct gcgcaggatg
    13081 gtgcagttct caaccgcatt tgcagacgag cagattgtcg tatcgctgat acgacaattg
    13141 agctggacgc acttcatcgc gctgatccca ctggcggatc ctctcaagcg cgacttctat
    13201 gcgcagatgg ccgccaccga gggctggagt gtacgcacgt tgcgccagcg catcgattcg
    13261 atgctgtatg agcgcacagc gctatccagc caacccgagc agaccatcgc cgatgagttg
    13321 gcggcactgc gcagcaacca gccgctgtct ccggggctgg tactgcgtga tccctacgta
    13381 ctagattttc ttggtctgaa ggacagctgg gacgagcagg accttgaaag cgcgatcctt
    13441 cgcgagatgc agggtttcct gctcgaactt ggcacgggct tcagtttcgt cgcccgccag
    13501 aaacgcatcc agatcgacgg cgatgacttc cacctggacc ttctgttcta caaccggcgc
    13561 ctacgcaggc tgatcgccat cgaactgaag atcggcgagt tcaagcccgc ctacaagggg
    13621 cagatggaac tctatcttcg atggctggac cgctacgaac gtgaggacgg cgagcaggag
    13681 ccgttgggca tcatcctctg cacagggaag aaagccggcc agatcgaatt gctggagctg
    13741 gaccgctcgg gcatccatgt tgcggaatac ctgaccactc tgccctctcg tgaggtcctc
    13801 aagcaaagat tgcagaccgc catggagcgg gcccggcaac agcttcagac cgcgccccca
    13861 agcccccggt agacgcatgc ctcagctcag gtgcttgcgc cgcgcatgga tccacggcac
    13921 cgccagcgcg gcgattgcgc cgccggcgaa gcccagtgac gccgcgacgg tggccgcttc
    13981 gaccgccccc ggcagtgcca gcgcggcagc caccagcagc agtgacggca agccgacgaa
    14041 ggtacccagg aagaagtgcc agcgcggcga ccaggtgttg agctgcagca ggctgaccgg
    14101 ctgccaggct tcggaggcgg cgtcttcggc gatcttcgcc accaccttgc ccaggtccac
    14161 ttcgggcagc gcgcggccga gccgggcggt ggccagcact tcggcaaccg cctccaccgg
    14221 cgggaagctg gtcggccacg cgaccggtgc cggcacgccg taggcggtca gcagcggtac
    14281 gctcagccac ggcgccacca gcgggcgcat gcgacggcgg ccgtgcacgc accagatctg
    14341 cggttggccg tgcgcggtga cgctgtacag cgccagctcg ttggccggcg ggtagcccag
    14401 catggtcacc cgtgccgcca ggctgtcctg gcccatcgca cgcaggaaac ccgggcggct
    14461 gcgcccttcc tgcatccacg ccaggcccag cgcccccacc aggtgggcct cggccacgtc
    14521 cttgctgccg gcggtggcgc gctcgtcact ggccaggtac caggccagtg acttcggttc
    14581 ggacacatcg tccagccccc agcggctgtc atcgccgagc acgtggcgca ccggcagccg
    14641 cgctggcgcg gtttcgcccc gctcgcccgg ctgcaggaac ggcagcacgc cctggatgaa
    14701 ggtggacagc tcgatcgcgc gcacgccatg gccctgccat tcc
//
LOCUS       DAOKIP010000095        14222 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.095,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000095 DAOKIP010000000
VERSION     DAOKIP010000095.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 14222)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14222)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14222
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.095"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(6..2126)
                     /locus_tag="QEL58_002351"
     CDS             complement(6..2126)
                     /locus_tag="QEL58_002351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012481583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing protein"
                     /protein_id="HDS1676812.1"
                     /translation="MNASVRAPRLQSKLLGAVSVGLAVVLLCALAGLASAWLKLSTDV
                     PPEVAHSRDAERLQREFRGQVQEWKNVLLRGHDDALRQHHLEAFDSEGRLVEQLAKGL
                     ASSLDARTREQAQAFIGLHAQLQKDYHAALQAFAAAGYDPAAGDTLVRGKDRPVATAL
                     DALSTQATQVAEAALAARSHQARQTLLLCAALTVLAAVLLLIGLAWWLRRAVVQPVLA
                     VEAAARAVAAGDLQHVVRVSSRDEIGRLAQAMQAVQSTLRGVLDAQGAMAQAHEAGTI
                     SHRMDASAFPGAFGEMVADSNALVDAHIQVKMRAIAIMGRYAIGDLSQDMERLPGEKA
                     VITEALDTAKANLGTINGEIRRLAEAAAAGDFSQRGDSARFEHDFRAMVDGLNRLMQA
                     TELNLGEVSGMLRAIADGRLGARMHGDFQGVFARIAGDANTTAAQLATIVTDIKHASG
                     NIHTAAAEIAAGNNDLSRRTEQQAANLEETAASMEELTSTVRQNAEHARQANQLAIGA
                     HSVASQGGSVVGQVVATMGAIETSSRQIAEIISVIDGIAFQTNILALNAAVEAARAGE
                     QGRGFAVVASEVRTLAQRSAAAAKEIKSLIEASVEQVGHGAQRVREAGDTMAEIVASV
                     QRVTDIMAEISAASQEQSAGIEQVSQTVIQMDGTTQQNAALVEEASAAARSLEQQANR
                     LIDAVDVFDLSTTAAAKDALQRAA"
     gene            2311..2766
                     /locus_tag="QEL58_002352"
     CDS             2311..2766
                     /locus_tag="QEL58_002352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005414850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HDS1676813.1"
                     /translation="MKSANPLSDALHVMAHLVGQSAPRTSEQLASCLPTHPVVIRRLL
                     AQLHRAGLVHTARGHGGGSQLARDAATITLHDIYLAVGAPPLVQVGARDSGGGCPIQH
                     LVNSALLEGAREAQRLLEQRLQAATLDQLGAEFARHLAHHRSLEGHHES"
     gene            2756..3661
                     /locus_tag="QEL58_002353"
     CDS             2756..3661
                     /locus_tag="QEL58_002353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014648822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HDS1676814.1"
                     /translation="MNPDVLIVGGSYAGIAAGLILARARRPVTVIDAGSPRNRFASHS
                     HGVLGLDGVSGAELLKTARQQLLDYPSVRWVHADAVHARSTRDGVEVETADGQVLAAR
                     KLLLASGIADQLPELPGLAERWGSTVLHCPYCHGYEVGGGAIGLLGGHPMSASKAPLF
                     ADWGNVTFFSQGLPITDDERAAMQQRGVQIETSPVLGVQGDQPSWLEVELADGRRIAQ
                     RALFVPATQAMATPLVQRLGCTLAESPLGVLIEVDAMKQTSVPNVYAAGDATTVGNIT
                     LATAEGVRAGIGMHHALVSEDSVPR"
     gene            complement(3788..5008)
                     /locus_tag="QEL58_002354"
     CDS             complement(3788..5008)
                     /locus_tag="QEL58_002354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005932307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RtcB family protein"
                     /protein_id="HDS1676815.1"
                     /translation="MDTQHNYQWLHAEGTTPIKGWVNGVPLEAQAHEQLRNIAAIPFV
                     GPWVAVMPDVHLGKGATVGSVIPTRGAIIPAAVGVDIGCGMAAVRTTLRANDLPDDLR
                     QLRNSIERSIPVGNGRGGEHQRMPDSIHTRLLQSGLAAGLEKIKDKHRRIRTDKLDRQ
                     LGTLGGGNHFIELCLDETDAVWVMLHSGSRGTGNLIGTYFIEKAREELARRVLGFHLP
                     DKDLAFFMEGEPLFDDYVEAVSWAQDYARQNREAMMSRVLAEMRHRLPKFQLAAMAVN
                     CHHNYVQKETHHGQELLVTRKGAVSAREGELGIIPGSMGTRSYIVRGKGNADSFHSCS
                     HGAGRVMSRGSARQQITLAQHREATAHVECRKDSGVLDESPAAYKSIDDVMAAQLDLV
                     DVVHTLRQVLCVKG"
     gene            complement(5065..6189)
                     /locus_tag="QEL58_002355"
     CDS             complement(5065..6189)
                     /locus_tag="QEL58_002355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005922438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="slipin family protein"
                     /protein_id="HDS1676816.1"
                     /translation="MFWTIKVVIGDGERGLVYRNRRFQQILLPGVHRLSPFGGRPQVD
                     IHTASKGAAYTGSDQDSLIEALGATLDTHFVLANVGATEVGLLLRNGRIDEVLPPGSR
                     RLYWRGSVDTQVRVMALGDEPRIAADVQQRLGQLGVLPRVAVISTVPSESVGLLFIDG
                     TLRQTLDAGLHAFWNFNGNVSVERVELRARSLDVSGQELLSRDKVTLRVNLAATVQVV
                     DPVRAHRTLSNADEFVYRQLQFGLRQAIAARSLDELLGDKAALDGEIAAHVQAAIEGH
                     GVRLLGVGIKDVILPGEMKEILNGVVLAEKQAQASVIRRREEANATRSQLNTAKLIED
                     NPVLMRLKELEALEKVTEKIDTLTVFGGLDGVLKQLVTIR"
     gene            complement(6544..6615)
                     /locus_tag="QEL58_002356"
     tRNA            complement(6544..6615)
                     /locus_tag="QEL58_002356"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(6581..6583),aa:Gln,seq:ctg)
     gene            complement(7033..7254)
                     /locus_tag="QEL58_002357"
     CDS             complement(7033..7254)
                     /locus_tag="QEL58_002357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006401337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676817.1"
                     /translation="MPAAGRHRTTAKKIIEQNGCARLNRGLSCAPRFNNHWKPPLNAH
                     SVAIAKLLPCLRMDVLARAFGKEVQLTTA"
     gene            complement(7261..8217)
                     /locus_tag="QEL58_002358"
     CDS             complement(7261..8217)
                     /locus_tag="QEL58_002358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006401335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HDS1676818.1"
                     /translation="MTATRELGRSGLHVRPLAFGGNVFGWSADEKASFALLDAFVDAG
                     FNLVDTADVYSAWVPGNAGGESETLIGKWFARSGKRDKVVLATKVAKWAERPGLTPDN
                     INAAVEDSLRRLQTDVIDLYQAHEDDESTPLEATLAAFGRLIEAGKVRAIGASNYSAT
                     RLADALKVSTDYKLPRYETLQPEYNLYDRAGYEKELEPLVQREQIGVIGYYALASGFL
                     SGKYRTAADAAKSPARGENVVKRYLNPRGLRILEALDDVASKHNASAAQIALAWQIAR
                     PSITAPIVSATSVEQLHDLLAAANVSLSVQDVAQLDAASKEG"
     gene            8387..9244
                     /locus_tag="QEL58_002359"
     CDS             8387..9244
                     /locus_tag="QEL58_002359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012512445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HDS1676819.1"
                     /translation="MMPASSLRGCRLLLASALLAAVPAFAAPATVAPAKIQVSPAIDA
                     AVKAPTRDANNVKRDTYRHPAQTLSFFKVAPEKTVIEITPGNGWYSEILAPLLHGKGH
                     YVAAVVDPMAVPEGRGRDYQQRSHDSLEKKYAAAPAQFGKTAVVAYDPAKPVFGPAGS
                     ADVVLTFRNVHNWRKAGQAQGMFQGFFNVLKPGGVLGVVEHRAKADVADDDDTGYVGQ
                     QQVIAMAEAAGFKLDARSEVNANPRDTKDHPNGVWTLPPTNQHDKADDAKYQAIGESD
                     RMTLRFIKP"
     gene            9349..9609
                     /locus_tag="QEL58_002360"
     CDS             9349..9609
                     /locus_tag="QEL58_002360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010482266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676820.1"
                     /translation="MKKILYIAVAVLVLTRLIDFVFYGGHAHDLVGAAGFGVLFAGIL
                     LEERARSARPPSAHLRRRANIIAACGIALVLGSFLLEWKVFG"
     gene            9678..10217
                     /locus_tag="QEL58_002361"
     CDS             9678..10217
                     /locus_tag="QEL58_002361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014038904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridine synthase"
                     /protein_id="HDS1676821.1"
                     /translation="MLIAFNKPFNVLCQFTDRSVPPRPTLAGFGLPPRVYAAGRLDHD
                     SEGLLLLTDNGTLAHKLTDPKHKADKTYWVQVEGTPSDEQLQQLRDGVLLNDGPTLPA
                     KIERLDPAPSLWTRDPPVRFRKTVPDAWLAITIREGRNRQVRRMTAAVNLPTLRLVRM
                     AMGPYRLDDLQPGQWRQIG"
     gene            complement(10291..10665)
                     /locus_tag="QEL58_002362"
     CDS             complement(10291..10665)
                     /locus_tag="QEL58_002362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005411574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676822.1"
                     /translation="MSKLTVITDRALERALELAHTAGDGLKSAGGSLRNADWIKTGAA
                     IGAVKTGGKAATKFVRRNPAVAVAAAAVGVGLLGYALYRKQQKKKAANGHVVNGQAQR
                     ISARDRRNATVVDEHSDIGSDA"
     gene            complement(10801..13305)
                     /gene="hrpB"
                     /locus_tag="QEL58_002363"
     CDS             complement(10801..13305)
                     /gene="hrpB"
                     /locus_tag="QEL58_002363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011050223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent helicase HrpB"
                     /protein_id="HDS1676823.1"
                     /translation="MNAPLFPISPLLPQIQQHLAAQPRLVLEAPPGAGKTTQVPLALL
                     DAPWLQGRKIILLEPRRVAARSAALFMARQLGEEVGGTVGYRIRFENKVSARTRIEVV
                     TEGILTRMLQDDPMLEDVGAILFDEFHERHLSGDLGLALALDVQAQLRDDLRLVVMSA
                     TLDGERLARFLDAPRLSSEGRSYPVAISHFPARRDEALELQVRRAVQQALAEHPGDLL
                     VFLPGQREIARVQAGLQESLDAGVEVLALHGELPVEQQARVLQAASDGRRRVVLATNV
                     AESSVTLPGVRVVIDSGQAREPRYDPNSGFTRLDVVAIAQASADQRAGRAGRVAEGVA
                     WRLWPQSQRLEPQRRAEIDQVELAGLALELAAWGSSDLRFLDPPPAGPMGAARELLQR
                     LGALSESGAITALGRRVLALGTHPRMAAMLLAAPDARAQALAADLAALLEARDPLRQG
                     GDALAARWRALAAFRNGRAPGDANRSGLAAIDAAAKQWRRRLRCEATPPSSIEAHELG
                     DLLAHAFPDRIGVQHPNDPLRYLLANGRSARLHELSDLRGEPWLVASELRFEARDALL
                     LRAAPVDEGQLRTAWPERFVTEDVVRWDSERRALVALRETRFDRIVLDSRSAGRVDPQ
                     HAAQALTDAVAELGLQALPWTEGLRQWQARVESLRRWMPELELSDCSDAALLANRAQW
                     LQPAFAGKSRLDALDEASFGEALKSPLEWSQRQLVERHAPTRITVPSGLERPITYALD
                     SESGEPLPPVLAVKLQELFGLADTPRIADGRVPLTLHLLSPGGRPLQVTQDLRNFWEN
                     TYAEVKKEMKGRYPRHPWPDDPWTATATHRAKPRGT"
     gene            13373..14170
                     /locus_tag="QEL58_002364"
     CDS             13373..14170
                     /locus_tag="QEL58_002364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014038902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HDS1676824.1"
                     /translation="MHLIDIGANLTHDSFDRDRDAVLDRARQAGVVQMVITGASREHS
                     PLALQLAQQHPGFLYATAGVHPHHAVEYTEECDAEMRALHAHPEVVAVGECGLDYFRD
                     FSPRPAQHRAFERQLQLAADNGKPLFLHQRDAHADFMAQMKNFEGRIGPAVVHCFTGE
                     RDELFDYLDQDWYIGITGWLCDERRGAHLRELVKNIPANRLMIETDAPYLLPRTLKPL
                     PKDRRNEPMFLSHIVEELARDRGEDVVVTAANATAATRAFFRLPDAG"
BASE COUNT         2192 a         4908 c         4761 g         2361 t
ORIGIN      
        1 atcaatcagg ctgcgcgttg cagcgcatcc ttcgccgccg ccgtggtcga caggtcaaat
       61 acatccacag cgtcgatcag gcggttcgcc tgctgctcca gactgcgtgc agcggcgctg
      121 gcctcttcca ccagcgcagc gttctgctgg gtggtgccat ccatctggat cacggtctgg
      181 ctgacctgct cgatgccagc gctctgttcc tgcgacgcgg cggagatctc ggccatgatg
      241 tcggtgacac gctgcaccga ggccacgatc tcggccatgg tgtcgccggc ctcgcgcacg
      301 cgctgcgcac cgtgcccgac ctgttccacc gaggcttcga tcaatgactt gatctccttc
      361 gccgcagcgg ccgaacgctg cgccagcgtg cgtacctcac tggcgaccac ggcgaagccg
      421 cggccctgtt caccggcgcg tgcggcttcc accgcagcgt tcaacgccag gatgttggtc
      481 tggaacgcga tgccatcgat cacgctgatg atctcggcga tctgccgcga cgaggtctcg
      541 atcgcgccca tcgtcgccac cacctggccg accacgctgc cgccctgcga ggcgacgctg
      601 tgcgcgccga tcgccagctg gttggcctgg cgcgcgtgct cggcattctg ccgaacggtg
      661 gaggtcagtt cctccatcga cgcggcggtc tcttccaggt tggcggcctg ctgctcggta
      721 cgacgcgaca ggtcgttgtt gccggcggca atctccgccg cagccgtgtg gatgttgccg
      781 gaagcgtgct tgatgtcggt gacgatggtc gccaactgcg cggcggtggt gttggcgtcg
      841 ccggcgatgc gggcgaacac gccctggaaa tcgccgtgca tgcgtgcgcc gaggcggcca
      901 tcggcaatcg cgcgcagcat gccggagacc tcaccgaggt tcagttcggt ggcctgcatc
      961 aggcggttca ggccgtcgac catcgcgcgg aagtcatgtt cgaagcgcgc gctgtcgccg
     1021 cgctggctga agtcgccggc ggcggcggct tcggccaggc ggcggatctc gccattgatg
     1081 gtgcccagat tggccttggc ggtatccagc gcttcggtga tcaccgcctt ctcgccgggc
     1141 aggcgttcca tgtcctgact aaggtcgccg atggcatagc ggcccatgat cgcgatcgcg
     1201 cgcatcttca cctggatgtg cgcgtccacc agcgcattgc tgtctgccac catctcgccg
     1261 aacgcgccgg ggaaggcgct ggcatccatg cgatggctga tggtgccggc ctcgtgcgcc
     1321 tgcgccatcg cgccctgtgc gtccagtacg ccgcgcagcg tggattgcac cgcctgcatc
     1381 gcctgcgcga ggcggccgat ctcatcgcgg ctgctcaccc gcaccacgtg ctgcaggtcg
     1441 ccggcggcga ccgcgcgtgc ggcagcttcc accgccagca ccggctgcac caccgcacgc
     1501 cgcaaccacc aggccaggcc gatgagcagc agcaccgcgg ccagcacggt cagcgccgcg
     1561 cacagcagca gggtctgccg cgcctggtgc gaacgcgccg ccagtgccgc ttcggccacc
     1621 tgcgtggcct gcgtgctcag cgcatccagt gcggtggcca ccggacgatc cttgccacgc
     1681 accagggtgt cgccagcggc gggatcgtag ccggcggcgg cgaaggcctg cagcgcggcg
     1741 tgatagtcct tctgcagctg cgcatgtagt ccgatgaagg cctgcgcctg ctcgcgcgtg
     1801 cgcgcatcca ggctgctggc gaggcccttg gccagttgtt cgaccaggcg gccttcgctg
     1861 tcgaaggcct ccaggtgatg ctgacgcagc gcgtcgtcat gcccgcgcag cagtacgttc
     1921 ttccattcct gcacctggcc gcggaactcg cgctgcaggc gctcggcatc gcggctgtgc
     1981 gcgacttcgg gcgggacatc ggtggacagc ttcaaccagg cggaagcaag acctgccagg
     2041 gcgcacaaca ggactacggc caggccaacg gaaaccgcgc cgagcagctt ggactgcagg
     2101 cggggtgcac ggacagacgc attcatcgga aggggctctc gggaaggggc gatgcggtat
     2161 cgaccggttt cgatcacctc tgaagtgcga cgttgatcac attcgcgttt cgtttagcga
     2221 agtgaaggaa acatttcata ggacaaatgt gtccatatgg aacgaaagca gactctggac
     2281 aggggattta aatgtaacta ttgttgttac atgaaatccg cgaacccgct ttccgatgcc
     2341 ctgcacgtga tggcgcacct ggtcggccag agcgcaccgc gcacctccga acagctggcg
     2401 tcgtgcctgc cgacccatcc ggtggtgatc cggcgcctgc tggcgcagct gcacagggcc
     2461 ggcctggtgc acaccgcacg cggccacggc ggcggcagcc agctggcccg cgacgccgcc
     2521 accatcaccc tgcacgacat ctatctggcc gtaggcgcgc cgccgctggt acaggtcggt
     2581 gcccgcgatt ccggcggcgg ttgcccgatc cagcacctgg tcaacagcgc cctgctggag
     2641 ggcgcgcgcg aggcccagcg gctgctcgaa cagcgcctgc aggcagccac gctggaccag
     2701 ctcggtgccg aattcgcccg ccatctcgcc catcaccgct ccctggaagg tcaccatgaa
     2761 tcctgatgtg ctcatcgtcg gcggcagcta tgccggcatc gccgccggcc tgatcctggc
     2821 ccgcgcccgt cgcccggtca ccgtcatcga cgccggttcg ccgcgcaacc gcttcgccag
     2881 ccattcgcac ggcgtgctgg ggctggatgg tgtcagcggc gccgagctgc tcaagaccgc
     2941 ccgccagcag ctgctggact atcccagcgt gcgctgggtg catgccgatg cggtgcatgc
     3001 ccgcagcacc cgcgatgggg ttgaagtgga gaccgccgac ggccaggtgc tggccgcgcg
     3061 caagctgctg ttggccagcg gcatcgccga ccagctgccg gagctgccgg gcctggccga
     3121 gcgctggggc agcaccgtgc tgcactgccc ctactgccat ggttatgaag tcggtggcgg
     3181 tgcgatcggc ctgctcggcg gccacccgat gtcggccagc aaggcgccgc tgttcgccga
     3241 ctggggcaac gtcaccttct tcagccaggg cctgccgatc accgatgacg aacgcgccgc
     3301 catgcagcag cgcggcgtcc agatcgagac ctcgccggta ctgggcgtgc agggcgacca
     3361 gccgagctgg ctggaagtgg aattggccga cggccgtcgc atcgcccagc gtgcgctgtt
     3421 cgtgccggcc acccaggcga tggccacgcc gctggtacag cggctgggtt gtacgttggc
     3481 cgagagcccg ctgggcgttc tgatcgaggt cgatgcgatg aagcagacct cggtgccgaa
     3541 cgtgtatgcc gcaggcgatg cgaccacggt cggcaacatc accctggcca ccgccgaagg
     3601 agtgcgcgcg ggaatcggca tgcatcatgc gctggtgagc gaagacagcg tgccgcgctg
     3661 atcgggcttg ttctgtagag gccgaccctg gtcggcgccg ctgcatccac gcatggcgtg
     3721 gatctactgc agggtggtcg gcaccattga ggcacggtgg gtgccggcct tggccggcac
     3781 cgttccctca tcccttcacg cacagcacct ggcgcagggt gtgcaccacg tcgaccaggt
     3841 ccagctgtgc cgccatcacg tcatcgatcg acttgtacgc cgccggtgac tcgtccagca
     3901 cgccgctgtc cttgcggcat tccacgtgcg cggtggcctc gcggtgctgg gccagggtga
     3961 tctgctggcg tgcgctgcca cggctcatca cccggccggc gccgtggctg cagctgtgga
     4021 agctgtccgc gttgcccttg ccacgcacga tgtagctgcg cgtgcccatg ctgccgggaa
     4081 tgatgcccag ctcgccttcg cgggcactga ccgcaccctt gcgcgtcacc agcagctcct
     4141 gcccgtggtg cgtctccttc tgtacatagt tgtggtggca gttcaccgcc atcgccgcca
     4201 gctggaactt cggcagccgg tggcgcatct cggccagcac ccgcgacatc atcgcctcgc
     4261 ggttctgccg ggcgtagtcc tgcgcccacg acaccgcctc gacgtagtcg tcgaacagcg
     4321 gttcgccttc catgaagaac gccaggtcct tgtccggcag gtggaagccg agcacgcgcc
     4381 gggccagctc ctcgcgcgcc ttctcgatga agtaggtgcc gatcaggttg ccggtgccac
     4441 gcgagccgct gtgcagcatc acccacaccg cgtctgtctc gtccaggcac agttcgatga
     4501 aatggttgcc gccgcccagc gtacccagct ggcggtcaag cttgtcggtg cggatccggc
     4561 ggtgcttgtc cttgatcttc tccagcccgg cggccagccc ggactgcagc agacgggtgt
     4621 ggatgctgtc gggcatgcgc tggtgctcgc cgccgcggcc gttgccgacc gggatgctgc
     4681 gctcgatgct gttgcgcagc tgccgcaggt catcgggcag gtcgttggcg cgcagcgtgg
     4741 tacgcacggc ggccatgcca caaccgatgt cgacgccgac cgcggccggg atgatcgcac
     4801 cacgggtcgg gatcaccgag cccacggtcg cgcccttgcc caggtgcacg tccggcatca
     4861 cggccaccca cggcccgacg aacgggatcg cggcgatgtt gcgcagctgc tcatgcgcct
     4921 gcgcttccag cggcaccccg ttgacccagc ccttgatcgg cgtggtgccc tcggcgtgca
     4981 gccattgata gttgtgttga gtgtccatgt cttcgtgtat gtccttgatg ggccggtggc
     5041 gcgtccctgc gccaccgcta ccccctacct gatcgtcacc agctgcttca gcacgccgtc
     5101 caggccgccg aacacggtga gcgtgtcgat cttctcggtg accttctcca gcgcctccag
     5161 ctccttcaag cgcatcagca ccgggttgtc ctcgatcagc tttgcggtat tgagctgcga
     5221 acgcgtggcg ttggcctcct cgcgacggcg gatcacgctg gcctgggcct gcttctcggc
     5281 cagcaccacg ccattgagga tctccttcat ctcgcccggc aggatcacgt ccttgatgcc
     5341 cacgccgagc aaccgcacgc cgtggccctc gatcgccgcc tgcacatgcg cggcgatctc
     5401 gccgtccagt gccgccttgt cgcccagcag ctcgtccagg ctgcgcgcgg cgatcgcctg
     5461 gcgcaggccg aactgcagtt gccggtagac gaactcgtcg gcattgctga gcgtgcggtg
     5521 tgcgcgcacc gggtcaacca cctgcacggt cgcggccagg ttcacccgca gggtcacctt
     5581 gtcgcggctc agcagttcct ggccggacac gtccagcgaa cgcgcacgca gctccacgcg
     5641 ctccaccgac acattgccgt tgaagttcca gaacgcgtgc aggccggcgt ccagcgtctg
     5701 ccgcagcgtg ccatcgatga acagcaggcc gaccgactcg ctcggcacgg tgctgatcac
     5761 cgctacacgc ggcagcacgc ccagctggcc caggcgctgc tgcacgtccg ccgcaatgcg
     5821 cggctcgtca cccagcgcca tcacccgcac ctgggtgtcg accgaacccc gccagtacag
     5881 gcggcggctg cccggcggca ggacttcatc gatgcggcca ttgcgcagca acaggccgac
     5941 ctcggtggcg ccgacattgg ccagcacgaa gtgcgtgtcc agcgtcgcgc ccagtgcctc
     6001 gatcaggctg tcctggtcgc tgccggtgta ggccgcgccc ttcgatgcgg tgtggatgtc
     6061 cacctgcggg cggccgccga acggcgacag gcggtgcacg cccggcagca ggatctgctg
     6121 gaaacgacgg ttgcgataca ccaggccgcg ctcgccgtcg ccgatcacga ccttgatggt
     6181 ccagaacatg ggagtctctc cttgtatggc tctggtggtt cgacccgatg ggatgaaacg
     6241 ccatgacccg ggccgatcag gtcgtggcgt ggccggctgc acagcgtgcg cagcccgcgg
     6301 aagagggcgg ccatcgcggg acggtccgca cgcggagcct gcggcgcgtc atcacccgtg
     6361 ccatcgtcgt tgccggcagg cagcaccggt gcggagcggg gcaatgggtg gcgacgggcc
     6421 agggcccggc gtgtggtccg ttgccgtcct ggccgcgccc gaaggcggtg gcagggaagg
     6481 cgacgatggc cgctggggct tgcgccccag gtgttgcttc aagtcatgac gtgacaggtc
     6541 atgtggttgg agtgggaatc gaacccacga cagacggaat caggatccgt tgctctgacc
     6601 aagctgagct atccagttgg gaaccgcgcg gaatcgaacc gcgtaccggc gaaccggcgc
     6661 ctgtctccag caggcagtcc aggcgatggc atgtccgcga cctccggcat acgccacggc
     6721 aacgccgcgc gcaccagccc gtggttgaaa cgggaccgtt ggagaatcgg gggtgcaggc
     6781 caccgacatt atcgacgagc gataatgttt tgatgcgatg cagataatgt ccaggcgtcg
     6841 ccgttcgcgc gaagtaaatc cttcggcggt gcggaaaaac ctgggtcagt gagcggcggg
     6901 ttgccgcgcg gggtgcagtt ctggcatcgc gggtccttgt gccgacgcaa acgaaaacgc
     6961 ccccgggact tgcgttccga gggcgtcgtc aggcctcgga gatcggggtg gccgatctcc
     7021 gcagggcggg tatcaggccg ttgtcagctg gacttccttg ccgaacgcgc gcgccagcac
     7081 gtccatgcgc aggcatggca gcagtttggc gatggcgacg gaatgcgcgt tcaagggagg
     7141 tttccagtgg ttgttgaaac gaggtgcgca cgataaacca cgatttagtc gtgcgcaacc
     7201 attttgttca attattttct tcgctgttgt gcgatgccgg ccagccgccg gcactacacc
     7261 tcagccctct ttgctggcgg catccagctg cgcgacatcc tgcacgctca gcgacacgtt
     7321 ggccgccgcc agcaggtcgt gcagctgctc gacgctggtg gcgctgacga tcggcgcggt
     7381 gatcgagggc cgtgcgatct gccacgccag tgcgatctgc gcggcgctgg cgttgtgctt
     7441 gctggccacg tcatccagcg cttccaggat gcgcaggccg cgcgggttga ggtaacgctt
     7501 caccacgttc tcgccccgcg ccgggctctt ggccgcgtcg gccgcggtgc ggtacttgcc
     7561 gctgaggaag ccactggcca gcgcgtagta accgatcacg ccgatctgct cgcgctgcac
     7621 caacggttcc agctccttct cgtagccggc gcggtcgtac aggttgtact ccggctgcag
     7681 ggtttcgtag cgcggcagct tgtagtcggt ggacaccttc agcgcatcgg ccaggcgcgt
     7741 ggcgctgtag ttggaggcac cgatggcgcg aaccttgccg gcttcgatca ggcggccgaa
     7801 cgcggccagc gtggcttcca gcggcgtcga ctcgtcatcc tcgtgggcct ggtacagatc
     7861 gatcacgtcg gtctgcaggc ggcgcagtga atcctcgacg gcagcattga tgttgtccgg
     7921 ggtcaggccg gggcgctcgg cccacttggc caccttggtc gccagcacca ccttgtcgcg
     7981 cttgccgctg cgggcaaacc atttgccgat cagcgtttcc gattcgccgc cggcattgcc
     8041 cggcacccac gccgagtaca cgtcggcggt gtcgaccaga ttgaagccgg cgtcgacgaa
     8101 ggcatcgagc agggcgaagc tggccttctc atcggcgctc cagccgaaca cgttgccacc
     8161 gaaggcgagc ggacgtacat gcaggccgga acggcccagt tcgcgggttg ccgtcatggg
     8221 cacggactcc ttgggggaag tgctccagaa tagaacgcgt tgtgtgaccg cgctgcggcg
     8281 gcgaccacaa aacagtgttc cgccgcacga ctccggctaa cgttttgtga acacctggga
     8341 cgctgcgact gctagtctcg ccgcatcttc cgctggagtc gccccgatga tgcctgcttc
     8401 gtccctgcgt ggttgccgcc tgctgcttgc ctcggccctg ctcgccgctg ttcccgcatt
     8461 tgccgcaccg gccacggtgg caccggcgaa gatccaggtc tcgccggcca tcgatgcggc
     8521 ggtgaaggcg cccacccgcg atgccaacaa cgtcaagcgc gacacctatc gccatccggc
     8581 gcagacgctg tcgttcttca aggtcgcgcc tgaaaagacc gtcatcgaga tcacccccgg
     8641 caacggctgg tactcggaaa tcctggcgcc gctgctgcat ggcaagggcc actacgtcgc
     8701 cgccgtggtc gatccgatgg cggtgcccga aggccgcggc cgtgattacc agcagcgcag
     8761 ccacgacagc ctggaaaaga agtacgccgc tgcaccggca cagttcggca agaccgccgt
     8821 ggtcgcctac gatccggcca agccggtgtt cggcccggcc ggttcagccg acgtggtgct
     8881 gaccttccgc aacgtgcaca actggcgcaa ggccggccag gcgcagggca tgttccaggg
     8941 cttcttcaac gtgctcaagc cgggtggcgt gctgggcgtg gtcgagcatc gcgccaaggc
     9001 cgatgtggcc gacgatgatg acaccggcta cgtcggccag cagcaggtga ttgcgatggc
     9061 cgaggcggct ggcttcaagc tggacgcacg cagcgaggtc aacgccaacc cgcgcgacac
     9121 caaggaccac ccgaacggcg tatggacgct gccgccgacc aaccagcatg acaaggccga
     9181 cgacgcgaag taccaggcaa tcggcgaaag cgaccgcatg accctgcgct tcatcaagcc
     9241 gtaaggcggc acgccgcatt gcccgcgcgg agtgcccacc atggagccgg gcccatgccc
     9301 ggctcaccgc gcgcgccggg gttcaatcgt attcaaggac atggactgtt gaagaagatc
     9361 ctttacatcg ccgtcgcggt actggtgctg acgcggctga tcgatttcgt gttctacggc
     9421 ggccacgccc acgacctggt cggggccgct ggtttcggag tgctgttcgc cggcatcctg
     9481 ctggaagaac gtgcacgcag cgcccgcccg ccctccgcac acctgcggcg ccgcgccaac
     9541 atcatcgcgg cgtgcggcat cgcgctggtg ctggggtcgt tcctgctgga atggaaggtg
     9601 ttcggctgag ccggcggtga tcgcggcggc ggcgcgggaa tgggacaatg ccgtacccgc
     9661 cgcctgccgc acccgcgatg ctgattgcct tcaacaagcc cttcaacgtg ctctgccagt
     9721 tcaccgaccg cagcgtgccg ccgcggccga ccctggcggg attcggcctg ccgccgcggg
     9781 tgtacgccgc cggccgcctg gaccacgaca gcgaaggcct gctgctgctg accgacaacg
     9841 gcacgctggc gcacaagctc accgacccga agcacaaggc cgacaagacc tactgggtgc
     9901 aggtggaggg aacgcccagc gacgagcagc tgcagcagct gcgcgacggc gtgctgctca
     9961 atgacgggcc gacccttccg gcgaagatcg aacgcctcga tccagcacct tcgctgtgga
    10021 cacgtgatcc gcccgtgcgc ttccgcaaga ccgtgcccga tgcgtggctg gcgatcacga
    10081 tccgcgaggg ccgcaatcgc caggtgcggc ggatgaccgc ggcggtgaac ctgccgacac
    10141 tacggctggt gcggatggcg atggggccgt accggctgga cgacctgcaa ccggggcagt
    10201 ggcggcagat cggctgaaca cacccgcaga aatggaaagg gccggagcgc ctcccgtgga
    10261 agcggtccgg ccctggcaac gcgcaatgcc tcaggcgtcg ctgccgatgt cgctatgctc
    10321 gtcaaccacg gtggcattgc ggcggtcacg tgcgctgatg cgctgcgcct gcccattcac
    10381 cacgtggcca ttggcggcct tcttcttctg ctgcttgcgg tacagcgcat agcccagcag
    10441 gccgacaccc accgcggctg cggccacggc caccgccggg ttgcggcgca cgaacttggt
    10501 ggcggccttg ccgccagtct tcactgcgcc gatggcggca ccggtcttga tccagtccgc
    10561 attgcgcagg ctgccaccgg cgctcttcag gccatcgccg gcggtgtggg ccagctccag
    10621 ggcgcgctcc agggcgcggt cggtgattac agtcagcttg ctcatgcggg ggtcctttgc
    10681 ctcgggtcga agtccagtgt cgcgtgttgc ccgtaaacgg tatgtcaggc ggggtcacac
    10741 gtggcgtgac tccagcgcag ccattcagga tcaggcaggg tctgcagccg gcacgaccgg
    10801 tcaggtcccg cgcggcttgg cccggtgcgt ggcggtggcc gtccatggat catccggcca
    10861 cggatggcgc gggtaacggc ccttcatttc cttcttcact tcggcgtagg tgttttccca
    10921 gaaattgcgc aggtcctggg tgacctgcag tgggcggccg ccaggcgaga gcaggtgcag
    10981 ggtcaacggc acgcggccat cggcgatgcg tggggtgtcg gccaggccga acagttcctg
    11041 cagtttcacc gccagcaccg gcggcaaagg ttcgccgctc tcgctgtcca atgcgtaggt
    11101 gatcggccgc tccagtccgg acggcacggt gatgcgggtc ggcgcatgac gttcaaccag
    11161 ttgccgctgc gaccactcca agggcgactt cagcgcctcg ccgaaactgg cctcgtccag
    11221 cgcatccagg cggctctttc cggcgaacgc gggttgcagc cactgcgcgc ggttggccag
    11281 cagggcggcg tcgctgcaat cggacagttc cagctccggc atccagcgcc gcagcgattc
    11341 cacccgtgcc tgccactggc gcaggccttc ggtccacggc agcgcctgca ggccgagctc
    11401 ggccaccgcg tcggtcaacg cctgcgcggc gtgctgcgga tcgacacggc cggccgagcg
    11461 gctgtccagc acgatgcggt cgaaacgggt ctcgcgcagc gccaccaggg cgcgacgctc
    11521 gctgtcccag cgcaccacat cttcggtcac gaagcgttcc ggccacgccg tgcgcagctg
    11581 gccttcatcc accggcgcgg cgcgcagcag cagtgcatcg cgcgcctcga agcgcagttc
    11641 gctggcgacc agccagggct cgccgcgcag gtcgctcagt tcgtgcaggc gtgcactgcg
    11701 gccattggcc agcaggtagc gcagcggatc gttggggtgc tggacgccaa tgcggtctgg
    11761 gaaggcatgc gcaagcaggt cacccagttc atgcgcttcg atgctggagg gcggggtggc
    11821 ctcgcagcgc aggcgtcggc gccactgctt ggcggccgca tcgatggcgg ccagcccgct
    11881 gcggttggca tcgcccggcg cacggccatt gcggaacgcc gccagcgccc gccagcgtgc
    11941 cgccaacgcg tcaccgccct ggcgcagcgg atcgcgtgcc tccagcagtg cggccagatc
    12001 ggcggccagc gcctgcgcac gtgcatccgg cgcggccagc agcatcgccg ccatgcgtgg
    12061 atgcgtgccc agcgccagca cccggcgacc gagcgcggtg atcgcgccgg actcggacag
    12121 cgcgcccagt cgttgcagca gttcgcgtgc cgcgcccatc gggccagccg gcggcgggtc
    12181 gaggaagcgc aggtcgctgc tgccccaggc tgccagttcc agtgccagcc cggccagttc
    12241 cacctggtcg atctcggcgc ggcgctgtgg ttccagccgc tgcgactgcg gccacagccg
    12301 ccaggccacg ccctcggcca cgcgcccggc acggccggcg cgctggtcgg ccgaggcctg
    12361 cgcaatggcg accacatcca accgggtgaa gccgctgttg gggtcgtagc gcggttcgcg
    12421 tgcctggccg ctgtcgatca ccacgcgcac accgggcagg gtcaccgagg attcggccac
    12481 gttggtggcc agcaccacgc ggcggcggcc atcgctggcg gcctgcagta cgcgcgcctg
    12541 ctgctccacc ggcagttcgc cgtgcagggc cagcacctcg acacctgcat cgagagattc
    12601 ctgcaggccg gcctgcaccc gcgcgatttc gcgctggccg ggcaggaaca ccagcaggtc
    12661 accgggatgt tctgccagcg cctgctgcac cgcacggcgc acctgcagtt ccagtgcttc
    12721 gtcgcgacgc gccgggaaat ggctgatcgc caccgggtag ctgcggccct cgctgctcaa
    12781 gcgcggtgca tcgaggaagc gcgccagtcg ctcgccatcc agcgtggccg acatcaccac
    12841 caggcgcagg tcgtcgcgca gctgcgcctg cacgtccagc gccagtgcca ggcctaggtc
    12901 accactgaga tggcgttcat ggaattcatc gaacaggatc gcaccgacgt cttccagcat
    12961 cgggtcgtcc tgcagcatgc gggtcaggat gccttcggtg acgacctcga tgcgggtgcg
    13021 cgccgagacc ttgttctcga agcggatgcg gtagccgacc gtgccgccca cctcttcacc
    13081 cagctgccgc gccatgaaca gcgccgcgct gcgtgcggcc acccgcctcg gttccagcag
    13141 gatgatcttc cgcccctgca gccacggcgc atccagcagc gccagcggca cctgggtggt
    13201 cttgccggcg cccggcgggg cttccagcac cagccgcggc tgtgcggcca ggtgctgctg
    13261 gatctgcggc agcagtgggg agatcgggaa gagcggggcg ttcatgtgca aaggataagg
    13321 ggccacggcg ggcgcaggta caatgcgcgg gcacttttct cccgcgatga ccatgcatct
    13381 gatcgatatc ggcgccaacc tgacccacga ttccttcgac cgcgatcgcg atgccgtact
    13441 ggaccgcgcg cgccaggccg gcgtggtgca gatggtgatc accggcgcca gccgcgagca
    13501 ctcgccgctg gccctgcagc tggcgcagca gcatccgggt tttctgtatg ccaccgccgg
    13561 cgtgcacccg catcacgcgg tggagtacac cgaagagtgc gacgccgaga tgcgcgcgct
    13621 gcatgcccat ccggaagtag tggcggtggg cgagtgcggg ctggactact tccgtgattt
    13681 ctcgccgcgc cccgcccagc accgcgcgtt cgaacgccag ctgcagctgg ccgcagacaa
    13741 tggaaagcca ttgttcctgc accagcgcga cgcgcatgcc gatttcatgg cgcagatgaa
    13801 gaacttcgag gggcgcatcg gccccgcggt ggtgcattgc ttcaccggcg aacgcgatga
    13861 actgttcgat tacctggacc aggactggta catcggcatc accggctggt tgtgcgatga
    13921 gcgccggggc gcgcacctgc gcgagctggt gaagaacatc ccggccaacc gcctgatgat
    13981 cgaaaccgat gcaccatacc tgctgccgcg cacgctgaag ccgctgccca aggaccgccg
    14041 caacgaaccg atgttcctct cgcacatcgt ggaagaactg gcacgcgacc gaggcgaaga
    14101 cgtggtggtg accgccgcaa atgccaccgc cgccacgcgg gctttcttcc gcctgcccga
    14161 cgccggttga tcgggtggtg ccggccgctg gccggcagca gcatgaacgc cgcaaacatc
    14221 gc
//
LOCUS       DAOKIP010000096        14028 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.096,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000096 DAOKIP010000000
VERSION     DAOKIP010000096.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 14028)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14028)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14028
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.096"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(16..480)
                     /gene="greA"
                     /locus_tag="QEL58_002365"
     CDS             complement(16..480)
                     /gene="greA"
                     /locus_tag="QEL58_002365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014507602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreA"
                     /protein_id="HDS1676825.1"
                     /translation="MTMKGAQKLRDELDHLKSVKRPKVIAAIAEAREHGDLKENAEYH
                     AAREEQGFIEGRIKQLEGELSHAEIIDVSKLNAGSKVVFGASVTLADVETDEEKKYQI
                     VGDLEADIKLGLIAISSPVARAMIGKLEGDSIVIDAPAGQREYEIVSVSYVD"
     gene            complement(489..3731)
                     /gene="carB"
                     /locus_tag="QEL58_002366"
     CDS             complement(489..3731)
                     /gene="carB"
                     /locus_tag="QEL58_002366"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002806440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase large subunit"
                     /protein_id="HDS1676826.1"
                     /translation="MPKRTDLKTILIIGAGPIVIGQACEFDYSGAQACKALRDEGYRV
                     VLVNSNPATIMTDPEMADAVYIEPINWQTVEKIIAKEKPDALLPTMGGQTALNCALDL
                     ADHGVLEKYNVELIGAKREAIRMAEDRELFRVAMGEIGLECPTAAVAHTLDEALEIQT
                     RVGYPTIIRPSFTLGGSGGGIAYNREELVEIVSRGLELSPTTEVLVEESVLGWKEFEM
                     EVVRDTADNCIIVCSIENLDPMGVHTGDSITVAPAQTLTDKEYQRLRDASIAVLRKIG
                     VDTGGSNVQFGINPKTGRVVVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDE
                     LKNEITGGLTPASFEPSIDYVVTKIPRFAFEKFPAADARLTTQMKSVGEVMAMGRTFQ
                     ESVQKALRGLETGKVGFDPTGLDLANEEDLQTLRRELKAPGPERLFFVADAFRAGMSV
                     EEIYALSFIDHWFLDQIEEIIAAEAEVTAGGIDALDAARLRKLKRAGFSDARLAQLTG
                     TNEAAIRALRRAHKVRPVYKRVDSCAGEFSTGTAYLYSTYEDECEAAPTNRDKIMILG
                     GGPNRIGQGIEFDYCCVHAALALREDGYETIMVNCNPETVSTDYDTSDRLYFEPLTLE
                     DVLEIVELEQPKGVIVQYGGQTPLKLARALEANGVPVIGTSPDSIDLAEDRERFQQLV
                     DTLGLKQPPNRIARNDQEALLLAREIGYPLVVRPSYVLGGRAMEIVYGESDLARYVRD
                     AVKVSNDSPVLLDRFLDNAVECDVDIIADKEGNVLIGGVMEHIEEAGVHSGDSSCSLP
                     PYSLSAKTQAELRRQVVELAKALNVVGLMNTQFAIQTSEEGDDTIYLLEVNPRASRTV
                     PFVSKATGMPLAKIAARCMAGTTLAEQGATKEIVPDYYSVKEAIFPFAKFQGVDPILG
                     PEMRSTGEVMGVGRTFNAAFARAQEAGGIKAPPVGKAFVSVRDPDKKRVLPVAKALLA
                     RGYSLVATRGTAAWLQQHGMDCEIINKVVEGRPHIVDSIKNGEIVYIVNTTEGRSAIN
                     DSFSIRREALQHRVTYSTTIAGAKALVDSLEFRGTGPVWSLQELHKELNA"
     gene            complement(3881..5008)
                     /gene="carA"
                     /locus_tag="QEL58_002367"
     CDS             complement(3881..5008)
                     /gene="carA"
                     /locus_tag="QEL58_002367"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005416375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing carbamoyl-phosphate
                     synthase small subunit"
                     /protein_id="HDS1676827.1"
                     /translation="MTQAAILVLEDGTVFEGESVGAPGLSVGEVVFNTAMTGYQEVLT
                     DPSYARQMVTLTYPHIGNTGMTDQDNEASKVWSAGLIVRDVPRRPSNWRSQVSLQDWL
                     IQRGVVAIAGIDTRKLTRILREKGAQNGALMAGDIDVEKALEAARKFPGLKGMDLAKV
                     VTTEKTYTWTEGQLDLDANAFVSVPAKFKVVAYDFGVKINILRMLAERGCEVTVVPAQ
                     TPAAEVLALKPDGVFLSNGPGDPEPCDYAIEAIKAFIDVKIPTFGICLGHQLLGLASG
                     AKTMKMGHGHHGANHPVQDLDNGRVMITSQNHGFAVDESTLPATLRVTHRSLFDGTNQ
                     GIARTDVPAFSFQGHPEASPGPTDVGPLFDRFVALMEQSKA"
     gene            complement(5318..6046)
                     /locus_tag="QEL58_002368"
     CDS             complement(5318..6046)
                     /locus_tag="QEL58_002368"
                     /EC_number="1.17.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010482525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate reductase"
                     /protein_id="HDS1676828.1"
                     /translation="MNQTPLRLLIHGASGRMGQALLRLAAEHPETLQIVAAVTGRAPA
                     QRVVDGVPFFAASELPGAPVFDVAIDFSLPEGFDPMLALCVERGAGLVSGTTGISSTQ
                     RQALEAAAAKIPLVWASNFSLGVAVLDELVERAAQALAGWDCDIVESHHTQKKDAPSG
                     TALTLGAAAQRGGALPHYASLRAGDIVGEHLVQFTGPGERIELVHRATNRDIFARGAL
                     FAARQLHGRAAGSYRVRDLLDGPR"
     gene            6119..6898
                     /locus_tag="QEL58_002369"
     CDS             6119..6898
                     /locus_tag="QEL58_002369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-ACP reductase"
                     /protein_id="HDS1676829.1"
                     /translation="MDGSSTMQISEQLVLVTGAGRGLGTHIARAFAAQGARVIVNYHR
                     SEATARALAAELGGQAIALPADVTDRAQVDAMLQQALAHFGQGVTTVVNNALASFSFN
                     GDARDSAADIGWPAFQAQFEGSVRGALNTVQAALPGMQARRFGRVINIGTNLFQNPVV
                     PYHDYTAAKAALLSLTRTLAGDLGPHGITVNMLSGGLLRTTDASAATPEAVFDYIAAN
                     TPLRSVTTPAEFADAALFFASPWSRAVTGQNLVVDGGLVRD"
     gene            6903..7298
                     /locus_tag="QEL58_002370"
     CDS             6903..7298
                     /locus_tag="QEL58_002370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019336244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HDS1676830.1"
                     /translation="MRISEVSRLTGASAKAIRLYEARGLLPPVPRVNRYRDYSEQDVA
                     WVQLIRQALALGITLGAVSRLQGGDGRLDWPAVLALLEQQRSRIACERARLEQVELDL
                     QQVSDELRQWLHSGSGDCVLQPSGCPVGA"
     gene            7366..7947
                     /locus_tag="QEL58_002371"
     CDS             7366..7947
                     /locus_tag="QEL58_002371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HDS1676831.1"
                     /translation="MSRSILILLGHPDRDSLCGALAQRYATAAENAGHRVRLIALGEL
                     EFDPVLRHGYRQIQPLEADLQDVADAIQACDHLVLVYPTWWGAMPALLKGLFDRVLLP
                     GYAFRYRRDSVWWDRLLAGRSARVITTLDTPPWYYRWIYRDPGIVQIRATILAFCGFR
                     PVKISRLGAVRSSTPAQRSSWLALAAELGSRAR"
     gene            8086..8547
                     /locus_tag="QEL58_002372"
     CDS             8086..8547
                     /locus_tag="QEL58_002372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014646988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4304 domain-containing protein"
                     /protein_id="HDS1676832.1"
                     /translation="MKSATVFSRCARKTGFAGTTTTRYRLLEGALLVVNHQRASEHRG
                     FYVNAGLYFPELLEYPLAPSDLETAFRYRSSIPTPHVDWRIEETPGLRRAFIQQDLDD
                     LLEAGNRDALKGLLLGALADVAGFAEAHGNRESVRRLNRDGNFRALIRREV"
     gene            complement(8654..8899)
                     /locus_tag="QEL58_002373"
     CDS             complement(8654..8899)
                     /locus_tag="QEL58_002373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676833.1"
                     /translation="MDSGLLLQYLIIAVAVLVSAWVVLKKQFPGTVRRVRGALALALL
                     KPGRAAWLQGLGRKIAPPATGGGGACGGCDSCGPTKK"
     gene            complement(8899..10764)
                     /locus_tag="QEL58_002374"
     CDS             complement(8899..10764)
                     /locus_tag="QEL58_002374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrous iron transporter B"
                     /protein_id="HDS1676834.1"
                     /translation="MTATASTAPLRVALVGNPNSGKTALFNQLTGSRQKVANYTGVTV
                     ERKEGRLRAPSGREFAVLDLPGAYSLQPASLDEAITRDLCRGFYPGEAAPDVLLCVID
                     ATNLRLHLRFALELRELGKPMVVALNMVDAAQRRGIQVDVAALERELGVPVVETVAVR
                     KQGAKALVERLDAMVPHLDAPVPGPEGGIDYHAKVRQILSVAVRMPARTAKIDDALDR
                     WLLHPVFGLVSLAVVMFLIFQAVYAWATPLMDAIEAGFAWLGAFVGSVLPEGPLASLL
                     TDGIIAGVGGVVVFLPQILILFFFILVLEESGYLPRAAFLLDRMMAAAGLSGRSFIPL
                     LSSFACAVPGIMSTRSIQDPRDRLATILVAPLMTCSARLPVYALLIGAFIPQKTVWGV
                     FNQQGLVLFGLYAAGILSALAMSWIMKKWRRDKSEHPLMLELPSYRLPHVRDLAVGLY
                     ERGMIFLKRVGGIILALTILLWVLLSFPAAPVGATMPAIDYSYAGQIGHAMAVFFAPL
                     GFNWQICIALIPGLAAREVAVSSLATVYALSAADDDAASQALTPLISDGWSLATALSL
                     LVWYIYAPMCISTLATIKRETNSWKTMAFSAFYLFAAAYVAALITYQVTRALGGG"
     gene            complement(10761..11015)
                     /locus_tag="QEL58_002375"
     CDS             complement(10761..11015)
                     /locus_tag="QEL58_002375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrous iron transport protein A"
                     /protein_id="HDS1676835.1"
                     /translation="MTLSELPLHTSAVVESVQDLHANDAIARRLRELGFVKGEEVRLV
                     AKGPVGGEPLLVQVGFTRFALRISEAKRVVVDAASQERRA"
     gene            11135..11923
                     /locus_tag="QEL58_002376"
     CDS             11135..11923
                     /locus_tag="QEL58_002376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HDS1676836.1"
                     /translation="MNDALQIERRGAVLTLWLNRPELHNAFDASLIARLTAALEAAGR
                     DDAVRAVVVAGHGASFSAGADMQWMRGMAAASEADNREDSLALARLMRTLDELPKPTL
                     ARVHGAAFGGGVGLVACCDIAIASTSARFGLTESRLGLLPAVISPYVIEAIGPRQARR
                     WFATGEHFDADTALRIGLVHQLVEPERLDEALERQLALLDKAGPIASSTAKQLVRQVR
                     DSHDRDALDRDNAALIARLRVSAEGQEGLGAFLDKRAPHWVTEA"
     gene            11926..12327
                     /locus_tag="QEL58_002377"
     CDS             11926..12327
                     /locus_tag="QEL58_002377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HDS1676837.1"
                     /translation="MLDHLGLTSADLARSKAFFLHALAPLQIGVVMEVTAEQSGAHDH
                     IGFGSDGKPFFWLGNGGTASHGVHVAFACASRAQVDAFHAAALAAGGRDNGAPGLRPW
                     YHPDYYGAFVLDPDGNNIEAVCHRPGSEVEA"
     gene            12324..13220
                     /locus_tag="QEL58_002378"
     CDS             12324..13220
                     /locus_tag="QEL58_002378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008571466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylglutaryl-CoA lyase"
                     /protein_id="HDS1676838.1"
                     /translation="MSDYVRIVEVGPRDGLQNEKQSVSTADKIELINRLSATGLRSIE
                     ATSFVSPKWIPQLADAAEVYAGIQRRPGVSYPVLVPNEQGYDRARAVGVEEVAVFTAA
                     SEAFNRTNTNAGIDESLARFEPILRRAAADGVRVRGYVSTVLGCPYQGEVPLADVVRV
                     ARALHQMGCYEISLGDTIGVGTPRKARAMLQAVAAEIPMPALAVHFHDTYGQAIANIA
                     TCLEEGVRVVDSAVSGAGGCPYAKGASGNVASEDVVYLLQGLGLDSGVDLPALAETGR
                     WLAGLLGRATASRTGQALAAAG"
     gene            13321..>14028
                     /locus_tag="QEL58_002379"
     CDS             13321..>14028
                     /locus_tag="QEL58_002379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014646983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HDS1676839.1"
                     /translation="MQLSSVRAVITGGVSGLGLAVAQHLVAQGGKVALFDLNDDKGAA
                     TVAELGADKARYFNVNVSDEAAVATAIDQAHDFLGGLNVAMNCAGILGAGRVLGKEGP
                     MPLAGFQGTVMVNLVGSFNVAKAAANRMQHNEAGTDGERGVIINTASIAAYEGQIGQA
                     AYAASKGGVVSMTLPMARELSRFGIRVNTIAPGVFWTPMVDGMPEAVQQSLAASIPFP
                     SRLGKPEDFASLVGFILG"
BASE COUNT         2211 a         4851 c         4662 g         2304 t
ORIGIN      
        1 gccgttgcca cctcgtcagt ccacgtagct gacgctgacg atctcgtact cgcgctggcc
       61 ggccggggcg tcgatcacga tcgaatcgcc ttccagcttg ccgatcatcg cgcgcgccac
      121 cggcgaggaa atggcgatca ggcccagctt gatgtccgct tccaggtcgc cgacgatctg
      181 gtacttcttc tcttcgtcgg tttccacgtc ggccagggtc acgctggcac cgaacaccac
      241 cttggagccg gcattgagct tgctcacgtc gatgatctcg gcgtgcgaca gctcgccttc
      301 cagctgcttg atgcggcctt cgatgaagcc ctgttcctcg cgcgcggcgt ggtactcggc
      361 gttctccttc aggtcgccgt gctcacgcgc ttcggcgatc gcggcgatca ccttcgggcg
      421 cttgaccgac ttcaggtgat ccagttcgtc gcgcagcttc tgcgcgcctt tcatggtgat
      481 gggggctctc atgcattcaa ctccttgtgc agctcctgca gcgaccagac ggggccggtg
      541 ccgcggaatt ccagtgaatc caccagcgcc ttggcgccgg caatggtggt cgagtaggtg
      601 acgcggtgct gcagcgcctc gcgacggatc gagaacgagt cgttgatcgc cgaacggcct
      661 tcggtcgtgt tgacgatgta gacgatctcg ccgttcttga tcgaatcgac gatgtgcggg
      721 cgaccttcga ccaccttgtt gatgatctcg cagtccatgc cgtgctgctg cagccatgcg
      781 gcggtgccac gggtggccac caggctgtag ccacgcgcca gcagggcctt ggccaccggc
      841 agcacgcgct tcttgtcggg atcgcggacc gaaacgaagg ccttgccgac cggcggcgcc
      901 ttgatgccac cggcttcctg cgcacgcgcg aaggcggcgt tgaaggtgcg gcccacgccc
      961 atcacttcac cggtggagcg catttccggc ccaaggatcg ggtcgacacc ctggaacttg
     1021 gcgaacggga agatcgcttc cttcaccgag taatagtccg gcacgatctc cttggtcgcg
     1081 ccctgctcgg ccagcgtcgt gccggccatg cagcgcgcgg cgatcttggc cagcggcatg
     1141 ccggtggcct tggacacgaa cggcacggtg cgcgaggcac gcgggttcac ttccagcagg
     1201 tagatggtgt catcgccctc ttcgctggtc tggatcgcga actgggtgtt catcaggccg
     1261 accacgttca gggccttggc cagctccacc acctggcggc gcagttcggc ctgggtcttg
     1321 gccgacagcg agtacggcgg cagcgagcag gacgagtcac ccgagtgcac gccggcttct
     1381 tcgatgtgct ccatcacgcc accgatcagg acgttgccct ccttgtcggc gatgatgtcc
     1441 acgtcgcact cgacggcgtt gtcgaggaag cggtccagca gcaccggcga atcgttggac
     1501 accttcaccg cgtcacgcac gtagcgggcc aggtcggatt caccgtagac gatttccatc
     1561 gcgcggccac ccagcacgta gctcgggcgc accaccagcg ggtagccgat ctcgcgggcc
     1621 agcagcagcg cttcctggtc gttgcgggcg atgcggttcg gcggctgctt caggcccagc
     1681 gtgtcgacca gctgctggaa gcgctcgcgg tcttcggcca ggtcgatgga gtccgggctg
     1741 gtgccgatca ccggcacgcc gttggcttcc agtgcacgtg ccagcttcag cggggtctgg
     1801 ccgccgtact gcacgatcac gcccttgggc tgttccagct cgacgatttc cagcacgtct
     1861 tccagggtca gcggttcgaa gtacaggcgg tcggaggtgt cgtagtcggt cgacacggtt
     1921 tccgggttgc agttgaccat gatggtttca taaccatcct cgcgcagcgc cagtgccgcg
     1981 tgcacgcagc agtagtcgaa ctcgatgccc tggccgatgc ggttcgggcc accgcccagg
     2041 atcatgatct tgtcgcggtt ggtcggcgcg gcctcgcact cgtcctcgta ggtcgagtac
     2101 aggtaggcgg taccggtgga gaactcaccg gcacaggagt ccacgcgctt atagaccggg
     2161 cgcaccttgt gcgcacggcg cagcgcgcgg atggccgctt cgttggtacc ggtcagctgg
     2221 gccaggcggg cgtcggagaa accggcgcgc ttgagcttgc gcaggcgcgc cgcgtcgagc
     2281 gcatcgatgc caccggcagt cacttcagct tcggccgcga tgatttcctc gatctggtcc
     2341 aggaaccagt ggtcgatgaa cgacagcgcg tagatctctt ccacgctcat gccggcgcgg
     2401 aatgcatcgg cgacgaagaa caggcgctcc gggcccggcg ccttcagctc gcggcgcagg
     2461 gtctgcaggt cttcttcgtt ggccaggtcc aggccggtcg ggtcgaagcc gaccttgccg
     2521 gtttccaggc cacgcagggc cttctgcacc gactcctgga aggtgcggcc catcgccatc
     2581 acctcaccca ccgacttcat ctgggtggtc aggcgggcat cggcagccgg gaacttctcg
     2641 aaggcgaaac gcggaatctt ggtgaccacg tagtcgatcg acggctcgaa cgaggccggg
     2701 gtcaggccgc cggtgatctc gttcttcagt tcgtccaggg tgtagcccac ggccagcttg
     2761 gccgcgacct tggcgatcgg gaagccggtg gccttggagg ccagcgccga ggaacgcgac
     2821 acgcgcgggt tcatctcgat gacgaccacg cggccggtct tcgggttgat gccgaactgc
     2881 acgttcgaac caccggtatc gacgccgatc ttgcgcagca cggcgatgga ggcatcgcgc
     2941 aggcgctggt attccttgtc ggtcagggtc tgcgccgggg ccacggtgat cgagtcaccg
     3001 gtgtgcacgc ccatcgggtc caggttctcg atcgagcaga cgatgatgca gttgtccgcg
     3061 gtatcgcgga ccacttccat ctcgaattcc ttccagccca gcaccgactc ttcgaccagc
     3121 acttcggtgg tcggcgacag ctccaggcca cggctgacga tctcgaccag ctcttcgcgg
     3181 ttgtaggcga tgccgccgcc gctgccgccc agggtgaagc tggggcggat gatggtcggg
     3241 taaccgacgc gggtctggat ctccagcgct tcgtccaggg tgtgggcgac ggcggcggtc
     3301 gggcattcca ggccgatctc gcccatggcc acgcggaaca gctcgcggtc ttcggccatg
     3361 cggatcgctt cgcgcttggc gccgatcagt tcgacgttgt acttctccag cacgccgtgg
     3421 tcggccaggt ccagcgcgca gttcagcgcg gtctggccac ccatggtcgg cagcagcgcg
     3481 tcaggctttt ccttggcgat gatcttctcg accgtctgcc agttgatcgg ctcgatgtag
     3541 acggcatcgg ccatctccgg gtcggtcatg atcgtggccg ggttgctgtt gaccagcacc
     3601 acgcggtaac cctcgtcgcg cagggccttg caggcctggg cgccggagta gtcgaactcg
     3661 caggcctggc cgatgacgat cgggccagca ccgatgatga ggatggtctt gaggtcagtg
     3721 cgcttgggca ttttcttctc taagtcagta cagcgtgaca aggggggtga tcgcacgctg
     3781 tcgatcagga atcttgatcc gcagcgccgc gccagcggca gcagcgatgc gggggcttac
     3841 ggtccatcgc gacgccaccg gcaagccggc gacgtactga tcacgccttg ctctgttcca
     3901 tcagggccac gaaacggtcg aacagcgggc cgacatcggt cgggccgggc gacgcttccg
     3961 ggtggccctg gaacgagaac gccggcacgt cggtgcgggc gatgccctgg ttggtgccgt
     4021 cgaacagcga ccggtgggtc acgcgcaggg tcgccggcag ggtcgattca tcaaccgcga
     4081 agccgtggtt ctgcgaggtg atcatcaccc ggccgttgtc caggtcctgc accgggtggt
     4141 tggcaccgtg gtggccgtgg cccatcttca tggtcttggc gcccgaggcc aggcccagca
     4201 gctggtggcc caggcagatg ccgaaggtcg ggatcttcac gtcgatgaag gccttgatcg
     4261 cttcgatggc gtagtcgcac ggttccgggt cacccgggcc attggacagg aacacgccgt
     4321 ccggcttcag cgccagcact tcggcggccg gggtctgcgc cggcaccacg gtcacttcgc
     4381 agccgcgctc ggccagcatg cgcaggatgt tgatcttcac gccgaagtcg taggccacga
     4441 ccttgaactt ggccggcacg ctgacaaagg cattggcgtc caggtccagc tggccctcgg
     4501 tccaggtgta ggtcttctcg gtagtgacga ccttggccag atccatgccc ttcaggcccg
     4561 ggaacttgcg ggcggcttcc agtgcctttt ccacgtcgat gtcgcccgcc atcagcgcac
     4621 cgttctgcgc gcccttctcg cgcaggatgc gggtcagctt gcgggtgtcg atgccggcga
     4681 tggcgaccac gccacgctgg atcagccagt cctgcagcga cacctggctg cgccagttgc
     4741 tggggcggcg cggcacgtcg cgcacgatca ggccggccga ccacaccttg gacgcttcat
     4801 tgtcctggtc ggtcatgccg gtgttgccga tatgcggata ggtcagcgtg accatctgcc
     4861 gggcgtagga cgggtcggtc aacacttcct ggtaaccggt catggcggtg ttgaacacca
     4921 cctcaccgac ggacaggccg ggcgcgccta cggattcgcc ctcgaatacg gtgccgtctt
     4981 cgaggacgag gattgcggct tgggtcacgg aaatctcact ttggctaccg agggggctgc
     5041 cgaagtcacg cctgcgcttc acggaaatcc ggttgcaaaa aagcgcggac gtacggtctg
     5101 ggaccggtcc ggctttcgtg attcggcgag tgcgaattgt agcgctgccg gggcgctcgc
     5161 gccagcggtt atcgctgttc atgaacaggc gattgcgcat tcatttcaat ccggcggcgt
     5221 atgcggggcc gccatgaccc cggtagatgc caaccttggt tggcaggctt tccgggaagc
     5281 gccaaccaag gttggcatct accatcgacc tggaccgtta ccgggggccg tccagcaggt
     5341 cccgcacccg gtagctgccg gccgcccggc cgtgcagctg gcgggcggcg aacagcgcgc
     5401 cgcgggcaaa aatgtcgcgg ttggtggcgc ggtgcaccag ctcgatgcgc tcaccggggc
     5461 cggtgaactg caccagatgc tcgccgacga tatcgccggc acgcaggctg gcgtagtgcg
     5521 gcagcgcccc accccgctgc gcggccgccc ccagggtcag cgcggtgccc gacggcgcgt
     5581 ccttcttctg ggtgtggtgc gattcgacga tgtcacagtc ccagccggcc agcgcctgtg
     5641 cggcgcgctc gaccagctcg tccagcaccg ccacgcccag gctgaagttc gaggcccaga
     5701 ccagcgggat cttcgctgcc gcggcctcca gcgcctggcg ctgcgtactg gagatgccgg
     5761 tggtacccga caccaggccc gcgccccgct ccacgcacag cgccagcatc gggtcgaaac
     5821 cctccggcag gctgaagtcg attgccacat cgaacaccgg cgcgccgggc agctcgctgg
     5881 cggcgaagaa cggcacgccg tcgaccacgc gctgggccgg cgcgcggccg gtcaccgccg
     5941 ccacgatctg cagggtttcg gggtgttcgg cggccagccg cagcagggcc tggcccatgc
     6001 gcccggaggc gccgtgaatg agcaatcgca ggggagtctg gttcatgccc gcaggctagc
     6061 ggcagcgcac ccgctccggc aagcgccatc gctgctacgc tgcatgccct ttcacgcaat
     6121 ggatggcagt tccaccatgc agatcagcga acaactggtg ctggtcaccg gcgccggccg
     6181 cggccttggc acgcacattg cccgcgcctt cgccgcgcag ggtgcgcgcg tcatcgtgaa
     6241 ctaccaccgc agcgaggcca ccgcacgggc cctggctgcc gaactgggcg gacaggcgat
     6301 cgcgctgccg gccgacgtca ccgatcgcgc ccaggtcgac gccatgctgc agcaggcgct
     6361 ggcgcacttc ggccagggcg tcaccaccgt ggtcaacaac gcgctggcga gcttctcgtt
     6421 caatggcgat gcgcgcgaca gcgctgccga tatcggctgg ccggccttcc aggcccagtt
     6481 cgagggcagc gtgcgtggcg cgctcaacac cgtgcaggcc gccctgcccg gcatgcaggc
     6541 gcgccgtttc ggccgcgtca tcaacatcgg caccaacctg ttccagaacc cggtcgtgcc
     6601 ctaccacgac tacaccgcgg ccaaggccgc gctgctgtca ctgacccgca ccctggccgg
     6661 cgacctcggc ccgcatggca tcaccgtcaa catgctgtcc ggcgggctgc tgcgcaccac
     6721 cgatgccagc gctgccacgc ccgaggcggt gttcgactac atcgccgcca acaccccgct
     6781 gcgcagcgtc accaccccgg ccgagttcgc cgatgcggcg ctgttcttcg ccagcccctg
     6841 gtcacgcgcg gtgaccggcc agaacctggt ggtcgatggc gggctggtgc gggactgagc
     6901 cgatgcgcat ctccgaggtc agtcgcctga ccggcgccag cgccaaggcc atccgcctgt
     6961 acgaggcgcg cggcctgctg ccaccggtgc cgcgcgtgaa ccgctaccgc gactacagcg
     7021 agcaggacgt ggcctgggtg cagctgatcc gccaggcgct ggcactgggc atcaccctgg
     7081 gggcggtctc ccggctgcag ggtggcgatg ggcggctgga ctggccggcc gtgctggccc
     7141 tgctggagca gcagcgcagc cgcattgcgt gtgagcgcgc acggctggag caggtcgagc
     7201 ttgacctgca gcaggtcagc gacgaactac ggcagtggct gcactccggc agtggcgact
     7261 gcgtcctgca acccagcggc tgccctgtcg gcgcctgacc cggcgtttga ctctgcccct
     7321 ggggcatagc ccaacctcgc gcactttcca ttgcccgagg ttgtcgtgtc ccgttccatc
     7381 ctgatcctgc tcggccatcc cgaccgtgac agcctgtgcg gcgccctcgc ccagcgctac
     7441 gccaccgctg ctgaaaacgc cggccaccgg gtgcgtctga tcgccttggg tgaactcgaa
     7501 ttcgacccgg tactgcgcca cggctaccgc cagatccagc ccctggaagc cgacctgcag
     7561 gacgtcgccg atgcgatcca agcctgcgat cacctggtgc tggtctatcc cacctggtgg
     7621 ggcgcgatgc cggccctgct gaagggcctc ttcgaccgcg tgctgctgcc ggggtacgcc
     7681 ttccgctacc ggcgcgattc ggtgtggtgg gaccggctgc tggccggccg cagcgcacgg
     7741 gtgatcacca ccctggacac accgccctgg tattaccgct ggatctaccg cgacccgggc
     7801 attgtgcaga tccgcgccac catcctggcg ttctgcggct tccgcccagt gaagatcagc
     7861 cgcctcggtg cggtgcgcag cagcacgccg gcgcaacgca gcagctggct ggcgctggca
     7921 gcggagctgg ggtcccgcgc caggtaggtc cacgccatgg gcaaggcgtg cgaaccaagg
     7981 ttcgcaccca cctggggcgc tcgttgcgcg tgtcgcgttt gccaattgac ccccgcgcac
     8041 ggcgcgacaa ggctgtgggc ccttcctcca gcccaggcgg gccccatgaa atccgcgacg
     8101 gtcttcagca gatgcgcaag gaagacaggc tttgccggga ccaccaccac ccgctaccgg
     8161 ctgctggagg gcgccctgct tgtcgtgaat caccaacgcg ccagcgaaca ccggggcttc
     8221 tatgtgaatg ccgggctcta ctttccagag ctgcttgagt atccgcttgc gccttccgac
     8281 ctggaaactg cgttcaggta ccgctccagc attcccacgc cgcatgtcga ctggcggatc
     8341 gaagagacgc ccggcctgcg ccgggccttc atccagcagg atctggatga tctgcttgag
     8401 gccggcaatc gtgatgcgct gaaaggcctg ctgctcggtg cccttgccga tgtggcgggc
     8461 ttcgcggaag cccacggaaa ccgcgagtcg gtgcggcgat tgaatcggga cggaaacttc
     8521 cgcgcactca tccgcaggga ggtctgaacc cgggaggcgt gcgaaccaag gttcgcaccc
     8581 accgggtgaa gttcgcaccc accgcggcga atgttcgcac ccaccgtgcg gccaccgtcg
     8641 agcaagctcg acgctacttc ttggtcggcc cgcagctgtc gcaaccgcca catgcgccac
     8701 cgccgcccgt cgccggcggc gcgatcttcc ggcccagccc ctgcagccag gcagcacggc
     8761 ccggcttcag cagggccagc gccagtgcgc cgcgcaccct gcgcacggtg cccgggaact
     8821 gcttcttcaa caccacccag gcgctgacca gcacggccac cgcgatgatc aggtattgca
     8881 gcagcaatcc gctgtccatc agccgcctcc cagcgcccgg gtcacctggt aggtgatcag
     8941 cgccgccacg taggccgcgg cgaacaggta gaacgccgaa aaggccatcg tcttccacga
     9001 attggtttcg cgcttgatgg tggccagcgt cgagatgcac atcggggcgt agatgtacca
     9061 gaccagcagc gacaatgcgg tggccagcga ccagccgtcg ctgatcagcg gggtcagcgc
     9121 ttggctggcg gcatcgtcat cggccgccga cagcgcgtac acagtcgcca gcgaggacac
     9181 ggccacttcg cgcgcggcca ggcccgggat cagcgcgatg cagatctgcc agttgaagcc
     9241 cagcggcgcg aagaacaccg ccatcgcgtg gccgatctgg ccggcgtagc tgtagtcgat
     9301 ggccggcatc gtggcgccca ccggcgccgc cgggaacgac agcagcaccc acagcaggat
     9361 ggtcagcgcc aggatgatgc cgccgacgcg cttgaggaag atcatgccgc gctcgtacag
     9421 gcccaccgcc aggtcgcgca catgcgggag gcggtacgac ggcagctcca gcatcagcgg
     9481 atgctcgctc ttgtcgcgac gccacttctt catgatccac gacatcgcca gcgcactgag
     9541 gatgccggcc gcgtacaggc cgaacagcac caggccctgc tggttgaaca cgccccagac
     9601 ggtcttctgc gggatgaacg caccaatcag cagcgcgtac accggcaggc gcgccgagca
     9661 ggtcatcagc ggcgccacca ggatcgtggc caggcggtcg cgcgggtcct ggatgctgcg
     9721 ggtggacatg atgcccggca ccgcacaggc gaagctggac agcagcggga tgaacgagcg
     9781 gccggacagg ccggctgccg ccatcatgcg gtcgagcagg aaggccgcac gcggcaggta
     9841 gccggactct tccagcacca ggatgaagaa gaacaggatc aggatctgcg gcaggaacac
     9901 caccacgccg ccgacgccgg cgatgatgcc gtcggtcagc aggctggcca gcggcccttc
     9961 cggcagcacg ctgccgacga aggcgccgag ccaggcgaag ccggcctcga tggcatccat
    10021 cagcggcgtt gcccaggcgt agaccgcctg gaagatcagg aacatcacca ccgccaggct
    10081 gaccaggccg aacaccgggt gcagcagcca gcggtccagc gcgtcgtcga tcttggcggt
    10141 acgtgccggc atgcgcacgg ccaccgacag gatctggcgc accttggcgt ggtagtcgat
    10201 gccgccttcc gggcccggca ctggtgcatc caggtgcggc accatcgcat ccaggcgctc
    10261 gaccagcgcc ttggcaccct gcttgcgcac cgccacggtt tccaccaccg gcacgcccag
    10321 ctcgcgctcc agcgcagcca catcgacctg gatgccgcgg cgctgggcgg catcgaccat
    10381 gttcagcgcc accaccatcg gcttgcccag ctcgcgcagc tccagcgcga agcgcaggtg
    10441 caggcgcagg ttggtggcat cgatcacgca cagcagcacg tccggcgcgg cttcgcccgg
    10501 gtagaagccg cggcacaggt cgcgggtgat cgcctcgtcc aggctggccg gttgcaggct
    10561 gtaggcgccc ggcaggtcga gcacggcgaa ttcacggccg gacggcgcgc gcaggcggcc
    10621 ttccttgcgt tcgacggtga cgccggtgta gttggcgacc ttctgccggc tgccggtcag
    10681 ctggttgaac agggcggtct tgccactgtt cgggttaccg accagcgcga cgcgcagggg
    10741 ggcggtggag gcagtagcgg tcatgcacgt cgttcctggc tggcggcgtc aaccacgacg
    10801 cgcttggctt cactgatgcg cagcgcgaac cgggtgaacc cgacctgcac cagcagcggc
    10861 tccccgccta ccggaccctt ggccaccagg cgcacttcct cgcccttgac gaaacccagc
    10921 tcgcgcaggc gacgggcaat ggcatcgttg gcatgcaggt cctgcacgga ttcgaccacg
    10981 gccgaggtgt gcagcggcag ttcggacagc gtcatctagc gtaatctctg ctggatgtaa
    11041 atggttctcg attctaacat tcccgcgtcg cgtcatggcc catgaccaat ggcccgctat
    11101 gatccataca ggtatggagt gatcctggaa tcccatgaac gatgctttgc agatcgagcg
    11161 ccgtggcgcc gtcctcaccc tctggctgaa ccggccggag ctgcacaacg cctttgacgc
    11221 cagcctgatc gcccggctga ctgccgcgct ggaagccgcc ggccgcgatg atgcggtccg
    11281 cgcggtggtg gtggccggcc acggcgcctc cttctcggcc ggggccgaca tgcagtggat
    11341 gcgtggcatg gccgccgcca gcgaggcgga caaccgcgag gactcgctgg ccctggcaag
    11401 gctgatgcgc accctggacg agctgcccaa gccgaccctg gcccgggtcc acggcgcagc
    11461 cttcggcggt ggtgtcggcc tggtcgcctg ctgcgacatc gccatcgcca gcacctcggc
    11521 ccgcttcggc ctgaccgaaa gccgcctcgg cctgctgccg gcggtgattt cgccctacgt
    11581 gatcgaggcc atcggcccgc gccaggcccg gcgctggttc gccaccggcg agcacttcga
    11641 cgccgatacc gcgctgcgca tcggcctggt ccaccagctg gtcgagcccg agcgcctgga
    11701 cgaggcactg gaacgccagc tggccctgct cgacaaggcc ggcccgatcg cctcgtccac
    11761 cgccaagcag ctggtccggc aggtccgcga cagccatgat cgcgacgcgc tggatcggga
    11821 taatgccgcg ctgatcgcgc gcctgcgggt ctccgccgag ggccaggaag gcctgggcgc
    11881 gttcctcgac aagcgcgccc cccactgggt cacggaagcc tgaacatgct cgatcatctt
    11941 ggtttgacca gcgccgacct ggcgcgcagc aaggcctttt tcctgcacgc gctggcgccg
    12001 ctgcagatcg gcgtggtgat ggaagtgacc gccgaacaga gcggcgccca cgaccacatc
    12061 ggtttcggta gcgacggcaa gccgttcttc tggctcggca atggcggcac cgccagccac
    12121 ggcgtgcacg tggccttcgc ctgcgccagc cgcgcgcagg tggacgcctt ccatgccgcc
    12181 gccctcgccg ccggcggccg cgacaatggc gcccccggcc tgcgcccgtg gtaccacccg
    12241 gattactacg gcgccttcgt gctcgacccg gacggcaaca acatcgaagc ggtctgccac
    12301 cgccccggct ccgaggtaga ggcatgagcg actacgtccg catcgtcgaa gtcggtccgc
    12361 gtgacggcct gcagaatgaa aagcagtcgg tgtccaccgc cgacaagatc gaactgatca
    12421 accgcctgtc ggccaccggc ctgcgcagca tcgaggcgac cagcttcgtc agcccgaagt
    12481 ggatcccgca gctggccgat gccgccgagg tctatgccgg catccagcgc aggcccggtg
    12541 tcagctatcc ggtgctggtg ccgaacgaac agggctacga ccgtgcccgc gcggtcggcg
    12601 tggaggaagt ggcggtgttc accgccgcct ccgaagcgtt caaccgcacc aacaccaatg
    12661 ccggcatcga cgagtcgctg gcccgtttcg agccgatcct gcgccgggcc gccgccgatg
    12721 gcgtgcgtgt gcgcggctat gtgtccaccg tgctcggctg cccctaccag ggcgaagtac
    12781 cgctggccga cgtggtgcgc gtggcccgtg ccctgcacca gatgggctgc tacgaaatct
    12841 cgctgggcga caccatcggc gtcggtaccc cgcgcaaggc gcgggcgatg ctgcaggcgg
    12901 tcgccgccga gattccgatg ccggcgctgg ccgtgcactt ccacgacacc tacggccagg
    12961 ccatcgccaa catcgccacc tgcctggaag aaggcgtgcg cgtggtcgac agcgccgtgt
    13021 ccggcgccgg tggctgcccg tatgccaagg gcgccagcgg caacgtcgcc agcgaagacg
    13081 tggtctacct gctgcagggc ctgggcctgg acagcggcgt ggacctgccg gcactggccg
    13141 agaccggccg ctggctggcc ggcctgctcg gccgcgccac cgccagccgc accggacagg
    13201 cgcttgccgc cgccggctga ccgccgcacc gcgccgccac gcaaaggcgg cgcagtgcac
    13261 aacagcgacg gtcgtggctt ccgttagaat cggcggttct cgaacctgca ggaccgttca
    13321 atgcagctgt cttccgtacg tgccgtgatc actggcggcg tctccgggct cggcctggcc
    13381 gtggcccagc acctcgtcgc ccagggcggc aaggtggccc tgttcgacct caacgacgac
    13441 aagggcgcag ccaccgttgc cgaactgggc gccgacaagg cccgctattt caacgtcaac
    13501 gtcagcgatg aggcggccgt ggccaccgcc atcgaccagg cccacgattt cctcggtggc
    13561 ctgaacgtgg cgatgaactg cgccggcatc ctcggcgccg gtcgcgtgct gggcaaagag
    13621 ggcccgatgc cgctggccgg cttccagggc acggtgatgg tcaacctggt cggcagcttc
    13681 aacgtggcca aggccgcggc caaccgcatg cagcacaacg aggccggcac cgacggcgag
    13741 cgcggcgtga tcatcaacac cgccagcatc gccgcctatg aaggccagat cggccaggcc
    13801 gcgtatgccg ccagcaaggg cggcgtagtc tcgatgacgc tgccgatggc acgcgaactg
    13861 tcgcgcttcg gcatccgcgt caacacgatt gcgccgggcg tgttctggac gccgatggtc
    13921 gacggcatgc ccgaagccgt gcagcagtcg ctggccgcct cgatcccgtt cccgtcgcgc
    13981 ctgggcaagc cggaagactt cgccagcctg gtcggcttca tcctcggc
//
LOCUS       DAOKIP010000097        14019 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.097,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000097 DAOKIP010000000
VERSION     DAOKIP010000097.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 14019)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14019)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14019
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.097"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(83..967)
                     /locus_tag="QEL58_002380"
     CDS             complement(83..967)
                     /locus_tag="QEL58_002380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014648095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HDS1676840.1"
                     /translation="MAAAPAVLPPPPREAQRLGATIALSVVVHALLILGVGFAVKGDA
                     PLVPTLEVIFSQTRTALTPKQADFLAAASQEGGGEHDRAQRPRDNQAGIVPQAQAGVS
                     PVPQQQQSAAPAPPPQARVVSSRNGQDTVAQAQARPTPEQPEPDAPLSAREQRDVEMA
                     RLAAEVHLRSAQYAKRPNRKFVSASTREYAYANYLRAWVDRAERVGNLNYPDEARQRR
                     LGGQVVISVGVRRDGSVESSRILRSSGTPLLDEAALRVVKLAQPFPPLPKTDDAIDIL
                     QVTRTWVFLPGGTLHDDR"
     gene            complement(967..1914)
                     /gene="gshB"
                     /locus_tag="QEL58_002381"
     CDS             complement(967..1914)
                     /gene="gshB"
                     /locus_tag="QEL58_002381"
                     /EC_number="6.3.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012511876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione synthase"
                     /protein_id="HDS1676841.1"
                     /translation="MPLNVIVVMDPIAHIKIAKDTTFAMLLEAQRRGHALHYVRPGGL
                     ALEGGVAVAQTAPLQVRDDPSGWYELGTFSRTEFGSGQIVLMRKDPPVDAEYIYDTQV
                     LDVAAAAGACVVNNPQGLRDYNEKLAALLFPQCCPPTLVSRDAKALKAFALEHGQAVL
                     KPLDGMGGRSIFRSGQGDPNLNVILETLTDGGRKLALAQKFIPDITAGDKRILLVDGE
                     PVDYCLARIPQGDEFRGNLAAGGRGEGRPLSERDRWIAAQVGPEMKRRGMRFVGLDVI
                     GDYLTEVNVTSPTCVRELDAQYGLNIAGTLFDALEAGLR"
     gene            2155..2556
                     /gene="pilG"
                     /locus_tag="QEL58_002382"
     CDS             2155..2556
                     /gene="pilG"
                     /locus_tag="QEL58_002382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005913706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twitching motility response regulator PilG"
                     /protein_id="HDS1676842.1"
                     /translation="MTENTTAGGELAGLRVMVIDDSKTIRRTAETLLKREGCEVVTAT
                     DGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIKGNQLFKATPVIMLSSKDGLFDK
                     ARGRIVGSEQYLTKPFTREELLGAIRTYVNA"
     gene            2575..2937
                     /locus_tag="QEL58_002383"
     CDS             2575..2937
                     /locus_tag="QEL58_002383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006385332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HDS1676843.1"
                     /translation="MARIVLIEDSPTDRAVFTQWLRRAGHEVLEADNAEDGLQLVRDQ
                     VPQLVLMDVVLPGMSGFQATRAMARDAAIKHIPVIIVSTKAMETDKAWGLRQGAADYI
                     VKPPREDELIARINELVA"
     gene            2937..3467
                     /locus_tag="QEL58_002384"
     CDS             2937..3467
                     /locus_tag="QEL58_002384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014508568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheW"
                     /protein_id="HDS1676844.1"
                     /translation="MRSPFDILEAYERRSLAHAVQLPERQFALDLWRGVGYRVGQRRL
                     VSDFREVVEIVPMPPVTPVPCAQPWLLGVGNLRGNLFPVVDLKYFLEGTRTVQQEGQR
                     VLIMRQAGGDVALTIDELFGQRSFELDQQIAAGTLAEGRYGHFVDRAFHADGHDWGVF
                     SLSLLSRTPEFRQAAA"
     gene            3509..5545
                     /locus_tag="QEL58_002385"
     CDS             3509..5545
                     /locus_tag="QEL58_002385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005988635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HDS1676845.1"
                     /translation="MSTASDATKSGKLRLGGSNLWLFLLLASMILFGVNTGVATWQGS
                     RLADAGSKAADLQVLSQQLANQGRDAVGGNAQAFTAFKATRNAIEQNVSTLQGRYGKE
                     PGVSGAIATLGETWAPLGKQAGQLVASEPAVLALAGNANNFTGAVPGLQAQLNELVRA
                     MSASGAPSAQVYSALQQVVVAGSMARRVTEMRAGGSAAANAGDALARDITVFSQVLDG
                     LRNGNDELGITAVRGAAAIAALEQSQQKWEAMKQDADAILASSRQLFAAQSAATALGQ
                     GSAHMLDDSRKLFEAFSSFGSVSDTRLFPNFWIGVVSGALSLIAIIGFVSTNVRSRSR
                     EQELRYQTQVEFNSRNQQAIMRLLDEISSLGEGDLTVKASVTEDMTGAIADAINYAVD
                     ELRHLVTTINDTSAKVALSTQETQATAMQLAEAAGHQANQITSASDRIGEIAASIEQV
                     SRNSAESADVAQRSVVIAAEGAGVVRETIQGMDQIRDQIQETSKRIKRLGESSQEIGS
                     IVELINDISEQTNILALNAAVQAASAGEAGRGFAVVADEVQRLAERTSGATRRIENLV
                     QAIQADTNEAVTSMEQTTAEVVSGARLAEDAGTALTEIERVSNALNTLIKNISIAAQQ
                     QSAAASDITRTMGVIRQITGQTSQGAGQTAESIGHLAQLAADLRRSVADFKLPA"
     gene            5646..12206
                     /locus_tag="QEL58_002386"
     CDS             5646..12206
                     /locus_tag="QEL58_002386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005414250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hpt domain-containing protein"
                     /protein_id="HDS1676846.1"
                     /translation="MSSLRDAMSHAALGWVKPELDETLRQVRNEVEYYAEDPSDASRM
                     RICAGFLHQVQGTLRMVELYAPAMVAEELEQLANAIGAGRVADRDEACATLMRGSVLL
                     PDYLERLQNGHRDIPIVLMPLLNEIRAARGEDGVHDSVLLAFAPDSVTATEAELDHAR
                     GSLSGRNRELLDTVGSAVKEELLRIKDALDLHLRTGGAPEQLQTQANELGAVADTLGM
                     MGLGVARGVVVQQRDALRGVVEGRQQIDENLLLDIAGALLYVDASLDDQVAHLGAGGS
                     GEDDPSAVENRRTVEVLAHEAIANFAAAREHFVAFIETSWNHAELQDVPRLLGDVAGA
                     LRMLDLGTAADYLRGVQQYIEAELIGRQRVPSGRQLDTLADAMASLEYYLEALRDRRP
                     GREDILDITRSSLEALRYWPLPDRNAVEPASFAAQPVEREPVALQAEALQPERIEIPV
                     QPAAPAAGTVPVPLPDFTFDPPPVAPAPEVVDNRLMFGALGSAAIDAATAPLSLQDDA
                     EAPLVFAASSAPAPDVPQWDLAPFHPDADPLDAAGDERSPTFASFDPVSFEQGDAGQG
                     AAAQWTLSEAVPSAQADAVAVDADEDAGATAGIDPDAHAAPVFDPVAAEHDAVAAHDD
                     VVFRFDADALDNADDVLSLHAMETLSLDEDAGLHPSLEIVDAGPAALSDEAPAVAGLD
                     AAPADAPAVSVIDIDTIAPIDFSEADAQFFAELSAAAADFNPQAVAAPTVAEASVTTD
                     AEAGFEAGFDDDAENIDEDIREVFLEEFDDELTNLGTLLPAWRMQPDNMDRLRPIRRI
                     FHTLKGSGRLVGARTLGEFAWKIEGMLNRVLDGSRPASPAVLAMVDNAHAALPQLNAA
                     LRHGQRISVDLQAMQAIADRVGAGEETYYVPLPVAAAPVAPVLETEAEGEDEISRILE
                     AEAIASVHADAEVAPEAVGTPANIDSVLREILEAEVEVHQATLQDWLRSAQQAPQPVS
                     DALLRAVHTMNGAFAMTEVPEITAVTGGAESYIKRALAADVVPGDEGVAALDATAQAI
                     TATMEALQAEQPRIAPQEALVQRLQALAGELPEARWPMVGLEDEDDDLALEAEAASEA
                     AADTQAAEVADAAAAEADEPELEPRAAEVQAAESTDAIGAGLETAELTGSDDLSRYFD
                     AGWPAVPAEGDAASVDIGSIESIQPVEHAPLAAVAEADAAPTPDAEADLTAADDLSPY
                     LDASALPVDDRDADELPVVAEAVAIDLNTQSSADGLDSEDRFIDEAAALPLDSGLSSL
                     QDEMAAPGFAEPVTLAAALEAGLHVIDEEQTLDDDGQWPVLGLQASELAPGEADAFAE
                     DADVGGEAAVGEGESADQPSPATVDGHPAVDVAAPVRFFELEEAPGQATVPADVEPVE
                     IDLVPSAPVHVEAVAGEEGTDSAEALDFSVYDRELVDIFVEEGKDLLDHCDGLISELR
                     DAPQDREVLAGLQRDLHTLKGGARMAGINAIGDLGHSIESLLEAVAAGRTEIERRDVQ
                     LLERGFDRLHQLLTRTGAHRVVEPAQDLVDAFDVRTTTDIAAAAAVHAVSVDQSVPAP
                     ADSPSTAVVDAPLSAPLPIEGMVEEDPLARPQQEQVRVRADLLDRLVNHAGEVAIYRS
                     RLEQQLGAFRGAMGELERTNARLRDQLRRLDLETEAQIVARYQREQDQADQKFDPLEL
                     DRFSTLQQLSRALNESAADLGGLQGVLDDLSRQYDSLLQQQSRVSSELQDGLMRARMV
                     PFDGLVPRLRRVVRQSGLDTGKQVHLTLEGTHGELDRNVLDRMVAPLEHMLRNSVAHG
                     LEAPEQRRAAGKPEEGEIAIRLHREGSEIVLEVADDGAGLDREAIRRRAIDRGLLAAD
                     AQPNEQELDNLIFASGFTTADQVSQLAGRGVGMDVVRNEVRQLGGSVDIQSVRGQGVR
                     FTLRLPQTLAVTQAVFVQIGETTFAVPVASVSGIGRLSRERFEAADSSYRYSGEDYPL
                     YDLGTLVGQAPARADGQDQVPLLLVRAGDLRAAVAIDQVLGNREIVVKPVGLQIASVP
                     GIYGATITGDGRVVVILDVAPLVRRFLANPTLPVLANAPRQERQVPLVMVVDDSLTMR
                     KVTGRILERHNFEVSVARDGVEALERLEERVPDLMLLDIEMPRMDGYELATAMRADPR
                     YREVPIVMITSRSGDKHRQRAFEIGVQRYLGKPYQELDLMRNVYDLLGIARVRE"
     gene            12193..13533
                     /locus_tag="QEL58_002387"
     CDS             12193..13533
                     /locus_tag="QEL58_002387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein"
                     /protein_id="HDS1676847.1"
                     /translation="MSVSEAHPAPAVALLARPGAARERLREALSHADVQLVLEDDPNG
                     LEPQLLQDARPQIVVIALEAAIEDALERLEPVLSAPGLTLVFDEAELAARRDGWDAQR
                     WGRHLAAKLHGHQQVLPPGAEEEPSLQLEPGHPAPAPAPQEEALQPHLEQALSWADGV
                     PADTLYSPPAHLHEPVALEQALAALQPVLPEPLEASPLPSPPVATPVAAAAPSMSFDH
                     TAWSLVDDMADAPAAAAHGAAVEAPLPSFDTDHLSLVDLDAAAPAGARAGSLLVLAGI
                     GGPDALRRLLGALPPALSVPVLVHMRLDGGRYGNLVKQMARVSPLPVQLAEAGQRAVP
                     GEVHVLADDIGVQAASDGLHFLSDAAGISIAALPAEYTALVLLSGADLAHVGPALDLA
                     AAGAWVAGQVGEGCYDPAAATAVVAAGMVAGEPQELAQAIAARWGEQDDNGEAP"
     gene            13530..13994
                     /locus_tag="QEL58_002388"
     CDS             13530..13994
                     /locus_tag="QEL58_002388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014648089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheW"
                     /protein_id="HDS1676848.1"
                     /translation="MSYASNDEIRGVLIQAGSERVLLPNATVAEMMSRVPVQPVADAP
                     RWLVGEIGWHGWQVPLVSFARLSGLGEEAVGGHNKVVVLKALSGNAQRPYYALLTQNF
                     PQLISVPRDGLLADASEETLPQIVHMRVLLGEQSALLPNLDALEAALDSLAA"
BASE COUNT         2282 a         4732 c         4897 g         2108 t
ORIGIN      
        1 gctgctgttg acgttgacgt tgacgttgac gttgactttg cttcgcagcg ggtcccgggc
       61 cgcaggcccg ggcagcaaaa ccctatcgat cgtcgtgcag ggtgccaccg ggcaggaata
      121 cccacgtgcg ggtgacctgc aggatgtcga tcgcatcgtc tgtcttcggc aacggcggga
      181 acggctgcgc cagcttcacc acccgcagcg ccgcctcatc cagcaagggc gtgccgctcg
      241 aacgcaggat ccggctgctc tccacgctgc catcgcgacg cacgcccacg ctgatcacca
      301 cctggccacc gaggcggcgc tgccgggcct cgtccggata gttcaggttg cccacccgct
      361 cggcacggtc gacccacgca cgcaggtaat tggcataggc atattcccgc gtgctggccg
      421 acacgaactt gcggttcggg cgcttggcgt actgcgccga acgcagatgc acctcggccg
      481 ccagtcgcgc catttccacg tcgcgctgct cacgtgcgct cagcggcgca tccggttcgg
      541 gctgctccgg cgtgggccgc gcctgcgcct gcgccacggt gtcctggcca ttgcggctgc
      601 tgaccacgcg tgcctgcggc ggcggagccg gcgcggccga ttgttgctgc tgcggcaccg
      661 ggctcacccc ggcctgggcc tgcggcacga tgccggcctg gttgtcgcgc gggcgctgtg
      721 cacggtcgtg ctcaccaccg ccttcctggc tggccgcggc aaggaagtcg gcctgcttcg
      781 gggtcagcgc ggtgcgggtc tggctgaaga tcacctccag cgtcggcacc aacggcgcat
      841 cgcccttcac cgcaaagccc acgcccagga tcagcagggc gtgcaccacg accgacagcg
      901 cgatggtcgc tcccagccgc tgcgcttcgc gcggtggcgg gggcagcacg gcaggcgcgg
      961 cagccatcaa cgcaggccgg cctcgagtgc gtcgaacagg gtgccggcga tgttcaggcc
     1021 gtactgtgcg tccagctcgc gcacgcaggt cgggctggtc acgttgacct cggtcaggta
     1081 atcgccgatc acgtccaggc cgacgaagcg catgccgcgg cgcttcattt ccggtccgac
     1141 ctgggcggcg atccaacggt cgcgctcgct cagcgggcgg ccttcgccac ggccgccagc
     1201 ggccaggttg ccgcggaatt cgtcaccctg cggaatgcgc gccaggcagt agtcgaccgg
     1261 ctcgccgtcg accagcagga tgcgcttgtc accggccgtg atgtcgggaa tgaacttctg
     1321 ggccagcgcc agcttgcggc cgccgtcggt cagcgtttcc aggatcacgt tcaggttcgg
     1381 atcgccctgg ccgctgcgga agatcgagcg tccgcccatg ccgtccagcg gcttcagcac
     1441 ggcctggccg tgttccagcg cgaacgcctt caatgccttg gcgtctcggc tgaccagggt
     1501 cggcgggcag cactgcggga acagcagggc ggccagcttc tcgttgtagt cgcgcaggcc
     1561 ctgcgggttg ttgaccacgc aggcgccggc ggcggcggcc acgtccagca cctgggtgtc
     1621 gtagatgtac tcggcgtcga ccggcgggtc cttgcgcatc agcacgatct ggccggagcc
     1681 gaactcggta cggctgaacg tgcccagctc gtaccagccg gacgggtcgt cgcgcacctg
     1741 cagcggcgcg gtctgggcca ccgccacacc cccttccagg gccaggccgc ccgggcgcac
     1801 gtagtgcagg gcatggccgc ggcgctgggc ttccagcagc atggcgaagg tggtgtcctt
     1861 ggcgatcttg atgtgggcga tggggtccat caccacgatg acgttcaacg gcatgggcgc
     1921 acctgtcagg caaggcgttg atggtagcgg caacgccggc cgcgcgcctc cctgctgtac
     1981 tgcaacgcag cgtccgcccg gcggcagcgc aatcattgcg aaccccgtca cgttcagccg
     2041 gccgccaccc cctgcgccgt gggccggcct tgaagcgggc gcggaaagtg cgatatagat
     2101 acgctttcgt agcggccccc gccagagaac gggccgtgcg cttggggata ggcaatgact
     2161 gaaaacacga ctgcgggcgg ggaactcgca ggactccggg tgatggtcat cgatgattcg
     2221 aagaccatcc gcaggactgc ggaaacgctg ctcaagcgcg aaggctgcga ggtggtcacc
     2281 gccaccgacg gcttcgaagc gcttgccaag atcgcagacc agcaaccgca gatcatcttc
     2341 gtcgacatca tgatgccgcg cctggacggg taccagacgt gtgcgctgat caagggcaac
     2401 cagctgttca aggcgacccc ggtgatcatg ctgtcgtcca aggatggcct gttcgacaag
     2461 gcgcggggac gcattgtcgg ctcggagcag tacctgacca agccattcac gcgtgaagaa
     2521 ctgctgggtg ccatccgcac atacgtcaac gcctgaccag gggggaaagg cacaatggct
     2581 cgtatcgttc tgatcgagga ttcaccgacc gaccgcgcgg tgttcaccca gtggctgcgc
     2641 cgtgccggcc atgaggtgct ggaagcggac aacgccgagg atggactgca gctggtccgc
     2701 gaccaggtgc cgcagctggt gctgatggac gtggtcctgc ccggcatgag cggcttccag
     2761 gcgacccggg cgatggcccg tgacgcagcg atcaagcaca tcccggtgat catcgtcagc
     2821 accaaggcga tggaaaccga caaggcatgg ggcctgcgcc agggcgcggc cgattacatc
     2881 gtcaagccgc cgcgcgagga tgaactgatc gcgcggatca acgaactggt ggcctgatgc
     2941 gctcgccctt cgacatcctt gaggcctacg aacggcgcag cctggcccac gcggtgcagc
     3001 tgcccgagcg gcagttcgcc ctggacctgt ggcgtggcgt cggttaccgc gtgggccagc
     3061 gccggctggt atccgatttc cgtgaagtgg tggaaatcgt gccgatgccg ccagtgaccc
     3121 cggtgccgtg tgcacagccg tggctgctgg gcgtgggtaa cctgcgcggc aacctgtttc
     3181 cggtggtcga cctgaagtac ttcctggaag gcacgcgtac cgtgcagcag gaaggccagc
     3241 gcgtgctgat catgcgccag gccggtggcg acgtcgcgct gaccattgat gaactgttcg
     3301 gccagcgcag cttcgaactg gaccagcaga tcgcggccgg cacgctggcc gaagggcgct
     3361 acggccattt cgtcgaccgc gccttccatg ccgacggcca cgactggggc gtgttctcgc
     3421 tctcgctgct gtcgcgcacc cctgaattcc ggcaagccgc ggcctgaggc cgggcatcgc
     3481 cccctgcatt gaagatcgag gttgaacgat gagtactgct tcggacgcca ccaaatccgg
     3541 caagctgcgg ctgggcggca gcaacctctg gctgttcctg ctgctggcat cgatgatcct
     3601 gttcggcgtc aacaccggcg tcgccacctg gcaaggcagc cgcctggcgg acgccggttc
     3661 caaggctgcc gatctgcagg tgctgtcaca gcagctggcc aaccagggcc gtgacgccgt
     3721 cggcggcaac gcgcaggcgt tcaccgcctt caaggcaacc cgcaacgcga tcgagcagaa
     3781 cgtgtcgacc ctgcaggggc gctacggcaa ggagcccggc gtgtccggtg ccattgccac
     3841 gctgggcgag acctgggcgc cgctgggcaa gcaggccggg cagctggttg ccagcgaacc
     3901 ggcggtgctg gccctggccg gcaacgccaa caacttcacc ggcgcggtgc cgggcctgca
     3961 ggcccagctg aacgagctgg tgcgcgcgat gtccgcttcc ggcgctccgt cggcgcaggt
     4021 gtacagcgcg ctgcagcagg tggtggtggc cggctcgatg gcccgccgcg tgaccgaaat
     4081 gcgggccggt ggcagcgccg cggccaacgc cggtgacgcg ctggcccgcg acatcaccgt
     4141 gttctcgcag gtgctcgacg gcctgcgcaa cggcaacgac gaactgggca tcaccgccgt
     4201 acgcggtgcc gccgccatcg ccgcgctgga acaatcgcag cagaagtggg aggcgatgaa
     4261 gcaggacgcc gacgcgatcc tggccagctc gcgccagctg ttcgccgcgc agtcggccgc
     4321 caccgcgctg ggccagggtt cggcgcacat gctggatgac agccgcaagc tgttcgaagc
     4381 gttctcctcg ttcggctcgg tgtccgatac ccgcctgttc ccgaatttct ggatcggcgt
     4441 ggtgtccggc gcgctgtcgc tgatcgcgat catcggcttc gtttccacca acgtgcgcag
     4501 ccgttcgcgc gagcaggaac tgcgctacca gacccaggtg gagttcaaca gccgcaacca
     4561 gcaggcgatc atgcggctgc tggatgaaat ctcctcgctc ggcgagggtg acctgacggt
     4621 gaaggcctcg gtgaccgagg acatgaccgg cgccatcgcc gacgcaatca attacgcggt
     4681 cgacgaactg cgccacctgg tgaccaccat caacgacacc tcggccaagg tcgcgctgtc
     4741 cacccaggaa acccaggcga ccgccatgca gctggcagag gcggcgggcc accaggccaa
     4801 ccagatcacc tcggcctcgg accgcatcgg cgaaatcgca gcgagcatcg agcaggtgtc
     4861 gcgcaactcg gccgaatctg ccgacgtggc acagcgctcg gtggtgatcg ccgccgaggg
     4921 tgccggcgtg gtgcgcgaga ccatccaggg catggaccag atccgcgacc agatccagga
     4981 aacctccaag cgcatcaagc gcctgggcga gtcgtcgcag gaaatcggct cgatcgtgga
     5041 actgatcaac gacatttccg agcagaccaa catcctggcg ttgaacgccg ccgtgcaggc
     5101 cgcctcggcg ggcgaggccg gtcgcggttt cgcggtcgtg gccgacgaag tgcagcgcct
     5161 ggcagaacgt acctcgggtg cgacccgacg catcgagaac ctggtgcagg cgattcaggc
     5221 cgacaccaac gaagcggtca cctcgatgga gcagaccacc gccgaagtgg tgtccggtgc
     5281 gcgcctggcc gaggatgcgg gcacagcgct gaccgagatc gagcgcgtgt ccaatgcact
     5341 gaacaccctc atcaagaaca tctccatcgc cgcccagcag cagtccgcgg cggcctcgga
     5401 catcacccgc accatgggcg tgatccggca gatcaccggc cagacctcgc agggtgccgg
     5461 gcagaccgcc gaatcgatcg gccacctggc gcagctggcg gccgacctgc gtcgttcggt
     5521 cgccgacttc aagctgccgg cgtgacgcgg gcagggcggc gagcaaggaa cccctcgatg
     5581 aagcatttcc atttcccacg ccagaattcg cgcggcctcc gcgcggtggc gaccggagcg
     5641 cgtccatgag cagtctgcgc gatgcgatga gccacgcggc gctgggctgg gtcaagcccg
     5701 agctggacga gaccctgcgc caggtgcgca acgaggtcga gtactacgcg gaagacccca
     5761 gcgatgccag ccgcatgcgc atctgcgccg gcttcctgca ccaggtgcag ggcaccctgc
     5821 gcatggtcga gctgtacgcc ccggcaatgg tggccgaaga gcttgaacag ctggccaatg
     5881 ccattggtgc tggccgcgtc gctgatcgtg acgaggcctg cgcgaccctg atgcgcggca
     5941 gcgtgctgct gcccgattac ctggaacgcc tgcagaacgg ccaccgcgat attccgatcg
     6001 tgctgatgcc gctgctcaac gagatccgcg ccgcgcgtgg cgaggacggc gtgcacgata
     6061 gcgtgctgct ggcgttcgca ccggacagcg tcaccgccac cgaggccgag ctggatcatg
     6121 cccgtggcag cctgagcgga cgcaaccgcg aactgctgga taccgtcggc agcgcggtga
     6181 aggaagaact gctgcgcatc aaggatgcgc tggacctgca cctgcgtacc ggcggtgcac
     6241 cggagcagct gcagacccag gccaacgaac tgggcgcggt ggccgatacc ctgggcatga
     6301 tgggtctggg cgtggcccgt ggcgtggtcg tgcagcagcg cgacgcgctg cgcggcgtgg
     6361 tcgagggccg ccagcagatc gacgagaacc tgctgctgga tattgccggc gcgctgctct
     6421 acgtggatgc ctcgctggac gaccaggtgg cccatctggg cgccgggggc agtggcgagg
     6481 acgacccgag cgcggtcgag aaccggcgca cggtcgaagt gctggcgcat gaagcgatcg
     6541 ccaacttcgc ggcggcgcgc gaacacttcg tcgccttcat cgaaaccagc tggaaccatg
     6601 ccgagctgca ggacgtgccg cgcctgctgg gcgatgtggc cggcgcactg cgcatgctcg
     6661 acctgggcac ggcggccgac tacctgcgcg gtgtgcagca gtacatcgag gccgagttga
     6721 ttggccgcca gcgcgtgccc agcggtcgtc agctggacac tctggccgac gccatggcca
     6781 gcctggagta ctacctggaa gccctgcgcg accgtcgtcc gggtcgtgag gacatcctcg
     6841 acatcacccg cagcagcctc gaggcgctgc gttactggcc gctgccggac cgcaacgcgg
     6901 tcgagccggc atcgttcgcg gcacagccgg tcgaacgtga gccggttgcg ctgcaggccg
     6961 aggccctgca gccggagcgc atcgagattc cggtgcagcc ggccgcgcct gcggcaggca
     7021 ccgtgccggt gccgctgccg gacttcacgt tcgatccgcc accggtcgca cccgcgccag
     7081 aggttgtcga caaccgcctg atgttcggtg cgctgggctc cgccgcgatc gacgccgcta
     7141 ccgcgccgct gtcgctgcag gacgacgcgg aggcaccgct ggtctttgcc gcttccagtg
     7201 cgcccgcacc cgacgtcccg caatgggatc ttgcgccgtt ccatccggat gccgatccac
     7261 tcgacgccgc tggcgatgag cgcagcccga cctttgccag cttcgatccg gtcagcttcg
     7321 aacagggcga tgcagggcag ggcgctgcgg cacagtggac gctttcggag gccgtgccgt
     7381 cggcacaggc ggatgcggtc gctgtcgatg ccgacgagga cgcaggcgcg acggcaggaa
     7441 tcgaccccga tgcgcacgcc gcgccggtgt tcgacccggt ggccgccgag cacgacgctg
     7501 tggcggcgca cgacgacgtg gtgttccgct tcgacgccga tgcgttggac aacgccgatg
     7561 atgtgctgtc gctgcatgcg atggagacgc tgtcgctgga cgaggatgcc gggttgcacc
     7621 cgtcgctgga gatcgtcgac gccggcccgg cagcgctgtc ggacgaggct ccggcggttg
     7681 ccggactgga cgccgcgcct gcggatgcac ccgcggtctc ggtgatcgac atcgacacca
     7741 tcgcaccgat cgatttcagc gaagccgacg cgcagttctt cgccgagctg agtgcggccg
     7801 ccgcggactt caatccgcag gccgtggctg caccgaccgt tgccgaagcg tccgttacga
     7861 cggatgccga ggccggcttc gaagcaggct tcgacgatga cgccgagaac atcgacgagg
     7921 acatccgcga ggtgttcctg gaagagttcg acgacgaact gaccaatctc ggcaccttgc
     7981 tgccagcatg gcgcatgcag ccggacaaca tggaccggct gcggccgatc cgacgcatct
     8041 tccacaccct caagggcagt ggccgcctgg tcggtgcacg caccttgggc gagttcgcgt
     8101 ggaagatcga gggcatgctc aaccgcgtgc tcgatggcag ccgcccggcc tcgccggcgg
     8161 tgctggccat ggtggacaac gcgcatgccg cgctgccgca gctgaacgcc gcgctgcgcc
     8221 acggccagcg catcagcgtg gacctgcagg ccatgcaggc catcgccgat cgtgtcggcg
     8281 ccggtgaaga gacctactac gtgccgctgc cggttgcagc cgcaccggtg gcacccgtgc
     8341 tcgagaccga ggcggaaggc gaggacgaga tcagccgcat tctcgaagcc gaagcgattg
     8401 catcggtaca cgccgacgct gaggtggcac ccgaggccgt gggcacgccc gccaacatcg
     8461 acagcgtgct gcgtgagatc ctcgaagccg aagtggaagt gcaccaggcg accctgcagg
     8521 actggctgcg ctcggcgcag caggcaccgc agccggtcag cgacgcgctg ctgcgcgcgg
     8581 tgcacaccat gaatggcgcc ttcgcgatga ccgaagtgcc ggaaatcacc gccgtgaccg
     8641 gcggcgccga gtcctacatc aagcgtgcac tggccgccga tgtggtgccg ggtgacgaag
     8701 gcgtggccgc gctggacgcg accgcgcagg cgatcaccgc gaccatggaa gccttgcagg
     8761 ccgagcagcc gcggattgca ccgcaggaag cactggtgca gcgcctgcag gcgctggccg
     8821 gcgaactgcc ggaagcgcgc tggccgatgg tcgggctgga agacgaagac gacgatctgg
     8881 cgctggaggc cgaagcagcg tctgaggccg cagccgatac gcaggctgcc gaggtagcgg
     8941 atgctgccgc agccgaggct gacgagccgg agctggaacc gcgtgctgcc gaagtgcagg
     9001 cagcggagag cacggacgcg atcggcgcgg gcctggagac cgccgagctg accggcagcg
     9061 atgatctgtc gcgctacttc gatgccggat ggccggcggt gccggctgag ggcgacgcag
     9121 ccagtgtgga tatcgggtcg attgaatcga tccagccggt cgagcatgcg ccgcttgcag
     9181 cagtggccga agcggacgcc gcaccgacgc cggacgccga agccgacctg accgctgcag
     9241 acgatctgtc gccgtacctc gacgccagcg cgctgccggt ggatgaccgc gacgccgatg
     9301 aactgcctgt ggtcgcagaa gctgtcgcaa tcgacctgaa tacgcagtcg tccgccgacg
     9361 gactggacag cgaagaccgc ttcatcgacg aagctgctgc attgccactc gacagcgggc
     9421 tgtcgagcct gcaggatgaa atggctgcgc cgggttttgc agaaccggtc acactggcag
     9481 ccgcgctcga ggccggcctg cacgtgatcg acgaagagca gaccctggac gacgacgggc
     9541 agtggcccgt gctcggcctc caggccagcg aactcgcgcc aggcgaggcg gatgcctttg
     9601 ccgaggatgc ggacgtcggc ggggaggcgg cggtcggtga aggagagagc gccgaccagc
     9661 cgtccccggc gacggtggat gggcaccccg cggtggatgt cgccgcgccg gtgcgcttct
     9721 tcgaactcga agaagcaccg ggccaggcca ccgtgcctgc cgacgtcgag ccggtcgaga
     9781 tcgacctcgt gcccagcgca ccggtccatg ttgaagcggt tgcaggggaa gaaggcacgg
     9841 acagcgccga ggcactcgac ttcagcgtgt atgaccgcga gctggtcgac atcttcgtcg
     9901 aggaaggcaa ggacctgctg gatcattgcg atggcctgat cagcgaactg cgcgatgcgc
     9961 cgcaggaccg cgaggtgctg gctggcctgc agcgcgacct gcataccctg aagggtggcg
    10021 cacgcatggc cggcatcaat gccatcggcg accttggcca cagcatcgaa tcgttgctgg
    10081 aagcggtggc cgccggccgc accgagatcg agcgtcgtga cgtgcagctg ctggaacgtg
    10141 gcttcgatcg cctgcaccag ctgcttaccc gtaccggtgc ccatcgcgtg gtcgagccgg
    10201 cgcaggacct ggtcgacgcc ttcgacgtcc gcaccaccac cgatatcgcc gccgccgcgg
    10261 ccgtccacgc ggtcagcgtg gaccagagcg taccggcgcc ggccgacagc ccgtcaaccg
    10321 ccgtggtcga cgctccgctg tcggcaccgc tgccgatcga aggcatggtc gaagaagacc
    10381 cgctggcgcg accgcagcag gaacaggtgc gtgtgcgtgc cgatctgctc gaccgcctgg
    10441 tcaaccacgc cggtgaagtg gcgatctacc gttcgcggct tgaacagcag ctcggtgcct
    10501 tccgcggcgc catgggcgaa ctggagcgca ccaatgcgcg actgcgcgac cagctgcgcc
    10561 gcctcgatct ggaaaccgag gcgcagatcg ttgcccgcta ccagcgcgag caggaccagg
    10621 ccgaccagaa gttcgatccg ctggagctgg accgcttctc cacgctgcag cagctgagcc
    10681 gcgcactgaa cgaatcggcg gccgaccttg gcggcctgca gggcgtgctc gacgacctgt
    10741 cgcgccagta cgactcgctg ctgcagcagc agtcgcgcgt cagttcggaa ctgcaggatg
    10801 gcctgatgcg cgcgcgcatg gtgccgttcg atggcctggt gccgcgcctg cgccgggtgg
    10861 tccgccagtc gggcctggac accggcaagc aggttcacct gaccctggaa ggcacccacg
    10921 gcgaactgga ccgcaacgtc ctcgaccgca tggtcgcgcc gctggagcac atgctgcgca
    10981 actccgtggc ccatggcctg gaagcaccgg aacagcgccg cgccgccggc aagccggagg
    11041 aaggcgagat tgccatccgc ctgcaccgcg aaggttcgga aatcgtgctg gaagtggccg
    11101 atgacggcgc cggcctggac cgcgaagcga tccgccgccg cgccatcgac cgtggcctgc
    11161 tggccgccga tgcgcagccg aacgagcagg aactggacaa cctgatcttc gcttccggct
    11221 tcaccaccgc cgaccaggtc agccagctgg cgggccgtgg cgtgggcatg gacgtggtgc
    11281 gcaacgaggt gcgccagctc ggtggctcgg tcgacatcca gtcggtacgc ggccagggcg
    11341 tgcgcttcac cctgcgcctg ccgcagacgc tggccgtcac ccaggccgtg ttcgtgcaga
    11401 tcggcgaaac caccttcgcg gtgccggtcg cctcggtcag tggtatcggc cgcctgtcgc
    11461 gcgagcgctt tgaagcggcc gacagcagct accgctacag cggcgaagac tacccgctgt
    11521 acgaccttgg caccctggtc ggccaggccc cggcgcgtgc cgacggccag gaccaggtgc
    11581 cgctgctgct ggtccgcgcc ggcgacctgc gtgccgccgt ggcgatcgac caggtgctgg
    11641 gcaaccgtga aatcgtggtc aagccggtcg gcctgcagat tgcttcggtg ccaggtatct
    11701 acggcgccac catcaccggc gatggccgcg tggtggtgat cctcgacgtt gcaccgctgg
    11761 tgcgtcgttt cctggccaac ccgacgctgc cggtactggc caacgcaccg cgccaggagc
    11821 gccaggtgcc gctggtgatg gtggtcgacg actcgctgac catgcgcaag gtcaccggcc
    11881 gcatcctcga acgccacaac ttcgaggtca gcgttgcccg cgacggcgtg gaagcgctgg
    11941 agcgcctgga agagcgcgtg cccgacctga tgctgctgga catcgaaatg ccgcgcatgg
    12001 atggctacga actcgccacc gccatgcgag ccgacccgcg ctacagggag gtgccgatcg
    12061 tgatgatcac ctcgcgcagc ggcgacaagc accgccagcg cgccttcgag atcggtgtcc
    12121 agcgctacct gggcaagcct taccaggaac tggacctgat gcgtaacgtg tacgacttgc
    12181 tggggatcgc ccgtgtccgt gagtgaagcc catccggccc cggccgtcgc cctgctggcc
    12241 cgcccgggtg cggcgcgtga gcgcctgcgc gaggcactgt cgcacgccga tgtgcagctg
    12301 gtactggaag acgacccgaa cggcctggag ccgcagctgc tgcaggatgc ccgtccgcag
    12361 atcgtggtga tcgccctgga ggcggccatc gaggatgcgc tggaacgcct tgagcccgtg
    12421 ctgtccgcgc cgggcctgac cctggtgttc gacgaggccg aactggcggc gcgccgggat
    12481 ggctgggacg cgcagcgctg gggccggcat ctggcggcca agctgcatgg tcaccagcag
    12541 gtgctgccgc ccggcgccga ggaagaaccc agcctgcagc tggagccggg ccatccggca
    12601 ccggcaccgg cgccgcagga agaagccctg caaccgcatc tggagcaggc gctgagctgg
    12661 gccgacggtg tgccggctga caccctgtac tcgccaccgg cgcacctgca tgagccggtc
    12721 gccctggagc aggcgctggc ggcgttgcag ccggtactgc ccgagccgct ggaggcatcg
    12781 ccgctgccgt cgcctccggt ggccacaccg gtggccgcgg ccgcaccgtc gatgtcgttc
    12841 gaccacacgg catggtcgct ggtcgatgac atggcggatg caccggccgc tgctgcccac
    12901 ggcgctgcgg tggaagcgcc gttgccttcg ttcgataccg atcacctgag cctggtcgac
    12961 ctggatgctg cggcaccggc cggcgcgcgc gccggttcgc tgctggtgct ggcgggtatc
    13021 ggcggaccgg atgccctgcg ccgcctgctc ggagcgctgc cgcctgcgct gagcgtgccg
    13081 gtgctggtgc acatgcgcct ggatggcggt cgttacggca acctggtcaa gcagatggcg
    13141 cgcgtgtcgc cgttgccggt gcagctggcc gaagccggcc agcgcgccgt acccggtgaa
    13201 gtgcacgtgc tggccgacga catcggtgtg caggcggcca gcgacggcct gcatttcctc
    13261 agcgatgccg ccggtatctc gattgcagcg ttgccggccg agtacaccgc gctggtgctg
    13321 ctcagcggcg ccgacctggc ccacgtcggg ccggcgctgg acctcgccgc tgccggggcc
    13381 tgggtggccg ggcaggtggg cgagggctgc tatgacccgg cggcggccac cgctgtcgtt
    13441 gccgccggca tggttgccgg tgaaccgcag gaactggcgc aggccatcgc cgcgcgctgg
    13501 ggtgagcagg atgacaacgg agaggcacca tgagctacgc cagcaatgat gaaatccgcg
    13561 gcgtcctgat ccaggccggc agcgaacgcg tgctgctgcc caacgccacg gtggcggaaa
    13621 tgatgtcgcg cgtgccggtg cagccggtcg ccgacgcgcc gcgctggctg gtcggggaaa
    13681 tcggctggca tggttggcag gtgccactgg tatcgttcgc gcggctttcc gggctgggcg
    13741 aggaagccgt gggcggccac aacaaggtgg tggtgctgaa ggcgctgtcc ggcaacgcgc
    13801 agcgtcccta ttacgcgctg ctgacgcaga acttcccgca gctgatctcg gtgccgcgtg
    13861 acggcctgct ggctgacgcc tccgaggaaa ccctgccgca gatcgtgcac atgcgcgtgc
    13921 tgctggggga gcagagcgcg ctgctgccga acctggacgc gctggaagcc gcgttggatt
    13981 cgctggctgc ctgatcggac atccgccggg cactttgaa
//
LOCUS       DAOKIP010000098        13999 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.098,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000098 DAOKIP010000000
VERSION     DAOKIP010000098.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 13999)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13999)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13999
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.098"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            61..408
                     /locus_tag="QEL58_002389"
     CDS             61..408
                     /locus_tag="QEL58_002389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014647257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676849.1"
                     /translation="MDPSNVNAQVIDVINQVQTATMATTVVKTSGAGKAYQSVAQSAA
                     IAVQDAADALRNVSTIATTAAGVAMAQYLATGDEKYARVLTQAQTMMQGATDDFTRVG
                     SAAATVLKDFPAQ"
     gene            429..1508
                     /locus_tag="QEL58_002390"
     CDS             429..1508
                     /locus_tag="QEL58_002390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008268661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676850.1"
                     /translation="MSVFIDGRPVPHPGQFSSRTKRVLPFVDGGHYWLQWAIDSHEHR
                     YAFADEGAMLEGVQQGLHGSRMAWLPHAGLQVSPVKLLSLHTDELEALRQLESSPPSN
                     LLSNEVQSVLVRHGLLSNKELGAYRPFLAAVGAGDAPLLQQLDFRESLALYQLAQEQG
                     GHNPPSEAQAEAARFALQHARRPIEFADYFRFYLRAYRPGGSSDLRLERATHALQTLL
                     PMLFGYLDGPQLSHLPSPEQVRAAIAETLAANRHIGYARISLAAQQVAMFLGDGGGLQ
                     LDGERWREAARRQLRSAQAFLDNHPVSRGQLGQDGASVLFAIDGSKEQARIQVEDNVI
                     TLQDYRRTRRFAEDEAEIGYQADAV"
     gene            1721..1957
                     /locus_tag="QEL58_002391"
     CDS             1721..1957
                     /locus_tag="QEL58_002391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012511154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676851.1"
                     /translation="MTFPIPPSPFPTPDRPGGKTPMQIAQELADAAMAASEEGIRQAM
                     TVSQQAVEAAAEAARRADEAAEEAVRRAAEANAR"
     gene            complement(2013..3488)
                     /locus_tag="QEL58_002392"
     CDS             complement(2013..3488)
                     /locus_tag="QEL58_002392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012511155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDS1676852.1"
                     /translation="MHRQVSQMLQRAYRPYRSLPDLLGAFIKEFSQHHALRGGRVHLR
                     GPDTAPGQDASLEAGQRLPIRYGGEVLGELQLEGEAGGLDSSALALGEAFAHRCAHLI
                     KRYEAQAWAEQALSRPLLLVGACDALKRMEEFVERAAASQLPVLLRGEFGTEKMELAA
                     ALHSCGPRRRGPFVEVNCAHPQETPADWFARARGGSLYFHEVDELPVPLQAQLSHCIR
                     DLETATVQSGQARAIRVIASTSADLEQRVRERQFSRALLAGLEFLTVDIPPLRERSDD
                     IDALVARSLQMHGFNPQVISEDVLDALRGHDWPGNLLEMERVVVRLAVMTGGRSIRRE
                     DLLRHAPGLMLGETVVDADPPVPDGEALQAAGAVPQAVASTTPAPSHDGLHDGLKRAL
                     AYLKDHAAEPVTLGDLARQAHVSQSHLGFLFRSELGTTFKLLLQQQRIEHAKQLLRGG
                     QRLRITDVALQVGFGDLSHFEKSFRRLVGVSPRSYRRIPEQ"
     gene            3777..4220
                     /locus_tag="QEL58_002393"
     CDS             3777..4220
                     /locus_tag="QEL58_002393"
                     /inference="COORDINATES: protein motif:HMM:NF016394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CD225/dispanin family protein"
                     /protein_id="HDS1676853.1"
                     /translation="MNIQIAAPHPRVGGPLHHQEIVLFAGCGAAPAISGQRAAPGPYA
                     GAASGRHNPPPTKEIQRMEHTSPAAPKNYLMWAILSIFGGFWPFGIVATVYANRTSSL
                     LAAGQIGPATVASRKALRWMIASFVTLPLCVLLLVGYALILRAAG"
     gene            4278..5162
                     /locus_tag="QEL58_002394"
     CDS             4278..5162
                     /locus_tag="QEL58_002394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HDS1676854.1"
                     /translation="MPLGFIGLGVMGTPMAGHLARAGHAVLGWSRSGRNHAAARAAGV
                     EVREQLHDVFAACETLILMLANDEAIDSVLDRQGSAFGERVRGRLLINMGTSSAAYSQ
                     ALGEQIRAAGGRYVEAPVSGSRVQAEAAQLVIMLAGTDADLAVAAPLLAPMGGQTVCC
                     GSVPSALRMKLAVNLYLITLVTGLAEAVHFAEAHGIELERFAQVLNAGPMASEVSRIK
                     LDKMARGDFAVQASITDVHKNSALVAAAAREAGMHAPLIEASDALFAQAEHAGLGALD
                     MAAVLEVVRAGPGGTDRA"
     gene            5264..6403
                     /locus_tag="QEL58_002395"
     CDS             5264..6403
                     /locus_tag="QEL58_002395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012511156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPFH domain-containing protein"
                     /protein_id="HDS1676855.1"
                     /translation="MGLVQAVKGAVGGVLADQWKDFYTVPTGLPSTAALFAAVPHGTN
                     AGRGSNTSGSSNIISNGSKIIVPEGYGLLLFQDGAITAFVAEAGGYEWRSDDLNSQSI
                     FAGDGLVSTFIKQSWERFKFGGQPGSQQAAYFVSLKELPDNRFGTQSEIYWDDGFLNT
                     QVGAVTRGSYTLKIVDPILFVKNFVPASYLQPGQVFDFTDLDNAAASQLFNEVVGSLA
                     PAFSLYTNDPGKGNRITKLQQDSIGFAQSLSAAVEQAYQWQSDRGLAIVKTAIVSIEY
                     DANTRELLKTVQRADALSGSRGNSNLQASVAQGIQSAGENGGAAGLVGVGMASGMFGV
                     GGMQQPVTPAAEDPVAKLKKAKEMLDLGLITQSDYDALKAKALGL"
     gene            6424..7776
                     /locus_tag="QEL58_002396"
     CDS             6424..7776
                     /locus_tag="QEL58_002396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TFIIB-type zinc ribbon-containing protein"
                     /protein_id="HDS1676856.1"
                     /translation="MSDPRNGPPPLPGSAPATPPPLPAASLNGPGSPQDVPPLPGSFP
                     LDTSTLPQAIRDEVEAPDPVAIDTSASELKDGLNRCPKCGATDIRPKAGTDILVCLYC
                     RHEWHGARVEEEFGLGEAIDQLRGTVIASGARDIDADTSALMTFKCTGCGAEVTVNTE
                     STMTARCHWCRHVFGVNEQISNGAVPDAVLPFHIKKDDAVARIRQFVDKRRMFALKAF
                     KQEFTPENVVGVFLPYMIVDGNASAAVAGKGEIQTRQYTVGSEKNKRTVYDADIYQIE
                     RQVDFTVDDLPLESSAERGNLDVRANTNNIINTILPFDTKNAVKWNASYLAGFTSEKR
                     NLDVEKLRPRLEDQLLSIARSQVESSVRGYNRGVRWEQEQLEVHGTRWVSMYLPVWLY
                     SYHQPGKNGGMLHYIAVNGRTGETMGSVPVQQWKMLLAALTAGTVIEALAILILMATS
                     "
     gene            7773..8030
                     /locus_tag="QEL58_002397"
     CDS             7773..8030
                     /locus_tag="QEL58_002397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676857.1"
                     /translation="MSDDSGLWLLAAGPAGATALYWALYRYYRNTDKSHSFEHETEVK
                     AQPVTGSNQKVGQVRGTEATRIEGDNVYQYRIRVARVKPDR"
     gene            8308..9972
                     /locus_tag="QEL58_002398"
     CDS             8308..9972
                     /locus_tag="QEL58_002398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosinase family protein"
                     /protein_id="HDS1676858.1"
                     /translation="MRYTRRDFLATTASASLASLVAPAAWASGTTPAEKAVQARYHRY
                     NVTSPEGQRMLASYARGINAMLKLPPDDPRNWFRNAFVHLMDCPHGNWWFYVWHRGYV
                     GYFEQTIRTLSGDPQFAMPYWDWTELPRIPPAMFDGVLTPTDSAYAPYTRNLAVFTRF
                     MRPALQRYWDKLDAGQRGQLKLRGYLTADDVWNDVTGYSATEKTGISGNAAYAITCGA
                     RYLWRENPGFDAKTASAVSPDTIHAGLSPVDFYNADVSRSFTSSRTASHVVPPDGATK
                     FSVLEGFPHNKVHNCIGGVGAVDPGPYGNMTNFLSPLDPIFYLHHANMDRLWDVWNQL
                     QQSRGKPIMPVDVDQRRQFMNEPFRFFVNAQGGFVGERPASAFFSTTAFDYDYVYPGR
                     NDLLQAAALPAAPGAVRLVRGTRSDGAVRVAVPNEAVRAHLATSAPRQLIAEVTLERP
                     QGLNNTREFDVLVNAPAGTSAVAADSPYYAGTVSFFGPSMPGMDHSHPTTFAVPLPQK
                     LGALQAVKAADDGTTTLEIRLVASTGQAPQTFPVLDASILVAPLQP"
     gene            complement(10026..10922)
                     /locus_tag="QEL58_002399"
     CDS             complement(10026..10922)
                     /locus_tag="QEL58_002399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006368916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-protein phosphatase"
                     /protein_id="HDS1676859.1"
                     /translation="MKHRSTELALAVMLSLPLAASAVAADAPQAVAAKPAAAANVKPV
                     AADAQRVLPLQGAWNVRTFAGLQGRHGPIPATAFVRTADLGRLTDADRDALAAAGVKL
                     DIDLRTADEEAQSPDLLAKDDRFDYQRISLMGTEKMDLQKMMTSFPDSLGEAYVQWLG
                     HSQSQFKQVFQRIAAQQDGAVLFHCTAGKDRTGIIAGLLLDLAGVPKAEIVHNYAISA
                     HYLEGQPKDSAMNAQIMALIKQNPEIGRKMAGMSGTAPDNMEQFLAALHSQYGSAEGY
                     LKSIGVSEQEIQQLKVRLGQAG"
     gene            complement(10940..13234)
                     /locus_tag="QEL58_002400"
     CDS             complement(10940..13234)
                     /locus_tag="QEL58_002400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010485520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDS1676860.1"
                     /translation="MRYATLHRPLLTLAIAAALPAMAHAEDGPHAEADATASADAART
                     VVALDQVVVTAQKRATNLQETPISVSVVDAEALKDRSAISLGSLSDGSIPSLRVTPFA
                     TRSSALNIGIRGIGASGDANQPARDAGVGIYVDGVFMGRAQGLGSMLYDVERIEVLKG
                     PQGTLFGRNTEGGAVSIVTKAPTGEFGGRVSAGVSNYSGYNSALHLDLPKLGDVSFKI
                     DAVQAKRGGTTDNPMRGERDFNSYDKRGARLSALWQPSDGFSLLYAFDRSYDATTPYH
                     TQVLVPGAYLSPLQKAGASLDRRDSAILGGPQEDNIGRTSGHLLNLSWTLNENLELKS
                     ISSYRELTQGQFDMGLVDAISAYGGAGTPFGRYSLAQVYQHQYSQEFQLIGNTAQVQF
                     LGGAFYYHETAGDNAQTPNMLVWGPGGNSYTLNPATNPLDLSRVRIDRASKAWTDSLG
                     VFGQATWTPEAMPGLHLTAGGRYTRDDKKGSLYIVNGAATSLAFKDRWSRFDPMVNIA
                     YDLGEHAMVYARYSTGFKAGGANSRSTNYTAFGPEEVTAYELGFKSQFWDNRARLNLA
                     VFDSTIAHKQMDFSLPFDPNSGETRTTMVTTNALSDGKSRGAELEFSVMPVDNLTLGL
                     NYAYTKIDAQTATDPFGAGVQVTVQPLLAPKNAGSLSADYLVPFANFSALKFHVDGNW
                     SDGYYTSEYDQMLTDSSFVVNARVALVDVPVNSTGTTMSFSLWARNLLDEQHLFYKLN
                     SPALGQTGIFNDPRTFGLDVAVNF"
     gene            13358..>13999
                     /locus_tag="QEL58_002401"
     CDS             13358..>13999
                     /locus_tag="QEL58_002401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012511160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HDS1676861.1"
                     /translation="MTPKPAVAPLVDDAAAAHAEAQRRRILDAAQKCFITRGFHAGSI
                     GDIAAEAEISQGLMYRYFANKRTLILALIERQLRHDQASISEMPAASDLVDGLLECYR
                     QWARGAVLPIHGNAIASVALYAEINAEAHRDPMLAQVLRTHDKQTSAAIHAWLRQHDA
                     RLGRPIDEEAIAGRTLLLRLLVEGLAMRAVRDPDLPPARVRALLADAIGRVMAD"
BASE COUNT         2382 a         4796 c         4509 g         2312 t
ORIGIN      
        1 accacgtcgt gaccgtgccg cggctgcatt ccggccgccc ccgcccatca aggagcccgt
       61 atggacccga gcaacgtcaa cgcccaggtc atcgatgtga tcaaccaggt gcagacggcc
      121 accatggcca cgaccgtggt gaagaccagt ggcgccggca aggcctacca gtcggtggcc
      181 cagtccgcgg cgattgccgt gcaggacgcc gccgacgcgc tgcgcaacgt ttccaccatc
      241 gcaaccaccg ccgccggcgt ggccatggcc cagtacctgg cgaccggaga cgaaaagtat
      301 gcgagggtgc tcacgcaggc gcagaccatg atgcaggggg ccaccgacga cttcacccgc
      361 gtcggcagcg ccgctgcgac cgtcctcaag gattttccgg cccagtgagg ccgccaggag
      421 agccacgcat gagcgttttc atcgacggtc gccccgttcc ccatcccggc cagttcagtt
      481 cgcgaaccaa gcgcgtgctg ccgttcgtcg atggcggcca ctattggctg cagtgggcca
      541 tcgattcaca cgagcatcga tacgcctttg cagacgaagg cgcgatgctc gaaggcgtgc
      601 agcagggcct gcatggttcg cgcatggcct ggctgcccca tgccggcctg caggtgagcc
      661 cggtcaagct gctcagcctt cacaccgacg aacttgaagc cttgcgccag ctggaatcga
      721 gcccgcccag caacctgctg tcgaatgaag tgcagagtgt gctggtccgg cacggcctgc
      781 tgagcaacaa ggaactgggc gcataccggc ccttcctcgc agccgttggc gccggcgacg
      841 cgccgctgct gcagcagctc gacttccgtg aatcgctggc gctgtaccaa ctggcccagg
      901 aacagggcgg ccataacccg cccagcgagg cccaggccga agcggcccgt ttcgccttgc
      961 agcacgcacg caggccgatc gaatttgccg actatttccg cttctacctg cgtgcttatc
     1021 ggccgggagg cagcagcgac ctgcgcctgg aacgcgccac gcacgcattg cagaccctgc
     1081 tgccgatgct gttcggctac ctggacgggc ctcagctttc gcatcttcca tcccccgagc
     1141 aggtgcgcgc cgccattgcc gaaacactgg cggcaaaccg ccacatcggc tacgcccgca
     1201 tttcgctggc cgcgcagcag gtcgcgatgt tcctgggcga tggcggtggg ttgcagctgg
     1261 atggtgaacg atggcgcgag gccgcgcgcc ggcaactgcg cagcgcacag gcgttcctcg
     1321 acaaccatcc ggtctcgcgc ggccagctcg gccaggacgg tgccagcgtg ctgttcgcca
     1381 tcgatggctc caaggaacag gcgcgcatcc aggtggagga caacgtcatc accctgcagg
     1441 actaccgccg aacgcgccgt ttcgccgagg atgaggccga gatcggctac caggcagacg
     1501 cggtgtgagc ccgccctcac ccgcgcccgg gcctgatgac ggcgtgcagg cagccacggc
     1561 cgcgctggcc tcggccgccg gcgtggccgt gaacgccggc cgtcaggccg cgcggcagca
     1621 agcgcagaag atcctggccg atgcccaggc ggcattgcgc cacatcctgg gggagcgcaa
     1681 cgacggctcc tcctccccag ccccagaagg agttcctgcg atgaccttcc cgatcccacc
     1741 ctctccgttc cccacgccgg accgtcccgg cggcaaaacc cccatgcaga ttgcgcagga
     1801 acttgccgac gccgcgatgg cggcaagcga ggaaggcatc cgccaggcga tgacggtctc
     1861 gcagcaggcc gtcgaagccg ccgccgaagc cgcccgccgc gccgatgagg ctgccgagga
     1921 agcggtacgc agggccgccg aagcgaacgc caggtagcgt ccgctgcggt gatgcgctca
     1981 ccccgggcag gcctgaacct gcgccggggt tttcattgct ccggtatgcg ccgatagctg
     2041 cgcgggctga ccccgaccag gcgccggaag ctcttctcga agtggctgag gtcaccgaag
     2101 ccgacctgca gcgcgacatc ggtgatgcgc aggcgctgcc caccccgcag cagctgcttg
     2161 gcgtgttcga tgcgctgctg ctgcagcagc agcttgaagg tggtgcccag ttcactgcgg
     2221 aacaggaagc ccaggtgcga ctggctcaca tgcgcctggc gcgccagatc gcccagcgtg
     2281 accggctcgg cggcgtgatc cttcaggtag gcaagcgcac gcttgaggcc atcgtgcagg
     2341 ccgtcgtgcg acggcgcagg tgtcgtcgaa gcgacagctt gcggtactgc cccggccgcc
     2401 tgcagcgcct ccccgtcggg caccggagga tcggcatcca ccactgtttc gcccagcatc
     2461 aggccaggcg catgccgcag caggtcctca cgacggatgc tgcgcccgcc ggtcatcacc
     2521 gccaggcgca ccaccacccg ctccatctcc agcaggttgc cgggccagtc atggccacgc
     2581 agcgcatcca gcacgtcctc gctgatgacc tgcgggttga acccatgcat ctgcagcgag
     2641 cgcgccacca gcgcatcgat gtcgtcgctg cgctcgcgca acgggggaat gtccacggta
     2701 aggaactcca gcccggccag cagcgcccgc gagaactgcc gctcgcgtac acgctgttca
     2761 aggtcggcac tggtggaggc gatcacccgg attgcgcggg cctggccaga ctggacggtg
     2821 gcggtctcca ggtcgcggat gcaatgcgaa agctgcgcct gcaagggaac cggaagctca
     2881 tccacttcgt ggaaatacag gctgccgccg cgggcgcgtg cgaaccagtc cgcaggcgtt
     2941 tcctgtgggt gggcgcagtt gacctcgacg aacggccccc gccgccgcgg accgcagctg
     3001 tgcagggccg cggccagttc catcttctcg gtgccgaatt cgccgcgcag cagcaccggc
     3061 aactggctgg cggcagcgcg ctcgacgaac tcctccatcc gcttcaacgc atcgcaggcg
     3121 ccgaccagca gcaacgggcg gctcagggcc tgttcggccc aggcttgcgc ttcgtagcgc
     3181 ttgatcagat gtgcgcatcg atgcgcgaac gcttcaccca gcgccagcgc actgctgtcc
     3241 agtccacccg cctcgccttc cagctgcagc tcgccgagca cctcgccgcc gtagcggatc
     3301 ggcaggcgct ggccggcctc cagcgacgcg tcctggccag gggccgtgtc cggtccacgc
     3361 agatggacac ggccgccacg cagcgcatgg tgttgcgaaa actccttgat gaacgcgccc
     3421 agcaggtcgg gcaaggaccg gtacggtcga taggcgcgct gcaacatctg actgacttgc
     3481 ctgtgcattg aaactcccct tgcgaatggc gccccggtgc tgctgcacca ggcgatcgcg
     3541 caatgcctag cgtctggctt cattgcgtga tgctgcgatg cctacgccgc gcctcgcgcc
     3601 agccgctgca cacgcagatc aacgcgcacg ctgtccgccc ccatgccccc agggggttgc
     3661 cgtcggtggg tcgacgatgc ggacgtcgga cggatccgga ttcccccaac gccttcacgg
     3721 cgccggcatt tccgattatc gaatcggagt ttcaagagaa acgtgatgat aatcacgtga
     3781 atatccagat tgccgcacca catccacggg tcggcgggcc tctgcaccac caggaaatcg
     3841 tccttttcgc gggctgtggc gcggcgccag cgatatctgg gcagcgtgca gcaccgggcc
     3901 cgtatgccgg tgccgccagc gggcggcata atccgccccc aaccaaggag attcaacgta
     3961 tggaacacac tagcccggca gcccccaaaa actatctgat gtgggcgatc ctgagtatct
     4021 tcggtggctt ctggcccttc ggcatcgtcg ccaccgtcta tgccaaccgc acgtcatcgc
     4081 tgctcgccgc cggccagatc ggcccggcca cggtggcatc gcgcaaagcg ctgcgctgga
     4141 tgatcgcttc attcgtcacg ctgccgctgt gtgtcctgct gctggtgggg tatgcactga
     4201 tcctgcgcgc agcgggctga gccacacagc gccggtctgc ggcatgatgg gcgtcctgtc
     4261 ctgctctgga gccagccatg cctttgggat tcatcggcct gggcgtcatg ggaacgccca
     4321 tggccggcca cctggcgcgg gcgggccatg ccgtgctggg ctggtcccgc tccggccgca
     4381 accacgccgc cgcgcgtgcc gcaggcgtcg aggtccgtga gcagctgcac gacgtattcg
     4441 cagcctgcga aaccctcatc ctgatgctgg ccaacgacga agccatcgac agcgtgctcg
     4501 atcgacaggg cagcgcgttc ggcgaacgcg tgcggggccg cctgctgatc aacatgggca
     4561 ccagttcggc ggcgtattca caggcgctgg gcgagcagat ccgcgccgcg ggtggccgtt
     4621 acgtggaggc gccggtctcc ggctcccgtg tgcaggccga agcggcgcaa ctggtcatca
     4681 tgctggccgg caccgatgcc gatctcgccg tagcggcacc gctgctggca ccgatgggcg
     4741 ggcagacggt gtgctgcggc agtgtgccgt cggcgctgcg catgaagctg gcggtgaacc
     4801 tgtacctgat cacgctggtc accggcctgg ccgaagccgt gcacttcgcc gaagcccacg
     4861 gcatcgagct ggaacgcttc gcgcaggtac tcaatgccgg gccgatggcc agtgaggtgt
     4921 cacggatcaa gctggacaag atggcccgtg gcgattttgc cgtgcaggca tcgatcaccg
     4981 atgtacacaa gaacagcgcg ctggtggccg ccgctgcacg cgaggcaggc atgcatgcac
     5041 cgctgatcga ggccagcgat gccttgttcg cacaggcaga gcacgcaggt ctgggcgcgt
     5101 tggacatggc cgccgtgctg gaggtggtcc gcgccggtcc gggtggtacc gaccgggcct
     5161 gatcggaatt catcttccgg cactcctgcc gtccccggcc gctgctatat tcagcccagg
     5221 tcggcaggca cggtgcctgc cctcgaatca cagggagttg gacatgggtc tggtacaggc
     5281 ggtgaagggt gcggttggcg gtgtgctggc cgaccagtgg aaggacttct acaccgtgcc
     5341 cacgggcctg ccgtccacgg cggccctgtt cgcagcggtg ccgcacggca ccaatgccgg
     5401 ccgcggctcc aacaccagcg gctcgtccaa catcatcagc aacggctcga agatcatcgt
     5461 gccggaaggc tacggcctgc tgctgttcca ggatggcgcg atcaccgcat tcgtcgccga
     5521 agcgggcggc tacgagtggc gctcggacga tctgaactcg cagtcgatct ttgccggcga
     5581 cggcctggtc agcaccttca tcaagcagag ctgggagcgc ttcaagttcg gcggccagcc
     5641 gggctcgcag caggccgcct acttcgtgtc gctgaaggaa ctgccggaca accgtttcgg
     5701 tacccagtcg gagatctact gggacgacgg cttcctcaac acccaggtcg gcgcggtcac
     5761 tcgtggctcg tacacgctga agatcgtcga cccgatcctg ttcgtgaaga acttcgtgcc
     5821 ggccagctac ctgcagccgg gccaggtgtt cgatttcacc gacctggaca acgccgccgc
     5881 cagccagctg ttcaatgaag tggtcggttc gctggccccg gccttcagcc tgtacacgaa
     5941 cgatcctggc aagggcaacc gcatcaccaa gctgcagcag gattcgatcg gcttcgcgca
     6001 gagcctgtcg gccgcggtcg agcaggcgta tcagtggcag agcgatcgcg gcctggccat
     6061 cgtcaagacc gccatcgttt ccatcgagta cgacgccaac acccgcgagc tgctgaaaac
     6121 cgtgcagcgc gccgatgcgc tgtccggctc gcgcggcaac tccaacctgc aggccagcgt
     6181 cgcccagggc atccagtcgg ccggcgagaa cggcggtgcg gcagggcttg tcggtgtcgg
     6241 catggcctcg ggcatgttcg gtgtcggcgg catgcagcag ccggtgacgc cggccgcgga
     6301 ggatccggtg gccaagctga agaaggccaa ggaaatgctg gacctgggcc tgatcaccca
     6361 gagcgactac gacgccctga aggccaaggc actgggcctg taacggcagg acgcacaacg
     6421 aacatgtccg atccccgaaa cggccctccg ccgctgcccg gatccgcgcc cgcgacgccg
     6481 ccgcccttgc cggcggcgtc gttgaatgga ccgggttccc cgcaggacgt ccctcccctg
     6541 cccggcagct tcccgctgga cacctcgacg ctgccacagg ctatccgcga tgaagtggag
     6601 gcccctgacc cggtggccat cgacacctcg gccagcgagc tgaaggacgg cctcaaccgc
     6661 tgcccgaagt gcggcgccac cgacatccgg cccaaggccg gcaccgacat cctggtctgc
     6721 ctgtactgcc gtcacgaatg gcatggcgcg cgggtcgagg aggaattcgg gctgggcgaa
     6781 gccatcgacc agctgcgtgg caccgtcatc gcctccggcg cgcgtgacat cgacgcagat
     6841 acctctgcgc tgatgacctt caagtgcacc ggctgcggcg ccgaggtcac ggtcaatacc
     6901 gaaagcacga tgacggcgcg ctgccactgg tgccgccatg tgttcggcgt caacgaacag
     6961 atcagcaacg gcgcggtacc cgatgccgtc cttcccttcc atatcaagaa ggacgatgcc
     7021 gtcgcgcgca tccgccagtt cgtcgacaag cgccggatgt tcgcgctgaa ggcgttcaag
     7081 caggagttca ccccggaaaa cgtggtgggc gtgttcctgc cctacatgat cgtcgatggc
     7141 aatgccagcg cggccgtggc cggcaagggc gagatccaga cccgccagta cacggtaggc
     7201 agcgagaaga acaagcgcac cgtctatgac gccgacatct atcagatcga gcgccaggtc
     7261 gacttcactg ttgacgatct gccgctggaa tcctccgccg agcgcggcaa tctggatgtc
     7321 cgcgccaaca ccaacaacat catcaacacc atcctgccgt tcgacaccaa gaacgcggtg
     7381 aagtggaatg cctcgtacct ggcgggcttc acttccgaga agcgcaacct ggacgtggag
     7441 aagctgcggc cgcgactgga agaccagctg ctgtccattg cgcgctcgca ggtggaatct
     7501 tcggtacgcg gctacaaccg tggcgtgcgc tgggagcagg aacagctgga agtgcatggt
     7561 acccgctggg tatcgatgta cctgccggtc tggctgtact cgtaccacca gcccggcaag
     7621 aacggcggca tgctgcacta catcgcagtg aacggccgta ccggcgaaac catgggcagc
     7681 gtgccggtgc agcaatggaa gatgctgctg gcggcgttga ccgccggcac ggtcatagaa
     7741 gcactggcaa tcctcatcct gatggcaacc tcatgagcga cgatagcggc ctctggctgt
     7801 tggcggcagg tccggccggc gcaaccgcgc tgtactgggc gctgtaccgc tattaccgca
     7861 acaccgacaa atcgcattcc ttcgagcacg agaccgaggt caaggcgcaa ccggtcaccg
     7921 gctccaacca gaaggtgggc caggtgcgtg gcaccgaggc cacgcgcatc gaaggcgaca
     7981 acgtgtacca gtaccggata cgggttgcac gggtaaagcc cgatcggtag agccaggcca
     8041 tgcctggctg atcgacgacg ccgcaacgac gacggtgaac ggcttcaggc cgcagcggtc
     8101 tctacccgct gtcgtctgtg gcgtgcttcg cagatcgtcg ccgtagcgca tgcctatact
     8161 accgccgctt cccatccggc catggctgca cctgccggtg gaagcggcgg ggctggatgt
     8221 ccccgtcggg ccggccgccc tgctgccgcc ggccttgcca gtgatttgta acccaacgcg
     8281 gttcaaccaa tcaccagggg gaaggctatg cgctacacac gtcgtgattt tcttgccacc
     8341 accgccagcg cttcattggc gtcactggtc gcgcccgcag cctgggccag cggcaccaca
     8401 ccggccgaaa aggccgtgca ggcccgctac caccgctaca acgtcaccag tcccgagggc
     8461 cagcgcatgc tggccagcta cgcgcgcggc atcaatgcca tgctgaaatt gccgccggac
     8521 gatccacgca actggttccg caacgccttc gtgcacctga tggattgccc gcacggcaac
     8581 tggtggttct acgtttggca ccgcggctat gtcggctact tcgagcagac catccgcacg
     8641 ctcagcggtg atccgcagtt cgcgatgccc tactgggact ggaccgagct gccgcgtatt
     8701 cctcctgcga tgttcgatgg cgtactcacg cccaccgaca gcgcctatgc gccctatacg
     8761 cgcaacctgg cggtgttcac ccggttcatg cgcccggcgc tgcagcgcta ctgggacaag
     8821 ctcgacgcgg gccaacgcgg ccagctcaag ttgcgcggct atctcacggc cgacgatgtc
     8881 tggaacgacg tgaccggata cagcgccacg gagaagaccg gcatttccgg caatgcggcc
     8941 tatgcgatca cctgtggtgc ccgctacctg tggcgcgaga atccgggctt cgatgccaag
     9001 acggcctcgg cggtgtctcc cgacacgatc catgcggggc tgtcgccggt ggacttctac
     9061 aatgccgatg taagccgcag cttcaccagt tcacgcacgg cgtcgcacgt ggtgccgcct
     9121 gatggcgcca cgaaattctc ggtgcttgag ggtttcccgc acaacaaggt gcacaactgc
     9181 atcggcggtg tcggcgcggt cgatcccggt ccctacggca acatgaccaa cttcctgtcg
     9241 ccgctggacc ccatcttcta cctgcaccac gccaacatgg accgcctgtg ggacgtgtgg
     9301 aaccagctgc agcaatcgcg gggcaagccg atcatgccgg tcgacgtcga ccagcgacgc
     9361 cagttcatga acgagccgtt ccgcttcttc gtcaatgccc agggcggctt cgtcggcgag
     9421 cgtccggcaa gcgcgttttt ctccaccacc gccttcgact acgactacgt ctatccgggc
     9481 cgcaacgacc tgctgcaggc ggcagcgctg cctgcagccc ccggtgcggt acggctggtc
     9541 cgcggcacgc ggtccgatgg cgccgtccgc gtcgcggttc ccaacgaagc ggtgcgcgcg
     9601 cacctcgcca cgtccgcacc gcgccagctg attgccgaag tcacgctgga gcgcccacag
     9661 gggttgaaca atacgcgcga gttcgacgtc ctggtcaatg cacccgccgg cacctcggcg
     9721 gttgccgccg acagccccta ttacgcgggc acggtctcgt tcttcgggcc cagcatgcca
     9781 ggcatggacc acagccatcc caccaccttt gcggtgccct tgccgcagaa gctgggagcg
     9841 ctgcaggcag tcaaggccgc cgatgacggc acgaccacgc tggagatccg cctggtcgca
     9901 tcgaccggcc aggcgccgca gacgttcccg gtgctggacg cctcgatcct ggtcgcaccg
     9961 ctgcaaccct gatggacgcg ggcgggtgcc ggcctggccg gcatccgtcc ggcacaccac
    10021 gcccctcagc ccgcctgccc cagtcgcacc ttcagctgct ggatctcctg ctcgctcact
    10081 ccgatcgact tcaggtagcc ttcggcgctg ccgtactggc tgtgcagcgc ggcgaggaac
    10141 tgctccatgt tgtccggtgc ggtaccggac atgccggcca tcttgcggcc gatctccggg
    10201 ttctgcttga tcagcgccat gatctgggcg ttcatcgcgc tgtccttcgg ctgcccttcc
    10261 aggtagtgcg cggagatcgc atagttgtgc acgatctcgg cctttggcac cccggccagg
    10321 tccagcagca gccccgcaat gatgccggtg cggtccttgc ccgcggtgca atggaacagc
    10381 accgccccgt cctgctgtgc ggcgatgcgc tggaacacct gcttgaactg cgactggctg
    10441 tggcccagcc actgcacata ggcctcgccc agtgaatccg ggaagctggt catcatcttc
    10501 tgcaggtcca tcttctcggt gcccatcagc gagatgcgct gatagtcgaa gcgatcatcc
    10561 ttggccagca ggtctggcga ctgtgcctct tcgtccgcgg tgcgcaggtc gatgtccagc
    10621 ttcacgccgg cagcggccaa tgcatcgcga tcggcgtcgg tcagccggcc gagatcggcg
    10681 gtacgcacga acgcagtagc cggaatcggg ccgtggcggc cctgcaggcc ggcaaaggtg
    10741 cgcacgttcc acgccccctg cagcggaagt acgcgctgcg catcggcggc caccggcttc
    10801 acattggcgg cagcagccgg cttcgcggca acggcctgcg gtgcgtctgc ggccacggcg
    10861 ctcgccgcca gtggcaggct gagcatcacg gccagggcaa gttcggtaga gcggtgcttc
    10921 atgggagtct ccgttcgaat cagaagttga cggccacatc caggccgaag gtgcgggggt
    10981 cgttgaagat gccggtctgg cccagcgccg ggctgttgag cttgtagaac aggtgctgct
    11041 catccagcag gttgcgtgcc cacagcgaga acgacatcgt ggtgccggtg ctgttcaccg
    11101 gcacatccac cagcgccacg cgggcgttca ccacgaacga actgtcagtg agcatctggt
    11161 cgtactcgct ggtgtagtag ccatcggacc agttgccgtc cacatggaac ttcagcgccg
    11221 agaagttggc gaacggcacc aggtagtcgg ctgacaggct gcccgcgttc ttcggcgcca
    11281 gcagcggctg cacggtcacc tgcacgcccg caccgaaggg gtccgtggcg gtctgcgcat
    11341 cgatcttcgt atacgcgtag ttgaggccga gcgtgaggtt gtccaccggc atcacgctga
    11401 actccagctc cgcaccgcgc gacttcccat cactcagtgc attggtggtg accatggtgg
    11461 tgcgggtttc accgctgttc gggtcgaacg gcagcgagaa gtccatctgc ttgtgcgcga
    11521 tggtcgaatc gaacaccgca aggttcaacc gcgcacggtt gtcccagaac tgcgatttga
    11581 agcccagctc ataggcggtc acctcttccg ggccgaacgc ggtgtagttg gtcgaccgcg
    11641 agttggcacc accggccttg aagccagtgc tgtacctggc gtagaccatc gcgtgctcgc
    11701 ccaggtcgta ggcgatgttg accatcgggt cgaagcggct ccagcggtcc ttgaaggcga
    11761 gactcgtcgc cgcaccgttg acgatgtaca ggctgccctt cttgtcatcg cgggtgtagc
    11821 ggcccccggc ggtcaggtgc aggcccggca tcgcctccgg ggtccacgtg gcctggccga
    11881 acacgcccag gctgtcggtc cacgccttgc tggcgcggtc gatgcgaacc cgcgacaggt
    11941 ccagcgggtt ggtggccggg ttcagcgtgt agctgttacc gcccggcccc caaaccagca
    12001 tgttgggcgt ctgcgcattg tcacccgcgg tctcgtggta gtagaacgcg ccgccgagga
    12061 actgcacctg cgcggtgttg ccgatcagct ggaactcctg gctgtactgg tgctggtaga
    12121 cctgggccag gctgtagcgg ccgaacggcg tacccgcgcc accgtaggcc gagatcgcat
    12181 cgaccagtcc catgtcgaac tggccctggg tcagttcacg ataggaactg atcgacttca
    12241 gctccaggtt ctcgttcaag gtccacgaca ggttcaacag atggccactg gtgcggccga
    12301 tgttgtcttc ctgcgggccg cccaggatgg cgctgtcgcg gcggtcgaga ctggccccgg
    12361 ccttctgcag cgggctgagg taggcgccgg gcaccagcac ctgggtgtgg tacggcgtgg
    12421 tcgcatcgta ggaacggtcg aacgcgtaca gcagcgagaa accatcgctc ggctgccaca
    12481 gtgcgctcaa ccgagcgcca cgcttgtcgt agctgttgaa gtcgcgctcg ccgcgcatcg
    12541 ggttgtcggt ggtgccgcca cgcttggcct gcaccgcgtc gatcttgaag ctgacatcgc
    12601 ccagcttggg caggtccagg tgcagcgcgc tgttgtagcc gctgtagttg gacacaccgg
    12661 cactgacgcg gccgccgaat tcaccggtcg gcgccttggt cacgatgctg accgcaccgc
    12721 cttcggtgtt gcggccgaac aacgtgccct gcggtccctt cagcacttca atgcgctcca
    12781 cgtcgtagag catgctgccc aggccctgcg cgcggcccat gaacacgccg tcgacgtaga
    12841 tgccgacgcc ggcatcgcgc gccggctggt tggcatcgcc ggacgcaccg atgccacgga
    12901 tgccgatgtt cagcgccgaa ctgcgggtcg cgaacggggt cacccgcagc gaaggaatcg
    12961 agccatcgga caggctgccc agcgaaatcg cgctgcgatc cttcaacgcc tcggcatcga
    13021 ccaccgacac cgaaatcggg gtctcctgca ggttggtggc gcgtttctgc gcggtcacca
    13081 ccacctggtc aagcgccacc accgttcgcg ccgcgtcggc agaggcagtg gcatcggctt
    13141 cggcatgggg gccgtcttcg gcatgggcca tcgccggcag cgcggcggcg atggcgaggg
    13201 tgagcagcgg gcggtgcagc gtggcgtagc gcatcggact cgttcgcgga aggagaaggc
    13261 cggcgcagtc tgggagtcgg gaattacaaa tgaatgaccg ttcattcaca ccttttgtga
    13321 cgtactatcc cgtctctgga cgccctgacc tcccgcaatg acgccaaagc ccgccgtagc
    13381 cccactcgtt gatgacgccg ccgccgcaca cgccgaggcc cagcgccggc gcatcctcga
    13441 tgccgcccag aagtgcttca tcactcgcgg cttccacgcc ggttccatcg gcgatatcgc
    13501 cgccgaggcc gagatcagcc aagggctgat gtaccgctat ttcgccaaca agcggacctt
    13561 gatcctggcc ctgatcgagc gccagctgcg ccacgaccag gcctcgatca gcgaaatgcc
    13621 ggcggcgtcc gatctggtcg atgggctgct ggagtgctac cggcagtggg cgcgcggcgc
    13681 cgtgctgccg atccacggca atgccatcgc cagcgtggcg ctgtacgcgg aaatcaacgc
    13741 cgaagcgcac cgcgacccga tgctggccca ggtactgcgc acccacgaca agcagaccag
    13801 cgccgccatc catgcctggc tgcgccagca cgatgcgcgc ctgggccggc cgattgacga
    13861 ggaagccatc gccgggcgca ccctgctgct gcggctgctg gtggagggcc tggccatgcg
    13921 cgccgtgcgc gacccggacc tgccaccggc acgcgtgcgc gccctgctgg ccgatgcgat
    13981 tgggcgggtg atggccgat
//
LOCUS       DAOKIP010000099        13906 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.099,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000099 DAOKIP010000000
VERSION     DAOKIP010000099.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 13906)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13906)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13906
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.099"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(130..1461)
                     /locus_tag="QEL58_002402"
     CDS             complement(130..1461)
                     /locus_tag="QEL58_002402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003485997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII large subunit"
                     /protein_id="HDS1676862.1"
                     /translation="MQPRNDDIFTPSQLNTLARDLLEGSFPAIWVEAELGSVARPASG
                     HLYFTLKDARAQLRAAMFRMKAQYLKFVPREGMRVLVRGKVTLYDARGEYQMVLDHME
                     EAGEGALRRAFEELKARLEAEGLFDPARKRPMPAHVQRLAVITSPTGAAVRDVLSVLG
                     RRFPLLEVDLLPTLVQGSSAAAQITRLLQAADASGRYDVILLTRGGGSLEDLWAFNDE
                     ALARAIAASRTPVVSAVGHETDFSLSDFAADLRAPTPSVAAELLVPDQRELALRLRRT
                     AARMVQLQRHAMQQAMQRADRALLRLNAQSPQARLDLLRRRQLDLGRRLHAAFNQQQE
                     RRAARLRHAAAVLRGHHPQRQLDAMQRRLTALRGRPQSAMQRLLERDALRLRGLARSL
                     EAVSPLATVARGYSILTRSDDGALVRHVGQVQPGDALQARVGDGVIDVQVK"
     gene            complement(1506..2576)
                     /gene="queG"
                     /locus_tag="QEL58_002403"
     CDS             complement(1506..2576)
                     /gene="queG"
                     /locus_tag="QEL58_002403"
                     /EC_number="1.17.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA epoxyqueuosine(34) reductase QueG"
                     /protein_id="HDS1676863.1"
                     /translation="MSPVPAPVDPAQAVQRIRELARAHGFQRCGIAGIELGEDEAHLA
                     DWLGQGLYGTMDWMARHGTLRARPAELLPGTVRVISVGMDYSHKDDTEAWATLADPGR
                     AYVARYALGRDYHKLMRNRLQKLATQINDEVAPLGYRVFVDSAPVLERALARNAGLGW
                     IGKHTCLIDRHGGSWFFIGEIYIDIPLPIDTPATAHCGTCTRCIDVCPTQAIIGPQRL
                     DARRCISYLTIEHDGAIPEDMRPLIGNRIYGCDDCQLVCPWNKFARRTDEADFRARNQ
                     LDTARLDQLFAWDEAEFLRRTEGSPIRRSGHERWLRNIAVALGNAPASAEALAALHTR
                     IDDPSPLVREHVQWALGQHAAR"
     gene            2600..4084
                     /locus_tag="QEL58_002404"
     CDS             2600..4084
                     /locus_tag="QEL58_002404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-hydrate dehydratase"
                     /protein_id="HDS1676864.1"
                     /translation="MPDLSLLFDTAAARALDRRASALAGDGGWSLMAQAGLAGWQCLL
                     QQWPEALQLCVLVGAGNNGGDGYVLASHALRSGRQVQVVTLPGRAPATVLAARAAAEF
                     ATAGGSVVEFDGQLPDAEVYVDALFGLGLDRAPSGTAQALIDALNAARGPVLAMDVPS
                     GVDADSGCVPGVAVKADVTLQFIACHRGLYTGDALEQVGQRRLAPLELPDQAWDGIQA
                     SAQRWTGDRLKALLPPRRANTHKGESGHVLCVGGNHGSGGAIAMAAEAALRAGAGLLS
                     LGTRRDHVGPLLARLPEAMTHALEDGDALPALLDRATVVAIGPGLGQDEWARALFARV
                     LACGKPLVVDADALNLLAQDPRALPDAILTPHPGEAARLLGCSSADIQANRYASAQAL
                     AERFHAVVVLKGAGSIVAAPAQTPRLIAAGNPGMAVGGMGDLLTGIIASLRAQGLAAF
                     DAAAAGALLHALAGDAAAADGARGLLPTDLLAPLRRLANPDLSP"
     gene            4081..4563
                     /gene="tsaE"
                     /locus_tag="QEL58_002405"
     CDS             4081..4563
                     /gene="tsaE"
                     /locus_tag="QEL58_002405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014647814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     ATPase subunit type 1 TsaE"
                     /protein_id="HDS1676865.1"
                     /translation="MTEFFLADSDATELLGQWLAATRPPQALIELRGDLGAGKSTTAR
                     ALLRALGVQGAIRSPTYTLVERYPLASGGEAWHLDLYRIGQAGELDFLGLDEGSAVLW
                     LVEWPERGAGALPPTDLVVALEIEGKGRRVRLTGASDAGREWLERLPQGDDLQAISVG
                     "
     gene            4646..6208
                     /locus_tag="QEL58_002406"
     CDS             4646..6208
                     /locus_tag="QEL58_002406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HDS1676866.1"
                     /translation="MRPGNRLIAICAAVGLGLASVSAWAGEVRQVLLNTGATGTRAEI
                     SLVGSGGYKTLSLAGPNRLVVDFPDSSAIRNLKMPAAQGVVTAVRTGQPVPGTFRVVF
                     DLAESVAPFRPQMQREGNESKLVIEWPGDGPAVAASRPAVTPAVQPQTPVSTPAPTAV
                     ESAQSRNDAARATALLTAQVQQQASAAAATPATPTPAPSTAPAQVAAAGTAASSTPSS
                     SPAAILAGQRTAAVVTTPPATVPAPAPTPVEPPRPAMPSDASRIRMQAGMRHLVVAID
                     PGHGGQDPGAIGPTGKREKDVTLAVARELARQVNATPGLKAYLTRDSDVFIPLPMRAQ
                     KARANKADIFISIHADAAENRSATGSSVYVLSTKGASSQRARWLADKENAADLVGGVR
                     LQQTEGTLANVLLDLAQSGYMKASEDAAGHVLGGLKRIGNNHKPNIERANFAVLRTSD
                     MPAMLVETAFISNPDEERRLIDPAYQRKIAGAVLDGVHTFFSRQPPPGTLYAARAQAE
                     IDAAGTMAGGSK"
     gene            6359..8263
                     /gene="mutL"
                     /locus_tag="QEL58_002407"
     CDS             6359..8263
                     /gene="mutL"
                     /locus_tag="QEL58_002407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair endonuclease MutL"
                     /protein_id="HDS1676867.1"
                     /translation="MTSAAHPRPIRPLPDILINQIAAGEVVERPASVVKELVENAIDA
                     GASRVDIDLEEGGVRLIRIRDNGSGIAPEQLPLAVSRHATSKIADLDDLESVATLGFR
                     GEALPSIASVSRFTLASRRAHDEHGSALQIEGGKIGEVTPRAHAPGTTVEVRELFYNV
                     PARRKFLRAERTELGHIEEWLRSLALARPDVELRVSHNGKASRRYKPGDLYSDARLAE
                     TLGEDFANQAVRVDHSGAGLRLHGWIAQPHYSRASADQQYLYVNGRSVRDRSVAHAVK
                     MAYGDVLYHGRQPAYVLFLELDPTRVDVNVHPAKHEVRFRDSRLVHDFVYRTLKDALA
                     DTRAGMSAQEIGAVPAHPVDAATTPMASSAGASGFGLVRGPAPGSGSGGGGGFSGWRP
                     QQPLGLQVADAPAAYAALYAAPSGAERGATLPPMPSENGLPVTSADAGVPPLGYAIAQ
                     LHGIYILAENAEGLIVVDMHAAHERIGYERLKNAHDGIGLQSQPLLVPITLAVGEREA
                     DTAESEAETLAALGFEVTRAGPGSLHVRSIPALLAHAEPEGLLRDVLTDLREHGQSRR
                     VASARDELLSTMACHGAVRANRRLTVPEMNALLRDMEITERSGQCNHGRPTWARFSLA
                     EIDRWFLRGR"
     gene            8275..9204
                     /locus_tag="QEL58_002408"
     CDS             8275..9204
                     /locus_tag="QEL58_002408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006379886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1684 domain-containing protein"
                     /protein_id="HDS1676868.1"
                     /translation="MRYRGMGGLLAAMVLAACSPATPPAPTVTEDPAFAAAQQQWRVA
                     RYQDLTRPDGWTALVGLHWLQNKSHFVGSGATNGIRLAVGPGKLGLLRREGTQWWFTP
                     EAGAEVSHEGQPVRGRIRVDTDKDAQPTLLSFDAGKGQLSIIRRGPRDALRVKHADAP
                     ARRDFAGLEYWPGGPGWQVQARFIAHPPGKTLPIVDITGLTTEMPNAGAVEFQRDGRN
                     WRLEAIGAPGQPLFLIFADRTSGRGSYPAGRYLDTDAPAADGTVRIDFNHAYNPPCAF
                     TAYATCPLAPPENRLDLRVEAGEKAYHLPEGEG"
     gene            9206..10165
                     /locus_tag="QEL58_002409"
     CDS             9206..10165
                     /locus_tag="QEL58_002409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008264684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TraB/GumN family protein"
                     /protein_id="HDS1676869.1"
                     /translation="MPIRDLFRAATLLLACAVAPLVAARNAPAVDPAAAAAAAKPPVP
                     LLWKVTGPGDSRLYLLGSFHLLKPQDYPLSPDVEQAFEASQRIVFELSPEDMQSPQLA
                     SRMVQAAVRTDGSELKRDLDAATWQKLQAFAAQNALPLAQMQGMKPWFVGLSISIGQM
                     QKLGLDPALGLDRHFMERAQKTGRKTAGLEDIDTQIGMLDGMTAQEQRQMLSEALDQA
                     GKGDEQARLLHDAWRRGDERLLWTKMAAEMRQQYPQLYQRINTGRNDAWVPKLLPYLQ
                     AGQGGTLVVVGTLHLLGNDGVVEKLKAKGYKVERVCTGCRAKR"
     gene            complement(10240..10779)
                     /gene="phaR"
                     /locus_tag="QEL58_002410"
     CDS             complement(10240..10779)
                     /gene="phaR"
                     /locus_tag="QEL58_002410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyhydroxyalkanoate synthesis repressor PhaR"
                     /protein_id="HDS1676870.1"
                     /translation="MAATRIIKKYPNRRLYDTEISSYITIEDVRQLILDGEDFEVRDA
                     KSGDDLTRSVLLQIIADQEQDGEPMLSTQLLSQLIRFYGDSLQGFMGNYLERSMQVFL
                     DQQQQFRQQMGNLLGQTPWAMMNQLTERNLELWQEFQRSMGTGFGGPRPGGTGTGTGS
                     STGNKPNEPGSGTGGKTRR"
     gene            complement(10963..11703)
                     /gene="phbB"
                     /locus_tag="QEL58_002411"
     CDS             complement(10963..11703)
                     /gene="phbB"
                     /locus_tag="QEL58_002411"
                     /EC_number="1.1.1.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014090372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetoacetyl-CoA reductase"
                     /protein_id="HDS1676871.1"
                     /translation="MTSRVALVTGGTGGIGTAICQRLADQGHRVATNYRDEAKARAWQ
                     QAMTERGYTVSIFPGDVSDPGSAEALVRAVEAELGPVEILVNNAGITRDTTFHRMRVD
                     QWHDVINTNLNSVFNVTRPVIEGMRRRGWGRVIQISSINGLKGQYGQANYAAAKAGMH
                     GFTISLARENAGFGITVNTISPGYVATDMVMAVPEDVRAKIIADIPTGRLGKPEEIAY
                     GVCFLVADEAAWITGSNLDINGGHHMGW"
     gene            complement(11721..12641)
                     /gene="gluQRS"
                     /locus_tag="QEL58_002412"
     CDS             complement(11721..12641)
                     /gene="gluQRS"
                     /locus_tag="QEL58_002412"
                     /EC_number="6.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA glutamyl-Q(34) synthetase GluQRS"
                     /protein_id="HDS1676872.1"
                     /translation="MTSPIPTGRFAPSPTGLLHPGSLLAAFGSWLLARHHGGLWRLRI
                     EDVDPPRTVPGAADSQLQALAAFGLVHDGPILWQSTRGGAYQAALDVLLASDLAFICH
                     CSRSELAASGGIHHRCVARQARSDPAVRFRVPAGSVVQFDDGLRGPQQQDVHAEVGDF
                     VLRRADGCWAYQLAVVVDDAAQGVTEVVRGADLLDSTARQILLQQALGLAVPRYWHLP
                     LLLDAPGHKLSKSLAALPVDSARPLPVLRQLWQLLGQAPAALDQAHDLDALLASAQQA
                     FDPARLPRTDILLPPGALSTPMLQNPPSPT"
     gene            12735..13601
                     /gene="htpX"
                     /locus_tag="QEL58_002413"
     CDS             12735..13601
                     /gene="htpX"
                     /locus_tag="QEL58_002413"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease HtpX"
                     /protein_id="HDS1676873.1"
                     /translation="MFTRIALFLATNFAVLILASIVMSLLGTDPSKMSGLLIMAGIFG
                     FGGSFISLLLSKWMAKRSTGAVVITEPRNQTERWLLATVERQAKAAGIGMPEVAVYEG
                     PEINAFATGANRNNALVAVSTGLLHNMSEDEAEAVLGHEIAHVANGDMITMALLQGVL
                     NTFVIVLARVVGGIIDSALSGNREGGGRGFAYYIIVFVLEMVFGLFATMISMWFSRHR
                     EFRADAGGASLAGRQKMIAALERLQLNHGQSTLPTQIAAFGIAGSTAKKLFMSHPPLE
                     ERIAALRASTVA"
BASE COUNT         2150 a         4645 c         4904 g         2207 t
ORIGIN      
        1 cccgcactcc gacaccgccc cgccatccca cggaatgctc gcttttgacg ttgacgttga
       61 cgttgacgtt gacgttgcct tggcttgaag cctcggcagg tgcagggcgc agccctgccg
      121 aacaaccctc tacttgacct gcacgtcgat cacgccgtcg ccgacgcggg cctgcaacgc
      181 gtcacccggc tgcacctggc caacgtgccg caccagggcg ccatcgtcgc tgcgggtgag
      241 gatgctgtag ccacgcgcca cggtcgccag cgggctgacc gcttccagtg agcgtgccag
      301 cccgcgcagg cgcagtgcat cgcgttccag caggcgctgc atcgcactct gcggacgccc
      361 gcgcagggcg gtcaggcggc gctgcatcgc gtccagctgt cgttgtggat ggtgcccgcg
      421 cagcaccgcc gcggcatgac gcaggcgcgc ggcacggcgc tcctgctgct ggttgaatgc
      481 tgcgtgcagg cgccggccga ggtccagctg gcggcgacgc agcaggtcca ggcgggcctg
      541 cgggctctgt gcgttcaggc gcagcagggc acggtcggcg cgctgcatgg cctgctgcat
      601 cgcgtgccgt tgcagctgca ccatgcgcgc cgcggtgcgg cgcaggcgca gcgccagttc
      661 gcgctggtcc ggtaccagta gttcggcggc caccgatggc gtcggcgcgc gcaggtcggc
      721 agcgaagtcg ctgaggctga agtcggtctc gtggcctacc gccgatacca ccggggtgcg
      781 gctggccgca atcgcgcgag ccagcgcttc atcgttgaac gcccacaggt cctccagtga
      841 accgccaccg cgggtcagca ggatcacgtc gtagcggccg ctggcatcgg cggcctgcag
      901 caggcgggtg atctgcgccg cggcgctgct gccctgtacc agggtcggca gcaggtccac
      961 ttccagcagc gggaagcggc ggcccagcac gctcagtacg tcgcgcacgg cggcaccggt
     1021 gggcgaggtg atcaccgcca ggcgctgcac atgcgccggc atcggccgct tgcgtgccgg
     1081 gtcgaacagg ccttcggcct ccaggcgcgc cttcagttcc tcgaacgcgc ggcgcagtgc
     1141 gccttcgccg gcttcctcca tgtggtccag caccatctgg tactcgccac gggcgtcgta
     1201 cagggtcacc ttgccgcgca ccagcacgcg catgccttcg cgtggcacga acttcaggta
     1261 ctgcgctttc atccggaaca tggctgcacg cagctgcgcg cgcgcgtcct tcagggtgaa
     1321 gtacaggtgc ccggaggcag ggcgcgccac gctgcccagt tcggcctcca cccagatcgc
     1381 cgggaagctg ccttccagca gatcgcgggc cagggtgttg agctggctgg gggtgaaaat
     1441 gtcgtcgttg cgtggctgca tgggcacggc atggggcggg tggaacgggg gctcaggatc
     1501 gcacgtcagc gcgccgcgtg ctggcccagc gcccactgca cgtgctcgcg caccagcggc
     1561 gagggatcgt cgatgcgggt gtgcagggca gccaatgcct cggcggacgc aggcgcattg
     1621 cccagcgcca ccgcgatgtt gcgcagccag cgctcatgcc cgctgcggcg gatcgggctg
     1681 ccttcggtgc ggcgcaggaa ttcggcctcg tcccaggcga acagctggtc caggcgcgcg
     1741 gtatccagct ggttgcgtgc acggaaatcg gcttcgtcgg tgcgcctggc gaacttgttc
     1801 caggggcaga ccagctggca atcgtcgcag ccatagatgc ggttgccgat cagcggccgc
     1861 atgtcctcgg ggatggcgcc gtcgtgctcg atggtcaggt acgagatgca gcgccgcgca
     1921 tccagccgtt gcgggccgat gatggcctgg gtggggcaga cgtcgatgca gcgcgtgcag
     1981 gtgccacagt gagcggtggc cggggtatcg atcggcagcg ggatatcgat gtagatctca
     2041 ccgatgaaga accaggagcc gccgtgacgg tcgatcaggc aggtgtgctt gccgatccag
     2101 ccgagcccgg cgttgcgcgc cagtgcacgt tccagcaccg gcgccgaatc gacgaagacg
     2161 cggtagccca gcggagccac ctcgtcgttg atctgcgtgg ccagtttctg caggcggttg
     2221 cgcatcagct tgtggtagtc gcggcccagc gcatagcgcg ccacgtaggc gcggccggga
     2281 tcggccaggg tcgcccaggc ctcggtgtcg tccttgtggc tgtaatccat gcccaccgag
     2341 atcacccgca cggtgccggg cagcagctcg gccggacgcg cgcgcagggt gccgtggcgc
     2401 gccatccagt ccatcgtgcc gtacaggccc tggcccagcc agtcggccag gtgcgcctca
     2461 tcctcgccca gctcgatgcc ggcgatgccg cagcgctgga agccatgcgc acgggcaagt
     2521 tcacggatgc gctgcacggc ctgggccgga tcgacagggg cggggacggg ggacatgtgc
     2581 accagtataa aatccctgca tgcccgatct ttcccttctg ttcgataccg cagcggcgcg
     2641 cgcgctcgat aggcgcgcat cggcgctggc cggtgatggt ggctggagcc tgatggctca
     2701 ggcgggtctg gccggctggc agtgcctgct gcagcagtgg ccggaggctc tccagctatg
     2761 cgtgctggtc ggtgccggca acaacggtgg cgacggctac gtgctggcca gccatgccct
     2821 gcggtcgggg cgccaggttc aggtggtcac gctgcctggc agggcgcccg ccacggtgct
     2881 ggcggcgcgg gctgcagcgg aatttgcgac ggctggtggc agtgtcgtcg agttcgatgg
     2941 ccagttgccg gacgctgagg tctatgtgga cgccctgttc gggcttggcc tggaccgggc
     3001 accgtccggc acggcccagg cgctgatcga cgccctcaac gcggcgcgtg ggccggtact
     3061 ggcgatggac gtgcccagtg gcgtcgatgc cgacagcgga tgcgtgcccg gcgtggcggt
     3121 gaaggccgac gtcacgttgc agttcatcgc gtgtcaccga ggcctgtaca ccggtgatgc
     3181 gctggagcag gtcggccagc gccggctggc gccactcgaa ctgcctgatc aggcctggga
     3241 cggcatccag gccagcgcgc agcgctggac cggcgaccgt ttgaaggcgc tgctgccacc
     3301 gcgacgcgcc aatacccaca aaggcgaatc cgggcacgtg ctgtgcgttg gcggcaacca
     3361 tggcagcggc ggcgccatcg caatggcggc cgaggcagca ctgcgcgccg gcgccggcct
     3421 gctgagcctg ggtacccgtc gcgatcacgt cggccccttg ctggcgcgcc tgccggaggc
     3481 gatgacccat gcgctggaag acggcgatgc gctgccggcg ctgctggaca gggccacggt
     3541 ggtggcgatc gggcccggcc tgggccagga cgaatgggcg cgcgcgctgt ttgcgcgggt
     3601 gctggcgtgt ggcaagccgt tggtggtcga tgccgatgca ctgaacctgc tggcgcagga
     3661 tccgcgagcg ttgccggacg cgatcctcac cccgcacccg ggcgaggccg cgcgcctgct
     3721 tggttgcagc agcgctgaca tccaggccaa ccgctatgcc agcgcgcagg cgttggccga
     3781 gcgcttccac gccgtggtcg tgctgaaggg ggcgggcagc atcgtggcgg cacccgcgca
     3841 gacaccacgg ctgatcgctg cgggcaatcc cggcatggcg gtgggcggaa tgggcgacct
     3901 gctcaccggc atcattgcca gcctgcgcgc gcagggcctg gccgcgttcg acgcggccgc
     3961 ggccggcgcc ttgctgcacg cactcgccgg cgatgccgct gccgccgatg gcgcgcgtgg
     4021 cctgcttccc actgacctgc tggcgccgct gcggcgactg gccaatccgg acctctctcc
     4081 atgaccgaat tcttccttgc cgacagcgac gccaccgaac tgctcgggca gtggctggcg
     4141 gcgacgcggc cgccgcaggc gctgatcgag ctgcgcggcg acctcggcgc cggcaaatcc
     4201 accactgccc gcgcactgct gcgcgcactg ggcgtgcagg gcgccatccg cagcccgacc
     4261 tacaccctgg ttgagcgcta cccgctggcc agtggcggcg aggcatggca cctggacctg
     4321 taccgcatcg gccaggccgg cgagctcgat ttcctcggcc tggacgaggg cagtgccgtg
     4381 ttgtggctgg tcgaatggcc cgagcgcggg gccggtgcgc tgccgccgac cgatctggtg
     4441 gtagcgctgg agatcgaggg caaggggcgt cgtgttcgtc tcaccggggc cagcgacgcg
     4501 ggacgtgaat ggctggaacg gctgcctcag ggggacgact tgcaggccat ttctgtcggc
     4561 tgacgagaac aaacaccggc aggttacgga ttattaagga aaaaggtgtt gcattccgtt
     4621 cagcgcggtg attgaatcct gagccatgcg cccggggaac cgtctcatcg ccatctgtgc
     4681 cgccgtcgga ctgggtctgg cgagcgtcag tgcgtgggcc ggtgaagtcc gccaggtcct
     4741 gctgaacacc ggcgccaccg gcacccgtgc cgagatctcg ctggtcggca gtggcggcta
     4801 caagaccctg tcgctggccg gcccgaaccg cctggtggtc gatttcccgg actccagcgc
     4861 catacgcaac ctgaaaatgc cggccgcgca gggcgtggtt acggcagtgc gtaccggaca
     4921 gccggttccg ggcacgttcc gtgtcgtttt cgacctcgct gaatcggtgg cgccgttccg
     4981 cccgcagatg cagcgcgagg gcaatgaatc caagctggtg atcgaatggc cgggcgatgg
     5041 cccggccgtg gccgccagcc ggccggcggt gaccccggcg gtgcagccac agacgcccgt
     5101 cagcacgccc gcgccgaccg cggtcgagag cgcgcagtcg cgcaacgacg ccgcgcgcgc
     5161 caccgcactg ctgaccgcac aggtgcagca gcaggccagc gccgctgcag caaccccggc
     5221 cacgccgacg ccggcaccgt ccacggcacc ggcacaggtc gccgcggcag gcaccgcggc
     5281 cagcagcacg ccgtcctctt caccggccgc gatcctcgcc ggccagcgca ccgctgcggt
     5341 ggtgaccacg ccgccggcca cggtgcccgc gccggcgcca acgccagtgg aaccgccacg
     5401 cccggccatg cccagcgatg cctcgcgcat ccgcatgcag gctggcatgc gccacctggt
     5461 ggtggccatc gatccgggcc acggcggcca ggacccgggt gcgataggcc cgaccggcaa
     5521 gcgcgagaag gacgtcaccc tggcggtggc acgcgagctg gcgcgccagg tgaacgcgac
     5581 gccgggcctg aaggcctacc tgacccgcga cagcgacgtg ttcattccgc tgccgatgcg
     5641 tgcgcagaag gcgcgtgcga acaaggccga catcttcatc tcgatccacg ccgatgcggc
     5701 cgaaaaccgc tcggccaccg gttcgtcggt gtatgtgctg tcgaccaagg gggcttcctc
     5761 gcagcgtgcg cgctggctgg cagacaagga aaacgcggcc gatctggtcg gtggcgtgcg
     5821 cctgcagcag accgaaggca cgcttgccaa cgtgctgctg gacctggccc agagcggtta
     5881 catgaaggcg tccgaggatg cggccggcca cgtgctgggc ggcctgaagc ggatcggcaa
     5941 caaccacaag ccgaatatcg agcgcgccaa cttcgcggtg ctgcgcacct cggacatgcc
     6001 ggcgatgctg gtggaaaccg cgttcatctc caacccggat gaagagcgcc gcctgatcga
     6061 cccggcctac cagcgcaaga tcgccggtgc cgtgctcgat ggcgtgcaca ccttcttcag
     6121 ccgccagccg ccgccgggca cgctgtacgc ggcccgcgcc caggccgaga tcgacgccgc
     6181 aggcaccatg gccggcggca gcaagtaacc cgccgaaggc gggtttctgc tttctgtaga
     6241 gtcgactgtc agtcgactac gcgcggagcg cggggggcgt gcccggcaaa ggaccgtcgg
     6301 cgaagggcag tcgactgaca gtcgactcta cccagggccg ctccgctatc atccctgcat
     6361 gacgtctgct gcccatccgc gcccgatccg gccgttgccg gacatcctga tcaaccagat
     6421 cgccgctggc gaagtggtcg aacgtcctgc gtccgtggtc aaggaactgg tcgagaatgc
     6481 gatcgatgcc ggtgccagcc gcgtcgacat cgatcttgaa gaaggcggtg tgcgcctgat
     6541 ccgcatccgc gacaacggca gcggcatcgc gccggagcag ttgccactgg cggtctcgcg
     6601 ccatgccacc agcaagatcg ccgacctgga tgatcttgaa tcggtggcca cgctcggttt
     6661 ccggggggag gcgctgccat cgatcgcctc ggtcagccgc ttcaccctgg cctcgcgccg
     6721 cgcgcacgac gagcatggtt ccgcgctgca gatcgaaggc ggcaagatcg gtgaagtcac
     6781 tccgcgtgcg catgcaccgg gtaccaccgt ggaagtgcgc gaactgttct acaacgtgcc
     6841 ggcgcggcgc aagttcctgc gcgccgagcg caccgaactg ggccatatcg aagagtggct
     6901 gcgttcgctg gcactggcgc ggccggatgt cgaactgcgc gtgtcgcaca acggcaaggc
     6961 ctcgcgccgc tacaagccgg gcgatctgta ttccgatgcg cggctggccg aaacgctggg
     7021 cgaggacttc gccaaccagg ccgtgcgcgt ggaccacagc ggtgccggcc tgcgcctgca
     7081 cgggtggatt gcacagccgc attattcgcg tgccagtgcc gaccagcagt acctgtacgt
     7141 caacggccgt tcggtgcgcg atcgcagcgt cgcccatgcg gtgaagatgg cctatggcga
     7201 cgtgctgtac cacggtcgcc aaccggccta cgtgctgttc ctggaactgg acccgacccg
     7261 ggtcgacgtc aacgtgcatc cggccaagca cgaggtgcgc ttccgtgatt cgcggctggt
     7321 ccatgatttc gtctaccgca cgctgaagga tgcgctggcc gacacccgtg ccggcatgtc
     7381 ggcgcaggag atcggcgccg ttccggcgca tccggtggat gcggccacga caccgatggc
     7441 gtccagcgca ggcgcttctg gattcggact ggtgcgcggt cctgcgccgg gttccggctc
     7501 aggcggcggg gggggattct caggctggcg gccgcagcag ccgctgggcc tgcaggtggc
     7561 cgacgccccg gccgcctatg ccgcgttgta tgccgcaccg tccggtgccg aacgcggggc
     7621 gacgctgccg ccgatgccga gcgagaatgg actgccggtg accagcgccg atgcgggcgt
     7681 gccgccgttg ggctatgcga tcgcgcagct gcacggcatc tacatcctgg ccgaaaacgc
     7741 cgaaggcctg atcgtggtcg acatgcacgc cgcgcacgag cgcatcggct acgagcgcct
     7801 gaagaatgcg cacgatggca tcggcctgca gtcgcaaccg ctgctggtgc cgatcaccct
     7861 tgccgtgggc gagcgcgagg ccgacaccgc tgaaagcgaa gccgaaacgc tggccgcgct
     7921 cggcttcgaa gtgacccgtg ccggccccgg ttcgctgcat gtgcgcagca ttccggcgct
     7981 gctggcgcat gccgagccgg aagggctgct gcgcgacgtg ctgaccgacc tgcgcgaaca
     8041 cggccagagc cggcgcgtgg cgagtgcgcg cgacgaactg ctgtcgacca tggcctgcca
     8101 tggcgcggtg cgtgccaatc ggcgcctgac cgttccagag atgaacgcgc tgttgcgcga
     8161 catggaaatc accgagcggt ccggccagtg caaccatggc cggccgacct gggcccgttt
     8221 ttcactggcg gagatcgacc gctggttcct gcgcggacgt tgaggggagc atcgatgcgt
     8281 tatcggggaa tgggcgggct gctggccgcc atggtgttgg ctgcctgcag cccggcgaca
     8341 ccgccggcgc cgacggtcac tgaagatccg gcctttgccg ccgcgcagca gcaatggcgc
     8401 gtggcgcgct accaggacct gacccggccc gatggctgga cggcgctggt cggcctgcat
     8461 tggctgcaga acaagtcgca cttcgtcggc agcggcgcca ccaacggcat ccgcctggcg
     8521 gtcggcccgg gcaagctggg cctgctgcgc cgtgagggta cccagtggtg gttcacgccg
     8581 gaggccggtg ccgaggtcag ccatgagggc caaccggtac gcggtcgtat ccgcgtcgac
     8641 accgacaagg atgcacagcc gaccctgttg tctttcgacg ctggcaaggg ccagctcagc
     8701 atcatccgcc gtgggccgcg cgatgcactg cgggtcaagc acgccgatgc gccggcacgc
     8761 cgcgatttcg ctggcctgga gtactggccg ggtggccccg gctggcaggt gcaggcacgc
     8821 ttcatcgcgc acccgccggg caagacgctg ccgatcgtcg acatcaccgg cctgaccacc
     8881 gagatgccca atgcgggcgc ggtcgagttc cagcgcgatg gccgcaactg gcgtctggaa
     8941 gcgatcggtg cccccgggca gccgctgttc ctgatcttcg ccgaccgcac cagtggccgc
     9001 ggcagctatc cggccggccg ctacctggac accgatgcac ccgctgccga cggcacggtg
     9061 cgcatcgatt tcaaccatgc ctacaacccg ccgtgtgcat tcaccgccta tgcaacctgc
     9121 ccgctggcgc caccggaaaa ccggctggac ctgcgcgtgg aagcgggcga gaaggcctac
     9181 cacctgcctg aaggagaagg ctgaaatgcc gatcagagac ctgttccgtg ccgctaccct
     9241 gctgctggcc tgcgcggtcg caccgctggt tgcggcgcgc aatgcgcctg ccgttgaccc
     9301 ggccgctgcc gccgccgctg ccaagccacc ggtgccgcta ctgtggaaag tgaccggtcc
     9361 aggcgattcg cgcctctatc tgctcggttc gttccatctg ctgaaaccgc aggactatcc
     9421 gctgtcgccg gatgtcgaac aggccttcga ggcctcgcag cgcatcgtgt tcgagctctc
     9481 gccggaagac atgcagtcgc cgcagctggc cagccgcatg gtgcaggcgg cggtccgcac
     9541 cgatggcagc gaactcaagc gcgacctgga tgcggccacc tggcagaagc tacaggcgtt
     9601 cgcggcgcag aacgcgctgc cgctggcgca gatgcagggc atgaagccct ggttcgtcgg
     9661 cctgagcatt tcgatcgggc agatgcagaa gctgggcctg gacccggcgc tgggcctgga
     9721 tcgccatttc atggagcgcg ctcagaagac cggccgcaag acggccggcc tggaagacat
     9781 cgatacgcag atcggcatgc tcgatggcat gacggcgcag gaacagcggc agatgttgtc
     9841 cgaggcgctg gaccaggcgg gcaagggcga tgagcaggcg cgcctgctgc acgatgcctg
     9901 gcgccggggc gacgagcgcc tgttgtggac caagatggcg gcggaaatgc gccagcagta
     9961 tccgcagctt taccagcgca tcaacaccgg tcgcaacgac gcgtgggtgc cgaagctgct
    10021 gccatacctg caggccgggc agggcggaac gctggtggtg gtcggcacgc tgcacctgct
    10081 cggcaacgat ggcgtggtcg agaagttgaa ggccaagggt tacaaggtcg agcgcgtgtg
    10141 cacggggtgc agggccaagc gctgaagcat cgcgggcgtc atgcaataaa aaacggcgcg
    10201 cccagggcgc gccgttttcg tatccactgc ggtgatggct cagcgccggg tcttgccgcc
    10261 ggtgccgctc cccggttcgt tcggcttgtt gccggtactg gagccggtgc cggtacctgt
    10321 tccgcccggg cgcgggccac cgaagccggt gcccatgctg cgctggaatt cctgccacag
    10381 ctccaggttg cgctcggtca gctggttcat catcgcccac ggggtctgcc ccagcaggtt
    10441 gcccatctgc tggcggaact gctgctgctg gtcgaggaag acctgcatgc tgcgctccag
    10501 gtaattgccc atgaagccct gcagggaatc gccgtagaag cggatcagct ggctcagcag
    10561 ctgggtggac agcatcggct cgccgtcctg ttcctggtcg gcgatgatct gcagcaggac
    10621 cgatcgagtg aggtcgtcgc cgctcttggc gtcgcggact tcgaagtctt caccgtccag
    10681 gatcagctgg cgcacgtcct cgatggtgat gtagctggag atctcggtgt cgtagagacg
    10741 gcggttcgga tacttcttga tgatgcgggt cgcagccatg aagcggtact cgtcacagta
    10801 gacgcgcagc atggcgcagt gcagcagccg ttgcaaccgc ctcagccccc gccaggcttg
    10861 gctttcggcg gcgatcatgt tgcgcagcaa gggtttgcgt gctgcgcagc atgactcttg
    10921 gcaggggccg gcggcgttcg ccgcaacggc ccgctgcgcg gcttaccagc ccatgtggtg
    10981 gccgccgttg atatccaggt tgctgccggt aatccaggcg gcctcgtcgg ccaccaggaa
    11041 gcacacgccg taggcgattt cctccggctt gccgaggcgc ccggtaggga tgtcggcgat
    11101 gatcttggcg cgcacgtcct ccggcaccgc catcaccatg tcggtcgcca cgtaaccggg
    11161 cgaaatggtg ttgacggtga tgccgaagcc cgcgttctcg cgggccagcg agatggtgaa
    11221 gccatgcatg ccggccttgg cggcggcgta gttggcctgg ccgtactggc ccttcaggcc
    11281 gttgatcgag ctgatctgga tgacccggcc ccagccgcgg cggcgcatgc cctcgatgac
    11341 cgggcgggtg acgttgaaca ccgaattgag gttggtgttg atcacatcgt gccactggtc
    11401 cacgcgcatg cgatggaagg tggtgtcacg ggtgatgcca gcgttgttga ccaggatctc
    11461 gaccgggccc agctcggcct cgaccgcgcg taccagcgct tcggcgctgc cggggtcgga
    11521 gacatcgcca gggaagatcg acaccgtgta accgcgttcg gtcatcgcct gctgccaggc
    11581 gcgcgccttg gcttcgtcgc ggtaattggt ggcgacccgg tggccctggt cggccagtcg
    11641 ttggcagatg gcggtaccga tgccgccggt tccgccggtg accagtgcga cgcgagatgt
    11701 catggaatgc tgtccgggta tcaggtgggg gaagggggat tctgcaacat cggcgtggaa
    11761 agtgcgccgg gcggcagcag gatgtcggtg cgcggcaggc gcgccgggtc gaaggcctgt
    11821 tgcgcggagg ccagcagggc atccagatcg tgtgcctgat ccagcgccgc aggggcctgg
    11881 ccgagcagct gccagagctg gcgcagcacc ggcagcgggc gcgcactgtc caccggcagc
    11941 gccgccagcg acttcgagag tttgtggcct ggcgcgtcca gcagcagcgg caggtgccag
    12001 tagcgtggca ccgcaagccc cagtgcctgc tgcagcagga tctgccgcgc ggtggagtcg
    12061 agcaggtcgg cgccgcgcac cacttcggtc acgccctgcg cagcgtcgtc gaccaccacc
    12121 gccagctggt aggcccagca gccgtcggca cggcgcagca cgaagtcgcc gacctcggca
    12181 tgcacgtcct gctgctgcgg gccgcgcagt ccatcatcga actgcacgac gctgccggcc
    12241 ggcacacgga agcggacggc ggggtccgat cgagcctgcc gtgcgacgca gcgatggtgg
    12301 atgccgccac tggcggccag ttcgctgcgg ctgcagtggc agatgaaggc caggtcgctg
    12361 gccagcaaca catccagtgc ggcctggtag gccccgccgc gggtgctctg ccagaggatt
    12421 ggaccatcgt ggaccaggcc gaacgcggcc agtgcctgca gttgcgaatc cgctgcaccg
    12481 ggtacggtgc gcggcgggtc gacgtcttcg atgcgcagac gccacaggcc gccgtgatgg
    12541 cgggcgagca accagctgcc gaacgcggcg agcagggatc cggggtggag caggccggtc
    12601 ggcgagggcg cgaaacgccc ggtgggaata ggggaggtca tgctggctga atcgtcggtc
    12661 aggttggcgc ttgaattcaa gctgaccaca ccgcaaattg accgatatcg accccttccg
    12721 agccggattt tcccatgttc acccgcatag ccctcttcct ggccacgaac tttgccgtgc
    12781 tgatcctggc cagcatcgtg atgtcgctgt tgggaaccga tcccagcaag atgagcggcc
    12841 tgctgatcat ggccggcatc ttcggtttcg gtggttcctt catctcgctg ctgctgtcca
    12901 agtggatggc caagcgttcc accggtgcgg tggtgatcac cgagccgcgc aaccagaccg
    12961 agcgctggct gctggccacc gtcgagcgcc aggccaaggc ggccggcatc ggcatgccgg
    13021 aagtggcggt gtatgagggc ccggagatca acgccttcgc caccggtgcc aaccgcaaca
    13081 acgcgctggt ggcggtgtcc accggcctgc tgcacaacat gagcgaggac gaggccgaag
    13141 cggtgctggg ccacgagatc gcccacgtcg ccaacggtga catgatcacc atggcgctgc
    13201 tgcagggtgt gctgaacacc ttcgtgatcg tgctggcccg cgtggtcggc ggcatcatcg
    13261 acagcgcgct gtcgggcaac cgcgaaggtg gcggccgcgg ctttgcgtac tacatcatcg
    13321 tgttcgtgct ggagatggtg ttcggcctgt tcgccaccat gatctcgatg tggttctcgc
    13381 gccaccgcga gttccgcgcc gacgccggcg gtgcctcgct ggccggccgc cagaagatga
    13441 tcgccgcgct ggagcgcctg cagctcaacc acggccagag cacgctgccg acccagattg
    13501 ccgcgttcgg tattgccggt tcgacggcga agaagctgtt catgagccac ccgccgctgg
    13561 aagagcgcat cgccgcgctg cgggcgtcga cggtggcgta agcctccgta ctttcacggt
    13621 agtgcaggaa cgcctggccc cgcgccgggc gtttttgttt gcgcgccggc tagagtcatt
    13681 tccgcgaccg cggaggggtg tcactttctt tgctcgtgca aagaaagtaa ccaaagaaac
    13741 acgccgccgg ccgcgagccg gtgctgcgca ccggtaccct gcgctcctcg gcccgtcgag
    13801 ggacggtgcg ggaactcgct gcgctcagac acccgcacct cttcgccctc gccggacctg
    13861 cggtgctcgg ctcgcttgaa ggcggactgg aaaatcaaga tcaagg
//
LOCUS       DAOKIP010000100        13883 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.100,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000100 DAOKIP010000000
VERSION     DAOKIP010000100.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 13883)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13883)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13883
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.100"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(335..2440)
                     /locus_tag="QEL58_002414"
     CDS             complement(335..2440)
                     /locus_tag="QEL58_002414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012481655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein"
                     /protein_id="HDS1676874.1"
                     /translation="MSAASSRPPDTARLPHLQQLARRADRRLLIGSAALAVAGLALAL
                     RGPHVPGAALAAAAVLPAIWLAGPQAGHSLARNGLALLLSLQLALLCAMVGLSPALPI
                     AVLLGVLLSHRDRLPVWLAGGVGTLALLQPLLEGAAAGPTLLQATLFAGLTLFLGQAA
                     LRLRQQTEALGHGPRRLAALARDIATGADLGAHADTAAFAPGSLAHALADTARHVQAQ
                     RGREAEAHAENAQIRQALDASRTAMMIADNDHVIRYVNRSVVALLRNQQATLRQAFPD
                     FDAERLVGSSIHRFHANPDRIRAILNGLQVTHNGKVQIGPVHFAQVVTPVFDAQGVRL
                     GFAVEWHDRTHELSLENAVADIVAAAAAGDLDQRLQAGEGASFLEGLTGGINQLLDTL
                     GSTVDEVRQMLSALANGDLDRRMHGEYQGAFAAIQRDANATAGQLARMVGRIQQCSIS
                     ISTAASEIAAGNGALSERSERQAAHLQETAASMEELTATVRQNAAHARQASELAASTQ
                     NAASDGNTAMQRVVDTMQAIEGASKRIGDITGVIDGIAFQTNILALNAAVEAARAGEQ
                     GRGFAVVASEVRVLAQRSAAAAQEIKKLIDEAGRQVGEGAQLVADAGQRMQGIVGGVE
                     SVSHLMREISAASQEQSIGIEQINQTVVQMDQATQQNAALVEEATAAARELRSQAGTL
                     TEAVSVFRQQQAREVALVA"
     gene            complement(2731..3585)
                     /locus_tag="QEL58_002415"
     CDS             complement(2731..3585)
                     /locus_tag="QEL58_002415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005420457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDS1676875.1"
                     /translation="MSLHPFELEVGGARVAGLRNHGEGPRVLALHGWLDNAASFVPLA
                     PHLSSLQLVAIDLPGHGHSAHLPAGASYTTPAAICHVLDVADALGWDRFSLLGHSMGA
                     GIASLTASVSDRIERLVAIEALGGLRGPEEETAHRLREHVNATRALARKQLRVFPDLA
                     APIRARMMTNQLSEGCARLLVERGVEPVEGGYRWCSDPRLMLPTAIRLSEGQIDNLLQ
                     AIACPTQVIYATPAQSYYPEPMRSDRLRHLRDGRLAVFPGNHHLHMEDPAQVAEVILH
                     FFSNDNAD"
     gene            complement(3582..4544)
                     /gene="hemH"
                     /locus_tag="QEL58_002416"
     CDS             complement(3582..4544)
                     /gene="hemH"
                     /locus_tag="QEL58_002416"
                     /EC_number="4.98.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012512523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrochelatase"
                     /protein_id="HDS1676876.1"
                     /translation="MLDAPDTAVLAVNLGTPETPTAPAVRRYLAEFLSDPRVVSIPAL
                     LWQPLLRGLILPLRSSRSAAKYAQVWLPDGSPLMVHTRQLAQAMQALLPTLRVRHAMR
                     YGEPALAAELDRLAAEGARRIVVLPLYPQYSTTTTASVEDRVDAWQRRNPGVTVSLVR
                     DYSVDPGWVEAVAGSIQRYWEQHGRGQKLMFSFHGIPQRLADGGDPYPQRCEASAQAI
                     ANALGLGRDEWQMGYQSRFGRERWLQPYAEPSLWALAESGVKQIDVVCPGFATDCLET
                     LEEVAMGFTETLAERGATMRYIPCLNAEPEHARALARLAVASLA"
     gene            4710..5600
                     /locus_tag="QEL58_002417"
     CDS             4710..5600
                     /locus_tag="QEL58_002417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005420455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ligand-binding protein SH3"
                     /protein_id="HDS1676877.1"
                     /translation="MRRPIQALLIAASLLSSQAMAGPQEDQRARNAVRVLAEIQGIPE
                     QGIPDKLLDEGRAVIVIPDTIKAGLVIGGRRGHGLMSVRMANGAWSNPVFVKLTGGSI
                     GFQAGVQSSDVVLVFRNDRSLDNLVNGKFTLGADAGVAAGPVGRNAAAATDGQLKAEI
                     WSWSRARGLFAGVALDGAVLQIDDAANLDAYGSNTTPRMIFEGRAGGSPSMDVVAFRD
                     RLEEATYAARNNRNGNGGNAPRPAAAPAVAPAPVQAAPAPAEATTAPLQNVPQTPPPQ
                     QQGFQPVNDGEIRTETLGGN"
     gene            5676..5903
                     /gene="tatA"
                     /locus_tag="QEL58_002418"
     CDS             5676..5903
                     /gene="tatA"
                     /locus_tag="QEL58_002418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006449086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase subunit
                     TatA"
                     /protein_id="HDS1676878.1"
                     /translation="MGSFSIWHWLVVLAIVLLVFGTKRLTSGAKDLGSAVKEFKKGMR
                     DEDKPNAQLGDESRSQDASRTAQDEHDRNAR"
     gene            5919..6383
                     /gene="tatB"
                     /locus_tag="QEL58_002419"
     CDS             5919..6383
                     /gene="tatB"
                     /locus_tag="QEL58_002419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase subunit TatB"
                     /protein_id="HDS1676879.1"
                     /translation="MFDIGFSELLVIAVVALVVLGPERLPKAARFAGLWVRRARNQWD
                     SVKQELERELQAEEIKRQMQDVRQGMQDTENQLRASGEAIRREAQQAQQQGDDLAQEV
                     RAPAPADLPPHLGQPVAADQAPAQDVAAVAPSAATATETTATPPAQNTERPS"
     gene            6380..7129
                     /gene="tatC"
                     /locus_tag="QEL58_002420"
     CDS             6380..7129
                     /gene="tatC"
                     /locus_tag="QEL58_002420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014038991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase subunit TatC"
                     /protein_id="HDS1676880.1"
                     /translation="MSEQDFGESSLVEHLVELRGRLVRALLGLGVALLALLPFTQKLY
                     NALAEPLVSQLPNGQTMIATNPAGAFFAPLKLTFFVALFVAVPWLLYQLWAFVAPGLY
                     AREKRLAVPLLVSSVVLFYTGCAFAYFLVLPAVFHFLTTFSPDVIAITPDANAYLDFV
                     LAIFFAFGGSFELPVAMVILVLLGWVTPQQFKEGRGYAIVGIFVVAAVLTPPDVVSQL
                     MLAIPMCLLYELGIHAARWLVPSSVVKKPAA"
     gene            complement(7204..8115)
                     /locus_tag="QEL58_002421"
     CDS             complement(7204..8115)
                     /locus_tag="QEL58_002421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010482409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676881.1"
                     /translation="MKEIRKLPASAGAQWLLDTFSLYRRAPLQLARIGLTWLLVSWVV
                     TLLSTLIPGAAGMAVQLMTLAISPIMFGGMLYAVGEIDEGRPGLASHLLQPIRDHRVS
                     HLLVPLAIQVLAVLLLGALLFMMIGREGFTAFSEVMTKMEEISRSGQQIKPDDAAALV
                     ANLPAKRIALWMLLVFLSAVALSLAMFTQPALVVFDKQSGMHALRLSLQGCIENIGAM
                     IVFAVLGLIAAFCMYILFVIVIQIAMLIGGPLAAAFIAQLVLTTVLMPLYVGAVYAAW
                     KQMFVHRGSRAAPPIPTTPTSSDIFHA"
     gene            complement(8166..8912)
                     /locus_tag="QEL58_002422"
     CDS             complement(8166..8912)
                     /locus_tag="QEL58_002422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010482408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine amidotransferase"
                     /protein_id="HDS1676882.1"
                     /translation="MNPAPFLILETGRPVPSLRRYGRFPHWIRVAAGLEEHETVVVDV
                     EHGGALPDPHGFAGVLVTGSAAFVTDHAEWSERSAAWLRRTAHDDLPVFGICYGHQLL
                     AHALGGEVAYNPAGRESGTIELELQPQAAQDPLFQGLPQHFAAHATHLQTVLRAPDGA
                     EVLARSPLDGCHAFRWGRQAWGVQFHPEFATHHMRGYVRARADCIGRHGGCARSIERA
                     VSAAPLARQLLRRFVRQARLSSAQPAAKQG"
     gene            complement(8884..10719)
                     /locus_tag="QEL58_002423"
     CDS             complement(8884..10719)
                     /locus_tag="QEL58_002423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014648903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II/IV secretion system protein"
                     /protein_id="HDS1676883.1"
                     /translation="MEHRLPVGTPGEAGGVPLPWGRLHFEQIAAALIADGLVAEQDRE
                     RMRFSAQGARNASEVHPLVLLSNLKLAANGGGELTLERLSEWLAQRTGCRYLRIDPTR
                     VDVAAVTALVSHAYARRHRFLPLAVDAERVLVATSEPLVQEWRRDLQHLTRRRIELAV
                     VNPLDLHRYTMEFYGVTRSVRGARGDVRGEASTTLPSFEQLVELGRAGDVNADDQHIV
                     HIVDWLLQYAYEQRASDIHLEPRREMGRMRFRIDGVLHKVFEVPPAVMTAVVSRIKVL
                     GRMDLAERRRPQDGRIKTRSPGGREVEMRLSTMPTAFGEKCVMRIFDPDAAFKSIDQL
                     GFSPQEAAGWNALVERPHGIVLVTGPTGSGKTTTLYSTLKRLATPDVNVCTVEDPIEM
                     IAPEFNQMQVQTNIDLDFASGVRTLLRQDPDIIMIGEIRDLETAQMAVQASLTGHLVL
                     STLHTNDAPSAVTRLLDLGVPHYLLASTLNGILAQRLVRTLCPHCKQPHSLGAADWAV
                     LADSHAAYPDAATPCRPVGCLECRRTGFLGRIGLYELLPLGSRLRGQIRADMDLAGFT
                     RAARAEGLRTLRQAGLEKVAQGLTTIEEVLSVLPPPDEPSSVPDP"
     gene            10804..11715
                     /gene="glyQ"
                     /locus_tag="QEL58_002424"
     CDS             10804..11715
                     /gene="glyQ"
                     /locus_tag="QEL58_002424"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019337946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit alpha"
                     /protein_id="HDS1676884.1"
                     /translation="MSATPTVPITFQGLIQTLNQFWAQQGCVLIQPLDLEVGAGTFHP
                     ATFLRAIGPEGWNAAYVQPSRRPTDGRYGENPNRLQRYYQYQVAMKPAPDNIQQLYLD
                     SLKALGIDPLVHDLRFVEDNWESPTLGAWGLGWEVWLNGMEVTQFTYFQQAGGLECRP
                     VLGEITYGLERLCMYLQNCDNVYDLVWTYGPDGQPVTYGDVYHQNEVEQSTYNFEYAD
                     VDELFHRFDACEREAQKLVEVNLPLPAYEQVMKASHTFNLLDARRAISVTERQRYILR
                     VRALAQAVAKAYYEQREKLGFPGAKKA"
     gene            11803..13878
                     /locus_tag="QEL58_002425"
     CDS             11803..13878
                     /locus_tag="QEL58_002425"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011039155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit beta"
                     /protein_id="HDS1676885.1"
                     /translation="MSQLSPLLIELGTEELPVKALPGLAQAFFDGVVDGLRKRGVALE
                     LGDARPLSTPRRLAVLLPGVGLEQPEQHSEVLGPYLNIALDAEGQPTKALQGFAAKAG
                     IDWTALEKTTDNKGERFVHRAVTPGASTASLLPEILREAIAAMPIPKPMRWGDHAWGF
                     ARPAHWLVLLHGGNVVEAELFGLQAGRVSRGHRFHHDQAVSLAQPQDYVEALRAAFVL
                     VDPSERRARIVAEVEAAAAKAGGSARITEDNLEQVVNLVEWPSAVLCSFEPAFLAVPQ
                     EALIETMEINQKFFPVLDDSGTLTEKFIGIANIESKDVAEVARGYERVIRPRFADAKF
                     FFDEDLKQGLASMGEGLKTVTYQAKLGSVADKVARVAALAEVIAPQVGADAAQARRAA
                     ELAKNDLQSRMVNEFPELQGIAGRHYAVAGGESAEVALAIDEAYQPRFGGDDIALSAL
                     GKVLAIAERVDTLAGGFAAGLKPTGNKDPFALRRNALGLARTIIESGFELDLRALLAS
                     ANAGLAARNVQADVGELYDFILDRLKGYYADKGVPATHFNAVAELKPASLYDFDRRLD
                     AIGTFAALPEAEALAAANKRIRNILRKAEGDIPAQIDPALLQEDAERALAEAVTAAID
                     DTGASLQYKDYVAVLARLARLRPQVDAFFDGVMVNAEDPALRGNRLALLTMLGERLGK
                     VAAIEHLSS"
BASE COUNT         2252 a         4645 c         4819 g         2167 t
ORIGIN      
        1 gtgcgcagga aaatgcattg gccggaatgc accggtagat ccacgccaca tgtggagtgc
       61 tgccgaccat ggttggcggc taccgatgag atggtccgtg cggggtacct cgtggtggct
      121 gtcggtagac ccacgccatg cgtggctgtg tgacgtgggc ctgcgcaatg cgcatgccgt
      181 ggttgccggc cagcggccgg tactaccgat ggatcgatgc cgtcctgcga cgcccatcga
      241 acgggccctt cccgtgatcc gtcacgcaga gcacttaaaa aaaagacggc gccctgcggg
      301 cgccgtctcc aatcgatccg gttgcacgtt cctatcaggc gaccagagcg acctcgcgcg
      361 cttgctgctg gcggaacacc gagaccgcct cagtcagcgt tcccgcctgc gaccgcagtt
      421 cacgcgcggc agcagtggct tcctccacca gtgccgcgtt ctgctgcgtg gcctggtcca
      481 tctgcaccac ggtctggttg atctgctcga tgccgatcga ctgttcctgc gaagcggctg
      541 atatctcccg catcaggtgg ctgacgctct cgacaccacc gacgatgccc tgcatgcgct
      601 ggccagcatc ggccaccagc tgcgcacctt cacccacctg gcggccggct tcgtcgatca
      661 gtttcttgat ttcctgcgca gctgcggcgg aacgctgggc cagcacgcgc acctcgctgg
      721 ccaccaccgc gaatccgcgg ccctgctcgc cggcccgcgc agcttccacc gctgcgttca
      781 atgccaggat gttggtctgg aacgcgatgc catcgatgac gccggtgata tcgccgatcc
      841 gcttcgacgc gccctcgatc gcctgcatgg tgtcgaccac ccgctgcatg gcggtgttgc
      901 cgtcactggc ggcattctgc gtggaggcgg ccagctcact ggcctggcgg gcatgggccg
      961 cgttctggcg aacggtggca gtcagttcct ccatggatgc tgcagtttcc tgcaggtgcg
     1021 cggcctggcg ctcactgcgt tcggacagcg cgccattgcc ggcggcgatc tcgctggcgg
     1081 cggtactgat cgagatggag cactgctgga tgcggccgac catgcgcgcc agttgcccgg
     1141 cggtggcgtt ggcatcacgc tggatcgcgg cgaaggcgcc ttggtattcg ccgtgcatgc
     1201 gccggtccag atcgccattg gccagcgcag aaagcatctg tcgcacttcg tcgacggtgc
     1261 tgcccagcgt atcgagcagt tggttgatgc caccggtgag cccctccagg aagctggcac
     1321 cttcgcccgc ttgcagacgc tggtcgagat cgcctgctgc ggccgcggca acaatgtcgg
     1381 cgactgcgtt ctcaagcgac agttcgtgcg tacggtcatg ccactccacg gcgaaaccga
     1441 ggcgcacgcc ctgtgcatcg aacaccggcg tgaccacctg ggcgaaatgc accgggccga
     1501 tctgcacctt gccgttgtgc gtgacctgca ggccattgag gatcgcgcgg atgcggtccg
     1561 gattggcgtg gaaacgatgg atgctgctac caacgaggcg ttcggcgtcg aagtcaggga
     1621 aggcctggcg cagcgtcgcc tgctggttgc gcagcagggc caccaccgaa cggttcacgt
     1681 agcggatcac gtggtcgttg tcggcaatca tcatcgcggt gcgcgaggcg tccagggcct
     1741 ggcggatctg cgcgttctcg gcatgcgctt cagcctcgcg cccgcgctgg gcctgcacgt
     1801 ggcgggcggt atcggccagc gcatgggcca gcgagcccgg tgcaaaggcc gcggtatccg
     1861 catgcgcgcc cagatcggca ccggtggcga tatcgcgggc caatgctgcg aggcggcgtg
     1921 ggccgtgacc gagcgcctcg gtctgctggc gcaggcgtaa cgcggcctgg ccgaggaaca
     1981 gggtcaggcc ggcaaacagc gttgcctgca gcagcgttgg cccggccgcg gcaccttcca
     2041 gcagcggctg cagcagcgcg agcgtgccaa cgccaccggc cagccatacc ggcaggcgat
     2101 cacggtggct gagcagcacg cccagcagta ccgcgatcgg caatgccggc gacaggccga
     2161 ccatcgcgca cagcaatgcc agttgcagcg acaacagcaa cgccaggcca ttgcgcgcga
     2221 ggctgtgacc cgcctgtggg ccggccagcc agatggccgg cagcacggcg gccgcagcca
     2281 acgcggcacc cggcacgtgg ggcccacgca gggccagagc caggccagcc acggccaatg
     2341 ccgcgctgcc gatcagcagt cggcgatcag cacggcgggc gagctgctgc agatgcggca
     2401 gtcgggcggt atcggggggg cgggaggatg cagcggacat cggcgactcc tggatcaaca
     2461 gacggcagcg gccacgccgc gacgcacgca tgagcgcgtg gcctgggcag ggaccgggaa
     2521 ttcggggaat gcgacgtcat caacgccgcg gagacagcgc gccgtgaccc catcctgtgg
     2581 gtgacggtgc agtagagcgg gcatgcggac ttccttgcag aaccagacac acgccgcagg
     2641 cccgaccggg cccgcgtgct gcggacgcag gggcccgcaa ctgatgtatc ggccgcaaac
     2701 gcgcggagtg aagcgcgcgg aggcgcggac tcagtcggcg ttgtcgttgc tgaagaagtg
     2761 caggatcacc tcggcaacct gtgccgggtc ttccatgtgc aggtgatggt tgccgggaaa
     2821 cactgccagc cgtccatcgc gcaggtgccg caggcgatcg ctgcgcatgg gctcggggta
     2881 ataggactgc gctggcgtgg cgtagatcac ctgcgtgggg caggcgatgg cctgcagcag
     2941 attgtcgatc tggccttcgc tgaggcggat cgcggtgggc agcatcagcc gtggatcgct
     3001 gcaccaccgg tagccgcctt cgaccggttc cacgccacgc tcaaccagca ggcgtgcgca
     3061 gccttcgctg agctggttgg tcatcatccg cgcacggatc ggcgcagcga ggtcggggaa
     3121 cacacgcaac tgcttgcgtg cgagcgcacg cgtggcattc acatgctcgc gcaggcgatg
     3181 cgcggtttct tcctccggcc cacgcaggcc gccgagtgct tcgatcgcca ccagccgttc
     3241 gatgcggtcg ctgaccgagg cggtgaggct ggcgatgccg gcgcccatcg aatggccgag
     3301 caggctgaaa cggtcccagc ccagtgcatc ggccacatca agcacatggc agatcgcggc
     3361 gggcgtggtg tagctggcgc cggccggcag atgcgcgctg tggccatggc cgggcagatc
     3421 gatggcgacc agctgcagcg aggacaggtg cggggccagc ggcacgaagc tggcggcgtt
     3481 gtcgagccag ccgtgcaggg ccagcacgcg cggaccctcg ccgtggttgc gcaggccggc
     3541 gacgcgtgcg ccaccgacct cgagttcaaa cggatgcagg ctcatgccag cgaggccacg
     3601 gccagccgcg ccagggcgcg tgcgtgctcc ggttcggcgt tgaggcaggg gatgtagcgc
     3661 atcgtcgcgc cgcgttcggc cagcgtttcg gtgaagccca ttgccacctc ctccagcgtc
     3721 tccaggcagt cggtggcgaa gccggggcag accacgtcga tctgtttcac cccggattcg
     3781 gccaacgccc acaggctggg ctcggcgtac ggctgcagcc agcgctcgcg gccgaagcgc
     3841 gattgatagc ccatctgcca ttcgtccctg cccaggccca gcgcgttggc aatggcctgc
     3901 gcgctggcct cgcaccgctg cggatacgga tcgccgccat cggccaggcg ttgcgggatg
     3961 ccgtggaagg agaacatcag cttctggcca cggccgtgct gttcccagta gcgctggatg
     4021 gaaccggcaa ccgcctcgac ccagcccggg tcgaccgaat agtcgcgcac caggctgacc
     4081 gtcacgccgg ggttgcggcg ctgccaggca tcgacgcggt cttcgaccga ggcggtggtg
     4141 gtggtcgagt actgcggata cagcggcagc accacgatgc gacgtgcgcc ttcggcggcc
     4201 aggcggtcga gctcggcggc cagcgccggt tcaccgtagc gcatcgcatg gcgaaccctg
     4261 agcgtcggca gcagtgcctg catggcttgc gccagttggc gcgtatgcac catcagcgga
     4321 gatccgtcgg gcagccagac ctgggcgtac ttggccgccg aacggctgct gcgcagcggc
     4381 aggatcagcc cgcgcagcag tggctgccac agcagtgccg gaatcgagac cacgcggggg
     4441 tcggacagga attcagccag gtaacggcgt acggcggggg ccgtcggcgt ctcgggcgtg
     4501 cctaggttga ccgccagcac ggcggtatcg ggtgcgtcga gcatgggatg tattgtcgcc
     4561 gatccggtgc cgcgccggca tgcagggttc ggatcgcggg catagcgggc atctatatga
     4621 gcaggcaacg ctcattggcg attcatggca acactactaa tttcagtcac ttgctatatc
     4681 ttcctatgga ctgacttctg gagcctgcca tgcgtcgccc gatccaagcc ctgctgatcg
     4741 ccgccagtct gctgtccagc caggccatgg ccggaccgca ggaagaccag cgcgcccgca
     4801 acgccgtgcg tgtgctggcc gaaatccagg gaatccctga acagggcatt ccggacaaat
     4861 tgctcgacga aggccgcgcg gtcatcgtca ttcccgacac gatcaaggcc ggcctggtca
     4921 tcggtggtcg tcgcggccat ggcctgatgt cggtgcgcat ggccaatggc gcctggtcca
     4981 acccggtgtt cgtcaagctc accggtggca gcatcggctt ccaggccggc gtgcagtcct
     5041 cggacgtggt gctggtgttc cgcaacgacc gcagcctgga caacctggtc aacggcaagt
     5101 tcacgctggg cgccgatgcc ggcgttgccg ccggcccggt cggtcgcaac gccgccgccg
     5161 ccaccgacgg ccagttgaag gccgagatct ggtcgtggtc gcgtgcccgt ggcctgttcg
     5221 ccggcgtcgc cctggacggt gcggtgctgc agatcgacga tgccgccaat ctggacgcct
     5281 acggcagcaa caccacgccg cgcatgatct tcgaaggtcg cgccggtggt tcgccgtcga
     5341 tggatgtggt cgccttccgc gatcgcctgg aagaggccac ctacgccgcg cgcaacaacc
     5401 gcaacggcaa cggcggcaat gcgccgcgtc cggcagcggc tccggcggtc gccccggcgc
     5461 ctgttcaggc agcgccggcc ccggcagagg ccaccactgc gccgctgcag aacgtgccgc
     5521 agaccccgcc gccgcagcag cagggcttcc agccggtcaa cgacggcgag atccgcacgg
     5581 aaacgctggg cggaaactga ctttcgtcac gcgcgccggc taacagccgg tgcgctatgc
     5641 tcgacagcct gatcactaac gtaacgagcg tctttatggg cagtttcagc atctggcatt
     5701 ggttggtcgt gctggccatc gtcctgctgg tgttcggcac caagcgcctg accagtggcg
     5761 ccaaggacct cggttcggcg gtcaaggaat tcaagaaggg catgcgcgac gaggacaagc
     5821 cgaacgcgca gctgggcgac gagtcgcgca gccaggacgc ctcgcgcacc gcgcaggacg
     5881 agcacgaccg taacgctcgc tgatccggag cggttgcggt gtttgatatc ggcttcagcg
     5941 aactgctggt gattgcggtg gtcgccctgg tggtgctcgg tcccgagcgc ctgcccaagg
     6001 cggcccgctt cgccggcctg tgggtgcgtc gtgcccgcaa tcagtgggat tcggtgaaac
     6061 aggagctgga gcgcgaactg caggccgagg agatcaagcg gcagatgcag gacgtgcgcc
     6121 agggcatgca ggacaccgag aaccagctgc gtgccagcgg cgaagcgatc cgtcgcgaag
     6181 cccagcaggc gcagcagcag ggcgacgatc tggcgcagga agtccgcgcg ccggcaccgg
     6241 ccgacctgcc gccgcacctg ggccagccgg ttgccgcgga ccaggcaccg gcacaggacg
     6301 tcgctgcggt agcgcccagc gccgccacgg ccactgaaac cactgcgacg ccgccggcgc
     6361 agaacacgga gcgcccctca tgagtgagca ggatttcggc gaaagctcgc tggttgaaca
     6421 tctggtggaa ctgcgcggcc gcctggtgcg cgcattgctg ggcctgggcg tggcgctgct
     6481 ggcgttgctg ccattcaccc agaagctgta caacgcgctg gccgagccgc tggtctcgca
     6541 gctgcccaac gggcagacga tgattgcgac caacccggcc ggtgccttct tcgcgccgtt
     6601 gaagctgacc ttcttcgtcg ccctgttcgt ggcggtgccg tggctgctgt accagctgtg
     6661 ggcgttcgtt gcgccgggcc tgtacgcgcg cgaaaagcgc ctggcggtac cgctgctggt
     6721 gtcgtcggtg gtgctgttct acaccggctg tgccttcgcc tacttcctgg tgctgccggc
     6781 ggtgttccac ttcctcacca ccttcagccc ggacgtgatt gcgatcaccc cggatgcgaa
     6841 cgcctacctg gacttcgtgc tggcgatctt cttcgctttc ggcggcagtt tcgaactgcc
     6901 ggtggcgatg gtgatcctgg tgctgctggg ctgggtgacg ccgcagcagt tcaaggaagg
     6961 ccgcggttac gcgatcgtcg gcatcttcgt ggtggccgcc gtgctgaccc cgccggacgt
     7021 agtgtcgcag ctgatgctgg ccatcccgat gtgcctgctc tacgagctgg gcatccacgc
     7081 cgcacgctgg ctggtgccgt cgtcggtagt gaagaaaccc gccgcctgaa agaaaaaagg
     7141 ggacggaggg gattaagtcg tttgtgcctt taacgactta atcccctccg tccccttttt
     7201 ccgtcaggcg tggaagatgt cgctggaggt cggggtggtc gggatcggcg gtgcggcgcg
     7261 gctgccgcgg tgcacgaaca tctgcttcca cgcggcatag accgcgccga cgtacagcgg
     7321 catcagtacc gtagtcagta ccagctgggc gatgaaggcc gcggccagcg ggccgccgat
     7381 cagcatcgcg atctggatca cgatcacgaa caggatgtac atgcagaacg cggcgatcag
     7441 gccgagcacg gcgaacacga tcatcgcgcc gatgttctcg atgcagccct gcaggctcag
     7501 gcgcagcgcg tgcatgccgc tctgcttgtc gaacaccacc agcgccggct gggtgaacat
     7561 cgccagtgac agcgcgaccg cactcaggaa caccagcagc atccacagcg cgatgcgctt
     7621 ggccggcagg ttggcgacca gcgcggcggc atcgtccggc ttgatctgct gaccgctgcg
     7681 gctgatctct tccatcttgg tcatgacctc gctgaaggcg gtgaagcctt cgcggccgat
     7741 catcatgaac agcagcgcgc ccagcagcag caccgccagc acctggatcg ccagcggcac
     7801 cagcaggtgg ctgacgcggt ggtcgcggat cggctgcagc aggtgcgagg ccaggcccgg
     7861 gcggccttcg tcgatctcgc cgacggcata cagcatgccg ccgaacatga tcggcgaaat
     7921 ggccagggtc atcagctgca cggccatgcc ggcagcgccg ggaatcagcg tcgacagcag
     7981 ggtcaccacc cagctcacca gcagccaggt caggccgatc cgggccagct gcagcggcgc
     8041 acgccggtac agggagaacg tatccagcaa ccactgggcg cccgccgaag ccggcagctt
     8101 gcgaatctct ttcatggaca tccgggaagg gacaggaggg gccgggcggc tgcccgtggc
     8161 gccgattatc cctgttttgc cgccggctgg gctgaagaca gccgcgcctg gcggacgaag
     8221 cggcgcaaca gctggcgggc cagcggtgcg gcgctgaccg cgcgctcgat gctgcgggca
     8281 cagccgccgt ggcggccgat gcagtcggcg cgggcacgca cgtagccacg catgtggtgg
     8341 gtggcgaatt ccggatggaa ctgcacgccc catgcctggc gcccccagcg gaaggcgtgg
     8401 cagccatcca gcggcgaacg cgccagcact tcggcaccgt ccggtgcgcg cagcacggtc
     8461 tgcaggtggg tggcgtgggc ggcgaaatgc tgtggcaacc cctggaacag cgggtcctgc
     8521 gcggcctgtg gctgcagttc cagctcgatc gtgccggact cgcggcccgc tgggttgtag
     8581 gccacctcgc ccccgagcgc gtgcgccagc agctgatggc cgtagcagat gccgaacacc
     8641 ggcaggtcgt cgtgggcggt ccggcgcagc caggcggcgc tgcgctcgct ccattcggca
     8701 tggtcggtga cgaacgcggc cgagccggtc accagcacgc cggcgaagcc gtgcggatcg
     8761 ggcagggcgc caccgtgttc gacatcgacc accaccgtct cgtgttcttc cagcccggcg
     8821 gcgacgcgga tccagtgcgg gaagcgcccg tagcggcgca gtgacggcac cgggcggccg
     8881 gtttcaagga tcaggaacgg agctgggttc atccgggggc ggcagcactg acaggacttc
     8941 ctcgattgta gtcagcccct gcgccacctt ttcaagcccg gcctggcgca gggttcgcag
     9001 cccttcagcc cgcgcggcgc gggtgaaacc ggccaggtcc atgtcggcgc ggatctgccc
     9061 gcgcagccgc gagcccaatg gcagcagctc atacaggccg atgcggccga ggaatccggt
     9121 gcgccggcac tccaggcaac cgaccggccg acagggcgtg gcggcatctg gatatgcagc
     9181 atggctatca gccagcaccg cccagtcggc ggcgccaagg ctgtgcggct gcttgcagtg
     9241 cgggcacagg gtgcgcacca ggcgttgggc gaggatgcca ttgagggtgc tggccagcag
     9301 gtaatgcggc acgcccaggt cgagcaggcg ggtgactgcc gagggcgcat cgttggtgtg
     9361 cagggtggac agcaccaggt ggccggtcag cgaggcctgc accgccatct gcgcggtttc
     9421 caggtcgcgg atctcgccga tcatgatgat gtccgggtcc tgtcgcagca gggtgcgcac
     9481 gccactggcg aagtccaggt cgatgttggt ctgcacctgc atctggttga actcgggcgc
     9541 gatcatctcg atcgggtctt ccaccgtgca cacgttcacg tccggtgtgg ccagccgctt
     9601 cagcgtggaa tacagggtgg tggtcttgcc cgagccggtc gggccggtga ccagcacgat
     9661 gccgtgcggg cgctcgacca gtgcattcca gccggcggcc tcctgcgggc tgaaaccgag
     9721 ctggtcgatg ctcttgaacg cggcatccgg gtcgaagatg cgcatcacgc acttctcgcc
     9781 gaaggcggtg ggcatggtcg acaggcgcat ctcgacctcg cggccacccg gcgagcgggt
     9841 cttgatgcgg ccgtcctgcg ggcgccggcg ctcggccagg tccatgcggc cgagcacctt
     9901 gatgcggctg accacggcgg tcatcaccgc cggcggcacc tcgaacacct tgtgcagcac
     9961 gccgtcgatg cggaagcgca tgcgtcccat ctcgcggcgc ggctccaggt ggatgtccga
    10021 ggcgcgctgc tcataggcgt actgcagcag ccagtcgacg atgtgcacga tgtgctggtc
    10081 gtcggcgttg acgtcgccgg cacggcccag ctcgaccagc tgttcgaagc tgggcagggt
    10141 ggtgctggcc tcaccgcgca catcgccgcg ggcgccacgc accgaacggg tcaccccgta
    10201 gaactccatg gtgtagcggt gcaggtccag cggattgacc accgccagct cgatgcggcg
    10261 ccgggtcagg tgctgcaggt cgcggcgcca ttcctgcacc agcggctcgc tggtggccac
    10321 cagcacgcgc tcggcatcca ccgccagcgg caggaagcgg tggcggcggg cataggcatg
    10381 cgacaccagg gccgtgaccg cggcgacgtc gacccgggtc gggtcgatgc gcaggtagcg
    10441 gcagccggta cgctgcgcca gccattcact gaggcgttcc agggtcagtt cgccgccgcc
    10501 gttggcggcc agcttgaggt tggacagcag caccagcgga tgcacttcgc tggcgttgcg
    10561 cgcaccctgt gcggagaacc gcatgcgctc gcggtcctgc tcggccacca ggccatcggc
    10621 gatcagggcc gcggcgatct gctcgaaatg caggcggccc cagggcagcg gaacgccgcc
    10681 cgcctcgccg ggcgtgccca ccggcagccg atgttccatc tgcctgctcc tcccgggtac
    10741 ggaatgcccc gcaggtcggc cgttatacta gcgcaccccc cttgccggcc aagaatcgtc
    10801 cgcatgtccg cgaccccgac cgttccgatc accttccagg gcctgatcca gaccctgaac
    10861 cagttctggg cccagcaggg ctgcgtgctc atccagccgc tcgacctgga ggtgggcgcc
    10921 ggtaccttcc acccggccac cttcctgcgt gcgatcggtc cggaaggctg gaacgcggcc
    10981 tacgtgcagc cctcgcgccg cccgaccgac ggccgctacg gcgagaaccc gaaccgcctg
    11041 cagcgctact accagtacca ggtggcgatg aagccggcac cggacaacat ccagcagctg
    11101 tacctggatt cgctgaaggc gctgggcatc gatccgctgg tgcacgacct gcgcttcgtc
    11161 gaggacaact gggaatcgcc gacgctgggt gcctggggcc tgggctggga agtctggctc
    11221 aacggcatgg aagtgaccca gttcacctac ttccagcagg ccggtggcct ggaatgccgc
    11281 ccggtgctgg gcgagatcac ctatggtctc gagcgcctgt gcatgtacct gcagaactgc
    11341 gacaacgtct acgacctggt ctggacctac ggcccggacg gccagccggt gacctacggt
    11401 gacgtctacc accagaacga ggtggagcag agcacctaca acttcgaata tgccgacgtg
    11461 gacgaactgt tccaccgctt cgatgcctgc gagcgcgaag cgcagaagct ggtggaagtg
    11521 aacctgccgc tgccggccta cgagcaggtg atgaaggcca gccacacctt caacctgctc
    11581 gatgcgcgcc gcgcgatcag cgtgaccgag cgccagcgct acatcctgcg cgtgcgcgcg
    11641 ctggcccagg cggtggccaa ggcctactac gagcagcgcg agaagctggg cttcccgggc
    11701 gccaagaagg cctgacggcc ctcccgcacc gacccgcttt tcatcaacta cccggggcgc
    11761 cggacgcgtc gcgcgctgcg cccccaccac aggattgaaa cgatgagcca actgtccccc
    11821 ctgctgatcg aactgggcac cgaggagctg ccggtcaagg cgctgccggg cctggcccaa
    11881 gcgttcttcg atggcgttgt cgacggcctg cgcaagcgcg gcgtcgcact ggaactgggc
    11941 gacgcccgcc cgttgtcgac cccgcgccgg ttggccgtgc tgctgccggg cgttggcctg
    12001 gaacagccgg aacagcacag cgaagtgctg ggcccgtacc tgaacatcgc gctggacgcc
    12061 gaaggccagc cgaccaaggc cctgcaggga ttcgccgcca aggccgggat cgactggacc
    12121 gcgctggaga agaccaccga caacaagggt gagcgcttcg tgcaccgcgc ggtgacgccg
    12181 ggcgcgagca ccgccagcct gctgccggag atcctgcgcg aggcgatcgc ggcgatgccg
    12241 attcccaagc cgatgcgctg gggcgaccac gcctggggct ttgcgcgccc ggcgcactgg
    12301 ctggtgctgc tgcacggtgg caacgtggtg gaggccgaac tgttcggcct gcaggccggc
    12361 cgtgtcagcc gtggccatcg tttccaccac gaccaggccg tgtcgctggc acagccgcag
    12421 gattacgtgg aagccctgcg cgccgcgttc gtgctggtcg acccgagcga gcgccgcgcg
    12481 cgcatcgtcg ccgaggtcga agccgctgcg gccaaggccg gcggcagcgc ccgcatcacc
    12541 gaggacaacc tggagcaggt ggtgaacctg gtcgagtggc cgtcggcggt gctgtgcagc
    12601 ttcgagccgg cgttcctggc ggtgccgcag gaagcgctga tcgagacgat ggagatcaac
    12661 cagaagttct tcccggtgct ggatgacagc ggcacgctga ccgagaagtt catcggcatc
    12721 gccaacatcg aatcgaagga cgtggccgaa gtggccaggg gctacgagcg cgtgatccgc
    12781 ccgcgcttcg ccgatgccaa gttcttcttc gacgaagacc tgaagcaggg cctggcgtcg
    12841 atgggcgagg gcctgaagac ggtgacctac caggccaagc tgggcagcgt ggccgacaag
    12901 gtcgcccgcg tggccgccct ggccgaggtg atcgcgccgc aggttggcgc cgacgctgcg
    12961 caggcacggc gcgccgccga actggcgaag aacgacctgc aatcgcgcat ggtcaacgaa
    13021 ttcccggaac tgcagggcat cgccggccgc cactacgccg tggccggtgg cgaatcggcc
    13081 gaggtcgcgc tggccatcga cgaggcctac cagccgcgct tcggtggcga tgacatcgcg
    13141 ctgtcggcgc tgggcaaggt gctggcgatt gctgaacgcg tggacacgct ggccggtggt
    13201 ttcgccgcag gcctgaagcc gaccggcaac aaggacccgt tcgccctgcg ccgcaacgcg
    13261 ctgggcctgg cccgcacgat catcgaaagc ggcttcgagc tggacctgcg cgcgctgctg
    13321 gccagcgcca atgccggcct ggccgcgcgc aatgtgcagg ccgacgtcgg cgagctgtac
    13381 gacttcatcc tcgaccgcct gaagggctac tacgccgaca agggcgtgcc ggctacgcac
    13441 ttcaatgcgg tggccgagct gaagccggcc tcgctgtacg acttcgaccg ccgcctggat
    13501 gcgatcggca ccttcgctgc gctgccggaa gccgaggcac tggccgcggc caacaagcgc
    13561 atccgcaaca tcctgcgcaa ggccgagggc gacattccgg cccagatcga ccctgcgctg
    13621 ctgcaggaag acgccgagcg cgcgctggct gaagccgtca ccgcggccat cgacgacacc
    13681 ggcgccagcc tgcagtacaa ggactacgtg gccgtgctgg cccgcctggc ccggctgcgc
    13741 ccgcaggtcg atgccttctt cgatggcgtg atggtcaatg ccgaggatcc ggcgctgcgt
    13801 ggcaaccgcc tggcgctgct gacgatgctg ggtgagcgcc tgggcaaggt cgcggcgatc
    13861 gagcatctgt cgagctgatg ccc
//
LOCUS       DAOKIP010000101        13804 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.101,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000101 DAOKIP010000000
VERSION     DAOKIP010000101.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 13804)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13804)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13804
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.101"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(59..607)
                     /locus_tag="QEL58_002426"
     CDS             complement(59..607)
                     /locus_tag="QEL58_002426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA starvation/stationary phase protection
                     protein"
                     /protein_id="HDS1676886.1"
                     /translation="MAKTKSTTKAKTGKQKLAAAAPSAPNIDIGITQGDRKKIADGLS
                     RFQADAFTLYLKTHNFHWNVTGSMFNSLHTMFETQYTEQWAALDDVAERIRALGFNAP
                     GSYREFAALTSIAEEPGLTDSADWREMVRQLVVANEAVCRTAREVLDVAAKGDDAPTE
                     DLMTQRLQTHEKYAWMLRSLLQ"
     gene            694..4770
                     /gene="hrpA"
                     /locus_tag="QEL58_002427"
     CDS             694..4770
                     /gene="hrpA"
                     /locus_tag="QEL58_002427"
                     /EC_number="3.6.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RNA helicase HrpA"
                     /protein_id="HDS1676887.1"
                     /translation="MNSIDKNPSPRLRQQRAAIDGAMSRDRGRLLGMLSRCQAKPQDA
                     ALAATFEQALQASVQRRQMRAQQQPSITLDPQLPIAREADAIIELIRDHQVVVIAGET
                     GSGKTTQLPKLCLAAGRGQAGMIGCTQPRRIAARAVASRVAQELQSELGQLVGFQVRF
                     NDKVSDDSRIKFMTDGILLAEIASDRWLSNYDTIIVDEAHERSLNIDFLLGYLKQLLR
                     KRPDLKLIVTSATIDTERFAQHFDNAPVISVEGRTFPVEVRYRALEGEGEDQGERTVN
                     DAIVSAIDEITRLDARGDVLIFLPGEREIRDAHQSLERRKYRNTEVLPLYARLSNQDQ
                     DRVFNPGPNRRIVLATNVAETSLTVPRIRYVVDPGFARVKRYSPRNKLDRLHIEPISQ
                     ASANQRKGRCGRIAEGICYRLYAEADFQARPEFTDPEIRRSSLAGVILRMLQLGLGRI
                     EDFPFLEAPDERAVADGWQQLTELGAIDAERRMTTVGKQMARLPVDVKLARMLVAAQA
                     AGCLRPMLVIASFLGIQDPRERPPEARGAADSAHAQFADGRSEFVGVLRLWDAYRQAH
                     EDLTQSKLRDWCGRHFLGFLRMREWRELHRQLRLLCEELGWKEEAAEASMAPLLAGSS
                     APARDDAAAVKATRGQLHRAARLAREGKAEAAPAPVAVRAQKEQAPAGGGFSERVRAT
                     AYQTLHRALVAGLPTQIGHRTEKGDFQAPRQRRFLPFPGSALSKRPPPWLLAANLLDT
                     QKVWGMTLAAIEPDWVIAELPHLLLRKHFDPHWSRAQGQVLASEQISLFGLVLAPKKP
                     VHYGRIEPGEAHDIFVRQALVTGEINTRASFVADNQKVLEVAREEEAKLRRAGIVADE
                     DWQARWYLDRVPPQIHSAAGLDTWWKGLAPEQRKTLHWSLVDLLPGEGSEQERYPKYL
                     ALGQARLPLHYRFEPGADDDGVTLDVPLHLLNALDPVQLGWLAPGFVVDKASALIRSL
                     PKAMRRNYVPAPDFGRAFFEAFPQPSADAITGELARFLSRATGATVTALDFEPGAIEP
                     HLHMNLRLRDEHGKVLATSRDLDALRAKFGGRAGDAFAARAGREMAADGLRTFPATPI
                     PLQVPGEAGVPAYPALLDEGDSVALRIFADRQQAQEAHPLGVRRLLEIALAEKVKQAR
                     KQLPVGAKTGLLYAAIESQERLRGDLVDAAMNAVLAEGLEDIRDAAAFEQRRDHAAKA
                     LFGEAMSRLKLAETILALVAELKPMLEAPLMGWARGNLDDMEAQLAGLIHPGFLRDTP
                     ADALAQYPRYLKAMILRTERAKRDPPRDQARMLELHPFLDALRDAEAQGLRERPQWQA
                     LRWDLEELRVSLFAQELGARTGISAKKLAQRVTALRQA"
     gene            complement(4824..5360)
                     /locus_tag="QEL58_002428"
     CDS             complement(4824..5360)
                     /locus_tag="QEL58_002428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676888.1"
                     /translation="MPSIVPHFRPRVLACAALLLAVSAPALAQRVVEGDLQQQMSPAE
                     FKAAGLDKLDAAELATLNRWLQGKVEAATTQAVAAVREEAREEGRQEVIVKNRGFFDF
                     GSNEPITGVLQGEFRGFGKGRIYVLDNGQEWEQTDATTLAGVRKSSPQVSIKPGVMGV
                     WYMKVDGVNTQPKVRRTK"
     gene            5491..7647
                     /locus_tag="QEL58_002429"
     CDS             5491..7647
                     /locus_tag="QEL58_002429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019336379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional (p)ppGpp
                     synthetase/guanosine-3',5'-bis(diphosphate)
                     3'-pyrophosphohydrolase"
                     /protein_id="HDS1676889.1"
                     /translation="MNRASVPGLDALLNRPSAAVLPAPLRQALRGHWDAPECDHQMRA
                     SWSVLGDTLDALSMLSADEGAVVAALLFDLPGLRAHLDALPLGNHKAAVIGLLDGQDA
                     ADPVWALHAGREAGRNSEGLRRLLLAIIRDLRVVPILLARQLARMRAADKLDDEQRRA
                     LAQLTRDIHAPLANRLGIWQLKWELEDLAFRHLEPETYRRIAREVDETRIARERYVEN
                     VKKVLSRELVAQGIKAEVSGRPKHIYSIWRKMQKKRLAFDQLYDIRAVRVMVDDVAAC
                     YAALGVVHALWAPVPSEFDDYIARPKANDYRSLHTAVVGPEGRTIEVQIRTHEMHSQA
                     ELGVAAHWKYKEGGKGAEKAFDRKITWMRQLLEQAQDGQGNELAGALDAELTEDRVYA
                     LSPKDEVLDLPQGATPLDFAYQVHTMVGHRCRGAKVNGRIVPLTYRLRSGDRVEILTG
                     KEADPRRDWLMPANGFLASNRSREKVRSWFHKLDRARNVQAGRELLERELKRLGLQHS
                     DLAVAAKKFHADSVDDLYIQVALGDTGPNQVSRALLEAERAASQPAAAPALPRPTARR
                     ENLGKSKFTVQGVGNLLVQLARCCQPVAGEPIVGYLTRSRGVTVHRADCAALARLAAT
                     SPQRILPVEWGQAGGGYEVDVVVTAVDRRWLLKDITNLIAQEDAYVLDIHSDNVRNSG
                     RAHLRLRLKVSDYGQLSTLLGKLDALPGVSEARRLG"
     gene            7678..9249
                     /locus_tag="QEL58_002430"
     CDS             7678..9249
                     /locus_tag="QEL58_002430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012481053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676890.1"
                     /translation="MEREPPHRPHGAEHPALDRVRREGRWWWLQARHARRVWRWALVA
                     ALAVFVLLVLLRKPLADWFWDEPQIEQLLAEGDRALAAGRLSAADGSGARERYQAVLA
                     LDGDRPQAREGLARTAAAALQQARDRLQNNDLDGSAQALALARELQVPQSEAEAVARQ
                     LQARRNAGAGIGALLAQARNAFAAGRLDDGDSSALPLFQRILAVQPDNLPALEGREDA
                     LSDLLQQARTLAGRGELAEAAVIVQRARQFDAGHADLPASQEALARAVDLRLRQAQRA
                     LQRQQLENAAKGFLAVLAVAPEDPTAQRGREQVLQAVLARSQSQADDFQFDAAQRDAA
                     LAEALGASAAARQQLAQRLQRAQQAQRSLQQPAASNAQRERQLRELLRRIERAERAGQ
                     WISPPGHSAFDALREAQALAPRDSRVKAAAARLLPASRACFDDNLRQNRVQAAGACLQ
                     AWQTLSPTANGLPAARQRLAQRWLAIGSERLGNGDVAFAERALQQAAELGAGASSSEY
                     QQLRQRLRDIGVPSP"
     gene            9313..10203
                     /locus_tag="QEL58_002431"
     CDS             9313..10203
                     /locus_tag="QEL58_002431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005414259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676891.1"
                     /translation="MTVLVSGATSQIGRFLLPRLLQVHGQVQAVSRRPQPAQDGVHWL
                     CGDLASALDSVPSAEWQAIASFGPLEGLAQWLSRQARAPAPRVIATSSMSVLSKQDSD
                     QADEQDVVAMLQRGEQGLIEQAERLGMAWTILRPTLIYGAGIDRSITPIVQRALRLRL
                     FPIPRAEGLRQPVHADDIARAVVACITTGAASARVLEIGGGERLPYHAMFRRVHASLA
                     QPTLPLPLPGFALRGLAAVLPRARGPVSRLQQDLVADNGPLLALLGVHPRPFRPEADM
                     WQPMSAAQALQRIAAHPGNH"
     gene            10273..11325
                     /locus_tag="QEL58_002432"
     CDS             10273..11325
                     /locus_tag="QEL58_002432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005414258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HDS1676892.1"
                     /translation="MPDAPSGSAPAERIGVALCTYNGARYLQAQLDSILDQDLPVSEV
                     VIGDDGSSDQTLPLLKAFEVRARALGIRVEIVRHPRNLGYVRNFADALQRCQADILFL
                     SDQDDVWHPGRVRRYVQRFRADPGLLLVHSDARLVDAQGAPLGQRLLEVLVVHPAEVE
                     LERSGRAIDAILLRNFVTGATCALRRSLLEGALPVPPGWSHDEWLAVHASLRGGLDML
                     AEPTIDYRQHGNNQIGASRRGFLQRLRHLDLFDGKARQRTAGRLLALDALLVQRGVRV
                     APERFQGLSALAWRMAWSRLQLYRRAGVQARWIAHDAPRLFARLANVYLAGAGWRGVR
                     AALAGAAAGWREPRAA"
     gene            11411..>13804
                     /gene="mrcB"
                     /locus_tag="QEL58_002433"
     CDS             11411..>13804
                     /gene="mrcB"
                     /locus_tag="QEL58_002433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012511881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 1B"
                     /protein_id="HDS1676893.1"
                     /translation="MPRRYDSDDNDDFDDDQQDDSPLWRRRLITWSMAAVALGLGFLI
                     PYTLYLNQQVTQRFGELRWQIPTRVYARPLVLTPGKAMDAATLKTELAASAYRDDGQG
                     KEPATYAVNGGRFVISSRGYNDVDGRVAPRRVELSLADGGVASLRDADNRKALKAARL
                     DPARIATLYGQKQEERRLIRMDEAPDLLVTGLQAVEDKDFNRHHGIDLSGIARAVWVT
                     IRSGGQSRQGASTLTQQLARSGLLGIGKEQTVTRKFNEVLYALIMEARYDKRTIFEAY
                     LNQVYLGQRGSQAIHGMSSGAEFWFGRDLSSLETEQIALLIGLVKGPSFYDPRRNPER
                     ALDRRNFVLGKLHEATLIDDAEYQRALKAPLGVPKTPGLVAANRFPAYVDLVRRQLGH
                     DYPESALQGAGLSVMTGMSPSAQAYAEGAVTRTIKSLESKRRPELQAGMVLTDVHNGD
                     VLAVIGSREVSEVGFNRAIEAQRPVGSLLKPFVYLLALAQPDRYSLASWVDDSPVTVQ
                     LGRGRNWNPGNADNRSHGTVRLIDALAHSYNQATVRVGMQVGPERVTQLIHVLAGIKA
                     EANPAVILGSTDQSPYAMAQLYQFLASGGEIQPLHAVRGVLDPQGKLLKRYDKTPAPA
                     QEGDSIAANLISVGLQQVVASGTAQRLNADGLGRLQPAGKTGTTNDGRDSWYAGYTGD
                     HLAVIWIGNDQNEQAGLYGATGAMRVWSGIFQRLPSAPLRVSNKGLDWQSVAPTGINS
                     TDEGCPGARRFPFVVGYAPAYAPCAPAVSPDGQGGTEGEGGGWRSWFGLDRKPDAPAE
                     "
BASE COUNT         2156 a         4646 c         4871 g         2131 t
ORIGIN      
        1 gccagcggcc ggcactaccg cgggtgcagg gcgcagccct gccgagcccc ccaaaccctt
       61 actggagcag ggaacgcagc atccaggcgt acttctcgtg ggtctgcagg cgctgggtca
      121 tcagatcctc ggtcggagca tcgtcaccct tggccgccac gtccagcact tcacgagccg
      181 tacggcagac cgcttcgttg gcgaccacca actggcgtac catttcacgc cagtccgcac
      241 tgtcggtcag gcccggttcc tcggcgatcg aggtcagcgc agcaaattcc cggtaggagc
      301 ccggggcatt gaagcccagc gcgcggatgc gctcggccac gtcgtccagt gctgcccact
      361 gctcggtgta ctgcgtctcg aacatggtgt gcagcgagtt gaacatcgac ccggtcacgt
      421 tccagtggaa gttgtgcgtc ttcaggtaga gcgtgaacgc atcggcctgg aagcgcgaca
      481 gaccgtcggc gatcttcttg cggtcgccct gggtgatccc gatatcgatg ttcggtgccg
      541 acggtgccgc cgctgcaagc ttctgcttgc cggtcttggc cttggtcgtg ctcttggtct
      601 tcgccatggg gttcctcctt gtggaatcgt tggccttcac aataaaccgg tcgtgatgac
      661 tggtcgcttt caaagttttg aacgaaccga ttgatgaact ctatcgataa aaatccatcg
      721 ccccgcctgc gccaacagcg tgccgccatc gacggcgcca tgagccgcga ccggggccgt
      781 ctgctgggaa tgctctcgcg ttgccaggcc aagccacagg atgcggcgtt ggccgccacc
      841 ttcgagcagg ccttgcaggc atcggtgcag cgccggcaga tgcgggcgca acagcagcca
      901 tccattactc tggacccgca gctgccgatt gcgcgtgaag ccgacgcgat catcgagctg
      961 atccgcgacc accaggtggt ggtgattgcc ggcgaaaccg gttcgggcaa gaccacccag
     1021 ctgccgaaac tgtgcctggc cgcgggccgt ggccaggctg gcatgatcgg ctgcacccag
     1081 ccgcgacgga ttgccgcacg tgcggtggcc agccgcgtgg cgcaggaact gcagagcgaa
     1141 ctgggccagc tggtcggctt ccaggtgcgc ttcaacgaca aggtcagcga cgacagccgc
     1201 atcaagttca tgaccgacgg catcctgctg gcggagatcg ccagtgaccg ctggttgtcg
     1261 aactacgaca cgatcatcgt tgacgaagcg cacgaacgca gcctcaacat cgacttcctg
     1321 ctgggctacc tgaagcaact gctgcgcaag cgcccggacc tgaagctgat cgtcacctcg
     1381 gctaccatcg ataccgagcg cttcgcccag catttcgaca atgcgccggt gatcagcgtc
     1441 gagggccgca ccttcccggt ggaagtgcgt taccgtgcgt tggaaggcga gggcgaagac
     1501 cagggcgaac gcactgtcaa cgatgccatc gtgtcggcca tcgacgagat cacccgcctg
     1561 gatgcgcgcg gcgacgtgct gatcttcctg cctggcgaac gtgagatccg cgacgcgcac
     1621 cagtcgctgg agcgccgcaa gtaccgaaat accgaagtgc tgccgctgta cgcgcggctg
     1681 tccaaccagg accaggaccg ggtgttcaac cccggcccga accggcgcat cgtgctggcc
     1741 accaatgtgg ccgaaacctc gctgacggtg ccgcgcatcc gctacgtggt cgaccccggt
     1801 ttcgcccgcg tcaaacgcta cagcccgcgc aacaagctgg atcgcctgca tatcgagccg
     1861 atctcgcagg caagcgccaa ccagcgcaag ggccgttgcg gtcgtatcgc cgagggcatc
     1921 tgctatcgcc tatacgccga agctgatttc caggcgcggc cggagttcac cgatccggaa
     1981 atccgccgct ccagcctggc cggggtgatc ctgcgcatgc tgcagctggg cctgggccgc
     2041 atcgaggact tcccgttcct ggaagcaccc gatgagcgtg cggtggccga tggctggcag
     2101 cagctgaccg agctgggcgc gatcgatgcc gagcggcgca tgaccaccgt cggcaagcag
     2161 atggcacgcc tgccggtgga cgtgaagctg gcgcgcatgc tggtggccgc gcaggccgcc
     2221 ggttgcctgc ggccgatgct ggtgatcgcc tcgttcctgg gcatccagga cccgcgcgag
     2281 cgcccgcccg aagcgcgcgg tgcggccgac agcgcgcatg cgcagtttgc cgatggccgc
     2341 tccgaattcg tcggcgtgct gcgcctgtgg gatgcctatc ggcaggccca tgaagacctg
     2401 acccaatcca agctgcgcga ctggtgcggc cgtcatttcc tcggtttcct gcgcatgcgc
     2461 gagtggcgcg agctgcatcg ccagctgcgc ctgctgtgcg aggaactggg ctggaaggaa
     2521 gaggctgccg aggcgtcgat ggcgccgctg ctggccggca gtagtgcgcc ggcgcgtgat
     2581 gacgcggcag cggtgaaggc cacccgtggc cagctgcacc gtgccgcgcg gctggcccgc
     2641 gagggcaagg ccgaagccgc gccggcaccc gtggccgtgc gcgcgcagaa ggaacaggcg
     2701 ccggcgggcg gcggtttcag cgaacgcgtg cgtgccaccg cctaccagac cctgcaccgg
     2761 gcgctggtgg cgggcctgcc gacgcagatc ggccaccgca ccgagaaggg cgatttccag
     2821 gccccgcgcc agcgccgctt cctgccgttc ccgggctcgg cgctgtcgaa gcggccgccg
     2881 ccttggctgc tggcggccaa cctgctggac acgcagaagg tgtggggcat gaccctggcc
     2941 gcaatcgagc cggactgggt gatcgccgaa ctgccgcacc tgctgctgcg caagcacttc
     3001 gatccgcact ggtcgcgcgc gcagggccag gtgctggcgt ccgagcagat cagcctgttc
     3061 ggcctggtgc tggcgccgaa gaagccggtg cactatggcc gcatcgaacc gggcgaagcg
     3121 cacgacatct tcgtgcggca ggcgctggtg accggcgaaa tcaacacccg tgccagcttc
     3181 gtggccgaca accagaaggt gctggaggtc gcgcgcgagg aagaggccaa gctgcgccgc
     3241 gccggcatcg ttgccgacga ggactggcag gcgcgctggt acctggaccg ggtgccgccg
     3301 cagatccact cggcggcggg tctggatacc tggtggaagg ggctggcgcc ggagcagcgc
     3361 aagacgctgc actggtcgct ggtcgacctg ctgcccggcg aaggcagtga acaggagcgc
     3421 tacccgaagt acctggcgct gggccaggcg cggttgccgc tgcattaccg cttcgaaccg
     3481 ggcgccgacg atgacggcgt gaccctggac gtaccgctgc acctgctcaa cgcgctggat
     3541 ccggtgcagc tgggctggct ggcgccgggc ttcgtggtgg acaaggcctc ggcgctgatc
     3601 cgcagcctgc ccaaggcgat gcgccgcaac tatgtgccgg cgccggactt cggccgcgcg
     3661 ttcttcgagg cgttcccgca gcccagcgcc gatgccatca ccggtgagct ggcacgcttc
     3721 ctgtcacgcg cgaccggtgc cacggtgacc gcgctcgatt tcgagcccgg tgcgatcgaa
     3781 ccgcacctgc acatgaacct gcgcctgcgc gacgagcacg gcaaggtgct ggccacgtcg
     3841 cgtgacctcg atgcgctgcg cgcgaaattc ggtggtcgtg ccggcgatgc cttcgcggcg
     3901 cgcgccgggc gcgagatggc ggccgatggc ctgcgcacgt tcccggccac gccgattccg
     3961 ctgcaggttc ccggcgaagc gggtgtgccg gcctatccgg cattgctcga cgaaggtgac
     4021 agcgtggcgc tgcgcatctt tgccgatcgg cagcaggcgc aggaagccca tccgctgggc
     4081 gtgcgccgcc tgctggagat cgccctggcc gagaaggtca agcaggcacg caagcagctg
     4141 ccggtggggg ccaagaccgg cctgctgtac gcggccatcg aatcgcagga gcgcctgcgc
     4201 ggcgatctgg tcgatgcggc gatgaatgcc gttctggccg aaggcctgga ggacatccgc
     4261 gatgcggcgg ccttcgagca gcgtcgcgac cacgcggcca aggcgctgtt cggcgaggcg
     4321 atgtcgcggc tgaagttggc cgagaccatc ctggcgctgg tggccgagct gaagccgatg
     4381 ctggaggcgc cattgatggg ctgggcgcgc ggcaacctgg atgacatgga agcgcagctg
     4441 gccgggctga tccaccccgg cttcctgcgt gatacgcctg ccgacgcgct ggcgcagtat
     4501 ccgcgctacc tgaaggcgat gatcctgcgc accgagcggg ccaaacgcga tccgccgcgc
     4561 gaccaggcac gcatgctgga actgcatccg ttcctggacg cgctgcgcga tgctgaggca
     4621 cagggcctgc gtgaacgccc gcaatggcag gcactgcgct gggacctgga ggaactgcgg
     4681 gtgtcactgt tcgcgcagga gctgggcgcg cgcaccggca tctcggcgaa gaagctggcg
     4741 cagcgggtaa ccgcactgcg ccaggcgtga gtccgatcct gtagagccga gccggtgctc
     4801 ggctctacct ccaggacgcg ccgttacttg gtgcggcgga ccttgggctg ggtgttcaca
     4861 ccgtcaacct tcatgtacca gacgcccatc accccgggct tgatgctcac ctggggtgac
     4921 gacttgcgca cgccggccag ggtcgtggca tcggtctgtt cccattcctg gccgttgtcc
     4981 agcacgtaga tgcggccctt gccgaagcca cggaactcgc cctgcagcac gccggtgatt
     5041 ggctcgttgc tgccgaaatc gaagaagccc cggttcttca cgatcacttc ctggcgtcct
     5101 tcctcgcgtg cctcctcgcg gacggcggcc acggcctggg tggtggccgc ctcgaccttg
     5161 ccctgcagcc agcggttgag cgtggccagt tccgccgcat ccagcttgtc cagcccggcg
     5221 gccttgaact cggcgggcga catctgctgc tgcaggtcgc cttccaccac gcgctgggcc
     5281 agcgcaggcg ccgatacggc cagcaacagc gcggcgcaag cgagcactcg tggacggaag
     5341 tgtggaacga tcgagggcat ggcgggactc tcctgggttt gcccgcgagt gtagcggcat
     5401 gtcctcatgc caggcgatgg tggccgcggc gattgtccct gaacggcgcc ggcgctagtg
     5461 taggggcctc tgtcttgcct gctcgatgct gtgaaccgcg cttccgtccc cggcctggat
     5521 gccttgttga accgtccctc ggcagcggtg ctgcccgctc cgctgcgcca ggccctgcgc
     5581 gggcactggg atgccccgga gtgcgaccac cagatgcgcg ccagctggtc ggtgctgggt
     5641 gacacccttg atgcgctgtc gatgctttca gccgacgaag gcgcagtggt cgcggccctg
     5701 ctgttcgacc ttcccgggtt gcgtgcccac ctggacgcgt tgccgctggg caaccacaag
     5761 gcagcggtga tcggcctgct cgacggccag gacgctgctg acccggtatg ggcgctgcat
     5821 gccggtcgcg aggccgggcg caacagtgaa gggctgcgcc gcctgttgct ggcgatcatc
     5881 cgcgacctgc gcgtggtgcc gatcctgctg gcccggcaac tggcgcggat gcgtgcggcc
     5941 gacaagctgg atgacgaaca gcgccgcgcg ctggcccagc tcacccgcga catccatgca
     6001 ccgctggcca accggctggg catctggcag ctgaagtggg agctggagga cctggccttc
     6061 cgccacctgg aaccggaaac ctaccggcgc atcgcccgtg aggtggacga gacccgcatc
     6121 gcgcgcgagc gctacgtcga gaacgtcaag aaggtgctgt cgcgcgaact ggtcgcgcag
     6181 ggcatcaagg ccgaggtcag tggccgcccg aagcacatct acagcatctg gcggaagatg
     6241 cagaagaagc ggctggcgtt cgaccagctg tacgacatcc gcgcggtgcg ggtgatggtc
     6301 gacgatgtcg ccgcctgcta tgccgcgctg ggcgtggtgc atgcactgtg ggcgccggtg
     6361 ccgagcgaat tcgatgatta catcgcccgt cccaaggcca acgactaccg ctcgctgcat
     6421 accgccgtgg tcggcccgga agggcgcacc atcgaagtgc agatccgcac ccacgagatg
     6481 cattcgcagg ccgaactggg cgtggccgcg cactggaagt acaaggaagg cggcaagggc
     6541 gcggagaagg ccttcgaccg caagatcacc tggatgcggc agctgctgga gcaggcgcag
     6601 gacgggcagg gtaacgaact ggccggggcg ctcgacgccg agctgaccga ggaccgggtc
     6661 tatgcgctga gcccgaagga cgaggtgctg gacctgccgc agggtgcaac gccgctcgat
     6721 ttcgcctacc aggtgcacac catggtcggg caccggtgcc gtggcgccaa ggtcaatggc
     6781 cgcatcgtgc cgctgaccta ccgcctgcgc agcggcgacc gcgtcgagat cctgaccggc
     6841 aaggaggccg acccgcgccg cgactggctg atgccggcca atggtttcct ggccagcaac
     6901 cgttcccgcg agaaggtgcg cagctggttc cacaagctgg accgtgcgcg caacgtgcag
     6961 gccggtcgcg aactgctcga gcgcgagctg aagcggctgg gcctgcagca ttcggatctg
     7021 gcagtggcgg cgaagaaatt ccacgccgac agtgtcgatg acctctacat ccaggtggcg
     7081 ctgggcgata ccgggccgaa ccaggtcagc cgcgccctgc tggaagccga gcgcgcggcc
     7141 agccagccgg cagccgcgcc ggcgttgccg cgcccgaccg cgcgccggga gaacctgggc
     7201 aagtccaagt tcaccgtgca gggcgtgggc aacctgctgg tgcagctggc gcgctgctgc
     7261 cagccggtgg caggcgagcc gatcgtcggc tacctcaccc gtagccgtgg tgtcaccgtg
     7321 catcgggcag actgcgcggc gctggcccgc ctggctgcca ccagcccgca gcggatcctg
     7381 ccggtggaat ggggccaggc cggtggcggc tacgaagtgg acgtggtggt cacggcggtc
     7441 gatcgccgct ggctgctgaa ggacatcacc aacctgatcg cacaggaaga cgcctacgtg
     7501 ctcgatattc acagtgacaa cgtgcgcaac agtggccgtg cccatctgcg cctgcggttg
     7561 aaggtgagcg actacggcca gctgtcgacc ctgctgggca agctggacgc gctgccgggc
     7621 gtgagcgagg cacgtcgcct cggctgagct tcacgctgcc ccggctaccc tgcacgcatg
     7681 gaacgcgagc ctccgcatcg cccgcatggc gctgaacatc ctgcgctgga ccgcgtccgc
     7741 cgcgaaggcc gctggtggtg gctgcaagca cgccacgcgc gccgggtctg gcgctgggcg
     7801 ctggtcgcgg cgctggccgt gttcgtgctg ctggtgctgc tgcgcaagcc gctggccgac
     7861 tggttctggg atgagccgca gatcgaacag ttgctggccg agggtgaccg cgcactcgcc
     7921 gcgggccggt tgagcgcggc cgatggcagt ggcgcacgcg agcgctacca ggcggtgctg
     7981 gcactggacg gtgatcgccc gcaggcgcgc gaaggcctgg cccgaaccgc tgcggcggca
     8041 ctgcagcagg cacgcgacag gctgcagaac aacgatctcg acggtagcgc acaggcactg
     8101 gcgttggccc gcgagctgca ggtgccgcag agcgaagccg aagcggttgc ccgccagctg
     8161 caggcgcgac gcaacgcggg ggccggcatc ggcgcgctgc tggcacaagc gcgcaatgcc
     8221 tttgcggccg ggcggcttga tgatggcgac agcagtgcat tgccgctgtt ccagcgcatc
     8281 ctggcagtgc agccggacaa tctgccggcg ctggaagggc gcgaggatgc cctgagcgat
     8341 ctgttgcagc aggcacgcac gctggccggg cgaggggagc tggccgaggc ggctgtgatc
     8401 gtgcagcgcg cccgccagtt cgatgccggc catgccgacc tgccggccag ccaggaggcg
     8461 ctggcacgtg ccgtggacct gcgcctgcgg caggcgcagc gcgcgttgca gcgccagcaa
     8521 ctggaaaatg cggcgaaggg cttcctggcc gtgctggccg tggcgccgga ggatcccacg
     8581 gcccagcgtg gccgcgagca ggtgctgcag gccgtgctgg cgcgcagcca gagccaggcc
     8641 gacgatttcc agttcgacgc agcacagcgt gatgcagcgc tggccgaggc gctgggcgcg
     8701 tcggccgcgg cgcgccagca gctggcgcag cgcctgcaac gtgcgcagca ggcacagcgg
     8761 tcgctgcaac agccggcggc cagcaacgcg caacgcgaac ggcagttgcg cgagctgctg
     8821 cgcaggatcg agcgcgccga gcgcgccggg cagtggatca gtccaccggg acacagcgcg
     8881 ttcgacgcgc tgcgtgaagc gcaggccctg gcgccgcgcg attcccgggt gaaagcggcc
     8941 gccgcgcgcc tgctgcccgc cagccgtgcc tgcttcgatg acaacctgcg gcagaaccgg
     9001 gtgcaggccg ccggcgcctg cctgcaggcc tggcagaccc tgtcgcccac tgcgaacggc
     9061 ctgcctgctg cccgccagcg cctggcacag cgctggcttg cgatcggcag cgaacgcctg
     9121 ggcaatggtg atgtcgcctt cgccgaacgc gccctgcagc aggccgccga gctcggtgcg
     9181 ggcgcgtcca gcagcgagta tcaacagctg cggcagcgcc ttcgcgatat cggtgtgccc
     9241 tcgccctgag cccgccgttg ccggcggggt cgttatagta gccagccccc gctgcccgcc
     9301 catggagtgc cgatgaccgt ccttgtttcc ggagccacca gccagatcgg ccggttcctg
     9361 ttgccgcgcc tgctgcaggt gcatggccag gtgcaggcgg tgagccggcg gccgcaaccg
     9421 gcgcaggacg gagtgcactg gctgtgcggg gatctggcca gcgcgctgga cagcgtgccg
     9481 tctgccgagt ggcaggcgat tgccagtttc gggccgctgg aagggttggc gcagtggttg
     9541 tcgcggcagg cccgcgcgcc ggctccacgg gtcatcgcca ccagctcgat gagtgtgctg
     9601 agcaagcagg attcggacca ggccgacgag caggacgtgg tggcgatgct gcagcggggc
     9661 gaacagggcc tcatcgagca ggccgagcgc ctgggcatgg cgtggacgat cctgcggccg
     9721 accctgatct atggcgccgg catcgaccgc agcatcaccc cgatcgtgca gcgcgcgctg
     9781 cgcctgcgcc tgttcccgat tccgcgggcc gagggcctgc gccaacccgt gcatgccgac
     9841 gatatcgccc gcgcggtggt ggcctgcatc accaccggtg cggcgtcggc gcgggtgctg
     9901 gagatcggcg gcggtgaacg cctgccgtat cacgcgatgt tccgccgcgt gcacgccagc
     9961 ctggcgcaac cgaccttgcc gcttccactg ccgggctttg cattgcgtgg cctggcggcg
    10021 gtgctgccgc gcgcgcgcgg cccggtatca cgcctgcagc aggacctggt cgccgacaac
    10081 ggtccgctgc tggcgctgct gggtgtacac ccgcggccgt tcaggccgga ggcggacatg
    10141 tggcagccga tgagtgccgc acaggcgctg cagcggatcg cagcgcatcc cggcaaccac
    10201 tgacggtgca gatccgcccc ccggcggagg ctctgctacc atcctcggcc ttgttccccg
    10261 cgagtacgtt ccatgcctga cgcgccatcc ggatcggccc ccgccgagcg cattggcgtc
    10321 gcgctgtgca cctacaacgg tgcacgctac ctgcaggcgc agttggacag catcctcgac
    10381 caggatcttc cggtgagcga agtggtgatc ggcgatgatg gttccagcga ccagacgttg
    10441 ccgttgctga aggccttcga ggtgcgcgcg cgggcgctgg gcatccgggt cgagatcgtc
    10501 cggcacccac gcaacctcgg ttatgtccgc aacttcgccg acgcgctgca gcgctgccag
    10561 gccgacatcc tgttcctgag cgatcaggac gatgtctggc atccgggaag ggtgcgccgc
    10621 tacgtgcagc gcttccgcgc tgatccgggc ctgttgctgg tgcacagcga tgcacggctg
    10681 gtggatgcgc agggcgcgcc gctgggccag cggctgctgg aggtgctggt ggtgcatccg
    10741 gccgaagtcg aactggaacg ctcgggccgt gcgatcgatg ccattctgct gcgcaacttc
    10801 gtcaccggcg cgacctgtgc gctgcgtcgt tcgctgctgg agggggcgct gccggtgccg
    10861 ccgggctgga gccacgacga atggctggcg gtgcacgcgt cgctgcgtgg agggctggac
    10921 atgctggccg agcccaccat cgattaccgg cagcatggca acaaccagat tggcgccagc
    10981 cgccgcggtt tcctgcagcg gctgcggcat ctcgatctgt tcgacgggaa ggcgcggcag
    11041 cgtaccgcgg ggcgcctgct ggccctggac gcgctgctgg tgcagcgcgg cgtccgcgtt
    11101 gcacctgaac gcttccaggg tctttccgcg ctggcctggc gcatggcctg gtcgcgtctg
    11161 caactgtatc gccgggcggg cgtgcaggcg cgctggatcg ctcacgacgc gccgcggctg
    11221 ttcgcacgct tggccaatgt gtacctggcc ggggcaggct ggcgcggcgt ccgcgcggcg
    11281 ttggcggggg cggccgcggg ctggcgggag cctcgcgctg cttgaactgc agtgaaaccg
    11341 caggccaccg cccgccagcc accacggcgc ctgcgttaga ctcgccagac cctatctgcc
    11401 cgcagcccca gtgccccgac gctacgattc cgacgacaac gacgatttcg acgacgacca
    11461 gcaggacgac agcccgctgt ggcggcgtcg cctgatcacc tggagcatgg ctgcggtcgc
    11521 gttgggattg ggtttcctga ttccctacac gctgtacctg aaccagcagg tgacccagcg
    11581 tttcggtgaa ctgcgctggc agatcccgac gcgggtgtat gcgcgcccgc tggtgctcac
    11641 gcccggcaag gcgatggatg cggccaccct gaagaccgag ctggccgcgt cggcctaccg
    11701 cgatgacggg cagggcaagg agccggccac ctatgcggtg aacggtgggc gcttcgtcat
    11761 ctccagccgc ggctacaacg acgtcgacgg ccgggtcgcc ccgcgccggg tggagctgtc
    11821 gctggccgat ggcggcgtgg cctcgctgcg cgatgccgac aaccgcaagg cgctgaaggc
    11881 cgcgcggcta gatccggcgc gcatcgccac cctgtacggc cagaagcagg aagaacgccg
    11941 cctgatccgc atggacgagg cgccggacct gctggtgact ggcctgcagg cggtggagga
    12001 caaggatttc aaccgtcacc acggtatcga tctgtccggc atcgcgcgcg cggtatgggt
    12061 gaccatccgc tccggtggcc agagccgcca gggcgcgtcc acgctgaccc agcagctggc
    12121 ccgcagcggc ctgctcggca tcggcaagga acagacggtc acccgcaagt tcaacgaagt
    12181 gctgtacgcg ctgatcatgg aagcgcgtta cgacaagcgc accatcttcg aggcctacct
    12241 caaccaggtg tacctgggcc agcgtggcag ccaggccatc cacggcatgt cctccggtgc
    12301 cgagttctgg ttcggccgcg acctgtcgtc gctggaaacc gagcagatcg cgctgctgat
    12361 cggcctggtc aagggcccgt ccttctacga cccgcggcgc aatccggaac gcgcgctgga
    12421 tcgccgcaac ttcgtgctgg gcaagctgca cgaggccacg ttgatcgacg atgccgagta
    12481 ccagcgcgcg ttgaaggcgc cgttgggcgt gccgaagacg ccgggcctgg tggcggccaa
    12541 ccgcttcccg gcctacgtcg acctggtccg ccgccagctg ggccatgact atccggagtc
    12601 ggcgctgcag ggcgccggcc tgagcgtgat gaccggcatg tcgccgtccg cgcaggccta
    12661 cgccgaaggc gcggtgaccc gtaccatcaa gtcgctggaa agcaagcgac gccccgaact
    12721 gcaggccggc atggtgctca ccgatgtgca caacggtgat gtgctggcgg tgatcggcag
    12781 ccgtgaggtc tccgaggtcg gcttcaaccg cgcgatcgag gcgcagcgtc cggtgggttc
    12841 gctgctcaag ccgttcgtgt acctgctggc gctggcacag ccggaccgct actcgctggc
    12901 cagctgggtg gacgattccc cggtgaccgt gcagctcggc cgcggccgca actggaaccc
    12961 cggcaacgcg gacaaccgca gccacggtac ggtgcgcctg atcgatgcgc tggcccattc
    13021 ctacaaccag gccaccgtgc gcgtcggcat gcaggtcggt cccgagcgcg tgacccagct
    13081 gattcacgta ctggccggca tcaaggccga ggcgaatccg gcggtgatcc tcggctcgac
    13141 cgaccagagc ccgtacgcga tggcgcagct gtaccagttc ctcgcgtccg gcggcgagat
    13201 ccagccgttg cacgcggtgc gtggcgtgct cgatccgcag ggcaagctgc tcaagcgcta
    13261 tgacaagacg ccggcgccgg cacaggaggg cgactcgatc gccgccaacc tgatcagcgt
    13321 cgggctgcag caggtggtcg ccagtggtac cgcgcagcgc ctcaacgccg acggcctggg
    13381 ccggctgcag ccggccggca agaccggtac caccaatgat ggccgtgaca gctggtacgc
    13441 cggttacacc ggcgatcatc tggcggtgat ctggatcggc aatgaccaga acgaacaggc
    13501 gggcctgtac ggcgctaccg gtgcaatgag ggtgtggtcc ggcattttcc agcgcctgcc
    13561 aagtgcgccg ctgcgcgtca gcaacaaggg cctggactgg cagtcggtgg cgcccaccgg
    13621 aatcaacagt accgatgaag gctgcccggg cgcgcgtcgc ttcccgttcg tggtgggcta
    13681 cgcgccggcc tatgcaccgt gcgcgccggc ggtatcgccg gacgggcagg gtggaaccga
    13741 gggcgaaggc ggtggctggc gcagctggtt cggcctggac cgcaagccgg acgcccctgc
    13801 ggaa
//
LOCUS       DAOKIP010000102        13749 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.102,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000102 DAOKIP010000000
VERSION     DAOKIP010000102.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 13749)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13749)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13749
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.102"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(24..1988)
                     /locus_tag="QEL58_002434"
     CDS             complement(24..1988)
                     /locus_tag="QEL58_002434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005408528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide transporter, OPT family"
                     /protein_id="HDS1676894.1"
                     /translation="MNHDAAPKQLTFRAVALAIVLAVVLSAANAYLGLFAGLTIATAI
                     PAAVISMGVLRLLGGGSILENNIVQTGASAGSSIAAGVIFTIPALVIMGYWPDFKYWW
                     VLGIAGLGGLLGVLFSVPLRRSMIVEDPLPFPEGKAAAEVLKAGENPGPGLKILGLSA
                     VIGAFVKLAAESGMRLIPDAWATSAYVGSSKITAFIGTNLSPALLGVGYIVGLNVGIV
                     VVSGSILTWHIAIPIYQAFFMNTDPALAASVATASSTEAAFAIWGAKMRYLGVGAMLI
                     GGIWTLISLRKSLLNGVKSGFAAARKSGGPVLAHTERDLPMKWMLVALVVFVLPLLAL
                     YQAIVGQWHVSIPMTLIMIVAGFLFVSVSAYLAGLIGSSNNPVSGITISTILFASAVL
                     VLLLGKDGLQPVGAFGAPLGAVAAIMIGAVVCCAAAVGGDNLQDLKAGYIVGATPWKQ
                     QLMLGIGAFSCALIMAPVLNLLATAYGIGVKSELHPNALAAPQANLMASVAKGLFGGE
                     LPWTFIGIGAVVGAAIIAFDSWLKSRNARFRVPVLAAAIGIYLPLELMVPIFLGGLIA
                     HLVERFHKVRADDEEGRDRVHKPGVLFAAGLITGEALMGIAIAVPIVVSSRADVLAVP
                     FHLPGAQWIGLAVLFLVGWLIYRTGKRAVA"
     gene            2359..2814
                     /locus_tag="QEL58_002435"
     CDS             2359..2814
                     /locus_tag="QEL58_002435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012479437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676895.1"
                     /translation="MPLCDHASAWSRVGAIEVTDHAGRPCFGLPRKERKRIGETPQVF
                     GVEVYDAITPPLRRLWSFDFSYPASLPLPPGACVLYGEVPANAAAGQAAMTLQSGRLY
                     EVTMSATRTGATRFYSARFCVKANADGSLRAIQVRYDDALGWSPAVCLP"
     gene            2819..4054
                     /locus_tag="QEL58_002436"
     CDS             2819..4054
                     /locus_tag="QEL58_002436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014036351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1624 domain-containing protein"
                     /protein_id="HDS1676896.1"
                     /translation="MDALVGISQRLLETGNCYVISCHAERTSYVASPSSPRLASIDQL
                     RGTVMLLMLLDHVRETFFLQHQVGDPMDAASVSPALFACRLLAHLCAPVFVLLTGLSA
                     WLYGQRQADPRRAIAAFLLKRGLFLVVLELTLVNFAWTFQFPPDTLYLQVIWAIGLSM
                     IALAGLLWLPRPALLVLGVLLVAGHNLFDGVRVEGDGVLAVLWKVLHQRDWIDTGVVR
                     LRTSYPVLPWIGVIVLGYLMGPWFARDRDPAQRQRWLLWAGLSVLALFALLRFANQYG
                     DAPWQYQTSTLRTWMSVFNITKYPPSLQFLLLTLGVGLLLLRLYEWPPVARALRPLAD
                     IGAAPMFFYLLHLYVLKLLYVAALATWGPTHGSLYALDSVAGLLLVACALAVAMYPPT
                     LLFGRFKARRRDLAWLRYL"
     gene            4175..5929
                     /locus_tag="QEL58_002437"
     CDS             4175..5929
                     /locus_tag="QEL58_002437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDS1676897.1"
                     /translation="MTVAATASDDFLGHPKGVYVCFFTEMWERFSFYGMKALLLLYLT
                     KYHLFGDKAGLDLLGAYGGLVYCIPVFGGMLADRWLGMRRAVLFGGILLVLGHLGMAF
                     EGHAAYRVNGEVVRDTSALAVTYLSLALIIMGVGFLKPNISTIVGKLYAKDDPRRDSG
                     FSLFYAGINLGALFSSLVCGFLGEAYGWKYGFGAAGIGMLAGLAMFLWGQKYLQGHAE
                     PPQPAALKQKVLGLPREWLIYLCTVLGVLPVAWLMWAAGNGAFALGGEISLALMLMLV
                     VLGGVLVWFAWFTGTKCTPVQRQQMIALMVLIFMALVFFTMYEQSYGSWVTFTDRLLT
                     KDIVPSLVITGGTPLPWSIISLLLAPLGFVVSARLSERRPGSSAPRTFFAAIVVLMLV
                     LLVRDCLVIPQTAGSLTYLGGLFLVLLAPAFAALWTWMDRRGWEPGKPVKSAWGLVIG
                     ALSFVPLALAAQQVGATGEMASVWWLVLAYFLLASGEMCLSPVGLSAVTQLAVPRVMS
                     LMMGTWFLATAFSETLAALFGKLAAIEVPEGESLDMAAAAGAYAHLFWLLMWIGLGCA
                     LAAFIAAPLLKRMMHGVK"
     gene            complement(5952..7937)
                     /locus_tag="QEL58_002438"
     CDS             complement(5952..7937)
                     /locus_tag="QEL58_002438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S9 family peptidase"
                     /protein_id="HDS1676898.1"
                     /translation="MKHVMLLAVLLLLCGASHARAAEIALDDYLRRAEFNDIQLSPTG
                     EYLAMTLPLEGATAVAVLRTRTMELVGNFRPPRNNHANSVDWVSDNRLLIGLAEKWGA
                     LDVPRSTGELYAMDADGKRGDLLVGYRARPDEPGLVSGRVVEPVAAFLADPLAGDERN
                     VLISLWPFANDTSARLERMDVITGRRVLVSRSPVQRATFTTDNAGVLRFARGAAADNI
                     NKLYYRQDDGRWTLLNDEGSSHRIERPIGFSADNHLAYLIVEQSTGPDAVVSWNPQTD
                     ERRTLLRDAVVDPASIIYQPGSRVPVGVQFVGATARSAFFDEQSPTARIQRMLEKAFP
                     GQRVSLLSATRDNARILVKVSSGGNPGDWFMFNTATREAAFLTARQRWFDRDGAASVR
                     PIALAARDGLPLHGFLTVPKSSDGRRLPMVVMPHGGPIGEFDDGGFERDNQLLAAAGY
                     AVLQVNFRGSGNYGRAHTQAAAKQWGQAMQDDVTDATRWAIAEGIADPQRICIYGASY
                     GAYSAMMGAVREPALYRCAAGYVGVYDLPLMFKRGDIQDRTSGVNYLNEWLGDPAALA
                     AVSPVNLAARITVPVLLAAGREDTRAPVQHTQRMEAALKQAGVPVEAVYYPREGHGFY
                     GEASQRDYYTRLLAFLSKHLGGANAQVAASVEKAKAP"
     gene            complement(8011..9993)
                     /locus_tag="QEL58_002439"
     CDS             complement(8011..9993)
                     /locus_tag="QEL58_002439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008268307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S9 family peptidase"
                     /protein_id="HDS1676899.1"
                     /translation="MRRIVLAVVLGAVSGGAAAATLDLDRFLRQESFTDIKISPGGEY
                     VAATVPLEAGTALAIYRIADMKMVGSFRPPRNDHAHTFDWVSNERLLVGMAQKLGLLD
                     RPTPTGELFGINANGKGGELLVGYRVADQSLGTNIKVKPAGMVAAYLSDELKDDDRNV
                     LVTVVPFVGNSHAQIERMDVMTGRRNAVARAPVADAHFTTDEQGEVRFARAAVTDGTQ
                     KLYYRAGSNSEWILLNDEALSKRIEVPLGFSADGRLAYLQVEQAEGPDAIVSWDPQSN
                     ERRTVLRDETADPSRIIRRPGSRVPVGALFLGGAPRTAFFDDASDEARLYRSLEAGLG
                     GPVYITSSTRDGRTVLVESWSGRNPGDFYLYDTVGKSARHLISRSDWVDPALTAEVRP
                     ISVKARDGRPLHGFLTVPHGRQARALPMVVLPHGGPIGVSDQGAYEAETQMLAAAGYA
                     VLQVNFRGSSGYGRAHMQAARKQWGLSMQDDVTDATRWAIEQGVADKDRICIYGASYG
                     AYAAMMGAVREPGLYQCAAGYVGIYDLPLMYARGDIQSDESGLAYLRNWLGSPNELAE
                     RSPVNLAGQVRVPVFLAAGGQDQRAPIVHSERMEAALKKAGSPVESLYVKNEGHGFYN
                     LANQRTYYSRLLAFLSRSLGGATAGEAAPAGSGKAP"
     gene            complement(10163..10798)
                     /locus_tag="QEL58_002440"
     CDS             complement(10163..10798)
                     /locus_tag="QEL58_002440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008267441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysE family transporter"
                     /protein_id="HDS1676900.1"
                     /translation="MFSVISASTGLGAWFSGAATGIGLFAVVGAQSAFILRQGILRKH
                     IVPVVATCAAIDAIFIFASVAGLRTLTSALPWLTTAVLWTGVAFLAWYAMKSARRAIA
                     GGGGMGEADSDDGSRRAVLMAAVGFSLINPHFWLDMMVIGSIAENFGNARMAFAAGVV
                     TASCLWLTAQGLGARLLAPLFTKPSTWRVLDGTIAVILSILALTLAVRGVH"
     gene            10937..11842
                     /locus_tag="QEL58_002441"
     CDS             10937..11842
                     /locus_tag="QEL58_002441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator ArgP"
                     /protein_id="HDS1676901.1"
                     /translation="MRIDHAQLRALAAVIREGSFDRAAQSLNVTPSAISQRVKALEDR
                     VGRLLVKRGTPATATAEGQVLVQLAEQTALLEHDALHRMGLADEDLPQASIPVAVNHD
                     SLETWFPQAASQFAQSTGTTLDLRVEDQDHTVELLRQGTVLGAVTTLDEPVQGCQIHA
                     LGSIRYAATCTPEFRERHFAKGVTAQALAQAPVLVFNRKDEMQSRFARRMAGDDLPST
                     APTWWIPSTRAFVQANLGGMGWTMNPLPLVKRHLDAGRLVYVRQRAWEDVPLYWQHWK
                     GDVQTMALLTRAVLDASSALIRRKR"
     gene            11934..12380
                     /locus_tag="QEL58_002442"
     CDS             11934..12380
                     /locus_tag="QEL58_002442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014036347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDS1676902.1"
                     /translation="MPLSVRDARPDDAAACIDLRGRTRENAFSAAQLAELGITAESWA
                     AGIAHGESIGRIAWEGERMVGYCFADRASGEVLVLALLPDYEGRGIGRQLLQEVVSLT
                     RDAGHQRLFLACSADPRSRSHGFYRRLGWRPTGELDEAGDEILELR"
     gene            complement(12443..12931)
                     /locus_tag="QEL58_002443"
     CDS             complement(12443..12931)
                     /locus_tag="QEL58_002443"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676903.1"
                     /translation="MHRQVISLIATFAAATALPAHSKELPPVIELHARCVDDAQCRFR
                     GQTLNVELELRNSGSEPVSLPLEYIRSRGPSVKVKDNHSGKTTALRSGMAAAALRDQM
                     QELRAGQSLRIGFPIKPQELTRFALRPMDVTLQLSVNLTPGAGSTEAQVVQAQLRVLD
                     AD"
     gene            complement(12916..>13749)
                     /locus_tag="QEL58_002444"
     CDS             complement(12916..>13749)
                     /locus_tag="QEL58_002444"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676904.1"
                     /translation="LGALAKVAGIVAPLLKTMPLQTPPFAPPGTPAPEEPVAPQCWVD
                     DHDVRIDRDVDGRYYEAYDVNGDKHDYAFPVSYRIEIPLHAQGEVVVSIKVQPMPQAG
                     VTAAEVTATRARMEQGIDQFWNGRFTLDIHDPQCGTRSFPLRYEVRWVQGGSDYKLII
                     HRSYDREQVEFPDIDVSVSTTPWTFAHEFAHTLGVPDEYSYNDPDEETVRYLQPDGTL
                     DPEVLVAVPDSRALSDPSATIMNSVDCAVTLPRHAWNIAREIRELLSRQIGREITCTV
                     K"
BASE COUNT         2208 a         4634 c         4579 g         2328 t
ORIGIN      
        1 ccggaaggat tccgacccac cccttacgcc acggcgcgct tgccggtgcg gtagatcagc
       61 cagccgacca ggaacagcac ggccaggccg atccactgtg cgcccggcag gtggaacggc
      121 acggccagca cgtcggcgcg gctgctgacc acgatcggca cggcgatggc gatgcccatc
      181 agcgcttcgc cggtaatcag gccggcagcg aacagcacgc ccggcttgtg cacgcggtcg
      241 cggccttctt cgtcatcggc gcgcaccttg tggaagcgct cgaccaggtg ggcaatcagg
      301 ccaccgagga agatcggcac catcagttcc agcggcaggt agataccgat ggcggcagcc
      361 agcaccggca cgcggaaacg tgcattgcga gacttcagcc agctgtcgaa ggcgatgatc
      421 gcggcgccga ccacggcacc gatgccgatg aaggtccagg gcagctcacc accgaacagg
      481 cccttggcca ccgaggccat caggttggcc tgcggcgcgg ccagcgcgtt cgggtgcagc
      541 tcggacttca cgccgatgcc gtaggcggtg gccagcaggt tcagcaccgg ggccatgatc
      601 agcgcgcacg agaacgcacc gatgcccagc atcagctgct gcttccacgg ggtggcgccg
      661 acgatgtagc cggccttgag gtcctgcagg ttgtcaccgc cgaccgcggc ggcacagcac
      721 accaccgcgc cgatcatgat cgcggccacc gcacccagcg gcgcaccgaa ggcaccgacc
      781 ggctgcaggc catccttgcc cagcagcagc accagcaccg ccgaggcgaa caggatggtg
      841 gagatggtga tgcccgagac cgggttgttg gacgaaccga tcaggccggc caggtaggcc
      901 gagaccgaaa cgaacaggaa gccggcgacg atcatgatga gggtcatcgg gatcgacaca
      961 tgccactggc cgacgatggc ctggtacagg gccagcagcg gcagcacgaa gaccaccagg
     1021 gccaccagca tccacttcat cggcaggtcg cgctcggtgt gcgccagtac cgggccaccg
     1081 ctcttgcgcg cagccgcgaa gccgctcttg acgccgttca gcagcgactt gcgcagcgag
     1141 atcagggtcc agatgccacc gatcagcatc gcgccgacgc ccaggtagcg catcttcgcg
     1201 ccccagatgg cgaacgcggc ttcggtggac gaagcggtgg cgaccgacgc ggccagggcc
     1261 ggatcggtgt tcatgaagaa ggcctggtag atcggaatgg cgatgtgcca ggtcaggatc
     1321 gaaccggaca ccaccacgat gccgacgttg aggccgacga tgtagcccac gccgagcagg
     1381 gccggcgaca ggttggtgcc gatgaaggcg gtgatcttgg agctgccgac gtaggccgaa
     1441 gtggcccagg catcgggaat caggcgcata ccgctttcgg cggccagctt gacgaaggca
     1501 ccgatcaccg ccgacaggcc gaggatcttc aggcccgggc ccggattctc accggccttg
     1561 agtacttcgg cggcggcctt gccttccggg aacggcagcg ggtcttcgac gatcatcgaa
     1621 cggcgcagcg gcaccgagaa cagcacgccc agcaggccgc ccaggccggc gatgcccagc
     1681 acccaccagt acttgaagtc gggccagtag cccatgatca ccagcgcggg gatggtgaag
     1741 atcacaccgg cggcgatcga cgaaccggcc gaagcaccgg tctgcacgat gttgttttca
     1801 aggatggagc caccgcccag caggcgcagc acgcccatgg aaatcaccgc ggcgggaatg
     1861 gcggtggcga tggtcaggcc tgcgaacaga ccgagatagg cgtttgcggc cgacagcacc
     1921 accgccagca cgatggccag ggccactgcg cggaaggtga gctgcttggg cgcagcgtcg
     1981 tggttcatgg aagcccctgc tggcaaaaaa tcccgatcac gctagcgttc agggggcgtc
     2041 acgtccagtg cggttcggga gggttgcagc cgggtcgccg gtgggatagt cgcttttgac
     2101 caaactcggc caacgcatca agcccatcag gcacatatcc caatgggctg ccgggtaccg
     2161 gataccgcgg ccccctgccc cacatgggca ggccagccac cgctgcagca ttccagccaa
     2221 catcgtttga agtgtctcga ctccccatgc atcgtgttca cgatccaaat gctgtcgccg
     2281 agccgaccta tgaaaaacac acttcgtatg cgcccgatca aggggccggt catggccatc
     2341 gtgaccttgc tctgctcgat gcccctttgt gatcacgcat cggcctggag tcgcgttggc
     2401 gcgatcgagg tcactgacca cgccggcaga ccctgtttcg ggcttcccag gaaagagcgc
     2461 aagcgtatcg gtgagactcc tcaggtgttt ggtgtggagg tgtatgacgc gattactcca
     2521 ccgctgcggc ggctatggtc tttcgacttt tcctatcccg cgtcactccc gcttccaccc
     2581 ggcgcttgcg tcctctatgg agaagtgcca gccaacgccg ctgcagggca agcggccatg
     2641 acgctgcagt ctgggcgcct gtatgaggtc acgatgtcgg ccaccagaac gggcgccacc
     2701 cggttctata gcgcccgatt ctgcgtgaag gcgaacgccg atggcagcct gcgggcgatc
     2761 caggtccgct acgacgacgc tctgggctgg agtcctgcgg tctgcctgcc ctgagctgat
     2821 ggacgcgctc gtcggcatct ctcagcgcct gctggaaacg ggtaattgtt atgttatatc
     2881 ctgtcacgcc gaacgaacat cgtacgtggc ttctccttcc tcccctcggc tggcctccat
     2941 cgaccagctg cgcggcaccg tcatgctgct gatgctgctc gaccacgtgc gcgagacctt
     3001 tttcctgcag caccaggtcg gcgacccgat ggatgcagcc agcgtatccc ctgccctgtt
     3061 cgcttgccgc ctgctggccc atctgtgcgc cccggtgttc gtgctgctca caggcctgtc
     3121 ggcgtggctg tatggccagc gccaggccga cccgcgccgc gcgatcgccg ccttcctgct
     3181 caagcgcggc ctgttcctgg tggtgctgga actgaccctg gtcaacttcg cctggacctt
     3241 ccagttcccg ccggacacgc tgtacctgca ggtgatctgg gccattggcc tgagcatgat
     3301 cgcgctggcc ggcctgctgt ggctgccgcg cccggcgctg ctggtgctgg gcgtgctgct
     3361 ggtggccggc cataacctgt tcgatggcgt gcgcgtggaa ggcgacggcg tgctggccgt
     3421 gctgtggaaa gtgctgcacc agcgcgactg gatcgacacc ggcgtcgtgc gcctgcgcac
     3481 gtcctacccg gtactgccgt ggatcggggt gatcgtgctg ggctacctga tggggccgtg
     3541 gttcgcgcgc gaccgcgacc cggcgcagcg ccagcgctgg ctgctgtggg caggcctcag
     3601 cgtgctggcc ctgttcgcgc tgctgcggtt cgccaaccag tatggggatg ccccgtggca
     3661 gtaccagacc agcacgctgc gcacgtggat gagcgtgttc aacatcacca agtacccgcc
     3721 gtcattgcag ttcctgctgc tgaccctggg cgtgggcctg ttgctgctgc gcttgtacga
     3781 atggccgcca gtggcccgcg ccctgcgccc gctggccgac atcggagcgg cgccgatgtt
     3841 cttctacctg ctgcacctgt acgtgctgaa gctgctgtac gtggctgcgc tggctacgtg
     3901 gggccccacc cacggcagcc tgtacgcgct ggattcggtg gccgggctgc tgctggtggc
     3961 ctgcgcgctg gcggtggcga tgtacccgcc gacgctgctg ttcggccggt tcaaggcccg
     4021 ccgccgcgac ctggcttggc tgcgctacct gtaggccgtc aatcgggcgg ccatccacgc
     4081 gtggcgtgga gctactgaag gctggcgggg cgctaccggg cgcgggcacg gctgcaggcc
     4141 tataatcgcg ccctttccgc tgttcccgcc gtcgatgacc gttgccgcta ccgcctccga
     4201 cgacttcctg ggccatccca agggcgtcta cgtctgcttc ttcaccgaga tgtgggagcg
     4261 cttctccttc tacggcatga aggcgctgct gctgctctac ctcaccaagt accacctgtt
     4321 cggcgacaag gccgggctgg acctgctcgg cgcctacggc gggctggttt actgcatccc
     4381 ggtgttcggc ggcatgctgg ccgaccgctg gctgggcatg cgccgggcgg tgctgttcgg
     4441 cggcatcctg ctggtgctcg gccacctggg catggccttc gagggccatg ccgcgtaccg
     4501 ggtgaacggc gaagtggtgc gcgacacctc ggcgctggcg gtgacctacc tgtcgctggc
     4561 gctgatcatc atgggcgtgg gcttcctgaa accgaacatc tccaccatcg tcggcaagct
     4621 gtacgccaag gacgatccgc gccgtgactc gggcttctcg ctgttctacg ccggcatcaa
     4681 cctgggcgcg ctgttctcct cgctggtgtg cggcttcctc ggtgaggcct acggctggaa
     4741 gtacggcttc ggcgcggccg gcatcggcat gctggctggc ctggcgatgt tcctgtgggg
     4801 ccagaaatac ctgcagggcc atgccgaacc gccgcaaccg gccgcgctga agcagaaggt
     4861 gctgggcctg ccgcgcgaat ggctcattta tctgtgcacg gtgctcggtg tgctgccggt
     4921 ggcgtggctg atgtgggccg ccggcaacgg tgccttcgcg ctgggcggtg aaatcagcct
     4981 ggcgctgatg ctgatgctgg tggtgctggg cggcgtgctg gtctggttcg cgtggttcac
     5041 cggcacgaag tgcacaccgg tacagcgcca gcagatgatc gcgctgatgg tactgatctt
     5101 catggcgctg gtgttcttca cgatgtacga gcagtcctac ggctcgtggg tgaccttcac
     5161 agaccgcctg ctgaccaagg acatcgtgcc atcgctggtg atcaccggcg gtacgccgct
     5221 gccgtggtcg atcatttcac tgttgcttgc accgctgggc ttcgtggtca gcgcgcggtt
     5281 gtccgagcgt cgtccgggct cgtcggcacc acgcaccttc ttcgccgcca tcgtcgtgct
     5341 gatgctggtg ctgctggtgc gcgactgcct ggtgattccg cagaccgccg gttcgctgac
     5401 ctatcttggc ggcctgttcc tggtactgct ggcaccggct ttcgccgcat tgtggacgtg
     5461 gatggaccgc cgcggctggg agcccggcaa gccggtgaag tcggcatggg gcctggtgat
     5521 cggtgcgctg tcattcgtgc cgctggcgct ggccgcacag caggtcggcg ccaccggtga
     5581 gatggccagt gtctggtggc tggtgctggc ctacttcctg ctggccagcg gcgagatgtg
     5641 cctgtcgccg gtcggccttt ccgcagtgac ccaactggcg gtgccacggg tgatgagcct
     5701 gatgatgggc acctggttcc tggccactgc gttctcggaa acgctggccg cgctgttcgg
     5761 caagctggcg gccatcgagg tgccggaagg cgaatcactc gacatggcgg ctgccgccgg
     5821 tgcctacgca cacctgttct ggctgctgat gtggatcggc ctgggttgtg cgttggccgc
     5881 cttcatcgct gcgccgctgc tgaagcggat gatgcacggg gtgaagtaag gccccgtgca
     5941 gcggcgcccg ctcagggcgc cttggccttt tccactgatg ctgcaacctg ggcgttcgcc
     6001 ccgcccaggt gcttcgacag gaacgccagc aggcgcgtgt agtagtcgcg ctggctggct
     6061 tcgccgtaga agccatgccc ttcgcgcggg tagtacaccg cttccaccgg caccccggcc
     6121 tgcttcaggg ccgcttccat ccgctgcgtg tgctgcaccg gcgcacgcgt gtcttcgcgc
     6181 ccggccgcca gcagcaccgg caccgtgatc cgggccgcca ggttcaccgg cgagaccgct
     6241 gccagcgccg cgggatcgcc gagccactca ttcaggtagt tcacgcccga agtgcggtcc
     6301 tggatatcac cgcgcttgaa catgagcggc aggtcgtaca cgcccacata gcccgcggcg
     6361 caccggtaca acgccggctc acgcacggcg cccatcatgg ccgagtacgc gccgtagctg
     6421 gcgccataga tgcagatgcg ctgcgggtcg gcgatgcctt cggcaatggc ccagcgcgtg
     6481 gcgtcggtca cgtcatcctg catggcctgg ccccattgct tcgccgcagc ctgggtgtgg
     6541 gcacgaccat agttgcccga cccgcggaaa ttgacctgca gcaccgcata gccggctgcg
     6601 gccagcagct ggttgtcacg ctcgaaacca ccatcatcga attcgccgat gggcccgccg
     6661 tgcggcatca ccaccatcgg caggcggcgg ccgtcactgc ttttgggtac ggtcaggaag
     6721 ccgtgcaacg gcaggccatc gcgcgcagcc agggcgatcg gacgcacgct ggcggctccg
     6781 tcgcggtcga accagcgctg gcgcgcggtc aggaacgccg cttcccgggt ggcggtattg
     6841 aacatgaacc agtccccggg attgccgccc gaactgacct tgaccaggat gcgcgcgttg
     6901 tcacgggtgg ccgacagcag gctgacccgc tgcccgggga aagccttctc aagcatgcgc
     6961 tggatccgcg cggtgggcga ctgctcgtcg aagaacgcgc tgcgcgcggt cgctcccacg
     7021 aactgcacgc cgaccggcac acggctgccc ggctggtaga tgatcgaggc cgggtcgacc
     7081 actgcgtcgc gcagcagagt tcgccgctcg tcggtctgtg gattccagct gaccaccgca
     7141 tccgggccgg tggactgttc gacgatgagg taggccaggt ggttgtcggc ggaaaaaccg
     7201 atggggcgtt cgatgcggtg gctgctgccc tcgtcgttga gcagggtcca gcgcccatcg
     7261 tcctgccggt agtagagctt gttgatgttg tccgcggcgg cgccgcgggc aaagcgcagt
     7321 acgccggcgt tgtcggtggt gaaggttgcc cgctgcaccg gcgagcgcga gaccagcacg
     7381 cggcggccgg tgatgacgtc catccgctca agccgtgcgc tggtgtcgtt ggcgaacggc
     7441 cacagcgaga tcagtacgtt gcgctcgtct ccggccagcg gatcggcgag gaacgccgcc
     7501 accggctcga ccacacggcc gctgaccagg cccggctcat ccggtcgcgc gcggtagccg
     7561 accagaaggt caccccgctt gccatcggca tccatcgcgt agagctcgcc ggtggagcgc
     7621 ggcacatcca gcgcccccca cttctcggcc agcccgatca gcaggcgatt gtcgctcacc
     7681 caatcgacgc tgttggcgtg gttgttgcgc ggcggccgga aattgccgac cagttccatg
     7741 gtgcgggtgc gcagcacggc caccgccgtt gccccttcca gaggcagggt catggccagg
     7801 tactcgccgg tgggcgaaag ctggatgtcg ttgaactcgg cgcgccgcag gtagtcatcc
     7861 agcgcgatct cggctgcccg cgcgtggctg gcaccgcaca gcaacagcag gacggcgagc
     7921 agcattacat gcttcatggt gtcccctttc tgaccgggca gcctggctgc ccggcatgcc
     7981 gaagcgcgcg tccaacgcgc gccgatgcag ttacggtgcc ttgccgctgc cggccggtgc
     8041 tgcttcgccg gcggtggccc cacccaggct gcgcgacagg aaggccagca gcctgctgta
     8101 gtaggtgcgc tggttggcca ggttgtagaa gccatgccct tcgttcttga cgtacaggct
     8161 ctccaccggc gatccggcct tcttcaacgc cgcctccatg cgctcgctgt gcacgatcgg
     8221 tgcacgctgg tcctggcccc ctgcggccag gaataccggc acgcgcactt gcccggccag
     8281 gttcaccggc gagcgctctg ccagctcatt gggcgatccc agccagttgc gcaggtaggc
     8341 caggcctgat tcatcgctct ggatatcgcc ccgggcatac atcagcggca agtcgtagat
     8401 gccgacataa ccggccgcac actggtagag acccggctcg cgcaccgcgc ccatcatcgc
     8461 cgcataggcg ccgtagctgg cgccgtagat gcagatgcgg tccttgtcgg ccacgccctg
     8521 ttcgatggcc cagcgcgtgg catcggtgac gtcatcctgc atcgacagcc cccattgctt
     8581 gcgcgctgcc tgcatgtgcg cccggccata gccggaagaa ccgcggaaat tgacctgcag
     8641 caccgcgtat ccggccgctg ccagcatctg ggtctcggcc tcgtaggcgc cctggtcgga
     8701 aacaccgatc ggcccaccgt gcggcagcac caccatcggc agcgcacgcg cctggcgccc
     8761 gtgcgggacc gtaaggaagc catgcagcgg gcgaccatcg cgtgccttga cgctgatcgg
     8821 gcggacctcg gcggtcagcg ccgggtcgac ccagtcgctg cggctgatca ggtgccgggc
     8881 gctcttgccc accgtgtcat acagatagaa gtcacccgga ttgcggcctg accagctctc
     8941 caccagcacg gtcctgccat cgcgcgtgct ggaggtgatg tagaccggcc ctcccaggcc
     9001 cgcttcaagg ctgcggtaga ggcgtgcttc gtccgaggcg tcatcgaaga acgccgttcg
     9061 cggcgcgccg ccaaggaaca gcgcccccac cggcacgcgg ctgcccgggc ggcggatgat
     9121 gcgtgacgga tcggcggtct catcgcgcag cacggtgcgc cgctcattgc tctgcgggtc
     9181 ccagctgaca atcgcgtcgg gcccttcggc ctgctcgacc tgcagatagg ccaggcgacc
     9241 atcggccgag aaaccgagcg gcacttcgat gcgcttgctc agggcctcgt cgttgagcag
     9301 gatccactcg ctgttgctgc ccgcccggta gtagagcttc tgcgttccat cggtgacggc
     9361 agcgcgcgcg aaacgcacct cgccctgctc atcggtggtg aagtgcgcat cggcaacagg
     9421 cgcgcgcgcc accgcgttgc ggcgaccggt catcacgtcc atgcgctcga tctgcgcatg
     9481 cgagttgccg acgaagggaa ccacagtgac cagcacgttg cggtcgtcgt ccttcagttc
     9541 gtcgctgagg tacgcagcga ccatgcccgc cggcttgacc ttgatgttgg tacccaggct
     9601 ctggtcggca acccggtacc cgaccagcag ctcaccgccc ttgccgttgg cattgatgcc
     9661 gaacagctcg ccggtcggcg tgggccggtc cagcagcccg agtttctgcg ccatgcccac
     9721 cagcaaccgc tcgttgctga cccagtcgaa ggtatgggca tggtcgttgc gtggcggacg
     9781 gaagctgccg accatcttca tgtcggcaat gcgatagatc gccagtgccg tcccggcttc
     9841 cagcggtacc gtggcggcaa cgtactctcc gcccggcgaa atcttgatgt cggtgaacga
     9901 ttcctgccgc aggaaacgat ccagatccag cgtcgccgcc gctgccccgc ccgatacagc
     9961 ccccagcacc acagccagca caatcctgcg catccttccc ccatggaaaa ccggacagcc
    10021 tgtccggata cgcgattcta ggcacgtaca tgcggcggat gccacagggg caaaaaaaaa
    10081 cgacggcacc gttgccggtg ccgtcgttac cactaccttg gagagagagt caggacgtgg
    10141 gttcgggggg gcgtgcgccg ggtcaatgga ccccgcgcac cgccaacgtg agggccagga
    10201 tgctgaggat cacggcgatg gtgccgtcca gcacgcgcca ggtactgggc ttggtgaaca
    10261 gcggcgccag caggcgcgcg cccaggccct gcgcggtcag ccacaggcag ctggcggtga
    10321 ccacgccggc ggcgaacgcc atgcgggcat tgccgaagtt ctcggcaatc gagccgatca
    10381 ccatcatgtc cagccagaag tgcgggttga tcagcgagaa accgaccgcg gccatcagta
    10441 ccgcacggcg gctgccgtca tcgctgtcag cctcgcccat gccgccgcct ccggcgatcg
    10501 cacggcgtgc cgacttcatc gcataccagg ccaggaacgc cacgccggtc cacagcacag
    10561 cggtggtcag ccacggcagc gccgaggtga gcgtgcgcag gccggccacg ctggcgaaga
    10621 tgaagatggc atcgatggcc gcgcaggtgg caaccaccgg cacgatgtgc ttgcgcagga
    10681 tgccctggcg cagaatgaag gcgctctggg ccccgaccac ggcgaacagg ccgatgccgg
    10741 tagctgcacc agagaaccag gcaccgaggc cggtgctggc ggagatgacc gagaacatgg
    10801 gatggactgc cttgtattgc ttggggggac ggtgcctcgc gaaggcggac agcaccggaa
    10861 cgggcgccat tgtcgcgccg caacatgaaa aagacgagct aaacttccta aaccaacatt
    10921 agcggaactt aattcgatgc gtatcgacca tgcccagctg cgcgccctgg ccgcggtgat
    10981 ccgcgaaggc agcttcgatc gcgctgcgca gtcgctgaat gtcacccctt cggccatctc
    11041 gcagcgggtc aaggcgctgg aggaccgggt cggccgcctg ctggtcaagc gcggcacccc
    11101 ggccaccgcc accgccgagg gccaggtgct ggtgcagctg gccgagcaga ccgccctgct
    11161 cgaacacgac gcgctgcacc ggatgggcct ggccgacgag gacctgcccc aggccagcat
    11221 tccagtagcg gtgaaccacg acagcctgga aacctggttc ccgcaggccg cctcgcagtt
    11281 cgcgcagagc accggcacca ccctggacct gcgcgtggag gaccaggacc acaccgtgga
    11341 actgttgcgc cagggcacgg tgctgggcgc ggtgaccacc ctggacgagc cggtgcaggg
    11401 ctgccagatc cacgcgctgg gcagcatccg ctacgccgcg acctgcaccc cggagttccg
    11461 cgagcgccac ttcgccaagg gcgtgaccgc gcaggcactg gcgcaggcgc cggtgctggt
    11521 gttcaaccgc aaggatgaga tgcagtcacg ctttgcccgg cgcatggccg gcgacgacct
    11581 gccgagcacc gcgccgacct ggtggattcc ctccacccgc gccttcgtgc aggccaacct
    11641 gggcggcatg ggctggacca tgaacccgct gccgctggtc aagcggcacc tggacgccgg
    11701 ccgcctggtc tacgtgcggc agcgcgcgtg ggaagacgtg ccgctgtact ggcagcactg
    11761 gaagggtgac gtgcagacca tggcgctgct gacccgcgcg gtgctggacg cctcctcggc
    11821 actgatccgg cgcaagcgct gagcggcgct ccatgcaatc tccacgcgtc ctccacaccg
    11881 ggtccatgcg cgatgcggat actggcgggc cgttcattgc aaggatgccc cgcatgcccc
    11941 tctccgtgcg cgatgcccgc cccgacgatg ccgccgcgtg catcgacctg cgcgggcgta
    12001 cccgcgagaa cgccttcagt gccgcgcagc tggcggagct gggcatcacc gcggaaagct
    12061 gggcggccgg catcgcccac ggcgaatcga tcggccgcat cgcctgggaa ggcgagcgca
    12121 tggtgggcta ctgcttcgcc gaccgcgcca gcggcgaggt gctggtgctg gcgctgctgc
    12181 cggactacga gggccgtggc atcggccgcc agctgctgca ggaggtggtc agcctgaccc
    12241 gcgatgccgg ccaccaacgc ttgttcctgg cctgctcggc cgatccgcgc tcacgctcgc
    12301 atggcttcta ccgccgcctg ggctggcgcc ccaccggtga gctcgatgag gccggtgacg
    12361 agatcctgga actgcgctga agcagggcac ggccggatga tcgggccgca ttgacccggc
    12421 gccgcatcgc tgggcgcggc attcagtctg cgtcgagcac gcgcagctgc gcctgcacca
    12481 cctgcgcttc ggtactgcct gcaccgggcg tcaggttcac cgaaagctgc agggtcacat
    12541 ccattgggcg caacgcgaac cgggtcagtt cctgcggctt gatcggaaaa ccaatgcgca
    12601 gggactggcc cgcacgcagc tcctgcatct gatcccgcag cgcggcggcg gccatgccac
    12661 tgcgcagggc ggtcgtcttc ccggagtggt tgtccttcac cttcaccgaa ggaccacgac
    12721 tgcggatgta ctccagcggc aatgacaccg gctcactgcc gctgttgcgc agctccagct
    12781 cgacattgag cgtctgccca cggaaacggc actgggcatc gtccacgcag cgcgcatgaa
    12841 gttcgatcac gggaggcagc tccttgctat gggccggcag cgcggtggcg gcggcaaaag
    12901 tggcaatcag tgaaatcact tgacggtgca tgttatctcc cggccgatct ggcggctcag
    12961 cagctcgcgt atctcgcgcg cgatgttcca ggcatgtcgc ggcagggtca cggcgcagtc
    13021 gaccgaattc atgatggtgg ctgacgggtc ggacagcgcg cgcgaatcag gaacggcaac
    13081 cagcacttcc ggatcgaggg taccgtcggg ctggaggtag cgcacggttt cctcgtccgg
    13141 atcattgtag gaatactcgt cgggcacgcc cagcgtatgg gcgaactcgt gggcgaaggt
    13201 ccacggcgtt gttgataccg agacgtcgat atccggaaac tcgacctgct cgcggtcgta
    13261 gctgcggtgg atgatcaatt tgtagtcgct gccgccctgc acccagcgca cttcgtagcg
    13321 gagcgggaaa ctgcgggtac cgcactgcgg gtcgtgtatg tccagggtga agcggccatt
    13381 ccagaactga tcgattccct gctccatgcg tgctcgcgtc gcggtcactt cggccgcggt
    13441 gaccccggcc tgtggcatcg gctgcacctt gatcgacacc accacctcgc cctgcgcatg
    13501 cagcgggatt tcgatgcggt agctgaccgg gaaggcgtaa tcgtgcttgt caccgttgac
    13561 gtcgtacgcc tcgtaatagc gtccatccac atcgcgatcg atccggacat cgtgatcgtc
    13621 cacccagcac tgcggcgcca ccggctcttc cggcgcgggc gtgccgggcg gtgcgaacgg
    13681 cggcgtctgc aacggcatcg tcttcagcag cggcgccacg atgcccgcta ccttggccag
    13741 cgcacccag
//
LOCUS       DAOKIP010000103        13599 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.103,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000103 DAOKIP010000000
VERSION     DAOKIP010000103.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 13599)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13599)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13599
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.103"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(61..798)
                     /locus_tag="QEL58_002445"
     CDS             complement(61..798)
                     /locus_tag="QEL58_002445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006460407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIMPL domain-containing protein"
                     /protein_id="HDS1676905.1"
                     /translation="MRLTATPLLLALSLALGTSMTAHAAPPSPSIAAPAEGTLLNISA
                     NAEATRVPDVATLSAGVVTQAADGNSAMRQNAQQMDKVLAAIKAAGIAERDVQTSGVS
                     LNPQYRYADNEAPKITGYQASNTVSLKVRDIAKLGKVLDALAAQGANQINGPSFEIDQ
                     PEPVYDEARLAALKKAQARAQTYAKSLGLQVRRIVSISENAGGGYRPMPMMRAMAAGA
                     AMDKATPVAPGESTVSVNLDVVFELGR"
     gene            930..1538
                     /gene="maf"
                     /locus_tag="QEL58_002446"
     CDS             930..1538
                     /gene="maf"
                     /locus_tag="QEL58_002446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019662106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum formation inhibitor Maf"
                     /protein_id="HDS1676906.1"
                     /translation="MLYLASRSPRRNQLLARLGRPFQALDLEVVEQRAAAESAEQYVC
                     RVAADKARAGLARVLADDPQARVLGSDTEVVLDGEVFGKPVDAADARAMLARLAGRTH
                     QVMTAVVVVGAQGLDSELVISEVTFAPIDATDIAAYVATGEPLDKAGAYAIQGGAERW
                     IEHLSGSYSGVMGLPLLHTDRLLARCGVPAPIADAAREAADV"
     gene            1531..3018
                     /gene="rng"
                     /locus_tag="QEL58_002447"
     CDS             1531..3018
                     /gene="rng"
                     /locus_tag="QEL58_002447"
                     /EC_number="3.1.26.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002802933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease G"
                     /protein_id="HDS1676907.1"
                     /translation="MSEEILVNVTPRETRVAVIENGMLQELHIERGWRRGVVGNIYKG
                     KVQRVMPGMQAAFVEVGLERAAFLHANDVVRPAPVASADTENTTLPPPASVPIVELLR
                     DGQDIVVQVVKDPIGTKGARLTTQISIPSRYMVLLPQSKVVGVSARIEDETERARLKA
                     LVTELSAQHGGYGYIVRTNAEGQPAEAIAEDIAYLSRVWNVVERRGREAASCSIIYED
                     LSLPLRSVRDLIRKDVDKVKVDSKETFGQLQAFVAKYMPVLAEKLELYSGDRPIFDMF
                     GVEDEIGRALDKQVPLKSGGYLVIDQTEAMTTIDVNTGSFLGQRNLEETVFRTNLEAA
                     QAVARQLRLRNLGGIIIIDFIDMDDAEHRRQVLRTLEKALARDHAKTTVYDFSPLGLV
                     EMTRKRTVESLERQLSETCPQCSGRGSIKTTETVTYEIFREITRAVRQFDAARLLVIA
                     STKVVARITDEESSAVAELEEFLGKSIRFQADEQYLQEQFDVVLL"
     gene            3049..6894
                     /locus_tag="QEL58_002448"
     CDS             3049..6894
                     /locus_tag="QEL58_002448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014647937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02099 family protein"
                     /protein_id="HDS1676908.1"
                     /translation="MSAPPRLRLRRIRRHFIAACAVGLVGLALLVGSISQLLPLAERH
                     PDRIAAWLSERAGQPVRFDQLQTAWTRRGPLLQLKGLRIGAGQGLAIGEAEVLVSMYS
                     GLLPGRSLTELRLRGLALDLQQGEDGRWSVRGLPQSTKGGDPLDALRRLGELQVVEGR
                     LGVRAPGLGVDTTLPRIDLRLRVNGDRLRVGVRAWAQADALPLTAVLDVDRVRGNGQA
                     WLGADPVDFNAWSPLLAAGGVRLREGKGELNLWLTLRDFAPVALTTDSDLRDVRIDGA
                     PMPDLAAPYLKLQRLQARLRWQRQAEGWALQVPRLRLKTEDGEQQLDGLQLQVGRQLR
                     VSSGDVQAGTALRALALSDRLDPGLRHWLFLSRPQLDVRELQLSGQRDGPLWAQGELK
                     SLGFASVGHSPGLRGLGGRFEGDADGFSLQLQPRQQLQFDWPTGFGVRHDLHLAGQVV
                     GWRDEAGGWRIGTAAMRVEGTDYAADVRGGVWFQGDGTRPWLQLAAKLDDVPMTAAKR
                     FWIHSRMSKGATDWLDMALAGGQVRNGVGLVSGDLDDWPFDNNDGRFEATGHITNGDI
                     RFQHDWPLMSQVDADIAFIGPGFDMHGRGDLAGVAVQTFEAGIPDFGQQPLYVRADTQ
                     SEAGRLLAMLRQSPLHKDYGDTLDNLTAAGPAHVTFDLLQPLHLDEGGGHLQGTVDLD
                     GVKLVDKRFQLTFDNMHGQARYGNGGFGAEELAVRHLGQDGRLSLRAGSYVHDSKLAF
                     ESLLSAHLDAGVLIDRAPEMAWLKPYIAGTSPWTIAVNLPKVAPGAPAPPSELRLSSD
                     LVGTRLDLPAPLDKPAGEPLATTVAAQLPMGAGRIDVAFGQRLALAARSHNNRTGVQV
                     TLGSDHVDREPPPSGLAVNGRSPTLDALEWISLARGGGDDDGMPLRAVDVQVGKLMLI
                     GGVFEQTRLQLQPGAQALDVRLDGPSLAGRLSVPNAEGGTISGQLDRVHWQSLPVAPG
                     APAAPARVQAGANDMDPAKLPPFALDIADLKFGKVVLGQAVLRTRPLANGLNVDELRF
                     RAPDQEIDINGRWLGRTGDARTELTAQVRSEDLGGLMQNLDYGGQLRGGSGQAQLQAS
                     WSGGPSDFQLANLQGRLDLHARNGQLLELEPGAGRVLGLLSVTQLPRRLMFDFRDFFS
                     KGFAFNQVDGSVQFGQGMARTDKVLIEGPAANITIRGQADLRNQQFDQTIDVNPRAGN
                     LLTVVGAVAGGPVGAALGAATNAVLSKPLGEIGARTYKVTGPWKEPKVEVIERSRDKA
                     PPAPAPGIPPTVTDLPRSR"
     gene            6955..8400
                     /gene="tldD"
                     /locus_tag="QEL58_002449"
     CDS             6955..8400
                     /gene="tldD"
                     /locus_tag="QEL58_002449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007972594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metalloprotease TldD"
                     /protein_id="HDS1676909.1"
                     /translation="MTDIALTLAQDRLLRPGGLDTAGLERTFGQLLGPGVDFGDLYFQ
                     HARRESWSVEDGIVKDGAHSIEQGVGVRAISGEKTGFAYSDDIHADALRVAAQSARAI
                     SREGGAQSGRSLLRGSARALYPALDPIDGIGNEAKVEVLKRLDGYLRAADPRVKQVMV
                     SLSGGVDTVLIARSDGVLGADVRPLVRLNVQVIVEHNGRRESGYAGGGGRYGYAELFA
                     DGRPEAFAREALRQALVNLEAVPAPAGVMPVVLGPGWPGVLLHEAVGHGLEGDFNRKG
                     TSVYAGRIGERVAAPGVTIVDDGTLDGRRGSLNIDDEGHPSQCTTLIEDGILVGYMQD
                     SLNARLMGVAPTGNGRRESFAHLTMPRMTNTYMRAGQHDPQEMIRSVKKGLYAVNFGG
                     GQVDITSGKYVFSATEAYLIEDGRITTPVKGATLIGNGPETMQKVRMVGNDLALDEGV
                     GICGKDGQSVPVGVGQPSLLIEGITVGGTQA"
     gene            complement(8442..9029)
                     /locus_tag="QEL58_002450"
     CDS             complement(8442..9029)
                     /locus_tag="QEL58_002450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019338623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-associated protein"
                     /protein_id="HDS1676910.1"
                     /translation="MRGRDEETGEFHDKSRSQNRRDALDVLALGEKLVSLTPAQLARL
                     PIPEDLLPHIAECKRITAHIAHKRQLAFLAKHMRREEDATLDAIRDALDANSETGRRE
                     VAMMHRAEDWRDRLLAEGDTALAALLNDYPQADRQQLRTLVRNAQAEKAKNKPPRAYR
                     EIFQVLRGLMLPAALGLKAAADEADDVETGEADED"
     gene            9098..10465
                     /gene="pmbA"
                     /locus_tag="QEL58_002451"
     CDS             9098..10465
                     /gene="pmbA"
                     /locus_tag="QEL58_002451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019662101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metalloprotease PmbA"
                     /protein_id="HDS1676911.1"
                     /translation="MNVIAPEVAVGDDSPARLERLADLSQQLLDRARALGASQAEVSC
                     SEDRGLEVNVRLGEVETVQSTRDRGIAVTVYFGKRKGSASTGDLNEASLAATVEQACA
                     IARHTEDDPAAGLAEAALMARDFPDLDSWHPWALQADEAVDLALACEQAGRGADARIS
                     NSDGASVSSMQSVSVYANSHGFIGRERGTHHSVGCALIAGTGDGMQRDGWYTGGLARE
                     DLEAADSVGRRAAERTVARLQPRSLPTGSMPVLFAPEVARSLVGHLLSAVSGGALYRQ
                     ASFLLDSVGQRLFPEWMQIEELPHLRRGLRSAAFDGDGVATRASALVSDGVLQRYVLG
                     SYSARKLGLQTTANAGGVHNLQLAANAGSLQEIARQMGDGLLVTELMGQGVNGVTGDY
                     SRGAGGFRVENGEIQYPVDGITIAGNLREMFSSIEAVGSDVDPRSHIRTGSILLGRMT
                     IAGND"
     gene            10553..10924
                     /locus_tag="QEL58_002452"
     CDS             10553..10924
                     /locus_tag="QEL58_002452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014647933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4870 domain-containing protein"
                     /protein_id="HDS1676912.1"
                     /translation="MSEFDNVPPPPATTDAPADQRTMALAAHLLGIFTWFIGPLIIWL
                     INKDDASKAFVTDQAKEALNFQITITIAMLICIVLTLVIIGGILAPIVGILNLVFCII
                     AAVKANNGEAYRYPFALRLVK"
     gene            complement(11018..11896)
                     /locus_tag="QEL58_002453"
     CDS             complement(11018..11896)
                     /locus_tag="QEL58_002453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008264747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HDS1676913.1"
                     /translation="MTAEALFARWRDRIESQLDAALPSPAEAPQGLHQAMRYSVLGGG
                     KRMRPMLVYASGHLFGAQPEALDAAAMAVELIHAYSLVHDDLPAMDDDALRRGKPTTH
                     IAFDEATAILAGDALQARAFGLLADAPLPATLRVACLQTLAHASGAAGMCGGQALDID
                     ATGQQQTLAALTRMHALKTGALIRAAVRMGALCGQAHEPQLAQLDRFADALGLAFQVR
                     DDILDVEASSEQLGKTAGKDQAQDKSTFPALLGMDGAKAQLQELATRMHSILAGHGEE
                     ADALRALATLAVERDH"
     gene            complement(11886..12146)
                     /locus_tag="QEL58_002454"
     CDS             complement(11886..12146)
                     /locus_tag="QEL58_002454"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII small subunit"
                     /protein_id="HDS1676914.1"
                     /translation="MAKKSPENASPVAQFEQSLESLEQLVEQMETGELSLEASLSAYE
                     RGVGLYRQCQQALEQAELRVRLLSDPAQPEAAEPFDPPSHDG"
     gene            complement(12183..13469)
                     /gene="tilS"
                     /locus_tag="QEL58_002455"
     CDS             complement(12183..13469)
                     /gene="tilS"
                     /locus_tag="QEL58_002455"
                     /EC_number="6.3.4.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005418067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA lysidine(34) synthetase TilS"
                     /protein_id="HDS1676915.1"
                     /translation="MTAFPTLVPLDVPLLVGYSGGVDSTVLLHWLCRCAQASGTPLRA
                     VHVHHGLQSAADDWVQHCRQQCTALGIDLAVHHVRVATGTGLGIEGAARQARRAAFAA
                     ELRDGETLALAQHQDDQAETFLLRALRGSGVDGLAAMSVHSRFGGHALWRPLLQVPRD
                     ALLDYAHQHALHWIEDPSNGDDHADRNFLRLQVLPLLRQRWPHAAAALAGSAAHCGQT
                     RELLDEEDAELIAHLEVAPRVLSLQLLRQISPGRAARVLRAWVLGHDAAPLPATVLQQ
                     ALAELLPADNDRQARVGWHDHAIQQWRDHAYLLPAALPVLPRDWQAEWDGRTPLPLPD
                     GGQLRLQGAAAFEHALQVRARVGGERIQLPGRQHSHALKDCLQREHLAPWRRAQLPLI
                     FDGPQLLAAADVVIAAPLQAWLQAHGAQLQWRPGGW"
BASE COUNT         2088 a         4498 c         4850 g         2163 t
ORIGIN      
        1 aggcatgaaa aaaggcgggc cccgttcggg acccgcctgg ttcggcacgg gcggcggcga
       61 tcagcggccc agttcgaaca ccacgtccag gttgaccgac acggtcgatt cacccggcgc
      121 gaccggggtg gccttgtcca tcgccgcccc ggcggccatg gcacgcatca tcggcatcgg
      181 gcggtaaccg ccaccggcgt tctcggagat gctgacgatg cggcgcacct gcaggcccag
      241 ggacttcgcg taggtctggg cacgggcctg ggccttcttc agcgccgcca ggcgggcttc
      301 gtcatacacc ggttcgggct ggtcgatctc gaagctgggg ccgttgatct ggttggcacc
      361 ctgcgccgcc agtgcgtcca gcaccttgcc gagcttggcg atgtcgcgca ccttcaggct
      421 gaccgtgttg ctggcctggt agccggtgat cttcggtgct tcgttgtcag catagcggta
      481 ctgcgggttg aggctgacac cgctggtctg cacgtcgcgc tcggcaatgc cggcggcctt
      541 gatcgcggcc agcaccttgt ccatctgctg ggcgttctgg cgcatggcgc tgttgccatc
      601 ggcggcctgg gtaaccacgc cggccgacag ggtggccacg tccggcacgc gggtggcctc
      661 ggcgttggcc gagatgttca gcagggtgcc ttccgcgggg gcggcgatcg acggcgacgg
      721 cggggcagca tgggcggtca tcgaggttcc aagggcaagg gacagggcga gcagcagcgg
      781 ggtggcggtc aggcgcatgg agaactcctt gttgtgccgg tgagggtggt gtcgtagcga
      841 tgaacgcgct gtgagcctgt tcggggttga acgcgttccg gaacgggttg ccgacgattc
      901 aggtggcggc ctcaggttat gctgtgccga tgctctatct tgcttcccgc tccccccgac
      961 gcaaccagtt gctggcccga ctcggacgcc ccttccaggc cctggacctg gaggttgtcg
     1021 agcagcgcgc tgcggctgaa agtgccgaac aatatgtctg ccgggtcgcc gccgacaagg
     1081 cgcgcgccgg gctggcccgg gtgctggccg atgacccgca ggcgcgggtg ctcggttcgg
     1141 acaccgaagt ggtgctggac ggtgaagtgt tcggcaagcc ggtcgatgcc gccgatgcgc
     1201 gggcgatgct ggcgcggctg gccgggcgca cccaccaggt gatgaccgcc gtagtggtgg
     1261 tcggcgcgca agggctggac agtgagctgg tcatctccga ggtgaccttc gcgccgatcg
     1321 acgccaccga catcgccgcc tacgtagcta ccggcgaacc gttggacaag gccggtgcct
     1381 acgccatcca gggcggcgcc gaacgctgga tcgagcacct gtccggcagc tactccggcg
     1441 tgatgggcct gccgttgctg cacactgatc gtttgctggc gcgctgcggc gtgccggccc
     1501 ccattgccga tgccgccagg gaggctgcag atgtctgagg aaatcctggt caatgtgacc
     1561 ccgcgcgaga cccgggtcgc ggtgatcgaa aacggcatgc tgcaggaact gcacatcgag
     1621 cgcggctggc gccggggtgt ggtcggcaac atctacaagg gcaaggtgca gcgggtcatg
     1681 cccggcatgc aggccgcctt cgtcgaggtc gggctggagc gcgccgcgtt cctgcacgcc
     1741 aacgacgtgg tgcgtccggc cccggtggcc agcgccgata ccgagaacac caccctgccg
     1801 ccgccggcca gcgtgccgat cgtcgaactg ctgcgcgacg gccaggacat cgtggtgcag
     1861 gtggtgaagg atccgatcgg caccaagggc gcgcgcctga ccacgcagat cagcattccc
     1921 tcgcgttaca tggtgctgct gccgcagtcc aaggtggtgg gcgtgtcggc ccgcatcgag
     1981 gacgagaccg agcgtgcacg gctgaaggcg ctggtgaccg agctgtcggc ccagcatggt
     2041 ggctacggct acatcgtgcg caccaatgcg gagggccagc cggccgaggc catcgccgag
     2101 gacatcgcct atctgtcacg ggtgtggaac gtggtcgagc gccgcggccg cgaagccgcc
     2161 tcctgcagca tcatctatga agacctgagc ctgccgctgc gttctgtgcg cgacctgatc
     2221 cgcaaggacg tggacaaggt gaaggtcgat tcgaaggaga ccttcggcca gctgcaggcc
     2281 ttcgttgcca agtacatgcc ggtgctggcc gaaaagctgg agctgtattc cggtgaccgc
     2341 ccgatcttcg acatgttcgg ggtggaggat gagatcggcc gcgcgctgga caagcaggtg
     2401 ccgctgaaat cgggtggcta cctggtgatc gaccagaccg aggcgatgac caccatcgac
     2461 gtcaacaccg gttcgttcct cggccagcgc aacctggaag agacggtgtt ccgcaccaac
     2521 ctggaggccg cacaggcggt ggcgcggcag ctgcggctgc gcaacctggg cggcatcatc
     2581 atcatcgact tcatcgacat ggacgatgcc gagcatcgcc gccaggtgct gcgcacgctg
     2641 gagaaggcgt tggcccgcga ccatgccaag accaccgtct acgacttctc gccgcttggc
     2701 ctggtggaga tgacgcgcaa gcgcacggtc gagagcctgg agcgccagct gtcggaaacc
     2761 tgcccgcagt gcagtggccg cggcagcatc aagaccaccg aaacggtgac ctacgagatc
     2821 ttccgtgaga tcacccgcgc ggtgcgccag ttcgatgctg cgcgcctgct ggtgatcgct
     2881 tcgaccaagg tggtcgcgcg catcaccgac gaggaatcct cggcggtggc cgagctggag
     2941 gagttcctcg gcaagagcat ccgcttccag gcggacgagc agtacctgca ggagcaattc
     3001 gatgtcgttc tgctctgatc ctcgccggcc gcaggccggc ggcggccgat gagcgcgccg
     3061 ccgcgcctgc gactgcgaag gatccgccgt catttcattg ccgcgtgtgc ggtgggcctg
     3121 gtcgggcttg ccttgctggt gggcagcatc agccagctgc tgccgctggc cgagcgccat
     3181 cccgacagga tcgctgcgtg gctgagcgag cgtgccggcc agccggtgcg tttcgaccag
     3241 ctgcagactg cgtggacccg ccgtggcccg ttgctgcagc tgaagggcct gcgcatcggc
     3301 gccggccagg gcctggcgat cggcgaggcg gaagtgctgg tgtcgatgta cagcgggctg
     3361 ctgccgggac gttcgctgac cgagttgcgc ctgcgtggcc tggcgctgga cctgcagcag
     3421 ggcgaggacg gccgctggtc ggtgcggggc ctgccgcagt caaccaaggg cggtgacccg
     3481 ctggatgcgc tgcgccggct gggcgaactg caggtggtcg agggccgcct gggcgtgcgc
     3541 gcgccgggcc tgggcgtcga taccacgctg ccgcgcatcg acctgcgcct gcgcgtcaac
     3601 ggcgaccgcc tgcgcgtggg cgtgcgtgcc tgggcgcagg ccgacgcact gccactgacc
     3661 gcggtgctgg atgtggaccg cgtgcgtggc aacggccagg cctggctggg cgccgatccg
     3721 gttgatttca acgcctggtc gccgctgctg gcagccggcg gcgtccgcct gcgagaaggc
     3781 aagggcgagc tgaacctgtg gctgaccctg cgtgatttcg ctcccgttgc gctgaccacc
     3841 gattcggacc tgcgcgacgt ccgcatcgat ggtgctccga tgcccgacct ggcagctccg
     3901 tacctgaagc tgcagcgcct gcaggcacgt ctgcgctggc agcgccaggc cgaaggctgg
     3961 gccctgcagg tgccgcgcct gcgcctgaag accgaagacg gcgagcaaca gcttgacggc
     4021 ctgcagctgc aggtcggcag gcagctgcgg gtgagttccg gcgacgtgca ggccggcacc
     4081 gcgctgcgcg cgctggcgct gagtgatcgc ctcgaccccg gcctgcgcca ctggctgttc
     4141 ctgtcccggc cgcaactgga tgtgcgtgag ctgcagctgt ccggccagcg tgatggcccg
     4201 ctgtgggcgc agggtgaact gaaatcgctg ggctttgcca gcgtgggcca ttcgccgggc
     4261 ctgcgcggcc tggggggccg tttcgagggc gatgccgatg gtttcagcct gcagctgcag
     4321 ccacgccagc agctgcagtt cgattggccg accggattcg gcgtgcgcca tgacctgcac
     4381 ctggcaggac aggtggtggg ctggcgagac gaagcgggcg gctggcgcat cggcaccgcg
     4441 gcgatgcgcg tggaaggcac cgactatgcc gccgacgtgc gcggtggtgt ctggttccag
     4501 ggtgatggca cccggccgtg gctgcagctg gcggccaagc tggacgacgt gccgatgacc
     4561 gcggccaagc gtttctggat ccattccagg atgagcaagg gcgccaccga ctggctcgac
     4621 atggcactgg ccggtggcca ggtgcgcaac ggtgtcggcc tggtcagcgg cgacctggac
     4681 gactggccgt tcgacaacaa cgatggccgc ttcgaggcca ccggccacat caccaatggt
     4741 gacatccgtt tccagcacga ctggcccctg atgagccagg tcgacgccga tatcgccttc
     4801 atcggccccg gcttcgacat gcacgggcgc ggcgacctgg ccggtgtggc ggtgcagacg
     4861 ttcgaggcgg gcattccgga tttcggccag cagccgctgt acgtgcgcgc cgacacccag
     4921 agcgaggccg gcaggctgct ggcgatgctg cggcagagtc ccttgcacaa ggactatggc
     4981 gacacgctcg acaacctgac cgcggcaggc ccggcgcatg tgaccttcga cctgctgcag
     5041 ccgctgcacc tggatgaagg cggcggccat ctgcagggca cggtcgacct cgacggtgtg
     5101 aagctggtcg acaagcgctt ccagctgacc ttcgacaaca tgcatgggca ggcccgctac
     5161 ggcaacggcg gtttcggtgc cgaggaactg gcggtgcgcc acctcggcca ggacggtcgc
     5221 ctgagcctgc gtgccggcag ctacgtgcat gacagcaagc tggcgtttga atcgctgctg
     5281 tcggcccacc tcgatgccgg cgtgctgatc gaccgcgcgc cggaaatggc atggctcaag
     5341 ccgtacatcg cgggcacctc gccgtggacc atcgcggtca acctgcccaa ggttgcaccg
     5401 ggtgcgccgg cgccgcccag cgagctgcga ttgagttcgg atctggtggg cacccgcctg
     5461 gacctgcctg cgccactgga caagccggcc ggcgaaccgc tggcgaccac ggtggccgca
     5521 cagctgccga tgggggccgg tcgcatcgac gtggcctttg gccagcgcct ggcgctggct
     5581 gcgcgcagcc acaacaaccg caccggcgtg caggtgaccc tgggcagcga tcatgttgat
     5641 cgcgagccac cgccgagcgg gctggccgtc aacggtcgca gcccgaccct ggacgcactg
     5701 gagtggatca gcctcgcgcg cggaggcggt gacgatgacg gcatgccgct gcgtgcggtg
     5761 gatgtgcagg tcggcaagct gatgctgatc ggtggtgttt tcgaacagac ccgcctgcag
     5821 ctgcagccgg gcgcgcaggc gctggacgtg cgcctggatg gaccttcgct ggcaggtcgc
     5881 ctgagcgtgc ccaatgccga gggtggcacc atcagcggcc agctggaccg cgtgcactgg
     5941 cagtcgctgc cggtggcgcc gggtgcgccc gcggcgccgg cgcgggtgca ggccggtgcc
     6001 aacgacatgg acccggccaa gctgccgccg ttcgcgctgg acatcgccga cctgaagttc
     6061 ggcaaagtgg tgctggggca ggcggtgctg cgcacgcgcc cgctggccaa tggcctgaac
     6121 gtggacgagc tgcgcttccg cgcgccggac caggagatcg acatcaacgg ccgctggttg
     6181 ggtcgtaccg gtgacgcccg taccgaactg accgcgcagg tacgcagtga agacctgggc
     6241 ggcctgatgc agaacctcga ctacggtggc cagctgcgtg gcggctccgg gcaggcacag
     6301 ctgcaggcgt cgtggagtgg cggtccttcg gacttccagc tggccaacct gcagggccgg
     6361 ctcgacctgc acgcacgcaa cggccagctg ctggagctgg agcccggtgc cggccgcgtg
     6421 ctaggcctgc tcagcgtcac ccagttgcca cggcgcctga tgttcgactt ccgcgacttc
     6481 ttctccaagg gcttcgcgtt caaccaggtc gacggcagcg tgcagttcgg ccagggcatg
     6541 gcccgtaccg acaaggtgct gatcgaaggc cctgcggcga acatcaccat ccgcggccag
     6601 gccgacctgc gcaaccagca gttcgaccag accatcgacg tcaacccgcg tgccggcaat
     6661 ctgctgaccg tggtcggcgc ggtggccggt gggccggtgg gcgcggcact cggcgcggcc
     6721 accaatgcgg tattgtccaa accgttgggc gagatcggcg cccgtaccta caaggtgacc
     6781 ggcccatgga aggagccgaa ggtggaagtg atcgaacgca gccgcgacaa ggcgccgccc
     6841 gctccggccc ccggcattcc gccaaccgtc accgacctgc cacgctcgcg ctgagcgtgg
     6901 ctttcctgtt cacggggctt gcctcggcgc ccccgcatcc ccagatcgag agccatgact
     6961 gatatcgccc tgacgcttgc ccaagaccgc ctgctgcgcc ccggcggcct ggataccgct
     7021 ggcctggagc gcaccttcgg ccagctgctg gggcccggtg tcgactttgg tgacctctac
     7081 ttccagcacg cccgccgcga gagctggagc gtggaggacg gcatcgtcaa ggacggtgcc
     7141 cattccatcg agcagggcgt gggcgtgcgg gccatttccg gcgagaagac cggcttcgcc
     7201 tactccgatg acatccatgc cgatgcgctg cgggtagcgg cgcagtcggc gcgcgcgatc
     7261 tcgcgcgaag gcggcgcgca gtccgggcgc tcgctgctgc gtggcagtgc gcgtgcgctg
     7321 tacccggcgc tggatccgat cgacggtatc ggcaacgagg ccaaggtcga ggtgctcaag
     7381 cgcctggacg gctatctgcg tgccgcggac ccgcgcgtga aacaggtgat ggtcagcctg
     7441 tccggcggcg tggataccgt gctgatcgcc cgcagcgacg gcgtgctggg cgccgacgtg
     7501 cgcccgctgg tgcgcctgaa cgtgcaggtg atcgtcgagc acaacggccg ccgcgagtcc
     7561 ggctatgccg gcggcggtgg ccgctatggc tatgcggaac tgttcgccga cggccggcct
     7621 gaagcgtttg cgcgcgaggc gctgcgccag gcgctggtga acctcgaagc ggtaccggcg
     7681 ccggccggcg tgatgccggt ggtgctcggc ccgggctggc cgggtgtgct gctgcatgag
     7741 gcggtcggtc acggcctgga gggcgacttc aaccggaagg gcaccagcgt ctatgccggc
     7801 cgcatcggtg aacgcgttgc ggcgccgggc gtgaccatcg tcgacgacgg cacgctggat
     7861 ggccgccgcg ggtcgttgaa catcgacgac gaaggccacc cgagccagtg caccacgctg
     7921 atcgaggacg gcatcctggt cggctacatg caggacagcc tcaatgcccg cctgatgggc
     7981 gtggcaccga ccggcaacgg gcgccgcgaa tcgttcgcgc acctgaccat gccgcgcatg
     8041 accaacacct acatgcgtgc cggccagcat gacccgcagg agatgatccg ctcggtgaag
     8101 aagggcctgt atgcggtcaa cttcggcggc ggccaggtcg acatcaccag cggcaagtat
     8161 gtgttctcgg ccaccgaggc ctacctgatc gaggatggcc ggatcaccac gccggtgaag
     8221 ggcgccaccc tgatcggcaa tggcccggaa accatgcaga aggtgcgtat ggtcggcaac
     8281 gacctggccc tcgacgaagg cgtgggcatc tgtggcaagg acgggcagag tgtgccggtg
     8341 ggagtcggcc agccttcgct gttgatcgag ggcatcaccg tcggcggtac ccaggcctga
     8401 gccgggcgat ggccagtgcc accgcccacg ccggggagga ctcagtcctc gtcggcttcg
     8461 ccggtctcga cgtcgtcggc ctcatcggcc gcggccttga ggcccagcgc ggccggcagc
     8521 atcaggccgc gcagcacctg gaagatctcg cgataggcgc gcggcggctt gttcttcgct
     8581 ttctcggcct gcgcattgcg caccagcgtg cgcagctgct ggcggtcggc ctgcgggtaa
     8641 tcgttgagca gtgcggccag cgctgtgtcg ccttctgcca gcaggcggtc gcgccagtct
     8701 tccgcgcgat gcatcatcgc cacttcgcgg cggccggttt cgctgttcgc gtccagcgca
     8761 tcgcggatcg catccagcgt ggcgtcctct tcgcgacgca tgtgcttggc caggaacgcc
     8821 agctggcgct tgtgggcgat atgggcggtg atgcgcttgc actcggcgat atgcggcagc
     8881 aggtcttccg ggatcggcag gcgcgccagc tgggccgggg tcagcgacac cagcttctcg
     8941 cccagggcca ggacatcgag cgcgtcgcgc cggttctggc tgcggctctt gtcgtggaat
     9001 tcaccggttt cttcgtcgcg tccgcgcatc gtccctacct gatctcaaaa aaagtcgccc
     9061 ggcgtgatgc cgggcccaac ctgtacagga taaagcattg aacgtgatcg cccctgaagt
     9121 ggccgtcggc gacgacagcc cggcccggct ggaacggctg gccgaccttt cccagcagct
     9181 gctcgaccgc gcccgcgcgc tgggcgccag ccaggccgag gtcagctgca gcgaggaccg
     9241 cggtctggag gtcaatgtcc gcctcggcga ggtcgagacc gtgcagtcca cccgcgaccg
     9301 cggcatcgcg gtgacggtct atttcggcaa gcgcaagggc agtgccagca ccggcgacct
     9361 gaacgaggcc agcctggcgg ccacggtcga gcaggcctgc gcgatcgccc ggcacaccga
     9421 ggacgacccg gctgccgggc ttgccgaggc ggcgctgatg gcccgcgact tccccgacct
     9481 ggacagctgg cacccctggg cactgcaggc agacgaggcg gtggacctgg ccctggcctg
     9541 cgagcaggcc ggtcgcgggg ccgatgcacg catcagcaat tccgacggtg cctcggtgtc
     9601 gagcatgcag agcgtatcgg tctatgccaa ttcgcatggc ttcatcggcc gcgagcgcgg
     9661 aacccaccat tcggttggtt gcgccctgat cgctggcact ggcgatggca tgcagcggga
     9721 tggctggtac accggcggcc tggcccgcga ggacctggag gcggccgaca gcgtgggccg
     9781 ccgcgccgcc gagcgtaccg tggcccgcct gcagccgcgt tcgctgccga ccggcagcat
     9841 gccggtgctg ttcgccccgg aagtggcccg cagcctggtc ggccacctgc tgtcggcggt
     9901 atcaggcggc gccctgtacc ggcaggccag cttcctgctg gacagtgtcg gccagcggct
     9961 gttcccggag tggatgcaga tcgaggaact gccgcacctg cgccgcggcc tgcgttcggc
    10021 cgccttcgac ggtgacggcg tggcgacccg tgcgtcggcc ctggtcagcg acggggtgct
    10081 gcagcgctac gtgctgggca gctattcggc gcgcaagctg ggcctgcaga ccaccgccaa
    10141 tgccggtggc gtgcacaacc tgcagctggc cgccaacgcc ggctcgctgc aggagattgc
    10201 ccgccagatg ggcgacgggc tgctggtgac cgagctgatg gggcagggcg tgaacggggt
    10261 gaccggtgac tactcgcgcg gcgccggcgg tttccgtgtc gagaacggcg agatccagta
    10321 cccggtggac ggcatcacca tcgccggcaa cctgcgcgag atgttcagca gcatcgaggc
    10381 ggtcggcagc gacgtcgacc cgcgctcaca catccggacc ggttcgatcc tgctgggacg
    10441 gatgaccatt gccggtaatg attgatggca ttgatggcgt aagctatgcg cgcctgacgc
    10501 gaccagcttg gtgctggtgg gtcaagacca cccaatgaaa aggagttttg tcgtgagtga
    10561 attcgataac gtcccgccgc cgccggccac cactgacgcg ccggccgacc agcgcaccat
    10621 ggccctggcc gcgcacctgc tgggcatctt cacctggttc atcggccccc tgatcatctg
    10681 gctgatcaac aaggatgatg ccagcaaggc tttcgtgacc gatcaggcca aggaagcact
    10741 gaacttccag atcaccatca ccatcgcaat gctgatctgc atcgtgctga ccctggtgat
    10801 catcggtggc atcctggccc cgatcgtcgg catcctgaac ctggtgttct gcatcatcgc
    10861 cgcggtcaag gccaacaacg gcgaagccta ccgctatccg ttcgcgctgc gcctggtcaa
    10921 gtaaatacgg ctgcacgtgg atatggaaac gcccggccat gccgggcgtt tttgtttgcg
    10981 gcgcggggta gcgccaggcc atgaccggtg gcctcgatca gtgatcccgt tccaccgcca
    11041 gcgtcgccag cgcgcgcagc gcatcggctt cctcgccatg gccggccagg atcgagtgca
    11101 tgcgcgtggc aagctcctgc agctgggcct tcgcgccgtc catgccaagc agggcgggaa
    11161 acgtgctctt gtcctgcgcc tggtccttgc cggcggtctt gcccagctgt tcggaactgg
    11221 cctcgacatc gaggatgtcg tcacgcacct ggaacgccag gccaagtgca tcggcgaagc
    11281 ggtcgagctg cgccagctgt ggttcgtggg cctggccgca cagcgcaccc atgcgcaccg
    11341 ccgcacggat cagcgccccg gtcttcagcg catgcatgcg ggtgagggcc gccagcgtct
    11401 gctgttggcc ggtggcatcg atgtccaggg cctggccgcc gcacatgccg gcggcgccgg
    11461 aggcgtgggc cagggtctgc aggcaggcca cgcgcaacgt ggccggcagc ggcgcatcgg
    11521 ccagcaggcc gaaggcgcgg gcctgcaggg catcgccggc gaggatcgcc gtggcctcgt
    11581 cgaaggcgat atgggtggtc ggcttgccgc ggcgcagggc gtcatcgtcc atcgccggca
    11641 gatcgtcatg caccagtgaa taggcgtgga tcagttcgac cgccatcgcg gccgcgtcca
    11701 gcgcttccgg ctgcgcaccg aacaggtggc cgctggcgta caccagcatc gggcgcatgc
    11761 gcttgccgcc gcccagcacc gaatagcgca tggcctggtg caggccctgc ggtgcctcgg
    11821 caggcgaggg cagtgcggcg tcgagctggc tttcaatacg gtcgcgccag cgcgcgaaca
    11881 gggcctcagc cgtcatggct gggcgggtcg aacggctcgg ctgcttccgg ctgggccgga
    11941 tcgctgagca ggcgcacgcg cagttcagcc tgttccagcg cctgctggca ctggcggtac
    12001 aggccgacgc cacgttcgta tgcactgagc gaagcttcca ggctcagctc gccggtttcc
    12061 atctgctcca ccagctgctc cagcgactcg agcgactgct cgaactgggc gaccggggag
    12121 gcgttttcgg gggacttctt ggccatgcga caagtgtgga cgggccgcgc gcgggggtca
    12181 attcaccagc cgcccgggcg ccactgcagt tgcgccccat gggcctgcaa ccaggcctgc
    12241 aaaggtgctg cgatgaccac gtcggcggca gcaagcaact gcgggccatc gaagatcagc
    12301 ggtagctgcg cgcgtcgcca gggcgcgagg tgttcccgtt gcaggcagtc cttcagggca
    12361 tgcgaatgct ggcgtcctgg cagctggatg cgctcaccac ccacgcgtgc gcggacctgc
    12421 agcgcgtgtt cgaaggccgc ggcgccctgc aggcgcagct ggccgccatc gggcagcggc
    12481 aagggcgtgc gtccatccca ttcggcctgc cagtcgcgtg gcagcacggg aagcgccgcg
    12541 gggagcaggt acgcatggtc ccgccattgc tggatcgcat gatcgtgcca ccccacgcgc
    12601 gcctggcggt cgttgtcggc gggaagcagt tcggccagtg cctgctgcag gaccgtggcc
    12661 ggcaacggtg ccgcatcatg gcccagcacc caggcccgca gtacgcgtgc ggcgcggccg
    12721 ggtgaaatct gccgcagcag ctgcagcgac agcacgcgcg gtgccacctc cagatgcgcg
    12781 atcagctcgg cgtcttcttc atcaagcagt tcacgggtct gcccgcaatg cgcggcgctg
    12841 ccggccagcg ccgcggccgc atgtggccag cgctggcgca gcagcggcag cacctgcagg
    12901 cgcaggaaat tgcggtcagc atgatcgtcg ccattgctgg gatcttcgat ccagtgcagt
    12961 gcatgctggt gcgcgtagtc cagcagtgca tcgcgcggga cctgaagcaa tggtcgccac
    13021 agggcgtgtc caccaaagcg actgtgtacg gacatcgcag caaggccatc gacgccggaa
    13081 ccgcgcaggg cgcgcagcag gaaggtctcg gcctggtcgt cctggtgctg ggccagcgcc
    13141 agtgtttcgc cgtcgcgcaa ctcggcggcg aaggccgcgc gccgtgcctg ccgcgctgcg
    13201 ccttcgatgc ccaggcctgt gcccgtcgcg acccgcacat ggtgtacggc caggtcgatg
    13261 cccagcgctg tgcactgctg ccggcaatgc tgcacccagt cgtcggccgc ggactgcagg
    13321 ccatggtgca cgtgcaccgc acgcagcgga gtgccggagg cctgtgcgca gcggcacagc
    13381 cagtgcagca gcacggtcga gtcgacaccg ccgctgtagc cgaccagcag cggcacatcc
    13441 agcggaacga gggtagggaa ggcagtcacg gggcaagtat agggttgctc ggcagggctg
    13501 cgccctgcac ccgctacgat caagagcaac agcaacagca acggcaacag cagaagcaga
    13561 agcaggcttc ctgagggatg gcggggtggg tccggttgc
//
LOCUS       DAOKIP010000104        13436 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.104,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000104 DAOKIP010000000
VERSION     DAOKIP010000104.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 13436)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13436)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13436
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.104"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(101..1027)
                     /locus_tag="QEL58_002456"
     CDS             complement(101..1027)
                     /locus_tag="QEL58_002456"
                     /EC_number="6.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006448471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylaminoimidazolesuccinocarboxamide
                     synthase"
                     /protein_id="HDS1676916.1"
                     /translation="MPTTLLQSDLPGLPLRHRGKVRDVFDIPRERLPAGTPPGEYLLM
                     VATDRLSAFDVVLPDPIPGKGEMLCQVSNFWFAKTAHLMPNHLTGIEVASVLPEGVDP
                     ALYAKRAVVTRKLKPVPVEAIARGYLIGSGWKDYQRTGKVSGIDLPDGLRQAEQLPEP
                     IFPPSTKAAVGDHDENIDFDAMVKQVGADLAERVRDATLRIYKFAADYARERGIILAD
                     TKFEFGTDADGRLYIMDEMLTPDSSRYWPADEYEVGTSPPSYDKQFVRDYLETLDWGK
                     TAPGPSIPAGIIERTRAKYAEALQRLAGISVD"
     gene            1172..1501
                     /locus_tag="QEL58_002457"
     CDS             1172..1501
                     /locus_tag="QEL58_002457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006399039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaJ domain-containing protein"
                     /protein_id="HDS1676917.1"
                     /translation="MRWYGKLLGFIAGALLFRPNPLFGAVVGLLIGHAFDSDWFRLNK
                     ENPYRELGLTSEATDAEVERAYRKLISQYHPDKLGGAAPELQQQAEQKSRRINAAYDR
                     IKTLRKR"
     gene            1532..2206
                     /locus_tag="QEL58_002458"
     CDS             1532..2206
                     /locus_tag="QEL58_002458"
                     /EC_number="5.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010482664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HDS1676918.1"
                     /translation="MSNCLIAPSILSANFARLGEEVDNVLAAGADWVHFDVMDNHYVP
                     NLTIGPMVCQALRKHGVTAPIDVHLMVEPVDRIIPDFAEAGATYISFHPEASRHVHRT
                     IQLIRSLGCKPGIVLNPATPVDILDWVLDDLDLVLLMSVNPGFGGQAFIPSALDKLRV
                     VRKMIDASGKDIRLEIDGGVKADNIGEIAAAGADTFVAGSAIFNAKTSYQDVIAQMRA
                     NVAAAR"
     gene            2266..2748
                     /locus_tag="QEL58_002459"
     CDS             2266..2748
                     /locus_tag="QEL58_002459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012512318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDS1676919.1"
                     /translation="MALLNIRPATVADAGLILHFIRELAIYEKAEHSVQTDEIGIAES
                     LFGADATARALICEADGEAIGYAVYFYNYSTWLGRKGIYLEDLYVSQEKRGVGAGKAL
                     LKYIARQAVAEGCGRFEWSVLDWNTPAIEFYTAAGAKPQDEWTVYRLQGQALHDFANG
                     "
     gene            3041..3976
                     /gene="yegS"
                     /locus_tag="QEL58_002460"
     CDS             3041..3976
                     /gene="yegS"
                     /locus_tag="QEL58_002460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012512317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid kinase YegS"
                     /protein_id="HDS1676920.1"
                     /translation="MTIPRWRLILNGKSAGNDTLRDAVGHWRGQGVQLDVRVTWEEGD
                     AERYVAEAIDHGVDVIVAAGGDGTLSAVAETLAHREEPADALPSLALIPMGTANDFAT
                     SAGIPTEPKDAFALIGQARPHAIDLLRVDADGTPWWCANLASGGFGTQVTVETDAGLK
                     KMLGGLAYVITGIAKLGRIEPISARLSGPDFAWEGDFIALGIGNGRQAGGGQQLCPQA
                     LIDDGLLDVTVLPELEGEVTATLGQMLKSGTQAALEQLATRARLPWLQLASERPLTLN
                     LDGEPVQARQFRIECVPGRVRMHLPAGCPLLAGQG"
     gene            4282..5757
                     /locus_tag="QEL58_002461"
     CDS             4282..5757
                     /locus_tag="QEL58_002461"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008575582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate synthase component I"
                     /protein_id="HDS1676921.1"
                     /translation="MNSHAQFLQQAAEGHTHIPVVREVLSDLDTPLSVYLKLADGPNT
                     YLFESVEGGERFGRYSIIGLPARRVYAFHGHTLTVREDGQVVETREVADPFAEVEALR
                     SAHSVPKLDGLPGFTGGLVGWFGFECIGYIEPRLAPPAGRDELGTPDILLLDSNELAV
                     FDNLKGRLYLIVHADPRVDGAFEQAQARLDALTAKLRAPGAGYPAPLNSDVLDESDFV
                     SGFTREGFVDAVQRSKEYIRAGDIFQVVLSQRLSVPFKARPVDVYRALRALNPSPYMY
                     FLDVGDLQVVGSSPEILVRLQDGEVTVRPIAGTRPRGATVEQDLALEAELLADPKERA
                     EHLMLIDLGRNDAGRVSKAGTVEVGEQFVIERYSHVMHIVSEVTGQLQPGLSYADVLR
                     ATFPAGTVSGAPKIRALEVIRELEPIKRNVYAGSIGYIGWHGDADTAIAIRTAVIKDG
                     RLYVQAGAGIVYDSDPDKEWDETMNKGRALFRAVAQAAKGL"
     gene            5825..6595
                     /locus_tag="QEL58_002462"
     CDS             5825..6595
                     /locus_tag="QEL58_002462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014648669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIMPL domain-containing protein"
                     /protein_id="HDS1676922.1"
                     /translation="MKLLSALLWSSLLATMAPSAWAQANTIPSQPHLLVKGEARRVVM
                     PDRFGLQLNIEETDMDADAARRRVQDNVARVLALFKQYKAEEGSVRADNLRIGPATRY
                     EQSRQVFIGTRVGRQLRASFASVKAMQDVLGALKANENVQVSSVAPTYSGEVALRREL
                     KGEAAAQTRESAQGLAKAYGTKLRGLYSISDVAPNFAYGVQAGNWPRVDDTFAPPAPP
                     APQNSIEATGSSIRESIEAGPITYTENVYAIFLISDGT"
     gene            6598..7185
                     /locus_tag="QEL58_002463"
     CDS             6598..7185
                     /locus_tag="QEL58_002463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate/anthranilate synthase
                     component II"
                     /protein_id="HDS1676923.1"
                     /translation="MLWMIDNYDSFTYNLVQYLQTLGAEVKVVRNDAMSVDEIAAQKP
                     ERIVISPGPCTPNEAGVSLALIERLGPTTPILGVCLGHQGIGQVYGGTVIRAGNIMHG
                     KTSPIRHQGKGVFAGLPDRYQATRYHSLVVDKNSLPDVLEVTAWTENEDGSIEEIMGL
                     RHRQFPVEGVQFHPESILTEHGHALLRNFLQRPAA"
     gene            7202..8233
                     /gene="trpD"
                     /locus_tag="QEL58_002464"
     CDS             7202..8233
                     /gene="trpD"
                     /locus_tag="QEL58_002464"
                     /EC_number="2.4.2.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006399001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate phosphoribosyltransferase"
                     /protein_id="HDS1676924.1"
                     /translation="MSFSPQEALQRTIEHREIFFDEMVDLMRQIMRGDVSPMMTAAIL
                     TGLRVKKETIDEIAAAATVMREFALAVPVADPTHLVDIVGTGGDGSHTFNISTCAMFV
                     AAAAGARVAKHGNRSVSSKSGSADAVEALGAAIELQPAQVAAAIEQTGIGFMFAPIHH
                     PSMKVVAPVRREMGVRTIFNILGPLTNPASAPSVLMGVFHPDLVGIQARVLRELGTER
                     AMVVWGRDNMDEISLGAGTLVGELRDGKVREYEIHPEDFGIAMSASRNLRVDSPEQSI
                     AMLRAVLDNTPGPALDIVALNAGAALYVAGVASDIGDGLARARAAIANGSARQRLQQY
                     VDTTRALVA"
     gene            8308..9102
                     /gene="trpC"
                     /locus_tag="QEL58_002465"
     CDS             8308..9102
                     /gene="trpC"
                     /locus_tag="QEL58_002465"
                     /EC_number="4.1.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012481437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="indole-3-glycerol phosphate synthase TrpC"
                     /protein_id="HDS1676925.1"
                     /translation="MSDILQTILARKAEEVAQRRAQRPLEELQAALASAPPVRGFVRA
                     LQAAVANGDPAVIAEVKKASPSKGVIRPDFRPADIAVSYEFGGASCLSVLTDVDFFQG
                     ADAYLQQAREACTLPVLRKDFVIDAYQVYEARVLGADCILLIVAALDDTQLATLSELA
                     LSLGMDVLVEVHDIDELERALQVPAPMIGINNRNLRTFEVSLQTTLDMQNAVPRDRLL
                     VTESGILGPQDVALMRDAGIHAFLVGEAFMRVEEPGEGLRQLFFAA"
     gene            9099..9767
                     /locus_tag="QEL58_002466"
                     /pseudo
     CDS             9099..9767
                     /locus_tag="QEL58_002466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002808250.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="haloacid dehalogenase-like hydrolase"
     gene            complement(9812..10573)
                     /locus_tag="QEL58_002467"
     CDS             complement(9812..10573)
                     /locus_tag="QEL58_002467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012512310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HDS1676926.1"
                     /translation="MELSSAFWWFILIGLGAQLVDGALGMAFGLVSSSVMLAMGIPPA
                     QASAAIHTAEVFTTGASGVSHLVAGNVDKRLFLRLALPGAVGGAVGAYGLTQLPGEVI
                     RPLIYLYLLVLAIIILARAAGRLMPKGEVKRVPVLGFVAGFLDASGGGGWGPVATSTL
                     LARGGQARTTIGTVNAAEFVVTLTVSATFLLSMGLHHLQIVAGLLIGGMMAAPVAALL
                     VKRLKERWVLVAVGVLVLGISLFQIGHALSGYLAR"
     gene            complement(10635..11324)
                     /gene="crp"
                     /locus_tag="QEL58_002468"
     CDS             complement(10635..11324)
                     /gene="crp"
                     /locus_tag="QEL58_002468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010368067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cAMP-activated global transcriptional regulator
                     CRP"
                     /protein_id="HDS1676927.1"
                     /translation="MRRGSAPIVSTVRLASSPLALDIATIDRFLAHSHRRRYPTRTDV
                     FRPGDPAGTLYYVISGSVSIMAEEDDDRELVLGYFGAGEFVGEMGLFVESDRREVILR
                     TRTACELAEISYERLHQLFLGPLSADAPRLLYALGQQISKRLLDTSRKASRLAFLDVT
                     DRIVRTLHDLAQEPEAMSHPQGSQLRVSRQELARLVGCSREMAGRVLKKLQTDGLLHA
                     RGKTVVLYGTR"
     gene            11474..12268
                     /gene="speD"
                     /locus_tag="QEL58_002469"
     CDS             11474..12268
                     /gene="speD"
                     /locus_tag="QEL58_002469"
                     /EC_number="4.1.1.50"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005411315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylmethionine decarboxylase"
                     /protein_id="HDS1676928.1"
                     /translation="MVKPLPRLRLQGFNNLTKALSFNIYDVCYARTEEERQRYIEYID
                     EEYNADRLTQILTDVAEIIGANILNVARQDYDPQGASVTILISEEPVIDKKQAGKELI
                     SDAVVAHMDKSHITVHTYPETHPQEGIATFRADIDVATCGVISPLKALNYLIESLESD
                     IVIMDYRVRGFTRDVKGKKHYIDHKINSIQNFLAKNIKSRYEMFDVNVYQENIFHTKM
                     HLKDFDLDQYLFEEKAKNLSFKERMKIEALLKREIEELFHGRNLSE"
     gene            12438..12758
                     /gene="sugE"
                     /locus_tag="QEL58_002470"
     CDS             12438..12758
                     /gene="sugE"
                     /locus_tag="QEL58_002470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005411314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quaternary ammonium compound efflux SMR
                     transporter SugE"
                     /protein_id="HDS1676929.1"
                     /translation="MPWIYLLLAGLFEIGFALGMKYSEGFSKPLPTAATVVSALISLY
                     LMSQAMKSIPVGTAYAIWTGIGAMGVAVLGIYLFNDSASPARLACVGLIVAGVIGLKL
                     VSPN"
     gene            complement(12845..>13436)
                     /gene="coq7"
                     /locus_tag="QEL58_002471"
     CDS             complement(12845..>13436)
                     /gene="coq7"
                     /locus_tag="QEL58_002471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003483072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinone
                     monooxygenase"
                     /protein_id="HDS1676930.1"
                     /translation="RALDTVFGNPPAARPYPAADTDEPGMDSTERRHAAGLMRINHVG
                     EVCAQGLYFGQAAVARDPATREHLLEAAQEETDHLAWCATRLGELDSRPSLFNPLWYA
                     GSYTIGTLAGLRGDGWNLGFVVETERQVEAHLDEHLVDLPAGDLRSRAVIQVMKDDEA
                     RHAEHAEQAGARRLPFPIPGAMALASRVMKTIAYRI"
BASE COUNT         2300 a         4526 c         4439 g         2171 t
ORIGIN      
        1 aggccatgcc tggctgcagg cttgcgaggt tgccggccag cggccggccc taccgcattc
       61 agaacgcccc ccggcctttc cggccggggg cgcaggggga tcagtcgacg ctgatcccgg
      121 ccaggcgctg cagcgcctcg gcgtacttgg cgcgggtgcg ctcgatgatc ccggccggga
      181 tgctcgggcc cggggcggtc ttgccccagt ccagcgtctc caggtaatcg cgcacgaact
      241 gcttgtcgta gctcggcggg ctggtgccca cttcgtactc gtcggccggc cagtaacgcg
      301 aggaatccgg ggtcagcatc tcgtccatga tgtacaggcg gccatcggca tcggtgccga
      361 actcgaactt ggtgtcggcc aggatgatgc cgcgctcgcg ggcgtaatcg gcggcgaact
      421 tgtagatgcg cagggtggca tcacgcacgc gctcggccag gtccgcaccc acctgtttca
      481 ccatcgcatc gaaatcgatg ttctcgtcat ggtcgccgac ggcggccttg gtcgaggggg
      541 ggaagatcgg ctcgggcagc tgctcggcct ggcgcaggcc gtcgggcagg tcgatgccgc
      601 tgaccttgcc ggtgcgctgg tagtccttcc agccgctgcc gatcaggtag ccgcgggcga
      661 tggcttccac cggcaccggc ttcagcttgc gggtgaccac cgcgcgcttg gcatacaggg
      721 ccgggtccac gccctcgggc agcacgctgg ccacctcgat gccggtcagg tggttgggca
      781 tcaggtgcgc ggtcttggcg aaccagaagt tggagacctg gcagagcatc tcgcccttgc
      841 ccgggatcgg gtcgggcagc accacgtcga acgccgacag gcgatcggtg gccaccatca
      901 gcaggtactc gcccggcggg gttccggctg gcagccgctc gcgcgggata tcgaacacat
      961 cacgcacctt gccgcgatgg cgcaagggca ggccggggag atcggattgc aacagcgtgg
     1021 ttggcacggg cactcctggg gcgttgtcga tacggctgct gcccaacgga cccggcgggc
     1081 ccgctgacca gcgggcggcc tagtgtaaag cggtccgggc ccgctgtgac gtaaaatgag
     1141 cgtccatttc gtcggtcgac cccggagcgc catgcgctgg tacggaaaac tgctcggatt
     1201 catcgccggc gccctgctgt tccggcccaa tccgctgttt ggcgcggtgg tcggcctgtt
     1261 gatcggccac gccttcgatt cggactggtt ccgcctgaac aaggagaacc cgtaccggga
     1321 gctggggctg acctcggagg ccaccgatgc cgaggtcgag cgcgcctatc gcaagctgat
     1381 ctcccagtac caccccgaca agcttggcgg cgccgccccc gagctgcagc agcaggccga
     1441 gcagaagtcg cggcggatca atgccgcgta cgaccgcatc aagaccctgc gcaagcgctg
     1501 accctctttc ccctcgttgc aaggcccggc catgtccaac tgcctcattg ccccgtccat
     1561 cctgtccgcc aacttcgctc gcctcggcga ggaagtcgac aacgtcctcg ccgccggcgc
     1621 cgactgggtc cacttcgacg tgatggacaa ccactacgtg ccgaacctga ccatcggccc
     1681 gatggtctgc caggccctgc gcaagcacgg cgtgaccgcg ccgatcgacg tgcacctgat
     1741 ggtcgagccg gtggaccgca tcattccgga tttcgccgag gccggtgcca cctacatcag
     1801 cttccacccg gaggccagcc gccacgtgca tcgcaccatc cagctgatcc gctcgctggg
     1861 ctgcaagccg ggcatcgtgc tcaatccggc cacgccggtg gacatcctcg actgggtgct
     1921 ggatgacctg gacctggtgc tgctgatgtc ggtcaacccg ggcttcggcg gccaggcctt
     1981 catcccctcg gcgctggaca agctgcgcgt ggtgcgcaag atgatcgatg ccagtggcaa
     2041 ggacatccgc ctggagatcg acggcggcgt gaaggccgac aacatcggcg agatcgccgc
     2101 cgccggcgcc gacaccttcg tcgccggttc ggccatcttc aatgccaaga ccagttacca
     2161 ggatgtgatc gcgcagatgc gcgcgaatgt cgctgcagcg cgctgacaaa aaggggacgg
     2221 aggggattaa gctcgcttaa ttccctccgt cccctttttc cgctcatggc actgttgaac
     2281 atccgcccgg ccaccgtggc cgatgccggc ctgatcctgc atttcatccg cgaactggcg
     2341 atctacgaga aggccgagca ttcggtgcag accgatgaga tcggcatcgc cgagagcctg
     2401 ttcggtgccg acgctacggc acgcgcgctg atctgcgaag ccgacggcga agcgatcggc
     2461 tacgcggtgt atttctacaa ttactccacc tggctgggcc gcaagggcat ctacctggaa
     2521 gacctgtacg tcagccagga aaagcgcggc gtcggcgccg gcaaggcgct gctgaagtac
     2581 atcgcgcgcc aggcggtggc cgaaggctgc gggcgcttcg aatggtcggt gctggactgg
     2641 aacaccccgg ccatcgagtt ctataccgct gccggcgcca agccacagga cgagtggacc
     2701 gtgtaccggc tgcagggcca ggcgctgcac gatttcgcca acggttgagg cttgtggggg
     2761 caaaccccag ttgggtgggc gcggacccca gttgggtggg tgcgaaccgc aacccggtgg
     2821 gtgcgaacct tggttcgcac tccctgtgaa ctccaaaaaa aaaagaccac gccaatcact
     2881 ggcgtggccc tgctgcatgc gtgggaggct gatcctgcct ccatccatcg tccctgctat
     2941 ggccttccat tctccggtag ctgaatgaca tctgcgtgac attcactggg gacaaacagc
     3001 gcattgctag cctgtgccac ccccgcaccg gaagcactgc atgaccatcc cgcgctggcg
     3061 cctgatcctc aacggaaaat ccgcgggcaa cgacacgctg cgcgacgccg tcggccattg
     3121 gcgcggacag ggcgtgcagc tggacgtgcg ggtgacctgg gaagaggggg atgccgaacg
     3181 ctacgtggcc gaagcgatcg accacggcgt ggatgtgatc gttgccgccg gtggcgacgg
     3241 cacgctcagc gcggtggcgg aaacgctggc gcatcgtgag gaacctgccg atgcgctgcc
     3301 atcgctggcg ctgattccga tggggactgc caacgatttc gccacctcgg ccggaatccc
     3361 gaccgaaccg aaggacgcct tcgcgctgat cgggcaggcg cggccgcacg ccatcgatct
     3421 gctgcgcgtg gacgccgatg gcacgccctg gtggtgcgcc aatctcgcca gcgggggctt
     3481 cggtacgcag gtcaccgtgg agaccgatgc tggcctgaag aagatgctgg gtgggctggc
     3541 ctatgtgatc accggcatcg ccaagctcgg gcggatcgag ccgatcagtg cgcgcctgtc
     3601 gggccccgat ttcgcctggg aaggcgattt catcgcactg ggcattggca acggtcgcca
     3661 ggccggtggc ggccagcagc tgtgcccgca ggcactgatc gacgacgggt tgctggatgt
     3721 gacggtactg ccggagctgg aaggcgaggt gaccgccacg ctgggccaga tgctgaagtc
     3781 gggcacccag gccgcgctgg aacagctggc cacgcgcgcg cggctgccgt ggctgcagct
     3841 cgcatccgag cgtccgctga cgctcaacct ggacggtgaa ccggtgcagg cccgccagtt
     3901 ccgcatcgag tgcgtgccgg gcagggtgcg gatgcatctg ccggccggct gcccgttgct
     3961 ggccgggcag ggctagagcc ggcgggtaga gtcgactgtt agtcgacttg cgcgcgcagc
     4021 gcgggttctt acgccgtcgg aacgaagagc agtcggctga cagtcgacgc taacggtcgc
     4081 cgttgctggt ccccgtgaac ggccccgggc gtcgcgcggt tcagtttcac agggttcccc
     4141 tcccgccttt gctgcgatac agtcagcggg tgtccagcct gacgaccccg catacccttt
     4201 cttccgcacg ccgttggtgg cgatggtggc ccgttgccgt cgtccgcccc cataacgctg
     4261 tgtcccggaa ggaaagtcgt cttgaactcg cacgcccagt ttctgcagca ggccgctgaa
     4321 ggccacaccc acattcccgt tgtccgcgaa gtgctgtccg acctggacac gccgctttcg
     4381 gtctatctga agctcgccga cggccccaat acctacctgt ttgaatccgt cgaaggcggc
     4441 gagcgctttg gtcgttactc gatcatcggc ctgccggcgc gccgcgtgta cgccttccac
     4501 ggccacacgc tgaccgtgcg cgaggacggc caggtggtgg aaacccgcga agtggccgac
     4561 ccgttcgccg aggtcgaggc gctgcgcagc gcccactcgg tgcccaagct ggacggcctg
     4621 ccgggcttca ccggtggcct ggtcggctgg ttcggcttcg agtgcatcgg ctacatcgaa
     4681 ccgcgcctgg caccgccggc cggccgcgat gaactgggta ccccggacat cctgctgctc
     4741 gattccaatg agctggcggt gttcgacaac ctcaagggcc gcctgtacct gatcgtgcat
     4801 gccgacccgc gtgtcgacgg cgccttcgag caggcccagg cccgtttgga tgcactgacc
     4861 gccaagctgc gcgcgccggg agcgggctat ccggcgccgc tcaacagcga cgtgctggac
     4921 gaatccgatt tcgtctccgg gttcacccgc gaaggcttcg tcgatgcggt ccagcgcagc
     4981 aaggaataca tccgcgccgg cgacatcttc caggtagtgc tcagtcagcg cctgagcgtg
     5041 ccgttcaagg cgcgcccggt ggatgtgtac cgcgcgctgc gtgcactgaa tccttcgccg
     5101 tacatgtact tcctggatgt cggcgacctg caggtggtcg gttcctcgcc ggaaatcctg
     5161 gtacgcctgc aggacggcga agtcaccgtg cgtccgatcg ccggtacccg tccgcgcggc
     5221 gccaccgtcg agcaggacct ggcgctggaa gccgagctgc tggccgatcc gaaggagcgc
     5281 gccgagcacc tgatgctgat cgacctcggc cgcaacgacg ccggccgcgt ctccaaggcc
     5341 ggtaccgtgg aagtgggcga gcagttcgtg atcgaacgct acagccacgt catgcacatc
     5401 gtcagcgaag tgaccgggca gctgcagccg ggcctgagct atgccgacgt gctgcgtgcc
     5461 accttcccgg ccggtacggt cagcggcgcg ccgaagatcc gtgcgctgga agtgatccgc
     5521 gagctggaac cgatcaagcg caatgtctac gccggcagca tcggctacat cggctggcac
     5581 ggtgatgcag ataccgcgat cgcgatccgc accgcggtga tcaaggacgg ccgcctgtac
     5641 gtgcaggccg gcgccggcat cgtctacgac tcggacccgg acaaggaatg ggacgagacg
     5701 atgaacaagg gccgcgcgct gttccgcgcc gtcgcccagg ctgccaaggg cctgtaagcc
     5761 ttcccgtgcc atggcctgcg ccgcggcacc ttccgctgtt cccattcagg acaaggagta
     5821 ccgcatgaag ctgctgagcg cattgctgtg gtcgtcactg ctggccacga tggccccgtc
     5881 tgcgtgggcg caggccaaca ccattccctc gcagccgcac ctgctggtga agggtgaggc
     5941 gcgtcgcgtg gtgatgccgg accggttcgg cctgcagctg aacatcgaag agaccgacat
     6001 ggatgccgat gccgcgcggc gccgcgtgca ggacaacgtt gcccgcgtgc tggcgctgtt
     6061 caagcagtac aaggcggagg aaggcagcgt gcgtgcggac aacctgcgca ttggtcctgc
     6121 aacgcgctat gagcagagcc ggcaggtctt catcggtacc cgcgtagggc gccagctgcg
     6181 tgccagcttc gccagcgtga aggcgatgca ggacgtgctg ggtgcgctga aggccaatga
     6241 gaacgtgcag gtcagcagcg tggctccaac ctattcgggc gaagtggcgc tgcgacgcga
     6301 actcaagggc gaggcggcgg cacagacgcg cgagtccgcg cagggcctgg ccaaggctta
     6361 cggcacgaag ctgcgcggcc tgtacagcat ctccgatgtg gcgccgaact ttgcctatgg
     6421 cgtgcaggcg gggaattggc ctcgcgtcga cgacacgttc gcgccgcccg cgccgcccgc
     6481 gccgcagaac agcatcgagg ctaccggttc gagcatacgc gagtcgatcg aagccggccc
     6541 catcacctac accgaaaacg tgtacgccat tttcctgata agcgacggaa cctgaccatg
     6601 ttgtggatga tcgacaacta cgacagcttc acctacaacc tcgtgcagta cctgcagacg
     6661 cttggcgccg aggtgaaggt ggtgcgcaac gatgcgatga gcgtggacga gattgccgcg
     6721 cagaaacccg agcgcatcgt catctcgccc ggcccgtgca cgcccaacga agcgggcgtg
     6781 tcgctggcac tgatcgagcg cctgggcccg accacgccga tcctcggcgt gtgcctgggc
     6841 caccagggca tcggccaggt ctacggcggc acggtcatcc gcgccggcaa catcatgcac
     6901 ggcaagacct cgccgatccg ccaccaaggc aagggcgtgt tcgccggcct gccggaccgc
     6961 taccaggcca cccgctacca ctcgctggtg gtggacaaga acagcctgcc cgatgtgctg
     7021 gaagtgaccg cctggaccga gaacgaggac ggctcgatcg aagagatcat gggcctgcgc
     7081 caccgccagt tcccggtgga aggcgtgcag ttccatcccg aatccatcct caccgaacac
     7141 ggccacgccc tgctgcgcaa tttcctgcag cgcccggcgg cctgatccaa ggagcattcc
     7201 catgagcttc tccccccagg aagccctgca gcgcaccatc gaacatcgcg aaatcttctt
     7261 cgacgaaatg gtcgacctga tgcggcagat catgcgcggc gacgtctcgc caatgatgac
     7321 tgccgccatc ctcaccggcc tgcgggtgaa gaaggaaacc atcgacgaga tcgccgcagc
     7381 ggccaccgtg atgcgcgagt tcgcgctggc ggtaccggtg gccgatccca cccacctggt
     7441 cgatatcgtc ggcaccggtg gcgatggctc gcacaccttc aacatctcca cctgcgcgat
     7501 gttcgtcgcc gccgccgccg gtgcgcgcgt ggccaagcac ggcaaccgca gcgtgtcgtc
     7561 caaatccggc agcgccgatg cggtggaagc gctgggcgcg gccatcgaac tgcagccggc
     7621 ccaggtggcc gctgcgatcg aacagaccgg catcggcttc atgttcgcgc cgatccatca
     7681 tccgtcgatg aaggtagtgg cgccggtacg ccgcgagatg ggcgtgcgca ccatcttcaa
     7741 catcctcggc ccgctgacca acccggccag cgcaccgtcg gtgctgatgg gcgtgttcca
     7801 tcccgatctg gtcggcatcc aggcgcgcgt gctgcgcgag ctgggcaccg agcgcgcgat
     7861 ggtggtctgg ggccgcgaca acatggacga gatctcgctg ggtgccggca ccctggtcgg
     7921 cgagctgcgc gatggcaagg tgcgcgagta cgagatccac cctgaggact ttggcattgc
     7981 catgtcggcc agccgcaacc tgcgcgtgga cagcccggag cagtccatcg cgatgctgcg
     8041 cgcggtgctg gacaacaccc cgggcccggc actggacatc gttgccctga acgccggtgc
     8101 cgccctgtac gtggccggcg tggccagcga catcggcgac ggcctggccc gcgcccgtgc
     8161 cgccatcgcc aacggcagcg cccgccagcg cctgcagcag tacgttgaca ccacccgcgc
     8221 gctggttgcc tgagtgcgcg gttcagcctg acccacccga tggccgataa tggccgtcct
     8281 caccgccccc gcattgaacc gacgacgatg agcgacatcc tgcagacgat cctggcccgc
     8341 aaggccgaag aagtggccca acgccgcgcc cagcgcccgc tcgaggagct gcaggccgcc
     8401 ctggccagcg ccccgccggt acgtggcttc gtgcgcgcgc tgcaggctgc ggtggccaac
     8461 ggcgacccgg cggtgatcgc cgaggtgaag aaggccagcc cgtccaaggg cgtgatccgc
     8521 ccggacttcc gcccggccga catcgccgtc agctacgagt tcggtggcgc cagctgcctg
     8581 tcggtgctga ccgacgtgga cttcttccag ggcgccgacg cctacctgca gcaggctcgc
     8641 gaggcctgca cgctgccggt gctgcgcaag gacttcgtga tcgacgccta ccaggtgtac
     8701 gaggcacgcg tgctgggcgc cgactgcatc ctgctgatcg ttgccgcgct ggacgacacc
     8761 cagctggcca ccctgtccga actggcgctg tcgctgggca tggacgtgct ggtggaagtg
     8821 cacgacatcg acgaactgga gcgcgcgctg caggtgccgg cgccgatgat cggcatcaac
     8881 aaccgcaacc tgcgcacctt cgaggtctcg ctgcagacca cgctggacat gcagaacgcc
     8941 gtgccgcgcg accgcctgct ggtgaccgag agcggcatcc tcggcccgca ggacgtggcg
     9001 ctgatgcgtg acgccggcat ccacgcgttc ctggtcggcg aggccttcat gcgcgtggaa
     9061 gagccgggcg agggcctgcg tcagctattc ttcgcggcat gacaacgcac tatccaacgc
     9121 cgcgcgggga tgcgccgctg gtggtcttcg acttcgacca caccctctac gacggcgatt
     9181 cgggcaccca cctgttcgcc tcgctgatca agcgcaatcc gctgcgcatg ctggccgcgc
     9241 tgctggtcac gccgatcgcc gggccgatgg tggcgatgct gccgacccgt cgtgccggca
     9301 tttcggtcta tgtgtggatc ggcagtttcg gcctgcaccg ggcgcgcgac ttcaacaagg
     9361 tgattgacgc ctacgtgctg cgcaatgagg cgcagatgcg cgccaagctg ttgccgcagg
     9421 cgctggaggt atttgccgcg caccgcgcca agggcgaccg cgtggtggtt gccacgggtg
     9481 cgccacccga gctggcgcgc gcgatcctgg cctttgtcgc ccaccaggac gtgccggtga
     9541 tcggcaccga ggtcggcccg cgactgggcg gggtcggccc gacccggcac tgccacaacg
     9601 aagagaagat gcgcatgctg cgcgagcgcg gctacggcga catcgacatt gcctattccg
     9661 acagtactgc cgacctgccg ctgttgctgg ccgccagggc gccggtggtg gtgaacccga
     9721 agccgggcaa ggtggacttc ttccgccgcg tgctgccggc cggcactacc gaacgccgtg
     9781 catgcatcgc agggccatgc ccggcgagcg ctcagcgcgc caggtacccg ctcagcgcgt
     9841 ggccgatctg gaacaggctg atgccaagca ccagcacgcc gacggccacc agcacccagc
     9901 gctccttcag ccgcttgacc agcagcgccg ccaccggggc ggccatcatg ccgccgatca
     9961 gcaggccggc cacgatctgc aggtgatgca gccccatcga cagcaggaac gttgctgaaa
    10021 ccgtcagggt gaccacgaac tcggcggcgt ttacggtgcc gatggtggtg cgcgcctggc
    10081 cgccgcgggc gagcagggtg gaggtggcca ccggccccca gccgccaccg ccgctggcat
    10141 ccaggaagcc ggccacgaag cccagcacgg gtacccgctt gacctcgccc ttgggcatca
    10201 ggcggccggc ggcgcgggcc aggatgatga tggccagcac cagcaggtag agatagatga
    10261 gcgggcggat cacctcgccg ggcagctggg tcagcccgta ggcaccgact gcgccgccta
    10321 ccgcgccggg cagggcgagg cgcaggaaca agcgcttatc gacattgccg gcgaccagat
    10381 gcgacacacc ggaggcgcca gtggtgaaca cctcggcggt gtggatggcg gcgctggcct
    10441 gcgcgggcgg gatgcccatg gccagcatca ccgacgacga caccaggccg aacgccatgc
    10501 ccagcgcgcc gtcgaccagc tgggcgccga ggccgatgag gatgaaccac cagaatgcgc
    10561 tgctcagttc catgcaccga gcctaacgcg cgaaggagtg cggaccaagg tccgcaccac
    10621 cgggtgctca acggtcaacg ggtgccgtac agcaccacgg tcttgccgcg tgcgtgcagc
    10681 aggccgtcgg tctgcagctt cttcagcacg cggccggcca tttcgcgcga gcagccgacc
    10741 aggcgggcca gttcctggcg cgagacgcgc agctggctgc cctgcggatg gctcatcgcc
    10801 tccggctcct gcgccaggtc gtgcagggtg cgcacgatcc ggtcggtaac gtccaggaac
    10861 gccaggcggc tggccttgcg gctggtgtcg agcaggcgct tggagatctg ctggcccagc
    10921 gcatacagca ggcgcggggc gtcggccgac agcgggccga ggaacagctg gtgcaggcgt
    10981 tcgtagctga tctcggccag ttcgcaggcg gtacgggtcc gcaggatcac ctcgcggcgg
    11041 tctgattcga cgaacaggcc catctcgccc acgaactcgc cggcaccgaa gtagcccagc
    11101 acaagctcgc gatcgtcatc ttcctcggcc atgatcgaaa ccgagccgct gatgacgtaa
    11161 tacagggttc ccgccgggtc accgggtcgg aagacgtcgg tacgggtggg atatcgccgc
    11221 ctgtggctgt gcgccaggaa acgatcgatg gtggcgatat ccagggccag tggactgcta
    11281 gctaggcgca cggttgacac gataggggcg ctccctctgc gcatgaacgg attcacgggg
    11341 tcgatagcgg agcttaacca gcgcaattgt taagggcaaa cagtgtgcca gaactcttgc
    11401 gtcttcacgt tccccccggg ggcagtttgc cccataattc cccctttccc ttcttacaca
    11461 ggaatcgacc gccgtggtca agccgttgcc tcgcctgagg ctgcagggtt tcaacaacct
    11521 caccaaggcg ctgagcttca acatctatga cgtgtgttac gcgcgcaccg aagaggagcg
    11581 tcagcgttac attgaataca tcgatgaaga gtacaacgcc gacaggctga ctcaaatctt
    11641 gaccgatgtc gccgagatca tcggcgccaa catcctgaac gtggcccgcc aggactacga
    11701 cccgcagggt gcctcggtga ccatcctgat ctccgaagag ccggtgatcg acaagaagca
    11761 ggccggcaag gagctgatct ccgacgccgt ggtcgcgcac atggacaaga gccacatcac
    11821 cgtccatacc tacccggaaa cccatccgca ggaaggtatc gcgacgttcc gcgcggacat
    11881 cgacgtggcc acctgtggcg tcatttcccc gctgaaggcc ctgaactacc tgatcgaaag
    11941 ccttgagtcg gacatcgtga tcatggacta ccgcgtccgt ggcttcaccc gcgatgtgaa
    12001 gggcaagaag cactacatcg accacaagat caactcgatc cagaacttcc tggccaagaa
    12061 catcaagtcg cgctacgaga tgttcgacgt caacgtctac caggaaaaca tcttccacac
    12121 caagatgcac ctgaaggact tcgacctgga ccagtacctg ttcgaggaaa aggccaagaa
    12181 cctgtcgttc aaggaacgca tgaagatcga agcgctgctc aagcgcgaga tcgaagagct
    12241 gttccacggc cgcaacctgt ccgagtaagc cccacgcgcg atgcccgcag gcatcgccac
    12301 ccaggcggga cgacccgccc tgtggaaccc ctgtactgcg caagcgtcat ggctccacgg
    12361 tgatgtaccg acccacggcc cggtgtgaaa acaccgggcc gtttcgtttt ttcaaaaaag
    12421 gtaaggagcc cccacccatg ccctggatct acctgctgct ggccggcctg ttcgagatcg
    12481 gtttcgccct tggaatgaag tactccgaag gtttcagcaa acccctgccc accgctgcca
    12541 cggtggtgtc ggcgctgatc agcctgtacc tgatgagcca ggcgatgaag agcatcccgg
    12601 tcggcacggc ctacgcgatc tggaccggta tcggcgccat gggcgtggcg gtgctgggca
    12661 tctacctgtt caacgacagc gcatcgccgg cccgcctggc ctgcgtcggc ctgatcgtgg
    12721 ccggggtgat cggcctgaag ctggtctcgc ccaactgaaa ggcggcccga ccaacggtcg
    12781 ggccccacca tcgggcccca ccgtgccatt gggtaggccc ccaccgttgg tgggggtgcc
    12841 ccgttcaaat gcggtacgcg atggtcttca tcaccctgga ggccagcgcc attgcccccg
    12901 gaatcgggaa cggcaggcgg cgggcgccgg cctgttcggc gtgttccgca tggcgggcct
    12961 cgtcgtcctt catcacctgg atgaccgcac ggctgcgcag gtcaccggcc ggcagatcga
    13021 ccagatgctc gtccagatgg gcctccacct ggcgctcggt ttcgaccacg aagcccaggt
    13081 tccagccgtc gccgcgcagc ccggccaggg tgccgatggt gtagctgccg gcgtaccaca
    13141 gcgggttgaa caggctggga cggctgtcca gctcgcccag ccgggtggcg caccaggcca
    13201 ggtggtcggt ctcttcctgg gcggcttcca gcaggtgttc acgcgtggcc gggtcgcggg
    13261 ccaccgccgc ctggccgaaa tacaggccct gcgcgcagac ctcgccgacg tggttgatcc
    13321 gcatcaggcc cgccgcgtgg cggcgctcgg tgctgtccat gcccggctcg tcggtatccg
    13381 cggccgggta ggggcgggcc gccggcgggt tgccgaacac cgtgtccagg gcgcgc
//
LOCUS       DAOKIP010000105        13391 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.105,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000105 DAOKIP010000000
VERSION     DAOKIP010000105.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 13391)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13391)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13391
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.105"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(3..740)
                     /locus_tag="QEL58_002472"
     CDS             complement(3..740)
                     /locus_tag="QEL58_002472"
                     /EC_number="2.1.1.193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (uracil(1498)-N(3))-methyltransferase"
                     /protein_id="HDS1676931.1"
                     /translation="MRVTRCPIDLALHSGQTLALPEETANHLVRVMRLREGDTCVLFN
                     GDGHDYSATLTVAGKREVQVRIDAVDRVDNESPLAITLLQGIARGEKMDLILQKATEL
                     GVAAIIPVNAERTEVKLDAARAEKRVAHWNNVVTSACGQSGRARIPPVGPPLSLAQAA
                     AALPADTLRLTLDPQGAHRLSTLDAAPAGGIVIAIGPEGGWSPRDRDQLAAAGFQGLQ
                     LGPRILRTETAGLAAIAALQAQLGDLG"
     gene            complement(731..2155)
                     /locus_tag="QEL58_002473"
     CDS             complement(731..2155)
                     /locus_tag="QEL58_002473"
                     /EC_number="2.6.1.62"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012481041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylmethionine--8-amino-7-oxononanoate
                     transaminase"
                     /protein_id="HDS1676932.1"
                     /translation="MCRQQHVHEPEMLADPTPSPLARQWRQRDLQVLWHPCTQMREHP
                     HTLPLVPIARGEGAWLIDHDGNRYLDAVSSWWTNLFGHAEPRIGGAIAAQAGQLEQVM
                     LAGFGHEPAIILAERLLALAPRQPGREPLAKVFYADNGSAGVEVALKMAFQYFQNRGE
                     SRRTRFISLENGYHGETLGALALGDIPLYRRVYAPLLAEGLFAPSPDAYLAEPGQNPA
                     DRARQAADGLATLFDQHPGEICAVILEPRLQCAGGMRMHDPVYLQRVRELCDAHGAFM
                     IADEIATGFGRTGTLFACEQAGVMPDLMCLSKGLTGGFLPLAAVLATQALYDAFLDDS
                     RERAFLHSHSYTGNPLACAAALATLDIFRDDDVIARNRGIASVMGTLAAPFADHPHVA
                     DVRQAGMVVAFELSRGGNRQTPFDPGLRLGLHAYKAALKRGVVLRPLGDVLYWMPPYC
                     VDDEQLELLAHTTLAAIDEAIACA"
     gene            2200..2763
                     /gene="nudE"
                     /locus_tag="QEL58_002474"
     CDS             2200..2763
                     /gene="nudE"
                     /locus_tag="QEL58_002474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005414246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP compounds hydrolase NudE"
                     /protein_id="HDS1676933.1"
                     /translation="MNDDRAGRRLPIIHRITDEENGPFQRQHLDLEFSNGEHRRFERL
                     VSRGHGAVVVVPMLDEETVLLVREYAAGMHRYELGLVKGRIDAGETPEQAADRELKEE
                     AGYGARRVDVLRAMTLAPTYMSHQSWLVVARDLYPEKLPGDEPEELEVVPWKLAELDQ
                     LMLREDFSEGRSLAALFIARQWLQGAR"
     gene            2760..3563
                     /gene="cysQ"
                     /locus_tag="QEL58_002475"
     CDS             2760..3563
                     /gene="cysQ"
                     /locus_tag="QEL58_002475"
                     /EC_number="3.1.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008268136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'(2'),5'-bisphosphate nucleotidase CysQ"
                     /protein_id="HDS1676934.1"
                     /translation="MIKLTTDLRETAIAIAQEAGQAIMQVYAGGFDVRIKDDNSPVTA
                     ADLAANQVIEQGLQQLTPELPVLSEESAQVPWEQRRHWGAYWLVDPLDGTREFVKRNG
                     EFSVNIALIYQGAPAFGVVLAPVTGIVWHAMRGELAYRRQGLHDTVLRTRTPATAPLR
                     VAASRSHRSPQTEALLARMGRIETIAQGSSLKFCRIAEGGLDVYPRLGPTSEWDTAAG
                     QCVLHAAGGAVLSAATGKPFRYNRRETLLNGDFIALGDTSLPWRDWLSD"
     gene            3577..4416
                     /gene="mazG"
                     /locus_tag="QEL58_002476"
     CDS             3577..4416
                     /gene="mazG"
                     /locus_tag="QEL58_002476"
                     /EC_number="3.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006385122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside triphosphate pyrophosphohydrolase"
                     /protein_id="HDS1676935.1"
                     /translation="MSAHDTPTPRSAASTELERLLSIMARLRDPQGGCPWDLEQNFAT
                     IAPYTIEEAYEVADAIDRGDLDDLCDELGDLLLQVVFHARMAEEQGAFAFADVARAIS
                     DKMQRRHPHVFADVSVDDADGVMRNWEAIKRAERAAKGEQDTSALAGISRGLPEWQRA
                     VKLQSRAAKVGFDWPGPLPVLDKAAEELQELREEFERGDLAGNKVRLQEELGDLLFVC
                     ANLARHAEIDLGAALRGANHKFERRFRSMEAQAEAQGSTLAAMDLDAQEGLWQRAKAA
                     EKA"
     gene            4413..4742
                     /locus_tag="QEL58_002477"
     CDS             4413..4742
                     /locus_tag="QEL58_002477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012511870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YnfA family protein"
                     /protein_id="HDS1676936.1"
                     /translation="MKTLALFLLTALAEIVGCYLPWLWLRKGGSIWLLLPAAASLALF
                     AWLLTLHPTASGRVYAAYGGVYIGTALFWLWLVDGIRPSRWDLIGAALCLAGMAVIMF
                     GPRTPSV"
     gene            4959..5261
                     /locus_tag="QEL58_002478"
     CDS             4959..5261
                     /locus_tag="QEL58_002478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF962 domain-containing protein"
                     /protein_id="HDS1676937.1"
                     /translation="MSRFASFREFYPFYLSEHRHPVSRRLHFIGSCGVLLLLAAAILR
                     GQPVLLLAALACGYGFAWVGHFFFEKNRPATFRHPLYSFVGDWVMFVDILRRRVPW"
     gene            5329..6288
                     /locus_tag="QEL58_002479"
     CDS             5329..6288
                     /locus_tag="QEL58_002479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPFH/Band 7/PHB domain protein"
                     /protein_id="HDS1676938.1"
                     /translation="MFPTMFFTVVLAFVAVVILFKAVRMVPQGYEWTVERFGRYTHTM
                     TPGLHFLIPIVYGVGRKVNMMEQVLDVPSQEVITKDNAAVRVDGVVFFQVLDAAKAAY
                     EVANLEVAMIALVQTNIRTVIGSMDLDESLSQREVINAQLLSVVDHATNPWGVKVNRI
                     EIRDIQPPRDLLDAMARQMKAEREKRAQILEAEGSRQSEILRADGEKQATVLEAEGRR
                     EAAFRDAEARERLAEAEAMATKVVSAAIAEGDVQAINYFVAQKYVEAFKELASSPNQK
                     LVLMPMEASGVIGSIAGVAELAKQALASQGNAPAGKRPPPIGG"
     gene            6290..6733
                     /locus_tag="QEL58_002480"
     CDS             6290..6733
                     /locus_tag="QEL58_002480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010482721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NfeD family protein"
                     /protein_id="HDS1676939.1"
                     /translation="MRWEVVGWGALALLLFAAEALAPGAFMLWIGIGAAAVFVLVAVF
                     SGIPLLWQVVAFVLLSIVSIQCYRRWGRARARPSDAPLLNRRAEQLVGRVVPLQQGIV
                     GGQGRVSIDDAYWQVSGPELQAGSLVRVVAVQGSTLQVEPADRPL"
     gene            6815..7927
                     /gene="gcvT"
                     /locus_tag="QEL58_002481"
     CDS             6815..7927
                     /gene="gcvT"
                     /locus_tag="QEL58_002481"
                     /EC_number="2.1.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008268250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system aminomethyltransferase
                     GcvT"
                     /protein_id="HDS1676940.1"
                     /translation="MTQKTLLNDTHRALGAKMVDFGGWDMPIHYGSQLDEHHLVRRES
                     GVFDVSHMTVVDLRGDQVKPFLRRLLANSVDKLKVPGKALYSCMLNPRGGVIDDLIVY
                     YLGDDFFRMVVNASTREKDLAWLREQAAPFGVSVEQRPDLAILAVQGPQARDIVAGLV
                     GGADRDALAKLGRFAALQVKADDGVELFVARTGYTGEDGFEILLPQDAVVAFWNRLLA
                     AGVKPAGLGARDTLRLEAGMNLYGQDMDEDISPYEAALAWTVSLDEGRDFIGRDVLEA
                     QKTAGTARQMIGLVMDEKGVLRHGQAVTTASGQGEILSGTFSPSLAKGIAFARVPAGE
                     LGEVTVDIRGRQVPVRVVKFPFVREGQAQPGVLADA"
     gene            8021..8416
                     /gene="gcvH"
                     /locus_tag="QEL58_002482"
     CDS             8021..8416
                     /gene="gcvH"
                     /locus_tag="QEL58_002482"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010368686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system protein GcvH"
                     /protein_id="HDS1676941.1"
                     /translation="MSEIPGDLKFLKSHEWARVEGNGRVTVGISDHAQGLLGDLVYVE
                     LPEVGATAKAGEQIAVVESVKAASDVYSPISGKVVEVNSDLSDKPETINEDAYGEGWM
                     FVVELTNAEELNELLDPDAYAEALENEDH"
     gene            9030..9707
                     /locus_tag="QEL58_002483"
     CDS             9030..9707
                     /locus_tag="QEL58_002483"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012481035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histone"
                     /protein_id="HDS1676942.1"
                     /translation="MQGTSRSDARSADRGGHCRIRNGAPDAPAVPARSTCGFDPPGRF
                     NSLSLTRSHPMATKKAAKKKPAAKKAVKKVAKKAAAKKAVKKVAKKATAKKAVKKAAK
                     KVAKKTTAKKAVKKAAKKVAKKSTAKKAVKKTAKKAVKKVAKKATKKTAKKATARKPA
                     KKVAKKAVKKTAKKAVKKAVKKTAKKATKKAAPKKAAKKVAKRKPAARKKKAAPVALP
                     ATPAPLI"
     gene            complement(9952..11352)
                     /locus_tag="QEL58_002484"
     CDS             complement(9952..11352)
                     /locus_tag="QEL58_002484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-lactamase family protein"
                     /protein_id="HDS1676943.1"
                     /translation="MKKNSLRRPIRSAATGLLGMLMPVALSTTAQTPPALPPMPANIE
                     STAATAVAHTQPAAYRTGLVPQVQAPAAGFNVANIESMAQQLTYGERVPGMAVAIVQG
                     GRILSARGYGVTDVNNPLPVDAHTVFRLASLSKAFAGTMAGLLVNDGTLRWDSKVTDY
                     VPGFRLNSPEATDRLTVADVLSHRVGLPYNAYDRDIEGNAEYYALTQKLANTSLKCLP
                     GDCYAYQNVAFSLIGDVVYAASGSFYEQSVERRIFKPLGMNDASLGLAGIQASSRWAR
                     PHVRSRNGWVSLTPKPTYYRVAPAAGVNASASDMAQWLLAHTGHRPDVLPAPLLATLH
                     SSLINTPGEMRSGWRRERLHSAGYALGWRTFDYAGHDVVFHAGAVQGYRGLVALVPER
                     DPGIAIMWNGESGLPSGLLPTVLDSALGLPAQRWLDVDTDFGSDNLMAEGASPAQQDK
                     RKGKGASSNRAVASPR"
     gene            11639..12967
                     /locus_tag="QEL58_002485"
     CDS             11639..12967
                     /locus_tag="QEL58_002485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014648077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDS1676944.1"
                     /translation="MSAASGKGPLRGLVAALRESPALWWSFLYFFCLLSGYYVLRPVR
                     EAMAASADLETVFPPILIGWFDRHGIALKDFVLQFLFTCVFVIMLVLQPVYGWLVSRF
                     PRRVFLPAVYGFFIVTLLGFYALFDSGVPGRGMAFFLWVMVFNLFAVAVFWSFMADVF
                     SNVQARAYYGYIGAAGTVGAFLGPIITSALVMRVGIANLMLVSAGFLLVCLLCIWRLR
                     HWAVLREREQQLVSGEQPMGGSVLDGLKLIVREPLLRWLAVMVVFGVGVGTLLYNQQA
                     SIVRAAFTDPAASTAFFSRIDLAVNALALLMQLGLTRWLLSRHGIAPALLIPGFAILI
                     GFSVLAASPMPLMVAVVQVMTRASEFALAKPARETIYTRVDRQWRYKAGAAIDTVVYR
                     GADLSFTWVHKALSLFGSHVVFIGGVLVAGFMTLAAFGVLREEKKLPRDR"
     gene            12998..13348
                     /locus_tag="QEL58_002486"
     CDS             12998..13348
                     /locus_tag="QEL58_002486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011037996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1304 domain-containing protein"
                     /protein_id="HDS1676945.1"
                     /translation="MLMIALLLTVLVAVLHLYFLVLEMFLWTRPLGLKTFRNTPEKAE
                     TTRVLAANQGLYNGFLAAGIVMGLVIDQPVLVTFSLACVVVAGCYGAYSVSRRIFMIQ
                     AVPAILALVVRAVV"
BASE COUNT         2145 a         4303 c         4634 g         2309 t
ORIGIN      
        1 ccttacccca ggtctcccag ctgtgcctgc agcgccgcga tcgcggccag gccggcggtt
       61 tccgtgcgca ggatccgcgg gcccagctgc aatccctgga acccggccgc cgccaactgg
      121 tcgcggtcgc gcggcgacca accgccttcc gggccgatgg caatcacgat gccgccggcg
      181 ggtgcggcgt ccagcgtcga cagccgatgc gcgccctgcg ggtccagtgt cagccgcaac
      241 gtatcggcag gcagtgccgc cgcagcctgc gccagtgaca ggggcggacc caccggtgga
      301 atacgcgcac gccccgactg gccgcacgcc gaggtcacca cgttgttcca gtgcgctacg
      361 cgcttctcgg cgcgtgcggc gtcgagcttc acctcggtgc gctcggcgtt gaccggaatg
      421 atcgccgcga cgcccagttc ggtggccttc tgcaggataa ggtccatctt ctcgccacgg
      481 gcgatgccct gcagcagggt gatcgccaac ggtgattcgt tgtccaccct gtccactgcg
      541 tcgatgcgga cctgaacctc gcgcttgccg gccacggtga gggtggcgct gtagtcatgg
      601 ccgtcgccgt tgaacagcac gcaggtatcg ccttcgcgca ggcgcatcac ccgcaccaga
      661 tggttggcgg tctcttccgg cagggccagg gtctggccgc tgtgcagcgc caggtcgatg
      721 gggcagcggg tcacgcgcat gcaatcgcct cgtcaatcgc tgccagcgtg gtatgtgcca
      781 gcagctccag ttgttcgtcg tccacgcaat agggtggcat ccagtacagc acgtcaccca
      841 gcgggcgcag caccacgcca cgcttcagcg cggccttgta ggcgtgcagc cccagccgca
      901 ggcccgggtc gaacggcgtc tgcctgttgc cgccacgcga cagctcgaac gccaccacca
      961 tgccggcctg gcgcacatcg gccacgtgcg ggtggtcggc aaacggtgcc gccagcgtac
     1021 ccatcaccga ggcgatccca cggttgcggg cgatcacatc gtcgtcgcgg aagatgtcaa
     1081 gcgttgccag ggcggccgcg caggccagcg gattgccggt gtagctgtgc gaatgcagga
     1141 acgcacgctc gcgcgaatca tcgaggaagg cgtcgtacag cgcctgtgtt gccagcaccg
     1201 cggccagtgg caggaagccg ccggtcaggc ccttggacag gcacatcagg tccggcatca
     1261 ccccggcctg ttcgcaggcg aacagcgtgc cggtgcggcc gaagccggtg gcgatctcgt
     1321 cggcgatcat gaacgcaccg tgtgcatcgc acagttcgcg cacgcgctgc aggtagaccg
     1381 ggtcatgcat gcgcatgccg cccgcgcact gcaggcgtgg ctccaggatc accgcgcaga
     1441 tctcgcccgg gtgctggtcg aacagcgtgg ccagcccgtc ggcggcctgg cgcgcacggt
     1501 cggcggggtt ctgtcccggc tcggccagat aggcatcggg cgagggcgcg aacaggcctt
     1561 cggccagcag cggcgcatag acacggcggt acagcgggat gtcacccagc gccagggcgc
     1621 ccagggtctc gccgtggtag ccgttctcca gtgagatgaa gcgggtgcgg cgggactcac
     1681 cgcggttctg gaagtactgg aaggccattt tcagcgccac ttccaccccg gctgaaccgt
     1741 tgtcggcgta gaacaccttg gccagcggct cgcggccggg ttggcgcggc gccagtgcca
     1801 gcaggcgctc ggccaggatg atggccggct cgtggccgaa tccggccagc atcacctgtt
     1861 ccagttgccc ggcctgggca gcgatggcgc cgccgatgcg cggctcggcg tggccgaaca
     1921 ggttggtcca ccagctgctg accgcgtcca ggtatcgatt gccgtcgtgg tcgatcagcc
     1981 aggcaccttc gccgcgggcg atcggcacca gcggcagggt gtgcggatgc tcgcgcatct
     2041 gcgtgcacgg gtgccacagc acctgcaggt cgcgctgccg ccattggcgg gccagcgggg
     2101 agggggttgg gtctgctagc atttcgggct catgaacatg ttgctgcctg cacattctat
     2161 cggccccggc gcaaacgccg gccgccgcgg agactccgca tgaacgatga ccgtgccggc
     2221 cgtcgcttgc cgatcatcca tcggatcacc gatgaagaga acggtccctt ccagcgccag
     2281 catctggacc tggaattctc caacggcgag caccgccgct tcgagcgcct ggtcagccgt
     2341 ggccatggcg cggtggtggt ggtgccgatg ctcgacgagg aaaccgtgct gctggtacgt
     2401 gaatacgcgg ctggcatgca tcgctacgag ctgggcctgg tcaagggccg gatcgacgcc
     2461 ggcgagacgc ccgagcaggc ggccgaccgt gagctgaagg aagaggctgg ctacggtgcg
     2521 cgccgggtcg acgtgctgcg cgcgatgacc ctggccccga cctacatgag ccatcagtcg
     2581 tggctggtgg tggcacgcga tctttacccg gagaagctcc ccggcgatga gccggaagag
     2641 ctggaggtcg tgccgtggaa gctggccgag ctggaccagc tgatgctgcg cgaggacttc
     2701 tccgagggtc gctcgctggc agcgctgttc atcgcccgcc agtggctgca gggagcgcga
     2761 tgatcaagct gaccacggac ctgcgcgaga cggccatcgc catcgcccag gaagccggac
     2821 aggccatcat gcaggtgtat gccggtggct tcgacgtgcg gatcaaggat gacaacagcc
     2881 cggtcaccgc ggctgacctg gccgccaacc aggtgatcga acagggcctg cagcagctga
     2941 ccccggagct tccggtcctg tccgaggaat cggcgcaggt gccatgggag cagcgtcgcc
     3001 actggggcgc gtactggctg gtcgacccgc tggacggcac ccgcgagttc gtcaagcgca
     3061 acggcgagtt cagcgtcaac atcgccttga tctaccaggg cgcgcccgcc ttcggcgtgg
     3121 tactggcccc ggtcaccggc atcgtctggc atgccatgcg tggcgagctg gcctaccggc
     3181 gccagggcct gcatgacacc gtgctgcgca cgcgtacgcc ggccaccgcg ccgctgcggg
     3241 tcgccgccag ccgctcgcac cgctcaccgc agactgaggc actgctggcc cgcatgggcc
     3301 gcatcgagac cattgcccag ggctcgtcgc tgaagttctg ccggatcgcc gaaggcggcc
     3361 tggacgtcta cccgcggctc ggcccgacct ccgaatggga taccgccgcc ggccagtgcg
     3421 tgctgcacgc cgcgggcggc gcggtactgt cggcagcgac cggcaagccc ttccgctaca
     3481 accgccgcga aaccctgttg aacggcgatt tcattgccct tggcgacacc agcctgccgt
     3541 ggcgcgactg gttgtccgat tgaccctgga ggccgcatga gcgcgcatga cacccccacc
     3601 ccgcgcagcg cagccagcac cgagctggag cgcctgctgt cgatcatggc gcgcctgcgc
     3661 gatccgcagg gcggctgccc gtgggatctg gagcagaact tcgcgaccat cgcgccgtac
     3721 accatcgagg aagcctacga ggtcgccgat gcgatcgacc gtggcgacct cgacgatctc
     3781 tgtgacgagc tgggcgacct gctgctgcag gttgtattcc atgcgcgcat ggccgaggag
     3841 cagggcgctt tcgcctttgc cgatgtcgcc cgcgcgatca gcgacaagat gcagcgccgc
     3901 catccgcatg tgttcgccga cgtcagcgtc gatgatgccg acggggtgat gcgcaactgg
     3961 gaggcgatca agcgcgccga gcgcgccgcc aagggcgagc aggatacctc cgcgctggcc
     4021 ggcatctcgc gcggcctgcc ggaatggcag cgggcggtga agctgcagtc gcgtgcggcc
     4081 aaggtcggtt tcgactggcc gggcccgctg ccggtgctgg acaaggcggc cgaggagctg
     4141 caggaactgc gcgaggagtt cgagcgcggt gaccttgccg gcaacaaggt gcggctgcag
     4201 gaagaactgg gcgacctgct gttcgtctgc gccaacctgg cccgccacgc cgagatcgac
     4261 ctgggcgccg cgctgcgcgg ggccaatcac aagttcgagc gtcgcttccg ttcgatggaa
     4321 gcgcaggccg aagctcaggg cagcacgttg gcagcgatgg acctggatgc gcaggaaggc
     4381 ttgtggcagc gcgccaaggc ggcggaaaag gcgtgaagac actcgccctg ttcctgctga
     4441 ccgcgctggc cgagatcgtg ggctgctacc tgccctggtt gtggctgcgc aagggcggga
     4501 gcatctggtt gctgctgccg gcggcggcca gcctggccct gttcgcgtgg ctgctgaccc
     4561 tgcatccgac cgccagcggc cgcgtctatg ccgcctacgg tggcgtctac atcggcaccg
     4621 cgctgttctg gctgtggctg gtcgacggca tccgccccag ccgctgggat ctgatcggcg
     4681 cagcactgtg cctggccggc atggcggtga tcatgttcgg gccgcgcacc ccctctgttt
     4741 agcgtcgagc gtactcgact gctccggcgt tctatagcgc cgggccattc ccggcggatt
     4801 ccgctcttct gtagagtcga gccatgctcg actgcatctg cgagggccag tcgagcatgg
     4861 ctcgactcta caaaggcagc gccaccggat catgcactgc cgctttccct cccgggaagg
     4921 cgcatgatgg cggtgaccac ggcccccgga gcacgtgcat gtcccgattc gccagcttcc
     4981 gcgagttcta tccgttctac ctcagcgagc accgccatcc ggtgtcgcgc cggctgcact
     5041 tcattggcag ctgcggggtc ctgctgctgc tcgccgcggc aatcctgcgt ggacagccgg
     5101 tgcttctgct ggccgccctg gcctgcggtt atggattcgc ctgggttggc cacttcttct
     5161 tcgagaagaa ccgcccggcc accttccggc atcccctgta ttcgttcgtg ggtgactggg
     5221 tgatgttcgt ggacatcctc cgccgacggg ttccctggta gcccaggctg tgcatgccgc
     5281 cttcacgcgc tatgctgggg cctggacgtc atagataagg aaagcgcgat gttccccacc
     5341 atgttcttta ccgtggtact ggccttcgtg gccgtggtca ttctgttcaa ggcagtacgg
     5401 atggtgccgc agggatacga atggaccgtc gagcgcttcg ggcgctacac ccacaccatg
     5461 acccctggcc tgcacttcct gatcccgatc gtctacgggg tggggcgcaa ggtgaacatg
     5521 atggagcagg tgctggacgt acccagccag gaagtgatca ccaaggacaa cgcggccgtt
     5581 cgcgtggatg gcgtggtgtt cttccaggta ctggatgcgg ccaaggccgc ctacgaggtg
     5641 gccaatctgg aagtggcgat gatcgccctg gtgcagacca acatccgtac cgtgatcggt
     5701 tcgatggacc tggacgaatc gctgagccag cgcgaggtga tcaatgcgca gctgttgagc
     5761 gtggttgacc atgccaccaa cccctggggc gtgaaggtca accgcatcga gatccgcgac
     5821 atccagccac cgcgcgacct gctggatgcg atggcccggc agatgaaggc cgagcgcgag
     5881 aagcgcgcgc agatcctcga ggcagaaggt tcgcggcagt cggagatcct gcgcgccgat
     5941 ggcgagaagc aggctaccgt gctggaagcc gaaggtcgcc gcgaggccgc gttccgcgat
     6001 gccgaggcgc gcgaacgcct ggccgaggcc gaggccatgg ccaccaaggt ggtgtcggcg
     6061 gcgatcgccg agggcgacgt gcaggcgatc aactacttcg tcgcccagaa gtacgtggaa
     6121 gcattcaagg aactggcgag ttcgccgaac cagaagctgg tgctgatgcc gatggaagcc
     6181 agtggcgtga tcggttccat cgccggcgtg gccgagctgg ccaagcaggc gctggcgtcc
     6241 cagggcaatg caccggcggg caagcgaccc ccgccgatcg ggggctgaca tgcgttggga
     6301 agtcgtaggc tggggcgcac tggcattgct gctgtttgcc gccgaggcac tggcgccagg
     6361 cgcgttcatg ttgtggatcg gcatcggtgc ggcggccgtg ttcgtactgg ttgccgtgtt
     6421 cagtggcatt cccctgttgt ggcaggtggt ggcgttcgtg ctgctgagca ttgtttcgat
     6481 ccagtgctac cggcgctggg gcagggcacg ggcgcggccc agcgatgcgc cgttgctcaa
     6541 ccgccgcgcc gagcagctgg tcggacgggt ggtgccgttg cagcagggca tcgtcggcgg
     6601 gcagggccgg gtcagcatcg acgacgccta ctggcaggtc agcggcccgg aactgcaggc
     6661 cggcagcctg gtgcgggtgg tggcggtgca gggcagcacg ctgcaggtcg agccggcaga
     6721 ccgccccctg tagagccgct gcgctgcggc acgcctgcgg gcgaccgatc tgggataatg
     6781 gggattcttg tttcctctgc tgccggaccc ggtcatgacc cagaagacgc tgctcaacga
     6841 tacccaccgc gccctcggcg ccaagatggt cgatttcggg ggttgggaca tgcccatcca
     6901 ctacggctcg cagctcgacg agcaccatct ggtgcgtcgc gagtcgggtg tgttcgacgt
     6961 cagccacatg accgtggtcg acctgcgcgg tgaccaggtc aagccgttcc tgcgccgcct
     7021 gctggccaac tcggtcgaca agctgaaggt gccgggcaag gcgctgtact cgtgcatgct
     7081 gaatccgcgc ggcggcgtca tcgacgacct gatcgtctat tacctcggcg acgatttctt
     7141 ccgcatggtg gtcaacgcct ccacccgcga gaaggacctg gcctggctgc gcgagcaggc
     7201 cgcgccgttc ggcgtcagcg tcgagcagcg cccggacctg gccatcctcg ccgtgcaggg
     7261 accgcaggca cgcgacatcg tggccggcct ggtcggcggc gccgaccgcg acgcgctggc
     7321 caagctcggc cgtttcgctg ccctgcaggt caaggccgac gatggtgtcg agctgttcgt
     7381 cgcccgcacc ggttacaccg gcgaagacgg cttcgagatc ctgctgccgc aggatgcggt
     7441 ggtcgcgttc tggaaccgcc tgctggccgc gggcgtgaag ccggcgggcc tcggtgcccg
     7501 tgacaccctg cgcctggaag ccggcatgaa cctgtacggc caggacatgg acgaggacat
     7561 cagcccttat gaagcggcac tggcctggac cgtgtcgctg gacgaaggcc gcgacttcat
     7621 cggccgcgac gtgctggaag cgcagaagac cgccggcacc gcgcgccaga tgatcggcct
     7681 ggtgatggac gagaagggcg tgctgcgcca cggccaggcg gtgaccaccg ccagcggcca
     7741 gggcgagatc ctgtccggca ccttctcgcc aagcctggcc aagggcatcg cgtttgcccg
     7801 cgtgccggcc ggcgaactcg gcgaggttac cgtcgatatc cgtggccggc aggtgccggt
     7861 gcgcgtggtc aagttcccgt tcgtgcgcga aggccaggcc cagcccggcg tgcttgccga
     7921 cgcctgatcc gaacatgccg gccgtcactg acagcagtgg cggccggttg gttacactag
     7981 ccccgttttt tccacccctg catatctctg gagcagtccc atgagcgaga tccccggcga
     8041 cctcaagttc ctcaagtccc atgagtgggc ccgtgtcgaa ggcaacggcc gcgtcaccgt
     8101 cggtatttcc gaccacgccc agggcctgct cggtgacctg gtatacgtcg agctgccgga
     8161 agtcggcgcg accgccaagg ccggcgagca gatcgccgtt gtcgaatcgg tcaaggccgc
     8221 ttcggacgtc tacagcccga tcagcggcaa ggtcgtcgag gtcaactcgg acctctccga
     8281 caagccggaa accatcaacg aagatgccta cggcgaaggc tggatgttcg tggtcgaact
     8341 gaccaacgcc gaagagctca acgagctgct ggacccggac gcatacgccg aagccctgga
     8401 aaacgaagac cactgagtcg tcgttcccgg gttcggacac ggccaccttc gggtggccgt
     8461 ttttgttttg gcgaacgcgc cggactcatg acgcagggtt cgctgcacac cctcgacgcg
     8521 gcatcagccg acctgcgggc ggtgccgacg ggcgtgcgca gttttgcgca aatccgcgtt
     8581 tccaccctgc gtcggcgcgt ccggatgtga aaacttttcg ccccccgttg cggtgccgtt
     8641 gtgctggcgt tggcactggc gacgaccgcc gttggcgatg catgtccgtc actgcgagtc
     8701 gcatccatgc atctgcgcgg agtgcctatt tcaagtgttt tttgttcaac gcatgcattg
     8761 cttgtgttgt cgccagcgtg cgtgcgttgt gctttgaggg tcgttgcggg cggagcgcaa
     8821 cggccgtgca ggcgccaccg ggaatggcgc ggatgtgaaa atttttcgcg ggggttgttg
     8881 acagtaaaaa aaaccgtgat taggtttcgc ctcagcagac cttgcctgcc caaccgagtg
     8941 cgcagaatca atcgtccgat gcgaagcagc cccttcaaga ccaccgcgac cctgatgacg
     9001 gtggacatgg ccccgcttcc cccggagaaa tgcaaggcac ctcccgttcc gatgcccgct
     9061 ccgccgatcg aggcgggcat tgccgcatcc gtaacggcgc gcctgacgcg ccggcggtcc
     9121 ccgcacgcag cacctgcggg tttgatccac ctgggcgttt caactcccta tcactgacga
     9181 ggagccatcc catggcaacc aagaaagctg cgaagaagaa gcccgccgcc aagaaagcgg
     9241 tgaagaaggt cgcgaagaag gccgctgcca agaaggcagt gaagaaggtc gcgaagaagg
     9301 cgaccgccaa gaaggcagtg aagaaggctg cgaagaaggt cgccaagaag accactgcga
     9361 agaaggcagt gaagaaggcg gcgaagaagg tagccaagaa gtccactgcc aagaaggccg
     9421 tcaagaagac cgcgaagaag gccgtcaaga aggtagccaa gaaggccacc aagaagactg
     9481 ccaagaaggc cactgcccgc aagccggcca agaaggtcgc caagaaggca gtaaagaaga
     9541 ctgcaaagaa ggcggtgaag aaggcagtca agaagaccgc gaagaaggcg accaagaagg
     9601 ctgccccgaa gaaggcagcg aagaaggttg ccaagcgcaa gccggccgcc cgcaagaaga
     9661 aggccgctcc ggtcgctctg ccggcaacgc cggcgccgct gatctaagta cttcccgata
     9721 gccgcatcct gaaacccctt ccctgttgcc cagcagggag ggggtttttt tatgggcgct
     9781 cgccgccatg ggcaacggta gagtcgactg ccagtcgact gcttcaccgc ccttgtaggg
     9841 tcgagcacgc tcgactccat cgatcaccgg cggtcgagca cggcgctgtg cagacgaaca
     9901 aaaagggcgg cccgcaggcc gcccctcatg cttacggcac agctcgccag atcagcgcgg
     9961 cgacgccacc gcgcggttgc tcgaagcccc cttgcccttg cgcttgtcct gctgcgcggg
    10021 gctcgcgccc tcggccatca ggttgtcgct gccgaagtcg gtgtccacgt ccagccagcg
    10081 ctgcgccggc aggccgagcg cggaatcgag cacggtcggc agcaggccac tgggcaggcc
    10141 gctttcgccg ttccacatga tggcgatgcc gggatcgcgt tccggcacca gcgcgaccag
    10201 gccgcgatag ccctgcaccg cgccggcatg gaacaccacg tcgtggccgg cgtagtcgaa
    10261 ggtgcgccag cccagtgcgt agccggcaga atgcaggcgc tcgcggcgcc agcccgaacg
    10321 catctcgccg ggggtgttga tcaggctgga atgcagcgtc gccagcagcg gtgccggcag
    10381 cacgtccggg cggtgcccgg tatgggccag cagccactgc gccatgtcgc tggcgctggc
    10441 attgacgccg gcggccgggg cgacgcggta gtaggtcggc ttcggcgtca gcgataccca
    10501 gccgttgcgg ctgcgcacgt gcggacgcgc ccagcgcgag ctggcctgga tgccggccag
    10561 gccgaggctg gcatcgttca tgcccagcgg cttgaagatg cggcgttcga ccgattgttc
    10621 gtagaagctg cccgaggcgg catagaccac gtcgccgatc aggctgaagg ccacgttctg
    10681 gtacgcgtag cagtcgcccg gcaggcactt caggctggtg ttggccagct tctgggtcag
    10741 cgcgtagtac tcggcgttgc cttcgatgtc gcggtcgtag gcgttgtagg gcagcccgac
    10801 gcgatggctg agcacgtcgg cgacggtcag gcggtcggtg gcctccggtg agttcaggcg
    10861 gaagcccgga acatagtcgg tgaccttgct gtcccagcgc agggtgccgt cgttgaccag
    10921 caggccggcc atggtgccgg cgaatgcctt ggacagcgag gccaggcgga acacggtatg
    10981 cgcatcgacc ggcagcgggt tgttgacgtc ggtgacgccg tagccgcgcg cgctgaggat
    11041 gcggccgccc tgcacgatcg ccactgccat gcccggcacg cgctcgccat aggtgagctg
    11101 ctgtgccatc gactcgatgt tggcgacgtt gaagcctgcg gccggggcct gcacctgcgg
    11161 caccagtcca gtgcggtagg ccgccggctg ggtgtgggcg acggcggtgg cggcggtcga
    11221 ttcgatgttg gccggcatcg gtggcaatgc cggcggggtc tgcgcggtgg tggacaaggc
    11281 aacgggcatc aacatgccca gcaaaccggt ggccgccgaa cggatcggac ggcgcaggct
    11341 gttctttttc atcggttgga cccgtgcgcg actgctgatg gcgattctag cgccgctttt
    11401 cccctgtgca caaacaaagc gaagatgaat gcgcatctcg ttgaaaaagt tggaattttg
    11461 acgctccaaa tgcgtgtgtc ggaacgtgtc atccggacct tccgtagacc tggccccaac
    11521 gtccatcggc ggtcgcctgc tggcgatgtt gcattgcatt ggctaacgta cgcgcttcac
    11581 tgcgcccgga gcctgcgatg ccactgtcca accgccgtct gtgggcgagg gacgccgcgt
    11641 gagcgcggca tcgggcaagg ggccgctgcg cggactggtg gcggcgctgc gcgagtcgcc
    11701 ggcgctgtgg tggtccttcc tgtatttctt ctgcctgctc agcggttact acgtgctgcg
    11761 tccggtgcgc gaggcgatgg cggcctcggc agacctggaa acggtgttcc cgccgatcct
    11821 gatcggctgg ttcgaccgtc atgggatcgc gttgaaggac ttcgtcctgc agttcctgtt
    11881 cacctgcgtg ttcgtgatca tgctggtgtt gcagccggtg tacggctggc tggtcagccg
    11941 tttcccgcgc cgggtgttcc tgccggcggt gtatggcttc ttcatcgtca ccctgctggg
    12001 gttctacgcg ctgttcgaca gcggggtacc tggccggggc atggccttct tcctctgggt
    12061 catggtgttc aacctgttcg cggtagcggt gttctggagc ttcatggccg acgtgttctc
    12121 caacgtgcag gcgcgcgcgt actacggcta catcggcgcc gccggcaccg tcggtgcctt
    12181 cctcggcccc atcatcacca gtgcgctggt gatgcgcgtg ggtatcgcca acctcatgct
    12241 ggtctcggcc ggcttcctgc tggtgtgcct gctgtgcatc tggcggttgc ggcattgggc
    12301 ggtactgcgc gaacgcgagc agcagctggt gtcgggcgag cagccgatgg gcggcagcgt
    12361 gctcgatggc ctgaagctga tcgtgcgtga gccgctgttg cgctggctgg cggtcatggt
    12421 ggtgttcggg gtgggcgtgg gtacgctgct gtacaaccag caggccagca tcgtgcgcgc
    12481 ggccttcacc gacccggcgg ccagtaccgc gttcttctca cgcatcgacc tggcggtgaa
    12541 cgcgctggcg ctgttgatgc agctgggcct gacccgctgg ctgctgtcac gccatggcat
    12601 cgcgccggcg ctgctgatcc cgggcttcgc gatcctgatc ggcttctcgg tgctggctgc
    12661 ctcgccgatg ccactgatgg ttgcggtggt gcaggtgatg acgcgcgcca gcgaattcgc
    12721 gctggccaag ccggcgcgcg aaaccatcta cacccgcgtg gaccgccagt ggcgctacaa
    12781 ggccggcgcg gcgatcgaca cggtggtcta ccgcggtgcg gacctgagct tcacctgggt
    12841 gcacaaggca ctgtcgttgt ttggatcgca tgtggtgttc atcggtggcg tactggttgc
    12901 cggcttcatg accctggccg cgttcggcgt gctgcgcgaa gaaaagaagc tgccgcgcga
    12961 ccgctgaacc ggtccggctt tttcgaggag aggaacgatg ttgatgatcg cgctgttgct
    13021 gaccgtgctg gtcgcggtgc tgcacctgta cttcctggtg ctggagatgt tcctgtggac
    13081 ccgcccgctg ggcctgaaga ctttccgcaa tacgccggag aaggccgaga ccacgcgggt
    13141 actggcggcc aaccagggcc tctacaacgg cttcctggcg gcggggatcg tgatggggct
    13201 ggtgatcgat cagccggtgc tggtgacgtt ctcgctggcc tgcgtggtgg tggcggggtg
    13261 ctatggcgcg tacagcgtga gccggcgcat tttcatgatc caggcggtgc cggcgattct
    13321 ggcgttggtt gttcgcgcgg tggtgtgagt ttccggccaa cggcgcagcc cctcgtgggt
    13381 gggtcgcgta g
//
LOCUS       DAOKIP010000106        13383 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.106,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000106 DAOKIP010000000
VERSION     DAOKIP010000106.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 13383)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13383)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13383
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.106"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(23..1255)
                     /locus_tag="QEL58_002487"
     CDS             complement(23..1255)
                     /locus_tag="QEL58_002487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TraB/GumN family protein"
                     /protein_id="HDS1676946.1"
                     /translation="MNEPMTETLPETGDDLFAGQPVRVVERDGVRYTLLGTAHVSRAS
                     VEAVEKAIDSGRFDAVAVELDPQRLQALSDPDTLAKLDLVEVIRKGRVALFAANLALS
                     AYQRRLAEQLDIEPGAELKRAVELARERNLPVHLIDREVGLTFRRASQRLGFFGKLKL
                     VAGLGAGLFSSEEVGENEIEKLKQGDMLESSFGEFASESPALYETIIGERDRYMATRL
                     REEHDPQQREVLAVVGAGHLAGLARYLETDTEAPAPLRAELEAVPKKRNIPWFTLGIL
                     AIVATGIGVGFYRGGLGVGTELLATWAMYTGGLAGLGCLLAGGHPLSILTAIAVAPFK
                     PFRLSIPTGAFSALVEARLRKPAYEDFLKLRDDAQSLKGWYRNRVTRVVLTFMLTNIG
                     SMLGLWLTTFKVWGKVAG"
     gene            complement(1248..1778)
                     /locus_tag="QEL58_002488"
     CDS             complement(1248..1778)
                     /locus_tag="QEL58_002488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HDS1676947.1"
                     /translation="MAVLIRDAGPADIDAITAIYAVEVTDFVNTYEYDIPDATEMLRR
                     MRDIIDRGFPYLVAEIDGQVAGYAYANTYRTRVAYQWTVENSVYVDARFQGKGVGTGL
                     LQALIDACVARGYRQMVAVIGEPTNTASIKLHERFGFHLVGVFKGLGRKHGRWLDTVQ
                     MQRALGDGADTAPSNE"
     gene            complement(1793..2680)
                     /locus_tag="QEL58_002489"
     CDS             complement(1793..2680)
                     /locus_tag="QEL58_002489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008267821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon-nitrogen hydrolase"
                     /protein_id="HDS1676948.1"
                     /translation="MNSRSPLTVALIQERNHGDAAANLAVIEARVAEAAAQGAKLVLL
                     QELHNGPYFCQHESVDEFDLAEPIPGPSTERLGALAKKHGVVLVGSLFERRAAGLYHN
                     TAVVFEKDGTLLGKYRKMHIPDDPGFYEKFYFTPGDIGFTPIDTSVGRLGVLVCWDQW
                     YPEAARLMALAGAELLLYPTAIGWDPDDVQDEKTRQRDAWVLSHRGHAVANGLPVLSC
                     NRVGHEASPLGASGIQFWGNSHVLGPQGEFLAEAGTDATVLLCDVDLQRSEHVRRIWP
                     FLRDRRIDAYGDLLKRYID"
     gene            complement(2872..3909)
                     /locus_tag="QEL58_002490"
     CDS             complement(2872..3909)
                     /locus_tag="QEL58_002490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010372979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="agmatine deiminase family protein"
                     /protein_id="HDS1676949.1"
                     /translation="MNQTLRFPAEWEAQSGVLIAWPTADTDWAERLGQVEETYIALVA
                     AITRFQPVLICVADDDVETYAEMRLRSNRIDMDKVHFTTAAYDDTWLRDSGPITLRRA
                     DGGFQLLDFRFTGWGGKFDATLDDQLVGVLDQAGVFNDAPVRSIPFALEGGGIETDGE
                     GTLLTTWKCLHERHPDRDRASLSADLADWLQQDRVLWLDHGYLEGDDTDAHIDTLARF
                     ASADSIVYQACDDESDSHYAELQAMGNELAALRTKDGQPYRLFPLPWAQPVIDEGRRL
                     AASYANYLIVNGAVLMPAYGDPADDLARDVLAQAHPGREIVQVPCRSLIWQNGSLHCI
                     TMQLPAGLLKA"
     gene            complement(3949..4278)
                     /locus_tag="QEL58_002491"
     CDS             complement(3949..4278)
                     /locus_tag="QEL58_002491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006430960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676950.1"
                     /translation="MKRYLSALAVMATLAAATPALADTLLVDRAREKPAGALPVRGQS
                     MQQVQAQFGAPSEQLQPRGGQKRQWPTINRWVYPQFTVYFEKQKVIDVVANQADPNEV
                     GPKPPIR"
     gene            complement(4425..4550)
                     /gene="ykgO"
                     /locus_tag="QEL58_002492"
     CDS             complement(4425..4550)
                     /gene="ykgO"
                     /locus_tag="QEL58_002492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011098120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type B 50S ribosomal protein L36"
                     /protein_id="HDS1676951.1"
                     /translation="MKVLSSLKSAKARHRDCKVVRRRGKIFVICKSNPRFKARQR"
     gene            4748..5425
                     /locus_tag="QEL58_002493"
     CDS             4748..5425
                     /locus_tag="QEL58_002493"
                     /EC_number="2.7.4.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(d)CMP kinase"
                     /protein_id="HDS1676952.1"
                     /translation="MNPLAPVLTIDGPSGAGKGTISRIIARRMGWHYLDSGALYRAVG
                     VAASWADIDTSDASALVRCTFDTHVQFVEQGESMRVMVNGTDATDELRLETTGALASA
                     IAAIPEVRAALKERQRAFRELPGLVADGRDMGTVIFPDASYKVFLTASAEERAERRHK
                     QLKDKGVSVNFDDLLREIMARDARDAQRTVAPLKPADDAVLIDTTGIGIADVVARVMD
                     LLPVPAA"
     gene            5624..7309
                     /gene="rpsA"
                     /locus_tag="QEL58_002494"
     CDS             5624..7309
                     /gene="rpsA"
                     /locus_tag="QEL58_002494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019183099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S1"
                     /protein_id="HDS1676953.1"
                     /translation="MTESFAELFEASQANLAKLKPGAIVSGTVVEVRGDVVVINAGLK
                     SEGIVPIEQFRNDAGEIDVAEGDIVKVALDSIENGFGETVLSREKAKRAMVWDELEEA
                     LEKNETITGRISGKVKGGFTVDIKDVRAFLPGSLVDVRPVRDPAYLEGKELEFKLIKL
                     DRKRNNVVVSRRAVVESEHSEEREQLMDKLQEGAILKGVVKNLTDYGAFVDLGGIDGL
                     LHITDMAWKRVRHPSEVVNVGDELDVRVLKFDRERNRVSLGLKQLGEDPWDNIGRRYP
                     ANSRVFGKVSNVTDYGAFVEIEPGVEGLVHVSEMDWTNKNVNPSKVVQVGDEVEVMVL
                     DVDEERRRISLGMKQVAANPWETFAATHKKGDKVSGQIKSITDFGIFIGLDGGIDGLV
                     HLSDISWNTTGEDVVRNFKKGDTLDAVVLAVDPERERISLGVKQLEQDPFGQYMAANP
                     KGSKVEGVVKEVDAKGAIIELADGIEGYVSARDIANERVDDATQHLKVGDKVEAKFVG
                     MDRKGRTLQLSIKAKDDAEMREVLEEYQSSSASSGTTQLGALLRAQLNGNKSE"
     gene            7398..7703
                     /locus_tag="QEL58_002495"
     CDS             7398..7703
                     /locus_tag="QEL58_002495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor subunit beta"
                     /protein_id="HDS1676954.1"
                     /translation="MTKSELIEILARRQAHLKADDVDLAVKSLLEMMGGSLSAGDRIE
                     IRGFGSFSLHYRPPRLGRNPKTGESVALPGKHVPHFKPGKELRERVSSVLPLDADPA"
     gene            7781..8065
                     /locus_tag="QEL58_002496"
     CDS             7781..8065
                     /locus_tag="QEL58_002496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LapA family protein"
                     /protein_id="HDS1676955.1"
                     /translation="MKVFRLLVLLAVLILGLIIGAVNMTAMSINLLFTQLHTSVGVAL
                     IAALLVGVIVGAGLVLVSVVIPLYSQLRRANKSGAATPAAGVSSQSFDGR"
     gene            8072..9250
                     /gene="lapB"
                     /locus_tag="QEL58_002497"
     CDS             8072..9250
                     /gene="lapB"
                     /locus_tag="QEL58_002497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003468665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide assembly protein LapB"
                     /protein_id="HDS1676956.1"
                     /translation="MEFVTEWLWFFLFVPLAAVAGWVIGRRGGQRHGDSQVSRLSSTY
                     FRGLNYLLNEQPDKAIELFLHIAELDKETFETQVALGHLFRRRGEVDRAIRLHQGLVN
                     RHDLSDAQRVQALLALGEDYMKSGLLDRAETVFTELAQLDQRAPQALKHLIGIYQAER
                     DWEKAIDNATRFEDVTGEPMGKLIGQFECELAERFRGAGKLEEARAAIARAYQADAMS
                     VRAGIIEGRLETDAGNAEAAVRAFERAARNDPEYLPELLPALMANYRKVGDLAGARAF
                     LSEMTEHYRGIAPVLALTRLMEEQEGVAPARAYLGRQLKDRPSVRGESALIDLTLAEG
                     ADSTATLHDLKHITDQLLVRNPAYRCTRCGFGARTHHWQCPSCKEWGTVKPLLNYAVL
                     "
     gene            9254..10243
                     /locus_tag="QEL58_002498"
     CDS             9254..10243
                     /locus_tag="QEL58_002498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HDS1676957.1"
                     /translation="MPWFVMGALLGLALLSAALTWAARGYAVRRQLLDQPGERRSHSV
                     ATPRGGGIAIVISLLVTAGVAMVAWPDAAPSLLVASLGLVLVAGIGWWDDHRPLPALR
                     RLLVHFIAAALLAMLVKANGGSWLLAGLVLLFTASLINIWNFMDGINGIAASQAIVVA
                     LGLAPLLPWPYSLAALALGLACLGFLPFNFPQARIFMGDVGSGALGYAVAAVLAIASV
                     RTDINWLLLLVPASAFLVDAGFTLLARIISGQRWMEPHTQHVYQRAVQAGASHARVTG
                     MYFALGLFSITVTVVCSKLQPRWEAVVAIAWFSALSVLWLLLRNGLRHRQGNT"
     gene            10247..12160
                     /locus_tag="QEL58_002499"
     CDS             10247..12160
                     /locus_tag="QEL58_002499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide biosynthesis protein"
                     /protein_id="HDS1676958.1"
                     /translation="MASPWRDRILGLMPRSAIVCHDLFMVWACWQLLHAGRYSILPNA
                     PELPLWNIDTTLVLLLQGLVFWRVGLYRGLWRFASVSDLLNIFKASFIGMVAIVLVLM
                     WKRFDGVPMSVLVIYPFALSALLGAPRLLYRAWKDYQALQSDSSARRVLILGAGQAAE
                     TLVRDLRRSGNFEPVGLLDDAPHLRGAKLQGLPILGTLDDAPTVVRETAAKLLVIAMP
                     SLDAAGMQRIVAICESTGVPFRTVPKLSDILQGQSLPGQLKEVAIEDLLGRKPIMPDW
                     NLIRGWLGGRTVMVTGAGGSIGSELCRQCARHGAGRIILLEISELLLLTIEDELRRSF
                     PDVEIEAVLGDCGDPAVIRHALSLHPVDTAFHAAAYKHVPVLERQLREAVRNNILATE
                     NVARACLEARVEHFVFISTDKAVDPVNALGASKRYAEMICQSLDQKSTHTRFVTVRFG
                     NVLASAGSVVPLFREQILRGGPVTVTDPEVSRYFMTIPEACQLILQAAASASHGAIYT
                     LDMGEPVPIRVLAEQMIRLAGKQPYKDIPIIYTGLRPGEKLHETLFYSDEDYRSTAHP
                     KILEAGVRTFSRDLVLGNVPRLRDAIASYDTASIQEILFATMPEFSPIAQDAYISSAK
                     VLPFPAREANRYQ"
     gene            12157..13035
                     /gene="galU"
                     /locus_tag="QEL58_002500"
     CDS             12157..13035
                     /gene="galU"
                     /locus_tag="QEL58_002500"
                     /EC_number="2.7.7.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017157591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UTP--glucose-1-phosphate uridylyltransferase
                     GalU"
                     /protein_id="HDS1676959.1"
                     /translation="MSKRIRKAVFPVAGLGTRFLPATKTVPKEMLPIIDRPLIQYAVD
                     EAIEAGCDTLVFITNRYKHAVADYFDKAYELEQKLERAGKQEQLELIRHVLPEGVRAI
                     FVTQAEALGLGHAVLCAKAVIGDEPFAVLLPDDLIWNRGAGALKQMADLNEASGASVI
                     AVEDVPHEKTASYGIVATEAFDGRKGRISEIVEKPKPEDAPSDLAVVGRYVLSPKIFE
                     LLEQTGSGAGGEIQLTDAIAQLLKTEEVDAYRFEGTRFDCGTHLGLVEATIRFALDNP
                     KLAGPAREKLAAMLAE"
BASE COUNT         2255 a         4249 c         4500 g         2379 t
ORIGIN      
        1 attctgtggc cggttgaaag gcttacccgg cgaccttgcc ccacaccttg aaggtggtca
       61 gccataggcc gagcatgctg ccgatgttgg tcagcatgaa ggtgagtacc acccgggtga
      121 cgcggttgcg gtaccagccc ttcaggctct gcgcatcgtc gcgcagtttc aggaagtcct
      181 cgtacgccgg tttgcgcagc cgcgcttcca ccagcgccga gaacgcaccg gtcgggatgc
      241 tcaggcggaa cggcttgaac ggggccaccg cgatcgcggt gaggatgctc agcggatggc
      301 cgccggccag caggcagccc aggcccgcca ggccgccggt atacatcgcc caggtcgcca
      361 gcagttcggt acccacgccc agtccaccgc gatagaagcc cacgccgatg ccggtcgcca
      421 cgatggccag gatgcccagc gtgaaccacg gaatgttgcg cttcttcggc accgcctcca
      481 gttccgcgcg cagcggcgcc ggtgcctcgg tgtcggtttc caggtagcgc gccagcccgg
      541 ccaggtggcc ggcaccgacc acggccagca cttcgcgctg ctgcgggtcg tgttcttcgc
      601 gcaggcgcgt ggccatgtag cggtcacgct cgccgatgat ggtctcgtac agcgccgggc
      661 tctcgctggc gaactcgccg aagctcgatt ccagcatgtc gccctgcttg agtttctcga
      721 tctcgttctc gcccacttcc tcggatgaga acaggccggc accgaggccg gcgaccagct
      781 tcagcttgcc gaagaagccc agccgctgcg atgcgcggcg gaaggtcagg cccacctcgc
      841 ggtcgatcag gtgcaccggc aggttgcgct cacgcgccag ttccaccgca cgcttgagtt
      901 ccgcgcccgg ctcgatgtcg agctgttcgg ccaggcggcg ctggtaggcg gacaaggcca
      961 ggttggcggc gaacagcgcc acccggccct tgcggatcac ctcgaccagg tcgagcttgg
     1021 ccagcgtgtc cgggtcgctc agcgcctgca ggcgctgcgg gtccagctcg acggccactg
     1081 catcgaagcg gccgctgtcg atggcctttt ccacggcttc gacgctggcg cgggagacgt
     1141 gggcagtgcc cagcagggtg tagcgcacgc cgtcacgttc gacgacacgc accggctggc
     1201 cggcgaacag gtcgtcgccg gtctcgggaa gggtttcagt catgggttca ttcattggaa
     1261 ggtgcggtgt cagcgccatc gccgagcgcg cgctgcatct gcacggtgtc cagccagcgg
     1321 ccgtgcttgc ggcccaggcc cttgaaaacg cctaccaggt gaaagccgaa gcgttcgtgc
     1381 agcttgatcg aagcggtgtt ggtcggttca ccgatcaccg ccaccatctg ccggtagccg
     1441 cgcgccacgc aggcatcgat gagggcctgc agcaggccgg tgcccacgcc cttgccctgg
     1501 aaacgggcat cgacgtagac cgaattctcg acggtccact ggtaggccac gcgggtgcgg
     1561 taggtgttgg cgtaggcata gccggccacc tggccgtcga tctcggcgac cagatagggg
     1621 aagccacggt cgatgatgtc gcgcatgcgg cgcagcatct cggtcgcgtc cggaatgtcg
     1681 tactcgtagg tgttgacgaa gtcggtcact tccaccgcgt agatcgcggt gatcgcgtcg
     1741 atgtcggccg ggccggcatc acggatgagg acggccatgc gcgggctccg gctcagtcga
     1801 tgtagcgctt gagcaggtcg ccgtacgcat cgatgcggcg atcacgcagg aatggccaga
     1861 tgcggcgcac gtgctcgctg cgctgcaggt ccacatcgca cagcagcacg gtggcgtcgg
     1921 tgccggcctc ggccaggaat tcgccctgcg ggcccagcac gtggctgttg ccccagaact
     1981 ggatgcccga ggcgcccagc ggcgaggctt cgtggccgac gcggttgcag ctcagcaccg
     2041 gcagaccgtt ggccacggca tggccgcgat ggctcagcac ccaggcgtca cgctggcggg
     2101 tcttctcgtc ctgcacgtcg tccgggtccc agccgatcgc ggtggggtag agcagcagtt
     2161 cggcaccggc cagcgccatc aggcgcgccg cttcggggta ccactggtcc cagcagacca
     2221 gcacgccgag gcggcccacc gaggtgtcga tcggggtgaa cccgatatcg cccggggtga
     2281 agtagaactt ctcgtagaag cccggatcgt ccgggatgtg catcttgcgg tacttgccga
     2341 gcagggtgcc gtccttctcg aacaccacgg cggtgttgtg gtacaggccg gcggcgcggc
     2401 gctcgaacag cgaaccgacc agcaccacgc catgcttctt cgccagcgcg cccaggcgct
     2461 cggtgctggg gcccggaatc ggctcggcca ggtcgaactc gtccaccgac tcgtgctggc
     2521 agaagtacgg gccgttgtgc agttcctgca gcagcaccag cttggcaccc tgcgcagccg
     2581 cctcggccac gcgtgcttcg atcaccgcca gattggcggc ggcgtcaccg tggttgcgct
     2641 cctggatcag ggcgacggta agagggctgc gcgagttcat gcggggcgtt cctgcgggga
     2701 aaacctgcat gttagcgcgg atggatggcg acggcgtgtt gcgcgctgaa tgggccgccc
     2761 tttgtagagt cgagccatgc tcgactgctc tccggtcaga tcgcgcggaa agccagtcga
     2821 gcatggctcg actctacagg gagagcgccg ggcggggccc ggcggcatcc gttacgcctt
     2881 caacaacccc gccggcagct gcatggtgat gcagtgcagg ctgccgttct gccagatcag
     2941 cgagcggcag ggcacctgca cgatctcgcg gcccgggtgt gcctgcgcca gcacgtcgcg
     3001 cgccaggtcg tcagccgggt cgccataggc cggcatcagc accgcgccat tgacgatcag
     3061 gtagttggcg tacgacgcgg ccaggcggcg gccttcgtcg atcaccggct gtgcccacgg
     3121 cagcgggaac aggcggtacg gctggccatc cttggtgcgc agcgcggcca gttcgttgcc
     3181 catcgcctgc agctcggcat agtgcgagtc gctctcgtcg tcgcaggcct ggtagacgat
     3241 gctgtcggcc gaggcgaagc gggcgagggt gtcgatgtgg gcgtcggtgt cgtcgccttc
     3301 caggtagccg tggtccagcc acagcacgcg gtcctgctgc agccagtcgg ccaggtcggc
     3361 actcaggctg gcgcggtcgc ggtccgggtg gcgctcgtgc aggcacttcc aggtggtcag
     3421 cagggtgcct tcgccgtcgg tctcgatgcc gccgccctcc agcgcgaacg ggatgctgcg
     3481 caccggtgcg tcgttgaaca cgccggcctg gtcgagcacg cccaccagct ggtcatccag
     3541 ggtggcgtcg aacttgccgc cccagccggt gaagcggaaa tccagcagct ggaagccgcc
     3601 atcagcgcgg cgcagggtga tcgggccgga gtcgcgcagc caagtgtcgt cgtaggccgc
     3661 cgtggtgaag tggaccttgt ccatgtcgat gcggttggag cgcagccgca tctcggcata
     3721 ggtctccacg tcgtcgtcgg ccacgcagat cagcaccggc tggaagcggg tgatggccgc
     3781 gaccagggcg atgtaggtct cttccacctg gcccaggcgc tcggcccagt cggtgtcggc
     3841 ggtgggccag gcaatcagga cgccgctctg ggcttcccac tcggcaggaa aacgaagggt
     3901 ctggttcatg gtctcgctac acaggcccgc ccacggcggg taaagggatc aacggatcgg
     3961 cggtttcggg ccgacttcgt tcgggtccgc ctggttggcc accacgtcga tcaccttctg
     4021 cttctcgaag tagacggtga actgcgggta gacccagcgg ttgatggtcg gccattgccg
     4081 cttctgcccg ccgcgcggct gcagctgttc gctcggcgcg ccgaactgtg cctgcacctg
     4141 ctgcatgctc tggccgcgca cgggcagggc accggccggc ttctcgcggg cacggtcgac
     4201 aagcagggta tcggccagcg ccggagtggc ggcagccagg gtggccatca cggccagggc
     4261 ggacaggtaa cgcttcatct cgatctactc cccagtggtc aagaacggcg attacagcaa
     4321 aatcggcagg aaaaagccgc ataaaacaaa aaaccgcccg aaggcggttt cttgcatcgg
     4381 gtcggccccg cgtagggcca gccgcagccg gaaggctgtg aggcttagcg ctgacgcgcc
     4441 ttgaaacgcg ggttcgactt gcagatgacg aagatcttgc cacgacgacg cacgaccttg
     4501 cagtcacggt gacgggcctt cgccgacttc agggaggaca ggactttcat ggcatacctc
     4561 ggcgtaaaca gtagttgttc gggtggagcg tggccgcgat atgcgaaaga caatcggcag
     4621 ttgacgctcg ttcaagcccg ccattctacc gggcttttcc tcatggtttc aagtggttgc
     4681 acaaaagatc ccgctggggg cgtcgggcag gggctagaat gaccccttcg aacgctctgg
     4741 gaaccccatg aatccactcg ctcccgtcct gaccatcgac ggcccttccg gggctggcaa
     4801 gggtaccatc agccgcatca tcgcgcgccg gatgggctgg cattacctgg attcgggcgc
     4861 gctgtaccgg gcggtgggcg tggctgcgag ctgggccgac atcgatacct ccgacgcgtc
     4921 ggccctggtg cgctgcacct tcgataccca cgttcagttt gttgaacagg gcgagtcgat
     4981 gcgggtcatg gtgaacggta ccgatgccac cgacgagctg cgcctggaga ccaccggggc
     5041 gctggcctcg gccatcgcgg ccattcccga ggtgcgggct gcgctgaaag agcgccagcg
     5101 cgcattcagg gagctgcccg gcctggtcgc cgacggccgc gacatgggca cggtgatctt
     5161 cccggacgcc tcctacaagg tcttcctgac cgccagtgcc gaggagcgcg ccgagcgccg
     5221 gcataagcag ttgaaagaca agggggtttc tgttaacttt gatgacctcc tgcgcgagat
     5281 catggcccgc gacgcccgtg atgctcagcg taccgtggcg cccctgaagc cggcagacga
     5341 tgctgtcctc atcgacacca caggcatcgg catcgcagat gtcgttgcca gagtgatgga
     5401 tctgcttccg gttccggctg cctgatccgt tcgcgcggga gcactgccag cagcatcggt
     5461 ggtggtcgcg catagcagtg ctgtaccagc tccgtcgcgc aatgatgcgt ggcggttttc
     5521 ctactacaca cgacctgcgt ttccggggtc gaccaacagg cgggcggtcg ccatttccct
     5581 gaaggggacg ccaccgaccc atgtgtccaa cagagtaaat ctaatgaccg aatcatttgc
     5641 cgaactgttt gaagccagcc aggccaacct ggccaagctg aagccgggcg ccatcgtcag
     5701 cggtaccgtt gttgaagtcc gcggcgacgt cgtggtgatc aacgctggcc tgaagtccga
     5761 aggcatcgtg ccgatcgaac agttccgtaa cgacgctggc gaaatcgacg tcgccgaagg
     5821 cgacatcgtc aaggtcgccc tcgactcgat cgagaacggc ttcggcgaaa ccgtcctgtc
     5881 gcgcgagaag gccaagcgcg cgatggtgtg ggacgagctg gaagaagcgt tggaaaagaa
     5941 cgaaaccatc accggccgca tcagcggcaa ggtcaagggt ggtttcaccg tggacatcaa
     6001 ggatgtccgc gccttcctgc cgggttccct ggtcgatgtg cgcccggtgc gcgatccggc
     6061 ctacctggaa ggcaaggaac tcgagttcaa gctcatcaag ctggaccgca agcgtaacaa
     6121 cgtcgtggtc tcgcgccgcg ctgtcgtcga aagcgagcac tcggaagagc gcgagcagct
     6181 gatggacaag ctgcaggaag gcgcgatcct gaagggtgtc gtcaagaacc tgaccgacta
     6241 cggcgcgttc gtggacctgg gcggtatcga cggcctgctg cacatcaccg acatggcgtg
     6301 gaagcgcgtg cgtcacccgt cggaagtcgt gaacgtcggc gacgagctgg acgtccgcgt
     6361 gctgaagttc gaccgcgagc gcaaccgcgt ttcgctgggc ctgaagcagc tgggcgagga
     6421 tccgtgggac aacatcggtc gtcgttaccc ggccaacagc cgcgtcttcg gcaaggtctc
     6481 caacgtcacc gattacggcg cgttcgtcga gatcgagccg ggcgtcgaag gcctggtgca
     6541 cgtctccgag atggattgga ccaacaagaa cgtcaacccg tccaaggttg tgcaggtcgg
     6601 tgacgaagtt gaagtcatgg tcctggacgt cgacgaagag cgtcgccgta tctcgctggg
     6661 catgaagcag gttgccgcca atccgtggga aaccttcgct gccacccaca agaagggtga
     6721 caaggtgtcg ggccagatca agtcgatcac cgacttcggc atcttcatcg gcctggacgg
     6781 cggcatcgac ggcctggtcc acctgtccga catcagctgg aacaccaccg gcgaagacgt
     6841 cgttcgcaac ttcaagaagg gcgataccct ggacgccgtc gtcctggctg tcgatccgga
     6901 gcgcgagcgc atctccctgg gcgtgaagca gctggagcag gatccgttcg gccagtacat
     6961 ggctgccaat ccgaagggct ccaaggtcga aggcgtggtg aaggaagtcg acgccaaggg
     7021 cgcgatcatc gagctggctg acggcatcga aggttacgtc tcggcacgcg acatcgccaa
     7081 cgagcgcgtt gacgacgcca cccagcacct gaaggtcggc gacaaggtcg aagccaagtt
     7141 cgtgggcatg gaccgcaagg gccgtaccct gcagctgtcg atcaaggcca aggacgacgc
     7201 ggaaatgcgc gaagtgctgg aggaatacca gtcctcttcg gcttccagcg gcaccaccca
     7261 gctgggcgcg ctgctgcgtg cacagctgaa cggcaacaag tccgagtaat cggccttacg
     7321 ctgtacgttg tttcctggac ggcccgggcg tttgccgggg ccgtttcagg ctgagatgcc
     7381 cctgatgtga gccggtgatg accaaatccg aactgatcga aatccttgcg cgccgccagg
     7441 cgcacctgaa ggccgatgat gtcgatctgg cggtgaagtc gttgctggaa atgatgggcg
     7501 gttcgctgtc cgccggggat cgcatcgaaa ttcgtggttt cggcagcttc tcgctgcact
     7561 atcgtccgcc gcgcctgggt cgcaacccga agaccggcga atcggttgcc ctgccgggca
     7621 agcatgttcc ccatttcaag ccgggcaagg aactgcgcga gcgggtcagc agtgtgctgc
     7681 cgctggacgc tgatccggcc tgagcctccc gtcgcgccac cgcgtgcgaa tcaagccgcg
     7741 agtcggataa gctacggact cctgccactg gagctctcgc atgaaggttt ttcgtctgct
     7801 ggtcctgctg gcggtcctga tccttgggct gatcatcggt gcggtcaaca tgaccgcgat
     7861 gtcgatcaac ctgcttttca cccagttgca tacttcggta ggcgtggcgc tgatcgctgc
     7921 actgctggtg ggtgtcatcg tcggtgccgg tctggtgctg gtaagcgtgg tcattccgct
     7981 ctacagccag ctgcgccgtg ccaacaagtc cggggcggcg acgccggccg cgggtgtttc
     8041 ctcccaatct tttgacggac gctgatcgaa gatggaattc gtcaccgagt ggctgtggtt
     8101 tttcctgttc gtcccgttgg ctgcagtagc gggatgggtg atcggtcggc gcggcgggca
     8161 gcgtcacggt gacagccagg tcagccgcct gtcgagcacc tacttccggg gcctgaacta
     8221 cctgctcaac gagcagccgg acaaggccat cgagctgttc ctgcatatcg ccgagctgga
     8281 caaggaaacc ttcgagaccc aggtcgcgct cggccacctg ttccgccgcc gcggcgaagt
     8341 cgaccgcgcc atccgcctgc accagggcct ggtcaaccgc cacgatctga gtgatgcgca
     8401 gcgcgtgcag gccctgctgg cgctgggcga ggactacatg aagtccggcc tgctggaccg
     8461 tgccgagacc gtgttcaccg aacttgcgca gctggaccag cgcgccccgc aggcgctcaa
     8521 gcacctgatc ggcatctacc aggccgagcg cgactgggaa aaggcgatcg acaacgcgac
     8581 ccgtttcgag gacgtgaccg gcgagccgat gggcaagctg atcggtcagt tcgagtgcga
     8641 gctggccgag cgcttccgtg gcgccggcaa gctggaagag gcgagggcag cgatcgcccg
     8701 tgcctaccag gccgatgcga tgtcggtgcg cgcgggcatc atcgagggtc gcctggagac
     8761 cgatgccggc aacgccgaag ccgcggtgcg cgcgttcgag cgcgcggccc gtaacgatcc
     8821 ggagtacctg cccgagctgc tgccggcgct gatggcgaac tatcgcaagg tcggtgacct
     8881 cgcgggcgcg cgtgccttcc tgtcggaaat gaccgagcac tatcgcggca tcgccccggt
     8941 actggcgttg acccggctga tggaagagca ggaaggcgtg gcaccggccc gtgcctacct
     9001 ggggcgccag ctgaaggatc gcccgtcggt gcgtggcgag tccgcactga tcgacctgac
     9061 cctggccgag ggtgccgact ccaccgccac cctgcacgac ctcaagcaca tcaccgatca
     9121 gttgctggtg cgcaacccgg cctaccgctg cacccgctgc ggtttcggtg cgcggacgca
     9181 tcactggcag tgcccgagct gcaaggagtg ggggacggtc aagccgctgc tgaactacgc
     9241 ggtgctctga tccatgccgt ggttcgtgat gggggcgctg ctggggctgg ccctgctgag
     9301 cgcggccctg acctgggccg cccgcggtta cgccgtgcgc cggcagttgc tggaccagcc
     9361 cggcgagcgc cgcagccata gcgtggcgac accgcgcggc ggtggtatcg ccattgtcat
     9421 cagcctgctg gttacggcgg gcgtggccat ggtggcctgg ccggacgccg cgccaagcct
     9481 gctggtcgcc agccttggcc tggtcctggt ggccggcatc ggctggtggg acgaccacag
     9541 gcccctgcct gccctgcgcc gcctgctggt gcatttcatt gcggcagcgc tgctggccat
     9601 gctggtcaag gccaacggtg gcagctggct gctggccggg ctggtgctgc tgttcaccgc
     9661 ctcgctgatc aacatctgga acttcatgga tgggatcaac ggcattgccg ccagccaggc
     9721 gattgttgtc gcattgggac tggcgccgct tctgccctgg ccctattcgc ttgcggccct
     9781 ggcattgggc ctagcctgcc tgggcttcct gccgttcaat tttccgcagg cgcggatctt
     9841 catgggtgat gtcggaagtg gcgcgttggg ctatgcggtg gcggccgtgc tggccatcgc
     9901 cagcgtgcgc acggacatca actggctcct gctgctggtg ccagcctcgg ctttccttgt
     9961 ggacgcaggc ttcacactgc tggcgcgcat catttccgga caacgctgga tggaacccca
    10021 tacccagcat gtctaccaac gcgcggtgca ggcaggagcc agccacgccc gggtgacagg
    10081 gatgtacttt gctttgggcc tgttcagtat tacagtgact gttgtctgct ccaaattgca
    10141 gccgaggtgg gaggctgtcg tggcgatcgc gtggttcagt gcgctgagcg tcctctggct
    10201 cctcctgcgc aatggattgc gccatcgaca aggaaatacc tgacttatgg cttcaccctg
    10261 gcgggacaga atcctcggcc tgatgccgcg ttcggccatc gtctgccacg acctgttcat
    10321 ggtctgggca tgttggcagc tgctccacgc agggcgctac tcgatcctgc ccaacgcgcc
    10381 cgagcttccc ctctggaaca tcgacaccac actggtactg ctgctgcagg gcctggtgtt
    10441 ctggcgcgtc ggcctctacc gcggactgtg gcggtttgcc agcgtcagcg acctgctgaa
    10501 catcttcaag gccagcttca tcggcatggt cgcgatcgtg ctggtactga tgtggaagcg
    10561 cttcgatggc gtgccgatgt cggtgctggt gatctatccg ttcgcgctgt cggccctgct
    10621 gggcgcgcca cgcttgctgt accgggcctg gaaggactat caggcgctgc agtccgattc
    10681 cagcgcacgt cgcgtgctga tcctcggcgc gggccaggcg gctgagacgc tggtgcgtga
    10741 cctgcggcgc tcgggcaact tcgagccggt cggcctgctc gacgacgccc cccatctgcg
    10801 cggggccaag ctgcagggcc tgcctatcct tggcaccctg gacgacgcgc ccaccgtggt
    10861 ccgcgagacc gcggccaagc tgctggtgat tgccatgccc tcgctggatg ccgccggcat
    10921 gcagcggatc gtggccatct gtgaaagcac gggcgtgccg ttccgcaccg tgcccaagct
    10981 cagcgacatc ctgcagggcc agtcgcttcc cgggcagttg aaggaagtgg cgatcgaaga
    11041 tctgctcggc cgcaagccga tcatgccgga ctggaacctg atccgtggct ggttgggtgg
    11101 acgtacggtg atggtgaccg gggccggtgg ctcgatcggc tcggaactgt gccgccagtg
    11161 cgcgcgccat ggtgctggcc gcatcatcct gctggagatc agcgagttgt tgctgctgac
    11221 catcgaggac gaactgcgcc gcagtttccc ggatgtcgag atcgaagccg tgctgggtga
    11281 ctgtggtgac ccggccgtga tccgccacgc actgtcgctg catccggtgg atacggcgtt
    11341 ccatgcggcg gcctacaagc atgtgccggt gctggagcgc cagctgcgtg aagcggtgcg
    11401 caacaacatc ctggcgaccg agaacgtggc ccgggcctgc ctggaggcgc gcgtcgagca
    11461 tttcgtcttc atctccaccg acaaggcggt ggacccggtc aatgcgctgg gtgccagcaa
    11521 gcgctacgcc gagatgatct gccagagcct ggaccagaag tccacgcaca cccgtttcgt
    11581 caccgtgcgt ttcggcaatg tgctggcctc ggccggcagc gtggtgccgc tgttccgcga
    11641 gcagatcctg cgcggtgggc cggtgaccgt taccgatccg gaagtcagcc gctacttcat
    11701 gaccatcccg gaggcctgcc agctgatcct gcaggcggcc gcgtcggcat cgcacggtgc
    11761 gatctatacc ctcgacatgg gcgagccggt gccgatccgc gtgctggccg aacagatgat
    11821 ccgcctggcc ggcaagcagc cgtacaagga cattccgatc atctataccg gcctgcgccc
    11881 gggcgagaag ctgcacgaga cgctgttcta ttcggatgag gactatcgct caaccgcgca
    11941 cccgaagatt ctcgaggccg gcgtgcgcac gttctcgcgc gatctggtgc tgggcaatgt
    12001 cccgcgcctg cgcgacgcga ttgccagcta cgacactgcc agcatccagg agatcctgtt
    12061 tgcgaccatg ccggagtttt cgccaatcgc acaggatgct tacatttcat ccgctaaagt
    12121 cctgcccttt ccggcacgtg aggccaacag gtaccaatga gcaagcgaat ccgcaaagcg
    12181 gttttcccgg tggcagggct ggggacgcgt tttctgccag caaccaagac cgtgccgaag
    12241 gagatgctgc cgatcattga tcggccgctg atccagtacg ccgtggatga agccatcgag
    12301 gccggctgcg atacgttggt gttcatcacc aaccgctaca agcatgcagt tgccgactat
    12361 ttcgacaagg cctacgagct ggaacagaag ctcgagcgcg ccggcaagca ggagcagctg
    12421 gaactcatcc gccacgtgct gcccgaaggc gtccgcgcga tcttcgtgac gcaggccgaa
    12481 gcactgggcc tggggcatgc ggtgctctgc gccaaagccg tgatcggtga cgagccgttc
    12541 gccgtgctgc tgccggacga cctgatctgg aaccgcggtg cgggtgcgct caagcagatg
    12601 gccgatctca acgaggccag tggtgccagc gtgatcgccg ttgaagacgt gccgcacgaa
    12661 aagaccgcca gctacggcat cgtggccacc gaggcctttg atggccgcaa gggtcgcatt
    12721 tcggagatcg tggagaagcc aaagccggag gacgcgccga gcgacctggc ggtggtgggc
    12781 cgttatgtgc tgagcccgaa gattttcgag ttgctggaac agaccggcag cggtgccggt
    12841 ggtgagatcc agctgaccga tgcgatcgcg cagctgctga aaaccgaaga ggtcgatgcc
    12901 tatcgattcg agggcacccg cttcgattgc ggtacgcacc tggggctggt ggaggcgacg
    12961 atccggttcg cgctggataa cccgaagctg gctggcccgg cgcgcgagaa gctggcggcg
    13021 atgctggcgg aataagattt atcaagcgct ccgtcagcgc cttcctccca aagtggggag
    13081 gcgtgggcag tccgctgcag gacacgccgt aaacccatcc ctgggggctc gatggcgcca
    13141 tccatggcgc caacggtcct gcagcggact gcccacgcct ctcgacagtt tcctgcgggc
    13201 gcggacggga agggcggaat caaaggcaga agcaaaagca aaaaggcagc cagtggctgc
    13261 cttttttgct tgctggggtc agatcccttt gctgcgcaaa gggctctgac cccagctctt
    13321 gatcctgcct ttgctcaccc ctccgccgca gggaggctgg aagggccggg tcggcagggc
    13381 tgc
//
LOCUS       DAOKIP010000107        13211 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.107,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000107 DAOKIP010000000
VERSION     DAOKIP010000107.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 13211)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13211)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13211
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.107"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(3..2462)
                     /gene="rnr"
                     /locus_tag="QEL58_002501"
     CDS             complement(3..2462)
                     /gene="rnr"
                     /locus_tag="QEL58_002501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019336962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease R"
                     /protein_id="HDS1676960.1"
                     /translation="MTTKKPSKGGSKSRSQAPKKGAKAGAARTTKPGKPLPGWFPELN
                     EGGAPPRGRKRHGDDAPGPAPGRKLPPTGKVIDDPYAAREAEKYEQPIASREAILALL
                     ERCEGPQTAEELGARLGLGAPDRAEALSRRLGAMVRDGQLVQNRRGGFAPIQTLNLVT
                     GVVIANPEGFGFLRPVEGGDDLFLPPYEMRKVMHGDKVLARVTGIDHRGRREGSIARV
                     LERGMTRLIGRFSVEMGINYVVPDDKRVQRNVQVPPDQTGGARDGQLVVCELTQAPDS
                     RRPPIGRIIAVLGDKLTASLVVETAIHGHELPFEFPQEVLDEAASVPLVVEPSMIGDR
                     VDLRSTPLVTIDGEDAKDFDDAVYCEPNADGFRLVVAIADVSNYVRPGTPLDEEAQKR
                     ATSVYFPGFVVPMLPETLSNGICSLMPKVDRMCFVCDMQIDRDGLVTHSRFYEAVMNS
                     HARLTYTQVWKAVGEDDADTKAWMGDLLPQVQRLHQLYKVLSKARAKRGAIEFESSEV
                     RFVLDNRGEVTQAGMLVRNDAHKLIEECMIAANVEAAKYLLSRHVPAPYRIHEKPPET
                     KYADLLEFLKEFKLSLPPWSKVRPGDYTKLLKKIRDRPDATLLESVLLRSQSLAIYSP
                     DNHGHFGLALEAYAHFTSPIRRYPDLLVHRAIKHALSGKPLDKFTYNAREMAALALQC
                     SERERRADEAEREVDERYRAAWMEKHVGGQFDGVISGVTSFGLFVELDESKVQGLVHV
                     TQLPQDYYKFDATRKTLTGERRGSSYRLGDRVRILVLKASMEERKIDFRLVEHKGEDE
                     GDGLPPLPERGKPAKRTKKQY"
     gene            2591..2675
                     /locus_tag="QEL58_002502"
     tRNA            2591..2675
                     /locus_tag="QEL58_002502"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2625..2627,aa:Leu,seq:cag)
     gene            2830..2914
                     /locus_tag="QEL58_002503"
     tRNA            2830..2914
                     /locus_tag="QEL58_002503"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2864..2866,aa:Leu,seq:cag)
     gene            complement(3101..3847)
                     /locus_tag="QEL58_002504"
     CDS             complement(3101..3847)
                     /locus_tag="QEL58_002504"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HDS1676961.1"
                     /translation="MNESMYFYVLLVVVFVLAGVVKGVTGMGLPTVAMGLLGGALSPV
                     AAASMLFIPTFVTNAWQLVSGPSLGHIVRRLWPMMLAVVVVTLGAAALLVRVDRTWSR
                     MALGVALVVYAAYALLAPVFRVPQQCERWLGPLVGALSGVVTGATGVFVMPAVPYLQS
                     LGLQREELVQALGLAFTVSTISLTTGLVLHGAFGIQQLGLSALAVIPALLGMWLGQLI
                     RQRISARVFRACFLGFLLLLGLELVLRPFF"
     gene            3947..4846
                     /locus_tag="QEL58_002505"
     CDS             3947..4846
                     /locus_tag="QEL58_002505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014036531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDS1676962.1"
                     /translation="MRMDIADLRLFLAIAEAGSITAGAAQANLALGSASERLRTIEAD
                     AGTALLNRHPRGVSLTEAGAALAHHARLILRQQAQLRGELQAFAHGARGTLHLYANTA
                     ALTNYLPARLAPWLAERPRLHVELLERTSPEVVRAISTGQAEAGIISDAVDAAGLQQH
                     VVAEDPLVMLLAADHRLASRRSVAFADVAGETFVALADGNALQTYIEDQARDIGRRLD
                     VRIRMKTFEGVCIMVGHGIGVGIVPRTIARQHRRSTHTVAVPLADAWAQRRLCACFAE
                     WTQLSPAMRSLLHHLGVQPQKKA"
     gene            4897..4983
                     /locus_tag="QEL58_002506"
     tRNA            4897..4983
                     /locus_tag="QEL58_002506"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:4931..4933,aa:Leu,seq:cag)
     gene            complement(5134..6723)
                     /gene="emrB"
                     /locus_tag="QEL58_002507"
     CDS             complement(5134..6723)
                     /gene="emrB"
                     /locus_tag="QEL58_002507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005408769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter permease
                     subunit EmrB"
                     /protein_id="HDS1676963.1"
                     /translation="MSAQAPAAPGAPGAPAAPGAASGFLPPSVALCTVGLAMASFMQV
                     LDTTIANVSLPTIAGNLGASSQQATWVITSFAVSTAIALPLTGWLSRRFGERKLFVWA
                     TLAFVITSLLCGLAQSMGMLVVSRALQGFVAGPMYPITQSLLVSIYPREKRGQALALL
                     AMITVVAPICGPILGGWITDNYSWEWIFLINVPLGIFAALVVGNQLKGRPEQIEKPKM
                     DYVGLITLVIGVGALQLVLDLGNDEDWFSSMKIVVLACVAVVALTVFLIWELTDKDPI
                     VDLKLFRHRNFRAGTLAMVVAYAAFFSVALLIPQWLQRDMGYTAIWAGLATAPIGILP
                     VIMTPFVGKYASRFDMRMLATVAFIVLSMTSFLRSNFNLQVDYMHVAGVQLIMGIGVA
                     LFFMPVLQILLSDLDGREIAAGSGLATFLRTLGGSFAASLTTWLWARRTQVHHADLTE
                     HISAYQPGMQDQVAAMGQGDLQHGAAVLNNMINHQASQMGFNDIFFLLGWIFLAIIAF
                     LWLAKPPFGAGAGAASAGGGH"
     gene            complement(6731..7912)
                     /gene="emrA"
                     /locus_tag="QEL58_002508"
     CDS             complement(6731..7912)
                     /gene="emrA"
                     /locus_tag="QEL58_002508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005408768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter periplasmic
                     adaptor subunit EmrA"
                     /protein_id="HDS1676964.1"
                     /translation="MSQTQDTAAPAASNRRGNLLRGLFVIVVLLLAALALWYFMFGRW
                     FEETDDAYVQGNQVQITPLVAGTVVAINADDGMRVERGQLLVQLDPSDTSVALQQAEA
                     NLAKTVRQTRGLYRSVEGAQADLNARQVTLKRVRDDFARRKDLAATGAISNEELAHAR
                     DELAAAEAAVAGSRETVERNRALVDDTVIATQPDVQAAAAQLRQAFLNNARAGIVAPV
                     TGYVARRSVQVGQRVQPGNALMAVVPTEQMWVEANFKETQLRHMRLGQEVELKSDLYA
                     GDVKYKGRIQSLGLGTGSAFSLLPAQNASGNWIKIVQRVPVRIAIDAKQLAEHPLRIG
                     LSMKAEVSLRDQKGEVLPSAAAKGTVFDTDVYAKQLHDADEVIHTIIQGNLPQQQAKV
                     G"
     gene            complement(7924..9417)
                     /gene="emrC"
                     /locus_tag="QEL58_002509"
     CDS             complement(7924..9417)
                     /gene="emrC"
                     /locus_tag="QEL58_002509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012479624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux transporter outer membrane
                     subunit EmrC"
                     /protein_id="HDS1676965.1"
                     /translation="MNPIPHPTLRRSGRALLVSALALALAACASSRGLTPQGHVLEVD
                     SLHSERTLADTDLSATGFPAQDWWKALGDAQLDALVAEGLAGHPSLDAADARLRQAQA
                     QVGTARADQLPSLSVSGGYTGLRLPESMVGSEMGGRYGGSSQVAFDFSYGVDLWGGKR
                     AAWEAAVDGAHAATVEAQAARLNLSTGIAQAYADLAYAWQLNDVAEEELTRSQKSLQL
                     TRQRRSAGIDSDLQVRQAEARVPAAQQQVLAAQQRIDAARTALAALVGKGPDRGLSIQ
                     RPQPLNPMALQLPGVLPSELLGRRPDIVAARWRVEAADKQIKVARTKFYPSFNLTALA
                     GVVAPNVGDLLKSSSTFAYIGPALSLPIFEGGKLRANLANTDAQYDLAVANYNQAVLD
                     ALRDVADQVNAVRSLAQQAHAQQQAVDTARSAFDLAQQRYRAGIGSYLDVLTAQSTLL
                     QSQQQLAGLQSQQVQTSVRLSKALGGGFQPADADRAPIASHSDSSHS"
     gene            complement(9414..9857)
                     /gene="emrR"
                     /locus_tag="QEL58_002510"
     CDS             complement(9414..9857)
                     /gene="emrR"
                     /locus_tag="QEL58_002510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005415875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux system transcriptional
                     regulator EmrR"
                     /protein_id="HDS1676966.1"
                     /translation="MICPATTPPSFGLLLRQVRDGLVRQLDASMAEEDLGIGFTHYIG
                     LKVLSHMAPCTANELAQAIDQVPSAVTRLLDKLEALGCVRREPHAQDRRALQIVLTDE
                     GRALWARLKLRGDAVMDYALRDLSADERTLLLSLLTRIRDSLTTP"
     gene            10030..10911
                     /locus_tag="QEL58_002511"
     CDS             10030..10911
                     /locus_tag="QEL58_002511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDS1676967.1"
                     /translation="MMNKAEIPPPKRLLRDDALDWFERNDGPPVVAFRFDSPQGLVRE
                     VDWHHHQRAQLICVERGLLTTRTSHGTWSLAPGSAGWMPPLEPHTVTLDGPLRGWGMA
                     LAAPACSTLPSDPCVLGLSKLAQALADRICEWPLGYATTPERQHIIDVLLDEIRTAPR
                     QRMHLPMPHDRRLLKIASQLLADPSDERSLAEWAHWAGLSPRSLTRHFRDETTLSFAQ
                     WRQQARLSEALRQLTDGRSVADIAHALGFSSASAFVTVFRRHFGLPPGRYLARAGHGL
                     ETGLDPARGLASPAASG"
     gene            10972..>13211
                     /gene="parC"
                     /locus_tag="QEL58_002512"
     CDS             10972..>13211
                     /gene="parC"
                     /locus_tag="QEL58_002512"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003483492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit A"
                     /protein_id="HDS1676968.1"
                     /translation="MTELARPVFHGFEQLPLREYAERAYLDYSMYVVLDRALPFIGDG
                     LKPVQRRIIYSMSELGLNAASKPKKSARTVGDVIGKYHPHGDSACYEALVLMAQPFSY
                     RYPLIEGQGNFGSSDDPKSFAAMRYTESKLTPIAEVLLGELGQGTTDWAPNFDGTLQE
                     PTWMPARLPHLLLNGTTGIAVGMATDVPPHNLNEIVSALLHLLDNPEASVRDLCEHVQ
                     GPDYPSSAEIITAASDLRNMYETGNGSVRARATFTKEANNIVVTALPFQVSPSKVIEQ
                     IAAQMRAKKLPWLEDIRDESDHANPVRVVLVPRSNRVDAEQLMGHLFATTDMERSYRV
                     NLNVIGLDGRPQVKNLKMLLSEWLTFRSNTVTRRLQHRLQKVERRLHLLEGLLVAFLN
                     LDEVIHIIRTEDEPKAALIARFGLSDDQAEYILETKLKQLARLEEMKIRGEQDELAKE
                     REKILGILDSKAKLKKLIRDELTADAKKFGDARRSPLVQRHAAQAIDETELVPSEPMT
                     VVLSEKGWIRAAKGHDVDASALSYRDGDALQGAVRARSTQQVAFLDSEGRAYSTPVHT
                     LPSARGNGEPLTGRFSPAPGTRFVTLASAEPDTRFVLASSHGYGFVTRFENLIGRNKA
                     GKAMLNLSAGSSVLIPSVVANVATDRIVAVTSSGNLLAIAANDLPELDKGKGNKIIEI
                     PKAKLATERVVAIVAISPGQTLQVRSGQRTMGLKFNELDAYLGARATRGHLLPRGWQK
                     VEGLSV"
BASE COUNT         2238 a         4543 c         4312 g         2118 t
ORIGIN      
        1 tttcaatact gcttcttggt gcgcttggcc ggcttgcccc gctcgggcag cggcggcagc
       61 ccgtcgccct cgtcctcgcc cttgtgctcg accaggcgga agtcgatctt gcgttcttcc
      121 atgctggcct tcagcaccag gatgcgcacg cggtcgccca gccggtaact gctgccacgg
      181 cgttcgccgg tcagcgtctt gcgggtggcg tcgaacttgt aatagtcctg cggcagctgg
      241 gtgacatgca ccaggccctg caccttcgac tcgtccagtt ccacgaacag gccgaagctg
      301 gtcacgccgc tgatcacgcc gtcgaactgc ccgccgacgt gcttttccat ccacgccgcg
      361 cggtaacgct cgtcgacctc gcgttcggcc tcatcggcgc gacgctcacg ctcggaacac
      421 tgcagcgcca acgcggccat ttcgcgcgcg ttgtaggtga acttgtccag cggcttgccg
      481 gacagcgcgt gcttgatcgc gcgatgcacc agcagatcgg ggtagcggcg gatcggcgaa
      541 gtgaagtgcg cgtacgcctc cagcgccagg ccgaagtggc cgtggttgtc cgggctgtag
      601 atcgccaggc tctggctgcg cagcagcacc gactccagca gcgtggcatc ggggcgatcg
      661 cggatcttct tcagcagctt ggtgtagtcg ccggggcgca ccttcgacca cggcggcagg
      721 ctcagcttga actccttgag gaattccagc aggtcggcgt acttggtttc cggtggcttc
      781 tcgtggatgc ggtacggcgc cggcacgtgg cgcgacagca ggtacttggc cgcctcgacg
      841 ttggccgcga tcatgcattc ctcgatcagc ttgtgcgcgt cgttgcgcac cagcatgccg
      901 gcctgggtca cttcgccgcg gttgtccagc acgaaacgca cttcgctgct ttcgaactcg
      961 atggcaccgc gcttggcgcg cgccttcgac agcaccttgt acagctggtg caggcgctgc
     1021 acctgcggca gcagatcgcc catccaggcc ttggtatcgg catcatcctc gcccaccgcc
     1081 ttccacacct gggtgtaggt caggcgcgcg tgcgagttca tcaccgcttc gtagaagcgc
     1141 gaatgggtga ccaggccgtc gcggtcgatc tgcatgtcgc agacgaagca catgcggtcg
     1201 accttgggca tcagcgagca gatgccgttg gacagggtct ccggcagcat cggcaccacg
     1261 aagcccggga agtacaccga ggtcgcgcgc ttctgcgcct cctcgtccag cggcgtgccg
     1321 gggcgcacgt agttggagac atcggcgatc gccaccacca ggcggaagcc atcggcattc
     1381 ggctcgcagt acaccgcgtc gtcgaagtcc ttggcatcct cgccgtcgat ggtgaccagc
     1441 ggcgtgctgc gcagatcgac gcggtcgccg atcatcgacg gctcgaccac cagcggtacc
     1501 gatgcggctt cgtccagtac ttcctgcggg aactcgaacg gcagttcgtg gccgtggatg
     1561 gcggtctcca ccaccagcga ggcggtcagc ttgtcgccga gcacggcgat gatgcggccg
     1621 atcggcgggc ggcggctgtc cggtgcctgg gtcagttcgc agaccaccag ctggccgtcg
     1681 cgcgcgccac cggtctggtc cggcggcacc tgcacgttgc gctgcacgcg cttgtcgtcg
     1741 ggcaccacgt agttgatgcc catctcgacg ctgaagcggc caatcaggcg ggtcatgcca
     1801 cgttccagca cgcgggcgat gctgccctcg cggcggccgc gatggtcgat gccggtcacg
     1861 cgcgcgagca ccttgtcgcc gtgcatcacc ttgcgcattt catacggcgg caggaacagg
     1921 tcgtcgccgc cttcgaccgg gcgcaggaag ccgaaccctt ccgggttggc gatcaccacg
     1981 ccggtgacca ggttcagggt ctggatcggg gcgaagccac cgcgccggtt ctgtaccagc
     2041 tggccgtcgc ggaccatggc gccgagccgg cgcgacagcg cttcggcccg gtccggcgca
     2101 cccaggccca ggcgtgcgcc cagttcttcg gcggtctgcg gcccttcgca acgctccagc
     2161 agggccagga tggcctcgcg gctggcgatg ggttgttcgt acttttctgc ctcgcgggcg
     2221 gcatagggat cgtcgatcac cttgccggtc ggcggcagct tgcggcccgg agccgggccc
     2281 ggtgcatcat caccgtggcg cttgcggcca cgcggcggcg cgccgccttc gttcaattcg
     2341 gggaaccagc ccggcagcgg cttgcccggc ttggtggtgc gggccgcgcc cgccttggcg
     2401 cccttcttcg gggcctggct gcgggacttg ctcccgccct tgcttggttt tttggtagtc
     2461 atcgccctac atggtagccg gtgacggcgt gcagaacggg tcagtggccg ccttgaaggc
     2521 actgcgtgaa aaaattgcag gaagtcgttg acagcctgcg gattcatctt cacaattgcg
     2581 cctctggaac gcccaggtgg cggaattggt agacgcacta gtttcaggta ctagcgggta
     2641 aaaccgtgga ggttcgagtc ctctcctggg caccaacgaa aaaactcctc gctctggcgg
     2701 ggattttttt tgcctgctgc atggcgatgg atcctgattc ctgatcgaca ggcgtggtcg
     2761 ggaatccaga atggcttcac cagggtgttg acacccccgt aacaacaccc cataatctcg
     2821 ctcctcgacg cccaggtggc ggaattggta gacgcactag tttcaggtac tagcgggtaa
     2881 aaccgtggag gttcgagtcc tctcctgggc accatgtcga gaatgagaaa aacccgcgag
     2941 agcgggtttt ttcatgtccg gaatccgggc cttcgtagcg tcgagccatg ctcgactgca
     3001 ccggtccgta gagtcgagct tgctcgactg atgccatgca ggacgaagcg caaagcagtc
     3061 gagcatggct cgacgctaca aaagccgggc acgagcccct tcagaagaac ggccgcagca
     3121 ccagctccag cccgagcagc agcaggaacc cgaggaagca ggcgcggaac acccgcgcac
     3181 tgatccgctg ccggatcagc tgccccagcc acattcccag cagcgcgggt atcaccgcca
     3241 gcgcgctcag gcccagttgc tggataccga acgcgccgtg cagcaccagg ccggtggtca
     3301 gcgaaatcgt cgacaccgta aacgccagcc ccagcgcctg caccagttct tcgcgctgca
     3361 atcccagcga ctgcaggtac ggcaccgccg gcatcacgaa cacacccgtc gcaccggtca
     3421 ccacgcccga cagcgccccc accagcggcc ccagccaacg ctcgcactgc tgcggcacgc
     3481 ggaacaccgg ggccagcagc gcatacgccg cgtagaccac cagcgccacg ccaagtgcca
     3541 tgcgcgacca ggtgcgatcg accctcacca acagcgccgc cgcgcccagc gtcaccacca
     3601 ccaccgccag catcatcggc cacagccgcc gcacgatgtg gcccagtgac ggcccggaca
     3661 ccagctgcca tgcattggtg acgaaggtcg gaatgaacag catcgacgcc gctgctaccg
     3721 gggacagcgc gccaccgagc aggcccatgg ccaccgtcgg caggcccatc ccggtcacgc
     3781 ccttgaccac gccggccagc acgaacacca ccaccagcaa cacgtagaag tacatcgatt
     3841 cattcatgcc ttcattggat cgggccaccg cccggcgcac aatgcggtct tcccggcctc
     3901 gccttcggct gatccgaagg ctcgggcgtt gcaatgaggg cacgacatgc ggatggacat
     3961 cgccgacctg cggctgttcc tggccatcgc cgaagccggc agcatcacgg ccggcgcagc
     4021 gcaggcgaac ctggcgctcg gctcggccag tgaacgcctg cgcacgatcg aagccgacgc
     4081 cggtacggca ttgttgaacc ggcacccgcg cggagtcagc ctgaccgagg ccggcgctgc
     4141 cctcgcccac catgcccgcc tgatcctgcg gcagcaggcg cagctgcgcg gcgagctgca
     4201 ggcgttcgcg catggcgcgc gcggcaccct gcacctgtat gccaacaccg cggcgctgac
     4261 caactacctg cccgcgcggc tcgcaccgtg gctggccgaa cgcccgcgcc tgcatgtcga
     4321 actgctggaa cggaccagtc ctgaagtcgt gcgtgcgatc agtaccggcc aggccgaggc
     4381 cggcatcatc agcgacgcgg tcgatgccgc cggcctgcag cagcatgtgg tggccgaaga
     4441 tccgctggtg atgctgctgg ccgcagacca ccgcctcgca tcgcggcgca gcgtggcctt
     4501 cgccgatgtg gccggcgaga ccttcgttgc gctggccgat ggcaatgcac tgcagaccta
     4561 cattgaagac caggcgcgcg acatcgggcg ccgcctggac gtgcgcatcc gcatgaagac
     4621 cttcgaaggc gtgtgcatca tggtcggcca cggcatcggg gtcggcatcg tgccgcgtac
     4681 catcgcccgc cagcatcggc gcagcacgca cactgtcgcg gtaccgcttg ccgatgcgtg
     4741 ggctcaacgt cgcctgtgcg cctgttttgc cgagtggacg cagctgtcgc cggcgatgcg
     4801 cagcctgctg catcacctgg gcgtgcagcc gcagaaaaaa gcgtgaaatc ttgttgacac
     4861 atcttctgcc gttccccata attcgtctcc tgagtcgccc aggtggcgga attggtagac
     4921 gcactagctt caggtgctag cgggggcaac ttcgtggagg ttcgagtcct ctcctgggca
     4981 ccatgactca gcaaatgatc aaacccgcgc aagcgggttt tttcatgccc gtcatccggg
     5041 cacatccagg cgacgcgtgc atgcatcacg atgaggctgc aaacaaaaac cccgccttgc
     5101 ggcggggttt tgtttttcat caacaccggt cggtcaatgc ccgccgccgg ccgaagcagc
     5161 acctgcaccg gcgccgaacg gcggcttggc cagccacagg aacgcgatga tcgccaggaa
     5221 gatccaaccc agcaggaaga agatgtcgtt gaagcccatc tgcgatgcct ggtggttgat
     5281 catgttgttc agcaccgccg cgccatgttg cagatcaccc tgccccattg ccgccacctg
     5341 gtcctgcatg cccggctgat aggccgagat gtgctcggtc aggtcggcat ggtgcacctg
     5401 ggtgcgccgc gcccacagcc acgtcgtcag cgacgccgca aagctgccac ccagcgtacg
     5461 caggaacgtc gccaggcccg agcctgccgc gatctcgcga ccatccaggt ccgacaacag
     5521 gatctgcagc accggcatga agaacagcgc cacaccaata cccatgatca gctgcacgcc
     5581 ggccacgtgc atgtagtcca cctgcaggtt gaagttcgaa cgcaggaagc tggtcatcga
     5641 cagcacgatg aaggccaccg tggccagcat gcgcatgtcg aagcgcgatg cgtacttgcc
     5701 cacgaacggg gtcatgatca ccggcaggat gccgatcggc gcggtcgcca ggcccgccca
     5761 gatcgcggtg taacccatgt cacgctgcag ccactgcggg atcagcaggg ccacgctgaa
     5821 gaacgccgca taggccacca ccatcgccag cgtaccggcg cggaagttgc gatggcggaa
     5881 cagcttcagg tcgacgatcg gatccttgtc ggtcagctcc cagatcagga acaccgtcag
     5941 cgccaccacg gccacgcagg ccagcaccac gatcttcatc gacgagaacc agtcctcgtc
     6001 gttacccagg tcgagcacca gctgcagcgc gccaacaccg atcaccaggg tgatcagtcc
     6061 gacgtaatcc atcttcggct tctcgatctg ctccgggcgc cccttcagct ggttgcccac
     6121 caccagcgcg gcgaagatgc ccaacggcac gttgatcagg aagatccatt cccagctgta
     6181 gttgtcggtg atccagccac cgaggatggg gccgcagatc ggcgccacca cggtgatcat
     6241 cgccagcagc gccagcgcct gcccgcgttt ctcgcgggga tagatcgaga ccagcagtga
     6301 ctgcgtgatc ggatacatcg ggccggccac gaagccctgc agcgcgcgtg ataccaccag
     6361 catgcccatg ctctgcgcca ggccgcatag cagcgaggtg atgacgaagg ccagcgtggc
     6421 ccagacgaac agcttgcgct ctccgaagcg gcggctgagc cagccggtca gcggcagcgc
     6481 gatggccgtg ctgaccgcga acgaggtgat gacccaggtc gcctgctgcg aactggcacc
     6541 gagattaccg gcgatggtcg gcagcgagac gttggcgatg gtggtgtcga gcacctgcat
     6601 gaacgacgcc atcgccaggc ccacggtgca cagggcgacg ctgggcggca ggaacccgga
     6661 ggccgcaccc ggcgccgccg gggcgcccgg agcaccgggc gcggctggag cttgtgcgga
     6721 catggcgacc tcagcccacc ttcgcctgct gctgcggcag gttgccctgg atgatcgtgt
     6781 ggatcacctc atcggcatca tgcagctgct tggcatacac atcggtgtcg aacaccgtgc
     6841 ccttggccgc cgcgctcggc agcacttcgc ccttctggtc gcgcaggctc acttcggcct
     6901 tcatcgacag gccgatgcgc agcgggtgct cggccagctg cttggcatcg atggcgatgc
     6961 gcaccggcac gcgctgcacg atcttgatcc agttgccgct ggcgttctgc gccggcagca
     7021 gcgagaacgc cgagccggtg cccaggccca ggctctggat gcggcccttg tacttcacgt
     7081 caccggcgta caggtcggac ttcagctcca cttcctggcc caggcgcatg tggcgcagct
     7141 gggtttcctt gaagttggcc tcgacccaca tctgctcggt cggcaccacg gccatcaggg
     7201 cattgcccgg ctgcacgcgc tggccgacct gcaccgaacg ccgggcaacg tagccggtga
     7261 ccggcgcgac gatgccggcg cgggcattgt tgaggaaggc ctggcgcagc tgcgcggccg
     7321 ccgcctgcac gtccggctgg gtggcgatca cggtgtcgtc gaccagcgcg cggttgcgct
     7381 cgacggtctc gcgcgaaccg gccacggctg cttcggcggc cgccagctca tcgcgggcat
     7441 gggccagttc ttcgttggag atggcaccgg tggcggccag gtccttgcgg cgggcgaagt
     7501 cgtcacgcac gcgcttcagg gtcacctggc gggcattcag gtctgcctgc gcgccctcca
     7561 cgctgcggta caggccgcgg gtctggcgca ccgtcttggc caggttggct tcggcctgct
     7621 gcagcgccac cgaggtgtcg gacgggtcca gctgcaccag cagctggccg cgctcgacgc
     7681 gcatgccgtc atcggcgttg atggcgacca cggtaccggc caccagcggg gtgatctgca
     7741 cctggttgcc ctgcacgtag gcatcgtcgg tctcttcgaa ccaacggccg aacatgaagt
     7801 accacagcgc cagtgcggca agcagcagca cgacgatcac gaacaggccg cgcagcaggt
     7861 tgccgcggcg gttggaggcg gccggggccg cggtgtcttg ggtctggctc atggtggagg
     7921 tcttcaggaa tgcgaggaat cggaatggga ggcaatcggg gcgcggtcgg cgtcagcggg
     7981 ctggaaacca ccgcccaagg ccttgctcag gcgcaccgag gtctgcacct gctgcgactg
     8041 caggccggcc agctgctgct gcgattgcag cagggtggac tgcgcggtca gcacatccag
     8101 gtagctgccg atgccggcgc ggtagcgctg ctgggccagg tcgaaggccg aacgtgcggt
     8161 gtccacggcc tgctgctgcg cgtgcgcctg ctgtgccagc gaacgcaccg cattgacctg
     8221 gtcggcgacg tcgcgcaatg cgtcgagcac ggcctggttg tagttggcca ccgccaggtc
     8281 gtactgcgca tcggtgttgg ccaggttggc gcgcagcttg ccgccttcga agatcggcag
     8341 gctcagcgcc gggccgatgt aggcgaaggt ggaactgctc ttcagcagat cgcccacgtt
     8401 cggggcgacc acgccggcca gcgcggtcag gttgaagctc gggtagaact tggtcctggc
     8461 gactttgatc tgcttgtcgg ccgcttccac gcgccagcgc gcagccacga tatccgggcg
     8521 acggccaagc agttcgctcg gcagcacacc cggcagctgc aacgccatcg ggttcagcgg
     8581 ctgcgggcgc tggatcgaca ggccccggtc cgggcccttg ccgaccagcg cggccagcgc
     8641 ggtgcgggca gcgtcgatgc gctgctgcgc ggccagcacc tgctgctgcg cggccggcac
     8701 gcgggcctcg gcctggcgca cctgcaggtc actgtcgatg ccggcgctgc ggcgctggcg
     8761 ggtcagctga agcgacttct gcgagcgggt cagttcttcc tcggccacgt cattgagctg
     8821 ccaggcgtag gccaggtcgg cgtaagcctg ggcgatgccg gtggacaggt tcaggcgtgc
     8881 cgcctgggct tcgaccgtgg cggcatgcgc gccatccacg gccgcttccc aggcggcgcg
     8941 cttgccgccc cacaggtcca cgccgtagct gaagtcgaag gcaacctggc tgctgccgcc
     9001 gtagcggccg cccatctcgc tgccgaccat cgattcgggc aggcgcaggc cagtgtagcc
     9061 accggacacc gacaggctgg gcagctgatc ggcacgtgcg gtgccgacct gggcctgggc
     9121 ctggcgcagg cgtgcatcgg cggcgtccag gctcgggtgg ccggcgaggc cttcagcgac
     9181 cagcgcgtcc agctgcgcat cgcccagtgc cttccaccag tcctgcgccg ggaaaccggt
     9241 ggcgctcagg tcggtgtcgg ccagggtgcg ttcgctgtgc aggctgtcca cctcaagcac
     9301 gtggccctgc ggggtgaggc cgcggctgct ggcgcaggcg gccagggcca gggccagcgc
     9361 tgacaccagc agcgcgcgcc cggaccggcg gagagtggga tgcgggatcg ggttcatggg
     9421 gtcgtcagtg aatcgcggat tcgggtaagg agggacagca gcagcgtgcg ctcatcggcg
     9481 gaaagatcac gcagcgcgta atccatcacc gcatcgccgc gcagcttcag ccgcgcccac
     9541 agcgcgcggc cttcgtcggt cagcacgatc tgcagtgcac gccggtcctg cgcatgcggc
     9601 tcgcggcgga cgcagcccag cgcttccagc ttgtccagca ggcgggtgac cgcactgggc
     9661 acctggtcga tggcctgggc cagttcgttg gcggtacagg gggccatgtg cgaaagcacc
     9721 ttcagcccga tgtagtgggt gaagccgatg cccagatctt cttcagccat ggacgcgtcg
     9781 agttggcgga ccaggccgtc gcgcacctgg cgcagcagca ggccgaagct ggggggagtg
     9841 gttgcaggac agatcatggg ggagcattct cttccaaaaa aaatatttct caatggaaat
     9901 attcgatctg gcatcgaatg ctgtgttgca gcagcgggct cgatcagtga aggcgcctac
     9961 cttaatgatc tggtcaggtg gcccggtagt acaatccagc caatggatga cacatttcag
    10021 ccagcggata tgatgaacaa ggcagaaatc ccccctccca agcgcctgct gcgggacgac
    10081 gcgctggact ggttcgagcg caacgatggc ccaccggtcg tcgccttccg cttcgacagc
    10141 ccgcagggcc tggtccgcga agtggactgg caccaccacc agcgcgcgca gctgatctgc
    10201 gtcgagcgcg gcctgctgac cacccgcacc tcgcacggca cctggtcact ggcgccgggt
    10261 tcggccggct ggatgccgcc gcttgagcca catacggtca ccctcgacgg gccgttgcgc
    10321 ggctggggca tggccctggc ggcgcctgcc tgctccaccc tgccctccga tccgtgcgtg
    10381 ctgggcctgt ccaagctggc gcaggcgctg gccgaccgca tctgcgaatg gccgctgggc
    10441 tatgccacca cgcccgaacg ccagcacatc atcgacgtgc tgctggacga gatccgcacc
    10501 gcgccacgcc agcgcatgca cctgccgatg ccgcatgacc ggcgcctgct gaagatcgcc
    10561 tcgcagctgc tggccgaccc gtccgacgag cgcagcctgg ccgaatgggc gcactgggcc
    10621 gggctttccc cgcgcagcct gacccgccac ttccgcgacg agaccaccct cagcttcgcc
    10681 cagtggcggc agcaggcccg cctgtccgag gccctgcgcc aactgaccga cggccgcagc
    10741 gtggccgata tcgcccatgc gctgggcttc agcagcgcca gcgccttcgt caccgtgttc
    10801 cgccgccact tcgggctgcc acccgggcgc tacctggcac gcgccgggca tggcctggaa
    10861 accgggctgg accctgcgcg cggcttggca tcccccgccg catccggata atcacaggat
    10921 tgcgagcggc gaccgccgtc gccgcctccc gacaacaggt aacaacgccg catgaccgaa
    10981 cttgcccgcc ccgtgttcca cggattcgaa caactgccgc tgcgcgagta cgccgagcgc
    11041 gcctacctcg actactcgat gtacgtggtc ctggaccgcg ccctgccgtt catcggcgac
    11101 ggcctgaagc cggtgcagcg ccgcatcatc tattcgatga gcgagctggg cctgaatgcc
    11161 gcgtccaagc cgaagaagtc cgcgcgcacc gtcggtgacg tcatcggtaa gtaccacccg
    11221 cacggcgaca gcgcgtgcta cgaagcgctg gtgctgatgg cccagccgtt ctcgtaccgc
    11281 tatccgctga tcgagggcca gggcaacttc ggctccagcg acgacccgaa gtcgttcgcg
    11341 gcgatgcgtt acaccgaatc caagctgacc ccgatcgccg aagtgctgct gggcgaactg
    11401 ggccagggca ccaccgactg ggcgccgaac ttcgacggca ccctgcagga accgacctgg
    11461 atgccggcgc ggctgccgca cctgctgctc aacggcacca ccggcatcgc cgtgggcatg
    11521 gccaccgacg tgccgccgca caatctcaac gagatcgtca gcgcgctgct gcacctgctg
    11581 gacaaccccg aggccagcgt gcgcgacctg tgcgaacacg tgcagggccc ggactacccg
    11641 tccagcgccg agatcatcac cgcggccagc gatctgcgga acatgtacga gaccggcaac
    11701 ggcagcgtgc gtgcgcgtgc gaccttcacc aaggaagcca acaacatcgt ggtcacggcg
    11761 ctgccgttcc aggtgtcgcc gtcgaaggtg atcgagcaga tcgccgcgca gatgcgcgcc
    11821 aagaagctgc cgtggctgga agacatccgc gatgagtccg accacgccaa cccggtgcgg
    11881 gtggtgctgg tgccgcgctc caaccgcgtc gacgccgaac agctgatggg ccacctgttc
    11941 gcgaccacgg acatggagcg cagctaccgc gtcaacctca acgtgatcgg gctggacggc
    12001 cgtcctcagg tgaagaacct gaagatgctg ctcagcgaat ggctgacctt ccgcagcaat
    12061 accgtcaccc gccgcctgca gcaccgcctg cagaaggtcg agcgccgcct gcacctgttg
    12121 gaaggtctgc tggtcgcgtt cctcaacctg gacgaggtga tccacatcat ccgtaccgag
    12181 gacgaaccga aggcagcgct gatcgcgcgc ttcggcctgt ccgacgacca ggccgagtac
    12241 atcctggaaa ccaagctgaa gcagctggcg cgcctggaag agatgaagat ccgcggcgag
    12301 caggacgagc tggccaagga gcgcgagaag atccttggca tcctcgacag caaggccaag
    12361 ctgaagaagc tgatccgcga cgaactgacc gccgatgcca agaagttcgg cgacgcacgc
    12421 cgttcgccgc tggtgcagcg ccatgccgcg caggccatcg acgagaccga gctggtgccg
    12481 agcgagccga tgaccgtcgt gctgtcggag aagggctgga tccgtgcggc caagggccac
    12541 gatgtcgatg cgtccgccct gtcctaccgc gatggcgacg ccctgcaggg cgcggtacgc
    12601 gcgcgcagta cccagcaggt tgcgttcctc gacagcgagg gccgcgccta ctcgacgccg
    12661 gtgcataccc tgccgtccgc tcgcggcaac ggtgaaccgc tgaccggccg cttctcgccg
    12721 gcgccgggca ccagattcgt caccctggca agcgccgaac cggacacccg cttcgtgctg
    12781 gcctccagcc atggctacgg cttcgtcacc cgcttcgaga acctgatcgg ccgcaacaag
    12841 gccggcaagg cgatgctgaa cctgtcggcc ggctcgtcgg tgctgatccc ttcggtggtt
    12901 gccaacgtcg ccactgatcg catcgtggcg gtgaccagct ccggcaacct gctggcgatc
    12961 gccgccaacg acctgccgga actggacaag ggcaagggca acaagatcat cgagatcccc
    13021 aaggccaagc tcgccaccga acgcgtggtc gccatcgtgg cgatcagccc gggccagacc
    13081 ctgcaggtgc gcagcggcca gcgcaccatg ggcctgaagt tcaacgagct ggacgcctat
    13141 ctcggcgccc gcgccacccg cggccacctg ttgccgcgtg gctggcagaa ggtggaaggc
    13201 ctgtcggtgg a
//
LOCUS       DAOKIP010000108        12801 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.108,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000108 DAOKIP010000000
VERSION     DAOKIP010000108.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 12801)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12801)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12801
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.108"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(11..1462)
                     /locus_tag="QEL58_002513"
     CDS             complement(11..1462)
                     /locus_tag="QEL58_002513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006388325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine:cation symporter family protein"
                     /protein_id="HDS1676969.1"
                     /translation="MNIESIVNAILGVVWSPYLVVLCLLTGLYFSVRTRFIQLRALPD
                     MLRLVFRHERSESGVSPFQALSISLSSRVGVGNIAGVAMAIAFGGPGAIFWMWVVAFL
                     GASSAFIESTLAQIYKDRDAKGQYRGGPAYYIEKGLGQRWYAVLFALVTVLAGAMLAG
                     TQSNAITSAVNEAWDVPVMTTTVVLLVVLGIILIGGVRRIARVAEWVVPLMAVAYLMV
                     AAVVMVLNAEKVPGVIMLVLNSAFGEDAAFGAMIGTAIQWGVRRGVLSNEAGMGSGAH
                     AAAAAEVSHPVKQGLVQSFSVYIDTMVVCSATAFLILSTGLYNIYDPAVNGVPDEARL
                     LLANLPGVEAGPRFVQHAVESALPGFGRSFVALAILPFAFTTILALYYMAETNVSYLC
                     RDRPSRWAMGAFQLLFLAVAGYSAVNSATVAWSLGDIGVGLMSWLNIIAILLLQKPAL
                     AALRDYEQHRHAGTEPLFNPQRLGVRNTRVWEG"
     gene            complement(1473..2465)
                     /locus_tag="QEL58_002514"
     CDS             complement(1473..2465)
                     /locus_tag="QEL58_002514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014038285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676970.1"
                     /translation="MHRVKHPTMRASLLLALCALAAPAVHADERSLDGINFTGPLITP
                     NPAGLPQGNWYIEPYLVRVDSRDHYDDNGDRRRSAERSGAWATVVPIIYGFSDRVMGQ
                     VNLSASRSESGSARSSGFRAGDTTARLQYLLQAPNADGTRPAISVALVQRFSTGSHDR
                     ITGNPLDAQGDGVQRTTAALGVQQVVWLGNDRPLRWRAQFSAGPAPSRTAISGTSVYG
                     TDDSFQGHIARGSVLGLSVGAEYSFNSRWVGVMELAASRESGQRLSGFARNGAGVIER
                     IDERRPASRNVSLAPAVEYHFSPSLGLIAGVEFTVAGRNTGRIVSPQVALGMFF"
     gene            complement(2705..3541)
                     /locus_tag="QEL58_002515"
     CDS             complement(2705..3541)
                     /locus_tag="QEL58_002515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006388350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA methyltransferase"
                     /protein_id="HDS1676971.1"
                     /translation="MNNPWNNRRPSARPPRATPLPRPEVPATGGGGRGGSDELRLYGL
                     NAVLAAFDARPQALRKLYLLEARIPRLQPLLKWCVANRVGYRVVEDGDLNKLAGTTHH
                     EGVVADVLRAPALPLAQWLQQVGDGPALALWLDGVGNPHNLGAILRSAAHFGAKALLL
                     PEGSTLALSGAAARVAEGGAEAVPLVQLPAAAQAMAQLRDAGFGLAATLVEGGDDVFR
                     AALPARLVYVMGAEGEGMDRALASQCDQQVSIPGSGAVESLNVASATAVLLAQWASRR
                     DG"
     gene            complement(3542..5053)
                     /locus_tag="QEL58_002516"
     CDS             complement(3542..5053)
                     /locus_tag="QEL58_002516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005418815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine:cation symporter family protein"
                     /protein_id="HDS1676972.1"
                     /translation="MEATVHFINSIIWSKALIFMCLAAGLFFSLRTRFMQIRGFVEMC
                     RLTVSGEKSDAGVSSFQALAMSMAGRMGIGNIAGVATAIAFGGPGAIFWMWVMGFLGA
                     STSYVECTLAQIYKTKDAEGRYRGGPAYYIEKAMGLKWYALAFAIATIIAAGFLMPGV
                     QANAIADSIINACRGTALCGPLDGQAFGMESVQALKLGIGIVVALLLGVVIFGGVKRI
                     ANFAEVVVPFMAAGFILMAIVIMIINYDRVPEMFGIIFKSAFGTHAAFGAMMGLAVEW
                     GIKRGIYANEAGQGSGPHAAAASEVSHPAKQGYVQAFAIYFDTMMVCTATAFLILASG
                     TYNVYSPAGASAPPIFQGLAGIPEGAGYAQAGVEAVLPGWGSAFVSIAIFFFAFTTIM
                     AYYYMAETNLSYVNHNKKRPLTVLVLRLGIIGMVVFGAFHNATLAWALGDIGVGLMAW
                     LNIIAILIIQKPAMLALRDYERQKKLGLDPVFDPDALGIKNADFWRQRKQESV"
     gene            complement(5164..5703)
                     /locus_tag="QEL58_002517"
     CDS             complement(5164..5703)
                     /locus_tag="QEL58_002517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDS1676973.1"
                     /translation="MPDPAQRLYGDGFVLRPWCSDDLESLLHHANDAEVSRGLRDRFP
                     FPYTREDGEAFLAGRVLAPGTLNLAIEIDGHACGSIGAQQGSAERAHMAELGYWLGQA
                     YWGQGLMTRVVGLFAPWVMDELRLFRLQAGVVDFNLGSVRVLEKNGFQEEGIDRCAVY
                     KRGVLHDLRRFARVRMQLP"
     gene            complement(5696..8821)
                     /locus_tag="QEL58_002518"
     CDS             complement(5696..8821)
                     /locus_tag="QEL58_002518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010370936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HDS1676974.1"
                     /translation="MKLSDISIQRPVFAVVMSLLLLVLGVMSFTRLTLRELPAIDPPI
                     VSVSVDYTGASAAVIESRITQVLEDALAGIEGIDTINARSTNGRSQVSIEFTSNRDIE
                     AAANDVRDAVSRVADRMPEEARPPEIAKVESDADPIIWFNMVSSTMDTLELSDYADRY
                     VVDRFSSLDGVAQVRIGGRQRYAMRIWLDRDQLAARGLTTGDVETALRNENVELPAGR
                     IESTDRDFTLRVERNYIKPEDFATIPLGKGRDGYVVRMGDVAKIELASAERRAYYRSN
                     GEPGIGLGIVKTSTANSLDVARVARAEAERVALTLPKGTQIFVAFDNTTFIEAAVDRV
                     YATLVEAMILVLAVIWLFLGSFRAALIPAVTVPVCLVAAFIALYAFDFSINLLTLLAL
                     VLCIGLVVDDAIVVVENVQRRIDLGEPPLVASKRGTAQVAFAVIATTAVLVAVFLPVG
                     FLEGNTGRLFRELAVALAAAVALSAFVALTLTPMMASKLLKPHTGQAPRGLHGFVNRN
                     LERLAGAYGRVLDHHVDRTWIYLLVMVAALAASWGLLKLLPSELAPAEDRGSFQIMID
                     GPEGAGYDYTVQQVQQVEAMLAPHVGADKPIVRANPRVPGGWGASEEMHTGRVSIFLQ
                     PWRQRSEGTPEVANELQKELDTIRGVRVRTQVGGGLVRSGGQPFQIVLGGPEYAEIAQ
                     WRDRILLRMADNPGLVGPDSDYKETRPQMRVNIDRQRAADLGVPVTAIGSALETMMGS
                     RRVTTFVDNGEEYDVLVQAGRDGRTSPADLAAIRVRATSGELVPLSNLVTLSEVAEAG
                     TLNRFNRLRSITITAGLAPGYPLGEAIAWAQNVAREELPQYAQVNWKGESREYQSAGG
                     AVLLTFAMALLVVYLVLAAQFESFIHPLTIMLTVPLGVLGALVGLWVSGGTVNLFSQI
                     GIVMLVGLAAKNGILIVEFANQLRDDGRTVREAIIESAMVRLRPILMTSIATVVGAVP
                     LVVAGGPGSASRGTIGIVIIFGVTLSTFLSLFVVPAFYARLAPYTRSPEAVKRELEKQ
                     EAASPSVGGHA"
     gene            complement(8818..9924)
                     /locus_tag="QEL58_002519"
     CDS             complement(8818..9924)
                     /locus_tag="QEL58_002519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HDS1676975.1"
                     /translation="MLARIASTLALGLSLAVLAGCAGKQEAAARRQGEAVPVTAQVVQ
                     PTQWNDTLQALGTAKARESISVTAKVSEIVEKVHFESGQHIAAGAPIVTLRGQAQEAA
                     LVQAQATFHEADQLYKRQRELATQRLVSSATLDTQKSIRDAAEARVAQMQSDIGDRRV
                     RAPFAGVLGIRQVSPGTLLTPTTVIATLDDIEHMHIDFQVPEVELAALGVGDKVSATS
                     VAWPGRTFEGVVSTIDARIDPATRAVTVRADFANGDHALRPGMLLDVRLFHPEREALV
                     VPEIAVVQVGRDTFVYRIKADDSVERVDVVTGARRAGVVEIKQGLEAGQRIVVDGTGK
                     LRPGLKVAAKDAAPASGAKPADAPAPVAAEGHGG"
     gene            complement(10140..12203)
                     /locus_tag="QEL58_002520"
     CDS             complement(10140..12203)
                     /locus_tag="QEL58_002520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006388401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent copper receptor"
                     /protein_id="HDS1676976.1"
                     /translation="MKMTSRPAGAYARLPVALGLAVAASLAHAAPADEARTLDTMVVT
                     AAAPSSPLHWVTDPRLPRQPVPASDGADYLKTVPGFSAIRNGGTNGDPVLRGMFGSRL
                     NILSNDGNLIGACPSRMDNPLSYIAPESFDRLTIIKGPQSVRWGAGASAGTVRFERDT
                     PRFEEPGLRADASALVGSRNRNDQVLDLTLGNPTGYVRASGNRSEADDYKDGNGDVVP
                     SKWRKWNGDVAIGWTPDADTLLEISAGAGDAIVRYAGRGMDGAAFERTSYAARFEKRN
                     LPGAWDTVQANVYYNEADHVMDNYTLRTPNPHSMMPMPMASNVDRRTQGGRVSSEWRW
                     QDVQLVAGVDGEDSRHRGRMGMGRDTYRQAAWETDANFRRYGAFTELTLGAGTDQRWI
                     SGLRIDRASVRDERQSIRGMMGNMPNPTAGQRRKEWLGSGFLRYEQDLADGLTWYAGL
                     GRSERMPDYWELFSPDHGPAGAPNAFAGIQPERTTQLDVGLQYKGRRVQAWVSAYAGQ
                     IQDYILFTYHGSGMMGMSQASNVDARIAGAEAGLEVSVAEQWKLGGTLAYAWGENRDQ
                     QRPLPQMPPLEARLSANWEGQRWSAGALLRAVTHQHRVADGQGNVVAQDLGPSAGFAT
                     FALNAAYRFSSQLQLSAGVDNLFDRAYSEHLNLAGSADFGFPADPVRINEPGRSVWMK
                     VNYRY"
     gene            complement(12276..12677)
                     /locus_tag="QEL58_002521"
     CDS             complement(12276..12677)
                     /locus_tag="QEL58_002521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012511955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2946 domain-containing protein"
                     /protein_id="HDS1676977.1"
                     /translation="MTRLSRPQRLLLQLAVLATLLMVLAPLVSRALQAQPMDHAARVG
                     MDHAAMGHDQHGTAPASPSRPADPHAMHGEACEYCVLAMRLLPWLAVLVLLLPLLWRP
                     RLVFPWSQRVLPIARWPAHAARGPPRASIVR"
BASE COUNT         2152 a         4393 c         4272 g         1984 t
ORIGIN      
        1 cccgatcctg tcagccctcc cacacacggg tgttgcgcac gcccagccgc tgtggattga
       61 acaatggttc cgtaccggca tggcgatgct gttcgtagtc gcgcaatgcc gccaacgccg
      121 gcttctgcag cagcaggatg gcgatgatgt tgagccagct catcaggccg accccaatgt
      181 cgcccagcga ccatgccacc gttgcgctgt tcaccgccga gtagccggca accgccagga
      241 acagcagctg gaatgccccc atcgcccacc gcgaaggacg atcccggcac aggtaactga
      301 cgttggtttc ggccatgtag tacagcgcca ggatggtggt gaatgcgaat ggcaggatcg
      361 ccagcgccac gaacgaacgg ccgaagcccg gcagcgccga ttccacggcg tgctgcacga
      421 aacgcggccc ggcctcgaca cccggaagat tggccagcag caggcgggcc tcatcgggaa
      481 cgccgttcac agctgggtcg tagatgttgt acaggccggt ggacaggatc aggaatgcgg
      541 ttgcgctgca caccaccatc gtgtcgatgt agaccgagaa tgactgcacc agtccctgct
      601 tgaccggatg cgagacttcg gcggcagcgg ccgcatgcgc gccactgccc atgccggcct
      661 cgttggacag cacgccgcgg cgaacgcccc actggatggc ggtgccgatc attgcgccga
      721 aggccgcgtc ctcgccgaat gcgctgttca gcaccagcat gatcacgccg ggcacttttt
      781 ccgcgttgag caccattacc actgcggcca ccatcaggta ggccaccgcc atcagcggca
      841 ccacccattc cgccactcgc gcgatgcgcc gcacaccacc gatcaggatg atgcccagca
      901 ccaccagcag caccacggtg gtggtcatca ccggcacatc ccaggcttcg ttcaccgcac
      961 tggtgatcgc attggactgg gtccctgcca gcatggcgcc ggcgagcacg gtcaccagcg
     1021 cgaacagcac tgcataccag cgctggccca ggcccttttc gatgtagtac gccggcccgc
     1081 cgcggtactg gcccttggca tcacggtcct tgtagatctg cgccagggtg gattcgatga
     1141 aggcactgga ggcaccgaga aaggcaacga cccacatcca gaagatcgca ccggggccac
     1201 cgaaggcgat ggccatggcc acgccggcga tgttgcctac accgacccgg ctggacagcg
     1261 agatcgacag tgcctggaac ggtgacaccc cggactcgga gcgttcgtgg cggaacacca
     1321 ggcgcagcat gtccggcagc gcgcgcagct ggatgaagcg ggtacgcacg ctgaagtaca
     1381 gcccggtgag caggcacagc accaccaggt aggggctcca gaccacgccc aggattgcat
     1441 tgacgatgga ttcaatgttc atcggcggcc cctcagaaga acatgcccag ggcgacctgg
     1501 gggctgacga tacgcccggt gttgcgcccg gccacggtga attcgacgcc agcaatcaac
     1561 cccagcgagg ggctgaagtg atactccacg gcaggcgcca ggctgacgtt gcggctggcc
     1621 gggcggcgtt cgtcgatgcg ctcgattacc cccgcaccgt tgcgggcgaa gccactcagc
     1681 cgctggccgc tctcgcggct ggcggccagt tccatcaccc ccacccagcg cgaattgaag
     1741 ctgtactcgg cgcccaccga cagccccagc accgagccac gcgcgatgtg accctggaag
     1801 ctgtcgtcgg taccgtagac gctggtgccg gaaatggcgg tacgcgaggg agcggggccg
     1861 gcgctgaact gggcccgcca ccgcagcggg cggtcgttgc ccagccacac cacctgctgc
     1921 acgcccagcg cagcggtggt gcgctgcacg ccgtcgccct gcgcatcgag cggattgccg
     1981 gtgatgcggt catggctgcc ggtgctgaag cgctgtacca gcgcgaccga gatggccggg
     2041 cgggtgccat cggcgttcgg cgcctgcagg aggtactgca accgtgcggt ggtgtcgcca
     2101 gcgcggaaac cactgctgcg tgcgctgccg gattccgaac gtgaggcact gaggttgacc
     2161 tggcccatca cccggtcgct gaagccatag atgatcggca ccacggttgc ccatgcgccg
     2221 ctgcgctcgg cactgcggcg acgatcaccg ttgtcgtcat agtggtcgcg gctgtcgacc
     2281 cgcaccagat agggctcgat gtaccagttg ccctgcggca ggccggccgg attcggggtg
     2341 atcagcggtc cggtgaagtt gatgccgtcc aggcttcgct catcggcgtg caccgccggt
     2401 gcggcgagcg cacacagggc cagcagcagg gatgcgcgca tcgtggggtg tttgactcga
     2461 tgcatgggaa ccactcctgt tcgacgttgg atggagatcc accgtgcgat gcgggatatg
     2521 gctcgacaat gagacaatta ctaaaaacac ctgatcctcg atcaagcgcg cttgatgcga
     2581 cacgcggtga agtgattggc ccgccagccg cgcagcgcgg cacgcctgtt tccgcaccgc
     2641 gcaaaagaaa acccggccac aggggccggg tccaggtcat cgatgggacg gtatcgcggc
     2701 agtatcagcc gtcgcgacgg ctcgcccact gcgccagcag cactgccgtg gccgaggcca
     2761 cgttcaggct ttccaccgcg ccgctgccgg gaatggaaac ctgctgatcg cactggctgg
     2821 ccagcgcacg gtccatgcct tcgccctcgg cacccatcac atacaccagc cgcgccggaa
     2881 gcgccgcacg gaatacatcg tcaccgccct cgaccagggt cgcggccagg ccgaaaccgg
     2941 cgtcccgcag ctgcgccatc gcctgtgcgg cggccggcag ctgcaccagc ggcaccgctt
     3001 cggcaccgcc ctccgccacg cgtgcggcgg caccggacag cgccagcgtg ctgccttcgg
     3061 gcagcagcag cgccttggcg ccgaagtgcg ctgccgagcg caggatcgcg ccgaggttgt
     3121 gcgggttgcc cacgccgtcc agccacagcg ccagcgccgg gccgtcaccg acctgctgca
     3181 gccactgcgc caacggcagt gccggtgcgc gcagcacatc ggccaccacg ccttcgtgat
     3241 gggtggtacc ggcgagcttg ttcagatcgc cgtcctcaac cacgcgatag cccacgcggt
     3301 tggccacgca ccacttcagc agtggctgca ggcgcggaat gcgcgcctcc agcaggtaca
     3361 gcttgcgcag cgcctgcggc cgcgcgtcga acgcggccag cacggcattc aggccgtaca
     3421 ggcgcagctc gtcgctgccg ccgcgcccac caccgcccgt ggccggcacc tccgggcgcg
     3481 gcaacggtgt tgcgcgcggc ggacgggcgg acgggcggcg gttgttccaa gggttgttca
     3541 cttacacact ctcctgcttg cgctggcgcc agaaatcggc gttcttgatg cccagggcat
     3601 cagggtcgaa caccggatcc aggcccagct tcttctgtcg ttcgtagtca cgcagggcca
     3661 gcatcgccgg cttctggatg atgaggatgg cgatgatgtt cagccaggcc atcaggccga
     3721 cgccgatgtc acccagcgcc caggccaggg tcgcattgtg gaacgcaccg aacaccacca
     3781 tgccgatgat gcccaggcgc agcaccagca cggtcagcgg gcgcttcttg ttgtggttca
     3841 catagctgag gttggtctcg gccatgtagt agtacgccat gatggtggtg aaggcgaaga
     3901 agaagatggc gatcgagacg aacgccgagc cccagcccgg cagcaccgct tccacgccgg
     3961 cctgcgcata gcccgcgcct tccggaatgc cggccaggcc ctggaagatc ggcggggcgc
     4021 tggcgcctgc cggcgagtac acgttgtagg tgccgctggc caggatcagg aacgcggtgg
     4081 cggtgcacac catcatggtg tcgaagtaga tggcgaaggc ctgcacgtaa ccctgcttgg
     4141 ccgggtgcga gacttccgaa gcggctgccg cgtgcggacc cgagccctgc ccggcttcat
     4201 tggcatagat gccgcgcttg atgccccact ccaccgccag gcccatcatc gcgccgaacg
     4261 cggcgtgggt gccgaaggcg ctcttgaaga tgatgccgaa catctccggc acgcgatcgt
     4321 agttgatgat catgatgacg atggccatca ggatgaagcc ggcggccatg aacggcacca
     4381 ccacttcggc gaaattggcg atgcgcttga cgccaccgaa gatcaccacg cccagcagca
     4441 gtgccaccac gatgccgatg cccagcttca gggcctgcac cgattccatg ccgaaggcct
     4501 ggccgtccag cgggccgcac agcgcggtgc cacggcaggc gttgatgatg ctgtcggcga
     4561 tggcgttggc ctgcacgccc ggcatcagga agccggccgc gatgatcgtg gcgatggcga
     4621 aggccagcgc gtaccacttc aggcccatgg ccttttcgat gtagtaggcc gggccaccgc
     4681 ggtagcggcc ttcggcatcc ttggtcttgt agatctgcgc cagggtgcat tccacgtacg
     4741 aggtggacgc gccgaggaag cccatcaccc acatccagaa gatggcaccc gggccgccga
     4801 aggcgatggc ggtggccacg ccggcgatgt tgccgatgcc catgcggccg gccatcgaca
     4861 tggccagcgc ctggaacgag gacacgccgg cgtcggactt ctcacccgac acggtgaggc
     4921 ggcacatctc gacgaaacca cggatctgca tgaagcgggt gcgcaagctg aagaacaggc
     4981 cggcggccag gcacatgaag atcagtgcct tgctccagat gatgctgttg atgaaatgta
     5041 cggtagcttc cacgcgcgct ctctccagtc ggcgggttgt aaggacgtcc cgtcggctgg
     5101 aggggaccgg tcgattctcc ctgatcgaag gccgctgcgg tagcgccaga aggaattcgc
     5161 cgctcagggc agctgcatgc gtacccgggc aaaccggcgc aggtcgtgca ggacgccacg
     5221 cttgtagacc gcacagcggt caatgccttc ttcctggaaa ccgttctttt ccagcacccg
     5281 gaccgaaccg aggttgaaat cgaccacccc ggcctgcagc ctgaacaggc gcagctcgtc
     5341 catcacccac ggtgcgaaca ggccgaccac gcgggtcatc agcccttggc cccagtaggc
     5401 ctgccccagc cagtagccca gctcggccat atgcgcgcgc tcggcgctgc cctgctgggc
     5461 accgatgctg ccgcaggcat ggccgtcgat ctcgatggcc aggttgagcg ttcccggcgc
     5521 cagtacccgg ccggcgagga acgcctcgcc atcctcgcgg gtgtacggga acgggaagcg
     5581 atcacgcagg ccacgcgaga cctcggcgtc attggcgtgg tgcagcagcg actccaggtc
     5641 gtcgctgcac cacggcctca acacgaagcc gtcgccgtac aggcgctgcg ccgggtcagg
     5701 catggccgcc caccgacggc gacgcggctt cctgcttttc cagctcgcgc ttcaccgctt
     5761 ccggcgaacg cgtatagggc gccaatcgcg cgtagaacgc cggcaccacg aacagcgaca
     5821 ggaacgtcga gagggtcacg ccgaagatga tcacgatgcc gatcgtgcca cggctggccg
     5881 aacccgggcc accggccacc accagcggga ccgcgccgac cacggtggcg atcgaggtca
     5941 tcaggatcgg gcgcaggcgc accatcgccg attcgatgat cgcctcgcgt accgtgcgcc
     6001 catcgtcacg cagctggttg gcgaactcga cgatgaggat gccgttcttc gcggccaggc
     6061 cgaccagcat gacgatgccg atctggctga acaggttcac cgtaccccca ctcacccaca
     6121 acccgaccag tgcgccgagc acgcccagcg gcacggtcag catgatggtc agcggatgga
     6181 tgaaactctc gaactgcgcg gccagcacca ggtacaccac cagcagcgcc atggcgaagg
     6241 tcagcagcac cgcgccaccg gcgctctggt actcgcgcga ctcgcccttc cagttcacct
     6301 gcgcgtactg cggcagttcc tcgcgggcca cgttctgcgc ccaggcgatg gcctcgccca
     6361 gcggataacc gggcgccagg ccggcggtga tggtgatcga gcgcaggcgg ttgaagcggt
     6421 tcagggtgcc ggcctcggcc acttcactca gcgtgaccag gttggacagc ggcaccagtt
     6481 cgccggaggt ggcgcgcacg cggatcgcgg ccaggtcggc cgggctggtg cgtccatcgc
     6541 ggccggcctg caccagcacg tcgtactcct cgccgttgtc gacgaaagtg gtgacgcggc
     6601 gcgagcccat catggtttcc agcgccgaac cgatcgcggt gaccggcacg ccgaggtcgg
     6661 ccgcacgctg gcggtcgatg ttcacccgca tctgcggccg ggtttccttg tagtccgagt
     6721 ccggaccgac caggccggga ttgtcggcca tgcgcagcag gatgcgatcg cgccactggg
     6781 cgatttcggc gtattccggc ccgcccagca cgatctggaa cggctgcccg ccactgcgca
     6841 ccaggccccc gcccacctgc gtgcgcacgc gcacgccgcg gatggtgtcc agttccttct
     6901 gcagctcgtt ggccacctct ggcgtgcctt cactgcgctg ccgccacggc tgcaggaaga
     6961 tgctgacacg gccggtgtgc atttcctcgc tggcgcccca gccaccgggc acgcgcgggt
     7021 tggcgcgcac gatcggcttg tccgcgccca cgtgcggggc cagcatcgct tccacctgct
     7081 gcacctgctg cacggtgtag tcgtagccgg cgccttccgg gccatcgatc atgatctgga
     7141 acgaaccacg gtcttcggcc ggggccagct ccgaaggcag cagcttgagc aggccccagc
     7201 tggcggccag cgcggccacc atcaccagca ggtagatcca ggtgcggtcg acgtggtggt
     7261 ccagcacgcg gccataggcg ccggccaggc gctccaggtt gcggttgacg aagccatgca
     7321 ggccgcgcgg cgcctgcccg gtgtgcggct tgagcagctt ggaggccatc atcggcgtca
     7381 gcgtcagcgc gacgaaggcg gacaacgcca ccgccgccgc cagcgccacc gccagttcac
     7441 ggaacaggcg cccggtgttg ccttccagga agcccaccgg caggaacacc gccaccagca
     7501 cggcggtcgt ggcgatcacc gcgaaggcga cctgcgcggt accgcgcttg gaggcgacca
     7561 gcggtggctc gcccaggtcg atgcggcgct gcacgttctc caccaccacg atcgcatcgt
     7621 ccaccaccag gccgatgcac aacaccaggg caagcagggt cagcaggttg atcgagaaat
     7681 cgaacgcgta cagcgcgatg aaagcggcca ccaggcagac cggcaccgtc actgcaggaa
     7741 tcagtgcggc gcggaaactg cccaggaaca gccagatcac cgccagcacc aggatcatcg
     7801 cctcgaccag cgtggcgtag acgcggtcca ctgcggcttc gatgaaggtg gtgttgtcga
     7861 aggcgacgaa gatctgcgtg cccttgggca gcgtcaacgc aacccgctcg gcttccgcgc
     7921 gcgccacgcg ggccacgtcc agcgagttgg cggtggaggt cttgacgata cccaggccga
     7981 tgcccggctc gccgttgctg cggtagtacg cgcggcgctc ggccgaggcc agctcgatct
     8041 tcgccacgtc gcccatgcgc accacataac cgtcgcggcc cttgcccagc gggatggtcg
     8101 cgaagtcttc cggcttgatg tagttgcgct ccacgcgcag ggtgaaatca cggtcggtcg
     8161 attcgatgcg gccggccggc agttccacgt tctcgttgcg cagcgcggtt tccacgtcac
     8221 cggtggtcag gccgcgcgcg gccagctggt cacggtccag ccagatgcgc atcgcgtagc
     8281 gctggcggcc accgatgcgg acctgggcca cgccgtccag gctggagaag cgatcgacca
     8341 cgtagcgatc ggcgtagtcg ctcagttcca gcgtgtccat ggtcgaggag accatgttga
     8401 accagatgat cgggtcggca tcgctctcga ccttggcgat ttccggcggg cgcgcttcct
     8461 ccggcatgcg gtcggcgacg cggctgaccg catcgcgcac gtcgttggcc gccgcttcga
     8521 tatcgcggtt ggaggtgaat tcgatgctga cctgcgagcg gccattggtg ctgcgcgcgt
     8581 tgatcgtgtc gatgccttcg atgccggcca gcgcatcttc cagcacctgg gtgatgcggc
     8641 tttcgatgac cgccgccgaa gcgccggtgt agtccaccga gaccgagacg atcggcggat
     8701 cgatcgccgg cagttcgcgc agggtcaggc gagtgaagga catcacgccc agcaccagca
     8761 gcaacaggct catcaccacg gcgaacaccg gccgctggat ggagatgtcg gacagcttca
     8821 tccgccgtgg ccctcggcgg cgaccggcgc cggcgcgtca gccggcttgg caccactggc
     8881 cggtgcggcg tccttggcgg cgaccttcag gcccgggcgc agcttgccgg tgccatccac
     8941 cacgatgcgc tgcccggcct ccaggccctg cttgatctcg accacgccgg cacggcgcgc
     9001 gccggtgacc acgtccaccc gttcgacgct gtcgtcggcc ttgatgcggt agacgaaggt
     9061 atcgcggccg acctgcacca cggcgatttc cggcaccacc agcgcctcgc gctcggggtg
     9121 gaacaggcgc acgtccagca gcatgcccgg gcgcagcgcg tggtcgccgt tggcgaaatc
     9181 agcgcgcacg gtcaccgcgc gggtggccgg gtcgatgcgc gcatcgatgg tgctgaccac
     9241 gccctcgaag gtacggcccg gccaggccac gctggtggcg ctgaccttgt cacccacgcc
     9301 cagcgcggcc agttccactt ccggcacctg gaaatcgatg tgcatgtgtt cgatgtcatc
     9361 cagcgtggcg atcaccgtgg tcggcgtcag cagcgtgccc gggctgacct gacggatgcc
     9421 gagcacgccg gcgaacggcg cgcgcacgcg acggtcaccg atgtccgact gcatctgcgc
     9481 cacgcgcgct tcggcggcat cgcggatcga cttctgcgta tccagcgtag cgctggacac
     9541 caggcgctgg gtggccagtt cgcgctggcg cttgtacagc tggtcggcct catggaaggt
     9601 ggcctgcgcc tgcaccagcg ccgcttcctg ggcctgcccg cgcagggtca cgatcggcgc
     9661 accggcggcg atgtgctggc cgctttcgaa gtgcaccttc tcgacaatct cgctgacctt
     9721 ggcggtgacg ctgatcgact cgcgcgcctt ggccgtgccc agtgcctgca gggtgtcgtt
     9781 ccactgcgtg ggctgcacca cctgcgcggt caccggcacc gcttcgccct gccgacgcgc
     9841 ggcggcctcc tgcttgcctg cgcacccggc cagcacggcc aggctgaggc caagggccag
     9901 ggtcgaagcg atacgagcca acatgaacgg tcctgattga tccacggccg ccgagtgtag
     9961 gcaagcgcct gcaaaatcgg tatgtgccaa gcgtttaccg gcgtggaacc agggccgcga
    10021 tagcgccttg aacccgttcc gtgcaaggct gccgtgggca gtgtcggcgt gtgtcggggt
    10081 gtatccagcc gcgcctgcag cgccggggat tgcccggcgc taccggtgac acgaacggat
    10141 caataccggt aattcacctt catccacacg ctgcgccccg gctcgttgat gcgcaccggg
    10201 tcggccggga agccgaagtc ggcgctgccg gccaggttca ggtgctcgct gtaggcccgg
    10261 tcgaacagat tgtcgacgcc cgcgctgagc tgcagctgcg aactgaaacg gtaggcggca
    10321 ttgagcgcga aggtggcgaa gccggcgctt ggtccaagat cctgggcgac gacgttgccc
    10381 tggccatctg cgacacggtg ctggtgggtc accgcgcgca gcagcgcacc ggcactccag
    10441 cgctggcctt cccagttcgc gctcagccgc gcttccagtg gcggcatctg tggcagcgga
    10501 cgctgctggt cgcggttctc gccccaggcg taggccagcg tgccacccag tttccattgt
    10561 tcggccacgc tcacctccag ccccgcttcg gcgccggcaa tgcgcgcgtc gacgttgctg
    10621 gcctggctca tgcccatcat gccgctgccg tggtaggtga acaggatgta gtcctggatc
    10681 tgcccggcat acgcagagac ccaggcctgc acgcgccgcc ccttgtactg cagacccacg
    10741 tcaagctggg tggtgcgctc gggctggatg ccggcaaacg cgttcggcgc gccagccggg
    10801 ccatggtcgg gcgagaacag ctcccagtag tcgggcatgc gctcactgcg accgaggccg
    10861 gcataccagg tcaggccatc ggccaggtcc tgttcgtagc gcaggaaacc gctgcccagc
    10921 cattccttgc ggcgctggcc cgcggtcgga ttgggcatgt tgcccatcat cccgcgaatc
    10981 gactgccgct cgtcgcgcac gctggcgcga tcgatgcgca ggccactgat ccagcgctgg
    11041 tcggtgccag cgccgagggt cagttcggta aatgcgccat agcgacggaa gttggcatcg
    11101 gtctcccagg cggcctggcg ataggtgtcg cggcccatgc ccatgcgacc gcgatggcgg
    11161 ctgtcctcac catccacacc ggccaccagc tgcacgtcct gccagcgcca ttcggaactg
    11221 acccggccgc cctgggtacg gcggtccaca ttggaggcca tcggcatcgg catcatgctg
    11281 tgcggattcg gcgtacgcag cgtgtagttg tccatcacgt ggtcggcctc gttgtagtac
    11341 acgttggcct gcaccgtgtc ccacgcgccg ggcaggttgc gtttctcgaa gcgcgcggcg
    11401 tagctggtgc gttcgaaggc agcgccatcc atgccacgcc cggcgtagcg cacgatcgca
    11461 tcaccggcac cagcggagat ttccagcagc gtgtcggcat ccggcgtcca gccgatggcc
    11521 acgtcgccgt tccacttgcg ccacttcgac ggcaccacat caccgttgcc atccttgtag
    11581 tcgtcggcct cggaacggtt gccactggcg cgcacgtaac cggtcgggtt gcccagggtc
    11641 aggtccagca cctggtcgtt gcggttgcgc gaaccgacca gcgcactggc gtcggcgcgc
    11701 aggcccggtt cttcgaagcg cggcgtatcg cgttcgaagc gcacggtgcc ggccgaggcc
    11761 cccgcgcccc agcgcacgct ctgcggcccc ttgatgatgg tcagccggtc gaagctttcg
    11821 ggcgcgatgt aggacagcgg attgtccatg cgtgacgggc aggcaccgat caggttgccg
    11881 tcgttgctga ggatgttcag gcgcgaaccg aacatgccac gcagcaccgg gtcgccgttg
    11941 gtgccgccgt tgcggatggc ggagaagccg ggaacggtct tgaggtaatc ggcaccgtcg
    12001 ctggccggta ccggctgccg tggcaggcgc ggatcggtca cccagtgcag tggtgaagac
    12061 ggtgcggcgg cggtcaccac catcgtgtcg agggtgcgcg cctcgtcggc gggcgcagcg
    12121 tgggccagtg acgcggccac ggccaggcca agggcaaccg gcaggcgcgc ataggcgccc
    12181 gcggggcggg aagtcatttt catcggaaca gctccagggt acgcacgcgc gcacggcgcc
    12241 cggtcaggcg tcgtgcggca gattcgatag ggacatcagc ggacgatgga agcgcgcggc
    12301 ggcccgcgtg cggcatgtgc cggccagcgc gcgatgggca acacgcgttg cgaccacggg
    12361 aacaccagcc gcggccgcca cagcagcggc aacagcagca ccagcacggc cagccacggc
    12421 agcaggcgca tggccagcac gcagtattcg caggcttcgc catgcatggc gtgcgggtcg
    12481 gccggacggc tgggcgatgc cggcgcggtg ccgtgctgat cgtggcccat ggcggcgtgg
    12541 tccatgccca cccttgccgc atgatccatc ggctgtgcct gcagcgcgcg gctgaccagt
    12601 ggcgcaagca ccatcagcag cgtcgccagg acggcgagct ggagcaggag gcgctgcggg
    12661 cgggacaggc gggtcacccc gctagtttag agccgggtcc agggatgccc gtgcgacgaa
    12721 ccgtcgcagg agggggggtt atcggcaggg ctgcgccctg cacccgccga atccacatca
    12781 acatcaacgt caaaagcggg c
//
LOCUS       DAOKIP010000109        12721 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.109,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000109 DAOKIP010000000
VERSION     DAOKIP010000109.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 12721)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12721)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12721
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.109"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            81..623
                     /locus_tag="QEL58_002522"
     CDS             81..623
                     /locus_tag="QEL58_002522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017157678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 glutamine amidotransferase"
                     /protein_id="HDS1676978.1"
                     /translation="MAQRLSGKQIAILATHGFEQSELTEPKRLLEAEGARVSVVSPAK
                     EATIKGWKDKDWGGVVAVDLPLDEADAGRFDAVVLPGGVINPDTLRTDEAALGFIRSV
                     AEAGKPVAAICHGPWLLINSGLADGRELTSWPSLQQDLANAGAKWRNAEVVVDGNVIT
                     SRKPDDIPAFSEAVVKALVA"
     gene            complement(637..1233)
                     /locus_tag="QEL58_002523"
     CDS             complement(637..1233)
                     /locus_tag="QEL58_002523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003487749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1439 domain-containing protein"
                     /protein_id="HDS1676979.1"
                     /translation="MRLRSLMTRLAASTVLIAAAIGAQAAPSISGRELSVGANDVQQY
                     LDGSFPRTQDALGGLIALTMSHPQLSLPAGERLNLGMDVALATAGGNPAKLGTVKLSS
                     GLRYDAQTQGFHLQQPSVDDFTPANQGGRLDSRTRGLLNAWLSDYAQREPIYKLDPAM
                     AGVLGALQVQSAQVKNGKLVVTFNQNLGNLVPAGILGK"
     gene            complement(1316..1864)
                     /locus_tag="QEL58_002524"
     CDS             complement(1316..1864)
                     /locus_tag="QEL58_002524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005408440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1676980.1"
                     /translation="MRRILLLIAPLALLGCSRPAAAPDAAPAAIPASTDQPSNASPTA
                     VPGGDPPAAQSPSVDPLFAAVAPDAEPPSVMLNRYVRALLNRDRRASDAAWTFPPGDA
                     RHADDAALRQLQEVRTLHLRSSTPIARNPAQPAQLLEVPVQVRAVTANGTFHFSGWYR
                     VQPSSDGRAWQIQSAHLQPTLD"
     gene            complement(1921..2229)
                     /locus_tag="QEL58_002525"
     CDS             complement(1921..2229)
                     /locus_tag="QEL58_002525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010483541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3861 family protein"
                     /protein_id="HDS1676981.1"
                     /translation="MASPSTRYRISVTPIEKDGLQCTGRCTIELEHRASRDLMRLLEA
                     APRTAGISGDERATLVIASQLLRDIVQRHAATDGHALAVIAAQVLPALDALDQLPSSR
                     "
     gene            complement(2489..2887)
                     /locus_tag="QEL58_002526"
     CDS             complement(2489..2887)
                     /locus_tag="QEL58_002526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HDS1676982.1"
                     /translation="MAKTAKKAAPKKAVKKVATKAAAKPAAPKPIKEVLTKSGLVAHI
                     AEASGVVAKDVRAVLASLESAVASSVHKKGAGSFTLPGLLKITTVNVAAKPKRKGINP
                     FTKEEQWFAAKPATTKLKVRPLKKLKDAAL"
     gene            3259..3690
                     /locus_tag="QEL58_002527"
     CDS             3259..3690
                     /locus_tag="QEL58_002527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004147570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HDS1676983.1"
                     /translation="MGISRHATAHWEGDLKSGKGLLSTPQSGLLDKTRYGFNSRFGDE
                     KGTNPEELIAAAHAGCFTMALSAKLGEAGFTPTSLDTEAKVDLSLEGGPQLSQIRLKV
                     KAVVPGIDAAQFRAIADDAKQNCPVSKALSAVPISLEAELG"
     gene            complement(3785..4663)
                     /locus_tag="QEL58_002528"
     CDS             complement(3785..4663)
                     /locus_tag="QEL58_002528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010369373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhzF family phenazine biosynthesis protein"
                     /protein_id="HDS1676984.1"
                     /translation="MSARRFLQLDVFSPRAGAGNPLAVVLDAEGLDDASMQAIARWTR
                     LPETTFVFPAQAAGTSYRLRMFSPQKEVPFAGHPSVGTAHAVLQAGLAAPVDGVLVQD
                     GIAGALPLRVSGEGAQQRIAIRTPRAQLAETTVASDPRLQAALKGWPLGTLPPARMQG
                     GRSWWVVQVADEAALRALHPEWDAVAALAESTDSMGVFAYAFADGNEGFDLAVRAFVG
                     NGRRFEDAASGAANAVLAAWLDLRDALPHGRAPFEVSQGREVGHDARLTLRVDEDGEV
                     WSGGQVQTVIAGTIDW"
     gene            complement(4784..5659)
                     /locus_tag="QEL58_002529"
     CDS             complement(4784..5659)
                     /locus_tag="QEL58_002529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005408445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhzF family phenazine biosynthesis protein"
                     /protein_id="HDS1676985.1"
                     /translation="MAAFRYLQLDVFAPHPGSGNPLGVVLGADGLSSARMQALAAWLN
                     LSETVFFLPPSAPGADYHIRIFTPNSELPFAGHPSVGAAWAAVTCGLATPRDGGALVQ
                     QCAAGLLPVRVSGAAASPTIELASPPAQRLPTDPGQVPGPLLALAAAGHAPELWDNGP
                     RWWLLPLRDAAAVRGLAPDMAALRDWTNATGATGVAVFADEAATDHARVVRAFCPGDA
                     VNVPEDPVTGSANALIGAWLRERVVLPGGSGAYVASQGREVGRDGRVHVRVDADGTVW
                     IGGQVQPVIDGQISW"
     gene            5735..8329
                     /locus_tag="QEL58_002530"
     CDS             5735..8329
                     /locus_tag="QEL58_002530"
                     /EC_number="2.7.2.4"
                     /EC_number="4.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014036288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional aspartate kinase/diaminopimelate
                     decarboxylase"
                     /protein_id="HDS1676986.1"
                     /translation="MSASPLVDRWIVLKFGGTSVSRRHRWDTIGKLAKKRAEETGSRV
                     LVVVSALSGVTNELTAIADGAPDSRDRVAALVERHEGFLVELGLGREVLAERLAALQG
                     LLDDPRAATRPLDWQADVLGQGELLSSTLGAAYLHASGLDMGWMDARQWLDAMPPQPN
                     QSDWSQRLSVNCQWRADADWMQRFRAQPTRLLITQGFISRHADGGTAILGRGGSDTSA
                     AYFGALLGASRVEIWTDVPGMFSANPKDVPDARLLTRLDYYEAQEIATTGAKVLHPRS
                     IKPCRDAGVPMAILDTERPQLPGTSIDGSAAPVPGVKAISRRNGIVLVSMEGIGMWQQ
                     VGFLADVFNLFKKHGLSVDLIGSAETNVTVSLDPSENLVNTDVLAALSADLSQICKVK
                     VIVPCAAITLVGRGMRSLLHKLSDVWATFGRERVHMISQSSNDLNLTFVIDEADADGL
                     LPILHAELIDSGAMPVEETEVFGPRWREIAGTVRPRGTPWWRGQRAHLLQLADAGTPR
                     YVYHLPTVRARARALAAIKPIDQRYYAIKANSHPAILQLLEAEGFGLECVSHGELKHV
                     FQHLPELSPKRVLFTPSFCPRSEYEAAFALGVTVTVDNVEALQRWPDLFRNRELWLRV
                     DLGRGEGHHAKVRTGGKDSKFGLPIARVDEFVRAATELGSRVVGLHAHLGSGVETAQH
                     WRLMCDELAGFARRIGSVQTIDIGGGLPIPYSDEDEPFDLDAWAEGLAEVKALHPAFR
                     LAIEPGRYLVAESGVLLTHATQVVEKDGVRRVGLDAGMNTLMRPALYDAWHDIENLSR
                     QGGYAEAAFDVVGPICESSDVFGKRRKLPVSTAPDDVMLIADAGAYGYVMSNTYNQRA
                     MPREDVIE"
     gene            8406..9758
                     /locus_tag="QEL58_002531"
     CDS             8406..9758
                     /locus_tag="QEL58_002531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010369381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease domain-containing protein"
                     /protein_id="HDS1676987.1"
                     /translation="MTAFDKHQVSRFRFVRCEFAADTGVARLVYAFDDGPEMVETITV
                     PGAPFVLDEARAAAVQRALQLLHLIAGVSYYKAGVPETVSIDSYAIDADTAALVETVY
                     LNGLGEFAYRNGLNLRGRFRLPVQGEAVQAPALGLQPHALVAIGGGKDSLVSIEALRR
                     AGVDETVTWIGGSQLIRACAERTGLPTLNLGRALAPELFELNRQGAWNGHIPVTAVNS
                     AIMVLAALLQGVDQVVFSNERSASYGSQIPGTGEVNHQWSKGWAFEQAFGSHVQAHVA
                     ADLHYYSLLRPMSELAVARQFAKTDFYDAHFSSCNRNFHILGERPVNRWCGVCPKCHF
                     VFLALAPFMPKTRLVRIFGRNLLDDAEQAGGFDALLEFQDHKPFECVGEGRESRAAMA
                     TLAQRPEWKEDVLVKRFCNEIQPQLDAAELELAPLLQLQGEHRVPAALWERVREDFEA
                     "
     gene            9739..11148
                     /locus_tag="QEL58_002532"
     CDS             9739..11148
                     /locus_tag="QEL58_002532"
                     /EC_number="6.3.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanine--D-glutamate
                     ligase"
                     /protein_id="HDS1676988.1"
                     /translation="MKISKLEGKRVALWGWGREGRAAFAVLRERLPSLPLSLFCPAAE
                     AEAARTETQGALDVRGEPSAEALAAFDVVIKSPGISPYQPIALAAAEQGTSFIGGTAL
                     WFAEHAADDGIVHDTVCVTGTKGKSTTTALVAHLLRAAGHRTGLVGNIGLPLLEVLDP
                     QSAPEYWAVELSSYQTGEVARSGAHPQVAVVLNLFPEHLDWHGSEQRYIEDKLRLVTE
                     AAPRIAVLNAADPHLAALSLPDSEVVWFNQPQGWHMRGDIVHRGEQAVFDTRNTPLPG
                     RHNRGNLCAVLAALEALGLDAVALAPAVQDFRPLPNRLQRIGVADGLAYVNDSISTTP
                     HASLAALECFAGQRIALLVGGHDRGLDWTDFMQHMAHDVPPVEIVTMGSNGPRIHAML
                     QPLADAGRFGLHAASDLPEAMALARAALGEQGGVVLLSPGAPSFGTYRDYVARGRHFA
                     ELAGFDPDSISAIPGLGIA"
     gene            complement(11209..11802)
                     /locus_tag="QEL58_002533"
     CDS             complement(11209..11802)
                     /locus_tag="QEL58_002533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005412540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMI1/KNR4 family protein"
                     /protein_id="HDS1676989.1"
                     /translation="MNLADRFLSGLIPRLAADDAPQWAHVRGASADDLQRLRAQWPQV
                     PDSLVVLLSRVDGTHFRDYPGGEVCVLMLGSDVEDGGYPYYLRSVAQIFEDQQQWDDS
                     IRSIYEEWLDDEPEILGDGIDADLPMSRRLCFSHCMNNGGTSMLYLDFDPAPGGRVGQ
                     VVRYLHDPDSYAVIAPSFDAYLQQLIDGDYAFIEDEQ"
     gene            11934..12719
                     /locus_tag="QEL58_002534"
     CDS             11934..12719
                     /locus_tag="QEL58_002534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014036294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HDS1676990.1"
                     /translation="MNRWRCGVAVMLGLAAMPAWAAMKTQPVEWKHQGTTFSGVLVYD
                     DGEHDKRPGLVMVPNWKGVNESAVEKAKQLAGDDYVVLVADVYGKGVRPKTDAEAGPV
                     AIKLRNDRPLLRARALEAVNVLKAQAGKVPLDASRIGAVGFCFGGTTVLELARAGAPL
                     AGVVSLHGGLGSPLPAQAGGSHPSVLVLNGADDTSVTAEDIAGFQKEMNAAKVDWEFT
                     NYSGAVHCFAERDANSPPGCQYNERAAKRAWKALDEFFEERFL"
BASE COUNT         2020 a         4148 c         4526 g         2027 t
ORIGIN      
        1 acctgccgtg cacggtcggg tcaccgccgt tcaatggctc cccgcgcacg ctgtcggctc
       61 ctttcgatgg agcatccgac atggctcagc gtctcagcgg caagcagatt gccatccttg
      121 ccacgcacgg cttcgaacag tccgaactga ccgaacccaa gcgcctcctg gaggcggaag
      181 gcgcacgcgt cagcgtggta tcgcctgcga aggaggcgac catcaagggc tggaaagaca
      241 aggactgggg tggcgtggtg gcggtagacc tgccgctgga cgaggccgat gccggccgct
      301 ttgatgccgt ggtgctgccc ggtggcgtca tcaatccgga cacgctgcgc accgatgagg
      361 cggcgctggg tttcatccgc agcgtcgccg aggccggcaa gcctgttgcc gccatctgcc
      421 atggtccgtg gctgttgatc aacagcggcc tggccgatgg acgcgagctg acctcgtggc
      481 catccctgca gcaggacctc gccaatgccg gcgccaagtg gcgcaacgcc gaggtcgtgg
      541 tggatggcaa tgtcatcacc agccgcaagc cggatgacat tccggctttc agcgaggcag
      601 tagtgaaagc actggtggcg tgaggccggc cctgccttac ttgccgagga tgccggccgg
      661 caccaggttg cccaggttct ggttgaaggt aaccaccagc ttgccgttct tcacctgcgc
      721 cgactgcacc tgcagcgcgc ccagcacgcc ggccatggcc gggtccagct tatagatggg
      781 ctcgcgctgg gcgtagtcgc tcagccaggc attgagcaga ccacgggtgc gcgagtcgag
      841 acggccaccc tggttggccg gggtgaagtc atccacgctc ggctgctgca ggtggaagcc
      901 ctgggtctgc gcgtcatagc gcaggccgct gctgagcttc accgtgccca gcttggccgg
      961 gttgccgccg gcggtggcca gtgccacgtc catgcccagg ttcaagcgtt cgccggccgg
     1021 aaggctcagc tgcgggtggc tcatggtcag ggcgatcagg ccgcccagtg cgtcctgggt
     1081 gcgcgggaag ctgccgtcga ggtactgctg cacgtcgttg gcacccaccg acagttcgcg
     1141 gccagaaatg gagggggcgg cctgcgcacc gatcgcggca gcgatcagca cggtggaggc
     1201 ggcgaggcgg gtcatcaggg aacgcaggcg catggcagtg accggtggct ctggaatgga
     1261 tgggagaaag agtagccgcg ccggctgaat cgtgcgtgca tgcggctgca acggttcagt
     1321 ccagcgttgg ctgcaggtgc gccgactgga tctgccaggc gcggccgtcg ctgctgggct
     1381 gcacgcggta ccagccgctg aaatggaagg tgccgttggc ggtgactgca cgcacctgca
     1441 ccggcacctc cagcagctgc gcgggctgtg ccgggttgcg ggcaatcggc gtactgctgc
     1501 gcaggtgaag cgtgcgcact tcctgcagct ggcgcagcgc ggcgtcgtcg gcatgccggg
     1561 catcaccggg tgggaaggtc catgccgcat cactggcgcg gcgatcgcga ttgagcagtg
     1621 cgcgcacgta gcggttgagc atcaccgagg gcggctcggc atcgggggcc actgcagcga
     1681 acagcgggtc gaccgaaggc gattgcgcag ccggtgggtc gccgccgggc actgcggttg
     1741 gcgacgcgtt cgacggctga tcggtgctgg ccggtatcgc ggcaggtgcc gcatccggtg
     1801 cggctgccgg ccgcgagcag cccagcagcg ccaggggcgc aatcaacaac aggatacggc
     1861 gcatgcctgc ctcctccccg aggcaaccgt gagagcgcca gtgtatcgag tgcgtggcgg
     1921 tcagcgcgag gaaggcagct ggtccagcgc gtccagtgcc ggcagcacct gtgcggcgat
     1981 gactgccagc gcgtggccgt cggtcgcggc gtgacgctgc acgatgtcgc gcagcagctg
     2041 gctggcgatc accagggtgg cgcgctcgtc gccgctgatg ccggccgtac gcggtgcagc
     2101 ttccagcagg cgcatcaggt cgcggctggc gcggtgttcc agttcgatgg tgcagcgccc
     2161 ggtgcactgc aacccgtcct tttcgatggg ggtcaccgag atccggtagc gggtggaggg
     2221 gctggccatg aggggtgctc gccgtagctg tggaggatgg gcccacgata ggcaagcccg
     2281 cggccgacgg cgacggccgg cgctgcacgc agtgttccac ccggtacgtt ccgggcctgg
     2341 acccgaccgc gcccggtcaa tggtggcggg cctggacgcg tatttcccgg gatccggcaa
     2401 cgctgtgttg cgggcgcggg cgcgggcgcg ggcaaaaaaa acgggacggc cagagccgtc
     2461 ccgtcggagt ccgcgtcggg gcgcgcgctt acagcgcggc gtccttcagc ttcttcagcg
     2521 gacgcacctt cagcttggtg gtggccggct tggcggcgaa ccactgttct tccttggtga
     2581 acgggttgat gcccttgcgc ttcggcttgg ccgccacgtt gacggtggtg atcttcagca
     2641 ggcccggcag ggtgaaggag cctgcgccct tcttgtgcac cgaggaggcg acggcgcttt
     2701 ccagcgaggc cagcacagcg cggacgtcct tggcgacgac gccggaggct tcagcgatgt
     2761 gtgcaaccag gccggacttg gtcagcactt ccttgatcgg cttcggagcg gccggcttgg
     2821 cggctgcctt cgtagcgact ttcttcactg ccttcttcgg ggcagccttc ttagcggtct
     2881 ttgccatggt ttcctgttcc gtgaacggtt ggttgtttgg tcggcgccga accccgtcgg
     2941 caagcgcaat gtagggcaac tctcgggcgc cgccaatagc ccgaagcgcg gaaagtgcat
     3001 gttttttcat atccaggccg attcagtaca tggccggtgg cggggaatgg ggccgtcctg
     3061 gcgtgccggg tgggcgcttc ccgatcaccg ggggggtgtg cgaaaccact gaaaacaagg
     3121 ggaaaatgca ggtcgggctg gtgaggaagt gtccagttgc ccggtttccg gcggacgatt
     3181 ggcatgcggc ggagcgacgc agggataacg cggtccatgc gaaggtggcc gttcatcacc
     3241 gccacgcagg agcagcatat gggaatctca cgacacgcca ccgcgcactg ggaaggcgat
     3301 ctgaagtcgg gcaagggact gttgagcacg ccgcagagtg ggctgctgga caagacccgc
     3361 tacggcttca acagccgttt tggcgacgag aaagggacca atccggaaga actgatcgcc
     3421 gccgcgcatg ccggctgttt caccatggcg ctgtcggcca agctgggcga agcgggcttc
     3481 accccgacct cgctggacac cgaagccaag gtcgacctgt cgctggaagg cggtccgcag
     3541 ctgtcgcaga tccggctgaa ggtgaaggcg gtggtgccgg gcatcgacgc cgcacagttc
     3601 cgcgccatcg ccgatgacgc caagcagaac tgcccggtgt ccaaggcgct gagcgcagtg
     3661 ccgatcagtc tggaagccga gctgggctga gaattcgcgg gccgggaggg ttgcggtagt
     3721 gccggccgct ggccggcaac cgcatgctgc cgatgtccag gtaacagccg gccagcggcc
     3781 ggctctacca atcaatggtg ccggcaatca ccgtctgcac ctggcccccc gaccagacct
     3841 cgccgtcttc atcgacccgc agggtcaggc gcgcatcgtg gccgacttcg cggccctggc
     3901 tgacttcgaa cggtgcgcgg ccatgcggca gcgcatcgcg caggtccagc catgccgcca
     3961 gcaccgcgtt ggcggcgccc gaggccgcat cctcgaagcg ccggccgttg ccgacgaagg
     4021 cgcgcacggc cagatcgaat ccctcgttgc catcggcgaa cgcataggca aacacgccca
     4081 tgctgtcggt ggattcggcc agcgcggcca ccgcatccca ctccggatgc agggcgcgca
     4141 acgcggcttc atcggccacc tgcaccaccc accagctgcg cccgccctgc atgcgggccg
     4201 gcggcagcgt gcccagcggc cagcccttca gcgcggcctg caggcgggga tcgctggcca
     4261 cggtggtctc ggccagctgt gcccgcgggg tacggatggc gatgcgctgc tgcgcgcctt
     4321 cgccgctgac gcgcaggggc agggcgcccg cgatgccgtc ctgcaccagc acgccgtcga
     4381 ccggcgctgc caggcctgcc tgcagcaccg catgcgcggt accgacgctg ggatggccgg
     4441 cgaacggcac ttccttctgc gggctgaaca tgcgcagtcg gtagctggtg cctgccgcct
     4501 gcgccggaaa cacgaaggtg gtctcgggca ggcgcgtcca gcgcgcgatg gcctgcatgc
     4561 tggcatcgtc gaggccttcg gcatcgagca ccacggccag tggattgccg gcgccggcgc
     4621 gcggggagaa cacatccagc tgcaggaaac gtcgtgcgga catcagtcag gaactccagt
     4681 aaacaggcgg catagggtag cgcggcgcac aaaaaagggg acggagggaa tcaagtcgct
     4741 tgtggcacaa acgacttgat tccctccgtc ccctctttcg gcgttaccag ctgatctggc
     4801 cgtcgatcac cggctgcacc tggccgccga tccacaccgt gccgtcggca tccacgcgca
     4861 cgtggacgcg gccgtcgcgg ccgacttcgc ggccctggct ggcgacatag gcgccgctgc
     4921 cgccgggcag cacgacgcgc tcgcgcaacc aggcaccgat cagcgcattg gcgctgccgg
     4981 tgaccgggtc ctcgggcacg ttcaccgcat cgccggggca gaacgcgcgc acgacgcggg
     5041 catggtccgt tgcggcttcg tcggcgaata ccgcgacgcc ggttgcgcca gtggcattgg
     5101 tccagtcgcg cagggcggcc atgtccgggg ccagtccgcg cacggcggcg gcgtcacgca
     5161 gcggcagcag ccaccagcgc gggccgttgt cccacagttc gggcgcatgc ccggcggcgg
     5221 ccagcgccaa cagcggcccg ggcacctggc ccgggtcggt cggcaggcgc tgtgccggtg
     5281 ggctggccag ttcgatggtt ggagaagcgg cggcaccact cacccgcacc ggcagcaggc
     5341 cggcagcgca ttgctggacc agcgcgccgc cgtcgcgcgg cgttgccagg ccgcaggtga
     5401 ctgcagccca ggccgcgccc acgctggggt ggccggcaaa tggcagttcg ctgttcgggg
     5461 tgaagatgcg gatgtggtag tcggcgcccg gggcgctggg cggcaggaag aacaccgtct
     5521 cggacaggtt cagccaggcg gcaagggcct gcatgcgggc gctggagagc ccatcggcgc
     5581 ccagcaccac gcccagcgga ttgccgctgc cggggtgggg ggcgaagaca tcgagctgca
     5641 ggtagcggaa ggcggccatc ggcgggtcca ttgggcttag aatcgaaggt tccgccccct
     5701 cgggcggctc ccccacatta cacatagcct atccatgtca gcttcccccc ttgtcgatcg
     5761 ttggatcgta ctgaagttcg gcggcacctc ggtgtcgcgt cgccaccgct gggacacgat
     5821 cgggaagctg gcgaaaaaac gtgcggaaga aaccggttcg cgcgtgctgg tggtggtctc
     5881 ggcgctgtcc ggggtcacca acgaactgac cgcgatcgcc gacggtgcgc cggacagccg
     5941 cgaccgcgtg gcggcactgg tcgagcgcca cgagggcttc ctggtcgagc tgggcctggg
     6001 ccgcgaggtg ctggccgagc gcctggccgc gctgcagggc ctgctggatg atccgcgtgc
     6061 ggccacccgc ccgctggact ggcaggccga cgtgctgggc cagggcgagc tgctgtcctc
     6121 cacgctgggc gcggcctacc tgcacgcctc gggcctggac atgggctgga tggatgcccg
     6181 ccagtggctg gacgcgatgc cgccgcagcc gaaccagagc gactggtcgc agcggctgtc
     6241 ggtgaactgc cagtggcgcg cggacgcaga ctggatgcag cgcttccgcg cgcagccgac
     6301 ccgcctgctg atcacccagg gcttcatctc gcggcatgcc gatggcggta ccgccatcct
     6361 cggtcgtggt ggttcggata cctcggcggc gtacttcggc gcgctgctcg gcgccagccg
     6421 cgtggagatc tggaccgacg tgccgggcat gttcagcgcc aatccaaagg acgtgccgga
     6481 cgcgcgcctg ctgacccgcc tggactatta cgaagcacag gaaatcgcca ccaccggcgc
     6541 caaggtgctg cacccgcgct cgatcaagcc ctgccgtgac gccggcgtgc cgatggccat
     6601 cctcgatacc gagcgcccgc agctgccggg taccagcatc gatggcagtg cggctccggt
     6661 gccgggcgtg aaggcgatca gccgccgcaa cggcatcgtg ctggtgtcga tggaaggcat
     6721 cggcatgtgg cagcaggtcg gcttcctggc cgatgtgttc aacctgttca agaagcatgg
     6781 cctgtcggtg gacctgatcg gttcggccga gaccaacgtc accgtgtcgc tggacccgtc
     6841 cgagaacctg gtcaacaccg atgtgctggc cgcgctgtct gccgacctgt cgcagatctg
     6901 caaggtgaag gtgatcgtgc cgtgcgcggc gatcaccctg gtcggccgtg gcatgcgctc
     6961 gctgctgcac aagctgtcgg acgtgtgggc caccttcggc cgcgagcgcg tgcacatgat
     7021 ctcgcagtcg tccaatgacc tgaacctgac cttcgtcatc gacgaagccg atgccgatgg
     7081 cctgctgccc atcctgcatg ccgagctgat cgacagcggc gcgatgccgg tggaggagac
     7141 cgaagtgttc ggcccgcgct ggcgcgagat cgccggcacc gtgcgcccgc gtggcacgcc
     7201 gtggtggcgc ggccagcgtg cgcacctgct gcagctggcc gatgccggta cgccgcgcta
     7261 cgtctaccac ctgccgacgg tgcgcgcccg cgcccgcgcg ttggccgcga tcaagccgat
     7321 cgaccagcgc tactacgcga tcaaggccaa cagccacccg gccatcctgc agctgctgga
     7381 agccgaaggc ttcggcctgg aatgcgtctc gcacggcgag ttgaagcatg tgttccagca
     7441 cctgccggag ctgtcgccca agcgcgtgct gttcaccccc agcttctgcc cgcgcagcga
     7501 gtacgaagcg gcgttcgcgc tgggcgtgac cgtcaccgtc gacaacgtcg aagcactgca
     7561 gcgctggccg gacctgttcc gcaaccgcga gctgtggctg cgcgtcgatc tcggccgtgg
     7621 cgaaggccac catgccaagg tccgtaccgg cggaaaggac tccaagttcg gcctgccgat
     7681 cgcccgcgtc gacgagttcg tgcgtgcggc caccgagctg ggcagccgcg tggtcggcct
     7741 gcatgcgcac ctgggcagcg gcgtggagac cgcgcagcac tggcgcctga tgtgcgatga
     7801 gctggccggt ttcgcccgcc gcatcggcag cgtgcagacc atcgacatcg gcggtggcct
     7861 gccgattccc tacagtgatg aagacgaacc gttcgacctg gatgcctggg ccgagggcct
     7921 ggccgaggtc aaggcgctgc acccggcgtt ccgcctggcg atcgagccgg gccgctacct
     7981 ggtggccgaa tccggcgtgc tgctgaccca tgccacccag gtggtggaga aggacggcgt
     8041 gcgccgcgtc ggcctggacg ccggcatgaa caccctgatg cgcccggcgc tgtacgacgc
     8101 ctggcatgac atcgagaatc tcagccgcca gggcggttat gccgaagccg cgttcgatgt
     8161 ggttggcccg atctgcgaat ccagcgatgt gttcggcaag cgccgcaagc tgccggtatc
     8221 gaccgcaccg gacgatgtga tgctgatcgc cgatgccggt gcctacggct atgtgatgtc
     8281 caacacctac aaccagcggg cgatgccgcg cgaagacgtg atcgaatgat cgccacccgc
     8341 gcattgcacc cgcccaccga cacgctccgc gccatcgcgc gggcccgtgc ctgaccggat
     8401 acaccatgac tgcttttgac aaacaccagg tttcccgctt ccgcttcgtc cgctgcgaat
     8461 tcgctgcgga taccggcgtg gccaggctgg tctacgcctt tgatgacggc ccggagatgg
     8521 tggaaaccat caccgtgccc ggcgcgccgt tcgtgctgga cgaggcgcgt gccgctgccg
     8581 tgcagcgcgc gctgcagctg ctgcacctga ttgccggtgt cagctactac aaggcgggcg
     8641 tgccggagac ggtcagcatc gacagctacg ccatcgatgc cgacaccgcg gcgctggtgg
     8701 agacggtcta cctcaacggc ctgggcgaat tcgcctaccg caacggcctg aacctgcgcg
     8761 gtcgcttccg cctgccggta cagggcgaag cggtgcaggc gccggcactg ggcctgcagc
     8821 cgcacgcgct ggtggccatc ggtggcggca aggattcgct ggtcagcatc gaagcgctgc
     8881 gccgtgccgg cgtggacgag acggtgacct ggatcggggg ctcgcagctg atccgcgcct
     8941 gcgccgagcg taccggcctg ccgacgctga acctgggccg cgcgctggcg ccggaactgt
     9001 tcgagctcaa tcgccagggc gcctggaacg gtcatatccc ggttactgcg gtgaactcgg
     9061 cgatcatggt gctggccgcg ctgctgcagg gcgtggacca ggtggtgttc tccaacgaac
     9121 gctcagccag ctacggcagc cagattccgg gcaccggtga agtgaaccac cagtggtcca
     9181 agggctgggc attcgagcag gcgttcggca gccatgtgca ggcgcacgtc gctgcggacc
     9241 tgcattacta ctcgctgctg cggccgatgt cggagctggc ggtggcccgc cagttcgcca
     9301 agaccgattt ctacgacgcg cacttctcca gctgcaaccg caacttccac atcctcggcg
     9361 agcgcccggt gaaccgctgg tgcggcgtct gcccgaagtg ccacttcgtg ttcctggcgc
     9421 tggccccgtt catgccgaag acacgcctgg tgcgcatctt cggccgcaac ctgctggatg
     9481 atgccgagca ggccggtggc ttcgacgcgc tgctggagtt ccaggaccac aagccgttcg
     9541 agtgcgtggg cgaaggccgc gaatcgcgtg cggcgatggc gacgctggcg cagcgcccgg
     9601 aatggaagga agacgtgctg gtgaagcgct tctgcaacga gatccagccg cagctggacg
     9661 ccgccgaact ggaactggcg ccgctgctgc agctgcaggg cgagcaccgc gttccggctg
     9721 cgctgtggga acgggtgcgt gaagatttcg aagcttgagg ggaagcgcgt tgcgctgtgg
     9781 ggctggggcc gtgagggccg tgcggctttc gcggtgctgc gcgagcggct gccgtcgctg
     9841 ccgctgagcc tgttctgtcc ggctgctgaa gccgaggccg cgcggacgga aacgcagggc
     9901 gcgctggacg tgcgtggtga gccctcggcc gaagcgctgg cggcgttcga tgtggtgatc
     9961 aagtcgcccg gcatcagccc ttaccagccg attgcgctgg cggcggcgga gcagggcacg
    10021 tctttcatcg gcggtaccgc gctgtggttt gccgaacacg cggccgacga cggcatcgtg
    10081 cacgacaccg tgtgcgtgac cggcaccaag ggcaagagca ccaccaccgc gctggtcgcg
    10141 cacctgctgc gcgcggcggg gcatcgcacc ggtctggtcg gcaacatcgg cctgccgctg
    10201 ctggaagtgc tggacccgca gtcggcgccc gagtactggg ccgtcgagct gtccagctac
    10261 cagaccggcg aagtggcgcg cagtggcgcc catccacagg tggcggtggt gctgaacctg
    10321 ttccccgagc acctggactg gcacggcagc gagcagcgtt acatcgagga caagctgcgg
    10381 ctggtgactg aagccgcgcc gcgcatcgcc gtgctcaatg ccgcagatcc gcacctggcc
    10441 gcgctgtcgc tgcccgacag cgaggtggtc tggttcaacc agccgcaggg ctggcacatg
    10501 cgcggtgaca tcgtgcaccg gggcgagcag gccgtgttcg atacccgcaa cacgccactg
    10561 ccgggccggc acaaccgcgg caacctgtgc gcggtgctgg ccgcgctgga agccctggga
    10621 ctggacgcgg tggcgctggc gccggcggtg caggatttcc gtccgttgcc gaaccgcctg
    10681 cagcgcatcg gtgtggccga tggcctggcc tacgtcaacg attcgatcag caccacgccg
    10741 catgccagcc tggcggcgct ggaatgcttc gccggccagc gcatcgcgct gctggtgggc
    10801 gggcacgacc gtggcctgga ctggaccgat ttcatgcagc acatggcgca tgacgtgccg
    10861 ccggtcgaaa tcgtgaccat gggcagcaat ggcccgcgca tccacgcgat gctgcaaccg
    10921 ctggccgatg ccggccgctt cggcctgcac gccgcatctg atctgccgga ggcgatggcg
    10981 ctggcacgcg cggcgctggg cgagcagggc ggcgtggtgc tgctgtcgcc gggcgcaccg
    11041 agctttggta cctaccgtga ttacgtggcc cgcggccgcc acttcgccga actggccgga
    11101 tttgatccgg acagcatcag cgcgattccg ggcctgggca tcgcttgaag gtagtgccgg
    11161 ccgctggccg gcaacctccg cagaaattca tccacgcatg gcgtggatct actgttcgtc
    11221 ttcgatgaac gcgtagtcgc cgtcgatcaa ctgctgcagg tacgcatcga agctgggcgc
    11281 gatcaccgcg tagctgtccg ggtcgtgcag gtagcgcacg acctggccca cgcggccacc
    11341 cggcgcggga tcgaaatcca ggtacagcat cgaggtgccg ccgttgttca tgcagtgcga
    11401 gaagcacagg cggcgactca tcggcaggtc ggcatcgatg ccatcgccga ggatttccgg
    11461 ctcgtcatcc agccattcct cgtagatcga acggatgctg tcgtcccact gctgctggtc
    11521 ttcgaagatc tgtgcgactg agcgcaggta gtacggatag ccgccgtctt ccacgtccga
    11581 gccgagcatc agtacacaga cctcgccacc ggggtagtcg cggaagtggg tgccatccac
    11641 gcgcgacagc agtaccacca ggctgtccgg cacctgtggc cattgcgcgc gcaggcgctg
    11701 caggtcgtcg gcgctggcgc cccggacatg ggcccactgg ggggcgtcat cggcagccag
    11761 gcgtgggatc agtccggaca gaaagcgatc agcaaggttc atgcggaaaa aagggacgga
    11821 ggggattaag tcgtatccaa ccacacctgc gtcacgtcgc caatgcagaa tgcgacgtgg
    11881 gaggggtgaa tacggcttaa tcccctccgt cccctttttt gcggagcagg cgcatgaatc
    11941 gttggcgatg cggtgtggcg gtgatgctgg ggctggcggc gatgccggcg tgggcggcga
    12001 tgaagacgca gccggtggaa tggaagcacc agggtacgac cttcagtggt gtgctggtct
    12061 atgacgatgg cgagcacgac aagcgcccgg gcctggtgat ggtgccgaac tggaaaggcg
    12121 tgaacgaatc ggcggtcgag aaggccaagc agctggccgg cgatgactat gtggtgctgg
    12181 tggccgatgt ctacggcaag ggcgtgcggc cgaagaccga tgccgaggcc ggcccggtgg
    12241 cgatcaagct gcgcaacgac cggcccctgc tgcgcgcacg cgcgttggag gcggtgaacg
    12301 tgctcaaggc acaggccggc aaggtgccgc tggatgccag ccggatcggt gcggtgggct
    12361 tctgcttcgg gggcaccacg gtgctggagc tggcccgtgc cggtgcgccg ctggccggcg
    12421 tggtcagcct gcacggcgga ttgggttcgc cactgccggc acaggccggt ggcagccacc
    12481 cgtcggtgct ggtgctcaac ggcgccgacg acaccagcgt gaccgccgag gacatcgccg
    12541 gtttccagaa ggaaatgaac gccgccaagg tcgactggga attcaccaac tacagcggcg
    12601 cggtgcactg cttcgccgag cgcgatgcca acagcccgcc gggctgccaa tacaacgaac
    12661 gggcggcaaa gcgggcgtgg aaggcgctgg atgagttctt cgaggaacgt ttcctgtaaa
    12721 g
//
LOCUS       DAOKIP010000110        12629 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.110,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000110 DAOKIP010000000
VERSION     DAOKIP010000110.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 12629)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12629)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12629
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.110"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..838)
                     /gene="psd"
                     /locus_tag="QEL58_002535"
     CDS             complement(<1..838)
                     /gene="psd"
                     /locus_tag="QEL58_002535"
                     /EC_number="4.1.1.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006381472.1"
                     /note="Phosphatidylserine decarboxylase is synthesized as
                     a single chain precursor. Generation of the pyruvoyl
                     active site from a Ser is coupled to cleavage of a Gly-Ser
                     bond between the larger (beta) and smaller (alpha chains).
                     It is an integral membrane protein; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylserine decarboxylase"
                     /protein_id="HDS1676991.1"
                     /translation="MSLTTALTYVLPHRLLSSMARSLAYSDDPRVSRWLIDTVTRKFN
                     VNLDEAANPDPRSYATFNQFFTRALKPGARVADADPRSLVMPADGRISQLGKIEAGRI
                     FQAKGQSFTAAELLGSDEDAKPYNDGLYATVYLSPRDYHRVHMPWTGTLRETVHVPGR
                     LFSVGPAAVNGVPRLFARNERLVCHFDTSFGPMVSVMVGALLVSGVETVWSGEEIPAY
                     GDRITRKDYRGQGIQLERFAEMARFNYGSTVIVLLPPGVAEFAPQLGAESPVQLGQAL
                     ATL"
     gene            complement(835..1485)
                     /locus_tag="QEL58_002536"
     CDS             complement(835..1485)
                     /locus_tag="QEL58_002536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019302734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCO family protein"
                     /protein_id="HDS1676992.1"
                     /translation="MFNRNAGIILLIALAAGLGLLAAQQVFAPKPPANAPATEAITLY
                     PHTRELPDFNLAQSDGTRLIPGELKGHWTLVFLGFTFCPDVCPTTLAELAGAQNQWEA
                     LPDSLRPRVLFISVDPDRDSATRLGEYVHGFHKDTLAATADVPSLERFATSLGFVFQK
                     VPGKHFDENPEDYTVEHSASLAVLDPQGRLAGLVRPPFNAPAIARDLQKLTEKTAP"
     gene            1608..2537
                     /gene="prmB"
                     /locus_tag="QEL58_002537"
     CDS             1608..2537
                     /gene="prmB"
                     /locus_tag="QEL58_002537"
                     /EC_number="2.1.1.298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008264512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3 N(5)-glutamine
                     methyltransferase"
                     /protein_id="HDS1676993.1"
                     /translation="MTAETAAELHTIIDLIRYGTSRFNEAGLTFGHSYDNALDEATQL
                     VLHSLHLPHDLGPAYGQARLLQAEKQRVLELFQRRIDERIPAAYLTGEAWFAGLSFKS
                     DKRALVPRSPIAELIECGFEPWLAGRDVYRALDLCTGSGCIAIAMGHYYPNWQVDGVD
                     LSDDALSLAEENRERLQAYNVNLVKSDLFNGLSGRHYDLIVTNPPYVTNDETDALPKE
                     YSYEPDMGLRAGDDGLDLVLKILRDAPLHLSEDGLLICEVGESEQHLIKLLPEVDFAW
                     IEFKVGQMGIFAVECRELIAHSARITELAAQRP"
     gene            2534..3637
                     /gene="aroC"
                     /locus_tag="QEL58_002538"
     CDS             2534..3637
                     /gene="aroC"
                     /locus_tag="QEL58_002538"
                     /EC_number="4.2.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008264593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate synthase"
                     /protein_id="HDS1676994.1"
                     /translation="MSSNSFGKLFTVTTFGESHGPAIGCVIDGCPPGLALDAAEFAHD
                     LQRRATGKSRHTSARREADEVEILSGVYEGLTTGTPIALLIRNTDQRSKDYANIGQQF
                     RPGHADYSYWHKYGIRDPRGGGRSSARETTMRVAAGVVAKKWLAERFGVTVRGYLSQL
                     GDITPAGFDWSAVEDNPFFWPHAAQVPELEAYMDALRKSGDSVGACVDVVADNVPPGW
                     GEPIYGKLDGELAAALMSINAVKGVEIGDGFASAAQKGTEHRDLLTPQGFASNHAGGI
                     LGGISTGQPVVASIVLKPTSSLRLPGPSLDTAGNVVEVVTTGRHDPCVGIRATPIAEA
                     MVAMVLMDQALRHRAQCGDVGTITPRIPGQIDG"
     gene            3630..4667
                     /locus_tag="QEL58_002539"
     CDS             3630..4667
                     /locus_tag="QEL58_002539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005417979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycerate dehydrogenase"
                     /protein_id="HDS1676995.1"
                     /translation="MADTRPTVWVSQPLIDAAIAPLRDRVQLRVTDTVTAWSPQQIAE
                     RLASVDGAIITLNERIGAAQVADAAQLQVIANVGVGYNNLDVDALSAAGILASNTPDV
                     LTETTADLGFALLMATARRITESERWLREGQWQQWSFQTMLGADIHGSTLGILGMGRI
                     GQGIARRGALGFGMKVLYHNRSQLPADTEAALGATYVDLDTLLAQSDHLLLVLPYTPA
                     SHHLIDAAALAKMKPSATLVNIARGGLVDEIALADALANGRLAAAGLDVYEGEPAVRP
                     ELLALRNVVLTPHIGSASLATRTAMVQLAVDNLVAGLGLDGDPSRMPSAINADAAMAA
                     RVTLGKKTGKR"
     gene            4760..5788
                     /locus_tag="QEL58_002540"
     CDS             4760..5788
                     /locus_tag="QEL58_002540"
                     /EC_number="1.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010483049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate-semialdehyde dehydrogenase"
                     /protein_id="HDS1676996.1"
                     /translation="MSNAQRSFHVAVVGATGAVGETMLSILEERHFPVGTLSVLASER
                     SAGGEIEFNGQKVTVQDLATFDPTGVEIALFSAGGSVSKEYAPKFAAAGAVVIDNSSA
                     FRYDDDVPLVVSEVNPEQVANRPRGIIANPNCSTMQMLVALAPLHRKYGIERINVSTY
                     QSVSGGGRSATEELGKQTGQLLSFQEIDPQRFPVQIAFNLIPHIDDFQDNGFTKEEMK
                     LIWETRKILGDDSILVNPTAVRVPVFYGHSESVAIETRDKVTVAEARALLEQSPGIEV
                     VDRHEAGGYPTPVTHASGTDAVYVGRIREDLSHPRGLNLWIVSDNVRKGAALNAVQLA
                     ELVAAEQR"
     gene            5893..7902
                     /locus_tag="QEL58_002541"
     CDS             5893..7902
                     /locus_tag="QEL58_002541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005414088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein FimV"
                     /protein_id="HDS1676997.1"
                     /translation="MNKRARGATRPLSYLSAALLALASSSALALGLGDIRVLSKPGQP
                     LLAEIPVVSADPSELENLRVALASPVTFERVGLQRPTGLVSELQFELTRNAQGRAVVR
                     VTSQAPVETPSLSFLIEADWGQGRLVREYSALVDAPSSALAVAEPEIVAPAGTLSNTI
                     AREPAAAPVAEAPGTPPSAPAPTPAPAPARSRAVPPPVAAIPADGSVTVQRGQTLSQI
                     ASAVARGNQVSRDRAMIALLRANPEAFIRGNVNLLKQGAVLRMPGSDALAAVDAAEAA
                     ALVREHAAQWRQARTVPQPAGTAAAVAKAQATNAASPSGASGARLEIAPALASDAAKA
                     GTTTGTAAGSEGDMMGNEQLRQAREDIATRDAEIGELKQRVADLEKLKEQQQSLIAMK
                     DNDLAAAQQRLAQAPGSRDAATPWYWLGLPVLLLAAAAAWLLRRRKPSPLPPLREEGD
                     AAGLAAAVPAGAALDTLAEQSSWSSVVSDSGRQEPAMPAWATATEVQDDVAAEPIADV
                     AAQADWQAQTLRDDEVGELPEAVTDLPRWDEPVPTQDTPVPDEPVAQAVADEIAVPDY
                     ALHAEQQPQFRGVFDLPAEHHDNGDSSGAPHDAMATAAHEEHTAAPAGDAGWAPRAGQ
                     ERLELAIAYLDLGDAQTARTLLQEVAEGGDLHSQAQARELLARLP"
     gene            7929..8291
                     /locus_tag="QEL58_002542"
     CDS             7929..8291
                     /locus_tag="QEL58_002542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005417973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HDS1676998.1"
                     /translation="MSRERRIDYVEFASADPAASRAFFEKVFGWSFVDYGGDYTAFDD
                     GRLQGGFFRGQPQRASDTGAPLLVLYADRLAPIEAAVRDAGGEIVRPVFSFPGGSRFQ
                     FVEPGGNELAVWSERDPA"
     gene            8324..9094
                     /gene="truA"
                     /locus_tag="QEL58_002543"
     CDS             8324..9094
                     /gene="truA"
                     /locus_tag="QEL58_002543"
                     /EC_number="5.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005417971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(38-40) synthase TruA"
                     /protein_id="HDS1676999.1"
                     /translation="MRYALGVEYDGSDFRGWQNLGEGGPSVQASLELALSSVADAPLQ
                     VVCAGRTDAGVHGQCQVVHFDTEVVRDPRAWMLGTTTRLPRSIAVRWCVPVADDFHAR
                     FSARARRYRYRLLNREVRPALGRQTLSWERRALDETLMHAAGQALLGENDFSAFRSVQ
                     CQALHARRELQSLQVSRQGEVIEVAVQGNAFLHHMVRNIVGSLILVGSGEKPVEWIAE
                     LLAGRDRTVAGPTAPPQGLVFLGPLYPDNWHLPAEVTL"
     gene            9091..9747
                     /locus_tag="QEL58_002544"
     CDS             9091..9747
                     /locus_tag="QEL58_002544"
                     /EC_number="5.3.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006381350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylanthranilate isomerase"
                     /protein_id="HDS1677000.1"
                     /translation="MSRSYYRTRIKFCGMTRAGDVRLAGELGVDAVGFIFARESSRRV
                     APAEARAMRQAIAPMVDVVALFRNNSKEEVREVLRTVRPTLLQFHGEEDESFCRSFNM
                     PYLKAIAMGGREEVNARTLQLRYPSAAGFLFDSHAPGGGGGTGVAFDWGRIPTGLHRP
                     FLLAGGLNPENVKDAILATLPWGVDVSSGIEVEPGIKDGYKMRTFVEEVRSADCTVLE
                     "
     gene            9935..10606
                     /locus_tag="QEL58_002545"
     CDS             9935..10606
                     /locus_tag="QEL58_002545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1449 family protein"
                     /protein_id="HDS1677001.1"
                     /translation="MQEFLTVVFGYPTLPYSVLLAVSLVYWGLAAFGLVDDGFGDLGA
                     DGALDSDTDLSGLSALLQRFGLGGVPVMVVVTLLGFFGWALTYFIHLFVLLPLPDLLR
                     WGFGTLVAVLAPLPAVPITALLLLPIRTFLQRLQPVAQASLLGRVGVVASPRVDARSG
                     HATVDDGGAGLVLQVRSDVELQRGERIVLVEHVAEHHYYRVVRADAVALDFQDNLLPG
                     NKENL"
     gene            10606..12624
                     /locus_tag="QEL58_002546"
     CDS             10606..12624
                     /locus_tag="QEL58_002546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005417967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677002.1"
                     /translation="MSFAGAAPFLIGIIVLVGLLLGLAGLFKAFYRKVDQGVALIVND
                     MSATPKVHFTGALIIPVLYRAELMRISLITLQIDRRGKEGLICRDNMRADIAVAFYLR
                     VNETQADVLRVAKAIGADRASDKHAVDELFNAKFSEALKTVGKKFDFTELFEKRQEFR
                     DEIIAVIGNDLNGYVLEDVAIDYLEQTPKSLLDQFNILDAQGIRKITELTAAQNVVTN
                     ELEQNEKLAITKKNVEAREALLALERQQAEAEARQKREIETIRAREEAETAKVQEEQR
                     QLSENARIEAQQLIDIRDQNRLREVEVAEQNRQRAVAIEAERVERARQLEQVTTDREV
                     QLQGVERDKVVEQGKMDVANITRERISIDKTVAQEEERIKEVREVSEADRQKQVLILE
                     AEAKAQESLVREVKEAQARETASKHRAVELTTLAQAEHEAAGKQAEAKRLLADAFRAE
                     QAAPGLAEAQVREASALAIEKVGIAEARVIEAKAEANLKQGSNEARVLAETLQAQAQG
                     EEKMGLARATATESLGNAEAGVVQKKLLAEAEGLVRKFEAIASLSDQARGHEEFRMML
                     DNSLKQALASIEAGKEVSRENANVIASALRNADIDLVGGDGGMFENLVKAVSLGKSIE
                     GFAGKSPIVQELMQRYLGVAVAEPAPRQIAEDADAAPTVSAAVVDSAR"
BASE COUNT         2091 a         4238 c         4374 g         1926 t
ORIGIN      
        1 gcagcgtggc cagcgcctgg cccagctgca ccgggctctc ggcgcccagc tgcggggcga
       61 actcggccac gccgggcggc agcagcacga tcacggtcga gccatagttg aagcgcgcca
      121 tctcggcgaa tcgctccagc tggatgccct ggccacggta gtccttgcgg gtgatgcggt
      181 cgccgtaggc cgggatctct tcgccgctcc acacggtttc cacgccggac accagcagtg
      241 cgccgaccat cacgctgacc atcgggccga agctggtgtc gaagtggcag accaggcgct
      301 cgttgcgcgc gaacaggcgt ggcacgccgt tcaccgcggc cgggccgacg ctgaacagac
      361 ggcccggcac gtgcacggtt tcacgcaggg taccggtcca gggcatgtgc acgcggtggt
      421 agtcgcgcgg cgacaggtag acggtggcat acaggccgtc gttgtacggc ttggcatcct
      481 cgtcgctgcc cagcagctcg gccgcggtga acgactggcc cttggcctgg aagatgcgac
      541 cggcctcgat ctttcccagc tggctgatgc ggccgtcggc cggcatcacc aggctgcgcg
      601 gatcggcatc ggccacccgc gcgcccggct tcagcgcacg ggtgaagaac tggttgaagg
      661 tggcatagct gcgcgggtcc gggttggccg cctcatccag gttgacgttg aacttgcggg
      721 tgaccgtgtc gatcagccag cgtgacacgc gcgggtcgtc cgagtacgcc agcgaacgcg
      781 ccatcgagga cagcagacgg tggggcagga cgtacgtcag ggcggtggtg agactcatgg
      841 ggcggttttc tcggtcagct tctgcaggtc gcgggcgatc gccggcgcgt tgaacggggg
      901 gcgcaccagg ccagcgaggc gcccctgcgg gtcgagcacg gccaggctgg ccgaatgctc
      961 gacggtgtaa tcctcggggt tctcgtcgaa gtgcttgccc ggcaccttct ggaacacgaa
     1021 gcccagcgag gtggcgaagc gctccagcga gggaacgtcg gcggtggcgg ccagggtgtc
     1081 cttgtggaag ccgtgcacgt attcgcccag gcgggtggcg ctgtcgcggt cggggtcgac
     1141 cgagatgaac agcacgcgcg ggcgcaggct gtcgggcagg gcctcccact ggttctgcgc
     1201 gccggccagc tcggccaggg tggtcgggca cacgtccggg cagaacgtga agcccaggaa
     1261 caccagggtc cagtggccct tcagttcgcc gggaatgagc cgggtgccgt cggattgggc
     1321 caggttgaag tcaggcagtt cccgggtatg cggatacagg gtgatcgctt cggtagccgg
     1381 ggcgttggcc ggcggcttcg gcgcgaacac ctgctgcgcg gccagcaggc cgagccccgc
     1441 cgccagggcg atcagcagga tgatgccggc gttgcgattg aacatggggg ctcccgcgcg
     1501 aaatgggttc catcataccg gctgtggccc gatcgtttcc gccgcaacgg atgccgccac
     1561 gggcgccagc ccctataatc gggggccact ttgcccgcag taccgctatg accgctgaaa
     1621 cggccgccga actccacacg atcatcgatc tgatccgcta cggcaccagc cgtttcaacg
     1681 aagccgggct gaccttcggg cacagctacg acaacgcgct ggacgaggcc acccagctgg
     1741 tgctgcacag cctgcacctg ccgcacgacc tcggcccggc gtacggccag gcgcggctgc
     1801 tgcaggccga gaagcaacgc gtgctggagt tgttccagcg ccgcatcgac gaacgcatcc
     1861 cggccgccta cctgacaggt gaagcctggt ttgcgggttt gagcttcaag agcgacaagc
     1921 gcgcgctggt gccgcgctcg ccgatcgccg aactgatcga gtgcggcttc gagccgtggc
     1981 tggccggccg cgacgtgtac cgtgcgctgg acctgtgcac cggttcgggc tgcatcgcca
     2041 tcgccatggg ccactactac ccgaactggc aggtggacgg cgtcgacctg agcgacgacg
     2101 cgctgtcgct ggctgaagaa aaccgggagc ggctgcaggc atacaacgtc aacctggtga
     2161 agtcggacct gttcaatggc ctgtccggcc gccactacga cctgatcgtc accaatccgc
     2221 cgtacgtcac caacgacgag accgatgcgc tgccgaagga atactcctac gagccggaca
     2281 tgggcctgcg tgccggcgac gacggcctgg acctggtgct gaagatcctg cgtgacgcgc
     2341 cgctgcacct gagcgaagac ggcctgctga tctgtgaagt gggcgagtcc gaacagcatc
     2401 tgatcaagct gctgccggaa gtcgatttcg cctggatcga attcaaggtc ggccagatgg
     2461 gcatcttcgc ggtcgaatgc cgcgagctga tcgcccacag cgcgcgcatc accgaactgg
     2521 cggcgcagcg cccgtgagtt ccaattcgtt cggcaaactg ttcaccgtca ccacgttcgg
     2581 cgagtcgcac gggccggcca tcggctgcgt gatcgatggc tgcccgccgg ggctggcgct
     2641 ggacgcggcc gaattcgccc acgacctgca gcgccgcgcc accggcaaga gccggcacac
     2701 ctcggcgcgc cgcgaggccg atgaggtcga gatcctgtcc ggcgtgtacg aaggcctgac
     2761 caccggcacc ccgatcgcgc tgctgatccg caacaccgac cagcgcagca aggattacgc
     2821 caacatcggc cagcagttcc gcccgggcca tgccgactac agctactggc acaagtacgg
     2881 catccgcgac ccgcgtggtg gtggccgttc ctcggcgcgc gagaccacca tgcgtgtggc
     2941 cgccggcgtg gtcgccaaaa agtggctggc cgagcgtttc ggcgtcaccg tgcgtggcta
     3001 cctgtcgcag ctgggcgaca tcaccccggc cggcttcgac tggtcggcgg tggaagacaa
     3061 cccgttcttc tggccgcacg ccgcgcaggt gcccgagctg gaggcgtaca tggatgcgct
     3121 gcgcaagtcc ggtgattcgg tcggtgcctg cgtggacgtg gtcgccgaca acgtgccgcc
     3181 gggttggggc gagcccatct acggcaagct cgacggcgaa ctcgccgccg cgctgatgag
     3241 catcaacgcg gtgaagggcg tggagatcgg cgacggtttc gccagcgccg cgcagaaggg
     3301 caccgagcat cgtgacctgc tgaccccgca gggctttgcc agcaaccatg ccggcggcat
     3361 cctcggcggt atttccaccg gccagccggt ggtcgcttcg atcgtgttga agccgacctc
     3421 cagcctgcgc ctgccgggcc cgtcgctgga caccgccggc aacgtggtgg aagtggtcac
     3481 caccggccgc cacgatccct gcgtcggcat ccgtgccacc ccgatcgccg aggcgatggt
     3541 ggcgatggtg ctgatggacc aggcgctgcg ccatcgtgcg cagtgtggcg atgtcggcac
     3601 gatcaccccg cgtatccccg ggcagatcga tggctgacac gcggccgacg gtgtgggtga
     3661 gccagccgct gatcgatgcg gccatcgcgc cgctgcgcga tcgcgtgcag ctgcgcgtca
     3721 ccgacaccgt taccgcctgg tcgccgcagc agatcgccga gcggctggcc tcagtcgacg
     3781 gcgcgatcat caccctcaac gagcgcatcg gcgcggccca ggtggccgat gccgcacagt
     3841 tgcaggtgat cgccaacgtc ggcgtcggct acaacaacct ggatgtcgac gcgctcagcg
     3901 cggccggcat cctcgccagc aacaccccgg acgtgctcac cgagaccacg gccgacctcg
     3961 gtttcgccct gctgatggcc accgcgcgcc gcatcaccga atccgagcgc tggctgcgtg
     4021 aaggccagtg gcagcagtgg tcgttccaga ccatgctcgg tgccgacatc cacggcagca
     4081 cgctcggcat tctcggcatg ggccgcatcg gccagggcat cgcccgccgc ggcgcactcg
     4141 gtttcggcat gaaggtgctc taccacaacc gctcgcagct gccggccgac accgaagcgg
     4201 cgctgggtgc cacctacgtg gacctggata cgctgcttgc gcagtccgac cacctgctgc
     4261 tggtgctgcc gtacaccccg gcgtcgcatc acctgatcga tgccgccgcg ctggcgaaga
     4321 tgaagccgtc ggccacgctg gtgaacatcg cccgtggcgg cctggtcgat gagatcgcat
     4381 tggccgatgc actggccaat ggccgcctgg cggcggccgg cctggatgtg tacgagggcg
     4441 agccggcagt gcgcccggaa ctgctggcgc tgcgcaacgt ggtgctgacc ccgcacatcg
     4501 gcagcgcctc gctggccacg cgaacggcga tggtacagct ggccgtggat aatctggttg
     4561 ccgggctcgg cctggacggc gatccgtcgc gcatgccgag cgcgatcaac gctgacgcgg
     4621 cgatggccgc gcgcgtgact ctgggcaaaa aaaccgggaa acgataggga acctccgcgc
     4681 gccccgcttg aggaggttcc ccgaaccctg ctgtcgtgcg tgatttttcc catccccgtt
     4741 ttcgtgagag tttcccccca tgagcaatgc acagcgcagt ttccacgtcg ccgtcgtcgg
     4801 tgccaccggc gcggttggcg agaccatgtt gtcgatcctt gaagaacgtc atttcccggt
     4861 tggtaccctg agcgtcctgg cctccgagcg ttcggccggt ggcgagatcg agttcaacgg
     4921 ccagaaggtc acagtgcagg acctggccac tttcgacccg accggcgtcg agatcgccct
     4981 gttctcggcc ggtggcagcg tgtcgaagga atacgcgccg aagttcgctg ccgccggtgc
     5041 ggtggtgatc gacaactctt cggccttccg ttacgacgac gacgtgccgc tggtggtatc
     5101 cgaggtcaac ccggaacagg ttgccaaccg tccgcgcggc atcatcgcca atccgaactg
     5161 ctcgaccatg cagatgctgg tggcgctggc gccgctgcac cgcaagtacg gcatcgagcg
     5221 catcaacgtc tccacctacc agtcggtatc cggcggcggc cgttcggcca ccgaggagct
     5281 gggcaagcag accggccagc tgctcagctt ccaggagatc gatccgcagc gcttcccggt
     5341 gcagatcgcc ttcaacctga tcccgcacat cgacgacttc caggacaacg gcttcaccaa
     5401 ggaagagatg aagctgatct gggagacccg caagatcctc ggcgacgaca gcatcctggt
     5461 gaacccgacc gcggtgcgcg tgccggtgtt ctacgggcat tccgagtcgg tggcgatcga
     5521 gacccgcgac aaggtcaccg tggccgaagc gcgtgcgctg ctggagcagt cgccgggcat
     5581 cgaagtggtg gatcgccacg aagcgggtgg ctacccgacc ccggtgaccc acgcttcggg
     5641 caccgacgcg gtgtatgtcg ggcgcatccg tgaggacctg tcgcacccgc gcggcctgaa
     5701 cctgtggatc gtctcggaca acgtgcgcaa gggcgcggca ctgaatgccg tgcagctggc
     5761 agagctggtc gccgccgaac agcgctgagc agcgcggttg cttcaccggt agtgccggcc
     5821 gctggccggc attgccgcgg gtcgtccatc ggtgggtgcg gaccttggtc cgcacgcttt
     5881 atagtgtcgc ccatgaataa acgggccagg ggcgcaacgc gcccgctcag ctacctttcc
     5941 gccgcgctgc tggccttggc cagcagttcg gcgctcgccc tggggttggg cgacatccgt
     6001 gtcctgtcca agccgggcca gcccttgctg gccgagatcc cggtagtctc ggccgacccg
     6061 tccgagctgg aaaacctgcg ggtggcgctg gcttcgccgg tcaccttcga gcgcgtcggc
     6121 ctgcaacggc cgaccggcct ggtcagcgaa ctgcagttcg aactgacccg caacgcgcag
     6181 ggcagggcgg tggtgcgggt gacctcgcag gcgccggtcg agacgccgtc gctgagcttc
     6241 ctgatcgagg ccgactgggg ccagggccgg ctggtccgcg aatactcggc gctggtcgat
     6301 gcgccgtcca gcgcactggc cgtggccgag ccggagatcg tcgcaccggc tggcaccctg
     6361 tccaatacca ttgcccgcga gccggcagcg gcacctgtgg cagaggcgcc gggcacgcca
     6421 ccgtccgcgc cggcgcccac gccggcaccc gcaccagcac ggtcgcgtgc ggtgcctcca
     6481 ccggttgcgg ccatacctgc cgatggcagc gtcaccgtgc agcgcggcca gaccttgtcg
     6541 cagattgcca gcgcggtggc gcgtggcaac caggtcagtc gtgatcgcgc gatgatcgcc
     6601 ctgctgcgcg ccaatcccga agccttcatc cgtggcaacg tgaacctgct caagcagggc
     6661 gcagtgctgc gcatgccagg cagcgatgcg ctggcggcgg tcgatgctgc cgaagcggct
     6721 gcgctggtgc gcgaacacgc ggcccaatgg cgccaggcac gcaccgtgcc gcagccggcg
     6781 ggtaccgccg cagcagtggc caaggcacaa gccacgaacg cagcgtcccc gtcgggggcc
     6841 agcggcgcgc ggcttgaaat cgctccggcg ctggcgtccg acgccgcgaa agcgggcaca
     6901 accaccggca ccgctgccgg cagcgagggt gacatgatgg gcaacgagca actgcgccag
     6961 gcgcgtgagg acatcgctac ccgcgatgcc gagatcggcg agctgaagca gcgcgtggcc
     7021 gacctggaga agctgaagga acagcagcag tcgctgatcg cgatgaagga caacgacctg
     7081 gctgccgcgc agcaacgtct ggcccaggcg ccgggcagcc gcgacgcggc aacaccgtgg
     7141 tactggctgg gcctgcccgt gctgctgctc gccgcggcgg cagcctggct gctgcgccgg
     7201 cgcaagccgt caccgttgcc gccgctgcgc gaagaaggcg atgcggctgg cctggccgcg
     7261 gcggtgccgg cgggtgcggc gctggatacg ctggccgagc agtcctcgtg gtcgtcggtg
     7321 gtgtccgaca gtggccgcca ggagcccgcg atgccggcct gggcgaccgc aaccgaggtg
     7381 caggatgacg tggctgccga accgatcgcc gacgtcgccg cccaggctga ctggcaggcg
     7441 cagacgctgc gcgatgacga agtgggggag ctgcccgagg ccgtgaccga tctgccgcgc
     7501 tgggacgagc cggtgcccac gcaggacacc cccgtgccgg atgagccggt cgcgcaggcg
     7561 gtcgctgacg agatcgcggt gccggactat gcgctgcacg ccgaacagca gccgcagttc
     7621 cgcggcgtgt tcgacctgcc ggccgagcac catgacaacg gcgattccag cggtgcgcca
     7681 cacgacgcga tggccacggc cgcgcacgaa gaacacaccg cggcaccggc cggtgatgcc
     7741 ggctgggcac cgcgtgccgg ccaggagcgg ctggagctgg ccattgccta tctggacctg
     7801 ggcgacgcgc agaccgcgcg taccctgctg caggaagtcg ccgagggcgg cgatctgcac
     7861 agccaggcgc aggcgcgcga gctgttggcg cgcctgccgt gaccgaaccc gctgacaagg
     7921 accgtgccat gagccgcgag cgccgcatcg attacgttga attcgcctcc gctgatccgg
     7981 cggccagccg cgccttcttc gagaaggtgt tcggctggtc gttcgtcgac tatggcggcg
     8041 actacaccgc cttcgacgat ggccgcctgc agggcggctt cttccgtggc cagccgcagc
     8101 gcgccagcga taccggcgca ccgctgctgg tgctgtacgc cgaccgcctg gcgccgatcg
     8161 aggcagcggt gcgtgacgcc ggcggcgaga tcgtgcgccc ggtgttttcc ttccccgggg
     8221 gcagccgctt ccagttcgtc gagcccggtg gcaacgaact ggcggtgtgg tccgaacgcg
     8281 acccggcctg agcgccgccc cacacgcagc atcgaggtag cacatgcgtt acgcgcttgg
     8341 cgtcgagtac gacggcagcg atttcagggg ctggcagaac ctgggcgaag gtggccccag
     8401 cgtgcaggcc agccttgaac tggccctgtc gtcggtcgcc gatgcgccgt tgcaggtggt
     8461 ctgcgccggc cgcaccgatg ctggcgtgca cggccagtgc caggtcgtgc atttcgacac
     8521 cgaggtggtg cgcgatccgc gcgcctggat gctcggcacc accacccgcc tgccgcgctc
     8581 gatcgcggtg cgctggtgcg tgccggtggc cgatgatttc cacgcccgtt tttccgcgcg
     8641 cgcgcgccgc taccgctatc ggctgctcaa ccgcgaagtg cggccggcgc tgggccgcca
     8701 gaccctgagc tgggagcggc gggcgctgga cgagaccctg atgcatgccg ccggccaggc
     8761 cctgcttggc gagaacgact tcagtgcgtt ccgatcggtg cagtgccagg cgttgcatgc
     8821 gcggcgtgaa ctgcagtcgc tgcaggtcag ccgccagggc gaggtgattg aagtggccgt
     8881 gcagggcaat gcattccttc atcacatggt ccgcaatatc gtcggatcct tgatcctggt
     8941 gggcagcggc gaaaaaccgg tggaatggat cgccgaactg ctggcagggc gcgatcgcac
     9001 cgtagccggt cccaccgcac cgccgcaggg cctggtgttc cttgggcccc tgtaccccga
     9061 caactggcat ctgcccgccg aggtcacgct atgagccgct cctactaccg cacacgcatc
     9121 aagttctgtg gcatgacccg ggccggcgac gtccgcctgg ccggtgagct gggcgtggac
     9181 gcagtgggtt tcatctttgc ccgcgagagc agccgtcggg ttgctccggc cgaggcgcgc
     9241 gcgatgcgcc aggcgatcgc gccgatggtc gacgtggtgg cgctgttccg caacaacagc
     9301 aaggaagagg tgcgcgaggt gctgcgcacg gtgcggccga ccctgctgca gttccatgga
     9361 gaggaagacg agagcttctg ccgcagtttc aacatgccgt acctgaaggc gatcgccatg
     9421 ggcgggcgcg aagaggtcaa cgcccgtacc ctgcagctgc gctaccccag cgcggcggga
     9481 ttcctgttcg acagccacgc gcccggcggc ggtggcggca cgggtgtcgc cttcgactgg
     9541 gggcgcatcc cgaccggcct gcaccgcccg ttcctgctgg ccggcggcct gaacccggag
     9601 aacgtgaagg acgccatcct cgccaccctg ccgtggggcg ttgacgtgtc cagcggcatc
     9661 gaggtcgagc cgggcatcaa ggacggctac aagatgcgca cgttcgtcga agaggtgcgc
     9721 agcgccgact gcaccgtgct ggagtgaccc ggcacgaccc cgcgcgcgtc gccgcctgcg
     9781 gtcggcgcgc gtcttcacat ttgtccctgt acaccctctt cacataggat gaaggggaag
     9841 ccatggccat gagggccgtg gcgggatcga cggaaccgct cccggcggat tccgaacggg
     9901 gcgtcacgcg cccatagccc aggaaggcaa agcgatgcag gaattcctca ccgtcgtgtt
     9961 cggctacccg accctgccgt acagcgtcct gctggcggtg tcgctggtct attgggggct
    10021 tgccgctttt ggcctggtcg atgacgggtt cggcgatctc ggcgccgatg gtgcgctgga
    10081 cagtgacacc gatctcagcg gcctctcggc cctgctgcag cgcttcggcc tcggtggcgt
    10141 gccggtcatg gtcgtggtca ccctgctggg cttcttcggc tgggccttga cctatttcat
    10201 ccatctgttc gtactgttgc cgctgccgga cctgctgcgc tggggtttcg gcacgctcgt
    10261 ggccgtgctc gcgccgctgc cggcggtgcc gatcaccgcg ctgctgctgc tgcccatccg
    10321 caccttcctg cagcgcctgc agccggtcgc acaggcctcc ctgctggggc gcgtgggcgt
    10381 ggtcgcctcg ccccgggtgg atgcgcgcag cggccatgcc acggtcgatg acggcggtgc
    10441 cgggctggtg ctgcaggtgc gcagcgacgt cgaactgcag cgtggcgagc gcatcgtgct
    10501 ggtcgagcac gtggccgaac accattacta ccgggtggtc cgcgctgatg cggtcgccct
    10561 cgatttccag gacaacctgc ttccgggcaa caaggagaat ctctgatgag ttttgctggc
    10621 gcggccccct tcctgatcgg gatcatcgtc ctcgtaggcc tgctgctcgg cctggcggga
    10681 ctgttcaagg cgttctaccg caaggtcgac cagggcgtgg ccctgatcgt caacgacatg
    10741 agcgccacgc ccaaggtgca cttcaccggt gcgctgatca tcccggtgct gtaccgcgcc
    10801 gagctgatgc ggatcagcct gatcaccctg cagatcgacc gccgcggcaa ggaaggcctg
    10861 atctgccgcg acaacatgcg cgccgacatc gccgtggcgt tctacctgcg ggtcaacgag
    10921 acccaggccg acgtgctgcg tgtggccaag gccatcggtg ccgaccgtgc ctcggacaag
    10981 cacgccgtcg atgagctgtt caacgccaag ttctccgaag cgctgaagac ggtcggcaag
    11041 aagttcgact tcaccgagct gttcgagaag cgccaggaat tccgcgacga gatcatcgcg
    11101 gtcatcggca acgacctgaa cggctatgtg ctggaagacg tggccatcga ctacctggag
    11161 cagaccccga aatcgctgct ggaccagttc aacatcctcg acgcgcaggg tatccgcaag
    11221 atcaccgagc tgaccgccgc gcagaacgtg gtgaccaacg agctggagca gaacgagaag
    11281 ctcgccatca ccaaaaagaa cgtggaagcg cgcgaagcgc tgctggccct ggaacgccag
    11341 caggccgagg ccgaggcgcg gcagaagcgc gagatcgaga ccatccgtgc ccgcgaggaa
    11401 gccgagaccg ccaaggtgca ggaagaacag cgccagctgt ccgagaacgc acgcatcgaa
    11461 gcgcagcagt tgatcgatat ccgtgaccag aaccgcctgc gcgaggtgga agtggccgaa
    11521 cagaaccgcc agcgtgcggt ggccatcgaa gccgagcgcg tggagcgcgc gcgccagctg
    11581 gaacaggtca ccaccgaccg cgaagtgcag ctgcagggcg tggagcgtga caaggtggtc
    11641 gagcagggca agatggacgt ggccaacatc acccgcgaac gcatctccat cgacaagacc
    11701 gtggcccagg aagaagagcg catcaaggaa gtgcgcgagg tctccgaggc cgaccgccag
    11761 aagcaggtgc tgattctgga agccgaagcc aaggcgcagg aatcgctggt gcgcgaagtg
    11821 aaggaagcgc aggcccgcga aaccgcctcc aagcaccgcg cggtggaact gaccaccctg
    11881 gcccaggccg aacacgaagc ggccggcaag caggccgaag ccaagcgcct gctggccgac
    11941 gccttccgtg ccgagcaggc ggcgccgggc ctggccgaag cgcaggtgcg tgaagcctcc
    12001 gcactggcca tcgagaaggt cggtatcgcc gaagcccgcg tgatcgaagc caaggccgaa
    12061 gccaacctga agcagggcag caacgaggcc cgcgtgctgg ccgaaaccct gcaggcgcag
    12121 gcccagggcg aagagaagat gggcctggcc cgtgccaccg ccaccgaatc gctgggcaac
    12181 gccgaagccg gtgtggtgca gaagaagctg ctggccgaag ccgaaggcct ggtgcgcaag
    12241 ttcgaagcca tcgcctcgct gagcgaccag gcacgtggcc acgaagagtt ccgcatgatg
    12301 ctggacaaca gcctgaagca ggcactggcc tctatcgaag cgggcaagga agtctcgcgc
    12361 gagaacgcca acgtcatcgc cagcgcgctg cgcaatgccg acatcgacct ggtcggtggc
    12421 gacggcggca tgttcgagaa cctggtcaag gccgtgtcgc tgggcaagtc gatcgaaggc
    12481 ttcgccggca agagcccgat cgtgcaggag ctgatgcagc gctacctggg cgtggccgtg
    12541 gccgaaccgg caccgcggca gatcgccgag gacgccgacg cggcgccgac cgtgtcggcc
    12601 gccgtggtcg acagcgcccg ttgatgcac
//
LOCUS       DAOKIP010000111        12593 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.111,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000111 DAOKIP010000000
VERSION     DAOKIP010000111.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 12593)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12593)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12593
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.111"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            <1..716
                     /locus_tag="QEL58_002547"
     CDS             <1..716
                     /locus_tag="QEL58_002547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004137112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677003.1"
                     /translation="GGPVRMALVDRDRGTELRSYPAEGQRWVAGERGHRYAVRLYNDS
                     PRRVLVVLSVDGINAISGEDADPSQTGYVLNPGQRADITGWRKSQDEVAQFVFSSPSG
                     SYASRTGRPDNIGVVGVAVFEEARRWRPEPILRRGLPAPAPAAEAAADASASRIEGYA
                     SKSQAPALGTGHGAREQSSVRDTDFERASRSPAQVLQLRYDSARNLRARGILVDSPSR
                     LPREPQAFPNRYVPDPPAR"
     gene            complement(803..1024)
                     /locus_tag="QEL58_002548"
     CDS             complement(803..1024)
                     /locus_tag="QEL58_002548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CsbD family protein"
                     /protein_id="HDS1677004.1"
                     /translation="MNKDIISGKWSQLKGKAQAKWGDLTNDDFDVAEGNAEYLAGRLQ
                     ERYGWAKDRAEKEVREFQDSVSKDYPDYK"
     gene            complement(1230..1367)
                     /locus_tag="QEL58_002549"
     CDS             complement(1230..1367)
                     /locus_tag="QEL58_002549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="entericidin A/B family lipoprotein"
                     /protein_id="HDS1677005.1"
                     /translation="MKRVVALMLLSMFSVALLAGCNTIAGAGKDVQKAGEKVEDTAKG
                     R"
     gene            complement(1530..2450)
                     /gene="rocF"
                     /locus_tag="QEL58_002550"
     CDS             complement(1530..2450)
                     /gene="rocF"
                     /locus_tag="QEL58_002550"
                     /EC_number="3.5.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginase"
                     /protein_id="HDS1677006.1"
                     /translation="MAHPISVSLIGVPTDVGAGHRGARLGPEALRVAGLPEALEARGV
                     DVRDLGNLDGPRNPWTAPVEGYRHLDEVVAWNHALMEASYAELQAGRMPIMLGGDHCL
                     GIGSITAVARWCREQGKTLRVLWLDAHSDFNTSDVTPSGNIHGMPVACLCGLGPDALT
                     RLGGTSPAITPAQMHQIGIRSVDPEEKRLIKTHKVDVYDMRYIDENGMKRAVEAALAG
                     IDENTHLHVSFDVDFLDPSIAPGVGTTVPGGVNYREAQLVMEMIADTGRMGSLDIVEL
                     NPLLDKQNATAELAVDMVESLFGKSTLMRD"
     gene            2581..2928
                     /locus_tag="QEL58_002551"
     CDS             2581..2928
                     /locus_tag="QEL58_002551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677007.1"
                     /translation="MSPFINTAWPRFFMAALPIAVFAVLLSNSIDASPNGWLMQATLL
                     LTPFSFLLFLGLGWQRLRKAHAEYPILKSELHRMLAALIGNVKVAALWFGLTVVGMFA
                     LMLAWVLLYRPGG"
     gene            complement(2950..3720)
                     /locus_tag="QEL58_002552"
     CDS             complement(2950..3720)
                     /locus_tag="QEL58_002552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005411960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3011 domain-containing protein"
                     /protein_id="HDS1677008.1"
                     /translation="MRRHALPLTAALLSTAFAAPAVAAVPFFNASCPGGIDVHADEGG
                     PVYVQGRETALKRFNDRYFEARDANSGITLSISRNDDGSPQVSYTGRGGANGICQVST
                     TGTPASAANGAGPRDAAAGDAALPREVTCESTGQQQVSCDLNTRGNVEIVRQLSRTRC
                     EEGKNWGLARHLVWVNGGCRAVFRNVSTVATPAPAGDTALGACNARKGAQGALVTQMP
                     VGSDYQELIIDYPDGRFLCMMRNNGQVQSVTPVRRRGR"
     gene            3926..4114
                     /locus_tag="QEL58_002553"
     CDS             3926..4114
                     /locus_tag="QEL58_002553"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677009.1"
                     /translation="MTALRDMSFSALQRLKQANRDNSFFLSDHPMPSEKTTGTRAFCV
                     RMMNRHLQRWSGLPSPFD"
     gene            4305..4712
                     /locus_tag="QEL58_002554"
     CDS             4305..4712
                     /locus_tag="QEL58_002554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005407705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677010.1"
                     /translation="MSKTLYPYLTATLGDAALHLPLELAQPLEAAFAAASDAPAPINL
                     PACLRRIQAGDAADGQPWQGPSSTPGHAVAAARRDRAATGLVSLLELYHANERVRVDG
                     DEKDDIGDGVREGLMLACRGLAEYVALQAGEAR"
     gene            4793..5116
                     /locus_tag="QEL58_002555"
     CDS             4793..5116
                     /locus_tag="QEL58_002555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010486982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677011.1"
                     /translation="MSTPFPNTRPVLVELQLDELDSRGGVVAEMIASTAPVMALSISP
                     ERMWYGFVLNDRAITRIRPGTRTNCTISFIDYDGAKEAFPCGTTAAFGDGLSTQGLIR
                     IIRFD"
     gene            complement(5351..5653)
                     /locus_tag="QEL58_002556"
     CDS             complement(5351..5653)
                     /locus_tag="QEL58_002556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005407703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative addiction module antidote protein"
                     /protein_id="HDS1677012.1"
                     /translation="MATKKKVELKAFDVAEHLRTPEEMAAYLDACIEESDGDSAFIAK
                     ALGDIARAQGMSKVARAAGLSRESLYRALSGERSPDFATILKVTRALGMRLHASAA"
     gene            complement(5712..5852)
                     /locus_tag="QEL58_002557"
     CDS             complement(5712..5852)
                     /locus_tag="QEL58_002557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007080985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="addiction module killer protein"
                     /protein_id="HDS1677013.1"
                     /translation="MRIDAGPGYRVYYTQRGRQLLIFLVGGDKSSQQRDIEKVREIAR
                     AL"
     gene            complement(5912..7273)
                     /locus_tag="QEL58_002558"
     CDS             complement(5912..7273)
                     /locus_tag="QEL58_002558"
                     /inference="COORDINATES: protein motif:HMM:NF037255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4935 domain-containing protein"
                     /protein_id="HDS1677014.1"
                     /translation="MKTQFAGYFDPTEDEIADLWKYAVIALDTNVLLGLYRMPAGSRA
                     EIFEMLKGLATRLWVPYHVLVEFHRNRLEVLRQEYESSQQLAKDVQRAYQTFRAAVKS
                     EGNKERACWPQLEEKLDAIGQTAKELIKVAQTESEHYIAPNKKDAVLAFVEALLEGQF
                     GSRPSSQSVIDVAEAEAAERYAVKMGPGYLDTDKAGDIYMFDGLKYDRQYGDYMVWKE
                     LLKFASQPHIRHILLITSDIKPDWWLDSRSISGKRPQPELSMEMRRVGGVTGFWMYTL
                     SDFIKNAKVRLDAKITSKTISDVIHSESSSAKNVFASRTYQGADLEAALSIVSHKQLD
                     VDDLLASGFSTDAHGEDTPKIVVAATSALVSKERLANAIQEAIGTFNLFLKYRRIDVI
                     VLTRAIGIGPGVKSRSQALPIVADMVKGILPPELHWSVTLASFKSARTALSYHGRISS
                     SAF"
     gene            complement(8763..8838)
                     /locus_tag="QEL58_002559"
     tRNA            complement(8763..8838)
                     /locus_tag="QEL58_002559"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(8803..8805),aa:Thr,seq:tgt)
     gene            complement(8879..9733)
                     /locus_tag="QEL58_002560"
     CDS             complement(8879..9733)
                     /locus_tag="QEL58_002560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPOR domain-containing protein"
                     /protein_id="HDS1677015.1"
                     /translation="MLTRALIVVLAILNLGVACWWLLRDAPQAPAPPPQPAGVAELRW
                     VPGGADATAAAEATAAAPTAPLMEREPAEKTAVAATPAPAVPAKPELAKPQVAEAVPA
                     PAPVAVAAAVKPAPAPVAEKPATPPAAPEPPRCVALGPFADRAAATAAQGKAGNAISQ
                     VRLREQPAASGSARYRVLLPAAANREEAQATVKRIVAAGLSDYYIISQGEDINAVALG
                     QYRNREGAERRVAAVQAAGFQPRLVASGDAGQWWLEGQLAAGTQPAQAQQRSGAAQSR
                     SLECARLR"
     gene            complement(9743..10474)
                     /locus_tag="QEL58_002561"
     CDS             complement(9743..10474)
                     /locus_tag="QEL58_002561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012509777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III pantothenate kinase"
                     /protein_id="HDS1677016.1"
                     /translation="MSDWLFDLGNSRFKFAPLQGDRAGDVQAWAHGAEGMAGQPPHSL
                     PSGTTAFVASVAAPSLTSAMLDQLQRRFEHVHVVRTSAECAGVRIAYAKPEKFGVDRF
                     LALLAAAKAQRPVLVVGVGTALTIDLLDAEGQHHGGRISASPTTMREALHARAVQLPA
                     TGGDYSEFANDTADALASGCDGAAVALIERSAQQAHALLGVAPSLLVHGGGAPALMPL
                     LPGADYHPSLVLDGLARWAVHQPAG"
     gene            complement(10471..11439)
                     /gene="birA"
                     /locus_tag="QEL58_002562"
     CDS             complement(10471..11439)
                     /gene="birA"
                     /locus_tag="QEL58_002562"
                     /EC_number="6.3.4.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional biotin--[acetyl-CoA-carboxylase]
                     ligase/biotin operon repressor BirA"
                     /protein_id="HDS1677017.1"
                     /translation="MDDRQLLAKLAAGRLSGDALARELGQTRAAIWKRIQGLRAAGVG
                     VEGRAGEGYGLTRPVDLLDPDAIRVGLPAQVLPLLHHLQVAWTVDSTNAELLRCSAPQ
                     RGVSVLLAERQTGGRGRRGRTWASPLAAHVYLSVLRLYSGGLGRLAGLSLVAGIAVAE
                     ALHDLGFTQAQLKWPNDLIVDGRRKLVGLLAEGGGEYAGPARAVIGIGINTHMPPAFA
                     EQITQPWVDLDTLAGKPVDRNVVVAAVLTRLLPALEEFDREGLAPFLPRYAAFDMLAG
                     REVRVELEGQWQHGTALGLADDGALRVRIDGQERLLHAGEVSVRAA"
     gene            11584..11862
                     /locus_tag="QEL58_002563"
     CDS             11584..11862
                     /locus_tag="QEL58_002563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005407696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677018.1"
                     /translation="MRRYAHCLILLMMPFAASATAALDDSRGACVSSNGDAASQRAPT
                     ASASAASTKAAPVRPAASTTTGGGGSDDDMLPRIRAPKWHSYLPGMFR"
     gene            11829..>12593
                     /locus_tag="QEL58_002564"
     CDS             11829..>12593
                     /locus_tag="QEL58_002564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014035645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-dependent peptidase"
                     /protein_id="HDS1677019.1"
                     /translation="MAQLPAGNVPLIKSLLQWLRPAPRPIDDALWDNACRRAAWLHGL
                     DDARRARLRVLATRFLHEKTITPIGELQLQPGDGVLLAALCCLPLLEFGEVGLEGWSQ
                     LIVYPDAFRVHRSHMDAAGVLHEWDDELIGESWDSGPLILSWADVQADLAAPHEGYCV
                     AVHEMVHKLDALDGAMDGTPPLPRQWQREWAGIFQRAYDAFCAQVDAGEETLIDPYAA
                     EAPEEFFAVASEYHFSAPDLLQQALPEVAAQLRRFYG"
BASE COUNT         2183 a         4123 c         3959 g         2328 t
ORIGIN      
        1 agggcggccc ggtgcgcatg gccctggttg accgcgaccg cggcaccgaa ctgcgcagct
       61 accccgccga aggccagcgc tgggtggccg gcgagcgtgg ccatcgctac gccgtgcgcc
      121 tgtacaacga cagtccgcgc cgggtgctgg tggtgctgtc ggtggacggc atcaacgcca
      181 tttccggcga agatgccgat ccctcgcaga ccggctacgt gctcaacccc ggccaacgcg
      241 ccgacatcac cggctggcgc aagagccagg atgaagtggc gcagttcgtg ttcagcagcc
      301 ccagcggcag ctatgccagc cgcaccggcc gcccggacaa catcggcgtg gtcggcgtgg
      361 ccgtgttcga ggaagcacgt cgctggcgcc ccgagccgat cctgcgccgt ggcctgcctg
      421 caccggcccc ggcggccgaa gccgccgccg atgccagcgc cagccgcatc gagggttatg
      481 ccagcaagtc gcaggcgccg gcactgggca ccggccacgg cgcacgcgaa cagtcgtcgg
      541 tgcgcgacac cgacttcgaa cgcgccagcc gcagcccggc ccaggtgctg cagctgcgct
      601 acgacagcgc gcgcaacctg cgtgcacgcg gcatcctggt ggattcgccc tcgcgcctgc
      661 cgcgcgaacc gcaggccttc cccaaccgct acgtgccgga cccgccggca cgctgatcgc
      721 cgcctgcaga caacacaacg cccgcaacct cacggtgcgg gcgtcgtgtt gtgggggaaa
      781 cgtgtggggg aaaccgtggt gcttacttgt agtccgggta gtccttgctc acgctgtcct
      841 ggaactcacg gacttccttc tcagcgcggt ccttggccca gccataacgt tcctgcaggc
      901 ggcccgccag gtattcggca ttgccttcgg ccacatcgaa atcgtcgttg gtcagatcgc
      961 cccacttggc ctgggccttg cccttcagct gcgaccactt gccggaaatg atgtctttgt
     1021 tcattgctgg gagtccttgg ttgcaacggc gttcttaccg tggctccagc ttcgcgcagt
     1081 ggctgttgaa tgccggtcaa cccgcaatga aatacatgct cacctgcttg aatggttcac
     1141 tccgcttgca cagccgtgca gcagaaagca cgcacaaaaa aaggccggga aaaccccggc
     1201 cttttctctc tttccgttcc gcgcagggct caacggccct tcgcggtgtc ctcgaccttc
     1261 tcgcccgcct tctgcacgtc cttgccggca ccggcaatgg tgttgcaacc ggccagcagg
     1321 gccaccgaga acatcgacaa cagcatcagg gcaactacgc gcttcatggg cttctccttg
     1381 ggtttgccgc tacaccgctc aattcgcgga tgggattctt tcgctcggcg gaagaaggcc
     1441 aatgcccacc gccgccgcgt gaagtgcaat ctggcggcag acgcgtggag cgcgtgtgaa
     1501 cggatcacag atccgttcag cccaaaggct caatcgcgca tcagggtgga cttgccgaac
     1561 aggctttcga ccatgtccac ggccagttcc gcggtggcat tctgcttgtc caacaacggg
     1621 ttaagctcga cgatgtccag cgagcccatg cgcccggtgt cggcgatcat ctccatcacc
     1681 agttgcgcct cgcggtagtt caccccgccc ggcacggtgg tgcccacgcc cggcgcgatg
     1741 ctggggtcga ggaagtccac atcgaagctg acatgcaggt gggtgttctc gtcgatgccg
     1801 gccagcgccg cttccaccgc acgcttcatg ccgttctcgt cgatgtagcg catgtcatag
     1861 acatcgacct tgtgggtctt gatcaggcgc ttttcttccg ggtccaccga gcggatgccg
     1921 atctggtgca tctgcgccgg ggtgatcgcg ggcgacgtgc cgcccagccg ggtcagcgca
     1981 tccgggccga ggccgcacag gcaggccacc ggcatgccgt ggatgttgcc cgacggggtc
     2041 acatcgctgg tgttgaagtc cgaatgcgca tccagccaca gcacgcgcag ggtcttgccc
     2101 tgctcgcggc accagcgcgc cacggcggtg atcgaaccga tgcccaggca gtggtcgccg
     2161 ccgagcatga tcggcatgcg gccggcctgc agttcggcat agctggcttc catcaaggcg
     2221 tggttccacg ccaccacttc atccaggtga cggtagcctt ccaccggcgc ggtccacggg
     2281 ttgcgcgggc cgtccaggtt gcccaggtca cgcacgtcca cgccgcgcgc ctccagcgcc
     2341 tccggcaggc ccgccacgcg cagcgcttcc ggccccagcc gggccccgcg atggcccgca
     2401 cccacgtcgg tgggaacgcc aatcagggat acggagatgg gatgggccat gggtgcctcc
     2461 tgcgggggaa aaagaagcac agtctagcca gagctgtgtg acaccactcg cggcggtgca
     2521 gcagtgaatt ggcatggcat gatgccgcgc ggacccgccc ccgcttcacg gaagattgcg
     2581 atgtcgccct tcatcaacac cgcctggccc cgctttttca tggcggcgct gcccatcgcc
     2641 gtttttgcgg ttctgttgag caactccatc gatgcatcgc cgaacggctg gctgatgcag
     2701 gcgacgctcc ttctgacgcc cttctcgttt ctgctgttcc tcgggttggg ttggcagcgc
     2761 ctgcgcaagg cgcacgctga atacccgatc ctgaaaagcg aactgcaccg catgctggcg
     2821 gcgttgatcg gcaacgtgaa ggtggccgca ctgtggttcg gcctgaccgt cgtcggcatg
     2881 ttcgctctga tgctggcgtg ggtgctgctg tacaggcccg gcggctgacg ccagatctac
     2941 accccgcgct cagcgtccgc gtcggcgaac cggcgtcacg ctctgcacct ggccgttgtt
     3001 gcgcatcatg cacaggaagc ggccatcggg gtaatcgatg atcagttcct ggtagtcact
     3061 gcctaccggc atctgggtca ccagcgcacc ctgcgcgccc ttgcgtgcat tgcaggcgcc
     3121 cagtgcggta tcgcccgccg gcgcgggggt agccaccgtg gacacattgc ggaacaccgc
     3181 gcggcacccg ccattgaccc acaccaaatg ccgcgccaag ccccaattct tgccttcctc
     3241 gcagcgggtg cggctgagct ggcgcacgat ttccacgttg ccgcgggtgt tcaagtcgca
     3301 tgacacctgt tgctggccgg tggattcgca ggtgacttcg cgcggcagcg cggcatcccc
     3361 ggcggcagcg tcgcgagggc ctgcgccgtt tgcggcggac gcgggcgtgc ctgtggtgct
     3421 gacctggcag attccattgg caccgcctcg gccggtgtag ctgacctgcg gcgagccatc
     3481 atcgttgcgg ctgatcgaca gggtgatgcc gctgttggca tcacgtgctt cgaaatagcg
     3541 gtcgttgaag cgcttcaacg ccgtctcgcg gccctgcacg tagaccggcc ccccctcgtc
     3601 ggcgtgcaca tcgatgccac ccgggcaact ggcgttgaag aacggcacgg cggccacggc
     3661 cggggctgcg aaggcggtgg acaacagtgc ggcggtgagc ggcagggcgt ggcggcgcat
     3721 atgcagttcc cgaagggtgt gtgcccgcag tatgcggtgg ggtgcccggc gcggggcgtg
     3781 aggagaatga tgcaccgggc ggcgtgtttt tgcgtttgcg tttggtatgg tggttatggc
     3841 gccttgcgcg ggctgttaag ccagctttac ttcgcgggcg tttcaagacc tcgaaacagt
     3901 gctgattccg gtcgaactcc agcgaatgac tgcgctgcgc gatatgtcgt tttcggcatt
     3961 gcagcgactg aaacaggcca atcgcgataa ttcattcttc ctttcagatc acccgatgcc
     4021 atcggaaaaa acgactggca cgcgggcatt ctgcgtgcgc atgatgaatc gccacctgca
     4081 aaggtggtcg ggtcttccaa gcccgtttga ttgaagctgt atacgcttgc cagccggcgt
     4141 cgccttcccg aaagcggcgc cggctggcaa tccgttcacc ggtctacggc gggcggtgcg
     4201 tgggggcctt gtgcccgccg gctcatcgat caccggtctt ggaagccacg catcgcccgc
     4261 caccctctcg tggcggcgcc tctgtgcctg acgaggatgc ccgcatgtcc aagacgctct
     4321 acccgtacct gaccgccacg ctgggcgacg ccgccctgca cctgccgctg gaactggcgc
     4381 agccgctgga agccgccttc gctgctgcga gcgatgcgcc cgcgcccatc aacctccccg
     4441 cctgcctgcg ccgcatccag gccggcgatg ctgccgacgg acagccgtgg caggggccat
     4501 ccagcacgcc cggccacgcc gtggccgccg cacgccggga tcgcgccgcc acgggcctgg
     4561 tgtcgctgct ggagctgtac cacgccaacg aacgcgtgcg cgtggatggg gatgagaaag
     4621 acgatatcgg cgacggcgtg cgcgaagggc tgatgctggc ctgccggggg ctggccgagt
     4681 atgtggcgtt gcaggcgggt gaagctcggt aatgcgcact attgagcccc tcagcacgca
     4741 cctccgcaac ctcgcgcgcc ccgctctcaa gcgtacccag cccgctgccg gaatgagcac
     4801 accctttcca aacacgaggc ctgttctcgt cgaactgcag ctggacgaac ttgattcgcg
     4861 cggtggagtt gttgccgaga tgatcgcgtc caccgcaccc gtgatggcgc tttccatcag
     4921 tcctgaacgc atgtggtatg gcttcgtctt gaatgacaga gccatcaccc ggatacgtcc
     4981 aggaacacgg acaaactgca cgatctcttt catcgactac gatggtgcga aggaagcatt
     5041 cccgtgtggc accactgccg cgttcggcga tggcttgtcg acccaagggc tgatccgcat
     5101 catccggttt gactgagact gttcttgcca gatggtttga actgccaatg gctgatgcgt
     5161 agtgcatcaa tgcgccgggc gacacgcaag ctgtctcgaa ccagattgac ccaacgactc
     5221 ctcccttgcc gcgacattga gttgactcac cggcttggga cgaaaaaacc gccgagaggc
     5281 ggttttttca tgctcttccc ttgcgctcac ttccagtgac gcgccgacgc gtcaacgtcg
     5341 gcacatgtgc ttatgctgcg ctggcatgca ggcgcatacc caaggcacga gtcaccttca
     5401 ggatggtcgc gaaatcggga cttcgctcac cagagagtgc gcgatacaga ctctcccgtg
     5461 acaggcccgc cgcacgtgca actttgctca tgccttgcgc gcgcgcgatg tcgcccagcg
     5521 ccttggcgat gaaggccgaa tcgccatcgc tttcctcgat gcaggcatcg agataggcgg
     5581 ccatctcttc gggtgtccga agatgttcgg ccacatcaaa tgctttgagt tcgacttttt
     5641 tcttggtggc catgatggaa cagctccagt acttcggtat tgagtcgttt cgactacagc
     5701 cggttcgacg ctcacagggc acgtgctatc tccctgacct tttcgatatc gcgttgctgt
     5761 gagcttttgt cacctccgac cagaaaaatc agcaactgcc tgccgcgctg ggtgtagtac
     5821 acgcggtagc ccggccctgc atcgatacgc agttcggaaa caccgtccgc agatagcgat
     5881 gatcatccgg atgaccacca cgtcgcttga gctagaacgc gctgcttgag attcttccat
     5941 gataggagag agcagtcctc gcagacttga aggaagcgag cgttaccgac caatgtagtt
     6001 caggcgggag gatgcccttc accatatccg caacaattgg caaagcctga gatctagatt
     6061 taaccccagg gccgatgccg attgcacgcg tgagcactat cacatcaatg cgccggtact
     6121 tcaggaataa attaaacgtg ccaatcgctt cttgaattgc attggccagt ctttccttag
     6181 agactagtgc cgatgttgcc gcaacgacaa tctttggggt gtcttcgccg tgcgcatcgg
     6241 ttgagaaccc gctagcaagg aggtcgtcca catcgagctg cttgtgagag acgatgctca
     6301 gcgcagcttc gagatctgcc ccctggtaag tgcgcgatgc aaacacattc tttgcgctgg
     6361 acgactccga gtgaatcacg tccgatatcg tcttagatgt gatcttggca tccagcctga
     6421 ccttagcatt cttgatgaag tctgaaaggg tatacatcca gaatccagta acgccaccga
     6481 cgcgtcgcat ctccatagat aactcaggct gaggtcgctt cccggagatg gatcttgagt
     6541 ccagccacca gtcaggcttt atatctgacg taatcagaag aatgtgtcta atgtgcggct
     6601 gggacgcaaa cttaagcaac tctttccaaa ccatgtaatc gccatactgt ctgtcgtact
     6661 taaggccgtc gaacatgtag atgtcaccgg ctttatcagt gtccaagtag cccggcccca
     6721 tcttcacggc atatcgctcc gccgcctcgg cttcggcaac gtcgatgaca ctctgactag
     6781 aaggacgcga accaaattgg ccctcaagaa gtgcctcaac gaacgccagc actgcgtcct
     6841 tcttgttagg ggcgatgtag tgttcgcttt ccgtctgagc gaccttgatc agctccttgg
     6901 cggtttgccc aatggcatct agcttctctt caagctgagg ccagcatgcg cgctctttgt
     6961 taccctcact tttcactgcg gccctgaaag tttggtatgc acgctgcaca tccttggcca
     7021 attgctgcga agattcatac tcctgccgta gcacttccaa cctatttctg tggaactcga
     7081 ccaagacgtg ataaggaacc cacaggcgtg tcgcgagacc cttaagcatc tcaaatatct
     7141 ccgcacgcga tcccgctggc atccggtaga gacccaacag cacattggta tcgagagcga
     7201 tgacggcata tttccaaaga tccgctatct catcttcagt cgggtcaaag tatccagcaa
     7261 actgggtttt catacgcacc actccggcgg ttgccattcg tcatatttgg ctacattgat
     7321 cgtggcctct tcatatttac tctaaccaat cgggggtggt tctgctcgtt cggtagatga
     7381 aatagagttc caatcgtcag ccctgctatg acgcatccac cacactactc aaggtgtgat
     7441 tgagacggat gcaattccac gggcgaagta tcgtgctgta aagaagttgc gagcggcgcg
     7501 gccgggaggc ataccgtatt ccggtgccag ttctgcggca ccgcgctcat caagcccgca
     7561 gcataggttc ctgtgcggtg atttgtgcgc ctgcaataga ccaccctgcg gggcgacttt
     7621 cagcggtcac tcggaaccga ccggcgttcc tgaccccggt gctgtccccg acgtagttgc
     7681 ctgcgatttg ccaccgacgc ccagcttcga gcgctcgcag ctgcagcaac agtggaaggc
     7741 cgctaggagt gtcgatcatc tggacctcgt cgacgctatc gagacggagt gagcagcaag
     7801 cacgttcaac gtcgcgccgt aatcctgcac tccacctttc aaccttgtga cctggttgcg
     7861 ccgcagcagt agggaagtag cgcacatgat gcgcaataag gcaccacgct gtggctgggc
     7921 tgcggccaag gaccactcgt tcgtcaccct ctccaagcgc gaagcgcatg ttgtccatat
     7981 ccagaagctc cggcaggacg acgcactgcc cgtccaaatg aaggcccaca ttgccgcttg
     8041 tgggcagtat cgagaactgc cgaatggccc agccgcatag ttgtccgaat gaaagttgta
     8101 ggcgtggaga acacttccca cgctagaaga cttacacttc cggaagcagt ccgcagttcc
     8161 tacctgcagc agtggtgctg acctatgcca tgcgcctgcg tgccattgaa gtcgacgccc
     8221 tcaccctcac cgatgccagt gcgctaatgc agggcatccg cagcaatcgg tgcaaggtgc
     8281 ctcgtcacaa cgcgacgctc tggacgaaag aactgcgggc ggcagtgagg tagctgtaga
     8341 cctacctgga ccacggatac aggcatatgg gtgccccaaa accgatctgg ccgaagcagc
     8401 gattccttgt cgtttccgaa tccggcaccc cgctcacgaa atcgactctc ggcagcgctt
     8461 gtagcgcacg atccggcgcg cgattgttga gggcgtcgct gacaaggagc agagattcgc
     8521 accccgctgc ctgaaacatc ggggtatcac caacagcgaa gacaagtcat cgggcgggca
     8581 tgtaaccggg gccatgcgtc atctatacga tccctccgtg ccggaggtca gcgcagccgt
     8641 gaaaccaaga aagagccgct agttttcccg ccaattttcc cggtagacat aaagaggcca
     8701 gcgccccgcg ctgccctttt cgttgaaacc cccattttca aggcgtttcg gtgcttccct
     8761 tatggtgccg cttatccgaa tcgaacggat gacctactgt ttacaagaca gttgctctac
     8821 caactgagct aaagcggcaa ggttggatca ccggcggcag cgccgcggtc cggggattct
     8881 agcgcaaccg cgcgcattcc agcgaccggc tctgggccgc gccgctgcgc tgctgggcct
     8941 gggccggctg cgtgcctgcc gccagctggc cttccagcca ccactggccg gcgtcgccgc
     9001 tggccaccag ccgcggctgg aaaccggcgg cctgcaccgc cgccacgcgg cgctcggcgc
     9061 cctcgcggtt gcggtactgg cccagtgcca cggcgttgat gtcctcgccc tggctgatga
     9121 tgtagtagtc gctgaggccg gcggcgacga tgcgcttgac cgtggcctgt gcttcttccc
     9181 ggttggcggc agccggcagc agcacgcggt agcgggcact gccgctggcg gcgggctgtt
     9241 cgcgcaggcg cacctggctg atggcattgc cggccttgcc ctgtgcggcg gtcgcggcgg
     9301 cgcggtcggc aaatggtccc aatgcgacac agcgcggcgg ctccggggcg gctggcggcg
     9361 tcgcgggctt ttccgcaact ggtgcgggcg caggtttgac ggctgccgca acggccactg
     9421 gtgccggtgc aggtacggcc tcagccacct gcggcttggc cagctccggc ttggccggca
     9481 ccgcaggcgc gggcgtcgct gccacggcgg tcttctcggc cggttcgcgc tccatcagcg
     9541 gtgcggtcgg ggcggcagcg gtggcttcgg cagcggccgt cgcatcagcc ccacccggca
     9601 cccaacgcag ttcggccacg ccggccggtt gcggcggcgg cgcaggcgct tgcggcgcat
     9661 cgcgcagcag ccaccagcag gcgacgccaa gattgaggat ggccagtacg acgatcaggg
     9721 cacgggtcag catgcgcgga tactagcctg cgggctggtg taccgcccag cgggcgaggc
     9781 catccagcac cagcgacggg tggtagtcgg cgccgggcag cagcggcatc agcgccggtg
     9841 cgccaccacc gtgcaccagc agcgacggtg ccacgcccag cagcgcgtgc gcctgctgtg
     9901 cgctgcgttc aatcagcgcc acggccgcgc catcgcagcc ggatgccagc gcgtcggcgg
     9961 tgtcgttggc gaattcgctg tagtcgccac cagtggccgg cagctgcacc gcacgcgcgt
    10021 gcagtgcttc gcgcatggtg gtgggcgatg cggagatacg gccgccgtgg tgctggccct
    10081 cggcgtcgag cagatcaatg gtcaacgcgg tgcccacgcc aaccaccagc accgggcgct
    10141 gcgccttggc ggccgccagc agcgccagga agcgatcaac accgaacttt tccggcttgg
    10201 cataggcaat gcgcacgccc gcgcattcgg cgctggtgcg caccacgtgc acgtgttcga
    10261 agcggcgctg cagctggtcc agcatggcgc tggtcagcga cggtgcggcc acgctggcca
    10321 cgaacgcggt ggtgccgctg ggcaggctgt gcggtggctg cccggccatg ccttcggcgc
    10381 catgcgccca ggcctgcaca tcgccggcac ggtcaccctg caacggcgcg aacttgaagc
    10441 gcgagttgcc gaggtcgaac aaccaatcgc tcatgccgcc ctcacgctga cttcgccggc
    10501 gtgcagcagg cgttcctggc catcgatgcg cacgcgcagc gcgccatcat cggccaggcc
    10561 cagcgcggtg ccgtgttgcc actgcccttc cagctccacg cgcacttcgc gcccggccag
    10621 catgtcgaac gcggcatagc gcggcaggaa cggggcgagg ccttcgcgat cgaattcctc
    10681 cagcgccggc agcaggcgtg tcagcactgc ggcgaccacc acgttgcggt ccaccggctt
    10741 gccggccagc gtatccaggt ccacccatgg ctgggtgatc tgctcggcga acgcgggcgg
    10801 catgtgcgtg ttgatgccga tgccgatcac cgcgcgcgcc gggccggcgt attcgccacc
    10861 gccttcggcg agcaggccga ccagcttgcg gcggccatcg acgatcaggt cattcggcca
    10921 cttcagctgc gcctgggtga aaccgaggtc atgcagcgct tcggccaccg cgatgccggc
    10981 caccaggctc agcccggcca ggcggccgag gccaccggag tacaggcgca gcaccgacag
    11041 gtagacgtgc gcggccagcg gcgaggccca ggtacggcca cgacggccgc ggccaccggt
    11101 ctggcgttcg gccaaaagga cgctcacccc gcgctggggc gcgctgcaac gcagcaattc
    11161 ggcgttggtg gagtccaccg tccaggccac ctgcaggtgg tgcagcagcg gcagaacctg
    11221 ggcaggcagg ccgacgcgga tcgcgtccgg gtccagcagg tcgaccgggc gggtcaggcc
    11281 atagccttcg ccagcacggc cttccacgcc cacgccggca gccctaagtc cttgaatacg
    11341 cttccaaatg gccgcccggg tctggcccag ctcacgggcc agggcgtcgc cggacaggcg
    11401 accggcagcg agtttggcca gcaattggcg atcgtccacg gcagcttcca cgaagtcagg
    11461 acggaattat gcgggaaagc cgccagcgac gcccgccacg ctgggttccg caggggcttc
    11521 caacggggcg ccgggttcgg gctagaatcg ggaactcacc ttcccttaac gtggatgtcg
    11581 tcaatgcgcc gttatgccca ttgcctgatc ctgctgatga tgcccttcgc ggcgtctgca
    11641 acggcagcgc tggacgacag ccgtggggca tgcgtgtcct ccaatggcga tgccgcttcg
    11701 cagcgcgcac ccactgccag cgcatcggcc gccagcacca aggcggcacc ggtacgcccg
    11761 gccgccagca cgactaccgg cggcggtggc agcgatgacg acatgctgcc gcgcatccgt
    11821 gcaccgaagt ggcacagcta cctgccggga atgttccgct gatcaagtcg ttgctgcagt
    11881 ggctgcggcc tgcgccgcgg ccgattgacg atgcgctttg ggataacgcc tgccgccgcg
    11941 cggcctggtt gcacggcctg gacgacgcgc gtcgcgcgcg cctgcgcgtg ctggccacgc
    12001 gcttcctgca cgagaagacc atcaccccca tcggcgagct gcagctgcag cccggcgatg
    12061 gcgtgctgct ggccgcgctg tgctgcctgc cgctgctgga gttcggcgag gtggggctgg
    12121 aaggctggtc gcaactgatc gtctatcccg atgcgttccg cgtgcaccgc agccacatgg
    12181 atgcggccgg cgtgctgcac gaatgggatg acgagctgat tggtgaatca tgggacagcg
    12241 gtccgttgat cctgtcctgg gccgatgtgc aggccgacct ggcggcgccg cacgagggtt
    12301 actgcgtggc ggtgcacgag atggtgcaca agctggatgc gctggatggt gcgatggatg
    12361 gcacgccgcc gctgccgcgg caatggcagc gcgaatgggc ggggattttc cagcgtgcct
    12421 acgatgcgtt ctgtgcgcag gtggatgccg gcgaggaaac gctgatcgat ccgtatgcgg
    12481 ccgaggcgcc ggaagagttc ttcgcggtgg ccagcgagta ccacttctcg gcaccggatc
    12541 tgctgcagca ggcgttgccg gaggtggccg cgcagctgcg gcggttctat ggc
//
LOCUS       DAOKIP010000112        12586 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.112,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000112 DAOKIP010000000
VERSION     DAOKIP010000112.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 12586)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12586)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12586
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.112"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..864)
                     /locus_tag="QEL58_002565"
     CDS             complement(<1..864)
                     /locus_tag="QEL58_002565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_049465574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDS1677020.1"
                     /translation="MLHPTLPLNALRAFEAAARHQNFTRAALELCVSQAALSHQIRGL
                     EDRLGIRLFHRLPRGVALTDEGAALYPVLNESFERISASIARYTGGPAREVLTLGVVG
                     TFATGWLLPRLAAFESAHPDIELRLQTHNNRIDLAGEGLDLAIRFGDGDWQGQACTAI
                     LEAPFAPLCAPALARRLKQPRDLATLPLLRSYRGDEWPRWLQAAGVSGVEARGPVFDS
                     SLTVAMAAAGGAGVALLPLRMFEQELAEGRLLQPFATTLELGRYWLTRLRSRAEREPA
                     RRFREWLQAQGA"
     gene            1040..1951
                     /gene="blaL2"
                     /locus_tag="QEL58_002566"
     CDS             1040..1951
                     /gene="blaL2"
                     /locus_tag="QEL58_002566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L2 family class A beta-lactamase"
                     /protein_id="HDS1677021.1"
                     /translation="MLARRRFLQFSGIAVASSLALPLLARAAGAPTRVAPTEAAITAA
                     TDFAALEKACAGRLGVSLLDTASGRRVGHRQDERFPMCSTFKSMLAATVLSQAERAPA
                     LLDRRVPVRDADLLSHAPVTRRHAGKDMTVRDLCRATIITSDNTAANLLFGVVGGPPA
                     VTAFLRASGDTVSRSDRLEPELNSFAEGDPRDTTTPAAMAMTLQRVVLGEVLRPASRQ
                     QLADWLIDNETGDECLRAGLGKRWRVGDKTGSNGEDARNDIAVLWPVAGGAPWVLTAY
                     LQAGAISYEQRAMVLAQVGRIADRLIG"
     gene            2037..3251
                     /locus_tag="QEL58_002567"
     CDS             2037..3251
                     /locus_tag="QEL58_002567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012511906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HDS1677022.1"
                     /translation="MSHELIYLLLIFALLVIPRALQRFSLPAPLTCLLFGIIGMLWLG
                     DQAHDAVIGLLATLGISSLFLFAGLEVDLQALRRGMWPLLAHLVIRTGTLFGVGWLAW
                     RYAGLPWQAAGLLALALLTPSTGFIMDSLSRLGLSEDERFWVTSKAIAGELLALAALF
                     IVLQAGDPGHMALSSLALLAMMIGLPLLFIALGRWVAPHAPGSEFSLLVMVGMVAAYI
                     TYLLGVYYLVGAFIAGLVARLLHQRMPLLASHENLHALRLFASFFVPFYFFNAGTKVP
                     SEALSFEALGLGIVITLVVLPLRIGVVWLQRRVMFGESFRSSLRVSLALAPTLIFTLV
                     LAAIMRERFQIPAVLFGALLLYAALTTLLPSLVFRTPFDVDPVEQEPAGEGEAAPVAA
                     TETLPEAQPAPR"
     gene            3304..3945
                     /locus_tag="QEL58_002568"
     CDS             3304..3945
                     /locus_tag="QEL58_002568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677023.1"
                     /translation="MKLPAVITASALLLGLAACSQRSDTVAHDLATAPADAFMAAIAA
                     HCGQAYAGKVVEDTPAPTGKDPFAGQRLVMHVRGCADPAHELRIPFHVGDDHSRTWVL
                     TRTPNGLRLKHDHRHQDGSPDAITLYGGDSTPPGTAERQQFPADADSVAMFRRADMLA
                     STFNTWAMEIDPDQAFVYELTRPDGRRFRVQFDLSKPVDLPPAPWGDDKLPAP"
     gene            complement(4057..4794)
                     /locus_tag="QEL58_002569"
     CDS             complement(4057..4794)
                     /locus_tag="QEL58_002569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012511904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3011 domain-containing protein"
                     /protein_id="HDS1677024.1"
                     /translation="MKPLSLASLAVTLSLGALGTLALPVPSATAQNGVIRCESQSNRE
                     RVCNTGWRNAQLVRQLSGSPCEEGRTWGSRNGSIWVTSGCRAEFVESRGGWGGGNGGG
                     WGGNNGRPGDTIRCESQNNRERSCPVGWRNARLVRQLSGSPCDEGRTWGVRNGAVWVS
                     NGCRAEFAEARGWGGGGWGGGNSNYSVTCSSNNNRSQTCDWDDRQGRPVLQQQLSGSA
                     CQEGRSWGYARGQVWVSNGCRARFGTR"
     gene            4953..6704
                     /gene="aspS"
                     /locus_tag="QEL58_002570"
     CDS             4953..6704
                     /gene="aspS"
                     /locus_tag="QEL58_002570"
                     /EC_number="6.1.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--tRNA ligase"
                     /protein_id="HDS1677025.1"
                     /translation="MRTHFCGLVDETLIGQTVTLAGWTDVARNQGGVCFIDLRDHEGI
                     VQVTVEVDNAEVFAVAASLGYEDVLQVEGVVRARHAVNDKMRTGKVEVIATAITVLNK
                     AAPLPFHAHENPGEETRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDEKGFQDIET
                     PILTKATPEGARDFLVPARMHPGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEA
                     LRADRQLEFTQLDMEFAFVRERDVQDFVENMIRAIFKEVVEVELDASFPRMTWAEAMR
                     RYGSDKPDLRIALELVDVAELVKDSEFPVFTGPANDAEGRVAALRIPGGASLSRKQID
                     EYAAHAAKYGAKGLAYIKIADNGEVSSPIQKFFSEASFAALVAHVGAGNGDIVFFGAG
                     GYNKVSDFMGALRLKAGKDFGLVADGWAPLWVTDFPMFEWDEEEQRYVALHHPFTAPA
                     VDDIADLRANARTAVSRGYDMVLNGNEIGGGSIRIHRPDMQSAVFELLGIGAEEARAK
                     FGFLLDALNYGAPPHGGIAFGIDRIAALMAGTESIRDVIPFPKTTGAQDLMTDAPSPI
                     VDAQLAEVHIQVRPKTN"
     gene            6721..7053
                     /locus_tag="QEL58_002571"
     CDS             6721..7053
                     /locus_tag="QEL58_002571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005418522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HDS1677026.1"
                     /translation="MTEFAFSLEWEKLGNEGSEANLVTERARVFGGWLVRVGTNPAAM
                     ALTFVADGEGRWDGEDFGVEDYEDDEEEEYDEDEEGEEGEEEEDEDEEEYEEEDEEDE
                     AAEAPEKA"
     gene            7085..7606
                     /locus_tag="QEL58_002572"
     CDS             7085..7606
                     /locus_tag="QEL58_002572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005418521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDS1677027.1"
                     /translation="MYSIRRATVDDAPTLSALAARTFTETFGHLYPPQDLQAFLGEAY
                     SVERQRVILAHPDYAVWLLELDGEAVGHAAAGPCGLPHPEVKPGDGELKRLYLIKTQQ
                     SCGWGSRLLETALAWLEHEGPRTLWLGVWSENFGAQRFYARYGFEKAGEYLFPVGDTH
                     DLEFILRRAPRVA"
     gene            7682..8314
                     /locus_tag="QEL58_002573"
     CDS             7682..8314
                     /locus_tag="QEL58_002573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012511900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HDS1677028.1"
                     /translation="MTPPVLLLHGIWNARAWVGPLAWRLRARGFQVHAFGYSSVFGGP
                     DVAVPQLLERLTDAGPLSLVGHSLGGLLALEALRRQPQLDVQRVVCLGSPLRGSGTAR
                     SLSDHGWGLALGRSSELLLDGLPDWQGKAEVGLIAGSVPHGLGSLLGAMDDASDGTVA
                     LAETRLPGLSDHCVVRTSHSGLVVSPDAARQTAYFLRHGQFDHSRDAAAA"
     gene            8520..9251
                     /locus_tag="QEL58_002574"
     CDS             8520..9251
                     /locus_tag="QEL58_002574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014648165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebC/PmpR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HDS1677029.1"
                     /translation="MGRGPSIEARKNASDAKRGKIFTKIIREIGVAARGGGGDPNNNP
                     RLRVAMDKGLAVNMSKDVIERAIKKATGELEGVDYEEIRYEGYAPGGVAVIVDCLTDN
                     RVRTVADVRHAFSKCGGNMGTEGSVAFMFKRLGVISFAPGADEDAITEAAIEAGADDI
                     VVYPDDGSIDVVTSPDAFNAVKDAMTAAGHVAGHAEITFRADNDIKVEGEVALQVKKL
                     LDMLEDLDDVQDVYSNAELGADAYA"
     gene            9356..9877
                     /gene="ruvC"
                     /locus_tag="QEL58_002575"
     CDS             9356..9877
                     /gene="ruvC"
                     /locus_tag="QEL58_002575"
                     /EC_number="3.1.21.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="crossover junction endodeoxyribonuclease RuvC"
                     /protein_id="HDS1677030.1"
                     /translation="MTRILGIDPGSQRTGVGIIDVDAAGRVSHVHHQPLVLLGADDFP
                     QRMKLLVLGLADLCREYQPNEVAIEKVFMARNPDSALKLGQARGAAISAVVLRDLPVH
                     EYAASEIKLAVVGRGGAEKQQVQHMVGLMLNLKTKLQADAADALAVAITHAHVRATAN
                     RLGLSARQAWGRK"
     gene            9891..10484
                     /gene="ruvA"
                     /locus_tag="QEL58_002576"
     CDS             9891..10484
                     /gene="ruvA"
                     /locus_tag="QEL58_002576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011258432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration protein RuvA"
                     /protein_id="HDS1677031.1"
                     /translation="MIGRLRGIVAYKAPPWLVVDVNGVGYELEAPMSTFYDLPELGRE
                     VTLYTHYSQKEDSVSLYGFLREGERRLFRDVQKVSGIGAKIALAVLSGVTVEEFARMV
                     QAGDITALTRIPGIGKKTAERMVLELRDRAAQFGAGGALPTGSGPAPADPLSDATVAL
                     QQLGYKPAEAARMARDAFNEGDEVATVIRKALQSALR"
     gene            10603..12453
                     /locus_tag="QEL58_002577"
     CDS             10603..12453
                     /locus_tag="QEL58_002577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002808025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium transporter Kup"
                     /protein_id="HDS1677032.1"
                     /translation="MALIIGAIGVVFGDIGTSPLYTLKEAFSPHYGLNSDHDTVLGVL
                     SLAFWALNIVVTLKYVTIIMRADNDGEGGIMALMALTQRTLRNGSRSAYVVGILGIFG
                     ASLFFGDGVITPAISVLGAVEGLEVAAPGLHAFIVPITVVVLLMVFAAQRFGTEKIGK
                     AFGPITSVWFISLAAIGIYNIVDAPEVLKAFNPWWAIRFFMEHSWHGIFILGAVVLAV
                     TGGEALYADMGHFGAKPIRHAWYFFVLPCLVLNYLGQGALVLNHPEALKNPFFEAVPP
                     WALYPMIILATMAAVIASQSVITGAFSVSRQAMQLGYIPRMRIKHTSHDTIGQIYIPG
                     INWGIAVMVIGLVLAFRSSSNLAVAYGISVSATMLIDTLLLALVARSLWPKARNWILP
                     LCVVFFIIDLGFVIANGAKLLQGAWFPVVLGIFLFTMMRTWRRGRELLRDEIRKDGIR
                     LDTFLPGLMLAPPVRVPGTAVFLTADPTVAPHALMHNLKHNKVLHERNVFLHVETLPI
                     PYAMEGQRLKIESVGDEFYRVYVRFGFMETPDVPLALMRSCDHGGIYFDPMDTTFFAS
                     RETIVATANRGMPIWRDKLFALMHRNAAPATGFFRIPGNRLVELGAQVEI"
BASE COUNT         1962 a         4287 c         4241 g         2096 t
ORIGIN      
        1 tgcgccctgc gcctgcaacc attcgcggaa gcgcctggcc ggctcacgct cggcacgcga
       61 gcgcagtcgg gtcagccagt agcggcccag ctccagcgtg gtggcgaacg gctgcagcag
      121 ccggccttcg gccagttcct gctcgaacat gcgcagcggc agcagggcca cgcccgcgcc
      181 cccggcggca gccatcgcca cggtcagtga cgaatcgaac accggcccgc gtgcttccac
      241 gccactgacc ccggccgcct gcagccagcg cggccactcg tcgccgcggt aagagcgcag
      301 caacggcagc gtggcgaggt cgcgcggttg cttcagccgt cgtgccagtg ccggtgcgca
      361 cagtggcgcg aacggcgcct ccaggatcgc ggtgcacgcc tggccctgcc agtcgccatc
      421 accgaagcgg atcgccaggt ccagcccttc gccggccagg tcgatgcggt tgttgtgggt
      481 ctgcaggcgc agctcgatgt ccggatgcgc gctctcgaac gcagccagtc gtggcagcag
      541 ccagccagtg gcaaaggtgc cgaccacgcc cagcgtcagt acttcgcgcg ccggtccgcc
      601 ggtgtagcgc gcgatgctgg ccgagatgcg ctcgaacgat tcgttgagca cgggatacag
      661 cgccgccccc tcatcggtca gtgcgacgcc acgcggcagg cgatggaaca gccggatgcc
      721 gagccgatcc tccaggccac ggatctgatg gctcaacgcc gcctggctga cgcacagctc
      781 cagtgcggca cgggtgaagt tctggtggcg ggcggcggct tcgaaggcgc gcagcgcatt
      841 cagcggcagg gtggggtgca gcattgcgaa gtcgtgagct ggggtgatgg ctgatcctaa
      901 cgcctcaccg gattattccg taaaattaat gagttgaatg aggttggcat gaattcatct
      961 catgccaggc gctgattctt ttcgttggtc gcacctctgc gtggcgtcaa taatcgtgtg
     1021 gtccccagga gaactccgca tgctcgcccg ccgccgattc ctgcagttca gtggtattgc
     1081 cgttgcttcc tcgcttgccc tgccgttgct ggcacgtgcg gcaggagcgc cgacccgcgt
     1141 cgccccgacc gaggctgcga tcaccgcggc caccgatttc gccgcacttg agaaggcctg
     1201 tgccggccgc cttggcgtga gcctgctcga tactgccagc gggcgccgcg tcggccatcg
     1261 ccaggacgag cgcttcccga tgtgcagcac cttcaagagc atgctggccg ccaccgtgct
     1321 cagccaggcc gagcgcgcgc ccgcgctgct cgaccggcgc gtgccggtac gcgacgccga
     1381 cctgctttcg catgcgccgg tcacccgccg ccacgccggc aaggacatga cggtgcgcga
     1441 tctgtgccgt gccacgatca tcaccagcga caacaccgcc gccaacctgt tgttcggcgt
     1501 agtgggcggg ccacctgcgg tcaccgcctt cctgcgcgcc agtggcgata cggtcagccg
     1561 cagcgatcgg ctggagccgg aactgaacag cttcgccgaa ggcgatccgc gcgacaccac
     1621 cacgcccgcg gcgatggcca tgacgttgca gcgggtggtg ctgggcgagg tgctgcggcc
     1681 ggcctcgcgg cagcagctgg ccgattggct gatcgacaac gaaaccggcg acgaatgcct
     1741 gcgcgcgggc cttggcaagc gctggcgggt gggcgacaag accggcagca atggcgagga
     1801 cgcgcgcaat gacatcgccg tgctatggcc ggtggcgggc ggcgcgccct gggtgctcac
     1861 cgcctatctg caggccggtg cgatcagcta cgaacagcgg gccatggtgc tggcacaggt
     1921 cgggcggatc gccgatcggc tgatcggttg aggtaaccgg ggtcattcga aaatggcttg
     1981 ccggatcggt ccggcacgcg catcctgcgc gcgttcgaac cccacggaag accctgatga
     2041 gccatgagtt gatctacctg ctgctgatct tcgcgctgct ggtgatcccc cgcgcgctgc
     2101 agcgcttcag cctgccagcg ccgctgacct gcctgctgtt cggcatcatc ggcatgctct
     2161 ggctgggtga ccaggcgcac gatgcggtga tcggcctgct ggccacgctg ggcatttcct
     2221 cgctgttcct gttcgccggc ctcgaagtgg atctgcaggc cctgcgccgt ggcatgtggc
     2281 cgctgctggc gcacctggtg atccgcaccg gcacgctgtt cggcgtgggc tggctggcct
     2341 ggcgctacgc ggggctgccg tggcaggccg cgggcctgct ggcgctggcg ctgctgacgc
     2401 cctccaccgg cttcatcatg gattcgctgt cgcggctggg cctgagcgaa gacgaacggt
     2461 tctgggtgac cagcaaggcc attgccggcg aactgctggc gctggcggcg ttgttcatcg
     2521 tgctgcaggc cggtgatccg ggccacatgg cgctgtccag cctggccctg ctggcaatga
     2581 tgatcggcct gccgctgctg ttcatcgcgc tgggacgctg ggtggcaccg cacgcgcccg
     2641 gctcggagtt ctcgctgctg gtgatggtcg gcatggtcgc ggcctacatc acctatctgc
     2701 tgggcgtgta ctacctggtc ggcgccttca tcgccggcct ggtcgcgcgc ctgctgcacc
     2761 agcggatgcc gctgctggcc tcgcacgaga acctgcacgc gctgcgcctg ttcgcctcgt
     2821 tcttcgtgcc gttctatttc ttcaacgccg gcaccaaggt gcccagcgaa gcgctcagct
     2881 tcgaggcgct ggggctgggc atcgtgatca ccctggtggt gctgccgctg cgcatcggcg
     2941 tggtctggct gcaacgccgg gtcatgttcg gcgagagttt ccgcagcagc ctgcgcgtct
     3001 cgctggcgct ggcgccgacc ctgatcttca ccctggtgct ggcggcgatc atgcgcgagc
     3061 gcttccagat tccggcggtg ctgttcggcg cgctgctgct gtacgcagca ctgaccacgc
     3121 tgctgccgtc gctggtgttc cgcacgccgt tcgatgtcga tccggtggaa caggagccgg
     3181 caggcgaggg cgaggccgcg ccggtggcag ccaccgagac gctgccggag gcgcagcccg
     3241 cgccacgctg agcgggcacc tgcacggttt gcgcccatcg gcgcaggccg ttagggttgg
     3301 ggcatgaaac tgcctgccgt tattaccgct tccgccctcc tgctcggcct cgcggcctgt
     3361 tcgcagcgct ccgatacggt cgcccatgat ctggcgaccg caccggccga tgccttcatg
     3421 gcggccattg ccgcgcactg cggccaggct tacgccggca aggtggtgga ggacacgccg
     3481 gcacctaccg gcaaggaccc gttcgcgggc cagcgcctgg tcatgcacgt gcgtggctgt
     3541 gccgacccgg cacacgagct gcgcatcccg ttccatgtcg gcgatgacca ttcgcgcacc
     3601 tgggtgctga cccgtacgcc gaacggcctg cgcctgaagc acgatcatcg ccaccaggac
     3661 ggcagcccgg atgcgatcac cctgtacggc ggcgacagca cgccgccggg aaccgccgag
     3721 cgccagcagt tcccggccga tgccgattca gtggcgatgt tccgtcgggc cgacatgctg
     3781 gcctcgacgt tcaatacctg ggcgatggag atcgaccccg accaggcgtt cgtctacgaa
     3841 ctgacccgtc ccgacgggcg ccgtttccgc gtgcagttcg acctgagcaa gccggtcgac
     3901 ctgccgccag cgccctgggg tgacgacaaa ctgcccgcgc cgtgatcccg ggggcggatt
     3961 cctgaaagat cccgggtaga tccgcgccat gcgcggatgc gggatgccgg gccggggtca
     4021 gagccctggc catcggccag ggatccgacc ccatgctcag cgcgtaccaa accgcgcgcg
     4081 gcagccgttg ctcacccaca cctgcccgcg cgcatagccc cagctgcggc cttcctggca
     4141 ggcactgccg gacagctgct gctgcagcac cggccggccc tggcggtcat cccagtcgca
     4201 ggtctgcgag cggttgttgt tgctgctgca ggtgaccgag tagttgctgt tgccaccgcc
     4261 ccagccgccg ccgccccagc cgcgggcttc ggcgaattcg gcgcggcagc cgttgctgac
     4321 ccagaccgcg ccattgcgca cgccccaggt gcggccctcg tcgcaggggc tgccggacag
     4381 ctggcgcacc aggcgggcat tgcgccagcc gaccgggcag ctgcgctcgc ggttgttctg
     4441 gctttcgcag cggatggtgt cgcccgggcg gccgttgttg ccgccccagc caccgccgtt
     4501 gccgccgccc cagccgccac gggactcgac gaattcggcg cggcagccgc tggtgaccca
     4561 gatgctgccg ttgcggctgc cccaggtgcg gccttcctcg cacgggctgc cggacaactg
     4621 gcggaccagc tgcgcgttgc gccagccggt gttgcagacc cgttcgcggt tgctctggct
     4681 ttcgcagcgg atcaccccgt tctgcgcagt ggcggaaggg acgggcaggg cgagggtgcc
     4741 cagggcaccc aggctgaggg tcacggccag gctggccagg gacagcggtt tcatggcggc
     4801 atcccatacg gtggcaggtg cccgactata gggagggggg cgatcaagcc ggtgtgactg
     4861 gccggatttg ccccggccgg ggcctcggcc gcagaatacg aggctttccg gcccccatcc
     4921 ggtgccggcg ttctccagcg gagcttcccc ccatgcgtac ccacttctgc ggcctggtcg
     4981 acgagaccct gattggccag actgtcaccc tcgccggctg gaccgacgtg gcccgtaacc
     5041 agggcggcgt ctgcttcatc gatcttcgag atcatgaagg catcgtgcag gtgacggtgg
     5101 aggtggacaa cgccgaagtg ttcgccgtgg ccgcgtcgct gggctacgag gacgtgctgc
     5161 aggtggaagg cgtggtgcgt gcccgccatg cagtgaatga caagatgcgc accggcaagg
     5221 tggaagtgat cgccactgcc atcaccgtgc tgaacaaggc cgcgccgctg ccgttccacg
     5281 cccacgagaa cccgggcgag gaaacccgcc tgaagtaccg ctacctggac ctgcgccgtc
     5341 cggaaatgca gcgcatgcag cgcacccgca tcaagctggt gcaggcactg cgccgccacc
     5401 tggacgaaaa gggcttccag gacatcgaga ccccgatcct gaccaaggcc accccggaag
     5461 gcgcgcgcga cttcctggtg ccggcgcgca tgcacccggg cgagttctac gccctgccgc
     5521 agagcccgca gctgttcaag cagatcctga tggtggccgg cttcgaccgc tactaccaga
     5581 tcgcgcgctg cttccgcgac gaggccctgc gtgccgaccg ccagctggaa ttcacccagc
     5641 tggacatgga gttcgccttc gtccgcgaac gcgacgtgca ggacttcgtc gagaacatga
     5701 tccgcgccat cttcaaggaa gtggtcgagg tcgaactgga cgccagcttc ccgcgcatga
     5761 cctgggccga agccatgcgc cgctacggct cggacaagcc ggacctgcgc atcgcgctgg
     5821 aactggtcga tgtggccgaa ctggtcaagg acagcgagtt cccggtgttc accggcccgg
     5881 ccaatgacgc cgaaggccgc gtcgccgcgc tgcgcatccc gggcggcgcc tcgctgtcgc
     5941 gcaagcagat cgacgagtac gccgcgcacg ccgccaagta cggggccaag ggcctggcct
     6001 acatcaagat cgccgacaac ggcgaagtca gctcgccgat ccagaagttc ttcagcgagg
     6061 catccttcgc tgccctggtc gcccacgtcg gcgccggcaa cggcgacatc gtgttcttcg
     6121 gcgccggtgg ctacaacaag gtctccgact tcatgggcgc gctgcgcctg aaggccggca
     6181 aggacttcgg cctggtcgcc gacggctggg caccgctgtg ggtcaccgac ttcccgatgt
     6241 tcgagtggga cgaggaagag cagcgctacg tcgccctgca tcaccccttc accgcaccgg
     6301 ccgtggacga catcgccgac ctgcgcgcca acgcccgtac cgccgtctcg cgcggctacg
     6361 acatggtgct caacggcaat gaaatcggcg gcggttcgat ccgtatccac cgtccggaca
     6421 tgcagagcgc agtgttcgaa ctgctcggca tcggcgccga agaagcccgc gccaagttcg
     6481 gcttcctgct cgacgcgctg aactacggcg cgccgccgca cggtggcatc gccttcggca
     6541 tcgaccgcat cgccgcgctg atggccggca ccgaatcgat ccgcgacgtg atcccgttcc
     6601 cgaagaccac cggtgcacag gatctgatga ccgacgcgcc gtcgccgatc gtcgacgcgc
     6661 agctggccga agtgcacatc caggttcgcc ccaagaccaa ctgatcagga gatccaggca
     6721 atgaccgagt ttgcgttttc gctggagtgg gaaaagctgg gcaatgaagg ctccgaggcc
     6781 aacctggtca ccgagcgtgc gcgcgtgttc gggggttggc tggtccgcgt cggtaccaat
     6841 ccggcggcga tggccctgac cttcgtcgcc gacggcgaag gccgttggga tggtgaggac
     6901 ttcggcgtcg aggattacga ggacgacgaa gaggaagagt acgacgagga cgaggaaggc
     6961 gaggaaggcg aggaagaaga ggacgaggac gaagaggaat acgaggaaga ggacgaggaa
     7021 gacgaagccg cggaagcgcc ggaaaaggct tgacccgcgc gtcgccctga cgtcaacttc
     7081 ctgcatgtat tccatccgcc gcgccaccgt ggacgacgcg ccgaccctgt cggcgctggc
     7141 cgcccgcacg ttcaccgaaa ccttcggcca tctgtacccg ccgcaggacc tgcaggcctt
     7201 cctcggggag gcctactcgg tcgagcgcca gcgcgtgatc ctggcccacc cggattacgc
     7261 ggtgtggctg ctggagctgg acggggaggc ggtcggccat gccgccgccg gcccctgtgg
     7321 gctgccgcat ccggaggtga agcccgggga tggcgagctc aagcgcctgt atctcatcaa
     7381 gacccagcag agttgtggct ggggtagccg cctgctggaa accgcgctgg cctggctgga
     7441 gcacgaaggc ccgcgcacgc tgtggctggg cgtgtggtcg gagaatttcg gcgcgcagcg
     7501 cttctacgcc cgctacgggt tcgagaaggc cggcgagtac ctgttcccgg tcggtgacac
     7561 ccacgacctt gaattcatcc tgcgccgcgc accgcgcgtg gcctgacgtt caccgccgct
     7621 tgctgcgcgc gcgtgttcaa tccccgtacg ttcctgcccc gctgaccgcc aggctgtttg
     7681 catgactccc cccgtattgc tgctgcatgg catctggaat gcccgtgcct gggtcgggcc
     7741 gctggcctgg cgcctgcgcg cgcgcggttt tcaggtgcat gccttcggtt attcctcggt
     7801 gttcggcggc cccgatgtgg ccgtgccgca gctgctggag cgcctgaccg acgccgggcc
     7861 gttgtcactg gtcggccaca gcctgggtgg attgctggcg ctggaggcct tgcgccgcca
     7921 gccgcagctg gatgttcagc gcgtggtctg cctgggctcg ccgctgcgtg gcagcggcac
     7981 cgcgcggtcg ctgtccgacc atggctgggg cctggcgctg gggcgcagca gcgagctgct
     8041 gctggatggc ctgccggact ggcagggcaa ggccgaggtc ggcctgatcg ccggctcggt
     8101 gccgcatggg ctgggcagcc tgctgggcgc gatggacgac gcctccgatg gcacggtggc
     8161 gctggccgag acccgcctgc cgggtctttc cgaccattgc gtggtgcgca ccagccacag
     8221 cggcctggtg gtatcgcccg atgccgcacg gcagaccgcg tatttcctgc gccacggcca
     8281 gttcgaccac agccgcgacg ccgctgccgc atgattgagt gggtgcgaac cgttggttcg
     8341 cacgctcttc ggcctgcttt ggtgggtgcg aaccgtccta ccttggtggg tgcgaacctt
     8401 ggttcgcacg ctctttgccg ggccatgccc ggcgacatcc ctccgcccta gacacggttg
     8461 cagcgcgcga tcaggtagaa tccgcgcctt gatcctgaag cagccagacg gtagcaccca
     8521 tgggtagagg cccctccatc gaagcccgca agaacgcgtc cgacgcgaag cgcggcaaga
     8581 ttttcaccaa gatcatccgc gagatcggcg tggccgcgcg cggcggtgga ggcgacccca
     8641 acaacaaccc gcgcctgcgc gtggcgatgg acaagggcct ggccgtgaac atgtccaagg
     8701 acgtgatcga acgcgccatc aagaaggcca ccggtgagct ggaaggcgtc gactacgagg
     8761 aaatccgcta tgagggctat gccccgggcg gcgtggccgt catcgtggac tgcctgaccg
     8821 acaaccgcgt gcgtaccgtg gccgatgtcc gccatgcgtt cagcaagtgc ggcggcaaca
     8881 tgggcaccga aggctcggtg gccttcatgt tcaagcgcct gggcgtcatc agcttcgccc
     8941 cgggcgccga cgaggacgcc atcaccgaag ccgccattga ggccggcgcc gatgacatcg
     9001 tggtctaccc ggacgacggc tcgatcgacg tggtcaccag tcctgacgcg ttcaacgcgg
     9061 tcaaggacgc gatgaccgcc gccggtcatg tcgccggcca cgccgagatc accttccgcg
     9121 cggacaacga catcaaggtc gagggcgagg tcgccctgca ggtcaagaag ctgctggaca
     9181 tgctcgaaga cctggacgac gtgcaggacg tgtactccaa cgccgaactc ggcgccgacg
     9241 cctacgcctg agccgtcctg acggcctggg cgcgggccgt tgaacggtca ccgcggacag
     9301 acatgagccc atacgcctgc cagcgcttcc cgttccgtcc cgccaggagt gcggcatgac
     9361 ccgcatcctc ggcatcgacc ccggttcgca gcggaccggg gtcggcatca tcgatgtcga
     9421 cgccgccggc cgcgtcagcc acgtgcacca ccagccgctg gtgctgctgg gcgccgacga
     9481 cttcccgcag cgcatgaagc tgctggtgct gggcctggcc gacctgtgcc gggaatacca
     9541 gcccaacgaa gtggccatcg aaaaggtctt catggcccgc aaccccgatt cggcgctgaa
     9601 gctgggccag gcccgtggcg cggcgatttc cgccgtggta ctgcgtgacc tgccggtgca
     9661 cgaatatgct gccagcgaga tcaagctggc ggtggtcggc cgcggtggcg ccgaaaagca
     9721 acaggttcaa cacatggtcg ggctcatgct caacctgaaa accaagctgc aggccgacgc
     9781 ggccgacgcg ttggcggtgg cgatcaccca tgcccacgta agggcaacgg ccaaccgcct
     9841 ggggctcagc gcccgccagg cgtggggccg caaatgagga gctgcacgca atgatcggtc
     9901 gactgcgcgg catcgtcgcc tacaaggcgc cgccgtggct ggtggtggac gtgaacgggg
     9961 tgggctacga gctggaggcg ccgatgagca ccttctacga cctgcccgag ctcggccgcg
    10021 aggtcaccct gtatacccat tattcgcaga aggaagacag cgtctcgctg tacggcttcc
    10081 tgcgcgaggg cgagcggcgc ctgttccgcg acgtgcagaa ggtcagtggc atcggcgcga
    10141 agatcgcgct ggccgtgctg tccggggtga ccgtcgagga gttcgcgcgc atggtccagg
    10201 ccggtgacat caccgcgctg acccgcattc cgggcatcgg caagaagacc gccgagcgca
    10261 tggtgctgga actgcgcgac cgcgccgccc agttcggcgc gggcggggca ttgcccaccg
    10321 gcagtggccc ggccccggcc gacccgctgt ccgacgccac cgtggcgctg cagcagctgg
    10381 gctacaagcc ggccgaagcg gcgcgcatgg cgcgtgacgc cttcaacgag ggcgacgaag
    10441 tggccaccgt gatccgcaag gcgctgcagt cggcactgcg ctgagccgtc cttcttttcc
    10501 ccaacgaacc gcctgagccc cgccaggagt cccatgtcca gcagtcaaac cccgcacaca
    10561 gccgcccccg gtggccacgg tcacgcccct cccgcgggag gcatggcgct gatcatcggt
    10621 gcgatcggcg tggtcttcgg cgatatcggt accagcccgc tgtacaccct gaaggaggcg
    10681 ttctcgccgc actacgggct caacagcgac catgacaccg tgctgggcgt gctgtcgctg
    10741 gcgttctggg cgctgaacat cgtggtcacg ctgaagtacg tgaccatcat catgcgcgcc
    10801 gacaacgacg gcgagggcgg catcatggcg ctgatggcgt tgacccagcg cacattgcgc
    10861 aacgggtcgc gctcggccta tgtggtcggc atcctcggca ttttcggcgc ctcgctgttc
    10921 ttcggcgacg gtgtgatcac cccggcgatc tcggtgctgg gtgcggttga aggcctggag
    10981 gtggccgcgc ccggactgca tgccttcatc gtgccgatca cggtggtggt actgctgatg
    11041 gtgttcgccg cgcagcgctt cggcaccgag aagatcggca aggcgttcgg cccgatcacc
    11101 tcggtctggt tcatttcgct ggccgcgatc ggcatctaca acatcgtaga cgcgccggaa
    11161 gtgctcaagg ccttcaaccc gtggtgggcg atccgcttct tcatggagca cagctggcac
    11221 ggcatcttca tcctgggcgc ggtggtgctg gcggtgaccg gtggcgaggc gctgtacgcc
    11281 gacatgggcc acttcggcgc caagccgatc cgccacgcct ggtatttctt cgtgctgccg
    11341 tgcctggtgc tgaactacct ggggcagggc gcactggtgc tcaaccaccc cgaggcgctg
    11401 aaaaacccgt tcttcgaggc agtaccgccg tgggcgctgt acccgatgat catcctggcc
    11461 acgatggcgg cggtgatcgc ctcgcagtcg gtcatcaccg gtgcgttctc ggtctcgcgc
    11521 caggccatgc agctgggtta catcccgcgc atgcgcatca agcacacctc gcacgacacc
    11581 attggccaga tctacatccc cggcatcaac tggggcatcg cggtgatggt gatcggcctg
    11641 gtgctggcct tccgcagctc gtcgaacctg gccgtggcct acggcatctc ggtatcggcc
    11701 accatgctga tcgataccct gctgctggcg ctggtggcgc gttcgctgtg gccgaaggcg
    11761 cgcaactgga tcctgccgct gtgcgtggtg ttcttcatca tcgacctcgg cttcgtcatc
    11821 gccaacggcg ccaagctgct gcagggcgcc tggttcccgg tggtgctggg catcttcctg
    11881 ttcaccatga tgcgcacctg gcgccgtggc cgcgagctgc tgcgcgatga aatacgcaag
    11941 gacggcatcc gcctggatac cttcctgccc ggcctgatgc tggcgccgcc ggtgcgcgtg
    12001 ccgggcaccg cggtgttcct caccgccgac ccgaccgtgg ctccgcacgc gctgatgcac
    12061 aacctcaagc acaacaaggt gctgcacgag cgcaacgtgt tcctgcacgt ggaaaccctg
    12121 ccgatcccgt atgcgatgga agggcagcgg ctgaagatcg aatcggtggg cgatgagttc
    12181 taccgggtct acgtgcgctt cggcttcatg gagaccccgg acgtgccgct ggcgctgatg
    12241 cgctcgtgcg accacggtgg catctacttc gacccgatgg acaccacctt cttcgccagc
    12301 cgcgagacca tcgtcgccac cgccaaccgt ggcatgccga tctggcgcga caagctgttc
    12361 gcgctgatgc accgcaacgc cgcgccggcg acggggttct tccggattcc gggcaacaga
    12421 ttggtggaac tgggcgccca ggtggagatc tagggcctct tcctccttcg ataccgccat
    12481 gcacccatcc atgcatggca tggatctacc gtgtcgacca aggtcgacac ccaccaagag
    12541 cagcccatgt cattccgaca gatcgcagga atctgtcgaa ggcggg
//
LOCUS       DAOKIP010000113        12563 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.113,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000113 DAOKIP010000000
VERSION     DAOKIP010000113.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 12563)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12563)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12563
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.113"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(78..545)
                     /locus_tag="QEL58_002578"
     CDS             complement(78..545)
                     /locus_tag="QEL58_002578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012511865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4442 domain-containing protein"
                     /protein_id="HDS1677033.1"
                     /translation="MSTPLLSLYHRLQRWPAGSWLFSRAVCFKAPYFASIAPRITRLE
                     HGRCEGTLADRRSVRNHIGTVHAIAMCNLAELTAGLMVDASLPKGMRWIPKGMQVQYL
                     AKARGTLQAVALPAQPIVAAAEGYALPVTVSVRDRAGIEVFSAVIDMWMSPAK"
     gene            complement(622..3099)
                     /locus_tag="QEL58_002579"
     CDS             complement(622..3099)
                     /locus_tag="QEL58_002579"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010482731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase"
                     /protein_id="HDS1677034.1"
                     /translation="MSIVLPFLALLLAGAFVAYHRMRLVTWTLISVALLAACWFIPYV
                     NQTATIVAAAVLAVIAVPLLLPFIRKPLLTAPMMKVFRKVLPPLSQTERIALETGSVG
                     FEGELFTGDPDWNILLNYPKPQLTAEEQAFLDGPVEELCTMVNDWEITHVHADLPPEL
                     WAFIKKNKFFGMIIPKEYGGLGFSALAHHKVIQKLASVSSVVSSTVGVPNSLGPGELL
                     VHYGTQEQKDQYLPRLADGREVPCFGLTGPFAGSDATSIPDYGIVCKGEWNGEQVLGV
                     RLTFDKRYITLAPVASLIGMAFRMYDPDGLIGDTRDIGITLGLLPRDTAGVEIGRRHF
                     PLNSTFQNGPIKGKDVFIPLTQLIGGAAMAGKGWNMLNECLAVGRSITLPSTASGGAK
                     AGAAVTGAYARIRKQFGLSVGRFEGVEEALARIGGKAYKISALSQATAAAVDRGDVPS
                     VPSAIAKYHCTTMSREVISDMMDVIGGKGIILGPRNFAGRSWQAAPIAITVEGANIMT
                     RSLLIFGQGAILCHPWVLKEMKAAQDPDTRAGLQEFDRSLFGHIRFGISNAVRSFWFG
                     LTGARFGAAPGDAYTRRYFRKLDRYSANLALMADISMMTLGGKLKFKESLSGRLGDVL
                     SHVYMTSAMLKRYHDEGAPQADQPLLAWAFHDSVHKIEESLSAALRNFPIRPIGWLMW
                     ALIFPLGRRAEAPGDRLSRRVAALLMAPNEARDRLANGVFLTPCENNPGGRINSYLSK
                     AIMAEPVERKFLKALKSKGIEALDFKAQLDEAVAEGVITQDERSLLEELRTLTLDTIT
                     VDDFDTHELRAASYYDRQHKDPHSQAA"
     gene            complement(3096..4013)
                     /locus_tag="QEL58_002580"
     CDS             complement(3096..4013)
                     /locus_tag="QEL58_002580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005414240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDS1677035.1"
                     /translation="MVTSPTPAAFHDLRLDAAHGARLAATASDHGRRGRVLFAHGFGQ
                     TRHAWNATARALNAAGLQTLAYDARGHGDSDWNAADLPYHGEQFADDLIVLAGEQPRP
                     PVLVAASMGGLFGLLAESRWPGLFSAMVLVDITPRWDTAGVERILAFMTAHPDGFASL
                     TEAADVISAYMPHRPRKSEQSLRALLREDGHGRWRWHWDPRLVAELARDSEQHQDALA
                     EAARQVKCPLLLVSGGRSDLVTPQTVAEFLALAPHARHVQLPQATHMVAGDDNDAFTA
                     TVLDYLDVLPAADAAASSATNEHVTGARS"
     gene            4155..4757
                     /locus_tag="QEL58_002581"
     CDS             4155..4757
                     /locus_tag="QEL58_002581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006464233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HDS1677036.1"
                     /translation="MNQPDASAGEPRAGRNSRLSAEDWAQAALDLIAEQGVGAVAVEP
                     LARRLGVTKGSFYWHFPSRDALLQAALERWELFEQEQVFGSLEDVPDPRVRLRQLFQM
                     VAHEVQPHIIYSELLKALDHPMVRPVIDRVSQRRLDYLIASFRQAGLSSTDARHRARL
                     AYAAYVGFLQLSLQLQQPKQAREDFEAYVEHLIETLIPNG"
     gene            complement(4896..7649)
                     /locus_tag="QEL58_002582"
     CDS             complement(4896..7649)
                     /locus_tag="QEL58_002582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019237424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDS1677037.1"
                     /translation="MNFKSNKLRDAVLVALVAGVASTATAQAQEATNLDRISVTGSRI
                     KSTDIETSQPVLSLTRADIEKQGVTSVADILQRVAANGAALNRTFNNGGDGSAGVSLR
                     NLGAERTLVLVNGRRWTTGLDGSVDLNTIPTAMIERIDILKDGASTIYGSDAIAGVVN
                     IITKQNFDGAEVNAYKGQYSDGDGEREAYDFTLGTVTDRASITVGASYVNEKSVMAGD
                     RKISAGGPPFYSGQSATGIPGNYTRNDEQYIILNGVETPFDPNIHGYNTAPDNYLLTP
                     NERTSLFVLGSYNLTDNITFRTEAMYNERKSEQLLAAMPVTGQRLSAGSMYNPYGVDL
                     TGVNRRFNESGGRSFNQNVKNWHFYGGFEGFFEFAGRNFDWDVGYRYDKTDQNDLTYG
                     LFNKQRLAEAYGPSALRDGKPVCLNSAGAVIAGCAPINPLGGLGSISQEALDYVSFTA
                     HDSASLVSKGYYANISGEIVQLPAGALGFAAGYEYRKESGQFDPDAFIASGLSTGNGA
                     APTKGAYDLNEFFVELSIPVLADLPGAKLLDFSVASRYSDYSNFGNTTNNKFGFRWKP
                     IDDLMIRGNYSEGFRAPSINNLYRGDADSFETYIDPCSSNAGLRTGAVAAQCAAQGVP
                     GNFIQPGAGAGRKQTVVPFTWQANPNLKPETSTSKTLGLVWSPSFVTGLNVTLDWWQI
                     KVEDAITRPAIQDIMSYCYGGTPQQQATYCGLITRDPNYGSTNQRYTITNVNMPLQNL
                     ASYKVEGWDLGLAYRLPETSFGQFTISWDSTYLSKWDTKSTQDSPVEGRQGRYRDQDP
                     YWRIRSNLYVDWSYGDFGVNWGLRYKSGMREECPFDPVKDPETFPYCSDGAKGENHIA
                     STTYHDIQVRYNTPWKGTIMLGLNNAFDKDPPVSYSVRANMFDPQYDLPGRYMYMQYK
                     QKF"
     gene            complement(8040..8888)
                     /locus_tag="QEL58_002583"
     CDS             complement(8040..8888)
                     /locus_tag="QEL58_002583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019336413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677038.1"
                     /translation="MRTFLRLPLALLIALGAIAGAHAQSKDTRTVLPVWNKGSGKVEA
                     LLYLEPTGEQAAGARWHFGRNSLDAAFGLSSGDSLGLLCNSSSGTSISGLASHCMLAS
                     LGDDDDLNSRRFTGTAALNRGNSRLGITAGTGRETLPAWLSGPNKTPSLRAEQNDLTV
                     FAQKNIGREGFVSIAGTYAKARLVPLADASPAIVDRWDSKSLSIGAGYGNFTGSIIGR
                     VVDVPGKPGKWEGLGIGLTWRTPWSGQLTVGAENVISRGKNPFSPRNESNDDGTVPYV
                     RYEQDL"
     gene            complement(9005..9898)
                     /locus_tag="QEL58_002584"
     CDS             complement(9005..9898)
                     /locus_tag="QEL58_002584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005414237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp33 family molecular chaperone HslO"
                     /protein_id="HDS1677039.1"
                     /translation="MTANSDSLIRFLLPDAGVRGVHVRLQATWQEILSHAQYPDTAAE
                     LLGEACVASALFTGHTKIDGRLSIQLRSSTALRTLFAECTAAGTLRGIAQLSDGADAP
                     RDLSSLGDDALLAITIENPGLDPREPQRYQSLVGLTAPELDEAFEDYFRQSEQLPTRL
                     LLAADRTGAAGLLLQKLPGDEGDEDGWARASALFETLGKAELLATPAEQLLHRLFHEE
                     KPELMGSKPLSFACSCSRERVASMLQSLGEDEARAAAEATNAVEVRCEFCGREYHFPL
                     TEFGILFHGAEGTVPAPERLQ"
     gene            9976..10725
                     /gene="mtgA"
                     /locus_tag="QEL58_002585"
     CDS             9976..10725
                     /gene="mtgA"
                     /locus_tag="QEL58_002585"
                     /EC_number="2.4.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="monofunctional biosynthetic peptidoglycan
                     transglycosylase"
                     /protein_id="HDS1677040.1"
                     /translation="MGAAGEQHKVEAGVDVPRRRRWRWKRLLWLPVLLAAFSCMQVLV
                     LRFIDPPGSMVMLWRYGEALGEADWSYRLHYQWRDLDQMAPSLPISLVAAEDQRFPDH
                     NGFDLQAIEKARDHNAKGGRLRGASTISQQVAKNLFLWQGRSWVRKGLEVWYTVLIEA
                     LWPKERILEMYANIAEFGDGVYGAQAAAQKFWGKDAARLSPAESARLAAVLPAPRRYN
                     AAAPGPYVQRRAAWIQRQARQLGGAAYLSEE"
     gene            10790..11809
                     /locus_tag="QEL58_002586"
     CDS             10790..11809
                     /locus_tag="QEL58_002586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HDS1677041.1"
                     /translation="MTRERLTFVIAAYNEALALPLLHPRLCAVLDGMPDIEGHILYVD
                     DGSHDDTWSVIAGLAQADARVSALKLSRNFGKEAALTAGLDLVREGAAMILDADGQDP
                     PELVPQFVARWREGHDNVYGTRMARDGEAWVKRATAAMFYRVMGRLSRTPIPADTGDF
                     RLLSPRALSALREMRERHRFMKGLFSWVGFKRVAVPYHRHARVAGTSKFSLWRLWNFA
                     LEGITGFSTVPLRAATYLGLATAAVAFVFGLWVIVKAALYGDRVAGWPTMMAVILFLG
                     GVQLIALGLIGEYLGRLYEESKQRPLYLVDAWLASAVADSALQPTLGGQADDHGTATV
                     GRQVS"
     gene            11769..12200
                     /locus_tag="QEL58_002587"
     CDS             11769..12200
                     /locus_tag="QEL58_002587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HDS1677042.1"
                     /translation="MTTVRQLLDGKSPEVHAVAPDAAVIDAIRLMAEKGIGAVLVMDG
                     PRLVGILSERDYARKIVLRDRSSRDTAVAEIMTAQVVTVSSGEQVEHCLQLVTDFRIR
                     HLPVVDGAQVLGVISIGDLVKSVIDAQRRELDQLQQYIVAG"
BASE COUNT         2097 a         3860 c         4377 g         2229 t
ORIGIN      
        1 cggcttcacc cctccggccc aaccgataaa ccgctttcag cgtccaacca cgaggggctg
       61 cgccgttcgc gggaacccta tttcgccggc gacatccaca tgtcgatcac cgcgctgaac
      121 acctcgatgc ccgcacggtc gcgcacactc accgtcaccg gcagtgcgta gccttcagcg
      181 gccgccacga tcggctgtgc cggcaacgcc accgcctgca gcgtgccacg tgccttggcc
      241 aggtactgca cctgcatgcc cttcggaatc cagcgcatgc ccttcggcag cgaggcatcc
      301 accatcagcc cggcggtcag ctcggccagg ttgcacatcg cgatcgcgtg caccgtgccg
      361 atgtgattgc gcacgctgcg gcggtcggcc agcgtgcctt cgcaacggcc atgctccagg
      421 cgggtgatgc gcggcgcgat gctggcgaag tagggcgcct tgaagcacac cgcgcgcgag
      481 aacagccagc tgccggcggg ccagcgctgc aggcggtgat agagcgagag caggggcgtg
      541 gacatggtgg gtattccggt cggcggataa agcgacggcg ggccgaggcc cgccgtcgaa
      601 ggcaacgcgt gtcgcgggcg gtcaggccgc ctgcgaatgc gggtccttgt gctggcggtc
      661 gtagtaactg gccgcgcgca gttcgtgggt gtcgaagtcg tccacggtga tcgtgtccag
      721 ggtcagcgtg cgcagctctt ccagcaggct gcgctcgtcc tgggtgatca cgccttcggc
      781 cacggcttcg tccagctgcg ccttgaagtc cagcgcctcg atgcccttgc tcttcagcgc
      841 cttcaggaac ttgcgctcca ccggctcggc catgatcgcc ttgctcaggt agctgttgat
      901 gcggccaccc gggttgttct cgcacggggt caggaacacg ccattggcca ggcggtcgcg
      961 ggcttcgttc ggcgccatca gcagggcggc cacgcgacgg ctcaggcggt cgcccggggc
     1021 ttcagcacga cggcccagcg ggaagatcag cgcccacatc agccagccga tcggacggat
     1081 cgggaagttg cgcagggcgg ccgacagcga ttcctcgatc ttgtgcacac tgtcatggaa
     1141 ggcccaggcc agcagcggct ggtcggcctg cggtgcgcct tcgtcgtggt agcgcttgag
     1201 catggcgctg gtcatgtaga catggctcag cacgtcgccc aggcggccgg acagcgattc
     1261 cttgaacttc agcttgccgc cgagcgtcat catcgagatg tcggccatca gcgccaggtt
     1321 ggccgagtaa cggtccagct tgcggaagta gcggcgcgtg taggcgtcgc ccggggcggc
     1381 accgaagcgc gcgccggtca ggccaaacca gaacgaacgc acggcattgg agatgccgaa
     1441 acggatgtgg ccgaacaggc tgcggtcgaa ctcctgcagg ccggcacggg tgtccggatc
     1501 ctgcgccgcc ttcatttcct tcagcaccca cgggtggcag aggatcgcac cctggccgaa
     1561 gatcagcagg ctgcgggtca tgatgttggc accttccacg gtgatcgcga tcggcgcggc
     1621 ctgccagctg cggccggcga agttgcgcgg ccccaggatg atgcccttgc cgccgatcac
     1681 gtccatcatg tccgagatca cttcgcggct catggtggtg cagtggtact tggcgatcgc
     1741 cgacggcacc gacggcacgt cgccacgatc aaccgccgca gcggtagcct gcgacagcgc
     1801 gctgatcttg tacgccttgc cgccgatgcg ggccagcgcc tcttcaacgc cctcgaagcg
     1861 gccgaccgac aggccgaact gcttgcggat gcgggcatag gcgccggtca cggcggcacc
     1921 ggccttggcg ccgccgctgg cggtggacgg cagggtgatc gaacggccca cggccaggca
     1981 ctcgttgagc atgttccagc ccttgccggc catcgcggcg ccaccgatca gctgggtcag
     2041 cgggatgaac acatccttgc ccttgatcgg accgttctgg aaggtcgagt tgagcgggaa
     2101 gtggcgacgg ccgatttcca cgccggcggt gtcgcgcggc agcaggccca gggtgatgcc
     2161 gatgtcgcgg gtgtcgccga tcaggccatc cgggtcgtac atgcggaagg ccatgccgat
     2221 caggctcgcg accggggcca gggtgatgta tcgcttgtcg aaggtcaggc gcacgccgag
     2281 aacctgctcg ccgttccact cgcccttgca gacgatgccg taatcgggaa tcgaggtggc
     2341 gtcggaaccg gcgaacggac cggtcaggcc gaagcacgga acctcgcggc catcggccag
     2401 gcgcggcagg tactggtcct tctgttcctg ggtgccgtaa tgcaccagca gttcacccgg
     2461 gcccagcgaa ttcggcacgc caacggtgga gctgaccacc gaggacaccg aggccagctt
     2521 ctggatcacc ttgtggtggg ccagcgcgga gaagcccagg ccgccgtatt ccttcggaat
     2581 gatcatgccg aagaacttgt tcttcttgat gaaggcccac agttccggcg gcaggtcggc
     2641 atggacgtgg gtgatttccc agtcgttgac catggtgcac agctcttcga ccgggccatc
     2701 gaggaaggcc tgctcttcgg cggtcagctg cggcttgggg tagttcagca ggatgttcca
     2761 gtccggatca ccggtgaaca gctcgccttc gaaaccgacc gagccggttt ccagcgcgat
     2821 gcgctcggtc tgcgacagcg gcggcagcac cttgcggaac accttcatca tcggggcggt
     2881 cagcagcggc ttgcggatga acggcagcag cagcggcacg gcgatcaccg ccagcaccgc
     2941 ggccgcgacg atcgtggcgg tctggttgac gtagggaatg aaccagcagg cggccagcag
     3001 ggccacgctg atcagcgtcc aggtaaccag ccgcatgcgg tggtaggcga cgaacgcgcc
     3061 tgccagcagc agggcgagga agggaagaac gatgctcatg agcgtgctcc ggtgacgtgc
     3121 tcgtttgtgg cggacgaagc tgcagcatcc gctgcgggca acacgtccag atagtccaac
     3181 acagtagcgg taaaggcgtc gttgtcatcg ccggcgacca tatgcgtggc ctgcggcagc
     3241 tgtacatggc gcgcgtgcgg cgccagcgcc aggaattcgg ccacggtctg cggcgtgacc
     3301 aggtcactgc ggccgccgct gaccagcagc agcgggcatt tcacctggcg tgcggcttcg
     3361 gccagcgcat cctgatgctg ctcgctgtcg cgggccagct cggccaccag gcgcggatcc
     3421 caatgccagc gccagcggcc gtggccgtcc tcgcgcagca gtgcacgcag cgactgctcg
     3481 gacttgcgtg gccggtgcgg catgtaggcc gagatcacgt cggcggcctc ggtcagcgac
     3541 gcgaagccat cgggatgggc ggtcatgaac gcaaggatgc gttcgacacc agcggtgtcc
     3601 cagcgcgggg tgatgtcgac cagcaccatt gccgagaaca ggccgggcca gcgcgattcg
     3661 gccagcagcc cgaacaggcc gcccatcgac gcggcaacca gcaccggcgg gcgcggttgc
     3721 tcgccggcca ggacgatcag gtcatcggcg aactgttcgc cgtgatacgg caggtcggcg
     3781 gcattccagt ccgaatcgcc atggccgcgg gcatcgtagg ccagggtctg caggccggcc
     3841 gcgttcagcg cgcgcgcagt ggcattccag gcgtggcggg tctggccgaa gccatgcgcg
     3901 aacagcaccc ggccgcgacg gccgtggtca ctggcggtcg ctgccaaacg cgcgccatgg
     3961 gcagcgtcca ggcgcaggtc atggaacgca gcgggagtag gggacgtaac cataccggat
     4021 agtatggatt gcttgagggg gaagtcaata ctgcatggta tggtgcactg cggcaggggg
     4081 gccggcaggg cccgtaacgg tctccaccgc aacggcgtac tgcaacgaac cccggcgtat
     4141 ggttaaatca gcccatgaat caacctgacg cttccgccgg cgaaccgcgc gccggccgca
     4201 acagccgcct gagtgccgaa gactgggccc aggcggccct cgacctgatt gctgaacaag
     4261 gtgtaggtgc cgtcgcggtg gaaccgttgg cacggcgcct gggtgtgacc aagggcagtt
     4321 tctactggca tttcccctcg cgcgatgccc tgctgcaggc ggcgctggaa cgctgggaac
     4381 tgttcgaaca ggaacaggtg ttcggcagcc tcgaggatgt gcccgatccg cgcgtacgcc
     4441 tgcgccagct gttccagatg gtcgcgcacg aagtgcagcc gcacatcatc tacagcgaac
     4501 tgctgaaggc gctggatcat ccgatggtgc gcccggtgat cgaccgcgtg tcgcagcgtc
     4561 gcctggacta cctgattgcc tcgttccgcc aggccgggct cagctccacc gatgcgcggc
     4621 atcgcgcgcg cctggcgtat gccgcgtatg tcggcttcct gcagctgtcg ctgcagctgc
     4681 agcagcccaa gcaggcccgc gaggatttcg aggcctatgt cgagcacctc atcgagacgc
     4741 tgattccgaa cggttgaaga tcgccgtagc tggtcacgag aaagccgcgg cattgccgcg
     4801 gcttttttct tgcgtgccgt ccacgtattg ccggcggcaa aaagaacaac ggccccttgc
     4861 ggggccgttg ctgcatcagc tgatcagtgg atcgatcaga acttctgctt gtactgcatg
     4921 tacatgtagc ggcccggcag gtcgtactgc gggtcgaaca tgttggcacg gaccgagtag
     4981 gacaccggcg gatccttgtc gaacgcgttg ttcagaccca gcatgatggt gcccttccac
     5041 ggggtgttgt agcggacctg gatgtcgtgg taggtggtcg acgcgatgtg gttctcgccc
     5101 ttcgcaccgt cggagcagta cgggaaggtc tccggatcct tgaccggatc gaacgggcat
     5161 tcttcgcgca tgccggactt gtagcgcagg ccccagttga cgccgaaatc accgtagctc
     5221 caatccacat acagattgga gcggatgcgc cagtacggat cctggtcgcg gtaacggccc
     5281 tgacggcctt caaccggcga atcctgggtc gacttggtgt cccacttgga cagataggtg
     5341 ctgtcccagc tgatggtgaa ctggccgaac gaggtctccg gcaggcggta ggccagtccc
     5401 agatcccagc cttccacctt gtacgatgcc aggttctgca gcggcatgtt gacgttggtg
     5461 atggtgtagc gctggttggt gctgccgtag ttcggatcac gcgtgatcag gccgcagtag
     5521 gttgcctgct gctgcggggt gccgccgtag cagtagctca tgatgtcctg gatcgccggg
     5581 cgggtgatcg cgtcttcaac cttgatctgc caccagtcca gggtgacgtt caggccggtg
     5641 acgaagctcg ggctccacac caggcccagc gtcttgctgg tcgaggtttc cggcttcagg
     5701 ttcggattgg cctgccaggt gaacggcaca accgtctgct tgcgacccgc accggcacct
     5761 ggctgaatga agttgcccgg aacaccctgt gcggcacact gcgcggcaac cgcaccggta
     5821 cgcaggccgg cgttggacga gcagggatcg atgtaggtct cgaaggagtc cgcatcgccg
     5881 cgatacaggt tgttgatgct cggcgcgcgg aagccttcgg agtagttacc gcggatcatc
     5941 aggtcgtcga tcggcttcca gcggaagccg aacttgttgt tggtggtgtt gccgaagttg
     6001 ctgtagtcgg agtagcgcga tgccacgctg aagtccagca gcttggcgcc cggcaggtcc
     6061 gccagcaccg ggatcgacag ttccacgaag aactcgttca gatcgtaggc gcccttggtc
     6121 ggtgccgcac cgttgccggt gctcaggccc gaggcaatga aggcatccgg atcgaactga
     6181 ccactttcct tgcggtactc gtaaccggca gcgaagccca gcgcaccggc cggcagctgc
     6241 acgatctcac cggagatgtt ggcgtagtag cccttcgaca caaggctcgc cgagtcatgt
     6301 gcggtgaagg acacgtagtc cagcgcttcc tgcgagatcg agcccaggcc gcccagcgga
     6361 ttgatcggtg cacagccagc gatgacagca cccgccgagt tcaagcagac cggcttgcca
     6421 tcgcgcagag ccgacgggcc ataggcctcg gccagacgct gcttgttgaa caggccgtag
     6481 gtcaggtcgt tctggtcggt cttgtcgtag cggtagccga cgtcccagtc gaagttgcga
     6541 ccggcgaact cgaagaagcc ttcgaagcca ccgtagaagt gccagttctt gacgttctgg
     6601 ttgaacgaac gaccaccgga ttcattgaag cgacgattga cgccggtcag gtcgacgcca
     6661 taggggttgt acatgctgcc cgcgctcagg cgctggccgg tcaccggcat ggctgccagc
     6721 agctgctcgg acttgcgctc gttgtacatc gcctcggtac ggaaggtgat gttgtcggtc
     6781 aggttgtacg aacccagcac gaacagcgag gtgcgctcgt tcggggtcag caggtagttg
     6841 tccggtgcgg tgttgtagcc atggatgttc ggatcgaacg gggtttccac accgttgagg
     6901 atgatgtact gctcgtcgtt gcgagtgtag ttgcccggga tgccggtggc gctctggccg
     6961 ctatagaacg gcgggccacc ggcggagatc ttgcgatcgc cggccatcac ggacttttcg
     7021 ttgacgtagg acgcgccgac ggtgatcgag gcgcggtcgg tcacggtgcc cagggtgaag
     7081 tcatacgctt cacgctcgcc gtcgccgtcg ctgtactggc ccttgtaggc gttgacttca
     7141 gcaccgtcga agttctgctt ggtgatgatg ttcaccacgc cggcgatggc atccgaaccg
     7201 tagatggtcg aggcaccgtc cttcaggatg tcgatgcgct cgatcatcgc ggtcgggatg
     7261 gtgttcaggt cgacgctgcc gtccaggccg gtggtccagc ggcggccatt gaccagcacc
     7321 agggtgcgct cggcaccgag gttgcgcagg ctgacgccgg ccgagccgtc accgccgttg
     7381 ttgaacgtac ggttcagggc ggcgccgttg gcggcgacgc gctgcaggat gtcggcgacc
     7441 gaggtcacgc cctgcttttc gatgtcggcg cgggtcaggc tgagcaccgg ctgcgaggtt
     7501 tcgatgtcgg tgctcttgat gcgcgaaccg gtgaccgaga tgcggtccag gttggtcgct
     7561 tcctgagcct gggcggtggc agtggacgcc acaccggcaa cgagcgcgac caggacggcg
     7621 tcgcgcagct tgttggactt gaagttcatt ggctctctct ctccaagaaa tcttggctgg
     7681 gtgattgcct gcgtacggag cgaaaaggcg ctccaaaaaa cgcgaggctg agccgatagt
     7741 actggtgcgt tctcaaaaat taaaggtgtg ttaatacagg ccgtggcagg gctgaatacg
     7801 ataggggtag gccgttgacg tcattgaatt caatgacttg aggtcgttct tgcccagctc
     7861 gccagtactt cgttagtttc atgtgaaaga aaatatttcg gttgttgcag cgcgcaggcg
     7921 aaagaattct gtctgtccat cgtccattca gcattgctgc ggcgcaaaaa aagaacgggc
     7981 gccctgcggc acccgttccc attcaacccc cggattatga gcccgccggt gctttccggt
     8041 cagaggtcct gctcgtagcg gacgtacggc acggtgccgt cgtcattgct ttcattgcgc
     8101 ggcgagaacg gattcttgcc gcggctgatc acgttctcgg cgcccacggt gagctggccg
     8161 gaccaggggg tacgccaggt cagcccgatt cccaggcctt cccacttgcc aggcttgccc
     8221 ggcacgtcga cgacacgccc gatgatgctg ccggtgaagt tgccgtagcc ggcgccgatg
     8281 ctcaggctct tgctatccca gcgatcgacg atggccggtg aggcatcggc cagcggtacc
     8341 aggcgggcct tggcataggt gccggcgatg gagacgaagc cctcgcggcc gatgttcttc
     8401 tgcgcgaaca cggtcaggtc gttctgctcg gcgcgcagcg aaggggtctt gttcgggcct
     8461 gacagccagg ccggcagggt ttcacggccg gtaccggcgg tgatgcccag gcggctgttg
     8521 ccacgattca gtgcggcggt gccggtgaag cggcggctgt tgaggtcgtc atcgtcgccg
     8581 aggctggcca gcatgcagtg actggccagg ccgctgatgc tggttccact gctgctgttg
     8641 cagagcaggc ccagcgaatc gccggaggac aggccgaagg cggcatccag cgagttgcgg
     8701 ccgaagtgcc agcgggcgcc ggccgcctgt tcgccggtgg gttccagata cagcagggcc
     8761 tcgaccttgc cgctgccctt gttccacacc ggcagcacgg tacgggtgtc cttgctctgc
     8821 gcatgcgcgc ccgcaatcgc gccaagggcg atcagcaggg ccagcggtag acgcaggaag
     8881 gtacgcatcg gaccagttca gacagggatg aacaacggaa gttcccgcgg aaacgggaac
     8941 ttgatcgtag ggtgtttatg aattcttaac aagccttgat ccccccagat gcaagaccag
     9001 ccgattactg aagccgttca ggtgccggca cagtcccctc ggcaccgtgg aacagtatgc
     9061 cgaactccgt caaaggaaag tgatactcgc gcccgcagaa ttcgcagcgc acctcgactg
     9121 cgttggtggc ttcggcggcg gcacgggctt cgtcctcgcc cagcgactgc agcatcgatg
     9181 cgacccgttc acgcgagcag gagcaggcga aggacagcgg cttgctgccc atcagctcgg
     9241 gcttctcttc gtggaacagg cggtgcagca actgctcggc cggggtggcc agcagttcgg
     9301 ccttgcccag ggtctcgaac agggcgctgg cgcgggccca gccgtcctcg tcaccttcgt
     9361 cgcccggcag cttctgcagc agcaggccgg cggcgccggt gcggtcggcg gccagcagca
     9421 ggcgggtggg cagctgttcg gactggcgga agtagtcctc gaaggcttcg tccagttccg
     9481 gtgcggtcag gccgaccagg ctctggtagc gctgcggttc gcgcgggtcc aggcccgggt
     9541 tctcgatggt gatcgcgagc agggcgtcat cgcccaggct ggacaggtcg cgcggcgcgt
     9601 cggcaccgtc gctgagctgg gcgatgccgc gcagggtacc tgcggcggtg cattcggcga
     9661 acagggtgcg cagggcggtg ctgctgcgca gctggatcga caggcggcca tcgatcttgg
     9721 tgtggccggt gaacagcgcc gaggccacgc aggcctcgcc gagcagttcg gcagcggtat
     9781 ccgggtactg ggcgtgggac aggatctcct gccaggtggc ctgcaggcgc acgtggacgc
     9841 cacggacgcc agcgtcgggc agcaggaagc ggatcaggga atcggagttg gcggtcatcg
     9901 gctcacatcg cgcgtaaacg gaggcggttg ccggataatg cgccgacaac cagacagaag
     9961 aaggatgcac cagtaatggg ggcagcggga gagcagcaca aggtcgaggc cggggtggac
    10021 gtgcctcggc gcaggcgctg gcgctggaag cggctgctgt ggctgccggt gctgctggcc
    10081 gccttcagct gcatgcaggt actggtactg cggttcatcg acccgcccgg gtccatggtg
    10141 atgctgtggc gctacggcga ggcgctgggc gaggcggact ggtcctatcg gctgcactac
    10201 cagtggcgcg acctggacca gatggcgccc agcctgccga tctcgctggt ggcggccgag
    10261 gaccagcgct ttcccgacca caatggtttc gacctgcagg ccatcgagaa ggcgcgcgac
    10321 cacaacgcaa aggggggccg cctgcgcggt gccagcacga tcagccagca ggtggccaag
    10381 aacctgttcc tgtggcaggg ccgcagctgg gtccgcaagg gccttgaggt ctggtacacg
    10441 gtgctgatcg aagcgctgtg gccgaaggag cgcatcctgg agatgtacgc caacatcgcc
    10501 gagttcggtg atggtgtgta tggcgcacag gcggcggcgc agaaattctg gggcaaggac
    10561 gcggctcggc tgagcccggc cgaaagcgcg cggctggcgg cggtgctgcc ggcacctcgg
    10621 cgctacaacg cggcggcgcc ggggccctat gtacagcggc gtgcggcatg gatccagcgc
    10681 caggcgcggc agctgggtgg ggcggcgtac ctgtcggagg agtgaggagg cggcctgccg
    10741 ggtctgcagg cggcggcccg catgcgtgcc ggcaacgtac aatccgggca tgacccgtga
    10801 acggcttact tttgtcatcg ccgcctacaa cgaggccctg gcactgccgt tgctgcatcc
    10861 gcggttgtgc gcggtgctgg atggcatgcc cgacatcgaa ggtcacatcc tgtatgtgga
    10921 cgacggcagc cacgacgaca cctggtcggt gatcgccggc ctggcccagg ccgatgcgcg
    10981 ggtctcggcg ctgaagctct cgcgcaactt cggcaaggag gccgcgctga cggccggcct
    11041 ggacctggtg cgcgaggggg cggcgatgat cctcgatgcg gacggccagg acccaccgga
    11101 gctggtgccg cagttcgtcg cgcgctggcg cgaggggcac gacaacgtct atggcacgcg
    11161 catggcccgc gatggcgagg cctgggtcaa gcgcgccacg gcggcgatgt tctaccgggt
    11221 gatggggcgc ctgtcgcgca cgccgatccc cgccgacacc ggtgacttcc gcctgttgtc
    11281 gcctcgcgcg ctgagcgcac tgcgcgagat gcgcgagcgt catcggttca tgaagggcct
    11341 cttcagctgg gtcgggttca agcgggtggc cgtgccctat caccgccatg cgcgcgtggc
    11401 cggcaccagc aagttcagcc tgtggcggct gtggaacttc gccctggagg gcatcaccgg
    11461 tttctcgacc gtgccgctgc gggccgccac ctatctgggg ctggcaacgg cggcggtggc
    11521 gttcgtgttc ggcctgtggg tgatcgtcaa ggcggcgctg tatggcgacc gggtggcggg
    11581 ctggccgacg atgatggcgg tgatcctgtt cctgggcggc gtgcagctga tcgcgctggg
    11641 cctgatcggc gagtacctgg gacggctgta tgaagagtcc aagcagcgcc cgctgtacct
    11701 ggttgacgcg tggctagcat cggccgtggc agactcggcc ctgcaaccca ccctcggagg
    11761 gcaggcggat gaccacggta cggcaactgt tggacggcaa gtctcctgaa gtacatgcgg
    11821 tcgcgccgga tgcggcggtg atcgatgcga tccggttgat ggcggaaaag ggtatcggcg
    11881 cggtgctggt gatggatggg ccgcgactcg tcgggatcct gtccgagcgc gactacgcac
    11941 gcaagatcgt gctgcgggat cgttcgtcgc gcgatacggc ggtggccgag atcatgacgg
    12001 cgcaggtggt gacggtgtcg tcgggcgagc aggtggagca ctgcctgcag ctggtgaccg
    12061 atttccgtat ccgccacctg ccggtggtgg acggcgcgca ggtgctgggg gtgatttcca
    12121 tcggtgacct ggtgaagtcg gtgatcgatg cacagcgcag ggagctggat cagctgcagc
    12181 agtacatcgt ggcgggatga gttgttcgct ggcgggcctg cggcccgccg gcccgctttt
    12241 caaaccagag ccagagccag agcgcaagag cagcgccttc ctggtacgcc gggaggctga
    12301 gggcatgggc gtgcaggaca cgccgcaagt acgtccctgt aggctcgatg gcgccatcca
    12361 tggcgccaac ggtcctgcac gcccatgccc tctacctctg gatacattgc cgcgagcgcg
    12421 gtgagattcg ccgcagacga tctgcttttg gtagctgcca accttggttg gcaacagctt
    12481 ttgactttgc ttttttcttt tgactttgaa tttccgctct cgttccgcgc gcgcaggaaa
    12541 ctgtcaggag ggggatgggt ggc
//
LOCUS       DAOKIP010000114        12528 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.114,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000114 DAOKIP010000000
VERSION     DAOKIP010000114.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 12528)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12528)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12528
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.114"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            1..225
                     /locus_tag="QEL58_002588"
                     /pseudo
     CDS             1..225
                     /locus_tag="QEL58_002588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014038482.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
     gene            458..3319
                     /locus_tag="QEL58_002589"
     CDS             458..3319
                     /locus_tag="QEL58_002589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005411031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDS1677043.1"
                     /translation="MIHLHHRPLAVAVALCVTALAPLGAAAQSTTNLDAVEVTGTRIK
                     RAEVEGQVPIQTLTRGDIERTGLTSIGEVLQQLTGSGSALNAKFNSSGNFGFPPDGSG
                     VGAGSAQVDLRHLGAKRVLVLVDGIRWVNESSASGVGSATDLNTIPLAIVERIEVLED
                     GASSLYGSDAIAGVVNIITRRDFDGGQVTLNYGEYSKGDGTQKGVDLAWGKSGDRFSL
                     FLGASWTKQDPVFAKDREQSRFPIPGTGLAFGSGGIPQGRFAFVDPNTGASQNIVPNT
                     GVSNPRYDGSAGCNRTDDYHCFTSADRFNFAEYNMVLTPSERKGLFGQFRFDITDNVQ
                     WYVKALGNRRESTNQAGPEPLFFGPDGATGNPLADNIVVSRLNPYNPFGFDLVSGDNM
                     SLIGRRPVEGGARVFKQKVDTTYFATGLVGDFHAADRSWYWDVNGMYSKNKAEQTNYG
                     SYDIYKVNMALGDPAVCAATPGCVPLNIFGGVGSITPDMLKWIQPVVRDRSQNELSLF
                     TANLSSELFSLPAGPVSFATGFEYRKYKGSYQPDPLTVIGHYNGVPSQPTSGSYDVNE
                     AYLELSVPIFADSSFGKKLDLSLAGRYSDYSTFGGEFTPKYGLRWQVTDDFVLRTTYA
                     EGFRAPSIGELYGSAARADLQLFDPCSVGLGGTPPRGSAANCAALGVPAGFQQANSQI
                     SVTTGGNRELDPERSRSFSAGFVWSPWFGNNASWSERFDVEVTFYRHAIDGAIQAINA
                     QTQLDLCVDTLDPIYCNGITRASTGAVSSFNNRLTNLGSIKTDGWDVDLFWTLPQTSI
                     GQFKLAWKNTFVGRYEATGAAGQKQPQKPGVEVADSSIPEWTSNASIGWTMDRWSANW
                     TVRHISELTENCGDAAVFPVCSNQAAGTNTLSATTFHDMQVGYKIDWMKGLQLTAGLN
                     NVFDKDPPICLSCSLNGYDASTYDIPRGRYWYLRADLRF"
     gene            complement(3406..5565)
                     /gene="fhuE"
                     /locus_tag="QEL58_002590"
     CDS             complement(3406..5565)
                     /gene="fhuE"
                     /locus_tag="QEL58_002590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferric-rhodotorulic acid/ferric-coprogen
                     receptor FhuE"
                     /protein_id="HDS1677044.1"
                     /translation="MIRSTSPVLPHRLSAAVLSALSLAIAPAAFADTAADPTTLDKVV
                     VKGERAEGYSVRRTSAGTRFDLAPREIPQSISIISHQRIEDQKLDDIIDVLANTTGVT
                     STQSDSERTEFYARGFYIDAYQFDGLPTQMVQNWSYGDSGLDLALYDRVEVVRGATGL
                     LSGAGNPSASVNLIRKHADSAELTGSVSVNVGSWGRTRTTVDVGSALNASGTVRGRVI
                     GSYLDTDGQMDRYNQRKTLGYAVIDADLTPDTQLSVGYDYQQKRANGATWGGFPMLYS
                     DGSRTPYDESFNASPDWTYWDTTSKRAFATLQHAFSNGWKFKIGATHDETKADDKLFY
                     PAYNNWVTGASNFNKTTGAGISPSAGFYNTERKVNAVDGYVDGPFRLFGREHQFMAGL
                     SYNKREYANYGDYQVGGANLLWDPFASYFNWTGNISQPNWNPLALASRGTITQKAGYL
                     ATRLSLADPLKLILGARYTDWKSEGENDDREHKVTTPYAGLVYDLNDTWSAYTSYTEI
                     FQPQTARDRNDRYLDPVDGKSYEVGVKAAWFDNRLNASLAVFRIEQDNVAQATNEPII
                     GRPGELASIAARGTVSRGFEFEVNGELAPGWNATFGASRYVAKDINGSDINTNLPQTA
                     LKLFTSYTPQSLQELTVGGGANWQNRIYYTVPAYGRIEQSGYALVSAFVRYRISPEFS
                     VQANLNNLLDKKYLSQINGYGAFGDGRNGSLTFTWSF"
     gene            complement(5795..6271)
                     /locus_tag="QEL58_002591"
     CDS             complement(5795..6271)
                     /locus_tag="QEL58_002591"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677045.1"
                     /translation="MTRLRTIAPFVTLALLATSCSTVQARRDPLCAHLLAFANSASIG
                     TQPAIELVSDWSSFSKHCTHGGTLAGRQFCDWLLPNTSTEFATINIQRTLACLAPGTN
                     YAGSERLFPEYVTGKVQSLDVRGLEADVVITVEYAVGIEGERPRMNIQAERLPPQD"
     gene            complement(6347..6898)
                     /locus_tag="QEL58_002592"
     CDS             complement(6347..6898)
                     /locus_tag="QEL58_002592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012481256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HDS1677046.1"
                     /translation="MSILNSPARRLRRWLLRGLWLAIAVVAGVALWNSPWAAAPKMLW
                     TLARMPAATELPVPVEGVRPRQIADTFGAPRGRDRSHAGIDIFARRGTPVRSATPGVV
                     ADVSERGLGGRQVWVIGPGRERYYYAHLESWADGLARGQVVRPGDLLGHVGDSGNAKG
                     TPPHLHWGIYGSQGARDPLPLLR"
     gene            complement(6989..7471)
                     /locus_tag="QEL58_002593"
     CDS             complement(6989..7471)
                     /locus_tag="QEL58_002593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010480910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC family transcriptional regulator"
                     /protein_id="HDS1677047.1"
                     /translation="MAIAPVLDSFDRAILDLLQRDNTLPQREIAEAVHLSTPAVQRRI
                     KRLQDSGVIAANVAVVAAAKVGRPLTIIVEVRVVSEQRERVAPFKRRVQDDPAVQQCY
                     SITGDGDFLLLLSAASMEEYEAITERLFGGDDNIERFRTSVALGTLKRSFEVPLLPPL
                     "
     gene            7544..8413
                     /locus_tag="QEL58_002594"
     CDS             7544..8413
                     /locus_tag="QEL58_002594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014038476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HDS1677048.1"
                     /translation="MQTSRFAPMLPALAVLGSVTSLAIGTSYAKHLFPLIGAQGTSAL
                     RVGFSALLLLLFWRPWRWKTSRVDAITILRYGLTLGLMNLLFYMALRTIPFGIAVAIE
                     FTGPLTVAMLSSRRPIDFVWVGCAVVGLLLLLPLGGGPALDPAGVLYAMGAAACWGLY
                     IVFGKRAGHLHAGHSVSLGLLAASLVVVPVGVVHAGAALLDPKILAAGLLVALVSSAI
                     PMSLEMMALKRLPKETFGILISMEPAVAALWAMLLLHEHLHGLQWLAIGCTVLASVGS
                     TMTARRLKVPVTA"
     gene            complement(8479..9216)
                     /locus_tag="QEL58_002595"
     CDS             complement(8479..9216)
                     /locus_tag="QEL58_002595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005419292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease/exonuclease/phosphatase family
                     protein"
                     /protein_id="HDS1677049.1"
                     /translation="MLTANIQAGSSTRRYSDYVTRSWSHALPAGRKRSSLDAIATLAR
                     EHDIVGLQEADPGSLRSGFTNQTHYLAQRAGFNYWSHQPNRRMGGVASSANGLLSKLE
                     PVEVQDHALPGRIGGRGVLLAKFGDGADGLAVAVAHLSLGAGSRMSQLGFIAELLSDH
                     PNAVLMGDFNCLAERPEMQVLYQKTRLQPPGCIVPTFPSWRPDRAIDHILVSSGLQTR
                     TVEAVPAAFSDHLALAMAIDVPADALR"
     gene            complement(9270..10103)
                     /locus_tag="QEL58_002596"
     CDS             complement(9270..10103)
                     /locus_tag="QEL58_002596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014038475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbA/DsbL"
                     /protein_id="HDS1677050.1"
                     /translation="MKTRFAALALAALLPILAACKADDGSANTTAAPAEPAPAPASTE
                     PAAPAAGAEGAAPAAAEGDKAAAEAAPAAAPAPTTAALTGPAPVEGADYQVIPNGQPF
                     QPAAGKIEVTEIFGYVCPACAAFQPLVGPWKAGLPSDVNFVYVPAMFGGTWDDYARAF
                     YAAQTLGVQEKTHEALYAAIHSQKTLKGERGRDSVDDIAKFYGAYGVDPKQFAATMGS
                     FAVNAKTNSAKQFAQRSQISGTPSIIVNGKYLVKGKSFPDMLRIADHLIARERGAAQA
                     H"
     gene            complement(10210..10860)
                     /locus_tag="QEL58_002597"
     CDS             complement(10210..10860)
                     /locus_tag="QEL58_002597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005414470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbA/DsbL"
                     /protein_id="HDS1677051.1"
                     /translation="MRLIPRLLLSLLVLLPLAASAAAPASAPLVEGKDYERIAQPGPF
                     QPLAGKIEVVEVFGYTCPHCAHFEPQLEAWAAKLPADVRFTPVPAAFGGAWDAWALAY
                     YAADEVGVAKRSHAAVFKALHQDGALPMQNISADELANFYKAYGVAPDRYLQALRGEA
                     VQKKVDAARAFAQRTKVPGTPAIIINGQYLVRGNSFDDQLRIASALIAQARAARGR"
     gene            complement(10967..11767)
                     /locus_tag="QEL58_002598"
     CDS             complement(10967..11767)
                     /locus_tag="QEL58_002598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010480905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c4"
                     /protein_id="HDS1677052.1"
                     /translation="MRHARVLAVSALATAVVVAAAAFAQTTLTPLPDNGPINTASLEV
                     DFSKTHWGDAKAGQAKASACAACHGADGNATVEMYPSIAGQSERYVAQQMALIANGQR
                     SSGAAVAMVPFVQNLTPQDMRDIGAYFATQKATAGIADDTAVTDGPYKGMKFYEIGQQ
                     LYRGGDAKRGLPACMACHGPSGAGNPGPAYPHLGGQHASYVARRLQEYQAGQTHETDK
                     THFQIMATVAQKLSEQEVQALSSYLQGLHNKADDLAAAATPTQPAAAP"
     gene            11924..12526
                     /locus_tag="QEL58_002599"
     CDS             11924..12526
                     /locus_tag="QEL58_002599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014038472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihA family ribosome biogenesis GTP-binding
                     protein"
                     /protein_id="HDS1677053.1"
                     /translation="MSLLIERARYHLSAHNVRQLPPDEGAEVAFAGRSNAGKSSALNA
                     LTRQNALARVSKTPGRTQQLVFFQITPDAHLVDLPGYGYAKVPLDLQAHWQAFIDRYF
                     RTREALKGLVVVMDIRHPLKDYDRQMLSYAVQRGMPAHALLTKADKLSRSQQMQTLQK
                     VRKELHSAYGDSVSVQVFSGEDRTGVDEARAVIGGWLGLE"
BASE COUNT         1974 a         4002 c         4360 g         2192 t
ORIGIN      
        1 cctgaagggg caaccgctgg atatgccggc gctgcagcag gtgctggcgc aggcgcagca
       61 gctgccactt ccacgtcgcc cggcggtgcg cctgtggacc gccgacgaca ccgattacca
      121 ggcatggcgc gtgtgctgct ggctgtcagc cagcacggcc tgcgcgtgga agcactcggc
      181 cgcccgtggc ggcactggca agacggcttg atggaagacg gttgatctcg gcgcacgctg
      241 tcgcagctgg catttgtgct gtgcaccgcg aagagtaccg tccggtctta atcggtcgct
      301 atttgacgta atcggccgtc aattgcgtca attccgtgtg aaagagtgtc gatcatcacg
      361 ccgtgatttt taccgcttgt ttacaaagga gacgctgccg ccatgcaggg gggagcgcgg
      421 cagccaatgt cccgacattc ctttggagag agagcgaatg attcacctgc atcaccgccc
      481 gttggcggtt gccgtcgcgc tgtgcgtgac ggccctggca ccgctgggtg ccgctgcaca
      541 atccaccacc aacctcgatg cggtggaagt caccggtacc cgcatcaagc gcgctgaagt
      601 cgaaggccag gtgccgatcc agaccctgac ccgcggtgac atcgagcgca ccggcctgac
      661 ctcgatcggc gaggtgctgc agcagctcac cgggtccggt tcggcgctca acgccaagtt
      721 caattcgtcc ggcaacttcg gcttcccgcc cgatggcagt ggcgtgggcg ccggttcggc
      781 gcaggtcgat ctgcgccacc tgggcgccaa gcgcgtgctg gtgctggtcg atggcatccg
      841 ctgggtcaat gaatcgtctg cgtcgggcgt gggctcggcc accgacctca acaccattcc
      901 gctggccatc gtcgaacgca tcgaagtgct ggaggacggt gcgtcatcgc tgtacggctc
      961 cgacgccatt gccggtgtgg tcaacatcat cacccgccgc gatttcgatg gcggccaggt
     1021 cacgctgaac tacggcgaat acagcaaggg cgacggcacg cagaagggcg ttgacctggc
     1081 ctggggcaag agcggcgatc gcttcagcct gttcctgggc gccagctgga ccaagcagga
     1141 cccggtgttc gccaaggatc gcgagcagtc gcgcttcccg attccgggca ccggcctggc
     1201 gttcggcagt ggcggcattc cgcagggccg cttcgccttc gtcgatccga acaccggcgc
     1261 ctcgcagaac atcgtgccca ataccggtgt gagcaatccg cgttacgacg gcagcgccgg
     1321 ctgcaaccgc accgatgact accattgctt caccagcgcc gaccgcttca acttcgccga
     1381 atacaacatg gtgctgacgc cgtcggagcg caaaggcctg ttcggccagt tccgcttcga
     1441 catcaccgac aacgtgcagt ggtacgtcaa ggcactgggc aaccgccgcg agtcgaccaa
     1501 ccaggccggc ccggagccgc tgttcttcgg ccccgacggt gccaccggca atccgctggc
     1561 cgacaacatc gtggtctcgc gcctgaaccc gtacaacccg ttcggcttcg acctggtgtc
     1621 cggcgacaac atgagcctga tcggccgccg cccggtggaa ggcggtgcgc gcgtgttcaa
     1681 gcagaaggtg gacaccacct atttcgccac cggcctggtc ggcgacttcc atgccgccga
     1741 ccgcagctgg tactgggacg tcaacggcat gtacagcaag aacaaggccg aacagaccaa
     1801 ctacggcagc tatgacatct acaaggtgaa catggcgctg ggcgatccgg cggtgtgtgc
     1861 ggccaccccg ggctgcgtgc cgctgaacat cttcggcggc gtcggctcga tcaccccgga
     1921 catgctgaag tggatccagc cggtggtgcg cgaccgcagc cagaatgaac tgagcctgtt
     1981 caccgccaac ctgtccagcg agctgttctc gctcccggcc ggcccggtgt ccttcgccac
     2041 cggcttcgag taccgcaagt acaagggttc ctaccagcct gatccgctga cggtgatcgg
     2101 ccactacaac ggcgtaccgt cacagccgac ctccggctcc tatgacgtca acgaggccta
     2161 cctggagctg agcgtgccga tcttcgccga ctcctcattc ggcaagaagc tcgatctcag
     2221 cctggccggg cgctattcgg attactccac cttcggtggc gagttcacgc ccaagtacgg
     2281 cctgcgctgg caggtgaccg acgacttcgt gctgcgcacg acctatgccg aaggcttccg
     2341 cgcaccatcg atcggtgaac tgtacggctc ggccgcgcgt gccgacctgc agctgttcga
     2401 tccgtgctcg gtgggcctgg gtggcacgcc gccgcgtggc agtgcggcca actgtgccgc
     2461 gctgggcgta ccggcgggct tccagcaggc caactcgcag atctcggtga ccaccggcgg
     2521 caaccgcgag ctggatccgg aacgttcgcg cagcttcagc gccggcttcg tgtggagccc
     2581 gtggttcggc aacaacgcgt cgtggtcgga gcgcttcgat gtggaggtga ccttctaccg
     2641 ccatgccatc gacggcgcga tccaggcgat caatgcgcag acccagctgg acctgtgcgt
     2701 ggatacgctg gacccgatct actgcaatgg catcacccgt gccagcaccg gtgcggtcag
     2761 cagcttcaac aaccgcctga ccaacctggg gtcgatcaag accgatggct gggacgtgga
     2821 cctgttctgg acgttgccgc agacctccat cggccagttc aagctggcct ggaagaacac
     2881 cttcgtcggc cgttacgagg ccaccggtgc ggccgggcag aagcagccgc agaagcccgg
     2941 cgtggaagtg gccgacagtt cgattccgga gtggaccagc aacgccagca tcggctggac
     3001 gatggaccgc tggagcgcca actggacggt gcgtcacatc tccgagctga ccgagaactg
     3061 cggcgatgct gcggtgttcc cggtgtgcag caaccaggcg gccggcacca acacgctgtc
     3121 ggccaccacg ttccacgaca tgcaggtggg ctacaagatc gactggatga aggggctgca
     3181 gctgaccgct ggcctgaaca acgtgttcga caaggatccg ccgatctgcc tgtcgtgttc
     3241 gttgaacggc tacgacgcct cgacctacga catcccgcgt ggccgctact ggtacctgcg
     3301 cgcggacctg cgtttctgac ctcgggatgc cgcgccggga ccctcccggt gcggcgctcg
     3361 acgttacgga atgcacggcg ccgggttgcc ccggcgccgt ttgcatcaga acgaccaggt
     3421 aaaggtcagc gagccgttgc ggccatcacc gaaggcgccg taaccattga tctgcgacag
     3481 gtatttcttg tccagcaggt tgttgaggtt ggcctgcacg ctgaactccg gcgagatgcg
     3541 gtagcgcacg aaggcgctga ccagcgcata gccgctctgc tcgatgcggc cataggccgg
     3601 caccgtgtag tagatgcggt tctgccagtt ggcgccgccg ccgacggtca gttcctgcag
     3661 cgactgcggg gtgtagctgg tgaacagctt caacgcggtc tgcggcaggt tggtgttgat
     3721 gtcgctgccg ttgatgtcct tggccacgta gcgtgatgcg ccgaaggtgg cattccagcc
     3781 cggtgccagc tcgccgttca cttcgaactc gaagccgcgg ctgacggtgc cacgcgcggc
     3841 aatcgaagcg agttcacccg gccggccgat gatcggttca ttggtggcct gggcgacgtt
     3901 gtcctgctcg atgcggaaga ccgccagcga ggcattcagg cgattgtcga accaagcggc
     3961 cttgacgccc acttcgtagc tcttgccatc caccggatcg aggtagcgat cgttgcggtc
     4021 gcgcgcggtc tgtggctgga agatttcggt atagctggtg taggcagacc aggtgtcgtt
     4081 gaggtcgtac accaggccgg cgtagggcgt ggtcaccttg tgttcgcggt catcgttctc
     4141 gccttcgctc ttccagtcgg tgtagcgcgc accgaggatc agcttcagcg ggtcggccag
     4201 cgacaggcgg gtggcgaggt agccggcctt ctgggtgatg gtgccgcggc tggccagcgc
     4261 cagcgggttc cagttgggct ggctgatgtt gccggtccag ttgaagtagc tggcaaacgg
     4321 atcccacagc aggttggcgc cgcccacctg gtagtcgccg tagttggcgt actcacgctt
     4381 gttgtagctc aggccggcca tgaactggtg ttcgcggccg aacaggcgga acggaccatc
     4441 cacgtagcca tcgacggcgt tgaccttgcg ctcggtgttg tagaagccgg ccgacggcga
     4501 gatgccagca ccggtggtct tgttgaagtt ggaggccccg gtgacccagt tgttgtaggc
     4561 cggatagaac agcttgtcgt cggccttggt ctcgtcgtgg gtggcgccga tcttgaactt
     4621 ccagccgttg ctgaaggcat gctgcagcgt ggcgaaggca cgcttgctgg tggtgtccca
     4681 gtaggtccag tccgggctgg cattgaagga ctcgtcatac ggcgtacggc ttccgtccga
     4741 gtacagcatc gggaagccgc cccaggtggc gccattggca cgcttctgct ggtagtcgta
     4801 gcccacgctc agctgggtgt ccggggtcag gtcggcatcg atgaccgcgt agcccagcgt
     4861 cttgcgctgg ttgtagcggt ccatctggcc gtcggtatcc aggtagctgc cgatgacgcg
     4921 gccacgcacg gtaccgctgg cattgagcgc gctgcccacg tccacggtgg tgcgggtgcg
     4981 gccccagctg cccacgttca ccgagacgct gccggtcagt tcggcgctgt cggcatgctt
     5041 gcggatcagg ttcaccgatg ccgacggatt accggcacca ctgagcaggc cggtggcacc
     5101 gcgcaccact tccacgcggt cgtacagggc cagatcgagg ccggaatcac cgtagctcca
     5161 gttctgcacc atctgcgtcg gcaggccatc gaactggtag gcatcgatat agaacccacg
     5221 cgcgtagaac tcggtgcgct cgctgtcgga ctgggtgctg gtcacgccgg tggtgttggc
     5281 cagcacgtcg atgatgtcgt ccagcttctg gtcttcgatg cgctggtggc tgatgatgct
     5341 gatcgactgc gggatctcgc gcggtgccag gtcgaaacgg gtaccggcgg aggtgcggcg
     5401 caccgaatag ccttcggcac gctcaccctt gaccacgacc ttgtcgaggg tggtcgggtc
     5461 ggctgcggtg tcggcaaagg cggccggggc gatggccagg ctgagggcgg acagcaccgc
     5521 cgcggacagg cgatggggca gaacggggga ggtcgaacgg atcattgggg ttcctggacg
     5581 ggcacgtgcg tgcgtccgac cggcttcccg gatggtctgg cgccgcggct ggtggggatc
     5641 tcacgccgct ggcggaaccc tgcgttcagg gcggtggctg ggcaatgcga gcacggacga
     5701 accgtcctgg ccgtccgcaa aacgcaaata tcgtaatggg aattgttttc gtttacaaat
     5761 gggcgagggc ggtgcgtatg ctgtcgcggc cgatctagtc ctgcggcggc aggcgttcgg
     5821 cctggatgtt catgcgcggc cgttccccct cgatgccgac ggcgtattcg acggtgatta
     5881 ctacgtccgc ctcgagtccg cgcacatcca gggattgcac cttcccggtc acgtattccg
     5941 ggaacagccg ttccgagccg gcgtagttcg tcccgggggc caggcaggcc agggtgcgct
     6001 ggatgttgat cgtggcgaat tcggtggacg tattgggcag cagccaatcg cagaactgcc
     6061 tgcccgcaag ggtgccgcca tgcgtgcagt gcttgctgaa gctgctccag tcgctgacca
     6121 gttcaatcgc cggctgggtg ccgatcgagg cgctgttggc gaaggcaaga agatgtgcac
     6181 acaacgggtc gcggcgtgcc tgcacggtgc tgcagctggt ggccagcagc gccagggtga
     6241 cgaacggcgc gatggtgcga aggcgggtca tcggtgtgct ttccctgtca ctgcggtcga
     6301 tgatgcgtct ggccgggcgt ggcgtcgagc ctggtcggcc aaggggtcag cgcagcagcg
     6361 gcagcgggtc gcgcgcgccc tgggaaccgt agatgcccca gtgcaggtgc ggcggcgtgc
     6421 ccttggcgtt gccgctgtcg ccgacatggc cgagcaggtc gccgggccgg accacctggc
     6481 cgcgtgccag accgtcggcc cagctttcca gatgcgcgta gtagtagcgt tcccgtcccg
     6541 gcccgatcac ccagacctgg cggccgccaa gcccgcgttc gctgacatcg gcgacgacgc
     6601 cgggcgtggc gctgcgcacc ggcgtaccgc gcctggcgaa gatgtcgatg ccggcgtggg
     6661 aacgatcacg accccgtggc gcgccgaacg tatcggcgat ctgccttggg cgcacgccct
     6721 ccaccggcac cggcagctcg gtggcggcgg gcatccgcgc gagtgtccac aacatcttcg
     6781 gtgcggccgc ccacgggctg ttccacagtg cgacccccgc aaccacggcg atggccagcc
     6841 acaggccgcg cagcaaccag cggcgcagtc gacgggccgg ggaattcagt atgctcatgt
     6901 ctgcagaatg ttgggtcgag tcgtgctcga cggctgttgc tttgcggtca aaggggagtc
     6961 gtcaaagggc agtcgagcaa gctcgactct acaggggcgg tagcagcggc acttcgaaac
     7021 tccgcttcag cgtccccagt gccaccgagg tccggaaccg ctcgatgttg tcatcaccgc
     7081 cgaacaggcg ctcggtgatc gcctcgtatt cttccatcga cgccgctgaa agcagcagca
     7141 ggaagtcgcc gtcgccggtg atcgagtagc actgctgcac cgccgggtcg tcctgcacgc
     7201 ggcgcttgaa cggcgccacg cgctcgcgct gctcgctgac cacgcgcacc tcgacgatga
     7261 tggtcagtgg tcgcccgacc ttggctgcgg cgaccaccgc cacgttggcc gcgatcacgc
     7321 cgctgtcctg caggcgcttg atccggcgtt gcacggccgg ggtggacagg tgcacagcct
     7381 cggcgatttc gcgctgcggc agggtgttgt cccgctgcag caggtcgagg atggcgcggt
     7441 cgaaactgtc gagcacgggg gcgatggcca tggcgagcag aaattgcacg aacgggctgt
     7501 caattgagcc aagtgctcgg cgtgggcgca atagactttg cccatgcaga cctcacgatt
     7561 cgcgccgatg ttgccggcgc tggcggtgct gggctcggtc acctcgctgg ccatcggcac
     7621 ctcctacgca aaacacctgt ttccgctgat cggcgcccag ggcaccagcg cgctgcgcgt
     7681 gggcttctcg gcgctgttgc tgctgctgtt ctggcggccg tggcgctgga aaaccagccg
     7741 cgtggatgcg atcaccatcc tgcgctacgg gctcaccctg ggcctgatga acctgctgtt
     7801 ctacatggcc ctgcgcacga ttcccttcgg catcgcggtg gccattgaat tcaccgggcc
     7861 gttgacggtg gcgatgctgt catcacgacg accgatcgac tttgtctggg taggctgcgc
     7921 ggtggtgggg ttgttgctgc tgctgccgtt ggggggcggc ccggcgctgg acccggccgg
     7981 tgtgctgtat gcaatgggtg cggcggcgtg ctggggcctg tacatcgtgt tcggcaagcg
     8041 cgccggccac ctgcacgccg ggcattcggt gtcgctgggg ctgctggcgg cgtcgctggt
     8101 ggtggtgccg gtgggcgtgg tgcatgccgg tgcggcgctg ctcgatccga agatcctggc
     8161 ggcggggctg ctggtggcgc tggtatccag tgcgatcccg atgtcgctgg agatgatggc
     8221 gctcaagcgc ctgcccaagg agaccttcgg catcctgatc agcatggaac cggcggtggc
     8281 cgcgctgtgg gcgatgctgc tgctgcacga gcacctgcac gggctgcagt ggctggcgat
     8341 cggctgcacc gtgctggcct cggtgggcag cacgatgacc gcgcgaaggc tgaaggtgcc
     8401 ggtcaccgca tgaaaaaagg gacggagggg attaagtcgt ttgtgccaca aacgacttaa
     8461 tcccctccgt cccctttttc agcgcagggc gtcggccggg acgtcgatcg ccatcgccag
     8521 ggcgaggtgg tcggagaacg cggccggtac ggcttccacg gtgcgggtct gcagcccgct
     8581 gctgaccagg atgtggtcga tggcgcggtc ggggcgccag ctggggaagg tcggcacgat
     8641 gcagccgggc ggctgcagcc gggtcttctg gtatagcacc tgcatttccg gccgttcggc
     8701 caggcagttg aaatcgccca tcagcaccgc gttggggtgg tcggacagca gttcggcgat
     8761 gaagcccagc tgcgacatcc gcgagcccgc gccgagtgac agatgcgcca ctgccacggc
     8821 caagccatcg gcaccgtcgc cgaacttggc cagcagcacg ccgcgcccgc cgatgcggcc
     8881 gggcagggcg tggtcctgca cttccaccgg ttccagcttg ctcagcaacc cgttggcgct
     8941 ggaggcgacc ccgcccatgc gccggttcgg ctggtggctc cagtaattga agccggcgcg
     9001 ctgggccagg taatgggtct ggttggtgaa gcccgagcgc aggctgcccg ggtcggcctc
     9061 ctgcaggccg acgatgtcat gttcgcgcgc caaggtggca atcgcgtcaa ggctgctgcg
     9121 cttgcgaccc gccggcagcg catgtgacca gctgcgggtc acatagtcgc tgtagcggcg
     9181 ggtacttgag ccggcctgga tgttggccgt cagcaagcgc agggtccgtg tacgggggga
     9241 attcacggcc ggggaaaacg tctcttggat cagtgagcct gggccgcacc gcgttcgcgg
     9301 gcgatcaggt ggtcggcaat gcgcagcatg tccgggaagc tcttgccctt caccaggtac
     9361 ttgccattga cgatgatcga cggcgtgccg ctgatctggc tgcgctgggc gaactgcttg
     9421 gccgagttgg tcttggcgtt caccgcgaag ctgcccatgg tggcggcgaa ctgcttcgga
     9481 tccacgccat aggcgccgta gaacttggcg atgtcgtcca ccgagtcacg gccgcgctcg
     9541 cccttcaggg tcttctgcga gtggatggcg gcgtacagcg cttcgtgggt cttctcctgc
     9601 acgcccaggg tctgcgcggc gtagaaggca cgggcgtagt catcccaggt gccgccgaac
     9661 atggccggca cgtagacgaa gttcacgtcg ctcggcaggc cggccttcca cgggccgacc
     9721 agcggctgga acgcggcaca ggccgggcag acgtagccga agatctcggt cacttcgatc
     9781 ttgccggcgg ccggctggaa cggctggccg ttcgggatga cctggtaatc ggcgccttcc
     9841 accggggccg ggccggtcag cgcggcggtg gtcggggccg gagcggccgc cggagcggct
     9901 tcggccgcag ccttgtcgcc ttcggcagcg gccggggcag cgccctcggc gcccgccgcc
     9961 ggagccgccg gctcggtgct ggccggagcc ggtgccggtt cggccggagc cgcggtggtg
    10021 ttggcgctgc cgtcatcggc cttgcaggcg gccaggatcg gcagcagcgc tgcgagggcg
    10081 agggcggcga aacgggtctt catggaaacg tctccagcat ctggaatggt ggggccggcg
    10141 tcaggcaccg gccagaggga aatgatgaca cgcggcggcg acagcgccgt gtcgatggtg
    10201 ggtgttggtt cagcggccgc gggccgcgcg ggcctgggcg atcagtgccg aggcgatgcg
    10261 cagctggtcg tcgaagctgt tgccacgcac caggtactgg ccgttgatga tgatggccgg
    10321 ggtgcccggc accttggtgc gctgggcgaa cgcgcgggcg gcatcgacct tcttctgcac
    10381 ggcctcgccc cgcagcgcct gcaggtaacg gtccggggcc acgccgtagg ctttgtagaa
    10441 gttggcgagc tcatcggccg agatgttctg catcggcagc gcgccgtcct ggtgcagtgc
    10501 cttgaacacg gccgcatggc tgcgcttggc cacgcccact tcgtcagcgg cgtagtaggc
    10561 cagggcccag gcatcccagg cgccgccgaa ggcggccggc accggggtga agcgcacgtc
    10621 ggccggcaac ttggcggccc aggcctccag ctgcggctcg aaatgggcgc agtgcgggca
    10681 ggtgtagccg aagacctcga ccacttcgat ctttcctgcc agcggctgga acgggcccgg
    10741 ctgggcgatg cgctcgtagt ctttgccttc caccagcggt gcgctggcag gggcggcggc
    10801 actggcggcc agcggcagca ggaccagcag ggacaacagc aggcggggaa tcaacctcat
    10861 cgacacgcat ctccgttgaa aaaagcaacg ccggcgcggt cgccggcgtg aaggaaacat
    10921 accgcaggcg ggggccgcgg tggcggcccg ggccgaccag tggtggtcag ggggcggcag
    10981 ccggttgcgt tggcgtggcc gcagcggcca ggtcgtcggc cttgttgtgc aggccctgca
    11041 ggtagctcga cagcgcctgc acctcctgtt cgctcagctt ctgcgcgacc gtggccatga
    11101 tctggaaatg ggtcttgtcg gtctcatggg tctgcccggc ctggtactcc tgcaggcgtc
    11161 gcgcgacata actggcgtgc tggccaccga gatgcggata ggcgggcccc ggattgccgg
    11221 cgccgctggg gccatggcag gccatgcagg ccggcaggcc gcgcttggcg tcgccaccgc
    11281 ggtacagctg ctggccgatc tcgtagaact tcatgccctt gtaagggccg tcggtgactg
    11341 cggtgtcatc ggcgatgccg gccgtggcct tctgggtggc gaagtaggcg ccgatgtcgc
    11401 gcatgtcctg cggtgtaagg ttctgcacga acggcaccat cgccaccgcc gcgccggaac
    11461 tgcgctggcc attggcaatc agggccatct gctgggccac gtagcgttcg ctctggccgg
    11521 cgatggacgg gtacatctcc accgtggcgt tgccgtcggc gccgtggcag gccgcgcagg
    11581 ccgaggcctt ggcctggcca gccttggcat cgccccagtg ggtcttgctg aaatccacct
    11641 ccagcgaggc ggtgttgatc ggcccgttgt cgggcagcgg ggtcaacgtg gtctgcgcga
    11701 acgcagcggc ggcaacgact acggcagtgg caagggcgga tacggcaaga acgcgagcgt
    11761 ggcgcatgct aaagctccgt atggaccggg ccgggcggtg gccgccggca tcgcccggat
    11821 tatcaacggc gtttccgcgc acggtcaacg cagcagtgca gcaaaatgcc cgcaacggcc
    11881 gccggcacgg gcgcgcggcg ccgcaacatg cgatcctagg cacatgtcat tgctcatcga
    11941 acgcgcccgt taccacctct cggcccacaa cgtgcggcag ctgccgcccg atgagggcgc
    12001 cgaagtggcc ttcgccggcc gctccaacgc cggcaagtcc agcgccctca acgcgctgac
    12061 ccgccagaac gccctggccc gcgtgtccaa gacccccggc cgcacccagc agctggtgtt
    12121 cttccagatc accccggacg cacacctggt cgacctgccc ggttacggct acgccaaggt
    12181 gccgctggac ctgcaggcgc actggcaggc cttcatcgac cggtacttcc gcacccgcga
    12241 agccctgaag ggcctggtgg tggtgatgga catccgtcac ccgctgaagg attacgaccg
    12301 gcagatgctg tcctacgcgg tgcagcgcgg catgccggcg cacgcactgc tgaccaaggc
    12361 cgacaagctc agccgcagcc agcagatgca gaccctgcag aaggtgcgca aggagctgca
    12421 ctcggcctac ggcgacagcg tcagcgtgca ggtgttctcc ggcgaggacc gtaccggcgt
    12481 ggatgaggcc cgcgccgtga tcggcggctg gctggggctg gaataagc
//
LOCUS       DAOKIP010000115        12459 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.115,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000115 DAOKIP010000000
VERSION     DAOKIP010000115.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 12459)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12459)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12459
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.115"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(20..346)
                     /locus_tag="QEL58_002600"
     CDS             complement(20..346)
                     /locus_tag="QEL58_002600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004147332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EF-hand domain-containing protein"
                     /protein_id="HDS1677054.1"
                     /translation="MILRGKFSPRRKALLALVLIVLAWLGYAWYANIAITQGIEQKDM
                     DWNGDGTVSRDEIIESFYAVAVNDSQDGNRHCRTFVWRSTGEQIRVDCRTEFTPAEAK
                     PAEAKK"
     gene            complement(343..1614)
                     /gene="murA"
                     /locus_tag="QEL58_002601"
     CDS             complement(343..1614)
                     /gene="murA"
                     /locus_tag="QEL58_002601"
                     /EC_number="2.5.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014036247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HDS1677055.1"
                     /translation="MAKIVVTGGAALHGEVSISGAKNAVLPILCATLLADEPVEITNV
                     PHLHDVVTTVKLLGELGAKVTIDQGTLSRGSAIVVDPRPVNQHVAPYELVKTMRASIL
                     VLGPLLARFGAAEVSLPGGCAIGSRPVDQHIKGLQALGAEIVVENGFIKASAKRLKGG
                     HFTFDMVSVTGTENVLMGAVLAEGTTILDNCAMEPEVTDLAHCLIALGAKIEGLGTAR
                     LVIEGVERLSGGRHEVLPDRIETGTFLVAAAMTGGKVTVNRARPNTMDAVLSKLVEAG
                     AKIETTDDSITLDMQGKRPKAVNLTTAPYPAFPTDMQAQFMALNCVADGVGVINETIF
                     ENRFMHVNELLRLGADIQVEGHTAIARGHERLSGAPVMATDLRASASLILAGLMADGE
                     TTIDRIYHLDRGYENIEEKLSSLGATIRRVP"
     gene            complement(1636..1866)
                     /locus_tag="QEL58_002602"
     CDS             complement(1636..1866)
                     /locus_tag="QEL58_002602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BolA family transcriptional regulator"
                     /protein_id="HDS1677056.1"
                     /translation="MDADTIRNLIETGLPGARADVRGDDGVHFEATVVCEAFAGKMPL
                     ARHRMVYATLGDLMGGAIHALALKTVTPAEAG"
     gene            1921..2922
                     /locus_tag="QEL58_002603"
     CDS             1921..2922
                     /locus_tag="QEL58_002603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005993233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KpsF/GutQ family sugar-phosphate isomerase"
                     /protein_id="HDS1677057.1"
                     /translation="MAEPLLPSRSVDPASLVASGRRVFDIEQQALNAVAARLGEAFQQ
                     ACQAILSSHGRVVATGMGKSGHIARKIAATLASTGTPAFYVHPGEAGHGDLGMITEDD
                     VVLALSYSGESDEVLMLLPVLKRQGNLLISMTGRPQSSLAAAADIHLDVSVPAEACPL
                     DLAPTSSTTASLAMGDALAVALLDARGFTADDFARSHPAGSLGRRLLLHITDVMHTGD
                     DLPTVGAGASLSEALMEMSRKRLGMTAVVDADGVLIGLFTDGDLRRALDSALDVRTAK
                     IADVMTRNPRTIGADQLAVEAARLMETHKITGLIVVDGQGRAVGALNIHDLLRARVV"
     gene            2988..3536
                     /locus_tag="QEL58_002604"
     CDS             2988..3536
                     /locus_tag="QEL58_002604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011407889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD hydrolase family protein"
                     /protein_id="HDS1677058.1"
                     /translation="MPWSPLPAFPAHLHAAAARIRLACFDVDGTLTDGRLYYDKDGNE
                     SKAYFVQDGLGLKLLQQHGIHPVLITARNSQSALRRGADLGIDTQIAVGDKLASVQAL
                     CAQHGIGLEQVAFMGDDLPDLAPLGAVGLAVAPANAHPWIAERVHWQTRAEGGRGAAR
                     ELCDVLLAAQGHVDAVLARFSA"
     gene            3533..4108
                     /gene="lptC"
                     /locus_tag="QEL58_002605"
     CDS             3533..4108
                     /gene="lptC"
                     /locus_tag="QEL58_002605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010483644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter periplasmic protein
                     LptC"
                     /protein_id="HDS1677059.1"
                     /translation="MNRPTLNWRTVLGIGLLLAALLSSWAALRNRDKGPANGGNEVGV
                     DYILHDFTIVALDEQGKESTTLRAPLLERQRGDQTISIATPLFEMPDKDGKHWTLRSE
                     TGWLSAKGDEMKLRGNVAGDSPAGPGVPPTTFRTDHLDVFPKESRARTDALVTMTRPG
                     MEQSGVGFEVDSKNNTYHFLSQSKGRYTPRH"
     gene            4208..4735
                     /gene="lptA"
                     /locus_tag="QEL58_002606"
     CDS             4208..4735
                     /gene="lptA"
                     /locus_tag="QEL58_002606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005408392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide transport periplasmic protein
                     LptA"
                     /protein_id="HDS1677060.1"
                     /translation="MKIPFAAVLALALVVPSAAFAKSTDRNENMNIESGAQSGVLTGD
                     GKTVLSQGVTITQGTLDIRSSEAEIYLKDGEAVRAVFTGKQATMKQQLDDGTWMDAVA
                     DRIDYDIKTEIITLTGNYKVTSARGTNAGQRMVYNTRSGEMNSGGDGSRVRTVIPPKN
                     KNPAAQPAKPAGSKK"
     gene            4735..5454
                     /gene="lptB"
                     /locus_tag="QEL58_002607"
     CDS             4735..5454
                     /gene="lptB"
                     /locus_tag="QEL58_002607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005913374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter ATP-binding protein"
                     /protein_id="HDS1677061.1"
                     /translation="MLVAKGLRKRYKQREVVKDFGLTLDAGEVVGLLGPNGAGKTTCF
                     YMIVGLVAADAGSIVLDGRDITGDPMYTRAKQGVGYLPQEPSVFRKLTVADNIRLVLE
                     LREDLDSAGRERELSSLLDELQLGHVADQLGASLSGGERRRCEIARALAAQPRLILLD
                     EPFAGVDPISVGEIQRIVTHLKQRGIGVLITDHNVRETLGICDRAYILAEGAVLAQGS
                     PEAILDNADVRRVYLGDSFKL"
     gene            5495..6916
                     /locus_tag="QEL58_002608"
     CDS             5495..6916
                     /locus_tag="QEL58_002608"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010376907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase factor sigma-54"
                     /protein_id="HDS1677062.1"
                     /translation="MKTRLQTSLGQQLVLTPQLQQAIKLLQMSTTELELEIAQAVESN
                     PLLDWADSNDNGATSEGGDGSDGDTAAEPTGNGDDWAPAELDWSAAGSGGSFDDDDDT
                     GSAAERVAETETLADHLLWQLHLSHLSARDRSIGATLIDALDEDGYLRESLATIAETL
                     LPATHADEDEILAVLHRIQRFDPVGVAARTLGECLQLQLDVLPADTPGLALARQIAAG
                     PLERLPRSGVAGLAHELKQAPADVETAVNLLRSLDPRPGTQIAPLSQDTYVVPDVVVW
                     RQNGVWRAALAGHAGPKVVIHRGYEQLIRRCGEADAGYLRAQLQEARWLLKGLQQRGE
                     TLLRVVRSLILQQAGFLEFGEQALRPLTLREIATELGLHESTVSRAIARKHVRTPRGT
                     LPLRAFFASGIDTEGGGEASSTAIQAMIRRLIDDENPRKPLSDAKLADLLKSSGIPVA
                     RRTVAKYREAMNISASHERVRIA"
     gene            6975..7292
                     /gene="raiA"
                     /locus_tag="QEL58_002609"
     CDS             6975..7292
                     /gene="raiA"
                     /locus_tag="QEL58_002609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005415556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-associated translation inhibitor RaiA"
                     /protein_id="HDS1677063.1"
                     /translation="MRIETFGKDVEVTPALQSYVEEKLARIGKHFDQHCEARVTLKLQ
                     KTEHHVDASLNIPGQTLHAEAGGQTMYAAIDLLADKLDRLVIKHKEKKQQHAPLPVGD
                     NGG"
     gene            7314..7766
                     /locus_tag="QEL58_002610"
     CDS             7314..7766
                     /locus_tag="QEL58_002610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010483653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HDS1677064.1"
                     /translation="MPLTDLLAAVQTQLCTATDRDSVLQAAAGLLACRQANAEQIYLN
                     LCQREALGSTAIGHGIAIPHGRAPTLDRPRGALLRLATPVDFGGDEPVDLVFAMAVPA
                     HYTHQHLMLLSELAELFSAPDIRQALRAAGDARALRQALELTPPASAA"
     gene            7763..8713
                     /locus_tag="QEL58_002611"
     CDS             7763..8713
                     /locus_tag="QEL58_002611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004425835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HPr kinase/phosphorylase"
                     /protein_id="HDS1677065.1"
                     /translation="MNTSITARELFEQQRERLGLRWAAGKSGEKRELEAGNTVSRRPS
                     LAGYLNAIYPNKVQILGTEELSWLDALEPRQRWETIEKIMQSHPLALVLTRNQPCPED
                     LRAAADESGTPLWLSPKRGHELLNHLSYHLARTLAPRVILHGVFMEIYSIGVLITGEA
                     GSGKSELALELLSRGHRLVADDAPEFTQIAPDVLDGTCPELLQDLLEVRGLGVLNVRE
                     MFGDTAVKKNKYLRLIVHLTKPMTEPTPHGYERLTGDSGTRHVLDLDVPLITLPVMPG
                     RNLAVLTEAATRLHILRTKGIDPAAMFIARHSNLLERRTP"
     gene            8739..9623
                     /gene="rapZ"
                     /locus_tag="QEL58_002612"
     CDS             8739..9623
                     /gene="rapZ"
                     /locus_tag="QEL58_002612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012479342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNase adapter RapZ"
                     /protein_id="HDS1677066.1"
                     /translation="MSTAAPTAPTLIIVSGLSGSGKSVALKTFEDQDYYCSDNLPINL
                     LPDFVRSLLANHDGHAPRRLAVGIDVRGQADLGQLGDWRQLATDAGVEVKVLFFEASD
                     ETVLKRYADTRRRHPLSQLGLSLPEAIARERVLTAPLRREADAVIDTSALNVHQLRRR
                     IITEFTLDHATRLSLLFESFAYKRGVPAEADFVFDARVLPNPHWDPELRALSGREPGV
                     RDYLEAQPDVQRYLAQLMDFLDTWLPKLGDGTRSYVTVAFGCTGGKHRSVFLAERMAR
                     HAREMGWEDVATYHREQD"
     gene            10047..10439
                     /locus_tag="QEL58_002613"
     CDS             10047..10439
                     /locus_tag="QEL58_002613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017154797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS fructose IIA subunit family protein"
                     /protein_id="HDS1677067.1"
                     /translation="MTCGILLVTHPGVGTALLEVATRLLRQLPLKTEAFEVPFDADLD
                     ALLPLASAALRRVDGGEGVLILTDLYGASPANLAGQLARLGTPVRRVSALSLPMLLRV
                     MNYPEQGLDQLPATAAAGTRNGAIVDDA"
     gene            10432..10701
                     /locus_tag="QEL58_002614"
     CDS             10432..10701
                     /locus_tag="QEL58_002614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019237443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HPr family phosphocarrier protein"
                     /protein_id="HDS1677068.1"
                     /translation="MLERELTVSNRLGLHARATAKLVQTLAPFRCNVTMAAKGREINA
                     KSIMGVMLLAAGQGTPVTVRINGEDEAAAMEAVVSLFERRFDEDS"
     gene            10704..>12459
                     /gene="ptsP"
                     /locus_tag="QEL58_002615"
     CDS             10704..>12459
                     /gene="ptsP"
                     /locus_tag="QEL58_002615"
                     /EC_number="2.7.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005408384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate--protein phosphotransferase"
                     /protein_id="HDS1677069.1"
                     /translation="MPRARAGQLPSGQRPVQLLAGHGAARGTAMGRARVRLPHALEVA
                     EQRVAAHQVEAELARLHHAVDAARTEMHELRQRLHGALNQEVGEFLDLHALLLDDPEL
                     LYGLDELIRSGPYSAGYALRLQRDRLARVFDGMDDAYLKSRMDDLDHVIGRIHAFLQP
                     ERPPAMKGLAGEILVCDNIAPSELAQLQAQGVVGIVTAAGSALSHSAILARSLHLPLI
                     VNVPQLLSRIADGDVLIIDGADGSITVNPQADNLRDYRARLKEHAREQRELGRLRSKP
                     SRTRDQVDIALLANAESLEDVTQAHALGAQGLGLYRTEFLFLQRNELPDEEEQFQTYR
                     DAALGMSGRPVTIRTLDLGADKADRTGLTLSNEENPALGLRGVRLSLARPKVADTQLR
                     AILRASAYGKLRVLVPMVSTREELLAVRRRMLKLTEQLRGEGHMVSDHVPLGAMIEVP
                     AAALALESFIDLVDFLSIGTNDLVQYLLAADRNNEALGELYSPLHPAVLRLLQMVIDT
                     GARHRIPVAVCGEMAGDARMTPLLLALGLSEFSLHPGTLLEVRRAIREADLGALRARA
                     TKLLAARDRRGIERWLALV"
BASE COUNT         2094 a         4372 c         4075 g         1918 t
ORIGIN      
        1 cgctttcgcg ggcgttttct tatttcttcg cttcggccgg cttcgcttcc gctggcgtga
       61 actcggtgcg gcagtccacg cggatctgct cgcccgtgct gcgccagacg aaggtgcggc
      121 aatggcggtt gccatcctgg ctgtcgttca ccgcaaccgc gtagaacgac tcgatgatct
      181 cgtcacgcga gacggtgcca tcgccgttcc agtccatgtc cttctgctcg atgccctggg
      241 tgatggcgat gttggcgtac caggcgtagc ccagccacgc cagcacgatc agcaccagcg
      301 ccagcagcgc cttgcgacgc gggctgaact tgccgcgcag gatcatggca cgcgccggat
      361 ggtggcaccg agcgaagaca gcttctcttc gatgttctcg tagccacgat caaggtggta
      421 gatgcggtcg atggtggtct cgccgtccgc catcaggccg gccaggatca acgacgccga
      481 cgcgcgcagg tcggtggcca tcaccggcgc accgctcagg cgttcgtggc cacgggcaat
      541 ggccgtgtgg ccttcgacct ggatgtccgc gcccagccgc agcagttcgt tgacgtgcat
      601 gaaacggttc tcgaagatcg tttcattgat cacgcccacg ccatcggcca cgcagttgag
      661 cgccatgaac tgcgcctgca tgtcggtcgg gaacgccggg tacggcgcgg tggtcaggtt
      721 gaccgccttc ggccgcttgc cctgcatgtc cagggtgatg ctgtcgtcgg tggtctcgat
      781 cttcgcaccg gcctcgacca gcttggacag caccgcgtcc atggtgttcg ggcgcgcgcg
      841 gttcacggtg accttgccac cggtcatcgc cgcggccacc aggaaggtac cggtctcgat
      901 gcggtcgggc agcacttcgt ggcggccccc ggacaggcgc tcgacacctt cgatgaccag
      961 gcgggcggtg cccaggcctt cgatcttcgc gcccagcgcg atcaggcagt gcgccagatc
     1021 ggtcacttcc ggttccatcg cgcagttgtc gaggatggtg gtgccttcgg ccagcaccgc
     1081 gcccatcagc acgttctcgg tgccggtgac gctgaccatg tcgaaggtga aatgaccgcc
     1141 cttcaggcgc ttggccgagg ccttgatgaa gccgttctcg accacgatct cggcacccag
     1201 cgcctgcagg cccttgatgt gctggtcgac cgggcgcgaa ccgatcgcgc agccgcccgg
     1261 cagcgacact tcggccgcgc cgaagcgggc cagcagcggg cccagcacca ggatcgaggc
     1321 gcgcatggtc ttgaccagct cgtacggcgc cacatgctgg ttcacaggac gcggatcgac
     1381 cacgatcgcg ctgccgcgcg acagcgtgcc ctggtcgatg gtgaccttgg cgcccagttc
     1441 acccagcagt ttcaccgtgg tgaccacgtc gtgcaggtgc ggcacattgg tgatctccac
     1501 cggctcatcg gccagcaggg tcgcgcagag aatggggagg acggcgttct tggcgccgga
     1561 gatgcttact tcaccgtgca gcgcagcgcc gccggtcaca acgatcttgg ccatgtattc
     1621 gggatcttct gcggttcagc cggcttcggc cggggtcacg gttttcagcg ccagtgcgtg
     1681 gatcgcaccg cccatcaggt cgcccagggt ggcatagacc atccggtggc gggccagcgg
     1741 catcttgccg gcaaaggcct cgcagaccac ggtcgcttcg aaatgcacgc catcgtcgcc
     1801 acgcacgtcg gcgcgggcgc cgggcaggcc ggtttcgatc agattgcgga tggtgtcggc
     1861 gtccaacggg ctttcctaat aaaatgatcg ctcattctac ttccgctgcg tggcgtccgc
     1921 atggccgagc ccctcctgcc ctcccgttcc gtcgacccgg ccagcctggt cgccagcggc
     1981 cgccgtgtct tcgacatcga gcagcaggcc ctgaatgcgg tcgctgcccg cctcggcgaa
     2041 gcgttccagc aggcctgcca ggccatcctg tccagccacg ggcgggtggt tgccaccggc
     2101 atgggcaagt ccggccacat cgcccgcaag atcgccgcca ccctggcctc caccggcacc
     2161 ccggcgttct acgtgcaccc gggcgaggcc ggccatggcg atctgggcat gatcaccgag
     2221 gacgacgtgg tgctggcgct gtcctattcg ggcgagtcgg acgaagtcct gatgctgctg
     2281 ccggtgctca agcgccaggg caacctgctg atttccatga ccggacgccc gcagtccagc
     2341 ctggccgccg ccgccgacat tcacctggat gtcagcgtgc cggccgaagc ctgcccgctg
     2401 gacctggccc cgacctccag caccaccgcg tcgctggcaa tgggcgatgc gctggccgtg
     2461 gccctgctcg atgcgcgcgg cttcaccgcc gacgatttcg cccgttcaca cccggccggc
     2521 agcctcggcc gccgcctgct gctgcacatc accgatgtca tgcacaccgg cgacgacctg
     2581 cccacggtcg gtgccggcgc cagcctcagc gaagcgctga tggaaatgag ccgcaaacgg
     2641 ctgggcatga ccgccgtggt cgatgccgac ggcgtcctga tcggcctgtt caccgacggc
     2701 gacctgcgcc gcgcgctgga cagcgcgctg gacgtgcgta ccgcgaagat cgccgatgtg
     2761 atgacccgca acccacgtac catcggcgcc gaccagctgg ccgtcgaagc cgcgcggttg
     2821 atggagaccc acaagatcac cggcctgatc gtggtcgatg gccagggccg cgcggtcggt
     2881 gccctgaaca ttcatgacct gttgcgggcg cgggtggttt aaccgacagt ccgtagaccc
     2941 cattcagtct gtatcgtcca tccgcccaca ccgagcctgc cgccctgatg ccctggtccc
     3001 cgctgcccgc ttttcccgcc catctgcatg ccgccgcggc ccgtatccgc ctggcgtgct
     3061 tcgatgtgga cggcaccctc accgacggtc ggctgtacta cgacaaggac ggcaatgaga
     3121 gcaaggcgta cttcgtgcag gatggcctgg gcctgaaact gctgcagcag cacggcatcc
     3181 atcccgtgct gatcaccgcg cgcaacagcc agtccgcgct gcgccgtggc gccgatctcg
     3241 gcatcgacac ccaaatcgcc gtcggcgaca agctggccag cgtgcaggcg ctgtgcgcgc
     3301 agcacggcat cggcctggaa caggtggcct tcatgggtga cgacctgccg gacctggcac
     3361 cactgggcgc ggtgggcctg gccgtggccc ctgccaacgc gcacccgtgg atcgccgagc
     3421 gcgtgcactg gcagacccgc gccgagggcg ggcgtggcgc cgcacgtgag ctgtgcgacg
     3481 tcctgctggc cgcccagggc cacgtggacg ccgtcctggc gaggttcagc gcatgaaccg
     3541 gccgaccctg aactggcgca ccgtgctcgg catcggcctg ctgctggccg cgctgctcag
     3601 cagctgggcc gcgctgcgca accgcgacaa ggggccggcc aacggcggca acgaggtcgg
     3661 cgtggactac atcctgcacg acttcacgat cgtggccctg gacgagcagg gcaaggaatc
     3721 gaccaccctg cgcgcaccgc tgcttgagcg ccagcgcggt gaccagacca tcagcatcgc
     3781 gaccccgctg ttcgaaatgc ccgacaagga cggcaagcac tggacgctgc ggtcggagac
     3841 cggctggctc agcgccaagg gcgacgaaat gaagctgcgt ggcaacgtcg caggcgacag
     3901 tcccgccggc ccgggcgtgc cgcccaccac cttccgcacc gaccacctgg acgtgtttcc
     3961 gaaggaaagc cgtgcccgca ccgacgcgct ggtgaccatg acccgccccg gaatggaaca
     4021 gtccggcgtc ggcttcgagg tggattcgaa gaacaacacg tatcatttcc tcagccagtc
     4081 caagggccgc tacacgcccc ggcactgatc ccgccgccag cctgcgacgt ccccggacag
     4141 gcgcaaggcc ggcagcccct ccccgccccc ggtttccggg agccctccac cggtagaacg
     4201 gaccccgatg aagattccct ttgcagccgt actcgcgctc gcacttgttg tgcccagcgc
     4261 cgccttcgcc aagtccaccg accgcaacga gaacatgaac atcgagtcag gcgcccagtc
     4321 cggcgtgctc accggtgatg gcaagaccgt gctctcgcag ggcgtgacca tcacccaggg
     4381 aaccctggac atccgctcgt ccgaagccga gatctacctg aaggatggcg aggccgtgcg
     4441 tgcggtcttc accggcaagc aggccaccat gaagcagcag ctcgacgatg gcacctggat
     4501 ggacgcggtg gccgatcgca tcgactacga catcaagacc gagatcatca ccttgaccgg
     4561 caactacaag gtcaccagcg cgcgcggcac caacgccggc cagcgcatgg tctacaacac
     4621 ccgcagcggt gagatgaact ccggtggcga cggcagccgc gtgcgcaccg tcattccgcc
     4681 gaagaacaag aacccggccg cacagccggc caagcctgcc gggagcaaga agtaatgctt
     4741 gtcgccaagg gcctgcgcaa acgctacaag cagcgtgaag tcgtcaagga cttcgggctg
     4801 accctcgatg ccggtgaagt ggtcggcctg ctgggcccca acggtgccgg caagaccacc
     4861 tgcttctaca tgatcgtcgg cctggtcgcg gccgatgcgg gcagcatcgt gctcgacggc
     4921 cgcgacatca ccggcgaccc gatgtacacc cgcgccaagc agggcgtggg ctatctgccg
     4981 caggaaccct cggtgttccg caagctgacc gtggccgaca acatccgcct ggtgctggaa
     5041 ctgcgcgagg acctggattc ggccggccgc gaacgcgaac tgagcagcct gctcgacgaa
     5101 ctgcagctgg gccacgttgc cgaccagctc ggcgccagcc tgtccggtgg cgaacgccgt
     5161 cggtgcgaga tcgcccgtgc actggccgcg cagccgcgcc tgatcctgct cgacgagccg
     5221 ttcgccggcg tcgatccgat ttcggtcggc gagatccagc gcatcgtcac ccatctcaag
     5281 cagcgtggca tcggtgtgct gatcaccgac cacaacgtgc gcgagacctt gggaatctgc
     5341 gaccgcgcgt atatcctcgc cgagggtgcc gtactggccc agggctcgcc ggaggcgatc
     5401 ctggacaacg ccgacgtacg ccgcgtctac cttggggatt ccttcaagct gtgacggcag
     5461 gcgccgggtt cccttccttc cgttcggcac aggcatgaag actcggctgc agacatcgtt
     5521 gggacagcaa ctggtgctca cgccccagtt gcagcaggcg atcaagctgc tgcagatgtc
     5581 taccaccgag ctggagcttg agatcgccca ggcagtggag agcaatccgc tgctggactg
     5641 ggccgacagc aacgacaacg gcgccaccag cgaaggtggc gatggaagcg acggcgacac
     5701 cgccgccgaa cccaccggga acggcgacga ctgggcgccg gccgaactgg actggagcgc
     5761 cgccggcagt ggcggcagct tcgacgatga cgacgacacc ggcagcgccg ccgagcgcgt
     5821 ggccgaaacc gaaacgctgg ccgatcacct gctgtggcag ctgcacctgt cgcatctttc
     5881 ggcgcgcgac cgcagcatcg gcgccacgct gatcgatgcg ctcgacgaag acggctacct
     5941 gcgcgagtcg ctggccacca tcgctgagac cctgctgccg gcgacccatg ccgacgagga
     6001 tgagatcctc gcggtgctgc atcgcatcca gcgtttcgat ccggtcggcg tggccgcgcg
     6061 cacgctcggt gaatgcctgc agctgcaact ggacgtgttg cccgccgaca cgccagggct
     6121 ggcgttggcg cgacagattg ccgcaggccc actggaacgg ttgcctcgca gcggcgttgc
     6181 cgggctcgcc catgaactga agcaagcgcc ggccgacgtc gagaccgcag tcaacctgct
     6241 gcgttcgctg gaccctcgtc caggcacgca gattgcgccg ctttcgcagg acacctacgt
     6301 ggtgcccgac gtggtggtgt ggcggcagaa cggcgtctgg cgcgcggcac tggccggcca
     6361 cgccgggccg aaggtggtga tccaccgcgg ctacgaacag ctcatccgcc gctgtggcga
     6421 agccgatgcc ggctatctgc gcgcgcagct gcaggaggca cgctggctgc tgaaagggct
     6481 gcagcagcgc ggcgagaccc tgctgcgggt ggtgcgcagc ctgatcctgc agcaggccgg
     6541 attcctcgaa ttcggcgaac aggcgctgcg cccgctgaca ctgcgcgaga tcgccaccga
     6601 actcggcctg cacgaatcca cggtatcgcg cgcgatcgcg cgcaagcatg tgcgcacgcc
     6661 gcgcggcacc ctgccgctac gcgccttctt cgcgtcgggc atcgataccg agggcggcgg
     6721 cgaggcgtcc agcacggcca tccaggccat gatccggcga ctgatcgacg acgagaaccc
     6781 gcgcaagccg ctttctgacg ccaagctggc tgacctgctc aaatcgtcgg gaattccagt
     6841 agcgcgacgc accgtggcga agtatcgtga agccatgaac atttccgcct cgcacgaaag
     6901 ggtcagaatc gcttgacgcg ccgccgcgcc cggcggagag gttcattggc acatccgaac
     6961 acaggagaaa cccgatgcgc atcgaaacgt ttggcaaaga tgtcgaagtc accccggccc
     7021 tgcagtccta tgtagaggag aagctggccc ggatcggaaa acacttcgac cagcactgcg
     7081 aagcgcgggt gaccctcaag ctgcagaaga ccgagcatca cgtcgacgcc agcctcaaca
     7141 tcccggggca gaccctgcac gccgaggccg gcggccagac catgtatgcc gcgatcgacc
     7201 tgcttgcgga caagcttgac cgccttgtga tcaagcacaa ggagaaaaaa cagcagcacg
     7261 cgccgctgcc ggtgggcgac aatggtggct gatcgccact gttccccgca gacatgcccc
     7321 tgactgacct cctggcggcc gtgcagaccc agctctgcac ggccaccgac cgcgacagcg
     7381 tcctgcaggc cgccgccggg ttgctggcct gccgccaggc caatgccgaa cagatctacc
     7441 tgaacctgtg ccagcgcgaa gcgctgggca gtaccgcgat cggccacggc atcgccattc
     7501 cccacggccg cgcgccgacc ctggaccgcc cccgtggcgc cctgctgcgg ctggctaccc
     7561 cggtcgactt cggtggcgac gagccggtgg acctggtgtt tgcgatggcc gtccccgccc
     7621 actacaccca ccagcacctg atgctgctgt ccgagctggc cgagttgttc tccgcgcccg
     7681 acatccgcca ggcgctgcgc gcggccggcg atgcccgggc cctgcgccag gcccttgagc
     7741 tgacgccacc tgcgagcgcc gcatgaatac cagcatcacc gcccgtgaac tgttcgaaca
     7801 gcagcgcgag cggctggggc tgcgctgggc cgccggcaag tccggcgaga agcgtgaact
     7861 ggaggccggc aatacggtct cgcggcggcc ctcgctggcc ggctacctca atgcgatcta
     7921 ccccaacaag gtgcagattc tcggcaccga ggagctgtcc tggctggacg cgctggaacc
     7981 gcgccagcgc tgggagacca tcgagaagat catgcagtcg cacccgctgg cgctggtgct
     8041 gacccgcaac cagccctgcc cggaagacct gcgcgcggcc gcggacgagt ccggtacgcc
     8101 gctgtggctg tcccccaagc gcggccacga actgctcaac cacctgtcct accatctggc
     8161 gcgcacgctg gcaccacgcg tgatcctgca tggcgtgttc atggagatct actccatcgg
     8221 cgtgctgatc accggtgagg ccgggtcggg caagagcgaa ctggcgctgg agctgctcag
     8281 ccgcggccat cgcctggtgg ccgacgatgc acccgaattc acccagatcg cccccgacgt
     8341 gctcgacggt acctgccccg aactgctgca ggacctgctg gaagtgcgtg ggctgggcgt
     8401 gctgaacgtg cgcgagatgt tcggcgacac ggctgtaaag aagaacaagt accttcggct
     8461 gatcgtccat ctgaccaaac cgatgaccga acccacgcca catggctacg agcgcctgac
     8521 cggcgattcg ggtacccgcc atgtgctgga cctggacgtc ccgctgatca ccctgccggt
     8581 gatgcctggc cgcaacctgg ccgtgctgac cgaggcggcc acccgcctgc atatcctgcg
     8641 caccaagggc atcgatccgg cggcgatgtt catcgcccgc cacagcaatc tgctggaacg
     8701 gcgaacgccc tgacccctgc ctttcgaaga gcccgtccat gagcaccgcc gcccccaccg
     8761 ccccgaccct gatcatcgtc agcggcctgt ccggctcggg taaatccgtg gccctgaaga
     8821 ccttcgagga ccaggactac tactgctcgg acaacctgcc gatcaacctg cttccggatt
     8881 tcgtgcgcag cctgctggcc aaccacgatg gccacgcgcc gcgccggctg gcggtgggca
     8941 tcgacgtgcg cggccaggcc gatcttggcc agctgggcga ctggcggcag ctggccaccg
     9001 acgccggcgt ggaagtgaag gtactgttct tcgaggccag cgacgaaacg gtgctcaagc
     9061 gctatgccga cacccgtcgc cggcatccgc tgagccagtt gggcctgtca ctgcccgagg
     9121 cgatcgcgcg cgagcgcgtg ctgaccgccc cgctgcgccg cgaggccgat gcggtgatcg
     9181 acaccagcgc gctcaacgtg caccagctgc ggcgacggat catcaccgag ttcaccctgg
     9241 accacgccac ccggctgtcg ctgctgttcg aatcgttcgc ctacaagcgc ggcgtgccgg
     9301 ccgaggcgga cttcgtgttc gacgcgcgcg tgctgcccaa cccgcactgg gacccggaac
     9361 tgcgcgcgct gagcggccgc gagccgggcg tgcgcgacta cctggaagcg cagcccgacg
     9421 tgcagcgcta cctggcccag ctgatggact ttctcgatac ctggcttccc aaactgggcg
     9481 acggcacccg cagctacgtg accgtggcgt tcggctgtac cggcggcaag catcgctcgg
     9541 tgttcctggc cgagcgcatg gcccgccacg cacgcgagat gggctgggaa gacgtggcga
     9601 cctaccaccg cgagcaggat tgaggggggc ggccgggctg cgcccggcac ccgcggtagt
     9661 gccggccgct ggccggcaac agcaacagca acagcaaaag caaaagcggc attccgtgga
     9721 atggcagggc ggtgtgggta ggcaggacac gccgtgaacc cgtccttggg ggctcgatgg
     9781 cgccatccat ggcgccaacg gtcctgccta cccacaccac cccgcctctg acagattccg
     9841 tgtgctgttg gtgggtgtcg accttggtcg acacgatgga tccaggccat gcgtggatga
     9901 acctctgtca ggcatcggaa agacggacag ggtcggatcg ctttttcggc gaaacgggga
     9961 tgccacccgg gcaacgctga atacgggaca cagtacccct ctcctgctgc tatcgccgat
    10021 tcaccttgac ctgttaacgt gcagtaatga cctgtggcat tctcctcgta acacatcccg
    10081 gggtcgggac cgccctgctt gaggtggcga cccggctcct gcggcaattg ccgctgaaga
    10141 ccgaagcttt cgaagtaccg ttcgacgcag acctggacgc cctgctcccg ctcgcctcgg
    10201 ccgccctgcg gcgggtcgac ggcggtgaag gcgtgctgat cctgaccgac ctgtacggcg
    10261 ccagccccgc caaccttgcc gggcagctgg cccggctggg gaccccggtt cgccgggtgt
    10321 cggcgctgag cctgccgatg ttgctgcggg tgatgaatta tccggaacag ggactggatc
    10381 aactgcccgc cacagccgcg gcgggtaccc gtaatggagc gatagtcgac gatgcttgaa
    10441 cgagaactca ccgtgagcaa ccgcctgggg ctgcatgccc gggccaccgc caagctggtg
    10501 cagaccctgg cgccgttccg ctgcaacgtg accatggccg ccaagggccg tgagatcaac
    10561 gccaaaagca tcatgggcgt gatgctgctg gctgccggcc agggcactcc ggtcaccgtg
    10621 cgcatcaacg gcgaggacga agccgccgcg atggaggcgg tggtcagcct gttcgaacgc
    10681 cgtttcgacg aggacagctg agcgtgccac gcgcacgcgc cggccagctc ccctccggcc
    10741 agcggccggt gcagctgctg gccggccatg gcgcagcgcg cggcacggcc atgggccgcg
    10801 cccgcgtgcg cctgccgcat gccctggagg tggccgaaca gcgtgtcgcc gcccaccagg
    10861 tcgaggccga gctcgcgcgc ctgcaccatg cggtggatgc ggcgcgcacg gaaatgcacg
    10921 agctgcgcca gcgcctgcat ggggcactga accaggaagt gggcgagttc ctcgacctgc
    10981 acgcgctgct gctggacgac cccgagctgc tgtatggcct ggacgaactg atccgcagcg
    11041 gcccgtacag cgccggctat gcgctgcgcc tgcagcgcga ccgcctggcc agggtcttcg
    11101 atggcatgga cgatgcctac ctgaagagcc gcatggacga cctggaccat gtgatcggcc
    11161 gcatccacgc cttcctgcaa cccgagcgcc cgcctgcgat gaagggcctg gccggcgaga
    11221 tcctggtctg cgacaacatc gccccgtccg agctggcgca gctgcaggca cagggcgtgg
    11281 tcggcatcgt caccgccgcc ggcagcgcgc tgtcgcacag cgcgatcctg gcacgcagcc
    11341 tgcacctgcc gctgatcgtc aacgtaccgc agctgctcag ccgcatcgcc gatggcgacg
    11401 tgctgatcat cgacggcgcc gacggcagca tcacggtcaa cccgcaggcc gacaacctgc
    11461 gtgactaccg cgcacggctg aaagagcatg cgcgcgaaca gcgcgagctg ggccgcctgc
    11521 gcagcaagcc cagccggacc cgcgaccagg tcgacatcgc cctgctggcc aacgccgaat
    11581 cgctggagga cgtgacccag gcgcatgcgc tgggcgcgca ggggctgggc ctgtaccgca
    11641 ccgaattcct gttcctgcag cgcaacgagc tgccggacga ggaagaacag ttccagacct
    11701 accgcgatgc cgcgctgggc atgagcgggc gtccggtcac catccgcacg ctcgacctgg
    11761 gcgcggacaa ggccgatcgc accggcctta ccttgagcaa cgaagagaat ccggcactgg
    11821 gcctgcgcgg cgtgcgcctg tcgctggcgc ggccgaaggt ggccgacacc cagctgcgcg
    11881 cgatcctgcg cgcctcggcc tacggcaagc tgcgcgtgct ggttccgatg gtcagtaccc
    11941 gcgaggagct gctggcggtg cgccggcgca tgctcaagct gaccgaacag ctgcgcggcg
    12001 agggccacat ggtgtccgac catgtgccgc tgggcgcgat gatcgaagtc cccgcggccg
    12061 cactggcgct ggagagcttc atcgatctgg tcgatttcct gtcgatcggt accaacgacc
    12121 tggtgcagta cctgctcgcc gccgaccgca acaacgaggc gctgggcgag ctctactcgc
    12181 cgttgcatcc ggccgtgctg cggctgctgc agatggtgat cgacaccggc gcgcgccatc
    12241 gcatcccggt ggcggtctgc ggcgagatgg ccggcgatgc ccggatgacg ccactgctgc
    12301 tggcgctggg cctgagcgag ttcagcctgc atcccggtac gttgctggag gtgcgccggg
    12361 cgatccgcga ggccgacctg ggcgccttgc gcgcccgcgc gacgaagctg ctggccgcgc
    12421 gcgaccgccg cggcatcgag cgctggctgg cactggtgg
//
LOCUS       DAOKIP010000116        12376 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.116,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000116 DAOKIP010000000
VERSION     DAOKIP010000116.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 12376)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12376)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12376
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.116"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..873)
                     /gene="motB"
                     /locus_tag="QEL58_002616"
     CDS             complement(<1..873)
                     /gene="motB"
                     /locus_tag="QEL58_002616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010484123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor protein MotB"
                     /protein_id="HDS1677070.1"
                     /translation="MAETKPTVIVRRVKKGGHAAHHGGSWKVAYADFVTAMMAFFLVL
                     WLMASTSKPERAAISEYFRNPSPLSGKSATPAPGMAGPGGASTSMIKLGGATDVSRGN
                     SNDPFQNQKEAVPQPVDQQQRDKQQLEQLMKELQEAISRSQALEPFKDQLLLDLTPEG
                     LRIQIVDKQNRPMFDLGSATLKPYTQQILHELAEYLNHVPNRISLTGHTDITAYSAAR
                     GYGNWELSADRANAARRALIDGGLEDSKITRVVGLSSSVLFDKADPQNPINRRISIVV
                     MTQAAEAAALAGAGP"
     gene            complement(877..1731)
                     /gene="motA"
                     /locus_tag="QEL58_002617"
     CDS             complement(877..1731)
                     /gene="motA"
                     /locus_tag="QEL58_002617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019303316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor stator protein MotA"
                     /protein_id="HDS1677071.1"
                     /translation="MLIIVGFLVVIISVLGGYLGAHGRLGALWQPYELVIIGGAALGA
                     FLVGTPAKTVKQTLQAMVGVFKGPRYKQQDYIDVLSLLYELLNKARREGFMALEDHVE
                     RPAESALFGNYPKVQADHHLIDFITDCLRLMIGSNIEPHELEPLLELELEKHHAEAMA
                     PSQVLTKVADGLPGFGIVAAVLGIVITMGSIGGDIVEVGGHVAGALVGTFLGILLGYG
                     FVGPMAAAMEARAEQDSRIYESVKTALLACLRGYNPKIALEFARKTLPSNVRPAFSDF
                     EQHLKTVK"
     gene            complement(1823..2290)
                     /gene="msrB"
                     /locus_tag="QEL58_002618"
     CDS             complement(1823..2290)
                     /gene="msrB"
                     /locus_tag="QEL58_002618"
                     /EC_number="1.8.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (R)-S-oxide reductase MsrB"
                     /protein_id="HDS1677072.1"
                     /translation="MTAFDLTPPTATQTEALIAGLSSEERRVLLQHGTEAPFCGVFLD
                     NKREGVYCCRLCALPLFRSSTKFDSGTGWPSFFAPFDPAHVREIRDTSHGMVRTEITC
                     ARCGSHLGHVFPDGPPPTYERHCLNSVSLSFTGNGEPWPDPLRRGGAEAGVAG"
     gene            2429..2800
                     /locus_tag="QEL58_002619"
     CDS             2429..2800
                     /locus_tag="QEL58_002619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014645801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="classical arabinogalactan protein 4"
                     /protein_id="HDS1677073.1"
                     /translation="MKPTLPLLLIALLPALALAQVPTADPTATRSTTTVAPAPVAPPP
                     QAARPQPQVLPSPQPAQPIKSTGPARIAPTPAPKPADKVYDRNGRIVPGVRPAGPNRV
                     FDSRTGRYYDSVPQGDGQQIR"
     gene            2934..3101
                     /locus_tag="QEL58_002620"
     CDS             2934..3101
                     /locus_tag="QEL58_002620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677074.1"
                     /translation="MKNQQNRHPGKEPQGRNPQQQQQQQQQQQQQMEPQQPHKGGKQQ
                     EQRSQKHPQQR"
     gene            complement(3157..3636)
                     /locus_tag="QEL58_002621"
     CDS             complement(3157..3636)
                     /locus_tag="QEL58_002621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017166392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC ligand binding domain-containing
                     protein"
                     /protein_id="HDS1677075.1"
                     /translation="MATRTRELDKIDRKILRILQAEGRISFTELGERVGLSTTPCTER
                     VRRLEREAVITGYHAHLDPAAVKASLLVFVEISLAYKSGDIFEEFRRAALKLPNVLEC
                     HLVSGDFDYLLKARISEMASYRKLLGSTLLTLPHVRESKSYIVMEEVKETLSLPIPD"
     gene            3786..5090
                     /locus_tag="QEL58_002622"
     CDS             3786..5090
                     /locus_tag="QEL58_002622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008267290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-amino acid dehydrogenase"
                     /protein_id="HDS1677076.1"
                     /translation="MRVLVLGSGVIGTTSAWYLRQAGFEVTVIDRQPGPALETSFANA
                     GQLSFGYTSPWAAPGVPKKAIGWLFEKHAPLAIKPGMDLAQYRWLWQMLRNCTHERYA
                     INKARMVRMSEYSRDCLNELRAQVGIEFEGRDLGTTQLFRTQQQLDASAQDIEILAQY
                     GVPYEVLDRAGIIQAEPALAHVDGLVGALRLPRDQTGDCQLFTRRLAQMCVDAGVEFR
                     FDQDITGLEFDGDRISGVRIGGTLETADRFVVALGSYSPALVAPLGMRLPVYPLKGYS
                     LTLPITDPAMAPTSTILDESYKVAVTRFDDRIRVGGMAEVAGFDLSLSQRRRETLELV
                     VSDLYPKGGDLSRAQFWTGLRPATPDGTPVIGATPFRNLYLNTGHGTLGWTMACGSGR
                     YLADLMSARQPQISTEGLDIFRYGQYGHAPQHENRTCVLPAR"
     gene            5069..6139
                     /gene="alr"
                     /locus_tag="QEL58_002623"
     CDS             5069..6139
                     /gene="alr"
                     /locus_tag="QEL58_002623"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008267887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HDS1677077.1"
                     /translation="MRPARALIDLGALRSNYRLARELGGGKALAIIKADAYGHGAVRC
                     AQALEGEADGFGVATIEEALELRQASIRAPVLLLEGIFEPSDMALVAEHDFWFAVGAS
                     WQLEALAAFDSPRPLTVWLKLDSGMHRLGLDVDSFRAAHARLSALPQVERIVLMTHLA
                     RADEVDSERTHEQAATFARAIDGLSGETSVCNSPALLGWPDVRSDWVRPGLMLYGANP
                     LPEASEITARLRPVMTMQSKVIAERWIEAGEPVGYGARFVAKSRTRVGVVALGYADGY
                     PQFAPNGTPVLIDGQPGGLIGRVSMDMLTVDLTAHPQAGVGSVVELWGAAPTLSELAP
                     RCGVSAYQLPCAVKRVARVYQE"
     gene            complement(6273..6839)
                     /locus_tag="QEL58_002624"
     CDS             complement(6273..6839)
                     /locus_tag="QEL58_002624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010484117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3016 domain-containing protein"
                     /protein_id="HDS1677078.1"
                     /translation="MNRTLATALLLAGALMAGAANAAPRTVTDPRAPRALQADGPVSV
                     KWDDPAGFTEIRRSTNRFEAERGDWVQQLARYVQTTAAKPLQSGQTLDVTLVDIKRAG
                     DYEPWHGPRGSDIRIMRDIYPPRITLQYTLKDASGRIVDEGEAKLSDSGYLHNLGLRS
                     ESDPLRYEKRLIDDWVKRQLTSQATAAR"
     gene            7088..9076
                     /locus_tag="QEL58_002625"
     CDS             7088..9076
                     /locus_tag="QEL58_002625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014645806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HDS1677079.1"
                     /translation="MMVPAPEPDLHHGVLERINAGFCVIQVLFEGDRAVDYRFIEVND
                     AFERHTGLKDVRGQRMSLLEPNHEEDWFRIYGEVARSGRPAQFEMEARALGRSFAVDA
                     VRVGRPGEDKVGILFFDITARKQMEVELGESEARFSALADGLPMPVWVLDERGHARFV
                     NSAFSEFFGGDETRVPEDVWRGLVHPDDASVFEYELQEALKAQRSMHALVRARRADGQ
                     WRWLEMNARPRFSRMGRFIGLAGSSPDVTERREIELAREELLQSERAARSAAENMARL
                     KDEFLATLSHELRTPLTTILGWSELLLQRVDNTSPLFKGLNVIANSAGAQKRLISDML
                     DLSSMLLGKVQLEVEVLDLNLLLGEAIGAQELVAEGKALDVHLQLPEQPSLVLGDATR
                     LQQVLWNLLSNAIKFTPAEGRIDLQLQADGNHWVITVHDTGDGIAPEFLNHLFSRFRQ
                     ADGTTTRRHGGLGLGLAIVQQLVELHGGTVTAASEGHGHGATFTVRLPQHIPDAERRP
                     LREVISGPILEPVIVEPYPLRGMHVLAVEDQPEVLEYLRRMLEEQGASVSAASSAGEA
                     LALLADTGHLQYHVMLTDIGMPGMDGYGLVRTLREDMGVDAATLPAVAVTALARADDR
                     RRALASGFQEHVAKPYSVAQLVAAVRKVQVPRADSALH"
     gene            9120..9413
                     /locus_tag="QEL58_002626"
     CDS             9120..9413
                     /locus_tag="QEL58_002626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005415124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3247 family protein"
                     /protein_id="HDS1677080.1"
                     /translation="MSRTAPRIHTDPAQIARLEALLPQLEGETQVQLTLHDGRRLLGT
                     VAVKPTVQQYRNAAGDEGSNGQLRLDDYDTPVQQHHVWLDEIASVDRLPPRAP"
     gene            complement(9481..9744)
                     /locus_tag="QEL58_002627"
     CDS             complement(9481..9744)
                     /locus_tag="QEL58_002627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014035846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677081.1"
                     /translation="MRALFVGGVVDNSEMDLEGSHPPVHYPEDTGGGHSRYRLHQVGH
                     GADGSVAYAVYGAPDLADDEVARVAEERAYARRFEATPTLFEH"
     gene            9902..10966
                     /locus_tag="QEL58_002628"
     CDS             9902..10966
                     /locus_tag="QEL58_002628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005415126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HDS1677082.1"
                     /translation="MASSDDAPLQTLFLPFSQGALRWPEGPVAFLRARDGWPLREAAG
                     HREVHCEQSFAPFAQPLQQAAGWTVSGQLDDVAGRGRYPLVLVLPPRQREEARALFAR
                     ALALVADGGRIVACQSNNEGARSGEGDLKQLTGLGGSLTKNHCRVYWTAPLQGQHDAD
                     LAKRWSALDAVRPIVGGRFLSRPGVFAWDRIDPASALLAEHLPADLAGRAADLGAGYG
                     YLSRELLERCPKITALDLYEAEQRALALAELNLAPPPRPLPLRFLWRDVTAGIEPGYD
                     VIISNPPFHTPSRADRPDIGQRFIAVAAQALRPGGRLYVVANRHLPYEHTLNDSFGAV
                     RVVAERDGFKLVEAVKGKGR"
     gene            10963..11664
                     /locus_tag="QEL58_002629"
     CDS             10963..11664
                     /locus_tag="QEL58_002629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004140604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridine synthase"
                     /protein_id="HDS1677083.1"
                     /translation="MKLVKHIANLGYGSRKQVQWMFREGRVTDADGEVLYADDQVPHE
                     AIRVDGEPLDPPVGLSIALHKPAGYTCSTKDTGRLIYDLLPPRFRDRDPVLSTVGRLD
                     RDTSGLLLLTDDGGLLHRIISPKSKLPKVYEVELSDDLRGDEVALFASGTLMLESEKT
                     SLLPAELEVLDARRARLVLHEGRYHQVRRMFAATGNHVQALHRSRVGGLDLQGLDEGQ
                     WRQLTSTDLDTLFAP"
     gene            11661..12344
                     /locus_tag="QEL58_002630"
     CDS             11661..12344
                     /locus_tag="QEL58_002630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family phosphatase"
                     /protein_id="HDS1677084.1"
                     /translation="MTTIAALPFLPDAVIFDMDGLMIDSERVALACWSEAADEFGLGL
                     DKAVFLRMVGLGDRDTHALLRAQGIEDSVIEAVAARCHDLYEARTQTGLPLRPGILEL
                     LELLKAHAVPRAVATTTRQPRANRKLAAAGLLPYFDAVITSGDVARPKPAPDIYLLAA
                     QRLGQAPERCLALEDSPAGTRAALAAGMTVIQVPDLVHPDEELRALGHRIVGSLVDAH
                     ALLLPLLPK"
BASE COUNT         1950 a         4167 c         4241 g         2018 t
ORIGIN      
        1 cgggccggcc ccggccagcg cggccgcttc ggccgcctgg gtcatcacca cgatgctgat
       61 gcggcggttg atcgggttct gcgggtcggc cttgtcgaac agcaccgacg aggacaggcc
      121 aaccacgcgg gtgatcttgc tgtcctccag gccaccatcg atcagcgcac gccgcgcggc
      181 gttggcgcga tcggcgctca gttcccagtt gccgtagccg cgtgcggccg aataggcggt
      241 gatatcggta tgcccggtca ggctgatccg gttcggaacg tggttcaggt attcggccag
      301 ctcgtgcagg atctgctgcg tgtacggctt cagcgtggcg ctgccgaggt cgaacatcgg
      361 ccggttctgc ttgtccacga tctggatgcg caggccttcc ggggtcaggt ccagcagcag
      421 ctggtccttg aacggctcca gcgcctggct cctgctgatc gcttcctgca gttccttcat
      481 cagctgctcc agctgctgct tgtcgcgctg ctgctggtcc accggctgcg gcaccgcctc
      541 cttctggttc tggaagggat cgttgctgtt gccgcgggaa acgtcggtgg caccgccgag
      601 cttgatcatc gaggtgctgg caccgcccgg gccggccatg ccgggggcgg gggtggcgct
      661 cttgccgctg agcgggctgg ggttgcggaa gtactcggaa atggcggccc gttccggctt
      721 gctggtgctg gccatcagcc acagcaccag gaagaaggcc atcatcgcgg tcacgaagtc
      781 ggcataggcc accttccacg agccgccgtg gtgggcggcg tggccgccct tcttgacccg
      841 gcggacgatg acggtgggct tggtctcggc catggcttac ttgaccgtct tcaggtgctg
      901 ctcgaaatcg gagaaggccg ggcgcacatt cgacggcagc gtcttgcggg cgaattccag
      961 cgcgatcttc gggttgtagc cgcgcaggca ggccagcagg gcggtcttca ccgactcgta
     1021 gatgcggctg tcctgctcgg cacgggcttc catcgccgcc gccatcgggc cgacgaagcc
     1081 gtagcccagc aggatgccga ggaaggtgcc gaccagcgcg ccggccacgt ggccgccgac
     1141 ctcgacgatg tcaccaccga tcgagcccat ggtgatgacg atgcccagca ctgcggcgac
     1201 gatgccgaaa ccgggcagtc cgtcggcgac cttggtcagc acctgcgacg gcgccatggc
     1261 ctcggcatgg tgcttttcca gctccagttc cagcagcggc tccagctcgt gcggctcgat
     1321 gttgctgccg atcatcaggc gcaggcagtc ggtgatgaag tcgatcaggt ggtggtcggc
     1381 ctgcaccttg gggtagttgc cgaacagcgc gctctcggcc ggacgctcga catggtcttc
     1441 cagcgccatg aagccttcgc ggcgcgcctt gttgagcagc tcgtacagca ggctgagcac
     1501 atcgatgtag tcctgctgct tgtaacgcgg gcccttgaac acgccgacca tggcctgcag
     1561 ggtctgcttg accgtcttgg ccggggtgcc gaccaggaac gcgcccagtg cggcaccgcc
     1621 gatgatgacc agctcgtagg gttgccacag cgcccccagc cgaccgtgtg cgccgaggta
     1681 gccgcccagc acgctgatga tgacgaccag gaatccaacg atgatgagca tggcgcgacg
     1741 caaggagcgg ggatatctcc ttgtcggccc atcacctggt tttctgaaga gggaattctg
     1801 tgaaatcggt cagcggggtg tttcagcccg ccacaccggc ctccgcaccg ccacgccgca
     1861 gcggatcagg ccacggctcg ccattgccgg tgaacgaaag tgagaccgag ttcaggcagt
     1921 ggcgctcgta ggtgggcggc gggccgtccg ggaacacatg gcccagatgg ctgccacagc
     1981 gggcgcaggt gatctcggtg cggaccatgc cgtggctggt gtcgcggatc tcgcgcacat
     2041 gcgccgggtc gaacggggcg aagaagctgg gccagccggt gccggaatcg aacttggtgc
     2101 tggagcggaa cagcggcaac gcgcacagcc ggcagcagta gacgccctcg cgcttgttgt
     2161 cgaggaagac cccgcagaac ggcgcttcgg tgccgtgctg cagcagcacg cggcgctcct
     2221 cgctgctgag gccggcaatc agcgcctcgg tctgggtggc ggtggggggc gtcaggtcga
     2281 aggcagtcat gccggctctc cgtgggtgat ggcctgggga tgcctgcgga aatgggggtg
     2341 gcggcccggc cttgcaagtg tgatggccgt tcatgggcgg cacacaggcg caggcgcaag
     2401 gtgaacgcga tccacgccgg agcgtgccat gaaaccgacc cttcccctgc tgctgatcgc
     2461 cctgctgccc gcgctggcgc tggcccaggt gcccactgcc gatccgaccg ccacccgcag
     2521 caccaccacc gtggcccccg cgccggtggc accgccgccg caagcggccc gcccgcagcc
     2581 ccaggtgctg ccgtcaccgc agccggcgca accgatcaaa tccaccggtc cggcccggat
     2641 tgcacccacc ccggcgccga agccggccga caaggtctac gaccgcaatg gacgcatcgt
     2701 ccccggtgtg cgcccggccg gtcccaaccg tgtgttcgat tcgcgcaccg gccgctatta
     2761 cgacagcgtg ccgcagggcg acggacagca gatccgctag cgccggcctg aacgcacgaa
     2821 aacaaccgcg tgcggatcac tgctttttcg cctgcgatta accgttccgg gaccactttg
     2881 acggtgcgcc ggcatcccgt cgtcgcatgt ccttcgtcca ttggatcgcg atcatgaaaa
     2941 accagcagaa ccgtcatccc ggcaaggaac cgcagggccg caatccgcag cagcaacagc
     3001 aacagcaaca acaacaacaa caacagatgg aaccgcagca gccgcacaag ggcggcaagc
     3061 agcaggagca gcgctcgcag aagcatccgc agcagcgctg acgggcacgg ggtcggatcc
     3121 cgcattgcgg gctctggccc caaccgcgtt gagccctcag tccggaatcg gcaggctcag
     3181 cgtctccttc acttcttcca tcacgatgta gctcttcgat tcacgcacat gcggcagggt
     3241 cagcaacgtg ctgccgagca gcttgcgata ggaggccatc tcgctgatcc gcgccttcag
     3301 caggtaatcg aagtcgcccg acaccaggtg gcactccagc acgttgggca gcttcagcgc
     3361 cgcgcgccgg aattcctcga agatgtcgcc ggacttgtag gccaggctga tctccacgaa
     3421 caccagcagg ctggccttca ccgccgccgg gtcgaggtgg gcgtggtagc cggtgatcac
     3481 cgcttcgcgt tccagccggc gcacgcgctc ggtgcacggg gtggtggaca ggccgacccg
     3541 ctcacccagt tcggtgaagg aaatgcggcc ctcggcctgc aggatgcgca ggatcttgcg
     3601 gtcgatcttg tccagttcgc gggtacgggt ggccatggcc gtcaaccttg gggaatgaat
     3661 tgcaggagaa catcctgccg gttgatttca aatcaggcaa atcaactggt attggctgtc
     3721 tatacttccc caattatggt cccggcacgc tccagtgcag ggaatgatcg ggttggagaa
     3781 gtcccatgcg agtcctagtt ctcggcagcg gcgtgatcgg caccaccagt gcctggtacc
     3841 tgcgacaggc cgggtttgaa gtcacggtca tcgaccgcca acccggtccg gcgctggaaa
     3901 ccagcttcgc caatgccggg cagctgtcgt tcggctacac ctcgccgtgg gcagcgccgg
     3961 gcgtgccgaa gaaggccatc ggctggctgt tcgagaagca cgcgccgctg gcgatcaagc
     4021 cgggcatgga cctggcccag taccgctggc tgtggcagat gctgcgcaac tgcacccacg
     4081 agcgctatgc gatcaacaag gcacgcatgg tgcgcatgtc cgagtacagc cgcgactgcc
     4141 tgaacgagct gcgcgcgcag gtcggcatcg agttcgaggg ccgtgacctg ggcaccaccc
     4201 agctgttccg cacccagcag cagctggatg cctcggcgca ggacatcgag atcctggccc
     4261 agtacggcgt gccgtacgag gtgctggacc gcgccggcat catccaggcc gaaccggccc
     4321 tggcccatgt cgatggcctg gtcggcgcgc tgcgcctgcc gcgtgaccag accggcgact
     4381 gccagctgtt cacccgccgc ctggcgcaga tgtgcgtgga tgccggcgtc gagttccgtt
     4441 tcgaccagga catcaccggc ctggagttcg atggcgaccg catcagcggc gtgcgcatcg
     4501 gcggcacgct ggaaaccgcc gaccgcttcg tggtcgcgct gggcagctac tcgcccgcgc
     4561 tggtggcacc gctgggcatg cgcctgccgg tgtacccgct gaagggctac tcgctgaccc
     4621 tgccgatcac cgatccggcg atggcgccga cctcgaccat ccttgatgag agctacaagg
     4681 tggcggtgac ccgcttcgac gaccgtatcc gtgtcggtgg catggccgaa gtggccggct
     4741 tcgacctgtc gctgtcgcag cgccgtcgcg aaaccctgga gttggtcgtc agcgacctgt
     4801 acccgaaggg cggcgacctg tcgcgcgcgc agttctggac cggcctgcgc ccggccacgc
     4861 cggacggtac gccggtgatc ggcgccacac cgttccgcaa cctgtacctc aataccggcc
     4921 acggcaccct gggctggacc atggcctgtg gctcgggccg ctacctggcc gacctgatga
     4981 gcgcgcgcca gccgcagatc agcaccgagg gcctggatat tttccgctac ggccagtacg
     5041 gtcacgcgcc gcaacatgag aaccgcacat gcgtcctgcc cgcgcgctga tcgatctggg
     5101 cgccctgcgc agcaactacc ggctcgcccg tgaactgggc ggtggcaagg ccctggcgat
     5161 catcaaggcc gatgcgtatg gccatggcgc ggtgcgctgt gcccaggcgc tggaaggcga
     5221 ggccgatggt ttcggcgtgg ccaccatcga agaggcgctg gaactgcgcc aggccagcat
     5281 ccgcgcgccg gtcctgctgc tggaagggat cttcgagccc agcgacatgg cgttggtggc
     5341 cgagcacgat ttctggttcg cggtgggcgc atcgtggcag ctggaggcat tggctgcctt
     5401 cgacagcccg cgcccgctga cggtgtggct gaagctggac agcggcatgc atcgcctggg
     5461 cctggacgtg gacagcttcc gcgccgcgca tgcacgcctg tcggcactgc cgcaggtcga
     5521 gcgcatcgtg ctgatgaccc acctggcgcg tgccgacgag gtggacagcg aacgcaccca
     5581 cgaacaggcc gcgaccttcg cccgcgccat cgacggcctg tccggcgaga ccagcgtgtg
     5641 caattcgccg gcgctgctcg gctggccgga tgtgcgcagc gactgggtgc gcccgggcct
     5701 gatgctgtac ggcgccaacc cgctgccgga ggcttcggag atcactgcgc ggctgcgccc
     5761 ggtgatgacc atgcagtcga aggtgatcgc cgagcgctgg atcgaggccg gcgagccggt
     5821 gggctatggc gcccgcttcg tggcgaagtc gcgcacccgc gtgggtgtgg tcgcgctggg
     5881 ttacgccgac gggtatccgc agttcgcccc gaacggcacc ccggtgctga tcgacggcca
     5941 gcccggtggc ctgatcgggc gcgtgtcgat ggacatgttg accgtggacc tgaccgcgca
     6001 tccgcaggcc ggcgtcggca gtgtcgtgga actgtggggt gccgcgccga cgttgtctga
     6061 actggcaccg cgctgtggcg taagtgccta tcagctgccc tgtgcggtca agcgcgtggc
     6121 gcgcgtatat caggagtgag gtgctgccgg ccagcggccg gcactacctg gatgcatggc
     6181 gtccacggct ctggtagcgg ccgaccttgg tcggcgcttt gaatgcgtgt cgaccaaggt
     6241 cgacacctac cagagccgag cgcggcgcgg aattaccgcg ctgcggtcgc ctggctggtc
     6301 agctgacgct tcacccaatc atcgatcagg cgcttctcgt aacgcagcgg atcgctttcg
     6361 ctcctcagcc ccaggttgtg caggtagccg ctgtcgctca gcttggcttc gccctcatcg
     6421 acgatgcggc cgctggcatc cttcagcgtg tactgcaggg tgatccgcgg cggatagatg
     6481 tcgcgcatga tccggatgtc gctgccgcgc gggccgtgcc agggctcata gtcgccagca
     6541 cgcttgatgt cgaccagggt cacgtccagg gtctgcccgg actgcagcgg cttggccgcc
     6601 gtggtctgca cgtagcgggc cagctgctgc acccagtcgc cacgttcggc ttcgaagcgg
     6661 ttggtgctgc ggcggatttc ggtgaaaccg gccggatcgt cccacttcac gctgaccggg
     6721 ccatcggcct gcagcgcgcg tggggcccgc ggatcggtga cggtacgcgg cgcggcgttc
     6781 gcggcgccgg ccatgagggc gcctgccagc agcagggcgg tggccaatgt gcggttcatg
     6841 acggtctcct gcgccccatc gttggggacg gttctgtcta tctatggatc gagtgtgatc
     6901 ccgcttccgg gccaccgcaa cggccgattg cgtcatgcgc aagagcggtt gccgccaatt
     6961 catcgtcgtc aaccctgact gacggcgctt gacgctgtga atacgctctc tggaagatgc
     7021 tgtgtctcca atccggcccg tccagacgcc cttgtccaca ctgccgcccc tagtggagcg
     7081 cccaccgttg atggtgccgg cgcccgaacc cgacctgcat catggcgtgc ttgagcgcat
     7141 caacgccggc ttctgcgtga tccaggtgct gttcgagggc gatcgtgcgg tcgactatcg
     7201 cttcatcgag gtcaacgatg ccttcgagcg ccataccggg ctgaaggatg tacgcggcca
     7261 gcgcatgagc ctgctggagc cgaaccacga ggaagactgg ttccgcatct acggcgaggt
     7321 cgcccgcagc ggccgcccgg cgcagttcga gatggaagcg cgcgcgctgg gccgttcgtt
     7381 cgcggtcgat gccgtgcgcg tgggccggcc gggcgaagac aaggtcggca tcctgttctt
     7441 cgacatcacc gcgcgcaagc agatggaagt ggaactgggc gagagcgaag cccgtttcag
     7501 cgcgctggcc gatggcctgc cgatgccggt gtgggtgctg gacgagcgcg gccatgcccg
     7561 tttcgtcaac agtgccttca gtgagttctt cggtggtgac gagacgcgcg tgccggaaga
     7621 cgtgtggcgc ggcctggtcc atccggatga cgcctcggtg ttcgagtacg aactgcagga
     7681 ggcgctgaaa gcgcagcgtt ccatgcatgc cctggtgcgc gcgcgccgcg ccgatggcca
     7741 gtggcgctgg ctggagatga acgcccggcc gcgcttctcg cgcatgggac gcttcatcgg
     7801 cctggccggc agcagcccgg acgtgaccga acgccgcgag atcgagctgg cccgcgagga
     7861 actgctgcag tccgagcgcg ccgcgcgcag tgccgcggaa aacatggcgc ggctgaagga
     7921 cgaattcctg gccacgctgt cgcacgagct gcgcacgccg ctgaccacca tcctgggctg
     7981 gagcgagttg ctgctgcagc gcgtggacaa caccagcccg ctgttcaagg gcctgaacgt
     8041 gatcgccaac agcgccggcg cgcagaagcg gctgatctcg gacatgctcg acctcagcag
     8101 catgctgctg ggcaaggtgc agctggaagt ggaagtgctg gacctcaatc tgctgcttgg
     8161 cgaagccatc ggcgcgcagg aactggtagc cgaaggcaag gcgctggacg ttcacctgca
     8221 actgcccgag cagcccagcc tggtgctggg cgatgccacc cgcctgcagc aggtgctgtg
     8281 gaacctgctc tccaatgcca tcaagttcac cccggccgaa ggccgcatcg acctgcagct
     8341 gcaggccgac ggcaaccact gggtgatcac cgtgcatgac accggcgacg gtatcgcgcc
     8401 tgaattcctc aatcacctgt tcagccgttt ccgccaggcc gatggcacca ccacgcgccg
     8461 tcacggtggc ctgggcctgg gcctggcgat cgtgcagcag ctggtcgagc tgcatggcgg
     8521 caccgtgacc gccgccagcg aaggccacgg ccacggcgcc accttcaccg tgcggctgcc
     8581 gcagcacatt cccgatgccg agcgccgtcc actgcgcgaa gtgatcagcg ggccgatcct
     8641 ggaaccggtg atcgtcgagc cgtatccgct gcgcggcatg catgtgctgg cggtggaaga
     8701 ccagccggaa gtgctggagt acctgcgacg catgctggaa gagcagggcg ccagtgtctc
     8761 cgcggccagt tcggccggcg aggcgctggc gctgctggcc gacaccggcc acctgcagta
     8821 ccacgtgatg ctgaccgaca tcggcatgcc gggcatggat ggctatggcc tggtgcgtac
     8881 gctgcgcgag gacatggggg tggatgcggc gaccctgccg gcggtggcgg tgaccgcgct
     8941 ggcgcgcgcc gatgaccgcc gccgcgcgct ggcatcgggc ttccaggaac acgtggccaa
     9001 gccctattcg gtggcgcagc tggtggccgc cgtacgcaag gtgcaggtgc cgcgcgcaga
     9061 cagcgcgctg cactgagcat tcacggccga tcggcgaccc tgcatgcagg aggtcgccga
     9121 tgtcccgcac agctccccgt atccataccg atccggcgca gatcgcgcgc ctggaagccc
     9181 tgctaccaca gctggaaggt gaaacgcagg tgcaactcac cctgcatgac ggtcgccgcc
     9241 tgctgggcac ggtggcggtc aagcccaccg tccagcaata ccgcaacgct gcgggcgatg
     9301 aaggcagcaa tggtcagctg cgcctggatg actacgacac gccggtgcag cagcaccacg
     9361 tctggctgga tgagatcgcc agcgtagacc gcctgccacc cagggcgcct tgatccgata
     9421 tagcgccgag ccctcgctcg gcgctaccgc ccgagcgctg gctcgggcgc tacaggggtg
     9481 tcaatgctcg aacagcgtgg gcgtcgcctc gaagcggcgc gcataggcgc gttcttccgc
     9541 gacccgggct acctcatcgt cggccaggtc gggcgcgccg tacaccgcat aggccacgct
     9601 gccgtcggcg ccatggccga cctggtgcag ccggtagcgc gagtggccgc cgccggtgtc
     9661 ctcggggtag tgcacgggcg gatggctgcc ttccaggtcc atttcactgt tgtcgaccac
     9721 gccaccgacg aacaaggctc gcatgcaggt tctcctgggt ttgcggggga gcctctaccc
     9781 tgaacgtttc aatgttgctg gcacatcaag gccccgttcg ggtttcgcaa agtggcccgc
     9841 cggggccgga ccggccaagc cggtacaatg gacggccctc acgcttgaag tacccgcgcc
     9901 gatggcctcc agcgacgacg ctcccctgca gaccctgttc ctgccgttct cccaaggcgc
     9961 cctgcgctgg ccggagggcc cggtggcctt cctgcgtgcc cgcgacggct ggccgttgcg
    10021 cgaagcggcc ggccaccgcg aggtgcactg cgagcagagc tttgccccgt tcgcacagcc
    10081 gctgcagcag gccgccggct ggaccgtcag tggccagctg gacgacgtgg ccggcagggg
    10141 ccgctacccg ctggtgctgg tgctgccgcc gcgccagcgc gaagaggccc gtgcgctgtt
    10201 cgcccgcgcg ctggcgctgg tggccgacgg cggtcgcatc gtggcctgcc agtccaacaa
    10261 cgaaggcgca cgctccggcg agggcgacct caagcagctg accggcctcg gcggcagcct
    10321 gaccaagaac cactgccgcg tgtactggac cgcgccgttg cagggccagc acgatgccga
    10381 cctggccaag cgctggtcgg cgctggacgc ggtgcgcccg atcgtcggcg gccgtttcct
    10441 cagccgcccg ggcgtgttcg cctgggatcg catcgatccg gcctcggcat tgctggcaga
    10501 gcacctgccg gccgacctgg ccgggcgtgc cgccgacctc ggtgccggtt atggctacct
    10561 gtcgcgcgaa ctgctggagc gctgcccgaa gatcaccgcg ctggacctgt acgaggccga
    10621 gcagcgcgcg ctggccctgg ccgaactgaa cctggcgccg ccgccgcgcc cgctgccgct
    10681 gcgtttcctg tggcgtgacg tcaccgccgg catcgagccg ggctacgacg tgatcatcag
    10741 caacccgccg ttccacacac cgtcgcgggc cgaccgcccg gacatcggcc agcgcttcat
    10801 cgccgtggcc gcgcaggcgc tgcgcccggg cgggcggctg tacgtggtgg ccaaccgcca
    10861 cctgccctac gagcacaccc tcaacgacag cttcggcgcg gtgcgcgtgg ttgccgagcg
    10921 cgacggtttc aagctggttg aagcggtgaa ggggaagggc cgatgaagct ggtcaagcac
    10981 atcgccaacc tgggctatgg cagccgcaag caggtgcagt ggatgttccg cgagggccgc
    11041 gtgaccgatg ccgacggtga ggtgctgtat gccgacgacc aggtgccgca cgaggccatc
    11101 cgcgttgacg gcgagccgct ggatccgcct gtggggctgt cgatcgcgct gcacaagccg
    11161 gccggctaca cctgttcgac caaggacacc ggccgcctga tctacgacct gctgccgccg
    11221 cgcttccgcg accgcgaccc ggtgctgtcc acggtcggcc gcctcgaccg cgataccagt
    11281 ggcctgctgc tgctgaccga cgatggcggc ctgctgcacc ggatcatctc gccgaagtcg
    11341 aagctgccca aggtctacga agtggaactg agcgacgacc tgcgcggcga tgaagtggcc
    11401 ctgttcgcca gcggcacgct gatgctggag tccgagaaga cgtccctgct gccggctgaa
    11461 ctcgaggtgc tggatgcgcg ccgcgcgcgc ctggtgctgc acgaaggccg ctaccatcag
    11521 gtgcgccgca tgttcgccgc caccggcaac cacgtgcagg ccctgcaccg cagccgcgtt
    11581 ggcgggctgg acctgcaggg gctggacgaa gggcaatggc ggcagctcac ctccaccgac
    11641 ctggatacgc tgttcgctcc atgaccacta tcgctgcgct gccgttcctg cccgacgccg
    11701 tcatcttcga catggacggc ctgatgatcg acagcgagcg ggtcgcgctg gcctgctgga
    11761 gcgaggccgc cgacgaattc ggactgggcc tggacaaggc agtgttcctg cgcatggttg
    11821 gcctcggcga tcgtgacacg cacgcactgc tgcgcgcgca gggcatcgaa gacagcgtga
    11881 tcgaagcggt cgcggcacgt tgccatgacc tgtatgaagc acgcacgcag accggcctgc
    11941 cgctgcggcc gggcatcctg gagctgctgg aactgctgaa ggcgcacgcg gttccgcgcg
    12001 cggtggcgac caccacccgg cagccgcgcg ccaaccgcaa gctggccgcg gcgggcctgc
    12061 tgccctactt cgatgcggtg atcaccagtg gcgacgtggc gcggccgaag ccggcgccgg
    12121 atatctacct gttggctgca cagcggctgg gccaggcgcc ggagcgctgc ctggcgctgg
    12181 aggactcacc ggccggtacg cgcgccgcat tggcggccgg catgaccgtg atccaggtgc
    12241 cggacctggt gcacccggac gaagagttgc gcgcactggg ccatcgcatc gtcggctcgc
    12301 tggtggacgc gcacgcactg ctgctgccgc tgctgccgaa ataaggtggg tgccaaccgc
    12361 acctgacggt gggtgc
//
LOCUS       DAOKIP010000117        12338 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.117,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000117 DAOKIP010000000
VERSION     DAOKIP010000117.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 12338)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12338)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12338
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.117"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            85..726
                     /locus_tag="QEL58_002631"
     CDS             85..726
                     /locus_tag="QEL58_002631"
                     /EC_number="4.2.1.109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylthioribulose 1-phosphate dehydratase"
                     /protein_id="HDS1677085.1"
                     /translation="MNAPTFPYDTARLSELAQLLIDNVRELAHAGWTPATSSNFSHRL
                     DDGHAAITVSGKDKGRLIEDDIMVVDFDGKAVGRPLRPSAETLLHTQLYRRFPEIGCV
                     LHTHSPVQTIASRLYAPQGHVHLEGYELLKAFAGNSTHEMAIDVPVFANTQDMNVLSR
                     QVDDLLDRQALWGYLIDGHGLYAWGRDMAEARRHLEAFEFLFHCELELRKLRG"
     gene            819..1376
                     /locus_tag="QEL58_002632"
     CDS             819..1376
                     /locus_tag="QEL58_002632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acireductone dioxygenase"
                     /protein_id="HDS1677086.1"
                     /translation="MSRLRIYDDTRPESPLLDSQDGAIIAAELQKIGVTFERWQATAP
                     VAPGASQDEVFAAYRADIDRLVAERGFKSVDVASIAPDNPNRAELRKKFLDEHFHKED
                     EVRFFVAGSGLFTLHVGDKVYEIECVKDDLIAVPDGTTHWFDMGDEPSFVAIRFFTEP
                     DGWVGHFTGTDIAQKFPRYVPTQAS"
     gene            1380..2075
                     /gene="mtnC"
                     /locus_tag="QEL58_002633"
     CDS             1380..2075
                     /gene="mtnC"
                     /locus_tag="QEL58_002633"
                     /EC_number="3.1.3.77"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008268027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acireductone synthase"
                     /protein_id="HDS1677087.1"
                     /translation="MQPRVILTDIEGTTSSISFVKNVLFPYARKALPAFVAEHGQQPE
                     VRRWLDAVASEIGGACQDSLVAETLQGWIDQDRKHTALKALQGMIWDEGYRRGDYTAH
                     FYPEVAPVLNGWHASGLPLYVYSSGSVPAQKLFFGFSDAGDLSPLVSGWFDTEVGGKR
                     EADSYRHIVQAIGVPAGEILFLSDVVEELDAAREAGLQTRLIDRLDDYPLPRTGQAAN
                     GHERVENFQQIQL"
     gene            complement(2185..4803)
                     /locus_tag="QEL58_002634"
     CDS             complement(2185..4803)
                     /locus_tag="QEL58_002634"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 2 protein"
                     /protein_id="HDS1677088.1"
                     /translation="MHRLSLVVRLLLLLIAASVFPATAAPLQAQWEFRMLPGDAQGAA
                     HPGLQQWRAAKVPGSVHTDLLAHALIRDPYVGAPEAELQWIGLADWEYRARFDVDAAT
                     LARPNAELRFDGLDTYAEVRLNGKPLLRADNAHRTWRARVEGRLRAKGNELQIVFRSP
                     IRTLLPGVQTMAHKIAGNYPSPYGDEPKDAMVGNFARKPAHHFGWDWGPRYVTAGVWR
                     GVDLQAWDAHRLADLAVRTDALDAQQAKLAVLLQVEQGAVSGSAVVHVEVRDPQGRSV
                     AQVQRTVPLMPGQNTVELPVELTKPQRWWPVGHGAQDRYTVQARLDDGSTAVLAREQR
                     IGLRTVELRREQDGKGGQGFAFVINGVPIFAKGANVIPFDAFPARVDAARLRQVLTAA
                     RDANMNMLRNWGGGYYEDDAFFDIADELGLLVWQDFMFGGGMQPGYDPAFRASVVAEA
                     RDNVRRLRHHPSIVLWCGNNEEETAWKDWGHGRDLKAADPAFAAKVWQGYVDLFGNDL
                     RQVVGEEGLGVPYWSSSPSNDLDEKANDSTRGDKHYWQVWGNPALPVQAYLRETPRFM
                     SEYGLQAWPSVATVDQIATRAEQRIDSPVIRAHQKFMAGEGNSRLLHYIELGYGTPKD
                     FEDFVYLSQVMQADGIALAALHHRASRPYTMGSLYWQLNDVWPGASWSSVDYFGRWKA
                     LHFAARRFFAPVTVAALRDEGRTRVGLLNDGAALDARWRLRVMDVDGKVLRRREQAVT
                     LAAAGVTDIGTYSDAELLAGADPKRTVAVFELLRDGRVSARQVVGFVEAKDQQLPRQK
                     LKAALSIEGDHYRLRLESATYVRAAWIDFGALDVQVEDNLLDLLPGETRDIAVRGPVD
                     LAALREALKLKTLNDR"
     gene            complement(4865..6091)
                     /locus_tag="QEL58_002635"
     CDS             complement(4865..6091)
                     /locus_tag="QEL58_002635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005413182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AGE family epimerase/isomerase"
                     /protein_id="HDS1677089.1"
                     /translation="MSTSPDFRSPAFLRAHIADTMAFYHPRCIDPNGGFFHYFRDDGS
                     IYDASHRHLVSSTRFVFNYAMAYREFGNAEYREAVEHGVRYLREVHRNPATGGYAWTL
                     RDGKVEDDMNHCYGVAFVLLAYSCALKAGIEQAREWMDETWQLLEARFWEPQHGLYKD
                     EADGQWNFTGYRGQNANMHMCEAMLAAFEASGEQRYVERALLLADNMTRRQAAKAGGL
                     VWEHYDVNWEIDWDYNLDDPKHLFRPWGFQPGHQTEWAKLLLILDRHVQADWLVPTAQ
                     HLFDVAVARSWDDARGGLYYGFAPEARRQPGMDGAPIGGDSFVCDDDKYFWVQAETLA
                     TAALMARRTGDDRYWQWYDRLWAYSWEHFVDHRYGAWFRILDADNRKYSDEKSPAGKV
                     DYHTMGACYEVLNVVR"
     gene            complement(6088..7083)
                     /locus_tag="QEL58_002636"
     CDS             complement(6088..7083)
                     /locus_tag="QEL58_002636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate kinase"
                     /protein_id="HDS1677090.1"
                     /translation="MGAIVCFGEILIDLLAQLPASADTPRAFLQYAGGAPANVAVAAA
                     RLGAKTQFVGMLGRDMFGDFLADSLVEHGVGTDYIVRTDAAKTALAFVALDASGERSF
                     SFYRPPAADLLFRDSDFQAACLDSAQCFHVCSNSLTEPAIAEATFAGMDRARAAGAVV
                     SLDLNLRPALWPADVDPTPRLWQALERADLVKLSREELDYLAAPLGADGEATVLRRLL
                     AAQARWVIVTDGAATLHWYTRDNHGTVTSFRVATVDTTAAGDAFVGGVLVGLLERGGA
                     GAGFAAFCKDPEAITATLRFGAAVGALAVTRKGAFAAMPSLDEVQQLLQAQDITA"
     gene            complement(7091..8404)
                     /gene="fucP"
                     /locus_tag="QEL58_002637"
     CDS             complement(7091..8404)
                     /gene="fucP"
                     /locus_tag="QEL58_002637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-fucose:H+ symporter permease"
                     /protein_id="HDS1677091.1"
                     /translation="MPISATPRPSGSSGNAPAVTNGKALAVVTTIFFMWGFLTCLNDI
                     LIPHLKAVFELNYAKAMLVQFTFFGTYFLMSLPAGRLVAALGYKKGIVAGLVIAGIGA
                     LGFWPAAELRVYGAFLGALFVLASGITVLQVAANPYVALLGPEQTSSSRLTLAQALNS
                     LGTAIAPIFGGMLILSNTVKSADDIAALPAAEQLAYRAAEAQAVQGPYVCLAVALVLL
                     ALFVFLFRLPALSDATEQADQGHHHSYLDALRKRHLLLGVLGIFFYVGAEVSIGSFLV
                     NYLSMPNIGGFSEQQATHYVSAYWTMAMIGRFAGSALLARFSPSRLLAIFALVNVGLL
                     VTTMLSSGNVALYSVVAIGLFNSIMFPTIFALSIERLGPLTNKGSSLLIMAIVGGAVV
                     PYLQGVLADHIGVQASFILPLLCYGYIIFYGLVGARTPASATQGG"
     gene            complement(8465..9514)
                     /locus_tag="QEL58_002638"
     CDS             complement(8465..9514)
                     /locus_tag="QEL58_002638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HDS1677092.1"
                     /translation="MNDNGSSSSKRAGKAVTVTDIARAIGVSRATVSLVLRGSPLVNV
                     DTRAKVEAELRRQRYVYNRAAANLRRRTSSSIALVINDLSNPFFAEFASGVDEALGGR
                     GYVTLLGSTGESPERQQAVLSTLMEHTPAGLILSPAEGSDTAQLRQALGANANVLLFN
                     RELEGADWDFLTLDNQHGAYLATRHLIERGHRQIAFFGGHAASSSCHQRRAGFQQALA
                     EAGLSLPPGWMIESAPNRLEAAARTDELFADGHRPSAAVCYNDTVALGLMLGLNSRGI
                     RPGGDFAVTGFDDISEASVAVPPLTTLTADPRERGRQAAALLLQRLDEPDAPPRRTVA
                     PVQLRIRESSAARPN"
     gene            complement(9611..12076)
                     /locus_tag="QEL58_002639"
     CDS             complement(9611..12076)
                     /locus_tag="QEL58_002639"
                     /EC_number="3.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014646963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GH92 family glycosyl hydrolase"
                     /protein_id="HDS1677093.1"
                     /translation="MRPVPSAPAVPSSSRPLVRLACLLALSATPMLLQAAPAALEREV
                     NTFIGSKDDGNTFPGASAPFGLIQVSPIGSHYSGWRYDDDKIRGFGHSFISGAGCWEQ
                     GGQVSVLPVTGSIGPGGDFDTANPKQFDHKAYAASYSHDGEVGQAGYYKVRLTSYGGI
                     DAETTARTRAAAERYTFSQRQGDGHVLVNVGQANERHSVIGSVVDVVGDRVVEGKLVT
                     KSFCGGHQYTTWFRIEFDRPFKAHGTWGEGGGLPGARHSMEGEQKPNGAWLSFDLAKG
                     QSVTAVSAISHVDAEGARINLRADGMQGGALLGFDRMRALSQQAWREQLGRVRVQGGN
                     ADDRAVFYSAVYHALLQPMTGNDADGRYRGYDDGIHRADGWTYYEYFSLWDTYRAQNQ
                     WLALTRPDVARDIGRTLLAIDEQGGWLPRWGYANFETNIMTGDPVTPFMVDLWRFGAL
                     KGRESQAWDALRRNAFGTPPLNSRMAGRSGNPTYLDKGYVVYDRAFPSKGMDVDPHHG
                     GSATLEYALADCALSQMADGLGHAQDAATLRERGRNWRKVWDPQVRDAETGFTGFPRP
                     RTEDGQWYTPADGHYSPRSHHGFHEGTAWQYQWLAQQDVPGLVEAMDGREQAGRRLDA
                     FFAMDALQADPLNAARKEWVVGPYSYYNQFRYNPNNEPDLHSPWLYTLIGQPWKTAAV
                     VRAAQQLFTNAPNGVTGNDDLGTMSAWYLFSAIGVYPAVPGSGQFLLHTPRFSKVEVD
                     MGNGRTLRIDAPGADGRRLQYVQGVKVDGQAHAPVWLDWNRLQQGPRLQFALDAKAPE
                     QGWGTAVKDLPVSWCAAPGSQLR"
BASE COUNT         2100 a         4252 c         4042 g         1944 t
ORIGIN      
        1 cccaaccggc caacccacgg aatctgcttc tgacgcaagc cacgaggggc tcagccgttg
       61 gccgaatcca gtaaaatcga cggcatgaac gcccccacct tcccctacga caccgcgcgc
      121 ctgagcgaac tggcccagct gctgatcgac aacgtccgcg aactggccca cgccggctgg
      181 accccggcca ccagcagcaa cttctcccac cgcctggatg acggccacgc ggcgatcacc
      241 gtgtccggca aggacaaggg ccgcctgatc gaggacgaca tcatggtggt ggacttcgac
      301 ggcaaggccg tcggccgccc gctgcgcccg tccgccgaaa ccctgctgca cacccagctg
      361 taccgccgct tcccggaaat cggctgcgtc ctgcacaccc attcgcccgt gcagaccatc
      421 gcctcgcgcc tgtatgcgcc gcagggccat gtgcacctgg aaggctacga gctgctgaag
      481 gccttcgccg gcaacagcac ccatgagatg gccatcgatg tgccggtgtt cgccaacacc
      541 caggacatga acgtgctctc caggcaggtc gatgacctgc tcgaccggca ggccctgtgg
      601 ggctacctga tcgatggcca cggcctgtac gcctggggcc gcgacatggc cgaggcacgc
      661 cgccacctgg aagcgttcga gttcctgttc cactgcgagc tggaactgcg caagctgcgc
      721 ggctgaaccc gcgcgcaggt gcagatgccg atccggaatc tgcgccgcgt ccccaccctg
      781 ctaccctgtc ttccccccga gacgttcaag ctgccgccat gagccgactg cgcatctacg
      841 acgacacccg ccccgaatcg ccgctgctgg acagccagga cggtgcgatc atcgctgccg
      901 aactgcagaa gatcggcgtc accttcgagc gctggcaggc caccgcgccg gtcgcgccgg
      961 gtgccagcca ggatgaagtg ttcgccgcct accgcgccga catcgaccgc ctggtcgcag
     1021 agcgcggctt caagagcgtg gacgtggcct cgatcgcccc ggacaacccg aaccgcgccg
     1081 aactgcgcaa gaagttcctc gacgaacact tccacaagga agacgaggtg cgcttcttcg
     1141 tggccggctc gggcctgttc accctgcacg tgggtgacaa ggtctacgag atcgagtgtg
     1201 tgaaggatga cctgatcgcg gtgcccgatg gcaccaccca ctggttcgac atgggcgacg
     1261 agccgagctt cgtggcgatc cgcttcttca ccgagccgga tggctgggtc ggtcacttca
     1321 ccggcaccga catcgcgcag aagttccccc gttacgtacc cacccaggcg tcctgatcca
     1381 tgcagccccg cgtcatcctg accgacatcg aaggcaccac cagcagcatc tcgttcgtca
     1441 agaacgtgct gttcccttat gcccgcaagg cgttgcctgc cttcgtggcc gagcatggcc
     1501 agcagccgga ggtccgccgc tggctggatg cggtggccag cgagatcggt ggcgcctgcc
     1561 aggacagcct ggtggccgag acgctgcagg gctggatcga ccaggaccgc aagcacaccg
     1621 cgctgaaggc gctgcagggc atgatctggg acgaaggcta ccgccgcggc gactacaccg
     1681 cgcacttcta cccggaagtg gcgccggtgc tgaacggctg gcacgcctcc ggcctgccgc
     1741 tgtacgtgta ctcctccggc tcggtaccgg cgcagaaact gttcttcggc ttcagcgatg
     1801 ccggtgacct cagcccgctg gtgtcaggct ggttcgacac cgaagtgggc ggcaagcgtg
     1861 aggccgacag ctatcgccac atcgtgcagg cgatcggcgt gccggcgggt gagatcctgt
     1921 tcctgtccga cgtggtcgaa gaactcgacg cagcccgcga agccggcctg cagacccgtc
     1981 tgatcgaccg cctggacgac tacccgctgc cgcgcaccgg ccaggccgcc aacggccacg
     2041 agcgggtcga gaacttccag cagatccagc tgtaaagcgc ctggtagatg ccaaccttgg
     2101 ttggcatgct tcgggagtgc caaccaaggt tggcacctac caaagcggcg aggttggcgt
     2161 cgtgcaaggc gggatgcacc gccctcaacg atcgttgagg gtcttcagct tcagcgcttc
     2221 gcgcaaggca gccagatcca ctgggccgcg tacggcgata tcgcgggttt cccccggcaa
     2281 caggtccagc aggttgtctt cgacctgcac gtccagcgca ccgaagtcga tccacgccgc
     2341 ccgtacatac gtcgcgctct ccagccgcag gcgatagtgg tcgccctcga tgctcagggc
     2401 ggccttcagc ttctgtcgcg gtaactgctg gtccttggct tcgacgaagc caaccacctg
     2461 ccgcgcgctc accctgccgt cccgcagcag ctcgaatacc gcaaccgtgc gcttcggatc
     2521 ggcgccggcc agcagttcgg catcgctgta ggtgccgatg tcggtgacgc cggcagcggc
     2581 aagcgtcacc gcctgctcgc gacggcgcag caccttgccg tccacgtcca tcacccgcag
     2641 ccgccagcgc gcatccagcg cggcgccatc attgagcagc cccacccgcg tacggccctc
     2701 gtcgcgcagc gcggccacgg tgaccggcgc gaagaagcgc cgcgcggcga aatgcagcgc
     2761 cttccagcgg ccgaagtagt ccacgctgga ccacgaagcc cccggccaga catcgttgag
     2821 ctgccagtac agcgaaccca tcgtgtacgg ccgcgaggcg cgatgatgca gtgccgccag
     2881 tgcaatgcca tcggcctgca tcacctggct caggtaaacg aaatcctcga agtccttcgg
     2941 cgtaccgtag cccagctcga tgtagtgcag caggcggctg ttgccctcgc cggccatgaa
     3001 tttctggtgc gcgcggatca ccgggctgtc gatgcgctgc tcggcgcggg tggcgatctg
     3061 gtccacggtc gccaccgacg gccacgcctg cagtccgtac tcggacatga agcgtggggt
     3121 ctcgcgcagg taggcctgca ccggcaatgc cggattgccc cagacctgcc agtagtgctt
     3181 gtcaccacgg gtcgagtcgt tggccttctc gtcaaggtca ttgctgggcg agctggacca
     3241 gtacggtacg cccagccctt cctcgccgac cacctggcgc aggtcgttgc cgaacaggtc
     3301 gacatagccc tgccagacct tcgccgcaaa tgccgggtcg gccgccttca ggtcgcggcc
     3361 atggccccag tccttccagg cggtctcttc ctcgttgttg ccacaccaca gcacgatgct
     3421 ggggtgatgc cgcaggcggc gcacgttgtc gcgtgcttcg gccaccacgc tggcacggaa
     3481 cgccggatcg tagcccggtt gcatgccacc gccgaacatg aagtcctgcc acaccagcag
     3541 gccgagttca tcggcgatgt cgaagaacgc atcgtcctcg tagtagccac cgccccagtt
     3601 gcgcagcatg ttcatgttgg catcgcgggc cgccgtcaac acctggcgca gtcgcgccgc
     3661 atcgacgcgt gcggggaacg cgtcgaacgg gatgacgttg gcacccttgg cgaagatcgg
     3721 cacgccattg atgacgaaag cgaagccctg cccgcccttg ccgtcttgct cgcggcgcag
     3781 ttcgaccgtg cgcaggccga tgcgctgctc gcgcgccagt accgctgtgc tgccgtcgtc
     3841 aaggcgtgcc tgcacggtgt aacggtcctg cgcaccatga cccaccggcc accagcgctg
     3901 cggcttggtc agctcaaccg gcagctcaac ggtgttctgg ccgggcatca gcggcaccgt
     3961 gcgttgcacc tgggccacgc tgcggccctg cggatcgcgc acctccacat gcaccacggc
     4021 cgagcccgac accgccccct gctccacctg cagcagcacc gccagcttcg cctgctgggc
     4081 gtccagtgca tccgtacgca cggccagatc ggccaggcgg tgtgcgtccc aggcctgcag
     4141 gtcgacgcca cgccagaccc cggcggtgac ataacgcggg ccccagtccc agccgaagtg
     4201 gtgggccggc ttgcgcgcga agttgccgac catcgcgtcc ttcggctcat caccataggg
     4261 cgacggatag ttgccagcaa tcttgtgcgc catggtctgc acgcccggca gcagcgtgcg
     4321 gatcggcgaa cggaacacga tctgcagctc attgcccttg gcccgcagcc ggccctccac
     4381 gcgcgcgcgc caggtgcgat gcgcattgtc cgcacgcagc agcggcttgc cgttgaggcg
     4441 gacctccgca taggtatcga gaccgtcgaa gcgcagctcg gcattcggcc tggccagcgt
     4501 cgccgcatcc acgtcgaagc gggcgcggta ttcccagtcg gccaggccaa tccattgcag
     4561 ctcggcttcc ggcgcaccga cgtagggatc gcggatcagc gcatgggcca gcagatcggt
     4621 gtgcacgctg cctggcacct tcgccgcgcg ccactgctgc aggcccggat gggccgcacc
     4681 ctgcgcatcg ccaggcagca tgcggaactc ccactgcgcc tgcagcgggg ctgcagttgc
     4741 cgggaagacg gaggctgcga tcagcagcag gagcagacgg acaacgaggg aaaggcgatg
     4801 cacgtaatgc tcctgttctt gcgccgagcg aggcctggcg ctaccgattc catttcatcg
     4861 cgcctcagcg cacgacgttc aacacttcgt agcaggcacc catggtgtgg taatccacct
     4921 tgccggccgg gcttttctcg tcactgtact tgcggttgtc ggcatcgagg atgcggaacc
     4981 aggcaccgta ccggtggtcg acgaagtgct cccacgaata cgcccagagg cggtcgtacc
     5041 actgccagta gcggtcatcg ccggtgcgcc tggccatcag tgcggcggtg gccagggtct
     5101 cggcctgcac ccagaagtat ttgtcgtcgt cgcagacaaa actgtcgccg ccgatcgggg
     5161 cgccgtccat gccgggctgc cggcgcgctt ccggcgcgaa gccgtagtac aggccacccc
     5221 gggcgtcgtc ccagctgcgc gccacggcca cgtcgaacag gtgctgcgcg gtcggaacca
     5281 gccaatcggc ctgcacgtgg cgatcgagga tcagcagcag cttggcccac tcggtctggt
     5341 ggccgggctg gaagccccac gggcggaaca ggtgcttggg gtcgtccaga ttgtaatccc
     5401 agtcgatctc ccagttcacg tcgtagtgtt cccagaccag cccaccggcc ttggcggcct
     5461 ggcggcgggt catgttgtcg gccagcagca gcgcgcgctc gacatagcgc tgttcgccac
     5521 tggcctcgaa cgccgccagc atcgcctcgc acatgtgcat gttggcgttc tggccgcgat
     5581 agccggtgaa gttccactgg ccatcagcct cgtccttgta caggccgtgc tgcggctccc
     5641 agaagcgcgc ttccagcagc tgccaggtct cgtccatcca ctcgcgggcc tgctcgatgc
     5701 cggccttcag cgcgcagctg taggccagca gcacgaaggc cacgccatag cagtggttca
     5761 tgtcgtcctc gaccttgcca tcgcgcaggg tccaggcata gccgccggtg gccgggttgc
     5821 ggtgcacctc acgcaggtag cgcacgccgt gctcgaccgc ctcgcgatat tcggcattgc
     5881 cgaactcgcg gtaggccatc gcgtagttga agacgaagcg ggtgctgctc accaggtggc
     5941 gatggctggc atcgtagatg ctgccgtcgt cacggaagta gtggaagaag ccaccgttcg
     6001 gatcgatgca gcgcgggtgg tagaacgcca tcgtgtcggc gatgtgcgca cgcaggaacg
     6061 cgggtgaacg gaagtcgggc gaggtgctca tgcggtaatg tcctgggcct gcagcagctg
     6121 ctgcacttca tcaagcgagg gcatcgcggc gaacgcgccc ttgcgggtaa ccgccagcgc
     6181 accgactgca gcgccgaagc gcagcgtggc ggtgatcgcc tccgggtcct tgcagaaggc
     6241 ggcgaaacct gcgcccgccc caccccgctc gagcaggccg accagcacgc caccgacgaa
     6301 ggcatcaccg gccgcggtag tgtcgacggt ggccacgcgg aagctggtga ccgtgccgtg
     6361 gttgtcgcgg gtgtaccagt gcagcgtggc tgcaccatcg gtgacgatga cccagcgtgc
     6421 ctgcgcggcc agcaggcgcc gcagcaccgt cgcctcgcca tcggcgccca gcggagctgc
     6481 caggtaatcc agttcctcgc gcgacagctt gaccaggtcg gcgcgctcca gcgcctgcca
     6541 caggcgcggc gtcggatcga cgtcggcagg ccacagtgcc gggcgcagat tcagatcgag
     6601 actgaccacc gcaccggccg cgcgcgcgcg atccatgccg gcgaaggtcg cctcggcgat
     6661 ggccggctcg gtcaggctgt tggagcagac gtggaagcac tgcgcgctgt cgaggcatgc
     6721 ggcctggaaa tcgctgtcac ggaacagcag atcggccgcc ggcgggcggt agaaactgaa
     6781 gctgcgctcg ccgctggcgt cgagggcaac gaaggccagt gcggtcttcg ccgcatcggt
     6841 acgcacgatg taatccgtgc ccacgccgtg ctcgaccagg ctgtcggcca ggaagtcgcc
     6901 gaacatgtca cggccgagca tgccgacgaa ctgcgtcttc gcacccagcc gtgcggcggc
     6961 gacggcgacg ttggccggcg caccgccggc gtactgcagg aacgcgcgcg gggtatcggc
     7021 cgaggccggc agctgcgcta gtagatcgat caaaatttcg ccgaagcaaa cgatggcacc
     7081 cattccggac tcagcctccc tgcgttgcgg aggccggcgt acgcgcgccg accagtccgt
     7141 agaaaatgat gtagccgtag cacagcagcg gcaggatgaa gctggcctgc acaccgatgt
     7201 ggtcggccag cacgccctgc aggtacggca ccacggcacc gccgacgatg gccatgatca
     7261 gcaggctgga acccttgttg gtcagcgggc cgaggcgctc gatgctcagt gcgaagatgg
     7321 tcgggaacat gatcgaattg aacaggccga tcgccaccac cgaatacagc gcgacgttgc
     7381 cggagctcag catggtcgtg accagcagcc ccacgttgac cagcgcgaag atcgccagca
     7441 ggcggctggg cgagaagcgc gccagcagcg ccgaaccggc gaagcggccg atcatcgcca
     7501 tcgtccagta ggccgacacg tagtgcgtgg cctgctgctc gctgaagccg ccgatgttcg
     7561 gcatcgacag gtagttgacc aggaagctgc cgatcgacac ttcggcaccc acgtagaaga
     7621 agatgcccag cacgcccagc aacaggtggc gcttgcgcag cgcatccagg tagctgtggt
     7681 ggtggccctg gtcggcctgc tcggtggcat cgctcaacgc cggcagtcgg aacaggaaca
     7741 cgaacagcgc cagcagcacc agcgccaccg ccaggcacac gtacgggccc tgcacggcct
     7801 gcgcctcggc ggcacggtag gccagctgct cggcggccgg cagtgccgcg atgtcatcgg
     7861 cactcttcac cgtgttggac aggatcagca tgccgccgaa gatcggcgcg atggccgtgc
     7921 ccagcgagtt cagcgcctgc gccagggtca ggcggctgga gctggtctgt tccgggccca
     7981 gcagcgccac gtaaggattg gcagcgacct gcagcacggt gatgccgctg gccagcacga
     8041 acagcgcgcc gaggaaggcg ccatacacgc gcagctcggc cgccggccag aagcccagcg
     8101 cgccgatgcc ggcgatcacc aggccggcca cgatgccctt cttgtaaccc agcgcggcga
     8161 ccaaccggcc cgccggcagc gacatcagga aataggtgcc gaagaaggtg aactgcacca
     8221 gcatcgcctt ggcgtagttc agctcgaaca ccgccttcag gtgcggaatc aggatgtcat
     8281 tgaggcaggt caggaagccc cacatgaaga agatcgtggt gaccacggcc agcgccttgc
     8341 cgttggtgac ggcgggtgcg ttgcccgaag aacccgatgg acggggcgtt gcggagatcg
     8401 gcatgcggta cgcgcctcga tgcgcggaag gtcgttgttg cgtggaaggg gtgtatggaa
     8461 ggaatcagtt cggtcgtgcg gcgctgcttt cacggatgcg cagctgcacc ggcgcgaccg
     8521 tgcgccgtgg cggcgcgtcc ggttcgtcca gccgttgcag cagcagagcg gcagcttgcc
     8581 ggccccgctc gcgcggatcg gcagtgagcg tggtcaacgg cggcaccgcc accgacgcct
     8641 cggaaatatc atcgaaaccg gtaacggcga agtcgccacc cgggcggatg ccgcgcgagt
     8701 tcaggcccag catcaggccc agcgccacgg tgtcgttgta gcagaccgcc gcactgggac
     8761 gatggccatc ggcaaacagc tcatcggtgc gcgccgcggc ttccaggcgg ttcggtgccg
     8821 actcgatcat ccagcccggc ggcagcgaca gaccggcctc ggccagcgcc tgctggaaac
     8881 cggcgcggcg ctgatggcat gaactggagg cggcatggcc accaaagaac gcgatctggc
     8941 gatggccgcg ctcgatcagg tggcgggtgg ccaggtaggc accgtgctgg ttgtccaggg
     9001 tcaggaagtc ccagtcggca ccttccagtt cgcggttgaa cagcagcacg ttggcgttgg
     9061 cacccaatgc ctggcgcaac tgcgcggtat cacttccttc ggccggcgac aggatcaggc
     9121 cggccggggt gtgctccatc aacgtggaca gcaccgcctg ctgccgctcc ggcgattcgc
     9181 ccgtgctgcc gagcagggtc acataaccgc gtccgcccag cgcctcgtcc acgccggacg
     9241 cgaattcggc gaagaacggg ttggacagat cgttgatcac cagcgcgatg ctcgacgagg
     9301 tccgccggcg caggttggcc gccgcgcggt tgtagacata gcgctggcgg cgcagttcgg
     9361 cctcgacctt ggcccgggta tcgacgttga ccagtggact gccgcgcagc accagcgaca
     9421 cggtggcccg cgacacgccg atggcacgcg cgatgtcggt caccgtcacc gccttgccgg
     9481 cgcgcttgct ggaactgctg ccgttgtcgt tcatcgtctt cccggactcc gctggaggct
     9541 caagcctaat ggatcagggc cgtgtcgtgc cgtgccgttc gctgggtcac cgcgaacggc
     9601 acagtccggc tcagcgcagc tggctgcccg gtgccgcgca ccaggacacc ggcaggtcct
     9661 tcaccgccgt gccccagccc tgctccggcg ccttcgcatc cagcgcgaac tgcaggcgcg
     9721 ggccctgctg caggcggttc cagtccagcc ataccggcgc atgcgcctgg ccatcgacct
     9781 tcacgccctg cacgtactgc aggcgccggc catccgcacc cggcgcgtcg atgcgcaggg
     9841 tacggccatt gcccatgtcc acttccacct tgctgaagcg cggggtgtgc agcaggaact
     9901 ggccgctgcc cggcaccgcc gggtacacgc cgatggcact gaacaggtac caggccgaca
     9961 tcgtgcccag gtcatcgttg ccggtcacgc cgttcggcgc attggtgaac aactgctgcg
    10021 cggcacgtac caccgccgcg gtcttccacg gctggccgat cagcgtatac agccacggcg
    10081 aatgcaggtc cggctcgttg ttcgggttgt aacggaactg gttgtagtag ctgtacggcc
    10141 cgaccaccca ctccttgcgg gcggcgttga gcgggtcggc ctgcagcgca tccatcgcga
    10201 agaacgcgtc gaggcggcgg ccggcctgct cgcggccgtc catcgcttcg accaggcccg
    10261 gcacgtcctg ctgcgccagc cactggtact gccatgccgt accttcatgg aagccgtggt
    10321 gcgaacgcgg gctgtagtgg ccatcggccg gcgtgtacca ctggccatcc tcggtgcgcg
    10381 ggcgcgggaa gccggtgaaa ccggtctcgg catcacgcac ctgcgggtcc cacaccttgc
    10441 gccagttgcg gccgcgctca cgcagcgtcg ccgcatcctg ggcgtggccg aggccatcgg
    10501 ccatctgcga aagcgcacag tcggccagcg cgtactccag cgttgccgaa ccgccgtgat
    10561 gcggatcaac gtccattccc ttggacggga acgcacggtc gtagaccacg tagcccttgt
    10621 ccaggtaggt cggattgcca gagcggccgg ccatgcgcga gttcagcggc ggcgtaccga
    10681 aggcattgcg gcgcagcgca tcccacgcct gcgattcacg gcccttgagc gcaccgaagc
    10741 gccacaggtc gaccatgaac ggcgtgaccg gatcgccggt catgatgttg gtctcgaagt
    10801 tggcatagcc ccagcgcggc agccagccac cctgctcatc gatcgccagc aaggtgcggc
    10861 cgatatcgcg tgccacgtcc gggcgggtca gtgccagcca ctggttctgc gcacggtagg
    10921 tatcccacag cgagaagtac tcgtagtagg tccagccatc ggcgcgatgg atgccatcgt
    10981 catagccacg gtagcggccg tcggcatcgt tgccggtcat cggctgcagc agcgcgtggt
    11041 agaccgcgct gtagaacacg gcgcggtcgt cagcattgcc gccctgcacg cgcacccgtc
    11101 ccagctgctc gcgccacgcc tgctgcgaca gcgcgcgcat gcggtcgaaa ccgagtagcg
    11161 ccccaccctg catgccgtcg gcgcgcaggt tgatgcgcgc gccctcggcg tccacgtgcg
    11221 agatcgcact gactgcggtc accgactggc ccttggccag gtcgaagctg agccaggcac
    11281 cattcggctt ctgctcgcct tccatgctgt ggcgcgcacc cggcaggcca ccgccctcgc
    11341 cccaggtgcc atgcgccttg aacgggcgat cgaactcgat gcggaaccat gtggtgtact
    11401 gatgaccacc acagaagctc ttggtgacca gcttgccctc gaccacgcgg tcgcccacca
    11461 catcaaccac gctgccgatc accgaatggc gctcgttggc ctggccgaca ttgaccagca
    11521 catggccgtc gccctggcgc tggctgaagg tatagcgctc ggcggcggcg cgggtacgtg
    11581 cggtggtctc ggcatcgatg ccgccgtagc tggtcaggcg caccttgtag tagccggcct
    11641 ggccgacctc gccgtcgtgg ctataggacg cggcgtaggc cttgtggtcg aactgcttgg
    11701 ggttggcggt atcgaaatcg ccaccggggc cgatcgagcc ggtcaccggc agcaccgaca
    11761 cctggccgcc ctgttcccag cagccggcgc cggagatgaa cgaatggccg aagccgcgga
    11821 tcttgtcatc gtcatagcgc cagcccgaat aatgactgcc gatcgggctg acctggatca
    11881 ggccgaacgg tgccgacgcg cccgggaagg tgttgccgtc gtccttgctg ccgatgaagg
    11941 tattgacctc acgctccagc gccgccggcg cggcctgcag cagcatcggc gtggccgaca
    12001 gggcgagcag gcaggccagg cgcaccagcg ggcgcgaaga cgatgggacg gcgggagcgg
    12061 acggcactgg acgcatgtcg ggttcctgta gtcgatgaca cggaggcaga cggtgcgggc
    12121 cgtccggcac cgttccaccg agctctgcct ttgaccggca gacagcttcc cctggaatga
    12181 cgcgcgaccc gttgaaccgt gaatttagat cgattcaagt agagcatgcc gattccgccg
    12241 aatgcattct gcgccgcagc atgagggggg gtgtttggca gggctgcgcc ctgcacctgc
    12301 tggtagtgcc ggccgctggc cggcgacagc aacaacaa
//
LOCUS       DAOKIP010000118        12281 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.118,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000118 DAOKIP010000000
VERSION     DAOKIP010000118.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 12281)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12281)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12281
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.118"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..260)
                     /locus_tag="QEL58_002640"
     CDS             complement(<1..260)
                     /locus_tag="QEL58_002640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003471049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAAR domain-containing protein"
                     /protein_id="HDS1677094.1"
                     /translation="MSRMLIVVGDALQTGGSVLTGSPHTDIEGRAVARVGDRVMCARH
                     GPGSIVTGDSTLVIDGQPVARDGDKASCGCALMAGRQQRAHVV"
     gene            473..2173
                     /gene="mqo"
                     /locus_tag="QEL58_002641"
     CDS             473..2173
                     /gene="mqo"
                     /locus_tag="QEL58_002641"
                     /EC_number="1.1.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012479432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate dehydrogenase (quinone)"
                     /protein_id="HDS1677095.1"
                     /translation="MKKFGKALLALLVLLLLAAALFLYWPLTQRSVPAASNDKPVDVV
                     LVGAGIMSITLATYLQELQPDWNIQVYERLDGVAGESSDGWNNAGTGHSAFAELNYTP
                     ELPDGSIETKRAVGIAESFEVSRQFWSHQVKEGRLSQPSDFINPTPHMSFVWGDDNIA
                     YLHKRQQALVKNPLFYGMQYSEDPRQIQQWAPLLMEGRDPKQKVAATWMPLGTDVNFG
                     VITRQLTTGLQRSPNFSLHLNHEVSALRQNADKSWNVTVKDLKAGTEATTHARFVFIG
                     AGGAALKLLQMSGIPESKDYAGFPVGGQFLAFQGQDVTSRHGVKAYGMAETGSPPMSV
                     PHLDARKLDGKPVVLFGPFALYSTKFLKHGSWWDLYSSVTHNNVGPMLEVGKDNLDLV
                     QYLMGQARLNDADRQAELVKYFPNAKPGDWKLVTAGQRVQIIKRDPLKGPVLQFGTEI
                     VTDKDHTIAALLGASPGASTSPPIMLDLMAKAFPEQMKAGWETRLREIVPSYGRKLND
                     SAALVNEIRTLTSQTLHLPYLEVPVDANAAAPAPAAVPAPVPAPAKEKRNANEELQAL
                     "
     gene            2437..4629
                     /locus_tag="QEL58_002642"
     CDS             2437..4629
                     /locus_tag="QEL58_002642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent siderophore receptor"
                     /protein_id="HDS1677096.1"
                     /translation="MSPNPHDRLPRRALLPAALLSSLALLSAPSAFAAADGAADAKTL
                     DRVSVRAEQSAPPSSSTRLPITLQETPQSATAISLQRLQDESLFSINDVMRTVPGVSV
                     SFFDTQRPLYYARGFAITDFQVDGIPTYSGSTNQEYDTAFYDRIEVIRGANGLLSGAG
                     VPSATVNLLRKRPGKDFDASFSVSAGSWDYRRMQADVTAPLTDDGRFRSRVVAAYTDR
                     GLYYDRYDETKMAGMAVLEGDITDSTTLTLGYQSQDNNPTGSTWGTVAFFDNQGNFAH
                     LARSTNLSPKWSYWKRESNTAFANLEQRFGEDWLLKINTAYTRGNVQNVRLYGTGYPD
                     PNSGAGIYLRAAAGDSKDTRRNVDAYLTGTFPLFGRDHALTVGAQWSDLEGTTNTVAL
                     NFPGDWATCGRERCYYIPNVFNWDGDISEVTYSRTGARRVAKTTQSGVYLATRLRLAD
                     PLSLIAGARLSRWQTLSRSYNAAGAYTGTSGAYKVSDEVTPYVGLVYEITPNVSAYAS
                     YTEIFNPQNYKDRNENLLAPVQGSNLEAGIKTQWFDGRLTANAAVFEAKQDNYAVRDM
                     SVPEGTLSDGSSAYIGINGTKARGWEMDVNGEILPGWTVNAGYTHVKVTRAATDLLYA
                     NPPENLLQLNTQVQLRGALDRLSIGGGLQWQSRVQGYNIAYPLGGTVTVNQPAYSLVQ
                     FNANYRISDNWTATLSVRNALDKTYWANLDYNNFGEPRFVAASLRWKF"
     gene            4820..6463
                     /gene="mdcA"
                     /locus_tag="QEL58_002643"
     CDS             4820..6463
                     /gene="mdcA"
                     /locus_tag="QEL58_002643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007963345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malonate decarboxylase subunit alpha"
                     /protein_id="HDS1677097.1"
                     /translation="MNPSWDTLQRSRRVRLERASRWARGHEVAAADIGELLHALLEPG
                     DKVCLEGNNQKQADFLAQALAGLDPARIHDLHMVQSVLSLPSHLDVFERGIASRLDFS
                     FSGPQSVRLANLVAEGRIQIGAIHTYLELFGRYFIDLTPRVALVAAQAADRYGNLYTG
                     PNTEDTPVIVEATAFGGGIVIAQVNEIVDTLPRVDIPADWVNFVVQAPRPNHIEPLFT
                     RDPAQISEIQVLMAMMAIKGIYAEYGVNRLNHGIGFDTAAIELLLPTYAESLGLKGKI
                     CQHWALNPHPALIPAIESGFVRSVHSFGSELGMEKYIAARSDVFFTGADGSMRSNRAF
                     SQTAGLYACDMFIGSTLQIDLQGNSSTATRDRIAGFGGAPNMGSDARGRRHASDAWIK
                     AGQQAARPGEMPRGRKLVVQMVETFREHMAPAFVERLDAWELAERAGMPLPPVMIYGD
                     DVSHVLTEEGIANLLLCRTPEEREQAIRGVSGYTAVGLGRDRAMVENLRDRGVIRRPE
                     DLGISVRDASRDLLAARSVKDLVRWSGGLYDPPKRFRNW"
     gene            6474..6794
                     /locus_tag="QEL58_002644"
     CDS             6474..6794
                     /locus_tag="QEL58_002644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004147942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malonate decarboxylase acyl carrier protein"
                     /protein_id="HDS1677098.1"
                     /translation="METLDYRFEGRTPVQFPRAAVLVGVLASGNLEILLEPAELEGAM
                     SVRIVTAAQGFGRVWEAVIGDFAHRHPLRDVRISINDAGATPAVVSLRLDQAVETLLA
                     GGTP"
     gene            6791..7699
                     /locus_tag="QEL58_002645"
     CDS             6791..7699
                     /locus_tag="QEL58_002645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014646338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin-independent malonate decarboxylase
                     subunit beta"
                     /protein_id="HDS1677099.1"
                     /translation="MSHVQRHSYYEADARERIAGLVDAGSFREFLGPARRMMSPHLAQ
                     LDQPAAFDDGIVVGEATLRGKRVLLAAQQGEFMGGGVGEVHGAKLTGLLRRAAATRPD
                     GVLLLLDTGGVRLHEANAGLIAISEIMRATLDARAAGVPVVALIGSGNGAFGGMGIVA
                     RCCSTVIMSEEGRLSLSGPEVIETVRGVEEFDSRDRALVWRVTGGKHRYLIDQAQVLV
                     PDAIGAFAQAAFDALLVDTASTDADAALNALQARHAALKARVQAWGGCRDGLEIWSLL
                     GITEPERLPLLDTDDFLAVTADRSLP"
     gene            7702..8406
                     /gene="mdcE"
                     /locus_tag="QEL58_002646"
     CDS             7702..8406
                     /gene="mdcE"
                     /locus_tag="QEL58_002646"
                     /EC_number="4.1.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007962423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin-independent malonate decarboxylase
                     subunit gamma"
                     /protein_id="HDS1677100.1"
                     /translation="MPLRALLDALFPRGHAVAVEDSVLTGTASTDDGEVTVIGTADKL
                     EVGVDHALALAETVLASTAAHPHRPIVMLVDTAGQRLARRDELLGINGCFAHLAQTLD
                     LARRRGARLVTLVYGESVSGGFLSFGLMADHIHALPDAQVRVMDLRAMARVTKQPLEK
                     LQALSQSSPVFAPGVENYVAMGAVDSIWSGDLAAHLLQALRTPTDGDRRAVRGAERGG
                     RRLAAAVATAVSQGDA"
     gene            8399..9040
                     /gene="mdcG"
                     /locus_tag="QEL58_002647"
     CDS             8399..9040
                     /gene="mdcG"
                     /locus_tag="QEL58_002647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019336980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malonate decarboxylase
                     holo-[acyl-carrier-protein] synthase"
                     /protein_id="HDS1677101.1"
                     /translation="MPERLPRHTLVWLSAHAAWQADIAPHEPRLANWFAQGLPAIVAR
                     RAADDADPRLRLGVPLPPAEGKLRLALRVPARDVLRSAPPPSLHTVLEGNVAQDWQRP
                     LQALHGIAAAHVFGAFAWQHLTGLHYVHARSDIDLLWQINSSAQADALVARLQAWETE
                     HGRRVDGELCLAGDAAVNWREYAGRSREVLVKRHDGAALELRESVFAPAGVTA"
     gene            9037..9894
                     /gene="mdcB"
                     /locus_tag="QEL58_002648"
     CDS             9037..9894
                     /gene="mdcB"
                     /locus_tag="QEL58_002648"
                     /EC_number="2.4.2.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004147910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="triphosphoribosyl-dephospho-CoA synthase MdcB"
                     /protein_id="HDS1677102.1"
                     /translation="MSAVAQPTVRPAAAADSARLGRLAVASLHAELALAPKPGLVTPF
                     DSGSHHDMDAGTFLRSLFALRHYFAAVAHLGAAGADFDALRRCGIAAEAAMLRATAGI
                     NTHRGAIFSLGLLVAAAAACRSRLGHATSGERVCLEVRRWAGHFAHAPLDAGSPGQRA
                     RVRHNVPGVREHAAAGYPLLREVALPTLRHALANGLSREAAMCHTLMQLVAHTEDLNL
                     LHRGGAEGLRWARQQAHRFLADGGAFAHDWRPRLRQIADAFVVRRLSPGGSADLLACS
                     VFLLHQEGS"
     gene            9891..10811
                     /gene="mdcH"
                     /locus_tag="QEL58_002649"
     CDS             9891..10811
                     /gene="mdcH"
                     /locus_tag="QEL58_002649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010483421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malonate decarboxylase subunit epsilon"
                     /protein_id="HDS1677103.1"
                     /translation="MSLALLCPGQGAQHPAMFDRVRGLAAAQPLLDAIGELLGRDVFA
                     AAAADDRFDNVQAQPLLCAASLAHWQGLREVLPTPTVIAGYSIGELAAHAIAGSFDTT
                     TCLALSAQRARLMDAASPRDAGLQAVLGLDRDATQRLCDTHGAFIAIANGHDHFIVGG
                     AQPSLHALAADAQACGAEIRPLPVHVPAHTPLLAGAEAPFAAALRAAQVHAPRLPLLA
                     GVDARPVRDGAAVVHTLSAQLAQTIEWAQVMRQAFERGARVFLQLGPGSALARMVAPS
                     YPCCEVRAVEEFQSLEGAAAWVRSALERLQ"
     gene            10916..>12281
                     /locus_tag="QEL58_002650"
     CDS             10916..>12281
                     /locus_tag="QEL58_002650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010379550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677104.1"
                     /translation="MSPQIATIIGLVIMFIVATAMPINMGAVAFALAFIIGGLWVDMG
                     GKEVLAGFPGDLFLTLVGITYLFAIAQKNGTIDLLVHWAVKAVRGHIVAIPWVMFVIT
                     AVLTAFGALGPAAVAIIGPVALRFAKQYNINPLMMGLLVIHGAQAGGFSPISVYGSIT
                     NGVVQKAGLEVTEMAVFLTSLGFNLMMATICFFAFGGIALLRRGSITAAGTIGNAELA
                     MAGGPQASSRQFAIEGHGALVAAGGGTLSNDPVALDAVNLTRERLFTLIGLLGLGVAA
                     LIYNLNVGLVSITVAVALALLSPQSQKGAVDGISWSTVLLICGVVTYIGVLEHAGAVD
                     FIGNGVSDIGIPLLGALLVCYVGGIVSAFASSAAVLGATIPLAVPFLMQGHLSAAGVI
                     CALAVSSTIVDVSPFSTNGALVVASAAKEERETLFRRFLVYSGLVVALGPLLAWLVFV
                     VPGWM"
BASE COUNT         1986 a         4269 c         4015 g         2011 t
ORIGIN      
        1 acgacatgcg cccgctgctg cctgcccgcc atcagcgcgc agccgcagct ggccttgtcg
       61 ccgtcgcggg cgaccggctg gccgtcgatg accagggtgc tgtcaccggt cacgatcgag
      121 ccgggcccgt gccgggcgca catcacccga tcgccgacgc gtgccacggc gcggccttcg
      181 atatcggtgt gcggggaacc tgtcagtacc gaaccgcccg tctgcagggc gtcacctacc
      241 acgatcagca tccgtgacat cgttgcgcgg ccactccatg gccagtagtc gttgcgaatc
      301 agccgacaat cctaccgcag cgcgcacgcc aacaggatga tgcattgcac aaaaaccgga
      361 ccggttccgg ttagaatcgt ctccaggatg ccgcaaggcg ttgtttcttc acgccctttc
      421 cctgccccat gcgcatcctg aactcctccc ctccgccaac gatcccgccc ccatgaagaa
      481 atttggcaag gccctgctcg ccctgctcgt actgctgttg ctggccgccg cgctgttcct
      541 gtactggccg ctgacccagc gctcggtgcc cgccgccagc aacgacaagc ccgtcgacgt
      601 tgtgctggtc ggcgccggca tcatgagcat caccctggcc acctacctgc aggaactgca
      661 gccggactgg aacatccagg tctacgaacg cctcgacggc gttgccggtg aaagctccga
      721 tggctggaac aatgccggca ccggccattc ggcgttcgcc gaactgaact acaccccgga
      781 actgcccgac ggcagcatcg agaccaagcg cgcggtcggc atcgccgagt cgttcgaggt
      841 ctcgcgccag ttctggtcgc accaggtgaa ggaaggccgg ctgagccagc ccagcgactt
      901 catcaacccg accccgcaca tgagcttcgt ctggggcgat gacaacatcg cctacctgca
      961 caagcgccag caggccctgg tgaagaaccc gctgttctac ggcatgcagt actccgaaga
     1021 tcccaggcag atccagcagt gggcaccgct gctgatggaa ggccgcgatc cgaagcagaa
     1081 ggttgccgcg acttggatgc cgctcggcac cgacgtcaac ttcggcgtga tcacccgcca
     1141 gctgaccacc ggcctgcagc gcagcccgaa cttcagcctg cacctgaacc acgaagtgag
     1201 cgcgctgcgg cagaacgccg acaagagctg gaacgtgacg gtgaaggacc tcaaggccgg
     1261 caccgaggcc accacccacg cccgcttcgt gttcatcggt gccggtggcg ccgcgctgaa
     1321 gctgctgcag atgtcgggca tcccggagtc gaaggactac gccggcttcc ctgtcggtgg
     1381 ccagttcctc gccttccagg gccaggacgt gacctcgcgc catggcgtga aggcctacgg
     1441 catggccgaa accggttcgc cgccgatgtc ggtgccgcac ctggatgcgc gcaagctgga
     1501 cggcaagccg gtggtgctgt tcgggccgtt cgcgctgtac agcaccaagt tcctcaagca
     1561 cggctcgtgg tgggacctgt attcctcggt cacccacaac aacgtcggcc cgatgctgga
     1621 agtgggcaag gacaacctgg acctggtgca gtacctgatg ggccaggcgc ggttgaacga
     1681 tgccgaccgc caggccgagc tggtcaagta cttccccaac gccaagccgg gcgactggaa
     1741 gctggtcacc gccggccagc gcgtgcagat catcaagcgt gacccgctga agggcccggt
     1801 gctgcagttc ggtaccgaga tcgtgaccga caaggaccac accatcgccg ctctgctcgg
     1861 cgcctcgccg ggtgcctcga cctcgccgcc gatcatgctg gacctgatgg ccaaggcctt
     1921 cccggagcag atgaaggccg gctgggaaac ccgcctgcgc gagatcgtgc cgtcatacgg
     1981 gcgcaagctc aatgacagcg cggcgctggt gaacgagatc cgcacgctga ccagccagac
     2041 cctgcacctg ccgtacctgg aggtgccggt ggatgccaat gccgcagcgc ctgcaccggc
     2101 agcggttccg gcaccggttc cggcaccggc caaggaaaag cgcaacgcca acgaggaact
     2161 gcaggcgctg taagcccgca gcatcccctg tagtacacgg acggacggcc accttcgggt
     2221 ggccgttcgc gtttgcgcgg atggggcctg cccgctgcca tgcgcccgaa tggccctgcg
     2281 cattgatgag aattgtaatg ttgttaagaa ttatttacat ttgcgcactg cgcagtgacc
     2341 gcgcctctcc cagatggacc tgacgtgccc gaagccgccg ccccgggtgc tggacgactg
     2401 tgccgccctt ccccgcctcc acgcttcgag cccaccatgt ccccgaaccc gcatgaccgc
     2461 ctgccccgcc gcgcgctgct gcccgctgcc ctgctttcgt cgttggccct gctgtccgca
     2521 cccagcgcat tcgcggctgc cgacggcgct gccgacgcca agactctgga tcgggtcagc
     2581 gtccgcgccg aacagtcggc accgccgtcc agctccaccc gcctgccgat caccctgcag
     2641 gaaactccgc agtcggccac cgcgatcagc ctgcagcgcc tgcaggacga atcactgttc
     2701 agcatcaacg acgtgatgcg taccgtgccc ggcgtcagcg tgtccttctt tgacacccag
     2761 cgcccgctgt actacgcgcg cggtttcgcc atcactgatt tccaggtcga cggcattccc
     2821 acctacagcg gctccaccaa ccaggaatac gacaccgcct tctacgaccg catcgaagtg
     2881 atccgcggcg ccaacggcct gctcagcggt gcgggcgtgc cgtcggccac ggtcaacctg
     2941 ctgcgcaagc gtccgggcaa ggatttcgac gcatcgttct cggtcagtgc cggcagctgg
     3001 gactaccgcc gcatgcaggc cgacgtgacc gcgccgctca ccgatgatgg ccgcttccgc
     3061 agccgcgtgg tggccgccta caccgaccgc ggtctgtact acgaccgcta cgacgagacc
     3121 aagatggcgg gcatggcggt gctggaaggc gatatcaccg acagcaccac cctcaccctc
     3181 ggttaccaga gccaggacaa caacccaacc ggctcgacct ggggcactgt cgcgttcttc
     3241 gacaaccagg gcaacttcgc ccatctcgcg cgctcgacca acctgtcgcc gaagtggagc
     3301 tactggaagc gcgagagcaa caccgccttt gccaatctgg aacagcgctt cggcgaggac
     3361 tggctgttga agatcaacac cgcctacacc cgtggcaacg tgcagaacgt gcgcctgtac
     3421 ggcacagggt acccggaccc gaactccggc gcgggcatct acctgcgcgc tgccgctggt
     3481 gattccaagg atacgcgccg caacgtcgat gcctacctga ccggcacctt cccgctgttc
     3541 ggccgcgacc acgccctgac cgtgggtgca cagtggtcgg acctggaagg caccaccaat
     3601 accgtggcgc tgaacttccc gggcgactgg gcgacctgcg gccgtgagcg ctgctactac
     3661 atccccaacg tattcaactg ggacggcgac atctccgaag tgacctacag ccgcaccggc
     3721 gcgcgccgcg tggccaagac cacgcagagt ggcgtctacc tggccacccg actgcgcctg
     3781 gccgatccgc tgtcgctgat tgccggtgca cgcctgagcc gctggcagac cctcagccgc
     3841 tcgtacaacg cggccggggc ctataccggc accagcggcg cctacaaggt gagcgatgaa
     3901 gtcaccccct acgtgggcct ggtctacgag atcaccccga acgtctcggc gtatgccagc
     3961 tacaccgaga tcttcaaccc gcagaactac aaggaccgca acgaaaacct gctggcgccg
     4021 gtgcagggct cgaatctgga agcgggcatc aagacgcagt ggttcgatgg ccgcctgacc
     4081 gccaatgccg cggtgttcga ggccaagcag gacaactacg cggtacgtga catgagcgtg
     4141 ccggaaggca cgctgagtga tggcagctcg gcctacatcg gcatcaacgg caccaaggcg
     4201 cgcggctggg agatggacgt caacggcgaa atcctgccgg gctggacggt caacgccggc
     4261 tacacccacg tcaaggtgac ccgggctgcc accgacctgc tgtacgccaa cccgccggag
     4321 aacctgctgc agctcaacac ccaggtgcag ctgcgtggtg cgctcgatcg gctgagcatc
     4381 ggcggcggcc tgcagtggca gagccgggtg cagggctaca acatcgccta cccgctgggg
     4441 ggcacggtga cggtgaacca gccggcgtac tcgctggtgc agttcaatgc caactaccgc
     4501 atcagcgaca actggaccgc gacgctgagc gtgcgcaacg cgctggacaa gacctactgg
     4561 gccaacctgg actacaacaa cttcggcgaa ccgcgcttcg tggcggccag cctgcgctgg
     4621 aagttctaag cgacccgcga accggtgggt gcctggtggg tgccgaccgt cggtcggcac
     4681 gccctccacc acgactcacg gtcgtggcct gcctgaatgg gcccgcctgc gcgcgggccc
     4741 ttctttttgc tgcgctgcgg gttgcacacc cttccataat tatgtcgtaa ttatctcaac
     4801 gccaatcgga agccggtcga tgaacccgag ctgggatacg ttgcaacgca gccgccgggt
     4861 acgcctggag cgcgcttcgc gctgggcccg cggccatgag gtcgcggccg ccgatatcgg
     4921 cgaactgctg cacgcgctgc tggagccggg tgacaaggtc tgcctggagg gcaacaacca
     4981 gaagcaggcc gacttcctcg cccaggcact tgccggcctc gacccggcgc ggatccacga
     5041 cctgcacatg gtgcagtcgg tgctgtcact gccttcgcac ctggatgttt tcgaacgcgg
     5101 catcgcctcc aggctggact tctccttctc cggcccgcag tcggtgcggc tggccaacct
     5161 ggtggccgag gggcgcatcc agatcggcgc catccacacc tacctggaac tgttcggccg
     5221 ctacttcatc gacctcactc cgcgcgtggc gctggtcgct gcgcaggccg ccgaccggta
     5281 cggcaacctc tacaccggcc cgaacaccga agacaccccg gtaatcgtcg aggccaccgc
     5341 cttcggtggc ggcatcgtga tcgcccaggt caacgaaatc gtcgacaccc tcccccgcgt
     5401 cgacatccct gcggactggg tcaacttcgt ggtgcaggca ccgcgcccga atcacatcga
     5461 accgctgttc acccgcgacc cggcacagat ttccgagatc caggtgctga tggcgatgat
     5521 ggcgatcaag ggcatctacg ccgagtacgg cgtcaaccgg ctcaaccatg gcatcggctt
     5581 cgacacggcc gccatcgagc tgctgctgcc gacctacgcc gaatcgctcg ggctgaaggg
     5641 aaagatctgc cagcactggg ccctcaatcc acacccggcg ttgattccgg cgatcgaatc
     5701 gggcttcgtc agatcggtac attcattcgg ctccgaactg ggcatggaga agtacatcgc
     5761 cgcacgaagc gatgtgttct tcaccggcgc cgatggctcc atgcgctcca accgcgcgtt
     5821 ctcgcagacc gctggcctgt atgcctgcga catgttcatc ggctcgaccc tgcagatcga
     5881 cctgcagggc aacagctcca ccgccacgcg cgaccgcatc gccggcttcg gcggcgcacc
     5941 gaacatgggg tcggatgcgc gcggccgccg ccacgccagc gacgcctgga tcaaggccgg
     6001 ccagcaggcc gcccgtcccg gcgagatgcc acgcgggcgc aagctggtgg tgcagatggt
     6061 ggaaaccttc cgcgaacaca tggcaccggc cttcgtcgaa cgtctggatg cctgggaact
     6121 ggccgaacgc gccggcatgc cgctgccgcc ggtgatgatc tacggcgacg atgtcagcca
     6181 cgtgctgacc gaggaaggca tcgccaacct gctgctgtgc cgcacgccgg aagaacgcga
     6241 acaggcgatc cgcggcgtgt ccggctatac ggcggtcggc ctgggccgcg atcgcgcgat
     6301 ggtcgagaac ctgcgcgacc gtggtgtcat ccgccgcccc gaagacctgg gcatctccgt
     6361 gcgtgatgcc agccgcgatc tgctggcggc acgctcggtg aaggatctgg tgcgctggtc
     6421 cggcggtctg tacgacccgc ccaagcgctt ccgcaactgg taaggggctg agcatggaaa
     6481 ccctcgacta tcgattcgaa ggacgcaccc cggtgcagtt cccgcgcgct gcggtactgg
     6541 tgggcgtgtt ggcctcgggc aacctggaaa tcctgctgga gccggcagag ctggagggcg
     6601 cgatgtcggt ccgcatcgtc accgccgcgc agggcttcgg ccgcgtatgg gaggcggtga
     6661 tcggcgattt cgcgcatcgc catccgctgc gcgatgtgcg catctcgatc aacgacgccg
     6721 gcgccacccc ggcggtggtc agcctgcgcc tggaccaggc ggtggaaacc ctgctggccg
     6781 gaggcacgcc atgagccacg tccagcgcca cagctactac gaagccgatg cgcgcgaacg
     6841 cattgccggg ctggtcgatg ccggatcgtt ccgcgagttc ctgggccctg cgcgacggat
     6901 gatgagtccg cacctggcgc aactcgacca gccagccgca ttcgacgatg gcatcgtcgt
     6961 cggcgaagcc acgcttcgcg gcaagcgcgt gctgctggcc gcgcagcagg gtgaattcat
     7021 gggcggcggt gtgggcgaag tgcacggcgc caagctgacc ggcctgctgc gccgcgcagc
     7081 ggcgacccgc cccgatgggg tgttactgct gcttgatacc ggcggcgtac gcctgcacga
     7141 agccaatgcc ggcctgattg ccatttccga gatcatgcgc gccaccctgg atgcacgcgc
     7201 tgcgggcgtc ccggtggtcg cgctgatcgg cagtggcaac ggcgcgttcg gtggcatggg
     7261 catcgttgcc cgttgctgca gcacggtgat catgtccgag gagggccggc tgtcgctgtc
     7321 cgggccggag gtgatcgaaa ccgttcgcgg cgtggaagag tttgattccc gcgaccgcgc
     7381 gctggtctgg cgggtgactg gcggcaagca ccgctacctg atcgaccagg cccaggtgct
     7441 ggtgcccgat gccatcgggg cgttcgcgca ggcggcattc gatgcgctgc tggtggacac
     7501 cgccagcacc gatgccgatg ccgcactgaa tgccctgcag gcacgtcatg ccgcattgaa
     7561 agcacgcgtg caggcctggg gcggatgccg cgatggtctt gagatctggt cgctgctggg
     7621 catcaccgaa cccgagcggc tgccgctgct ggacaccgac gacttcctcg ccgtcaccgc
     7681 tgatcggagc ctgccatgag cctgcccctg cgcgcgctgc ttgatgcgct gtttccgcgt
     7741 ggccacgccg ttgccgtgga ggactcggtg ctgaccggaa ccgccagcac cgacgacggc
     7801 gaggtgaccg tgatcggcac cgccgacaag ctcgaagtgg gcgtggacca cgcactggca
     7861 ctggccgaaa ccgtgctggc cagcaccgcc gcacatcccc atcgaccgat cgtgatgctg
     7921 gtcgacaccg ccggccagcg cctggcacgc cgcgacgaac tgctcggcat caacggctgt
     7981 ttcgcgcacc tggcgcagac gctggatctg gcccgccgcc gtggcgcccg cctggtcacc
     8041 ctggtctacg gtgagtcggt cagtggtggc ttcctctcgt tcggcctgat ggccgaccac
     8101 atccatgccc tgcccgatgc gcaggtgcgg gtgatggacc tgcgcgcgat ggcgcgggtg
     8161 accaagcagc cgctggagaa gctgcaggca ctcagccaga gctcgccggt attcgcgccg
     8221 ggcgtggaga actacgtggc gatgggcgcg gtggattcga tctggagcgg cgacctggcc
     8281 gcacacctgc tgcaggcgct gcgtacgccc accgatggcg accgccgcgc cgtgcggggt
     8341 gccgaacgtg gcggacgtcg cctggccgca gcggtggcca ctgcggtgag ccagggcgat
     8401 gcctgagcgc ttgccccggc atacgctggt ctggctgtcg gcacacgcgg cctggcaggc
     8461 cgacatcgcc ccgcatgagc cgcgcttggc caactggttc gcgcagggcc tgccggccat
     8521 cgtcgcccgg cgtgccgccg acgatgccga tccccggctg cgcctgggcg taccgctgcc
     8581 gccggccgag ggcaaactgc gcctggccct gcgcgtgccg gcacgcgatg tgctgcgcag
     8641 cgcaccgcca ccatcacttc atacggtgct ggaaggcaac gttgcgcagg actggcaacg
     8701 ccccctgcag gcactgcacg gcatcgctgc ggcgcatgta ttcggtgcct tcgcgtggca
     8761 gcacctgacc ggcctgcact atgtgcacgc gcgttcggac atcgatctgc tgtggcagat
     8821 caacagcagc gcacaggccg atgccctggt tgcacggctg caggcctggg aaaccgaaca
     8881 cggccgccgg gtcgatggcg aactgtgcct ggccggcgat gccgccgtga actggcggga
     8941 gtacgcggga cgcagccgcg aagtgctggt caagcgccac gacggcgccg ccctggaact
     9001 gcgcgagtcc gtgttcgccc ccgccggggt gaccgcatga gcgccgtcgc gcagccgacg
     9061 gtccggccgg cagctgccgc ggacagcgcg cgcctggggc gcctggccgt cgccagcctg
     9121 cacgccgaac tggcgctggc gcccaagccc gggctggtca ctcccttcga cagcggcagc
     9181 catcacgaca tggacgccgg cacattcctg cgcagtctgt tcgcgctgcg ccactatttc
     9241 gctgccgtgg cccacctcgg tgcagccggg gcggacttcg atgccctgcg ccgatgtggc
     9301 atcgccgccg aagcggcgat gctgcgcgcg accgccggca tcaataccca tcgtggcgcg
     9361 atcttcagcc tcggtctgct ggtcgcggcc gccgctgcct gccgttcccg cctgggccat
     9421 gccaccagcg gtgagcgggt ctgcctggag gtacgtcgct gggcggggca cttcgcacat
     9481 gccccgctgg atgcaggcag cccaggccaa cgtgcgcgcg tccggcacaa cgtgcccggc
     9541 gtgcgcgaac acgccgctgc aggctatccg ctgctgcgcg aggtggcgtt gcccaccctg
     9601 cgccacgcgc tggccaatgg cctgtcacgc gaagccgcga tgtgccacac gctgatgcag
     9661 ctggtcgcac acaccgaaga cctcaacctg ctgcatcgcg gaggcgctga aggcctgcgc
     9721 tgggcacggc agcaggccca ccgtttcctg gccgacggcg gcgccttcgc gcacgattgg
     9781 cggccgcgcc tgcgacagat cgccgatgcc ttcgtcgtgc gtcgcttgag ccccggcggc
     9841 agcgccgacc tgctcgcctg cagcgtgttc ctgttgcatc aggagggctc atgagcctgg
     9901 ccctgctctg tcccggacaa ggcgcacagc atccggcgat gttcgatcgc gtgcgcggcc
     9961 ttgccgccgc acagccgctg ctcgatgcca tcggcgaact gctgggccgc gatgtgttcg
    10021 ccgctgcggc ggccgacgac cgtttcgaca atgtgcaggc gcagcccctg ctgtgcgcag
    10081 ccagcctggc gcactggcag ggcctgcgcg aggtgttgcc gacgccgacg gtgatcgccg
    10141 gctacagcat cggcgagctc gccgcgcacg ccatcgccgg cagcttcgac accaccacct
    10201 gcctggcact gtctgcgcag cgcgcgcgcc tgatggacgc cgccagcccc cgcgatgccg
    10261 ggctgcaggc agtgctgggg ctggaccgcg atgccacgca gcggttgtgc gacacgcatg
    10321 gcgccttcat cgccatcgcc aatggccatg accacttcat cgtgggcggt gcacagccgt
    10381 cgctgcacgc gttggcggca gacgcgcagg cctgcggcgc ggaaatccgt ccattgccgg
    10441 tccatgtgcc cgcacacacg ccgctgttgg ccggtgcgga agcaccgttt gccgcagcgc
    10501 tgcgggccgc gcaggtgcat gcgccgcggc tgcccctgct ggccggcgtc gatgcccgcc
    10561 cggtgcgtga tggcgccgcc gtggtgcaca cgctgtcggc gcagctggca cagaccatcg
    10621 agtgggcgca ggtgatgcgc caggccttcg agcgcggcgc acgggtgttc ctgcagctgg
    10681 gcccgggcag cgcgctggcg cgcatggtcg cgccgtccta tccgtgctgc gaagtgcgcg
    10741 cggtggaaga gttccagagc cttgagggtg ccgcggcgtg ggtccgcagt gcgctggagc
    10801 ggctgcagta acgggttcga gcagtacgta tcacgcaaca cgccgtacgt cgccttaccc
    10861 cgggatggcg ggtctccatc cgcgctgtac gtgagtcacg tgtctgggag ggcgcatgag
    10921 tccacaaatc gcaacgatca tcggcctggt gatcatgttc atcgtcgcca cggcaatgcc
    10981 gatcaacatg ggcgccgtcg ctttcgcgct ggccttcatc atcggcgggc tatgggtcga
    11041 catgggaggc aaggaagtcc tggccggctt tccaggcgat ctgttcctga ccctggtcgg
    11101 catcacctat ctgttcgcca tcgcgcagaa gaacggcacc atcgacctgc tggtgcactg
    11161 ggcagtgaaa gcggtgcgcg gccatatcgt ggccattccg tgggtgatgt tcgtgatcac
    11221 cgcggtgctc accgcgttcg gtgcgctggg cccggccgcg gtcgccatca tcggcccggt
    11281 cgccctgcgc tttgccaagc agtacaacat caatccgctg atgatgggcc tgctggtcat
    11341 tcatggtgcg caggcgggcg gcttctcgcc gatcagcgtg tacggcagca tcaccaatgg
    11401 cgtggtgcag aaagccgggc tggaagtaac cgagatggcg gtgttcctga ccagcctggg
    11461 cttcaacctg atgatggcga cgatctgctt cttcgccttc ggtggcatcg ccctgctgcg
    11521 tcgcggctcg atcaccgcag cgggaacgat cggcaatgcc gagctggcga tggccggtgg
    11581 cccgcaggca tcgtcgcgcc agttcgcgat cgaaggccat ggtgcgctgg ttgccgccgg
    11641 ggggggcacc ctgtccaatg atccggtggc actggatgcg gtgaacctga cccgcgagcg
    11701 gctgttcacc ctgatcggcc tgctgggcct gggcgtggcc gcgctgatct acaacctcaa
    11761 cgtcggcctg gtctcgatca ccgtggcggt ggcgttggcg ctgctgtcgc cgcagagcca
    11821 gaaaggggcg gtcgatggca tcagctggtc caccgtgctg ctgatctgcg gcgtggtgac
    11881 ctatatcggc gtactggaac atgccggtgc ggtggacttc atcggcaatg gtgtatccga
    11941 tatcggcatc ccgctgctcg gtgcactgct ggtctgctac gtcggtggca tcgtctccgc
    12001 attcgcctcg tcggccgccg tgctgggcgc caccatcccg ctggcggtgc cgttcctgat
    12061 gcagggccac ctcagcgcgg ccggcgtgat ctgtgcgctg gcggtgtcat ccaccatcgt
    12121 cgatgtcagc ccgttctcga ccaatggcgc actggtggtg gcgtcggccg ccaaggaaga
    12181 acgcgagacc ctgttccgcc gcttcctggt ctacagcggc ctggtggtgg cattggggcc
    12241 gctgcttgcc tggctggtat tcgtggtgcc gggctggatg t
//
LOCUS       DAOKIP010000119        12245 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.119,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000119 DAOKIP010000000
VERSION     DAOKIP010000119.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 12245)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12245)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12245
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.119"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            4..858
                     /locus_tag="QEL58_002651"
     CDS             4..858
                     /locus_tag="QEL58_002651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005413235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheR"
                     /protein_id="HDS1677105.1"
                     /translation="MQSPTPIVTGPREFEFADRDFRRVCDLIYQRVGIALAPAKRDMV
                     YGRLSRRLRTLGMRSFQQYLDHLEQEDGDEWQAFTNALTTNLTSFFREPHHFDKLREE
                     LQQRNGRTPLLLWSCAASTGEEPYSMAITACEAFGTLKPPVRIVATDVDTQVLATAGR
                     GVYNIDRVANLDPDLRRRYFQRGSGPNEGQCRVLPALRDLIEFRPLNLLAPRYDVGGP
                     FDALFCRNVMIYFDKPTQRAILGRLVQHLADDGLLYTGHSENYLHAADLIQPCGRTLY
                     RRAAKAGA"
     gene            855..1451
                     /gene="cheD"
                     /locus_tag="QEL58_002652"
     CDS             855..1451
                     /gene="cheD"
                     /locus_tag="QEL58_002652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003486330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemoreceptor glutamine deamidase CheD"
                     /protein_id="HDS1677106.1"
                     /translation="MNASLRTDDVMRYQDARFKTIAAKLLPTQYLVVDDTTALTTTLG
                     SCVAACLRDPVLKIGGMNHFLLPEGNAGDGAPARYGSYAMELLINDMLKRGAHRKRIE
                     AKVFGGANVLKGFTSNPVGTRNAEFVRQYLQAEHIPIIAEDLCGIHPRKIWFFADTGR
                     VVVQRLPHAHEAEVAATESAVRARLSKAPVTGGVELFE"
     gene            1448..2521
                     /locus_tag="QEL58_002653"
     CDS             1448..2521
                     /locus_tag="QEL58_002653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis response regulator protein-glutamate
                     methylesterase"
                     /protein_id="HDS1677107.1"
                     /translation="MTLTGNAPCRVLIVDDSAVVRQMLTEILSSDPAIDVVGTAADPL
                     LAREKIKRLAPDVITLDVEMPRMDGLAFLENLMRLHPLPVVMISSLTERGADTTLQAL
                     SLGAVDFVSKPKLDVARGLQGYADEIIAKVKMAARSRVRPLVRAATPKLTLDAAPAMR
                     PAAPQFRTTDRLIAIGSSAGGTEALRVVLEGLPADAPAVVMTQHLPASFSTAFAERLD
                     RHSAMAVREASDGEAVLPGHAYLPPGGKHLRIIRDGARWRCRVDDGPAVNRHKPAVDV
                     LFRSVAQSAGGNAIGAILTGMGDDGARGLLEMRQAGAPTLVQDEASSVVWGMPGAAFK
                     LGAAEEQVPLERIAERLLALARG"
     gene            2605..4590
                     /locus_tag="QEL58_002654"
     CDS             2605..4590
                     /locus_tag="QEL58_002654"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677108.1"
                     /translation="MALRLNCLPAAIALGLMLSPPASAEDPAAVPVHDAALATDADRT
                     QAVDGAAAAPSPDDWSTRIQVVQGAPASLPGHRDVDLKLRLVSRGDTGKVVTLKLVQL
                     AAAAKAGGGRVDGFSKKNLRGTVIESVSSPAVDEIPTLLRRHLAEYFIAHPDALPEHA
                     QIVSANAGLWSLTYQSLSGNAVPYDLQHEATLTIAQSSPSSPPWLSITCSDPVQTAPL
                     EDWQADDYAQVRTAARQFAQRCVDRLVEQLPTVFPSPSVQLAAAISAASLDPVPTQDE
                     AATATDAGHPAPVLSTDWMKAVHIDHGTGTDAKGKRSGDADLRLVTRSDMGVATLAKM
                     NIFALAVVGARKARGFSKDTLRGDTVEGVSSPAVERVPALLQQRLSEYFNAYPDAVPG
                     APVTVRADPHEWALVYGQLSGSQIPYELKHRTTIEVLPASGASTMTVDCTDGTQSAAL
                     PQWQADDYAEVRSVADELAEQCVARFVARLPEAFPSAMRAAAPASAVAAALPAGNRSR
                     IRIFGANGRSITMHIGGQCRGDARRKVVVARSNSAAVGSLVGGSPQNISIGMPETDTV
                     RAMKSVLFSNPNFQEYSVEAGKPLIFDAQFQNVAHLRCGAAPDSLSIQFVPKAGQDYE
                     VMMRLENEMCVLESKQVAADGSLRVNLVHAPKACAAQ"
     gene            complement(4661..5086)
                     /locus_tag="QEL58_002655"
     CDS             complement(4661..5086)
                     /locus_tag="QEL58_002655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HDS1677109.1"
                     /translation="MLQDRLNSGRTRGWHWAGTAVVLATLVMGHAAMAQQAVQQTAVE
                     RARPAHVPASIVMETKHSNPPRYPSQAFRDEKEGEAILMVQVAADGQWLDAIVLQSSG
                     WPELDEAAQAATRKWRYLPASEDGVPVPGEIRVPVSFKL"
     gene            complement(5204..7795)
                     /gene="acnB"
                     /locus_tag="QEL58_002656"
     CDS             complement(5204..7795)
                     /gene="acnB"
                     /locus_tag="QEL58_002656"
                     /EC_number="4.2.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017908727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional aconitate hydratase
                     2/2-methylisocitrate dehydratase"
                     /protein_id="HDS1677110.1"
                     /translation="MLEAYRHHVAERAALGIPPLPLSAQQTADVIELLKNPPQGEAEF
                     LLDLLTHRVPAGVDDAAKVKASYLAAIALGSEQNPLISRERATELLGTMLGGYNVAPL
                     VQLLDDASVGTIAANGLKKTLLVFDAFHDVQEKAKAGNANAQAVLQSWADAEWFTGNP
                     EVPQSLTVTVFKVPGETNTDDLSPAPDATTRPDIPMHALAMLKNKRDDAPFTPEEDGK
                     RGPIQQILDLKDKGHLVAYVGDVVGTGSSRKSATNSVLWWTGDDIPFIPNKRAGGVCL
                     GSKIAPIFYNTMEDAGALPIELDVSKMEHGDVVELRPYEGKALKNGEVIAEFQVKSEV
                     LFDEVRAGGRIPLIIGRGLTGKAREALGLAPTDLFRLPVQPADNGKGFSLAQKMVGRA
                     CGLAEGQGMRPGTYCEPKMTSVGSQDTTGPMTRDELKDLACLGFSADLVMQSFCHTAA
                     YPKPVDVKTHHTLPEFISTRGGVSLRPGDGVIHSWLNRMLLPDTVGTGGDSHTRFPVG
                     ISFPAGSGLVAFAAATGVMPLDMPESVLVRFKGKMQPGVTLRDLVNAIPLYAIKSGLL
                     TVAKAGKKNIFSGRILEIEGLPELKVEQAFELSDASAERSAAGCSVRLNKEPIIEYLT
                     SNITLLKWMIAEGYQDPRSLQRRIEKMEAWLANPELLEPDADAEYAAVIEIDLADIHE
                     PIVACPNDPDDVKTLSEVAGAKIDEVFIGSCMTNIGHFRAAAKLLEGKRDLPTRLWVA
                     PPTKMDASELTKEGVYGTFGATGARMEMPGCSLCMGNQAQIREGSTAMSTSTRNFPNR
                     LGRNTNVYLGSAELAAICSRLGRIPTKEEYMADVGVIAASGAEIYRYMNFDQIEEYQD
                     VAKTVAA"
     gene            complement(7839..8237)
                     /locus_tag="QEL58_002657"
     CDS             complement(7839..8237)
                     /locus_tag="QEL58_002657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008267153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system VapC family
                     toxin"
                     /protein_id="HDS1677111.1"
                     /translation="MIAVDSPVLVELLSNGPQADAVEAILRQSLVGGRVVVCGATLAE
                     VCASLRGGAEVLEALEEMGVHFNPMEAKSALRAGEMHRRHRQRSGSRRSLDEFMVGAH
                     ALLQCDGLITWNDTFYRDYFKGLKLIVPQA"
     gene            complement(8244..8468)
                     /locus_tag="QEL58_002658"
     CDS             complement(8244..8468)
                     /locus_tag="QEL58_002658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AbrB/MazE/SpoVT family DNA-binding
                     domain-containing protein"
                     /protein_id="HDS1677112.1"
                     /translation="MEATVAERGQITLPKAVRDALGLTKGTLLKVELDGSRIILRKSV
                     DDAISRARGKFALDGFESSDAAVRSVRDED"
     gene            8771..11524
                     /gene="acnA"
                     /locus_tag="QEL58_002659"
     CDS             8771..11524
                     /gene="acnA"
                     /locus_tag="QEL58_002659"
                     /EC_number="4.2.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017159833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aconitate hydratase AcnA"
                     /protein_id="HDS1677113.1"
                     /translation="MSDSFSTRSQLNVGGKTYDYFSLPTLGQRFDISHLPYSMKILLE
                     NLLRHEDGGATVGPDHIEAVARWNPSAEPDTEIAFMPARVVLQDFTGVPCVVDLAAMR
                     DAVVKLGGSPQQINPQIPSELVIDHSVQVDVFGKPDALDLNGKIEFQRNQERYGFLRW
                     GQKAFDNFKVVPPNTGIVHQVNLENLARVVMTADKDGTAIAYPDTVFGTDSHTTMING
                     IGVLGWGVGGIEAEAAMLGQPSSMLIPQVVGFKLTGKLPEGATATDLVLTVTQMLRKL
                     GVVGKFVEFYGDGLQHLPLADRATIGNMAPEYGATCGIFPIDAESLNYLRLSGRSEEQ
                     INLVEAYAKAQGLWHEPGSPHAQYSTTLELDMGTVKPSLAGPKRPQDRVLLEDVQKNY
                     REALVGMTANRDKRSEDVSSFVNEGGGAAVGNEQLAKGFADIEIENRKVRLKDGAVVI
                     AAITSCTNTSNPAVMIGAGLLARNAAAKGLNRQPWVKTSLGPGSRVVTDYLEKAGVLK
                     ELEKIGFYVVGYGCTTCIGNSGPLPTEVSAGIAAGDLVVTSVLSGNRNFEGRVHPEVK
                     MNYLASPPLVVAYAIAGTTDIDLTTQPLGTGSDGQPVFLRDIWPSNKEIGDVIAATIG
                     PEMFKQNYADVFKGDTRWNTIASPDGNLYEWSDASTYIKNPPYFDGMTMQTGSIDDVH
                     GARVMGLFGDSITTDHISPAGNIKKDSPAGRFLQERGVQPADFNSYGSRRGNDDVMVR
                     GTFANIRIKNLMFGGEEGGNTLYYPAGGGQPEKLAIYDAAMKYKADKVPLVVLAGKEY
                     GTGSSRDWAAKGTLLLGVKAVIAESFERIHRSNLVGMGVLPLQFRNGENAQSLGLDGS
                     EVIDITGLQDGASKRATVTATKADGTKKTFEVSVMLLTPKEVEYFRHGGLLQYVLRQL
                     ASK"
     gene            complement(11652..12095)
                     /locus_tag="QEL58_002660"
     CDS             complement(11652..12095)
                     /locus_tag="QEL58_002660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677114.1"
                     /translation="MVRILSCALMVSLSMSAHAVPGAMVQLNFPVIALGETAELNLQL
                     APHPGGLVTYSIHTNVHASEESSGYRVLDVRCPPGFLSNVYQGNAGAVCYRIEDTPHP
                     AGEMSVTVFNEDAPDGHLEWEEGLWSLDTTGPAVKTSWHLFGVRP"
BASE COUNT         2117 a         4270 c         3875 g         1983 t
ORIGIN      
        1 cccgtgcaaa gtcctactcc catcgtcacc ggcccccgcg aattcgagtt cgccgaccgt
       61 gatttccgcc gtgtctgcga cctgatctac cagcgcgtgg gcattgccct cgcgccggca
      121 aagcgcgaca tggtctatgg ccgcctgtcg cgccgcctgc gcacgctcgg catgcgcagc
      181 ttccagcagt acctggatca tctggaacag gaggatggcg atgagtggca ggcgttcacc
      241 aatgcgctga ccaccaacct gacctcgttc ttccgcgagc cgcaccactt cgacaagctg
      301 cgcgaggagt tgcagcagcg caacggccgc acgccgctgt tgctgtggtc gtgcgccgcg
      361 tccaccggcg aagagcccta ctcgatggcg atcaccgcct gcgaagcatt cggcacgctg
      421 aagccgccgg tacgcatcgt cgccaccgac gtcgacaccc aggtactggc cactgcaggc
      481 cgcggcgtct acaacatcga ccgtgtcgcc aacctcgatc cggacctgcg ccgccgctac
      541 ttccagcgcg gcagcggccc caacgagggc cagtgccgcg tgctgccggc gctgcgcgac
      601 ctgatcgagt tccgcccgct gaacctgctg gccccgcgct acgacgtcgg cggcccgttc
      661 gacgccctgt tctgccgcaa cgtgatgatc tacttcgaca agcccaccca gcgcgccatc
      721 ctcggccgcc tggtgcagca cctggccgac gacggcctgc tgtacaccgg ccactcggag
      781 aactacctgc acgcggccga cctcatccag ccctgcgggc gcaccctgta ccgccgtgcg
      841 gcaaaggccg gcgcatgaat gcctcgctgc gtaccgacga tgtgatgcgc taccaggacg
      901 cacgcttcaa gaccatcgcc gccaagctgc tgcccaccca gtacctggtg gtcgatgaca
      961 ccaccgcgct gaccaccacg ctcggctcct gcgtggccgc ctgcctgcgc gacccggtgc
     1021 tgaagatcgg cggcatgaac cacttcctgc tgcccgaagg caacgccggt gatggcgccc
     1081 ccgcgcgcta cggcagctac gcgatggaac tgctgatcaa cgacatgctc aagcgcggtg
     1141 cgcaccgcaa gcgcatcgaa gccaaggtgt tcggcggcgc caacgtgctc aagggcttca
     1201 ccagcaaccc ggtcggcacc cgcaacgccg agttcgtgcg ccagtacctg caggccgagc
     1261 acatcccgat catcgccgag gacctgtgcg gcatccatcc gcgcaagatc tggttcttcg
     1321 ccgataccgg ccgcgtggtg gtgcagcgcc tgccgcacgc ccatgaagcc gaagtggccg
     1381 cgaccgaatc ggccgtgcgt gcacgcctgt ccaaggcccc ggtcaccggt ggcgtggagc
     1441 tgttcgaatg acgctgaccg gcaacgcccc ctgccgggtc ctgatcgtcg acgactctgc
     1501 cgtcgtgcgg cagatgctca ccgagatcct gtccagcgat ccggccattg acgtggtcgg
     1561 caccgccgcc gacccgctgc tggcgcgcga gaagatcaag cgcctggccc cggacgtgat
     1621 cacgctggac gtggaaatgc cgcgcatgga cgggctggcg ttcctggaaa acctgatgcg
     1681 cctgcatcca ctgccggtgg tgatgatctc ctcgctgacc gagcgcggcg ccgacaccac
     1741 tctgcaggca ttgtcactgg gcgccgtcga tttcgtctcc aagcccaagc tcgatgtggc
     1801 ccgtgggctg cagggctatg ccgacgagat catcgccaag gtgaagatgg cggcacgctc
     1861 gcgggtgcgc ccgctggtgc gcgctgccac gccaaagctc acgctcgacg ccgccccggc
     1921 gatgcgcccg gccgcgccgc agttccgtac caccgaccgc ctgatcgcga tcggctcatc
     1981 cgccggtggc accgaagccc tgcgcgtggt gctggaaggc ctgcccgccg acgcgccggc
     2041 cgtggtgatg acccagcacc tgccggccag tttcagcacg gccttcgccg agcgcctgga
     2101 ccggcactcg gcgatggccg tgcgcgaagc cagcgacggc gaagcggtgc tgcccgggca
     2161 tgcctacctg cccccgggcg gcaagcatct gcgcatcatc cgtgacggtg cacgctggcg
     2221 ttgccgggtc gacgacggcc cggcggtgaa ccggcacaag ccggcggtgg acgtgttgtt
     2281 ccgctcggtg gcgcagagcg ccggtggcaa cgccatcggt gccatcctca ccggcatggg
     2341 cgacgatggt gcacgcggcc tgctggaaat gcgccaggcc ggcgcaccga cgctggtgca
     2401 ggacgaggcc agcagcgtgg tctggggcat gcccggcgcc gccttcaagc tgggcgctgc
     2461 cgaagagcag gtgccgctgg agcggattgc cgagcggctg ctggcgctgg cgcgcggctg
     2521 agcccacgcg caccacacct ttcccgaacg gccggccaag gggacccggc cgttcttcat
     2581 cgcgtttccc caaggagctc cactgtggca ctacgcctga actgcctgcc tgccgccatc
     2641 gcgttgggcc tgatgctgtc tccgccggca tcggcggaag accccgctgc cgtcccggta
     2701 cacgacgctg cccttgccac cgacgcagac cgcacccaag cggtcgacgg cgcggctgct
     2761 gcgccctctc ccgatgactg gagcacccgc atccaggtgg tacagggcgc gcctgccagt
     2821 ctgcctggac accgcgatgt cgatctgaaa ctgcgcctgg tctcgcgcgg cgacaccggc
     2881 aaagtggtca cgctcaagct tgtccagttg gcggccgccg ccaaggccgg cggtggccgt
     2941 gtcgatggct tctcgaagaa gaacctgcgg ggcaccgtca tcgaatcagt gtccagcccg
     3001 gccgtcgacg aaatccccac actgctgcgc cgccatctgg ccgagtactt catcgcacat
     3061 ccggatgcgc ttcccgagca cgcgcagatc gtcagcgcaa acgccggcct gtggtcgctc
     3121 acctaccagt cgctgtcggg caacgcggtt ccgtacgatc tgcagcatga ggccaccctc
     3181 accattgcac agtcgtcccc cagcagcccg ccctggctga gcatcacctg cagcgacccg
     3241 gtgcagacgg cgccgctgga agactggcag gcagatgact acgcgcaggt caggaccgcg
     3301 gcacgccagt tcgcgcagcg ctgcgttgac cggctcgtgg aacagctgcc cacggtgttc
     3361 ccttcgccaa gcgtccagct ggccgctgcg atcagtgccg cctcgctcga tccagtgcca
     3421 acccaggacg aggccgcaac ggccacagac gccggccatc cggcaccggt actgtccacg
     3481 gactggatga aggcggtcca catcgaccat ggcaccggca ccgatgccaa gggcaagcgt
     3541 tccggtgacg cagacctgcg actggtgacc cgatcggaca tgggcgtggc cacgctggcc
     3601 aagatgaaca tcttcgccct ggccgtggtc ggtgcacgca aggcgcgtgg cttctccaag
     3661 gacaccctgc gcggcgacac cgtcgaaggc gtgtccagcc ccgcagtgga gcgggtgccg
     3721 gcactgctgc agcagcgtct ttccgagtac ttcaatgcct atcctgacgc ggttcccggc
     3781 gcccccgtga ccgtgcgggc cgacccgcac gaatgggcgc tggtctacgg gcagctcagt
     3841 ggctcgcaga tcccctacga gctcaagcac cgcaccacga tcgaggtgct gccggcctcg
     3901 ggcgcatcga ccatgaccgt tgactgcacc gatggcacgc agtcggctgc gctgccacag
     3961 tggcaggcgg atgactatgc cgaagtgagg agcgtggccg acgagctggc cgagcagtgc
     4021 gtggcgcgat tcgtcgcgcg gctgccagag gcgtttccgt ccgcgatgcg cgccgccgcg
     4081 cctgccagcg ccgttgccgc tgccctgccc gccggcaatc gctcccgcat ccgcatcttc
     4141 ggtgccaacg gccgcagcat caccatgcat atcggtggcc aatgccgcgg cgacgcgcga
     4201 aggaaggtcg tggtcgcgcg cagcaacagc gcggccgtag gcagcctggt gggcggcagc
     4261 ccgcagaata tttccatcgg aatgccggaa accgacaccg tgcgtgcgat gaaaagcgtc
     4321 ctgttctcta acccgaactt ccaggagtat tcggtggagg ccggcaagcc gttgatcttc
     4381 gacgcacagt tccagaacgt cgcccacctc cgctgcggag cagcaccgga ctcgctgtcg
     4441 atccagttcg tgccgaaggc gggtcaggac tacgaagtga tgatgcggct cgagaacgag
     4501 atgtgcgtgc tcgagagcaa gcaggtggct gccgatggca gcctgcgcgt caacctcgtg
     4561 cacgccccca aggcgtgtgc cgcgcagtaa agcgtcggca ccgcggcagg accaacgccg
     4621 ttgccaggca gtgccgggca acggcatcgc taccgcgtga tcacagcttg aacgacaccg
     4681 gtacgcggat ctcgccaggc acgggtacgc catcctcgct ggccggcagg tagcgccact
     4741 tgcgtgtcgc cgcctgcgcc gcctcatcca gttccggcca gccgctgctc tgcagcacga
     4801 tcgcatcaag ccactgcccg tcggccgcca cctgcaccat caggatcgct tccccctctt
     4861 tctcatcacg gaatgcctgc gacggatagc gtggtggatt gctgtgcttg gtctccatca
     4921 cgatcgacgc cggcacgtgc gccggccgag cgcgctcgac agcggtttgc tgcaccgcct
     4981 gctgcgccat cgcggcatgc cccatcacca gcgtggccag caccaccgca gtgccagccc
     5041 agtgccaacc gcgcgtgcga ccgctgttca atcgatcctg caacatccgt gtactccaac
     5101 aagcgaggcg gcaagtctaa cgctgcacgc acaaaaaacc cccggctttc accgggggtt
     5161 cctcgtttca acggggtgcc ggccagtgcc cggcactacc gcatcaggca gcgaccgtct
     5221 tggccacgtc ctggtattcc tcgatctggt cgaagttcat gtagcggtag atctccgcgc
     5281 cgctggcggc gatcacgccc acatcggcca tgtactcttc cttggtcggg atgcggccca
     5341 gacgcgagca gatcgcggcc agttcggccg aacccaggta cacgttggtg ttgcggccca
     5401 ggcggttcgg gaagttgcgg gtcgaggtcg acatcgcggt ggaaccttca cggatctgcg
     5461 cctggttacc catgcacagc gagcagcccg gcatttccat gcgtgcgccg gtggcgccga
     5521 aggtgccgta cacgccttcc ttggtcagct cggaggcatc catcttggtc ggcggggcca
     5581 cccacaggcg ggtcggcagg tcacgcttgc cttccagcag cttggcagcc gcacggaagt
     5641 gaccgatgtt ggtcatgcac gaaccgatga acacttcgtc gatcttggca ccggcgactt
     5701 cggacagggt cttcacgtcg tccgggtcgt tcgggcaggc cacgatcggc tcgtggatgt
     5761 cggccaggtc gatctcgatg acggcggcgt actcggcgtc ggcatccggc tccagcagct
     5821 ccggattggc cagccacgct tccatcttct cgatgcggcg ctgcagcgaa cgcggatcct
     5881 ggtaaccctc ggcaatcatc cacttcagca gggtgatgtt gctggtcagg tactcgatga
     5941 tcggttcctt gttcaggcgc accgagcaac cggcggccga acgttcggcc gaagcgtcgg
     6001 acagctcgaa cgcctgttcg accttcagct ccggcaggcc ttcgatttcc aggatgcgac
     6061 cggagaagat gttcttcttg ccggccttgg ccacggtcag caggcccgac ttgatcgcat
     6121 acagcgggat cgcgttgacc aggtcacgca gggtcacgcc cggctgcatc ttgcccttga
     6181 agcgcaccag caccgattcc ggcatgtcca gcggcatcac gccggtggcc gcggcgaagg
     6241 cgaccaggcc cgaaccggcc gggaacgaaa tgcccaccgg gaaacgggtg tgcgagtcac
     6301 caccggtgcc gacggtgtcc ggcagcagca tgcggttgag ccagctgtgg atcacgccgt
     6361 cgcccgggcg cagcgagacg ccgccacggg tggagatgaa ctccggcagg gtgtggtggg
     6421 tcttcacgtc caccggcttc gggtacgcag cggtgtggca gaacgactgc atcaccaggt
     6481 cggccgagaa gcccaggcag gccaggtcct tcagctcgtc acgggtcatc gggccagtgg
     6541 tgtcctgcga gccgaccgag gtcatcttcg gttcgcagta ggtgcccggg cgcatgccct
     6601 ggccttctgc caggccacag gcgcggccga ccatcttctg cgccagcgag aagcccttgc
     6661 cgttgtcggc cggctgcacc ggcaggcgga acaggtcggt cggggccagg cccagcgctt
     6721 cgcgcgcctt gccggtcagg ccgcggccga tgatcagcgg gatgcggcca ccggcacgca
     6781 cttcgtcgaa tagcacttcg ctcttgacct ggaattcggc gatcacttca ccgttcttca
     6841 gcgccttgcc ttcgtacgga cgcagctcga ccacgtcgcc gtgctccatc ttcgacacgt
     6901 ccagctcgat cggcagcgca ccggcatctt ccatggtgtt gtagaagatc ggggcgatct
     6961 tcgaacccag gcagacgcca ccggcacgct tgttcgggat gaacggaatg tcatcgccgg
     7021 tccaccacag cacgctgttg gtggccgact tgcgcgagga accggtaccg accacgtcgc
     7081 ccacgtaggc caccaggtgg cccttgtcct tcaggtcgag gatctgctgg atcgggccgc
     7141 gcttgccgtc ttcttccggg gtgaacggcg cgtcatcgcg cttgttcttc agcatcgcca
     7201 gcgcgtgcat cggaatgtcc gggcgggtgg tcgcgtccgg cgccggcgac aggtcgtcgg
     7261 tgttggtctc gcccggcacc ttgaacacgg tgacggtcag gctctgcggc acttccgggt
     7321 tgccggtgaa ccactcggca tcggcccagc tctgcagcac ggcctgggcg ttggcgttgc
     7381 ccgccttggc cttttcctgc acgtcatgga acgcatcgaa caccagcagg gtcttcttca
     7441 ggccgttggc ggcgatggtg ccgacgctgg cgtcgtccag cagctgcacc agcggggcaa
     7501 cgttgtaacc gccgagcatg gtgcccagca gttcggtggc gcgctcacgg ctgatcagcg
     7561 gattctgctc gctgcccagc gcgatcgccg ccaggtacga ggctttgact ttggcagcgt
     7621 catcaacgcc ggccggcacg cggtgggtca gcaggtcgag caggaactcg gcctcgccct
     7681 gcggcgggtt cttcagcagt tcgatgacat cggccgtctg ctgcgcgctc agcggcagcg
     7741 gcgggatgcc aagcgcagcg cgctcggcga cgtggtggcg gtaggcttcc aacatgacaa
     7801 ctcccgggta atgcgtaggt tgaaaaaaca aagtgggctc aggcttgcgg cacgatcagc
     7861 ttcaggccct tgaagtagtc gcggtaaaac gtatcgttcc aagtgatcag gccgtcgcac
     7921 tgcagcagtg cgtgggcgcc gaccatgaat tcgtccaggc tgcggcggct gccactgcgc
     7981 tggcggtggc ggcgatgcat ctcgccggcg cgcagcgccg acttggcttc catcgggttg
     8041 aaatgcacgc ccatctcttc cagcgcttcc agcacctcgg caccgccgcg cagcgaggcg
     8101 cagacctcgg ccagggtcgc gccacagacc accacgcggc cgccgaccag gctctgccgc
     8161 aggatggctt ccaccgcatc ggcctgcggg ccattgctga gcagttcgac cagcaccggc
     8221 gaatcgacgg cgatcatcac cggtcagtcc tcgtcgcgga ccgaacgcac ggccgcgtcg
     8281 gacgattcga agccatccag cgcgaacttg ccgcgcgccc gtgaaatggc atcgtcaaca
     8341 ctcttgcgca ggatgatgcg gctgccgtcc agctcgacct tcagcagcgt gcccttggtc
     8401 aggccgaggg catcacgcac cgccttgggc agggtgatct gtccgcgttc tgcaacagtg
     8461 gcttccatcg gtaggccctc cagagtatgc acaaattata catacttccc cgggcatact
     8521 tccaccctga cccggaccgg caccccgcca gcccttgcct cgcaaaggat cggccacaaa
     8581 cgtgacatac gccatacacc ttcccctgta gtctggaacc gatgccgcag gcccggcccc
     8641 ggtccgggtg aatccattca gtttcgggtt catactggaa ccaccggggc caccaggccc
     8701 gcggcgaccg caagcaggcc cgcccatgcg cgagccactg caagccatcc gcaagaagga
     8761 gttaccccgc atgagcgatt cgttctccac ccgcagccag ctgaacgtcg gcggcaagac
     8821 ctacgactac ttcagcctgc ccacgctggg ccagcgcttc gatatctccc acctgcccta
     8881 ctcgatgaag atcctgctgg agaacctgct ccggcatgag gacggcggcg ccaccgtcgg
     8941 cccggaccac atcgaagccg tggcccgctg gaatccgtcc gccgagccgg acaccgaaat
     9001 cgccttcatg ccggcgcgtg tggtcctgca ggacttcacc ggcgtgccct gcgtggtcga
     9061 cctggccgcg atgcgcgacg ccgtggtcaa gctcggcggc tcgccccagc agatcaaccc
     9121 gcagattccc tccgaactgg tcatcgacca ctcggtgcag gtcgatgtgt tcggcaagcc
     9181 cgatgcgctg gacctcaacg gcaagatcga gttccagcgc aaccaggaac gctacggctt
     9241 cctgcgctgg ggccagaagg ccttcgacaa cttcaaggtg gtgccgccca acaccggcat
     9301 cgtccaccag gtgaacctgg aaaacctggc ccgcgtggtg atgaccgccg acaaggacgg
     9361 cacggccatc gcttatccgg acaccgtgtt cggcaccgac agccacacca cgatgatcaa
     9421 tggcatcggc gtgctcggct ggggcgtggg cggcatcgaa gcggaggcgg ccatgctcgg
     9481 ccagccgtcg tcgatgctga tcccgcaggt ggtgggcttc aagttgaccg gcaagctgcc
     9541 cgagggcgcc accgccaccg acctggtgct gaccgtcacc cagatgctgc gcaagctggg
     9601 cgtggtcggc aagttcgtcg agttctacgg tgacggcctg cagcacctgc cgctggccga
     9661 ccgcgccacc atcggcaaca tggccccgga atacggcgcc acctgcggca ttttcccgat
     9721 cgacgccgaa tcactgaact acctgcgcct gtccggccgc agcgaagagc agatcaacct
     9781 ggtcgaggcc tacgccaagg cgcagggcct gtggcacgaa cccggcagcc cgcacgccca
     9841 gtacagcacc accctggaac tggacatggg cacggtgaag ccgtcgctgg ccggcccgaa
     9901 gcggccgcag gaccgcgtgc tgctggaaga cgtgcagaag aactaccgcg aagcgctggt
     9961 gggcatgacc gccaaccgcg acaagcgcag cgaggatgtg tcctcgttcg tcaatgaagg
    10021 cggcggtgcg gcggtcggca acgagcagct ggccaagggc ttcgccgaca tcgagatcga
    10081 gaaccgcaag gtacggctga aggatggcgc ggtggtcatc gccgcgatca cctcgtgcac
    10141 caacacctcc aacccggcgg tgatgatcgg tgccggcctg ctggcccgca acgcagcggc
    10201 caagggcctg aaccgccagc cgtgggtgaa gacctcgctc ggcccaggct cgcgcgtggt
    10261 caccgactac ctggaaaagg ccggcgtgct gaaggagctg gagaagatcg gcttctacgt
    10321 ggtcggctac ggctgcacca cctgcatcgg caactccggc ccgctgccga ccgaagtcag
    10381 cgccggcatc gccgccggcg atctggtggt cacctcggtg ctgtcgggca accgcaactt
    10441 cgagggccgc gtgcatcccg aagtgaagat gaactacctg gccagcccgc cgctggtggt
    10501 ggcctacgcc atcgccggca ccaccgacat cgacctgacc acccagccgc tgggtaccgg
    10561 cagcgatggc cagccggtgt tcctgcgcga catctggccg agcaacaagg aaatcggcga
    10621 cgtcatcgcc gccaccatcg gcccagagat gttcaagcag aactacgccg atgtgttcaa
    10681 gggtgacacc cgctggaaca ccatcgcctc gccggacggc aacctgtacg agtggagcga
    10741 tgcctccacc tacatcaaga acccgccgta cttcgatggc atgaccatgc agaccggcag
    10801 catcgacgac gtgcacggtg cacgcgtgat gggcctgttc ggcgactcga tcaccaccga
    10861 ccacatctcc ccggccggca acatcaagaa ggactcgccg gcaggccgct tcctgcagga
    10921 acgcggcgtg cagccggccg acttcaacag ctacggcagc cgccgcggca acgatgacgt
    10981 gatggtccgt ggcaccttcg ccaacatccg catcaagaac ctgatgttcg gtggcgagga
    11041 aggcggcaac accctgtact acccggccgg cggtggccag ccggagaagc tggcgatcta
    11101 cgatgcggcc atgaagtaca aggctgacaa ggtgccgctg gtggtgctgg ccggcaagga
    11161 atacggcacc ggctcgtcgc gtgactgggc ggccaagggc accctgctgc tgggggtgaa
    11221 agcggtcatc gccgagagct tcgagcgcat ccaccgctcc aacctggtcg gcatgggcgt
    11281 gctgccgctg cagttccgca acggcgagaa cgcgcagagc ctgggcctgg acggctcgga
    11341 agtgatcgac atcaccggcc tgcaggatgg cgccagcaag cgcgccacgg tcactgccac
    11401 caaggctgat ggcacgaaga agaccttcga agtctcggtg atgctgctga ccccgaagga
    11461 ggtcgaatac ttccgtcatg gcggcctgct gcagtacgtg ctgcgccagc tggccagcaa
    11521 gtgacgcttc gctcccggta gcgtcgactg ctggtcgact acccgaaaaa aggggccgga
    11581 tcctcacgga tccggccttt ttcgtctgca caccgtgccg ccggcatcag gtcacgcgtc
    11641 gaccctccag atcatggccg cacgccaaac aggtgccacg acgttttcac tgcggggccc
    11701 gtggtgtcca gcgaccacag gccttcctcc cactcaagat gcccatccgg cgcatcctcg
    11761 ttgaacactg tcaccgacat ctcaccggcc ggatgcggcg tatcctcgat gcgatagcac
    11821 accgcaccgg cgtttccctg gtagacgttg gagaggaagc ccggcgggca gcgcacatcc
    11881 agcacccggt agccgctgct ctcctcgctg gcatggacat tggtgtggat cgaataggtc
    11941 accagcccac ccggatgtgg tgccaactgc aggttcagtt ctgccgtttc acccagcgcg
    12001 atcaccggga aattcaattg caccatcgcg cccggcaccg catgcgcact catcgaaagc
    12061 gagaccatca acgcacagct caggattcgg accattgctc aactccggaa atggatcgtt
    12121 gaacgatgat caccgcgaac ggccctgcct gtctttcaga gtgctacgaa attccgtgcg
    12181 gccgggtgcc tccagctgtc cagcagcgag cgcttcaccc tgggtggcgt cgactgctgg
    12241 tcggc
//
LOCUS       DAOKIP010000120        12228 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.120,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000120 DAOKIP010000000
VERSION     DAOKIP010000120.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 12228)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12228)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12228
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.120"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(70..1197)
                     /gene="nagA"
                     /locus_tag="QEL58_002661"
     CDS             complement(70..1197)
                     /gene="nagA"
                     /locus_tag="QEL58_002661"
                     /EC_number="3.5.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012481526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylglucosamine-6-phosphate deacetylase"
                     /protein_id="HDS1677115.1"
                     /translation="MTDIRSLQGRILTPLGWRRGHVHFDSHVRQLQVDDHSGADDLQL
                     PVILPGFIDLHVHGAAGVDLMQGGDVARTIARTHLRFGTTTLLATTMTAGLDEIEQAL
                     QGVAAAMAAPDAEAASIVGVHLEGPFISPQRLGAQPNRTIEATLALVQQLHALAPIRV
                     MTLAPEIGEHTALIPALAAMGIRVQLGHSAGTYEEGVAALQAGASGFTHLFNGMTGVD
                     HYRPGIAAAALAHAQYAEIIPDLQHIHPGVIRLAARAIPRLYAVTDATAATGMPDGEY
                     ALGEQRVHKCGGCVRLATGSLAGSALTMDQALRNLVRVGLDLADASQRVSTFPADYLG
                     LGDRGRIAPDARADLVVLDAELRLQQVVVGGHVVDLNAANA"
     gene            complement(1194..1970)
                     /locus_tag="QEL58_002662"
     CDS             complement(1194..1970)
                     /locus_tag="QEL58_002662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005411502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR family transcriptional regulator"
                     /protein_id="HDS1677116.1"
                     /translation="MRNTRSRRQQILQLLIEHGSVQVADLVERFGVSAVTIRADLTHF
                     ESQGLANRTHGGATLVRTPPQEQDIHEKDALNLPLKESIGACAARLVRPGDNIIIDSG
                     STTMTLARHLRTQRDVTVMTNGLNIAWELANAPGINVLLTGGLLRQQSLSLQGSQAEA
                     SLNSYSFDTLFLGVDGLDLQFGLTTHDEAEARLNHRMVERARRIVVLTDASKFGRVSL
                     HRIARLDQIHTIITDAGIDDATREGLQRLGIEVIIAEPTT"
     gene            complement(2005..3339)
                     /locus_tag="QEL58_002663"
     CDS             complement(2005..3339)
                     /locus_tag="QEL58_002663"
                     /EC_number="4.1.2.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-tagatose-bisphosphate aldolase, class II,
                     non-catalytic subunit"
                     /protein_id="HDS1677117.1"
                     /translation="MSPLQTLLASHRAGANVGLYSVCCSNEQVLRAAMHVALAHGTVL
                     LIEATSNQVDQFGGYTGMTPPQYRDYVGTLADEEGFPRERLILGGDHLGPNAWQKRPA
                     AEAMTHARVLIEAYVAAGFHKIHLDCSMSCADDPVPLPDAIVAARSAELAGIAERTAA
                     EHGLPPPVYVIGTEVPIPGGEASLAEGLQVTTPAAAAQTLAIHQQAFDTPQLRDAWQR
                     VIAMVVQPGVDFDHSSVHEYDAAAAGTLADFLEQQPRIVFEAHSTDYQRESGLHALVR
                     DHFAILKVGPAATFAYREALFALAAIEAELLPAAQCSRLPQVLDEVMVAQPKYWQSYY
                     QGDDAALRLLRSYSFSDRCRYYWGEPALVQAVQTLFANLERHAPPLVLLSQYLPEQYR
                     AVREGALANTPTALVQHRIGLCLGEYARACSANQAGPRKQNESSAASVLANG"
     gene            complement(3356..4294)
                     /locus_tag="QEL58_002664"
     CDS             complement(3356..4294)
                     /locus_tag="QEL58_002664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005411500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family protein"
                     /protein_id="HDS1677118.1"
                     /translation="MAELIAHAAYGIDIGGTKIELVACDAAMQVTWRRRVSTPQGDYE
                     GFLQAMLGLVADADAALGRNDAAIGIALPGVRDRRTGRQLSANVPALTGHSVAADLQA
                     RLQRPLHFGNDLQCFALSEAHGGAADGYPSMFGAILGTGAGGGFCLHGRLLSGFNGLA
                     GEWGHWSVPGHLLQRHGLPLIDCACGLQGCVERYVSGSGLAMIERHLGGSAADASAVI
                     ALAEAGDTRARQALDIHRDLLGHSLAALVLALDPHVIVLGGGLSQYAPLYQQLPAAIS
                     AHLFNGVQVPPIVPPRFGDAGGARGAALLACHPSFS"
     gene            complement(4287..5441)
                     /locus_tag="QEL58_002665"
     CDS             complement(4287..5441)
                     /locus_tag="QEL58_002665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIS domain-containing protein"
                     /protein_id="HDS1677119.1"
                     /translation="MDVTLLSDVSAWQRLGGADTATEIAQQPALWEALAQDLSRARDR
                     LQAFLGDSLNDPHQRVLFTGAGSSGFIAEMVADAINAQWPADVRVVHTTSLLTHPALY
                     LQRDRPTLLVSFGRSGSSPESVAAVDRVRSDVDDARFLDITCNADGELARRGAGRADT
                     CTLLMPSASCDRAFAMTSSLTCMLLAALTVFDRSPWDARIARLKQIAALAREGQAQWD
                     APVAALAQRPFNRIIYLGSGPLEALARECALKVLELTAGRVLALANTPLGFRHGPKST
                     LDGNTLVVVLRSVQPLARRYEQDLLEELRRDGVAGQVLAIGPHSDIGAEDEYTLTVPA
                     LDDPWLAPVWLGFAQLFALQRSAALGLTPDNPFPDGTVNRVVKGVTIHHG"
     gene            5764..9123
                     /locus_tag="QEL58_002666"
     CDS             5764..9123
                     /locus_tag="QEL58_002666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005411498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NPCBM/NEW2 domain-containing protein"
                     /protein_id="HDS1677120.1"
                     /translation="MENCVRRSPLMLALLPALMLASLPARAEPVGNLRSVAASDSRDG
                     VQGWDLQTDKGARIRIELPATDIIRVQAGRNGTLTGAGDKAAPIVLPQPQANVKAQLE
                     EDAQEIRVRTDALVLHVQRQPLRLRLERLDNGQPTALWQELQPLDLDATQSVQVLSSQ
                     ADEGYFGGGQQNGRYQFKGRELEVSYSGGWEEGDRPSPAPMLLSSRGWGMLRNTWSDG
                     SYDLRQPDQATLLHREDRFDAYYFVGADLPKLIERYTQLTGRPNMVARWALSYGDADC
                     YNDGDNAKKPGTVPEGWSDGPTGTTPDVIDSVAKQYRAHDMPGGWILPNDGYGCGYKQ
                     LPETVKGLAGYGFRTGLWTENGVDKIAWEVGKAGSRVQKLDVAWTGKGYQFAMDANRQ
                     AFNGILDNSDSRPFLWTVMGWAGIQRYAVAWTGDQSSSWDYIRWHVPTLVGSGLSGMA
                     YASGDVDAIFGGSAETFTRDLQWKAFTPVLMGMSGWSSNARKHPWWYDEPYRSINRDY
                     LKLKMRLTPYMYGLVHEAAQTGAPPVRGLMWDNPRDPHAQDETYKYQFLLGRDLLVAP
                     VYRSQAASRGWRRDIHLPAGGWIDYWDGRRVQAAADGRQLDRQVDLATLPVFVRAGAI
                     LPMYPSMLFDGEKPLDEVTFDLYPQGDSQYTLYEDDGNTRRYQQGESSTQVIRVQAPA
                     QGSGPVQVQIDAVQGQYNGQLAQRRYGLRVLSRQAPRAVQAGGRALPALADAAAFNTA
                     AEGWYFDAQERRGTLHVRTTAQDIRQPLQLQLDFAVAAAVADDAYPAAPVLGRELPAD
                     SLLVVNRPAEEPGHALENAFDDDPGTWFRSVRNQAVRTGAHEWVIGFGERRMIDGIDI
                     APRNDKNWKHGQVRDYEVYLGDSNGEWGEPIARGRLQLKEGVQRIDFPAHAGRLLRFR
                     VLSVQNPEGDGASSTDPMVTAAQGSARAFDALQPRDVGPIALSTFHILEHQEPERPAR
                     QRYLSELPVPAALASQVRADQSFRGDAGMRMNGLQFRRGLGVAANSRIDLRLQGGWRL
                     LRADLGIDDACRTAGGLQFQVWGDNRLLYDSGLVKAPGVVKPELDIRGLSTLSLRTLG
                     AQGSQPAQVCANWANAVLIGQEGDSASIVAP"
     gene            9246..12221
                     /locus_tag="QEL58_002667"
     CDS             9246..12221
                     /locus_tag="QEL58_002667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDS1677121.1"
                     /translation="MLPARHHRPPCRSIAPLTLAIAGVLLSVAVPAVAQESKDKATDL
                     ARIEVTGSNIRRTDVETASPVQVISKQDIQNMGARTLLQVLDNLPAARPAQQDARSLF
                     TGSDGASQANLRGLGAQGTLVLLNGRRLSYYGAPAGFQTQFVNIDAIPAAAIERMEVL
                     TDGASAVYGTDAVAGVINVITKRNFQGAEVSFTNDTSSRIDSYGERQASITAGFGDLA
                     ENRFNIYGAVNMYRRDAIPLSDFYDKRPDQYYVNNPNYLNNLRLGVGSKPGEFNPGSY
                     FAFDPVTGRRVQEAAPGCKNVLTSEAAGPRCVWETWMNNEIDAGAKSERNTAYLNGTF
                     LVGDSTEIFAEATYTDIDLRANGGTPRTYGTTTGNPTSWFSRNTGNNVNQFLYPFLGP
                     NNEYNHASPEMKAMMGGVVGLQYLLQDAGANYFGQRNTDKSYRVLAGARGNVGDWNWE
                     TAFASAGTHSTTYQTINVNTKGFEKAFGPYTIDPGTGRVIISDHPAYKFGEISEANAA
                     LIREAFPTFDIQSWTRLHTLDGKIEGPLFQLPAGEMRAAFGFNASRETFYTPGNADAA
                     NGLITQQGGSWFDGKRNTYALFAETVAPITDKLELDAAVRVDKYPNFSANIAPKIGFK
                     YQAFDQLMLRGTYSTGFRAPSLAESGNGGVFAQLGGFRDELRCNETNAIANLLLKSQR
                     PGDVDLGKTLLNVDCNRTVARMTQPNKDLKPEKAKIATLGFVYEPASWLSVSADYWFI
                     YRNNEIVAPDYRRMEDIISMSRSPITDSDRANLAQLAAMCADPASGVSCPANLPGYSA
                     GNVASVVGQYKNRGKTLIDGFDIDARSRFSLGDWGNLNIGLAATIANRNRFYMDAENG
                     WYYGDVVGYYNNPRLRATLNADWTYKQVTTSMFVNYVGGTKWATDQVDEVSNNKETCT
                     GGYLALQKSKCDGAPSWWTANMSVTWRPDDAWNLSFTVKNLFNRLPFYDPNSFLGDSS
                     DYATIFGRGYSVTIGYRFK"
BASE COUNT         2092 a         4087 c         4173 g         1876 t
ORIGIN      
        1 cgtcaggcat ttccggcgtc aaggagcggt ggtacgtcag gtgttccagg cgtcaggacg
       61 ggcggcacgt caggcgtttg cagcgttcaa atcaaccacg tgcccgccga ccaccacctg
      121 ctgcaggcgc agttcggcgt ccagcaccac caggtcggcg cgggcgtcgg gcgcgatgcg
      181 gccgcgatcg cccaggccaa ggtagtcggc agggaaggtg gaaacgcgtt gcgaggcgtc
      241 agccaggtcc agcccgaccc gcaccaggtt gcgcaacgcc tggtccatgg tcagcgcgct
      301 gccggccagc gaaccggtcg ccagtcgcac gcagccgccg cacttgtgca cgcgttgctc
      361 gcccagggcg tattcgccat cgggcatgcc ggtggcggca gtggcgtcgg tcactgcgta
      421 caggcgcggg atcgcgcgcg cggccagccg gatcacgccg gggtggatgt gctgcaggtc
      481 gggaatgatc tcggcgtact gcgcatgcgc cagcgccgcc gcggcaatgc ccgggcgata
      541 gtgatcgacg ccggtcatgc cgttgaacag gtgggtgaaa ccggaggcac cggcctgtag
      601 cgcggccacg ccttcctcgt aggtaccggc gctgtggccg agctgcacac ggatgcccat
      661 cgctgcaagc gcgggaatca acgcggtgtg ctcgccgatc tccggcgcca acgtcatcac
      721 ccggatcggg gcgagtgcgt gcagctgctg caccagggcc agcgtcgctt cgatcgtgcg
      781 gttgggctgc gcgcccagcc gttgcgggct gatgaagggg ccctccagat gcacgccgac
      841 aatgctcgcg gcctctgcat ctggtgccgc catcgcagcg gccacgccct gcagcgcctg
      901 ctcgatttcg tccaggccag cggtcatggt ggtcgccagc agcgtggtgg taccaaagcg
      961 cagatgggtg cgggcaatgg tgcgcgccac gtcgccgccc tgcatcaggt ccacgccggc
     1021 cgcaccgtgc acatgcaggt cgatgaagcc gggcaggatc accggcagct gcagatcgtc
     1081 agcgccgctg tggtcgtcca cctgcagctg gcgcacgtgc gaatcgaagt ggacatggcc
     1141 gcgccgccaa cccagtgggg tgaggatgcg gccctgcagg gagcggatgt cggtcatgtg
     1201 gtgggctcgg cgatgatcac ttcgatgccc agccgttgca gtccctcgcg ggtggcgtcg
     1261 tcgatgccgg cgtcggtgat gatggtgtgg atctggtcga ggcgcgcaat gcggtgcagg
     1321 ctgacgcggc cgaacttgga ggcatcggtc agcaccacga tgcggcgcgc gcgctcgacc
     1381 atgcggtggt tgaggcgggc ttcggcttcg tcgtgggtgg tcaggccgaa ctgcaagtcc
     1441 aggccatcca cgcccaggaa cagggtgtcg aagctgtacg agttgaggct ggcttcggcc
     1501 tggctgccct gcagcgacag cgactgctgg cgcagcaggc cgccggtcag cagcacgttg
     1561 atgcccggtg cgttggccag ctcccaggcg atgttcaacc cgttggtcat caccgtcacg
     1621 tcgcgctgtg tgcgcaggtg gcgggccagg gtcatcgtgg tcgaaccgga atcgatgatg
     1681 atgttgtcac cggggcgcac caggcgtgcg gcgcaggcgc caatggactc cttcagcggc
     1741 aggttcagcg catccttctc gtggatgtcc tgttcctgcg gcggcgtgcg caccagggtc
     1801 gcgccgccgt gggtgcggtt ggccagcccc tgcgactcga aatgggtcag gtcggcccgg
     1861 atggtcaccg ccgacacgcc gaagcgctcg accagatcgg ccacctgcac cgagccatgc
     1921 tcgatcagca gctgcaggat ctgttgccgg cgggagcggg tgttgcgcat ggccatctct
     1981 cggtgtcgtc aggaaaggta gagattagcc gttcgcaaga acggaggcag ccgaactttc
     2041 gttctgcttg cgggggccag cctggttggc actgcaggcg cgggcgtact cgcccaggca
     2101 caggccgata cggtgctgca ccagtgcggt gggcgtgttg gccagggcgc cttcgcgcac
     2161 ggcacggtac tgctccggca ggtactggct gagcagcacc agcggcggcg cgtgccgttc
     2221 caggttggcg aacagggtct gcaccgcctg caccagcgcc ggctcgcccc agtagtagcg
     2281 gcagcggtcg ctgaaggaat agctgcgcag caggcgcagt gcggcgtcat cgccctggta
     2341 gtaggactgc cagtacttcg gctgcgcgac catcacctcg tccagcacct gcggcaggcg
     2401 cgagcattgc gcggccggca gcagttccgc ttcgatcgca gccagcgcga acagcgcttc
     2461 gcgataggcg aaggtggcgg ccgggccgac cttgaggatg gcgaagtggt cgcgcaccag
     2521 tgcgtgcagg ccgctttcgc gctggtagtc ggtggagtgc gcttcgaaca cgatgcgcgg
     2581 ctgctgttcg aggaaatcgg ccagcgtgcc agcggcggcg gcatcgtact cgtgcacgct
     2641 gctgtggtcg aagtccacgc ccggctgcac caccatcgcg atcacgcgct gccaggcatc
     2701 gcgcagctgc ggcgtatcga atgcctgctg gtggatggcc agggtctgcg cggcggccgc
     2761 gggcgtggtc acctgcaggc cttcggccag cgaggcttcg cctccgggaa tcggcacttc
     2821 ggtaccgatc acgtagaccg gcggtggcag gccatgctcg gcggcggtgc gctcggcgat
     2881 cccggccagc tcggccgagc gtgcggcgac gatggcatcg ggcagcggca ccgggtcatc
     2941 ggcgcaggac atgctgcagt ccagatggat cttgtggaag ccggcggcga cgtaggcctc
     3001 gatcagtacg cgggcgtggg tcatcgcttc ggcggccggg cgcttctgcc aggcattcgg
     3061 gccgaggtgg tcgccgccca ggatcagccg ctcgcgcggg aagccttcct catcggccag
     3121 ggtgccgacg taatcgcggt actgcggcgg ggtcatgccg gtgtagccgc cgaactggtc
     3181 gacctggttg gaggtggcct cgatcagcag cacggtgccg tgcgccagcg ccacgtgcat
     3241 ggccgcgcgc agcacctgct cgttgctgca gcagacgctg tacaggccga cgttggcacc
     3301 ggcgcggtgg gaggcaagca gggtctgcaa cggggacatg gtcaggctcc ggacatcagg
     3361 aaaacgaggg gtggcaggcg agcagggcag caccacgtgc gccgccggcg tcgccgaagc
     3421 ggggcggcac gatcggcggt acctgcacgc cgttgaacag atgtgccgat atggcggccg
     3481 gcagctgctg gtacagcggc gcgtactgcg agaggccacc gccaagcacg atcacgtgcg
     3541 ggtccagtgc cagcaccagc gcggccaggc tgtggccgag caggtcgcgg tggatgtcca
     3601 aggcctggcg cgcgcgcgta tcgccggcct cggcgagtgc gatcaccgcg ctggcgtcgg
     3661 cggcactgcc gcccagatgg cgttcgatca tcgccagccc actgccggag acgtaacgct
     3721 cgacgcagcc ctgcaggccg caggcgcagt cgatcagcgg caggccgtgt cgctgcagca
     3781 ggtggccggg cacactccag tgcccccatt cgccggccag gccgttgaag ccggacagca
     3841 ggcggccgtg caggcagaaa ccaccacccg cacccgtgcc gaggatggcg ccgaacatgc
     3901 tggggtagcc atcggcggcg ccgccgtgcg cctcggaaag ggcaaagcac tgcaggtcgt
     3961 tgccgaaatg cagggggcgc tgcaaccggg cctgcagatc ggcggcgacg ctgtggccgg
     4021 tcagcgccgg cacgttcgca ctgagctggc gacccgtgcg gcgatcacgc acgccgggca
     4081 gcgcgatgcc gatggcggcg tcgttgcggc ccagtgcagc atccgcatcg gccaccagcc
     4141 ccagcatggc ctgcaggaag ccttcatagt cgccctgcgg cgtgctgacg cgacggcgcc
     4201 aggtgacctg catcgccgca tcgcacgcca ccagctcgat cttggtgccg ccgatgtcga
     4261 tgccgtaggc ggcgtgggca atcagctcag ccatggtgga tggtgacgcc cttgacgacg
     4321 cggttgacgg tgccgtccgg gaacggattg tccggggtca ggcccaacgc ggccgagcgt
     4381 tgcagcgcga acagctgcgc aaagcccagc cacaccggcg ccagccacgg gtcatccagt
     4441 gccggcacgg tgagggtgta ttcgtcttcg gcaccgatat ccgaatgcgg gccgatcgcc
     4501 agcacctgac cggccacgcc gtcgcggcgc agttcttcca gcaggtcctg ctcgtaacgg
     4561 cgcgccagcg gctgcacgct gcgcagcacc accaccagcg tgttgccgtc cagcgtcgac
     4621 ttcgggccgt ggcggaaacc cagtggcgta ttggccagcg ccagcacgcg gccggcggtc
     4681 agctccagca ccttcagcgc gcactcgcgg gccagcgctt ccagcgggcc gctgccgagg
     4741 tagatgatgc ggttgaacgg gcgctgcgcc agcgcggcga ccggcgcatc ccactgcgcc
     4801 tggccttcgc gggccagtgc tgcgatctgc ttcaggcgcg cgatgcgcgc gtcccacggc
     4861 gagcggtcga atacggtcag cgcggccagc agcatgcagg tcaggctgct ggtcatggcg
     4921 aaggcgcggt cgcagctggc cgacggcatc agcagggtgc aggtatcggc acggccggca
     4981 ccgcggcggg ccagctcgcc atcggcgttg caggtgatgt cgaggaagcg tgcgtcatcc
     5041 acgtcgctgc gcacgcggtc cactgccgcc acgctttccg ggctggagcc gctgcggccg
     5101 aacgagacca gcagggtcgg gcggtcgcgc tgcaggtaca gcgccgggtg ggtcagcagg
     5161 ctggtggtat gcaccacgcg cacgtcggcc ggccactgcg cgttgatcgc gtcggccacc
     5221 atctcggcga tgaagccgga gctgccggcg ccggtgaaca gcacgcgctg gtggggatcg
     5281 ttgaggctgt cgccgaggaa ggcctgcagg cgatcgcggg cacgcgacag atcctgcgca
     5341 agggcttccc acagcgcagg ctgctgggcg atttcggtag cggtatcggc tccgccaagg
     5401 cgctgccagg cggacacatc ggaaagcagg gtgacgtcca ttcggaggtt ccagttgggc
     5461 cagcgcacca tctgtgtttt ctttcgaaat gtcaaatacc gaaagtaaaa agaaagaaaa
     5521 tgtgatgccg tgtttgcctt gagctggacg tgcgggaaaa cgaaagaaga ggctgtatgc
     5581 cgtatcgcac aatgcttaac aggcgcctgc aagcgcttac acaaagtatt gcgacgcaac
     5641 aactttcgtt ttaaaggaat atatcttcct ttttcctttc aatttgttga catctttcga
     5701 atcgctgccc tagagtcggc ccaaccgctt tcgaaacgcc cggtgaacgg gttgggagtc
     5761 cgcgtggaaa actgcgttcg tcgctcgccg ctgatgctgg ccctgttgcc ggcgctgatg
     5821 ctggcgtccc tgccggcccg ggcagagccg gtcggcaacc tgcgttcggt ggccgccagc
     5881 gacagccgcg acggcgtgca gggctgggac ctgcagaccg acaagggcgc gcgcatccgc
     5941 atcgaactgc cggcgaccga catcatccgc gtgcaggccg gccgcaatgg cacgctgacc
     6001 ggcgcgggcg acaaggccgc gccgatcgta ctgccgcaac cgcaggcgaa cgtaaaggcg
     6061 cagctggaag aagacgcgca ggaaatccgc gtgcgtaccg atgcgctggt gctgcatgtg
     6121 cagcggcagc cgttgcgcct gcgcctggag cgactggaca acggccagcc caccgcgctg
     6181 tggcaggaac tgcagccgct ggacctggat gccacgcaga gcgtgcaggt gctgtcctcg
     6241 caggctgacg aaggctactt cggtggtggc cagcagaacg gccgttacca gttcaagggc
     6301 cgcgagctgg aggtgtccta ttccggtggc tgggaagagg gcgaccgccc gagcccggca
     6361 cccatgctgc tcagcagccg cggctggggc atgctgcgca acacctggag cgatggcagc
     6421 tacgacctgc gccagcccga ccaggccacg ctgctgcatc gcgaagatcg gtttgatgcg
     6481 tactacttcg tcggcgccga cctgccgaag ctgatcgaac gctacaccca gctgaccggc
     6541 cgcccgaaca tggtcgcgcg ctgggcgctg tcctatggcg atgccgattg ctacaacgac
     6601 ggcgacaatg cgaagaagcc gggtaccgtg cccgagggct ggagcgacgg cccgaccggc
     6661 accacccccg acgtgatcga cagcgtggcc aagcagtacc gcgcgcacga catgcccggt
     6721 ggctggatcc tgcccaacga tgggtatggc tgcggttaca agcagttgcc ggaaacggtg
     6781 aagggcctgg ccggctacgg cttccgcacc ggcctgtgga ccgagaacgg cgtcgacaag
     6841 atcgcctggg aagtgggcaa ggccggcagc cgcgtgcaga agctggacgt ggcctggacc
     6901 ggcaagggct accagttcgc gatggacgcc aaccgccagg cgttcaacgg catcctcgac
     6961 aactccgatt cgcgcccgtt cctgtggacg gtgatgggct gggccggcat ccagcgctac
     7021 gcagtggcct ggaccggcga ccagagcagc agttgggact acatccgctg gcacgtgccg
     7081 accctggtcg ggtcgggcct gtccggcatg gcctacgcca gcggtgacgt tgatgcgatc
     7141 ttcggcggca gcgccgaaac cttcacccgt gatctgcagt ggaaggcgtt caccccggtg
     7201 ctgatgggca tgagcggctg gtcgtcgaac gcgcgcaagc acccgtggtg gtacgacgag
     7261 ccctaccgca gcatcaaccg cgattacctg aagttgaaga tgcgcctgac cccgtacatg
     7321 tacgggctgg tgcacgaggc cgcgcagacc ggcgcgccgc cggtgcgtgg cctgatgtgg
     7381 gacaacccgc gcgatccgca tgcgcaggat gagacctaca agtaccagtt cctgctcggc
     7441 cgcgacctgc tggtggcgcc ggtataccgc agccaggcag ccagtcgtgg ctggcgccgc
     7501 gacatccacc tgccggctgg cggctggatt gattactggg atggccgccg cgtgcaggcc
     7561 gccgccgacg gacgccagct ggatcgccag gtcgacctgg ccacgctgcc ggtattcgta
     7621 cgtgccggtg cgatcctgcc gatgtacccg tcgatgctgt tcgacggtga aaagccgctg
     7681 gatgaggtga cgttcgacct gtacccgcag ggtgattcgc agtacacgct gtacgaagac
     7741 gatggcaaca cccgccgtta ccagcaaggc gagtcgagca cgcaggtgat ccgcgtgcag
     7801 gcaccggcgc agggtagtgg cccggtgcag gtgcagatcg atgcggtgca gggccagtac
     7861 aacggccagc tggcgcagcg tcgctatggc ctgcgcgtac tcagccggca ggcgccgcgt
     7921 gcggtgcagg ctggcggccg cgcgctgcct gcgttggctg acgccgccgc cttcaacact
     7981 gcggccgaag gctggtactt cgacgcccag gagcgccgcg gaacgctgca tgtgcgcaca
     8041 accgcgcagg acatccgcca accgctgcag ctgcagctgg acttcgcggt agccgctgcc
     8101 gtcgccgatg atgcctaccc cgccgcgccg gtgctcggcc gcgaactgcc ggccgacagc
     8161 ctgctggtgg tcaaccgccc ggccgaagag cccggccatg ctctggaaaa cgccttcgac
     8221 gacgatcccg gcacctggtt ccgcagcgtg cgcaaccagg cggtgcgcac cggggcacac
     8281 gagtgggtga tcggctttgg cgagcgcagg atgatcgatg gcatcgacat cgccccgcgc
     8341 aacgacaaga actggaagca cggccaggtg cgcgattacg aggtgtacct gggcgacagc
     8401 aatggcgagt ggggcgagcc gattgcccgt ggccgcctgc agctgaagga aggcgtgcag
     8461 cgcatcgact tcccggcgca tgcaggccgc ctgctgcggt tccgcgtgct gagcgtgcag
     8521 aacccggagg gcgacggcgc cagcagcacc gacccgatgg tcaccgcagc gcagggcagt
     8581 gcccgcgcct tcgatgcgct gcagccgcgc gacgtcggcc cgatcgcgct gtccaccttc
     8641 cacatccttg agcaccagga accggagcga ccggcccggc agcgctatct ctccgagctg
     8701 ccggtgccgg ccgcgctggc cagccaggtg cgcgccgacc agtcgttccg tggcgatgcc
     8761 ggcatgcgca tgaacggcct gcagttccgc cgtggcctgg gcgtggccgc caacagccgc
     8821 atcgacctgc gcctgcaggg cggctggcgc ctgctgcgcg ccgacctcgg catcgacgac
     8881 gcgtgccgca ctgccggtgg cctgcagttc caggtctggg gcgacaaccg cctgctgtac
     8941 gacagcggcc tggtgaaggc gcccggcgtg gtcaagccgg agctggacat ccgtggcctt
     9001 tccaccctga gcctgcgcac gctgggtgcg cagggcagcc aacccgccca ggtctgtgcc
     9061 aactgggcca acgccgtgct gatcggccag gagggcgact ccgccagcat cgtcgcccca
     9121 tgaccccctc gtaacaccgc tcctcccccc gcccataccg actacggccc tgctggccgt
     9181 ggcccgggag cgttttgccc gccgatccac cattcgcgcc gcacccctgc caggagagaa
     9241 ccccgatgtt gcccgcacgc caccaccgcc ccccctgtcg ctcgatcgct ccgctgacgc
     9301 tggccattgc cggcgtgctg ctctcggtcg ccgttcctgc cgttgcacaa gagagcaagg
     9361 acaaggccac cgacctggcc cgcatcgagg tgaccggctc caacatccgc cgcaccgacg
     9421 ttgaaaccgc ctcgccggtg caggtgatca gcaagcagga catccagaac atgggtgcgc
     9481 gcacgctgct gcaggtgctg gacaacctgc cggcggctcg cccggcacag caggacgcgc
     9541 gttcgctgtt caccggttcc gacggtgctt cgcaggccaa cctgcgcggg ctgggtgcac
     9601 agggcacgct ggtgctgctg aacggtcgtc gcctttcgta ctacggcgca ccggccggct
     9661 tccagaccca gttcgtcaac attgatgcga ttccggccgc ggccatcgag cgcatggaag
     9721 tgctgaccga cggcgcctcg gcggtgtacg gcaccgacgc ggtggccggc gtgatcaacg
     9781 tgatcaccaa gcgcaacttc cagggtgccg aagtcagctt caccaacgac acctcctcgc
     9841 gcatcgactc ctacggcgaa cgccaggcca gcatcaccgc cggcttcggc gacctggccg
     9901 agaaccgctt caacatctac ggcgcggtga acatgtaccg ccgcgacgcg attccgctga
     9961 gcgacttcta cgacaagcgg ccggaccagt actacgtcaa caacccgaac tacctcaaca
    10021 acctgcgcct gggcgtgggc agcaagccgg gcgagttcaa cccgggcagc tacttcgcgt
    10081 ttgatccggt caccggccgt cgcgtgcagg aggcggcacc gggctgcaag aacgtgctga
    10141 ccagtgaagc ggccggcccg cgttgcgtct gggaaacctg gatgaacaac gagatcgatg
    10201 ccggcgccaa gtccgagcgc aacaccgcct acctcaacgg caccttcctg gtgggcgaca
    10261 gcaccgagat cttcgccgag gcgacctaca ccgacatcga cctgcgcgcc aacggtggca
    10321 ccccgcgcac ctacggcacc accaccggca acccgaccag ctggttctcg cgcaataccg
    10381 gcaacaacgt caatcagttc ctgtatccgt tcctgggccc gaacaacgag tacaaccacg
    10441 ccagcccgga aatgaaggcg atgatgggcg gcgtggtcgg cctgcagtac ctgctgcagg
    10501 atgccggcgc caactacttc ggccagcgca acaccgacaa gagctaccgt gtgctggccg
    10561 gcgcgcgcgg caacgtgggc gactggaact gggaaaccgc gttcgccagc gccggcaccc
    10621 actccaccac ctaccagacc atcaacgtca acaccaaggg cttcgagaag gccttcggcc
    10681 cgtacacgat cgatccgggc actggccgcg tgatcatttc cgatcatccg gcgtacaagt
    10741 tcggcgagat cagcgaagcc aacgccgcac tgatccgtga agccttcccg accttcgaca
    10801 tccagtcgtg gacgcgcctg cataccctgg acggcaagat cgaaggaccg ctgttccagc
    10861 tgccggccgg cgagatgcgt gcagcgttcg gcttcaacgc cagccgcgaa accttctaca
    10921 ccccgggcaa cgccgatgcg gccaacggcc tgatcaccca gcagggcggc tcgtggttcg
    10981 acggcaagcg caacacctat gcgctgttcg ccgagaccgt ggcgccgatc accgacaagc
    11041 tggagctgga tgcggcggtg cgcgtggaca agtacccgaa cttcagtgcc aacatcgcac
    11101 cgaagatcgg cttcaagtac caggccttcg atcagctgat gctgcgcggt acctactcca
    11161 ccggcttccg cgcaccgagc ctggccgagt ccggcaacgg cggcgtgttc gcacagctgg
    11221 gcggcttccg cgacgagctg cgctgcaacg agaccaacgc catcgccaac ctgctgctga
    11281 agtcgcagcg gccgggcgat gtcgacctcg gcaagaccct gctgaacgtc gattgcaacc
    11341 gtaccgtggc acgcatgacc cagccgaaca aggacctgaa gccggagaag gcgaagatcg
    11401 ccacccttgg cttcgtctac gagccggcga gctggctgtc ggtgtcggcc gactactggt
    11461 tcatctaccg caacaacgag atcgttgcgc cggactaccg ccgcatggaa gacatcatct
    11521 cgatgtcgcg ctcgccgatc accgacagcg accgggccaa cctggcgcag ctggcggcga
    11581 tgtgcgccga tccggccagc ggcgtgagct gcccggcgaa cctgccgggc tattcggcgg
    11641 gcaacgtggc cagcgtggtc ggccagtaca agaaccgtgg caagaccctg atcgacggct
    11701 tcgacatcga tgcgcgcagc cgcttctcgc tgggtgactg gggcaacctg aacatcggcc
    11761 tggccgccac catcgccaac cgcaaccgct tctacatgga cgcggagaac ggctggtact
    11821 acggcgatgt ggtgggttac tacaacaacc cgcgcctgcg tgccacgctc aatgccgact
    11881 ggacctacaa gcaggtcacc accagcatgt ttgtcaacta tgtgggcggc accaagtggg
    11941 ccaccgacca ggtcgacgaa gtgagcaaca acaaggaaac ctgcaccggc ggttacctgg
    12001 cactgcagaa gagcaagtgt gacggtgcac cgtcgtggtg gaccgccaac atgagcgtca
    12061 cctggcgccc ggatgatgcc tggaacctga gcttcaccgt caagaacctg ttcaaccgcc
    12121 tgccgttcta tgacccgaac agcttcctgg gtgactccag tgactacgcg accatcttcg
    12181 gtcgtggtta cagtgtgacc atcggctacc ggttcaagta attccgtt
//
LOCUS       DAOKIP010000121        12081 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.121,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000121 DAOKIP010000000
VERSION     DAOKIP010000121.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 12081)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12081)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12081
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.121"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(145..1431)
                     /locus_tag="QEL58_002668"
     CDS             complement(145..1431)
                     /locus_tag="QEL58_002668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011038183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HDS1677122.1"
                     /translation="MSDPQWQLETLAVHGGYRPDPTTRAVAVPIYQTVAYAFDDTQHG
                     ADLFDLKVPGNIYTRIMNPTTDVLEQRLAALEGGIGALALASGQAAITYAIQTIAEAG
                     DNIVASSALYGGSLNLLAHTLPQYGIQARFADPADPAAFAGLIDERTKAVFVESIGNP
                     RGNVTDIAAIAEVAHAAGVPLIVDNTVATPFLLRPFDHGADIVVHSLTKYLGGHGNSL
                     GGAIIDSGRFDWAAQPKRFARLNQPDPSYHGVVYTEALGPAAYIGRARVVPLRNTGAA
                     LSPFNAFLILQGIETLALRMERINANALAVAQFLKSHAKVAWVRYAGLVDDPEHTAAQ
                     RYLRGHGSGVLTFGLPGGREAGARFLDALKLFTRLVNLGDAKSLATHPASTTHRQLDA
                     AELAKAGVSEDTVRLSIGIEHIGDLRADLEQALANA"
     gene            1614..2351
                     /locus_tag="QEL58_002669"
     CDS             1614..2351
                     /locus_tag="QEL58_002669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDS1677123.1"
                     /translation="MQPSPWTPAASCAPTPVLLVEDDRRLAELVSDYLHEHGFAVQHV
                     ARGDLAGAACRQHAPELVVLDLMLPGLGGIDVCRQIRSFSDVPILMLTACEDDIEQVL
                     GLESGADDYVHKPVEPRLLLARLRALLRRRHGSSNSGTPCRLMHGELLIDRMQREVHL
                     HGLPVELGTTEFEILWLLASQPGQILSRDQILQAVRGIGFDGLDRSVDVSIGKLRRKL
                     GDDAREPRRIKTVWGRGYQFNPSAWSA"
     gene            2348..3637
                     /locus_tag="QEL58_002670"
     CDS             2348..3637
                     /locus_tag="QEL58_002670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010481562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component sensor histidine kinase"
                     /protein_id="HDS1677124.1"
                     /translation="MKRLFLWLWFVTSACFLVSVFVLNHILDGIYLPVQDRVFAEQVR
                     GQVYALRAGLAGMDAAQQRVRVQQWQPHYGIALTLLETPPVLDAQEQAHLQAHGFIVR
                     DRYQQILLPIEDAGGRWLHLRLPGEVLMTTYMSIAAYLSILLLVGASLYAWVRLLWRD
                     LEALRLHADRIGAGDLQARAQVSPRSQIRVIVDHSNRMAARVAELVQRQRDLTHAISH
                     ELRTPIARVAFGLDLMQDSDDRARRASLAQGLHGDLAELNRLVSELLAYERLEHPNEG
                     EPLQRIEANDWLQACLADARRDAERAGLALRVQPSALPRVDAEPRLLQLALSNLVGNA
                     LRHAHSQVEVSLVGVGGRACLRVDDDGPGIAEADREKVMRPFTRLDDSRSRDTGGFGL
                     GLAIVNRIAARHGGELHVSRATLGGARLEMHWPLAGS"
     gene            3778..4578
                     /locus_tag="QEL58_002671"
     CDS             3778..4578
                     /locus_tag="QEL58_002671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006386820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MipA/OmpV family protein"
                     /protein_id="HDS1677125.1"
                     /translation="MSQRHRTPSLLCLALLPLFAAPIAHAKDDHWTFEVAAGAGVTPR
                     YSGSKDFQASPMVSFDALSPGGWFLGTSGIGWGTAIGEHAHVRAYIGASGSRRDKDSA
                     LGGSDFLRGMGDIRSRPLVGLSAGYTLGEAVLSGTWQFTRKDEDRGDNGLATQQMHLS
                     LDLPLFDLAGGVVSGSVSTEYGNRGYMQTWYGVSPEQAARTGFAQHKPKAGLVSAGLG
                     LKWSHRVGRNGNWYISAEGTRLLGDAADSPIVQKPNQFGLMSGYTHRF"
     gene            complement(4646..7231)
                     /gene="clpB"
                     /locus_tag="QEL58_002672"
     CDS             complement(4646..7231)
                     /gene="clpB"
                     /locus_tag="QEL58_002672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006386822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent chaperone ClpB"
                     /protein_id="HDS1677126.1"
                     /translation="MRMDKLTSRFQQALADAQSLAVGRDNSIIEPVHLFSALLDQQGG
                     STRPLLAQAGVNVPVLRERLTEALDALPKVSGQAGNVSMGNDLGRLLNQTDKLAQQHG
                     DAFIASEWFVLAALEDGGTLGMALRAAGADKTRLQTAIDKLRGGENVQSENAEEQRQA
                     LEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEG
                     LAQRIINDEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERLKGVLNDLAKSEGQIILF
                     IDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEKDAALERRFQ
                     KVFVGEPSVEDTIAILRGLKEKYAVHHGVEITDPAIVAAATLSNRYITDRQLPDKAID
                     LMDEAASRLRMEIDSKPEELDRLERRVIQLKIQREMLKKEKDEASRQRLADLENDIDA
                     LEREFSDLNEIWKSEKAALQGATKIKEQVEQAKLELESAQRRQDFARMSEIQYGLLPQ
                     LEKQLAAAQEAEHKDFKLVQDRVTDEEIAEVVSRWTGIPVNKMLEGERDKLLRMEEVL
                     HNRVVGQEEAIKVVSDAVRRSRAGLSDPNRPAGSFLFLGPTGVGKTELCKSLAEFLFD
                     SADAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSLILLDEVEKA
                     HPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQDMSSDDSPEAYTQM
                     KAAVMGVVQAHFRPEFINRLDDIVVFHPLDKQQIKQIARIQMRGLEKRLAERGLKLVV
                     SDAAFDLLGNVGFDPVYGARPLKRAIQAQLENPLAQKILSGAFVNGDTIEVGNDGGHL
                     VFAKA"
     gene            7484..7978
                     /locus_tag="QEL58_002673"
     CDS             7484..7978
                     /locus_tag="QEL58_002673"
                     /inference="COORDINATES: protein motif:HMM:NF009180.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HDS1677127.1"
                     /translation="MPPHHEQLGVLYRDHRAWLQGWLSGRVGNRDVADDLTQDTFARL
                     LQGRDLAALREPRAFLTTVARGLAANWFRRQALERAYLEYLAQFPEPVLPSLEEQALV
                     REALQQIDAMLDGLPAMARRVFLLAQFDGLRYEAISEQLGLSLSTVKRHMKRALMGCL
                     AHAG"
     gene            7968..8936
                     /locus_tag="QEL58_002674"
     CDS             7968..8936
                     /locus_tag="QEL58_002674"
                     /inference="COORDINATES: protein
                     motif:HMM:NF016648.1,HMM:NF027545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FecR domain-containing protein"
                     /protein_id="HDS1677128.1"
                     /translation="MPAETAAASALPPRVLEQAADWMMRLHEDDSAARRAQWQHWHDA
                     DPAHARAWQRAERLLALTAQVPTALAQRTLQPPASAGRRAVLRSVAALLVAPLGGWLA
                     WRLWDDAAWDASARTAVGERSQQVLDDGSVLHLDTGTAVDVAFDAHARLLRLRHGQML
                     VETAADPQRPARPFRVTTPYGTLQALGTRFSVRLFGDDALLVVQHGAVRISTPGQQRQ
                     VDAGQQLRWNLTRLPPPKPAPPGADAWVRGMLVADAMPLQQVLQELGRYQHRWLRVDP
                     HVAGLPVSGAFPLDDLQRSLSMLAATHALRIEQGLWIHVSAAGHRG"
     gene            8990..11779
                     /locus_tag="QEL58_002675"
     CDS             8990..11779
                     /locus_tag="QEL58_002675"
                     /inference="COORDINATES: protein motif:HMM:NF019335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDS1677129.1"
                     /translation="MTVNLPRLRLSLLATALAATPALAQSPPDESLHVQRSTVSLGSA
                     LGAFAAEHGVALSFDPALTHGRQAPSIATGLDVDAGFDALLHGSGLRAVRRADGSYTL
                     QRAQVPAGARRTSTLHVPGQDTGSTFGGSLQLDRNYVAAQAAGNGDITRLLRIHPAVQ
                     FDNADQGSFSPGEIRPAEISINGAKFYQNAFIVDGMNFNNDIDPGADPEVYRLFSVPG
                     GSQALALDSSLLEDVTVHDSNVSAAYGGFNGGVVEASTRRPSRTFSGRLSTQSSRSSW
                     TRYHLDAAVADSYQKASGANDGQPEFKKTTTRADLEGYLTDRIGVLASFTRKRSTIPT
                     YNLQSHLVDDAHSEKQIQRRSIDNLFVKAIWEASETLDIEASFTHAPEESHYFRSNVP
                     GAGIDIIGGGRQAMLKATWSPQWGTLTQQVGWSSTEQSRHPQSADYMSWHWAEGKDWG
                     ASGSSLEGEFGDIDQAQKTLQYRADLILAPRRWLGMEHRFAAGVQYQHQDVDYERLDD
                     TYIYVSPARTTSCTNKAGITDTQTCWMGLTRTGRANTSNWPGQFFTSRTYYTRGRLDF
                     QIDSWSAYAEDSIRAGRLSLRPGLRIDHDSYMQHTTVAPRLAMSLDLDAAGDTQLIAG
                     ANRYYGRNAATWRLRDGLDRLQYRNQRRPTLDSEWTAGTQTANGLHFDRLRIAYDDEL
                     MLGVKQQWKGWEFLGKVVNRKGRDQVVRSSSRVQDERADDPSLATHYETWSNDGRSET
                     QIISLTVRPLRRLQFGGTSTTGLLALDWTDSRSSAPDYEDDFSTAYYENPIIRYDGSY
                     IRYRDRPADNFTRPWTARLATTTHIPAARLTWGNTLRYRAGYRAIRDTGLKDVHDGQS
                     VAVWERRRFAPSLIWDMRIGWEQPLSTMGTVFANVDVFNVLDRRAVNGVSSSVSRAPY
                     YEMGRSFWLEVGYRF"
     gene            11815..>12081
                     /locus_tag="QEL58_002676"
     CDS             11815..>12081
                     /locus_tag="QEL58_002676"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c peroxidase"
                     /protein_id="HDS1677130.1"
                     /translation="MLVSAVLASAAQPRPSQPVCAPAPGKAERWDGACLRALYSSPST
                     RWPAPEVEPGVAWKELAPLPSPVGPPDNPSTPAKVALGRRLFFDP"
BASE COUNT         1949 a         4150 c         3953 g         2029 t
ORIGIN      
        1 ggcacaaaaa aaatccccgg tcgacccgca tcgaccgggg atctggatcg ccacgttgcc
       61 acgccttgga gaggcagttc caccgtagcg catcgcagcg cccgtggtga tcgcctgtgg
      121 cgatgacgac caagcccgtg gctatcaggc gttggccagg gcctgctcca ggtccgcgcg
      181 caggtcgccg atgtgctcga tgccgatcga cagccgcacg gtgtcttcgc tgacgccggc
      241 cttggccagt tcggccgcgt ccagctggcg atgggtggtc gaggccggat gggtggccag
      301 tgatttcgca tcgcccaggt tgaccaggcg ggtgaacagc ttcagcgcat cgaggaagcg
      361 cgcgccagct tcgcgcccgc ccggcaggcc gaaggtcagc acgcccgagc cgtgtccgcg
      421 cagatagcgc tgcgcggcag tgtgctcggg gtcgtcgacc aacccggcat agcgcaccca
      481 ggccaccttg gcgtgcgact tcaggaactg cgcgacggcc agtgcgttgg cattgatgcg
      541 ctccatgcgc agggcgagcg tctcgatacc ctgcaggatc aggaatgcat tgaacggcga
      601 cagcgccgcg ccggtgttgc gcaacggcac cacccgcgcg cggccgatat aggcggccgg
      661 ccccagcgct tcggtgtaga ccacgccgtg gtagctcggg tcgggctggt tgaggcgggc
      721 gaagcgtttt ggctgcgccg cccagtcgaa gcggccggag tcgatgatcg cgccgccgag
      781 gctgttgcca tggccgccca ggtacttggt cagcgagtgc accacgatgt cggcaccgtg
      841 gtcgaacggg cgcagcagga acggggtggc cacggtgttg tcgacgatca gcggcacgcc
      901 tgccgcgtga gcgacttcgg cgatcgccgc gatgtcggtg acgttgccac gcgggttgcc
      961 gatcgactcg acgaacaccg ccttggtgcg ctcgtcgatc agccctgcaa acgcagcagg
     1021 atcggccgga tcggcgaagc gcgcctggat gccgtactgc ggcagcgtgt gcgcaagcag
     1081 gttgaggctg ccaccataca gcgcactgga cgcaacgatg ttgtcaccgg cctcggcgat
     1141 ggtctggatc gcgtaggtga tcgccgcctg tcccgaggcc agtgccagtg cgccgatacc
     1201 gccttccagc gcggccaggc gctgctccag cacgtcggtg gtggggttca tgatgcgcgt
     1261 gtagatgttg ccgggcacct tcaggtcgaa caggtcggca ccatgctggg tgtcatcgaa
     1321 ggcataggcc acggtctggt agatcggcac cgctaccgcg cgggtggtcg ggtcgggacg
     1381 gtagccgccg tgcacggcca gggtttccag ttgccactgc gggtcgctca ttgcaccagg
     1441 ctccatccgg ggaaaccgcc aacataggcc aagcgcggcc acctgctgaa agccgctggc
     1501 gatgacgccc ataccgccgg ttatcaggtt ggccgcgatt caggcagccg tcatggcccg
     1561 ttgctaggct tcgccgccgg gcgatcctgc ccgggcacgg aggcccaata cgcatgcagc
     1621 cctctccctg gacacccgcc gccagctgcg cgccgacccc ggtcctgctg gtggaagacg
     1681 atcgccgcct ggccgagctg gtcagcgact atctgcacga acatggcttc gccgtgcagc
     1741 acgtggcccg cggcgacctg gccggcgcgg cgtgccgcca gcatgcaccg gaactggtgg
     1801 tgctggacct gatgctgccg ggcctgggcg gcatcgatgt gtgccggcag atccgcagct
     1861 tttccgatgt gcctatcctg atgctgaccg cctgcgaaga cgatatcgag caggtactgg
     1921 gcctggaatc gggcgccgac gactacgtgc acaagccggt cgagccgcgc ctgctgctgg
     1981 cccgcctgcg cgccctgctg cgccgccgtc atggcagcag caactccggc acgccgtgcc
     2041 ggttgatgca tggcgaactg ctgatcgacc ggatgcagcg cgaagtacac ctgcacgggt
     2101 tgccggtaga gctgggcacg acggaattcg agatcctgtg gctgctggcc agccagccgg
     2161 ggcagatcct ctcgcgtgac cagatcctgc aggcagtgcg cggcatcggt ttcgatgggc
     2221 tggaccgcag cgtcgatgtc agcatcggca agctgcgccg caagcttggc gacgacgcac
     2281 gcgaaccccg gcggatcaag accgtgtggg gccgcggcta ccagttcaat ccctcggcct
     2341 ggtcagcatg aagcgcctgt tcctgtggtt gtggttcgtc accagtgcct gtttcctggt
     2401 gtcggtgttc gtcctcaacc acatcctgga cggcatctac ctgccggtac aggatcgcgt
     2461 gttcgccgag caggtgcgcg ggcaggtgta tgccctgcgc gccgggctgg ccggcatgga
     2521 cgctgcacaa cagcgcgtgc gcgtgcagca gtggcaaccc cactatggca tcgcgctgac
     2581 cctgctggag acgcctcccg tgctcgacgc gcaggagcag gcccacctgc aggcacacgg
     2641 cttcatcgtc cgcgatcgtt accagcagat cctgttgccc atcgaagatg ccggcggccg
     2701 ctggctgcac ctgcgcctgc ccggcgaggt gttgatgacc acctacatgt ccatcgccgc
     2761 ctacctcagc atcctgctgc tggtcggggc cagcctgtat gcctgggtcc gcctgctgtg
     2821 gcgtgatctg gaagcgctgc gcctgcatgc cgaccgcatc ggtgccggcg acctgcaggc
     2881 acgggcgcag gtgtcgccac gctcgcagat ccgggtcatc gttgaccatt ccaatcgcat
     2941 ggccgcgcgc gtggccgagc tggtgcagcg ccagcgcgac ctgacccacg cgatctcgca
     3001 tgaactgcgc acgccgattg cgcgcgtggc gttcgggctg gacctgatgc aggacagcga
     3061 cgatcgcgca cgtcgcgcaa gtctggcgca gggcctgcac ggcgacctgg ccgaactcaa
     3121 ccggctggtg agcgaactgc tggcctatga acgcctggaa caccccaatg agggagagcc
     3181 gctgcagcgc atcgaggcca acgactggct gcaggcctgc ctggccgatg cgcgccgcga
     3241 cgccgaacgc gcgggcctgg cactgcgtgt gcagcccagc gcgctgccgc gggtggatgc
     3301 cgagccgcgc ctgctgcagc tggcactgag caacctcgtg ggcaacgccc tgcgccatgc
     3361 gcattcgcag gtagaggtgt cgctggtggg cgttggcggc cgcgcctgcc tgcgcgtgga
     3421 tgacgacggc cccggtatcg ccgaggccga ccgcgaaaaa gtgatgcggc cattcacccg
     3481 gctggatgac agtcgcagcc gcgataccgg tggtttcggg ctgggcctgg ccatcgtcaa
     3541 ccgcatcgcg gcgcgccacg gcggcgaact gcatgtcagc cgcgccacgc tgggcggtgc
     3601 acgcctggaa atgcactggc cgctggctgg aagctgaacg ccaacgggcg cgattacatt
     3661 tgattacaac tcccgcacaa ctgcggacgg atcagtcgcc ggcgaatcgc cacgctgtcg
     3721 accctgcagc gcgcgccgga tgcgcgtgct gcattcctcc cattgtcgag agaacccatg
     3781 tcccagcgtc accgtacccc gtccctgctc tgcctggccc tgctgccgct gttcgccgcg
     3841 ccgatcgccc atgccaagga tgaccactgg accttcgaag tcgccgccgg tgccggcgtg
     3901 accccgcgct acagcggcag caaggacttc caggcgtcac cgatggtgtc cttcgacgcc
     3961 ctgtcacccg gtggctggtt tctcggcacc agtggcatcg gctggggcac ggcgatcggc
     4021 gagcatgccc acgtgcgcgc ctacatcggc gccagcggca gccgccgcga caaggactcc
     4081 gccctcggcg gttccgactt cctgcgcggc atgggtgata tccgtagccg tcccctggtc
     4141 ggcctttcgg ctggttatac gctgggagag gccgtgctga gcggcacctg gcaattcacc
     4201 cgcaaggacg aagaccgtgg cgacaacggc ctggccaccc agcagatgca cctgagcctg
     4261 gacctgccgc tgttcgacct ggccggtggc gtggtcagcg gcagcgtctc caccgagtat
     4321 ggcaatcgtg gctacatgca gacctggtac ggcgtcagcc cggagcaggc cgcgcgtacc
     4381 ggttttgccc agcacaagcc gaaggccggg ctggtgagcg ccggcctcgg cctgaagtgg
     4441 agccatcgcg tgggccgtaa tggcaactgg tacatctcgg ccgaaggcac gcgcctgctc
     4501 ggcgacgccg cggacagccc gatcgtgcag aagccgaacc agttcggcct gatgagcggc
     4561 tacacgcacc gcttctaaga gcgggccggg cccggcgttg cccacgggaa acggggcgct
     4621 gcgctcaggc agcgccccga tggactcacg ccttggcgaa caccaggtgg ccgccgtcgt
     4681 tgccgacttc gatggtgtca ccgttgacga aggcgccgga aaggatcttc tgcgccagcg
     4741 gattttctag ctgtgcctgg atcgcgcgct tcaacggacg cgcgccatac accggatcga
     4801 agccgacgtt gcccagcagg tcgaacgcag catcggacac caccagcttc aagccgcgct
     4861 cggccaggcg cttttccagg ccgcgcatct ggatgcgcgc gatctgcttg atctgctgct
     4921 tgtccagcgg gtggaacacc acgatgtcgt ccaggcggtt gatgaactcc gggcggaagt
     4981 gcgcctgcac cacgcccatc accgccgcct tcatctgcgt gtaggcctcc gggctgtcat
     5041 cactgctcat gtcctggatc tggtgcgagc ccaggttcga ggtcatcacg atgacggtgt
     5101 tgcggaagtc cacggtgcgg ccctggccat cggtcaggcg accgtcgtcc agcacctgca
     5161 gcaggatgtt gaacacatcc ggatgcgcct tctccacttc gtccagcagg atcagcgagt
     5221 acgggcgacg acgcaccgcc tcggtcaggt aaccaccctc ttcgtaaccc acgtagcccg
     5281 gaggggcacc gatcaggcgg gcgacgctgt gcttctccat gaactcgctc atgtcgatgc
     5341 ggatcatcgc gtcggcactg tcgaacagga actcggccag cgacttgcac agctcggtct
     5401 tgcccacgcc ggtcgggccg aggaacagga acgagccggc cgggcggttc ggatcggaca
     5461 ggccggcacg cgagcggcgc acggcgtcgg aaacgacctt gatcgcttcc tcctggccga
     5521 ccacgcggtt gtgcagcacc tcttccatgc gcagcagctt gtcgcgctca ccttcgagca
     5581 tcttgttgac cggaatgccg gtccagcgcg acacgacctc ggcgatctcc tcgtcggtaa
     5641 cccggtcctg caccagcttg aagtccttgt gttcggcctc ctgcgcagcg gccagctgct
     5701 tttccagctg cggcagcagg ccgtactgga tctcgctcat ccgggcgaaa tcctggcggc
     5761 gctgcgccga ttccagctcc agcttggcct gctcgacctg ctccttgatc ttggttgcac
     5821 cctgcagcgc ggccttctcc gacttccaga tttcattgag gtcggagaac tcgcgctcca
     5881 gcgcatcgat gtcgttttcc agatcggcca ggcgctggcg cgaagcctcg tccttttcct
     5941 tcttcagcat ctcgcgctgg atcttcagct ggatcacacg acgttccagg cgatccagtt
     6001 cctccggctt ggagtcgatc tccatgcgca ggcgcgaggc cgcctcgtcc atcaggtcga
     6061 tggccttgtc cggcagctgg cggtcagtga tgtagcggtt ggacagcgtg gccgccgcca
     6121 caatggccgg atcggtgatt tccacgccgt ggtgaacggc gtacttctcc ttcagcccgc
     6181 gcaggatggc gatggtgtct tccaccgacg gctcgcccac gaataccttc tggaagcggc
     6241 gctccagcgc ggcgtccttt tcgatgtact tgcggtactc atccagcgtg gtggcaccga
     6301 cgcaatgcag ttcgccgcgt gccagcgccg gcttcagcat gttaccagcg tccatcgcgc
     6361 catcggcctt gccggcgccg accatggtgt gcagctcatc gatgaacagg atgatctgcc
     6421 cttcgctctt ggccaggtcg ttgagcacac ccttcaggcg ctcctcgaat tcaccgcgga
     6481 acttggcacc ggcaatcagc gcgcccatat ccagcgacag cacgcgcttg ccgcgcaggc
     6541 cctcgggcac ctcgtcattg atgatgcgct gggccaggcc ttcgacaatg gcagtcttgc
     6601 ctacgccggg ttcgccgatc agcaccgggt tgttcttggt ccggcgctgc agcacctgga
     6661 tggtgcggcg gatttcctcg tcacggccga tcaccggatc cagcttgccg ctctcggcgc
     6721 gcgcggtcag gtcgatggtg tacttttcca gcgcctgccg ctgctcttcg gcattctccg
     6781 actgcacgtt ctcgccgcca cgcagcttgt cgatggcagt ctgcaggcgc gtcttgtcgg
     6841 caccggcggc gcgcagcgcc atgcccagcg tgccgccatc ctccagcgcg gccagcacga
     6901 accactcgct ggcaatgaag gcatcaccgt gctgctgggc cagcttgtcg gtctggttca
     6961 gcaggcgccc caggtcgttg cccatcgaga cgttgccggc ctggccggac accttgggca
     7021 gtgcatccag cgcctcggtc aggcgctcgc gcagcaccgg tacgttcacc ccggcctggg
     7081 ccagcagcgg gcgcgtgctg ccgccctgct ggtccagcag cgcgctgaac aggtgaaccg
     7141 gttcgatgat gctgttgtcg cggcccacgg ccagcgactg tgcgtctgcc agcgcctgct
     7201 ggaaacgcga ggtgagcttg tccatccgca ttgcgaaacc tcatcggtga tcagggccgg
     7261 ccgctgccgg cgatgctgga aagatgcggc tgccccatcc cgtttcaagg gtgactgcga
     7321 ctgcatccgg aggccagtca gcccgcggcc agcatgccgc accgcatgtt gccgccgcgt
     7381 tgatcctgcg caagccagtg cgcgtcgggc actggaatcc ccacatcgcg gatgcgatac
     7441 ttgcgaatca ttctcatttc gatcaaggcc gcgcaccccg tccatgcctc cccaccacga
     7501 acaactgggc gtgctgtacc gcgatcaccg ggcctggctg cagggctggc tgagcggtcg
     7561 cgtaggtaat cgcgatgtgg ccgatgacct cacccaggac accttcgccc gcctgctgca
     7621 gggccgcgac ctggccgcgc tgcgcgagcc gcgtgccttc ctgaccaccg ttgcgcgcgg
     7681 gctggccgcc aactggttcc ggcgccaggc actggagcgc gcctacctgg agtacctggc
     7741 gcagtttcca gagccggtgc tgccctcgct ggaggaacag gcgctggtgc gtgaggccct
     7801 gcaacagatc gacgcgatgc tcgatggtct gcccgcgatg gcacgtcgcg tcttcctgct
     7861 ggcgcagttc gatgggctgc gctatgaggc catcagcgag cagctggggc tgtcgttgtc
     7921 gacggtgaag cggcacatga agcgagcgct gatgggctgc ctggcgcatg ccggctgaga
     7981 ccgccgccgc atcggccctt ccgccgcgcg tactggagca ggcggccgac tggatgatgc
     8041 gcctgcacga ggacgacagc gcggcgcgac gcgcgcaatg gcaacactgg cacgatgccg
     8101 atccggcaca cgcccgcgcc tggcagcgcg cggagcgtct gttggcgctg accgctcagg
     8161 tgcctacggc gctggcccag cgcaccctgc agccgcccgc gtctgctggg cgccgcgccg
     8221 tactgcgcag cgtcgccgct ctgctggtgg cgccactcgg tggatggctg gcctggcggt
     8281 tgtgggacga cgcggcgtgg gatgccagtg cgcgcacggc ggtgggcgag cgctcccagc
     8341 aggtgctgga cgatggcagc gtgctgcacc tggataccgg cactgcggtc gacgtcgcat
     8401 tcgatgcgca tgcgcgcctt ctgcggctgc gccatgggca gatgctggtg gagacagccg
     8461 ccgatccaca acgcccggcg aggccgttcc gggtcacgac cccctacggc acgctgcagg
     8521 cacttggcac ccgtttcagc gtgcgcctgt tcggagacga cgccctgctg gtcgtccagc
     8581 acggcgcggt gcggatctcc acaccgggtc aacagcgcca ggtcgacgcc gggcagcagc
     8641 tgcgctggaa cctgacccgg ctgccacctc ccaagcctgc accacccggc gctgacgcgt
     8701 gggtccgggg catgctggtc gccgatgcaa tgccgctgca gcaggttctg caggagctgg
     8761 ggcgctacca gcaccgctgg ctgcgcgtgg atccgcacgt cgccggcctg ccggtgtccg
     8821 gcgcattccc gctggacgac ctgcaacgca gcctgtcgat gcttgccgcc acccatgcgc
     8881 tgcggatcga gcaggggctg tggatccacg tgtcggctgc gggacatcgc ggctgacact
     8941 tttccgagcg tcgcgtggca gagggtatga acccctcact ttcctcccca tgaccgtgaa
     9001 cctgccccgg cttcgactga gcctcctcgc caccgcgctc gccgccacac ccgcgctggc
     9061 tcaatcaccg cccgatgaat ccctgcacgt ccagcgcagc actgtctcgc tgggcagtgc
     9121 actgggcgcg ttcgccgccg agcatggcgt ggccctgtcc ttcgaccccg cgctgaccca
     9181 tggccgccag gctccatcga ttgccacagg cctggacgtg gacgcaggat tcgacgcact
     9241 gctgcatggc agcgggctgc gcgcggtgcg gcgcgccgat ggcagctaca ccttgcagcg
     9301 tgcgcaggtg ccggcaggcg cacgacgcac cagtaccctg cacgttccgg ggcaggacac
     9361 cggttcgacc ttcggaggca gcctgcaact ggaccgcaac tacgtcgcgg cgcaggccgc
     9421 tggcaacggt gacatcaccc ggctgctgcg catccatccc gccgtgcagt tcgacaatgc
     9481 cgaccagggc agcttcagcc ccggtgaaat ccgccccgcg gagatcagca tcaatggtgc
     9541 gaagttctat cagaacgcgt tcatcgtcga tggcatgaac ttcaacaacg acatcgaccc
     9601 tggcgccgat ccggaggtgt accggctgtt ctccgttcca ggcggctcgc aggcgctggc
     9661 actggacagc agcctgctgg aagacgtcac cgtgcatgac agcaacgttt cggccgccta
     9721 tggtggattc aacggcggcg tggtcgaagc gagcacccgg cgaccatcac gcaccttcag
     9781 cggccgcctg tccacccagt cctcgcgatc ttcgtggaca cgctaccacc tggacgccgc
     9841 cgtcgcagac agctaccaga aggcatccgg cgcgaatgac gggcagccgg aattcaagaa
     9901 gaccaccacg cgcgccgatc tggagggcta tctgaccgac cgcatcggcg ttctggccag
     9961 tttcacccgc aaacgctcga ccattcccac ctacaacctg cagtcccacc tggtcgacga
    10021 cgcgcattcg gagaaacaga tccagcggcg cagcatcgac aatctgttcg tcaaggcgat
    10081 ctgggaggcc agcgagacgc tcgacatcga ggcaagcttt acccatgcgc cggaggaatc
    10141 ccactacttc cgctccaacg tccccggtgc cggcatcgac atcattggcg gcggccgcca
    10201 ggcgatgctc aaggcgacat ggtcgccgca atggggcact ctgacccagc aggtgggctg
    10261 gagttctacc gagcagtccc gccatccgca gtctgcggac tacatgagct ggcactgggc
    10321 cgagggcaag gactggggag cctcaggcag ctcgctggaa ggtgaattcg gcgatattga
    10381 ccaggcgcag aagacgctcc agtaccgtgc cgatctgata ctggcaccgc ggcgctggct
    10441 gggcatggag catcgtttcg cggcaggcgt ccagtaccag caccaggatg tcgactacga
    10501 gcgcctggac gacacctaca tctatgtctc gccggcgcgc accaccagct gtaccaacaa
    10561 ggccggcatc accgacacgc agacctgctg gatgggcctg acccgcaccg gccgcgccaa
    10621 caccagcaac tggcccggac agttcttcac cagccgcacc tattacaccc gcggccggct
    10681 ggacttccag atcgacagct ggagcgccta cgccgaagac agcatccgcg cggggcgcct
    10741 gtcgttgcgc cccggcctgc gcatcgacca tgacagctac atgcagcaca ccacggtcgc
    10801 accgcgcctg gcgatgtcac tggatctcga cgccgccggc gacacccagc tgatcgcggg
    10861 tgccaaccgc tattacggcc gcaacgcggc cacgtggcgg ctgcgcgatg gccttgatcg
    10921 gctgcaatac aggaaccagc gccgccccac gctcgacagc gagtggaccg caggcacgca
    10981 gaccgccaac gggctgcatt tcgatcgcct gagaatcgcc tacgacgatg agctgatgct
    11041 gggcgtcaag cagcaatgga agggctggga gttcctcggc aaggtcgtca accgcaaggg
    11101 gcgtgaccag gtcgtgcgtt ccagcagccg ggtgcaggac gaacgcgcgg atgacccttc
    11161 gctggccacc cactacgaaa cctggagcaa cgacggccgc agcgagacgc agatcatcag
    11221 ccttaccgtg cgccccctgc gccgcctgca gttcggcgga accagcacca cgggcctgct
    11281 ggcgctggac tggaccgaca gccgctcttc tgcgcccgac tacgaggacg acttcagcac
    11341 cgcgtactac gagaatccga tcatccgtta cgacggcagc tacatccgtt accgcgatcg
    11401 tccggcagac aacttcaccc gcccatggac cgcgcgactg gccaccacca cgcatatccc
    11461 ggcagctcgg ctgacctggg gcaatacgct gcgctaccgg gccggctatc gcgcgatacg
    11521 ggacaccgga ctgaaggatg tccatgacgg ccagagtgtt gcggtctggg aaagacggcg
    11581 gtttgcccct tcgttgatct gggacatgcg cattggctgg gagcagccgt tgtcgacgat
    11641 gggcacggtg ttcgccaacg tggatgtgtt caacgtgctg gatcggcgcg cggtgaatgg
    11701 cgtatccagc agcgtcagcc gcgcgccgta ctacgaaatg ggacgctcgt tctggctcga
    11761 agtgggctac cggttctgag gcccgcgcgc cgccgcaggc ttggctggag tgcagtgctg
    11821 gtcagcgcag tgctggccag cgctgcacag ccacgtcctt cccagccggt ctgcgcgcct
    11881 gctccgggca aggcggaacg ctgggatggc gcctgcctgc gtgcgctcta cagcagcccc
    11941 agtacgcgct ggcccgcgcc ggaggtcgaa cccggcgtgg cgtggaagga actggcccca
    12001 ctgccgtcgc ccgtaggtcc accggacaat ccatcaacac cagccaaggt ggcgctgggg
    12061 cggcggctgt tcttcgatcc g
//
LOCUS       DAOKIP010000122        12060 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.122,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000122 DAOKIP010000000
VERSION     DAOKIP010000122.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 12060)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12060)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12060
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.122"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(6..3068)
                     /locus_tag="QEL58_002677"
     CDS             complement(6..3068)
                     /locus_tag="QEL58_002677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012509926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HDS1677131.1"
                     /translation="MRGWVRRQEWRPPAVEVGDVEDSFAHEASRLHKEDRPMPALKRA
                     LARPLRAITWGGVLLGVLLVAGLATMLVNDHQRRLEAAQRQSRALAVGSERLLALELR
                     NLERAMSGIAADAVELFRSVPVQAPALLDAAIGGVLRRHAELHSIVVLDSYGRALTAG
                     QGDLQLPLWTDPQRRGQGSALYIGPPQRAGDGGWVVPLALPMAGDRWLLARLRCGELQ
                     RIVGGLDVGPNGLVSISDADGYMLARVPDPHGTVGRRYDLPRRDLLGKQAVVELGSLP
                     GAVDGVPRIITISTLERSPLAVQVGLADEDVLAPWWPYLQASVAIVLAYIAVLLALLY
                     AVRRSTRRQQSMAEELKAGHAELRLAHQVGRVCTWYVDEDAALLRWSPLAREIFGVQT
                     DALPVADFFARVHRDDAARLQQAFDQAFAGGAVLDQVFRLVLPGGEVRWVGARGQRVE
                     VDDSERRMIGALTDLSERYQAREQMSEVERRFRLLFDRNPAPFWVFDPDTLRFIEVND
                     AAVRQYGYSRDEFLAMSILDIRPREGWDEVKGAIAKARVGELQDATVRLHRRKDGSVF
                     EVRTHLSKLDFDGQPACLVLAEDVSERLAYERDLAYQARHNPATGLLNVRALTGQLDE
                     QDAGYTIAFVQLRGLQLVADTLGREIGDAVLQSMATRLGGLGARCGTLAFQPAEDFVF
                     AIGTGHDTQRVLDDLLQIVSAPMRGKDSLHQFEPRIGVAVHVPGDGYSAEQVIGMAAQ
                     AAHAARAEGNVVVWFDAAVTTRLADRLRLAGRIHAAIDNEFQLYFQPIRHAGDGSPAA
                     LEALLRWPQADGSFIPPNEFIQLCEETGLILALGRWVIRAAAKAQRRLVEAGWGELPI
                     AVNVSAVQFFNSDLVAEFTRAQQEFGLARGALHVELTESSLMRKPAQAMQTMQRLHEQ
                     GISVSLDDFGTGYSSMSYLQHLPLDILKIDRSFVADVETNPRNASICRALLSLGHSMG
                     LTIIAEGVETPGQLDWLAAHGCDQVQGYLLGRPAPLEQIIDALDEVPA"
     gene            3245..5356
                     /locus_tag="QEL58_002678"
     CDS             3245..5356
                     /locus_tag="QEL58_002678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010484133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M13 family metallopeptidase"
                     /protein_id="HDS1677132.1"
                     /translation="MSKLRRPTLALAIIASLSLAACDRPADPAAGTAAPADAAPAAAK
                     PMLGSFGFDASGMDRSIAAGDDFFGFANGTWVKNTEIPADRSRFGSFNVIAEKTLADT
                     RAILEGAAGNAQASGDDKLIGDYYAAYMDEAAIEQHGIAPVQPQLKAIDAIADKAGLA
                     RALGGDMRADVDLLNATNFYTDRLFGLWVSVDMLQPDRTAPYLVQGGLGMPDRDFYLG
                     GGRMAELRKQYQAYIAQMLQLAGAADPAGKAQRILALETKIAQAHATQEETNDVTKGA
                     NPWTQADFNAKAPGMDWNAFLDAAALGNQQDFIVWQPKAVAGLSKLVATEPLDAWKDY
                     LAFHALDRAAAYLPKKFADARFAFHGTALSGTPQQSDRWKRAVDDANHAVGEAIGKRY
                     VEKHFDAKTKERADEMAKNIIAAFAKRIDALSWMSPQTKAHAKAKVAGLTVGMGYPEK
                     WRDYTGLEIRRDDALGNAQRAELFEYQRNIAKLGKAVDHSEWAMLPQTINAMNVPLEN
                     RLVFPAAILQPPFFDGAADDAVNYGAIGAVIGHEISHGFDNAGALFDETGKLHNWWTA
                     EDLKQFNAAGDALAAQFSSYEPFPGVHVNGKLTLGENIADVAGLGTAYDAYQLSLQGK
                     PGQTLEGFSPDQRFFLGFAQAWRSKSREQALRNSLLTDVHAPGQFRALTVRNIDAWYP
                     AFEVKEGQKLYLAPDKRVKVW"
     gene            complement(5463..6635)
                     /locus_tag="QEL58_002679"
     CDS             complement(5463..6635)
                     /locus_tag="QEL58_002679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005412115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDS1677133.1"
                     /translation="MSAASPAHAVPPVRHPWWAVSAVGLATFSVVTTEMLPVGLLTPI
                     AEALGASTGTAGLMISLPALLAALFAPLVVIAAGGIDRRRILCALLGLLTVANIASAL
                     APSISWLLAARVLVGFCMGGIWAIAGGLAARLVPAHRVGLATSIIFGGVAAASVLGVP
                     LGALIGDALGWRCAFAAMALFSAAILLLQPAVLPALPVARSIRPMQFVQQLGHRGLRQ
                     GLWLTLLLVAGHFIAFTYVRPLLTNVSGVQASWIGGLLFAYGLAGIVGNFVAGPLAAR
                     HPRGVLLAIASGLLLTPLLLLWMGGTPAGGITVLLLWGLAYGGVSVGLMGWMMKAVPH
                     GVEIATALYVGVFNIGIAAGAWVGGRLLDSTGLHANLWAAAVLAASALLMVATTRR"
     gene            complement(6632..7849)
                     /locus_tag="QEL58_002680"
     CDS             complement(6632..7849)
                     /locus_tag="QEL58_002680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005407902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDS1677134.1"
                     /translation="MATPYRDLFAAPGTAGLALAGLLARLPLPMTGIGIITLLSQLRG
                     SYALAGAVSATFVLTYALLSPQVSRWVDRYGQARVLPWAAAASATGLLLLLACTVMAA
                     PDAMLFGAAMLAGCMPSVSAMVRARWTAIHRGRPALQTAYSLETVFDEVTFIAGPPLS
                     VGLAVAVWPQAGVLVAALLLVVGVAALVLQRGTEPPLQSREEAGLPSRSLLRQAEIRL
                     LALLMLAMGVIVGTVDITSVAFAEQRGQPLAASAVLSAYALGSCAAGLLFGALKLQVP
                     MPRLLLLGAAATALTTLPLPWAGTLPALAAAVLLAGLFFAPTMIVAMSLVEQRVPASR
                     LTEGMTWLLAGLNIGVALGAALSGYSVDAGGVRSGFVIALVAGAVVLLVALSACRALR
                     RPVPSLCAEGVVP"
     gene            7983..8570
                     /locus_tag="QEL58_002681"
     CDS             7983..8570
                     /locus_tag="QEL58_002681"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005407901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HDS1677135.1"
                     /translation="MVRRTRAEMEETRASLLATARRVFSEHGYAATSMDDLTAQAGLT
                     RGALYHHFGDKKGLLAAVVGQLDAETDRRLQAISDSADDAWDGFVQRCRAYLQMALEP
                     EIQRLVLRDARAVLGGASPESQRHCVQSMQRLIEQLIAQGVIMPVDAQALASLIYGSL
                     AEAAFWIAEGEDGDARLAQATAALEMLLRGLKPAG"
     gene            8926..9540
                     /locus_tag="QEL58_002682"
     CDS             8926..9540
                     /locus_tag="QEL58_002682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014035825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677136.1"
                     /translation="MIALFKGLGLLLRDNELYSSPFEKQVAHWRSLSEQQIRDEVAVL
                     AQAKCQWLIASIVGWQAASLLILGLITNYLWRDDYHITFTRVVVVFGSWISILFVIWF
                     MANMFDRTAGFERWMKAFNSRARISSKADSVEHVAEALDLAEHYPEVLDYKQAVTARR
                     ELRHEDIRIMTEIGRMKQHSELVGRLNHVGENEHHHDLTLQPAY"
     gene            complement(9580..9924)
                     /locus_tag="QEL58_002683"
     CDS             complement(9580..9924)
                     /locus_tag="QEL58_002683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019336400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677137.1"
                     /translation="MRLFLLACVAALSLGGCEKSSTTSITRTQANGVDTLYSKGTVVE
                     GQARFQCIASRSGQCHYVVLDPACSTDAACAKPPLRRFAVAVGKTEAMRDLPKGFRQC
                     VSQDPIEQCHRE"
     gene            complement(9943..10713)
                     /locus_tag="QEL58_002684"
     CDS             complement(9943..10713)
                     /locus_tag="QEL58_002684"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014035823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDS1677138.1"
                     /translation="MPLEALIAEDEELLRQSLVEQLGRLWPELKLVAECEDGATALEQ
                     LAEKQPDIAFLDIRMPGISGIEVARALSELSPRTQVVFVTAYDQYAIDAFEQGAMDYL
                     LKPVSDERLLATRERILSRLPSTRQDDAVLERLLQRLGPSQAGAERPPLAWITASNGR
                     ETQLIMLEDVAYFRADNKYTTVVTAAGESLLRTPLRELLEVLDPQHFRQIHRSTIVNM
                     KAVAAVSRDDTGRGVLRLRQRAETLVVSQPFMSLFRGM"
     gene            complement(10703..11962)
                     /locus_tag="QEL58_002685"
     CDS             complement(10703..11962)
                     /locus_tag="QEL58_002685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010484138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HDS1677139.1"
                     /translation="MFASLSLILRHLLAWAAALFVAGMVWSGIFSGMNDGPGWVFGLL
                     VMFLMISALGSAVTHVRRVWLVAGRLDGATLSGRQRRQIELPMDAGHAFAVVEAAVGE
                     LPRVEEVESSAGSLQVRAYVRRVDLWNGRQPSRWNLPARLAIKRNSVLATVTPGQGTS
                     TVTLLFEPDAGWWADLLALDEGSNYENAEAVTRAISRRVADQRRDEQAAAEQTQVEKE
                     LSVARLNLLHAQVEPHFLYNSLANAQVLTRTDPARAEQMLGHLIQYLRSSLPQVDESV
                     STLGVELERTRAYLEILRIRMGARLSVEVQVPNELHGVHLPAMALQTLVENAIKHGLE
                     PKPGGGTIWILARGFDDHVTVTVADDGLGFGQGTSGTGIGLKNLRERLRLTCGEQAGV
                     AIVANFPSGVAATMTLPQSGKERSHAA"
BASE COUNT         2103 a         4271 c         3969 g         1717 t
ORIGIN      
        1 gccgctcagg cggggacttc atccagcgcg tcgatgatct gctccagcgg cgccggccga
       61 cccagcaggt agccctgcac ctggtcgcag ccgtgtgcgg ccagccagtc cagctgcccc
      121 ggcgtctcca cgccttcagc gatgatggtc agccccatgc tgtggcccag cgacagcagc
      181 gcgcggcaga tcgacgcgtt gcgcgggttg gtttccacat ccgcaacgaa gctgcggtcg
      241 atcttcagga tgtccagcgg caggtgctgc aggtaggaca tgctggagta accggtgccg
      301 aagtcatcca gcgacacgct gatgccctgc tcgtgcaggc gctgcatggt ctgcatcgcc
      361 tgcgccggct tgcgcatcag gctgctctcg gtcagctcca cgtgcagcgc accgcgggcc
      421 agcccgaact cctgctgggc gcgggtgaac tcggccacca ggtcactgtt gaagaactgc
      481 acggccgaga cattcaccgc gatcggcaac tcgccccagc cggcctcgac cagccggcgc
      541 tgcgccttcg ccgccgcgcg gatcacccag cggcccagcg ccaggatcag cccggtctcc
      601 tcgcacagct ggatgaactc gttgggcggg atgaagctgc catcggcctg cggccagcgc
      661 agcagggcct ccagcgcggc cgggctgcca tcgccggcat gccggatcgg ctggaagtac
      721 agctggaatt cgttgtcgat ggcggcatgg atgcgcccgg ccaggcgcag gcggtcggcc
      781 agccgcgtgg tcaccgccgc atcgaaccac accaccacgt tgccttccgc acgcgctgca
      841 tgggccgcct gcgcggccat gccgatcacc tgctcggcgg agtagccgtc accgggcaca
      901 tgcacggcca cgccgatgcg tggctcgaac tggtgcagcg aatccttgcc ccgcatcggc
      961 gccgacacga tctgcagaag atcatccagc acgcgctggg tatcgtggcc ggtaccgatg
     1021 gcgaacacga agtcctccgc tggctggaac gccagcgtgc cgcagcgcgc gcccagccca
     1081 cccagccgcg tcgccatcga ctgcagcacc gcatcgccga tctcacggcc cagcgtatcg
     1141 gccaccagct gcaggccacg caactgcacg aaggcgatgg tgtagcccgc gtcctgctcg
     1201 tccagctgtc cggtcagcgc gcgtacgttg agcaggccgg tagccgggtt gtgccgcgcc
     1261 tggtaggcga ggtcgcgctc gtaggccagc cgttcgctga catcctcggc cagcaccagg
     1321 cacgcgggct ggccatcgaa gtccagcttg gacaggtgcg tgcggacttc gaacacgctg
     1381 ccgtccttgc gccggtgcag gcgcacggta gcgtcctgca gttcgccgac gcgggccttg
     1441 gcgatggccc ctttcacctc gtcccaacct tcgcgcgggc ggatgtcgag aatgctcatc
     1501 gccaggaatt catcgcggct gtagccgtac tggcgcaccg cggcatcgtt gacctcgatg
     1561 aagcgcagcg tgtccgggtc gaacacccag aacggtgccg ggttgcggtc gaacagcagg
     1621 cggaagcggc gttccacctc gctcatctgc tcgcgtgcct gatagcgttc gctcaggtcg
     1681 gtcagcgcac cgatcatgcg ccgctcgctg tcgtccacct ccacccgctg cccgcgcgcg
     1741 cccacccagc gcacctcgcc accgggcagc accaggcgga acacctggtc gagcaccgcg
     1801 ccaccggcga aggcctggtc gaaggcctgc tgcaggcgcg cggcatcgtc gcggtgcacg
     1861 cgcgcaaaga aatcggcgac cggcaaggca tcggtctgca cgccgaagat ctcgcgcgcc
     1921 agcggcgacc agcgcagcag tgcggcatcc tcgtccacgt accaggtgca gacacggccg
     1981 acctggtgcg ccaggcgcag ttcggcatgg ccggctttca gttcctcggc catcgactgc
     2041 tggcggcggg tgctgcggcg cacggcatac agcagcgcca gcaataccgc gatgtaggcc
     2101 agcacgatcg ccaccgaggc ctgcaggtag ggccaccatg gcgccagcac gtcctcgtcg
     2161 gccagcccga cctggaccgc cagcgggctg cgttccaacg tactgatggt gatgatgcgc
     2221 ggcacgccat cgaccgcgcc cggcaggctg cccagctcga ccaccgcctg cttgccgagc
     2281 aggtcgcggc gcggcaggtc gtagcggcgg ccgaccgtgc catgagggtc cggcacgcgg
     2341 gccagcatgt agccatcggc gtcgctgatc gagaccagtc cattggggcc gacatcgagg
     2401 ccaccgacga tgcgctgcag ttcgccacag cgcagccgtg ccagcaacca gcggtcgcca
     2461 gccatcggca gcgccagcgg taccacccag ccgccatcgc cggcccgctg cggcgggccg
     2521 atgtacagcg cgctaccctg gccacggcgc tgcgggtcgg tccacagcgg cagctgcagg
     2581 tcgccctggc cggcggtcag cgctcggccg tagctatcga gcacgacgat gctgtgcagt
     2641 tcggcatggc gccgcagcac gccaccgatg gcagcgtcca gcaacgccgg tgcctgcacc
     2701 ggcacgctgc ggaacagctc cacggcatcg gcggcgatgc cggacatcgc ccgctccagg
     2761 ttgcgcagct ccagcgccag caggcgttca ctgcccaccg ccaacgcgcg gctctggcgt
     2821 tgcgcggcct ccagccggcg ctggtggtcg ttgaccagca tggtggccag gcccgccacc
     2881 agcagcacgc ccagcagcac gccgccccag gtaatggcgc gcagtggccg ggccaacgcc
     2941 cgcttcagtg cgggcatcgg tcgatcttcc ttgtgcagtc ggctggcttc atgcgcgaac
     3001 gaatcctcca cgtccccgac ctcaacggcc ggcggacgcc attcttgacg cctgacccaa
     3061 ccccgcatgg ccacctcccc gtgaccgcgc agggctcccg ggaccagcat gcaccacccc
     3121 gatgacggcg tgaagatcgc atcggcgcgt tcagccagat cctgcacagg acaggcggca
     3181 caacgggacg gccaggcggg ccggagcgga ttagacttgg ggttttccgc tgcaagagaa
     3241 gtccatgtcc aagctgcgcc gtcctaccct ggcactggcc atcatcgcca gcctgtccct
     3301 ggccgcctgc gaccgcccgg ccgatccggc cgccggcacc gctgcgccgg ccgatgcggc
     3361 gcctgccgca gccaagccga tgctgggcag cttcggcttc gatgccagcg gcatggaccg
     3421 cagcatcgcc gccggcgacg atttcttcgg cttcgccaac ggtacgtggg tgaagaacac
     3481 cgagattccg gccgaccgtt cgcgcttcgg cagcttcaac gtcatcgccg agaagaccct
     3541 ggccgacacc cgcgccatcc tcgaaggcgc cgccggcaac gcccaggcca gcggcgacga
     3601 caagctgatc ggcgactact acgccgccta catggacgaa gccgccatcg agcagcacgg
     3661 catcgcgccg gtgcagccgc agctgaaggc catcgatgcg atcgccgaca aggccgggct
     3721 ggcccgcgcc ctgggcggcg acatgcgcgc cgacgtcgac ctgctcaacg ccaccaactt
     3781 ctataccgac cgcctgttcg gcctgtgggt gtcggtggac atgctgcagc cggaccgcac
     3841 cgccccttat ctggtgcagg gcggcctggg catgcccgac cgtgacttct acctgggcgg
     3901 cggccgcatg gccgaactgc gcaagcagta ccaggcctac atcgcgcaga tgctgcagct
     3961 ggccggcgcc gccgacccgg ccggcaaggc gcagcgcatc ctcgcgctgg agaccaagat
     4021 cgcgcaggcg catgccaccc aggaagaaac caacgacgtg accaagggcg ccaacccctg
     4081 gacccaggct gacttcaacg ccaaggcccc gggcatggac tggaacgcct tcctcgatgc
     4141 ggctgcactc ggcaaccagc aggacttcat cgtgtggcag cccaaggccg tcgccggcct
     4201 gtcgaagctg gtggccaccg aaccgctgga cgcctggaag gactacctcg ccttccacgc
     4261 gcttgaccgc gccgccgcct atctgccgaa gaagttcgcc gacgcccgtt tcgctttcca
     4321 tggcaccgcg ctgagcggca cgccgcagca gagcgaccgc tggaagcggg ccgtggatga
     4381 cgccaaccat gcggtcggcg aagccatcgg caagcgttac gtcgaaaagc acttcgacgc
     4441 caaaaccaag gaacgtgcgg acgagatggc gaagaacatc atcgccgcct tcgccaagcg
     4501 catcgatgca ctgtcgtgga tgtcaccgca gaccaaggca cacgccaagg ccaaggttgc
     4561 cggcctgacc gtgggcatgg gctatccgga gaagtggcgc gactacaccg ggctggagat
     4621 ccgccgcgat gacgcgctgg gcaatgcaca gcgcgccgag ctgttcgagt accagcgcaa
     4681 catcgccaag ctgggcaagg cggtcgacca cagcgagtgg gcgatgctgc cgcagaccat
     4741 caacgcgatg aacgtgccgc tggaaaaccg cctggtgttc ccggccgcca tcctgcagcc
     4801 gccgttcttc gacggagccg ccgacgacgc ggtgaactac ggtgcgatcg gtgcggtgat
     4861 cggccacgag atcagccatg gcttcgacaa tgccggcgcg ctgttcgatg aaaccggcaa
     4921 gctgcacaac tggtggaccg ccgaagacct caagcagttc aatgccgccg gtgacgcgct
     4981 ggccgcgcag ttcagcagct acgagccgtt cccgggcgtg cacgtgaacg gcaagctgac
     5041 cctgggcgag aacatcgccg acgtggccgg cctgggcact gcctacgatg cctaccagct
     5101 ttcactgcag ggcaagccgg gccagaccct ggaaggcttc agcccggacc agcgcttctt
     5161 cctcggcttc gcccaggcat ggcgcagcaa gagccgcgag caggcactgc gcaattcgct
     5221 gctgaccgac gtgcatgcac cgggccagtt ccgcgcactg accgtgcgca acatcgacgc
     5281 ctggtacccg gcgttcgaag tgaaggaagg ccagaagctg tacctggccc cggacaagcg
     5341 ggtcaaggtg tggtgatgta accggaacgg gcgccgcagg gcgcccgttt cattttccgg
     5401 cctcgctctg gtgggtgccg accttggtcg gcacggggca ggaatccacc cacggtgtga
     5461 atctacctgc gggtagtggc aaccatcagc agagcgctcg cagccaacac cgccgcagcc
     5521 cacagattgg cgtgcagccc ggtgctgtcc agcagcctgc ctccgaccca cgcccctgct
     5581 gcaatgccga tgttgaacac accgacatac aacgcggtgg cgatttccac gccatgtggc
     5641 accgctttca tcatccagcc catcaggccg accgacacac cgccgtaggc cagcccccac
     5701 agcagcagca ccgtgatgcc tccggccggc gtgccgccca tccacagcaa cagcagcggc
     5761 gtcagcagca ggcccgaggc gatggccagc agcacgccac gcggatggcg tgcggccagt
     5821 ggcccggcaa cgaaattgcc gacgatgccg gccaggccat aggcaaacag cagtccgccg
     5881 atccacgacg cctgcacacc cgaaacgttc gtcaacaacg gacgcacgta ggtgaaggcg
     5941 atgaagtgcc cggccaccag cagcagggtc agccacaggc cctggcgcag gccgcgatgg
     6001 ccgagctgct gcacgaactg catcggccga attgacctcg ccaccggcaa cgcgggaagc
     6061 accgcaggct gcagcagcag tatcgccgca ctgaacagcg ccatcgccgc gaacgcacag
     6121 cgccagccca gcgcgtcgcc gatcagtgca ccgagcggca cgcccagcac cgacgccgcg
     6181 gccacgccgc cgaagatgat cgaggtggcc aggccgacgc ggtgcgcggg caccagccgt
     6241 gcggccaatc caccggcgat ggcccagatg ccgcccatgc agaacccgac cagtacgcgc
     6301 gcggccagca gccagctgat gctgggcgcc agcgcggagg cgatgttggc cactgtcagc
     6361 aggccgagca gtgcacacag gatgcggcgg cgatcgatgc caccggcggc gatcaccacc
     6421 agcggtgcga acagcgccgc cagcagggcc ggcagcgaga tcatcaggcc ggcggtaccg
     6481 gtggacgcgc cgagcgcttc ggcaatcggg gtcagcaggc cgaccggcag catctcggtg
     6541 gtgaccaccg agaacgtggc caggccaacc gcgctgacgg cccaccatgg atggcgcaca
     6601 gggggcacgg catgcgcagg cgaagcagca ctcacgggac gactccttca gcgcagagag
     6661 agggaacagg cctgcgcagc gcacggcagg cagacagcgc gaccagcagc accacggcgc
     6721 ccgccaccag cgcgatcacg aagccgctgc gcacgccacc ggcatcgacg ctgtacccgg
     6781 acagcgccgc gcccagcgca acgccgatgt tcaatccggc cagcagccag gtcatgcctt
     6841 cggtaagccg cgatgcgggc acgcgctgtt cgaccagcga catcgccacg atcatcgtcg
     6901 gcgcgaagaa cagcccggcc agcagcaccg ccgccgccaa cgcgggcagc gtgccggccc
     6961 acggcagtgg cagcgtggtc agggcggtcg ccgctgcccc cagcagcaac agccgcggca
     7021 tcggcacctg cagcttcaac gcaccgaaca gcaggccggc cgcgcaactg cccagcgcat
     7081 aggccgagag caccgcactg gctgccagcg gctgcccgcg ctgctcggcg aacgccacgc
     7141 tggtgatatc gacggtgccg acaatcacgc ccatcgccag catcagcaac gccagcaggc
     7201 ggatctccgc ctgccgcagc agagaacgcg aaggcaaccc ggcttcttcg cgcgattgca
     7261 gcggcggctc ggtgccccgt tgcagcacca gcgcagccac gcccaccacc agcagcaggg
     7321 ccgccaccag cacgccggcc tgcggccaca ccgccaccgc cagccccacc gacagcggtg
     7381 gcccggcgat gaaggtgacc tcgtcgaata ccgtctccag cgagtacgcg gtctgcaacg
     7441 ccgggcgccc gcgatggatc gcggtccagc gcgcgcgcac catcgccgac acgctgggca
     7501 tgcagccggc cagcatcgcc gcgccgaaca gcatcgcgtc cggcgccgcc atcacggtgc
     7561 aggccagcag caacagcagg ccggtcgcgc tggccgcggc ggcccacggc agcacccgtg
     7621 cctggccgta ccggtcgacc cagcgtgaca cctgcggcga cagcaacgcg taggtcagca
     7681 cgaaggtggc cgacaccgca ccggccagcg catagctgcc gcgcagctgc gacagcaggg
     7741 tgatgatgcc gatgccggtc atcggcagcg gcaggcgggc cagcaacccg gccagggcaa
     7801 gcccggccgt gccgggcgca gcgaacaggt cgcgataagg ggtggccatc aggatctcca
     7861 gagcggcggc ttgcctggcg cgcggggcgc cacgacaata catacagggc gtatgaataa
     7921 gaggctacat tcatacgcgt cgtatgtaaa taatcatgca ctgcgtatgt aaggagctct
     7981 ggatggtccg ccgcacccgc gccgagatgg aagaaacccg cgccagcctg ctggccaccg
     8041 cccgccgtgt gttcagcgag cacggctatg ccgccacctc gatggatgac ctgaccgcgc
     8101 aggccgggct cacccgtggc gcgctgtacc accacttcgg cgacaagaag ggcctgctgg
     8161 cggcggtggt tggccagctt gatgccgaga ccgatcggcg cctgcaggcg atcagcgaca
     8221 gtgccgacga cgcctgggac ggcttcgtgc agcgctgtcg cgcctacctg cagatggcgc
     8281 tggaaccgga aatccagcgc ctggtgctgc gtgatgcgcg tgcagtgctg gggggcgcct
     8341 cgccggaatc gcagcggcac tgcgtgcagt cgatgcagcg cctgatcgaa cagttgatcg
     8401 cgcagggcgt gatcatgccg gtggatgcgc aggcgctggc gtcgttgatc tacggcagcc
     8461 tggccgaggc ggcgttctgg attgccgaag gcgaggatgg cgatgcgcgc ctggcgcagg
     8521 cgacggccgc gctggagatg ctgttgcgtg ggttgaagcc ggccgggtaa cgcccctgct
     8581 cgcagggcgt gggtctacgg tgcatacccg cgttgccgga ggctggccgg ggtcggcatc
     8641 cacccgccgg gttgcgcggt cgggcccgat tccgggcgat caccgcgccg atggccggtc
     8701 tgcgtgctca gccgcggttt catgtgcggc tgcagcacgt ttcaccctgc gacatcctgt
     8761 cgcaggctgt gactgcgatg ctgcaatgca gcaacattca cccattcaga caaaaccctt
     8821 accgcgcttg gcatttcgcc cattgcacgg ctcgctggaa gtgctagaac tgaacccgcc
     8881 acaccgtcca atgctgatcg acgcacgttc cacaaggagc cagccatgat tgctttgttc
     8941 aagggtttgg gactactgct tcgcgacaac gagctctaca gcagcccgtt cgaaaaacag
     9001 gttgcgcact ggcgcagcct cagcgagcag cagatccgcg atgaagtggc tgtgctggcc
     9061 caggccaagt gccagtggct gatcgcctcg atcgtcggct ggcaggcggc ctcgctgctg
     9121 atcctcggcc tgatcaccaa ctacctgtgg cgcgacgatt accacatcac cttcacccgc
     9181 gtggtcgtgg tgttcggctc gtggatctcg atcctgttcg tgatctggtt catggccaac
     9241 atgttcgacc gcacggccgg cttcgagcgc tggatgaagg ccttcaacag ccgcgcccgc
     9301 atcagttcca aggccgacag tgtcgagcac gtggccgagg cactggacct ggccgagcac
     9361 tatccggaag tgctggacta caagcaggcg gtcaccgcca ggcgcgagct gcgccatgag
     9421 gacatccgca tcatgaccga gatcgggcgc atgaagcagc actccgaact ggtcggacgc
     9481 ctcaaccatg tgggcgagaa cgagcatcac cacgacctga cgctgcagcc agcctactga
     9541 cccttctgga aagcgggggg acccacaatg ccaccgtgat cactcacggt ggcattgttc
     9601 tatcgggtcc tggctgacgc actggcggaa gcccttgggc aggtcgcgca ttgcttcggt
     9661 cttgcccacc gccaccgcga accggcgcag cggtggcttg gcgcaggccg catcggtgct
     9721 gcaggccggg tccagcacca catagtggca ctggccgctg cggctggcga tgcactggaa
     9781 ccgcgcttga ccctcgacca cggtgccttt gctgtacagc gtatccacgc cgttggcctg
     9841 ggtacgggtg atcgaggtgg tgctggattt ctcgcagccg cccagtgaca gcgcagcgac
     9901 gcaggcaagc aggaacaggc gcatggtgcc tccagggtgt ggttacatgc cgcggaacag
     9961 gctcatgaac ggttggctga ccaccagggt ttccgctcgc tggcgcaagc gcagcacgcc
    10021 gcgcccggta tcgtcgcggc tcaccgctgc caccgctttc atgttgacga tggtggagcg
    10081 gtggatctgg cggaaatgct gtggatcgag cacttccagc agctcgcgca acggcgtgcg
    10141 cagcaggctt tcgccggcgg cggtgaccac ggtggtgtac ttgttgtcgg cgcggaagta
    10201 ggccacgtcc tccagcatga tcagctgcgt ctcgcggcca ttgctggcgg tgatccaggc
    10261 cagtggcgga cgctccgcgc ctgcctgcga tgggcccaat cgctgcagca ggcgctccag
    10321 cacggcatcg tcctgccgcg tcgatggcag ccgcgacagg atgcgctcgc gggtcgccag
    10381 cagccgctcg tcgctgaccg gcttcagcag gtaatccatc gcgccctgct cgaaggcgtc
    10441 gatggcgtac tgatcgtagg cggtcacgaa caccacctgg gtacgcgggc tcagctcgga
    10501 cagcgcgcgc gccacttcga tgccactgat gccgggcatg cggatgtcga ggaaggcgat
    10561 gtccggctgc ttctcggcca actgctccag cgccgtggcg ccgtcctcgc actcggccac
    10621 cagcttcagc tccggccaca ggcggcccag ctgctccacc agggattgcc gcagcagttc
    10681 ctcgtcttcg gcgatcagtg cttcaagcgg catggctgcg ctccttgccc gactgcggca
    10741 gggtcatggt cgcggccacg ccgctgggga agttggcgac gatcgccacg ccggcctgct
    10801 caccgcaggt caggcgcagg cgctcgcgca ggttcttcag gccgatgccg gtgccgctgg
    10861 tgccctggcc gaagccaagg ccatcgtcgg ccacggtcac ggtgacgtgg tcgtcgaagc
    10921 cgcgcgccag gatccagatt gtgccaccgc cgggcttcgg ttccagcccg tgcttgatgg
    10981 cgttctccac cagcgtctgc agcgccatcg ccggcaggtg cacgccatgc agctcattgg
    11041 gcacctgcac ctccaccgac aagcgtgccc ccatgcggat gcgcaggatt tccagatagg
    11101 cgcgggtgcg ttccagctcc acgcccagcg tggataccga ttcatccacc tgcggcagcg
    11161 aactgcgcag gtactggatc aggtggccga gcatctgttc ggcacgcgcc gggtcggtgc
    11221 gggtcagcac ctgggcattg gccagcgagt tgtagaggaa atgcggttcg acctgcgcgt
    11281 gcagcaggtt caagcgcgct accgacaatt ccttctcgac ctgggtctgt tcggcggcgg
    11341 cctgctcgtc gcggcgctgg tcggcaaccc gccggctgat cgcgcgggtg accgcttcgg
    11401 cattctcgta gttgctgccc tcgtccagtg ccagcaggtc ggcccaccaa ccggcatcgg
    11461 gctcgaacag cagggtgacg gtgctggtgc cctggcccgg ggtgaccgtg gccagcacgc
    11521 tgttgcgctt gatcgccagc cgcgccggca ggttccagcg cgacggctgg cggccgttcc
    11581 acagatcgac gcggcgcaca taggcgcgca cctgcaggct gcctgccgag ctttccacct
    11641 cttccacccg cggcagctcg cccacggccg cctcgaccac cgcgaacgca tggccggcat
    11701 ccatcggcag ttcgatctgc cggcgctggc gccccgacag ggtggcacca tcaaggcggc
    11761 cggccaccag ccagacccgc cgcacgtggg tcaccgcact gcccagcgcg gagatcatca
    11821 ggaacatcac cagcagcccg aatacccagc cggggccatc gttcatgccg ctgaaaatgc
    11881 cgctccagac catgccggcc acgaacagtg ccgcggccca ggcgagcagg tgacgaagga
    11941 tgagggagag gctggcgaac acggcggcgc cttggaggaa gggggtgagc cgagcatagg
    12001 gcggcctgcc gggcaaacaa gcgggctgcg acgaagggcc cgaaagcggg gatggaagcc
//
LOCUS       DAOKIP010000123        12056 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.123,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000123 DAOKIP010000000
VERSION     DAOKIP010000123.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 12056)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12056)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12056
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.123"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(120..1097)
                     /locus_tag="QEL58_002686"
     CDS             complement(120..1097)
                     /locus_tag="QEL58_002686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isopenicillin N synthase family oxygenase"
                     /protein_id="HDS1677140.1"
                     /translation="MRWPPRPNDKPGTAVSQIPTLDITRFDSDREAFVAELGAAYRQW
                     GFAGIRNHGIPQADIDAAYDAFKAFFALPDEVKRKYHVAGSGGARGYTPFGVETAKGS
                     KHFDLKEFWHIGREIADDSKYRDVMAPNLWPTEVEGFRERGYGLYQALDNLGSRVLSA
                     LALHIGLPEDFFADKTNFGNSILRPIHYPPITTDDIPNVRAGAHGDINFITLLVGASA
                     AGLEVQSHEGEWVPFTSDADTIVVNIGDMLQRLTNHVYPSTIHRVVNPPGELARQPRY
                     SVPFFLHPNPDFLIDVLPSCITPENPSRYPEAITAHGFLEERLREIKLK"
     gene            1249..3126
                     /locus_tag="QEL58_002687"
     CDS             1249..3126
                     /locus_tag="QEL58_002687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008267577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3413 domain-containing protein"
                     /protein_id="HDS1677141.1"
                     /translation="MPAAAPAAPAIEGSARRWRRLAWWSLFVVGNAVLAAAIALGNVP
                     LRDNPGGGAGLAYLAIALPGHLLAFGALAGLLPLLLGLWPRSARTLSISAVLLQGLWL
                     CLLLVDAKVFTLYRFHLNAMVVNMVFGGALQDQVALSWKTWLQVALLAAAVFTAEGLL
                     AWACWKLLPAAPRRRRVLQAWAVVALLMAGGQVATAYYDARGDRDVITQWNYLPWAQP
                     ITAKSFMRRLGVVSEQQVGLPDPRHAQLVYPLQPLRCQNPHRPNVLMVVLESLRHDAL
                     TPQVMPNTAALAESARVYERHFSTGNATRYGLFGLLYGLPGGYWPSMLDEQRGSQLFK
                     VLGQQGYDLHLYGSAPLYSPEFDRTAFADVREQLHQGPAGLGSEARDSHIVASLRKDI
                     RASQAAHTPWFGFVFLDSTHAPYHIPKGYPPLATPMAREIDFLKFGPDHDPTPELNRY
                     RTAVHYADSLVGTLLDDLRAQGLEQDTIVLVTGDHAEEFNDLKLNYWGHNGNFSDYQL
                     QVPFVLHWPGQASGHESRTSSHEDWVPTLMRHALGCENALTDYSTGHDLLAEPQGRRA
                     LVVESWSQRAVRDGDAIYVFDKFGNATALDLHYRPLPQQTPDAAAVRTAWEALTRFRN
                     R"
     gene            3146..4291
                     /locus_tag="QEL58_002688"
     CDS             3146..4291
                     /locus_tag="QEL58_002688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014647875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HDS1677142.1"
                     /translation="MNRPLRILHTEAAKGMGGQEIYIFRHMQVMRARGHDVSLLCQPD
                     ARLATLARDDGFTVHTLRMGGLARLLRGIWSVSRLVRRERYDVVNTTSRRDALIAAAG
                     ARLGGTPLVVRSRHLMSPVNSLLTYTRLPHRVLTVSSFVKQLLADRGIPAEHIGIVPP
                     IAVPPRWSDIHLDNPWQRLQEVRAEVRAELGFGEQDVVVGCVAVLREAKGHADLLQAM
                     VPLCKTNPHLHLVVVGDGEVVMDRLQAMRDAHGLQAQVHLLGYRDGACRLMAGFDVFA
                     LASHKEAAGTVFLEAAYVGVPIVATRVGGVPEMVVDGSNAILTRLGDNAALTGALRLL
                     VDDPERRRQMGRAGWDWMHGAHRFTPTGHGEATEHYYHQWLKELGHG"
     gene            4284..5141
                     /locus_tag="QEL58_002689"
     CDS             4284..5141
                     /locus_tag="QEL58_002689"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005417943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HDS1677143.1"
                     /translation="MADARTVPVLMHHHVSPSPGMITVSPENFESQIAWLAGNGWTSL
                     TLDQYAGFLAGRPVPRKSIVITFDDGYLDNWVYAHPILQKYGMHAVVFVVTGWMGEGP
                     ERPHAGIAGASLPATPDHRGCEVAIYEQNRSDDVMMRWSEARAAIAAGTFEVHCHTHT
                     HTRWLRRDDLDRAQRRAGLSHDLAISRDVLQEKLGEVSDTLCWPYGDFDQDHIEVARE
                     QGFRYLHTTHPFGRNVVGGDPERIYRFAIRNRPASWLRKRIAQSYNPLIAPLFNGFKA
                     RQKKMVPGP"
     gene            complement(5191..5673)
                     /locus_tag="QEL58_002690"
     CDS             complement(5191..5673)
                     /locus_tag="QEL58_002690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RcnB family protein"
                     /protein_id="HDS1677144.1"
                     /translation="MNTSLRCSRCLLAGALLVLPLLGGVSIASAERRPEGGPHMSAPR
                     EEPMRAPWGYPRMERPRELGNARPAFREEYRHNFRADHAFRIGPYHPPVGYAYQRWHY
                     GQFLPRPYWIGDYILNDFWLFGLDMPPMGYEWVRYGPDALLINTGNGEIVQAVYGRFF
                     "
     gene            complement(5935..7296)
                     /gene="glmM"
                     /locus_tag="QEL58_002691"
     CDS             complement(5935..7296)
                     /gene="glmM"
                     /locus_tag="QEL58_002691"
                     /EC_number="5.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucosamine mutase"
                     /protein_id="HDS1677145.1"
                     /translation="MGGRKYFGTDGIRGRVGQGVISADFVLRLGNALGRVLVAQRGQD
                     GRRPIVLIGKDTRISGYMFEAALEAGLVAAGADVQLLGPMPTPAVAFLTRTLGVDAGI
                     VISASHNPHYDNGIKFFSAQGEKLDDATELALEAALDVPFATAESEKLGKASRAREAV
                     GRYIEFCKASVPRAFDLRGLRLVLDCAHGATYQIAPLLFRELGAEVIGIGAEPNGINI
                     NAGVGSTHIDNLAAKVRETRADLGIAFDGDGDRVLMADDQGNPVDGDDLLYILARAWK
                     AEGRLHGPVVGTLMSNYGVEKAFADLQIPFERSNVGDRYVHQALIEGGGVLGGEASGH
                     LLCLDRATTGDGIISALQVLVALRSSGQTLRQALKGLVRVPQKTVNVRLGNVSAKATV
                     QADRVQAALAVAQQSVAGRGRAFLRPSGTEPVVRVTVEADDAALMQETLDRLSAAVRE
                     AAA"
     gene            complement(7296..8171)
                     /locus_tag="QEL58_002692"
     CDS             complement(7296..8171)
                     /locus_tag="QEL58_002692"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006381208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyltransferase
                     subunit beta"
                     /protein_id="HDS1677146.1"
                     /translation="MSWLSKLMPSGIRTDNTPSKKRSVPEGLWEKCSNCGSALYRPEL
                     EENLEVCPKCGHHMAIRARARLAALFDADSTTEIGARLGPTDLLKFKDQKKYSERIKI
                     AQKNTGEYDALIAMRGLLKGRALVASSFDFAFMGGSMGSVVGERFALAAETAVEIGAP
                     YVCFSQSGGARMQEGLFSLMQMAKTSAALGKLREAGLPYISVLTHPTTGGVSASFAML
                     GDINIAEPQALIGFAGPRVIEQTVREKLPEGFQRSEFLLEHGAIDQICDRREMRDRLS
                     DLLAMLGRQPAPEVA"
     gene            complement(8368..9177)
                     /locus_tag="QEL58_002693"
     CDS             complement(8368..9177)
                     /locus_tag="QEL58_002693"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005417949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit alpha"
                     /protein_id="HDS1677147.1"
                     /translation="MPVSRLDACFQRLREQQRKALIPFITAGDPSLEATVPVMHALVE
                     AGADVIELGVPFSDPMADGPTIQRSSERALARGAGSRYVLQAVAQFRERDAQTPVVLM
                     GYLNPVEIHGYAAFADAAVKAGVDGVLLVDLPPEEAGDAQQAFEAAGLALVLLASPTT
                     SEARADKLLALARGYLYYVSFAGVTGASERLDSDAASARLQALRKRASVPVVAGFGIK
                     DAASAAAMARQADGVVVGSALVAVLAEAGSAEDAAQRAAAFLAPLRQALDA"
     gene            complement(9179..9868)
                     /locus_tag="QEL58_002694"
     CDS             complement(9179..9868)
                     /locus_tag="QEL58_002694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677148.1"
                     /translation="MNCMLRHGGAWVLAVGLGGCAPPDPPVLAPAPASPAAIATARQV
                     ASNDDAAAHRPIEDAPLPGADDAADDDSAPAVVSVALDHAGEVLIGQPFSELQSEGQW
                     HSAGLSEATSGRCEYYERGTLPEGVAMMVQDGDVVRFDLAPIDDSGQVVVQPGPFGLH
                     LDMPRAQALQLLPKGVSAQPYGKDVEAGETLLWQDPGSDLAIRVEIVDGTVSRMYWGA
                     SGAVDLIEGCT"
     gene            complement(9865..11082)
                     /gene="trpB"
                     /locus_tag="QEL58_002695"
     CDS             complement(9865..11082)
                     /gene="trpB"
                     /locus_tag="QEL58_002695"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012511719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit beta"
                     /protein_id="HDS1677149.1"
                     /translation="MSASPIADYHAFPDAQGHFGRYGGSFVAETLVGPLQELAQAYDQ
                     ARQDPAFQAAYDRDLAHYVGRPSPIYHAKRLSDHVGGAQILLKREDLNHTGAHKINNT
                     IGQALLAARMGKKRIIAETGAGQHGVASATVAARLGLECVVYMGATDIERQKINVYRM
                     KLLGATVVPVTSGSATLKDALNEAMRDWVTNVQDTFYIIGTVAGPDPYPRMVRDFNAI
                     VGREAREQMLAEYGRLPDAITACVGGGSNAIGLFHAFLNDRQVEIVGAEAAGDGISTG
                     RHAASIAAGRPGVLHGNRTYVLCDDDGQIIETHSVSAGLDYPGVGPEHAFLADTGRAR
                     YLGITDEEALQAFHLLAHTEGILPALESSHALAQAIKLARERPRDQIVLCNLSGRGDK
                     DVHTIAAREGLVL"
     gene            11180..>12056
                     /locus_tag="QEL58_002696"
     CDS             11180..>12056
                     /locus_tag="QEL58_002696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDS1677150.1"
                     /translation="MGSSSLPPLNALRAFEATARLGGVGRAAQDLHVTHGAVSRQLKL
                     LEDHLGMALFQRAGRGLRLTAAGSRLQVACSEAFTGIEDCVRELRRPTASPALVLGCS
                     GSVLARWMIPRLPALQAALPGVRLQWSALDGSFTEAQAALDAVLLLAQGPWPRGWQVR
                     ELAPERVGVVVAPSHPAAQRLRHVPPSALLQETLLHTSSRPQAWPAWAQAHGLDASKL
                     PLGTAFEHLYYLLEAAVAGLGPAIAPEPLVAEDLAAGRLIAPWGFSATGGFWVLARPD
                     GPADPRVDALAEWAMA"
BASE COUNT         1918 a         4141 c         4062 g         1935 t
ORIGIN      
        1 acctccccgc ctccccgcgg aacatcccag agccgctttg gctttggctt tggcctctgc
       61 gggtgcaggg cgcagccctg caaagaaaaa ggccgccttt cggcggcctt cacttcttgt
      121 tacttcagct tgatctcgcg caggcgttcc tcgaggaagc cgtgggcggt gattgcctcc
      181 gggtagcgac tcgggttctc cggggtgatg cacgagggca gcacgtcgat caggaagtcc
      241 gggttcgggt gcaggaagaa cggcaccgag tagcgcggct ggcgcgccag ctcacccggg
      301 ggattgacca cgcggtggat ggtcgacgga tacacgtggt tggtcaggcg ctgcagcatg
      361 tcgccgatgt tgaccacgat ggtgtccgcg tctgacgtaa acggcaccca ctcgccctcg
      421 tgcgactgca cttccaggcc ggcggcgctg gcgcccacca gcagggtgat gaagttgatg
      481 tcgccatggg caccggcgcg tacgttcgga atgtcgtcgg tggtgatcgg cgggtaatgg
      541 atcggacgca ggatcgagtt gccgaagttg gtcttgtcgg cgaagaagtc ttccggcagc
      601 ccgatgtgca gggccagcgc cgacagcacg cgcgaaccca ggttatccag cgcctgatac
      661 agaccgtaac cgcgctcacg gaagccctcg acctcggtcg gccacaggtt cggcgccatc
      721 acgtcgcggt acttggagtc gtcggcgatt tcacggccga tgtgccagaa ctccttcagg
      781 tcgaaatgct tggagccctt ggcggtctcc acaccgaacg gggtgtagcc gcgggcgccg
      841 ccgctgccgg ccacgtggta cttgcgcttg acctcgtccg gcagggcgaa gaaggccttg
      901 aaggcatcgt aggccgcatc gatgtcggcc tgcgggatgc catggttgcg gatgcccgcg
      961 aatccccatt ggcggtaggc cgcgcccagc tcggccacga aggcctcgcg gtcgctgtcg
     1021 aaacgggtga tgtcgagggt ggggatctgg ctcacagcgg ttcctggctt gtcgttgggt
     1081 ctggggggcc agcgcattca tggcccgcct gaacattgtg acagatcgcc cgggcgacgc
     1141 cactcgatac gaagaaacaa accgatacaa tgcgcgaccc gcgcgcggag caacgcgtcc
     1201 gtcacgtggg ccccgcccct ttcccgcgct ccctgaacct gtcccgccat gcccgcagct
     1261 gcccctgccg cccccgccat agaaggttcc gcccggcgct ggcgccggct ggcgtggtgg
     1321 tcgctgttcg tcgtcggcaa tgccgtgctg gccgccgcga tcgcgctggg caatgtaccg
     1381 ctgcgtgaca atccgggcgg cggcgccggt ctggcctatc tggcgatcgc cctgcccggc
     1441 cacctgctcg ccttcggcgc gctggccggc ctgctgccgt tgctgctggg cctgtggccg
     1501 cgcagtgcgc gtacgctgag catcagcgcc gtactgctgc agggcctgtg gctgtgcctg
     1561 ctgctggtcg acgccaaggt cttcaccctg taccgcttcc acctcaatgc catggtcgtg
     1621 aacatggtgt tcggcggcgc cctgcaggac caggtggccc tgtcctggaa gacctggctg
     1681 caggtcgcgc tgctggctgc cgcggtgttc accgccgagg gcctgctggc ctgggcgtgc
     1741 tggaagctgc tgccggccgc gccgcgccgg cgccgggtgc tgcaggcctg ggcggtggtg
     1801 gcactgctga tggcgggcgg ccaggtcgcc accgcctatt acgacgcccg cggcgaccgc
     1861 gatgtgatca cgcagtggaa ctacctgccg tgggcgcagc cgatcaccgc caagagtttc
     1921 atgcgcaggc tgggcgtggt cagcgaacag caggtgggcc tgcctgatcc gcgccatgcc
     1981 cagcttgtct atccgctgca gccgctgcgc tgccagaacc cgcaccggcc caacgtgctc
     2041 atggtggtgc tggaatcgct gcgccacgac gctctcaccc cgcaggtcat gccgaacacg
     2101 gcggcactgg ccgagtccgc gcgcgtatac gagcgtcact tcagcaccgg caacgccacc
     2161 cgctatggac tgttcgggct gctgtacggc cttccggggg gctattggcc aagcatgctg
     2221 gatgagcagc gcggttcaca gctgttcaag gtgcttggcc aacagggcta cgacctgcac
     2281 ctgtacggca gcgcgccgct gtacagccct gaattcgacc gcaccgcctt cgccgacgtt
     2341 cgcgagcagc tgcaccaggg gccggcgggg ctggggtcgg aagcgcgcga cagccacatc
     2401 gtggcctcgc tgcggaagga catccgcgcc agccaggccg cgcatacgcc gtggttcggc
     2461 ttcgtcttcc ttgattcgac ccatgccccg taccacatcc ccaagggcta tccgccgctg
     2521 gccaccccga tggcacggga aatcgacttc ctgaaattcg gccctgacca cgacccgacc
     2581 cccgagttga accgctaccg gactgccgtg cactacgctg acagcctggt tggcacgctg
     2641 ctggacgatc tgcgcgcaca gggcctggag caggacacca tcgtgctggt caccggtgac
     2701 cacgccgagg aattcaacga cctcaagctg aattactggg gtcacaacgg caacttctcc
     2761 gactaccagc tgcaggtgcc cttcgtgctg cattggccgg gccaggccag cggccatgaa
     2821 tcgcgcacca gttcgcacga ggactgggtg ccgaccctga tgcgccatgc actgggctgc
     2881 gagaacgcat tgaccgatta cagcaccggc cacgacctgc tggccgaacc gcagggcagg
     2941 cgcgcgctgg tggtcgaaag ctggtcgcag cgcgcggtgc gcgatggcga tgccatctac
     3001 gtgttcgaca agttcggcaa cgcaaccgcg ttggacctgc attaccgccc gctgccacag
     3061 cagacccccg atgcggccgc tgtccgcact gcatgggaag cgctgacccg cttccgcaac
     3121 cgctgagcct caaggaccga accgcatgaa ccgtccgctg cgcatcctgc acaccgaagc
     3181 cgccaaaggc atgggtgggc aggagatcta catcttccgc cacatgcagg tgatgcgggc
     3241 gcgcggccat gacgtatcgc tgttgtgcca gcccgatgct cgcctggcca ccctggcacg
     3301 cgatgatggt ttcaccgtgc acaccctgcg catgggcggc ctggcccggc tgctgcgcgg
     3361 catctggtcg gtgtcgcggc tggtgcgccg cgaacgttac gacgtggtca acacgaccag
     3421 ccgccgcgat gcgctgattg ccgccgccgg tgcacgactg ggaggaactc cactggtggt
     3481 gcgctcgcgc cacctgatga gcccggtcaa ttcactgctg acctataccc ggctcccgca
     3541 ccgggtgctg accgtgagca gcttcgtcaa gcagctgctg gccgaccgcg gcattccagc
     3601 cgagcacatc ggcatcgtgc cgccgatcgc ggtgccgccg cgctggagcg acatccacct
     3661 ggacaacccg tggcagcgac tgcaggaagt ccgcgccgaa gtccgcgccg aactgggctt
     3721 cggcgaacag gacgtggtgg tggggtgcgt ggcggtgctc cgcgaggcca agggccatgc
     3781 cgatctgctg caggcgatgg tgccgctgtg caagaccaac ccccacctgc acctggtggt
     3841 ggtgggcgac ggcgaggtgg tgatggatcg actgcaggcg atgcgcgacg cgcatgggct
     3901 gcaggcgcag gtgcatctgc tcggctaccg cgatggtgcc tgccgactga tggccgggtt
     3961 cgacgtcttc gcgctggcct cgcacaagga ggccgccggt accgtgttcc tggaagcggc
     4021 ctatgtcggc gtgccgatcg tggccacccg cgtcggtggc gtaccggaga tggtggtcga
     4081 cggcagcaat gcgatcctca cccggctggg cgacaatgca gccctgaccg gcgccctgcg
     4141 cctgctggtg gacgatcccg aacggcgacg gcagatgggc cgcgccggct gggactggat
     4201 gcacggcgca caccgtttca ccccgactgg ccatggcgag gccaccgaac actattacca
     4261 ccagtggctg aaggagctgg gacatggctg acgcgcgaac tgttccggtg ctgatgcacc
     4321 accacgtgag tccatcgccg ggcatgatca ccgtgtcacc ggagaatttc gaaagccaga
     4381 tcgcctggct cgccggcaac ggctggacct cgctgacgct ggaccagtac gccggcttcc
     4441 tggccggcag gccggtgcca cgcaagtcga tcgtgatcac cttcgacgat ggctacctgg
     4501 acaactgggt ctacgcacac ccgatcctgc agaagtacgg catgcacgcc gtggtgttcg
     4561 tggtcaccgg ctggatgggt gaaggcccgg agcggccgca cgccggcatc gccggagcgt
     4621 cgctgcccgc caccccggac caccgcggct gcgaagtggc gatctacgaa cagaaccgca
     4681 gcgatgatgt gatgatgcgc tggagcgaag cacgtgcggc catcgccgcc ggcaccttcg
     4741 aagtgcactg ccacacccac acccacaccc gttggctgcg ccgcgacgac ctggaccgtg
     4801 cacagcgccg cgccggcctg agccacgacc tggcgatctc gcgcgacgtg ctgcaggaaa
     4861 agctgggcga agtgtccgac acgctgtgct ggccgtatgg cgacttcgac caggaccaca
     4921 ttgaagtggc acgcgagcag ggtttccgtt acctgcacac cacccacccg ttcggccgca
     4981 acgtggtggg cggcgatccg gaacgcatct accggtttgc gatccgcaac cgcccggcca
     5041 gctggctgcg caagcgcatc gcgcagagct acaacccgct gatcgcaccg ctgttcaatg
     5101 gcttcaaggc gcgccagaag aagatggtgc cggggccctg agcgcaaggg cctcccccgc
     5161 ccgctgcggc gcgggagacc cgcgtcggcc tcagaagaag cggccgtata cggcttgcac
     5221 gatctcgccg ttgccggtgt tgatcagcag cgcatccggc ccgtagcgca cccattcgta
     5281 gcccatcggc ggcatgtcca ggccgaacag ccagaagtcg ttgaggatgt agtcgccgat
     5341 ccagtacggg cgcggcagga actggccgta gtgccagcgc tggtacgcat agcccaccgg
     5401 cggatggtag ggcccgatgc ggaacgcatg gtcggcgcgg aagttgtgcc ggtactcctc
     5461 gcggaatgcc ggccgtgcat tacccagctc gcgcgggcgc tccatccttg ggtagcccca
     5521 cggcgcgcgc atcggctcct cgcgcggagc ggacatatgc ggcccacctt cgggacgacg
     5581 ttcggcgctg gcaatggaga cgccacccag caacggcagc accagcagcg cacctgccag
     5641 caggcagcgg ctgcagcgca atgaagtgtt catggtcatg gtccttgcaa caacagtgaa
     5701 aggatggagc acgaacggct ccgaccgggt cccggcctgc gtagcgcctg catgcatgca
     5761 ggcaagagat cctgatcccg ggaatacgcc gcgtatcgtt cacgcgatgt cacaaagcgc
     5821 acagccgcag ctgaacgtgg tcgccggtcg tgatcggttc agtcaccctc gctggaaaac
     5881 aacatggccg caaaagcggc catgtcgtgg catcacgttg tacggtcgcc ggcttcaggc
     5941 agcggcttca cggaccgccg cggacaggcg gtccagcgtt tcctgcatca gtgctgcgtc
     6001 atcggcttcc accgtgaccc gcaccaccgg ctcggtaccg gacgggcgca ggaacgcacg
     6061 gccacgacca gccaccgact gctgcgcgac ggccagcgcg gcctgcacgc ggtcggcctg
     6121 caccgtggcc ttggccgaga cattgcccag ccgcacgttg accgtcttct gcggtacccg
     6181 caccagcccc ttcagcgcct ggcgcagggt ctgcccgctg ctgcgcagcg ccaccagtac
     6241 ctgcagggcg ctgatgatgc catcgccagt ggttgcccgg tccaggcaca gcaggtggcc
     6301 ggaggcttca ccacccagca cgccaccgcc ttcaatcagc gcctggtgca cgtaacggtc
     6361 accgacgttg ctgcgctcga acggaatctg caggtcggcg aaggccttct ccacgccgta
     6421 gttgctcatc agcgtgccga ccaccgggcc atgcaggcga ccttcggcct tccacgcgcg
     6481 cgccaggatg tacagcaggt catcgccgtc aaccggattg ccctggtcgt cggccatcag
     6541 cacgcggtca ccgtcaccat cgaaggcgat gccgagatcg gcgcgggtct cgcggacctt
     6601 ggccgccagg ttgtcgatat gggtggagcc gacccctgcg ttgatgttga tgccgttggg
     6661 ttcggcgccg atgccgatca cctcggcccc cagctcacgg aacaacagcg gtgcgatctg
     6721 gtaggtggcg ccgtgcgcgc aatccagcac caggcgcagc ccgcgcaggt cgaaggcgcg
     6781 cggcacgctg gccttgcaga attcgatgta gcggccgacc gcctcgcgtg cgcgcgacgc
     6841 cttgcccagc ttttccgatt cggcagtggc gaacggaaca tccagtgccg cttcaagcgc
     6901 cagttcggtg gcatcgtcga gcttctcgcc ctgggcggag aagaacttga tgccgttgtc
     6961 gtagtgcgga ttgtgcgaag cactgatgac gatgccggcg tccacgccca gggtacgcgt
     7021 caggaacgcg accgccggag tcggcatcgg gccgagcagc tgcacgtcgg cgccggcggc
     7081 gaccagcccg gcttccagtg ccgcttcgaa catgtagccg gaaatgcggg tgtccttgcc
     7141 gatcagcacg atcggccggc gcccgtcctg gccgcgctgg gcgaccagca cgcgccccag
     7201 ggcattgccc aggcgcagca cgaagtccgc cgagatcacg ccctggccga cccgcccacg
     7261 gatgccgtca gtaccgaagt acttgcggcc tcccatcaag ccacctccgg cgccggctgg
     7321 cggcccagca tcgccagcag gtcggacagg cggtcgcgca tttcgcggcg gtcgcagatc
     7381 tggtcgatgg caccatgctc cagcaggaac tccgaacgct ggaaaccctc cggaagcttc
     7441 tcacgcacgg tctgctcgat cacgcgcggg ccggcaaagc cgatcagcgc ctgcggctcg
     7501 gcgatgttga tgtcgcccag catcgcgaac gacgccgaca cgccaccggt ggtcggatgg
     7561 gtcagcaccg agatgtacgg caggccggct tcacgcagct tgcccagcgc ggccgaggtc
     7621 ttggccatct gcatcagcga gaacaggcct tcctgcatgc gtgcaccgcc gctctgcgag
     7681 aagcacacgt aaggggcgcc gatctcgact gcggtttcgg cagccagcgc gaagcgctca
     7741 ccgaccaccg agcccatcga gccgcccatg aaggcgaagt cgaacgacga agccaccagc
     7801 gcacgcccct tgagcaggcc gcgcatggcg atcagcgcgt cgtactcgcc ggtgttcttc
     7861 tgcgcgatct tgatgcgctc gctgtacttc ttctggtcct tgaacttgag caggtcggtc
     7921 ggccccaggc gcgcaccgat ctcggtggtg ctgtcagcgt cgaacagcgc cgccagccgc
     7981 gcgcgcgcgc ggatcgccat gtgatggccg cacttcgggc agacctccag gttctcttcc
     8041 agctcaggac ggtacaacgc gctgccgcag ttgctgcact tttcccacag gccctcgggg
     8101 acgctgcgct tcttgctggg ggtgttgtcg gtgcggatgc cggacggcat caacttgctg
     8161 agccaactca tgcgggagga cacttccgtt cagggcggcc cgggggccgc aaaggcggac
     8221 agtctagctc cgctgccccc gcccgtgcac cccttgcggt gcccgggcca gctggaaaaa
     8281 accatgctgg gacgtacgtt taggtccggg tcgcgcccgc cgctggccgg cagcccggag
     8341 gatgccggcc cgtggccggc acgaccgtca cgcgtccagc gcctgccgca acggtgcgag
     8401 gaaggctgcg gcgcgctgcg cggcgtcttc cgccgagccc gcctctgcca gcaccgccac
     8461 cagtgcgctg cctaccacca cgccgtcggc ctgccgcgcc attgccgcgg cactggccgc
     8521 gtccttgatg ccgaagcccg ccacgaccgg caccgaggca cgcttgcgca gtgcctgcag
     8581 gcgggcgctg gcagcatcgc tgtccagccg ctcggacgca ccggtgacac cggcaaagct
     8641 gacgtagtac aggtagccac gcgccagggc cagcagcttg tcggcacgcg cttcactggt
     8701 ggtcggcgac gccagcagga ccaacgccag gccagcggcc tcgaacgcct gctgtgcatc
     8761 accggcttct tccggcggca gatcgaccag cagcacgccg tccacgccgg ccttcactgc
     8821 ggcgtcggcg aacgctgcgt agccatggat ctcgaccgga ttcaggtagc ccatcagcac
     8881 caccggggtc tgcgcatcac gctcccggaa ctgcgccacg gcctgcagca cgtaacggct
     8941 gccggcaccg cgcgccagcg cgcgctcgga gctgcgctgg atggtgggtc cgtccgccat
     9001 cgggtcggag aacggaacgc ccagttcgat cacatcggcg ccggcctcga ccagtgcgtg
     9061 catgaccggc acggtagcct ccagcgaggg atcgccggca gtgatgaagg ggatcaacgc
     9121 cttgcgctgc tgctcgcgca ggcgctggaa acaggcatca agtcgggata cgggcatgtc
     9181 aggtacatcc ttcgatcagg tcaacggcgc cgctggcgcc ccagtacatt cgggatacgg
     9241 tgccgtcgac gatctccacg cggatcgcca ggtcggaacc ggggtcctgc cagagcaggg
     9301 tctcgccggc ctccacatcc ttgccataag gctgggcgga gacgcccttg ggcagcagct
     9361 gcagggcctg cgcgcgcggc atgtccaggt gcaggccgaa cggccccggc tggaccacca
     9421 cctggcccga atcgtcgatg ggggccaggt cgaaacgcac cacgtcaccg tcctgcacca
     9481 tcatcgccac gccttcaggc agcgtgccgc gctcgtaata ctcacagcgc ccggaggtcg
     9541 cctcgctcag cccggccgag tgccactgcc cctcgctctg cagttcactg aaaggttggc
     9601 cgatcagcac ctcgccggca tggtccagtg ccaccgaaac caccgccgga gcactgtcgt
     9661 catcggcagc atcgtctgcg cctggcaacg gtgcgtcttc gatcggacga tgtgctgcag
     9721 catcgtcgtt gctggcaacc tggcgtgccg tggcgatcgc cgccggggac gccggcgccg
     9781 gcgccagcac cggcggatcg ggcggcgcgc aaccccccag gccgaccgcc agcacccacg
     9841 ccccaccatg gcgcagcatg caattcacag caccaggcct tcgcgcgcgg cgatggtatg
     9901 cacgtccttg tcgccgcggc cggacaggtt gcacagcacg atctggtcgc gcggacgctc
     9961 gcgcgccagc ttgatcgcct gcgccagcgc gtggctggat tccagtgcgg gcaggatgcc
    10021 ctcggtgtgc gccagcaggt ggaacgcctg cagggcctct tcatcggtga tgccgaggta
    10081 gcgcgcgcgg ccggtatcgg ccaggaacgc atgctccggg ccgacgcccg gataatccag
    10141 gccagccgac accgaatggg tctcgatgat ctggccgtcg tcgtcgcaca gcacgtaggt
    10201 gcggttgcca tgcagcacgc ccgggcgacc ggcggcgatc gacgcggcat ggcgaccggt
    10261 gctgatgcca tcacctgccg cttcggcgcc gacgatctcg acctggcggt cgttgaggaa
    10321 ggcatggaac aggccgatgg cgttgctgcc gccgccgacg caggcggtga tcgcatcggg
    10381 caggcggccg tactcggcca gcatctgttc gcgtgcctcg cgcccgacga tggcgttgaa
    10441 atcgcgcacc atgcgcgggt acgggtccgg accggcgacg gtgccgatga tgtagaaggt
    10501 gtcctgcacg ttggtcaccc agtcgcgcat cgcttcgttg agcgcatcct tcagggtggc
    10561 cgagccggag gtgaccggca ccaccgtcgc gccgagcagc ttcatgcggt agacgttgat
    10621 cttctgccgc tcgatgtcgg tggcgcccat gtacaccacg cattccaggc ccaggcgcgc
    10681 ggcgacggta gcgctggcca cgccatgctg gccggcgccg gtctcggcga tgatgcgctt
    10741 cttgcccatc cgcgcggcca gcagggcctg gccgatggtg ttgttgatct tgtgcgcgcc
    10801 ggtgtggttc aggtcctcgc gcttgagcag gatctgcgcg ccaccgacat ggtcgctcag
    10861 gcgcttggcg tggtagatcg ggctcggccg gcccacgtaa tgggccaggt cgcggtcgta
    10921 ggccgcctgg aatgccgggt cctggcgggc ctggtcatag gcctgggcca gttcctgcag
    10981 cgggccgacc agggtttcgg cgacgaaact gccgccgtag cggccgaagt ggccctgggc
    11041 atccgggaag gcgtgatagt cggcgatggg ggaggcagac atggagacga ccggtggttc
    11101 aagacaggtg gatactctag cgcacgggtc gtgaccggaa aatggatatt atctggcgta
    11161 tcttgtcagg aaatctcaca tgggcagctc atcgcttccg ccgctcaatg cgctgcgcgc
    11221 gttcgaggcc accgcccgcc tgggcggggt cggccgcgcc gcacaggacc tgcatgtcac
    11281 ccacggtgcg gtcagccggc agctgaagct gctggaggat catctgggca tggccttgtt
    11341 ccagcgtgcc ggtcgcggcc tgcgcctgac cgccgcaggc agccgcctgc aggtggcatg
    11401 cagcgaggcg ttcaccggca ttgaagactg cgtgcgtgaa ctgcggcggc caacggcatc
    11461 tcctgctctg gtactgggct gcagtggcag cgtgctggcg cgctggatga tcccgcgact
    11521 gcccgcgctg caggccgccc tgcccggcgt tcgcctgcag tggtcggcac tggacggcag
    11581 cttcaccgag gcccaggcag cgctggatgc ggtcctgctg ctggcgcagg ggccgtggcc
    11641 gcgcggctgg caggtgcgcg aactggcgcc ggaacgggtc ggcgtggtgg tggccccctc
    11701 ccacccggcg gcgcaacgcc tgcggcatgt cccgccctcg gcactgctgc aggaaacgct
    11761 gctgcacacc agctcacgac cgcaggcgtg gccggcttgg gcgcaggcac atggcctgga
    11821 cgcatcgaag ctcccgttgg gcaccgcctt cgagcatctg tattacctgc tggaggcagc
    11881 ggtagccggg ctgggcccgg caatcgcgcc cgagccgctg gtggccgaag acctggccgc
    11941 cgggcgcctg atcgcgccct ggggattctc ggcgacaggc gggttctggg tgctggcgcg
    12001 gccggacggc ccggccgacc cgcgcgtgga tgcactggcc gagtgggcga tggcgc
//
LOCUS       DAOKIP010000124        12011 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.124,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000124 DAOKIP010000000
VERSION     DAOKIP010000124.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 12011)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12011)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12011
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.124"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(78..839)
                     /gene="ubiE"
                     /locus_tag="QEL58_002697"
     CDS             complement(78..839)
                     /gene="ubiE"
                     /locus_tag="QEL58_002697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019303204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional demethylmenaquinone
                     methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol
                     methylase UbiE"
                     /protein_id="HDS1677151.1"
                     /translation="MSESPYKAGTTHFGFRDVAAKDKQKLVGQVFTSVARNYDLMNDL
                     MSLGVHRAWKRYYVATAQVKPGDRVLDLAGGTGDIAALLKERVGAEGSVVLGDINAGM
                     LSVGRDRLTNRGLVLGLDYVQCNAEALPFPDNSFDLVTIAFGLRNVTDKDAGLREMYR
                     VLKVGGQARVLEFSEVTADWFKPIYDFHSFRILPKLGKLFANDSDSYQYLAESIRKHP
                     PQDELKAMMGQAGFERCHYKNLTGGIVSIHSGYKL"
     gene            920..1372
                     /locus_tag="QEL58_002698"
     CDS             920..1372
                     /locus_tag="QEL58_002698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011346314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside deaminase"
                     /protein_id="HDS1677152.1"
                     /translation="MITTPDYQALLQTAIAEARQGLAEGGVPIGAALYHNDGRLLGCG
                     HNRRVQEGDPSVHGETDAFRKAGRQRRYQDTIMVTTLAPCWYCSGLVRQFNIGTVVVG
                     ESRTFQGGIDWLRENGVNVIDLDSQECVDLLGSFIAQHPEIWNEDIGE"
     gene            1571..1831
                     /locus_tag="QEL58_002699"
     CDS             1571..1831
                     /locus_tag="QEL58_002699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677153.1"
                     /translation="MCAHAVRPTPDPILAAIRTRLQQQFALHQRGALFWTAYQGLQLE
                     LVQGRPLDHERLCNAMADMAEEMGAVEHAQLIGNRNAGCTSP"
     gene            1906..2232
                     /locus_tag="QEL58_002700"
     CDS             1906..2232
                     /locus_tag="QEL58_002700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014038526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677154.1"
                     /translation="MHAEVPTIPPVINVDAELDHWRRQHADGALPHNSFGSYVPWIKF
                     ACDSLITQPRASNAQRDEMFQTQYALQIMPRLSEAQAREFVDRCWQHVYQTSRVRLQD
                     APRLRA"
     gene            2295..2717
                     /locus_tag="QEL58_002701"
     CDS             2295..2717
                     /locus_tag="QEL58_002701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012512139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low affinity iron permease family protein"
                     /protein_id="HDS1677155.1"
                     /translation="MKARNLFNTIAKKAAAATGSPWTFLAAVAIVVIWGISGPLFGFN
                     DTWQLVINTGTTIITFLMVFLIQHTQNSDTAAMQIKLDELIRATAEANNELLDLEELD
                     EERLEEIRREYERMAREAGDALARVRACHATRRDDEAV"
     gene            complement(2861..4246)
                     /gene="smeF"
                     /locus_tag="QEL58_002702"
     CDS             complement(2861..4246)
                     /gene="smeF"
                     /locus_tag="QEL58_002702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014648456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter outer membrane
                     subunit SmeF"
                     /protein_id="HDS1677156.1"
                     /translation="MKSASLFLSIAAALALASCSTLVPKDTAVAPAIPAQWPAEATQG
                     QVADVAAVGWRDFFTDARLQQVIDQSLQNNRDLRVAVLNVERARGQYRVQRADRVPGV
                     AVTGQMQRQGTDAGVTEQFTAGVGVAEFELDLFGRVRNLSEAALQQYFAVAANRRNAQ
                     LSLVAETATAWLTYGADAQRLKIADATLKTYEDSLRLAEARHERGGSSALELTQTRTL
                     VETARTDAARLRGQLAQDRNALALLAGGQLDPSLLPDSIEPQLLALAPPPAGLPSDVL
                     LQRPDIMAAEHQLLAANANIGAARAAFFPSISLTGSIGSGSSELSNLFDSGTRVWSFL
                     PKITLPIFQGGKLRANLAIANADRDIALAQYEKSIQVGFRETADALALNVSLDEQVSA
                     QQRLVDAAEQANRLSQARYDAGLDSFVTLLDARRTAYNAQQTQLQAQLAQQANRITLY
                     KVLGGGWHERG"
     gene            complement(4318..7440)
                     /gene="smeE"
                     /locus_tag="QEL58_002703"
     CDS             complement(4318..7440)
                     /gene="smeE"
                     /locus_tag="QEL58_002703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_115442840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit SmeE"
                     /protein_id="HDS1677157.1"
                     /translation="MARFFIDRPIFAWVIAIIIMLAGGLALFKLPVSMYPNVAPPAVE
                     ISATYPGASAKVVEDSVTQIIEQNMKGLDGLIYFSSNSSSNGQATITLTFESGTNPDI
                     AQVQVQNKLQLAMPLLPQEVQRQGINVAKSSSGFLNVIAFVSENGSMDANDIADYVGS
                     NVVDRLSRVPGVGNIQVFGGKYAMRIWLDPNKLHTYGLSVAEVTAAVKAQNAQVAIGQ
                     LGGAPSVKGQQLNATINAQSRLQTPEQFRNIIVRGAQDGAELRLGDVARVELGAESYD
                     FVTRYNGQPASGLAVTLATGANALDTAAGVDAALQDMKSFFPAGLKAEIPYDTTPFVR
                     VSIKGVVQTLIEAIVLVFVVMYLFLQNFRATLIPTIAVPVVLLGTFGVLAMLGFSVNM
                     LTMFAMVLAIGLLVDDAIVVVENVERIMSEEGLSPLEATRKSMGQITGALVGIGLVLS
                     AVFVPMAFMSGSTGVIYRQFSATIVSAMALSVLVAIVLTPALCATMLKPLKKGEHHVA
                     HKGWSGRFFNGFNRGFDRTSESYQRGVRGIIHRPWRFMGIVAALFVLMGVLFVRLPSS
                     FLPNEDQGVLMALVQAPVGATQERTLESITALENHFLQNEKDAVESVFSVQGFSFAGM
                     GQNAGMAFVKLKDWSERDADTGVMPITGRAMAALGQIKDAFIFAFPPPAIPELGTASG
                     YTFFLKDNSGQGHEALVAARNQLLGLAAGSKKLANVRPNGQEDTPQFRIDIDAAKATS
                     LGLSIDQINGTLAAAWGSSYIDDFVDRGRVKRVFVQADQPFRMVPEDFDLWSVKNDKG
                     EMVPFSAFASKHWDYGSPRLERYNGVSAMEIQGEPAPGVASGDAMAEIEQLAKQLPAG
                     FGIEWTAMSYQERQAGSQTPLLYTLSLMIVFLCLAAMYESWSVPTAVLLAAPLGILGA
                     VLANTFKGLERDIYFQVAMLTTVGLTSKNAILIVEFAKENLEKGASLIESIMHAVRDR
                     LRPIVMTSLAFGMGVVPLAISTGAGSGAKQAIGTGVLGGMIVGTVLGVFFVPLFFVVV
                     QRVFKRKSST"
     gene            complement(7453..8637)
                     /gene="smeD"
                     /locus_tag="QEL58_002704"
     CDS             complement(7453..8637)
                     /gene="smeD"
                     /locus_tag="QEL58_002704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014648458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter periplasmic
                     adaptor subunit SmeD"
                     /protein_id="HDS1677158.1"
                     /translation="MLLSRIRPFALSLAIAATVAACGGQPQAPEQGPGDVTVVTLKSE
                     TVGLTRELPGRTNAFLVAEVRPQVNGIVAKRLFTEGGMVKAGEPLYQLDDASYRAQAN
                     NARAQLARAEATANAARLSAKRITELAKVDAVSQQDLENAVAAQKQAEADVGAAKASL
                     DAANVTLGYARITAPISGRIGKSSVTQGALVSAGQANALATVQQLDPIYVDLTQSSAE
                     LLQLRRELAAGRLQDNQTLPVSILMEDGSTFEHKGTLEFSEVSVDPATGSFGLRVKVD
                     NPDGLLMPGMYVRAVIGGGVRSDAVLVPMQGIARDPKGDTTAMVVDKDNKVEVRPVKV
                     SRTVGDKWLVDDGLKAGDKVIVEGLQKIGPGMPVKATEKGAAPAKPAAAAQPAAPAGD
                     AK"
     gene            8848..9507
                     /gene="smeT"
                     /locus_tag="QEL58_002705"
     CDS             8848..9507
                     /gene="smeT"
                     /locus_tag="QEL58_002705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_115444191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux transporter SmeDEF transcriptional
                     repressor SmeT"
                     /protein_id="HDS1677159.1"
                     /translation="MARKTKEDTQATREGILDAAEACFHEHGVARTTLEMIGARAGYT
                     RGAVYWHFKNKGEVLAAIVERVHLPFMQELERTSTDQRDTPVHDLRAVMIHSFIELSE
                     DERLRKTMEIMLRSDASADTRVLTELQQAGFRDALDRMERALRRAGDLGQLRDGADPK
                     IAARMLHATVLGVLHGAMVEPELMDLKRDGMLALDMTLAAYVKDGVFVPGTVPEPLPE
                     A"
     gene            9569..10555
                     /locus_tag="QEL58_002706"
     CDS             9569..10555
                     /locus_tag="QEL58_002706"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005419433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HDS1677160.1"
                     /translation="MILDNVVWGFIGCGSVTEKKSGPALAGTPGSRVAAAMRRNAALA
                     EDYARRHAIPRWYADADALIADPEVNAIYVATPPSTHMQYALQAIAAGKPVYIEKPMA
                     MDLGECERILEASARSGVPVFVAYYRRALPRFAKVKQLLDSGAIGTPRSVRATLHRPH
                     SAHATSPDFWRTNPAISGGGLFVDLGSHTLDLLDHLLGPLSDVSGLASSQAGAYAAED
                     SVSMCFRTGTGAHGIAQWSFCAFRRQDEIEITGDHGQLRFATFDDVPVLLETDAGMQA
                     FEIPNPPSIQQPLIATLVDELRGHGRSPSTGLSAARTNAVIDQVLRAYRARQ"
     gene            complement(10619..11992)
                     /gene="hslU"
                     /locus_tag="QEL58_002707"
     CDS             complement(10619..11992)
                     /gene="hslU"
                     /locus_tag="QEL58_002707"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006393294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease ATPase subunit HslU"
                     /protein_id="HDS1677161.1"
                     /translation="MSKIEVSSATMTPREIVQELDRHIVGQHDAKRAVAIALRNRWRR
                     MQLVPELRNEVMPKNILMIGPTGVGKTEIARRLATLANAPFVKVEATRFTEVGYVGKD
                     VEQIIRDLADTAVKLYREQAKVRVRTQAEERAEDRILDALLPRRSGGIGFDPDVARNE
                     PSAQDNETRIKFRKMLRNGELDEREIELDLAANVSMDIMTPPGMEEMGQQLKSMFANL
                     GGGAKAHKRTLTIKAARPLLIEEEAGKLVNEDDIRTAAIEACEQHGIVFIDEIDKVAK
                     RGDNVGGGDVSREGVQRDLLPLVEGSNVSTKYGTIKTDHILFIASGAFHLAKPSDLIP
                     ELQGRFPIRVELGALSKNDFVRILTEPKAALTKQYEALLATEGVKVSFTADAIERLAE
                     IAFQVNERQENIGARRLHTVLERLLDSLSYEAPDRDGETLAIDSAYVDAHLGELVQDP
                     DLSRYIL"
BASE COUNT         2019 a         4027 c         3920 g         2045 t
ORIGIN      
        1 ccaaggtcgg cacccaccag agcggatgac cgcggccggg gcgtgccaac caaggttggc
       61 acctaccaag gcacgactta cagcttgtag ccggaatgga tcgagacgat gccgccggtc
      121 aggttcttgt agtggcagcg ctcgaaaccg gcctgcccca tcatcgcctt cagttcgtcc
      181 tgcggcgggt gcttgcggat gctctcggcc aggtactggt agctgtccga atcattggcg
      241 aacagcttgc ccaacttggg caggatccgg aacgaatgga agtcgtagat cggcttgaac
      301 cagtcggcgg tgacttcgga gaactccagc acgcgggcct ggccgcccac cttcagcaca
      361 cgatacatct cgcgcaggcc ggcgtccttg tcggtcacgt tgcgcaggcc gaaggcgatg
      421 gtgaccagat cgaagctgtt gtccgggaac ggcagggcct cggcgttgca ctgcacgtag
      481 tccaggccga gcaccaggcc gcggttggtc aggcggtcac ggccgaccga cagcatgccg
      541 gcgttgatgt cgcccagcac caccgagcct tcggcgccca cgcgctcctt cagcagggcg
      601 gcgatgtcgc cggtgccacc ggccaggtcg agcacgcgat cacccggctt cacctgcgcg
      661 gtcgccacgt agtagcgctt ccacgcccgg tgcacgccca ggctcatcag gtcgttcatc
      721 aggtcgtagt tgcgcgcgac cgacgtgaac acctggccga ccagcttctg cttgtccttg
      781 gcggcgacgt cgcggaaccc gaaatgggtg gtaccggctt tgtaggggga ttcgctcatg
      841 gccccgatta tcgcaccgcc gggagccagc ggcaccccct gcccgtatca tggcgggcca
      901 cgacttaccg gagccccgca tgatcaccac gcccgactac caggccctgc tgcagaccgc
      961 catcgccgaa gcccgccagg gcctggccga aggcggcgtg ccgatcggcg cggcgctgta
     1021 ccacaacgac ggccgcctgc tcggctgtgg ccacaaccga cgcgtgcagg aaggcgaccc
     1081 ttccgtgcac ggcgagaccg acgcgttccg caaggccggc cgccagcgcc gctaccagga
     1141 caccatcatg gtcaccaccc tggccccgtg ctggtactgc tcggggctgg tgcgccagtt
     1201 caacatcggc acggtggtgg tgggcgaatc gcgtaccttc cagggcggca tcgactggct
     1261 gcgcgaaaac ggcgtcaacg tgatcgatct cgacagccag gaatgcgtcg atctgctcgg
     1321 cagcttcatt gcgcagcatc cggagatctg gaacgaagac atcggcgaat gagcaccgcg
     1381 cagcgtactg ttgaacctgc ttaatgaacg cttcagtgct ggcacgccct agtgccggca
     1441 gcgtttgcgg cgattgctgt gaacccgtgc acagtcagct ggactgcctg cacacgctgc
     1501 ggtaacaccc cacccgcgca gggcgcctag ggtggggtta ccgggacttc cttccccggc
     1561 ggagccagcc atgtgcgcgc acgccgtacg ccccacgccc gacccgatcc tcgccgccat
     1621 ccgcacgcgc ctgcagcagc agttcgcgct gcatcagcgt ggcgccctgt tctggacggc
     1681 ctaccagggc ctgcagctgg aactggtaca aggccgtccg ctcgaccacg agcgcctgtg
     1741 caacgcaatg gccgacatgg ccgaagaaat gggcgcggtc gagcatgcgc aactgatcgg
     1801 caatcgcaac gctggctgca catctccctg acgcggcatc cactgccgct caggccacac
     1861 tgcgatgaac ccccactccc atccacttca accgattgga tcgacatgca cgctgaagtt
     1921 cccaccattc ccccggtcat caacgtagac gccgagcttg accactggcg ccgccagcat
     1981 gccgacggcg cactgccgca caattcgttc ggctcgtacg taccgtggat caagttcgcc
     2041 tgcgattcgc tgatcaccca gccgcgcgcc agcaatgcgc agcgcgacga gatgttccag
     2101 acccagtacg ccctgcagat catgccgcgc ctgagtgaag cccaggcccg cgagttcgtc
     2161 gaccgctgct ggcagcatgt ctaccagacc agccgggtgc gcctgcagga cgctccgcgc
     2221 ctgcgcgcct gagctgcacg gcccctgcac aaggcactgc cgatcatcct cgtcacctga
     2281 gtgggacgac gacgatgaaa gcaagaaacc tgttcaatac gatcgccaag aaggccgcgg
     2341 ccgccaccgg ttcgccgtgg accttcctgg ctgcggtcgc gatcgtggtg atctggggca
     2401 tcagtggccc gctgttcggt ttcaacgaca cctggcagct ggtgatcaac accggtacca
     2461 ccatcatcac cttcctgatg gtgttcctga tccagcacac gcagaactcg gacaccgcgg
     2521 cgatgcagat caagctcgac gagctgatcc gcgcgacggc cgaggccaac aacgagctgc
     2581 tcgacctgga agagctggac gaagagcgac tggaagagat ccgccgcgag tacgagcgca
     2641 tggcgcgcga agccggcgac gcgctggcac gggtgcgtgc ctgccatgcc acccgccgcg
     2701 acgatgaggc ggtgtagcag gccctggaat gacaatgccg gccagcggcc ggcactacca
     2761 ccgatgatcg aggtaggtgc caaccttggt tggcacaggg ccagccgcct gcgctgacgc
     2821 attcgtgcca accaaggttg gcacctacca gaagcgctgt ttacccgcgc tcgtgccagc
     2881 cgccgcccag caccttgtac aacgtgatgc ggttggcctg ctgggccagc tgcgcctgca
     2941 gctgcgtctg ctgcgcgttg taggcggtac gccgtgcatc gagcagggtg acgaagctgt
     3001 ccaggccggc gtcgtagcgc gcctgtgaca ggcggttggc ctgttcggcc gcatccacca
     3061 ggcgctgctg tgcactcacc tgctcatcca ggctgacatt cagcgccagc gcgtcggcgg
     3121 tttcgcggaa gccgacctgg atcgatttct cgtactgcgc cagcgcgata tcgcggtcgg
     3181 cgttggcaat ggccaggttg gcgcgcagct tgccgccctg gaagatcggc agggtgatct
     3241 tcggcaggaa gctccacacg cgggtgccgc tgtcgaacag gttggacagt tcgctcgaac
     3301 cactgccgat gctgccggtc agcgagatgc tcgggaagaa cgccgcgcgc gccgcgccga
     3361 tgttggcgtt ggcggccagc agctggtgtt cggcggccat gatgtccggg cgctgcagca
     3421 gcacgtcgct gggcaggccg gccggcggcg gtgccagcgc cagcagctgc ggctcgatgc
     3481 tgtccggcag cagcgacgga tccaactggc caccggccag cagtgccagc gcgttgcggt
     3541 cctgggccag ctgcccacgc aggcgtgcgg catcggtgcg cgcggtttcc accagcgtac
     3601 gggtctgggt cagttccagt gccgaactgc cgccgcgctc atggcgggct tcggccaggc
     3661 gcagcgaatc ctcgtaggtc ttcagcgtgg catcggcgat cttcagccgc tgtgcgtcgg
     3721 caccataggt cagccacgcc gtggcggtct cggccaccag gctcagctgc gcattgcggc
     3781 ggttggccgc cacagcgaag tactgctgca gcgccgcctc actgaggttg cgcacgcggc
     3841 cgaacaggtc cagctcgaac tcggccacgc ccacgcccgc ggtgaactgc tcggtgacgc
     3901 cggcatcggt gccctggcgc tgcatctggc cggtgacggc cacgccgggt acgcggtcgg
     3961 cgcgctgcac gcggtactgg ccgcgtgcgc gttccacgtt gagcacggcc acgcgcaggt
     4021 cgcggttgtt ctgcagcgac tggtcgatca cctgctgcag gcgcgcgtcg gtgaagaagt
     4081 cgcgccagcc gacggcggca acatcggcca cctggccctg cgtggcctcg gccggccact
     4141 gcgccggaat ggccggcgcg acggcggtgt ccttcggcac cagggtggag cagctggcca
     4201 gcgcaagcgc ggcggcaatg gaaaggaaca gggatgcact tttcatggga tggcttccat
     4261 cggtactgcc ggatggcagg aggtcatgcc ggccagtggc cggcatgacc gtttcgctta
     4321 cgtggaggat ttgcgcttga acacgcgctg caccacgacg aagaacagcg gcacgaagaa
     4381 cacgccgagc acggtgccga cgatcatgcc gccgagcacg ccggtgccga tcgcctgctt
     4441 ggcgccggag ccggcaccgg tggagatcgc cagcggtacc acgcccatgc cgaaagccag
     4501 cgaggtcatc acgatcgggc gcaggcggtc gcgcacggca tgcatgatcg actcgatcag
     4561 gctggcgccc ttctccaggt tttccttggc gaactcgacg atcaggatcg cgttcttgct
     4621 ggtcaggccc accgtggtca acatcgccac ctggaagtag atgtcgcgtt ccaggccctt
     4681 gaaggtgttg gccagtaccg cgccgaggat gcccagcggg gcggccagca gcacggcggt
     4741 cggcacgctc cagctttcat acatcgcggc caggcacagg aacacgatca tcagcgacag
     4801 cgtgtacagc agcggcgtct gcgagccagc ctggcgttcc tggtaggaca tcgccgtcca
     4861 ttcgatgccg aagcccgccg gcagctgctt ggccagctgt tcgatctcgg ccatggcatc
     4921 accggaggcg acacccgggg ccggttcgcc ctggatttcc atcgccgaca caccgttgta
     4981 gcgctccagg cgcggcgaac cgtagtccca gtgcttgctg gcgaacgcgc tgaacggcac
     5041 catctcgccc ttgtcgttct tcaccgacca gaggtcgaag tcctccggca ccatgcggaa
     5101 cggctggtcg gcctgcacga acacacgctt gacgcggccg cgatcgacga agtcatcgat
     5161 gtacgaactg ccccacgcgg cggccagcgt gccgttgatc tggtcgatcg acagccccag
     5221 cgaggtcgcc ttggccgcat cgatgtcgat gcggaactgc ggcgtgtctt cctggccgtt
     5281 cggacgcacg ttggccagct tcttgctgcc tgcggcgagc cccagcagct ggttgcgcgc
     5341 ggccaccagg gcctcgtggc cctggccgct gttgtccttc aggaagaagg tatagcccga
     5401 ggcggtaccc agttccggaa tggccggcgg cgggaaggcg aagatgaagg catccttgat
     5461 ctggcccagt gccgccatcg cgcgcccggt gatcggcatc acgccagtgt cggcgtcacg
     5521 ctcgctccag tccttcagct tgacgaaggc catgcccgcg ttctgtccca tgccggcgaa
     5581 gctgaagccc tgcaccgaga acaccgattc caccgcatcc ttctcgttct gcaggaagtg
     5641 gttttccagt gccgtgatcg attccagcgt gcgctcctgg gtggcaccga ccggtgcctg
     5701 caccagcgcc atcagcacgc cctggtcctc gttgggcagg aacgaactgg gcaggcgcac
     5761 gaacagcacg cccatcagca cgaacagcgc cgccacgatg cccatgaagc gccacggacg
     5821 gtggatgatg ccgcgcacgc cacgctggta gctttcgctg gtgcggtcga aaccacggtt
     5881 gaaaccgttg aagaaacgac cggaccaacc cttgtgcgcg acgtggtgct cgcccttctt
     5941 cagcggcttg agcatggtcg cgcacagcgc cggggtcagc acgatcgcca ccagcaccga
     6001 caacgccatc gccgagacga tcgtggccga gaactggcgg tagataacgc cggtggagcc
     6061 gctcatgaag gccatcggca cgaacaccgc cgacagcacc aggccgatac ccaccagcgc
     6121 gccggtgatc tggcccatcg acttgcgggt cgcttcgagc ggcgacagtc cctcctcgga
     6181 catgatgcgc tcgacgttct ccaccaccac gatggcatcg tccaccagca ggccgatcgc
     6241 cagcaccatc gcgaacatgg tcaacatgtt cactgagaag cccagcatcg ccagcacgcc
     6301 gaaggtaccc agcagcacca ccggcacggc gatggtcggg atcagggtgg cgcggaaatt
     6361 ctgcaggaac aggtacatca ccacgaacac cagcacgatc gcttcgatca gggtctgcac
     6421 cacgcccttg atcgacacgc gcacgaacgg ggtggtgtcg tacgggatct cggccttcag
     6481 cccggccggg aagaagctct tcatgtcctg cagcgcggca tccacaccgg ccgcggtgtc
     6541 cagcgcgttg gcgccggtgg ccagggtgac cgccaggccg ctggccggct ggccgttgta
     6601 gcgggtgacg aagtcgtagg actcggcacc cagttcgacg cgggcgacat cacccaggcg
     6661 cagttcggca ccgtcctgcg caccgcgcac gatgatgttg cggaactgtt ccggggtctg
     6721 caggcgcgac tgcgcgttga tggtggcatt gagctgctgg cccttgaccg acggcgcacc
     6781 gccaagctgg ccgatggcca cctgggcgtt ctgcgccttc accgctgccg tcacttcggc
     6841 aaccgacagg ccgtaggtgt gcagcttgtt cgggtccagc cagatgcgca tggcgtactt
     6901 gccaccgaac acctggatat tgcccacgcc cgggacgcgg ctcagacggt cgacgacgtt
     6961 ggaaccgacg tagtcggcga tgtcgttggc gtccatgctg ccgttctcgg acacgaacgc
     7021 gatgacgttc aggaagcccg agctggactt ggccacgttg atgccctgcc gctgtacttc
     7081 ctgcggcagc agcggcatgg ccagctgcag cttgttctgc acctgcacct gggcgatgtc
     7141 cgggttggtg ccgctctcga aggtcagggt gatggtggcc tggccgttgg acgagctgtt
     7201 ggaggagaag tagatcaggc catcaaggcc cttcatgttc tgctcgatga tctgcgtcac
     7261 cgagtcctcg accaccttgg ccgatgcacc cggataggtg gcgctgattt ccaccgccgg
     7321 cggtgcgacg ttggggtaca tcgagaccgg cagcttgaac agggccaggc cgccggcgag
     7381 catgatgatg atggcgatca cccacgcgaa gatgggtcga tcgatgaaaa agcgtgccat
     7441 ggggttctcc gcttacttcg cgtcgccggc cggggcggca ggctgggcgg ctgcggccgg
     7501 cttggccggt gcagcgccct tctcggtggc cttgaccggc atgccggggc cgatcttctg
     7561 caggccttcg acaatgacct tgtcgccggc cttcaggccg tcatcgacca gccacttgtc
     7621 gccgaccgtg cggctgacct tgaccgggcg cacttcgacc ttgttgtcct tgtcgaccac
     7681 catcgccgtg gtgtcgccct tcggatcacg ggcgatgccc tgcatcggca ccagcaccgc
     7741 atcgctgcgc acgccgccgc cgatcaccgc acgcacgtac atgcccggca tcagcaggcc
     7801 gtcggggttg tccaccttca cgcgcaggcc gaagctgccg gtggccggat cgacgctgac
     7861 ctcggaaaac tccagcgtgc ccttgtgctc gaaggtgctg ccgtcttcca tcaggatgct
     7921 gaccggcagg gtctggttgt cctgcaggcg gccggcggcc agttcgcgac gcagctgtag
     7981 cagctcggcc gaggactggg tcaggtcgac atagatcggg tccagctgct gcacggtggc
     8041 cagcgcgttg gcctggccgg cgctgaccag cgcaccctgg gtgacgctgg acttgccgat
     8101 gcggccactg atcggcgcgg tgatgcgggc atagccgagg gtgacgttgg ccgcgtccag
     8161 cgaggccttg gcggcaccga catcggcctc ggcctgcttc tgcgcggcca cggcattttc
     8221 caggtcctgc tggctgaccg cgtcgacctt ggccagctcg gtgatgcgct tggcgctcag
     8281 ccgggcggcg ttggcggtgg cttcggcgcg ggccagctgg gcgcgggcgt tgttggcctg
     8341 ggcgcggtag ctggcgtcat cgagctggta cagcggctca ccggccttga ccatgccgcc
     8401 ctcggtgaac aggcgcttgg caacgatgcc attgacctgc gggcgcactt cggccaccag
     8461 gaaggcattg gtacggccgg gcagttcgcg ggtcaggccc acggtctcgg acttcagcgt
     8521 gaccacggtg acgtcacccg ggccctgttc gggggcctga ggttggccgc cacaggcagc
     8581 cacggtcgcg gcgatggcca gcgacagcgc gaagggtcgg attcggctca gcaacatgac
     8641 ggaaaggctc ttaggggaag gaatctcaaa aaacgctgat acgggccaga agcgccagca
     8701 gacaacgcat gccggcgatg agtggtagcc agaacgggcc tgccacgcac acgacgggaa
     8761 tgatgggtgc gaaatataca tacatgcgtg tttgtttgta aaccggtaca attcagccac
     8821 gtttcacccg cactcgtacc cacacccatg gcccgcaaga ccaaagagga cacccaggca
     8881 acccgggaag gcatccttga cgccgccgaa gcctgcttcc atgaacacgg cgtggcccgt
     8941 accacgctgg agatgatcgg cgcgcgcgcc ggctacaccc gtggcgcggt gtactggcac
     9001 ttcaagaaca agggcgaggt gctggccgcg atcgtcgagc gcgtgcatct gcctttcatg
     9061 caggaactgg agcgcacctc taccgaccag cgcgacacgc cggtgcatga cctgcgcgcg
     9121 gtgatgatcc actcgttcat cgagctgtcc gaggacgagc gcctgcgcaa gaccatggag
     9181 atcatgctgc gcagcgatgc ctcggccgat accagggtgc tgaccgaact gcagcaggcc
     9241 ggcttccgcg atgcgctgga ccggatggaa cgggcgttgc gtcgtgccgg ggacctgggc
     9301 cagctgcgcg acggcgccga cccgaagatc gccgcgcgca tgctgcacgc cacggtgctg
     9361 ggcgtgctgc acggggcgat ggtcgaaccg gaactgatgg acctcaagcg cgacggcatg
     9421 ctcgcgctgg acatgaccct ggccgcctac gtgaaagacg gcgtattcgt gcccggaacg
     9481 gtgcccgagc cgttgccgga ggcgtgaacc gggttgcgcc tgccgccgcg gccctgcacc
     9541 ctccctgctt ctccccggaa acgcagcgat gatcctggac aacgtggtat ggggcttcat
     9601 cggttgcggc agcgtcaccg aaaagaagag tggccctgcg ctggccggca cgcccggttc
     9661 acgggtggct gccgcgatgc gccgcaatgc ggcactggcc gaggattacg cacggcgcca
     9721 tgcgattccc cgctggtacg ccgatgccga tgcgctcatc gccgatccgg aggtgaacgc
     9781 gatctacgtc gccacgccgc cctccaccca catgcagtac gcgttgcagg ccattgcggc
     9841 gggcaagccg gtctatatcg aaaagcccat ggccatggac cttggcgagt gcgaacgcat
     9901 cctggaagcc agcgcacgca gtggcgtacc ggtgttcgtt gcctactacc gccgtgccct
     9961 gccccgcttc gcgaaggtca agcagttgct ggacagcggc gcgatcggta cgccgcgcag
    10021 cgtgcgcgcg accctgcatc ggccacactc ggcgcatgcc acatcgccgg acttctggcg
    10081 gaccaaccct gccatctccg gcggcggcct gttcgtcgat ctcggctcgc acaccctgga
    10141 cctgctcgac catctgctgg gaccgctgag cgatgtcagc ggcctggcca gttcgcaggc
    10201 aggcgcgtat gccgccgagg acagcgtctc gatgtgcttc cgcaccggaa ccggtgcgca
    10261 cggcatcgca cagtggagtt tctgtgcgtt ccgccgccag gatgagatcg aaatcaccgg
    10321 cgaccatggg cagctgcgtt ttgccacctt cgatgacgtc ccggtgctgc tggaaaccga
    10381 cgcgggcatg caggcgttcg agatcccgaa cccgccatct atccagcagc cgttgattgc
    10441 caccctcgtg gatgaactac gcggccacgg acgctcgccc tcgactggcc tcagtgccgc
    10501 ccgcaccaac gcggtgatcg accaggtact gcgggcctac cgcgccagac agtgaatcca
    10561 cgccatgcat ggatgccctt cgcgccaaaa aaaggccgcc tttcggcggc cttgtgcgtt
    10621 acaggatata gcggctcagg tccgggtcct gcaccagttc gcccaggtgg gcatcgacgt
    10681 aggcactgtc gatggccagc gtttcaccat cgcggtccgg cgcctcgtag ctgagcgaat
    10741 ccagcaggcg ctccagcacg gtatgcaagc ggcgcgcacc gatgttttcc tgacgctcgt
    10801 tcacctggaa ggcgatctcg gccaggcgct cgatggcatc ggcggtgaag ctgaccttga
    10861 cgccctcggt ggccagcagc gcttcgtact gcttggtcag cgcggccttc ggctcggtca
    10921 ggatgcgcac gaaatcgttc ttgctcagcg cgcccagctc cacgcggatc gggaagcgac
    10981 cctgcagctc cggaatcagg tcgctgggct tggccaggtg gaacgcaccc gatgcgatga
    11041 acaggatgtg gtcggtcttg atcgtgccgt acttggtgga cacgttggag ccttccacca
    11101 gcggcagcag gtcgcgctgc acgccttcgc gcgacacatc gccaccgccc acgttatcgc
    11161 cacgcttggc gaccttgtcg atctcgtcga tgaagacgat gccgtgctgc tcgcaggctt
    11221 cgatcgccgc ggtgcggata tcgtcctcat tgaccagctt gccggcttct tcctcgatca
    11281 gcagcgggcg cgcggccttg atggtcagcg tgcgcttgtg cgccttggca ccgccaccga
    11341 ggttggcgaa catcgacttc agctgctggc ccatttcctc catgcccggc ggggtcatga
    11401 tgtccatgct gacattggcg gccaggtcga gttcgatctc gcgttcgtcc agttcgccat
    11461 tgcgcagcat cttgcggaac ttgatgcggg tctcgttgtc ctgcgccgac ggctcgttgc
    11521 gggccacgtc cggatcgaaa ccgatgccgc cactgcggcg cggcaacagc gcatcgagga
    11581 tgcggtcttc ggcgcgttct tcggcctgcg tacgcacgcg caccttggcc tgttcgcgat
    11641 acagcttcac tgcggtatcg gccaggtcac ggatgatctg ctcgacgtcc ttgccgacgt
    11701 agcccacttc ggtgaagcgg gtcgcttcga ccttgacgaa cggcgcgttg gccagcgtgg
    11761 ccaggcggcg cgcgatctcg gtcttgccga cgccggtcgg gccgatcatc aggatgttct
    11821 tcggcatcac ttcattgcgc agctcgggca ccagctgcat gcggcgccag cggttgcgca
    11881 gggcgatggc caccgcgcgc ttggcgtcgt gctggccgac gatgtgccgg tccagttcct
    11941 gcacgatctc gcgcggggtc atggtggcgg aggaaacttc gatcttcgac atggatgtgc
    12001 tcacggattc g
//
LOCUS       DAOKIP010000125        11857 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.125,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000125 DAOKIP010000000
VERSION     DAOKIP010000125.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 11857)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11857)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11857
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.125"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(116..1003)
                     /gene="ampE"
                     /locus_tag="QEL58_002708"
     CDS             complement(116..1003)
                     /gene="ampE"
                     /locus_tag="QEL58_002708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006398758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="regulatory signaling modulator protein AmpE"
                     /protein_id="HDS1677162.1"
                     /translation="MFTTLAAVLVALALGHVAPAAAASLRRFDGFRRWLGWLDARGGK
                     AWQSPAGVALALLPPLLLMALLAWLLRGVLFGLPSLLLGVVVLAWCWGPRDLDRDIEA
                     IIDADDAATRQAAVRNLQTAGGSLREDVPSLVEATVLNALRRWFAVLFWFLLLGPAGA
                     LGYRLLALMAESPMRARVPVEPLALAQRLLGWIEWPVAQLMAFSMALVGNFDTAWKAW
                     RQAHGERLAGNIGFLGAVARASVNAELREDAHDYTEAGLLPVWQRLPDLRDAMSLVWR
                     MLLLWLAILALLVIAGWVT"
     gene            complement(1137..2042)
                     /gene="nudC"
                     /locus_tag="QEL58_002709"
     CDS             complement(1137..2042)
                     /gene="nudC"
                     /locus_tag="QEL58_002709"
                     /EC_number="3.6.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005411301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+) diphosphatase"
                     /protein_id="HDS1677163.1"
                     /translation="MPNTSSPLSGFAFVGEPLERADALRDDADALARLWPGARILVLD
                     QDGSAFTGDDDQPLALTGADIGGGPGAAIFLGLRGEQAWFSVEAGSVTITAPRRLDLR
                     QAALLWSMADATAFSYARGMSYWHSRTRFCGVCGGAVAFARGGFVGRCAQCSTEHYPR
                     VDPAVIVAVENQGRLLLGRQSNWAPRRYSVLAGFVEPGETFEQTVVREVHEESKVRVT
                     ACQYLGSQPWPFPGALMIGFRAQAQDDLPSVDGELEDARWFSADEVGAALARDVEDDG
                     QGIRVSPPISISRGLIEHWYRQQKG"
     gene            complement(2179..2571)
                     /gene="erpA"
                     /locus_tag="QEL58_002710"
     CDS             complement(2179..2571)
                     /gene="erpA"
                     /locus_tag="QEL58_002710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005411302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster insertion protein ErpA"
                     /protein_id="HDS1677164.1"
                     /translation="MSTLVSLPGATPAAAPDYQSLERPLNFTESAAAKVRSLIQEEGN
                     PDLALRVYIEGGGCSGFQYGFEFDENRAEDDLAVQTSGVTLLVDPLSLQYLMGAEVDY
                     TESLTGAQFVIRNPNAKTTCGCGSSFSM"
     gene            complement(2603..3067)
                     /locus_tag="QEL58_002711"
     CDS             complement(2603..3067)
                     /locus_tag="QEL58_002711"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014648656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymer-forming cytoskeletal protein"
                     /protein_id="HDS1677165.1"
                     /translation="MFGNSKSNRDSQLVVDALIGNQVVIRGDVEFSGGLYVEGRIHGK
                     VIAAEGASGATLTVAEHGVIEGEIRAQVVVISGRLDGDVHATEKVELTPSARVNGNVH
                     YQVVEMNAGAQLNGRLIHASAPMAALPAPEADDANGGKGDTAARRKLAEAMA"
     gene            complement(3072..3815)
                     /locus_tag="QEL58_002712"
     CDS             complement(3072..3815)
                     /locus_tag="QEL58_002712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005419791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677166.1"
                     /translation="MNNRPPMRVQVRLPGAPQSPVDRRRLLVIGGIWLLSLVLAVLGG
                     CWMATPRDAQGQRLQAAEKHAETLQAQLTELRQKQATLEASDRISRAANTEVQSSLAE
                     RDEEIAGLRADVAFYERLVGSTSQRKGLNTHSIEFSPEAAGTWQYTAVLTQNLNRGAI
                     SQGQMRFTVEGVKNGKLATISWDDLHQRSKVPGQDYSFRYFQQITGSVMLPADFTPQR
                     VRVTLGSGTGGTTQVFDWKQAGAPASKGE"
     gene            3995..4612
                     /locus_tag="QEL58_002713"
     CDS             3995..4612
                     /locus_tag="QEL58_002713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4126 domain-containing protein"
                     /protein_id="HDS1677167.1"
                     /translation="MTEAHLFVIGILLAWLAGIRVYLTVFGVGLAGLLGWVDLPPALQ
                     ATESWWVLGTSAALAVTEFFADKIPGVDSAWDLVQTLARVPAGAFLAAATLSPDGQLG
                     TGALAAGAGVALASHGLKAGTRALLNTSPEPASNWVASAAEDTVVIGGLALALAHPWI
                     ALVVVLACSLAGALLVWLVWRTLWKGVRWLARGAATDSPRQPGTG"
     gene            4657..6543
                     /locus_tag="QEL58_002714"
     CDS             4657..6543
                     /locus_tag="QEL58_002714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HDS1677168.1"
                     /translation="MAAIESPAGARPGRAETPPADHWQRWAVEAVTHAPAAPAAVTAQ
                     GGTADAPSINSAPPPLPGPSALAEAGNNDQAPPASDSPYRVLIVEDDRAQALFAQSVL
                     HGAGMQAIVHSDADGALQAIKDHRPDLILMDLHLPGLDGMRLTALIRQQPGLQLLPIV
                     FLSGDPDPERQFEVLDSGADDYLSKPIRPRHLIAAVANRIRRARAQAATLPGASGAPA
                     TSNPETGLPTRHHVLQQLNAALAHRDPGGVLFVEVSSALGLRERYGYAAFERLMVQAG
                     QRLAEAGHPHLLARLNDNSFLLLARTADEDSLEGIAAALREQLSARAFVIRDDESVHL
                     RGVVGYAPLSSGFDDANSALEAVERTTLQARLLSAGVAGHVHREAISEQEHLALLEGQ
                     LELAYQPIVAVAGGNTAQYQLLLRLRQADGTVLAAGQVIPAAEAAGRIADLDQQVMDH
                     ALGLLDLYRHATQPLNLFVSQSLRTLQRDAFADWLLESLHQRDLPGSALVIDVRLPDA
                     LIHTVPLLQFCQRMAGAGVRFCLSQFEPGGEADALLTHLPLSFVRMAARFSSSHANPA
                     TREELRRAIEQAHAAGLQIIGQQIEDPQAAAAMWVGGVDYIQGNMVQSAGSDLNFDFH
                     NAVL"
     gene            6545..8743
                     /locus_tag="QEL58_002715"
     CDS             6545..8743
                     /locus_tag="QEL58_002715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019336611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HDS1677169.1"
                     /translation="MPLWGVLVALGAAAIALLLLGLRLRARNQALAQLQRGHSTLAAE
                     RDQLRRTTERQGQLEQQLLQAKQAAEAAVLAKGEFLATMSHEIRTPLNGILPMLELIA
                     RGPLGEDQRQMLATASASSQQLLRIVDDILDYSRLEAQALELEITSFNLRDLLDGVVQ
                     LMQRAADAKGLSLALQLDPAVRLPVRGDPVRLRQVLSNLLANAIKFTARGQVLLRVQR
                     LGEGAAQHQLRFEIIDTGIGIDEVLQARLFQSFSQADASTTRIYGGTGLGLAICKRII
                     DLMQGRIGVQSTPGQGATFWFEIPLLKVPGDLPAMARPPAALLLCSADAILQARVERI
                     AAHHGLQVQVLAQPGAVVERLRAPPRPGQPAPAWLLVDAHARRAGEATLQQALAERGE
                     EDMLQVLWLQDDAVAARPRQQRLPARFDDAALHALLAVPVAHARPAALLANAEDGLPA
                     PTLPPLHLRVLLVEDNTVNRMVAEQLLRVFQCEVRNAADGEQALLALREGGMDVVLMD
                     CQMPVLDGYAATRHWRAEETAFGRQRLPIIAMTANAMAGDRERCLQAGMDDYLSKPIA
                     RATLHALLKRWGQRSGNAAASNPLGGDAPATGPVLTAEHGAALPGTKSQAAPQPVLDR
                     DVLDELHAVIGESASQIVSVFLDDAPAMVQQLQQAAQNGDAPRLQAIAHSLKSSSANI
                     GALSLSAVAQRIEHEARSDSLQRPAVAVALLVAEFARARVALTGYLAQHR"
     gene            complement(8767..9237)
                     /gene="bfr"
                     /locus_tag="QEL58_002716"
     CDS             complement(8767..9237)
                     /gene="bfr"
                     /locus_tag="QEL58_002716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002808230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacterioferritin"
                     /protein_id="HDS1677170.1"
                     /translation="MKGDTKVIEFLNKVLYNELTAINQYFLHAKMLKNWGIKELAEHE
                     YKESIDEMKHADMLADRILFLEGLPNFQALGKLRIGENPTEILQCDLSLERDGVVTLR
                     EAVAYSDSVGDYVSRQLFVKILDSEEEHIDWLETQLDLIERIGEPKYLLSKLEE"
     gene            complement(9381..9590)
                     /locus_tag="QEL58_002717"
     CDS             complement(9381..9590)
                     /locus_tag="QEL58_002717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003483089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacterioferritin-associated ferredoxin"
                     /protein_id="HDS1677171.1"
                     /translation="MYVCICNGVTDHQIREAAGNGVSTVAELTMRTGCGATCGSCLDM
                     AGELLAKARATHDLPLPVLGLAQVA"
     gene            complement(9699..10319)
                     /locus_tag="QEL58_002718"
     CDS             complement(9699..10319)
                     /locus_tag="QEL58_002718"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005411310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA pyrophosphohydrolase"
                     /protein_id="HDS1677172.1"
                     /translation="MIDPDGYRPNVGIVLMRQDGQVFWARRVRRDGWQFPQGGMNTDE
                     TPVEAMYRELQEETGLLPEHVEVLGATPGWLRYKLPARAIRRNERQVCIGQKQVWFLL
                     RLTGDESHVKLDHTDSPEFDHWRWVDFWYPVEHVVMFKRGVYARALRHLAPLARGVAG
                     QGVTAMPKSAAEAWMPGHTAGHERPRKRPRTRGYWPKKAQGDGPAS"
     gene            10440..10516
                     /locus_tag="QEL58_002719"
     tRNA            10440..10516
                     /locus_tag="QEL58_002719"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:10474..10476,aa:Met,seq:cat)
     gene            10572..10646
                     /locus_tag="QEL58_002720"
     tRNA            10572..10646
                     /locus_tag="QEL58_002720"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:10604..10606,aa:Gln,seq:ctg)
     gene            complement(10926..11318)
                     /gene="rpsI"
                     /locus_tag="QEL58_002721"
     CDS             complement(10926..11318)
                     /gene="rpsI"
                     /locus_tag="QEL58_002721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004083670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S9"
                     /protein_id="HDS1677173.1"
                     /translation="MAITQNYGTGRRKSSTARVFLRKGSGNITVNGRPLDEFFGRETA
                     RMIVRQPLELTKNTESFDILVTAAGGGTTGQAGAIRLGIARALVEYDETLKSELRKAG
                     FMTRDAREVERKKVGLHKARRATQFSKR"
     gene            complement(11321..11749)
                     /gene="rplM"
                     /locus_tag="QEL58_002722"
     CDS             complement(11321..11749)
                     /gene="rplM"
                     /locus_tag="QEL58_002722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006451009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L13"
                     /protein_id="HDS1677174.1"
                     /translation="MSTFTAKNETVQRDWYLVDAEGKTLGRLATELARRLRGKHKPVY
                     TPHVDTGDYLVVINAEKIAVTGKKLQDKMYHRFTGYIGNLKTESLAQALERHPERVIE
                     IAVKGMLPKGPLGRQMYRKLKVYAGTEHPHAAQQPQVLDI"
BASE COUNT         1963 a         4087 c         3898 g         1909 t
ORIGIN      
        1 gtttacggcg tgtcctgcag tcccacaccg ccccgcccaa gcctcagcaa cccagagccg
       61 ctttggctgc ggctttggcc tctgcaggtg cagggctgca agccctgcaa tacaactacg
      121 tcacccagcc tgcaatcacc agcagggcca ggatcgccag ccacagcagc agcattcgcc
      181 acaccaggct catcgcatca cgcaggtccg gcagccgttg ccacaccggc agcagtcccg
      241 cctcggtgta gtcgtgcgca tcctcgcgca gctcggcatt gacgctggca cgcgccaccg
      301 ctccgaggaa accgatgttc ccggccaggc gctcgccatg ggcctggcgc caggccttcc
      361 acgccgtatc gaagttgccc accagcgcca tcgagaacgc catcagctgc gccaccggcc
      421 actcgatcca gcctagcagg cgctgcgcca gcgccagcgg ttccaccggc acgcgggcgc
      481 gcatcgggct ttcggccatc agcgccagca gcctgtaacc cagcgcaccg gccgggccca
      541 gcagcaggaa ccagaacaac accgcgaacc agcgccgcag cgcattgagc accgttgctt
      601 cgaccagtga cggcacgtcc tcgcgcaggc tgccaccggc cgtctgcagg ttgcgcaccg
      661 ccgcctgccg cgtcgcggca tcgtcggcgt cgatgatcgc ttcgatatcg cggtccaggt
      721 cgcgcggccc ccagcaccat gccagcacca ccacgcccag cagcagcgac ggcaggccga
      781 acagcacccc gcgcagcagc caggccagca gggccatcag cagcagcggc ggcagcaggg
      841 ccagggccac gcctgcgggg ctctgccagg ccttgccacc ccgggcatcc agccaaccca
      901 gccagcgccg gaagccgtcg aaacggcgca gcgaggcagc agcggccggg gcgacatggc
      961 ccagggccag cgccaccagc acggcagcca gagtggtgaa catggcgggt ctccctacga
     1021 aacagaacgc tcgcgccgct accttacctg tcgcagcggc gccctcagcg gtgaaccgga
     1081 ctctaacccg ggccgtgttc aggtggcggc aatacagcca ccgcgcctgg cccgcttcaa
     1141 cccttctgct ggcggtacca gtgctcgatc aggccacgcg aaatcgagat cggcggcgac
     1201 acgcggatgc cctggccatc gtcctcgaca tcgcgtgcca gcgccgcgcc cacctcgtcg
     1261 gcactgaacc agcgcgcatc ttccagctca ccgtccacgc tcggcagatc atcctgcgcc
     1321 tgtgcacgga aaccgatcat cagcgccccc gggaacggcc agggctgcga gccgaggtac
     1381 tggcaggcgg tcacccgcac cttgctctcc tcgtgcacct cgcgcaccac ggtctgctcg
     1441 aaggtctcgc cgggctcgac gaagccggcc agcaccgagt agcggcgcgg cgcccagttc
     1501 gactgccggc cgagcagcag ccggccctgg ttctccaccg ccacgatcac cgccggatcc
     1561 acccgcgggt aatgctcggt agagcactgc gcgcagcgac cgacgaagcc gccacgggcg
     1621 aacgccacgg caccgccgca cacgccacag aagcgggtac gcgagtgcca gtaggacatg
     1681 ccgcgggcat agctgaaggc ggtcgcatcg gccatcgacc acagcagcgc ggcctggcgc
     1741 aggtcgaggc ggcgtggtgc ggtaatggtc acgctgccgg cttcaactga aaaccacgcc
     1801 tgctcgccac gcaggccgag gaagatcgcg gcaccggggc caccgccgat gtcggcgccg
     1861 gtcagcgcca gtggctgatc gtcatcgccg gtgaaggcgc tgccgtcctg atcaagcacg
     1921 aggatgcgcg cgcccggcca caggcgcgcc agtgcatcgg catcgtcgcg cagggcatcg
     1981 gcgcgctcca gcggttcgcc cacgaaggcg aaaccggaaa gcggcgaaga agtattgggc
     2041 atccggcaag cgtgccgcca atcgatgcag gtggcaagcc gcaggctttg cggaaaccag
     2101 cggtgggtgt ggagcctgct ccacacacct tgtcgcgcag gggacgggcc ccgcgcatcc
     2161 acgcatggcg tgaatctact acatgctgaa actgctgccg cagccgcagg tggtcttcgc
     2221 gttcggattg cggatcacga actgggcacc ggtcaggctt tcggtgtagt ccacctcggc
     2281 acccatcagg tactgcaggc tcagcggatc gaccagcagc gtcacgccgc tggtctgtac
     2341 cgccagatcg tcctcggcac ggttctcgtc gaactcgaag ccatactgga agcccgaaca
     2401 gccgccacct tcgatgtaca cgcgcagggc caggtcgggg ttgccctctt cctggatcag
     2461 ggatctgacc ttggcggccg ccgactcggt gaagttcagc ggtcgctcca gcgactggta
     2521 atcgggcgcg gcggccgggg tggcgccggg cagggagact agcgtgctca tgccgtcagc
     2581 atgggggtgc cggggagggc tttcaagcca tcgcctcggc cagcttgcgg cgcgcggcgg
     2641 tgtcgccctt gccgccattg gcatcgtcgg cctccggggc cggcagggcc gccatcgggg
     2701 cgctggcatg gatcaggcgg ccgttcagct gggcgcccgc attcatctcc accacctggt
     2761 aatggacatt gccattgacc cgcgcgctcg gggtcagttc gaccttctcg gtggcgtgca
     2821 cgtcgccgtc caggcggccg ctgatgacca ccacctgggc acggatctca ccctcgatca
     2881 cgccatgctc ggcgaccgtc agggtggcac cactggcgcc ttcggcggca atcaccttgc
     2941 cgtggatgcg gccttccacg tacaggccac cactgaattc cacatcaccg cggatcacca
     3001 cctggttgcc gatcagggca tccaccacca gctggctgtc acggttggat ttgctgtttc
     3061 cgaacatctg cctactcccc tttgctggcc ggcgcgccgg cctgtttcca gtcgaatacc
     3121 tgggtggtac cccccgtacc actgcccaat gtcacccgca cgcgttgcgg ggtgaagtca
     3181 gccggcagca tcacgctgcc ggtgatctgc tggaagtacc ggaacgagta atcctgtccc
     3241 ggcaccttgc tgcgctggtg cagatcatcc cagctgatcg tggccagctt gccgttcttc
     3301 acgccttcca cggtgaaacg catctgcccc tggctgatgg caccgcggtt gaggttctgg
     3361 gtcagcacgg cggtgtactg ccaggtgccg gccgcttccg ggctgaactc gatcgaatgg
     3421 gtgttcaggc ccttgcgctg gctggttgaa ccgaccaggc gctcatagaa ggcgacgtcg
     3481 gcgcgcaggc cggcgatctc ctcatcgcgc tcggccagcg aggactgcac ctcggtgttg
     3541 gcggcgcggc tgatgcggtc ggaggcttcc agcgtggcct gcttctggcg cagctcggtc
     3601 agctgcgcct gcagcgtctc ggcgtgcttc tcggcggcct gcaggcgttg gccctgcgca
     3661 tcgcgcgggg tcgccatcca gcagccgcca agcaccgcca gcaccaggct gagcagccag
     3721 atgccgccga tcaccagcag gcggcgacga tcgaccggcg attgcggcgc gccgggcagg
     3781 cgcacctgca cgcgcatggg agggcggttg ttcatgggtg gtttccgggg catcgcgagg
     3841 gcgacaccgg tacggcccct gtggcaaacg acgggctagt gtatgacagg acgggtgggt
     3901 ttcctgcgca gtggccggcc gcggtctgtg gcgttcaggc acgccatcgt cgatagtgag
     3961 gccccccgca cagttccgtc gccggagcat cgccatgacc gaagcccacc tgttcgtgat
     4021 cggcatcctg ctggcctggc tggccggcat ccgcgtctac ctcaccgtgt tcggcgtcgg
     4081 cctggccggc ctgctcggct gggtcgacct gccaccggcg ctgcaggcca ccgaatcgtg
     4141 gtgggtgctg ggtacctcgg cggcgctggc agtgaccgaa ttcttcgccg acaagatccc
     4201 cggcgtggac tcggcgtggg atctggtgca gaccctggca cgcgtgcccg ccggtgcctt
     4261 ccttgccgcc gccacgttgt cgccggacgg ccagctgggg accggcgcac tcgccgccgg
     4321 tgccggtgtc gcgctggcca gccatggcct gaaggccggc acccgcgccc tgctcaatac
     4381 ctcaccggaa ccggccagca actgggtggc gtcggccgcc gaagacaccg tggtgatcgg
     4441 cggcctggcg ctggccctgg cccatccctg gatcgcgctg gtggtggtgc tggcctgcag
     4501 cctcgctggc gcgctgctgg tctggctggt ctggcgcacc ttgtggaaag gcgtgcgttg
     4561 gctggcgcgc ggcgcagcga cggacagccc gcggcaaccc ggcaccggtt gatcgccggg
     4621 cttgccgcat aatgaaggcg aacaccagga gcaccgatgg ccgcaatcga atcccccgcg
     4681 ggcgcccgcc cgggacgcgc tgaaacccct ccggccgatc attggcaacg ctgggccgtc
     4741 gaggcggtca cccacgctcc cgccgcaccg gcagcggtca cggcacaggg cggcacggcc
     4801 gatgcaccgt cgatcaacag cgcgccgcca ccgcttcccg gcccttcagc gctggcagaa
     4861 gccggcaaca acgaccaggc gccgcccgca tccgattcgc cctatcgcgt gctgatcgtc
     4921 gaggacgatc gcgcccaggc attgttcgcg cagagcgtgc tgcacggtgc cggcatgcag
     4981 gcgatcgtgc acagcgatgc cgacggtgcg ctgcaggcga tcaaggacca ccgcccggac
     5041 ctgatcctga tggacctgca cctgcccggg ctggacggca tgcgcctgac cgcgctgatc
     5101 cgccagcaac ccggcctgca gctgctgccg atcgtattcc tcagcggcga cccggacccg
     5161 gagcgccagt tcgaagtgct cgacagtggc gccgatgact acctgagcaa gccgatccgc
     5221 ccgcgccacc tgatcgccgc cgtggccaac cgcatccggc gcgcgcgtgc gcaggccgcg
     5281 accctgccag gcgcctccgg tgcgccggcc accagcaatc cggaaaccgg cctgccgaca
     5341 cgccaccacg tattgcagca gctcaacgcc gcgcttgccc accgcgaccc gggtggcgtg
     5401 ttgttcgtcg aagtctccag cgcgctgggc ctgcgcgagc gctatgggta tgccgccttc
     5461 gaacgcctga tggtgcaggc cggccagcgc ctggccgagg cgggccaccc gcacctgctg
     5521 gcacgcctga acgacaacag cttcctgctg ctggcgcgca ccgccgatga ggacagcctg
     5581 gaaggcatcg ccgcggccct gcgtgaacag ctgtcggcgc gcgcgttcgt gatccgcgac
     5641 gacgaatccg tgcatctgcg cggcgtggtc ggctatgccc cgctgtcttc cggattcgac
     5701 gatgccaaca gtgccctgga agccgtcgaa cgcaccaccc tgcaggcgcg cctgctgagc
     5761 gccggcgtgg ccggccacgt gcaccgcgag gcgatcagcg aacaggagca tctggcgttg
     5821 ctggagggcc agctggagct ggcctatcag ccgatcgtcg ccgtcgccgg cggcaacacc
     5881 gcgcaatacc agctgctgct gcgcctgcgc caggccgatg gcacggtgct ggcggccggc
     5941 caggtgattc ctgccgcgga agccgccggg cgcatcgccg acctcgacca gcaggtgatg
     6001 gaccatgcgc tgggcctgct ggacctgtac cggcacgcga cccagccgct gaacctgttc
     6061 gtctcgcagt cgctgcgtac cctgcagcgc gatgccttcg ccgactggct gctggagtcg
     6121 ctgcaccagc gcgacctgcc cggcagcgcg ctggtcatcg atgtgcgcct gcccgacgca
     6181 ctgatccaca ccgtgccgct gctgcagttc tgccagcgca tggccggtgc cggcgtgcgc
     6241 ttctgcctca gccagttcga accgggtggg gaagccgacg cgttgctgac ccacctcccg
     6301 ctgtcgttcg tgcgcatggc agcacgcttc tccagcagcc acgccaaccc tgccacccgc
     6361 gaggaactgc gcagggcgat cgagcaggcc catgcagccg ggctgcagat catcggccag
     6421 cagatcgaag atccgcaggc ggcggccgcg atgtgggtgg gcggcgtcga ctacatccag
     6481 ggcaacatgg tgcagtcggc cggcagcgac ctgaacttcg acttccacaa cgcggtgctc
     6541 tgacgtgccg ctgtggggcg tgctggttgc ccttggtgcg gctgccatcg cactgctgct
     6601 gttgggcctg cgcctgcgtg cgcgcaacca agcgctggcc cagctgcagc gcgggcacag
     6661 cactctggcc gccgaacgcg accagctgcg ccgtaccacc gaacgccagg gccaactgga
     6721 gcagcagctg ctgcaggcca agcaggccgc cgaggccgcg gtgctggcca agggcgagtt
     6781 cctggccacg atgagccatg agatccgcac cccgctcaac ggcatcctgc cgatgctgga
     6841 gctgatcgcg cgcggccccc tgggcgagga ccagcgacag atgctggcca ccgcctcggc
     6901 cagttcgcag cagctgctgc gcatcgtcga cgacatcctc gactattcac ggctggaagc
     6961 acaggcgctg gaactggaga tcaccagctt caacctgcgt gacctgctcg atggcgtggt
     7021 gcagctgatg cagcgcgccg ccgacgccaa gggcctgtcg ctggcgttgc agctggaccc
     7081 agcggtgcgc ctgccggtac gcggcgaccc ggtacgcctg cgccaggtgt tgagcaacct
     7141 gctggccaac gcgatcaagt tcacggcacg cggccaggtg ctgctgcggg tacagcggtt
     7201 gggcgaaggc gcagcgcagc accagctgcg cttcgagatc atcgacaccg gcatcggcat
     7261 tgacgaggtg ctgcaggcgc ggttgttcca gtccttcagc caggccgacg cctccaccac
     7321 ccgcatctac gggggtaccg gcctgggcct ggccatctgc aagcgcatca tcgacctgat
     7381 gcagggccgc atcggcgtgc agtccacgcc cggccagggc gccacgttct ggttcgagat
     7441 tccgctgctg aaagtgcccg gcgacctgcc ggccatggca cgtccgcccg ctgcactgct
     7501 gctgtgcagc gccgatgcga tcctgcaggc gcgcgtcgag cgcatcgctg cccaccatgg
     7561 gctgcaggtg caggtgctgg cacagcctgg cgcggtggtc gagcgcctgc gcgcgccgcc
     7621 acgccccggg cagccggcgc cggcctggct gctggtcgac gcgcatgcac gccgcgcagg
     7681 tgaagccacg ctgcagcagg ccctggccga acggggtgag gaagacatgc tgcaggtgct
     7741 atggctgcag gacgacgccg ttgcggcgcg cccgcggcag cagcggctgc ccgcacgttt
     7801 cgatgatgcc gccctgcatg cgctgctggc ggtgccggtc gcgcacgcgc ggcccgccgc
     7861 attgctggcc aatgctgaag acggactgcc cgcgccgacg ttgccgccgt tgcacctgcg
     7921 cgttctgctg gtggaagaca acacggtcaa ccggatggtg gccgagcagc tgctgcgcgt
     7981 attccagtgc gaggtgcgca acgccgccga tggcgagcag gcattgctcg ccctgcgcga
     8041 aggcggcatg gacgtggtgt tgatggactg ccagatgcca gtgctggatg gctacgccgc
     8101 cacccgtcat tggcgcgccg aggaaacggc attcgggcgg cagcgactgc caatcatcgc
     8161 gatgaccgcc aatgcgatgg ccggtgaccg cgaacgctgc ctgcaggccg gcatggacga
     8221 ctacctgtcc aagccgatcg cacgcgccac gctgcatgcg ctgttgaagc gctggggaca
     8281 gcgatcgggc aatgcggcag cgtcgaaccc gctcggcggc gatgcgcccg ccaccggccc
     8341 ggtcctgact gccgagcatg gcgcggccct gccaggtacg aagagccagg cggcgccgca
     8401 accggtgctg gatcgcgatg tgctggacga actgcacgcg gtgatcggcg agagcgccag
     8461 tcagatcgtc tcggtgttcc tggacgatgc tccggcaatg gtgcagcaac tgcagcaggc
     8521 cgcacagaac ggcgacgcgc cgcgcctgca ggcgatcgca cacagcctca agtcatcaag
     8581 cgcgaatatc ggcgcgttgt cgctgtctgc ggtggcgcag cgcatcgagc atgaagcccg
     8641 cagtgacagc ctgcagcgcc ctgccgtggc agtggcgctg ctggtggccg aattcgcccg
     8701 cgcgcgcgtc gcgctgacgg gttacctggc acagcatcga tagcgtcgag caagctcgac
     8761 gctacgtcac tcttccagct tgctcagcag gtacttcggc tcgccgatgc gctcgatcag
     8821 gtccagctgg gtttccagcc agtcgatgtg ctcttcttcc gagtcgagga tcttcacgaa
     8881 cagctggcgg ctgacgtagt cgccaaccga atcggaatag gccacggcct cgcgcagggt
     8941 gaccacgccg tcgcgttcca gcgacaggtc gcactgcagg atctcggtcg ggttctcgcc
     9001 gatgcgcagc ttgcccagcg cctggaaatt cggcaggcct tcgaggaaca ggatgcggtc
     9061 ggcgagcatg tcggcatgct tcatctcgtc gatcgattcc ttgtactcgt gttcggccag
     9121 ttccttgatg ccccagttct tcagcatctt ggcgtgcagg aagtactggt tgatcgcggt
     9181 cagctcgttg tagaggacct tgttgaggaa ttcgatgacc ttggtgtcgc ccttcatggg
     9241 gatgctcctg cacgctgaaa acgcaggcac tttagcgcct tgcgcagcct cgtgaaggaa
     9301 cgcgaatcgt gcgcattggc ctgtgcggcc agcagtgaag gatgcgaaag cgcggcgtca
     9361 acgcgctgcg aaagaaacgg tcaggcgacc tgggccaggc ccaataccgg cagcggcaga
     9421 tcgtgggtgg cgcgtgcctt ggccagcagc tcgccggcca tgtccaggca ggaaccgcag
     9481 gtggcaccac agccggtacg catggtcagt tcggccaccg tgctgacgcc attgccggcg
     9541 gcttcgcgga tctggtggtc ggtgactccg ttgcagatgc agacgtacac aggcgggaac
     9601 cgggctgaca ggccagaagc ggcctgttgg ctattccaat ggaaacgaga atggttgtca
     9661 atcagagacc tgaaccatta tcgataccgt tcagcccgtc agctggccgg gccatcgccc
     9721 tgtgccttct tgggccaata gccccgggtc cgcgggcgct tgcggggtcg ctcgtgcccg
     9781 gccgtatggc ctggcatcca ggcctcggcg gcgctcttgg gcatggcggt gacgccctgc
     9841 ccggccacac cgcgcgccaa cggcgccagg tgtcgcaggg cacgcgcata gacgccgcgc
     9901 ttgaacatca ccacatgctc caccgggtac cagaagtcca cccagcgcca atggtcgaac
     9961 tcgggcgagt cggtgtggtc cagcttcaca tgggattcgt cgccggtcag gcgcagcagg
    10021 aaccagacct gcttctggcc gatgcagacc tgccgctcgt tgcggcggat ggcccgcgcc
    10081 ggcagcttgt agcgcagcca gccgggtgtc gccccgagca cttccacatg ctcaggcagc
    10141 aggccggtct cttcctgcag ttcacgatac atggcctcga caggcgtctc gtcggtattc
    10201 atgccaccct gcgggaactg ccagccgtcc cggcgcacac gtcgtgccca gaacacctga
    10261 ccatcctgcc gcatcagcac gatgccgacg ttcggtcgat agccgtccgg atcgatcacg
    10321 atgcggactc ctaaaaaatc tactggtcgg gactatccca tgccctctgc cgccccacaa
    10381 gcacgataca aaagtgttga caggggcgat acacatccgc agaatagcgg gctcaccaag
    10441 gctatgtagc tcagccggtt agagcacagc actcataatg ctggggtcgg tggttcgagt
    10501 ccacccatag ccaccacact gaaaatcaag ttgttttcca gtgtgaaaag tgagaaaata
    10561 gttgcacgtt ttgccccgtc gccaagcggt aaggcacctg actctgactc aggcattcgg
    10621 tggttcgaat ccatccgggg cagccaaatt aaaagcaaaa ggccagatcg aaagatctgg
    10681 ccttttgctt ttaatttggt cacgcatttc accttatccc agcgcccgtc ggcgcgcccc
    10741 cttgaacatc aagggggctc tcccccagac agaaaccggg gtcaggtatg cagaccacgg
    10801 gtagtgccgg ccgctggccg gcaacctcga aatgcatgac cccagaacga caaaagcccg
    10861 gccgaagccg ggcttttgct ttccaaccag cgggctcccg agggagccca accaggcgcg
    10921 gtaaatcagc gcttggagaa ctgggtggcg cggcgggcct tgtgcagacc gaccttctta
    10981 cgctcgactt cacgggcgtc acgggtcatg aagccggcct tgcgcagctc ggacttcagg
    11041 gtttcgtcgt actcgaccag agcacgggcg atgcccagac ggatcgcacc ggcctggccg
    11101 gtggtgccgc cgccagcagc ggtgaccagg atgtcgaagc tttcggtgtt cttggtcagc
    11161 tcgagcggct ggcgcacgat catgcgcgcg gtctcacgac cgaagaactc gtccagcgga
    11221 cggccattga cggtgatgtt gcccgaaccc ttgcgcagga acacgcgagc ggtggaggac
    11281 ttgcggcggc cagtgccgta gttttgagtg atagccatga ttagatatcc agaacctgcg
    11341 gctgctgtgc ggcgtgcgga tgctcagtgc cggcgtagac cttgagcttg cggtacatct
    11401 ggcgacccag cgggcccttc ggcagcatgc ccttcacggc gatctcgatc acgcgctccg
    11461 ggtggcgctc cagcgcctgg gccagggatt cggtcttcag gttgccgatg taaccggtga
    11521 aacggtgata catcttgtcc tgcagcttct tgccggtgac ggcaatcttt tctgcattga
    11581 tgacgaccag gtagtcgccg gtatcaacgt gcggggtgta gaccggcttg tgcttgccac
    11641 gcagacggcg ggccagctcg gtggcgagac ggcccagggt cttgccctcg gcgtcgacga
    11701 ggtaccagtc gcgctggacg gtctcgttct tggcagtgaa agtgctcatg aagaactcta
    11761 ggttaggtcg ggctcattgc ggcgaaaggc tcgccggaac tctgccacgc gttgtgaaaa
    11821 ggtgaagcgt aagaggcggg attgtacgca ccctggc
//
LOCUS       DAOKIP010000126        11524 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.126,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000126 DAOKIP010000000
VERSION     DAOKIP010000126.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 11524)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11524)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11524
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.126"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            113..1432
                     /gene="tolB"
                     /locus_tag="QEL58_002723"
     CDS             113..1432
                     /gene="tolB"
                     /locus_tag="QEL58_002723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005418511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Tol-Pal system beta propeller repeat protein
                     TolB"
                     /protein_id="HDS1677175.1"
                     /translation="MKKMPRWLAVFAALLLPFAAVAQQKGLDIDIIGGNASALPITIV
                     PMPYQGSAAAPQTDVAGVVRADLERSGQFRTLPEAQIVEKPVRGGDIQFATWRALKQN
                     YIVVGRVLDAGAGAYRVEYELFDVPKGERLLGLAMTARGNAMRDVAHQMADAIYEKIT
                     GVRGAFWTRIAYVTASGKGDAMRYALMVADSDGYNPQTIVRSAEPLLSPSWSPDGGKL
                     AYVSFERGNSAIYIQNIATGARELVTSFRGINSAPAFSPDGRKLALTLSRSGNPEIYV
                     MDLGSKQLTQLTNHFAIDTEPTWAPDGSAVYFTSDRGGRPQVYKVGAGGGSAERVTFQ
                     GNYNAKPTVSYDGKKIAVAQGSGNSYKIAMMDSSLGSPRWSTLSPGSLDESPSFAPNA
                     SMVLYAAREGGRGVLYAVSADARVRQRLVLADGDVREPAWSPYRTQR"
     gene            1497..2015
                     /gene="pal"
                     /locus_tag="QEL58_002724"
     CDS             1497..2015
                     /gene="pal"
                     /locus_tag="QEL58_002724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010344309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-associated lipoprotein Pal"
                     /protein_id="HDS1677176.1"
                     /translation="MNKSTRVLLVSLLSVAVLAGCSKKVKEEPAAPVDTGTSTTTPTG
                     PSTSGLYGPGDLDTDACLRQRVVYFDLDKEDVKPEFQAIMACHAKYLRDRPSSRITLQ
                     GHTDERGSRAYNQALGERRGNGVNSALQANGGSASQLTVVSYGEERPVCTESNESCWS
                     QNRRVEIVYTAQ"
     gene            2019..2837
                     /gene="ybgF"
                     /locus_tag="QEL58_002725"
     CDS             2019..2837
                     /gene="ybgF"
                     /locus_tag="QEL58_002725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019304871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tol-pal system protein YbgF"
                     /protein_id="HDS1677177.1"
                     /translation="MRIGIKLMLVVAAALVAAAPAHAQRQSLADRVGALEQQMYNNSA
                     NQDLLNQINQLRQQVTSLQASIEQLQHDNAQLKQSAQDQYLDLDSRLNRLEGGNAAPA
                     LPPVPATAPKATPAPATPAAAATSERPPSVHGDAGSLAATGDERTSYNVAFESLKAGK
                     YDDSAQLFLSFLQLYPNGVYAPNALYWLGESYYATRNFPMAETQFRELLSRYPTHDKA
                     AGGLLKVGLSQYGEGKVDQAQQTLETVVVQYPGSDAARTAQDRLQSIRLGKQIR"
     gene            3039..3740
                     /gene="queE"
                     /locus_tag="QEL58_002726"
     CDS             3039..3740
                     /gene="queE"
                     /locus_tag="QEL58_002726"
                     /EC_number="4.3.99.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-carboxy-7-deazaguanine synthase QueE"
                     /protein_id="HDS1677178.1"
                     /translation="MTAVIPSNAVATPSDIVQSPLPRLKITEIFTSLQGEADTAGWPT
                     VFVRLTGCPLRCQYCDTAYAFHGGTWWDIDDIVAEVLAQGVRHVCVTGGEPLAQKRCL
                     VLLQKLCDAGMDVSLETSGALDVSAVDPRVSRVVDIKTPGSAEVARNRWDNLPLLTAR
                     DQIKFVICSREDYDWAKALLAEHELVKRCTVFFSPSKGEITARQLADWIVEDRLPVRF
                     QMQLHKILWNDEPGR"
     gene            3819..4484
                     /gene="queC"
                     /locus_tag="QEL58_002727"
     CDS             3819..4484
                     /gene="queC"
                     /locus_tag="QEL58_002727"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011038130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine synthase QueC"
                     /protein_id="HDS1677179.1"
                     /translation="MKKAVVLLSGGMDSAAVIAMAQEQGFAVHALSVRYGQRHTSELD
                     AAARVAKAQGVVAHKTVDVDLRSIGGSALTDDIDVPEAGGTGIPVTYVPARNTIMLSL
                     ALGWAEVLGANDIFCGVNAVDYSGYPDCRPEFVAAFQALANLATKSGVEGAGIKVHAP
                     LQFLSKGQIVSEGVRLGVDFGLTVSCYNADANGAACGHCDACRLRAQGFAEAGVADPT
                     LYA"
     gene            complement(4596..4841)
                     /locus_tag="QEL58_002728"
                     /pseudo
     CDS             complement(4596..4841)
                     /locus_tag="QEL58_002728"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012511893.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            5077..5152
                     /locus_tag="QEL58_002729"
     tRNA            5077..5152
                     /locus_tag="QEL58_002729"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:5110..5112,aa:Lys,seq:ttt)
     gene            complement(5812..6174)
                     /locus_tag="QEL58_002730"
     CDS             complement(5812..6174)
                     /locus_tag="QEL58_002730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677180.1"
                     /translation="MTMNLWTATADKGESTDTFMARVGREALLVLGPSQAVICGQLVS
                     TAGQDGIQLKTTNKPADCRAPGSTLPYMFVSRSETGAERLASFQSELSGARYTVEPAG
                     IEFRNGTTTRLVASYLEK"
     gene            complement(6329..6658)
                     /locus_tag="QEL58_002731"
     CDS             complement(6329..6658)
                     /locus_tag="QEL58_002731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010481695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677181.1"
                     /translation="MLNALLIAALAAGPAAPVPYADCLLGNIQPGLSDRAMQLVQEAC
                     AVKHPDSFNASLELERTYSTQRQARFDADRAAAERAANAAANAAAVAAQVAAEREAAR
                     AKNAKPR"
     gene            complement(6737..7096)
                     /locus_tag="QEL58_002732"
     CDS             complement(6737..7096)
                     /locus_tag="QEL58_002732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677182.1"
                     /translation="MTRRPPQAPYCTLDSVNDDDSPAPDLSTFWGCLKRIRDGDGADG
                     LPWPETDLPPGRDQAMARAERAAVGMLTVAEMLHAAERCRSMATPDRHLDEGVIDGLF
                     FACRGLAELVCRDIRLA"
     gene            7833..8684
                     /locus_tag="QEL58_002733"
     CDS             7833..8684
                     /locus_tag="QEL58_002733"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019337549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDS1677183.1"
                     /translation="MRLIVLSLLLSAVSATPLMAAEPAPSAQAAAATPLVIGETFTVQ
                     SKALGETRRINVYRPQPWGLDPKTPLPVLYMPDGGIGEDFLHVAGLVQVLSGNGSMRP
                     FLLVGIENTERRRDMTGPSKDPQDQKIAPRIGGSAAYRTFLRDELMPQVRQRYPTTDE
                     RALIGESLAGLFVVETLLQEPTLFNSYIALDPSLWWNQGTMLAGAAKQLPAVTRAQPR
                     VFLASSGQPELAASAAQLATLLEQPSPSPLVKYLPLPEETHATIYHPAALQALRTLFP
                     APPPVSP"
     gene            8767..9705
                     /locus_tag="QEL58_002734"
     CDS             8767..9705
                     /locus_tag="QEL58_002734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014648114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDS1677184.1"
                     /translation="MQRVRGWSVAACLAVSGCAMSVAPPATQSEAKESAATAAPGVVL
                     PDTEALRVHDPVGRDYPVWVALPADYAAHPEKHYPVLYVTDALYSFPLVRSVRNMVGQ
                     KGVNIEDFILVGLPPQEGLTSKQSRSRDYTPSDPARTDPRDYSDDVSYGGAAHYRDFL
                     AERVLPMIDARYRTDPARRAYAGHSYGGLFGAYVLTTRPDMFRTYILSSPSLWFDNHL
                     VPRLQAEAKAPTQPTTVVLSVGSFETVKPEPRYFTRNDMLRHNAEFAEQLRNSGRSLK
                     VENMVIDDEDHFTVYPDMITRALLKVFPGTGPYSSG"
     gene            complement(9773..10195)
                     /locus_tag="QEL58_002735"
     CDS             complement(9773..10195)
                     /locus_tag="QEL58_002735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008267633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HDS1677185.1"
                     /translation="MLLSKRHVEPRVLLIEDAEETRELSRLALESQACHVVGVSSAEA
                     ALGLLAAGERFDLLFTDVNLGRVSGIEAANQVRDLYPYLPILVTSGMDQHRVLPQLRD
                     GIHFLPKPYNMSELLDAIRLCFRHADVGVLTGPDAQAA"
     gene            complement(10288..11055)
                     /locus_tag="QEL58_002736"
     CDS             complement(10288..11055)
                     /locus_tag="QEL58_002736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014038204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane metalloprotease"
                     /protein_id="HDS1677186.1"
                     /translation="MTTLSRLPNLVRLLLALLGVGLGLNLRDIAAAIGAPIPALPIPY
                     GGSLLDNALAVLLALLLAALLRPRGVGLFASLGLHGNGWSGPLCVLLASLPCWLGLAL
                     LGTPNTALTVLDAAMLAVLFPVAEEMLFRGLGFILLVKIVRGPWPLLALPQVLLFGWV
                     HWLGFGGFEGGGTALFIGAVIAFGGFIFAWLDHLDGDTLWCGLVLHVSMNLAWNVFSL
                     DDAIALGWQATSLRIGTALLAVAALAWHRRRRRPTRL"
     gene            11205..11519
                     /locus_tag="QEL58_002737"
     CDS             11205..11519
                     /locus_tag="QEL58_002737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010481706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-TFIIB domain-containing protein"
                     /protein_id="HDS1677187.1"
                     /translation="MLCPVCTTQTLQMAERHGIEIDYCPGCRGVWLDRGELDKIIERA
                     GAAVPPPAPAQQQPASTPPPVMHRDTRHLGQRYEDNRGQQHGHGYKKKKKDSFLSELF
                     DF"
BASE COUNT         1997 a         3886 c         3745 g         1896 t
ORIGIN      
        1 agagcacggg ctggaactga cccggaattc acgtaccctt ggttcatgat tgcgaagcgg
       61 ttcacttccg ctttgctatc cctcgttccg gtttccccct attgagcgct ccatgaaaaa
      121 gatgcctcgc tggcttgccg tgtttgcggc cctgttgctg cctttcgctg ccgtcgcgca
      181 gcagaagggg ctggatatcg acatcatcgg cggcaatgcc tccgcgctgc cgatcaccat
      241 cgtgccgatg ccctaccagg gttcggcggc tgcgccgcag accgacgtcg ccggcgtggt
      301 ccgcgccgac ctcgagcgct ccggccagtt ccgcacgctg ccggaagcgc agatcgtcga
      361 aaagccggtc cgcggcggtg acatccagtt cgccacctgg cgcgcgctga agcagaacta
      421 catcgtggtc ggccgcgtgc tcgacgccgg tgccggcgcc taccgcgtcg agtacgaact
      481 gttcgacgtg cccaagggcg agcgtctgct gggcctggcg atgaccgcgc gcggcaatgc
      541 catgcgcgac gtcgcgcacc agatggccga tgccatctac gagaagatca ccggtgtgcg
      601 cggcgccttc tggacccgca tcgcctacgt gaccgccagc ggcaagggcg acgccatgcg
      661 ctatgcgctg atggtggccg actccgatgg ctacaacccg cagaccatcg tgcgttcggc
      721 cgagccgctg ctgtcgccgt cgtggagccc ggatggcggc aagctggcct acgtcagctt
      781 cgagcgtggc aactcggcga tctacatcca gaacatcgcc accggcgcac gcgagctggt
      841 caccagcttc cgcggcatca acagcgcccc ggcgttctcg ccggacggcc gcaagctggc
      901 cctgaccctg tcgcgttcgg gtaatccgga aatctacgtg atggacctgg gtagcaagca
      961 gctgacccag ctgaccaacc acttcgccat cgacaccgag ccgacctggg caccggacgg
     1021 cagcgcggtg tacttcacct ccgaccgcgg cggccgtccg caggtctaca aggtcggtgc
     1081 gggcggcggc agcgccgagc gcgtgacctt ccagggcaac tacaacgcca agcccaccgt
     1141 gtcctacgat ggcaagaaga tcgccgtcgc ccagggttcg ggcaacagct acaagatcgc
     1201 gatgatggac agctcgctgg gttcgccccg ctggagcacg ctgtcgccgg ggtcgctgga
     1261 tgaatctccg agctttgcgc ccaacgcaag catggtgttg tatgccgccc gcgaaggtgg
     1321 ccgtggtgtg ttgtatgccg tttcggccga tgcgcgggtc cgccagcgcc tggttctggc
     1381 cgatggtgat gtgcgcgaac cggcatggtc cccataccgt acccagcgct aaaagagtgt
     1441 taatattttc gctgtcttga acccctcatc ggcctaggag ccacaaaggt atcgccatga
     1501 acaagtccac ccgcgttctg cttgtttccc tgctgtctgt ggccgtcctg gccggttgct
     1561 cgaagaaggt gaaggaagag ccggcagccc cggttgacac cggcacctcg accaccaccc
     1621 cgaccggccc gtcgacctcc ggcctgtacg gcccgggcga cctggacacc gacgcttgcc
     1681 tgcgccagcg cgttgtctac ttcgacctgg acaaggaaga cgtgaagccg gaattccagg
     1741 ccatcatggc gtgccacgcc aagtacctgc gtgaccgtcc gtcctcgcgc atcaccctgc
     1801 agggccacac cgacgagcgc ggttcgcgcg cgtacaacca ggccctgggc gagcgtcgtg
     1861 gcaacggcgt caactcggcc ctgcaggcca acggtggctc ggcttcgcag ctgaccgtcg
     1921 tgtcctacgg tgaagagcgt ccggtctgca ccgagtcgaa cgagtcctgc tggtcgcaga
     1981 accgtcgcgt cgaaatcgtc tacaccgcgc agtaatccat gcgcattggc atcaaactga
     2041 tgctggtcgt tgcggcagcc ctcgtggctg ccgcaccggc gcatgcacag cgacagagcc
     2101 tggccgaccg tgtcggcgcg ctcgagcagc agatgtacaa caacagtgcc aaccaggacc
     2161 tgttgaacca gatcaatcag ctgcggcagc aggtcaccag cctgcaggcc tcgatcgagc
     2221 agttgcagca cgacaacgcc cagctcaagc agtccgccca ggaccagtac ctggacctgg
     2281 acagccgcct gaaccggttg gaaggaggca acgccgcccc agccctgccg cctgttccgg
     2341 cgactgcgcc gaaggccact ccggccccgg caacccccgc agcggcggcc acttccgagc
     2401 ggccgccttc ggtccatggt gatgccggca gcctggccgc caccggcgac gagcgcacct
     2461 cgtacaacgt ggccttcgaa tcgctgaagg ccggcaagta cgacgattcg gcgcagctgt
     2521 tcctgagctt cctgcagctg tacccgaacg gcgtctatgc gccgaacgcg ctgtactggc
     2581 tgggcgagag ctattacgcg acccgtaatt tcccgatggc cgagacccag ttccgtgaac
     2641 tgctctcgcg ctatccgacc cacgacaagg ccgctggcgg cctgctcaag gtcggtctct
     2701 cgcagtatgg cgagggcaag gtcgaccagg cccagcagac gctggagacc gtcgtggtgc
     2761 aataccccgg ctcggacgcc gcgcgcaccg cgcaggaccg cctgcagtcg atccggctgg
     2821 gcaagcagat ccgctgatcc ggcgtacaat acgttccctg tagagccgag cccccgctcg
     2881 gctgtttgcg tttccggctg ccgtaacgcc ggccgggctg cgttctcccg gctgggccat
     2941 gccgcccggt cgctgctgta gagccgggcc atgctcggct gctttcgtta ccggccacgg
     3001 tagccccccg ccacgtgccc caccaagacg tacccgccat gaccgccgtt atcccgtcca
     3061 atgccgtcgc cacccccagc gacatcgtgc agtcgccgct gccacgcctg aagatcaccg
     3121 agatcttcac ctcgctgcag ggcgaagccg ataccgccgg ctggccgacc gtgttcgtgc
     3181 gcctgaccgg ctgcccactg cgttgccagt attgcgacac cgcctatgcc ttccacggcg
     3241 gcacctggtg ggacatcgac gacatcgtgg ccgaggtgct ggcccagggc gtgcgccatg
     3301 tctgcgtgac cggtggcgag ccgctggcgc agaagcgctg cctggtgctg ctgcagaagc
     3361 tgtgcgatgc cggcatggac gtctcgctgg aaacctccgg cgcgctggac gtcagtgcag
     3421 tggatccgcg cgtatcgcgc gtggtcgaca tcaagacccc gggttcggcc gaagtggcgc
     3481 gcaaccgctg ggacaacctg ccgctgctga ccgcgcgcga ccagatcaag ttcgtcatct
     3541 gcagccgcga ggattacgac tgggccaagg ctctgctggc cgagcacgag ctggtcaagc
     3601 gttgcaccgt gttcttctcg cccagcaagg gcgagatcac cgcgcgccag ctggccgact
     3661 ggatcgtaga agaccggctg ccggtgcgct tccagatgca gttgcataaa atcctgtgga
     3721 acgacgagcc gggccgatga gcccgggcag cgttccctga tgtagctccg gcgcgggaca
     3781 gcgtgctggc tttcccctcc caaccggatg ttttacccat gaagaaggca gtcgtgcttc
     3841 tctccggcgg catggattca gccgccgtca tcgccatggc ccaggaacag ggcttcgccg
     3901 tgcatgccct gagcgtgcgc tatggccagc gccatacctc cgaactggat gccgccgcgc
     3961 gcgtggccaa ggcccagggc gtggtcgcgc acaagaccgt ggacgtggac ctgcgcagca
     4021 tcggcggctc ggcgctgacc gacgacatcg acgtgcccga ggccggcggt accggcatcc
     4081 cggtcaccta cgtgccggcg cgcaacacca tcatgctgtc gctggccctg ggctgggccg
     4141 aagtgctcgg cgccaacgac atcttctgcg gcgtcaacgc cgtggactac tccggctacc
     4201 cggactgccg ccccgagttc gtggccgcgt tccaggcgct ggccaacctg gccaccaagt
     4261 cgggcgtgga aggcgccggc atcaaggtgc acgcaccgct gcagttcctc agcaagggcc
     4321 agatcgtcag cgaaggcgtg cgcctgggcg tggacttcgg cctgaccgtt tcctgctaca
     4381 acgccgacgc caacggcgcc gcctgcggcc actgtgacgc ctgccgcctg cgcgcgcagg
     4441 gcttcgccga agccggcgtg gccgacccga cgctgtacgc ctgagatgat gggggcgatg
     4501 cccccaatgg tgggtgccaa ccttggttgg cacgctccct cggtgggtgc gaaccgttgg
     4561 ttcgcactcc ctgacccgcc gggcacagcc cagcgttacc gctgccgcaa ccaccccgac
     4621 gcttcaataa acgcccgcac cgcccccgca tcggcgtagt ccaactcgat catccgcgcg
     4681 atcgccgcct tctcatccgc ctgctgctgc atgtactcct gcgcgatgcg atacccggcg
     4741 taatagccca catcactcac cccgaacggg ttgcgggcgc tgttgtacag ccagttatcc
     4801 agggcatcgc cgtccatctc ggcgatgaag cgcgtgcgga tcccggtctc gcatcgcgct
     4861 gatgcgcccg gcacgaaccg cacaaccgac ggggcagagc caggcgatgt tgtcggcggc
     4921 gagctgggat gcggtggacg ctgtgtggat ccagcacggg caggccggac ggagcgtgcc
     4981 ggcccctggc cggcgaccgc ggcaccccca ggcttcgcgc ggcccctcaa agtagggtag
     5041 aatgcccacc ccgccgaaag gctggggcaa tgcaatgggc cgttagctca gtcggtagag
     5101 cagaagactt ttaatctttt ggtcgaaggt tcgaatcctt cacggcccac catcgcactc
     5161 aatgatctgc gtcattccca aggcaccggc ttccggtgct ttttgcattg ggtgcctgca
     5221 tggcacctgc aatatcagca ggcgttggcc cttccaatca cgtgcgcgtg gttaccctga
     5281 tggtggcgcc ggacgaaccc ccttgcccgc ggtgagggag gcagcgtggt tcgtcggtgt
     5341 ggctggactc gatcgccgtc atcatctcga caagccgtgt ggtcggttgc cgggagtggc
     5401 tcaacggcag gccctgacag cacaagtcca gagcatgggc caacccgtcc ggtcttcgca
     5461 gccaatgcca tcgacgatgc cggcgcgctt ccgatggtct gtccctgtag cagcggaatc
     5521 tgtggctgtt cggcatcatg gaggccgaac cgggtcagcg ctccaacgcc cctcatccag
     5581 ttggacttct tcggccgtcg acccgcaccg gtcccgacac caccttggtg taggtgaagt
     5641 ccagacgctc gttcggagtg gacgcgaacg ccgcgccatg gaggaacgcc acactgaagc
     5701 tgttcctcac cgcagggcgg gcagcaggca catagggcac caccgtgccg tcgcgggccc
     5761 acgcgcaggt ggctgatcgg gatcgcggca aattaactgc aggccattct gctacttctc
     5821 caggtagctt gcgaccagcc tggtagttgt gccgtttctg aactcgattc cagccggctc
     5881 taccgtgtac cgcgcaccag acagctcact ctggaacgat gccagtcttt cggcccccgt
     5941 ctcggatcga ctgacaaaca tgtagggaag cgtcgagccg ggagcgcggc aatcggcagg
     6001 cttgtttgtc gtcttgagct gaatgccgtc ctgcccagcg gtgctcacca gttggccaca
     6061 gatcacagcc tgcgatggcc ccagaaccag cagtgcttca cggccaacgc gggccatgaa
     6121 cgtatccgtt gactctccct tgtctgcagt agcggtccaa aggttcatcg tcatgccacg
     6181 tctgctggcg tactcgacgc ccccactcag atggacccat cggtaggcct ccgctgcggg
     6241 aactggaggt ccctgcttct gcaccggcgg ctgagcgagc accggtagtg ccagcaggga
     6301 aagcgcaacc ggcagtgcga gcgtgcatct accgtggctt ggcattcttg gccctcgccg
     6361 cctcgcgttc cgccgccacc tgcgcggcaa cggctgctgc gttcgcagcg gcgttcgcag
     6421 cccgctccgc cgcggcacga tccgcatcga accgcgcctg tcgttgggtg ctgtaggtgc
     6481 gctccagttc cagcgaagca ttgaaactgt cgggatgctt cacggcacag gcctcctgca
     6541 ccagttgcat ggcacgatca gacagcccgg gctggatgtt gccgagcagg cagtcggcgt
     6601 acggtacggg cgcggccggg ccggcggcca gcgcggcgat gagcagggca ttcaacatgc
     6661 aaacctcctt gtaggtttcg aagggactgg cgatccgtcc ggcccaagta tgaaccggtt
     6721 cgggttgcaa cggcggctac gccaggcgga tatcccggca caccagttcc gccagcccgc
     6781 ggcaggcgaa gaacaaccca tcgattaccc cttcatccag atggcggtcg ggcgtggcca
     6841 tcgaccggca gcgttcggcg gcgtgcagca tttccgccac ggtcagcatg ccgacggcgg
     6901 cacgctcggc gcgtgccatc gcctgatcac ggccgggcgg cagatcggtt tccggccagg
     6961 gcaggccgtc ggcgccgtcg ccatcgcgga tgcgcttgag gcacccccag aacgtgctga
     7021 gatccggcgc ggggctgtca tcgtcattga cgctgtcgag ggtgcagtag ggcgcttggg
     7081 gcggacgtcg ggtcatctcg gattcctcgg ctcttgggca gtagcaccac cgtgcaggac
     7141 gggtggcgga cggtgcatgg ctgcaagccc ggagacatca cgcagtaacc ggcgggtccg
     7201 aaaaccccca cgcaccgccc gccatgaagg ccgacggatc acccgccggc acggtccgga
     7261 gacggtgccg acgggtgagc gcaaacaaca gcgtgaatgt cattacgggc ttgcaggccc
     7321 ggtgccaccc gttgtcggtg gcgctgcata ttggttacgc ccgcgcgcgg atttcaatat
     7381 gaaatgtggg gaaaaatttc tgccaaccgc agcgcgacac tgttgtcaca gaggttccga
     7441 atgcagcgag cgacaggacg cgacgtatcc gttcttgtgg cctggggaat cgcgttgtgg
     7501 aatggcgcaa gccgcattgg atgacgcatt cgctgtgaac tggggcgtgt aaagctggct
     7561 tcacttccat gatccgtagc agcggcgtga gcgtgttaca cggcaagatt ccggtgcgaa
     7621 cgcgacacat ccgtgcaggc tccctgtgga gccgagccat gctcggccgc ggttcgcgtg
     7681 gggtgctgag ccgagcgtgg gctcggctct acagtgatcc atccacgcag ggcgtggatc
     7741 tacgcatctg gcacgggtgt tgagcgtgcc gaagccgccg atccctctgg cggagcgcta
     7801 tgctcggcca tctttcccag gatgggccgc ccatgcgcct gatcgtgctg tcgctgttgt
     7861 tgtccgccgt ctccgccaca ccgctgatgg ccgccgaacc ggcgccgtcc gcacaggccg
     7921 ccgccgcaac cccgttggtc attggcgaga ccttcaccgt acagtcgaag gcgctgggcg
     7981 aaacgcgccg catcaacgtc taccgcccgc agccgtgggg cctggacccg aagacgccgc
     8041 tgccggtgct ctacatgccc gacggcggta tcggcgagga cttcctgcat gtggccgggc
     8101 tggtgcaggt actgagcggc aacggcagca tgcgtccgtt cctgctggtc ggcatcgaga
     8161 acaccgaacg ccgccgcgac atgaccggcc ccagcaagga tccgcaggac cagaagatcg
     8221 cgccgcgcat cggtggctcg gcggcttacc gcacgttcct gcgcgatgaa ctgatgccgc
     8281 aggtgcgcca gcgctacccg accaccgacg agcgcgcgct gatcggcgag tcgctggctg
     8341 gcctgttcgt ggtcgagacg ctgctgcagg aaccgacgct gttcaacagc tacatcgcgc
     8401 tggaccccag cctgtggtgg aaccagggaa cgatgctggc gggtgcagcc aagcagctgc
     8461 cggcagtgac gcgtgcgcag ccgcgcgtgt tcctggccag cagcgggcag ccggagctgg
     8521 cagcctctgc cgcgcagctg gcaacgctgc tggagcagcc ctcgccgtcg ccgctggtga
     8581 agtacctgcc actgccggag gaaacccacg ccacgatcta tcatccggcc gcattgcagg
     8641 cgctgcgcac gctgttcccg gcaccgccgc cggtctcgcc ctgaccgcac tggcaccgcg
     8701 tcgcacgcca tgcaaggatg cggcagcggc gccatccggt acgccgcccg caatgggagc
     8761 gtgtggatgc agcgtgtgcg tggatggagt gtggcggcct gcctggccgt gagtggctgt
     8821 gcgatgtcgg tggcaccgcc ggcaacgcag agtgaagcga aggaaagcgc ggccaccgct
     8881 gcgccgggtg tggtgctgcc ggataccgaa gcgctgcgcg tgcacgatcc ggtcggccgc
     8941 gattatccgg tctgggtagc gttgccggcc gattacgccg cgcatccgga gaagcactac
     9001 ccggtgctgt acgtgaccga cgcgctgtac agcttcccgc tggtgcgcag cgtgcgcaac
     9061 atggtggggc agaagggcgt caacatcgag gatttcatcc tggtcgggct gccgccgcag
     9121 gaaggcctga cctcgaagca gagccgctcg cgggactaca cgcccagcga tccggcgcgc
     9181 accgatccgc gtgactacag tgatgacgtc agctatggcg gtgccgcgca ttaccgcgat
     9241 ttcctcgccg agcgcgtgct gccgatgatc gatgcgcgct accgtaccga tccggcacgg
     9301 cgcgcctatg cgggccattc ctacggcggc ctgttcggcg cttacgtgct gaccacgcgc
     9361 ccggacatgt tccgtaccta tatcctgtcc agcccgtcgc tgtggttcga caaccacctt
     9421 gtgccgcgcc tgcaggccga ggccaaggcg ccgactcagc cgaccacggt ggtgctgtcg
     9481 gtgggcagct ttgaaacggt caagccggaa ccgcgttatt tcacccgcaa cgatatgctg
     9541 cgccataacg ccgaattcgc agagcagctg cgcaacagcg ggcgatcgtt gaaggtggag
     9601 aacatggtga tcgacgacga ggaccacttc acggtctacc cggacatgat cacccgcgca
     9661 ctgctgaagg tgttcccggg tacagggccg tacagcagcg gttgatcggc ggttgcagcc
     9721 acgccgatga gacgcggatt cagtagatcc acgccatgcg tggatgaatg cctcaggccg
     9781 cctgtgcgtc cggtccggtc agcacgccca catcggcgtg cctgaagcac aggcggatgg
     9841 catcgagcag ttcgctcatg ttgtagggct tgggcaggaa atggatgccg tcgcgcagct
     9901 gtggcagcac gcggtgctgg tccatgcccg aagtgaccag gatcggcagg tacggataaa
     9961 ggtcgcgtac ctggttggcg gcttcaatcc cgctcacgcg gcccaggttg acgtcggtga
    10021 acagcaggtc gaaacgctca ccggcggcca gcaggcccaa cgcggcttcg gccgagctga
    10081 cgcccaccac gtggcaggcc tggctttcca gcgccagccg gctcagttcg cgggtttcct
    10141 ccgcgtcctc gatcagcagg acgcggggct caacgtggcg cttggacagc aacatgacgc
    10201 gacaactccg gacagcaacg gtgaaaaggc gcgcaagtat gcgcaagccg gtagtgatac
    10261 cggcgtgcac ggcaggctaa gtgggcgtta caggcgtgtc gggcggcgac gacgcctgtg
    10321 ccaggccagc gcggccaccg ccagcagggc cgtgccgatg cgcaggctgg tggcctgcca
    10381 gcccaatgcg atggcgtcat cgaggctgaa cacattccag gccaggttca tcgaaacgtg
    10441 cagtaccagg ccgcaccaca gggtgtcgcc gtcgaggtgg tcgagccagg cgaagatgaa
    10501 gccaccgaaa gcgatcaccg caccgatgaa cagcgcggtg ccaccgccct cgaaaccgcc
    10561 gaagccgagc cagtgcaccc agccgaacag cagcacctgc ggcagtgcga gcaggggcca
    10621 cgggccgcgc acgatcttca ccagcaggat gaaacccagg ccgcggaaca gcatctcttc
    10681 ggccacgggg aacagtaccg cgagcatcgc tgcgtccagg acggtcagtg cggtgttagg
    10741 tgtgcccagc agggccaggc cgagccagca gggcaggctg gccagcagca cgcacagcgg
    10801 tccgctccag ccgttgccgt gcagcccgag actggcgaac aggcccacgc cgcgggggcg
    10861 cagcagcgcg gccagcaaca gcgccagcag tacggccagt gcattgtcga gcaggctacc
    10921 gccatagggg atgggcagcg caggaatcgg tgcaccgatg gccgcggcga tatcgcgcag
    10981 gttcaggcca aggccaacgc ccagcagcgc cagcaacagg cgcaccaggt tgggcagacg
    11041 ggacagcgtg gtcatgcgcg cactccctgc gggacaaggc cgcagtgtcg ggccggccgc
    11101 ttccgccggc acgcgccgga agtccctgtg ccatcggtca tgtgttgccg cacagtcatc
    11161 gcagggcagg tacagtcgat gccagaccga caggagcaat gcccatgctg tgccccgtat
    11221 gcacgaccca gaccctgcag atggccgaac gccatggcat cgagatcgac tactgcccgg
    11281 gttgccgtgg cgtgtggctg gaccgtggcg agctggacaa gatcatcgag cgcgccggag
    11341 cggcggtgcc gccacctgca cctgcgcagc agcagccggc gtccacgccg ccgccggtga
    11401 tgcaccgtga cacccgccat ctcggccagc gctacgaaga caatcgtggc cagcagcatg
    11461 ggcacggcta caagaaaaag aagaaggaca gcttcctgtc cgaactgttc gatttctgag
    11521 cagt
//
LOCUS       DAOKIP010000127        11497 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.127,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000127 DAOKIP010000000
VERSION     DAOKIP010000127.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 11497)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11497)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11497
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.127"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(83..2383)
                     /locus_tag="QEL58_002738"
     CDS             complement(83..2383)
                     /locus_tag="QEL58_002738"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012512062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDS1677188.1"
                     /translation="MQTRHLTIAVAIALSAASAHAATVADAGANASTDAALSAQTLDT
                     VSVIGQGETRQVQRITAVDKQVLPPGTSGQKILDRLPGVSVQSNDAFGANEESQTISL
                     RGFDKSRLGYTLDGIPLGDNSYGNYNGLSIARAIIAENLAGAELSQGIGSLGVASTSN
                     LGGTIQYFSMDPSTEFGGRASVTVGDNNQRRGYLRVDTGDINGFSAYVSGVHQDQDMW
                     AAPHQNQTTRQFNAKAVWNVGDHRFGAFVATSRASQANYAYLSKDMLARGLGYDWNIY
                     APDWDRAVAAAYCAPGTFNASKCKFSGNVRSIDDAYYQSRALRDDNLYSVDADLRLGE
                     QGRLKLLAYHHDNRGQGHWWAPGQPSYPGTDKMLPISIRSTNYTINRDGLTAALSWTV
                     GIHELEAGLWFEQNDHNVSRNFYYISGPFLDDLYLKNPDRLLFNQDFDIRTRQFYVQD
                     RMRFLDQRLTVDVGIKSPNTRMRATANPGVETSIASGTLTAKESVLPQVGLGFKLNAN
                     NELFASYAENIAAFVGGGSGGPLQVSPESFAASAGLEPEKSKSLEAGFRTFGEKYQAS
                     IAAYNVKFDNRLLSLNPCSSIEVGTRPECVTRFINVGSVKSHGAELTFILKPIDGLQW
                     YNALSWNKTTYEDDYTSGGAIVPVAGKITVDTPQRMASSEISWNRDGFFASLRAKYTG
                     KRYYTYTNDQSVPGVTTFDAGAGYDFGPGFGLRNVRVSLNATNLTNKRYAGQLSSFAP
                     TDPNGTRYAIHASAPRQVFMTVAAEF"
     gene            complement(2533..3075)
                     /locus_tag="QEL58_002739"
     CDS             complement(2533..3075)
                     /locus_tag="QEL58_002739"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677189.1"
                     /translation="MKRSQPVPELLLLLSLLIAGSATAATPAASAEEADATWRLVERW
                     SSQLARSDLVVQLSPLAPANSRSEARIGRGDSATIDLAPFVVAGRIKGPSGQIHTDAS
                     GRIIKGVTLSLGGACISRKQMGRRFPNFSVLSVPSGHSLDESTVFGTVMSGIQIGFSF
                     SEHDRDCMTQLRFSWPGERF"
     gene            complement(3050..3418)
                     /locus_tag="QEL58_002740"
     CDS             complement(3050..3418)
                     /locus_tag="QEL58_002740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017162882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677190.1"
                     /translation="MAGYYFRIAAIAHEVGHALYFDGIALSTRSAFIQHFCTMEGKAV
                     LNNLTARSELLVTSLGYYDIGVAASNGASLIARADAGGEELDRQVGKLFCDNNVTSTT
                     GENYNDFYGRIYDEAIAARP"
     gene            complement(3878..4618)
                     /gene="phbB"
                     /locus_tag="QEL58_002741"
     CDS             complement(3878..4618)
                     /gene="phbB"
                     /locus_tag="QEL58_002741"
                     /EC_number="1.1.1.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006391443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetoacetyl-CoA reductase"
                     /protein_id="HDS1677191.1"
                     /translation="MTLRIAYVTSGMGSVGTAICQSLARSGHTVVAGCAPNSPRKANW
                     LREQREQGFDFIASEGNATDWTSTSTAFAKVRAEVGEVDVLVNNSGGSRDLLFRQMTV
                     EDWNAVIASNLNSLFNLTKQVVDGMATRGWGRIINIGSVSAHKGQIGQVNYATAKAAM
                     HGFSRALAAEVASRGVTVNTLSPGYIASQAISSFPPDVLDRLAASVPVRRLGRPEEVA
                     GLVAWLASDEASYVTGADYPVNGGLYMG"
     gene            complement(4643..5971)
                     /locus_tag="QEL58_002742"
     CDS             complement(4643..5971)
                     /locus_tag="QEL58_002742"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004085288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CitMHS family transporter"
                     /protein_id="HDS1677192.1"
                     /translation="MLSILGFGMVITFMYLIMSKRLSPLVALITIPIIFALLGGFGAN
                     IDEMMLEGIKKIAPTGVMLMFAILYFGVMIDAGLFDPLVRVILRFVKGDPMKIVLGTA
                     VLAMLISLDGDGSTTYMITVSAMLPLYQRLGMNALNMTCVTILAGGVMNLTPWGGPTA
                     RAATALHVDPADVFVPLIPSMVIACAGVLLLAWYLGLKERRRLGVVTLPKGGSWMDNS
                     VSDDSNPLPTVEDAEDIKRPKLLWVNLALTVALMTALIIGVLPMPVLFMVGFAIALVI
                     NYPNLAEQRRRVVNHAGNVLSVVSLIFAAGIFTGILNNTGMVEAMSHSFLAVIPESWG
                     PYLAVITAVASMPFTFFMSNDAFYFGVLPILSEAAGNYGITPVEMARASLAGQPVHLL
                     SPLVPSTYLLVGLAKVEFADHQKFTLKWAIAISMLLMVGSLLFGLYPLAA"
     gene            complement(6047..7183)
                     /locus_tag="QEL58_002743"
     CDS             complement(6047..7183)
                     /locus_tag="QEL58_002743"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005419189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin"
                     /protein_id="HDS1677193.1"
                     /translation="MMALAALSAPAFAEDDRPVTATLGGRLHLDFATFDNDNRGTPNK
                     DDTEIRRAWVDVSGKFFVVDYKLEADFSGDRVEAKDVYLARSFGKAGKLTVGQFKQYF
                     SLDDRTSSNYGSFLERGNAGTTLAPLYRLGASWQANPGDFTWAASVYSLESIDAWQVK
                     GRAAGGRVTWAPSPRDGDVLHLGLSLAREAYDTPGANGVPGLKIRPRPAGHLSDESRL
                     TLVDFSAGRDTDVNKWSLEYAQVRGPLSWQGEFSGATFDDGAQRGDVMAAYGMLSWFV
                     TGESRAYDRKTGRFARVKDIRHKAGAFEVALRYDQMWGAQHLDGAPDLRRGSTEAWTL
                     GGNWYLRDNLRFMLNVIESRNRDRLAGVTVDRTRAVTGRLQYDF"
     gene            7416..8105
                     /locus_tag="QEL58_002744"
     CDS             7416..8105
                     /locus_tag="QEL58_002744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008267961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDS1677194.1"
                     /translation="MRLLLVEDNPDLADAIIRRMRRSGHAVDWQADGLAAASVLRYQS
                     FDLVVLDIGLPKLDGLRVLAGMRERGDSTPVLMLTARDGIEDRVQALDVGADDYLGKP
                     FDFREFEARCRVLLRRARGQASEVVQIGGFQFDNAAHRVSLDGEPIELPNREYRLLEI
                     LVGRLGQVVGKDEIGNGLFGFDDEAGPNAIELYVGRLRKKLAGAPLRITTVRGVGYLL
                     EASDGSADTDG"
     gene            8098..9489
                     /locus_tag="QEL58_002745"
     CDS             8098..9489
                     /locus_tag="QEL58_002745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014038432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HDS1677195.1"
                     /translation="MVDARAANAAPGSLRRTLLLYLGALLAVFAVALLFAARDYGQRA
                     ANRSYDHLLVSSALSIADSVALVDGQWQVDLPYAALDLLAMAPEDRVFYRVADNRGNL
                     ITGYGDLPAPPRRPGTQPQLFDAPYSGETVRFVVVGRSFAAASAQGEVQVQVGQTRRA
                     REAVAQDMVNRALLAIGVLSGLLLALVAFGVHRAFRPLVRVERELSRREPSDLKPLDA
                     RVPREMDQMVAALNRFMERLSSSNETLRAFMAEAAHQMRTPLAALRAQAQLALDDDDP
                     EDMRRSLQAIERNATHMSRLLNQLLSDASVIHRSHLQRFAAVDLAETVHQALHEALPQ
                     AGPAPRVQLAMTAEPVLVHGDALLLREAIKNLVDNALKYGGDGSLQIALTVEGGQAVL
                     TIADHGAGIAPADAERVFERFARGEGAPSGGAGLGLAIVKRVVDSHGGRIDLSNRPQG
                     GLVATIRLPRSSS"
     gene            9486..10541
                     /locus_tag="QEL58_002746"
     CDS             9486..10541
                     /locus_tag="QEL58_002746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019662065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDS1677196.1"
                     /translation="MIRLFATAIALLLTLPVLAAPGDVRRFPAQGNATAQLRIHGTTD
                     IEVFAVVIADYQRLHPGTEVVYEDIITQDLYARYLHDRAGPASPDLLISSGMDLQTKL
                     VNDGHALPHRSAQTAALPTWAQWRNEAFGISYEPVVMVYNTRTLPAAKVPHTRRQLLD
                     RLRAEGAPLRGKVGTYDIERSSVGYLLATQDAQRGSIAGALLGALGDNDVVREERTGV
                     LLDKVASGQLSLVYNVLGSYAQARIDAGAPLAIVEPEDYTLVVLRTAVIPRTGPHPEE
                     ARRFLDYLLSPRGQQVLSREARLMPIVTGNARSDDAPGRSRRPIQLGPGLLVYLDALK
                     RRQFLDAWRSSVEPAGR"
     gene            10570..11220
                     /locus_tag="QEL58_002747"
     CDS             10570..11220
                     /locus_tag="QEL58_002747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDS1677197.1"
                     /translation="MSEYTILIADDHPLLRSAVVQSLRQSLPLAQVREVASAEALAEA
                     LDAHPDVDLVLLDLTMPGAHGFSALLHVRGSHPDIPVVILSSNDHPRVIRRAQQFGAA
                     GFIPKSAPAETIGEAVQAVLDGGLWFPAMAAERSEADALLASRLAQLTPQQFRVLLCL
                     ADGLLNKQIAYTLGLAENTVKVHVTAILKKLECHSRTQAAVLVKALEPEGDAGAGL"
BASE COUNT         1895 a         3690 c         3949 g         1963 t
ORIGIN      
        1 gggtttacgg cgtgtcctgc gccggcccat ccggccctgc cccgcgatga caatcaagac
       61 gccgcggggc aacgcttctg acttagaact ccgccgccac cgtcatgaac acctgacgcg
      121 gcgcgcttgc atggatcgca taacgcgtgc cgttcggatc ggtcggtgcg aacgagctca
      181 gctggccggc atagcgcttg ttggtcaggt tggtcgcgtt caacgacacc cgcacgttgc
      241 gcaggccgaa gcccgggccg aagtcgtagc ctgcaccggc gtcgaaggtg gtcacgcccg
      301 gcaccgactg gtcattggtg taggtgtagt agcgcttgcc ggtgtacttg gcgcgcaggc
      361 tggcgaagaa gccatcacgg ttccagctga tttcactgga ggccatgcgc tgcggcgtgt
      421 ccacggtgat cttgccggcc accggcacga tcgcaccacc cgaggtgtag tcatcctcgt
      481 aggtggtctt gttccaggac agcgcgttgt accactgcag gccgtcgatc ggcttgagga
      541 tgaaggtcag ctccgcgcca tggctcttca ccgaaccgac gttgatgaag cgcgtcacgc
      601 actccggacg cgtgcccacc tcgatgctcg agcacgggtt cagcgacagc aggcggttgt
      661 cgaacttcac gttgtaggcg gcgatggacg cctggtactt ctcgccgaag gtacggaagc
      721 cggcttccag gctcttggat ttttccggct ccagcccggc gctggccgcg aacgattccg
      781 gcgagacctg cagcgggccg ccgctgccac cgccgacgaa ggcggcgatg ttctcggcgt
      841 acgaagcgaa cagctcgttg ttggcgttga gcttgaagcc caggccgacc tgcggcagca
      901 ccgattcctt ggcggtcagc gtgcccgagg cgatgctggt ctccacgccc gggttggcgg
      961 tggcgcgcat gcgggtgttc gggctcttga tgccgacgtc cacggtcagg cgctggtcca
     1021 ggaagcgcat gcggtcctgc acgtagaact ggcgcgtgcg gatgtcgaag tcctggttga
     1081 acagcaggcg gtccgggttc ttcaggtaca ggtcgtccag gaacgggccg ctgatgtagt
     1141 agaagttgcg cgagacgtta tggtcgttct gctcgaacca caggccggct tccagctcgt
     1201 ggatgcccac cgtccacgac agcgcggcgg tcaggccatc gcggttgatg gtgtagttgg
     1261 tgctgcggat cgagatcggc agcatcttgt cggtacccgg gtaggacggc tggcccggcg
     1321 cccaccagtg gccctggcca cggttgtcat gatggtaggc cagcagcttc aggcggccct
     1381 gctcgcccag gcgcaggtcg gcatccaccg agtacaggtt gtcgtcacgc agcgcacggc
     1441 tctgatagta ggcgtcgtcg atgctgcgga cattgccgct gaatttgcac ttcgaagcat
     1501 tgaaggtacc gggcgcgcaa tacgcggcgg ccacggcgcg atcccagtcc ggcgcgtaga
     1561 tgttccagtc atagcccagg ccgcgggcca gcatgtcctt ggacaggtag gcgtagttgg
     1621 cctggctggc acgcgaggtc gccacgaacg caccgaagcg gtggtcgccg acattccaga
     1681 ccgccttggc gttgaactgg cgcgtggtct ggttctggtg cggcgcggcc cacatgtcct
     1741 ggtcctggtg cacgccggac acgtaggccg agaagccgtt gatgtcgccg gtgtccacac
     1801 gcaggtaacc gcgacgctgg ttgttgtcac cgacggtgac gctggcgcgg ccgccgaatt
     1861 cggtggacgg gtccatcgag aaatactgga tggtgccacc caggttgctg gtcgaggcta
     1921 cgcccagcga accgatgccc tgcgacagtt cggcgccggc caggttctcg gcgatgatcg
     1981 cgcgggcgat gctcaggccg ttgtagttgc cgtagctgtt gtcgcccagc gggatgccgt
     2041 ccagtgtgta gccgaggcga ctcttgtcga aaccgcgcag gctgatcgtc tgcgattctt
     2101 cgttggcacc gaaggcatcg ttggactgca ccgacacgcc gggcaggcgg tcgaggatct
     2161 tctggccgct ggtacccggc ggcagcacct gcttgtcgac cgcggtgatg cgctgcacct
     2221 ggcgggtctc gccctggccg atcacggaga cggtatccag cgtctgcgcg ctcagtgcgg
     2281 catcggtgct ggcattggcg ccggcatcgg ccacggtggc ggcatgggcg ctggcggcgg
     2341 aaagcgcgat cgccacggcg atcgtcaggt gtcgggtctg catggtggtc cgttgcattg
     2401 ggggtggtca ccggcatgca tgcgcggtgc attggccact atgcgaacgg aacatgaaac
     2461 cttctttacg aaaaaccaac gaacggtgca cgcgcgtgat gcgtgtccag cactaccttc
     2521 gacaaggcgg gatcagaagc gctcgccggg ccagctgaac ctgagctggg tcatgcagtc
     2581 acggtcatgt tcggagaatg agaatccgat ctggattccg ctcatcacgg tgccgaacac
     2641 cgtcgactcg tccaggctat gtcctgatgg aacggataga acactgaagt tggggaagcg
     2701 gcgacccatc tgctttcgcg agatgcaggc gccgcccagc gagagcgtca cgcctttgat
     2761 gattcgcccg gaggcatcgg tatggatctg gccagaaggc cctttgatcc tcccggcgac
     2821 cacgaatggc gccagatcga tggttgcgct gtcgccccgg ccgattcttg cttccgaacg
     2881 cgagttggcc ggagccagtg gtgatagctg cacgacaagg tcagagcgcg ccagctgcga
     2941 ggaccagcgc tccacgagcc gccatgttgc gtccgcctcc tctgcactgg cggcgggcgt
     3001 ggctgctgtc gcagaaccgg caatcaacag gctcaggagc agaagaagtt cagggacggg
     3061 ctgcgatcgc ttcatcgtag atcctgccgt agaagtcgtt gtagttctcg ccggtggttg
     3121 aagttacgtt gttgtcgcag aacagctttc ccacctgccg gtccagttct tcaccgccag
     3181 catcggcccg cgcgatgagg ctggcgccgt tggacgccgc cacaccgatg tcgtagtacc
     3241 ccaggctggt taccagaagc tcgctgcgcg cggtgaggtt gttgagtacc gctttcccct
     3301 ccatggtgca gaagtgctgg atgaacgcac ttcgggtact caaggcgatg ccgtcgaagt
     3361 acagtgcgtg cccgacttca tgggcaatgg ctgcgatccg gaagtagtag cccgcaatgt
     3421 cggaggaatc gcagtcgaag gactggatgt agatccggat gggatcgcga ttggtatagg
     3481 acgcgggcgc ccaggagaag gtccactccg gatgcccggt gatctgtgca tcgagagtgg
     3541 gggcacctgg tatcagccag tcggggcagc ccagacccgt gatcacccgc atcggcgggg
     3601 gctccgcccg ggcctgtgtc gtcagcagcg tagtggcgac cacaagaagc gcaatcagca
     3661 atgcacgcat gccaacctcc ttgatccgcg attccagccg ttggtccatc aggctcagtg
     3721 agcgttggca ggtatagcat cggttctgcc gatgtatcgg gcagtgcgtc ccagaattgc
     3781 agaaacaaaa tggggccgga tccccctcgc acgcgaaggt tcaccggccc cgcgcactcc
     3841 gtgggggagg cagtccacgc gttgcgtgga agcgggctca ccccatgtac aggccgccgt
     3901 tgaccgggta gtcggcgccg gtcacgtacg aagcctcgtc tgacgcgagc caggccacca
     3961 ggcccgccac ttcctcgggg cggcccaagc ggcgcaccgg caccgacgcg gccagccggt
     4021 cgagtacatc cggtgggaag ctgctgattg cctggctggc gatgtagccc ggcgacagcg
     4081 tattgacggt gaccccgcgc gaggccactt cggcggccag tgcacggctg aagccatgca
     4141 tcgcagcctt ggccgttgcg tagttaacct gcccgatctg gcccttgtgc gcactcaccg
     4201 agccgatgtt gatgatgcgg ccccagccac gcgtggccat gccgtcgacc acctgcttgg
     4261 tcaggttgaa cagtgaattg aggttggagg cgatcaccgc gttccagtct tccaccgtca
     4321 tctgccggaa cagcaggtcg cggctgccgc cggagttgtt gaccagcacg tccacttcac
     4381 cgacttcggc gcgcaccttg gcgaacgccg tgctggtcga ggtccagtcg gtggcgttgc
     4441 cttcggacgc gatgaagtcg aaaccctgtt cgcgctgttc gcgcagccag ttggccttgc
     4501 gcggcgaatt cggcgcgcaa ccggcgacca cggtgtggcc gctgcgagcc aggctctggc
     4561 agatggcagt accgacactg cccatgccgc tggtgacgta agcgattcga agcgtcattg
     4621 cagaaggctc cttggtaagg ggtcaggcgg cgagcggata caggccgaac agcaggctgc
     4681 cgaccatcag cagcatcgag atggcgatgg cccacttcag ggtgaacttc tggtggtcgg
     4741 cgaactcgac cttggccagg cccaccagca ggtaggtgga cggcaccagc gggctgagca
     4801 gatgcaccgg ctggccagcc agagacgcgc gcgccatttc caccggggtg atgccgtagt
     4861 tgccggcggc ctcggacagg atcggcagca cgccgaagta gaacgcgtcg ttggacatga
     4921 agaaggtgaa cggcatcgac gccaccgcgg tgatcaccgc caggtacggc ccccacgact
     4981 ccggaatcac cgccaggaag ctgtgcgaca tcgcttcgac catgccggtg ttgttgagga
     5041 tgccggtgaa gatgccagcg gcgaagatca gcgagaccac cgacagcacg ttgccggcgt
     5101 ggttgaccac gcggcggcgc tgttcggcca ggttcgggta gttgatcacc agtgcgatgg
     5161 cgaagccgac catgaacagt accggcatcg gcagtacgcc gatgatcagt gcggtcatca
     5221 gcgccacggt cagcgccagg ttcacccaca gcagcttcgg gcgcttgatg tcttcggcgt
     5281 cttccacggt cggcagcggg ttgctgtcgt cggacacgct gttgtccatc cagctgccgc
     5341 ccttgggcag ggtcaccacg cccagccggc ggcgttcctt caggcccagg taccaggcca
     5401 gcagcagcac gccggcacag gcgatcacca tcgacgggat cagcggcacg aatacatcgg
     5461 ccgggtccac atgcagcgcg gtggccgcgc gtgcggtcgg cccgccccac ggggtcaggt
     5521 tcatcacgcc gccggcaagg atggtcacgc aggtcatgtt cagcgcgttc atgcccagcc
     5581 gctggtacag cggcagcatc gccgagacgg tgatcatgta ggtggtcgag ccgtcgccat
     5641 cgagcgagat cagcatcgcc agcaccgcgg tgccgagcac gatcttcatc ggatcgccct
     5701 tgacgaagcg caggatcacc cgcaccagcg gatcgaacag gccggcatcg atcatcacgc
     5761 cgaagtagag gatggcgaac atcagcatca cgccggtcgg cgcgatcttc ttgatgcctt
     5821 ccagcatcat ttcgtcgatg ttggcgccga agccgcccaa cagggcgaag atgatcggga
     5881 tggtgatcag ggcgaccagc ggcgacagtc gtttgctcat gatcaggtac atgaacgtaa
     5941 tgaccatgcc aaagccgagg atgctcagca tcatctgcgg actccttgcg aaaacaggac
     6001 gtgggggagt ggaagcggcc cgggcggcat gcccgggatg ccgggcttag aagtcgtact
     6061 gcaggcggcc ggtgaccgcg cgcgtgcggt ccaccgtgac cccggccagg cggtcgcggt
     6121 tgcggctttc gatcacgttg agcatgaagc gcaggttgtc gcgcaggtac cagttgccgc
     6181 ccagtgtcca cgcttcggtg ctgccacggc gcaggtcggg cgccccatcg aggtgctgcg
     6241 cgccccacat ctggtcgtag cgcagcgcca cctcgaaggc accggccttg tggcggatgt
     6301 ccttgacccg cgcgaagcgg ccggtcttgc ggtcgtaggc gcggctttcg ccagtgacga
     6361 accagctgag catgccgtag gcggccatca catcgccgcg ctgggctccg tcatcgaagg
     6421 tggcaccgct gaactcgccc tgccacgaca gcgggccgcg gacctgcgcg tattccagcg
     6481 accacttgtt gacgtcggta tcgcggccgg cggagaagtc gaccagggtc aggcggctct
     6541 cgtcggacag atggccggcc gggcgcgggc ggatcttcaa gcccggaacg ccgttcgcac
     6601 ccggggtgtc ataggcttcg cgggccagcg acaggcccag gtgcagcacg tcaccgtcgc
     6661 ggggcgaggg tgcccaggtg acccggccac cggcggcgcg gcccttcacc tgccaggcat
     6721 cgatgctctc caggctgtag acactggcgg cccaggtgaa atcacccgga ttggcctgcc
     6781 acgacgcgcc cagccggtac agcggtgcca gcgtggtgcc ggcgttgccg cgctccagga
     6841 agctgccgta gttggaactg gtgcggtcat ccagcgagaa gtactgcttg aactggccga
     6901 cggtcagctt gccggccttg ccgaagctgc gtgccaggta cacgtccttg gcctcgacgc
     6961 ggtcgccgga gaagtcggct tccagcttgt agtcgaccac gaagaacttg ccggacacat
     7021 cgacccaggc gcggcggatc tcggtgtcgt ccttgttcgg cgtaccgcgg ttgtcgttgt
     7081 cgaaggtggc gaagtccagg tgcaggcggc caccgagggt ggcggtgacc ggacggtcgt
     7141 cttcggcgaa ggccggcgcc gacagggcag ccagagccat catggcggca ggacgccgcc
     7201 aggcaaacgt gaattccaca aaccctccca ggtgcgcgcc aggcgcgcgg caatcgtggg
     7261 caccggacgg tgcgcggccg cagtctgggt cgccgtagct gtcatcgtcc tgtcaacggt
     7321 ttgtgcgctg cagcgtaaat ggtcgccagg cagggcgcgg cgggtgcatc ctgcgccatg
     7381 cggtagcatt cgtttcccct cccacccgtg tgcccatgcg cctgctgctg gtcgaagaca
     7441 acccggatct ggccgatgcg atcatccgtc gcatgcgtcg tagcggccac gccgtggact
     7501 ggcaggccga cggcctggcc gcggccagcg tgctgcgcta ccagagcttc gacctggtgg
     7561 tgctggatat cggcctgccc aagctggatg gcctgcgcgt gctggccggc atgcgcgagc
     7621 gcggcgacag cacgccggtg ctgatgctga ccgcgcgcga cggcatcgaa gaccgcgtgc
     7681 aggcgctgga tgtgggggcc gacgattacc tgggcaagcc gttcgatttc cgcgagttcg
     7741 aagcgcgttg ccgtgtgctg ctgcgacgcg cacgaggcca ggccagtgaa gtggtgcaga
     7801 ttggcggttt ccagttcgac aacgccgcgc accgggtcag cctcgacggt gagccgatcg
     7861 aactgccgaa ccgcgagtac cggctgctgg agatcctagt cggccgcctt ggccaggtag
     7921 tgggcaagga cgagatcggc aatgggctgt tcggtttcga cgacgaggcc gggcccaatg
     7981 ccatcgagct gtatgtcggg cgcctgagaa agaagcttgc tggcgctccg ttgcgcatca
     8041 ctaccgtgcg cggcgtcggc tatctgctgg aagccagtga cggcagtgcc gacaccgatg
     8101 gttgacgcgc gcgctgcgaa cgccgcaccg ggttcgctgc ggcgtacgct gctgctctac
     8161 ctcggtgcgt tgctggcggt gttcgcggtg gcgctgctgt tcgccgcgcg cgactacggc
     8221 caacgtgccg ccaaccggtc ctacgatcac ctgctggtgt cttcggcact gtccatcgcc
     8281 gattcggtgg cgctggtcga tggtcaatgg caggtcgatc tgccctatgc ggcgctggac
     8341 ctgctggcga tggcgccgga agaccgcgtg ttctacaggg tggccgacaa ccgcggcaac
     8401 ctgatcaccg gctacggcga cctgccggcg ccgccgcgcc ggcccggcac gcagccgcag
     8461 ctgttcgatg ctccctacag cggcgagact gtgcgtttcg tggtggtcgg ccgcagcttc
     8521 gcggcggcct cggcgcaggg cgaagtgcag gtacaggtgg gccagacccg gcgcgcgcgc
     8581 gaagctgtcg cacaggacat ggtcaatcgc gcgctgctgg caatcggcgt gctgtccggg
     8641 ctgctgctgg cgctggtggc cttcggcgtg catcgggcgt tccggccgct ggtgcgggtg
     8701 gagcgcgagc tgtcgcgtcg cgaaccctcc gacctgaagc cattggacgc acgcgtgccg
     8761 cgcgagatgg accagatggt ggccgcgttg aaccgcttca tggaacgcct gtccagcagc
     8821 aacgagaccc tgcgagcgtt catggccgag gccgcgcacc agatgcgcac gccgctggcc
     8881 gccctgcgcg cgcaggcaca gctggcgctg gatgacgacg acccggagga catgcggcgc
     8941 agcctgcagg cgatcgagcg caatgccacg catatgagcc gcctgctcaa ccagctgctc
     9001 agcgatgcca gcgtgatcca ccgttcccac ctgcagcgct ttgctgcggt ggacctggcc
     9061 gagaccgtgc accaggccct gcatgaagcc ctgccgcagg cgggcccggc accgcgcgta
     9121 cagctggcga tgaccgctga acccgtgctg gtgcacgggg atgcattgct gctgcgcgag
     9181 gcgatcaaga acctggtcga caacgcgctg aagtatggcg gcgatggttc attgcagatc
     9241 gcgttgaccg tggagggcgg gcaggcggtg ctgaccattg ccgatcacgg tgcaggcatc
     9301 gcgcccgccg atgccgaacg cgtgttcgag cgcttcgcgc gcggcgaagg cgcgccgtca
     9361 ggcggcgccg ggcttggcct ggccatcgtc aagcgggtgg tcgacagcca cggtggccgc
     9421 atcgacctca gcaaccgccc gcagggtggg ctggtcgcta ccatccgcct gccccggagc
     9481 agttcatgat ccgtctgttc gccacggcca tcgccctgct gctgaccctg ccggtgctgg
     9541 ccgcgccggg cgacgtgcgt cgtttccctg cgcagggaaa tgccaccgct cagctgcgca
     9601 tccacggcac caccgacatc gaagtgttcg cggtggtcat cgccgattac cagcgcctgc
     9661 atcccggcac cgaggtggtg tacgaggaca tcatcaccca ggacctgtac gcgcgttacc
     9721 tgcacgaccg tgccgggcca gcgtctccgg acctgctgat ttccagcggc atggacctgc
     9781 agaccaagct ggtcaacgat ggccatgcgc tgccgcaccg ctcggcgcag accgctgcgc
     9841 ttccgacgtg ggcgcagtgg cgcaacgagg cgttcgggat cagctacgaa ccggtggtga
     9901 tggtctacaa cacgcgcacg ctgccggccg cgaaggtgcc gcatacgcgc cgccagctgt
     9961 tggaccggct gcgtgccgaa ggtgcgccgc tgcgcggcaa ggtcggcacc tatgacatcg
    10021 agcgcagcag cgtcggctat ctgctggcca cccaggacgc acagcgcggc agcatcgcag
    10081 gtgccttgct gggcgctctc ggcgacaacg acgtagtgcg tgaggaacgc accggcgtgc
    10141 tgctggacaa ggtggccagc ggccagctgt cgctggtcta caacgtgctc ggctcctacg
    10201 cgcaggcgcg catcgatgca ggcgcgccgc tggccattgt cgagcccgag gactacacgc
    10261 tggtggtgct gcgtaccgcg gtgattccgc gcaccggccc gcaccctgaa gaagcgcggc
    10321 gcttcctcga ctacctgctg tcgccgcgtg gccagcaggt gctctcgcgc gaggcacggc
    10381 tgatgccgat cgtgaccggc aatgcgcgca gcgatgacgc gccgggacgc agccgccgcc
    10441 cgatccagct cggccccggc ctgctggtgt acctggatgc gctcaagcgc cgccagttcc
    10501 tcgacgcgtg gcgcagcagc gtcgagccgg cagggcgctg acgcggcggc ctgcccgtac
    10561 aatggcggca tgagcgaata caccatcctg atcgccgacg accacccgct gctgcgttcg
    10621 gcggtggtgc agtcattgcg gcagagcctg ccgctggcac aggtacgcga ggtggccagt
    10681 gccgaggccc tggccgaagc cctcgacgcg cacccggatg tggacctggt gctgctcgac
    10741 ctgaccatgc ccggcgcaca cggtttctcc gcgctgctgc acgtacgcgg ctcgcatccg
    10801 gatattccgg tggtgatcct ctcgtccaac gaccatccgc gggtgatccg ccgcgcgcag
    10861 cagttcggtg ctgccggttt catcccgaag tcggccccgg ccgagaccat cggcgaggcg
    10921 gtgcaggccg tgctcgacgg cggcctgtgg ttcccggcga tggccgccga gcgctccgag
    10981 gccgacgcgc tgctggccag ccgcctggcc cagctgaccc cgcagcagtt ccgcgtgctg
    11041 ctgtgcctgg ccgatggcct gctcaacaag cagatcgcct acacgctggg gctggccgag
    11101 aacacggtga aggtgcacgt caccgcgatt ctgaaaaaac tcgaatgcca cagccgcacg
    11161 caggcagcgg tgctggtgaa ggcgctggaa ccggaaggcg acgccggcgc cgggctgtag
    11221 tttccagcca acggcgcagc ccctcgtggg tggtgtttgg gttggtcgct gaaagccgaa
    11281 gccgcgagtg gaccggtcgg gtcgggtgcg cgggggacgc cgtgaatccg tccctggagg
    11341 cttggccgcg gcatccatgc ggctgacacc cccgcgcacc caacccgacc ggcctctgac
    11401 agatttcggt ggcctgcacc cacggaaaag aaaaagaaga tcaaaagcgg gtcgcgcgct
    11461 gcgcttgctc gtgtagagcc gagcgtgggc tcggctc
//
LOCUS       DAOKIP010000128        11370 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.128,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000128 DAOKIP010000000
VERSION     DAOKIP010000128.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 11370)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11370)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11370
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.128"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..772)
                     /locus_tag="QEL58_002748"
     CDS             complement(<1..772)
                     /locus_tag="QEL58_002748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar brake protein"
                     /protein_id="HDS1677198.1"
                     /translation="MSDGNDTAVHDVHAADAADERFLVRNPRQLRQLLRSLIDQRSLI
                     NAHIDGRDRSFPTALLDLDEDEDYLLLDGSPQEASNRAAEQADHLLCFAQLERVLVRF
                     RLHELQRVDNEGHVAFRAPLPDELVHLQRRELYRLETPVTDSPQLLLPPGEARAEALS
                     MRVVDISGGGLAVVVPNDCAVFGLQKRYPARLSLPDGPDLDIELVVCNLLPQRQPNGI
                     EVKRVGMRFDTLPRGADSAIQRYIFRIDRQRKARRNGEM"
     gene            complement(976..3225)
                     /locus_tag="QEL58_002749"
     CDS             complement(976..3225)
                     /locus_tag="QEL58_002749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017155256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MCP four helix bundle domain-containing protein"
                     /protein_id="HDS1677199.1"
                     /translation="MKWFQDLPIARKLAVGFTLTTLMTLVLGAFALLRLSEANTQLGE
                     MAGNDIPSVQHLGEARSQLGEFRTYELALLSMLDQPDKVADYNKRMDDTAKTVRGELA
                     AYAALPALARERELYQTANVQLERYFGANKAMREAVAAGDGALAQQISDEQSRPARRE
                     LFAAMKALGTHIAGLMDAKIAAANATHRTSMIAIIGCIVLLSLVAAALATVISRAVTG
                     PLGKAVHAIQAVARGDLSVSTQATSKDEAGKMLAATAEMTAMLRRFSEQTQLMAQMHA
                     GPDISHRIPEDFPGVYGQLAGGINTVIFEHLDAIRDAIDVLNQYAIGNLAPDARRLPG
                     SRAILHESMDAAKASLLAINTQIQQLAEAAAAGDFSQRGDAQRFQHDFKLMIEHLNTM
                     MQVADGNLGQLSQLLQSIAAGDLTARMDGQFNGVFARMRDDANTTVAQLTQIVGQIQA
                     SASSITLAAGEIASGNSDLSRRTEQQAANLEETAASMEELTSTVRQNAEHARQANQLA
                     IGAHGVASQGGEVVGQVVTTMSAIEASSKKIAEIISVIDGIAFQTNILALNAAVEAAR
                     AGEQGRGFAVVASEVRTLAQRSAAAAKEIKGLIDDSVGKVAEGSSLVHQAGSTMGEIV
                     ASVQRVTDIMAEISAASQEQSAGIEQVNQTVVQMDETTQQNAALVEEATAAARAMEDQ
                     AVQLGEAVARFRLASQATPGTAPRLATAPLPRQVAAAAPAHRPTPARALRGSSAQPAL
                     AADGDWQEF"
     gene            complement(3566..5557)
                     /locus_tag="QEL58_002750"
     CDS             complement(3566..5557)
                     /locus_tag="QEL58_002750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008577777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheA"
                     /protein_id="HDS1677200.1"
                     /translation="MSMDLQRFHATFFEESREGLDAMEAGLLALESGQQDAEIINSVF
                     RAAHSIKGGAGTFGFDAIAGLTHVLETLLDELRAGKRALEGHAVDAMLSSVDVLRALL
                     REAEHGQAADPAAVAAVKARLEAVLSGQAAPSAPAAAAAKVDDTPEAWQIGFTPAPSL
                     FMSGNDPLRIIRELEHLGSLQVAARIERLPGFAQLDPLEAHLAWDLGLVGKVPRSKIE
                     DTFAWVLDDCELDIRPAAPPSLATQAPAASAPSTPAPATPAAPAAPAASGGAPQEAET
                     SIRVSVDKVDALINLVGELVITQAMLKQVSHALDPVHAESLFAGLDQLERNTRDLQEA
                     VIGVRMLPVDAVFRRFPRLVRDLSSRLGKQVRLRTVGEGTELDKGLIEKIADPLVHLV
                     RNSIDHGLEMPDVRRGAGKDETGTITLAASHQGGHIVIEVSDDGRGLDRAKILAKAHE
                     RGLAVPDNPTDSQVWDLIFQPGFSTADAVTDLSGRGVGMDVVRRNIQALGGEVQIESS
                     LGAGTRTLIRLPLTLAILDGMTVAVAGETLILPLAYVLEALQPQAEDIRSMAGEGRVL
                     RVRGEYLPILSLSEYYGYGNRAPGSESLVVVVEGDGQKIALEVDELVGQQQVVVKNIE
                     NNYRRIGGVSGATILGDGRVALIVDIGGLVRSLRMPQAA"
     gene            complement(5603..5968)
                     /locus_tag="QEL58_002751"
     CDS             complement(5603..5968)
                     /locus_tag="QEL58_002751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002806565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HDS1677201.1"
                     /translation="MSARILVVDDSASMRQMVSFALTSAGFAVEEAEDGAVALGRAKG
                     QRFNAVVTDVNMPNMDGIALIRELRQLPDYKFTPLLMLTTESAADKKSEGKAAGATGW
                     LVKPFNPEQLVATVQKVLG"
     gene            complement(5965..6273)
                     /locus_tag="QEL58_002752"
     CDS             complement(5965..6273)
                     /locus_tag="QEL58_002752"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019302363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="STAS domain-containing protein"
                     /protein_id="HDS1677202.1"
                     /translation="MSTVELGEDLGIESSTELKNRLAPLVAQAGELTLDASQVARIHT
                     AAIQVLCAFVQARREAGLGTGFHGCTATFRDAARLLGVTQALGLDATHDNLKSVENAA
                     "
     gene            complement(6355..7572)
                     /locus_tag="QEL58_002753"
     CDS             complement(6355..7572)
                     /locus_tag="QEL58_002753"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005413242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheW"
                     /protein_id="HDS1677203.1"
                     /translation="MNSTGVLDDYLDELLGEAIVAAPLAAPPASAGPSEAATEREPTW
                     DDLPAEVIYETESATTAPCTDNAALEAAFEAAATIEREPTWDDLQAEVIYETDTVAAA
                     PAADDAALEAAFEAAATPAAIEGEPTWDDLPDEVLHETAPAPATAGTGPEPTWDDLPD
                     EVIYETDTADSHRLAHTDSPGLQAAFEAAAGGEDVATPAPAVVAAPVPPAAPRAAAAP
                     TARTAAVPPPRVAVDAPAASRPSSWQELQAQAHHPASSPHPQNRRAGERTSRWLRLRC
                     GTQAYALELLKVQEVVLPVPLLPLRGTAPAMLGIMNLRGQVVPVMDLGLHLGAAAAED
                     DAQTRIVVLEEDGETIGLRVSAVEDVANLTDSQIEPPDTARICQISNDLFRGVARVSQ
                     RPMILLDATQLLS"
     gene            complement(7569..8351)
                     /locus_tag="QEL58_002754"
     CDS             complement(7569..8351)
                     /locus_tag="QEL58_002754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014503257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HDS1677204.1"
                     /translation="MRIWAVANQKGGVGKTTTTLALGRGLAALGHRVLLIDLDPHASL
                     SRAFGVPVDPPPAGVLELFGAPPADLSNLCHASSIHGLDYVCAQSALATLERRSANQP
                     GLGLALQNALARHQAQHDYILLDCAPTLGLLMINALAAADRLIIPTQAEPLALHGLDG
                     MVRTGEMVERSRRRPLPISILPTLFDRRTRAGNESLRTMQDRHGARVWEDAIPIDTRI
                     SNAAGLTLPSVGEDYPGRGLAAYRRALNWILGEDARALEQAA"
     gene            complement(8356..9372)
                     /gene="motD"
                     /locus_tag="QEL58_002755"
     CDS             complement(8356..9372)
                     /gene="motD"
                     /locus_tag="QEL58_002755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor protein MotD"
                     /protein_id="HDS1677205.1"
                     /translation="MARRKHHEEHANHEAWAIPYADLMTLLLAFFVVMYAISSVNEGK
                     YRIMADALTDAFGGAPRTINPVQVGNKQVQGGGWDSPSVIKSGTKIGPSAPAPSHDPT
                     LLPSMASQMRMPVSVHNQEQIARAERQLNSIADRLTAALAPLIDRGMISVRRTELWIE
                     VEINSDILFPTGSAALDVHARQTLASLADVLRDVPNSVRVEGHTDNVPIATATFPSNW
                     ELSAGRAASVVHLFADQGVQPSRLAMVGYGQFRPREENDSAQGRNRNRRVMVIILADT
                     SHSVDPLGQRLNAATGAVDNSATEQAAATPATAPTSPIAPVKLPPVPAGSRVGAAVPP
                     AMKE"
     gene            complement(9374..10114)
                     /locus_tag="QEL58_002756"
     CDS             complement(9374..10114)
                     /locus_tag="QEL58_002756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002806574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor protein"
                     /protein_id="HDS1677206.1"
                     /translation="MDRLSLIGLFLALASLVGGSILKGAGLASLWSPAAFVIVIVGTI
                     AAILLHTSPAVFKHAFKIVRWVVRPPHSDRRELIQQIVEWSNIARRQGLLGLESQVEA
                     QQDPFLRKGLQLLVDGVEPESMRHMLEIELGSQEHQDQAGAKVFEAMGIYAPTLGIIG
                     AVLGLIAVMKNLADPSKLGHGIAAAFTATIYGIASANLLFLPIAAKLKSVISHNTRDR
                     EMVIEGLISIAQGENPRNIETNLSGFLH"
     gene            complement(10216..>11370)
                     /locus_tag="QEL58_002757"
     CDS             complement(10216..>11370)
                     /locus_tag="QEL58_002757"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheA"
                     /protein_id="HDS1677207.1"
                     /translation="KPLAEAEHTVRVDTKRLDAIVNLIGELVLSRNRLKTLRARLRDE
                     ELDRAVSTLDIATARLQSAVMRTRMQPVGKVFSRFPKVARDVARSLKKEVDLELIGAE
                     TELDRNLVEALADPLVHLVRNAIDHGVEMPDLREAQGKPRMGHVRLSAQQEGDYVSIE
                     VQDDGAGIDPEKLRAKAREKGLIDPEAAARLSSEECLHLVFLPGFSTKQQVTDISGRG
                     VGMDVVQSRIRELSGQIQIQSELGRGSRFLIRVPLTLAILPTLLVQAGEDVYALPLAR
                     VMEVLHAPRTSLGWFDGRAVLDRRSHTLPLVDLRQWLDVTPAASTLLTIVVLQAGEAR
                     FGLVVDQVRGREEVVIKPLPKALRGLRGYAGATLIGDGRMALILDVDGLR"
BASE COUNT         1648 a         3660 c         4110 g         1952 t
ORIGIN      
        1 acatctcgcc gttgcggcgg gccttgcgct ggcggtcgat acggaagatg tagcgctgga
       61 tggcgctgtc ggccccgcgc ggcagggtgt cgaagcgcat gcccacgcgc ttgacctcga
      121 tgccgttggg ctggcgctgc ggcagcaggt tgcagaccac cagttcgata tccaggtccg
      181 ggccatcagg cagtgacagc ctcgccggat agcgcttctg caggccgaac accgcgcagt
      241 cgttgggcac gaccacggcc aggccgccgc cactgatgtc caccacccgc atcgacaacg
      301 cttcggcgcg ggcttcgccg ggcggcagca gcagttgcgg cgaatcggta accggggttt
      361 ccagccggta cagctcgcgt cgctgcaggt gcaccagctc gtccggcagt ggtgcacgga
      421 acgcaacgtg gccttcgttg tccacgcgct gcagttcatg cagacggaac cgcaccagca
      481 cccgttcaag ctgggcgaag cacagcaggt ggtcggcctg ctcggcggcg cggttggacg
      541 cttcctgcgg gctgccatcg agcagcaggt agtcttcgtc ctcatcaaga tcaagcagcg
      601 ccgtcgggaa cgagcggtct cggccgtcga tatgcgcatt gatcagtgat cgctggtcga
      661 tcagcgagcg cagcaactgg cgcagctggc gcgggttgcg gaccaggaaa cgttcgtcgg
      721 cggcatcggc cgcgtggaca tcatgcactg cagtgtcgtt gccgtcggac atggaatcta
      781 cggtcagggg cgggcgccag cacgcgttgg cgcgaggctc gatggggata tcggcctctg
      841 catcggatta tgaagtgaga attacatcac tttccatgcg tgaggggtca gatccctttc
      901 ccggaggaaa ggaacctgac cccgatgtgc cacgcaggta gatccacgcc atgcgtggat
      961 gctttccgcg tggggtcaga actcctgcca gtcgccgtcg gcggccagtg ccggctgggc
     1021 gctcgagccg cgcagcgcac gtgcgggtgt cggcctgtgg gcgggagcgg cggccgctac
     1081 ctggcgcggc agcggtgcgg tggccaggcg cggcgcggtg cccggggtcg cctgcgatgc
     1141 cagccggaag cgggccacgg cttcccccag ctgcacggcc tggtcttcca tcgcgcgggc
     1201 ggcggcggtg gcttcttcca ccagcgcggc gttctgctgg gtggtctcgt ccatctgcac
     1261 cacggtctgg ttgacctgct cgatgccggc cgactgttcc tgcgaagcgg ccgagatctc
     1321 ggccatgatg tcggtcacgc gctgcaccga ggcgacgatc tcgcccatgg tgctgccggc
     1381 ctggtgcacc aggctggagc cctcggcaac cttgccgacc gagtcgtcga tcaggccctt
     1441 gatttccttg gcggcagcgg ccgagcgctg ggcgagggta cgcacttcgc tggcgaccac
     1501 ggcgaagcca cggccctgtt caccggcacg ggccgcttcc accgcggcgt tcagcgccag
     1561 gatgttggtc tggaacgcga tgccgtcgat gaccgagatg atctcggcga tcttcttcga
     1621 cgaggcttcg atggccgaca tggtggtgac cacctggccg accacctcgc caccctgcga
     1681 ggcgacgcca tgtgcgccga tggcgagctg gttggcctgg cgggcatgtt cggcgttctg
     1741 gcgcacggtg gaggtcagct cctccatcga ggcggcggtt tcttccaggt tggcggcctg
     1801 ctgctcggtg cggcgcgaca ggtcactgtt gcccgaggcg atctcaccgg cggccagggt
     1861 gatgctggag gcgctggcct ggatctggcc gacgatctgg gtcagctgcg cgacagtggt
     1921 attggcgtcg tcgcgcatgc gggcgaacac gccgttgaac tggccgtcca tgcgtgcggt
     1981 caggtcaccg gcggcgatcg actgcagcag ctgcgacagc tggccgaggt tgccgtcggc
     2041 cacctgcatc atggtgttga ggtgctcgat catcagcttg aagtcgtgct ggaaacgctg
     2101 ggcgtcgccg cgctggctga agtcaccggc ggcggcggcc tcggccagct gctggatctg
     2161 cgtgttgatc gccagcaggc tcgccttggc cgcgtccatc gattcgtgca ggatcgcgcg
     2221 gctgccgggc aggcggcgcg catccggggc cagattgccg atggcgtact ggttgagtac
     2281 gtcgatggca tcgcggatcg cgtccaggtg ttcgaagatc accgtgttga tgccgccggc
     2341 cagctggccg tagacacccg ggaagtcttc cgggatgcgg tggctgatgt ccgggccggc
     2401 atgcatctgc gccatcagct gggtctgctc gctgaagcgg cgcagcatgg cggtcatctc
     2461 ggcggtggcg gccagcatct tgccggcctc atccttgctg gtggcctggg tgctgacgct
     2521 gaggtcgccg cgggcgacgg cctggatcgc gtgcacggcc ttgccgagcg ggccggtgac
     2581 ggcgcgcgag atcaccgtgg ccagcgcggc cgcgaccagc gacagcagca cgatgcagcc
     2641 gatgatggcg atcatgctgg tgcggtgggt ggcgttggcg gcagcgatct tggcgtccat
     2701 caggccggcg atgtgggtgc cgagcgcctt catcgccgcg aacagttcac ggcgcgccgg
     2761 gcgcgactgt tcgtcggaga tctgctgcgc gagtgcgccg tcacctgcag ctacggcttc
     2821 gcgcatcgcc ttgttggcgc cgaagtagcg ctccagctgc acgttggcgg tctggtagag
     2881 ctcgcgctcc ctggccagcg ccggcaacgc cgcgtacgcg gccagctcgc cgcgtacggt
     2941 cttggcggtg tcgtccatgc gcttgttgta gtcggccacc ttgtccggct ggtcgagcat
     3001 gctcagcagc gccagttcgt aggtgcggaa ttcacccagc tgcgagcgcg cctcgcccag
     3061 gtgctggacc gacggaatat cgttgccggc catctcgccc agctgcgtgt tggcctcgct
     3121 gaggcgcaac agtgcgaagg cgccgaggac cagggtcatc aacgtggtga gggtgaaccc
     3181 cacggccagc ttgcgggcga tgggcagatc ttggaaccac ttcatgcagg gtgctccagg
     3241 tgggcagggt gccggcgcag tcgcggcggc tgggggtggt tgcagagcaa acggaggtgc
     3301 ccggtggggt tcggtgacgg ccgtcattgc gggataacgg cgcgggctgc gcggacttta
     3361 tggacgcata tcacattcgg ttgcgtaggg gcgcgggtgc gaaagtgctg ctgtgatggg
     3421 actttcgctt gcgtggcgta gttgcatgcg aaagcacggc gccgacggag ttcacagaag
     3481 ggatctgacc ccggggtgga atggggcgcg caaacaaaaa ccgccgcccc gaagggcggc
     3541 ggttctggac agcctgcaat gggaatcagg cggcctgcgg catccgcagc gaacgcacca
     3601 ggccgccgat atcgacgatg agggcgacgc ggccgtcgcc gaggatggtg gcaccggata
     3661 ccccgccgat gcggcggtag ttgttctcga tgttcttcac caccacctgc tgctggccga
     3721 ccagctcgtc cacttccagc gcgatcttct ggccatcgcc ctcgaccacc accaccagcg
     3781 attcgctgcc cggcgcacgg ttgccgtagc cgtagtactc gctgagcgac aggatcggca
     3841 ggtactcgcc gcgcacgcgc aacacgcggc cttcgccggc catgctgcgg atgtcctcgg
     3901 cctgcggctg cagggcttcc agcacatagg ccagtggcag gatcagggtt tcaccggcca
     3961 ccgccacggt catgccatcg aggatggcca gggtcagcgg caggcggatc agggtgcggg
     4021 taccggcgcc gaggctgctt tcaatctgca cctcgccgcc cagcgcctgg atgttgcggc
     4081 ggaccacgtc catgccgacg ccacgcccgg acagatcggt caccgcatcg gcggtggaga
     4141 agccgggctg gaagatcagg tcccagacct gcgaatcggt cgggttgtcc ggtacggcca
     4201 ggccacgctc gtgcgccttg gccaggatct tggcgcggtc caggccgcga ccatcgtcac
     4261 tgacttcgat gacgatgtgg ccgccctggt gcgaagcggc cagggtgatc gtgccggtct
     4321 cgtccttgcc tgcaccgcgg cgcacgtcgg gcatttccag gccgtggtcg atcgagttgc
     4381 gcaccaggtg caccagcgga tcggcgatct tctcgatcag gcccttgtcc agctcggtgc
     4441 cttcgccgac ggtgcgcagg cgcacctgct tgccgaggcg gctggacaga tcgcggacca
     4501 ggcgcgggaa gcggcggaac accgcatcga ccggcagcat gcgcacgccg atcacagctt
     4561 cctgcaggtc gcgcgtgttg cgttcaagct ggtccaggcc ggcgaacagg ctctcggcat
     4621 gcaccggatc gagcgcatgc gagacctgct tgagcatggc ctgggtgatg accagttcgc
     4681 cgaccaggtt gatcagcgca tcgaccttgt cgacgctgac ccggatcgag gtctcggctt
     4741 cctggggtgc gccgccgctg gctgcgggtg cagcgggtgc ggccggggtc gccggagccg
     4801 gtgtggaagg ggctgatgcg gccggtgcct gggtggccag gctcggcggc gccgccggac
     4861 ggatgtccag ttcgcagtcg tccagcaccc aggcgaaggt gtcttcgatc ttgctgcgcg
     4921 gcaccttgcc gaccaggccc aggtcccacg ccaggtgggc ctcgagcggg tcgagctggg
     4981 cgaagccggg caggcgctcg atgcgcgcgg cgacctgcag cgacccgagg tgttccagtt
     5041 cgcggatgat gcgcagcgga tcgttgccgc tcatgaacag cgacggtgcc ggggtgaagc
     5101 cgatctgcca ggcttccggc gtgtcgtcca ccttggcggc cgcggcggcc ggagcactcg
     5161 gcgcggcctg gccggagagc accgcttcga ggcgtgcctt caccgcggcg acggccgcgg
     5221 gatcggcggc ctggccgtgt tcggcttcgc gcaacagggc gcgcagcacg tccaccgagg
     5281 acagcatggc gtcgacggcg tggccttcca gtgcccgctt gccggcacgc agctcatcga
     5341 gcagcgtttc cagcacgtgg gtcaggccgg cgatcgcatc gaagccgaag gtgccggcgc
     5401 cgcccttgat cgagtgggcg gcgcggaaca ccgaattgat gatctccgcg tcctgctgcc
     5461 ccgattccag ggccagcagg ccagcctcca tcgcgtcgag gccttcgcgg ctctcctcga
     5521 agaaggtggc gtggaagcgt tgcaggtcca tgctcatggc agtggtggtc cggaagcgaa
     5581 gaaggggagc ggtgccgggc gatcagccca gcactttctg cacggtggcg accagctgtt
     5641 ccggattgaa cggcttgacc agccagccgg tggcaccggc ggccttgcct tcggacttct
     5701 tgtcggcggc cgactcggtg gtcagcatca gcagcggggt gaacttgtag tccggcagct
     5761 ggcgcagttc gcggatcagc gcgatgccgt ccatgttcgg catgttgacg tcggtgacca
     5821 ccgcattgaa gcgctggccc ttggcgcgac cgagcgcgac cgcgccgtct tcagcttctt
     5881 cgacggcaaa accggccgag gtgagggcga aggaaaccat ctggcgcatc gacgccgaat
     5941 cgtccaccac caagatacgt gcgctcatgc agcgttctcc acagatttca ggttgtcatg
     6001 ggttgcgtcc aggcccaggg cctgggtgac gcccagcagg cgcgcggcgt cacggaaggt
     6061 tgcagtgcaa ccgtggaagc cggtgcccag gcctgcctcg cggcgggcct gcacgaacgc
     6121 acacagcacc tgtatggcgg cggtgtggat gcgggcgacc tggcttgcat ccagggtcag
     6181 ctcgccggcc tgcgccacca gcggggcgag gcggttcttg agctcggtgc tgctctcgat
     6241 gccgagatcc tcacccagtt cgacagtgct catcgttgct ccggacaaac ggttccgtga
     6301 tccataacgg caccccggcg gggttcttta gaagaatcgg cgcgatgcgc cgactcagct
     6361 caacagttgc gtggcgtcga gcaggatcat cgggcgctgg ctgacccggg ccacgccgcg
     6421 gaacagatcg ttggagatct ggcagatgcg cgcggtatcg ggtggctcga tctgcgagtc
     6481 ggtgaggttg gcgacgtctt ccaccgccga cacgcgcagg ccgatggtct cgccgtcttc
     6541 ctccagcacc acgatgcggg tctgcgcgtc gtcctcggcg gcagcggcac cgaggtgcag
     6601 gccgaggtcc atcaccggca ccacctggcc gcgcaggttc atgatgccga gcatggccgg
     6661 tgcggtgccg cgcaacggca gcagcggcac cggcagcacc acttcctgca ccttcagcag
     6721 ctccagcgca taggcctggg tgccgcagcg caggcgcagc cagcgcgagg tgcgctcgcc
     6781 ggcgcggcgg ttctgcgggt gcggactgct ggccgggtgg tgcgcctgcg cctgcagttc
     6841 ctgccagctg ctggggcggc tggctgcggg ggcgtccacg gcgacccgcg gtggcggtac
     6901 ggctgcggtg cgtgcggtgg gtgcagcggc tgcccgcggt gctgccggtg gtaccggcgc
     6961 cgcaaccacg gccggcgccg gcgtggcgac gtcctcgcca cccgcggcgg cttcgaatgc
     7021 cgcctgcagg cccgggctgt cggtatgggc gaggcgatgg ctgtcagccg tatcggtctc
     7081 gtagatcact tcgtccggaa ggtcgtccca ggtgggttcc gggccggtgc ctgcggtggc
     7141 cggcgccggg gctgtctcgt gcagcacctc gtctggcagg tcatcccagg tcggctcgcc
     7201 ttcaatggcg gccggcgttg cggcggcctc gaatgcggcc tccagcgctg cgtcgtccgc
     7261 ggccggggca gcggccacgg tgtcggtttc gtagatcact tcagcctgca ggtcgtccca
     7321 ggtcggctcg cgctcgatcg tcgccgccgc ctcgaacgcg gcctcgagcg cggcgttgtc
     7381 ggtgcacggg gcagtggtcg cactttcggt ttcgtagatc acttcggccg gcaggtcatc
     7441 ccaggtcggc tcgcgctcgg tggccgcttc gctcggccca gcgcttgctg gcggcgcagc
     7501 gagtggcgcg gcgacaatgg cttcgcccag cagttcgtcc aggtagtcgt ccagtacgcc
     7561 ggtgctgttc atgcggcctg ctccagggcg cgtgcgtcct cgccgagaat ccagttcagg
     7621 gcgcggcgat acgcggccag gccgcggccc gggtagtcct caccgacgct gggcagggtg
     7681 aggccggcgg cattgctgat gcgcgtgtcg atcggaatcg cgtcttccca tacgcgcgca
     7741 ccatgacggt cctgcatggt gcgcagcgac tcgttgccgg cgcgggtacg gcggtcgaac
     7801 agggtgggca ggatcgagat cggcagcgga cggcggcgcg agcgctcgac catctcgccg
     7861 gtgcggacca tgccatccag gccgtgcagg gccagcggtt cggcctgggt cgggatgatc
     7921 aggcgatcgg cagccgccag cgcattgatc atcagcaggc cgagggtcgg cgcgcagtcc
     7981 agcaggatgt agtcgtgctg ggcctggtgg cgcgccagtg cattctgcag ggccagtccg
     8041 aggccgggct ggttggcgct gcgacgctcc agcgtggcca gtgccgactg cgcgcagacg
     8101 tagtccaggc cgtggatgct gctggcatgg cacaggttgg acaggtcggc cggtggtgcg
     8161 ccgaacagtt ccagcacgcc ggccggcggc ggatccaccg gcacgccgaa ggcgcggctg
     8221 agcgaggcat gcggatcgag gtcgatcagc agcacgcggt ggccgagcgc ggccaggccg
     8281 cggccgaggg cgagggtggt ggtggtcttg ccgactccgc ccttctggtt ggcgactgcc
     8341 cagatgcgca tcggtttact ccttcattgc cgggggaacg gcggcgccga cgcggctgcc
     8401 agccggcacc ggcggcaact tcaccggtgc gatgggggag gtgggggcgg tagccggagt
     8461 tgcggcggct tgttcggtgg cgctgttgtc gacggcgccg gtggcagcgt tcaggcgctg
     8521 cccgagcgga tcgaccgagt gcgaggtgtc tgccaggatg atgaccatca cccggcggtt
     8581 gcggttgcgg ccctgcgcgc tgtcgttctc ttcgcgcggg cggaactggc cgtagccgac
     8641 catcgccagt cgtgacggct gcacgccctg gtcggcgaac aggtgcacca cgctggccgc
     8701 gcgcccggcc gacagttccc agttggacgg gaaggtggcg gtggcgatcg gcacgttgtc
     8761 ggtgtggcct tccacgcgca cgctgttggg cacatcgcgc agcacgtcgg ccaggctggc
     8821 cagggtctgc cgtgcgtgca cgtccagcgc ggccgagccg gtggggaaca ggatgtcact
     8881 gttgatctcg acctcgatcc acagttcggt gcggcgcacg ctgatcatgc cgcggtcgat
     8941 cagtggcgcc agcgcggcgg tcaggcggtc ggcgatgctg ttgagctggc gctcggcgcg
     9001 cgcgatctgt tcctggttgt gcaccgatac cggcatgcgc atctgcgagg ccatcgatgg
     9061 cagcagcgtc gggtcatgcg acggggcggg tgcggatgga ccgatcttgg tgccggactt
     9121 gatcaccgac gggctgtccc agccgccgcc ctgcacctgc ttgttgccga cctgcaccgg
     9181 gttgatggtg cgcggcgcac cgccgaaggc atcggtgagc gcatcggcca tgatccggta
     9241 cttgccctcg ttgaccgagg aaatcgcata catgaccacg aagaaggcga gcagcagcgt
     9301 catcaggtcg gcatagggga tcgcccatgc ttcatggttg gcgtgctctt cgtggtgctt
     9361 gcggcgggcc atgtcagtgc aggaagccgg agaggttggt ttcgatgttg cgcgggttct
     9421 cgccctgcgc gatcgagatc aggccttcga tgaccatttc gcggtcgcgg gtattgtgcg
     9481 aaatcacact cttgagcttg gcggcgatcg gcaggaacag caggttggcc gaggcgatgc
     9541 cgtagatggt ggcggtgaac gcggcggcga tgccgtggcc gagcttgctc gggtcggcca
     9601 ggttcttcat caccgcgatc aggcccagca cggcaccgat gatgccgagc gtcggcgcat
     9661 agatgcccat cgcctcgaac accttggcgc cggcctggtc ctggtgttcc tggctgccca
     9721 gttcgatttc cagcatgtgc cgcatcgact ccggttcgac gccgtccacc agcagctgca
     9781 ggcccttgcg caggaacggg tcctgctgtg cttccacctg cgattccagg cccagcagac
     9841 cctggcggcg ggcgatgttg ctccactcga cgatctgctg gatcagctcg cggcggtcgc
     9901 tgtgcggcgg acgcacgacc cagcgcacga tcttgaacgc gtgcttgaac actgccggcg
     9961 aggtgtgcag caggatcgcg gcgatggtgc cgacgatgac gatcacgaac gccgcaggcg
    10021 accacaacga cgccaggccg gcgcccttga ggatgctgcc accgaccagc gaggccaggg
    10081 cgagaaagag tccaatgagg ctgagtctat ccatggttcc ggtatcggcg tgtatgaatg
    10141 ggacttgaga caccgggaga tcgcgtacag acggtagtca cagttttcgg gccgccgggc
    10201 agggcccggc ggggttcatc gcaggccatc cacatccagg atcagcgcca tgcgaccatc
    10261 gccgatcaag gttgcaccgg cgtaaccgcg caggccgcgc agggctttgg gcagcggctt
    10321 gatcaccact tcctcgcgcc cgcgcacctg gtccacgacc aggccgaagc gggcttcgcc
    10381 ggcctgcagt accacgatgg tcagcagggt cgaggcggcc ggcgtcacat ccagccactg
    10441 gcgcagatcg accagcggca gggtatgcga gcgccggtcg agcacggcac ggccatcgaa
    10501 ccagcccagc gaggtgcgcg gcgcatgcag cacttccatc acgcgcgcca gcggcagcgc
    10561 gtagacgtcc tcgccggcct gcaccagcag ggtcggcagg atcgccaggg tcagcggcac
    10621 gcggatcagg aagcggctgc cacggcccag ttccgactgg atctggatct ggccgctcag
    10681 ttcgcggatg cgcgactgca ccacgtccat gccgacgcca cggccggaga tatcggtgac
    10741 ctgctgcttg gtcgagaagc cgggcaggaa caccaggtgc aggcattcct cactgctcag
    10801 gcgggcggcg gcttccggat cgatcaggcc cttctcgcgt gccttcgcac gcagcttttc
    10861 cgggtcgatg ccggcgccat cgtcctgcac ttcgatgctg acatagtcgc cttcctgctg
    10921 ggccgacagc cgcacatggc ccatccgcgg cttgccctgc gcttcgcgca ggtcgggcat
    10981 ttccacgccg tggtcgatgg cgttgcggac caggtgcacc agcgggtcgg ccaaggcctc
    11041 gaccaggttg cggtcgagct cggtctcggc gccgatcagc tccaggtcca cttccttctt
    11101 cagtgatcgg gcgacgtcgc gggccacctt ggggaagcgc gagaacactt tgccgaccgg
    11161 ctgcatgcgg gtacgcatca ctgccgactg caggcgggcc gtggcgatgt ccagggtgga
    11221 gaccgcgcgg tccagctctt cgtcgcgcag gcgtgcgcgc agcgtcttca gccggttgcg
    11281 tgacagcacc agttcgccga tcaggttgac gatcgcatcc aggcgcttgg tgtccacgcg
    11341 cacggtgtgt tcggcctcgg ccagcggctt
//
LOCUS       DAOKIP010000129        11355 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.129,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000129 DAOKIP010000000
VERSION     DAOKIP010000129.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 11355)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11355)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11355
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.129"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(30..1193)
                     /locus_tag="QEL58_002758"
     CDS             complement(30..1193)
                     /locus_tag="QEL58_002758"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003489921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilT/PilU family type 4a pilus ATPase"
                     /protein_id="HDS1677208.1"
                     /translation="MPHWEPAVNTTATTIDFTSFLKLMAHQRASDLFITAGMPPAMKV
                     NGKISPITQTPLTPQQSRDLVLNVMTPAQREEFEKTHECNFAIGLSGVGRFRVSCFYQ
                     RNQVGMVLRRIETRIPTVEELSLPPIIKTLAMTKRGIILFVGATGTGKSTSLAAMIGY
                     RNQNSTGHIITIEDPIEFVHKHEGCIITQREVGIDTDSWEAALKNTLRQAPDVIMIGE
                     VRTREGMDHAIAFAETGHLVLCTLHANNANQAMDRIVNFFPEDRRNQLLMDLSLNLKG
                     VVAQQLIPSPDGRSRKVAMEILLGTPLVQDYIRDGEIHKLKEVMKDSVQLGMKTFDQS
                     LFELYQAGEISYEDALRYADSQNEVRLRIKLSQGGDARTLSQGLDGVEISEIR"
     gene            complement(1272..2309)
                     /locus_tag="QEL58_002759"
     CDS             complement(1272..2309)
                     /locus_tag="QEL58_002759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019185385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus twitching motility protein PilT"
                     /protein_id="HDS1677209.1"
                     /translation="MDIAELLAFSVKNKASDLHLSAGLPPMIRVDGDVRRINIPALDH
                     KQVHALVYDIMSDKQRRDYEEFLEVDFSFEIPSLARFRVNAFNQNRGAGAVFRTIPSE
                     VLTLEDLACPPLFREVIQQPQGLILVTGPTGSGKSTTLAAMIDYINKNEYGHILTVED
                     PIEFVHTSQKCLINQREVHRDTHGFNEALRSALREDPDIILVGELRDLETIRLALTAA
                     ETGHLVFGTLHTSSAAKTIDRIIDVFPAGEKPMVRSMLSESLRAVISQALLKKVGGGR
                     TAAWEIMVGTPAIRNLIREDKVAQMYSAIQTGQQYGMMTLDQHLQDLVKRSLITRNQA
                     RDYAKDKRLFE"
     gene            2397..3074
                     /locus_tag="QEL58_002760"
     CDS             2397..3074
                     /locus_tag="QEL58_002760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005412486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggS family pyridoxal phosphate-dependent
                     enzyme"
                     /protein_id="HDS1677210.1"
                     /translation="MATPLPQILSNLHAAAEAAGRPDPRLLAVSKTQPAEAVAALAAQ
                     GQHAFGENYVQEALAKMQALQHLALEWHLIGHLQSNKADAVASHFDWVQSVDRRKLVT
                     ALARHRPAERGPLNVLIQVNIDDESSKHGCAPEEVDALATAIAAESGLRLRGLMAIPA
                     PWPEAERRRDAFVRMRTLFQSLAAQHAQVDTLSMGMSGDYADAIAEGATLVRIGTALF
                     GARPRPA"
     gene            3093..3914
                     /locus_tag="QEL58_002761"
     CDS             3093..3914
                     /locus_tag="QEL58_002761"
                     /EC_number="1.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroline-5-carboxylate reductase"
                     /protein_id="HDS1677211.1"
                     /translation="MAADSITFIGGGNMARSLIAGLIRQGVPAAHIHVAEPVAALRQA
                     LAADFGVQVHDNAADAAAQGRTWLLAVKPQVLRDVCQSLQALAQAHRPLVVSIAAGIT
                     SAQLERWLGGHLPVVRAMPNTPALLGAGVTGLYATPSVDAQQHARAEQVLASAGRTVW
                     IDSETLMDSVTAVSGSGPAYVFLLAEAMEAAGIAQGLPADAARALVVQTLLGASRMLD
                     EAGESPAELRRRVTSPNGTTQAAIESFQAGGFEALVDKALRAAQVRGQELSAAND"
     gene            complement(3954..4829)
                     /locus_tag="QEL58_002762"
     CDS             complement(3954..4829)
                     /locus_tag="QEL58_002762"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019336940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDS1677212.1"
                     /translation="MDTLRCMQAFVAVAERGSFAGAAEQLQVSAVMVGKYIQQLEAHL
                     GTALLQRNTRRQRLTEAGSAYLAGCRQVLEQVQQAEADVAGLQVQPRGLLRVSAPSTW
                     GSCVLAPRLAALLRAQPQLNIELDLSNRRVDLIEDGFDVAIRVGPLPSQEVVARPLPP
                     YAMSLCAAPSYLRRRGTPRTPADLQGHDCLSHLAWRGGHGWQLANGEQVDWEARLTCN
                     DGVALREAAVAGAGLVLQPTALLAGEIAAGRLKPLLRDYLPEPRPMHLIYLPDRRPRP
                     RLQCFVDFVMATMGQ"
     gene            4930..5532
                     /locus_tag="QEL58_002763"
     CDS             4930..5532
                     /locus_tag="QEL58_002763"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004147070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="short chain dehydrogenase"
                     /protein_id="HDS1677213.1"
                     /translation="MKILLVGASGTLGQAVARQLGQQHQILAAGRHSGELRVDLTDDA
                     SVAELFARTGPVDAVISTAGKLYFGPLQEMTPEQFNIGLQDKLLGQVRLALAAQHHLN
                     AGGSITLTSGIVSAQPIRDGANATSVNAALEGFVRAAALELLPRGLRINVVSPNVLIE
                     SMAAYGPYFPGFEAVSAQRAALAFQRAVEGIQSGETLTVW"
     gene            complement(5615..6049)
                     /gene="soxR"
                     /locus_tag="QEL58_002764"
     CDS             complement(5615..6049)
                     /gene="soxR"
                     /locus_tag="QEL58_002764"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004147068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="redox-sensitive transcriptional activator SoxR"
                     /protein_id="HDS1677214.1"
                     /translation="MASQELSVGEVSQRSGVAVSALHFYERKGLISSLRTSGNQRRYS
                     RDVLRRLAVIRVAQRVGMPLEAVGRAFESLPEGRAPTKADWAKLSARWRTELEARIHM
                     LQLLRDELTGCIGCGCLSLKRCRLANPEDILGERGDGPMRWE"
     gene            6079..7500
                     /locus_tag="QEL58_002765"
     CDS             6079..7500
                     /locus_tag="QEL58_002765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012479330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDS1677215.1"
                     /translation="MLLSSPPVDKRGPQPICMTTMLSPADTPVPADTSILSARYRATT
                     IGMVALVALHAFEALAVAAAMPTVAEALDGLRLYALAFGGTLATSVIGMTLAGRWADR
                     HGPARPLWYGLACFVLGLLLAGFAMRMGMLVAGRLLQGLGAGAISVSLYVMVGRSYPE
                     HLRPKVFAAFSAGWVVPSMIGPALSGLIVQHLGWRWVFLAVPLLAVPAALLLRPALAR
                     MQSTAVGDRDDGRGKVVRWASGASLAALLLYFGGQQQGLPALLCIGAAMLALLLCVHR
                     LLPTGTLVLRRGLPSVIALRGIAAAAFFACEAYLPLLLQRERGLSPSWAGAVLSLGAL
                     GWFAGSWLQGHQQRGWSRQQLLRVGTAMMTVGIVATLAVLFNPVPLPVALVGWALTGF
                     GMGMIYASLSVLTLSLSVPHEQGANTSALQLSEALSVTTALAVTGALFALFVETAPHT
                     GYVLCLAITCGLAVLATVIARRV"
     gene            complement(7588..9609)
                     /locus_tag="QEL58_002766"
     CDS             complement(7588..9609)
                     /locus_tag="QEL58_002766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005415532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDS1677216.1"
                     /translation="MTQRPLARWQRLLPVLFAAFLLLGSSGCAMVTVKQVTSSDSLVN
                     KRADVLNTGKLSPAARETLSAAGLDESQCEKDFLVCRSTLLMTDDLNVEQRLSALSEL
                     WVKAALALTPKKTAAGDPPMSDAALDAWLEAARYAYAYLFYSGRSPSDRAFEDRQTQV
                     RDYYNYAAEKAAVVLFVRARASALAGEDYTKPISVGSWSLASNYQQLALKSIPAQLVP
                     AGTVSFVGLRSTYRRDGFGAELVMVMDPPKLVAPVIAPDGPKAETAADDEDDARRGRR
                     HRHDDSVPEFSEMSSINVTALLRFEGSSLDDVMRTRRVELDAYSPEATERITLHGEQV
                     PLAGNFTAAYGLWLAQSGFARQSLRTLFGMSEGIGEPHIYLMQPWDPNRRIIFMLHGL
                     ASSPEAWVNLANEIMGDPELRQQFQVWQVYYPTNAPIALNRYEIANAFNDTLKHFDPD
                     GSTRASKDMVYIGHSMGGVLARLLVSDSGDVLWNDLLANYDLKGERLKRVQAKLGPLL
                     HFKAQPNVERAIFIAAPHQGTDIAGNKVGRLIGRLVRLPLTILGKFEDVFMALAQAEQ
                     QVDGTAKPKIPNSIDNLKASDPFVKAAAQLPIEAGLKYHSIIAQRKPELPVEKSDDGL
                     VPYWSAHLPGALSEKVIISGHSVQETPQAVLEVRRILHRDIDDMGAATR"
     gene            complement(9609..10583)
                     /locus_tag="QEL58_002767"
     CDS             complement(9609..10583)
                     /locus_tag="QEL58_002767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019336935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4105 domain-containing protein"
                     /protein_id="HDS1677217.1"
                     /translation="MALAALWVTGLLAYQLPGPGALATTVAVLWLLVALWASWKVARG
                     RGNRRLGLGFAAALALAALWWLLLAPRQDRVWADDVAQRLHVVSFDGRHVVLDNVRDF
                     TWRSETDYDARWVRREYDLDQLRSADLVLSYWMGPAIAHTLISFGFDDGRHVVFSLEI
                     RKERGESFSALGGFFRKFEMTLVASEETDIIRTRTNARGEDVYLYRLHGMDRTQLKEL
                     FAAYIEQARELDAKPGFYNTLTSNCTTIVFDLARHIAPRLPLDYRLLLSGYLAEYAQE
                     VGALTPGVPYAELHDKGRITQRALDLDDGAHFSTVIRQGVPGTEQDPQ"
     gene            10755..11159
                     /locus_tag="QEL58_002768"
     CDS             10755..11159
                     /locus_tag="QEL58_002768"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GFA family protein"
                     /protein_id="HDS1677218.1"
                     /translation="MGITSVAGVPVQPRHRATCHCGTVELLLDLPDGIVDPRRCDCSM
                     CRRRGAIAASVTRAGLQVVRGQNHLRLYQFNTHVAEHYFCGVCGIYTHHRRRSNPEQY
                     GYNVACLEGIDPFALGVIPVNDGVNHPADRSA"
BASE COUNT         1765 a         3844 c         3799 g         1947 t
ORIGIN      
        1 gagcaagctc gactctacag atcgttgggt caccggatct cggagatctc cacgccatcc
       61 agcccctgcg acagggtgcg cgcgtcgccg ccctggctga gcttgatgcg cagacgcact
      121 tcgttctgcg aatcggcgta gcgcagtgcg tcctcgtagc tgatctcgcc ggcctggtac
      181 agctcgaaca ggctctggtc gaaggtcttc atgcccagct ggaccgaatc cttcatcact
      241 tccttcagct tgtggatctc gccgtcgcgg atgtagtcct gcaccagcgg cgtgcccagc
      301 aggatctcca tcgccacctt gcgcgagcgg ccatcgggcg aaggaatcag ctgctgcgcg
      361 accacgccct tgaggttcag cgacaggtcc atcagcaact ggttgcggcg gtcttccggg
      421 aagaagttga cgatgcggtc catcgcctgg ttggcgttgt tggcatgcag ggtgcacagc
      481 accaggtggc cggtttcggc gaacgcgatg gcgtggtcca tgccttcgcg ggtacgcacc
      541 tcgccgatca tgatcacgtc cggcgcctgg cgcagggtgt tcttcagcgc tgcttcccag
      601 ctgtcggtat cgatgccgac ttcgcgctgg gtgatgatgc agccctcgtg cttgtgcacg
      661 aactcgatcg ggtcttcgat ggtgatgatg tggccggtcg agttctggtt gcggtaaccg
      721 atcatcgctg ccagcgaggt cgatttaccg gtaccggtag caccgacgaa caggatgatg
      781 ccgcgcttgg tcatcgccag cgtcttgatg atcggcggca ggctcagctc ttccacggtc
      841 ggaatgcgcg tctcgatgcg gcgcagcacc atgccgacct ggttgcgctg gtagaagcag
      901 ctgacacgga agcggccgac accggacagg ccgatggcga agttgcactc gtgggtcttc
      961 tcgaattcct cgcgctgcgc cggggtcatc acgttgagca ccaggtcgcg gctctgctgc
     1021 ggcgtgagcg gggtctgggt gatcggcgag atcttgccgt tgaccttcat cgccggcggc
     1081 atgccggcgg tgatgaacag gtccgaggcg cgctggtgcg ccatcagctt gaggaacgaa
     1141 gtgaaatcga tggtggtcgc ggtggtgttc acggcgggct cccaatgggg catgtaccag
     1201 gaaacggtcg atggaggaaa cggcacggaa cggcggcgcc gtggcgcacg ccgccccgtt
     1261 gctgccccgc cttactcgaa caggcgcttg tccttggcgt agtcgcgggc ctggttgcgg
     1321 gtgatcaggc tgcgcttgac caggtcctgc aggtgctggt ccagggtcat catgccgtac
     1381 tgctggccgg tctggatggc cgagtacatc tgcgcgacct tgtcctcgcg gatcaggttg
     1441 cggatggccg gggtgccgac catgatttcc caggctgcgg tacgaccgcc gcccaccttc
     1501 ttcagcagtg cctgcgagat caccgcacgc agcgactcgg acagcatcga gcgcaccatc
     1561 ggcttttcgc cggccgggaa cacgtcgatg atgcggtcga tggtcttggc cgccgaactg
     1621 gtatgcaggg tgccgaacac caggtggccg gtttccgccg cggtcagcgc caggcggatg
     1681 gtttccaggt cgcgcagttc gcccaccagg atgatgtccg ggtcctcacg cagcgccgag
     1741 cgcagcgctt cgttgaagcc atgcgtatcg cggtgcactt cgcgctggtt gatcaggcac
     1801 ttctgcgagg tgtgcacgaa ttcgatcgga tcctcgacgg tgaggatgtg gccgtattcg
     1861 ttcttgttga tgtagtcgat catcgccgcc agcgtggtcg acttgcccga gccggtcggg
     1921 ccggtcacca ggatcaggcc ctgcggctgc tggatcacct cgcggaacag cggcgggcag
     1981 gccaggtctt ccagggtcag cacttcggac ggaatggtac ggaacaccgc accggcgccg
     2041 cggttctggt tgaacgcatt cacacggaag cgcgccagcg acggaatctc gaaggagaag
     2101 tccacttcga ggaattcctc gtaatcgcgg cgctgcttgt cggacatgat gtcgtacacc
     2161 agcgcgtgga cctgcttgtg gtccagggct gggatgttga tccggcgcac gtctccgtcc
     2221 acgcggatca tcggcggcag gcctgcggac aggtgcaggt cggacgcttt gttctttacg
     2281 gaaaacgcca acagctcggc gatatccatg agcggctact ccccaataac ggcttcgact
     2341 ggaaggatct ttccccgggc ggcagtatag cctcctgatt caacggaacg cgttacgtgg
     2401 ccactcccct gccccagatc ctgagcaacc tgcatgcggc cgccgaggcc gctggcaggc
     2461 ccgacccacg cctgctggcg gtgtccaaga cccagccggc cgaggccgtg gctgcgctgg
     2521 ccgcgcaggg ccagcatgcc ttcggcgaga actacgtgca ggaagcgctg gccaagatgc
     2581 aggcactgca gcacctggca ctggaatggc acctgatcgg ccacctgcag tcgaacaagg
     2641 ccgatgccgt ggccagccac ttcgactggg tgcagagcgt ggaccggcgc aagctggtga
     2701 ccgcgctggc acgccatcgg cctgcagagc gcgggccgct gaacgtgctg atccaggtca
     2761 acatcgacga cgaatccagc aagcacggct gtgcgccgga agaggtcgat gcgctggcca
     2821 ccgcgattgc cgccgaatcc ggcctgcgcc tgcgcggcct gatggcgatt cccgcaccgt
     2881 ggcccgaagc ggagcgccgt cgggatgcat tcgtgcgtat gcgcacactt ttccagtcgc
     2941 tggcggccca gcacgcgcag gtcgacaccc tgtcgatggg catgagcggc gattacgccg
     3001 acgccatcgc cgagggcgcc accctggtgc gcatcggtac cgccctgttc ggcgcgcgtc
     3061 cgcgcccggc ctgactttcc aaggagactt ccatggcagc tgattccatc accttcatcg
     3121 gcggcggcaa catggcccgc agcctgattg ccggcctgat ccgccagggc gtgcccgccg
     3181 cgcacatcca cgtggccgaa ccggtggccg cactgcgcca ggcgctggcc gccgacttcg
     3241 gcgtgcaggt gcatgacaac gccgccgatg ccgccgcgca gggccgcacc tggctgctgg
     3301 cggtgaagcc gcaggtgctg cgcgatgtgt gccagtcgct gcaggcactg gcacaggcac
     3361 accgcccgct ggtggtgtcg atcgccgcag gcattaccag cgcgcagctg gagcgctggc
     3421 tgggtggcca tctgccggtg gtgcgtgcaa tgcccaacac cccggccctg ctcggtgccg
     3481 gcgtgaccgg cctgtatgcg acgccgtcag tggatgcgca gcagcacgcg cgtgccgaac
     3541 aggtgctggc cagtgccggg cgcacggtgt ggatcgacag cgaaacgctg atggattcgg
     3601 tcaccgccgt ttcaggcagc gggcctgcct atgtattcct gctggccgaa gcgatggaag
     3661 cggccggcat cgcgcagggc ctgccggccg atgccgcacg tgcgctggtg gtgcagaccc
     3721 tgctgggggc atcgcgcatg ctggatgaag ccggcgaaag cccggccgaa ctgcgccgcc
     3781 gcgtgacatc gccgaacggc accacccagg cggcgatcga gagcttccag gctggggggt
     3841 tcgaggcgct ggtggacaag gcgctgcgcg ccgcgcaggt gcgcgggcag gaattgtctg
     3901 cggcgaatga ttgatcccga tgtgtgccga ccaacggtcg gcacccaccg tcatcattgc
     3961 cccattgtgg ccatgacgaa atcgacgaaa cactgcaacc gtgggcgcgg cctgcggtca
     4021 ggcaggtaga tcaggtgcat cggccgcggt tcgggcaggt agtcgcgcag cagcggcttc
     4081 aatcgcccgg ccgcgatttc acccgccagc agtgccgtcg gctgcagcac cagccccgca
     4141 ccggccacgg cggcttcgcg cagtgcaacg ccatcgttgc aggtcaaccg cgcttcccag
     4201 tccacctgtt cgccgttggc cagctgccag ccatggccgc cacgccaggc caggtggctc
     4261 aggcagtcat gcccttgcag atccgccggc gtgcgtggcg tgccacgccg gcgcaggtac
     4321 gacggcgcgg cgcacaggct cattgcatac ggcggcaacg gccgtgccac cacctcctgc
     4381 gacggtagcg gcccgacccg gatcgccaca tcgaatccat cctcgatcag gtccacgcgg
     4441 cggttgctca ggtccagctc gatgttcaac tgtggctgcg cacgcagcag ggcagccagc
     4501 cgtggcgcca gcacgcagct gccccaggtg ctcggcgcgc tgacccgcag caggccacgc
     4561 ggctgcacct gcaggcccgc cacatcggct tcggcctgct gcacctgttc cagcacctgc
     4621 cggcacccgg caaggtaggc gctgccggct tcggtcaggc gctggcggcg ggtgttccgt
     4681 tgcagcagcg cagtgcccag gtgcgcctcc agctgctgga tgtacttgcc gaccatcacc
     4741 gccgacacct gcaattgttc agcggcgccg gcaaagctgc cgcgctcggc cacggcgacg
     4801 aaggcctgca tgcagcgaag cgtatccatt actaacccca ggttaggaat ctgcgaagca
     4861 tacgccactt acctaaccat gccatgagcg cgcagacttc actcattccc cctctcgcaa
     4921 ggaacggcca tgaagatcct cctcgtcggt gccagcggca ccctcggcca ggcggtcgcc
     4981 cgccagctcg gccagcagca ccagatcctc gccgccggcc gccacagcgg cgaactgcgg
     5041 gtcgacctga ccgacgacgc cagcgtcgcc gaactgttcg cccgcaccgg cccggtcgat
     5101 gcggtgatct ccaccgccgg caagctgtac ttcggcccgc tgcaggagat gacacccgag
     5161 cagttcaaca tcggcctgca ggacaagctg ctgggccagg tgcggctcgc cctggccgcg
     5221 cagcaccacc tgaacgccgg tggttcgatc accctgacca gcggcatcgt cagcgcacag
     5281 ccgatccgcg acggtgccaa cgccacctcg gtgaacgccg cgctggaagg cttcgtgcgc
     5341 gcggccgcgc tggagctgct gccgcgcggc ctgcgcatca acgtggtcag cccgaacgta
     5401 ctgattgaat cgatggcggc ctacggcccc tacttccccg gcttcgaagc ggtgagcgca
     5461 caacgcgcgg cactggcctt ccagcgcgcg gtcgaaggca tccagagcgg cgagaccctc
     5521 accgtctggt aaagaaaaag gggacggagg ggattaagtc gtttcccgca cataaggggc
     5581 aatagcgact taatcccctc cgtccccttt ttcttcattc ccagcgcatc gggccgtcgc
     5641 cgcgttcgcc gaggatgtct tccgggttgg ccaggcggca gcgcttcagc gacaggcagc
     5701 cgcagccgat gcagccggtc agttcatcgc gcagcagctg cagcatgtgg atgcgcgctt
     5761 ccagttcggt gcgccagcgc gcggacagct tggcccagtc ggccttggtc ggcgcacggc
     5821 cctcgggcag gctctcgaag gcacggccca ccgcttccag tggcatgccc acgcgctgtg
     5881 ccacgcggat caccgccagc cggcgcagca cgtcacggct gtagcggcgc tggttgcccg
     5941 aggtgcgcag gctgctgatc agccccttgc gctcgtagaa gtgcagcgcg gaaaccgcta
     6001 cgccactgcg ctgggagact tcaccaacgc tcagttcctg ggacgccatc acttgaccta
     6061 aactgcagtt gaggtgtcat gctgctatct tcgccgccgg ttgacaagcg cggcccgcag
     6121 cccatctgta tgactaccat gctctcccct gccgataccc ctgtgccggc cgatacttcg
     6181 atcctgtccg cccgctaccg cgccaccacc atcggcatgg tcgcgctggt cgcgctgcac
     6241 gccttcgagg cgctggccgt ggctgccgcg atgcccaccg tggccgaagc gctcgatggc
     6301 ctgcgcctgt atgcgctggc gtttggcggc accctggcca ccagtgtgat cggcatgacc
     6361 ctggccgggc gctgggccga tcgccacgga ccggcgcgac cgctgtggta cggcctggcc
     6421 tgcttcgtac tgggcctgct gctggccggt ttcgcgatgc gcatgggcat gctggttgcc
     6481 gggcgcctgc tgcaggggct gggtgcaggc gcgatctcgg tttcgctgta tgtgatggtc
     6541 ggccgcagct accccgagca cctgcggccg aaggtgtttg cggccttctc cgcaggctgg
     6601 gtggtgccgt cgatgatcgg cccggcgttg agcggcctga tcgtgcagca tctgggctgg
     6661 cgctgggtgt tcctggcggt gccgctgctg gcggttcctg ccgccctgct gctgcgcccg
     6721 gcactggcgc gcatgcagtc caccgcagtc ggcgaccgcg acgatggacg tggcaaggtg
     6781 gtgcgttggg ccagcggggc ctcgctggct gcgctgctgt tgtatttcgg cggccagcag
     6841 cagggcctgc cggcgctgct ctgcatcggc gcggcgatgc tggcgctgct gctctgcgtg
     6901 caccgcctgc ttccgaccgg aacgctggtg ctgcgccgtg gcctgcccag tgtgatcgcg
     6961 ctgcgtggca tcgccgctgc ggccttcttc gcctgcgagg cctatctgcc gctgctgctg
     7021 caacgcgagc gcgggctctc gcccagctgg gccggcgcgg tgctcagcct cggcgcgctg
     7081 ggctggttcg ccggctcatg gctgcagggc caccagcagc gcggctggtc acgccagcag
     7141 ctgctgcgcg tgggcacggc gatgatgacg gtcggcatcg tcgccaccct ggcggtgctg
     7201 ttcaaccccg tgccactgcc ggtggcgctg gtcggctggg ccctgaccgg cttcgggatg
     7261 ggcatgatct acgccagcct gtcggtgctg acgctttcgc tgtcggtgcc gcatgagcag
     7321 ggcgccaaca cctcggccct gcaactgagc gaggcgttgt cggtgaccac cgcgctggcg
     7381 gtgaccggtg cgctgttcgc cctgttcgtg gaaaccgcgc cgcacaccgg ctatgtcctg
     7441 tgcctggcga tcacctgcgg gctggcggtg ctggcgacgg tgatcgcacg gcgggtgtag
     7501 gccaccggga ttcgggtagt gccggccgct ggccggcaac ctccacgcac gcaggaatgc
     7561 tgtgatgatg ccggccagcg gccggcacta cctggtagcg gcgcccatgt catcgatatc
     7621 ccggtgcagg atgcgccgca cttccagcac cgcctgcggg gtctcctgca cgctgtggcc
     7681 ggagatgatc accttctccg acagcgcgcc cggcaggtgt gcgctccagt acggcaccag
     7741 cccgtcatcg gacttctcca ccggcagttc cggtttgcgc tgggcgatga tcgagtggta
     7801 tttcaggccg gcctcgatcg gcagctgcgc ggccgccttc acgaatggat cgctggcctt
     7861 gaggttgtcg atgctgttgg gaatcttcgg cttggcggtg ccgtcgacct gctgctcggc
     7921 ctgtgccagt gccatgaaca catcctcgaa cttgccgaga atggtcagcg gcaggcgcac
     7981 cagccggccg atcaggcgcc cgaccttgtt gccggcgata tcggtgccct ggtgcggcgc
     8041 ggcgatgaaa atcgcgcgct ccacgttcgg ctgcgccttg aagtgcagca gcggccccag
     8101 cttggcctgc acgcgcttca ggcgctcgcc cttcaggtcg tagttggcca gcaggtcatt
     8161 ccacagcaca tcgccggaat cactgaccag caggcgggcc agcacgccgc ccatgctgtg
     8221 cccgatgtag accatgtcct tcgatgcccg cgtgctgcca tcggggtcga agtgcttcag
     8281 cgtgtcattg aacgcattgg cgatctcata gcggttcagc gcgatcggcg cattggtcgg
     8341 gtaatagacc tgccacacct ggaactgctg gcgcagctcg gggtcgccca tgatctcgtt
     8401 ggccaggttc acccaggcct ccgggctgct ggccaggccg tgcagcatga agatgatgcg
     8461 gcggttcggg tcccacggct gcatcaggta gatgtgcggc tcaccgatgc cctcgctcat
     8521 gccgaacagg gtgcgcagcg actgccgggc aaaaccgctc tgcgccagcc acaggccgta
     8581 cgctgcggtg aaattgccgg ccaacggtac ctgttcgccg tgcagggtga tgcgctcggt
     8641 ggcttccggc gagtaggcat ccagctcgac ccggcgcgtg cgcatcacgt cgtccaggct
     8701 gctgccctcg aagcgcagca gcgcggtgac gttgatcgag gacatttcgc tgaactcggg
     8761 caccgaatcg tcatgccgat ggcggcggcc acgacgcgcg tcatcctcat catccgcagc
     8821 ggtttcagcc ttcgggccgt ccggcgcgat caccggcgcg accagcttcg gcgggtccat
     8881 caccatcacc agttcggcac caaagccatc gcggcgatag gtgctgcgca ggccgacgaa
     8941 gctgaccgtt ccggccggca ccagctgcgc gggaatgctc ttcagggcca gctgctggta
     9001 gttggaggcc agcgaccagc tgccgaccga gatcggcttc gtatagtcct cacccgccag
     9061 cgcagacgca cgcgcgcgca cgaacagcac caccgccgcc ttctcggcgg cgtagttgta
     9121 gtagtcgcgc acctgcgtct gccggtcctc gaaggcgcgg tcagacggcg aacggccgct
     9181 gtagaacagg taggcatagg cgtaacgggc cgcttccagc caggcatcca gcgcggcatc
     9241 gctcatcggc ggatcgccgg cggcggtctt cttcggcgtc aacgccagtg cggccttcac
     9301 ccacagttcg gacagcgccg acagccgctg ttcgacgttg agatcatcgg tcatcagcag
     9361 cgtactgcgg cagaccagga agtccttttc gcactgcgat tcatccaggc ctgccgcact
     9421 gagcgtctcg cgcgcggccg ggctgagctt gccggtgttg agcacgtcgg cgcgcttgtt
     9481 gaccagcgaa tcactggacg tgacctgctt gacggtaacc atcgcgcagc cgctgctgcc
     9541 cagcagcagg aaggcggcga acaacaccgg cagcaggcgc tgccagcggg ccaggggacg
     9601 ttgggtcatt actgcgggtc ctgctcggtg ccgggcacgc cctggcggat tacggtggag
     9661 aaatgcgcgc cgtcatccag gtccagcgca cgctgggtga tgcggccctt gtcatgcagt
     9721 tcggcgtacg gcacgcccgg ggtgagcgca ccgacctcct gcgcgtactc ggccagatag
     9781 cccgacagca gcaggcgata gtccagcggc agccgcggtg cgatgtggcg ggccaggtcg
     9841 aagacgatgg tggtgcagtt gctggtcagc gtgttgtaga agcccggctt cgcatccagt
     9901 tcgcgcgcct gctcgatgta ggcggcgaac agttccttca gctgcgtgcg gtccatgccg
     9961 tgcaggcggt acaggtagac atcctcgccc cgcgcattgg tgcgggtgcg gatgatgtcg
    10021 gtctcctcgg aggccaccag ggtcatctcg aacttgcgga agaagccgcc cagcgccgag
    10081 aacgattcac cccgttcctt gcggatctcc agcgagaaca ccacgtggcg gccatcgtcg
    10141 aagccgaacg agatcagcgt gtgggcgatt gccgggccca tccagtacga cagcaccaga
    10201 tcggccgagc gcagctggtc caggtcgtac tcgcggcgca cccagcgcgc gtcatagtcg
    10261 gtttcgctgc gccaggtgaa atcacggacg ttgtccagca ccacatgacg cccatcgaac
    10321 gacaccacgt gcaggcgctg ggccacgtca tcggcccaca cgcggtcctg gcgcggcgcc
    10381 agcagcagcc accacagcgc ggccagcgcc agtgccgcgg cgaaccccag gcccagccgg
    10441 cggttgcctc ggccgcgtgc gaccttccac gatgcccaca acgcgaccag cagccacagc
    10501 acggccaccg tcgtggccag cgcacccggc cccggcagct ggtaggccag cagcccggtc
    10561 acccacagcg ccgccagcgc catggcactt cctgtcatcc aacgtcctgc ggtgttcact
    10621 ggcatcctgt ggcggtattc aagccgcata gttagccaca agccgcatca gcgtggcatc
    10681 tacggcccgt tcaggcaggc cggcgcaccg tcggcagcgg cgcccgaagc caggttcacc
    10741 acacaggagc atcaatgggc attacatccg tggccggcgt tccggtccaa ccccggcacc
    10801 gcgcaacctg ccactgcggc acggtcgaac tgctgctgga tctgccggac ggcatcgtcg
    10861 acccacgccg ctgcgactgc tcgatgtgcc ggcgccgtgg cgccatcgcc gccagcgtga
    10921 cccgtgcggg actgcaggtg gtgcgcgggc agaaccacct gcggctgtac cagttcaaca
    10981 cccatgtggc cgagcattac ttctgcggtg tgtgcggcat ctacacccac caccggcgtc
    11041 gctccaatcc cgagcagtac ggctacaacg tggcctgcct ggagggcatc gacccgttcg
    11101 cgctgggcgt gatcccggtc aacgatggcg tcaaccaccc ggccgaccgc agcgcctagt
    11161 gccgcgtgcg tcgcagcggt gccgccactt tctgccaggg cgccatgcca ctgcgaccgg
    11221 cgcgtgcggg gcgtttcagc caagggcggc ggggcgctgc ctgcggctcg gcagcgaccg
    11281 ggggaggaag gggcctgcgg ccaggccaga gatggtcgag cagccacatg gcgggtctcc
    11341 gcgggggacg gggac
//
LOCUS       DAOKIP010000130        11308 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.130,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000130 DAOKIP010000000
VERSION     DAOKIP010000130.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 11308)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11308)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11308
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.130"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(2..1591)
                     /locus_tag="QEL58_002769"
     CDS             complement(2..1591)
                     /locus_tag="QEL58_002769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase D family protein"
                     /protein_id="HDS1677219.1"
                     /translation="MRGPVDPERRRRLLRMAWQGTGAAIALAAMPGLATAGPRPRLGR
                     DPFTLGVAAGDPDPQGAVLWTRLAPDPLNGGGMPSRAVPVRWFVAEDPGMRRLVQRGV
                     AAAVPELAHSVHVEVNGLRPGRDYYYRFACDGDEESAVGHFRTAPLLDTQLQQLRLAL
                     CTCQAWNSGYYPVLRDIAQSDVDLVLHAGDYLYEYSPLQNARGRTLDAERFSGETVSL
                     ERYRDQYALYKLDPDLQAAHAAHAFAVIWDDHEVQNDYSGIHPEKPGVSIEDFIVRRA
                     AAYRAFYEHLPMRSAPTGNGGLRVHRRLRYGDLAQLTLLDCRQFRPANPCGVGESPRC
                     DAALDPRMSMLGAGQEAWFAQSMAAARGTRWNVVVQQLLMAQLRLDGGTPRERFWNDA
                     WDGYPAARKRLLQALQAGGQGNAIVLGGDWHSTFVNDLKLDFDTADAPVLATEFIAPA
                     ISSGGDDTPYGPYYGPSIPQNPHIRYFDGDRRGWWKLQLNRQTVDAELRFADSVLRAD
                     APVRTAARFQVTHGRPGALPV"
     gene            complement(1591..3834)
                     /locus_tag="QEL58_002770"
     CDS             complement(1591..3834)
                     /locus_tag="QEL58_002770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012511585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDS1677220.1"
                     /translation="MPSHAPLRRNLLALLVCASLPSLAAAETAPATDAQSATTLDSIS
                     VIGRGEARQVQRVTAEDMKVLPPGANPLKLLATKPGVHFESADATGAYEWSTTISLRG
                     FNQNRLGYTLDGIPLGNMAYGNSNGLHISRAVISENLGGAEVSTGIGALGTPSTSNLG
                     GVFQFYSIDPSTEYGVVLAQGFGSDSARRSYARLETGEHQGFAAYLSGVYSEGDKWKG
                     KGSQELKQFNSKATYNFGTDSKITALFNVSRRVEADYQDLSLEMIDRLGWDWDNYAPD
                     WDRAVAAARGTFSGGVNSPWDAYYSGHGLRNDDLSSIAGDFGLNESMRLKVNVYNHSN
                     RGQGHWFSPSNPSNPGTSREIPISIRTTEYAIDRTGVTSAFTWNVGGHELEAGLWYED
                     NGHSVQRNFYYIDGPVTDDFFLRNPDQRVWHQRYTTITRQFYVQDRFRLFDDRLTIDI
                     GAKSPHTRTSVRTPLGSYANNSSLTARKGFLPQAGFNFKLNEGNEIFGSFAKNIAAYA
                     LGVGSPFNVPQAAFDASAQNLKPEQSRTLELGWRGYGQGYEASVAVYDVKFDNRLLAI
                     AQCVGILGCPALFSNVGSVTSRGAEATLQLKPMQDLAWSNALSWNDSTYDNDYVNNGV
                     VPTRGKKTVDTPEWMFASTLAWTPGPWDMRLSANHVGKRYVTYTNDVSVPSYWLVNAS
                     VAYDFGTLGPAQNLTVALNLTNLTDKRYLSSINTNGTYAADPTRSLATMQVGAPRQVM
                     ATATVRF"
     gene            complement(4008..5438)
                     /locus_tag="QEL58_002771"
     CDS             complement(4008..5438)
                     /locus_tag="QEL58_002771"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006377195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replicative DNA helicase"
                     /protein_id="HDS1677221.1"
                     /translation="MSARSGFRSNRRERGDGFDRDRDESRIDQLRVPPHSVEAEQAVL
                     GGLMLAPEAYDRVNDQLTEGDFYRRDHQMIYRAIRELSERERPFDAVTLGEWFESQGK
                     LELVGDGAYLIELASTTPSAANIVAYAEIVRDKAVLRQLIQVGTDIVNDGFQPEGRDS
                     SELLASAEKSVFAIAEQGARGRTDFVAMPGALKDAFEELRNRFENGGNITGLPTGYND
                     FDAMTAGLQPTDLIILAARPAMGKTTFALNIAEYAAIKSKKGVAVFSMEMSASQLAMR
                     LISSNGRINAQRLRTGQLEDEDWSRVTSAIKMLKETKIFIDDTPGVSPEVLRSKCRRL
                     KREHDLGLVVIDYLQLMSVPGNSENRATEISEISRSLKGLAKELHVPVIALSQLNRSL
                     ETRTDKRPVMADLRESGAIEQDADMIVFIYRDDYYNKENSPDKGLAEIIIGKHRGGPT
                     GSCKLKFFGEYTRFDNLAHDSVGSFE"
     gene            complement(5652..6212)
                     /locus_tag="QEL58_002772"
     CDS             complement(5652..6212)
                     /locus_tag="QEL58_002772"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HDS1677222.1"
                     /translation="MSIPTIAVFVGSLRKDSCNRKLAHALEKIAGQRARFQYVQIGDL
                     PLYDQDFDGHYPPQGTRLKDQVRAADAVLFVTPEYNRSVPGVLKNAIDIGSRPYGDSA
                     FAGKPAAVIGASIGQIGTAVAQQHLRNSLAFLDMHVLGQPEAFIHFKDGLIDADGTVH
                     NEGTQKFLQGYVDRFLSLIAVHVKGD"
     gene            complement(6279..8222)
                     /gene="asnB"
                     /locus_tag="QEL58_002773"
     CDS             complement(6279..8222)
                     /gene="asnB"
                     /locus_tag="QEL58_002773"
                     /EC_number="6.3.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine synthase (glutamine-hydrolyzing)"
                     /protein_id="HDS1677223.1"
                     /translation="MCGLAGMLLPAPVASAEVLQAQVLAMGEALHHRGPDDGGRWVDA
                     GAGIALAHRRLSILDLSPLGHQPMASADGRYVMAYNGEVYNFAALRAELEPLGHAFRG
                     HSDTEVLLAAILQWGFEDTLQRCNGMFAIALWDRQEQCLWLARDRVGKKPLYYGWAGD
                     TLVFGSELKALWQHPAFDNDIDRDALTLLLRLDYIPAPHSIHQRCYKLMPGRVLRLDA
                     ATVAAGAAAHRPEQAQRPFWDARARMQAALAAPFQGRIEEAEEQLDGLLRDAVALRMV
                     ADVPVGVFLSGGTDSSLVAALMQAQSGQPVHSFSIGFTGSGHDEAPLARELATHLGCD
                     HTELYVSGADALAVVPQLPAMFDEPFADASQVPTALVARLARQGVTVALSGDGGDELF
                     FGYTRYVRALRNWQMLGRVPGPLRRWMGARSQQQGEASRTGGLAALLAESGARGIGDV
                     YRNRISRWRDPAAAVPGAQAAGSFYDLADPLHGAGTPADAMMLADYVTYLPDDLLCKV
                     DRTSMAVSLEARAPLLDWRVAEFAWSLPLGFKRSETTSKVLLKRVLGRYVPQSMVHRP
                     KRGFGAPVSDWLKGDLRPWAEDLLQPVRLEREGVLSAAAVQPLWQQFLGGQRKWHTHL
                     WNVLMFQAWQAHWRQVRAGVTGR"
     gene            complement(8226..10505)
                     /locus_tag="QEL58_002774"
     CDS             complement(8226..10505)
                     /locus_tag="QEL58_002774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005417532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDS1677224.1"
                     /translation="MFAVVPDPIPARMRVLNRADVCDANFLDAVRGWRGTPRQRPAPD
                     APILPGSTLTAAAFADLFDSQLASRQLDLMARVLRVQNKVFYTIGSSGHEGNALLARA
                     SRHTDPAFLHYRSGAFMAERSRQVPGIDPLRDAALSFAASADDPASGGRHKVWGSKPL
                     WVLPQTSTIASHLPKALGTALAIESGKRLGQPLPIPADSIVLCSFGDASANHATAQTA
                     FNTAMWSAYQKLPAPVLFVCEDNGLGISVKTPDGWIAERFSRQPGLDYFFADGLDLAV
                     GHAQVQAAVEHCRRTRRPTFLHLRTTRLMGHAGTDFEVEWRALPELCAAEAQDPLLRS
                     AQIAMESGWMDAAAIEVAYETMRARCMAAAAEAEGRPKLQSLQDVMAPLAPYTPAAVL
                     AEARREVADEAREALYGGAEAPPERQAPRHLAIQINHGLQELLAKYPQSLLFGEDVAQ
                     KGGVYTVSKDLLRRFGPRRVFNTLLDETMILGMAQGLANMGMLPIPEIQYLAYLHNAI
                     DQVRGEACSLQFFSNDQFRNPMLVRVAGLGYQKGFGGHFHNDNSITALRDIPGLVVGC
                     PSRGDDAVMMLRTLAALARVDGRVAVFLEPIALYMSKDLHEAGDGQWLFDYPAQGQAL
                     VPGEGRVYAADAGDLVVFTYGNGVPMALRAARAIEQQLGWQVRVVDLRWLVPLDAAFI
                     ATQAASARRVLVLDEGRHSGGVGEGVVTALVEAGFGHLPLRRVCGADTYTPLAGAAMF
                     GLPSDNAVIGAALELAQEP"
     gene            complement(10568..11224)
                     /locus_tag="QEL58_002775"
     CDS             complement(10568..11224)
                     /locus_tag="QEL58_002775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HDS1677225.1"
                     /translation="MVEERVPLTVHGMSVSGNCHKVRLLLEQLGSRYRWVEVDSAHGQ
                     THTAEFLALNPNAKVPLIVRDDGRVLTESNAILFWLAEGTPYLPSDGWERAQALSWMF
                     FEQYTHEPCVAVARFIRGWTAPDSPRRAELPRLHERAATALAVMEQHLRQAPWFTGSE
                     YGIADIALFAYTDVAGEGGIDLAPFPEVRAWLQRVRGQPRFLPMPAVTAEVRARFDAA
                     "
BASE COUNT         1826 a         3861 c         3795 g         1826 t
ORIGIN      
        1 ttcacaccgg cagtgcgccc gggcggccat gggtcacctg gaagcgggca gccgtgcgta
       61 ccggcgcatc cgcacgcagc acgctgtcgg cgaagcgcag ctcggcgtcc accgtctgcc
      121 ggttcagctg cagcttccac cagccacggc gatcaccatc gaaatagcgg atatgcgggt
      181 tctgcggaat cgacggaccg taatacggcc catagggcgt atcgtcgccg ccactgctga
      241 tcgctggggc aatgaactcg gtggccagca ccggggcatc ggccgtgtcg aaatccagct
      301 tcaggtcgtt gacgaaggtg gaatgccagt cgccaccgag cacgatggcg ttgccctgcc
      361 cgcctgcctg cagcgcctgc agcaagcgtt tgcgggcagc gggatagcca tcccaggcgt
      421 cgttccagaa acgctcgcgc ggcgtgccgc cgtccagccg aagctgcgcc atcagcagct
      481 gctgcaccac cacgttccag cgcgtgcccc gtgcggcggc catcgactgc gcgaaccacg
      541 cttcctggcc cgcaccgagc atgctcatgc gcgggtccag cgcggcatca cagcgtggtg
      601 actcgccgac gccacaggga ttggccgggc ggaattgcct acagtcgagc agggtcagct
      661 gtgccagatc gccatagcgc aggcgacggt gcacgcgcag gccgccattg ccggtcggcg
      721 cgctgcgcat cggcaggtgt tcgtagaacg cacggtaggc cgcggcgcga cgcacgatga
      781 agtcctcgat cgacacgccg ggcttttccg ggtggatgcc ggagtagtcg ttctgcactt
      841 catggtcgtc ccagatcacc gcgaacgcgt gtgcggcatg cgcggcctgc aggtcggggt
      901 caagcttgta cagcgcgtac tggtcacggt agcgctccag gctgaccgtc tcgccgctga
      961 agcgctcggc atccagggtg cgcccgcgtg cgttctgcag cgggctgtat tcgtacaggt
     1021 agtcaccggc atgcagcacc aggtcgacat cgctctgtgc gatatcgcgc agcaccggat
     1081 agtagccact gttccaggcc tggcaggtgc acagggccag ccgcagctgc tgcagttgcg
     1141 tgtccagcag cggcgcggtg cggaagtggc cgaccgcgct ttcctcatcg ccatcgcagg
     1201 cgaatcgata gtagtagtcg cggcccgggc gcaggccatt gacctccacg tgcaccgaat
     1261 gggccagctc cggcaccgcg gcggcaacgc cacgctgcac cagccggcgc atgcccgggt
     1321 cttcagccac gaaccagcgc accggcaccg cccgcgacgg catgccgccg ccgttgagcg
     1381 ggtccggggc caaccgcgtc cacagcaccg ccccctgtgg atccggatca ccggcggcga
     1441 caccgagggt gaacggatca cgccccagcc gcggccgtgg gccggccgta gccaaccccg
     1501 gcatcgccgc cagcgcgatc gccgcccccg tgccctgcca cgccatgcgc aacaggcgac
     1561 gacggcgttc cggatcgaca ggcccgcgca tcagaagcgc acggtggcgg tggccatcac
     1621 ctgccgcggt gcaccgacct gcatggtggc caggctgcgg gtcgggtcgg cggcataggt
     1681 gccattggtg ttgatcgacg acaggtagcg cttgtcggtg aggttggtca ggttcaacgc
     1741 cacggtcagg ttctgcgctg ggcccagcgt gccgaagtca taggccaccg aggcattgac
     1801 cagccagtag ctcggcaccg acacatcgtt ggtgtaggtc acgtagcgct tgccgacatg
     1861 gttggccgac aggcgcatgt cccacgggcc cggggtccac gccagggtgc tggcgaacat
     1921 ccattccggg gtgtcgacgg tcttcttgcc gcgggtcggc accacgccgt tgttcacgta
     1981 gtcgttgtcg taggtgctgt cattccacga cagcgcgttg gaccaggcca gatcctgcat
     2041 cggcttcagc tgcagggtcg cctcggcgcc gcggctggtc accgaaccca cgttcgagaa
     2101 cagcgccggg cagccgagga tgcccacgca ctgggcgatc gccagcaggc ggttgtcgaa
     2161 cttcacgtca tacaccgcga ccgaggcttc atagccctgg ccgtagccac gccagcccag
     2221 ctccagcgtg cgcgactgct ccggcttcag gttctgcgcg ctggcatcga acgcggcctg
     2281 cggcacgttg aacgggctgc ccacgcccag cgcataggcc gcgatgttct tggcgaacga
     2341 accgaagatc tcgttgcctt cgttgagctt gaagttgaag ccggcctgcg gcaggaagcc
     2401 cttccttgcg gtcaggctgc tgttgttggc atagctgccc agcggcgtgc gcacgctggt
     2461 gcgggtgtgc ggcgacttcg cgccgatgtc gatggtcagg cggtcatcga acaggcggaa
     2521 gcggtcctgc acgtagaact ggcgggtgat ggtggtgtag cgctggtgcc acacgcgctg
     2581 gtccggattg cgcaggaaga agtcgtcggt gaccgggccg tcgatgtagt agaagttgcg
     2641 ctgcacgctg tggccgttgt cctcgtacca gaggccggct tcgagttcgt ggccgccgac
     2701 attccaggtg aatgccgagg tcacgccagt gcggtcgatc gcgtactcgg tggtgcggat
     2761 cgagatcggg atctcgcggc tggtgcccgg attggacgga ttggacgggc tgaaccagtg
     2821 gccctggcca cggttgctgt ggttgtagac gttgaccttc agccgcatcg attcgttcag
     2881 gccgaaatca ccggcgatgc tggacaggtc atcgttgcgc aggccatggc cggagtagta
     2941 cgcatcccac gggctgttga cgccgccgct gaatgtgcca cgtgcggcgg cgaccgcgcg
     3001 atcccaatcc ggcgcgtagt tgtcccagtc ccagccgagg cgatcgatca tctccagcga
     3061 caggtcctgg tagtccgctt cgacgcgccg cgagacgttg aacaacgcgg tgatcttgct
     3121 gtccgtgccg aagttgtagg tcgccttgct gttgaactgc ttcagctcct gcgagccctt
     3181 gcccttccac ttgtcgccct cggagtacac gccggacagg taggcggcga aaccctggtg
     3241 ctcaccggtc tccaggcgcg cataactgcg gcgtgcactg tcgctgccga agccctgcgc
     3301 cagcaccacg ccatattcgg tggacggatc gatcgaatag aactggaaca cgccaccgag
     3361 gttgctggtg gacggggtac ccagcgcgcc gataccggtg gagacttcgg caccgccgag
     3421 gttctcgctg atcaccgcgc ggctgatgtg caggccgttg ctgttgccat aggccatgtt
     3481 gcccagcgga atgccatcga gggtgtagcc gaggcggttc tggttgaagc cgcgcaggct
     3541 gatggtggtg gaccattcgt aggcgccggt ggcatcggcc gattcgaaat gcacgcccgg
     3601 cttggtcgcg agcagcttca gcggattggc gccgggcggc agcaccttca tgtcctcggc
     3661 ggtcacgcgc tgcacctggc gggcttcgcc gcggccgatc accgagatcg aatcgagcgt
     3721 ggtggccgac tgcgcgtcgg tggcgggagc ggtttcagca gcggccagcg acggcagcga
     3781 agcacagacc agcagggcca gcaggttgcg gcgaagcgga gcgtgggacg gcatggggcg
     3841 gattccttgg gcacgctgga cgccgaaggg cggcgtcgaa agggcagcag cggcggaatc
     3901 gtagaagcgg cgcgttacat gtcatttaca cgccacgtac ggaagtttgg cgttgcggat
     3961 ggtctgccgg ccgtggggcg gttgccggcc agcggccggc actatggtta ttcgaacgaa
     4021 ccgaccgagt cgtgggccag gttgtcgaaa cgcgtgtact cgccgaagaa cttcagcttg
     4081 cacgagccgg tcgggccacc acggtgcttg ccgatgatga tctcggccag gcccttgtcc
     4141 ggcgagtttt ccttgttgta gtagtcgtcg cggtagatga acacgatcat gtccgcgtcc
     4201 tgctcgattg cgcccgattc gcgaaggtcg gccatcaccg ggcgcttgtc tgtacgcgtt
     4261 tccagcgagc ggttgagctg ggacagcgca atcaccggca cgtgcagttc cttggccagg
     4321 cccttcagcg aacgcgagat ttccgaaatt tcggtcgcgc ggttttcgct gttgccgggc
     4381 acgctcatca gctgcaggta gtcgatcacc accaggccca ggtcgtgctc gcgcttgagg
     4441 cggcggcact tggagcgcag cacttccggc gacacgcccg gcgtatcgtc gatgaagatc
     4501 ttggtttcct tcagcatctt gatcgcactg gtgacgcggc tccagtcctc gtcttccagc
     4561 tggccggtac gcaggcgctg tgcgttgatg cggccgttgg aggaaatcag gcgcatcgcc
     4621 agctgcgagg ccgacatttc catcgagaac accgccacgc ccttcttcga cttgatcgcc
     4681 gcgtactcgg cgatgttcag cgcgaaggtg gtcttgccca tggccgggcg cgcggcgagg
     4741 atgatcaggt cggtcggctg caggccggcg gtcatcgcat cgaagtcgtt gtagccggtc
     4801 ggcaggccgg tgatgttgcc gccgttctcg aagcggttgc gcagttcctc gaacgcgtcc
     4861 ttcagggcgc cgggcatcgc cacgaaatcg gtacggccac gtgcgccctg ctcggcgatg
     4921 gcgaacacgc tcttttccgc cgacgccagc agctcgctgc tgtcacggcc ctcgggctgg
     4981 aaaccgtcgt tgacgatgtc ggtaccgacc tggatcagct gccgcagcac cgccttgtca
     5041 cgcacgatct cggcgtaggc cacgatgttg gccgccgacg gcgtagtgct ggccagctcg
     5101 atcaggtagg cgccgtcgcc gaccagctcc agcttgccct gcgattcgaa ccactcgccc
     5161 agggtgaccg cgtcgaacgg ccgttcgcgc tcggacagct cacggatcgc gcggtagatc
     5221 atctggtgat cgcggcggta gaaatcgcct tcggtcagct ggtcgttgac ccggtcatac
     5281 gcttcgggcg ccagcatcag gccacccagc accgcctgct cggcctccac cgaatgcggc
     5341 ggtacccgca gctgatcgat gcgcgattca tcgcgatcac gatcaaaacc atcgccgcgc
     5401 tctctgcggt tggaacggaa gccggaacgg gcggacatgc tgcggtgttt cctgcaaaag
     5461 tggaccagac gagtgtaggc atgcgccgac cccggcggcc atggacaagc ctgtggataa
     5521 gccgtggaga aacgggggat atccgccggt gcctggccag actggcgtgg gggcgtcgcg
     5581 ctgcctgcga cgggtgccat tgcggcaccc gagcaggcca ttatcgcaga tgggggcgac
     5641 cgccgctggc gtcaatcgcc cttgacgtgc accgcgatca gcgacaggaa ccggtccacg
     5701 tagccctgca ggaatttctg cgtgccctcg ttgtggaccg tgccgtcggc atcgatcagg
     5761 ccgtccttga agtggatgaa cgcctcgggc tggccgagca cgtgcatgtc gaggaaggcc
     5821 aggctgttgc gcaggtgctg ctgggccacg gcggtgccga tctggccgat ggaggcgccg
     5881 atcaccgccg ccggcttgcc ggcaaacgca ctgtcaccat acggtcgcga gccgatgtcg
     5941 atggcgttct tcagcacgcc cggcaccgac cggttgtatt ccggggtcac gaacagcacc
     6001 gcgtcggcgg cgcggacctg gtccttcagc cgcgtgccct gcggcggata gtgtccatcg
     6061 aagtcctggt catacagcgg caggtcgccg atctgcacgt actggaagcg tgctcgctgg
     6121 ccggcgatct tctccagcgc atgggccagc ttgcggttgc aggagtcctt gcgcaggctg
     6181 ccgacgaaca cggcgatggt ggggatggac atcgggacat actcctcacg gtgcgggacg
     6241 cccagcctag tcgccggccc cgtgcgcccc ggtgaagatc agcggccggt cacgcccgcc
     6301 cgcacctgcc gccaatgcgc ctgccaggcc tggaacatca gcacgttcca caggtgggta
     6361 tgccacttgc gctgcccgcc gagaaactgc tgccacagcg gctgcaccgc cgccgccgac
     6421 agcacgcctt cgcgttccaa tcgaaccggc tgcagcagat cctcggccca cggccgcagg
     6481 tcgcccttca gccaatcgct gaccggcgca ccgaaaccgc gcttgggccg gtgcaccatc
     6541 gactgcggca cgtagcggcc aagaacacgc ttgagcagca ccttgctggt ggtttcactg
     6601 cgcttgaagc ccagcggcag cgaccacgcg aactcggcca cgcgccagtc cagcaacggc
     6661 gcgcgcgctt ccaggctgac cgccatcgag gtgcggtcga ccttgcatag caggtcatcc
     6721 ggcaggtagg tcacgtaatc ggccagcatc atcgcgtcgg ccggcgtgcc ggcgccgtgc
     6781 agcgggtcgg ccaggtcata gaagctgccc gccgcctgcg cccccggtac cgctgcggcc
     6841 gggtcgcgcc agcgcgagat gcggttgcgg tacacatcgc cgataccgcg cgcgccggac
     6901 tcggccagca gtgcggccag gccaccggta cgcgaggcct cgccctgctg ctgcgaacgc
     6961 gctcccatcc agcgccgcag cggccccggc acgcggccca gcatctgcca gttgcgcagc
     7021 gcgcgcacat aacgggtgta accaaagaac agttcatcgc cgccatcgcc ggacagcgcc
     7081 accgtcacgc cctgccgggc caggcgcgcg accagcgcgg tcggcacctg cgaggcatcg
     7141 gcgaagggct cgtcgaacat cgccggcaac tgcggcacta ccgccagcgc gtcggcaccg
     7201 ctgacataca actcggtgtg gtcgcagccc aggtgcgtcg ccagctccct ggccagcggc
     7261 gcctcgtcgt ggcccgaacc ggtgaaaccg atgctgaagc tgtgcaccgg ctgcccgctc
     7321 tgggcctgca tcagcgccgc caccagcgac gaatcggtgc cgccggacag gaacacgcct
     7381 accggaacgt cggccaccat gcgcagcgcc accgcatcgc gaagcaggcc atccagctgt
     7441 tcctcggcct cttcgatacg accctggaac ggcgccgcca acgccgcctg catgcgcgcg
     7501 cgcgcatccc agaaaggacg ttgcgcctgc tccgggcggt gcgcggccgc accggccgcc
     7561 acggtcgctg catccaggcg cagtacgcgg cctggcatca gcttgtagca gcgctggtgg
     7621 atgctgtgcg gtgccgggat gtagtccagc cgcagcagca gggtcagcgc atcgcggtcg
     7681 atgtcgttgt cgaacgccgg atgctgccac agcgccttca gttcggaacc gaacaccagc
     7741 gtgtcgccgg cccagccgta gtacagcggc ttcttgccga cacggtcgcg ggccagccac
     7801 aggcactgtt cctgccggtc ccacagggcg atcgcgaaca tgccgttgca acgctgcagg
     7861 gtgtcttcaa agccccactg caggatcgct gccagcagga cttcggtgtc ggagtggccg
     7921 cggaaggcgt ggcccagcgg ttccagctcg gcgcgcagcg cggcgaagtt gtagacctcg
     7981 ccgttgtagg ccatcacata gcgaccgtcg gccgaggcca tcggctggtg gcccagcggg
     8041 gacaggtcga gaatgctcag gcggcggtgc gccagcgcga tgccggcccc ggcatcgacc
     8101 cagcggccac catcatccgg cccgcggtgg tgcagtgcct cgcccatggc cagcacctgc
     8161 gcctgcagca cctcggccga cgccaccggc gccggcaaca acattcccgc caatccacac
     8221 atgcatcagg gttcctgcgc cagttcaagg gcggcgccaa tcactgcatt gtcgcttgga
     8281 agcccgaaca ttgctgcccc cgccagcggg gtataggtat cggcaccgca gacccggcgc
     8341 agcggcaggt ggccgaagcc ggcctcgacc agcgcggtga ccacgccctc gcccaccccg
     8401 ccgctgtgcc gcccctcgtc cagcaccagc acccgccggg cactggcggc ctgtgtggcg
     8461 atgaaggcgg catccagtgg caccagccag cgcaggtcga ccacccgcac ctgccagccc
     8521 agctgctgct cgatcgcgcg cgccgcacgc agcgccatcg gcacgccgtt gccataggtg
     8581 aagaccacca ggtccccggc gtcggcggcg tagacccggc cctcgcccgg caccagcgcc
     8641 tggccctgcg ccgggtagtc gaacaaccac tggccatcgc ccgcttcgtg caggtccttg
     8701 ctcatgtaca gcgcgatcgg ctcaaggaac acggccaccc gcccatccac ccgcgccagc
     8761 gcggccagcg tgcgcagcat catcaccgca tcgtcgccgc gcgacgggca accgaccacc
     8821 aggccgggga tgtcgcgcag cgcggtgatc gagttgtcgt tgtggaaatg gccaccgaag
     8881 cccttctggt agcccagccc ggccacccgt accagcatcg ggttgcggaa ctggtcgttg
     8941 gagaagaact gcagcgagca ggcttcgccg cgcacctggt cgatggcgtt gtgcagatag
     9001 gccaggtact ggatttccgg gatcggcagc atgcccatgt tggccaggcc ctgggccatg
     9061 cccaggatca tggtctcgtc cagcagggtg ttgaacaccc ggcgcgggcc gaaccggcgc
     9121 agcaggtcct tgctgaccgt atacaccccg cccttctgcg ctacgtcctc accgaacagc
     9181 aggctctgcg ggtacttggc cagcagttcc tgcaggccgt ggttgatctg gatcgccaga
     9241 tgccgcggtg cctgccgctc cggcggcgcc tcggcaccgc cgtacagggc ctcgcgcgct
     9301 tcgtcggcaa cctcacgccg ggcctcggcc agcaccgccg ccggcgtgta cggcgccagt
     9361 ggcgccatca cgtcctgcag cgactgcagc ttcgggcggc cttcggcctc ggcggcggcg
     9421 gccatgcagc gcgcacgcat ggtctcgtag gccacctcga tggcggcggc atccatccag
     9481 cccgactcca tcgcgatctg cgccgagcgc agcaacgggt cctgtgcctc ggccgcgcac
     9541 agctccggca acgcgcgcca ttccacttca aaatcggtgc cggcatggcc catcaggcgc
     9601 gtggtgcgca ggtgcaggaa ggtcggccgc cgggtacgcc ggcagtgctc cactgcggcc
     9661 tgcacctggg cgtggccgac cgccagatcc aggccatcgg cgaagaaata atccagcccg
     9721 ggctggcggc tgaagcgctc ggcaatccag ccgtccggcg tcttcaccga gatgcccagc
     9781 ccgttgtcct cgcagacgaa caggaccggt gccggcagct tctggtaggc cgaccacatc
     9841 gccgtgttga acgcggtctg cgccgtggca tggttggccg aggcatcacc gaacgagcac
     9901 agcacgatgc tgtcggccgg gatcggcagc ggctgcccca gccgcttgcc actctcgatg
     9961 gccagcgcgg tccccagcgc cttgggcagg tgcgaggcga tcgtcgaggt ctgcggcagc
    10021 acccacaacg gcttgctgcc ccacaccttg tggcgcccgc cgctggccgg atcatcggcg
    10081 ctggcggcga aggacagcgc ggcatcacgc aacggatcga tgcccggcac ctgccgcgaa
    10141 cgctcggcca tgaaggcgcc ggaacgatag tgcaggaacg ccggatcggt atgccggctg
    10201 gcgcgtgcca gcagcgcgtt gccctcatgg ccggaggagc cgatggtgta gaaaaccttg
    10261 ttctgcacac gcagcacgcg tgccatcagg tccagctggc ggctggccag ctgcgagtcg
    10321 aacaggtcgg caaaggccgc ggcggtgagc gtgctgccag gcagtatcgg tgcatccggt
    10381 gccggccgct ggcgtggggt accgcgccag ccacgtaccg catcgaggaa attggcgtcg
    10441 cacacgtcgg cgcggttgag cacgcgcatg cgcgcgggaa tcggatctgg aaccacagca
    10501 aacatcgaac accctccgtg tcgttgttgc gttccgccgg gcgtggcccg gcgctaccct
    10561 gtggaactca cgcggcgtcg aagcgtgcac gcacctcggc ggtcaccgcc ggcatcggca
    10621 ggaagcgcgg ttgcccacgc acgcgctgca gccaggcgcg cacctcgggg aacggcgcca
    10681 ggtcgatgcc gccctcgcct gccacgtcgg tgtaggcgaa cagcgcgatg tcggcgatgc
    10741 cgtactcgct gccggtgaac cagggcgcct ggcgcaggtg ctgctccatc accgccagtg
    10801 cggtggcggc acgctcgtgc agcctcggca gttcagcgcg gcgtggcgaa tcgggggccg
    10861 tccagccacg gatgaagcgc gccaccgcca cgcacggctc atgcgtgtac tgctcgaaga
    10921 acatccagct caacgcctgc gcgcgctccc agccgtcgct gggcaggtac ggcgtgcctt
    10981 cggccagcca gaacaggatc gcattggact cggtcagcac gcggccgtcg tcacggacga
    11041 tcagcggcac cttggcattc gggttcagtg caaggaattc agcggtgtgg gtctggccat
    11101 gggcactgtc cacttccacc cagcggtagc ggctgccgag ctgctccagc agcaggcgta
    11161 ccttgtggca attgcccgag accgacatgc catgcaccgt caacgggacg cgctcttcca
    11221 ccatcgcctg ctccatcgga tccggccggc ggccggctgc gtgcagtctg gcaagcgcgc
    11281 cgatgattgc caagcgcggg tgcagcat
//
LOCUS       DAOKIP010000131        11086 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.131,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000131 DAOKIP010000000
VERSION     DAOKIP010000131.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 11086)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11086)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11086
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.131"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..2052)
                     /locus_tag="QEL58_002776"
     CDS             complement(<1..2052)
                     /locus_tag="QEL58_002776"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014038092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HDS1677226.1"
                     /translation="MLSGFDGLRFSHWHPEIRDDGVVVLSLDRQDSSVNAMSQDVLLE
                     LGDLLERIALDPPKGVVIQSLKKAGFIAGADLKEFQEFDRRGTVNDAIRRGQATYQKL
                     AELPCPTVAAIHGHCLGGGTELALACRYRVASNDTSTRIGLPETQLGIFPGWGGSARL
                     PQLVGAPAAMDMMLTGRTLSASAARGIGLVDKVVAPAVVLDTAVALALSGTTRPFKQR
                     ALAWATNTWPARQLLAPQMVKQVARKAKKDQYPAPYALISTWQRSGGKPIQARLDAER
                     RAVVKLASTPTARNLIRIFFLTERLKGLGGGDSGIRHVHVVGAGVMGGDIAAWAAYKG
                     FEVTLQDREQRFIDPAMERAQALFAKKVRDDSKRPAVAARLRADLDGNGVAEADLVIE
                     AIIENPEAKRALYQTLEPKMKHDALLTTNTSSIPLVELRDHIQRPAQFAGLHYFNPVA
                     QMPLVEIIHHDGMAPETERRLAAFCKALGKFPVPVAGSPGFLVNRVLFPYMLEAATAY
                     AEGIPGPVIDKAAVKFGMPMGPIELIDTVGLDVAAGVGRELAPFLGLQIPAALQTVEP
                     DKRGKKDGQGIYTWENGKPKKPDVASDYQAPADLEDRLILPLLNEAVACLHEGVVADA
                     DLLDAGVIFGTGFAPFRGGPIQHIRAVGADAIVERLKALQQRHGDRFAPRPGWDNPAL
                     RE"
     gene            2288..2908
                     /gene="rpoE"
                     /locus_tag="QEL58_002777"
     CDS             2288..2908
                     /gene="rpoE"
                     /locus_tag="QEL58_002777"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007962205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoE"
                     /protein_id="HDS1677227.1"
                     /translation="MAEVDTPQELDLELVRRVQRGESAAFDVLVRKYQHRVVALVGRY
                     IADWSECQDVAQDTFIRAYRAIGSFRGDAQFSTWLHRIAVNTAKNYLASHNRRPPTDD
                     IDIGDAEQFDSGTRLRDTDTPERELMRQELEQTVMKAVNALPEELRLAITLREVEGLS
                     YEDIAQKMGCPIGTVRSRIFRAREAIDTELRPLLDIGSATREKSRV"
     gene            2917..3798
                     /locus_tag="QEL58_002778"
     CDS             2917..3798
                     /locus_tag="QEL58_002778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010482817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anti-sigma factor"
                     /protein_id="HDS1677228.1"
                     /translation="MTSNPFNESQNHQSPAGQRLDQRHREQLSALVDGELGADEARFL
                     LRRMEHDPELAGCQERWQLLGDVMRGQAPALAPAGFSAAVAAAIAAEPAPQAEPRRQA
                     RRSGWRAWGGGAALAASVAAVALFMGGEKLQEAAPGEPLAPQVVASQAELAPAPSGPA
                     AVTEASVDTATMAVAAAPAVAMAAASRRQDSRRASATRSQQAARVAQRDDSPQRAVAA
                     AQAPLTPTVPANASRNLPFGEVGALQARPWPRSSLAPAAGGALNASFPAHAGGAAFYP
                     FEPRLQDDLPVPPRPRD"
     gene            3873..5408
                     /locus_tag="QEL58_002779"
     CDS             3873..5408
                     /locus_tag="QEL58_002779"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005414199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegQ family serine endoprotease"
                     /protein_id="HDS1677229.1"
                     /translation="MTPRLRTQAIGLLALTLPLMACAQAPAPAAQTQPAPAAAPRAPA
                     QPLVTGLPDFTHLVEQVGPGVVNVDTTIVRNNRQASRGPMGGDDDMPEFFRRFFGPDF
                     PMPGQGPGGQDGGPSIKGRGMGSGFIISPDGYVLTNYHVVADASEVKVKLGDSREFNA
                     KVVGSDQQYDVALLKIDGKNLPTVRVGDSNTLKPGQWVVAIGSPFGLDHSVTAGIVSA
                     LGRSTGGADQRYVPFIQTDVAINQGNSGGPLLNTRGEVVGINSQIFSASGGYMGISFA
                     IPIDLAMSAVEQIKKSGKVTRGQLGAVVEPIDSLKAQGLGLPDSRGALVNQIVAGSAA
                     EKAGVQIGDVVRSVNGSPVNSWSDLPPLIGAMAPGSRVTLGVIRDGKPRDLSATLTAL
                     SEDGQGSVRAAATAKPDAAPQAGANALLGLDVSDLTAPQRKQFGLDGNEGVRITGVKG
                     QAARDAGLSPGMVILQVGRTPVGSVDGLNRALSSYKKDDVVMLLVRTGNGNSAFVAVK
                     AGQ"
     gene            5589..7382
                     /gene="lepA"
                     /locus_tag="QEL58_002780"
     CDS             5589..7382
                     /gene="lepA"
                     /locus_tag="QEL58_002780"
                     /EC_number="3.6.5.n1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014038088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor 4"
                     /protein_id="HDS1677230.1"
                     /translation="MRNIRNFSIIAHVDHGKSTLADRIIQLCGGLQAREMEAQVLDSN
                     PIERERGITIKAQSVSLPYLAKDGQTYHLNFIDTPGHVDFSYEVSRSLAACEGALLVV
                     DAAQGVEAQSVANCYTAVEQGLEVVPVINKIDLPTADIERAKAEIEAVIGIDASDAVP
                     VSAKTGLNVQDVLEAIVHRIPPPTPRDTEKLQALIIDSWFDNYLGVVSLVRVMQGEIK
                     PGDKLQVMSTGRNHQVDNVGVFTPKRKVLPALRAGEVGWVTASIKDVHGAPVGDTLTL
                     AGDPAPKPLPGFQEMQPRVFAGLFPVDAEDYPDLREALDKLRLNDAALRFEPESSEAM
                     GFGFRCGFLGMLHMEIVQERLEREYNLDLISTAPTVVYEVLKTDGSIINMDNPAKLPP
                     VNQVEEIREPIIRANVLTPEEYIGNIIKLCEEKRGSQIGINYLGSQVQISYELPMAEV
                     VLDFFDKLKSVSRGYASLDYHFVRFDAGPFVRVDVLINGDKVDALSLIVHRSHADRRG
                     RELCEKMKDLIPRQMFDVAIQAAVGSQIIARTTVKAMRKNVLAKCYGGDVSRKKKLLE
                     KQKEGKKRMKQVGRVEIPQEAFLAVLQMDNK"
     gene            7437..8231
                     /gene="lepB"
                     /locus_tag="QEL58_002781"
     CDS             7437..8231
                     /gene="lepB"
                     /locus_tag="QEL58_002781"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006382890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HDS1677231.1"
                     /translation="MKLFEILLVVLTLASGLILLADKLYLAKRRAQRAGLLDSEPVLV
                     DYSRAFFPVLAIVLIVRSFIAEPYKIPSSSMMPNLLIGDFILVNKFSYGLRLPISNTK
                     IVPFGEPSRGDVVVFHFPGHSDNDPAKGENFIKRVIGVPGDTIVFEGDGVILNGEPLK
                     YDNKGIYAGHKGQGEGANLLVEHLPGRTHTVLETDYPRGQGQWTVPAGKYLVMGDNRD
                     NSDDGRFWGLLPEENLRGKAFLIWLNCQGWFCKDGFEPSRIGSSIN"
     gene            8284..8667
                     /locus_tag="QEL58_002782"
     CDS             8284..8667
                     /locus_tag="QEL58_002782"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010482821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4845 domain-containing protein"
                     /protein_id="HDS1677232.1"
                     /translation="MKTMNTQRGMTLTSFLTVLIVVGFFLYIGMKLFPMYQEYYAVRS
                     AMKSLANEPGVGNMEPARIQDLFFKRLYINYSDNVKPANVKFDRRDNGWTLKVNYEVR
                     RPLIGNLDVVGNFDSSQDLTRSGAQ"
     gene            8657..9337
                     /gene="rnc"
                     /locus_tag="QEL58_002783"
     CDS             8657..9337
                     /gene="rnc"
                     /locus_tag="QEL58_002783"
                     /EC_number="3.1.26.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019662167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease III"
                     /protein_id="HDS1677233.1"
                     /translation="MPSKFIQRGDLIGHPFRDAALLKQALTHRSAGAPHNERLEFLGD
                     SIVNMMAAEALYRRWPKADEGAMTRARAELVREGALAVIGRSLELGERLTLGPGEMKS
                     GGHRRDSILADAVEAVVAAIYLDAGFEACRAVVLPWFSASIEALPASGRPEKDPKTRL
                     QEWLQARQKALPQYELVSESGDDHAKHFRVRCNVADPAASTEGEGASRRLAEQQAAAA
                     VLEQLDSK"
     gene            9334..10230
                     /gene="era"
                     /locus_tag="QEL58_002784"
     CDS             9334..10230
                     /gene="era"
                     /locus_tag="QEL58_002784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005921522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase Era"
                     /protein_id="HDS1677234.1"
                     /translation="MSEQTPHHCGSVAVIGRPNVGKSTLTNALVGAKVSIVSNRPQTT
                     RHRLLGIATYPEGQLVLVDTPGLHKVQKRAMNRVMNRAARGSLEGVDAGLLVIEAGRW
                     DEEDSLAFNVLRDAGIPVVLVVNKIDRLKEKGALLPFLQQVTEGRDFAAVHPISAQKR
                     NGLEALVRDVLKLLPEAPPMFGEDEITDRSQRFLAGELVREQLMRQLGEELPYATTVE
                     IERFTEDGNLLRIGAVIWVEREGQKAIVIGKGGARLKEIGAKSRLQMERLFGAKVFLE
                     TWVRVREGWSDDEAALKAFGYE"
     gene            10249..10968
                     /gene="recO"
                     /locus_tag="QEL58_002785"
     CDS             10249..10968
                     /gene="recO"
                     /locus_tag="QEL58_002785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecO"
                     /protein_id="HDS1677235.1"
                     /translation="MMIEDDTGFVLHARAYRETSLLVEVLSAQHGRIGLLARGVSTAK
                     GQVLRAALQPLQWIRFSAQQRGELAQLRAAEALDAAPRLVGQAMLAGFYLSELTLRLA
                     PRQDPLPELYLAYGEARARLAVGAGLAWTLRRFERELLSALGLGFELDSASDGQPVDP
                     AARYALDPQEGPQRLLSERGGERQAAATGSALLALAADEEPEAADLASLRLPMRRVLA
                     HHLGPRGLKSWELLEQLAPRR"
BASE COUNT         1860 a         3676 c         3802 g         1748 t
ORIGIN      
        1 ttcgcgcagg gccgggttgt cccagcccgg gcgcggcgcg aaacgatcgc catggcgctg
       61 ctgcaacgcc ttcagccgct cgacgatcgc atcagcaccc accgcacgga tgtgctggat
      121 cggaccaccg cggaacggcg cgaacccggt gccgaagatc acgccggcat ccagcaggtc
      181 cgcgtcggcc accacgcctt cgtgcaggca ggccaccgcc tcgttcaaca gcggcaggat
      241 caggcggtcc tccaggtcgg ccggggcctg gtaatcgctg gccacgtccg gcttcttcgg
      301 cttgccgttc tcccaggtgt agatgccctg gccatccttc ttgccgcgct tgtccggttc
      361 caccgtctgc agcgccgccg gaatctgcag gcccaggaac ggcgccagtt cacggccgac
      421 accggcggcc acgtccaggc cgacggtgtc gatcagttcg atcgggccca tcggcatgcc
      481 gaacttcacc gcggccttgt cgatcaccgg gcccggaatg ccttcggcat acgcggtggc
      541 cgcttccagc atgtacggga acagcacgcg gttgaccagg aagcccgggc tgccggccac
      601 cggcaccggg aatttgccca gcgccttgca gaacgcggcc aggcggcgct cggtttccgg
      661 cgccatgccg tcgtgatgga tgatttccac cagcggcatc tgcgccaccg ggttgaagta
      721 atgcaggccg gcgaactgcg ccgggcgctg gatgtggtcg cgcagttcca ccagcggaat
      781 cgacgaggtg ttggtggtca gcaacgcgtc gtgcttcatc ttcggctcaa gcgtctggta
      841 cagcgcacgc ttggcctccg ggttctcgat gatggcctcg atcaccagat cggcctcggc
      901 cacgccgttg ccgtccaggt cggcacgcag gcgcgcagcc accgccgggc gcttgctgtc
      961 gtcgcgcacc ttcttggcga acagtgcctg cgcacgctcc atggccgggt cgatgaagcg
     1021 ctgctcgcgg tcctgcaggg tcacttcgaa gcccttgtag gcggcccacg cagcgatgtc
     1081 gccgcccatc acgccggcac cgaccacgtg cacgtggcgg atgccggaat cgccgccgcc
     1141 caggcccttc aggcgttcgg tcaggaagaa gatgcggatc aggttgcgcg cggtcggcgt
     1201 gctggccagc ttcaccacgg cgcggcgttc tgcatccagg cgcgcctgga tcggcttgcc
     1261 gccgctgcgc tgccaggtgc tgatcagcgc gtacggcgcc gggtactggt ccttcttcgc
     1321 cttgcgcgcg acctgcttga ccatctgcgg cgccagcagc tggcgtgccg gccaggtatt
     1381 ggtggcccag gccagcgcac gctgcttgaa cggacgggtg gtgccggaca gcgccagcgc
     1441 gacggcggtg tcgagcacga ccgccggggc caccaccttg tcgaccaggc cgataccgcg
     1501 tgccgccgag gccgacaggg tacggccggt cagcatcatg tccatcgccg ccggggcgcc
     1561 gaccagctgc ggcaggcgcg cgctgccgcc ccagcccggg aagatgccca gctgggtttc
     1621 cggcaggccg atgcgggtgc tggtgtcatt ggaggccacg cggtagcggc aggccagcgc
     1681 cagctcggta ccgccgccca ggcagtggcc gtggatggcc gccacagtcg ggcagggcag
     1741 ctcggccagc ttctggtagg tggcctggcc gcggcggatc gcatcgttga cggtgccgcg
     1801 gcggtcgaat tcctggaact ccttcagatc cgcgccggca atgaagccgg ccttcttcag
     1861 cgactggatc accacgccct tcggcgggtc cagcgcgatg cgctcaagca gatcgcccag
     1921 ttccagcagc acgtcctgcg acatcgcgtt gacgctgctg tcctgacgat ccagggagag
     1981 aaccaccacg ccgtcgtcgc ggatctcggg gtgccagtgg ctgaagcgga gaccatcgaa
     2041 gcctgaaagc atggacgttc catccggttg tgtatggaga agcggctatg atccagaggt
     2101 tgtttccccc gcgtcaaatc ccaatagcag gggagtggcg accccggatc catggccgtg
     2161 gaccgggacg ctaacggaac ggtggttaaa agctggtgcg gcgccaggtg atcggcgact
     2221 gaacttttcc cgggattggc agtctcattg cccgacgtcg gttgggctga caggagtgcg
     2281 gcccctcatg gccgaggttg atacaccaca ggagctggat ctggaactgg tccggcgtgt
     2341 gcagcgcggt gagagcgcgg cgttcgatgt cctggtacgc aagtaccagc atcgggtcgt
     2401 ggccctcgtc ggtcgctaca tcgccgactg gagcgaatgt caggacgtcg cccaggacac
     2461 tttcatccgt gcgtaccgcg cgatcggaag tttccgtggt gatgcccagt tctcaacctg
     2521 gttgcatcga atcgccgtga ataccgccaa aaactacctg gcttcacaca atcgacggcc
     2581 gccgaccgat gacatcgaca tcggcgacgc cgaacagttc gacagcggca cgcgcctgcg
     2641 cgacaccgac acgcccgaac gcgagttgat gcgccaggag ctggaacaga cggtgatgaa
     2701 ggccgtcaac gcgctgccgg aggaactccg gttggcgatc accctgcgcg aggtggaagg
     2761 cctgagttac gaggatatcg cgcagaagat ggggtgcccg atcggcaccg tgcgttcacg
     2821 gatcttccgg gcgcgcgagg cgatcgacac cgaactccgg ccgctgttgg acatcggcag
     2881 cgccacccgt gagaagagcc gcgtatgacc agcaatctga ccagcaatcc gttcaacgaa
     2941 tcgcagaacc atcaatcccc tgccgggcag cgcctggacc agcgccaccg cgaacagctg
     3001 tcggccctgg tcgacggcga gctgggcgcc gatgaagcgc gcttcctgtt gcgccgcatg
     3061 gagcatgatc cggagctggc gggttgccag gaacgctggc agctgctggg cgacgtgatg
     3121 cgcgggcagg ccccggcact ggccccggcc ggcttcagtg ccgccgtggc ggctgccatc
     3181 gcggccgaac cggcaccgca ggccgagccg cgccgccagg cgcgtcgcag cggctggcgg
     3241 gcctggggcg gtggtgccgc actggccgcc tcggtcgctg ccgtggccct gttcatgggc
     3301 ggcgagaagc ttcaggaggc cgcccccggc gagccgctgg caccgcaggt ggtcgccagc
     3361 caggctgaac tggcgccggc accgagcggc ccggctgcgg tcaccgaggc gtcggtggat
     3421 accgcaacga tggccgtggc ggctgcgccg gcggtggcaa tggccgcggc cagccgccgc
     3481 caggacagcc gtcgcgccag cgcgacccgc agccagcagg ccgcgcgcgt cgcccagcgt
     3541 gatgacagcc cgcagcgtgc ggtggccgcc gcgcaggcgc cgttgacccc gacggtgccg
     3601 gccaacgcca gccgcaacct gccgtttggc gaggtgggag cactgcaggc gcgaccgtgg
     3661 ccccgctcca gcctggcccc cgcggcgggt ggcgcgctca atgccagctt cccggcccac
     3721 gccggtggtg ctgcgttcta cccgttcgag ccgcgcctgc aggatgacct gccggtgccg
     3781 ccgcgcccgc gcgactgagt cgggcgcttt cacgccccgc cgtcggcggg gcccgtattc
     3841 ctctttccac ccgatccgga ggttgccgtc cgatgactcc ccgactccgc acgcaggcca
     3901 tcggcctgct ggccctgacc cttcccttga tggcctgcgc ccaggcgccg gcgcctgcgg
     3961 cgcagaccca gcccgcgccg gctgcggcgc cgcgggcgcc cgcgcagccg ctggtcaccg
     4021 gcctgcctga cttcacccac ctggtcgaac aggtcgggcc gggcgtggtc aacgtcgaca
     4081 ccaccatcgt gcgcaacaac cgccaggcct cgcggggccc gatgggcggc gacgatgaca
     4141 tgcccgagtt cttccgccgc ttcttcggcc cggacttccc gatgccgggg caggggccgg
     4201 gtggccagga tggcggtccc agcatcaagg gccgcggcat gggctcgggt ttcatcatct
     4261 cgcctgacgg ttatgtgctg accaactacc acgtggtggc cgatgccagc gaggtgaagg
     4321 tgaagctggg tgacagccgc gagttcaacg ccaaggtggt gggcagcgac cagcagtacg
     4381 acgtggccct gctgaagatc gacggcaaga acctgccgac cgtgcgcgtg ggggattcca
     4441 acaccctgaa gccgggccag tgggttgtcg cgatcggctc gccgttcggc cttgatcact
     4501 cggtcaccgc gggcatcgtc agtgcgctgg gccgcagcac cggtggcgcc gaccagcgct
     4561 acgtgccgtt catccagacc gacgtggcga tcaaccaggg caactccggc ggcccgctgc
     4621 tgaacacccg cggtgaagtg gtcggcatca actcgcagat cttctccgcc tccggtggct
     4681 acatgggcat cagcttcgcg atcccgatcg acctggcgat gagcgcggtc gagcagatca
     4741 aaaagagtgg caaggtcacc cgtggccagc tgggtgcggt ggtcgaaccg atcgattcgc
     4801 tgaaggcgca gggcctgggc ctgccggaca gccgtggtgc gctggtcaac cagatcgtgg
     4861 ccggcagtgc ggccgagaag gccggcgtac agatcggtga cgtggtgcgc tcggtcaacg
     4921 gcagcccggt caacagctgg tcggacctgc caccgctgat cggtgcgatg gcaccgggca
     4981 gccgggtcac cctcggcgtg atccgcgatg gcaagccgcg cgacctcagc gcaacgctga
     5041 ccgcgctcag tgaagatggc cagggcagtg tccgcgcggc cgccacggcc aagcccgatg
     5101 cggcgccgca ggccggggcc aatgccctgc tgggcctgga cgtcagcgac ctgaccgcgc
     5161 cgcaacgcaa gcagttcggc ctggacggca acgagggcgt gcgcatcacc ggggtcaagg
     5221 gccaggcggc gcgtgatgcc ggcctgtctc cgggcatggt gatcctgcag gtcgggcgca
     5281 ccccggttgg cagcgtggat ggcctcaacc gcgcgctgtc cagctacaag aaggacgatg
     5341 tggtgatgct gctggtgcgt accggcaacg gcaacagcgc gttcgtggcg gtgaaggccg
     5401 gccagtaagg cctgccaggg ccgctgctgc ggcggcggcc atctgccccg aagccccgcc
     5461 ctggcggggc ttcggccgtt ccgggcgggc ccgacgaggc ggttttcgcg gcgaggcgcc
     5521 gggcatgcga taatcgaccg ttaccctgac gacgccgcgc gccgccgcca cctatgtctt
     5581 ctgattcgat gcggaacatc cgcaacttct ccatcattgc ccatgtcgac cacggcaagt
     5641 ccacgctggc cgaccgcatc atccagctct gcggtggcct gcaggcccgt gagatggaag
     5701 cgcaggtgct cgactccaac ccgatcgagc gcgagcgtgg catcacgatc aaggcgcagt
     5761 cggtgtcgct gccgtacctg gccaaggacg ggcagaccta ccacctgaac ttcatcgata
     5821 ccccgggcca cgtcgacttc tcctatgaag tcagccgctc gctggccgcc tgcgagggcg
     5881 cgctgctggt cgtcgatgcc gcccagggcg tggaagcgca gtcggtggcc aactgctaca
     5941 ccgcggtcga gcagggcctg gaagtggtgc cggtgatcaa caagatcgac ctgcccaccg
     6001 ccgacatcga gcgcgccaag gccgaaatcg aggccgtgat cggcatcgac gcctctgacg
     6061 ccgtgccggt cagcgccaag accggcctga acgtgcagga cgtgctggaa gcgatcgtgc
     6121 accgcatccc gccgccgacg ccgcgcgaca ccgagaagct gcaggcgctg atcatcgact
     6181 cgtggttcga caactacctg ggcgtggtct cgctggtgcg cgtgatgcag ggcgagatca
     6241 agcccggtga caagctgcag gtgatgtcca ccggccgcaa ccaccaggtc gacaacgtcg
     6301 gcgtgttcac gccgaagcgc aaggtgctgc cggcgctgcg tgccggtgaa gtgggctggg
     6361 tcaccgccag catcaaggac gtgcacggcg cgccggtcgg cgacaccctg accctggccg
     6421 gcgacccggc accgaagccg ctgccgggct tccaggaaat gcagccgcgc gtgttcgccg
     6481 gcctgttccc ggtggacgcc gaggattacc cggacctgcg cgaagcgctg gacaagctgc
     6541 gcctgaacga tgccgcgctg cgtttcgagc cggaaagctc cgaggcgatg ggcttcggct
     6601 tccgctgcgg cttcctcggc atgctgcaca tggagatcgt gcaggagcgc ctggagcgcg
     6661 aatacaacct ggacctgatc agcaccgcgc cgacggtggt gtatgaggtg ctgaagaccg
     6721 atggctcgat catcaacatg gacaacccgg ccaagctgcc gccggtgaac caggtcgagg
     6781 agatccgcga gccgatcatc cgtgccaacg tgctcacccc cgaggagtac atcggcaaca
     6841 tcatcaagct gtgcgaagaa aagcgcggca gccagatcgg catcaactac ctgggcagcc
     6901 aggtgcagat cagctacgag ctgccgatgg ccgaagtggt gctggacttc ttcgacaagc
     6961 tgaagtcggt cagccgtggc tatgcctcgc tggactacca cttcgtgcgt ttcgacgccg
     7021 gcccgttcgt gcgtgtggac gtgctgatca acggcgacaa ggtcgatgcg ttgtcgctga
     7081 tcgtgcaccg cagccatgcc gatcgccgcg gccgcgagct gtgcgagaag atgaaggacc
     7141 tgatcccgcg ccagatgttc gacgtggcca tccaggccgc ggtcggctcg cagatcatcg
     7201 cccgtaccac ggtcaaggcc atgcgcaaga acgtgctggc caagtgctat ggtggcgacg
     7261 tttcgcgcaa gaagaagctt ctggaaaagc agaaggaagg caagaagcgc atgaagcagg
     7321 tcggccgcgt ggaaatcccg caggaagcgt tcctggccgt gctgcagatg gacaacaagt
     7381 aagcccgcac cggcccctgc gggccggtcg tctggtgacg ttgcaaagga ccctgaatga
     7441 aactgtttga gatcctcctg gtcgtgctga ccctggcctc gggcctgatc ctgctcgcgg
     7501 acaagctgta cctcgccaag cgccgcgccc agcgtgcggg cctgctcgat tccgagccgg
     7561 tgctggtgga ctactcgcgt gcgttcttcc cggtgctggc gatcgtgctg atcgtgcgca
     7621 gcttcatcgc cgagccgtac aagatcccgt ccagctcgat gatgccgaac ctgctgatcg
     7681 gcgacttcat cctggtcaac aagttctcct acggcctgcg cctgccgatc agcaacacca
     7741 agatcgtgcc gttcggcgag ccgtcgcgtg gcgacgtggt ggtgttccac ttccccggcc
     7801 acagcgacaa cgacccggcc aagggcgaga acttcatcaa gcgcgtgatc ggcgtgccgg
     7861 gtgacaccat cgtcttcgag ggcgacggcg tgatcctcaa tggcgagccg ctgaagtacg
     7921 acaacaaggg catctatgcc ggccacaagg gccagggcga gggcgccaac ctgctggtcg
     7981 agcacctgcc gggccgcacc cataccgtgc tggagaccga ctatccgcgt ggccagggcc
     8041 agtggaccgt gccggccggc aagtacctgg tgatgggcga caaccgtgac aacagcgatg
     8101 acggccgttt ctggggcctg ctgccggagg aaaacctgcg cggcaaggca ttcctgatct
     8161 ggctgaactg ccagggctgg ttctgcaagg atggcttcga gccgtcgcgg atcggctcga
     8221 gcatcaactg atcgggcatc acctgagtat tttcacatcc aacgcgtatc tggggagaac
     8281 gcaatgaaga cgatgaacac gcagcgcggc atgaccctga cctcgttcct gacggtcctg
     8341 atcgtggttg gcttcttcct ctacatcggc atgaagctgt tcccgatgta ccaggagtac
     8401 tacgcggtgc gctcggcgat gaagagcctg gccaacgagc cgggcgtggg caacatggag
     8461 ccggcccgca tccaggacct gttcttcaag cgcctgtaca tcaactactc ggacaacgtg
     8521 aagccggcca atgtgaagtt cgatcgtcgc gacaacggct ggaccctcaa ggtcaactac
     8581 gaagtacgtc gtccgctgat cggcaacctc gatgtggttg gcaattttga ttcttcccag
     8641 gacctgacac gaagcggtgc ccagtaaatt catccaacgt ggcgacctga tcggtcatcc
     8701 cttccgcgat gcggccctgc tcaagcaggc gctgacccat cgcagtgcgg gtgcgccgca
     8761 caacgagcgc ctggagttcc tcggcgacag catcgtcaac atgatggcgg ccgaggcgtt
     8821 gtaccggcgc tggcccaagg ccgacgaagg cgcgatgacc cgtgcccgcg ccgagctggt
     8881 gcgtgaaggc gcgctggcgg tgatcgggcg cagcctggag ctgggcgagc ggctgacgct
     8941 gggccctggc gaaatgaagt ccggcggtca tcgccgcgac tcgatcctgg ccgacgcggt
     9001 ggaagcggtg gtggccgcga tctacctgga tgccggtttc gaggcctgcc gggcggtggt
     9061 actgccctgg ttcagcgctt cgatcgaggc actgccggcc tccggccggc ccgagaagga
     9121 ccccaagacc cgcctgcagg aatggctgca ggcccgacag aaggcgttgc cgcagtacga
     9181 gctggtgtca gaatccggtg acgatcacgc caaacacttc cgggtacgct gcaacgtagc
     9241 tgacccggcc gccagcaccg agggcgaagg cgcctcgcgg cggcttgccg aacaacaggc
     9301 ggctgcggcc gtcctagaac aactggattc caagtgagcg aacaaactcc ccatcattgc
     9361 ggcagtgtgg ccgtcatcgg ccgcccgaac gtgggcaagt cgaccctgac caatgccctg
     9421 gtcggcgcca aggtcagcat cgtctccaac cgcccgcaga ccacgcgcca tcgcctgctg
     9481 ggcatcgcca cgtatccgga aggccagctg gtgctggtcg acacccccgg cctgcacaag
     9541 gtgcagaagc gggcgatgaa ccgggtgatg aaccgcgccg cgcgtggctc gctggaaggc
     9601 gtcgacgccg gcctgctggt gatcgaagcc gggcgctggg acgaagaaga cagcctggcc
     9661 ttcaacgtgc tgcgcgatgc cggcatcccg gtggtgctgg tggtcaacaa gatcgatcgc
     9721 ctgaaggaaa agggcgcgct gctgccgttc ctgcagcagg tgaccgaagg ccgcgacttc
     9781 gccgccgtgc atccgatttc cgcacagaag cgcaatggcc tggaagcgct ggtgcgagac
     9841 gtgctgaagc tgctgccgga agccccgccg atgttcggcg aggacgagat caccgaccgc
     9901 agccagcgtt tcctggctgg cgaactggtg cgcgagcagc tgatgcgcca gctcggcgaa
     9961 gaactgccgt acgccaccac ggtggagatc gagcgcttca ccgaagacgg caacctgctg
    10021 cgcatcggtg cggtgatctg ggtcgagcgc gaaggccaga aggccatcgt gatcggcaag
    10081 ggtggtgcgc gcctgaagga gatcggtgcc aagtcccgcc tgcagatgga gcgcctgttc
    10141 ggggccaagg tgttcctgga aacctgggtg cgcgtgcgtg aaggctggtc cgatgacgag
    10201 gccgcgctga aggccttcgg ctacgagtaa gccgcgacgg tcgcttcgat gatgatcgag
    10261 gacgacaccg gcttcgtgct gcatgcacgg gcctatcgcg agaccagcct gctggtggag
    10321 gtattgagcg cgcagcatgg ccgcatcggc ctgctcgcgc gcggtgtttc aacggcgaag
    10381 gggcaggtgc tgcgcgctgc cctgcagccg ttgcagtgga tccgtttcag cgcccagcag
    10441 aggggtgaac tggcgcaact gcgcgctgcc gaggcgctgg atgccgcgcc gcgattggtt
    10501 ggccaggcga tgctggccgg cttctacctg agtgaactga ccctgcgcct ggcccctcgc
    10561 caggacccgt tgccggagct gtacctcgcc tacggtgagg cacgcgcgcg gctggcggtc
    10621 ggtgccggcc tggcctggac cctgcgtcgt ttcgaacgcg aactgctgtc ggcgctgggc
    10681 ctgggtttcg aactggacag cgccagcgac ggccagccgg tcgacccggc tgcacgctat
    10741 gcgttggacc cgcaggaagg gccgcaacgg ctgctgagcg agcgtggcgg cgagcgccag
    10801 gcggcggcca caggctcggc gctgctggcg cttgccgccg acgaggagcc cgaggcggcc
    10861 gacctggcca gcctgcggct gccgatgcgg cgggtgctgg cccatcatct ggggccgcga
    10921 ggcctgaagt cctgggaact gctcgagcag ctcgccccca ggcgttgagg ggtgtccggc
    10981 agggcttgca gccctgcacc cggcgaatca acgtcaacgt caactgcaaa agctggctat
    11041 ccgtgggtag gcggggtggg tccggtagcg ggagacgccg taaacc
//
LOCUS       DAOKIP010000132        11075 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.132,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000132 DAOKIP010000000
VERSION     DAOKIP010000132.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 11075)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11075)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11075
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.132"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(6..1517)
                     /locus_tag="QEL58_002786"
     CDS             complement(6..1517)
                     /locus_tag="QEL58_002786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014648431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HDS1677236.1"
                     /translation="MPLTGPALGALRILLVEDSPEDAELMSEQMLDAGLDARFERVES
                     EAELRQALAAFQPDIVLSDLSMPGFSGDDALRIVRETSPEVPFIFVSGTMGEENAVAA
                     LQKGANDYIIKHQPARLPSAVARSIRDARSAVERARVETELMRAQRLESLSLLAAGLS
                     HDLRNILQPLLIMPDLLKARTEDPQLHHLADVIAECGRRGHEMAESMLSFVRGSRKPS
                     ERIEIDGLFDAVALLLRSNVPDAVRLELQVQDQGLVVDANYTELQQVMLNLALNAIQA
                     MPNGGRLSLIASHAGQRDGVDWMHIRVADEGIGMDADTLSHLFNPFFTTKADGTGLGL
                     MSCKRIVEGAGGSIHVSSQPGQGTCFELRLPMHEASDGSEPIEQLVALGSGQSILVVD
                     GEATRLSLLGNALSSQGYQLQLASDGPAALRWMQQEAMPALVIADAGSKLLPASQLLG
                     EMAALGYRGPALVLEDTTAAVAPDAFPPGVEVHVLRKPLQMQQVFRAVAEALG"
     gene            complement(1522..1962)
                     /locus_tag="QEL58_002787"
     CDS             complement(1522..1962)
                     /locus_tag="QEL58_002787"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002804768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HDS1677237.1"
                     /translation="MTTLRTILLAEDSPADAEMAIDALEEARLANPIVHVEDGVEVMD
                     YLLRRGAFANREEGLPAVLLLDIKMPRMDGLEVLRQIREHEELKRLPVVILSSSREES
                     DLARSWDMGVNAYVVKPVDVDQFFGAVQTLGKFWALINQAPELE"
     gene            complement(1959..3776)
                     /locus_tag="QEL58_002788"
     CDS             complement(1959..3776)
                     /locus_tag="QEL58_002788"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005414500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HDS1677238.1"
                     /translation="MALVFSDDIWDRWRLPALALAAVAIIVVPWLTLRKLQQDSEQAM
                     AWVNHTQAVGNALQQLQADVRDVESAALTLSKGVDAPGLRERMARANEIPGRLAELGR
                     MTRDNPDQLIRIGRIESMLEGRMALARELARSEPNSDQRGLVQDLSTRYPIRGLVEEL
                     QASEQELLALRAEQAARQRRQTEFVSWSSLVVQLALLGLVLWLLHRQIGRRLHAERQS
                     LRSAARAASVLQTVREPIVLLDRELRVQLHNPAFAELYGLEDERADGLLLETVGDGAW
                     QDPVMRQRLSDVLLRGRELWDFEHEQRAADGMVRYMLLNARRMPLPDTDDEVVLMTVS
                     DVTVQRAVQLRVEDLNRQLEGKVAQVSEVNRELEAFSYSVSHDLRAPLRHVAGFSDKL
                     SRHLGEQADDKSRHYLEVISSSARRMAALIDDLLVYSRLGRVAMRQQAVDMQSLVADT
                     RAMLDSNLQAEAENSGHAHQVEWSIAPLPIVVGDENMIRQVWLNLLGNAVKYSGNREP
                     ARIRVDCQQQPDGGHQFTVSDNGAGFDMAYAGKLFGVFQRLHKASDYPGTGIGLASVR
                     RVLTRHGGRIWAEAEPDVGATFHFYLPPAIDADKQGPSA"
     gene            complement(3981..4364)
                     /locus_tag="QEL58_002789"
     CDS             complement(3981..4364)
                     /locus_tag="QEL58_002789"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005411059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BON domain-containing protein"
                     /protein_id="HDS1677239.1"
                     /translation="MSNTTRTLIASALTLGLALSSSAAFAKDPAAKSPPTSTHPATHA
                     DRHDSNEPVTDTWITTKVKADLLASSNVPGTEIKVETVNGVVSLSGAVATQAEKDKAV
                     TTAKGIKGVTRVDAAALKVSAAAKR"
     gene            4536..5579
                     /locus_tag="QEL58_002790"
     CDS             4536..5579
                     /locus_tag="QEL58_002790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005414501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase"
                     /protein_id="HDS1677240.1"
                     /translation="MRPDLQLALIGYGLAGRVFHAPLIQHTPGLVLHSVVSSQRDTLL
                     RTFSNVHVRATPQQVFDDPAVDAVVIATPNEQHAPLAIAALAAGKHVLVDKPFALDVT
                     EAEAILAAARDAGRIATVFQNRRFDADFLTLQALLAEGALGDVAECHAHFDRYRPQVR
                     ERWREQDGPGSGVWYDLGPHLLDQMLVLFGWPEAIDADLAVQREGGSGIDYFHAVLHY
                     PRHRAIVHAGSLVAAPTPRFTVHGSTGSWIKHGLDVQEAQLRRGVAPGAPGWGIDPRH
                     GELLRCDAEDNVQRGTVDNLPGDYRRLYAQFAAAMHGDGEATVSAAQALQLMRLLQAG
                     MDSARDGRRIALG"
     gene            complement(5800..6705)
                     /gene="gnd"
                     /locus_tag="QEL58_002791"
     CDS             complement(5800..6705)
                     /gene="gnd"
                     /locus_tag="QEL58_002791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008264500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="decarboxylating 6-phosphogluconate
                     dehydrogenase"
                     /protein_id="HDS1677241.1"
                     /translation="MDIAMIGLGRMGANMAQRLHRGGHRVVGYDPGEGARQRAAEAGL
                     EVVDSLAAAVAALPVPRVVWLMVPAGETVDQTLGQLTPHLAEGDIVIDGGNSNYQDSI
                     RRAKALAEDDLGYVDCGTSGGVWGLQEGYSLMVGGDAPVVEQIAPLLRTLAPAEDRGW
                     ARVGPSGAGHFTKMVHNGIEYGMMQAYAEGFALMERKQEMELDLAQVAEVWRHGSVVR
                     SWLLDLSTEALKRNPSLDGIAPYVEDSGEGRWTVAEAIALDVPAPVITLSLLERLRSR
                     ESNSFTDRLLSAMRNEFGGHAIKKS"
     gene            complement(6716..7948)
                     /locus_tag="QEL58_002792"
     CDS             complement(6716..7948)
                     /locus_tag="QEL58_002792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014038508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677242.1"
                     /translation="MALLLVPVLGTAATPVDCTQGLLQRLGWRFEEAAVTTPQVHGGA
                     VCTRATLAEAQAAGDLRVQWPAAMPAAARQAQLRELLDNPATVCAYAFELGAATQRAA
                     TALQDNPTFRFSGPQLGWIGFGVKGAGAQGWQRTRSFGRGYVPSAGNSRALQTFYSGS
                     VRAECGVGRQVAQLATQRELYGDAAFDTEFKPAELSIGTFLALHDTDSILLGASAGDF
                     FADGKAVRTSMMGRQAFVGVPGFIEHVYDKGTLDDLSNQAENFVVVEVGEGAAQALAL
                     HGGLAWYDQRNVELWKLAQDIPRIGQRYFERLLFERDPDLRARLEPRYHDTLARMDQL
                     LDDPFYQQFVIYVHPRGIRPIGYHVARLLDRNPRTPFSIDLAVHNLHTTLYRRWREAQ
                     LRHCAATGRPGSLTLDPN"
     gene            complement(7972..8571)
                     /locus_tag="QEL58_002793"
     CDS             complement(7972..8571)
                     /locus_tag="QEL58_002793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010480975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2242 domain-containing protein"
                     /protein_id="HDS1677243.1"
                     /translation="MRASRLSNAAVALASALILSACGGRAADSTLLRESFDSGDTFSR
                     TVDGRPGDACEAARRTLLSQGYAIARSDEAQVEGNKNFQPRDDDHEQLVLRISCAPRG
                     SQTLVFVSAVQDRYALKKSPTSASVGVGALGSVSLPFGSNDDSLVKVASSTVTDAEFY
                     RRFFQRLQQYLPADAATPAPPASPVPATPEPAPASRDQG"
     gene            complement(8759..10936)
                     /locus_tag="QEL58_002794"
     CDS             complement(8759..10936)
                     /locus_tag="QEL58_002794"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010480977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxy terminal-processing peptidase"
                     /protein_id="HDS1677244.1"
                     /translation="MKFKAPAFLMALALVAPLALAAKADSPALPAAATADQVTTSKLV
                     YGLLSDSRYAYRPRALDEATSKDVFKRYLETLDGGKQYFTQADVARFAPFEANISSAI
                     RGGELEPAFQVFAVYKQRVGERVAYARKLLKQEPDFTTDERFEYDRKKVPWAASSAEL
                     DELWRKSVKNDWLRLKLAGKKPDDIRKTLDKRYATLEKSVNELKGEDVFQFFMNSYTS
                     AVDPHTDYFTPRTAENFNQAMSLSLEGIGAQLQRQDDVVVIREIIAGGPAAVDGTLKP
                     GDRIVGVGQGKSGLVEDVIGWRIDDVVAKIRGAKDTQVKLEFIPAAEGADGKHHTLVL
                     TRQKVRLAEQAAKGETMTIPAANGEPARKVGVIKLPTFYQDFEGRRRNAADYASATRD
                     VAKLLAGFKNDKLDGVVLDLRNNGGGSLDEAIELTGLFIEQGPVVQVRESGGRVTVNS
                     DRNQGVAWDGPLAVLINRGSASASEIFAGAIQDYGRGLVIGETSFGKGTVQNIVDLDR
                     WPSGETQRFGQVKLTIAQFFRISGSSTQHKGVVPDLAFPASVDATEFGESTYDNALPW
                     TRIAAVPHTQYGNFAPLLPKLETRHDARIATDKEFQWWNEDVQQFRTEAAKKYISLNE
                     ATRRAERERQDAQRKERQVQRKELGLALDPLADDSSDDGLTGNERDIVKDAAREKAAE
                     KRPDPLLRESASILADAVNLLANDRPLSAQVLPQSTGAGRWAD"
BASE COUNT         1745 a         3744 c         3676 g         1910 t
ORIGIN      
        1 aggcatcagc ccagcgcttc ggccaccgcg cggaatacct gctgcatctg cagcggcttg
       61 cgcagcacat gcacctccac accgggcggg aacgcgtcgg gcgcgaccgc tgccgtcgtg
      121 tcttccagca ccagtgccgg gccgcggtag cccagcgcgg ccatctcgcc cagcagctgg
      181 ctggccggca gcagcttgga accggcatcg gcgatcacca gtgccggcat cgcctcctgc
      241 tgcatccagc gcagcgcggc cgggccgtcg gaggccagct gcagctgata gccctggctg
      301 gacagcgcat tgccaagcag cgaaagacgc gtcgcctcgc catcgaccac caggatcgac
      361 tgcccgctac ccagcgccac cagttgctcg atcggctcgc tgccgtcgct ggcttcatgc
      421 atcggcaggc gcagttcgaa acaggtgccc tgccccggct ggctgctgac atggatgctg
      481 ccgccggcgc cttcgacgat gcgcttgcag gacatcaggc ccaggccggt gccatcagcc
      541 ttggtggtga agaacgggtt gaacaggtgc gacaacgtgt ccgcatccat gccgatgcct
      601 tcgtcggcca cccggatgtg catccagtcc acgccatcgc gctggccggc atggctggca
      661 atcaggctca ggcggccgcc attgggcatg gcctggatcg cgttcaacgc caggttcaac
      721 atgacctgct gcagctcggt gtagttggcg tcgaccacca ggccctggtc ctgcacctgc
      781 agttccagcc gtacggcgtc gggtacgttg ctgcgcaaca gcagcgccac cgcatcgaac
      841 aggccgtcga tctcgatgcg ttcgcttggc ttgcgcgagc cgcgcacgaa cgacagcatc
      901 gactcggcca tctcatggcc gcgccggccg cactcggcga tgacatcggc caggtggtgc
      961 agctgcggat cttcggtgcg cgccttcagc aggtccggca tgatcagcag cggctgcagg
     1021 atgttgcgca ggtcgtggct gagaccagcg gcaagcagcg acaggctttc cagccgctgg
     1081 gcgcgcatca gctcggtttc cacgcgtgcg cgttcgaccg cactgcgcgc atcgcggatc
     1141 gaacgcgcca ccgccgacgg caggcgcgcc ggctggtgct tgatgatgta gtcgttggcg
     1201 cccttctgca gcgctgctac cgcgttctct tcacccatgg tgccggagac gaagatgaag
     1261 ggcacttccg gcgaggtctc gcgcacgatg cgcaacgcat cgtcaccgga gaagcccggc
     1321 atgctcaggt cggacagcac gatgtccggc tggaacgcgg ccagcgcctg gcgcagttcg
     1381 gcctcgctct cgacgcgctc gaagcgggcg tccagccccg catcgagcat ctgttcggac
     1441 atcagctcgg catcttccgg tgaatcctcc accagcagga tgcgcagcgc ccccagggcg
     1501 ggaccggtca ggggcatggg ctcactcgag ttccggtgcc tggttgatca acgcccagaa
     1561 cttgcccagc gtctgcacgg cgccgaagaa ctggtccaca tccaccggct tgaccacata
     1621 ggcgttcacg cccatgtccc agctgcgggc caggtcgctc tcctcgcgcg aggacgacag
     1681 gatcaccacc ggcaggcgct tgagttcttc gtgctcgcgg atctgccgca gtacttccag
     1741 gccatccatg cgcggcatct tgatgtccag cagcagcacg gccggcaggc cttcctcgcg
     1801 gttggcgaac gcgccgcgac gcagcaggta gtccatcact tccacgccat cctcgacgtg
     1861 cacgatgggg ttggccagac gcgcctcttc cagggcgtcg atcgccatct cggcgtcggc
     1921 cgggctgtct tcggcgagaa gaatggtgcg cagagtcgtc atgcagaagg accttgtttg
     1981 tccgcgtcga tcgcgggagg caggtagaag tggaaggtgg cgccgacgtc cggttcggcc
     2041 tcggcccaga tccggccgcc atggcgggtc agcacgcggc gcacgctggc caggccgatg
     2101 ccggttccag ggtagtcact ggccttgtgc aggcgctgga acacgccgaa cagcttgccg
     2161 gcataggcca tgtcaaagcc tgcaccattg tcgctgaccg tgaactgatg gccgccatcg
     2221 ggctgctgct ggcagtccac gcggatcctt gccggctcac ggttgcctga atacttcacc
     2281 gcgttaccga gcaggttcag ccagacctgg cggatcatgt tctcgtcgcc caccacgatc
     2341 ggcagcggcg caatgctcca ctcgacctgg tgcgcgtggc cgctgttttc ggcctcggcc
     2401 tgcaggttgg aatcgagcat ggcgcgggta tcggccacca gcgactgcat gtccaccgcc
     2461 tgctggcgca tcgccacgcg gcccagccgc gagtagacca gcaggtcgtc gatcagcgcc
     2521 gccatgcgcc gtgccgagct ggagatcacc tccaggtagt gccggctctt gtcatcggcc
     2581 tgctcaccca gatggcgtga cagcttgtcc gagaatccgg cgacatggcg cagcggcgca
     2641 cgcaggtcgt gcgagaccga atagctgaag gcctccagtt cgcggttgac ctcggacacc
     2701 tgcgcgacct tgccttccag ctgccgattc agatcttcca cgcgcagctg cacggcacgc
     2761 tgcaccgtta cgtcgctgac ggtcatcaat accacttcgt catcggtatc cggcagcggc
     2821 atgcgccgtg cgttgagcaa catgtagcgc accatgccgt cggcggcgcg ctgctcgtgc
     2881 tcgaagtccc acagttcgcg gccgcgcagc agcacgtcgg acagacgctg gcgcatcacc
     2941 gggtcctgcc aggcgccgtc accgacggtt tccagcagca ggccgtcggc acgctcgtcc
     3001 tccagtccat acagctcggc aaacgccgga ttgtgcagct gcacgcgcag ctcacgatca
     3061 agcagaacaa tgggctcgcg cacggtctgc agcaccgatg ccgcacgcgc ggccgagcgc
     3121 agcgactgcc gctcggcgtg caggcgacgg ccgatctgcc gatgcagcag ccacagcacc
     3181 aggcccagca gggccagctg cactaccagc gagctccagg acacaaactc ggtctgccgg
     3241 cgctggcgcg ccgcctgttc cgcacgcagt gccagcagtt cctgctcgct ggcctgcaat
     3301 tcctcgacca ggccgcggat gggatagcgc gtgctcagat cctgcaccag cccgcgctga
     3361 tcgctgttgg gttcggacct ggccagctcg cgggccagcg ccatgcggcc ctccagcatc
     3421 gattcgatac gaccgatgcg gatcagctgg tcgggattgt cgcgggtcat ccggcccagc
     3481 tcggccaggc gccccggaat ctcgttggcg cgcgccatgc gctcgcgcag gccgggcgca
     3541 tccacgccct tggacagggt caacgcggcc gattcgacgt cacgcacgtc cgcctgcaac
     3601 tgctgcaggg cattgcctac ggcctgggta tggttgaccc aggccatcgc ctgctcgctg
     3661 tcctgctgca gcttgcgcag ggtcaaccat ggcaccacga tgatcgcgac ggccgccagc
     3721 gccaaggccg gcaaccgcca gcggtcccag atgtcgtcac tgaaaaccag cgccatagtt
     3781 cctcgtcagc acggccgcgg agcacctgcc gggaccagcc cggctgcggc ggaaccggca
     3841 atatagcgca ggcggtcaca actctgggat tcagggcgcg gctggctgaa cgggtagggg
     3901 gcgtcccctt cttggtggcg ccgagcaggg cccggctcca aagaaaccgc tgggcgcccc
     3961 tgctggggcg cccaccaggt tcagcgcttg gcagcggcgc tgaccttgag tgctgcggca
     4021 tcgacgcggg tcacgccctt gatgcccttg gcagtggtga ccgccttgtc cttctcggcc
     4081 tgggtcgcca cggcgccgct gaggctgacc acgccgttca cggtttccac cttgatttca
     4141 gtgcccggaa cgttactgct ggccagcagg tcggccttca ccttggtggt gatccaggta
     4201 tcggtcactg gctcgttgga gtcatggcga tcggcatggg ttgccggatg ggtgctggtc
     4261 ggcgggctct tcgcggccgg gtccttggcg aaggcggccg aggaggacag cgccaggccc
     4321 agggtcaggg cagaagcaat cagcgtgcgg gtggtattgc tcatcgtgtc gtactccttc
     4381 gggatgtgct gccagtctgg acacgccgcc gtggagcagg cgtggcgttg cagtcatgcc
     4441 gctgtgaatc gaagcgtttc caacggcaac ggttcagttt tggacgctga tcgccggtcg
     4501 tttaccctgc cctttccctc tgccggagct gtgcgatgcg ccccgacctg caactggccc
     4561 tgatcggcta cggcctcgcc ggccgggtct tccatgcgcc gctgatccag cacacgcccg
     4621 ggctggtgct gcacagtgtg gtcagttcgc agcgcgacac gctcctgcgc acgttcagca
     4681 acgtgcacgt gcgggccacg ccacagcagg tcttcgacga tccggcggtg gatgcggtgg
     4741 tgatcgccac gcccaacgaa cagcacgcgc cgttggcgat cgccgcgctg gcggcgggca
     4801 agcatgtgct ggtcgacaag ccattcgcgc tcgacgtcac cgaggccgaa gcaatactgg
     4861 ccgcggcgcg cgatgccggg cgcatcgcga ccgtgttcca gaaccggcgc ttcgatgccg
     4921 acttcctcac cctgcaggcg ctgttggcgg agggtgcgct tggtgacgtg gccgagtgcc
     4981 atgcgcattt cgaccgctac cggccgcagg tacgcgagcg ctggcgcgaa caggatggcc
     5041 ctggaagcgg cgtgtggtac gacctgggcc cgcacctgct ggaccagatg ctggtgctgt
     5101 tcggctggcc cgaggccatc gacgccgatc tggcggtgca gcgcgaaggc ggcagcggca
     5161 tcgattactt ccacgcagtg ctgcactacc cacggcatcg cgcgatcgtg catgccggtt
     5221 cgctggtggc ggcgcccaca ccgcgcttca ccgtgcatgg cagcacgggc agctggatca
     5281 agcacggcct ggatgtgcag gaagcgcagc tgcgccgtgg tgttgcaccg ggtgctccgg
     5341 gctggggcat cgatccgcgg catggcgagc tgctgcgctg cgatgccgag gacaacgtgc
     5401 agcgcggcac cgtcgacaac ctgcccggcg attaccggcg gctgtatgcg cagttcgcgg
     5461 cggcgatgca cggtgatggc gaagcgacgg tcagtgcggc gcaggcgctg cagctgatgc
     5521 ggttgctgca ggcggggatg gacagtgcgc gcgacgggcg gcgcatcgcg ttggggtgac
     5581 cggcagggct gcgccctgca cccgccgaat caacgtcaac gtcaacgtca acgtcaaaag
     5641 caagctatcc gtgggatggc ggggtggatc cggttgcggg ggacgccgta aacccatccc
     5701 tgggagcttc gacagttttc cgcgcccgac ggtaggtgtc gaccttggta gacacggatc
     5761 cacgccatgc gtggatcgcg tggtcatgcg ttttctctgt tacgacttct tgatggcgtg
     5821 gccgccgaac tcgttgcgca tcgccgacag caggcggtcg gtgaacgaat tcgattcgcg
     5881 cgagcgcagg cgttccagca gcgacagcgt gattaccggg gccggcacgt ccaaggcaat
     5941 cgcttcggcc acggtccagc ggccttcacc cgaatcctcg acgtacgggg cgatgccgtc
     6001 caacgacgga ttgcgcttga gcgcttcggt gctcaggtcc agcagccacg aacgcaccac
     6061 gctgccatgg cgccacacct ccgccacctg ggccaggtcc agttccatct cctgcttgcg
     6121 ctccatcagc gcgaagcctt cggcgtaggc ctgcatcatt ccgtactcga tgccgttgtg
     6181 gaccatcttg gtgaagtggc cggcgccgga cggacccacg cgggcccagc cgcgatcttc
     6241 ggccggggcc agcgtgcgca gcagcggggc gatctgctcc accaccgggg cgtcgccgcc
     6301 gaccatcagg ctgtagcctt cctgcaggcc ccacacgcca ccgctggtgc cgcagtcgac
     6361 gtagcccaga tcgtcttcgg ccagcgcctt ggcgcggcgg atcgagtcct ggtagttgga
     6421 gttgccaccg tcgatgacga tgtcaccctc ggccaggtgc ggggtcagtt ggcccagggt
     6481 ctggtcgacg gtctcgccgg ccggcaccat cagccacacc acgcgcggca ctggcagcgc
     6541 agcgacggca gcggccagcg aatcaaccac ctccaggccg gcctcagccg cacgctgacg
     6601 cgcgccttcg cccgggtcgt agccgaccac gcggtggccg ccgcgatgca ggcgctgggc
     6661 catgttggca cccatgcggc cgaggccgat cattgcaata tccattgttt caccttcagt
     6721 tggggtctag ggtcaggctg cctggcctgc cggtggccgc gcagtggcgc agctgcgcct
     6781 cgcgccaacg ccggtagagc gtggtatgca gattgtgcac cgccaggtcg atcgaaaacg
     6841 gtgttcgtgg gttgcgatca agcaggcggg cgacgtggta gccgatggga cgtataccgc
     6901 gcgggtgcac atagatcacg aactgctggt agaacggatc gtccagcagc tggtccatgc
     6961 gtgccagcgt gtcgtggtag cgcggttcca gccgtgcgcg caggtccggg tcgcgctcga
     7021 acagcaggcg ctcgaagtag cgctggccga tgcgcgggat gtcctgcgcg agcttccaca
     7081 actcgacatt gcgctggtcg taccaggcca gcccgccgtg cagggccagc gcctgcgcag
     7141 cgccctcgcc cacctcgacc accacgaagt tctcggcctg gttgctcaga tcgtccagcg
     7201 tgcccttgtc gtacacatgt tcgatgaaac ccggcacacc gacgaacgcc tgccgcccca
     7261 tcatcgatgt gcgcacggcc ttgccatcgg cgaagaagtc acctgcgctt gcacccagca
     7321 ggatgctgtc ggtgtcatgc agcgccagga acgtgccaat cgacagttcc gcgggtttga
     7381 actcggtatc gaacgcagca tcgccataca gttcgcgttg cgtggccagc tgcgcgacct
     7441 gacggccgac gccacattcg gcacgcacgc tgccgctgta gaacgtctgc aatgcacggc
     7501 tgttgccggc gctgggtacg taaccgcggc cgaaactgcg cgtgcgctgc cagccctgcg
     7561 ccccggcacc cttcacgccg aaaccgatcc agcccagctg cggaccggaa aagcggaacg
     7621 tcggattgtc ctgcaatgcg gtcgccgcac gctgcgtggc ggcccccagc tcgaacgcat
     7681 aggcgcagac cgtggccggg ttgtccagga gctcccgcag ttgtgcctgt cgggccgcag
     7741 cgggcattgc ggccggccac tgcacgcgta gatcgcccgc cgcctgcgcc tcggccaacg
     7801 tggcgcgcgt gcacacggca ccgccgtgca cctgcggcgt ggtcaccgcc gcctcttcga
     7861 agcgccagcc cagccgctgc agcaggccct gcgtgcagtc cacgggcgtg gccgccgtcc
     7921 ccagcacggg caccagcagc agggccatgc cgatcaacct gccgcgcacg ctcacccctg
     7981 gtccctgctg gccggtgcag gttccggagt cgcaggtacg ggcgaagcag gcggcgcggg
     8041 cgtggctgcg tccgcaggca ggtactgctg caggcgctgg aagaaacgac gatagaactc
     8101 cgcatcggtg actgtgctgc tggccacttt caccagcgaa tcatcgttgc tgccgaacgg
     8161 cagcgacacc gagcccagtg cacctacgcc cacgctggcc gacgtcgggc tcttcttcag
     8221 cgcatagcgg tcctgcaccg cgctgacgaa caccagcgtc tggctgccac gcggcgcgca
     8281 ggagatgcgc agcaccagct gctcgtgatc gtcgtcgcgg ggctggaaat tcttgttgcc
     8341 ctccacctgt gcctcgtccg agcgggcaat ggcatagccc tggctgagca gggtccgccg
     8401 cgccgcttcg caggcatcac cgggacggcc atcgacggtg cgcgagaagg tgtcgccgga
     8461 atcaaaggat tcacgcaaca gggtgctgtc ggcggcgcgg ccaccacagg ccgacaggat
     8521 cagggcgctg gcaagggcga cggcagcgtt ggaaagacgg gaggcccgca tgggtactcc
     8581 tgcgaggacg gtactgccaa gggtagtccc gcggccgtgt gtggcaggtc gaaagtgcgc
     8641 ctacccgccc ccgccgttgc ggcctgttca tgcacaaaaa aggggacgga ggggattaag
     8701 tcgtttgtgg cacaaacgac ttaatcccct ccgtcccctt ttcaagcggg atggcggatc
     8761 agtcggccca gcggccggcg ccggtggact gcggcagcac ctgcgccgac agcgggcggt
     8821 cgttggccag caggttcacc gcatcggcca ggatcgaggc cgactcgcgc agcagcgggt
     8881 ccggacgctt ctctgcggcc ttctcgcgtg cggcatcctt gacgatgtcg cgctcgttgc
     8941 cggtcaggcc gtcgtcgctg ctgtcatcgg ccagcgggtc cagggccagg cccagttcct
     9001 tgcgctgcac ttggcgttcc ttgcgctggg catcctggcg ctcgcgttcg gcgcggcggg
     9061 ttgcctcgtt caacgagatg tacttcttcg ccgcttcagt gcggaactgc tgcacgtcct
     9121 cgttccacca ctggaattcc ttgtcggtgg cgatgcgtgc gtcgtgacgc gtttccagct
     9181 tcggcagcag cggtgcgaag ttgccgtact gggtgtgcgg cacggcagcg atgcgggtcc
     9241 acggcaatgc gttgtcgtag gtgctttcgc cgaactctgt ggcatcgacg ctggccggga
     9301 aggccaggtc cggcaccacg cccttgtgct gtgtgctgct gccgctgatg cggaagaact
     9361 gggcgatggt cagcttgacc tggccgaagc gctgggtttc gccgctcggc cagcgatcga
     9421 ggtcgacgat gttctgcacg gtgcccttgc cgaagctggt ttcaccgatc accaggccac
     9481 gaccgtagtc ctggatggcg ccggcgaaga tttccgaggc cgaggccgaa ccgcggttga
     9541 tcagcaccgc cagcgggccg tcccaggcca cgccctggtt gcggtcgctg ttgacggtga
     9601 cgcggccacc ggactcgcgc acctgcacca ccgggccctg ctcgatgaac aggccggtca
     9661 gttcgatcgc ttcatccagc gaaccaccgc cgttgttgcg caggtccagc accacgccgt
     9721 ccagtttgtc gttcttgaaa ccggccagca gcttggccac gtcgcgggtg gccgaggcgt
     9781 agtcggcggc attgcggcga cggccttcga agtcctggta gaaggtcggc agcttgatca
     9841 cgccgacctt ccgtgccggt tcaccgttgg cggccggaat ggtcatggtc tcgcccttgg
     9901 cggcctgttc ggccaggcgc accttctgcc gggtcagcac cagggtgtgg tgcttgccgt
     9961 cggcaccttc cgcggccgga atgaattcca gcttgacctg ggtgtccttg gcgccgcgga
    10021 tcttggccac gacatcatcg atgcgccagc cgatcacgtc ctcgaccagg ccggatttgc
    10081 cctggccgac gccgacgatg cggtcacccg gcttcagcgt gccgtcgacc gctgccgggc
    10141 caccggcgat gatctcgcgg atcaccacca cgtcgtcctg gcgctgcagc tgcgcgccga
    10201 tgccttccag cgacagcgac atcgcctggt tgaagttctc ggcggtgcgc ggagtgaagt
    10261 aatcagtgtg cggatcaacc gcgctggtgt acgagttcat gaagaactgg aagacgtctt
    10321 cgcccttcag ttcattgacc gacttctcca gcgtggcata gcgcttgtcc agcgtcttgc
    10381 ggatgtcgtc cggcttcttg ccggccagct tcaggcgcag ccaatcattc ttgaccgact
    10441 tgcgccacag ttcatccagt tcggcgctgc tggccgccca cggcaccttc ttgcggtcat
    10501 attcgaaacg ctcgtcggtg gtaaagtccg gctcctgctt gagcagcttg cgcgcgtacg
    10561 ccacgcgctc gcccacgcgc tgcttgtaga cggcgaacac ctggaacgcc ggctccagct
    10621 cgccgccacg gatggccgaa gagatattgg cttcgaacgg cgcgaagcgc gccacgtcag
    10681 cctgggtgaa gtactgcttg ccgccgtcca gcgtctccag gtagcgcttg aacacgtcct
    10741 tggaggtggc ctcgtccagc gcgcgcgggc ggtaggcgta gcggctgtcg gacaacaggc
    10801 cgtacaccag cttggaggtg gtcacctgat cggcggtggc cgccgcgggc aatgcaggcg
    10861 agtcggcctt ggccgccagc gccagcggcg cgaccagcgc cagggccatc aggaatgcgg
    10921 gggctttgaa tttcattgac gtgctcgaag gcgccttgcc aagggggaga ctgcagggtg
    10981 ttcagacacc acgacagtgc cgaaagttgc cgggtttgtc acccggccgc gctcggtgga
    11041 aaaccagcct agcggggccg gtgtagcaaa ttgtg
//
LOCUS       DAOKIP010000133        11054 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.133,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000133 DAOKIP010000000
VERSION     DAOKIP010000133.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 11054)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11054)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11054
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.133"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(89..3175)
                     /locus_tag="QEL58_002795"
     CDS             complement(89..3175)
                     /locus_tag="QEL58_002795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005416222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HDS1677245.1"
                     /translation="MSVAEFSIRRPVTTIMCFVSLVVIGLIASFRLPLEALPDISAPF
                     LFVQIPYTGSTPEEVERTIIRPVEESLATMTGIKRMRSSATSEAALIYIEFSDWDRDI
                     AIAASDARERIDAIRSDLPDDLQRYNVFKWSSSDQPVLKVRLASTTDLTTAYDMLDRE
                     FKRRIERIPGVARVDITGAPPNEVEIAIDPNRLNAHGLSINELSERLRTLNFSISAGQ
                     IDDNGQRVRVQPVGEITDLQEMRDLVINAKGLRLGDIADVRLKPARMNYGRRLDGNPA
                     VGLDIFKERSANLVEVSRAALAEVESIRAEASMRDVQIKVIDNQGKAVTSSLLELAEA
                     GAVGLILSITVLFFFLRHWPSTLMVTLAIPICFTITLGFMYFVGVTLNILTMMGLLLA
                     VGMLVDNAVVVVESIYQERERMPGQPRLASIIGTRNVAIALSAGTLCHCIVFVPNLFG
                     ETNNISIFMSQIAITISVSLLASWLVAVSLIPMLSARMATPKLVHSQTGMIARLQRRY
                     ATLLDWSLHHRGWSLLGIVLVVLVSLVPMKLTKIDMFGGDGGKDIFIGYMWKGAYTYR
                     QMSDEVARVENWIDQNRERLHVKQVYSWYSEQEGSSTVVTLDEKYAKDIKALQEELRK
                     GLPKSARTDYFVGNQGGDGGGGGNQGVQVQLVGDSSSMLQEIGQEVVPLLAQRAELRD
                     VRIDNGEKGGELKVRVDRERAAAFGFNAEQVASFVGLALRGAPMREFRRGDNEVPVWV
                     RFAGAEQSSPEDLAGFSVRTGDGRSVPLLSLATVDVGSSATQIGRTNRQTTLTIKANL
                     AEKVTAPDGRKAMEAVLKPMNFPAGYGFTFDGGDYGNDDEAMQQMVFNLLIALVMIYV
                     VMAAVFESLLFPAAIMSGVLFSIFGVFWLFWITGTSFGIMSFIGILVLMGVVVNNGIV
                     MIEHINNLRRGGMGRTQALVEGSRERLRPIMMTMGTAILAMVPISLTSTQMFGNGPEY
                     APMARAIAGGLAFSTVVSLLFLPTIYAVLDDLRSAVTRLIRRARGLEMVEPGAARL"
     gene            complement(3172..6693)
                     /locus_tag="QEL58_002796"
     CDS             complement(3172..6693)
                     /locus_tag="QEL58_002796"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HDS1677246.1"
                     /translation="MTAPGHDHGASPASDGAAAGLRGGLVEFATRRRVTIAMCTVTLL
                     LFGLIALGNLKVNLLPDLSYPTLTVRTEYTGSAPTEIETLITQPVEEAVGVVKNLRKL
                     KSVSRTGQSDVVLEFAWGTNMDQASLEVRDKMEALNLPLEAKAPVLLRFNPSTEPIMR
                     LVLSSKTAPASDADAIRELTGLRRYADEDLKKKLEPVSGVAAVKVGGGLEDEIQVDID
                     QQKLAQLNLPIDTVIKRLKDENINISGGRLEEGSQRFLVRTVNQFADLEEIRNLLVTT
                     QGSNGSAADSALQQMFNIAASTGSAAAIAAASAAQSASSGGGSSVVANGVPVRLKDVA
                     TVRQGYKEREAVIRLGGKESVELAIYKEGDANTVSTAEALRKRLEQIKGTFPADVEMT
                     TIEDQSRFIEHAIADVKKDAVIGGLLAILIIFLFLRDGWSTFVISLSLPVSIIATFFF
                     MGQLGLSLNVMSLGGLALATGLVVDDSIVVLESIAKARERGLGILQAAIAGTREVSMA
                     VVASTLTTIAVFLPLVFVDGIAGQLFRDQALTVAIAIAISLLVSMTLIPMLSSLKGRP
                     PLAFPEEAPNEPWQPQNRWQKPVALGRRGVVATARWGFFALAWLIVRLWRGVVAVVGP
                     VMRKASDLAMKPYAGAERGYLRLLPSALAHPGKVLGVATLIFVATMALVPMLGADLIP
                     QLAQDRFEMTVKLPAGTPLKQTDALVRELQLAHGKGEGVASLYGVSGSGTRLDASPTE
                     SGENIGKLTVVMEGGGNARTEAAITERLRGTMGQHPGAQVDFARPALFSFSTPLEIEL
                     RGQDMATLEVAGQRLAAMLRGNAHYADVKSTVEEGFPEIQIRFDQERAGALGLTTRQI
                     ADVVVKKVRGDVATRYSFRDRKIDVLVRAQEGDRASVESIRRLIVNPGSTRPVTLDAV
                     ADVVATTGPSEIHRADQTRVAVVSANLRDIDLGAAMREVQQMVAEQPLGAGVGLHIGG
                     QGEELAQAAKSLIFAFGLAIFLVYLVMASQFESLLHPFVILFTIPLALVGAILALMLT
                     GKPISVVVFIGLILLVGLVTKNAIILIDKVNQLREAGVAKHEALVEGARSRLRPIIMT
                     TLCTLFGFLPLAVAMGEGAEVRAPMAITVIGGLLVSTLLTLLVIPVVYDLMDRRGDAY
                     YRERGRKHAGEIEPGAAGSAAGAEEPA"
     gene            complement(6690..7841)
                     /locus_tag="QEL58_002797"
     CDS             complement(6690..7841)
                     /locus_tag="QEL58_002797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MexH family multidrug efflux RND transporter
                     periplasmic adaptor subunit"
                     /protein_id="HDS1677247.1"
                     /translation="MSHPTFLSGRRSGICAAALLISTSLLLGGCAAGPNSEAKAAETK
                     EEKKVDAVPVEVAVASHRAVAASYTGTAALEPRAESQVVAKTSGVALAVLVEEGQRVT
                     AGQPLVRLDPDRARLAVAQSEAQMRKLENNYQRAQKLVGQQMVSAADVDQLRFDLENV
                     RAQYRLATLELSYTTVVAPISGVIASRSIKTGNFVQINTPIFRIVDNSRLEATLNVPE
                     RELATLRAGQPVTLVADALPGQSFTGTVDRIAPVVDSGSGTFRVVSAFDGAAHALQPG
                     MFGRIRIDYDQRADALVVPRLSLLDDGEPAVFRVREGKVARVPVKLGYAEGPWVEIRD
                     GLAAGDQVVTAGKVALRDGTAVQVIADPKAKAKTVAASATPADKAGSKQ"
     gene            8047..8436
                     /locus_tag="QEL58_002798"
     CDS             8047..8436
                     /locus_tag="QEL58_002798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014646842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HDS1677248.1"
                     /translation="MRPQPLAACLALAVLLPLGAAAQPAPAPATPAPAPAPAAATAPA
                     APTGNFDNGRVLAYTCQGCHGITGYKNAYPSYRVPKIGGQTQQYLAQALTEYRQGKRR
                     HPTMQAQSMSFSEQEIADLSVYLSTVK"
     gene            8446..8907
                     /locus_tag="QEL58_002799"
     CDS             8446..8907
                     /locus_tag="QEL58_002799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006430887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HDS1677249.1"
                     /translation="MSKAAHPMRHAIALSVALLLAACSQSQVENSEKSAADPGHASGE
                     HGSSSSAGLPAGREAAGEARAKVKGKATNQSCIDCHGADGNAPIDATYPKLGGQYGDY
                     LAHALQAYRAGDRQHALMTPQAKDLSDQDIADLAAYFGSRPSQLRDLHGVK"
     gene            complement(9082..10962)
                     /locus_tag="QEL58_002800"
     CDS             complement(9082..10962)
                     /locus_tag="QEL58_002800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005413032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HDS1677250.1"
                     /translation="MPLITLQNVDFSVGGPLLLEKAELSIEPGERIALIGRNGAGKST
                     LLKLLSGDHKPDDGEVRVQQGVRVTRLEQEVPHGAAGSVFDVVADGLGELGQWLAEFH
                     HLSHAEVFDGEALGNVQAKIDAANGWGLDQRVSETLTKLDLDGDAEFGRLSGGMKRRV
                     LLARALVSSPDVLLLDEPTNHLDIEAIDWLEAFLKGWSGSVVFVTHDRRFLRALATRI
                     VEIDRGQVTSWPGDWANYERRREERLNAQAQENARFDKLLAQEEVWIRQGIKARRTRD
                     EGRVRRLKAMRTERSQRRDLSGNVKMEAAQGVSSGKKVIDVKDISFAFGERTMVRDFS
                     TTILRGDRIGLIGPNGSGKTTLLKLLLGELQPAKGEVNPGTNLQIAYFDQYRAVLRED
                     WSAIENVAEGRDFLEFNGKRKHVHAYLQDFMFTPERARAPITRLSGGERNRLLLAKLF
                     AQPSNLLVMDEPTNDLDVETLELLEELLGEYTGTLLLVSHDRDFIDNVVTSTLVMEGD
                     GVIGEYVGGYSDWQRYAASIAAPAAAPAAKPAAAAPAATAAAPAAPKRKLAYKEAREL
                     EQLPKTIEKLEGDVEGLTSAMNDPSFYTRSSAEVTAHTQQLAKVQAELDAAYARWEEL
                     EG"
BASE COUNT         1809 a         3813 c         3574 g         1858 t
ORIGIN      
        1 agaaggcaaa cggacgcggc gaacgaaaaa agggggaggc cgccccacta cgaccggcct
       61 cccccacacc acaacacgtt gtcgcgcatt acagccgggc agcgcccggc tctaccattt
      121 ccagcccgcg cgcacgacgg atcagccgcg tcacggcgct gcgcaggtcg tccagcaccg
      181 cgtagatggt cggcaggaac agcaggctga ccacggtcga gaacgccagg cctccggcga
      241 tcgcgcgcgc catcggcgcg tactccgggc cattgccgaa catctgcgta ctggtcagcg
      301 agatcggcac catcgccagg atcgccgtgc ccatggtcat catgatcggg cgcaggcgct
      361 cgcgtgagcc ttccaccagc gcctgggtgc ggcccatgcc gccgcgccgc aggttgttga
      421 tgtgctcgat catcacgatg ccgttgttca ccaccacgcc catcagcacc aggatgccga
      481 tgaaggacat gattccgaac gaggtgccgg tgatccagaa cagccagaac acgccgaaga
      541 tcgagaacag cacgccgctc atgatcgccg ccgggaacag cagcgattcg aacaccgccg
      601 ccatcaccac gtagatcatc accagcgcga tgagcaggtt gaacaccatc tgctgcatcg
      661 cctcgtcgtc gttgccgtag tcgccgccgt cgaaggtgaa gccgtagccg gccgggaagt
      721 tcatcggctt gagcaccgct tccatcgcct tgcggccatc cggcgcggtg accttctcgg
      781 ccaggttggc cttgatggtc agcgtggtct ggcggttggt gcggccgatc tgggtggcgg
      841 acgaaccgac atcgacggtg gccaggctca gcagcggcac gctgcggcca tcaccggtac
      901 gcacgctgaa gccggccagg tcttccgggc tgctctgctc ggcaccggcg aagcgcaccc
      961 acaccggcac ctcgttgtcg ccgcggcgga actcgcgcat cggtgcgcca cgcagcgcca
     1021 ggccgacgaa gctggccacc tgctcggcat tgaagccgaa tgccgcggca cgctcgcgat
     1081 cgacgcgaac cttcagttca ccgcccttct cgccgttgtc gatgcgcacg tcgcgcagct
     1141 cggcgcgctg ggccagcagc ggcaccactt cctggccgat ctcctgcagc atcgaacttg
     1201 agtcgccgac cagctgcacc tgcacgccct ggttgccacc gccgccacca tcgccgccct
     1261 ggttgccgac gaagtagtcg gtgcgggcgg acttgggcag gcccttgcgc agttcttcct
     1321 gcagcgcctt gatgtccttg gcgtacttct cgtccagggt gaccacggtc gagctgcctt
     1381 cctgctcgct gtaccaggag tagacctgct tcacatgcag gcgctcgcgg ttctggtcga
     1441 tccagttctc cacccgtgcc acttcatcgg acatctgccg ataggtgtag gcgcccttcc
     1501 acatgtagcc gatgaagatg tccttgccgc catcaccgcc gaacatgtcg atcttggtca
     1561 gcttcatcgg caccaggctg accagcacca ccagcacgat gccgagcagg ctccagccgc
     1621 gatggtgcag cgaccagtcc agcagcgtgg catagcggcg ctgcagccgg gcgatcatgc
     1681 cggtctgcga gtgcaccagc ttgggcgtgg ccatgcgcgc ggacagcatc gggatcaggc
     1741 tgaccgcgac cagccacgaa gccagcagcg agaccgagat ggtgatcgcg atctgcgaca
     1801 tgaagatgct gatgttgttg gtctcgccga acaggttcgg cacgaacacg atgcagtggc
     1861 acaacgtgcc cgcgctgagc gcgatggcca cgttgcgggt gccgatgatc gaagccagcc
     1921 gcggctgccc gggcatgcgc tcgcgttcct ggtagatgct ctccaccacc accacggcgt
     1981 tgtcgaccag catgcccacc gccagcagca ggcccatcat ggtcaggatg ttcagcgtca
     2041 ccccgacgaa gtacatgaag cccagggtga tggtgaagca gatcgggatc gccagcgtca
     2101 ccatcagggt cgaaggccaa tggcgcagga agaagaacag caccgtgatc gacaggatca
     2161 ggccgacggc gccggcctcg gccagctcca gcagcgatga cgtcaccgcc ttgccctggt
     2221 tgtcgatcac cttgatctgc acgtcgcgca tcgacgcctc ggcgcggatc gattcgacct
     2281 cggccagcgc ggcacgcgag acctccacca ggttggcgct gcgctccttg aagatgtcca
     2341 ggccgaccgc cgggttgccg tccaggcggc gcccgtagtt catgcgcgcc ggcttcagcc
     2401 gaacatcggc aatgtcgccc aggcgcagac ccttggcgtt gatcaccagg tcacgcatct
     2461 cctgcagatc ggtgatctcg cccaccggct gcacgcgcac gcgttggccg ttgtcgtcga
     2521 tctgcccggc cgagatcgag aagttcagcg tgcgcaggcg ctcgctcagc tcgttgatgc
     2581 tcagcccgtg cgcgttgagc cggttcggat cgatggcgat ctcaacctcg ttcggcggcg
     2641 cgccggtgat atcgacgcgg gccacgcccg gaatacgctc gatgcgccgc ttgaactcgc
     2701 ggtcgagcat gtcataggcg gtggtcaggt cggtggtact ggccaggcgc accttcagga
     2761 ccggctggtc gctgctggac cacttgaaca cgttgtagcg ctgcaggtcg tcggggaggt
     2821 cgctgcggat cgcatcgatg cgctcgcggg catcggaggc ggcgatggcg atatcacggt
     2881 cccagtcgct gaactcgatg tagatcagcg ccgcttcgga ggtcgccgac gagcgcatgc
     2941 gcttgatccc ggtcatcgtc gccagagact cctcgaccgg gcggatgatg gtccgctcca
     3001 cttcctccgg ggtcgaaccg gtgtacggga tctgcacgaa caggaacggc gcggagatgt
     3061 ccggcagcgc ttccagcggc aaccggaacg aagcgatcag gccgatcacc accagcgaca
     3121 cgaagcacat gatggtggtg accggacggc ggatcgagaa ctcggcaaca ctcatgccgg
     3181 ctcctccgca cctgccgcgc tgccggcggc accgggctcg atctcacctg catgcttgcg
     3241 gccgcgctcg cggtagtagg catcgccgcg acggtccatc aggtcataca ccaccgggat
     3301 caccagcagg gtcagcaggg tcgataccag caggccgccg atcacggtga tcgccatcgg
     3361 cgcgcgtact tcggcaccct cgcccatcgc caccgccagc ggcaggaagc cgaacagcgt
     3421 gcacagggtg gtcatgatga tcggccgcag gcgcgagcgc gccccttcca ccagcgcctc
     3481 gtgcttggcc acgccggcct cgcgcagctg gttgaccttg tcgatcagga tgatcgcgtt
     3541 cttggtgacc aggccgacca gcaggatcag gccgatgaac accaccaccg aaatgggctt
     3601 gccggtcagc atcagcgcca ggattgcacc gaccagcgcc agcgggatgg tgaacaggat
     3661 cacgaacgga tgcagcagcg attcgaactg cgaagccatc accaggtaga ccaggaagat
     3721 cgccaggccg aaggcgaaga tcagcgactt cgccgcctgt gccagttcct cgccctggcc
     3781 gccgatatgc aggccgacgc ccgcacccag cggctgctcg gccaccatct gctgcacttc
     3841 gcgcatggcc gcgccgagat cgatgtcgcg cagattggcc gacaccactg ccacgcgtgt
     3901 ctgatcggca cgatggatct cgctcggacc ggtggtcgcg accacgtcgg ccaccgcgtc
     3961 cagggtgacc gggcgcgtgc tgcccgggtt gacgatcagc cggcggatgc tctccacgct
     4021 ggcgcggtcg ccttcctgcg cccgcaccag cacgtcgatc ttgcggtcgc ggaagctgta
     4081 acgggtggcg acgtcgccgc gcaccttctt caccaccaca tcggcgatct ggcgggtggt
     4141 caggccgagt gcaccggcac gttcctggtc gaagcggatc tggatttccg ggaaaccctc
     4201 ttccaccgtc gacttcacgt cggcgtagtg cgcattgccg cgcagcatcg ccgccaggcg
     4261 ctgaccggcc acttccaggg tcgccatgtc ctgcccgcgc agttcgattt ccagcggcgt
     4321 ggagaagctg aacaacgccg gccgtgcgaa atcgacctgg gcgcccggat gctggcccat
     4381 ggtgccgcgc aggcgttcgg tgatggccgc ttcggtacgt gcgttgccgc cgccttccat
     4441 caccacggtc agcttgccga tgttctcgcc gctttcggtc gggctcgcat ccaggcgggt
     4501 accgctgccg ctgacgccgt acagcgatgc cacgccctcg cccttgccgt gtgccagctg
     4561 cagttcgcgc accagtgcat cggtctgctt cagcggcgtg ccggccggca gcttcaccgt
     4621 catttcgaaa cggtcctgcg ccagctgcgg aatcaggtcg gcaccgagca tcggcaccag
     4681 cgccatggtc gccacgaaga tgagggtcgc cacgcccagc accttgcccg ggtgggccaa
     4741 cgcgctcggc agcaggcgca gatagccgcg ctcggcaccc gcgtagggct tcatcgccag
     4801 atcgctggcc ttgcgcatca ccgggccgac caccgccacc acgccgcgcc acagccgcac
     4861 gatcagccag gccagcgcga agaagcccca gcgcgcggtc gcgacgacgc cacggcggcc
     4921 cagcgcgacc ggcttctgcc agcggttctg cggctgccac ggttcattcg gtgcctcttc
     4981 cgggaacgcc agcggtggcc gtcccttcag cgagctcaac atcgggatca gggtcatcga
     5041 caccagcagc gagatcgcaa tggcgatcgc caccgtcaac gcctggtcgc ggaacagctg
     5101 gccggcgatg ccgtcgacga acaccagcgg caggaacacc gcgatggtgg tcagggtcga
     5161 ggcgaccacg gccatgctca cttcgcgggt accggcgatg gcggcctgca ggatgcccag
     5221 gccgcgctcg cgcgccttgg caatgctttc cagcaccacg atcgagtcat ccaccaccag
     5281 gccggtggcc agcgccaggc cgcccagcga catcacgttc aagctcagcc ccagctggcc
     5341 catgaagaag aacgtggcga tgatcgagac cggcagcgac aggctgatca cgaaggtgct
     5401 ccagccatca cgcaggaaca ggaagatgat caggatcgcc agcaggccac cgatcaccgc
     5461 gtccttcttg acgtcggcga tggcgtgctc gatgaagcgc gactggtcct cgatggtggt
     5521 catctcgacg tcggccggga acgtgccctt gatctgctcc aggcgcttgc gcaacgcctc
     5581 ggcggtggac acggtgttgg cgtcgccttc cttgtagatc gccagctcga ccgattcctt
     5641 gccgcccagg cggatcaccg cttcgcgctc cttgtagccc tggcgcacgg tggccacgtc
     5701 cttcaggcgc accggcaccc cgttggcgac cacgctggag ccgccgccgg acgatgcgct
     5761 ctgcgccgcc gaggccgccg cgatggccgc cgccgagccg gtcgaggcgg cgatgttgaa
     5821 catctgctgc agcgccgaat ccgccgcgct gccattgctt ccctgggtgg tgaccagcag
     5881 gttgcggatc tcttccagat cggcgaactg gttgacggtg cgcaccagga aacgctgcga
     5941 accttcttcc aggcggccgc cggagatgtt gatgttctcg tccttcaggc gcttgatgac
     6001 ggtgtcgatc ggcaggttca gctgggccag cttctgctgg tcgatgtcga cctggatctc
     6061 gtcttccagg ccaccgccga ccttgaccgc ggccacgccg gagaccggct ccagcttctt
     6121 cttcaggtct tcatcggcat aacggcgcag gccggtcagc tcgcggatcg catcggcatc
     6181 gctggccggc gcggtcttgc tcgacagcac caggcgcatg atcggctcgg tggacgggtt
     6241 gaagcgcagc agcaccggcg ccttcgcctc cagcggcagg ttcagcgctt ccatcttgtc
     6301 gcgcacctcc aggctggcct ggtccatgtt ggtcccccag gcgaactcca gcaccacgtc
     6361 gctctggccg gtgcgcgaga ccgacttcag cttgcgcagg ttcttgacca cgcccaccgc
     6421 ttcttcgacc ggctgggtga tcagggtttc gatttcggtg ggcgccgaac cggtgtactc
     6481 ggtacgcacg gtcagcgtcg ggtagctcag gtcgggcagc aggttgacct tgaggttgcc
     6541 cagcgcgatc aggccgaaca gcagcagggt gaccgtgcac atggcgatgg tcacgcggcg
     6601 gcgggtggcg aattccacca ggccgccgcg caggccggcg gcggcgccgt cgctcgccgg
     6661 cgaggcaccg tggtcgtggc ccggggcggt cattgcttgc tcccggcctt gtctgccggc
     6721 gtggcggacg ctgcgaccgt cttcgccttg gccttcggat cggcgatcac ctgcaccgcg
     6781 gtgccgtcgc gcagggcgac cttgccggcg gtgaccacct gatcaccggc cgccaggcca
     6841 tcacggatct ccacccacgg gccctcggcg taacccagct tgaccggaac ccgtgcgacc
     6901 ttgccttcgc gcacccggaa caccgccggc tcaccgtcgt cgagcaacga aaggcgcggc
     6961 accacgagcg catcggcacg ttggtcgtaa tcgatgcgga tgcggccgaa catgccgggc
     7021 tgcagcgcgt gcgcggcacc gtcgaaggcg ctgaccacgc gaaacgtgcc gctgcccgaa
     7081 tcgaccaccg gtgcgatgcg atcgacggtg ccggtgaaac tctggcccgg cagcgcatcg
     7141 gcaaccagcg tcaccggctg gccggcacgc agggtggcca gctcgcgctc ggggacgttg
     7201 agcgtggctt ccagccgcga gttgtcgact atgcggaaga tcggcgtgtt gatctgcacg
     7261 aagttgccgg tcttgatcga gcgcgatgcg atgacgccgg agatcggtgc caccaccgtg
     7321 gtgtaggaca gttccagcgt ggccaggcgg tactgcgcgc ggacgttttc caggtcaaag
     7381 cgcagctggt cgacgtcggc ggcgctgacc atctgctggc caaccagctt ctgtgcgcgc
     7441 tggtagttgt tttccagctt gcgcatctgc gcttcactct gggcaacggc caggcgtgcg
     7501 cggtccgggt ccagccgcac cagcggctgg ccggcggtca cccgctgccc ttcctcgacc
     7561 agcaccgcca acgccacgcc ggaggtcttg gccaccacct gcgattcggc gcgcggttcc
     7621 agtgcggcgg tgccggtgta gctggccgcg accgcgcggt ggctcgccac cgccacttcg
     7681 accgggaccg catcgacctt cttctcctcc ttggtctcgg cggccttggc ttcggaattg
     7741 ggccctgcgg cgcaaccgcc cagcagcagg gaggtggaga tcagcagtgc ggcagcgcag
     7801 attccgctgc gacggccgga caggaaggtt gggtgcgaca tcgtcgggtc cctggaggat
     7861 gcgtggacag gtgtggtagc aaagtaatgc accacttcac ggccacacca tatcccaaag
     7921 gtcatggtgt cttcacgccg ctggtcggcc cacccccatt tcagctagat gaaacctggg
     7981 gctatactcg gggcgttccg taccccacgc cggaacgacc agacccgaat ccccggaaac
     8041 gacaccatgc gcccgcagcc gctcgccgct tgtctcgctc tggccgtcct cctgcccctt
     8101 ggggccgccg cacagcccgc tcctgctcct gccacacctg ccccggcccc ggctcccgcc
     8161 gctgccacgg cacctgccgc ccctaccggc aacttcgaca atggccgcgt cctggcctac
     8221 acctgccagg ggtgccacgg catcaccggc tacaagaacg cctaccccag ttaccgggtg
     8281 ccgaagatcg gcggccagac ccagcagtac ctggcccagg ccctgaccga gtaccgccag
     8341 ggcaagcgcc ggcatccgac gatgcaggcg cagtcgatga gcttcagcga acaggagatc
     8401 gccgatctct ctgtttacct gtccaccgtc aagtaaggcc cgcccatgtc gaaagccgcg
     8461 catccgatgc gtcatgccat cgccctgtcc gttgccctgc tgctggccgc ctgttcgcag
     8521 tcgcaggtgg aaaacagcga aaaatccgcc gccgacccgg gccatgccag cggcgaacac
     8581 ggttcgtctt catcggccgg cctgcctgca ggccgcgagg ccgcgggcga agcccgtgcc
     8641 aaggtgaagg gcaaggccac caaccagagc tgcatcgact gccatggggc ggacggcaat
     8701 gcgccgatcg atgcgaccta tccgaagctg ggtggccagt acggcgacta cctggcgcat
     8761 gccctgcagg cctaccgcgc cggtgaccgc cagcatgcgc tgatgacccc gcaggccaag
     8821 gacctgagtg atcaggatat cgccgatctg gcggcgtatt tcggcagccg gccaagccag
     8881 ctgcgggatc tgcacggggt caaatgaccg ctggcccccc ggtgggtgcg gaccttggtc
     8941 cgcactgatg ccgccatcca cgcatggcgt ggatctacca ggcatcggcg tcggtaggtg
     9001 cggaccgttg gtccgcactg aacgcgctac ccacgcatgg cgtggatcta ttgattgtcc
     9061 accggcagcg ccggccggcg ctcagccttc cagctcttcc cagcgtgcgt acgcggcatc
     9121 cagctcggcc tggaccttgg ccagctgctg ggtgtgcgcg gtcacttcgg cactgctgcg
     9181 ggtgtagaac gacgggtcgt tcatcgccga ggtcaaccct tcgacgtcgc cttccagctt
     9241 ctcgatggtc ttcggcagct gttccagctc gcgcgcttcc ttgtaggcca gcttgcgctt
     9301 gggcgctgcg ggagcagcag ccgtggcggc cggtgccgct gccgccggct tggctgccgg
     9361 ggccgcggca ggtgcagcga tgctggcggc atagcgctgc cagtcgctgt agccaccgac
     9421 gtactcaccg atcacgccgt cgccttccat caccagcgtg gaggtcacca cgttgtcgat
     9481 gaaatcacgg tcgtggctga ccagcagcag ggtgccggtg tactcgccca gcagctcttc
     9541 cagcagctcc agggtttcta cgtcgaggtc gttggtcggt tcgtccatca ccagcaggtt
     9601 ggacggctgc gcgaacagct tggccagcag caggcggttg cgctcgccgc cggacaggcg
     9661 ggtgattggc gcacgcgcac gctccggggt gaacatgaag tcctgcaggt aggcatgcac
     9721 gtgcttgcgc ttgccgttga actcgaggaa atcacggcct tcggccacgt tctcgatcgc
     9781 gctccagtct tcgcgcagca ccgcgcggta ctggtcgaaa taggcgatct gcaggttggt
     9841 accggggttg acctcaccct tggccggctg cagttcaccc agcaacagct tcagcaaggt
     9901 ggtcttgcca ctgccgttgg ggccgatcag gccgatgcgg tcgccacgca ggatggtggt
     9961 gctgaagtca cggaccatcg tgcgctcgcc gaaggcgaac gaaatatcct tgacgtcgat
    10021 gaccttcttg cccgagctga cgccctgcgc ggcttccatc ttgacgttgc cactgaggtc
    10081 gcggcgctgc gagcgttcgg tgcgcatcgc cttcaggcgg cgcacgcggc cttcgtcgcg
    10141 ggtacggcgc gccttgatgc cctggcggat ccagacttct tcctgcgcca gcagcttgtc
    10201 gaagcgggcg ttttcctgcg cctgcgcatt gaggcgttcc tcgcggcggc gctcgtaatt
    10261 ggcccagtcg cccggccagc tggtgacctg gccgcgatcg atctcgacga tgcgggtggc
    10321 cagcgcacgc aggaagcggc ggtcatgggt gacgaacacc acgctgccgc tccagccctt
    10381 caggaacgct tcgagccaat cgatggcttc gatgtcgagg tggttggtcg gttcgtccag
    10441 cagcagcaca tcggggctgg acaccagcgc gcgcgccagc agcacgcggc gcttcatgcc
    10501 gccggacagg cggccgaatt cggcgtcgcc gtcgaggtcg agcttggtca gggtttcgct
    10561 gacgcgctgg tccagtcccc agccgttggc ggcgtcgatc ttggcctgca cgttgccgag
    10621 cgcttcgcca tcgaagactt cggcgtggct gagatggtgg aactcggcca gccactggcc
    10681 cagttcgccc aggccatcgg ccacgacgtc gaacaccgag ccggcagcgc catgcggcac
    10741 ttcctgctcc aggcgggtga cacgcacgcc ctgctgcacg cggacttcgc cgtcatcggg
    10801 cttgtggtcg ccggacagca gcttgagcag ggtggatttg ccggcgccgt tgcggccgat
    10861 cagggcgatg cgttcgcccg gctcgatcga cagttcggcc ttttccagca acaacgggcc
    10921 gccgacgctg aagtcgacgt tctgcagagt aatcagaggc atccggatat tgtacgggtt
    10981 gggggcgtcg gccgggttgc acccggcacc cgcagaggca acggccgcag ccaaagcaac
    11041 gtcaaaagcg gctt
//
LOCUS       DAOKIP010000134        10980 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.134,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000134 DAOKIP010000000
VERSION     DAOKIP010000134.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 10980)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10980)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10980
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.134"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            83..2080
                     /gene="tkt"
                     /locus_tag="QEL58_002801"
     CDS             83..2080
                     /gene="tkt"
                     /locus_tag="QEL58_002801"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011348449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HDS1677251.1"
                     /translation="MTQPTRRQLANAIRFLAADAVETAKSGHPGMPMGMADIAEVLWN
                     DYLRHNPSNPHWFNRDRFVLSNGHGSMLQYALLHLSGYDLPIEQLKLFRQLGSHTAGH
                     PERHETPGVETTTGPLGQGFANAVGFALAEKLLAQRFNRPELEVVDHRTWVFMGDGCL
                     MEGVSHEAASLAGTWGLHKLVCFWDNNHISIDGNVEGWFTDNTPERFEAYGWNVVRDV
                     DGHDPDSIKAGIEAALSQSDKPTLICCRTTIGFGSPNKAGKESSHGAPLGKDELEATR
                     KQLGWEYGPFEIPQAIYDGWRANGAGTLRQAEWEQLFDKYASQYPAEASELTRRSHGE
                     LPADFVAKADAYIAQVAAEGPTIASRKASQLAIEAYAPLLPEIVGGSADLAHSNLTLW
                     KGSKSVASDDANANYVYYGVREFGMTAIANGLALHGGFIPFDATFLVFSDYARNGVRM
                     SALIPAHAIHVYTHDSIGLGEDGPTHQPVEHLASLRYIPNNDVWRPCDAVESAVCWKA
                     AITRQDGPSCLVFSRQNLPHQPRNAEQIAQIERGGYVLADAAGTPDVILIATGSEVSL
                     ATEAKAQLDAAGLKTRVVSMPSTDVFLRQDAAYRESVLPNAVRKRVAVEAGVTGFWRQ
                     FVGLDGAVIGIDTFGASAPADQLYKHFGITTAHVVEAAKSL"
     gene            2395..2673
                     /locus_tag="QEL58_002802"
     CDS             2395..2673
                     /locus_tag="QEL58_002802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014038310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HDS1677252.1"
                     /translation="MIVSFRHRGLKALYERGDISGVRADHAGRLRRLLHQLDQAQRPG
                     DMGLPGNRLHPLRGSYSGYWAVSVSASWRLVFRFRGLDVELVDYLDYH"
     gene            2685..2990
                     /locus_tag="QEL58_002803"
     CDS             2685..2990
                     /locus_tag="QEL58_002803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006465761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HigA family addiction module antidote protein"
                     /protein_id="HDS1677253.1"
                     /translation="MPLHDPPHPGESLREDILPAISMSISALAQHLGYSRGQLSTIIN
                     GHAGISAELAFRLELAGLGNARMWLAMQAAYDLWQVEHREHPPIARLHLEDSVRIGQ"
     gene            complement(3077..5029)
                     /locus_tag="QEL58_002804"
     CDS             complement(3077..5029)
                     /locus_tag="QEL58_002804"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA hydrolase"
                     /protein_id="HDS1677254.1"
                     /translation="MTEHLTDLDAAVDWLFARVDGPLRIGAPLALGKPHRLLNALYAR
                     VEQDPSRPLQLYTALSLNPPKARGNGLEARFMAPFAQRHFGDDFPRLAYADAIARDAL
                     PAHVQVEEFYMQSGALLGSRQAQSSYTSLNYTHAADAVAQRAPQVIVQKVAMRPDDRR
                     LSLSCNNDITQDTLDAIAARGLPRPLLVAEIDPQLPYLGGSATVDVSFFDLVITPPPP
                     YPALFGLPRQPVGDADYAIGLYASTLVRDGGTLQIGIGTLADALSHALVLRHTDNARY
                     RRVLHALDPQLASHPLVQEIGGLDPFEVGLYGCSEMLNEGFRRLVQTGVIKRKVHDDL
                     ALMQRIENGSTLSIDHATLDAEGEYLHGAFYLGSPEFYEWLRTLPEDECRAIGMRRIS
                     EINQLYGGNETLERLQRRHARFFNSCMMATALGAAVSDALDDGRVVSGVGGQYNFVAM
                     AHALPEARSVLMFRAARDDKGQRESNVRWNYGHTTIPRHLRDIYLNEYGIADLRGLTD
                     EDCVQAMAAITEAPFQSGLLQQAHTARKLLRATPPDPERLQRNTPQSLAAALAPFRAD
                     GSLPDYPLGSDFNEIEQVLVKALGWLKANTQTRGDKLRTVWAALRQPAGDGDAVYLQR
                     MGLQAPKDFAERLDARLLRLALARTA"
     gene            complement(5065..5622)
                     /locus_tag="QEL58_002805"
     CDS             complement(5065..5622)
                     /locus_tag="QEL58_002805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavin reductase family protein"
                     /protein_id="HDS1677255.1"
                     /translation="MKALPKEDFPVEQARRFLEPGPIVLVSTAWRGQRNLMTMGWHMV
                     MGFSPSLVATYLWHENHSHALARGSGECVINVPGVELLDTVVDIGNCSGREVDKFARF
                     GLDALPAREVGAPLVGQCHSCFECRLHDDSQVESSNLFIWEIVRAHVAPRPKLPRTVH
                     YRGDGQFMVSGAEVSRRRRFKPDML"
     gene            5741..6106
                     /locus_tag="QEL58_002806"
     CDS             5741..6106
                     /locus_tag="QEL58_002806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014648244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BlaI/MecI/CopY family transcriptional regulator"
                     /protein_id="HDS1677256.1"
                     /translation="MTPISEAEAVVMEVLWQQAPRSADEVVAALAHRDWAEPTIKTLL
                     NRLLTKGAIAAERDGRRYLYRPLLQRQAWVEAQSQDFIGRVFEGRVAPLVAHFSERGQ
                     LSAQDIAELKKLIQELDHD"
     gene            6099..7340
                     /locus_tag="QEL58_002807"
     CDS             6099..7340
                     /locus_tag="QEL58_002807"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019338738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB family protein"
                     /protein_id="HDS1677257.1"
                     /translation="MTELLDGLWQASLWLAVGVVVLATLRPLLVRLGGAGLAYRSWWL
                     LPLLMVALLVPLPRVALLQQVPTLPLKVMPGALEGASGHALPWAGLLLVAWVLGMGVC
                     LLRELRAQRRFERRMGPLRPRADGSWQASGDPGLPALVGLWRPRIVVGPAFDQQFSAQ
                     EQDLILQHERSHRRNGDHWANGALLLMRTVFWFHPLLPWAARRFLREQELACDARTMA
                     PQPALRGLYASTLLKAQLVHPVAPAVCHWRSQPVLKERIAMLKQSKRKALPWVSGQVL
                     VIGVCLGMGAVAWASQGGTAGAPRIGVEPFEHAQEDAARAGLDRPVQVDKMPPPSYPK
                     SAAEQRQVGVVNLRVEVDAQGRPADVQVLSATNPGVFDAVSVAAARSWTYRPAMKNGK
                     PVAAAVRIPITFAMDDTEDAK"
     gene            7337..7900
                     /locus_tag="QEL58_002808"
     CDS             7337..7900
                     /locus_tag="QEL58_002808"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010484079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677258.1"
                     /translation="MKRAPLLMMAALLAGCATQGRLATVDTRSENVGHQRLRPQTGDG
                     DGQVQAYSLGASEGYRMPQLYAAPDPEVGDRDPRAELAPTTICLQVVVDADGGVERSL
                     PLTDRAECTAGAAPENAPLLQAAQDAVAMWKYSSAAVCHFAPGKVPADRGDCRGAERI
                     EPVAVTLQYAFTFEIVKGQHVVRMQGR"
     gene            8173..8529
                     /locus_tag="QEL58_002809"
     CDS             8173..8529
                     /locus_tag="QEL58_002809"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677259.1"
                     /translation="MSREFGVCIFLRAGDSYHVKAPGLDFEQGLLKLAGKDIDVYIGN
                     HPSYDGVRWNRDLSPTRGFVLVGTEHSRGKDRVLLGNKRADQKGLIYVQFMGVDLAAQ
                     VPVLTRKDLVVDCGLD"
     gene            8602..9075
                     /locus_tag="QEL58_002810"
     CDS             8602..9075
                     /locus_tag="QEL58_002810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677260.1"
                     /translation="MKRSLLLVLLMLASGSTAAAVSVHIGGKPTELLTAQSPGMKVEV
                     RLGIRATTADDPRYVVCEGARSCKGVQSLQIRVNGAALPVPRSAYFDLVDLSSATIDL
                     SSKGGSLMLQGGDASESYNVRIRFNKNRVLSREIFVGTSQDGLLEETTYHEVSLG"
     gene            complement(9103..9903)
                     /locus_tag="QEL58_002811"
     CDS             complement(9103..9903)
                     /locus_tag="QEL58_002811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012481132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HDS1677261.1"
                     /translation="MSVQVQSFFHRDSNTFSYLVSDPASGEAALIDPVLDYDPDTDAS
                     SESPLHAALQAIEQQGLQLRWLLETHAHADHVSAGRRLKQRFPQATLAIGEGIRAVQA
                     TFAPRYGLQLPAADEIFDHLFSDGEIFALGELRGQVIAVPGHTSDSIAYLIGDALFTG
                     DSLFMPDGGTARCDFPGGDAAQLYRSIQRLLALPDATRVFVCHDYGPGGRDFANETTI
                     GEQRAHNIHVHDGVAEAEFVSVRQARDATLEEPKLMQPAVKANIQGGA"
     gene            complement(9915..10733)
                     /locus_tag="QEL58_002812"
     CDS             complement(9915..10733)
                     /locus_tag="QEL58_002812"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S1/P1 nuclease"
                     /protein_id="HDS1677262.1"
                     /translation="MKALHSLFLAAALAPALLSVSAPAHAWGAQGHRLVAEVADARLT
                     PAARAEVDRLLATEPDATLASIAPWADQLRAKDPGLGRRSAGWHYVNIAEDNCHYEAP
                     KHCKNGNCIVEALKAQSAILGDRSLTNGERLQALKFVVHLVGDIHQPMHAGYAHDKGG
                     NDFQLQFGNRGTNLHSLWDSGMLNTRKLDDAGYLPVLQSQRAPKLARQSNPQRDPQTW
                     AEASCRISMQAGVYPASRKIGDEYTERYRPLAEAQLRLAGENLAQLLNRVLGMR"
BASE COUNT         1843 a         3444 c         3754 g         1939 t
ORIGIN      
        1 gctggaactg acccctgccc ggtgactatg ggacaatagg ccgcccgcac gtccgcggcc
       61 gcctcccgat tccgacagaa ccatgacgca gcctacccgt cgccagttgg ccaacgccat
      121 ccgcttcctt gccgccgatg cggttgaaac cgcaaagtcc ggccaccccg gcatgcccat
      181 gggcatggcc gacatcgccg aagtcctctg gaacgactac cttcgccata acccgagcaa
      241 cccgcactgg ttcaaccgcg accgtttcgt gctgtccaac ggccacggtt cgatgctgca
      301 gtacgcgctg ctgcacctga gcggttacga cctgccgatc gagcagctga agctgttccg
      361 ccagctgggc agccacaccg ccggccatcc ggaacgccac gagaccccgg gcgtggaaac
      421 caccaccggc ccgctgggcc agggtttcgc caacgccgtg ggctttgccc tggccgagaa
      481 gctgctggca cagcgcttca accgcccgga gctggaagtg gtcgaccacc gcacctgggt
      541 gttcatgggc gatggctgcc tgatggaagg cgtgtcgcat gaagcggcgt cgctggccgg
      601 cacctggggc ctgcacaagc tggtctgctt ctgggacaac aaccacatct ccatcgacgg
      661 caacgtcgag ggctggttca ccgacaacac cccggaacgt ttcgaggcct atggctggaa
      721 cgtggtccgc gatgttgatg gccacgaccc ggacagcatc aaggccggca tcgaggccgc
      781 gctgtcgcag agcgacaagc cgaccctgat ctgctgccgc accaccattg gttttggttc
      841 gccgaacaag gcgggcaagg aatccagcca cggcgcaccg ctgggcaagg acgagctgga
      901 agccacccgc aagcagctgg gttgggaata cggtccgttc gagatcccgc aagcgatcta
      961 cgacggctgg cgcgccaatg gcgccggcac cctgcgccag gccgagtggg agcagctgtt
     1021 cgacaagtac gccagccagt atccggcgga agcgtccgag ctgacccgtc gttcgcacgg
     1081 cgagctgccg gccgacttcg ttgccaaggc cgatgcctac atcgcccagg tggccgccga
     1141 aggcccgacg atcgcctcgc gcaaggcctc gcagctggcc atcgaagcct acgccccgct
     1201 gctgccggaa atcgtcggcg gctcggccga cctggcgcac tccaacctga ccctgtggaa
     1261 gggcagcaag tcggtcgcca gcgacgacgc caacgccaac tatgtgtact acggcgtgcg
     1321 cgagttcggc atgaccgcga ttgccaacgg cctggcgctg cacggtggct tcattccgtt
     1381 cgacgccacc ttcctggtgt tcagcgatta cgcgcgcaac ggcgtgcgca tgagcgcgct
     1441 gatcccggcc catgccatcc acgtctacac ccacgactcg atcggcctgg gcgaagacgg
     1501 cccgacccac cagccggtgg agcacctggc ctcgctgcgc tacatcccga acaacgatgt
     1561 gtggcgcccg tgcgatgcgg tcgagtcggc agtgtgctgg aaggccgcga tcacccgcca
     1621 ggacggcccg agctgcctag tgttcagccg ccagaacctg ccgcaccagc cgcgcaacgc
     1681 cgagcagatc gcccagatcg agcgcggtgg ctacgtgctg gccgatgccg ccggtacccc
     1741 ggacgtgatc ctgatcgcga ccggttcgga agtctcgctg gcgaccgaag ccaaggctca
     1801 gctggatgcg gccggcctca agacccgcgt ggtctcgatg ccgtccaccg acgtgttcct
     1861 gcgccaggat gcggcctacc gcgaatcggt gctgccgaac gccgtgcgca agcgcgtggc
     1921 cgtggaagcc ggcgtcaccg gcttctggcg ccagttcgtc ggcctggacg gtgcggtgat
     1981 cggtatcgac accttcggtg cctcggcccc ggccgaccag ctgtacaagc acttcggcat
     2041 caccaccgcc cacgtggtgg aagctgcgaa gtcgctgtaa gccgcctcgc ggtgcaacaa
     2101 gggaaaggcc ggcacacgcc ggcctttttc gttcttcaga gtggagaaaa aggggacgga
     2161 ggggattaag tcgtttgtgc acatgcgact tatcttctcc gtccccttct cttttgcccg
     2221 aaatgttcca cccagcggca ccagtgtcgc gttggcctct tcatctgacc tgcattcctt
     2281 gcgaaaagga gggcctgccg aggcaccctc agaagtggtc atggacaaga agatcggcgc
     2341 agaaaaccat ggtggatttg cggggtgtaa ggtgatgcct tacactggtg ccgcgtgatc
     2401 gtcagcttca ggcacagggg tctgaaggcg ctctatgaac ggggcgacat ttcaggcgtt
     2461 cgtgccgatc atgcggggcg gttgcggcgc ttgcttcacc agctggacca agcccagcgt
     2521 cctggagaca tgggcttgcc tggaaatcgc ctgcatcctc tgcgcggaag ctatagcggc
     2581 tactgggctg taagtgtctc cgcgagttgg cgattggtat tccgctttcg tgggctcgac
     2641 gtcgaattgg tcgattacct cgattaccac taggagtctg ctcgatgccg ttgcatgatc
     2701 cgccgcatcc cggggaatcg ctgcgcgaag acatactgcc ggcgatcagc atgtccatca
     2761 gtgcgctggc gcagcatctt ggttattccc gcggacagct gtcgaccatc atcaacgggc
     2821 acgccggtat ctccgcggag cttgcattcc gccttgagct tgcaggtctg ggcaatgcgc
     2881 gcatgtggct ggcaatgcag gcggcctatg acctgtggca ggtcgagcat cgagagcatc
     2941 caccgattgc ccgcctgcat cttgaggatt cggtgaggat cggacagtag atccgcgcca
     3001 tgcgtggatg aaaaaaggga cggaggggat taagtcgctt gtgcagaaac gacttaatcc
     3061 cctccgtccc cttttttcag gcggtgcgcg ccagcgccag gcgcagcagg cgtgcgtcca
     3121 ggcgctcggc gaaatccttc ggtgcctgca ggcccatgcg ctgcaggtac accgcatcgc
     3181 catcaccggc cggttggcgc agcgccgccc acaccgtgcg caatttgtcg ccacgggtct
     3241 gcgtattggc cttcaaccag cccagcgcct tcaccagcac ctgttcgatc tcgttgaagt
     3301 cgctgcccag cggatagtcc ggaaggctgc catcggcgcg gaacggtgcc agtgccgcgg
     3361 ccagtgactg cggcgtgttg cgctgcaggc gttcgggatc cggcggcgtg gccctcaaca
     3421 gcttgcgcgc ggtgtgcgcc tgctgcagca ggccggactg gaacggtgcc tcggtgatcg
     3481 cggccatcgc ctgcacgcag tcctcgtcgg tcaacccgcg cagatcggcg atgccgtatt
     3541 cgttgaggta gatatcgcgc aggtggcgcg ggatggtggt gtggccatag ttccagcgca
     3601 cgttggattc acgctggccc ttgtcatcgc gcgcggcgcg gaacatcagc acgctgcggg
     3661 cttccggcag ggcatgtgcc atcgccacga agttgtactg gccgcccacc ccggatacca
     3721 cgcggccgtc atccagcgcg tccgagaccg ccgcacccag cgcggtggcc atcatgcagg
     3781 agttgaagaa gcgcgcatgg cggcgctgca ggcgctccag cgtctcgttg ccgccgtaca
     3841 gctggttgat ctcgctgatg cggcgcatgc cgatcgcgcg gcattcgtct tccggcaggg
     3901 tgcgcagcca ttcgtagaac tccggtgagc cgaggtagaa cgcgccgtgc aggtactcgc
     3961 cctcggcgtc cagcgtggca tggtcgatcg acagcgtgct accgttctcg atgcgctgca
     4021 tcagcgcgag gtcgtcgtgc accttgcgct tgatcacccc ggtctgcacc agccgccgga
     4081 agccctcgtt gagcatttca ctgcagccgt acaagcccac ttcaaagggg tccagcccgc
     4141 cgatttcctg caccagcgga tggctggcca gctgtgggtc gagtgcatgc aacacgcggc
     4201 gatagcgcgc attgtcggta tggcgcagca ccagtgcgtg gctgagcgca tcggccagcg
     4261 taccaatgcc gatctgcagc gtgccgccat cgcgcaccag ggtgctggca tacaggccga
     4321 tggcatagtc tgcatcgcca accggctgcc gcggcaggcc gaacagcgcc gggtacggcg
     4381 gcggcggggt gatcaccaga tcgaagaacg acacatcgac ggtggccgag ccgcccaggt
     4441 agggcagctg cggatcgatc tcggcgacca gcagcgggcg cggcagtccg cgcgcggcga
     4501 tggcatccag cgtgtcctgg gtaatgtcgt tgttgcacga cagcgagagc cgccggtcat
     4561 ccgggcgcat cgccactttc tgcacgatca cctgcggcgc gcgctgggcg accgcatcgg
     4621 cggcgtgggt gtagttcagg ctggtatagc tggactgcgc ctgccgcgaa ccgagcaggg
     4681 cgccggactg catgtagaac tcttccacct gcacatgtgc cggcaacgcg tcgcgcgcga
     4741 tcgcatcggc ataggccagg cgcgggaaat cgtcgccaaa atggcgctgc gcgaacgggg
     4801 ccatgaagcg cgcttccagg ccattgccgc gcgccttcgg cgggttcagc gacagcgcgg
     4861 tatacagctg cagtggccgc gacggatcct gctcgacgcg tgcatacagc gcattgagca
     4921 gccgatgcgg cttgcccagt gccagtggcg ccccgatccg cagcggcccg tccacgcgcg
     4981 caaacaacca gtcgacagcg gcgtccaggt cggtgaggtg ttcggtcatt cggggcggtc
     5041 ctgcgtctgg ggggagtgcc ggcattacag catgtcgggc ttgaaccgcc gtcgacgcga
     5101 gacttcggcg ccggacacca tgaactgccc atcgccgcgg taatgcaccg tgcgcggcag
     5161 tttcggccgc ggcgccacgt gcgcacgcac gatttcccag atgaacaggt tgctcgattc
     5221 cacctggctg tcgtcatgaa ggcggcactc gaagcacgaa tggcattgcc cgaccagcgg
     5281 cgcgccgacc tcgcgcgcgg gcagtgcatc cagcccgaaa cgggcgaatt tgtcgacctc
     5341 gcggccgctg cagttgccga tgtccacgac cgtatcgagc agctccacgc cgggaacatt
     5401 gatcacgcac tcgccgctgc cgcgcgccaa tgcgtggctg tggttctcgt gccacaggta
     5461 ggtggcgacc agcgaaggcg agaagcccat caccatgtgc caacccatcg tcatcaggtt
     5521 gcgctggccg cgccacgcgg tgctgaccag cacgatcgga ccgggttcga ggaagcggcg
     5581 ggcctgctcg accgggaaat cttccttggg cagcgctttc atccggggcc tggggcggga
     5641 ggaaccgatg ctggcgcagc cgggatgaac ccggagtcga ggggcttgac atgaggttcg
     5701 attacgcgcg taatcaattc gtcgattacg gatgtaaacc atgaccccga tcagcgaagc
     5761 cgaagccgtt gtgatggagg tgctgtggca gcaggcaccg cgtagcgccg acgaggtggt
     5821 ggccgcactg gcccaccgcg actgggccga gccgactatc aagaccctgc tcaaccgcct
     5881 gctgaccaag ggcgcgatcg ccgccgagcg cgatggccgg cgctatcttt accggccgct
     5941 gctgcagcgc caggcgtggg tggaggcaca gagccaggac ttcatcggtc gcgtcttcga
     6001 aggccgggtg gcaccgctgg tggcgcactt cagcgaacgc ggccagctga gcgcgcagga
     6061 catcgccgaa ctgaagaagc tgatccagga gctggaccat gactgagctg ctcgacggac
     6121 tatggcaggc cagcctgtgg ctggcggtgg gcgtggtcgt gctggccacg ctgcggccgt
     6181 tgctggtgcg actggggggc gctggattgg cctatcgcag ctggtggttg ctgcccttgc
     6241 tgatggtggc gctgctggtg ccgctgcccc gggttgcatt gctgcagcag gtgccgacgc
     6301 tgccgctgaa ggtgatgccg ggcgccctcg agggcgcgag cggtcatgcg ctgccatggg
     6361 ccggtctgct gctggtggcc tgggtactgg ggatgggcgt ctgcctgctg cgcgagctgc
     6421 gtgcacagcg gcgcttcgag cggcgcatgg gcccgttgcg gccgcgtgcc gatggcagct
     6481 ggcaggccag cggtgatccc gggctgccgg cgctggtcgg tttgtggcgg ccgcgcatcg
     6541 tggtcggccc ggcgttcgac cagcagttca gcgcacagga gcaggacctg atcctgcagc
     6601 acgagcgcag ccaccgtcgc aatggtgacc actgggccaa tggtgcgctg ctgctgatgc
     6661 gcacggtgtt ctggttccac ccgctgttgc cctgggccgc acgccgtttc ctgcgcgagc
     6721 aggaactggc ctgtgatgcc cgcaccatgg ccccgcagcc tgcgctgcgc ggcctctacg
     6781 ccagcacgct gctgaaggcg cagctggtcc atccggttgc gcccgcggtc tgccattggc
     6841 gcagccaacc cgtgttgaag gagcgtatcg ccatgttgaa gcagtccaag cggaaggcat
     6901 tgccgtgggt gtcgggccag gtgctggtga tcggggtgtg cctggggatg ggagcggtgg
     6961 cgtgggccag ccagggcggt acggcgggag cgccgaggat cggggtcgag ccgtttgaac
     7021 acgctcagga ggacgcagcc agggctgggc tggaccgacc cgtccaggtc gacaagatgc
     7081 cgccgccgtc ctatccgaag tctgcggccg aacagcgcca ggtgggcgtg gtgaacctgc
     7141 gcgtggaggt ggatgcacag gggcgtcccg ccgatgtcca ggtgctcagc gctaccaatc
     7201 cgggcgtgtt cgatgcggta tcggtggctg ctgcgcgcag ctggacctat cgtccggcaa
     7261 tgaagaacgg taagccggtg gccgctgccg tgcgtattcc gatcaccttc gcgatggacg
     7321 acaccgagga cgcgaagtga agcgcgcgcc gctgttgatg atggcggcgc tattggcagg
     7381 gtgcgcgacc cagggccggc tggccaccgt cgatacccgc agcgagaatg tcggccacca
     7441 gcgcctgcgg ccgcagaccg gcgacggcga tggacaggtg caggcgtact cgctgggcgc
     7501 gagcgagggc taccggatgc cgcagctcta cgcggcaccg gacccggagg tcggtgatcg
     7561 tgatccgcgc gcggaactgg caccgaccac catctgcctg caggtggtgg tggacgccga
     7621 tggcggtgtg gaacgcagcc tgccattgac cgatcgtgct gagtgcacag ccggggccgc
     7681 acctgagaac gcgcccttgt tgcaggcggc tcaggacgcg gtggcgatgt ggaagtactc
     7741 ctcggcggcg gtctgccatt tcgcaccggg caaggtgccg gcggatcgcg gcgattgccg
     7801 cggcgcggag cgcatcgagc cggtggcggt gaccctgcag tacgccttca ccttcgagat
     7861 cgtgaagggg cagcatgtgg tgcggatgca ggggcggtag cggcgggctt gctgtcgggc
     7921 acgaagatgt aagagggttg ttgacaatag ccggttccgg gcgtaacccg gtggctggcg
     7981 gcaccatgag ccgcaacttc aatggcgcca ggccggatgg gaagaatctg gaagatgttc
     8041 tggatcccgg gaaggacaga accatcgtga gagggtgcag ctatgcgagc caatagcaag
     8101 aggctgcttt tccttgcctg cctgggctgc ctcggtgcat gtacgcaccg cgacggcgac
     8161 gctccaactc cgatgagccg cgagttcggg gtgtgcattt tccttcgggc cggtgacagc
     8221 taccacgtga aggccccggg actggatttt gaacagggat tgttgaagct ggctggcaag
     8281 gacattgatg tctacatcgg gaatcatcct tcctacgatg gcgttcgatg gaaccgggat
     8341 ctgagcccga cccgtggatt cgtgctggtc ggcacggagc attcaagagg taaagatcga
     8401 gtgctgctcg gcaacaagcg cgcagaccag aaaggcctga tctacgtgca gttcatgggt
     8461 gttgaccttg cggcgcaggt tcccgttctg acgcgcaagg atctggtagt ggattgtgga
     8521 ctggattgag gtaagcgggt ctgcgaaggt cccgcagcca atacccgccc ttaccccgtt
     8581 cttctcgccg cgggatctca catgaagcgt tcgcttttac tcgttctgct gatgctggca
     8641 tcaggctcga cggctgcagc ggtttcagtg cacatcgggg gcaagccaac ggagcttctg
     8701 accgcgcaat ctccgggtat gaaggtcgaa gtgcgactgg gcattcgtgc tacaacggcc
     8761 gacgatccgc gctacgtagt ctgcgaaggc gcgcgctcct gcaaaggagt gcaatcgctg
     8821 cagatccgag tcaatggtgc tgccttgcct gttccgcgct ccgcctattt cgatctggtg
     8881 gatctttcca gtgcgacgat tgatctcagc tccaagggcg gcagcctgat gttgcagggc
     8941 ggggatgcct cagagagtta caacgtgcgc attcgcttca acaagaaccg ggtcctgtcg
     9001 agagagatct ttgttggaac gtcgcaggat ggcctgttgg aggaaaccac ctatcacgag
     9061 gtgagcctcg gataggcgct tctctggctg tccacctgga cctcaggctc cgccctggat
     9121 gttggccttc accgccggct gcatcagctt gggttcttcc agcgtggcat cgcgggcctg
     9181 gcgcacgctg acgaactccg cctcggccac accatcgtgc acgtggatgt tgtgcgcgcg
     9241 ctgttcgccg atggtggttt cgttggcgaa atcacggccg cccgggccat agtcgtggca
     9301 gacgaacacg cgggtggcat cgggtagcgc cagcaggcgc tggatcgagc ggtacagctg
     9361 cgctgcatca ccgcccggga aatcgcagcg ggcggtgccg ccgtcgggca tgaacagcga
     9421 gtcgccggtg aacagcgcat cgccgatcag gtaggcgatg ctgtcgctgg tgtggccggg
     9481 cacggcgatc acctggccgc gcagttcgcc aagcgcaaag atttcgccat cgctgaacag
     9541 gtggtcgaag atttcatccg cagcaggaag ctgcagtccg tagcgcggcg caaaagtggc
     9601 ctgcaccgcg cggatgcctt cgccgatggc cagcgtggcc tgcgggaagc gctgcttgag
     9661 ccggcgcccg gccgacacat ggtcggcgtg ggcatgggtt tccagcagcc agcgcagctg
     9721 caggccctgt tgttcaatgg cctgcaacgc ggcatgcagc ggtgattcgc tgctggcatc
     9781 agtatccggg tcgtagtcca gcaccgggtc gatcagcgct gcctcgccgc tggccgggtc
     9841 gctgaccagg tagctgaagg tgttgctgtc acggtggaag aacgactgca cctggactga
     9901 cattggaacg ctcctcagcg catgccgagc acgcggttca gcaactgcgc caggttctca
     9961 ccggccagtc gcagctgcgc ttcagccagc ggccggtagc gctcggtgta ttcgtcgccg
    10021 attttacgcg atgccggata aacgccagct tgcatggaga tgcggcagct ggcttcggcc
    10081 cacgtctgcg ggtcgcgctg cgggttggac tggcgcgcca gcttcggcgc acgctggctc
    10141 tgcagcaccg gcagatagcc ggcgtcgtcc agcttgcggg tgttgagcat gccgctgtcc
    10201 cacagcgagt gcaggttggt accacggttg ccgaactgca gctggaaatc gttgccgccc
    10261 ttgtcgtggg catagccggc gtgcatcggc tggtggatgt cgccgaccag gtgcacgacg
    10321 aacttcagcg cctgcaggcg ctcgccgttg gtcaggctgc ggtcgccgag gatggcgctc
    10381 tgtgccttca gcgcctcgac gatgcagttg ccgttcttgc agtgcttcgg ggcttcgtag
    10441 tggcagttgt cttcggcgat gttgacgtag tgccagccgg ccgagcgacg gcccaggccc
    10501 gggtccttgg cgcgcagctg gtcggcccag ggcgcgatgc tggccagggt ggcgtccggt
    10561 tcggtggcca gcaggcgatc cacttcggcg cgggcggcag gggtgagtcg ggcgtctgcg
    10621 acttcggcga caaggcggtg gccttgcgcg ccccaggcat gggcgggggc ggagacggac
    10681 agcagggccg gcgccagggc ggcggcgagg aagagggagt gcagggcttt catgcgcaca
    10741 ttctagccgg gggtaggtgg attgaagagc ggcgcgttcc cgtttcgaag tgggtgggct
    10801 gcaggggcag gcgctgcagc ccccatcaga catggccgcg gaggcgaatg caaaggtcaa
    10861 agcaacatca aaatcaaatg caggatcaaa acctgcctcc tgcaattgca ggcaaccatt
    10921 acgcctcgga tgtacaggtt ctgcttctgc tcttgccttt gcttgagctg gcacgcgcgc
//
LOCUS       DAOKIP010000135        10643 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.135,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000135 DAOKIP010000000
VERSION     DAOKIP010000135.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 10643)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10643)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10643
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.135"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            46..441
                     /gene="flgB"
                     /locus_tag="QEL58_002813"
     CDS             46..441
                     /gene="flgB"
                     /locus_tag="QEL58_002813"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003482950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body rod protein FlgB"
                     /protein_id="HDS1677263.1"
                     /translation="MRNLITDYLGVHAQAMPLREQRMKLIASNLGNADTPGYKAQDLD
                     FDAALRHAQGQDPNGLMATTHEQHYEISSGLNPFQIAREGVQPSLDGNTVDPDAERAA
                     YGRAALEYRASLSFVESKVRSMLTAITGQ"
     gene            445..852
                     /gene="flgC"
                     /locus_tag="QEL58_002814"
     CDS             445..852
                     /gene="flgC"
                     /locus_tag="QEL58_002814"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004425624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body rod protein FlgC"
                     /protein_id="HDS1677264.1"
                     /translation="MSNLPIFDIAGSALQAQSVRMSTIASNLSNADTVAGSADAVYKP
                     LEPIFQAVTSKNDPNITSVKVKEITQSEAAPIKRYEPGHPLADADGYIYQPDVDPVAQ
                     MVNLISTSRNYQAGVEMLTTAKELALATLTMGR"
     gene            876..1559
                     /gene="flgD"
                     /locus_tag="QEL58_002815"
     CDS             876..1559
                     /gene="flgD"
                     /locus_tag="QEL58_002815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409574.1"
                     /note="acts as a scaffold for the assembly of hook
                     proteins onto the flagellar basal body rod; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook assembly protein FlgD"
                     /protein_id="HDS1677265.1"
                     /translation="MTTSVNNQTNQDVYAALGLNAPNSNATKKKNTLDQADFLRLMTE
                     QLQHQDPLKPMDNTQMVAQMAQMSTVQGITDLNKTVKGFQESMASDQVLRGAALVGHQ
                     VLVPSEKLVLEKEGSVEGTVAAPSAGIITVDITDANGTKVTSLSVEAKAAGETAFKWD
                     GKDANGKRMEPGKYSVVANHVDTAGKSTKLSTYVQAPVESVTVGSDGLYLNLKGLGTA
                     PIDYVLRVS"
     gene            1592..2815
                     /gene="flgE"
                     /locus_tag="QEL58_002816"
     CDS             1592..2815
                     /gene="flgE"
                     /locus_tag="QEL58_002816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017159265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook protein FlgE"
                     /protein_id="HDS1677266.1"
                     /translation="MGFNVSLSGINAANSDLSVTANNVANVNTTGFKESRAEFADLFS
                     ATGYGLSKNAVGSGVRVSNVAQQFKQGHNEQTGRSLDMAISGEGFFTMNMNGTRVYSR
                     AGNFQTDASGFVVNPQGARLQVFAPNADGTNFDSGRIVDLQLLTTDSAPKQTSEVKVG
                     FTLPANAKPPTVTTFDPTDSNTYNHSSGGITVYDSLGVSHIQVSYFVKGANPNEWTVR
                     NYVDGQPAGTPTPVTFDNSGKLTAPTDGKVSLGTFTPNTGAGQLNMTLDITGSTQYGE
                     KFALRNTQQDGYAAGKLNEITVSETGVVYARYSNGADKPLGQVALTTFNNPQGLESKG
                     NNLWVDTFSSGTPRTGMPDTSNLGKIQAGSLEASTVDLTEQLVNMITAQRNFQANAQM
                     ITTQDQITQTVINIR"
     gene            2848..3597
                     /locus_tag="QEL58_002817"
     CDS             2848..3597
                     /locus_tag="QEL58_002817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010485898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body rod protein FlgF"
                     /protein_id="HDS1677267.1"
                     /translation="MDKALYVAMTGARASLQAQGTLSHNLANSDTPGFKEALANTEAF
                     PIRGPGFASRVDALHVDAGFNRRPGAQHITGKPLDLALQTGTWLAVQSSDGSEAYTRG
                     AALSVTPNGQLVTSSGRPVLDDNNNPIAIPPYQAMEIGADGTISIIPQGEGPQTMAQV
                     GRIKVVQAPDERLERGLDGLFRNTDPQQPFAPAQGTAVHSGQLEGSNVDAAGALVQMI
                     QLQRQYEMQVQVIKHGDDNARSANSLLRLGS"
     gene            3700..4485
                     /gene="flgG"
                     /locus_tag="QEL58_002818"
     CDS             3700..4485
                     /gene="flgG"
                     /locus_tag="QEL58_002818"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016901723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal-body rod protein FlgG"
                     /protein_id="HDS1677268.1"
                     /translation="MNQALWIAKTGLDAQQMRMSVVSNNLANTNTTGFKQDRASFEDL
                     LYQQVRQPGGSSSAQTQLPTGLQLGTGVRVVATAKNFEQGGQQQTGRALDVMVNGRGF
                     FEVQMPDGSSAYTRDGSFKINQDSELVTNSGYPVQPGIQIPEGAQSVTIGTDGTISVK
                     MADGAASVEVGALTLTDFVNPAGLQARGENLFLETTASGPAQNGNPGLNGLGTVVQGA
                     LEGSNVNVVEELVSMIETQRAYEMNAKAISTTDSMLGYLNNKL"
     gene            4508..5200
                     /gene="flgH"
                     /locus_tag="QEL58_002819"
     CDS             4508..5200
                     /gene="flgH"
                     /locus_tag="QEL58_002819"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016901722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body L-ring protein FlgH"
                     /protein_id="HDS1677269.1"
                     /translation="MSPISTFARTALACAVAALLGGCVIAGDVRPYAAMAPIQPIMPP
                     QAAPTAGAIYAAGPTLQLYSDRRARDVGDLLTITLLENTTAQTSANTATNKESNLNLG
                     TPSILGAPVTLGGKDILSASATGKRDFTGKGNSAQSNRLQGSVTVTVVQRLPNGNLVV
                     QGQKNLRLNQGDELVQVQGIVRPGDISQDNTIPSSRVAEARIVYGGRGPVAQSNAMGW
                     LSRFFNSGLTPF"
     gene            5203..6345
                     /locus_tag="QEL58_002820"
     CDS             5203..6345
                     /locus_tag="QEL58_002820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006443848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body P-ring protein FlgI"
                     /protein_id="HDS1677270.1"
                     /translation="MAMKALFSSTWQRRIASLYGSFFLLLAMAAPASAERIKDLAQVG
                     GVRGNALVGYGLVVGLDGSGDRTSQAPFTVQSLKNLLGELGVNVPPNVNPQLKNVAAV
                     AIHAELPPFAKPGQPIDITVSSIGNAVSLRGGSLLMAPLRGADGQIYAIAQGNLIVGG
                     FGAQGKDGSRVSVNVPSVGRIPNGATVERALPDPLANGGDITLNLHNNDFTTVSRMVA
                     ALNNAFGEGAARAVDGVTVAVTAPTDPGARIGLLARIENLELTPGSAPAKVVVNSRTG
                     TVVIGQQVRVGPAAISHGSLTVTIQENTNVSQPNALSGGRTVASPQSTITATNDGSRM
                     FKFSGGTTLDEIVHAVNAVGAAPGDLIAILEALKQAGALSAELEVI"
     gene            6347..7546
                     /gene="flgJ"
                     /locus_tag="QEL58_002821"
     CDS             6347..7546
                     /gene="flgJ"
                     /locus_tag="QEL58_002821"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003482966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar assembly peptidoglycan hydrolase FlgJ"
                     /protein_id="HDS1677271.1"
                     /translation="MRINPAFDLHPAQQNDPAKIDKVARQLEGQFAQMLVKSMRDASF
                     GDSLFPGENKMFRDMYDQKIAEAMTRGKGLGLSGMISRQLSGQATDGPALDTRVDPAK
                     ASRAYQLNAPARPAPSLPLEDGSQAVRLLQQMAAGAQSGAQAAVAPMEQALDLIAGRE
                     SSSMHRALGTDDPYIGSLQGDDWAAGSDQWSATASNRGTAISPADALATRTAVAQLGE
                     HTPEGFVASIWQHAQSAAKELGVDARALVAQAALETGWGKRHIKHADGSTSHNLFGIK
                     ANGWSGQRAVAGTHEYVDGVRRNETASFRAYSSPAESFADYVRLLKTSPRYQQALQAG
                     TDVQGFARGLQRAGYATDPRYAAKIAAIAGGPTIERAVSAVADAGTRLGQTFASTATA
                     ALGITRR"
     gene            7555..9435
                     /gene="flgK"
                     /locus_tag="QEL58_002822"
     CDS             7555..9435
                     /gene="flgK"
                     /locus_tag="QEL58_002822"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005413269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-associated protein FlgK"
                     /protein_id="HDS1677272.1"
                     /translation="MSSVLSTGTGALLAFQRALATTSHNVANLNTPGYSRQKVNFATA
                     DPQNYGYGTVGNGTRITDIRRTADQLAISRLLDSSGELARLKQLSGMADRVNSLFSEG
                     ATNIAGVWSNFFDSVSGLSSNASGTADRQNMLDGGKALANRFVQLNTHLNNLNGEVNN
                     GLLAGATEVNRLAQEIAQINGAIGTNIANAAPDLLDRRDQLITQLIGYTGGTAVIQDG
                     GIMNVYTAGGNALVVGTTATKVTTVADPYQPERLQLALETQGNTIRLDAKAVGGQIGG
                     LLEFRDTVLTPAQAELGKLAVGLAETFNQTHHQGVDMYGQLGGDFFNIGNPRVTANNA
                     NTGTASLSATYGDLGKLDAQNVVLQFDGTQWKASRADTGANVPLTGTGTAADPLVING
                     VKLVVGGTPAANDRFLLQPTAGVAGSMEVAITDPSRIAAAAAVKGAAATSNTGTGKLS
                     GVTVSDSTNANLRNPAAIVFTSATTYTIDGGPPQTYTPGQTISANGWSFVLDGAPKVG
                     DTFNITPTPAGSSDNSNASRLAKVESAKAFNSGTVTLNGALGGLTTQVGAAARSAEYS
                     LEAQLVINDKAQEARDEVSGVNLDEEAADMLRLQQAYQAASQLISTADSMFQTILGAV
                     RR"
     gene            9432..10634
                     /gene="flgL"
                     /locus_tag="QEL58_002823"
     CDS             9432..10634
                     /gene="flgL"
                     /locus_tag="QEL58_002823"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-associated protein FlgL"
                     /protein_id="HDS1677273.1"
                     /translation="MSSRISTSMMFNQSVSLMMAKQAKLSHLEQQIATGSKIVSAKDD
                     PVAAGAAVGLDRSLAALDRMKLNAGNVQNRLGVQENTLAQVNDLMARVNDLTIQASNP
                     ALSAPDKKTLITELNQIRDGLLSLANADDGTGRYVFGGTNDGDPPFAKINGKVVYRGD
                     QTQRQIEVGPDTYVRDALPGSEIFMRIPTGDGFVDGGAAAGNTGNGVLTNITRDGSDS
                     WNGQAFSIRFTAADQYQVLDGAGNVTGTGTYKAGDNVEVNGVRLQITGAPAAGDSFNV
                     TPASSRDIFDTMDKLIAALDADTGTTAKMSAQQNELQSALRDVARASERMIDSRAAGG
                     AQLKALDNAADMREANGVTLKTTLSQMRDLDYADALSQYQLQSTALQAAQTIFSQMQS
                     MSLFNKIR"
BASE COUNT         2071 a         3793 c         3289 g         1490 t
ORIGIN      
        1 acaccgcttg cagcttcccg ggcaacgttc ccgtgggagt gcaccgtgcg caacctgatt
       61 accgactacc tgggcgtcca tgcccaggcc atgccgttgc gcgaacagcg gatgaagctg
      121 atcgccagca acctcggcaa tgccgacacg cccggctaca aggcccagga cctggacttc
      181 gacgccgccc tgcgccacgc ccaggggcag gatcccaatg gcctgatggc caccacccac
      241 gagcagcact acgaaatcag tagtggcctg aatccgttcc agatcgcgcg cgaaggcgtg
      301 cagcccagcc tggacggcaa caccgtcgat cccgatgccg agcgcgctgc ctatggccgc
      361 gctgcgctcg agtaccgcgc ctcgctcagc ttcgtcgaga gcaaggtgcg ttccatgctg
      421 accgcgatca cggggcaata agccatgagc aacctgccga tcttcgacat cgccggctcc
      481 gcgctgcagg cgcagtcggt gcgcatgagc accatcgcct ccaacctctc caacgccgac
      541 accgtggccg gttccgccga cgccgtgtac aagccgctgg aaccgatctt ccaggccgtc
      601 accagcaaga acgatccgaa catcacctcg gtgaaggtga aggagatcac ccagagcgag
      661 gccgcgccga tcaagcgcta cgagcccggc catccgctgg ccgacgccga cggctacatc
      721 taccagcccg atgtcgatcc ggtggcgcag atggtcaacc tgatctcgac ctcgcgcaat
      781 taccaggccg gcgtggagat gttgaccacg gccaaggaac tggcgctggc caccctgacc
      841 atgggccgct gaggcccgca gtaccggata ccgccatgac cacctccgtc aacaaccaga
      901 ccaaccagga cgtctacgcc gcgctcggcc tgaacgctcc gaacagcaac gccacgaaaa
      961 agaagaacac gctggaccag gccgacttcc tgcggctgat gaccgaacag ctgcagcacc
     1021 aggatccgct gaagccgatg gacaacacgc agatggtcgc gcagatggcg cagatgtcga
     1081 ccgtgcaggg catcaccgat ctgaacaaga cggtgaaggg cttccaggaa tcgatggcca
     1141 gcgaccaggt gctgcgtggt gcggcgctgg tcggccacca ggtgctggtg ccgtcggaaa
     1201 agctggtgct ggagaaggaa ggcagtgttg aaggcacggt cgccgcaccc tcggccggca
     1261 tcatcaccgt ggacatcacc gatgccaatg gcaccaaggt cacctcgctg agcgtggagg
     1321 ccaaggctgc cggcgaaacc gccttcaagt gggacggcaa ggacgccaac ggcaagcgca
     1381 tggaacccgg caagtacagc gtggtggcca accacgtcga caccgccggc aagagcacca
     1441 agctgtccac ctacgtgcag gccccggtgg aaagcgtgac cgtcggttcc gacggcctgt
     1501 acctgaatct caagggcctg ggcacggccc cgatcgacta cgtgctccgc gtcagctgag
     1561 ccgcacatcc cgcacttacc aggagcatcc catgggcttc aatgtctcgc tgtccggcat
     1621 caatgccgcc aactccgacc tgagcgtcac tgccaacaac gtcgccaacg tcaacaccac
     1681 cggcttcaag gagtcgcgcg ccgagttcgc cgacctgttc tcggccaccg gctacggcct
     1741 gtcgaagaac gccgtgggtt cgggcgtgcg cgtctccaat gttgcccagc agttcaagca
     1801 gggccacaac gaacagaccg gccgcagcct ggacatggcc atttccggtg agggcttctt
     1861 caccatgaac atgaacggca cccgcgtgta ttcgcgcgcc ggcaatttcc agaccgacgc
     1921 gtccggcttc gtggtcaatc cgcagggcgc acgcctgcag gtgttcgcac cgaatgccga
     1981 cggcaccaac ttcgattccg gccgcatcgt cgacctgcag ctgctgacca ccgacagcgc
     2041 gccgaagcag accagcgaag tgaaggtcgg cttcaccctg ccggccaacg ccaagccgcc
     2101 gaccgtcacc accttcgacc cgaccgactc caacacctac aaccactcca gtggtggcat
     2161 caccgtgtac gactcgctgg gcgtgagcca catccaggtc tcgtacttcg tcaagggggc
     2221 caaccccaat gagtggaccg tgcgcaacta cgtggacggc cagccggccg gcacgccgac
     2281 cccggtcacc ttcgacaaca gcggcaagct gaccgcaccg acggacggca aggtcagcct
     2341 cggcaccttc acccccaaca ccggcgctgg ccagttgaac atgacgctgg atatcaccgg
     2401 ctcgacccag tacggcgaga agttcgccct gcgcaacacc cagcaggacg gctatgccgc
     2461 cggcaagctc aacgagatca ccgtgtcgga gaccggcgtg gtctacgccc gctactccaa
     2521 cggtgccgac aagccgctgg gccaggtcgc gctgaccacc ttcaacaacc cgcaggggct
     2581 ggagtcgaag ggcaacaacc tgtgggtgga taccttcagc tcgggcacgc cgcgtaccgg
     2641 catgccggac acctccaacc tcggcaagat ccaggccggc tcgctggaag cgtccaccgt
     2701 cgacctcacc gagcagctgg tcaacatgat caccgcgcag cgcaacttcc aggccaacgc
     2761 gcagatgatc accacccagg accagatcac ccagaccgtc atcaacatcc gttgatgagc
     2821 tgctgaccct gctacggaac tccccgcatg gataaagccc tttacgtggc gatgaccggt
     2881 gcccgcgcct ccctgcaggc gcagggtacg ctcagccaca acctcgccaa ctcggacacc
     2941 cccggcttca aggaagcgct ggccaacacc gaagccttcc cgatccgcgg cccgggcttt
     3001 gcctcgcggg tggatgcgct gcacgtcgac gccggcttca accgccggcc cggcgcgcag
     3061 cacatcaccg gcaagccgct ggaccttgca ctgcagaccg gcacctggct ggccgtgcag
     3121 tccagcgatg gcagcgaagc ctatacgcgc ggcgctgcac tgtcggtcac cccgaacggc
     3181 cagctggtga cctccagcgg ccgcccggtg ctggatgaca acaacaatcc gatcgccatt
     3241 ccgccctacc aggcgatgga gatcggcgcc gacggcacga tctcgatcat cccgcagggc
     3301 gaaggcccgc agaccatggc ccaggtcggc cggatcaagg tcgtgcaggc cccggacgag
     3361 cgcctcgagc gcggcctcga tggcctgttc cgcaacaccg atccgcagca gccgttcgca
     3421 cccgcgcagg gcaccgccgt gcacagcggc cagttggaag gcagcaacgt cgatgccgct
     3481 ggtgcactgg tgcagatgat ccagctgcag cgccagtacg aaatgcaggt gcaggtgatc
     3541 aagcacggcg acgacaacgc gcgcagcgcc aacagcctgc tgcgcctggg cagctgacgg
     3601 aattccggcg ccgcccgagc gcggcgctgg cacaccgctt gcagacccgc taccaagggc
     3661 cgcatcgcgc ggccggttcc accagacagg acaccgaaga tgaaccaggc attgtggatc
     3721 gcgaaaaccg gactggatgc gcagcagatg cgcatgtcgg tggtttccaa caacctcgcc
     3781 aacaccaaca ccaccggctt caagcaggac cgtgccagtt tcgaagacct gctgtaccag
     3841 caggtgcgcc agcccggcgg ttcctcgtcg gcgcagacgc agctgccgac cggcctgcag
     3901 ctgggtaccg gcgtgcgcgt ggtggccacc gccaagaact tcgaacaggg tggccagcag
     3961 cagaccggcc gcgccctgga cgtgatggtc aacggccgtg gtttcttcga ggtgcagatg
     4021 cccgacggca gctcggccta cacccgtgat ggctcgttca agatcaacca ggacagcgag
     4081 ctggtcacca acagcggcta tccggtgcag ccgggcatcc agattcccga aggcgcgcag
     4141 tcggtgacca tcggtaccga cggcaccatc agcgtgaaga tggccgacgg cgccgcctcg
     4201 gtggaagtgg gcgcgttgac cctgaccgac ttcgtcaatc cggccggcct gcaggcccgc
     4261 ggcgagaacc tgttcctgga gaccaccgcc tccggcccgg cacagaacgg caaccccggc
     4321 ctcaacggcc tgggcaccgt ggtgcagggc gcgctggaag gcagcaacgt caacgtggtg
     4381 gaagagctgg tgtcgatgat cgaaacccag cgcgcctacg aaatgaacgc caaggcgatc
     4441 tccaccaccg attcgatgct cggctatctc aacaacaagc tctgaccggc ccaaccggga
     4501 aaccgccatg tcgcccattt ccaccttcgc ccgcactgcc ctcgcctgcg ccgtggccgc
     4561 cctgctcggt ggctgcgtga tcgccggcga cgtgcgcccc tacgcggcga tggcgccgat
     4621 ccagccgatc atgccgccgc aggccgcgcc gaccgccggt gcgatctacg ctgccggccc
     4681 gaccctgcag ctgtattcgg accgtcgcgc acgcgacgtc ggcgacctgt tgaccatcac
     4741 cctgctggaa aacaccaccg cgcagaccag tgccaacacc gccaccaaca aggagtcgaa
     4801 cctcaacctg gggacgccct cgatcctcgg tgcgccggtc accctgggcg gcaaggacat
     4861 cctcagcgcg tcggccaccg gcaagcgtga tttcaccggc aagggcaaca gcgcgcagag
     4921 caaccggctg cagggcagcg tcacggtcac cgtggtgcag cgcctgccca acggcaacct
     4981 ggtcgtgcag gggcagaaga acctgcggct gaaccagggc gacgaactgg tgcaggtgca
     5041 gggcatcgtg cgccccggcg acatcagcca ggacaacacc atcccctcca gccgcgtggc
     5101 cgaagcccgc attgtctacg gcggacgcgg cccggtcgcg cagtccaacg cgatgggctg
     5161 gttgagccgc ttcttcaact ccggcctgac gccgttctga gtatggccat gaaagctctc
     5221 ttctcttcta cgtggcagcg acgcatcgcg tcgctctacg gatcattctt cctcctgctg
     5281 gcaatggctg cgccggccag cgccgagcgc atcaaggacc tggcccaggt cggtggcgtg
     5341 cgcggcaatg cgctggtggg ctacggcctg gtggtgggcc tggatggcag cggtgaccgc
     5401 accagccagg caccgttcac cgtgcagagc ctgaagaacc tgctcggcga gctgggcgtc
     5461 aatgtgccgc cgaacgtcaa cccgcagctg aagaacgtgg cggcggtggc gatccatgcc
     5521 gaactgccgc cgttcgccaa gccgggccag ccgatcgaca tcaccgtgtc ctcgatcggc
     5581 aatgcggtgt cgctgcgtgg cggctcgctg ctgatggctc cgctgcgcgg tgccgatggc
     5641 cagatctacg cgatcgccca gggcaacctg atcgtcggcg gcttcggtgc gcagggcaag
     5701 gacggttccc gcgtctcggt gaacgtgccc agcgtcggcc gcattcccaa cggcgccacc
     5761 gttgaacgtg ccctgcccga tccgctcgcc aatggcggcg acatcaccct gaacctgcac
     5821 aacaacgatt tcaccaccgt ctcgcgcatg gtcgctgcac tcaacaacgc cttcggcgag
     5881 ggcgcggcgc gtgccgtcga tggtgtaacc gtggcggtca ccgcacccac cgatcccggc
     5941 gcgcgcatcg gcctgctggc acgcatcgag aacctggagc tgaccccggg cagcgcgccg
     6001 gccaaggtgg tggtcaattc gcgcaccggc accgtggtca tcggccagca ggtacgggtc
     6061 ggcccggccg cgatctcgca tggttcgctg accgtgacga tccaggaaaa caccaacgtc
     6121 agccagccca acgccctgtc cggcggccgc accgtggcca gcccacagtc gaccatcacc
     6181 gccaccaacg acggcagccg catgttcaag ttcagcggcg gcaccaccct ggacgaaatc
     6241 gtgcacgcgg tgaacgccgt gggcgcggcg ccgggcgatc tcatcgcgat cctggaagcc
     6301 ctgaagcagg ccggcgcatt gagtgccgaa ctcgaggtga tctgacatgc gcatcaaccc
     6361 cgcattcgat ctgcacccgg cgcaacagaa cgatccggcc aagatcgaca aggtcgcgcg
     6421 ccagctggaa ggccagttcg cgcagatgct ggtcaagagc atgcgtgacg ccagcttcgg
     6481 cgactcgctg tttcccggcg agaacaagat gttccgcgac atgtacgacc agaagattgc
     6541 cgaggcgatg acacgcggca agggcctggg cctgtcgggc atgatcagcc gccagctgtc
     6601 cggccaggcc accgatggcc cggcactgga tacccgcgtg gacccggcca aggccagccg
     6661 cgcgtaccag ctgaacgcac cggccaggcc ggcaccgtcg ctgccattgg aagacggcag
     6721 ccaggccgtg cgcctgctgc agcagatggc ggccggcgca cagtcgggcg cacaggccgc
     6781 ggtggcaccg atggagcagg cactggacct gattgccggc cgcgagagca gcagcatgca
     6841 ccgcgcgctc ggcacagacg atccctacat cggcagcctg cagggcgatg actgggcggc
     6901 tggcagcgac cagtggtcgg ccactgccag caatcgcggt accgcgatca gcccggccga
     6961 tgccctggcc acccgcaccg ccgtggcgca actgggcgag cacaccccgg agggcttcgt
     7021 ggccagcatc tggcagcacg cgcagagcgc ggccaaggag ctcggcgtgg atgcccgcgc
     7081 cctggtcgcg caggccgcgc tggaaaccgg ctggggcaag cgccacatca agcatgccga
     7141 cggcagcacc tcgcacaacc tgttcggcat caaggccaat ggctggagcg gccagcgtgc
     7201 cgtggccggc acccatgagt atgtcgatgg cgtgcgccgc aacgagaccg ccagcttccg
     7261 tgcctacagt tcgccggccg aaagcttcgc cgactacgtg cgcctgttga agaccagccc
     7321 gcgctaccag caggcgctgc aggccggcac cgacgtacag ggcttcgcgc gtggcctgca
     7381 gcgtgccggc tatgccaccg acccacgcta cgccgccaag atcgccgcga tcgccggcgg
     7441 cccgaccatc gagcgcgccg tcagcgccgt ggccgacgcc ggcacgcgcc ttggccagac
     7501 cttcgccagc accgcaaccg cggcgctggg tatcactcgt cgttgaggaa ccccatgtcc
     7561 agcgtacttt ccaccggtac cggtgccctg ctcgccttcc agcgtgcgtt ggcgaccacc
     7621 agccacaacg tggccaacct caataccccg ggttacagcc ggcagaaggt caacttcgct
     7681 accgctgatc cgcagaacta cggctatggc acggtcggca acggcacccg catcaccgat
     7741 atccgccgca ccgccgacca gctggcgatc tcgcgcctgc tcgacagcag cggcgagctg
     7801 gcacgcctga agcagctttc cggcatggcc gaccgggtca actcgctgtt ctcggaaggc
     7861 gcgaccaaca ttgccggcgt ctggtcgaac ttcttcgact cggtcagcgg cctgtcctcc
     7921 aacgcctccg gcaccgccga ccggcagaac atgctcgacg gcggcaaggc cctggccaac
     7981 cgtttcgtgc agctcaacac gcacctgaac aacctcaacg gcgaggtcaa caacggcctg
     8041 ctggccggtg ccaccgaggt caaccgcctg gcgcaggaga tcgcgcagat caacggcgcc
     8101 atcggcacca acatcgccaa tgccgcgccg gacctgctcg atcgccgcga ccagctgatc
     8161 acccagctga tcggctatac cggcggcacg gcggtgatcc aggacggcgg catcatgaat
     8221 gtctacaccg ccggcggcaa cgcattggtg gtgggcacca cggcgaccaa ggtcaccacg
     8281 gtggccgacc cctaccagcc cgagcgcctg cagctggcgc tggagaccca gggcaacacg
     8341 atccggcttg acgcaaaggc cgtcggtggc cagatcggcg gcctgctgga attccgcgat
     8401 acggtgctga ccccggccca ggccgaactg ggcaagctgg ccgtcggcct ggccgagacc
     8461 ttcaaccaga cccatcacca gggtgtggac atgtatggcc agctgggcgg tgatttcttc
     8521 aacatcggca atccgcgcgt caccgccaac aatgccaaca ccggcacggc cagcctcagc
     8581 gccacctatg gcgacctggg caagctggac gcgcagaacg tggtgctgca gttcgatggc
     8641 acccagtgga aggccagccg cgccgacacc ggcgccaatg tgccgctgac cggtaccggc
     8701 accgccgccg atccgctggt gatcaatggc gtcaagctgg tggtcggcgg gaccccggct
     8761 gccaatgatc gattcctgct gcagcccacc gcaggcgtgg ccggcagcat ggaagtggcg
     8821 attaccgatc cctcgcgcat cgccgccgct gcggcggtga agggcgctgc cgccacgtcc
     8881 aacaccggca ccggcaagct gagcggggtc accgtcagcg attcgaccaa cgccaacctg
     8941 cgcaatccgg ctgcgatcgt gttcacctcg gccaccacct acaccatcga tggtggcccg
     9001 ccgcagacct acaccccggg ccagaccatc agcgccaatg gctggagctt cgtgctggac
     9061 ggtgcgccga aggtcggcga caccttcaac atcaccccta cccctgccgg ctcgtcggac
     9121 aacagcaatg cctcccggct ggccaaggtg gagagcgcca aggcgttcaa cagcggcacg
     9181 gtcaccctga acggtgcgct gggcggcctg accacccagg tcggcgctgc cgcacgttcg
     9241 gccgagtatt cgctggaagc gcagctggtg atcaacgaca aggcgcagga agcgcgcgac
     9301 gaagtgtccg gggtcaacct ggacgaggaa gcggccgaca tgctgcgcct gcagcaggcc
     9361 taccaggccg cctcgcagct gatttccacc gccgacagca tgttccagac catcctggga
     9421 gccgtccgcc gatgagcagc cgcatctcca ccagcatgat gttcaaccag tccgtgtcgc
     9481 tgatgatggc caagcaggcc aagctcagcc acctggagca gcagatcgcc accggcagca
     9541 agatcgtcag cgccaaggac gatccggtcg ccgccggtgc cgcagtcggt cttgaccgca
     9601 gcctggccgc gcttgaccgc atgaagctca atgccggcaa cgtgcagaac cggctgggcg
     9661 tgcaggaaaa caccctggcc caggtcaacg acctgatggc gcgcgtcaat gatctgacca
     9721 tccaggccag caacccggcg ctgagtgcac cggacaagaa gaccctgatc accgagctga
     9781 accagatccg cgatggcctg ctgtcactgg ccaacgccga cgatggtacc ggccgctacg
     9841 tgttcggcgg caccaacgac ggcgacccgc cgtttgccaa gatcaacggc aaggtggtct
     9901 accggggcga ccagacccag cgccagatcg aagtcggccc ggatacctac gtgcgcgatg
     9961 cgctgcccgg cagcgagatc ttcatgcgca tccccaccgg cgatggcttt gtcgatggcg
    10021 gcgcggcggc cggcaacacc ggcaacggcg tgctgaccaa catcacccgc gacggcagtg
    10081 acagctggaa cggacaggcc ttcagcatcc gcttcaccgc tgccgaccag taccaggtgc
    10141 tggacggcgc gggcaacgtc accggtaccg gcacctacaa ggccggtgac aacgtggaag
    10201 tgaacggggt gcgcctgcag atcaccggtg cacccgctgc gggtgacagc ttcaacgtca
    10261 cgcccgcgag cagccgcgac atcttcgaca ccatggacaa gctgatcgcc gcgctggatg
    10321 ccgacaccgg taccaccgcg aagatgtccg cgcagcagaa cgaactgcag agtgccctgc
    10381 gcgacgtggc acgcgcctcc gaacgcatga tcgattcacg tgccgcaggc ggcgcacagc
    10441 tgaaggcatt ggataacgcc gcggacatgc gcgaggccaa cggcgtgacc ctgaagacca
    10501 cgctctcgca gatgcgtgac ctggactatg ccgatgcatt gagccagtac cagctgcaga
    10561 gcaccgcgct gcaggcggca cagacgatct tctcgcagat gcagtcgatg tcgttgttca
    10621 acaagatccg ctgacgcttc cct
//
LOCUS       DAOKIP010000136        10640 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.136,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000136 DAOKIP010000000
VERSION     DAOKIP010000136.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 10640)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10640)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10640
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.136"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(51..1535)
                     /locus_tag="QEL58_002824"
     CDS             complement(51..1535)
                     /locus_tag="QEL58_002824"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012478719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDS1677274.1"
                     /translation="MSELQDLSALIRANTPLIVIETQDEGRIVELFRQTLMHVWRALH
                     RWSITEGLRRIDLDSEDPPVGPPDASAALQMIRQADQRGVYLLLDFHPYLGYASHQRA
                     LRDLIQRRHSEPHVLVLIGAKVELPAELEALAVRFNPRLPDANALLKMLREEADAYAR
                     EHGGRRVEVDSEAVKKILKNLQGLSLVDARRIARQLIYADGALRDDDLPQLARLKFEL
                     LNRSGHLFFEHDSARFGDVAGANRLKRWINQRRVAFIAGSAPAGLDPPRGMLLLGVQG
                     CGKSMLAKATAAGFGVPLLRLDVGALYNKYHGETEANLRQALASAEQLAPCVLWMDEI
                     EKGLATGGEDGGVSRRVLGYLLTWMAERKAPVFIVATANQVQELPAELLRKGRFDEIF
                     FVDLPTPDVRVELLRLHLGRRQLNADDFALPALAAAANGFSGAEIEQAIVAGLYAAHA
                     ESRPLDTELLMTEIRATRPLSVLMAEQVEALRAWASGRTVPADD"
     gene            1659..2288
                     /locus_tag="QEL58_002825"
     CDS             1659..2288
                     /locus_tag="QEL58_002825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005407538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HDS1677275.1"
                     /translation="MKTILVAGSKGGVGKTTVATHLAAYAALQGKATVIADADPQGSS
                     TRWAQRRAGLESAVLPIDVHRKKHWAQKLPDGTETVIIDAPAGALADDIPHFLDAADA
                     VVVPVLPSALDIEAIVGFLNSLAQNPRVHSRKLPVGLVLNRTKPWTQTSQQALQMLAE
                     WPYPVVAQLRDSQSYVVMTGLGRSLFDYRSAQVREHQADWEPLLSWLKL"
     gene            2338..2814
                     /locus_tag="QEL58_002826"
     CDS             2338..2814
                     /locus_tag="QEL58_002826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011035432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HDS1677276.1"
                     /translation="MRELILLRHAHAEPATPGQADLDRPLSPVGLAEAEAAGKWLKEN
                     NLLPDCVLCSPARRTRETLEAVLGTIGYVEKRLEDRIYEATPGTLAALVDDRRDLDRV
                     LIVGHNPGLERLVALMTEGSSSDYRGMPPAGIAVLGFPRESAIEPGVASLNAFWWP"
     gene            2819..3436
                     /locus_tag="QEL58_002827"
     CDS             2819..3436
                     /locus_tag="QEL58_002827"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005407540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YceI family protein"
                     /protein_id="HDS1677277.1"
                     /translation="MSLARRGRLLLPALLALGPAWAVVPPPTPLPPVAAEAPRMLRLD
                     TVRSQIGFEVRTRFGQRIEGVFPHFEGRIEILSDGRHQVHLKMFTRSVEIPGKARYTG
                     WMRGEEFFDAGRHPVVEFDSLPYWPETVENGGDIDGRLTLRGISHPEKLKVEKAECAR
                     PGYDCDVVSRGTVQRGRYGMDSWQLALSDRVTFVLRARLSEAPKP"
     gene            3433..5487
                     /locus_tag="QEL58_002828"
     CDS             3433..5487
                     /locus_tag="QEL58_002828"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017117881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase D family protein"
                     /protein_id="HDS1677278.1"
                     /translation="MNLLLRVLALATVLLGSGCASLSHAERDRAEAIAVQARSAVVDC
                     QRADRCAQDSPLRALAGRAFTESTPERPRHYATLLDEGEGALVARLNLLRSATRSIDL
                     QTYIFDKDDSARLVIDELLAASRRGVKVRVLIDQLSAISDLQILGALSGAHQNFQLRV
                     YNPTFGKARLNYFDYAGSVLCCFRRFNQRMHNKLLVIDDAIGVVGGRNYQDDYYDWDR
                     EYNFRDRDVLIAGPEARAMAANFDAFWRAHRSVPAERLNDVGRTLLREGVPILPPATF
                     RRPERVQRVSAEANDNEFVTRSFVDTALPVASVRYVADLPRKHRREQPDAPLAGQHVT
                     EPQLDALIASAQKEVILQTPYLVLSKPAQKLFRELRKRPQPPRVVVSSNSLAATDNPI
                     VYALSYKYKRRNMRELGFNIFEYKPFPLDAPVDYRNLLPDPITAPDGEDEGGRNPLLG
                     GSAAGSNAGGGSTGRTLPASKQQAVVNHPRTGSAYQNARERRRAAGSEVETRLLRTET
                     RPSFLGSKAVNKPLPVTRKGARMGLHAKSLVVDRRIGVVGTHNFDPRSENYNTEGAVI
                     IDDPVFAEQLAQSILRDTHPQNSWTVAPRAKPPVLSGLNYSVGKASEALPILDFWPWR
                     YATDYEFKPGPECPQPLPRQDPAFHTCYVAVGDFPEVNVGPKWLLVRMLTAFGAGLVP
                     IL"
     gene            5498..5932
                     /locus_tag="QEL58_002829"
     CDS             5498..5932
                     /locus_tag="QEL58_002829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004134292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hotdog fold thioesterase"
                     /protein_id="HDS1677279.1"
                     /translation="MAQVFREAVSLEQLNALSRSTAIESLGIVFSAAGEDWLQATMPV
                     DERTRQPYGILHGGASVVLAETLGSSAGNLCVDTGKQICVGLEINANHVRAVRSGTVI
                     GTARALHVGRSTQLWEIRIEDEQGRLVCISRLTLAVVAAGHG"
     gene            6053..6844
                     /locus_tag="QEL58_002830"
     CDS             6053..6844
                     /locus_tag="QEL58_002830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-acyl-sn-glycerol-3-phosphate acyltransferase"
                     /protein_id="HDS1677280.1"
                     /translation="MTSPTPAPRGGVARVCRYLYRVPLLLVHIIVFLPLILIGMLPPW
                     GELRMGDATFGAKVVNWWQGGLMWIFGFRLAQIGQPLPGAVLFVANHVSWVDICILHS
                     QRMMGFVAKREIASWPLVGWLAARGQTIFHQRGNTESLGGVMQVMADRLREGKAVGVF
                     PEGRTRGGHEVGPFHARIFQAAVETGVPVQPVALVYGVKGDAQTIVAFGPGESFFANF
                     LRLLGEPARRAEVHFLAPIGAQDLEGRRRIAETSRARIVAAMSTG"
     gene            6852..7886
                     /locus_tag="QEL58_002831"
     CDS             6852..7886
                     /locus_tag="QEL58_002831"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HDS1677281.1"
                     /translation="MALIPPPVLDAGTPTLHAADYQPPRWLRNPHLQSMLSSSRMRLQ
                     RGLLLLAATGAVSEELILDGGDGVRLQGWHSHVEGREPKGMALLLHGWEGSAESSYMR
                     MAAARMLEQGFDVVRLNFRDHGNTHHLNRGIFHSNLIDEVVHAAGDIAQRWPQLPLVA
                     AGYSLGGNFVLRLALRAPAAGVPLQRVASVCPVLDPALTMESIENGPAMYDWYFRRKW
                     AGSLRRKRDLFPELSDCDDRVLKLDIRALTAWLVERHTSFGSLQAYFDGYSIAGDRLS
                     TLQVPADILMAQDDPVIPYTTFNDWQLPRQAHLETACWGGHCGFIENWRGDGFSERWV
                     AQRLQRVLQA"
     gene            7943..10012
                     /locus_tag="QEL58_002832"
     CDS             7943..10012
                     /locus_tag="QEL58_002832"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019237114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HDS1677282.1"
                     /translation="MQDQIIQALRQNQADQAVQLAQAWTRDEPGLADAHRWLALALQQ
                     QGNAEAAMEALQQALRLAPDDAQLHLQHAGLLLALRQFEGADEALLRTTGLDPNAFSA
                     YLMQAHLAIGRNDFDEAQRLSTLAGRVEPEHPELLTIDGMVALRRGDADRALALLSAA
                     SKALPDDTRVLYALGFAYLGKDMLAFAEQSFRRVLELNPSLSSLHGLVVQLALRQGNV
                     PAAAEAAQVALQQPELDVPAMRRLAGELALRNSQPLQALDHLLPLLDIQPEDRQVLQL
                     LLMSWQRLGREDEARARLDAVLEAHDQLHDVWLARLAIEQVGSASAVAAVERWMAAMP
                     AHLPALEARLRLHDMVGERAQAEAIAERIVSLEPGRVSGETRLVEGLLQRDPAAAVAR
                     VQALIEQAPEAHRADLRTWLGEIQDRAGQPQEALRTWMSLQAEQAPQRLPLPPQAKAP
                     PSWPDKGSIDGDASSAPIFLWGAPGSGVERVATGLAAASPVLRSDRYTNTPPDDAFQN
                     FNTLQDLASGVLTPERLVQRWREQLPARGLQSDTVIDWLLWWDNALLWALRPQLPQGR
                     LLLVLRDPRDMLLDWVAYGAAAPLAMTSLAEASEWLTRALTQVATLHEEDLYPHVLLR
                     IDQIGNDPHAMAELLGRLFERPMPPAAQLGAPRLPPGHWRNYRDVMSAAFAQLTPVAV
                     RLGYPEE"
     gene            10023..10634
                     /locus_tag="QEL58_002833"
     CDS             10023..10634
                     /locus_tag="QEL58_002833"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014645487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbhB/YbcL family Raf kinase inhibitor-like
                     protein"
                     /protein_id="HDS1677283.1"
                     /translation="MQLSSNSLTHGAPIDRAFAAGDANGFAPDRNPHLAWSGAPAGTR
                     SFLLVCVDPDVPTVPETVGRSDMSVPRDQPRCDFVHWVMADIPATVQEIAAGSCSDGF
                     VVKGKPAPAGPDGSRQGLNDFTGWFAGNPDMAGDYLGYDGPYPPFNDERVHRYFFRVF
                     ALDVASLELPARFTAADAYRAMHGHVLAEAALHGTYTLNPALG"
BASE COUNT         1633 a         3727 c         3644 g         1636 t
ORIGIN      
        1 tgttcacggc caacccgcca cgaggggcag cgccgttcgc gggaaacccc tcagtcgtcc
       61 gcgggcaccg tccgccctga cgcccacgcc cgcagcgcct ccacctgttc ggccatcagc
      121 accgacagcg gccgcgtggc acggatctcg gtcatcagca gctcggtgtc gagcggccgg
      181 ctttccgcat gtgctgcata caggccggcc acgatcgcct gttcgatctc ggcaccggaa
      241 aaaccgttcg ccgctgcggc cagcgccggc agtgcgaagt catcggcgtt gagctggcgc
      301 cggcccaggt gcagccgcag cagttccacg cggacgtccg gggtgggcag gtcgacgaag
      361 aagatctcgt cgaagcggcc cttgcgcagc agttcggccg gcagttcctg tacctggttg
      421 gcggtggcga cgatgaacac cggcgccttg cgctcggcca tccaggtcag caggtaaccg
      481 agcacgcggc gcgacacgcc gccgtcctcg ccaccggttg ccagcccctt ctcgatctcg
      541 tccatccaca gcacgcacgg tgccagctgt tcggccgagg ccagcgcctg gcgcaggttg
      601 gcctcggtct cgccgtggta cttgttgtac agcgcgccca cgtccaggcg cagcagcggc
      661 acgccgaaac cggcggcggt ggccttggcc agcatcgact tcccgcagcc ctgcacgccc
      721 agcagcagca tgccgcgcgg cgggtccagc ccggccggtg ccgagccggc gatgaacgcc
      781 acccgccgct ggttgatcca gcgcttgagc cggttggccc cggccacgtc gccgaagcgc
      841 gcgctgtcat gctcgaagaa caggtgcccg ctgcggttga gcagctcgaa cttcagccgt
      901 gccagctgcg gcaggtcgtc gtcgcgcagc gcgccgtcgg cgtagatcag ctggcgcgcg
      961 atgcgccggg catccaccag gctcaggccc tgcaggttct tcaggatctt cttcaccgct
     1021 tcgctgtcga cttccacgcg gcgtccgccg tgctcgcgcg cataggcgtc ggcctcctcg
     1081 cgcagcatct tcaacagcgc gttggcatcg ggcaggcgcg ggttgaagcg caccgccagc
     1141 gcttccagct cggccggcag ttctaccttg gcaccgatca gcaccagcac gtgcggctcg
     1201 ctgtggcggc gctggatcag gtcgcgcagc gcgcgctggt ggctggcata gcccaggtag
     1261 gggtggaaat cgagcagcag gtagaccccg cgctgatccg cctggcggat catctgcagg
     1321 gctgcgctgg catcgggggg accgaccggc gggtcttcgc tgtccaggtc gatgcggcgc
     1381 aggccctcgg tgatcgacca gcggtgcagc gcccgccaca cgtgcatcag cgtctgccgg
     1441 aacagctcga cgatgcggcc ctcgtcctgg gtttcgatca cgatcagggg ggtattggcg
     1501 cggatcagtg cgctcaggtc ctgcagctcg ctcatgccgg ttcgatcctt cgggggcgcc
     1561 acgatagcaa aggcaggcgg cgcaggttca gcgcggcgct acctcccgtc accaccgccg
     1621 gtgtacgctc ggggcacgta cccggaagcg aggctggcat gaagacgatc ctggtggccg
     1681 gttccaaggg cggggtgggc aagaccaccg tcgccaccca cctggccgcg tacgcggcat
     1741 tgcagggcaa ggccacggtg atcgccgatg ccgacccgca gggctccagc acccgctggg
     1801 cgcaacggcg tgccgggctg gaaagcgcgg tgcttcccat cgacgtgcat cgcaagaagc
     1861 actgggcgca gaagctgccc gacggcaccg aaaccgtcat catcgatgcg cctgcggggg
     1921 cattggccga cgatatcccc catttccttg acgctgccga cgcggtggtg gtgccggtgc
     1981 tgccttcggc gctggacatc gaggccatcg tcggtttcct caacagcctg gcccagaacc
     2041 cgcgggtgca cagccgcaag ctgccggtcg gcctggtcct gaaccgtacc aagccctgga
     2101 cccagacttc gcagcaggcc ctgcagatgc tggccgaatg gccctacccg gtggtcgcgc
     2161 agctgcgtga cagccagagc tacgtggtca tgaccggcct cggccgcagc ctgttcgact
     2221 accgctcggc ccaggtgcgc gaacaccagg ccgattggga gcccctgctg tcgtggctga
     2281 aactttgata tcggcgtcac ttttcctgat gcatcctctt cttcatggaa acccgcgatg
     2341 cgtgaactga tcctgctgcg ccatgcccat gccgaaccgg ccacccccgg ccaggccgac
     2401 ctcgaccggc cgctgtcgcc ggtggggctg gccgaagccg aagccgccgg caagtggctg
     2461 aaggaaaaca acctgctgcc ggactgcgtg ctgtgctcgc cggcgcggcg cacccgcgag
     2521 accctggaag ccgtcctcgg caccatcggc tacgtcgaga agcgcctgga agaccgcatc
     2581 tacgaagcga cccccggcac cctggcggct ctggtggatg atcgccgtga cctcgaccgg
     2641 gtgctgatcg tcggccacaa cccgggcctg gagcgcctgg tggcattgat gacggagggc
     2701 agcagcagcg actaccgcgg catgccgccg gccggcatcg ccgtgctcgg cttcccgcgt
     2761 gagtctgcga ttgaaccggg cgtggccagc ctgaacgcgt tctggtggcc gtgatccgat
     2821 gagcctggcg cggcgcggcc gcttgctgct gcccgcgctg ctggcactgg gcccggcctg
     2881 ggccgtggtg ccgccgccga ccccgttgcc gccggtggcg gccgaagccc cgcgcatgct
     2941 gcgcctggat accgtccgct cgcagatcgg tttcgaggtg cgcacccggt tcgggcaacg
     3001 catcgaaggc gtgttcccgc acttcgaggg ccgcatcgag atcctttccg atggccggca
     3061 ccaggtgcac ctgaagatgt tcacgcgctc ggtcgagatc ccgggcaagg cgcgctatac
     3121 cggctggatg cggggcgagg aattcttcga tgccggccgt catccggtgg tcgagttcga
     3181 ctcgctgccg tactggccgg agaccgtgga aaacgggggc gacattgatg gccgcctgac
     3241 cctgcgcggg atcagccacc cggagaaact gaaggtcgag aaggcggagt gcgcccgacc
     3301 cggctatgat tgcgacgtcg tcagccgcgg taccgtgcag cgaggccggt atggcatgga
     3361 cagctggcag cttgccttga gtgaccgagt gaccttcgta ttgcgtgcgc gcctgagcga
     3421 ggcgccgaaa ccgtgaacct cctgctgcgt gtactggcgc tggcaaccgt gttgctgggc
     3481 agcggttgtg catcgctctc gcatgccgag cgcgaccgtg ccgaagcgat cgccgtgcag
     3541 gcgcgctcgg ccgtggtcga ttgccagcgt gccgaccgct gcgctcagga ctcgccgctg
     3601 cgggcactgg ccggccgcgc gttcaccgaa tccaccccgg agcggccgcg gcattacgcg
     3661 accctgctgg atgaaggcga aggtgccctg gtggcgcgcc tgaacctgct gcgcagcgcc
     3721 acccgcagca tcgaccttca gacctacatc ttcgacaagg acgacagcgc ccggctggtc
     3781 atcgacgagc tgctggccgc atcgcgccgc ggggtgaagg tgcgggtgct gatcgaccag
     3841 ctctcggcga tctccgacct gcagatcctc ggtgcgttgt ccggtgcgca ccagaacttc
     3901 cagctgcggg tctacaaccc gacgttcggc aaggcccggc tgaactactt cgactacgcc
     3961 ggcagcgtgc tgtgctgctt ccgccgtttc aaccagcgca tgcacaacaa gctgctggtg
     4021 atcgacgatg cgatcggcgt ggtcggcggc cgcaactacc aggacgacta ttacgactgg
     4081 gaccgcgagt acaacttccg cgaccgcgac gtgctgatcg ccggcccgga agcacgtgcg
     4141 atggcggcca acttcgatgc gttctggcgc gcccaccgca gtgtgccggc cgaacgcctg
     4201 aacgacgtcg gccgcaccct gctgcgcgag ggcgtgccga tcctgccgcc ggccactttc
     4261 cgccgcccgg aacgggtgca gcgggtcagc gccgaggcca acgacaacga gttcgtcacc
     4321 cgttccttcg tcgataccgc gctgccggtg gcctcggtgc gctacgtggc cgacctgccg
     4381 cgcaagcacc gccgcgagca gcccgacgcg ccgctggccg gccagcacgt gaccgaaccg
     4441 cagctggatg cactgattgc cagcgcgcag aaggaagtga tcctgcagac gccctacctg
     4501 gtgctgtcaa agccggcgca gaaactgttc cgcgagctgc gcaagcgccc gcaacccccg
     4561 cgcgtggtgg tgtccagcaa cagcctggcg gccaccgaca acccgatcgt gtatgcgctg
     4621 tcgtacaagt acaagcggcg caacatgcgc gaactgggct tcaacatctt cgaatacaag
     4681 ccgttcccgc tggatgcgcc ggtcgactac cgcaacctgc tgcccgaccc gatcaccgca
     4741 cccgacggcg aggacgaggg cgggcgcaat ccgttgctcg gtggcagtgc cgccggcagc
     4801 aacgctgggg ggggcagcac cgggcgcacg ctaccggcca gcaagcagca ggccgtggtg
     4861 aaccacccgc gcaccggcag cgcctaccag aatgcgcggg aacgccgccg cgccgccggc
     4921 agcgaagtgg agacgcgcct gctgcgtacc gagacgcggc cgtcgttcct cggcagcaag
     4981 gcggtcaaca agccgctgcc ggtcacccgc aagggcgcgc gcatgggcct gcatgcgaag
     5041 tcgctggtgg tcgaccgccg catcggggtg gtcggcaccc acaacttcga tccgcgcagc
     5101 gagaactaca acaccgaagg cgcggtgatc atcgatgacc cggtgtttgc cgagcagctg
     5161 gcccagagca tcctgcgcga tacccatccg cagaactcct ggacggtggc gccacgggcc
     5221 aagccgccgg tgctgtcggg cctgaactac agcgtcggca aggcgtccga agcgctgccg
     5281 atcctcgatt tctggccctg gcgctatgcc accgactacg aattcaagcc cggcccggag
     5341 tgtccgcagc cgctgccacg gcaggatccg gcgttccaca cctgctacgt tgccgtcggc
     5401 gacttccctg aagtcaacgt cggccccaag tggctgctgg tgcgcatgct gaccgcattc
     5461 ggcgccggcc tcgttcccat cctctgaagg tacccgcatg gcccaggtat tccgcgaagc
     5521 cgtttccctc gagcagctca acgcgctcag ccgcagcacg gcgattgaat ccctgggcat
     5581 cgtcttcagc gccgctggcg aggactggct gcaggcgacc atgccggtgg acgaacgcac
     5641 ccgccagccc tacggcatcc tgcacggcgg cgcctcggtg gtgctggccg agaccctggg
     5701 cagcagcgcc ggcaacctgt gcgtggatac cggcaagcag atctgcgtcg gcctggaaat
     5761 caacgccaac cacgtgcgcg cggtgcgctc gggcacggtc atcggcaccg cccgtgcact
     5821 gcacgtgggc cgcagcaccc agctgtggga gatccgcatc gaggacgagc agggccgcct
     5881 ggtgtgcatc tcgcggctga ccctggcggt ggtggccgcc ggccacggct gagcccctgg
     5941 caggcgcgtt gacggccgcg gaacccagcg ttccccgccg attgccccgg tcgatcggtg
     6001 ttatggccta aatcggctgg cagcgatgac ggccctccgg tatcgtgcgc agatgacttc
     6061 ccccactccg gccccccgtg gcggcgtggc gcgtgtgtgc cgttacctgt accgcgtacc
     6121 gctgctgttg gtccacatca tcgtgttcct gccgctcatc ctgatcggca tgctgccgcc
     6181 atggggcgaa ctgcgcatgg gcgacgccac gttcggtgcc aaggtggtca actggtggca
     6241 gggcgggctg atgtggatct tcggcttccg cctggcgcag atcggccagc cgctgcccgg
     6301 tgcggtgctg ttcgtcgcca accacgtcag ctgggtcgat atctgcatcc tgcacagcca
     6361 gcgcatgatg ggcttcgtcg ccaagcgcga gatcgccagc tggccgctgg tcggttggtt
     6421 ggccgcacgt ggccagacca tcttccacca gcgcggcaac accgaatcgc tcggtggggt
     6481 gatgcaggtg atggccgatc gcctgcgcga aggcaaggcg gtgggcgtgt tcccggaagg
     6541 acgcacccgc ggcggccacg aagtggggcc gttccatgcc cgcatcttcc aggccgcggt
     6601 cgagaccggc gtgccggtgc agccggtggc actggtctac ggcgtgaagg gcgacgcaca
     6661 gaccatcgtc gcgttcggcc ccggcgagag cttcttcgcc aatttcctgc gcctgctcgg
     6721 tgagccggcg cgacgtgcgg aagtgcactt cctggcaccg atcggtgcgc aggacctgga
     6781 aggccgtcgg cgcatcgcgg agacttcgcg cgcgcgcatc gtggcggcca tgagcaccgg
     6841 gtgagcgcac ggtggccctg atcccgccac cagtactgga cgccggcacg ccgacgctgc
     6901 acgcggctga ctaccagccg ccgcgctggc tgcgcaatcc gcacctgcag tcgatgctca
     6961 gctccagccg catgcgcctg cagcgcggcc tgctgttgct ggcggccacg ggtgcggtca
     7021 gcgaggaact gattctcgac ggtggcgacg gagtgcgcct gcagggctgg cacagccatg
     7081 tcgaaggccg cgaacccaaa ggcatggcgt tgctgctgca cggctgggaa ggcagtgccg
     7141 aatccagcta catgcgcatg gccgccgcgc gcatgctgga acagggcttc gacgtggtgc
     7201 ggctgaactt ccgcgaccat ggcaacaccc atcatctcaa ccgcggcatc ttccactcca
     7261 acctgatcga tgaagtggtg catgctgcgg gcgatatcgc ccagcgctgg ccgcagctgc
     7321 cgctggtggc cgccggctac tcgctgggtg gcaacttcgt gctgcgcctg gccctgcgcg
     7381 cgccggccgc cggcgtgccg ctgcagcgcg tggcctcggt ctgcccggtg ctggacccgg
     7441 cactgaccat ggaaagcatc gagaacggcc cggcgatgta cgactggtac ttccgccgca
     7501 agtgggccgg ttcgctgcgc cgcaagcgcg acctgttccc cgagctgagc gactgcgacg
     7561 accgcgtgct gaagctggac atccgcgcac tgaccgcctg gctggtcgag cgccacacca
     7621 gcttcggctc gctgcaggcg tacttcgacg gctactcgat tgccggcgac cgcctgtcca
     7681 cgctgcaggt gccggccgat atcctgatgg cgcaggatga tccggtcatt ccgtatacga
     7741 ccttcaatga ctggcagctg ccgcgccagg cgcacctgga aaccgcctgc tggggcggcc
     7801 actgcggctt catcgagaac tggcggggcg atggcttctc cgagcgctgg gtcgcgcaac
     7861 gcctgcagcg ggtcctgcag gcctgaaccg gcagcggcac gcagcccgct acaatgccgg
     7921 tttgcacttg aagcggactg ccatgcaaga ccagatcatc caagcgttgc gccagaacca
     7981 ggccgaccag gccgtgcagc tggcccaggc gtggacccgt gacgaacccg gcctggccga
     8041 tgcccaccgc tggctggcgc ttgcgctgca gcagcagggc aacgccgaag ccgcgatgga
     8101 ggcattgcag caggcgctgc ggctggcccc ggacgacgcc cagctgcacc tgcagcacgc
     8161 cggcctgctg ctggcactgc gccagttcga aggcgccgac gaggcgctgc tgcgtaccac
     8221 tggcctcgat ccgaacgcct tctccgccta cctgatgcag gcgcacctgg cgatcggccg
     8281 caacgacttc gacgaagccc agcgcctgtc gaccctggcc gggcgcgtgg aaccggagca
     8341 tccggaacta ctgaccatcg acggcatggt cgcgctgcgc cgtggcgatg ccgaccgcgc
     8401 gctggcactg ctgtcggccg ccagcaaggc gctgccggac gatacccgcg tgctgtacgc
     8461 actgggcttc gcctatctgg gcaaggacat gctggcattc gccgagcagt cgttccgccg
     8521 cgtgctggaa ctgaacccgt cactgtcctc gttgcacggc ctggtggtgc agctggcgct
     8581 gcgccagggc aacgtgccgg ctgcggccga agccgcgcag gtcgccctgc agcagccgga
     8641 gctggacgtg ccggcgatgc gtcgcctggc cggcgaactg gcgctgcgca acagccagcc
     8701 gctgcaggcg ctggaccatc tgctgccgtt gctggacatc cagccggaag accgccaggt
     8761 gctgcagctg ctgctgatgt cgtggcagcg cctgggccgc gaggatgaag cgcgcgcacg
     8821 cctggatgca gtgctggaag cccatgacca gctgcacgac gtgtggctgg cgcggctggc
     8881 catcgagcag gtgggcagcg caagcgcagt ggccgccgtc gagcgctgga tggcggcgat
     8941 gccggcgcat ctgccggcgc tggaagcgcg cctgcgcctg cacgacatgg tgggcgagcg
     9001 cgcgcaggcc gaagcgatcg ccgagcgcat cgtcagcctg gaaccgggcc gcgtcagcgg
     9061 cgaaacccgg ttggtcgaag ggctgctgca gcgcgacccg gccgccgcgg tcgcgcgcgt
     9121 gcaggcgctg atcgagcagg caccggaggc ccaccgtgcc gacctgcgga cctggctggg
     9181 cgagatccag gatcgcgccg ggcagccgca ggaagcgctg cgcacctgga tgtcgctgca
     9241 ggccgagcag gcgccgcagc gcttgccgct gccgccgcag gccaaggcac cgccgagctg
     9301 gccggacaag ggcagcatcg atggcgatgc cagttccgca ccgatcttcc tgtggggcgc
     9361 gcccggctcg ggcgtggagc gcgtggcgac cggcctggcc gccgccagcc cggtgctgcg
     9421 cagcgaccgt tacaccaaca cgccacctga tgacgccttc cagaacttca acacgctgca
     9481 ggacctggcg tcgggtgtgc tgacgccgga gcggctggtg cagcgctggc gcgaacagct
     9541 gccggcgcgt ggcctgcaga gcgacaccgt gatcgactgg ctgctgtggt gggacaacgc
     9601 cctgctgtgg gcgctgcgcc cgcagttgcc ccaggggcgc ctgctgctgg tgctgcgtga
     9661 tccgcgcgac atgctgctgg actgggtggc ctacggtgcc gctgcaccgc tggcgatgac
     9721 ctcgctggcc gaagccagcg agtggctgac gcgcgcactg acccaggtcg ccacgctgca
     9781 cgaggaagac ctgtatccgc acgtgctgct gcgcatcgac cagatcggca acgacccgca
     9841 tgcgatggcc gaactgctgg gccgcctgtt cgagcggccg atgccgccgg ctgcgcagct
     9901 gggcgctccg cgcctgccgc cgggccactg gcgcaactac cgcgacgtga tgagcgccgc
     9961 cttcgcccag ctcaccccgg ttgcggtgcg cctgggttac ccggaagagt gaggagagtg
    10021 caatgcagct gagcagcaac agcctgaccc acggcgcgcc gatcgaccgc gcgttcgccg
    10081 ccggcgacgc caacggcttc gccccggacc gcaacccgca cctggcctgg agcggggcgc
    10141 cggccggcac ccgttcgttc ctgctggtgt gcgtcgaccc ggacgtgccg accgtgccgg
    10201 agacggtcgg ccgcagcgac atgagcgtgc cgcgtgacca gccgcgctgt gatttcgtgc
    10261 actgggtgat ggccgatatc ccggccacgg tgcaggagat tgccgccggc agctgcagcg
    10321 acgggttcgt ggtgaagggc aagcccgcgc cggccggccc ggacggcagc cgccagggcc
    10381 tgaatgactt caccggctgg tttgccggca atccggacat ggccggtgat tacctgggct
    10441 acgacggtcc ctatccgccc ttcaacgacg agcgcgtgca ccgctacttc ttccgtgtgt
    10501 tcgcgctgga cgtggcctcg ctggagctgc cggcacgctt caccgccgcc gacgcgtatc
    10561 gggccatgca cggtcacgtg ctggccgaag cggcactgca cggaacctac acgctgaacc
    10621 cggcgctggg ctgaggctgt
//
LOCUS       DAOKIP010000137        10550 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.137,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000137 DAOKIP010000000
VERSION     DAOKIP010000137.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 10550)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10550)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10550
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.137"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(131..910)
                     /locus_tag="QEL58_002834"
     CDS             complement(131..910)
                     /locus_tag="QEL58_002834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005421062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HDS1677284.1"
                     /translation="MSRLLRRLISPAPPATVQRDTVRLRLEDAEIEVLRVRDPRARRI
                     KLSVDERGARLTLPPRASLVMGERFLEQHRDWLALQLRQYQGHGLPAPLQPGEDGVLP
                     LRGELLPLRWQEGRYARLEIDEHGACVQWPSRGGDATLRRLLREFYEAQTRADVGRWL
                     PKYLPTLPRAPSRLRLKVMSSQWGSLAPDGSMALDLALVLGRSDAFEYVLVHELCHLI
                     QPNHSPAFWHEVEQRFPAWREQRDYFQLEGRRLKAMLRQLL"
     gene            complement(970..1875)
                     /locus_tag="QEL58_002835"
     CDS             complement(970..1875)
                     /locus_tag="QEL58_002835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017154674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination-associated protein RdgC"
                     /protein_id="HDS1677285.1"
                     /translation="MFFRNLTFFRFPTATDFSEVDTLLPHALLKPVGALEMNSRGFIS
                     PFGREEKELLSHRIAEHLWLTVGGEDKILPAAVVNDLLERKLEEIEEKEGRRPGGRER
                     KRMKDDLLHELLPRAFVKSSRNDAFIDLQHGYVAVDTSSRKTGEYFMSDIRGLLGSFP
                     AMPLNAEVAPRSILTGWIAGEPLPTGLSLGEECEMKDPVEGGAVVKCQHQELRCDEID
                     KHLDAGKQVTKLALIFEDNLSFVIGDDLIVRKLKFLDGALDQLEHADEDGRRAEFDAR
                     FALQSAEIRRLFLLLEEAFKLSKAD"
     gene            complement(1912..2832)
                     /gene="ttcA"
                     /locus_tag="QEL58_002836"
     CDS             complement(1912..2832)
                     /gene="ttcA"
                     /locus_tag="QEL58_002836"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014645455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiocytidine(32) synthetase TtcA"
                     /protein_id="HDS1677286.1"
                     /translation="MSAVISLPDPPPRAARDPRVAEREQHKLAKRLRRQVGEAIADFG
                     MIEAGDKVMVCLSGGKDSYTLLDVLLQLQKKAPVPFELVAVNLDQKQPDFPEHVLPEY
                     LAGLGVPYHIIEQDTYSVVSRVIPEGKTMCSLCSRLRRGALYNYAETHGFTKIALGHH
                     RDDMVATFFMNLFHHAKLSGMPPKLRSDDGRHVVIRPLAYVRESDIVEYAQARQFPII
                     PCNLCGSQENLQRRQVGLMLRQWEKDHPGRIEQIARAMGEVRPSQLADTTLFDFMALG
                     RRDDAPLPDAHAWLAGSPADADADPETPTV"
     gene            2924..3127
                     /locus_tag="QEL58_002837"
     CDS             2924..3127
                     /locus_tag="QEL58_002837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012509637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcH family protein"
                     /protein_id="HDS1677287.1"
                     /translation="MDTYSPAEIVEHLAALRAEHRLLDEQITRMAANGEDELESKRLK
                     RRKLQLKDCIARLESLQIPDEPA"
     gene            complement(3246..5882)
                     /gene="plsB"
                     /locus_tag="QEL58_002838"
     CDS             complement(3246..5882)
                     /gene="plsB"
                     /locus_tag="QEL58_002838"
                     /EC_number="2.3.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014035464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate 1-O-acyltransferase PlsB"
                     /protein_id="HDS1677288.1"
                     /translation="MAPMSKQNPLPFPGEESPSTPADTVPASPSTGTGPNPVPPPAHA
                     RSAGRRPLWARLLGRLVEPWLSLKIEPEDPGQYNDGRPVMYVLEDYGLSNALILDKAC
                     RQAGLPSPLVPLAGDPTGRKRAYLALSRRSSSNSLIPEQRGAKTHSDSLAKVLQAHRV
                     RDDLDVHLVPVSIFVGRAPDKQSGWFAVLFSENWALVGRFRRLLAVLLNGRSTIVRFA
                     PPISLRSTVDEGLEPERTVRKLQRVLRTHFRRIRESVIGPDLSTRRLLVDQVLAAEPV
                     REAIAAQAKRDNSKPADAWKKAHAYAWEIAADYSSPVVRSASFMLSHVWNRIYAGVLV
                     HHLDKFKAAAPGHEVVYVPSHRSHMDYLLLSYLLYDRGIVPPHIVAGINLNLPVVGTL
                     LRKGGAFFIRRSIRGNALYSAVLSEYVAQLVAGGYSLEYFVEGGRSRTGRLLQPKGGM
                     ISMTLRAFLRQPRKPVLFQPIYIGYEKLMEGGSYLDELSGRPKEKESIWSLLWGIPKV
                     LKQNYGQVVVNFGEPIALNDVLAEKAPEWKGEAVSEDEKPAWLSTTVDTLAERIQVRI
                     NGAADVNPINLLALALLSTPKHAMGEADLIAQIELCKTLLVEMPYSDRVTVTPHSPER
                     IIAHAEEINVLTRIKHPLGDVLSVSGDTAVLLSYFRNNVVHLFTASSWVACCFQNNRR
                     MSRTGLVQLGRTVYPFLQAELFLPWSEDEFAQRIDRTIDVFVREGLLQNVNDDDGGIL
                     ARNTGQTDEVFRLRAIGHSLQQAFERYYIAISVLVKNGPGVLGAAELESLCQQAAQRL
                     SLLYAPAAPEFFDKSLFRGFIQKLRELRLVWPDENSKLLFDERLDAWAKDAKFILGRE
                     LRHTIERVSPEAARPDEAAPQD"
     gene            complement(5882..6835)
                     /locus_tag="QEL58_002839"
     CDS             complement(5882..6835)
                     /locus_tag="QEL58_002839"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019338155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677289.1"
                     /translation="MSVAVRGRSARGWGLAAMLLLAVAACRESGNAPVKPAAEPVAAV
                     QAMALRLAEDDLVGYARLSVPPSQYQRLQQAWTEGHSQWPLTELPLGDQLLPMLAALR
                     KPNASTELQRSFDRQLAGQAGAVRQAAQSMGNFGVQYLRHQKGYTPGQQAHYIALVET
                     LAVWAQGAPISDRARARSTIAALVGAAGKVGFDDEAGLQAAGMEGSLQQLAPFIHTLK
                     AVLGSYGLGVDEALRSVRGELLSVEGDNALVRLHYDLAGREMSLQLPLSRREGHWYLT
                     RTLADTDALLRKADAARADAAPAPAEVPAEGGEAATPPPKP"
     gene            complement(7116..7937)
                     /locus_tag="QEL58_002840"
     CDS             complement(7116..7937)
                     /locus_tag="QEL58_002840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014035462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine protease"
                     /protein_id="HDS1677290.1"
                     /translation="MYRSTSLFIGLLLAASAAPVIAAPQAREVPRIIGGEAAQPGEYP
                     FMVSIQGVFDGDSDHDRHFCGGTLISPSWVLTAAHCLQSENPTGLAVLAGQATLSTEA
                     ASRASNVKAIHVHPAFNSGNSLEHDVALIQLSAPLSDAQPVALRLRPDASYLKPGREF
                     TVIGWGDTDIGDGRVYPTQLQTVQVPFVPFNECQQAYGGELSSGKVICAGREGIDSCQ
                     GDSGGPLLLRLREGWTQFGVVSWGEGCAQAGYPGVYARIAEKHAVDFIEAVWQRD"
     gene            complement(8157..8882)
                     /gene="pyrF"
                     /locus_tag="QEL58_002841"
     CDS             complement(8157..8882)
                     /gene="pyrF"
                     /locus_tag="QEL58_002841"
                     /EC_number="4.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004153432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orotidine-5'-phosphate decarboxylase"
                     /protein_id="HDS1677291.1"
                     /translation="MSRAPLPLRDDERLIFALDVPDRVQALEWVDRLGDSVAFYKIGM
                     ELLASGEYFQVLDELARRDKRVFVDLKFFDIPATAAAVIKRLSQWPVSYATIHGWHPA
                     MMEACAAANSSDMRLLAVTVLTSMGRPDLAQMGIDREPVDVVVERALAAQAAGIDGVI
                     ASGQEAAPIRAATGAGFSIVCPGIRPGGPVGDDQKRTVGVAQAFADGADAIVVGRPIR
                     LAADPQAAARAIQQEIASALAAR"
     gene            complement(8879..9802)
                     /locus_tag="QEL58_002842"
     CDS             complement(8879..9802)
                     /locus_tag="QEL58_002842"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012509633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-nucleotidase, lipoprotein e(P4) family"
                     /protein_id="HDS1677292.1"
                     /translation="MRRPVSLSLTLLATAALGLSACKRVDAPAAEATAPEAPAAAAKA
                     EGALDATANDNLNAVLWMQRAQEYKAITEQTYRAAADHLDAALKEAHWDALVPEERGN
                     EAKGLKPAVVLDVDETVLDNSPYQARLVRDGKEYDELTWDQWVAEKKAKAIPGVVDFA
                     KAANAKGVTLLYVSNRAVHLKDATLANLREQGLPVADDSVFLGLGTVVPGCEQNGSEK
                     NCRRRLAGQQYRVLMQFGDQLGDFVEVTANTNDGRDALLQQYHDWFGERWWMLPNPTY
                     GGFEPAQFNNDYSQSRQARHDAKRAALDYAP"
     gene            9903..>10550
                     /locus_tag="QEL58_002843"
     CDS             9903..>10550
                     /locus_tag="QEL58_002843"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012478689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF480 domain-containing protein"
                     /protein_id="HDS1677293.1"
                     /translation="MTDSAQTPDVPLLDAVQARLLGCLVEKEATTPDTYPLTVNAAQS
                     AANQKTAREPVMNVDAGSVQHALRQLETMGLARQHFSSRADRYEHRLQAALDLTRQQT
                     VLLALLLLRGPQTLGELVTRSERLHRFADTDEARHAIERLQQRALLVVLPRASGQRED
                     RYMHLLCGEVDGAALAAKYASSGGGSEATDPGLAERVAQLEAAVAELQAQLAELRG"
BASE COUNT         1656 a         3594 c         3593 g         1707 t
ORIGIN      
        1 cgccgccaac gtcgcttgcg acggcccgaa gggtgccggt caggacgacc ggcatcgcca
       61 tgctcggctg ctcttcaacg tgatgactgg aaccccgcgc tgcgcgcgtt agccgtgcat
      121 cggctcggct ctacaacagc tggcgtagca tcgccttcag gcgtcgccct tccagttgga
      181 aatagtcgcg ctgttcgcgc caggcgggga agcgctgttc cacttcatgc cagaacgcgg
      241 gcgagtggtt cggctggatc aggtggcaga gttcgtgcac cagcacgtac tcgaacgcgt
      301 cggatcggcc cagcaccagc gcaaggtcca gcgccatgct gccgtccggc gccagcgagc
      361 cccactgcga ggacatcacc ttcaaccgca ggcggctggg tgcgcgtggc agggtgggca
      421 ggtacttcgg cagccagcgg ccgacgtcgg cgcgggtctg tgcttcgtag aactcgcgca
      481 gcaggcggcg cagggtggca tcgccgccac ggctcggcca ttgcacgcag gcgccgtgct
      541 cgtcgatctc caggcgcgca tagcgacctt cctgccagcg cagcggcaac agttcgccgc
      601 gcaacggcag cacaccgtct tcgccgggct gcagcggcgc cggcaggccg tgcccctggt
      661 actggcgcag ctgcagcgcc agccagtcgc ggtgctgttc caggaagcgt tcgcccatca
      721 ccaggcttgc ccgcggcggc agggtcaggc gcgcgccgcg ctcgtccacg ctcagtttga
      781 tgcgccgcgc acgcgggtcg cgcacgcgca gcacctcgat ctcggcatcc tccaggcgca
      841 ggcggacagt gtcacgctgc acggtggcgg gcggagcggg ggagatcagg cggcgcaaca
      901 ggcggctcat ggcgccagca tagcgccgct tcgggccgct ggatgaccgg cggcccacgc
      961 agtgcctgtt cagtcagcct tgctgagctt gaaggcttct tccagcaaca ggaacaggcg
     1021 gcggatctcg gcgctctgca gggcgaagcg ggcgtcgaat tcggcgcggc ggccgtcttc
     1081 gtcggcatgc tccagctggt ccagggcgcc atcgaggaac ttcagcttgc gcacgatcag
     1141 gtcgtcgccg atcacgaagg acaggttgtc ttcgaagatc agcgccagct tggtcacctg
     1201 cttgccggcg tccaggtgct tgtcgatctc gtcgcagcgc agttcctggt gttggcactt
     1261 gaccaccgca ccgccctcca ccgggtcctt catctcgcac tcttcgccca ggctcagccc
     1321 ggtcggcagc ggctcgccgg caatccagcc ggtcaggatc gagcgcggcg cgacttcggc
     1381 attcagcggc atcgccggga agctgccgag caggccgcgg atgtcggaca tgaagtattc
     1441 gccggtcttg cggctggatg tatccaccgc gacataaccg tgctgcaggt cgatgaaggc
     1501 gtcattgcgc gaagacttca caaaggcgcg cggcagcagc tcatgcagca ggtcgtcctt
     1561 catgcgcttg cgctcgcggc cgcccgggcg acggccttcc ttttcctcga tctcctccag
     1621 cttgcgctcg agcaggtcgt tgaccaccgc cgccggcagg atcttgtcct caccgcccac
     1681 ggtcagccac agatgttcgg cgatgcggtg ggagagcagt tccttctcct cgcggccgaa
     1741 cggcgagatg aagccgcgcg aattcatttc cagcgcgcca accggcttca gcagggcgtg
     1801 cggcagcagg gtgtcgactt cggaaaaatc ggtggcggtc gggaaacgga agaacgtcag
     1861 gttgcgaaag aacatggaat tccggatggc aaagaggaag ggcgaccgac cttaaacggt
     1921 gggcgtctcg ggatctgcgt cggcgtcggc cggggagccg gccagccagg catgggcgtc
     1981 gggcagcggc gcgtcgtcgc gacggcccag cgccatgaag tcgaacaggg tggtatcggc
     2041 cagctgcgag ggccgcactt cgcccatggc acgcgcgatc tgctcgatgc ggcccgggtg
     2101 gtccttctcc cactgcctga gcatcaggcc gacctggcgg cgctgcaggt tctcctggct
     2161 gccgcacagg ttgcagggaa tgatcgggaa ctggcgcgcc tgcgcgtact cgacgatgtc
     2221 gctctcgcgc acgtacgcca gcggccggat caccacgtgc ctgccgtcat cgctgcgcag
     2281 cttcggcggc atgcccgaca gcttggcgtg gtggaacagg ttcatgaaga acgtggccac
     2341 catgtcgtcg cggtgatggc ccagcgcgat cttggtgaag ccgtgggtct cggcgtagtt
     2401 gtacagcgcg ccacgacgca ggcgcgagca cagcgaacac atggtcttgc cttccggaat
     2461 gacccggctg accaccgaat aggtgtcctg ctcgatgatg tggtacggca cgcccagccc
     2521 ggccaggtac tccggcagca cgtgctcggg gaagtccggc tgcttctggt ccaggttcac
     2581 cgccaccagc tcgaacggca ccggcgcctt cttctgcagc tgcagcagca cgtccagcag
     2641 ggtgtagctg tccttgccac cggacaggca gaccatgacc ttgtcgccgg cctcgatcat
     2701 gccgaagtcg gcaatcgcct cgcccacctg ccggcgcagg cgcttggcca gcttgtgctg
     2761 ctcgcgctcg gccacgcgcg gatcgcgggc ggcgcggggc gggggatcgg gaagggagat
     2821 cacggcactc atggtctcca ttctaacggc tcggagccgc cgcggccggg ccgaggggct
     2881 cccctctccc ggcagtcatc atcgctgtgt atgctcggag gctgtggaca catacagccc
     2941 cgccgagatc gtcgagcacc tcgccgccct gcgcgccgag caccgcctgc tggatgaaca
     3001 gatcacccgc atggccgcca acggcgagga cgagctggag tccaagcgcc tgaagcgtcg
     3061 caagctgcag ctgaaggact gcatcgccag gctggaaagc ctgcagattc ccgacgaacc
     3121 ggcctgacgc cgggttcggg taggggccaa ccctggttgg cctgctgctc tggtgggtgc
     3181 caaccttggt tggcacgact ggaatgtgtg tggaccaagg tccacaccca ccacaaggat
     3241 tcagttcaat cctgcggcgc agcctcgtcc gggcgtgccg cttccgggct gacccgctcg
     3301 atggtgtggc gcagctcgcg gccgaggatg aacttggcat ccttggccca ggcatccagg
     3361 cgttcgtcga acagcagctt gctgttctcg tccggccaca ccagccgcag ttcgcgcagc
     3421 ttctggatga agccgcggaa cagggacttg tcgaagaact ccggtgccgc cggtgcatac
     3481 agcaggctca gccgctgcgc cgcctgctgg cacaggcttt ccagctcggc cgcgccaagg
     3541 acgccggggc cgttcttcac cagcaccgaa atggcgatgt agtagcgctc gaacgcctgc
     3601 tgcagcgaat ggccgatcgc acgcaggcgg aacacctcgt cggtctgccc ggtgttgcgc
     3661 gccaggatgc cgccgtcgtc atcgttgacg ttctgcagca ggccttcgcg cacgaacaca
     3721 tcgatggtcc ggtcgatacg ctgggcgaac tcgtcctcgc tccacggcag gaacagctcg
     3781 gcctgcagga acgggtacac cgtgcggccc agctggacca gcccggtacg gctcatgcgg
     3841 cggttgttct ggaagcagca ggccacccac gaggaggcgg tgaacaggtg caccacgttg
     3901 ttgcggaagt agctcagcag caccgcggta tcgccgctga cgctgagcac atcgcccagc
     3961 gggtgcttga tgcgggtgag gacgttgatt tcctcggcgt gggcgatgat ccgctccggc
     4021 gagtgcggag tcaccgtcac ccggtccgaa tacggcatct cgaccagcag cgtcttgcac
     4081 agttcgatct gcgcgatcag gtcggcctcg cccatcgcat gcttgggcgt ggacagcagg
     4141 gccagcgcca gcaggttgat cgggttgacg tcggcggcac cgttgatgcg cacctggatg
     4201 cgttcggcca gcgtgtccac cgtggtcgac agccaggccg gcttctcgtc ctcggagacc
     4261 gcctcgcctt tccactccgg cgccttctcg gccagcacgt cgttcagcgc gatcggctcg
     4321 ccgaagttca ccaccacctg accatagttc tgcttgagca ccttggggat gccccacagc
     4381 agcgaccaga tcgattcctt ttccttcggc cggccggaca gttcgtccag gtagctgccg
     4441 ccttccatca gtttctcgta gccgatgtag atgggctgga acagcaccgg cttgcgcggc
     4501 tggcgcagga acgcgcgcag cgtcatcgag atcatgccgc ccttgggctg cagcaggcga
     4561 ccggtacgcg agcggccgcc ttcgacgaag tattccagcg agtagccacc ggccaccagc
     4621 tgcgcgacgt actcactgag taccgccgag tacagcgcgt tgccacggat cgagcggcgg
     4681 atgaagaacg cgccgccctt gcgcagcagg gtgccgacca ccggcaggtt caggttgatg
     4741 ccggccacga tgtgcggcgg cacgatgcca cggtcgtaca gcaggtagga cagcagcagg
     4801 tagtccatgt ggctgcggtg gctgggcacg tacaccactt cgtggcccgg cgcggccgcc
     4861 ttgaacttgt ccaggtgatg caccagcacg cccgcataga tgcggttcca cacgtggctg
     4921 agcatgaagc tggccgagcg caccaccggg ctggaatagt ccgcggcgat ttcccaggcg
     4981 taggcgtgcg ccttcttcca ggcatcggcc ggcttcgaat tgtcgcgctt ggcctgcgcg
     5041 gcgatcgcct cgcgcaccgg ttcggccgcc agcacctggt cgaccagcag gcgccgcgtc
     5101 gacaggtcgg ggccgatcac cgattcacgg atgcggcgga aatgggtgcg cagcacgcgc
     5161 tgcagcttgc gcaccgtgcg ctccggctcc aggccttcgt ccacggtgct gcgcagcgag
     5221 atcggcgggg cgaagcggac gatggtgctg cggccgttga gcagcaccgc cagcaggcgg
     5281 cggaagcggc cgaccagtgc ccagttttcc gagaacagca cggcgaacca gccgctctgc
     5341 ttgtccggcg cgcggccgac gaagatcgac accggcacca ggtgcacgtc caggtcatcg
     5401 cgcacgcgat gtgcctgcag caccttggcc agcgaatcgg agtgggtctt ggcgccacgc
     5461 tgctcgggga tcagcgaatt gctggagctg cgtcgcgaca gcgccaggta ggcgcgcttg
     5521 cggccggtcg ggtcaccggc cagcggcacc agcggcgacg gcagcccggc ctggcggcag
     5581 gccttgtcca ggatcagcgc attcgacagg ccgtagtctt ccagcacata catgaccggg
     5641 cggccatcgt tgtactggcc ggggtcttcc ggttcgatct tcagcgacag ccacggctcg
     5701 accaggcgac cgaggaggcg cgcccacagc gggcggcggc cggccgaacg cgcgtgcgcg
     5761 ggcggcggta ccgggttcgg gccggtaccg gtcgaggggg acgccggcac cgtatcggcg
     5821 ggcgtcgacg gggattcttc gccggggaac ggcagcgggt tctgtttcga catcggcgcc
     5881 attatggctt aggcggtggc gttgccgctt ccccgccctc ggcgggtact tcggccgggg
     5941 ccggcgccgc gtcggcacgg gccgcgtcgg ccttgcgcaa cagcgcgtcg gtgtcggcca
     6001 gggtgcgggt caggtaccag tggccctcgc gccggctcag cggcagctgc aggctcatct
     6061 cgcggcccgc caggtcgtag tgcaggcgca ccagcgcgtt gtcaccttcc accgacagca
     6121 gttcgcctcg cacactgcgc agggcttcat ccacacccag cccgtagctg cccagcacgg
     6181 ccttgagggt atggatgaac ggtgccagct gctgcaggct gccttccatg cccgcggcct
     6241 gcaggccggc ctcgtcatcg aagccgacct tgccggcggc gccgaccagc gcggcgatgg
     6301 tgctgcgcgc acgggcgcgg tcgctgatcg gtgcgccctg tgcccagacc gccagggtct
     6361 cgaccagggc gatgtagtgc gcctgctgac cgggggtgta gcccttctgg tggcgcaggt
     6421 actgcacgcc gaagttgccc atcgactgtg cggcctgccg caccgcaccg gcctggccgg
     6481 ccagctggcg gtcgaagctg cgctgcagtt cggtgctggc attgggcttg cgcagggcgg
     6541 ccagcatcgg cagcagctgg tcacccaacg gcagctcggt cagcggccac tggctgtggc
     6601 cctcggtcca ggcctgctgc aggcgctggt actggctggg cggcaccgac agcctggcgt
     6661 aaccgaccag atcgtcttcg gccagccgca acgccatcgc ctgcaccgca gccaccggct
     6721 cggccgccgg cttgaccggg gcgttgccag actcgcggca cgccgccacg gccagcagca
     6781 gcatggccgc cagcccccat ccacgcgcag accttcctcg caccgccacg ctcatgcatt
     6841 cggactcccc ggaccggtcc gcatcttgcg gcctgcgacg tgacagcggc aagccgggcc
     6901 gtcacggttt ccgccaacgg cgatacaagt gattgaaaac cataaaaaaa gagccgggat
     6961 cacggggatc acaggctctt caagccggca cggggccgga ggacagtgtt gtggcacatg
     7021 tccggtccag ggaccggatg gcggcgatcc tacgctgccc tgcaagttaa ggcaacactt
     7081 cacgtaatac gatatatcta tttgatttta ttgaatcaat cacgctgcca gacagcctca
     7141 atgaaatcta cggcgtgttt ttcggcgatt cgggcataaa cgccgggata gccggcctgc
     7201 gcgcagccct cgccccagct gaccacgccg aactgggtcc agccctcgcg cagtcgcagc
     7261 agcagcggac cgccggaatc gccctggcag ctgtcgatgc cctcgcggcc ggcacagatc
     7321 accttgccgc tcgacagctc accgccgtag gcctgctggc attcgttgaa cggtacgaac
     7381 ggcacctgca ccgtctgcag ctgggtggga tagacacggc catcgccgat gtcggtgtcg
     7441 ccccagccga tcacggtgaa ctcgcgtcct ggcttgagat agctcgcatc gggccgcagc
     7501 cgcagggcga ccggctgcgc atcggacagc ggcgcgctga gctggatcag ggcgacgtcg
     7561 tgctccagcg aattgccgct gttgaatgcc gggtggacgt ggatcgcctt gacgttggag
     7621 gcgcgcgacg cggcctcggt ggagagcgtg gcctggccgg ccagcaccgc caggccggtc
     7681 ggattctcgc tctgcaggca atgcgcggcg gtcagtaccc acgacggtga aatgagcgtt
     7741 ccgccgcaga aatggcggtc atggtccgag tcgccgtcga agacgccctg gatgctgacc
     7801 atgaacgggt attcgcccgg ttgggcggct tcgccgccga tgatgcgcgg tacctcacgc
     7861 gcctgcggtg cggcgatgac gggtgcggcg gacgcggcca gcagcaggcc gatgaacaaa
     7921 gaggtgctgc gatacatgtt ccctgtactc ctctatcgat ggttggaacc ggcgcggccg
     7981 cggtccgtgc cggtgcatcg attgggaagc agtgatggcg tccacagggc gaacgcgcgc
     8041 acagtttcca cgcctagcgc tgtctgcgtc agtggcggcc gcacaaatgc gaacgccatc
     8101 gcgcacgggt cgcgatggcg ttcatggtgc cggcgtgacc ggcgttctcc gctggctcag
     8161 cgcgcagcca gagccgacgc gatttcctgc tggatcgccc gcgccgcggc ctgcggatcc
     8221 gctgccaggc ggatcggacg gccgaccacg atcgcatcgg cgccatcggc gaaggcctgg
     8281 gccacgccca cggtgcgctt ctggtcatcg ccgaccgggc cgccgggtcg gatgcccggg
     8341 cagacgatcg aaaatccagc gccggtggcg gcacggatcg gggccgcttc ctggcccgag
     8401 gcgatcacgc catcgatgcc cgccgcctgc gccgccagcg cgcgctcgac caccacgtcc
     8461 accggctcgc ggtcgatgcc catctgcgcc aggtccgggc ggcccatcga agtcagcacg
     8521 gtcaccgcca gcaggcgcat gtcgctgctg ttggcggccg cgcaggcctc catcattgcc
     8581 ggatgccagc catggatggt cgcgtagctg accggccact gcgacaaccg cttgatcacc
     8641 gccgcagcgg tggccgggat gtcgaagaac ttcaggtcga cgaacacgcg cttgtcgcgt
     8701 cgtgccagct cgtcgagcac ctggaagtac tcgccggagg ccagcagctc catgccgatc
     8761 ttgtagaacg ccacgctgtc gccgaggcga tccacccact ccagtgcctg cacgcggtcg
     8821 ggcacgtcca gcgcgaagat caggcgctcg tcatcgcgca gcggcagcgg cgcgcggctc
     8881 acggtgcgta gtccagcgcg gcgcgcttgg cgtcgtggcg ggcctggcgc gactggctgt
     8941 agtcattgtt gaactgcgcc ggctcgaagc cgccgtaggt cgggttcggc agcatccacc
     9001 aacgctcgcc gaaccagtcg tggtactgct gcagcagcgc gtcacggccg tcgttggtgt
     9061 tggcggtcac ttccacgaag tcacccagct ggtcgccgaa ctgcatcagc acgcggtact
     9121 gctgcccggc caggcggcgg cggcagttct tctcgctgcc gttctgctcg caacccggca
     9181 ccacggtgcc caggccgagg aacacgctgt cgtcggccac cggcaggccc tgctcgcgca
     9241 ggttggccag ggtcgcgtcc ttcaggtgca cggcgcggtt ggagacgtac agcagggtca
     9301 cgcccttggc gttggcggcc ttggcgaaat cgaccacgcc gggaatggcc ttggccttct
     9361 tctcggccac ccactggtcc caggtcagct cgtcgtactc cttgccgtcg cgcaccaggc
     9421 gcgcctggta gggcgagttg tccagcacgg tctcatccac gtccagtacc acggccggct
     9481 tcaggccctt ggcctcgttg ccgcgctcct ccggcaccag tgcgtcccag tgggcttcct
     9541 tcagcgctgc gtccaggtgg tcggcggcgg cacggtaggt ctgctcggtg atcgctttgt
     9601 attcctgcgc gcgctgcatc cacagcacgg cattgagatt gtcgttggcg gtggcatcaa
     9661 gcgcaccctc cgccttggca gcggcggccg gggcctccgg ggcagtggct tcggcggcag
     9721 gcgcatccac gcgcttgcag gcagacaggc ccagcgccgc ggtggcgagc agggtcaggg
     9781 acagggaaac gggacgacgc atgggttcac cggcaatcag atattccggc gcattttacc
     9841 ggcaaagccg ccgccgggac ggctatgctt ggcggttgac ccgttgccct tccggaggcg
     9901 ccatgaccga ttccgcccag acccccgacg ttcccctgct cgacgccgtg caggcccgcc
     9961 tgctgggctg cctggtggaa aaggaggcga ccaccccgga cacctacccg ctgacggtca
    10021 atgccgcgca gtcggcggcc aaccagaaga ccgcccgcga gccggtgatg aacgtcgacg
    10081 ccggcagcgt gcagcacgcc ctgcgccagc tggagacgat gggcctggcc cgccagcact
    10141 tctcctcacg ggctgaccgc tacgagcacc gcctccaggc cgcgctggac ctgacccggc
    10201 agcagaccgt gctgctggcg ttgttgctgc tgcgtgggcc gcagacgctg ggcgagctgg
    10261 tgacgcgcag cgaacgcctg caccgcttcg ccgacaccga cgaagcccgc cacgccatcg
    10321 agcgcctgca gcagcgcgcg ctgctggtag tgctgccgcg tgccagcggc cagcgcgaag
    10381 accgctacat gcacctgctg tgtggcgagg tggacggcgc ggcgctggcg gccaagtacg
    10441 ccagcagcgg cggtggcagc gaggccaccg acccgggcct ggccgagcgc gtggcccagc
    10501 tggaagcggc cgtggccgaa ctgcaggcgc agctggccga actgcgcggc
//
LOCUS       DAOKIP010000138        10543 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.138,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000138 DAOKIP010000000
VERSION     DAOKIP010000138.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 10543)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10543)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10543
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.138"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            143..1558
                     /locus_tag="QEL58_002844"
     CDS             143..1558
                     /locus_tag="QEL58_002844"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HDS1677294.1"
                     /translation="MAARKSSAPLIEVTARPGQPLGMAPAVFLRDFWQKRPLLIRNAF
                     PDFQTPVQPEDLAGLACEEGVLARLIEHDKAQDGWRVRTGPFQEDIFPALPDHDWTLL
                     VQDVDKWDKDVRALIEHFSFLPRWRMDDVMISFAATGGSVGAHVDQYDVFLLQAHGHR
                     RWQIDASESIKGKQPPLGFRPDVELKLLKVFKPTHDWVLAPGDMLYLPPNVPHHGVAE
                     DPCLTFSFGMRAPSSAELISDYLDTLIADADENIRYQDADLKVPADPNEIDTVAMARV
                     ITALNAIRMNDPDKLGDWFGRFITTYRAAGEVMAHQAAPAAEEVVQALASGLLLQRHP
                     WARLAWRRAKRGASLYVSGQDFALPVKDAQRLAGAEQLDAAAYRGLSDKGRAVLQRLL
                     VGGVFQLIDPNELYDAEDEDDGEDSVVLGEVVEGRDRVDAIDDDAVSDDVHTVTVHDD
                     GIEVIVNFEDHDEDDSDDGRA"
     gene            1568..2464
                     /locus_tag="QEL58_002845"
     CDS             1568..2464
                     /locus_tag="QEL58_002845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDS1677295.1"
                     /translation="MIRVQPVSHADAHVAIHDVRQRVFVQEQGIAAELERDALDPVSA
                     HVLALDADDRPVGTGRLAPDGRIGRMAVLASHRSHGVGEALLLALVEAGRRLGLAELH
                     LHAQLPARAFYARQGFLPEGDVFEEAGIGHQQMRRRLGAASAIDSRAEAVDITTAIVH
                     RARRQLWLHSRQLDPGLLDTPPVQAALRRFVTARHDKQLRVIVHDAAAIASAGAPLLA
                     LAQRLPSVIQIREVSDPIDRALASACMLNDAGDFYFRLIGHRLDGEAGIALPARSQPF
                     EQQLQRVWDRSRDCSELRALGL"
     gene            2651..5482
                     /locus_tag="QEL58_002846"
     CDS             2651..5482
                     /locus_tag="QEL58_002846"
                     /EC_number="1.2.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014507330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase E1 component"
                     /protein_id="HDS1677296.1"
                     /translation="MDNQLKQFAQSSQLAGGNASYVEDLYEQYLVSPDSVDPKWKTYF
                     DGFKGREAGDIPHSAVISHIADAAKDALKAGTGNGAGDERERNVGRLITAYRSRGHLD
                     ARLDPLGLTTPVNTPDLGLPFHSLSDGDLNSEFSTGGVGGQPRMKLRDLLARLKATYT
                     GSIGAEFMHISEVEQRQWIYKKLEAAGGNYQLDADTQRRTLERLTAAEGLERYLHTKY
                     VGQKRFSLEGGDSLIPMMDTIIRSAGKDGVKDVVIGMAHRGRLNVLVNTLGKNPRKLF
                     DEFEGKFEHDEHASAGDVKYHMGFSADVATDGGPVHLALAFNPSHLEIADPVVAGSVR
                     SRQERRKDTARKQVMPILIHGDAAFSGQGVVMELFQMSQARGFAVGGTVHIVVNNQVG
                     FTTSNPLDTRSTRYATDVAKMIAAPVLHVNGDDPEAVVFAAQLAFEFRQTFAKDVVID
                     LMCYRRWGHNEADEPAITQPLMYQVIRKHATTREMYAEQLEKAGVIAAGAGKAMVDAY
                     REKLDAGEVTTELAKVEKTPPSSPLFVDWPKLLEGKLSDPVSTKVEKNKLVELAKLIN
                     TVPDEVQLHSRVAKVYDDRRKMAAGEIPGDWGFAENLAYATLLDEGHALRLVGQDVGR
                     GTFTHRHAILHDQKTDNYYMPLRQLVDSPEKATVIDSLLSEEAVMAYEYGFSTTDPNT
                     LCIWEGQFGDFANGAQVVIDQFIAAGEAKWGRISGLTLLLPHGYEGQGPEHSSARLER
                     FLQLCALENMLVVVPSTPAQAFHMLRRQLHLTTRKPLVVMSPKSLLRHKLAVSTLDEL
                     ANGEFQHLIGDANADAKKVKRVVLCSGKVYYDLLEDQTKRGQDDVAIIRVEQLYPFPR
                     ALLAAELKKYGKATDVVWTQEEPQNQGAWYQIRHHLQFCLADGQNLHYAGRARSASPA
                     AGHMADHVREQQQLVADALVNPFNDTFAE"
     gene            5523..6725
                     /gene="sucB"
                     /locus_tag="QEL58_002847"
     CDS             5523..6725
                     /gene="sucB"
                     /locus_tag="QEL58_002847"
                     /EC_number="2.3.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008572000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyllysine-residue succinyltransferase"
                     /protein_id="HDS1677297.1"
                     /translation="MATEVKAPVLPESVADGTIATWHKKVGDAVKRDENLLDLETDKV
                     VLEVPSPVDGVLKEIKFAEGSTVTSSQVVAIIEEGAVAAAPAPAAEAAPAAAAAPAAA
                     APAAAAAPAPAAKSAADALPPGARFTAITEGVNPADVDGTGRRGAVTKEDIVNFARNG
                     GAGKAGGARPEERVPMTRIRKRIAERLMESKNSTAMLTTFNEVDLSKVSAARKELQDE
                     FVKAHGIKLGFMSFFVKAAANALQRFPLVNASIDGDDIIYHGYSDISIAVSTEKGLVT
                     PVLRNVERMSFADIEKTIADYAKKARDGKLSLEELQGGTFTVTNGGTFGSLLSTPIIN
                     PPQSAILGMHAIKERPIAQNGQVVIAPMMYLALSYDHRIIDGKDSVQFLVDIKNQLEN
                     PGRMLFGL"
     gene            6789..8225
                     /gene="lpdA"
                     /locus_tag="QEL58_002848"
     CDS             6789..8225
                     /gene="lpdA"
                     /locus_tag="QEL58_002848"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005988423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HDS1677298.1"
                     /translation="MAEQFDVVVIGAGPAGYHAAIRAAQLGLKTACIDAALGKDGKPA
                     LGGTCLRVGCIPSKALLDSSRQFWNMGHIFGDHGISFKDAKIDVEAMVGRKDKIVKQF
                     TGGIGMLFKANKVAAYYGFGELQPGNVVKVTQHDGSIVELKGTNVIIAAGSDSIELPF
                     AKFDGETIVDNVGGLDFTEVPNRLAVIGAGVIGLELGSVWKRLGAEVTILEALPEFLA
                     VADAEVAKTAAKEFKKQGLDIRLGAKVSKTEITGKGKKKEVVVTYTDSEGEKTLTVDK
                     LLVAVGRRAATKGLLAEGTGVKINERGQIEVDAHCHTGVNGVWAVGDCVRGPMLAHKG
                     FEEGIAVAELIAGLPGHVNFDTIPWVIYTEPELAWVGKTEAQLKAEGIPYKAGSFPFA
                     ANGRAVAMIEPAGFVKILAHAETDRILGMHLVGANVSELVHEGVLTMEFSGSADDLAR
                     ICHAHPSLSEVIHDAAMAVSKRAIHKAN"
     gene            complement(8298..9170)
                     /locus_tag="QEL58_002849"
     CDS             complement(8298..9170)
                     /locus_tag="QEL58_002849"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDS1677299.1"
                     /translation="MMNLAHWRLLVAVADEGTISRGADRVGISQSGASQALAQLEAAL
                     GFAVFVRERRQVEITALGRRVIEHARSMLGGLQAIRALADDSRGVSGVRIRLASFPSI
                     ISGVLPPLLRDFRRRHPGIEVVTVEGTDVEVEHWLASGMVDVGVVMNPAADRDPLALG
                     SDEWMAVLPQAHPLGRRATGGGVALSELAGEPFILATGGCTVNGQRLMSDAGLEMADV
                     RVTVRDWASACVLVREGLGVSLVPESTLPGDRHGLRVMPLRPLIQRVFGLVSSDAGKA
                     SRATRLLLDELRGQ"
     gene            9290..9892
                     /gene="gstA"
                     /locus_tag="QEL58_002850"
     CDS             9290..9892
                     /gene="gstA"
                     /locus_tag="QEL58_002850"
                     /EC_number="2.5.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione transferase GstA"
                     /protein_id="HDS1677300.1"
                     /translation="MKLYYAPYTCSLSPHIVLRELGLPFELVKVDNATRQTADGRDFR
                     TINRKGYVAALELDDGQVLTEGPVIVQFLADLKPECALAPPVGSWERVRLQEWLNFVT
                     SEIHAGSAPLFNAALPEEAKAFFRAKLFKRFDLLQEILAQQDFLMGSTFSVVDAYLFT
                     VLGWCRFFSIDLAAWPALPAYTRRVNARPAVQAALRAEAA"
     gene            complement(9955..10206)
                     /locus_tag="QEL58_002851"
     CDS             complement(9955..10206)
                     /locus_tag="QEL58_002851"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677301.1"
                     /translation="MRALLLAALALVALPALATPAVPPSSAWLERQQTAAADEADAAA
                     AATPKARERCRVVKEWKAGGTVVQHRICDDPPKKPAGKV"
     gene            complement(10203..10415)
                     /locus_tag="QEL58_002852"
     CDS             complement(10203..10415)
                     /locus_tag="QEL58_002852"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677302.1"
                     /translation="MKTLFALGVWCLLFVLCWPLAILALIAWPFVWLLSLPFRLVGIT
                     FSALFAFLRALFMLPARLLGGGPVAA"
BASE COUNT         1916 a         3673 c         3364 g         1590 t
ORIGIN      
        1 accccgccac gaggggctcc gccgttggcc ggaacccccg cgacaaaccc gcgcacgtgc
       61 gcaatcccag cgaacggcgg acaatggagg cctcaggcgg cccgccgtgc cgccatcccg
      121 tgttccgctg caaggattcc ccatggccgc ccgcaagtcc tccgctccgc tcatcgaagt
      181 caccgcacgc cccggccagc cgctgggcat ggccccggcc gtcttccttc gcgatttctg
      241 gcagaagcgc ccgctgctga tccgcaatgc cttcccggat ttccagaccc cggtgcaacc
      301 ggaagacctg gcgggcctgg cctgcgagga aggcgtgctg gcgcgcctga tcgaacatga
      361 caaggcccag gatggctggc gcgtgcgcac tggcccgttc caggaagaca tcttccccgc
      421 cctgcccgac cacgactgga ccctgctggt gcaggacgtg gacaagtggg acaaggacgt
      481 gcgcgcgctg atcgagcatt tcagcttcct gccgcgctgg cgcatggatg acgtgatgat
      541 cagcttcgcc gccaccggtg gctcggtcgg cgcccacgtc gaccagtacg acgtgttcct
      601 gctgcaggcc catggccatc gccgctggca gatcgacgcc agcgaatcga tcaagggcaa
      661 gcagccgccg ctgggcttcc gcccggacgt ggaactgaag ctgctgaagg tgttcaagcc
      721 gacccacgac tgggtgctgg cgccgggcga catgctgtac ctgccgccga acgtgccgca
      781 ccacggcgtg gctgaagacc cctgcctgac cttctcgttc ggcatgcgcg cgccgtcctc
      841 ggccgagctg atcagcgact acctggatac cctgatcgcc gatgccgacg agaacatccg
      901 ctaccaggac gccgacctga aggtgccggc cgacccgaac gagatcgaca cggtggcgat
      961 ggcccgggtg atcaccgccc tcaatgcgat ccgcatgaac gacccggaca agctgggcga
     1021 ctggttcggc cgcttcatca ccacctaccg cgccgccggc gaagtgatgg cccaccaggc
     1081 cgcaccggca gcggaagaag tcgtccaggc cctggcttcg ggcctgctgc tgcagcgcca
     1141 cccgtgggcg cgcctggcct ggcgccgggc caagcgcggt gccagcctgt acgtcagcgg
     1201 ccaggacttc gcgctgccgg tgaaggacgc gcagcgcctg gccggtgccg agcagctcga
     1261 cgccgcggcc tatcgcggcc tgtccgacaa gggccgtgcc gtgctccagc ggctgctggt
     1321 cggcggcgtg ttccagctga tcgaccccaa cgagctgtat gacgccgaag acgaggacga
     1381 cggcgaggac agcgtggtgc tgggcgaggt ggtcgaaggc cgtgaccgcg tggacgcgat
     1441 cgacgacgac gcggtgtccg acgatgtcca caccgtgacc gtccatgacg acggcatcga
     1501 agtcatcgtc aacttcgagg atcacgacga agacgacagc gacgacggtc gcgcctgagc
     1561 catcacgatg atccgggtcc agccggtcag ccacgccgac gcccacgtcg cgatccacga
     1621 cgtgcgccag cgcgtgttcg tgcaggaaca gggcatcgcc gccgagctgg aacgcgatgc
     1681 gctggacccg gtcagcgccc atgtgctggc gctggacgct gacgaccggc cggtcggcac
     1741 cggccggctg gcaccggacg gccgtatcgg tcgcatggcg gtgctggcca gccatcgcag
     1801 ccatggggtg ggtgaggccc tgctgctggc cctggtcgag gccgggcgcc ggctcggcct
     1861 ggccgaactg cacctgcacg cgcagctgcc ggcccgtgcg ttctatgccc gccagggctt
     1921 cctgcccgag ggcgatgtgt ttgaagaagc cggcatcggc caccagcaga tgcgccgccg
     1981 gctgggcgcg gccagcgcca tcgacagccg cgccgaagcg gtggacatca ccaccgccat
     2041 cgtccatcgc gcccgtcgcc agctgtggct gcacagccgc cagctggacc cgggcctgct
     2101 cgacacaccg cccgtgcagg ccgccctgcg ccgtttcgtc accgcccgcc acgacaagca
     2161 gctgcgggtg atcgtgcacg atgcggcggc gatcgcctcg gccggagcgc ccctgctggc
     2221 gctggcccag cgcctgccca gcgtgatcca gatccgcgag gtctccgacc cgatcgaccg
     2281 tgcgctggcc tcggcgtgca tgctcaacga tgccggcgac ttctactttc gtctgatcgg
     2341 ccaccgcctc gacggcgagg ccggcatcgc gctaccggca cgttcgcagc cgttcgagca
     2401 gcaattgcag cgtgtctggg accgttcgcg cgattgcagc gaacttcgcg cgctcggcct
     2461 ctgagcggag cgggctgcct caacctgtct ggaagcggca ccggtggacc tgcgatgcct
     2521 cgggcggcgc cccttcgtgt ccggttgggg gtacaatttg gctgtttgaa cgcgcccgcg
     2581 cagggctatt catcttcctg ccgggtcctt ctgaagccat accccacaaa gcgaatcaac
     2641 accctccatc gtggacaatc aactgaagca gtttgcgcaa tcttcgcaac tcgccggcgg
     2701 caacgcctcc tatgtcgagg acctgtacga gcagtacctg gtctccccgg atagtgtcga
     2761 tcccaaatgg aaaacctact tcgacggctt caagggccgc gaagcaggtg acattccgca
     2821 ctcggccgtc atctcccaca ttgcggacgc ggccaaggat gcgctgaagg ccggcaccgg
     2881 caacggtgcg ggcgacgagc gtgagcgcaa tgtcggtcgt ctgatcaccg cctaccgctc
     2941 gcgcggccat ctggacgccc gcctggaccc gctgggcctg accacgccgg tcaacacccc
     3001 ggacctgggc ctgccgttcc acagcctgtc cgatggcgac ctcaacagcg aattcagcac
     3061 cggcggcgtc ggtggccagc cgcgcatgaa gctgcgcgac ctgctggcgc gcctgaaggc
     3121 gacctacacc ggctcgatcg gtgcggagtt catgcacatc tccgaggtcg agcagcgcca
     3181 gtggatctac aagaagctgg aagcggccgg cggcaactac cagctggacg ctgacaccca
     3241 gcgccgcacc ctggagcgcc tgaccgcggc cgagggcctg gaacgctacc tgcacaccaa
     3301 gtacgtcggc cagaagcgct tctcgctgga aggcggcgat tcgctgatcc cgatgatgga
     3361 caccatcatc cgcagcgccg gcaaggatgg cgtcaaggac gtggtgatcg gcatggccca
     3421 ccgcggccgc ctgaacgtgc tggtcaacac cctgggcaag aacccgcgca agctgttcga
     3481 cgaattcgaa ggcaagttcg agcacgacga gcacgcttcg gccggcgatg tgaagtacca
     3541 catgggcttc tcggccgacg tcgccaccga cggcggcccg gtgcacctgg cgctggcgtt
     3601 caacccgtcg cacctggaaa tcgccgaccc ggtcgtggcc ggttccgtgc gttcgcgcca
     3661 ggagcgccgc aaggacaccg cgcgcaagca ggtcatgccg atcctgatcc acggcgacgc
     3721 ggccttctcc ggccaaggcg tggtcatgga gctgttccag atgtcgcagg cgcgcggctt
     3781 cgccgtcggc ggcaccgtgc acatcgtggt caacaaccag gtcggcttca ccacctccaa
     3841 cccgctggat acgcgctcca cgcgctacgc caccgacgtg gcgaagatga tcgccgcccc
     3901 ggtgctgcac gtgaacggcg atgatccgga agcggtggtg tttgccgcac agctggcctt
     3961 cgagttccgc cagacgttcg ccaaggacgt ggtcatcgac ctgatgtgct accgccgttg
     4021 gggccacaac gaggccgacg agccggcgat cacccagccg ctgatgtacc aggtgatccg
     4081 caagcacgcc accacccgcg agatgtacgc cgagcagctg gaaaaggcgg gcgtgatcgc
     4141 cgccggcgcc ggcaaggcga tggtcgatgc ctaccgcgag aagctggacg ccggtgaagt
     4201 gaccaccgag ctggccaagg tcgagaagac cccgccgagc agcccgctgt tcgtcgattg
     4261 gccgaagctg ctggaaggca agctgtccga tccggtctcg accaaggtcg agaagaacaa
     4321 gctggtcgag ctggccaagc tgatcaacac cgtgccggac gaagtgcagc tgcactcgcg
     4381 cgtggccaag gtctacgacg accgtcgcaa gatggctgcc ggcgagattc cgggcgactg
     4441 gggctttgcc gagaacctgg cctacgccac cctgctcgac gaaggccatg cactgcgcct
     4501 ggtcggccag gacgtcggcc gcggtacgtt cacgcaccgc cacgcgatcc tgcacgacca
     4561 gaagaccgac aactactaca tgccgctgcg gcagctggtg gattctccgg aaaaggccac
     4621 cgtcatcgac tcgctgctga gcgaagaagc ggtgatggcc tatgagtacg gcttctccac
     4681 caccgatccg aacacgttgt gcatctggga aggccagttc ggcgacttcg ccaacggcgc
     4741 ccaggtggtg atcgaccagt tcatcgctgc cggtgaagcc aagtggggcc gtatctccgg
     4801 cctgaccctg ctgctgccgc atggttatga agggcaaggc ccggaacaca gctcggcgcg
     4861 cctggagcgc ttcctgcagc tgtgcgcgct ggagaacatg ctggtggtgg tgccgtcgac
     4921 cccggcacag gccttccaca tgctgcgtcg ccagctgcac ctgaccaccc gcaagccgct
     4981 ggtggtgatg tcgccgaagt cgctgctgcg ccacaagctg gccgtgtcga ccctggacga
     5041 actggccaac ggcgagttcc agcacctgat cggcgacgcc aacgccgatg ccaagaaggt
     5101 caagcgcgtg gtgctgtgct cgggcaaggt ctactacgac ctgctggaag accagaccaa
     5161 gcgtggccag gacgacgtgg cgatcatccg cgtggagcag ctgtatccgt tcccgcgtgc
     5221 gctgctggcc gccgaactga agaagtacgg caaggccacc gacgtggtgt ggacgcagga
     5281 agaaccgcag aaccagggtg cgtggtacca gatccgccat cacctgcagt tctgcctggc
     5341 cgatggccag aacctgcact acgccggtcg cgcacgttcg gcttcgccgg ctgccggtca
     5401 catggctgac catgtccgcg aacagcagca gctggtcgcc gatgcactgg tcaacccgtt
     5461 caacgacacg ttcgctgaat aatcctcccc ctatttagaa gacaaaccag gaagctcccg
     5521 caatggccac cgaagtcaaa gccccggtac tgcccgaatc cgtcgccgac ggcaccatcg
     5581 ccacctggca caagaaggtg ggcgacgccg tcaagcgcga cgaaaacctg cttgacctgg
     5641 aaaccgacaa ggtcgtcctg gaagtgccgt cgccggtcga cggcgtgctc aaggaaatca
     5701 agttcgccga aggctcgacc gtgacctcca gccaggtcgt ggcgatcatc gaagaaggcg
     5761 ccgtggccgc tgccccggct ccggccgctg aagccgctcc ggctgccgct gctgccccgg
     5821 ccgccgcggc tccggccgct gccgccgctc cggccccggc tgccaagtcg gccgccgacg
     5881 cgctgccgcc gggcgcccgc ttcaccgcca tcaccgaagg cgtgaacccg gccgacgtcg
     5941 acggcaccgg ccgccgcggc gcggtgacca aggaagacat cgtcaacttc gcccgcaacg
     6001 gcggcgccgg caaggccggt ggcgcacgtc cggaagagcg cgtgccgatg acccgcatcc
     6061 gcaagcgcat cgccgagcgc ctgatggagt cgaagaactc gaccgccatg ctgaccacct
     6121 tcaacgaagt cgacctgtcc aaggtgtcgg cggcgcgcaa ggaactgcag gacgagttcg
     6181 tcaaggccca cggcatcaag ctgggcttca tgagcttctt cgtgaaggcc gctgccaacg
     6241 cgctgcagcg cttcccgctg gtcaacgcct cgatcgacgg cgacgacatc atctaccacg
     6301 gctactcgga catctcgatc gccgtctcga ccgagaaggg cctggtcacc ccggtcctgc
     6361 gcaacgtcga gcgcatgtcg ttcgccgaca tcgaaaagac catcgccgac tacgccaaga
     6421 aggcgcgtga tggcaagctg agcctggaag aactgcaggg cggcaccttc accgtgacca
     6481 acggcggcac cttcggctcg ctgctgtcga ccccgatcat caacccgccg cagagcgcca
     6541 tcctgggcat gcacgccatc aaggagcgtc cgatcgccca gaacggccag gtcgtgatcg
     6601 cgccgatgat gtacctggcg ctgtcctacg accaccgcat catcgacggc aaggactcgg
     6661 tgcagttcct ggtggacatc aagaaccagc tggaaaaccc gggccgcatg ctgttcggcc
     6721 tgtaagacac ctcccgcccc tccgcgcccg cgcggagggg ttctggtaat gcatcaagga
     6781 ataattcaat ggctgaacaa ttcgacgtcg tcgtcatcgg tgccggcccg gccggttacc
     6841 acgctgccat ccgcgcggca cagctgggcc tgaagaccgc ctgcatcgac gcagcgctgg
     6901 gcaaggacgg caagccggcc ctgggtggca cctgcctgcg cgtgggctgc atcccgtcca
     6961 aggcgctgct ggattcctcg cgccagttct ggaacatggg ccacatcttt ggcgaccatg
     7021 gcatcagctt caaggatgcc aagatcgacg tcgaggcgat ggttggccgc aaggacaaga
     7081 tcgtcaagca gttcaccggc ggcatcggca tgctgttcaa ggccaacaag gtcgccgctt
     7141 actacggttt cggcgaactg cagccgggca acgtggtcaa ggtcacccag catgacggtt
     7201 ccatcgtcga gctgaagggc accaacgtca tcatcgccgc cggttcggat tcgatcgaac
     7261 tgccgttcgc caagttcgac ggcgagacca tcgtcgacaa cgtcggcggc ctggacttca
     7321 ccgaagtgcc gaaccgcctg gcggtgatcg gcgccggcgt gatcggcctg gaactgggca
     7381 gcgtgtggaa gcgcctgggc gctgaagtca ccatcctgga agcactgccg gagttcctgg
     7441 ctgtggccga cgccgaagtg gccaagaccg ctgccaagga attcaagaag cagggcctgg
     7501 acatccgcct cggcgccaag gtctcgaaga ccgagatcac cggcaagggc aagaagaagg
     7561 aagtcgttgt cacttacacc gacagcgaag gcgaaaagac cctgaccgtg gacaagctgc
     7621 tggtggccgt tggccgtcgc gccgccacca agggcctgct ggctgaaggc accggcgtca
     7681 agatcaacga gcgcggccag atcgaagtcg acgcgcactg ccacaccggc gtcaacggcg
     7741 tgtgggcggt cggcgactgc gtgcgcggcc cgatgctggc gcacaagggc ttcgaggaag
     7801 gcatcgcggt ggctgagctg atcgccggcc tgccgggcca cgtcaacttc gacaccattc
     7861 cgtgggtcat ctacaccgag ccggaactgg cctgggtcgg caagaccgaa gcccagctga
     7921 aggccgaagg cattccgtac aaggccggca gcttcccgtt cgccgccaac ggccgtgccg
     7981 tggcgatgat cgagccggca ggtttcgtga agatcctggc ccacgccgag accgaccgca
     8041 tcctcggcat gcacctggtc ggcgccaacg tctccgagct ggtgcacgaa ggcgtgctga
     8101 ccatggagtt cagcggctcg gccgatgacc tggcccgcat ctgccacgcc cacccgtcgc
     8161 tgtcggaagt gatccacgac gcggcgatgg cggtcagcaa gcgcgccatc cacaaggcga
     8221 actgatcgtt cgctgacagt gccggccgct ggccggcaca ctccagcaat caaaaaaccc
     8281 cgcctcggcg gggtttttca ttggccgcgc agctcgtcca gcaacagccg ggtcgcccgc
     8341 gatgcctttc cggcatccga actgacaaga ccgaacaccc gttggatgag cggccgtagc
     8401 ggcatcaccc gcaggccatg ccggtcccca ggcagcgtgg attcgggcac cagcgaaaca
     8461 cccagccctt cgcggaccag tacgcaggca ctggcccagt cgcgcacggt cacccgtacg
     8521 tccgccattt ccaggccagc gtcactcatc aggcgctgac cattcaccgt acagccgccc
     8581 gttgcaagga tgaagggttc gcccgccagc tcgctcagcg ccaccccgcc cccggtggcg
     8641 cgacgcccca gcggatgcgc ctgcggcagc accgccatcc actcatcgct gcccagtgcc
     8701 agcgggtctc gatcagcagc ggggttcatc accaccccga catcgaccat gccggatgcc
     8761 agccagtgct cgacctccac gtcggtacct tccacggtca ccacctcgat gcccgggtga
     8821 cgccgccgga aatcacgcaa cagcggaggc aacacgcccg agatgatcga aggaaagctg
     8881 gccaggcgga tgcggactcc actcaccccg cggctgtcgt cggccagcgc gcgaatggcc
     8941 tgcaggccgc ccagcatgct gcgtgcgtgt tcgatcactc gccgccccag cgcggtgatc
     9001 tccacctgac gccgctcgcg cacgaagacc gcaaagccca acgcggcctc caactgggcc
     9061 agcgcctggc tggcaccgga ttggctgatg ccgacgcgat cggcgccgcg cgagatggtt
     9121 ccctcgtcgg ccacggcaac cagcaggcgc caatgggcaa gattcatcat ggcaggcagt
     9181 agcccagctt atggcatgga aatcgaagat tgattttacc ggataccgcc ggtccagcag
     9241 actgccctgc atcggctgtc ccagccgctc ttccctctcg agaccgtcca tgaagctgta
     9301 ttacgcgccc tacacctgct cgctgtcgcc gcatatcgtg ctgcgcgagc tcggcctccc
     9361 gttcgaactg gtcaaggtcg acaacgcgac caggcagacc gccgatggcc gcgacttccg
     9421 tacgatcaac cgcaagggat acgttgccgc gctggagctg gacgacggcc aggtgctgac
     9481 cgaaggcccg gtgatcgtcc agttcctggc cgacctgaaa cccgaatgcg cgctggcccc
     9541 gcccgtcggc agctgggagc gggtacgact gcaggagtgg ttgaactttg tcaccagcga
     9601 aatccatgcc ggttcggcac cgctgttcaa tgccgcgctg ccggaagagg ccaaggcatt
     9661 cttccgtgca aaactcttca agcgcttcga tctgctgcag gaaatcctgg cacaacagga
     9721 tttcctgatg ggttcaacct tcagcgtggt cgatgcctat ctgttcacgg tgcttggctg
     9781 gtgccgcttc ttctccatcg atctggcggc gtggccggcg ctgccggcct acacccgcag
     9841 ggtcaacgcg cgaccggccg tgcaggcagc gctgcgtgcc gaggcggcat gatgcaaggc
     9901 cgcgcccccg cgtgatttgg ccgttttgga gagcagccag gcatgggatc cgcgctacac
     9961 ctttccagcc ggcttcttcg gtgggtcgtc gcagatgcga tgctgcacca cggtcccgcc
    10021 ggccttccat tccttcacca cccggcagcg ctcccgggct ttcggtgtcg ccgccgctgc
    10081 ggcatccgct tcgtcggcag ccgcggtctg ttggcgctcg agccaggcag acgacggcgg
    10141 cacggccggc gtagcgagcg cgggaagcgc aaccagcgcc agcgcggcca acagcagcgc
    10201 cctcatgcgg ccaccgggcc gccaccgagc aaccgtgccg gcagcatgaa cagcgcgcgc
    10261 aggaacgcga acagcgccga gaaggtgatg ccgaccaggc ggaacggcag gctcagcagc
    10321 cacacgaacg gccaggcgat cagggcgagg atcgccagcg gccagcacag cacgaacagc
    10381 aggcaccaca caccgagcgc gaacagggtc ttcatcacgg tctccttggg gcggcacccc
    10441 gccgcctgtg gacaccatgg cgccctgccc tccccggccg caaacgattt gcgacgaaac
    10501 ccgggctggg ggcgatgaaa ccggtggtgg gaaaaccgga gat
//
LOCUS       DAOKIP010000139        10496 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.139,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000139 DAOKIP010000000
VERSION     DAOKIP010000139.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 10496)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10496)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10496
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.139"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..813)
                     /gene="queF"
                     /locus_tag="QEL58_002853"
     CDS             complement(<1..813)
                     /gene="queF"
                     /locus_tag="QEL58_002853"
                     /EC_number="1.7.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017171998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent 7-cyano-7-deazaguanine reductase
                     QueF"
                     /protein_id="HDS1677303.1"
                     /translation="MNTPQDSSLGREVSYPSQYDPGLLFPIPRSGARAEIGLDDAALP
                     FVGHDRWHAFELSWLDPRGKPQVAVATVQVPCTSPRLIESKSFKLYLNSLNSTRIDTA
                     EALRARIVADLSACAGAPVHVAFGLPGLRETPLGESIDGLAVEIDCYGPPQADFLAAD
                     AGQVVEETLVSALLKSNCPVTGQPDWATVSLRYRGPKIDRAGLLRYLVSYREHAEFHE
                     QCVERIFSEVSTRCQPEWLEVEARYTRRGGLDINPWRASPGIATPAATYRELR"
     gene            complement(1291..2610)
                     /locus_tag="QEL58_002854"
     CDS             complement(1291..2610)
                     /locus_tag="QEL58_002854"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019336711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HDS1677304.1"
                     /translation="MRRSLLLSALLLALPALAHAQDGQRPEVTAAAQRLQARVVEWRR
                     DFHQHPELSNREARTSAEVAKRLRAMGLKPKTGIAHHGVVAIIEGGKPGPKIALRADM
                     DALPVTEQTGLPFASKATDQYRGQTVGVMHACGHDAHTATLLGVAEALVSMKKDLPGQ
                     VMLIFQPAEEGAPPPEEGGAALMLKEGLFADFKPEAVFGLHVFSSVQAGQIAVRGGPL
                     MAASDRFGIKVIGRQTHGSAPWNGVDPIVATADLVGTAQTIVSRRANLSKQPAVLTFG
                     AINGGIRYNIIPDEVEMVGTIRTFDEGMRQQIFADLRNVAEHTAAAHGAKAVTDIYES
                     EGNPATVNDPALTAKMLPSLQAVVGKDNVYEPPLQMGAEDFSLYAKEVPGMFFFVGST
                     SVGIDPATAPANHSPKFLLDEKALDVGLRALLQVSLDYLHGAGTPAG"
     gene            2797..4041
                     /locus_tag="QEL58_002855"
     CDS             2797..4041
                     /locus_tag="QEL58_002855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016849343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HDS1677305.1"
                     /translation="MSRVWKIVLLVVAVLVLAVVGLRVAGGGKDKAGKPAAGARQGGE
                     DPDAGPVPVTVVDATRQDVPVYASALGTVTAMNTVTVSPQVGGQLMSLNFREGQEVKQ
                     GDVLAVIDPRTAQASYDQAAAAKRQNEALLATARSNFQRSNAPEYRQYVAKTDLDTQR
                     NQVAQYESAVAANEASMRSAQVQLQYTKVTAPISGIAGIRAVDAGNVVSAGTALVTLT
                     QIHPIHVLFNLPERQLGDVRQAQAAGTVPVAALDRADSHVLSGDGKLDVVDNLISADS
                     GTFKARAIFDNTDNGLWPGQFVNVRMQLRTIGGGVVIPTQAVLRGPDGEYVYIVQGDN
                     TVKMQTVRSGVEVGDSQVQIAEGLKGGERVVSEGQFRLKPGSKVTALKPGETPAAPTE
                     AELKAAEQKNGGGGGRRGGGPR"
     gene            4116..7349
                     /locus_tag="QEL58_002856"
     CDS             4116..7349
                     /locus_tag="QEL58_002856"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012481428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HDS1677306.1"
                     /translation="MGFSTIFIRRPIATSLLMAGLLLLGILGYRKLPVSALPEIDAPS
                     LVVTTQYPGANATTMASLVTTPLERQFGQISGLELMTSDSSAGLSTIILQFSMDRDID
                     IAAQDVQAAIRQATLPSSLPYQPVYNRVNPADAAIVTLKLTSDTRPLRDVNNYADSIL
                     AQRLSQVQGVGLVSIAGNVRPAVRIQVNPAQLSNMGLTLEQLRSALTQANVNAPKGSL
                     NGKTQSYSIGTNDQLASAAEYRDTIISYKNGRPVRLSDVADVVDGVENDQLAAWADGK
                     PAVLLEVRRQPGANIVQTVERIRAILPQLQGVLPADVHLEIFNDRTETIRASVHEVQF
                     TLILTIGLVVAVIFVFLRRLWATIIPSVAVPLSLAGTFAVMAFAGMSLDNLSLMALVV
                     ATGFVVDDAIVMIENIVRYIEQGKSGKEAAEIGARQIGFTVLSLTVSLVAVFLPLLLM
                     PGVTGRLFHEFAWVLSIAVVLSMLISLTLTPMMCAYLLKPDALPEGEDAHERAAAAGK
                     QNLWTRTVGLYEHSLDWVLGHQRLTLAVAGGALVLTVLLYVLIPKGLLPEQDTGLITG
                     VVQADQNIAFPQMEQRTKQVAEALRQDPDVTGVSAFIGAGSMNPTLNQGQLSIVLKER
                     SQRDGLDEILPRLQKAVAGIPGVALYLKPVQDVTLDTRVAATEYQYSLSDVDSATVAT
                     QATRLTEALRQRPELADVDNNLSNQGRALELNIDRDKASVLGVPMQTIDDTLYDAFGQ
                     RQISTIFTELNQYRVVLEVAPEFRTSTALMEQLAVASNGAGALTGTNATSFGQVTSSN
                     SSTATGIGAQNTGITVGAGNIIPLSALAEGKVSSAPLVVSHQQQLPAVTVSFNVAPGY
                     SLSEAVRAIQETKDGLDMPTHLHAEFIGKAAEFTGSQTDVVWLLLASLVVIYIVLGVL
                     YESYIHPITIISTLPPAGVGALLALMLCGLSLSVDGIVGIVLLIGIVKKNGIMMVDFA
                     IEARRAGANAHEAIRRACLLRFRPIMMTTAAAMLGALPLALGTGIGSELRRPLGIAIV
                     GGLLLSQLVTLYTTPVIYLYMERFSEWLARRREQRALRNGSLQEPQA"
     gene            7381..>10496
                     /locus_tag="QEL58_002857"
     CDS             7381..>10496
                     /locus_tag="QEL58_002857"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014038720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HDS1677307.1"
                     /translation="MNLSGPFIRRPIGTALLAIGLFMVGLICYLRLGVSALPNIEIPV
                     IFVHASQSGADAATMATTVTAPLERHLGQLPGIDRMRSSSSEGSSLVFMIFQSGHNID
                     SAALDVQTAINSAQADLPSGMGSPMYQKANPNDDPVIAIALTSQTQSADELYNVADSL
                     LAQRIRQISGVASVDIAGASTPAVRVDVNLRLMNALGLTADDLRNAVRAANVTSPTGF
                     LSDGNTTTAIIANDSVARAADFADLVVKTQGDGRVIRLKDIANVYDGQQDAYQAAWFD
                     HKPAVVMYVFTRAGANIVETVDRVKAQIPTLRDYLQPGTTMTPYFDRTPTIRSSLHEV
                     QITLLISLAMVVLTMALFLRRLAPTLIAAVTVPLSLAGAALVMYVMGFTLNNLSLLAL
                     VIAIGFVVDDAIVVIENIMRHLDEGMPRMQAALTGAREIGFTIVSITASLVAVFIPLL
                     FASGMMGAFFREFTVTLVAAIVVSMIVSLTLTPALCSRFLSAHDHAAPPSRFGRWLDA
                     SHERMLRIYTVFLDFSLRHALLMSLTPLILIGVTVFLFGAVKKGAFPPQDTGLIWGRA
                     NSSATVSFEDMVARQRRITDMLMADPAVKTVGVRLGNGRQGSSAQFNIELKSRSDGRR
                     ETTAHALARLSAKADRYPDLQLRLRAIQDLPSNDGGGSSQGAQYRISLQGNDLAALQE
                     WLPKLQAELKKNPKLRDVGTDVDNAGLRQNIQIDRAKAARLGITVGAIDGALYGAFGQ
                     RQISTIYSDINQYSVVVNALPSQTATPAALDEVYVRARNGDMVPITAVATQIPGLAPS
                     QITHENQYTTMDLSYNLAPDVSMGEAKAIIDATVAGMRMPGDIRLADDAGFGFNSDPS
                     DMLILVLAAILTVYLVLGMLYESLIHPVTILSTLPAAGVGALLALFGTNTELSVISMI
                     ALVLLIGIVKKNAIMMIDFALVAQREHGLAPRDAAREASIVRFRPIMMTTMVAILAAV
                     PLAIGLGEGSELRRPLGIAMIGGLLFSQSLTLLSTPALYVIFSCLAERWRARRARKRE
                     AKLLKRAQR"
BASE COUNT         1729 a         3607 c         3476 g         1684 t
ORIGIN      
        1 gcgcagttcg cggtaggtcg cggccggggt ggcaatgccg ggactggccc gccagggatt
       61 gatgtccagg ccaccacggc gggtatagcg cgcttccact tccagccact ccggctggca
      121 gcgcgtggac acttcgctga agatccgctc aacgcactgc tcgtggaact cggcgtgctc
      181 gcggtagctg accagatagc gcagcaggcc ggcgcggtcg atcttcggcc cgcggtagcg
      241 caggctgacc gtggcccagt ccggctggcc ggtgaccggg cagttggact tcagcagcgc
      301 cgagaccagg gtctcttcca ccacctggcc ggcatcagcg gcgaggaagt ccgcctgcgg
      361 ggggccatag cagtcgatct ccaccgccag cccgtcgatc gactcgccga gcggcgtctc
      421 gcgcaggccc ggcaggccga acgccacatg gaccggcgca ccggcacagg ccgacaggtc
      481 ggcgacgatg cgtgcgcgca gcgcttcggc ggtgtcgatg cgggtgctgt tgagggagtt
      541 gaggtacagc ttgaacgact tcgattcgat cagccgcggc gaggtgcacg gcacctgcac
      601 ggtggcgacg gcgacctgcg gcttgccgcg cgggtcgagc cagctcagtt cgaaggcatg
      661 ccagcggtca tggccgacga acggcagcgc cgcatcatcg aggccgatct cggcgcgggc
      721 gccgctgcgg gggatgggaa acagcaggcc gggatcgtac tgcgacgggt aactgacctc
      781 gcgaccgagg ctggaatcct gtggggtgtt catgggcggc attgtatcgc gccagaagcg
      841 ggccttcggc cgggccggcc aacggcggag cccctccgtg gtggttcaag gaaggatctc
      901 gggttggccg ggaggctggg atggctgggg gacgccgtga atccgtccat ggaggctcgg
      961 tcgccgcatc catgcggctc acgcccccag ccaacccacc ctcccggcca cggacagttt
     1021 cccgcgccac cacgggaaag atcaggaaaa tcaaaatcaa aagccgatgc ttcagacatt
     1081 ccggatgtct gccatccacg catggcgtgg atctaccggc aagccacggg atcgggtcta
     1141 gaggaaagcc ccctgagtca gggggcggcc gcgaagcggc gggggtctgg aagctggtaa
     1201 ggggggccca cggttcgcgc agcgaactgt gggagcgaca gcgcgcatgc gatgtcgcgt
     1261 acccagggct gcaagccctg ccggaaaccc tcagcccgca ggagtgccgg caccgtgcag
     1321 gtaatccagg ctcacctgca gcaacgcccg cagcccgaca tccagcgcct tctcatccag
     1381 caggaacttc ggcgaatggt tggccggcgc cgtcgccggg tcgatgccca cgctggtcga
     1441 acccacgaag aagaacatgc ccggcacttc cttcgcgtac agcgagaagt cttccgcgcc
     1501 catctgcagc ggcggctcgt acacgttgtc cttgcccacc accgcctgca ggctcggcag
     1561 catcttcgcg gtcagcgccg ggtcgttcac cgtcgccggg ttgccttccg actcgtagat
     1621 gtcggtcact gccttcgcgc cgtgcgcggc agcagtatgc tcggccacgt tgcgcaggtc
     1681 ggcgaagatc tgctggcgca tgccttcgtc gaaggtgcgg atggtgccga ccatctccac
     1741 ttcatccgga atgatgttgt agcggatgcc gccgttgatc gcgccgaaag tcagcaccgc
     1801 aggctgcttg gacaggttgg cgcggcggct gacgatggtc tgcgcggtgc cgaccagatc
     1861 ggcggtggcc acgatcgggt ccacgccatt ccacggtgcc gaaccgtgcg tctggcggcc
     1921 gatcaccttg atcccgaagc ggtccgaggc ggccatcagc gggccaccac gcactgcgat
     1981 ctgccctgcc tgcacgctgg agaacacatg caggccgaac accgcctccg gcttgaagtc
     2041 ggcgaacaat ccttccttca acatcaatgc cgcaccgccc tcttccggtg gcggtgcgcc
     2101 ttcctcggcc ggctggaaga tcagcatcac ctggcccggc aggtccttct tcatcgacac
     2161 cagcgcttcg gccacgccga gcagggtggc ggtgtgcgca tcatggccgc aggcatgcat
     2221 cacgcccacg gtctggccgc ggtactggtc ggtggccttg gaggcgaacg gcaggccggt
     2281 ctgctcggtc accggcaacg catccatgtc cgcgcgcagc gcgatcttcg ggcccggctt
     2341 gccgccttcg atgatcgcca ccacgccgtg atgggcgatg ccggtcttcg gcttcaggcc
     2401 catcgcacgc aggcgcttgg cgacctcggc cgaggtgcgc gcctcgcggt tggacagctc
     2461 cgggtgctgg tggaaatcgc ggcgccattc aaccacccgg gcctgcagcc gctgcgcggc
     2521 ggcggtcact tccgggcgct gcccgtcctg ggcatgggca agcgccggca gggccagcaa
     2581 cagggcggac aacagcagcg aacggcgcat cgcaatctcc acggcaaggg gttccagctg
     2641 aatgtagggc aacactgccg ccacgggaac ctccgcggct ggatccggtc ttagcgcccg
     2701 tcccatccgt catgcaggaa acgtgatgtg gcgcaggtat gctttgcgca ttgcccccgg
     2761 ggtcccgccc ggtccagccc tcttggagtc ctcgtaatgt cacgtgtttg gaagatcgtg
     2821 ctgctggtcg tggcggtact ggtgctggcc gtggtcggcc tgcgcgtcgc cggcggaggc
     2881 aaggacaagg ctggaaaacc cgctgcgggc gcgcgccagg gcggcgaaga cccggatgcc
     2941 ggcccggtac cggtgaccgt ggtcgacgcc acgcgccagg acgtaccggt gtacgccagc
     3001 gcgctgggca cggtgacggc gatgaacacg gtcaccgtca gcccgcaggt gggcggccag
     3061 ctgatgagcc tcaatttccg cgaaggccag gaagtgaagc agggtgacgt gctggcggtg
     3121 atcgatccgc gcaccgccca ggccagctat gaccaggcgg cggcggccaa gcgccagaac
     3181 gaagccctgc tggccaccgc acgctccaac ttccagcgtt cgaacgcgcc ggagtatcgc
     3241 cagtacgtcg ccaagaccga tctggataca cagcgaaacc aagtggcaca gtacgaaagc
     3301 gcggtggccg ccaacgaggc cagcatgcgc tcggcacagg tgcagctgca gtacaccaag
     3361 gtcaccgcac cgatctccgg cattgccggc atccgcgcgg tcgacgccgg caacgtggtc
     3421 agcgccggta ccgcgctggt cacgctgacc cagatccatc cgatccacgt gctgttcaac
     3481 ctgcccgagc gccagctcgg cgacgtgcgc caggcgcagg cggccggcac ggtgccggtg
     3541 gccgcgctgg accgcgccga ttcgcacgtg ctctccggtg acggcaagct ggacgtggtc
     3601 gacaacctga tcagcgccga cagcggcacg ttcaaggccc gcgcgatctt cgacaacacc
     3661 gacaacgggc tgtggccggg ccagttcgtc aacgtgcgca tgcagctgcg taccatcggt
     3721 ggcggcgtgg tcatcccgac ccaggcggtg ctgcgtggcc cggatggcga gtacgtctac
     3781 atcgtgcagg gcgacaacac ggtaaagatg cagaccgtgc gcagcggcgt ggaagtgggc
     3841 gacagccagg tgcagatcgc cgaaggcctg aagggtggcg agcgcgtggt cagtgaaggc
     3901 cagttccgcc tcaagccggg cagcaaggtc accgcgttga agccgggcga aacgccggcc
     3961 gcgccgaccg aggccgaact gaaggccgcc gagcagaaga acggtggcgg cggtggccgt
     4021 cgtggtggtg gcccgcgctg agcgcaggcc actgacctct cccgcgccgg catccccgcc
     4081 ggcgctgcca atgaagtgcc agcaaggatc agtccgtggg cttttcgacg atcttcatcc
     4141 gccgccccat cgccacctcg ctgttgatgg cggggctgtt gctgctgggc atcctcggtt
     4201 accgcaagct gccggtgtcg gcgctgccgg aaatcgatgc acccagcctg gtggtcacca
     4261 cccagtaccc cggcgccaat gccaccacca tggcttcgct ggtcaccacg ccactggagc
     4321 gccagttcgg gcagatctcc gggctggagc tgatgacctc cgactcctcg gccgggttgt
     4381 cgacgatcat cctgcagttc tcgatggacc gcgacatcga catcgccgcg caggacgtgc
     4441 aggcggcgat ccgccaggcc accctgccct cgtcgctgcc ctaccagccg gtctacaacc
     4501 gggtgaaccc ggccgacgcg gccatcgtca ccctgaagct gacctctgac acgcgcccgc
     4561 tgcgcgacgt caacaactac gccgactcga tcctggctca gcgcctgtcg caggtgcagg
     4621 gcgtgggcct ggtctcgatc gccggcaacg tgcgcccagc agtacgcatc caggtcaacc
     4681 cggcgcagct gtcgaacatg ggcctgaccc tggaacagct gcgcagcgcg ctgacccagg
     4741 ccaacgtcaa tgcgcccaag ggttcgttga acggcaagac ccagtcctac agcatcggca
     4801 ccaacgacca gctggccagt gccgccgagt accgcgacac catcatcagc tacaagaacg
     4861 gccgcccggt gcggttgtcc gacgtggccg acgtggtcga tggcgtggag aacgaccagc
     4921 tggccgcctg ggccgatggc aagcctgcgg tactgctgga agtgcgccgc cagcccggcg
     4981 ccaacatcgt gcagaccgtc gagcgcatcc gcgcgatcct gccgcagctg cagggcgtgc
     5041 tgccggccga cgtgcacctg gagatcttca acgaccgcac cgagaccatc cgcgcctcgg
     5101 tgcatgaagt gcagttcacc ctgatcctga ccatcggcct ggtggtggcg gtgatcttcg
     5161 tgttcctgcg ccggttgtgg gccacgatca tcccgtcggt ggcggtgccg ctgtcactgg
     5221 ccggcacttt cgcggtgatg gcgttcgccg gcatgtcgct ggacaacctt tcgctgatgg
     5281 cgctggtggt ggctaccggc ttcgtggtcg acgatgcgat cgtgatgatc gagaacatcg
     5341 tgcgctacat cgagcagggc aagagtggca aggaagcggc cgaaatcggt gcgcgccaga
     5401 tcggcttcac cgtgctgtcg ctgaccgtct cgctggtggc ggtgttcctg ccgctgctgc
     5461 tgatgcccgg cgtcaccggc cgcctgttcc atgagttcgc gtgggtgctg agcatcgccg
     5521 tggtgctgtc gatgctgatc tcgctgacgc tcaccccgat gatgtgcgcc tacctgctca
     5581 agcccgatgc cctgcccgag ggcgaggacg cgcatgagcg cgcagcggcg gccggcaagc
     5641 agaacctgtg gacacgcacc gtcggcctgt acgagcacag cctggactgg gtgctgggcc
     5701 accagcgcct gaccctggcc gtggccggcg gcgcgctggt gctgaccgtg ctgctgtacg
     5761 tgctgattcc caagggcctg ctccccgagc aggacaccgg cctgatcacc ggcgtggtgc
     5821 aggccgacca gaacatcgcc ttcccgcaga tggagcagcg caccaagcag gtcgcagaag
     5881 cactgcgtca ggacccggac gtgaccggcg tttctgcatt catcggtgcc ggcagcatga
     5941 accccacgct caaccagggc cagctgtcga tcgtgctgaa ggaacgcagc cagcgtgatg
     6001 gcctggacga gatcctgccg cgcctgcaga aggcggtggc cggcattccg ggcgtggcgc
     6061 tgtacctgaa gccggtgcag gacgtgaccc tggatacccg cgtggccgcc accgagtacc
     6121 agtattcgct gtcggacgtg gattcggcga cggtggccac ccaggccacg cgcctgaccg
     6181 aagcgctgcg ccagcgcccg gaactggccg acgtcgacaa caacctgtcc aaccagggcc
     6241 gcgcgcttga gctgaacatc gaccgcgaca aggccagcgt gctgggcgtg ccgatgcaga
     6301 ccatcgatga cacgctctac gatgctttcg gccagcgcca gatctcgacc atcttcaccg
     6361 agctcaacca gtaccgcgtg gtactggaag tggcaccgga gttccgcacc agcaccgcgc
     6421 tgatggaaca gctggccgtg gcctccaacg gtgccggcgc gctgaccggc accaatgcca
     6481 ccagcttcgg ccaggtcacc tcgtccaatt cgtccaccgc caccggcatc ggcgcgcaga
     6541 acaccggcat caccgttggc gccggcaaca tcatcccgct gtcggccttg gccgagggca
     6601 aggtgagcag cgcgccgctg gtggtcagcc accagcagca gttgccggcg gtgacggtct
     6661 cgttcaacgt ggcaccgggc tattcgctgt ccgaggccgt gcgcgcaatc caggagacca
     6721 aggacggcct ggacatgccc acccacctgc atgccgagtt catcggcaag gccgccgagt
     6781 tcaccggcag ccagaccgat gtggtgtggc tgctgctggc ctcgctggtg gtgatctaca
     6841 tcgtgctggg cgtgctctac gagagctaca tccacccgat cacgatcatc tccacgctgc
     6901 cgccggccgg tgtcggtgcg ctgctggcgc tgatgctgtg cgggctgagc ctgtcggtgg
     6961 atggcattgt cggcatcgtg ctgctgatcg gcatcgtcaa gaagaacggc atcatgatgg
     7021 tggacttcgc gatcgaggca cgtcgtgccg gtgccaacgc gcatgaagcg atccgtcgcg
     7081 cctgcctgct gcgcttccgc ccgatcatga tgaccaccgc cgccgccatg ctcggcgcgc
     7141 tgccactggc attgggcacc ggcatcggct cggaactgcg ccgcccgctg ggcatcgcca
     7201 tcgtcggcgg cctgctgctg tcgcagctgg tgaccctgta caccacgccg gtgatctacc
     7261 tgtacatgga gcgcttctcc gagtggctgg cccgccgccg cgaacagcgt gcgctgcgca
     7321 acggttcgct gcaggagccg caggcatgat ccacgccccg ctgctgcggg gggccgcacg
     7381 atgaacctgt ccggcccctt catccgccgc ccgatcggca ccgcgctgct ggccatcggc
     7441 ctgttcatgg tcggcctgat ctgctacctg cggctgggcg tgtcggcact gccgaacatc
     7501 gagatcccgg tgatcttcgt gcacgccagc cagtccggcg ccgatgcagc caccatggcg
     7561 accacggtca ccgcaccgct ggagcgccac ctgggccagc tgccgggcat cgaccgcatg
     7621 cgctcgtcga gctcggaagg cagctcgctg gtgttcatga tcttccagag cggtcacaac
     7681 atcgattcgg cggcgctgga cgtacagacc gcgatcaact cggcgcaggc cgacctgccc
     7741 tcgggcatgg gctcgccgat gtaccagaag gcgaatccga acgatgaccc ggtgatcgcc
     7801 atcgcgctga cctcgcagac gcagtcggcc gacgagctgt acaacgtcgc tgactcactg
     7861 ctggcgcagc gcatccgcca gatcagcggc gtcgcctcgg tcgacattgc cggtgcctcg
     7921 acgccggccg tgcgcgtgga cgtcaacctg cgcctgatga acgccctcgg cctgaccgcc
     7981 gacgacctgc gcaacgccgt gcgcgcggcc aacgtgacct cgcccaccgg cttcctcagc
     8041 gatggcaaca ccaccaccgc gatcatcgcc aacgattcgg tggcgcgtgc ggccgacttc
     8101 gccgacctgg tggtcaagac ccagggcgat ggccgggtga tccgcctgaa ggacatcgcc
     8161 aacgtctacg acggccagca ggacgcctac caggcggcct ggttcgacca caagccggcg
     8221 gtggtgatgt acgtgttcac ccgtgccggc gccaacatcg tggagaccgt ggaccgggtc
     8281 aaggcgcaga tcccgaccct gcgcgactac ctgcagccgg gcaccacgat gacgccgtac
     8341 ttcgaccgta cgccgaccat ccgttcctcg ctgcacgaag tgcagatcac cctgctgatc
     8401 agcctggcga tggtggtgct gaccatggcg ctgttcctgc gccggctggc accgaccctg
     8461 atcgccgcgg tgaccgtgcc gctgtcgctg gccggtgccg cgctggtgat gtacgtgatg
     8521 ggcttcaccc tgaacaacct gagcctgctg gcgctggtga tcgcgatcgg cttcgtggtc
     8581 gacgatgcca tcgtggtgat cgagaacatc atgcgccacc tcgacgaggg catgccgcgc
     8641 atgcaggcgg cgctgaccgg ggcccgcgag atcggcttca ccatcgtctc gatcaccgcc
     8701 tcgctggtgg cggtgttcat cccgctgctg ttcgccagcg gcatgatggg cgcgttcttc
     8761 cgcgaattca ccgtcaccct ggtggcggcc atcgtggtct cgatgatcgt ctcgctgacg
     8821 ctgaccccgg cgctgtgcag ccgcttcctc agcgcgcacg accacgcggc gccgccgtcg
     8881 cgcttcggcc gctggctcga tgccagccac gagcgcatgc tgcgcatcta caccgtgttc
     8941 ctcgacttct cgctgcgcca cgcgctgctg atgtcgttga ccccgttgat cctgatcggc
     9001 gtcaccgtgt tcctgttcgg tgcagtgaag aagggtgcgt tcccgccgca ggacaccggc
     9061 ctgatctggg gccgcgccaa ctccagcgcc accgtctcct tcgaggacat ggtcgcccgc
     9121 cagcgccgca tcaccgacat gctgatggcc gacccggcgg tgaagaccgt gggcgtacgc
     9181 ctgggcaacg gccgccaggg ctccagcgcg cagttcaaca tcgagctgaa atcgcgcagc
     9241 gacggccgtc gcgaaaccac cgcgcatgca ctggcgcggt tgagtgccaa ggccgaccgc
     9301 tacccggacc tgcagctgcg cctgcgcgcg atccaggatc ttcccagcaa cgatggcggt
     9361 ggctccagcc agggcgcgca gtaccgcatt tcgctgcagg gcaacgacct ggctgcactg
     9421 caggaatggc tgcccaagct tcaggcggaa ttgaagaaga acccgaaact gcgtgacgtc
     9481 ggcaccgatg tcgacaacgc cgggctgcgc cagaacatcc agatcgaccg tgccaaggcc
     9541 gcgcgcctgg gcatcaccgt cggcgccatc gatggcgcgc tgtacggagc cttcggccag
     9601 cgccagatct cgaccatcta ctcggacatc aaccagtaca gcgtggtggt caacgccctg
     9661 ccctcgcaga ccgccacgcc ggcggcgctg gatgaggtgt acgtgcgggc gcgcaacggc
     9721 gacatggtgc cgatcaccgc ggtcgccacc cagattccgg ggctggcacc gtcgcagatc
     9781 acccatgaaa accagtacac gacgatggac ctcagctaca acctggctcc ggacgtgagc
     9841 atgggcgagg ccaaggcgat catcgatgcg accgtggccg gcatgcgcat gccgggcgac
     9901 atccgtctgg ccgatgatgc gggcttcggg ttcaactccg atcccagcga catgctgatc
     9961 ctggtgctgg cggcgatcct caccgtgtac ctggtgctgg gcatgctcta cgagagcctg
    10021 atccacccgg tcaccatcct gtccacgctg ccggcggcgg gcgtgggtgc gctgctggcc
    10081 ttgttcggca ccaacaccga gctgtcggtg atctcgatga tcgcgctggt gctgctgatc
    10141 ggcatcgtca agaagaacgc gatcatgatg atcgacttcg cgctggtggc gcagcgcgag
    10201 cacgggctgg cgccccgcga cgccgcccgc gaggccagca tcgtgcgctt ccgcccgatc
    10261 atgatgacca ccatggtggc gatcctggcc gccgtgccgc tggcaatcgg cctcggcgaa
    10321 ggttccgaac tgcggcgtcc gctgggcatc gcgatgatcg gcggcctgct gttctcgcag
    10381 agcctgaccc tgctcagcac gccggcgctg tacgtgatct tctcgtgcct ggccgaacgc
    10441 tggcgcgcac gtcgcgcacg caagcgcgag gcgaagctgc tcaagcgcgc gcagcg
//
LOCUS       DAOKIP010000140        10481 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.140,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000140 DAOKIP010000000
VERSION     DAOKIP010000140.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 10481)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10481)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10481
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.140"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(3..803)
                     /locus_tag="QEL58_002858"
     CDS             complement(3..803)
                     /locus_tag="QEL58_002858"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010481879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-2,3-diacylglucosamine diphosphatase"
                     /protein_id="HDS1677308.1"
                     /translation="MSAPANLSPHRRAVFVSDVHLGSRHCHASELARFLSQLRCERLY
                     LVGDIIDLWWMAHRRANWRQSHSEVIQALHALRRAGTEIIYIPGNHDASLRQVCGLML
                     PAMQVRRRAIHVTADGRRLLVAHGDDYDGVTHFGGLQEKFGDWLYYRILTGNQALNAV
                     RRRLGMRYWSLSEFLKKRSGAAERYIERFVQAGLDDVRRRGLDGIVCGHIHRAALIER
                     DGLVYANDGDWVESLTALAEDHDGALRLLDHNGQTLVELPGARLSQAA"
     gene            complement(800..2515)
                     /locus_tag="QEL58_002859"
     CDS             complement(800..2515)
                     /locus_tag="QEL58_002859"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014036007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HDS1677309.1"
                     /translation="MQELEQRLQQRFPDWFHGRRGQLARPLLRSVGRWSRLDQIEAFL
                     QRSAGLRGFGFVAAGLEFIDGQYQVDPAALAKIPATGRLLIVANHPSGALDALALLDA
                     VGRIRRDVRIVANDLLGAIAPLQDLLLPVRILGGKAQRGSLHAVEEALAAEQCVIVFP
                     AGEVSRLSLRGIRDGRWQRGFVRFARAAGAPVLPVRVEARNSALFYGASTLFKPAGTA
                     LLAREMFTRRGRPLRLSIGEPMQLGKAGDPGAQLLAVRRALYALGRNGETGGAVACAG
                     PEPLASPVPPSQVAAGIAAATQLGQTADGKQILLATCTADSPLLLELGRLRELTFRQV
                     GEGTGRSRDLDDYDPQYEHIVIWDATAQRIAGAYRIMRGAQALARHGLSGLYSASLFR
                     YSDDAITHIAEGLELGRSFVVPDYWGSRSLDYLWQGIGAYLQCRPGIRYLFGAVSISA
                     ALPRDAREQLVAYYQRYYSGTAGLAESNRPFQYFAAPPSFGELDAGAAFDVLKANLAA
                     LGTGVPTLYRQYTDLCEPGGARFLAFGVDPDFSDSIDGLIEVDLCAIRPNKRKRYLRD
                     AGAAA"
     gene            2840..4051
                     /locus_tag="QEL58_002860"
     CDS             2840..4051
                     /locus_tag="QEL58_002860"
                     /EC_number="2.5.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004083625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine adenosyltransferase"
                     /protein_id="HDS1677310.1"
                     /translation="MSSYLFTSESVSEGHPDKVADQISDAVLDAILTQDQRARVACET
                     MVKTGVAIVAGEITTSAWIDLEALTRKVITDIGYDSSEVGFDGATCGVLNLIGKQSPH
                     IAQGVDRKKPEEMGAGDQGLMFGYATNETDSYMPAAIHLSHRLVEQQAKIRKKRNSPL
                     SWLRPDAKSQVTLRYENGVVSAIDAVVLSTQHAPGIKQKDLIEAVREEIIKPVLPAKW
                     LHKGTKFHINPTGKFEIGGPVGDCGLTGRKIIVDTYGGWARHGGGAFSGKDPSKVDRS
                     AAYAARYVAKNVVAAGLADRCEVQVSYAIGVAEPTSISVTTFGTGKISDDKIEKLIRK
                     HFDLRPYGIIKMLDLVHPMYQQTAAYGHFGRKPKEFSYLNGEGETVNATAFSWEKTDR
                     AAALRADAKLK"
     gene            4175..4681
                     /locus_tag="QEL58_002861"
     CDS             4175..4681
                     /locus_tag="QEL58_002861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HDS1677311.1"
                     /translation="MSTELKTHQLSMTVLMSPEMANFSGKVHGGAILRLLDQVAYACA
                     SRYAGSYVVTLSVDQVMFRQPIAVGELVTFLASVNHTGTSSMEIGIKVVAEDILKRSV
                     RHANSCFFTMVAVDEEGRPTPVPTLQPSTSDEKRRQAAAQIRRQLRQEMEQRHLELLA
                     SNPPSPEE"
     gene            complement(4712..5179)
                     /locus_tag="QEL58_002862"
     CDS             complement(4712..5179)
                     /locus_tag="QEL58_002862"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677312.1"
                     /translation="MELVHSWRITKYWQYTPEGYLSSHPSEWTEFCDVGRLVTLEDYQ
                     IVENAYLDAIRRFCVAAGVDSLCIHSLERRESRDYHEGQPLDLDGIERVARDALRNVI
                     WCKLVSETAEVHFGYDYYMYLVSSVDAESALSEADPLLNIQRYRSPYLREEEE"
     gene            complement(5180..7465)
                     /locus_tag="QEL58_002863"
     CDS             complement(5180..7465)
                     /locus_tag="QEL58_002863"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677313.1"
                     /translation="MAKDDERDAPPTIGSGYIGAQMTRALRALQEAANREQRQSAQAR
                     VDRWSRLLDGKALDLLQHGSRTPIEGAPAWATPEVVTGGFATGALLAGGPLLDWERHL
                     AAQVLDTGTGNERQRLNAWCLGDEGMAWLHARLQQGDYRVGVPEESALLTVAWLLQQG
                     AHAQVEAILAAIVGWFPSLRFYPEPVPLAAGNEKLPAGGDFTLFVETAGAVVAQLQRR
                     TSSARVKTQHHVLMQWRPLYATAVGLLLQTWRDGQPCMQFPQDWLPDAKQAVATFRTL
                     RRQSPARKASRHRDVELLEYLALCVDGVVLTPHQRSRVGQIVNDHAGKHGVPDSDTYA
                     ARMRFEQESVAAPPHAALARIAANRLRLFPADAGVVDVASLQRDVQPDEATSLVAAGS
                     VLPRTLRQHVARCQQGTVEQLIEAGLVPSLESLALLLPQLGARVAERGFTDPAHGRLY
                     AACRTAFDARRSLLLLNLQSQVRMAELPWAAGLESERQRGTPAAQRMLGDVVALALRH
                     YPETPLPNPLLRQLRSLADSAGADLPLVEELAADIFMGAFAPGFAAAARHAGRFTAGS
                     LYARYYGIDSMMLERLGEPRPRTGRRSQHRVDDLAGLCLARADLAPGQAGPAANGAVI
                     EQVQILTTHNLAVLFDRFQLDAVLAEELPDMIQRGFSAVCTDLQQVAPHWHAWLTARK
                     RGAYAWRQMVFFLSRLDDAGLAQSMATLRSLFAAQPSGFQRRFAPAMDGLVVASQGGQ
                     PAQVLLGWSPQSWLRPVTMEH"
     gene            complement(7485..7556)
                     /locus_tag="QEL58_002864"
     tRNA            complement(7485..7556)
                     /locus_tag="QEL58_002864"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(7522..7524),aa:Lys,seq:ctt)
     gene            complement(7640..10351)
                     /gene="ppc"
                     /locus_tag="QEL58_002865"
     CDS             complement(7640..10351)
                     /gene="ppc"
                     /locus_tag="QEL58_002865"
                     /EC_number="4.1.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017155365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxylase"
                     /protein_id="HDS1677314.1"
                     /translation="MNEYRSSIEFASPDLPLRDDVRRLGALVGDLLVEQVSAAFLDDV
                     EDVRTRAIARRENQAPLSELADGLAGRSPQQAETMVRAFSTYFQVVNIAERVHRIRRR
                     RDYQRAGTAAPQPDGLQDALQHLKAQGVGLDELAQWLPRIDIEPVFTAHPTEAVRRAL
                     LEKEQLMVASLVDNLDGQRTPGEAAADAARFRMALTASWQTTDSSPVRPTVDDEREHV
                     GFYLVQVLYRVIPVLYESLQQALRDTYGEELPLPRLLRFGTWVGGDMDGNPNVDASTI
                     RNTLDAQRQAVLGRYQKELLQLASLLSQSTERVGVSDALQARVAHYQQLLPQVQSRPR
                     HADMPYRLLNDRMRARLQATLDDGEGAYAGPDELIDDLQLILDSLRANRGEHAGGFAV
                     QRLLWRVKTFGFHLARLDVRQESSVHARALAAVLGGETAWDGLDAVGRARLLAPHASG
                     EAALPKSDDEGNQRLDAVFAALADARARHGGDALGSYIISMAHDRSDVLAVLALARRG
                     GLVEEGGSVPLDIAPLFETVDDLKRGTATLRDLLADPIYRAHLQARDDVQMVMLGYSD
                     SSKDGGIAASRWGLQRAQVELLEVAAEAGIRLTFFHGRGGSISRGGGKTTHAVDASPR
                     GSIDGRLRVTEQGEVIHRKYGIRALALRSLEQATGAVLRASLRPRAPEPREDDWRPVM
                     DAVSAASSGVYRAFVGQSGFMDYFRTATPIDVIERMTLGSRPSRRLGQDAALGNLRAI
                     PWVFAWSQARAVIPGWYGVGSGLQAAVDAGHEQTLRDMARDWPFFRTFLDDIAMVLSK
                     GDITIAEQFSRLSGDLHARFFPQVQRELELTRHWLLALMEQRTLLDHDARLALSIRLR
                     NPYVDPISVLQVDLLQRWRASGREDDDLLRALVACVNGVSQGVQNTG"
BASE COUNT         1829 a         3659 c         3408 g         1585 t
ORIGIN      
        1 gttcaggccg cctgcgacag gcgcgcgccc ggcagctcca ccagggtctg gccgttgtgg
       61 tcgagcaggc gcagcgcgcc gtcatggtct tcggccagcg cggtcaggct ctccacccag
      121 tcgccatcgt tggcgtagac caggccatcg cgttcaatca gcgccgcacg atggatatgc
      181 ccgcagacga tgccatccag gccacgccgc cgcacgtcat ccagcccggc ctgcacgaag
      241 cgctcgatgt agcgctcggc cgcaccactg cgcttcttca ggaactccga cagcgaccag
      301 tagcgcatgc ccagccggcg gcgcacggcg ttcagcgcct ggttgccggt caggatgcgg
      361 tagtacagcc agtcgccgaa cttttcctgc agcccgccga aatgggtcac gccgtcgtag
      421 tcgtcgccat gcgccaccag cagccggcga ccgtcggcgg tcacgtggat cgcgcgtcgg
      481 cgcacctgca tcgccggcag catcagcccg cacacctggc gcagcgatgc atcgtggttg
      541 cctgggatgt agatgatctc ggtgccggcc cggcgcagcg catgcagggc ctggatgact
      601 tcgctgtgcg actgccgcca gttggcgcgg cgatgggcca tccaccacag atcgatgatg
      661 tcgccgacca ggtacaggcg ttcgcagcgc agctgcgaga ggaaccgcgc cagctcgctg
      721 gcatggcaat gacgtgaacc caggtgcacg tcggagacga acactgcgcg ccggtgcggc
      781 gacaggttcg ccggcgcgct catgccgccg cccccgcgtc gcgcaggtag cgtttgcgct
      841 tgttgggccg gatcgcgcac aggtccactt cgatcaggcc gtcgatcgag tcactgaaat
      901 ccgggtcgac accgaaggca aggaagcgcg caccgccagg ttcgcacaga tcggtgtact
      961 gccggtacag cgtcggcacg ccggtgccga gtgcggccag gttggccttc agcacatcga
     1021 atgcagcgcc tgcatccagt tcaccgaagc tcggcggcgc ggcgaagtac tggaacggcc
     1081 ggttggactc ggccaggccg gcggtaccgc tgtaatagcg ctggtagtac gccaccagct
     1141 gctcgcgcgc atcgcgtggc agtgcggcgc tgatcgacac cgcgccgaac aggtagcgga
     1201 tgcccggccg gcactgcagg taggcaccga tgccctgcca caggtagtcc aggctgcggc
     1261 tgccccagta gtcgggcacc acgaagctgc ggcccagttc caggccctcg gcgatgtggg
     1321 tgatggcatc gtcggagtac cggaacagtg aggcgctgta gaggccggac aggccgtgcc
     1381 gggccagtgc ctgcgcaccg cgcatgatcc ggtaggcgcc ggcaatgcgc tgcgcggtgg
     1441 cgtcccagat cacgatgtgc tcgtactgcg gatcgtagtc gtccaggtcg cggctgcgcc
     1501 cggtgccctc gcccacctgg cggaaggtca gttcacgcag acggcccagc tccagcagca
     1561 acggcgaatc ggcggtgcag gtcgccagca ggatctgctt gccatcggcg gtctggccca
     1621 gctgggtcgc cgcggcgatg ccggcggcca cctgcgaagg cggcaccggc gatgccagcg
     1681 gctcgggtcc ggcgcaggca accgccccgc cggtctcgcc attgcggccc agcgcataca
     1741 gcgcgcgacg caccgccaac agctgcgccc cgggatcgcc cgccttgccc agctgcatcg
     1801 gctcgccgat gctcagccgc agcggacggc cacggcgggt gaacatctcg cgtgccagca
     1861 gcgcggtgcc agccggcttg aacagggtcg aagcgccgta gaacagcgcc gagttgcgcg
     1921 cctccacccg caccggcagc actggcgcgc ccgcagcgcg ggcgaagcgc acgaaaccgc
     1981 gctgccagcg accatcgcgg atgccgcgca gtgacagccg cgagacttcg ccggccggga
     2041 acacgatcac gcactgctcg gcggccagcg cctcttcaac cgcatgcagg ctgccacgct
     2101 gcgccttgcc accgaggatg cgcaccggca gcagcagatc ctgcagcggc gcgatcgcgc
     2161 ccagcaggtc gttggctacg atccgtacgt cgcggcggat gcggccgacc gcatccagca
     2221 gggccagcgc gtccagggca ccggaggggt ggtttgccac gatcagcagg cggccggtgg
     2281 ccgggatctt cgccagcgcg gccgggtcca cctggtactg gccgtcgatg aattccaggc
     2341 cggcggcgac gaagccgaat ccgcgcaggc ctgcgctgcg ctgcaggaag gcttcgatct
     2401 ggtccagccg cgaccagcgg ccgacgctgc gcagcaacgg ccgcgccagc tggccacggc
     2461 ggccatggaa ccaatcgggg aagcgttgct gaaggcgctg ttcgagttcc tgcatggcgg
     2521 ttccattcat gcccggcggc cggtttggcc gacagcctgc gcccggcagg cggcagccat
     2581 gtggcggttt cggggcagaa cgatgaccgc agaccgggcg tcgcaggcgg cgcggccggg
     2641 ccgtcaggcc cccggcccgt tgtcacgctg gtggaacact gggcaccgag gctggggccc
     2701 aatcctgcgg ggacggcccc tggcgggcct acacggcctt aaccaccgcc aaccggtaca
     2761 ggttcacaat gcacaggcgg cgcaccccgt gtatcatgcg cgcccatctt tccatccgaa
     2821 tcaagggata taccgcctga tgtccagcta tctcttcacc tccgagtcgg tctctgaagg
     2881 ccatccggac aaggttgccg accagatctc cgatgcggtg ctggacgcga tcctgaccca
     2941 ggaccagcgc gcccgcgtgg cctgcgagac catggtcaag accggtgttg ccattgtcgc
     3001 cggtgagatc accaccagcg cctggatcga cctggaagcg ctgacccgca aggtcatcac
     3061 ggacatcggc tatgacagct ccgaggtcgg cttcgacggc gccacctgcg gcgtgctgaa
     3121 tctgatcggc aagcagtcgc cgcacatcgc ccagggcgtg gaccgcaaga agccggaaga
     3181 aatgggcgcg ggcgaccagg gcctgatgtt cggctacgcc accaacgaga ccgacagcta
     3241 catgccggcc gcgatccacc tgtcgcaccg cctggtcgag cagcaggcca agatccgcaa
     3301 gaagcgcaac tcgccgctgt cgtggctgcg cccggacgcc aagagccagg tcaccctgcg
     3361 ctatgaaaac ggcgtggtct cggccatcga cgccgtggtg ctgtcgaccc agcacgcccc
     3421 gggcatcaag cagaaggacc tcatcgaggc cgtccgcgaa gagatcatca agccggtgct
     3481 gccggccaag tggctgcaca agggcaccaa gttccacatc aacccgaccg gcaagttcga
     3541 gatcggcggc ccggtgggcg actgcggcct gaccggccgc aagatcatcg tcgacaccta
     3601 cggcggctgg gcccgtcacg gtggtggcgc gttctccggc aaggacccgt ccaaggtcga
     3661 ccgttcggca gcctacgcgg cccgctacgt cgccaagaac gtggttgccg ccggcctggc
     3721 cgaccgttgc gaagtgcagg tttcctacgc catcggcgtg gctgagccga cctcgatctc
     3781 ggtcaccacc ttcggcaccg gcaagatcag cgacgacaag atcgagaagc tgatccgcaa
     3841 gcacttcgac ctgcgcccgt acggcatcat caagatgctg gacctggtgc acccgatgta
     3901 ccagcagacc gccgcctacg gccacttcgg ccgcaagccg aaggagttca gctacctcaa
     3961 cggcgaaggc gagaccgtca acgccacggc cttctcctgg gagaagaccg accgcgccgc
     4021 cgccctgcgc gccgatgcga agctgaagta agaaacacga agggccgctc acgcggccct
     4081 tctgctttct gtagagtcga gcttgctcgc ctttcttttt gcctgcgcca caggccaatg
     4141 cagtcgagca tggctcgact ctacaagggc gaccatgtcg accgaactga aaacccacca
     4201 actgtccatg accgtgctga tgtcgccgga gatggccaat ttctccggca aggtccacgg
     4261 cggtgcgatc ctgcgcctgc tcgaccaggt cgcctacgcc tgcgccagcc gatacgccgg
     4321 cagctacgtg gtcaccctgt cggtggacca ggtgatgttc cgccagccca tcgcggtggg
     4381 cgagctggtc accttcctgg cctcggtgaa ccataccggc acctcgtcga tggagatcgg
     4441 catcaaggtg gtggccgagg acatcctcaa gcgcagcgtg cgccacgcca acagctgctt
     4501 cttcaccatg gtggcggtgg atgaagaggg ccggccgacg ccggtgccga ccttgcaacc
     4561 atccacctcc gacgagaagc gccgccaggc cgccgcgcag atccgccgcc agctgcgcca
     4621 ggaaatggaa cagcgccatc tggaactgct ggcgtcgaac ccgccttcgc ctgaagagtg
     4681 atcgagtggc agcggtggtc actgcacgcc gctactcctc ttcctcccgc agatagggcg
     4741 aacggtagcg ctggatgttc aacagcggat cggcctccga cagcgcagac tcagcatcca
     4801 ccgacgacac caggtacatg tagtagtcgt aaccgaagtg aacttcggcg gtctcgctca
     4861 ccagtttgca ccagatgacg ttgcgcagcg catcgcgcgc cacccgctcg atgccgtcca
     4921 gatccagcgg ctggccctcg tggtagtcgc gtgactcacg ccgttcaagt gaatggatac
     4981 acagcgaatc cacgccagct gccacgcaga atcgccggat ggcatcgaga taggcgttct
     5041 ccacgatctg gtaatcctcg agggttacca acctgcccac gtcgcagaat tcggtccatt
     5101 cagagggatg ggaggacagg tacccctccg gcgtgtactg ccagtatttt gtaatgcgcc
     5161 aggaatgaac gagttccact cagtgctcca ttgtcaccgg ccgcaaccag gactgcggac
     5221 tccagccgag cagtacctgc gccggctgcc cgccctggga cgccaccacc aggccgtcca
     5281 tcgcgggcgc gaaacgccgc tggaaaccgg agggttgtgc ggcgaacagt gacctcagcg
     5341 tcgccatgga ttgcgccagg ccagcgtcat cgaggcgcga gaggaagaac accatctgcc
     5401 gccacgcata ggcaccacgc ttgcgggccg tcagccatgc atgccaatgc ggagcaacct
     5461 gctgcaggtc ggtacagacc gcagaaaaac cacgctggat catgtccggc agttcctcgg
     5521 ccagcaccgc gtcgagctgg aaacggtcga ataggaccgc caggttgtgg gtggtcagga
     5581 tctgcacctg ttcgatcact gcaccattcg cagcgggccc tgcctggccc ggcgcaaggt
     5641 ctgcccgagc caggcacagg cccgccagat cgtctacccg atgctgcgac cgtcggcccg
     5701 ttcggggcct cggttcgcca agccgctcga gcatcatgct gtcgataccg tagtaacggg
     5761 cgtacagact gcctgcggtg aaccgtccgg catggcgtgc cgctgccgcg aacccggggg
     5821 cgaacgcgcc catgaagata tctgcggcca gctcctccac caggggcaga tcagcaccag
     5881 cactgtccgc caggctccgc agctgccgca gcagggggtt tggcaagggg gtttccgggt
     5941 agtggcgcaa ggcaagcgcc acgacgtcgc ccagcatccg ctgggcggca ggcgtcccgc
     6001 gctgccgttc gctttccagt ccagcagccc atggcaactc cgccatgcgc acctgcgact
     6061 gcaggttcaa cagcaacagt gaacgacgtg catcgaaagc ggtccggcag gcggcataga
     6121 gacgaccatg cgccggatcg gtgaagccgc gctcggcaac ccgcgcaccc agctgcggaa
     6181 gcagcagcgc gagcgactcg agcgaaggaa ccaggccggc ttcgataagc tgttcaacgg
     6241 tgccctgctg gcaccgggcc acatgctgtc gcagcgtgcg gggcagaacg ctacccgccg
     6301 caaccaggga agtcgcttca tccggctgca cgtcccgctg cagggaagca acatccacga
     6361 caccggcatc ggcagggaac aggcgcagac gattggcggc gatgcgtgcg agcgcagcat
     6421 gcggaggtgc agcaacactc tcctgctcga agcgcatgcg tgccgcgtag gtgtccgagt
     6481 caggcacacc atgcttgcct gcgtgatcgt tcacgatctg gcccacgcgt gacctctggt
     6541 gtggcgtcag caccacacca tctacgcaca acgccaggta ctccagcagt tcaacatcac
     6601 gatgccggct cgccttgcgc gcgggtgatt gcctgcgcaa cgtgcggaac gtggccacgg
     6661 cctgcttcgc atccggcaac cagtcctgcg ggaactgcat gcagggctgg ccatcgcgcc
     6721 aggtctgcag gagcaacccg acagcggtcg cgtacaacgg gcgccattgc ataagcacgt
     6781 gatgctgcgt cttcacccgt gccgaactcg tacgccgctg caactgcgca acgacggcgc
     6841 cggcggtctc cacgaagagg gtgaagtctc ccccggccgg cagcttttca ttcccggccg
     6901 ccaacggtac cggctccgga tagaagcgaa ggctcgggaa ccagccgacg atggcggcca
     6961 gaatagcttc cacctgcgca tgcgccccct gctgcaggag ccaggccacg gtgagcagcg
     7021 ccgactcttc cggtacgccg acgcgatagt cgccctgctg caaccgcgcg tgcagccagg
     7081 ccatgccctc atcgcccagg caccatgcgt tcaggcgctg ccgctcattg ccggtgcccg
     7141 tgtccagcac ctgggccgca aggtgccttt cccaatccag caggggccca ccggccaaca
     7201 gcgcaccggt ggcgaagccg ccggtaacca cttccggcgt tgcccatgcg ggcgccccct
     7261 cgatgggtgt tcgtgagccg tgctgcagca ggtcaagcgc cttgccgtcg agcagccggc
     7321 tccagcgatc gacacgtgcc tgtgcggact ggcgctgctc tcgattggca gcctcctgca
     7381 acgcgcgcaa agcccgcgtc atctgggcgc caatgtagcc gctccctatc gtaggcggag
     7441 catcgcgttc gtcgtccttg gccatcgctg ctggaatccg tgtggtccgg gggctggaat
     7501 cgaaccagcg cccacccggt taagagccag gtgttctacc actgaactac cccggagtag
     7561 agcccgcatg ctgcccaatc gtagaccgca gggcaagcga tgaagggcag acggggattc
     7621 ctctccccag gaaagtggat caccccgtgt tctgcacacc ctgcgaaaca ccgttcacgc
     7681 acgccaccag cgcgcgcagc aggtcgtcat cctcgcgccc gctggcccgc cagcgctgca
     7741 gcaggtccac ctgcagcacg ctgatcggat cgacgtaggg attgcgcagg cggatcgaca
     7801 gcgccaaccg cgcatcgtgg tcgagcagcg tccgctgctc catcaacgcc agcagccagt
     7861 gccgggtgag ttccagttcg cgctgcacct gcgggaagaa gcgcgcgtgc aggtcgcccg
     7921 acaaccgcga gaactgctcg gcaatggtga tatcgccctt ggacagcacc atcgcgatgt
     7981 catccaggaa cgtacggaag aacggccagt ctcgcgccat atcgcgcagg gtctgctcgt
     8041 ggccggcatc gaccgcggcc tgcaggccgc tacccacgcc gtaccagccg ggaatgaccg
     8101 cacgcgcctg gctccaggca aatacccacg gaatcgcacg caggttgccc agtgctgcgt
     8161 cctgaccgag ccggcgcgac ggccgcgagc ccagcgtcat gcgctcgatc acatcgatcg
     8221 gcgtggcggt gcggaagtag tccatgaagc cggattggcc gacgaaggcg cgatacaccc
     8281 cgctgctggc tgcagatacc gcgtccatca ccggccgcca gtcgtcctcg cgcggctcag
     8341 gtgcgcgtgg ccgcaggctg gcacgcaata ccgcgccggt ggcctgttcc agcgaacgca
     8401 gggccagcgc acggataccg tacttgcggt ggatcacctc gccctgctcg gtcacccgca
     8461 ggcgaccatc gatgctgcca cgcggcgagg catccaccgc gtgcgtggtc ttgccgccac
     8521 cgcggctgat cgagccacca cgcccatgga agaaggtcag gcggatgccg gcctcggccg
     8581 ccacctccag cagttccacc tgcgcacgtt gcaggcccca gcgcgaggcg gcgatgccac
     8641 cgtccttgct gctgtccgaa tagcccagca tcaccatctg cacgtcgtcg cgtgcttgca
     8701 ggtgtgcgcg atagatcggg tcggccagca ggtcgcgcag ggtcgcggtg ccgcgcttga
     8761 ggtcatccac ggtctcgaac aggggggcga tgtccagcgg caccgaaccg ccctcttcca
     8821 ccaggccgcc acggcgtgcc aatgcgagca ccgccagtac gtcactgcgg tcatgcgcca
     8881 tcgagatgat gtagctgccc agcgcatcgc cgccatggcg cgcgcgtgca tcggccagtg
     8941 cggcgaatac cgcatccagg cgctggttgc cctcgtcgtc actcttcggc agtgcggctt
     9001 caccactggc atgcggcgcc agcaggcgcg cgcggcccac tgcgtccagg ccgtcccaag
     9061 cagtttcccc gcccagcacc gccgccagcg cgcgcgcatg cacgctcgac tcctggcgca
     9121 cgtccagccg tgccagatgg aagccgaagg tcttgacccg ccacagcagg cgctgcacgg
     9181 caaagccacc ggcatgctcg ccgcggttgg cgcgcaggct gtcgaggatc agctgcaggt
     9241 cgtcgatcag ttcgtcgggg ccggcatagg cgccctcgcc gtcgtccagc gtggcctgca
     9301 ggcgcgcgcg catgcggtcg ttgagcaggc ggtacggcat gtcggcatgg cgcggccgtg
     9361 actgtacctg cggcagcagc tgctggtagt gcgccacgcg cgcctgcaat gcatcgctga
     9421 cccccacccg ctcggtggac tggctgagca ggctggccag ctgcaacagt tccttctggt
     9481 agcgccccag taccgcctgg cgctgcgcat ccagcgtgtt gcggatggtg ctggcatcca
     9541 cgttcggatt gccatccatg tcgccgccca cccaggtgcc gaagcgcagc aggcgcggca
     9601 gcggcagttc ttcgccgtag gtatcgcgca gtgcctgctg cagcgattcg tacagcaccg
     9661 ggatgacccg gtacagcacc tgcaccaggt agaagccgac gtgctcgcgc tcgtcatcga
     9721 cagtgggccg caccggcgag gaatcggtgg tctgccacga cgcggtcagc gccatgcgga
     9781 agcgcgcggc atcggccgcg gcttcgcccg gcgtgcgctg gccgtcgaga ttgtcgacca
     9841 ggctggccac catcagctgc tctttctcca gcagcgcgcg gcgcacggct tcggtgggat
     9901 gcgcggtgaa caccggctcg atgtcgatgc gcggcagcca ctgcgccagc tcgtccaggc
     9961 ccacgccctg cgccttcagg tgctgcagcg cgtcctgcag gccatcgggc tgcggcgcgg
    10021 cagtgccggc ccgctggtag tcacgccggc ggcggatgcg atgcacgcgc tcggcgatgt
    10081 tgaccacctg gaagtaggtg ctgaaggccc gcaccatggt ctcggcctgc tgcggcgagc
    10141 gcccggccag gccatcggcc agctccgaca gcggcgcctg gttctcgcgg cgggcgatgg
    10201 cgcgggtgcg cacgtcttcc acatcgtcga ggaaagcggc ggacacctgt tccaccagca
    10261 ggtcgccgac cagcgcaccc agccggcgca cgtcatcgcg aagcggaaga tcgggagaag
    10321 cgaactcgat gctgctgcgg tactcgttca tcggcgacgc acaggcctcg gtcaacggat
    10381 ccagacccca agcctatccc agatcgggcg tcgtgctgcg atgcaaaaat ggtttcatct
    10441 ggtagtgccg gccgctggtc ggcaacctca ggttgcgtgg g
//
LOCUS       DAOKIP010000141        10406 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.141,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000141 DAOKIP010000000
VERSION     DAOKIP010000141.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 10406)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10406)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10406
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.141"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(5..757)
                     /locus_tag="QEL58_002866"
     CDS             complement(5..757)
                     /locus_tag="QEL58_002866"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDS1677315.1"
                     /translation="MSRPSGAPPANNDPASPSCPTLDCLHCSVRHLAVCSALSPDEVQ
                     ALEQVTVSQQVSMGSTLARTGEERDHVYTLTAGALRLVRTLADGRRQINGFVLPGDYL
                     GLSSSDHHRYDIEAIADSRVCRVALPQMKVLRSRFPHLERKLLQRACQELDAAQDAAL
                     ALARLQPAEKLADFLLRLAAREARLGGDGLRVSLPMGRGDIADHLGLTMETVSRTFTK
                     LRQQGLIALPHLNVVEILDEDGLRELAGEGLI"
     gene            884..2281
                     /locus_tag="QEL58_002867"
     CDS             884..2281
                     /locus_tag="QEL58_002867"
                     /EC_number="6.1.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine--tRNA ligase"
                     /protein_id="HDS1677316.1"
                     /translation="MIKPRTPPGTLELLPREQIAFQRMLDVIRRNYERFGFLPVETPV
                     FELSDVLLTKSGGETERQVYFVQSTGALANAAESGDRSLPEMALRFDLTVPLARYVAE
                     HEHELTFPFRRYQMQRVYRGERAQRGRFREFYQCDIDVIGKDSLSVRYDAEVLAVIHA
                     VFSELRIGDFSIQLNNRKLMRGFFESLGVAEGERQLAVLREVDKLDKRGADYVRETLV
                     GEDFGIPAEQVEKILAFVAVRSQGHADALAQLAALEAGAASSETLRTGVAELREVLQL
                     VQALGVPESAYCLNFSIARGLDYYTGTVYETTLTDHPQIGSICSGGRYEDLASHYSKS
                     KLPGVGISIGLSRLFWQLREAGLIDGIEGSSVQALVALMDEQGIPQSLDIARRLRAGG
                     INTEVQMEPKKIGKQFQYAAKAGIRFVVLAGEDELARGVVAVKDLLREQQFEVSRDEL
                     ASTLQVELEQSKAMA"
     gene            2278..2574
                     /locus_tag="QEL58_002868"
     CDS             2278..2574
                     /locus_tag="QEL58_002868"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008264560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677317.1"
                     /translation="MKRAAAGALSALLLAGCQSDPVLHSARIGPAYYRLQVDRCHVID
                     HAQLEEDLRALASRKCPTGAGALENIQPLPSRQGSLFGECLRRGALQAEVRCHP"
     gene            3000..3308
                     /locus_tag="QEL58_002869"
     CDS             3000..3308
                     /locus_tag="QEL58_002869"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005416326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDS1677318.1"
                     /translation="MKARPEIAAKDPKADLQALAKAFAALREPEQVEAFLRDLCTPAE
                     LEAMADRWKVVPLLQQGVPYREIHERTGVSVTTTGRVARTLEHGHRGYAAAIDRLASR
                     "
     gene            3343..4254
                     /locus_tag="QEL58_002870"
     CDS             3343..4254
                     /locus_tag="QEL58_002870"
                     /EC_number="2.4.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019237692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase"
                     /protein_id="HDS1677319.1"
                     /translation="MSATQAAPARDRLRIAIQKSGRLAEPARNLLSACGLSWRESRDK
                     LFCYGESLPVDLLLVRDDDIPGLIADGVCDLGIVGRNELDEQAAARRQIGLPDAYQAL
                     RGLGFGQCRLMLAVPEEWQWQGPAQLAGTRIATSYPAILTQWLAEQGVDAQVVELSGS
                     VEIAPRLGTADLICDLVSSGATLRANQLTPVHNLLDSEAVLAGAVREPDDARASLRAM
                     LLRRLDGVVQRQDRKLLMFRASEDRVDALAQLLADAEPLVRLPADGGALRLQTMCPGP
                     LSWQRMEELERAGAQGLMVLSVERSLA"
     gene            4251..5546
                     /gene="hisD"
                     /locus_tag="QEL58_002871"
     CDS             4251..5546
                     /gene="hisD"
                     /locus_tag="QEL58_002871"
                     /EC_number="1.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011347185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol dehydrogenase"
                     /protein_id="HDS1677320.1"
                     /translation="MNRLIWSRLDEPARSAALTRPVQAVAQQTRDAVAALIAQVRAQG
                     DDALRAITARFDGVELASFEVSEAEFAAAEAAVPAELRQAMVDAAERIARFHAAGMGK
                     GYAVETAPGVVCERMLRPIGRVGLYVPAGSAPLPSTALMLGVPAQLAGCPQVVLCTPP
                     RADGSADPAVLVAARLTGVQRVFKLGGAQAIAAMAYGTATIPACDKLFGPGNSFVTEA
                     KQQVAQGGAAAIDMPAGPSEVLVIADAGATPAFVAADLLSQAEHGPDSQVLLLTDDAA
                     MLAAVEAEVERQVALLPRQQIARQALSASRLIQVETLDEAFAISNRYAPEHLILALRE
                     PRDWLGQVQAAGSVFLGDYTPEALGDYCSGTNHVLPTAGAARAYSGVSVASFQNLISV
                     QSASADGLAAIGGCARIIARAEGLDAHERAVALRMEVAA"
     gene            5543..6634
                     /locus_tag="QEL58_002872"
     CDS             5543..6634
                     /locus_tag="QEL58_002872"
                     /EC_number="2.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate transaminase"
                     /protein_id="HDS1677321.1"
                     /translation="MSAIDDVLALVRPDLQAFAGYSSARSAAVQGEVWLNANESAWAN
                     PADAAGSSRRYPEPQPLALREGLAALYGVTPQQLLVGRGSDEAIDLLVRALCVPGRDG
                     VLVTSPVFGMYAVCARLQGAPLIDVPLVDGEDGLRADLDAVIRTAREQSARLVFLCAP
                     SNPAGSDMSLDEIERVATALRGQALVVVDEAYVEYAQRVSATTLLAAHANLAVLRTLS
                     KAHALAAARVGALIAAPDLIAVLRRCQAPYPVPTPCAELAVQALQPAALARTAERVAT
                     VIGERKRLFAALPGLPGVRRVYRSAGNYLLVRFADAQAAFDTLLEAGVVVRDQRAAPQ
                     LGDALRISIGSPEDNDRVLAALSARRAAA"
     gene            6631..7704
                     /gene="hisB"
                     /locus_tag="QEL58_002873"
     CDS             6631..7704
                     /gene="hisB"
                     /locus_tag="QEL58_002873"
                     /EC_number="3.1.3.15"
                     /EC_number="4.2.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008571443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     histidinol-phosphatase/imidazoleglycerol-phosphate
                     dehydratase HisB"
                     /protein_id="HDS1677322.1"
                     /translation="MTPILFIDRDGTLIEEPADFQIDAYEKLRFVPQVIPALLKLRDA
                     GYQFVIVTNQDGLGSESYPRASFEGPNDLMLQIFESQGITFRDVLIDCSWPQDNAPTR
                     KPGIGLMTAYLQDRSIDWARSGMVGDRITDLQFADNLNIRGFQLRTEQFGGEWDWPGI
                     AHALADAPRTAVVQRNTKETRIRVELDLDRVGDARISTGLPFFDHMLEQIGKHGGFAL
                     DIQAEGDLHIDEHHTIEDTGLALGQALREALGDKRGIGRYGFTLPMDETLASAALDFS
                     GRPYFVFEGEFKRERVGDMPTELVPHFFRSLCDASGLNLNLQVRGDNDHHKVEACFKA
                     LARALRPALARQGTALPSTKGAL"
     gene            7701..8303
                     /gene="hisH"
                     /locus_tag="QEL58_002874"
     CDS             7701..8303
                     /gene="hisH"
                     /locus_tag="QEL58_002874"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisH"
                     /protein_id="HDS1677323.1"
                     /translation="MSDVALIDAGGANLGSVRYALERLGATVRLVRDADGLVGAQRVI
                     LPGVGAAGPGMQRLHAQGLVEPLQRLEVPLMGICLGMQLLFERSEEAGVETLGLIPGV
                     VRKLVPACGIRVPHMGWNRLLPLRESLLLQGVPERASAYFVHSYAAPLNTHTVAACDH
                     GGLFTAVVEQGRYYGAQFHPERSGETGSLMLRNFLEGTAA"
     gene            8300..9034
                     /gene="hisA"
                     /locus_tag="QEL58_002875"
     CDS             8300..9034
                     /gene="hisA"
                     /locus_tag="QEL58_002875"
                     /EC_number="5.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017155313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-(5-phosphoribosyl)-5-[(5-
                     phosphoribosylamino)methylideneamino]imidazole-4-
                     carboxamide isomerase"
                     /protein_id="HDS1677324.1"
                     /translation="MSFIVYPALDIRDGRVVRLRQGDYAQETSYGDDPLPRAQAFAAQ
                     GAQWMHLVDLDAARAGGYTLAPLLAAIRSQTTLQVQTGGGVRGRDDVARILDAGAGRV
                     VVGSLAVRRPDEVVGWLDEFGAEHITIALDARQDAQGQWQLPVHGWTENAGVTLDDLA
                     LRYARAGMRHLLCTDIARDGMLAGPNIGLYAHLSALLPGVAVQASGGIRDVADVGEAR
                     DAGCGGAILGKALLEQRMDLAEALAC"
     gene            9028..9804
                     /gene="hisF"
                     /locus_tag="QEL58_002876"
     CDS             9028..9804
                     /gene="hisF"
                     /locus_tag="QEL58_002876"
                     /EC_number="4.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014646953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisF"
                     /protein_id="HDS1677325.1"
                     /translation="MLSRRIIPCLDVRDGRVVKGVRFRDHVDMGDIAELAQRYRDQGA
                     DELVFYDIGASPEARSVDVAWIERIARLIDIPFCVAGGIDSVETARRVLFAGADKVSI
                     NSPALGRPQLITELADEFGVQCVVVGVDSVREADGQWRVRRFSGDPDKTQAVPVRTLD
                     WIVEAQQRGAGEIVLNCMDSDGVRRGYDIAQLQQARALCQVPLIASGGAGAMEHFAEA
                     FDQADVDGALAASVFHSGAIAIPELKRYLRGQQIEVRDVY"
     gene            9794..>10406
                     /locus_tag="QEL58_002877"
     CDS             9794..>10406
                     /locus_tag="QEL58_002877"
                     /EC_number="3.5.4.19"
                     /EC_number="3.6.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005416333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphoribosyl-AMP
                     cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE"
                     /protein_id="HDS1677326.1"
                     /translation="MSIEVRPSPDALQALDWRKGEGLLPAVVQDADTLQVLMLGYVSA
                     ESLAATLAIGHMTFFSRSKQRLWTKGEQSGNVLVVQSIRVDCDADTLLVMARPAGPTC
                     HTGAESCFDQAPKDFLGGLGQLVAMREAQRPPGSYTTSLFEGGIRRIAQKVGEEGVET
                     ALAAVAQDDEALLGEASDLLYHLLVLLRARGLSLDDARAVLEKR"
BASE COUNT         1593 a         3381 c         3736 g         1696 t
ORIGIN      
        1 gcggtcagat caacccttca ccggccagct cacgcagccc gtcctcgtcg aggatctcca
       61 ccacgttcag gtggggcagg gcgatcaggc cctgctggcg cagcttggtg aaggtacggc
      121 tgactgtttc catggtcagg ccgagatggt cggcgatgtc gccgcggccc atcggcagcg
      181 acacgcgcag gccgtcaccg ccgaggcggg cctcgcgcgc ggccaggcgc agcaggaagt
      241 cggccagctt ctcggccggc tgcaggcgcg ccagtgccaa tgcggcgtcc tgcgcggcat
      301 ccagttcctg gcaggcgcgc tgcagcagct tgcgctccag gtgcgggaaa cggctgcgca
      361 acaccttcat ctgcggcagt gcgacgcggc acacgcggct gtcggcgatc gcctcgatgt
      421 cgtagcggtg atgatcgctg ctgctgaggc cgaggtagtc cccgggcagc acgaaaccgt
      481 tgatctggcg gcggccgtcg gccagggtgc gcaccaggcg cagcgccccg gcggtcaatg
      541 tatagacatg gtcacgctct tcgccggtgc gggccaatgt gctgcccatg ctgacctgct
      601 gtgaaacagt gacctgctcc aacgcctgca cttcgtcggg cgacagcgcc gagcacaccg
      661 ccaggtggcg aaccgagcag tgcaggcagt ccagcgtggg gcaggacggc gaggcgggat
      721 cgttgttggc gggcggagcg ccggaaggcc gtgacatgtt gcgggggcgt atcgcggtcg
      781 gggagggcct tatgatactt caagcggccg ttcgaccctg cccgaggcgg gggcgctaga
      841 atgtcgcccc ctcccacgtc ccgttccagc aggagttccg cccgtgatca agccccgtac
      901 cccgcccggc acccttgaac tgctgccgcg cgagcagatt gcgttccagc gcatgctgga
      961 cgtgatccgc cgcaactacg agcgcttcgg gttcctgccg gtggagacgc cggtgttcga
     1021 gctgtccgac gtgctgctga ccaagtccgg tggcgagacc gagcgtcagg tgtacttcgt
     1081 gcagtccacc ggtgcgctgg ccaatgccgc cgaatcgggc gaccgctcgc tgccggaaat
     1141 ggcgctgcgc ttcgacctca ccgtgccgct ggcgcgctat gtcgccgagc acgagcatga
     1201 actgacgttc ccgttccgcc gctaccagat gcagcgcgtc tatcgcggcg agcgcgccca
     1261 gcgtggccgt ttccgtgagt tctaccagtg cgacatcgat gtgatcggca aggacagcct
     1321 gagcgtgcgt tacgacgccg aagtgctggc ggtcatccat gcggtgttct cggaactgcg
     1381 catcggtgac ttcagcatcc agctgaacaa ccgcaagctg atgcgcggtt tcttcgagag
     1441 cctgggcgtg gccgagggcg aacgccagtt ggcggtgttg cgtgaagtgg acaagctgga
     1501 caagcgcggt gccgattacg tgcgcgagac gctggtgggc gaggacttcg gcattccggc
     1561 cgagcaggtc gagaagatcc tggccttcgt cgccgtacgt tcgcagggcc atgccgatgc
     1621 gctggcgcag ctggccgcgc tggaggccgg tgcggcttcg tcggaaaccc tgcgtaccgg
     1681 cgtggccgag ctgcgcgaag tgctgcagct ggtgcaggcg ctgggcgtgc cggaatccgc
     1741 gtactgcctg aatttctcca tcgcccgcgg cctggattac tacaccggca ccgtctacga
     1801 gaccacgctg accgaccacc cgcagatcgg ctcgatctgc tcgggcggcc gttacgaaga
     1861 cctggccagc cactacagca agtccaagct gccgggcgtg ggcatctcca tcggcctgtc
     1921 gcgcctgttc tggcagctgc gcgaggctgg cctgatcgat ggcatcgaag gcagcagcgt
     1981 gcaggcactg gtggcgctga tggacgagca gggcataccg cagtcgctgg atatcgcccg
     2041 ccgcctgcgt gccggtggca tcaacaccga agtgcagatg gagccgaaga agatcggcaa
     2101 gcagttccag tacgcggcca aggccggcat ccgcttcgtg gtgctggcgg gcgaggacga
     2161 gctggcccgc ggcgtggtgg cggtaaagga cctgctgcgc gagcagcagt tcgaagtgtc
     2221 gcgcgatgag ctggccagca cattgcaggt ggagctggag cagtcgaagg cgatggcatg
     2281 aagcgagccg ccgcaggagc gttgagtgcg ctcctgctgg cgggttgcca gagtgatccg
     2341 gtgctgcaca gcgcgcggat cgggccggcg tactatcggt tgcaggtcga tcgttgccat
     2401 gtgatcgatc acgcgcagct ggaggaggac ctgcgggccc tggcctcgcg gaagtgcccg
     2461 acgggcgcag gggcgttgga gaacatccag cccttgccaa gccggcaggg cagcctgttc
     2521 ggcgaatgcc tgcggcgcgg ggcgttgcag gcggaagtgc gctgccaccc ctgagtcggg
     2581 ccaggttgtt gatttgaaag aagaacgccc gccttttggt gggcgttctg cgtttcaggg
     2641 caaacagcag tcgagcatgg ctcgactcta caaaagccgg tttcgatccg acccacgccg
     2701 ttctgaaaga tcgcgggaaa ctgtcgaagg cggggtgggt ccgccggtgg caggggtgtg
     2761 agcggcatgg atgccgcgac caagccccca tggacgggtt cacggcgtcc cctgccaccg
     2821 gacccagccc gccaaccctc agtagcccgg ctttcagtag cccggctttt gccgttgctc
     2881 aggcctctgc gggtgcaggg cggcagccct gccatgcccc caatccacga tttgacgcac
     2941 tgcgcaagaa tgcgttaatg tactaacgcg ctattacatt gatgcatgga aacgaccccg
     3001 tgaaagcccg ccccgagatt gccgccaaag acccgaaggc cgacctgcag gccctggcca
     3061 aggcctttgc cgcgctgcgc gagccagaac aggtcgaggc cttcctgcgc gacctgtgca
     3121 cgccggccga gctggaagcc atggccgacc gctggaaggt ggtgccccta ctgcagcagg
     3181 gcgtgccgta ccgcgagatc cacgagcgca ccggcgtcag cgtgaccacc accggacggg
     3241 tggcgcgcac gctcgaacat gggcatcgag gctatgccgc cgccattgac cgccttgctt
     3301 cgcgctgatc cgcgccccgt tccgaccttc gagacctccc ccatgagtgc aacccaggca
     3361 gcgccggcac gagaccggtt gcgtatcgcc atccagaaga gtggccggct ggccgaaccc
     3421 gcccgcaacc tgctcagcgc ctgcggcctg agctggcgcg agagccgtga caagctgttc
     3481 tgctacggcg aatcgctgcc ggtggacctg ctgctggtgc gcgacgacga catccccggc
     3541 ctgatcgccg acggcgtctg cgacctcggc atcgtcggtc gcaacgagct ggacgaacag
     3601 gccgcggcac gccgccagat cggcctgccc gacgcctacc aggcgctgcg tgggctgggc
     3661 tttggccagt gccggctgat gctggcggtg cccgaggaat ggcagtggca gggtccggcg
     3721 cagctggccg gtacccgcat cgccaccagc tatccggcca tcctcacgca gtggctggcc
     3781 gagcagggcg tggacgcaca ggtggtcgag ctgtccggtt cggtggaaat cgctccgcgc
     3841 ctgggcaccg ccgacctgat ctgcgatctg gtgtccagcg gcgccacgct gcgcgccaac
     3901 cagttgaccc cggtgcacaa cctgctcgac agcgaagcgg tgctggccgg tgcggtgcgc
     3961 gagccggacg atgcgcgcgc ctcgctgcgc gcgatgctgc tgcgtcgcct cgatggcgtg
     4021 gtgcagcgcc aggaccgcaa gctgctgatg ttccgcgcca gcgaggatcg cgtcgatgcg
     4081 ctggcacagc tgctggctga tgccgaacca ttggtgcggc tgccggccga tggcggcgcg
     4141 ctgcgcctgc agaccatgtg ccccggcccg ttgagctggc agcgcatgga agaactcgag
     4201 cgcgccggtg cgcagggcct gatggtactg agcgtggagc ggtcgctggc atgaaccgtc
     4261 tgatctggtc ccgacttgat gagcccgccc gcagcgcggc attgacccgc ccggtgcagg
     4321 ccgtggcgca gcagacccgc gatgccgtgg ccgcgctgat cgcgcaggtg cgtgcacagg
     4381 gcgacgacgc gctgcgtgcg atcaccgcgc gcttcgatgg tgtcgagctg gcctcgtttg
     4441 aagtttccga agccgaattc gccgctgctg aagccgccgt gcccgccgaa ctgcgccagg
     4501 cgatggtgga cgccgccgag cgcatcgcgc gcttccacgc cgccggcatg ggtaaaggct
     4561 atgcagttga aaccgcgccg ggcgtggtct gtgaacgcat gctgcggccg atcggccgcg
     4621 tcggcctgta tgtgccggcg ggcagcgcgc cgctgccgtc cacggcactg atgctgggcg
     4681 tgccggcaca gctggccggg tgcccgcagg tggtgctgtg cacgccgccg cgtgccgatg
     4741 gcagcgccga tccggcggtg ctggtagccg cccgcctgac cggcgtgcag cgcgtgttca
     4801 agctcggcgg cgcgcaggcg atcgccgcga tggcctatgg caccgccacc atcccggcct
     4861 gcgacaagct gttcgggccg ggtaacagct tcgtcaccga agccaagcag caggtcgcgc
     4921 agggcggcgc cgccgccatc gacatgccgg cgggcccgtc ggaagtgctg gtgattgccg
     4981 atgccggcgc caccccagcg ttcgtcgctg ccgatctgtt gtcgcaggcc gagcacggcc
     5041 cggattcgca ggtgctgctg ctgaccgacg acgcggcgat gctggccgcg gttgaggcgg
     5101 aagtagagcg ccaggtggca ttgctgccgc ggcagcagat cgcgcgccag gcattgtcgg
     5161 cgtcgcggct gatccaggtc gagacgttgg acgaggcctt tgcgatcagc aaccgctatg
     5221 cgcccgagca cctgatcctg gccctgcgcg aaccgcgcga ctggctgggc caggtgcagg
     5281 ccgccggctc ggtgttcctc ggcgactaca ccccggaagc actgggcgac tactgcagtg
     5341 gtaccaacca cgtgctgcct accgccggtg ccgcgcgtgc ctacagtggt gtcagcgtgg
     5401 ccagcttcca gaacctgatc agcgtgcaga gtgccagcgc cgacggcctg gcagcgattg
     5461 gtggctgcgc gcgcatcatc gcccgtgccg aaggactgga tgcgcatgag cgtgcggtgg
     5521 cgctgcgcat ggaggtggcg gcatgagcgc cattgacgat gtgctggcgc tggtgcgccc
     5581 ggatctgcag gccttcgccg gctacagctc ggcgcgcagc gcggcggtgc agggtgaggt
     5641 ctggttgaac gccaacgaat cggcctgggc caatccggcc gatgccgcag gcagcagccg
     5701 gcgctatccg gaaccgcagc cgttggcgct gcgtgagggc ctggcagcgc tgtacggcgt
     5761 gacgccgcag cagctgctgg tcggccgtgg cagtgacgaa gccatcgatc tactggtgcg
     5821 cgccctgtgc gtgccgggtc gcgatggcgt gctggtgacc tcgccggtgt tcggcatgta
     5881 tgccgtctgc gcgcggctgc agggtgcgcc gctgatcgac gtgccgctgg tggacggcga
     5941 ggacggcctg cgcgccgatc tcgatgcggt catccgcacg gcacgggagc agagcgccag
     6001 gctggtcttc ctgtgtgcgc cctccaaccc ggctggcagc gatatgagcc tggacgagat
     6061 cgagcgcgtg gcgactgcac tccgtgggca agcgctggtg gtcgtggacg aggcctacgt
     6121 cgagtacgcg cagcgtgtat ctgcgactac gctgttggcc gcgcatgcca acctggcggt
     6181 gctgcgcacg ttgtccaagg cgcatgcact ggctgcggcg cgcgtcggag ctctcattgc
     6241 cgcaccggat ctgatcgccg tgctgcgccg ttgccaggcg ccgtacccgg tgccgacccc
     6301 atgtgcggaa ctggccgtgc aggccctgca accggctgct ctggcgcgca ccgccgagcg
     6361 cgtggccacg gtcatcggcg agcgtaagcg cctgtttgcc gccttgccag gtctacccgg
     6421 cgtgcgccgt gtttaccgct cggccggcaa ctacctgctg gtccgcttcg ccgacgcgca
     6481 ggccgcattc gacacgttgc tggaagccgg ggtggtggtg cgtgaccagc gcgccgcgcc
     6541 gcagctgggc gacgcgctgc gcatcagcat cggcagcccc gaagacaatg accgcgtgct
     6601 tgcggccctg tcggcgcgga gggccgcggc atgaccccga tcctgttcat cgaccgcgac
     6661 ggcaccctca tcgaggagcc ggccgacttc cagatcgacg cctacgagaa gctgcgcttc
     6721 gtgccgcagg tgattccggc gctgctgaag ctgcgcgacg ccggctacca gttcgtgatc
     6781 gtcaccaacc aggatggcct gggcagcgag agctatccgc gtgccagctt cgagggtccc
     6841 aacgacctga tgctgcagat cttcgaaagc cagggcatca ccttccgtga cgtcctgatc
     6901 gactgcagct ggccgcagga caatgcgccg acccgcaagc cgggcatcgg cctgatgacg
     6961 gcttacctgc aggaccgcag catcgattgg gcgcgttcgg gcatggtcgg cgatcgcatc
     7021 accgacctgc agttcgccga caacctgaac atccgtggct tccagctgcg caccgaacaa
     7081 tttggtggtg agtgggactg gccgggcatc gcccacgccc tggccgatgc gccgcgtacc
     7141 gcagtggtcc agcgcaatac gaaagaaacg aggatccgcg ttgagctgga cctggatcga
     7201 gtcggcgatg cgcgcatctc cacgggcctg ccgttcttcg accacatgct cgaacagatc
     7261 ggaaagcacg gtggcttcgc gctggacatc caggccgagg gcgacctgca catcgacgag
     7321 caccacacca tcgaagacac gggtcttgcc ctggggcagg cgctgcgcga agcactgggc
     7381 gacaaacgcg gcattggccg ctacggcttc actctgccga tggatgaaac gctggccagc
     7441 gccgcgctgg atttcagcgg acgcccgtac ttcgtgttcg agggcgagtt caagcgcgag
     7501 cgggtgggcg acatgccaac cgagctggta ccgcatttct tccgctcgct gtgcgatgcc
     7561 agtggcctga acctcaacct gcaggtgcgc ggcgacaacg atcaccacaa agtggaggcc
     7621 tgcttcaagg ccctggcgcg cgcgttgcgc ccggcactgg cccgccaggg tacggcgttg
     7681 ccgagcacca agggggcgtt gtgagcgacg tcgcgctgat cgatgccggc ggcgccaacc
     7741 tgggctcggt gcgctatgcg ctcgagcgcc tgggggcgac ggtacggctg gtgcgtgatg
     7801 cggacggcct ggtcggcgcg cagcgggtga ttctgccggg cgtgggtgcc gcaggcccgg
     7861 gcatgcagcg cctgcatgcg caggggctgg tggagccgtt gcagcgactg gaggtgccgc
     7921 tgatgggcat ctgcctgggc atgcagctgc tgttcgagcg ttccgaggaa gcgggcgtgg
     7981 agacactggg gctgattccc ggggtagtgc gcaagctggt gccagcctgc ggcatccgcg
     8041 tgccgcacat gggctggaac cgcctgctgc cgctgcgcga atcgctgctg ctgcagggcg
     8101 taccggagcg cgccagcgcc tacttcgtgc acagctatgc cgcgccactc aacacccaca
     8161 ccgtcgccgc ctgcgaccac gggggcctgt tcacggccgt ggtggagcag gggcgctatt
     8221 acggcgcgca gttccatccc gagcgctcgg gcgaaaccgg ttcactgatg ctgcgcaact
     8281 tcctcgaggg cactgctgca tgagcttcat cgtctaccca gcgctggaca tccgtgatgg
     8341 ccgcgtggtg cggctccgcc agggcgacta cgcgcaggag acctcgtatg gcgatgatcc
     8401 attgccgcgc gcgcaggcct tcgccgcgca gggcgcgcag tggatgcacc tggttgacct
     8461 ggatgcggcg cgtgccggtg gctacacgct ggcgccgctg ttggcagcga tccgctcgca
     8521 gacgacgctg caggtgcaga ctggtggagg ggttcgtggc cgcgacgacg tggcacgcat
     8581 tctcgacgcc ggcgccggtc gcgtggtggt cggttcgctg gcggtgcgcc gccccgatga
     8641 ggtggtcgga tggctcgatg agttcggcgc cgagcacatc acgattgcgc ttgacgcacg
     8701 gcaggatgcc cagggccagt ggcagctgcc ggtgcacggc tggaccgaga acgccggggt
     8761 gacgctggat gacctggccc tgcgctacgc gcgcgccggc atgcgccacc tgctgtgcac
     8821 cgatatcgcc cgcgacggca tgctggccgg gccgaacatc gggctgtacg cgcacctctc
     8881 agcgctgttg ccgggcgtgg ccgtgcaggc gtcaggcggc atccgcgacg tggccgatgt
     8941 cggcgaggca cgtgacgccg gctgtggcgg cgccatcctc ggcaaggcct tgctggagca
     9001 gcgcatggac ctggcggagg cgctggcatg ttgagccgcc gcatcattcc ctgcctggat
     9061 gtgcgcgatg ggcgcgtggt caagggcgtg cgcttccgcg atcacgtcga catgggcgac
     9121 atcgccgagc tggcacagcg ctaccgcgac cagggcgccg acgagctggt gttctatgac
     9181 atcggcgcca gccccgaggc acgttcggtg gacgtggcct ggatcgagcg catcgcgcgc
     9241 ctgatcgaca ttccgttctg cgtggccggt ggcatcgaca gcgtggaaac cgcgcgccgc
     9301 gtgctgttcg ccggcgccga caaggtgtcg atcaactcgc cggcgctggg ccgaccgcag
     9361 ctgatcaccg agctggcgga cgagttcggc gtgcagtgcg tagtggttgg tgtcgactcg
     9421 gtacgcgaag ctgacggcca gtggcgggtg cgccgtttca gcggcgaccc ggacaagacc
     9481 caggcggtgc cggtgcgcac cctggactgg atcgtggagg cgcagcagcg aggggccggc
     9541 gaaatcgtgc tgaactgcat ggacagcgat ggcgtgcgcc gtggctacga tatcgcccag
     9601 ctgcagcagg cacgggccct gtgccaggtg ccgctgatcg cctccggggg tgccggtgcg
     9661 atggagcatt tcgccgaggc cttcgaccag gccgacgtcg acggcgcttt ggctgccagt
     9721 gtgttccaca gcggcgccat cgccattccg gaattgaagc gctacctgcg cggacagcag
     9781 atcgaggtgc gggatgtcta ttgaagtaag gccgtcaccg gacgccttgc aggcgctgga
     9841 ctggcgcaag ggcgagggcc tgctgccggc ggtggtgcag gatgccgata ccctgcaggt
     9901 actgatgctg ggctatgtga gcgccgaatc gctggcggcc acgctggcga tcggtcacat
     9961 gaccttcttc agccgcagca agcagcgctt gtggaccaag ggtgagcagt ccggcaacgt
    10021 gctggtggtg cagtcgatcc gtgtcgactg cgacgccgat acgctgctgg tgatggcacg
    10081 tccggcggga ccgacctgcc ataccggtgc cgaaagctgt ttcgaccagg cgccgaagga
    10141 cttcctgggc gggctgggcc agctggtggc gatgcgcgag gcgcagcgcc cgccgggcag
    10201 ctacacgacc agcctgttcg agggcggcat ccgccgtatc gcacagaagg tgggcgagga
    10261 gggcgtggaa accgcactgg cggcggtggc gcaggatgat gaggcgttgt tgggtgaggc
    10321 ctcggatttg ctgtatcacc tgctggtact gctgcgcgcg cgcggcctgt cgctggacga
    10381 tgcgcgggcg gtgctggaaa agcgcc
//
LOCUS       DAOKIP010000142        10342 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.142,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000142 DAOKIP010000000
VERSION     DAOKIP010000142.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 10342)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10342)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10342
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.142"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(5..1459)
                     /locus_tag="QEL58_002878"
     CDS             complement(5..1459)
                     /locus_tag="QEL58_002878"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004136654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SulP family inorganic anion transporter"
                     /protein_id="HDS1677327.1"
                     /translation="MQTSYPLRQQWLGNIRGDLLSGIVVALALIPEAIAFSLIAGVDP
                     KVGLYAAFSIAVITAIAGGRPGMISAATGAMALVMVDLVKDHGLQYLFAASILAGLLQ
                     VLAGVFKLGSLMRFVSRSVITGFVNALAILIFLAQMPELIGRGPTVYVLCAAALAIIY
                     LLPRITRAVPSPLVAIVVLTAVVIGFGVDVRSVGDMGQLPDSLPHFLLPDVPLTWETL
                     RILLPVSATLAVVGLLESMMTLQIVEDITETPSERNRECVGQGVANTVTGFLGGMAGC
                     AMIGQSVINVTSGGRGRLSCLVAGVVLLVLVVYGSELVRQIPMAALVAVMIMVSIGTF
                     SWRSLRDLRTHPRSSSAVMLLTVVVTVATHDLAKGVLSGVLLSALFFARKVGRMLDVQ
                     REDTGDTQVYRVRGQLFFASGGQLGAAFDYQHVAPKVQIDLRDAHLWDLTAVAALERA
                     QEKLAAHGAEVTVVGLNAASQTLIEQVGGARSGH"
     gene            1667..2647
                     /locus_tag="QEL58_002879"
     CDS             1667..2647
                     /locus_tag="QEL58_002879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019337793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation transporter"
                     /protein_id="HDS1677328.1"
                     /translation="MAPLYNPGMAADRPHFFDPATEQGVLRLSIAGALLLAMAAVVFG
                     LLANSSLIIFDGIYGLIDVVMTWLSLLVARLIALSTNTDALQSRLNQRFTMGFWHLEP
                     IVLGVSGTLMIGAALYALVNAVDALMSGGRHIALGPAIIFAGLSLVAESALGWFVLRA
                     NRRIGSEFIALDAKNWVVAASMSACYMVAFLGGVLVQGTTWAWVGPYIDPAILAFVCV
                     LVMIAPLGTVRRALAGILLVTPPELQAHVDAVARAIVAKHGFVEHRSYVAQVGRGEQI
                     ELFFVVPENDPPRPLVEWDQLRDEIGDALGEPSPDRWLTIMFTTDREWTL"
     gene            2758..3183
                     /locus_tag="QEL58_002880"
     CDS             2758..3183
                     /locus_tag="QEL58_002880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005420647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="organic hydroperoxide resistance protein"
                     /protein_id="HDS1677329.1"
                     /translation="MSIEKVLYTAQATSTGGREGRSVSSDNVLDIQLSTPRELGGAGG
                     PGTNPEQLFAAGYSACFLGALKFVAGQAKVALPADTTVTGKVGIGQIPTGFGIEAELT
                     INVPGVPREQVEELVQKAHIVCPYSNATRGNIDVTLVVA"
     gene            complement(3330..4220)
                     /gene="mmsB"
                     /locus_tag="QEL58_002881"
     CDS             complement(3330..4220)
                     /gene="mmsB"
                     /locus_tag="QEL58_002881"
                     /EC_number="1.1.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005407687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyisobutyrate dehydrogenase"
                     /protein_id="HDS1677330.1"
                     /translation="MSRIAFIGLGNMGGPMAANLVKNGHTVRVFDLVPAAVQAAVDAG
                     ASAASTARDTLADAEVVISMLPASRHVEGVYLGDDGILAAIPAGALVIDCSTIAPASA
                     RKVSEAAAARGLQMIDAPVSGGTAGAQAGTLTFIVGGEEDALERARPVLQAMGKNIFH
                     VGASGAGQVAKLCNNMALGVIMAVTGEAIALGVAHGLDPKVLSQMMAVSTGRSWATEV
                     CNPWPGVLENAPASRGYSGGFGSDLMLKDMGLAVEAAMSVGASIPLGEVARNLYSMNH
                     QAGRGKLDFSSVVQLITSEK"
     gene            complement(4217..5392)
                     /locus_tag="QEL58_002882"
     CDS             complement(4217..5392)
                     /locus_tag="QEL58_002882"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014645593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HDS1677331.1"
                     /translation="MSTDTVADEAPVLFEERVAGNGARIGIATLNAPRTLNGFSLPMA
                     HLLLKQLNAWADDDGIAVVVLQGAGEKAFCAGGDLHSLYKSMVAFRDAGRRDIRENDY
                     AAEFFDVEYRVDYLIHTYAKPILCWGHGIVMGGGIGLMSGASHRVVSERSKLAFPEIT
                     VGLFPDVGGSWLLPCVPGKGGLFLALTGALLNPGDAIYAGLADVHVAEERRSAVFDAL
                     LQVAWSGDATHNHERLSQLLQSHASDAVTGPLLAHAAQVDALCEGDDLSAIIDRISSL
                     QTDDAWLQAAQKTLAAGAPGSARLAFELQRRSAGQDLASVYRLEYITALHCAAHGDFA
                     EGIRALLIDKDRNPQWNPATLAEATTAWAETFFASPWADAAHPLADLGTPLAERSLA"
     gene            complement(5389..6186)
                     /locus_tag="QEL58_002883"
     CDS             complement(5389..6186)
                     /locus_tag="QEL58_002883"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005420654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase"
                     /protein_id="HDS1677332.1"
                     /translation="MKDWRTQEHVGLKVEVDGHTAVVTLHNPPAHTWTVHSLSALRDL
                     VGALNADREIYALVITGDGEKFFSAGADLNQFASGDKAAAREAARRFGEAFEALSGFR
                     GVSIAAINGYAMGGGLECALACDLRIIEEHAQVALPEATVGLLPCAGGTQNLPRLVGE
                     GWAKRMILLGERINADTALRIGLAEEKVGKGEAKALALEWANKAGKQSPTSIAACKTL
                     VQSTRSGTHASALVAEREAFVDLFDTADQVEGVTAFLEKRAAQWKNA"
     gene            complement(6183..7349)
                     /locus_tag="QEL58_002884"
     CDS             complement(6183..7349)
                     /locus_tag="QEL58_002884"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008267675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HDS1677333.1"
                     /translation="MSHSMTTELEEAQQAYREAARDFAQAELAPHAARWDAEGIFPRE
                     AIAKAGELGFCGLYMDPEVGGSGLSRLDAAVVIEELANVDPSTAAYISIHNMASWMVS
                     KWGQPALRDAWGQDLAAGLKLASYCLTEPGAGSDAASLKTTAVRDGDHFVLNGSKAFI
                     SGAGATELLVVMARTGGAGAGGVSAIAVPSDLPGVSFGRKEEKMGWNSQPTRGITFEN
                     VRVPVSHLLGEEGGGFKLAMKGLDGGRINIAACSLGAAQGALDAARRYMGERRQFGKA
                     LAEFQALQFKLADMAIELVAARQMVHTAARKLDAGAGDANVWCAMAKRFATDAGFNVC
                     NEALQIHGGYGYIREYPIERLLRDCRVHQILEGTNEIMRVIVARHLLNTEEELR"
     gene            complement(7364..8869)
                     /locus_tag="QEL58_002885"
     CDS             complement(7364..8869)
                     /locus_tag="QEL58_002885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017155588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-acylating methylmalonate-semialdehyde
                     dehydrogenase"
                     /protein_id="HDS1677334.1"
                     /translation="MTVAAPRIRMLIDGQFVESATSHWQDVINPATQDVLAQVPFATT
                     GEVDAAVAAAKEAFKTWRKTPIGTRARIFLKYQQLIRENMSELAHILTAEQGKTLPDA
                     EGDVFRGLEVVEHAAAIGNLQLGELANNVANGVDTYTIMQPLGVCAGITPFNFPAMIP
                     LWMFPMAIATGNTFILKPSEQDPMVTMRLVELALEAGIPKGVLNVVHGGEEVVNAICD
                     HPDIKAVSFVGSTRVGTHVYNRASLAGKRVQCMMGAKNHAVVLPDANKEQTLNAMVGA
                     AFGAAGQRCMAASTLVLVGEARGWVQDLVTKAQTLKVSGGTVSGTDVGPVISCSARER
                     VEGLIASGVEQGAKLVLDGRNPQVDGFEKGNFVGPTIFAGVTTDMRIYQEEIFGPVLV
                     ILEAETLEEAIAMVNSNPNGNGTALFTQSGAAARRFQEDIDVGQVGINVPIPVPVPLF
                     SFTGSRASKLGDLGPYGKQVVLFYTQTKTVTARWFDDETLSHGVNTTISLK"
     gene            8985..>10342
                     /locus_tag="QEL58_002886"
     CDS             8985..>10342
                     /locus_tag="QEL58_002886"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014035615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2083 domain-containing protein"
                     /protein_id="HDS1677335.1"
                     /translation="MNYSAPQRQLGLRLLRLREQRGYSQVDLARALGLSASYLNQIER
                     NKRPLTPAVQKKLGEVLGDVSALFDDDEPAALQEALGETLRDLGLAEVSATELRALAG
                     NLPQVSRALLDLHRRHLALREHAAALEFQLGEPGAGSTLPAGDQVREFFNRMHNHIPE
                     LDELAERLFAEWGLSPGHVAPRLRQLLADRHGVLVEVAALQAGREKRQFDAGARRLWL
                     PDYLEPGQQAFQMAAELALHGYLPQIDAVIARAGFHDDARIAQARIGLSNYFAGALVM
                     PYMRFLRAAEASSYDIELLAHQFGVGFEAVCHRLSTLARRSAPGLPFFFIRVDRAGNV
                     SKRHSATDFHFSQVGGSCPLWIVYEAFNQPGRILTQTARMPDGRRHFWLARQVSSGPV
                     GHGQPRKTFAVALGCDLQHAERLVYSLGLDVQSPGNSVSIGPGCRVCPREDCMQRAFA
                     QLP"
BASE COUNT         1652 a         3454 c         3523 g         1713 t
ORIGIN      
        1 ccgatcaatg cccgctacgc gcgccaccca cctgctcgat caacgtctgg ctggccgcat
       61 tgagccccac caccgttacc tcggcgccat gcgcggccag tttttcctga gcgcgttcca
      121 gcgcggccac ggcggtcagg tcccagaggt gggcatcgcg cagatcgatc tgcaccttcg
      181 gcgctacatg ctgatagtcg aacgccgcac ccagctggcc gcccgaagcg aagaacagct
      241 ggccacgcac gcggtagacc tgcgtgtcac cggtatcttc gcgctgcacg tccagcatgc
      301 ggccaacctt gcgggcgaag aacagcgccg acagcagcac gccgctgagc acgcccttgg
      361 ccaggtcgtg ggtggccacg gtgaccacca cggtcagcag catgacagcg gaggaactgc
      421 gcggatgcgt gcgcaggtcg cgcagcgagc gccagctgaa ggtgccgatg ctgaccatga
      481 tcatcaccgc caccagcgcc gccattggaa tctgccgcac cagttcgctg ccgtacacca
      541 ccagcaccag caacaccacg ccagccacca ggcaggacag gcgcccgcgg ccgccggagg
      601 tcacgttgat gaccgactgg ccgatcatcg cgcagccggc catgccgcca aggaagccgg
      661 tgaccgtgtt ggccacgccc tggccgacgc attcgcggtt gcgctcgctg ggcgtttcgg
      721 tgatgtcttc gacgatctgc agggtcatca tcgattcgag caggccgacc accgccagcg
      781 tggctgacac cggcagcagg atgcgcaacg tttcccaggt aagcggaaca tccggcagca
      841 ggaagtgcgg caggctgtca ggcagctggc ccatgtcgcc cacgctgcgc acgtccacgc
      901 cgaagccgat caccacagcg gtgagcacga cgatggccac cagcggtgat ggcaccgcac
      961 gggtaatgcg cggcagcagg tagatgatcg ccagtgcggc ggcgcacagc acgtacacgg
     1021 tggggccgcg gccgatcagc tcgggcatct gtgccaggaa gatcaggatg gccagtgcgt
     1081 tgacgaagcc ggtgatgacc gagcgcgaga cgaagcgcat cagcgatccg agcttgaaca
     1141 ccccggccag cacctgcagc aggccggcca ggatgctggc ggcaaacaga tactgcaggc
     1201 cgtggtcctt caccaggtcg accatcacca gcgccatggc gccggtggca gcggagatca
     1261 tgcccgggcg gccaccggcg atggcggtga tcaccgcgat cgagaacgcg gcgtacaggc
     1321 cgaccttggg gtcgacgcca gcgatgagcg agaaggcgat ggcctcggga atcagggcca
     1381 gggcgacgac gatgcccgac agcaggtcgc cacggatgtt gccgagccat tgctggcgca
     1441 gggggtagga cgtttgcatg ggaaaactcc gcgcacacgc gggcgtggcc acgtggcgct
     1501 gcagtggaaa gacacgggtt cctgagccgg gcgggccggc tgccgatgtg cggcaagggt
     1561 cagggtggcg tgatcactgc agggcggggt cgatgcgtgg gaggggcgca gtctacgcca
     1621 ctgggaccat cggggacagc atcgtcgcct tcgacggcag cgcagcatgg ctccgctcta
     1681 caatccaggc atggccgccg accgaccgca tttcttcgac cccgccaccg aacagggcgt
     1741 gctgcgcctg tcgattgccg gtgcactgct gctggcaatg gccgcggtgg tgttcggcct
     1801 gttggccaat tcctcgttga tcatcttcga cggcatctac ggcctgatcg acgtggtcat
     1861 gacctggctg tcgctgctgg tcgcgcggct gatcgcactg tccaccaaca ccgatgcgct
     1921 gcaatcgcgg ctcaaccagc gtttcaccat gggcttctgg cacctggagc cgatcgtgct
     1981 gggggtcagc ggcacgctga tgatcggcgc ggcgctgtat gcgctggtca atgcggtgga
     2041 tgcgctgatg tccggtggcc gccacatcgc gctggggccg gcgatcatct ttgccggcct
     2101 gtcactggtg gccgagagcg cattgggctg gttcgtgctg cgcgccaatc gccgcatcgg
     2161 atcggagttc atcgcgctgg atgcaaagaa ctgggtggtg gcggcgagca tgtcggcctg
     2221 ctacatggtg gccttcctcg gtggcgtgct ggtgcagggc acgacgtggg cctgggtcgg
     2281 cccttacatc gacccggcca tcctggcctt cgtctgtgtg ctggtgatga tcgcgccgct
     2341 gggtaccgtg cgccgggcgc tggccggcat cctgctggtc accccgccgg aactgcaggc
     2401 gcacgtggat gcggtggccc gcgcgatcgt ggcgaagcat ggcttcgtcg agcaccgcag
     2461 ctacgtggca caggtgggcc gtggcgagca gatcgagctg ttcttcgtgg tgccggaaaa
     2521 cgacccgcca cggccgctgg tggaatggga ccagctgcgt gacgagatcg gcgacgcgct
     2581 gggcgagccc tcgccggacc gctggctgac catcatgttc accaccgacc gcgagtggac
     2641 gctctaggcc ggcaggacga tcgatcaaat tttgcggacg agctgtcacc cagcgtcctt
     2701 ggaaaccggg caaagtaggc tccaacgcaa caccacccac cgaccaggag catcccgatg
     2761 tccatcgaaa aggttctgta caccgcccag gccacctcca ccggcggccg cgaaggccgt
     2821 tccgtctcct ccgacaacgt gctggacatc cagctgtcga ccccgcgcga gctgggcggc
     2881 gccggcggcc cgggcaccaa cccggagcag ctgttcgcgg ccggctattc ggcctgcttc
     2941 ctgggcgcgc tgaagttcgt ggccggccag gccaaggtcg cgctgccggc cgacaccacc
     3001 gtcaccggca aggtgggcat cggccagatc ccgaccggtt tcggcatcga ggccgagctg
     3061 accatcaacg tgccgggcgt gccgcgcgag caggtggaag aactggtgca gaaggcgcac
     3121 atcgtctgcc cgtactccaa cgccacccgc ggcaacatcg acgtgacgct ggtcgttgcc
     3181 tgatgtggtg atgccggcca gcggccggca ccagccacgc caaggaaaaa aaatgggcgg
     3241 atgccggtcg aaaccgggca tccgcccatc ccaccttcgt tgtcccctag ggggcatgag
     3301 gttgccggcc agcggccggc actaccaggt cacttctcgc tcgtaatgag ctgcacgacg
     3361 ctggagaaat ccagcttgcc gcggccggcc tggtgattca tcgagtacag gttgcgggcc
     3421 acttcgccca gcgggatcga ggcgccgaca ctcatcgccg cttccacggc caggcccatg
     3481 tccttcagca tcaggtcgct gccgaagccg ccgctgtagc cacgcgaggc cggcgcattt
     3541 tccagcacgc ccggccacgg gttgcacact tcggtggccc agctgcggcc ggtgctgacc
     3601 gccatcatct gcgacagcac cttcgggtcc agcccatgcg ccacgccgag ggcgatggct
     3661 tcgccggtga ccgccatgat cacgcccagc gccatgttgt tgcacagctt ggcgacctgg
     3721 ccggcaccgc tggcgccaac gtggaagatg ttcttgccca tcgcctgcag caccgggcgc
     3781 gcgcgttcca gcgcgtcctc ttcgccgccg acgatgaagg tcagggtgcc ggcctgggca
     3841 ccggcggtac cgccggacac cggcgcgtcg atcatctgca ggccacgcgc ggcagcggct
     3901 tcagacacct tgcgggcact ggccggggca atggtgctgc agtcgatgac cagcgcaccg
     3961 gccgggatgg cggcgaggat gccgtcgtcg cccaggtaca cgccttcgac gtgacggctg
     4021 gccggcagca tcgagatcac cacctcggca tcggccaggg tgtcacgcgc ggtggatgcg
     4081 gcgctggcgc cggcatcgac agcggcctgc accgcggccg ggaccagatc gaacacgcgc
     4141 acagtgtggc cgttcttgac cagattggcg gccatcgggc cacccatgtt gcccaacccg
     4201 atgaatgcaa tgcggctcat gcaaggctcc tttcagcaag gggagtaccc aggtcggcca
     4261 gcggatgcgc ggcatcggcc cagggggaag cgaagaaggt ctcggcccat gcggtggtgg
     4321 cttcggccag ggtggccggg ttccactgcg ggttgcggtc cttgtcgatc agcagggcgc
     4381 ggatgccttc ggcaaaatcg ccgtgggcgg cgcaatgcag cgcggtgatg tattccagcc
     4441 ggtagacgct ggccaggtcc tggccggcgc tgcggcgctg cagttcgaac gccaaccgcg
     4501 ccgaaccggg tgcaccggcg gcgagggtct tctgtgccgc ctgcaaccac gcatcgtcgg
     4561 tctgcaggct gctgatccgg tcaatgatgg cggacaggtc atcgccttcg cacagcgcgt
     4621 cgacctgcgc cgcgtgggcc agcagcgggc cggtaacggc gtcgctggca tgcgattgca
     4681 gcagctggct caggcgctcg tggttgtgcg tggcatcgcc cgaccaggcc acctgcagca
     4741 gcgcatcgaa caccgcgctg cggcgttctt cggccacgtg cacgtcggcc aggccggcgt
     4801 agatggcatc gcccggattc agcagcgcgc cggtcagagc caggaacagg cccccttttc
     4861 ccggtacgca cggcagcagc cagctgccac cgacatcggg gaacaggccc acggtgattt
     4921 ccgggaacgc cagcttggag cgctcgctga ccacgcggtg gctggcgccg gacatcaggc
     4981 cgatgccgcc gcccatcacg atgccatggc cccagcacag gatcggcttg gcgtaggtgt
     5041 ggatgagata gtcgacgcgg tattcgacgt cgaagaactc ggcggcgtag tcgttctcgc
     5101 ggatgtcgcg gcggccagcg tcgcggaagg cgaccatgct cttgtacagg ctgtgcaggt
     5161 caccgccggc acagaacgcc ttttcgccag cgccctgcag caccaccacg gcgatgccgt
     5221 cgtcgtcggc ccaggcattg agctgcttca gcagcaggtg cgccatcggc agcgagaaac
     5281 cgttgagcgt acgcggcgca ttgagcgtgg cgatgccgat gcgcgcgccg ttgccggcca
     5341 cgcgctcttc gaacagcacc ggtgcttcat cggcaacggt gtcggtgctc atgcgttctt
     5401 ccactgcgcg gcgcgctttt ccaggaacgc ggtcacgccc tcgacctggt cagcggtgtc
     5461 gaacaggtcg acgaaggctt cgcgctcggc caccagtgcc gaggcatggg tgccgctgcg
     5521 ggtggactgc accagggtct tgcaggcggc gatgctggtc gggctctgct tgccggcctt
     5581 gttcgcccac tccagtgcca gcgccttggc ctcgcccttg ccgacctttt cttcggccag
     5641 gccaatgcgc agtgcggtgt cggcgttgat gcgctcgccc agcaggatca tgcgcttggc
     5701 ccaaccctca ccgaccaggc gcggcaggtt ctgggtgccg ccggcgcacg gcagcaggcc
     5761 gacggtggcc tccggcagcg cgacctgggc gtgctcttcg atgatgcgca ggtcgcaggc
     5821 cagcgcgcat tccaggccgc cgcccatggc gtagccgttg atggcggcga tcgacacgcc
     5881 acggaacccg gacagcgctt cgaaggcttc accgaaacgg cgtgcggctt cgcgtgcggc
     5941 ggccttgtcg cccgaggcga actggttgag atcggcgccg gcggagaaga acttctcgcc
     6001 gtcgccggtg atcaccagcg cgtagatctc gcggtccgcg ttgagcgcgc ccaccaggtc
     6061 gcgcagcgcc gacaggctgt gtacggtcca ggtatgcgcg ggcgggttgt gcagggtgac
     6121 cacggcggtg tggccatcca cctcgacctt caggcccaca tgctcctggg tacgccaatc
     6181 cttcatcgca gttcctcttc ggtgttgagc aggtggcggg caacgatcac ccgcatgatc
     6241 tcgttggtgc cttccaggat ctggtgcacg cggcagtcac gcagcaggcg ctcgatcggg
     6301 tattcgcgga tgtagccgta gccaccgtgg atctgcagcg cttcgttgca gacgttgaaa
     6361 ccggcatcgg tggcgaaacg cttggccatc gcgcaccaca cgttggcatc gccggcaccg
     6421 gcatcgagct tgcgcgcggc ggtgtgcacc atctgccgtg cggcaaccag ttcgatggcc
     6481 atgtcggcca gcttgaactg cagcgcctgg aactcggcca gcgccttgcc gaactggcgg
     6541 cgctcgccca tgtagcggcg tgcggcatcc agcgcgccct gcgccgcgcc cagcgagcag
     6601 gcggcgatgt tgatgcggcc accgtccagc cccttcatcg ccagcttgaa gccgccgcct
     6661 tcctctccca gaaggtggct gaccggcacg cggacgtttt caaaggtgat gccacgggtg
     6721 ggctggctgt tccagcccat cttctcttcc ttgcggccga agctgacgcc cggcaggtcg
     6781 gacggcaccg cgatcgcgct gacaccaccg gcaccggcac cgccagtacg cgccatcacc
     6841 accagcagct cggtggcacc ggcgccggag atgaaggcct tggagccgtt cagcacgaag
     6901 tggtcgccat cgcgcacagc ggtggtcttc agcgaggccg cgtcggaacc ggcacccggt
     6961 tcggtcaggc agtaggaggc cagcttgagg ccggcggcca gatcctggcc ccatgcatcg
     7021 cgcagtgccg gctggcccca cttggacacc atccacgagg ccatgttgtg gatgctgatg
     7081 tacgctgcgg tcgacggatc gacgttggcg agctcctcga tgacgacggc ggcgtccagt
     7141 cggctcaggc cgctgccgcc cacttccggg tccatgtaca ggccgcagaa gcccagttca
     7201 ccggccttgg cgatcgcctc gcgcggaaag atgccctccg catcccatcg cgcggcgtgc
     7261 ggcgccagtt cggcctgtgc gaagtcgcgc gccgcctcgc ggtacgcctg ctgcgcttct
     7321 tccagttccg tcgtcatcga gtggctcatg gctgctcctg cggttacttc aggctgatcg
     7381 tggtgttgac gccatggctc agcgtttcgt catcgaacca gcgcgcggtg accgtcttgg
     7441 tctgggtgta gaacagcacc acctgcttgc cgtacgggcc caggtcgccc agcttggagg
     7501 cgcgcgaacc ggtgaacgag aacagcggca ccggcaccgg gatcggcacg ttgatgccga
     7561 cctggccgac gtcgatgtct tcctggaacc tgcgcgcggc ggcgccggac tgggtgaaca
     7621 gggcggtgcc gttgccgttc gggttgctgt tgaccatggc gatggcctct tccagcgttt
     7681 ccgcttcgag gatgaccagc accggcccga agatttcttc ctggtagatg cgcatgtcgg
     7741 tggtgacacc ggcaaagatg gtcgggccga cgaagttgcc cttctcgaag ccatccacct
     7801 gcgggttgcg gccgtcgagc accagcttgg cgccctgctc cacgcccgag gcgatcaggc
     7861 cttccacgcg ctcgcgggcg ctgcaggaaa tgaccgggcc gacatcggtg ccggacacgg
     7921 tgccgccgct gaccttcagg gtctgggcct tggtgaccag atcctgcacc cagccgcggg
     7981 cctcaccgac cagcaccagg gtggaggcgg ccatgcaacg ctggccggcg gcaccgaagg
     8041 cggcgccgac catcgcattg agggtctgtt ccttgttggc gtccggcagc accacggcgt
     8101 ggttcttggc gcccatcatg cactgcacgc gcttgccggc cagcgaggcg cggttgtaga
     8161 cgtgggtacc gacgcgggtg gaaccgacga acgacacggc cttgatgtcc gggtggtcgc
     8221 agatcgcgtt gaccacttcc tcgccgccgt ggacgacgtt cagcacgccc ttcggaatgc
     8281 ccgcttccag cgcaagctcg accaggcgca tggtcaccat cgggtcctgc tcggacggct
     8341 tgaggatgaa ggtgttgccc gttgcaatcg ccatcgggaa catccacagc gggatcatcg
     8401 ccgggaagtt gaacggggtg atgccggcgc acacgcccag cggctgcatg atcgtgtagg
     8461 tgtccacgcc attggccacg ttgttggcca gttcgcccag ctgcaggttg ccgatggcag
     8521 cggcatgctc gaccacttcc aggccacgga acacatcgcc ttcggcgtcg ggcagggtct
     8581 tgccctgttc ggcggtgagg atgtgggcca gctcgctcat gttctcgcgg atcagctgct
     8641 ggtacttcag gaagatgcgc gcgcgggtgc cgatcggggt cttgcgccag gtcttgaagg
     8701 cttccttggc ggcggcgacg gcggcgtcca cttcgccggt ggtggcgaac ggcacctggg
     8761 ccagcacgtc ctgggtggcc ggattgatca cgtcctgcca gtgggaggtg gccgattcaa
     8821 cgaactggcc atcgatcagc atgcggatac ggggcgctgc aacagtcatg acgacaatcc
     8881 cacggggtgc gaaagatgct tggcattatt cacagcaccc acctcgattt ccgggctgaa
     8941 tccgcttaat ctggccaaca cgccagacga ttcatgttaa ttctgtgaat tattcagccc
     9001 ctcagcgaca actcggcctg cgcctgctgc gcctgcgtga acagcgcggc tacagccagg
     9061 tagacctggc acgggcgctg gggctgtcgg ccagctacct gaaccagatc gagcgcaaca
     9121 agcgcccgct gaccccggcc gtacagaaaa agctgggcga ggtactgggc gacgtttccg
     9181 cgctgttcga cgacgatgag cccgccgcgc tgcaggaagc gctgggcgaa accctgcgcg
     9241 acctgggcct ggccgaggtg agcgcgaccg agctgcgcgc cctggccggc aacctgccgc
     9301 aggtcagccg cgcgcttctg gacctgcacc gccgccacct ggccctgcgc gagcatgcgg
     9361 cggcactgga gttccagctg ggcgagcccg gtgctggcag caccctgccg gccggtgacc
     9421 aggtgcgcga gttcttcaac cgcatgcaca accacattcc cgaactggac gaactggccg
     9481 agcgcctgtt cgccgaatgg ggactgtccc ctgggcacgt ggcaccgcgc ctgcgccagc
     9541 tgctggccga ccgccatggc gtgctggtgg aagtggccgc actgcaggcc gggcgcgaga
     9601 agcgccagtt cgatgccggc gcgcggcggc tgtggttgcc cgattacctg gagccgggcc
     9661 agcaggcgtt ccagatggcg gccgagctgg cgctgcacgg ttacctgccg cagatcgatg
     9721 cggtgatcgc gcgcgcgggc ttccacgatg acgcgcgcat cgcgcaggcg cgcatcggcc
     9781 tgtcgaatta cttcgccggg gcgctggtga tgccgtacat gcgcttcctg cgtgcggccg
     9841 aggccagcag ctacgacatc gaactgctgg cgcatcagtt cggcgtcggt tttgaggcgg
     9901 tgtgccatcg cttgagtacg ctggcgcggc gcagtgcgcc cgggctgccg ttcttcttca
     9961 tccgcgtgga ccgcgcgggc aatgtctcca agcggcattc ggccaccgat ttccatttct
    10021 cgcaggtggg cggctcgtgc ccgctgtgga tcgtctacga ggcgttcaac cagccagggc
    10081 gcatcctcac ccagaccgca cgcatgcccg atggccgccg acatttctgg ctggcacggc
    10141 aggtcagcag cgggccggtg ggccatggcc aaccgcgcaa gacgttcgcg gtggcgctgg
    10201 gctgcgacct gcagcatgcc gagcggctgg tgtattcgct ggggctggat gtgcagagcc
    10261 cgggcaattc ggtgtcgatc ggcccggggt gccgggtgtg cccgcgcgag gactgcatgc
    10321 agcgcgcgtt cgcgcagttg cc
//
LOCUS       DAOKIP010000143        10269 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.143,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000143 DAOKIP010000000
VERSION     DAOKIP010000143.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 10269)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10269)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10269
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.143"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(325..861)
                     /locus_tag="QEL58_002887"
     CDS             complement(325..861)
                     /locus_tag="QEL58_002887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b"
                     /protein_id="HDS1677336.1"
                     /translation="MSTGNGHFNLLARVLHWSMALMIIAMLFIGVTMVASLHLRPVLI
                     DLHRPLGIAILLLVLLRLYNRLRHRPPPLPADLPVWQVMAAKASHWMLYALMLAMPLI
                     GWAMLSAGGYPIVLWGGLHLPPIVPHTPALYAALRNAHSLLAYVLFATVLMHVGAALF
                     HLWVRRDGVFQAMARGKD"
     gene            complement(858..1961)
                     /locus_tag="QEL58_002888"
     CDS             complement(858..1961)
                     /locus_tag="QEL58_002888"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="catalase family peroxidase"
                     /protein_id="HDS1677337.1"
                     /translation="MSLFRYTRAGQAPGAPRRHSPLLWIALIALILGAVALTFAWLAG
                     WIGNRLTAQRFTDTIEATGPAHPGFRRAHSKGICVSGWFEPSAQAPTLSSARVFSQPR
                     VPVMGRLSIGGGDPYGADNTARVRSIAVQMVSDDGQEWRMAMNSFPFFAVPDAEAFFE
                     QTRASIPDPATGKPDPQKMAAVLAKYPSAQAFQQWAKTAPWTSSWADTTFNSVNSFWF
                     TNAQGQKRAVRWRWQPQAPVVEMDAETRKQASVDFLSQELQQRLASGPVRWNLVVSTA
                     EPGDAIDDPSVAWPESREQVVAGVLSLDRMQSQEEGACGQINFDPLILPSGVRGSDDP
                     ILAARSAVYSQSFNRRERERASGNVEQPKEAAR"
     gene            complement(2097..3464)
                     /locus_tag="QEL58_002889"
     CDS             complement(2097..3464)
                     /locus_tag="QEL58_002889"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004137823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M17 family metallopeptidase"
                     /protein_id="HDS1677338.1"
                     /translation="MSEITGFTTDATAALPLYVLDREQFAAWKDGQPAATQAWLASQG
                     FTAGAFSTALLPGADGLAGAVIGVGDRADAYSYSHAPHALPEGSVWQLASELPAAEQA
                     LMQLGWGLGSYRFDRYRKRHRAPAQLVATPTGEAADLITASLRVRDWVNTPTEDMGPQ
                     QLEDAARALADAHGAEVEAITGDALLKQNFPAIHAVGRASHRAPRLVVLRWGKDTDPA
                     LVLVGKGVCFDTGGLDIKPADGMRNMKKDMGGAAHALALAGLVMARGLPVRLTLLVPA
                     VENAIGPDAFRPGEVIATRKGLSVEIDNTDAEGRVILCDALTFASEQKPDLVLDFATL
                     TGAARIALGPDLPALFSNDDSVAQQWLQAGDATRDPVWRMPLWRPYLRYLTSGIADLA
                     NAGSRMAGSVTAALYLERFLEDGQRWAHLDVYAWNDGERPGRPAGGEALALRSAWAML
                     KARYS"
     gene            complement(3468..4187)
                     /locus_tag="QEL58_002890"
     CDS             complement(3468..4187)
                     /locus_tag="QEL58_002890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IA family hydrolase"
                     /protein_id="HDS1677339.1"
                     /translation="MNFPVQAITLDLDDTLWPFAPIGARIDLVLHEWMREHSPATAAM
                     YPVAAMRELRERLYHAHPHLHHDLSALRRLTLHEALHGSGASLDLLEPAYEVFYAARN
                     QVECYPDAIEALARIAARVPVAALSNGNADLERIGLAHHFAFQLGAREHGAAKPEASI
                     FHAACNRLGVAPAQVLHVGDHAEMDVAGAIAAGLRGCWINREAATWTHPQLQPDLQFD
                     TLTGLADWLDANLDAAAPRSI"
     gene            complement(4219..5328)
                     /locus_tag="QEL58_002891"
     CDS             complement(4219..5328)
                     /locus_tag="QEL58_002891"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019185545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HDS1677340.1"
                     /translation="MSEPLLSPSAPGPELPEAPLPPPSRPRGPMSLVVLATLAVGYTL
                     WAAQDIILPVLLAVFFALVGNPILRLLQKLWIPRALGALLVLGAGLGVTGALAVQLIG
                     PAMEWAQEAPQQLRKVARQVQDLTKPVQQANQAAENFARVAGGDSNRKVQVIRTQLDD
                     PYRMLTRAPRLAASVLAVVLLTLFFMIYGQNLQRAAIALFPNRQQQRFTSDILRSIER
                     EVSRYVLTISVINTLVGLVFAGVLMLFGISLQDALLWGTVAALLNFAPYVGPLIGVAL
                     MLLMGFVEFSDPLQALLPAAAYLALHTVEGQVVTPIVLGRRMKLSPLVLILALMVFGW
                     AWGMIGLLLAVPLLVCIKLVLARLDGMQGWARLLE"
     gene            complement(5396..5851)
                     /locus_tag="QEL58_002892"
     CDS             complement(5396..5851)
                     /locus_tag="QEL58_002892"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005420550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein sip-5"
                     /protein_id="HDS1677341.1"
                     /translation="MKFGALQRRVKRCEQVVTVRLVETQDHWSTLSQVWRQGWSPLRI
                     VVVGLAGGFIAGKLEVPGKVNGARWLQMVGSVSNLFASAQAAFATAMAAQAAATADDA
                     AEEADDASEQAQAAASASAARPAPAAQPAAEPELREPRPAEAATELSER"
     gene            complement(5848..6318)
                     /locus_tag="QEL58_002893"
     CDS             complement(5848..6318)
                     /locus_tag="QEL58_002893"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004137827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage holin family protein"
                     /protein_id="HDS1677342.1"
                     /translation="MSEDNAQAPDPAATPPLDESIRQVGAAGRAAADSAKHSLRSLRR
                     LASADFALARSAFGRALAWAGVAIVFGASAWLLMAATLIALLQSWGLSWLQALLITSL
                     LSLAVTGYAIWRVSYFFHHTGMHATRRQLSRLGLFDEPSEDDPDADVQLPEGKP"
     gene            complement(6327..6692)
                     /locus_tag="QEL58_002894"
     CDS             complement(6327..6692)
                     /locus_tag="QEL58_002894"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010486932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677343.1"
                     /translation="MSPTNTENLKEHLGEAGSHLKQAATAAGGAIKGATGAATDELRI
                     GKANVKAELSDSALSGLAAAEFGGAAAKEQVDALMDKGKDLIDSAAELIRERPLASFG
                     VAFAAGWIIAKLARGSSDK"
     gene            complement(6794..8227)
                     /locus_tag="QEL58_002895"
     CDS             complement(6794..8227)
                     /locus_tag="QEL58_002895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Do family serine endopeptidase"
                     /protein_id="HDS1677344.1"
                     /translation="MRPLPTLLTLAIAAAFGGFVATGLNAHLDNRADAAPLPAVLPTT
                     AALPASVAGQAVPSLAPMLEKAMPAVVSVNTKQVVRVRNPFFNDPFFRRLFPDIPQER
                     INESLGSGVIIDAKEGLVLTNHHVIDNADDVQVTLADGRTVKAEFLGSDRDTDIALIR
                     IPAQNLTDIKLGNSDQLRVGDFVVAIGNPFGFSQTVTSGIVSAVGRSGIRGLGYQNFI
                     QTDASINPGNSGGALVDLQGQLVGINTASFNPQGSMAGNIGLGLAIPSNLARSVVDQL
                     VKHGVVVRGTLGVESQNLTAQIAQGLGLGESRGALITRVLAGSAAATAGLKPGDVVVS
                     ANGQRVDSAEALHNVEGLAAVGSPLTLDVRREGKPLQIKATLKEQARAVTGDSLDPRL
                     GGATFVDLPESLRQSGVGGVLVSEVKRGSRAASNGLQQGDIITDATVGEFADLASWRA
                     NFQQRPPTLVLRVLRNNGQQQGQLVMR"
     gene            8718..9617
                     /locus_tag="QEL58_002896"
     CDS             8718..9617
                     /locus_tag="QEL58_002896"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017355210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histone"
                     /protein_id="HDS1677345.1"
                     /translation="MSNGNGNGVSVVTDAVENVKEAATNVGETIAHAAEDAVKSVKKT
                     VKRATKAAGTRVAKAKKAVAKVEKTVAKKAEKAAKSVGKTVAKAKQKLEAAKKNAKAE
                     AAALKKEVAKKKAAAGKAVTKKAAAAKKTTKAATKAAGKKVATVKKAATKKAAVAKKT
                     VAKKAAAAKKVVGKKVATAKKAVAKKTVAAKKVAGKKAVAAKKVVGKKVAATKKVATK
                     KTAAAKKVVGKKAAVAKKAVGKKTAAAKKVVGKKTAVAKKAVGKKVAATRKTVAKKAA
                     PLKKVAAKKAPAKKAVRKVAKRK"
     gene            9724..>10269
                     /locus_tag="QEL58_002897"
     CDS             9724..>10269
                     /locus_tag="QEL58_002897"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005411986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677346.1"
                     /translation="MRGIDFSSWQGVLSTLAGLVLITLLGVGIRLLVMQTLQQRRERE
                     NRQINERLRTLMAAYKTLGGSFTGELGVDPSHRRDLRQREDAEGIAEPRSDRARRIRD
                     AVEAALSDILLLGTDEQVRLAARAANELAQGRPVHTHDLVISLRDFVREALDLAPIPA
                     GLQIPPQGPTRPGASGKGRNDG"
BASE COUNT         1702 a         3449 c         3559 g         1559 t
ORIGIN      
        1 tggcctttga cgttgggtcc gccttatagc gagccgagca tcgcagggga atcaggggcg
       61 aagaggcgcc ggtgtttgag cgcagcgagt tcggcgccgt cccctgtttc cccgagaagc
      121 gcagggcacc ggtgcgtagc accggctcgc gacctggcgg cgtgtttctt tggttacttt
      181 cttgatggcg cacatccatg tgcgccaccc tacgggccgg ctgcgccgtt ccgcgctgct
      241 cctgcagcgc ggtgcacgag caaagaaagt gacaccccac cgcaggcgcg gaaacgatcc
      301 gccgggaact cccggcgaac ccgatcaatc cttcccgcgc gccatcgcct ggaacacccc
      361 gtcacgccgc acccacaggt ggaacagcgc cgcccccacg tgcatcagca cggtggcgaa
      421 caatacatag gccagcaggc tgtgcgcgtt gcgcagcgcg gcatacagcg ccggggtgtg
      481 cggcacgatc ggcggcaggt gcaggccacc ccacagcacg atcgggtaac cgccggccga
      541 cagcatcgcc cagccgatca gcggcatcgc cagcatcagc gcgtacagca tccaatgcga
      601 cgccttggcc gccatcacct gccacaccgg cagatcggcc ggcagcggcg gcgggcgatg
      661 gcgcagccgg ttgtacaggc gcagcagcac cagcagcagg atcgcgatgc ccagtggacg
      721 gtgcaggtcg atcagcacgg ggcgcagatg cagcgaggcg accatggtca cgccgatgaa
      781 cagcatggcg atgatcatca gcgccatgga ccagtgcagt acccgcgcca gcaggttgaa
      841 gtggccattg ccggtgctca tcgtgcggcc tccttcggtt gctccacgtt gccgctggcg
      901 cgctcgcgct cgcggcggtt gaacgactgc gaatacaccg ccgagcgtgc ggccaggatc
      961 ggatcgtcgc tgccgcgcac gccgctgggc aggatcagcg gatcgaagtt gatctgtccg
     1021 caggcgcctt cttcctgcga ctgcatgcgg tccaggctga gcacgccggc caccacctgt
     1081 tcacgcgact cgggccacgc taccgacgga tcatcgatgg cgtcgccggg ctcggcggtg
     1141 ctgacgacca ggttccagcg caccggacca ctggccaggc gctgctgcag ttcctggctg
     1201 aggaagtcga cgctggcctg cttgcgcgtt tcggcgtcca tttccaccac tggcgcctgc
     1261 ggctgccagc gccagcgcac cgcgcgcttc tggccctgcg cgttggtgaa ccagaagctg
     1321 ttgacgctgt tgaaggtagt gtcggcccag ctgctggtcc acggtgcggt cttggcccat
     1381 tgctggaagg cctgtgcact ggggtacttc gccagcacgg ccgccatctt ctgcgggtcg
     1441 ggcttgccgg tggccgggtc gggaatggag gcgcgggtct gctcgaagaa cgcctcggca
     1501 tcgggaacgg cgaagaacgg gaagctgttc atcgccatgc gccattcctg gccgtcatcg
     1561 ctgaccatct gcacggcgat gctgcggacg cgtgcggtgt tgtcggcgcc gtagggatcg
     1621 ccgccgccga tcgacagccg ccccatcacc ggcacgcgcg gttgcgagaa cacccgtgcg
     1681 ctggacagcg tcggcgcctg cgcgctgggt tcgaaccagc cgctcacgca gatgcccttg
     1741 ctgtgcgcac ggcggaagcc gggatgcgcc gggccggtgg cttcgatggt gtcggtgaag
     1801 cgctgcgcgg tcaggcggtt gccgatccag ccggccagcc aggcgaaggt cagtgcgacg
     1861 gcacccagga tgagcgcgat cagtgcgatc cagagcagcg gcgaatgcct gcgcggtgcg
     1921 cccggcgcct ggccggcgcg ggtatagcgg aagagcgaca tggtcgggtt cctgccttca
     1981 cggagcgtgt gggtggtcga cccgcacatc ctcgcagaac ccttccaggc ccggtattca
     2041 aattttcgtc aagtttgccg gggacggcgt gccgaccaag gtcggcaccc acccgatcag
     2101 ctgtagcgcg ccttcagcat cgcccaggcc gaacgcagcg ccagcgcttc gccaccggcc
     2161 ggacggcccg gtcgctcgcc gtcgttccag gcatagacgt ccagatgcgc ccagcgctgg
     2221 ccgtcttcca ggaaacgttc caggtacagc gcggcagtga ccgagccggc catgcgcgaa
     2281 ccggcattgg ccaggtccgc gatgccactg gtcagataac gcaggtaggg gcgccacagc
     2341 ggcatgcgcc agaccgggtc gcgggtcgcg tcgccggcct gcagccactg ctgggccacg
     2401 ctgtcatcgt tgctgaacag tgccggcagg tccgggccca gcgcgatgcg tgcggcaccg
     2461 gtgagggtgg cgaagtccag caccaggtcg ggtttctgct cgctggcgaa ggtcagcgcg
     2521 tcgcacagga tcacgcggcc ttcggcgtcg gtgttgtcga tctccacgct caggcccttg
     2581 cgcgtggcga tgacttcgcc cgggcggaag gcatccgggc cgatcgcgtt ttccaccgcc
     2641 ggcaccagca gggtcagccg caccggcagc ccgcgcgcca tcaccaggcc ggccagggcc
     2701 agcgcgtgcg cggcgccgcc catgtccttc ttcatgttgc gcatgccgtc ggccggcttg
     2761 atgtccaggc cgccggtgtc gaagcacacg cccttgccga ccagcaccag tgccgggtcg
     2821 gtgtccttgc cccagcgcag cacgaccagg cgcggagcgc ggtgcgaggc gcggcccacg
     2881 gcgtggatgg ccgggaagtt ctgcttcagc agcgcatcgc cggtgatcgc ctcgacctcg
     2941 gcgccatgcg cgtcggccag cgcacgtgcg gcgtcttcca gctgctgcgg acccatgtcc
     3001 tcggtcgggg tgttgaccca gtcacgcacg cgcaggctgg cggtgatcag gtcggccgct
     3061 tcgccggtgg gggtggccac cagctgcgcc ggcgcacggt ggcgcttgcg gtagcggtcg
     3121 aagcggtagc tgcccaggcc ccagccgagc tgcatcagcg cctgttcggc ggccggcagt
     3181 tcgctggcca gctgccacac gctgccttcc ggcagggcgt gcggagcgtg cgagtagctg
     3241 taggcgtcgg cgcgatcacc gacgccgatc accgcaccgg ccaggccgtc ggcaccgggc
     3301 agcagcgcgg tgctgaacgc gccggcagta aagccctgcg atgccagcca ggcctgggtg
     3361 gcggccggct ggccgtcctt ccaggccgcg aactgctcgc ggtccagcac gtacagcggc
     3421 agcgctgcgg tggcgtcggt ggtgaaacca gtgatctcgc tcatgcgtca gatactccgg
     3481 ggtgcggcag cgtcgaggtt ggcatccaac cagtcggcca ggccggtgag ggtgtcgaac
     3541 tgcaggtccg gctgcagctg cggatgggtc caggtggcgg cttcacggtt gatccagcat
     3601 ccgcgcaggc ctgcggcgat tgccccggcc acgtccatct cggcatggtc gccgacatgc
     3661 agcacctgtg ccggcgccac acccaggcgg ttgcaggcgg cgtggaagat gcttgcctcg
     3721 ggcttggccg cgccgtgctc gcgcgcgccc aactggaagg cgaaatgatg ggccaggccg
     3781 atccgttcca gatcggcgtt gccattgctc agcgccgcca ccggcacccg cgcggcaatc
     3841 cgcgccagtg cctcgatcgc atcggggtag cactccacct ggttgcgcgc ggcgtagaac
     3901 acttcatacg ccggctccag caggtcgagg ctggcgccgc tgccgtgcag ggcttcgtgc
     3961 agggtcagcc ggcgcagtgc gctcaggtcg tgatggaggt gcggatgggc gtggtacagg
     4021 cgctcgcgca gttcgcgcat ggctgccacc ggatacatcg cggcggtggc ggggctgtgt
     4081 tcacgcatcc actcgtgcag gaccaggtcg atgcgggcgc cgatcggagc gaacggccac
     4141 agcgtgtcgt caaggtcgag ggtgatggct tggacgggga aattcacccc gccattctac
     4201 gcctgcgcgc gcgggctttc attccagcag gcgcgcccag ccctgcatgc cgtccagccg
     4261 tgccagcacc agcttgatgc acaccagcag cggcactgcc agcagcagcc cgatcatgcc
     4321 ccaggcccag ccgaacacca tcagcgccag gatcagcacc agtggcgaca gcttcatgcg
     4381 ccgccccagc acgatcgggg tcaccacctg gccctccacg gtatgcaggg ccaggtaggc
     4441 ggccgccggc agcagcgcct gcagcgggtc gctgaattcc acgaaaccca tcagcagcat
     4501 cagggccacg ccgatcagcg ggcccacgta gggcgcgaaa ttcagcagcg ccgccaccgt
     4561 gccccacagc agtgcatcct gcaggctgat gccgaacagc atcaggacac cggcgaacac
     4621 cagcccgacc agggtattga tcacgctgat ggtcagcacg tagcgcgaga cctcgcgctc
     4681 gatcgaacgc aggatgtcgc tggtgaagcg ctgttgctgg cggttcggga acagcgcgat
     4741 cgccgcgcgc tgcaggttct gcccgtagat catgaagaac agggtcagca gcaccaccgc
     4801 cagcaccgag gcggccagcc gtggtgcacg ggtcagcatg cggtacgggt cgtcgagctg
     4861 ggtgcggatc acctgcacct tgcggttgct gtcaccgccg gcgacacgcg cgaagttctc
     4921 tgcggcctgg ttggcctgct gcaccggctt ggtcaggtcc tgcacctggc gcgcgacctt
     4981 gcgcagctgc tgcggggcct cctgtgccca ctccatcgcc gggccgatca gctgcaccgc
     5041 caacgcaccg gtcacgccga gaccggcgcc gagcaccagc agtgcgccca gcgcacgtgg
     5101 aatccacagc ttctgcagca ggcgcaggat cgggttgccg accagcgcga agaacaccgc
     5161 cagcagcacc ggcaggatga tgtcctgtgc ggcccacagg gtgtagccca ccgccagcgt
     5221 ggccagcacc accagcgaca tcggcccgcg cgggcgagat ggtggcggca gcggcgcttc
     5281 gggcagttcg gggccgggcg ctgacgggga caggaggggc tcgctcatcg acgcatcaac
     5341 cggaaaggga agcgcattat ccgccggccg tgatcggcgc ggcggattcc atccatcaac
     5401 gttcggacag ttcagtggcc gcttcggccg gacgcggctc gcgcagttcc ggttccgccg
     5461 ccggctgtgc tgccggtgcc gggcgagcgg cggatgccga tgcggctgcc tgtgcctgct
     5521 cgctggcatc gtcggcttct tcggcggcat cgtcggcggt ggctgcggcc tgcgccgcca
     5581 tggccgtagc gaacgccgcc tgcgcgctgg cgaacaggtt cgagaccgag cccaccatct
     5641 gcagccaccg cgcaccgttg accttgcccg gcacttccag cttgccggcg atgaagccgc
     5701 cggccaggcc gaccaccacg atgcgcagcg gcgaccagcc ctggcgccag acctggctga
     5761 gcgtggacca gtggtcctgg gtctcgacca gtcgcaccgt caccacctgt tcgcagcgtt
     5821 tcacccgccg ctgcagcgca ccgaacttca tggcttgccc tccggcagct gcacatcggc
     5881 atccgggtca tcttcgctgg gctcgtcgaa caggcccagg cgtgacagct ggcgccgggt
     5941 ggcgtgcatg ccggtgtggt ggaagaagta ggacacccgc cagatcgcat agccggtcac
     6001 ggccaggctc agcagcgagg tgatcagcag ggcctgcagc cagctcaggc cccagctctg
     6061 cagcagggcg atgagggtgg ccgccatcag cagccaggcc gacgcaccga acacgatcgc
     6121 cacgccggcc caggccagtg cacggccgaa cgcactgcgt gccagcgcga agtcggccga
     6181 agccaaccgg cgcaacgagc gcagcgaatg cttggccgaa tcggcggcgg cacggccggc
     6241 cgcaccgacc tggcggatgc tctcatccag cggcggggtg gccgccggat caggcgcttg
     6301 cgcgttgtct tcgctcacgc tgcggcttac ttgtcgctgc tgccgcgggc cagcttggcg
     6361 atgatccagc cggcggcgaa ggcgacgccg aacgaggcca gcggacgttc gcggatcagc
     6421 tcagcggcgc tgtcgatcag atccttgccc ttgtccatca gtgcatcgac ctgttccttg
     6481 gcggcggcac caccgaactc ggcggcggcc aggccggaca gcgcgctgtc ggacagttcg
     6541 gccttgacgt tggccttgcc gatgcgcagt tcatcggtcg cagcaccggt tgcgcccttg
     6601 atcgcaccgc cggcggccgt ggcggcctgc ttcaggtggg aaccggcttc acccaggtgt
     6661 tccttcaggt tctcggtatt ggtggggctc atcgaatcac tcctgttgcg atgggggaac
     6721 gggtgtcggc ggtgccgacc tggactgaca gcaatagcat tgccggggta tagggggtgt
     6781 tacggcgggg cgatcagcgc atcacgagct ggccctgctg ctggccgttg ttgcgcagca
     6841 cgcgcagtac cagggtcggc gggcgctgct ggaagttggc acgccagctg gccaggtcgg
     6901 cgaattcacc caccgtggcg tcggtgatga tgtcgccctg ctgcaggccg ttgctggccg
     6961 cgcgactgcc gcgcttgacc tcgctgacca gtacgccgcc aacgcccgac tggcgcagcg
     7021 attcgggcag gtcgacgaag gtggcgccgc ccaggcgtgg gtccaggctg tcgccggtca
     7081 ctgcacgtgc ctgctccttc agcgtcgcct tgatctgcaa cggcttgcct tcgcggcgca
     7141 cgtccagcgt cagcgggctg ccgaccgcgg ccaggccttc cacgttgtgc agcgcctcgg
     7201 cgctgtccac gcgctggcca ttggccgaga ccaccacgtc gcccggcttc aggccagcgg
     7261 tcgccgcggc cgaaccggcc agcacgcggg tgatcagcgc gccgcggctt tcgcccaggc
     7321 ccaggccctg cgcgatctgc gcggtcaggt tctggctctc cacgcccagc gtgccgcgca
     7381 ccaccacgcc atgcttgacc agctggtcga ccacgctgcg cgccaggttg gagggaatcg
     7441 ccaggcccag gccgatgttg ccggccatgc tgccctgcgg attgaagctg gcggtattga
     7501 tgccgaccag ctgcccctgc aggtcgacca gcgcgccgcc ggagttgccc ggattgatcg
     7561 acgcatcggt ctggatgaag ttctggtagc ccaggccgcg gatgccgctg cggcccacag
     7621 ccgagacgat gccggaggta accgtctggc tgaagccgaa cggattgccg atggccacca
     7681 cgaagtcgcc cacccgcagc tggtcgctgt tgcccagttt gatgtcggtc aggttctgcg
     7741 ccgggatgcg gatcagcgcg atgtcggtat cgcggtccga accgaggaat tcggccttga
     7801 ccgtgcgccc gtcggccagc gtcacctgca cgtcatcggc attgtcgatg acgtggtggt
     7861 tggtcagcac caagccttcc ttggcgtcga tgatcacgcc cgagcccagc gattcattga
     7921 tgcgttcctg cgggatgtcc gggaacaggc ggcggaagaa cgggtcgttg aagaacgggt
     7981 tgcgtacgcg caccacctgc ttggtgttga cgctgaccac tgccggcatc gccttttcca
     8041 gcattggcgc cagcgagggc accgcctgtc cggccaccga ggccggcaat gccgcggtgg
     8101 tcggcaacac cgccggcagc ggtgcggcat cggcgcggtt gtccaggtgt gcattgaggc
     8161 cggtggcaac gaagccaccg aaggcagcgg cgattgcgag cgtgagcagg gtggggagcg
     8221 gtcgcatggg cgtcggttcg caggcgtggg tgggggcggt tcggccctac ggtaaaacaa
     8281 gctgaatgag tgtgtcgcga tctggataaa tgcgccatga aaaccgcgtg cccggcaggc
     8341 ggatccgaat gccggcggcg aggccaaagc gaccgtcatg gcagcgatgc gtgcactgcc
     8401 gaaggtggcc gaccgcgagc tggacacaga cggatacctg cgcagttccg cgcaaccgag
     8461 tgccgcaatg cgccacaacc tgcgcggatc agcgcatcgg tgccggccac tgcggtgctg
     8521 cccatcctgc gtgtggcgcg tgtggcgcag tccttaaaaa aaggggtttg ctgcaaagca
     8581 gtcgtgctgg cgaccgtgcc tggctacacc attgccgtcg cagcagatgc gattgtcggc
     8641 gtgtgccccg ttccacgatc gtcaatgtcg gtatagcatc gccccgtttt gatactaaag
     8701 gcccccagga gggcaacatg agcaacggta atggtaatgg tgtgtcggtc gtgaccgacg
     8761 ccgtcgagaa cgtcaaagaa gccgccacca atgttggcga gaccatcgcc cacgccgccg
     8821 aagacgccgt gaagtcggtc aagaagaccg tcaagcgcgc caccaaggct gccggtaccc
     8881 gcgttgccaa ggccaagaag gccgtggcca aggtcgagaa gaccgttgcc aagaaggccg
     8941 agaaggctgc caagtcggtc ggcaagaccg ttgccaaggc caagcagaag ctggaagccg
     9001 ccaagaagaa cgccaaggcc gaagccgctg ccctgaagaa ggaagtggcc aagaagaagg
     9061 ccgctgcggg caaggctgtg accaagaagg ccgccgctgc caagaagacc accaaggccg
     9121 ccaccaaggc tgccggcaag aaggtcgcca ccgtgaagaa ggccgccacc aagaaggctg
     9181 ccgtggccaa gaagactgtt gccaagaagg ccgcggccgc caagaaggtg gtcggcaaga
     9241 aggtcgccac cgccaagaag gctgtggcca agaagaccgt cgccgccaag aaggtcgccg
     9301 gcaagaaggc cgtggctgcg aagaaggttg tcggcaagaa ggttgccgcc accaagaagg
     9361 tcgccaccaa gaagaccgct gcggccaaga aggttgtcgg caagaaggcg gccgttgcca
     9421 agaaggccgt cggcaagaag accgctgcgg ccaagaaggt cgtcggcaag aagaccgccg
     9481 tcgccaagaa ggcggttggc aagaaggttg ccgccacccg caagacggtc gccaagaagg
     9541 ctgcaccgct gaagaaggtc gccgccaaga aggctccggc caagaaggcc gtgcgcaagg
     9601 tcgccaagcg caagtaatcg cgccgtgacc gaaggccctg ccatctccgg gtggtggggc
     9661 ctttcgcgtt tctgggacat ggcctggggc aagatgcagg ctcttcccgc cggagtgccg
     9721 agcatgcgcg gtatcgactt cagttcctgg cagggcgtgc tgtccacctt ggccggcctg
     9781 gtcctgatca ccctgctcgg cgtgggcatc cgcctgctgg tgatgcagac cctgcagcag
     9841 cgtcgcgagc gcgagaaccg gcagatcaat gagcggctgc gcacgctgat ggccgcctac
     9901 aagaccctgg gcggttcgtt caccggcgaa ctgggggtgg accccagcca tcgacgcgac
     9961 ctgcgccagc gcgaagatgc cgaaggcatc gccgaaccgc gttcggaccg cgcccgccgc
    10021 atccgcgatg cggtcgaggc ggcactgtcg gacatcctgc tgctgggcac cgacgaacag
    10081 gtgcggctgg ctgcacgcgc ggccaacgaa ctggcacagg ggcggccggt gcacacccac
    10141 gacctggtga tctcgctgcg tgacttcgtg cgcgaagcgc tggacctggc gccgatcccg
    10201 gctggcctgc agattccgcc gcaggggccg acccggcccg gcgccagcgg caagggccgc
    10261 aatgacggc
//
LOCUS       DAOKIP010000144        10204 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.144,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000144 DAOKIP010000000
VERSION     DAOKIP010000144.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 10204)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10204)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10204
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.144"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..1118)
                     /locus_tag="QEL58_002898"
     CDS             complement(<1..1118)
                     /locus_tag="QEL58_002898"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HDS1677347.1"
                     /translation="MTLPASRRHFLQLAGAGLALAGSGLPRLGQAQPAAVAAPAPADG
                     AVLLNFNECPYGPSPAAQLAARDSIAQCGRYRFALAGQVRDAFIEQAHISADHVRLYP
                     GSSEPLNRAATLWTGPQAGLVVADPTFETLGEVAAAHGAHVQKVPLRDDGAHDLRAMV
                     AAAHARPTGLLYVCNPNNPTGSISPPDELAWLLAHKPASTRVLVDEAYLQYSEQPSLI
                     TQVAQRDDLIVLRTFSKLYGMAGLRLGVAAAHPDRLRELASLGDNPLPVPALAAALAS
                     LRDPQLIAQRRLQNAKARQTTLAWLGKRGFSCLPSEANCFVVDVQRDGGAFAKAMAEN
                     GVVIGRSWPIWPQRVRVTVGTEEEMAAFRQAFAKVAGVP"
     gene            1349..3820
                     /gene="ligA"
                     /locus_tag="QEL58_002899"
     CDS             1349..3820
                     /gene="ligA"
                     /locus_tag="QEL58_002899"
                     /EC_number="6.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005926292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent DNA ligase LigA"
                     /protein_id="HDS1677348.1"
                     /translation="MPMSPSPAERAEDLRRQIAQANRAYHELDAPEIPDVDYDRLVRE
                     LEALEREHPELARADSPTQQVGARPSGRFPEVRHAVPMLSLSNAFSDEEVADFVRRID
                     ERLGRRSLQFSAEPKMDGLAISLRYEEGHFVLGATRGDGSTGEDVTANLREIGDIPKR
                     LHGKNWPDVLEVRGEVYMARADFEAYNERARQQGGKVLANPRNAAAGSLRQLDPKISA
                     QRRLSFFAYGTGEVQGGELPDTHSGTLAQLGAWGFPVSALCKVVEGTDGLLGYYRDIG
                     ERRDGLPFDIDGVVYKLDDRAGQQAMGFVSRAPRWAIAHKFPAQEQSTTVEAIEIQIG
                     RTGAATPVARLAPVAVAGVIVSNATLHNADQIARLDVRVGDSVIVRRAGDVIPEVVSV
                     ILDRRPPGTTPWQMPTRCPVCGSEIVREEGAAAWRCSGELSCPAQRKEAIAHFASRRA
                     MDIDGLGDKYIETLVDAGIVKSVADLYRLNRDQLLHLKLVLDAEDPSALAAALKLHLP
                     AEGSGAVLNAVLKLDGTDPGWRAQALVQPASFDWNTKKIATKWADNLIAAIDASRAAT
                     LERLLFALGIEHVGESTAKALAQWFGDLELIRHLPWPLFKRVPDIGGEVARSLGHFFE
                     QQGNQQAIDDLLQVGQVRISDVHAPSAKLREGLDLAQLLVESEIPGITRLRAEKLVAA
                     LPGAQAVLDAEHGQFVNAGLPDDTARGLAQWLDAEGHGVMLLAAEKAMQLILAKAPAL
                     AEIVAGPLDGQTVVLTGTLAQLTRDAAKERLEALGAKVSGSVSKKTSFVVAGTEAGSK
                     LDKAQSLGVPVWDEDRLLAYLAEHE"
     gene            3870..4355
                     /locus_tag="QEL58_002900"
     CDS             3870..4355
                     /locus_tag="QEL58_002900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010480482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDS1677349.1"
                     /translation="MQTAPLDFRLATRADEERLIALMREFYAEDRIDFDDARVRRGVD
                     ALLADPRNGEVLLWLDEAADVVGYAVIAMGFSLEQGGHFMLLDELYLSHRARGRGRGK
                     QALAICEQRARGRGVSRLRLEVNHHNELARRLYLASGYIDDTRDLLTLPLDHPRPEGI
                     L"
     gene            4352..5308
                     /gene="genX"
                     /locus_tag="QEL58_002901"
     CDS             4352..5308
                     /gene="genX"
                     /locus_tag="QEL58_002901"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EF-P lysine aminoacylase GenX"
                     /protein_id="HDS1677350.1"
                     /translation="MSAALLRTLQQRASLNALVRRFFAERDVLEVETPILSVAGNTEP
                     NIDSFHTDFTGHVDAGGRRRWLRTSPEYPLKRLLAAGVGDCYELGRVFRNGEAGGRHN
                     PEFTMLEWYRVGWDHHRLVQETAELVGQALALVGRSASLRVLSYRELFQQHVGVDPFD
                     ADEPALRAALGDVHIDPVGLTRDDWLDLLMTHHIQPHFDDAVMTVVHDWPASQAALAR
                     IRPGTPPLAERFELYLGPVELANGYHELNDAHEQRARFQRDLQRRHERGQVQPALDEA
                     LLAALPSLPACAGVAVGVDRLLMAMNRTPRIADVLAYDFAHA"
     gene            5448..6176
                     /locus_tag="QEL58_002902"
     CDS             5448..6176
                     /locus_tag="QEL58_002902"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005413902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3011 domain-containing protein"
                     /protein_id="HDS1677351.1"
                     /translation="MVKWFAVVAAPVYSIALWGAWLPSSASAQQVGYDDAVVTCESRD
                     MAWVHCDIDVSNGVDLVRQLSNSSCIRGSEWGTDRSGVWVTLGCRAEFRARRAAGATG
                     AATEGKRLVRRVVRCESNGRPQSCPVRLDGAPVRLLRQLSALPCREGQGWGYKRNEVW
                     TSRGCQGDFEVADDEGRFVDVPRRLTCESKSKKRRFCGASISVGAAVSEQLSNTPCEE
                     GSTWGWNRNGIWVDGGCRAEFLVN"
     gene            6223..7287
                     /gene="mtnA"
                     /locus_tag="QEL58_002903"
     CDS             6223..7287
                     /gene="mtnA"
                     /locus_tag="QEL58_002903"
                     /EC_number="5.3.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005413901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-methyl-5-thioribose-1-phosphate isomerase"
                     /protein_id="HDS1677352.1"
                     /translation="MNTASDIDYARYDHIRPILWTGDALQLLDQRKLPFVVEHVVCHD
                     SDEVASAIHALTVRGAPAIGIAAAWGVVLAARDVQAADGMQALQQLEPALQRLNASRP
                     TAVNLAWALARMRRCLNAAGPDWKALLAAEAQAIAEEDLAANRHMGALGAGLIDAGSG
                     VLTHCNTGSLATAGFGTALGVIRAGMAQHRIARVFAGETRPWLQGARLTVWELQQDGI
                     DATLIADSAASHLMKTGAVQWVIVGADRICANGDTANKIGTYQLAIAARHHGVRFMVV
                     APSSTVDMETVDGSQIEIEQRDPGELYGVGGTRTVAEGIAAWNPVFDVTPGELIDAIV
                     TERGVILNPTVENMRAAFGG"
     gene            7505..10141
                     /gene="gyrA"
                     /locus_tag="QEL58_002904"
                     /pseudo
     CDS             7505..10141
                     /gene="gyrA"
                     /locus_tag="QEL58_002904"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017158164.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase subunit A"
BASE COUNT         1744 a         3314 c         3555 g         1591 t
ORIGIN      
        1 ggtacgccgg ccaccttcgc gaacgcttgg cggaatgccg ccatctcctc ttcggtgccc
       61 acggtgacgc gcacgcgctg cggccagatc ggccagctgc gcccgatcac cacgccgttc
      121 tccgccatgg ccttggcgaa ggcgccaccg tcgcgctgga catcgaccac gaagcagttt
      181 gcctccgagg gcaggcagct gaagccgcgc ttgcccagcc atgcaagggt ggtctgtcgt
      241 gccttcgcat tctgcagtcg tcgctgcgcg atcagttgcg ggtcgcgaag gctggccagt
      301 gccgccgcca gtgcgggcac cggcaacggg ttgtcgccga ggctggccag ctcacgcagg
      361 cggtcgggat gggccgccgc aacgcccagc cgcaggccgg ccatgccgta cagcttggag
      421 aacgtgcgca gcacgatcag gtcatcgcgc tgtgcaacct gtgtgatcag gctcggctgc
      481 tcgctgtact gcaggtaggc ctcgtcgacc agaacgcggg tcgacgccgg cttgtgggcc
      541 aacagccagg caagctcatc cggcgggctg atcgagccgg tcggattgtt cgggttgcac
      601 acatacagca gcccggtggg gcgtgcatgc gcggcggcga ccatcgcgcg caggtcgtgt
      661 gcgccgtcgt cgcgcagcgg aaccttctgc acgtgcgcac cgtgcgcggc ggcgacctca
      721 cccagcgtct cgaaagtggg gtcggccacc accagtcccg cctgcggacc ggtccacagc
      781 gtggcagcac ggttcagtgg ttcactggag ccggggtaca ggcgcacgtg gtcggcggaa
      841 atgtgcgcct gctcgatgaa ggcgtcgcgg acctggcccg ccagcgcgaa gcgatagcgg
      901 ccgcactggg cgatgctgtc gcgcgccgcc agctgtgctg caggcgaggg gccgtagggg
      961 cattcgttga aattcagcag cacggcgccg tcggcagggg caggcgccgc gacagcggcg
     1021 ggctgtgcct ggccgaggcg gggcaggccg ctgcccgcca aggcgaggcc ggcaccggcc
     1081 agttgcagga agtggcggcg ggaggcaggc agggtcacgg gcgggattcc agagggcaac
     1141 cgacgcacgc taacgctggt ggtgatgggc ggcaagcccg cttgttgtgg attcgagcca
     1201 tgctccattg gagatgtgcc aaccaaggtt ggcacctgcc agggcggggg agcgccagtc
     1261 gagcaagctc gactctacaa agggcgccgg cgttacaggg cctgacggcc gggcgcggta
     1321 gaattcccgg ccatcccaga accaccggat cccgatgagc cccagccccg ccgaacgcgc
     1381 cgaagacctt cgccggcaga tcgcccaggc caaccgcgcc taccacgagc tggatgcgcc
     1441 ggagatcccc gacgtcgact acgaccggct ggtgcgcgag ctggaagcgc tggagcgcga
     1501 gcatccggag ctggcacgtg ccgacagccc gacccagcag gtcggcgccc gtccctccgg
     1561 ccgtttcccg gaagtacgcc acgcggtgcc gatgctgtcg ctgtccaatg ccttcagcga
     1621 tgaggaagtg gccgacttcg tgcgccgcat cgatgaacgc ctgggccgtc gcagcctgca
     1681 gttctcggcc gagccgaaga tggatggcct ggcgatcagc ctgcgctacg aagaaggtca
     1741 tttcgtgttg ggcgccaccc gcggcgatgg cagtaccggc gaggacgtga ctgccaacct
     1801 gcgtgagatc ggcgacatcc ccaagcgcct gcatggcaag aactggcccg acgtgctgga
     1861 ggtgcgcggc gaggtctaca tggcccgcgc cgacttcgag gcctacaacg aacgtgcgcg
     1921 ccagcagggt ggcaaggtgc tggccaaccc gcgcaatgcc gccgccggtt cgttgcgcca
     1981 gctggacccg aagatcagcg cgcagcgcag gctgagcttc ttcgcctacg gcaccggcga
     2041 ggtgcagggc ggcgaactgc ccgacaccca ttcgggcacg ctggcccagc ttggcgcctg
     2101 gggcttcccg gtcagtgcgc tgtgcaaggt ggtggaaggc accgacggcc tgctcggcta
     2161 ttaccgcgat atcggtgagc gccgcgatgg cctgccgttc gacatcgatg gcgtggtcta
     2221 caagctggat gatcgcgccg gccagcaggc gatgggcttc gtctcgcgtg cgccgcgctg
     2281 ggccatcgcg cacaagttcc cggcgcagga acagagcacc accgtggagg cgatcgagat
     2341 ccagatcggc cgcaccggtg ccgcgacgcc ggtcgcgcgg ctggcgccgg tggcggtggc
     2401 cggtgtgatc gtgtccaacg ccaccctgca caacgccgac cagatcgcac ggctggatgt
     2461 gcgcgtgggc gatagcgtga tcgttcgccg cgccggtgac gtgatcccgg aagtggtcag
     2521 cgtcatcctc gaccgccgcc cgccgggcac cacgccatgg cagatgccga cgcgctgccc
     2581 ggtgtgcggt tcggagatcg tgcgcgagga aggtgcggcg gcatggcgct gctccggcga
     2641 gctgtcctgc ccggcgcaac gcaaggaagc cattgcccat ttcgcctcgc gccgcgcgat
     2701 ggacatcgat ggtttggggg acaagtacat tgaaaccctg gtcgacgcgg gcatcgtcaa
     2761 gagcgtggcc gacctgtacc gcctcaaccg cgaccagctg ctgcacctga agctggtgct
     2821 ggatgctgaa gacccttccg cactggccgc cgcgctgaaa ctgcacctgc cggccgaagg
     2881 cagcggtgcg gtgctcaacg cggtgctcaa gctggatggc actgatccgg gctggcgcgc
     2941 acaggcgctg gtacagccgg ccagcttcga ttggaacacg aagaagatcg ccaccaagtg
     3001 ggccgacaac ctgatcgcgg cgatcgatgc aagccgcgcc gccacgctgg agcggctgct
     3061 gttcgcgctc ggtatcgaac acgtcggcga gagtacggcc aaggcgttgg cgcagtggtt
     3121 cggtgatctg gagctgatcc gccacctgcc gtggccactg ttcaagcgcg taccggacat
     3181 cggcggcgaa gtggcgcgtt cgctcggtca cttcttcgag cagcagggca accagcaggc
     3241 catcgatgac ctgctgcagg tcggccaggt gcgcatcagt gatgtgcatg cgcccagtgc
     3301 aaagttgcgc gaaggcctgg atcttgcgca gctgctggtt gaatcggaaa tccccggaat
     3361 cacgcgcctg cgcgcggaga agctggtggc ggcgttgccg ggcgcccagg cggtgctgga
     3421 tgccgaacat ggccagttcg tcaacgcggg cctgccggac gacaccgcgc gcggcctggc
     3481 gcagtggctg gacgccgaag gtcatggcgt gatgctgctg gcggccgaaa aggcgatgca
     3541 gctgatcctg gccaaggcgc cggcgctggc cgagatcgtg gccggcccgc tggacgggca
     3601 gaccgtggtg ctgaccggca ccctggccca gctcacccgc gatgccgcca aggagcgcct
     3661 ggaggcactc ggtgccaagg tctccggcag cgtctcgaag aagaccagct tcgtggtggc
     3721 cggtaccgag gcgggctcca aactggacaa ggcgcagtcg ctgggcgtgc cggtgtggga
     3781 cgaggaccga ctgctggcct acctcgccga acacgaatga tgacttcgcc gggtgcctcg
     3841 cgcccggcct gaaacacaaa ggaacaccga tgcagaccgc cccgctggat ttccgcctcg
     3901 ccacccgcgc cgatgaggaa cggttgatcg cgttgatgcg cgagttctat gccgaagaca
     3961 ggatcgactt cgatgatgcg cgcgtgcgtc gcggcgtgga tgcactgctg gccgacccgc
     4021 gcaacggcga agtgctgctg tggttggacg aggcggctga cgtggtgggc tacgcggtga
     4081 tcgcgatggg cttcagcctg gaacagggcg gccacttcat gctgctggac gagctgtacc
     4141 tgagccatcg cgcgcgcggc cgtggccgtg gcaagcaggc gctggccatc tgcgaacagc
     4201 gcgcccgcgg gcggggcgtc agccggctgc gcctggaagt gaaccaccac aatgaactgg
     4261 cgcgccgcct gtacctggcc agcggctaca tcgatgacac ccgtgacctg ctgaccctgc
     4321 cgctggacca tccgcgtccg gaggggatcc tgtgagcgcg gccctgctgc gcacgctgca
     4381 gcagcgcgcg tcactcaatg cgctggtgcg tcgcttcttc gccgagcgcg atgtgctgga
     4441 ggtggagacg ccgatcctgt cggtggcggg caacaccgaa ccgaacatcg acagcttcca
     4501 taccgatttc accggccacg tcgatgccgg cggccgccgc cgctggctgc gcacctcgcc
     4561 ggagtatccg ctcaagcgcc tgttggcggc cggtgttggc gactgctatg agctgggccg
     4621 ggtgttccgc aacggcgagg ccggtggccg ccacaacccg gagttcacca tgctggagtg
     4681 gtatcgggtc ggctgggacc accaccggct ggtgcaggaa accgccgagc tggtcggcca
     4741 ggcgctggcc ctggtcgggc gcagtgcatc cctgcgcgtg ctcagctacc gcgagctgtt
     4801 ccagcagcat gtgggcgtgg acccgttcga cgccgatgag cccgcactgc gcgccgcact
     4861 gggcgatgtg catatcgatc cggtcggcct gacccgcgat gactggctgg atctgttgat
     4921 gacccaccat atccagccgc atttcgatga cgcggtgatg accgtggtgc atgactggcc
     4981 cgccagccag gcagcattgg cccgcatccg ccccggcacg ccgccgctgg cggaacgctt
     5041 cgagttgtac ctggggccgg tggagctggc caacggttat cacgaactga acgatgccca
     5101 cgagcagcgt gcgcgtttcc agcgtgacct gcagcgtcgg catgagcgcg gtcaagtgca
     5161 gccggcgctg gacgaagcgt tgctggccgc attgccgtcg ttgccggcct gtgccggcgt
     5221 cgccgtcggc gtcgaccgcc tgctgatggc gatgaaccgc acgccacgca ttgccgatgt
     5281 gctggcctac gacttcgccc atgcgtgagc gcagcgcttt gctgaacatc gaagaatgaa
     5341 cggattgctg cgttcgcgcg cttgcttcgg caagcaggat gatgctctta tcacggcaga
     5401 tgcgagacac tggcatcgga attcgtccac tcctgttggg gaaggcattg gtcaagtggt
     5461 ttgcggtcgt cgctgctccg gtgtactcca tcgcgctctg gggtgcctgg ctgccgtcct
     5521 cggcgtctgc ccagcaggtt ggctacgacg atgcagtggt gacctgcgaa tcgcgtgaca
     5581 tggcgtgggt gcattgcgat atcgatgtca gcaatggcgt cgacctggtc cgccagctgt
     5641 ccaacagcag ctgcatccgt ggcagcgaat gggggaccga ccgcagtggc gtgtgggtca
     5701 ccctgggctg ccgcgccgag ttccgcgcgc gccgcgctgc cggtgccacc ggcgctgcca
     5761 ccgaaggcaa gcgcctggtc cgtcgcgtgg tgcgttgtga atccaacggc cgcccgcaga
     5821 gctgcccggt gcgcctggac ggtgccccgg tacgcctgct gcggcagctg tcggcgctgc
     5881 cgtgccggga agggcagggt tggggctaca agcgcaatga agtgtggacc agccgcggct
     5941 gccagggtga tttcgaggtg gccgatgatg agggccgctt cgtcgacgtg ccgcgcaggc
     6001 tgacctgcga atcgaagtcg aagaagcgcc gcttctgcgg cgccagcatc tcggtggggg
     6061 ctgccgtctc cgagcagctg tccaacacgc cgtgcgagga gggcagcacc tggggctgga
     6121 accgcaacgg gatctgggtg gacggcggct gccgcgccga attcctggtg aactgagccg
     6181 ggcaggctcc aacgctgccg ggcgtggccc tacaatgggc ccatgaacac tgcctccgac
     6241 atcgattacg cccgctacga ccacatccgc ccgatcctgt ggaccggcga tgccctgcaa
     6301 ctgctggacc agcgcaagct gccgttcgtg gtcgagcatg tggtctgcca tgacagtgac
     6361 gaggtcgcct cggccatcca cgcactgacc gtgcgcggtg cgccggcgat cggtatcgcg
     6421 gctgcctggg gcgtggtgct ggcggcacgt gacgtgcagg cggcagatgg catgcaggca
     6481 ctgcagcagc tggagccggc gctgcagcgc ttgaacgctt cgcgtccgac cgcagtcaac
     6541 ctggcctggg cgctggcacg catgcgccgt tgcctgaacg ctgccggccc ggactggaag
     6601 gcattgctgg ccgcggaagc gcaggccatt gccgaggaag acctggccgc caaccgtcac
     6661 atgggggcgc tgggcgcggg cctgatcgac gctggcagcg gggtgctgac ccattgcaat
     6721 accggctcgc tggccaccgc cggcttcggt accgcactgg gcgtgatccg tgccggcatg
     6781 gcccagcacc gcatcgcccg tgtcttcgcc ggcgaaacgc ggccgtggct gcagggcgcg
     6841 cgcctgaccg tgtgggagct gcagcaggat ggcatcgacg ccaccctgat cgccgactcg
     6901 gcagcctcgc acctgatgaa gaccggtgcc gtgcagtggg tgatcgtcgg tgccgatcgc
     6961 atctgcgcca atggcgatac cgccaacaag atcggcacct accagctggc cattgcggcc
     7021 cgccaccacg gcgtcaggtt catggtcgtg gcaccgtcct ccaccgtgga catggagacc
     7081 gtggacggca gccagatcga gatcgagcag cgcgatccgg gcgagctgta cggcgtgggc
     7141 ggcacccgca ccgtggccga gggcattgcc gcctggaacc cggtattcga cgtcaccccg
     7201 ggcgagctga tcgacgccat cgtgaccgag cgcggggtga tcctgaaccc gaccgtggag
     7261 aacatgcgcg ccgccttcgg cggttgaagc gcaggggagg ggcagcgtga cctccgcccc
     7321 cgggttgtgc cggccgctgg ccggcaaccc ctaagttcct gatttgtgcc ggtaaaatcc
     7381 ccgtaaaggg aggcggaaaa cggcctgttg tggtagtatc cacaggttga atcgaggttc
     7441 cggcacgacc ccctcccgca gagggctgcg ccggactgga ccgctaccag acaacggaac
     7501 ccgaatggca gaaaccgcca aggaaatcat ccaggtcaac ctggaagacg agatgcgcaa
     7561 gagctacctc gattacgcca tgagcgtgat cgtgggccgc gcgctcccgg atgcgcgcga
     7621 cggcctcaag ccggtgcatc gtcgcgtgct gttcgcgatg aacgagttga acgcgcacag
     7681 caacaagccc tacttcaagt cggcgcgtat cgtcggtgac gtcatcggta agtaccaccc
     7741 gcatggcgat cagtcggtgt acgacacgct ggtgcgcctg gcacagccgt tctcgctgcg
     7801 ttacatgctg gtcgacggcc agggtaactt cggttcgatc gacggcgact ccgccgcggc
     7861 gatgcgatac accgaggcgc gcatgtcgcg cctggcgcat gagctgatgg cggacatcga
     7921 caaggaaacc gtcgatttcc agcccaacta cgacgaaaag gaactggagc cgacggtcat
     7981 gccgacccgg ttcccgaacc tgctggtcaa tggttcggcc ggtatcgcgg tgggcatggc
     8041 gaccaacatt ccgccacaca acctgagcga atcgatcaac gcctgcatcg cgctgatcga
     8101 caacccggac atcgatgtcg acggcctgat ggagtacatc ccgggcccgg acttcccgac
     8161 cgccggcatc atcaacggca ccgccggcat cgtcgccggc taccgcaccg gccgtggccg
     8221 cgtgcgtatc cgtgccaagg ctgatatcga agtggccgac aacggccgcg aatcgatcat
     8281 cgtcactgaa attccttacc aggtgaacaa ggcgcgtctg atcgagaaga tcgccgagct
     8341 ggtcaaggaa aagaagatcg aaggcatcag cgagctgcgc gatgagtccg acaaggacgg
     8401 catgcgcatc tacatcgaga tcaagcgcgg tgaatctgcc gaggttgtgc tgaacaacct
     8461 gtaccagcag acgcagatgg agtcggtgtt cggcatcaac atggtggcgc tggtcgatgg
     8521 tcgcccgcag ttgatgaacc tcaagcagat gctggaggcg ttcgtccgcc accgccgcga
     8581 agtggtcacc cgccgcaccg tgttcgagct gcgcaaggcg cgcgcccgtg cccacgtgct
     8641 ggaaggcctg accgtcgcgc tggccaacat cgacgagatg atcgaactga tcaagacctc
     8701 gccgaacccg aacgaagccc gcgagcgcat gctggcacgc gtgtgggagc caggcctggt
     8761 cggtgcgatg ctgggcgccg ccggtgccga agcctcgcgt ccggaagacc tgcccaaggg
     8821 cgtaggcctg atcgagggcg gctaccagct gaccgagatc caggccaccc agatcctgga
     8881 aatgcgcctg caccgcctga ccgggctgga gcaggaccgc ctgaccgacg agtacaagca
     8941 gctgctggaa gtgatcgccg ggctgatcca catcctggaa gatcccgacc gcctgctgca
     9001 ggtgatccgc gaggaactgg tcaacgtcaa ggctgaattc ggcgacgagc gtcgcaccga
     9061 gatccgccac agcgaagaag acctggacat cctcgacctg attgcgccgg aagacgtggt
     9121 ggtcaccgtg tcgcatgccg gttacgtgaa gcgccagccg gtgagcgtgt accgcgcgca
     9181 gcgccgtggt ggccgtggcc gcagtgcggc ggcgaccaag gaagaggatt tcatcgaaca
     9241 gctgtggctg gtcaacacgc acgacacgct gctgaccttc accagttcgg gcaaggtgtt
     9301 ctggctgccg gtgtaccagt tgcctgaagc cggttccaac gcccgcggcc gtccgatcat
     9361 caactggatc ccgctggagc cgggcgagcg cgtgcaggcc gtgttgccgg tgcgcgagta
     9421 cgccgatggc cagttcgtgt tcttcgccac gaagaacggt acggtcaaga agactccgct
     9481 gggcgagttc gccttccgcc tggcccgcgg caagatcgcg atcaacctgg acgagggcga
     9541 tgcgctggtc ggcgtcggcc tgaccgacgg tgagcgtgac atcctgctgt tcgcctccaa
     9601 cggcaagacc gtgcgcttcg gcgaggacaa ggtccgctcg atgggccgta ccgcgaccgg
     9661 cgtgcgtggc atcaagatgc cggcgggcga ggaagtggtc agcctgatcg tggccgagag
     9721 tgccggtggc agcgaggacg agaacgagga cgacaacggt gtcgaggaaa tcgcagccaa
     9781 tggcgatgcg gtgatcgacg gcgccgacga cgccagcgtg cagtacatcc ttaccgccac
     9841 cgagaacggc tacggcaagc gcaccccgct gccggactac ccccgcaagg gccgtggcac
     9901 gcagggcgtg atcggcatcc agaccaccga gcgcaacggc aagctggtcg ccgcggtgct
     9961 gatgggctcc ggcgatgaag tcctgctgat ctccgatggc ggcaccctgg tgcgtacccg
    10021 tggctcggaa atcagccgcg tcggccgcaa cacccagggc gtgaccctga tccgcctgtc
    10081 caaggacgag aagctgcagg cggtggagcg catggatgcc tcgatcgacg aggacgagga
    10141 cgaggtggcc gccgccgccc cggccgcgac cgacggcatc ccggctgctg ccagcagcga
    10201 ggac
//
LOCUS       DAOKIP010000145        10027 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.145,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000145 DAOKIP010000000
VERSION     DAOKIP010000145.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 10027)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10027)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10027
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.145"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..1099)
                     /gene="moeB"
                     /locus_tag="QEL58_002905"
     CDS             complement(<1..1099)
                     /gene="moeB"
                     /locus_tag="QEL58_002905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005413114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-synthase adenylyltransferase MoeB"
                     /protein_id="HDS1677353.1"
                     /translation="MSIRELSPAQARERLAHGAVLIDVREAHERAGGMAEGARGVAKG
                     ALQADPAAHLPRHDQEILLICQSGKRSADAAQFLLEAGYTNVASVTGGTVAWREQMLP
                     LVQPLTSEADRDFYDRYSRHLLLPQVGEAGQRRLQQSRVLVLGAGGLGAPAGFYLAAA
                     GVGHLRFADHDRVERSNLHRQIVHTEASVGQLKVDSARERLLALNPSIEVEAVPERVT
                     SENVDALLDGVDVVLDGSDNFPLRYLLNDACIKHAKPLVYAAIERFDGQVSVFDAGRQ
                     RGVAPCYRCLFPEPPPPEFAPNCSEAGVLGVLPGLAGVLQATEVLKLLLGIGEPLVGR
                     LLRFDALGMRFRETGIRPDPHCPVCAPGVPFP"
     gene            complement(1151..2083)
                     /locus_tag="QEL58_002906"
     CDS             complement(1151..2083)
                     /locus_tag="QEL58_002906"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010484599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDS1677354.1"
                     /translation="MVSRIQQSSGGDLAAFTAFLAVAAHRSFRSAAAELNITPSAISH
                     AIKALEQRLGARLFNRTTRSVSLTDAGERLAEKLRPAMASIEEALQSVDTEAGTPRGT
                     VRINASEGAIRLVLKPVLARFLRQYPQVHLDIVSDGRLGDIVSEGFDAGIRLTEAVPQ
                     DMVAVAVTAPMRFAAIASPTYLQARGRPLRPLDLHQHDCIRFRFESGAIYRWEFEHQG
                     TTERVNVSGPITLTDQPLMVDAAIEGIGIAFVPEHLALEPLADGRLLRLLEDWCPEFP
                     GLSLYYPGHRHVPPGLKALIGLLQEQHGGRGQPG"
     gene            2191..3225
                     /locus_tag="QEL58_002907"
     CDS             2191..3225
                     /locus_tag="QEL58_002907"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010484597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HDS1677355.1"
                     /translation="MKTMKAVVMTGPNAPWQVQDVPMPVIEPGQVLVKVHASGMCYTD
                     VWATQGYGGDIYPQTPGHEVVGEVVEVGAGVHTRQVGDRVGTSWVQSACGRCPYCRES
                     RPLSGQTAMNCDAPRTTGFAAQGGHAQYIAISAEGTVLLPDGLSYVDAAPMMCAGYTT
                     WSGLRDAAPQPREKIAVLGIGGLGHVALQLSKACGFETIALTHSADKHALALQLGADQ
                     VVANGKELKAIGGADVLLVTTNEFSSAEEAMTGLRVDGRVVLCGLDFSQPFSISSKGV
                     PFHMMRQRVIGATHGGQHYLSEVLQLAAAGKVKPMVETFDLDRATEAYDRLSSGRMRF
                     RGVLLPWGHA"
     gene            complement(3287..4684)
                     /gene="der"
                     /locus_tag="QEL58_002908"
     CDS             complement(3287..4684)
                     /gene="der"
                     /locus_tag="QEL58_002908"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016904421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase Der"
                     /protein_id="HDS1677356.1"
                     /translation="MLPLVALVGRPNVGKSTIFNALTRTRDALVHDQPGVTRDRNYGV
                     CRLDEDNHFLVVDTGGIAEEEEGLAGATTRQARAAAAEADLILFVVDAREGTSAMDDE
                     ILAWLRKLSRPTLLLINKIDGTDEDSVRSEFARYGFGEMLTVSAAHRQGLDDLLDEVI
                     QRLPEEGSGEELDNDPNRIRIAFVGRPNVGKSTLVNRILGEERMIASDVPGTTRDSIA
                     VDLERDGREYRLIDTAGLRRRSRVDEVVEKFSVVKTMQSIEQCQVAVLMLDATEGVTD
                     QDATVLGAVLDAGRALVIAINKWDGLTEYQREQAETLLSLKLGFVPWAESVRISAKHG
                     SGLRELFRAVHRAHESANKTFTTSEVNKALEVAYETNPPPTIRGHVSKLRYVHPAGAN
                     PPTFIVHGTRLKELQESYKRYLENFFRKRFKLIGTPVSFIFREGTNPYEGKKNVLTER
                     QVKAKRRLMKHVKGK"
     gene            complement(4702..5910)
                     /gene="bamB"
                     /locus_tag="QEL58_002909"
     CDS             complement(4702..5910)
                     /gene="bamB"
                     /locus_tag="QEL58_002909"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamB"
                     /protein_id="HDS1677357.1"
                     /translation="MSQKVMITRVATVLLMGMALTGCSTVKGWFAGKDAAAKKAQEPA
                     ELVKFEPSVKVNKAWSVNLGKGERRIGVRQGPAVANGHVFAAAITGGVHAIDLQTGKK
                     VWTWEPQKEKKKPKLRLSGGPGVGENLVVIGTLDGQVIALDINDGSEKWRARVPGEVI
                     AAPAVAQGLVFVRSNDGRVTAFDAGNGTQKWFNPSELPALTVRGNAPVVTGPGVLFIG
                     KDEGAVAALAQQDGRTLWEQNIGNGEGRTELERMADVDGAPVLEGNTLYVSSFKNQTM
                     AIEGPTGRPLWARDHGGAGGVAVSSGNVFVTDNKGGVFGLDKATGAAMWSQTELARRS
                     LTGPVLQGDYVVVGDYKGYVHWLKTSDGAMAARAKSGGDALLAQPVVADGVLLVQNVD
                     GKLTAFRLAN"
     gene            complement(5910..6548)
                     /locus_tag="QEL58_002910"
     CDS             complement(5910..6548)
                     /locus_tag="QEL58_002910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014503367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HDS1677358.1"
                     /translation="MAIDDLLDEHEQSERVRSWLRKNGASILGGVVIAIGAIAGWQWY
                     QKDQGGKLASANVEYQKALLGLQQNKLDDASKAVKALEAGPSSIYGDLAALQLAKAQV
                     DAGKNEEALATLRGVKVEGDLQRVVDQRVARLLVATGKSDEAIKLLGSAADSSSLEIH
                     GDALMAQGKRDDARAQYEKALKSLDVAAPQRRLLETKVMDAGGTVAAPAESV"
     gene            complement(6614..7486)
                     /locus_tag="QEL58_002911"
     CDS             complement(6614..7486)
                     /locus_tag="QEL58_002911"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014036902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDS1677359.1"
                     /translation="MIDDQTVSALETAAGCGTRLRQAREAAGLTLEDVGTRLRMPVQV
                     VKSLEEEQWQKLGAPVFVRGQLRSYARLLNVDVSQLLEQAQVGPVVPPTLVSHTHTPR
                     ARRIAENLGRRMLYVGITAVLAVPVWFATRGHFDGSATPSPNTASLDAIPAAVPVAPS
                     AAGVEPATPVDVASVPASKPAATPYVASLAPVPRSAPAPAAAANTLDMQFSGDSWVDI
                     GGPDGATVEKALIKSGESRSFTPGQVTRVTLGNASAVQVQQNGAIVDLTPYQRANVAR
                     FQVSSEGSVVPVSH"
     gene            complement(7505..8290)
                     /gene="pilW"
                     /locus_tag="QEL58_002912"
     CDS             complement(7505..8290)
                     /gene="pilW"
                     /locus_tag="QEL58_002912"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008268338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus biogenesis/stability protein PilW"
                     /protein_id="HDS1677360.1"
                     /translation="MPRPDRLWLALFAGVLALSVGGCKSQPKAKLGPSLAPVYSVRDP
                     DNVRRQVRWQDLLALAARDMQVGNLDAAERKAREAQKLAPEAPDALVLLAGIDERRGR
                     TPQAGESFRRAAELAPQRGDILNNYGAWLCQQGRPAESLVWFDRALQAPGYATPAEAQ
                     ANAGGCALDAGQFERAERDLRAALTTLPDNPVALEAMAQLSFRQGRYMEARAFAERRI
                     AAAPATRSVLQLASQIEARLGDRAASDRYLQRIRQEFPQEAGS"
     gene            complement(8277..9482)
                     /gene="rlmN"
                     /locus_tag="QEL58_002913"
     CDS             complement(8277..9482)
                     /gene="rlmN"
                     /locus_tag="QEL58_002913"
                     /EC_number="2.1.1.192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2503)-C(2))-methyltransferase
                     RlmN"
                     /protein_id="HDS1677361.1"
                     /translation="MNEVVQSPAIQPLPKSAPTAGKQNLLDLDRAGLEKFFVEVLGEK
                     KFRAHQVMKWIHHRYVTDFDEMTDLGKVLRAKLQAHAEVLVPNIVFDKPSADGTHKWL
                     LAMGVDGKNAIETVYIPDKTRGTLCVSSQVGCGLNCTFCSTATQGFNRNLTTAEIIGQ
                     VWVAARHLGNVPHQMRRLTNVVMMGMGEPLMNFDNVVRAMSVMRDDLGYGLANKRVTL
                     STSGLVPQIDRLSAESDVSLAVSLHAPNDALRETLVPLNKKYPIAELMASCARYLRAN
                     KRRESVTFEYTLMKGINDKPEHARELARLMRQFDNAVQAKDSGKVNLIPFNPFPGTRY
                     ERSEEAHIRAFQKILLDSNVLTMVRRTRGDDIDAACGQLKGQVMDRTRRQAEFNKTLQ
                     AGKGSDAAA"
     gene            complement(9493..9918)
                     /gene="ndk"
                     /locus_tag="QEL58_002914"
     CDS             complement(9493..9918)
                     /gene="ndk"
                     /locus_tag="QEL58_002914"
                     /EC_number="2.7.4.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-diphosphate kinase"
                     /protein_id="HDS1677362.1"
                     /translation="MALERTLSIIKPDAVAKNVIGEIYARFEKAGLKVVAAKYKQLSR
                     REAEGFYAVHRERPFFNALVEFMISGPVMIQALEGENAVLAHRDLLGATNPKEAAAGT
                     IRADFAESIDANAAHGSDSVENAAIEIAYFFAATEVVSR"
BASE COUNT         1619 a         3384 c         3317 g         1707 t
ORIGIN      
        1 ccgggaacgg cacccccggc gcgcacaccg ggcagtgcgg gtccggccgg atgccggtct
       61 cgcggaagcg catgcccagc gcatcgaagc gcagcaggcg gccgaccagc ggctcgccaa
      121 tgcccagcag cagcttcagc acctcggtgg cctgcagcac cccggccagc cctggcagca
      181 cgcccagcac ccctgcctcg gaacagttcg gcgcaaactc cggcggcggc ggctccggga
      241 acaggcagcg gtagcacggt gccacgccgc gctggcggcc ggcgtcaaac acgcttacct
      301 ggccgtcaaa gcgctcgatg gcggcgtaca ccagcggctt ggcgtgcttg atgcaggcgt
      361 cgttgagcag gtagcgcagc gggaagttgt ccgaaccatc cagcaccacg tccacgccgt
      421 ccagcagcgc atccacgttc tcggaagtaa cccgttccgg caccgcttcg acctcgatcg
      481 acgggttcaa tgccaacagc cgctcacgcg cggaatcgac cttgagctgg ccgacgctgg
      541 cttcggtgtg cacgatctgc cggtgcaggt tgctgcgctc cacgcggtcg tggtcagcga
      601 agcgcagatg ccctaccccg gccgcagcca agtagaagcc ggccggtgcg cccagcccac
      661 ccgcgcccag caccagcacg cgcgactgct gcaggcgacg ctggccggcc tcgcccacct
      721 gcggcagcag caggtggcgc gaatagcggt cgtagaagtc gcggtcggcc tcactggtca
      781 gcggctgcac caatggcagc atctgctcgc gccaggccac ggtaccgccg gtcacggaag
      841 ccacattggt gtatccagcc tccagcagga actgcgcggc atcggccgag cgcttgccgc
      901 tctggcagat cagcaggatt tcctggtcgt gccgcggcag atgcgcggcc gggtcggcct
      961 gcagcgcgcc cttggccacg ccacgcgcgc cctcggccat gccgccggcc cgttcgtgcg
     1021 cctcgcgcac atcgatcagc acggcgccat gggccaggcg ctcgcgcgcc tgcgcggggg
     1081 aaagctctcg gatgctcatg gccgcattat cgcgcaggcc gctctgccat gccttgacca
     1141 atgcccggcg ctacccaggc tgcccgcgcc cgccgtgctg ttcctggaga agaccgatca
     1201 gcgctttcag cccaggcggc acatgtcgat ggcccgggta gtacagcgaa agcccgggaa
     1261 actcaggaca ccagtcctcg agcagccgca gcaggcggcc atcggccaat ggctccagcg
     1321 ccagatgctc gggaacgaag gcaatgccga taccttcaat ggccgcgtcg accatcaacg
     1381 gctggtccgt cagcgtgatc ggcccggaga cgttcacccg ctcggtggtg ccttgatgct
     1441 cgaactccca acggtagatc gccccacttt cgaagcggaa acgaatgcag tcgtgctgat
     1501 ggagatccag cggccgcagt ggccggccac gcgcctgcag gtacgtcggc gaagcaatcg
     1561 ccgcgaagcg catgggggcg gtcaccgcta ccgcgaccat gtcctggggc acggcttcgg
     1621 tcaggcggat gcctgcgtcg aaaccctccg acacgatatc gcccaacctg ccgtcactga
     1681 cgatgtccag gtggacctgc gggtactggc gcaggaaccg cgcaagcacc ggcttcagca
     1741 cgagccgtat ggcgccttca ctggcgttga tgcggaccgt gccacgcggc gtgccggctt
     1801 cagtgtccac ggactgcagg gcctcctcga tcgaggccat ggccggccgc agcttttccg
     1861 ccagccgctc cccggcatcg gtcagcgaga cgctgcgcgt ggtgcgattg aacaggcgcg
     1921 cacccagccg ctgctcgagc gccttgatcg catgactgat cgccgagggc gtgatgttca
     1981 actccgccgc cgcactgcgg aagctccgat gcgctgccac cgccaggaac gcagtgaagg
     2041 cggccagatc acctccactg gattgttgaa tacgactcac catatcgtga aatattgaag
     2101 cgattgtctt gatagtcagc cgattctacg ctccggggtg tccgcgggca cacgccctcg
     2161 gcgctcaccc accgggacag gatcaagacg atgaaaacga tgaaagcggt tgtgatgacc
     2221 gggccgaatg cgccgtggca ggtacaggac gtgccgatgc ccgtgatcga accgggccag
     2281 gtgctggtca aggtccacgc atcaggcatg tgctacacgg acgtgtgggc aacccagggc
     2341 tacggcggcg acatctaccc gcagacacca gggcatgaag tggtcggcga ggtcgtggaa
     2401 gtgggcgcag gtgtgcacac ccgccaggtg ggcgaccgcg tgggcacctc atgggtccaa
     2461 tccgcgtgcg ggcgatgccc ctactgccgc gagagccggc ccttgtccgg gcagaccgcg
     2521 atgaactgcg atgcacctcg caccaccggc ttcgctgcgc agggtggaca cgcacagtac
     2581 atcgccatct ctgccgaagg cacggtactg ctgcccgacg gcctctccta cgtggacgcg
     2641 gcgccgatga tgtgtgccgg ttacaccacc tggagcgggc tgcgcgatgc ggcgccccag
     2701 ccacgggaga agatcgcggt actgggtatc ggtggactgg gccacgtcgc cctgcagctg
     2761 tccaaggcct gcggcttcga gaccatcgcc ctcacccatt ccgcagacaa gcatgcgctc
     2821 gcccttcagc tgggcgccga ccaggtggtt gccaatggca aggagctgaa ggccatcggt
     2881 ggcgccgacg tactgctggt gaccaccaat gagttcagct cggccgaaga ggcgatgacc
     2941 ggcctgcgtg tcgatgggcg cgttgtgctg tgcggcctgg acttcagcca gcccttctcg
     3001 atctcgtcca aaggcgtgcc gttccacatg atgcgccagc gcgtgatcgg cgccacccat
     3061 ggtggccagc actacctcag cgaagtgctg cagcttgccg ccgccggcaa ggtgaagccg
     3121 atggtcgaga cctttgacct ggaccgcgcg accgaggcgt atgaccgcct gtcgtcggga
     3181 aggatgaggt tccgtggcgt gctgttgccg tggggccacg cctgagcaag gcggccgccc
     3241 atgcaccaca acgaaaaagg cggccctgag gccgccttct tctgcatcac ttgcccttga
     3301 cgtgcttcat caagcgccgc ttggccttga cctgccgctc ggtgaggacg ttcttcttgc
     3361 cctcgtacgg gttggtaccc tcgcggaaga tgaagctcac cggggtgccg atcagcttga
     3421 agcgcttgcg gaagaagttc tccaggtagc gcttgtacga ttcctgcagc tccttcaggc
     3481 gcgtgccgtg cacaatgaag gtcggcgggt ttgctccggc cgggtgcacg taacgcagct
     3541 tggagacgtg gccgcggatg gtcggcggcg ggttggtctc gtacgccact tccagcgcct
     3601 tgttcacttc gctggtggtg aaggtcttgt tggccgactc gtgcgcgcgg tgcacggcac
     3661 ggaacagctc gcgcaggccc gagccatgct tggccgagat gcgtaccgat tcggcccacg
     3721 gcacgaagcc cagcttcagc gacagcagcg tctcggcctg ctcgcgctgg tactcggtca
     3781 ggccatccca cttgttgatg gcgatcacca gcgcgcggcc ggcatcgagc acggcgccga
     3841 gcacggtggc atcctggtcg gtcacgcctt cggtggcatc cagcatcagc acggccacct
     3901 ggcactgctc gatcgactgc atggtcttga ccaccgagaa cttctcgacg acctcgtcca
     3961 cgcgcgagcg gcggcgcagg ccggcggtat cgatcaggcg gtactcgcgg ccgtcacgct
     4021 ccaagtccac cgcgatcgag tcgcgagtgg tgcccggcac gtcggaggcg atcatgcgct
     4081 cctcgccgag gatgcggttg accagcgtcg acttgcccac gttcgggcgg ccgacgaagg
     4141 cgatgcggat gcggttcgga tcgttgtcca gctcttcgcc gctgccttct tcgggcaggc
     4201 gctggatcac ttcgtccagc aggtcgtcca ggccctggcg atgcgcggcc gacacggtca
     4261 gcatctcgcc gaagccgtaa cgggcgaatt ccgaacgcac gctgtcctcg tcggtgccgt
     4321 cgatcttgtt gatcagcagc agcgtcgggc gcgacaactt gcgcagccag gccaggatct
     4381 catcgtccat cgccgacgta ccctcacggg cgtcgaccac gaacaggatc aggtccgctt
     4441 ccgccgcagc ggcgcgggcc tggcgggtgg tggcaccggc caggccctct tcctcttccg
     4501 cgataccgcc ggtgtcgacg acgaggaaat ggttgtcctc gtccagacgg cagacaccgt
     4561 agttgcggtc gcgggtgacg ccgggctggt catggaccag cgcgtcacgg gtgcgcgtca
     4621 gcgcattgaa aatagtcgac ttgccgacat tcggccgtcc aaccagggcg accaaaggca
     4681 gcatcgcgat tactccaatt tttagtttgc caaccggaag gcggtcagct tgccatcaac
     4741 gttctgtacc agcagcaccc cgtctgcgac gaccggctgg gccagcaggg cgtcaccgcc
     4801 gctcttcgcc cgtgccgcca tcgcaccatc ggaggtcttc aaccagtgca cgtatccctt
     4861 gtagtcaccg acgaccacgt aatcaccctg cagcaccggg ccggtcagcg aacgacgcgc
     4921 cagctcggtc tgcgaccaca tggccgcgcc ggtcgccttg tccaggccga acacgccgcc
     4981 cttgttgtcg gtgacgaaca cattgccgga cgacaccgcc acgccaccgg caccgccatg
     5041 gtcgcgcgcc cacagcgggc gaccggtcgg gccttcgatg gccatggtct ggttcttgaa
     5101 gctgctcacg tagagggtgt tgccctccag taccggagca ccgtcaacgt cggccatgcg
     5161 ctcaagctcg gtacggcctt cgccgttgcc gatgttctgt tcccacaggg tgcggccatc
     5221 ctgctgggcc agggccgcaa ccgcgccctc gtccttgccg atgaacagca cgcccgggcc
     5281 ggtgaccacc ggcgcgttgc cgcgcacggt cagcgccggc agttcgctcg ggttgaacca
     5341 cttctgggtg ccgttgccgg catcgaaggc ggtcacgcgg ccatcgttgc tgcgcacgaa
     5401 caccaggccc tgggccacgg ccggtgcagc aatgacttca cccggaacgc gggcgcgcca
     5461 cttctcgctg ccgtcgttga tgtccagggc gatgacctgg ccatccagcg tgccgatcac
     5521 gaccaggttc tcaccgacac ccgggccgcc ggacaggcgc agcttcggct tcttcttttc
     5581 cttctgcggc tcccaggtcc agaccttctt gccggtctgc aggtcgatgg cgtgcacgcc
     5641 accggtgatc gccgcggcga acacgtggcc gttggccacc gccgggccct ggcgcacgcc
     5701 gatgcggcgc tcgcccttgc cgaggttgac cgaccaggcc ttgttgacct tgacgctcgg
     5761 ttcgaacttg accagttcag ccggctcctg ggccttcttc gctgccgcgt ccttgccggc
     5821 gaaccagccc ttcacggtgc tgcagccggt cagggccatg cccatcagga gcacggtggc
     5881 gacgcgggtg atcatgacct tctgactcat caaaccgact ccgcaggggc ggcgaccgtg
     5941 ccgccggcat ccataacctt ggtttccagc aggcgccgct gcggcgctgc cacgtccagc
     6001 gacttcagcg ccttctcgta ctgtgcacgg gcgtcgtcac gcttgccctg cgccatcagc
     6061 gcatcgccat ggatttccag gctgctgctg tcggcggcgc tgcccagcag cttgatcgcc
     6121 tcgtcgctct tgccggtggc caccagcagg cgggccacgc gctggtcgac cacgcgctgc
     6181 aggtcacctt cgaccttcac gccgcgcagg gtggccagcg cctcttcgtt cttgccggcg
     6241 tcgacctggg ccttggccag ctgcagcgcc gcgaggtcgc cgtagatgct ggacgggccg
     6301 gcttcaagcg ccttcacggc cttggaggca tcgtcgagct tgttctgctg caggccgagc
     6361 agcgccttct ggtactcgac attggccgag gccaacttgc cgccctgatc cttctggtac
     6421 cactgccagc cggcgatggc accgatggcg atgaccacgc caccaaggat gctggcgcca
     6481 ttcttccgca gccagctgcg gacgcgttca ctttgttcgt gctcgtcgag cagatcgtcg
     6541 atcgccatgc gtactctcgc cccgcccatc gggagggacc attgggttta atcgaaggtg
     6601 gtgaaaccgc gcctcagtgc gaaaccggga ctacggagcc ttcagaggat acctgaaagc
     6661 gtgccacgtt ggctcgctgg tagggggtca gatcgacgat agcgccgttc tgctgaacct
     6721 ggaccgccga ggcgttgccc agggtcaccc gggtcacctg gcccggggtg aagctgcggc
     6781 tttcgccgga cttgatcagt gccttctcga cggtggcacc gtccgggccg ccgatatcga
     6841 cccagctgtc gccgctgaac tgcatgtcca gcgtgttggc ggcggcggcc ggcgccgggg
     6901 ccgaacgcgg caccggggcc agcgaggcca cgtacggggt cgcggccggc ttgctggccg
     6961 ggacgctcgc cacgtcaacc ggggtggccg gctcgacgcc ggcggcggac ggagccaccg
     7021 gcaccgcagc cgggatcgcg tccagcgagg cggtgttcgg cgacggggtg gcgctaccgt
     7081 cgaagtggcc acgggtggca aaccacaccg gcacggccag gaccgcggtg atgccgacat
     7141 agagcatgcg ccggccgagg ttctcggcaa tgcggcgcgc gcgcggggta tgggtatggc
     7201 tgaccagggt gggcgggacc accgggccga cctgggcctg ctccagcagc tggctcacat
     7261 ccacgttgag caggcgcgca tagctgcgca gctggccacg cacgaacacc ggcgcgccga
     7321 gcttctgcca ttgttcctct tccagcgact tgaccacctg gaccggcatg cgcaggcgcg
     7381 tgccgacatc ctcgagggtc agtccggccg cttcgcgggc ctggcgcagg cgggtgccgc
     7441 agccggccgc agtctcgaga gcgctcacag tctggtcatc aatcacaatg catcaaccct
     7501 ggagttagga gcccgcttcc tgcggaaatt cctgtcgaat ccgctggaga tagcgatcag
     7561 atgccgcccg atcgcccagc cgcgcttcga tttgagacgc aagttgtaac acggaacgcg
     7621 ttgcgggtgc agccgcaatc ctacgttcgg cgaaggcccg ggcctccatg tagcggccct
     7681 ggcggaagct gagctgggcc atcgcctcga gtgcgaccgg gttgtcaggc agtgtcgtca
     7741 gcgccgcgcg aaggtcgcgt tcggcacgtt cgaactggcc ggcatccagt gcgcagccgc
     7801 ccgcattggc ctgtgcctcg gctggcgtgg catagcccgg cgcctgcagt gcgcggtcga
     7861 accagaccag tgactcggcc ggccggccct gctggcacag ccaggcaccg taattgttga
     7921 gaatgtcgcc gcgctgcggc gccagttcgg cggccctgcg gaagctctcg ccagcctgcg
     7981 gggtgcggcc acggcgctca tcgatgccgg ccagcagcac cagcgcgtcc ggggcctccg
     8041 gcgccagctt ctgcgcctca cgggccttgc gctcggccgc atcgaggttg ccgacctgca
     8101 tgtcgcgggc agccagcgcc agcagatcct gccagcgcac ctggcggcgg acgttgtccg
     8161 gatcgcggac cgagtacacc ggcgccaggc tggggcccag cttggccttg ggttgggatt
     8221 tacagccgcc gaccgagagg gccagcacgc ctgcgaacag ggccagccag aggcggtcag
     8281 gccgcggcat cgctcccctt ccccgcctgc agcgtcttgt tgaactccgc ctggcggcgg
     8341 gtgcggtcca tcacctggcc cttgagctgg ccacaggcag catcgatgtc gtcgccacgg
     8401 gtacgccgga ccatggtcag cacgttgctg tcgagcagga tcttctggaa ggcacgaatg
     8461 tgcgcttctt ccgaacgctc gtagcgggtg cccgggaacg ggttgaacgg aatcaggttg
     8521 accttgcccg aatccttggc ctgcaccgcg ttgtcgaact ggcgcatcag gcgggccaat
     8581 tcacgggcat gctcgggctt gtcgttgatg cccttcatca gggtgtattc gaaggtgacc
     8641 gattcgcggc gcttgttggc gcgcaggtag cgtgcgcacg aggccatcag ctcggcgatc
     8701 gggtacttct tgttgagcgg caccagggtc tcgcgcagcg catcgttggg cgcatgcagc
     8761 gacaccgcca gcgacacgtc gctttcggcc gacaggcgat cgatctgcgg caccaggccg
     8821 gaggtcgaca gggtcacgcg cttgttggcc aggccgtagc ccaggtcgtc gcgcatcacg
     8881 ctcatggcgc gcacgacatt gtcgaaattc atcagcggct cgcccatgcc catcatcacc
     8941 acgttggtga ggcggcgcat ctggtgcggc acgttgccca ggtggcgtgc ggcaacccac
     9001 acctggccga tgatctcggc ggtggtcagg ttgcggttga agccctgggt ggcggtggag
     9061 cagaacgtgc agttcaggcc gcaaccgacc tgcgaggaca cgcacagcgt gccgcgggtc
     9121 ttgtcgggga tgtacacggt ctcgatggcg ttcttgccat ccacgcccat cgccagcagc
     9181 cacttgtggg tgccgtcggc ggagggcttg tcgaacacga tgttcggaac cagcacctcg
     9241 gcatgggcct gcagcttggc gcgcaggacc ttgccgaggt cggtcatttc atcgaagtcg
     9301 gtgacgtagc gatggtggat ccacttcatc acctgatggg cacggaactt cttctcgccg
     9361 agaacctcga cgaaaaactt ctccaggccc gcgcgatcga ggtcgagcag gttctgcttg
     9421 ccagccgtgg gtgccgactt cggcagcggc tggatggcgg gggactgtac gacctcgttc
     9481 acggcattac tctcagcgcg agacgacttc ggtggcggcg aagaagtagg cgatttcaat
     9541 cgcggcattc tcgaccgagt ccgagccgtg ggcggcgttg gcatcgatgg attcggcgaa
     9601 gtcggcgcgg atggtgcccg cagcggcttc cttcgggttg gtggcgccca gcaggtcgcg
     9661 gtgggccagg acggcgttct cgccttccag ggcctggatc atcaccgggc cggagatcat
     9721 gaactcgacc agcgcgttga agaacggacg ctcgcggtgc acggcgtaga agccttcggc
     9781 ttcacggcgc gacagctgct tgtacttggc ggccacgacc ttcaggccgg ccttctcgaa
     9841 gcgggcgtag atttcgccga tgacgttctt ggcaacggcg tccggcttga tgatcgaaag
     9901 ggtgcgctcc agcgccatgg gatgtctcca atggaatcgg gccgctgatg gcccgaaggg
     9961 taacatgaaa aaaacccgcg tcgggacgcg ggcttagcct gataaacgta ggcgaattgt
    10021 aaaagat
//
LOCUS       DAOKIP010000146         9940 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.146,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000146 DAOKIP010000000
VERSION     DAOKIP010000146.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 9940)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9940)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9940
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.146"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(138..1268)
                     /locus_tag="QEL58_002915"
     CDS             complement(138..1268)
                     /locus_tag="QEL58_002915"
                     /inference="COORDINATES: protein motif:HMM:NF022745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3103 family protein"
                     /protein_id="HDS1677363.1"
                     /translation="MIGGTTLLALLLASAGAAAQGDAAARGAQMQAVTEASAREVAGL
                     IAQPGFAEAVRTTLAASPERGVALDAVMERFDPGVRTQASVSLTSNDQQLRRAKGLPA
                     QGAGLLQLRAYVPDGQSLADIAPRQLWVASLPRGNDRDWTTLTAYDAQGRAHVLDARQ
                     APAFPVLIVDVDTRRSVQEGMALVNAGLRARGLQSPERIQLSADGARASLDITRLDRI
                     RLADDQEPWALGAAEVFAVVSGLQIGKAEPEMATVDMPYLDHDKTDYTPQQALVLWGN
                     YRFNAANVQLFEDDGDTNYQDLLVALSNGVKAALGAFAPEYAVIADIAGAILKAMPSS
                     WFSNDIDYLDSFYLVQRGQAYTDRMGAANNAKVTLTPITLVD"
     gene            complement(1455..2705)
                     /locus_tag="QEL58_002916"
     CDS             complement(1455..2705)
                     /locus_tag="QEL58_002916"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012480981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF819 family protein"
                     /protein_id="HDS1677364.1"
                     /translation="MPTEPATALISNDIVGLGLIAATLALIFWAASGPTPLLKKIFAW
                     VPALLLCYFIPAIYNTAGVIDGHNTSLYNPVARDVLLPAALVLLTLSIDLKGIAKLGP
                     KLLIVFCAGTAGIMLGAIVSFQLMKLIHPETVAGDTWAGMAALAGSWIGGGANMVAMR
                     EVFGTDATTFGQFAVVDVACASLWMAILLFLANRAQQIDTRNGADTRAIDEMKARISA
                     YEAQNARIPSMTDLMVIVGVALGGVGLAHAIAAPLSGWFKANISWASQFSLDSQFVWV
                     ILLSTAMGLGLSFTRARRLEAAGASRLGTVFLYFLIACIGMQMNLLSLLDRPWLFLLG
                     AIWMATHVLVLWIVAKLLRAPLFFFAIGSQGNIGAAASAPVVAAAFHPTLAPVGVLLG
                     TVGYATGTGLAYVTGLILKWMATG"
     gene            2840..3229
                     /locus_tag="QEL58_002917"
     CDS             2840..3229
                     /locus_tag="QEL58_002917"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HDS1677365.1"
                     /translation="MQLGAFSVSLSVKDLAASRAFYEALGFSVTGGDPAQNWLVLRSN
                     GTVIGLFQGMFEGNLLTFNPGWDQHRQELPHFQDVRELQAELDSKGIELAVRTDPEGQ
                     GTGYLQLADPDGNVMLIDQHVARPDRR"
     gene            complement(3277..4563)
                     /locus_tag="QEL58_002918"
     CDS             complement(3277..4563)
                     /locus_tag="QEL58_002918"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006383239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing histidine kinase"
                     /protein_id="HDS1677366.1"
                     /translation="MKARKPGPLYRRVVWWLLGYLALLSIAVFSVGNYVHEHAEHAAW
                     RALLNSELDSIVDHTEHEPHYRWQDSDTLSLFRFDEGNMPESVRTLHPGLHDGVPIKG
                     RQTAVMVRDTGSMGRVALALDISDFHDLEQFATRWVMLAGVIMIFVTVLMASFGMERM
                     VRPLSLLAQHIGALRPGVQGQRINVDPRGSSELHTIADALNDYLDRNEQFVERERVFI
                     STASHELRTPIAVMTGAAELALEQPGLPDRARQQMQRVLRTAQSVEQLIELLLVLARD
                     PARLAARAERIALDQLLPEIVDDHRHLLGDKDLSIGIQAAPVDIVAPLAVVQAAIGNL
                     LRNAIENSGRGHIELRLSSSAVLTLQDPGHGMSPEEIAAIHARMARGDRADRGGGIGL
                     DLIARLCEHLGWTLRLQPCEARGTRATLDFSASRPT"
     gene            complement(4550..5263)
                     /locus_tag="QEL58_002919"
     CDS             complement(4550..5263)
                     /locus_tag="QEL58_002919"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005418278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDS1677367.1"
                     /translation="MRLLVIEDNRQLVANLFDYFESRGHVLDVAPDGITGLHLAGSHP
                     YDAVILDWMLPRMEGPEVLRRLRAEHASEVPVIMLTARDELPDKIAGFRAGADDYLTK
                     PFALPELEVRLEALLLRAQGRNPRRRLQVGDLVLDLATLEAQRGSQVLHLYPACRKLL
                     EVLMRASPGAVTRQQLEFALWGDEPPDGDLLRSHVYELRRSVDGPFADKLIHTLPRVG
                     YRLAVTSASDPARDDDEGA"
     gene            5394..7097
                     /locus_tag="QEL58_002920"
     CDS             5394..7097
                     /locus_tag="QEL58_002920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HDS1677368.1"
                     /translation="MPVALPRRWRLPLLWLLIIAALAAGIGMRQPQPPDEPRFVLAAR
                     TMVESGQWLLPHRGVELYAEKPPVFMWLQAAAYEVVGSWQWSFLLPSLLGALLSLWLV
                     SDLARRLWSPRHSLYAVAALFCTLQFGLMAKRAQIDMVLVGMTTVALWGLMRHLCERR
                     NLPALWLAGFAAGVGTVTKGVGFLPLLMVLPWFGWWLYQRRRGHVVEGPHPASLLWLI
                     PAFLLGVGVWLAPLGWALLHAPSAELQAYAHELLFKQTGTRYANAWHHRQPVWYYLQV
                     ILTLWLPGSLLLPLLFKPWWRRLRRGDRRQWLLLGWALLVLVFFSASPGKREVYLLPM
                     LPAMALAVAPLLPGLLRRLCVRRYLFGYSVVLMLATGVLGVMLMTEHPWAVAQLERRA
                     MPDTLLPVLGDGLLTFAIALATLIVWLRLRRAATLVLLTHGMLWMLYGLVLIPALDPY
                     ASASALMRRVGTRIGPDAELALVAWREQNLLQADRPVREFGFKRPWPEQWHDAGPWLA
                     EAPDKRWLLVLDDAMSPCVDPAKVIDIGVANRNRWQLLPGTAWDPQCHAERAGSTAEE
                     D"
     gene            7209..7961
                     /locus_tag="QEL58_002921"
     CDS             7209..7961
                     /locus_tag="QEL58_002921"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019338647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HDS1677369.1"
                     /translation="MPVRPIDSVAPLATSPLASRFAVTHLWLPVAIGLPVFALLMGFG
                     GDQWVADHLFRLEGGHWALQDAWVTRTLVHKAGKWMSTAAALVAILLCFHHWRKGRDR
                     TLRWALLYVVVAMALGTGVISLLKSLVPMECPWDLLRYGGHQPFIGLFTLRPAGMAPQ
                     ACFPAGHASAGYAWLCLYFFALLWRPSWRWAGLWIGLGSGLVFGISQQLRGAHFLSHD
                     VATALTCWLLSLGLYVLIRRQLDRPHRQEANA"
     gene            7958..9607
                     /locus_tag="QEL58_002922"
     CDS             7958..9607
                     /locus_tag="QEL58_002922"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019338648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoethanolamine transferase"
                     /protein_id="HDS1677370.1"
                     /translation="MSASVQRSTRLPALASVLRWRPQLSTEALIALTSLFFAVAGNGL
                     FWHSAMASHPGSLRYALSLLLLLLGTHGVLLGILVWRWNAKVVISLLLLVTAFAAHYM
                     SRYHIYLDADMLRNVLATDPKESRELMTVSLVWPVLLLAVLPMVVLWRVQLRRRSWSR
                     SLLWRLGFLVVAAVTAVGGALISFQDVSALMRNQREVRYLATPANVLLGMPRALRGDN
                     PVQRAPKLPIGTDAKATPRAPASKPRLLVIVMGETVRAQNWGLNGGRNTTPELAQAPV
                     INFPDMHSCGTSTEVSLPCLFSPWGRHDYDEKKIRAHQSLLHVLNRAGIAPLWRDNQS
                     GCKGVCEGLDFQSLSDATTPGLCADGRCMDEILLQDLATQVRAKPGDRVVVLHQLGNH
                     GPAYFERYPPAFRRFTPTCDTRDIGRCSREEITNSYDNAVLYTDHFLSKTIGTLQGLQ
                     DYDTAMIYLSDHGESLGEKGLFLHGVPYAIAPAEQTRVPMTMWFSQGFASSRGLDLQC
                     VRKRSAAYADHDNLFPSVLGLMQVKTSLYERDRDVFANCES"
BASE COUNT         1593 a         3375 c         3263 g         1709 t
ORIGIN      
        1 tgcggcgacc aagcccccat ggatgggttt acggcgtccc cgcacaccca cagtgccccg
       61 ccaacccacg gaatgccgct tcggcttttg acgttgccgt tgattgaagc gggtgcaggg
      121 ctgcaagccc tgccgaccta atccaccagg gtgatggggg tcagcgtgac cttggcgttg
      181 ttcgctgctc ccatgcgatc ggtgtacgcc tgcccgcgtt ggacaagata gaagctgtcc
      241 aggtaatcga tgtcgttgga aaaccacgac gacggcatcg ccttgaggat cgcgccggca
      301 atatcggcga tgaccgcata ctccggtgcg aacgcaccca gcgctgcctt cacaccgttg
      361 ctcaacgcca ccagcaggtc ctggtagttg gtgtcaccgt catcctcgaa caactgcacg
      421 ttggcggcgt tgaaccgata gttgccccac aggaccagcg cctgctgcgg cgtgtagtcg
      481 gtcttgtcat ggtccaggta gggcatgtcg accgtggcca tctccggctc cgccttgccg
      541 atctgcagcc cggacaccac cgcgaacacc tccgccgcgc ccagtgccca cggctcctgg
      601 tcgtcggcca ggcggatgcg gtccagccgg gtgatgtcca gtgatgcacg cgcgccatcg
      661 gccgacagct ggatgcgctc gggcgattgc aggccccgtg cgcgcaggcc ggcgttgacc
      721 agcgccatgc cttcctgcac cgagcggcgg gtatcgacat cgacgatcaa gaccgggaat
      781 gccggtgcct gccttgcgtc cagcacatgc gcgcggccct gcgcgtcgta ggccgtcagc
      841 gtggtccagt cacgatcatt gccccgtggc aggctggcca cccacaactg gcgcggcgcg
      901 atgtcggcca gcgactggcc gtccggcacg taggcgcgca gctgcagcag ccctgcgccc
      961 tgcgctggca agcccttggc ccggcgcagc tgctgatcgt tgctggtcag cgagacgctg
     1021 gcctgggtgc ggacgcccgg gtcgaagcgc tccatcacgg catccagtgc cacgccccgt
     1081 tccggtgagg ccgccagcgt ggtgcgcacg gcctcggcga agccgggttg ggcaatcaat
     1141 cccgccacct cacgcgcact ggcctcggtt acggcctgca tctgggcacc acgcgcggca
     1201 gcatcgcctt gcgcagctgc cccggcgctg gccaacagca gtgccagcag cgtggtcccc
     1261 ccaatcatcc gtcgatgcgt cataccagcc cccaggcaac gtcgctgcgg atgagcgaca
     1321 ggtgctgtct acgctacgtc gcgatcacca tacgatccgg catgtaccgc acagttccgc
     1381 ctgcggcctg caaaaaaaag agccgagcat cggctcggct ctacacagga tcgcgatgcc
     1441 aggcgtggcc cggcttagcc ggtggccatc cacttcagga tcaagccggt gacatacgcc
     1501 aggcccgtac cggtggcata gcccaccgtg cccagcagta cacccaccgg ggccagcgtg
     1561 gggtggaaag ccgccgccac cacgggggcc gatgccgccg caccgatgtt gccctgcgaa
     1621 ccgatcgcga agaagaacaa cggtgcgcgc agcagcttgg caacgatcca gagcacaagc
     1681 acgtgcgtgg ccatccagat cgcacccagc aggaacagcc acggacgatc cagcagcgac
     1741 agcaggttca tctgcatgcc gatgcaggcg atcaggaagt acaggaacac cgtgcccagc
     1801 cgggaggcac ccgccgcttc cagccggcgt gcacgggtga agctcaggcc caggcccatt
     1861 gcggtggaca gcaggatcac ccacacgaac tggctgtcca ggctgaactg gctggcccag
     1921 ctgatgttgg ccttgaacca gcccgacagc ggcgccgcga tcgcatgggc caggccgacg
     1981 ccgccgagcg ccacgccgac gatcaccatc aggtcggtca tgctgggaat gcgcgcattc
     2041 tgcgcctcgt aggcactgat gcgggccttc atctcgtcga tggcgcgggt atcggcaccg
     2101 ttgcgggtgt cgatctgctg cgcacggttg gccaggaaca gcaggatcgc catccacagg
     2161 ctggcgcagg ccacgtcgac caccgcgaac tgtccgaagg tggtggcatc ggtaccgaac
     2221 acttcgcgca tcgcgaccat gttggcgccg ccgccaatcc agctgccagc cagtgcggcc
     2281 atgccggccc aggtgtcgcc ggccacggtt tccgggtgga tcagcttcat cagctggaac
     2341 gagacgatgg cgccgagcat gatgccggcg gtaccagcac agaacacgat cagcagtttc
     2401 ggaccgagct tggcgatgcc cttgagatcg atcgacaggg tcagcaggac cagcgcggca
     2461 ggcagcagca catcacgtgc gaccgggttg tacagcgagg tgttgtggcc gtcgatgaca
     2521 ccggcggtgt tgtagatggc ggggatgaag tagcacagca gcagtgccgg cacccaggcg
     2581 aagatcttct tcagtaaggg ggtcggaccg ctggcagccc agaagatcag ggccagggtt
     2641 gcggcaatca ggcccagtcc aacgatgtcg ttgctgatca gggcagtagc gggttcggtc
     2701 ggcatgggat cctctgtcga tcgaaagagc gggaaaaaaa agcgccgcat gaagcggcgc
     2761 aggttgagat taacattgtc ttcacgccgg gtcatgctgc agtgccgacc acgaccccat
     2821 cccctccggg agcctcctca tgcagctcgg cgctttctcg gtcagcctct cggtgaagga
     2881 cctggcggcc tcccgcgcgt tctacgaagc gctgggcttc tcggtcaccg gtggtgaccc
     2941 cgcacagaac tggctggtac tgcgcagcaa tggcacggtg atcggactgt tccagggcat
     3001 gttcgagggc aacctgctca ccttcaatcc cggctgggac cagcacaggc aggaactgcc
     3061 ccacttccag gacgtacgtg aactccaggc cgagctggat tcgaagggca tcgagctggc
     3121 agtacgtacc gaccctgagg gccagggcac cggctacctg cagctggccg atcctgatgg
     3181 gaatgtgatg ctgatcgacc agcacgtggc gcgcccggac aggcgataac acgtacagca
     3241 tgccaaccaa ggttggcatc taccaggaca gccggatcag gtcgggcgcg aagcgctgaa
     3301 atccagggtg gcgcgcgtac ctcgcgcttc gcagggctgc agccgcaggg tccatcccag
     3361 gtgttcgcac aggcgcgcga tcaggtccaa gccgatgccc ccaccgcggt cggcgcggtc
     3421 gccccgggcc atgcgcgcgt gaatcgcggc gatctcctcc gggctcatgc cgtgccccgg
     3481 gtcctgcagg gtgagcactg ccgacgaact tagtcgcagt tcgatatggc cacggccgct
     3541 gttctcgatg gcgttgcgca acaggttgcc gatcgccgcc tgtaccaccg ccaacggcgc
     3601 aacaatatcc accggcgcgg cctggatgcc gatgctcagg tccttgtcgc caagcaggtg
     3661 gcggtggtca tcgacaatct cgggcagcaa ctggtccagc gcgatgcgct cggcgcgagc
     3721 ggccagtcgc gccggatcgc gtgccagcac cagcagcagc tcgatcagct gctcaacgct
     3781 ctgcgccgta cgcagcacgc gctgcatctg ctggcgcgcc cgatccggca ggcccggttg
     3841 ttccagtgcc agttccgcgg cgccggtcat caccgcgatc ggcgtgcgca gctcatggct
     3901 ggcggtactg atgaacaccc gctcacgctc gacgaactgc tcgttgcggt ccaggtagtc
     3961 attcagcgca tcggcgatgg tatgcagctc ggaactgccg cgcgggtcca cgttgatgcg
     4021 ctgcccctgc acacccggcc gcagcgcgcc gatatgctgg gccagcaggc tcagcggacg
     4081 caccatccgc tccatgccga acgaagccat cagcacggtg acgaagatca tgatcacccc
     4141 ggccagcatc acccagcgcg tggcgaactg ctccaggtca tggaagtcgg agatgtccag
     4201 cgccagcgcc acccgcccca tcgagccggt gtcgcgcacc atcacggcgg tctgccgccc
     4261 cttgatcggt accccatcgt gcagccccgg gtgcagcgtg cgcacgctct cgggcatgtt
     4321 gccctcatcg aaacggaaca ggctgagcgt gtccgagtcc tgccagcggt aatgcggctc
     4381 gtgctcggta tggtcgacga tgctgtccag ttcggagttg agcagcgcgc gccaggccgc
     4441 atgctcggcg tgctcatgca cgtagttgcc gacgctgaac accgcgatcg acaacagcgc
     4501 caggtagccc agcaaccacc acaccacgcg ccggtacagc gggcccggct tacgcgcctt
     4561 catcgtcatc cctggccgga tcgctggccg aagtcacggc cagccggtag ccgacccgcg
     4621 gcagcgtgtg gatcagcttg tcagcgaacg ggccatcgac gctgcggcgc agttcgtaga
     4681 catgcgaacg caacaggtct ccatccggtg gctcgtcacc ccataaagcg aattccagct
     4741 gctggcgggt gaccgcaccg gggctggcac gcatcagtac ttccagcagc ttgcggcagg
     4801 ccgggtacag atgcagtacc tggctgccgc gctgcgcctc cagggtggcc aggtccagca
     4861 ccaggtcgcc cacctgcagc cgcctgcgcg gattgcggcc ctgcgcacgc agcagcagcg
     4921 cctccagccg cacctccagc tcgggaaggg cgaacggctt ggtcaggtag tcgtcggcac
     4981 cggcgcggaa gccggcgatc ttgtccggta gctcgtcacg tgcggtcagc atgatcaccg
     5041 gcacctccga ggcgtgctcg gcgcgcaggc ggcgcagcac ctccggcccc tccatgcgcg
     5101 gcagcatcca gtccaggatc accgcatcgt aggggtggct gccggccagg tgcaggccgg
     5161 tgatgccatc cggggccacg tccagcacat gcccgcgcga ctcgaaatag tcgaacaggt
     5221 tggccaccag ctggcggttg tcctcgatca ccaacagacg catgcacgaa acatccacgg
     5281 aagttcgtaa catggtagcg ctgcccatgt cggaatgcgg tcgccttggc cacctccgac
     5341 gcttttccca cccccgccgc ctcagaatgg ctgttttgct cccggagccc gccgtgcccg
     5401 tagccctgcc ccgtcgttgg cgcctgcccc tgctgtggct gctgatcatt gccgcgctgg
     5461 cggccggtat cggcatgcgc cagccgcaac caccggacga gccccgcttc gtgctggctg
     5521 cccgcaccat ggtcgagagc gggcaatggc tgctgcccca ccgtggcgtc gagctgtatg
     5581 cggaaaagcc tccggtgttc atgtggctgc aggcggcggc ctacgaggtg gtgggcagct
     5641 ggcaatggtc attcctgctg ccctcgctgc tgggtgccct gctcagcctg tggctggtct
     5701 cggacctggc gcggcgcctg tggtcccccc ggcattcgct gtacgccgtg gctgcgttgt
     5761 tctgcaccct gcagttcggc ctgatggcca agcgcgcgca gatcgacatg gtgctggtgg
     5821 gcatgaccac ggtggccctg tggggcctga tgcgccacct gtgcgaacgc cgcaacctgc
     5881 ccgccctgtg gctggccggt ttcgccgccg gtgtcggcac ggtaaccaag ggcgtgggtt
     5941 tcctgccgct gctgatggtg ctgccctggt tcggctggtg gctgtaccag cgtcgccgtg
     6001 gccatgtggt ggagggcccg catccggcca gcctgctctg gctcatcccg gccttcctgc
     6061 tgggcgtggg agtgtggctg gcaccgctgg gctgggccct gctgcatgcg cccagcgccg
     6121 agcttcaggc ctacgcgcat gagctgttgt tcaagcagac cggcacccgc tacgccaacg
     6181 cctggcatca ccgccagccg gtctggtact acctgcaggt gatcctcacc ctgtggctgc
     6241 caggcagcct gctgctgccg ctgctgttca agccgtggtg gcgccgcctg cgccgtggcg
     6301 accgccggca gtggctgctg ctgggctggg cgctgctggt gctggtgttc ttcagtgcca
     6361 gcccgggcaa gcgcgaggtc tatctgctgc cgatgctgcc ggcgatggcg ctggccgtcg
     6421 caccgctgct gccgggcctg ctgcgccggt tgtgcgtgcg ccgctacctg ttcggctaca
     6481 gcgtggtgct gatgctggcc accggcgtgc tcggcgtgat gctgatgacc gaacacccgt
     6541 gggcggtggc gcagctggag cgccgggcca tgcctgacac cctgctaccg gtgctcggcg
     6601 acggtctgct gaccttcgcc atcgccctgg ccacgttgat cgtatggctg cggttacggc
     6661 gcgctgcgac actggtgctg ctgacccacg gcatgctgtg gatgctgtac ggactggtgc
     6721 tgattccggc gctggatccc tatgcatcgg cctcggcgct gatgcgccgg gttggcacac
     6781 ggatcggccc cgatgccgaa ctggcgctgg tggcctggcg cgaacagaac ctgctgcagg
     6841 ccgaccgccc ggtgcgcgag ttcggcttca agcgcccctg gcccgagcaa tggcacgatg
     6901 ccggcccgtg gctggccgaa gcgccggaca agcgctggct gctggtactg gacgatgcga
     6961 tgagcccctg cgtggaccca gccaaggtga tcgacatcgg cgtggcaaac cgcaatcgct
     7021 ggcagctgct tccgggtacc gcctgggacc cgcaatgcca tgccgagcgg gccgggtcga
     7081 ccgccgaaga agactgaacg ttggctcgtg ccgggcaaac attaacccgg cacgaacgag
     7141 cgtccgaccc ttctccgaca tccaggtgac gagcatggcc gcggattccc gaaccgccct
     7201 ttcccagcat gcccgtccgt cccattgatt cggtagcgcc gcttgcgaca tcgccgctgg
     7261 cgtcaagatt tgccgtaacc cacctctggc tgcctgtcgc catcggcctg cccgtgttcg
     7321 cgctgctgat gggcttcggt ggcgatcagt gggtcgccga ccacctgttc cgccttgagg
     7381 gtggccactg ggcgttgcag gacgcctggg tcacccgcac gctcgtccac aaggccggca
     7441 agtggatgag cacggcagcc gcgctggtgg cgatcctgtt gtgcttccac cattggcgca
     7501 agggccgtga ccggaccctg cgctgggcgc tgctctatgt cgttgttgcc atggcgttgg
     7561 gcaccggagt gatctccctg ctgaagtcgc tggtgccgat ggaatgcccg tgggacctgc
     7621 tgcgctatgg cggccaccag cccttcatcg gactgttcac gctgcgcccg gccggcatgg
     7681 caccgcaggc gtgtttcccg gccgggcacg ccagcgcggg ctacgcctgg ctttgcctgt
     7741 acttcttcgc cctgctgtgg cggccgtcgt ggcgctgggc ggggttgtgg atcggcctgg
     7801 gcagcggcct ggtgttcggc atcagccagc agctgcgcgg tgcgcacttc ctttcgcatg
     7861 acgttgccac ggccttgacg tgctggctgc tttcgttggg cctgtatgtc ctgatccgcc
     7921 gtcagctgga ccgtccccac cgccaggagg caaacgcatg agcgcatcgg tccaacgctc
     7981 tacccgcctg ccggccctgg caagcgtcct ccgctggagg ccgcagctgt ccaccgaagc
     8041 actgatcgcg ctgaccagcc tgttcttcgc ggtggccggc aacggcctgt tctggcacag
     8101 cgcgatggcc agccatccgg gcagcctgcg ctacgccctt tcgctgctgc tgttgctgct
     8161 gggtacgcac ggcgtactgc tcggcatcct ggtctggcgc tggaacgcca aggtggtgat
     8221 cagcctgctg ctgctggtga ctgcattcgc cgcgcactac atgagccgtt accacatcta
     8281 cctggatgcg gacatgctgc gcaacgtgct ggcgaccgac cccaaggaaa gccgcgaact
     8341 gatgacggtg tcgctggtgt ggccggtgct gctgctggcg gtgctgccga tggtggtgct
     8401 gtggcgggtg cagctgcgcc gccgcagctg gagccgcagc ctgctgtggc gcctcggctt
     8461 cctggtggtg gccgcagtga ccgcggtcgg cggcgcgttg atctcgttcc aggacgtctc
     8521 ggcgctgatg cgcaaccagc gcgaagtacg ctatctcgcc accccggcca acgtgctgct
     8581 gggcatgccg cgtgcactgc gtggcgacaa tccggtgcag cgcgcgccga agctgccgat
     8641 cggcaccgac gccaaggcca ccccgcgtgc gccggccagc aagccgcgcc tgctggtgat
     8701 cgtgatgggc gagaccgtgc gtgcgcagaa ctggggcctc aacggcggcc gcaacaccac
     8761 gccggaactg gcgcaggcgc cggtgatcaa cttcccggac atgcactcgt gcggtaccag
     8821 caccgaagtc tcgctgccgt gcctgttctc gccatggggg cgacacgact atgacgagaa
     8881 gaagatccgc gcgcaccagt cgctgctgca cgtgctgaac cgtgccggca tcgcaccgct
     8941 gtggcgtgac aaccagtccg gctgcaaggg cgtgtgcgaa ggcctggact tccagtcgct
     9001 gtccgacgcg accacgccgg ggctgtgtgc cgatggccgc tgcatggatg agatcctgct
     9061 gcaggacctg gccacccagg tgcgcgccaa acccggtgac cgggtggtgg tgctgcacca
     9121 gctgggcaac cacggcccgg cctacttcga gcgctatccg ccggcattcc gccgcttcac
     9181 cccgacctgc gacacccgtg acatcggccg ctgctcgcgc gaggagatca ccaacagcta
     9241 cgacaatgcc gtgctgtaca ccgatcactt cctgagcaag acgatcggca cgctgcaggg
     9301 cctgcaggac tacgacacgg cgatgatcta cctgtccgac cacggcgagt cactgggcga
     9361 gaagggcctg ttcctgcatg gcgtgcccta cgccatcgcc ccggccgagc agacccgcgt
     9421 gccgatgacg atgtggttct cacagggctt cgccagcagc cgcgggctgg acctgcagtg
     9481 cgtgcgcaag cgttcggcgg cctatgccga ccatgacaac ctgttcccgt cggtgctggg
     9541 cctgatgcag gtgaagacct cgctgtacga gcgcgaccgc gacgtgttcg ccaactgcga
     9601 gagttgaggg ttgttaggca gggcttgcag ccctgcacct gctcaatgca aaggcaacgg
     9661 ccaaagcaag agcggcattc cgtgggttgg cggggtgggt ccggttgagg gggacgccgt
     9721 aaatacgtcc atgtaggctc ggtcgccgca tccatgcggc tcacgccccc tcaaccggac
     9781 ccaccccgcc ttcgacagtt ttccgcaatc tgttggagcg gcagtctgct ctggtgggtg
     9841 tcgaccttgg tcgacacggt ggatctgatt caaatttgat ttttcgatat ctgacagatg
     9901 tgtcgaccaa ggtcgacacc taccggcagt acacggaatc
//
LOCUS       DAOKIP010000147         9912 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.147,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000147 DAOKIP010000000
VERSION     DAOKIP010000147.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 9912)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9912)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9912
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.147"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(84..677)
                     /locus_tag="QEL58_002923"
     CDS             complement(84..677)
                     /locus_tag="QEL58_002923"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019662140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel family protein"
                     /protein_id="HDS1677371.1"
                     /translation="MMLSLKDHLPPWTHPWLNYAGVALQIVLVLLVAWLLRLLARRLI
                     RRFAEHYTLPPEMVMGARRITSFVVYFSALLYILSLLGAKPSVLWTAFTGFAAVGAVA
                     FFAAWSVLSNIFCTLLIFTTRPFRLHDYIEVLENGEKPGLKGRVIDVNLIYTTLQETG
                     DGHEGTVLQLPNNLFFQRTVRRWRDPAQAPGGIQGDG"
     gene            complement(712..891)
                     /locus_tag="QEL58_002924"
     CDS             complement(712..891)
                     /locus_tag="QEL58_002924"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019337007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677372.1"
                     /translation="MSSPSCAALLVIAACVLLQALGLSLQLRPDNGRACLQQHRQELV
                     CLAWTPAVESPARAG"
     gene            1018..1596
                     /locus_tag="QEL58_002925"
     CDS             1018..1596
                     /locus_tag="QEL58_002925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019662138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HDS1677373.1"
                     /translation="MLDTTMPAPPAANDTVDEPALVRAAAAGDTAAYELLYRRHAPRV
                     FAVLWRLCGGQQARAEDALQEAFLQAWKALPGFRFESSLSTWLHRLGVNAALMELRGR
                     AAGQDHDSLDEVDGGLQELAVHDRCAGTERDLERALSTLPPRARAVLVLHDIEGWKHQ
                     EIAEQLQMAVGSSKAQLHRARGLLRARLGDMT"
     gene            1593..2132
                     /locus_tag="QEL58_002926"
     CDS             1593..2132
                     /locus_tag="QEL58_002926"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005418171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677374.1"
                     /translation="MTTHDHDSDSDSALLARLRALSSERSVPADGWERLSARLPPREP
                     PSAPAADGTVVALPMRPRRRWWLPVGAALAASLAVYAVAPWRHAQPDMPAPSALQLQA
                     AAMTEQYQQAVASLPDGRAPEWQPALHELDESAAQIRAALAQDPRAPHLLGQLKRTYA
                     LRLELTRQAAYAAESGLAT"
     gene            2143..3024
                     /locus_tag="QEL58_002927"
     CDS             2143..3024
                     /locus_tag="QEL58_002927"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005414223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4097 family beta strand repeat protein"
                     /protein_id="HDS1677375.1"
                     /translation="MTRTLISCCVALLLAPSLALADTRIDERHTLAAGGRIELSNVAG
                     KVTVRGWDRNDVQLTGTLSDGLQLRQEKSANRVRWEIEYPRRNGNGGATLVLNVPRSV
                     ELLLSTVSASQDISGIDVRRLQADTVSGSLSAAGRSGDSKLNTVSGSVSARLQTPKLD
                     VNTVSGRIEAGGGVSGDIGAQTVSGRVEVDAGRVQRLAVETVSGSIELAAAGLAPGGR
                     INVESVSASVTLSLPRTVSAQLSVNSFSGSINSDAGQVERPRYGPGSHLDTRLGGGDG
                     DIRIQSHSGSVQVRLDR"
     gene            complement(3074..3256)
                     /locus_tag="QEL58_002928"
     CDS             complement(3074..3256)
                     /locus_tag="QEL58_002928"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677376.1"
                     /translation="MPRKAKTPAKASNSIRSERKGAAASTVVSSDSIASDLAAFRKAG
                     GKIEVLGTTWALKKAS"
     gene            complement(3268..3561)
                     /locus_tag="QEL58_002929"
     CDS             complement(3268..3561)
                     /locus_tag="QEL58_002929"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008268341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YkgJ family cysteine cluster protein"
                     /protein_id="HDS1677377.1"
                     /translation="MDCRRCDAVCCRLPVLLQPGDQVPGQFLSRDAHGRAVMARNEEG
                     WCAAIDPYHLRCTIYSQRPAICRQFSMGGDDCRRERQDYLRQADAWSLSSPST"
     gene            complement(3791..5152)
                     /locus_tag="QEL58_002930"
     CDS             complement(3791..5152)
                     /locus_tag="QEL58_002930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005418167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp70 family protein"
                     /protein_id="HDS1677378.1"
                     /translation="MRLGIDFGTSNSAAAIVHEGKLLPIRFGDAEQFRTSVYFPGVVP
                     DPDDFQLDDGQEHQLQQMIDSAARAARAAGQERTPQALRREALRALRREWMEARAGQE
                     RSASDLLQNAVYGDEALEAYFEEHEGNLVQSPKSMLGYNLHPRARQTITGIAAHILEH
                     IRLTASAQLGRPLRAALLGRPVQFRSSIGAAGNDQALDILREAATQAGFDQIDFLEEP
                     AAAAMHYHAESRERHQAVIVDIGGGTTDIAHAEVGGDDAPRIHRAWGIARGGTDIDLA
                     LSLSSYMPLFGRGITRVPTHHYVEAATVQDMTRQRDFRLHKYDHVDAPWGDRLQALQD
                     TGNTARLYRDVERAKIALSAASEHRSTLDYIARDLHADSSADGLASAAHGYLEQIREL
                     LAQVRSDIGGDPDAVFLTGGMSRAGYLRQAVAEAFPGARMVHGEPSLGVVQGLALAAA
                     SQD"
     gene            5321..5656
                     /locus_tag="QEL58_002931"
     CDS             5321..5656
                     /locus_tag="QEL58_002931"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003489493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkylphosphonate utilization protein"
                     /protein_id="HDS1677379.1"
                     /translation="MSSAPACPQCTLENTYADGALWICADCGFEWTAEESAGSTLVVR
                     DSNGNTLRTGDTVTVIKDLKVKGSSIPLKQGTVIRNIRLVEDDAEHIEGNSDKIKGLV
                     LKTCFLKKA"
     gene            complement(5664..6815)
                     /locus_tag="QEL58_002932"
     CDS             complement(5664..6815)
                     /locus_tag="QEL58_002932"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019337001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine-peptide
                     N-acetylglucosaminyltransferase"
                     /protein_id="HDS1677380.1"
                     /translation="MYRPSVPCLALSLLALCAPAFGADPAPPATLVTTPTITVSAPRV
                     PTPEEVFAIPADLRAMLQKQVIQRSYSRDQRLQALVEMIFDQHGLNLQYDANATYTVS
                     EIWQHRQANCLAFTLLFVTLAREAGIQARVQEVGQVVSWYQDQQNGVVYNVGHVNAGV
                     DVGGRFGTVDLDRNVLYDRRGPVPVSRARALAHFYNNRGAEYLAEGDLVGARAFFDAA
                     LAQDSGFAPVWNNVGVLDHRAGDNEGARQALDRSLQLDGRQDAALTNASALFRSLGLT
                     AQAQALERRLTSVQREDPFAQYMLGAKAERAGQLDAAIRYYRQAVRLYDTAHQFHFGL
                     ARVYFLAGQLKRADREMLRAQELGGAQEQARYQAKLDSLARWRAQQARR"
     gene            7045..7647
                     /locus_tag="QEL58_002933"
     CDS             7045..7647
                     /locus_tag="QEL58_002933"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012480948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677381.1"
                     /translation="MDFQPLTLAPAQWQALQDSYATPPRAYHHFGHVRAVLQHCQQVA
                     DGPGWQQPAEVYLAALYHDAIYQAGRKDNEARSAQLALQAIAQAPELAAVDAARVEQL
                     ILLTARHGELGPGDVDAEAALFLDCDMAILAAPEPVFAAYDRGVAEEYTGVVPGFLYR
                     AGRRRFLQGLLRAPRIFLSDFFHQRLDAAARDNLRRQLGR"
     gene            7697..7870
                     /locus_tag="QEL58_002934"
     CDS             7697..7870
                     /locus_tag="QEL58_002934"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase-like protein"
                     /protein_id="HDS1677382.1"
                     /translation="MSVPDPDPRPLPPEEPGPNECCGSGCPLCVLDLYADELQRYRKA
                     LAEWQARHPDVAP"
     gene            7867..8484
                     /locus_tag="QEL58_002935"
     CDS             7867..8484
                     /locus_tag="QEL58_002935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014038052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF998 domain-containing protein"
                     /protein_id="HDS1677383.1"
                     /translation="MSRARPAAMLALVALLLFVVTALWTQFARTDLDWVRATLSLYLH
                     GPWGLALRAAYCLLALAIAVLGIALYRGSIGPRRSAAAPLLFTVSALGLATVAIGDSW
                     LPEATPLLAPFIHGLAANTAFLCASVGMLLQAWYLRREPGWQSAAGLLWGWAWLAFVL
                     LWLHVLWRAGPPRGLGQKVVIAVIVGWLLYLALALYRRSRRPAPC"
     gene            8563..9909
                     /locus_tag="QEL58_002936"
     CDS             8563..9909
                     /locus_tag="QEL58_002936"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005414229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="virulence factor family protein"
                     /protein_id="HDS1677384.1"
                     /translation="MKRAGLGRAMVVVLALAALPAMAAANVQQFSHGRFEQIPVHMPS
                     GTPQRVVIWFHEPSAGGDTSRLPIEALRADGAMVAAVDIAHLRGVLKREGDPTCSFGS
                     GDVENFSRWLQASLHLPGYHLPLVGGDGEGAEMAYSLAAQADTQVFAGLLTTGFCPDH
                     SHERMVCGDGVKRNRLQPAELNFPWLSAAGDHGCKVGEASGFVQQVAMAREFKRTARG
                     DASPGLVAAARVMGAQAGVSLAPPPAALKGLPVVEVPAAGNGDTLAVFVSGDGGWAGL
                     DKDVASSLNEHGVAVVGIDSLRYFWSERTPKGFAADLQKIIDHYRQQWHRDKVMLIGF
                     SQGADVLPATINQLDADTRAALDRIVLLSVGKKADFEFHVSNWLGGGGDGLPIAPEVA
                     KLPAGKTLCVYGQDDDDALCPGLPANDGVQKVKLPGDHHFNGDYDRLAEVILKGGA"
BASE COUNT         1512 a         3220 c         3580 g         1600 t
ORIGIN      
        1 ccccgccatc ccacaggaag ccagcctttg acgttgacgt tgcctcggcg ggtgcagggc
       61 gcggccctgc aaagaaaacc ccctcagccg tcgccctgga tcccgccggg agcctgcgcc
      121 gggtcgcgcc agcgacgcac cgtgcgctgg aagaacaggt tgttcggcag ctgcagcacc
      181 gtgccctcgt ggccatcacc ggtttcctgc agcgtcgtgt agatcaggtt cacgtcgatc
      241 acccggccct tcagcccagg tttctcaccg ttctccagca cctcgatgta gtcgtgcagg
      301 cggaacggac gggtggtgaa gatcagcagc gtgcagaaga tgttggacag cacgctccag
      361 gccgcgaaga aggccaccgc gcccaccgcg gcgaagccgg tgaaggcggt ccagagtacc
      421 gacggcttcg cgccgagcag gctgaggatg tacagcaggg cactgaaata gaccacgaag
      481 ctggtgatcc ggcgtgcgcc catcaccatc tccggcggca gcgtgtagtg ctcggcgaag
      541 cggcggatca ggcgacgggc gagcagacgc agcagccagg cgaccagcag caccagcacg
      601 atctgcaggg cgacgccggc gtagttcagc caagggtggg tccagggcgg caggtggtct
      661 ttcagcgaca acatcatggg gcgactacgg cggggggaac ggcccccgat gttacccggc
      721 gcgtgcgggg gattcgaccg ccggggtcca ggccaggcag accagctcct ggcgatgctg
      781 ctgcaggcag gcgcggccgt tgtcggggcg aagctgcagc gacagcccca gcgcctgcag
      841 caggacgcag gcggcgatca ccagcagggc agcgcaggat gggctggaca tggcaggact
      901 cccggacggc attttcgcga aggaccttgc atggatgcag tggccgtcga aaaggttgca
      961 ggggatcgat cgtggatggg ctctaaacct tttcccgggc cgccgcatcc aagcgatatg
     1021 ctcgacacca ccatgcccgc gccgcctgcc gccaacgaca ccgtcgacga acccgccctg
     1081 gtgcgggcgg cggccgctgg cgataccgcc gcctacgaac tgctgtaccg gcgccatgcg
     1141 ccccgcgtat ttgcggtgct gtggcggctg tgtggggggc agcaggcgcg tgccgaagat
     1201 gcgctgcagg aggccttcct gcaggcctgg aaggcgctgc cggggttccg tttcgagagc
     1261 agcctgtcga cctggctgca tcggctgggg gtcaatgccg ccctgatgga actgcgtggg
     1321 cgcgcggccg ggcaggacca cgacagtctg gatgaggtcg acggcgggtt gcaggaactg
     1381 gcggtgcatg accgctgtgc cggcaccgag cgcgacctgg agcgcgcgct gtcgacgctg
     1441 ccaccacggg cacgtgcggt actggtactg cacgatatcg aaggctggaa acaccaggaa
     1501 atcgccgagc agctgcagat ggctgttggc agttccaagg ctcagttgca tcgtgcgcgc
     1561 ggtttgttgc gtgcacggct gggagacatg acatgacgac acacgaccac gattccgatt
     1621 ccgattccgc gctgctggca cgcctgcgtg ccctgtccag cgaacgcagc gtgcccgccg
     1681 atggctggga gcgcctgtcg gcccggctgc caccgcgtga accaccgtcg gcgcctgcag
     1741 cggatggcac tgtggtggcc ctgcccatgc gtccgaggcg gcgctggtgg ctgccggtgg
     1801 gcgcggccct ggcggccagc ctggcggtgt atgcggtggc gccgtggcgc catgcgcagc
     1861 ctgacatgcc ggcgccgtcc gcgctgcagc tgcaggccgc ggcgatgacc gagcagtacc
     1921 agcaggccgt ggcttcgctg cccgatggcc gggcgccgga atggcaaccg gccctgcacg
     1981 aacttgatga aagtgccgcg cagatccgcg ccgcactggc acaggaccca cgtgcgccgc
     2041 acctgcttgg ccagctcaag cgcacctatg cgctgcgtct ggaactgacc cggcaggcgg
     2101 cctatgccgc cgagtccggc ctggcaacct gaggagaccc ccatgacccg aaccctgatt
     2161 tcctgctgtg tggcgctgtt gctggcaccc tcgctggcgc tggccgacac ccgtatcgac
     2221 gaacgccaca cgctggccgc cggcggtcgc atcgaactga gcaacgtcgc cggcaaggtg
     2281 accgtgcgcg gctgggaccg caatgatgtg cagctcaccg gcacgctcag tgacggcctg
     2341 cagctgcgcc aggagaagag cgccaaccgc gtgcgctggg agatcgagta cccgcgccgc
     2401 aacggcaacg gtggcgccac gctggtgctg aatgtgccgc gctcggtgga actgctgctg
     2461 agtacggtca gcgccagcca ggacatcagc ggcatcgacg tgcgccgcct gcaggccgat
     2521 acggtcagcg gcagcctgag cgcggccggg cgcagtggcg acagcaaact caacacggtc
     2581 agcggcagtg tcagtgcgcg cctgcagaca ccgaagcttg acgtcaacac ggtcagtggc
     2641 cggatcgagg ccggtggcgg cgtatccggt gatatcggtg cgcagaccgt ctccggccgg
     2701 gtcgaggtgg acgccgggcg ggtgcagcgg ctggcggtgg aaaccgtgtc gggcagcatc
     2761 gagctggcag cggccgggtt ggcaccgggt ggccgcatca acgtcgaatc ggtgagcgct
     2821 tcggtcacgc tgagcctgcc gcgcacggtg tcggcgcagc tgtcggtgaa cagcttcagc
     2881 ggttcgatca acagcgatgc cgggcaggtc gagcggccgc gctacgggcc gggcagccac
     2941 ctcgacacgc ggctgggcgg cggtgatggt gacatccgca tccagtcgca ttcgggcagt
     3001 gtgcaggtac gcctggatcg ctgagcgcgg tccggcaggc cgcggcggca gcgccgccgc
     3061 ggtcggtact gggtcagctg gctttcttca gcgcccaggt ggtgccgagg acttcgatct
     3121 tgccaccggc cttgcggaac gcagccaggt ccgaagcgat cgaatcactg ctgaccacgg
     3181 tgctggcggc cgcgcccttg cgttcgctgc ggatgctgtt gctggccttc gcgggggtct
     3241 ttgccttgcg gggcatggtt gctcctgtca ggtggaaggg gaggaaagcg accaggcatc
     3301 agcctggcgc aggtagtcct gccgctcgcg gcggcagtca tcgccgccca tcgaaaactg
     3361 gcggcagatc gccgggcgct gcgaatagat cgtgcagcgc aggtgatagg gatcgatcgc
     3421 cgcgcaccag ccttcctcgt tgcgtgccat cacggcacgg ccgtgggcgt cgcgcgaaag
     3481 gaactggccg ggcacctggt cgccgggctg cagcagcacg ggcagccggc aacagaccgc
     3541 gtcacaacgg cggcagtcga tgggtgcagg tgctgcgtca ggttgtaagg cctctggggc
     3601 ctggcgggtg cccaaagcgg gtctcgatgg cggctccggt ggtacgcgga ccatgaacga
     3661 gccaggaagg catggtcgct aggcccgcag ggcgggccgg gctgcacgga agacacgcac
     3721 cggcgtggcc ggtggaaggt gcagctgggt tctagccgac caagggtaac ttagaccgcg
     3781 taacgttttg ttaatcctgg ctggctgcgg ccagcgcaag gccctggacc acccccagcg
     3841 agggttcgcc gtggaccatg cgggcgcccg ggaaggcctc ggccacggcc tggcgcaggt
     3901 agccggcacg ggacatgccg ccggtcagga acaccgcgtc cggatcgcca ccgatatcgc
     3961 tgcggacctg ggccagcagc tcgcggatct gctccaggta cccatgcgcg gcggaggcca
     4021 ggccgtcggc gctgctgtcg gcatgcaggt cgcgggcgat gtagtccagc gtgctgcggt
     4081 gttcactggc ggcgctcagg gcgatcttcg cgcgttcgac atcgcggtac aggcgcgcgg
     4141 tgttgccggt gtcctgcagg gcctgcaggc ggtcgcccca gggcgcgtcc acatggtcgt
     4201 acttgtgcag gcggaaatcg cgctgccggg tcatgtcctg cacggtggcc gcttccacgt
     4261 agtggtgggt gggcacgcgg gtgatgccgc ggccgaacag cggcatgtag ctggacaggc
     4321 tcagcgccag gtcgatgtcg gtaccaccac gggcgatacc ccaggcgcgg tggatgcgcg
     4381 gtgcgtcgtc gccgccgact tcagcatgcg cgatgtcggt ggtaccgccg ccgatgtcga
     4441 cgattaccgc ctggtgccgc tcgcggcttt cggcgtggta gtgcatggcc gccgccgccg
     4501 gctcttcgag gaaatcgatc tggtcgaagc cggcctgggt ggcggcctcg cgcaggatgt
     4561 ccagtgcctg gtcgttgccg gccgcgccga tcgaactgcg gaactgcacc gggcggccga
     4621 gcagggcggc acgcagcggg cggccaagct gtgcgctggc ggtcaggcgg atgtgttcaa
     4681 ggatgtgcgc ggcgatgccg gtgatggtct gcctggcgcg cgggtgcagg ttgtagccca
     4741 gcatcgactt cgggctctgc accaggttgc cttcgtgttc ctcgaaatac gcttccagag
     4801 cctcatcacc gtagaccgcg ttctgcagca ggtcgctggc gctgcgttcc tggccggcac
     4861 gggcttccat ccactcgcgg cgaagcgcgc gcagggcttc gcggcgcagc gcctgtggcg
     4921 tgcgttcctg gccggcggca cgcgctgcgc gggcggcgct gtcgatcatc tgctgcagct
     4981 ggtgttcctg gccgtcgtcg agctggaagt cgtccgggtc gggcaccacg ccggggaagt
     5041 acacgctggt gcggaactgc tcggcgtcgc cgaagcggat cggcagcagt tttccctcat
     5101 gcacgatggc ggcggcggag ttgctggtac cgaagtcgat gccgaggcgc atggggagtt
     5161 ccggggacga tcaggggtcg cgcactctgc tgcagttcgc taccaactgc aagttccagc
     5221 gccttgtgga ggggggaccg ccggcgcccc tccgaaggaa tgggaaaaag ggccggccgg
     5281 ttacaatggc gcctgttgat tcattttgag gtacttgccg atgtcgtccg cccccgcctg
     5341 cccgcagtgc accctggaaa acacctatgc cgatggcgcg ctgtggatct gcgccgactg
     5401 cggcttcgag tggaccgccg aggaaagcgc cggttcgacc ctggtcgtgc gtgacagcaa
     5461 cggcaatacc ctgcggaccg gcgacaccgt caccgtgatc aaggacctga aggtgaaggg
     5521 ctcctcgatc ccgctgaagc agggcacggt gatccgcaac atccgcctgg tcgaggacga
     5581 tgccgagcac atcgaaggca actcggacaa gatcaagggg ctggtcctga agacgtgttt
     5641 cctcaagaag gcctgaccgg acctcagcgc ctggcctgct gcgcgcgcca gcgcgccagg
     5701 ctgtccagct tggcctggta gcgtgcctgc tcctgggccc cgcccagttc ctgcgcgcgc
     5761 agcatttcgc gatcggcacg cttgagctgg ccggccagga aatagacccg tgccagcccg
     5821 aagtggaact ggtgcgcggt gtcatacaga cgcaccgcct ggcggtagta gcggattgcc
     5881 gcatccagct ggcccgcacg ctcggccttg gcgccgagca tgtactgcgc gaacgggtcc
     5941 tcgcgctgca ccgacgtcaa ccggcgctcc agcgcctgcg cctgcgcggt caggcccagg
     6001 ctgcggaaca gggccgaggc attggtcagc gcggcatcct ggcgtccatc cagctgcagc
     6061 gacctgtcca gcgcctgtcg tgcgccttcg ttgtcgcctg cgcgatggtc gagcacgccg
     6121 acgttgttcc agactggagc gaacccgctg tcctgggcca gcgctgcgtc gaagaacgcg
     6181 cgtgcgccta ccaggtcacc ttcggcaagg tactcggcgc cgcggttgtt gtagaaatgc
     6241 gccaaggccc gcgcacggct gaccggaacc ggcccgcgcc ggtcgtagag cacgttgcgg
     6301 tcgaggtcga cggtaccgaa acgcccgccg acgtcgacgc cggcattgac gtgcccgacg
     6361 ttgtagacca cgccgttctg ctggtcctgg taccacgaca ccacctgtcc cacttcctgc
     6421 acgcgggcct ggatgccggc ttcgcgggca agcgtcacga acagcagggt gaaggccagg
     6481 cagttggcct ggcggtgctg ccagatctcg ctgacggtgt aggtcgcatt ggcgtcgtac
     6541 tgcaggttca gcccgtgctg gtcgaagatc atttccacca gcgcctgcag gcgctggtcg
     6601 cgggagtagc tgcgctggat cacctgcttc tgcagcatcg cgcgcaggtc cgccggaatg
     6661 gcgaacacct cctccggcgt cggcacgcgc ggagccgaca cggtgatggt cggagtggtc
     6721 accaacgttg caggcggcgc cgggtccgcg ccgaaggccg gcgcacagag ggcgagcagc
     6781 gaaagggcca ggcaagggac ggaaggacgg tacatgacag ctcccggcag cggcgggcgc
     6841 tcccgcctgt ggcgagtgta gacccaggga tgttccgctg ctgcgaccgt tggtcggcgt
     6901 cgcggttcat ccacaaccgg tgtggaccag cgctcgacaa agctgtggac aaccgcgccc
     6961 aggccgcgcc cggcaagcgt tgtgagtgcg tggtgaaaaa acagccagct tgcccgctgc
     7021 caacgcaggc gggatgatcc gggcatggac ttccaacctc tgacgcttgc cccggcgcag
     7081 tggcaggcgc tgcaggacag ctatgcaacg ccgccacgcg cctaccacca ctttggccac
     7141 gtgcgtgccg tgctgcagca ctgccagcag gtggctgatg gcccgggctg gcagcagccg
     7201 gccgaggtct atctggccgc gctgtaccac gatgcgatct accaggccgg gcgcaaggac
     7261 aacgaggcac gctcggcaca gttggccttg caggcaatcg cgcaggcacc ggaactggcc
     7321 gccgtcgatg cggcccgggt cgagcagctg atcctgttga ccgcccgcca tggcgagctc
     7381 ggcccgggtg atgtcgatgc cgaggccgcg ctgttcctgg actgcgacat ggcgatcctg
     7441 gccgcgccgg aaccggtgtt cgccgcctac gaccggggcg tggccgagga gtacacgggc
     7501 gtggtgccgg gcttcctgta ccgggccggg cgccggcgtt tcctgcaggg cctgctgcgc
     7561 gcgccacgca tcttcctcag cgacttcttc caccagcgcc tggatgccgc ggcccgcgac
     7621 aacctgcgcc ggcagctggg ccgctgagcc cgcccggtac actgggggct gtttccaccg
     7681 atcaccgttt ccgaccgtgt ccgtccctga tcccgatccc cgcccgctgc caccggaaga
     7741 gcctggtccc aatgaatgct gcggcagtgg ctgcccgctg tgcgtgcttg acctgtatgc
     7801 cgatgagctg cagcgctacc gcaaggcgct ggccgagtgg caggcgcgac acccggatgt
     7861 ggcgccatga gccgcgcacg tccggcggcg atgctggcac tggtggcgtt gctgctgttc
     7921 gtggtcactg cgctgtggac ccagttcgcg cgcaccgacc tggactgggt gcgggccacg
     7981 ctcagcctct acctgcatgg gccgtggggg ctggcactgc gcgcggcgta ctgcctgttg
     8041 gcgctggcca tcgcggtgct gggcatcgcg ctgtatcgag gaagcatcgg cccgcggcgc
     8101 agcgcggccg cgccgctgct gttcaccgtg tccgcactgg gattggccac cgtcgccatc
     8161 ggtgacagct ggctgcccga ggcaacgccg ctgctggcac cgttcatcca tgggctggcg
     8221 gccaacaccg cgttcctgtg tgccagcgtc ggcatgctgc tgcaggcctg gtacctgcgc
     8281 cgcgaaccgg gctggcagtc cgccgctggc ctgctctggg gctgggcgtg gctggcgttc
     8341 gtgcttctct ggctgcacgt gctgtggcgc gccgggccgc cgcgtgggct ggggcagaag
     8401 gttgtgattg cggtgatcgt gggctggctg ctgtacctgg cgctggcgtt gtaccgccgc
     8461 agccgccgcc ccgcgccctg ctgaaccccc aacggcctgc gccggtacgt gccgtgcacg
     8521 cggtggcggc gtatcgtgtg cgcattccat cggggctgcg atatgaagcg tgcagggctg
     8581 ggcagggcaa tggttgtggt actggcgctg gctgcgctgc cggcgatggc ggcggccaac
     8641 gtgcagcagt tcagccacgg gcggttcgaa cagattccgg tgcacatgcc gtcgggaacg
     8701 ccgcagcggg tagtgatctg gttccatgaa ccttctgccg gcggtgatac cagccgtttg
     8761 ccgatcgagg cgctgcgtgc cgatggcgcg atggtcgcgg ccgtggacat cgcgcatctg
     8821 cgcggcgtgc tcaagcgcga gggtgacccg acctgctcct ttggttccgg cgatgtcgag
     8881 aacttctcgc gctggctgca ggcgtcgctg catctgcccg gctaccacct gccgctggtc
     8941 ggcggcgatg gtgaaggtgc cgaaatggcc tactcgctgg cggcgcaggc cgatacccag
     9001 gtattcgccg gcctgctcac caccggcttc tgcccggacc acagccacga acgcatggtc
     9061 tgcggcgatg gcgtgaagcg caacaggttg cagcccgccg aactgaactt cccgtggttg
     9121 agtgcggccg gtgatcacgg ctgcaaggtg ggcgaggcca gcgggttcgt gcagcaggtg
     9181 gcgatggcgc gcgagttcaa gcgcaccgcg cgcggtgacg cctcgccggg gctggtggct
     9241 gcggcgcggg tgatgggagc gcaggcaggt gtcagcctgg caccgccacc ggctgcgctg
     9301 aagggcctgc cggtggtgga agtgcctgca gccggcaacg gcgacacgct ggccgtgttt
     9361 gtctccggcg acggtggctg ggccggcctg gacaaggacg tggcgtcgtc gctcaacgag
     9421 cacggcgtgg cggtggtcgg catcgattcg ctgcgctact tctggagcga gcgcacgccg
     9481 aagggctttg ctgcggacct gcagaagatc atcgatcact accgccagca gtggcaccgc
     9541 gacaaggtca tgctgatcgg attctcgcag ggcgccgacg tgctgccggc caccatcaac
     9601 cagctcgatg cagatacccg cgcggcactg gaccgtattg tgctgctgtc ggtgggcaag
     9661 aaggccgact tcgagttcca tgtcagcaac tggctgggcg gcggcggtga cggcctgccg
     9721 atcgcgccgg aagtggcgaa gctgccggct ggcaagacgt tgtgcgtgta tgggcaggac
     9781 gacgatgacg cgttgtgccc gggccttccc gccaacgatg gcgtgcagaa ggtgaagctg
     9841 ccgggcgacc atcacttcaa tggtgactac gaccgcctgg ccgaggtgat cctcaagggt
     9901 ggcgcctgac gc
//
LOCUS       DAOKIP010000148         9912 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.148,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000148 DAOKIP010000000
VERSION     DAOKIP010000148.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 9912)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9912)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9912
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.148"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(4..894)
                     /locus_tag="QEL58_002937"
     CDS             complement(4..894)
                     /locus_tag="QEL58_002937"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014647505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sterol desaturase family protein"
                     /protein_id="HDS1677385.1"
                     /translation="MKHWMLRLYAPLFLLGFVAAAVVWVGRLHGDPLWLLALLAVAIA
                     VSFAAERAWPYDPAFNHDQGDRLRDTLHALVNESLNLLSIAAVPLLAAIIPWQAWPVQ
                     WPFALQVLLAIVCADLGITLVHYASHRIGWLWRLHAVHHSVTRMYGFNGLMKHPLHQA
                     AEAVGGVLPLLVLGLPMPVAAVLAFAIAIQLLLQHSNVDMRPGVLGRVMAWAPLHRFH
                     HMRYGTAGDVNFGLFLTVWDHLLGTAFDAPGYRLRQRDLGIGSQPDYPCDYPGQLLAP
                     FRELPHGEVPELPEGLRRRG"
     gene            1025..1975
                     /locus_tag="QEL58_002938"
     CDS             1025..1975
                     /locus_tag="QEL58_002938"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDS1677386.1"
                     /translation="MAWIYNGALIAPGTGMDSFNLMRAFRRIVERGGLARAAEDLGMS
                     PAGLSKQLRTLETHLGVVLLQRTTRRMSLTETGHAYYRECCRLLDELDALERGIAEQR
                     GEVAGRLRVNAPQSFALSTLSPLLPRFLQQHPQLSLDLVMEDRLLDAVGEGFDVSLRL
                     RAELDDSRLVARRLASLQQVLCAAPSYLQQHPVPQAVDDLQAHSVLAYSLSDSPGSWP
                     LLGPDGQVTITLPARVTVNNSLMLRDLLVAGMGIGALPSFLAAPSLARGELQQVLPDH
                     RYPPRFVHAVYPTSRHLQPKVRAFIDFLHAELPACAGLDS"
     gene            2068..2718
                     /locus_tag="QEL58_002939"
     CDS             2068..2718
                     /locus_tag="QEL58_002939"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbA family protein"
                     /protein_id="HDS1677387.1"
                     /translation="MSSVSSPTAAAPVVDFFHDVVCGWCFVLAPRLQQVSAEFGIQVR
                     HRSFVLQDSRAQMVEVFGSMERAKAIILRHWTDCAAHEDSARIDIEGMRAQDFEYPSG
                     WLGALACQAAGMLGGNEAHGVMFDAVQWAHLHQHRNIGDAEVLLDIAEALGHPRGAFA
                     DHMRSDAVRQRVQADRAEAAALGIRSIPTVIGGNGLRLQTLPLPHLRQALAPLVAA"
     gene            2752..3759
                     /locus_tag="QEL58_002940"
     CDS             2752..3759
                     /locus_tag="QEL58_002940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012480589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclase family protein"
                     /protein_id="HDS1677388.1"
                     /translation="MTPRTLATALALLLAGTAASTSVTAHERVPSGQQVGTSPWGPKD
                     EIGRLNLITEASRAAILSRVSGGKAYDLATEYYVGMPSWQDAGDPHYQFWMTHTPRGT
                     VMDDPMGVGETMNLTRSYTGTAFSMYSHTGTHIDALNHFGIHGKIWNGFEADKHLGDR
                     GWNVTGIEKFPPLIARGVLIDVAGAKGVDMLPDSYRVTRQDLKDALARQQVKLQQGDI
                     VLIRTGRMRLFEQPRAYMANPPGMGLDAARFLVEDSGAMIVGADNLSFETFPSEVSDD
                     YVPLHTYLLAQQGAPIIELVALDELARDKVYEFAFIGGPLKIRGGDAAPLRPVALPVR
                     P"
     gene            4018..4632
                     /gene="imuA"
                     /locus_tag="QEL58_002941"
     CDS             4018..4632
                     /gene="imuA"
                     /locus_tag="QEL58_002941"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translesion DNA synthesis-associated protein
                     ImuA"
                     /protein_id="HDS1677389.1"
                     /translation="MGAVVALDRLLDGRQLWRGPARQGPASDHLASGHPALDARLPGG
                     GWPASGLCEVLQAAPGVGELALVWPALAKLSQRGRPIVLVAPPYRPHAPAWAAAGLDL
                     AQLQIIHAAPKQALWATEQCLRSAACAAVLCWPQQADDRALRRLQVAADSGQCLGFVF
                     REAQAARNPSPASLRLQLDHGQVRVLKCRGGLPPAQPLPLAISH"
     gene            4642..6051
                     /locus_tag="QEL58_002942"
     CDS             4642..6051
                     /locus_tag="QEL58_002942"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012511392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase Y family protein"
                     /protein_id="HDS1677390.1"
                     /translation="MNWACLLLPQLALDSVLRLQPDPQRPLVLLQGPAQRRVLRAVSP
                     AARAAGLRPGMLLSAAQVLVQDMHLHDYDPNAEQHTRQLLASWAYAYSSQVSLDFPHA
                     LVLEIGASRALFGDWLTIEKRLRGELHELGFRHRLVAAPTPHAARVLANVHDGLGLDA
                     QQLPAVLAQLPLPRCGLPSEAVTVLGRSGLRTLGAVLALPRDSLARRFAPDVLQQLDA
                     LRGQPTAPLRYYQPPDRFDARIEFEYEIESSQALLFPLRRLLLDLAAFLCSRDGGVQR
                     FDLHFEHDLLPPSVLTIGLLAPERDPALLFEIARNRMEAFALPAGSRALRLHAEQLPP
                     FVPAARDLFDTRPAQAMPWTQLRERLRARLGDDAVQPLAVQADHRPERASGTQPAVKP
                     PSYWPLRPGWLLDTPQPLRDPRLRIVAGPERIESGWWDQADARRDYYVVETAHGQRGW
                     AFRTRNDPHAPWMLHGWFG"
     gene            6058..9168
                     /locus_tag="QEL58_002943"
     CDS             6058..9168
                     /locus_tag="QEL58_002943"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="error-prone DNA polymerase"
                     /protein_id="HDS1677391.1"
                     /translation="MHSELPGYAELHCLSAFSFQRGASIAEELFARAAGQGYRALAIT
                     DECSLAGIVRAWQAAKTHGVALIVGAEFQVEDGPKLALLCTDQAAYAGLCQLITTCRR
                     RAAKGEYRCLRDDLLGLPDGLLCLWLDRQPAATDLELLRTGFNDRLWLAVELHHEHDD
                     AHRLQQLQAFGERHRLPLVASGDVHMHVRRRRALQDTLTAIRHRCSVAEAGWRLFPNG
                     ERHLRPRTALAQLYPPELLAETLRIAERCHFTLEQLQYTYPRELVPEGHDPDSWLRVL
                     VERGIPWRWKNGIEPAQRKQIEHELALIRQKNYASYFLTVQDIVRFARSQDILCQGRG
                     SAANSAVCFVLGVTEIDPARSNLLFERFISAERDEPPDIDIDFEHERREEVLQYVFKR
                     YGRERAALTAVAISYRGRSAIRDVARALGLPMDQVNELGAAMDHWGGHVPLPETLRER
                     GFDPKTPLMRRLLSLTAELIDFPRHLSQHPGGFVISEHPLSTLVPVENAAMADRTVIQ
                     WDKDDLDATGLMKVDCLALGMLTAIRKCLAMLQQHGLHSGRMDAIPDEDTPTYDMISA
                     ADTIGVFQIESRAQMAMLPRMQPRNFYDLVIEVAIVRPGPIQGDMVHPYLERRRLLRE
                     QGPEALDNLEEPLYPPQLERVFARTLGVPLFQEQVMQLAVDAASYTPGEADALRRSMA
                     AWKRRGGLEPHREKLLAGMLKNGFSREYGEHLFEQIKGFGDYGFPESHAASFALLTYA
                     SCWLKCHHPAAFTASLINSQPLGFYSPDQLLQDARRHGIGVLPLDVRHSDWDCTLDFS
                     KGPAAIRLGLRLVDGCNEPAVQAIMRERARRPFDDVGDLCQRTALDRRQQGLLADAGA
                     LRGLSGHRHRARWDISGVENRLPLFDHARATAEARVPLPLPSAWEDMQADYRSTGTTL
                     GRHPISFLRAQLRSRGCLDAAQLAGHGHGRRVRIAGLVRMRQRPQTASGVTFLTLEDE
                     TGMVNAVVWRHLADRQHRVLVDTQLMQIDGRLERVDGVQHVIVQRMHCLDELLQGLRS
                     HSRDFH"
     gene            9373..9879
                     /locus_tag="QEL58_002944"
     CDS             9373..9879
                     /locus_tag="QEL58_002944"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005417089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677392.1"
                     /translation="MPRALLLTTLVVATLALLVSGWTAWSLHRSQSPQRIIEARGLVI
                     HDESGQPRVILGAPVPDPLSQGRSQGPRATALSGLILLGPDGSERGGYGTSDRGGEAL
                     LTLDDATGTTEVFKVVANPDRGASLMVKHQNNTGAMLTSWQGKPELMFVDDSGQSYYV
                     RPGANAAP"
BASE COUNT         1571 a         3553 c         3231 g         1557 t
ORIGIN      
        1 ggatcatcca cgcctgcgca acccttcggg cagctccggt acctcgccat gtggcagctc
       61 acggaacggt gccagcagct gcccggggta atcgcacgga taatccggct ggctgccgat
      121 gcccagatcg cgttgccgca gccggtagcc cggcgcatcg aaggcggttc ccagcaggtg
      181 atcccagacg gtcaggaaca ggccgaagtt gacgtcgccg gcggtgccgt agcgcatatg
      241 gtggaaacgg tgcagcggcg cccacgccat cacccggccg agcacacccg ggcgcatgtc
      301 cacgttggaa tgctgcaaca gcagctggat ggcaatggcg aacgccagca ccgccgccac
      361 cggcatcggc aggcccagca ccagcagcgg cagcacaccg cccactgctt cggccgcctg
      421 gtgcagcggg tgtttcatca ggccgttgaa gccgtacatg cgggtgacgc tgtgatgcac
      481 cgcatgcagc cgccacagcc agccgatccg gtggctggcg tagtgcacca gggtgatgcc
      541 gagatcggcg cagacgatgg ccagcagtac ctgcagcgcg aagggccact gcaccggcca
      601 ggcctgccat ggaatgatcg ccgccagcag cggcaccgcg gcgatcgaca gcaggttcag
      661 gctttcgttg accagcgcat gcagggtgtc acgcaggcgg tcgccctggt cgtggttgaa
      721 cgcggggtca tacggccagg cacgctcggc agcgaacgag accgcgatgg cgaccgccaa
      781 caaggccagc agccatagcg ggtcgccgtg caggcggccg acccagacga cggcggcggc
      841 aacgaaaccg agcaggaaca acggggcata caggcggagc atccagtgct tcatgggcaa
      901 cccgaaacgt gaggggcctg catgctggcg cggcgcgacg gctgccggct tgaacaaacg
      961 gcgcaatccg gcgcgcgcct gctggatgcc catcctgatc ggcaccgcat tcccgcatcc
     1021 atgcatggcg tggatctaca atggcgccct catcgcgccc gggaccggca tggactcctt
     1081 caacctgatg cgtgccttcc gccgcatcgt cgaacgtggc ggcctggccc gtgccgccga
     1141 agacctgggc atgtcgccgg ccggattgag caagcagctg cgcacgctgg aaacccacct
     1201 gggagtggtg ttgctgcagc ggaccacgcg gcgcatgagc ctgaccgaaa ccggccatgc
     1261 ctattaccgt gagtgctgcc gcctgctcga cgagctggac gcgctggaac gtggcatcgc
     1321 cgaacagcgt ggcgaagtgg ccgggcggct gcgcgtcaat gcgccacagt cgttcgcgct
     1381 gagcacgctg tcgccgctgc tgccgcgttt cctgcagcag catccgcagc tgtcgctgga
     1441 cctggtgatg gaagaccgcc tgctcgatgc ggtcggcgaa ggcttcgatg tgtcgctgcg
     1501 gctgcgcgcc gagctggatg actcgcgatt ggtggcgcga cggctggctt cgctgcagca
     1561 ggtgctgtgc gcggccccgt cctacctgca gcagcatccg gtaccgcagg cggtggatga
     1621 tctgcaggcg cacagcgtgc tggcctacag cctgtccgac tcacccggca gctggccgct
     1681 gctcggcccc gatggccagg tgacgatcac cctgccggca cgcgtcaccg tcaacaacag
     1741 cctgatgctg cgtgatctgc tggtggccgg catgggcatc ggcgccctgc cctcgttcct
     1801 ggcggcgccg tcactggccc gcggcgaact gcagcaggtg ctgcccgacc accgctatcc
     1861 accgcgcttc gtgcatgcgg tctaccccac ctcacggcac ctgcagccca aggtgcgcgc
     1921 cttcatcgat ttcctgcacg ccgagctgcc cgcctgcgcc ggcctggatt cgtaaccccc
     1981 agcgaaaact gagctgcccg cggcgtgctg tttcagccac gccgcgctgc ctactctgcc
     2041 gcctcccctc tcaccgatgg caggccgatg tcttccgttt cttcccccac cgctgcagcg
     2101 ccagtggtcg atttcttcca cgacgtggtc tgcggctggt gcttcgtgct ggccccgcgc
     2161 ctgcagcagg tctcggccga gttcggcatc caggtgcgcc accgcagctt cgtgctgcag
     2221 gactcgcgcg cacagatggt cgaggtattc ggctcgatgg agcgcgccaa ggcgatcatc
     2281 ctgcgccact ggaccgactg cgccgcgcat gaagacagcg cgcgcatcga tatcgaaggc
     2341 atgcgtgcac aggacttcga atatccctcc ggctggctgg gcgcattggc ctgccaggcc
     2401 gccggcatgc ttggcggcaa tgaggcccac ggcgtgatgt tcgatgccgt gcagtgggcg
     2461 cacctgcacc agcaccgcaa catcggcgat gccgaagtgc tgctggacat cgccgaagcg
     2521 ctcggccacc cgcgtggtgc cttcgctgac cacatgcgca gcgacgcagt acgccagcgc
     2581 gtgcaggccg accgcgccga agccgctgca ctcggcatcc gttccattcc caccgtgatc
     2641 ggcggcaacg gcctgcgcct gcagaccctg ccgctgccgc acctgcgcca ggccctggcg
     2701 ccgctggtcg cggcctgagc cgcaccattc ccccctgcaa ggagattccc catgacccca
     2761 cgtaccctgg ccaccgcatt ggccctgctg ctggccggca ccgctgcttc cacctcggtg
     2821 accgcgcacg aacgcgttcc ttccggccag caggtcggca ccagcccctg ggggccgaag
     2881 gacgagatcg gccgcctcaa cctgatcacc gaggcgtcgc gcgcagcgat cctgtcgcgg
     2941 gtcagcggcg gcaaggccta tgacctggcc accgagtact acgtcggcat gcccagctgg
     3001 caggacgccg gcgacccgca ctaccagttc tggatgaccc acaccccgcg cggcacggtg
     3061 atggacgacc cgatgggcgt gggcgagacc atgaacctca cccgcagcta caccggcacg
     3121 gcgttctcga tgtacagcca caccggcacc cacatcgatg cgctgaacca cttcggtatc
     3181 cacggaaaga tctggaacgg cttcgaggcc gacaagcacc tcggcgatcg tggctggaat
     3241 gtcaccggca tcgagaaatt cccgccgctg atcgcgcgtg gcgtactgat cgacgtggcc
     3301 ggtgccaagg gcgtggacat gctgccggac agctaccgcg tcacccgcca ggacctgaag
     3361 gatgcgctgg cacgccagca ggtgaagctg cagcagggtg acatcgtgct gatccgcacc
     3421 ggccgcatgc gcctgttcga acagcccagg gcgtacatgg ccaacccgcc gggcatgggc
     3481 ctggacgccg cgcgcttcct ggtcgaagac agcggcgcga tgatcgtcgg cgccgacaac
     3541 ctcagcttcg agaccttccc ttcggaagtg tccgatgact acgtgccgct gcacacctac
     3601 ctgctggccc agcagggcgc gccgatcatc gagctggtgg cgctggacga actggcccgc
     3661 gacaaggtct acgaattcgc cttcatcggt ggtccgttga agatccgcgg tggtgatgcc
     3721 gcgccgctgc gcccggtggc gttgccggtc cgcccttaac cggggcctgt gggtgccgac
     3781 cttggtcggc attccgtccc atgccgggtg ggtgccgacc ttggtcggca ctcctttccc
     3841 ccttcagcaa cctgaaaccc gaccctccaa tttcattagt aattctactt acaacgcgag
     3901 tagcatgtct ggtctcagcc cctgataccg gcctgtcgat actcgctcca tgcccgccgt
     3961 ttccgcccat tcctgtcgcc cccagcccgc ccggcgcctc ccctggagga ccggctgatg
     4021 ggcgccgtcg tcgccctcga ccggctgctg gatggccgcc agctgtggcg cggcccggcc
     4081 cgccaagggc ccgccagcga ccacctggcc agcggccacc cggcactgga tgcacgcctg
     4141 cccggcggtg gctggccggc cagcgggctg tgcgaggtgc tgcaggcagc acccggcgtg
     4201 ggcgagctgg cgctggtctg gccggcgctg gcgaagttga gccagcgcgg acgcccgatc
     4261 gtgctggtcg cgccccccta ccgcccgcat gcaccggcct gggcggcggc cgggctggac
     4321 ctggcccagc tgcagatcat ccacgccgcg ccgaagcagg cgctgtgggc caccgaacaa
     4381 tgcctgcgtt ctgccgcctg cgccgcggtg ctgtgctggc cacagcaggc cgacgaccgt
     4441 gccctgcgcc ggctgcaggt cgccgccgac agcggccaat gcctgggctt cgtgttccgc
     4501 gaggcgcagg cagcgcgcaa cccctccccg gccagcctgc gcctgcagct cgaccacggc
     4561 caggtgcggg tactgaaatg ccgtggcggc ctgccgccgg cgcagccgtt gcccctggcc
     4621 atcagccact gaggccgcgc cgtgaactgg gcctgcctgt tgttgccgca gctggcgctg
     4681 gacagcgtgc tgcgcctgca accggacccg cagcggccgc tggtgctgct gcagggtccg
     4741 gcacaacgcc gcgtgctgcg cgcggtcagc ccggccgcac gggcagccgg gctgcgcccg
     4801 ggcatgctgc tgtcggccgc gcaggtgctg gtgcaggaca tgcacctgca cgactacgac
     4861 ccgaacgccg aacagcacac ccggcagctg ctggccagct gggcctatgc ctacagttcg
     4921 caggtcagcc tcgatttccc gcatgcgctg gtgctggaga tcggcgccag ccgtgccctg
     4981 ttcggtgact ggctgaccat cgagaaacgc ctgcgcggtg aactgcacga actgggtttc
     5041 cgccatcgcc tggtggccgc gcccacgccg catgccgcgc gcgtgctggc caacgtgcac
     5101 gatggcctcg gcctcgatgc gcagcagctg ccggcggtac tcgcacagct gccgttgccg
     5161 cgctgcgggc tgcccagcga agcagtgacc gtgctgggcc gctccggcct gcgcacgctg
     5221 ggtgcggtgc tcgcgctgcc gcgcgacagc ctggcccggc gcttcgcccc cgacgtgctg
     5281 cagcagctgg atgcgctacg tggccagccc accgcaccac tgcgctacta ccagcctccc
     5341 gaccgtttcg atgcgcgcat cgaattcgaa tatgagatcg aatccagcca ggccctgctg
     5401 ttcccgctgc gtcgcctgct gctggacctg gccgccttcc tgtgctcccg cgatggtggc
     5461 gtgcagcgct tcgacctgca tttcgagcac gacctgctgc cacccagcgt gctgaccatc
     5521 ggcctgctgg cgccggagcg tgatcccgcg ctgctgttcg agatcgcgcg caaccgcatg
     5581 gaagccttcg ccctgcccgc cggcagccgc gcactacgcc tgcacgccga gcagctgccg
     5641 cccttcgtgc ccgccgcgcg cgacctgttc gatacccggc cggcgcaggc gatgccctgg
     5701 acccagttgc gcgagcgcct gcgtgcgcgg ttgggcgatg acgccgtgca gccgctggcg
     5761 gtgcaggccg accatcgccc cgaacgcgcc agtggcaccc agccggcggt caaaccaccg
     5821 tcgtactggc cactacgccc gggctggctg ctggatacgc cgcaaccgct gcgtgatcca
     5881 cgcctgcgca tcgtcgccgg gccggagcgc atcgaatcgg gctggtggga ccaggccgac
     5941 gcacggcgcg actactacgt ggtggaaacc gcgcatggcc agcgcggctg ggccttccgc
     6001 acacgcaacg atccgcatgc accgtggatg ctgcacggct ggttcggctg agccgccatg
     6061 cacagtgaac tgcccggcta cgccgaactg cactgcctgt cggcgttcag tttccagcgc
     6121 ggcgcctcga ttgccgaaga actgttcgcg cgcgccgccg gccagggcta tcgggcgctg
     6181 gcgatcaccg acgagtgctc gctggccggc atcgtgcgcg cctggcaggc ggcgaagacg
     6241 catggcgtgg cactgatcgt cggcgccgaa ttccaggtcg aggacggacc gaagctggcc
     6301 ctgctgtgca ccgaccaggc cgcctatgcc gggctgtgcc agttgatcac cacctgccgg
     6361 cgacgcgcgg ccaagggcga ataccgttgc ctgcgcgacg acctgctcgg cctgcccgac
     6421 ggcctgctct gcctgtggct ggaccggcag ccggccgcca ccgatctgga gctgctgcgc
     6481 accggcttca atgatcgcct gtggctggcg gtggagctgc atcacgagca tgacgacgcg
     6541 catcgcctgc agcagctgca ggccttcggc gaacgccacc gcctgccact ggttgccagt
     6601 ggtgatgtgc acatgcacgt gcgccgccgg cgtgcgctgc aggacacgct gaccgcgatc
     6661 cgccaccgct gcagcgtggc cgaagccggc tggcgcctgt ttcccaacgg cgagcgccat
     6721 ctgcgcccgc gcaccgcgct ggcccagttg tacccgcccg aactgctggc cgagaccctg
     6781 cgcatcgccg aacgctgcca cttcaccctg gagcagctgc agtacaccta cccgcgcgaa
     6841 ctggtgccgg aagggcacga cccggacagc tggctgcgcg tgctggtcga gcgtggcatt
     6901 ccgtggcgct ggaagaacgg catcgaaccg gcgcagcgca agcagatcga acacgaactg
     6961 gcgctgatcc ggcagaagaa ctacgcctcc tacttcctca ccgtgcagga catcgtgcgc
     7021 ttcgcgcgca gccaggacat cctctgccag ggccgtggct cggcggccaa ctcggcggtg
     7081 tgcttcgtgc tgggcgtgac cgagatcgac ccggcacgca gcaatctgtt gttcgagcgt
     7141 ttcatctccg ccgaacgcga cgaaccaccg gatatcgaca tcgacttcga gcacgagcgc
     7201 cgcgaagaag tgctgcagta cgtgttcaag cgctatgggc gtgaacgtgc tgccttgact
     7261 gcagtggcga tcagctaccg cggccgcagc gcgatccgcg atgtggcccg cgcgctcggc
     7321 ctgccgatgg accaggtcaa cgaactgggg gcagcgatgg atcactgggg cggccacgtg
     7381 ccgttgccgg agaccctgcg cgaacgcggc ttcgatccga agaccccgct gatgcgccgg
     7441 ctgctgtcac tgaccgccga gctgatcgac ttcccacgcc acctgtcgca gcacccgggc
     7501 ggcttcgtga tttccgagca tccgctgtcg accctggtgc cggtcgagaa cgcagcgatg
     7561 gccgaccgca ccgtcatcca atgggacaag gatgacctgg atgccaccgg cctgatgaag
     7621 gtcgactgcc tggcactggg catgctcacc gccatccgca aatgcctggc gatgctgcag
     7681 cagcatggcc tgcacagtgg gcgcatggat gcgattcccg atgaggacac acccacctac
     7741 gacatgatca gcgccgccga caccatcggc gtgttccaga tcgagtcgcg tgcacagatg
     7801 gcgatgctgc cacgcatgca gccgcgcaac ttctacgacc tggtgatcga agtggcgatc
     7861 gtgcgccccg gcccgatcca gggcgacatg gtgcacccct acctggagcg ccgccggctg
     7921 ctgcgcgaac agggtccaga ggcgctggac aacctggaag aaccgctgta cccgccgcag
     7981 ctggagcgcg tgttcgcgcg caccctgggc gtgccgctgt tccaggaaca ggtgatgcag
     8041 ctggcggtgg atgcggccag ttacaccccg ggcgaggccg atgccctgcg ccgctcgatg
     8101 gccgcgtgga agcgccgtgg cgggctggag ccgcatcgcg agaagctgct ggcggggatg
     8161 ttgaagaacg gcttcagccg cgaatacggc gaacacctgt tcgagcagat caagggcttc
     8221 ggcgattacg gctttccgga aagccacgcc gccagcttcg ccctgctgac ctatgccagc
     8281 tgctggctga agtgccacca cccggccgcg ttcaccgcca gcctgatcaa cagccagcca
     8341 ctgggcttct acagccccga ccagctgctg caggacgcgc gccggcatgg catcggcgtg
     8401 ctgccgctgg acgtgcgtca cagcgactgg gactgcacgc tggatttcag caagggaccg
     8461 gccgcgatcc ggctcggcct gcgcctggtc gatggctgca acgaacccgc cgtgcaggcc
     8521 atcatgcgag aacgtgcgcg gcgccccttc gacgacgtgg gcgacctgtg ccagcgcacc
     8581 gcgctggacc gtcgccaaca gggcctgctg gccgatgctg gcgcgttgcg tgggctcagc
     8641 ggccatcgcc atcgtgcgcg ctgggacatc tccggcgtgg aaaaccgcct gccgctgttc
     8701 gaccacgccc gcgccaccgc cgaggcccgc gtgccgttgc cgctgcccag cgcctgggaa
     8761 gacatgcagg ccgactaccg cagtaccggc accacccttg gccgccaccc gatctcgttc
     8821 ctgcgcgctc agctgcgcag ccgtggctgc ctggatgctg cacaactggc cggtcacggc
     8881 catggtcgcc gcgtgcgcat cgccggcctg gtgcgcatgc gccagcgtcc gcagaccgcc
     8941 agtggcgtga ccttcctcac ccttgaggac gagaccggca tggtcaacgc ggtggtctgg
     9001 cgccacctgg ccgatcgcca gcatcgggtg ctggttgata cccagctgat gcagatcgat
     9061 ggccgcctgg aacgcgtcga tggcgtgcag catgtcatcg tgcagcgcat gcactgcctg
     9121 gatgagctgc tgcagggact gcgcagccac agccgcgatt tccactgata ccggaaatga
     9181 ctgcgtaacg gccactgggt gatgtcgacc agatagaggt agagtcgact gttagtcgac
     9241 tgcccttcga tcaggctcca gaaattcgcg cgctgcgcgc gatagtcgac taacagtcga
     9301 ctctacccgg tcgactctac ccatcccctt ttgcatccgc tatcgtcggc acatccaagg
     9361 aaggacgaca cgatgccccg tgcactgctg ctgaccacgc tggtggtcgc caccctcgcc
     9421 ctgctggtgt ccggctggac cgcctggagc ctgcaccgca gccaatcgcc acagcgcatc
     9481 atcgaagcac gcgggctggt catccacgat gaaagcggac aaccacgggt gatcctcggc
     9541 gcacccgttc ccgatcctct cagccagggc cgctcccagg ggccgcgtgc gaccgccctg
     9601 tcaggcctga tcctgctcgg cccggacggc tccgaacgcg gtggctatgg caccagcgac
     9661 cgcggcggcg aggccctgct gacccttgac gatgccaccg gaaccactga agtgttcaag
     9721 gtggtggcca acccggaccg cggcgcaagc ctgatggtca agcaccagaa caataccggc
     9781 gccatgctca cctcctggca gggaaagcct gaactgatgt tcgtcgatga cagcggccag
     9841 tcctactacg tgcgcccggg cgccaacgcc gcgccctgat ctgcttttgt agcgtcgagc
     9901 ttgctcgact tt
//
LOCUS       DAOKIP010000149         9878 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.149,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000149 DAOKIP010000000
VERSION     DAOKIP010000149.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 9878)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9878)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9878
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.149"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(34..1443)
                     /locus_tag="QEL58_002945"
     CDS             complement(34..1443)
                     /locus_tag="QEL58_002945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014648889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="coniferyl aldehyde dehydrogenase"
                     /protein_id="HDS1677393.1"
                     /translation="MTTLTPADLPAIMHTLRSAWQAQRPTLDQRENDLRRLREALKLR
                     LDEMTQAIAEDFGHRAHVESKLADGMSVLSAIDHLRRHLRRWSKPQRVGAGWRLWPAR
                     AQLRPTPLGVVGVISPWNYPVTLALVPLATAIAAGNHVLLKPSEHTPRTSAFLADLLA
                     SVFPPDRVAVVQGGADVAAAVSSLPLDHLLFTGSTAVGRKVMAAAAEHLVPVTLELGG
                     KSPAIVCRDFPLDKAAARLATGKWFNAGQTCIAPDYVLIDTARQREFVQALQQQVRER
                     YGDFSDADDYTRIINEGQYRRLQGYLAQARERGVPVIPLAQVDEARADRERLLVPTVV
                     LDPPDDLELMREEIFGPILPVRAYPDLDAALTDVLSRDRPLALYPFSHDKAKVERILG
                     QVVAGGVTVNDTLLHFAADGLPFGGVGASGMGAYHGRAGFDAMSKRLPVLWQSRWAAS
                     DRLRPPYSKIAGLLKFLVR"
     gene            complement(1568..2110)
                     /locus_tag="QEL58_002946"
     CDS             complement(1568..2110)
                     /locus_tag="QEL58_002946"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005420396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3304 domain-containing protein"
                     /protein_id="HDS1677394.1"
                     /translation="MFVLKRVVLAFLVGPPLLSSADAVDASAIYGVNHTNWAINRFSV
                     DGRSAVDIIGPYQGGGGACCYGAPERWYPGLTVRVDWETGAGSSIDFPGTGDWPKFLA
                     WEKKILAQKRSHSKVVPVPDYTGQEVCGITVHFLPCDEIQATTSCYACGSPEYPIKIP
                     LELPEPQSCPAERTDRQKAQ"
     gene            complement(2165..3091)
                     /locus_tag="QEL58_002947"
     CDS             complement(2165..3091)
                     /locus_tag="QEL58_002947"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677395.1"
                     /translation="MFGLLLVAVSVVAASSPATPAKRAAADKVTGVREGMEYTQVRRL
                     LLDAGWVPLDAEYLRPWPAYPDYPEVNCGTGWQATCSAFFFRGDYYFGVGLNPKESRR
                     HLPVEWTWRSRDPAGLARDHRVVKAVISATRQGNVQIEERSPVIKAACGTNKVWLSWN
                     NAVPNATLVTCDYGGTAHDNWGWLVETGLEDDETQVRRFSLGKVSSVAEFKRFGAQVR
                     DAFSSHPWCSGAKPKVPLNAVFATLVKTPSQSGDVPYCFMPHFFTGNTGTPLRSIPAV
                     DDVSPDVPWAEAGLLAREVEILRDWRREFAPE"
     gene            complement(3721..5385)
                     /locus_tag="QEL58_002948"
     CDS             complement(3721..5385)
                     /locus_tag="QEL58_002948"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006403045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MHS family MFS transporter"
                     /protein_id="HDS1677396.1"
                     /translation="MSSTASSPHNPAGTLTQGHKKVIFASSLGTVFEWYDFFLYGSLA
                     AIIAKQFFSGVNETTGMIFALLAFAAGFFVRPFGAAFFGSLGDRIGRKYTFLVTILIM
                     GISTFLVGVLPNYATIGFAAPVILIVLRLAQGLAMGGEYGGAATYVAEHAPDDKRGLY
                     TSFIQCTATLGLFMSLLIILACRYFLGNEAFEAWGWRIPFLVSILLLGISVWIRLQLS
                     ESPLFQQMKAEGKGSKTPFRDSLKGGNLKLMLLVLLGAAAGQAVVWYGGQFYALFFLS
                     SMLKVDATTSYLLIAAALALGVPFFIFFGWLSDRIGRKKIILAGCLLAAVTYIPIFKG
                     LTHFANPAIEEARTNSPALVIADPNTCSFQFDPVAVRKFTSSCDIATAALTKAGVPYD
                     VQPAAAGSLAMVSVGSSQVTSYEGAGLSKEDGKAKADAFGAELKTALTTAGYPAKADG
                     ARINIAGTIFMLWLLVLYVTMVYGPIAAYLVELFPTRIRYTSMSLPYHIGNGWFGGFL
                     PAISFALVAGTGNLYYGLWYPIGIALMSVVVGGLFLRETKNVDITK"
     gene            complement(5496..6923)
                     /locus_tag="QEL58_002949"
     CDS             complement(5496..6923)
                     /locus_tag="QEL58_002949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019337935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677397.1"
                     /translation="MSHRTLKAVRTPLAACLLVALVAPGMAFAETAKEKALEARVAEL
                     ERQVQLLLSSQQQQQTQISQTQQAVTEVRTVQAGQKPVAQVPAGKQPIQVTTITPGAA
                     PGTTVKIGGFIKADFLATQTSDGQLADDATGRSLYLPGQTPVEGAGGTGKRSGTDLNA
                     HAKFSRFNLGIDNVSESGNKAGAFFEMDFFGNSLGNQTATNTYGVTLRHAYMYWNNWL
                     AGQTWSNFMDAAALPEAVDFVGPTDGVIFVRQAQVRYTQGGFSVALENPETTTLTGTR
                     NPVTGAWTNASANSDRGSLPDLTLRYGWKGDWGTFGVGGIVRQLKVDNQATGAKADKV
                     AGGLTLGGKWVMGDSDSLHYQLTGGEGIARYIGLGITADSAYDVARDELNPTGVLAGY
                     VGWRHAFSPKLRTNLIYARSDYDNDSVLGPLVTKSVQSVRGNIFYSPLPKVDIGAELM
                     YGRREIENGNKGDITRLQFTTKYSF"
     gene            7169..9112
                     /gene="acs"
                     /locus_tag="QEL58_002950"
     CDS             7169..9112
                     /gene="acs"
                     /locus_tag="QEL58_002950"
                     /EC_number="6.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003466986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate--CoA ligase"
                     /protein_id="HDS1677398.1"
                     /translation="MADIYPVDPQFAAKARIDKTSYEQQYQASVTDPDGFWGKAAERL
                     QWMRKPTKIKNVSYDLSDFHIKWFEDGELNASVNCLDRQLDTRGNKTALLFEPDGPDA
                     PAQHVTYRELYERTCRLGNALRNLGVKKGDRVTIYLPMIVDAAVAMLACARIGAIHSV
                     VFGGFAPNSIADRVSDCQSKLIITADEGLRGGRKIPLKANVDAALKLPGTNTVETVLV
                     VRHTGGAVDMQAPRDRWFHDVVDSQPATCEPERMNAEDPLFILYTSGSTGKPKGVLHT
                     TGGYLLYAAYTHEAVFDLREDDIYWCTADVGWVTGHSYIVYGPLANGATSLMFEGVPN
                     YPDTSRFWNVIDKHKVSIFYTAPTAIRALMREGEEPVKKTSRASLRLLGSVGEPINPE
                     AWRWYYEVVGDSRCPIVDTWWQTETGGILISPLAGAMDLKPGSATLPFFGVQPALVNA
                     DGEIQDGPTEGNLIIRDSWPGQMRTVYGDHQRFIDTYFRTYPGSYFTGDGCRRDEDGY
                     YWITGRVDDVINVSGHRIGTAEVESALVSHPKVAEAAVVGFPHDVKGQGIYAYVTLVA
                     EEAPSDELQKELVAWVRKEIGPIATPDHLQWAPGLPKTRSGKIMRRILRKIAENAPDQ
                     LGDTSTLADPSVVASLVDERKVR"
     gene            9234..>9878
                     /locus_tag="QEL58_002951"
     CDS             9234..>9878
                     /locus_tag="QEL58_002951"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017156036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDS1677399.1"
                     /translation="MTTLLIADDHPLFREALRGAVQRVIPGVQLFEADSVEALYALAD
                     QHNDADLVLMDLNMPGAQGFNALVHMRSLHPHLPVVVVSAREEATVMRRALDHGALGF
                     IPKSADSDTIGHALGTILDGETWAPPEAHNVPPTGSEEREVGQRLRELTPQQFRVLQM
                     LGAGRLNKQIAYDLNVSEATIKAHVTAILRKLGVTNRTQAVLMAGKLAIDDDAIV"
BASE COUNT         1783 a         3238 c         3194 g         1663 t
ORIGIN      
        1 cgctggccgg caaccccatg acccccgccg gcactaccgc acgaggaact tcaacaaccc
       61 ggcaatcttc gagtacggcg gccgcaaccg atcgctggcc gcccagcgcg actgccacag
      121 caccggcagc cgcttgctca tcgcatcgaa cccggcccgg ccgtggtacg cgcccatgcc
      181 gcttgcccct accccgccga acggcaggcc atcggccgcg aaatgcagca gcgtgtcgtt
      241 gaccgtcacc ccaccggcca ccacctggcc gaggatgcgc tccaccttcg ctttgtcatg
      301 gctgaaggga tacagcgcca gcggccgatc gcgggacagc acgtcggtca acgcggcatc
      361 cagatccggg taggcccgta ccggcaggat cgggccaaag atctcctcgc gcatcagctc
      421 caggtcgtcc ggcgggtcca gcaccacggt cggcaccagc aggcgctcgc ggtcggcgcg
      481 cgcctcatcc acctgcgcca gcggaatgac cggcacgccg cgttcgcgcg cctgcgccag
      541 ataaccctgc aggcgccggt actgtccttc gttgatgatg cgtgtgtaat cgtcggcatc
      601 gctgaagtcg ccgtagcgct cgcgtacctg ctgctgcagc gcctgcacga actcgcgctg
      661 gcgtgcggtg tcgatcagca cgtagtccgg cgcgatgcag gtctggccgg cgttgaacca
      721 cttgccggtg gccagccgcg cagcagcctt atccagaggg aaatcgcggc agacgatggc
      781 cggggatttg ccgcccagct ccagcgtgac cggtaccaga tgctcggcgg cagcagccat
      841 caccttgcgg cccaccgccg tcgagccggt gaacagcaga tggtccagcg gcagcgagga
      901 caccgccgcg gccacgtccg ccccaccctg caccaccgcc acccgatcgg gcgggaacac
      961 gctggccagc agatcggcca ggaatgcact ggtgcgcggg gtgtgttccg aaggcttcag
     1021 cagcacgtgg ttgccggcgg cgatggcggt ggccagcggc accagtgcca gcgtgaccgg
     1081 gtagttccag ggcgagatca ccccgaccac gcccagcggc gtcggccgca gctgcgcgcg
     1141 cgccggccac agtcgccaac cggcaccgac ccgctgcggc ttcgaccagc gccgcaggtg
     1201 gcggcgcaga tggtcgatgg ccgacagcac gctcatgccg tcggccagtt tcgattcaac
     1261 atgggcgcgg tggccgaagt cctcggcgat ggcctgcgtc atctcgtcca ggcgcagctt
     1321 cagcgcctcg cgcaggcggc gcaggtcatt ctcgcgctgg tcgagcgtgg ggcgctgcgc
     1381 ctgccatgcg ctgcgcaggg tgtgcatgat ggcggggaga tcggccggag taagggtggt
     1441 catgggccga ttgtagggtc gagccgtgct tggctcgcat gccaaccttc acgcggtggc
     1501 gcatggcctc attcgggaac ctcggcacca acgtgcatgc gtgcaccctt cccaatgaac
     1561 gcgcccatca ctgggccttc tgccggtcgg tacgttccgc cgggcatgac tgcggttctg
     1621 gcaactcaag cggaatcttg atcgggtact cggggctgcc gcaggcgtaa caggaggtag
     1681 tggcctgaat ctcatcacag ggcaggaaat gcacggtgat gccgcagact tcctggccgg
     1741 tgtaatccgg gacggggacg actttgctgt gactgcgttt ttgcgccagg atcttcttct
     1801 cccaagccaa aaacttgggc cagtctccgg ttccaggaaa atctatcgag cttcctgcac
     1861 ccgtttccca gtcaacccgc accgtcagcc ccgggtacca gcgctccggt gcaccgtagc
     1921 agcaggctcc acccccgcct tgatatgggc caatgatgtc aacggctgaa cggccatcga
     1981 cactgaatcg gttgatcgcc cagttggtgt gattgacgcc atagatcgca ctggcatcca
     2041 cagcgtcagc agatgagagc agaggtgggc caacaagaaa tgccagcacc acgcgcttca
     2101 gaacaaacat cactgaaacc ccagaatgtg tagcccaaat atcgtgtccg agggcgtcga
     2161 ttcgctactc aggcgcaaac tcccgcctcc agtcacgcag gatctcgacc tccctcgcga
     2221 gcaggccggc ctctgcccac ggaacgtccg gcgatacatc gtccaccgcc ggaatgctcc
     2281 gcaaaggagt gccagtgttc cctgtgaaga agtgaggcat gaaacagtac ggcacatctc
     2341 cactctggct gggcgtcttc accaacgttg caaagaccgc attcagcggc accttcggct
     2401 tggcgcctga gcaccaggga tgcgagctga aagcatcccg cacctgtgcg ccaaaccgct
     2461 tgaactccgc gacgctggac accttgccca gagagaaacg gcgcacctgc gtctcatcgt
     2521 cttccaatcc ggtctcgacc agccaacccc aattgtcatg cgccgtaccg ccgtagtcgc
     2581 aggtcaccaa tgttgcgttt ggtactgcgt tgttccagga cagccagacc ttgttcgttc
     2641 cgcacgccgc tttgatcaca ggtgaccttt cctcgatctg cacgttgccc tggcgcgtcg
     2701 cgctgatgac cgctttcaca acacggtggt cgcgtgccaa ccctgccgga tcacgcgacc
     2761 tccacgtcca ctccacgggc agatggcgtc gggactcctt ggggttcagc cccaccccga
     2821 agtaatagtc accgcgaaag aagaatgcgg agcaggttgc ttgccacccg gtgccacaat
     2881 tgacctccgg atagtccgga taagccggcc aaggccgcag gtactctgcg tccagcggga
     2941 cccaccctgc gtcaagcagc agcctgcgta cctgtgtgta ctccatgcct tctcgcacac
     3001 cagtaacctt gtcggctgct gcacgcttcg cgggcgtcgc cggtgatgac gccgccacga
     3061 cggacactgc aactagaaga aggccgaaca tgatctgctc tggttggatg gcttcttcat
     3121 gctagttggc gcgtggacgc attgcccgga ttcgagccat acgcgccaca gattgtcgaa
     3181 ttcgaccagg aacgccctcc cactcctcgc caatcacgtc atctcgttcc agagcgatgg
     3241 gaagatgtgc aaattcgtac atatttcatg gccgagcggc tccaggtcca ccaatgtatg
     3301 cgtctgacgc gctgaagagc agggtgtagt gcgaggatga agcggtggac gggctgttgt
     3361 acttgctctt tccgttcgaa gcctggaacg agaggctgaa catccctcgc aatgaggtgc
     3421 acttcccgtt tgttcctgtg tgcaacctcg ttgtcgtccg cgctgcgcgt tgcccgggag
     3481 ccgaccagtt gcgcaggcag atccgccagg caggcgatga gagcgcgcag cgtcggttct
     3541 gcatcgaagc gttttcaatg cggcagtttg agcccagcca tggatgcccg gagtagcgcg
     3601 tcctgcggtt gggtcagagc cctttcgcat gcgaaaggga tccgaccccg atcgccggca
     3661 cataaacaga aaggccgcgg tctgcaccac ggcctctcct tcatccgatg accatcattc
     3721 ctacttggtg atgtccacgt tcttggtctc acgcaggaac aggccaccca ccaccaccga
     3781 catcagcgcg atgccgatcg ggtaccacag gccgtagtac aggttgccgg taccggccac
     3841 cagcgcgaac gagatcgccg gcaggaagcc accgaaccag ccgttgccga tgtggtacgg
     3901 cagcgacatc gaggtgtaac ggatgcgggt cgggaacagt tcgaccaggt aggcggcgat
     3961 cgggccgtag accatggtca cgtacagcac cagcagccac agcatgaaga tcgtgccggc
     4021 gatgttgatg cgtgcaccat cggccttggc cgggtaccca gcagtggtca gggcggtctt
     4081 cagctccgca ccaaacgcat cggcctttgc cttgccgtct tccttgctca ggccagcgcc
     4141 ttcatacgag gtgacctggc tgctgcccac gctcaccatc gccagcgagc cggcagcggc
     4201 aggctgcacg tcgtacggca cgccggcctt ggtcagcgcg gcggtggcga tgtcacagga
     4261 gctggtgaac ttgcgtacgg cgaccgggtc gaactggaag gaacaggtat tcggatcggc
     4321 aatgaccagt gccggcgagt tggtccgggc ttcttcgatg gccgggttgg cgaagtgggt
     4381 caggcccttg aagatcggga tgtaggtgac ggcagccagc aggcagccgg ccaggatgat
     4441 cttcttgcgg ccgatacgat cggacagcca gccgaagaag atgaagaacg gcacgcccag
     4501 cgccagcgcg gcagcgatca gcaggtagga ggtggtggca tcgaccttca gcatgctgct
     4561 gaggaagaac agcgcgtaga actggccgcc gtaccagacc acggcctggc ccgccgcagc
     4621 gccgagcagg accagcagca tcagcttcag gttgccgccc ttcaggctgt cacggaacgg
     4681 cgtcttggac cccttgccct ctgccttcat ctgctggaac agcggcgact cgctcagctg
     4741 caggcggatc cacaccgaga tgcccagcag caggatcgag accaggaacg ggatgcgcca
     4801 gccccaggcc tcaaaggctt cattgccgag gaaatagcgg caggccagga tgatcagcag
     4861 cgacatgaac aggccgagcg tggcggtgca ctggatgaag ctggtgtaca ggccacgctt
     4921 gtcgtccggc gcgtgctcgg ccacgtaggt ggcagcaccg ccgtactcac cgcccatcgc
     4981 caggccctgg gccaggcgca gcacgatcag gatgaccggg gcagcaaagc cgatcgtggc
     5041 gtagttgggc agcacgccga ccaggaaggt cgagatgccc atgatcagga tggtgaccag
     5101 gaaggtgtac ttgcggccga tgcggtcgcc gaggctgccg aagaaggccg cgccgaacgg
     5161 acgcacgaag aagccggcag cgaacgccag cagggcgaag atcatgcccg tggtttcatt
     5221 gacgccactg aagaactgct tggcgatgat ggcggcgagc gagccgtaca ggaagaagtc
     5281 gtaccactcg aacaccgtgc cgaggctcga tgcgaagatg accttcttgt ggccctgggt
     5341 cagggtaccc gctggattgt gcgggcttga tgcagtgctg gacatgggac gttttccctc
     5401 tgtagatgcc ggccttggtc ggcactcaat tcggtgggtg ccggccatga ccggcacccc
     5461 atctcggtag gtgccggccg ctggccggca cgctcttaga agctgtactt ggtggtgaac
     5521 tgcaatcggg tgatgtcacc cttgttgccg ttctcgatct cgcgacggcc gtacatcagc
     5581 tcggcgccga tatcgacctt gggcagcggt gagtagaaga tgttgccgcg cacgctctgc
     5641 acgctcttgg tcaccagcgg gcccagcacg ctgtcgttgt cgtagtcgct gcgcgcgtag
     5701 atcaggttgg tgcgcagctt cggcgagaac gcatgccgcc agcccacata accggcaagc
     5761 acgccggtcg ggttgagctc gtcgcgggcc acgtcgtagg cgctgtcggc ggtgatcccc
     5821 aggccgatgt agcgggcgat gccttcgccg ccggtcagct gatagtgcag cgaatcgctg
     5881 tcacccatca cccacttgcc gcccagggtc aggccgccgg ccaccttgtc ggccttggcg
     5941 ccggtggcct ggttgtcgac cttcagctgg cggacgatgc caccgacacc gaaggtgccc
     6001 cagtcgccct tccagccata gcgcagggtc aggtcgggca ggctgccacg atcggagttg
     6061 gcactggcat tggtccaggc gccggtgacc gggttgcggg taccggtgag ggtggtggtt
     6121 tccgggttct ccagcgcgac gctgaagccg ccctgggtgt agcgcacctg ggcctggcgc
     6181 acgaagatca cgccgtcggt ggggccgacg aagtcgaccg cttccggcag tgcggccgca
     6241 tccatgaagt tggaccaggt ctggccggcc agccagttgt tccagtacat gtaggcgtgg
     6301 cgcaaggtca cgccataggt gttggtggcg gtctggttgc ccagcgaatt gccgaagaag
     6361 tccatctcga agaacgcgcc ggccttgttg ccggactcgc tcacgttgtc gatgcccagg
     6421 ttgaaacgcg agaacttggc gtgggcgttg aggtcggtgc ccgaacgctt gccggtgccg
     6481 ccggcaccct ccaccggggt ctgacccggc aggtacagcg agcggccggt ggcatcgtcg
     6541 gccagctggc catcgctggt ctgggtggcc aggaagtcgg ccttgatgaa gccgccgatc
     6601 ttgaccgtgg tgcccggcgc ggcgcccgga gtgatggtgg tgacctggat cggctgcttc
     6661 ccggccggca cctgtgcgac cggcttctgc ccggcctgca ccgtgcggac ttcggtcacc
     6721 gcctgctggg tctggctgat ctgggtctgc tgttgttgct gcgaagacag cagcagctgg
     6781 acctggcgtt ccagttcggc aacgcgtgct tccagcgctt tctctttggc ggtctctgcg
     6841 aacgccatgc ccggtgcgac cagggcgacc aacaggcagg ccgccaaagg tgtgcgcacg
     6901 gctttcaacg tacggtggct catgttgccc tctctcccag gtggcaaggt gatgccgcgc
     6961 gtggggcacg gtcgagccga gactgcgggg cgttcgcgca cagcggctat tcgccattgg
     7021 tcgaacccgg ccctgctggg cgctcacttt cgaccatggt ctaaccaggg tggtgacgcg
     7081 gccgggggtg gatggggcaa actgagggga atcggtcgcc gcgatgctgc gaccgcacat
     7141 acaaagtcaa cgtgcaagtg agggtgccat ggctgatatc taccccgtcg atccgcagtt
     7201 cgccgccaag gcacgcatcg acaagacgtc gtacgaacag cagtaccagg cttcggtgac
     7261 cgacccggat ggtttctggg gcaaggccgc cgagcgcctg caatggatgc gcaagccgac
     7321 gaagatcaag aacgtcagct acgacctgtc cgatttccac atcaagtggt tcgaggatgg
     7381 cgagctcaat gccagcgtga actgcctgga ccgccagctg gacacgcgcg gcaacaagac
     7441 cgcgctgctg ttcgaaccgg atggtcccga cgcgccggcc cagcacgtga cctatcgcga
     7501 gctgtacgag cgcacctgcc gcctcggcaa cgcgctgcgc aacctgggcg tcaagaaggg
     7561 cgaccgggtc accatctacc tgccgatgat cgtcgacgct gcagtggcca tgctggcctg
     7621 cgcgcgcatc ggcgcgatcc actcggtggt gttcggtggc ttcgcgccga actcgatcgc
     7681 cgaccgcgtc agcgactgcc agagcaagct gatcatcacc gccgacgaag gcctgcgcgg
     7741 cggccggaag attccgctga aggccaacgt cgatgccgcg ctgaagctgc ccggcaccaa
     7801 taccgtggaa accgtgctgg tggtgcgcca caccggcggc gcggtggaca tgcaggcgcc
     7861 gcgcgaccgc tggttccacg acgtggtgga tagccagccg gccacctgcg agcccgagcg
     7921 catgaacgcg gaagacccgc tgttcatcct ctacacctcc ggttccaccg gcaagccgaa
     7981 gggcgtgctg cacaccaccg gcggctacct gctgtacgcg gcctacaccc atgaagcggt
     8041 gttcgacctg cgcgaggacg acatctactg gtgcaccgcc gacgtcggct gggtcaccgg
     8101 gcacagctac atcgtgtacg ggccgctggc caacggcgcg acctcgctga tgttcgaagg
     8161 cgtgccgaac tatccggata cctcgcgctt ctggaacgtg atcgacaagc acaaggtgag
     8221 catcttctac accgctccga ccgccatccg tgcgctgatg cgcgagggcg aggagccggt
     8281 gaagaagacg tcgcgcgcct cgctgcgcct gctcggcagc gtcggcgaac cgatcaatcc
     8341 ggaagcctgg cgctggtact acgaagtggt cggcgacagc cgctgcccga tcgtcgatac
     8401 ctggtggcag accgaaaccg gaggcatcct gatctcgccg ctggccggtg cgatggacct
     8461 caagccgggc tcggccaccc tgcccttctt cggcgtgcag ccggcgctgg tcaatgccga
     8521 tggcgagatc caggacggcc cgaccgaggg caacctgatc atccgtgatt cctggccggg
     8581 ccagatgcgc acggtgtacg gcgaccatca gcgtttcatc gacacctact tccgtaccta
     8641 cccgggcagc tacttcaccg gcgacggttg ccgccgcgac gaggacggct attactggat
     8701 caccggccgc gtcgacgatg tgatcaacgt gtccggccac cgcatcggca ccgccgaagt
     8761 ggaaagcgcg ctggtctcgc acccgaaggt ggccgaagcg gccgtggtcg gtttcccgca
     8821 cgacgtgaag ggccagggca tctacgccta cgtgaccctg gtggccgaag aagcaccgag
     8881 cgacgaactg cagaaggaac tggtcgcctg ggtgcgcaag gagatcggac cgatcgccac
     8941 gccggaccac ctgcagtggg cgccgggcct gccgaagacc cgctcgggca agatcatgcg
     9001 ccgcatcctg cgcaagatcg ccgagaacgc gccggaccag ctcggtgaca cctcgaccct
     9061 ggccgatccg tcggtggtgg cgtcgctggt ggacgagcgc aaggtgcgct gatggcgtga
     9121 ctgcaggcgc aggacgcgcc agggacgtgg ccgggaggag ggacccggcc ccgtccgacc
     9181 cgtcctgcac ctgccatcac gtcgctcttt ttcctgatcg ataagctcga cccatgacca
     9241 ccctcctgat tgccgatgac cacccgctgt tccgcgaagc cctgcgtggg gcggtgcagc
     9301 gggtcatccc gggcgtgcag ctgttcgaag ccgacagcgt ggaagcgctg tacgcgctgg
     9361 ccgaccagca caacgacgcc gacctggtcc tgatggatct caacatgccc ggtgcgcagg
     9421 gtttcaacgc gctggtgcac atgcgctcgc tgcacccgca cctgccggtg gtggtggtgt
     9481 ccgcgcgcga agaggccacg gtgatgcgcc gcgcactcga ccacggcgcg ctcggcttca
     9541 ttccaaagtc ggccgactcg gacaccatcg gccatgcact gggcaccatt ctcgatggcg
     9601 agacctgggc accgccggaa gcgcacaacg tgccgcccac cggcagcgag gaacgcgagg
     9661 tggggcagcg cctgcgcgag ctgaccccgc agcagttccg cgtgctgcag atgctcggcg
     9721 ccggccgctt gaacaagcag atcgcgtacg acctcaacgt ctccgaagca acgatcaagg
     9781 cgcacgtcac tgcgatcctg cgcaagctgg gcgtgaccaa ccgcacccag gcggtgctga
     9841 tggccggcaa gctggcgatc gacgacgacg ccatcgtg
//
LOCUS       DAOKIP010000150         9835 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.150,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000150 DAOKIP010000000
VERSION     DAOKIP010000150.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 9835)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9835)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9835
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.150"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(137..213)
                     /locus_tag="QEL58_002952"
     tRNA            complement(137..213)
                     /locus_tag="QEL58_002952"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(177..179),aa:Arg,seq:acg)
     gene            complement(246..322)
                     /locus_tag="QEL58_002953"
     tRNA            complement(246..322)
                     /locus_tag="QEL58_002953"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(286..288),aa:Arg,seq:acg)
     gene            complement(392..468)
                     /locus_tag="QEL58_002954"
     tRNA            complement(392..468)
                     /locus_tag="QEL58_002954"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(432..434),aa:Arg,seq:acg)
     gene            complement(459..1385)
                     /locus_tag="QEL58_002955"
     CDS             complement(459..1385)
                     /locus_tag="QEL58_002955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HDS1677400.1"
                     /translation="MSLTPDTLAVQCEDGHRYEVIACVPAQPIARLLWLPALGVAARH
                     YLPLAQALAARGVAVYLHEWRGNGSSSLRPSRTQDWGYREVLEQDLPASQAVLAAADD
                     ETGPLPWIIGGHSLGGQLACVHAGRAPQHFNRLWLAASGSPFWRGFPPPRGWLLPLVY
                     RFLPWIAQRQGVLHGRRLGFGGTEARGLIADWARVGLNNHYAAVGMSEDLDAQMARVH
                     GSAQAVLMEHDWLAPAGSMQTLLAKLPNVDAQLRVLSAQELGTRADHFAWLKAPDAVA
                     DCFFIQLSENFHKTVDGARRHPHNSAPVAGRP"
     gene            complement(1382..2191)
                     /gene="thiD"
                     /locus_tag="QEL58_002956"
     CDS             complement(1382..2191)
                     /gene="thiD"
                     /locus_tag="QEL58_002956"
                     /EC_number="2.7.1.49"
                     /EC_number="2.7.4.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional hydroxymethylpyrimidine
                     kinase/phosphomethylpyrimidine kinase"
                     /protein_id="HDS1677401.1"
                     /translation="MSPTTPVSALTIAGSDSGGGAGIQADLKAFAAHRVHGLSAIAAL
                     TAQNTRGVTAVHVPPVDFLRAQLEACFDDFDIHAVKLGMLANAEVINVVADTLQRHRP
                     PHVVLDPVMVATSGARLLEDSALQAMRERLIPLATLITPNTPEAELLVGRNIGNGNDA
                     EQAASALLDLGAGAVLLKGGHLHEGNRVIDRYFDGVSSEEFIHARLPLDAHGTGCTLA
                     SAIAAQLCNGLSLANACEAGIDYVARGLQRGYAPGRSEVLVLDHFGAAPHA"
     gene            complement(2256..2924)
                     /locus_tag="QEL58_002957"
     CDS             complement(2256..2924)
                     /locus_tag="QEL58_002957"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1275 domain-containing protein"
                     /protein_id="HDS1677402.1"
                     /translation="MGIRLPTWVWIGAVALSCVAGMVNVVGFLGFEHQAVSHMTGSTS
                     QLGMALAQGDWRAVGHLWGLLIAFSLGAMLSGLLIQDSALQLGRRYGVALALESALLL
                     MAIPLFEQHQIWGALAAAMACGLQNAMATTFSGAVVRTTHLSGMFTDLGIGLGHLLRG
                     LPLQVRRLTLSGLIISGFLAGGILGAWLFMRWQYDALLAPALLTGLTGLGYVLYQQWA
                     RWRH"
     gene            complement(2937..3443)
                     /locus_tag="QEL58_002958"
     CDS             complement(2937..3443)
                     /locus_tag="QEL58_002958"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010484285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677403.1"
                     /translation="MSRCTRLLLPTAAIALAAALGACTTTRGPASVPTAERTGQSWVV
                     TRPIIAAQVLDTCSRPSPGREAGRVSGYWAPSRQQVDQLEAKLSSLEAQVPKVLDFDR
                     QYVGIESAGKRLIYINAFHLPDDSGVNPAREAIRVCDGGAQFWGAVFDPASNTFSELQ
                     FNGGFGGP"
     gene            complement(3440..4840)
                     /locus_tag="QEL58_002959"
     CDS             complement(3440..4840)
                     /locus_tag="QEL58_002959"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010365742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhoH family protein"
                     /protein_id="HDS1677404.1"
                     /translation="MTRGKRIYVLDTNVLMHDPTALFKFEEHDVYLPMQVIEELDNGK
                     KGTSEASRNARQVSRFLNELVQASGLDNLADGIPLQRPNGLQLRGKQSAGKLRFQTSH
                     FDAGKSFGQVIPDNAILGAILALKEETPDLPVVFVSKDINLRIKAAIAGIVSEDYEND
                     RALDDFSLLYTGATELPEDFWKRHGEDLRSWSDKGRTHYEIQAQDGEEWYPNQYVYLP
                     GEDEVELRVSRVVGDGKVVLSLVDDFRHGSHAVWGISARNREQNFALNALMDPEIDFV
                     TLLGTAGTGKTLLALAAGLAQTMDQQRYREIIMTRATVSVGEDIGFLPGTEEEKMTPW
                     MGALTDNLEVLTHNQEGGTWGRQATNDLLASRIKIRSMNFMRGRTFLSRYLILDEAQN
                     LTPKQMKTLITRAGPGTKIVCLGNVEQIDTPYLTETTSGLTYAVDRFKNWPHSAHITL
                     RRGERSRLADYASEVL"
     gene            complement(4925..5404)
                     /locus_tag="QEL58_002960"
     CDS             complement(4925..5404)
                     /locus_tag="QEL58_002960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014036783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HDS1677405.1"
                     /translation="MNNGDTLDSTTLSLPLALSGGDQATLGDYAGHWLVLYFYPKDST
                     PGCTTEGIDFNALLPKFRKAGAVVLGVSRDSVKSHDNFCAKQGFNFPLVSDGDEALCS
                     AFDVIKMKNMYGKQVRGIERSTFLISPDSRIVQSWRKVKVAGHADAVLAELKASQSK"
     gene            complement(5496..6056)
                     /locus_tag="QEL58_002961"
     CDS             complement(5496..6056)
                     /locus_tag="QEL58_002961"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017909527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system protein R"
                     /protein_id="HDS1677406.1"
                     /translation="MTDTTPRPAPSENHLLINAYTTHPESPLLSVTRRIADSGCNLVD
                     ARLATVGRDVSVTALATGSWDSVAKLEAMLTRLEREEGLKLVWYRTAAKQAQSNLLPY
                     IVEVIAADKPGILFQLADFFDRQGITIENLQSTRYRAMQTGAEMFSAQVTIGVPANMH
                     IAALRDDFLEFCDHLNLDAIMDPMKF"
     gene            6221..7114
                     /locus_tag="QEL58_002962"
     CDS             6221..7114
                     /locus_tag="QEL58_002962"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate synthase"
                     /protein_id="HDS1677407.1"
                     /translation="MSLSGLITALATPFRADGALDPDGWQRLLHLQLEGGVHGVVVAG
                     STGEAATLTDAEYDLLLASAVERIGGRIPVMAGTGLSGTAKTIEQTRRAAALGASHAL
                     VVTPPYVRPTQAGLIAHYRAVADQGGLPVVLYNVPGRTGCDMQPETVAELARHPNIVG
                     IKEAVGDTGRVQALLALRSPQFAVLSGDDGTAARSIQAGIDGLVSVGSNVLPGAYRRM
                     CELAAAHDHEATGSWDARLQPFHDFCGVEPNPIPVKALLRRIGIGHDLRLPLLPLSAA
                     HHPAADHLAGDIAALEALSSH"
     gene            7147..7662
                     /locus_tag="QEL58_002963"
     CDS             7147..7662
                     /locus_tag="QEL58_002963"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014646745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677408.1"
                     /translation="MRQSVSTVRVLSYALLAVAVAAGTTGCFKRGVKGDYALAPEMRP
                     LEVPPDLNLPNATSDNKVPTLASATKPAAPVAAAPAAANTGFTIAGGKDEAFAKVGTA
                     LEGVAGVTIASRAQLLGSYDVAYEGSNFLVRVVAVDAGAYISAVDPRGLPATAEAPVK
                     LIAALKAKLAQ"
     gene            complement(7838..8161)
                     /locus_tag="QEL58_002964"
     CDS             complement(7838..8161)
                     /locus_tag="QEL58_002964"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005994928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin family protein"
                     /protein_id="HDS1677409.1"
                     /translation="MPFVVTENCIKCKHTDCVEVCPVDCFHEGPNFLVIDPDECIDCT
                     LCEPECPVNAIFPEDDVPAGQEGFVALNAELAKEWPVLTVRKDPPADAGEWDGKPDKL
                     KLLER"
     gene            8353..9777
                     /locus_tag="QEL58_002965"
     CDS             8353..9777
                     /locus_tag="QEL58_002965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar porter family MFS transporter"
                     /protein_id="HDS1677410.1"
                     /translation="MSQAQTGTAPHGGENTAFIVLISCVATLGGFLFGFDSGVINGTV
                     DGLRQAFNSSEAALGFEVASMLLGCAIGAFLAGWLGDRLGRRGVLIVSALMFLVSALG
                     AGAAHASWLFIAARVLGGFAVGAASVMSPAYIAEVASARYRGRLATVQQMAIICGLFA
                     AFLSNYLLARAAGASTEPLWLGHEAWRWMFWMQALPSGLFLLLLLVIPESPRFLVLKG
                     RQAQARAVLARLYGDGAAAAKQAEIEASLAHDQHKPRFGDLRDKATGRLRPILWVGIG
                     LAMFQQLVGINVVFYYGAVLWQAVGFSESDALLINVLSGALSIGACLLTVLLIDRIGR
                     KPLLWVGSVGMSVALVLMVVAFASGSLAEGRLQLTDGMGRLALVAANVYVVFFNMSWG
                     PVMWVMLGEMFPNQIRGPALAVAGAAQWTSNFAITVTFPMLLAGIGLAGAYGIYTVAA
                     ILSIFFVVRHVRETKGKELEQMEG"
BASE COUNT         1538 a         3195 c         3358 g         1744 t
ORIGIN      
        1 gaatgccagc ttttgctgtt gctgttgccg ttgccttggc ttgccttggc ttgaagcatc
       61 tgcaggtgca gggcgcagcc ctgccgaaaa acacacataa aaaaacagca ggccgaggcc
      121 tgctgtttcg gtgtaatggt gcgcccggag agattcgaac tcccgaccgc ctggttcgta
      181 gccaggtact ctatccaact gagctacggg cgccaattac ataaacttgt tgtgctgact
      241 gtgtatggtg cgcccggaga gattcgaact cccgaccgcc tggttcgtag ccaggtactc
      301 tatccaactg agctacgggc gcgcggtaca caatcaactt actgccaaat tttactgcat
      361 ttccagcggc ggatgctgga aacctgtcga gtggtgcgcc cggagagatt cgaactcccg
      421 accgcctggt tcgtagccag gtactctatc caactgagct acgggcgccc tgcgacagga
      481 gcggaattat gcggatgtcg gcgcgcaccg tcaacagttt tgtgaaaatt ttcactcaac
      541 tgaatgaaaa agcagtcagc caccgcgtcc ggagctttca gccaggcgaa atgatcggca
      601 cgcgtgccca gttcctgcgc ggacagcacg cgcagctgcg cgtccacatt cggcagcttc
      661 gccagcagcg tctgcatcga gccggccggc gccagccagt cgtgttccat cagcaccgcc
      721 tgcgcactgc cgtgcacccg cgccatctgc gcatcgaggt cttcgctcat gccgacggcg
      781 gcgtagtggt tgttcaggcc gacgcgcgcc cagtcggcga tcagtccgcg tgcctcggtg
      841 ccaccgaagc cgaggcgacg gccatgcagc acgccctggc gctgcgcgat ccatggcagg
      901 aagcggtaga ccaacggcag cagccagccg cgcggtgggg ggaagccgcg ccagaacggc
      961 gagccactgg ccgccagcca tagccggttg aagtgttgcg gagcgcggcc ggcatgcacg
     1021 caggccagtt gtccgcccag gctgtggccg ccgatgatcc agggcagcgg gccagtttca
     1081 tcatccgcgg cggccagcac ggcctggctg gccggcagat cctgttcgag tacctcgcga
     1141 tagccccagt cctgcgtacg tgacgggcgc agcgagctgc tgccgttgcc gcgccactca
     1201 tgcaggtaga ccgccacccc cctggcggcc agtgcctgtg ccagcggcag gtagtggcgc
     1261 gcggccacgc ccagtgccgg cagccacagc aggcgcgcga tgggctgcgc aggcacgcag
     1321 gcaatcacct cgtagcgatg gccatcctcg cactgcacgg caagcgtgtc cggcgtcagg
     1381 ctcatgcgtg cggtgccgcg ccgaagtgat cgagcaccag cacctcgctg cggccggggg
     1441 cgtagcccct ctgcagcccg cgcgcgacat agtcgatgcc ggcctcgcag gcattggcca
     1501 ggctcaggcc gttgcacagc tgcgcggcaa tggcagaggc cagcgtgcag ccagtgccgt
     1561 gcgcatccag cggcaggcgg gcgtggatga attcttcgct gctgacgccg tcgaagtagc
     1621 ggtcgatcac gcggttgccc tcatgcagat ggccaccctt gagcagaacg gcgccggcac
     1681 cgaggtcgag cagggcggag gcggcctgct cggcatcgtt accgttgccg atgttccgcc
     1741 cgaccagcag ttctgcttcc ggtgtgttcg gggtgatcag cgtggcaagg ggaatcaggc
     1801 gctcacgcat cgcctgcagg gcgctgtctt ccagcaggcg tgcgccactg gtggcgacca
     1861 tcaccgggtc cagcaccacg tgcggtgggc gatggcgctg cagtgtgtcg gcaacgacgt
     1921 tgatcacctc ggcgttggcc agcatgccga gcttcaccgc gtggatatcg aaatcatcga
     1981 aacaggcctc cagctgcgca cgcaggaagt cgaccggcgg cacgtgcacg gcggtcacgc
     2041 cgcgggtgtt ctgtgcggtc agcgcggcga tcgccgacag gccatgcacg cgatgtgcgg
     2101 cgaaagcctt caggtcggcc tggattccag caccaccgcc ggagtcggag ccggcgatgg
     2161 tgagggcgga tacgggagtg gtcgggctca tccagcgatt gtgccgtggt cccgctgggg
     2221 aaggtagctc cgcgccatgc gtggatgtcc ttgactcaat gccgccagcg cgcccactgc
     2281 tggtacagca catagcccag cccggtcagg ccggtcagca gggcgggggc gagcagggcg
     2341 tcgtactgcc agcgcatgaa caaccaggcg ccgaggatgc caccggcgag gaagccgctg
     2401 atgatcaacc cgctgagggt cagtcggcga acctgcagcg gcagcccacg cagcaggtgg
     2461 cccaggccga tgccgaggtc ggtgaacatg ccgctgaggt gggtggtgcg caccactgcg
     2521 ccgctgaagg tggtggccat cgcattctgc aggccgcagg ccatggcggc ggccagtgcg
     2581 ccccagatct ggtgctgttc gaacagcgga atggccatca gcagcagcgc cgattccagc
     2641 gccagcgcaa cgccgtaacg acgccccagc tgcagggcgc tgtcctggat caacaggccg
     2701 ctgagcatgg cgcccagcga gaaggcgatc agcaggcccc acagatgccc gaccgcacgc
     2761 cagtcgccct gggccagcgc catgcccagc tggctggtgc tgccggtcat gtggctgacc
     2821 gcctgatgct cgaaacccag aaaaccgacc acgttgacca tgccggccac gcacgagagc
     2881 gcaaccgcac cgatccagac ccaggtgggc aggcgtattc ccatcggcag ggcccctcag
     2941 ggcccgccga agccgccgtt gaactgcagc tcgctgaagg tgttgctggc cgggtcgaac
     3001 acggcgcccc agaactgtgc accgccatcg cagacgcgga tcgcttcacg ggccggattg
     3061 acgccgctgt cgtcgggcag gtggaaggcg ttgatgtaga tcagccgctt gccggcactt
     3121 tcgatgccga cgtactggcg atcgaagtcc agcaccttcg gcacctgcgc ttccagcgag
     3181 gacagcttcg cttccagctg gtcgacctgt tgccggctgg gcgcccagta gccgctgacc
     3241 cgcccggcct cgcggccggg gctggggcgt gagcaggtgt ctagcacctg cgcggcgatg
     3301 atcgggcggg tgaccaccca ggactgtccg gtacgctcgg cggtcggcac gctggccggg
     3361 ccgcgcgtgg tggtgcaggc gcccagcgcg gctgcgaggg cgatcgcagc cgtgggcagc
     3421 agcagtcggg tgcagcggct cacaatacct ccgaagcgta gtcggccagg cgcgaacgct
     3481 cgccacggcg cagggtgatg tgcgcgctgt gcggccagtt cttgaagcga tccaccgcgt
     3541 aggtcaggcc cgaggtggtc tcggtcaggt acggggtgtc gatctgctcg acgttgccca
     3601 ggcagacgat cttggtgccg gggccggcac gggtgatcaa ggtcttcatc tgcttcgggg
     3661 tgaggttctg cgcctcgtcc aggatcaggt agcgcgacag gaaggtgcgg ccgcgcatga
     3721 agttcatcga gcggatcttg atgcggctgg cgagcaggtc gttggtcgcc tggcggcccc
     3781 aggtgccgcc ttcctggttg tgcgtcagca cttccaggtt gtcggtcagc gcgcccatcc
     3841 acggcgtcat cttctcttcc tcggtgccgg gcagaaagcc gatgtcctcg ccgacgctga
     3901 ccgtggcgcg ggtcatgatg atctcgcggt agcgctgctg gtccatcgtc tgcgccaggc
     3961 cggcagccag tgccagcagg gtcttgccgg tgccggcggt gccgagcagg gtgacgaagt
     4021 cgatctccgg atccatcagc gcgttgagcg cgaagttctg ctcgcggttg cgtgcactga
     4081 tgccccacac ggcatggctg ccatggcgga aatcgtcgac cagcgacagc accaccttgc
     4141 cgtcgccgac cacgcggctg acgcgcagct cgacttcatc ttcgccgggc aggtagacgt
     4201 actggttcgg ataccactcc tcgccatcct gggcctggat ttcgtagtgg gtgcggccct
     4261 tgtcgctcca gctgcgcagg tcttcgccgt ggcgcttcca gaagtcttcc ggcagctcgg
     4321 tggcgccggt gtagagcagg ctgaaatcgt ccagcgcgcg atcgttctcg tagtcctcgg
     4381 acacgatgcc ggcgatcgcc gccttgatcc gcaggttgat gtccttggaa acgaacacca
     4441 ccggcaggtc cggggtttct tccttcaggg ccaggatcgc gccgaggatg gcgttgtccg
     4501 ggatcacctg gccgaagctc ttcccggcgt cgaaatggct ggtctggaag cgcagcttgc
     4561 cggcgctctg cttgccgcgc agctgcagcc cattggggcg ctgcagcgga atgccgtcgg
     4621 ccaggttgtc caggccggac gcctgcacca gctcgttgag gaagcggctc acctggcggg
     4681 cattgcggct cgcttcggat gtgcccttct tgccgttgtc cagctcctcg atcacctgca
     4741 tgggcaggta aacgtcgtgc tcctcgaatt tgaacagcgc ggtgggatcg tgcatcagca
     4801 cattggtatc cagcacgtag atgcgcttgc ctcgggtcat cgtcgattcc tggttacgga
     4861 cagggaaaaa ccatcacggc ctgccgcagg gcagggtgat ggcagacaca gtaggcagtg
     4921 ggactcactt ggactgggag gccttcagtt cggcgagaac ggcatcggca tggccggcaa
     4981 ccttgacctt gcgccaggac tgcacgatgc ggctgtcggg ggaaatcagg aaggtgctgc
     5041 gttcgatgcc acgtacctgc ttgccgtaca tgttcttcat cttgatcacg tcgaaggcgc
     5101 tgcacagcgc ttcgtcgcca tcactgacca gcgggaagtt gaagccctgc ttggcgcaga
     5161 agttgtcgtg cgacttcacc gaatcgcggg agacaccgag cacgaccgca ccggccttgc
     5221 ggaacttcgg cagcagcgcg ttgaagtcga tgccttcggt ggtgcagccg ggggtgctgt
     5281 ccttgggata gaagtacagc accagccagt ggccggcgta atcgccgagg gtggcctggt
     5341 cgccaccgga cagggccagc ggcagggaga gggtggtgct gtccagggtg tcgccgttgt
     5401 tcatgaggtc cttctgtcga gcctgggttc tttctacgac aattgcatga aacgccacgc
     5461 gcccgtgagg gacgcgcgaa aaatcaggaa ttcattcaga acttcatcgg gtccatgatc
     5521 gcgtccaggt tcaggtggtc gcagaattca aggaaatcgt cgcgcagcgc ggcgatgtgc
     5581 atgttggccg gcacgccgat ggtgacctgc gcactgaaca tttccgcacc ggtctgcatg
     5641 gcgcggtagc gcgtgctctg caggttctcg atggtgatgc cctggcggtc gaagaaatcg
     5701 gccagctgga acaggatgcc cggcttgtcg gcggcgatca cttcgacgat gtacggcagc
     5761 aggttggact gcgcctgctt ggcagcggtg cggtaccaga ccagcttcag gccttcctcg
     5821 cgctccagcc gggtcagcat cgcttccagc ttggccaccg agtcccagga gccggtggcc
     5881 agggcggtga ccgagacatc gcggccgacc gtggccaggc gcgcgtccac caggttgcag
     5941 ccgctgtcgg cgatgcggcg ggtgacggac agcaggggag actccggatg cgtcgtatag
     6001 gcgttgatca ggaggtggtt ttcgctcggc gcggggcgcg gggtggtgtc ggtcaaggcg
     6061 attccgggta atgcatgcgt tagtctgaat gcccgccaga ggcggggatc caccggtgtc
     6121 cagcatactt gcccgtgctt tcgcgccgca agtaacattc aggtcgcccc cggcctttcg
     6181 tggcgggcgt tttcccttcc cagccaagag cagcacgtcc ttgtcccttt ccggcctcat
     6241 caccgcgctg gcgaccccgt tccgggccga cggcgccctc gatcccgacg gttggcagcg
     6301 cctgctgcac ctgcaactgg aaggtggcgt ccatggcgtt gtcgtagccg gctcgaccgg
     6361 cgaagcggcg accctcaccg atgccgagta cgacctgctg ctggccagcg cggtcgagcg
     6421 catcggcggc cgcatcccgg tcatggccgg taccggcctg tcgggtacgg ccaaaaccat
     6481 cgaacagacc cgccgcgccg ccgcgctggg tgccagccat gcgctggtgg ttaccccgcc
     6541 gtacgtgcgg ccgacccagg ccggcctgat cgcgcactac cgcgcggttg ccgaccaggg
     6601 cgggttgccg gtggtgctgt acaacgtgcc cggccgcacc ggttgcgaca tgcagccgga
     6661 gaccgtggcc gaactggccc gccatcccaa catcgtcggc atcaaggaag cggtgggcga
     6721 caccggccgg gtgcaggcgc tgctggcgct gcgcagcccg cagttcgcgg tgctcagtgg
     6781 cgatgacggc actgccgcgc gctcgatcca ggccggtatc gacggcctgg tctcggtcgg
     6841 ttccaacgtg ctgcccggcg cctaccgccg catgtgcgag ctggccgccg cccatgacca
     6901 cgaagccacc gggtcgtggg atgcgcgcct gcagccattc cacgacttct gcggtgtcga
     6961 gccgaacccg attccggtca aggcgctgct gcgccgcatc ggcatcggcc acgacctgcg
     7021 cctgccgctg ctgccgctgt cggcggcgca tcatccggct gccgaccatc ttgccggcga
     7081 catcgccgcc ctcgaagccc tttccagcca ctgaccttcc gtcttggtct gacccaggag
     7141 attcacatgc gtcaatccgt ttccaccgtc cgcgtgctgt cctacgccct gcttgctgta
     7201 gctgtcgcgg ccggcaccac cggttgcttc aagcgtggcg tcaagggcga ctacgccctg
     7261 gccccggaaa tgcgtccgct ggaagtgccg ccggacctga acctgcccaa cgccacctcc
     7321 gacaacaagg tgccgacgct tgcttcggcg accaagccgg cggcgccggt ggctgcggcc
     7381 ccggcggcgg cgaacaccgg tttcaccatc gccggcggca aggatgaagc cttcgccaag
     7441 gtcggtaccg cgctggaagg cgtggcgggc gtgaccatcg ccagccgcgc gcagctgctg
     7501 ggctcgtacg acgtggccta cgaaggcagc aacttcctgg tccgcgtggt cgctgtcgat
     7561 gccggcgcct acatctccgc ggtcgacccg cgtggcctgc cggccactgc cgaagcgccg
     7621 gtcaagctga ttgccgcact gaaggcgaag ctggcccagt aagagccggt cgggtgggtg
     7681 cgggcccagg tccgcacgtg cccgagtagg ggccgacctt ggtcggcgct tctgtgccaa
     7741 ccaaggttgg cacctaccgg atcacgcggt tggcatctgc cgaagaacag aaaagggcgc
     7801 cctcggcgcc cttttccgtt gccgcagtga gcgcttctca gcgctccagc agcttcagct
     7861 tgtccggctt gccgtcccat tcgccggcgt cggcgggcgg gtccttgcgc acggtcagca
     7921 ccggccattc ctttgccagt tcggcattga gggcgacgaa gccttcctgc ccggcgggga
     7981 cgtcgtcctc cgggaagatc gcgttgaccg ggcactccgg ctcgcagagg gtgcagtcga
     8041 tgcactcatc cgggtcgatc accaggaagt tcgggccttc gtggaagcaa tccacggggc
     8101 acacttccac gcaatcggtg tgtttgcact tgatgcagtt ttcggtgacg acaaagggca
     8161 tgggctgggg gtggatcgat tcctgaacct gacaattcta gaacaggttg gcccccggtg
     8221 tcggcgcggg gcggaaaacg ggcgtctggc aggcgcgacc actgcggcca ttggcggcac
     8281 ggccaggcct gtgcgacgct gcgggccatc ggccgcaggg gtggtcgaat tccctttcca
     8341 gcaggatcgt ccatgtccca agcccagacc ggcaccgccc cgcacggcgg tgagaacacc
     8401 gcgttcatcg tcctgatcag ttgcgtggcc accctcggtg gattcctgtt cggttttgac
     8461 agtggtgtca tcaatggcac ggtcgatggc ctgcgccagg ccttcaactc cagcgaagcg
     8521 gcactgggtt tcgaagttgc ttcgatgctg ctgggctgcg cgatcggcgc cttcctggcc
     8581 ggctggctgg gggatcgcct ggggcgccgc ggcgtactga tcgtctcggc gctgatgttc
     8641 ctggtctcgg cgctgggcgc cggcgccgcc catgcgtcct ggctgttcat cgccgcgcgc
     8701 gtgctcggcg gcttcgccgt aggcgcggcc agcgtgatgt caccggccta catcgccgaa
     8761 gtggcctcgg cgcgctatcg cggccgcctg gccacggtgc agcagatggc gatcatctgc
     8821 gggctgttcg ccgccttcct cagcaactac ctgctggccc gcgcagccgg cgcgtcaacc
     8881 gagcccctgt ggctgggcca cgaggcctgg cgctggatgt tctggatgca ggcgctgccg
     8941 tccgggctgt tcctgctgct gttgctggtg attccggaga gcccgcgctt cctggtgctg
     9001 aaggggcggc aggcgcaggc gagggcggtg ctggcccggc tgtacggcga cggcgcggcg
     9061 gcggccaagc aggccgagat cgaagccagc ctggcgcacg accagcacaa gccgcgcttt
     9121 ggtgatctgc gcgacaaggc caccggccgg ctgcgcccga tcctctgggt cggcatcggc
     9181 ctggccatgt tccagcagct ggtcggcatc aacgtggtgt tctactacgg cgcggtgctg
     9241 tggcaggcgg tcggcttctc ggaaagcgat gcgctgctga tcaacgtgct gtcgggtgca
     9301 ctgagcatcg gggcctgcct gctgaccgtg ctgctgatcg accgcatcgg ccgcaagccg
     9361 ctgctgtggg tcggttcagt cggtatgtcg gtggcgctgg tgctgatggt ggtggccttt
     9421 gccagtggca gcctggccga gggccgcctg cagctgaccg acggtatggg ccggctcgcg
     9481 ttggtcgcgg ccaacgtcta cgtggtgttc ttcaacatgt cctggggccc ggtgatgtgg
     9541 gtgatgctgg gcgagatgtt cccgaaccag atccgcggcc cggcactggc agtggccggc
     9601 gcggcacagt ggacctcgaa cttcgcgatc accgtgacct tcccgatgct gctggccggc
     9661 atcggcctgg ccggggccta cggcatctat acggtcgcag cgatcctctc gatcttcttc
     9721 gtcgtccgcc atgtgcgcga gaccaagggc aaggagctgg agcagatgga aggctgacgg
     9781 ccagcctgtg tttcagcgcc tcctttctcc gtggggaggc tgcaggccag ccgat
//
LOCUS       DAOKIP010000151         9803 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.151,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000151 DAOKIP010000000
VERSION     DAOKIP010000151.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 9803)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9803)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9803
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.151"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            5..571
                     /gene="yeiP"
                     /locus_tag="QEL58_002966"
     CDS             5..571
                     /gene="yeiP"
                     /locus_tag="QEL58_002966"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009603592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P-like protein YeiP"
                     /protein_id="HDS1677411.1"
                     /translation="MKANDIKKGNVVEYNNGVYQIRDIERSSPQGRGGNVRFRFIMYS
                     VPGGNKLDASFDADDNLVEVELLRRQSTYSYKDGDAFVFLDDEDYTPYTLDADVIGDD
                     AGYITDGLTGIYVQVIDEQPVAIQLPASVVLEVIETPPELKGGTATKRPKPAKLNTGI
                     EIMVPEYIVNGERVLVNTATGEFAGRAD"
     gene            complement(654..1355)
                     /locus_tag="QEL58_002967"
     CDS             complement(654..1355)
                     /locus_tag="QEL58_002967"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MliC family protein"
                     /protein_id="HDS1677412.1"
                     /translation="MRVVPSLLAASLALVLAACQPAQPPAAGGNDAAPPAAPEPAAST
                     GTGAGSETLYQCGDLNVRATFNGEDAATVVIGDRTFAMTSERAASGAKYGDGQGNSFW
                     TKGSDDGLLSLKGEPDRECHAVEAIEGDGSAGNAAFRATGNEPGWLAVVDGDKPGLQV
                     EVDYGERRFDVARPTEGADGWSGKAADGTDVKLSFQRTTCQDDMSGESFDAKVNLTIG
                     TRQYHGCGNFGAQQP"
     gene            complement(1439..1831)
                     /locus_tag="QEL58_002968"
     CDS             complement(1439..1831)
                     /locus_tag="QEL58_002968"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HDS1677413.1"
                     /translation="MERNIVEDLHELQLIALEQRLCQALLAGDHDALGTLVSPALFMM
                     DGQGGRMLDLPWLGEWLAGHLQVRSLQVHTVETLLCGRLALLSSDVRLAVWRQGRECE
                     LKLRLLRVWTCSSGDSGAQLLSMAVLAA"
     gene            complement(1812..4961)
                     /locus_tag="QEL58_002969"
     CDS             complement(1812..4961)
                     /locus_tag="QEL58_002969"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005416363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit"
                     /protein_id="HDS1677414.1"
                     /translation="MARFFIDRPVFAWVLAIFIILAGVLAIPRLAVERYPAVAPPSVS
                     IYASYPGASPQTLNDAVVGLIERELSSVKHLLYFESSVDTSGEASITATFKPGTNPEL
                     AQVDVQNRIKAIEPRLPRSVRQNGLFVEAADSGFLMLVGLRSPDASVSEAALGDFMAR
                     NIIEELRRIDGVGRVQLFGAEQAMRVWLDPTRLTGYGLTMGDVAAAIEQQNLEISPGR
                     IGDSPGVPGQRITVPLSADGQLSTPEQFAAIVLRAGADGSRVVLGDVARVELGAQSYA
                     WGTREDGHPATAAGVQLRPGANAVRTAAAVRERMAELAPLLPRGVESSIPFDTAPFVK
                     ISIQKVVQTLLEAMLLVFAVMYLFLQNWRYTLIPALVAPIALLGTFAVMMALGFSINV
                     LTMFGMVLAIGIIVDDAIVVVEGVERIMAEEGLPPREATIKAMRELTGAVIGITLVLT
                     AVFIPMALASGSVGAIYRQFTVAMAVSILFSALLALSLTPALCATLLRPNSHGHHGRG
                     GLFGAFNRGFERMTGRYQRGVASVLQRSGRVMGVFAALVAALLLGLHWLPGAFLPEED
                     QGYFMTSIQLPAEATAERTLAVVEAYERHVASRPGIGSNQSILGYSFSGSGPSAALTY
                     TMLKDWGERAGATAAGEVAAAQKAMAAVAEGEVMSVMPPAIDSLGRSSGFSLALQART
                     GQSQAELRAALQQLLKLAEASRLLSEVHADGLPAGTSVRLDIDRAKAEAMGVGFEHIS
                     NTLSAAMGSQYVNDFPNKGRLQQVILQADAPHRMELEDVLKLYVRNSEGGMVALSELV
                     TPHWTEAPLQLQRYLGFPALNLSGAPASGVSTGQAMAEMERLARQLPSGFALQWTSQS
                     LQERESGAQAPWLLLLSMLVVFLVLAALYESWSIPLAVMLVVPLGLLGAVAAVLLRGM
                     PNDVFFKVGMITVIGLSAKNAILIVEFARQLQQQGRGLAEAALEAARLRLRPIVMTSL
                     AFALGVVPLMLAQGASKETQQAIGTGVFGGMVSATVLAVFFVPVFYVVVQGARQWIAQ
                     RLRRRRPMPEGSVDGTEHR"
     gene            complement(4998..6146)
                     /locus_tag="QEL58_002970"
     CDS             complement(4998..6146)
                     /locus_tag="QEL58_002970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006363828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HDS1677415.1"
                     /translation="MRTFRTPAALIAAIALAMTACSSPEATPEAAPRVSVVTVGPQVV
                     QRDDELPGRVAAVRTAQIRAQVGGIVQRRLFEQGAEVSAGQALFQIDPAAFRADVDSA
                     LAALQRSEAALGRSRVQSQRLHALAAAQAVSQQHRDDASAEYEQARAAVNEARAILAR
                     RQLDLRYATVSAPIAGRIDQALVSEGALVGVADAEPMAVVQQIDQVYVDVRQPAAQLE
                     SLQRSAAGDGELPVTIIGAAGKPLSERGQLLFSGINVDARTGDVILRILVDNPQRQLL
                     PGMYVRARVPRGAPASALTVPQQAVLRSAGGQAYAWVIAGDGKAVIRTLEVDGSVDRQ
                     WLVRHGLKAGERVVVEGQERLQEGEVVDVRDWQRPVASAGAMQAGSKG"
     gene            6276..6992
                     /locus_tag="QEL58_002971"
     CDS             6276..6992
                     /locus_tag="QEL58_002971"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005416361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDS1677416.1"
                     /translation="MHASPALAALVLIVEDEAEIADILTAYLEREGLRTLRAADGHGA
                     LDLHRSARPDLVLLDVQLPRLDGWSVLTQLRQRGETPVIMLTALDQDLDKLTALRMGA
                     DDYVVKPFNPAEVAARVRAVLRRTLRASRVDAPSALRVGPLLIDSATHAVHVEGDGYS
                     HEVLLTLTEFKLLHCMALAPTRIFSRSELMHECLPESEALERTVDSHVSKLRRKLDEV
                     GMLNVPASVRGVGYRLMADR"
     gene            6992..8068
                     /locus_tag="QEL58_002972"
     CDS             6992..8068
                     /locus_tag="QEL58_002972"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing protein"
                     /protein_id="HDS1677417.1"
                     /translation="MGTLRRSGLSRHIIVSMSLMVIGVIVMMILSSWLLYAVLVEFFP
                     GSAEEPESWLPTGPELAWMVGVILTGLALAIAASFRLAHRILSPLNSLVDSVRALAGG
                     DLGARASVEENSPGEVATLVEDFNAMARRLQHMESERAMWHAAIAHELRTPVTILRGR
                     LQGLAEGVFQPDESQFRSLLAQVEGLSRLIEDLRVLSLSDNARLDVRRARTDVVAEVH
                     SVMTLVDPQFRTAGFVLELETSREEHTAHCDPTRLRQALLALLENARRYASPGKVRIA
                     VHDTPGHVQVAIEDEGPGIDPALHADIFTPFMRADGSRSRQGGGSGLGLAVVKAIADA
                     HGGRVYCMPGSAGGSRFVIELPRQ"
     gene            complement(8046..9800)
                     /locus_tag="QEL58_002973"
     CDS             complement(8046..9800)
                     /locus_tag="QEL58_002973"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014646976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4105 domain-containing protein"
                     /protein_id="HDS1677418.1"
                     /translation="MLIAHVAHAADRLQLDPAGLSPVQQQVAGQTLADVQSLLPDGLL
                     RALPTQVQVRWGADLPAEVHGRAFAGRITLRRDLLDDRVPGARRARRSALVHELTHVA
                     DRGGAGWSRSARWRDLAGWQRKPWHLGRGHNDFRARSPDGYELKDPAEYLAVNAEHFV
                     LDAEFACRRPALAQWYQGHFGTPPSLPKPQCDSRVPLLQAEPEEGAASLLQLDPSRVY
                     AVDYLFAEGSAQPMSRWGHSMLRLVICRPGRAPGPDCRLDLEYHRVLSFRAFVGDVQI
                     SNWRGLTGGYPSRLFVLPLQQVVDEYTKVELRGLQSLPLQLERDEIASLLERTAQVHW
                     SYDGRYYFVSNNCAVETAKLLQAGVPRLGSAGLAQLSPRGLKRRLARLQVLDEQVLAD
                     RDSAQAQGYYFASARDHFQQLFDVAAGQLALPTRDVRGWLKLPGRQRAPWLLQGDLRA
                     SAGLLLLEQAAQRRAELRARDVLKRQLLGAPDSAQTRNLRGLLEQSGQWLRPGTLLQG
                     DGYGLPLADEQALLMHAVATASAQAVPAWRALRLQLRQQLPVNQREEMDAIDANLAAL
                     GAHLRTQAASSPTGAAVR"
BASE COUNT         1622 a         3538 c         3160 g         1483 t
ORIGIN      
        1 caccatgaaa gccaacgaca tcaagaaggg caacgtcgtc gagtacaaca acggcgtgta
       61 ccagatccgc gacatcgagc gcagctcgcc gcagggtcgc ggcggcaacg tccgcttccg
      121 cttcatcatg tacagcgtgc cgggcggcaa caagctcgac gccagcttcg atgccgacga
      181 caacttggtc gaggtcgaac tgctgcgccg ccagtccacc tattcgtaca aggacggcga
      241 cgccttcgtg ttcctcgatg acgaggacta caccccgtac acgctggacg cggacgtgat
      301 cggcgacgac gccggctaca tcaccgacgg cctgaccggc atctacgtgc aggtcattga
      361 cgagcagccg gtggcgatcc agctgccggc ctcggtggtg ctggaagtga tcgagacccc
      421 gccggaactg aagggtggca ccgccaccaa gcgcccgaag ccggccaagc tcaacaccgg
      481 tatcgagatc atggtgccgg agtacatcgt caacggcgaa cgcgtgctgg tgaacaccgc
      541 caccggtgaa ttcgccggac gcgccgacta agcgcctcga gctgcctgcg gcgcacgccg
      601 ccacaggcag catcttccat gcagccgggc actgtcccgg ctgcacggat cacttacggc
      661 tgctgggcac cgaaattacc gcaaccgtgg tactggcgcg tgccaatggt cagattcacc
      721 ttggcgtcga atgattcgcc actcatgtcg tcctggcagg tggtgcgctg gaagctgagc
      781 ttgacgtcgg tgccatcggc cgcctttccg ctccagccat cggcgccttc ggtgggcctg
      841 gccacgtcga agcggcgctc accgtaatcc acttccacct gcaggccggg cttgtcgcca
      901 tccacgaccg ccagccagcc cggttcgttg ccggtagcac ggaacgccgc gttgccggcg
      961 ctgccatcgc cctcgatggc ctccaccgcg tggcattcgc ggtccggctc gcccttcagg
     1021 ctcaacaggc cgtcatcgct gcccttggtc cagaagctgt tgccctggcc atcaccatac
     1081 ttcgcgcccg acgccgcacg ctcggaggtc atcgcaaagg tgcgatcgcc gatcaccacc
     1141 gtggccgcat cctcgccatt gaaggtcgcg cgcacgttca gatcgccgca ttggtacagg
     1201 gtctcgctgc cggcgccggt gccggtgctg gcagccggtt cgggcgcagc cggcggtgcg
     1261 gcatcattgc cgcccgcagc cggcggttgc gccggctggc acgcggccag caccaatgcc
     1321 agggaggctg ccaacagact gggaactaca cgcatggctc gactccttgt cgacactact
     1381 gagaggttcg accctatcac ctggcggtga gcagggcctg aaagcggcct gaccacgctc
     1441 acgcggccag caccgccatc gacagcagtt gggcgccgct gtcgccggaa ctgcaggtcc
     1501 acacccgcag caggcgcagt ttcagttcgc actcgcgacc ctgccgccac accgccaggc
     1561 gtacatcgct ggacagcagc gccagccgcc cgcacagcag cgtctccacc gtgtggacct
     1621 gcaggctgcg cacctgcagg tggcctgcaa gccactcgcc cagccagggc aggtcgagca
     1681 tgcgcccgcc ctggccatcc atcatgaaca gcgctggcga taccagcgtg cccagcgcat
     1741 cgtggtcgcc ggccagcagt gcctggcaca ggcgctgctc cagtgcgatc aactgcagtt
     1801 catgcaggtc ttcaacgatg ttccgttcca tccacggatc cttccggcat cggccggcgc
     1861 ctgcgcaggc gttgcgcgat ccattgccgc gcgccctgca ccactacata gaagaccggc
     1921 acgaagaaca ccgccagcac ggtcgcactg accatgccgc cgaacacgcc ggttccgatc
     1981 gcctgctggg tttccttcga cgcaccctgc gccagcatca gtggcaccac gcccagcgcg
     2041 aacgccagcg aggtcatcac gatcggccgc aggcgcagcc gcgccgcctc cagcgccgct
     2101 tcggccagtc cgcgcccctg ctgctgcagc tgccgcgcga actcgacgat gaggatcgcg
     2161 ttcttcgccg acagcccgat caccgtaatc atgcccacct tgaagaacac gtcgttgggc
     2221 atgccgcgca acagcaccgc cgcgaccgca ccgagcaggc ccagcggcac caccagcatc
     2281 accgccaacg ggatcgacca gctctcgtac agcgccgcca gcaccaggaa caccaccagc
     2341 atcgacaaca gcagcagcca cggtgcctgt gcgcccgatt cgcgctcctg cagcgattgg
     2401 ctggtccact gcagggcgaa gccggagggc agctgcctgg ccagccgctc catctccgcc
     2461 atcgcctggc cggtcgacac gcccgatgcc ggtgcgccgg acagattcag cgccgggaaa
     2521 ccgagatagc gctgcagctg cagcggcgcc tcggtccagt gcggcgtgac cagttcggac
     2581 agcgccacca tgccaccttc gctgttgcgc acgtacagct tcagcacgtc ctccagttcc
     2641 atccggtgcg gtgcgtcggc ctgcaggatc acctgctgca accggccctt gttggggaaa
     2701 tcgttgacgt actgcgagcc catcgctgcc gacagcgtgt tgctgatgtg ctcgaagccc
     2761 acgcccatcg cctcggcctt ggcgcggtcg atgtccagcc gcacgctggt gccggccggc
     2821 aggccatcgg catgcacctc cgacagcagc cggctggcct cggccagttt cagcagctgc
     2881 tgcagggctg cacgcaactc ggcctggctc tgcccggtcc gcgcctgcag ggccagcgag
     2941 aagccggacg aacgccccag gctgtcgatt gccggtggca tcacgctcat cacctcgccc
     3001 tcggcgacgg cggccatcgc cttctgcgca gccgccacct caccggctgc ggtggcaccg
     3061 gcgcgctcgc cccagtcctt cagcatggtg taggtcagcg ccgcgctcgg gcccgaaccg
     3121 gaaaagctgt agccgaggat cgactggttg gagccgatgc ccgggcgcga cgccacgtgc
     3181 cgttcgtagg cttcgaccac cgccagggtg cgctcggccg tggcttcggc gggcagctgg
     3241 atcgaggtca tgaaatagcc ctggtcctct tccggcagga acgcacccgg cagccagtgc
     3301 aggcccagca gcaacgcggc caccagcgcg gcgaacacgc ccatcacccg cccgctccgc
     3361 tgcaacaccg aggccacgcc gcgctggtaa cgcccggtca tcctctcgaa gccgcgattg
     3421 aaggcgccga acagcccgcc acgaccgtga tgaccatggc tgttcgggcg caacaaggtc
     3481 gcgcacagcg ccggggtcag gctcagcgcc agcagcgccg agaacaggat cgacaccgcc
     3541 atcgccacgg tgaactggcg gtagatcgcg cccaccgagc cgctggccaa cgccatcgga
     3601 atgaacaccg cggtcagtac cagggtgatg ccgatcaccg cgccggtcag ctcgcgcatc
     3661 gccttgatgg tggcctcgcg cggtggcagg ccctcctcgg ccatgatccg ctccacgccc
     3721 tcgaccacca cgatcgcatc gtcgacgatg atgccgatcg ccagcaccat gccgaacatg
     3781 gtcagcacgt tgatcgagaa gccgagcgcc atcatcaccg cgaaggtgcc caacagtgcg
     3841 atcggggcga ccagcgccgg aatcagcgta tagcgccaat tctgcaggaa caggtacatc
     3901 accgcgaaca ccagcagcat cgcctccagc agcgtctgca ccaccttctg gatcgagatc
     3961 ttgacgaacg gcgcagtgtc gaacggaatg ctcgactcca cgccacgcgg cagcagcggc
     4021 gccagctcgg ccatgcgctc gcgcactgcg gcggcggttc gcactgcatt cgcgcccggg
     4081 cgcagctgca cgccggccgc cgtcgccggg tggccgtcct cccgcgtgcc ccaggcataa
     4141 ctctgtgcgc ccagttccac gcgtgcgaca tcgcccagca cgacccgcga accgtcggcg
     4201 cccgcgcgca gcacgatggc ggcgaactgt tccggcgtgg acaactggcc atcggcactc
     4261 agcggcacgg tgatgcgctg gccggggacg cccggcgaat cgccgatgcg gcctggcgag
     4321 atctccaggt tctgctgctc gatggccgcg gccacatcgc ccatggtcaa gccatagccg
     4381 gtcaaccggg tcgggtccag ccatacccgc atggcctgct cggcaccgaa cagctgcacg
     4441 cggccgacgc catcgatgcg gcgcagctct tcgatgatgt tgcgcgccat gaagtcaccc
     4501 agcgccgcct cactgacact ggcatccggc gagcgcaggc cgaccagcat caggaagccg
     4561 gaatcggccg cttccacgaa caggccgttc tggcgcacgc tgcgcggcag gcggggttcg
     4621 atcgccttga tccggttctg cacatccacc tgcgccagct ccgggttggt ccccggcttg
     4681 aaggtggcgg tgatcgaggc ttcgccggag gtatccaccg acgattcgaa gtacagcagg
     4741 tgcttgacgc tggacagctc gcgctcgatc aggccgacca ccgcgtcgtt cagcgtctgc
     4801 gggctggccc ccgggtagct ggcatagatg ctgacgctgg gcggcgcaac ggccggatag
     4861 cgctccacgg ccaggcgcgg aatcgccagt acgcccgcca ggatgatgaa gatcgccagc
     4921 acccaggcga acaccgggcg atcaatgaag aaacgtgcca tgttggattt ccctggagag
     4981 actggcccgg gaagggctca gcccttgctg ccggcctgca tcgcaccggc gctggcgacc
     5041 ggccgctgcc agtcgcgcac atcgaccacc tcgccttcct gcaggcgctc ctggccctcg
     5101 accacgaccc gctcgccggc cttcagcccg tgccggacca gccactggcg atcaacgctg
     5161 ccgtcgacct ccagcgtgcg gatcaccgcc ttgccatcgc ccgcgatcac ccaggcatag
     5221 gcctggccac ccgcgctgcg cagcaccgcc tgctgcggca cggtcaatgc actggccggg
     5281 gcgccacgcg gcaccctggc acgcacgtac atgcccggca gcagctggcg ctgcggattg
     5341 tcgaccagga tgcgcaggat cacatcaccg gtgcgcgcat cgacgttgat gccagagaac
     5401 agcagctggc cgcgttcgga cagcggcttg ccggccgcgc cgatgatcgt caccggcagt
     5461 tcgccatcgc cggcggcgct gcgctgcagc gactccaact gcgcggccgg ctggcgcacg
     5521 tcgacgtaga cctggtcgat ctgctgcacc accgccatcg gctcggcatc ggcgaccccg
     5581 accagcgcgc cttcgctcac cagtgcctgg tcgatgcggc cggcaatcgg tgcactgacc
     5641 gtggcgtagc gcaggtcgag ctggcggcgg gccaggatcg cgcgtgcttc gttcactgcc
     5701 gcgcgcgcct gttcgtactc ggcactggca tcatcgcgat gctgctggct gaccgcctgc
     5761 gcggcggcca gcgcatgcag gcgctgcgac tgcacgcggc tgcggcccag cgctgcttca
     5821 ctgcgctgca gcgcagccag cgccgaatcg acgtcggcac ggaatgccgc cggatcaatc
     5881 tggaacagag cctggccagc acttacttcg gcgccctgct cgaacaggcg gcgctgcacg
     5941 atgccgccca cctgcgcgcg gatctgcgcc gtgcgtaccg cggccacgcg accgggcagt
     6001 tcgtcgtcac gctgcaccac ctgcgggccg acggtgacca cgctgacgcg cggtgcggct
     6061 tcgggggtgg cttcggggga ggagcaggcc gtcatggcca gagcgatggc cgcgatcaac
     6121 gcggccggag tcctgaaggt tctcattgct gtgcacaatg ccgcgcgggc ggctgaaagg
     6181 ttctgaagaa cgcagtgtgc gtggcgatga tggggtttcg atggaggaac tgtggagata
     6241 cgatggaggc aagcacctta aggccccgcc cccgcatgca tgcctcccct gccctggccg
     6301 ccctcgtcct gattgtcgag gatgaggccg agatcgccga tattctcacc gcctatctgg
     6361 aacgcgaagg actgcgcacc ctgcgtgccg ccgatggcca cggtgcgctc gacctgcacc
     6421 gcagcgcccg ccccgacctg gttctgctgg acgtgcagct gcctcgcctg gatggctgga
     6481 gcgtgttgac ccagctgcgc caacgtggcg aaacgccggt gatcatgctg accgcgctgg
     6541 accaggacct ggacaagctg accgcactgc gcatgggcgc cgacgactac gtggtcaagc
     6601 cgttcaaccc ggccgaggtg gctgcgcgcg tgcgcgccgt gttgcggcgt acgctgcgcg
     6661 cctcgcgcgt ggatgcaccc agcgcgctgc gcgtgggccc gctgctgatc gactcggcaa
     6721 cccatgccgt gcacgtggag ggcgacggct acagccatga agtcctgctc accctcaccg
     6781 agttcaagct gctgcactgc atggcactgg cccccacgcg catcttcagc cgcagcgaac
     6841 tgatgcacga gtgcctgccg gagagcgagg cgctggagcg caccgtcgac agccatgtca
     6901 gcaagctgcg ccgcaagctg gatgaggtgg gcatgctcaa tgtaccggcc agtgtgcgcg
     6961 gcgtcggtta ccggttgatg gccgaccgct gatgggcacc ctgcgccgct ccggcctgag
     7021 ccgccacatc atcgtctcga tgtcgctgat ggtgatcggc gtgatcgtga tgatgatcct
     7081 gtcgtcgtgg ctgttgtatg cggtgctggt cgagttcttc cccggcagtg ccgaggagcc
     7141 ggaaagctgg ctgcctaccg ggccggagct ggcgtggatg gtcggggtga tcctgaccgg
     7201 actggccctg gccatcgccg cctcgttccg gcttgcgcac cgcatcctgt cgccgttgaa
     7261 ttcgctggtc gacagcgtcc gcgcgctggc cggcggcgat ctcggtgcac gcgccagtgt
     7321 cgaagaaaac tcgccgggcg aagtagccac cctggtcgaa gacttcaatg cgatggcgcg
     7381 gcgcctgcag cacatggaga gcgagcgggc catgtggcac gccgccatcg cccacgagct
     7441 gcgcacgccg gtgacgatcc tgcgtggccg cctgcagggg ctggccgagg gcgtgttcca
     7501 gcctgacgaa tcacagttcc gcagcctgct tgcccaggtc gagggcctgt cgcgcctgat
     7561 cgaggacctg cgcgtgctga gcctgtccga caatgcacgg ctggacgtgc gccgcgcgcg
     7621 caccgacgtg gtggccgagg tgcattcggt gatgaccctg gtcgacccgc agttccgcac
     7681 cgccggtttc gtgctggaac tggaaaccag ccgcgaggaa cacaccgcgc actgcgatcc
     7741 gacccggctg cgccaggcgc tgctggcact gctggagaac gcgcgtcgct acgccagccc
     7801 gggcaaggta cggattgccg tgcatgacac gccggggcat gtacaggtgg ccatcgaaga
     7861 cgagggaccg ggcatcgacc ccgccctgca cgccgatatc ttcactccgt tcatgcgcgc
     7921 cgacggttcg cgttcgcgcc agggcggcgg cagcgggctc ggcctggcgg tggtcaaggc
     7981 catcgccgac gcccacggtg gccgcgtcta ctgcatgccg ggcagcgccg gcggcagccg
     8041 cttcgtcatc gaactgccgc gccagtaggc gagctggcgg cctgcgtgcg caggtgtgca
     8101 ccaagcgcgg ccagattggc atcgatcgca tccatttcct cgcgctggtt caccggcaac
     8161 tgctggcgca gctgcaggcg cagcgcccgc cacgccggca ccgcctgcgc actggcagtg
     8221 gccacggcgt gcatcaggag cgcctgttcg tcggccaacg gcaatccata gccatcgccc
     8281 tgcagtaacg tacccggacg cagccattgc ccactctgct ccagtagccc gcgcaggttg
     8341 cgggtctggg cactgtccgg tgcacccagc agctgccgct tgagcacatc gcgcgcgcgc
     8401 agttcggcac gccgttgcgc agcctgctcc agcagcagca ggcccgcgct ggcgcgcagg
     8461 tcgccctgca acagccacgg tgcccgctgc cgtccgggca gcttcagcca gccgcgtaca
     8521 tcgcgcgtgg gcagcgccag ctggccggca gccacatcga acaactgctg gaagtggtca
     8581 cgcgccgagg caaagtaata gccctgcgcc tgcgctgaat cgcgatcggc cagcacctgc
     8641 tcgtccagca cctgcaggcg cgccagccgg cgcttcagcc cgcgcgggct cagctgcgcc
     8701 aggccggcgc tcccgagcct aggcacaccg gcctgcagca gcttcgcggt ctccaccgcg
     8761 cagttgttgc tgacgaagta atagcgcccg tcatagctcc agtgcacctg cgcggtacgc
     8821 tcgagcaggc tggcgatctc gtcgcgttcc agctgcagcg gcaacgactg cagcccgcga
     8881 agttcgacct tggtgtactc gtccaccacc tgctgcagtg gcagcacgaa cagccgcgag
     8941 ggataaccgc cggtcaggcc gcgccagttt gaaatctgca cgtcgccgac gaaggcacgg
     9001 aacgacagca cgcggtggta ctccaggtcc aggcgacagt ccggccccgg cgcgcggcct
     9061 ggccggcaga tcaccagccg cagcatgctg tggccccagc ggctcatcgg ctgcgcgctg
     9121 ccttcggcga acaggtagtc caccgcgtaa acccgcgagg gatccagctg cagcagtgat
     9181 gccgccccct cttccggttc cgcctgcagc aacggaacgc ggctatcgca ctgcggcttc
     9241 ggcagcgacg gcggcgtgcc gaagtgcccc tggtaccact gcgccagtgc cgggcgacgg
     9301 caggcgaact cggcatccag cacgaaatgc tcggcgttca ccgccagata ctcagcaggg
     9361 tctttcagct cgtaaccgtc cgggctgcga gcacggaagt cgttgtggcc gcgaccgaga
     9421 tgccacggct tgcgttgcca ccctgccaga tcgcgccaac gcgcactgcg cgaccagcca
     9481 gcaccaccac gatccgcgac atgggtcagt tcgtgcacca gtgcgctgcg tcgcgcccgt
     9541 cgcgcaccgg gcacgcggtc gtccagcagg tcgcggcgca gcgtgatgcg gccagcaaat
     9601 gcacggccat gcacctcggc gggcaggtca gcgccccagc gcacctgtac ctgggtcggc
     9661 aaggcacgta gcaggccgtc cggcagcagt gactgcacat cggccagggt ctggccagcc
     9721 acctgctgct gcacagggct cagccctgcc ggatccagct gcaggcggtc ggctgcgtgc
     9781 gcgacgtggg cgatcagcag tag
//
LOCUS       DAOKIP010000152         9790 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.152,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000152 DAOKIP010000000
VERSION     DAOKIP010000152.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 9790)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9790)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9790
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.152"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            89..709
                     /locus_tag="QEL58_002974"
     CDS             89..709
                     /locus_tag="QEL58_002974"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase"
                     /protein_id="HDS1677419.1"
                     /translation="MLKIWGRRNSSNVRKVLWCAEEIGLPYESIEVGGSHGGTQTPEY
                     LAMNPNSLVPVIEDHGLPLWESNAIVRYLSARYALGTLYAEDPMQRAQAEKWMDWSTS
                     RMAPIYSDLIWGIMRTAPADRDEARINAAIVRAGDYLAMADATLARQPWLSGDTFAMG
                     DIPLGSLIYAWFELPIQRPELPHLADWYARLRERPAYQRGVMSPLT"
     gene            complement(805..2982)
                     /locus_tag="QEL58_002975"
     CDS             complement(805..2982)
                     /locus_tag="QEL58_002975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017167545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal protein N'"
                     /protein_id="HDS1677420.1"
                     /translation="MLSPIPTLQVALPVPLPRLFDYLSPEGDAPAVVVGCRVKVPFGN
                     RELVGVVVGHGQADDGQGLRQALAWCDPQALLQGELWQSLQWLARYTHAPLGEVLSTA
                     LPGPLRHGEALPETHHWGWQLTHEGRAQREKLRAGSRPRQLAELLAEAVVDEDVLGER
                     MDDWRTAARSLAKRELAERVALSVAPQHAQPLPGPTLNPDQAEAVAAINAADGFQPFL
                     LDGVTGSGKTEVYLQAIIHCLAQGRQALMLVPEIGLTPQTLARFRGRLGIAVHALHSG
                     LNDNERARVWAAASRGEARVIVGTRSAVFTPLPQAGLLIVDEEHDGSYKQQDGIRYHA
                     RDFALVRAKALGIPVLLGSATPSLETLHNAYAGRYTHLRLKQRAGDARPPRVRILDVR
                     KRPLHDGLSADVLAGIGEHLQRGQQVLVFKNRRGYAPVLLCHDCGWTAPCNRCDAPMT
                     VHGGGRRLQCHHCGARQPAPLACPACGSLALQPQGIGTERLEEHLTAAFADFPVVRID
                     RGTTSRRDALEQQLAKLGDRPGILVGTQILAKGHDLPKLTLVVVVGIDEGLFSADFRA
                     SEKLAQQLIQVAGRAGRARDPGEVWLQTHHPGHPLLETLVNGGYHPFAQAELNQRQAA
                     GFPPFAHLALMRAEAQQVEHANAFLLAARQLLGEQNVVEAYGPMPAPMPRRAGYQRTQ
                     LLLSALQRPPLHSVLAQLVPQLYALPEARKVRWSLDVDPTDLY"
     gene            3395..4399
                     /locus_tag="QEL58_002976"
     CDS             3395..4399
                     /locus_tag="QEL58_002976"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006396214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677421.1"
                     /translation="MTAVPAPVSSTAAGALSAFLRGVERRALVVAELQCGDAARAEQT
                     LVAVMRAFAAVASDLPMAQWPTRFWTLLGQRQALREPVGGQWAPPLAALGGMDPLPRL
                     ALLLRVGGSLDEGIAMRVLDQDEAGYQHLLANACPRDAHGQPDASAWRQLAEQVQLRI
                     RDLPAKRLQQLQQPAAPAAHNEPVTSSWRAPPQEARAAANGKRRRPTAKPRWRGPLIL
                     LLTVAVLLAAALGWRYLQGRSFGAAAPLPEGVVGEAGPVTVEALPPSTVNAAPDTTPS
                     QAADDATMLADRDYPLLADADLYAWTAAGGPLPVDESQSRPSRPEPASATLETTAADE
                     "
     gene            4392..4967
                     /locus_tag="QEL58_002977"
     CDS             4392..4967
                     /locus_tag="QEL58_002977"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019338930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3106 domain-containing protein"
                     /protein_id="HDS1677422.1"
                     /translation="MNKTLFASALLALPLSLSAAPQTLNVPLPAPAPGVEATAPAPAV
                     APSAFAQLDAAQQRQRRADYAAWRALPEGERERIRQAATRFNALPADQQQRLRQQFQA
                     QDQAFREGWRLGPQLGLVFPKLHGLFGYVPPQQREAALAVLRQLSPAQLAQLALVAQR
                     TPPQERDAVRSAFLAVPAAERDTWLKRQAGQ"
     gene            5168..6532
                     /locus_tag="QEL58_002978"
     CDS             5168..6532
                     /locus_tag="QEL58_002978"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012481373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HDS1677423.1"
                     /translation="MSTATSTPRFSKEVGATGLLALPLVLGHVSTGLISFVDNVIAGH
                     HATATLAAVTIGTALLWLPMLIPIGTLISLTASVSQLHGAGREREIGPLFRQALWLAL
                     GLGLIMFTFLTVVPPLLPAFGIAPDIVPGATAFLHAVRWGGPALTLYFCMRYLSEGMH
                     WTLPTMLLGFGGLLVLAPMGYVLANGKLGFPEMGAEGLGIASAVMMWLQAIAFATYLW
                     FTKRFAHLQLFSHFEGPRWKAIWELLRTGLPIGITVLMEGGLFIVTALLIGRLGANEA
                     AAHQIAINVAQLCFMIPMGVAEATTVRVGHAVGRGDGFGVRRAAWAGYAIIMGTQTLS
                     AAVLLFGHDAIVGVYTNDLAVAGLASTLLLYAATFQFPDGIQVLSAGALRGLKDTRVP
                     MFIAMFAYWGLGMPLGAGLGLGLGMGPQGMWIGLIVGLTAAAILMGWRLRRSSLRIGQ
                     STLS"
     gene            6649..8571
                     /gene="sppA"
                     /locus_tag="QEL58_002979"
     CDS             6649..8571
                     /gene="sppA"
                     /locus_tag="QEL58_002979"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019338929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptide peptidase SppA"
                     /protein_id="HDS1677424.1"
                     /translation="MNQPVPPLPPARRNPVASFFIGLWDVMNFTRRLILNLVFFGLLF
                     LLLVMFVIAAGMGAGASKSLQDRTTLVIAPEGRLVEQFSADPVSRALAKAVGDNGAEE
                     IQLRDLLRVIESAKEDKKIERVVLELDKLQPSGFASLREVASALQDLRASGKQLVAYS
                     ESMGQSQYLLAAQADEVYLDPMGSVVLEGLGRYRQYFRTGLQDKLGVDVHLFKVGEYK
                     SAAEPYVLDAASPASKEADLFWMNDVWQRYLADIAKARRLDPAQLAAGIDTLPEGIAA
                     AGGDLAKFALQQKLVTALKTREEFEDLMIERGVADDDADGGFRNVDFGRYLALLDARR
                     NPVDSRPQVAVVVAEGEISGGDLPAGRIGGESTSALLRAARDDENVKAVVLRVDSPGG
                     EVFASEQIRREVVALQAAGKPVVVSMGDLAASGGYWISMNADRIYADPSTITGSIGIF
                     GMVPNFSRALDKIGVHTDGVGTTRFAGAFDVTRPMDPAVGQVIQTVINKGYADFTGRV
                     ADARKKPVEAVDEVARGRVWSGAQAKERGLVDAFGGLKDAVADAASRAKLGKADAYRV
                     RYIEKAATPFAQFVSGFAGSRAGAWMLSDSGMARMMLARTMPEVDTQLRFVENAAREK
                     GNGAPVKALAYCFCGF"
     gene            complement(8676..8888)
                     /locus_tag="QEL58_002980"
     CDS             complement(8676..8888)
                     /locus_tag="QEL58_002980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014648573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677425.1"
                     /translation="MRMLILSSPLLATVLLAGCQRPPAPNPEKPPVPRAMSRAINQPL
                     DRAKGVQKTVDDAAARERTAEAEATQ"
     gene            9000..9776
                     /locus_tag="QEL58_002981"
     CDS             9000..9776
                     /locus_tag="QEL58_002981"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016903673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HDS1677426.1"
                     /translation="MTQQRWRLDGQTALITGASAGIGLAIAHELAGLGADLMIVGRDI
                     DMLETARDELLDVYPQHQVHALAADVSDDEDRRQILDWVEDHSDGLHILVNNAGGNVT
                     KAATEYSEDEWRQIFETNLFSAFELSRYAHPLLARHASSSIVNVGSVSGLTHVRSGVV
                     YGMSKAAMHQMTRNLAVEWAEDGIRVNAVAPWYIRTRRTSGPLSDPDYYEEVINRTPM
                     RRIGEPDEVAAAVGFLCLPAASYVTGECIAVDGGFLRYGF"
BASE COUNT         1487 a         3310 c         3397 g         1596 t
ORIGIN      
        1 cagaagccag atcccgcatc cggcgtgcac acacccacac caatcaggcg tatcgttgcc
       61 gctcgcattg ccagcaggga atacccgcat gttgaagatc tggggccgtc gcaattcaag
      121 caacgtccgc aaggtgctgt ggtgtgccga agaaatcggc ctgccgtatg aatccatcga
      181 agtcggcggc agccacggtg gcacgcagac gccggagtac ctggcgatga accccaacag
      241 cctggtgccg gtgatcgaag accatggcct gccgctgtgg gaatccaacg cgatcgtgcg
      301 ctacctgagc gcgcgctacg cgctgggcac gctgtacgcc gaagacccga tgcagcgcgc
      361 ccaggccgag aagtggatgg actggagcac ctcgcggatg gcgccgatct acagtgacct
      421 gatctggggc atcatgcgca ccgcgccggc cgaccgtgac gaagcgcgga tcaacgcggc
      481 catcgtgcgt gccggtgact acctggcgat ggccgacgcg accctggccc ggcagccgtg
      541 gctgtccggc gatacgttcg cgatgggcga catcccgctg ggctcgttga tctatgcctg
      601 gttcgaactg ccgatccagc gcccggaact gccgcacctg gccgactggt atgcgcgcct
      661 gcgcgaacgc ccggcctacc agcgcggcgt gatgtcgccg ctgacgtaag cggtggcgtt
      721 cggcgtagcg tcgagtttgc tcgactgctt atggcgcacg gcagccgagc aagctcgacg
      781 ctacgcagta ccggttgcca gacctcaata cagatcggtc ggatccacat ccagcgacca
      841 gcgcaccttg cgcgcttccg gtagcgcata cagctgcggc accagctgcg ccagcacgct
      901 gtgcagtggc ggccgctgca gtgccgacag cagcagctgc gtgcgctggt aaccggcacg
      961 gcgcggcatc ggtgccggca tcggcccgta ggcctccacc acgttctgct cgcccagcag
     1021 ctgccgtgcc gccagcagga aggcgttggc gtgctcgacc tgctgcgctt ccgcgcgcat
     1081 caacgccagg tgcgcgaagg gcgggaaccc ggcggcctgg cgctggttca attcggcctg
     1141 cgcgaacggg tggtagccac cgttcaccag ggtctccagc aacggatgcc cgggatgatg
     1201 ggtctgcagc cagacctcgc ccgggtcgcg tgcgcggccg gcgcggccgg ccacctggat
     1261 caactgctgc gccagtttct cgctggcacg gaagtcggcc gagaacaggc cctcatcgat
     1321 gcccaccacc accaccaggg tcagcttggg caggtcgtgg cccttggcca ggatctgcgt
     1381 gccgaccagg atgccgggcc ggtcgcccag cttcgccagc tgctgttcca acgcatcgcg
     1441 gcgcgaggtg gtgccacggt cgatgcgcac caccgggaaa tcggcgaagg ccgcagtgag
     1501 atgttcttcc aggcgttcgg tgccgatacc ctgcggttgc agcgccaggc tgccgcaggc
     1561 cgggcatgcc aacggtgccg gctgccgtgc accgcagtga tggcactgca ggcgccggcc
     1621 accgccatgc acggtcatcg gtgcatcgca gcggttgcac ggcgcggtcc agccacagtc
     1681 gtggcacagc agcaccggcg catagccgcg gcggttcttg aacaccagca cctgctggcc
     1741 acgctgcagg tgctcgccga tgccggccag cacatcggcg gagagaccgt catgtagtgg
     1801 ccgcttgcgt acatcgagga tgcgcacgcg cggtggccgc gcatcgccgg cgcgctgctt
     1861 caggcgcagg tgggtgtagc gcccggcata ggcgttgtgc agcgtttcca gcgagggcgt
     1921 ggcgctgccc agcaagaccg gaatgcccag tgccttggcc cgcaccaggg cgaaatcgcg
     1981 cgcatggtag cggatgccgt cctgctgctt gtagctgccg tcgtgttcct cgtcgacgat
     2041 cagcaggccg gcctgcggca gtggcgtgaa caccgccgaa cgcgtgccga cgatgacccg
     2101 tgcctcgccg cgcgaagcgg cggcccagac gcgcgcacgt tcgttgtcgt tcaaacccga
     2161 atgcagtgcg tgcacggcga tgccgaggcg gccgcggaac cgcgccaggg tctgcggggt
     2221 caagccgatt tccggtacca gcatcagcgc ctgccggccc tgtgccaggc aatggatgat
     2281 cgcctgcagg tagacctcgg tcttgccact gccggtcacg ccatccagca ggaacggctg
     2341 gaagccgtcg gccgcgttga tcgcggccac ggcctcggcc tggtccggat tgagcgtggg
     2401 gccgggcagc ggctgcgcgt gctgtggggc cacgctcagc gcaacgcgct cggccagctc
     2461 gcgcttggcc aggctgcgtg cggcggtgcg ccagtcgtcc atgcgctcgc ccagtacgtc
     2521 ttcatccacc acggcctcgg ccagcagctc ggccaactgg cgggggcggc tgccggcgcg
     2581 cagtttttca cgctgggcgc ggccttcgtg ggtcagctgc caaccccagt gatgggtctc
     2641 gggcagggcc tcgccatggc gcagggggcc gggcagggcg gtgctgagga cctcgcccag
     2701 cggtgcgtgg gtgtaacgcg ccagccactg caggctctgc cacagctcgc cctgcagcag
     2761 cgcttgcggg tcacaccagg ccagcgcctg gcgtagtccc tggccgtcgt cggcctggcc
     2821 gtggccgacc accacgccga ccagctcgcg gttgccgaag ggcaccttca cgcggcagcc
     2881 gaccaccacg gcaggggcgt cgccctccgg cgacaggtag tcgaacaggc gcggcagcgg
     2941 gacgggcagg gcgacctgca gggtcggaat cggtgaaagc atcgggccag tgtaacgggc
     3001 catgcgcgca cggatggcgc ggcccggggc gctggagcga cggcggttga atcataaatg
     3061 tcacctaaat atcggtgtcc attggagatt cagtcttatc cacatgttct gtggataacg
     3121 ttgtgcgtta ccggtcgacg ggcgcgcagg aggccgatgg cgacggcctc acgcttgggt
     3181 tggtcaaaaa atcgccacat gagaaaagcg atataaatca acaagttgag tgtgaaacat
     3241 tgctgaaaca gagtggattc agctggatgc cccagttttg cccgaggggg gcgtggtgct
     3301 gtgcacaacc tgcagcacga agtgccagcg ggcgcaagtc ctacgggcgt cgatggcctg
     3361 ccgctatcat gccggcagac ctttggagtg accgatgacg gctgtgcccg cccctgtttc
     3421 ctcgaccgcg gccggcgcgc tgtcggcgtt cctgcgtggt gttgaacgcc gtgccctggt
     3481 ggtggctgaa ctgcagtgcg gcgatgccgc ccgcgccgag cagaccctgg tggcggtgat
     3541 gcgcgccttt gccgcggtgg ccagcgacct gccgatggca cagtggccga cccgcttctg
     3601 gaccctgctg ggccagcgcc aggcactgcg cgagccggtg ggcggccagt gggcgccgcc
     3661 gttggccgca ttgggcggga tggacccgct gccgcgcctg gccttgttgc tgcgggtggg
     3721 cggcagcctg gacgaaggca tcgccatgcg cgtgctcgac caggacgaag cgggctacca
     3781 gcacctgctg gccaatgcct gcccgcgcga tgcgcacggc cagcccgacg cgtcggcctg
     3841 gcgccaactg gccgaacagg tgcagctgcg catccgcgac ctgccggcca agcgcctgca
     3901 gcagctgcag cagccggccg caccggccgc ccacaatgaa cccgtaactt ccagctggcg
     3961 cgcgccgccg caggaagcgc gtgccgccgc caatggcaag cgccgccgcc cgactgccaa
     4021 gccgcgctgg cgcggcccgc tgatcctgct gctgaccgta gccgtactgc tggcggcggc
     4081 gctgggctgg cgctacctgc agggccgttc gttcggtgcc gcggcaccgt tgccggaagg
     4141 cgtggtcggc gaggcaggcc cggtcacggt ggaggcgttg ccgccgagca cggtcaatgc
     4201 cgcgccggat acgacgcctt cccaggccgc agacgacgcc acgatgctgg ccgaccgcga
     4261 ctacccgctg ctggccgatg ccgatctgta tgcgtggacc gccgcaggcg gtccgttgcc
     4321 ggtggacgaa tcgcaatcca ggccgagccg gcccgagccg gccagtgcca cgctggaaac
     4381 caccgctgcc gatgaataag accctgttcg ccagcgcgct gctggccctg ccgctgtcgc
     4441 tgtccgccgc accgcagacc ttgaatgtgc ccctgcctgc gccggcgccc ggcgttgagg
     4501 cgacagcacc ggccccggcc gttgcgccgt cggccttcgc gcagctggat gcagcgcagc
     4561 agcgccagcg acgtgccgac tacgccgcgt ggcgggcgct tccggaaggc gagcgtgagc
     4621 gcatccgcca ggccgcgacg cgattcaacg cgttgccggc cgaccagcag cagcgcctgc
     4681 gccagcagtt ccaggcgcag gaccaggcct tccgcgaagg ctggcgactg ggcccgcagc
     4741 tgggcctggt gtttcccaag ctgcatggcc tgttcggcta cgtgccgccg caacagcgcg
     4801 aggccgcgct ggccgtgctg cgccagctca gcccggccca gctggcacag ctggccctgg
     4861 tcgcacagcg cacgccgccg caggaacgcg acgcggtgcg cagcgccttc ctcgcggtgc
     4921 ccgccgccga gcgtgacacc tggctcaagc gccaggccgg acagtaaaaa aagggacgga
     4981 ggggattaag tcgtattcgg aacaattggg tctgaaacga cttaatcccc tccgtcccct
     5041 ttttgtggct ggaacccagc attcacaccg tgtcatggga atgcgcgcgc tgcgcgcgta
     5101 agatgaccgg ccgcaaaccc ggtgcctgtg cccttcgcgc gcaaccgtag ttcgcgtcaa
     5161 gcaccttatg tctactgcaa cctccacgcc gcgcttcagc aaggaagtcg gcgccaccgg
     5221 tctgctcgcc ctgccgcttg tgctgggcca tgtctccacc ggcctgatct ccttcgtcga
     5281 caacgtgatt gccggccacc acgccaccgc gaccctggcc gcggtgacca tcggcaccgc
     5341 cctgctgtgg ctgccgatgc tgatcccgat cggcacgctg atctcgctca ccgcctcggt
     5401 atcgcagctg cacggcgctg gccgcgagcg cgagatcggc ccactgttcc gccaggcact
     5461 gtggctggca ctgggcctgg gcctgatcat gttcaccttc ctcaccgtgg tgccgccgct
     5521 gctgccggcc ttcggcatcg caccggacat cgtgccgggc gcgaccgcgt tcctgcatgc
     5581 ggtgcgctgg ggcggcccgg cgctgaccct gtacttctgc atgcgctacc tgagcgaggg
     5641 catgcactgg acactgccga ccatgctgct tggcttcggc ggcctgctgg tgctggcgcc
     5701 gatgggctat gtgctggcca acggcaagct cggtttcccg gaaatgggtg ccgaaggcct
     5761 gggcatcgct tcggcggtga tgatgtggct gcaggcgatc gccttcgcta cctacctgtg
     5821 gttcaccaag cgcttcgccc acctgcagct gttctcgcac ttcgaagggc cgcgctggaa
     5881 ggcgatctgg gaactgctgc gcaccggcct gccgatcggt atcaccgtgc tgatggaagg
     5941 tggcctgttc atcgtcaccg cgctgctgat aggccgcctg ggcgccaacg aggcggccgc
     6001 gcaccagatc gcgatcaacg tcgcgcagct gtgcttcatg attccgatgg gcgtggccga
     6061 ggccactacc gtgcgcgtcg gccatgccgt cggccgtggt gacggcttcg gtgtgcggcg
     6121 tgcggcgtgg gccggttacg cgatcatcat gggcacgcag acgctgtcgg cggcggtgct
     6181 gctgttcggc cacgatgcca tcgtcggcgt gtacaccaac gatctggcgg tggccggcct
     6241 ggcctcgacc ctgctgctgt acgcggccac cttccagttc ccggatggca tccaggtgct
     6301 gtcggccggc gcgttgcgcg gcctgaagga cacccgcgta ccgatgttca tcgccatgtt
     6361 cgcgtactgg ggcctgggca tgccgcttgg cgccgggctc ggcctgggcc tgggcatggg
     6421 cccgcagggc atgtggatcg gcctgatcgt gggcctgacc gcggccgcca tcctgatggg
     6481 ctggcgcctg cgccgcagca gcctgcgcat cggccagtcc accctgtcct gatccttcct
     6541 gcccgccatg ctgacccatg gcgggcgatc ccctgacttg tgtccgatgc cgcatcacac
     6601 ggcaccggct atgctggtac cacggcaaga agccatccgg agcgttccat gaatcaaccc
     6661 gtgcccccgc tgcccccggc gcgtcgcaat cccgtcgcca gcttcttcat cgggctgtgg
     6721 gacgtcatga atttcacccg ccggttgatc ctcaacctgg tgttcttcgg cctgctgttc
     6781 ctgctgctgg tgatgttcgt cattgctgcc ggcatgggcg ccggtgccag caaatcgctg
     6841 caggaccgca ccaccctggt gatcgcgccg gaaggacgcc tggtcgagca gttcagcgcc
     6901 gatccggtca gccgcgcgct ggccaaggcg gtgggcgaca acggtgccga ggagatccag
     6961 ctgcgcgacc tgctgcgggt gatcgagtcg gccaaggaag acaagaagat cgagcgcgtg
     7021 gtgctggagc tggacaagct gcagccgtcg ggcttcgcct cgctgcgcga agtggcgtcg
     7081 gcgctgcagg acctgcgcgc gtccggcaag cagctggtgg cctacagcga gagcatgggc
     7141 cagtcgcagt acctgctggc cgcacaggcc gacgaggtct acctggaccc gatggggtcg
     7201 gtggtgcttg agggcctggg ccgctaccgc cagtacttcc gcaccggcct gcaggacaag
     7261 ctgggcgtgg acgtgcatct gttcaaggtg ggcgagtaca agtccgccgc cgagccgtac
     7321 gtgctcgacg ccgcctcgcc ggcctccaag gaggccgacc tgttctggat gaacgacgtg
     7381 tggcagcgct acctggccga catcgccaag gcccgccgcc tggatccggc ccagctggcc
     7441 gccggcatcg acaccttgcc ggagggcatc gccgccgccg gtggcgacct ggccaagttc
     7501 gccctgcagc agaagctggt aaccgcgctg aagacccgcg aggaattcga ggatctgatg
     7561 atcgagcgtg gcgtggccga tgacgatgcc gacggcggtt tccgcaacgt cgacttcggg
     7621 cgctacctgg cgctgctcga cgctcgccgc aacccggtgg actcgcgtcc gcaggtggcg
     7681 gtggtagtgg ccgaaggcga gatcagcggt ggcgacctgc cggccggccg tatcggcggc
     7741 gagtcgacct cggcgctgct gcgcgccgcg cgcgacgatg agaacgtcaa ggccgtggtg
     7801 ctgcgcgtcg attcgccggg cggtgaagtg ttcgcctccg agcagatccg ccgcgaagtg
     7861 gtggccctgc aggcggccgg caagccggta gtggtgtcga tgggcgatct ggctgcgtcc
     7921 ggtggttact ggatcagcat gaatgccgac cgcatctacg ctgatccgtc gaccatcacc
     7981 ggttcgatcg gcatcttcgg catggtgccg aacttcagcc gcgcgctgga caagatcggc
     8041 gtgcacaccg acggcgtcgg caccacccgc tttgccggtg ccttcgacgt cacccgtccg
     8101 atggacccgg ccgtcggcca ggtcatccag acggtgatca acaagggcta tgccgacttc
     8161 accggccgcg tcgccgatgc gcgcaagaag ccggtcgagg ccgtcgacga agtggcccgt
     8221 ggccgcgtgt ggagcggtgc gcaggccaag gaacgtggcc tggtcgatgc cttcggtggc
     8281 ctgaaggatg ccgtggccga cgccgccagc cgcgccaagc tgggcaaggc cgatgcctac
     8341 cgcgtgcgct acatcgagaa ggcggcgacg ccgttcgcgc agttcgtcag cggtttcgcc
     8401 ggcagccgcg ccggtgcctg gatgctgtcc gactcgggca tggcgcggat gatgctggcc
     8461 cgcacgatgc cggaagtgga cacgcagttg cgcttcgtcg agaacgcagc ccgcgagaag
     8521 ggcaacggtg cgccggtgaa ggcgctggcg tactgcttct gcgggttctg atcggagcgc
     8581 ctatccacgc atggcgtgga tctactggca cggccacgca tggcgtggat ctactggaaa
     8641 cgcccggctt cggccgggcg ttttcgtttg cggggttact gcgtcgcctc ggcttcggcc
     8701 gtgcgttcac gcgcagcggc atcgtccacg gttttctgca cgcccttggc gcggtccagc
     8761 ggctggttga tcgcgcgcga catcgcccgg ggtaccggtg gcttttcggg gttcggcgcc
     8821 ggtgggcgct ggcagcccgc cagcagcacg gtggccagca ggggcgagga caggatcaac
     8881 atgcgcatgg cggctctccg cggtgggcgt acgggcagtg tcgcaccccc ggcaggcagc
     8941 cgccgtgagc gcgtatcctt gcggcatcga aacacagcgg gcgcggcccc ggaggacaca
     9001 tgacccagca acggtggcgc ctggatggcc agaccgccct gatcaccggc gccagcgccg
     9061 gtatcggcct ggcgatcgcg catgaactgg ccggcctcgg tgccgacctg atgatcgtcg
     9121 gccgcgatat cgacatgctg gagacggcac gcgacgaact gctggacgtg tatccgcagc
     9181 accaggtgca cgcgctggct gccgatgtct ccgatgacga ggaccgccgc cagatcctgg
     9241 actgggtgga agatcacagc gatggcctgc atatcctggt caacaatgcc ggtggcaacg
     9301 tcaccaaggc ggccacggaa tactccgagg acgaatggcg ccagatcttc gagaccaacc
     9361 tgttctctgc gttcgagctg tcgcgctacg cgcatccgct gctggcccgg cacgcgtcgt
     9421 cgtcgatcgt caatgtcggc agcgtgtccg gcctgaccca tgtgcgcagt ggcgtggtgt
     9481 acggcatgag caaggcggcg atgcaccaga tgacccgcaa cctggccgtc gagtgggccg
     9541 aggatggcat ccgggtcaat gcggtggcgc cgtggtacat ccgtacgcgg cgcacgtccg
     9601 gtccgctgtc ggacccggat tactacgagg aagtgatcaa ccgcacgccg atgcgccgca
     9661 ttggcgagcc cgatgaagtg gccgcagccg tgggcttcct gtgcctgccg gcagccagct
     9721 atgtcaccgg cgagtgcatc gcggtggatg gcggtttcct gcgctacggg ttctgatcgt
     9781 tcgagggtag
//
LOCUS       DAOKIP010000153         9786 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.153,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000153 DAOKIP010000000
VERSION     DAOKIP010000153.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 9786)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9786)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9786
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.153"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..395)
                     /locus_tag="QEL58_002982"
     CDS             complement(<1..395)
                     /locus_tag="QEL58_002982"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008268388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677427.1"
                     /translation="MIEMIEMLLMLWVLPSLLTLALLLLMLFGAPRWRGNPWVYRAGF
                     ALLGACLTPTLFAAGHGGLPCATIGGLVMILTQLQWIGDLQADVMGIGIRNRGIWIMS
                     TPALMVFAALMFVPLRTARPARFGFGDDG"
     gene            582..1409
                     /locus_tag="QEL58_002983"
     CDS             582..1409
                     /locus_tag="QEL58_002983"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005414768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HDS1677428.1"
                     /translation="MSAAGKALWYIETHADSPLALADIAAAAGLSPFHLSRLFQARTG
                     TSVVRYLRGRRLSAAAQRLAEGAGDILPVALAAGYTTHAAFTRAFCEQFGQTPERVRE
                     NGIAGLALVQAIRVDEAPAACTEAPRLLDTPAFQVAGIGMRHTRDSGGAIPGQWAQLN
                     REWPTPAPISFGVCCNSDDDGGFDYIAALPASARSTVPAHWQRVTVPARRYLVAWHGG
                     HISSIRSTWFWLLDHYLPHSGLSLADAPDLERYDARFDEHTGNGGVEIWLPVDQRPR"
     gene            1423..2535
                     /locus_tag="QEL58_002984"
     CDS             1423..2535
                     /locus_tag="QEL58_002984"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012481509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HDS1677429.1"
                     /translation="MRMKATVLGMILIGLASVAAADETGLAGERHGTTTVDSAAVRDV
                     QHRDALRYTVWYPAQAGSRETALTIGPPDAPLFDVGRAALDAPVAGTRLPTLLLSHGN
                     GGSARMMGWLGTALARAGYLVIAVDHPGNNGADPMTLPGSVLSWLRADDLRAALAAVQ
                     ADPVLGAHVDRSRLGVVGFSAGGYTALLAAGARPDLQRLLAFCRAHPDDGVCRPQQEA
                     ATHTMEARLAAATSPALAPWISHSDDARALPGVRAVFLLAPAIVQAFAPGQLSSLQLP
                     VSIVLGDADKVAPPTSNGEAAQALIPGATLLRLADVGHYDFLSTCTAAGVQRLPDLCT
                     AATSTAGTHRRTVDAATGFFDAALREPHDNEPLHLR"
     gene            2594..3265
                     /locus_tag="QEL58_002985"
     CDS             2594..3265
                     /locus_tag="QEL58_002985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HDS1677430.1"
                     /translation="MRLLHLTLPVSDVATVAAYFHDVLQQRVVGNHVHVGWSTIELQP
                     AADHPVGGVHLAFNVPDNRFGEAMAWLRERTALQRNPAGLDYFALESSWQSQSVYFTG
                     PDGLILELIGRRRLPGSTRQGAFHGGELTCLSEVGLPSHDVDSVREQASQRFGLQPIS
                     PPSPQFAPMGDDEGLLIVVAADRRWFPEQKDLPNAQGLQLQVGDVGGAGVVEDASLGW
                     RVQAA"
     gene            complement(3267..4670)
                     /locus_tag="QEL58_002986"
     CDS             complement(3267..4670)
                     /locus_tag="QEL58_002986"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012481511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TPM domain-containing protein"
                     /protein_id="HDS1677431.1"
                     /translation="MSGLRAVRRTWATVGLLLLCLLPMMAMAAVAVPALDDPVVDTAH
                     ALSVDTRNALRTQALQLQARTGAQLQVLVVDQVGDEGIEAYAQRVFEQWQLGRAGVDD
                     GVLLLVAVQDRRVRLQTGYGLEGAIPDAYAARIIDKAIVPRFREGDLDQGLLDGTKVV
                     VALIDGEALPGWEDPSARNVLPPDWRSADSVVALSLLAGFLAGLWRSPPSRPEARTPD
                     DFARRHRQRRRGTSRAAATPQTRPKRLPAWGRPVLVTAVIAAGVLAAALWAPRQAMAA
                     LCFVLALCVPVASLLGWCWRRSRGLRVVLLGLLGANGVFFGVMLLRGQLPPSLALHVL
                     LDLAVGIAAMLVFFIVQAGRARWHKDRGSFAVRFTVLLLLSAGYALFALLAIDRAEPA
                     ARLAATIGWSAGTLVLYFVWIFTLLPADRARGGLRSSGGSRSASSSASSRSSSSSSSD
                     WSGGGGRSGGGGASGSW"
     gene            complement(4667..6502)
                     /locus_tag="QEL58_002987"
     CDS             complement(4667..6502)
                     /locus_tag="QEL58_002987"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012512377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase"
                     /protein_id="HDS1677432.1"
                     /translation="MQARRMRTTAAVAVMLAMAPLAGIRAESLQADDRAYFADAAAEQ
                     RARDALEKQLEALQHAAGIAPAQRFQQAEAMQAQCLRHHAYLHLQAARNARDHRPAQA
                     LDQVMGLCSRIARTARAALREAPVDAEWTAPYAFLRARALKEAAVPADAALDEAVDAL
                     ADPALDSFARLRGQILRSAEYPQIERDGRHWDIGHDKQALARHPDRALREAGWKGYWQ
                     GLQSRREPMASVLLGLVQVNDAAARLQGDGSAPARGYQRMGLDTSAVDATLLAIEHHA
                     GDRRGYQNMLLRHAARSGIDAPQLWDTTVPDAGYTPPVLALPQLRDTAADAMQHLGPA
                     YVGELRALLDPANRRMDLATERGDRSLDAFPVSAPGAPAMLFVGVRSGELESDVEIAH
                     EAGHALHGEWMQRGHASPLQRNGSPWLTEAFAIYNELRFRDQLYQQAQDPRAKAYYLK
                     SLLDDMVLQLFTSSEEAQLEQSIYRGVADNTLGTADDLDALTGQVLARFGQDPEHYPQ
                     LRNSWIGKRLMYDDPNYLVNYLYAGLLAVQLYVQDQRDPERFRQRYLAVLGEGFDRAP
                     NEQVAQLLGQAPDWPALVDADLQVFNQLAAQLRALHARIEQGQGA"
     gene            complement(6580..7092)
                     /locus_tag="QEL58_002988"
     CDS             complement(6580..7092)
                     /locus_tag="QEL58_002988"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012481513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677433.1"
                     /translation="MRRYRSAAVLALACGVALVACTPEPPPTPTETAPAAPAPTSTAA
                     AVQPAPAPASAECPYPQFDAFLKHFGHEIALQEKATADPLLDSYIDAEAEPEPRKVES
                     RLALADVEWPVMPDPAALAGQGREMQVSALADGQRQVQIRTPDSSDQQTYTFAQAPCW
                     TLVKREDESI"
     gene            7174..7800
                     /locus_tag="QEL58_002989"
     CDS             7174..7800
                     /locus_tag="QEL58_002989"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005411490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677434.1"
                     /translation="MHRFLLLIGLLLPALWPAVAMAVDVREGDLLFVTAGRSGLSAAI
                     DDATGKQGAPSFDHVALVASAPKGWEVLHADEKGSRRQSLSAFRQDARAKHRQIVVYR
                     LRAPQQATIKDAVATARTMLGKPYNTSYVLNEDSYYCSDFIERAFRAHHVFALQPMNF
                     RNPQTGQIAQHWVDLYHGMGMEVPQDQPGTNPNDMSAAPVLQRIGVLE"
     gene            complement(7855..8013)
                     /locus_tag="QEL58_002990"
     CDS             complement(7855..8013)
                     /locus_tag="QEL58_002990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677435.1"
                     /translation="MAQQNQNPNQKQPGQQNQQDQQQGRRDQQQQQQQDQQRKERNQQ
                     QGGHDEEE"
     gene            complement(8286..9710)
                     /locus_tag="QEL58_002991"
     CDS             complement(8286..9710)
                     /locus_tag="QEL58_002991"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012481515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="short-chain fatty acid transporter"
                     /protein_id="HDS1677436.1"
                     /translation="MASTAAVQDGWMARAALRSAAWAEKWFPDAYVFAVLGVVIVALA
                     AMGFGSTPQATASAFGDGFWSLIPFTMQMAFVVIGGYAVATAPVVARFIDFLARVPRT
                     GRGAVVYVGLVSMLASLLSWGFSLVFGGLLVRALARRTELRMDYRAAGASAYLGLGAV
                     WAMGLSSSAAQLQANPASMPPGLVEITGVLPFTETIFLWQSIALTAVLILVSLLIAWL
                     TAPAAGSARTAEDFPGAAQAEPEPLQRRTRPGEWLEYSPLLTVLLSLLAFGWLFNEFA
                     NKPVVTAIANLNTYNFLFISLGLLLHWRPRSFLNAVAKAVPSTTGVLIQFPLYGGIAM
                     ILTHAAGGDGQTLAHRLSSLFVHVASTDTFALVMGVYSAVLGFFVPSGGGKWIIEAPY
                     VMQAANELKAHLGWAVQVYNAAEALPNLINPFWMLPLLGVLGLKARDIVGFTFIQLLV
                     HIPLVLGLLWLLGMTLAYVPPVMP"
BASE COUNT         1604 a         3459 c         3227 g         1496 t
ORIGIN      
        1 ttgccgtcgt cgccaaagcc gaaacgggcc ggccgcgccg ttcgcagcgg aacgaacatc
       61 agggcggcga acaccatcag ggcgggggtg gacatgatcc agatgcccct gttgcgaatc
      121 ccgatgccca tgacgtcggc ctgcagatcg ccgatccact gcagctgcgt cagtatcatc
      181 accagcccgc cgatggtcgc gcacggcaat ccaccgtgac cagccgcaaa caacgtcggt
      241 gtcaggcacg cgcccagcaa cgcgaagccg gcgcggtaca cccagggatt gccgcgccac
      301 cgtggtgcgc cgaacaacat cagcagcagc agcgccaggg tcagcagact gggcagtacc
      361 cagagcatga gcagcatttc gatcatctcg atcatcggcc gggctccact ggccgggcat
      421 cccacgccgt cgttcgcatc ttcctgctcc tgatctcgtc catgaagcgc acattgttgc
      481 tggtgtgctg gaagaggcaa agccccggcg gcgcaagaac tgctaaacga agcgccacgc
      541 gatccgctac tgtgcctggc atcggcttca gggaacggcg gatgagcgcg gcaggcaagg
      601 cattgtggta catcgaaacg catgcggatt caccgctggc actggccgat atcgcagcgg
      661 cggccgggct ttcgccgttc cacctgtcac gcctgttcca ggcccgcacc ggcacctcgg
      721 tggtgcgcta cctgcggggg cggcgcctga gcgccgccgc gcagcgactg gccgagggtg
      781 cgggtgacat cctgccggtg gcactggcgg cgggctacac cacccatgcc gcgttcaccc
      841 gcgccttctg cgaacagttc gggcagacgc cggagcgggt gcgcgagaat ggcatcgctg
      901 gattggcact ggtgcaggca atacgcgtgg atgaagcgcc ggccgcctgc acggaagctc
      961 cgcgcctgct cgacaccccc gccttccagg ttgccggcat cggcatgcgc cacacccgtg
     1021 acagtggcgg tgcgattccc gggcagtggg cgcagctcaa ccgcgaatgg ccaacgccag
     1081 cgccgatcag cttcggcgtg tgctgcaaca gcgatgacga cggcggattc gactacatcg
     1141 cggcactgcc ggccagcgcg cgatcgactg tacccgcgca ttggcaacgg gtcacggtgc
     1201 ccgcacgtcg ctatctggtg gcctggcacg gcgggcacat ctccagcatc cgctccacct
     1261 ggttctggct gctggaccac taccttcccc actcgggcct gagcctggcc gatgcgccgg
     1321 acctggaacg ctacgacgcc cgcttcgatg agcacaccgg caatggcggc gtggaaatct
     1381 ggttgccggt ggaccaacgc cctcgctgac atggagttga agatgcgcat gaaggccact
     1441 gtgctgggaa tgatcctgat cggcctggcg agcgtcgccg ccgccgacga aaccgggttg
     1501 gccggcgagc gccacggcac cacgacggtg gacagcgccg cggtgcgcga tgtgcagcac
     1561 cgcgacgcgc tgcgctacac ggtctggtat ccggcacagg ccggcagccg cgaaaccgcg
     1621 ttgaccatcg gcccgcccga tgcgcccctg tttgacgtcg gacgtgcagc gctggatgca
     1681 ccggttgcgg gcacgcgcct gcccaccctg ctgctctcgc atggcaatgg cggcagcgcg
     1741 cgcatgatgg gctggctggg cacggcgctg gcgcgcgccg ggtatctggt gatcgcggtc
     1801 gatcatcccg gcaacaacgg tgccgatccg atgaccctgc cgggcagcgt gctgagctgg
     1861 ttgcgtgccg atgatctgcg cgctgcgctg gcggcggtac aggccgatcc ggtgctcggt
     1921 gcacacgtcg atcgcagtcg attgggggtg gtcgggttct cggccggtgg ctacaccgcg
     1981 ctgctggccg ccggtgcacg gcccgacctg caacggctgc tggcgttctg ccgtgcacat
     2041 ccggatgacg gcgtctgccg gccccagcag gaggccgcca cgcacaccat ggaagcgcgc
     2101 ctggccgccg cgacctcccc tgcactggcc ccctggatct cccactctga cgacgcgcgc
     2161 gcccttcccg gcgtgcgcgc ggtgttcctg ctggcacccg cgatcgtgca ggcgttcgcg
     2221 cccgggcagc tgtcctcgtt gcagctgccg gtgtcgatcg tgctgggtga tgctgacaag
     2281 gttgcccctc cgacgagcaa tggcgaagcc gcacaggcat tgattccggg tgcgacgttg
     2341 ctgcgcctgg cagatgtcgg ccactacgat ttcctgtcca cctgtaccgc tgccggcgtg
     2401 cagcggctac cggacctgtg caccgctgcg acgtcaacgg cgggaaccca ccggcggacg
     2461 gtggatgcag cgacggggtt cttcgacgct gcgctgcgtg agccgcacga taacgaaccg
     2521 ttgcatctac ggtgacacgt gcgcaatccc cgcaggatta aactcggcgc atgcgctcca
     2581 tggaggatcg atcatgcgcc tgctccacct gaccctgccg gtgtccgacg tggccaccgt
     2641 cgccgcgtac ttccacgacg tgctgcagca gcgcgtggtc ggcaaccacg tgcacgtcgg
     2701 ctggagcacg atcgaactgc agcccgccgc tgatcatccg gtcggcggcg tgcacctggc
     2761 cttcaacgtg cccgacaacc gcttcggcga ggcgatggcc tggctgcgcg agcgcaccgc
     2821 cttgcaacgc aatccagccg gactggacta cttcgcgctg gaaagcagct ggcaatcgca
     2881 gtcggtgtac ttcaccggtc ccgatggcct gatcctggaa ctgatcggac gccgccgcct
     2941 gccgggcagc acgcgccaag gcgctttcca cggcggcgag ctgacctgcc tcagcgaagt
     3001 cggcctgccc agccacgatg tcgacagcgt gcgcgagcag gccagccagc gcttcggcct
     3061 gcagccgatc agcccgccgt cgccgcagtt cgcgccgatg ggcgacgacg agggcctgct
     3121 gatcgtggtg gcggccgatc gccgctggtt ccccgagcag aaggatctgc ccaacgcgca
     3181 gggcctgcag ctgcaggtcg gcgatgtagg cggcgcgggt gttgtggaag acgcttcgct
     3241 ggggtggcgc gtgcaggctg cctgaactac cagctgcccg acgcgccacc gccgccgctg
     3301 cgcccgccgc caccggacca atcgctggaa ctgctcgagg atgaacgtga cgacgcactg
     3361 ctggacgcgc tgcgagagcc accggatgag cgcaggccgc cgcgtgccct gtcagccggc
     3421 agcagggtga agatccacac gaagtacagc accagcgtgc ccgcactcca cccgatcgtc
     3481 gccgcaaggc gcgccgccgg ctcggcccga tcgatggcca gcagtgcgaa gagtgcgtag
     3541 ccggcgctca gcagcaacaa caccgtgaac cgtaccgcga agctgccgcg atccttgtgc
     3601 cagcgcgcgc ggccggcctg tacgatgaaa aacaccagca tcgcggcaat acccacggcc
     3661 aggtccagca acacgtgcag ggccaggctg ggcggcaact ggccccgcag cagcatcacc
     3721 ccgaagaaca ccccattggc cccgagcagg cccagcaata caacgcgcag gccccggctg
     3781 cggcgccagc accagccgag caggctcgcc acgggtacgc acagcgccag cacgaagcag
     3841 agcgccgcca ttgcctggcg gggtgcccac agcgccgccg ccagcacacc ggcggcgatc
     3901 accgcagtca ccagcaccgg gcggccccag gccggtaacc gcttcggtcg tgtctgcggc
     3961 gtggcggccg cacgcgatgt tccgcgccgg cgctggcgat gcctgcgcgc gaagtcgtcc
     4021 ggcgtccttg cctcgggccg cgagggcggc gaccgccaca gcccggcgag gaagccggcc
     4081 agcagcgaca gggcaaccac cgaatccgcg ctgcgccagt ccggcggcag cacgttgcgt
     4141 gccgacgggt cttcccagcc cggcaacgcc tcgccatcaa tcagcgcgac cacgaccttc
     4201 gttccatcca gcagcccctg gtcgaggtcg ccctcgcgga agcgcggcac gatcgccttg
     4261 tcgatgatgc gtgcggcata ggcatcggga atcgcacctt ccaggccata gccggtctgg
     4321 aggcgcacgc ggcggtcctg cacggccacc agcagcagca cgccatcatc gacaccggcg
     4381 cggcccagct gccattgctc gaacacccgc tgtgcatagg cttcgatgcc ctcgtcgcca
     4441 acctggtcga ccaccagcac ctgcaactgc gcgccggtac gcgcctgcag ctgtagcgcc
     4501 tgcgtgcgca gcgcgttgcg ggtgtccacc gacagcgcat gggcggtgtc caccaccgga
     4561 tcatccagcg ccggcaccgc cacggcggcc atcgccatca tcggcaacag gcacagcagc
     4621 aacagcccta ccgtggccca ggtccgcctg accgctcgca gcccgctcat gcgccctgcc
     4681 cctgctcgat ccgcgcatgc aatgcccgca gctgtgcggc caactggttg aacacctgca
     4741 gatcggcatc caccagggcc ggccaatccg gcgcctgccc cagcagctgt gccacctgct
     4801 cgttcggcgc gcgatcaaag ccttcgccca gcacggccag atagcgctga cggaaccgct
     4861 cagggtcgcg ctggtcctgc acgtagagct gcacggccaa cagccctgca tacaggtagt
     4921 tcaccagata gttcgggtcg tcatacatca ggcgcttgcc gatccagctg ttgcgcagct
     4981 gcggatagtg ctccggatcc tggccgaagc gcgccagcac ctggccggtc agcgcatcca
     5041 ggtcatcggc ggtacccagc gtgttgtcgg ccacgccccg gtagatcgac tgctccagct
     5101 gcgcctcctc ggacgaggtg aacagctgca gcaccatgtc gtccagcagc gacttcaggt
     5161 agtaggcctt ggcccgcggg tcctgcgcct gctggtacag ctggtcgcgg aagcgcagtt
     5221 cgttgtagat ggcgaacgcc tcggtcagcc atgggctgcc attgcgctgc agcggcgacg
     5281 catggccacg ctgcatccac tcgccatgca gcgcgtgacc ggcttcgtgc gcgatctcga
     5341 catcgctctc cagctcgccg ctgcgcacgc cgacgaacag cattgccggt gcgccaggtg
     5401 cgctcaccgg gaaggcatcc aggctgcggt caccgcgctc ggtggccagg tccatgcgcc
     5461 ggttggccgg atcgagcagc gcgcgcagct cgccaacata cgccgggccc aggtgctgca
     5521 tggcatcggc ggcggtgtcg cgcagctgcg gcagcgccag caccggcggg gtgtatccgg
     5581 catcgggcac cgtggtatcc cagagctgcg gcgcatcgat gcccgagcgc gcggcgtggc
     5641 gcagcagcat gttctggtag ccacgccgat cgccagcatg atgttcgatt gccagcaacg
     5701 tcgcatccac cgccgatgta tccaggccca tgcgctggta accacgcgcc ggggccgagc
     5761 catcgccctg caggcgtgcg gcggcatcgt tcacctgcac cagccccagc agtaccgagg
     5821 ccatcggctc ccggcgtgat tgaagacctt gccagtagcc cttccaaccg gcctcgcgca
     5881 gcgcgcggtc cggatgccgg gccagcgcct gcttgtcgtg cccgatatcc cagtgccgtc
     5941 catcgcgctc gatctgcggg tactcggcgc tgcgcaggat ctgcccacgc aggcgcgcga
     6001 agctgtccag cgccggatcc gccagggcgt ccaccgcctc atccagcgcg gcatcggccg
     6061 ggacggcggc ttccttcagt gcacgcgcgc gcaggaacgc atacggtgct gtccactcgg
     6121 cgtcaacggg cgcctcacgc agtgcagcgc gagcagttcg ggcgatgcgg ctgcacagcc
     6181 ccatcacctg gtccagcgcc tgtgccggtc ggtggtcgcg cgcgttgcgg gcggcctgca
     6241 ggtgcaggta ggcatgatgg cgcaggcact gtgcctgcat ggcctcggcc tgctggaaac
     6301 gttgcgcggg cgcaatgccg gccgcatgct gcagggcctc cagctgcttc tccagcgcat
     6361 cacgcgcgcg ctgctcggcc gccgcatcgg cgaagtaggc acgatcatcg gcctgcagcg
     6421 attccgcccg gataccggca agaggggcca tcgccagcat cacggcaacg gcggcggtag
     6481 tgcgcatcct gcgagcctgc atcggcgtct ccctgcctgg accaggcctt gagcctagca
     6541 gccgctgccg ccccgcgcct gtgccggatc aggcgtcctt cagatcgact cgtcctcgcg
     6601 cttgaccagc gtccagcacg gcgcctgcgc gaaggtgtag gtctgctggt cgctgctgtc
     6661 cggcgtgcgg atctgcacct ggcgctggcc atcggccagc gcactgacct gcatctcgcg
     6721 cccctgcccg gccagcgcgg cgggatcagg catcaccggc cattcgacgt cggccagtgc
     6781 cagccggctt tcgaccttgc gcggttccgg ctcggcctcg gcatcgatgt agctgtccag
     6841 caatgggtcg gcggtggcct tttcctgcag cgcgatctcg tggccgaagt gcttcaggaa
     6901 cgcatcgaac tgcggataag ggcattcagc actggccggc gccggcgcag gttgaaccgc
     6961 tgcggccgtg gatgtcggcg cgggggcggc cggtgcggtt tccgtgggcg ttggcggcgg
     7021 ctcgggcgtg caggcaacca gcgccacgcc acaggccagc gccagcactg cggcagaacg
     7081 gtatcgacgc atgggctcat cctgaatccg gttgggtcgc cccatgctac cgcgccccct
     7141 acaatcgctg cattctgcct gtccgagaat tccatgcatc gcttcctgct cctgatcggc
     7201 ctgctactac ccgccctgtg gccggccgtg gcaatggccg tcgatgtccg cgaaggcgac
     7261 ctgctgttcg tgactgccgg ccgcagcggc ctcagcgcgg ccatcgacga tgccaccggc
     7321 aagcagggcg cacccagctt cgatcacgtc gcgctggtcg cttccgcgcc gaaagggtgg
     7381 gaggtactgc acgccgacga gaagggctcg cgccggcagt cgctgtccgc gttccgccaa
     7441 gacgctcgtg ccaagcatcg gcagatcgtg gtctatcgcc tgcgtgcgcc gcagcaggcg
     7501 accatcaagg atgcggtcgc caccgcacgc accatgctcg gcaagccgta caacacgtca
     7561 tacgtgttga acgaggacag ctactactgc tcggacttca tcgaacgcgc cttccgcgcg
     7621 catcacgtgt tcgcgctgca gccgatgaac ttccgcaatc cgcagaccgg gcagatcgcc
     7681 cagcactggg tggacctgta ccacggcatg ggcatggagg ttccgcagga ccagcccggc
     7741 accaacccca acgacatgtc ggccgcgccg gtgctgcagc gtatcggcgt gctggaataa
     7801 gcgaagcccc gcacgaggcg gggcttcacc ggtcacgccg cgtaccgcgc gtggtcattc
     7861 ttcttcgtcg tggccgccct gctgctggtt gcgctctttg cgctgctgat cctgttgctg
     7921 ctgttgctgc tggtcacgac ggccctgctg ctgatcctgc tggttctgct ggcccggctg
     7981 cttctggttc gggttctggt tctgctgtgc catgtccgtt ctccgaaagc cacgcgcgaa
     8041 atgcggtgga cggggccatc gtctgcagcg attggttaat cacgcgtgcg tgggcggcta
     8101 catctgtgtg tacgcgcgtg aatgaacacg ccaagcccct tgcagcacaa gcccatgaag
     8161 gattcatgcg ggttcggcat gtgctcatgc ccgcgtcggg gcaacgcgca ttcatggctg
     8221 ccgcggccgg gaacgcgcgc tgaacgtggc ggctgtgccc tgctgcagga acacctgcac
     8281 tggattcaag gcatcaccgg cggcacatac gccagggtca tgcccagcag ccacagcagg
     8341 cccagcacca gcgggatgtg caccagcagc tggatgaagg tgaagccgac gatgtcgcgt
     8401 gctttcaggc cgagcacgcc cagcagcggc agcatccaga acggattgat caggttcggc
     8461 agcgcttcgg ccgcgttgta gacctgtacc gcccagccca ggtgcgcctt cagttcgttg
     8521 gcggcctgca tcacgtacgg cgcctcgatg atccacttgc caccaccgga cggcacgaag
     8581 aagccgagca ccgccgaata gacgcccatc accagcgcga aggtatcggt gctggccacg
     8641 tgcacgaaca ggctcgacaa ccggtgcgcc agcgtctgcc cgtcaccgcc ggcagcgtgg
     8701 gtcaggatca tggcgatgcc gccgtacagc gggaactgga tcagcacgcc ggtggtgctc
     8761 ggtaccgcct tggccaccgc gttgaggaag ctgcgcggcc gccagtgcag cagcaggccc
     8821 aacgagatga acaggaagtt gtaggtgttg aggttggcga tggcggtgac caccggcttg
     8881 ttggcgaact cgttgaacag ccagccgaac gccagcagcg agagcagcac ggtcagcagc
     8941 gggctgtact ccagccattc gcctgggcgc gtgcgtcgct gcagcggctc cggctcggcc
     9001 tgcgcagcac cggggaaatc ctcggcggtg cgggcgctgc cggcggccgg cgcggtcaac
     9061 caggcgatca gcagcgagac caggatcagc accgcggtca gcgcgatcga ctgccacagg
     9121 aagatggttt cggtgaacgg caatacgccg gtaatctcca ccagccccgg cggcatgctg
     9181 gccgggttgg cctgcagctg cgcggccgac gaactcaacc ccatcgccca caccgcaccc
     9241 aggccgagat aggccgacgc accggccgcg cggtagtcca tgcgcagctc ggtgcggcgc
     9301 gccagcgcac gtaccagcag gccgccgaac accagcgaga aaccccagct gagcagcgag
     9361 gccagcatgc tgaccaggcc cacgtacacc accgcgccac ggccggtgcg tggcacccgg
     9421 gcgaggaagt cgatgaagcg cgcgaccacc ggcgcagtgg ccacggcata gccaccgatg
     9481 accacgaagg ccatctgcat ggtgaaggga atcaggctcc agaagccgtc accgaaggcg
     9541 ctggcggtag cctgcggggt cgagccgaag cccatcgcgg ccagcgcaac gatgaccacg
     9601 cccagcaccg cgaacacata cgcatcgggg aaccactttt ccgcccaggc ggccgagcgc
     9661 aatgcagcgc gcgccatcca gccgtcctgt actgctgccg tcgaggccat cgcctaccct
     9721 cccaggttcg atggaccgat tctgggcggt ggggtgcggg ctgtcagcca cctattggtc
     9781 gtaggc
//
LOCUS       DAOKIP010000154         9756 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.154,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000154 DAOKIP010000000
VERSION     DAOKIP010000154.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 9756)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9756)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9756
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.154"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(112..1206)
                     /locus_tag="QEL58_002992"
     CDS             complement(112..1206)
                     /locus_tag="QEL58_002992"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014645715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide epimerase"
                     /protein_id="HDS1677437.1"
                     /translation="MKITAIELGMLRVPLKTPFKTALRTVETVEDVVVLIRTDTGHTG
                     YGEAPATAVITGDTHGSIIEAIRHFIAPRLIGQEVVNLNRLCGLVQSAMERNTSAKAA
                     VEIALYDLWAQLHGAPLYQMLGGGDPVITTDITISVDYIDKMVADSLSAIERGFESLK
                     IKVGKDIGLDIERVKAIHAAVEGRALLRLDANQGWTAKQAVHAMRTLEEAGVVLELLE
                     QPVKAADISGLKYVTDRVNTPVMADESVFSPSQVMDLIQQRAADIINIKLMKTGGLSN
                     AIRIADIAGIYGVPCMIGCMIESSISVAAAVHLAVAKSDVITKVDLDGPSLGQFDPVS
                     GGVHFNESEISISDVPGLGITEVRGLEMLG"
     gene            complement(1207..2643)
                     /locus_tag="QEL58_002993"
     CDS             complement(1207..2643)
                     /locus_tag="QEL58_002993"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005407818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SH3 domain-containing protein"
                     /protein_id="HDS1677438.1"
                     /translation="MILASRERHRHWPRRLTLALCLLAAPAFAQTTPAPDPGAPLPYV
                     IGLHEAFLTPQYWAARLDNADAPILDRAQIDAQNARMRAQDSHIQDIALLPAQLDATA
                     VRDSITALSSWPTRALYNDKGQPITPELRSAIEANLGLEAIPAQVAPQYGLVVKRAAL
                     RTFPTRERVFSSVGDTDIDRFQESALFPGNKVAVVHRSADGRWLFVHSERYSAWVEAD
                     AIASGDKATVLGYGAQGPYRIITGATAQTAYTPEEPRVSRLQLDMGVRLPVLADWPAA
                     EPVNGQQAHASWVVQLPVREADGRLKLVPALLPRSQDTAADYLPLTPRLLLQQAFKFL
                     GERYGWGHDYDTRDCSGFVSEIYRSFGVLLPRNTSAQAVSPALDRLPFTSKDGKAVRD
                     RAVTGLQVGDLVYIPGHVMMAIGHVDGRTWVIHDTAGGSWFGADGTRVQAHLNGVSVT
                     PLEPMMASDSVRYIDRITNIQRLRAKTP"
     gene            2776..4266
                     /locus_tag="QEL58_002994"
     CDS             2776..4266
                     /locus_tag="QEL58_002994"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005412044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase domain-containing protein"
                     /protein_id="HDS1677439.1"
                     /translation="MDPAVRKPRLTAAAGLGAALLLWAWSAGAEPPPSAIQFARVVQM
                     IDVGRFSQAHSELNTWSAADAAEPGVSFDDIAFQEERMRRIRLDFSLDETAAKAAVRR
                     WIPDLTDEEFARWDQLGLIEHLDIDGTRWYFKRAPSNLFLLSDEARARRRADAPMPAP
                     GPNEVLNAHHARVLAAAEQSGKASVLPQRIEFTQSLTVKADVVPAGETVRAWIPYPRE
                     IPGQQDQVQWLGSTPGKARVAPASTLQRTAYLEARAVAGQPTRFEVRYAVTIFARHTA
                     IDPAKVQPTPADPALQPYLSEQLPHVRFTPALKLFSDQVLQGETRPYEVVRKLFAAVD
                     RVPWAGAREYSTISNLSDYALRAGHADCGQQTLLLITLLRMNGIPARWQSGMVFSDDG
                     SGYNNLHDWGQVYLAPYGWLPMDVTTGALASDVPALRDFYLGGLDGYRIAFNDDFGQP
                     LVPAKQHFRSETVDSQRGEAEWAGGNLYFDQWSYDFQWRVLPARQR"
     gene            4318..7341
                     /locus_tag="QEL58_002995"
     CDS             4318..7341
                     /locus_tag="QEL58_002995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019336422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDS1677440.1"
                     /translation="MKAYNIKRAALCVALGACLGVVLPGIAMAQNVTGAVAGRATAGD
                     QVTVVSSSTGLTRTVNVGSDGSYRLGQLPVGDYQLQLSRDGQKLGDQVAVSVAVGGTT
                     TVNLASGGGVTNLDALQVVGTRVVNRVDVYSTETSFNINRQEISRLPVAQDLSAVALM
                     APGVVGGNSSFGGLSFAGSSVAENAVFINGLNVTDMYTRRGFSTAPFAFFNEFQVKTG
                     GYSVEFGRSTGGVINAVTRSGSNDFEGGVEVTAEPSAWRASGGDHFHRDGTPHSYGSR
                     DNNSFLKTNVWGSGPIIKDKLFLFAMYEDRSDKGHNTSSDGSTWFKNDSGNGFWGTKL
                     DWNINDNHSLALLAFSDEGDVTNASYGYNWNADRLGAWGGDSVTETGGRNWSATYTGH
                     FGQNFTARAMVGQNNQRAFTNSSLDQACSPVFTDSTYGPRLGKLQGLRAGCHPTGTAV
                     AERDDTRDVARLDFEWQLGDHLLRFGVDRELMTTKQSTRYPGPTELSYTAYVARPGDE
                     VWDGANAFVPAGVTEMLRARNRKSGGTFETEANAFYLEDIWNITPNLMLNLGVRWDRF
                     ENRTAAGKAFIKMDDLIAPRVGFSWDMRGDGSTKLFGNAGRYYLPVTNNINVNFAGGL
                     TDEYSYYVLNGWEQKTSPTGSPYMAPIIGQQIGPTDTRMNTGGADLRQSVDRDLKAVY
                     QDEYILGFQNMINQAWSWGVNATYRRMTRALDDIRINYTPCGPTPSTLWPIANPGESL
                     TIWGDKSIGCANEGWITIDTANSGYRKGGSGEVIGYSKPKRTYKALEFQIDRAWDEKW
                     MFNASYLWSKSEGNFEGPVNSDTNYGDTGMVQFWDHPATNERYGVLFNDFRHQFKLRA
                     AYALNKQWSFGTTLQVQSGGPITAYGVMWPNDSIAGGSTSSEGSGGGTGWLCVANCSG
                     PYNQRQFEYSPRGAFGRLPWTWTMGANVTWRLPVEGIDLSARLSVYNLFNNQKTINVH
                     QRYEAQPGQYRESTFATGTRWQAPRYTQLVVTWNF"
     gene            7380..8975
                     /locus_tag="QEL58_002996"
     CDS             7380..8975
                     /locus_tag="QEL58_002996"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HDS1677441.1"
                     /translation="MPYVRLRNLVEHARCGLCVAALAVSSAAATQPVDTASIDADVVA
                     IVRAEHLPGLAMAVVEQGRVVYRHAEGARGDGGRIDEDTLFKIASNSKAMTAALLARL
                     VQQGRLRWDDPVQRHLPEFRMHDAWVGQQMQVRDLLIHNSGLGLGAGDLMLWPEPNTF
                     TRADIIAGLAHLKPVSSFRSHYAYDNLMYVVAGEVAAAAGGKPYDQLMREHVFEPLGM
                     ARCQVGEWSVKRVGNVAQPHAWRGERNEVVNADGAISPDLPSMAAGGIRCSLRDMTRW
                     MQVLLDPALAPDWLGAEQRRTLWTLHMPMPLGERQRRWDNAHFYGYGYGWRVSDMDGQ
                     WKVAHTGTLSGMYSSLALLPDRKLGVVMLINGEGEDARTALMQATLKRFTAAHDARPA
                     MAYLAELKAEQATRAATGHQRPATSDARQASASDLPRWQGRYTDPWLGPASLCPGKDG
                     LRFSVDKSPKLQATVLQLQGRWLLRWDTLGDEAQAWLQPGEGPSPTLDLRAIDPDIDF
                     SYDFQDLHFTRTGDCAGRDRQRR"
     gene            8908..9621
                     /locus_tag="QEL58_002997"
     CDS             8908..9621
                     /locus_tag="QEL58_002997"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019336420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M15 family metallopeptidase"
                     /protein_id="HDS1677442.1"
                     /translation="MTSRTCISLVLATALAATASAAEPPRVSAATDAASAGLVEIRTL
                     SPHIDMDIRYAGANNFTGAPVPGYEAPSCYLLAPVAKALAQVEQDLRADGWGLRIYDC
                     YRPVRSVQAFMAWVNDPRELSRKALQYPDLDKPRLLADGYIAERSGHSRGATVDLGLL
                     DCRSGTCTPLDMGTDFDFFGPRAHTQTSGLSDVQQASRQLLVRAMARRGFVNYPQEWW
                     HYTLQPEPDPGTAYDVPVR"
BASE COUNT         1684 a         3191 c         3226 g         1655 t
ORIGIN      
        1 ccgcgaaggg gttacggggt agggcaaaaa caagagcaac gtcgtccacg cgcggcgtgg
       61 atctaccgtg gcacctgcct tgtagagtcg agccatgctc gactgcgagg atcaccccag
      121 catctccagc ccgcgcactt cggtgatgcc caaccccggc acgtcgctga tgctgatctc
      181 cgattcgttg aaatgcacgc caccgctgac cgggtcgaac tggcccagcg atgggccgtc
      241 cagatcgacc ttggtgatca catcgctctt ggccaccgcc aggtgcaccg ctgcggccac
      301 gctgatgctc gactcaatca tgcagccgat catgcacggc acaccgtaga tgccggcgat
      361 gtcggcgatg cggatcgcgt tggacaggcc gccggtcttc atcagcttga tgttgatgat
      421 gtcggccgca cgctgctgga tcaggtccat cacctggctc gggctgaaca cactttcgtc
      481 ggccatcacc ggcgtgttga cgcggtcggt gacgtacttc agtccgctga tgtcggcggc
      541 cttcaccggt tgctccagca gttccagtac cacgccggct tcttccagcg tacgcatcgc
      601 atgcaccgcc tgcttggcgg tccagccctg gttggcatcc agccgcaaca gtgcgcggcc
      661 ctcgacggcg gcatggatcg ccttgacccg ttcgatgtcc aggccgatgt ccttgccgac
      721 cttgatcttc agcgactcga agccgcgttc gatcgccgac agcgagtcgg ccaccatctt
      781 gtcgatgtaa tccacgctga tggtgatgtc ggtggtgatc accgggtcac cgccgccaag
      841 catctggtac aacggcgcgc catgcagctg cgcccacagg tcgtacagcg cgatttccac
      901 cgcggccttg gcgctggtgt tgcgctccat cgcgctctgc accagcccgc acaggcggtt
      961 gaggttgacc acctcctggc cgatcaggcg cggcgcgatg aagtggcgga tcgcttcgat
     1021 gatggaacca tgggtatcgc cggtgatcac tgccgtggcc ggcgcttcgc cataaccggt
     1081 gtggccggtg tcggtgcgga tcagcaccac cacgtcctcc acggtctcca ccgtgcgcag
     1141 ggcggtcttg aatggcgtct tcagcggcac gcgcagcatg cccagttcga tggcggtgat
     1201 cttcattcag ggagtcttgg ctcgcaggcg ctggatgttg gtgatgcggt cgatgtagcg
     1261 gacgctgtcg ctggccatca tcggctccag cggcgtgacc gaaacaccat tgagatgggc
     1321 ctgcacacgc gtgccgtcgg caccgaacca gctgccaccc gccgtatcgt ggatgaccca
     1381 ggtgcggccg tcgacgtggc cgatggccat catcacgtgg ccggggatgt agaccaggtc
     1441 gcccacctgc agaccggtga cggcgcggtc gcgcaccgcc ttgccgtcct tgctggtgaa
     1501 cggtaggcgg tccaacgccg ggctgaccgc ctgcgcgctg gtattgcgcg gcagcagcac
     1561 gccgaagctg cggtagatct cggacacgaa accgctgcaa tcgcgggtgt cgtagtcgtg
     1621 gccccagccg tagcgctcac cgaggaactt gaaggcctgc tgtagcagca ggcgcggggt
     1681 cagcggcagg tagtcggcgg cggtgtcctg cgagcgcggc agcagcgccg gtaccagctt
     1741 caatcgacca tcggcttcgc gtaccggcaa ctgcaccacc cacgacgcat gcgcctgctg
     1801 gccgttcacc ggctcggcgg ccggccagtc ggccagcacc ggcaggcgca cgcccatgtc
     1861 cagctgcagg cgcgacacgc gcggttcttc cggggtgtag gcggtctgcg cggtggcgcc
     1921 ggtgatgatg cggtagggtc cctgtgcgcc gtagccgagt accgtggcct tgtcaccact
     1981 ggcaatcgcg tcggcctcga cccacgcgct gtagcgctcg ctgtgcacga acagccagcg
     2041 gccatcggca ctgcgatgga ccacggcgac cttgttgccg gggaacagcg ccgattcctg
     2101 gaagcggtcg atgtcggtgt caccgacgct gctgaaaacg cgctcgcggg tggggaaggt
     2161 gcgcagcgct gcacgcttca ccaccagccc atactgcggc gctacctgcg cgggaatcgc
     2221 ctccagcccg aggttggctt cgatcgcgct gcgcaattcc ggtgtgatgg gctggccctt
     2281 gtcgttgtag agggcgcgcg tgggccagct cgacagtgcg gtgatgctgt cgcgcaccgc
     2341 ggttgcatcc agctgcgcgg gcagcaaagc gatgtcctgg atgtggctgt cctgcgcccg
     2401 catccgtgcg ttctgcgcgt cgatctgcgc gcggtcgagg atcggcgcat cggcgttgtc
     2461 caggcgtgcg gcccagtact gcggggtcag gaacgcctcg tgcaggccga tcacataggg
     2521 cagtggtgcg ccgggatcgg gtgccggagt ggtctgcgca aaggcgggcg cagccagcag
     2581 gcacagcgcc agggtcaagc ggcgcggcca atgccggtgc cgttcgcggg aagccaggat
     2641 catgcgctgc acaccctcct cgaatgcctg ttggaatatt tattcctttc ggcttcgaaa
     2701 tcaagaataa attattgacc ggcatcccgg cccgtgttac acagccgtta ccacccgcgc
     2761 tggggaagtg tcgctgtgga tcctgccgtt cgcaaaccgc gtctgactgc tgctgccggc
     2821 ctgggtgccg cgctgctgct gtgggcgtgg tcggcgggcg cggagccgcc gccctcggcc
     2881 atccagtttg cgcgggtcgt gcagatgatc gacgtgggac ggttctccca agcccatagc
     2941 gagctgaata cctggtcggc ggccgacgcg gcggaaccgg gcgtcagttt cgatgacatc
     3001 gcgttccagg aagaacgcat gcggcgcatc cgcctggatt tttctcttga cgaaaccgcc
     3061 gccaaggccg ccgtgcggcg ctggattccc gacctgaccg acgaggaatt cgcgcgctgg
     3121 gatcagcttg gcctgatcga gcacctcgat atcgatggca cgcgttggta cttcaagcgc
     3181 gcaccgtcga acctgttcct gctcagcgat gaagcacgtg cacgccgccg tgcggatgca
     3241 ccgatgccgg caccgggccc gaacgaagtg ctcaacgccc accacgcgcg cgtgcttgcc
     3301 gcggccgaac agagcggcaa ggcctcggtg ctgccgcagc gcattgaatt cacccagtcg
     3361 ctgacggtga aagccgatgt tgtgccggcc ggcgaaaccg tacgcgcatg gattccctat
     3421 ccgcgcgaga ttcccggcca gcaggatcag gtgcagtggc tgggcagtac gccgggcaag
     3481 gcacgcgtgg caccggcaag cacgctgcag cgcaccgcct acctggaagc cagggcggtg
     3541 gccggccagc caacccgctt cgaggtccgc tacgcggtca cgatcttcgc ccggcatacc
     3601 gcgattgatc cggccaaggt gcagccgacg ccggccgatc cggcgctgca accctacctg
     3661 tccgagcagc tgccacatgt gcgcttcact cccgcactga agctgttctc cgaccaggtg
     3721 ctgcagggtg agacgcggcc gtatgaagtg gtgcgcaagc tgttcgctgc ggtggatcgc
     3781 gttccgtggg ccggtgcgcg cgaatattcc acgatcagca atctcagcga ttacgcgttg
     3841 cgtgccggcc atgccgactg cggtcagcag acgctgctgt tgatcacgct gctgcgcatg
     3901 aacggcattc ccgcgcgctg gcagtcgggc atggtgttct ccgacgatgg cagcggctac
     3961 aacaacctgc acgactgggg gcaggtctac ctggcgccct atggctggct gccgatggac
     4021 gtgaccaccg gcgcactggc cagcgacgtg ccggccctgc gcgacttcta cctgggtggc
     4081 ctggacggct accgcatcgc cttcaacgat gatttcggcc agcccttggt gccggccaaa
     4141 cagcacttcc gctcggaaac ggtcgactcg cagcgcggcg aggccgagtg ggcaggcggc
     4201 aacctgtact tcgaccaatg gagctacgac ttccagtggc gggtactgcc agccaggcaa
     4261 cgctagcgcg acacatcaca ctccacacca ttcaattctt gcaggagaga gcaggggatg
     4321 aaggcttaca atattaagcg ggcggcgttg tgcgtcgccc tcggggcgtg tctgggcgta
     4381 gtgctgcccg gcatcgcgat ggcacagaat gtgacgggtg cagtcgccgg acgcgcgacc
     4441 gctggtgacc aggtcaccgt ggtcagcagc agcaccggcc tgacccgcac cgtcaacgtc
     4501 ggtagcgacg gcagctaccg cctgggccag ttgccggtgg gtgactacca gttgcagctc
     4561 agccgcgacg gccagaagct gggcgatcag gttgccgtca gcgttgctgt cggcggtacc
     4621 accacggtca atctggccag tggtggtggc gtgaccaatc ttgatgcatt gcaggtggtc
     4681 ggcacccgcg tggtcaatcg cgtggatgtc tactccactg aaacctcctt caacatcaac
     4741 cggcaggaaa tctcgcggct gccggtggct caggatctgt cggccgttgc gctgatggcg
     4801 ccaggcgtgg tgggcggcaa ctcgtcgttc ggtggcctgt cgttcgccgg ttcatcggtg
     4861 gccgagaatg cggtcttcat caacggcctg aacgtcactg acatgtatac ccgtcgtggc
     4921 ttcagcacgg cgccattcgc gttcttcaac gagttccagg tcaagaccgg tggctactcg
     4981 gtcgagttcg gccgctccac cggcggcgtg atcaatgccg tgacccgctc gggcagcaat
     5041 gacttcgaag gcggcgtgga agtcaccgcc gagcccagcg catggcgtgc cagcggcggg
     5101 gatcatttcc accgcgatgg cactccccac tcctatggca gccgtgacaa caactcgttc
     5161 ctgaagacca acgtctgggg ttcggggccg atcatcaagg acaagctgtt cctgttcgcg
     5221 atgtacgaag accgcagcga caaggggcac aacacctcgt ccgatggcag cacctggttc
     5281 aagaacgact cgggcaacgg cttctggggc accaagctgg actggaacat caacgacaac
     5341 catagcctgg cgctgctggc gttctccgac gaaggagacg tcaccaatgc gtcgtatggc
     5401 tacaactgga acgccgaccg gctcggcgcc tggggcggcg actcggtcac cgagaccggc
     5461 ggccgcaact ggtcggccac ctacaccggc cacttcggcc agaacttcac cgcacgcgcc
     5521 atggtgggcc agaacaacca gcgcgcgttc accaactcgt cgctggacca ggcctgcagt
     5581 ccggtgttca ccgatagcac ctacggcccg cgcctgggca agctgcaggg gctgcgcgcc
     5641 ggctgccatc ccaccggcac ggcggtggcc gaacgcgatg acacccgtga cgtggcgcgc
     5701 ctggacttcg aatggcagct gggcgaccac ctgttgcgct tcggcgtgga ccgcgagttg
     5761 atgaccacca agcagtccac ccgctacccg ggccccaccg agctgagcta taccgcttac
     5821 gtggcgcgac ccggcgacga agtgtgggac ggcgccaacg ccttcgtgcc ggcgggggtc
     5881 accgaaatgc tgcgcgcgcg caaccgcaag tccggtggca ccttcgagac cgaggccaat
     5941 gccttctacc tggaagacat ctggaacatc acgccgaatc tgatgctgaa cctcggcgtg
     6001 cgctgggacc gctttgaaaa ccgcaccgct gccggcaagg cgttcatcaa gatggacgac
     6061 ctgatcgcac cgcgcgtcgg cttctcctgg gacatgcgcg gcgatggcag caccaagctg
     6121 ttcggcaacg ccggtcgcta ctacctgcca gtcaccaaca acatcaacgt gaacttcgcc
     6181 ggtggcctga ccgacgagta cagttactac gtgctcaacg gctgggagca gaagacctcg
     6241 ccaaccggct cgccgtacat ggcgccgatc atcggccagc agatcgggcc gacagacacg
     6301 cgcatgaaca ccggcggtgc cgacctgcgc cagagcgtgg accgcgacct gaaggcggtc
     6361 taccaggacg agtacatcct gggcttccag aacatgatca accaggcctg gtcgtggggc
     6421 gtcaacgcca cctatcggcg catgacccgt gcgctggatg acatccgcat caactacacg
     6481 ccgtgcggcc cgaccccgag cacgctgtgg ccgatcgcca acccgggcga gagcctgacg
     6541 atctggggcg acaagagcat cggctgcgcc aacgaaggct ggatcaccat cgataccgcc
     6601 aacagcggct atcgcaaggg cggcagcggc gaggtgatcg gttactccaa gcccaagcgc
     6661 acctacaagg cactggaatt ccagattgat cgcgcgtggg acgagaagtg gatgttcaac
     6721 gcgtcctacc tgtggtccaa gagcgagggc aacttcgaag ggccggtgaa ctccgacacc
     6781 aactacggtg ataccggcat ggtgcagttc tgggatcatc cggccaccaa cgagcgctat
     6841 ggcgtgctgt tcaacgactt ccgccaccag ttcaagctcc gcgctgcgta tgcgctgaac
     6901 aagcagtggt cgttcggcac caccctgcag gtgcagtccg gtggcccgat caccgcctac
     6961 ggcgtgatgt ggccgaacga ctccatcgcc ggcggcagca cctccagcga aggcagcggc
     7021 ggcggcaccg gctggctgtg cgtggctaat tgttcgggcc cctacaacca gcgtcagttc
     7081 gagtacagcc cgcgcggcgc gtttggtcgc ctgccgtgga cctggaccat gggcgccaac
     7141 gtgacctggc gcctgccggt ggaaggtatc gacctcagcg cccggttgtc ggtgtacaac
     7201 ctgttcaaca accagaagac catcaacgtg caccagcgct acgaagcaca gcccggccag
     7261 taccgcgagt cgaccttcgc taccggcaca cgctggcagg cgccgcgcta tacccagctg
     7321 gtggtgacct ggaacttctg aagccagcgc cgcgtatagc gtcgagcgtg ctcggcagga
     7381 tgccgtacgt ccgtctgagg aacctggttg agcacgcccg atgcggcctc tgtgtggctg
     7441 cactggcggt gtcttcggct gcggcaacgc agccggtaga caccgcatcc atcgatgccg
     7501 acgtcgtcgc gatagtccgc gccgaacatc tgcccgggct ggccatggcg gtggtcgagc
     7561 aggggcgggt ggtctaccgg cacgccgaag gcgcgcgcgg cgacggtggt cgcatcgacg
     7621 aggacacgct gttcaagatc gcctccaaca gcaaggcgat gaccgccgcg ctgctggcgc
     7681 ggctggtgca gcagggcagg ctgcgctggg atgaccctgt gcagcgccat ctgccggagt
     7741 tccgcatgca tgacgcatgg gtgggccagc agatgcaggt gcgcgacctg ctgatccaca
     7801 acagcggcct cggcctgggt gcgggcgacc tgatgctgtg gccggagccg aacacgttta
     7861 cccgtgccga catcatcgcg gggctggcgc acctgaagcc ggtcagcagc ttccgcagcc
     7921 attatgccta cgacaacctg atgtacgtgg tggccggcga agtggccgct gcggccggtg
     7981 gaaaaccgta tgaccagctg atgcgcgaac acgtattcga acccttgggc atggcacgct
     8041 gccaagtggg ggagtggtcg gtgaaacgcg tgggcaacgt ggcgcagccg catgcctggc
     8101 gcggcgaacg caacgaagtg gtgaacgccg atggggccat cagcccggac ctgccctcga
     8161 tggccgccgg tggcatccgc tgctcgctgc gtgacatgac gcgctggatg caggtgctgc
     8221 tggaccccgc gctggcgccg gactggctgg gcgctgagca gcgccgcacg ctgtggaccc
     8281 tgcacatgcc gatgccgctg ggcgaacggc agcggcgctg ggacaacgcg cacttctacg
     8341 gctacggata cggctggcgg gtgtcggaca tggacgggca gtggaaggtg gcgcacaccg
     8401 gcacgctgtc gggcatgtat tcgtcgctgg ccctgctgcc cgaccgcaag ctgggtgtgg
     8461 tgatgctgat caacggcgag ggcgaggatg cgcgcacggc cctgatgcag gccacgctga
     8521 aacggttcac cgccgcgcac gatgcgcgcc cggcgatggc ctacctggcc gagctgaagg
     8581 ctgagcaggc cacgagggcg gcaaccggcc atcagcgacc agccacttcc gatgcgcgac
     8641 aggcgtcggc ttccgatctg ccacgctggc agggccgcta caccgacccg tggctgggtc
     8701 cggcctcgct gtgcccgggc aaggacggtc tgcgtttcag cgtggacaag tcccccaagc
     8761 tgcaggccac ggtactgcag ctgcaggggc gctggctgct gcgctgggat acgctgggcg
     8821 acgaagcgca ggcgtggctg cagccgggcg aaggcccgtc gccgacgctg gacctgcgcg
     8881 ccatcgatcc ggacatcgac ttcagctatg acttccagga cctgcatttc actcgtactg
     8941 gcgactgcgc tggccgcgac cgccagcgcc gctgagccac cgcgcgtttc agcggccacc
     9001 gatgcagcca gcgccggact ggtggagatc cgcacgctgt cgccacacat cgacatggat
     9061 atccgctacg ccggcgccaa caacttcacc ggcgcgccgg tacccggcta cgaggcgcct
     9121 tcctgctatc tgctggcacc agtggcgaag gcactggccc aggtggagca ggatctgcgc
     9181 gcagacggat ggggcctgcg gatctacgac tgctatcgac cagtgcgctc ggtgcaggcc
     9241 ttcatggcct gggtgaacga cccgcgcgag ctttcgcgca aggcattgca gtacccggac
     9301 ctggacaagc cgcgcctgct ggccgacggc tacatcgccg agcgttccgg ccacagccgc
     9361 ggtgccaccg tcgacctcgg cctgctggat tgccgcagcg gcacctgcac gccgctggac
     9421 atggggaccg acttcgattt cttcggcccg cgtgcgcata cgcagacgag tggattgagc
     9481 gacgtgcagc aggcgagtcg acagctgctg gtgcgcgcga tggcccggcg cggtttcgtg
     9541 aattatccgc aggagtggtg gcactacacg ctgcagcccg aaccggaccc gggcaccgcg
     9601 tacgacgtcc cggtgcggta ggggcatcgg cagagggtcg ctgctgttgg taggtgtcga
     9661 ccttggtcga cacggtagat ccacgtcatg cctggatgct tttcgtttga tcatcgagat
     9721 actcgatttc gatgaagatt catccacgca tggcgt
//
LOCUS       DAOKIP010000155         9732 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.155,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000155 DAOKIP010000000
VERSION     DAOKIP010000155.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 9732)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9732)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9732
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.155"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(8..1204)
                     /gene="hemW"
                     /locus_tag="QEL58_002998"
     CDS             complement(8..1204)
                     /gene="hemW"
                     /locus_tag="QEL58_002998"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017156861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM family heme chaperone HemW"
                     /protein_id="HDS1677443.1"
                     /translation="MPGETCPGDHDTPPRLVPPPLSLYVHLPWCVRKCPYCDFNSHQA
                     KGELPFDAYIDALLRDLDQDLPLVWGRVVHSVFFGGGTPSLFPPEAIDRFLQQASARL
                     RFAPNAEITLETNPGTAEHGRFDRYRAAGVNRLSFGIQSFDDAMLKRLGRIHDSGEAE
                     RAVKMAQDAGYDNFNIDLMYALPEQTLAGAGADLERAFALQPAHISHYQLTLEPNTVF
                     FARPPQGIPDEDNAWDMQEHCQALLAQAGFGQYEVSAYARPGRQSAHNLNYWRFGDYL
                     GIGAGAHGKISSGAEEHVLRRWKLKHPQAYLDSAGTPASFGGDDVIAPGRLPFEYMLN
                     LLRLHEGFSLRDFESRTGLPRSVLDAPLADAVQRGWLHMADGHVQPTELGRRFTNDVV
                     SLFLED"
     gene            complement(1292..1888)
                     /gene="rdgB"
                     /locus_tag="QEL58_002999"
     CDS             complement(1292..1888)
                     /gene="rdgB"
                     /locus_tag="QEL58_002999"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RdgB/HAM1 family non-canonical purine NTP
                     pyrophosphatase"
                     /protein_id="HDS1677444.1"
                     /translation="MKKLVLASHNAGKLVEMQEILADLPLQITSAAELGLGDVEETGL
                     TFVENALLKARAACEATGLPALADDSGLIVDALGGAPGLYSARYAGQPTNAAANNAKL
                     LDAMAEVPDGQRSARFYAVIVLLRHATDPQPLICEGRWEGQITREPRGSNGFGYNPVF
                     LDTTHGLTAAEMETPLKNAISHRALALQQLKQQLATLY"
     gene            complement(1885..2274)
                     /locus_tag="QEL58_003000"
     CDS             complement(1885..2274)
                     /locus_tag="QEL58_003000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017156863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HDS1677445.1"
                     /translation="MNRRLALTTLVVADYDEAIAWYTGKLGFSLLEDIDQGSKRWVVV
                     GPTDGSAAALLLARASNEEQRSRIGNQTGGRVAFFLNTDDFHRDHAAMLAAGVEFLEA
                     PREEAYATVAVFRDLYGNTWDLLEPRQ"
     gene            complement(2271..2996)
                     /gene="rph"
                     /locus_tag="QEL58_003001"
     CDS             complement(2271..2996)
                     /gene="rph"
                     /locus_tag="QEL58_003001"
                     /EC_number="2.7.7.56"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease PH"
                     /protein_id="HDS1677446.1"
                     /translation="MSDSRPSGRQPDQLRPVVIQRGFTRHAEGSVLVCFGETRVLCTA
                     SVENRVPGFLRGKGEGWVTAEYGMLPRATHTRSDREAARGKQGGRTLEIQRLIGRSLR
                     ACVDRNALGERTITLDCDVLQADGGTRTAAITGAYVALVDAVNVLMKRGDIKRNPILG
                     AVAAVSVGVYRGTPVLDLDYAEDSDCDTDMNVVMNDGGGFIELQGTAEGHAFRRDELD
                     ALLGLAEKGVRELLAAQQAALSA"
     gene            3121..3981
                     /locus_tag="QEL58_003002"
     CDS             3121..3981
                     /locus_tag="QEL58_003002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005996763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YicC family protein"
                     /protein_id="HDS1677447.1"
                     /translation="MIRSMTAYAGGERVTPWGTLGCELRSVNHRFLEVGTRLPEELRA
                     LEPQLRERIAARLSRGKLDLVMRLRAPEAAGSLQVNEVLLGQLGQLAHRLTSDFPNLQ
                     VSFTELLQLPGVTQGEATDAAALQAEALSLLDQVLDGFVAAREREGDKLSTAIAERVD
                     GIERIAAEVRSLIPAIRDGQRAKLAARLADLPHPVDPGRAEQELVLWLQKLDVDEELD
                     RLGSHIVEIRRVLKQREPVGRRLDFLLQEFNREANTLGSKSVDSRTSNAAVELKVLID
                     QIREQVQNIE"
     gene            complement(4024..5103)
                     /gene="selD"
                     /locus_tag="QEL58_003003"
     CDS             complement(4024..5103)
                     /gene="selD"
                     /locus_tag="QEL58_003003"
                     /EC_number="2.7.9.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006389649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="selenide, water dikinase SelD"
                     /protein_id="HDS1677448.1"
                     /translation="MATHAQSPAPSPADAPQRLTSLAHGGGCGCKIAPGVLSELLRGV
                     PALPAPAELLVGRETSDDAAVYRLDDRQAIVATTDFFMPIVDDPFDFGRIAATNALSD
                     LYAMGARPLFALAIVGMPINVLPQDTIRGILQGGERACADAGIVVAGGHSIDSVEPIY
                     GLAAIGVLDPQRLKRNADARVGDVLVLGKPLGVGVYSSALKKELLDADGYRQMVQSTT
                     RLNSVGVPLAALDGVHAMTDVTGFGLLGHLLEVCRASGVAAEVDSTQVPLLPQALDLL
                     QRGCVTGASSRNWASYGAEVRFAAGMAAHWQPLLTDPQTSGGLLVSCAPEAVDAVLAC
                     FHDAGFAQAAVVGRLNAGAPGISVV"
     gene            complement(5130..5225)
                     /locus_tag="QEL58_003004"
     tRNA            complement(5130..5225)
                     /locus_tag="QEL58_003004"
                     /product="tRNA-Sec"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(5189..5191),aa:Sec,seq:tca)
     gene            complement(5250..7181)
                     /gene="selB"
                     /locus_tag="QEL58_003005"
     CDS             complement(5250..7181)
                     /gene="selB"
                     /locus_tag="QEL58_003005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008267379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="selenocysteine-specific translation elongation
                     factor"
                     /protein_id="HDS1677449.1"
                     /translation="MIVGTAGHIDHGKTSLVRALTGIETDRLQEERTRGISIELGYAY
                     VPLEGTDAQGPAATLGFVDVPGHERFVHTMVAGATGIDVALLVVAADDGVMPQTREHL
                     AILQLLGVDRGVVALTKIDRVDAARIARVEIGVAALLAGTPLQDAPVFACNSTAPGDA
                     GIDALRAHLHAWAAGDANARQDALRRELFRMPVDRVFSLAGHGTLVTGAVHGGIAAAG
                     EHLQLMPAATDVRVRSIHAQNQASEHAMAGQRCALNLAAIARDDINRGDWIADPRAMR
                     ATTRVDVRLRLSALAPPLRDRAPLHIHWGTMRRQAHAVLLEDHDHGNGQLVQLVFDVP
                     VCAMCGDRFIARDSAATHTLGGGIVLDPEPPQRRRRSPARLAWLAALEQLAAGAGPGP
                     LLQQAPAGIPATALQRYCRRAADRIDLPADARRINTRDDTVIILARHWQALGEQVITS
                     LRGWHERRPDEPGVDSGRLQRSTLPALATGLWNALLQDLLDHGSVQRVGAWWRLPGHD
                     HAPPERERQLLERVLPQLHAGGFDPPWVRTLADGLGLAEDDVRAILRRAAARGELFQV
                     VPDLFYAPARIAELAAIVAQLSQATGTVDAAAFRDAIGLGRKRSIQILEFFNRVGYTR
                     RVGDQHRPRGDLQWNAPHG"
     gene            complement(7178..8602)
                     /locus_tag="QEL58_003006"
     CDS             complement(7178..8602)
                     /locus_tag="QEL58_003006"
                     /EC_number="2.9.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006389645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-seryl-tRNA(Sec) selenium transferase"
                     /protein_id="HDS1677450.1"
                     /translation="MTATPHAPASAAALPSLDRLLRLPALGALIEGHGRSRITQLLRV
                     HLQALRERISAAQLSAEQLHQAIEGPALVAALDAALTADARLDLQPMFNLTGTVLHTN
                     LGRALLPETAVHAVTRAMTVPIDLEFDISRGRRGDRDARVQALVCELTGAEAATVVNN
                     NAAAVLLLLNSLANRREVVVSRGELVEIGGAFRIPDVMRSAGARLLEVGTTNRTHPAD
                     FTHAIGARTALLMEVHASNYAITGFTAKVDTAAMAAIAHQHGLPLAVDLGSGSLCDLA
                     TFGLPHEPTVQDALAAGADLVSFSGDKLLGGPQAGIIAGRADLIARINRNPLKRALRM
                     DKMGLAALEAVLALYREPEYLAQRLPTLRTLTRTQQDIDAQAQRLLPAMRSALATDCT
                     LERASMHSQIGSGAQPQAQLASAGLRITSARRGGLDRLAARLRQLPRPILGRIADDAL
                     WLDLRCLEPADEADFLAQWSTLQA"
     gene            complement(8607..9590)
                     /gene="fdhE"
                     /locus_tag="QEL58_003007"
     CDS             complement(8607..9590)
                     /gene="fdhE"
                     /locus_tag="QEL58_003007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase accessory protein FdhE"
                     /protein_id="HDS1677451.1"
                     /translation="MAQRILEPGEIETLASRDVPRIILPDTASLFAGRAARLRSLAAH
                     SAIGGYLQLLAALADAQQSLLDELTPQQRETLQAQARSQQSSAAAGAGMPLRPANTLQ
                     LDGHWRDWLRTLCRHCADEAGLPAETRQELQRVAAADDAWLDAQAHAVLERDDAPSLD
                     AVAALLVMNALQVYWAVLADSFRPTDLKPLADAPGLCPLCGTLPVASVVQARPPYASY
                     RYLSCSLCACQWHYVRVQCSQCGAAGKDIAYRALADVDGDSGEAVRESAVRAETCDHC
                     HSYRKILYLEKDPALEPVADDLGTLSLDLLLGEEGYARASQNPLLWQSDGD"
BASE COUNT         1481 a         3270 c         3442 g         1539 t
ORIGIN      
        1 gcgagcatca atcttccagg aacaggctca ccacatcgtt ggtgaagcgg cggcccagct
       61 cggttggctg cacgtggccg tccgccatgt gcagccagcc gcgctgcacg gcgtcggcca
      121 gcggtgcgtc cagcacgctg cgcggcaggc cggtgcgcga ctcgaaatcg cgcaggctga
      181 aaccttcatg caggcgcagc aggttcagca tgtactcgaa cggcagccgc ccgggggcga
      241 tgacatcgtc gccgccgaac gaggcggggg tgcccgcgct gtcgaggtag gcctgcggat
      301 gtttcagttt ccagcgtcgc agtacgtgct cctcggcacc ggaactgatc ttgccgtgcg
      361 cgccggcgcc gatgcccagg tagtcgccga agcgccagta gttcaggttg tgcgcactct
      421 gccggccagg gcgcgcatag gcgctgacct cgtactggcc aaagccggcc tgtgccagca
      481 gggcctggca gtgttcctgc atgtcccagg cgttgtcctc atcgggaatg ccctgcggcg
      541 gccgtgcgaa gaacaccgtg ttcggttcca gggtcagctg gtagtgcgag atgtgcgccg
      601 gctgcagtgc gaaggcgcgt tcaagatcgg ccccggcgcc ggccagggtc tgttccggca
      661 gcgcgtacat caggtcgatg ttgaaattgt cgtagcccgc gtcctgcgcc atcttcaccg
      721 cgcgctcggc ctcgccactg tcgtggatgc ggcccaggcg cttgagcatc gcgtcgtcaa
      781 aactctggat gccgaagctg aggcgattca cgccggccgc gcgatagcgg tcgaaacggc
      841 cgtgttcggc ggtgcccggg ttggtttcca gggtgatctc ggcattgggc gcgaagcgca
      901 ggcgcgcgct ggcctgctgc aggaagcggt cgatcgcttc cggcgggaac aggctgggcg
      961 tgccgccacc gaagaacacg ctgtgcacca cccgtcccca gaccagcggc aggtcctggt
     1021 ccaggtcgcg cagcagcgcg tcgatgtagg catcgaacgg cagctcgccc ttggcctggt
     1081 gcgagttgaa gtcgcagtag gggcatttgc gcacgcacca cggcaggtgc acgtacagcg
     1141 acaacggcgg cggcaccagg cgcggcggag tgtcgtggtc gcccgggcag gtttcgccgg
     1201 gcaggtggtt gcagtggtcg tgggcgtgcg gcatgggctt catcggtagt gccggccact
     1261 ggccgacttc ccttgggtaa tcaggaacgc atcaatacag cgtggccagc tgctgcttga
     1321 gctgctgcag ggcgagggcg cggtggctga tggcgttctt caggggcgtt tccatctccg
     1381 cggcggtcag gccgtgggtg gtatccagga acaccgggtt gtagccgaag ccgttgctgc
     1441 cgcgcggttc gcgggtgatc tgtccttccc agcggccctc gcagatcagt ggctgcgggt
     1501 cggtggcatg gcgcagcagg acgatcaccg catagaagcg ggcgctgcgc tggccgtcgg
     1561 gcacttcggc catcgcgtcc agcagcttgg cgttgttggc cgcggcattg gtcggctggc
     1621 cggcatagcg cgcgctgtac aggcccggtg caccgccgag ggcatcgacg atcaggcccg
     1681 aatcatcggc cagcgccggc aggccggtcg cttcgcaggc cgcgcgcgcc ttcagcagcg
     1741 cgttctcgac gaaggtcagg ccggtctctt ccacgtcgcc caggcccagc tcggcggccg
     1801 aggtgatctg caacggcagg tcggcgagga tctcctgcat ctccacaagc ttgccggcgt
     1861 tgtggctggc cagtaccagt ttcttcattg gcggggctcc agcaggtccc aggtgttgcc
     1921 atacagatcg cggaacaccg cgaccgttgc ataggcttct tcgcgcggtg cttccaggaa
     1981 ttcgaccccg gcggccagca tcgccgcgtg gtcgcggtgg aagtcgtcgg tgttgaggaa
     2041 gaaggcgacc cggccaccgg tctggttgcc gatgcggctg cgctgttcct cgttgctggc
     2101 gcgggccagc agcagggcgg cggcgctgcc gtcggtcggt ccgaccacca cccagcgctt
     2161 gctgccctgg tcgatgtctt ccagcagcga gaagccgagc ttgccggtgt accaggcgat
     2221 ggcttcgtcg taatcagcca ccacgagggt ggtcagggca aggcgccggt tcatgccgac
     2281 agcgccgcct gctgcgcggc cagcagttcg cgcacgccct tctcggccag gcccagcagc
     2341 gcgtccagtt catcgcggcg gaaggcatgg ccttcggcgg tgccctgcag ttcgatgaaa
     2401 ccgccaccgt cattcatcac cacgttcatg tcggtgtcgc agtcgctgtc ttcggcgtag
     2461 tccaggtcca gcaccggggt gccgcggtac acgcccaccg acacggccgc gaccgcgccc
     2521 aggatcgggt tgcgcttgat gtcgccgcgc ttcatcagca cgttcactgc atcgaccagg
     2581 gccacgtagg cgccggtgat ggcggcggtg cgggtgccgc cgtcggcctg cagcacgtcg
     2641 cagtcgaggg tgatggtgcg ctcgcccagc gcgttgcggt ccacgcaggc acgcaggctg
     2701 cggccgatca ggcgctggat ctccagcgtg cggccgccct gcttgccacg cgccgcttcg
     2761 cggtcgctgc gggtgtgggt ggcgcgcggc agcatgccgt actcggcggt cacccagcct
     2821 tcgcccttgc cgcgcaggaa gcccgggacg cggttctcga cactggcggt gcacagcacg
     2881 cgggtttcac cgaagcacac cagcaccgaa ccttcggcat ggcgggtgaa gccgcgttgg
     2941 atgacgaccg gtcggagctg gtcgggctgg cggccgctgg ggcgggaatc ggacatggtg
     3001 caggttccgt aatggcgtgg gagtacgccg ccatgcccgc ggccttcacg gggcgggcaa
     3061 gggggctcag gtgagggcgc tagggtacca ttcccccttt gcacgcaccg gacacattcc
     3121 atgattcgaa gcatgaccgc ctatgccggc ggcgagcggg tcaccccgtg gggcacgctg
     3181 ggctgcgagc tgcgctcggt caaccaccgc ttcctggagg tcggcacccg cctgcccgag
     3241 gaactgcggg cgctggagcc gcagctgcgt gagcgcattg cggcgcgcct gagccgcggc
     3301 aagctggatc tggtgatgcg cctgcgcgcg ccggaagcgg cgggcagcct gcaggtcaac
     3361 gaggtgctgc tggggcagct gggccagctg gcccaccggc tgacctccga tttccccaat
     3421 ctgcaggtca gcttcacgga actgctgcag ctgcccggcg tgacccaggg cgaggcgacc
     3481 gacgcggcag cgttgcaggc cgaggcgctg tcgctgctgg accaggtgct ggacggtttc
     3541 gttgccgccc gtgagcgtga aggcgacaag ctgtccacgg cgattgccga gcgcgtggat
     3601 ggcatcgagc gcatcgccgc cgaagtgcgc agcttgattc cggccattcg cgacggccag
     3661 cgcgccaagc tggccgcacg cctggccgac ctgccgcacc cggtcgatcc cggccgcgcc
     3721 gagcaggaac tggtgctgtg gctgcagaag ctggacgtgg atgaggagct ggaccgcctg
     3781 ggcagccaca tcgtcgagat ccgtcgcgtg ctcaagcagc gcgagccggt cggtcgccgc
     3841 ctggacttcc tgctgcagga gttcaaccgc gaagccaaca cgctgggctc gaagtcggtg
     3901 gacagccgta cgtccaatgc cgcggtggaa ctgaaggtgc tgatcgacca gatccgcgag
     3961 caggtgcaga acatcgagtg agacggcagg ggcgccttcg ggcgcccttc ttcggtccgg
     4021 cattcagacc acgctgatgc ccggcgctcc cgcgttcagg cggcccacca cggctgcctg
     4081 ggcgaacccc gcatcgtgga aacaggccag caccgcatcc accgcttccg gcgcgcacga
     4141 caccagcagg ccaccactgg tctgcggatc ggtcagcagt ggctgccagt gcgccgccat
     4201 gcccgcggcg aagcgcacct cggcgccata cgaggcccag ttgcggctgg atgcgccggt
     4261 cacgcaaccc cgctgcagca ggtccagcgc ctgtggcagc agcggcacct gtgtgctgtc
     4321 cacctcggcg gcgacgccgc tggcgcggca cacttccagc agatggccga gcaggccgaa
     4381 gccggtgacg tcggtcatcg cgtgcacgcc gtccaatgcg gccagcggca cgccgacgct
     4441 gttcaggcgg gtggttgact ggaccatctg ccggtagccg tcggcatcga gcagttcctt
     4501 cttcagcgcc gacgaataca cgcccacacc caatggcttg cccagcacca gcacgtcgcc
     4561 gacgcgggca tcggcattgc gcttgagccg ctgtggatcg agcacgccga tcgcggccag
     4621 gccgtagatg ggctccaccg aatcgatgct gtggccaccg gcgaccacga tgccggcatc
     4681 ggcacaggcg cgttcgccac cctgcaggat gccgcggatg gtgtcctgcg gcagcacgtt
     4741 gatcggcatg ccgacgatgg ccagcgcgaa cagtggccgc gcgcccatcg catacaggtc
     4801 agacagcgcg ttggtcgcag cgatgcggcc gaaatcgaac gggtcgtcga cgatcggcat
     4861 gaagaaatcg gtggtggcga cgatcgcctg gcgatcatcg aggcgataca ccgccgcgtc
     4921 gtcgctggtc tcacgcccga ccagcagttc ggccggtgcg ggaagcgccg gaaccccacg
     4981 cagcagctcg gaaagcaccc ccggcgcgat cttgcagccg cagccgccac catgggccag
     5041 tgaggtcagg cgttgcgggg catcggcggg tgaaggggcg ggggactgcg cgtgcgtggc
     5101 catgccgaca tctcctgcgg aaacaccaat ggcggaaggc agcaggagtc gaacctacca
     5161 gggaacgatc gacgccccct gctgggtttg aagcccagcc gcatgcccgg atgcgcatgc
     5221 cttccgaaag tacggcgatg ccggggcgct caaccgtggg gggcgttcca ttgcagatcg
     5281 ccgcgcggcc gatgctggtc accgacgcgt cgagtgtagc caacgcgatt gaagaactcc
     5341 aagatctgga tgctgcgctt gcggcccagg ccgatggcat cgcggaaggc ggccgcatcc
     5401 acggtgcccg tggcctgtga cagctgcgcg acgatcgcag cgagttcggc gatgcgggcc
     5461 ggtgcataga acaggtccgg taccacctgg aacagttcac cgcgcgcagc ggcgcggcgc
     5521 aggatggcgc ggacgtcgtc ttcggcgagg ccaagcccgt cggccagggt acgcacccac
     5581 ggcggatcga aaccgcctgc gtgcagctgt ggcagcacgc gttcgagcag ctggcgttcg
     5641 cgttccggtg gtgcgtggtc gtggccgggc aggcgccacc aggcccccac gcgctgcacg
     5701 ctgccgtggt cgagcagatc ctgcagcagc gcgttccaca ggccggtcgc cagcgcagga
     5761 agggtgctcc gttgcaggcg tccgctgtcg acaccgggtt cgtctggtcg tcgctcgtgc
     5821 caaccccgca gcgaggtgat cacctgctcg ccaagcgcct gccagtgccg ggcgaggatg
     5881 atcaccgtgt catcccgggt gttgatgcgc cgcgcgtccg cgggcaggtc gatgcgatcg
     5941 gcggcacgtc ggcagtagcg ttgcagggcg gtagcgggaa tgccggcagg cgcctgttgc
     6001 agcagcgggc ccggcccggc gccggccgcc agttgctcca gcgccgccag ccacgcaagc
     6061 cgggccgggc tgcgccgtcg ccgttgcggg ggctccgggt caagcacgat gccgcctccc
     6121 aacgtgtggg tggccgccga gtcgcgggcg atgaagcggt cgccgcacat cgcgcagacc
     6181 ggtacatcga acaccagctg cacgagctgt ccgttgccgt ggtcatggtc ctccagcagc
     6241 accgcatggg cctgccggcg catcgtgccc cagtggatgt gcagtggcgc ccggtcgcgc
     6301 agcggcggcg ccagcgcgga aagccgcagg cgcacgtcga cgcgggtggt ggcccgcatc
     6361 gcacgcggat cggcaatcca gtcgccacgg ttgatgtcgt cgcgggcgat ggccgccagg
     6421 ttcagtgcgc agcgctgccc ggccatcgca tgctcgctgg cctggttctg cgcatggatg
     6481 ctgcgcacgc gcacgtcggt ggcagccggc atcagctgca ggtgctcgcc tgccgcggcg
     6541 atgccgccgt gcaccgcgcc ggtcaccagc gtgccgtgcc cggccagcga gaacacgcgg
     6601 tccaccggca tgcggaacag ttcacggcgc agcgcgtcct ggcgcgcgtt ggcatcgccc
     6661 gcggcccacg cgtgcaggtg cgcgcgcaac gcgtcgatgc ctgcatcccc gggcgcggtg
     6721 ctgttgcagg caaacacagg ggcatcctgc agtggcgtgc cggccagcag cgcggcgacc
     6781 ccgatctcga cccgggcgat gcgcgcggca tccacgcggt cgatcttggt cagtgccacc
     6841 acgccgcggt ccacgcccag cagttgcagt atcgccaggt gttcacgggt ctgcggcatc
     6901 accccatcgt cggcggcgac caccagcagg gcgacatcga tgccggtggc gccggccacc
     6961 atcgtgtgca cgaagcgctc atggcctggc acatccacga agcccagcgt tgcggcgggg
     7021 ccctgcgcgt cggtgccttc aaggggcacg tacgcgtaac ccagctcgat ggagatgccg
     7081 cgcgtgcgtt cttcctgcag gcggtcggtc tcgatgccgg tcagtgcgcg taccaggctt
     7141 gtcttgccat ggtcgatatg cccggcggtg ccgacgatca tgcctgcagc gtgctccatt
     7201 gggcgaggaa gtccgcttcg tcggcaggtt ccaggcaacg caggtccagc cacagcgcat
     7261 catcggcgat gcgacccagt atcggccgag gcagctggcg caggcgcgcg gccaggcgat
     7321 ccagaccgcc acgacgggct gatgtgatcc gtagcccggc gctggccagc tgcgcctgcg
     7381 gttgcgcgcc gctgccgatc tggctgtgca tcgatgcgcg ttcaagggtg cagtcggtcg
     7441 ccagcgcgga acgcatggcc ggcagcaggc gctgtgcctg tgcatcgatg tcctgctgcg
     7501 tgcgcgtcag cgttcgcagc gttggcaacc gttgcgccag gtactccggt tcgcggtaca
     7561 gggccagcac cgcttccagt gcggccaggc ccatcttgtc catgcgcagt gcccgcttga
     7621 gcgggttgcg gttgatccgc gcaatcaggt cggcgcggcc ggcgatgatg ccggcctgcg
     7681 gcccgcccag cagcttgtcg ccactgaatg aaaccagatc ggcaccggcg gcaagtgcgt
     7741 cctgcacggt cggctcgtgc ggcaggccga aggtggccag atcacacagg ctgccactgc
     7801 ccaggtccac tgccagcggc aacccatgct ggtgcgcgat ggcggccatc gccgcggtgt
     7861 ctaccttggc ggtgaaaccc gtgatcgcgt agttgctggc atgcacctcc atcagcaacg
     7921 cggtgcgggc gccgatggca tgggtgaaat cggccgggtg ggtgcggttg gtggtgccta
     7981 cttccagcag gcgcgccccg gcgctacgca tcacatcagg aatgcggaag gcgccgccaa
     8041 tctcgaccag ctcgccgcgt gagaccacca cctcgcggcg gttggccagg ctgttgagca
     8101 gcagcaggac cgccgctgca ttgttgttga ccacggtggc ggcttcggcg ccggtcagct
     8161 cgcagaccag cgcctgcacc cgtgcatcgc ggtcgccgcg gcggccgcgg ctgatgtcga
     8221 actccagatc gatcggcacg gtcatcgcac gggtgaccgc gtgcacggcg gtttcgggca
     8281 acagggcgcg gccgaggttg gtgtgcaaca cggtgccggt caggttgaac atcggctgca
     8341 ggtcgagccg cgcatcggcg gtgagtgcgg cgtcgagcgc cgcgaccagc gccgggcctt
     8401 caatggcctg gtgcaactgc tcggccgata gctgcgcggc actgatgcgc tcacgcagcg
     8461 cctgcagatg tacgcgcaac aactgggtga tgcggctgcg gccgtggccc tcgatcagtg
     8521 ctcccaaggc cggcaggcgc agcagccggt ccagcgaggg cagggcagcg gccgatgccg
     8581 gggcatgggg cgtggctgtc atcgcctcaa tcgccgtcgg attgccacag cagcggattc
     8641 tggctggcac gtgcgtagcc ttcctcgccc agcagcaggt ccagcgacag cgtgccgaga
     8701 tcatcagcga ccggttccag tgccggatcc ttttccagat agaggatctt gcggtagctg
     8761 tggcagtggt cgcaggtctc cgctcgcacg gcgctttcac gtacggcttc gccgctgtcg
     8821 ccgtccacat cggccagggc acggtaggca atgtccttgc cggcggcgcc gcactggctg
     8881 cactgcacgc gcacgtagtg ccactggcag gcacacagcg agcaggaaag ataacggtag
     8941 gacgcgtagg gcggccgtgc ctgcaccacg ctggccaccg gcagcgtgcc gcacagcggg
     9001 cacagccccg gcgcatcggc cagcggtttc aggtcggtgg ggcggaagct gtcggccagc
     9061 accgcccagt acacctgcag cgcgttcatc accagcagcg cagccaccgc atccagcgat
     9121 ggcgcatcat cgcgctccag caccgcatgc gcctgtgcat cgagccatgc gtcatcggca
     9181 gcggcaacgc gctgcagttc ctgccgggtt tccgccggca gcccggcctc atcggcacag
     9241 tgccggcaca aggtgcgcaa ccagtcgcgc cagtgcccat ccagctgcag cgtgttggcc
     9301 ggccgcaacg gcatcccagc gccggctgct gcactcgatt gctgggaacg cgcctgcgcc
     9361 tgcagggtct cgcgttgctg cggcgtcaac tcgtccagca gcgactgctg cgcatcggcc
     9421 agggccgcca gcagctgcag atagccgccg atggcgctgt gcgcagccag gctgcgcaat
     9481 cgcgccgcac gtccggcaaa cagcgacgcg gtatcgggca ggatgatgcg cggaacatcg
     9541 cgcgaggcca gcgtctcgat ttcaccgggt tcaaggatgc gttgcgccat gcagggccag
     9601 ccggaagaac cagcctccat cctcgccgtt gtcagcgctg gcgtccagcg cacagccggc
     9661 catttgaaat ggttggggtc agatccgttt tccataggaa aacggatctg accccatcgg
     9721 ttgttgccgt gt
//
LOCUS       DAOKIP010000156         9665 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.156,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000156 DAOKIP010000000
VERSION     DAOKIP010000156.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 9665)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9665)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9665
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.156"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            1..972
                     /locus_tag="QEL58_003008"
     CDS             1..972
                     /locus_tag="QEL58_003008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD:protein FMN transferase"
                     /protein_id="HDS1677452.1"
                     /translation="MTDTPLDIARLGGTTMGTTWSVSLVASRQRDLHPLHAGIQARLD
                     EVVAQMSTWESGSDLSRYNRAEAGQWCTLPGETRQVLACAQAIAAASDGAFDPTLGPL
                     VALWGFGAHAGERRQPDAATLQATRDRCGWQRLQWQDDALLQPGGLELDLSAIAKGFG
                     VDHVAAWLRAQGIAAALIEVGGELAGYGRKPDGQPWRVLVESAPEEDAHTGTPPRVLA
                     LDGLAVATSGDRWHQYQADGQAYSHSLDPRTGMPVRQVAAAVTVVADDAMHADAWATA
                     LTVLGREHGMALAEREGLAARYLQRTTEGPREFLSSAFQRLIDEQDA"
     gene            969..2573
                     /locus_tag="QEL58_003009"
     CDS             969..2573
                     /locus_tag="QEL58_003009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012479358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin domain-containing protein"
                     /protein_id="HDS1677453.1"
                     /translation="MSARPSRAWLGNALVLLLLALVGWALLRLHLGEAWWQGAPPIRQ
                     SQAALIATALYALACAALWWRGRPRDDAPSGDTAPILLVWASQTGFARELAERSAEAL
                     RSAGVPVRVRGLHEVDAALLTASQRALFIASTTGEGDPPDHALPFLRGAMTTPPPMQH
                     LHYGVLALGDRSYGHFCGFGHQLDQWLRQHGAHPLFDAIEVDNADPAALRHWQQLLGQ
                     LGGGASELPDWSPAEYQPWTLLQREHLNPGSPGGPVYWLRLQPPAGAAVQWQAGDIAE
                     IGPQHARQSARAWLDAQGFNADTVLDDGQTLLARVERSHLPSLVPAGDLPALLATLQP
                     LPHREYSIASVMADGAVELLLRRQLRADGTPGIGSGWLCDHAAIGEPVQLRLRRNDNF
                     HGVAADVPLLLIGNGTGIAGLRAHLHERARSGARRTWLLFGERSAAHDFHFREELHAM
                     QADGTLARLDTVFSRDGGTHRYVQDRLQAEAATLRQWIDDGATILVCGSLQGMAPAVD
                     AVIEQVLGVAGKEALLLAGRYRRDVY"
     gene            complement(2684..3292)
                     /locus_tag="QEL58_003010"
     CDS             complement(2684..3292)
                     /locus_tag="QEL58_003010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014646254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HutD family protein"
                     /protein_id="HDS1677454.1"
                     /translation="MNIDSLLHTPSQVISSLDYRRERWRNGLGWTREILRLPAQGDDW
                     ALRLSVAEIEQDAAFSAFPGVERELVLLQGNGVRLRFEDGRVAEVLPPHGRVRFAGEE
                     ALHGELVNGTTHDFNLMWKRDLLQAELLHRPLVGSMFFFCEPGVAWALHLLAGQAEFG
                     ADSGLPPLQAGDTAWLSAGERQRHALQGGGELLAIRISAAGA"
     gene            complement(3327..4052)
                     /locus_tag="QEL58_003011"
     CDS             complement(3327..4052)
                     /locus_tag="QEL58_003011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein L,D-transpeptidase catalytic domain
                     family protein"
                     /protein_id="HDS1677455.1"
                     /translation="MTASRLCRLAAFGLLATSASAPALAQTPALATSADDLAALLSRS
                     APKADRHVLQLAAHAMRCALQRPELGINGDRLSVIDYSRPSTEPRLWVFDLAHQRLLF
                     EEWVAHGRNSGDNRTEHFSNRDGSFMSSLGAFTAQETYMGGNGYSLRLAGLEPGFNDR
                     ARERAIVIHGAPYVNPATAQLQGRLGRSLGCPAVRLSVARPLIDALRGGTMVFAYYPD
                     QDWLKHSQLLGGECGGQGTLATR"
     gene            complement(4070..5155)
                     /locus_tag="QEL58_003012"
     CDS             complement(4070..5155)
                     /locus_tag="QEL58_003012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005408414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HDS1677456.1"
                     /translation="MLPRRPTTLMLALALALPLLAYAAAPTPAAKPTAAAARTADVRG
                     PTDLKPGEFLWHPEISPTGPIVLVVSLDEQRAYVYRNGIAIGLTTISSGKAGHETPTG
                     VFTILQKDKDHRSNLYNSAPMPYMQRLTWDGIALHGGSLPGHPASHGCVRLPQAFAQK
                     LFSETQRGDTVVVADAKSSPMTLAYPSVLAPVNARGQALPETEGGSAAQAWWNDSAAP
                     AGQVGILVSLHDQRLYVLRDGVMIGESPLKADALPAFQGTTLFVMGQGYSDTPSPLDV
                     NQRLHQWTAYPLLGQDRAQATPDLLATPSLPMALPADFARQLYQVLVPGTTLLVTSLP
                     AVRPSPAESGMQPVLESEPPGSTLKGN"
     gene            complement(5507..5905)
                     /locus_tag="QEL58_003013"
     CDS             complement(5507..5905)
                     /locus_tag="QEL58_003013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-hairpin-helix domain-containing protein"
                     /protein_id="HDS1677457.1"
                     /translation="MVTDTVSTDGNAGRGGQNHKEIHVVPWFVVLRALVLMMGIAGAH
                     AAELIDINRADAQALQQGLTMVGAAKAEAIVEHRRRHGPFHRVEDLKQVKGIGKAIVE
                     RNRQRITVGNRLLPADPVPGSVPVRTVPRR"
     gene            6033..7526
                     /locus_tag="QEL58_003014"
     CDS             6033..7526
                     /locus_tag="QEL58_003014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011051939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M20 family metallopeptidase"
                     /protein_id="HDS1677458.1"
                     /translation="MDSAKLGQFVNDKWDSEIVPQLVDYIRIPNKSPMFDANWVQNGY
                     MEQAVTLMENWAKAQQLPGLKVEVVRLEGRTPLIFLEIPATGGETGDDTILLYGHLDK
                     QPEMTGWDDDLGPWTPVLRGDKLYGRGGADDGYAIFGSLAAVLALQAQGLPHARCVVL
                     IEACEESGSYDLPAYVDHLADRIGKPSLVVCLDSGCANYDQLWCTTSLRGLTGGNFTV
                     KVLNEGVHSGDASGVIPSSFRLVRQLLSRIEDQDTGRILIDGMNVEIPAERQAQAKRA
                     AEVVDTEIFEKFPMVDGLRPMNEDLTELVLNRTWRPALSVTGVGGMPPLESAGNVLRP
                     QTSVKLSLRLPPTADGKTCGELLKEALLRDPPNGAQVTLDLEKASTGWNAPAMAPWLT
                     QAIDDASQAFFGKPAMYMGEGGSIPFMGMLGEKFPGAQFMITGVLGPHSNAHGPNEFL
                     HIPMGKKVTACVSKVISEHYAASLRGETSGSPVAADSGTRHGDHGCC"
     gene            7595..7864
                     /locus_tag="QEL58_003015"
     CDS             7595..7864
                     /locus_tag="QEL58_003015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016851108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GlsB/YeaQ/YmgE family stress response membrane
                     protein"
                     /protein_id="HDS1677459.1"
                     /translation="MNGLFGSSSWLYIILVGFLVGLLGRFFMPGNNRMGCLLTIVLGI
                     LGALLAGWFGQYMGWYAPGEPAGFLGAVLGAIVVLAILRLFSGRR"
     gene            7929..8954
                     /locus_tag="QEL58_003016"
     CDS             7929..8954
                     /locus_tag="QEL58_003016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014646249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphotransferase"
                     /protein_id="HDS1677460.1"
                     /translation="MTEPASDPQRSAQRLQWARIQLDDANAVVERASVDAGMRSYWRT
                     TSARGSHIVMDAPPGLEDPRPWLRMRGLLHDHGLRVPALLAQDLDAGFLLLEDLGGPT
                     LAKILDERNADEWFGRSIEQLLRLQAIPVPADFGQFGEALLQRDAGLFDEWFLQRHLH
                     LELDCGEIEGLQLVHRRLMDNALGQAQLMTHRDYMPRNLMPVDNGPAVLDFQDLVRGP
                     IAYDTVSLFKDAFLSWPLQRVDEWLAQYHARARAAGLPVPDRATFLRDADWMGIQRHV
                     KILGLFCRLRYRDNKGHYLDDAPRFIGYLDEVLPRYRELAPLQQLLEDRIKPALAELA
                     APMRVAR"
     gene            8951..9661
                     /locus_tag="QEL58_003017"
     CDS             8951..9661
                     /locus_tag="QEL58_003017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014646248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase family protein"
                     /protein_id="HDS1677461.1"
                     /translation="MKALIFAAGLGERMRPLTLHTPKPLLDVAGKPLIVWHLERLAAL
                     GVREVVVNTSWLAEQFPAALGDGSQWGLRLHFMYEGQTPLETGGGILNALPVLGDAPF
                     LVVNGDIWTDFDFATLPREPQGQAHLVLVDNPVQHPHGDYRLDAQGVLHHDREGPCLT
                     YAGIGVYRPSIVADWRAVIGDAPGSERRPPKFSVVPLQKHFMAQGLMTGQHHRGRWTD
                     VGTVDRLRALDVELAANG"
BASE COUNT         1517 a         3327 c         3251 g         1570 t
ORIGIN      
        1 atgaccgata ccccgctcga tatcgcccgc ctcggtggca ccaccatggg caccacctgg
       61 agtgtgtcgc tggtcgcgtc gcgccagcgc gacctgcacc cgctgcatgc tggcatccag
      121 gcgcggctgg acgaggtggt cgcgcagatg agcacctggg aatccggctc ggacctcagc
      181 cgctacaacc gcgccgaggc cggccagtgg tgcacgctgc cgggcgagac gcgccaggtg
      241 ctggcctgcg cacaggccat cgcggcggcc agtgacggcg ccttcgaccc cacccttggc
      301 ccgttggttg cactgtgggg tttcggtgcg catgccggtg aacgccgaca acccgatgcc
      361 gccaccctgc aggccacgcg cgaccgctgt ggttggcagc gcctgcagtg gcaggacgat
      421 gcgctgctgc agccgggcgg gctggaactg gatctctctg cgatcgccaa gggcttcggc
      481 gtcgatcacg tcgccgcctg gctgcgtgca caaggcatcg cggcggcgct gatcgaagtc
      541 ggcggcgagc tggcgggtta cggccgcaag cccgacggcc agccatggcg cgtgctggtg
      601 gaatcggcgc cggaagaaga cgcgcacacc gggaccccgc cgcgggtact cgcgttggac
      661 gggcttgcgg tggccacttc aggtgatcgc tggcaccagt accaggccga tggccaggct
      721 tacagccaca gtctggaccc gcgtaccggc atgccggtgc gccaggttgc agcggcggtg
      781 accgtggttg ccgacgacgc gatgcatgcc gatgcctggg ccaccgcgct gaccgtgctc
      841 ggccgcgagc acggcatggc actggccgaa cgcgagggac tggccgcacg ctacctgcaa
      901 cgcacaacag aaggcccccg cgaattcctc agcagcgcct tccagcgcct gatcgacgag
      961 caggatgcat gagcgcacgt ccgtcgcgcg cgtggctcgg caacgctctg gtcctgcttc
     1021 tgctggcgct ggtcgggtgg gcgctgctgc gcctgcacct gggcgaggcc tggtggcaag
     1081 gtgcgccccc gatacggcaa tcgcaggccg cgctgatcgc tacggcgctg tatgcgctgg
     1141 cctgtgccgc gttgtggtgg cgtggccgcc cgcgtgacga cgccccatcg ggcgataccg
     1201 cgccgatcct gctggtctgg gccagccaga ccggtttcgc ccgcgaactg gccgaacgca
     1261 gtgccgaggc cctgcgtagt gccggcgtgc cggtgcgtgt gcgcggactg catgaggtgg
     1321 acgcagcact gctgacggcc agccagcgcg cgttgttcat cgccagcacc accggtgagg
     1381 gcgacccgcc cgaccatgcg ttgccgttcc tgcgcggggc aatgaccacg ccaccgccga
     1441 tgcagcacct gcactacggc gtgctcgcgc tgggcgatcg cagctatggc cacttctgtg
     1501 gattcggcca ccaactggac cagtggctgc gccagcacgg tgcgcatccg ctgttcgatg
     1561 cgatcgaagt cgacaacgcc gatccggccg cgctgcgcca ttggcagcag ctgctggggc
     1621 agctcggtgg cggcgccagt gaactgcccg actggagccc ggccgagtat cagccgtgga
     1681 cgctgctgca gcgcgagcac ctgaacccgg gcagccccgg tggtccggtg tactggctgc
     1741 gcctgcagcc acccgctggc gccgctgtgc agtggcaggc cggcgacatc gctgagatcg
     1801 gtccgcagca cgctcgccaa agcgcgcgcg cctggctgga tgcacagggt ttcaatgcgg
     1861 acaccgtgct ggatgacgga cagaccctgc tggcccgcgt cgaacgctcg cacctgccct
     1921 cactggttcc tgccggggat ctgccggcgt tgctggccac cctgcagccg ctgccacatc
     1981 gcgagtactc gatcgcctcg gtcatggccg acggcgcagt ggaactattg ctgcgtcgcc
     2041 agctgcgcgc cgatggcaca cccggcatcg gcagcggctg gctgtgcgac cacgcggcca
     2101 tcggcgaacc ggtgcagctg cgtctgcgcc gcaacgacaa tttccatggc gttgccgcag
     2161 atgtgccgct gctgctgatc ggcaacggca ctggcatcgc cggcctgcgc gcgcatctgc
     2221 acgaacgcgc gcgcagcggc gcacgccgca cctggctgct gttcggtgag cgcagcgccg
     2281 cgcacgactt ccacttcagg gaagagctgc atgcgatgca ggccgatggc acgctggcgc
     2341 ggctggatac ggtgttcagc cgtgacggcg gcacgcaccg ttatgtacag gaccggttgc
     2401 aggctgaagc ggcaacactt cgccagtgga tcgatgacgg cgcgacaatc ctggtctgcg
     2461 gcagcctgca gggcatggcc ccagccgtgg atgcggtgat cgagcaggtg ctgggtgttg
     2521 ccggcaagga agcgttgctg ctggccggcc gttaccggcg cgatgtgtat tgaggccgcc
     2581 gcatcctggt gggtgcgaac cgccttctgg tgggtgcgaa ccttggttcg cacggtgacg
     2641 cggtatcggc ggccgcgtcc acgcacggcg cagctctaca agatcatgcc cccgccgcgc
     2701 tgatccgtat cgccagcagt tcgccaccgc cctgcaacgc atgtcgctgc cgctcaccgg
     2761 ctgacaacca cgccgtatct ccggcctgca acggcggcaa gccactgtca gcaccaaatt
     2821 cggcctgacc ggccagcagg tgcagcgccc aggccacgcc cggttcgcag aagaagaaca
     2881 tcgaccccac aagcggccgg tgcaacagct cggcctgcag cagatcgcgc ttccacatca
     2941 ggttgaagtc atgggtggtg ccattgacca gttcgccatg cagcgcttcc tcacccgcaa
     3001 accgcacgcg accgtgcggt ggcagcactt cggccacgcg gccatcctcg aagcgaagac
     3061 gcacaccatt gccctgcagc aacaccagct cgcgctccac accggggaag gcagagaacg
     3121 ccgcatcctg ttcgatctcg gccaccgaca ggcgcaacgc ccagtcatcg ccttgtgccg
     3181 gcaggcgcag gatctcgcgg gtccagccca ggccgttgcg ccagcgttcg cggcgatagt
     3241 ccaggctgga aatcacctgg ctcggggtgt gcagcaagga gtcgatattc atcggcgcat
     3301 tgcatcacgc cgcgcgccgt cgcgcatcac cgcgtggcga gcgtgccctg gccaccacac
     3361 tcgccaccca gcagctgcga atgcttcagc cagtcctggt cggggtagta ggcgaacacc
     3421 atcgtgccgc cacgcaacgc atcgatcagc ggcctggcca ccgacaggcg cacggccggg
     3481 cagccgaggc tgcggccaag ccgcccctgc agctgcgcgg tggccgggtt cacgtagggc
     3541 gcaccgtgga tgacgatcgc gcgttcgcgc gcacggtcgt tgaagcccgg ctccaacccg
     3601 gccaggcgca gcgaatagcc gttgccgccc atgtaggtct cctgcgcggt gaacgcgccg
     3661 aggctggaca tgaaactgcc gtcgcgattg gagaaatgct cggtgcggtt gtcgccgctg
     3721 ttgcgtccgt gcgccaccca ttcctcgaac agcaggcgct gatgggccag gtcgaacacc
     3781 cacagccgcg gctcggtgga cggccgcgag tagtcgatca cgctgaggcg atcaccattg
     3841 atgcccagct cgggccgctg caacgcacag cgcatggcgt gcgccgccag ctgcaacacg
     3901 tggcggtcgg ccttgggcgc actgcgcgac agcaaggcag ccaggtcatc ggcactggtg
     3961 gcaagggcgg gcgtctgtgc cagcgccggg gcgctggcgg aggtcgccag caggccgaac
     4021 gcggccagcc ggcacaggcg ggatgcagtc atgggcacaa cggggaggct caattaccct
     4081 tcagggtgga ccctggcggc tcggattcca agaccggctg cattccggat tcagccgggc
     4141 ttgggcggac cgccggcagc gaggtaacca gcagggtcgt gcccggcacc agcacctggt
     4201 acagctggcg ggcgaaatcg gccggcagcg ccatcggcag cgagggcgtg gccagcaggt
     4261 ccggggtggc ctgggcacgg tcctggccca gcagcgggta ggccgtccac tggtgcaggc
     4321 gctggttcac atccagcggg ctgggggtat cgctgtagcc ctgccccatc acgaacaggg
     4381 tggtgccctg gaacgccggc agggcgtcgg ccttcagcgg cgactcgccg atcatcacgc
     4441 catcgcgcaa tacgtacagg cgctggtcgt gcaggctgac caggatgccg acctggccgg
     4501 ccggggccgc gctgtcgttc caccaggcct gtgcggcact gccgccctcg gtttccggca
     4561 gcgcctgccc gcgcgcattc accggtgcca gcaccgaggg ataggccagg gtcatcggcg
     4621 agctcttggc atcggccacc accacggtat cgccgcgctg ggtttcgctg aacagcttct
     4681 gcgcgaaggc ctgcggcagg cgcacgcagc cgtgcgaagc cgggtggcca ggcaggctgc
     4741 cgccatgcag ggcgatgcca tcccaggtca accgctgcat gtagggcatc ggcgcgctgt
     4801 tgtagaggtt ggacctgtgg tccttgtcct tctgcaggat ggtgaacaca ccggtcggtg
     4861 tctcgtgccc ggcctttccc gagctgatcg tggtcaggcc gatggcgatg ccgttgcggt
     4921 acacgtaggc ccgctgctca tccaggctga ccaccagcac gatcgggccg gttggcgaga
     4981 tttccggatg ccacaggaac tcgcccggct tgaggtcggt cggcccgcgc acgtctgcgg
     5041 tgcgggcggc agcagcggtc ggtttggccg ccggcgtcgg cgcagcggcg taggccagca
     5101 gcggcagggc cagcgcaagg gcgagcatca gggtcgtggg gcggcgcgga agcatccagc
     5161 ggtgtccttt ccatgcggag cggccaccgt acaccatcgg cccgtggtgg ccgcggcaaa
     5221 accaggcgcc ggaaatgaaa ctgcccggcg acacagccat gtgtcgtacc gggcaatcgt
     5281 tacgtccttg tcggcctgct gccgccccct cgcatcctgc gctgtggggg tagcgttgcg
     5341 tcctgcacgc ggccgcgtct gtcctgcttg tatctcagcc ccttccacag gtctgtgatg
     5401 ccaccatcct ggtgattggt gccgcgtcct gcggcggtcg gtggtcacgg ccatcctgtc
     5461 cgtgtccgct gaaccagcct cctgccggtt ccgacgattc ctgctgtcag cgcctgggta
     5521 cggtccgcac cggtaccgat ccgggtaccg gatccgctgg caacagcctg ttgcctacgg
     5581 tgatccgctg tcgattccgt tcgacgattg ctttccctat ccccttcacc tgcttcaggt
     5641 cctcgacgcg gtgaaacggg ccgtgtctgc gccggtgctc gacgatcgcc tcggccttgg
     5701 cggctccgac catcgtcaat ccctgctgca gcgcctgtgc atcggcgcgg ttgatatcga
     5761 tcagttcggc ggcatgtgcc cccgcgatcc ccatcatcag caccagtgcc ctcaacacga
     5821 caaaccaagg cacgacgtgt atctccttgt ggttctggcc gccccgaccg gcattcccgt
     5881 cggtcgaaac agtgtccgtc accacatgtg cacagcctat cggtttcccg catttccgta
     5941 agccagccaa atacccgacg tgatgtagga aaaaccctac ccccagcaca ggcgtagaat
     6001 gcgtagatca gcccatgcaa ccggagtttc agatggacag cgccaagctc ggccaattcg
     6061 tcaatgacaa gtgggacagc gagatcgtcc cgcaattggt cgactacatc cgcattccca
     6121 acaagtcgcc gatgttcgac gccaattggg tgcagaacgg ctacatggaa caggcagtca
     6181 ccctgatgga gaactgggcc aaggcgcagc agctgcccgg cctgaaggtc gaggtggtgc
     6241 gcctggaagg ccgtaccccg ctgatcttcc tggaaattcc ggccaccggc ggcgaaaccg
     6301 gcgacgacac catcctgctc tacggccacc tcgacaagca accggaaatg accggctggg
     6361 acgacgacct cggcccctgg accccggtcc tgcgcggcga caagctgtac ggccgcggcg
     6421 gcgccgacga cggctacgcc atcttcggct cgctggccgc cgtgctggcg ctgcaggccc
     6481 agggcctgcc gcacgcccgc tgcgtggtgc ttattgaagc ctgtgaagaa tcgggcagct
     6541 acgacctgcc ggcctacgtc gaccacctgg ccgaccgcat cggcaagccg tcgctggtgg
     6601 tctgcctgga ttcgggctgc gccaactacg accagctgtg gtgcaccacc tcgctgcgcg
     6661 gcctgaccgg cggcaacttc accgtgaagg tgctcaacga gggcgtgcat tccggcgatg
     6721 cctccggcgt gatcccgtcc agcttccgcc tggtgcgcca gctgctgtcg cgcatcgagg
     6781 accaggacac cggccgcatc ctgatcgacg gcatgaacgt ggagatcccg gccgagcgcc
     6841 aggcccaggc caagcgcgct gccgaagtgg tcgataccga gatcttcgag aagttcccga
     6901 tggtcgacgg cctgcgcccg atgaacgaag acctgaccga gctggtgctc aaccgcacct
     6961 ggcgcccggc gctgtcggtc accggcgtgg gcggcatgcc gccgctggaa tcggccggca
     7021 acgtgctgcg cccgcagacc tcggtgaagc tgtcgctgcg cctgccgccg accgccgacg
     7081 gcaagacctg cggcgaactg ctgaaggaag cactgctgcg cgatccgccg aacggcgccc
     7141 aggtcaccct ggacctggaa aaggcctcca ccggctggaa cgccccggcc atggcgccgt
     7201 ggctgaccca ggccatcgac gacgccagcc aggccttctt cggcaagccg gccatgtaca
     7261 tgggcgaagg cggctcgatc ccgttcatgg gcatgctggg cgagaagttc ccgggcgccc
     7321 agttcatgat caccggcgtg ctcggcccgc actccaacgc gcatggcccg aacgagttcc
     7381 tgcacatccc gatgggcaag aaggtcaccg cctgcgtgtc caaggtgatc agcgagcact
     7441 acgccgccag cctgcgtggc gagaccagtg gttcgccggt ggccgccgac agcggcaccc
     7501 gccacggcga ccacggctgc tgctgatcca gcgcccgtga cggacgcagc ctggccttgc
     7561 taggctgcgt ccacccctag cggaacgcat gcacatgaat ggtctgttcg gcagcagcag
     7621 ctggctctac atcatcctgg tcggcttcct ggtcggcctg cttgggcgct tcttcatgcc
     7681 cggcaacaac cgcatgggct gcctgctgac catcgtgctg ggcattctcg gcgccctgct
     7741 ggccggctgg ttcggccagt acatgggctg gtacgcccct ggtgaaccgg ccggtttcct
     7801 cggtgccgtg ctcggcgcga tcgtcgtgct ggcgatcctg cgcctgttca gcggtcgtcg
     7861 ctgacgctga ttcccccttc ccttctgttc ccgacgttgg cgcgcccggc gcgcccggat
     7921 atgcctgcat gaccgaaccc gcctccgatc cccagcgcag cgcgcagcgc ctgcagtggg
     7981 cccgtatcca gctggatgat gccaacgccg tggtcgaacg cgcctcggtc gatgccggca
     8041 tgcgcagcta ttggcgcacc accagcgcgc gcggcagcca catcgtgatg gacgcaccgc
     8101 cggggctgga agatccgcgg ccatggctgc gcatgcgcgg cctgctgcac gaccacggcc
     8161 tgcgcgtgcc tgcactgctg gcgcaggacc tggacgccgg tttcctgctg ctggaagacc
     8221 ttggcggccc gaccctggcg aagatcctcg acgagcgcaa tgccgatgag tggttcggcc
     8281 gctccatcga acagctgctg cgcctgcagg cgatcccggt gccggccgac ttcggccagt
     8341 tcggcgaagc gctgctgcag cgcgatgccg gcctgttcga cgaatggttc ctgcagcgcc
     8401 acctgcacct ggagctggac tgcggtgaga tcgaaggcct gcagctggtg caccgccggc
     8461 tgatggacaa cgcgctcggc caggcccagc tgatgactca ccgtgactac atgccacgca
     8521 acctgatgcc ggtcgacaac ggcccggccg tgctggattt ccaggacctg gtgcgcggcc
     8581 cgatcgccta cgacacggtg agcctgttca aggatgcgtt cctgagctgg ccgctgcagc
     8641 gcgtggatga atggctggcg cagtaccacg cgcgcgcacg cgctgccggc ctgccggtgc
     8701 ccgaccgcgc caccttcctg cgcgatgccg actggatggg catccagcgc cacgtgaaga
     8761 tcctcggcct gttctgccgc ctgcgctatc gcgacaacaa gggccactac ctggacgacg
     8821 cgccgcgctt catcggctat ctggatgaag tgctgccacg ctaccgcgag ctggcgccgt
     8881 tgcagcagct gctggaagac cgcatcaagc cggcgctggc cgagctggcc gcaccgatgc
     8941 gcgtggcccg atgaaggcgc tgatctttgc cgctggcctt ggcgagcgca tgcgtccgct
     9001 gaccctgcat acgcccaagc cactgctgga cgtggccggc aagccgctga tcgtctggca
     9061 tcttgagcgc ctggccgcac tcggggtgcg cgaggtggtg gtcaacactt catggctggc
     9121 cgagcagttt ccggcagcgc tgggtgatgg cagccagtgg ggcctgcgac tgcatttcat
     9181 gtacgaagga cagaccccgc tggaaaccgg cggcggcatc ctcaacgcac tgccggtatt
     9241 gggtgatgcg ccgttcctgg tggtgaacgg cgatatctgg accgatttcg atttcgccac
     9301 gctgccccgc gagccgcagg gccaggcgca tctggtgctg gtcgacaatc ctgtgcagca
     9361 cccgcacggt gactatcggc tggacgcgca gggcgtgttg catcacgacc gcgaaggccc
     9421 gtgcctgacc tatgccggta tcggtgtata ccgcccttcg atcgtggccg attggcgcgc
     9481 ggtgatcggg gatgccccgg gcagcgagcg gcggccgccg aagttctcgg tggtgccgct
     9541 gcagaagcat ttcatggcgc aggggttgat gaccgggcag caccatcgtg ggcgctggac
     9601 cgatgtcggg acggtggatc ggctgcgcgc gctggatgtt gagttggcag cgaacggctg
     9661 agccc
//
LOCUS       DAOKIP010000157         9647 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.157,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000157 DAOKIP010000000
VERSION     DAOKIP010000157.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 9647)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9647)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9647
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.157"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..826)
                     /locus_tag="QEL58_003018"
     CDS             complement(<1..826)
                     /locus_tag="QEL58_003018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008268581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease/exonuclease/phosphatase family
                     protein"
                     /protein_id="HDS1677462.1"
                     /translation="MRPLAYARLLLSCLLLLPALQAQARPQAPASASSEGEPRQLTVA
                     ALELPSRDDAQWKQRREQVAQLLTDLQPDVISVQQVLQQQGRNPACWLASRLRYSCDF
                     VTADPPSQPLRHGNAMLTRLPVSEDGVTLLHPPGTFSAAGMMRLKLGQALVNIYVARL
                     RPEPDEAPARQHQTNDLMTWIGATAEGMPSLIAGDFSASTVELVRSTPGFQPARRNPG
                     GRPEPPAASGGGATGHGLDVLFQVKHFGGIRQQPILLPADGDLPGLRLGVMATLRLQ"
     gene            1011..2576
                     /locus_tag="QEL58_003019"
     CDS             1011..2576
                     /locus_tag="QEL58_003019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012511603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDS1677463.1"
                     /translation="MSHDAVAPIAGQGRMPRQIPYIIGNEACERFSFYGMRNILVQFL
                     ITSLLLQEITAEGRAGEAKDIMHSFMIGVYFFPLLGGWLADRFFGKYHTILWFSLVYC
                     AGHLCLALFENSREGFFLGLGLIALGAGGIKPLVASFMGDQFDQSNKHLAKLVFDAFY
                     WIINFGSLFASLLIPLVLKNWGPQWAFGIPGILMFVATFVFWLGRKRYVLVPLPPKDP
                     HSFANVVRTALTARVAGQGRPGLVIAALGLVLAVASFGLVGSLGIVICLCLALVAILA
                     GIGGGTWLQLDRARGQHPAEAVEGVRSVLRVLVIFALTTPFFSLFDQKASTWVLQGQQ
                     MQMPSWFTASQMQALNPLLVMILIPFNNLVLYPALRRFGFEPTALRRMTAGIAFSGLA
                     WIVIGGIQVVMDGGNAMSIFWQILPYALLTFGEVLVSATGLEFAYSQAPQAMKGVVMS
                     FWNLTTTIGNLWVLLSNAAVRNDTVTHQIAGTGLSEAAFLMFFFAGFAFIAALAFGWY
                     AKRYRMVDNYRSA"
     gene            2584..3210
                     /locus_tag="QEL58_003020"
     CDS             2584..3210
                     /locus_tag="QEL58_003020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012511602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease"
                     /protein_id="HDS1677464.1"
                     /translation="MTPVNLLLIAITAILSWMAFNNRKLADRLILWPPAVDRHRQYDR
                     LVTYGFIHADWSHLIFNMITLFFFGGFIESVMVELTGSYLTYPAFYIGALLVSILPSY
                     LKNQKNPNYLSLGASGAVSAVLFAFILIKPWSIILVFFIPAPAIIYAAFYVGYSIWMD
                     KRGGDRINHSAHLAGAAFGVIFMLAMQPSIFNHFLRELSNPTFRLGGG"
     gene            complement(3254..3415)
                     /locus_tag="QEL58_003021"
     CDS             complement(3254..3415)
                     /locus_tag="QEL58_003021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005413966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677465.1"
                     /translation="MHPSDPHSDTDRALLEGLLQLAVEGQTEDQDFQRIGEEVFARLL
                     DTYGQQTTA"
     gene            3625..3927
                     /locus_tag="QEL58_003022"
     CDS             3625..3927
                     /locus_tag="QEL58_003022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006455911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HDS1677466.1"
                     /translation="MASVTPPGLAYEVEHDLASHRFTARVRGQLAVLDYQIKRRRMVI
                     THTEVPEPIAGRGIAGELTRVALRFAREQKYKVVPACSYAEAFLQRHEEYHDLLVG"
     gene            3964..4845
                     /locus_tag="QEL58_003023"
     CDS             3964..4845
                     /locus_tag="QEL58_003023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4163 domain-containing protein"
                     /protein_id="HDS1677467.1"
                     /translation="MYKHEQGIPMKIGNNRPLRGSVLAGVVGVLLLAGCQRESEPAPA
                     TDAAPAAEAPVAGETPATEAPLDLRDVIENNEREVVGISYPAGIDRYPGLARALQDYA
                     TSARSDLQQALDGLGNDKPTMPYELSLSFEKVLETPQLVVVSADGSRYTGGAHGEPLV
                     ARFVWLPQHQQMLSAEKLVADAKGWKAISDFVADQLRERVATRLSGEDMDPAQLQESL
                     RNASRMIADGTGPQADNFSQFQPLTDDKGQITALRFVFPPYQVGPYSDGTQTADVPAA
                     VLLPHVAKDYVELFARG"
     gene            4865..5980
                     /gene="cfa"
                     /locus_tag="QEL58_003024"
     CDS             4865..5980
                     /gene="cfa"
                     /locus_tag="QEL58_003024"
                     /EC_number="2.1.1.79"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012480799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclopropane fatty acyl phospholipid synthase"
                     /protein_id="HDS1677468.1"
                     /translation="MDTGLQERVAGLLQEAGVRIGGTQPQDIQVHDPRFFARVMAHGS
                     LGLGESYMDGWWDANVLDDFLVHLMQAHLDERVHGWREVADALKARLFNLQAGQGSYE
                     VGRRHYDLGNDLYQAMLGTRLVYSCGYWRTADDLDAAQEAKLDLVCRKLGLRPGQRVL
                     DIGCGWGEALKFAAERYGVSGVGVTISREQAEFARELCAGLPIEIRLQDYRELDEPFD
                     AIFSIGMFEHVGDKNYSSFFEVARRCLSPRGLLLLHTIGTNISRHRTDPWIARYIFPN
                     SMLPSAVQISKAFEGRFVLEDWHNFGTDYDLTLQAWRRNVEAAWPRLDARYDEHFRRM
                     WRFYLAGSMATFRCRHAQLWQLVLSPEGVPGGYVAPR"
     gene            6239..6727
                     /locus_tag="QEL58_003025"
     CDS             6239..6727
                     /locus_tag="QEL58_003025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677469.1"
                     /translation="MQRISTGLKTLMVSTVVVASAAFIDPAQAFDGFVNYTPEFGGRV
                     ACSGTASVACFRWDISSAVNDDMVMTRQWMDRGEVISGIVTGSPEGSSELLLTGHGEN
                     WQAPIIYARYGAAASELDHDCAAPLTDGCAMPLIEGEQIHYSIKVRVVGTELVHFYAL
                     GL"
     gene            complement(6840..9008)
                     /locus_tag="QEL58_003026"
     CDS             complement(6840..9008)
                     /locus_tag="QEL58_003026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014647732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M3 family metallopeptidase"
                     /protein_id="HDS1677470.1"
                     /translation="MTTRLALAVAMTLGLALPAYSAGAATAAASTTAQQANPFFADSP
                     LPLHFPQFDRIKDSDFAPAFDAGMAQQLKEVEVIANNKAKPTFDNTIIALEKSGDILD
                     RATTVFFSLVGADTNDTRKKLQADYSAKFAAHSDAIALNGKLFARIQALYDTRSQLGL
                     DAEGVRLVEKYYDNYVRAGAKLSEADKATLKAMNAELANLGTKFSQNVQSEVNASAIT
                     VDDVKELAGLSKEQIAAAAEAAKARGLEGKYVITLLNTTGQPPLTNLANRALRQKIYE
                     ASVSRGSRGGEFDNTALVSRIMQLRADKAKLMGFANFAAYNLTNQTAKTPEAVNAMLG
                     KLAPAAVANAKREAADLQAMIDQEQKAAGKKTFALEPWDWAFYSEKVRQAKYNFDESQ
                     LKPYFEMKNVLENGVFYAAGQEFGLTFKQRTDLPVYHDDVTVYDVFDADGSQLAIFIF
                     DPYARASKRGGAWMNSYVSQSKLTGFKPVVANHLNIPKPPAGQPTLLTWDEVNTTFHE
                     FGHALHGMFSNVKYPYFSGTSVPRDFVEFPSQVNEMWSDNPAILKNYAKHYQNGSAMP
                     QALLDKVLAAAKFNQGFATTEYLGAAMLDQRWHQIGADQVPAAKDVMAFERAALEKDG
                     IYYAPVPPRYKTPYFSHIMGGYSAGYYAYIWSEVLDANTQKWFKDNGGLSRKNGDHFR
                     ATLLSKGGSVDAMQLFRDFAGHEPQIEPLLEKRGLTGAGN"
     gene            9175..>9647
                     /locus_tag="QEL58_003027"
     CDS             9175..>9647
                     /locus_tag="QEL58_003027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione peroxidase"
                     /protein_id="HDS1677471.1"
                     /translation="MTTTYDFSFRDLDGQPQALAQFQGRPLLLVNVASRCGFTPQYTG
                     LEQLWQDYRERGLVVIGFPCNQFGAQEPGDAAQIRQFCSLDYPVSFPLSEKIEVNGSG
                     ADPLWAWLSREKRGLLGIARIKWNFSKFLVDRKGRVVSRHAPTTTPEQLRSAIEAL"
BASE COUNT         1529 a         3064 c         3232 g         1822 t
ORIGIN      
        1 cctgcaggcg cagggttgcc atcacgccca ggcgcaggcc gggcaggtcg ccatcggccg
       61 gcagcaggat cggttgctgg cggatgccgc cgaaatgctt gacctggaac agcacgtcca
      121 ggccatggcc ggtggctcca ccgccactgg ccgctggcgg ttccgggcgg ccgccaggat
      181 tgcgccgggc cggctggaag ccgggcgtgc tgcgcaccag ttccacggtg gaggccgaga
      241 agtcgccggc gatcaggctc ggcatgccct cggcggtggc gccgatccag gtcatcaggt
      301 cgttggtctg gtgctggcgc gcgggggcct cgtccggctc cgggcgcagc cgcgccacgt
      361 agatgttgac cagcgcctgg cccagcttca gccgcatcat gccggccgcg ctgaacgtcc
      421 cgggtggatg cagcagggtg acaccgtcct cgctgaccgg cagccgggtc agcatggcat
      481 tgccatgccg cagcggctgg ctgggcggat cggcggtgac gaagtcgcag ctgtagcgca
      541 gccggctggc cagccagcag gccggattgc ggccctgctg ctgcagcacc tgctgtaccg
      601 agatcacgtc cggttgcagg tcggtcagca gctgcgcgac ctgctcgcgg cgctgcttcc
      661 attgcgcatc gtcgcggctg ggcagttcca gtgcggccac ggtcagttgc cggggctcgc
      721 cctcgctgct ggccgaggcc ggcgcctgcg gtcgcgcctg ggcctgcaac gccggcaaca
      781 gcagcaggca gctgagcagg agtcgggcgt aggcgagggg gcgcataacg ataagtttac
      841 gcttttgtcg tgcaggtgcc gtgacttccg gcacagccag gagcgcctgc catggattgc
      901 aggagcgcct gccatggatt ggcaccgttg tcatgcagcc ctgcagcgtg cttcgcaagg
      961 cctggttccg gtaaccttgc gcctttcgct ttgcaggaat gccttacagg atgagccacg
     1021 acgcagttgc ccccatcgcc ggccagggaa ggatgccgcg ccagattccg tacatcatcg
     1081 gcaatgaggc ctgcgaacgg ttcagtttct acgggatgcg caacatcctg gtgcagttcc
     1141 tgatcacctc gctgctgctg caggaaatca ctgcggaagg ccgtgccggt gaagccaagg
     1201 acatcatgca cagcttcatg atcggcgtgt atttcttccc gctgctcggt ggctggctgg
     1261 ccgacaggtt ctttggcaag taccacacca tcctctggtt cagcctggtc tactgcgccg
     1321 gccacctgtg cctggcgctg ttcgagaaca gccgcgaagg cttcttcctt ggcctgggac
     1381 tgatcgcgct cggcgctggc ggcatcaagc cgctggtggc ctcgttcatg ggtgaccagt
     1441 tcgaccagag caacaagcac ctggccaagc tcgtcttcga cgccttctac tggatcatca
     1501 acttcggctc gctgttcgcc tcgctgctga tcccgctggt gctgaagaac tggggcccgc
     1561 agtgggcgtt cggcatcccg ggcatcctga tgttcgtggc caccttcgtg ttctggctgg
     1621 gccgcaagcg ctacgtgctg gtgccgctgc cgccgaagga cccgcattcg ttcgccaacg
     1681 tggtgcgtac cgcgctgacc gcgcgcgttg ccgggcaggg ccgtccgggc ctggtgatcg
     1741 ccgcgctcgg cctggtgctg gccgtggcct cgttcgggct ggtcggctcg ctgggcatcg
     1801 tcatctgcct gtgccttgcg ctggtcgcca tcctggccgg catcggcggc ggcacctggc
     1861 tgcagctgga ccgtgcccgc ggccagcatc cggccgaagc cgtggaaggc gtgcgctcgg
     1921 tgctgcgcgt gctggtgatc ttcgcgctga ccacgccgtt cttctcgctg ttcgaccaga
     1981 aggcctcgac gtgggtcctg cagggccagc agatgcagat gccgagctgg ttcaccgcct
     2041 cgcagatgca ggcattgaac ccgctgctgg tgatgatcct gattcccttc aacaacctgg
     2101 tgctgtaccc ggcgctgcgc cgcttcggct tcgagccgac cgcgctgcgc cgcatgaccg
     2161 ccggtatcgc cttcagcggc ctggcctgga tcgtgatcgg tggcatccag gtggtgatgg
     2221 acggcggcaa tgccatgtcg atcttctggc agatcctgcc gtacgcgctg ctgaccttcg
     2281 gtgaggtcct ggtctcggcc accggcctgg agttcgccta cagccaggcc ccgcaggcga
     2341 tgaagggcgt ggtgatgagc ttctggaacc tgaccaccac catcggcaac ctgtgggtgc
     2401 tgctgtccaa cgcagcggtg cgcaacgata cggtgaccca ccagatcgcc ggcaccggcc
     2461 tgagcgaggc ggcgttcctg atgttcttct tcgccggctt cgccttcatc gcggcgttgg
     2521 cctttggttg gtacgcgaaa cgctatcgta tggtcgacaa ctaccgtagc gcctgagcct
     2581 gacatgaccc ccgtcaatct gctgttgatc gccatcaccg ccatcctgtc gtggatggcg
     2641 ttcaacaacc gcaagctggc cgaccgcctg atcctgtggc cgcccgccgt ggaccgccat
     2701 cgccagtacg accggctggt gacctatggc ttcatccacg ccgactggtc gcacctgatc
     2761 ttcaacatga tcaccctgtt cttcttcggg ggattcatcg agagcgtgat ggtggagctg
     2821 accggcagct acctgaccta tccggcgttc tatatcggcg cgctgctggt ctcgatcctg
     2881 cccagctacc tgaagaacca gaagaacccg aactacctca gcctcggtgc atccggggcg
     2941 gtgtcggcgg tgctgttcgc cttcatcctg atcaagccgt ggtcgatcat cctggtgttc
     3001 ttcatcccgg cgccggccat catctatgcc gcgttctacg tcggctacag catctggatg
     3061 gacaagcgcg gcggtgatcg catcaaccac agcgcacacc tggccggtgc ggcgtttggc
     3121 gtgatcttca tgctggccat gcagccgagc atcttcaacc acttcctgcg cgaactctcc
     3181 aacccgacct tccgcctcgg cggcggttga gggtgggaac ggggcggatc ggcagcgatc
     3241 cgccccggcc ggttcaggcc gtggtctgct gcccgtaggt gtccagcagg cgggcgaaca
     3301 cttcctcgcc gatgcgctgg aaatcctggt cttcggtctg cccttccact gccagctgca
     3361 gcaggccctc cagcagggca cggtcggtat cggaatgggg atcgctgggg tgcatcgggg
     3421 cctccgcggt gatgcgcatg gtctacggtc gcaagggccg tgccagcctg gccgtacccc
     3481 tccacaggcg atagcggccg cccgccctcc agcttgaggg tcgaaaactg acgtgaatgg
     3541 accgcacttg cccctgttca ggcttcacgc gatcatggcg cccggctgcg caccatccac
     3601 gcagtcgccg caggagacag ttccatggct tcggtcacgc cccccggtct ggcctacgag
     3661 gtcgaacacg acctggccag ccatcgcttc accgcccgtg tccgaggaca actggcggtg
     3721 cttgattacc agatcaagcg caggcgcatg gtcatcaccc acaccgaagt gcccgagccg
     3781 attgccggcc gcggtattgc cggtgagctg acccgcgtcg cgctgcgctt cgcccgcgag
     3841 cagaaataca aggtggtgcc ggcgtgttcg tatgccgagg ccttcctgca gcggcacgag
     3901 gagtatcacg acctgctcgt cggctgatgc cggcgggcca cgcttcagcc atggcaggcg
     3961 atgatgtaca aacatgaaca ggggatcccg atgaagattg gaaacaaccg gccattgcgc
     4021 ggcagcgtgc tggccggcgt ggtgggcgtg ctgttgctgg ccggttgcca gcgtgagagc
     4081 gagccggcac cggcgaccga cgcggccccc gccgccgagg ccccggtcgc gggcgagaca
     4141 cccgccacgg aagcgccgct ggatctgcgc gacgtgatcg agaacaacga gcgcgaagtg
     4201 gtgggcatca gctacccggc cggcatcgac cgttatccgg gcctggcacg cgcgctgcag
     4261 gactatgcga ccagcgcccg cagcgacctg cagcaggcac tggacgggct cggcaacgac
     4321 aagccgacca tgccctacga gctgtcgctg agcttcgaga aggtgctgga aaccccgcag
     4381 ctggtggtgg tcagtgccga tggcagccgc tataccggag gcgcccacgg tgagccactg
     4441 gtagcccgct tcgtgtggct gccgcagcac cagcagatgc ttagcgccga aaagctggtg
     4501 gccgatgcca agggctggaa ggcgatcagc gatttcgtcg ccgaccagct gcgcgagcgc
     4561 gtggccaccc gcctcagcgg cgaggacatg gacccggccc agctgcagga atcgctgcgc
     4621 aacgcatcgc gcatgattgc cgacggtacc ggcccgcagg ccgacaattt cagccagttc
     4681 cagccgctga ccgacgacaa ggggcagatc accgcgctgc gctttgtttt cccgccgtac
     4741 caggtgggtc catactcgga cggcacgcag accgccgatg taccggcggc ggtgctgttg
     4801 ccgcacgtgg ccaaggacta cgtggagctg ttcgcacgcg gttgaccgca gtcgaggagg
     4861 tggcgtggat acagggttgc aggagcgggt cgccggcctg ctgcaggaag ccggggtccg
     4921 catcggcggc acccagccac aggacatcca ggtgcatgat ccgcgcttct tcgcgcgggt
     4981 catggcgcac ggctcgctcg gcctcggcga gagctacatg gacggctggt gggatgccaa
     5041 cgtcctggac gacttcctcg tccatctgat gcaggcgcac ctggacgaac gggtgcatgg
     5101 ctggcgcgaa gtggccgatg cgctgaaggc gcgcctgttc aacctgcagg ccgggcaggg
     5161 cagctacgag gtcggccgcc gccattacga cctcggcaat gacctgtacc aggccatgct
     5221 cggaacgcgc ctggtctaca gctgcggcta ctggcgcact gccgatgatc ttgacgccgc
     5281 gcaggaggcc aagctcgacc tggtctgccg caagctgggc ctgcgtccgg gccagcgcgt
     5341 gctggacatc ggctgcggtt ggggcgaggc actgaagttc gctgccgagc gctacggtgt
     5401 cagcggcgtc ggcgtgacca tctccaggga gcaggccgag ttcgcccgtg agttgtgcgc
     5461 cgggctgccg atcgagatcc gcctgcagga ctaccgcgaa ctggacgagc cgttcgatgc
     5521 gatcttctcg atcggcatgt tcgagcacgt cggtgacaag aattattcca gtttcttcga
     5581 ggtggccagg cgctgcctgt cgccacgcgg gttgctgttg ctgcatacca tcggcaccaa
     5641 catctcgcgg caccgcaccg atccatggat cgcgcgctac atcttcccga actcgatgct
     5701 gccgtcggcg gtgcagatca gcaaggcatt cgaaggacgc ttcgtgctgg aggactggca
     5761 caacttcggc accgattacg acctgaccct gcaggcgtgg cggcgcaacg tggaagcggc
     5821 ctggccgcga ctggatgcgc gctatgacga gcacttccgg cgcatgtggc gtttctacct
     5881 ggccgggtcg atggcgactt tccgctgccg gcacgcgcag ctgtggcagc tggtgctgtc
     5941 gccggaaggc gtgccgggcg ggtacgtcgc gccgcgttga tgtgcaggga gatcgacgca
     6001 aggcgtcgat ctgccgcggg cgtgaagtga ggggcagtcg atgacgtttt tggcctcatc
     6061 gcaacgcgac ctcgaagccg acagtcacgt cgagaccgct gctggcggcg tgatgccgcc
     6121 tgattgcata ggaccaggtt gaattatccg acgctggcga agcgaagcca acgtctcatg
     6181 cttgaattcg cctcggcatc acgccggtgt cgtcttctgg attcatgggg ttcaaccaat
     6241 gcagcgaatt tcaacggggc tgaagaccct gatggtctca acggtcgtcg ttgcctcggc
     6301 agcgttcatt gatccggccc aggccttcga cgggttcgtc aactacacgc cggaatttgg
     6361 cgggcgcgtt gcgtgctccg gtaccgcttc ggttgcgtgc ttccgctggg atatctcttc
     6421 ggccgtgaat gacgacatgg tcatgacccg ccagtggatg gatcgtggcg aggtcatctc
     6481 cggcatcgtc acgggaagcc ccgaaggcag cagtgagctg ttgctgaccg gccacgggga
     6541 gaattggcag gcgccgatca tctatgcacg atatggtgct gcagcgagtg agctggacca
     6601 cgattgcgcc gcgcctctga ctgacgggtg cgcgatgccg ttgattgagg gcgaacagat
     6661 ccattattcg atcaaggtgc gcgtagtcgg taccgagctg gttcacttct acgctttggg
     6721 cttgtaaccc ccggagcagg ccattccctc gttcgatgcc tcggtgaggg ctgcgataaa
     6781 gcaaaaaaaa accgcccggt ctcccgggcg gttttcgttt cacgctagcg cacgggcgat
     6841 cagttgccgg cgccggtcag gccacgcttt tccagcagcg gttcgatctg cggctcgtgg
     6901 ccggcgaaat cgcggaacag ctgcatcgcg tcgacgctgc cgcccttgga cagcagcgtg
     6961 gcgcggaagt ggtcgccgtt cttgcggctc aggccgccgt tgtccttgaa ccacttctgg
     7021 gtgttggcat cgagcacttc cgaccagatg taggcgtagt agccggccga gtagccaccc
     7081 atgatgtggc tgaagtacgg ggtcttgtag cgcggcggaa ccggcgcgta gtagatgccg
     7141 tccttctcca gcgcagcgcg ctcgaaggcc atcacgtcct tggcggccgg cacctggtcg
     7201 gcgccgatct ggtgccagcg ctggtcaagc attgccgcac ccaggtactc ggtggtggca
     7261 aagccctggt tgaacttggc cgcagccagc accttgtcca gcagtgcctg cggcatcgcc
     7321 gaaccgttct ggtagtgctt ggcgtagttc ttcaggatgg ccgggttgtc cgaccacatc
     7381 tcgttgacct gcgaggggaa ctcgacgaag tcgcgcggta ccgaggtgcc cgagaagtac
     7441 gggtacttca cgttggagaa catgccgtgc agcgcgtggc cgaactcgtg gaaggtggtg
     7501 ttcacctcat cccaggtcag cagggtcggc tggccggccg gcggcttcgg gatgttcagg
     7561 tggttggcca ccaccggctt gaaaccggtc agcttggact gcgaaacgta ggagttcatc
     7621 cacgcaccgc cacgcttgga ggcgcgcgca tacggatcga agatgaagat cgccagctgg
     7681 ctgccgtcgg cgtcgaacac gtcgtagacg gtgacgtcat cgtggtagac cggcaggtcg
     7741 gtacgctgct tgaaggtcag gccgaattcc tggccggcag catagaacac gccgttctcc
     7801 agcacgttct tcatttcgaa gtacggcttc agctgcgact cgtcgaagtt gtacttggcc
     7861 tggcgcacct tctcgctgta gaaggcccag tcccacggtt cgagggcgaa ggtcttcttg
     7921 ccggcggcct tctgttcctg gtcgatcatc gcctgcaggt cggccgcttc gcgcttggcg
     7981 ttggccacgg cagccggggc cagcttgccc agcatcgcgt tgaccgcttc gggggtcttg
     8041 gcggtctggt tggtcaggtt gtaagcggcg aagttcgcaa agcccatcag cttggccttg
     8101 tcggcacgca gctgcatgat gcgcgagacc agtgcggtgt tgtcgaactc gccaccgcgg
     8161 ctgccacggc tgaccgaggc ttcgtagatc ttctggcgca gggcgcggtt ggccaggttg
     8221 gtcagcggcg gctggccggt ggtgttgagc agggtgatca cgtacttgcc ttccaggcca
     8281 cgggccttgg cggcttcggc ggcggcagcg atctgctcct tggacaggcc ggccagctcc
     8341 ttgacgtcgt cgacggtgat cgccgaagcg ttcacttccg actgcacgtt ctggctgaac
     8401 ttggtgccca ggttggccag ctcggcgttc atcgccttca gcgtggcctt gtcggcctcg
     8461 gaaagcttgg cgccggcgcg cacgtagttg tcgtagtact tctcgaccag gcgcacgcct
     8521 tcggcgtcca ggccaagctg gctgcgggtg tcatacagcg cctggatgcg cgcgaacagc
     8581 ttgccgttca gcgcgatcgc atcgctgtgc gcggcgaact tcgccgagta gtcggcctgc
     8641 agcttcttgc gggtgtcgtt ggtgtcggcg ccgaccaggc tgaagaacac ggtggtcgca
     8701 cgatcgagga tgtcaccgct cttttccagg gcgatgatgg tgttgtcgaa ggtcggcttt
     8761 gccttgttgt tggcgatcac ctccacttcc ttcagctgct gcgccatgcc ggcgtcgaat
     8821 gccggggcga agtcgctgtc cttgatcctg tcgaactgcg ggaagtgcag cggcagcggg
     8881 ctatcggcga agaacggatt ggcctgctgg gcggtggtgc tggcggccgc ggtggcggcg
     8941 ccggccgagt aagcgggcag ggcaaggccg agggtcatgg ccacggcaag ggcaaggcga
     9001 gtggtcaagg taatagctcc ggtaaggcaa acaagggccc gagggtaacc cggccggccg
     9061 cacccgcact tgtgtcaaaa ggcatgttgg caatgcgaag aatctgcaga gccaccccat
     9121 ggctgcctgc gccggtacca tggcctgtag accccaccgc cacggcccgc cgtcatgacc
     9181 accacctacg atttcagctt ccgtgacctc gatggccagc cgcaggcgct ggcgcagttc
     9241 cagggccgtc cgctgctgct ggtcaacgtc gccagccgtt gcggtttcac cccgcagtac
     9301 accgggctgg agcagctgtg gcaggactac cgcgagcgcg gcctggtggt gatcggcttt
     9361 ccgtgcaacc agttcggcgc gcaggagccg ggtgatgccg cgcagatccg ccagttctgt
     9421 tcgctggact atccggtcag cttccccttg tcggagaaga tcgaggtcaa cggcagcggc
     9481 gccgatcccc tgtgggcatg gctgtcacgc gagaagcgcg gcctgctggg cattgcccgc
     9541 atcaaatgga acttcagcaa gttcctggtc gatcgcaagg gaagggtggt gtcgcggcat
     9601 gcgccgacca ccacgccgga gcagctgcgc agcgcaatcg aagcact
//
LOCUS       DAOKIP010000158         9462 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.158,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000158 DAOKIP010000000
VERSION     DAOKIP010000158.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 9462)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9462)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9462
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.158"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(2..493)
                     /locus_tag="QEL58_003028"
     CDS             complement(2..493)
                     /locus_tag="QEL58_003028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010483124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor"
                     /protein_id="HDS1677472.1"
                     /translation="MPAKTATACTAPHHHVHDASDFVAVVERVSRERGLRLTPIRANV
                     LKLIAEAGKPVKAYELLEWVRNGKGVGADAPPTVYRALDFLMANGFVHKLESVNAFVA
                     CHHPSSAAHSVPFLICNSCHSAVELEDREIVTQLEKRAKELGFQPQAQTLEVHGLCAR
                     CAG"
     gene            complement(528..1931)
                     /gene="gltX"
                     /locus_tag="QEL58_003029"
     CDS             complement(528..1931)
                     /gene="gltX"
                     /locus_tag="QEL58_003029"
                     /EC_number="6.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019237481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HDS1677473.1"
                     /translation="MICRTRFAPSPTGYLHIGGARTALYCWLEARHRGGEFVLRIEDT
                     DRERSTQGAIDAILEAMEWLGLDYDEGPIYQTERVARYQEVAEQLIANGKAYYAYETR
                     EELDAMREAAMARQEKPRYNGAARELGLPYKDDPNRVIRFKNPLEGTVVFDDLIKGRI
                     EIANSELDDMVIFRPDGYPTYNFAVVVDDWDMGITEVIRGDDHINNTPRQINLYEGIG
                     APVPKFGHMPMILDEQGAKLSKRTGAADVMQYKDAGYLPDALLSYLARLGWSHGDQEL
                     FSRQELIELFDVKDCNSKASRLDMAKLGWVNQHFLKTEDVAAIVPHLVYQLQKLGLDV
                     AAGPAPEDVVIALRERVQTLKEMAEKAVVWYQPLAEYDEAAVAKHFKAGAEVALGKAR
                     ELLAALPEWTAESVGVALHDVAAALDIGMGKVAQPLRVAITGTQVSPDISHTVYLAGR
                     EQALKRIDVAITKVATA"
     gene            complement(2085..3641)
                     /locus_tag="QEL58_003030"
     CDS             complement(2085..3641)
                     /locus_tag="QEL58_003030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014161250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HDS1677474.1"
                     /translation="MGGNAGAQQRETVDLDMVSRIRQEAFHRSQVMDTFSYLTERIGP
                     RLTNSPAMGRANAWTRGKFNEWKLDNVHDEAFDDFGRGWEFTSASVEMLGDRIQPLHA
                     LPKAWTPGTNGPVEGELVQVEIKKPEDIEKYRGKLRGRILLLGEAREYKRGTEADSHR
                     HDATSLEGLQEFTLPKDQDATAERAKRVKEYQERQALASKVNAFFVEEGALASISISS
                     WDNGIIRVAGGGSRKAGESVGIPELAMISEHFNPLVRALKAKQTVRLRVDVAARFTDE
                     ADQPGYNTLAEIRGSSKPDEVVMIGAHMDSWHSGTGAADNAAGVAVMMEAMRILKATG
                     AKPKRTIRVALWSGEEQGLIGSQAYVAKHFGQFPEPTDPAQKALPASLREPTGALRKT
                     RDYSKFQVYFNMDNGSGRFRGIYAQENLAAMPIFEAWLAPFHDVGATTVATRNTGSTD
                     HISFDRIGLPGFQFIQDRLDYFSNVHHSHLDTWDHAEPEDLKQAAAIVASFAYNAAMR
                     EQPFPRKAEP"
     gene            complement(3843..4253)
                     /locus_tag="QEL58_003031"
     CDS             complement(3843..4253)
                     /locus_tag="QEL58_003031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005408687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677475.1"
                     /translation="MGWRHGLRQRARQGIPALLEVDALLQAHGVLAALPGARIAPGLV
                     RFQLAAVTCEGLQGQGLDWLQGARQGRGALAGRVPRYRPWKAGAEALAEIGIGGLPED
                     WPAHAAVYGCSSIDRRHWLLLLPARAQLWLGWSG"
     gene            complement(4264..5583)
                     /gene="creD"
                     /locus_tag="QEL58_003032"
     CDS             complement(4264..5583)
                     /gene="creD"
                     /locus_tag="QEL58_003032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005929861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell envelope integrity protein CreD"
                     /protein_id="HDS1677476.1"
                     /translation="MKSLKMLLRFAIVGGLILLLLVPLMMIRGVITERSAYRDEAFSR
                     VADSRAGVQRLVGPVRVVPWVERQQVEVVDAKGNKKTEVQVSEGHWLQMPATLEVGGE
                     MLPSQREVGLFKVPVYSWNGQLKATFAVDDYPVKAGRSYGQPYVALGVSDVRGLVGTP
                     NLRVDGKQLRLLPGVEAASEVGRGLHAPVAGFASDQGGSLAASTVELELRLDGSRMLS
                     VVPVGDDTRIALRSSWPHPSFSGAFLPNERRVNAQGFDARWAVSSLASDAQRQLRSDG
                     AIDSQAVTVSLVDPVDTYTQADRASKYGVLFVLLTFVGFILFELIKSLRIHPLQYLMV
                     GLALAIFFLLLISLSEHIAFWKAYLVSAVACIGLQAVYLANVLGHWKRGLGFAALLTV
                     LYGALYGLLVSENNALLMGSLLLFVILALAMWVTRRVDWYALGAELK"
     gene            complement(5665..7131)
                     /gene="creC"
                     /locus_tag="QEL58_003033"
     CDS             complement(5665..7131)
                     /gene="creC"
                     /locus_tag="QEL58_003033"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019338443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     CreC"
                     /protein_id="HDS1677477.1"
                     /translation="MRLVLKLFLGFFLITGIAAFFVMRVFVNEVKPGVRQAMESTLVD
                     AANVLAEMAAADVKAGTIRSGGFTRNLAKARQRDLKAMVWRFPKRSLDYRVTITDARG
                     IVIYDSLGRDLGRDNSRWNDVYRTLRGEYGARSSPEVPGEEGDTVMHVAAPVYDPADG
                     RTLIGVLSLAQPNRSIDPFIAASQRAIIERGAWLIGLSALVGVLVTMWLTTGLGQLSR
                     YARAVTAGEPVPPPRRRRDEIGDLGQALETMRRKLEGKAYVEQYVQSLTHEMKSPLAA
                     IRGAAELLQEPLPEADRVHFARSIVDQQERLTETIDKLLALAEVEQHGWLQTRDPIAL
                     PVLLAEAAAAAQVRAQAAGVQVRIGSAPDLSVQGDAYLLRQALHNLIDNAIAFSPAGA
                     EIALQAEVDGQGVRLQVADRGAGIPDYARDRVFERFYSLARPASGRRSSGLGLPFVQE
                     VARLHDGRASVEARDGGGTVASLWLPLSVPGQRPRPRR"
     gene            complement(7135..7860)
                     /gene="creB"
                     /locus_tag="QEL58_003034"
     CDS             complement(7135..7860)
                     /gene="creB"
                     /locus_tag="QEL58_003034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator CreB"
                     /protein_id="HDS1677478.1"
                     /translation="MLRAMTVPVAHVLVVEDEAAIAETVLYALRSEGYAASHCLLGGE
                     ALQRLQAGGIDLLVLDVGLPDLGGFEVCRRLRAQPGPAAQLPVIFLTARNDEVDRVLG
                     LELGADDYMTKPFSPRELVARVRARLRRAAPLAAAGSADAGWQQHGAFAIDREGRRIR
                     FRGQALDLTRYEYALLEALLQRPGAILSRAQLMDRGWDSSADSADRTVDTHVKTLRGK
                     LRAAGASEDPIRTHRGLGYALEV"
     gene            7896..8753
                     /locus_tag="QEL58_003035"
     CDS             7896..8753
                     /locus_tag="QEL58_003035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004150342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2030)-N(6))-methyltransferase
                     RlmJ"
                     /protein_id="HDS1677479.1"
                     /translation="MNYRHAFHAGNHADVLKHIVQLALIDSFKRKDSPFFVLDTHGGA
                     GRYLLASEESRKTLEAESGIMRLMAQPKLPEVVERYLKAVQADNPVGALTNYPGSPLL
                     SAQAMRAQDRMAVCELQEPETATLKALFAHDSRVDVRPGDGYALLRSLLPPKFNGSKI
                     GRGLVLIDPPYEAQDAEYQNILAALAETLARWPQATCAVWFPIKQRRTILHFLRKASA
                     LPVKSAMTIEFLVRPDDSPLRLNGSGMLLLNPPWQFDRVVGPALPALRQHLGEPGAST
                     RLDWLKAPE"
     gene            8849..9394
                     /locus_tag="QEL58_003036"
     CDS             8849..9394
                     /locus_tag="QEL58_003036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004150340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HDS1677480.1"
                     /translation="MATRNRMPPWHEIFKAPSGHELLIRPIRPEDGAPLQAAFSLFGP
                     EEIRDRFLQAVTELSPETTQRLTHPNPKTEITLVAAESLPAGEAVVGAVARASIIPGT
                     REAEYAILISRFLIGQGLGRQLMRKLVKWGRGKYLDRLYGDVAAENEPMKQLAASLGF
                     KPVPHPTGAEGLVRMVLELDN"
BASE COUNT         1490 a         3312 c         3111 g         1549 t
ORIGIN      
        1 gttacccggc gcagcgggcg cagagcccgt gcacttccag ggtctgtgcc tgcggctgga
       61 agcccagctc cttggcgcgc ttttccagct gggtgacgat ctcgcggtct tccagttcca
      121 ccgcgctgtg gcagctgttg cagatcagga acggcaccga gtgcgccgcg ctgctggggt
      181 gatggcaggc cacgaaggca ttcaccgatt ccagcttgtg cacgaagccg ttggccatca
      241 ggaagtccag cgcacggtac acggtgggcg gggcatcggc gcccacgccc ttgccgttgc
      301 gcacccattc cagcagctcg taggccttga ccggcttgcc ggcctcggcg atcagcttca
      361 gtacgttggc gcggatcggg gtcaggcgca gcccgcgttc gcgcgagaca cgctcgacca
      421 ccgccacgaa atccgatgcg tcgtggacgt ggtggtgcgg ggcggtacag gcagtggcgg
      481 tcttggcggg catgcgtgtt ctccggttcg ggcctggcaa ggatgcctca ggccgttgct
      541 accttggtga tggccacatc aatgcgtttc aaggcctgtt cgcggccggc caggtacacg
      601 gtatgggaaa tgtcaggact gacctgggtg ccggtgatgg ccacgcgcag cggctgggcg
      661 accttgccca tgccgatgtc cagcgcggcg gccacgtcgt gcagggccac gcccaccgac
      721 tcggcggtcc actccggcag cgccgccagc agctcgcggg ccttgcccag cgccacctcg
      781 gcaccggcct tgaagtgctt ggccaccgcc gcttcgtcgt actcggccag cggctggtac
      841 cagaccacgg ccttctcggc catttccttc agggtctgca cgcgttcacg cagcgcgatc
      901 accacgtcct ccggggcggg gccggcggcc acgtccaggc ccagcttctg cagctggtag
      961 accaggtgcg gcacgatggc agccacatcc tcggtcttca ggaagtgctg gttgacccaa
     1021 cccagcttgg ccatgtccag gcgcgaggcc ttggaattgc agtccttcac gtcgaacagc
     1081 tcgatcagtt cctggcggct gaacagctcc tggtcaccgt gcgaccagcc caggcgggcc
     1141 aggtagctca gcagcgcgtc gggcaggtag ccggcgtcct tgtactgcat cacgtcggcc
     1201 gcgccggtgc gcttggacag cttggcgccc tgctcgtcca ggatcatcgg catgtggccg
     1261 aacttcggca ccggcgcacc gatgccttcg tacaggttga tctggcgcgg ggtgttgttg
     1321 atgtggtcgt cgccgcggat gacctcggtg atgcccatgt cccagtcgtc caccaccact
     1381 gcgaagttgt aggtggggta gccgtccggg cggaagatga ccatgtcatc cagctcgctg
     1441 ttggcgatct cgatgcggcc cttgatcagg tcgtcgaaca ccaccgtgcc ttccagcggg
     1501 ttcttgaagc ggatgacgcg gttcgggtcg tccttgtacg gcaggcccag ctcgcgcgcg
     1561 gcgccgttgt agcgcggctt ttcctgccgg gccatggcgg cttcgcgcat cgcgtccagc
     1621 tcttcgcggg tttcgtaggc gtagtacgcc ttgccgttgg cgatcagctg ctcggccact
     1681 tcctggtaac gggcgacgcg ctcggtctgg tagatcgggc cctcgtcgta atccaggccc
     1741 agccactcca tcgcctccag gatggcgtcg atcgcgccct gggtgctgcg ttcacggtcg
     1801 gtgtcctcga tgcgcagcac gaactcgccg ccgcggtggc gggcctccag ccagcagtac
     1861 agcgcggtgc gggcaccgcc gatgtgcagg taaccggtgg ggctgggggc gaagcgggtg
     1921 cggcagatca tgaggcgctc ggggaacggg aatcccccga ttttaccagc ccaccgcccc
     1981 cgacggaaaa aggggacgga ggggattaag tcgcgattgc cgagccgatg cggctacgga
     2041 cgggaagcgg aggggagaaa cgacttaatc ccctccgtcc ccttttatgg ttcagccttg
     2101 cgcgggaacg gctgctcgcg catggcggcg ttgtaggcga acgaggcgac gatggccgcg
     2161 gcctgcttca gatcttccgg ctcggcgtgg tcccaggtgt ccaggtggct gtggtggacg
     2221 ttgctgaagt agtccagacg gtcctggatg aactggaagc ccggcaggcc gatgcggtcg
     2281 aagctgatgt ggtcggtgct gccggtgttg cgggtggcca cggtggtggc gcccacgtca
     2341 tggaacggcg ccagccaggc ttcgaagatc ggcatcgccg ccaggttttc ctgggcgtag
     2401 atgccacgga agcggcccga gccgttgtcc atgttgaagt acacctggaa cttgctgtag
     2461 tcgcgcgtct tgcgcagcgc accggtcggc tcgcgcagcg aggccggcaa tgccttctgc
     2521 gccgggtcgg tgggttccgg gaactggccg aagtgcttgg cgacataggc ctgcgagccg
     2581 atcaggccct gctcctcgcc actccacagc gccacgcgga tggtccgctt cggcttggca
     2641 ccggtggcct tgaggatacg catggcctcc atcatcaccg ccacgccggc ggcgttgtcg
     2701 gccgcgccgg tgccgctgtg ccacgaatcc atatgcgcgc cgatcatcac cacctcatcg
     2761 ggcttgctgc tgccgcggat ctcggccagc gtgttgtaac cgggctggtc ggcttcgtca
     2821 gtgaaacgcg cggccacgtc cacgcgcagg cgcacggtct gcttggcctt cagcgcgcgc
     2881 accagcgggt tgaagtgttc gctgatcatc gccagctcgg ggatgcccac cgattcaccg
     2941 gccttgcgcg aaccacctcc ggcaacacgg atgatgccgt tgtcccagct gctgatgctg
     3001 atcgaggcca gcgcgccctc ttcgacgaag aacgcattga ccttgctcgc cagcgcctgg
     3061 cgctcctggt attccttgac ccgcttggcg cgctcggcgg tggcgtcctg gtccttgggc
     3121 agggtgaatt cctgcaggcc ttccagcgag gtggcgtcgt ggcgatgcga atctgcctcg
     3181 gtgccgcgct tgtactcgcg tgcttcgccc agcaacagga tcctgccgcg cagcttgccg
     3241 cggtacttct cgatgtcttc gggcttcttg atctcgacct gcaccagttc gccttccacc
     3301 gggccgttcg tacccggcgt ccaggccttg ggcagcgcat gcagcggttg gatgcggtcg
     3361 cccagcattt ccacgctggc cgaggtgaac tcccagccac ggccgaaatc atcgaaggct
     3421 tcgtcgtgga cgttgtccag cttccattcg ttgaacttgc cacgggtcca ggcgttggcg
     3481 cggcccatcg ccggggaatt ggtcaggcgc gggccgatgc gctcggtgag gtagctgaag
     3541 gtgtccatca cctgcgaacg atggaaggcc tcctggcgga tgcggctgac catgtccagg
     3601 tccaccgtct cgcgctgctg cgcccctgca ttgcccccca tcgccagcgc taccgccagc
     3661 acaccccact tcagcccgct ccacttcaac acgccgcacc cctgcccttc ggctcgatca
     3721 tcaacctgtc gagtctagcc agcaggggcg cgccgatacc gtcccatcgg tcatgggcgg
     3781 gagcgtgcga accaaggttc gcacccacag gagagtggtt ggttcgcacc tgccaagcca
     3841 cctcacccac tccagcccag ccacagctgc gcccgcgccg gcagcagcag caaccagtgc
     3901 cgccggtcga tgctgctgca gccgtacacc gccgcatgtg ccggccagtc ctccggcagg
     3961 ccgccgatgc cgatctcggc cagcgcctcc gctccggcct tccatggccg gtagcgtggc
     4021 accctgcccg ccagcgcgcc gcgtccctgc cgcgcaccct gcaaccagtc caatccctgg
     4081 ccctgcaatc cctcgcaggt gaccgcggcc agctggaagc ggaccaggcc gggggcgatc
     4141 cgtgcccccg gcagggccgc cagcacacca tgtgcctgca gcagtgcatc cacttccagc
     4201 agggccggaa tgccctgccg tgcccgttgc cgcaatccgt ggcgccagcc catggcgtcc
     4261 tccttacttc agttccgcgc caagcgcgta ccagtcgacc cggcgggtca cccacatcgc
     4321 cagcgccagg atcacgaaca gcagcagcga gcccatcagc agcgcgttgt tctccgacac
     4381 cagcagccca tacagcgcgc cgtacaacac ggtcagcagc gcggcaaagc cgaggccacg
     4441 cttccagtgg cccagcacgt tggccaggta caccgcctgc agcccgatgc aggccacggc
     4501 cgagaccagg taggccttcc agaacgcgat gtgctcggac aggctgatca gcagcaggaa
     4561 gaagatcgcc agcgccaggc ccaccatcag gtactgcagc ggatggatgc gcagcgactt
     4621 gatcagttcg aacaggatga agccgacgaa ggtgagcagc acgaacagca cgccgtactt
     4681 ggaagcgcgg tcggcctggg tataggtatc gaccggatcg accagcgaca cggtcaccgc
     4741 ctgcgaatcg atcgcgccgt cgctgcgcag ctggcgctgc gcgtcggacg ccagcgagga
     4801 caccgcccag cgtgcatcga agccctgcgc attgacgcgt cgctcgttgg gaaggaatgc
     4861 accactgaac gacggatgcg gccagctcga acgcagcgcg atgcgggtgt catcgcccac
     4921 cggcaccacc gacaacatgc ggctgccgtc caggcgcagt tccagttcga cggtactggc
     4981 ggccaggctg ccgccctggt cgctggcgaa cccggccacg ggagcatgca ggccgcgacc
     5041 gacttcgctg gccgcttcga cgcctggcag cagccgcagc tgctttccgt ccacgcgcag
     5101 gttgggcgta ccgaccagcc cgcgcacgtc ggagacgccc agcgccacat acggctgtcc
     5161 gtagctgcgg cctgccttca ccgggtagtc gtcgacggcg aacgttgcct tcagctggcc
     5221 gttccagctg tacaccggca ccttgaacag gccgacctcg cgctggctcg gcagcatctc
     5281 accgcccact tccagcgtgg ccggcatctg cagccagtgg ccttcgctga cctgcacctc
     5341 ggtcttcttg ttgcccttgg cgtcgaccac ctcgacctgc tggcgctcga cccacggcac
     5401 cacccgcacc ggcccgacca ggcgctggac cccggcgcgg ctgtcggcaa cccgcgagaa
     5461 cgcctcgtcg cggtatgcgc tgcgctcggt aatgacccct cggatcatca tcagtggaac
     5521 cagcagcagc aggatcagcc cgccgacaat ggcgaaccgc agcagcattt tcagggattt
     5581 catggtccat cctcgttgga gagggctgca ggatggaccg ctgcggtgag cagggtttgt
     5641 ggcgaatttg aagcgagtgt gaagtcagcg gcgcgggcgc gggcgctggc ccggcacgct
     5701 caacggcaac cacaggctgg ccacggtgcc gccgccgtca cgggcctcga cgctggcacg
     5761 gccgtcatgc aggcgcgcga cctcctgcac gaatggcagg cccagaccgg aactgcgccg
     5821 tccactagcg gggcgcgcca gcgaatagaa gcgctcgaat acccgatcgc gcgcatagtc
     5881 cggaatgccc gccccccggt cggccacctg caggcgcacg ccctgcccgt ccacctcggc
     5941 ctgcaacgcg atctccgcac cggctggtga gaatgcgatg gcattgtcga tcaggttgtg
     6001 cagcgcctgc cgcagcaggt aggcatcgcc ctgcacggac aggtcgggcg cgctgccgat
     6061 gcgcacctgt acgcccgccg cctgcgcgcg cacctgcgcc gcagccgccg cctcggccag
     6121 cagcaccggc aacgcgatcg ggtcgcgggt ctgcagccag ccatgctgct ccacttcggc
     6181 cagcgccagc agcttgtcga tggtctcggt cagccgttcc tgctggtcga cgatgctgcg
     6241 cgcgaaatgc acgcggtcgg cctcgggtag cggctcctgc agcagctcgg cggcaccgcg
     6301 gatcgccgcc agcgggctct tcatctcgtg cgtcagtgac tgcacgtact gttcgacgta
     6361 ggccttgcct tccagcttgc ggcgcatggt ttccagcgcc tggccgagat cgccgatctc
     6421 gtcgcggcgg cggcgcggcg gcggtaccgg ttcgccggcg gtgaccgcgc gggcatagcg
     6481 gctgagctgg cccaggccgg tggtcagcca catcgtcacc agtacgccga ccagcgccga
     6541 cagcccgatc agccaggccc cgcgctcgat gatggcgcgc tggctggcgg cgatgaacgg
     6601 atcgatgctg cggttgggct gggccaggct gagcacgccg atcagcgtgc gtccgtcggc
     6661 cgggtcatat accggcgccg ccacgtgcat caccgtatcg ccttcctcgc ccggcacttc
     6721 cgggctggaa cgggcgccgt actcgccgcg cagggtgcgg tagacatcgt tccagcgcga
     6781 gttgtcgcgg cccaggtcgc ggcccagcga gtcgtagatg acgatgcccc gggcatcggt
     6841 gatggtcacc cggtagtcca gcgagcgctt cgggaagcgc cacaccatcg ccttcaggtc
     6901 gcgctggcgt gccttggcca ggttgcgggt gaagccgccg ctgcggatgg tgccggcctt
     6961 gacgtcggcg gccgccattt cagccagcac gttcgccgca tcgaccaggg tcgactccat
     7021 cgcctggcgc acaccgggtt tcacttcgtt gacgaacacc cgcatcacga agaaggcggc
     7081 gatgccggta atcaggaaga agcccaggaa cagcttcagc accaggcgca tcggctagac
     7141 ctccagcgcg tagccgaggc cacggtgggt gcggatcggg tcctcgctgg caccggccgc
     7201 acgcagcttg ccgcgcagcg tctttacatg cgtatcgacg gtacggtcag cgctgtcggc
     7261 gctgctgtcc cagccgcgat ccatcagctg ggcacggctg aggatggcac ccgggcgttg
     7321 cagcagcgcc tccagcagcg cgtattcgta acgggtcagg tccagcgcct ggccgcggaa
     7381 gcggatgcgc cggccttcgc ggtcgatggc gaaggcgccg tgctgctgcc agcccgcgtc
     7441 ggcgctgccc gctgccgcca gcggtgcagc acggcgcagg cgagcacgca cccgcgccac
     7501 cagctcgcgc ggcgagaacg gcttggtcat gtaatcgtcg gcacccagct ccaggccgag
     7561 cacgcggtcg acctcgtcgt tgcgggcggt caggaagatc accggcagct gcgcagccgg
     7621 gcccggctgt gcgcgcagcc gccggcacac ctcgaagccc ccaagatccg gcaggcccac
     7681 gtccagcacc agcagatcga tgccgccggc ctgcagccgc tgcagggcct cgccgccgag
     7741 caggcagtgg ctggcggcat agccttcgct gcgcagcgca tagagcacgg tttcggcgat
     7801 ggcggcttcg tcctcgacca ccaggacatg ggcaacagga actgtcatgg cgcgcagcat
     7861 agccgctgcg gccgtcgccc cgtacactgc cgcccatgaa ctatcgccac gccttccatg
     7921 ccggcaacca cgccgatgtg ctcaagcaca tcgtgcagct ggccctgatc gacagcttca
     7981 agcgcaagga cagcccgttc ttcgtgctcg acacccacgg cggtgccggc cgctacttgc
     8041 tggccagtga agagagccgc aagaccctgg aggccgagtc cggaatcatg cggctgatgg
     8101 cccagcccaa gctgccggag gtggtcgagc gctacctgaa ggccgtgcag gccgacaacc
     8161 cggtcggcgc gctgaccaac tacccgggct cgccgctgct gagcgcacag gcgatgcgcg
     8221 cgcaggaccg catggcggtg tgtgagctgc aggaacccga aaccgccacg ctgaaggccc
     8281 tgttcgccca cgacagccgc gtcgatgtgc gtccgggcga tggctacgcg ctgctgcgct
     8341 cgctgctgcc gccgaagttc aacggcagca agatcggccg cggcctggtg ctgatcgacc
     8401 cgccctacga ggcccaggac gccgagtacc agaacatcct ggccgccctg gccgagaccc
     8461 tggcacgctg gccgcaggcc acctgcgcgg tgtggttccc gatcaagcag cgccgcacca
     8521 tcctgcactt cctgcgcaag gccagcgcgc tgccggtgaa gtcggcgatg accatcgagt
     8581 tcctggtgcg cccggatgac tcgccgctgc gcctcaacgg cagtggcatg ctgctgctca
     8641 acccgccctg gcagttcgat cgggtggtcg gcccagccct gccggcgctg cgccagcacc
     8701 tgggcgaacc cggtgccagc acccgcctgg attggctcaa agcccccgaa taacggcctt
     8761 cacgaggctg taccgccgtg agcctttcgt tcacggaatg cagccccggt gatgccacaa
     8821 tcgatggacc accaaggaat cacccggtat ggccactcgc aaccgcatgc cgccctggca
     8881 tgagatcttc aaggctccca gcggccacga gctgctgatc cgccccatcc gcccggaaga
     8941 tggcgcgccg ctgcaagcag cgttcagcct gttcgggccg gaagaaatcc gtgatcgttt
     9001 cctgcaggcg gtgaccgagc tgtcgccgga aaccacccag cgcctgaccc accccaatcc
     9061 caagaccgag atcaccctgg tcgcagccga atccctgccc gctggcgaag cggtggtcgg
     9121 cgcggtcgcc cgggcctcga tcatccccgg tacccgtgaa gccgagtacg cgatcctgat
     9181 cagccgcttc ctgatcggcc agggcctggg ccggcagctg atgcgcaagc tggtgaagtg
     9241 gggccgcggc aagtacctgg accgcctgta cggcgacgtg gccgccgaga acgagccgat
     9301 gaagcagctg gccgcctcgc tgggcttcaa gccggtgcct catcctaccg gcgccgaagg
     9361 cctggtgcgg atggtgctgg agctggacaa ctgaaggatg ggccgggcac tgcccggcac
     9421 cgcatgtttc gatagtcgag caagctcgac tctacggatg cg
//
LOCUS       DAOKIP010000159         9413 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.159,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000159 DAOKIP010000000
VERSION     DAOKIP010000159.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 9413)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9413)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9413
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.159"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(52..390)
                     /locus_tag="QEL58_003037"
     CDS             complement(52..390)
                     /locus_tag="QEL58_003037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019299887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677481.1"
                     /translation="MPAQYHISLPDPSKARGNDPDLSFHSQGAAGFAEELQDALRSGT
                     LFERWKAKQPDPDAVEPQWGVTDPDATVTGEQKDLRINLVATTRIDSDVFKQRLRLLA
                     GHHWELRDVR"
     gene            complement(468..1409)
                     /locus_tag="QEL58_003038"
     CDS             complement(468..1409)
                     /locus_tag="QEL58_003038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019336479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegV family protein"
                     /protein_id="HDS1677482.1"
                     /translation="MRIGIVVDSACDLPQDFIAAHNIVLLPITVRIGEAVLADHRDEQ
                     ATLSFLHAHVAEHGAEAETIPFSVNQIRDLFLQQLVIDYDHVFCMTITKTRSPIHDNA
                     LQASFAILNDYKPVRQAAGYNSPFALRVLDTQNLFAAQAVTAVEAVRLRDSNASVQQI
                     RERLEELAGNVHGYMVTRDLYYMRARARHKGDRSVGLLSAALGSALDIKPVLHGYRGE
                     TGPVAKIKGFDNAVQKLFAVVGQRVRAGLMTPTVCVSYGGELDELRTLPGYAPLKEVC
                     ASHGVTVYESVMSLTGMVNVGKGAVTVGFADGPHRFE"
     gene            complement(1505..2137)
                     /locus_tag="QEL58_003039"
     CDS             complement(1505..2137)
                     /locus_tag="QEL58_003039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010480859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxychromene-2-carboxylate isomerase"
                     /protein_id="HDS1677483.1"
                     /translation="MATLRWYFDFVSPYSYLHWQKLKQLPQFAQIQPVPIAFGAVLHH
                     LGNLGPAEIPAKRRFIYRQLLWTAQAEGTPLRFPPGHPFNPLSALRLCLAAGASAQAV
                     DVLFDWIWRDGNAADSADALREPAARLGIEDADRAIAEPAVKEQLRRNTEAAIAAGVF
                     GVPTLAIDDELFWGNDAHPLMAAVLADPGLLLQPEWQRLASLPVAVQRNR"
     gene            complement(2158..3441)
                     /locus_tag="QEL58_003040"
     CDS             complement(2158..3441)
                     /locus_tag="QEL58_003040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010480857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HDS1677484.1"
                     /translation="MRVLKQWLHSAAKGSRAWLGATAMVLACISASAQAQDLLVRNAT
                     VHTASARGSLQNADVLVQGGIIRAVGNGLSAPAGATVVEASGRPLTPALFGGITETGI
                     EEVLVERSTVDSALKIGEQPLRPEFDVTLAYNPASVLIPVTRLEGIGFTALGATPGGG
                     FVAGQGGVMRLDGSIDPIGPRALFLRIGAAASELTGQSRAAQWMLLQQMIDEARGQVA
                     ADSPHALLTPAGRRTLSRYLAGQGRIVVEVDRAADIRQLLRWAAREKVKIAIAGASEA
                     WQVAPELAAAHVPVFVDVLANLPASFDQIGATLENAARLQRAGVAVSFVQRGDATHNA
                     RKMRQLAGNAVAHGLPWADGLAGLTRVPAQAFGVADQIGSIEPGKRADLVLWEGDPLD
                     VAHYAEQVWLGGRAMPMRSRQTELRDRYLQRNAQP"
     gene            complement(3441..4850)
                     /locus_tag="QEL58_003041"
     CDS             complement(3441..4850)
                     /locus_tag="QEL58_003041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HDS1677485.1"
                     /translation="MASTLLRAGVALALLSLSTAPAVGASRFLADPYPSTYQAHPDAP
                     VLIQNATVLTGTGQRLDNADVLLREGRIVAVGQQLQADAGVTRIDAQGKWVTPGLIDV
                     HSHLGVYPSPGVGAHSDGNEMTAPVTANVWAEHSVWPQDPGFATALAGGVTSMQVLPG
                     SANLVGGRGVTLKNVPAVTYQAMKFPGAPWGLKMACGENPKRVYGEGKGVAPATRMGN
                     VAGYRAAFIDAADYIAKNKPKPAKRKGWFGSDKGDSAGDAGGKRDLKLDTLAGAIQGD
                     IRVHIHCYRADEMATMLDLAKEFGFKVAAFHHGVEAYKLADRLAADGVCGALWADWWG
                     FKMEAFDGIPENIALVDRPKNSCAIVHSDSPEGIQRLNQEAAKVMASARRARMPEITP
                     EHAITWMTANAAKALGIEGQTGTLEAGKMADVVVWNGNPFSSYALAEQVFIDGRRLYD
                     RSAPAATPRSDFQLGQEVR"
     gene            5010..5786
                     /locus_tag="QEL58_003042"
     CDS             5010..5786
                     /locus_tag="QEL58_003042"
                     /EC_number="3.2.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP nucleosidase"
                     /protein_id="HDS1677486.1"
                     /translation="MKSKQEIVDNWLPRYTGVPLDQFGQHILLTNFGGYLHTFSELTG
                     APVIGLDRPMASATIDGITMINFGMGSPNAAIIMDLLSAVMPKAVLFLGKCGGLKRKN
                     QLGDLVLPIAAIRGEGTSGDYLPPEVPALPAFALQRAVSTMIRDLGHDYWTGTVYTTN
                     RRVWEHDEAFKERLRAMRCMAIDMETATVFAAGFANHIPSGALLLVSDQPMIPDGVKT
                     EASDAKVSSQFVENHIQIGIEALKLIRRNGKSVRHLRFDE"
     gene            5830..6369
                     /locus_tag="QEL58_003043"
     CDS             5830..6369
                     /locus_tag="QEL58_003043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF924 family protein"
                     /protein_id="HDS1677487.1"
                     /translation="MDVAAQVVEFWKEAGPEKWFARDDAFDAQFRRLFLDEHFAAASR
                     AREHWLGSAEGALALMLLLDQFPRNCFRGTAHSYATDGLARHYAMRAIEEGLDLQLVP
                     KLRAFIYLPFEHSEDPLDQDRSVAMFDVLGDKEYLQYAELHRDIIRRFGRFPHRNAVL
                     GRIPAPEELDYLAEGGFAG"
     gene            complement(6442..7368)
                     /gene="grxD"
                     /locus_tag="QEL58_003044"
     CDS             complement(6442..7368)
                     /gene="grxD"
                     /locus_tag="QEL58_003044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005913558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Grx4 family monothiol glutaredoxin"
                     /protein_id="HDS1677488.1"
                     /translation="MSLDPALRSRIESILNDNRVVLFMKGQPSMPQCGFSAKAVGALQ
                     DLGVEFAHVNVLADQEIREGIKAYGDWPTIPQLYIDGELVGGSDIVLQMAASGELSSV
                     LGLAAPDRTPPSITVTPAAVEMLKGALADAPGAALQLTIDAGFQPNFQLAPHDEGAIA
                     AESNGLRVQFDLASARRANGITIDWVDDIRGKGLAIDNPNAPKPVQEISVRDADDLVR
                     AGNITLVDVRPADERAIAAVGVPFKSFDGNGRATLEALPKDTALAFMCHHGGRSAQAA
                     EQFRALGFTKVFNVTGGINAWSEDVDNGVPKY"
     gene            complement(7541..8158)
                     /locus_tag="QEL58_003045"
     CDS             complement(7541..8158)
                     /locus_tag="QEL58_003045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SGNH/GDSL hydrolase family protein"
                     /protein_id="HDS1677489.1"
                     /translation="MALSYLALGDSYTIGEAVAVEGRWPHQLAAALRAQGVDLADPQT
                     IATTGWTTDELDAGIDLAAPQGPFDFVSLLIGVNNQYRGRPLDEYRAQFVALLQRAIG
                     FAAGRPERVLVLSFPDWGATPFGAGSGRDLAAIEIETDEFNAAAEVISAQHNVAFVDI
                     TDISRAQGEDPAMIAEDGLHPSARMYALWSERALPVAAHLLGRAG"
     gene            complement(8162..9412)
                     /locus_tag="QEL58_003046"
     CDS             complement(8162..9412)
                     /locus_tag="QEL58_003046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006384307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HDS1677490.1"
                     /translation="MAIRERLSEVRYEIRGELARRARELEAQGRKLIKLNIGNPGAFG
                     FRAPEHLQRAIADDMGRTDPYTHQQGLPVAREAIAGYYARRGAPDAHPDRVFLGNGVS
                     ELIDLSLRALLNPGDEVLVPSPDYPLWSASTILNDGRPVYYRCAPENGFQPDPSEIET
                     LVSSRTRAIVLINPNNPSGASYPRELLERVVEIARRHNLLLLVDEIYDQILYDDAVFQ
                     PVAPLAGDHPCLTFSGLSKVHRACGWRVGWAHLSGDDARLGDFRAALDLLGALRLCAN
                     VPGQYAIEAAVNGPDTISELCTPGGRLYETRRAVIEACEASEHLSLVAPAGALYAFPA
                     VVGAAAKGFDDHNFALDLMNNEGVLVVPGSSFNVPYRHHFRVTLMPEASVMRDVFARI
                     DRVLARRAEDATKVVPLKPRRSVA"
BASE COUNT         1415 a         3186 c         3282 g         1530 t
ORIGIN      
        1 gcggttttcc cggaagcgcc aaccaaggtt ggcatctacc cggggcaggc ctcaacgcac
       61 gtcgcgcagt tcccagtgat gaccggccag caggcgcagg cgctgcttga acacgtcact
      121 gtcgatgcgg gtggtggcca ccaggttgat gcgcaggtcc ttctgctcac cggtcacggt
      181 ggcgtccggg tcggtgacgc cccactgcgg ttccaccgca tccggatcgg gctgcttggc
      241 cttccagcgc tcgaacagcg tgccgctgcg cagtgcgtcc tgcagctctt cggcgaaacc
      301 ggcggcgccc tgcgaatgga aggacaggtc agggtcgttg ccgcgggcct tggacgggtc
      361 gggcaggctg atgtggtact gcgcaggcat ggtgttctcc ttgaagtgcg gcaaggctgg
      421 cacagtcgtg gtggaatcga tgtgcagatt ccggccgtcg ccagcgctca ttcgaaccga
      481 tgcggcccat cggcaaagcc cacggtgacc gcgcccttgc cgacgttgac catgccggtc
      541 aggctcatca ccgattcgta cacggtcacg ccgtggctgg cgcagacctc tttcagcggt
      601 gcatagccgg gcagggtgcg cagctcgtcc agctcaccgc cgtagctgac acacacggtc
      661 ggcgtcatca gtccggcacg cacgcgctgg ccaaccaccg caaacagctt ctgcaccgcg
      721 ttgtcgaagc ccttgatctt ggccaccggc ccggtctcgc cgcggtagcc gtgcagcacc
      781 ggcttgatgt ccagcgcgct gcccagcgcg gcgctgagca ggccgacgct gcggtcgccc
      841 ttgtgccgcg cacgcgcgcg catgtagtac aggtcgcggg tgaccatgta gccgtgcacg
      901 ttgccggcca gttcctccag ccgctcgcgg atctgctgca cgctggcgtt gctgtcgcgc
      961 aggcgcaccg cctccaccgc ggtcaccgcc tgcgcggcga acaggttctg ggtatcgagc
     1021 acgcgcagcg cgaacggcga gttgtagccc gccgcctgcc gcaccggctt gtagtcgttg
     1081 aggatggcga agctggcctg cagcgcgttg tcgtggatcg ggctgcgggt cttggtgatg
     1141 gtcatgcaga acacgtggtc gtaatcgatc accagctgct gcaggaacag gtcacggatc
     1201 tggttgacgc tgaacgggat ggtttccgct tccgcaccat gctcggccac gtgcgcgtgc
     1261 aggaagctca gcgtggcctg ctcatcgcga tgatcggcca gcacggcttc gccgatccgt
     1321 acggtgatcg gcagcagcac gatgttgtgc gcggcaatga agtcctgcgg caggtcgcag
     1381 gccgagtcga cgacgattcc gatgcgcatc cgcggctccc cctccagggc ggttgtaggt
     1441 tcggaaacgt gaaatctatc tcaaaaccgg gcgtggcgcg cgagggaaac gcgccacgcc
     1501 ctgttcagcg gttgcgctgc accgctaccg gcaggctggc caggcgctgc cattcgggct
     1561 gcagcagcag gcctgggtcg gccagcacgg cggccatcaa cgggtgcgcg tcgttgcccc
     1621 agaacagctc gtcgtcgatg gccagggtgg ggaccccgaa cacgcccgcg gcaatcgcgg
     1681 cctcggtatt gcgccgcagc tgctccttga ccgccggctc ggcgatggca cggtcggcat
     1741 cctcgatgcc cagccgcgcg gccggctcgc gcagcgcatc ggcactgtcg gcggcgttgc
     1801 cgtcgcgcca gatccagtcg aacaacacat ccaccgcctg tgcgctggcg ccggcggcca
     1861 ggcacagccg cagcgccgac aacgggttga acggatggcc cggcgggaat cgcaggggcg
     1921 taccctcggc ctgcgcggtc cacagcagct ggcggtagat gaaacgacgc ttggcgggaa
     1981 tctcggccgg accgaggttg cccaggtgat gcagcaccgc accgaaggca atcggcaccg
     2041 gctggatctg cgcgaactgc ggcagctgct tcagcttctg ccagtgcagg taggaatacg
     2101 gcgagacgaa gtcgaagtac cagcgcagcg tggccattgg aatttcctcg tgtacggtca
     2161 gggctgcgcg ttgcgctgca ggtagcggtc gcgcagttcg gtctggcgcg agcgcatcgg
     2221 catcgcacgt ccccccagcc agacctgttc ggcatagtgc gccacgtcca gcgggtcgcc
     2281 ttcccacagc accaggtcgg cgcgcttgcc gggctcgatg ctgccgatct ggtcggccac
     2341 gccgaacgcc tgcgccggta cccgggtcag gccggccagg ccgtcggccc agggcaggcc
     2401 atgggcgacc gcattgccgg ccagctggcg catcttgcgg gcgttgtggg tggcgtcgcc
     2461 gcgctgcacg aaggagaccg ccacacccgc gcgctgcagg cgtgccgcat tctccagcgt
     2521 ggccccgatc tggtcgaagc tggccggcag gttggccagc acatcaacga acaccggcac
     2581 gtgggcagcg gccagttccg gcgccacctg ccatgcttcg ctggccccgg cgatggcgat
     2641 cttcaccttc tcgcgggcgg cccaacgcag cagctggcgg atgtcggcgg cacggtccac
     2701 ttccaccacg atccggccct ggccggccag gtagcggctc aacgtgcggc ggccggccgg
     2761 ggtcagcagc gcatgcggcg agtctgcggc cacctggcca cgcgcctcgt cgatcatctg
     2821 ctgcagcagc atccactgcg cggcgcgcga ctggccagtc agctcggaag cggctgcgcc
     2881 gatgcgcagg aacagggcgc gcgggccgat cggatcgatg ctgccatcga gccgcatcac
     2941 gccgccctgg ccggccacga agccaccgcc gggggttgcc cccagtgcgg tgaagccgat
     3001 cccttccagc cgggtcaccg gaatcagcac cgaggccggg ttgtaggcca gggtcacgtc
     3061 gaactcgggc cgcaacggtt gctcgccgat cttcagtgcg ctgtcgacgg tgctcctctc
     3121 gaccagtact tcttcgatgc cggtctcggt gatgccgccg aacagtgcag gggtcaacgg
     3181 gcggccactg gcctcgacca cggttgcgcc agcgggcgcg gacaggccgt tgcccaccgc
     3241 acggatgatg ccgccctgca ccagcacgtc ggcgttctgc aggctgccgc gtgcgctggc
     3301 ggtgtgcacc gtggcgttgc gcaccagcag gtcctgcgcc tgtgcggatg cggagatgca
     3361 cgccagcacc atggcggtag cgccgagcca ggcccggctg cccttcgcgg cagagtgcag
     3421 ccactgcttg agcaccctca tcagcgcacc tcctggccaa gctggaaatc ggaacgcggc
     3481 gtcgccgccg gcgcactgcg gtcgtacagg cggcggccgt cgatgaagac ctgctcggcc
     3541 agcgcgtagg aactgaaggg attgccgttc cacaccacca catcggccat cttgccggcc
     3601 tccagggtgc cggtctggcc ctcgatgccc agcgccttgg cggcgttggc ggtcatccag
     3661 gtgatggcgt gctcgggtgt gatctccggc atgcgtgcac gtcgcgccga ggccatcacc
     3721 ttggcggctt cctggttgag gcgctggatg ccttcgggtg aatcggaatg gacgatggca
     3781 cagctgttct tcggccggtc gaccagcgcg atgttctccg gaataccgtc gaaggcctcc
     3841 atcttgaagc cccaccagtc ggcccacagc gcgccgcaga cgccatcggc ggccagccgg
     3901 tcagccagct tgtaggcctc cacgccgtgg tggaacgcgg ccaccttgaa gccgaattcc
     3961 ttggccaggt cgagcatggt ggccatttcg tcggcgcggt agcagtggat gtgcacgcgg
     4021 atgtcgccct ggatggcgcc ggccagcgtg tccagcttga ggtcgcgctt gccgcccgca
     4081 tccccggcgc tgtcgccctt gtcgctgccg aaccagccct tgcgcttggc cggcttgggc
     4141 ttgttcttgg cgatgtaatc ggcggcatcg atgaaggccg cgcgatagcc ggccacgttg
     4201 cccatgcgtg tggccggggc cacgcccttg ccttcgccgt agacccgctt ggggttctcg
     4261 ccgcaggcca ttttcaggcc ccacggcgcg ccggggaact tcatcgcctg gtaggtcacc
     4321 gccggtacgt tcttcagggt cacgccgcgg ccaccgacca ggttggccga accgggcagc
     4381 acctgcatgc tggtcacgcc gccggccagc gccgtggcga agcccgggtc ctgcggccac
     4441 accgagtgtt cggcccagac gttggcggtg accggcgcgg tcatctcgtt gccgtcgctg
     4501 tgcgcaccga cgcccgggct gggatacacg cccaggtgcg agtgcacgtc gatcagtccc
     4561 ggcgtgaccc acttgccctg ggcatcgatg cgggtgacgc cggcgtcggc ctgcagctgc
     4621 tggccgaccg ctacgatgcg gccctcgcgc agcagcacgt cggcgttgtc caggcgctgg
     4681 ccggtgccgg tcagcacggt ggcgttctgg atcagcaccg gcgcatcggg atgcgcctgg
     4741 taggtgctgg ggtagggatc ggcgaggaag cgcgaggcgc ccaccgccgg tgccgtactc
     4801 aatgaaagca gcgccagtgc caccccggcg cgcaacaacg tcgatgccat gcagttcccc
     4861 ttgcttgcgg cttggtccaa ccgccgacgc tagccggggc gtggtgggct tgccaagtga
     4921 ccttcttcac aggccggccg ctggcggctc gacggcaccg ccggtctggc cgaaaatagc
     4981 cggtcccccg ccgtcccgga ccccggccca tgaagagcaa gcaggaaatc gtcgacaact
     5041 ggctgccgcg ctataccggc gtgcccctgg accagttcgg ccagcacatc ctgttgacca
     5101 acttcggcgg ctacctgcat accttttccg agctgaccgg cgcgccggtc atcggcctgg
     5161 accggccgat ggccagtgcc accatcgacg gcatcaccat gatcaacttc ggcatgggca
     5221 gccccaatgc cgcgatcatc atggacctgc tgtcggcggt gatgcccaag gcggtgctgt
     5281 tcctgggcaa gtgcggcggg ctcaagcgca agaaccagct gggcgacctg gtgctgccga
     5341 tcgccgcgat ccgcggcgag ggcacctcgg gcgactacct gccgccggaa gtgccggcgc
     5401 tgccggcgtt cgcgctgcag cgtgcggtct cgaccatgat ccgcgacctc ggccacgact
     5461 actggaccgg caccgtctac accaccaacc gccgggtctg ggaacacgac gaggccttca
     5521 aggagcggct gcgggcgatg cgctgcatgg ccatcgacat ggaaacggcc acggtgttcg
     5581 ccgccggctt cgccaaccac atccccagcg gcgcgctgct gctggtgtcc gaccagccga
     5641 tgatccccga cggggtcaag accgaggcct ccgatgccaa ggtcagctcc cagttcgtgg
     5701 aaaaccatat ccagatcggc atcgaggcgc ttaagcttat ccggcgcaac ggcaagtcgg
     5761 tccgccacct gcgcttcgac gaatgatgat gatggcctgg cgcggcgcgc cggccctggg
     5821 gagtaggtga tggacgttgc cgcgcaagtg gtggaattct ggaaggaggc gggcccggaa
     5881 aagtggttcg cccgcgacga tgcgttcgac gcgcagttcc gccggttgtt cctggatgag
     5941 catttcgccg cggcgtcgcg cgcgcgcgag cattggctgg gcagcgccga gggcgcgctg
     6001 gcgctgatgc tgctgctgga ccagttcccg cgcaactgct tccgcggtac cgcccattcc
     6061 tacgccaccg atggcctggc ccggcactac gcgatgcgcg cgatcgagga aggcctggac
     6121 ctgcagctgg tgccgaagct gcgcgccttc atctacctgc cgttcgagca ctccgaggat
     6181 ccactggacc aggaccgttc ggtggcgatg ttcgacgtgc tgggtgacaa ggaatacctg
     6241 cagtacgccg aactgcaccg cgacatcatc cgccgtttcg gccgcttccc gcatcgcaac
     6301 gcggtactgg gccgcattcc ggcgccggaa gagctggact acctggccga aggcgggttt
     6361 gcggggtaga tccacgccat gcgtggatgc aaaaaacgcc ggcgttcgcc ggcgtttttc
     6421 gtaggtttca accgctgccg atcagtactt cggcacgccg ttgtccacgt cttccgacca
     6481 ggcgttgatg ccgccggtga cgttgaacac cttggtgaag cccagcgcac ggaactgctc
     6541 ggcggcctgc gcgctgcggc caccgtggtg gcacatgaac gccagcgcgg tgtccttcgg
     6601 cagggcttcc agcgtggcgc ggccgttgcc gtcgaagctc ttgaacggca cgccgacggc
     6661 ggcgatggcg cgttcgtcgg ccgggcgcac gtccaccagg gtgatgttgc cggcgcgcac
     6721 caggtcgtcg gcatcgcgaa cgctgatttc ctgcaccggc ttgggcgcgt tcgggttgtc
     6781 gatggccagg cccttgccgc ggatgtcgtc cacccagtcg atggtgatgc cgttggcgcg
     6841 acgggcgctg gccaggtcga actgcacgcg caggccgttg gactcggcgg cgatcgcgcc
     6901 ttcgtcgtgc ggggccagct ggaagttcgg ctggaagccg gcgtcgatgg tcagctgcag
     6961 cgcggcgccc ggggcgtcgg ccagcgcgcc cttcagcatt tccacggcag ccggggtcac
     7021 ggtgatgctc ggcggggtgc ggtccggcgc ggccaggccc agcacgctgc tcagctcgcc
     7081 gctggcggcc atctgcagca cgatgtcgct gccgccgacc agttcgccgt cgatgtacag
     7141 ctgcgggatg gtcggccagt cgccataggc cttgatgcct tcacggattt cctggtcggc
     7201 cagcacgttg acgtgggcga actcgacgcc gaggtcctgc agggcgccca cggccttggc
     7261 cgagaaaccg cactgcggca tcgacggctg gcccttcatg aacagcacga cgcggttgtc
     7321 gttgaggatg gattcgatgc gcgaacgcag ggcgggatcg agggacatgg acgtcggggt
     7381 tccgggaatt cgaatgatca attctacccc cggcggcatc gcgcgggatg agcagggcag
     7441 gaacattgcg tcgcatcgcc ccacggcgcg gtgggggctg ccaggtccgg gttgtcgcag
     7501 ccggccctga tcctggcccg gaccgccccg ctgggggatg tcagccggcg cggccgagca
     7561 ggtgcgcggc caccggcagc gcccgttcgc tccacagcgc gtacatccgc gccgagggat
     7621 gcaggccgtc ctcggcgatc atcgccgggt cctcgccctg ggcgcggctg atgtcggtga
     7681 tatcgacgaa ggccacgttg tgctgggcgc tgatcacctc ggcggccgcg ttgaactcgt
     7741 cggtctcgat ctcgatcgcg gccaggtcac ggccgctgcc agcgccgaac ggggtcgcgc
     7801 cccaatccgg gaaggacagc accagcaccc gctcggggcg accggcggca aagccgatcg
     7861 cgcgctgcag cagggccacg aactgggcac ggtactcgtc cagcgggcgc ccgcggtact
     7921 ggttgttgac accgatcagc aggctgacga agtcgaacgg gccctgtggc gcggccaggt
     7981 cgataccggc gtccagttca tcggtggtcc agccggtggt ggcgatggtc tgcggatcgg
     8041 ccaggtccac gccctgcgca cgcagcgcgg cggccagctg gtgcggccaa cggccttcaa
     8101 ccgcaaccgc ttcgccgatg gtgtacgaat cgcccagcgc cagataggac agcgccaccg
     8161 ctcaggccac cgaacggcgc ggcttcagcg gcacgacctt ggtcgcgtcc tcggcacgtc
     8221 gggccagcac gcggtcgatg cgggcgaaca catcgcgcat caccgaggct tccggcatca
     8281 gggtcacgcg gaagtggtgg cggtagggca cgttgaagct ggaacccggc accaccagca
     8341 cgccttcgtt gttcatcagg tccagtgcga agttgtggtc gtcgaagccc ttggcggcgg
     8401 cgccgaccac ggccgggaac gcatacagcg caccggccgg cgcgaccagc gacaggtgct
     8461 cgctggcttc gcaggcctcg atcaccgcgc gccgggtctc atacaggcgg ccaccgggcg
     8521 tgcacagttc ggaaatggtg tccgggccgt tcacggcggc ctcgatggcg tactggccgg
     8581 gcacgttggc gcacaggcgc agcgcgccca gcaggtccag cgctgcacgg aagtcgccga
     8641 gccgggcatc gtcgccgctg aggtgggccc agcccacgcg ccagccgcag gcgcggtgca
     8701 ccttgctcag gccgctgaag gtcaggcacg gatgatcgcc ggccagcgga gcgaccggct
     8761 ggaacaccgc gtcgtcgtac aggatctggt cgtagatctc atcgaccagc agcagcaggt
     8821 tgtggcggcg tgcgatctcc accacgcgtt ccagcagttc acgcggatag ctggcgccgc
     8881 tgggattgtt cgggttgatc agcacgatgg cgcgggtgcg cgaagagacc agcgtctcga
     8941 tctcgctcgg gtccggctgg aagccgttct ccggcgcgca gcggtagtac accgggcggc
     9001 catcgttgag gatggtcgag gccgaccaca gcgggtagtc gggcgagggc accagcactt
     9061 cgtcgcccgg gttgagcagg gcgcgcagcg agaggtcgat cagttcgctg acgccgttgc
     9121 cgaggaagac gcggtccggg tgcgcatcgg gcgcgccacg acgggcgtaa tagccggcga
     9181 tggcttcgcg tgcgaccggc aggccctgct ggtgggtgta cgggtcggtg cggcccatgt
     9241 cgtcggcgat cgcgcgctgc aggtgctcgg gcgcacggaa gccgaaggca ccggggttgc
     9301 cgatgttgag cttgatcagc ttgcggccct gtgcctccag ctcccgggct cgccgcgcca
     9361 gttctccgcg gatttcgtag cgcacttcgg aaaggcgctc gcggatggcc agg
//
LOCUS       DAOKIP010000160         9373 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.160,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000160 DAOKIP010000000
VERSION     DAOKIP010000160.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 9373)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9373)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9373
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.160"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            59..817
                     /gene="otsB"
                     /locus_tag="QEL58_003047"
     CDS             59..817
                     /gene="otsB"
                     /locus_tag="QEL58_003047"
                     /EC_number="3.1.3.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012481087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trehalose-phosphatase"
                     /protein_id="HDS1677491.1"
                     /translation="MAEPLPLRPPPPLLDDACALFLDVDGTLIEFAARPDAVQLLPDV
                     REAIGRISDRLEGAVALVSGRPLEQLDQLFAPLQLPAAGLHGHELRAQDGRVLRDAHD
                     DDTAEWLHALHQQAMRFAHGHPGVLVEDKGVGLALHWRGAPHAASEVRAFADRHVRGR
                     TSYRLQPGDHVVEFVPVGTDKGRAVRRMMQYLPFRGRLPVFLGDDLTDEFGFDAANGQ
                     HGWSVLVGEREPSAAVFALPDIRSVHAWLRENAY"
     gene            862..2643
                     /locus_tag="QEL58_003048"
     CDS             862..2643
                     /locus_tag="QEL58_003048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016901287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 15 protein"
                     /protein_id="HDS1677492.1"
                     /translation="MTQPDLDLGVVGNGSFGALVDKHARVVWSCLPTFDGDPTFCALL
                     GPNQQTGGDFAIELEDFADSEQEYLTNTAILRTVLRDAHGGALEILDFAPRWRQNDRF
                     YRPVSLIRQVRPLAGSPRITVRARPLADWGARVPESTWGSNHVRWILPEHVLRLTTDV
                     PVRFVREGLPFVLNHPIHLILGVDESLNRSISGYVQEAFQRTRDYWREWVRYLSIPLE
                     WQDAVIRSAITLKLCQYEDSGAIIAAMTTSIPEAPGSVRNWDYRYCWLRDAAFVVRAL
                     NRLGATRTMEQFLGYIFNLATTDGTLQPLYGIGFEAKLDEDEVPSLSGYRGMGPVRRG
                     NLAWVQRQHDVYGSVVLASTQLFFDRRLQDPGDAHTFARLEPLGEQAFALHDVPDAGL
                     WEFRGRTEVHTYTSAMCWAACDRLCKIAVRLKRDDRARYWRERADTIHARIMAESWSE
                     ELGHFTDTFGGHRLDASLLLLADIGFIDALDARFIATVDAIGRDLKHGNSLYRYVAPD
                     DFGEPETSFTICTFWYIDALAAIGRLDEARAMFETLLKQRNHLGLLSEDLAFDNGEAW
                     GNFPQTYSHVGLITAAMRLSRSWQEAS"
     gene            2640..4004
                     /gene="otsA"
                     /locus_tag="QEL58_003049"
     CDS             2640..4004
                     /gene="otsA"
                     /locus_tag="QEL58_003049"
                     /EC_number="2.4.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016901285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha,alpha-trehalose-phosphate synthase
                     (UDP-forming)"
                     /protein_id="HDS1677493.1"
                     /translation="MSRLVVVSNRVAVPGENRAGGLAVGLLAALKERGGMWFGWSGKS
                     VREGSGTLHTQKDGDIEFVTLDLSKREVDGYYNGFANRTLWPLLHFRLDLVDYDRGTR
                     ETYHKVNALFADKLAPLLREDDIVWIHDYHLIPLGALLRERGIGCRIGFFLHIPMPSA
                     DLLQAMPDHLRLFSALYAYDLVGFQTQRDADRFQTYLRLFGGGRVLDNGELEAPGGRR
                     FRAAAFPIGIDTDLIARQAGTAATKAAVKNLRNSLRDRQLAIGVDRLDYSKGLPERFL
                     GFERYLQRHPDQRGSLTYLQIAPVSRGDVTEYRQLRSQLEQIAGHINGGHAEPDWTPL
                     RYVNQNFTHATLTGFYRAAAVGLVTPLRDGMNLVAKEYVASQDPEDPGVLVLSLLAGA
                     ADELKQALLVNPHDLDGVADAIATAATMSLRRRKERWHAMMDHLRTYDINHWRRSYLD
                     ALEN"
     gene            4357..5655
                     /locus_tag="QEL58_003050"
     CDS             4357..5655
                     /locus_tag="QEL58_003050"
                     /inference="COORDINATES: protein motif:HMM:NF012894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HDS1677494.1"
                     /translation="MSAYDRFIEDAATRLELGHRARWVVEVISVWITSHHRGLDGLQQ
                     RFEQAGLASRFHSWRQPAALRLPIVASELERALGAHTLAMIAHRCGMSPGAFRVVACH
                     LLPGVVTLMDAPGGLVPSPHVHRSIAGPSPRRMTGTVPTRAMYGRAVRSLLWLLAIVV
                     VLGLTTWLQLKARTPLWTVPDIPLEHDAYLSLQQHGTQMQVHGSLPTEGDRRRIWSTL
                     LAVHGRQNVQGGITLDPRARAPRWLDRLIADLPQLQGDGLRLEFAGSQLRIDTSLMED
                     AQRLAISHRLRQDFPALDMTGLWGPGLAALAQLPAHADPTQRIEALNRTTLKFHAGTA
                     TLTGDSRQTIGTVASALRAIPAGARVEVAAHTDSAGSATTNQQLSQLRADAVAQALQE
                     QGVGSAALVPTGYGQEQPIADNRSDHGRALNRRISYRLLD"
     gene            complement(5724..6161)
                     /locus_tag="QEL58_003051"
     CDS             complement(5724..6161)
                     /locus_tag="QEL58_003051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010481531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol-disulfide oxidoreductase DCC family
                     protein"
                     /protein_id="HDS1677495.1"
                     /translation="MKAGSNRSEAAAAVDGAVIVFDGVCALCNRWVRFLLRFDRKGRY
                     RFAAMQGTRGSALLRAHGLDPQDPRSFLLLDAQGAWTDTDAILRVLAGLGGAWRLSGV
                     LRALPRSWRDAAYGVLARNRYRWFGRHDACLLPPPEQAARFLD"
     gene            complement(6136..6642)
                     /locus_tag="QEL58_003052"
     CDS             complement(6136..6642)
                     /locus_tag="QEL58_003052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014648193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4166 domain-containing protein"
                     /protein_id="HDS1677496.1"
                     /translation="MLGPAFATLAAPVQALHAAALPCRYVGQSRIERGRHWLVPLLAA
                     LAQLPREGEALPTEVAFSAHGQGERWARRFGRWPMVSRLWAHEGHLREQLGAVRFEFD
                     LQAREGGIDWSVRRVWAFGVLPLPTRWFGGVRCREAGQGQRYTFRVDVTLPWAGALIR
                     YEGWLEPQ"
     gene            complement(6663..7433)
                     /gene="pgeF"
                     /locus_tag="QEL58_003053"
     CDS             complement(6663..7433)
                     /gene="pgeF"
                     /locus_tag="QEL58_003053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010481529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan editing factor PgeF"
                     /protein_id="HDS1677497.1"
                     /translation="MAAALPLLQADWPAPAGVHALTTRRHGAGISPAPFAQFNLGNRH
                     AADGDTPANVEHNRQLLQQGLALPSAPHWLRQVHSSTVLRFDAPPVPGASEPVADAAV
                     TSVPGVVLAILTADCLPVVFAATDGSEIGAAHAGWRGLADGMLEATVAAMRTPPTQLR
                     AWLGPAAGPADYEIGEEVFHAFVGHDPAAEAAFVATRPGHWKVDLFALARQRLQAAGM
                     DPAQVHGGTVSTMADPDLYSHRRDRRTGRMATLAWIAR"
     gene            complement(7433..8422)
                     /gene="rluD"
                     /locus_tag="QEL58_003054"
     CDS             complement(7433..8422)
                     /gene="rluD"
                     /locus_tag="QEL58_003054"
                     /EC_number="5.4.99.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA pseudouridine(1911/1915/1917) synthase
                     RluD"
                     /protein_id="HDS1677498.1"
                     /translation="MSEQPSESARQAIVPDTAAGRRFDAVVAELFPEYSRSRLTEWIK
                     AGDVLLDGAQVRPRDPLRGGEVVTLTVVLETQTDAQPEDIPLDVLFEDEHLLVINKPV
                     GLVVHPGAGNHSGTLVNALLFRDPSVAVLPRAGIVHRLDKDTSGVMVVAKTLEAQTAL
                     VEQLAARDVHRQYLAIVMGALVAGGTADAPIDRHPRDRLKMAVREDGKEAITHYRLRE
                     RFRAHTALECRLETGRTHQIRVHMAHVRHPIIGDPLYGGALKLPKGASDELVAALRGF
                     KRQALHAETLEFTHPITGEPVRNTAPVPEDMLHLMKVLREDSEAFAARERDRW"
     gene            8536..>9373
                     /locus_tag="QEL58_003055"
     CDS             8536..>9373
                     /locus_tag="QEL58_003055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017155156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamD"
                     /protein_id="HDS1677499.1"
                     /translation="MIRRSAMLSAPVRLTALLLVLVIAATGCHRGAKKGDRPDEGTPV
                     EQLYEKSHKLMQGGNWSGAETSFRRLVAQYPYGPYTEQAMIETAYAQYKAGKHDDAVS
                     SIDRFIRTYPTHRNIAYLYYLRGLANSNRSTVFLRRVWSLDASRRDLSTPHQAYSDFN
                     IVVDRYPNSRYAADARSRMLELRDVFAQHELDNALYYMRRGAWVSAAGRANYLLETYP
                     QSAFQYDAVAVLADSYTHLGNKTLADDARRVLQLNQPDHPWLEGKWPKYPWMIRKLNP
                     FAG"
BASE COUNT         1521 a         3377 c         3032 g         1443 t
ORIGIN      
        1 caaggccgta gcctgacctc gaccccacgt acacgcccac gctggcaagc tgggcgtcat
       61 ggctgaaccg ctccccctgc gtccgccacc gccattgctg gacgacgcct gcgcgttgtt
      121 cctcgatgtc gacggcaccc tgatcgaatt cgctgcacgc ccggatgccg tgcagttgct
      181 gccggatgtg cgtgaagcca tcggccgcat cagcgaccgc ctggaaggtg ccgtggcact
      241 ggtcagtggt cgcccccttg aacagctgga ccagctgttt gcaccgttgc aactgcctgc
      301 cgccggcctg catggccacg aactgcgcgc ccaggacggc cgcgtgctgc gcgacgcgca
      361 tgacgacgat accgccgagt ggctgcacgc cctgcaccag caggcgatgc gcttcgccca
      421 tggccatccc ggcgtactgg tcgaagacaa gggcgtcggc ctggcgctgc attggcgtgg
      481 cgctccgcac gcggccagtg aggtgcgcgc cttcgccgac cgccacgtgc gcggccgtac
      541 cagctatcgc ctgcagccgg gcgaccatgt ggtcgagttc gtcccggtgg gtaccgacaa
      601 gggccgcgca gtgcgccgca tgatgcagta cctgcccttc cgcggtcgcc tgcccgtgtt
      661 tctcggcgat gacctcaccg acgaattcgg cttcgacgct gccaacggcc agcatggctg
      721 gagcgtgctg gtgggcgaac gtgaacccag cgcggcggtg ttcgcgctgc ccgacatacg
      781 cagcgtgcac gcctggctgc gtgagaatgc ctattgaccc ggccatcccc cacggccgca
      841 accgacgaga tgtaccgcgt gatgacccaa cccgatcttg atctgggcgt ggtcggcaac
      901 ggcagcttcg gcgccctggt cgacaaacat gcccgcgttg tctggagctg cctgcccacc
      961 ttcgacggcg atcccacctt ctgcgccctg ctcggcccca atcagcagac cggtggcgac
     1021 ttcgccatcg agctggaaga cttcgccgac agtgaacagg aatacctcac caacaccgca
     1081 atcctgcgca ccgtgctgcg cgacgcgcac ggcggtgcgc tggaaatcct cgatttcgcc
     1141 ccgcgctggc gccagaacga ccgcttctac cgcccggtca gcctgatccg gcaggtgcgc
     1201 cccctggccg gcagcccacg catcacggtg cgtgcgcggc ccctggcgga ctggggcgcg
     1261 cgcgtgcccg agtccacctg gggcagcaac cacgtgcgct ggatcctgcc cgagcacgtg
     1321 ctgcggctga ccaccgatgt gccggtgcgc ttcgtgcgcg agggcctgcc gttcgtgctc
     1381 aaccatccca tccacctgat cctgggtgtc gatgaatcac tcaaccgttc gatcagcggc
     1441 tatgtgcagg aagccttcca gcgcacccgc gattactggc gcgagtgggt gcgctacctg
     1501 tccattccgc tggaatggca ggacgcggtg atccgcagcg cgatcaccct gaaactctgc
     1561 cagtacgagg acagcggcgc gatcatcgcg gcgatgacca cctccattcc agaggcaccg
     1621 ggcagcgtgc gcaattggga ctaccgctac tgctggctgc gcgacgccgc gttcgtggtg
     1681 cgtgcgctga accgcctggg cgcgacgcgc acgatggaac agttcctcgg ctacatcttc
     1741 aacctggcca ccaccgacgg cacgctgcag ccgctgtacg gcatcggctt cgaggccaaa
     1801 cttgatgagg acgaagtgcc cagcctgtcc ggctatcgcg gcatgggccc ggtgcgccgt
     1861 ggcaacctgg cctgggtgca gcgccagcac gatgtatacg gcagcgtggt gctggcctcc
     1921 acgcagctgt tcttcgaccg ccgcctgcag gacccgggcg acgcgcacac cttcgcccgc
     1981 ctggaacccc tgggcgaaca ggcctttgcc ctgcatgacg tacccgatgc gggcctgtgg
     2041 gaattccgcg gccgcaccga ggtgcacacc tacaccagcg cgatgtgctg ggcggcgtgc
     2101 gaccgcctgt gcaagatcgc cgtgcgcctc aagcgcgacg accgcgcacg ctactggcgc
     2161 gaacgtgccg acaccatcca cgcgcgcatc atggccgaat cctggagcga ggagctgggc
     2221 cacttcaccg ataccttcgg tggccatcgc ctggatgcct cgctgctgct gctggccgac
     2281 atcggtttca tcgatgcgct ggacgcccgc ttcatcgcca ccgtcgacgc catcggccgc
     2341 gacctcaagc atggcaattc gctgtatcgc tacgtcgccc cggatgactt cggcgagccg
     2401 gaaaccagct tcaccatctg cacgttctgg tacatcgacg cgctggccgc gatcgggcgc
     2461 ctggacgagg cgcgcgcgat gttcgaaacg ctgctgaaac agcgcaatca tctgggcctg
     2521 ctgtcggagg atctggcgtt cgacaatggc gaggcctggg gcaatttccc gcagacctat
     2581 tcgcacgtcg gcctgatcac cgccgcgatg cgcctgtcgc ggtcctggca ggaggcatcg
     2641 tgagtcgtct tgtagtggtt tcaaaccgcg tggcggtgcc cggcgagaac cgtgccggcg
     2701 gcctggcggt cggcctgctg gccgcgttga aggaacgcgg cggcatgtgg ttcggatgga
     2761 gcggcaagag cgtgcgcgag ggcagtggca cgctgcacac gcagaaggac ggcgacatcg
     2821 agttcgtcac cctggacctg agcaagcgcg aagttgacgg ttactacaac ggcttcgcca
     2881 accgcacgtt gtggccgctg ctgcacttcc gcctggacct ggtcgactac gaccgtggca
     2941 cccgcgagac ctaccacaag gtcaacgcat tgttcgccga caagctcgcc ccgctgctgc
     3001 gcgaggacga catcgtctgg atccacgact accacctgat cccgctcggt gcgctgctgc
     3061 gcgaacgcgg catcggctgc cgcatcggct ttttcctgca catcccgatg ccctcggccg
     3121 acctgctgca ggcgatgccc gatcacctgc gcctgttctc cgcgctgtat gcctacgacc
     3181 tggtcggctt ccagacccag cgcgacgccg atcgcttcca gacctacctg cgcctgttcg
     3241 gcggcggccg cgtgctcgac aacggcgaac tggaagctcc cggcgggcgc cgtttccgcg
     3301 cagccgcctt cccgatcggc atcgacaccg acctgatcgc gcgccaggcc ggcaccgccg
     3361 ccaccaaggc cgcggtgaag aatctgcgca acagcctgcg tgaccgccag ctggcgatcg
     3421 gtgtcgaccg cctggactac tccaagggcc tgcccgagcg cttcctcggc ttcgagcgct
     3481 acctgcagcg tcatcccgac cagcgcggct cgctgaccta cctgcagatc gccccggtct
     3541 cgcgtggcga cgtgaccgag taccggcaac tgcgcagcca gctggaacag atcgccggcc
     3601 acatcaacgg cggccacgcc gagccggact ggacaccgct gcgctacgtc aaccagaact
     3661 tcacccatgc caccctcacc ggcttctacc gggcggcggc ggtgggcctg gtgacaccgc
     3721 tgcgcgacgg catgaacctg gtggccaagg agtacgtggc ctcgcaggac ccggaggatc
     3781 ccggggtgct ggtgctgtcg ctgctggccg gtgccgccga tgaactgaaa caggcgctgc
     3841 tggtgaatcc acacgacctg gacggcgtgg ccgatgcgat cgccaccgct gcgacgatgt
     3901 cgctgcgcag gcgcaaggag cgttggcacg cgatgatgga ccacctgcgc acctacgaca
     3961 tcaaccactg gcggcgcagt tacctggacg cgctggagaa ctgagggatt gcgcaaccag
     4021 accagcatta agcgacagaa gggcgccaag agcgctcgca gattgtcgtt ttaagcccga
     4081 aagtaggtgc acctgaaacc attccggcga ccaggagaag ggcgtcccac ggcgcgccag
     4141 cggtccgggg ccaccgtgca gatcccgctg tgcactaggc ctcgccgcat ccagcggcgg
     4201 gccctgccgc agggcccgcc gaaacgaaag aggcatcacc cccagcattt caccatgcat
     4261 tgacgcgcgc tccccagagt ggcgcccccg gagccatcgc aatccgtcgc gcctgctgcg
     4321 cggcgcgacg cacatcacat tccagggagt cactgcatgt ctgcgtacga ccgtttcatc
     4381 gaagatgccg caacacgcct cgagctgggc catcgcgccc gctgggtggt ggaggtcatc
     4441 agcgtctgga taacctccca tcaccggggc ctggacggtc tgcagcagcg gtttgaacag
     4501 gcaggtctgg cctcccgttt tcattcctgg cggcaaccgg cagcgttgcg gctgcccatc
     4561 gtcgccagtg agctcgaacg cgcgctgggc gcacacacgc tggccatgat cgcgcatcgc
     4621 tgtggcatgt cacccggtgc tttcagggtg gtcgcctgcc atcttctgcc cggggtggtc
     4681 acgctgatgg atgcgccggg cggcctggtg ccctctccgc atgtccatcg cagcatcgcg
     4741 ggcccatcgc cccggcgcat gaccggcacg gtgccaacgc gcgcgatgta tgggagggcc
     4801 gtgcgcagcc tgttgtggct gctggccatt gtcgttgtcc tcggcctcac cacctggttg
     4861 cagctgaagg cccgcacgcc cctgtggacg gtgccggaca ttccactcga acacgacgcc
     4921 tacctgtccc tgcagcaaca tggcacacag atgcaggtgc acggcagcct gcccaccgag
     4981 ggggatcgtc gccgtatctg gagcacgctg ctggcggtac acggccggca gaacgtgcag
     5041 ggcgggataa cgctggaccc acgcgcacgc gcgccgcgct ggctggatcg cctgattgcc
     5101 gatcttccgc agctgcaggg cgatgggctg cggctggaat tcgccggatc gcagctgcgc
     5161 atcgacacct cgctgatgga ggacgcgcag cggctggcca tctcgcacag gttgcgccag
     5221 gacttcccgg cactggacat gacgggcctg tggggaccag gactggctgc gctggcgcag
     5281 ctgccggcgc acgccgatcc cacacagcgg attgaagcac tgaaccggac caccctgaag
     5341 ttccacgccg gcaccgccac gctcaccggc gactcgcggc agacgatcgg caccgttgcc
     5401 tccgcactgc gcgcaatccc ggccggtgca cgcgtggagg tcgccgcgca caccgacagc
     5461 gccggttcgg ccacaaccaa ccagcagctc agccagttgc gtgccgacgc cgtcgcccag
     5521 gcactgcagg aacaaggggt gggctcggcc gcactggttc ccaccggcta cgggcaggag
     5581 cagccgatcg ccgacaaccg cagcgaccac ggtcgtgcac tgaatcgacg catcagctac
     5641 cggctgctcg actgaaaaaa ggggacggag ggaattaagt cgtttatgca taaacgactt
     5701 aattccctcc gtcccctttt tgttcaatcc aggaagcgcg cggcctgttc tggcggcggc
     5761 agaaggcagg cgtcgtggcg cccgaaccag cggtaacgat tgcgcgccag caccccatac
     5821 gccgcatcac gccagcttcg cggtagcgca cgcagcacac cgctcaggcg ccaggcgccg
     5881 cccaacccgg ccagcacgcg caggatcgcg tcggtgtcgg tccatgcgcc ctgcgcatcc
     5941 agcagcagga atgaccgtgg gtcctgcgga tccagtccat gcgcgcgcag cagcgcactg
     6001 ccccgggtgc cctgcatcgc cgcgaagcga tagcgcccct tgcggtcgaa acgcagcagg
     6061 aagcgcaccc accggttgca cagcgcgcag acaccgtcga acacgatcac cgcgccgtcg
     6121 acggcggcgg cggcttcact gcggttcgag ccagccttca tagcggatca gggctcctgc
     6181 ccagggcaag gtcacatcaa cccggaaagt gtaacgctgc ccctgccctg cttcgcggca
     6241 gcgcacaccg ccaaaccagc gcgtgggcag cggcagcacc ccgaacgccc acacccggcg
     6301 caccgaccaa tcgataccgc cctcgcgggc ctgcaaatcg aactcgaaac gcaccgcgcc
     6361 cagctgctca cgcagatggc cttcgtgcgc ccacagccgc gacaccatcg gccagcggcc
     6421 gaaccggcgt gcccagcgtt cgccctgccc gtgtgcgctg aacgccactt cggtcggcag
     6481 cgcctcgccc tccctcggca actgcgccag ggcggccagc agcggcacca gccagtgccg
     6541 tccgcgctcg atccgcgact gccccacgta gcggcacggc aacgcagcgg cgtgcagcgc
     6601 ctgcaccggc gccgccaggg tggcgaaggc cggccccaac acgcgcgcga acagcggcgt
     6661 gctcagcgcg cgatccaggc cagcgtcgcc atgcgcccgg tgcgacggtc gcgccggtgc
     6721 gagtacaggt ccgggtcggc catggtcgac accgtgccgc catgcacctg cgccgggtcc
     6781 atgccggcgg cctgcaggcg ctggcgggcc agggcgaaca ggtccacctt ccagtgcccg
     6841 ggccgggtcg ccacgaaagc cgcctccgca gccgggtcat gcccgacaaa ggcgtggaag
     6901 acctcttcgc cgatctcgta gtctgccggc ccggcggccg ggcccagcca ggcccgcagc
     6961 tgcgtcggcg gggtccgcat ggcggccacg gtggcctcca gcatgccgtc ggccaggccc
     7021 cgccaaccgg catgggccgc gccgatctcg ctgccgtcgg tggccgcgaa gaccaccggc
     7081 aggcagtcgg cggtcaggat cgccagcacc acgcccggca ccgaggtcac cgccgcgtcg
     7141 gccaccggct cgctggcacc cggcaccggc ggcgcatcga agcgcagcac ggtactgctg
     7201 tgcacctggc gcagccaatg cggcgcggac ggcagcgcca atccctgctg cagcagctgg
     7261 cggttgtgct cgacattggc cggggtatcg ccatcggccg cgtgccggtt gcccaggttg
     7321 aactgcgcga acggcgccgg cgagatgccc gcgccatgcc ggcgcgtggt cagcgcatgg
     7381 acgcctgctg gcgctggcca atcggcctgc agcaacggca gcgcggccgc catcaccagc
     7441 ggtcccgctc gcgtgcggcg aaggcttcgc tgtcttcgcg cagcaccttc atcaggtgca
     7501 gcatgtcttc cggcaccggc gcggtgttgc gcaccggctc gccggtgatc gggtgggtga
     7561 actccagggt ctcggcatgc agggcctggc gcttgaagcc gcgcagcgcg gccaccagct
     7621 cgtcactggc gcccttgggc agcttcagcg cgccgccgta cagcgggtcg ccgatgatcg
     7681 ggtggcgcac atgcgccatg tgcacgcgga tctgatgggt acggccggtt tccaggcggc
     7741 actccagcgc ggtgtgcgca cggaagcgct cgcgcaggcg gtagtgggtg atcgcttcct
     7801 tgccgtcctc gcgcacggcc atcttcaggc ggtcgcgcgg gtggcggtcg atcggcgcat
     7861 cggccgtgcc gccggccacc agtgcgccca tcacgatcgc caggtactgg cggtgcacgt
     7921 cgcgtgcggc cagctgctcg accagcgcgg tctgcgcctc cagggtcttg gccaccacca
     7981 tcacgccgct ggtgtccttg tccaggcggt gcacgatgcc ggcgcgcggc agcaccgcca
     8041 ccgacgggtc gcggaacagc agggcattga ccagggtgcc gctgtggttg cccgcgccgg
     8101 ggtggaccac cagcccgacc ggcttgttga tcaccagcag gtgctcgtcc tcgaacagca
     8161 cgtccagcgg gatgtcctcc ggctgggcgt cggtctgggt ctcgagcacc accgtgaggg
     8221 tgaccacctc gccgccgcgc agcgggtcgc gcgggcgcac ctgggcgcca tccagcagga
     8281 cgtcgcccgc cttgatccac tcggtcaggc gcgaacgcga gtattcgggg aacagttcgg
     8341 ccacgacggc gtcgaaacga cggccggccg cggtgtcggg gacgatggcc tggcgggccg
     8401 attcagaggg ttgttcagac atggcagggg gcattctttg aaattttggg gtcccggcgg
     8461 ccggtttcag tcgctggaca ggacactagg ctatcatcga cccttcgtat tccagccgcg
     8521 tcccgcctcg accccatgat ccgacgctcc gccatgctct ctgcgcccgt ccgcctcacc
     8581 gccctgctgc tggtgctggt catcgccgcc accggctgcc accgtggcgc caagaagggc
     8641 gatcgccccg atgaagggac gccggtcgaa cagttgtacg agaagagcca caagctgatg
     8701 cagggtggca actggagcgg ggctgagacc agcttccgcc gcctggtggc ccagtatccg
     8761 tacggtccct ataccgagca ggcgatgatc gaaaccgcct acgcccagta caaggccggc
     8821 aagcacgacg atgcggtgtc cagcatcgac cgcttcatcc gtacctaccc gacccaccgc
     8881 aacatcgcgt acctgtacta cctgcgcggt cttgccaact ccaaccgcag tacggttttc
     8941 ctgcgccgcg tatggtcgct ggacgccagc cgccgcgacc tgtccacgcc gcaccaggcg
     9001 tattcggact tcaacatcgt ggtcgaccgc tacccgaaca gccgctacgc cgccgatgcg
     9061 cgcagccgca tgctggagct gcgtgacgtg tttgcccagc acgagctgga caacgccctg
     9121 tactacatgc gccgcggcgc ctgggtctcg gcggccggcc gcgccaacta cctgctggaa
     9181 acctacccgc agagcgcgtt ccagtacgat gccgtcgccg tcctggctga ttcctacacc
     9241 cacctgggca acaagaccct ggccgacgac gcccgccgcg tcctgcagct gaaccagccg
     9301 gaccacccgt ggctggaagg caagtggccg aagtacccgt ggatgatccg caagctgaac
     9361 ccgttcgccg gcg
//
LOCUS       DAOKIP010000161         9320 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.161,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000161 DAOKIP010000000
VERSION     DAOKIP010000161.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 9320)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9320)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9320
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.161"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(164..430)
                     /locus_tag="QEL58_003056"
                     /pseudo
     CDS             complement(164..430)
                     /locus_tag="QEL58_003056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409676.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="PLDc N-terminal domain-containing protein"
     gene            937..3573
                     /locus_tag="QEL58_003057"
     CDS             937..3573
                     /locus_tag="QEL58_003057"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="RHS repeat protein"
                     /protein_id="HDS1677500.1"
                     /translation="MISAKDRREGKSPRSNYLNSRLCSIITGAALTLGAGFHASAQDG
                     LFNYQEYEKRIKSAQSLAAISTDEVFGDRTAGFDGSTEFFIEDVSIPGNFDLPVSVAR
                     RFSVEATNRGFRDSETKGLTLFDDWEIVVPYMSGVWTKGAGWITGDQGAQTTQRCSVN
                     TAPLLLETWGYTDIGFGIDVKWNGGNGEELLIADDPSYASAPGLEVPKWMTASRARFT
                     CLSATRNGYPGEAFVGHTPDGKKYFFDWGAEKPYATAKAGSRMMARKRVYLLASRVED
                     RYGNWVSYSYDGYRLTRIESSDGRRIDLSYDGDGRVTTVTANGRVWRYAYVGDTEGND
                     GGLSQVTLPDGSAWTYSHRGRLQSSLPLRGGDDGGGCEIRAGNAPPPTQMTVTSPSGA
                     QGIFDFEMELFIRSDPCNGLLPSHYDAWSLKKRSIMGPGLPSMVSTRGYNLQLPGGGR
                     WSSLTKPDGTQIRERYGADPGLNERKLLQKQILDAAGQVQRDELSIYTFGSETGPFAV
                     RVGRSIGLQSGQFLAGTLSALSESQFSQDGDTYRVVYSDFNRNARPARVTYTGPSGSK
                     AEIREHLDTPNPWVLDQVLSVKEVASGKVTTRYSYDAMAKPNAVYRAGALLQSVTYAA
                     DGTISTVRDGKGNTTQIQDWYRGVPRLVTNPDGTTNSMSADGNGWITSTTDALQRTKS
                     YQHDSMGRVKEVQPPVDENQWTKTTISFQQVAADEYGLSPGHWRVDNAQGARRQETYL
                     DALWQPLLVREYDANDIAGTQRWVRNSYDSEGRPIFTSYPSKDSNVATGTWTEYDALG
                     RKTSSAQDSEQGLLITTIAYSSNATTTVVDPLGHQTITRFDAFEGPDYEKPAQIIRAD
                     GSKVSIKRNAFGLTTEVAQSAN"
     gene            3536..7468
                     /locus_tag="QEL58_003058"
     CDS             3536..7468
                     /locus_tag="QEL58_003058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014645447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV secretion protein Rhs"
                     /protein_id="HDS1677501.1"
                     /translation="MASLPKWPSPQTETTSRMAFVNTEKLRMAAAVLLGLMIIFVCQV
                     AHADAWIELTGPAQISYTAPATYQLQLKSGVTSTGPKAEYLEDIQLTRNGQVISRLPN
                     GTYTENGLSAGTYQYVYKAFGVRNFNGNESYRQLISPTITVTVAAPPTPFDGAEYVSA
                     SWPNSADRGTPFSGTVTFRNTGNTTWRAGEGYRLGQAERYVSGATKLGIAEVAVPHDV
                     APGGTATFAFSGVAASENGPTTLQWQMNRNGARFGSTSSEQIFETTGRLNRGVMYEQE
                     VPTSMETGRTYRVKLKFTNTGNTTWSASAGYALGSWNPNDNVRWGRARVPMPNDVSPQ
                     LPAFFEFDVVAPSLPGVYSFQWRLLEEGKEWFGRESDNVQVTVSGPPSKVIGNIDGVT
                     SDGQIRGWACSTGIDSSIDIHAYTGGAAGSGGTIFLTGKADLASEPAVAASCKAGGNH
                     RFSLQMSNQQRRQRAGQPIYVHGISPVGQPNNTLDGSGAFVVPAAPTGTVSATPAMCQ
                     IASGAQTCNVTLAWSATDSRAELWRDGGVLVGSGASGSLAAPIGAGTSRFTLTVDGDV
                     IASALATAKRTPIAPVDPENPAPTVARRYVYDENLRLCKVIEPETGSSVFGYDAAGNL
                     SWSATGLDLPSVTECNRDAPQIASRRVSRDYDASNRLQAVVYPDGLGDQQLEYTPAGQ
                     LKIEKVFNQDRIAVVTTRTYNSLGAMTSQSRVVGSASARSLAFGYDPLGQHIRTDYPD
                     GYSVRQSLNALGQPIRLQDGAGAVLASNISYSPSGEAIALTYGNGIVRSVTENARQLA
                     SRVVDGGVADLNYSYDEAGNITQIRDAVRGDAGTISLGYDRLDRLIQASAQAYGGSGQ
                     YTFGYDTLDNIVSMRLPGKRERTFHYDDRNRLELLRDPGGNGISGFSYDSAGNLVTRN
                     GQALTYDIGGQLRSVGDVQKYFYDGAGRRAHSSVPTAPPISGKELINAAHDWEVSIPG
                     DDVGLPDLSVGNLDHTWQYLLGGELIESTEGEETSDYIYLGKRLLAIRTSSATGNTLT
                     YLHHDALNTLTATSGANGIVLTRHFWSPYGEVDAAPSAKIPGYSGHLADSDTGLIYMG
                     RRYYEPAIGRFLSVDPVTALDHGDMRHFNRYVYAYNNPYRFRDPDGRCPSCDRFSDTF
                     AKDSKAFDHPGFIIPAFVVTAAMAAPVVWELGMIALANPGTVATAANVAADAAGVTGT
                     ATGGTLAVRATRGGENAAAATGRAAHAALAQRIAAKSGWQSEPRMIGADGKVYKPDAV
                     TPNGRILELKPNTPSGMAAGARQTANYEKQLGMRARVIYYDPDKFKKP"
     gene            7465..8031
                     /locus_tag="QEL58_003059"
     CDS             7465..8031
                     /locus_tag="QEL58_003059"
                     /inference="COORDINATES: protein motif:HMM:NF025502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4304 domain-containing protein"
                     /protein_id="HDS1677502.1"
                     /translation="MTINKLIARTDEVLAPLGFNRKGALWNRTIDSIVEVIDIQVGKS
                     GDTATINAGVLQVDTFEKAWGYKPQGFVEEPFCIVRARVGEIVNNHDLWWPLNDDQTP
                     KNVAMTLETHVLPFLERSRTQEAMEAFLEAVHGNYPLPKIYLAILKCQGGDIQSACAI
                     LRKVHEKARGDWSDRSMEVARRIGCDIG"
     gene            complement(8155..8573)
                     /locus_tag="QEL58_003060"
                     /pseudo
     CDS             complement(8155..8573)
                     /locus_tag="QEL58_003060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007969100.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            8798..>9320
                     /locus_tag="QEL58_003061"
     CDS             8798..>9320
                     /locus_tag="QEL58_003061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019662240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDS1677503.1"
                     /translation="MHPIESERLRLRRIDPERDAAQMLALLNDPGFVRFIGDRGVRTQ
                     QEARDYAAARVLPAYALHGYGMYAIERLADGAWLGNAGLVRRDGLPGPDIGYAVLSEF
                     AGQGYAGEAARAVFAHARAELGIVDLYGITDLDNAVSGKILLGLGMQQRGVIQLPGVD
                     SPSRLYATPGAAQV"
BASE COUNT         1987 a         2596 c         2842 g         1895 t
ORIGIN      
        1 tgtaggcaga agccgccacc gataaaggtg gcggacggtg catggttcga aaccccgtgt
       61 gtggatgacc gggcaggctc tcggcctcca cgcaccgccc gccatagccg gctggcaaag
      121 tgcaaacaac atccacacaa cccgggtttt gaatcccgac caccacggtg ggcgctcgcg
      181 acatctcggc gcgggcgtcg cgcaggtcct ggcccgggtc catcaactgc ttggcagagc
      241 ggatggcctg gcgggcgcca cgcgagttgc gggcttccgg gaagtagatc gccaggaagt
      301 agacgacact gccgagcagc gggaacgaga agagcaggat gagccagtag aggctctgac
      361 ccgagcgaat ggcgcgcacc gcgaagtaga tggctgccag tacgtggagt ccgattccga
      421 tatagggcat atgtgccgcc tcctccgtgt ggggttggca caatagtggg tgtggggtcg
      481 ggtgccatcg cgggcgacct ggcatggcgc gccagttgat gagctcaaat cctatggaga
      541 gctatctgct gatggggtgg tgttgatgaa aagggtttca ctccgatatc gctggcgatt
      601 gtagaagagc ctcaacctcc cgatcttgcc gcatcacccg gatgagcagg caaaagacgc
      661 ctggtgtcgt ttctggcgca tcggtttgcg gaagtgcagc aggaaatttg atgaatcgtg
      721 aattcctcac gagatcgcct cggaataggt tgagaggatg tttcacttct ggctgcggcc
      781 aatccgtagg agattgccgt agctcctgat cggaaaatta gtgggtcatt acagctccgc
      841 tcaatagagg tttgacaact cgaagctgta ggcgtagttc tttgctcaaa cagcagctga
      901 tttccctttc actccttatc caaggatgta gcgaagatga tttctgccaa ggacaggcgg
      961 gagggaaaat ccccccgtag taattatctt aattcgcgac tttgctcgat catcacgggc
     1021 gcagcgctta cgttgggggc tgggttccac gcttcggcgc aagatgggct cttcaattac
     1081 caagaatatg agaagcggat aaagagcgcg cagtcgctcg ccgctatctc taccgatgag
     1141 gtgtttggcg atcggaccgc aggcttcgac ggtagtacgg agttcttcat tgaggacgtg
     1201 tccattcccg gcaactttga ccttcctgtg agcgtcgctc gacgcttttc ggtggaggcg
     1261 actaaccgag gatttcgcga tagcgagacc aagggtctga cactgttcga tgattgggaa
     1321 atcgtcgtgc cttatatgtc gggcgtgtgg accaaaggcg ctggatggat cacgggtgac
     1381 caaggggctc agaccacgca gcgttgttcg gtcaacaccg cgcccttgct gctggagacc
     1441 tggggctaca ccgacatcgg ctttggcatc gatgtgaagt ggaatggcgg aaacggcgag
     1501 gaacttctga ttgccgatga cccgtcctat gcctctgcgc caggccttga ggtacccaag
     1561 tggatgacag cgtccagagc gcgattcact tgtctgtctg caacgcgcaa cggataccca
     1621 ggcgaggcgt tcgtggggca tacgcccgat ggcaagaagt acttctttga ctggggagcg
     1681 gaaaagccct acgccacagc caaggccggg agtcgcatga tggcgcgtaa gcgcgtctac
     1741 cttctggcat cgcgtgttga ggatcgttat gggaactggg tgtcttatag ttacgacggg
     1801 taccggctca ccaggattga gtccagcgat ggacgccgga ttgacctgag ctacgatggc
     1861 gacggccggg tgaccacagt cacggccaat gggcgagttt ggcggtatgc ctatgtgggc
     1921 gatacggagg gaaatgacgg cggcttgtcc caagtgacac tcccggatgg ctctgcttgg
     1981 acctacagtc atcgcgggcg gcttcaatca agccttcctt tgcgtggcgg tgacgatggg
     2041 ggcgggtgcg agatccgcgc gggcaatgcc cctccaccca cgcagatgac ggtaacctct
     2101 ccgtcaggtg ctcaaggcat cttcgacttt gaaatggagc tgtttatccg ctctgatcct
     2161 tgcaacggac tccttccgtc gcattacgat gcatggtcct tgaagaagcg cagcatcatg
     2221 gggcccggac tgccttcgat ggttagtacg cgaggctaca acctgcagtt gccgggaggt
     2281 gggcgctggt ccagcctgac caagccggat ggcacgcaga ttcgcgaacg ctatggcgca
     2341 gatccgggct tgaacgaacg aaagctcctc caaaagcaga ttctggatgc ggccggccag
     2401 gtgcaacgtg atgagctaag catctacacc tttggttccg agacaggtcc gtttgccgtc
     2461 cgggtaggac ggtcaattgg acttcagtca ggccagttct tggcgggcac gctgagtgcg
     2521 ctgagcgaga gccaattcag tcaggatggc gatacctatc gcgtggtcta cagcgacttc
     2581 aatcgcaatg cccgtccggc acgcgtgact tacactggcc cctccggatc caaggccgag
     2641 atacgagagc atcttgatac gcccaaccct tgggtcttgg atcaggtgtt gagcgtcaag
     2701 gaggttgcgt ccgggaaggt caccacgcga tatagctatg acgccatggc caagccgaat
     2761 gccgtctatc gcgctggagc gctactacag agtgtgactt atgccgcgga tggcacgatc
     2821 agtacggtgc gtgacggaaa gggaaatacg acccagatcc aggactggta tcggggtgta
     2881 ccgcgactgg tcaccaatcc tgatggcacc accaacagca tgtcggccga cggaaacggg
     2941 tggatcacct caaccacgga tgcgctgcag aggaccaagt cctatcagca cgattcgatg
     3001 ggtcgcgtga aggaggtcca gccacccgtc gatgagaacc agtggaccaa gacaaccatc
     3061 tcgttccagc aggtcgcggc cgatgagtac ggcctttcgc cgggacactg gcgagtcgat
     3121 aacgctcaag gggcacggcg tcaggaaact tatctcgatg cgctttggca gccgctcctg
     3181 gtgcgcgaat acgatgcaaa cgacatcgcg gggacccaac ggtgggtcag gaacagctac
     3241 gacagcgagg gtcgcccgat cttcacttcc tacccttcaa aggatagcaa tgtggcgacc
     3301 ggcacctgga ctgagtacga cgcacttggg aggaaaactt cctcggccca agacagcgag
     3361 caaggcctgc tgatcacgac cattgcctac agcagcaatg ctacgactac cgtcgttgat
     3421 ccgctcggtc atcagacgat tacccggttc gatgcctttg aaggaccgga ctatgaaaag
     3481 cctgcgcaga tcattcgtgc cgacggaagc aaagtcagca taaaacggaa tgcatttggc
     3541 ctcactaccg aagtggccca gtccgcaaac tgaaaccacg tcaaggatgg cattcgtgaa
     3601 cactgaaaaa ctgcgcatgg ccgcggcggt tctgctgggg ctgatgatca tcttcgtgtg
     3661 ccaggtggca cacgctgacg cttggattga acttactggg ccagcccaaa tctcctacac
     3721 ggcaccagca acctatcagt tgcagctcaa aagtggcgtc acaagcactg gccccaaagc
     3781 tgagtatctg gaagacatac agctcacgcg caatggccaa gtgatctccc gacttccgaa
     3841 cgggacctat accgagaacg gcctgtcggc gggcacgtat cagtatgtct acaaggcatt
     3901 tggcgtgcgc aacttcaatg gcaatgagtc ttacagacag ctgatctcac ccacgatcac
     3961 ggtcacggtg gcggcaccgc caaccccttt tgacggcgcg gagtacgttt ccgcaagctg
     4021 gcctaattcg gccgatagag gaaccccgtt cagcggtact gtcaccttcc ggaacacggg
     4081 caacacaacg tggcgagcag gggaaggcta tcgactgggt caggccgagc gctacgtttc
     4141 cggcgccacg aaactcggaa ttgccgaggt tgctgtaccc cacgacgtgg ctccgggtgg
     4201 cacagcaacg tttgcgttca gcggagtagc ggccagtgaa aacggaccga caacgctcca
     4261 atggcaaatg aaccggaatg gtgctcgctt cggtagcact agcagcgagc agatctttga
     4321 gacgaccgga aggctcaatc gcggcgtcat gtatgagcaa gaggtcccga ccagcatgga
     4381 gaccgggcgg acctatcgag tcaagctgaa gttcaccaac acgggcaaca cgacgtggtc
     4441 ggcgtcggcg ggctatgcat tggggtcctg gaatcccaat gacaatgtcc gctggggtag
     4501 ggcgcgggtt ccaatgccga atgacgtcag tccacagctg cctgcgttct ttgaattcga
     4561 cgtggtagct ccttcattgc caggtgtcta cagcttccaa tggcggttgc tggaagaggg
     4621 caaagaatgg tttggtcgcg aaagcgacaa tgtccaggtc acggtcagcg ggccgccgtc
     4681 caaggtaatc ggcaacatcg atggtgtcac cagcgacggt cagattcgag gctgggcgtg
     4741 ctcgacgggc attgattcgt cgattgacat tcatgcctac accggtggag ccgccggcag
     4801 tggtgggacg atcttcctga ccggcaaggc cgacttggcg agtgagccgg ccgtggctgc
     4861 gtcctgcaag gcgggaggca atcatcgctt ctcgcttcag atgagcaacc agcagcgccg
     4921 ccagcgtgcc ggacaaccga tctacgtcca tggaatatcc cccgttggac aacccaacaa
     4981 tacccttgat ggctccggcg cctttgtggt ccctgcagcc cccactggca cggtgtccgc
     5041 gactccggcc atgtgccaaa ttgcatcggg cgctcaaacc tgcaacgtca cgttggcctg
     5101 gtctgcaacg gactcacgtg cggagctctg gcgtgatggc ggggtgttag tgggcagtgg
     5161 tgccagcggc tctcttgctg cacccatcgg tgctggaacg agccggttta ctctcactgt
     5221 agacggcgat gtgatcgcta gtgcgcttgc caccgcaaag aggactccca tagcgcctgt
     5281 cgacccagaa aatccggcgc cgacggttgc ccggagatac gtctacgacg agaacctccg
     5341 gctgtgcaag gtcatcgaac ctgagactgg gtcgagcgta tttggctacg atgcggcggg
     5401 gaatctctcc tggagtgcaa ctgggttgga tttgcccagc gtgacagaat gcaatcgcga
     5461 cgcacctcag attgcttctc gccgtgtttc gcgtgactac gacgccagca atcgtctgca
     5521 ggctgttgta tatcccgatg gtcttgggga tcaacagctt gagtacaccc cggcaggcca
     5581 attgaagatc gaaaaggtct tcaatcagga tcggattgcg gttgtcacca ctcgtaccta
     5641 caactcactc ggggcgatga caagtcagag ccgtgtggtg ggtagcgcta gcgcccggtc
     5701 cctggcattt ggctacgacc ccttggggca gcatatccgt accgactatc ccgatggtta
     5761 ctccgtgcgg caatctttga acgccttggg ccagcccatt cggttgcaag acggtgctgg
     5821 tgccgtgctc gcgagcaaca tctcctactc gcccagcggc gaagccatcg cgctgaccta
     5881 tggcaatggc atcgtccgta gcgtgaccga gaatgcacgt cagctggcca gtcgcgtcgt
     5941 tgacggcggt gtggccgatc taaactacag ctatgacgag gcgggaaaca ttacccagat
     6001 ccgtgatgct gtgcgagggg atgccgggac gatcagcttg ggctacgacc gtctcgaccg
     6061 actgattcaa gccagtgctc aagcctatgg tggcagtggg caatatacgt tcggctatga
     6121 cacgctggac aacatcgtct cgatgcggtt gccgggaaag cgggagcgta cgttccacta
     6181 cgacgaccgc aatcgcctgg agttgctgcg ggatcccggt ggcaatggca tctctggctt
     6241 ctcttacgat tctgcgggca atctggtgac gcgtaacggt caggcgctca cctacgatat
     6301 aggcggccag ctccgttcag tgggagatgt gcagaagtac ttctacgatg gagcaggacg
     6361 gcgtgcacat tcttcagtac ccactgcccc gcccatctca ggcaaggagt tgataaatgc
     6421 tgcccacgac tgggaggtgt ccatccctgg agacgatgta ggtctgccgg atctttcggt
     6481 cggaaatcta gaccacactt ggcagtactt gttgggcggg gagctgatcg aatccaccga
     6541 gggcgaggaa acctccgact acatctacct cggcaagcgg ttgctggcta ttcgcaccag
     6601 ctccgccacg ggcaacacgc tcacctatct tcatcacgat gcactcaata ccctgacggc
     6661 gaccagcggc gctaacggta ttgtgctgac gcgccacttc tggtcgccgt atggtgaagt
     6721 ggatgctgca cctagcgcaa agatcccggg ctattcaggg catcttgcgg attcagatac
     6781 aggcctaatc tacatggggc ggcgctatta cgaacccgcc attggtagat ttctgtcggt
     6841 tgatcctgtt acagcactgg atcacggaga catgcggcat ttcaaccgct atgtctatgc
     6901 ctacaacaat ccgtacagat tcagagaccc agatggacgg tgcccatcgt gtgatagatt
     6961 tagcgataca tttgctaagg attctaaggc tttcgatcac cctggcttta tcatacccgc
     7021 attcgtcgta acagctgcaa tggcagctcc cgtcgtgtgg gagcttggca tgatagccct
     7081 cgctaaccca ggaacagtcg ccactgcagc gaacgttgcg gctgacgcag ctggtgtgac
     7141 gggcactgcc actgggggta cacttgctgt tcgggctacg cgtggcggag agaatgctgc
     7201 cgctgcaact ggacgcgcag ctcacgccgc tctagcccaa aggattgcag cgaaatctgg
     7261 ctggcagtct gagccgcgaa tgattggagc tgacggtaag gtctacaaac ctgatgcagt
     7321 cacaccgaat ggtcgaatcc tcgagttgaa gccgaataca ccttctggta tggcagcggg
     7381 cgctcggcaa actgcaaatt acgaaaagca gctcggcatg cgtgcacgag tcatctatta
     7441 cgacccggac aaatttaaaa agccatgaca ataaataaac tcattgcgcg cacagatgag
     7501 gtccttgcac cccttggatt caaccgaaag ggcgcacttt ggaatcgcac gattgattca
     7561 attgttgagg tgattgatat tcaggtaggc aagtctggcg atactgcgac gattaatgcc
     7621 ggtgtgttgc aagtcgacac cttcgagaaa gcatggggct acaagcctca aggatttgtg
     7681 gaagagccct tttgcatcgt gcgtgctcgc gttggagaga tcgtcaacaa tcacgatctc
     7741 tggtggcctc tgaatgatga ccaaactcca aagaacgtcg ccatgacact ggaaacacat
     7801 gttctccctt tcttggaaag gtcgcgaact caagaggcga tggaggcatt cttggaagcc
     7861 gtacatggaa attaccccct gccgaagatc tatctggcga tcctcaaatg ccaaggcggg
     7921 gacattcaaa gtgcatgcgc tattcttcgt aaggtgcatg agaaagcgcg tggggactgg
     7981 agtgatagat ccatggaagt tgcacgaagg attgggtgtg atatcggttg aaggttctgt
     8041 aaagtcgaac aggaaataca taagtgccgc ctggacaatc ccggcattcc atacgtgctg
     8101 ctcagcacgc ctgtctgcgg cggtatagcc actgtcgccg aacacccagt cttatttgcc
     8161 atgcagcagc tcatgggtga ccgtcatgtc accgacatcg gccgcagtac acttcacgtg
     8221 atgcaccagg cctgaaaact catctacacc gatatggacc ttcatgtcga agtaccacgg
     8281 gttgcccttg cgggtctcgt gcatctcaga atctcccgcc cttgcggcgt tcttggttga
     8341 gctggcccgt ggatgatgaa ggcgatccac gatcgtgcct gcgcgcaggc tctggctctt
     8401 tcgggcaggt gcgcgttcac cgcttcaagc atcctcgccg ccaggccggg cagctccagc
     8461 agacgacgga cattgaggat cttggtctca tccggaatcg catcaggacc accgggccgg
     8521 gcgaacaacc gcatcgaggc gatctcatgc aatgctatgg atggctcctc aacatgagcc
     8581 gcattgtctc tcgggttgcc ggcaagcggc cggcactacc cgggtagttg ttcagagcat
     8641 cctttttcgc gccatccatg gcgccgatac ccccacgaac ccaccccggc cggcctctga
     8701 cacattccgg gcgcgtcctt ccacggcaat gcaaagaaaa tcaaaagcaa cagccggggg
     8761 ctggggcaca atcgggcttt ctgttggagg tctgggcgtg catccgattg aaagcgaacg
     8821 tctgcggctg cgccggatcg atccggagcg tgatgccgcg cagatgctgg cgttgttgaa
     8881 cgatccgggc ttcgtgcgct tcatcggcga tcgtggcgtg cgtacgcagc aggaggcgcg
     8941 cgattacgcg gcggcaaggg tgctgccggc ctatgcgctg catggctatg gcatgtatgc
     9001 catcgagcgg ctggccgatg gtgcctggct gggcaatgcc gggctggtgc ggcgcgatgg
     9061 cctgccgggg ccggatatcg gctatgcggt gctgtcggaa ttcgccgggc agggctatgc
     9121 cggtgaggcg gcgcgggcgg tgttcgcgca tgcacgtgcg gagctgggca tcgtggatct
     9181 gtacggcatc accgacctgg acaatgcggt gtccgggaag atcctgctgg gcctgggcat
     9241 gcagcaacgc ggggtgatcc agctgccggg cgtggacagc ccgagccggc tgtatgccac
     9301 gccgggcgcg gcgcaggtct
//
LOCUS       DAOKIP010000162         9315 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.162,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000162 DAOKIP010000000
VERSION     DAOKIP010000162.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 9315)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9315)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9315
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.162"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(99..1082)
                     /locus_tag="QEL58_003062"
     CDS             complement(99..1082)
                     /locus_tag="QEL58_003062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDS1677504.1"
                     /translation="MTLTQLRYLVAIADAELNITLAASRVHATQPGLSKQLKQLEDEL
                     GFLLFVRKGRSLESVTPAGTEVIARARAVLAEANNIRTYAANQRRESQGQLILTTTHT
                     QARFVLPPAVAAIKQAYPQVSVHLQQAGEADALDRLNQGDADIAIISTAGGEPTDGIA
                     VPLFRWRRLVVVPKGHPLDRAGRAPDLAALARQPLISYESSTRPNSSLQRAFAGHGLV
                     PDLALTALDADLIKTYVRTGLGVGLLAEMAVSSNDEDLRSWPAPAPITECIAWAVLPR
                     DRVLRDYALELVHVLAPQIDPRDLRRVLDGNQAAAWPVPPTWESLTQTITV"
     gene            1291..2250
                     /gene="cysK"
                     /locus_tag="QEL58_003063"
     CDS             1291..2250
                     /gene="cysK"
                     /locus_tag="QEL58_003063"
                     /EC_number="2.5.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase A"
                     /protein_id="HDS1677505.1"
                     /translation="MALYDSILDTVGNTPIVKLQRLAPPQVSVYAKVESFNPGGSVKD
                     RLALAIILDAEARGLLKPGDTIVEATSGNTGVALAMVAAARGYKFVATMVETFSVERR
                     KLMRAYGAKVILTPAAERGSGMVRRARELAEEHGWFLASQFANPANPAYHRNTTAAEI
                     LRDFAGKRLDYFVSGWGTGGTLTGVGEVLKVARPQTRIIATEPAGAALLKGDDWKPHK
                     IQGWTPDFVPDVLNRDVVDELVSVEDDRAIATARRLAAEEGIFVGISAGATVASALDV
                     AARAEPGSVILAMLPDTGERYFSTPLFADVNEGSDDDWLAGLP"
     gene            2462..3061
                     /locus_tag="QEL58_003064"
     CDS             2462..3061
                     /locus_tag="QEL58_003064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006388480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-acetyl-ADP-ribose deacetylase"
                     /protein_id="HDS1677506.1"
                     /translation="MKIEVWQGDITTLAVDAIVNAANETLLGGGGVDGAIHRAAGPAL
                     LAECEQLPELRPGVRCPTGEVRATGAYALPARHVLHTVGPVWHDGQRDEPALLANCYW
                     KSLQLAESLGVQSIAFPAISCGVYGYPLYQAAQIAVTETLAWQRSHAQPMRIVLVAFN
                     TATAKAYQQALAAAGQSMESESRSPLLPPLGDTGFAAAH"
     gene            complement(3154..4296)
                     /locus_tag="QEL58_003065"
     CDS             complement(3154..4296)
                     /locus_tag="QEL58_003065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019338731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDS1677507.1"
                     /translation="MRLAALTLAVAAVLVAGGCNRIGAGMDAGKAASLEFDKPVSGEI
                     TTRSGINFNDGSHHQLYQIKLDDNDLVGLKLTGRLSGSIAVFNNGSLVSTSNTVYERE
                     GDVSVAFRANGGGTYQVAVNADGPSAFGPYRLRAEKLKPYDGKPLVGGGEIVDMLGGD
                     SQDYILQVEKEGLYEIRLVSDAFDPVLKVSGQGVDAENDDSSDSTNSRLSLSLKPGKY
                     TLTARGLGDGVTGMFTLSATRIELPGNLVERDGTALPSTGSVYTMLDNEGRRRFLLTL
                     DRPADVRLDAISSQVDTVLRVVGANVELSDDDGGNGTNARLQETLPAGHYTVDVTSVN
                     NGAGLVEVRVQVDGASADGAAASAARAAADAAAVADDDAAVEAASR"
     gene            complement(4425..5429)
                     /locus_tag="QEL58_003066"
     CDS             complement(4425..5429)
                     /locus_tag="QEL58_003066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012437525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructose-bisphosphate aldolase class I"
                     /protein_id="HDS1677508.1"
                     /translation="MSIEQLAETAQAMVAPGKGIIAIDESTATIAKRFAGVGIENTEE
                     NRRAYRELLLTTPKLNEHISGAILYDETIRQSTRDGVPFAKYMADHGMIPGIKVDKGA
                     HPLAGCPGELVTEGLDGLRERLQEYYKLGARFAKWRAVINIGESIPSGTCIESNAHAL
                     ARYAALCQECGLVPMVEPEVIMDGDHDIETCYEVTEATLRSLFDALYQQNVLLEGTIL
                     KASMVISGKGCDEQADVEEVAESTVMCLKSTVPAILPGVVFLSGGQTDEQSTEHLNAM
                     NQLGNLPWPLSFSYGRAMQQAALKLWAKDMKGNYAAAQKTVYERAKDNGLAALGKWNG
                     "
     gene            complement(5628..7094)
                     /gene="pyk"
                     /locus_tag="QEL58_003067"
     CDS             complement(5628..7094)
                     /gene="pyk"
                     /locus_tag="QEL58_003067"
                     /EC_number="2.7.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003487265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase"
                     /protein_id="HDS1677509.1"
                     /translation="MFERQRRTKILATLGPATDPPGVLEDLFRAGVNVVRLNFSHGDP
                     SGQAKRAAEVRAAAARVGVEVGILADLPGPKIRIERFAEGKVQLKAGDRFDLIASENA
                     GPGSASQVGVSYLGLPQDVGPGDVLLLDDGLMQLQVVEVQGDRIVNTVLNDGVLSDRK
                     GLNKQGGGLSLGALTERDKELIGIVAKIGVDFIAVSFCRNAQDMNDARDIARSHGCDA
                     ALVSKIERTEAIENLEEIVEASDVVMVARGDLGVEIGDAELPGLQKKIIKASLAQNKV
                     VITATQMLQSMVESPIPTRAEVLDVANSVIDGTDAVMLSAETAAGAYPVKAVEAMARI
                     CLGAERQFQTETDFNASPRNLERADQAIAMATMFLSQHVGVRAIVAMTESGGTARYLS
                     RFRAKAPVFAVTRHDGARRQMALMRDVYPINFDSRGLTPREAARGSIRLLVESELLQA
                     GDRVVFTSGEHMETLGATNTLRLLEVGEDGRASGLGDL"
     gene            complement(7269..7922)
                     /locus_tag="QEL58_003068"
     CDS             complement(7269..7922)
                     /locus_tag="QEL58_003068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008268758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD hydrolase-like protein"
                     /protein_id="HDS1677510.1"
                     /translation="MSTDRSRDVLFFDLDGTLIDSQVGITACIAYALQKMDHPVPPQE
                     TLLGWIGPSLRTTFAPLFVEPARVEQAVGYYRERFDAEGWREHTVYPQVEDTLRTLHG
                     RGHRLAVVTAKNEPHARRILAHLPFGGLFEEIIGSTLDGSRSHKPELVGEALRRLQVQ
                     PAQCWMIGDRRMDIEGARHHGLRSVGVLWGFGGEAELTEAGAGQLAREPAQLETLLA"
     gene            complement(7919..9094)
                     /locus_tag="QEL58_003069"
     CDS             complement(7919..9094)
                     /locus_tag="QEL58_003069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012511960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HDS1677511.1"
                     /translation="MSIVRMTDLDLSGKRVLIRQDLNVPIENGRITSEQRITASLPTL
                     KRALEQGAAVMVTSHLGRPKEGVWSEADSLAPVAARLSELLGREVPLVRDWVDGVDVQ
                     PGQLVLLENCRMNVGEGKDDEALSKKYAALCDVFVMDAFGTAHRAQASTHGVIRFAPV
                     AAGGPLLMAELDALAKALDAPAKPLLAIVAGSKVSTKLELLANLVGKVDQLIVGGGIA
                     NTFIAAAGYNVGKSLYEPDLLDTAKKIVADAKARGADIPLPVDVVTAKQFLPDAVAEV
                     KAVDAVAEDDLILDIGPQTAAQYAQLIEKAGTVVWNGPVGVFEFEAFSKGTEALARAI
                     SSSKAFSIAGGGDTLAAVDKFDIAGDVSYISTGGGAFLEFLEGKTLPAVAALDARGA"
BASE COUNT         1481 a         3150 c         3103 g         1581 t
ORIGIN      
        1 atcccacgga atgcaagctg ttgccgttgc cgttgccgtt gccgttgccg ttgccgttga
       61 ttctgcgggt gcagggcgca gccctgctcg acccaccctc agaccgtgat ggtctgggtc
      121 agtgactccc aggtcggggg taccggccac gccgcagcct ggttgccatc cagcacccgc
      181 cgcaggtcgc gcggatcgat ctgcggtgcc aatacgtgca ccagctccag cgcgtaatcg
      241 cgcagcacgc ggtcacgcgg cagcaccgcc cacgcaatgc actcggtgat cggcgccggg
      301 gccggccacg agcgcaggtc ctcatcgttg gaactgaccg ccatctcggc cagcagcccc
      361 acgcccagcc cggtacgcac gtaggtcttg atcaagtcgg catccagcgc ggtcagcgcc
      421 aggtccggca ccaggccgtg gccagcaaag gcacgctgca gcgaggaatt cggccgcgtc
      481 gaggattcgt agctgatcag cggttgccgg gccagcgccg ccaggtccgg cgcgcggccg
      541 gcgcggtcca gcgggtggcc cttgggcacc accaccagac gccgccagcg gaacaacggc
      601 acggcgatgc catcggtcgg ctcaccgccg gccgtgctga tgatggcgat atcggcatca
      661 ccctggttca agcggtccag cgcgtcggct tcaccggcct gctgcaggtg cacgctgacc
      721 tgtggatacg cctgcttgat cgccgccacc gccggcggca gcacgaagcg cgcctgggtg
      781 tgggtggtgg tcaggatcag ctggccctgg ctctcgcggc gctggttggc ggcataggtg
      841 cggatgttgt tggcctcggc cagcaccgcg cgggcgcggg cgatgacctc ggtcccggcc
      901 ggggtgaccg attccaggct gcgccccttg cgcacgaaca acaggaagcc gagctcgtcc
      961 tccagctgct tgagctgctt ggacaggccc ggctgggtgg cgtgcacgcg cgaggcggcc
     1021 agcgtgatgt tcagctcggc gtcggcgatg gcaaccagat agcgcagctg ggtcagcgtc
     1081 atgggaggcg ggggcgcaag gggcggaggt ccactctagg gtctattgcc gtcaccagct
     1141 tataaccaaa ggttgtttaa gaaaggtatc tggtcatttc cgggcgtcat atgccggcgc
     1201 tacggtcagc cggcagccgc tggcctgaac agccagccct cccccttcgc ccgccgaagc
     1261 ccggcgcggc cccgtttccg gagcgcttcc atggccctgt acgactccat cctcgatacc
     1321 gtcggcaaca cccccatcgt caagctgcag cgcctggcgc caccgcaggt cagcgtctac
     1381 gccaaggtcg agtcgttcaa cccgggcggc tcggtgaagg accgcctggc gctggcgatc
     1441 atcctcgatg ccgaagcacg tggactgctc aagcccggcg atacaatcgt cgaagcgacc
     1501 tccggcaata ccggcgtggc gctggcaatg gtcgccgccg cgcgcggcta caagttcgtg
     1561 gccaccatgg tcgagacctt ctcggtggaa cgccgcaagc tgatgcgcgc ctatggcgcc
     1621 aaggtgatcc tgaccccggc cgccgaacgc ggcagcggca tggtgcgcag ggcgcgcgaa
     1681 ctggccgaag agcatggctg gttcctcgcc agccagttcg ccaacccggc caacccggcg
     1741 tatcaccgca acaccaccgc cgccgagatc ctgcgcgact tcgccggcaa gcggctggac
     1801 tatttcgtca gcggctgggg caccggtggc acgctcaccg gtgtgggcga agtgctgaag
     1861 gtcgcgcgcc cgcagacccg catcattgcc accgagccgg ccggcgccgc actgctcaag
     1921 ggcgatgact ggaagccgca caagatccag ggctggacgc cggacttcgt gcccgacgtg
     1981 ctcaaccgcg atgtggtgga tgaactggtg tcggtcgaag atgaccgcgc catcgccact
     2041 gcgcgccgcc tggccgccga ggaaggcatc ttcgtcggca tctccgccgg cgccaccgtt
     2101 gccagtgcgc tggatgtggc cgcgcgtgcc gaaccgggct cggtgatcct ggccatgctg
     2161 ccggacaccg gtgaacgcta cttctccacg ccgctgtttg ccgatgtgaa cgaagggtct
     2221 gacgacgact ggctggccgg gctgccgtga cgcataacgc cgggcatggc ccggcgctgc
     2281 cgcccgtcac aaaccccacc tgcttcagcc tgcatgaagg cgccgcccgc catcgtgcgt
     2341 gaaggccgtc ggatcgcagc gcgtgagacg gtcatgacgc agtatcgatg ccctgtcccc
     2401 taccgtggga acagccggcg cagatgctgc gcggatcacc tcacaggcag gagacggacg
     2461 catgaagatc gaagtttggc agggcgacat cacgaccctg gcggtggatg cgatcgtcaa
     2521 cgcggccaat gagacattgc tcggtggcgg cggtgtcgac ggtgcgatcc atcgtgccgc
     2581 cggcccggca ctgctggccg aatgcgaaca gttgccggag cttcgcccgg gcgtgcgttg
     2641 cccgaccggc gaagtgcgcg ccaccggcgc ctacgcattg ccggcgcggc atgtgctgca
     2701 cacggtggga ccggtctggc acgacggcca gcgtgacgaa ccggcgctgc tggccaactg
     2761 ctactggaag tcgttgcagc tggcggaatc cctgggcgtg cagtcgatcg cgttcccggc
     2821 aatcagctgc ggcgtgtacg gctatccgct gtaccaggcc gcgcagatcg cggtgaccga
     2881 aacgctggcg tggcagcgca gccatgcaca gccgatgcgc atcgtgctgg ttgcgttcaa
     2941 taccgccacc gccaaggcct accagcaggc gctggcagcg gccgggcaga gcatggagag
     3001 cgagtcgcgc agcccgctgc tgccgccact gggcgataca ggcttcgctg ccgcacattg
     3061 agccgcactg ttccgcggaa aagaaaaggc cgggcattgc ccggcctttt ccgttgcatc
     3121 gtcgatgtca tccacacagg gggtggatct gcctcaacgg ctcgccgctt ccaccgcagc
     3181 gtcatcgtcg gcaacggctg ctgcgtcggc cgcggcacgt gccgccgagg cagcggcgcc
     3241 gtcggcgctg gccccatcca cctgcacgcg cacttccacc aggcccgcgc cgttgttcac
     3301 gctggtcacg tcgacggtgt agtggccggc cggcaacgtt tcctgcaggc gtgcgttggt
     3361 gccattgcca ccatcgtcgt cggacagctc gacattggcg ccgaccacgc gcagcacggt
     3421 gtcgacctgg ctggagatcg catccaggcg cacgtcggcc ggacgatcca gggtcagcag
     3481 gaagcggcgg cgaccttcgt tgtcgagcat cgtgtacacg ctgcccgtgc tcggcagtgc
     3541 ggtgccatcg cgctcgacca gattgcccgg cagttcgatg cgggtcgccg acagggtgaa
     3601 catgccagtg acgccgtcac cgaggccgcg cgcggtcagg gtgtacttgc ccggcttcag
     3661 cgacaggctc aggcgcgagt tggtgctgtc gctgctatcg tcgttctcgg catccacgcc
     3721 ctggccggac accttcagca ccggatcgaa ggcatccgac accagccgga tctcgtacag
     3781 gccttccttc tccacctgca ggatgtagtc ctgcgagtcg ccgcccagca tgtcgacgat
     3841 ctcgccaccg cccaccagtg gcttgccgtc gtacggcttc agcttctccg cacgcaggcg
     3901 gtacggaccg aaggcggacg ggccatcggc attgaccgcc acctggtagg tgccgccacc
     3961 attggcacgg aatgccaccg agacgtcgcc ctcgcgctcg tagacggtat tgctggtgga
     4021 taccaggctg ccgttgttga acacggcgat cgaaccgctg agcctgccgg tcagcttcag
     4081 gccaaccagg tcgttgtcgt ccagcttgat ctggtaaagc tggtgatggc tgccgtcgtt
     4141 gaagttgatg ccgctgcgcg tggtgatctc gccggacacc ggcttgtcga attcgagcga
     4201 cgcggccttg cccgcatcca tgcccgcacc gatgcggttg caaccgccgg cgaccaggac
     4261 cgcggcaacg gccagtgtaa gtgctgccaa acgcatgttg tttctccttg gccttccatg
     4321 tcattcccac gtaccggccg ggtacgcggg ggcggaaaag atacccgcaa aagcaaacgc
     4381 cggcgtgatg ccggcgctgc cttttcatcc agcaatggaa ccgatcagcc gttccacttg
     4441 cccagcgcgg ccaggccgtt gtccttggcg cgctcgtaca cggtcttctg ggcagcagcg
     4501 tagttgccct tcatgtcctt ggcccacagc ttcagggcgg cctgctgcat ggcgcggccg
     4561 taggagaagc tcagcggcca cggcaggttg cccagctggt tcatcgcgtt caggtgctca
     4621 gtcgactgtt cgtcggtctg gccaccggac aggaacacca cgcccggcag gatcgccggc
     4681 acggtgctct tcaggcacat cacggtcgac tcggccactt cctcgacgtc ggcctgctcg
     4741 tcgcagccct tgccggagat gaccatcgat gccttcagga tggtgccttc cagcagcacg
     4801 ttctgctggt acagcgcatc gaacagcgag cgcagggtgg cttcggtgac ttcgtagcag
     4861 gtctcgatgt cgtggtcgcc gtccatgatc acttccggct cgaccatcgg caccaggccg
     4921 cattcctggc acagggcggc ataacgggcc agcgcgtggg cgttggactc gatgcaggtg
     4981 cccgacggga tgctctcacc gatgttgatg accgcacgcc acttggcgaa gcgcgcaccc
     5041 agcttgtagt actcctgcag gcgctcgcgc aggccgtcca ggccttcggt caccagctcg
     5101 cccgggcagc cggccagcgg gtgcgcaccc ttgtccacct tgatgcccgg aatcatgccg
     5161 tggtcggcca tgtacttggc gaacggcacg ccgtccctgg tcgactggcg gatggtttcg
     5221 tcgtacagga tggcgccgga aatgtgctcg ttgagcttcg gcgtggtcag cagcagttcg
     5281 cggtaggcgc gacggttctc ctcggtgttc tcgataccga cgccagcgaa acgcttggcg
     5341 atggtagcgg tggattcgtc gatcgcgatg atgcccttgc ccggggcaac catggcctgg
     5401 gcggtttcag ccagctgttc gatgctcatg tacttcctgt ggcgggtgcg ggaaaaacgt
     5461 aagtatagcc ccgccacccg ttgcctcgac gtcgaggcca ggatggaaac gattccaatg
     5521 tccgcacagg acagacgttg acctgccacg accgggccag agccacgttg gcgtccggcc
     5581 ccgggggccg gacccgcgca gggttccggc ccgatgcagt ccgtctctta cagatcgccc
     5641 aggccgctgg cgcggccgtc ttcgcccact tccagcaggc gcagggtgtt ggtcgcaccc
     5701 agggtttcca tgtgctcgcc actggtgaac accacgcggt caccggcctg cagcagttcc
     5761 gattccacca gcaggcggat gctgccgcgt gcggcttcgc gcggggtcag gccgcggctg
     5821 tcgaaattga tcggatagac atcgcgcatc agcgccatct ggcgacgggc accgtcgtgg
     5881 cgggtgaccg cgaacaccgg tgccttggcg cggaagcgcg acaggtagcg tgcggtaccg
     5941 ccggattcgg tcatcgccac gatcgcgcgc acgcccacgt gctgcgacag gaacatggtg
     6001 gccatggcga tggcctggtc ggcgcgttcc aggttgcgcg gcgaggcgtt gaagtcggtc
     6061 tcggtctgga actggcgctc ggcgcccagg cagatgcgcg ccatcgcttc cacggccttg
     6121 accggatagg cgccggcggc ggtttcggcc gagagcatca ccgcatcggt accgtcgatg
     6181 accgagttgg ccacgtccag cacttcggcg cgggtcggga tcgggctttc caccatcgac
     6241 tgcagcatct gcgtggcggt gatcaccacc ttgttctgcg ccagcgaggc cttgatgatc
     6301 ttcttctgca ggcccggcag ctcggcatcg ccgatttcca cgccgaggtc gccacgggcg
     6361 accatcacca cgtcgctggc ctcgacgatt tcttccaggt tctcgatcgc ttcggtacgt
     6421 tcgatcttcg acaccagcgc ggcatcgcag ccgtgcgagc gggcgatgtc acgcgcgtcg
     6481 ttcatgtcct gcgcgttgcg gcagaacgac acggcgatga agtcgacgcc gatcttggca
     6541 acgatgccga tcagttcctt gtcacgctcg gtcagcgcac ccagcgacag gccaccgccc
     6601 tgcttgttca ggcccttgcg gtcggacagc acgccatcgt tgagcacggt gttgacgatg
     6661 cggtcaccct gcacttccac cacctgcaac tgcatcaggc cgtcatcgag cagcagcacg
     6721 tcgcccgggc ccacgtcctg cggcaggccg aggtagctga cgccgacctg gctggcactg
     6781 ccggggccgg cgttctcgct ggcgatcagg tcgaagcggt cgcccgcctt cagctgcacc
     6841 ttgccttcgg cgaagcgctc gatgcggatc ttcgggcccg gcagatcggc caggatgccc
     6901 acttccacgc cgacgcgggc cgcagcggcg cgcacttcgg cggcacgctt ggcctggccg
     6961 gacggatcgc cgtggctgaa gttcagtcgc accacgttga cgccggcgcg gaacagatcc
     7021 tccagcacgc ccggcggatc agtggccggg ccgagggtgg caaggatctt ggtgcgacgc
     7081 tgacgctcga acatggtgaa ggggcctctc ccgataaaga acggaaatta gcacatcctt
     7141 cacgccgcat gtatacggtt acagccttgt gctgcctgac ttcgcgggtc atggaacgga
     7201 catggtccgg acatacgctg gcgcagggag ttctgtagag ccgagcccgt gcccggctct
     7261 acagggagct aggccagcag cgtttccagc tgtgccggct cacgggccag ctggccggcg
     7321 ccggcttcgg tgagttccgc ttcgccgcca aagccccaca gcacaccgac actgcgcagg
     7381 ccgtggtgac gcgcgccttc gatatccatg cggcggtcgc cgatcatcca gcactgtgcg
     7441 ggctgcacct gcagccggcg cagcgcctcg ccgaccagct ccggcttgtg gctgcgcgag
     7501 ccgtccaggg tcgagccgat gatctcctcg aacagcccgc cgaatggcag gtgggcaagg
     7561 atgcggcgcg catgtggctc gttcttggcg gtgaccaccg ccaggcggtg gccacgacca
     7621 tgcagcgtgc gcagggtgtc ttccacctgc gggtacaccg tgtgctcgcg ccagccctcg
     7681 gcgtcgaagc gttcacggta gtagcccacc gcctgttcca cccgcgccgg ttcaacgaac
     7741 aacggcgcga aggtggtgcg cagcgacgga ccgatccagc ccagcagtgt ctcctgcggc
     7801 ggtaccggat ggtccatctt ctgcagcgca taggcgatgc acgcggtaat gccgacctgc
     7861 gaatcgatca gcgtaccgtc gaggtcgaag aacaggacat ccctgctgcg atcggtgctc
     7921 atgcgccgcg cgcgtcgagg gccgccacgg ccggcagcgt cttgccttcc aggaactcca
     7981 ggaacgcacc accgccggtg gagatgtagc tgacgtcgcc agcgatatcg aacttgtcaa
     8041 cggcggccag ggtgtcaccg ccgccggcga tggagaacgc cttcgagctg gagatggcgc
     8101 gggccagcgc ttcggtgccc ttgctgaagg cttcgaattc gaacacaccg accgggccgt
     8161 tccagaccac ggtgccggcc ttctcgatca gctgtgcgta ctgcgccgcg gtctgcgggc
     8221 cgatgtccag gatcagatcg tcctcggcga cggcgtcgac cgccttcact tccgccacgg
     8281 catcgggcag gaactgcttg gcggtgacca cgtcgaccgg cagcggaatg tcggcgccac
     8341 gcgccttggc atcggccacg atcttcttcg cggtgtccag caggtccggt tcgtacagcg
     8401 acttgccgac gttgtagccg gcggcggcga tgaaggtgtt ggcgatgccg ccaccgacga
     8461 tcagctgatc gaccttgccg accaggttgg ccagcagttc cagcttggtg ctgaccttgc
     8521 tgccggcgac gatggccagc agcggcttgg ccggagcatc cagcgccttt gccagcgcat
     8581 ccagttcggc catcagcaac gggccaccgg cggcgaccgg agcgaagcgg atcacgccat
     8641 gggtcgaggc ctgggcgcgg tgcgcggtgc cgaacgcatc catcacgaac acgtcgcaca
     8701 gcgcggcgta cttcttcgac agggcctcgt catccttgcc ctcgcccacg ttcatgcggc
     8761 agttttccag cagcaccagc tggcccggct gcacgtcgac accgtcgacc cagtcgcgca
     8821 ccagcggcac ttcgcggccg agcagctcgg acaggcgtgc ggcgaccggc gccagcgaat
     8881 cggcctcgct ccacacgcct tccttcgggc gccccaggtg cgaggtgacc atcaccgccg
     8941 cgccctgctc cagcgcgcgc ttgagcgtcg gcagcgaagc ggtgatgcgc tgttcggagg
     9001 tgatgcggcc attctcgatc ggcacgttca gatcctggcg gatcagcacg cgcttgccgg
     9061 agaggtcgag gtcggtcatg cggacgatgg acatgggcaa ctctttggct cagggacggg
     9121 atgccgggct acggcagacg gccattgtat cgggtgcagg tggtgggagg gccgatgcct
     9181 gcggcaggca gaggcgcagg gcaacagcaa cagccagagc gctggcgcct tgtaacgctg
     9241 tgggtgggcc gaggcggtgt gggctggcag gggacgccgt aaccccccct ccggggtccg
     9301 gcccagccgc tggcg
//
LOCUS       DAOKIP010000163         9178 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.163,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000163 DAOKIP010000000
VERSION     DAOKIP010000163.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 9178)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9178)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9178
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.163"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            176..1348
                     /locus_tag="QEL58_003070"
     CDS             176..1348
                     /locus_tag="QEL58_003070"
                     /inference="COORDINATES: protein motif:HMM:NF016150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF418 domain-containing protein"
                     /protein_id="HDS1677512.1"
                     /translation="MTHRPPRQPLIDALRGFALLGVFLVNLRFFSLDALMTEAAQQAL
                     PSAALDQAIRTGMEWLVDMKAITLFSLLFGMGVAMQMDGHAPGSMAAHLRRMAVLLVI
                     GLLHSVLLWWGDILLVYALVGLLLPLFRHLGDRALLCSGLFIALLLPPLLSPWIREWV
                     ALLTPRAQMNATALEALAHGNLAQAWWHNLQLAAWLKLSNWALLFFVLGRFLLGYWAG
                     RRGLLQQPQAHRPLLRSIALGGLLLTAAFLWIDAHADALKQAWPALRAGVPGYLLRVS
                     YRVAPLALGIAAAAIFALLYLRPWAERVLRVFVPAGRMALSNYLLQSAICVPLFAGFG
                     WGIGPQHGLWPVLLVAAVVFPLQLWASAWWLRDHRFGPVEWLWRSASEGQWLPLRR"
     gene            complement(1441..3543)
                     /gene="dinG"
                     /locus_tag="QEL58_003071"
     CDS             complement(1441..3543)
                     /gene="dinG"
                     /locus_tag="QEL58_003071"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005411541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase DinG"
                     /protein_id="HDS1677513.1"
                     /translation="MTETVAAPRTLDDPLKDAIRKAYTTLQANTPGFSTRRSQSQMIG
                     VVSRALSKSGGVGVVEAPTGVGKSLGYLTAGVPIALASKKKLVISTGTVALQSQLVER
                     DIPNFLKATGLEATVALAKGRTRYLCTRNAAEAQGEGSQGGMFEDDAPLFDRPLAPIE
                     MDIAKRLTDAFTGGSWDGDIDNAPETISPGLRSRITTPASGCAGRRCAYSAQCAVLRS
                     RNTVRDAQIVVTNHALLLSALSIGDSDNGQPLIAAPSDMLLVLDEGHHIGNVAIDQGA
                     ASLALDEMAKRTGRLQILIAGAYRAVDKDRLGNLLPNEAIEMASNVAKQLRAFRDHIE
                     RVWMPAPADEEPMWRAANGRLPEAWREPIEALADDTRSLYNWAHAATAQVAKGKPDDA
                     ARERLQRNLGMALEMIEQQYNLWQAWRREDKDGAPPMARWVTATRDGDLVLHGSPVSA
                     AHVLRKLLWDEVDSVVMTSATLTGGGDFQSLAIDNGIPEEAEMVSLSSPFDLPNQAEL
                     IVPKFPVTPDDREGHPREVARYLDTELDWAKGSMVLFTSRWKMEKVAGLMPAARRKQV
                     LVQGEMSKTRLIDEHLRRVAAGEGSVLFGLNSFGEGLDLPGEACTTVVITQVPFAVPT
                     DPQTATLSEWFEGRGLNAFNLIAIPHALRTLTQFAGRLIRTSTDTGRVVILDSRLLTR
                     RYGKRIIDALPPFKRVIG"
     gene            complement(3699..4052)
                     /locus_tag="QEL58_003072"
     CDS             complement(3699..4052)
                     /locus_tag="QEL58_003072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008268207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677514.1"
                     /translation="MDSTALLVTVLSMVGVRLPVLIALCVGLVWVVGAPRDATRTGAL
                     VGLLLLLLSCLGGLAAGILPMWLVSSGNFGAVSGMGAVLGVLHFALALVEAIGVVLLV
                     WALVRLLRLRGNPVQ"
     gene            complement(4056..4901)
                     /gene="aroE"
                     /locus_tag="QEL58_003073"
     CDS             complement(4056..4901)
                     /gene="aroE"
                     /locus_tag="QEL58_003073"
                     /EC_number="1.1.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012481556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate dehydrogenase"
                     /protein_id="HDS1677515.1"
                     /translation="MTDRYAVFGHPVAHSKSPQIHATFGRQEGIAVDYRAIDLAPDAF
                     LAGLEAFAAEGGVGANVTLPHKETAFSVCTTLTARARRAGSVNTLLRKGDRWHGDTTD
                     GIGLVRDLTDRHGLDLRGRRMLLIGAGGSARSVAPALLDAGITELVVVNRTPERADEL
                     IDAMGEPGRAISRYWEDLRDLGDFELIVNATSAGRDRDVEFKLPLSLVNSMTTAVDLN
                     YGEAAIAFLAWARAANCRNTVDGLGMLVEQAAESFLQWHGVRPQTDEVYQSLRQGAAV
                     LAGED"
     gene            4950..5813
                     /locus_tag="QEL58_003074"
     CDS             4950..5813
                     /locus_tag="QEL58_003074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008268069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PD40 domain-containing protein"
                     /protein_id="HDS1677516.1"
                     /translation="MMRITPPLLVLAASLLSAPVAMALNEYGIEGMGVVSTRADEGRA
                     TISADGQRIVFARRSEAGWGLWEARVADGRWQQAQPLPVGVAGEARDPYFSRDGRWLL
                     FAAGRDGTLALYRAALAADGRLGTAQALAGDGGRREERGPALSADGQRLLFARQQGRG
                     AGWDLFVAPLDAQGVRGRATALDALNSAEDETDADWLGNDGAVVFSRGSGATAEVWSS
                     GCAWSGVALQPLGLSFNQPGGWTGAPVIDNAKPGEMLVASSAAKAPRAGGVDVYRLAV
                     PKVAAVPGCVQ"
     gene            complement(5913..6182)
                     /locus_tag="QEL58_003075"
     CDS             complement(5913..6182)
                     /locus_tag="QEL58_003075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006400667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SHOCT domain-containing protein"
                     /protein_id="HDS1677517.1"
                     /translation="MGPELGWMQWLIWGIGTLVFGAIIVGVFIAAWRAGKRPPEQLSA
                     ARHVAREQALPDSVQAELAALNQRKDNGQLSEVEYEQQRARVLSR"
     gene            complement(6215..7204)
                     /gene="hemB"
                     /locus_tag="QEL58_003076"
     CDS             complement(6215..7204)
                     /gene="hemB"
                     /locus_tag="QEL58_003076"
                     /EC_number="4.2.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005414824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porphobilinogen synthase"
                     /protein_id="HDS1677518.1"
                     /translation="MSHPLYRPRRMRHDEFSRRLMRENTLTTDDLIYPVFVHELAGRT
                     AVPSMPGVERLSIEELLKVAEEALELGIPVIDLFPVIDPSLKSLDASAAWAEDGLAQR
                     AIRALKSRFPELGVMTDVALDPYTTHGQDGIIDDKGYVLNDITVDALVKQSVSHAEAG
                     ADIVSPSDMMDGRIGAIRRGLDASNHINVRIMAYSAKYASAFYGPFRDAVGSAASLGK
                     ADKKTYQMDPANGDEALREIALDLEEGADMVMVKPGMPYLDLVRRVKETFGVPTFAYQ
                     VSGEYAMMKAAFANGWLDERACVMESLLGFKRAGADGVLTYFAPQVARWLRER"
     gene            complement(7224..8141)
                     /locus_tag="QEL58_003077"
     CDS             complement(7224..8141)
                     /locus_tag="QEL58_003077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010482217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bestrophin"
                     /protein_id="HDS1677519.1"
                     /translation="MIIRPRPHGWQLLYILRGSIVKAIAPKVLAILVLSIAVAAVVEL
                     APPTGIERVSVTPFTLLGLVLSIFLSFRNSACYERWWEGRKLWGQLVFESRSLARQVN
                     LLLADDHGRRRRIAYVTTAFAHALAGRLRGRIVALMALPWLDKRQREQLGQRENVPDA
                     LLSMIAAELAQALRAGDLDPILYAQLEERLHAMSSIQAGCERILTTPLPFAYTLLLHR
                     CAWMFCVLLPFGLASSLGWGTPVLSAVLAYAFFGLDQLGEEMEDPFGLEPNDLPLDAL
                     VRTIEIDQLDALGERPLPEPLLPQGYLLQ"
     gene            complement(8264..8512)
                     /locus_tag="QEL58_003078"
     CDS             complement(8264..8512)
                     /locus_tag="QEL58_003078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019302431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677520.1"
                     /translation="MGVISLLWGVLALLWMILALIPLLGWGNWFLIPFAAVGAVIAAL
                     GIMFTHPSKRGRAWAGLVLNGIVVVVGILRLGLGGGVI"
     gene            8697..9164
                     /locus_tag="QEL58_003079"
     CDS             8697..9164
                     /locus_tag="QEL58_003079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005420187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677521.1"
                     /translation="MNIRWAALAAMLLAAAGCASTSKVMLGRARAPIDPAQVQIYSTP
                     PAGSQEIAQLESASAVGFGTQGQTDAAVARLKREAAALGANGVVLVGVGSSGSPVGMS
                     VGAGTFGSHVGGGVGIGIPTTQKRAAGVAIWVPNPQPPARLPTQVITPPPPQR"
BASE COUNT         1373 a         3148 c         3198 g         1459 t
ORIGIN      
        1 ctacgccctg ctcgccacca gcgccgacaa gggcgccgtg cgcaacaccg ccctgctcgg
       61 cgattgacct ctgtttggta gtgccggccg ctggccggca tctgcacaat gcgtctgcac
      121 atcgatgagg ttgccggcca gcggccggca ctaccgatcc ggtacgctgc ggggcatgac
      181 ccaccgcccg ccgcgacagc ccctcatcga tgccctgcgt ggattcgcgc tgctcggcgt
      241 gttcctggtc aacctgcgct tcttctcgct cgatgcgctg atgaccgagg ccgcgcagca
      301 ggcgctgccc agcgcggcac tcgaccaggc catccgcacc ggcatggaat ggctggtgga
      361 catgaaggca atcaccctgt tctcgctgct gttcggcatg ggcgtggcga tgcagatgga
      421 cggccatgcg cccggcagca tggccgccca cctgcggcgg atggcggtgc tgctggtgat
      481 cggcctgctg cattcggtgc tgctgtggtg gggtgacatc ctgctggtgt acgcactggt
      541 cggcctgctg ctgccgttgt tccggcacct gggcgatcgt gccctgctgt gcagtggcct
      601 gttcatcgcc ctgctgctgc cgccgctgct gtcgccgtgg atccgcgaat gggtggccct
      661 gctcacaccg cgcgcgcaga tgaacgccac agcgctcgag gcactggcgc acggcaacct
      721 ggcccaggcg tggtggcaca acctgcagct ggcggcatgg ctgaagctga gcaactgggc
      781 actgctgttc ttcgtgctcg gccgcttcct gctgggctac tgggccggcc gtcgcggcct
      841 gcttcagcag ccgcaggcac accggccgct gctgcgctcg attgccctcg gtgggctgct
      901 gttgacggcc gcgttcctgt ggatcgatgc ccacgccgat gcgctcaagc aggcatggcc
      961 ggcgctgcgt gcgggcgttc ccggctacct gctgcgcgtg tcgtaccgcg ttgcgccact
     1021 ggccttgggc atcgcggcgg ccgccatctt cgccctgctc tatctgcgcc catgggccga
     1081 acgcgtgctg cgcgtgttcg tcccggccgg gcgcatggca ctgagcaact acctgctgca
     1141 aagcgccatc tgcgtgccgt tgtttgccgg cttcgggtgg ggtatcggcc cgcagcacgg
     1201 gctgtggcca gtgctgctgg tggcagcggt ggtgttcccg ctgcagctgt gggcgagtgc
     1261 gtggtggctg cgcgaccatc gcttcgggcc ggtggaatgg ctgtggcgca gcgccagcga
     1321 aggacaatgg ctgccactgc ggcgctagcc atcggagacg gaacggatca ggtcgtttgt
     1381 gccatttgcg tcttaatccc ctccgtcccc gttttgccgg ccagcggccg gcactaccgg
     1441 tcagccgatc acgcgcttga acggcggcag cgcgtcgatg atgcgcttgc cgtagcggcg
     1501 ggtcagcagc cgcgaatcga gaatgaccac gcggccggtg tcggtggagg tgcggatcag
     1561 gcggccggcg aactgggtca gcgtgcgcag cgcgtgcgga atcgcgatca ggttgaaggc
     1621 gttgagccca cgcccttcga accactcgct gagcgtggcg gtctgcgggt cggtcggcac
     1681 cgcgaacggc acctgggtga tcaccaccgt ggtacaggct tcgccgggca ggtcgaggcc
     1741 ctcgccgaac gagttcaggc cgaacagcac cgagccctcg cccgccgcga cgcggcgcag
     1801 gtgttcgtcg atcaagcggg tcttggacat ctcgccctgc accagcacct gcttgcggcg
     1861 cgcggccggc atcaggccgg ccaccttctc catcttccag cgcgaggtga acagcaccat
     1921 cgagcccttg gcccagtcca gctcggtgtc gaggtaacgc gccacttcgc gcggatggcc
     1981 ctcgcggtcg tccggcgtga ccgggaactt cggcacgatc agctcggcct ggttgggcag
     2041 gtcgaacggc gaggacagcg agaccatctc ggcctcttca ggaatgccgt tgtcgatcgc
     2101 cagcgactgg aaatcgccgc cgccggtcag cgtcgccgaa gtcatcacca ccgaatccac
     2161 ttcgtcccac agcagcttgc gcagcacgtg cgcagccgac accggcgagc cgtgcagcac
     2221 caggtcgccg tcgcgggtgg cggtgaccca gcgcgccatc ggcggcgcgc cgtccttgtc
     2281 ctcgcggcgc cacgcctgcc agaggttgta ctgctgctcg atcatctcca gcgccatgcc
     2341 caggttgcgc tgcaggcgct cgcgcgcggc atcgtccggc ttgcccttgg ccacctgcgc
     2401 ggtggccgca tgcgcccagt tgtagaggct gcgggtatcg tcggccagcg cttcgatcgg
     2461 ctcgcgccag gcctcgggca ggcgaccgtt ggcggcgcgc cacatcggtt cctcgtcggc
     2521 cggcgccggc atccacaccc gttcgatgtg gtcacggaag gcacgcagct gcttggcgac
     2581 gttgctggcc atctcgatcg cttcgttggg cagcaggttg ccgaggcggt ccttgtcgac
     2641 tgcgcggtag gcgccggcaa tcaggatctg caggcggccg gtgcgcttgg ccatctcgtc
     2701 cagcgccagg ctggccgcgc cctggtcgat cgccacgttg ccgatgtgat ggccttcgtc
     2761 cagcaccagc agcatgtccg acggcgccgc gatcagcggt tggccattgt cgctgtcgcc
     2821 gatcgacaac gccgacagca gcagcgcatg gttggtgacc acgatctgtg cgtcgcgcac
     2881 ggtattgcgc gaacgcagca ccgcgcactg cgccgaatag gcgcagcggc gcccggcgca
     2941 acccgaagcc ggcgtggtga tgcggctgcg caggccgggg ctgatggttt ccggcgcgtt
     3001 gtcgatgtcg ccatcccagc tgccgccggt gaaggcatcg gtcaggcgct tggcgatgtc
     3061 catctcgatc ggcgccagcg gccggtcgaa cagcggcgcg tcatcctcga acatgccgcc
     3121 ctgcgagccc tcgccctgcg cctcggcagc attgcgcgtg cacaggtagc gggtacggcc
     3181 cttggccagc gccacggtcg cttccaggcc ggtggccttg aggaaattcg ggatatcacg
     3241 ctcgaccagc tgcgactgca gggccacggt gccggtgctg atcaccagct tcttcttgct
     3301 ggccagcgcg atcggcacgc ccgcggtgag gtagcccagg ctcttgccga cgccggtcgg
     3361 cgcctcgacc acgccgacgc caccgctttt cgacagcgca cgcgacacca cgccgatcat
     3421 ctggctctgc gagcggcggg tggagaagcc gggggtattg gcctgcagcg tcgtgtacgc
     3481 cttgcggatc gcgtccttca aggggtcatc gagcgtgcgc ggagcggcga cggtttcggt
     3541 cacgccggga agtaccgtgg ctggatcagg ccggtcattg tcgcatggcc ggccacgtcc
     3601 gccgccgctg gcaccctgaa cggggcagcg acgacgccgg gcagcgggat gaacacgccg
     3661 ggcgctacag gcgacggccc agggccgtca ccggggtgtc actgcaccgg gttgccgcgc
     3721 agccgcagca ggcgcaccag cgcccatacc agcagcacca cgccgatggc ctcgaccaac
     3781 gccagcgcga agtgcagcac gccgagcacg gcgcccatgc ccgacacggc accaaagttg
     3841 ccactgctga ccagccacat cggcaggatg ccggcggcca ggccgcccag gcaggacagc
     3901 agcaacagca gcaggccgac cagcgcgccg gtacgggtgg catcgcgcgg cgcgccgacc
     3961 acccagacca ggcccacgca cagtgcgatc agcaccggca ggcgtacgcc gaccatgctc
     4021 agtacggtca ccagcaaggc ggtgctgtcc atgcctcagt cctcgccggc cagcacggcc
     4081 gcaccctggc gcagcgactg gtagacctcg tcggtctgcg ggcgcacgcc gtgccactgc
     4141 aggaagctct cggcggcctg ttcaaccagc atgccgaggc catcgacggt attgcggcag
     4201 ttcgccgcgc gcgcccaggc caggaaggcg atggcggctt cgccgtagtt caggtcaacg
     4261 gcggtggtca tcgagttgac cagcgacagc ggcagcttga actcgacatc gcggtcgcga
     4321 ccggccgagg tggcgttgac gatcagctcg aagtcgccga gatcgcgcag gtcttcccag
     4381 tagcggctga tcgcgcggcc cggttcgccc atcgcatcga tcagttcatc ggcgcgttcc
     4441 ggcgtgcggt tgaccaccac cagttcggtg atgccggcat caagcagcgc cggggcgacg
     4501 ctgcgtgcgg agccaccggc gccaatcagc agcatgcggc ggccacgcag gtccaggccg
     4561 tggcggtcgg tcaggtcgcg caccaggccg atgccatcgg tggtgtcacc gtgccagcgg
     4621 tcgcccttgc gcagcagagt gttgaccgag ccggcgcggc gcgcccgtgc ggtcagcgtg
     4681 gtacacaccg agaacgcggt ttccttgtgc ggcagggtga cgttggcgcc gacaccgccc
     4741 tcggcggcga acgcctccag gccggccagg aatgcatccg gggccaggtc gattgcgcgg
     4801 taatccaccg cgatgccttc ctggcgaccg aacgtcgcat ggatctgcgg cgacttcgag
     4861 tgggcaacgg ggtgtccgaa gacggcgtaa cggtcggtca tggaatcctc aagctggcta
     4921 gactgatgct ctttcgtgca cggacccgga tgatgcgcat caccccgccc ctgctggtgc
     4981 tcgccgccag tctactctct gcccccgtgg cgatggcgtt gaacgagtac ggcatcgaag
     5041 gcatgggcgt ggtctcgacc cgcgccgacg agggccgcgc cacgatcagt gccgatggcc
     5101 agcgcatcgt cttcgctcgc cgcagcgagg ccggctgggg cctgtgggaa gcgcgcgtgg
     5161 ccgatggccg ctggcagcag gcgcagcccc tgccggtggg cgtggccggc gaggcccgcg
     5221 atccctactt cagccgcgat gggcgctggc tgctgttcgc ggccggccgc gacggcacgc
     5281 tggcgttgta tcgcgcggca ttggccgccg atggccggct gggcactgcg caggccctgg
     5341 ccggcgatgg cgggcgccgg gaagagcgcg ggccggccct gagcgcggat ggccagcgcc
     5401 tgctgtttgc ccgccagcag ggacgtggcg caggctggga cctgttcgtg gcgccgctgg
     5461 atgcgcaggg tgtgcgtggc cgggccaccg cgctggacgc gttgaacagc gccgaggacg
     5521 agaccgacgc tgactggctc ggcaatgatg gcgcggtggt gttcagccgt ggcagcggcg
     5581 cgaccgcgga ggtctggagc agcggctgcg cgtggagcgg cgtggcgctg cagccgctgg
     5641 ggctgtcgtt caaccagccc ggcggctgga ccggcgcgcc ggtgatcgac aacgccaagc
     5701 ccggcgagat gctggtcgcc agcagtgcgg ccaaggcgcc gcgtgccggc ggcgtggatg
     5761 tgtaccggtt ggcggtaccg aaggtggcgg cggtgcccgg gtgcgtgcag tagatccacg
     5821 ccatgcgtgg atgatcgttt ggtaggtgcc gaccttggtc ggcacagaag caaaaccgcc
     5881 aaccaaggtt ggccactacc agagcatcgc cgtcagcgcg acaacaccct ggcgcgctgc
     5941 tgctcgtact cgacctcgct cagctggccg ttgtccttgc gctggttcaa cgcggccagt
     6001 tcggcctgca cgctgtccgg aagggcctgc tcacgggcca cgtggcgggc cgccgacagc
     6061 tgctccggcg ggcgcttgcc ggcccgccag gccgcgatga agacaccgac aatgatggcg
     6121 ccgaacacca gcgtaccgat gccccagatc agccattgca tccatcccag ttcgggtccc
     6181 atcgcgcatt cctccgtcta tcgtcgcgcc attgtcagcg ctcgcgcagc catcgcgcca
     6241 cctgcggcgc gaaataggtc agcacgccat cggcaccggc ccgcttgaag cccagcagcg
     6301 actccatcac gcaggcgcgc tcgtccagcc agccgttggc gaacgcggcc ttcatcatcg
     6361 cgtactcgcc gctgacctgg taagcgaagg tcggcacgcc gaacgtctct ttgacccggc
     6421 gtaccaggtc caggtagggc atgcccggct tgaccatcac catgtcggcg ccctcttcca
     6481 ggtccagcgc gatttcgcgc agggcttcgt cgccgttggc cgggtccatc tggtaggtct
     6541 tcttgtcggc cttgccgagg ctggccgcgc tgcccaccgc atcacggaac gggccgtaga
     6601 acgccgaagc gtacttggcc gaataggcca tgatgcgcac gttgatgtgg ttgctggcat
     6661 ccagcccgcg gcggatcgca ccgatgcggc cgtccatcat gtccgacggt gacacgatgt
     6721 ccgcacccgc ctcggcatgc gacaccgact gcttgaccag tgcgtcgacg gtgatgtcgt
     6781 tcagcacata gcccttgtca tcgatgatgc cgtcctggcc atgcgtggtg tacgggtcca
     6841 gcgccacgtc ggtcatcacc cccagttccg ggaaacgcga cttcagcgcg cggatcgccc
     6901 gctgcgccag gccgtcctcg gcccacgccg ccgacgcgtc cagcgacttc agcgacgggt
     6961 cgatcaccgg gaacaggtcg atcaccggaa tgcccagttc cagcgcttcc tcggccacct
     7021 tcagcagttc ttcgatcgac agccgctcca cgcccggcat cgacggcacc gcagtgcggc
     7081 cagcaagctc gtgcacgaac accgggtaga tcaggtcgtc ggtggtcagc gtgttctcgc
     7141 gcatcaggcg gcgcgagaac tcgtcatggc gcatgcggcg cgggcggtaa agcggatggg
     7201 acatggcagg ctccgaggag tggctattgc aacaggtagc cctgcggcag caggggttcg
     7261 ggcaaggggc gttcgccgag cgcgtcgagc tggtcgatct cgatcgtgcg taccagcgcg
     7321 tccagcggca ggtcgttcgg ctccaggccg aacgggtctt ccatttcctc gcccagctgg
     7381 tccaggccga agaaggcgta agccagcacc gccgacaata ctggcgtacc ccagcccagc
     7441 gaactggcca ggccgaatgg cagcagcacg cagaacatcc acgcgcagcg gtgcagcagc
     7501 agggtgtagg cgaacggcag cggggtggtg aggatgcgct cgcagccggc ctggatcgac
     7561 gacatcgcgt gcaggcgctc ctccagctgg gcgtagagga tcgggtcgag gtcaccggcg
     7621 cgcagggcct gggccagttc ggcggcgatc atcgacagca gcgcgtcagg cacgttctca
     7681 cgctggccga gctgttcacg ctggcgcttg tccagccacg gcagggccat cagggccacg
     7741 atgcgcccgc gcaggcgccc ggccagggca tgggcgaagg ccgtggtgac ataggcgatg
     7801 cggcggcgac ggccatggtc atcggccagc agcagattga cctggcgggc cagcgaacgc
     7861 gattcaaaga ccagctggcc ccacagcttg cggccttccc accagcgctc gtagcaggcg
     7921 ctgttgcgga agctgaggaa gatcgacagc accaggccga gcagggtgaa cggggtgacc
     7981 gagacgcgct cgatgccggt cggtggcgcc agttccacca ccgcggccac ggcaatggac
     8041 agaaccagga tggccagcac cttgggggcg atcgctttga cgatcgaacc gcgcaggatg
     8101 tacagcagtt gccagccgtg gggacggggt cggatgatca tggggcagcc gcgccgggcg
     8161 cggattcaca ggcacgcggg gggctcgcgc agccattcat tgtacgcccc tgcccggctg
     8221 tgggccgtgt gcctgcgacg ccctgtcgca cccggggacg ggctcagatc acgccgccgc
     8281 ccaggccgag gcgcaggatg ccgaccacca ccacgatgcc gttcaggacc agtccggccc
     8341 aggcccggcc gcgcttgctc gggtgggtga acatgatgcc cagcgcggcg atcaccgcgc
     8401 cgacggcagc gaacgggatc aggaaccagt tgccccagcc cagcagcgga atcagcgcca
     8461 ggatcatcca caacagcgcc agtacgcccc acaacagact gatcacaccc atgccgctct
     8521 cccgccgttg gttcctgggc ccaccataga cgttcccgcc gctgccgcct actgccattg
     8581 gcggggctgt caccagggcc gtgctagcgt tcggtggagc gtgccctggc ccgggtgttg
     8641 gccccgattc agagtggccc gccgatgatc gcaaccagtc ctgcaggggt gatgccatga
     8701 acattcgttg ggccgcgttg gcggccatgc tgctggccgc cgccggttgt gccagtacgt
     8761 ccaaggtgat gctgggccgt gcccgcgcgc cgatcgaccc ggcccaggtg cagatctatt
     8821 cgacgccgcc ggccggctcc caggaaatcg cgcagctgga atcggcatcc gcggtgggct
     8881 tcggcaccca gggccagacc gatgccgccg tggcacgcct gaagcgcgag gctgcggcgc
     8941 tgggtgccaa tggtgtggtg ctggtgggcg tgggcagcag cggttcgccg gtgggcatgt
     9001 cggtgggcgc cggtacgttc ggctcgcatg tcggtggcgg cgtcggcatc ggcattccga
     9061 ccacgcagaa gcgcgccgcc ggtgtcgcga tctgggtacc gaatccgcag ccgccggcac
     9121 ggctgccgac gcaggtgatc acgcctccgc cgccgcagcg gtgaccttcc cgggtcag
//
LOCUS       DAOKIP010000164         8996 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.164,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000164 DAOKIP010000000
VERSION     DAOKIP010000164.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 8996)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8996)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8996
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.164"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            10..459
                     /locus_tag="QEL58_003080"
     CDS             10..459
                     /locus_tag="QEL58_003080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008267032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677522.1"
                     /translation="MWVFAGLLLAPAVQAAPACQAPTVVARAFYEATTGKGDLLEPPP
                     ALVSPAFGKALRGERACQVREEGICTIDSDPWLDGQDGDIDSAVDYQWRQDSASAGVV
                     EMRYTVWKQARLTRVPMVRQGNGCWQVDDIVTSRGQSVRKILAQPVP"
     gene            complement(561..1355)
                     /gene="ccsA"
                     /locus_tag="QEL58_003081"
     CDS             complement(561..1355)
                     /gene="ccsA"
                     /locus_tag="QEL58_003081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019336787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein CcsA"
                     /protein_id="HDS1677523.1"
                     /translation="MTIVLIAVLLYLAASALLVRALGRDETTGSPTWLWPALPAMLLH
                     GGYHVMVAMRTNGGPDMHFFAALSLVGLGMAWLTSLVGARGRMSALGVVVFPLAAVLL
                     LAYHGYGHEPSKVLGWRLASHAWLALLAYATLSIAALLAIMLWLQERALRRREFRPWL
                     RALPPLADLESLLFRVITVGFALLTLTLVTGVLFVDDLLAQKLVHKTVLSVLSWIVFG
                     VLLIGRRRYGWRGMKAVHWTLAAMLLLLLAFFGSQFVIELVFGHSR"
     gene            1478..2854
                     /gene="ffh"
                     /locus_tag="QEL58_003082"
     CDS             1478..2854
                     /gene="ffh"
                     /locus_tag="QEL58_003082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011407905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle protein"
                     /protein_id="HDS1677524.1"
                     /translation="MFESLTQRLSGTIERLRGRGRLTEENIREATREVRIALLEADVA
                     LPVVQALIERIKVRAVGQEVLKSLTPGQALIKVVRDELTAVMGAEASDLNLNVPAPAI
                     ILMAGLQGAGKTTTVGKLAKHLKEKRKKKVMVVSADVYRPAAIEQLKTLAEQVGVLFF
                     PSSADQKPEAIVRAAIDDARKSFVDVLLVDTAGRLAIDEAMMAEIKALHAAVNPAETL
                     FVVDAMTGQDAANTAKAFGDALPLTGVVLTKTDGDARGGAALSVRYITGKPIKFVGVS
                     EKPEGLDVFHPDRIASRILDMGDVLSLVEQVEQQVDKDKAAKLAEKVAKGKKFDLNDM
                     RDQLEQMQNMGGIGGLMDKLPGLGNIPDHLKQQVSQGKEVPRMIAIISSMTKKERRNP
                     NLLNGSRRARIAKGSGVTPADVNKLMKQYMQMEKMMSKMAGGGMKGMLRSMKGMMGAM
                     GGRGMPFR"
     gene            2951..3385
                     /locus_tag="QEL58_003083"
     CDS             2951..3385
                     /locus_tag="QEL58_003083"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677525.1"
                     /translation="MKKMIVVAALVLALAACKDDTSVSQKAGSAISGTAADFVAGLGE
                     GVDKRMNVTLQADPGLAARGLTVTLGKSRGMGSKEAAVYVVADKAFKGKLVARALDAE
                     GTEIGRASAEAEFAADDARYVTFQFNEEMDSQLVRTYAVVAR"
     gene            3425..4543
                     /locus_tag="QEL58_003084"
     CDS             3425..4543
                     /locus_tag="QEL58_003084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008268173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitronate monooxygenase"
                     /protein_id="HDS1677526.1"
                     /translation="MAYAGQRLLPQVCRVNASPILERADAFCRRFSLQLPILLAPMAG
                     ACPVPLSAALANAGSMGAMGAVLSSSADIGRWMDDFRAASTGPAQVNLWVPDPAPTRD
                     VAAEAASRTFLAQWGPDVPASAADATPADFEEQFAALVAARPAVASTIMGVLQPRHVQ
                     QLKDAGIAWIACATTLSEARAAQDAGADAVVAQGVEAGGHRGSFDPAMAERQLVGLFA
                     LLPRLADHLRIPVIAAGGIADGRGIAAALTLGASAVQIGTAFLRTPEAAIASAWADGL
                     AASEPEDTWPTRAFSGRLGRGLATPYVRAAAADGAPAPRPYPVQRGLTAPMRRQAVQE
                     NRLAAMQAWAGQSAWMAPAQPAADVLRGMWQQAQALLR"
     gene            4540..5322
                     /locus_tag="QEL58_003085"
     CDS             4540..5322
                     /locus_tag="QEL58_003085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005412651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class IV family protein"
                     /protein_id="HDS1677527.1"
                     /translation="MTVTCNGQPAQVEDLLPALVNYGHFTSLQVRGGAVQGLDLHLAR
                     LAQATRELFGSELDTGQVQAWMVQALQQAARADASLRVTVYSRHFDFRSPLATVPVDV
                     LVAVSAPVALSAPKRVRSVVWQRELPQIKHVGTFGLFAERRAAMAEGFDDALLVGSDD
                     CISEGTTWNLAVHDGHQLLWPRAPALRGTAERLLKQHWPGPQVSRPLPRAALAGVKAA
                     FACNASGLWALEAIDGHVLPGSQALAEQGRAVLAGVPWDDLG"
     gene            5454..5714
                     /gene="rpsP"
                     /locus_tag="QEL58_003086"
     CDS             5454..5714
                     /gene="rpsP"
                     /locus_tag="QEL58_003086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011036396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S16"
                     /protein_id="HDS1677528.1"
                     /translation="MVKIRLTRGGAKKRPFYHIIVTDVRSARDGRNIERVGFYNPVAQ
                     GAEKRIELDLARVDHWVKNGAQPTDKVRNLIKEATKSQAAAA"
     gene            5759..6271
                     /gene="rimM"
                     /locus_tag="QEL58_003087"
     CDS             5759..6271
                     /gene="rimM"
                     /locus_tag="QEL58_003087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011407909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimM"
                     /protein_id="HDS1677529.1"
                     /translation="MKDIERRILLGRVVGAFGVRGEIKLESWTEPRSAIFRYQPWIVR
                     SPSGVETTIEGVRGRDSGKHLVARFPGVEDRDTVEAMHGTEVYVARSALPPPKPDEYY
                     WVDLEGLDVKTTEGVALGQVSHLFSTGANDVVVVRGDRERMIPFVQPDFVKSVDFEAN
                     LVVVDWDPEF"
     gene            6280..7038
                     /gene="trmD"
                     /locus_tag="QEL58_003088"
     CDS             6280..7038
                     /gene="trmD"
                     /locus_tag="QEL58_003088"
                     /EC_number="2.1.1.228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012479531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(37)-N1)-methyltransferase TrmD"
                     /protein_id="HDS1677530.1"
                     /translation="MRFDVITLFPEFLAQSAGLGVVGRAQEKGLFSLHGWNPRDYAEG
                     NYRRVDDRPFGGGPGMVMLIEPLQACLQAIRDADPAPARVIYLSPQGAPLTQAKVREL
                     AALPRMVLLCGRYEGIDERFLEANVDEEISLGDYVLSGGELGAAVIIDAVARLQDGAL
                     NDAESAAQDSFEGDLGLLDCPHYSQPAQHPLGDVPEVLRSGNHAAIAAWRRQQSLVRT
                     AQRRPDLLDEQALGKADRKLLDQARQALKQKAGP"
     gene            7193..7594
                     /gene="rplS"
                     /locus_tag="QEL58_003089"
     CDS             7193..7594
                     /gene="rplS"
                     /locus_tag="QEL58_003089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004149090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L19"
                     /protein_id="HDS1677531.1"
                     /translation="MSKLNKSIVAEFESAQITRELPKFSQGDTVVVNVKVKEGSRERV
                     QAYEGVVIATKNAGLNSSFTVRKISHGYGVERVFQTHSAIIDSVEVKRRGKVRAGKLY
                     YLRGLEGKAARIKEDLAAAAAAKAARLAEKA"
     gene            7677..8057
                     /locus_tag="QEL58_003090"
     CDS             7677..8057
                     /locus_tag="QEL58_003090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019337559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677532.1"
                     /translation="MSDINPRYPAAIQSALRFLDSKGLARAQSAPLLHRLLWRVGVAL
                     PPPILAGFGTNALVQGLLFGLFWTGLMWLMLWQGSERPLALLLVAGLLAGALFGVVMA
                     ALMHALRRHRKLPGWRQFLAGQTD"
     gene            8138..8572
                     /locus_tag="QEL58_003091"
     CDS             8138..8572
                     /locus_tag="QEL58_003091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008267627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1801 domain-containing protein"
                     /protein_id="HDS1677533.1"
                     /translation="MPAKRTAPSAVPRLLSGGNPQIAKGEGNATVQAYIAAMPDWKRP
                     IGERLDALIEQAVPGVHKAVKWNSPMYAAAPGAGWFLSFHCFTRYIKVAFFRGAALKP
                     VPPEPSRSADTRYLHLPQDGVLDEARFLDWVRQAAALPGERM"
     gene            8611..>8996
                     /locus_tag="QEL58_003092"
     CDS             8611..>8996
                     /locus_tag="QEL58_003092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014646405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1801 domain-containing protein"
                     /protein_id="HDS1677534.1"
                     /translation="MATHAPNPADAGTPAAELIDARITELGDWRGETLARVRALIHEA
                     LPEVQETWKWRGTPVWEHNGILCTGETYKQAVKLTFANGAALTDPKGLFNASLDGNTR
                     RAIDIHEGAMPNAAAFKALLREAATF"
BASE COUNT         1512 a         2980 c         3132 g         1372 t
ORIGIN      
        1 aagacaggga tgtgggtgtt cgccgggctg ctgctggccc ccgccgtgca ggccgcgccg
       61 gcctgccagg cgccgacggt cgtggcgcgc gcgttctacg aggcgacgac gggcaagggg
      121 gatctgctgg agccgccgcc tgcactggtc agcccggcct tcggcaaggc gctgcgcggc
      181 gaacgcgcct gccaggtgcg cgaggagggc atctgcacga tcgattcgga cccctggctg
      241 gatggccagg acggtgacat cgacagcgcg gtggactacc aatggcggca ggattcggcc
      301 agcgccggcg tggtcgagat gcgctacacc gtgtggaagc aggcgcgcct gacccgcgta
      361 ccgatggtcc ggcaaggcaa cggctgctgg caggtcgatg acatcgtgac cagtcgcggc
      421 cagtcggtgc ggaagatcct cgcccagccg gtgccctgaa ccgcctacgg catccacgca
      481 gggtgctgtc cagttgccgg ccagcggccg gcactaccat gcgatgttgg ggtgggtgcc
      541 gaccgcggtg cggcacgccg ctatcgcgaa tgcccgaaca ccagttcgat cacgaactgg
      601 ctgccgaaga acgccagcag cagcaacagc atcgccgcca gcgtccagtg caccgccttc
      661 atgccgcgcc agccgtagcg gcggcggccg atcagcagca cgccgaacac gatccacgac
      721 agcacgctga gcacggtctt gtgcaccagc ttctgcgcca gcagatcgtc gacgaacagc
      781 acgccggtga ccagggtcag ggtcagcagc gcgaaaccga cggtgatgac ccggaacagc
      841 agcgattcca ggtcggccag cggcggcagc gcacgcagcc acggccggaa ctcgcggcgg
      901 cgcagcgcgc gctcctgcag ccacagcatg atcgccagca gtgcggcgat gctcagcgtg
      961 gcgtaggcca gcagcgccag ccaggcgtgg ctggccaggc gccagcccag caccttgctc
     1021 ggttcgtggc cgtagccgtg gtaggccagc agcagcacgg ccgccagcgg gaacaccacc
     1081 acgcccagcg ccgacatccg tccgcgcgcg ccgaccagcg aggtcagcca ggccatgccc
     1141 aggccgacca gcgacagcgc ggcgaagaag tgcatgtccg gcccgccatt ggtgcgcatc
     1201 gccaccatca cgtggtagcc gccatgcagc agcatcgccg gcagcgccgg ccacagccag
     1261 gtgggggagc cggtggtttc atcgcggccg agcgcgcgca ccagcagggc actggcggcc
     1321 aggtagagca ggacggcgat gagaacgatt gtcatcgttg cagtttcgca tacccccgcg
     1381 gtggtggcga cggccgcggc gtcgcagccc ggcaggcggg gcggacccgt tatactgtct
     1441 gccttattgt cccccgtttt cagacaggtc gtaccgcatg ttcgagtccc tgacccagcg
     1501 cctttccggc accatcgagc gcctgcgtgg ccgcggccgc ctgaccgagg agaacatccg
     1561 cgaggcgacc cgcgaggtcc gcatcgcgct gctcgaagcc gacgtcgcgc tgccggtggt
     1621 gcaggccctg atcgagcgca tcaaggtgcg cgcggtcggc caggaagtgc tgaagtcgct
     1681 gaccccgggc caggccctga tcaaggtcgt gcgcgacgag ctgaccgcgg tgatgggcgc
     1741 tgaagccagc gacctgaacc tcaatgttcc ggccccggcc atcatcctga tggcgggcct
     1801 gcagggcgcc ggcaagacca ccaccgtggg caagctggcc aagcacctga aggaaaagcg
     1861 caagaagaag gtgatggtgg tgtcggccga cgtctaccgt ccggccgcga tcgagcagct
     1921 gaagaccctg gccgagcagg tcggcgtgct gttcttcccg tccagcgccg accagaagcc
     1981 ggaagccatc gtccgcgccg ccatcgatga tgcgcgcaag tcgttcgtcg acgtgctgct
     2041 ggtcgatacc gccggccggc tggccatcga cgaagcgatg atggccgaga tcaaggccct
     2101 gcacgctgcc gtgaacccgg ccgaaaccct gttcgtggtc gatgccatga ccggccagga
     2161 cgcggccaac accgccaagg ccttcggtga cgcgctgccg ctgaccggcg tggtgctgac
     2221 caagaccgac ggtgacgccc gtggcggtgc cgcgctgagc gtgcgctaca tcaccggcaa
     2281 gccgatcaag ttcgtcggcg tcagcgaaaa gccggaaggc ctggatgtgt tccacccgga
     2341 ccgcatcgcc agccgcatcc tcgacatggg cgacgtgctg tcgctggtcg agcaggtcga
     2401 gcagcaggtc gacaaggaca aggccgccaa gctggccgag aaggtcgcca agggcaagaa
     2461 gttcgacctg aacgacatgc gcgaccagct ggagcagatg cagaacatgg gcggcatcgg
     2521 cggcctgatg gacaagctgc cgggcctggg caacatcccc gaccatctga agcagcaggt
     2581 cagccagggc aaggaagtgc cgcgcatgat cgccatcatc agctcgatga ccaagaagga
     2641 acggcgcaac ccgaacctgc tcaacggctc gcgccgcgcg cgcatcgcca agggctcggg
     2701 cgtgactccg gccgacgtca acaagctgat gaagcagtac atgcagatgg aaaagatgat
     2761 gagcaagatg gcgggcggcg gcatgaaggg catgctgcgc agcatgaagg gcatgatggg
     2821 cgccatgggc ggccgcggca tgccgttccg ttgatgcctg aaagggggag ggcgcagggg
     2881 gccgggaccg gcacttgcgt ggccagcccc ctgttgcttg actacgtatt gatctgacaa
     2941 gggaatgcac atgaagaaga tgatcgtggt agcggcgctg gtactggcgc tggccgcctg
     3001 caaggacgac acctcggtat cgcagaaggc cggcagtgcc atcagtggta ccgcagccga
     3061 tttcgtcgct ggcctgggcg aaggcgtgga caagcgcatg aacgtgacgc tgcaggccga
     3121 tccgggcctg gcggcgcggg gcctgaccgt gaccctgggc aagagccgcg gcatgggctc
     3181 caaggaagcg gccgtgtatg tggtggccga caaggccttc aagggcaagc tggttgcgcg
     3241 tgcgctggat gccgagggca ccgaaatcgg ccgtgcatcg gccgaggcgg aattcgccgc
     3301 cgacgacgca cgctatgtga ccttccagtt caacgaggaa atggacagcc agctggtgcg
     3361 cacctacgcg gtggtggcgc gctgatcctc gcgcggccag cccctcgggt tctggccgca
     3421 gcgactggcg tatgctgggc agcgacttct cccacaggta tgtcgcgtga acgcatcgcc
     3481 gattcttgaa cgcgccgacg ccttctgtcg gcgtttttca ttgcagcttc cgatcctgct
     3541 ggcaccgatg gccggcgcct gcccggtgcc gttgtcggcc gcgctggcca atgccggcag
     3601 catgggcgcg atgggcgcag tgctgtcgtc atcggccgat atcggccgat ggatggacga
     3661 cttccgtgcc gcttccaccg gtccggcaca ggtgaacctg tgggtgccgg acccggcgcc
     3721 gacccgtgat gttgccgccg aggctgccag ccgcaccttc cttgcacagt gggggccgga
     3781 cgtgccggcc agtgctgccg atgccacgcc tgccgatttt gaggaacagt tcgccgcgtt
     3841 ggtggcggcg cgcccggcag tggcctcgac catcatgggc gtgctgcagc cacgccatgt
     3901 gcagcagctg aaggatgccg gcatcgcctg gatcgcctgt gcgaccacct tgtccgaagc
     3961 acgcgcggca caggacgccg gcgccgatgc ggtggtggcg cagggcgtgg aagcgggcgg
     4021 ccatcgcggt tcctttgatc cggcgatggc cgagcgccag ctggtcgggc tgttcgcgct
     4081 gctgccgcgc ctggccgatc acctgcggat tccggtcatc gctgccggtg gcatcgccga
     4141 tggccgtggc atcgccgccg cgctcacctt gggcgccagc gccgtgcaga tcggtacggc
     4201 cttcctgcgc acgcccgaag cggcgatcgc ctcggcgtgg gccgacgggc tggccgccag
     4261 cgagccggag gatacctggc cgacgcgtgc cttcagtggc cgcctcggtc gtggcctggc
     4321 caccccctat gtgcgcgccg ccgccgcgga cggcgcacct gcaccgcgcc cgtacccggt
     4381 gcagcgcggc ctgaccgcac cgatgcgcag gcaggccgta caggaaaacc ggctggcggc
     4441 gatgcaggcg tgggccgggc agtcggcatg gatggccccg gcacagccgg ccgccgacgt
     4501 gctgcgtggc atgtggcaac aggcgcaggc gctgctgcga tgacggtgac ctgcaacggc
     4561 cagccagcgc aggtcgagga cctgctgccg gcactggtca actatggcca tttcacctcg
     4621 ctgcaggtgc gcggcggtgc cgtgcagggg ctcgacctgc atctggcgcg gcttgcgcag
     4681 gccacgcgcg aactgtttgg cagcgaactg gatacggggc aggtgcaggc gtggatggtg
     4741 caggcgctgc agcaggcggc gcgggccgat gcctcgctgc gggtgacggt gtactcgcgc
     4801 cacttcgatt tccgcagccc gctggcgacc gtgccggtgg acgtgctggt ggccgtctcg
     4861 gcgccggtgg cactgagcgc acccaagcgg gtgcgcagcg tggtctggca gcgcgagctg
     4921 ccgcagatca agcatgtagg cacttttggc ctgttcgccg agcggcgtgc ggcgatggcc
     4981 gagggcttcg acgatgcctt gctggtcggc agcgacgact gcatcagcga aggcacaacc
     5041 tggaacctgg ccgtccacga cggtcaccag ttgctctggc cgcgcgcccc cgccctgcgg
     5101 ggtaccgccg agcgcctgct gaagcagcac tggcccggcc cgcaggtcag ccggcccctc
     5161 ccgcgggcgg ccctggctgg cgtgaaggcg gccttcgcct gcaatgccag cggcctgtgg
     5221 gcgctggagg ccatcgacgg gcatgtcctg ccgggttcgc aggcgctggc tgaacagggt
     5281 agggcggtgc tggcaggggt gccttgggac gatctgggct gaaagccccg ccgggcaggg
     5341 cccggtgcta ccgtgaaggt cggggcaccc ccggggttgg ctcggcccgg ctctgccgct
     5401 ataatcgccc gcttacctcg ccatcctggc gactgggcaa taggaaaaac accatggtca
     5461 agattcgact gacccgcggc ggcgccaaga agcgtccgtt ctaccacatc atcgtcaccg
     5521 acgtgcgcag cgcgcgcgac ggccgcaaca tcgagcgcgt tggcttctac aacccggtcg
     5581 cccagggcgc cgagaagcgc atcgagctgg acctggcccg cgttgaccat tgggtcaaga
     5641 acggcgccca gccgaccgac aaggtccgca acctgatcaa ggaagcgacc aagtcccagg
     5701 ccgctgcggc ctgatcctga cgggccacgc ttcggcgtgg ccctcttggt tgaagcagat
     5761 gaaagatatc gagcgccgca tcctgctggg cagggttgtc ggcgcttttg gtgtgcgcgg
     5821 cgagatcaag ctcgagtcct ggaccgagcc acgttccgcc attttccgtt accagccgtg
     5881 gatcgtgcgc agcccgtccg gcgtggaaac cacgattgaa ggtgtgcgtg gccgcgacag
     5941 cggcaagcac ctggtcgccc gtttccccgg cgtcgaggac cgcgataccg tcgaagcaat
     6001 gcacggcacc gaggtctacg tggcgcgcag tgcgttgccg ccgccgaagc ccgatgagta
     6061 ctactgggtt gacctggaag gcctggacgt gaagaccacc gagggcgttg ccctgggcca
     6121 ggtctcgcac ctgttcagca ccggcgccaa cgacgtggtg gtggtccgtg gtgaccgcga
     6181 gcggatgatt ccgttcgtgc agccggactt cgtcaaatcg gtcgacttcg aggccaacct
     6241 ggtcgtggtc gactgggatc ccgagttctg agtgtgagca tgcgtttcga cgtcatcacc
     6301 ctgttccccg agttcctcgc ccagtccgct gggttgggcg tggtcgggcg cgcgcaggag
     6361 aagggcctgt tcagcctgca tggctggaat ccccgtgatt acgccgaagg caattaccgc
     6421 cgggtggacg accgtccgtt cggcggtggc ccgggcatgg tgatgttgat cgagccgctg
     6481 caggcctgcc tgcaggcgat ccgcgacgcc gacccggccc cggcgcgggt gatctacctc
     6541 agcccgcagg gcgcaccgct gacccaggcc aaggtgcggg aactggcggc attgccgcgc
     6601 atggtcctgc tctgcggccg ctacgaaggc atcgacgaac gtttcctgga agccaatgtc
     6661 gacgaggaga tttccctcgg cgattacgtg ctgtccgggg gcgagctggg cgcggcggtg
     6721 atcatcgacg ccgtggcccg cctgcaggac ggcgccctga acgacgccga atcggcggcg
     6781 caggacagct tcgagggtga cctcggcctg ctcgactgcc cgcattacag ccagccggcc
     6841 cagcatccac tgggtgacgt gccggaggtg ctgcgctcgg gcaaccacgc ggccatcgct
     6901 gcctggcgcc gccagcagtc gttggtccgt accgcccagc ggcgcccgga cctgctggat
     6961 gaacaggcac tgggcaaggc cgaccgcaaa ctgctggacc aggcccggca ggccctgaaa
     7021 cagaaggccg gcccctagcg cagggctggc tttatcggct atcatgacca attcccgcca
     7081 gccccggccg gcgcgcgcag tacccacaac aaacgtgcag cacagtccag tgactgcatc
     7141 agcctacgtt gtcgaaacga cacacccacc cgaacaagaa tcggtgtaac ccatgagcaa
     7201 gctgaacaag tccatcgtcg cggaattcga atccgcccag atcacccgcg aactgccgaa
     7261 gttcagccag ggcgacaccg ttgtcgtcaa cgtgaaggtg aaggaaggca gccgcgagcg
     7321 cgtgcaggcc tacgaaggcg ttgtgatcgc caccaagaat gccggcctga actcctcgtt
     7381 caccgtccgc aagatctcgc acggctacgg cgtcgagcgc gtgttccaga cccacagcgc
     7441 catcatcgac tcggtcgaag tgaagcgtcg tggtaaggtc cgcgccggta agctgtacta
     7501 cctgcgtggc ctggaaggca aggctgcccg catcaaggaa gacctggctg ccgctgctgc
     7561 cgccaaggct gcccgtctgg ccgaaaaggc ctgataaaca acttcggttg ttgccgcgac
     7621 ggccaccttc gggtggccgt ttgcgtttcc ggccgtgcat cggtcacgat caggtgatga
     7681 gcgacatcaa tccgcgctat cccgccgcaa tccagtcggc gctgcgcttt ctcgacagca
     7741 aggggctggc gcgtgcgcag tcggccccgc tgttgcatcg gctgctgtgg cgagtgggcg
     7801 tcgcattgcc accgccgatc ctggccggct tcggcaccaa tgcgctggtg cagggcctgt
     7861 tgttcgggct gttctggacc ggcttgatgt ggctgatgct gtggcagggc agtgagcgcc
     7921 cgctggccct gctgctggtg gccgggttgc tggccggtgc cttgttcggc gtggtgatgg
     7981 cggcgctgat gcatgcgctg cggcgtcacc gcaagctgcc gggctggcgc cagttcctgg
     8041 ccggccagac ggactgaacc gatggcgcag cgcgccgtga ccggcaggca tgcaccgcgc
     8101 taggctgcgc tttccactca gatggacgtg ccgtgcgatg cctgccaagc gaaccgcacc
     8161 ttccgccgtt cccaggctgc tgtccggtgg caacccgcag atcgccaagg gcgagggcaa
     8221 tgccacggtg caggcctaca tcgcggcgat gccggactgg aaacgaccga tcggcgagcg
     8281 cctggatgcg ctgatcgagc aggccgtgcc cggcgtgcac aaggcggtga aatggaattc
     8341 gccaatgtat gcggcggccc cgggcgcagg ctggttcctc agcttccatt gcttcacgcg
     8401 ctacatcaag gtcgcgtttt tccgcggcgc cgcattgaag ccggtgccgc ccgagccgtc
     8461 cagaagcgcc gatacgcgct acctgcacct cccgcaggac ggcgtgctgg atgaagcccg
     8521 gttcctcgac tgggtgcggc aggcggccgc gttgcccggc gagcgcatgt aagcccgacg
     8581 tttcgattcc cctcccgacg agagcacctg atggccacac acgcgcccaa ccccgccgat
     8641 gccggaaccc cggcggccga actgatcgat gcacgcatca ccgaactggg cgactggcgt
     8701 ggcgagacgc tggcacgcgt gcgcgcgctg atccatgaag cgctgccgga ggtacaggaa
     8761 acctggaagt ggcgcggcac gccggtgtgg gaacacaacg gcatcctgtg taccggcgaa
     8821 acctacaagc aggcggtgaa gctgaccttc gccaacggtg cggcgttgac cgatccgaag
     8881 ggcctgttca acgccagcct ggacggcaac acgcggcgcg cgatcgacat ccatgaaggc
     8941 gcgatgccca atgccgccgc gttcaaggcg ctgctgcgcg aggcggccac gttcaa
//
LOCUS       DAOKIP010000165         8965 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.165,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000165 DAOKIP010000000
VERSION     DAOKIP010000165.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 8965)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8965)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8965
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.165"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            31..993
                     /gene="thiL"
                     /locus_tag="QEL58_003093"
     CDS             31..993
                     /gene="thiL"
                     /locus_tag="QEL58_003093"
                     /EC_number="2.7.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005415269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine-phosphate kinase"
                     /protein_id="HDS1677535.1"
                     /translation="MSLAEFALIDRIRARTLERDDILLGIGDDAALLQPRANEQLVVT
                     ADTLNSGVHFPVETPAFDIGWKTLAVNLSDLASMGARPAWCTLALSLPETSEDWIEAF
                     ADGFFALADQHDIALIGGDTTRGPLSLSVTAMGQVGRGQALRRDRAQVGDDLWVSGTL
                     GDAAGALKLWQQGALNVAAATLLADYEHLRLRLLRPTPRVTLGLRLRAFAHAAVDVSD
                     GLLADAGHIAARSGVAVHVDADMLPISPELRELLGREQARECALRGGDDYELCFTAAA
                     DQRDALMYLSQTLDLPLTRIGRIAEGQGVHVDGEAASGGYQHFV"
     gene            complement(1346..1717)
                     /locus_tag="QEL58_003094"
     CDS             complement(1346..1717)
                     /locus_tag="QEL58_003094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008267101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF805 domain-containing protein"
                     /protein_id="HDS1677536.1"
                     /translation="MHKMMTPLTRYAQFSGRASRSEFWWFQLFIVIISIPLYVLSFYA
                     GYTGSSTLALVVSGLSVVLWLAVIVPLIAVTVRRLHDTDRSGWWYLLMFVPVVSLVVL
                     VFLLLPSTPGGNRFGAPVPHV"
     gene            complement(1877..2590)
                     /locus_tag="QEL58_003095"
     CDS             complement(1877..2590)
                     /locus_tag="QEL58_003095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008267708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbria/pilus periplasmic chaperone"
                     /protein_id="HDS1677537.1"
                     /translation="MNLRACAAVLALAGASAVLPASAAVTLQGTRVIYDGSKGAVTVN
                     ANNRGDNVALVQVWLDDGDASAKAGSQKLPFVLTPTTRRIDAGHAQAFRLTYAPMAGA
                     ALPADRESLLYFNLLDIPPKPENVEGKNLLQFAVRTRVKLFYRPAGLPGHARDAAAAL
                     EWRVEGGALQLHNPTAYHVTLANLVLADGKTIEVDMVPPGERISLTVPKGATVPTTLK
                     FQWLDDYGTSRDAEAKIAR"
     gene            complement(2644..3156)
                     /locus_tag="QEL58_003096"
     CDS             complement(2644..3156)
                     /locus_tag="QEL58_003096"
                     /inference="COORDINATES: protein motif:HMM:NF012635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 fimbrial protein"
                     /protein_id="HDS1677538.1"
                     /translation="MKNLKTPMALAILLAAAPAVNAADLTITGDIKDTTCTAAITGGV
                     AIDMGSMDLEELKKNDRIGGRDLDVTVACPGASGSQDVAVKFGGVSTSDGGLSLTATS
                     TAKGVSYKIYDVAGDQLLINSAPARFVTVDGTTSQTIKHSVWYAKTGAADDTEAGTAV
                     ANAQMDIVYK"
     gene            3555..6008
                     /locus_tag="QEL58_003097"
     CDS             3555..6008
                     /locus_tag="QEL58_003097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008264905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial biogenesis outer membrane usher
                     protein"
                     /protein_id="HDS1677539.1"
                     /translation="MPAHARPGGEVEFSEGFASGFVGEDLARFSMGNPVEPGRYNVDI
                     HLNGEFVRRDDIDLVASDTPHVAQPCVPAHLLLALGLSDATRQAVEASETPDCVDVEA
                     VIEGARVRYGDSQLRLDISLPQVALQRQARGFVAPELRDHGITAAFLGYSVNHYRNQG
                     QQNTYAGITTGLNLGAWRLRHRSSLSHSPQGTHFTTLNSTLQRDLPRWNSQLTLGQAN
                     TGGELFDGVGFTGVRVATDERMLPDSLRGYAPVVRGVAQSNARVTIRQNGAVLYETTV
                     APGPFAIDDLYPNAGSGDLEVAVTEADGREERFTVAFSAVPQALREGSQRFSVTAGEL
                     RNTGLAQNALRFTEGTYARGVSNRMTLLAGVQVAEHYQAGLAGAAFNTPFGAIGADIT
                     HARANVPGLPAQSGRSYRLNYQRSVARTGTNLGLAAYRYSTEGFLTLTDVSQLSFDRP
                     QAADAFVMRTRQRFQVNFSQRIGQRSQLYVSGGHVAYWNRPGKQNDLQLGFHSSYRSA
                     NYTLSATRYRMVNGAPDTRLSLMLSVPLGRTANAPRATATYSDSRLGSQQQLGVNGNL
                     GEDRALSYSLSGNRGQGSSGYNAYASYQGSHADLSAGYSHANGSSSFNAGATGSVVLH
                     RGGINFGPSLGESFALVDAQGAQGAKVGSGRTVTVAGNGYAVLPYTSPYRWNQVQLDT
                     AALPLDVEVQASSQRVAPSAGSIVKVSFQTRNERLWLIDASDAEGQPLPYGAQIAHPD
                     GRVLGQVGQGGVVALRGLENNGLVHVQIEDGIACRLHYAMPETPDAHGQYWAKARCMA
                     PGPEGLADDVPPSTTGASQ"
     gene            6005..6514
                     /locus_tag="QEL58_003098"
     CDS             6005..6514
                     /locus_tag="QEL58_003098"
                     /inference="COORDINATES: protein motif:HMM:NF012635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 fimbrial protein"
                     /protein_id="HDS1677540.1"
                     /translation="MKTSHLVCAALLIAAAPLAHADSATITVTGKVLPGTCTISPTVD
                     VTLDDIDATDLKAGHDNGLKPAVLNFTTCVGVAGIDLTFDGTDDAAQGGHWKNLASTG
                     GATGVAVALLEGTAGNVFLKKTAKRSVVVNGAATAKFDMRTGYFRDASTPLTAGTVST
                     QITVTAAYK"
     gene            6529..7524
                     /locus_tag="QEL58_003099"
     CDS             6529..7524
                     /locus_tag="QEL58_003099"
                     /inference="COORDINATES: protein motif:HMM:NF012635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HDS1677541.1"
                     /translation="MKHLPVYSAQAGWKLSAAAGLLACLASAGAMACTGNGVGTANLT
                     ADLSSSDTPGTVTLLDGSATWMNNCDVPRPHPLELSLEGLGLTPVSTIDFRGKTYVTY
                     QLSANSPLFFFPINVKIQDPGISGGYELFPSAQGSITPVISYAGSTNSVLTYPYVGVV
                     ARHGMQSVPRTQLGTEVVQHTEYPYSIRHSIFVTVNVQQQTCRLSNTGFTLPDVTADA
                     LQSAGDTSSPRPFSVRMECTAAGVPVKLTLADANDPGATGSVLKPTANATAQGVQVEL
                     LSGDGKPVELLRQWDHGVSADGLQYITLGARYLRVPGALKVGAVEGQAVLTAEYR"
     gene            7536..7964
                     /locus_tag="QEL58_003100"
     CDS             7536..7964
                     /locus_tag="QEL58_003100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677542.1"
                     /translation="MASGSMEESAATSRSWMAMWAGNRAHSGTLLLVLLSACASAPAL
                     ACTGQHNRGADIHLTIDGWDDVEQDKVISSWLWAGNAGFLTGCTAGELIPFDLTSALP
                     GRALLPRGGHIPWWRGGRAGGDHRHLPIARTQSRKGEVTA"
     gene            7961..8962
                     /locus_tag="QEL58_003101"
     CDS             7961..8962
                     /locus_tag="QEL58_003101"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677543.1"
                     /translation="MMKIPFFSGIGHRCPLLVLLSCGVLAPGAAQACTSAHGGANTSI
                     RIDAWDDIDEGVVVSPWMHSGNASYLLGCNSSELIPVDVSAAMPGLEFVRNVTVDGET
                     FPAFGIRGKPKTPLLIFQYAVGNASGGSRFMPFNPLTGLQFSGAGWSGSTRWSWVRMA
                     AVSRGGEMEALPTTVVGEITYSTPSYPALVKKDNYNVTATLRTKTCRLTATAVTLQDV
                     DIADLPAEGSTAREREFTVPMNCNGAFPMYLALTDANAPGNTGSRLTPTGNATAGAVR
                     VQLLLEGNPVVLGQRWSVPMSQNGSQDVTLGARYYRETGTLHGGVVEGQAVITATYR"
BASE COUNT         1649 a         2947 c         2820 g         1549 t
ORIGIN      
        1 gcgcggcacg tacaacagcg ggaatgcccc atgtccctgg ccgaattcgc cctcatcgac
       61 cgcatccgcg cccgcaccct ggagcgcgac gacatcctgc tcggcatcgg tgacgacgct
      121 gcgctgctgc agccgcgtgc caacgaacag ctggtggtca ccgccgacac gctcaacagc
      181 ggcgtgcact tcccggtgga aacccccgcg ttcgacatcg gctggaagac gctggcggtc
      241 aatctgtccg acctggcctc gatgggcgca cgcccggcct ggtgcacgct ggcgctgtcg
      301 ctgccggaaa cctccgaaga ctggatcgaa gcctttgccg atggcttctt cgcgctggcc
      361 gaccagcacg acatcgcgct gatcgggggt gacaccacgc gcggcccgct gtcgctgtcg
      421 gtgactgcga tggggcaggt gggccgaggc caggcgctgc gtcgtgatcg cgcgcaggtg
      481 ggtgacgatc tctgggtgag tggcaccctg ggcgatgccg ccggcgcact gaagctctgg
      541 cagcagggcg cgctgaacgt ggctgccgcc acgctgctgg ccgactacga acacctgcgc
      601 ctgcgcctgc tgcggcccac gccgcgggta acactcggcc tgcgcctgcg tgccttcgca
      661 cacgcggccg tggatgtatc cgacggcctg ctggccgacg ccggccatat tgccgcacgc
      721 agtggcgtcg ccgtgcatgt ggatgccgac atgctgccga tctcgccgga gctgcgcgaa
      781 ctgctgggtc gcgaacaagc gcgcgagtgc gcgctgcgcg gcggcgacga ctacgaactg
      841 tgcttcaccg ccgccgcaga tcaacgcgat gcactgatgt acctgtcgca gacgctggac
      901 ctgccgctta cccgcatcgg ccgcattgcc gaagggcagg gcgtacacgt ggacggcgaa
      961 gccgccagcg gcggttacca gcacttcgtg tagaagcagc actacttgct cttgtgggtg
     1021 ccaaccatgg ttggcacgaa tgtgtcatgc caaggccatg ggctgcctgc aatctgcttt
     1081 ggtaggtgcc aaccatggtt ggcacgaagg tgtcacgcgt tcgaaccaac accgtgtcga
     1141 ccaaggtcga cacctaccaa agccatgagc tgtctgagtg ctgctctggt aggtgccaac
     1201 cttggttggc acgaatgtgt catgccaagg ccatgagctg cctgcgaact gctctggtag
     1261 gtgccaacct tggttggcac gaatgtgtcc ggcgtccgta ccaacaccgt gtcgaccaag
     1321 gtcgacacct accaaagcgc gggaattaca cgtgcggaac cggcgcgccg aaacggttgc
     1381 cgcccggggt gctcggcagc agcaggaaca ccagcaccac caggctcacc actggcacga
     1441 acatcagcag gtaccaccac ccggaccggt cggtgtcatg cagcctgcga acggttactg
     1501 caatcagcgg cacgatcacc gccagccaca gcaccacgct caacccgctg actaccagcg
     1561 caagcgtgct tgaaccggtg tagcccgcgt agaaactcag cacgtacagc gggatcgaaa
     1621 tgatcacgat gaacaactgg aaccaccaga actcactgcg gctggcacgc ccactgaact
     1681 gcgcatagcg ggtcagcgga gtcatcatct tgtgcatcgg cactctctca aaaaaggaag
     1741 cgcgcactat cgctgctggc gggacggtac tccatgcaac ttgttgcaat cgcaacgcga
     1801 atttctgtag agccgagccc acgctcggct gcctggcgca aagaaaaaag ccgagcatgg
     1861 gctcggctcc acatcttcaa cgggcgatct tcgcctcggc atcgcgcgat gttccgtagt
     1921 catccagcca ctggaatttc agagtggtcg gtaccgttgc gcccttgggc accgtcaggc
     1981 tgatgcgctc acccggcggc accatatcta cctcgatggt cttgccatca gccagtacca
     2041 ggttcgccag cgtcacgtgg taggcggtag ggttgtgcag ctgcaatgcc ccgccttcaa
     2101 cgcgccattc cagcgccgct gccgcatcgc gcgcatggcc cggcaggccg gcgggccggt
     2161 agaacagctt cacccgcgtg cgcacggcaa actgcagcag gttcttgcct tccacgtttt
     2221 ccggcttggg cggaatatcc agcaggttga agtacagcag cgattcgcgg tctgccggca
     2281 gcgctgcacc ggccatcggt gcataggtca gccggaacgc ctgcgcatgc ccggcatcaa
     2341 tgcggcgcgt ggtgggcgtc agcacgaacg gcagtttctg gctgccggcc ttggcgctgg
     2401 catcgccatc gtccagccac acctgcacca gggccacgtt gtcgccacgg ttgttggcgt
     2461 tcaccgtcac cgcgcccttg ctgccgtcgt agatcacccg cgtgccctgc agcgtcactg
     2521 ccgcagaggc cggaagtact gcggaagcgc cggccagtgc cagcaccgcc gcgcatgcgc
     2581 gaaggttcat ggaagtttcc tcgggaagga ccgcccggca gcacgccgcc gggcggtgtg
     2641 cgcttacttg tagacgatgt ccatctgcgc gttggcgacg gcagtgcctg cctcggtgtc
     2701 gtccgcagca ccagtcttgg cgtaccagac actgtgcttg atggtctgcg aggtggtgcc
     2761 gtcaacggtg acaaagcgtg cgggcgcgct gttgatcagc agctgatcgc cggcgacgtc
     2821 gtagatcttg tagctgacac ccttggccgt gctggtcgcg gtgaggctta ggccaccgtc
     2881 gctggtactg acgccgccga acttcacggc aacatcctgc gaaccactgg cacccggaca
     2941 ggcaacggtg acgtccaggt cacgaccacc gatgcgatcg ttcttcttca gctcttccag
     3001 gtccatcgag cccatgtcga tggccacgcc gccggtgatg gccgcggtgc aggtggtgtc
     3061 cttgatgtca ccggtaatgg tcagatcagc agcgttcacg gccggggcag cggccagcag
     3121 gatggccagc gccatcgggg tcttcaggtt cttcataggt gtgctcttca acaagtgatg
     3181 gaatcgggaa cgccacccgt catctgtgcg aagggtggcc ggtgcaggag gcgtgatgtc
     3241 tgtcgacaga tcccttgccg acgcaggacg aggcacaccc gtcttctgcc cggcgcatgt
     3301 tcggcccgat gcccgccgca gaccatacaa cttgttgcaa acgcccccat gccgcgaaaa
     3361 ctgcaactag ttgcatgttc gccagcagga ccgcgcccta gtctgcacgc ctcccatcac
     3421 taccggggct gcaccgcggc cccgtcgacg ccatgcgcct gacttcctct cccccccaaa
     3481 gcgccacgca gtattccctg cgccataccg cgctggctgt ggccatcagc accacgctgg
     3541 tgtttgcggt tgcgctgccg gcgcacgcgc ggccgggcgg cgaagtcgag ttcagcgaag
     3601 gcttcgccag tggcttcgtc ggcgaagacc tggcgcgctt cagcatgggc aacccggtcg
     3661 agccggggcg atacaacgtt gatatccatc tcaacggcga gttcgtccgc cgcgatgaca
     3721 tcgacctggt ggcctcggat acgccgcatg tcgcgcagcc ctgcgtgccg gcacacctac
     3781 tgctggcatt gggcctcagc gatgcaacgc gccaggctgt ggaagcgtca gaaaccccag
     3841 attgcgtcga cgtagaggcc gtgattgaag gcgcacgcgt gcgctacggc gacagccagc
     3901 tgcgcctgga catatcattg ccgcaggtcg cactgcagcg ccaggcgcgc ggcttcgtcg
     3961 cgccggaact gcgtgaccac ggcatcaccg ccgcattcct cggctacagc gtcaaccact
     4021 accgcaacca gggccagcag aacacctacg cgggcatcac cactggcctc aacctggggg
     4081 catggcggct gcgccaccgc agctcgctca gccacagccc gcagggcacg cacttcacca
     4141 cgctcaacag cacgctgcag cgcgatctgc cgcgctggaa cagccagctc acgctgggcc
     4201 aggccaacac cggtggcgaa ctgttcgacg gcgttggctt caccggtgtg cgcgtggcca
     4261 ccgacgaacg catgctgccc gattcactgc gtggctatgc gccagtggtg cgtggcgtgg
     4321 cacagagcaa tgcacgcgtc accatccgcc agaacggcgc ggtgctgtac gaaaccacgg
     4381 tggcgcccgg cccgttcgcc atcgatgatc tctaccccaa cgccggcagc ggcgatctgg
     4441 aagtagccgt caccgaagcc gatggccgcg aagagcgctt caccgttgcg ttctctgctg
     4501 tgccgcaggc actgcgcgaa ggcagccagc gtttcagcgt gaccgccggc gagctgcgca
     4561 ataccggcct ggcgcagaac gcgctgcgct tcaccgaagg cacctacgcg cgtggcgtca
     4621 gcaaccgcat gaccctgctg gccggcgtgc aggtagccga gcactatcag gccggactgg
     4681 ccggtgcggc gttcaacacg ccgttcggtg ccatcggtgc cgatatcacc catgcccgcg
     4741 ccaacgtgcc gggcctgcct gcgcagagcg gccgcagcta tcgcctgaac taccagcgca
     4801 gcgtggcgcg caccggcacc aacctgggcc tggccgcgta ccgctacagc accgaaggct
     4861 tcctcaccct caccgatgtg tcgcagctgt cgttcgaccg cccgcaggcg gccgatgcgt
     4921 tcgtcatgcg tacccgccag cgcttccagg tgaacttctc gcagcgtatc ggccagcgca
     4981 gccagctgta tgtcagcggc ggccacgtcg cctactggaa ccggccgggc aagcagaacg
     5041 atctgcagct gggtttccat agcagctacc gcagcgccaa ctacacactt tctgccacgc
     5101 gctaccgcat ggtcaacggc gcacccgata cgcgcctgtc gctcatgctg agcgtgccgc
     5161 tgggccgcac tgccaacgcg ccgcgtgcca ccgcaaccta cagcgacagc cgcctgggca
     5221 gccagcagca actgggcgtc aacggcaacc tgggcgaaga ccgtgcactg tcctacagcc
     5281 tgtccggcaa ccgcggccag ggcagcagcg gctacaacgc ctacgcaagc taccaaggca
     5341 gccatgccga tctcagcgcc ggttacagcc acgccaacgg cagcagcagc ttcaatgccg
     5401 gggccaccgg cagcgtggtg ctgcaccggg gcggcatcaa cttcggcccg tcgctgggcg
     5461 agagcttcgc gctggtggat gcgcagggcg cgcagggtgc aaaggtgggt agcggccgca
     5521 ccgttaccgt ggccggcaac ggctatgccg tgctgcccta taccagcccc taccgctgga
     5581 accaggtgca gctggatacc gccgcactgc cgctggatgt ggaagtgcag gccagctcgc
     5641 agcgcgtggc gcccagcgcg ggaagcatcg tcaaggtcag cttccagacc cgcaacgagc
     5701 gcctgtggtt gattgacgcc agcgatgccg agggccagcc gctgccctac ggcgcgcaga
     5761 ttgcccaccc cgatgggcgt gtgctgggcc aggtggggca gggcggtgtg gtggcgctgc
     5821 gtggcctgga aaacaacggc ctggtgcatg tgcagatcga agacggcatc gcctgccgac
     5881 tgcattacgc catgcccgag acccccgatg cacacggcca gtactgggcc aaagcccgtt
     5941 gcatggcgcc aggcccggaa gggctggccg acgatgttcc cccttcaact accggagctt
     6001 cccaatgaaa acttcgcacc tggtgtgtgc agcactgctg atcgccgccg cgccgttggc
     6061 tcatgccgac tcggccacca tcaccgttac cggcaaggtg ctgccgggta cctgcaccat
     6121 ctcgcccacc gttgatgtaa cgctggacga catcgatgcc accgatctga aggcagggca
     6181 tgacaacggc ctgaagccgg ccgtactcaa tttcaccact tgcgtaggcg ttgccggcat
     6241 cgatctgacc tttgacggca ccgacgatgc cgcgcagggc gggcactgga agaacctggc
     6301 aagcaccggg ggtgccactg gcgttgcggt ggcactgctg gagggaacgg ccggcaacgt
     6361 gttcctgaaa aagacagcga agcgaagcgt cgtggtcaat ggcgcagcca cagccaagtt
     6421 cgatatgcgc accggctact tccgcgatgc cagcacaccg ctcacggcgg gcacggtcag
     6481 cacgcagatc accgttacgg cggcctataa gtaactcgcg aggaaggtat gaaacatcta
     6541 ccggtgtact ctgcacaggc gggctggaaa ctgagcgctg ccgcgggcct ccttgcctgc
     6601 cttgccagcg ccggggcaat ggcctgcact ggcaacggcg tgggaactgc caacctgact
     6661 gccgatctca gctcgtctga cacgccgggc actgtcaccc tgctcgatgg cagcgcgact
     6721 tggatgaaca actgtgacgt gccccgcccg catcccctgg agctttcgtt ggaggggctg
     6781 ggcctaacgc ctgtgtccac tatcgacttc cggggcaaga cctatgtcac ctaccagctc
     6841 agtgccaact caccgctctt cttcttcccg attaacgtga agattcaaga tcccggcatc
     6901 tcgggtgggt atgagctctt tccgtcagcc caaggatcga tcacccccgt gatctcctat
     6961 gccggcagta caaacagcgt actgacatat ccttacgtgg gtgtcgtagc aaggcacggg
     7021 atgcaatccg ttccgcgaac ccagctgggt accgaagtag tgcagcacac ggaatatccc
     7081 tattcgatcc ggcatagcat ttttgtaacg gtgaacgtgc agcagcagac ctgccggctc
     7141 agcaataccg gattcacgct gcccgacgtt accgctgatg cattgcaatc agcaggagat
     7201 accagctcgc cacggccctt ctcggtgagg atggagtgca ctgctgcagg tgtgccggta
     7261 aagctgaccc tggccgatgc caacgacccc ggcgccaccg gaagtgtact caagcctact
     7321 gctaatgcga ccgcacaagg ggtccaggtg gaactgctga gtggtgatgg taagccggtg
     7381 gaactgctca gacagtggga ccatggtgtt tctgctgatg gtttgcagta catcactctg
     7441 ggagcgcgct acctgcgtgt gccaggtgca ctgaaagtag gcgcggttga gggacaggcg
     7501 gtgctgaccg cggagtaccg gtgacggtgg cggcagtggc cagcggcagc atggaggagt
     7561 ctgcagcaac atccagaagc tggatggcga tgtgggctgg caatcgcgcg cacagcggaa
     7621 ccctgctgct ggtattgctg agtgcttgcg cttcagctcc ggcattggca tgtaccggcc
     7681 agcacaatcg tggtgccgac attcatctca ccatcgacgg ctgggatgat gtcgaacagg
     7741 acaaggtcat ctccagctgg ctatgggcgg gaaacgcggg ctttttgacc ggctgtacgg
     7801 ccggcgaact catccccttc gatctgactt ctgcgctgcc tggccgcgcg ctactaccgc
     7861 gaggcgggca tattccatgg tggcgtggtg gaagggcagg cggtgatcac cgccacctac
     7921 cgatagcccg cacgcagagc agaaaaggtg aggtaactgc atgatgaaga ttccattttt
     7981 cagtggcatt ggccaccgct gcccactgct ggtgctgctc agctgcggcg tgctggcacc
     8041 gggtgcagcg caggcctgca ccagtgcaca tggcggggcc aataccagca tcagaatcga
     8101 tgcgtgggac gacatcgatg aaggtgtcgt cgtcagtccc tggatgcatt caggcaacgc
     8161 ctcctacctg cttggttgca actccagtga actgataccc gttgatgtct cagcggcaat
     8221 gcccgggctg gagtttgtcc ggaacgtcac tgtggatggt gagacctttc cggcgttcgg
     8281 aatccgcggc aagcccaaaa ccccgctgct gatctttcag tatgcggttg gcaacgccag
     8341 cgggggaagt cgtttcatgc ccttcaaccc gctgaccggt ctgcagtttt ccggtgccgg
     8401 ctggagcggc agcactcgct ggtcctgggt gcgcatggcc gcagtgtccc gcggcggcga
     8461 gatggaggcg ttgccgacca ccgttgtggg agagatcacc tattcgacac cgagctatcc
     8521 tgcgcttgta aagaaggaca actacaacgt taccgccacc ctgaggacca agacctgcag
     8581 actcacggct accgctgtca cgctgcagga tgtggacatt gccgatctac ccgccgaagg
     8641 cagcactgcc cgtgagcggg agttcactgt cccgatgaac tgcaacggtg cattcccgat
     8701 gtacctggca ctgaccgacg ccaacgcgcc gggcaacacc ggcagccgct tgacgcccac
     8761 cggcaacgcc acggctgggg ccgtacgcgt gcagctgctg cttgagggca atccggtggt
     8821 gctggggcaa cgctggtcag tgccgatgag ccagaacggt tcgcaggatg tgacgctggg
     8881 tgcgcgctac taccgcgaga cgggtacgtt gcacggcggt gtggtggaag ggcaggcggt
     8941 gattaccgct acctaccgct gaggc
//
LOCUS       DAOKIP010000166         8836 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.166,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000166 DAOKIP010000000
VERSION     DAOKIP010000166.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 8836)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8836)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8836
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.166"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            <1..577
                     /gene="pth"
                     /locus_tag="QEL58_003102"
     CDS             <1..577
                     /gene="pth"
                     /locus_tag="QEL58_003102"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011036110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HDS1677544.1"
                     /translation="AGLRLIVGLGNPGSEHARTRHNAGFHFVEALAEKAGARWNVDSK
                     LFGETAKVEIAGQTVWLLKPATFMNLSGKSVTAAQRFWKIEPEETLLAHDELDLAPGV
                     ARLKFDGGHGGQNGLRDTIRLLGHGKFHRLRVGIGHPGHKDRVVGWVLGRPSKDDDVL
                     IARAIDDAIDVMPLAVQGDFSEAMKRLHTPK"
     gene            718..1809
                     /gene="ychF"
                     /locus_tag="QEL58_003103"
     CDS             718..1809
                     /gene="ychF"
                     /locus_tag="QEL58_003103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000506572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="redox-regulated ATPase YchF"
                     /protein_id="HDS1677545.1"
                     /translation="MGIKCGIVGLPNVGKSTLFNALTKAGIAAANFPFCTIEPNVGIV
                     PVPDPRLNELAGIINPQKVIPTAVEFVDIAGLVAGAASGEGLGNKFLAHIREVDAITH
                     VVRCFENADVIHVNNKVDPISDIETIDTELALADLDSVEKALNRAERAAKGGDKEAAA
                     RKPVLAKLQAALSDGKSGRSVGLDEEEKALVRDLFLLTLKPVMYIANVLEDGFENNPH
                     LDAVRAHAAAEGAQVVPVSAAIEEELSQLDDEDRDTFLADLGLSEPGLNRVINAAYSL
                     LGLQTYFTAGVKEVRAWTVRKGATAPQAAAVIHTDFEKGFIRAETIAYDDFIKYKGEA
                     GAKEAGRLRLEGKEYRVQEGDVLHFRFNV"
     gene            2469..3107
                     /locus_tag="QEL58_003104"
     CDS             2469..3107
                     /locus_tag="QEL58_003104"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677546.1"
                     /translation="MVARSEKVGGSAAALECSEVIMLSAMRKWLRPEADFSESQGIYL
                     DAVDAADEEALIAYAALARICPGSSGRGANEERAFAERLARIASSFMLEGMLEPGSYV
                     LAEAAGGSGGGEAITVTSEHLLLLRSMNTRVLGRAVMLMDSKRPYGDMSHFYIDLARA
                     LGEPVPLDASGRVSFPPEVIARYDELHGQMLGVVRVFWRFAAPAQSGPEATL"
     gene            complement(3161..5899)
                     /locus_tag="QEL58_003105"
     CDS             complement(3161..5899)
                     /locus_tag="QEL58_003105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDS1677547.1"
                     /translation="MRRKAMAWSIQLALMGVAASAAAQAPASSSVQQLDAVQVTGSRI
                     PRAQVEGPAPITVISAEQIRSSGFTTVPDVLRSMTQNGGETQSQQSSSGADFSPGAQQ
                     VDLRGLGPNHTLVLVNGRRIADFPMPFKGRSNFTDVSNIPLGMIERIEVLTGSASAIY
                     GSDAIAGVVNFILKKKADGTTIDMRMGTTSEGGGESFDMSLASGFSRGNFNAVYSVEL
                     QSQTPLWAYERDIQDSTQDGPTEGSRIARRAYLRTDYNDDYLDPGAATCEALAGQNQG
                     STYRAFRPKYGYYCGSDASIGYGTILSKRRGANGYASLSYDFDNGQQWFADVQLGYHT
                     MSLMRDVTKWGRMDANGDESGYFNNQATGEIEFWQRQFSPEEMGGLRNAMVRSTQKTF
                     SVTTGFKGNLAGNWDYEAALSHSQYQSRISWAQIIAAKANDLFLGPQLGVDDDGFPIY
                     NADPSRLYRPLTRAEYDSIAARTTYSPKSRTETAAFTVTNSALFGLPGGDAGFAATVE
                     VGQQAYALNPDPLATQYYYYSWKDSDGQGSRNRWATAAELRMPLHETVNLSVAGRYDQ
                     YRYSGHTIGKATWSGGLEWRPIDTLLVRGSYGTAFRAPDLHYVFAGPGNDETSAEDLY
                     SCRLEGASDCSDYERNLIRSRTGNRQLDPETSTSWSAGFVWSPAIGLDLSVDWFDIDM
                     RKQVQDMDVRTILANEANCRLGSADVNSPTCVDALDRITRTSDGRLYGVRVAPINVAR
                     ESTSGIDVGLRYRLQTAIGDFILNGTHTWVKKHDFQRYPGDPTLDQFAVNSGFDIPRT
                     KTSLSVTWEKDAWSATVYGSRLGKLPTSDNYDQVFKWDSGDSPYVKATYRYNASLQYR
                     FDDHSRLSLSVVNVFNKMPPKDATYTAYPYYDVSWFDSVGRTINLQYTHKFGGSAL"
     gene            6070..7089
                     /locus_tag="QEL58_003106"
     CDS             6070..7089
                     /locus_tag="QEL58_003106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005408200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyanophycinase"
                     /protein_id="HDS1677548.1"
                     /translation="MRRLLRALRGPFVWLACLVLAWPLATPAQDLQSPGFAYYEVGDL
                     EAPRPGPRAPAMMLMGGGEWVPEAFQWWLRQAGNGRVLILRASGRDELQDRLYREIGG
                     TTAVQTLVFDSRRGADDPAVLRVVAAADAIFIAGGDQSRYIRFWKGTALNRALNAHVR
                     AGKPIAGTSAGLAILGGYAYGALDGGSISSAGALADPMGSAVTMDSGFLQMPYLQRVV
                     TDTHFDKRDRLGRLIVFVARAAQDSGDPDIVGIGVDEDTALCVEPDGQAQVYSADGEG
                     KVWVVSPGRDADRLVEGEPLRFHAVPVTVVGSGSRMRLDDFEAEADYQAVADVSDGEI
                     DVVRQ"
     gene            7166..8182
                     /locus_tag="QEL58_003107"
     CDS             7166..8182
                     /locus_tag="QEL58_003107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019338148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoaspartyl peptidase/L-asparaginase"
                     /protein_id="HDS1677549.1"
                     /translation="MKLRLALSALLSLPLLAQAAPATSPLLVIHGGAGVERKDLSPAE
                     EKAAREALRAALLKGHAELAAGRPALAAVTAAITVLEDDPTFNAGKGAVFTHDGHNEL
                     DAAVMDGASQAAGAVAGVQRVRNPIQLAQTVMQKSRHVMMVGQGAEAFAVEQGIPLVD
                     PSYFRTDKRWRQLQRALKEEASGQAHADLETAKHFGTVGAVALDAQGHLAAGTSTGGM
                     TNKRYGRVGDSPIIGAGTWADARCAVSGTGWGEYYIRTAAAHEICARMRYQGQTPEQA
                     GKGVINEAIPQMGGDGGAIVLAADGKMATPFNTQGMYRGWIGADGVPHVAIFASETLP
                     VPGQ"
     gene            8320..8405
                     /locus_tag="QEL58_003108"
     tRNA            8320..8405
                     /locus_tag="QEL58_003108"
                     /product="tRNA-Tyr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:8354..8356,aa:Tyr,seq:gta)
     gene            8430..8503
                     /locus_tag="QEL58_003109"
     tRNA            8430..8503
                     /locus_tag="QEL58_003109"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:8462..8464,aa:Gly,seq:tcc)
     gene            8553..8628
                     /locus_tag="QEL58_003110"
     tRNA            8553..8628
                     /locus_tag="QEL58_003110"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:8586..8588,aa:Thr,seq:ggt)
     gene            8670..>8836
                     /gene="tuf"
                     /locus_tag="QEL58_003111"
     CDS             8670..>8836
                     /gene="tuf"
                     /locus_tag="QEL58_003111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003486726.1"
                     /note="EF-Tu; promotes GTP-dependent binding of
                     aminoacyl-tRNA to the A-site of ribosomes during protein
                     biosynthesis; when the tRNA anticodon matches the mRNA
                     codon, GTP hydrolysis results; the inactive EF-Tu-GDP
                     leaves the ribosome and release of GDP is promoted by
                     elongation factor Ts; many prokaryotes have two copies of
                     the gene encoding EF-Tu; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HDS1677550.1"
                     /translation="MAKGKFERTKPHVNVGTIGHVDHGKTTLTAALTKIGAERFGGEF
                     KDYSSIDAAPE"
BASE COUNT         1567 a         2796 c         2932 g         1541 t
ORIGIN      
        1 ggcaggactg cgactgatcg tcggtctggg caaccccgga tcggaacacg cccggacccg
       61 gcacaatgcc gggtttcatt tcgttgaggc cctggctgaa aaggccggtg cgcgatggaa
      121 tgtggacagc aagctgttcg gtgagaccgc taaggtcgag atcgccgggc agacggtgtg
      181 gctgctcaag cccgccacct tcatgaacct cagtggcaag tcggtcaccg ccgcccagcg
      241 gttctggaag atcgagccgg aggaaaccct gctggcccat gacgaactgg acctggcgcc
      301 cggcgtggcg cggctgaagt tcgacggtgg ccatggtggc cagaacggcc tgcgcgacac
      361 catccggttg ctcggccacg gcaagttcca tcgcctgcgc gtgggcatcg gccatcccgg
      421 ccacaaggac cgcgtggtgg gttgggtgct gggacgcccg tccaaggacg atgacgtgct
      481 gatcgcacgc gccatcgacg atgccatcga cgtaatgccg ctggcggtac agggtgattt
      541 cagcgaagcg atgaagcggc tgcacacccc gaaataaacg gtaggtaccg accgttggtt
      601 ggtacggaaa caggcggccg gtaggtaccg accgttggtc ggtacggaga atgattggaa
      661 aagcagcacc catgccgctg ctttcccaat cactttcacc ccagagagct gtcacccatg
      721 ggtatcaaat gcggcatcgt cggcctgccc aacgtcggca agtcgaccct gttcaacgcg
      781 ctgaccaagg cgggcatcgc cgcggcgaac ttcccgttct gcaccatcga gccgaacgtc
      841 ggcatcgtgc cggtgccgga cccgcgcctg aacgaactgg cgggcatcat caacccgcag
      901 aaggtcattc cgaccgcggt cgagttcgtt gacatcgccg gcctggtggc cggcgccgcc
      961 agcggtgaag gcctgggcaa caagttcctg gcgcacatcc gcgaagtcga tgcgatcacc
     1021 cacgtggtgc gctgcttcga gaacgccgac gtcatccacg tcaacaacaa ggtcgacccg
     1081 atctcggaca tcgaaaccat cgataccgag ctggccctgg ccgacctcga cagcgtcgag
     1141 aaggcgctga accgcgccga gcgcgccgcc aagggcggcg acaaggaagc ggccgcgcgc
     1201 aagccggtgc tggccaagct gcaggcggcg ctgtccgacg gcaagtccgg ccgttcggtc
     1261 ggcctggacg aagaagagaa ggcgctggtc cgtgacctgt tcctgctgac cctgaagccg
     1321 gtgatgtaca tcgccaacgt gctggaagat ggtttcgaga acaatccaca cctggacgcc
     1381 gtgcgcgccc acgccgccgc cgaaggcgcg caggtggtgc cggtgtcggc cgcgatcgaa
     1441 gaagagctgt cccagctcga cgacgaagac cgcgacacct tcctggccga cctcggcctg
     1501 agcgagccgg gcctgaaccg cgtgatcaac gcggcctaca gcctgctcgg cctgcagacc
     1561 tacttcactg ccggcgtgaa ggaagtgcgc gcgtggaccg tgcgcaaggg cgccaccgcc
     1621 ccgcaggccg ccgcggtcat ccataccgac ttcgagaagg gcttcatccg cgctgaaacc
     1681 atcgcgtatg acgacttcat caagtacaag ggcgaagctg gcgccaagga agccggtcgc
     1741 ctgcgccttg aaggcaagga ataccgcgtg caggaaggcg acgtgctgca cttccgcttc
     1801 aacgtctgat ccagcggcat cggatcgact ccggacgccc cgccttgtgc ggggcgttcg
     1861 cgtttccggt atcggtttcg ggcgtggaca aaaattgacc atgctccgga acggctgcgg
     1921 tgcaaggctc gcacgcactt gtccacacca aacccccacc gctttccacg cccaatgtgg
     1981 aaaaccgtgg ggtcggatcc ctttccgcag gaaagagctc cgaccccgat cagtgcggtc
     2041 gaatcgtgga caaaaattca ccgcgcctca aaacgcctgc ggcgcaatgc tcgcacccac
     2101 ttgtccacat caagttccca ccgctctcca cgtcccgtgt ggaaaacaat cacggtgatg
     2161 gacaaaaaat caccacgccc ggaaacgccc gcactgcaag cctcgcggcc acttgtccac
     2221 accaagttcc catcgctttc cacgcgtggt gtggaaaacc cacatgccat ggcagccatc
     2281 aatttcggat tcattgcatg tagcactgga tggtgttgct tcagactatc ggctgaccct
     2341 tccactcata cgggcgcgcg atgtcatgcc tgcgcgctat ccggagaatc tccatggcac
     2401 cccgagcgta ctggtgggta gttgtgatcc atctcgtcgg cctccttctg gcttatggat
     2461 atcgatccat ggtcgcgcga tccgagaagg tcggaggaag cgcggcagca ctggagtgca
     2521 gtgaggtcat catgctgagt gcaatgcgca aatggctgcg gcccgaagcg gacttcagcg
     2581 agagccaggg tatctacctg gacgccgtcg atgctgcaga tgaggaagcg ctgatcgcct
     2641 acgcagcatt ggctcgcatc tgccctgggt catctgggcg aggcgccaac gaggaaaggg
     2701 cctttgccga acggctcgcc cggatcgcat ccagtttcat gctggagggc atgcttgagc
     2761 ccggcagcta tgtgctggcc gaggccgcag gtggctccgg cggcggcgaa gcgatcaccg
     2821 tgacatcgga gcatcttttg ctgctgcgaa gcatgaacac ccgggtgctg gggcgggcgg
     2881 tgatgctcat ggacagcaag cgcccgtacg gggatatgtc gcacttctac atcgacctgg
     2941 cccgcgcgct gggggagccg gttccgctgg atgcaagcgg cagagtatcg ttcccgccgg
     3001 aggtcatcgc ccggtatgac gagttgcatg ggcagatgct gggcgtggtg cgcgttttct
     3061 ggcgctttgc agcgccggcg cagtcggggc ctgaggcgac tctgtaaaaa aagacggagg
     3121 cttgcgcctc cgtccttcct gcatccagta cagcccgcgc ttacagcgcg ctgccgccga
     3181 acttgtgggt gtactgcaga ttgatcgtgc ggccgacgct gtcgaaccag gacacgtcgt
     3241 agtacgggta cgcggtgtac gtggcgtcct tcggcggcat cttgttgaac acgttgacca
     3301 ccgacagcga caggcgcgaa tggtcgtcga agcggtactg cagcgacgcg ttgtagcggt
     3361 aggtcgcctt cacgtacggg ctgtcaccgc tgtcccactt gaacacctgg tcgtagttgt
     3421 ccgaggtcgg cagcttgccc aggcgcgagc cgtagaccgt ggccgaccag gcgtccttct
     3481 cccaggtaac gctcaggctg gtcttggtgc gcgggatgtc gaagccgctg ttgaccgcga
     3541 actggtccag ggtcgggtcg cccgggtagc gctggaaatc atgcttcttc acccaggtgt
     3601 gggtgccgtt gaggatgaag tcgccgatcg cggtctgcag gcggtagcgc aggcccacgt
     3661 cgatgccgga ggtggactcg cgggcgacgt tgatcggcgc cacgcgcacg ccatacaggc
     3721 ggccgtcgct ggtacgggtg atgcggtcga gcgcatccac gcaggtcggc gaattgacgt
     3781 cggcgctgcc caggcggcag ttcgcttcat tggccaggat cgtgcgcacg tccatgtcct
     3841 gcacctgctt gcgcatgtcg atgtcgaacc agtccaccga caggtccagg ccgattgccg
     3901 gcgaccagac gaagccggcg ctccacgacg tgctggtttc cggatccagc tggcggttgc
     3961 cggtgcggct gcggatcagg ttgcgctcgt aatccgaaca gtcgctggcg ccctcgaggc
     4021 ggcagctgta caggtcttcg gcgctggtct cgtcgttgcc cgggccggcg aacacgtagt
     4081 gcaggtccgg tgcacggaac gcggtgccat acgaaccacg caccagcagg gtatcgatcg
     4141 ggcgccattc caggccgccg ctccaggtgg ccttgccgat ggtatggccc gaatagcggt
     4201 actggtcgta gcgaccagcc acgctcaggt tgaccgtctc gtgcagcggc atgcgcagct
     4261 cggccgccgt ggcccagcgg ttgcgcgaac cctggccgtc cgagtccttc cagctgtagt
     4321 agtagtactg ggtggccagc ggatcgggat tcagcgcgta ggcctgctgg cccacttcca
     4381 cggtcgcggc aaagccggca tcgccgcccg gcaggccgaa cagggccgag ttggtcacgg
     4441 tgaacgcggc cgtctcggtg cgcgacttcg gcgagtacgt ggtgcgtgcg gcaatcgaat
     4501 cgtactcggc gcgggtcagc ggccggtaca ggcgcgacgg gtcggcgttg tagatcggga
     4561 agccgtcatc gtccaccccc agctgcggac cgaggaacag gtcattggcc ttggcggcga
     4621 tgatctgcgc ccagctgatc cgcgactggt actgggagtg gctcagcgcc gcctcgtagt
     4681 cccagttgcc ggccaggttg cccttgaagc cggtggtcac gctgaaggtc ttctgcgtgc
     4741 tgcgcaccat cgcgttgcgc aggccgccca tttcctcggg cgagaactgg cgctgccaga
     4801 attcgatttc gccggtggcc tggttgttga agtagcccga ctcgtcaccg ttggcatcca
     4861 tccggcccca cttggtgacg tcgcgcatca gcgacatcgt gtggtaaccc agctgcacgt
     4921 cggcgaacca ctgctggccg ttgtcgaagt cgtagctcag cgacgcatag ccattggcgc
     4981 cgcggcgctt gctgaggatg gtgccgtagc cgatcgacgc gtcgctgcca cagtagtagc
     5041 cgtacttcgg gcggaaggcg cggtaggtgc tgccctggtt ctgcccggcc aatgcctcgc
     5101 aggtagcggc gcccgggtcc aggtagtcgt cgttgtagtc ggtgcgcagg taggcgcggc
     5161 gcgcgatgcg cgagccctcg gtggggccgt cctgggttga atcctggatg tcgcgctcat
     5221 aggcccacaa cggggtctgc gattgcagct caacgctgta cacggcgttg aagttgccgc
     5281 ggctgaagcc gctggccagg ctcatgtcga acgactcgcc accgccctcg ctggtggtgc
     5341 ccatgcgcat gtcgatcgtg gtgccgtcgg ccttcttctt caggatgaag ttgaccacgc
     5401 cggcgatcgc gtcggagccg tagatggccg aagcgctgcc ggtcagcact tcgatgcgct
     5461 cgatcatgcc aagcggaatg ttggagacgt cggtgaagtt gctgcggccc ttgaacggca
     5521 tcgggaagtc ggcgatgcga cggccattga ccagcaccag cgtgtggttc gggccaaggc
     5581 cgcgcaggtc cacctgctgg gcgcccggcg agaagtcggc gccgctggac gattgctggc
     5641 tctgggtctc accgccgttc tgggtcatcg accgcagcac atccggcacg gtggtgaagc
     5701 cgctggaacg gatctgctcg gcgctgatca ccgtgatcgg ggcgggacct tccacctggg
     5761 cgcgcggaat gcgcgaaccg gtgacctgca ccgcatccag ttgttgaacc gaagaggaag
     5821 ccggtgcctg ggccgccgcg gaagcagcca cgcccatcaa cgccagctgg atcgaccacg
     5881 ccatcgcctt tctacgcatg aggaattctc gaaaatgaag ccggcccgca gaggaggggc
     5941 cctgtccccc attcagattt ccggaatggg cgcgcgcatt taacgccttt tttatgtcct
     6001 tgactactgg cttcctatct ggcaaagagt gaaaacgctt gcaagtcgat tttgttcagg
     6061 gagatcaaga tgcgacgcct cctccgcgcc ctgcgagggc ccttcgtctg gctggcctgc
     6121 ctggttctgg cctggccgct cgccaccccg gcgcaggatc tgcagagccc cggcttcgcc
     6181 tactacgaag tgggggacct ggaggcgccg aggcccggac cgcgcgcgcc ggcgatgatg
     6241 ctgatgggcg gcggcgaatg ggtgccggag gcattccagt ggtggctcag gcaggccggc
     6301 aatggccgcg tgctgattct gcgtgcctcc ggccgcgacg aactgcagga ccgcctgtac
     6361 cgggagatcg gcggtaccac tgcggtgcag accctggtct tcgacagtcg ccgcggcgcc
     6421 gacgatccgg ccgtgctgcg ggtggttgca gcggccgatg ccatcttcat cgccggcggt
     6481 gaccagtcgc gttacatccg cttctggaag ggcaccgcgc tcaaccgcgc gctcaacgcc
     6541 cacgttcgcg ctggcaagcc gatcgccggt accagcgcag gcctggccat ccttggcggc
     6601 tatgcctatg gcgcgttgga cggaggcagc atcagctccg ccggtgcgtt ggccgacccg
     6661 atgggcagcg cggtcaccat ggacagtggc ttcctgcaga tgccctacct gcagcgggtg
     6721 gtcaccgaca cccacttcga caagcgcgat cgccttggcc gcctcatcgt gttcgtggcc
     6781 cgtgccgcgc aggacagtgg cgaccccgac atcgtcggta tcggcgtcga cgaggacacg
     6841 gcgctgtgcg tggagccgga tggccaggcc caggtctaca gcgccgacgg cgagggcaag
     6901 gtgtgggtgg tcagccccgg gcgtgatgcc gaccgcctgg tcgaaggcga gccgctgcgc
     6961 ttccatgccg tgccggtgac ggtggtcggc agtggcagcc gcatgcggct ggatgacttc
     7021 gaggccgagg ccgactacca ggccgtcgcc gacgtcagcg acggcgagat cgacgtcgtg
     7081 cgccaatgat gctcctttcc gctcgtgccg gccgctggcc atgacccccg caatccattc
     7141 attcgtcctg ctggaaacgt acccgatgaa actgcgtttg gcgctgtccg cgctgctgtc
     7201 cctgcccctg cttgcccagg ctgcaccggc cacttcgccg ctgctggtca tccatggcgg
     7261 cgccggtgtc gagcgcaagg acctgtcgcc ggccgaagag aaggccgcac gcgaagcgct
     7321 gcgcgccgcg ctgctgaagg ggcacgccga gctggcggcc ggacgcccgg cattggccgc
     7381 ggtcaccgcg gcgatcaccg tgctggagga tgacccgacc ttcaatgccg gcaagggcgc
     7441 ggtgttcacc catgacggcc acaacgagct ggacgcagcg gtaatggatg gcgcaagcca
     7501 ggcggcaggg gctgtggccg gtgtgcagcg ggtgcgcaac ccgatccagc tggcgcagac
     7561 cgtgatgcag aagtccaggc acgtgatgat ggtcgggcag ggtgccgaag ccttcgcagt
     7621 tgagcagggc atcccgctgg tggacccgtc gtacttccgc accgacaagc gctggcggca
     7681 gctgcagcgg gcgttgaagg aagaggccag cggccaggca catgccgacc tggagaccgc
     7741 gaagcacttt ggaaccgtgg gcgcggtcgc gctggatgcg caggggcacc tggccgccgg
     7801 cacctccacg ggcggcatga ccaacaagcg ctacggacgc gtgggcgact cgccgatcat
     7861 cggcgccggc acctgggccg atgcccgttg cgcggtgtcg ggcaccggct ggggcgagta
     7921 ctacatccgc accgccgccg cgcatgagat ctgcgcacgc atgcgctacc aggggcagac
     7981 accggagcag gccggcaagg gcgtgatcaa cgaggcgatt ccgcagatgg gcggcgacgg
     8041 tggtgcgatc gtgctggccg cagacggaaa aatggccacg ccgttcaaca cccagggcat
     8101 gtatcggggc tggatcggcg ccgatggtgt accccatgtc gcaattttcg ccagcgagac
     8161 cctgccggtc ccagggcaat aaccttgcgt atcaatgggt ttgcgacaac gtgtgaaaaa
     8221 gatggaaaaa agcgttgaca ggcccccgtc tcatcagcag aataagcggc tcaccaccac
     8281 acaccgcaac gcttcggcgg caacggaatg gggtggtaag gagggatacc caagcggcca
     8341 acgggggcag actgtaaatc tgctggctta cgccttcggt ggttcgaatc cacctccctc
     8401 caccagtttc acgttgtgac attcccggcg cgggagtagt tcaatggtag aacctcagcc
     8461 ttccaagctg atggtgcggg ttcgattccc gtctcccgct ccattgaatg aactttgaat
     8521 attatcgagt tcatgtcata atgcaaaact cggctcacgt agctcagtcg gtagagcact
     8581 tccttggtaa ggaagaggtc gaaggttcga ttcctttcgt gagcaccatc ttaagcatca
     8641 cctctcagac gaattcgaga taagcagcca tggccaaggg taagttcgag cgcaccaagc
     8701 cgcacgtcaa tgtcggcacc atcggtcacg tcgaccacgg caagaccacg ctgaccgccg
     8761 cactgaccaa gatcggtgcc gagcgcttcg gtggcgagtt caaggactac tcctcgatcg
     8821 acgccgcgcc ggaaga
//
LOCUS       DAOKIP010000167         8773 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.167,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000167 DAOKIP010000000
VERSION     DAOKIP010000167.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 8773)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8773)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8773
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.167"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(22..3078)
                     /locus_tag="QEL58_003112"
     CDS             complement(22..3078)
                     /locus_tag="QEL58_003112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005417628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDS1677551.1"
                     /translation="MMHTTFRTPARRLLSTALVSCLMLAAAPNVMAQSANASLRGQVA
                     GAQAGTEVTATNVATGTVRRGTIRADGSYSLMGLDPGTYDVVANGQSQKVTVTVASTA
                     TLNFAGAASSTPGSTAATNLDTVNVVAPTLLQEVRTSEVGKTVSLQQIQTTPQVSRNF
                     LEFADAVPGMIFTRDAKGNTSLRGGATNADGTNVYIDGVGQKSYVKGGGVAGQSGSAG
                     NPFPQLAIGEYKVITGNYKAEYGQVSSAAVTAATKSGTNEFKGEAFYRYTDEDMRAMT
                     PAERQPNKSKMVSAEKEYGFALGGPIIQDKAHFFVTYEAKRFDLPVTIAPHGAVTSKA
                     DRVPADAQAGLGPASQPFQQDLIFGKIDFEPTDNDRLELTFQDRDETQQQFSDQTAPM
                     HGKETKNTDRRYALRWNHSGERYYNELMVTHEDSFNNPKPLSMGNGFNYTAPDGANEE
                     RPIVSIGGSSAMSSQVKGQKGWSIEDNLTLDGIQWAGDHTIKMGAKYKQIDLYASDAA
                     QINPQFYYTIDNPTFPDSIPYKAQFVKPVTGVSGVSGEVRSKVKQIGLFIQDDWQVND
                     HLQLNLGLRWDYEKNPSYLDFVTPPEVVNALFAQDPRAAAGQSYADTLALSGLNINDY
                     ISNGHNRKAFKDAWQPRLGFSYDINADEQHVIHGGAGRSYDRDLFDYLQLETTKLALP
                     QPTIYFRNPATGQCFQGNAACYDWNPNLLNGIGNLQSLVGSTSNAGLEVDLLNNNLKV
                     PYADQFSLGMSNQIGEWLTDATISRTLTYDGFAFTLGNRYPTGNFFDDPRLCGGTQAG
                     LGQAWSCNVPGFGSLIIGQQGIKTRATQILLSAQKPFTQESGWGTSIAYTWTTARHNR
                     DINEHYAFDRGVIGDYPTIRSNGAPRHRLVVTGSYAGFWGITFGGKLTLATPTAINDW
                     YGVPQANGFDLPTPMAAVPGGNGRFLLGGKIFGYRSVDLQATKTFKMPGDTELYARID
                     IINVFNFDNFSNYNYYKNGKLTASYNETGDIVGTPRQVKAEVGFRF"
     gene            complement(3155..4192)
                     /locus_tag="QEL58_003113"
     CDS             complement(3155..4192)
                     /locus_tag="QEL58_003113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012480808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HDS1677552.1"
                     /translation="MEGGFVNKAAITIKDVAREARVSVATVSRALNGHENVAEPVRQL
                     VLEVAARLRYTPHAAARSLSSRRTNTVGVVLPDLYGEFFSELMRGIDNVARNRRQHLL
                     VSSYHGDQEQQGAALRAMRGRVDGLLVLSPYAESPGFLTDNLPQSLPTVLINTYLPGQ
                     DHPVLSIDDHAGAMAMTRHLLDAGHRRIAFISGPDLNFDARERLRGFRDALAAFGSGA
                     EGIELPGDFDEASGHRAGQELLAAGALPDAVFAANDMMALGCLYAFTQAGVHVPSDVA
                     LAGFDDIPLARFVHPSLTTMQVSIAELGDRAMTRLMQLMDGTSTDGTGDKQTLVPRLI
                     VRDSTTPPSGR"
     gene            complement(4342..4593)
                     /locus_tag="QEL58_003114"
     CDS             complement(4342..4593)
                     /locus_tag="QEL58_003114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010486717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BolA family transcriptional regulator"
                     /protein_id="HDS1677553.1"
                     /translation="MRAALQQALAPSVLEIEDDSHRHAGHAGARDGRGHFNVHVVSER
                     FAGLGPLARHRAVYAALGSMMDTDIHALSIRAQTPSEQG"
     gene            complement(4614..4913)
                     /locus_tag="QEL58_003115"
     CDS             complement(4614..4913)
                     /locus_tag="QEL58_003115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014503597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HDS1677554.1"
                     /translation="MWYVIEGYDGQDVLAQRLQARPEHLARLHALRDEGRLLLAGPCP
                     AVDSEDPGPAGFSGSVVIAQFESLVQAQAWADADPYVAAGVYTRVQVRPFRKVLP"
     gene            5290..6195
                     /locus_tag="QEL58_003116"
     CDS             5290..6195
                     /locus_tag="QEL58_003116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="segregation/condensation protein A"
                     /protein_id="HDS1677555.1"
                     /translation="MTSELALDANPPTRPPAPQQQEMPLAVVHGQPVLQIPQDLYIPP
                     DALEVILDAFEGPLDLLLYLIRRQNLDVLDIPVAEITRQYVEYITVMRELRFELAAEY
                     LVMAAILAEVKSRMLLPRPVSEEGDEADPRAELVRRLQEYERFKQAAEDIDALPRQDR
                     DTSLAHAFMPERATVKLPPPVDLKEMLLALHDVLKRAELFSGHAIKREALSVRQRMGE
                     VLGRLEDGKFYRFEGLFTAEEGKLGVLVTFLAVLELAKEQLLDIVQEEPLAPIYVKSL
                     AAGNTNAPLQFSSEFDDNDAANADE"
     gene            6209..7084
                     /gene="scpB"
                     /locus_tag="QEL58_003117"
     CDS             6209..7084
                     /gene="scpB"
                     /locus_tag="QEL58_003117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019336635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMC-Scp complex subunit ScpB"
                     /protein_id="HDS1677556.1"
                     /translation="MDQSLIDRIVEGALLASSQPLTLAQLKDLFPEEEPAPPGSIERA
                     LERLREACAGRGVELVEVASGFRYQVTGEVHGWISRLWTERKTRYTRATLETLALIAY
                     RQPITRGEIEQVRGVAVSSNIIQALEEREWIRVVGHRDVPGKPALFGTTKGFLDYFGL
                     KRLDELPPLSELKDLGELDPQLALDRDVPAAAGADGPDISAGADGAAANDDAGISGSD
                     TPDSADAAPASASDEQAPSPFDDGHPDSAPGERAVPVNEREDNAVAMTTVAVDQADSE
                     PEADLETVGRSKTDE"
     gene            7077..8726
                     /locus_tag="QEL58_003118"
     CDS             7077..8726
                     /locus_tag="QEL58_003118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA pseudouridine synthase"
                     /protein_id="HDS1677557.1"
                     /translation="MSDTPRKLSLNKLSLKREATSEQFKLEERLHKVLAQAGLGSRRA
                     LEQRIAEGLIKVNGEVAQTGMSVKSGDKIEMDGRGFVATALAEPSRVLVYNKPEGEVT
                     TREDPEGRPTVFESLPPLKGARWIAIGRLDINTTGLLLATTDGELANAMMHPSFEVER
                     EYVVRVRAPEGEEKVSDAIVDRLSRGVALEDGPAKFDEIERIGGTDSHDWFRVVVKEG
                     RNREVRRLWESQGCQVSRLKRTRYGKVSLPRELARGHSVELGTAQVEALRAQLKLEEG
                     APSALTLQPVIGQRRAAKTTVRVREGGRGNAYVNGHNTADEGRELRRFDNVREDRGRG
                     RGGKGGGFKGGLTVSGEAAAKQSQKPFKQRAQKNDRSLPEGNPAAFRTWYVPDGVSTG
                     PSGHRNAGPGARGPGARGPGAGGQGRPYGKPKGPGAGAGGGQGRGGFGGEGRGGAGGQ
                     GRPAGAGNRSQGQGNKHPYGHPGNAPSFPSDHATPGFNPYGSPKPAHGARPGGRGPGG
                     GNNRGPGGNRGPGGPGGNRGPGGPGGNRGPGGPRRSGPRGG"
BASE COUNT         1456 a         2837 c         3005 g         1475 t
ORIGIN      
        1 tactgctgca ggctggaccg cttagaagcg gaagcccact tcggccttca cctggcgcgg
       61 cgtaccgacg atgtcgccgg tctcgttgta gctcgcggtc agcttgccgt tcttgtagta
      121 gttgtagttc gagaagttgt cgaagttgaa cacgttgatg atgtcgatac gcgcatacag
      181 ctcggtatcg cccggcatct tgaacgtctt ggtggcctgc aggtcgaccg agcggtagcc
      241 gaagatcttg ccacccagca ggaaccggcc attgccaccc ggaaccgccg ccatcggcgt
      301 cggcaggtcg aagccgttgg cctgcggcac gccgtaccag tcgttgatcg cggtcggggt
      361 ggccagggtc agcttgccac cgaaggtgat gccccagaag cccgcgtacg atccggtcac
      421 caccaggcgg tggcgcggcg caccgttgga gcggatggtc gggtagtcac cgatcacgcc
      481 gcggtcgaac gcgtagtgct cgttgatgtc acggttgtgg cgggcggtgg tccaggtgta
      541 ggcgatcgag gtgccccaac cgctttcctg ggtgaacggc ttctgcgccg acagcaggat
      601 ctgggtggcg cgggtcttga tgccctgctg gccgatgatc aggctgccga agcccggcac
      661 gttgcagctc caagcctggc ccaggccggc ctgggtaccg ccgcacaggc gcgggtcatc
      721 gaagaagttg ccggtcggat agcggttgcc cagggtgaag gcgaagccat cgtaggtcag
      781 cgtgcgcgag atggtggcgt cggtcagcca ctcgccgatc tggttgctca tgcccaggct
      841 gaactggtcg gcgtaaggca ccttcaggtt gttgttcagc aggtccactt ccaggccggc
      901 attgctggtc gaaccgacca ggctctgcag gttgccgatg ccgttgagca ggttcggatt
      961 ccagtcatag caggcggcgt tgccctggaa gcactggccg gtggccgggt tgcggaagta
     1021 gatggtcggc tgcggcagcg ccagcttggt ggtttccagc tgcaggtagt cgaacaggtc
     1081 gcggtcgtag gaacggcccg caccaccgtg gatcacgtgc tgctcgtcgg cattgatgtc
     1141 atacgagaag cccaggcgcg gctgccaggc atccttgaac gccttgcggt tgtggccgtt
     1201 gctgatgtag tcgttgatgt tcaggccgct cagcgccagc gtatcggcgt agctctggcc
     1261 agccgcagca cgcgggtcct gcgcgaacag cgcattgacc acttccggcg gggtcacgaa
     1321 gtccaggtag gacgggttct tctcgtagtc ccagcgcagg ccgaggttca gctgcaggtg
     1381 gtcgttgacc tgccagtcgt cctggatgaa caggccgatt tgcttgacct tcgagcgcac
     1441 ttcgccggac acgccggaca cgccggtcac cggcttcacg aactgcgcct tgtacggaat
     1501 gctgtccggg aaggtcgggt tgtcgatggt gtagtagaac tgcggattga tctgcgccgc
     1561 gtcggaggcg tacaggtcga tctgcttgta cttggcgccc atcttgatgg tgtggtcacc
     1621 ggcccactgg atgccatcca gggtcaggtt gtcttcgatc gaccagccct tctgcccctt
     1681 cacctgcgac gacatcgccg acgagccgcc gatcgagacg atcgggcgct cttcgttggc
     1741 gccgtccgga gcggtgtagt tgaagccgtt gcccatgctc agcggcttgg gattgttgaa
     1801 cgaatcctcg tgggtgacca tcagctcgtt gtagtaacgc tcaccactgt gattccagcg
     1861 caacgcgtaa cgacggtcgg tgttcttggt ttccttgccg tgcatcggcg cggtctggtc
     1921 cgagaactgc tgctgggttt cgtcacggtc ctggaaggtc agttccaggc ggtcgttgtc
     1981 ggtcggctcg aagtcgatct tgccgaagat caggtcctgc tggaacggct ggctggccgg
     2041 gcccaggccg gcctgtgcgt cggccggcac gcggtcggcc ttgctggtca ccgcgccgtg
     2101 cggggcaatg gtcaccggca ggtcgaagcg cttggcttca taggtgacga agaagtgggc
     2161 cttgtcctgg atgatcgggc cgcccagggc gaagccgtat tccttctcgg ccgagaccat
     2221 cttcgacttg ttcggctggc gctcggccgg ggtcatcgca cgcatgtctt catcggtgta
     2281 gcggtagaac gcctcaccct tgaactcgtt ggtacccgac ttggtcgccg cggtgacggc
     2341 ggcactggag acctggccat actcggcctt gtagttgccg gtgatgacct tgtactcgcc
     2401 gatggccagc tgcgggaacg ggttgcccgc gctgccggac tggccggcga cgccgccgcc
     2461 cttcacgtaa ctcttctggc ccacgccatc gatgtagaca ttggtgccat cggcattggt
     2521 ggcaccgccg cgcagcgagg tgttgccctt ggcatcacgg gtgaagatca tgcccggaac
     2581 cgcgtcggcg aactccagga agttgcgcga gacctgcggg gtggtctgga tctgctgcag
     2641 gctgacggtc ttgccgactt cggaggtgcg cacttcctgc agcagggtcg gcgcgacgac
     2701 attgacggtg tcgaggttgg tcgctgcggt cgaacccggg gtgctgctgg ccgcaccggc
     2761 gaagttcagg gtagcggtcg aggccacggt gacggtgacc ttctgcgact ggccattggc
     2821 gaccacgtca taggtacccg ggtccaggcc catcagcgag tagctgccat cggcacggat
     2881 ggtgccgcgg cggacggtgc cggtggccac gttggtggcg gtgacttcgg tgcctgcctg
     2941 ggcgccggcc acctggccac gaaggctggc attggccgac tgcgccatga cgttcggagc
     3001 ggcggccagc atcaggcagc tgaccagtgc ggtgctcagc agccggcgtg ccggcgtgcg
     3061 gaaggtggtg tgcatcatca actcaatctc cgggtggcgg tgaccgcgtg cgcggtccct
     3121 gcgatcaatc aaaaaagaag gaacgcctct ggcttcaacg gccggatggc ggagtggtgg
     3181 aatcgcgaac tatcaagcgg ggaaccaggg tctgcttgtc ccctgtcccg tccgtggagg
     3241 tgccgtccat caactgcatc aggcgcgtca tggcccgatc gccaagctcg gcgatgctga
     3301 cctgcatggt ggtcagcgac gggtggacga aacgcgccag tggaatgtca tcgaaacccg
     3361 ccaaggcgac atcggacggc acatggaccc ctgcctgggt gaatgcatac aggcaaccca
     3421 gggccatcat gtcgttggcg gcgaacacgg catcgggcag cgctccggct gccagcaact
     3481 cctgaccggc gcgatggccg gaagcttcgt cgaaatcacc gggcagctcg atgccctcgg
     3541 cgccactgcc gaatgcggcc agcgcgtcac ggaagccgcg caggcgctcg cgcgcgtcga
     3601 agttgaggtc cgggccagaa atgaacgcaa tgcggcggtg gccggcatcc agcaggtggc
     3661 gggtcatcgc catcgcgccg gcatgatcgt cgatgctcag caccgggtgg tcctgcccgg
     3721 gcagataggt gttgatcaac accgtcggca gcgactgcgg caggttgtcg gtcaggaagc
     3781 ccgggctctc ggcatagggc gacagcacca gcaggccgtc gacgcggccg cgcatggcac
     3841 gcagggccgc gccctgctgc tcctggtcac cgtggtagct ggacaccagc aggtgctggc
     3901 ggcggttgcg ggcaacgttg tcgatgccgc gcatcagctc ggagaagaat tcgccgtaca
     3961 ggtccggaag caccacgccc accgtattgg tgcggcggct gctcaggctg cgggcggcgg
     4021 cgtgcggggt gtaacgcagc cgtgcggcca cctccagcac aagctggcgg accggttcgg
     4081 cgacattttc atgcccgttg agcgcgcggg aaaccgtggc cacggagacc ctggcttcgc
     4141 gagcgacgtc tttgattgtg atagctgcct tgttcacgaa gccgccctcc acggcttgga
     4201 cctaccagca ttggcgcgga atgtaagcgt ttccatctgg gcttgtaaac agtccgttag
     4261 gcgaatgtcc tgaaatggac atggaaatct gtccatggcg gggccccgca gggaccggcc
     4321 aggacagtgc gggacaaggg ctcagccctg ttctgacggg gtctgtgcgc ggatggacaa
     4381 ggcgtggata tcggtgtcca tcatcgaccc cagcgcggcg tagaccgcgc gatgccgggc
     4441 cagcgggccc agtccggcga agcgttcact caccacatgc acgttgaaat ggccgcgccc
     4501 gtcgcgcgcg ccggcatgcc cggcatggcg atgactgtcg tcctcgatct cgagcacgct
     4561 cggcgccagt gcctgttgca gcgcagcacg catccgttcg atccgttccg cgttcacggc
     4621 aggaccttgc ggaacggacg cacctgcacg cgggtgtaga cgcctgcggc cacgtacggg
     4681 tcggcatcgg cccaggcctg ggcctgtacc agcgattcga actgcgcgat caccaccgaa
     4741 ccactgaaac cggccgggcc cgggtcttca ctgtccaccg ccgggcacgg gccggccagc
     4801 agcaggcgcc cctcgtcacg cagcgcgtgc agccgcgcca ggtgttccgg ccgcgcctgc
     4861 agccgttgcg ccagcacgtc ctggccgtca tacccttcga tcacatacca caccggcatt
     4921 tcctcgcttg cgttgtcggg tgcgcagatt ctagccaatg cggccgctgc cccggcccgg
     4981 ctggacactg gcgcgacaaa ggcttaccct aggctccatt gcacgtggct ggatgcagca
     5041 gcccgtcggt ttttgcggcc aacgcagccc ccgacgaccg tcccgctgct tcaaaaccgg
     5101 accatccggc cgggccacgt agacgacctc cccgtagttc tgtcgctgcc gttccctgcg
     5161 gcgcgtcctg ctgtttgata tgtgtggaat cgcgccgatc ccggcgtgtc tggtgccctg
     5221 gggctccgtg gcgcaggccc ggcgatcccg gtgccgcgac tggtccgttg caatcctgat
     5281 gtccattaga tgacttccga actcgcgctc gacgcgaacc cgccaacccg gccgcccgcc
     5341 ccccagcagc aggaaatgcc gctggccgtg gtgcatgggc aaccggtcct gcagattccg
     5401 caggacctgt acattccgcc ggacgcgctg gaagtcatcc tggatgcctt cgaaggcccg
     5461 ctggacctgt tgctgtacct gatccgccgg cagaacctgg acgtgctgga catccccgtg
     5521 gccgagatca cccggcagta cgtggaatac atcaccgtga tgcgcgagct gcgcttcgag
     5581 cttgctgccg agtacctggt gatggccgcg atcctggccg aggtgaagtc gcgcatgctg
     5641 ctgccgcgcc cggtcagcga ggaaggcgac gaagccgacc cgcgcgccga actggtgcgt
     5701 cgcctgcagg agtacgaacg tttcaagcag gccgccgagg acatcgacgc cctgccccgc
     5761 caggaccgcg acaccagcct ggcacacgcc ttcatgcccg aacgcgctac ggtgaagctg
     5821 ccgccgccgg tggacctgaa ggaaatgctg ctggcgctgc acgacgtgct caagcgcgcc
     5881 gagctgttca gcggccacgc catcaagcgc gaggcgctga gcgtgcggca acgcatgggt
     5941 gaagtgctcg gccggcttga agatggcaag ttctatcgtt ttgaagggct gttcaccgct
     6001 gaagaaggca agctgggcgt gctggtcacg ttcctggcgg tgctggaact ggccaaggaa
     6061 cagctgctgg acatcgtcca ggaagagccg ctggcgccga tctacgtgaa gtcgctggcg
     6121 gccggcaaca ccaatgcccc gctgcagttc agcagcgagt tcgacgacaa cgacgccgcc
     6181 aatgcggacg agtgagcgct gactgccgat ggatcaatcg ctgatcgacc gcattgtcga
     6241 gggtgccctg ctggcctcca gccagccgct caccctggcc cagctgaagg acctgttccc
     6301 ggaagaggaa ccggcaccgc cgggcagcat cgaacgtgcg ctggaacgcc tgcgggaagc
     6361 ctgcgcaggc cgcggcgtgg aactggtcga ggtcgcctcc ggcttccgct accaggtcac
     6421 cggcgaagtg catggttgga tcagccggct gtggaccgaa cgcaagaccc gctacacccg
     6481 cgccaccctg gaaaccctgg cgctgatcgc ctaccggcag ccgatcaccc gtggcgagat
     6541 cgaacaggtg cgtggcgtgg cggtcagcag caacatcatc caggcgctgg aagagcgtga
     6601 gtggatccgc gtggtcgggc accgcgacgt accgggcaag ccggccctgt tcggcaccac
     6661 caagggcttc ctggactact tcggcctgaa gcgcctggac gaactgccgc cgttgtcgga
     6721 attgaaggac ctgggcgagc tggaccccca gctggccctg gaccgcgacg taccggccgc
     6781 cgccggtgct gacggtccgg acatctcggc cggcgccgat ggcgctgccg caaacgatga
     6841 tgccggcatt tccggcagtg acacccccga ttccgccgat gcagcccctg cctcggcctc
     6901 cgatgagcaa gcaccttcgc ccttcgatga tgggcatccc gattccgcgc cgggcgagcg
     6961 cgcggtgcca gtgaacgaac gcgaagacaa cgccgtcgcg atgacgaccg tggctgttga
     7021 ccaagccgat tccgaaccag aggccgacct cgaaaccgtc ggccggagca aaactgatga
     7081 gtgacacccc tcgcaagctg tcgttgaaca agctctcgct caagcgcgaa gccacctccg
     7141 aacagttcaa gttggaagaa cgcctgcaca aggtgctggc ccaggccggc cttggctcgc
     7201 gccgcgcgct ggaacagcgc atcgccgaag gcctgatcaa ggtcaacggt gaagtcgcgc
     7261 agaccggcat gtcggtcaag agcggcgaca agatcgagat ggacggccgc ggcttcgtcg
     7321 ccaccgccct ggccgagccg tcgcgcgtgc tggtctacaa caagccggaa ggcgaagtga
     7381 ccacccgcga agaccccgaa ggccgcccga ccgtgttcga atcgctgccg ccgctgaagg
     7441 gcgcgcgctg gatcgcgatc ggccgcctcg acatcaacac caccggcctg ctgctggcca
     7501 ccaccgacgg tgagctagcc aacgccatga tgcacccgtc gttcgaggtc gagcgcgagt
     7561 acgtggtgcg cgtgcgtgcc ccggaaggcg aggaaaaggt ctccgacgcc atcgtcgacc
     7621 gcctctcccg cggcgttgca ctggaagacg gcccggccaa gttcgacgag atcgagcgca
     7681 tcggcggcac ggattcgcac gactggttcc gcgtcgtggt gaaggaaggc cgcaaccgcg
     7741 aagtgcgccg cctgtgggaa tcgcagggct gccaggtcag ccgcctgaag cgcacccgct
     7801 atggcaaggt cagcctgccg cgcgaactgg cccgcggcca ttcggtggaa ctgggtaccg
     7861 cccaggtgga agccctgcgc gcgcagctga agctggaaga aggcgcgccg tcggcgctga
     7921 ccctgcagcc ggtgatcggc cagcgccgtg ccgccaagac caccgtgcgc gtgcgcgagg
     7981 gtggccgtgg caatgcctac gtcaacggcc acaacaccgc tgatgaaggc cgcgagctgc
     8041 gtcgcttcga caacgtgcgc gaagatcgcg gccgtggtcg cggtggcaag ggcggcggtt
     8101 tcaagggcgg cctgactgtc agcggtgaag ccgcggccaa gcagtcgcag aagccgttca
     8161 agcagcgcgc acagaagaac gaccgttcgc tgccggaagg caatccggcg gcattccgca
     8221 cctggtacgt gccggatggc gtaagcaccg gcccgagcgg ccatcgcaac gccggtccgg
     8281 gcgcacgtgg cccgggtgcc cgtggtccgg gtgcaggcgg ccagggccgt ccgtacggca
     8341 agccgaaggg gccgggcgca ggcgccggtg gcggccaggg ccgtggcggt ttcggtggtg
     8401 aaggccgtgg cggcgcaggc ggccagggtc gtccggccgg cgcgggcaac cgctcgcagg
     8461 gccagggcaa caagcacccg tacggccatc cgggcaatgc ccccagcttc ccgtccgatc
     8521 acgcgacccc gggcttcaac ccgtacggca gcccgaagcc ggcacacggc gcccgtccgg
     8581 gcggccgtgg tccgggcggc ggcaacaacc gtggtccggg tggcaatcgt ggtcccggtg
     8641 gtccgggtgg caaccgtggc ccgggtggcc ccggcggcaa ccgcggtccg ggcggcccgc
     8701 gccgcagcgg cccgcgcggc ggctgatcgc cgatacgctt gaaatgagaa accccggctc
     8761 cggccggggt ttt
//
LOCUS       DAOKIP010000168         8767 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.168,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000168 DAOKIP010000000
VERSION     DAOKIP010000168.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 8767)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8767)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8767
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.168"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            127..786
                     /gene="eda"
                     /locus_tag="QEL58_003119"
     CDS             127..786
                     /gene="eda"
                     /locus_tag="QEL58_003119"
                     /EC_number="4.1.2.14"
                     /EC_number="4.1.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 4-hydroxy-2-oxoglutarate
                     aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase"
                     /protein_id="HDS1677558.1"
                     /translation="MGIEQHQVKAAELLHAAGILPVVTIHTLDQARAVSAALLEGGLP
                     AIELTLRTPVAMEALAMLKRELPDVVVGAGTVLTVQQMQQSIDAGADFLVTPGTPPAL
                     ADALAAAPLPVVPGAATPTELLSLYARGFRVCKLFPATAVGGLAMIKGLAGPVADLKL
                     CPTGGITENTAAEYLEQKNVVCIGGSWMVPGNWIADGEWDKVRASAADAAKIIKRVRG
                     H"
     gene            complement(1077..1724)
                     /locus_tag="QEL58_003120"
     CDS             complement(1077..1724)
                     /locus_tag="QEL58_003120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011408972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HDS1677559.1"
                     /translation="MTIRVYLVDDHALVRTGMKMILSGETDIEVVGEAETGEDALREV
                     RQLLPDVVLCDLHLPGVSGMEVTERIVRSHRNTRVVIVSVLEDGPLPKRLLEAGAAGY
                     IGKGCDAQELLRAVRDVAAGRRYLGTSIAQNLALSTVEGNGSPFDSLSPRELEVALLL
                     TQGLRQEDIARRLSLSAKTVNTHKARLFEKMGIHDNIALARMASQYGLVDPARPL"
     gene            complement(1925..2674)
                     /locus_tag="QEL58_003121"
     CDS             complement(1925..2674)
                     /locus_tag="QEL58_003121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HDS1677560.1"
                     /translation="MSEAPDKPAILAAPESASGFRHWMARNAWRLLLLFGGVLLPLAG
                     FVALADEVHEFESFHFDAPLLWQMHGLHSPLLDRFFVLISRLGYEWFLIPADVLIIGV
                     LLGYRRWREATFVGVSFVGSALLNMGSKHFFQRQRPSLWESIAPESTFSFPSGHAMGS
                     MTLAVTLVLLVWNTRWRWPVLLLAPAFSLLVSVSRVYLGVHYPSDILAGWCAALVWVV
                     GCYLVMFSRRHPWRRHGSPPAKASEASSQGV"
     gene            complement(2655..3920)
                     /gene="ispG"
                     /locus_tag="QEL58_003122"
                     /gene_synonym="gcpE"
     CDS             complement(2655..3920)
                     /gene="ispG"
                     /locus_tag="QEL58_003122"
                     /gene_synonym="gcpE"
                     /EC_number="1.17.7.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019300453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin-dependent
                     (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase"
                     /protein_id="HDS1677561.1"
                     /translation="MHDAVTRPTPPSDATSWPRRQTHAVQIGGVTVGGGKPVVVQSMT
                     NTDTSDVASSVKQVAELWRAGSEMVRLTVNTVEAAAAIPRIVDKLAMMGIDVPLIGDF
                     HYNGHQLLTAEPACAEALAKYRINPGNVGFGKKKDLQFAQLIEFAIRYNKPVRIGANW
                     GSLDQALAAKLMDENNLREQPWDAGRVLREALIRSALDSAEQAVELGLPRDRIVLSAK
                     VSGVQELIAVYRDLAQRSDFALHLGLTEAGIGSKGIVASSAALSVLLQEGIGDTIRIS
                     LTPEPGQSRTQEVIVAQELLQTTGQRAFTPLVTACPGCGRTTSEFFQELAKVVQNHVR
                     EKMPLWKIHHPGAENMTLAVMGCIVNGPGESRHANIGISLPGTGETPAAPVFVDGEKK
                     VTLRGDNIAQEFVALIDDYVEHNYVRSAG"
     gene            4035..5261
                     /locus_tag="QEL58_003123"
     CDS             4035..5261
                     /locus_tag="QEL58_003123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing histidine kinase"
                     /protein_id="HDS1677562.1"
                     /translation="MTGPDAPFLRTLCSLRWLAVGGQAATILVATWVLGLPLPQLPLW
                     AGVAVLALFNVYTQLRPEAADTAPLTAFGHILVDVIILTWMVGWSGGMANPFSSLFLI
                     LIALAAFALPLRWALAVALACLLGYASSGIFGQPLPDGYFRAQDLNRWGVVANFLISA
                     AVVLAFSTRLALALRQRELELSALRERFARNEGIVALATHAASVAHELNTPLATMTLL
                     ADDVAERSEEPEVREDMETLRELLVQCRERVLALAAPASADAPGRSHSSAQQVLEQWR
                     LVRPTIDLHRNDDAPLRLPLDPGVGHLLMVLLNNAADAGEKAGRPRVDLDLRIEGDDL
                     IGEVRDYGHGFDARAAVLPGKLFGSSKSEGMGVGLALSHATIERLDGEMWMRPAQGAG
                     SRVGFRLPLAPREDTP"
     gene            5258..5827
                     /locus_tag="QEL58_003124"
     CDS             5258..5827
                     /locus_tag="QEL58_003124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDS1677563.1"
                     /translation="MSLHHSTLGLLVDDDELYLRTLQRSLARKGLETQTAQDAASALA
                     LARQHPPAFALIDLKLGSDSGLALIQPLRALRADMRILLVTGYASIATAVEAIKLGAD
                     DYLPKPATVPMILRALGEEDDGPADDGEMEVPDAMTPISRLQWEHIQQAMHETGGNVS
                     AAARLLGMHRRSLQRKLAKRPSPERDPTR"
     gene            complement(5849..8749)
                     /locus_tag="QEL58_003125"
     CDS             complement(5849..8749)
                     /locus_tag="QEL58_003125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008268048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 2 lantipeptide synthetase LanM family
                     protein"
                     /protein_id="HDS1677564.1"
                     /translation="MTASPAAAVFARITEHFLADARAALAAGLHDPALDLRPDERELL
                     HGQGDAALREHAQLKLNRVLLLELHAAARGGDIGPLDSAGALDEFMALATSEGFQQHL
                     QRRYPVLLPRLSRMLEGQCAAVVELAARIGSDRALLTELLDRPAGALRAVSLGRGDLH
                     GGGRTVARLQFDGGTLMYKPRSLRIDATLDGLLAAVFGEGADRVRVPRVVDRGSHGWA
                     AFAEHRYCSGDEELRAYYRGLGHWLAILRLVGGTDIHLENLIAVGPVPVVVDAESVFS
                     RVIDVEPSGLGDAYDTAVKLMRNSVLRTGIVPFRTTGLGMEGVDLSAAGALPGEQPRV
                     QVPVIIEDGTAPARLGLVEAEVAIAQNHPSPQPDVSLYWDHISEGFVDASGRLRALDA
                     KGELMPLLAGFEGCQVRDVRRPTMAYAELGRMLWHPASLHNESQAVERAVDLLVRNAT
                     VSPAAPSDLDTVRGEVDDLRYGDIPIFASLLDAPRIHSIVANWRAMRIDLEDVTIRST
                     LVATDLNQHALARAEARSGYSYAARQPHADELDARRRALAARAVENLLRLAVHGEDGS
                     MTWITPEVTRSGWTVQPVQPDLYFGLGGIAFALAAYRREVAQGRADPVAGLEPAIDGA
                     IAVFQTMCERHPAEIDGGFVGTGSQIWTLLALHDLLQRPALLALAEHCAEAAERRGFQ
                     GPVKFELIDGVSGMILPLLALAEATGSARWLDLAAAAGRRMQDAAIVDADGARWPTPQ
                     FREPIGGFGHGAMGMGWALARLARSQAGSAAERAAWRQLAEEAFAFQAALFEPHTGHW
                     RDIHLQDGQKNFPTWCHGSVGIGLAAADLYARTGDPAQLRDMRRAVADARGKWGFSHT
                     LCHGDVSTRELLVLAAALDPEGCPYARDDAAIEIVSSIEEHQGMVGGLTRAAFTPGLM
                     IGLAGAIYGFLRMHPACVLPSPLLQETASARAGAMEPRFSSGQAVPAALAEA"
BASE COUNT         1474 a         3088 c         2863 g         1342 t
ORIGIN      
        1 tccatggcgc gaacggtcct ggcgacggcc tgccctccgc cgcatcacag tttccggcgc
       61 cgatacgccg cgaagtgatc actgaaaatc aaattcaaac gcagaagcaa aggcagaagc
      121 agagctatgg gtatcgaaca acatcaggtg aaggcggcgg agctgttgca tgcggcgggc
      181 atcctgccgg tggtgacgat tcatacgctg gaccaggcgc gtgcggtgag tgcggcgctg
      241 ctggaagggg gcttgccggc gatcgagctg accctgcgta cgccggtggc gatggaagcg
      301 ctggcgatgc tcaagcgcga gctgcccgat gtggtggtgg gcgcgggcac ggtgctgacc
      361 gtgcagcaga tgcagcagtc catcgatgcg ggtgcggatt tcctggtgac cccgggtacg
      421 ccgccggcac tggccgatgc gctggccgcc gccccgctgc cggtggtgcc gggtgcggcg
      481 acgccgaccg agctgctgtc gctgtatgcg cgcggcttcc gcgtgtgcaa gctattcccg
      541 gccacggccg tgggcgggct ggcgatgatc aagggcctgg ccggcccggt cgccgatctc
      601 aagctgtgcc cgaccggtgg catcaccgag aacaccgccg ccgaatacct cgagcagaag
      661 aacgtggtct gcatcggtgg ttcgtggatg gtaccgggca actggatcgc cgacggcgaa
      721 tgggacaagg tccgcgccag cgccgccgac gcggcgaaga tcatcaagcg cgtgcgcggc
      781 cactgagccc gacaaaggtg tagagccgag cccacgctcg gctctgcaag accaacctcc
      841 cgagcgcgca cagcgcgcga cccgctcctg ctcttccctc ttcattccgc ggtgaatgcc
      901 ccggaaactg tccggggtcg ggcaggttgg gttcgcgggg gtgtgagcag catggatgcg
      961 gcgaccaagc ccccatggat gggttcacgg cgtcccccac gaacccaacc tgcccggcca
     1021 agctgccaat gtcagcggca atacaccgcg aggggctcag ccgtcggccg aaaccctcac
     1081 aacggccgtg ccggatccac cagcccgtac tggctcgcca tgcgcgccag cgcgatgttg
     1141 tcgtggatcc ccatcttctc gaacaaccgc gccttgtgcg tgttcaccgt cttcgcgctc
     1201 aggctcaggc gccgcgcgat gtcttcctgg cgcaggccct gggtcagcag cagcgccact
     1261 tccagctcgc gcggcgacag gctgtcgaac ggcgagccgt tgccctccac cgtcgacagc
     1321 gccaggttct gcgcgatgct ggtgcccagg tagcgacgac cggccgccac gtcgcgcacc
     1381 gcacgcagca gctcctgcgc atcgcagccc tttccgatgt agccggcggc accggcttca
     1441 agcaggcgct tcggcagcgg gccgtcttcc agcaccgaca cgatcaccac gcgggtattg
     1501 cggtggctgc ggacaatgcg ctcggtcact tccatgccac tgacacccgg caggtgcaga
     1561 tcgcacagca ccacgtccgg cagcagctgg cgcacttcac gcagcgcgtc ttcgccggtc
     1621 tcggcttcgc ccaccacctc gatgtcggtt tcccccgaca gaatcatctt catcccggtg
     1681 cggaccagtg cgtggtcatc caccaggtag actcgaatcg tcattcacgt acctcttcga
     1741 atgcggccat tgcaggtcaa gctaggcagg gtgccgtaac cctgcaagcg cgttcgtaat
     1801 gcggcaatgg caatctgcct tgcgcatcac agtaccgcgc ctggtgcttg ccccctgtct
     1861 tgcagaacct gctgcaacga aacaactgat ctatcacgta gacgtccccg aagggtcatc
     1921 cacgtcaaac cccctgtgat gatgcttcgc tggccttcgc tggcggcgag ccgtgacgtc
     1981 gccatgggtg ccggcgactg aacatgacca gatagcaccc taccacccaa accagcgcgg
     2041 cacaccatcc ggccaggata tcggaggggt aatgcacccc cagatagacc cgggacacgc
     2101 tgaccagcag gctgaacgcc ggggccagca gcagcaccgg ccagcgccag cgggtgttcc
     2161 agaccagcag taccagggtc accgccaggg tcatcgaccc catcgcatgg ccactgggga
     2221 aactgaacgt cgattccggc gcgatcgatt cccacaggct ggggcgttgg cgctggaaga
     2281 agtgcttgct gcccatgttc agcagcgccg agccgacgaa gctgacgccg acgaaggtgg
     2341 cctcgcgcca gcgccggtag cccagcagca cgccgatgat cagcacatcg gccgggatca
     2401 ggaaccactc gtagcccagc ctggagatga gcacgaagaa gcggtccagc agcggcgaat
     2461 gcaggccatg catctgccac agcagggggg catcgaaatg gaacgattca aattcgtgca
     2521 cttcatcggc cagcgcgacg aaaccggcca acggcagcag cacgccaccg aacagcagca
     2581 gcaggcgcca ggcgttgcgc gccatccagt ggcggaaacc ggaggctgac tccggtgcag
     2641 cgaggatcgc aggcttatcc ggcgcttcgg acatagttgt gttcgacgta atcgtcgatc
     2701 agggcgacga actcctgggc aatgttgtcg ccacgcaggg tcaccttctt ctcgccatcg
     2761 acgaagaccg gcgccgccgg cgtctcaccg gtacccggca gggagatgcc gatgttggcg
     2821 tggcgcgact caccgggccc gttgacgatg cagcccatca ccgccagggt catgttctcc
     2881 gcccccgggt ggtggatctt ccacagcggc atcttctcgc gcacgtggtt ctgcaccacc
     2941 ttggccagtt cctggaagaa ttcggacgtg gtgcgaccgc agcccgggca ggccgtgacc
     3001 agcggggtga aggcgcgctg gccggtggtc tgcagcagtt cctgggcgac gatcacttcc
     3061 tgcgtacgcg actggcccgg ttccggggtc agcgaaatgc ggatggtgtc accgatacct
     3121 tcctgcagca gcacgctcag cgccgccgac gacgcgacga tgcccttgct gccgatgccg
     3181 gcctcggtca ggcccaggtg cagggcgaag tcggaacgct gggccaggtc gcggtacacc
     3241 gcgatcagct cctgcacgcc actgaccttg gccgacaaca cgatgcgatc gcgcggcagg
     3301 ccgagttcca ccgcctgctc ggccgaatcc agcgccgaac ggatcagcgc ctcgcgcagc
     3361 acgcggccgg catcccaggg ctgttcgcgc aggttgttct cgtccatcag cttcgccgcc
     3421 agggcctggt ccagcgagcc ccagttggcg ccgatgcgca ccggcttgtt gtagcggatc
     3481 gcaaactcga tcagctgggc gaactgcagg tccttcttct tgccgaagcc gacgttgccc
     3541 gggttgatac ggtacttggc cagtgcttcg gcacaggcgg gctcggcagt cagcagctgg
     3601 tggccgttgt aatggaagtc accgatcagc ggtacgtcga tgcccatcat cgccagcttg
     3661 tcgacgatac gcggaatcgc cgcagcggct tcaacggtat tgacggtcaa ccgcaccatt
     3721 tccgaaccgg cacgccacaa ctcggccacc tgcttcacgc tggaggccac gtcggaggtg
     3781 tcggtgttgg tcatcgactg caccaccacc ggcttgcctc cgcctacggt gaccccgccg
     3841 atctgcacgg catgggtctg gcggcgcggc caggaggtgg catcggaggg cggagtcggg
     3901 cgggtgacgg cgtcgtgcat gggcgcattc taccgcccgc ccccgcattc cgggtgactc
     3961 gcattcagcc ggcggcacgg ctgcggccta ttgtcgcagg cacgcccgcc cgcgaacgca
     4021 tacgatgggc atgaatgacc ggtcccgacg ctccgtttct ccgtaccctg tgcagcctgc
     4081 gctggcttgc cgtgggcggc caggccgcga ccatcctggt ggccacctgg gtgctgggcc
     4141 tgccgttgcc gcagctgccg ttgtgggccg gcgtggcggt gctggccctg ttcaacgtct
     4201 acacccagtt gcgcccggag gcagctgaca ccgcgccgct gaccgccttc ggccacatcc
     4261 tggtggacgt gatcatcctg acctggatgg tgggctggag cggcggcatg gccaacccgt
     4321 tcagctcgct gttcctgatc ctgatcgcac tggccgcatt cgcccttccc ctgcgctggg
     4381 cgctggcggt cgcactggcc tgcctgctcg gctacgccag cagcggcatc ttcgggcagc
     4441 ccctgccgga cggctacttc cgcgcacagg acctcaaccg ctggggcgtg gtggccaact
     4501 tcctgatctc cgccgcggtg gtgctggcgt tctcgacccg gctggcattg gcactgcgcc
     4561 agcgcgagct ggagctgtcg gcgctgcgcg agcgcttcgc gcgcaacgaa ggcatcgtcg
     4621 cgctggccac ccatgccgcc tcggtggcgc atgaactgaa taccccgttg gcgacgatga
     4681 ccctgctcgc cgacgacgtc gccgagcgca gcgaagagcc ggaagtacgc gaggacatgg
     4741 aaaccctgcg cgagctgctg gtgcagtgcc gtgagcgggt gctggcactg gccgcaccag
     4801 cgtcggccga cgcgccgggc cgcagtcact ccagcgccca gcaggtgctg gagcaatggc
     4861 gactggtgcg gccgaccatc gacctgcacc gcaacgacga tgcgccactg cggctgccgc
     4921 tggacccggg cgtgggccac ctgctgatgg tcctgctcaa caacgccgcc gatgccggcg
     4981 agaaggccgg ccggccgcgc gtggacctgg acctgcgcat cgaaggcgac gacctgatcg
     5041 gcgaagtccg cgactatggc cacggcttcg atgcccgcgc cgccgtgctg ccgggtaagc
     5101 tgttcggcag cagcaagagc gagggcatgg gcgtcggcct ggccctgtcc catgccacca
     5161 tcgaacgcct cgacggcgag atgtggatgc gcccggccca gggggccggc agccgcgtcg
     5221 gcttccgcct gccgctggcc ccacgcgagg acaccccatg agccttcacc actccaccct
     5281 gggcctgctg gtcgacgacg acgagctgta cctgcgcacc ctgcagcgca gcctggcccg
     5341 caaggggctt gaaacgcaga ccgcacagga tgccgccagc gcgctggcac tggcccgcca
     5401 gcatccgcca gcgttcgcgc tgatcgacct gaagctgggc agcgattcgg gcctggccct
     5461 gatccagcca ctgcgcgccc tgcgcgccga catgaggatc ctgctggtga ccggctacgc
     5521 cagcatcgct accgcggtgg aagccatcaa gctcggtgcc gacgactacc tgcccaagcc
     5581 ggcgaccgta ccgatgatcc tgcgcgcatt gggcgaggaa gacgacggcc cggccgacga
     5641 tggcgaaatg gaagtgcccg acgcgatgac gccgatcagc cgcctgcagt gggaacacat
     5701 ccagcaggcg atgcacgaga ccggtggcaa tgtctcggca gccgcgcgcc tgctcggcat
     5761 gcaccggcgc tcgctgcagc gcaagctggc caagcggccg agcccggaac gcgacccgac
     5821 ccgttgaccg ccgcgggacg ttcccggctc aggcctccgc cagcgccgcc ggcacggcct
     5881 gcccgctgct gaatcgtggc tccattgcgc ccgcccgcgc cgacgccgtc tcctgcagca
     5941 gcggcgacgg cagcacgcag gccggatgca tgcgcaggaa tccatagatc gcgccggcca
     6001 gcccgatcat caggcccggg gtgaaggccg cacgggtcaa cccgccgacc atgccctggt
     6061 gctcctcgat cgaagacacg atctcgatgg ctgcatcatc ccgcgcatag gggcagccct
     6121 ccgggtccag cgcggcggcc agcaccagca gctcgcgggt cgacacgtcg ccgtggcaca
     6181 gggtatggct gaaaccccat ttgccgcgtg catcggccac cgcccggcgc atgtcgcgca
     6241 actgcgccgg gtcgccggta cgcgcataca ggtcggcggc cgccagtccg atgccgacgc
     6301 tgccatggca ccaggtgggg aagttcttct gcccgtcctg cagatggatg tcgcgccagt
     6361 gcccggtatg cggctcgaac aatgccgcct ggaacgcgaa ggcctcttct gccagttgcc
     6421 gccaggcggc gcgctctgcc gcactgcccg cctgcgaacg tgccagccgt gccagcgccc
     6481 accccatgcc catcgcacca tggccaaagc caccgatcgg ctcccggaac tgcggcgtcg
     6541 gccagcgcgc accgtcggca tcgacgatcg ccgcatcctg catccgtcgt cccgctgcag
     6601 ccgccagatc cagccagcgc gcgctgccgg tggcctcggc cagcgccagc agcggcagga
     6661 tcatgccgga cacgccatca atcagttcga acttcaccgg cccctggaaa ccacggcgtt
     6721 cggcggcttc cgcgcagtgt tctgccagcg ccagcagtgc cggccgctgc aacagatcgt
     6781 gcaacgccag cagggtccag atctgcgaac cggtgccgac gaatccaccg tcgatctcgg
     6841 caggatggcg ctcgcacatg gtctggaaca ccgcaatggc gccgtcgatg gccggttcca
     6901 ggccggccac cggatctgca cgcccctgcg ccacttcacg gcggtaagcc gccagcgcga
     6961 aggcaatgcc acccaggccg aagtacaggt cgggctgcac tggttgaacc gtccagccgc
     7021 tgcgggtcac ctcgggcgtg atccaggtca tcgagccgtc ttcaccgtgc acggccagcc
     7081 gaagcaggtt ctccaccgcg cgcgctgcga gtgcgcgtcg acgcgcatcc agttcgtcgg
     7141 cgtgcggctg ccgtgccgcg tagctgtagc cggagcgggc ctctgcacgt gccagcgcat
     7201 gctggttcag gtcggtggcc accagcgtgc tgcggatggt cacgtcttcc agatcgatgc
     7261 gcatcgcgcg ccagttggcg acgatcgaat gaatgcgtgg cgcatccagc agcgatgcga
     7321 agatcggaat gtcaccgtag cgcaggtcat ccacctcgcc gcgcacggtg tccaggtccg
     7381 aaggtgcagc cggcgatacc gtcgcgttcc gtaccagcag gtcgacggca cgttcgactg
     7441 cctgggattc gttgtgcagg gacgccggat gccagagcat ccgccccagc tcggcatagg
     7501 ccatggtcgg ccgccgcacg tcccgcacct ggcacccttc gaaccccgcc agcaacggca
     7561 tcagctcgcc cttcgcatcc agcgcgcgca ggcgcccact ggcatcgacg aaaccctcgc
     7621 tgatgtggtc ccagtacaac gagacatccg gctgcgggct cggatggttc tgtgcgatgg
     7681 caacctccgc ctcgaccagg cccagccgcg ccggcgcggt cccgtcttcg atgatcaccg
     7741 gcacctgcac ccgtggctgc tcgcccggca gcgcgccggc cgcggacagg tccacgcctt
     7801 ccatgccgag gccggtggtg cggaacggca cgataccggt gcgcagcacg gaattgcgca
     7861 tcagtttgac ggcggtgtcg taggcatcgc ccaagcctga gggttcgacg tcgatgacgc
     7921 gcgaaaacac actttcggcg tcgaccacca ccggcaccgg cccgactgca atcaggttct
     7981 caagatggat gtcggtaccc ccgaccaggc gcaggatcgc cagccagtga ccgaggccgc
     8041 ggtaataggc acgcagctct tcgtcaccgg aacagtagcg gtgctccgcg aatgcggccc
     8101 agccgtggct gccacgatca accacgcggg gcacgcgtac ccggtccgcg ccttcgccga
     8161 agactgcggc aagcaggcca tcgagcgtgg catcgatgcg cagcgagcgc ggcttgtaca
     8221 tcagcgtgcc accgtcgaac tgcagccgcg ccactgtgcg gccgccgcca tgcaggtcac
     8281 cccgccccag cgagacggca cgcaacgctc ctgccggccg gtcgagcagc tccgtcagca
     8341 gcgcgcgatc actgccgatg cgcgcggcca gctccaccac ggccgcgcat tgcccttcga
     8401 gcatgcgcga cagccgcggc aacagcaccg ggtagcgtcg ctgcagatgc tgctggaagc
     8461 cctcgctggt ggcgagggcc atgaattcgt ccagcgcacc ggcgctgtca agtgggccga
     8521 tgtcaccgcc gcgcgcggcg gcatgcagtt caagcagcag cacgcgattg agcttgagct
     8581 gggcatgctc acgaagcgcg gcatcgcctt gcccgtgcag cagctcgcgt tcgtccggcc
     8641 gcaggtcgag agcggggtca tgcaggccag cggccaacgc ggcgcgcgca tcggcaagaa
     8701 aatgttcggt gatgcgcgca aacacggccg cagccggaga agcggtcatt acgccccctg
     8761 caaagtg
//
LOCUS       DAOKIP010000169         8755 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.169,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000169 DAOKIP010000000
VERSION     DAOKIP010000169.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 8755)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8755)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8755
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.169"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(3..815)
                     /locus_tag="QEL58_003126"
     CDS             complement(3..815)
                     /locus_tag="QEL58_003126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="APH(6) family putative aminoglycoside
                     O-phosphotransferase"
                     /protein_id="HDS1677565.1"
                     /translation="MSEPYLSRWRLRRDGASIKTPHAQLWPVLTAAGEPAMLKVSSET
                     EEQNSHRLLRWWDGDGAARLLAHEGPAILIERARGDSLRQRSIDGDDDACTTILCQVL
                     QQLHRPRSAPPAELVCLRTWFADLLQPRAALPPLLEQCRSMAEELLQDEQEIRPLHGD
                     LHHDNVLDFGPRGWLAIDPKRLLGDRAFDYTTLFSNPDLCGPGIHVATRPERFAARLE
                     QVNTLAGLERARLLRWIAASMGLSAVWFRDDGDPADVDEAVARMALEALAEG"
     gene            954..3239
                     /gene="clpA"
                     /locus_tag="QEL58_003127"
     CDS             954..3239
                     /gene="clpA"
                     /locus_tag="QEL58_003127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016901749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     ClpA"
                     /protein_id="HDS1677566.1"
                     /translation="MFSKDLEHTIGQCYKRAREARHEFMTVEHLLLALLDNPSAQAVL
                     KACGADAERLRQELEQAIEASVSRLAEDDGRDTQPTLGFQRVLQRAVYHVQSSGKKEV
                     TGANVLVAIFGEKDSHAVYYLNQQDVTRLDVVNYLSHGIAKLGEEGEQPSSSSEGEGR
                     IEGGEGEPKGDALTEFASNLNEQARAGRIDPLVGRADEIERTIQVLCRRRKNNPLYVG
                     EAGVGKTAIAEGLARRIVEGSVPDVLADAVIYSLDLGALVAGTKYRGDFEKRLKSVLT
                     ALKKVPNAVLFIDEIHTIIGAGSASGGTMDASNLIKPALASGELRCIGSTTFQEYRGI
                     FEKDRALARRFQKIDIVEPTVGETYEILQGLKSKYELHHGVTYSDEALQAAVDLSVKH
                     IGDRLLPDKAIDVIDEAGARQRLLPEGQRKELIDVEEVEAIVAKMARIPTKQVSATDK
                     DVLQHLERNLKMVIFGQDPAIETLSSAIKLARSGLGNPEKPIGNFLFAGPTGVGKTEV
                     TKQLALQLGIELVRFDMSEYMEPHSISRLIGAPPGYVGFDQGGLLTEKIVKTPHCVLL
                     LDEIEKAHPDIFNILLQVMDRGVLTDTNGREANFKNVVLVMTTNAGAAQASRRSIGFT
                     KQDHATDAMETIRRAFTPEFRNRLDAVVQFQALGFEHILRVVDKFLIELEMLLQDKHV
                     SLSATPTARDWLAHHGFDPLMGARPMARVIQDKIKRPLADELLFGKLVNGGKVSIDVR
                     DDELVVETQAEPERLLPVTVE"
     gene            complement(3312..3692)
                     /locus_tag="QEL58_003128"
     CDS             complement(3312..3692)
                     /locus_tag="QEL58_003128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010485850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677567.1"
                     /translation="MKMPSLLTALALAATGLLAPTAQAADTAPAQCVPLAGEQQIVRA
                     GADKNVLLRTGDDHYIVHFRSSCPSAVLATRLGFRTDGRKEADQLCGEGRSQLDTGNT
                     TCDVSRIEPIDAGQFKREVRRRSR"
     gene            complement(3896..4114)
                     /gene="infA"
                     /locus_tag="QEL58_003129"
     CDS             complement(3896..4114)
                     /gene="infA"
                     /locus_tag="QEL58_003129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002553999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-1"
                     /protein_id="HDS1677568.1"
                     /translation="MSKDDSIEFEGTVSETLPNTTFRVRLENGHEIIAHISGRMRKNY
                     IRILTGDRVKVEMTPYDLTKGRITYRMK"
     gene            complement(4201..4941)
                     /locus_tag="QEL58_003130"
     CDS             complement(4201..4941)
                     /locus_tag="QEL58_003130"
                     /EC_number="2.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010485844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl/phenylalanyl-tRNA--protein transferase"
                     /protein_id="HDS1677569.1"
                     /translation="MTRPLPWRLADAPDAPFPPAETALRQPDGLLAVGGDLHPVRLLN
                     AYAGGIFPWFSEGEPILWWSPDPRMVFRTEGVHLSSRFRRQLRGSTWEVTADTAFSRV
                     MQACAAAPRPGQDGTWISPAMIEAYSQLHDLGFAHSFEVWDRQTLVGGIYGVAIGSMF
                     FGESMFSGASGGSKIALAALAATLRGWGWALIDAQVENPHLLRMGAEHLPRAEFLAHV
                     RQAVRGNGREGPWTRAVGRLPARDLAGG"
     gene            5015..6283
                     /locus_tag="QEL58_003131"
     CDS             5015..6283
                     /locus_tag="QEL58_003131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677570.1"
                     /translation="MSDPISAVLDVHDSPRTRNDSLGTLLSLAAEQPRQLGELMLQAL
                     ARRSPGSAFLDMALDLVPDEVVPAVATDAWRRYRDGERGELLASVIEFASYQAPKVLQ
                     DDWDALLAVAIEDELQLASQLWRALPPAVAAGWAQVLAEADDDREMPRARALLLAAQP
                     ATYAAARGYLAGWGQLDAEAWAHWAGVADGPHPRRLHGEQPLHIRFGGAQHRAQLANE
                     PGWRKRIWRLHPTWSGGQVHHAGHMGGRLEALCGSCHAPLQRLLQTDAAVLQPGAAGE
                     ITLAVCLDCCGWEEPPVRFYRHDGAGRPSCHPRQYRDVPSTPTDSGDLMPADVGLASL
                     DSARWRQQDWGQSNHRQNLSRVGGPPSWVQSAWYPACIDCGQDMPFVMQLDSTLPTTG
                     ESTLLWGSGGMLYTFWCAKCRVSGHFWQCT"
     gene            complement(6439..7572)
                     /locus_tag="QEL58_003132"
     CDS             complement(6439..7572)
                     /locus_tag="QEL58_003132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008264800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HDS1677571.1"
                     /translation="MPSTRFLDSLQAIRATDWDALHDGHNPFVSHAFLSGLEDHGCLR
                     EDWGWQPQHFTLWDGDVLMGAIPGYLKTNSHGEFVFDHAWANAYARHGRDYYPKWLGA
                     VPYSPVTGPRLLARHDSDRATLLAALCAQLPLLNVSSAHVNFHSASEEALFGDDWLLR
                     EDVQFQWQNPGDWATFEQFLGAMDHKHRKNIRQERAKVARQGITFRVVHGDEASRADL
                     QAMYRFYLQTFMEYGNAPALTEAFLRHLAITLGRGLVLFLAEQDGEPIAGALCLRGGD
                     TLFGRYWGGATLPGLHFEACYYQGIEYCLREGLARFEPGAQGEHKLARGFLPTRVRSR
                     HWVADAEFANALQDWCRQERRDVRRYQQELQGHGPFRERANQG"
     gene            7747..8187
                     /locus_tag="QEL58_003133"
     CDS             7747..8187
                     /locus_tag="QEL58_003133"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677572.1"
                     /translation="MIATALTAMLALTGQVEAEQPAFRRGPVDSDSAMNAIVTRASQD
                     ALDAYRRQNHRKNPLEAVAVYDVATGLIRIDLRGGELPGEGGAELEDLQGFISNGALE
                     AARPIVPATGTKFFYNGREFDEQYPDDSAGNGGQESPPARLAGL"
     gene            8446..8742
                     /locus_tag="QEL58_003134"
     CDS             8446..8742
                     /locus_tag="QEL58_003134"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677573.1"
                     /translation="MRAGRYRIHDSVGTAHDIKGNGESFVIAIESSYYRKWSHQESYS
                     NTISMDVEYRYIALADHLPTVVALEDQPLFVYSTDGGPAGEGVLTAKVEYLAAE"
BASE COUNT         1511 a         2803 c         2975 g         1466 t
ORIGIN      
        1 gttcaccctt ccgccagtgc ctccagcgcc atccgcgcca ctgcctcgtc cacgtccgcg
       61 gggtcgccgt catcgcggaa ccataccgcc gacagcccca tgctggctgc gatccagcgc
      121 agcaggcgcg cccgttccag gccggccagc gtgttcacct gttccagccg cgcggcaaac
      181 cgctccgggc gcgtggccac atggataccc gggccgcaca ggtccgggtt gctgaacagt
      241 gtcgtgtaat caaaggcacg gtcgcccaac agccgcttcg ggtcgatcgc cagccagccg
      301 cgcgggccga aatccagcac gttgtcgtgg tgcaggtcac cgtgcagggg ccggatctcc
      361 tgttcgtcct gcagcagctc ctccgccatt gacctgcact gttccaataa tggcggtagc
      421 gcagcccttg gctgcagcag gtcggcgaac catgtacgca ggcagaccag ttccgctggc
      481 ggcgcgctcc gcggccggtg cagctgctgc aggacctggc acaggatcgt ggtgcaggcg
      541 tcatcgtcgc cgtcgatcga gcgttgccgc agcgagtcgc cgcgtgcgcg ttcgatcagg
      601 atcgccggcc cctcgtgggc cagcaggcgg gcggcgccgt caccgtccca ccagcgcagc
      661 aggcgatggc tgttctgctc ctcggtttcg ctgctgacct tcagcatcgc cggctcgccg
      721 gcggcggtca gcaccggcca gagctgggca tggggcgtct tgatggatgc gccatcacgc
      781 cgcaatcgcc agcggctcag gtagggttcg ctcatgctgg gcgggctgtc ctggagtgaa
      841 tgaagatcaa gcaatgtcta ctgctaacgc catctgaacg cagcaatccg ctagggtgat
      901 ggaaaacgcg tagtcaggcc gcatattgtc cccatctgcc gccggagtaa tccatgttca
      961 gcaaagacct cgaacacacc atcggccagt gctacaagcg cgcccgtgag gcccggcatg
     1021 agttcatgac ggtcgaacac ctgctgttgg cactgctcga caacccgtcc gcccaggccg
     1081 ttctgaaggc ctgtggggcc gacgccgaac gcctgcgcca ggaactggag caggccatcg
     1141 aggcctctgt gtcgcgcctg gccgaagatg acggccgcga cacccagccg accctgggct
     1201 tccagcgcgt gctgcagcgg gccgtgtacc acgtgcagtc ctcgggcaag aaggaggtca
     1261 ccggcgccaa cgtgctggtc gccatcttcg gcgaaaagga ctcccacgcc gtctattacc
     1321 tcaaccagca ggacgttacc cggctggacg tggtcaatta cctgtcccac ggcatcgcca
     1381 agctgggtga ggagggtgag cagccgtcct cgtcctccga gggcgagggc cgcatcgagg
     1441 gcggggaggg tgagccgaag ggcgacgccc tgaccgaatt cgccagcaac ctcaacgaac
     1501 aggcccgggc cggtcgcatc gacccgctgg tcggccgtgc cgacgagatc gagcgcacca
     1561 tccaggtgct gtgccgccgc cgcaagaaca atccgctgta cgtaggtgag gccggcgtgg
     1621 gcaagaccgc gattgccgag ggcctggccc gtcgcatcgt cgagggctcg gtgcccgacg
     1681 tgctggccga tgccgtgatc tactcgctcg acctgggcgc actggtggcc ggcaccaagt
     1741 accggggtga cttcgaaaag cgcctgaaga gcgtgctgac cgcgttgaag aaggtaccca
     1801 atgcggtgct gttcatcgac gagatccaca ccatcatcgg tgccggttcg gcgtcgggcg
     1861 gcaccatgga tgcgtccaac ctgatcaagc cggcgctggc ctccggtgag ctgcgctgca
     1921 tcggctcgac caccttccag gagtaccgtg gcatcttcga gaaggatcgg gcgctggccc
     1981 gccgcttcca gaagatcgat atcgtcgagc cgaccgtcgg cgagacctac gaaatcctgc
     2041 aggggctgaa gtccaagtac gaactgcacc acggcgtgac ctattccgac gaggcattgc
     2101 aggcggcggt ggacctgtcg gtgaagcaca tcggcgaccg cctgctgccg gacaaggcca
     2161 tcgacgtgat cgacgaggcc ggcgcccgcc agcgcctgct gccggaaggc cagcgcaagg
     2221 agctgatcga cgtcgaggaa gtcgaggcga tcgtcgccaa gatggcgcgc atcccgacca
     2281 agcaggtcag tgccaccgac aaggatgtgc tgcagcacct ggagcgcaac ctgaagatgg
     2341 tgatcttcgg tcaggatccg gccatcgaga cgctgtcttc ggcgatcaag ctggcccgct
     2401 cgggcctggg caacccggaa aagccgatcg gcaacttcct gttcgccggc ccgaccggtg
     2461 tcggcaagac cgaggtgacc aagcagctgg cgctgcagct gggcatcgag ctggtccgct
     2521 tcgacatgtc cgagtacatg gagccgcatt cgatcagccg cctgatcggt gcgcccccgg
     2581 gctacgtcgg cttcgaccag ggtggcctgc tgaccgaaaa gatcgtcaag acgccgcact
     2641 gcgtgctgct gctggacgaa atcgagaagg cgcacccgga catcttcaac atcctgctgc
     2701 aggtgatgga ccgcggcgtg ctcaccgata ccaacggtcg cgaggccaac ttcaagaacg
     2761 tggtgctggt gatgaccacc aatgccggcg cggcgcaggc ctcgcggcgt tctatcggtt
     2821 tcaccaagca ggaccatgcc accgacgcga tggagaccat tcgccgcgcc ttcaccccgg
     2881 aattccgcaa ccgcctcgac gcggtagtgc agttccaggc actgggcttc gagcacatcc
     2941 tgcgcgtggt cgacaagttc ctgatcgagc tggagatgtt gctgcaggac aagcacgtca
     3001 gcctgtcggc taccccgacc gcgcgcgact ggctggccca tcacggcttc gacccgctga
     3061 tgggtgcccg tccgatggcc cgcgtgatcc aggacaagat caagcgtccg ctggccgacg
     3121 aactgctgtt cggcaagctg gtgaacggtg gcaaggtcag catcgacgtc cgcgacgacg
     3181 agctggtggt cgaaacccag gccgaaccgg agcgtctgtt gccggtgacg gtggagtaaa
     3241 gccggcgccg ggcgcaaccc ggcaacaagc aggggcaagg gcggcttcgg ccgcccttgt
     3301 cgtgcctgcg gtcagcggct gcgacggcgc acttcgcgct tgaactgccc ggcatcgatc
     3361 ggttcgatgc gcgacacgtc gcaggtggta ttgccggtgt cgagctggct gcggccttca
     3421 ccgcacaact gatccgcctc cttcctgccg tcggtcctga agccgaggcg ggtggccagc
     3481 acggccgaag ggcagctgct gcggaagtgc acgatgtagt ggtcgtcgcc ggtgcgcagc
     3541 aacacgttct tgtctgcgcc ggcgcgtacg atctgctgct cgccggccag cggtacgcat
     3601 tgggcggggg ccgtgtcggc ggcctgggcg gtcggcgcca gcaggccggt cgcggccagg
     3661 gcaagggcgg tgagcaggga gggcatcttc atggcggtgc gagggggtag cgatccggac
     3721 tggaccggat tgcagattgc cgtcgccgtt gcacatgcga atctgccgca agcggggctg
     3781 accgacgtca cggtgagttc ggtcacgatg accttcggca gggccggatt gcaggcatga
     3841 caaaaggcca gcaaccaggg ctggccttgt cggagtggcg ccaggcgccg accgcttact
     3901 tcatgcggta ggtgatacga cccttggtca ggtcgtatgg ggtcatttca accttgaccc
     3961 ggtcaccggt aaggatgcgg atgtagttct tgcgcatgcg gccggagatg tgggcaatga
     4021 tttcgtgccc attttccaga cgaacgcgga aagtggtgtt cggcagcgtc tcgctgacgg
     4081 tgccctcgaa ctcgatggaa tcgtctttcg acatgtagtc ctgtgcggtt cagaaaacgg
     4141 ccacgctggg cctaaggcgc agtattttac gcgtgaccgg gccagcttgc aaagtttgtg
     4201 ttaacccccg gccaaatccc gtgccggcag ccgtccgacc gccctggtcc acgggccttc
     4261 gcgcccgttg ccgcgcacgg cctgtcgcac atgcgccagg aattcggcgc gcggcaggtg
     4321 ctcggccccc atccgcagca gatgcggatt ctccacctgc gcatcgatca gcgcccagcc
     4381 ccagccgcgc agggtggccg ccagcgccgc cagtgcgatc ttggagccgc cgctggcgcc
     4441 gctgaacatg ctttcgccga aaaacatcga cccgatcgcc accccgtaga tacccccgac
     4501 cagggtctgc cggtcccaga cctcgaagga gtgggcgaaa ccgaggtcgt gcagctggct
     4561 gtaggcctcg atcatcgccg ggctgatcca ggtgccatcc tggcccgggc ggggcgcggc
     4621 ggcacaggcc tgcatcaccc ggctgaaggc cgtgtcggcg gtgacttccc acgtgctgcc
     4681 gcgcagctgg cgacggaagc ggctggacag gtgcacaccc tcggtgcgga acaccatgcg
     4741 cgggtccggc gaccaccaca ggatcggctc gccctcgctg aaccatggaa agatgccgcc
     4801 ggcataggcg ttcagcagtc gcaccgggtg caggtcgccg cctaccgcga gcaggccatc
     4861 gggctggcgc agcgcggtct cggccggcgg gaagggggcg tccggcgcat cggccaggcg
     4921 ccaggggagc gggcgggtca tgcaggcaat tgtattcgcg gtaggcatgc gcgatgtctg
     4981 gcaccatcac cttcccgcgg caaggagcct atgcatgagc gacccgatca gcgccgttct
     5041 cgatgtgcac gacagcccgc gcacacgcaa cgacagcctg ggcacgctgc tgtcgctggc
     5101 tgctgagcag ccgcgccagc tgggcgagct gatgctgcag gcgctggcgc ggcgctcgcc
     5161 gggctcggcc ttcctcgaca tggcactgga cctggtgccg gatgaggtgg tgcccgcggt
     5221 tgccaccgac gcctggcggc gctatcgcga cggcgagcgc ggcgaactgc tggccagcgt
     5281 gatcgagttt gccagctacc aggcaccgaa ggtgctgcag gacgattggg atgcgctgct
     5341 ggccgtggcc atcgaagatg agctgcaact ggcctcgcag ctgtggcggg cgctgccgcc
     5401 tgcggtggct gcgggctggg cgcaggtcct ggccgaggcc gatgatgatc gcgaaatgcc
     5461 gcgggcgcgg gcgctgttgt tggccgcgca gcccgcgacc tatgccgccg cgcgcggcta
     5521 tctggccggc tgggggcagc tggacgccga ggcctgggca cattgggccg gcgttgccga
     5581 cgggccgcat ccgcggcgcc tgcatggaga gcagccgctg cacatccgtt tcggcggtgc
     5641 gcagcatcgc gcccagctgg ccaacgagcc gggctggcgc aagcgcatct ggcgcctgca
     5701 ccccacctgg agcggcggtc aggttcatca cgccggccat atgggtgggc ggctggaggc
     5761 gctgtgcggg agctgccatg caccactgca gcgcctgctg cagaccgacg ccgccgtgct
     5821 gcagccgggc gcggcagggg agatcacact tgcggtctgc ctggactgct gtggctggga
     5881 ggagccgccg gtgcgcttct atcgccatga tggcgcaggc cggcccagct gccatccccg
     5941 ccagtaccgc gacgtgccga gcacgcctac cgacagcggc gatctgatgc cggccgatgt
     6001 cggcctggcg tccctggaca gcgcgcgctg gcggcagcag gactggggcc agtccaatca
     6061 tcggcagaat ctctcgcgcg tgggtggccc gcccagctgg gtgcagagcg cctggtaccc
     6121 ggcgtgcatc gattgtggcc aggacatgcc gttcgtgatg cagctggatt cgacattgcc
     6181 gaccacgggt gagagcacgc tgctgtgggg cagcggtggc atgctctaca cgttctggtg
     6241 cgcgaagtgc cgggtgagcg ggcacttctg gcagtgcacc tgagcgcagc attcccgcca
     6301 gcgctttggc gggtggcaac cgtaggccta ttgatctggt aggtgccaac cttggttggc
     6361 gcgcatttcg gcatcgccca agtcgagcaa gctcgactct acggatgcgt gcggctgtcg
     6421 ctattgccct ggtgggtgtc aaccttggtt ggcacgctcg cggaacggcc catgcccctg
     6481 cagttcctgc tggtaacgcc gcacatcgcg acgctcctgt cggcaccagt cctgcagcgc
     6541 atttgcgaac tccgcatcgg ccacccagtg ccggctgcgc acccgcgtcg gcaggaagcc
     6601 gcgcgccagc ttgtgctcgc cctgcgcgcc cggctcgaag cgcgccagcc cttcgcgcag
     6661 gcagtactcg atgccttggt agtagcacgc ctcaaaatgc aggccgggca gggtggcgcc
     6721 accccagtag cggccaaaga gcgtgtcacc cccgcgcagg cacagtgcgc cggcaatcgg
     6781 ttcgccgtcc tgctcggcca ggaacaacac cagcccgcgg ccaagcgtaa tggccagatg
     6841 gcgcaggaag gcttccgtca gtgccggcgc atttccgtac tccatgaagg tctgcaggta
     6901 gaagcggtac atcgcctgca ggtcggcacg actggcctcg tcgccgtgca ccacgcggaa
     6961 ggtgatgccc tggcgggcga ccttggcgcg ctcctggcgg atgttcttgc ggtgcttgtg
     7021 gtccatcgcg ccgaggaact gctcgaacgt ggcccagtcg cccgggttct gccactggaa
     7081 ctgcacatcc tcgcgcagca gccagtcatc gccgaacagg gcttcttcgc tggcgctgtg
     7141 gaagttgacg tgggccgaag acacattcag caacggcagc tgcgcgcaca gtgccgccag
     7201 cagtgtggcc cggtctgaat cgtgacgggc cagcaaccgc gggccggtga ccggcgaata
     7261 cggcaccgca cccagccact tcgggtagta gtcgcgacca tgccgggcat aggcgttggc
     7321 ccaggcgtgg tcgaacacga attcgccgtg cgagttggtt ttcaggtatc cgggaatggc
     7381 gcccatcagg acgtcgccgt cccatagcgt gaagtgctgc ggctgccagc cccagtcctc
     7441 gcgcaggcag ccgtgatctt ccagtccgga caggaacgcg tggctgacga aggggttgtg
     7501 gccatcgtgc agggcgtccc aatcggtggc gcgaatggcc tgcagggagt cgaggaagcg
     7561 ggtggagggc atgaggggaa aggataggcc agatgggggc cgattgccct agacggcttt
     7621 gaaggcgatg agaaaaatac gaaatcacag caaaggagac cctgtgcagt gccattcggt
     7681 ttcacatacg gatagtgcca ggggcgaccg ttggatcgtc cagccattac cgaataggaa
     7741 agcagcatga ttgctaccgc gttgaccgca atgcttgcgt tgacgggcca ggtcgaggcc
     7801 gagcagcctg cgttccggcg aggtcctgtt gattcggatt ctgcaatgaa tgccattgtc
     7861 actcgcgcaa gccaggacgc gcttgatgcc taccgtcgac agaatcacag gaaaaacccg
     7921 ttggaagccg ttgctgtgta cgacgtagcg accgggctga tccgaatcga tctaagggga
     7981 ggggagttgc ctggggaggg cggcgcagaa ttggaagacc tgcaagggtt catttcgaat
     8041 ggtgctcttg aagccgccag acccattgtc ccagctacag gaacgaagtt cttctacaac
     8101 ggcagagaat tcgatgagca gtatccggac gactccgcag gcaacggtgg ccaggaatcc
     8161 ccgccggcaa ggttggctgg cctatgagaa tggaggggta tgaggcgttc acgatggcat
     8221 gaccttcgcg agagccctga gtcgagcatg gctcgacgct acaacggtga ggggcggtcc
     8281 atgggcgcgg cacagatttg ggcgttgtcc tatttcgagg tagccggtgc gttcctagca
     8341 tcgctggtgg aaagactgct ttccgtctgc cgacgcccgc acaggggccg gtcggcccct
     8401 ctacctattg gagtactaca tgatccgaac gtttgccccg ttgtcgtgcg cgctggccgc
     8461 taccgcatcc acgacagcgt tggcaccgcc cacgacatca agggcaatgg cgagtcgttc
     8521 gtgatcgcga tcgagtccag ctactacagg aagtggagcc accaggagtc gtactcgaac
     8581 accatttcga tggacgtcga gtaccgctac atcgcactgg ccgaccatct gccgacggtg
     8641 gtggcgttgg aagatcagcc gctgttcgtg tactcgactg atggcggccc ggcgggcgag
     8701 ggtgtgctca ccgcaaaggt ggagtacctg gcggccgagt aagggttcaa ccctg
//
LOCUS       DAOKIP010000170         8672 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.170,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000170 DAOKIP010000000
VERSION     DAOKIP010000170.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 8672)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8672)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8672
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.170"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..171)
                     /locus_tag="QEL58_003135"
     CDS             complement(<1..171)
                     /locus_tag="QEL58_003135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005414170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2065 family protein"
                     /protein_id="HDS1677574.1"
                     /translation="MKDLFAAVCLVAVLEGLFLFVAPFAWKRMAERLLDLPSPALRSF
                     GGLVLLAGLSLLW"
     gene            complement(239..1102)
                     /locus_tag="QEL58_003136"
     CDS             complement(239..1102)
                     /locus_tag="QEL58_003136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006449475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease modulator HflC"
                     /protein_id="HDS1677575.1"
                     /translation="MKSPIWIAVIVAVALGLLGSVYVVREDQTAMVLNLGKVVRSDIK
                     PGLHFKVPVVETVKVFDRRFQVLDTAPARYFTAEQKDVSVDFFAIGYISNVGDYFRAT
                     GGDPRIANARLAPIITDSLRNQINSRTLQQLVSGDRSELIAEQLKGINEAVAGLGMQM
                     IDLRIKQVDLPTDSQVINDVYERMRAQRKQEAAKLRAEGEEQSLTIRAQADRDSTVLI
                     AEAERDAQRLRGEGDADAARIYGKAGSADPSFYAFYRSLEAYRGSMTDGNGVIVLDKN
                     DPFLQYLKNDR"
     gene            complement(1099..2232)
                     /gene="hflK"
                     /locus_tag="QEL58_003137"
     CDS             complement(1099..2232)
                     /gene="hflK"
                     /locus_tag="QEL58_003137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014038121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsH protease activity modulator HflK"
                     /protein_id="HDS1677576.1"
                     /translation="MAWNTPGGNKGGQGPEDNRRGPFGSRGGGNGGGWGGLPGPLKDL
                     FDGGIMRWVVAAVVLLVLFSSFQLIGEQQRGVVLRFGQFSRILQPGPNFKLPWPIESV
                     TKVNATEIKTFSIQVPVLTRDENIVNVSLNVQYRIDDPQQYLFGTVDANQVLEQSAQS
                     AVREEVGRADLNAVLNNRGPLAVAAEERLQALLKAFKTGLTVTGLTLQDARPPEEVKP
                     AFDEVNGAQQVKERLINEAQAYAAKVVPEARGQASRARTTAEGYKQAVVSKAEGDAQR
                     FSLLQAQYKDAPEVTRKRLWLETVQQVLSENRKVIGGDGRQLIYVPMTGDTRPSTSAP
                     AAVANPDVVMPSLPGAAAEASRDPGRPVGRPTGRPSGREEGSR"
     gene            2386..3381
                     /locus_tag="QEL58_003138"
     CDS             2386..3381
                     /locus_tag="QEL58_003138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012511837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhdH/YhfP family quinone oxidoreductase"
                     /protein_id="HDS1677577.1"
                     /translation="MAPTTPFTAFRIENDDAGYRSGLAQLRVDDLNPGQVLIRAHWSS
                     VNYKDALAGTGKGKILRRFPLVGGIDVAGTVVASTDPDWREGDAVLATGCGLSETRDG
                     GYSQYVRLESRAVIAQPAGLSPREAMVLGTAGFTAALALLRMQDNRQTPDLGPLAVTG
                     ASGGVGALALSIFSRAGYSVHAISGKPDQADFLRAIGASEVLPRAALADTGPLQSARF
                     GGGLDNAGGPMLASLLAQTVPYGSVVSAGLAASPTLDMTVMPFILRGVSLLGVSSANA
                     PRALREEVWARLGNEWKPQHLDRICTAEVGLDGLPAVFERMLAGGSLGRTVVRID"
     gene            3470..3841
                     /gene="pilH"
                     /locus_tag="QEL58_003139"
     CDS             3470..3841
                     /gene="pilH"
                     /locus_tag="QEL58_003139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014648033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twitching motility response regulator PilH"
                     /protein_id="HDS1677578.1"
                     /translation="MARILIVDDSPSQLLGIQRIVEKLGHQILTATDGAAGVETAKAE
                     LPDLVLMDVVMPNLNGFQATRTLARDEATRHIPVILVTTKDQDTDRMWGMRQGAKAYI
                     TKPFSEDELSEVLERVFAGQG"
     gene            complement(3918..4805)
                     /locus_tag="QEL58_003140"
     CDS             complement(3918..4805)
                     /locus_tag="QEL58_003140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaJ domain-containing protein"
                     /protein_id="HDS1677579.1"
                     /translation="MEFKDYYATLGVEPSAGEAEIKTAYRRLARKYHPDVSKEAGAED
                     KFKAVNEAYEALRDPEKRAAYDQLRAQGYRPGEEFNVPPNYGGAGGFNFEEVFGGGGP
                     NGGFSDFFESLFARQRGGAGPGPGFSSQGHAPNRDTRAKLSVPLEAAYNGDSLRITVN
                     GKQLDVRVPKGIRPGQVIRLAGQGNHGGNLLLEVEYAAHPQFEVDGRNILYTLPVTPW
                     QAALGTSISVPTLGGAVELKIPADSDAGRKLRLRGRGLPGNPDGDQIVEIEIVAPAAT
                     DEAQKKAYRNLAKAFGETI"
     gene            5067..5549
                     /locus_tag="QEL58_003141"
     CDS             5067..5549
                     /locus_tag="QEL58_003141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019338671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HDS1677580.1"
                     /translation="MTIHVGDRIPEVTLKRIREGIETLDTHSLFDARKVVLFAVPGAF
                     TPTCSARHLPGYVEQFEAFRKRGIDVYCMAVNDPFVMKAWAAEQKVPDGLLMLSDGNA
                     ELTRALGLELDASASGMGIRSRRFALYVVDGVVRAAWIEQPGQFEVSSAEYVLEHLPT
                     "
     gene            5579..6154
                     /locus_tag="QEL58_003142"
     CDS             5579..6154
                     /locus_tag="QEL58_003142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014038125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HDS1677581.1"
                     /translation="MSSKPAKAPKPTAKIPGISDRKTLRDRARRNIEDGAITDSYSAD
                     RKAVIKLLNDALATEYVCVLRYYRHYFMAKGMLADAVKAEFLEHAQQEQAHAGKLAER
                     IVQLGGEPDFNPDTLTARSHAEYKEGSDLRDMVRENLVAERIAIDSYREMINFIGDRD
                     TTTKRILEEILAQEEEHADEFADLLDGWIGE"
     gene            complement(6269..8650)
                     /gene="pbpC"
                     /locus_tag="QEL58_003143"
     CDS             complement(6269..8650)
                     /gene="pbpC"
                     /locus_tag="QEL58_003143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014038126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 1C"
                     /protein_id="HDS1677582.1"
                     /translation="MKRTMTTRLAALRRWLRPLWPWLRWGTAATLALLLVLDFAFPPP
                     LPKQRDTSTLVVAADGTPLRAFADAEGVWRYPASIDSVSPLYLQALLTYEDRWFWRHP
                     GINPLAILRASGQLLRGGRIVSGGSTLTMQVARILDPHTRTPWGKLKQMLRAVQLEVH
                     LSKRQILALYLERAPYGGTIEGVEAASWAYLGKPAAQLSHAEAALLAVLPQAPSRLRP
                     DRHPEAAQKARDKVLSRMAELGAWTPDEVEDARIENVVARSLRPPLHAALLAQRLHSA
                     HPGQARIQSSIDIGLQRTLEERVASYFSTLPERTSAALLVVDNQTLQARAYVGTLAFG
                     DRQRLGHVDMVQAWRSPGSTLKPFLYAMALDDGLIHSESLLVDAPQSFGSYRPGNFDM
                     AFNGPIGAASALRLSLNVPSVDLLQRVGAARFAARLSHAGIQLRFPPGSTPNLSLILG
                     GTGARLEDLVGAFAALNRNGIAGRVRYTDDEPMIERRLASPGASWIVREMLESNPRPG
                     YSVGTFDVGGRPRVAWKTGTSYGYRDAWAIGSTRHYTVGVWVGRPDGTPLPGQYGAVT
                     ALPLMFEVVDSLPRQRGDSAAAPMPASVSQEDICWPTGERAEGLPAVLCQRRMPAYLL
                     EGAAPPTFPEREARRWQPGRQRYLADARSGLRVSADCSAPHEEVAREIARWPALLSPW
                     LSKATREASQLPPLSPDCRDDGREASVALHIDGLNDGATLARAPNAEHGVRLQLRALG
                     SEQAVDWLLDGRWIAQTRGAQLMQREFADPGAHTLTALAADGAWTQVRFNVLR"
BASE COUNT         1370 a         3046 c         2889 g         1367 t
ORIGIN      
        1 ccacagcagg ctcagcccgg ccagcagcac cagcccgccg aagctgcgca gggccgggct
       61 gggcaggtcc agcaggcgct cggccatgcg cttccaggcg aacggggcaa cgaacaggaa
      121 caggccttcc agcaccgcca ccaggcagac ggcggcgaac agatctttca tgggggactc
      181 cggaaaaagc acggggcccg gcatctggcc gggccccgtg gggtaatgcc ctgcgacctc
      241 agcggtcgtt cttcaggtac tgcaggaacg ggtcgttctt gtcgagcacg atcacgccat
      301 tgccgtcggt catggagcca cggtaggcct ccaggctgcg gtagaaggca tagaacgacg
      361 ggtcggccga gccggccttg ccgtagatgc gggcggcatc ggcatcgcct tcaccgcgca
      421 ggcgctgtgc atcgcgctcg gcctcggcga tcagcacggt gctgtcacgg tcagcctggg
      481 cgcggatggt cagcgactgt tcctcgcctt ccgcacgcag cttggccgct tcctgcttgc
      541 gctgcgcgcg catgcgctcg tacacatcat tgatcacctg gctgtcggtc ggcaggtcca
      601 cctgcttgat gcgcaggtcg atcatctgca tgcccagccc ggccacggcc tcgttgatcc
      661 ccttcagctg ctcggcgatc agctcgctgc ggtcgccgga gaccagctgc tgcagggtgc
      721 gcgagttgat ctggttgcgc agcgagtcgg tgatgatcgg ggccaggcgg gcattggcga
      781 tgcgcggatc gccgccggtg gcacggaagt agtcacccac gttggagatg tagccgatgg
      841 cgaagaagtc gacgctgacg tccttctgct cggcggtgaa gtagcgcgcc ggcgcggtgt
      901 cgagcacctg gaagcggcgg tcgaagacct tcaccgtttc caccaccggc accttgaagt
      961 gcaggcccgg cttgatgtcc gaacgcacca ccttgcccag gttcagcacc atggcggtct
     1021 ggtcctcgcg gaccacgtac accgagccaa gcaggcccag cgccaccgcc acgatcacgg
     1081 cgatccagat tggactcttc atcggctgcc ctcctcacgg ccgcttggtc gcccggtcgg
     1141 gcggcccacc ggccggcccg gatcacggga agcttccgcc gctgcacccg gcagcgacgg
     1201 catcaccacg tccgggttcg ccactgcggc cggggccgag gtgctgggac gggtatcgcc
     1261 ggtcatcggc acgtagatca gctggcggcc atcgccaccg atcaccttgc ggttctcgct
     1321 cagcacctgc tgcacggtct ccagccacag gcgcttgcgg gtcacttccg gggcgtcctt
     1381 gtactgggcc tgcaacaggc tgaagcgctg cgcgtcaccc tcggccttgg acaccacggc
     1441 ctgcttgtag ccctcggcgg tggtacgggc gcgcgaggcc tggcctcggg cttccggcac
     1501 gaccttggcg gcgtaggcct gggcttcgtt gatcaggcgt tccttgacct gctgggcgcc
     1561 gttgacctcg tcgaaggccg gcttcacttc ctccggcgga cgggcgtcct gcagggtcag
     1621 gccggtcacg gtcaggccgg tcttgaacgc cttcagcagc gcctgcaggc gctcttcggc
     1681 ggccacggcc agcgggccac ggttgttcag cacggcattg aggtcggcgc gaccaacttc
     1741 ctcacgcacc gcgctctgcg ccgactgctc cagcacctgg ttggcatcaa cggtgccgaa
     1801 caggtactgc tgcgggtcgt cgatgcggta ctggacgttc agcgagacgt tgacgatgtt
     1861 ctcgtcacgg gtcagcaccg gcacctggat cgagaaggtc ttgatctcgg tggcgttgac
     1921 cttggtgacc gattcgatcg gccacggcag cttgaagttc ggtccgggct gcaggatccg
     1981 cgagaactgg ccgaagcgca gcaccacgcc acgctgctgt tcgccgatca gctggaagct
     2041 ggagaacagc accagcagca ccacggctgc caccacccaa cgcatgatgc cgccgtcgaa
     2101 caggtccttc agcggcccgg gcagtccgcc ccagccacca ccattgccac cgccgcgcga
     2161 cccgaacggc ccgcgtcgat tgtcctcggg gccttgtccg cccttgttgc cgccgggtgt
     2221 attccaggcc atgcacgctc catcaagatg tgggctgcgg cgcgggccct tcccgcggcg
     2281 ccagccgtga aaccattacc gatcatacaa gatggggcgg atcggcagga tcgaaagggg
     2341 ggcaacgggg taaggtggcg ttttcctcga agtcaggcag cgccgatggc ccccaccacc
     2401 ccgttcaccg ccttccgcat cgaaaacgac gacgccggct accgcagtgg cctggcccag
     2461 ctcagggtgg acgacctcaa ccctggacag gtgctgatcc gcgcccactg gtcctcggtc
     2521 aactacaagg acgccctggc cggcaccggc aaggggaaga tcctgcgccg tttcccgctg
     2581 gtgggcggca tcgacgtggc cggcaccgtg gtcgccagca ccgacccgga ctggcgtgaa
     2641 ggcgacgcgg tactggccac cggttgcggc ctcagcgaga cccgtgacgg cggctacagc
     2701 cagtacgtgc ggctggagtc acgcgcggtg atcgcgcagc cggccgggct gagcccgcgc
     2761 gaggcgatgg tgctgggcac cgccggcttc actgccgcgc tggcgctgct gcgcatgcag
     2821 gacaaccggc agaccccgga cctcggcccg ctggcggtca ccggcgccag cggtggcgtc
     2881 ggtgcgctgg cgctttcgat cttcagccgt gccggctaca gcgtgcacgc gatcagcggc
     2941 aagccggacc aggccgactt cctgcgcgcc atcggtgcca gcgaggtgct gccgcgcgcg
     3001 gcgctggccg acaccggccc gctgcagtcg gcgcgcttcg gcggtggcct cgacaatgcc
     3061 ggcggcccga tgctggccag ccttctggcg cagaccgtgc cctatggcag cgtggtcagc
     3121 gccggcctgg ctgccagccc gacgctggac atgacggtga tgccgttcat cctgcgcggt
     3181 gtgtcgcttc tgggcgtgtc ttcggcaaac gcaccacgcg cgctgcgcga ggaagtgtgg
     3241 gcacgcctgg gcaacgagtg gaaaccgcag cacctggacc gcatctgcac cgccgaggtc
     3301 ggccttgatg gcctgccggc ggtgttcgag cggatgctgg ccggcggctc gctgggccgc
     3361 accgtggtgc ggatcgactg aacgtcgcag gcaggcgacg gacggcacgc gcgcccctcc
     3421 cgccggtaat gtgcccgcac tacactgcgg gcattacatg gggaacaaca tggcacgcat
     3481 tctgatcgtc gacgactcac cgtcgcagct gttggggata cagcgcatcg tcgagaagct
     3541 cgggcaccag atcctgaccg ccaccgatgg cgccgccggg gtcgaaaccg ccaaggccga
     3601 gctgcccgac ctggtcctga tggacgtggt gatgcccaac ctcaacggct tccaggccac
     3661 ccgcaccctc gcccgcgacg aggccacccg gcacatcccg gtgatcctgg tgaccaccaa
     3721 ggaccaggac accgaccgca tgtggggcat gcgccagggc gccaaggcct acatcaccaa
     3781 gccgttctcg gaagacgaac tgtccgaggt gctggagcgg gtgttcgccg ggcagggctg
     3841 aagcctgctc cggtgggtgc caaccttggt tggcacgctt ttgcttggtg ggtgccggcc
     3901 agcggccggc actaccttca aatggtttcg ccgaacgcct tggccaggtt ccggtaggcc
     3961 ttcttctgcg cctcgtcggt cgcagccggg gccacgattt cgatttcaac gatctggtcg
     4021 ccgtccggat tgcccggcag gccgcgcccg cgcaggcgca gcttgcggcc ggcatcggaa
     4081 tcggccggga tcttcagctc caccgcaccg cccagggtcg gtacgctgat gctggtgccc
     4141 agcgcggcct gccatggcgt gaccggcagc gtgtagagga tgttgcggcc atcgacctcg
     4201 aactgcgggt gcgcggcgta ctccacttcc agcagcaggt tgccaccgtg gttgccctgc
     4261 cctgccaggc ggatcacctg gcccgggcgg atgcccttgg gcacgcgcac gtccagctgc
     4321 ttgccgttga cggtgatgcg caggctgtcg ccgttgtagg ccgcctccag cggaaccgac
     4381 agcttggcgc gggtatcacg gttgggcgca tgcccctggc tgctgaagcc cggccccggg
     4441 ccggcaccgc cacgctggcg tgcgaacagg ctctcgaaga agtcgctgaa gcctccattg
     4501 gggccgccac cgccgaacac ttcctcgaaa ttgaagccac cggcgccgcc gtagttcggc
     4561 ggcacgttga attcctcgcc cgggcggtac ccctgcgcgc gcagctggtc ataggcggcg
     4621 cgcttctcgg gatcgcgcag cgcctcgtag gcctcgttga ccgccttgaa cttgtcttcg
     4681 gccccggcct ccttgctgac atccgggtgg tacttgcgtg ccagccggcg ataggcggtc
     4741 ttgatctccg cctcgcccgc gctcggttcc acccccaggg tggcgtagta atccttgaat
     4801 tccatccagc tacctcgatt cgcttcggcc gcgccggtgg cgccgccccg ggttcattct
     4861 acgcgccagc gatgctacgc cgcccatcgt gcggccccgg tgaggccgac tgatcctgcg
     4921 caatgcggct gccatcccga tgccccaggc tgtggctgga agcccccgcc gcaaagcctg
     4981 aagatggggc ctgcacacgg gttttccaat gtcttgacgc ccctgtccca tgccggccac
     5041 tagcctgccc ctgcaaggag ttcaccatga ccatccacgt tggcgaccgc atcccggaag
     5101 tgaccctcaa gcgcatccgc gagggcatcg aaacgctcga tacgcattcg ctgttcgacg
     5161 cacgcaaggt ggtgctgttc gccgtgcccg gtgcgttcac cccgacctgc tcggcccgac
     5221 acctgcccgg ctacgtcgag cagttcgagg cgttccgcaa gcgcggcatc gacgtctact
     5281 gcatggcggt caacgatccg ttcgtgatga aggcctgggc ggccgagcag aaggtgcccg
     5341 atggcctgct gatgctgtcc gatggcaatg ccgaactgac ccgcgcgctc ggcctggaac
     5401 tcgatgccag cgcctcgggc atgggcatcc gctcgcgccg cttcgccctg tacgtggtcg
     5461 acggcgtggt gcgcgcagcc tggatcgaac agcccggcca gttcgaagtc tcttcagccg
     5521 agtacgtgct ggagcacctg cccacctgac taccaaccgc aagaggaaac ggccagccat
     5581 gtccagcaag ccagccaaag cccccaagcc caccgcgaag attcccggca tcagcgaccg
     5641 caagaccctg cgtgaccgcg cccgccgcaa catcgaggat ggtgcgatca ccgacagcta
     5701 cagcgccgac cgcaaggcgg tgatcaagct gctcaacgat gccctggcca ccgagtatgt
     5761 gtgcgtgctg cgctactacc ggcactactt catggccaag ggcatgctgg ccgacgcggt
     5821 caaggccgag ttcctcgaac atgcacagca ggaacaggca catgccggca agctggccga
     5881 gcgcatcgtc cagctcggtg gcgaacccga tttcaatccc gatacgctga ccgcgcgttc
     5941 gcatgccgag tacaaggaag gcagcgacct gcgcgacatg gtccgtgaaa acctggtggc
     6001 cgagcgcatc gccatcgaca gctaccgcga gatgatcaac ttcatcggcg accgcgatac
     6061 caccaccaaa cgcatcctcg aagagatcct cgcgcaggaa gaggaacacg ccgacgagtt
     6121 cgccgacctg ctggatgggt ggatcgggga atgatctggt agatgcccac cctggtgggc
     6181 gcctttgccg tgtgccaacc caggttggca cctaccagag cacgacgatg tcgttggcgc
     6241 tggaccgagc gccgaccaag gtcggcacct accgcaggac gttgaatcgc acctgcgtcc
     6301 atgccccatc ggccgccagc gcggtcaggg tatgcgcgcc cgggtcggcg aactcacgct
     6361 gcatcagctg cgcgccacgg gtctgtgcga tccagcgccc atccagcagc cagtccaccg
     6421 cctgctcgct gcccagtgcg cgcagctgca ggcgcacgcc atgctccgca ttcggcgcgc
     6481 gcgccagcgt ggcgccatca ttgagcccgt cgatgtgcag tgcgacgctg gcctcgcggc
     6541 catcatcacg gcaatccggc gacaacggcg gcagctgcga ggcctcgcgc gtggccttgg
     6601 acagccaggg cgacagcagc gccggccagc gcgcgatctc acgcgccact tcttcatggg
     6661 gcgcgctgca atcggcggac acccgcaggc cactgcgcgc atcggccaag tagcgctgtc
     6721 ggcccggctg ccagcgccgt gcttcgcgct cggggaaggt tggcggtgcc gcgccctcaa
     6781 gcaggtacgc cggcatccgc cgctggcaga gcacagccgg caagccttcg gcccgctcgc
     6841 cggtcggcca gcagatgtct tcctggctga cgctggccgg catcggtgcg gcagccgagt
     6901 caccgcgctg gcgcggcagg ctgtccacca cttcgaacat cagcggcaaa gcggtgaccg
     6961 caccgtactg gccgggaagc ggcgtgccgt ccggacgccc cacccacacg cccacggtgt
     7021 agtggcgggt gctgccgatc gcccacgcat cgcggtagcc ataactggtg ccggtcttcc
     7081 aggccacgcg cgggcggccc ccgacgtcga aggtgccgac gctgtagccc gggcgcgggt
     7141 tcgattccag catctcgcgc acgatccagc tggcgcccgg cgaggccagg cggcgctcga
     7201 tcatcggctc atcatcggtg taacgcacgc ggccggcgat gccgttgcgg ttgagcgcgg
     7261 cgaacgcgcc gaccagatcc tccagccgcg cgccggtgcc gcccaggatc aacgacaggt
     7321 tgggcgtgct gccgggcggg aagcgcagct ggatgccggc gtgcgacagg cgcgcggcaa
     7381 agcgcgccgc gccgacccgc tgcagcaggt ccaccgaagg cacgttgagc gacagccgca
     7441 acgcgctggc ggcgccgatt ggcccgttga acgccatgtc gaaattgccg gggcggtagc
     7501 tgccgaaact ctgcggtgca tcgaccagca ggctttccga atggatcagg ccatcatcca
     7561 gcgccatcgc gtacaggaat ggtttgagcg tggagcccgg cgagcgccag gcctgcacca
     7621 tgtccacgtg gcccagccgc tggcgatcgc cgaacgccag ggtgccgaca taagcgcgcg
     7681 cctgcagggt ctggttgtcg accaccaaca gcgctgcaga cgtgcgttcc ggcagcgtcg
     7741 agaaatagct ggccacgcgt tcttccagcg tgcgctgcag gccgatgtcg atgctgctct
     7801 ggatgcgtgc ctggcccgga tgcgccgaat gcaggcgctg ggccagcagc gcggcgtgca
     7861 gcggcggccg cagcgagcgt gccaccacgt tctcgatgcg cgcgtcctcc acctcgtccg
     7921 gcgtccatgc acccagttcg gccatgcgtg acagcacctt gtcgcgcgcc ttctgcgccg
     7981 cttccgggtg gcggtccggg cgcagccggc tcggcgcctg cggcagcacc gccagcaacg
     8041 cagcctcggc gtgcgacaac tgcgccgccg gcttgcccag gtaggcccag ctggccgctt
     8101 ccacgccctc gatggtgccc ccgtaaggcg cgcgctccag gtacagggcc aggatctgcc
     8161 gcttgctcag gtgcacttcc agctgcaccg cgcgcagcat ctgcttgagc ttgccccacg
     8221 gcgtgcgcgt gtgcgggtcg aggatgcgtg cgacctgcat ggtcagggtc gaaccgccgg
     8281 acacgatgcg gccgccgcgc agcagctggc cactggcacg caggatcgcc agcgggttga
     8341 tacccggatg ccgccagaac cagcggtctt cgtaggtcag cagcgcctgc aggtacaacg
     8401 gcgagacgct gtcgatcgac gccggatagc gccacacgcc ttcggcatcg gcaaatgcac
     8461 gcagcggcgt gccgtcggca gccaccacca gggtgctggt atcgcgctgc ttcggcagcg
     8521 gcggcgggaa ggcgaaatcc agcaccagca gcagcgccag cgtagcggcc gtgccccatc
     8581 gcagccacgg ccacagcggc cgcagccagc ggcgcagggc cgccagccgg gtcgtcatcg
     8641 tgcgtttcat tgcaggttgc cagggggacg gg
//
LOCUS       DAOKIP010000171         8663 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.171,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000171 DAOKIP010000000
VERSION     DAOKIP010000171.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 8663)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8663)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8663
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.171"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(303..1868)
                     /locus_tag="QEL58_003144"
     CDS             complement(303..1868)
                     /locus_tag="QEL58_003144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdiU family protein"
                     /protein_id="HDS1677583.1"
                     /translation="MDTDSPRFDNRLLHSLPGDPESGPRRREVLGAAWSPVMPTPVAA
                     PALLGWSPEVARMLGFDAADVESEGFAQVFGGNALYAGMQPWAANYGGHQFGHWAGQL
                     GDGRAISLGELVAPDGRHWELQLKGAGPTPYSRGADGRAVLRSSIREFLCSEAMHHLG
                     VPTTRALSLVGTGEDVVRDMFYDGHPRAEPGAIVCRVSPSFLRFGSFELPASRGEIAL
                     LQQLVDACIARDFPELEGQGEALYGDWFAQVAVRTAEMIAHWMRVGFVHGVMNTDNLS
                     VLGLTLDYGPYGWVEDFDPDWTPNTTDAQGRRYRFGTQPQVAYWNLSRLAQALAPLFA
                     DVAPLQAGLAAYQSTFVACTRRDAAAKLGLAAADDDDLQLYLRWQQLMQDGAMDMTLA
                     WRALMRIDPAAPDAAVLDAVYYDETRQQAVRAPLQQWLQDYATRLRADPLSASERAMK
                     MAAANPLYVLRNWLAQEAIDRAEQGDLGGVHALQEVLRDPYTERAGLEHFAGKRPAWA
                     DNRAGCSMLSCSS"
     gene            complement(1901..2590)
                     /locus_tag="QEL58_003145"
     CDS             complement(1901..2590)
                     /locus_tag="QEL58_003145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase"
                     /protein_id="HDS1677584.1"
                     /translation="MRIVHHLENSRSLRVLWMLEELGLDYELRRYPRDPKTLLAPPEL
                     RNVHPLGKSPVLQDGELVLAESGAILDYLADRYDTQRQLSPSAMPAEGAERIAYRYWL
                     HYAEGSAMPPLLLTLVMGRIRNAPMPFFARPIARSIADKAERGFIGPQRRLHLDWMER
                     RLAESPWFAGERFSAADIQMSFPIQAAAARGGGLDDKPALRGFLKRIGERPAYQRAEA
                     HGGHLQALSGN"
     gene            complement(2773..2982)
                     /locus_tag="QEL58_003146"
     CDS             complement(2773..2982)
                     /locus_tag="QEL58_003146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009597534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HDS1677585.1"
                     /translation="MSDRQTGTVKWFNDAKGFGFITPESGPDLFVHFRAIQGTGFKTL
                     QEGQKVTFIAVQGQKGMQADQVQAV"
     gene            3284..3772
                     /locus_tag="QEL58_003147"
     CDS             3284..3772
                     /locus_tag="QEL58_003147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YaiI/YqxD family protein"
                     /protein_id="HDS1677586.1"
                     /translation="MTEAETQAEPALPRIWVDADACPGVIRDILFRAAERVGIELTLV
                     ANQWIRTPPSRWLRSIQVPQGLDVADSAIVERVAAGDLVVTQDIPLAALVLEKKAVAL
                     NPRGQLYTPNNMAERLSMRNFMEELRGAGVQTGGPPPLGQRDRQLFAAELDRWLARRP
                     GR"
     gene            complement(3779..4657)
                     /locus_tag="QEL58_003148"
     CDS             complement(3779..4657)
                     /locus_tag="QEL58_003148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010484517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridine synthase"
                     /protein_id="HDS1677587.1"
                     /translation="MTPPSRLQLPPGHWPSLLDGLCARFPRIDRAQWQDRFARGRVQD
                     TQGRALAPDLPWQVGLEIQYFREVADEPVIPFAETIVHLDAHLLVADKPHFLPVTPAG
                     RHVRETLLARLIARTGNPELVPLHRLDRLTAGLVLFSTQPASRDAYQRLFRERRIEKI
                     YEALAPALPGVAFPLQRHSRLVPGEPFFRMAEAPGEPNARSWIELIEAEGPIWHYRLR
                     PATGRKHQLRVHMAALGAPIEGDDLYPQLRSRPEGAVEPPLQLLAQGLAFDDPLSGER
                     RQFSSQRRLCLPDQAG"
     gene            4782..5330
                     /locus_tag="QEL58_003149"
     CDS             4782..5330
                     /locus_tag="QEL58_003149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010484514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YaeQ family protein"
                     /protein_id="HDS1677588.1"
                     /translation="MALTATIRKAELQISDMDRGYYATHNLTLAQHPSETDERLMVRL
                     LAFALNAGDRLEFGRGLSTDDEPDLWEHDYTGDILQWIDLGHPDESRIRKASNRSRQV
                     QVVNYGGNASDIWWTKQGKGLARFDNLSVVDLDGAFVEQWGQQIQRAMRFSVLIQDGE
                     VQILNDQIQLDIIPNWRKRAKA"
     gene            5327..6511
                     /locus_tag="QEL58_003150"
     CDS             5327..6511
                     /locus_tag="QEL58_003150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014036872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HDS1677589.1"
                     /translation="MSTIRCDVVVIGAGAAGLMTAITAGQRGRQVQVIDHANKIGKKI
                     LMSGGGRCNFTNTGTTPANFLSANPHFCKSALARYTPWHFIELVSKHGIAYHEKELGQ
                     LFCDVSSKQIVKMLVDECQAAGVQVRTDCSVQRIEHGSDGFRVHTSHGLFHCASLVVA
                     TGGLSIPSMGATGFGYEIARQFGHAVLPTRAGLVPLTLSGKHQERLAELSGVALPIEA
                     RCNGKSFQNFMLLTHRGVSGPAILQISSFWQPGDTLELDLLPGQDAGEWLRQMKRERP
                     AAELRTVLGEVLPKRLAQRLCEHWLPDRPVRQLDEPVLRQAAQLLGAFPLVASGTEGY
                     RTAEVTLGGVDTAEVSSSTMESRRVPGLHFVGEVLDVTGWLGGYNFQWAWASGHAAGG
                     VV"
     gene            6603..>8663
                     /locus_tag="QEL58_003151"
     CDS             6603..>8663
                     /locus_tag="QEL58_003151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011037435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HDS1677590.1"
                     /translation="MQNANDITIRLLIVDDSGENAEAIVSALRNSGIAVRPWRPQDAA
                     ELAQVLDSQAIDLVLASPSPGIPLPLVAQHIAASGKDIPLVLLAERIDEDELVQASSH
                     GIRALALRQRPEHLLAVVRDQWVDLQARRGLRRIEAQMRETERRCDALIASSRDPIAY
                     VHEGMHIRANDAYLEMFGYEHFDDIEGISLLDMVAAQHVEGFKQLLKGLSRGEAPPPQ
                     YQLDARHEDGSAFPATMEFTAATYEGESCLQVVLRRRMEFDPELAREVEDLRQRDQVT
                     GLLNRPTFMLQLESAVAQAGRSEGQFGLLLIEPDHYARLLPDIGLASADALIGALAAL
                     LAEVVGEDAQLARFGEHNFAVLQAGPYAQTVALAERIREAYAAHVFSIGARSATVTVS
                     IGGVQVGEKIASIGQVLARASECTQAAAELGNTCRIFDPAAADRVEEERVLRWVARIR
                     EALAGDGFQLHYQPVLNLQGEPLELYEAYLRLEHNGELLSPTAFLGIAEEHGLLADIN
                     RWVVSRAIAVLGQRAREGHATQVLVKVTPESFDDPQMIATLRRELQAQGVPGERLWLH
                     APEAKVFTHLRSAQQFLAEVAPLGCRIGLEQFGSGLDSFQLLAHFQPQFLKLDRGFTS
                     DLAATRENIDRISQITARAQEAGIRTIAEFVSDANSMTLLFSAGVDYVQGDFVGPALP
                     EMGFE"
BASE COUNT         1496 a         2945 c         2869 g         1353 t
ORIGIN      
        1 cggatccacg ccatgcgtgg atgaatctcc gtcggaatcg aatatttcga gaattgaatg
       61 aaatgtatcc acgtgtcgac caaggtcgac acctacccgc agcagcggga atctgtcgga
      121 ggtggggcgg tgtcggagtg cggggtgtca gccgcatgga tgcggctgcc aagcctacag
      181 ggacgtactt gcggcgtccc cgcactccga caccgccccg ccaagccacg gaatccagct
      241 tttgctctgg ctgttgacct ggcctctgca ggtgcagggc gcagccctgc cgaaacccac
      301 cctcaggaac tgcaggacag catcgagcag cccgcgcggt tgtcggccca ggccgggcgc
      361 ttgccggcga agtgctcgag cccggcgcgt tcggtatacg ggtcgcgcaa cacctcctgc
      421 agtgcatgca cgccaccgag gtcaccctgc tccgcgcggt cgatcgcctc ctgcgccagc
      481 cagttgcgca gcacgtacag cggattggct gcagccatct tcatagcgcg ctcgctggcc
      541 gacagcggat cggcgcgcaa ccgcgtcgcg tagtcctgca gccactgctg caacggcgcc
      601 cgcaccgcct gctggcgcgt ctcgtcgtag tacaccgcgt ccagcaccgc cgcatccggt
      661 gccgccggat cgatgcgcat cagcgcgcgc caggccaggg tcatgtccat cgcgccgtcc
      721 tgcatcagtt gctgccagcg caggtagagc tgcaggtcgt cgtcgtcggc cgcggccagg
      781 ccgagcttgg cggcggcatc gcgacgcgtg catgccacga aggtggactg gtaggcggcc
      841 agaccggcct gcagcggtgc cacgtcggca aacagcggcg ccagcgcctg cgccaaccgg
      901 ctcaggttcc agtacgccac ctgtggctgc gtaccaaagc ggtaacggcg gccctgcgcg
      961 tcggtggtgt tcggcgtcca gtccgggtcg aagtcctcga cccagccgta agggccgtaa
     1021 tcgagcgtga ggccgagcac ggacaggttg tcggtgttca tcacgccatg cacgaaaccc
     1081 acgcgcatcc agtgcgcgat catctcggcg gtgcgcaccg cgacctgcgc gaaccagtcg
     1141 ccatacagcg cctcgccctg cccctccagc tcgggaaaat cgcgggcgat acaggcatcg
     1201 accaactgct gcagcaacgc gatttcaccg cgcgaagccg gcagttcgaa cgaaccgaaa
     1261 cgcaggaacg agggcgacac gcggcacacg atggcgccag gctcggcacg cggatggccg
     1321 tcatagaaca tgtcgcgcac cacgtcttcg ccggtgccga ccagcgacaa cgcacgcgtg
     1381 gtcggcacgc cgaggtggtg catcgcttcg ctgcacagga attcgcggat cgacgagcgc
     1441 agtaccgcgc gaccatcggc accgcgcgaa tacggcgtcg ggcccgcgcc cttcagctgc
     1501 agctcccagt gacggccgtc gggcgcaacc agttcaccca gtgagatcgc acggccatcg
     1561 cccagttgcc cggcccagtg gccgaactga tgcccgccgt agttggccgc ccacggctgc
     1621 atgccggcgt acagcgcatt gccgccgaac acctgcgcga aaccttcgct ctcgacgtca
     1681 gcggcatcga aacccagcat cctggccacc tccggcgacc accccagcag agcgggcgct
     1741 gccaccggcg tgggcatcac cggtgaccag gccgcgccca gcacttcacg gcggcgcggg
     1801 ccggattcgg gatcacccgg cagactgtgc agcaggcggt tgtcgaaacg ggggctgtcg
     1861 gtatccatgg ccttgaagat gggggcgacc gccgcccgcc tcaattgccg ctgagcgcct
     1921 gcaggtggcc accgtgggcc tcggcgcgct ggtaggccgg gcgctcgccg atgcgcttga
     1981 ggaaaccacg cagtgcaggc ttgtcgtcga ggccaccgcc acgtgcagcg gcggcctgga
     2041 tcgggaagct catctggatg tcggccgcgc tgaaccgctc acccgcaaac catgggcttt
     2101 cggcgaggcg gcgttccatc cagtccaggt gcaggcgccg ctgcgggcca atgaagcccc
     2161 gctcggcctt gtcggcaatg ctgcgcgcga tcgggcgcgc gaagaacggc atcggcgcgt
     2221 tgcggatgcg ccccatcacc agggtcagca gcaacggcgg catcgccgag ccttcggcgt
     2281 agtgcagcca gtagcggtag gcaatgcgct cggcgccctc ggctggcatc gctgacggcg
     2341 acagctggcg ctgggtgtcg tagcggtcgg caaggtagtc gaggatcgca ccggattcgg
     2401 ccagcaccag ctcgccatcc tgcagtaccg gcgacttgcc gagtggatgc acgttgcgca
     2461 gctcgggcgg cgccagcagc gttttcggat cgcgcggata gcgacggagc tcgtagtcca
     2521 gccccaactc ttcaagcatc cacagcacgc gcagcgaacg ggagttttcc aggtggtgga
     2581 cgatgcgcat aaggatgatc cttgggaaga cctgcatcgt accgcgcagg atgcataccc
     2641 ctcgtagaat cgagcatgct cgactgtcgt tgcaagcagt cgagcaagct cgactctaca
     2701 aaacggcggg caataaaaaa cgccggaagc tttcgcttcc ggcgttctgg ctacccaacg
     2761 gtagcagacg gattagaccg cctgcacctg gtcagcctgc atacccttct gaccctggac
     2821 ggcgatgaag gtaaccttct ggccttcctg cagggtcttg aagccggtgc cctggatggc
     2881 acggaagtgc acaaacaggt ccgggccgct ttccggggtg atgaagccga agcccttggc
     2941 gtcgttgaac cacttgacgg tgccggtctg acgatcagac atttgactaa ctcctgaaac
     3001 acatgttgaa aaaatcgcag ccaccgggta tcggggccga gactgagttg caggcgttgg
     3061 taaagcggat cgatgagcgg atcgtgagat caactgcacc aggccacgat tcacggtgac
     3121 cctagcaaac acagtgggac gaacgatacg cgtgttttct gcaaaaagcg atagcccgga
     3181 cgttcatggg cagggcccgc ccgctaggcg tgacaagggc tggcagccga tcgtggctaa
     3241 ctccgagtcc ccattcaggt ttttcctacc ctacactggg taaatgactg aagctgaaac
     3301 ccaagctgaa cccgccctcc cccgcatctg ggtggatgca gacgcctgtc ctggcgtcat
     3361 tcgcgacatc ctgttccggg ccgctgaacg ggtcgggatc gagctgaccc tggtcgccaa
     3421 ccagtggatc cgcaccccgc cctcgcgctg gttgcgctcg atccaggtgc cgcagggcct
     3481 ggacgtggcc gacagtgcca tcgtcgagcg ggttgccgcc ggcgacctgg tggtcaccca
     3541 ggacattccg ctggccgcgc tggtgctgga gaagaaggcc gtcgcgctga acccgcgcgg
     3601 ccagctgtac accccgaaca acatggccga gcggctgtcg atgcgcaatt tcatggaaga
     3661 actgcgcggc gccggggtcc agaccggggg cccgccgccg ctggggcagc gcgaccggca
     3721 gctgttcgcc gccgaactgg accgttggct ggcccggcgt cccggccgct gaacggcgct
     3781 accccgcctg atccggcagg cacaggcggc gctggctgct gaactgccgc cgttccccgc
     3841 tgagcggatc atcgaaggcc agcccctgtg ccagcagctg caggggcggc tcgaccgccc
     3901 cctccgggcg cgacctcagt tgcggataca ggtcatcgcc ctcgatcggc gcgcccagcg
     3961 cggccatgtg cacgcgcagc tggtgcttgc ggccggtcgc tggccgcagc cggtagtgcc
     4021 agatcggtcc ctccgcctcg atcagttcga tccagctccg cgcattgggc tcgcccggcg
     4081 cttcggccat gcggaagaac ggctcgcccg gcaccagccg gctatgccgc tgcagtggga
     4141 acgccacgcc cggcagggcc ggtgccagtg cctcatagat cttctcgatg cgccgttcgc
     4201 ggaacagccg ctggtaggca tcgcgtgagg ccggctgcgt ggagaacaac accagcccgg
     4261 ccgtcagtcg atccaggcgg tgcagcggca ccagctcggg gttgccggtg cgggcaatca
     4321 gacgcgccag cagggtttcg cgcacgtgcc ggccggccgg cgtcaccggc aggaagtgcg
     4381 gcttgtcggc caccagcagg tgcgcatcca gatggacgat ggtctcggcg aacggaatca
     4441 ccggctcgtc ggccacctcg cggaagtact ggatctccag ccccacctgc cagggcaggt
     4501 ccggcgccag tgccctgccc tgcgtgtcct gcacgcgacc acgggcgaag cggtcctgcc
     4561 attgcgcgcg gtcgatgcgc gggaaacgcg cgcacaagcc atcgagcagg ctgggccagt
     4621 ggccaggcgg cagctgtaac cggctgggag gggtcatcgg gtccattcct gcggcggaca
     4681 aggacggcaa gcgtgccacg ttgacgctct gccgacagcc cggcaacgga caccccaaga
     4741 gcaaacctct atcattgtcc tctttagtcc acggatcccc catggctctt accgccacca
     4801 tccgcaaggc cgaactacag atcagcgaca tggatcgcgg ctactacgcg acccacaacc
     4861 tgaccctggc ccagcacccg tccgagaccg acgagcgcct gatggtgcgc ctgctcgcct
     4921 tcgccctcaa cgccggtgat cgcctcgaat tcggccgcgg cctgagcacc gatgacgagc
     4981 ccgacctgtg ggaacacgac tacaccggcg acatcctgca gtggatcgac ctgggccatc
     5041 cggacgaatc gcgcatccgc aaggccagca accgcagccg ccaggtgcag gtggtgaact
     5101 acggtggcaa cgcctccgat atctggtgga ccaagcaggg caagggactg gcgcgtttcg
     5161 acaacctgtc ggtggtcgac ctcgacggtg ccttcgtcga gcagtggggc cagcagatcc
     5221 agcgtgcgat gcgcttcagc gtgctgatcc aggatggcga agtgcagatt ctcaacgacc
     5281 agatccagct cgacatcatc ccgaactggc gcaagcgcgc caaggcatga gcacgatccg
     5341 ctgcgatgta gtggtcatcg gcgccggcgc ggccgggctg atgactgcga tcaccgccgg
     5401 ccagcgcggc cgccaggtgc aggtgatcga ccatgccaac aagatcggca agaagatcct
     5461 gatgtctggc ggtggccgct gcaacttcac caacaccggt accaccccgg ccaacttcct
     5521 gtcggccaac ccgcacttct gcaagtcggc gctggcccgc tacacgccct ggcatttcat
     5581 cgagctggtc agcaagcacg gcatcgccta ccacgagaag gagctgggcc agctgttctg
     5641 cgatgtctcg tccaagcaga tcgtgaagat gctggtggac gaatgccagg cagccggcgt
     5701 gcaggtccgt accgactgca gcgtgcagcg catcgaacac ggcagcgacg gtttccgcgt
     5761 acacaccagc cacggcctgt tccactgtgc ctcgctggtg gtcgcgaccg gcgggctgtc
     5821 cattcccagc atgggtgcca ccggtttcgg ctatgagatc gcacgccagt tcggccacgc
     5881 ggtgctgccg acccgcgccg ggctggtgcc gctgacgctc agcggcaagc accaggagcg
     5941 gctggccgag ctcagcggtg tcgccctgcc gatcgaggcg cgctgcaacg gaaagagctt
     6001 ccagaacttc atgctgctga cccatcgcgg cgtgagcggc ccggcgatcc tgcagatttc
     6061 gtccttctgg cagcctggcg acacgctgga actggacctg ctgcccggcc aggatgccgg
     6121 cgagtggctg cgccagatga agcgcgagcg gccggccgcc gagctgcgca cggtgctggg
     6181 cgaggtactg cccaagcggc ttgcgcagcg cctgtgcgaa cactggctgc ccgaccgccc
     6241 ggtgcgccag ctggacgagc cggtgctgcg ccaggccgcg cagctgctgg gcgcattccc
     6301 gttggtggcc agcggcaccg aaggctatcg caccgccgag gtcaccctgg gcggcgtgga
     6361 cactgccgag gtttcgtcct cgacgatgga atccaggcgc gtgcccggcc tgcacttcgt
     6421 tggcgaggta ctggacgtga ccggctggct gggcgggtac aacttccagt gggcctgggc
     6481 cagcggccac gcggccggcg gcgtggtgtg aaccacatcg ccgttcgatg cgcgcaaggg
     6541 gggcgcgcat ggacggttcg gcgcgcatcg tgtatctaga tttgcagatt ggggagcagt
     6601 gcatgcagaa cgcgaacgac atcaccatcc gcctgctgat cgtcgatgac agcggcgaga
     6661 atgccgaagc catcgtcagc gccctgcgca acagtggcat cgcggtgcgc ccgtggcgcc
     6721 cgcaggatgc agccgagctg gcccaggtgc tggacagcca ggccatcgac ctggtgctgg
     6781 cctcgccgtc gccgggcatt ccactgccgc tggtggccca gcacatcgcc gccagcggca
     6841 aggatattcc gctggtgctg ctggccgagc gcatcgatga ggacgagctg gtgcaggcca
     6901 gcagccatgg catccgcgcc ctcgccctgc gccagcgccc cgagcatctg ctggccgtgg
     6961 tccgcgacca gtgggtggac ctgcaggccc gccgtggcct gcgccgcatc gaggcacaga
     7021 tgcgcgaaac cgagcgccgc tgcgacgcgc tgatcgcctc ctcgcgcgac cccatcgcct
     7081 atgtgcatga aggcatgcac atccgggcca acgacgccta tctggagatg ttcggctacg
     7141 agcatttcga cgacatcgaa ggcatttcgc tgctcgacat ggtcgccgcg cagcatgtgg
     7201 aaggcttcaa gcagctgctg aaaggcctca gccgtggcga agcgccgccg ccgcagtacc
     7261 agctcgacgc ccgtcacgaa gatggcagcg cgttcccggc aacgatggaa ttcacggcgg
     7321 cgacctacga gggcgaatcc tgcctgcagg tggtgctccg ccgccgcatg gaattcgatc
     7381 cggagctggc acgcgaagtt gaagacctgc gccagcgtga ccaggtcacc ggcctgctca
     7441 accgcccgac cttcatgctg cagctggaaa gcgcggtggc ccaggccggt cgcagcgaag
     7501 gccagttcgg cctgctgttg atcgaaccgg accattacgc acgcctgctg ccggacatcg
     7561 gcctggcctc ggccgacgcg ctgatcggcg cgctcgccgc cctgctggcc gaggtggtcg
     7621 gcgaggacgc gcagctggcc cgcttcggcg aacacaactt cgccgtgctg caggctgggc
     7681 cctatgcgca gaccgttgcg ctggccgagc gcatccgcga agcctatgcc gcgcatgtct
     7741 tcagcatcgg cgcacgctcg gccacggtga cggtcagcat cggcggcgtg caggtgggcg
     7801 agaagatcgc cagcatcggc caggtgctgg cacgtgccag cgaatgcacg caggccgctg
     7861 ccgagctggg caatacctgc cgcatcttcg accccgccgc tgccgaccgc gtggaggaag
     7921 agcgcgtgct gcgctgggtg gcacgcatcc gtgaagcgct ggccggcgac ggcttccagc
     7981 tgcactacca gccggtgctg aatctgcagg gcgagccgct ggaactgtac gaggcctacc
     8041 tgcgcctgga gcacaacggc gagctgctga gcccgaccgc gtttctgggc attgccgagg
     8101 agcacgggct gctggccgac atcaaccgct gggtggtttc gcgggccatt gcggtgctgg
     8161 gccaacgtgc gcgcgaaggc catgccaccc aggtgctggt gaaggtcacc ccggaatcgt
     8221 tcgacgatcc gcagatgatc gccaccctgc gccgcgaact gcaggcacag ggcgtgccag
     8281 gcgaacggct gtggctgcat gcaccggaag cgaaggtgtt cacccatctg cgcagcgcgc
     8341 agcagttcct tgccgaggtc gcgcccctgg gctgccgcat cggcctggag cagttcggtt
     8401 cggggctgga ttcgttccag ttgctggccc acttccagcc gcagttcctc aagctggacc
     8461 gcggtttcac cagcgatctg gccgccaccc gcgagaacat cgaccgcatc agccagatca
     8521 ccgcgcgtgc gcaggaagcc ggtatccgca ccatcgccga gttcgtcagc gacgccaatt
     8581 cgatgaccct gctgttcagt gccggcgtgg actatgtgca gggcgacttc gtcggcccgg
     8641 ccttgccgga gatggggttc gag
//
LOCUS       DAOKIP010000172         8532 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.172,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000172 DAOKIP010000000
VERSION     DAOKIP010000172.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 8532)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8532)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8532
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.172"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(120..2225)
                     /locus_tag="QEL58_003152"
     CDS             complement(120..2225)
                     /locus_tag="QEL58_003152"
                     /EC_number="2.7.8.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005419944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerol transferase I"
                     /protein_id="HDS1677591.1"
                     /translation="MLWILLLSLLLLCWLFLASDKWVWWKAGAFSLLLLALSAWWLID
                     KLSGDGLNAATLYHLGADMEGAGVADFKGYIAGFIVLALVSLLPLFATRVKRWRRPGQ
                     GSAWFTGFAAVWVATIMISPLARDGQRLYQQLRPVDFARIAPEYQVPTQPLQRPRNIV
                     WIYGESLERTYLDENVFPGLMPNLNRLASESLDVRGLASAEGSGWTIAGLVSSMCGVP
                     LTTSQGDENSMDRMGSFLPKAVCLGDYLKQQGYTNHYLGGANGQFAGKGQFLANHGFD
                     EVHDLAWFKQQKKIGRIHYSAWGVHDDVLLDTAYQRFEQLSRAGSPFMLTTLTMDTHH
                     PAGHLPVSCKGERYQSQYGNINMLNALKCSDRLISQLVQRIQASPYGKDTLIVIASDH
                     LAMPNDLTHILTRQKRENLLLFLGDGVAPRQLAVEDGSTLDSGATLLSLLDPKLQTMG
                     FGRSLLDEKRAPSASVAARREGGRDYPQYLAFARSLWLGEPTRELKIDGDDQVVVGLQ
                     HVQPPVLLEYDKDWGLKSVYLENTSRQFDDANPDNTLAYVDRCTAFEDGSADGDWCAL
                     LVNRDNGIKLYRDNDLRGGIAVDAPLDAFQGPRPSVRQAHMITQKGRRTRAGQYMLQL
                     VASTRPDRGFWIEAVSSQRKVVLAQQWVQPDANGKINVSFGLDHEVDDLEIRAWLNHA
                     EKLAVDTFALVPSRSRPRG"
     gene            complement(2470..4161)
                     /locus_tag="QEL58_003153"
     CDS             complement(2470..4161)
                     /locus_tag="QEL58_003153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005411358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AarF/ABC1/UbiB kinase family protein"
                     /protein_id="HDS1677592.1"
                     /translation="MSNPPTANGNPPLVKGMNRRSQILRLLMRYRHSGVFSGMNLDAA
                     SNQADVPADGNPEQFVSDLEALGPTFVKLGQMLSTRPDMVPVEFATALERMQEKVAEI
                     PVERIHAIVEQELGAPVNKLFASFDAEPLGCASIAQVHRAVLHDGRQVAVKVQKPEVA
                     AQLRSDLEALRSFALAADHLTQVGRRVRLRDWLNEFAKTLMQELDYHAEAENLARFGR
                     HLKPFRRLWIPQPLWDYSSQRVLTMELATGVRVDAIPDVRRTEQSMDPLAAALIRGYL
                     DQIFVHGEIHADPHPGNLRVMPDGRLAIFDLGMVAHMPPRLRERLLKILFAAVDGRGE
                     EVADDLISISTRLEAFDEERYLRETGQLIARYAASGSFSEGRVVLDMVRIATACGLRT
                     PPELSLLGKALLNLETVCRLLAPELETRRIVERQLQHVMRARLKKSLSAANIASEAME
                     LQQLLRDGPRKLSDIMALLAENRLQMKVTGLEESRLMENLQKIANRVAAGIISAALIM
                     AAAMMMKIDTGWHLFGYPLIALILLLIGVVLGLGIVTSALLFDRRARAREERGHR"
     gene            4324..5250
                     /locus_tag="QEL58_003154"
     CDS             4324..5250
                     /locus_tag="QEL58_003154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005419938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF808 domain-containing protein"
                     /protein_id="HDS1677593.1"
                     /translation="MAGASLFALLDDIASLLDDVSVLTKVAAKKTAGVLGDDLALNAQ
                     QVTGVNANRELPVVWAVAKGSLVNKVILVPAALAISALEAWLHSRGWNVPLIVPLMMI
                     GGAFLCFEGVEKLAHRFLHSSDDDAERQAERRKALADAQVDMVAWEKDKVKGAIRTDF
                     ILSAEIIVLTLGVVATATFTNQLLTLAVVALAMTIFVYGLVAGIVKLDDVGLYLSRKG
                     GAIAAFGRGLVASAPWLMKFLSVAGTIAMFLVGGGILVHNVPALHHAVQALGGEGQWG
                     WLIGAVGNMVVGIIAGAIVLAAVSGFQKLRGK"
     gene            complement(5356..6894)
                     /locus_tag="QEL58_003155"
     CDS             complement(5356..6894)
                     /locus_tag="QEL58_003155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014648695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HDS1677594.1"
                     /translation="MTDQPDHRPAPGTALGPPARVRAVVNDGLGDRVVLQGGGGVALQ
                     QLFAGADAPEPLLAAFANGMATLPGELGDMGDRLQSAQASADWPRYGRAMRQLIDKYI
                     RTIEQHSPDGQPESLRLSEQLRLLLGGAVVALLQHDPDLREQAQALATRLRQWQPGTA
                     LEPIEQGVRELGHQVGVRAESWQEQQALLLELFALLLENVSELLDDRSWLQGQIAAVR
                     QLLDGPLEAEAVERTRAELREVIYKQGLLRQGIDDSKAAMRGLMGEFIERMDGMAAST
                     GEYHDRIGSYALQLREARSIADLNQLLQDVMRDTGKVQQQAAQARDHLANARQEVELA
                     EQRIAELEQELRAAGDLARIDPLTQALNRRGLEELLQRELARAARNNSPLGVAMIDMD
                     DFHQTNDAHGHAGGDALLQHLVSVCKLLLRATDGIARLGGDEFVLVLPETQGADSMAT
                     VQRLQRSVAHRVLTVQEKRVPVHFSAGLAQWQPGDDAEALLRRADDALYAAKRQGKNR
                     VQAG"
     gene            7000..7635
                     /locus_tag="QEL58_003156"
     CDS             7000..7635
                     /locus_tag="QEL58_003156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005411355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent dehydratase"
                     /protein_id="HDS1677595.1"
                     /translation="MRVMLLGATGLVGGLALPMLLDDPRCRAVVAPTRRALTLAHPKL
                     YAPVLEFDALPEAPDWAQVDAVICALGSTMAQAGSREAFHRIDHDYPLAFAQLARGQG
                     ARAFVLNSAAGANAGSAIFYNRVKGELERDLRALEFASLTLVRPGLIGGQRQQVRRGE
                     HFALQVLGVLGPLLPRAWRINPAERIARALVDAALAPPPGEHVVASSVLVG"
     gene            7635..8342
                     /locus_tag="QEL58_003157"
     CDS             7635..8342
                     /locus_tag="QEL58_003157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005419932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YafY family transcriptional regulator"
                     /protein_id="HDS1677596.1"
                     /translation="MSRALRLTQLLQLLRRHRRPVAGLTLAGALGISLRTLYRDIETL
                     REQGADLRGEAGIGYQLAPSDTLPPMTLPPAEIDALVLGLRWVAARTEPALAEAARDA
                     LARIAHVLPAARREALRDSGLRVGPSRTAAKVPAARLQAVREAVSAQQRLRFGYEDAR
                     GQRSERIVWPFALGYFDEVPMLAAWCESREDFRHFRLDRIRQVRALEDRYPVPRATLL
                     RRWQKAQGIAPDWLDRS"
BASE COUNT         1297 a         2843 c         2905 g         1487 t
ORIGIN      
        1 tgggtttacg gcgtccccgc actccgacac cgccccgcca tcccacggaa tgccccgctg
       61 ttgctgttgc ctttgctctg gctcgtagcg ggtgcagggc gcagccctgc aaagaaaccc
      121 tacccccgcg gccggctgcg cgagggcacc agtgcgaacg tgtccaccgc cagcttctcg
      181 gcatggttca accacgcacg gatctccagg tcatccactt cgtggtccag cccgaacgac
      241 acgttgatct tgccgttggc atcaggctgt acccactgct gcgccaatac caccttgcgc
      301 tgcgaggaca ccgcctcgat ccagaaaccg cgatccgggc gcgtgctcgc caccagctgc
      361 agcatgtact ggccggcacg ggtgcggcgc cccttctggg tgatcatgtg cgcctggcgc
      421 acgctcgggc gcgggccctg gaaggcgtcc agtggtgcat ccaccgcgat gccgccgcgc
      481 aggtcattgt cacggtagag cttgatgccg ttgtcgcggt tgaccagcag ggcgcaccag
      541 tcgccgtcgg ccgagccgtc ctcgaacgcg gtgcagcgat ccacgtaggc cagggtgttg
      601 tccgggttcg cgtcatcgaa ctggcgcgag gtgttttcca ggtacaccga cttcaggccc
      661 cagtccttgt cgtactccag cagcaccggt ggctgcacgt gctgcaggcc gaccaccacc
      721 tggtcatcgc catcgatctt cagttcgcgg gtcggttcgc ccagccacag tgaacgcgcg
      781 aaggcgaggt actgcggata gtcccggcct ccctcgcggc gtgcggccac gctggcactc
      841 ggtgcacgct tttcatccag cagcgaacgg ccgaagccca tggtctgcag cttcgggtcg
      901 agcaggctga gcagggtcgc gccggaatcg agcgtcgaac cgtcctccac cgccagctgg
      961 cgcggtgcca cgccatcgcc gaggaacagc agcaggttct cgcgcttctg ccgggtcagg
     1021 atgtgggtca gatcgttggg catcgccagg tggtcggagg cgatcacgat cagcgtgtcc
     1081 ttgccgtacg ggctggcctg gatgcgctgc accagctgcg agatcaggcg gtcgctgcac
     1141 ttgagcgcgt tgagcatgtt gatgttgccg tactggctct ggtagcgctc gcccttgcac
     1201 gacaccggca ggtggcccgc cggatggtgg gtgtccatgg tcaacgtggt gagcatgaac
     1261 ggtgagcccg cacgcgagag ctgttcgaag cgctggtagg cggtgtccag cagcacgtcg
     1321 tcgtgcacgc cccaggccga gtagtggatg cggccgatct tcttctgctg cttgaaccac
     1381 gccaggtcgt gcacttcatc gaagccgtgg ttggccagga actggccctt gccggcgaac
     1441 tggccgttgg cgccgcccag gtaatgattg gtgtagccct gctgcttcag gtagtcgccc
     1501 aggcacacgg ccttgggcag gaagctgccc atgcggtcca tgctgttctc gtcgccctgc
     1561 gaggtggtca gcggcacgcc gcacatcgac gacaccaggc cggcgatggt ccagccgctg
     1621 ccctcggccg aggccagccc acgcacgtcc agcgactcgg acgccaggcg gttgaggttg
     1681 ggcatcaggc ccgggaacac gttctcgtcc aggtaggtgc gctccaggct ttcgccgtag
     1741 atccagacga tgttgcgcgg gcgctgcaat ggctgcgtgg gcacctggta ttcgggtgcg
     1801 atgcgggcga aatcgaccgg gcgcaactgc tggtacaggc gctggccgtc gcgcgccagc
     1861 gggctgatca tgatcgtggc cacccacact gccgcgaagc cggtgaacca ggcgctacct
     1921 tggccgggcc ggcgccagcg cttcacccgc gtggcaaaca gcggcagcag cgagaccagc
     1981 gccagcacga tgaaaccggc gatgtagccc ttgaagtcgg cgacgccagc gccttccatg
     2041 tcggcgccca ggtggtacag ggtggcggca ttgagcccat caccggacag cttgtcgatc
     2101 aaccaccacg cactgagtgc aagcagcagc agcgagaacg caccggcctt ccaccacacc
     2161 cacttgtcgg acgcgaggaa caaccagcac agcagcaaca acgacagcag cagtatccag
     2221 agcataggca gcttcggcag tgacggggtg gtggtgatgg acgtcgtacc gacgcgtgtc
     2281 catccgaccg gcgctgccac aagcacatcc acatgacagg ccgatgaccc gatagtgcat
     2341 gcacgaacct gactgaaatg tttgttgaaa tgacgcgcgc gcaatcacgc ccggaaggta
     2401 aaacgagcgt gaagggcttc gttggattgc attaaaaacc gcatgaatac ggcggtttca
     2461 gtggatgcgc taacggtggc cgcgttcctc gcgtgcccgc gcgcgacgat cgaacagcag
     2521 tgcgctggtc acgatgccca gtccgagcac cacgccgatc aacagcagga tcagcgcgat
     2581 gagcgggtag ccgaacaggt gccagccggt gtcgatcttc atcatcatcg cggcggccat
     2641 gatcaatgcg gcgctgatga tgccggccgc cacgcggttg gcgatcttct gcaggttctc
     2701 catcaaccgt gactcttcca gaccggtcac cttcatctgc aggcggttct cggccagcag
     2761 cgccatgatg tccgacagct tgcgcggccc atcgcgcagc agctgctgca gctccattgc
     2821 ttcgctggcg atgttggcgg ccgacagcga tttcttcagg cgcgcgcgca tcacgtgctg
     2881 cagctggcgc tcgacgatgc ggcgggtttc cagctcgggt gccagcagcc ggcacacggt
     2941 ttccaggttg agcagcgcct tgcccagcag gctcagctcc ggtggcgtgc gcaggccgca
     3001 ggctgtggcg atgcgcacca tgtccagcac cacgcggccc tcggagaagc tgccgctggc
     3061 ggcgtagcgc gcaatcaact ggccggtctc gcgcaggtag cgctcctcgt cgaacgcctc
     3121 cagccgggtg ctgatgctga tcaggtcgtc ggccacttct tcgccgcggc catccacggc
     3181 ggcgaacagg atcttcagca gccgctcgcg caggcgcggc ggcatgtgcg cgaccatgcc
     3241 caggtcgaag atcgccagcc gcccgtcggg catcacccgc aggttgcccg ggtgcggatc
     3301 ggcatggatc tcgccgtgca cgaagatctg gtccaggtag ccacggatca gcgccgcggc
     3361 cagcgggtcc atcgattgct cggtgcggcg cacatcggga atcgcgtcca cgcgcacgcc
     3421 ggtagccagt tccatggtca gcacgcgttg gctgctgtaa tcccacagcg gttgcggaat
     3481 ccacagccgg cggaacggct tcaggtgccg gccgaagcgg gccaggttct cggcctcggc
     3541 gtggtagtcc agctcctgca tcagggtctt ggcgaactcg ttgagccagt cgcgcaggcg
     3601 cacgcggcga cccacctggg tcaggtggtc ggcggccagc gcgaagctgc gcagcgcctc
     3661 caggtccgag cgcagctgcg cggccacctc gggcttctgt accttcaccg ccacctgccg
     3721 gccatcgtgc agcaccgcgc ggtgcacctg cgcgatcgac gcgcagccca gtggctcggc
     3781 gtcgaacgaa gcgaacagct tgttcaccgg cgcacccagt tcctgctcga cgatggcatg
     3841 gatgcgctcg accgggatct cggccacctt ttcctgcatg cgctccagcg cggtggcgaa
     3901 ttccaccggc accatgtccg ggcgggtgga cagcatctgg cccagtttga cgaaggtcgg
     3961 tcccagggct tccaggtcgc tgacgaactg ttccgggttg ccatcggcgg ggacgtcggc
     4021 ctggttgctc gcggcgtcca ggttcatgcc cgagaacacc cccgaatggc ggtagcgcat
     4081 cagcaggcgc aggatctggc tgcgccggtt catgcccttg accagcgggg gattgccatt
     4141 ggcggtgggc ggattgctca agcgacactc ccatgcgaca aagttggtag tgccggccgc
     4201 tggccggcaa tgtccggatt ccgcagtgtc gccggggggc ggtaggcacg cggtgaatcc
     4261 gaccgcttcc gcagctgccc cggtatcggt cagaatccgc tcattccctc acttggatgc
     4321 cccatggccg gtgccagcct gttcgccctg ctcgacgata tcgcctccct gcttgacgat
     4381 gtctcggtgc tgaccaaggt cgcggcgaag aaaaccgccg gcgtactggg cgacgacctg
     4441 gcgctgaacg cgcagcaggt gaccggggtc aacgccaacc gcgagctgcc ggtggtgtgg
     4501 gcggtggcca agggctcgct ggtcaacaag gtgatcttgg taccggctgc gctggcgatc
     4561 agtgcactgg aggcgtggct gcacagccgt ggctggaatg tgccgttgat cgtgccgttg
     4621 atgatgatcg gtggcgcctt cctgtgcttt gaaggcgtgg agaaactggc acaccgcttc
     4681 ctgcactcat ccgatgacga cgccgagcgc caggccgagc ggcgcaaggc gctggccgac
     4741 gcacaggtgg acatggtggc gtgggagaag gacaaggtga agggcgcgat ccgcaccgac
     4801 ttcatcctct cggccgagat catcgtgttg accctgggcg tggtggccac cgcgaccttc
     4861 accaaccagc tgctgacgct ggcggtggtc gcactggcaa tgacgatctt cgtctacgga
     4921 ctggtggcgg gcatcgtcaa gctcgatgac gtgggcctgt acctgtcgcg caagggcggc
     4981 gcgattgcgg cgttcggtcg cggcctggtc gcctctgcac cgtggctgat gaagttcctg
     5041 tcggtggccg gcaccatcgc catgttcctg gtcggtggcg gcatcctggt gcacaacgtg
     5101 ccggcactgc atcacgcggt gcaggcactg ggtggcgagg gccagtgggg ctggttgatc
     5161 ggtgcggtcg gcaacatggt ggtcggcatc atcgccggtg ccatcgtgct ggctgcggtg
     5221 agcggcttcc agaagctgcg cgggaaataa gcggcgacgg attccccgat aggggccgac
     5281 cttggtcggt gctttgcttc ccgcacgtgc caaccaaggt tggcacctac cgaagcggtt
     5341 cacgggcgcc gggcgctatc ccgcctgcac ccggttcttg ccctgtcgct tggccgcgta
     5401 cagggcatca tcggcgcgcc gcagcagcgc ctcggcgtcg tcgccgggct gccattgggc
     5461 caaccccgca ctgaaatgca ccggcacacg cttctcctgc acggtcagca cacggtgcgc
     5521 caccgaacgt tgcagccgct gtaccgtggc catgctgtcg gcgccctggg tttccggcag
     5581 caccagcacg aactcgtcgc cgcccagccg ggcgatgcca tcggtggcgc gcagcagcag
     5641 tttgcatacg gacaccaggt gctgcagcag cgcatcgcca ccggcatggc cgtgcgcgtc
     5701 gttggtctgg tggaagtcgt ccatatcgat catcgccaca cccagcggcg agttgttgcg
     5761 cgcggcacgc gccagctcgc gttgcagcag ttcttccagg ccacggcggt tcagtgcctg
     5821 ggtcagtggg tcgatgcggg ccagatcgcc ggcagcacgc agttcctgct ccagctcggc
     5881 gatgcgttgc tcggcaagct ccacttcctg acgcgcattg gccaggtggt cgcgcgcctg
     5941 cgcggcttgc tgctgcacct tgccggtgtc gcgcatcacg tcctgcagca gctggttgag
     6001 gtcggcgatg ctgcgcgctt cgcgcagctg caacgcgtag ctgccgatgc gatcgtggta
     6061 ctcgccggtg ctggcggcca tgccatccat gcgctcgatg aactcgccca tcagcccgcg
     6121 catcgctgcc tttgaatcat cgatgccctg gcgcagcagg ccctgcttgt agatcacttc
     6181 gcgcagctcg gcgcgggtgc gctccaccgc ttcggcttcc agcggcccgt ccagcagctg
     6241 gcgcaccgca gcgatctggc cctgcagcca gctgcggtcg tccagcagtt cgctcacgtt
     6301 ctccagcagc agcgcgaaca gctccagcag tagcgcctgc tgctcctgcc agctctccgc
     6361 gcgcacgccg acctggtggc cgagttcgcg cacgccctgt tcgatcggtt ccagggccgt
     6421 gccgggctgc cactgccgca ggcgcgtggc cagcgcctgc gcctgctcgc gcaggtccgg
     6481 gtcatgctgc agcagcgcga ccactgcgcc gcccagcagc agccgcagct gctcggacaa
     6541 gcgcaggctt tcgggttgcc cgtccggtga atgctgctcg atggtgcgga tgtacttgtc
     6601 gatcaactgc cgcatcgcac gcccgtagcg cggccaatca gcactggcct gcgccgattg
     6661 caggcggtcg cccatgtcgc ccagctcgcc gggcagggtg gccatgccgt tggcgaacgc
     6721 ggccagtagc ggttctggtg catcggcgcc ggcaaacagc tgctgcaggg ccacgccgcc
     6781 gccgccctgc agcaccacgc ggtcgcccag cccgtcattc acgaccgcgc gcacgcgtgc
     6841 cggcggccca agggcagtac cgggggcggg gcggtggtcg ggctggtccg tcatggagca
     6901 aatcctgggg ctggcaggga ctggttccag catatcggcg cggccgccga cggcttgaac
     6961 ggctaggatg ggcgacagga tgccgcagtg gaggtagtga tgcgcgtgat gctgctgggg
     7021 gcaaccggcc tggtcggtgg gctggccctg ccgatgctgc tggacgaccc gcgctgccgt
     7081 gccgtggtgg ccccgacccg gcgggcgctg accctggccc acccgaagct gtacgccccg
     7141 gtgctggagt tcgacgccct gccggaggcg cccgactggg cgcaggtgga tgcggtgatc
     7201 tgcgcgctgg gcagcacgat ggcccaggcg gggagccgtg aggccttcca tcgcatcgac
     7261 catgactacc cgctggcgtt tgcgcagctg gcccgcggcc agggcgcgcg tgctttcgta
     7321 ctgaattcgg cagcgggggc caatgcaggc tccgcgattt tctacaaccg ggtgaagggt
     7381 gagctggagc gcgacctgcg cgcgctcgag tttgcgtcgc tcaccctggt gcggcccggc
     7441 ctgattggcg ggcagcggca gcaggtgcgc cgtggcgaac acttcgccct gcaggtgctg
     7501 ggcgtgttgg gaccgttgct gccgcgggcg tggcggatca atcctgccga acggattgcc
     7561 agggcgctgg tagatgccgc gctggctccg ccccccggcg agcacgtggt ggcatccagc
     7621 gtactggtcg gctgatgtcg cgtgcgctgc gcctgaccca gctgctgcag ctgctgcgcc
     7681 gccatcggcg gccggtggcg gggctgacgt tggccggcgc gctgggcatc agcctgcgca
     7741 cgctgtaccg cgatatcgag accctgcgcg agcagggtgc cgacctgcgc ggggaagccg
     7801 gcatcggcta ccagctggcg ccgagcgata ccctgccgcc gatgaccctg ccaccggccg
     7861 agatcgatgc attggtactg ggcctgcgct gggttgcggc ccgtaccgaa cccgcgttgg
     7921 ccgaagccgc acgcgatgca ttggcgcgca tcgcgcatgt gttgcctgca gcacggcgcg
     7981 aggcattgcg tgacagtggc ctgcgcgtag gcccttcgcg aacggcggcc aaagtgccgg
     8041 cggcgcgcct gcaggccgtg cgcgaggcgg tcagtgcgca gcagcgcctc aggtttggtt
     8101 atgaggatgc gcgcggccag cgcagcgaac gcattgtctg gccattcgcg ctgggctact
     8161 tcgatgaagt gccgatgctg gcggcctggt gcgagagccg cgaagacttc cgccatttcc
     8221 gcctggaccg catccgccag gtgcgcgcgc tggaggaccg ctaccccgtg ccgcgtgcaa
     8281 ccctgctgcg gcgctggcag aaggcgcagg gcatcgcccc ggactggctg gaccgctcgt
     8341 agcgtcgagc ttgctcgact gcttctgtgc ttcgcttcct gcttcggggg gagggcggcc
     8401 ttcgctcttt gctcttggta gaggtcgagc ttgctcgacc gcctttgacc ttcgcgaaca
     8461 gcagtcgagc aagctcgaca tctaccaggg caacggcaac agcagtcctt cgcgcttcgt
     8521 ttcctgctct ct
//
LOCUS       DAOKIP010000173         8513 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.173,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000173 DAOKIP010000000
VERSION     DAOKIP010000173.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 8513)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8513)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8513
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.173"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..244)
                     /locus_tag="QEL58_003158"
     CDS             complement(<1..244)
                     /locus_tag="QEL58_003158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017908994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GlsB/YeaQ/YmgE family stress response membrane
                     protein"
                     /protein_id="HDS1677597.1"
                     /translation="MGIIIWLIVGGIVGWLASIIMKRDAQQGIILNIVVGIVGALISG
                     WLFGGGINEAITIRTFLFSLIGAVILLAIVNLFTRKS"
     gene            329..928
                     /locus_tag="QEL58_003159"
     CDS             329..928
                     /locus_tag="QEL58_003159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019338310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4'-phosphopantetheinyl transferase superfamily
                     protein"
                     /protein_id="HDS1677598.1"
                     /translation="MSLPATLDGPWRFGPVTVWRRTHVPGHRGEPQARQVLAQALGAE
                     PEALPLVRDGKGRPELTGALAHYGTGWSHSGEVLLVALGEGVRLGVDLELLRPRPRLL
                     EIVRRFFHPEEVAWLESLDEAGREHWFFRVWCAKEAMLKAHGQGISFGLHRLQLAPGN
                     DGALHLRWCDPELGEAARWRLHEWQASGQFRAALAWYPH"
     gene            968..1606
                     /gene="rsmG"
                     /locus_tag="QEL58_003160"
     CDS             968..1606
                     /gene="rsmG"
                     /locus_tag="QEL58_003160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005420388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(527)-N(7))-methyltransferase
                     RsmG"
                     /protein_id="HDS1677599.1"
                     /translation="MSEHPLPASVTATLEQGLASMGLDAALAPPLLRYLALLHRWNGT
                     YNLTAIRDPQEMVTRHLLDSLAMQPFVADGSLADLGTGPGLPGIPLAIACPGLQVTLV
                     ESNGKKARFMREAVRQLGLGNARVAESRAEALDEAGRYDQLTARAMDTLAGIVRVGGH
                     LLRPGGVLLAMKGVYPHEEIADLPEGWQVREVTPLSVPGLAGERHLVTVAGP"
     gene            1720..2517
                     /locus_tag="QEL58_003161"
     CDS             1720..2517
                     /locus_tag="QEL58_003161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005914407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HDS1677600.1"
                     /translation="MARIIAIANQKGGVGKTTTAVNLAASLANAPKRVLLVDLDSQGN
                     ATMGSGVDKRELAASTCDLLLGENSAADVRVQAAEGYDLLPGNIDLTAAEIQLMGESE
                     REQRLKRALAPIRDEYDYILIDCPPALSLLTLNALAAADSVIVPMQCEYYALEGLSAL
                     VETIEALRTSLNPALEIEGVLRTMFDVRNNLANAVSAELTEHFGDRVFRTIVPRNVRL
                     AEAPSHGQSIVGYDRASRGGVAYLGLAGEIIRRNNERNKAAKAVETV"
     gene            2517..3440
                     /locus_tag="QEL58_003162"
     CDS             2517..3440
                     /locus_tag="QEL58_003162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005411652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB/RepB/Spo0J family partition protein"
                     /protein_id="HDS1677601.1"
                     /translation="MTSSKPAAKKRGLGRGLDALLGPKGAVSQVQATTAVIEPLPGEV
                     LRKLAVGQLQPGKYQPRREMDEGKLSELADSIKSQGVIQPILVRQLPAGNYEIVAGER
                     RWRASQLAGLDEVPVVVRELEDRTVIAMALIENIQREDLNPLEEAEALQRLISEFTLT
                     HAEAAEAVGRSRAAVSNLLRLLELPVAIRLLLETRRLEMGHARALLTLAPELAGKLAQ
                     EAADEGWSVREVERRAQAFAAGKVPSNRPVATPKVQQADIASLETELSEALGAKVAIN
                     HGRGGKGKLIIHYTDLDTLDGVLEKLRTRQG"
     gene            3567..4298
                     /locus_tag="QEL58_003163"
     CDS             3567..4298
                     /locus_tag="QEL58_003163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010482380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="suppressor of fused domain protein"
                     /protein_id="HDS1677602.1"
                     /translation="MSNAFDDVSPGGSPIMVHSRQKDFTPAQGEEHIEAISAHIERHL
                     GPVSGVFHEIISDLVHIDVHVVPANEQFPYLRLVTSGMSDLPMTVPAEVDADVPCYME
                     LMVTLPADWPISQDAFEDERNYWPVRLLKGMARLPHEYDTWLGFGHTIPNGHPSEPYA
                     PGVGFDGAIVLPPVTTPEDFAELVLEDGKTIAFMALMPLYPEEMDLKLKKGAEALLDR
                     FDAKNIQDVIEPGRSNVAKKRFGLF"
     gene            4350..5315
                     /locus_tag="QEL58_003164"
     CDS             4350..5315
                     /locus_tag="QEL58_003164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017169566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HDS1677603.1"
                     /translation="MTLLLTGAAGFIGAYTARALLEAGQPVVGLDNFNDYYDPQIKRD
                     RVAALCPTLDLRTLDLTDRDGLAALFDEVQPTAVIHLAAQAGVRYSLENPHAYVDSNL
                     VGFVNMLELCRHRGVQHLVYASSSSVYGDSATPPFSEDQRVDQPRSLYAATKAANELM
                     AYTYAQLYGLRATGLRFFTVYGPWGRPDMAPLLFSRAVLAGRPIDVFNEGRMQRDFTH
                     VSDIVSGILGALAHPADGPVPHRVFNLGNHTPVELERFIGVIEQAAGRPAQKVYKPMQ
                     PGDMVRTMADTRRAHDAFGFDAVTPIEEGLPPVVQWCREYFGDRA"
     gene            5405..6127
                     /locus_tag="QEL58_003165"
     CDS             5405..6127
                     /locus_tag="QEL58_003165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011038929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HDS1677604.1"
                     /translation="MSQPELSVVVPVFNERDNVAPLVAEITAALRGRLPFEIVYIDDH
                     SRDDTLAVLQGLKATTPELRVLHHVNQSGQSTAVRTGVKHARAPWIATLDGDGQNDPA
                     DIPKLLAARDAAEAQVKLFAGWRVNRQDSGSKRWASRWANAIRARMLRDDTPDTGCGI
                     KLFERSAFLDLPYFDHMHRYLPALMQRAGWKTTSVPVNHRHRTAGVSKYNNLGRALVG
                     IRDLRGVAWLITRSKRTAVEER"
     gene            6127..6474
                     /locus_tag="QEL58_003166"
     CDS             6127..6474
                     /locus_tag="QEL58_003166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid-A-disaccharide synthase N-terminal
                     domain-containing protein"
                     /protein_id="HDS1677605.1"
                     /translation="MGLALHWLDQPLTWLYWTGLHVTGWKLIGYTGALMFGGRWLVQF
                     IASKRAGKPVIPRLFWYMSVVGSLMTLSYFLFSAKQDSVGVLQNLFPAFTALYSLQLD
                     IKHRGWKRDRASH"
     gene            6737..8509
                     /locus_tag="QEL58_003167"
     CDS             6737..8509
                     /locus_tag="QEL58_003167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005411647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF885 family protein"
                     /protein_id="HDS1677606.1"
                     /translation="MKTRLAVALLIALSAPAVALAAPPATAAPASVATESPADAAFRA
                     VYEKEWKWRQDGGGEASEDEDAPANATRMPDVGPAAQQARLKVWDETLTALKKIDPKT
                     LSADNQVNYAIYRDQVFNLAEEVRLRGYEMPFNADSSFWSNLSFMARREMKTVQDYQN
                     YIARLNDVPRYFGQQTENMRAGLKRGFSVPRAVLDGREVSIATVAELKDPTESPLYAP
                     FKKLPNSIPAAEQARLQAQAREAISAKVVPAFQQLRTFFVSEYVPQARTTLAAEAMPD
                     GKAYYKQQIHEYTTLDLSPDEIHRIGLGEVERIQGEMNDIIKQVKFKGSFAEFLTFLR
                     TDPQFYAKTPEELLSRAAWISKRADGQLGKYMTLPRARFTIVPVPPDIAPFWTAGRGG
                     MGTYWLNTYNLPSRPLYNLPALTLHESDPGHALQGAIAAEQKNLPEFRRNAYISAYGE
                     GWALYCEKLGVEMGIYETPYEDFGRLTYEMWRAARLVIDTGVHSKGWTREQALAYLRD
                     HTALSEHEVTTEVDRYISWPGQALSYKLGEIAIVRLRAQAEKELGDKFDIKGFHDTLL
                     KQGSVPLPVLEQQIQAYIAERKKA"
BASE COUNT         1460 a         2938 c         2834 g         1281 t
ORIGIN      
        1 tgctcttgcg ggtgaacagg ttgacgatcg ccagcaggat caccgcaccg atcagcgaga
       61 acaggaaggt gcggatggtg atcgcttcgt tgatgccgcc gccgaacagc cagccggaaa
      121 tcagcgcgcc gacgatgccg accacgatgt tgaggatgat gccctgctgg gcgtcgcgct
      181 tcatgatgat gctggccagc cagcctacga tgccgccgac gatcagccag atgatgatgc
      241 ccatgatcga acctccggtg gggaactgtg accagttgac gcgcatggct gtgaacccgt
      301 cgtgcaattg cgtgatgggc gcgtgcggat gagcctgcca gccaccctcg acggcccgtg
      361 gcgcttcggc ccggtgacgg tctggcggcg cacccacgtg cccggccacc gcggtgaacc
      421 gcaggcgcgg caggtgctgg cgcaggcgct gggcgccgaa ccggaggcgc tgccgctggt
      481 gcgcgacggc aaggggcggc ctgaactgac cggcgcactg gcccattacg gaaccggctg
      541 gagccacagc ggcgaggtgc tgctggtggc gctgggcgag ggcgtgcggc tgggcgtgga
      601 ccttgagctg ctgcggccgc gaccacgcct gctggagatc gtgcggcgct tcttccaccc
      661 cgaggaagtg gcctggctgg aaagcctgga cgaggccggg cgcgagcact ggttcttccg
      721 cgtgtggtgc gccaaggaag cgatgctgaa agcccacggc caaggcatct cgttcggcct
      781 gcaccggctg cagctggccc ccggcaatga cggcgccctg cacctgcgct ggtgcgaccc
      841 ggaactgggt gaggccgcgc gctggcgcct gcacgaatgg caggccagcg ggcagttccg
      901 cgcggcattg gcctggtatc cgcactgaag cggggaatca gcgcgcaaaa ccggcgataa
      961 tgccggcatg agcgaacacc cacttcccgc cagcgtgact gccacgctgg aacagggcct
     1021 ggccagcatg ggcctggatg ccgcgctggc accgccgctg ctgcgctacc tggccctgct
     1081 gcaccgctgg aacggcacct acaacctcac cgccatccgc gacccgcagg agatggtcac
     1141 ccgtcatctg ctcgactcgc tggcaatgca gccgttcgtg gccgatggca gcctggccga
     1201 cctcggcacc ggccccgggc tgcccggcat cccgctggcc atcgcctgcc cgggcctgca
     1261 ggtcaccctg gtcgagagca acggcaagaa ggcacgcttc atgcgagagg cggtgcgcca
     1321 gctgggcctg ggcaatgccc gtgtggccga gtcgcgcgcc gaggcgctgg atgaggccgg
     1381 ccgctacgac cagctgaccg cgcgcgcgat ggacaccctt gccggcatcg tccgcgtcgg
     1441 tggtcacctg ctgcgccccg gtggcgtgtt gctggccatg aaaggcgtct acccgcatga
     1501 agagatcgcg gacctgccgg aaggctggca ggtgcgtgag gtgaccccgc tgagcgtgcc
     1561 cggcctggcc ggcgaacgcc acctggtcac ggttgcaggc ccctgattgc cgccgccagc
     1621 cctttgtgga acaacgggtt ggcgattcac gatttccgcc cggggccggt tgtacgcata
     1681 atgaccggtc ccaaccatcc gtcgacgagg cacacccgca tggcccgcat catcgccatc
     1741 gccaaccaga agggtggcgt cggcaagacc acgaccgccg tcaacctggc cgcttccctg
     1801 gccaacgcac ccaagcgcgt gctgctggtc gatctggact cgcagggcaa cgcgaccatg
     1861 ggcagtggcg tggacaagcg cgagctggcc gcctccacct gcgatctgct gcttggcgag
     1921 aacagtgctg ccgacgtgcg cgtgcaggcc gccgagggct acgacctgct gcccggcaac
     1981 atcgacctga ccgccgccga gatccagttg atgggtgaga gcgagcgcga gcagcgcctg
     2041 aagcgcgcgc tggcgccgat ccgcgacgag tacgactaca tcctgatcga ctgcccgccg
     2101 gcgctgtcgc tgctgacgct caacgcgctg gccgccgccg attcggtgat cgtgccgatg
     2161 cagtgcgagt actacgcgct ggaaggcctg agcgcgctgg tggagaccat cgaagcgctg
     2221 cgtaccagcc tgaacccggc gctggagatc gaaggcgtgc tgcgcaccat gttcgatgtg
     2281 cgcaacaacc tggccaacgc ggtctcggcc gagctcaccg agcacttcgg cgaccgcgtg
     2341 ttccgcacca tcgtgccgcg caacgtgcgc ctggccgagg cgcccagcca tggccagagc
     2401 atcgtcggct acgaccgcgc ctcgcgcggt ggcgtggcct acctgggcct ggccggcgag
     2461 atcatccgcc gcaacaacga acgcaacaag gccgccaagg ccgtggagac cgtctgatga
     2521 ccagcagcaa gccggcagcc aagaagcgag gcctcggccg tggcctggat gcgctgctcg
     2581 gtcccaaggg cgcggtcagc caggtgcagg ccaccaccgc ggtgatcgag ccgctgccgg
     2641 gcgaagtgct gcgcaagctg gccgtcggcc agctgcagcc gggcaagtac cagccgcgcc
     2701 gcgagatgga cgagggcaag ctgtccgagc tggccgattc gatcaagtcg cagggcgtga
     2761 tccagccgat cctggtgcgc cagctgccgg cgggcaacta cgaaatcgtc gccggtgaac
     2821 gccgctggcg cgcctcgcag ctggccggcc tggacgaagt gccggtggtg gtgcgcgagc
     2881 tggaagaccg caccgtcatc gcgatggcgc tgatcgagaa catccagcgt gaagacctca
     2941 atccgctgga agaagccgaa gcgctgcaac gcctcatcag cgaattcacc ctgacccatg
     3001 ccgaggccgc cgaggccgtc ggccgctcgc gcgcggcggt gtccaacctg ctgcgcctgc
     3061 tggagctgcc ggtggcgatc cggctgctgc tggaaacccg ccgcctggaa atgggccatg
     3121 cccgcgcgct gctgaccctg gcccccgagc tggccggcaa gctggcgcag gaagcggccg
     3181 acgaaggctg gtcggtgcgc gaggtcgagc gccgtgcgca ggccttcgcc gctggcaagg
     3241 tgccgagcaa ccgcccggtg gccacgccga aggtgcagca ggccgacatc gcctcgctgg
     3301 aaaccgagct gtccgaagcg ctgggtgcca aggtggcgat caaccacggc cgcggcggca
     3361 agggcaagct gatcatccat tacaccgatc tggacaccct ggacggcgtg ctggaaaagc
     3421 tgcgtacgcg ccagggctga gcccggcgca gcaacggggg acgcggcccg ttcctgccgt
     3481 ttcccgtgaa tgacagggaa cgcaccgccg cgcgcgccgg ggcctgcact gtgctctggc
     3541 ccgtggcctc atccagggag caggacatga gcaacgcatt cgacgacgtc agcccgggcg
     3601 gcagcccgat catggtgcac agccgccaga aggacttcac gccggcgcag ggcgaagaac
     3661 acatcgaggc gatcagcgcg cacatcgagc gccatctggg cccggtgtcc ggcgtcttcc
     3721 acgagatcat ctccgacctg gtgcacatcg acgtgcacgt ggtgccggcc aatgagcagt
     3781 tcccgtacct gcggctggtg acctccggca tgagcgacct gccgatgacc gtgcccgccg
     3841 aggtggacgc ggacgtgccg tgctacatgg agctgatggt gaccctgccg gccgactggc
     3901 cgatctcgca ggacgccttc gaggacgagc gcaactactg gccggtgcgc ctgctgaagg
     3961 gaatggcgcg gctgccgcac gagtacgaca cctggctggg cttcggccac accatcccca
     4021 acggccaccc cagcgagccc tatgcgccgg gcgtgggttt cgacggtgcc atcgtgctgc
     4081 cgccggtgac caccccggaa gacttcgccg aactggtgct cgaggacggc aagaccatcg
     4141 ctttcatggc cctcatgccg ctgtacccgg aagagatgga cctgaagctg aaaaagggcg
     4201 ccgaagcact gctcgaccgc ttcgatgcga agaacatcca ggacgtgatc gaacccggcc
     4261 gcagcaatgt ggccaagaag cgtttcgggc tgttctgagc ccgcagcgta tcctctgcac
     4321 ctgtactcat tgatttccag gcaactgcaa tgaccctcct gctcaccggc gctgccggct
     4381 tcatcggtgc ctacaccgcc cgcgcgctgc tggaggctgg ccagccggtg gtcggcctgg
     4441 acaacttcaa cgactactac gacccgcaga tcaagcgcga ccgcgtggcc gcgctgtgcc
     4501 cgacgctgga cctgcgcacg ctggacctga ccgaccgcga tggcctggcc gcgctgttcg
     4561 acgaggtgca gccgaccgcg gtgatccacc tggccgcgca ggccggcgtg cgctattcgc
     4621 tggaaaaccc gcacgcctac gtagacagca acctggtcgg cttcgtcaac atgctcgaac
     4681 tgtgccgcca ccgtggcgtg cagcacctgg tgtatgcgtc gagcagctcg gtctatggcg
     4741 actcggccac gccgccgttc tccgaagacc agcgcgtgga ccagccacgc tcgctgtacg
     4801 cggcaaccaa ggccgccaac gagctgatgg cctacaccta cgcgcagttg tacggcctgc
     4861 gcgccaccgg cctgcgcttc ttcaccgtgt atggcccgtg gggccggcct gacatggcac
     4921 cgctgctgtt ctcgcgcgcg gtgctggccg gtcggccgat cgacgtgttc aacgaaggcc
     4981 gcatgcagcg cgatttcaca catgtctccg acatcgtgtc cggtatcctt ggcgccctcg
     5041 cgcatccggc cgacggtccg gtgccgcacc gggtgttcaa cctcggcaac catacgccgg
     5101 tcgagctgga gcgcttcatc ggcgtgatcg agcaggctgc cggccgcccc gcgcagaagg
     5161 tctacaagcc catgcagccc ggcgacatgg tgcgcacgat ggccgacacc cggcgtgcac
     5221 atgacgcctt cggcttcgac gcggtgaccc cgatcgaaga gggattgccg cccgtcgtgc
     5281 agtggtgccg cgagtatttt ggcgaccgcg cctgagccgt gatcctcacg cggccaggtt
     5341 catcttcgga taacctcggt ttcggagaat gcgcggtctt tgtcccccct tggccgagtc
     5401 cctcatgagc caacccgagc tttccgttgt cgtccccgtg ttcaacgagc gcgacaacgt
     5461 cgccccgctg gtcgccgaaa tcaccgctgc cctgcgtggc cggttgccgt tcgagatcgt
     5521 ctacatcgac gatcactcgc gcgatgacac cctggccgtg ctgcaggggc tgaaggccac
     5581 cacgccggaa ctgcgcgtgc tgcaccatgt gaaccagagc gggcagagca ccgcggtgcg
     5641 caccggcgtc aagcatgcgc gggcgccctg gatcgccacc ctggatggcg atggccagaa
     5701 tgatccggcc gacattccca agctgctggc cgcgcgcgat gcggccgagg cgcaggtgaa
     5761 gctgtttgcc ggctggcgcg tcaaccgcca ggacagcggc agcaagcgct gggccagccg
     5821 ctgggccaat gcgatccgcg cgcgcatgct gcgcgatgac acgcccgaca ccggctgcgg
     5881 catcaagctg ttcgagcgca gcgccttcct cgacctgccg tacttcgacc acatgcaccg
     5941 ctacctgccg gcgctgatgc agcgtgctgg ctggaagacc accagcgtgc cggtcaacca
     6001 ccgccaccgt accgccggcg tgtccaagta caacaacctg ggccgcgcgc tggtcggcat
     6061 ccgcgacctg cgcggcgtgg cctggctgat cacccgcagc aagcgcaccg cggtggaaga
     6121 gcggtgatgg gcctggcact gcactggctc gaccagccgc tgacctggct gtactggacc
     6181 ggcctgcacg tgaccggctg gaagctgatc ggctataccg gcgcgctgat gttcggcggc
     6241 cgctggctgg tccagttcat cgcctccaag cgcgccggca agccggtcat cccgcgcctg
     6301 ttctggtaca tgagcgtggt cggcagcctg atgacgctga gctacttcct gttctcggcc
     6361 aagcaggact cggtgggcgt gctgcagaac ctgttcccgg cgttcaccgc gctgtacagc
     6421 ctgcagctgg acatcaagca ccggggctgg aagcgggaca gggccagcca ctgaggctgc
     6481 cggggctccc atccggtagg tgccgatctt ggtcggcaca tgtgtatccg gacccgggat
     6541 atccacgcat ggcgtggatc tactgcatgt tcggcggcct tgccgggtag ctgccaacct
     6601 tggttggcac acggggaaag ccagcgccga ccaaggtcgg cagctaccgg gcacggccca
     6661 ggcaggacct tcgtcccatg ccaccggcgg tgggcggtgc catgatcggg gtctgccttc
     6721 ccgggaacct gtgctcgtga aaacccgtct tgccgttgcc ctgctgattg ccctgtccgc
     6781 ccccgccgtg gccctggccg cgccgcccgc caccgctgca ccggccagcg tggccaccga
     6841 atcgcccgcc gacgccgcct tccgtgcggt gtacgagaag gaatggaagt ggcgccagga
     6901 cggcggcggt gaggccagtg aggacgaaga tgccccggcc aatgccaccc gcatgcccga
     6961 cgtcggcccg gccgcacagc aggcacgcct gaaggtgtgg gacgagaccc tgaccgcgct
     7021 gaagaagatc gacccgaaga ccctgtcggc cgacaaccag gtcaactacg cgatctaccg
     7081 cgaccaggtg ttcaacctgg ccgaagaggt gcgcctgcgc ggctacgaga tgccgttcaa
     7141 cgccgactcc tcgttctggt cgaacctgtc cttcatggcc cggcgcgaga tgaagaccgt
     7201 gcaggactac cagaactaca tcgcacgcct gaatgacgtg ccgcgctact tcggccagca
     7261 gaccgagaac atgcgcgccg gcctgaagcg cggtttcagc gtgccgcgtg ccgtgctcga
     7321 cggccgcgag gtctccatcg ccaccgttgc cgaactgaag gacccgaccg aatcgccgct
     7381 gtacgcgccg ttcaagaagc tgcccaacag cattccggcc gccgagcagg ccaggctgca
     7441 ggcgcaggcg cgcgaagcga tcagtgccaa ggtagtgccg gcgttccagc agctgcgcac
     7501 cttcttcgtc agcgagtacg tgccgcaggc gcgcaccacc ctggccgccg aagcgatgcc
     7561 ggacggcaag gcgtactaca agcagcagat ccacgaatac accacgctgg acctgtcgcc
     7621 ggacgagatc caccgcatcg gcctgggtga agtcgagcgc atccagggcg agatgaatga
     7681 catcatcaag caggtgaagt tcaagggcag cttcgccgag ttcctgacct tcctgcgtac
     7741 cgatccgcag ttctacgcca agaccccgga agagctgctg tcgcgcgcgg cgtggatctc
     7801 caagcgggca gacggccagc tgggcaagta catgacgctg ccgcgcgcgc gcttcaccat
     7861 cgtgccggtg ccgccggata tcgcaccgtt ctggaccgcc ggccgtggtg gcatgggcac
     7921 ctactggctc aacacctaca acctgccatc gcgcccgctg tacaacctgc cggcgctgac
     7981 cctgcatgag tccgatccgg gccacgcgct gcagggcgcc atcgccgccg agcagaagaa
     8041 cctgcccgag ttccgccgca acgcctacat ctccgcctat ggcgaaggct gggcgctgta
     8101 ctgcgagaag ttgggcgtgg agatgggcat ctacgaaacc ccgtacgagg atttcggccg
     8161 cctgacctac gaaatgtggc gcgccgcgcg cctggtcatc gacaccggcg tgcacagcaa
     8221 gggctggacc cgcgagcagg cactggccta cctgcgtgac cacaccgcgc tgagcgagca
     8281 tgaagtgacc accgaagtgg accgctacat ctcctggcct ggccaggcgc tgagctacaa
     8341 gctgggcgag atcgccatcg tgcgcctgcg cgcgcaggcc gagaaggagc tgggcgacaa
     8401 gttcgacatc aagggcttcc acgacaccct gctcaagcag ggctcggtgc cgctgccggt
     8461 gctggaacag cagatccagg cctacatcgc cgaacgcaag aaggcctgac cgc
//
LOCUS       DAOKIP010000174         8505 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.174,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000174 DAOKIP010000000
VERSION     DAOKIP010000174.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 8505)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8505)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8505
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.174"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            175..1833
                     /gene="lldP"
                     /locus_tag="QEL58_003168"
     CDS             175..1833
                     /gene="lldP"
                     /locus_tag="QEL58_003168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001055309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate permease"
                     /protein_id="HDS1677607.1"
                     /translation="MQPWQHLYDPAGNLWLSSLIALLPIAFFFIALAMLRMKGWLAGT
                     ITVAIALGVALLFYRMPLTQALGAAGFGFVYGLWPIAWIIIGAVFLYKVSVKTGQFDI
                     IRASILSVTEDQRLQMLMVGFAFGAFLEGAAGFGAPVAITAALLVGLGFKPLYAAGLC
                     LIVNTAPVAFGAMGIPIIVAGQVTGLDAFEIGQMAGRQLPFLTIIVLFWIMAIMDGWR
                     GIRETWPAVLVAGGSFAIAQYLTSNFIGPELPDITASLASLVCLTLFLRRWKPVRIFR
                     FDTETSAEAAAQALEAPRYSVGQIAKAWSPFLILTAMVTLWSIKPFKSLFAAGGPLEH
                     WVLKIPVPGLDQMVQKMPPIVDAPLSYEAIYKFDWFSATGTSIILAAVIAIIALRMPV
                     RSALQTFGETVRELRMPIYSIGMVLAFAFIANYSGLSATLALALAHTGDAFPFFSPFL
                     GWLGVFLTGSDTSSNALFSALQATTAQQIGVSDVLLVAANTTGGVTGKMISPQSIAIA
                     CAAVGLAGKESDLFRFTVKHSLIFTTMVGLITLAQAYWLTWMIP"
     gene            1887..2659
                     /gene="lldR"
                     /locus_tag="QEL58_003169"
                     /pseudo
     CDS             1887..2659
                     /gene="lldR"
                     /locus_tag="QEL58_003169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037558.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator LldR"
     gene            2664..3803
                     /gene="lldD"
                     /locus_tag="QEL58_003170"
     CDS             2664..3803
                     /gene="lldD"
                     /locus_tag="QEL58_003170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FMN-dependent L-lactate dehydrogenase LldD"
                     /protein_id="HDS1677608.1"
                     /translation="MIISASTDYRAAAERRLPPFLFHYIDGGAYAEHTLKRNVSDLSD
                     IALRQRILRNMSDLSLETELFGEKLAMPVALAPVGLTGMYARRGEVQAARAADSRGIP
                     FTLSTVSVCPIEEVAPAIQRPMWFQLYVLRDRGFMRNALERAQAAGVTTLVFTVDMPV
                     PGARYRDAHSGMSGPNASLRRIGQAITHPHWAWDVGLFGRPHDLGNISTYRGNPTGLE
                     DYIGWLGSNFDPSISWKDLEWIREFWKGPMVIKGILDPDDARDAVKFGADGIVVSNHG
                     GRQLDGVLSTARALPAIADAVQGDLKILADSGIRTGLDVVRMLALGADTVLLGRAFVY
                     ALAAQGEAGVANLLDLIAKEMRVAMTLTGARSIADIGRDSLVSLP"
     gene            3800..5500
                     /gene="dld"
                     /locus_tag="QEL58_003171"
     CDS             3800..5500
                     /gene="dld"
                     /locus_tag="QEL58_003171"
                     /EC_number="1.1.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-lactate dehydrogenase"
                     /protein_id="HDS1677609.1"
                     /translation="MSGHDAVLVQLRDAVGSRHVLTGDKATRRFRRGYRFGDGPVLAV
                     VRPGTLLELWHVLQAAVQGGAAIILQAANTGLTGGSTPDGNDYGRPIVLVSTLRLTGI
                     QLLNGGRQVLCLPGATLDRLEQTLAPLGREPHSVIGSSCIGASVLGGICNNSGGALVR
                     RGPAYTELALYAQVDAQGQLQLVNHLGIALGDTPEQILQRLQAGDYTAADVGDGDGRA
                     ASDPRYAEEVRRVDADTPARFNADPSRHFEAAGSAGKLAVFAVRLDTFEKEAAEVFYI
                     GSNRTDSLSAIRRQLLTGFERLPIAGEYIHRDAYDIGERYGKDSFLLIDRLGTARVPA
                     AFALKSRVDGWFERLGLRGVTDRVMQVLTGLLPSHLPKRMGEFRQRYEHHLLLKVSAQ
                     DAAQTGAWLRDFFAGHEGGYFHCTAEEGRKAFLHRFAVAGAAVRYREVHREKVQDIVA
                     LDIALRRDDADWFEQLPADIDNRLLHKLYYGHFLCHVFHQDYIARRGEDPMAIEHAMW
                     ALLDQRGAEYPAEHNVGHLYPAKPALAGFYRQLDPSNTFNPGIGQTSKAKGWGGCDCG
                     "
     gene            5626..6501
                     /locus_tag="QEL58_003172"
     CDS             5626..6501
                     /locus_tag="QEL58_003172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677610.1"
                     /translation="MPITGARTFLCAALLATPLLALAQGSILPQQRDAAGNVMEPLGQ
                     VLDAAGVRHCTADGAWCVRVQPVAHDGDRPTTLEVSERGTAEGDSHVYHVSIDVPQES
                     ELKLWPWIVRLASGVGSDAVVTDPQQRARQNVLVGGIVSFTFSSMYSGGGADASTLQL
                     ARVRHLQDDIQVDDDVLTVPWQGNASIRACFSEQDARQRAGACHDEYSFSAKLGLDPV
                     AQAMPVLRYQTVATRFPAGASRFEDSLAKGPLKKKDLRTEQDPACSYTRLFRFSEGMF
                     HPDQALPDCAGYTEP"
     gene            complement(6552..6848)
                     /locus_tag="QEL58_003173"
     CDS             complement(6552..6848)
                     /locus_tag="QEL58_003173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010485066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677611.1"
                     /translation="MSITRLAVAALAAPLLLSACVSTPGPEVKGTGRCDASQLGWAVG
                     QPGNEENLRRLSRESGAGLVNPIGPTTITTKDIRQDRLRVYMDKDNIITAARCE"
     gene            complement(6943..7620)
                     /locus_tag="QEL58_003174"
     CDS             complement(6943..7620)
                     /locus_tag="QEL58_003174"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677612.1"
                     /translation="MSTDARRIRRPGQCLLIAFMLTMGGCGGSAPNATFETSPALSDA
                     DLKGLYPGTLLRQVVFEDIDGAGLLLISRSEQTSPAQEDKEPLDQITLRAELFRRPGL
                     AAPWTSRWLQEDPVQCEDLDLDAGYFLDQVTATDLDNDGRAELTLASHSFCGGGVDPQ
                     QLRIGLRQGEQYYEVRGESLVQVEGDEPFGGDRQDDPALASAAPALRAHVDKVWEAIK
                     RGQPGPP"
     gene            complement(7617..8195)
                     /locus_tag="QEL58_003175"
     CDS             complement(7617..8195)
                     /locus_tag="QEL58_003175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677613.1"
                     /translation="MSYAHTMKQLSNRLTALLALSCLWAPACSSMPKDNELSVRSPRG
                     ITVTADGPIARNYPQTKCLDFRRKHKSIGFLCFSSSEQFITDFGIAATASPDAQGHLQ
                     VTSGMSTHELKPIIINGRTLFTAEVDCDDRDAPLYRATSTCHVAFMPVANAHFFYSNF
                     ILSNEATSTSGVDERTVMDIWKSLASASGGHG"
BASE COUNT         1394 a         2747 c         2799 g         1565 t
ORIGIN      
        1 ggtcggacca atagggcgcc tagccctatg gtctaatagg cgcttcgccg gagtgacggt
       61 taaatccgcc ctaagtggct cgataatttt acttattggt aataccaata agtatcggcc
      121 acggcgaccc accgcctgcg gtggagcaca tcccgccccc agtcgagagc cttcatgcag
      181 ccctggcaac acctgtacga ccccgccggc aacctgtggt tgtccagcct gatcgcgctg
      241 ctgccgatcg cgttcttctt catcgccctg gccatgctgc gcatgaaggg ctggctcgcc
      301 ggcacgatca ccgtggccat cgcgctgggc gtggcgctgc tgttctatcg catgccgctg
      361 acccaggcgt tgggcgcagc cggcttcggc ttcgtttacg gcctgtggcc tatcgcctgg
      421 atcatcatcg gcgcggtgtt cctgtacaaa gtctcggtca agaccgggca gttcgacatc
      481 atccgtgcct cgatcctgtc ggtcaccgag gaccagcgcc tgcagatgct gatggtcggc
      541 ttcgccttcg gtgccttcct ggaaggtgcg gccggcttcg gcgcgccggt ggcgatcacc
      601 gcggcgctgc tggtcgggct gggcttcaag ccgctgtatg ccgccggcct gtgcctgatc
      661 gtcaacaccg cgccggtcgc ctttggtgca atgggcattc cgatcatcgt ggccgggcag
      721 gtcaccggcc tggatgcgtt cgagatcggc cagatggctg ggcgccagct gcccttcctt
      781 accatcatcg tgctgttctg gatcatggcg atcatggatg gctggcgcgg catcagggaa
      841 acctggcccg cggtgctggt ggccgggggc tcgttcgcca tcgcgcagta cctgacctcc
      901 aacttcattg gcccggaact gccggacatc accgcctcgc tggcatcgct ggtgtgcctg
      961 accctgttcc tgcgtcgctg gaagccggtg cggatcttcc gcttcgatac cgaaaccagc
     1021 gccgaggcgg ccgcacaggc gctggaggca ccgcgctaca gcgtcggcca gatcgccaaa
     1081 gcctggtcgc cgttcctgat cctcaccgcg atggttacgc tgtggagcat caagccgttc
     1141 aagtcgctgt tcgcggcggg cggcccgctg gagcactggg tgctgaagat cccggtgccg
     1201 ggcctggacc agatggtgca gaagatgccg ccgatcgtgg acgcgccgct cagctacgag
     1261 gcgatctaca agttcgactg gttctcggcc accggtacct cgatcatcct cgctgcggtg
     1321 atcgccatca tcgcgctgcg catgccggtc cgttcggcgc tgcagacctt cggtgagacg
     1381 gtgcgcgagc tgcgcatgcc gatctactcg attggcatgg tgctggcctt cgccttcatc
     1441 gccaactact cgggcctgtc ggccacgctt gccctggcac tggcacacac cggtgatgcg
     1501 ttcccgttct tctcgccgtt ccttggctgg ctgggggtgt tcctgaccgg ctcggacact
     1561 tcgtccaatg ccttgttctc ggcactgcag gccaccaccg cacagcagat cggcgtgtcc
     1621 gacgtgctgc tggtggcggc caacaccacc ggtggcgtca ccggcaagat gatctcgccg
     1681 cagtcgattg ccattgcctg cgccgcggtg gggctggccg gcaaggaatc ggacctgttc
     1741 cgcttcaccg tcaagcacag tctgatcttc accacgatgg tcggcctgat caccctggcc
     1801 caggcctact ggctgacctg gatgattccc tgagccatgc acggtcggcc gaccacccgc
     1861 tgcgcgcttc gggccacaat ggcgccatga gcacgcaacg tatttcggac aaggtggctg
     1921 cgcagctgcg cagctgcgcg gcctggtgca ggaacagcgg ctgcagccgg gtgaccggct
     1981 gccggccgag cgcaccctgg cggtgcagct gggggtctcg cgtactgcat tgcgcgaggc
     2041 gatcgcacag ttggccagcc agggcctgtt gacggcgcgg gtcggtggcg gcacctatgt
     2101 ggccgaaccg gcggcgcgcg cgcggcaggc actggatgaa ccgctggcgc cgtacctgcc
     2161 gctgttccag ggcgacccgg aataccgctt cgacgtgctg gagatccgcc acgcactgga
     2221 aggcgccacc gcctggcacg ccgcgctgcg cgccactgac gaggaccgca cccgcatcgc
     2281 gcaggcgttc cagaccatga tggatgcgca cggcaaagac gatcccaccg gcgaggccga
     2341 ggccgatgcg gccttccacc tgtccatcgc cgaggcgtcg cacaacctgg tgctgctgca
     2401 ggtgatgcgc ggcctgttcg aactgctgca gaccaatatc tcgcagagcc gcgagaagct
     2461 ctacacctcg gcgagaacct tctcgccact gtccgaccag caccgcgaga tgatggacgc
     2521 ggtgctggcc ggcgaccccg aacgcgcgcg cgccgccgcg catgcccacc tcgagttcgt
     2581 gcacaccacg ctgcgcaccc tcgatgacaa cgaagcccgg cgtgcgcggg cctcgcgtct
     2641 accttcccca cacggttgac cccatgatca tctccgcctc caccgattac cgtgctgcag
     2701 ccgaacgccg gctgccgccg ttcctgttcc actacatcga tggcggtgcg tatgccgagc
     2761 acacgctgaa gcgcaacgtt tccgacctgt ccgacatcgc gctgcgccag cgcatactgc
     2821 gcaacatgtc cgacctgagc ctggaaaccg aactgttcgg cgaaaaactg gcgatgccgg
     2881 tggcgctggc gccggtcggc ctgaccggca tgtatgcccg gcgcggtgaa gtgcaggcgg
     2941 cgcgcgcggc cgacagccgc ggcatcccgt tcaccctgtc cactgtctcg gtgtgcccga
     3001 tcgaagaagt ggcgccggcg atccagcggc cgatgtggtt ccagctgtat gtgctgcgcg
     3061 accgtggctt catgcgcaac gcgctggagc gcgcgcaggc cgcgggcgtg accacgctgg
     3121 tgttcaccgt ggacatgccg gtgccgggcg cgcgctatcg tgacgcgcac tccggcatga
     3181 gcgggccgaa cgcctcgctg cgccgtatcg gccaggccat cacccatccg cactgggcct
     3241 gggacgtggg cctgttcggc cgcccgcatg acctgggcaa catctccacc taccgtggca
     3301 acccgaccgg gctggaggac tacatcggct ggctcggcag caacttcgat ccctccattt
     3361 cgtggaaaga cctggagtgg atccgcgaat tctggaaggg cccgatggtg atcaagggca
     3421 tccttgatcc ggacgatgca cgtgatgcgg tgaagttcgg cgccgatggc atcgtggtct
     3481 ccaatcacgg tggccgccag ctggacggcg tgctgtccac cgcacgcgca ttgccggcca
     3541 ttgccgatgc agtgcagggc gacctgaaga tcctcgccga ttccggtatc cgcaccggcc
     3601 tggacgtggt gcgcatgctg gcgctgggcg ctgataccgt gctgctgggc cgtgccttcg
     3661 tctatgcact ggctgcgcag ggcgaagccg gggtggccaa cctgctggac ctgatcgcca
     3721 aggagatgcg cgtagcgatg acactgaccg gtgcgcgcag tatcgccgac atcggccgcg
     3781 actcgctggt cagcctgccg tgagtggcca cgatgccgtg ctggtgcagt tacgcgatgc
     3841 ggtcggcagc cgccatgtac tgaccggtga caaggccacc cgccgtttcc gccgtggcta
     3901 ccgcttcggc gacggcccgg tactggcggt ggtacggccg ggcacgttgc tggaactgtg
     3961 gcacgtgctg caggccgcgg tgcagggtgg ggcggcgatc atcctgcagg cggccaacac
     4021 cggcctgacc ggcggctcga ccccggatgg caacgactat gggcgaccga tcgtgctggt
     4081 cagcacgctg cgcctgaccg gcatccagct gttgaacggc ggccggcagg tgctgtgcct
     4141 gcctggcgcg acgctggatc ggctggaaca gacgctggcg ccattgggcc gcgaaccgca
     4201 ttcggtgatc ggctcgtcct gtatcggcgc ctcggtgctg ggtgggatct gcaacaactc
     4261 cggtggcgcg ctggtgcgtc gcggcccggc ctataccgag cttgcgttgt acgcgcaggt
     4321 cgatgcgcag ggccagctgc agctggtcaa ccatctgggc atcgcactgg gcgatacgcc
     4381 cgagcagatc ctgcagcgac tgcaggccgg tgactatacg gccgccgacg tcggcgatgg
     4441 cgacggtcgt gccgcgtccg atccgcgcta tgccgaggag gtgcgccggg tcgatgccga
     4501 taccccggcg cgcttcaatg ccgaccccag ccgccacttc gaagccgcag gatctgccgg
     4561 caagctggcc gtgttcgcgg tgcgcctgga taccttcgag aaggaggccg ccgaagtctt
     4621 ctacatcggc agcaaccgca ccgacagcct cagcgcgatc cggcgccagc tgctgaccgg
     4681 cttcgagcgc ctgccgattg ccggtgagta catccaccgc gatgcctatg acatcggtga
     4741 acgctacggc aaggacagct tcctgctgat cgaccgcctc ggcactgccc gcgtgccggc
     4801 tgcgttcgcg ctgaagagcc gcgttgatgg ctggttcgaa cggttgggcc tgcgcggggt
     4861 caccgaccgg gtgatgcagg tgctgactgg gttgctgcct tcgcacctgc ccaagcgcat
     4921 gggcgagttc cgccagcgct atgagcatca tctgctgctg aaggtgtctg cgcaggacgc
     4981 agcgcagacc ggggcctggt tgcgcgactt cttcgcaggc catgaaggcg gctattttca
     5041 ctgcacggca gaggagggcc gcaaggcgtt cctgcatcgc ttcgcggtgg ccggtgctgc
     5101 cgtgcgctac cgtgaagtgc atcgcgagaa ggtgcaggac atcgtggcac tggacatcgc
     5161 gctgcgccgt gacgatgccg actggttcga gcagctgccc gccgacatcg acaaccgcct
     5221 gctgcacaag ctgtactacg ggcacttcct gtgccacgtg ttccaccagg actacatcgc
     5281 gcgcaggggc gaagacccga tggcgatcga gcacgcgatg tgggcgctgc tggaccagcg
     5341 cggcgccgag tacccggccg agcacaacgt cggccacctg tatccggcca agccggcgct
     5401 ggccgggttc tatcggcagc tggacccgag caataccttc aaccccggca tcggccagac
     5461 gtcgaaggcg aaggggtggg gtggctgcga ttgcggttag acaaccgatc cgactagcgt
     5521 cgagcttgct cgacggcctc ttttgccgga ttacatgcag tcgagcaagc gcgactctac
     5581 gggggagcgg ttaccatcgg ggttccacac gcaggagcca ccccgatgcc catcactgga
     5641 gcacgcactt tcctgtgcgc cgcactgctg gccacgccgc ttctggcgct ggcccagggc
     5701 tcgatcctgc cgcagcagcg cgatgcggcc ggcaacgtga tggagccgct gggacaggtg
     5761 ctggacgcgg caggggtgcg tcattgcacc gccgatggcg catggtgcgt gcgcgtgcag
     5821 ccggtggccc acgatggcga tcggcccaca acactggagg tgtcggagcg gggaaccgcg
     5881 gagggcgact cgcatgtcta ccacgtcagc atcgacgtgc cgcaggaaag cgaactgaag
     5941 ctgtggccat ggatcgtgcg tctggcctcc ggtgtgggta gcgatgcggt ggtgaccgac
     6001 ccgcagcaac gcgcccgcca gaatgtactg gtagggggca tcgtctcctt caccttcagc
     6061 agcatgtatt ccggcggcgg tgccgatgcg tccacgttgc agttggcacg cgtgcgccac
     6121 ctgcaggacg acatccaggt ggatgacgat gtactgaccg ttccgtggca gggcaatgcg
     6181 tcgatccggg cctgtttcag tgaacaggat gcgaggcaac gggccggggc ctgccatgat
     6241 gagtacagtt tctcggcgaa actgggactg gacccggtcg cgcaggccat gccggtgctg
     6301 cgctaccaga ccgtggccac acgattcccc gccggcgcct cgcgcttcga ggattcactg
     6361 gccaagggcc cgctgaagaa aaaggacctg cgcaccgagc aggacccggc gtgcagctac
     6421 acacgtctgt tccgcttcag cgaaggaatg ttccatccgg accaggcgct gccggactgc
     6481 gcaggctata ccgaaccctg agccctgtag agccgagcat ggctcgactc tacagaagcc
     6541 cgtgtcagcg cttactcgca gcgtgcggcg gtgatgatgt tgtccttgtc catgtagacc
     6601 cgcaggcggt cctggcggat gtccttggtg gtgatggtgg tcgggccgat cgggttgacc
     6661 agcccggcgc cgctctcacg cgacagccga cgcaggtttt cttcgttgcc tggctggcct
     6721 accgcccagc ccagctgact ggcgtcgcag cggcccgttc cctttacttc cgggccgggg
     6781 gtgctgacac aggccgacag cagcaggggc gcggcaaggg cggcaacggc gagacgggtg
     6841 atgctgattc gggtcattgg aacggctcca ggtggggcat gatggcgcca ccatagcacc
     6901 gtgcccatgg cgacggcatg cgttggatca ggggcgcggc gttcacggcg ggccgggctg
     6961 gccgcgcttg atcgcttccc acaccttgtc cacgtgcgcg cgcagcgccg gcgcagccga
     7021 tgccagcgca ggatcgtcct gccggtcgcc gccgaagggt tcatcgcctt ccacctgcac
     7081 cagcgattca ccacgtactt cgtaatactg ctccccctgg cgaaggccga tgcgcaactg
     7141 ctgcgggtcc accccaccgc cacagaagct gtggctggcc aacgtaagct cggcgcggcc
     7201 gtcgttgtcc aggtcggttg cggttacctg gtccaggaaa tagccggcgt ccaggtccag
     7261 gtcttcgcat tggaccggat cttcctggag ccagcgtgac gtccagggcg ccgccaggcc
     7321 aggacgccgg aacagctctg cacgcagggt gatctgatcc aatggttcct tgtcttcctg
     7381 tgccggcgat gtctgttcgc tacgcgaaat cagcagcagg cccgcgccgt cgatgtcctc
     7441 gaacaccacc tgcctcagca gcgtgcccgg gtaaagacct ttcagatccg cgtcggatag
     7501 tgcaggagag gtctcgaacg tcgcattggg ggccgacccg ccacatccgc ccatggtcag
     7561 catgaaagcg atcaagagac attgaccggg tctgcgaatg cgtcttgcgt cagtgctcat
     7621 ccatgcccgc cactggcact ggccaggctt ttccagatgt ccatgaccgt ccgctcatcg
     7681 acccccgatg tggaagtcgc ttcattgctg agaatgaaat tgctatagaa gaagtgggca
     7741 ttggccacgg gcatgaatgc cacatgacac gttgaggtgg ctcgatacag gggcgcgtcc
     7801 cggtcgtcac aatccacttc ggcagtaaac agcgtgcggc cgttgatgat gatcggcttc
     7861 agttcatggg tagacatgcc tgaggttacc tgcaagtgcc cctgagcatc aggagacgct
     7921 gttgctgcaa tgccgaaatc agtgatgaac tgctcgctgg aggagaaaca gagaaacccg
     7981 atgctcttgt gctttcgccg gaagtcaagg cacttggtct gtggataatt gcgtgcaatc
     8041 ggaccatcag ctgtgactgt aattcctctt ggggagcgca cactgagttc gttgtccttt
     8101 ggcattgatg agcaagcggg agcccaaagg caggagaggg ctagcagtgc tgtaagcctg
     8161 tttgataact gcttcatggt gtgcgcatag gacatgatgt gcccataaga gcggttgtag
     8221 ctgatcggaa ctgatgctgt ctgcgtcaga ctcccattac cagttgcggt ggcccgatgc
     8281 agggggcgtt tccgtcatca gcgtccactt cggcagtaga cagcctgcga ccgttgatgg
     8341 tgattggcgt catctcatag gtcgacacgc ccgaggcgac tagtaagtgc gcttgaggat
     8401 caggagaatt tgctgtcgcc gtaatgccgg aagcggtggt gagcttcttg ctgggagaag
     8461 ggcaggtaga tccaacgctc tcaccaggtt ctttgttctc tggcg
//
LOCUS       DAOKIP010000175         8462 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.175,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000175 DAOKIP010000000
VERSION     DAOKIP010000175.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 8462)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8462)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8462
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.175"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            84..575
                     /locus_tag="QEL58_003176"
     CDS             84..575
                     /locus_tag="QEL58_003176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006365152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheW"
                     /protein_id="HDS1677614.1"
                     /translation="MNDKTSSAASAGGEFLSFTLGAEHYGVDILKVQEIRGYDAVTRV
                     PDAPDYIKGVINLRGTIVPVIDLRLKLRLDNARYDAFTVMIVLNVEDRVVGIVVDSVS
                     DVIPLSAEQILPTPEFGAAVDTRFISGIGTHDDRMLILLDIETLLDSADMGQAAVAED
                     AAA"
     gene            712..1095
                     /locus_tag="QEL58_003177"
     CDS             712..1095
                     /locus_tag="QEL58_003177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003486337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677615.1"
                     /translation="MKSLLAFVSAAVLATTASSAFAQSADMIPPELAPRSVGKDGMVC
                     GKVEKARYAEGSEGQPTFLYMGGAFPRHTFSARIAGENRGKFSFPLETLEGKTVCVIG
                     KIQRDASRAEIEVSSPAGLKLANIK"
     gene            1197..3572
                     /locus_tag="QEL58_003178"
     CDS             1197..3572
                     /locus_tag="QEL58_003178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003486335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MCP four helix bundle domain-containing protein"
                     /protein_id="HDS1677616.1"
                     /translation="MPWINNLKLMPKLLLTFGVLLLVMLLQGIVAYRGLHSLNNVTTE
                     LAGSRMESIRMAGEMRGMLGEYRNAAYQQLIRASDDVKSDARKQAVELRESMDKSIKG
                     YPALVDNAQQKKLFDTFAKEWKDALASYDSVTEMLELDLPDDAIDTFVGETRTKHRKA
                     ASALEALIAEDNRLARASREEAESTYAASAVLTVIALLGGAALGLVLVWLFARALVGS
                     VRGAVSVANDVAGGKLDGHIDVSRQDEVGELMQAMQRMQRDLRERIETDQAVARENLR
                     IRTALDYSSTGVYLTDTSNTIVYSNRALQQTLSQYQDEVRRDLPDFDAQASLIGKPVT
                     VLEHRGEMDQTLLGNLKAHGVARRPMQYGDAQFAQVVSTIRNEGGDTVGYVVEWRDRT
                     QEALVEAEVARVIAQAAAGDLSGRIDASDKEGFFLQLAQQINGLLDANAGSIEQISGL
                     LAALSQGDLTVRMHGDYQGVFARMRDDANATAAQLSEIVTRIKQSSRAINSAAGEIAS
                     GNSDLSRRTEQQAANLEETAASMEELTSTVRQNAEHARQANQLAIGAHGVASQGGEVV
                     GQVVTTMSAIQASSKKIAEIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASE
                     VRTLAQRSAAAAKEIKGLIDDSVGKVNDGSALVHKAGATMGEIVASVQRVTDIMAEIS
                     AASQEQSAGIEQVNQTVVQMDETTQQNAALVEEATAAARAMEEQAGHLSEAVSIFVVD
                     EAEAVTAPRVATPAPRAAAPAAPAAVPPPARRTAGGRPMATELADGDWQEF"
     gene            complement(3625..4656)
                     /locus_tag="QEL58_003179"
     CDS             complement(3625..4656)
                     /locus_tag="QEL58_003179"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677617.1"
                     /translation="MEHICTAMEGHIELLNYAAHALEEMNVLIPRIKGSMPGIRQAHE
                     AIASYLHRSVKFLLPNCAEMIDLRELRQVHVDMARPPFEVMALEAAWILPDGLAGHKG
                     AGHAAPRRIALCLNMNREVAAAFPATECFLDEPAGGVVVIPIYWQADAAAWKVPLGGV
                     FLPHQNPLSLYRPEEASLPTRLVNAPVEAMASGKPLQQFRVAPFALLPEWHAWAVEQQ
                     GSAAVKAQIVQDCRDEVAMLLQTCCVLNCANVASVERPASLALNKRRMRRGKQPFFSY
                     RVFEVDGATAASDGTGPGGGAAGPRTHVRRGHIRRLKEKLVWVRAAIVNAGSPDGLLH
                     KSYRLRQPQ"
     gene            4745..6079
                     /locus_tag="QEL58_003180"
     CDS             4745..6079
                     /locus_tag="QEL58_003180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008267395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent aminotransferase family protein"
                     /protein_id="HDS1677618.1"
                     /translation="MARSRFKQVVDGLVSDIQSGNLRPGTRLPTHRELARRHDLALAT
                     ASRVYAELARMGLVIGEIGRGTYVREAFGAQGMACDMLAGLGSGIDLNANMPTAFGQD
                     TQLRRALRHLSQQGDLEALLLYQPPLGRPQERQLVADYLVQRGVPTDAGRVALVQGAQ
                     HGLTVALLGALCPGDAIAVDALTYPGFRQIAAMLRMEMIPVPVGPEGTDLQALRTLCS
                     QRRVKAVYCMPTMHNPLGFVLTLQQRQELAAIARQHGLLVLEDAAYAYLAAPAVVPVA
                     ALAPERTVYIGGLSKNLATGLRFGYISAPPAMMGAIERAIRATTVNSPALVTALVRRW
                     LMDGTVDRMERHRRADARHRQALARRLLEGVALVGHPGSYLLWLPLEGRDRAEAICQD
                     LHEQGIVLSTAAPFAVGTHVPNALRIALGTVDPSTLERALAQVRLRLDQLAG"
     gene            6207..>8462
                     /locus_tag="QEL58_003181"
     CDS             6207..>8462
                     /locus_tag="QEL58_003181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cache domain-containing protein"
                     /protein_id="HDS1677619.1"
                     /translation="MNLLHRWQHYFSNLSVRRKLNLLTLLIALGVIALSVIAARMQYL
                     DLTETRKTALKTQVELSYGILQHYHRLAGTGELSEEAAKGAALQALESMRAENDTYYF
                     NIYDTGYRLLMHPFRKDLVGKDMKDFRTDDGVRIYYDQVEAAKAGGGFVNYRWAKPGS
                     KGDVGKVAYAGLFAPWNWVVSSGVYMDDVQKQALVFTAIMAVSGGVLVLIVLALSWVI
                     GNRIARPLKQATAVAEGIASGKLDSHIGPQPHDEPGRLLHAMSGMQQQLHAVIGGQRE
                     MARRHDAGELSYRIDASAFPGEYGLMVQETNALVGGHVQTLHDVLDVVQQYAIGDLSR
                     DIARYPGEKATMTATVDTVKTNLGRINAEIKQLASAAAAGDFSRRGDAQRFDHDFRLM
                     LENLNAMMAVSDDNLGKLSQLLSAIAEGDLTARMHGDYQGVFARMRDDANTTVAQLTQ
                     IVGQIQASASSITLAAGEIASGNGDLSRRTEQQAANLEETAASMEELTSTVRQNAEHA
                     RQANQLAIGAQGVASQGGEVVGQVVTTMSAIEASSKKIAEIISVIDGIAFQTNILALN
                     AAVEAARAGEQGRGFAVVASEVRTLAQRSAAAAKEIKGLIDDSVGKVAEGSSLVHQAG
                     STMGEIVASVQRVTDIMAEISAASQEQSAGIEQVNQTVVQMDETTQQNAALVEEATAA
                     ARAMEDQAGQLADAVAIFRLDNQVSAAMKAVAAHVEPARVTASAPRPQAAPAPAAVRR
                     SSNASTFVASDS"
BASE COUNT         1497 a         3041 c         2677 g         1247 t
ORIGIN      
        1 cagggcgcca cagctaaagt cccccacggc ggggccgata tcgagcctga caccgggact
       61 tccggcagaa ccaggacccc tcgatgaacg acaagaccag ctccgccgcc agcgccggtg
      121 gcgaattcct cagcttcacc ctcggtgccg agcactacgg cgtggacatc ctcaaggtgc
      181 aggaaatccg cggctatgac gcggtcaccc gcgtgccgga tgcgccggac tacatcaagg
      241 gcgtgatcaa cctgcgcggc accatcgtcc cggtcatcga cctgcgcctg aagctgcgcc
      301 tggacaacgc ccgctacgac gccttcacgg tgatgatcgt gctgaacgtg gaagaccgcg
      361 tggtcggcat cgtggtggac agcgtctcgg acgtgatccc gctgtcggcc gagcagatcc
      421 tcccgacccc ggagttcggc gccgccgtcg atacccgctt catctccggc atcggcaccc
      481 acgatgaccg catgctgatc ctgctggaca tcgagaccct gctcgacagc gccgacatgg
      541 gccaggccgc cgttgccgaa gacgccgccg cctgatccag cggacctgct tcacgttctg
      601 gtcacacaac ccttcagttc cccctggcgg tgccgatagg gggacagaag ccggtcgcgc
      661 aggagcgcgc agaaccggaa cgaccatcac catccccgga gatacacctc gatgaagtcc
      721 ctgcttgcgt tcgtctcggc cgctgtcctg gccaccaccg cctcctccgc gttcgcccag
      781 tcggccgaca tgatcccgcc ggaactggca ccgcgttcgg tcggcaagga cggcatggtc
      841 tgtggcaagg tcgaaaaggc ccgctacgca gaaggttccg aaggccagcc gaccttcctg
      901 tacatgggcg gcgccttccc gcgccacacc ttctcggccc gcatcgccgg cgagaaccgc
      961 ggcaagttct ccttcccgct ggaaaccctg gaaggcaaga ccgtgtgcgt gatcggcaag
     1021 atccagcgcg acgcctcgcg tgcggagatc gaagtcagct cgccggctgg gctgaagctg
     1081 gccaacatca agtaatccgc tgtccgtcga accacgccgg agctcgtgcc ggcgtggttt
     1141 ctgctgcaac cgggcccgat gcccgggcgc gtctgcctta ggagctcgca acgcccatgc
     1201 cgtggatcaa caacctgaaa ctgatgccga agctgctgct gaccttcggc gtcctcctgc
     1261 tggtgatgct gctgcagggc atcgtcgcct atcgcggcct gcattcgctg aacaacgtca
     1321 ccaccgagtt ggccggttcg cgcatggaaa gcatccgcat ggccggcgag atgcgcggca
     1381 tgctgggcga gtaccgcaac gccgcctatc agcagctgat ccgcgccagc gatgacgtca
     1441 agtccgacgc gcgcaagcag gccgtcgagc tgcgcgagag catggacaag tcgatcaagg
     1501 gctacccggc gctggtcgac aatgcgcagc agaagaagct gttcgacact ttcgccaagg
     1561 aatggaagga cgccctggcc tcctatgaca gcgtcaccga gatgctggaa ctggacctgc
     1621 cggacgacgc catcgatacc ttcgtcggcg agacccgcac caagcaccgc aaggccgctt
     1681 cggcgctgga agcactgatc gccgaagaca accgcctcgc ccgcgcctcg cgcgaagagg
     1741 ccgaatccac ctacgccgcc tcggccgtgc tgaccgtgat cgccctgctg ggcggcgccg
     1801 cgctcggcct ggtgctggtc tggctgttcg cccgtgccct ggtcggcagc gtccgtggtg
     1861 ccgtctcggt ggccaacgac gtcgccggcg gcaagctcga cggccacatc gacgtcagcc
     1921 gccaggacga agtgggcgaa ctgatgcagg ccatgcagcg catgcagcgc gacctgcgcg
     1981 agcgcatcga aaccgaccag gccgtggccc gcgagaacct gcgcatccgc accgcgctgg
     2041 actacagctc gaccggcgtg tacctgaccg acaccagcaa caccatcgtc tacagcaacc
     2101 gcgcgctgca gcagaccctg agccagtacc aggatgaagt gcgccgcgac ctgccggact
     2161 tcgatgccca ggcctcgctg atcggcaagc cggtcaccgt gctcgagcac cgcggcgaga
     2221 tggaccagac cctgctcggc aacctgaagg cgcacggcgt cgcccgtcgc ccgatgcagt
     2281 acggcgatgc ccagttcgcg caggtggtct cgaccatccg caatgaaggc ggcgacaccg
     2341 tcggctacgt ggtggaatgg cgcgaccgca cccaggaagc gctggtcgag gccgaagtgg
     2401 cccgcgtgat tgcccaggcc gccgccggcg acctgtccgg ccgcatcgac gccagcgaca
     2461 aggaaggctt cttcctgcag ctggcccagc agatcaacgg cctgcttgac gccaacgccg
     2521 gcagcatcga acagatctcc ggcctgctcg ccgcgctgtc gcagggtgac ctgaccgtgc
     2581 gcatgcacgg cgactaccag ggcgtgttcg cccgcatgcg cgacgatgcc aacgcaaccg
     2641 ccgcacagct gagcgaaatc gtcacccgca tcaagcagtc cagccgcgcg atcaattcgg
     2701 ccgccggcga aatcgcctcg ggcaacagcg acctgtcgcg ccgtaccgaa cagcaggccg
     2761 ccaacctgga agaaaccgcc gcctcgatgg aggaactgac ctccaccgtg cgccagaacg
     2821 ccgaacatgc ccgccaggcc aaccagctcg ccatcggcgc gcatggcgtc gcctcgcagg
     2881 gtggcgaagt ggtcggccag gtggtcacca ccatgtccgc catccaggcc tcgtcgaaga
     2941 agatcgccga gatcatcagc gtcatcgacg gcatcgcgtt ccagaccaac atcctggcgc
     3001 tgaacgctgc ggtggaagcg gcgcgtgccg gcgagcaggg ccgtggcttc gccgtggtcg
     3061 ccagcgaagt gcgcaccctc gcccagcgct cggccgccgc cgccaaggaa atcaagggcc
     3121 tgatcgacga ttcggtcggc aaggtcaacg acggctcggc gctggtgcac aaggccggcg
     3181 ccaccatggg cgaaatcgtc gcctcggtgc agcgcgtgac cgacatcatg gccgagatct
     3241 ccgccgcctc gcaggagcag tcggccggca tcgagcaggt caaccagacc gtggtgcaga
     3301 tggacgaaac cacccagcag aacgccgcgc tggtggaaga agccaccgcc gccgcccgcg
     3361 ccatggaaga acaggctggc cacctcagcg aagccgtgtc gatcttcgtg gtcgacgaag
     3421 ccgaggcagt gaccgccccg cgcgtcgcca ccccggcacc gcgcgccgcc gccccggcag
     3481 ccccggctgc ggtgccaccg ccggcccgcc gcacggcggg aggtcgcccg atggccaccg
     3541 aactggccga cggagactgg caggagttct gatgccacgc ctggagggcc ggtccaacac
     3601 cggccctcct ttccgacgca gccgtcactg cggctgacgg agcctgtaac tcttgtgcag
     3661 caggccatca gggctgcccg cattgacgat ggcggcgcgc acccacacca gcttttcctt
     3721 caatcgccgg atgtgacccc ggcgcacgtg ggtgcgcggc cccgccgcac ctccgcccgg
     3781 ccccgtgccg tctgacgcgg ccgtggcgcc atccacctcg aacacccggt agctgaagaa
     3841 cggctgcttg cctctgcgca tccgccgctt gttcagcgcc aacgatgccg gccgctccac
     3901 cgacgcgaca ttggcgcaat tgagcacgca gcaggtctgc aacagcatgg cgacctcgtc
     3961 gcgacagtcc tgcacgatct gcgccttcac cgccgcactg ccctgctgct ccaccgccca
     4021 ggcgtgccat tccggcagca gcgcgaacgg cgcaacccgg aactgctgca agggtttccc
     4081 ggacgccatc gcttccaccg gggcattgac caggcgcgtg ggcaggctgg cctcttctgg
     4141 ccggtacagg ctcaacggat tctggtgcgg caggaacacg cctcccagcg gcactttcca
     4201 tgcggccgca tcggcctgcc agtagatcgg gatcaccacc acgcctccgg ccggttcatc
     4261 caggaagcac tccgtggccg gaaaggccgc ggcgacttcg cggttcatgt tcaggcacag
     4321 cgcgatgcgt cggggcgccg catggcccgc ccctttgtgt cccgccaacc cgtcaggcag
     4381 gatccacgcc gcttccagcg ccatcacctc gaacggcggg cgcgccatgt ccacgtgcac
     4441 ctggcgcagt tcacgcagat cgatcatctc cgcgcaattg ggcagcagga acttcacgct
     4501 gcggtgcagg tagctggcga tggcttcatg ggcctggcgg atgcccggca tgctgccctt
     4561 gatccgggga atcagcacgt tcatttcttc cagtgcatgc gctgcatagt tcaataattc
     4621 gatgtgacct tccatcgccg tacagatgtg ctccattcct ttccgcccgt ccggcggtgc
     4681 gatcgaagtc taggaatggc atcagtacaa tcaacaaatt gtcctagata cactcggcgc
     4741 acggatggca cgctcacggt tcaagcaggt agtcgatggc ctcgtatcgg acatccagag
     4801 cgggaacctg cgccctggaa cccgcctgcc cacccaccgc gagctcgccc gccgccatga
     4861 tctggcgctt gccaccgcca gccgcgtcta tgccgagctg gcccggatgg gcctagtcat
     4921 cggtgagatc ggtcgcggca cctatgtgcg cgaggcgttc ggcgcacagg gcatggcctg
     4981 cgacatgctg gccggtctcg gcagcggcat cgatctcaac gccaacatgc ccaccgcgtt
     5041 cggccaggac acgcagcttc gccgggccct gcgccacctc tcacagcagg gcgacctgga
     5101 agcgctgctt ctgtaccagc cgcccctggg tcggccccag gagcgccagc tcgtggccga
     5161 ctacctggtg cagcgcgggg tacctaccga tgccggacgc gtggccctgg tccagggcgc
     5221 ccagcacgga ttgaccgtcg ccctgctggg cgcactgtgc ccgggcgatg ccatcgccgt
     5281 ggatgcgttg acctatcctg gattcaggca gatcgcggcg atgctgcgga tggagatgat
     5341 cccggtgccg gtcggcccgg agggcaccga cctgcaggca ctgcgtacgc tgtgcagcca
     5401 gcgccgggtc aaggccgtgt actgcatgcc gaccatgcac aacccgctgg gcttcgtcct
     5461 gacgctgcaa cagcgccagg agctggccgc gatcgcccgc cagcatgggc tgctggtgct
     5521 tgaagacgca gcctatgcct atctggccgc gcccgccgtg gtacccgtgg cggcgctggc
     5581 accggaacgc accgtgtaca tcggcggcct gtccaagaac ctcgccaccg gcctgcgttt
     5641 cggctacatc agtgcgccgc cggcgatgat gggtgcgatc gagcgcgcca tccgcgccac
     5701 cacggtcaac tcgccggcac tggtgacggc gctggtgcgc cgctggctga tggatggaac
     5761 cgtcgaccgc atggaacgcc accgccgcgc cgacgcccgg caccggcagg cactggcaag
     5821 gcgcctgctg gaaggtgtgg cgctggtcgg ccaccccggt tcctacctgc tgtggctgcc
     5881 actggaaggg cgcgaccgcg ccgaggcgat ctgccaggac ctgcatgagc agggcatcgt
     5941 gctttcgacc gccgcgccgt tcgcggtcgg aacccacgtt cccaacgcgc tgcgcatcgc
     6001 gctgggaacg gtcgatccgt ccaccctgga acgcgccctg gcgcaggtac gcttgcgcct
     6061 ggaccagctg gctggctgaa cggccgcggc ccatcttccg cgcgcggctc aaccctgggc
     6121 ccgcgcggcc gataacgagg ttgtcaccgc atgtcccgcc gtgaccggct cggcgccgcc
     6181 cgcccgtttc gacctggtcc tgctcgatga atctcctgca tcgctggcaa cactacttca
     6241 gcaacctctc cgtccggcgc aagctcaatc tgctgacgct gctcatcgcg ctcggcgtga
     6301 tcgcgctctc ggtgatcgct gcccgcatgc agtacctgga cctcaccgag acccgcaaga
     6361 ccgcgctgaa gacccaggtc gaactgagct acggcatcct ccagcactac caccgcctgg
     6421 ccggtaccgg cgagctcagc gaagaggccg ccaagggcgc cgcgctgcag gcgctggaat
     6481 cgatgcgcgc cgagaacgat acgtactact tcaacatcta cgacaccggc taccgcctgc
     6541 tgatgcaccc gttccgcaag gacctggtcg gcaaggacat gaaggacttc cgcaccgacg
     6601 atggtgtacg catctactac gaccaggtcg aagcggccaa ggccggtggc ggcttcgtca
     6661 actaccgctg ggccaagccc ggcagcaagg gcgacgtcgg gaaggtggcc tacgccggcc
     6721 tgttcgcgcc ctggaactgg gtggtcagca gcggcgtcta catggacgac gtgcagaagc
     6781 aggcactggt gttcaccgcc atcatggcag tctccggcgg cgtgctggtg ctgatcgtgc
     6841 tggccctgag ctgggtcatt ggcaaccgca tcgcgcgtcc gctgaagcag gccaccgccg
     6901 tcgccgaagg cattgccagc ggcaagctgg acagccacat cggcccgcag ccgcacgacg
     6961 aacccggccg cctgctgcac gccatgtcgg gcatgcagca gcagctgcac gcggtgatcg
     7021 gcggccagcg cgaaatggcg cggcgccacg atgccggcga gctgagctac cgcatcgacg
     7081 ccagcgcctt ccccggcgag tacgggctga tggtgcagga gaccaacgcc ctggtcggcg
     7141 gccatgtgca gaccctgcac gacgtgcttg acgtggtcca gcagtatgcg atcggcgacc
     7201 tcagccgcga catcgcgcgc tatccgggcg agaaggccac catgaccgcc accgtcgata
     7261 cggtgaaaac caatctcggc cgcatcaatg ccgagatcaa gcagctggcc agcgccgccg
     7321 ccgcaggcga tttcagccgc cgtggcgacg cacagcgctt cgatcacgat ttccgcctga
     7381 tgctggaaaa cctcaatgcg atgatggcgg tcagcgatga caacctcggc aagctgtcgc
     7441 agctgctgtc ggccatcgcc gaaggtgacc tgaccgcacg catgcacggc gactaccagg
     7501 gcgtgttcgc acgcatgcgt gacgatgcca acaccaccgt cgcccagctg acccagatcg
     7561 tcggccagat ccaggccagc gcctccagca tcaccctggc cgccggcgag atcgcttcgg
     7621 gcaacggcga cctgtcgcgc cgtaccgagc agcaggccgc caacctggaa gaaaccgccg
     7681 cgtcgatgga agaactgacc tccaccgtgc gccagaacgc cgaacatgcc cgccaggcca
     7741 accagcttgc catcggcgcg cagggtgtcg cctcgcaggg tggcgaagtg gtcggccagg
     7801 tggtcactac catgtcggcc attgaagcct cttcgaagaa aatcgccgag atcatcagcg
     7861 tcatcgacgg catcgccttc cagaccaaca tcctggcgct gaacgccgcg gtcgaagcgg
     7921 cgcgtgccgg tgaacagggc cgtggcttcg ccgtggtcgc cagcgaagtg cgcaccctcg
     7981 cccagcgctc ggccgctgcc gccaaggaaa tcaagggcct gatcgacgat tcggtcggca
     8041 aggtcgccga gggctccagc ctggtgcacc aggccggcag caccatgggc gagatcgtcg
     8101 cctcggtgca gcgcgtgacc gacatcatgg ccgagatctc ggccgcctcg caggaacagt
     8161 ctgctggcat cgaacaggtc aaccagaccg tggtgcagat ggacgaaacc acccagcaga
     8221 acgccgcgct ggtggaagaa gccaccgccg ccgcgcgcgc gatggaagac caggccggcc
     8281 agctggccga cgcggtggcg atcttccgcc tcgacaacca ggtctcggcc gcgatgaagg
     8341 cggtggccgc ccacgtcgag ccggcccgcg tcaccgccag cgcgccgcgc ccgcaggcgg
     8401 cgcctgcgcc ggcggcggtc cgccgcagca gcaacgccag caccttcgtc gccagcgaca
     8461 gc
//
LOCUS       DAOKIP010000176         8404 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.176,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000176 DAOKIP010000000
VERSION     DAOKIP010000176.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 8404)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8404)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8404
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.176"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(10..852)
                     /locus_tag="QEL58_003182"
     CDS             complement(10..852)
                     /locus_tag="QEL58_003182"
                     /EC_number="2.1.1.63"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012480861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HDS1677620.1"
                     /translation="MDSTATTALDARVERVCRHLQASLDEPSLQELADIAGCSPTRLH
                     RLFKQATGLTPKQYAAALRADRLRTGLEHQERITDAFHDAGFGSSGRFYENAPRLLGM
                     TPKQWRSGGRGEVIHFALAESSLGSVLVASSGTGVVAILLGDDPETLLQSLQQRFRQA
                     ELVGADNGYEQLVAQVVGLVEDPTRGTTLPLDIRGTAFQQRVWQALQQIPRGQTASYA
                     DIAARIGAPRSSRAVARACASNPLAVAVPCHRVVRRDGDLSGYAWGVARKRELLRREK
                     ASTA"
     gene            985..1746
                     /locus_tag="QEL58_003183"
     CDS             985..1746
                     /locus_tag="QEL58_003183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HDS1677621.1"
                     /translation="MRLNNKIALITGASAGIGRASALRFAAEGARLVLNARRLEPLQS
                     LAEQIRAAGGEVVVHAADVADPDTAQALVDLARRSFGGLDIALNNAGMLGPGAPAAEF
                     PVDAWREVMATNLDAAFHAARAQLPALLARGGGSLVFVGTFVGHTVGFPGMAAYASSK
                     AGLIGLSQVIAAEYGARGVRSNVLLPGGTDTEMGRQAAPSGDARDFVRSLHALKRLAE
                     PEEIANAALFLASDESSFVTGTAMRVEGGVSITRT"
     gene            1858..2031
                     /locus_tag="QEL58_003184"
     CDS             1858..2031
                     /locus_tag="QEL58_003184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012511672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677622.1"
                     /translation="MSEREKDQGDPRQGVQESRQDKKQDDVARQRPGQRDQQVRDAHS
                     RDPKRKDGGQDPA"
     gene            complement(2091..2166)
                     /locus_tag="QEL58_003185"
     tRNA            complement(2091..2166)
                     /locus_tag="QEL58_003185"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2131..2133),aa:Ala,seq:cgc)
     gene            complement(2258..3213)
                     /locus_tag="QEL58_003186"
                     /pseudo
     CDS             complement(2258..3213)
                     /locus_tag="QEL58_003186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006380257.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
     gene            complement(3203..4096)
                     /locus_tag="QEL58_003187"
     CDS             complement(3203..4096)
                     /locus_tag="QEL58_003187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDS1677623.1"
                     /translation="MTSSLPAGTAGDDALRHHYLRIDGQRVHCVSAGHGEPVLLIPGW
                     PQTWYAWRHVLHALAEAGFEAIAVDPPGIGESDRPAHGYDTGSAAAVLHQTMQALGHD
                     RYQVVGHDIGMWIAYALASDQPQAVRQLAVTEAVIPGLAPEPGIFAAPADNIFLWHFM
                     FNQVADLPEALISGRERAYLEFMFDRWSYRRDAVAADTYIAAYSRPGALRAGFAWYRA
                     IPETIRQNKQRAQRRLAMPVLAIGAEHATGDAPMLTLLPHADDVRGSIVPGCGHFIME
                     EAPQAFLAQLLPFLQEARHAA"
     gene            complement(4119..5174)
                     /locus_tag="QEL58_003188"
     CDS             complement(4119..5174)
                     /locus_tag="QEL58_003188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate isomerase/epimerase"
                     /protein_id="HDS1677624.1"
                     /translation="MQTLKGPSLHLAQFAGDQAPFNSLAGIAAWAAGHGFKALQIPAW
                     DARLFDLATAADSQDYCDDIRGTLAEHGLQVSELTTHILGQLVAVHPAYDELCDGFVP
                     EALRGNPQARGEWAQQQLHLAARASRRLGLQDMGTFSGSFAWPYLFPFPQRPPGLIDA
                     AFDELARRWRPILDTCEDNGINLCYEIHPSEDLHDGTSFERFFERVGQHERCRILFDP
                     SHFVLQQLDYLQYLDIYHPLIRMFHVKDAEFRPSGRQGTYGGYADWTERAGRFRSLGD
                     GQVDFKSIFSKLAQYDYPGWATLEWECCLKDQEAGAREGAAFIRDHIIPVTDKIFDDF
                     AGAPISTAQMQQMLGIA"
     gene            5276..5857
                     /locus_tag="QEL58_003189"
     CDS             5276..5857
                     /locus_tag="QEL58_003189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HDS1677625.1"
                     /translation="MAGRPREFDRDQALRKAMLLFWQHGYEGTSMSALVEALGIASAR
                     IYAAFGSKEQLFREAVALYEEGEGGFAPRALEQASLREAIGTMLREAVLTYTRRGRPH
                     GCLVVSSASSVSPDGEGVRDWLASHRRQRTAAIIARLQQAQAEGELADDAAVQALGDH
                     FATVLHGISVQARDGISRERLLAMVDVALSPLP"
     gene            6038..8368
                     /locus_tag="QEL58_003190"
     CDS             6038..8368
                     /locus_tag="QEL58_003190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005414038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDS1677626.1"
                     /translation="MPSHTDSRRLSGLSSSFVSFRRHPLALACASLALVGSFGAAAQD
                     SAPTPTGLDTITVTAEHREQNLQEVPVSVGVVQGERMRDFTAGGDDTLLALSGRVPSL
                     YAETTTGRIFPRFYIRGLGNIDFYLGASQPVSIIQDDVVLEHVVLKSNPVYDVDQVEV
                     LRGPQGSLFGRNTTAGIVKFDTLKPTQDYTGRVSASYATYNSVSIDGGFGGPINDIAS
                     FRVSALYQHRDDYVDNTYKGPSADGTVSPKKNAMGGFDDRNVRAQLLLTPSDQFSILA
                     SAHARDYEGTSTLFLRGALTKGSNKTDVPRDKVAYDEADNNPQAYKTYGGSVKARYDF
                     GAIDFTSITAYETTSGYSRGDTDGGAAVNFPVNGVPNGYGQSMGRIRDLDQWTQEFRL
                     ASHDDSALQWQAGAFYFNGSDTTDFYQRAWFLQGAARNPNNWVRLRNKNTSWAGFGQL
                     SYAFTDKFTVTAGLRQTKDEKHTRLLKTADTAAGVVTYKGRTDVKMSDTTPSWDLSAM
                     YQITPDVSVYAKVARGFRGPTIQGRSAVFNADFTTADSETILSWEAGVKSSLWDNRLR
                     LNATAFTYTVNDIQLNGNDSDGNGVLFNADKAKAYGFEADMELRPIPNLTLSAGLSLL
                     HSEIKDKRVYAQVCGLNGQVVCTVGDPTIKVGANTFAQIDGNPLPNAPKYNVNLAARY
                     DFPVSDAGTMFVSTDWNKQGYTSFVLYDTKEFNSKGDFEGGLKIGYSGNYGAYEVALF
                     ARNITNEKNLKGVIENYMAAVYNEPRTVGVSLNMNW"
BASE COUNT         1420 a         2757 c         2911 g         1316 t
ORIGIN      
        1 gcacccacat caggcagtcg aggccttttc ccggcgcagc agttcgcgct tgcgcgcgac
       61 gccccaggcg tagccggaca ggtcgccgtc gcggcgcacc acgcggtggc agggcacggc
      121 caccgccagt ggattgcttg cgcaggccct ggccactgcg cggctcgagc gtggtgcgcc
      181 gatgcgcgcg gcgatgtcgg catacgaggc agtctgcccg cgtggaatct gctgcagcgc
      241 ctgccagacc cgctgctgga acgcggtgcc gcggatgtcc agcggcagcg tggtgccacg
      301 cgtggggtcc tcgaccaggc ccacgacctg ggccaccagt tgttcatagc cgttgtcggc
      361 gccgaccagt tcggcctggc ggaaacgctg ctgcagcgac tgcagcagtg tctccggatc
      421 gtcgccgagc aggattgcga ccacgccggt cccgctgctg gccaccagca cgctgcccag
      481 cgagctttcg gcaagcgcga agtggatgac ttcgccgcga ccacctgagc gccactgctt
      541 cggggtcatg cccagcaggc gcggggcgtt ctcgtagaag cgcccgctgg aaccaaagcc
      601 ggcgtcgtgg aaggcatcgg tgatgcgctc ctggtgttcc aggccggtgc gcaggcggtc
      661 ggcgcgcagc gcggcggcgt actgcttggg ggtcagcccg gtggcctgct tgaacagacg
      721 atgcaggcgc gttgggctgc agccggcgat gtcggccagt tcctgcagag agggctcgtc
      781 gaggctggcc tgcagatggc ggcagacccg ttcgacgcgg gcatcgaggg cggtagtggc
      841 ggtgctgtcc atgaccagat tctggcatgt gccggttctg cggaaactcc gtttcctgca
      901 ccgatcgacg aagcccggaa acggagtgtt ggcgggccga aggcgcggca tcgtggcggc
      961 cacttcacaa ccggtaccac ggacatgcgc ctgaacaaca agatcgccct catcaccggt
     1021 gccagcgctg gcattggccg cgccagcgcg ctgcgcttcg ctgccgaagg cgcaagactg
     1081 gtgctcaacg cgcggcggct ggaaccgctg cagtcgctgg ccgagcagat ccgtgccgcg
     1141 gggggcgagg tggtggtgca tgccgccgac gtggccgacc ctgacaccgc gcaggcgctg
     1201 gtcgatctgg ccaggcgctc attcggcggc ctggacatcg ccctcaacaa tgccggcatg
     1261 ctcggccccg gcgcgccggc cgcggaattc ccggtggatg cctggcgcga ggtgatggcg
     1321 accaacctgg atgccgcctt ccatgctgct cgcgcgcagt tgccggcatt gctggcacgt
     1381 ggcggcggct cgctggtgtt cgtcggcacc ttcgtcggcc acaccgtggg cttcccgggc
     1441 atggcggcct atgcgtcgag caaggccggg ctgatcggcc tgagccaggt gatcgccgcc
     1501 gaatatggtg cacgtggcgt gcgcagcaac gtgctgctgc ccggtggcac cgataccgaa
     1561 atgggccggc aggccgcgcc cagtggcgac gcgcgtgact tcgtgcgctc gctgcacgcg
     1621 ctcaagcgcc tggccgagcc ggaggagatc gccaacgcgg cgctgttcct ggccagcgat
     1681 gaaagcagct tcgtgaccgg caccgcgatg cgtgtggagg gtggggtgtc gatcacccgc
     1741 acctgagaag agtcatttgc ggctgcacgc gctgttggcg cagggctgac ctgctgatta
     1801 cccggcgatc tctagggtag gggtagcgcc ggtgtcccgc cggcgaagga gcgatggatg
     1861 agcgagcgcg agaaagacca gggcgacccc aggcaggggg tgcaggaaag ccgccaggac
     1921 aagaagcagg acgatgtggc caggcagcgg ccggggcagc gcgaccagca ggtgcgcgat
     1981 gcgcattcgc gcgacccgaa gcgcaaggat ggcgggcagg atcccgcctg aacgggccac
     2041 tgaaaagaaa aaacccgtag atcgcaggat ctacgggttc ttccgaatag tggtggagcc
     2101 aaggaggatc gaactcctga cctcgtcatt gcgaacgacg cgctctccca gctgagctat
     2161 ggccccacgg cagggcttca gtgtagcgct gcccgccggg cttgccaagc gcggggccgg
     2221 gacggccgta acgttgcgtc tacggccgcc ccggccttca ggacagcgcc cggcgcagca
     2281 gcacgcccgc gcgctgcgct gccacccggg tggaggcagc cactccgcca agatggacgc
     2341 aggcatggat cattccgggc agcctttcca gcgtgcagtc gacgcccgca gcttgcaggc
     2401 gccgcgcgca gcttgcaggc gccgcgcgta ctgctcggcc tcgtcacgca gcgggtcgtg
     2461 ctcgcagctg agcaccgagg cgggggccag cccctgcaga tccgtcgcgt gggccggcga
     2521 ggccagtgcc ggcggcgcat ccaggtcgcc cagatcgccc aggtaggcct gccagcagcg
     2581 ttgcatcagc tcggcgctga ggtagaagcc attggcgtac tcgcggtagg agtcgctgcc
     2641 catgctggca tccagtgccg ggtacagcag cagctggtgg cgcggctgcg gcaggccgag
     2701 atcgcgcagc agcaggcagc atgcggcggc cagattgccg ccagcgctgt cgccaccgat
     2761 cgccagccgt tgcgggtcca gtcccagacg cccggcattg gcctgcagcc actgccaggc
     2821 atcggcaacg tcgtgcagcg gtaccgggaa gggatgttcc ggcgcgagcc gatagccgac
     2881 ggcgacgatc acccagccac tgctattggc caaggcgcgg caggggccgt catagaccgc
     2941 cagcgaacac tggaaccagc caccaccatg ggcgaacagc agggcgggtg ccggtccatc
     3001 gggcagccca tccggtgtgt acaggcgtag ctccagggca tgaccgtcgc gcgtggtcaa
     3061 tgtgtgttcg atcacgtgtg cgaccgcttg gggtgctccc tgcagttgcg gcagtgtgct
     3121 ctcgctgatc gcgcgcagcg ctcgcagatc atccggcagc ggatgcgcgg caacggcgtc
     3181 gacgaactgc tgcagttccg cttcaagcgg catggcgtgc ctcctgcagg aacggcagca
     3241 actgcgccag gaacgcctgc ggcgcttcct ccatgatgaa gtggccgcag cccggcacga
     3301 tgctgccgcg cacgtcgtcg gcatgtggca gcagggtcag catcggcgca tcgccggtgg
     3361 catgttcggc gccgatcgcc agtaccggca tcgctagccg acgctgcgca cgctgcttgt
     3421 tctgccggat cgtttccgga atcgcgcggt accaggcgaa gccagcccgc agcgcgccgg
     3481 gacggctgta ggcggcgatg taggtatcgg cagcgacggc atcgcgacgg tacgaccagc
     3541 gatcgaacat gaattccagg taggcgcgct cgcggccgct gatcagcgct tcgggaagat
     3601 cggcgacctg gttgaacatg aaatgccaga ggaagatgtt gtcggccggt gcggcgaata
     3661 tgcccggttc cggggccagg cccggaatca ccgcctcggt gaccgccagt tggcgcacgg
     3721 cctgcggctg gtcgctggcc agcgcatagg cgatccacat gccgatgtca tggccgacca
     3781 cctggtagcg gtcgtggccc agcgcctgca tggtctggtg caggacggcg gcggcgctgc
     3841 cagtgtcgta gccgtgtgcg gggcgatcgg attcgccgat gccgggcgga tcgacggcga
     3901 tggcttcgaa gccggcctcg gccaaggcgt gcagcacatg gcgccaggcg taccaggtct
     3961 gcggccagcc gggaatcagc agcaccggtt caccgtggcc ggcggacacg caatgcacac
     4021 gctggccgtc gatgcgcagg tagtggtggc gcagggcgtc gtcgccggca gtgccggcgg
     4081 gaagggaaga agtcatgggg ggaaggctct gttgggtctc aggcgatgcc gagcatctgc
     4141 tgcatctgtg cggtgctgat cggcgcaccg gcgaagtcgt cgaagatctt gtcggtgacc
     4201 gggatgatgt ggtcgcggat gaacgcggcg ccttcgcgcg cgccggcttc ctggtccttc
     4261 aggcagcact cccattccaa tgttgcccag cccgggtagt cgtactgggc cagcttggag
     4321 aagatcgact tgaagtcgac ctggccatcg cccagcgagc ggaagcggcc ggcgcgctcg
     4381 gtccagtcgg cgtaaccgcc ataggtgccc tggcggccgc tggggcggaa ctccgcgtcc
     4441 ttgacatgga acatgcggat cagcgggtgg tagatgtcca ggtactgcag gtagtccagc
     4501 tgctgcagca cgaagtggct gggatcgaac aggatgcggc agcgttcgtg ctggccgacg
     4561 cgttcaaaga agcgctcgaa gctggtgccg tcgtgcaggt cctcgctggg atggatctcg
     4621 tagcagaggt tgatgccgtt gtcctcgcag gtgtcgagga tcggccgcca gcgccgggcc
     4681 agttcatcga acgctgcatc gatcaggccc ggcggacgct gcgggaacgg gaacaggtag
     4741 ggccaggcga acgagccgga gaaggtgccc atgtcctgca ggccgagccg gcgcgaggcg
     4801 cgggcggcca ggtgcagctg ctgctgcgcc cattcgccgc gggcctgcgg attgccgcgc
     4861 agcgcttccg gtacgaagcc gtcgcacagt tcatcgtagg ccggatgcac ggccaccagc
     4921 tggccgagga tgtgcgtggt cagctcgctg acctgcaggc cgtgttcggc cagggtgccg
     4981 cggatgtcgt cgcagtagtc ctggctgtcg gcggcggtgg ccaggtcgaa caggcgcgca
     5041 tcccaggccg gaatctgcag ggccttgaag ccgtggccgg ccgcccacgc ggcgatgccg
     5101 gcgaggctgt tgaacggggc ctggtcgccg gcgaactgcg ccaggtgcag gctggggccc
     5161 ttgagggtct gcatgtgttt ctccaattgt tggtcgatca acaaagaata ggcacgaccc
     5221 tcgcggtggt caacacccgc gttacactgc gcgcctcact ggagcaggca ggcagatggc
     5281 agggcgaccg cgcgaattcg acagggacca ggcgttgcgc aaggcgatgc tgctgttctg
     5341 gcagcacggc tacgaaggca cctcgatgtc ggcgctggtc gaagcactgg gcatcgcctc
     5401 ggcgcgcatc tatgccgcgt tcggaagcaa ggagcagctg ttccgcgagg cggtggcgct
     5461 gtacgaagag ggcgagggtg gtttcgcgcc acgcgcgctg gagcaggcat cgctgcgtga
     5521 ggccatcggc acgatgctgc gtgaggcggt gctgacctac acccggcgcg ggcgcccgca
     5581 tggctgcctg gtggtgtcct cggccagcag cgtgtcgccc gacggcgaag gcgtgcgtga
     5641 ctggctggcc agccatcgtc gccagcgtac ggcggcgatc atcgcgcgct tgcagcaggc
     5701 gcaggccgag ggtgagctgg ccgacgacgc ggcggtgcag gcgctgggcg accatttcgc
     5761 cacggtgctg catggcattt cggtgcaggc ccgcgatggc atcagccgcg agcggctgct
     5821 ggcaatggtc gatgtggcgc tgagcccgct tccctgagtc aagcccgaaa ggcgtgccaa
     5881 atgccgagtg actgtgccga aaccgcttgt ttcaccgggg ttggagctcg cgcaacgaaa
     5941 tcgtaacaat ttgggggata atggcggctt gcgcagtttt cctccttttt gccgcccggc
     6001 tcgcgcaggc cgcacggacg cctcctcaga gcattgcatg ccctcccata ccgattcccg
     6061 ccgcctgtcg ggtctgtcgt cttccttcgt ttccttccgc cgccacccgc tggccctggc
     6121 ctgtgccagc ctggccctgg tcggcagctt cggcgccgcc gcgcaggaca gcgcgccgac
     6181 cccgaccggg ctggacacga tcaccgtgac cgccgagcac cgcgagcaga acctgcagga
     6241 agtgccggtc tcggtcggcg tggtgcaggg cgagcgcatg cgcgacttca ccgccggcgg
     6301 tgacgacacc ctgctggcgc tgtccggccg cgtgccgagc ctgtatgcgg aaaccaccac
     6361 cggccgcatc ttcccgcgct tctacatccg cggcctgggc aacatcgact tctacctggg
     6421 tgcctcgcag ccggtgtcga tcatccagga cgacgtggtg ctggaacacg tggtgctgaa
     6481 gtccaacccg gtctatgacg tggaccaggt ggaagtgctg cgcggcccgc agggttcgct
     6541 gttcggtcgc aacaccaccg ccggcatcgt caagttcgac accctcaagc cgacccagga
     6601 ctacaccggc cgcgtcagcg ccagctacgc gacctacaac agcgtgtcga tcgatggcgg
     6661 cttcggtggc ccgatcaacg acatcgcgtc gttccgcgtg tcggccctgt accagcaccg
     6721 cgatgactac gtcgacaaca cctacaaggg cccgagcgcc gacggcaccg tcagcccgaa
     6781 gaagaacgcg atgggcggct tcgacgaccg caacgtgcgc gcgcagctgc tgctgacccc
     6841 gagcgaccag ttctcgatcc tggcctcggc ccatgcccgt gactacgaag gcacctcgac
     6901 cctgttcctg cgcggtgcgc tgaccaaggg ctcgaacaag accgacgtgc cgcgcgacaa
     6961 ggtggcctac gacgaagccg acaacaaccc gcaggcctac aagacgtacg gcggctcggt
     7021 gaaggcacgc tacgacttcg gtgcgatcga cttcacctcg atcaccgcct acgagaccac
     7081 ctccggctac agccgtggcg acaccgacgg cggcgctgcg gtgaacttcc cggtcaatgg
     7141 cgtgccgaac ggctatggcc agtcgatggg ccgcatccgc gatctcgacc agtggaccca
     7201 ggagttccgc ctggccagcc atgacgacag cgccctgcag tggcaggccg gtgcgttcta
     7261 cttcaacggc agcgacacca ccgacttcta ccagcgtgcg tggttcctgc agggtgcggc
     7321 ccgcaacccg aacaactggg tgcgcctgcg caacaagaac acctcgtggg ccggcttcgg
     7381 acagctgagc tacgccttca ccgacaagtt caccgtcacc gccggcctgc gccagaccaa
     7441 ggacgagaag cacacccgcc tgctgaagac cgcggacact gctgctggcg tggtcaccta
     7501 caagggccgc accgacgtca agatgtccga caccaccccg agctgggatc tgagcgcgat
     7561 gtaccagatc acgccggacg tgagcgtcta cgccaaggtt gcccgcggct tccgcggccc
     7621 gaccatccag ggccgctcgg ccgtgttcaa cgccgacttc accaccgccg attccgagac
     7681 catcctgtcc tgggaagcgg gcgtgaagag cagcctgtgg gacaaccgcc tgcgcctgaa
     7741 tgccaccgcg ttcacttaca ccgtcaacga tatccagctc aacggcaacg attcggacgg
     7801 caacggcgtg ctgttcaacg ctgacaaggc caaggcctac ggcttcgaag cagacatgga
     7861 gctgcgcccg atcccgaacc tgaccctgag cgccggcctg agcctgctgc acagcgagat
     7921 caaggacaag cgcgtctatg cgcaggtctg cggcctcaac ggccaggtgg tctgcaccgt
     7981 cggtgacccg accatcaagg tcggtgccaa caccttcgcg cagatcgatg gcaacccgct
     8041 gccgaacgcg ccgaagtaca acgtcaacct ggccgcccgc tacgacttcc cggtcagcga
     8101 tgccggcacc atgttcgtgt ccaccgactg gaacaagcag ggttacacca gcttcgtgct
     8161 gtacgacacc aaggaattca attccaaggg tgatttcgag ggtggcctga agatcggcta
     8221 ctcgggcaac tacggtgcct acgaagtggc gctgttcgcg cgcaacatca ccaacgagaa
     8281 gaacctcaag ggtgtgatcg agaactacat ggcggcggtc tacaacgaac cgcgcaccgt
     8341 cggtgtctcg ctgaacatga actggtaata cgcgattgcg gtggcggtgc atgccgccgc
     8401 catc
//
LOCUS       DAOKIP010000177         8318 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.177,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000177 DAOKIP010000000
VERSION     DAOKIP010000177.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 8318)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8318)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8318
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.177"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(46..693)
                     /locus_tag="QEL58_003191"
     CDS             complement(46..693)
                     /locus_tag="QEL58_003191"
                     /EC_number="1.17.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase subunit gamma"
                     /protein_id="HDS1677627.1"
                     /translation="MKYAPHPRQIIRYRAPTRINHWIVAICFVLTALSGLALFHPALF
                     PLTQLFGGGPWTRILHPFIGLAMVIGFALLALRMWRDNFLSADDRAWMRGMRDVLRNE
                     DEKLPPVGRFNAGQKLLFWAIIGCLSALLLTGFVIWRQYFSHFFPIGVIRFSVLAHAL
                     FGWVLVCAIVVHIYAAIWIKGSVRAMTQGKVTYGWAYKHHRQWFRDILRGRREEG"
     gene            complement(690..1607)
                     /gene="fdxH"
                     /locus_tag="QEL58_003192"
     CDS             complement(690..1607)
                     /gene="fdxH"
                     /locus_tag="QEL58_003192"
                     /EC_number="1.17.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006389637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase subunit beta"
                     /protein_id="HDS1677628.1"
                     /translation="MSLQSLDIIRRSATTTPSPEARGAHTGQVAKLIDVSKCIGCKAC
                     QVACMEWNDLRDEVGSCVGSYDNPPDLSEQSWTVMKFREYEDEKGKLEWLIRKEGCMH
                     CSDPGCLKACPSPGAIIQYANGIVDFQEENCIGCGYCVTGCPFDVPRISKKDHKAYKC
                     TLCSDRVAVGQEPACVKTCPTGAITFGSKQAMTEHAAGRVEDLKSRGYENAGLYDPQG
                     VGGTHVMYVLQHVDKPELYADLPKDPRISPMVEVWKGVAKPLGVLAIAATAFVGFLHY
                     IGIGRNTVNDEEEEEAEHEAKKIEEEQRP"
     gene            complement(1618..4686)
                     /gene="fdnG"
                     /locus_tag="QEL58_003193"
     CDS             complement(1618..4686)
                     /gene="fdnG"
                     /locus_tag="QEL58_003193"
                     /EC_number="1.17.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014648272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_except=(pos:complement(4096..4098),aa:Sec)
                     /transl_table=11
                     /product="formate dehydrogenase-N subunit alpha"
                     /protein_id="HDS1677629.1"
                     /translation="MPSMSRRQFLKVTGTTLVGSSLALMGFAPGIALAEVRQYKLTRA
                     TETRNTCTYCSVACGILMYSLGDGAKNAEPSIFHIEGDPDHPVNRGTLCPKGAGLADI
                     IHSKSRLLYPEYRAPGSNEWKRLSWDDALDRIARLMKEDRDANFVEKNEAGQTVNRWL
                     TTGMLAASATSNETAVLTHKVVRSLGMLAFDNQARVUHGPTVAGLAPTLGRGAMTNHW
                     VDIKNADLILIMGGNAAEAHPCGFKWVTEAKAHNKARLIVVDPRFNRSAAVADVYAPI
                     RTGTDIVFLGGLINYLLTEDRIQHEYVLNYTDMSFLVKDEFAFKDGLYSGYNEEKRSY
                     DRSSWDYVYGDDGFVRSDPTLKDPRCVYTLLKQHYARYTVEMVERICGTPADSIRQVW
                     DMIASTAGKDKAMTILYALGWTQHSVGAQNVRAGTMVQLLLGNIGVAGGGMNALRGHS
                     NIQGLTDIGLMSDLLPGYLTLPKQDEQDYDAYIAKRTQKPLRANQMSFWQNYPKFHVS
                     LMKSWWGDAATADNNWCFDYLPKLDKPYDMLQAYELMNEGKIHGYICQGFNPLASAPN
                     KGKLISAFSKLKFMVSMDPLETETIAFWQNHGALNDVDPRAIQTEVFRLPTTSFAEEN
                     GAVVNSSRWLQWHWKGANPPGEARSDIEIMSELFHRIKAMYEKDGGAWWEPVRDLAWK
                     YSNPEVPTPEELAMEYNGKALADVFDPKDPTKLVRKAGEQLAAFGDLRDDGSTSSGCW
                     IYIGAWGPTGNMMARRDNSDPTGIGNTLGWAWAWPANRRVMYNRASCDVAGQPFDPRR
                     TLLAWNGKNWGSVDVPDFKADEDPAGGMGPFIMNPEGIARFFAKAGMAEGPFPEHYEP
                     FDTPLRSNPLSPGQAQTLNNPAARVFASDRAQIGSPDEFPHVATTYRLTEHFHFWTKH
                     GKLNAIIQPEQFVEIGAALADELGINNGSRVRVSSKRGHIEAVAMVTKRIKALQIDGK
                     TVHQVGIPIHWGFLGAAKPGYIANTLTNAIGDGNSQTPESKCILVKVEKV"
     gene            4980..5645
                     /gene="gmk"
                     /locus_tag="QEL58_003194"
     CDS             4980..5645
                     /gene="gmk"
                     /locus_tag="QEL58_003194"
                     /EC_number="2.7.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="guanylate kinase"
                     /protein_id="HDS1677630.1"
                     /translation="MSAPSPSSDAVARGTLYIVAAPSGAGKSSIVNATLARDPQIALS
                     ISFTSRAMRPGEVNGQHYHFVSAEKFEQMIAAGDFFEHAWVHGDWKGTARQSVEPQLA
                     AGQDVLLEIDWQGAQQVRQLVPGTVTVFILPPSKQALQDRMRKRGQDSEAVIAQRLGA
                     ARDEMLHFNEFDYVIVNEVFDTAVDELCAIFTASRLRREAQKVRHAGLIQALLTPDPG
                     ATD"
     gene            5756..6055
                     /gene="rpoZ"
                     /locus_tag="QEL58_003195"
     CDS             5756..6055
                     /gene="rpoZ"
                     /locus_tag="QEL58_003195"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002812428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit omega"
                     /protein_id="HDS1677631.1"
                     /translation="MARITVEDCLEVVNNRFELVMMASKRARQLANGVQATLDNSETE
                     DKPTVLALREIAARKIDNALIDEVEKAERERAEREALEWAAAEVVADEDMSKNDD"
     gene            6161..>8318
                     /locus_tag="QEL58_003196"
     CDS             6161..>8318
                     /locus_tag="QEL58_003196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011269543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional (p)ppGpp
                     synthetase/guanosine-3',5'-bis(diphosphate)
                     3'-pyrophosphohydrolase"
                     /protein_id="HDS1677632.1"
                     /translation="MNPGPTAKVAAAATAAVPDYVLQLERAAHYLPPEQLPLLRRAWE
                     VGSAAHAGQTRKSGEPYITHPVAVAQVLAELGLDVEALIAAILHDTIEDTPLTREELA
                     SEFGEAVAELVDGVTKLDKLKFRDRQEAAAESFRKMLLAMSRDLRVIMIKLADRLHNM
                     RTLGAQSREARGRIARETLEIYAPIAQRLGMSLVKSELQNLGFKALYPWRHAIIEKHI
                     RSQPVVRREAMAQVEVQLSQRLAKEGIEHRLISRIKTPWSIYNKMRDENKSFDQVMDV
                     FGFRLVVRSVPSCYHALGSVHATFKPLDGRFRDFIAIPKANGYQSLHTVLFGPYGSPI
                     EVQIRTEEMDLIAERGVAAHWTYKFGGDSPNSAQSRAHAWIVELIDSQRAAGASLEFL
                     DNVKVDLFPDEVYLFTPKGKILALPRNSTALDFAYAVHTDVGNMAVASRVDKKLVPLR
                     TKLVSGQSVEIITARSATPKPQWLEFVVTSKARTAIRHQLKQLEHEDAVQLGHRMLDR
                     ALEAMDSSLERLPKGRLDAFLAEHRFPRLEALLAEVALGNWMPTQAAQALMAYAELRG
                     GPHSRHHSQEKILINGSERGVVTFAGCCQPIPGDEIMGYHTAGKGIVVHRMDCPNLAE
                     LRKSPERWVPIGWDTTVSGDYDTSLVVEVENGTGVLAQLAAAIAQSHSNIERVDYLDR
                     DFNAAVLAFNIQVRDRNHLAEVMRRLRRLSVVQSVRR"
BASE COUNT         1391 a         2741 c         2700 g         1486 t
ORIGIN      
        1 gacgttgacg ttgattctgc gggtgcaggg ccgcaggccc tgccgctacc cctcttcccg
       61 ccgcccgcgc aggatgtccc ggaaccactg ccgatggtgc ttgtacgccc acccataggt
      121 caccttgccc tgggtcatcg cccgcaccga acccttgatc cagatcgccg catagatatg
      181 caccacgatc gcgcagacca gtacccagcc gaacagcgca tgggccagca ccgagaagcg
      241 gatcaccccg atcgggaaga agtggctgaa gtactgtcgc cagatcacga agccggtcag
      301 cagcagcgcc gacaggcaac cgatgatggc ccagaacaac aacttctggc cggcattgaa
      361 gcggcccacc ggcggcagct tctcgtcctc gttgcgcagc acatcgcgca tgccgcgcat
      421 ccacgcgcgg tcatcggcgc tgaggaagtt gtcacgccac atccgcagcg ccagcagggc
      481 aaagccgatc accatggcca ggccgatgaa cgggtgcagg atgcgcgtcc acggcccgcc
      541 gccgaacagc tgggtcaacg gaaacagggc agggtggaac agcgccagcc cggacagcgc
      601 ggtcagcacg aaacagatcg ccacgatcca gtggttgatg cgggtcggcg cgcggtagcg
      661 gatgatctgc cgcgggtgcg gtgcgtactt catggccgct gctcctcttc gatcttcttc
      721 gcctcgtgtt cggcctcttc ctcttcctcg tcgttcaccg tgttgcggcc gatgccgatg
      781 taatgcagga agccgacaaa cgcggtagcg gcgatggcca gcacgcccag cggcttggcc
      841 acgcccttcc acacctccac catcgggctg atgcgcgggt ctttgggcag gtcggcgtac
      901 agttcgggct tgtcgacgtg ctgcagcacg tacatcacgt gggtgccgcc gacgccctgc
      961 gggtcataca ggccggcgtt ctcgtagccg cgtgatttca ggtcctccac gcggccggcc
     1021 gcatgctcgg tcatcgcctg cttgctgccg aaggtgatcg caccggtcgg gcaggtcttc
     1081 acgcaggccg gctcctggcc caccgccacg cggtccgaac acagcgtgca cttgtaggcc
     1141 ttgtggtcct tcttggaaat gcgcgggacg tcgaacgggc agccggtgac gcagtagccg
     1201 cagccgatgc agttctcttc ctggaaatcg acgatgccgt tggcgtactg gatgatcgcg
     1261 cccggcgacg ggcaggcctt caggcaaccc ggatcgctgc agtgcatgca gccttccttg
     1321 cggatcagcc attccagctt gcccttctcg tcctcgtact cgcggaactt catcaccgtc
     1381 cacgactgtt cactcaggtc gggcgggttg tcatagctgc cgacgcagct gccgacctcg
     1441 tcgcgcaggt cgttccactc catgcaggcg acctggcagg ccttgcagcc gatgcacttg
     1501 ctcacgtcga tcagcttggc gacctggccg gtgtgcgcac cacgcgcctc cggcgagggc
     1561 gtggtggtgg ccgagcggcg gatgatgtcc agcgattgca gtgacatgac gtgtctccta
     1621 caccttctcg accttgacca ggatgcactt cgactcgggc gtctgcgagt tgccgtcacc
     1681 gatggcgttg gtcagcgtat tggcgatgta gccgggcttg gccgcaccga ggaagcccca
     1741 gtggatcggt atgcccacct ggtgcacggt ctttccatcg atctgcaggg ctttgatgcg
     1801 cttggtcacc atcgcgacgg cttcgatatg gccgcgcttg gaactcacgc gcacgcggct
     1861 gccgttgttg atgcccagct cgtcggccag cgccgcgccg atctcgacga actgctcggg
     1921 ctggatgatg gcgttgagct tgccgtgctt ggtccagaag tggaaatgct cggtcaggcg
     1981 gtaggtggtg gccacatgcg ggaactcgtc cggcgagccg atctgcgcac ggtcgctggc
     2041 aaacacgcgc gcggccgggt tgttcagcgt ctgcgcctgg ccggggctga gcgggttgct
     2101 gcgcagcggt gtatcgaacg gctcgtaatg ctcggggaac gggccctcgg ccatgccggc
     2161 cttggcgaag aagcgggcga tgccttcggg gttcatgatg aacggtccca tgccgccggc
     2221 cggatcttcg tcggccttga agtcgggtac gtccacgctg ccccagttct tgccgttcca
     2281 cgccagcagc gtgcgtcgcg ggtcgaatgg ctggccggcc acatcgcacg aggcgcggtt
     2341 gtacatcacg cggcggttgg ccggccacgc ccaggcccag cccagcgtat tgccgatgcc
     2401 ggtcgggtcg ctgttgtcac gccgcgccat catgttgccg gtcgggcccc aggcgccgat
     2461 gtagatccag cagcccgatg aggtgctgcc atcgtcgcgc aggtcgccga acgcggccag
     2521 ctgctcgccg gccttgcgca ccagcttggt cgggtccttg ggatcgaaca cgtccgccag
     2581 cgccttgccg ttgtattcca tcgccagttc ttccggcgtc ggcacctccg ggttggaata
     2641 cttccaggcc agatcgcgca ccggctccca ccatgcgccg ccgtccttct cgtacatcgc
     2701 tttgatgcga tggaacagct cggacatgat ctcgatgtcg ctgcgcgctt cgcccggtgg
     2761 attggcgccc ttccagtgcc actgcagcca gcgcgaggag ttcaccaccg cgccgttctc
     2821 ctcggcgaaa gaggtggtcg gcaggcggaa cacttcggtc tggatggcgc ggggatcgac
     2881 gtcgttcagc gcgccatggt tctgccagaa cgcaatcgtc tcggtttcca gcgggtccat
     2941 gctgaccatg aacttcagct tggagaacgc gctgatcagc ttgcccttgt tcggcgccga
     3001 ggccagcggg ttgaagccct ggcagatgta gccgtggatc ttgccttcgt tcatcagctc
     3061 gtacgcctgc agcatgtcgt acggcttgtc gagcttgggc aggtaatcga agcaccagtt
     3121 gttgtcggcg gtggcggcgt cgccccacca cgatttcatc aggctgacgt ggaacttcgg
     3181 atagttctgc cagaacgaca tctggttggc gcgcagcggc ttctgtgtgc gcttggcgat
     3241 gtaggcgtcg tagtcctgtt cgtcctgttt cggcaacgtc aggtagccgg gcagcaggtc
     3301 ggacatcagg ccgatgtcgg tcaggccctg gatgttggag tgtccgcgca gcgcgttcat
     3361 gccgccgccg gccacgccga tgttgcccag cagcagctgc accatggtgc cggcacgcac
     3421 gttctgcgcg cccaccgagt gctgcgtcca gcccagcgcg tacaggatgg tcatcgcctt
     3481 gtccttgccg gcggtggacg cgatcatgtc ccagacctgg cggatgctgt cggccggcgt
     3541 accgcagatg cgttcgacca tctccacggt gtagcgcgcg tagtgctgct tgagcagggt
     3601 gtagacgcag cgggggtcct tcagcgtcgg gtcgctgcgc acgaagccgt catcaccata
     3661 gacgtagtcc cagctggaac ggtcgtagct gcgcttctct tcgttgtagc ccgaatacag
     3721 gccatccttg aaggcgaatt cgtccttcac caggaacgac atgtcggtgt agttcagcac
     3781 gtactcgtgc tggatgcggt cctcggtcaa caggtagttg atcaggccgc ccaggaacac
     3841 gatgtcggtg ccggtacgga tcggcgcata cacgtcggcc accgcggccg agcggttgaa
     3901 gcgcgggtcg accacgatca ggcgggcctt gttgtgtgcc ttggcttcgg tcacccattt
     3961 gaagccgcac gggtgcgcct cggcggcatt gccacccatg atcaggatca ggtcggcatt
     4021 cttgatgtcg acccaatgat tcgtcatcgc accacggcct agcgtcgggg caagacctgc
     4081 caccgtcggg ccgtgtcaga cacgtgcctg gttgtcgaat gccagcatgc cgagggagcg
     4141 cacgaccttg tgggtcagca ccgcggtttc attgctggtg gccgaggccg ccagcatgcc
     4201 ggtggtcagc cagcggttga ccgtctgccc ggcctcgttc ttctctacga agttggcgtc
     4261 gcggtcttcc ttcatcagcc gcgcgatgcg gtccagcgca tcgtcccagc tcagccgctt
     4321 ccactcgttc gagcccggtg cgcggtactc ggggtagagc aggcgcgact tgctgtggat
     4381 gatgtcggcc aggccggcac ccttcgggca cagcgtgccg cggttgaccg gatggtccgg
     4441 gtcgccttcg atatggaaga tgctcggctc ggcgttcttg gcaccatcgc cgaggctgta
     4501 catcaggatg ccgcaggcca ccgaacagta cgtacaggtg ttgcgggtct cggtcgcgcg
     4561 ggtcagcttg tactgccgga cctccgcgag tgcgatgccg ggcgcgaagc ccatcaatgc
     4621 caggctggag cccaccaggg ttgtcccggt gaccttcagg aactggcggc gactcatcga
     4681 gggcatgccg ttctccttgg atggcggggc ggcacgcaga ccacccggct gtcggtaggt
     4741 acggcccggt tatagcacag gcccccggat gcccatgtgg cacaaggtcc ggccgcctcg
     4801 ccaaggggcg cgaaaagggg cggctctggt aaagttgcgt gcccgcaccc cggggagccg
     4861 tctgccgggc ctggttccag gatgttccgt gcagcctccg ccgtcctggc gcgatcctcc
     4921 gcgccggatc tggaacatcg aggaaaaatt ttgcgaaatc aaccagttgg gttccgtgca
     4981 tgagcgcccc gtcaccttcg tcggacgccg tcgcgcgcgg cacgctgtac atcgttgctg
     5041 ccccttccgg cgccggcaag agcagcatcg tcaacgccac gctggcgcgt gatccgcaga
     5101 tcgccctgtc gatttccttc acctcgcgtg cgatgcgccc gggtgaagtg aacggccagc
     5161 actaccattt tgtcagtgcc gaaaagttcg agcagatgat cgccgccggc gatttcttcg
     5221 agcatgcctg ggtgcacggc gactggaagg gcaccgcccg gcagtcggtg gaaccgcagc
     5281 tggccgccgg ccaggacgtg ctgctggaga tcgactggca gggcgcgcag caggtgcgcc
     5341 agctggtgcc gggcacggtc accgtgttca tcctgccgcc gtccaagcag gcgttgcagg
     5401 accgcatgcg caagcggggc caggacagcg aggcggtcat cgcccagcgc ctgggcgcgg
     5461 cgcgtgacga gatgctgcac ttcaacgagt tcgactacgt gatcgtcaac gaggtgttcg
     5521 acaccgccgt cgacgagctg tgcgccatct tcaccgccag ccgcctgcgc cgggaggccc
     5581 agaaggtccg ccacgccggc ctgatccagg ccctgttgac ccccgatccg ggcgcaactg
     5641 actgattcca aaagaatagg gtgggggttg gcttgatttt gtccagcccc tgccagtaca
     5701 ctccgtcccc tttccctcat tcgactgagc ggccgaccgg tcgccgggag cccgtatggc
     5761 ccgcatcacc gtagaagatt gcctggaagt cgttaacaac cgtttcgaac tggtcatgat
     5821 ggcttccaag cgtgcccgcc agctcgccaa cggcgtgcag gccacgctgg acaacagcga
     5881 gaccgaggac aagccgaccg tgctggcgct gcgcgaaatc gccgcccgca agatcgacaa
     5941 cgcgctgatc gacgaagtcg agaaggccga gcgtgagcgc gccgagcgcg aagcgctgga
     6001 gtgggccgcc gccgaagtgg tcgccgacga agacatgtcc aagaacgacg attgatcaca
     6061 tcgatcagag tcattgctgg atagccgaac agcccgcccc gcgcgggctg tttcgcattc
     6121 aggatttgcc gtaaacgtcg cgctggaata ggcttcgggc atgaacccag gccccactgc
     6181 caaggtcgcc gcagccgcca ctgccgccgt acccgactac gtcctccagc ttgaacgcgc
     6241 cgcccattac ctgccgccgg agcagctgcc gctgctgcgc cgtgcctggg aagtcggatc
     6301 cgccgcgcac gctgggcaga cgcgcaagtc gggcgagccc tatatcaccc atccggtggc
     6361 cgtggcccag gtgctggccg agctgggcct ggacgtggaa gcgctgatcg ccgcgatcct
     6421 gcacgacacc atcgaagaca ccccgctgac ccgcgaggaa ctggcctcgg agttcggcga
     6481 agccgtggcc gaactggtcg acggcgtgac caagctggac aagctgaagt tccgcgaccg
     6541 ccaggaagcg gctgccgaga gcttccgcaa gatgctgctg gcgatgtcgc gcgacctgcg
     6601 cgtgatcatg atcaagctgg ccgaccgcct gcacaacatg cgcacgctgg gtgcgcagag
     6661 ccgcgaggcg cgtggccgca tcgcccgcga gacgctggag atctacgcac ccattgccca
     6721 gcggctgggc atgagcctgg tcaagagcga actgcagaac ctcgggttca aggcgctgta
     6781 tccgtggcgc cacgcgatca tcgaaaaaca catccgcagc cagccggtgg tgcgccgcga
     6841 agcgatggcg caggtggaag tgcagttgtc gcagcgcctg gccaaggaag ggatcgagca
     6901 tcggctgatc agccgcatca agaccccgtg gagcatctac aacaagatgc gcgacgagaa
     6961 caaatccttc gaccaggtga tggacgtgtt cggcttccgc ctggtcgtgc gcagcgtgcc
     7021 cagctgttac cacgcgctgg gttcggtgca tgccaccttc aagccgctgg atggccgctt
     7081 ccgcgatttc atcgccattc ccaaggccaa cggttaccag tcgctgcata ccgtgctgtt
     7141 cgggccctac ggttcgccga tcgaagtgca gatccgcacc gaagagatgg acctgatcgc
     7201 cgaacgcggc gtggccgcgc actggaccta caagttcggc ggtgattcgc ccaacagcgc
     7261 gcagagccgt gcgcatgcct ggatcgtcga gctgatcgat tcgcagcgcg ccgccggggc
     7321 ctcgctggaa ttcctcgaca acgtcaaagt cgacctgttc ccggacgagg tctacctgtt
     7381 caccccgaag ggcaagatcc tggccctgcc gcgcaactcc accgcgctcg atttcgccta
     7441 tgccgtgcat accgacgtcg gcaacatggc ggtggcctcg cgggtggaca agaagctggt
     7501 gccgctgcgc accaagctgg tgtcgggcca gtcggtggaa atcatcaccg cgcgctcggc
     7561 cacgccgaaa ccgcagtggc tggagttcgt ggtcaccagc aaggcacgca ccgccatccg
     7621 ccaccagctc aagcagctgg aacacgaaga tgccgtgcag ctgggccatc gcatgctcga
     7681 ccgcgcgctg gaagccatgg attcctcgct ggagcggctg ccgaaagggc gcctggacgc
     7741 gttcctggcc gagcaccgct tcccgcgcct ggaggccctg ctggccgaag tcgcgctggg
     7801 caactggatg ccgacccagg ccgcacaggc actgatggcc tacgccgaac tgcgcggtgg
     7861 cccgcattcg cgccaccact cgcaggaaaa gatcctgatc aacggcagcg aacgcggcgt
     7921 ggtcaccttc gccggctgct gccagccgat tcccggcgac gagatcatgg gctaccacac
     7981 cgccggcaag ggcatcgtgg tgcaccgcat ggactgcccg aacctggccg aactgcgcaa
     8041 gtcgcccgag cgctgggtgc cgatcggctg ggacaccacg gtctccggcg actacgatac
     8101 ttcgctggtg gtggaagtgg agaacggcac cggcgtgctg gcgcagctgg cggccgcgat
     8161 cgcccagagc cactccaaca tcgagcgcgt ggactacctg gaccgcgact tcaatgccgc
     8221 cgtgctggcg tttaacatcc aggtgcgcga ccgcaaccac ctggccgaag tgatgcgccg
     8281 cctgcgccgc ctgtcggtcg tgcagtcggt acgccgcc
//
LOCUS       DAOKIP010000178         8170 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.178,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000178 DAOKIP010000000
VERSION     DAOKIP010000178.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 8170)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8170)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8170
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.178"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..1271)
                     /gene="ptsJ"
                     /locus_tag="QEL58_003197"
     CDS             complement(<1..1271)
                     /gene="ptsJ"
                     /locus_tag="QEL58_003197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator PtsJ"
                     /protein_id="HDS1677633.1"
                     /translation="MKITGHSAESIFDSIRDGIGKGRLPAGTVLPAVRELAEQLGVNR
                     NTVAAAYKRLDAAGLASTAGRRGTVVRGLPSAMAREGSTPGVALHDLASGNPDPRLLP
                     NLRLAPAAPRLYGVGTVDPRLQALARASLDADCPEGYALELTHGAVDGIERLLAAWLL
                     PGDRIAVEDPCFLGSLNVLNAVGHAPLPVVVDAHGMQVESLRAALEAGARAVLLTPRA
                     HNPTGASLDAKRARALRQLLAHYPQVAVLIDDHYALLSQQTYHSVLPLDGRRWALLRS
                     LSKPLGPDLRLAWLGCDEETAARLRLRLASGTGWVSHLLQDAATSVLGSASQRAKIAS
                     AGERYQQRLQSLQELLVARGVATPQPMEGLNLWLPLPADSHPQVLALAARGWHVRAGE
                     VFAVAAPGHGLRITCAALGPVQQRQLADDLAA"
     gene            1348..2121
                     /locus_tag="QEL58_003198"
     CDS             1348..2121
                     /locus_tag="QEL58_003198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggS family pyridoxal phosphate-dependent
                     enzyme"
                     /protein_id="HDS1677634.1"
                     /translation="MPLAAADWPMAQSVEQIAANLATVRQRIADACARAGRDPASVRL
                     LPVSKTVDDARIRMAVAAGCHELGENKVQEAQRKAEAMADLGVHWSVIGHLQTNKARY
                     VARFASEFQALDSLRVAEALQQRLQVEDRTLEVFVQVNTSAEPSKYGLEPGAVEGFVQ
                     QLPAFDRLRVRGLMTLAVFTPDVERVRACFVRLRELRDQLQCSAPAGLDLSQLSMGMS
                     GDFEVAIEEGATVVRVGQAIFGARATPDSFYWPHSGAPA"
     gene            2118..2819
                     /locus_tag="QEL58_003199"
     CDS             2118..2819
                     /locus_tag="QEL58_003199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine amidotransferase"
                     /protein_id="HDS1677635.1"
                     /translation="MKHAVVLQHVAFEDLGTLTPLLLAQGWQLQVLQAGVDPLDDAEA
                     AELLVVLGGPISANDTETYPFVTDSIALLRRRLQQQRPTLGICLGAQLMARALGASVV
                     ASGGKEIGFAPLLLTDDGQRSPLQALQGIPVLHWHGEGFELPPGARRLASTPACRHQA
                     FAIGQHALGLQCHPELDARQFERWLIGHTLELAQAGIDPNDLRAQARRYGAPLAAAAT
                     AMFDHWLQDLPEMPR"
     gene            2816..3040
                     /locus_tag="QEL58_003200"
     CDS             2816..3040
                     /locus_tag="QEL58_003200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010485009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677636.1"
                     /translation="MNYRLQVYRDGAYWGHFDCSGPDALLRMDVIAARLPSEQGFQLK
                     RQKGIGEERILSSNADGLRVLAAQIQYRDL"
     gene            3190..3699
                     /locus_tag="QEL58_003201"
     CDS             3190..3699
                     /locus_tag="QEL58_003201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005413794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HDS1677637.1"
                     /translation="MSTPVEPTDVAQLCAAHYRPLHAHVRRKLPQRSDADDVVQETWL
                     RIVKVAASGLLNNGRAYLYRVAHNLIADHYRQRQRRREEALDDTQLHAIADPAPLPDQ
                     RLLDAEQLRHLDAIIAALPPRSRQVFLLARVEQMALAEIGRQLGISRQTAHGHLLRAL
                     VALQQVPGP"
     gene            3696..4622
                     /locus_tag="QEL58_003202"
     CDS             3696..4622
                     /locus_tag="QEL58_003202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010485002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FecR domain-containing protein"
                     /protein_id="HDS1677638.1"
                     /translation="MSQDTIAREAARWWLDGHDGERDENAFNQWCQADPRHALQYQHL
                     QQLWQAGAATPSLQRQQQRRRRRHLGEAGIAVLLLCALGLYGRPAPPPAAQVLRTAAG
                     EIRDEALPDGSHVLLSPGSEVHVRVDGQHRQLQLQRGQAWFKVAADARRPFQVHTPHG
                     TVTALGTAFDLVVQGNSSRVTVTEHRIRVEDGSGTVQAAEGQQVRFNGQSPPAAQPAD
                     SGGLAWRERRLHWVSAPLADVTEGLDRWHGGHTWIIGARLRQQPVTLLGSADGAASNR
                     DQLAAQLHVRVLRLGAGVQVWLPPRREHADAP"
     gene            4687..7158
                     /locus_tag="QEL58_003203"
     CDS             4687..7158
                     /locus_tag="QEL58_003203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012511402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDS1677639.1"
                     /translation="MLCHRPLVLALSLASASTVPLLPSSAHAQVATRTYDLPAQPLAA
                     ALDAYSRLTGVDLVIGAALPAGHPAPALRGDFDDAQALSRLLAGSGLRPRFIDARRAT
                     LEPAPAERSDGSRRTGPLRVQGDTAHGQAPGTGASQYVPATRDGFAPAVGSERVAMAE
                     RQDGNSLLRSMPGTHSFHSRSQPGLQVNIRGMTGAGRVNTMIDGVTQTFRNNAGHGSG
                     GPFAYVDPFLLAGVDVQRGAVAGGDGAGTLAGSANFRTLDIDDLLGEGRDWGLRAGYR
                     HGNNGYGSGRTFAGAWRHSEDGGDRQFGLLAAASSSRSGEYATARGQTNKADPGSQQP
                     SSWLLKARLQPSDQHRLDLSHMRYENDFYHNYPWQISARNQRASYHYTPYSPWVDLRA
                     TFASNKTRLFYPPVEDSSYIGRRTHSSLSSWTLDNTSRFDIGALQARWNTGIKHQSDI
                     FVADTPTLRGANPQGRSQLDSVFSTLELQYDIYALTAGLRQDRYGIRGHIPGCSEVPG
                     QCAEINGGNIDVRRTERALSPSLAVSLQATDWLQLFAEVSRTSRPPRVQEMFFEKIPL
                     EGMSDADGVGANPFLRRERSRNLQFGANLSTDSLLVDGDLAQLRITRFDNRIRDYIKP
                     QYLLIVHPPEVAPFVVPIDSDPQLNAWTDTLDADDFSTTTRWMNHQGIVRMRGIELEA
                     HYASEHYHATLSWTRSQTSAPAIEFVNLEDITALPDRYWTLDVGGRWWQQRVQAGLRA
                     EYSGPTEEGYDFFQTRKTGGTGVLLDFYASFKPQPNTTLWLNIENLQNKAYDNNASID
                     SIFSPILDRGNGRGRTVSMGVNVAF"
     gene            7145..7945
                     /locus_tag="QEL58_003204"
     CDS             7145..7945
                     /locus_tag="QEL58_003204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ChaN family lipoprotein"
                     /protein_id="HDS1677640.1"
                     /translation="MWRSSRRWLLLCLLALTSLASAQPMPGKVIDLASGQPLDESMFI
                     QRAAGAQRLLLGERHDLAGDHAAQRWLLQALHQQRPQGALVMEMIASERQPRLQRVQR
                     WLAKGNHTDGSRLQELLDWDARWPWAAYGGLVQDAAAAGIALVGGNLSRAEVNSLLAS
                     TEPVAFPVAAARQRLSAVVLAQHADAAPMLDGMLAVQYARDRRMAQVLTDASAPALLV
                     AGRWHVLRGTGVPGHLPPGTPALVIVLASPGEQVDATDADLLWVLGDD"
     gene            7938..>8170
                     /locus_tag="QEL58_003205"
     CDS             7938..>8170
                     /locus_tag="QEL58_003205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012511404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HDS1677641.1"
                     /translation="MTERGHHWQAVVISIGLHLLPLLLLVHWVATPPALPPPEQDVRI
                     SLRLLAPATPPQPIEERQADTPSQAQQARASQPT"
BASE COUNT         1317 a         3019 c         2625 g         1209 t
ORIGIN      
        1 gccgccagat catcggccag ctgccgctgc tgcaccggtc ccagcgccgc gcaggtgatg
       61 cgcaggccat gcccgggggc cgccaccgcg aacacttcgc ccgcgcgcac atgccagcca
      121 cgcgcggcca gcgccagcac ctgcggatga ctgtcggccg gcaagggcag ccacaggttc
      181 agcccttcca tcggctgcgg cgtcgccacg ccacgtgcaa cgagcaattc ctgcagcgac
      241 tgcaggcgct gctggtaacg ctcgcctgcc gacgcgatct tcgcccgctg cgacgccgag
      301 cccagcaccg aggtggccgc gtcctgcaga agatgactga cccagcccgt gcccgaggcc
      361 aaccgcagcc gcaaccgcgc cgcagtttcc tcatcacagc ccaaccaggc cagccgaagg
      421 tcagggccaa gcggcttgga cagcgagcgc aacagcgccc agcgccggcc atcgagcggc
      481 agtaccgagt gataggtctg ctgcgagagc agcgcgtagt gatcgtcgat cagcactgcc
      541 acctgcggat agtgggcaag cagctgccgc agcgcccgtg cgcgcttcgc atccaggctg
      601 gccccggtcg gattgtgcgc acgcggggtc agcagcaccg cgcgtgcgcc ggcctccagt
      661 gcggcacgca gcgattcgac ctgcatgcca tgcgcatcca ccaccaccgg caagggcgca
      721 tggcccaccg cgttgagtac gttgaggctg ccgaggaaac atggatcttc caccgcgatg
      781 cgatcacccg gcagcagcca cgccgccagc aggcgctcga tgccatcgac cgcgccatgg
      841 gtcagctcca gcgcataccc ctcggggcaa tccgcatcca gcgaggcccg tgccagcgcc
      901 tgcaaccgcg ggtcgaccgt gcccacccca tacaaccgtg gcgccgccgg agccagtcgc
      961 aggttcggca gcaggcgcgg gtccgggttg ccactggcca ggtcatgcag ggccactccc
     1021 ggcgtgcttc cttcgcgtgc cattgccgac ggcaagccgc gcaccaccgt gccgcgacgg
     1081 ccggcagtgc tggccaggcc cgccgcgtcc agccgcttgt aggctgcggc cacggtgttg
     1141 cggttcaccc ccagctgctc ggccagctca cgcaccgccg gcagcacggt gccggccggc
     1201 aggcggccct tgccgatgcc gtcgcggatg ctgtcgaaga tcgactcggc gctatgcccg
     1261 gtgattttca ttttgtccta tgccaaaata actcttgtcc tgtgccagtg tatcccaccc
     1321 tggccattcc gcattggagg tgcccgcatg ccccttgccg ccgccgactg gcccatggcc
     1381 cagtctgttg aacagatcgc cgccaacctg gccaccgtgc gccagcgcat cgccgacgcc
     1441 tgcgcccgcg ctggccgtga tccggccagc gtgcgcctgc tgccggtcag caagaccgtc
     1501 gatgacgccc gcatccgcat ggccgtggcc gctggttgcc acgaactggg cgagaacaag
     1561 gtccaggagg cacagcgcaa ggccgaggcc atggccgacc tgggcgtgca ctggtcggtg
     1621 atcggccacc tgcagaccaa caaggcgcgc tacgtggcgc gcttcgccag cgagttccag
     1681 gcgctggaca gcctgcgcgt ggccgaggcc ctgcagcagc gcctgcaagt ggaagatcgc
     1741 acgctggagg tgttcgtgca ggtcaatacc tcggccgagc ccagcaagta cggactcgag
     1801 cccggcgcgg tggagggctt cgtgcagcag ctgccggcct tcgatcgtct gcgcgtgcgc
     1861 ggcctgatga ccctggccgt gttcaccccg gatgtcgagc gcgtgcgcgc ctgcttcgtg
     1921 cgcctgcgcg aactgcgcga ccagctgcag tgctctgcgc ccgccggcct cgacctctcg
     1981 cagctgtcga tgggcatgtc cggtgacttc gaagtcgcca tcgaggaagg cgccaccgtg
     2041 gtccgcgtcg gccaggccat cttcggcgcc cgcgccaccc cggacagttt ctactggccc
     2101 cacagcggag caccggcatg aagcacgcgg tggtcctgca gcacgttgcc ttcgaggatc
     2161 tcggcaccct gacgccgctg ctgctggcgc agggctggca gctgcaggtg ctgcaggccg
     2221 gtgtcgaccc gctcgacgat gccgaagcgg ccgagctgct ggtcgtgctg ggtggcccga
     2281 tcagtgccaa cgacacagaa acctatccct tcgtcaccga cagcatcgcc ctgctgcggc
     2341 gtcgcctgca gcagcagcgg ccaaccctcg gcatctgcct cggcgcgcag ctgatggcgc
     2401 gcgcgctcgg cgccagcgtc gttgccagtg gcggcaagga gatcggtttc gcgccactgc
     2461 tgctcaccga tgacggccag cgctcgcccc tgcaggccct gcagggcatt ccggtactgc
     2521 attggcacgg tgagggcttc gaactcccgc ccggcgcacg ccgcctggcc agcacgcccg
     2581 cctgccgcca ccaggcattt gccatcggtc agcacgcgct gggcctgcaa tgccatccgg
     2641 agctggacgc gcgccagttc gaacgctggc tgatcggcca caccctggaa ctggcccagg
     2701 ccggcatcga cccgaacgac ctgcgcgcgc aggcgcgccg ctatggtgcg ccgctggcag
     2761 ccgccgccac cgcgatgttc gaccactggc tgcaggacct gccggagatg ccacgatgaa
     2821 ttaccggttg caggtctacc gcgatggcgc ctactggggc cacttcgact gcagcggccc
     2881 cgacgccctg ctgcgcatgg acgtcatcgc cgcacggctg cccagcgaac agggcttcca
     2941 gctgaagcgg cagaaaggta tcggcgagga gcgcatcctg tccagcaacg ctgacggcct
     3001 gcgcgtgctc gccgcgcaga tccagtaccg cgatctttga cccgtttggg ggcatgccgg
     3061 ccaacggctg gcggtcccat tcactggctg atgaccgccc attgatgcaa atgattctct
     3121 tttgctgtaa ggtgctgccg ctgcccttgc cgccgcgggc tgttcccttt cccagttgtc
     3181 gcccgccccg tgtccacgcc tgtcgaaccg acggatgtcg cgcagctgtg cgcggcccat
     3241 taccggccgc tgcacgccca tgtccgccgc aaactcccgc aacgcagcga tgccgatgac
     3301 gtcgtccagg aaacctggct gcgtatcgtc aaggtcgccg ccagcggcct gctgaacaat
     3361 ggccgcgcct atctgtatcg cgttgcccac aacctgatcg ccgatcacta ccggcagcgc
     3421 cagcgccggc gcgaagaggc gctggacgac acccagctgc atgccatcgc cgatcccgca
     3481 ccgctaccgg accagcgcct gctcgacgcc gaacagctgc gtcatctcga tgcgatcatc
     3541 gccgcgctgc caccgcgctc gcgccaggta ttcctgctcg cccgtgtcga gcagatggcc
     3601 ctggccgaga tcgggcgcca gctcggcatc agccgtcaaa ccgcgcatgg ccatctgctg
     3661 cgcgccctgg tcgccctgca gcaggtacct ggcccatgag ccaggacacc atcgcacgcg
     3721 aagccgcccg ctggtggctg gatgggcacg acggcgaacg cgatgagaac gcgttcaacc
     3781 aatggtgcca ggccgacccg cgccatgccc tgcagtacca gcacctgcag cagctgtggc
     3841 aggccggtgc cgccaccccc agccttcaac gccagcagca acgccggcgc cgccgccacc
     3901 tgggtgaagc cggtattgcg gtgctgctgc tgtgcgcgct tggactgtat ggccgccctg
     3961 ccccgccgcc ggccgcgcag gtgctgcgca ccgccgctgg cgaaatccgc gacgaagcgc
     4021 tgccggacgg ttcgcatgtc ctgctgtcac caggcagcga agtgcatgtg cgcgttgatg
     4081 ggcaacatcg ccagttgcag ctgcaacgcg gccaggcctg gttcaaggtc gctgccgacg
     4141 cccgccggcc gttccaggtg catacgccgc atggcacggt cactgcgctg ggtactgcct
     4201 tcgacctcgt cgtgcagggc aacagcagca gggtcacggt caccgaacat cgcatccggg
     4261 tagaggacgg cagcgggacc gtgcaggcgg ccgaggggca acaggtacgc ttcaacggac
     4321 agtcaccgcc tgccgcccag ccggcagaca gcggcggcct cgcctggcgc gaacgacgcc
     4381 tgcactgggt ctcggccccc ctcgccgatg tcaccgaagg cctggaccgc tggcacggcg
     4441 ggcacacctg gatcatcggc gcgcgcctgc gccagcaacc ggtcaccctg ctgggcagtg
     4501 ccgacggcgc agccagcaac cgcgatcaac tggccgcgca gctgcacgtg cgcgtgctgc
     4561 gcctgggcgc gggcgtgcag gtctggttgc cgccgcgcag ggaacatgct gatgcgccct
     4621 gacatcgggc ctgcggctgc gtctacccag gatgacgacg ctctgcgtca gcccctggag
     4681 tcttcgatgc tgtgccaccg cccccttgtt cttgccctgt cgctggccag tgccagcacg
     4741 gttccgctgt tgccctccag cgcccacgcg caggtggcca cccgcaccta tgatctgccc
     4801 gcgcagccgc tggccgccgc gctggatgcg tacagccgcc tgaccggcgt cgacctggtg
     4861 atcggcgcgg cattgcccgc cggccatcct gcaccagccc tgcgcggtga cttcgatgac
     4921 gcacaggcgc tgtcacgcct gctggccggc agtggcctgc gcccacgctt catcgatgca
     4981 cgtcgcgcca ccctggagcc ggcgcccgcc gaacgcagcg acggcagccg ccgcaccggg
     5041 ccgctgcgcg ttcagggcga caccgcgcat ggccaggcgc caggcaccgg cgccagccag
     5101 tacgtgcccg ccacccgcga tggcttcgct cccgctgtag gcagtgagcg ggtggcgatg
     5161 gccgagcgcc aggatggcaa cagcctgctg cgctcgatgc ccggaaccca cagcttccac
     5221 tcgcgcagcc agcccggcct gcaggtcaac atccgcggca tgaccggcgc cggccgggtc
     5281 aacaccatga tcgacggtgt cacccagacc ttccgcaaca acgccggcca tggatcgggt
     5341 ggcccgttcg catacgtcga tccgttcctg ctggccggcg tggacgtgca gcgcggggcg
     5401 gtcgccggtg gcgatggcgc cggtacgctg gccggcagcg ccaacttccg caccttggac
     5461 atcgacgatc tgcttggcga aggccgcgac tggggcctgc gtgcaggcta ccggcatggc
     5521 aacaacggct atggaagtgg ccgcaccttc gccggcgcat ggcgccacag cgaagacggt
     5581 ggcgaccgcc agttcggcct gctcgccgcc gccagcagca gccgcagcgg cgaatacgcg
     5641 acggcacgcg ggcagaccaa caaggccgac cctggcagcc agcagcccag cagctggctg
     5701 ctgaaagcgc gcctgcagcc cagcgaccag catcggctcg acctgagcca catgcgttac
     5761 gaaaacgact tctaccacaa ctacccgtgg cagatttccg cacgcaacca gcgcgccagc
     5821 taccactaca cgccctactc cccgtgggtc gacctgcgtg cgaccttcgc cagcaacaag
     5881 acccggctgt tctacccgcc ggtggaggac tccagctaca tcggccgccg tacccacagc
     5941 agcctgagca gctggaccct cgacaacacc agccgcttcg acatcggcgc gctgcaggcg
     6001 cgctggaaca ccggcatcaa gcaccagtcg gacatcttcg tggccgacac gcctaccctg
     6061 cgcggcgcca acccgcaggg gcgcagccag ctcgacagcg tgttcagcac gctggaactg
     6121 cagtacgaca tctatgcact gaccgccggc ctgcgccagg accgctacgg catccgtggc
     6181 catatccccg gctgttccga ggtgccgggc cagtgcgcgg agatcaacgg cggcaacatc
     6241 gatgtgcgcc gcaccgagcg tgcactcagc cccagcctgg cggtttctct gcaggcgacc
     6301 gactggctgc agctgttcgc cgaagtctcg cgcacctcgc ggccgccgcg ggtgcaggaa
     6361 atgttcttcg agaagattcc gctggagggc atgagcgatg ccgacggcgt aggcgccaat
     6421 ccgttcctgc gccgcgagcg ctcgcgcaac ctgcagttcg gcgccaacct cagcaccgac
     6481 tcgctgctgg tcgacggcga cctggcccag ctgcgcatca cccgcttcga caaccgcatc
     6541 cgcgactaca tcaagccgca gtacctgctg atcgtgcatc cgccggaagt ggcgccgttc
     6601 gtggtgccga tcgatagcga tccgcagctc aatgcctgga ccgatacgct ggatgccgac
     6661 gatttcagta ccaccacgcg ctggatgaac caccagggca tcgtgcgcat gcgcggcatc
     6721 gagctggagg cgcactacgc cagcgagcac taccacgcca ccctcagctg gacccgctcg
     6781 cagaccagcg cgccggccat cgagttcgtc aacctggaag acatcaccgc cctgcccgac
     6841 cgctactgga cgctggatgt gggcggccgc tggtggcagc agcgcgtgca ggccggcctg
     6901 cgcgccgagt actccggtcc caccgaggaa ggctacgact tcttccagac ccgcaagacc
     6961 ggcggcaccg gcgtgctgct ggacttctac gccagcttca agccccagcc caacaccacg
     7021 ctgtggctga acatcgaaaa cctgcagaac aaggcctatg acaacaatgc ctcgatcgac
     7081 agcatcttca gcccgatcct tgaccgcggc aacggccgcg gccgcaccgt ctcgatgggc
     7141 gtcaatgtgg cgttctagcc gccgttggct gctgctgtgc ctgcttgcgc tgacctccct
     7201 ggccagcgca cagccgatgc ccggcaaggt gatcgacctg gccagcggcc agccgctgga
     7261 cgagtccatg ttcatccagc gtgcggccgg cgcgcaacga ctgctgctgg gcgagcgtca
     7321 tgaccttgcg ggcgaccatg ccgcccagcg ctggttgctg caggcactgc accagcagcg
     7381 cccgcagggt gcgctggtga tggaaatgat cgccagcgaa cgccagcccc gcctccaacg
     7441 cgtgcagcgc tggctggcca agggcaatca caccgacggc tcacgcctgc aggaactgct
     7501 ggactgggac gcgcgctggc cgtgggccgc ctacggtggt ctggtgcagg acgccgcggc
     7561 tgcaggcatt gcgctggtcg gcggcaacct gtcgcgcgcc gaggtcaaca gcctgctggc
     7621 ctctacagaa ccggtagcat ttccggttgc tgcggctcgg caacggttgt cggcggtggt
     7681 gctggcacag catgcagacg cagcaccgat gctggacggg atgctggccg tacagtacgc
     7741 ccgcgatcgc cgcatggcac aggtactgac cgatgcgtcg gccccggcgc tgctggtcgc
     7801 cgggcgctgg catgtactgc gcggtaccgg cgtgccgggc catctgccac cgggtacccc
     7861 ggcgctggtg atcgtactgg cgtctccagg cgaacaggtc gatgccaccg atgccgacct
     7921 gctgtgggtg ctgggcgatg actgagcgtg gccaccactg gcaggccgtt gttatcagca
     7981 tcggcctgca cctgctgccc ttgctgctgc tggtgcactg ggtggccacg ccgcccgcac
     8041 tgccaccacc ggaacaggac gtacgcatca gcctgcgcct gctggcaccg gccacgccac
     8101 cgcaaccgat cgaggaacgc caggccgaca cgcccagcca ggcacagcag gcacgtgcat
     8161 cgcagccgac
//
LOCUS       DAOKIP010000179         8113 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.179,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000179 DAOKIP010000000
VERSION     DAOKIP010000179.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 8113)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8113)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8113
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.179"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(46..2964)
                     /locus_tag="QEL58_003206"
     CDS             complement(46..2964)
                     /locus_tag="QEL58_003206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010483992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDS1677642.1"
                     /translation="MFDSHRPGRVLRPSRLCIALLAAGLASAAPSVLAQSARGDHAAV
                     QRFDIPALPLDEALRSYMRQSGIQVVYPATLAQGVTSRAVNGSLSANDALQRLLQGSG
                     LAVRRVSADAVTLEAATPAQAGDGVIVTDTLSVAGDRVDAGATSDEARLLDSYRSVGS
                     TTTLNRTHLERFRGTSNGDIVKGVAGVTAGDPRVGNGFDVNIRGIQGQGRVPVIIDGG
                     QSSIDTYRGYAGQSQRTYLDPDLISSLTITKGPSLQANASGGIGGVVEMETLKIGDVL
                     REGRDFGVRVRGGLANASANNLPAYSAAPRTDRSATGNQFFNVAAAGHWDRFDLVAAY
                     AYRDTGNYFSGKHGYDDFPQTRRTLAPLNPPRTEVFNTSSRSKSALLKGTWRIDDAQT
                     LEAGYRRYEGTAGEIMASQIIRVDRDRIPQWDPGHVDMDSYTLRYRFNPDSELVDLRV
                     NATYTDTDSVMYNSLTGITPWYFDRRTEWYDAPSFSGDPGYKDAYRNPLRQKRFGLDA
                     SNTSRFDTQAGAFTLDYGLSYSDEDIAPGSSGPVMHDDLVNNRFLRNAERKEYSAVAS
                     LKWQPDEHWELLAGGRWNRVDVHDRNRLATPDAYEVQGQYRYTELLNGNPALPSWRAK
                     RIALLNWYPDANGNFTQESLLASPYKKGTVADIGGWNFYDAGKAQDLEVPVSWSWSQP
                     IRRRDSAFSPTASVAYRFSEDTMVYVKYAEGTKLPSLFETTLGLFTAAKPVGELKPER
                     ARSWEIGASTIRYDLFTAGDRLALKLAYFDTRIDDLITRDYRTLSAGLIRNVDRFKVS
                     GMEFQSSYDSGKLFADLSAHYYFKAKTCAPDIAAERRAYGEQRKNAELAGTPDCVDGG
                     FEGSYTNTQNPPRYMVNLTLGSRLFDERLTFGTRVVHNAGPISKLDKEWNVGLSAIQQ
                     LYRPTTLVDLFASWSFNDQLSVEAGVDNLTDRYYLDPLALGVMPAPGRTARLALTWKY
                     "
     gene            complement(3143..4075)
                     /locus_tag="QEL58_003207"
     CDS             complement(3143..4075)
                     /locus_tag="QEL58_003207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FecR domain-containing protein"
                     /protein_id="HDS1677643.1"
                     /translation="MSPPNMLPAANDDALAEQARGWIAWLASGDVGEARMHEFERWLA
                     QPGHRRAFEHERALWRSIGPRPQARPVQRPRPRRLRWAMAAAAALAMLVAWPEAWLRL
                     QADHRSTHVVQDVQLPDGSRAVLDADSAIAVHFDAHARQVELLRGRAWFDVTPDAERR
                     FSVRAGNGVVEDISTAFTVARGDGQVETQVGQGRVRVASPADGGWTYLQVGQRAVYGE
                     HSGVARLGDVAADSVGAWRQGELLLEQASVADAVHWVGRYRAGPTFVRGDLSRLPAVS
                     AALRIDRPEQALDALAATAGLQVTRLPFGVAIVQ"
     gene            complement(4180..4680)
                     /locus_tag="QEL58_003208"
     CDS             complement(4180..4680)
                     /locus_tag="QEL58_003208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019662030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HDS1677644.1"
                     /translation="MSSNAATLTELLIRERSALLRRVQRILGSDGGAEDVIQAVWFKA
                     RGVDDSQAIDNPRAYLYRLAANLATDHGRESTRRNRLLADHYLWGPDEVISTEEQAMA
                     QDELQRVLDAAGHLPEPTRSIFRLNRLQGLTQAEIARRLGVSVTTVENHVRTALQRLA
                     WARSGR"
     gene            complement(4767..5243)
                     /locus_tag="QEL58_003209"
     CDS             complement(4767..5243)
                     /locus_tag="QEL58_003209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008268367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677645.1"
                     /translation="MGGFKARWLACALLMAGAVQAGPLYVDAHDYPAPGAGHARFLAA
                     ERQLVRGFDDVCGDTFCEGEYYNLRAMRLRCSVQQSTGVVAGCIWTFSGSSTWVQQTG
                     QIDADVGRYACAVPLAAGTRLDELLEVWSVGSGHDALHALLPRTRTSVYDGLTDCL"
     gene            complement(5243..5734)
                     /locus_tag="QEL58_003210"
     CDS             complement(5243..5734)
                     /locus_tag="QEL58_003210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677646.1"
                     /translation="MSWCARFTAVVLLLVSLPAPARGLHVDLIDYPRPEANWERAYGL
                     EAALTREFDARCADTWCEGQYSNYQVLEFRCAVLAHRGTVQRCAWVIAASELAVQADS
                     GEIRVDNGRWVCPVELHPGTPVDAFHAALDAPGGLVGSLPGLDHGLFDVLPDCIRNAR
                     RDG"
     gene            5919..6455
                     /gene="ppa"
                     /locus_tag="QEL58_003211"
     CDS             5919..6455
                     /gene="ppa"
                     /locus_tag="QEL58_003211"
                     /EC_number="3.6.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006390151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic diphosphatase"
                     /protein_id="HDS1677647.1"
                     /translation="MGLELVSPGKNPPEEINVIIEIPKDSEPVKYEVDKETGAIFVDR
                     ILSTPMRYPCNYGYVPSTLCGDGDPADVLVVLPLPLVPGSVVRCRPVGVLKMSDEAGS
                     DEKILAVPVSKIFSGYAHVEDIAQVSSHWLERIGHFFEHYKDLEKGKWVKLDGWGGAA
                     EAKQILIEAHQRHLDSKA"
     gene            6607..7728
                     /locus_tag="QEL58_003212"
     CDS             6607..7728
                     /locus_tag="QEL58_003212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019662032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HDOD domain-containing protein"
                     /protein_id="HDS1677648.1"
                     /translation="MRILLVGDAASLPAELTEFIADLGEDWQPLTASDGQAAMTAVAT
                     QGVDAVIVCPQLPDLNATTLLGQIRTLRPETIRIALVDALHGNRPPPARLIGVAHRFL
                     PLPLAPEVLLEALTSLEELREVLDSPRLRDAIGRIEKLPSPPHLYLSLTQALEHDDDA
                     DSADVAKLVAADPAIAAKVLQLSNSAFFSQGRTISDLRTAVTRLGLATLRDLVLASEV
                     FSAPTLSTAERNSLQQRALLASRLAARLLPESSAELGATAALLADIGLLLPGVRNERS
                     EPSLAGDTRPGHAEAGAYLLGLWGLPMPIIEAVAFHLQPQRANTRSFWVTGAVHVALA
                     LVNGDPVDEDYLQRAGVLNKLPQWREHANALMGLVPSDA"
     gene            complement(7790..7999)
                     /locus_tag="QEL58_003213"
     CDS             complement(7790..7999)
                     /locus_tag="QEL58_003213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019338801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677649.1"
                     /translation="MKSTLLHKLSAAALIYATLVGAVFAQTGGVCGGGLYCEELRQEC
                     LAAGKSKVLCDLQYRHCVQDACGAR"
BASE COUNT         1344 a         2763 c         2700 g         1306 t
ORIGIN      
        1 tgcggaccag ggtccgcacc caccgaaggc gcactgcgca gtcgatcagt acttccaggt
       61 caacgccagg cgcgcggtgc ggcccggggc cggcatcacg cccagcgcca gcgggtccag
      121 gtagtaacgg tcggtcaggt tgtccacgcc cgcttccacg gacagctggt cgttgaagct
      181 ccagctggca aacaggtcga ccagggtggt cggccggtac agctgctgga tcgccgacag
      241 gccgacgttc cattccttgt ccagcttgct gatcgggccg gcgttgtgca ccacgcgggt
      301 gccgaaggtc aggcgctcgt cgaacaggcg cgaacccagg gtcaggttga ccatgtagcg
      361 cggcgggttc tgcgtgttgg tgtaggagcc ttcgaagccg ccatcgacgc agtccggcgt
      421 gccggccagc tccgcgttct tgcgctgctc gccataggcg cgacgctcgg cggcaatgtc
      481 cggcgcacac gtcttggcct tgaagtagta gtgcgcggac agatcggcaa acagcttgcc
      541 gctgtcatag ctggactgga actccatgcc cgacaccttg aaccggtcga cgttgcggat
      601 caggccggcc gacagtgtgc ggtagtcgcg ggtgatcagg tcgtcgatgc gggtatcgaa
      661 gtaggccagc ttcagcgcca ggcggtcgcc ggcggtgaac aggtcgtagc ggatggtgct
      721 ggcaccgatt tcccagctgc gcgcacgctc cggcttcagt tcacccaccg gcttggcagc
      781 ggtgaacagg cccagcgtgg tctcgaacag gcttggcagc ttggtgcctt cggcgtactt
      841 cacgtagacc atggtgtctt cgctgaagcg gtaggccacg ctggcagtcg gcgagaacgc
      901 actgtcgcgg cggcggatcg gctgcgacca gctccagctg accggcactt ccaggtcctg
      961 cgccttgccc gcgtcgtaga agttccagcc accgatgtcg gccaccgtgc ccttcttgta
     1021 cggcgaggcc agcagcgatt cctgggtgaa gttgccgttg gcatccggat accagttcag
     1081 cagcgcgatg cgcttggccc gccacgacgg cagcgccggg ttgccgttga gcagctcggt
     1141 gtagcggtac tggccctgca cctcgtaggc gtcgggcgtg gccaggcggt tgcggtcatg
     1201 cacatccacg cggttccagc ggccaccggc cagcagctcc caatgctcgt cgggctgcca
     1261 cttcagcgac gccactgcgc tgtattcctt gcgctcggca ttgcgcagga agcggttgtt
     1321 gaccagatcg tcgtgcatga ccggcccgga gctgcccggc gcgatgtctt catcgctgta
     1381 ggacaggccg tagtcgagcg tgaacgcacc cgcctgcgta tcgaacctcg aggtgttgct
     1441 ggcgtccagg ccgaagcgct tctgccgcag cggattgcgg taggcatcct tgtagcccgg
     1501 gtcgccactg aagctgggcg cgtcatacca ctcggtgcgg cggtcgaaat accacggcgt
     1561 gatgccggtc aggctgttgt acatcacgct gtcggtatcg gtgtaggtgg cattgacgcg
     1621 caggtcgacc agctcgctgt ccggattgaa gcggtagcgc agggtgtagc tgtccatgtc
     1681 gacgtggccc ggatcccact gcgggatgcg gtcacgatca acgcggatga tctgcgaggc
     1741 catgatctcg ccggcggtgc cttcgtaacg gcggtagccc gcctcaagcg tctgcgcatc
     1801 gtcaatgcgc caggtgccct tgagcagcgc cgacttcgag cgcgaggagg tgttgaacac
     1861 ctcggtacgc ggcgggttca gcggtgccag cgtgcgccgg gtctgcggga aatcatcgta
     1921 gccatgcttg cccgagaaat agttgcccgt atcgcggtag gcgtaggcgg cgaccaggtc
     1981 gaagcgatcc caatggccgg cggcggcgac gttgaagaac tggttgccgg tagcgctgcg
     2041 atcggtgcgc ggcgcagcac tgtacgccgg caggttgttc gcgctggcat tggccaggcc
     2101 accacgcacg cgcacgccga aatcgcggcc ttcgcgcagc acgtcaccga tcttcagcgt
     2161 ctccatctcg accacgccgc cgatgccgcc agaggcgttg gcctgcaggc tgggaccctt
     2221 ggtgatggtc aggctggaga tcaggtccgg gtccaggtag gtgcgctgcg actggcctgc
     2281 gtagccacgg taggtgtcga tgctggactg gccgccgtcg atgatcaccg gcacgcggcc
     2341 ctggccctgg ataccgcgga tgttgacgtc gaagccgttg ccgacgcgcg gatcgccggc
     2401 ggtgacaccg gccacgccct tgacgatgtc gccgttggag gtaccgcgga agcgctccag
     2461 gtgcgtgcgg ttgagcgtgg tggtggagcc gacgctgcgg tagctgtcga gcaggcgggc
     2521 ttcgtcgctg gtcgcgccgg catcgacacg gtcgccggcc acgctcagcg tgtcggtgac
     2581 gatcacgcca tcgccggcct gcgctggcgt cgctgcttcc agcgtgactg catcggcgct
     2641 gacccggcgt accgccaggc cactgccctg caacagccgc tgcagcgcgt cgttggcaga
     2701 caggctgccg ttgaccgcac gcgaggtcac gccctgggcc agcgtcgccg gatagacgac
     2761 ctggatgccg gactggcgca tgtagctgcg cagcgcttcg tccagcggca gcgccggaat
     2821 gtcgaagcgc tgcacggcgg catgatcgcc gcgggcgctc tgcgccagca cggacggcgc
     2881 ggcgctggcc aggcctgcgg ccagcaatgc gatgcacagg cgggacgggc gcagcacgcg
     2941 gcccggacga tgggagtcga acatggggga acctgtcagg taatcagtgc cgcgggcgcg
     3001 gcgtcatccg caacacaggc ggacacggcg acgtacgtgg cggcggcggg tacgttcgcg
     3061 gagtaagacg gatgggagcg cgacgacccc aagggagatt tgcggaagat gacgggtgaa
     3121 tgcatccacg catggcgtgg atctactgga cgatggcaac accgaagggg agacgggtca
     3181 cctgcaggcc ggccgttgcg gccagcgcat ccagcgcctg ttccgggcga tcgatgcgca
     3241 gcgctgcact caccgccggc agccgcgaaa ggtcaccgcg cacgaaggtc ggcccggcac
     3301 gataacgtcc cacccaatgc acggcatcgg cgacgctggc ctgctccagc agcagttcgc
     3361 cctggcgcca cgcgcctacg ctgtccgccg ccacgtctcc caggcgggcc acgccactgt
     3421 gctcgccata gactgcgcgc tggcccacct gcaggtaggt ccagccaccg tcggccgggc
     3481 tggccacccg caccctgccc tgcccgacct gggtttccac ctggccatcg ccgcgcgcga
     3541 cggtgaacgc ggtcgagatg tcctcgacca cgccattgcc cgcacgcaca ctgaaacgcc
     3601 gctctgcatc aggcgtgacg tcgaaccagg cgcgtccgcg cagcagctcg acctggcgtg
     3661 catgcgcgtc gaagtgcacg gcgatcgcgc tgtccgcatc cagcactgca cggctgccgt
     3721 cgggcagttg cacgtcctgc accacgtgcg tgctgcgatg atcggcctgc aggcgcagcc
     3781 aggcttccgg ccaggccacc agcatcgcca gtgcggccgc ggcagccatc gcccagcgca
     3841 gtcgccgcgg ccgcggccgc tgcaccggcc tggcctgcgg acgcggcccg atgctgcgcc
     3901 acagcgcgcg ctcgtgttcg aaagcccggc ggtgccccgg ctgggccagc cagcgttcga
     3961 actcgtgcat ccgcgcctcg ccgacgtcgc ccgacgccag ccacgcgatc cagccccggg
     4021 cctgttcggc cagggcatcg tcattggcgg cgggcagcat gttcggcggg ctcatcggct
     4081 ggcggacagg cgcattcaag cgcgggcagg ggaactagac cgcatccacg gtccagtgat
     4141 caagacgttc cagcggggag cacccccaag cctggacgat catcgaccgc tgcgcgccca
     4201 ggccaggcgt tgcagcgcag tgcgcacatg gttctcgacg gtggtgaccg acacgccgag
     4261 gcggcgcgcg atctcggcct gggtcaggcc ctgcaggcgg ttgagccgga agatgctgcg
     4321 cgtcggttcc ggcaggtggc ctgccgcatc cagcacgcgc tgcagttcgt cctgcgccat
     4381 ggcctgctcc tcggtcgaga tcacctcgtc cggcccccac agatagtggt ccgccagcag
     4441 gcggttgcgg cgggttgatt cgcggccgtg gtcggtggcc aggttggccg ccagccggta
     4501 cagataggcg cgcgggttgt cgatggcctg gctgtcgtcg accccacgcg ccttgaacca
     4561 caccgcctgg atcacgtcct cggcgccgcc gtcgctcccc aggatacgtt ggacgcggcg
     4621 cagcagcgct gaccgctcgc ggatcagcag ttcggtgagg gtggcggcat tggaggacat
     4681 gcgcggagcc ggtaccacgg acaagaaggc gtcgcgcatg ctactccgtt aatgcgaatc
     4741 agtcacgttt gcattcctgg cgactctcac aggcagtcgg tcagcccgtc gtagacgctc
     4801 gtacgggttc gaggcagcaa ggcatgcagc gcgtcatgtc cggatccgac gctccatacc
     4861 tccaacagtt cgtccagccg ggttcctgca gccagaggca ccgcgcaggc atagcggccg
     4921 acatcggcat cgatctgccc ggtctgctgg acccaggtcg agcttcccga aaaggtccag
     4981 atgcaaccgg caaccacgcc ggtggattgt tgcaccgagc agcgcaggcg catcgccctg
     5041 aggttgtagt actccccctc gcagaaggta tcgccacaga cgtcgtcaaa gccgcgcacc
     5101 agctgacgct cggctgcgag gaaacgcgcg tggccggcgc ccggtgcggg gtagtcatgg
     5161 gcatccacgt agagcggacc ggcctgcacg gcccccgcca tcaacagcgc gcaggccagc
     5221 caacgtgcct tgaacccgcc catcagccgt ccctccgcgc attccggatg cagtcgggca
     5281 gcacgtcgaa caggccgtga tcgagcccgg gcagggaccc caccaggcca cccggtgcgt
     5341 ccagcgcggc atggaacgcg tcaaccggtg tgccgggatg caactccact ggacagaccc
     5401 agcggccatt gtcgacgcgt atctcgccac tgtcggcctg taccgccagc tcgctggcgg
     5461 caatgaccca ggcacatcgc tgcacggtgc cgcgatgggc cagcacggca caacgaaact
     5521 ccagtacctg gtaattgctg tactgccctt cacaccaggt atcggcgcag cgtgcgtcga
     5581 actccctcgt cagcgccgcc tccaggccat aggcgcgctc ccagttggcc tccggtcgcg
     5641 gatagtcgat cagatcgacg tgcaggcctc gggcaggcgc cggcagggac accagcagca
     5701 gcacgacggc ggtgaatcgg gcacaccagg acatgggcag cactcctcgg agatgggggt
     5761 ccagcctgcg ccgcccgcgc cgggttcccc atcagccaaa ccccgggcgg tccgtaagga
     5821 cgccccgcgc ggtgccgtgg gctgccctcc cctgcacagc gcccggcaaa ggcataaaat
     5881 ggtcagctat ccgtctacac ccccacctgg agcacaccat gggtctggaa ctcgtctcgc
     5941 ccggcaagaa cccgccggaa gaaatcaacg tcatcatcga gatcccgaag gactcggagc
     6001 cggtgaagta cgaagtggac aaggaaaccg gcgcgatctt cgtcgaccgc atcctgtcca
     6061 ccccgatgcg ctacccgtgc aactacggct acgtgccgag caccctgtgc ggtgatggcg
     6121 acccggccga cgtgctggtg gtgctgccgc tgccgctggt gccgggctcg gtggtgcgct
     6181 gccgtccggt cggcgtgctg aagatgagcg atgaggcagg cagcgacgag aagatcctgg
     6241 ccgtgccggt ctcgaagatc ttcagcggct acgcccacgt tgaagacatc gcccaggtgt
     6301 ccagccactg gctggagcgc atcggccact tcttcgagca ctacaaggac ctggaaaagg
     6361 gcaagtgggt caagctcgac ggctggggcg gcgctgccga ggccaagcag atcctgatcg
     6421 aggcgcacca gcgccacctc gacagcaagg cctgagcctg aaccggatcg ctccggcatg
     6481 ccctgccgga gcgatgcggg tcacgtttca cgacgacggc acatcactct tgctgccgta
     6541 ttaggtaaat tgcgtcactt cacacgtcgt cgacatccat cgtcgagaca gccaggggaa
     6601 tgtgtcgtgc gtattctgct tgttggggat gcagccagcc tgccggccga gctgaccgaa
     6661 ttcattgccg atcttgggga agactggcaa ccattgaccg cctccgatgg ccaggctgcg
     6721 atgaccgcgg tcgccacgca gggcgtggac gcggtgatcg tctgcccgca gctgccggac
     6781 ctcaatgcca ccacgctgct gggccagatc cggaccctgc gcccggaaac catccgcatc
     6841 gcgctggtgg atgccctgca tggcaaccgt ccgccgccgg cacgcctgat cggtgtcgcc
     6901 catcgcttcc tgccgttgcc gttggcgccg gaagtgctgc tggaagcgct gaccagcctg
     6961 gaagagctgc gcgaggtgct ggacagccca cgcctgcgcg atgccatcgg ccgcatcgag
     7021 aagctgccat caccgccgca cctgtacctg agcctgaccc aggcgctgga gcacgacgac
     7081 gatgccgaca gcgctgacgt tgccaagctg gtcgccgccg atccggccat cgctgccaag
     7141 gtgctgcagt tgtcgaactc ggcgttcttc agccagggcc gcaccatctc cgacctgcgc
     7201 accgcggtga cccggctggg cctggccacg ctgcgcgacc tggtgctggc cagcgaagtg
     7261 ttctcggcgc cgacgctgtc gaccgccgaa cgcaattcgc tgcagcagcg cgccctgctc
     7321 gcctcgcggc tggccgcacg cctgctgccc gaatccagcg ccgaactggg cgcgaccgcc
     7381 gccctgctgg ccgacatcgg cctgctgctg cccggtgtgc gcaacgaacg ttccgagcca
     7441 tcgctggcgg gcgacacgcg tcccggccac gccgaggcgg gcgcctacct gctgggcctg
     7501 tggggcctgc cgatgccgat catcgaagca gtggccttcc acctgcagcc gcagcgcgcc
     7561 aatacacgca gcttctgggt gaccggtgcg gtgcacgtgg cattggcact ggtcaacggc
     7621 gatccggtgg acgaggacta cctgcagcgc gcgggcgtgc tcaacaagct gccgcaatgg
     7681 cgcgagcatg ccaatgcgtt gatggggctg gtacccagcg acgcctgaac ccgccactgc
     7741 accccagtgg aactcaaggg gcgcgcctca cggcgcgccc tttcctgcat caacgcgcgc
     7801 cgcaggcatc ctgcacgcag tgacgatact gcagatcaca cagcaccttc gacttgcccg
     7861 cagccaggca ttcctggcga agctcctcgc agtacagccc gcccccacag acgccaccgg
     7921 tctgggcgaa caccgcaccc accaatgttg catagatcag tgcagcagca gacagtttgt
     7981 gcaacagcgt gctcttcatc gctctctcca tgtgcaagtg tccgcaagtg gacccgtcaa
     8041 ctgtgttgat tacgacacgg caggaacgtg atttcgctca ccttccaaca tgtttcggaa
     8101 ttcccctaca aat
//
LOCUS       DAOKIP010000180         8021 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.180,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000180 DAOKIP010000000
VERSION     DAOKIP010000180.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 8021)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8021)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8021
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.180"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(29..1444)
                     /gene="smeC"
                     /locus_tag="QEL58_003214"
     CDS             complement(29..1444)
                     /gene="smeC"
                     /locus_tag="QEL58_003214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_116919954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux transporter outer membrane
                     subunit SmeC"
                     /protein_id="HDS1677650.1"
                     /translation="MKPMLLRALAAATMTTVLGGCVSMAPRYQRPEAPVPAQFGNAAT
                     GEADSGLAMPAWREVFVEPRLQQVIALALQNNRDLRVAVLQVEKERAQYRIQRAAWLP
                     SVDASGSVTRSRVSDANSETGATQITEADAVQVGISSWELDLFGRIRSLNNEALQNWL
                     ASAENQRAARTSLVAEVATAWLALAADEQSLAFTQQTLDSQQQTLQRTEARHAQGLAS
                     GLDLSQVQTSVEAARGALARLQTQQAQDRDALQLLVGAPLDAALLPSAHVLDGSVALA
                     PLPANLPSGVLLQRPDVLSAEHALQAANADIGAARAAFFPTLTLTANYGHSSTALSTL
                     FSAGTRGWSFAPSITAPIFHAGALKASLDASKIGKDIGIAQYEKAIQQAFSEVADALA
                     VRDHLATQMDAQRALVAASQRSYTLADARYRTGLDGYLQALDAQRSLYAAQQDLIALQ
                     QQEAGNRVTLFKVLGGGADAR"
     gene            complement(1441..4590)
                     /gene="smeB"
                     /locus_tag="QEL58_003215"
     CDS             complement(1441..4590)
                     /gene="smeB"
                     /locus_tag="QEL58_003215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_116919953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit SmeB"
                     /protein_id="HDS1677651.1"
                     /translation="MVRFFIDRPIFAWVIAIAVSLLGLLAILILPVDRYPQIAPPTIT
                     IRATYTGASSQTVENAVTQVIEQSQQSLDHLMYMTSTSASDGSAQVNLVFATGTNPDT
                     AQVQVQNQLQAAMATLPQAVQQNGLTITKSSGSIFEVLSFTSEDGSMDNFDVANFMEA
                     RIDDQISRVSGVGNIQPIGQEYAMRIWLDPEKMRQYALMPTDVETALQAQNTDVSAGE
                     LGGQPALKGQQLDATVTARSRLHTPEQFAQVVLKADANGSVVHLGDVATIGLGPESYD
                     SISTFNGKPSASLGIELNAGANAIAVSKAIDARLQQLQKYWPHGYTAHVAFTTTPFVT
                     ISLKEVVITLIEAIILVVLVMYLFLQNWRATLIPTIAVPVVLLGTFGVLAAFGYSINT
                     LTMFALVLAIGLLVDDAIVVVENVERVMTFEGLAPKPATLKAMGQITGALVGIVLVLT
                     AVFLPMAFFSGVTGVIYRQFSVTIAAAMILSVLVAMTITPALCGSILHQIPKGGHPHG
                     DHGGEPSLLGKFFIWFNHRFERTSNGLRRRVDGFLGRRTLGVVFYLVLSVVTGLLLWH
                     LPGAFLPDEDQGMLNALVKLPAGSTLEQTRAVMDRLSAAAVKDDSVLSIQATAGFSVT
                     GSGQNVGQAFIRLKDWDDRKDDADTIAARLTAAMASVPDAQVFITSPPAILGLGDAGG
                     FTLELQDEGGAGHAAAVAARNTLLKEAARDPKLVNVRYASLEDAPVYAVKVDDAKAQA
                     MGVNPQDVNDTLNAALGGDFVNNFIYKGRIKKVFIQGTAEARMQPQDIERWSVRNQAG
                     QMVPLSSLISTHWTSAPAALQRYNGVSAMEITGQPAPGVSSGEAMAEIARLADTLPEG
                     FSHAWSDMAYQEQLSGNQAPMLYAISLLFVFLCLAALYESWAVPFAVMLAVPVGVFGA
                     VLMMNLRGLNNDVYFQVGLLTTIGLAAKNGILIVEFARILEQQGKTTREAILQAVYLR
                     LRPIVMTSLAFLMGVLPLVFATGAGSAARRSLGTGVAGGTVASMVLGMFFVPLFYLLV
                     RRLFPGRAPAEATAPEASP"
     gene            complement(4602..5798)
                     /gene="smeA"
                     /locus_tag="QEL58_003216"
     CDS             complement(4602..5798)
                     /gene="smeA"
                     /locus_tag="QEL58_003216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_116919952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter periplasmic
                     adaptor subunit SmeA"
                     /protein_id="HDS1677652.1"
                     /translation="MSLPRPLSRSSHPLLLPLLLALAACSAGRTEAPAAPEVGIITAS
                     AQPLALQQTLPGRAVPFEVSEVRPQIGGLIRQRLFTEGQQVKAGQLLYQVDPAPYQAA
                     FDTARGQLAQAEASVLSAQPKAERTRALVSMDAASKQDADDATSALKQAQANVIAARA
                     ALRAARINLDYTRVTAPIDGRIGTSSVTAGALVAAGQDAALTTIQRLDPVYLDVTQSS
                     TQMLALRKQLDAGLVKAIDGKAQVKVVLEDGSTYAHEGTLEFVGSAVDPGTGNVVLRA
                     VVPNPDGLLLPGMYLKAVLPMATDARALLVPQKAVVRNERGEPLLRLLDAKDHVIERR
                     VSTGQVVGNQWQITQGLKAGERVIVSNGSAVSLGQQVKAVAATTAQLAAMPAIDPNGN
                     TDEKSH"
     gene            5916..7319
                     /gene="baeS"
                     /locus_tag="QEL58_003217"
     CDS             5916..7319
                     /gene="baeS"
                     /locus_tag="QEL58_003217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005414808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase efflux regulator BaeS"
                     /protein_id="HDS1677653.1"
                     /translation="MAPAMAKIRLKFGLTAKTFLAIFTACLLVLAVNGIASRVAFQTG
                     FLDYLNDQGDLRMQRLMPHLQREFREHGGWDHLRGDSDRWARMLRPDLAHGHEGPVPP
                     LSDQTGVPSRLGLFDAQHRYVAGNPDATSDDEPHAVQVDGHTVGWLGMVPFQTVIATN
                     DLNFYNTQMRAWWVIGISLLLVTVLLAWLVSRALRQRLAKLAAATHRLAAGDYATRIE
                     RTSDDELDALVNDFNRMAQALDDTERNRRAFIADISHELRTPLAVVRAELEAIEDGIR
                     PLDRANLGALQGEIRQLGKLIDDLHDLSMTQSGGLAYRFAPLDLVALLRSELNGMRVR
                     FANAGLALEETLPATPLQVSGDERRLQQVLANLLENALRYTHAGGRVLVQAARVPAGV
                     QLIVEDTAPGVPAEKCALLFERFYRVESSRNRASGGSGLGLAISHNIVLAHHGQIHAE
                     PSPLGGLRVVITLPEPA"
     gene            7316..8020
                     /locus_tag="QEL58_003218"
     CDS             7316..8020
                     /locus_tag="QEL58_003218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HDS1677654.1"
                     /translation="MSTSPVSTSPAAPAKILIVEDEPRLAAVLRDYLAAAGMVSEWVD
                     DGGQLIEAFARYQPDLVLLDLMLPQRDGVDLCRELRASSNVPVIMVTARVEEIDRLLG
                     LEIGADDYICKPFSPREVVARVVAVLRRYRPDPAARTSSGLHIDEPAARATWNGKGLD
                     LTPVEYRLLRTLLATPGRIWARDELLDRLYLDHRVVVDRTVDSHVRNLRRKLADAGME
                     GEPIRSVYGMGYSYEP"
BASE COUNT         1297 a         2747 c         2669 g         1308 t
ORIGIN      
        1 ggaagacgca cgcacccgcg ctagcgcgtt atcgcgcgtc ggcgcccccg cccagcacct
       61 tgaacaacgt cacccggttg cctgcctcct gctgctgcag ggcgatcagg tcctgctgcg
      121 cggcatacag gctgcgctgc gcatccagtg cctgcagata gccgtccaac ccggtgcggt
      181 aacgcgcgtc ggccagcgtg tagctgcgct ggctggcggc caccagcgcc cgctgcgcgt
      241 ccatctgcgt ggccaggtga tcgcgcacgg ccagcgcatc ggccacttca ctgaaggcct
      301 gctggatcgc cttctcgtac tgcgcgatgc cgatgtcctt gccgatcttc gaggcatcca
      361 gcgaagcctt caatgcgccc gcgtggaaga tcggtgcggt gatgctgggt gcaaacgacc
      421 agccacgggt gccggccgag aacagcgtcg acaacgcggt ggagctgtgg ccgtagttgg
      481 cggtgagggt cagcgtcggg aagaacgccg cgcgcgcggc accgatatcg gcattggccg
      541 cctgcagcgc gtgctcggct gagagcacgt ccgggcgctg cagcagcacg cccgacggca
      601 ggttggccgg caacggtgcc agtgccacgc tgccatccag tacgtgcgcg ctgggcagca
      661 gcgcggcatc cagtggtgcc cccaccagca actgcagcgc atcacgatcc tgcgcctgct
      721 gggtctgcag cctggccagc gcaccgcgcg cggcctccac gctggtctgc acctgcgaca
      781 ggtccaggcc cgaggccagc ccctgtgcat gacgggcctc ggtgcgctgc agggtctgct
      841 gctggctgtc cagggtctgt tgcgtgaatg ccagcgactg ctcatcggcg gccaatgcca
      901 gccaggccgt cgccacttcg gccaccaggc tggtacgcgc tgcacgctgg ttctcggcgc
      961 tggccagcca gttctgcagc gcttcgttgt tcaagctgcg gatgcgcccg aacaggtcca
     1021 gctcccagct gctgatgccg acctgcacgg catcggcttc ggttatctgg gtggccccgg
     1081 tctcactgtt ggcatcgctc acgcgcgagc gggtgacgct gccactggcg tccaccgacg
     1141 gcagccatgc cgcacgctgg atacggtact gcgcccgctc tttttcgacc tgcagcaccg
     1201 ccacgcgcag gtcgcggttg ttctgcagcg ccagcgcgat cacctgctgc aggcgcggct
     1261 ccacgaacac ctcgcgccag gccggcatcg ccaaccccga atcggcctcg cctgttgcag
     1321 cattgccgaa ctgcgccggc accggcgcct cggggcgctg gtagcgcggc gccatgctca
     1381 cgcagcctcc cagcacggtg gtcatggtgg cggccgccag ggcgcgcagc agcatcggct
     1441 tcatgggctt gcctccgggg cagtggcttc ggccggcgcg cggcccggga acaggcggcg
     1501 caccagcagg tagaacaacg gcacgaagaa catgcccagc accatcgagg cgaccgtacc
     1561 gccggccacg ccggtaccca gcgaacggcg cgcggccgag ccggcaccgg tggcgaacac
     1621 cagcggcagc acgcccatca ggaacgccag cgaggtcatc acgatcggcc gcagccgcag
     1681 gtagaccgcc tgcaggatcg cctcgcgggt ggtcttgccc tgctgctcga ggatgcgcgc
     1741 gaactcgacg atcaggatgc cgttcttggc cgccaaccca atcgtggtca gcaggccgac
     1801 ctggaagtac acgtcattgt tgaggccgcg caggttcatc atcagtaccg caccgaacac
     1861 gcccaccggt accgccagca tcaccgcgaa cggtaccgcc cagctttcat acagcgcggc
     1921 caggcacagg aacacgaaca gcagcgagat ggcgtacagc atcggcgcct ggttgcccga
     1981 cagctgttcc tggtaggcca tgtccgacca ggcatggctg aagccctccg gcaaggtgtc
     2041 ggccaggcgc gcgatctcgg ccatcgcctc gccggagctg acacccggcg ctggctggcc
     2101 ggtgatttcc atcgccgaca caccgttgta gcgctgcagt gcagccggtg cgctggtcca
     2161 atgcgtgctg atcagcgacg acagcggcac catctgcccg gcctggttgc gcacgctcca
     2221 gcgctcgatg tcctgcggct gcatgcgtgc ttccgccgtg ccctggatga acaccttctt
     2281 gatgcgaccc ttgtagatga agttgttgac gaaatcgccg cccagcgcgg cattcaaggt
     2341 gtcattgacg tcctgcggat tcacgcccat ggcctgtgcc ttggcatcgt ccaccttcac
     2401 cgcatacacc ggcgcgtcct ccaggctggc gtagcgcaca ttgaccagct tcggatccct
     2461 ggcagcctcc ttcagcagcg tgttgcgtgc ggccacggcg gcggcatggc cggcaccgcc
     2521 ctcgtcctgc agttccaggg tgaaaccgcc ggcatcgccg aggccgagga tggccggcgg
     2581 cgaggtgatg aacacctgtg catcgggcac gctggccatg gccgcggtca agcgcgcggc
     2641 gatggtatcg gcatcgtcct tgcggtcgtc ccagtccttc aggcggatga aggcttggcc
     2701 gacgttctgg ccgctgccgg tgacactgaa accagcggtg gcctggatcg agagcacgct
     2761 gtcgtccttc actgcggcgg cactgaggcg atccatcact gcacgggtct gctccagggt
     2821 ggacccggcc ggcagcttca ccaacgcatt gagcatgccc tggtcttcat cgggcaggaa
     2881 cgcacccggc aggtgccaca gcagcaagcc ggtgaccacg ctcagcacca ggtagaacac
     2941 cacgcccagc gtgcgccggc caagaaagcc atccacacga cggcgcagcc cattcgacgt
     3001 gcgctcgaag cgatggttga accagatgaa gaacttgccc agcaggctcg gttcgccgcc
     3061 gtggtcgccg tgcggatgcc cgcccttggg aatctggtgc aggatgctgc cgcacagggc
     3121 cggcgtaatg gtcatcgcca ccagcaccga caggatcatc gccgcagcaa tcgtcaccga
     3181 gaactggcga tagatcacgc cggtgacacc gctgaagaac gccatcggca ggaacactgc
     3241 agtcaacacc agcacgatgc cgaccagcgc gccggtaatc tggcccatgg ccttcagcgt
     3301 ggccggcttc ggggccagcc cttcgaaggt catcacccgc tccacgttct ccaccaccac
     3361 gatggcatcg tccaccagca ggccgatggc cagcaccagc gcgaacatgg tcagggtgtt
     3421 gatggaatag ccgaacgcgg ccagcacgcc gaacgtaccc agcagcacaa ccggcaccgc
     3481 gatggtcggg atcagcgtgg cccgccagtt ctgcaggaac aggtacatca ccagcaccac
     3541 caggatgatc gcctcgatca gggtgatcac cacttccttc agcgagatgg tcacgaacgg
     3601 ggtggtggtg aaggccacgt gggcggtgta gccatgcggc cagtacttct gcagctgctg
     3661 aagccgtgca tcgatggcct tggagacggc gatggcattg gcaccggcat tgagctcgat
     3721 gcccagcgag gctgacggct tgccgttgaa ggtactgatg ctgtcgtagc tctccggccc
     3781 caggccgatc gttgccacgt cgcccaggtg cacgacgctg ccgttggcat cggccttgag
     3841 caccacctgc gcgaactgct cgggggtgtg caggcggctg cgcgcggtca cggtcgcgtc
     3901 cagctgctgg cccttcagtg ccggctggcc ccccagctca ccggccgaca cgtcggtgtt
     3961 ctgcgcctgc agtgcggtct cgacatccgt cggcatcagt gcgtactggc gcatcttttc
     4021 cgggtccagc cagatacgca tggcgtattc ctggccgatc ggctggatgt tgccaacacc
     4081 actgacgcgg ctgatctggt catcgatgcg cgcttccatg aagttggcga catcgaagtt
     4141 gtccatgctg ccgtcttcgc tggtgaacga cagcacctcg aagatcgaac cactggactt
     4201 ggtgatggtc aggccgttct gctgcaccgc ttgcggcagc gtggccatcg cggcctgcag
     4261 ctggttctgc acctgcacct gcgccgtatc cggattggtg ccagtggcga acaccaggtt
     4321 gacctgcgcc gagccatcgg aagcactggt ggaggtcatg tacatcaggt ggtccaggct
     4381 ctgctgggac tgctcgatga cctgggtgac cgcgttttcc acggtctgcg acgaagcgcc
     4441 ggtgtaggtg gcgcggatgg tgatggtggg cggggcgatc tgcgggtagc ggtccaccgg
     4501 caggatcagg atcgcaagca ggccgagcag gctgaccgcg atggcgatca cccaggcgaa
     4561 gatcggccgg tcgatgaaga aacgaaccat gcgcggcaac ctcagtgcga cttttcgtcg
     4621 gtgttgccgt tcgggtcgat cgccggcatt gctgccagct gcgcggtggt ggccgccacc
     4681 gccttcacct gctggcccag cgataccgcg ctgccgttgc tgacgatcac ccgctcgccg
     4741 gccttcaggc cctgcgtgat ctgccactgg ttgcccacca cctggccggt gctgacccgg
     4801 cgctcgatga cgtggtcctt ggcgtcgagc aggcgcagca gcggctcgcc gcgctcattg
     4861 cgcaccaccg ccttctgcgg caccagcagc gcgcgcgcat cggtggccat cggcagcacc
     4921 gccttcaggt acatgcccgg cagcagcagg ccgtccgggt tcggaacgac cgcgcgcagc
     4981 accacgttgc cggtacccgg atcgaccgca ctgccgacga attccagcgt gccttcatgg
     5041 gcataggtgc tgccgtcctc cagcacgacc ttcacctgtg ccttgccatc aatggccttc
     5101 accaggccgg catcgagctg cttgcgcaac gccagcatct gcgtgctgga ctgggtgaca
     5161 tccaggtaca ccgggtccag ccgctggatg gtggtcagcg cggcgtcctg gcccgcggcg
     5221 accagcgcgc cggcagtgac gctggaggtg ccgatacggc cgtcgatcgg tgcggtcacc
     5281 cgcgtgtagt caaggttgat gcgggcggcc cgcagcgcag cgcgcgcagc gatcacattg
     5341 gcctgcgcct gcttcaatgc cgaggtcgca tcatcggcat cctgcttgct ggctgcatcc
     5401 atgctcacca acgcacgggt gcgctcggcc ttcggttgcg ccgacagcac gctggcctcg
     5461 gcctgggcca gctggccacg ggcggtgtcg aaggccgcct ggtacggcgc cgggtcgacc
     5521 tggtacagca gctggccggc cttgacctgc tggccttcgg tgaacagccg ctggcggatc
     5581 agtccaccga tctgcggccg cacctcggac acttcgaacg gcactgcgcg gccgggcagg
     5641 gtctgctgca gcgccagcgg ctgcgcactg gcggtgatga tgcccacttc aggcgcggcc
     5701 ggcgcttcgg tcctgccggc ggaacaggct gccagggcca gcagcagcgg cagcagcagg
     5761 ggatgggaag aacgggacag cgggcgcggg agtgacatgg ggggcgtggg ggccttgcgt
     5821 tgacccgggc acgctgccgt ggaactgtgc agagaatatg gagattgtgc gaccggctca
     5881 gctggcgctt gctttcggcg ccgcatgcgc cgctaatggc ccccgcgatg gcgaagattc
     5941 gactcaaatt cggcctgacc gcgaagactt tcctcgcgat cttcactgcc tgcctgctgg
     6001 tgctggcagt gaacggcatt gccagccgcg tggcgttcca gaccggcttc ctggactacc
     6061 tcaacgatca gggcgacctg cgcatgcagc gcctgatgcc gcacctgcag cgcgaattcc
     6121 gcgagcacgg cggctgggac cacctgcgcg gtgacagcga tcgctgggcg cggatgctgc
     6181 gcccggacct ggcgcatggg catgaagggc cggtgccacc actgtccgac cagaccggcg
     6241 ttccgtcgcg gctgggcctg ttcgatgcac agcaccgcta cgtggcaggc aatcccgacg
     6301 cgaccagcga tgacgagccg cacgcggtgc aggtggacgg gcacacggtg ggctggctgg
     6361 gcatggtgcc gttccagacc gtcatcgcca ccaacgacct gaacttctac aacacccaga
     6421 tgcgcgcctg gtgggtgatc ggcatctcgc tgctgctggt gacggtgctg ctggcgtggc
     6481 tggtgtcacg cgcgctgcgc cagcgcctgg ccaagctcgc ggcggccacc caccggctcg
     6541 ccgccggcga ctatgccacc cgcattgagc gcaccagcga cgacgagctg gatgcactgg
     6601 tcaacgactt caaccggatg gcgcaggcgt tggacgacac cgagcgcaac cgccgtgcct
     6661 tcatcgccga catctcgcac gagctgcgta cgccgctggc ggtggtgcgt gccgagctgg
     6721 aggcgatcga ggacggcatc cgcccgctgg accgcgccaa tcttggtgcc ctgcagggcg
     6781 agatccgcca gcttggcaag ctgatcgacg acctgcacga cctgtcgatg acccagtccg
     6841 gcggcctggc ctaccgtttc gccccgctgg acctggtggc gctgctgcgc agtgaactca
     6901 atggcatgcg cgtgcgcttc gccaatgcgg gcctggcgct ggaagagacg ttgcccgcca
     6961 caccgctgca ggtgtccggt gacgagcggc gcctgcagca ggtgctggcc aacctgctgg
     7021 agaacgcgct gcgctacacc catgccggcg gccgcgtact cgtgcaggcc gcacgggtgc
     7081 ctgccggcgt acagctgatc gtggaagaca ccgcaccggg cgtaccggcg gaaaaatgtg
     7141 cgctgctgtt cgagcgcttc taccgggtgg aaagctcgcg caatcgtgcc agcggcggca
     7201 gcggactggg cctggccatc agccacaaca tcgttcttgc ccaccacggc cagatccacg
     7261 ccgaaccctc gccgctgggt gggctgcgcg tggtcatcac cctgccggag cctgcatgag
     7321 cacctccccc gtcagcacat cgcccgccgc accggcgaag attctcatcg ttgaggacga
     7381 accgcgcctg gccgccgtgc tgcgcgacta cctggccgca gcgggcatgg tcagcgaatg
     7441 ggtggatgat ggcggccagt tgatcgaggc cttcgcgcgc taccagcccg atctggtgct
     7501 gctggacctg atgctgccgc aacgcgatgg cgtggatctg tgccgcgagc tgcgcgccag
     7561 cagcaacgtg ccggtgatca tggtcaccgc gcgggtggag gagatcgacc gcctgctggg
     7621 cctggagatc ggcgccgacg actacatctg caagccgttc agcccgcgcg aagtggtggc
     7681 gcgggtggtg gcggtgctgc gccgctacag gccggacccg gccgcgcgca ccagcagcgg
     7741 cctgcacatc gacgaaccgg ccgcgcgtgc cacctggaac ggcaagggcc tggacctgac
     7801 cccggtggag taccgcctgc tgcgcaccct gctggccacg cccggccgga tctgggcacg
     7861 cgatgaactg cttgaccgcc tctatctgga ccaccgcgtg gtagtcgacc gcaccgtcga
     7921 cagccatgtg cgcaacctgc gccgcaagct ggccgatgcc ggcatggaag gcgagccgat
     7981 ccgatcggtg tacgggatgg gttacagcta cgaaccctag c
//
LOCUS       DAOKIP010000181         8020 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.181,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000181 DAOKIP010000000
VERSION     DAOKIP010000181.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 8020)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8020)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8020
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.181"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            126..512
                     /locus_tag="QEL58_003219"
     CDS             126..512
                     /locus_tag="QEL58_003219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019336706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HDS1677655.1"
                     /translation="MFTPSTLLQYVRDVATSATFYSGILGKPPVEQSPGFALFLLGDG
                     AALGLWQRDDVQPPVSAQAGAAELAMVVANPETVQQMHDAWRALGVQILQAPVTLEFG
                     HTFVGADPDGHRLRVYSRAEGMVARD"
     gene            complement(636..2024)
                     /locus_tag="QEL58_003220"
     CDS             complement(636..2024)
                     /locus_tag="QEL58_003220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014648691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxo acid dehydrogenase subunit E2"
                     /protein_id="HDS1677656.1"
                     /translation="MSQTKNFNLPDLGEGLPDATIVEWFVKEGDVIKLDEPLVSMETA
                     KAVVEVPSPFSGKVLKLSGAAGDIIPTGSVLASFELDPNLPQRADGQDTGHSHGHAAP
                     AAAPTPPPLPAAAAPVATEAAKPAAAERDDAGTVVGAMQSSNAVHAEQALAVGGVKAV
                     PAVRATARKLGVDLSRVRATGADGAVTMADVKQAAANGSAKLGAAPAPVAAAAYAAPA
                     PAQVSAPVQSEARTPLSAAGKPMRTQPPGVVAKGQPEPLKGVRRNMARVMADAHSKVV
                     PTTLNDDADIHAWLPGNDVTARLVRSIVVAAQKVPAMNAWFDGEALTRTLHAQVDIGI
                     AVDTDDGLFVPALRNADMLDARGIREGVNRLREQVESRSIAASELSGYTISLSNFGMF
                     AGRYATPVVVPPCVAIVGAGRARHQMTPVMGGVEAHKVIPLSVTFDHRAATGGEAARF
                     LRAMMDDLALAS"
     gene            complement(2021..2374)
                     /locus_tag="QEL58_003221"
     CDS             complement(2021..2374)
                     /locus_tag="QEL58_003221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012512332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-binding protein"
                     /protein_id="HDS1677657.1"
                     /translation="MRARLLGAYRSQYPNPLRFRTGQIVEVGVRDEEWPAFAWVRTND
                     GRAGWAPIAWLQLLDEGRAEALCDYDARELDVESGEMVKLHHEHGGWWWSERANGATG
                     WLPARELELLEENCT"
     gene            complement(2376..3443)
                     /locus_tag="QEL58_003222"
     CDS             complement(2376..3443)
                     /locus_tag="QEL58_003222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008267499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-ketoacid dehydrogenase subunit beta"
                     /protein_id="HDS1677658.1"
                     /translation="MDEIKNGAPGAHTNAADSAAVARGEQSMTTTPITLIEAITQALA
                     WELEHDPSVLVLGEDVGVNGGVFRATAGLQQRFGSERILDTPLDETTIAGLTIGLAAQ
                     GMKPVAEAQFDGFMYPMVDHIVCHAARLRYRTRGRLHCPMVLRVPWGGGIRAPEHHSE
                     ANEAIFTNVPGLRVVLPSSPQRAYGLLLAAIREPDPVIYMEPKRIYRQYKEVVVNDGE
                     ALPLDVCFVLRDGTDVTLVTWGAQVKEALEAADKLAGEGISAEVIDVATLRPLDFATI
                     AESVAKTGRCVIVQEAPKTAGFGAEIAARLAEESIYDLLAPVERVTGYDTHIPLFRLE
                     MKYLPSVERIVAAAKRAVAAG"
     gene            complement(3436..4518)
                     /gene="pdhA"
                     /locus_tag="QEL58_003223"
     CDS             complement(3436..4518)
                     /gene="pdhA"
                     /locus_tag="QEL58_003223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016850583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase (acetyl-transferring) E1
                     component subunit alpha"
                     /protein_id="HDS1677659.1"
                     /translation="MTVAAEFKIEYLQYLDADGKLVRDDLPASLRDPKVLVPLFKQML
                     FVRTFDSKSIALQRTGKLGTYAACLGHEAAHVGIGAAMQKDDVFAPSYREYGAMFMRG
                     VRPHDVLMYWGGDERGNDYGGNAAKDFPFCVPISTQCLHAAGAALKFKLNKEPQIAVA
                     VCGDGGSSKTDFYAALNSAGAYKLPLILCIVNNGWAISVPRSAQTGAETLAQKGLAGG
                     LHCLQVDGNDLIAVLAAMEQARERALAGDGGTVLELMTYRLSDHTTADDARRYRDDAE
                     VKDAWQREPMLRLRKYLINAGVWSEEEETAWVAECGTRVDEEVNLYLNTPVQPVEAMF
                     DFLYADPPQDLLAQRAQAIALEQRHG"
     gene            4854..5729
                     /locus_tag="QEL58_003224"
     CDS             4854..5729
                     /locus_tag="QEL58_003224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005419892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan 2,3-dioxygenase"
                     /protein_id="HDS1677660.1"
                     /translation="MSVDNNQRDLEAGIHTDLQGRLTYGGYLRLDQLLSAQQPLSSPP
                     HHDEMLFIIQHQTSELWLKLLGHELRAAIGFLQRDEVWQCRKVLARSKQVLRQLTEQW
                     SVLETLTPSEYMGFRDVLGPSSGFQSLQYRYIEFLLGNKNAQMLQVFEHDPAGQAQLR
                     TVLEAPSLYEEFLKYLARFGHAVPAVYENHDWTQPHVADDALQPVFERIYQDTDRYWR
                     EYSLCEDLVDLETAFQLWRFRHMRTVMRVIGFKRGTGGSSGVGFLAKALELTFFPELF
                     QVRTSLQAAPPAALG"
     gene            5910..7409
                     /locus_tag="QEL58_003225"
     CDS             5910..7409
                     /locus_tag="QEL58_003225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014509241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide MFS transporter"
                     /protein_id="HDS1677661.1"
                     /translation="MSVNATANTPEPALPDFKTTLGHPRPLWMLFMTEFWERFAFYGI
                     RWALVLYIVSQFYNGNAAGEGDASRIYGAYLALVYAAAIFGGYVADRVLGYQRSILTG
                     AIIMAAGLFMISLPQEHIFKLGLATIIVGNGLFKPNISTMVGKLYGLKDERRDSGFTI
                     FYMGINIGAMIAPVLTEYLARKVFGTSEMPSYKVVFIASGVGMLISLVWFYIGRAGLK
                     GIGAPPAGAEGFGRIIMVLVGAVVAIPVAYFLLATGATALAWILGAMFTALAVLLLVE
                     GIREGKVQRDRVIAMLIIFAFNVMFWMFFEQAGSSFTFLAENIVNRQMGDWTFPTAWF
                     QSVNSVAIITLAPIIAWIWVALGRANPSIPRKFGLGLLFNGAAFALLMYALSQMVVDG
                     KIPFWTLFMVYVIQSVGELCLSPIGLSMVTKLAPVRLVGFGMGGWFLSTGIGNNLSGI
                     FAGVVSGEGGMTVESALKGYTFGFWALIGSGVVLFLIAPLINKLMHGVK"
     gene            7429..>8020
                     /locus_tag="QEL58_003226"
     CDS             7429..>8020
                     /locus_tag="QEL58_003226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HDS1677662.1"
                     /translation="MRMKLGGAVVVVCAALIGACSQPQPPAAAEPTQPLDTRPTEPPV
                     ADPSEPVASGNTPVAADIAAIAGLGAQFDPARDPADDLATAKVEAQRGKKRILLEVGN
                     AACDRCQALDELVEGNGDLRRFRDAHYVWVKVNASDEQPNTAFLAQFPEMERDYPHLL
                     VLDADGSLLVSQATGELRRGEAFQPVRVSAFLKQWAP"
BASE COUNT         1250 a         2725 c         2645 g         1400 t
ORIGIN      
        1 agaggtcgag cttgctcgac cgcctttgat cttcgcgaac ggccgtcgag caagctcgac
       61 gctactgaca gaatctgtca gcaggccggt accaccatga agcctcccaa caacggagct
      121 tccccatgtt cacgcccagc accctgctgc agtacgtgcg cgacgtcgcc accagcgcaa
      181 ctttctacag cggcattctc ggcaaaccac cggtcgaaca gtcgcccggc ttcgccctgt
      241 ttctgctcgg cgatggcgcc gcactcggcc tgtggcagcg cgatgacgtg cagccccccg
      301 tgtctgcgca ggccggtgcc gccgaactgg cgatggtggt ggccaacccg gagaccgtgc
      361 agcagatgca cgatgcgtgg cgcgcgctcg gcgtgcagat cctgcaggcg ccggtgacac
      421 tggaattcgg ccacaccttc gtcggcgccg atcctgatgg ccaccgcctg cgtgtctaca
      481 gccgcgccga gggcatggtc gcgcgcgatt gatcgcccgc attgtgtaga tccacgccat
      541 gcgtggatac gggcacaaaa aaacgccggg cagtgcccgg cgtttttcca gatcatgtgc
      601 caaccaaggt tggcacctac cgatcaggtg gccgatcagc tggccagcgc caggtcgtcc
      661 atcatcgcgc gcaggaagcg ggccgcttca ccaccggtcg ccgcgcggtg gtcgaaggtg
      721 accgacagcg ggatcacctt gtgcgcttcc acgccgccca tcaccggggt catctggtgg
      781 cgggcacggc cggcaccgac gatggccacg cacggcggca ccacgaccgg ggtcgcgtag
      841 cggccggcga acatgccgaa gttggacagc gagatggtgt agccgctcag ttccgaggcg
      901 gcgatcgaac gcgattccac ctgctcgcgc aggcggttga cgccttcgcg gatgccacgt
      961 gcatcgagca tgtcggcatt gcgcagcgcc ggcacgaaca ggccgtcgtc ggtgtccacg
     1021 gcaatgccga tgtccacctg cgcgtgcagg gtgcgggtca gcgcttcacc gtcgaaccag
     1081 gcgttcatcg ccggcacctt ctgcgcggcc accacgatcg agcgcaccag gcgcgcggtg
     1141 acgtcgttgc ccggcagcca ggcgtggatg tccgcgtcgt cgttcagcgt ggtcggcacg
     1201 accttgctgt gcgcatcggc catcacgcgg gccatgttgc ggcgcacgcc cttcagcggt
     1261 tccggctggc ccttggccac cacgcccggc ggctgggtgc gcatcggctt gccggcggca
     1321 gacagcgggg tgcgcgcttc gctctgcacc ggggccgaca cctgcgccgg ggccggcgcg
     1381 gcataggcag ccgcggcaac cggtgccggc gcggcgccga gtttggcact gccattggcg
     1441 gcggcctgct tgacgtcggc catggtcacc gcgccatcgg cgccggtggc acgcacgcgg
     1501 gacaggtcca cgcccagctt gcgcgcggtg gcacgcacgg ccggaacggc cttgacgcca
     1561 ccgacggcca gcgcctgctc ggcgtgcacg gcgttggagc tctgcatcgc accgaccacg
     1621 gtaccggcgt catcacgctc ggcggcggcg ggcttggcgg cttcggtggc caccggtgcg
     1681 gcagcggccg gcagcggcgg cggcgtcggt gcggcggcag gcgcggcgtg gccgtggctg
     1741 tggccggtgt cctggccatc ggcacgctgc ggcaggttcg ggtccagctc gaagctggcc
     1801 agcaccgaac cggtcgggat gatgtcgccg gcggcgccgg acagcttcag caccttgccg
     1861 gagaacggcg agggcacttc gacgacggcc ttggcggtct ccatcgagac cagcggctcg
     1921 tccagcttga tcacatcgcc ttccttgacg aaccactcga cgatggtcgc gtccggcagg
     1981 ccttcgccca ggtcgggcag gttgaagttc ttggtctggc tcatgtgcag ttctcttcca
     2041 gcagttccag ttcgcgggcc ggcagccaac ccgtcgcgcc attggcgcgc tcggaccacc
     2101 accacccacc gtgttcgtga tgaagcttca ccatctcgcc gctttccaca tccagctcgc
     2161 gggcgtcgta gtcgcacagc gcttcggcgc gaccctcgtc cagcagctgc agccaggcga
     2221 tgggcgccca tccagcgcgc ccatcgttgg tgcgtaccca ggcaaacgcc ggccattcct
     2281 cgtcacgaac gcctacttcg acgatctggc cggtgcggaa ccggagcggg ttgggatact
     2341 ggctgcggta agcccccaga aggcgggccc gcatgtcagc cggccgccac cgcgcgcttg
     2401 gccgcagcca cgatccgctc aacgctcggc aggtacttca tttccaggcg gaacagcgga
     2461 atgtgggtgt cgtagccagt gacacgctcg accggagcca gcaggtcgta gatcgattcc
     2521 tcggccaggc gcgcggcgat ctcggcgccg aagcccgcgg tcttcggggc ctcctgcacg
     2581 atcacgcagc gaccggtctt ggccaccgac tcggcgatgg tggcgaagtc cagcggacgc
     2641 agcgtggcca cgtcaatcac ttcggcgctg atgccttcgc cggccagctt gtcggccgct
     2701 tccagcgctt ccttcacctg cgcgccccag gtcaccaggg tcacgtcggt gccgtcgcgc
     2761 agcacgaagc agacatccag cggcaaggct tcgccgtcgt tgacgaccac ttccttgtac
     2821 tggcggtaga tgcgcttggg ttccatgtag atcaccggat ccggttcgcg gatcgcggcc
     2881 agcagcaggc cgtaggcgcg ctgcgggctg gacggcagca ccacgcgcag gcccggcacg
     2941 ttggtgaaga tcgcctcgtt ggcttcgctg tggtgttccg gcgcacggat gccgccgccc
     3001 cacggcacgc gcagcaccat cgggcagtgc aggcggccac gggtgcggta acgcagtcgc
     3061 gcggcgtggc agacgatatg gtcgaccatc gggtacatga aaccgtcgaa ctgggcctcg
     3121 gccaccggct tcatgccctg cgcggccagg ccgatggtca ggccggcgat ggtggtttca
     3181 tccagcgggg tgtcgaggat gcgctcggag ccgaagcgct gctgcaggcc ggcagtggca
     3241 cggaacacgc cgccgttgac gcccacgtct tcgcccagca ccagcaccga cgggtcgtgc
     3301 tccagctccc aggccagcgc ctgggtgatg gcttcgatca gggtgatggg ggtggtggtc
     3361 atgctctgtt ctccgcgcgc gacggcggcg ctgtcggcgg cgttggtgtg cgcgccgggc
     3421 gcgccgttct tgatctcatc catggcgctg ctccagggcg atcgcctgcg cacgctgggc
     3481 cagcaggtcc tgcggcggat cggcgtagag gaaatcgaac atcgcctcga ccggctgcac
     3541 cggcgtgttg aggtacaggt tcacttcctc gtccacgcgc gtaccgcact cggcgaccca
     3601 ggcggtttct tcttcctcgc tccagacgcc ggcgttgatc aggtacttgc gcaggcgcag
     3661 catcggctcg cgctgccagg catccttcac ctcggcatcg tcgcggtagc ggcgcgcgtc
     3721 atcggcggtg gtgtggtcgg acaggcgata ggtcatcagt tccagcacgg tgccaccgtc
     3781 gccggccagc gcacgttcgc gcgcctgctc catggccgcc agcactgcaa tcaagtcgtt
     3841 gccgtccacc tgcaggcaat gcaggccgcc ggccaggccc ttttgcgcca gcgtctcggc
     3901 accggtctgg gccgaacgcg ggaccgagat ggcccagccg ttgttgacga tgcacaggat
     3961 cagcggcagc ttgtaggcgc cggccgaatt cagtgccgcg tagaagtcgg tcttggagct
     4021 gccgccgtcg ccgcacacgg ccaccgcgat ctgcggttcc ttgttgagct tgaacttcag
     4081 cgcggcaccc gcagcgtgca ggcactgggt ggagatcggc acgcagaacg ggaagtcctt
     4141 ggccgcgttg ccgccgtagt cgttgccgcg ctcgtcgccg ccccagtaca tcagcacgtc
     4201 gtgcggacgc acgccacgca tgaacatcgc gccatactcg cggtacgaag gcgcgaacac
     4261 gtcgtccttc tgcatcgcgg caccgatgcc cacgtgcgcg gcttcatggc ccaggcaggc
     4321 ggcgtaggtg ccgagcttgc cggtgcgctg cagcgcgatg gatttgctgt cgaacgtacg
     4381 tacgaacagc atctgcttga acagcggtac caggaccttg gggtcgcgca gcgacgcggg
     4441 caggtcatcg cggacgagct tgccgtccgc gtccaggtac tgcaggtatt cgatcttgaa
     4501 ttcagcggca accgtcattg cgtactgcac cttcgacaga gaagttacaa atgatatgaa
     4561 tcgccatgtt aaggaacgcg tacggaatag ccttcctgcg ccgcaacacg gcgatgccct
     4621 gttttacccc tgccggcggg tggggggcca ataacaacaa cgtattcagt cgttgctgca
     4681 aagcatcaga atacgcctct ggctgactgg ctgcgcaacg gcctgatcgg ttccacgcgc
     4741 agccccggca tcggccgatg ctccacggcc aaccgcacgg cccggtatgg acccggcggc
     4801 tgccagcgcg gcggcaacgc gctacccttg ccgcccccga tctggtcccg cccatgtccg
     4861 tcgacaacaa ccaacgcgat ctcgaagccg gcatccacac cgatctgcag gggcgcctga
     4921 cctatggcgg ctacctgcgg ctggaccagc tgctcagcgc gcagcagccg ctgtccagcc
     4981 cgccgcatca cgacgagatg ctcttcatca tccagcacca gacctcggag ctgtggctga
     5041 agctgctcgg ccacgagctg cgcgcggcga tcggcttcct gcagcgcgat gaagtctggc
     5101 agtgccgcaa ggtgctggcg cgcagcaagc aggtgctgcg ccagcttacc gagcagtggt
     5161 cggtgctgga aacgctgacc ccgtccgagt acatgggttt ccgcgatgtg ctgggcccat
     5221 cctcgggctt ccagtcgctg cagtaccgct acatcgagtt cctgctgggc aacaagaacg
     5281 cgcagatgct gcaggtgttc gagcacgacc cggccgggca ggcgcagctg cgcaccgtgc
     5341 tggaggcgcc gagcctgtac gaggaattcc tgaagtacct ggcccgcttc ggccacgccg
     5401 taccggccgt gtatgaaaac cacgactgga cccagccgca tgtagccgac gacgcactgc
     5461 agccggtgtt cgagcgcatc taccaggaca ccgaccgcta ctggcgcgag tactcgctgt
     5521 gcgaggacct ggtggacctg gagactgcct tccagctgtg gcgattccgt cacatgcgca
     5581 ccgtgatgcg ggtgatcggc ttcaagcgcg gcaccggcgg ctcgtccggg gtcggcttcc
     5641 tggccaaggc gctggagctg accttcttcc ccgagttgtt ccaggtacgc accagcctgc
     5701 aggcggcgcc cccggccgca ttgggctgat ccccattcag cttgaatccc ggccggcggc
     5761 tggatcgttt cagatgcaag ttcagcgagc aggcggtgac ctgcctcaaa cggcgtgtat
     5821 ttgacgtgaa cgccagaagt cggtgatcct cgcgcgttgc tccactgcac atcggacgtg
     5881 ctcgtcatcc accgaaccag gaaacccgca tgagcgtaaa cgccactgcg aacaccccag
     5941 agccggccct gccggacttc aagaccacgc tgggccatcc gcgcccgctg tggatgctgt
     6001 tcatgaccga gttctgggaa cgctttgcgt tctacggcat ccgctgggcc ttggtgctgt
     6061 acatcgtctc ccagttctac aacggcaacg ctgccggtga aggcgacgcc agccgcatct
     6121 acggtgccta cctggccctg gtgtacgccg cggcgatctt cggtggctac gtggccgacc
     6181 gggtactggg ctaccagcgc tcgatcctga ccggcgcgat catcatggcc gccggcctgt
     6241 tcatgatctc gctgccgcag gagcacatct tcaagctcgg cctggccacc atcatcgttg
     6301 gcaacggcct gttcaagccg aacatctcga ccatggtcgg caagctgtat ggcctgaagg
     6361 acgagcgtcg cgattcgggc ttcaccatct tctacatggg tatcaacatc ggcgcgatga
     6421 tcgccccggt gctgaccgag tacctggccc gcaaggtctt cggtacctcg gaaatgccgt
     6481 cgtacaaggt cgtgttcatc gcctcgggcg tgggcatgct gatctcgctg gtgtggttct
     6541 acatcggccg cgccggcctg aagggcatcg gtgcaccgcc ggccggcgct gaaggtttcg
     6601 gccgcatcat catggtgctg gtcggtgccg tggtcgcgat cccggtggcc tacttcctgc
     6661 tggccaccgg cgccaccgcg ctggcctgga tcctgggcgc gatgttcacc gcgctggccg
     6721 tgctgctgct ggttgagggc atccgcgagg gcaaggtgca gcgcgaccgc gtgatcgcca
     6781 tgctgatcat cttcgccttc aacgtgatgt tctggatgtt cttcgaacag gccggcagct
     6841 cgttcacctt cctggccgag aacatcgtca accgccagat gggtgactgg accttcccga
     6901 cggcctggtt ccagtcggtc aactcggtgg ccatcatcac cctggcgccg atcatcgcct
     6961 ggatctgggt ggccctgggt cgcgccaatc cgtcgattcc gcgcaagttc ggcctcggcc
     7021 tgctgttcaa tggcgccgcc ttcgccctgc tgatgtatgc gctgtcgcag atggtcgtgg
     7081 acggcaagat cccgttctgg accctgttca tggtctacgt catccagtcc gtgggtgagc
     7141 tgtgcctgtc gccgatcggc ctgtcgatgg tgaccaagct ggctccggtg cgcctggtcg
     7201 gcttcggcat gggtggctgg ttcctgtcca ccggcatcgg caacaacctg tcgggcatct
     7261 tcgctggtgt ggtcagtggt gaaggcggca tgacggtcga gtcggccctg aaggggtata
     7321 ccttcgggtt ctgggccctg atcggctccg gcgtggtgct gttcctgatc gcgccgctga
     7381 tcaacaagct gatgcacggc gtcaagtgat gaagagaggg tagctggcat gcgtatgaag
     7441 ctcggtggtg cagtggtggt ggtctgtgcg gcgctgatcg gcgcctgttc ccaaccgcaa
     7501 ccgcctgccg ccgccgagcc gacgcagccg ctggataccc ggcccaccga gccaccggtc
     7561 gctgacccca gcgaaccggt ggcctcgggc aacaccccgg tggcggcgga catcgccgcc
     7621 atcgccgggc tcggcgcgca gttcgacccg gcccgagacc ccgccgacga tctggccacc
     7681 gccaaggtgg aagcccagcg cggcaagaag cgcatcctgc tcgaggtcgg caacgcggcc
     7741 tgcgatcgct gccaggcgct ggacgagctg gtggaaggca acggcgacct gcgccgcttc
     7801 cgcgacgccc actacgtgtg ggtgaaggtc aacgccagcg acgaacagcc caacaccgcc
     7861 ttcctcgccc agttcccgga aatggagcgc gactacccgc acctgctggt gctcgacgcc
     7921 gacggcagcc tgctggtgtc gcaggccacc ggcgagctgc gccggggcga agcgttccag
     7981 cctgtgcgtg tgagcgcctt cctcaaacaa tgggcgcctg
//
LOCUS       DAOKIP010000182         7970 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.182,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000182 DAOKIP010000000
VERSION     DAOKIP010000182.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 7970)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7970)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7970
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.182"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(23..898)
                     /locus_tag="QEL58_003227"
     CDS             complement(23..898)
                     /locus_tag="QEL58_003227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012479770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="folate-binding protein YgfZ"
                     /protein_id="HDS1677663.1"
                     /translation="MPDNLPPAFVGYPRLPGHQLLSLQGVDAAVFAHAQFSSDVTALP
                     LLHWQWSAWLSAKGRTLAVFQLLRLAEDHVMLVLADGDADAIASQLQRFVFRRKVKVL
                     VRSDLAVAGAFTAPEAASGAAIAHAEGDGWELDLGSDALPRTLRIGATDAFAAGSEAD
                     EVAFALAWRQADLRYGLPRLEESQREVWTPQQLGLDRLNGYSVKKGCYPGQEIVARTH
                     FLGKAKRAVQLLHTAAPAQAGDGVQQDGATLGTIASVAGDLALAVLPLEASDADLQVG
                     DAVAQRMPLLDGLAR"
     gene            938..1108
                     /locus_tag="QEL58_003228"
     CDS             938..1108
                     /locus_tag="QEL58_003228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1674 domain-containing protein"
                     /protein_id="HDS1677664.1"
                     /translation="MIGQTTPTPDDESEAPLVPAAPVPVEQEKAEEFGGRGGLDPVRY
                     GDWEKNGRCIDF"
     gene            1165..1557
                     /gene="sdhC"
                     /locus_tag="QEL58_003229"
     CDS             1165..1557
                     /gene="sdhC"
                     /locus_tag="QEL58_003229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005416132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase, cytochrome b556
                     subunit"
                     /protein_id="HDS1677665.1"
                     /translation="MATRQRPLSPHLQVYRWQIQMATSILHRATGVFLSVGALIIAAG
                     LLALMMGPESWNCFTGHAGAWYGRVFLFAWTWSFAYHLCNGIRHVVQDFAIGFSIPAF
                     IRSSWLSVTGSLVITLLVWAYVMFGGAA"
     gene            1554..1940
                     /gene="sdhD"
                     /locus_tag="QEL58_003230"
     CDS             1554..1940
                     /gene="sdhD"
                     /locus_tag="QEL58_003230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005995651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase, hydrophobic membrane
                     anchor protein"
                     /protein_id="HDS1677666.1"
                     /translation="MSRFRTPLKSVRGLGSAKTGTEHFVHQRLTAAALVVLGIWFLVF
                     VLSLLGSDYATAAAAVAKPWNAVPLIGLLIAMFWHAQLGMQVVLEDYIHESLLALVLQ
                     TAVKFVAVLGMIVSVFAVGRIALGVA"
     gene            1972..3762
                     /locus_tag="QEL58_003231"
     CDS             1972..3762
                     /locus_tag="QEL58_003231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020851880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase flavoprotein subunit"
                     /protein_id="HDS1677667.1"
                     /translation="MSAYKITEHKYDMVVVGAGGAGLRATFGLAAKGLQTVCLTKVFP
                     TRSHTVAAQGGISAALANMGEDDWRYHFFDTIKGSDWLGDQDAIEYMCREAIPAIIEL
                     EHYGVPFSRTAEGKIYQRPFGGMTTKYGEGPAAQRTCAAADRTGHAMLHTLYQQSLKH
                     DARFMIEYFALDLIFDEEGACRGVLALDMSDGTLHLFRAQGVVLATGGYGRAYFSATS
                     AHTCTGDGGGLAMRAGIAMQDMEFVQFHPTGIYGAGCLITEGVRGEGGILRNSSGERF
                     MERYAPHYKDLASRDVVSRSMTIEIREGRGVGEHKDHILLDLTHLGPGVIDEKLPGIA
                     ESARIFAGVDVHKQPIPVIPTVHYNMGGIPTNYHGEVVRKVGDNPDAVVPGLYAIGEA
                     ACVSVHGANRLGSNSLLDLVVFGRAVANRCAETIKPGASHKPLPADACDKALGLLDKL
                     RHANGDTPTSVIRDRMQRTMQADAAVFRTSQTLKEGCEKMDKIFDSFQDVKVSDRSLV
                     WNSDLIETYELNNLLLNAVATINSAEQRKESRGAHAHEDFPDRDDVNWQKHTLVSVDE
                     KGKCSFDYRPVHMYTLTDDVSVVPPKPRVY"
     gene            3829..4614
                     /locus_tag="QEL58_003232"
     CDS             3829..4614
                     /locus_tag="QEL58_003232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011037280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase iron-sulfur subunit"
                     /protein_id="HDS1677668.1"
                     /translation="MAEFSLPKNSKITKGKHFPVKNGGKNVRTFKIYRWSPDDDSNPR
                     TDTYEVDLDACGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGTNTLACTR
                     AISDCGKKEVPIYPLPHMNVVKDLVPDLTHFYAQYASIKPWIRTQTPAPPDRERLQSP
                     EDRKKLDGLYECILCACCSTSCPSYWWNGERYLGPAILLQAYRWIIDSRDEDTGARLD
                     DLEDPFKLYRCHTIMNCARTCPKGLNPALAIAEIKKLMMERRA"
     gene            4688..4936
                     /locus_tag="QEL58_003233"
     CDS             4688..4936
                     /locus_tag="QEL58_003233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase assembly factor 2"
                     /protein_id="HDS1677669.1"
                     /translation="MEEDVLLKKLRWRCRRGMRELDQLFGRYLDHEWSTAPTEEREVF
                     LFLLDCEDDKLWRWFMGYEACPHAHAIPLMQKILALKP"
     gene            4887..5336
                     /locus_tag="QEL58_003234"
     CDS             4887..5336
                     /locus_tag="QEL58_003234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677670.1"
                     /translation="MRTRSLSCRRSSPSSLEWRPSRLQAAAQLAVLLAAPWLLRASEL
                     PPRLLIPAVLLAWGLGLAELAWRLRRPRLQVRLPPLPEPLQVAGQDIEVPRLVVRGAW
                     LLLSWREGRRRRHLLFWPDVLDSGQRRELRLAVAARAVSRRPRTMAP"
     gene            5360..6601
                     /locus_tag="QEL58_003235"
     CDS             5360..6601
                     /locus_tag="QEL58_003235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016902586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein-releasing ABC transporter permease
                     subunit"
                     /protein_id="HDS1677671.1"
                     /translation="MFKPIPVAIGLRYLRAKRRNGFISFISMASILGIALGVTVLITT
                     LAVMSGFQKEIRSRLLQMTAHTTISRDGEPMPDWMRVVDIASKDPRVAGAAPYIEIQS
                     MISGPRVQGAIIQGIDPALEPKVSVIDKKVTKGSYDSLKPGSFNLLLGKELAIWLGVD
                     VGDQVLVTFAEVQGTPAGAVPRMKRFTVSGIFEAGYNEVDRGVGFANMQDLERVLRSD
                     GATGVRLKLHDMDRSLEVGVDLAQSLGGAYRVSDWTQQNANLYHSLRMEKVVMGILLS
                     LIIAMGAFNLVSSQVMLVTDKQADIAILRTLGLTPGGVMQVFMVQGSLIGIFGTLAGL
                     IGGITLTLNLERILGAIEAVFNVKLMPEDVYYITGLPTDMQTGDVVAITVVALLMSFL
                     ATLYPAWRAARTQPAEALRYE"
     gene            6594..7307
                     /gene="lolD"
                     /locus_tag="QEL58_003236"
     CDS             6594..7307
                     /gene="lolD"
                     /locus_tag="QEL58_003236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014036806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein-releasing ABC transporter
                     ATP-binding protein LolD"
                     /protein_id="HDS1677672.1"
                     /translation="MNKVFNRGDEVIRAEALGKTYAEGRMQTPVFDGLDLTVTAGETV
                     AIIGASGAGKSTLLHLLGGLDVPTAGEVYVTGQRMSALSDTARGLLRNQALGFVYQFH
                     HLLPEFTALENVMMPVLLAGTAVAEASSRATALLEAVGLGHRLDHKPGELSGGERQRA
                     AVARALVNHPACVLGDEPTGNLDDRTASTVFELMLELNRARHTSLVLVTHDRSLARRL
                     DRVLELREGRLHALAHADV"
     gene            7529..>7970
                     /locus_tag="QEL58_003237"
     CDS             7529..>7970
                     /locus_tag="QEL58_003237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005412976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677673.1"
                     /translation="MKTPILMAGLCLALAACATTGRLSSAEKLDLYRAHAGAPQNDMQ
                     FFGSLNGWTELGDSALAVWTRPSEAYLLELNGPCQDLTFATAIGLTSQMNRVSTRFDK
                     VLVRDPTGGPRMPCFIKSIRKLDVKALRASEQELRQAQVQEREED"
BASE COUNT         1370 a         2684 c         2600 g         1316 t
ORIGIN      
        1 cccaccgaag cgtcgggtgg attcagcgcg ccaatccgtc cagcaacggc atgcgctgcg
       61 cgacggcatc gccgacctgc agatcggcgt cactggcctc caacggcaac accgccagcg
      121 ccaggtcacc ggctacgctg gcgatcgtgc ccagcgtagc gccgtcctgc tgcacgccat
      181 caccggcctg cgccggcgcc gcggtatgca gcagctgcac cgcgcgcttg gccttgccga
      241 ggaagtgggt gcgggcgacg atctcctggc ccgggtagca gcccttcttc acgctgtagc
      301 cgttcaggcg atccagcccc agttgctgcg gagtccacac ctcgcgctgg ctttcctcaa
      361 gccggggcag gccgtagcgc aggtcggcct ggcgccaggc cagggcgaag gccacctcat
      421 cggcctcgct gccggcggcg aaggcgtcgg tagcgccgat gcgcagggtg cgcggcaggg
      481 catcgctgcc caggtccagt tcccagccgt caccttcggc gtgcgcaatg gcggcgccac
      541 tggcggcctc gggcgcggtg aaggcgccgg ccaccgcgag gtcgctgcgc accagcacct
      601 tcaccttgcg gcggaacacg aagcgctgca gttgcgacgc aatcgcatcg gcatcgccgt
      661 cggccagcac cagcatcaca tggtcttcgg ccagccgaag cagctggaac accgccaggg
      721 tgcggccctt ggcactcagc caggcactcc actgccagtg cagcaggggc agggcagtga
      781 catcgctgct gaactgagcg tgggcgaaaa cggccgcatc gacaccctgc aggctcagca
      841 gctggtgccc gggaaggcgc ggatatccga cgaaagcagg gggcaggttg tcaggcacgt
      901 gaacgaggtc taaaatttgt gcgttgcgag accgaacatg ataggccaaa caacccccac
      961 tcccgacgac gaatctgaag ccccgctggt ccccgcggca cccgtgcccg tggaacagga
     1021 aaaagcagag gaattcggcg gccgcggcgg acttgatccg gtgcggtacg gcgattggga
     1081 gaaaaacgga cgctgcatcg atttctgatc agcattgagc caacgcggcc gtgtgccgcc
     1141 cagccgagac aacgagccca gcgaatggcg accagacaac gcccactttc cccgcacctt
     1201 caggtgtatc gctggcagat tcagatggcc acctcgatcc tgcatcgagc cactggcgtc
     1261 tttctgtctg ttggtgccct catcatcgcc gcgggcctgc tggccctgat gatggggccc
     1321 gagtcctgga actgcttcac cggccatgcc ggggcctggt atggccgcgt gttcctgttc
     1381 gcgtggacat ggtcgttcgc ctatcacctg tgcaatggca tccgccatgt ggtgcaggac
     1441 ttcgccatcg gcttcagcat tcccgccttc atccgcagca gctggctgtc ggtcaccggc
     1501 agcctggtga tcaccctgct ggtgtgggcc tatgtgatgt tcggaggtgc cgcgtgagca
     1561 ggttccgtac cccgttgaag agcgtgcgcg gccttggttc ggccaagacc ggcaccgaac
     1621 acttcgtgca ccagcgcctg accgccgccg ccctggtggt gctgggcatc tggttcctgg
     1681 tcttcgtgct gagcctgctg ggttcggact acgcgaccgc cgccgccgcc gtggccaagc
     1741 cgtggaatgc cgtgccgctg attggcctgc tgatcgccat gttctggcac gcgcagctcg
     1801 gcatgcaggt cgtgctggaa gattacatcc acgaatcgct gctggccctg gtgctgcaga
     1861 ccgcggtgaa gttcgtcgcc gtgctcggca tgatcgtcag tgtgtttgcg gtgggccgca
     1921 tcgccctcgg cgttgcctga gcccaggcac caacacagga atccagatta gatgtccgct
     1981 tacaagatca ccgaacacaa gtacgacatg gtcgtggtcg gcgccggcgg cgccggcctg
     2041 cgcgccacgt tcggcctggc cgccaagggc ctgcagaccg tgtgcctgac caaggtcttc
     2101 ccgacccgtt cgcacaccgt tgccgcccag ggcggtatct cggccgcact cgccaacatg
     2161 ggcgaggacg actggcgcta ccacttcttc gacaccatca agggttcgga ctggctgggc
     2221 gaccaggacg ccatcgaata catgtgccgt gaggccatcc cggccatcat cgagctcgag
     2281 cactacggcg tgccgttctc gcgcaccgcc gaaggcaaga tctaccagcg tccgttcggt
     2341 ggcatgacca ccaagtacgg cgaaggcccg gcggcgcagc gtacctgcgc agcggccgac
     2401 cgtaccggcc acgcgatgct gcacaccctg taccagcagt cgctgaagca cgacgcgcgc
     2461 ttcatgatcg agtacttcgc gctcgacctg atcttcgatg aagagggcgc ctgccgcggt
     2521 gtgctggccc tggacatgtc cgatggcacc ctgcacctgt tccgcgccca gggcgtggtg
     2581 ctggccaccg gcggttacgg ccgtgcctac ttcagcgcca cctcggcgca cacctgcacc
     2641 ggcgacggtg gcggcctggc catgcgtgcc ggcatcgcca tgcaggacat ggagttcgtg
     2701 cagttccacc cgaccggcat ctacggcgcc ggctgcctga tcaccgaggg tgtccgcggt
     2761 gaaggcggca tcctgcgcaa cagcagcggc gagcgcttca tggagcgcta cgcaccgcac
     2821 tacaaggacc tggcctcgcg cgacgtggtc agccgttcga tgaccatcga gatccgcgaa
     2881 ggccgcggcg tcggcgagca caaggaccac atcctgctcg acctgaccca ccttggcccg
     2941 ggcgtgatcg acgagaagct gccgggcatc gctgaaagcg cccgcatctt cgccggcgtc
     3001 gacgtgcaca agcagccgat cccggtcatc ccgaccgtgc actacaacat gggcggcatc
     3061 ccgaccaact accacggcga agtcgtgcgc aaggtcggcg acaaccccga tgcggtggtg
     3121 ccgggcctgt acgccatcgg cgaagcggcc tgcgtgtccg tgcatggcgc caaccgcctg
     3181 ggctcgaact cgctgctgga cctggtggtg ttcggtcgtg cggtggccaa ccgctgcgcc
     3241 gagaccatca agccgggcgc atcgcacaag ccgctgccgg ccgatgcctg cgacaaggcg
     3301 ctgggcctgc tggacaagct gcgccacgcc aacggcgata ccccgacctc ggtcatccgc
     3361 gatcgcatgc agcgcaccat gcaggccgac gcggccgtct tccgcaccag ccagacgctg
     3421 aaggaaggct gcgagaagat ggacaagatc ttcgactcgt tccaggacgt gaaggtctcc
     3481 gaccgttcgc tggtgtggaa ctcggacctg atcgagacct acgagctgaa caacctgctg
     3541 ctcaacgcgg tggcgacgat caactcggcc gaacagcgca aggaaagccg cggcgcgcat
     3601 gcgcacgagg acttcccgga ccgcgacgac gtcaactggc agaagcacac cctggtcagc
     3661 gtcgacgaga agggcaagtg cagcttcgac taccgtccgg tgcacatgta cacgttgacc
     3721 gacgacgtgt ccgtagtgcc gccgaagccg cgcgtgtact gatccgaccc cgcctaccat
     3781 gcaatccgcg cccacgggcg cgggccgcct gagccaacga gagcagccat ggccgagttt
     3841 tcactcccca agaattccaa gatcacgaag ggcaagcact tccccgtcaa gaacggcggc
     3901 aagaacgtgc gcaccttcaa gatctaccgc tggagtccgg acgacgacag caacccgcgc
     3961 accgatacct atgaagttga tctggacgcc tgtggcccga tggtcctgga cgccctgatc
     4021 aagatcaaga acgagatcga cccgaccctg accttccgcc gctcctgccg cgaaggtatc
     4081 tgtggctcgt gcgcgatgaa catcgacggc accaacaccc tggcctgcac ccgagccatc
     4141 tcggactgcg gcaagaagga agtgccgatc tatccgctgc cgcacatgaa cgtggtcaag
     4201 gacctggttc cggacctgac ccacttctac gcgcagtacg cctcgatcaa gccgtggatc
     4261 cgcacccaga ccccggcacc gccggaccgt gagcgcctgc agtcgccgga agaccgcaag
     4321 aagctggatg gcctgtacga gtgcatcctg tgcgcctgct gctcgaccag ttgcccgagc
     4381 tactggtgga acggcgagcg ctacctgggc ccggcgatcc tgctgcaggc ctaccgctgg
     4441 atcatcgact cgcgcgatga ggacaccggt gcgcgcctgg acgatctgga agatccgttc
     4501 aagctgtacc gctgccacac catcatgaac tgcgcccgga cctgcccgaa gggcctgaac
     4561 ccggcgctgg cgatcgccga gatcaagaag ctgatgatgg aacgccgcgc ctgatacggc
     4621 gccgggtagt tgcatgaccc cagcagagcc acgccatgcg tggctttgct gtatctggag
     4681 aagcacgatg gaagaagatg ttctgctgaa gaagctgcgc tggcgttgcc gccgcggcat
     4741 gcgcgaactg gaccagttgt tcggccgtta cctggaccac gaatggagca ctgcgccgac
     4801 cgaagagcgc gaggttttcc tgttcctgct cgattgcgag gacgataagt tgtggcgctg
     4861 gttcatgggc tatgaggcct gcccgcatgc gcacgcgatc cctctcatgc agaagatcct
     4921 cgccctcaag ccttgagtgg cgtccctcgc ggctgcaggc cgccgcccag ctggcggtgc
     4981 tgctggccgc gccctggctg ctgcgcgcct cggagctgcc accgcgcctg ctgatccctg
     5041 ctgtgttgct ggcctggggc cttggcctgg ccgagctggc ctggcggctg cgcaggccgc
     5101 gcctgcaggt gcggctgccg ccgcttcccg agccgctgca ggtggccggg caggacatcg
     5161 aggtgccacg gctggtggtg cgtggtgcct ggctgttgtt gtcctggcgt gagggccgac
     5221 gccgccggca cctgttgttc tggccggatg tgctcgattc cgggcagcga cgtgaactgc
     5281 gactggccgt ggccgcacgt gccgtttccc gtcggccgcg tacgatggca ccataagctg
     5341 aattgactgg cgtgcctgca tgttcaaacc catccccgtg gcgatcggcc tgcgctacct
     5401 gcgcgccaag cgccgcaacg gcttcatctc cttcatctcg atggcatcga tcctgggcat
     5461 cgcgctcggc gtcacggtgc tgatcaccac gctggcggta atgagcggtt tccagaagga
     5521 aatccgcagc cgcctgctgc agatgaccgc gcacaccacc atcagccgcg acggcgagcc
     5581 gatgccggac tggatgcgtg tggtcgacat cgccagcaag gacccgcgcg tggcgggtgc
     5641 cgcgccgtac atcgagatcc agtcgatgat cagcggcccg cgcgtacagg gcgcgatcat
     5701 ccagggcatc gacccggcgc tggagccgaa ggtgtcggtg atcgacaaga aggtcaccaa
     5761 gggcagctat gacagcctca agccgggcag cttcaacctg ctgctgggca aggagctggc
     5821 gatctggctg ggcgtggacg tcggcgacca ggtactggtg accttcgccg aagtgcaggg
     5881 cacgcctgcc ggcgcagtgc cgcggatgaa gcgtttcacc gtcagcggca tcttcgaagc
     5941 cggctataac gaggtcgacc gtggcgtcgg cttcgccaac atgcaggacc tggagcgcgt
     6001 gctgcgcagt gacggtgcca ccggcgtgcg gctgaagctg cacgacatgg accgctcgct
     6061 ggaggtgggc gtggacctgg cgcagagcct cggtggcgcc taccgcgtga gtgactggac
     6121 ccagcagaat gccaacctct accactcgct gcgcatggag aaggtggtga tgggcatcct
     6181 gctgtcgctg atcatcgcga tgggtgcgtt caacctggtg tcctcgcagg tgatgctggt
     6241 caccgacaag caggccgata tcgcgatcct gcgcaccctc ggccttaccc cgggcggggt
     6301 gatgcaggtg ttcatggtgc agggttcgct gatcggcatc ttcggcaccc tggccgggct
     6361 gatcggcggc atcaccctga ccctcaacct cgaacgcatc ctcggtgcca tcgaggcggt
     6421 gttcaacgtc aagctgatgc ctgaggacgt gtactacatc accggcctgc cgaccgacat
     6481 gcagaccggc gacgtggtgg cgatcaccgt ggtcgcgctg ctgatgagct tcctggccac
     6541 cctgtatccc gcctggcggg cagcacgcac ccagccggcg gaggccctgc gctatgaata
     6601 aggtcttcaa ccgcggcgat gaagtgatcc gcgccgaagc actgggcaag acctacgccg
     6661 aagggcgcat gcagaccccg gtgttcgatg gcctggacct gaccgtgacc gctggcgaga
     6721 cggtggcgat catcggtgcg tccggcgccg gcaagagcac gctgctgcac ctgctgggtg
     6781 ggttggatgt tccaaccgcc ggcgaagtct atgtgaccgg ccagcgcatg tcggcgctgt
     6841 cggataccgc gcgcggcctg ctgcgcaacc aggcgctggg ctttgtctat cagttccatc
     6901 acctgctgcc ggaattcacc gcgctggaaa acgtgatgat gccggtactg ctggccggta
     6961 ccgccgtggc cgaggcgtcc agccgggcaa cggccctgct ggaggcggtc ggtctcggcc
     7021 atcgcctgga ccacaagccg ggcgagctgt ccggtggcga acgccagcgt gccgccgtgg
     7081 cgcgtgcact ggtcaaccac ccggcctgcg tgcttggcga cgagccgacc ggcaacctgg
     7141 atgaccgcac cgccagcacc gtgttcgagc tgatgctgga actcaaccgc gcccgccaca
     7201 ccagcctggt gctggtcacc cacgaccgca gcctggcgcg tcgccttgat cgggtgctgg
     7261 aactgcgcga agggcggctg cacgcattgg cccacgctga cgtctgagcc gctggtcccg
     7321 cttgggtgga agccgacctt ggtcggctgc tcctgcgggg caagcgccaa ccaaggttgg
     7381 cgactaccgg attccggagt cctgggcctg ccttgatgga ggtcgacctt ggtcgaccgc
     7441 cgaccgccgc ctgaatgggg ctcccggtcg tcgcacgggc gccactctgg caggcgcatg
     7501 atggcgacag taccccgagg agatcgccat gaagaccccg atcctgatgg ccggcctctg
     7561 cctggccctg gccgcctgtg cgaccaccgg ccggctcagc agtgccgaga agttggacct
     7621 gtaccgtgcg catgccggtg cgccgcagaa cgacatgcag ttcttcggca gcctcaatgg
     7681 ctggaccgaa ctgggagaca gcgcgctggc ggtatggacc cgccccagcg aagcctatct
     7741 gctggagttg aacggcccct gccaggacct gacgtttgcc accgccatcg gcctgaccag
     7801 ccagatgaat cgcgtttcga cgcgcttcga caaggtgctg gtgcgcgacc ccacgggcgg
     7861 cccacgcatg ccgtgcttca tcaagagcat ccgcaagctg gacgtcaagg cgttgcgcgc
     7921 gtccgagcag gagctgcgcc aggcccaggt gcaggagcgc gaggaagaca
//
LOCUS       DAOKIP010000183         7946 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.183,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000183 DAOKIP010000000
VERSION     DAOKIP010000183.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 7946)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7946)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7946
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.183"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(298..1803)
                     /locus_tag="QEL58_003238"
     CDS             complement(298..1803)
                     /locus_tag="QEL58_003238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005413258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54-dependent Fis family transcriptional
                     regulator"
                     /protein_id="HDS1677674.1"
                     /translation="MSESRILVLDNDAVRAERTVALLEFMDFNPRWVSDAADFDLGRQ
                     RQNDWMAVIVGSLDDSAASTALYHWLGGSSLPPPVLLADGDAAAFAQQHGLHEANIWP
                     LETPLRHAQMEALLRRASLKRLDAEHQAGAVQEQGPTGNGPAVTELRTMIEQVAAFDT
                     TVLVLGESGTGKEVVSRAIHQRSPRRDGPFVAINCGAIPADLLESELFGHEKGAFTGA
                     LTARKGRFEMAEGGTLLLDEIGDMSLPMQVKLLRVLQERSFERVGGNQTIRCNVRVVA
                     ATHRDLETRIAEGKFREDLFYRLNVFPIDVPALRERREDLPALVETIAAQLARTGRGE
                     VRFTAEALQALAGYEWPGNVRELTNLVERLAVLHPGGSVRVQDLPARYRGDAALAAVA
                     APAPVQSVASEERLDLRSFSFHTPGSGNQPALEHGIAVNRVAAPAALPDEGMDLRNHM
                     ANIELGLINEALERTQGVVAHAAQLLGLRRTTLVEKLRKYGIEREQAELAG"
     gene            complement(1800..2177)
                     /locus_tag="QEL58_003239"
     CDS             complement(1800..2177)
                     /locus_tag="QEL58_003239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010485922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDS1677675.1"
                     /translation="MNKLTVLLVDDHEGFINAAMRHFRKIDWLQIVGSAGNGLEAIER
                     SETLRPQVVLMDLAMPEMGGLQATRLIKSQDDAPYIVIASHFDDAEHREHALRAGADN
                     FVSKLSYIQEVMPILEGLREDRS"
     gene            complement(2192..3601)
                     /gene="rpoN"
                     /locus_tag="QEL58_003240"
     CDS             complement(2192..3601)
                     /gene="rpoN"
                     /locus_tag="QEL58_003240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019302731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase factor sigma-54"
                     /protein_id="HDS1677676.1"
                     /translation="MKAALSTQLGQQLHLTPQLLQSIRLLQLDGLHLEQEIQRLLDSN
                     PLLEIEEAEAPAAEATEASTTTLETAAFDELPESSMWDVAGTSWQDGDDDRMARIAAG
                     ESTDPQLRVLQRLSLDMDDRGLAVAAFWLDHCDDAGYLQAPLGQLQLLASAQFDIDAD
                     GVEAIRQQLLHGEPAGMAAQDLREGLQAQLRSLHGVVAARHLAARILDGALDALAAHD
                     YPALARQHDAEIDDVREAVRLILSLQPRPGDSLLPERNAVVVPDVVAWHADAQWKVAL
                     NPATSRRVSINSQYEQALADSNDAAPALREMLQEARWFSRGLSMRYDTLLRTARVIVE
                     RQAAFLVRGEEAMAPLTLKEVAEEIGMHESTVSRITTGKFLQTPRGTFELKHFFAVRL
                     EGASVSGQAVKAMVRRLIDAEPAGRPLADEAIAGLLSRQGVNIARRTVAKYREQLDIA
                     PARERRRLGARQPQLARVG"
     gene            complement(4019..4651)
                     /locus_tag="QEL58_003241"
     CDS             complement(4019..4651)
                     /locus_tag="QEL58_003241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010485918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDS1677677.1"
                     /translation="MRVLIVDDHTLVRAGLARLLQGFADVQLVAEASNAEQALQLALQ
                     HAPDVVLMDLSLPGRTGLEALSDIRLRAPGTRVVMMTMHDDAAHVRDALDRGAVGFVV
                     KDAAPQELELALRAAHAGQVFLSPQISAKMLAPMLGREKPTGIAALSPRQREILRHIG
                     KGESNKEIAADLGISVKTVETHRARMMESLGCRRANDLLLLAARHQHELE"
     gene            complement(4744..5322)
                     /locus_tag="QEL58_003242"
     CDS             complement(4744..5322)
                     /locus_tag="QEL58_003242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HDS1677678.1"
                     /translation="MTQLPTTSLHHPAESELFDETLSCELALPAEFQPGSAAGRTSSA
                     EGLLRSLALVEDSRVDEHDDRNEASLQLQRLEAKLDLAMVLLGRLVRQQGQELTLRPV
                     RWSRRGIRLQLGPRSGATPGQAGLVRLQPSDWLPDHIDLPVEVIAEAADGGGGHYLWL
                     RFQRLGDGLEMAMERHLFRLHRRQVAEARRAR"
     gene            complement(5319..5612)
                     /locus_tag="QEL58_003243"
     CDS             complement(5319..5612)
                     /locus_tag="QEL58_003243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677679.1"
                     /translation="MSLHELHAQLDAFEKALGEEALDQADSLLDGHDSALHALLSQPL
                     TAADHAPLSALFERQQNLLGLLRQRRDAVAALMNDGQRSLRAAHAYLQAESLA"
     gene            complement(5609..6025)
                     /gene="fliS"
                     /locus_tag="QEL58_003244"
     CDS             complement(5609..6025)
                     /gene="fliS"
                     /locus_tag="QEL58_003244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019336597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar export chaperone FliS"
                     /protein_id="HDS1677680.1"
                     /translation="MYGSSRQYAEQYRQVGVTSAVADADPHKLVAMLLAGALERVRRA
                     LASLERGDQAGKGKAIGEVCAIVGHLNGSLDHEAGGEIAGNLSALYDYVLQRLTEANL
                     HNDRAALDEALQLLGEIDSAWNAIPHEQRRPAAVAP"
     gene            complement(6154..7572)
                     /gene="fliD"
                     /locus_tag="QEL58_003245"
     CDS             complement(6154..7572)
                     /gene="fliD"
                     /locus_tag="QEL58_003245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar filament capping protein FliD"
                     /protein_id="HDS1677681.1"
                     /translation="MADFGYGGIGSGLDISSIVNQLVAADRKPADNALNLQQSKAKMQ
                     LSSIGTVTSAFDKLKTALTALKATTAFDTRTVTASGKAQPANTEDVLTASVALYDLGT
                     TKAAASNGTHQVEVTSLATAHKLIADTSFPKTDTFGAGTLTLTVGVGDKAKTMNVAVE
                     DGDTLTTIRNKIDAAGRKEGVQATLITSGDNQYLSIAQEKTGAANAIKLEYGGSDPKL
                     GALVGSLKQNTAAADAELTIDGVKVVSASNTVADAVPGLTLNLKVPGKSTVVISTDTA
                     AATKVMQEFVTAYNAAIAAINTETKYDAKTKEAATLTGDAQMRGAASQLRSMMSGVLK
                     ELSADGLDPKVLGLQTRGYPNADGSLVLDTTKFAAALASQPEKIRSAITGDTGGAGTL
                     YTMVDGYVSTTVGKEGAFVARTKGLNTTLDNIDKRRKDLDTRMKGVEERYKKQFIALD
                     SLMGKLQQSNTSLQQQLAQLNR"
BASE COUNT         1123 a         2575 c         2770 g         1478 t
ORIGIN      
        1 cgccatccat ggcgctcacg cccccgcaac cggacccaac ccgcctttga cagttctctg
       61 cgatctgatg gtgggtgccg accgttggcc ggcactgatc ggatggggtc agatcccgtt
      121 gcaacgcaac gggctccgac cccaatggag gcgccattta accggcgtcg gttttctggc
      181 ctggggctgc agggtccagt ggccggaatt ctggcgctgc cggggttcgg aggcccacaa
      241 acaccaacgc ccgggcaagc ccaggcgttc gtgccccctt catgctggaa acgctgttca
      301 gccggccagt tcggcctgct cgcgttcgat gccgtacttg cgcagctttt ccaccagggt
      361 ggtgcggcgc aggccaagca gctgggcggc gtgggcgacc acgccctggg tgcgttccag
      421 tgcttcgttg atcaggccca gttcgatgtt ggccatgtgg ttgcgcagat ccatgccctc
      481 gtcgggcagg gcggccggtg ctgctacacg attgacggcg atgccatgct ccagcgccgg
      541 ctggttgccg ctgcccgggg tatggaacga gaagctgcgc aggtccaggc gttcttcgct
      601 ggcgacggac tgcaccggtg ccggcgcggc cactgctgcc agcgcggcgt cgccccggta
      661 gcgggccggc aggtcctgca cgcgcaccga gccacccggg tgcagcaccg ccaggcgctc
      721 gaccaggttg gtcagttcgc gcacgttgcc cggccattcg tagccggcca gggcctgcag
      781 ggcttctgcg gtgaagcgca cttcgccacg gccggtacgc gccagctgcg cggcgatggt
      841 ttccaccagc gccggcaggt cctcgcggcg ttcgcgcagg gccggcacgt cgatcgggaa
      901 cacgttgagg cggtagaaca gatcctcgcg gaacttgcct tcggcaatgc gcgtttccag
      961 gtcgcggtgg gtcgcggcga cgacgcgcac gttgcagcgg atggtctggt tgccacccac
     1021 gcgttcgaag ctgcgctcct gcagcacgcg cagcagcttg acctgcatcg gtaggctcat
     1081 gtcgccgatt tcatcgagca gcagggtgcc gccctcggcc atttcgaaac ggcccttgcg
     1141 cgcggtgagc gcaccggtga aggcgccctt ttcgtgaccg aacagttcgc tttccagcag
     1201 gtcggccgga atggcgccgc agttgatcgc cacgaacggg ccgtcacggc gcggcgagcg
     1261 ctggtggatg gcgcgcgaca ccacttcctt gccggtaccc gattcgccca gcaccagcac
     1321 ggtggtatcg aacgcggcga cctgctcgat catggtgcgc agttcggtga cggccgggcc
     1381 gttgccggtc ggtccctgct cctgcacggc accggcctgg tgctcggcgt ccaggcgctt
     1441 gaggctggcg cggcgcagca gggcttccat ctgggcatgg cgcagcgggg tctccagcgg
     1501 ccagatgttg gcctcgtgca ggccatgctg ctgcgcgaag gcagcggcat cgccgtcggc
     1561 cagcagcacc ggcggcggca ggctgctgcc gccgagccag tggtacagcg cagtgctggc
     1621 ggcactgtca tccaggctgc cgacgatcac cgccatccag tcgttctggc gctggcggcc
     1681 caggtcgaaa tcggccgcgt cggagaccca gcgcgggttg aagtccatga attccagcag
     1741 ggcaacggtg cgctcggcac gcacggcgtc gttgtccagt acaaggatgc gcgattcgct
     1801 cacgatcgat cctccctgag gccttccagg atcggcatga cttcctggat gtaggacagc
     1861 ttgctgacga agttgtcggc gccggcgcgc agcgcgtgtt cgcggtgctc ggcgtcgtcg
     1921 aagtggctgg cgatcacgat gtacggtgcg tcgtcctgcg acttgatcag gcgggtggcc
     1981 tgcaggccgc ccatttccgg catggccagg tccatcagca ccacctgcgg gcgcagcgtt
     2041 tccgatcgct cgatcgcttc caggccgttg ccagcactgc cgacgatctg cagccagtcg
     2101 atcttgcgga aatggcgcat cgccgcgttg atgaagccct cgtggtcatc gaccagcagg
     2161 accgtaagct tgttcatgtc caacatcctt ttcagcccac ccgggccagc tgcggttgcc
     2221 tggcgccgag ccggcgccgt tcgcgggccg gggcgatgtc cagttgttcc cgatattttg
     2281 cgacggttcg gcgggcaatg ttcaccccct ggcgcgacaa cagcccggcg atcgcttcat
     2341 cggccagcgg ccgaccggcc ggttcggcgt cgatcaggcg gcggaccatg gccttcaccg
     2401 cctggccgga gacgctggcg ccttccaggc gcacggcgaa gaagtgcttc agttcaaagg
     2461 tgccgcgcgg ggtctgcagg aatttgccgg tggtgatgcg cgagacggtg gactcgtgca
     2521 tgccgatttc ctcggccact tccttcaggg tcagcggcgc catggcctcc tcgccacgca
     2581 ccaggaaagc ggcctggcgc tcgacgatta cccgcgcggt ccgcagcagg gtgtcgtagc
     2641 gcatcgacag gccacggctg aaccagcgcg cttcctgcag catctcgcgc agggccgggg
     2701 cggcgtcgtt gctgtcggcc agtgcctgtt cgtactggct gttgatcgac acgcggcggc
     2761 tggtggccgg gttcagcgcc accttccact gcgcgtcggc gtgccaggcg accacgtccg
     2821 gcaccaccac ggcgttgcgc tcgggcagca ggctgtcgcc cgggcgcggt tgcagcgaga
     2881 ggatcaggcg caccgcctcg cgcacgtcgt cgatctcggc gtcgtgctgg cgggcgaggg
     2941 cggggtagtc atgcgcggcc agcgcatcga gcgcgccgtc caggatgcgc gcggccagat
     3001 gacgggcagc caccacgccg tgcaggctgc gcagctgcgc ctgcaggcct tcgcgcaggt
     3061 cctgcgcggc catgccggcc ggttcgccgt gcagcagctg ctggcggatc gcttccacgc
     3121 cgtcggcgtc gatgtcgaac tgggcactgg ccagcagctg cagctggccc agcggtgcct
     3181 gcaggtagcc ggcgtcatcg cagtggtcca gccagaaggc agcaacggcc agcccgcggt
     3241 cgtccatgtc cagcgacagg cgctgcagca cgcgcagctg cggatcggtc gattcaccgg
     3301 cggcgatgcg cgccatgcga tcgtcgtcgc cgtcctgcca gctggtgccg gccacgtccc
     3361 acatcgagga ttccggcagc tcgtcgaacg cggccgtctc cagcgtggtg gtgctggcct
     3421 cggtggcctc ggcggcaggg gcttcggcct cttcgatctc cagcagcggg ttggagtcga
     3481 gcaggcgctg gatttcctgt tccaggtgca ggccatcgag ctgcagcagc cggatcgact
     3541 gcagcagctg cggggtgagg tgaagttgtt ggcccagctg ggtcgagagt gcagccttca
     3601 tcgtggttcc ccggcaccgc tccccggcgc cttgtggaac gcatcttgct tttcatccgg
     3661 cgggggtgga atcggggggt tcctgagggc tttcgtggat ctcccgacag gatgtagggg
     3721 tttcccctac attggcgcgg gatgttgacg aaggtcgtcg ccaagtcatt gattcgtggt
     3781 gccgaaccgg ccgtgttcgc ggggcgccat gtacggattc ctgtcagggc ctgtcagggt
     3841 gacgggattt cgtcgccgat gcggggatgt cgcgggttgg tagagtcgac tgttagtcga
     3901 ctgctctcag atcaggctct ggaaaagtcc cgcgctccgc gcgcagatcg actaactgtc
     3961 gactctaccg acaatcgact ccaccccggc attgtccggc gatcacggtg aggccgattc
     4021 actccagctc gtgctggtgg cgggcggcca gcaacaacag atcattggcg cggcggcagc
     4081 ccagcgactc catcatgcgt gcgcggtggg tctccaccgt cttgacgctg atgccgaggt
     4141 cagcggcgat ttccttgttg ctctcgccct tgccgatgtg gcgcaggatc tcgcgctggc
     4201 gcggcgacag cgcggcgatg ccggtgggct tctcgcggcc cagcatgggc gccagcatct
     4261 tggccgagat ctgcgggctg aggaacacct ggccggcgtg cgcggcacgc agggccagtt
     4321 ccagctcctg cggcgcggca tccttcacca cgaaaccgac cgcgccgcga tccagtgcat
     4381 cgcgcacatg cgcggcatcg tcgtgcatgg tcatcatcac cacccgggta ccgggcgcgc
     4441 gcaggcggat gtcactgagc gcttccaggc cggtgcggcc gggcaacgac agatccatca
     4501 gcaccacatc cggcgcatgc tgcagggcca gctgcagcgc ctgttcggca ttgctggcct
     4561 cggcaaccag ctgcacgtcg gcaaacccct gcagcagccg cgccaggccg gcgcggacca
     4621 gggtgtgatc gtcgacgatg agaactcgca caggcacgca gctggtccgt gtaggggagt
     4681 ccaccttaac ttagctgaac gggcgcgcca agcgttgcct gtcctgcatc gcaatggtgg
     4741 gtttcagcgg gcccgccgag cctcggccac ctggcggcgg tgcaggcgga acaggtgccg
     4801 ctccatggcc atttccaggc cgtcgccgag gcgctggaag cgcagccaga gatagtggcc
     4861 accaccgccg tcggcggctt cggcgatcac ttccaccggc aggtcgatat ggtcgggaag
     4921 ccagtcgctg ggctgcagcc gcaccaggcc ggcctggcca ggcgtggcgc cgctgcgcgg
     4981 gcccagttgc aggcggatgc cgcggcgtga ccagcgcacc gggcgcaggg tcagttcctg
     5041 gccctgctgg cgaaccagcc ggccgagcag caccatcgcc aggtccagct tggcctcgag
     5101 ccgctgcagc tgcaggctgg cctcgttgcg gtcgtcatgc tcgtcaacgc ggctgtcttc
     5161 caccagcgcc aggctgcgca gcaggccttc ggcgctgctg gtacggccgg cggcactgcc
     5221 gggctggaac tcggcaggca gggccagttc gcagctgagc gtttcgtcga acagctcgct
     5281 ttcggcgggg tggtgcagcg acgttgtcgg cagttgggtc atgccagcga ttctgcctgc
     5341 aggtaggcat gcgccgcgcg aagagaacgc tgtccatcgt tcatcagggc cgcgaccgcg
     5401 tcgcggcgct ggcgcagcag gccgagcagg ttctgctggc gttcgaacag tgcgctcagt
     5461 ggcgcgtggt cggccgcggt gagcggctgg ctgagcaggg catgcagggc gctgtcgtgg
     5521 ccgtcgagca ggctgtcggc ctggtcgagg gcttcttcgc ccagtgcctt ctcgaacgcg
     5581 tccagctgcg cgtgcagttc gtgcaggctc atggtgccac cgcggccggg cggcgctgtt
     5641 cgtgcgggat cgcgttccag gcgctgtcga tttcgcccag cagctgcagg gcttcgtcca
     5701 gcgctgcacg atcattgtgc aggttggcct cggtcaggcg ctgcagcaca tagtcataga
     5761 gtgccgacag gttgccggcg atctcgccac cggcctcatg gtccagcgag ccgttgaggt
     5821 ggccgacgat cgcacagact tcgccgatcg ccttgccctt gccggcctgg tcgccacgct
     5881 cgaggctggc cagggcacgg cgcacgcgct ccagcgcgcc agccagcagc atcgccacca
     5941 gcttgtgcgg atcggcatcg gcgaccgcac tggtcactcc cacctggcgg tactgttcgg
     6001 catattgacg gctggaaccg tacattcgtg attctccttg cgcggggtgc cgccgggcga
     6061 tcgaggggat cgttgccggc ggcgcggcga tgattgctgt tgcgtccgtt atcggtgcgt
     6121 tgcacgccaa acttgagcgt tgcgcgtaga ccttcagcgg ttcagctgtg ccagctgctg
     6181 ctgcagcgac gtattgctct gctgcagctt gcccatcagg ctgtccagcg cgatgaactg
     6241 cttcttgtag cgctcttcca cgcccttcat gcgcgtgtcc aggtccttgc ggcgcttgtc
     6301 gatgttgtcc agcgtggtgt tgaggccttt ggtgcgggcg acgaaggcgc cttccttgcc
     6361 gaccgtggtg ctgacatagc cgtcgaccat ggtgtagagc gtgccggcac cgccggtgtc
     6421 gccggtgatg gccgagcgga tcttttcagg ctggctggcc agtgcggcgg caaacttggt
     6481 ggtgtcgagc accaggctgc cgtcggcgtt tggataaccg cgtgtctgca ggcctagtac
     6541 cttcgggtcc aggccgtcgg cggaaagctc cttcagcacg cccgacatca tggaacgcag
     6601 ctggctggca gcaccacgca tctgcgcgtc gccggtcagc gtggccgctt ccttggtctt
     6661 ggcgtcgtac ttggtttcgg tgttgatcgc tgcgatggcc gcgttgtagg cggtcacgaa
     6721 ttcctgcatc accttggtgg cggcggccgt gtcggtactg atcacgaccg tgctcttgcc
     6781 gggaaccttc aggttcaggg tcaggccagg caccgcatct gccaccgtat tgctggcgct
     6841 gaccaccttg acgccatcga tggtcagttc ggcgtccgct gcagcggtgt tctgtttcag
     6901 gctgccgacc agtgcgccca gcttgggatc actgccgccg tactccagct tgatcgcatt
     6961 ggcggcaccg gtcttctcct gggcgatcga caggtactgg ttgtcgccgg aggtgatcag
     7021 tgtggcctgc acgccttcct tgcggccggc ggcatcgatc ttgttgcgga tggtggtcag
     7081 cgtgtcgccg tcctccaccg ccacgttcat ggtcttggcc ttgtcgccca cgccgacggt
     7141 cagcgtcaag gttccggcgc cgaaggtgtc ggtcttcggg aacgaggtgt cggcaatcag
     7201 cttgtgtgcc gtggcgaggg atgtcacctc cacctggtgc gtgccgttgg acgcggccgc
     7261 cttggtcgtg cccaggtcgt acagcgccac cgatgcggtc agcacatcct cggtattggc
     7321 gggctgcgcc ttgccgctgg cggtcaccgt gcgggtatcg aaggcggtgg tggccttcag
     7381 cgcggtcagt gcagtcttca gcttgtcgaa ggccgaggtg acggtgccga tcgacgacag
     7441 ctgcatcttg gctttggact gctgcaggtt cagtgcattg tcggccggct tgcggtcggc
     7501 tgcgaccagc tggttgacga tgctggagat atccagtccc gagccaatgc caccgtatcc
     7561 aaagtctgcc acgtcgtttc tcctggtata cgggcctggc cgtcgtgcgg tggcccgtcg
     7621 tcaacgaaaa tagcggcctg tgccgctggg tcttgaggac ttcgttgatg catgcgccgt
     7681 gccaatgctc tggcgcgggt tctggcacgc aggttgcagg agggttgggg cagggtgcgg
     7741 ggaggttcac cgcgggctgc cgggagtctg caaaaaaccc tcccccaatg caggggaggg
     7801 atcaggctac tgacaatcgg ggggagacga agccgcccgg tacgtacagt caaaggtaca
     7861 gcgctgaaag agaggtccgc aggagcgggc gatgccaagc cggttcggga gggttcccgg
     7921 gccgggcatg gcccgcgcct tcgtgc
//
LOCUS       DAOKIP010000184         7887 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.184,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000184 DAOKIP010000000
VERSION     DAOKIP010000184.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 7887)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7887)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7887
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.184"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            <1..1048
                     /locus_tag="QEL58_003246"
     CDS             <1..1048
                     /locus_tag="QEL58_003246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014645582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="NADH:flavin oxidoreductase/NADH oxidase"
                     /protein_id="HDS1677682.1"
                     /translation="IVIAPMCQYSAEDGRASDWHAMHLGNLAQSGAGLLILEATAVEP
                     RGRISWADLGLWDDGTEAALAQVLTSVRRWSPMPLGIQLGHAGRKASVRRPWDGGGQL
                     PADDARGWATVAPSPLPFHAADPAPQELDEAGIAEVIAAFAASAVRAERLGFELIELH
                     AAHGYLLHQFLSPLSNRRTDGYGGSLPNRLRLLVEVFDAVRAAVSDKVAVGVRISASD
                     WVDGGWDLVQSEALAQVMDARGCNFLHVSSGGLDERQKITVGPGYQVPFAAAIKAKVR
                     MPVIAVGMITEPEQAESILRHRHADAVALARGILYDPRWPWHAAAALRDSVEPAPQYL
                     RCEPRDARGVFKAR"
     gene            complement(1051..1962)
                     /locus_tag="QEL58_003247"
     CDS             complement(1051..1962)
                     /locus_tag="QEL58_003247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDS1677683.1"
                     /translation="MNLLQLIRSFTRTAETGSIAAAARTLGISATAVGQNINRLEAHL
                     GVRLLNRSTRQLALSEAGALYLAQVRHIEADLARAQAMVTAGDIEPAGPLRIASSSAF
                     GRHVLAPLLPSLQQRYPQLQLELRLSDRAVQHGPEAVDASIRIGAQLEDGVVARQLAR
                     IPFVFCAAPAYLKAHGTPQQPSELGSHRGLLHRFPTDGRPLRWCLLKDGQRVDAALPP
                     SMVCDDIDALAELAAAGAGITRLAAFVAEPYLRDGRLQAVFGADTAWRPEPMEVYFCV
                     SDRRDFTAKIRALFEHLQAGMAPAWQV"
     gene            2077..2928
                     /gene="purU"
                     /locus_tag="QEL58_003248"
     CDS             2077..2928
                     /gene="purU"
                     /locus_tag="QEL58_003248"
                     /EC_number="3.5.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formyltetrahydrofolate deformylase"
                     /protein_id="HDS1677684.1"
                     /translation="MRPDSILTLSCPDRTGIVYRVSGLLFDHGCNILDAQQFGDEESG
                     RFFLRVHFDRDASLPLDTVHAAMAALAADYGMDWQLHDGRRRARLLVLVSKQGHCLND
                     LLFRAHSGQLKVDIAAVASNHADFAPLAASYQVPFHHLPVNADTRAVQEQQIIDLVER
                     ERIDLVVLARYMQILSPTLCRALAGRAINIHHSFLPSFKGAQPYHQAHARGVKIIGAT
                     AHYVTEDLDEGPIIEQDVARVDHAMAPRELVRLGSDTESLVLARAVRRHVEHRILLNG
                     HRTVVFR"
     gene            complement(2977..3603)
                     /gene="pncA"
                     /locus_tag="QEL58_003249"
     CDS             complement(2977..3603)
                     /gene="pncA"
                     /locus_tag="QEL58_003249"
                     /EC_number="3.5.1.-"
                     /EC_number="3.5.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012509761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional nicotinamidase/pyrazinamidase"
                     /protein_id="HDS1677685.1"
                     /translation="MTALPADVALLVIDLQPDFMPGGALACDQGDALVAPIAALLAQR
                     HYRTVVATQDWHPADHASFASQHPGKRPFETILLHAQPQTLWPDHCVQGSAGAALHPG
                     VDWSVADLILRKGTRQQVDSYSAFRENHGPDGERPPTGLAGWLHERRIREVHVCGLAR
                     DYCVLWSAQDAVKSGFKVKFLWELTKPVTEANDAMVREALGKAGIAVA"
     gene            complement(3659..4330)
                     /locus_tag="QEL58_003250"
     CDS             complement(3659..4330)
                     /locus_tag="QEL58_003250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005411939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="epoxyqueuosine reductase QueH"
                     /protein_id="HDS1677686.1"
                     /translation="MTELQRPTLTLPADGKRLLLHSCCAPCSGEVMEAITASGIDYAI
                     FFYNPNIHPVKEYELRKQENIRFAEQHDIPFIDCDYDTDNWFSRARGMENEPERGIRC
                     TMCFDMRFERTALYAHEHGYDTISSSLGISRWKNMAQINDCGIRAASRYEGLQYWDYN
                     WRKGGGASRMIEISKREQFYQQEYCGCVYSLRDANRHRRENGRERIKIGLLYYGQDAE
                     TPQGD"
     regulatory      complement(4505..4720)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00174"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="cobalamin riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="adenosylcobalamin"
                     /db_xref="RFAM:RF00174"
     gene            4875..6722
                     /locus_tag="QEL58_003251"
     CDS             4875..6722
                     /locus_tag="QEL58_003251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010969699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HDS1677687.1"
                     /translation="MKGGITSGIVYPNAVLALAREYRFKSIGGTSAGAIAAAVAAAAA
                     CGDRRQQAGEHLPGDAGYGGLSAVSAQLSRRGFIYSLFQPARGARAAYRLLVVLTGSA
                     RLPHKLLCLAVAVFEIAPLEVLVSLALLLGLGWWGGGWSGVAATLLPSLLCAYGAGVA
                     GAALRVARVARRNLLGLCSGLGRDAHTPALTEWLHACLQQLSGKPLDAPLTFADLHDA
                     PRYPGEPDSPHAISLQMITTCVSHNEPRTLPLGGAQFWFLREEFEQLFPASVVQWLVQ
                     QAGPPLEVEGRQYYHLPQGPQLPVLVATRMSLSFPLLISAVPLHEPSRRERRCEPTAP
                     AADAEHNVADSMEGLTSAGQTCGPVITAFRICWFSDGGISSNFPIHLFDAALPRWPTF
                     AINLVYPQHAEDVSHGGSGRQALEHAVFLPTENRHGWQRTYQSIATPLAAAELGRFLF
                     AVVATMQNWRDLLQARAPGYRDRIVHVSLQGDEGGMNLDMPQEVLTRIADKGSLAGAR
                     FCSFSFDNHYWIRWRNLASAYQRYTLEVARTDDPAQQVLAYRAAYSMVASGQPAPPSY
                     KLGSEDKRQASQQLWGLMVEQGRSWDDLGPDLTDGAPRPLPQMKVTPIY"
     gene            complement(6796..7749)
                     /locus_tag="QEL58_003252"
     CDS             complement(6796..7749)
                     /locus_tag="QEL58_003252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004136564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1028 domain-containing protein"
                     /protein_id="HDS1677688.1"
                     /translation="MPLLRSCVALLLAAVAAPAWATFSIVACNEAGDCGVAVATHNLA
                     VGGVGVPWAQARVGAVASQFETNPTYGSKGLTLLGKGRTPAQVLKQLLDEDGDFDGTT
                     LAERQVGLVSARGGNAQYTGATARQASWAGAQGEGMLSVQGNGLAGPEVLAAMQRSFE
                     ESRGALAARLLAALEAGQAAGGQRSGQWSAALLVRTPGGDWQDTDLRVDADPRAVARL
                     RELYDMRLSNDAIIRAEQRWEKGDVAAARAALATALSLAHGWDRTWARAARLAMRQGD
                     AALAREYLAGLRTLNPGWVKQELALPLYAPLQGDAVVEPWR"
BASE COUNT         1194 a         2744 c         2700 g         1249 t
ORIGIN      
        1 catcgtgatc gcgccgatgt gccagtactc cgccgaagat ggccgcgcca gcgactggca
       61 cgccatgcac ctgggcaacc tggcgcagtc cggcgccggc ctgctgatcc tggaagccac
      121 cgcggtcgag ccgcgcggtc gcatcagctg ggccgacctg ggcctgtggg atgacggcac
      181 cgaggcggcg ctggcgcagg tgctgaccag cgtccgccgc tggtcgccga tgccgctggg
      241 catccagctg ggccatgccg gccgcaaggc ctcggtgagg cgaccgtggg acggcggtgg
      301 tcagctgccg gccgacgatg cacgtggctg ggccacggtg gcgccgtcgc cgctgccgtt
      361 ccacgccgcc gatccggcac cgcaggaact ggacgaggcc ggcatcgccg aggtcatcgc
      421 cgcctttgct gccagcgcgg tgcgcgccga gcgcctcggt ttcgagctga tcgaactgca
      481 cgccgcacac ggctacctgc tgcaccagtt cctgtcgccg ctgagcaacc gccgcaccga
      541 tggctacggc ggctcgctgc cgaaccgcct gcggctgctg gtggaagtat tcgacgcggt
      601 gcgtgcggcg gtctccgaca aggtcgccgt aggcgtgcgc atctccgcca gcgactgggt
      661 cgacggcggc tgggacctgg tgcagagcga ggcgctggcg caggtgatgg acgcgcgtgg
      721 ctgcaacttc ctgcacgtct ccagcggcgg cctcgacgaa cgccagaaga tcaccgtcgg
      781 cccgggttac caggtgccgt tcgcagcggc gatcaaggcc aaggtgcgca tgccggtcat
      841 cgcggtaggc atgatcaccg agcccgagca ggccgaatcg atcctgcgtc atcgccacgc
      901 cgatgcggtg gcgctggcac gcggcattct ctacgacccg cgttggccgt ggcatgccgc
      961 cgccgcgctg cgcgacagcg tggaaccggc gccgcagtac ctgcgctgcg agccgcgtga
     1021 tgcgcgcggc gtattcaagg cacgctgagt tcacacctgc caggccggcg ccatgccggc
     1081 ctgcaggtgc tcgaacagcg cgcggatctt ggcggtgaag tcgcggcggt cgctgacgca
     1141 gaaatagacc tccatcggtt ccggccgcca cgcggtgtcg gcgccgaaca ctgcctgcag
     1201 gcggccgtcg cgcaggtatg gctcagccac gaacgccgcc agccgggtga tgcctgcacc
     1261 cgcggcagcc agctcggcca gcgcatcgat gtcatcgcag accatgctcg gcggcaacgc
     1321 cgcgtccacg cgctggccgt ctttcagcag gcaccagcgc agcggccggc cgtcggtggg
     1381 gaagcggtgc agcaggccgc gatgactgcc cagttccgag ggttgctgcg gcgtgccgtg
     1441 cgctttcagg taggccggcg cggcgcagaa cacgaacgga atgcgtgcca gctgacgcgc
     1501 gaccacgcca tcttccagct gcgcaccgat gcggatgctg gcatccaccg cttccggccc
     1561 atgctgcacg gcgcgatcac tcaggcgcag ctccagctgc agctgcgggt agcgttgctg
     1621 cagcgagggc agcaacggcg caagcacgtg gcggccgaag gcgctgctgc tggcgatgcg
     1681 caggggcccg gccggttcga tgtcaccggc ggtgaccatc gcctgcgcgc gcgccaggtc
     1741 ggcttcgata tggcgtacct gcgccaggta cagcgcgccg gcctcgctga gcgccagctg
     1801 gcgcgtgctt cggttcagca gccgtacgcc cagatgcgcc tccagccggt tgatgttctg
     1861 gccgacggcg gtggcgctga tgccaagcgt gcgggccgca gcggcaatgc tgccggtctc
     1921 tgcggtgcgg gtgaagctgc ggatcagttg caacaggttc atgaccgacc agcttgccat
     1981 gcggaagccc aagtatcgct tgggactgaa ccaagccgtt cggttgcaac ggtgaccatc
     2041 gatccgtcgg gccgggcgct gccctacact cgggcgatgc gccccgattc catcctcact
     2101 ctgtcctgcc ccgaccgtac cggcatcgtc taccgcgtgt ccggcctgtt gttcgaccac
     2161 ggctgcaaca tcctcgacgc ccagcagttc ggcgatgagg aaagcggccg cttcttcctg
     2221 cgcgtgcact tcgaccgcga cgccagcctg ccgctggaca cggtgcatgc cgcgatggcc
     2281 gcgctggccg ccgattacgg catggactgg cagctgcatg atggccgtcg ccgcgcgcgc
     2341 ctgctggtgc tggtcagcaa gcagggccat tgcctcaacg atctgctgtt ccgcgcccac
     2401 agcgggcagt tgaaagtgga tatcgccgcg gtggcgtcca accacgccga cttcgcgccg
     2461 ctggccgcgt cctaccaggt accgttccac cacctgccgg tgaacgcgga cacgcgtgca
     2521 gtgcaggaac agcagatcat cgatctggtc gagcgcgaac gcatcgacct ggtggtgctg
     2581 gcgcgctaca tgcagattct ctcgcccacg ctgtgccgcg ccctggctgg ccgcgcgatc
     2641 aacatccacc acagcttcct gcccagcttc aagggtgcgc agccgtatca ccaggcgcac
     2701 gcgcgcgggg tcaagatcat cggcgccacc gcgcactacg tcaccgagga tctggacgaa
     2761 ggcccgatca tcgaacagga cgtcgcgcgc gtggaccatg ccatggcgcc gcgtgagctg
     2821 gtgcggctgg gcagtgacac cgaatcgctg gtgttggcgc gtgccgtgcg ccggcatgtc
     2881 gagcaccgca tcctgctcaa cgggcaccgc acggtcgtgt tccggtaacc aaccatcccg
     2941 cgtccaccgg gcatggcccg gcactaccat tgtgggtcag gcgaccgcga tcccggcctt
     3001 gcccagcgcc tcgcgcacca tcgcgtcgtt ggcctcggtc accggcttgg tcaactccca
     3061 cagaaacttc accttgaagc cggacttcac cgcatcctgc gcgctccaca gcacgcagta
     3121 atcgcgggcc aggccgcaca catgcacttc gcggatgcgg cgctcgtgca gccagccggc
     3181 caggccggtt ggcggtcgtt cgccgtcagg gccgtggttc tcgcggaagg cgctgtacga
     3241 atccacctgt tggcgcgtgc ccttgcgcag gatcaggtca gctaccgacc agtccacacc
     3301 cgggtgcagg gcggcaccgg cgctgccctg cacgcagtgg tcaggccaca gggtctgcgg
     3361 ctgtgcgtgc agcaggatgg tctcgaacgg gcgcttgccg gggtgctggc tggcgaacga
     3421 agcgtggtcg gccgggtgcc agtcctgggt ggccaccacc gtgcggtagt ggcgctgcgc
     3481 cagcagcgcg gcaatcggtg ccaccagcgc atcgccctgg tcgcaggcca gcgcgccacc
     3541 cggcatgaag tccggctgca ggtcgatcac cagcagggcg acatcggcgg gcagggcggt
     3601 catggcaggt ccggcacaac ggaaggggcg accagcgtgg ccgccccatg cccacacgtc
     3661 aatcgccctg cggcgtctca gcgtcctgcc cgtagtacag caggccgatc ttgatccgct
     3721 cgcggccgtt ctcgcggcgg tggcggttgg catcgcgcag cgagtacacg cagccgcagt
     3781 attcctgctg gtagaactgc tcgcgcttgc tgatctcgat catgcggctg gcaccgccgc
     3841 ccttgcgcca gttgtagtcc cagtactgca ggccttcata gcgcgaggcg gcgcggatgc
     3901 cgcagtcgtt gatctgcgcc atgttcttcc agcgcgagat gcccagcgac gaactgatgg
     3961 tgtcgtagcc atgttcatgc gcgtacagcg cggtgcgctc gaaacgcatg tcgaagcaca
     4021 tcgtgcagcg gatgccgcgc tcgggctcgt tctccatgcc gcgcgcgcgg ctgaaccagt
     4081 tgtcggtgtc gtagtcgcag tcgatgaagg ggatgtcgtg ctgctcggcg aagcggatgt
     4141 tctcctgctt gcgcagctcg tattccttca ccggatggat gttggggttg tagaagaaga
     4201 tcgcgtagtc gatcccggag gcggtgatcg cctccatcac ttcgccggag cagggcgcgc
     4261 agcacgagtg cagcagcagg cgcttgccgt cggccggcag ggtcagggtg gggcgttgga
     4321 gctcggtcat cgtcaggtac cgcatggacc gccggcaacg gcggtggccc atgcatcagc
     4381 gcgtgggaag cagatctggg cagctaccgg ggaaaggacg cgcgcggccg cgccgcctgc
     4441 acgcgcagga caacgacggc cccggcaccc tccccgcgga gagtccaggt cgagtcaggg
     4501 gacggtcgtg tcccccggcc ggggccggta ttcgggctga tggacacggg ccgcaaccca
     4561 cctactaccc gccgcttccc aggcgcgagc ccagtgctgt tggcaggatt cgtttccatt
     4621 caccgctgcg gggcagctcc ggaatgggcg cgccaggcgc cttcaccgga ttcccgttta
     4681 aatccctgcc gccatacagg ccacggcagg gataccttcg gcgtgtgcac ggtggacccg
     4741 ttggccgcga tggtcaaggg cccagcaccc tgcagtgctg tggcccactt ctcaggctgt
     4801 gagagcgcct cttgcgatac tggacaccgg cagacgggag gtggttcgtg gcggacaagt
     4861 actgcgatct ggtcatgaag ggcggtatca ccagcggcat cgtgtacccc aatgcggtac
     4921 tggcgctggc ccgcgagtat cggttcaaga gcattggcgg cacctcggcc ggcgccatcg
     4981 ccgccgcggt ggcggccgcg gcggcgtgtg gcgaccgccg ccagcaggcg ggcgaacacc
     5041 tgcccggcga cgccggttat ggcgggctgt cggcagtgtc ggcccagctg tcgcggcgcg
     5101 gcttcatcta cagcctgttc cagccggctc ggggggcacg cgcggcctac cggctgctgg
     5161 tggtgctgac cggcagcgcc cgcctgccgc acaagctgct gtgcctggcg gtggccgtat
     5221 tcgagatcgc gccgctggag gtgctggtgt cgctggcgct gctgctcggc ctgggctggt
     5281 ggggcggcgg ctggagcggg gtggcggcca ccctgctgcc gtcgctgctg tgtgcctacg
     5341 gggccggcgt ggccggtgcc gcgctgcggg tggcgcgggt ggcacggcgc aacctgctgg
     5401 gcctgtgcag cggactcggc cgcgatgcgc acacgcccgc cctcaccgag tggctgcacg
     5461 cgtgcctgca gcagctgtcg ggcaagccgc tggatgctcc gttgaccttc gccgatctgc
     5521 atgacgcgcc gcgctacccc ggcgagccgg acagcccgca tgcgatcagc ctgcagatga
     5581 tcaccacctg cgtgtcgcac aacgagccgc gcacgctgcc gctgggcggc gcgcagttct
     5641 ggttcctgcg cgaggagttc gagcagctgt tcccggccag cgtggtgcag tggctggtgc
     5701 agcaggccgg cccgccgctg gaggtggagg ggcgccagta ctaccacctg ccgcagggcc
     5761 cgcagctgcc ggtgctggtg gccacgcgga tgagcctgag tttcccgttg ctgatcagcg
     5821 cggtaccgct gcatgagccc tcgcgccgcg aacgacgctg cgaaccgacc gcaccggcgg
     5881 ccgatgcgga gcacaacgtg gccgacagca tggaagggct caccagcgcc gggcagacct
     5941 gcggtccggt catcaccgct ttccgcatct gctggttctc cgatggcggc atcagcagca
     6001 acttcccgat ccacctgttc gatgcggcgt tgccacgctg gccgaccttc gccatcaacc
     6061 tggtctaccc gcagcatgcc gaggatgtga gccatggcgg cagcggccgc caggcgctgg
     6121 agcatgcggt gttcctgccc accgagaatc gccacggctg gcagcgcacc taccagtcga
     6181 tcgccacgcc gctggcggcc gccgaactgg ggcgcttcct gttcgcggtg gtggcaacca
     6241 tgcagaactg gcgcgacctg ctgcaggcgc gcgcaccggg ctaccgcgat cgcatcgtgc
     6301 acgtcagcct gcagggcgac gagggtggca tgaacctgga catgccgcag gaggtgctca
     6361 cccgcatcgc cgacaagggc agcctggccg gtgcacgttt ctgttcgttc tcgttcgaca
     6421 accactactg gatccgctgg cgcaacctgg cctcggccta ccagcgctac acgctggaag
     6481 tggcgcgcac cgatgacccg gcgcagcagg tgctggccta ccgcgcggcc tattcgatgg
     6541 tcgccagtgg ccagccggca ccgccgtcgt acaagctggg ctcggaagac aagcggcagg
     6601 cctcgcagca gttgtggggc ttgatggtgg aacagggccg cagctgggac gacctcggcc
     6661 ccgaccttac cgacggcgca ccgcgcccgc tgccacagat gaaggtgacg ccgatctatt
     6721 gatcttcgcc gcagccgatt gaacggttct ggtgggtgcc gaccttggtc ggcacgatcc
     6781 gccccctgcg gtgcgtcaac gccacggctc caccaccgca tcaccctgca acggcgcata
     6841 caacggcagc gccagttcct gtttcaccca tcccggattg agcgtacgca ggccagccag
     6901 gtattcgcgg gcgagcgctg catcgccttg gcgcatggcc aggcgcgcgg cgcgcgccca
     6961 ggtgcggtcc cagccgtgcg ccagtgacaa cgcggtggcc agcgccgcac gtgcagcggc
     7021 cacatcgccc ttttcccagc gttgctcggc acggatgatc gcgtcgttgg acagtcgcat
     7081 gtcgtacagc tcgcggagcc ttgccacggc gcgcggatcg gcatccacgc gcagatcggt
     7141 gtcctgccag tcaccgccgg gcgtgcgtac cagcagcgcc gccgaccact gcccgctgcg
     7201 ctgaccgccc gcggcctgac cggcttccag cgccgccagc aggcgcgctg ccaacgcacc
     7261 gcgtgattct tcgaagctgc gttgcatggc cgccagcacc tcgggcccgg ccaagccatt
     7321 gccctgaaca ctcagcatgc cctcaccctg cgcaccggcc cagctggcct ggcgggcggt
     7381 ggcgccggtg tactgcgcat tgccgccgcg cgcactgacc aggcccacct ggcgttcggc
     7441 gagggtggtg ccatcgaaat caccgtcttc gtccagcagc tgtttgagca cctgcgcagg
     7501 cgtgcggccc ttgcccagca gcgtcaggcc cttcgagcca taggttggat tggtctcgaa
     7561 ctggctggcg accgccccca ccctggcctg cgcccacggc acccccacgc caccgactgc
     7621 cagattgtgc gtagccaccg ccacgccgca gtcaccggcc tcgttgcagg ccacgatgga
     7681 aaaggtcgcc cacgccggtg cagcgacggc agcgagcagc agagccacac aggaacgcaa
     7741 cagaggcatg gtcatctcca gggagggcat cccgattggg atgcagccta cgcacgaaag
     7801 gtttagtaga tccacgccat gcgtggatct accgtgtcga ccaaggtcga cacccaccag
     7861 gagcaggtca tgccatccag acagatc
//
LOCUS       DAOKIP010000185         7818 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.185,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000185 DAOKIP010000000
VERSION     DAOKIP010000185.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 7818)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7818)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7818
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.185"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(61..1611)
                     /locus_tag="QEL58_003253"
     CDS             complement(61..1611)
                     /locus_tag="QEL58_003253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BCCT family transporter"
                     /protein_id="HDS1677689.1"
                     /translation="MSSLAHPKRSPLRLNRFVFFSSSVSIGILGLLTVLYPEGSEHWL
                     QWAQAEVSAAFGWWYMLLIVLCLGFVLWLAFSPYGRIRLGHNEESPAFGYVPWVSMLF
                     SAGIGIALLYYGAYEPLDHFLNPPGQPGGTVAAGREAMVLTFLHWGLHGWALYALVGV
                     ALGYFAYRRDLPLALRSALYPIFGERIHGRIGDMVDGFGILATLISMVTNLGIGALVV
                     QSGLVYLFHIPDTPQVLVAIVLVMMVVATIGVVAGVEKGIAWLSNLNVRLLCGLLLFV
                     LVTGPTLHLFDGLIQNTGDYLGAFVRKSFDMYLNDPKGREWMGSWTLFYWAWWIAWAP
                     FVGLFVARISRGRTIREVIMGVLLIPLGFTLAWLSIFGNTAIDLVLNHGQAVLGEVAQ
                     HDAAMTLFKLLEYLPAAPYVAGAAVVIGFVLFLTPVDSGTLMIANLCTRRVDDGVEDG
                     HDAPIWLRVFWAAGITVASVGLLLAGNFSAMQTAVVLCGLPFSFTLAFYMWGLLKALR
                     TDPDAPRR"
     gene            1782..2372
                     /gene="betI"
                     /locus_tag="QEL58_003254"
     CDS             1782..2372
                     /gene="betI"
                     /locus_tag="QEL58_003254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005416394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator BetI"
                     /protein_id="HDS1677690.1"
                     /translation="MPKKGVEPVRREQLIRATFQTIDEIGMADATVATIAKKAGLSSG
                     IVAHYFGDKDGLLNAAMRQILRELKDAVARYRADVGDDPRDQLRAIVDGNFDDSQING
                     TAMRVWLTFWAASMHQPELARLQRANDQRLFSNLCHQFNRLLPHPQARLAARGLAAMI
                     DGLWLRGSLVGGQFNAEKSRRIAYGYIDFQLQAVAL"
     gene            2412..3884
                     /gene="betB"
                     /locus_tag="QEL58_003255"
     CDS             2412..3884
                     /gene="betB"
                     /locus_tag="QEL58_003255"
                     /EC_number="1.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="betaine-aldehyde dehydrogenase"
                     /protein_id="HDS1677691.1"
                     /translation="MTTLPVQQLYIHGQRVDATSGKTFKSVNPATGEVIAEVQVASQA
                     DVERAVQSAAEGQKVWAAMTAMERSRILRRAVEILRERNDELAHLETLDTGKALAETT
                     TVDIVTGADVVEYYAGLATAIEGIQLPLRESSFFYTRREPLGVVAGIGAWNYPIQIAM
                     WKSAPALAAGNAMVFKPSEVTPLTAIRLAEIYTEAGVPAGVFNVVQGPGREIGQWLTE
                     HPVIEKISFTGGVATGKKVMASAASSSLKEVTMELGGKSPLVICDDADLDRAADIAVM
                     ANFFSSGQVCTNGTRVFVPRSMLAAFEAAVVERVKRIRIGDPMAAETNFGPLTSFPHM
                     ENVLRYIESGKAEGARLLTGGGRATEGALANGAYVLPTVFSDCRDDMTIVREEIFGPV
                     MSILAYDDEDEVVRRANDTTFGLAAGVVSKDVSRAHRIIHRLEAGICWINTWGESPAE
                     MPVGGYKESGVGRENGISTLGHYTRIKSVQVELGDYASVF"
     gene            3986..5668
                     /gene="betA"
                     /locus_tag="QEL58_003256"
     CDS             3986..5668
                     /gene="betA"
                     /locus_tag="QEL58_003256"
                     /EC_number="1.1.99.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010482497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="choline dehydrogenase"
                     /protein_id="HDS1677692.1"
                     /translation="MSTHNEYDYIIIGAGSAGNVLATRLTEDADVSVLLLEAGGPDYR
                     LDFRTQMPAALAFPLQGKRYNWAYKTDPEPFMNNRRMDCGRGKGLGGSSLINGMCYIR
                     GNAMDYDNWASMPGLEDWTYLDCLPYFRKAETRDIGANDYHGGDGPLRVTTPKAGNNE
                     LFAAMVEAGVQAGYPRTDDLNGYQQEGFGPMDRTVTPKGRRSSTARGYLDLAKPRPNL
                     TIVTHALTDRILFSGKRAVGVQWLHNDQPQRATARREVLLCGGAIASPQILQRSGVGP
                     ADLLRSLDIDLVHHLPGVGANLQDHLEMYLQYECKKPVSLAPALKLYNQPAIGAEWLF
                     LGTGIGASNQFEAGGFIRSDAEFDWPNLQYHFLPVAINYNGSNPIKAHSFQMHVGSMR
                     SPSRGRIHVRSKDPREHPSILFNYMSHDQDWREFRAAIRITREIFAQPALAPYSGREI
                     SPGSALQTDAQIDAFVREHAETAYHPSCSNKMGHADDPMAVVDGQGRVHGLEGLRIVD
                     ASIMPQVVTGNLNAPTIMMAEKLADVIRGRTPLARSTAPYYKANGAPVRKQG"
     gene            5922..7598
                     /locus_tag="QEL58_003257"
     CDS             5922..7598
                     /locus_tag="QEL58_003257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="long-chain fatty acid--CoA ligase"
                     /protein_id="HDS1677693.1"
                     /translation="MSLDRPWLQSYPKGVPAEIDVNEFHSVASVFDASVAKFRDRPAY
                     SSFGKVITYGETDALVTQFAAYLLGELKLKKGDRVALMMPNCLQYPVATFGVLRAGLT
                     VVNVNPLYTARELKHQLVDAGVSALVVVDNFGDTVQQVIADTPVKHVITTGLGDLLGA
                     KGAIVNFVLKYIKKMVPNYHVKGAVRFKQALKLGSRHALPKVEIDHDDIAFLQYTGGT
                     TGVAKGAMLTNRNLIANMQQASAWLSTSGIEPGKEVIITALPLYHIFALTANGLVFMK
                     FGGCNHLITNPRDMKGFVKELKGTRFTAITGVNTLFNGLLNTPGFDEIDFSSVKFTLG
                     GGMAVQRAVAERWKKTTGVTLVEAYGLTETSPAACINPLTLPEYNGSIGLPIPSTDAC
                     IKDDNGNILPLGEVGELCIKGPQVMKGYWQRPDETEKAIDADGWLHTGDMAKMDEHGF
                     FYIVDRKKDMILVSGFNVYPNEVEDVIAMMPGVLEVAAVGVPDEKSGEVVKVVIVKKD
                     PNLTAEMVKEHARANLTGYKHPRIVEFRKELPKTNVGKILRRELRDTPAQ"
BASE COUNT         1501 a         2719 c         2451 g         1147 t
ORIGIN      
        1 ccggcatggc ctggcgctac tgcgtctccg gcaaagtcgg gatacgtgcc agatgcccgg
       61 tcaccggcgc ggtgcgtccg ggtcggtgcg cagcgccttc agcaggcccc acatgtagaa
      121 cgccagggtg aacgagaacg gcaggccgca cagcaccacc gccgtctgca tcgcactgaa
      181 gttgccggcc agcagcaggc cgacactggc cacggtgatg ccggccgccc agaacacgcg
      241 cagccagatc ggcgcgtcgt ggccatcttc cacgccatcg tcgacgcgac gggtgcacag
      301 gttggcgatc atcagcgtgc ccgaatcgac cggggtcagg aacagcacga agccgatcac
      361 caccgcggca ccggccacgt aaggcgcggc aggcaggtat tccagcagct tgaacagcgt
      421 catcgccgca tcgtgctggg ccacctcgcc cagcaccgcc tggccgtggt tgagcaccag
      481 gtcgatggcg gtattgccga agatcgacag ccacgccagg gtgaagccga gcgggatcag
      541 cagcacgccc atgatcactt cgcggatggt gcggccacgc gagatgcgcg ccacgaaaag
      601 gcccacgaac ggtgcccagg cgatccacca cgcccagtag aacagcgtcc acgagcccat
      661 ccattcacga cccttcgggt cgttgaggta catgtcgaag ctcttgcgca cgaacgcgcc
      721 cagatagtcg ccggtgttct ggatcaggcc gtcgaacagg tgcagggtcg ggccggtgac
      781 cagcacgaac agcagcaggc cgcacagcag gcgcacgttg aggttggaca gccaggcgat
      841 gcccttctcc acacccgcca ccacgccgat ggtggccacc accatcatca ccagcacgat
      901 cgccaccagc acctgcggcg tgtccggaat gtggaacagg tagaccaggc cggactgcac
      961 caccagcgcg ccgatgccga ggttggtcac catcgagatc agcgtggcaa ggatgccaaa
     1021 gccatcgacc atgtcgccga tgcggccatg gatgcgctct ccgaagatcg ggtacagcgc
     1081 cgagcgcagc gccagcggca ggtcacggcg gtaggcgaaa tagcccagcg ccacgcccac
     1141 cagcgcgtac agcgcccagc cgtgcaggcc ccagtgcagg aaggtcagca ccatcgcctc
     1201 gcggccggcg gccacggtac cgccgggctg cccgggcgga ttgaggaagt gatccagcgg
     1261 ctcgtaggcg ccgtagtaca gcagcgcgat gccgatgccg gccgagaaca gcatcgacac
     1321 ccagggcacg tagccgaagg ccggcgattc ctcgttgtgg cccaggcgga tgcggccata
     1381 cggcgagaac gccagccaca gcacgaagcc caggcacagc acgatcagca gcatgtacca
     1441 ccagccgaac gccgccgaca cctcggcctg cgcccattgc agccagtgct cgctgccttc
     1501 gggatagaga acggtgagca gcccgaggat gccgatcgac accgaggaac tgaagaacac
     1561 aaaacggttc aagcgcaggg gcgaacgctt gggatgagcc agggaagaca tggggtcgtc
     1621 tcatcaagtc cgagggagca catgggcggg gccggaccgg taaaccgggc ccatggcgtg
     1681 gggcgcgagc gcatcctagg gtttattgat tgaacgttca atcaataaaa agcataatgg
     1741 cgggcagccc gatccttcgg gtcgcaatcc gtggagagac aatgccgaag aaaggcgtgg
     1801 aaccggtacg gcgcgagcag ctgatccggg ccactttcca gaccatcgac gagatcggca
     1861 tggccgatgc aaccgtcgcc accatcgcga agaaggcagg gctgtccagc ggcatcgtcg
     1921 cccactactt cggcgacaag gacggcctgc tcaatgctgc aatgcggcag atcctgcgcg
     1981 aactgaagga cgccgttgcg cgctaccgcg ccgatgtcgg cgatgacccg cgcgaccagc
     2041 tgcgtgccat cgtcgatggc aacttcgatg acagccagat caacggcacc gccatgcgcg
     2101 tctggctcac cttctgggcc gcgagcatgc accagccgga actggcccgg ctgcagcgcg
     2161 ccaacgacca gcgcctgttc tccaacctgt gccaccagtt caaccgcctg ctgccccacc
     2221 cgcaggcccg cctggccgcc cgcggcctgg ccgcgatgat cgatggcctg tggctgcgcg
     2281 gcagcctggt cggcggccag ttcaatgccg agaagtcccg gcgcatcgct tacggctaca
     2341 tcgacttcca gttgcaggct gtcgcgctat aagcgcttca gcacccgccc ccttccaagg
     2401 agtacgcccc catgaccacc ctgcccgtcc aacagctgta catccacggc cagcgcgtcg
     2461 atgccaccag cggcaagacc ttcaagtcgg tgaacccggc caccggtgag gtgatcgccg
     2521 aagtgcaggt cgccagccag gccgacgtcg agcgcgccgt gcagagcgcg gccgaaggcc
     2581 agaaggtgtg ggccgcgatg accgccatgg agcgttcgcg catcctgcgc cgtgcggtcg
     2641 agatcctgcg cgagcgcaat gatgagctgg cccacctgga aaccctggac accggcaagg
     2701 cgcttgccga gaccaccacc gtggacatcg tcaccggtgc cgacgtggtc gagtactacg
     2761 ccggcctggc caccgccatc gaaggcatcc agctgccgct gcgcgaatcg agcttcttct
     2821 acacccgccg cgagccgctg ggcgtggtcg ccggcatcgg cgcgtggaac tacccgatcc
     2881 agatcgccat gtggaagtcg gccccggccc tggctgccgg caacgcaatg gtgttcaagc
     2941 cgtccgaagt gaccccgctg accgcgatcc ggctggccga gatctacacc gaagccggcg
     3001 tgccggccgg cgtgttcaac gtcgtgcagg gcccgggccg cgagatcggc cagtggctga
     3061 ccgagcaccc ggtgatcgag aagatctcct tcaccggcgg cgtcgccacc ggcaagaagg
     3121 tcatggccag cgcggcttcc tcgtcgctga aggaagtgac catggagctg ggcggcaagt
     3181 cgccgctggt gatctgcgat gacgccgacc tcgaccgcgc cgccgacatc gcggtgatgg
     3241 ccaacttctt cagctccggc caggtctgca ccaacggcac ccgcgtgttc gtgccgcgca
     3301 gcatgctggc cgcgttcgaa gccgccgttg tcgagcgcgt caagcgcatc cgcatcggtg
     3361 acccgatggc tgccgagacc aacttcggcc cgctgaccag cttcccgcac atggaaaacg
     3421 tgctgcgcta catcgaaagc ggcaaggccg aaggcgcccg cctgctgacc ggcggcggcc
     3481 gtgccaccga aggtgcgctg gccaacggcg cctacgtgct gccgaccgtg ttctccgact
     3541 gccgcgatga catgacgatt gtccgcgaag agatcttcgg gccggtgatg agcatcctcg
     3601 cctacgacga cgaagacgaa gtggtgcgcc gtgccaacga caccaccttc ggcctcgctg
     3661 ccggcgtggt cagcaaggac gtcagccgcg cccaccgcat catccaccgc ctggaagccg
     3721 gcatctgctg gatcaacacc tggggtgaat cgccggccga aatgccggtc ggcggctaca
     3781 aggaatccgg cgtcggacgc gagaatggca tctccaccct cggccactac acccgcatca
     3841 agtcggtgca ggtcgagctg ggcgactacg ccagcgtgtt ctgatcggcg cgccctgagc
     3901 gcgccccatc gtccggccac cgtgccgatc cgacattccg ccgggacgcc tgcatgcagc
     3961 gcgccccggc ctgcaggaga caccaatgag cacccataac gagtacgact acatcatcat
     4021 cggcgccggt tcggccggca acgtgctggc cacccgcctc accgaagatg ccgatgtcag
     4081 cgtgctgctg ctggaagccg gtggcccgga ctaccggctc gacttccgta cccagatgcc
     4141 ggccgcgctg gccttcccgc tgcagggcaa gcgctacaac tgggcgtaca agaccgatcc
     4201 cgagcccttc atgaacaacc gccgcatgga ctgcggccgc ggcaagggcc tgggtggctc
     4261 gtcgctgatc aacggcatgt gctacatccg cggcaacgcg atggactacg acaactgggc
     4321 cagcatgccg ggcctggaag actggaccta cctggactgc ctgccgtact tccgcaaggc
     4381 ggaaacccgc gacatcggcg ccaatgacta ccacggtggc gacggcccgc tgcgcgtgac
     4441 cacgccgaag gccggcaaca acgaactgtt cgcggcgatg gtcgaggccg gcgtgcaggc
     4501 cggctacccg cgcaccgacg acctcaacgg ctaccagcag gaaggcttcg gcccgatgga
     4561 ccgcacggtg accccgaagg gccgccgttc cagcaccgcc cgcggctacc tggacctggc
     4621 caagccgcgc ccgaacctga ccatcgtcac ccacgcgctg accgaccgca tcctgttctc
     4681 gggcaagcgt gcggtgggcg tgcagtggct gcacaacgac cagccgcagc gcgccaccgc
     4741 gcgccgcgaa gtgctgctgt gcggcggcgc catcgcctcg ccgcagatcc tgcagcgttc
     4801 gggcgtcggc ccggccgacc tgctgcgcag cctcgacatc gacctggtgc accacctgcc
     4861 gggcgtcggc gccaacctgc aggaccatct ggagatgtac ctgcagtacg agtgcaagaa
     4921 gccggtgtcg ctggccccgg cgctgaagct gtacaaccag ccggcgatcg gcgccgagtg
     4981 gctgttcctg ggcaccggca tcggcgccag caaccagttc gaggccggcg gcttcatccg
     5041 cagcgacgcc gagttcgact ggccgaacct gcagtaccac ttcctgccgg tggcgatcaa
     5101 ttacaacggc tccaacccga tcaaggcgca cagcttccag atgcacgtgg gctcgatgcg
     5161 ctcgcccagc cgcggccgca tccacgtgcg ctccaaggac ccgcgcgaac atcccagcat
     5221 cctgttcaac tacatgtcgc atgaccagga ttggcgcgaa ttccgcgcgg cgatccgcat
     5281 cacccgcgag atcttcgcgc agccggcgct ggcaccgtac agcggccgcg agatttcgcc
     5341 cggcagcgcg ctgcagaccg acgcgcagat cgatgcgttc gtgcgcgagc atgcagagac
     5401 cgcctaccac ccgtcctgct cgaacaagat gggccacgcc gatgatccga tggcggtggt
     5461 cgacggccag ggccgcgtgc acggcctgga aggcctgcgc atcgtcgatg cctcgatcat
     5521 gccgcaggtg gtgaccggca acctcaacgc gccgaccatc atgatggccg agaagctggc
     5581 cgacgtgatc cgcggccgca ccccgctcgc ccgcagcacc gcgccgtact acaaggccaa
     5641 cggcgcaccg gtgcgcaagc agggctgagc agccccagac cggtaggtgc ccaccttggt
     5701 gggcactgat ccaagccccc ctcggaatcc tgtgccgacc aaggtcggca tctaccgttg
     5761 ccgtttccgg atcctgtgcc gaccagggtc ggcacctacc attgccgcct ccgcgaaccc
     5821 ctcttcgcgt tttccctacg gcggggtatg ctgcaatgac cggccattgt cgatacgctc
     5881 agggccggaa cctaatacat cacgattcct ggagggggaa tatgagtctg gatcgtccct
     5941 ggctgcagag ctatccgaaa ggcgttcccg ccgaaatcga cgtcaacgag ttccattcgg
     6001 tcgcctcggt cttcgacgcc tccgtcgcga aattccgcga ccgtcccgcc tactccagct
     6061 tcggcaaggt catcacctat ggtgagaccg atgcgctggt cacccagttc gccgcctacc
     6121 tgctgggcga gctcaagctc aagaagggtg accgcgtcgc cctgatgatg cccaactgcc
     6181 tgcagtaccc ggtggccacc ttcggcgtgc tgcgtgctgg cctcaccgtg gtcaacgtca
     6241 acccgctgta caccgcgcgc gaactcaagc accagctggt cgatgccggt gtcagcgcgc
     6301 tggtggtggt cgacaacttc ggcgacaccg tccagcaggt catcgccgac acgccggtca
     6361 agcacgtgat caccaccggc ctgggcgacc tgctcggcgc caagggtgcg atcgtcaact
     6421 tcgtgctgaa gtacatcaag aagatggtgc ccaactacca cgtcaagggc gcggtccgct
     6481 tcaaacaggc gctcaagctg ggcagccgcc acgcgcttcc gaaggtcgag atcgaccacg
     6541 acgacatcgc tttcctgcag tacaccggcg gcaccaccgg cgtggccaag ggcgcgatgc
     6601 tgaccaaccg caacctgatc gccaacatgc agcaggcgtc ggcgtggctg tccacctcgg
     6661 gcatcgagcc gggcaaggaa gtcatcatca ccgccctgcc gctgtaccac atcttcgcgc
     6721 tgaccgcgaa cgggctggtc ttcatgaagt tcggtggctg caaccacctg atcaccaacc
     6781 cgcgtgacat gaagggcttc gtcaaggagc tgaagggcac ccgcttcacc gccatcaccg
     6841 gcgtcaacac gctgttcaac ggcctgctca acacccccgg cttcgacgag atcgatttct
     6901 cttcggtcaa gttcaccctg ggcggcggca tggcggtgca gcgcgcggtg gccgagcgct
     6961 ggaagaagac caccggcgtc accttggtcg aggcctacgg cctgaccgaa acctcgccgg
     7021 cggcctgcat caacccgctc accctgcccg agtacaacgg ctcgatcggc ctgccgatcc
     7081 cgtccaccga tgcctgcatc aaggacgaca acggcaacat cctgccgctg ggcgaagtcg
     7141 gtgagctgtg catcaagggc ccgcaggtga tgaagggtta ctggcagcgc ccggatgaaa
     7201 ccgaaaaggc catcgacgcc gacggctggc tgcacaccgg cgacatggcg aagatggacg
     7261 agcacggctt cttctacatc gtcgaccgca agaaggacat gatcctggtg tccggcttca
     7321 acgtgtaccc gaacgaggtc gaggacgtca tcgcgatgat gccgggcgtg ctggaagtgg
     7381 ccgcagtcgg cgttccggac gagaaatccg gcgaagtggt gaaggtcgtg atcgtgaaga
     7441 aggacccgaa cctgaccgcc gaaatggtca aggagcacgc gcgggcaaac ctgaccggat
     7501 acaagcaccc cagaatcgta gaattccgaa aagagctgcc gaagaccaac gtcggcaaga
     7561 ttctccgtcg cgagctgcgt gatacgcccg cccagtaagg gtttgcgggc aagcaggcag
     7621 aacaggggcc ccgccggcga cggcggggct ttttcattgc cggaacatgg ccggcccagc
     7681 gcttgcgggc ggttcacgac gggtgcatag aatcagtcgc cgccgcacgt tcagctcgcc
     7741 ccctcactct tctccgtccg ctctgcggtt ggccggacgg tcacacggag aacttccatg
     7801 tccgcagtac gccccatc
//
LOCUS       DAOKIP010000186         7664 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.186,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000186 DAOKIP010000000
VERSION     DAOKIP010000186.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 7664)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7664)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7664
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.186"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            250..1128
                     /locus_tag="QEL58_003258"
     CDS             250..1128
                     /locus_tag="QEL58_003258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005411808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677694.1"
                     /translation="MRSTATGSTVLALVLGLATAPAQAADVVGVAFVHGTGAQTNATQ
                     DYWQPAIIDTVRQGLPNSSNYVVINCDFTQYMWKPEAAGCLANQLTGFIDSRGITQLV
                     VITHSNGGNVMRWILSNPTYDSRYPKIIRTVRRVNALAPSSAGTPLADAVLNGNTFET
                     SLGWLLGYKNDAVRQQQVASMATYNAQNLYGTAGRPALPKPFRAVVGSDVESAVWDSN
                     SYCGGYAANVGLEFTQNWLSSCSDGFLECSSQKAAGTTWFTDKARTQGAEPLSHNQSR
                     RECFGLGTILRNDLAQ"
     gene            1140..2342
                     /locus_tag="QEL58_003259"
     CDS             1140..2342
                     /locus_tag="QEL58_003259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005407484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4785 family protein"
                     /protein_id="HDS1677695.1"
                     /translation="MTIHSTLLASAVLAVLSLSAVQAAQPLQATRAGDQVPAALVAAP
                     LPADESEHAPLSFAWALDPAQPLQAATPYASVSRSYWQQVDGTQLQRGLDLPLTAADA
                     VIQLSPAEGARALPASTLQVRDPAGRSSVARSVDARALQDAGMPVGDGSSMLRTGATS
                     AAGAYTLQSAQAQGRYVVQVLEPNSPLRLEVQASQGQVLAGSSVQLQARLLEDGATTA
                     TLASRRGGLGGEALLVAPDGRSWPQRLLRTTDGSLRAQVRIPADVGTAQGLWELQVFA
                     QADGVLRDGKVAFAVARPTARFSGQATPDPASRQVALPLQVAAAGRYEARGTLYATAR
                     DGQLKPVAQAHAAAWFDGPGAGQLVLPFDQAALPAGFGAPYELRDLQLQDQSRMAPIE
                     SRALALQF"
     gene            complement(2484..3305)
                     /locus_tag="QEL58_003260"
     CDS             complement(2484..3305)
                     /locus_tag="QEL58_003260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014035448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HDS1677696.1"
                     /translation="MTAAAPAAALPPLIELDRATVVRGQVKVLHGLSLRIAQGQHTAL
                     LGPNGCGKSTFIKLITRELYPLAQGDGSVAVKVLGQNRWQVDRLRSQLGIVTGDLSSN
                     LADMPGLTVEQAVLSGFFASYVVPAFREVTADMRTRVGETLAMTGALSLRERAYAELS
                     AGETRRVLIARALVNRPQALLLDEPSTGLDLVAREQLVATMRVLAQQGITLVLVTHHI
                     EEIIPEIERVVLLRDGRVLADGSRAELLRNEPLSAVFGGAITVCEQEGRLTAYAG"
     gene            3457..4659
                     /locus_tag="QEL58_003261"
     CDS             3457..4659
                     /locus_tag="QEL58_003261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005411811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid desaturase"
                     /protein_id="HDS1677697.1"
                     /translation="MPDALMSLLTGGVLGLGWWAMLAVLLVFTQITIFSVTLYLHRSQ
                     AHRGVDFHPVLAHMFRFWLWLTTSMITREWVAIHRKHHAKVETEDDPHSPVTRGIGKV
                     FWHGVELYREARGQRADIEQYGRGTPDDVIERRLYTPHATFGPVLLLAINTVLFGLPG
                     VALWAIQMAWIPFWAAGVVNGLGHWWGYRNYESADTSTNLTPWGFWIGGEELHNNHHA
                     FPSSARFAMRRWEFDIGWSAIRLLQVLRLAKVLRVAPAMDVRPNIAVPDAETLKALLS
                     HRFQAMTDYQRNVFMPALREEAAHAGAKLRRLLPRRLRRGLVNDGRWLKPDSRAQLSE
                     WVAQRPRIRTLVEYRGRLAALLEARGHDAAERLHQLQAWCREAEESGIAALQAYAARL
                     KGYSLVGA"
     gene            4656..4988
                     /locus_tag="QEL58_003262"
     CDS             4656..4988
                     /locus_tag="QEL58_003262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005407487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EF-hand domain-containing protein"
                     /protein_id="HDS1677698.1"
                     /translation="MRAGLGLLLAALLPGAALAQVTDTASYLQRMDRDGDGKVSEAEY
                     VQWMLYAFDRMDRNGDGVLSADELPGGKGRAITREQQRQVIVQRFHRQDANGDGFLDA
                     RELAAPPR"
     gene            5041..5853
                     /gene="mutM"
                     /locus_tag="QEL58_003263"
     CDS             5041..5853
                     /gene="mutM"
                     /locus_tag="QEL58_003263"
                     /EC_number="3.2.2.23"
                     /EC_number="4.2.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012509626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional DNA-formamidopyrimidine
                     glycosylase/DNA-(apurinic or apyrimidinic site) lyase"
                     /protein_id="HDS1677699.1"
                     /translation="MPELPEVETTRRGLAPHLQGRRVHGVILRRADLRWPIPPEVAEL
                     LPGQRIEDIRRRAKYLLLDTAIGSAVLHLGMSGSLRVLPGDTPLRAHDHVDISLDNGR
                     LLRFNDPRRFGSLLWQPAGETHPLLQGLGPEPLDDAFDGDYLFARSRGRSAPVKTFLM
                     DQAVVVGVGNIYAAESLFKAGISPLREAGKISRERYQRLADAVKEILGYAITRGGTTL
                     RDFISPDGAPGYFEQELLVYGRDGLPCPNCGRALKHATIGQRASVWCSHCQR"
     gene            5959..7563
                     /locus_tag="QEL58_003264"
     CDS             5959..7563
                     /locus_tag="QEL58_003264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019338126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucan biosynthesis protein D"
                     /protein_id="HDS1677700.1"
                     /translation="MQRRDFIRNASLALAAFGLPSLPACAASKSGQMGLRRLGQPQPF
                     DFATLKGQARALAQAPYKSHKRVLPGRLEGLDWDQYQSIGYRQDHALWADQPGRFQAK
                     FFHLGLYFHSPVRMFDVVDGKAQELAYDGAAFNYGKSGIKDGELPADLGFAGFRLNTR
                     KDTDRDFAAFLGASYFRAVGKEGQYGQSARGLAIDTGMGKPEEFPDFIAYYLEQPSAD
                     SETIVVYGLLDSPSVAGAYRFAITNGDVLLMDIDSALYPRKAIERLGIAPCTSMYQVG
                     ENDRRMGWDWRPEIHDTDGLSLWTGAGEWIWRPLLNPRNLRFNMFVDRNPRGFGLLQR
                     DRNFDHYQDDGVFYEKRPCLWVEPKGEWGEGSVQLVEIPTVDETFDNIVAFWNPKEKP
                     QPGQELLVGYRLYWGAEPPARPPLAHCVASRTGLGGVVGKKREYFSWRFAVDFEGGEL
                     ASLIDKAEVEAVVEASRGRVEIVSARPLREINGYRAMFDLVPPEGSTEQIDIRLFLRS
                     GGKTLTETWLYQYTPPPAGAPERTLY"
BASE COUNT         1227 a         2596 c         2666 g         1175 t
ORIGIN      
        1 ggagaaaaca tcgcgccatg atcgcagccc ccatacgaca tcgcagtggc catcggtcat
       61 accgccagac ccggcacggt cattgccgcg atatgaaaag cgtcatcgat tggcctcagt
      121 cttctgaatc cgggcgcagc gcacggactt tcacgcgcct gcgccgtgag catcggcaca
      181 acggcaggca ccgggggccg tccagtcaca gccgggtcgg ggggatccgc tgacagaggg
      241 agagacgcga tgcgcagcac cgcaacagga agtaccgtcc tggccctggt cctcgggctg
      301 gcaacagcgc cggcgcaggc cgccgacgtg gtcggcgtgg ccttcgtgca tggtaccggc
      361 gcgcagacca atgccacgca ggattactgg cagccggcca tcatcgacac cgtgcgccag
      421 ggcctgccga acagcagcaa ctacgtggtc atcaactgcg atttcaccca gtacatgtgg
      481 aagccggaag ccgccggctg cctggccaac cagctgaccg gcttcatcga cagccgtggc
      541 atcacccagc tggtggtgat cacccactcc aacggcggca acgtgatgcg ctggatcctg
      601 tccaacccga cctacgacag ccgctatccg aagatcatcc gcacggtgcg cagggtcaac
      661 gcactggcac cgtcttcggc aggcacgccg ctggccgatg cggtgctcaa cggcaacacc
      721 ttcgaaacct cgctgggctg gctgctgggc tacaagaacg acgcggtgcg ccagcagcag
      781 gtggcgagca tggccaccta caacgcgcag aacctgtacg gcactgccgg ccgcccggca
      841 ttgcccaaac ccttccgcgc ggtggtcggc agtgatgtcg aatcggcggt gtgggacagc
      901 aacagctact gcggcggcta tgccgccaat gtcggcctgg agttcaccca gaactggctg
      961 tcgtcctgtt ccgatgggtt cctggagtgc agcagccaga aggccgccgg caccacctgg
     1021 ttcaccgaca aggcgcgcac ccagggggca gagccgctca gccacaacca gagccgacgc
     1081 gagtgcttcg gcctcggcac gatcctgcgc aacgacctgg cccagtgagg gagacgacca
     1141 tgacgatcca ttccaccctg ctcgccagtg ccgtgctggc agtactgtcc ctttccgccg
     1201 tgcaggccgc gcagccgctg caagccaccc gcgcaggcga tcaggtacct gcggcactgg
     1261 tggccgcgcc gctgcctgct gatgaaagcg aacacgcgcc gttgtcgttt gcctgggcgc
     1321 tggacccggc acaaccgctg caggccgcca cgccgtatgc ctcggtcagc cgcagctact
     1381 ggcagcaggt cgacggcacg cagctgcagc gcggcctgga cctgccgctg acggcggccg
     1441 atgcggtgat ccagctgagc ccggccgaag gtgcccgcgc gctgccggcc agcaccctgc
     1501 aggtacgcga cccggccggc cgcagcagcg tggcccgcag tgtcgatgca cgcgcactgc
     1561 aggacgccgg catgccggtg ggtgatggca gcagcatgct gcgtaccggc gcgaccagcg
     1621 cggccggtgc ctacacgttg cagagtgcac aggcgcaggg ccgttacgtg gtgcaggtgc
     1681 tggaaccgaa cagcccgctg cggctggagg tgcaggccag ccaggggcag gtgctggctg
     1741 gcagtagcgt gcagctgcag gcacgcctgc tggaagacgg tgccaccact gcaacgttgg
     1801 catcgcgtcg tggcggcctc ggcggtgagg ccctgctggt cgcaccggat ggccgcagct
     1861 ggccgcagcg cctgctgcgc accaccgatg gcagcctgcg cgcgcaggtg cggatcccgg
     1921 ccgatgtcgg tactgcgcag gggctgtggg aactgcaggt gttcgcccag gccgacggtg
     1981 tgctgcgcga tggcaaggtg gccttcgcgg tggcgcgacc gaccgcgcgc ttcagtggcc
     2041 aggcgacgcc ggacccggcc agccgccagg tggcgctgcc gctgcaggtg gccgccgccg
     2101 gccgctacga ggcgcggggc acgctgtatg ccactgcccg cgatggccag ttgaagccgg
     2161 tggcacaggc acatgcggcg gcgtggttcg atggcccggg tgctgggcag ctggtgttgc
     2221 cgttcgacca ggcggcattg cccgcgggct tcggtgcgcc gtacgaactg cgtgacctgc
     2281 agctgcagga ccagagccgg atggcaccga tcgagtcgcg cgcgctggcg ttgcagttct
     2341 gaggttgcgt gcagcgggcc gggttccggc ccgctgtaac gctccctgta gagccgagcc
     2401 atgctcggat gcttctgctc gcggagaacg gcagtcgagc acggctcgac tctacagacg
     2461 gctacggaaa gcgatgcgtc tgtctaccct gcatacgcgg tcaaccggcc ttcctgttcg
     2521 catacggtga tcgcgccgcc gaacaccgcc gacagcggtt cgttgcgcag cagctcggcg
     2581 cggctgccat cggccagtac gcggccatcg cgcagcagca ccacccgctc gatctcggga
     2641 atgatctctt cgatgtggtg ggtcaccagc accagagtga tgccctgctg cgccagcacc
     2701 cgcatggttg ccaccagctg ctcgcgggcg accaggtcaa gcccggtgga cggctcgtcc
     2761 agcagcagcg cctgcggccg gttgaccagc gcgcgggcga tcagcacgcg gcgggtctcg
     2821 ccggccgaca gctcggcata ggcgcgttcg cgcagcgaca acgcgccggt catcgccagc
     2881 gtctcgccga cgcgtgtacg catgtcggcg gtcacttcgc ggaaggccgg caccacgtag
     2941 ctggcgaaga aaccggacag caccgcctgt tccacggtca gcccgggcat gtcggccagg
     3001 ttgctgctga ggtcgccggt gacgatgccc agctgcgagc gcagccggtc cacctgccag
     3061 cggttctggc ccagcacctt gacggcgacc gagccgtcgc cctgtgccag cgggtacagc
     3121 tcgcgggtga tcagcttgat gaaggtcgac ttgccgcagc cgttggggcc gagcagggcg
     3181 gtgtgctggc cctgcgcgat gcgcaggctg agcccgtgca gcaccttcac ctgtccgcgc
     3241 accacggtgg cgcggtccag ttcaatcaac gggggcagtg ccgcagcggg cgcggcggcg
     3301 gtcatggtgc tggcgcgtgg atcaaggttc gacaactcgg gtccccaact gtgaacggtg
     3361 ccacggatgg cggtgcagat cgccgccgca gggatgcagt ttgcaacgca agcgcccatg
     3421 atgtctgcca tccccgcgcc gaaccggagc gccgtcatgc ccgatgccct gatgtccctg
     3481 ttgaccggtg gtgtgctcgg cctggggtgg tgggccatgt tggcggtcct gctggtcttc
     3541 acccagatca ccatcttctc ggtgacgctc tacctgcacc gcagccaggc ccaccgcggg
     3601 gtcgatttcc acccggtgct ggcccacatg ttccgcttct ggctgtggct gaccacctcg
     3661 atgatcaccc gcgaatgggt ggccatccac cgcaagcacc acgccaaggt ggagaccgag
     3721 gacgatccgc acagcccggt cacccgcggc atcggcaagg tgttctggca cggcgtggag
     3781 ctgtaccgcg aagcccgcgg ccagcgcgcg gacatcgagc agtacgggcg cggcaccccg
     3841 gacgacgtga tcgagcgccg cctgtatacc ccgcacgcca cgttcgggcc ggtgctgctg
     3901 ctggcgatca ataccgtgtt gttcggcctg cccggcgtgg ccctgtgggc gatccagatg
     3961 gcatggatcc cgttctgggc ggccggcgtg gtcaacggcc tgggccactg gtggggctac
     4021 cgcaactatg agtcggccga tacctccacc aatctgacgc cgtggggctt ctggatcggg
     4081 ggcgaagagc tgcacaacaa ccaccatgct ttccccagtt cggcgcgctt tgcgatgcgg
     4141 cgctgggaat tcgacatcgg ctggagtgcg atccgcctgc tgcaggtgct gcgcctggcc
     4201 aaggtgctgc gggtggcgcc ggccatggac gtgcgtccga atatcgccgt gcctgatgcc
     4261 gaaaccctga aggcgctgct gtcgcaccgt ttccaggcga tgaccgacta ccagcgcaat
     4321 gtattcatgc cggccctgcg cgaggaggcc gcccacgccg gggccaagct gcgccgcctg
     4381 ctgccacgcc ggctgcgccg tggcctggtc aacgacggcc gctggctgaa gccggacagc
     4441 cgtgcccagc tcagtgaatg ggtggcacag cggccgcgca tccgcacgct ggtcgagtac
     4501 cgcgggcgat tggccgcgct cctggaagcg cgcggccacg atgcggccga gcgcctgcat
     4561 caactgcagg cctggtgccg cgaggccgag gaaagcggta tcgcggcgtt gcaggcctac
     4621 gccgcacgcc tgaagggcta cagcctggtg ggcgcgtgag ggcagggctc gggcttctgc
     4681 tggctgccct gctgccgggt gctgcgctgg cccaggtcac cgataccgcc agttacctgc
     4741 agcggatgga ccgcgatggc gacggcaagg tcagtgaggc cgagtacgtg cagtggatgc
     4801 tgtacgcctt cgatcgcatg gaccgcaatg gcgatggcgt gctgagcgcc gatgagctgc
     4861 ccggtggcaa gggcagggcg atcacccgcg agcagcagcg gcaggtgatc gtgcagcgct
     4921 tccacaggca ggatgccaac ggcgacgggt tcctggatgc gcgcgagctg gcggcgccgc
     4981 cacgctgagc acgcctgccg gcgccgggcc atgcccggcg ctgaggcgta gaatcgccgc
     5041 atgcctgaac tgcccgaagt cgaaaccacc cgtcgcggcc tggcgccgca cctgcagggg
     5101 cgccgcgtgc atggggtgat cctgcgccgc gccgacctgc gctggccgat tccgccggaa
     5161 gtggccgagc tgctgccggg gcagcgcatc gaggatatcc gccggcgcgc caagtatctg
     5221 ctgctggaca ccgccatcgg cagcgcggtg ctgcaccttg gcatgtccgg cagcctgcgc
     5281 gtgctgcccg gtgatacccc gctgcgtgcg cacgaccacg tcgacatcag cctcgacaat
     5341 ggccgcctgc tgcgcttcaa cgacccgcgc cgcttcggca gcctgctgtg gcagccggcc
     5401 ggggagaccc acccgctgtt gcaggggctg ggcccggagc cgctggacga cgcgttcgac
     5461 ggcgactacc tgttcgcccg cagccgtggc cgcagcgcgc cggtgaagac cttcctgatg
     5521 gaccaggcgg tggtggtggg cgtgggcaac atctacgccg ccgagagcct gttcaaggcc
     5581 ggcatcagtc cgctgcgcga ggcgggaaag atctcgcgcg agcgctacca gcggctggcc
     5641 gacgcagtga aggagatcct ggggtatgcg atcacccgcg gcggcaccac cctgcgcgat
     5701 ttcatcagcc ctgacggcgc accgggctac ttcgagcagg agctgctggt gtacggccgc
     5761 gatgggttgc cctgcccgaa ctgtggccgc gcgctgaagc acgccaccat cggccagcgg
     5821 gccagcgtct ggtgcagcca ctgccagcgc tgagccgggc agccagcggc agctgaacgg
     5881 gcaaggggca tctccgctgc ccgttaacgt ttgtctgcct atgatggccg accttccttc
     5941 tgtgcctgac gcgcctgcat gcaacgacgc gacttcatcc gcaatgcctc cctcgccctg
     6001 gctgcattcg ggctgccgtc cctgcccgca tgcgcggcca gcaagagcgg ccagatgggc
     6061 ctgcgccgcc tgggccagcc gcagccgttc gactttgcca ccctgaaggg ccaggcacgc
     6121 gcgctggcac aggcgcccta caagagccac aagcgggtgc tgccgggccg cctggaaggc
     6181 ctggactggg accagtacca gtcgatcggc taccgccagg accacgcgct gtgggcggac
     6241 cagccaggca ggttccaggc caagttcttc catctgggcc tgtacttcca ttcgccggta
     6301 cgcatgttcg acgtggtcga cggcaaggcg caggagctgg cctatgacgg cgcggcgttc
     6361 aactacggca agagcggcat caaggatggc gaactgccgg ccgacctcgg cttcgccggg
     6421 ttccgcctca acacacgcaa ggataccgac cgcgacttcg ccgcgttcct cggcgccagc
     6481 tacttccgcg cggtcggcaa ggagggccag tatggccagt ccgcacgcgg cctggcgatc
     6541 gacaccggca tgggcaagcc ggaggaattc ccggatttca tcgcctacta cctggaacag
     6601 ccgtcggccg attcggagac gatcgtggtc tatgggctgc tggattcgcc cagcgtggcc
     6661 ggcgcctatc gcttcgccat caccaatggc gacgtgctgc tgatggacat cgacagcgcg
     6721 ctgtacccgc gcaaggccat cgaacgcttg ggcatcgcac cgtgcaccag catgtaccag
     6781 gtgggcgaga acgaccgccg catgggctgg gactggcgcc cggaaatcca cgataccgac
     6841 ggcctgtcgc tgtggaccgg tgccggtgag tggatctggc ggccgttgct gaacccgcgc
     6901 aacctgcgtt tcaacatgtt cgtggaccgc aacccgcgcg gtttcggcct gctgcagcgc
     6961 gaccgcaact tcgaccacta ccaggacgat ggcgtgttct acgagaagcg cccgtgcctg
     7021 tgggtggagc cgaagggcga gtggggcgag ggctctgtgc agctggtgga gattcccacc
     7081 gtggacgaga ccttcgacaa catcgtggcg ttctggaacc cgaaggaaaa gccgcagccg
     7141 ggccaggaac tgctggtcgg ctaccgcctg tactggggcg ccgaaccgcc ggcacggccg
     7201 ccgctggcgc actgcgtcgc cagccgcacc ggcctgggcg gcgtggtcgg caagaagcgc
     7261 gagtacttca gctggcgctt cgcggtggac ttcgaaggtg gcgagctggc ctcgctgatc
     7321 gacaaggccg aggttgaagc ggtggtggaa gccagccgcg gccgggtcga gatcgtgtcg
     7381 gcacggccgt tgcgcgagat caacggctac cgcgcgatgt tcgacctggt gccgccggaa
     7441 ggcagcaccg agcagatcga catccgcctg ttcctgcgca gtggtggcaa gaccctcacc
     7501 gagacctggc tgtaccagta caccccgccg ccggcgggtg cgccggagcg cacgctgtac
     7561 tgaggggggg gcgcagggct tgcagccctg cacctgctga cgtcaacgtc aaaagcgggc
     7621 attccgtggg atggcggggt gggtccggtt gagggggacg gcgt
//
LOCUS       DAOKIP010000187         7589 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.187,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000187 DAOKIP010000000
VERSION     DAOKIP010000187.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 7589)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7589)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7589
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.187"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(135..425)
                     /locus_tag="QEL58_003265"
     CDS             complement(135..425)
                     /locus_tag="QEL58_003265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019182503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HDS1677701.1"
                     /translation="MNCGVDPPRARMTLNDAGNAGNTGSQLTPTADSDAEGVRVQLLR
                     NGAEVQFGQTWEFEPGVGGVHDHAFTARYIRTNDTLVPGLIRGEAVLDVDYW"
     gene            complement(1147..1656)
                     /locus_tag="QEL58_003266"
     CDS             complement(1147..1656)
                     /locus_tag="QEL58_003266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HDS1677702.1"
                     /translation="MKLLNRTALLTALLLAAPLASADTANLLISGRVLPGTCTLTAAP
                     IALDDVKASDLTPGTDNQIKLGALEFNGCVGVSKAVLSFSGTPADGDAERWKNTASGD
                     AAEGVSISLLAGASGTTNLKDGDTGIDVPVTGTTARYQLRAAYHLPSGAVPSAGDVST
                     EIVVTADYE"
     gene            complement(1696..4236)
                     /locus_tag="QEL58_003267"
     CDS             complement(1696..4236)
                     /locus_tag="QEL58_003267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial biogenesis outer membrane usher
                     protein"
                     /protein_id="HDS1677703.1"
                     /translation="MHLRPSHLRTPHRSASRSLGRAIAAVLAIAMGGHASANGDDSLQ
                     FSEGFLIGGRAIDMQRYVDGNPVQAGTYPLEVIINGQLHDKREIVFEETDGRQGAVPC
                     ITAGLLRELGLKETLLAGLDENDERCVDLASLIDGATVEFDESNLQLQLSVPQAAQAR
                     DARGYVAPAQRDHGITAAFVDYSVNHNRNQGQQATYLGLNTGVNLGAWRLRHRSSFSQ
                     GSHGSRHDVISSTLQRDLPAWNAQLLLGQGATGGELFESLSFTGVRLASDERMLPDSL
                     RGFAPVVQGVAETNAVVSIRQNGHVIHEVSVAPGPFSIEDLYPTNFGGDLNVTVTEAD
                     GRQQQFTVNFSAVPQALRPGASRFSATAGELRDARGVREALRFAEGTYARGISNHFTA
                     LGGLQVAEGYQSALFGGAINTPLGAFGADVSHSRARLANGEQLTGNSFRLNYQRYITA
                     TGTNFGLAALRYSTRGYLTLNDLALAYNDDWGVSGRARQRFQVNFSQRIGERSSISLN
                     GGQVRYWDSSRQQNDLQMRFQTTIGRANLSLSAMRLQVGDGRQDTRYAATFSLPLGSA
                     PSAPRFSTQVAHSARGDQGQLGLNGTLGADQSLSYSLSASDTSGGEGSASAYASYRSG
                     QGTVTAGYSRSGDFRAFNASAAGSVVVHRDGINFGGPVGDGFALVQADGAQGARIGYG
                     SGVRIGRNGYAMLPHVSPYRWNQIELDPSGLPMDVALLQTSQRTAPTAGSIVRVTFNA
                     SRERTLFIDATDALGQPLPFAARIEDSQGRSYGAVGQGGVIQLRGAPEGGQLIVDPEG
                     PHRCRLDYTTPAAPDAYGLSWSQAICTPLPAPTPALQAALDAVEPTSF"
     gene            4650..5162
                     /locus_tag="QEL58_003268"
     CDS             4650..5162
                     /locus_tag="QEL58_003268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010481962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 fimbrial protein"
                     /protein_id="HDS1677704.1"
                     /translation="MSNRLNLITVGALALALSPAAFAEKLEITGELMTSTCSVDATGG
                     TITVPMGKVDVAWVNEAERAGMKNFSIMLDCSGSGTDQEVGVRFGGTPDGSTGNLAIN
                     PGGATGVGVALYDSAGRQQKLGEDPLQWVDIPTGGKGQLDYSAWYSSPAKNATAGVAN
                     ASGDFVVLYK"
     gene            5219..5941
                     /locus_tag="QEL58_003269"
     CDS             5219..5941
                     /locus_tag="QEL58_003269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone"
                     /protein_id="HDS1677705.1"
                     /translation="MTPRASIWMTLLLSAAVAGPASAAVTLQGTRIVHSAGPGRDVTV
                     KATNGGAQAAMVQVWVDDGDSHSRPEDMRTPFRVTPADPRLLKPQQSQAYRITYAPRP
                     SDTPLPTDRESVFYFNLLDIPPRPADAKSTNLLQFAVRTRVKLFHRPEGLPGNARDAA
                     GQLRWRAEGSALQITNPTAYHVTLSTLTLADGSKVKTDMVAPGGTLRLPLPAGTSMPS
                     NVRFQWLDDYGSPRDAEASVER"
     gene            complement(6115..6681)
                     /locus_tag="QEL58_003270"
     CDS             complement(6115..6681)
                     /locus_tag="QEL58_003270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008268281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase"
                     /protein_id="HDS1677706.1"
                     /translation="MEMTTARTWRGRVFIGTSVDGKIARDDGTLDWLTDLPVRRHNVN
                     AVIAHPALIWDTFIGKIDAIVMGRATYETVIGFDQWPFEGMQVVVLTTRGQLDDPRVQ
                     VAGSVEEASRLLEALGVREVYIDGGRTIQAFLRADLVDEITISVAPIVLGAGRSLFAD
                     LETELQLVVQGSHATDDGLVRTTYEVVR"
     gene            7197..>7589
                     /locus_tag="QEL58_003271"
     CDS             7197..>7589
                     /locus_tag="QEL58_003271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677707.1"
                     /translation="MSANRYPFLFATLGDLANQLPAEIAEPLETTLAANPAANGITLL
                     DCLQRIRDVEAADGQPLQRKGRSSGQCMALARINRANAGLTVLLELLHASERVRVDGE
                     EAQQVGNDVREGLLLACRGLSEYVDTQVY"
BASE COUNT         1414 a         2458 c         2331 g         1386 t
ORIGIN      
        1 tgggctctga ccccgatcct gcattaccag gccatgcgta cacccaccac ccccgccatg
       61 ttcttcggca caactccagt gcgctatcgc atcgcatgca gaagcgcacg agccgtgcgc
      121 ccaactacgt ccactcacca gtaatcaacg tcaagcacgg cttcccctct gatcaggcca
      181 ggcaccagcg tgtcgttggt gcggatgtac cgcgcggtga aggcgtggtc gtgcacgcca
      241 ccaacgccag gctcgaattc ccacgtttgc ccgaactgca cttcggcgcc attgcggagc
      301 agctgcacgc gcacgccttc ggcgtcggaa tcagccgtgg gcgtaagctg gctaccggtg
      361 ttgcccgcgt ttccggcatc attcagtgtc atccgggcac ggggcggatc aacaccacaa
      421 ttcatgcgga tcgccacccg cttttccttg gcggtcgcgc caggcgtgga tagttctgcg
      481 aactgtacgt cggccagggt ttcatcactg tcctgcaacg gacacgtcgc cacgggaaag
      541 tgcagggtgt aggagctgtc atagctgcca tcaatggccg gggcctgcgg ggaggtccag
      601 gtcaaggacg cgttgaacgt atacgtacgc atccgccccc ctctggagaa aaattgaggc
      661 ctgaaatcga cgttcgcgtt ggacggtgac gccacttcaa tgggataggt ctgttcgcgc
      721 cccactgcaa ccggaacttg ttcccagcca aggacctgtt caaacatgaa aatcaccaac
      781 ggggattccg gaccgaactc atatgccggg aaggtcttac ccagatagtc gagcgtgccg
      841 acataggtca acccaggtgc atccaggcgt agattcagat caaaatcggc agtgcagcta
      901 ttgaatgtag tggggccgtt agccccttgg atccagcgcc cacggtcctg cgggtaggta
      961 tcatgcgtgt attggcgatc tctaggggta ttgttgtagc cggtgcaggc ttggaccatt
     1021 gcggacaccg acagcaacga caaaccgatc accagggccg ccatgcgtgc gcagccgggc
     1081 tttgtcattg atttccgctt gaatgcagtt ttcattgtca tgctccttcg gcgttggccg
     1141 ggcgccttac tcgtagtcgg ccgtaaccac gatctcggtc gacacatcgc ccgcactcgg
     1201 caccgcccca ctgggcaggt gataagccgc acgcagctga tagcgcgccg tcgtacccgt
     1261 taccggcaca tcaatgccgg tgtcgccatc cttcagattg gtcgtgccac tggcaccggc
     1321 cagcagtgaa atcgatacgc cttcggcggc atcaccggat gcggtgttct tccagcgctc
     1381 ggcatcgcca tcggcaggcg ttccagagaa cgaaagcaca gccttggaga cgccgacgca
     1441 gccgttgaat tccaacgcac cgagcttgat ctggttgtcc gtgcccgggg tgaggtcgct
     1501 ggccttcacg tcatccagcg cgatgggcgc tgcggtaagg gtgcacgtac cgggcaggac
     1561 ccggccgctg atgaggaggt tggccgtatc ggccgaagcc agcggcgcgg ccaacagcag
     1621 cgcggtgagc agagcagtgc gattgagcag tttcatggga atactccttg gagggcgtag
     1681 aggtgaagag gaaattcaga acgaggttgg ctcgacggcg tccagcgctg cctgcaatgc
     1741 aggggttggc gctgggagcg gcgtgcatat ggcctggctc caggacaggc cgtaggcatc
     1801 cggtgcagca ggggtggtgt agtccaggcg gcagcggtgc ggcccttccg gatcgacaat
     1861 cagctggccg ccctcaggcg caccgcgcaa ctggatgacg ccaccctgtc ccaccgcgcc
     1921 gtagctgcgc ccctggctgt cttcgatgcg tgcggcaaag ggcaacggct gccccagcgc
     1981 atccgtggcg tcaatgaaca gcgtgcgttc gcggctggcg ttgaaggtca cgcgcacgat
     2041 gctgcccgcc gtgggtgccg tgcgctgcga tgtctgaagt agcgccacat ccatgggcag
     2101 ccccgagggg tccagttcaa tctggttcca ccggtaaggg ctgacatgcg gcagcatcgc
     2161 gtagccgttg cgtccgatgc gcacaccact cccgtagccg atgcgggcac cctgtgcgcc
     2221 atcggcctgg accagcgcga agccatcgcc aaccgggcca ccgaagttga tgccatcgcg
     2281 gtgcaccacc acactgccgg cggcgctggc attgaacgcg cggaaatcgc ctgatcggct
     2341 gtagcctgcg gtaaccgttc cctgcccact gcgataggac gcgtaggcac tggcgctgcc
     2401 ctccccgccg ctggtatcgc tggccgatag gctgtaactc agcgactgat cagcacccag
     2461 cgttccgttc agacccagct ggccctgatc accgcgtgcc gaatgggcca cctgcgtgct
     2521 gaagcgcggt gcgctcgggg ccgagcccaa cggaagacta aaggtggccg catagcgcgt
     2581 gtcctggcgt ccgtcgccca cctgaaggcg catggcagac aggctcagat tggcgcggcc
     2641 gatagtggtc tgaaaccgca tctgcagatc gttctgctgc cgcgagctgt cccaatagcg
     2701 cacctgtccg ccattgagcg aaatcgagct gcgctctccg atgcgctgcg agaaattcac
     2761 ctggaagcgc tggcgagcgc ggccactgac accccaatcg tcgttgtacg ccagggccag
     2821 atcgttcagg gtgagatagc cgcgggtgct gtagcgcagc gcggccagtc caaagttggt
     2881 acccgttgcc gtgatgtagc gctggtagtt aagccggaag ctgttgcccg tcaactgctc
     2941 accattggcc aggcgcgcgc gcgaatggct gacgtcggca ccgaacgcac cgagcggggt
     3001 attgattgcc ccgccgaaca acgccgattg ataaccttcg gcaacctgca gcccacccag
     3061 tgcggtgaaa tggttgctga tgccgcgcgc ataggtgcct tcggcaaagc gtaatgcttc
     3121 gcgcacaccg cgtgcatcgc gaagttcacc ggcggtagca ctgaaacgac ttgcgcccgg
     3181 tcgcagcgcc tgcggcaccg cagagaagtt gacagtgaac tgctgctggc ggccatcggc
     3241 ttcggtaacg gtgacgttca agtcaccacc gaagttggtg gggtacagat cttcgatgga
     3301 gaacggaccc ggcgccacgc tcacttcgtg gatgacgtgg ccattctggc ggatgcttac
     3361 caccgcattg gtttctgcca cgccctgcac caccggcgcg aagccccgca gcgagtccgg
     3421 cagcatgcgt tcgtcgctgg ccagccgtac accggtaaat gacagcgact cgaatagctc
     3481 gccaccggtc gcaccctgcc cgagcagcag ctgggcattc cacgccggca gatcgcgctg
     3541 cagggtgctg ctgatcacat cgtggcgcga gccgtggctg ccctggctga aggaggaacg
     3601 atgacgcagc cgccacgccc cgaggttgac acccgtgtta aggcccaggt acgtggcctg
     3661 ttggccctgg ttacggttgt ggttgacgct gtagtcgacg aaggcggccg tgatgccgtg
     3721 atcgcgctgc gcgggtgcca catacccgcg tgcatcgcgc gcctgcgcgg cctgcgggac
     3781 gctcagctga agctgcaggt tgctttcgtc gaactcgacc gtggcgccat cgatgaggct
     3841 ggcaagatcg acgcaacgtt catcattctc gtccagtcca gccagcagcg tttccttgag
     3901 ccccagctcg cgcagcagac ccgcagtgat gcaaggcacc gcgccttgcc ggccatcggt
     3961 ctcttcaaag acgatttcgc gcttgtcgtg caactgccca ttgatgatca cctcaagggg
     4021 gtatgtgccg gcctgcacgg ggtttccgtc tacatagcgc tgcatgtcga tggctcggcc
     4081 accaatcagg aaaccttcac tgaactgcag ggagtcatcg ccgttggcgc tggcatgccc
     4141 ccccatggcg attgcaagga cggccgcaat tgcacgcccc agcgaacggc tggcagaacg
     4201 atgcggcgtg cggagatgag agggtcgcag gtgcatggtt agcgtcactt gacgaggccg
     4261 aaaccgacat cgcccgtagt tgtagagggc cccagcgtag acagcgctcg gccgacttcc
     4321 catgcaattt gttgcaaagc gacaacgcgc tacgaaaccg cacggcgtcc tgtccccgcc
     4381 ctgttttggc ttaattcagg cttgttttcg acgaatgcct gcgatcaatt gaatgcattg
     4441 caaatgcacc gagcgctgca tgcgacacgg cgtcgcagcc ggaagagaca tccctgaacc
     4501 gcacccatta ctgcaagcac ggaatcagct actccgcaag cagcttgcaa ctaattgcat
     4561 atccacaggc cgcccgactg agaacactgt gcgcgtccgc tggctcgccc atcgcggatt
     4621 ccccatcact agctaccgag gacattccca tgtcgaaccg attgaacctg attaccgtcg
     4681 gcgcgctcgc gctggccctg tctcctgccg cattcgccga gaagctggaa atcaccggcg
     4741 agctgatgac cagcacctgc tcggtcgatg ccaccggtgg caccatcacc gtgcccatgg
     4801 gcaaggtgga tgtggcatgg gtgaacgagg ccgagcgcgc cggcatgaag aacttcagca
     4861 tcatgctgga ctgcagtggc tcgggcaccg accaggaagt gggcgtgcgc ttcggcggca
     4921 ctcccgatgg cagcaccggc aacctggcta tcaatccggg tggtgccacc ggtgtaggcg
     4981 tggcgctgta tgacagcgcg ggccgccagc agaagctcgg cgaggaccct ttgcagtggg
     5041 tggatatccc caccggtggc aagggtcagc tggactacag cgcttggtac tcgtcgccgg
     5101 ccaagaacgc taccgcaggc gtggccaacg cctcgggcga cttcgtcgtt ctttacaagt
     5161 aaacccaccc acgcgcgccc gccagccctg gccggcgcgc atccaaggag gctaccccat
     5221 gaccccccgt gcatcgatct ggatgaccct gctgctgagt gccgctgtag ccggccccgc
     5281 atctgctgcc gtcacgctgc aaggcacgcg cattgtgcat agcgccggcc caggccgcga
     5341 tgtgacagtg aaagcgacca atggtggtgc acaggctgcc atggtgcagg tctgggtaga
     5401 cgacggtgac agccactcgc gaccggagga catgcgcacg ccgttccgcg tgacgcccgc
     5461 agacccacgc ctgctgaagc cgcagcagag tcaggcgtat cgcattacct acgcaccgcg
     5521 cccctcggac accccgctgc cgaccgaccg cgaatcggtc ttctacttca atctgctgga
     5581 tatccctccc cgccctgccg atgcgaagag tacgaacctg ctgcagtttg ccgtgcgcac
     5641 gagggtgaag ctgttccacc gaccggaggg gctgccaggc aatgcgcgcg atgccgccgg
     5701 ccagttgcgc tggcgcgctg aaggcagtgc gctgcagata accaacccca cggcctatca
     5761 cgtaaccctc agcacgctga cgctggccga cggcagcaaa gtcaagacag acatggtcgc
     5821 gcccggcggg acgctgcgac tgccgttgcc cgcaggcaca tcgatgccca gcaacgtccg
     5881 tttccaatgg ctggatgact acggctcgcc ccgcgatgct gaggcctccg tcgagcgctg
     5941 aatgtggacg agccggtgta cgcggcgtcg ctctgctttc tgtagaagct gtcctgtcag
     6001 gcgcaggccc agatggcctt cgcctgacaa gacagttgct acggggagtc tcaatgtcgg
     6061 catgggtgcg gctaccacat gcattcgccg acgatcacgc gtagcagctc tgcttcagcg
     6121 aacgacctcg tatgtcgtgc gaaccagtcc atcgtctgtg gcatgactcc cctgcaccac
     6181 cagctgcagc tcggtttcca agtcagcgaa caacgaacgc cccgccccaa gcacgatggg
     6241 ggcgaccgaa atcgtgatct cgtcaaccag atccgcgcgc agaaacgcct ggattgtgcg
     6301 gccgccatcg atgtacacct cccgcacacc caaggcttcg agaagccggc tcgcctcctc
     6361 gacagatcct gccacttgca cacgcgggtc atcgagctgg ccacgcgtcg tcagcacgac
     6421 cacctgcatg ccttcaaacg gccactggtc aaacccgatg accgtctcgt aggtggcccg
     6481 ccccatgacg atggcgtcga tcttcccgat gaacgtgtcc cagatcagtg ctggatgcgc
     6541 gatcaccgcg ttgacgttat ggcgacgtac tggcaggtcg gtcagccaat caagcgtacc
     6601 gtcgtcgcgg gcgatcttgc cgtcgacact tgtgccgatg aacacgcgtc cgcgccaggt
     6661 tcgggccgtc gtcatttcca tgtttccatc aatcggttgg gggtgagaga ttacaggctc
     6721 cagccgatac cgactgcaga cacactcggc tgcattgctt tctgtagagc caagcccacg
     6781 ctcggcagca cgcaataagc cgagcgtggg ctcggctcta caagacatgt cgcgatctgc
     6841 acgcattgac ggcctccgcc acgtcgctgc aaacattcgt actttctcta ctttccaact
     6901 tttctcattg gcagcacggg cgctgcatgc aaatcatgtg tggccaccga caacgggtgg
     6961 cacgggcttc caatcccgtg ggttggtttg ttgtttacgc ttgtctgccg gcgtcgctca
     7021 ttccctgtgg gtggcgccgg caggcattct gcccgcgcat ctatggcggg cggtgcgtgg
     7081 gggcctcgtg cccgccggca agtcaacacc aacccccggt attggaacca cgcatcgtcc
     7141 gccgcccttg ctgttaagca gggcggctcc ttcgtgcaac gcataaggaa gccgtcatga
     7201 gcgccaatcg ctacccgttc ctgttcgcca ccctgggcga tcttgccaac cagctgcccg
     7261 ccgagattgc agagccgctg gaaaccacgc ttgctgccaa ccctgccgcc aacggcatca
     7321 ccctgctgga ttgcctgcaa cgcattcgcg atgttgaggc ggccgatggc cagcccctgc
     7381 agcgaaaagg tcgttcctcc ggccagtgca tggcgctggc gcgaatcaac cgcgccaacg
     7441 ccggtctgac ggtgctgctg gaactgctgc acgccagcga gcgcgtgcgt gtggatggcg
     7501 aagaggcgca gcaggtgggc aacgatgtgc gcgagggcct gctgctggcc tgccgggggt
     7561 tgtcggagta cgtggatacg caggtctac
//
LOCUS       DAOKIP010000188         7579 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.188,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000188 DAOKIP010000000
VERSION     DAOKIP010000188.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 7579)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7579)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7579
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.188"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            192..407
                     /locus_tag="QEL58_003272"
     CDS             192..407
                     /locus_tag="QEL58_003272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005417149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677708.1"
                     /translation="MAIVLYVGGSKDGEKGVVPYGFSKSRADTALGPEFYTERFMELQ
                     GVGKVRLMALESMRDDIVMQRAARHYR"
     gene            615..3002
                     /locus_tag="QEL58_003273"
     CDS             615..3002
                     /locus_tag="QEL58_003273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014090230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding transcriptional accessory protein"
                     /protein_id="HDS1677709.1"
                     /translation="MHDAKNAQSALAQQIAQTIADEIGAQSAQVRAAVGLLDEGASVP
                     FIARYRKEVTGGLDDTQLRNLEVRLTYLRELEDRRAAVLASIGEQGKLSDELRNDILA
                     ADTKSRLEDLYLPYKPKRRTRAQIAREAGLEPLADGLLDDPTQDPQVFAASFVDTDKG
                     VADTKAALEGARAILMERWGEDAALVGELRTWLGETGVIRARVAEGKETEGAKYRDYF
                     EHAEALAKIPSHRLLALFRARREEILFLELDPGNDAEAGHQYAEGRVARKAGIADQGR
                     AADRWLLDACRLTWRAKLHTHLLLDLFNQAREKAEAEAIAVFGDNLKDLLLAAPAGPK
                     TVLGLDPGIRTGCKIAVVDATGKLVATDTIYPHEPRRQWDQSLQTIKQLCAKHNVELI
                     AIGNGTASRETDKLAGEAIKAAANPKLQKVVVSEAGASVYSASEFAAREFPGLDVSLR
                     GAVSIARRLQDPLAELVKIEPKAIGVGQYQHDVDQYRLARALDARVEDCVNAVGVYVN
                     TASAALLSRVSGLSATVAENIVRHRDDNGPFKRRKDLLKVARLGEKTFEQCAGFLRIA
                     DGDQPLDASAVHPEAYPVVERIVASTARPIKALIGDGSFLRGLKAEQFTDATFGVPTV
                     RDILKELEKPGRDPRPEFKAARFAEGVEDIKDLREGMVLEGVVSNVAAFGAFVDIGVH
                     QDGLIHISALSDTFVKDPRDVVKAGDIVKVKVLEVDVARKRIALTRRLDDTPGQASSR
                     PGQRDERGQGQGPRRDAGGQNRGPNRGQGNGGRPGASAAPANNALAEAFARAKRS"
     gene            3211..5394
                     /locus_tag="QEL58_003274"
     CDS             3211..5394
                     /locus_tag="QEL58_003274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HDS1677710.1"
                     /translation="MAGQGNNGNGLLERRLQELAEERRRLAMIIDGTAAGTWEWNVQT
                     GQMRVNARWAEIVGYRLEELQPICQETFLKLVHPDDIALSDAALEDHFAGRSDNYACL
                     LRMRHRNGQWIWIQDRGRVFEWDGQGRPLWMAGAHADVTELQQARQDAAETRQRLQAV
                     VDASDEVAVIATDTDGTITLFNTGAQRLLGYSAPEVVGQRRLDAFHDPAELNAWLQPL
                     ADAEGNLPGVFEALSARADGQTYSRQWTLLRKDGQPRQVRLSISRMDGANGVRIGYVG
                     MAIDITEILQARAEARLSAEKFAGAFTSAALGMALVSLEGRWLDVNDALCRILGYPRE
                     ELLQVDFQRLTHPDDLQADLALVHDLLAGRRSHYHLEKRYLDRDGRVIWTRLSVSLVR
                     NEHGQPVHFVSQIQDITAQRSSEQRLFESEQRSRLTLDAVADLVLSVNLDGRIDYANA
                     AAVRMLAGDGALSLAGHKVQDVLALTTEYAPGSVLDVSVLLDPESNAVDLHADLLLRL
                     GTATVPVDLTRAWLRDDEGHVRGAVWVLRDDTQQRARQREARHLAEIDPLTELSNRRG
                     FEVHLQQAITRVERTGQAASLMYIDLDRFKPVNDTWGHLAGDAVLWAVASVLRHGVRD
                     SDVVARLGGDEFAVILSGCTPRRAARIGGELLHTLASLSIPWDQDRLRVGASIGVAPL
                     AGGMSVDQAVAAADAQCYRAKAMGRNNVQVQGELSELPGDDGETG"
     gene            5490..6173
                     /locus_tag="QEL58_003275"
     CDS             5490..6173
                     /locus_tag="QEL58_003275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007934994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDS1677711.1"
                     /translation="MSRVLTIEDDAITAQEIVAELGSHGLHVDWVADGREGLVRAASG
                     DYDVITLDRMLPGLDGLAIVTTLRRIGVATPVLMLSALSDVDERVRGLRAGGDDYLTK
                     PFASDEMAARVEVLLRRRQQPASNETVLRVGDLQLDLLARTAHRGGRSLSLLPTEFKL
                     LEYLMRNAGQVLTRMMLFEEVWGYHFDPGTNLIDVHIGRLRRKLDQADAPSLIRTVRG
                     SGYVLSEAV"
     gene            6151..7530
                     /locus_tag="QEL58_003276"
     CDS             6151..7530
                     /locus_tag="QEL58_003276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing protein"
                     /protein_id="HDS1677712.1"
                     /translation="MSSAKLSDGWRSSSSRLLGLYSLLFVAWSCVLLGVLYWRVSLYL
                     DELAQSAVLQRAHLFEHFTGDGLTAALRENRRYDLHGIDAYGLFTPDGKPLAGMLKSL
                     PAQLPLDGSAHPVSGLPIADVNARGKRGFGLAMPTRDGRILVLVRYSGPLNEVNHLIL
                     DALLWGVSLTLVPGLLGWHLLRRRPLRRIQAIEQATARIVAGDLGQRLPLANRRDELD
                     MLATIVNAMLDRIEQLMTEVKGVCDNIAHDLRTPLTRVRAQLYRMRQQVQEEDPQAVA
                     LEQVLEETDTLMARFRALLRISELEDHQRRSGFATLAPDTLLQEIHAFYAPLAEEKGQ
                     VLLLELAADLPGVMGDRGLLFEAIGNLLDNAIRFAPEGGRVQLSARVEEGATCIAVED
                     SGPGIPETERSLVFQRFHRAEASKSGGFGLGLSIVAAIAGLHGFRLQVTSSSLGGACF
                     SLLCRPQVL"
BASE COUNT         1229 a         2449 c         2692 g         1209 t
ORIGIN      
        1 cggattcgtt agtcggaagt taaagatccg taagcattct gctgcgatcc cgcagtcatc
       61 tgcatgcaac cgatcgtcat tagccttcgt gacgttccag tcaggttcga cgcggtaagc
      121 tctccctcga tgagctcgca gcatcgctca tcgagtgcag tacgcagtag caatttggag
      181 gaatacatca catggcaatc gttctttatg tcggtggtag caaggatggc gagaagggcg
      241 tggtgcccta cggcttcagc aaatcccgcg ccgacaccgc gctggggccg gagttctaca
      301 cggagcggtt catggaactg cagggtgtcg gcaaggtccg cctgatggcc ctggaaagca
      361 tgcgtgacga catcgtcatg cagcgcgccg cccgccacta ccgctgacct tcgcaacacg
      421 cggcagggcg cgcccaccat cgtgcgcccg cgccggcatc ccagcccagg gccggtccga
      481 gccctctctc cgccaggatg ccggcgtcca ttccggacac gccgctgaac ctcgccgcct
      541 gtcaatgcct tgtccggctc cgtcgtgggt tgccagaatg gggtcttccc gtaacgcggc
      601 acagacctga agcaatgcac gacgccaaga acgcccagag cgcgctcgcc cagcagatcg
      661 cccagaccat cgccgacgag atcggtgccc agtccgccca ggtacgtgcc gccgtcggcc
      721 tgctcgacga gggcgccagc gttccgttca tcgcgcgcta ccgcaaggaa gtgaccgggg
      781 gcctggatga cacccagctg cgcaacctgg aagtgcgcct gacctacctg cgcgaactgg
      841 aagaccggcg cgcggcggtg ctggccagca tcggcgagca gggcaagctc agcgacgagc
      901 tgcgcaacga catcctggcg gccgatacca agagccgtct ggaagacctg tacctgccgt
      961 acaagcccaa gcgccgtacc cgcgcgcaga tcgcccgcga ggccgggctg gagccgctgg
     1021 ccgatggcct gctggacgat ccgacgcagg acccgcaggt gtttgctgcc agcttcgtcg
     1081 ataccgacaa gggcgtggcc gataccaagg ccgcgctgga gggcgcgcgc gcgatcctga
     1141 tggagcgctg gggcgaggac gccgcgctgg tgggtgagct gcgcacctgg ctgggcgaaa
     1201 caggggtgat ccgcgcccgc gtggccgagg gcaaggaaac cgaaggcgcc aagtaccgcg
     1261 actatttcga gcatgccgag gcactggcga agatcccgtc gcaccggttg ctggcgctgt
     1321 tccgtgcgcg gcgcgaggaa atcctgttcc tggagctgga cccgggcaac gatgccgagg
     1381 ccggccacca gtacgccgag gggcgcgtgg cgcgcaaggc cggcatcgcc gaccagggcc
     1441 gagccgctga ccgctggctg ctggatgcct gccgcctgac ctggcgcgcg aagctgcaca
     1501 cccacctgtt gctggacctg ttcaaccagg cccgcgagaa ggccgaagcc gaggccatcg
     1561 cagtcttcgg cgacaatctg aaggatctgc tgctggccgc accggccggc ccgaagaccg
     1621 tgctgggcct ggacccgggc atccgcaccg gctgcaagat cgccgtggtc gatgccaccg
     1681 gcaagctggt tgcgaccgac accatctatc cgcacgagcc gcgccggcag tgggaccagt
     1741 cgctgcagac gatcaagcag ctgtgcgcca agcacaacgt ggaactgatc gcgatcggta
     1801 acggcaccgc cagccgcgag accgacaagc tggccggtga agcgatcaaa gcggccgcca
     1861 acccgaagct gcagaaggtg gtggtcagcg aggccggcgc gtcggtgtac tcggcgtccg
     1921 agttcgccgc cagggaattc ccgggcctgg acgtgtcgct gcgcggcgca gtgtcgatcg
     1981 cgcgccgact gcaggatccg ctggccgaac tggtcaagat cgaacccaag gcgatcggcg
     2041 tcggccagta ccagcacgac gtggaccagt accgcctggc gcgggcgctg gatgcgcggg
     2101 tcgaggattg cgtgaacgcc gttggcgtct acgtgaacac ggcctcagcg gcgctgctgt
     2161 cacgcgtgtc cggcctgtcg gccacggtgg ccgagaacat cgtccgccat cgggacgaca
     2221 acggcccgtt caagcgccgc aaggacctgc tgaaggtcgc gcgcctgggc gaaaagacct
     2281 tcgagcagtg cgccggcttc ctgcgcatcg ctgatggcga ccagccgctg gatgcctcgg
     2341 ccgttcaccc ggaagcctac ccggtagtgg agcgcatcgt ggccagcacg gcgcgcccga
     2401 tcaaggcgct gatcggcgac ggcagcttcc tgcgcgggct gaaggccgag cagttcaccg
     2461 atgccacctt cggcgtgccg accgtgcgcg acatcctcaa ggaactggag aagccgggtc
     2521 gtgacccgcg ccccgagttc aaggcggcgc gtttcgccga gggcgtggag gacatcaagg
     2581 acctgcgcga gggcatggtg ctggaaggcg tggtcagcaa cgtggcggcc tttggggcct
     2641 ttgtcgatat cggcgtgcac caggacggcc tgatccacat ctcggcgctg tctgatacgt
     2701 tcgtgaaaga cccgcgtgac gtggtcaagg ccggtgacat cgtcaaggtg aaggtgctgg
     2761 aggtggacgt ggcgcgcaag cgcatcgccc tgacccggcg cctggacgac acccccggcc
     2821 aggcctccag ccgcccgggc cagcgcgacg agcgcggcca ggggcagggg ccgcgccgtg
     2881 acgcgggcgg ccagaaccgt gggccgaacc gcggccaggg caatggcggc cgccccggcg
     2941 cgtcggcagc accggccaac aatgccctgg ccgaagcctt cgcccgcgcc aagcgcagtt
     3001 gaggatcgtg gcccccgtca cggttgatcc ggggcggggg gcttgtcggt tttccccgtg
     3061 attgcgcaca ctggcgcttg aggggaggcg ttcggccccc ccgctgtcgc tggggagggc
     3121 catgacgcca gcacgacccg ccgtcttcgt tgcaggctgc agcgcgccgc tgcggcagat
     3181 gcgtgcctgc gcgggcgggg gaacgggttg atggcgggcc agggaaacaa cggcaacggg
     3241 ctgcttgaac gacgcctgca ggagttggcc gaagagcggc gccggctggc gatgatcatc
     3301 gacggcacgg cggccggtac ctgggagtgg aacgtgcaga ccggccagat gcgggtcaat
     3361 gcacgctggg ccgagatcgt cggctaccgc ctggaagagc tgcagccgat ctgccaggaa
     3421 accttcctga agctggtgca tccggatgac atcgcgttgt ctgatgccgc gctggaggat
     3481 catttcgcgg gccgcagcga caactacgcc tgcctgctgc gcatgcggca caggaacggc
     3541 cagtggatct ggatccagga ccgcggccgg gtcttcgaat gggacgggca gggccggccg
     3601 ctgtggatgg ccggcgcgca tgccgacgtg accgagctgc agcaggcgcg gcaggatgcg
     3661 gccgagaccc gccagcgcct gcaggcggtg gtcgatgcgt ccgatgaggt ggcggtgatc
     3721 gccaccgata ccgatggcac catcactctg ttcaataccg gtgcgcagcg cctgctgggt
     3781 tacagcgctc cggaggtggt cggccagcgc cggctcgacg ccttccatga tccggccgag
     3841 ctgaacgcct ggctgcagcc gctggccgat gccgagggca atcttccggg cgtgttcgag
     3901 gcgctgagtg cgcgtgccga cgggcagacc tactcgcggc agtggacctt gcttcgcaag
     3961 gatggccagc cacggcaggt gcgcctgtcg atcagccgca tggatggggc caacggggtg
     4021 cgcatcggct atgtcggcat ggccatcgac atcaccgaga tcctgcaggc ccgtgccgag
     4081 gcccgcctgt cggcggaaaa gttcgccggt gcgttcacgt ccgccgcgct gggcatggcc
     4141 ctggtttcgc tggaggggcg ctggctggac gtgaacgacg ccctgtgccg gatcctgggt
     4201 tacccgcgcg aagagctgct gcaggtcgat ttccagcgcc tgacccatcc cgacgatctg
     4261 caggccgatc tggcgctggt gcacgatctt ctggccgggc ggcgcagcca ctaccacctg
     4321 gaaaaacgct atctcgaccg cgatgggcgg gtgatctgga cacggttgtc ggtgtcgctg
     4381 gtgcgcaacg agcatggcca gccggtgcat ttcgtgtcgc agatccagga catcaccgcc
     4441 cagcgcagca gcgagcagcg cttgttcgag agcgagcagc gcagccggct cacccttgat
     4501 gcggtggctg acctggtgct cagcgtcaac ctggatggcc gaatcgacta tgccaatgcc
     4561 gcggccgtgc gcatgctggc cggcgatggc gcactgtcgc tggccgggca caaggtgcag
     4621 gacgtgctgg cgctgaccac cgagtacgca ccgggttcgg tgctggacgt ctcggtgctg
     4681 ctggacccgg aaagcaatgc cgtggacctg catgccgatc tgctgttgcg gctgggcacg
     4741 gcaacggtac cggtggacct gacccgcgcg tggctgcgcg atgacgaagg ccatgtgcgc
     4801 ggtgcggtct gggtgctgcg cgacgacacc cagcagcgtg cgcgccagcg cgaggcgcgg
     4861 cacctggccg agatcgaccc gctgaccgaa ctgagcaacc gccgtggttt cgaagtacac
     4921 ctgcagcagg cgatcacccg tgtcgagcgt accggccagg cggcctcgct gatgtacatc
     4981 gacctggacc gcttcaagcc ggtcaacgac acctggggcc atctggctgg tgatgccgtg
     5041 ctgtgggcgg tggccagtgt gctgcgccat ggcgtgcgtg actcggacgt ggtggcgcgg
     5101 ctgggcggtg acgaattcgc ggtgatcctg tccggctgca cgccgcgccg tgcagcgcgc
     5161 atcggtggcg agctgctgca tacgctggca tcgctgtcca ttccctggga ccaggaccgg
     5221 ctgcgggtcg gtgccagtat cggtgtcgcg ccgctggccg gcggcatgag cgtcgaccag
     5281 gctgtggccg cggccgacgc ccagtgctac cgggccaagg cgatgggccg caacaacgtg
     5341 caggtgcagg gcgaactgtc cgagctgccg ggtgacgacg gcgaaacggg ctgaaccggc
     5401 ccgcaccgtg gtggtggatg aaggatgttt catttgcccg tgccggctga tttggcgagc
     5461 atgggccagt ctcgactcca gcggtgccca tgtcgcgcgt attgaccatc gaggatgacg
     5521 ccatcactgc ccaggaaatc gtggccgagc tgggcagcca tggcctgcac gtggactggg
     5581 tggccgatgg tcgtgaaggc ctggtgcgcg cggccagcgg cgactatgac gtgatcacgc
     5641 tggaccgcat gctgcctggc ctggacggcc tggccatcgt caccacgctg cggcggatcg
     5701 gcgttgccac gccggtgctg atgctcagcg cgttgtccga cgtggacgag cgcgtgcgcg
     5761 gcctgcgcgc cggtggcgac gactacctga ccaagccgtt cgcctccgac gagatggcgg
     5821 cgcgggtgga agtgctgttg cgtcgccgcc agcagccggc cagcaacgag accgtgctgc
     5881 gggtcggcga cctgcagctg gacctgctgg cgcgcaccgc ccaccgtggc gggcgcagcc
     5941 tgagcctgct gccgaccgag ttcaagctgc tggagtacct gatgcgcaac gccgggcagg
     6001 tgctgacccg gatgatgctg ttcgaggaag tgtggggcta ccacttcgac ccgggcacca
     6061 acctcatcga cgtgcatatc ggccgcctgc ggcgcaagct ggaccaggcc gatgcaccgt
     6121 cgctgatccg taccgtgcgc ggcagtggct atgtcctcag cgaagctgtc tgacggctgg
     6181 cgttcgtcca gcagccgcct gctggggctg tacagcctgc tgttcgtggc ctggtcgtgc
     6241 gtgctgctgg gggtgctgta ctggcgggta tcgctgtacc tggacgagct cgcgcagtcc
     6301 gcggtgctgc aacgcgcaca tctgttcgag cacttcaccg gcgatgggct gaccgcggcg
     6361 ctgcgcgaga accgccgcta cgacctgcat ggtattgatg cctacggcct gttcaccccc
     6421 gacggaaaac cgcttgcggg catgctgaag tcgctgccgg cacagctgcc actcgatggc
     6481 agcgcacacc cggtttccgg attgcccatc gccgatgtga acgcgcgagg caagcgcggc
     6541 ttcggcctgg cgatgcccac ccgtgacggc cgcatcctgg tgctggtgcg ctacagcggg
     6601 ccgttgaacg aggtcaatca cctgatcctc gacgcgctgt tgtggggcgt ttcactgacc
     6661 ctggtgccgg ggctgctggg ctggcacctg ttgcgacggc ggccgctgcg acgcatccag
     6721 gccatcgaac aggccactgc gcgcatcgtt gccggtgatc tgggccagcg gctgccgttg
     6781 gccaaccgcc gcgatgaact ggacatgctg gcgaccatcg tcaacgccat gctcgaccgc
     6841 atcgagcagc tgatgaccga ggtcaaagga gtgtgtgaca acatcgccca cgacctgcgc
     6901 accccgttga cgcgcgtgcg cgcgcagctg taccgcatgc gccagcaggt gcaggaggaa
     6961 gacccacagg cagtggcgct ggagcaggtg ctggaagaaa ccgacacgtt gatggcacgc
     7021 ttccgcgcgc tgctgcggat ctccgagctg gaggatcacc agcgtcgttc cggcttcgcc
     7081 acgctggcgc cggacacgct gctgcaggag atccacgcct tctatgcacc gctggcggag
     7141 gagaaagggc aggtgttgct gctggagttg gccgccgatc tgccgggcgt gatgggggat
     7201 cgcggcctgt tgttcgaagc gatcggcaac ctgctcgaca atgcgatccg gttcgcaccg
     7261 gagggcggcc gtgtgcagct gtcggcgcgg gtggaagaag gcgcgacctg tatcgcggtg
     7321 gaggattccg ggccgggcat acccgagacg gagcgcagcc tggtattcca gcgtttccat
     7381 cgggcggagg ccagcaagag cggtggattc ggcctgggcc tgtcgatcgt ggcagccatt
     7441 gcggggctgc atgggtttcg cctgcaggtg acgtcgtctt cgctgggcgg cgcgtgcttc
     7501 agcctgctgt gccgaccgca ggtgctgtag ggggtgttct tctgcagggc ttgcagccct
     7561 gcacctgccg caatcaacg
//
LOCUS       DAOKIP010000189         7577 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.189,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000189 DAOKIP010000000
VERSION     DAOKIP010000189.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 7577)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7577)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7577
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.189"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            20..1327
                     /locus_tag="QEL58_003277"
     CDS             20..1327
                     /locus_tag="QEL58_003277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011098131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRZ/ATZ family hydrolase"
                     /protein_id="HDS1677713.1"
                     /translation="MLIEAGYVVPIEPHAVVLEDHAVAVRGSEIVAILPRAEARARFR
                     AAQVVSRPEAALMPGLVNAHTHNPMTLLRGVADDLPLMTWLQQHIWPVEAAVIGPEFV
                     ADGTTLAIAEMLRGGTTCANENYFFGDVQAAVYKKHGFRALVGAVIIDFPTAWAKTDD
                     EYFAKAGELHDQWRTDPLIGTAFAPHAPYTVNDANFERVRMLSDQLDMQVHLHTHETA
                     QEITDSIKLHGQRPLARLDRLGLVNDRLIAVHMTQLTDAEIHLCAERGVSVVHCPESN
                     LKLASGFCPACALQRAGVNLAIGTDGCASNNDLDMFSENRTAAILAKAVADDATALDA
                     ATTLRASTLGGARALGFGDRIGSIEVGKQADLVCVDLSALETQPLHNVLSQLVYATGR
                     QQVSDVWIAGKPKLVQRELVGMDLPGIIANARQWRERIRHIRA"
     gene            1353..2069
                     /gene="ubiG"
                     /locus_tag="QEL58_003278"
     CDS             1353..2069
                     /gene="ubiG"
                     /locus_tag="QEL58_003278"
                     /EC_number="2.1.1.222"
                     /EC_number="2.1.1.64"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 2-polyprenyl-6-hydroxyphenol
                     methylase/3-demethylubiquinol 3-O-methyltransferase UbiG"
                     /protein_id="HDS1677714.1"
                     /translation="MTAPHASSNFDQAELNKFAALANRWWDADGPQKPLHALNPVRLK
                     YVADRVPLRGARVLDIGCGGGLLSEALAQAGADVTAIDLAPELVKVARLHALESSATV
                     DYRVQAAEDLAAEQPGSFDVVTCMEMLEHVPDPGAIIEACKRLLKPGGHLFLSTINRT
                     AAAFAVAIVGAEYVARLLPKGTHHYQEFIKPAELARWLREADMQLVDVSGMAYEPWRN
                     HARLSSRTDINYLAYAVKPA"
     gene            2066..2761
                     /locus_tag="QEL58_003279"
     CDS             2066..2761
                     /locus_tag="QEL58_003279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005414020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycolate phosphatase"
                     /protein_id="HDS1677715.1"
                     /translation="MTTAGFPRAVLFDLDGTLLDSAPDFVATCDAMLAERGRAPIDPA
                     MLRPVVSKGSRAMVSAAFPELDAAARDALIPEFLQRYEALIGQHAVLFDGVAGMLAAL
                     DEAGTVWGIVTNKPEYLARLILPQYGWQQRCAVLVGGDTLAERKPHPLPLLHAAQAIG
                     IAAEDCVYVGDDERDILAARAAAMPSVAALWGYRLHSDDPLAWQADVLVENAELLQLA
                     SLWPTRPAAPAQP"
     gene            2773..3477
                     /locus_tag="QEL58_003280"
     CDS             2773..3477
                     /locus_tag="QEL58_003280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phytoene/squalene synthase family protein"
                     /protein_id="HDS1677716.1"
                     /translation="MSSTALDSFLDKWRSRWPEWSVAAPFVAESQREIAVAWFALLQE
                     FDDMLNTGGDPLPADAKLAWWGEELRSWAAHRSRHPLGRLLEPARAPWAQLAEALPDL
                     VDARTVALDAAGAERALANYSDAVAAVEAALFNDKPRTGAGRAVQLQTLAQRLQDAGV
                     AGVPRSLLDQDASTAAQRWAQYLLKGWGTRVPGPRPRRVWSSLARARVAAQAAGKPIE
                     ATPVRTLLRVWWAARG"
     gene            complement(3566..4414)
                     /locus_tag="QEL58_003281"
     CDS             complement(3566..4414)
                     /locus_tag="QEL58_003281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005414018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HDS1677717.1"
                     /translation="MRPALMIGALLLAAPLFSAPPAQAQDGIGSLIDSRVVFPASASQ
                     GALVIGKVPAGSRVQYAGRQLRVSGYGSVVFGIGRDEKGPLRVQVQRPDGGSETATIA
                     VTPRDWPTERVNGVPPKTVNPPPAIAERIKREQAQVTAARARDDDRTDFTQTFIWPVQ
                     GRISGRFGNARVYNGQPGAGHSGMDIAVPTGTPVKAPAAGIVTFAGPDLYLTGGTLLL
                     DHGFGVSSNFLHLSRIDVKVGDRVEQGQVIAAVGATGRATGPHLHWGMNWFDTRIDPL
                     LVLERK"
     gene            complement(4414..5760)
                     /locus_tag="QEL58_003282"
     CDS             complement(4414..5760)
                     /locus_tag="QEL58_003282"
                     /EC_number="3.5.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019302579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotase"
                     /protein_id="HDS1677718.1"
                     /translation="MSSTLITNARMVNEGRTFDGDLRIENGRIAQIGSGLTPRDGEQV
                     VDAAGRWLLPGMIDDQVHFREPGLTHKGDIASESAAAVAGGLTSFMDMPNTNPPTLDS
                     TILEAKYELARGRAWANYGFYHGASNDNLEAIRALDPKKAPGVKVFMGASTGNMLVDN
                     PETLDAIFRECPTPIITHCEDTPMIDANLKAFQEKYGDALTPDMHPDIRSREACIKST
                     RLAMSLARKHGTRLHVLHISTADELALFEKGPLIRADGSRKQITAETCVHFLHFARPD
                     YATKGNLIKCNPAIKEVSDREAITAALADDVLDVLATDHAPHTWEEKQKPYAQAPSGL
                     PLVQYALVAALERVHEGKLTREQVVQKFAHAPAQLFDVEERGFLREGYFADLVLVEDV
                     PFTVKREDVLSKCGWSPFEGTTFRSRIASTWVNGQQVWDGSKLVGEPAGQRMTYDR"
     gene            complement(5762..6016)
                     /gene="yidD"
                     /locus_tag="QEL58_003283"
     CDS             complement(5762..6016)
                     /gene="yidD"
                     /locus_tag="QEL58_003283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertion efficiency factor
                     YidD"
                     /protein_id="HDS1677719.1"
                     /translation="MISRLLIALLRFYKRFISPLLGPRCRFVPSCSEYAMEAISLHGP
                     LRGSWLAARRLGRCHPFHPGGFDPVPESPNAPSCRCTGKH"
     gene            6289..7518
                     /gene="dksA"
                     /locus_tag="QEL58_003284"
     CDS             6289..7518
                     /gene="dksA"
                     /locus_tag="QEL58_003284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019336819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase-binding protein DksA"
                     /protein_id="HDS1677720.1"
                     /translation="MAAKKTAKKAATAAKKTAKPVVKKLAAKPVAKKPASKPATKAAS
                     SQPAARKATAKKAPVKATKPVAKKAAAPAKAKPAAASKKAPVVKKAASKAAPVKKAAA
                     KPVAKKAAAKPAPKAVVKKAAAKPVAKPAAKKVAAAKPAATPAAVKKVTKNVAAPAVK
                     PSPAPVVKSAPKPAAKPAPAKPVPAKTVAVAAAQPAPKPAPAAAPVASKAPQSKNPVP
                     VSKSPAKTAVKSDSAPKTVSRPVGKVAVAVAARSAAPAPRSKYKVVEYKTDEATGRPI
                     LPAGYKPSSEEEYMSPLQQEYFRQRLQNWRADLVEESKQTIENLREEVRDIGDEAERA
                     TRETENSLELRTRDRYRKLIGKIDSTLKRLEAGDYGYCVDTGEEIGLERLEARLTAER
                     TIDAQERWEHLQKQQGD"
BASE COUNT         1239 a         2547 c         2617 g         1174 t
ORIGIN      
        1 cctccccgaa gcctgcgacc tgctcatcga agccggctat gtcgttccga tcgagccaca
       61 tgcggtggtg ctggaagacc atgccgtcgc cgtgcgtggc agcgagatcg tggccatcct
      121 gccgcgcgcc gaggcccgcg cgcgcttccg cgccgcccag gtggtcagcc gccccgaggc
      181 cgcgctgatg ccgggcctgg tcaacgcgca cacccacaac ccgatgaccc tgctgcgcgg
      241 cgtcgccgac gacctgccgc tgatgacctg gctgcagcag cacatctggc cggtggaagc
      301 ggcggtgatc ggccccgagt tcgtcgccga cggcaccacg ctggccatcg ccgagatgct
      361 gcgtggtggt accacctgcg ccaacgagaa ctacttcttc ggtgacgtgc aggccgcggt
      421 ctacaagaag cacggtttcc gcgcgctggt cggcgcggtg atcatcgatt tccccaccgc
      481 ctgggccaag accgacgacg agtacttcgc caaggccggt gaactgcatg accagtggcg
      541 caccgatccg ctgatcggca ccgcgttcgc gccgcatgcg ccgtacaccg tcaacgacgc
      601 caacttcgag cgggtgcgga tgctgtccga ccagctcgac atgcaggtgc acctgcacac
      661 ccacgagacc gcgcaggaga tcaccgattc gatcaagctg cacggccagc gcccgctggc
      721 gcggctggac cggcttggcc tggtcaacga ccgcctgatc gcggtgcaca tgacccagct
      781 gaccgatgcg gaaatccacc tgtgtgccga gcgcggcgtc agcgtggtgc actgcccgga
      841 atcgaacctg aagctggcct ccggcttctg cccggcctgc gccctgcagc gcgcaggcgt
      901 gaacctggcg atcggcaccg atggctgcgc cagcaacaac gacctggaca tgttcagcga
      961 gaaccgcacc gcggcgatcc tggccaaggc cgtggccgac gatgccaccg cgctggatgc
     1021 ggccaccacg ctgcgtgcgt ccacgctggg cggtgcgcgc gcgctgggct tcggtgaccg
     1081 catcggctcg atcgaagtcg gcaagcaggc cgacctggtc tgcgtcgacc tgtccgcact
     1141 ggaaacccag ccgctgcaca acgtgctgtc gcagctggtc tacgccaccg gccgccagca
     1201 ggtcagcgat gtctggattg ccggcaagcc gaagctggtg cagcgcgagc tggtcggcat
     1261 ggacctgccg ggcatcatcg ccaacgcgcg ccagtggcgc gagcgcatcc gtcatatccg
     1321 cgcctgaacc ttggcgccgc aaggactccc tcatgactgc cccccacgct tcttccaatt
     1381 tcgatcaggc cgagctgaac aagttcgccg cgctggccaa ccgctggtgg gacgctgacg
     1441 gcccgcagaa gccgctgcat gcgctgaacc cggtgcggct gaagtacgtg gccgaccgcg
     1501 tgccactgcg cggtgcgcgc gtgctcgaca tcggttgcgg tggtggcctg ctgagcgagg
     1561 cattggcgca ggccggtgcc gacgtcaccg ccatcgacct ggccccggaa cttgtcaagg
     1621 tcgcgcgcct gcatgcgctg gaaagcagcg ccacggtcga ttaccgcgtg caggccgccg
     1681 aggacctggc cgccgagcag ccgggcagct tcgacgtggt cacctgcatg gaaatgcttg
     1741 agcacgtgcc cgacccgggc gcgatcatcg aggcctgcaa gcgcctgctg aagccgggtg
     1801 gccatctgtt cctgtccacc atcaaccgca ccgcggcggc cttcgcagtg gccatcgtcg
     1861 gtgccgaata cgtggcgcgg ctgctgccca agggcaccca ccactaccag gaattcatca
     1921 agccggccga actggcgcgc tggctgcgcg aggccgacat gcagctggtg gatgtcagcg
     1981 gcatggccta cgagccgtgg cgcaaccatg cccgcctgag cagccgcacc gacatcaact
     2041 acctggctta cgcggtcaag ccggcatgac cacggccggc ttcccgcgcg cggtgctgtt
     2101 cgacctggat ggcaccctgc tggacagtgc gccggacttc gtcgccacct gcgatgcgat
     2161 gctggccgag cggggccgtg cgccgatcga tccggcgatg ttacgcccgg tggtgtcgaa
     2221 gggctcgcgg gcgatggtgt cggcggcctt cccggaactg gatgccgccg cgcgcgatgc
     2281 gctgatcccg gagttcctgc agcgctacga agcgctgatc ggccagcatg cggtgctgtt
     2341 cgatggcgtg gccggcatgc tggcggcact ggatgaggcc ggtacggtgt ggggcatcgt
     2401 caccaacaag ccggagtacc tggcgcgcct gatcctgccg cagtacggct ggcagcagcg
     2461 ctgcgcggtg ctggtcggcg gtgacacgct ggccgaacgc aagccgcatc cgctgcccct
     2521 gctgcacgcc gcacaggcca tcggcattgc cgccgaagac tgcgtgtacg tgggcgacga
     2581 cgagcgcgac atcctcgccg cgcgtgccgc cgccatgccc tcggtggcgg cgctgtgggg
     2641 ctaccgcctg cacagtgacg acccgctggc ctggcaggct gacgtgctgg tcgagaacgc
     2701 cgagcttctg caactggcca gcctctggcc gacccggccg gcagccccgg cccagccgta
     2761 aggaatgacg tagtgagcag taccgcgctg gacagtttcc tcgacaagtg gcgcagccgc
     2821 tggccggaat ggtcggtggc cgcgccgttc gtggccgaat cgcaacgcga gatcgcggtc
     2881 gcgtggttcg cgctgctgca ggaattcgac gacatgctca acactggcgg cgatcctttg
     2941 ccggcagatg ccaagctggc ctggtggggc gaggagctgc gcagctgggc tgcgcatcgt
     3001 tcgcgccacc cgctgggtcg cctgctggag ccggcgcgtg caccgtgggc gcagctggcc
     3061 gaggcgctgc cggatctggt tgacgcgcgc acggtcgcgc tggatgcggc cggcgccgaa
     3121 cgcgcactgg ccaactattc cgacgcggtg gcggcggtgg aagcggcgtt gttcaacgac
     3181 aagccgcgta ccggtgccgg gcgtgcggtg cagctgcaga ccctggccca gcgtctgcag
     3241 gatgccggcg tggcgggcgt accgcgcagc ctgctggatc aggacgccag cacggccgcg
     3301 cagcgttggg cgcagtatct gctgaagggc tggggcaccc gtgtgccggg cccgcgcccg
     3361 cgccgcgtct ggtcaagcct ggcgcgcgcg cgcgtggccg cacaggctgc gggcaagccg
     3421 atcgaggcca ccccggtgcg cacgctgctg cgtgtgtggt gggccgcacg cggttgatcg
     3481 attcgggtgg gtgcggaccc tggtccgcac gctcttcgag attgtgccga ccaaggttgg
     3541 cacccaccaa ggcgcattgc gcgcgctatt tgcgttccag caccagcagc gggtcgatgc
     3601 gggtatcgaa ccagttcatg ccccagtgca gatgtgggcc ggtggcacgg ccggtggcgc
     3661 cgacggcggc gatcacctgg ccctgttcga cacggtcacc gaccttcacg tcgatgcgcg
     3721 acaggtgcag gaagttggag ctgaccccga agccgtggtc gagcagcagc gtgccaccgg
     3781 tcaggtacag gtccggaccg gcgaaggtga cgatgccggc ggccggcgcc ttcaccggcg
     3841 tgccggtcgg caccgcgatg tccatgccgg aatgacctgc accgggctgc ccgttgtaca
     3901 cgcgcgcatt gccgaagcgg ccgctgatgc ggccctgcac cggccagatg aaggtctggg
     3961 tgaagtcggt gcggtcgtca tcgcgggcac gcgcggcagt cacctgcgcc tgttcgcgct
     4021 tgatccgctc ggcaatcgcc ggtggcgggt tgaccgtctt cggcggcacg ccgttgaccc
     4081 gttcagtggg ccagtcgcgt ggcgtcaccg cgatggtcgc ggtctcgctg ccaccatcgg
     4141 ggcgctgcac ctgcacgcgc agcgggccct tctcgtcgcg gccgataccg aacaccacgc
     4201 tgccatagcc gctcacccgc aactgccggc cggcgtactg cacgcggctg ccggcgggca
     4261 ccttgccgat caccagcgcg ccctgcgacg cgctggccgg aaacaccacg cggctgtcga
     4321 tcaggctgcc gatgccatcc tgtgcctgcg ccgggggtgc agaaaacagg ggcgcggcca
     4381 gcagcagcgc cccgatcatc agtgccgggc gcatcagcgg tcgtaggtca tgcgctggcc
     4441 ggcgggctcg cccaccagct tgctgccgtc ccacacctgc tggccgttga cccaggtgga
     4501 ggcaatgcgc gaacggaagg tggtgccttc gaacggcgac cagccgcact tggacagcac
     4561 gtcctcgcgc ttgacggtga acggcacgtc ctcgaccagc accaggtcgg cgaagtagcc
     4621 ctcgcgcagg aagccgcgct cctcgacatc gaacagctgt gccggggcgt gggcgaactt
     4681 ctgcaccacc tgctcgcggg tcagcttgcc ttcgtgcacg cgctccagcg cggctaccag
     4741 cgcgtactgc accagcggca ggcccgacgg cgcctgcgca tagggcttct gcttctcttc
     4801 ccaggtatgc ggggcgtggt cggtggccag cacgtccagc acgtcatcgg ccagcgcggc
     4861 ggtgatcgcc tcgcggtcgg acacttcctt gattgccgga ttgcacttga tcaggttgcc
     4921 tttggtcgca tagtccgggc gtgcgaagtg caggaagtgc acgcaggttt cggcggtgat
     4981 ctgcttgcgg ctgccgtcgg cgcggatcag cgggcccttc tcgaacagcg ccagctcgtc
     5041 ggcggtggag atgtgcagca cgtgcaggcg ggtgccgtgc ttgcgtgcca gcgacatcgc
     5101 cagccgggtc gacttgatgc aggcttcgcg cgaacggatg tccgggtgca tgtccggggt
     5161 cagtgcgtcg ccgtactttt cctggaaggc cttcagattg gcatcgatca tcggcgtgtc
     5221 ttcgcagtgc gtgatgatcg gggtcgggca ttcgcggaag atcgcgtcca gcgtttccgg
     5281 gttgtccacc agcatgttgc cggtcgaagc gcccatgaac accttcacgc cgggcgcctt
     5341 cttcgggtcc agcgcacgga ttgcttccag gttgtcattg ctggcgccgt ggtagaagcc
     5401 gtagttggcc cacgcgcggc cgcgcgccag ttcgtacttg gcttccagga tggtcgaatc
     5461 cagcgtcggc ggattggtgt tgggcatgtc catgaagctg gtcaggccac cggccacggc
     5521 ggcagccgat tcgctggcga tgtcgccctt gtgggtcagg cccggttcgc ggaagtgcac
     5581 ctggtcgtcg atcatgccgg gcagcagcca gcgcccggcc gcatccacca cctgctcgcc
     5641 gtcgcgcggc gtcaacccgc tgccgatctg cgcgatgcgg ccgttctcga tgcgcaggtc
     5701 accatcgaag gtgcggcctt cgttgaccat gcgggcgttg gtgatgaggg tggaggacat
     5761 gtcagtgttt tcctgtgcaa cggcaagagg gggcgttggg ggactcgggc acggggtcga
     5821 agccgccggg atggaacgga tggcagcgtc ccaggcggcg cgcagccagc cagctgccgc
     5881 gcagcgggcc atgcagggag atggcctcca tcgcgtattc agaacaactg ggcacgaaac
     5941 ggcagcgcgg ccccagcagg gggctgatga agcgcttgta gaagcgcagc agggcaatga
     6001 gcaggcgcga gatcacccag tcatcttatg ccagttggca tgaaggccgc atttgtgcag
     6061 gatgggccgt tggtcgcatg tcgccgatgg cctgcgaccg gtaccagcac cttcgggtgc
     6121 tggccaggtt ccgtaccgcg caaggcggtc cgtgttcgtc ggaccgcccc ttggctggct
     6181 tggctccagg actgaatgga gcagggccgc tgaggttgct gctgcgggtc gggtaggcta
     6241 taaaggcccg ctttcccggg ccccggggaa tccaaggaag agcgtttcgt ggctgctaaa
     6301 aaaactgcaa agaaggccgc aacggccgcc aagaaaaccg ccaagcctgt tgtgaagaag
     6361 ttggcggcaa agcccgttgc caagaagccg gccagcaagc cggcgaccaa ggcagcgtcc
     6421 tcgcaaccgg cggccaggaa ggccaccgca aagaaagcgc cggtcaaggc aaccaagccg
     6481 gtggcgaaga aggccgccgc gcccgccaag gccaagcctg ccgccgccag caagaaggcg
     6541 ccggtggtga agaaggctgc cagcaaggcc gcgccggtca agaaggccgc cgccaagccg
     6601 gtagcgaaga aggcagcagc caagccggcg ccgaaggcgg tggtgaagaa ggctgcggcc
     6661 aagccggtcg ccaagcctgc agcgaagaag gtggctgcgg ctaaaccggc ggccacacct
     6721 gccgctgtaa agaaggtcac caagaatgtt gctgcgccgg ccgtaaagcc gagcccggcc
     6781 ccagtagtga agtccgcacc gaagccggct gccaagccgg ctccggccaa gcctgtcccg
     6841 gccaagaccg tggcagtggc agcagcccaa ccggccccca agccggcccc ggccgccgca
     6901 cctgttgctt cgaaggcccc gcaatccaag aatcccgtgc ccgtttcgaa atcgcctgcc
     6961 aaaaccgccg tgaaatccga ttccgccccg aagaccgtgt cgcgccctgt cggcaaggtt
     7021 gccgtggccg tcgccgcccg ttcggctgca ccggccccgc gcagcaagta caaggtggtc
     7081 gagtacaaga ccgacgaggc caccggccgc ccgatcctgc cggctggcta caagccgtcc
     7141 tcggaagagg agtacatgag cccgctgcag caggaatatt tccgccagcg cctgcagaac
     7201 tggcgtgcgg acctggtgga agagtccaag cagaccatcg agaacctgcg cgaggaagtg
     7261 cgtgacatcg gcgatgaagc cgagcgcgcg acccgcgaaa ccgagaactc gctggaactg
     7321 cgtacccgcg accgctaccg caagctgatc ggcaagatcg acagcaccct caagcgcctg
     7381 gaagccggcg actatggcta ctgcgtggat accggtgaag agatcggctt ggagcgcctg
     7441 gaagcgcgac tgaccgccga gcgcaccatc gacgcccagg agcgttggga gcacctgcag
     7501 aagcagcagg gcgactgatt cccggtcgtt gtccggtcat gcgaaaaacc cggcctcggc
     7561 cgggtttttt gttgggc
//
LOCUS       DAOKIP010000190         7506 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.190,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000190 DAOKIP010000000
VERSION     DAOKIP010000190.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 7506)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7506)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7506
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.190"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(37..1053)
                     /gene="pstS"
                     /locus_tag="QEL58_003285"
     CDS             complement(37..1053)
                     /gene="pstS"
                     /locus_tag="QEL58_003285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005408792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter substrate-binding
                     protein PstS"
                     /protein_id="HDS1677721.1"
                     /translation="MIHAFKSRVAVAVFAASSVFAANAAEITGAGASFIYPVMSKWSA
                     DYNAATSNKVNYQSIGSGGGIAQIKAKTVDFGSSDAPLKPEELAASGLAQFPSVIGGV
                     VPVVNVAGIAPGALKLDGTVLANIFLGKIKTWNDPAIAALNPGLTLPSAKITVVHRSD
                     GSGTTFNFVNYLSKVSPEWKSSVGEGTSVQWPAGIGGKGNEGVAAYVKQIKGGIGYVE
                     LSYALQNKLSYTAMKNAAGKFVQPSDASFAAAAASADWASAKDFYLVMTNAPGAESWP
                     ITATNFILVHKKPKNAANGKATQEFFRWVYKSGDAQARQLDYVPLPDSLVRQIETYWS
                     QNLK"
     gene            1551..2783
                     /locus_tag="QEL58_003286"
     CDS             1551..2783
                     /locus_tag="QEL58_003286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014646541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate porin"
                     /protein_id="HDS1677722.1"
                     /translation="MRSHLLAAAVVASLGLVSADAFAAPASTGVSQAQLQQLQAQIAA
                     LQAQVQQLQSDSQALQAQSDAQSEVNITQAQALEGAQKTQTSVDKLAKLVNDNKIGGR
                     MFFDLTNIDKTSNGKDTAASGTGLDVKRFYLTVDHKFNDIWSANLTTDFQYSSAIGNT
                     ELFVKKAYVQGSFDPAFNLRVGAADMPWIPYVEKFYGMRYVENTLTDRLKYGNSSDWG
                     LHGFGNLGNNFNYAVSVVSGAGYKNPTRSKGMDVEGRVAYTPNENFVVAVGGYSGKLG
                     KETDIQSAENTYTRANAMVAYADSNFRVGGEYFQAKNLNNVLTVATDKTSGWSVWGSV
                     RVTDGGINVFGRYDDTDVSKTLDPTLSDKYWNVGVEFPVMKNLKLSTVYKYTHLANAG
                     DKKNDKTKEFGVWGDLSF"
     gene            complement(2863..3555)
                     /gene="nth"
                     /locus_tag="QEL58_003287"
     CDS             complement(2863..3555)
                     /gene="nth"
                     /locus_tag="QEL58_003287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004151462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III"
                     /protein_id="HDS1677723.1"
                     /translation="MATVKKTARAAARRGGVMPRADVVEMFTRLRELNPHPKTELEYS
                     SPFELLVAVALSAQATDVGVNKATRRLFPVANTPAKILALGEEGLKQYIATIGLFNAK
                     AKNVIATCAILLEKHGGEVPRDRDALEALPGVGRKTANVVLNTAFGEPVMAVDTHIFR
                     VANRTGLAPGKNVREVEDKLVKAIPAEFLLDAHHWLILHGRYVCKARKPDCPGCVIAD
                     LCRFKDKTTAEA"
     gene            complement(3555..3908)
                     /locus_tag="QEL58_003288"
     CDS             complement(3555..3908)
                     /locus_tag="QEL58_003288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014036553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677724.1"
                     /translation="MASRPNPAQLFARVQADDLDGALQAGLMDYVARADDEQLLPGHP
                     ELPQRLQQAQQQLHAAWAARERYRARAVRLARREAERDARRTPAPAPDVKPALPAAAA
                     AILARAKARATGKEQ"
     gene            complement(3913..4695)
                     /locus_tag="QEL58_003289"
     CDS             complement(3913..4695)
                     /locus_tag="QEL58_003289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007966234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HDS1677725.1"
                     /translation="MADALIAVADDGAIRTVTVQRPDKLNALNAATLQALAEAFSAAA
                     ADPEVRVVVLTGAGPKAFVAGADIAEMNTLSAVQGRDFSLLGQGLMRQIERMPKPVIA
                     RVNGFALGGGLELAMACHLRIAADTAKVGQPEINLGLIPGFGGSQRLLRLCGRAATLE
                     LCLLGAPVNAARALELGIVNEVVPADALDSRVQDVARQLARSAPLALRGLLDAVHVGG
                     ECSLEAGLEYESAQFGLLFATEDMREGTSAFLQRRPPAFQNR"
     gene            4863..5564
                     /locus_tag="QEL58_003290"
     CDS             4863..5564
                     /locus_tag="QEL58_003290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002804447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HDS1677726.1"
                     /translation="MKLRSIAVAVAALALTGNAFAQDVSSEKGKLSYYFGYDYGNNLA
                     ELTGRGEQLDINSVVKGLQDAYAKKQPAITAEQLKPAVEAFQKREQGRAQAAKAEYEK
                     AAAENKTKSDQFIAANKAKAGVQSLPSGVQYRVIEAGKGAKPTQASTVQLEVAGPFPY
                     GQRPTEARPAQQIPSIKVSEVEMKAMRETLLQMPAGSKWEVTLPPDQAYGADPRTPFP
                     PNVAVQFEIKLVSVK"
     gene            5667..6479
                     /locus_tag="QEL58_003291"
     CDS             5667..6479
                     /locus_tag="QEL58_003291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA pyrophosphatase"
                     /protein_id="HDS1677727.1"
                     /translation="MQTTEESARVVASPCIGVCKLDPDRQCTGCGRHLDEIARWSSMS
                     NEERSRILHRVQPLREQLQQSLRGSLADHERLMRALHPLAEPPAGDGWNRSELSDLLP
                     PGPPVEAAVLAGIVPRANGAQVILTRRTETLRTHGGQVGFPGGRTEPDDRDALAAALR
                     ESQEEIALAPGQVHALGYLDPFVTITGYRVTPVVAVVDPDFVPVPQPSEVAEVFEVPL
                     DYLMAADNLRQVEINHRGRIRHVLEYGWPGQRIWGATAAILYNLRRRLEQVQ"
     gene            6476..7378
                     /locus_tag="QEL58_003292"
     CDS             6476..7378
                     /locus_tag="QEL58_003292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008267183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase"
                     /protein_id="HDS1677728.1"
                     /translation="MKPIDPPWTTLVDVATLAAALGEGVRVVDARATASTAVRVVDAR
                     SSLADPQAGGGQYLAGHIPGAVYADLNRDLSDLSRVGHGRHPLPDSDAFAAKLGQWGI
                     GPDTQVVVYDGSDGSMAAARLWWLLRLLGHGRVAVLDGGIAAWQAAGHPLATGEEAVT
                     ALPAYPGRFDTTQIANADEISARLKHAPGWLVDARAGERFRGEVEPLDPVAGHVPGAV
                     NRPFALNVLDGRLRDAQELRAELQGVIGNRDPQQVVLMCGSGVTACHLLLAMESAGLS
                     GARIYADSWSGWVSDSSRPVASGA"
BASE COUNT         1299 a         2469 c         2497 g         1241 t
ORIGIN      
        1 cccgccgatc ccgttcctgc gggggaacgc gcttgcttac ttcaggttct gcgaccagta
       61 ggtctcgatc tggcggacca ggctgtccgg cagcggcacg tagtccagct ggcgggcctg
      121 ggcgtcgccg ctcttgtaga cccagcggaa gaactcctgg gtggccttgc cgttggcagc
      181 gttcttcggc ttcttgtgca ccaggatgaa gttggtggcg gtgatcggcc aggactcggc
      241 gcccggggcg ttggtcatca ccaggtagaa gtccttggcg ctggcccagt cggcgctggc
      301 ggcagcggcg gcgaacgagg cgtcgctcgg ctgcacgaac ttgccggcgg cattcttcat
      361 cgcggtgtac gacagcttgt tctgcagtgc gtaggacagt tcgacgtagc cgatgccgcc
      421 cttgatctgc ttcacgtagg cagcaacgcc ttcgttgccc ttgccgccga tgccggccgg
      481 ccactggacc gaggtgcctt caccgaccga gctcttccac tccgggctga ccttggacag
      541 gtagttgacg aagttgaagg tggtgcccga accgtccgag cggtgcacga cggtgatctt
      601 ggcgctcggc agggtcaggc ccgggttcag cgcggcgatg gccgggtcgt tccaggtctt
      661 gatcttgccc aggaagatgt tggccagcac ggtgccgtcc agcttcagcg cgcccggagc
      721 gatgccggcc acgttgacca ccggcaccac gccgccgatc accgacggga actgggccag
      781 gcccgaagca gccagttctt ccggcttcag cggggcgtcg gacgagccga aatcaacggt
      841 cttggccttg atctgggcga taccaccgcc ggagccgatc gactggtagt tgaccttgtt
      901 gctggtggcg gcgttgtagt cggccgacca cttcgacatc accgggtaga tgaacgaggc
      961 gcccgcgccg gtgatttcag cggcgttggc ggcgaacacg gacgacgctg cgaagacggc
     1021 aacggcaacg cgcgacttga aggcgtggat cacggggtgg ctcctgggtt gattgggatg
     1081 cggggttacc cgcccggtgc acattccata acggttcgat gacagcgcag ggaccgttgt
     1141 atgacgcatc catgacagcg ctgcccggcg cctgtgcggc aggggcgtga aggaacgacg
     1201 cccccgtcgt gacccccttc tatatgtcgc tgacggcctg tccgatgcat gcgtgctccg
     1261 ggcattccgc agcgatccgg cgtttttcgc gcgcaaccgg gcggcaggtg gatgccgcgc
     1321 ggcgggcggc ctgcgcgtcg acgcagatac atcacgccat atgccgcaag ggatcgacaa
     1381 ggatggcgcg acaaatgcgt cgtacgcatg accgcacgaa gaaatctgtg gttggtgctc
     1441 aggttgtcat tcggctgtca tggttttaac ggaatgttcg caaaacgctt gaccggcctg
     1501 ccggcgtggc gttctgccca agccattcca accctctgga gaaatccaaa atgcgttccc
     1561 atttgctcgc cgccgcggtc gttgcaagcc tcggtctggt ttccgccgac gccttcgcag
     1621 ctcccgccag cacgggcgta tcccaggcac agctgcagca gctgcaggcg cagatcgctg
     1681 ctctgcaggc ccaggtccag cagctccaga gcgactcgca ggcgctgcag gcgcagtccg
     1741 acgcgcagtc cgaagtgaac atcacccagg cccaggccct ggaaggtgca cagaagaccc
     1801 agaccagcgt cgacaagctg gccaagctgg tcaatgacaa caagatcggc ggtcgcatgt
     1861 tcttcgacct gaccaacatc gacaagacca gcaacggcaa ggacaccgcc gccagcggca
     1921 ccggtctgga cgtcaagcgc ttctacctga ccgtcgacca caagttcaac gacatctggt
     1981 cggcgaacct gaccaccgac ttccagtaca gctcggccat cggcaatacc gaactgttcg
     2041 tcaagaaggc ttacgtgcag ggcagcttcg acccggcctt caacctgcgc gtcggtgccg
     2101 ccgacatgcc gtggatcccg tacgtcgaga agttctacgg catgcgttat gtcgagaaca
     2161 ccctgaccga tcgcctgaag tacggcaact cgtccgactg gggcctgcat ggcttcggca
     2221 acctgggcaa caacttcaac tacgccgtct cggtcgtgtc cggcgccggt tacaagaacc
     2281 cgacccgcag caagggcatg gacgtggaag gccgcgtggc ctacaccccg aacgagaact
     2341 tcgtggtcgc cgtcggtggc tacagcggca agctgggcaa ggaaaccgac atccagagcg
     2401 ccgagaacac ctacacccgc gccaacgcga tggtggccta cgccgacagc aacttccgcg
     2461 tcggtggcga gtacttccag gccaagaacc tcaacaacgt gctgaccgtt gccaccgaca
     2521 agaccagcgg ctggtcggtg tggggcagcg tgcgcgtcac cgacggcggc atcaacgtgt
     2581 tcggtcgtta cgatgacacc gacgtcagca agaccctgga cccgaccctg agcgacaagt
     2641 actggaacgt cggcgtcgag ttcccggtca tgaagaacct caagctgtcg accgtgtaca
     2701 agtacacgca cctggccaac gccggcgaca agaagaacga caagaccaag gaattcggcg
     2761 tctggggcga cctgtcgttc tgatcacctg aaacacagtg tctgaaagcg agacggcggg
     2821 cctggtgccc gccgtcttcg tttcgtcaca acacggtccg cgtcacgctt cggccgtggt
     2881 cttgtccttg aaccggcaaa ggtcggcaat cacgcagccc gggcaatccg gcttccgtgc
     2941 cttgcacacg tagcggccgt gcaggatcag ccagtgatgc gcgtcgagca ggaactcggc
     3001 cggaatcgcc ttcaccagtt tgtcttccac ctcgcgcacg ttcttgccgg gggccagccc
     3061 ggtgcggttg gccacgcgga agatatgcgt atccaccgcc atcaccggct cgccgaacgc
     3121 cgtgttgagc accacgttgg cggtcttgcg gccgacgccg ggcagcgcct ccagcgcatc
     3181 gcggtcacgc ggtacttcgc cgccatgctt ctccagcagg atcgcgcagg tggcgatcac
     3241 gttcttcgcc ttggcgttga acaggccgat ggtggcgatg tactgcttca gaccttcctc
     3301 gcccagcgcg aggatcttcg ccggcgtgtt ggccaccggg aacaggcggc gcgtggcctt
     3361 gttgacgccg acgtcggtgg cctgtgccga cagcgccacc gccaccagca gttcgaacgg
     3421 cgagctgtat tccagttcgg tcttcgggtg cggattgagt tcgcgcaggc gggtgaacat
     3481 ttccaccacg tcggcacgcg gcatcacgcc gccacggcgc gccgctgcgc gcgcggtctt
     3541 cttcaccgtg gccattactg ctccttgcca gtggcgcggg ccttggcccg ggcgagaatg
     3601 gcggcggcgg cagcgggcag ggccggcttc acgtccggcg ccggggcggg tgtccggcgt
     3661 gcgtcgcgtt cggcctctcg gcgcgccagc cgcaccgcac gggcgcggta gcgttcgcgc
     3721 gcggcccacg cggcgtgcag ctgctgctgg gcctgctgca ggcgctgcgg caactcgggg
     3781 tggccgggca gcaactgttc gtcgtcggca cgggcgacat agtccatcag cccggcctgc
     3841 agggcgccat cgagatcgtc tgcctggacc cgggcgaaca gctgcgcggg gttgggtcgg
     3901 gatgccatgg cgtcagcggt tctggaaggc gggcggacgg cgctgcagga aggcgctggt
     3961 gccttcgcgc atgtcctcgg tggcgaacag caggccgaac tgtgcgcttt cgtactccag
     4021 gcccgcttcc aggctgcact cgccgcccac atgcaccgca tcgagcagac cacgcagcgc
     4081 cagcggcgcc gaacgtgcca gctggcgggc cacgtcctgc acgcggctgt ccagcgcgtc
     4141 ggcgggcacc acctcgttga cgatgcccag ttccagcgct cgtgctgcat tgaccggtgc
     4201 acccagcagg cacagctcca gggtggcggc acggccgcac aggcgcagca ggcgctggct
     4261 gccaccgaag cccgggatca ggccgaggtt gatttccggt tggccgacct tggcggtatc
     4321 ggcggcgatg cgcaggtggc aggccatcgc cagttccagg ccgccaccca gcgcaaaacc
     4381 attcacgcgc gcgatgaccg gcttgggcat gcgttcgatc tggcgcatca ggccctggcc
     4441 gagcagcgag aaatcacgtc cctgaacggc gctgagcgtg ttcatctcgg cgatatcggc
     4501 gccggccacg aaggccttgg ggccggcgcc ggtcagcacc accacgcgta cctccgggtc
     4561 ggcggcggcg gcgctgaacg cctcggccag ggcctgcagg gtcgcggcat tcagggcgtt
     4621 gagcttgtcc gggcgctgga cggtcacggt gcggatggcg ccgtcgtcgg cgacagcgat
     4681 cagggcatcg gccacgggga aactcctgga acgttaaaaa aaagtgagat tgaactccgc
     4741 gaaggcagac gggtcatagc ctgcatcgtg agtagcggtt acacgttgcg cccgttatcc
     4801 taacccgtcg cctcagggcg gcgcagaacg tccctgagtt accacccctg gagaactgtt
     4861 tgatgaagtt gcgttctatc gcggtcgccg tcgcggccct ggccctgacg ggcaatgcct
     4921 tcgcccagga cgtttcgtcc gaaaagggca agctgagcta ctacttcggt tacgactacg
     4981 gcaacaacct ggcggagctg accggtcgcg gtgagcagct ggacatcaac tcggtggtga
     5041 agggcctgca ggacgcctac gccaagaagc agccggcgat caccgccgag cagctgaagc
     5101 cggccgttga agcgttccag aagcgcgagc agggccgtgc ccaggccgcc aaggccgagt
     5161 acgaaaaggc cgctgccgaa aacaagacca agagcgatca gttcatcgcg gcgaacaagg
     5221 ccaaggccgg cgtgcagtcc ctgccgagcg gcgtccagta ccgcgtgatc gaagccggca
     5281 agggtgccaa gccgacccag gccagcaccg tgcagctgga agtggccggt ccgttcccgt
     5341 acggccagcg tccgaccgaa gcccgtccgg cccagcagat cccgtcgatc aaggtcagcg
     5401 aagttgaaat gaaggccatg cgcgagaccc tgctgcagat gccggcaggc tcgaagtggg
     5461 aagtcaccct gccgccggac caggcctacg gtgccgaccc gcgcaccccg ttcccgccga
     5521 acgtggctgt gcagttcgag atcaagctgg tcagcgtcaa gtaacatcaa agcagtaaac
     5581 gaaacgcgcc ggtgatccca ccggcgcgtt tttgtttgtg cagtgcctga cgcgcaaatc
     5641 cagcccattc gcgctactgt tgcagggtgc aaacaacgga agaatcggcg cgtgttgtcg
     5701 caagtccctg catcggagtg tgcaagctgg atccagaccg gcagtgcacc ggctgcgggc
     5761 ggcatctcga cgagatcgca aggtggtcgt cgatgagcaa cgaggaacgc agccgcatcc
     5821 tgcatcgcgt gcaacccctg cgtgaacagc tgcagcaatc attgcgtggc tcgctggccg
     5881 atcacgaacg cctgatgcgc gcgctgcatc cactggccga gccgccggcc ggcgacggct
     5941 ggaaccgcag cgaactgagt gacctgctgc cgcccgggcc acccgtggaa gccgccgtgc
     6001 tggccggcat cgtgccgcgc gccaacggcg cacaggtcat cctcacccgt cgcaccgaaa
     6061 ccctgcgcac ccatggtggc caggttggct tccccggcgg acgcaccgaa ccggacgacc
     6121 gcgatgcact ggccgctgcg ctgcgcgaga gccaggaaga aatcgcgctg gcgcccggcc
     6181 aggtgcacgc gctgggctac cttgatccct tcgtgacgat caccggttac cgggtcacgc
     6241 cggtggtggc ggtggtggat ccggacttcg tgccggtgcc gcaacccagc gaagtggccg
     6301 aggtgttcga ggtgccgctg gactacctga tggctgccga caacctgcgc caggtcgaaa
     6361 tcaatcatcg cggccgcatc cgccacgtcc ttgaatacgg ctggccgggc cagcgcatct
     6421 ggggcgcgac cgcggccatc ctctacaacc tgcgtcgccg cctggagcaa gtgcaatgaa
     6481 gccgatcgat ccgccgtgga ccaccctggt cgatgtcgcc accctggccg ctgcattggg
     6541 cgagggcgtt cgcgtggtcg acgcacgtgc tactgccagt accgccgtac gcgtggtcga
     6601 tgcgcggtcc tcgctggctg atccgcaggc cggtggcggc cagtaccttg cagggcacat
     6661 cccgggtgcg gtctacgccg atctcaatcg cgacctgtcc gacctgtcgc gcgtgggcca
     6721 tggtcgccat ccgctgccgg acagcgacgc cttcgccgcg aagctgggcc aatggggcat
     6781 tggtccggat acccaggtgg tggtctacga cggcagcgac ggcagcatgg ccgccgcgcg
     6841 gctgtggtgg ttgctgcgcc tgctcggcca tggccgggtg gcggtgctcg acggcggcat
     6901 cgccgcctgg caggctgccg gccatccgct ggcaacgggg gaggaggcgg taacagcgct
     6961 gccggcctat ccggggcgtt tcgataccac ccagatcgcc aatgccgatg aaatctctgc
     7021 gcggctgaag cacgcgccgg gttggctggt cgacgcccgt gcgggcgaac gtttccgcgg
     7081 cgaggtggag ccgctggacc cggtcgccgg ccacgtaccg ggtgcggtca accggccgtt
     7141 cgccctgaac gtcctcgacg gccgcctgcg tgatgcacag gaactgcgcg ccgaactgca
     7201 gggcgtgatc ggcaaccgcg atccgcaaca ggtggtgctg atgtgcggct ctggcgtgac
     7261 ggcctgccat ctgctgctgg cgatggaatc ggccgggctg tccggcgcac gcatctacgc
     7321 cgattcctgg agcggttggg tcagcgacag cagccgcccg gtggccagcg gcgcgtgagc
     7381 aatccgggcc aggagcagtc gagcatggct cgactctaca aaggctcgtt ccgatcgatt
     7441 cgacgttcat ccacgcatgt cgtggatcta ccgtgtcgac caaggtcgac acccacccac
     7501 agcagt
//
LOCUS       DAOKIP010000191         7427 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.191,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000191 DAOKIP010000000
VERSION     DAOKIP010000191.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 7427)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7427)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7427
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.191"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(70..777)
                     /gene="hda"
                     /locus_tag="QEL58_003293"
     CDS             complement(70..777)
                     /gene="hda"
                     /locus_tag="QEL58_003293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaA regulatory inactivator Hda"
                     /protein_id="HDS1677729.1"
                     /translation="MGVPQLPLALHYPRDQRLETFIGAPDGALAQLRAIAVGASHDWV
                     YLEGAAGTGKTHQALAMCSSAEQAGRLPTYVPLASAVGRVRAALDGLESRELVALDGL
                     DEVAGNREDEIALFDFHNRARAAGVTVLYTAQKAPGELGLLLPDLRSRLGQCVRVLLQ
                     PLDEEGRAAVLRERALRRGLAIDEAAIEWLLSHTGRELGGLITLLDWLDRESLAAKRR
                     ITVPFLRQVLEEGRPRY"
     gene            complement(777..1946)
                     /locus_tag="QEL58_003294"
     CDS             complement(777..1946)
                     /locus_tag="QEL58_003294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HDS1677730.1"
                     /translation="MTLTPEAEIAQFLRRLKYILFAGLVGWVVWLLAPILTPFVLALA
                     LAWLGDPLVDRIEATGRSRMTGVVLVFAAMVLVIVALLLVLVPMIERQITTLIAVAPQ
                     AQAWLMEKGIPWFEQKTGLEVMQWLDPDRLIEWVRSHWQQAGGFATTFMGYVSRSGFA
                     MVTWVVNILLLPILAFYFLRDWDKLVERVASVIPRNHIGTISALARESNEVLGAFIRG
                     QFLVMLALGVIYAGGLSLVGLKLGLLIGLIAGLISFIPYLGATTGILMAVVAALVQAQ
                     GFDLKLLILVGVVFTVGQLLESYVLTPRIVGDKIGLHPVAVIFAVMAGGQLFGFLGML
                     LALPVAAVTNVLLRYAHQRYRQSELYVGEKPAIVLDGVVDQPHIILPDDKGPDLK"
     gene            complement(1943..3082)
                     /locus_tag="QEL58_003295"
     CDS             complement(1943..3082)
                     /locus_tag="QEL58_003295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2066 domain-containing protein"
                     /protein_id="HDS1677731.1"
                     /translation="MDVLMRRSLILTLLIALSLPVATMAQSGLRTEGDVATATGAYEA
                     EVPVNSQAEADRNGALARALSVVLGKLSGDRSVMSRPGVVQALRNAKDYVASYDYKQD
                     QSVSASGAPSFRTLLVARFREDDVDSLVSALGLPLWPQPRPKPVLWLAVDDGSGPRLV
                     SVQQANAARPLLNRAIERGYKLGLPSGGAAEQALAGAIWRQDSAAVARASSRYSPPMQ
                     LIGKLYRANGGWQADWVFVDNGRELNKWTSKDANAMRAMAAGADGAADALVKRYAKAG
                     VATGQAGTYRVVVTGINSADDYLRLAAGLREVPVVRNVTPLHASASQLELSLEMTTGL
                     AGFNRMLGDNGVLVPSAPLPALPTPIDDTTGTPVAAPVSNEYRLR"
     gene            3183..4241
                     /locus_tag="QEL58_003296"
     CDS             3183..4241
                     /locus_tag="QEL58_003296"
                     /EC_number="6.3.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine cyclo-ligase"
                     /protein_id="HDS1677732.1"
                     /translation="MTNTPSSAPSPLTYRDAGVDIDAGNELVERIKPLVKRSFRPEVM
                     GGLGGFGALFDLSNKYREPVLVSGTDGVGTKLKLAHQLNRHDTIGIDLVAMCVNDVLV
                     QGAEPLFFLDYFATGKLDIDTAAAVVGGIANGCTEAGCALIGGETAEMPDMYAPGEYD
                     LAGFTVAAVEKSELKDGASVAAGDVLIGIASSGPHSNGYSLVRRIYDRAGQPADLELE
                     GGVKLVDALMAPTRLYVKPILSLLKSHGDAIHGMAHITGGGLTENIIRVVPEGLGLDI
                     QASSWTLPPVFQWLQKEGAVADSEMWRTFNCGIGFVLIVAPDQLAAVSDAVKAQGLEH
                     WTIGQVVSAEGAERVHIG"
     gene            4262..4747
                     /locus_tag="QEL58_003297"
     CDS             4262..4747
                     /locus_tag="QEL58_003297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677733.1"
                     /translation="MDATPPVSPAPPPLATVPVFSAQDADHLRMLSIAHYVVGGLIAL
                     FSLIFILHIVLGISALTGHLPMNSGGQPTSPAEQRLFGWMFTIIGCVIVFGGVTLGAF
                     VAYAGRCLAGRRRYLLCLIVAGLACLFAPLGTVLGVFSLIILLRPQVKAAFEANVPSR
                     S"
     gene            4755..5192
                     /locus_tag="QEL58_003298"
     CDS             4755..5192
                     /locus_tag="QEL58_003298"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677734.1"
                     /translation="MASVPPPLNVPPGWTALQIGGHLHTLRILFCVYGGIQLALSVVL
                     LMAALGGYISESRTPTVGMSPVLLAAILAVAALAIGALGILSLTAANRLGQRCQRTLC
                     LVAAGAACLGGALGIALGVYALIVLLRADVAASFSEPGGAVVA"
     gene            5189..5842
                     /locus_tag="QEL58_003299"
     CDS             5189..5842
                     /locus_tag="QEL58_003299"
                     /EC_number="2.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014646240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylglycinamide formyltransferase"
                     /protein_id="HDS1677735.1"
                     /translation="MTARVAVLASGRGSNLQAILDAIGDGRLPADVVGVFSDRPGAAA
                     LQRVAPGLRWAHAPKEFSDRAAYEQALGDAVQASAPDWIVCAGYMRILGAAFVQRFEG
                     RLVNIHPSLLPLHKGLDTHARALEAGDAEHGASVHLVVPELDAGAVLAQVRVPVGPGD
                     DAQALAERVLAVEHPLLIATLQLLCAGRLTEREGQPQLDGHPLFSPLALDSAGNLNR"
     gene            5910..6737
                     /locus_tag="QEL58_003300"
     CDS             5910..6737
                     /locus_tag="QEL58_003300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005412504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3108 domain-containing protein"
                     /protein_id="HDS1677736.1"
                     /translation="MKTTTLLSTSLLLSLAVLPAAGWGQAQAPAASPSPAPVPAVQPP
                     AEPAAPVLPALAWEPPPLQPFTATYQAFYKSKEAGDASMQVTHTGGSQWRVDMQVVGR
                     RGFASVLGLNIEQSTVFEERGGVYAPLSQSTVRKGLFLGKKAVGTYNWQAGTAQWTGD
                     VKKERAQPIPLQPGDQSALLINLAIMRDARPGATMHYRYVDMGKVRQHDYQAAQQTEN
                     VEVGDLSYNALRVYRTNGGNNETILWIANGVPTPVRILQREDGEDRVDLRLIEYQGV"
     gene            6740..7423
                     /locus_tag="QEL58_003301"
     CDS             6740..7423
                     /locus_tag="QEL58_003301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3108 domain-containing protein"
                     /protein_id="HDS1677737.1"
                     /translation="MSTLTRPLTWIAAAALSMASLPAMALQPFKADYLASYMGMQANG
                     SMTLSSEGANKWRYTLQVKNQLADLSQSTVFEEVRGQLRPLSSQDRSALLVKKRNVQA
                     NYNWNSNQATWTGDIKPDRAGPIALKAGDMDALLINLAIARDLAAGKPLTYRMVDEGR
                     IKNMTYRVIGKESITVGGKSYEATKVSRADGNKELIAWIVPEFPVPARMLQRENDRDA
                     LDLTIKAMN"
BASE COUNT         1208 a         2639 c         2448 g         1132 t
ORIGIN      
        1 gcttttgacg ttgacgttga cgttgcttca gcgggtgcag ggcggcagcc ctgcaaacaa
       61 accccaccct cagtaacgag gccggccttc ttccagcacc tggcgcagga acggcacggt
      121 gatccgccgc ttcgccgcca gcgactcgcg gtccagccaa tccagcagcg tgatcaaccc
      181 acccagctcg cgcccagtgt gcgacagcag ccactcgatg gccgcttcat caatcgccag
      241 gccccggcgc agcgcgcgct cgcgcagcac cgccgcgcgg ccttcctcat ccagtggctg
      301 cagcagcacg cgcacgcact ggcccagccg cgaacgcagg tccggcagca gcaggcccag
      361 ttcgcccggt gccttctgcg ccgtgtacag cacggtcaca ccggcagcgc gcgcgcggtt
      421 gtggaaatcg aacagagcga tctcgtcctc gcggttgccg gccacttcgt ccaggccgtc
      481 cagcgccacc agctcgcgcg actccagccc atccagcgcc gcgcgcacac ggcccacagc
      541 gctggccagc ggcacgtagg tcggcaggcg gccggcctgc tcggcactgg aacacatcgc
      601 cagcgcctga tgggtcttgc ccgtacccgc cgcgccttcc aggtagaccc aatcgtggct
      661 cgcgccgacc gcgatcgcac gcagctgcgc cagcgcgcca tccggcgcgc cgatgaaggt
      721 ctccaggcgc tggtcccgcg ggtaatgcag ggccagcggc agttgcggca cacccatcac
      781 ttcaggtcgg ggcccttgtc atccggaaga atgatatgag gctggtcgac cacgccatca
      841 agcacgatcg ccggcttctc acccacgtac agctcgctct ggcggtagcg ctggtgggca
      901 tagcgcagca gcacgttggt caccgccgcc accggcagcg ccagcagcat gccgaggaat
      961 ccgaacagct ggccaccggc catcaccgcg aagatcaccg ccaccgggtg cagaccgatc
     1021 ttgtcgccaa cgatgcgcgg ggtcagcacg tagctttcca gcagctggcc gacggtgaac
     1081 accacgccga ccaggatcag cagcttcagg tcgaagccct gtgcctgcac cagcgcggcc
     1141 accaccgcca tcaggatgcc ggtagtcgcg cccaggtacg ggatgaagct gatcagcccg
     1201 gcaatcaggc cgatcagcag gcccagcttg agcccgacca gcgacaggcc accggcgtag
     1261 atgacgccca gcgccagcat caccaggaac tggccgcgga tgaacgcgcc cagcacctcg
     1321 ttggactcac gcgccagcgc gctgatggtg ccgatgtggt tgcgcgggat caccgacgcc
     1381 acccgttcga ccagcttgtc ccagtcgcgc aggaagtaga acgccaggat cggcagcagc
     1441 aggatgttga ccacccaggt caccatcgcg aaacccgagc gcgagacgta gcccatgaag
     1501 gtggtggcga agccgccggc ctgctgccag tggctgcgca cccattcgat cagtcggtcc
     1561 ggatccagcc actgcatcac ttccaggccg gtcttctgct cgaaccaggg aatccccttc
     1621 tccatcagcc acgcctgtgc ctgtggcgcg accgcgatca gggtggtgat ctggcgctcg
     1681 atcatcggca ccagcaccag cagcaacgcc acgatcacca gcaccatcgc cgcgaacacc
     1741 agcaccacgc cggtcatgcg cgagcggccg gtggcctcga tgcggtcgac cagcgggtcg
     1801 cccagccagg ccagcgccag cgccagcacg aacggggtca ggatcggcgc cagcagccac
     1861 accacccagc cgaccaggcc agcgaacagg atgtacttca ggcggcgcag gaactgcgcg
     1921 atttccgctt caggggtcag ggtcatcgca ggcggtactc gttgctgacc ggcgcggcga
     1981 ccggagtacc ggtggtgtca tcgatcgggg tcggcagggc cggcagcggc gcgctcggca
     2041 ccagcacgcc gttgtcgccc agcatgcggt tgaagccggc caggccggtg gtcatctcca
     2101 ggctcagctc cagctggctt gccgaggcgt gcagcggggt gacgttgcgc accaccggca
     2161 cctcgcgcag gccggcggcc aggcgcaggt agtcgtcggc gctgttgatg ccggtcacca
     2221 ccacgcgata ggtgccggcc tggccggtag ccacgcccgc cttggcgtaa cgcttgacca
     2281 gcgcatcggc ggcaccgtcg gcgccggcgg ccatcgcgcg catggcgttg gcgtccttgc
     2341 tggtccactt gttcagttca cggccgttgt cgacgaacac ccagtccgcc tgccagccgc
     2401 cattggcgcg gtacagcttg ccgatcagct gcatcggcgg cgaatagcgc gaggaggcgc
     2461 gggccacggc ggcactgtcc tggcgccaga tggccccggc cagcgcctgc tcggcggcgc
     2521 cgccgctggg caggcccagc ttgtagccac gctcgatggc gcggttcagc agcgggcggg
     2581 cggcattggc ctgctgcacg ctgaccaggc gcgggccgct gccgtcatcg accgccagcc
     2641 acagcaccgg cttcggccgc ggctgcggcc acagcggcag gcccagcgcc gacaccagtg
     2701 aatccacgtc atcctcgcgg aagcgcgcca ccagcagggt gcggaagctg ggggcgccgc
     2761 tggcgctcac gctctggtcc tgcttgtagt cgtagctggc cacgtagtcc ttggcattgc
     2821 gcagtgcctg caccacgccg gggcgggaca tcacgctgcg atcgccggac aacttgccca
     2881 gaaccacgct cagcgcgcgg gccagggcgc cgttgcgatc ggcttcggcc tggctgttga
     2941 cgggcacttc tgcctcgtac gcgccagtgg cggtggcgac atcaccctcg gtgcgcaggc
     3001 cgctctgggc catcgtggcc accggcaggc tcagtgcaat gagcagggtc agaatcaggc
     3061 tgcggcgcat caggacatcc attggctcga cgtatccggg gggaattgtt gcccgaatac
     3121 ggactttgcg ccaatgcggc ctgttaaaat cgcccgttca acccctgcca gcgccgacgc
     3181 ccgtgaccaa caccccgtct tccgccccct cccccctcac ctaccgtgac gcgggtgtcg
     3241 acatcgacgc cggcaacgag ctggtcgaac ggatcaagcc cctggtcaag cgcagcttcc
     3301 gcccggaagt gatgggtggc ctgggtggct tcggcgccct gttcgacctg tccaacaagt
     3361 accgcgagcc ggtgctggtg tcgggtaccg acggcgtggg caccaagctg aagctggccc
     3421 accagctgaa ccgccacgat acgatcggca tcgacctggt cgccatgtgc gtgaacgacg
     3481 tgctggtgca gggcgccgag ccgctgttct tcctggacta tttcgccacc ggcaagctgg
     3541 acatcgacac cgccgcggcg gtcgtgggcg gcatcgccaa cggctgcacc gaggccggct
     3601 gcgcgctgat cggcggcgaa accgctgaaa tgcccgacat gtacgccccg ggcgagtacg
     3661 acctggccgg cttcaccgtc gccgcggtcg agaagagcga actgaaggat ggtgccagcg
     3721 tcgccgccgg tgacgtgctg atcggcatcg cttcgtccgg cccgcactcc aacggctatt
     3781 cgctggtgcg ccgcatctac gaccgcgccg gccagccggc cgatctggag ctggaaggcg
     3841 gcgtgaagct ggtcgatgcg ctgatggcgc cgacccgcct gtacgtgaag ccgatcctgt
     3901 cgctgctgaa gtcgcacggc gacgccatcc acggcatggc ccacatcacc ggtggcggcc
     3961 tgaccgagaa catcatccgc gtggtgcccg aaggcctcgg cctggacatc caggcgtcgt
     4021 cctggaccct gccgccggtg ttccagtggc tgcagaagga aggcgcagtg gccgacagcg
     4081 agatgtggcg caccttcaac tgcggcatcg gcttcgtgct gatcgttgca ccggaccagc
     4141 tcgctgccgt gtccgacgcg gtcaaggcgc agggcctgga gcactggacc atcggccagg
     4201 tggtcagcgc cgaaggcgcc gagcgcgtcc acatcggctg atcgcacacc caggagcccg
     4261 catggacgca acgccccccg tgtcacctgc cccaccgcct ctggcgacgg tgccggtgtt
     4321 cagcgcgcag gatgccgacc acctgcgcat gctgtccatc gcgcactacg tggttggcgg
     4381 cctgatcgcg ctgttctcgc tgatcttcat cctccacatc gtgctgggca tcagcgcact
     4441 gaccggccac ctgccgatga actccggtgg ccagcccacg tcgccggccg agcagcgcct
     4501 gttcggctgg atgttcacca tcatcggctg cgtcatcgtg ttcggtggcg tgacgctcgg
     4561 cgcgttcgtc gcctatgccg ggcgctgcct ggccggccgc cgccgctacc tgctgtgcct
     4621 gatcgtggcc ggcctggcct gcctgttcgc gccgcttggc acggtgctgg gggtgttcag
     4681 cctgatcatc ctgctgcgtc cgcaggtgaa ggcggccttc gaagccaacg ttccttcccg
     4741 cagctgagat ttccatggct tccgtcccgc ccccgttgaa cgtgccgcct ggctggaccg
     4801 cgctccagat cggcggtcac ctgcacacgc tcaggatcct gttctgcgtc tacggcggca
     4861 tccagctggc gctgtccgtt gtcctgctga tggccgcact gggtggctac atcagcgaaa
     4921 gccggacccc cacggtgggc atgtcgcctg tgctgctggc ggcgatcctt gctgtcgcgg
     4981 cgctggccat cggtgcactg ggcatactca gcctgaccgc tgcgaaccgg ctggggcagc
     5041 gctgccagcg cacgttgtgc ctggtggcgg ccggtgccgc ctgcctgggc ggcgcgctgg
     5101 gcatcgcgct gggcgtatac gccctgatcg tgctgctgcg tgcggatgtc gccgccagct
     5161 tcagcgaacc aggcggcgcg gtggtcgcat gaccgctcgc gttgcggtac tggcctccgg
     5221 ccgtggcagc aatctgcagg ccatcctcga cgcgatcggc gacggccgcc tgccggccga
     5281 cgtggtcggc gtgttctccg accgtccagg tgccgcagcg ctgcagcggg tggcaccggg
     5341 cctgcgctgg gcacacgcgc cgaaggagtt cagcgaccgc gccgcctatg agcaggcgct
     5401 cggcgatgcc gtgcaggcat cggcgccgga ctggatcgtc tgtgccggct acatgcgcat
     5461 cctgggggct gccttcgtgc agcgcttcga gggccgcctg gtcaacatcc acccctcgct
     5521 gctgccgctg cacaagggcc tggacaccca tgcgcgggcc ttggaagccg gcgatgccga
     5581 gcacggcgcc agcgttcacc tggtggtacc ggaactggat gccggggcgg tgctggcgca
     5641 ggtacgggtg ccggtggggc ccggcgacga tgcgcaggcg ctggccgagc gcgtgctggc
     5701 ggtggagcac ccgttgctga tcgccaccct gcagctgctg tgcgccggcc gcctgactga
     5761 acgggaagga cagccccagc tggatggtca ccccctgttt agcccgttgg ccctagattc
     5821 cgccgggaac ctgaaccggt aacgcccgtg cacacgcccc gctgactgcg gggctggcat
     5881 cctgcccctc cctgcggtcc ctgtccttca tgaagaccac gaccctgctg tccacttcgc
     5941 tgctgctgtc gctggctgta ttgcccgctg cgggctgggg ccaggcgcaa gcgcctgccg
     6001 cctcgccttc cccggcgccg gtgcctgccg tgcagccgcc tgccgagccg gcggcgccgg
     6061 tgttgcctgc gctggcgtgg gaaccaccgc cgttgcagcc gttcaccgcc acctaccagg
     6121 cgttctacaa gagcaaggag gccggcgacg ccagcatgca ggtcacccac accggcggca
     6181 gccagtggcg ggtcgacatg caggtggtgg gccgccgcgg ctttgccagc gtgctcggcc
     6241 tgaacatcga gcagagcacg gtgttcgagg aacgcggcgg tgtttacgcg ccactgagcc
     6301 agagcacggt gcgcaagggc ctgttccttg gcaagaaggc cgtgggcacc tacaactggc
     6361 aggccggtac cgcgcagtgg accggtgacg tgaaaaagga acgtgcgcag ccgatcccgc
     6421 tgcagcccgg cgaccagagc gcgctgctga tcaacctggc gatcatgcgc gatgcgcgcc
     6481 cgggtgccac catgcactac cgctacgtgg acatgggcaa ggtccgccag catgactacc
     6541 aggccgcgca gcagaccgag aacgtcgaag tcggcgacct gtcctacaac gcgctgcggg
     6601 tctaccggac caacggcggc aacaatgaaa ccatcctctg gatcgccaac ggtgtcccca
     6661 ccccggtgcg catcctgcaa cgcgaagacg gcgaagaccg cgtcgacctc cgcctgatcg
     6721 aataccaagg agtctgagca tgagcaccct gacccgcccc ctcacctgga tcgccgcggc
     6781 cgccctgtcg atggccagcc tgccggccat ggccctgcag ccgttcaagg ccgattacct
     6841 ggccagctac atgggcatgc aggccaatgg cagcatgacc ctgagcagcg agggagccaa
     6901 caagtggcgc tacacgctgc aggtgaagaa ccagctggcc gacctgagcc agagcaccgt
     6961 gttcgaagaa gtgcgcggcc agctgcgccc gctcagcagc caggaccgtt cggcgctgct
     7021 ggtgaagaag cgcaacgtgc aggccaacta caactggaac agcaaccagg ccacctggac
     7081 cggcgacatc aagccggacc gcgcgggccc gatcgcactg aaggccggtg acatggatgc
     7141 actgctgatc aacctggcga tcgcccgcga cctggccgcc ggcaagccgc tgacctatcg
     7201 catggttgac gaagggcgca tcaagaacat gacctaccgc gtgatcggca aggagtcgat
     7261 caccgtgggt ggcaagagct acgaagccac caaggtctcg cgtgccgacg gcaacaagga
     7321 actgatcgcc tggatcgtcc ccgagttccc ggtgccggcg cgcatgctgc agcgtgagaa
     7381 cgatcgcgac gcgctggacc tgaccatcaa ggcgatgaac tgacgcg
//
LOCUS       DAOKIP010000192         7341 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.192,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000192 DAOKIP010000000
VERSION     DAOKIP010000192.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 7341)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7341)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7341
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.192"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..775)
                     /locus_tag="QEL58_003302"
     CDS             complement(<1..775)
                     /locus_tag="QEL58_003302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008264849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4349 domain-containing protein"
                     /protein_id="HDS1677738.1"
                     /translation="MPVLLLALAACAQSGQRAAEAGASAADAAIASPEGAFLAYEHDV
                     QVQLDAAQIAPRIRQIAQACQSATFGDCAVLQVDQRSGEQPSGEVKVRIAPKGTEPLI
                     AMAGEGGTLQSRSTRAEDLAQQVADTALTRARLEKEHARLLSYQDRKDLKVEDLMAIT
                     TRLSEIEAGVEQANKDAAQQRRRIDTQLVTIHFDTTSGQRSRSEIGDALRESGSILNT
                     SVAFLIRAAAALLPVGVLALIAAWGVRAWLRRRRRRKLPP"
     gene            complement(808..1164)
                     /locus_tag="QEL58_003303"
     CDS             complement(808..1164)
                     /locus_tag="QEL58_003303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010486371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GFA family protein"
                     /protein_id="HDS1677739.1"
                     /translation="MEYQGSCHCGRIAFTVQAETPISDVIDCNCSMCRRRGGLLWFAP
                     REAFQLTTAPADVATYHFNKAHIDHHHCRECGIAPYSEAVDPRTGAPMVAVNVRCVPQ
                     VDLATLAVMSYDGAAL"
     gene            1277..3085
                     /locus_tag="QEL58_003304"
     CDS             1277..3085
                     /locus_tag="QEL58_003304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010366861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF885 domain-containing protein"
                     /protein_id="HDS1677740.1"
                     /translation="MRPHLLALALVAALAGCQPADAPTTGSTPAASQQAGDAAVDAAF
                     ADLSKRALDTWMQLSPVSATQIGDHRYDSELDDLSAAGQQKTVAAYKALLGELDKIEV
                     AKLGRENQVDAAILRNQLQSEIWNAEVLQSGKWDPQLYNGIAGSAIYGLMAREFAPLP
                     ERLKSATARMEKLPAIFAQARENLDPARVPKIHAETVAKQNKGILSIVDTFITPHIGE
                     LPQADQQRLQAAIDGLKKAVDEQQTWLDKTLVPNAKGDFRIGAEKYDQKLKFALSSSL
                     SRQEIGERARAELKRVREDMYGIAQTVLKDKPGAPEMPAQPTDEQQQKAIEAALELAY
                     ADKPARDKVVDDAKAALEQSTAFVREHDLVTLPDAPVDIILMPEFQRGVAVAYCDSPG
                     PLDKNLKTFYAVSPIPDDWNDKQVDSFLREYNSRMIHLLSIHEGTPGHYLEGWHSAKF
                     PSTLRAVLRSGLFAEGWAVYTERMMQEQGYLNNDPLFHLVQLKFYLRTISNAILDQGV
                     HVDNWDREKAMHLMTHDAFQQESEAAGKWVRAQLTSAQLPTYFVGAQEHFDTRKAVQE
                     RLGDKFSLKAYHDQVLSYGAPPVRFARQLMLDQPIE"
     gene            3230..4228
                     /locus_tag="QEL58_003305"
     CDS             3230..4228
                     /locus_tag="QEL58_003305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012479599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide lyase"
                     /protein_id="HDS1677741.1"
                     /translation="MSLPLLRLGLLSAALTAGVVHAACPSPPIGHPDIRALGYYTDKA
                     GSVIDPALHQQNHDATAPLDRYAADVARMSDDYLRDGSPAAAQCTLAWLGAWAKDGAM
                     LGQMIRVNNDQSFYMRQWMLDAVAMAYLKVHDQADPQQRARIDPWLQQLARANLAYWD
                     NPKRRRNNHYYWGGLGVLATGLATDDEALWRAGHAAFQKGIDDIQDDGSLPLEMARGQ
                     RALHYHDYALAPLVMMAELARLRGQDWYASRDHAIDRLARRVIEGSKDPAWFNEQTGV
                     AQLPLQASGWVEFYRLRSPDGGLFDAAHARGPFHSPRLGGDLTLMATHGIVRAPLR"
     gene            complement(4238..5449)
                     /gene="agp"
                     /locus_tag="QEL58_003306"
     CDS             complement(4238..5449)
                     /gene="agp"
                     /locus_tag="QEL58_003306"
                     /EC_number="3.1.3.10"
                     /EC_number="3.1.3.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008268336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional glucose-1-phosphatase/inositol
                     phosphatase"
                     /protein_id="HDS1677742.1"
                     /translation="MIALLLALSLATPAATAATAPVEGDQLEQVVLLSRHNLRAPVVA
                     SGALANATAETWPRWDVAAGELTTKGGVLEVYMGRYMGQWLRQAQLLPVSDCPQPADF
                     HAHANSLQRTQATAQFFVAGAFPGCHVTVEQRMPLGTMDPLFNPVIHRDDAAFRERAQ
                     LAMQQALARSQLAPALSVVEAITRYPQSAACEGNGDCRLTLAGTRFSADAGKEPRVFG
                     SLALASGLVDALLMEHYQGSGIPREGWGRLNTEAQWQALAQIRNGYQDILFGPPEVAR
                     DVAGPLLERVGALLEDPASPKVNLLVGHDSNIGSVLAALGITDYTLPGQYEKTPIGGL
                     LQFERWRDRHSGAERIRLAYVYPTSAQLRDAQPLTEAQPPGRVALRVPGCAAQGCTVA
                     EFQRLLHPAAR"
     gene            complement(5446..7278)
                     /gene="smrA"
                     /locus_tag="QEL58_003307"
     CDS             complement(5446..7278)
                     /gene="smrA"
                     /locus_tag="QEL58_003307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012479597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux ABC transporter SmrA"
                     /protein_id="HDS1677743.1"
                     /translation="MFRWFESLIPVFPPVDGRMPPRKVLPFYLHYLRPVWPVLLATLI
                     AGLLLALVEVAMFDYLGRIVDMVAEQPGADFFTRHANELGWMLFITVIARPILVGLHN
                     LLVNQAIVPGLSNRSRWLMHNYVVRQSLSFFQNDFAGSVANRVMQTGTSLRESAVQMV
                     DSLWYIVVYTGTALYLFAQADWRLMVPLILWLLAYAVILFYFVPRAKERAWIASEARS
                     KAMGRIVDGYTNIPTLKLFAHGGREQAYVAESIQELAVKHRAQTRITTGMDLTIAIVN
                     GFLIAGTCGLALWLWNGGHITVGAITLATGLVIRIHNMSGWIMWTINGIFEDIGTVQD
                     GITTIAQPLTVQDREDAVPLQVTRGGVHFQDIHFHYGKKGGVIAGLDLVVKPGEKIGL
                     VGPSGAGKSTLVNVLLRLYDLESGRILIDDQDIAHVTQESLRQQIGVVTQDTSLLHRS
                     IRDNLLYGRPDATEEQLRAAVAKARAEAFIDTLVDGQGRRGYDAHVGERGVKLSGGQR
                     QRIAIARVLLKDAPILVLDEATSALDSEVEAAIQDSLDELMGGKTVIAIAHRLSTIAR
                     MDRLVVMDQGRIVETGTHAELIAAGGLYARLWARQTGGFVAADQ"
BASE COUNT         1257 a         2534 c         2410 g         1140 t
ORIGIN      
        1 tgggcggcag cttgcggcga cgacgacggc gcaaccacgc gcgcacgccc caggcggcga
       61 tcaatgccag cacgcccacc ggcagcaacg cggcggcggc acggatcagg aacgcaacgc
      121 tggtgttgag gatgctgccc gattcacgca gtgcgtcacc gatctcgctg cggctgcgct
      181 ggccggaggt ggtgtcgaaa tggatcgtca ccaactgggt atcgatgcgc cggcgctgct
      241 gtgcggcatc cttgttggcc tgctcgacgc cggcctcgat ctccgacagg cgcgtggtga
      301 tcgccatcag gtcctcgacc ttcagatcct tgcggtcctg gtaggacagc agccgcgcat
      361 gctccttctc cagccgcgcc ctggtcagtg cggtgtcggc cacctgctgc gcgaggtcct
      421 cggcgcgcgt actgcgcgac tgcagcgtgc cgccctcgcc ggccatggcg atcaacggct
      481 cggtcccctt gggcgcgata cgcaccttga cctcaccact gggctgctcg ccactgcgct
      541 ggtcgacctg cagcaccgcg cagtcgccga acgtcgcgct ctggcaggcc tgggcgatct
      601 gccggatgcg gggcgcgatc tgcgccgcgt ccagctgtac ctgcacgtca tgctcgtagg
      661 caaggaacgc gccttccggc gaagcaatgg cggcgtcggc cgcactggcg cctgcttccg
      721 ccgcccgctg gccactctgg gcgcaggcag ccagcgccag cagcagcacc ggcatcgccg
      781 cggcccgcgt ccacgcacgc agcggcctca aagcgcagct ccgtcgtagg acatcaccgc
      841 cagcgtggcc aggtccacct gcggcacgca gcgcacgttc accgccacca tcggcgcgcc
      901 ggtacgcgga tccaccgctt cgctgtacgg cgcgatgccg cattcgcggc aatggtggtg
      961 gtcgatgtgc gccttgttga agtggtaggt ggccacgtcg gccggggcgg tggtcagctg
     1021 gaacgcctcg cgcggggcga accacagcag gccgccgcgg cgccggcaca tcgagcagtt
     1081 acagtcgatg acatcgctga tcggcgtttc ggcctgtacg gtgaatgcga tcctgccgca
     1141 atggcagctt ccctggtatt ccatgtcctg cgctccactg gagagtcctt gtcggcgccc
     1201 atggtaatcc tatggcaggg ggacaaagca gcctcagcgg cctatgctcg cggtttgacc
     1261 ctgtacagga acgccgatgc gcccgcatct ccttgccctc gccctggtcg ccgccctggc
     1321 cggttgccag ccggccgacg ccccgaccac cggttccacc ccggccgcca gccagcaggc
     1381 cggtgacgcc gccgtcgatg ccgccttcgc cgatctgtcc aagcgcgccc tggacacctg
     1441 gatgcagctg tcgccggtca gcgccaccca gatcggcgac caccgctacg acagcgagct
     1501 ggacgacctg agcgccgccg gccagcagaa gaccgtggcc gcctacaagg cgctgctggg
     1561 cgagctggac aagatcgagg tggccaagct gggccgcgag aaccaggtgg acgcggcgat
     1621 cctgcgcaac cagctgcagt cggaaatctg gaacgccgaa gtactgcagt ccggcaagtg
     1681 ggacccgcag ctgtacaacg gcattgccgg cagcgcgatc tatggcctga tggctcgcga
     1741 attcgcgcca ctgccggaac gcctgaagtc ggctaccgca cgcatggaaa agctgccggc
     1801 gatcttcgcc caggcccgcg agaacctgga cccggcccgc gtgccgaaga tccatgccga
     1861 gacggtggcc aagcagaaca agggcatcct cagcatcgtc gataccttca tcaccccgca
     1921 catcggtgaa ctgccgcagg ccgaccagca gcgcctgcag gccgccatcg acggcctgaa
     1981 gaaggcggtg gacgagcagc agacctggct ggacaagacc ctggtgccga acgccaaggg
     2041 cgacttccgc atcggtgcgg aaaagtacga ccagaagctg aagttcgcgc tgagttcgtc
     2101 gctgtcgcgc caggagatcg gtgagcgtgc gcgcgccgaa ctcaagcgcg tgcgcgaaga
     2161 catgtatggc atcgcgcaga ccgtgctgaa agacaagccg ggcgcgccgg agatgccggc
     2221 ccagccgacc gacgagcagc agcagaaggc gatcgaagcc gcgctggagc tggcctacgc
     2281 cgacaagccg gcacgcgaca aggtggtcga cgatgccaag gccgcgctgg agcagtccac
     2341 cgcgttcgtg cgcgagcacg acctggtgac cctgcccgac gcgccggtgg acatcatcct
     2401 gatgccggaa ttccagcgtg gcgtggccgt ggcctactgc gattcgccgg gcccgctgga
     2461 caagaacctg aagaccttct acgccgtgtc gccgattccg gacgactgga acgacaagca
     2521 ggtcgactcg ttcctgcgtg agtacaactc gcgcatgatc cacctgctga gcatccacga
     2581 aggcaccccg ggccactacc tggagggctg gcactcggcc aagttcccct ccaccctgcg
     2641 tgcggtgctg cgttcgggcc tgttcgccga aggctgggcg gtctacaccg agcgcatgat
     2701 gcaggagcag ggttacctca acaacgaccc gctgttccac ctggtgcagc tgaagttcta
     2761 cctgcgcacg atctccaacg cgatcctcga ccagggtgtg cacgtggaca actgggatcg
     2821 cgaaaaggcg atgcacctga tgacccacga cgcgttccag caggaaagcg aagcggccgg
     2881 caagtgggtg cgtgcacagc tgacctcggc gcagctgccg acctacttcg tcggtgcgca
     2941 ggaacacttc gatacgcgca aggcggtgca ggaaaggctg ggcgacaagt tcagcctgaa
     3001 ggcgtaccac gaccaggtgc tgtcctacgg cgcaccgccg gtgcgcttcg cccgccagct
     3061 gatgctggac cagccgatcg agtgatcgcg ccggtgtgaa gtgaacaagc gcggcccggg
     3121 gagacccggg ccgttctgtt tgtgcaggat cgccacgcca tgcccgcatc acatgagggc
     3181 aacatggcca ggcgcatcgt tcgccgggtt ccccatccca ttggtttcca tgtcgctccc
     3241 gttgcttcgt ctcggcctgc tctctgctgc cctgacggcc ggcgtcgtcc acgccgcctg
     3301 cccttcccca ccgatcggac accccgacat ccgcgccctg ggctactaca ccgacaaggc
     3361 cggttcggtg atcgacccgg cactgcacca gcagaatcac gatgccaccg cgccgttgga
     3421 ccgttatgcc gcggacgtgg cgcgcatgag cgacgactat ctgcgcgacg gtagccctgc
     3481 cgccgcgcag tgcacgctcg cctggctggg cgcatgggcg aaggacggcg cgatgctcgg
     3541 gcagatgatc cgggtcaaca acgatcagtc gttctacatg cggcagtgga tgctcgatgc
     3601 ggtggccatg gcctacctga aggtgcatga ccaggccgac ccgcagcagc gcgcgcgcat
     3661 cgatccgtgg ctgcaacagc tggcgcgtgc caacctggcg tactgggaca atccgaaacg
     3721 gcgccgcaac aaccactact actggggcgg cctgggcgtg ctggccaccg gtctggccac
     3781 cgatgacgag gccctgtggc gggccggcca cgctgccttc cagaagggca tcgatgacat
     3841 ccaggacgat ggcagcctgc cgctggaaat ggcgcgcggg caacgcgccc tgcactacca
     3901 cgactacgcg ctggcgccac tggtgatgat ggccgaactg gcgcggctgc gcggccagga
     3961 ctggtacgcc agccgggatc acgccatcga ccgccttgcc cgccgcgtca tcgaaggcag
     4021 caaggaccct gcatggttca acgaacagac cggcgttgca cagctgccgc tgcaggccag
     4081 cggctgggtc gagttctatc gtctgcgatc accggatggc ggcctgttcg atgcggcgca
     4141 tgcacgcggg ccgttccact cgccgcggct ggggggcgat cttaccctga tggccacgca
     4201 cggcatcgtg cgcgcgccgc tgcgttagcg gcgtggctca gcgggctgcc ggatgcagca
     4261 gacgctggaa ttctgcgacg gtgcagccct gtgccgcgca ccccggcaca cgtagcgcga
     4321 cgcggcccgg cggctgcgcc tcggtcagcg gctgcgcatc acgcagctgc gcgctggtcg
     4381 ggtagacgta ggccaggcgg atacgctccg ccccgctgtg gcggtcacgc cagcgctcga
     4441 actgcagcag gccaccgatc ggtgtcttct cgtactggcc tggcagcgtg tagtcggtga
     4501 tgcccagcgc cgccaatacg gaaccgatgt tggaatcgtg gccgaccagc aggttcacct
     4561 tcggcgaggc cggatcctcc aacaacgcac ccacgcgttc cagcagcggc ccggccacat
     4621 cccgcgccac ctcgggtggt ccgaacagga tgtcctggta gccgttgcgg atctgcgcca
     4681 gcgcctgcca ttgcgcctcc gtgttcaacc ggccccagcc ttcgcgcgga atgccacttc
     4741 cctggtagtg ctccatcagc agggcatcga ccagcccgct ggccagggcc agggatccaa
     4801 agacgcgcgg ctctttgccc gcgtctgcgc tgaagcgggt gccggccagg gtcagacggc
     4861 agtcaccatt accctcgcac gccgccgact gcggatagcg ggtgatcgcc tccaccacgg
     4921 acagtgccgg tgccagctgc gaacgtgcca acgcctgctg catcgccaac tgcgcgcgtt
     4981 cgcggaaggc cgcgtcatcg cggtggatca ccggattgaa cagcgggtcc atggtgccca
     5041 gcggcatccg ctgctcgacc gtgacatgac agcccgggaa ggcaccggcc acgaagaact
     5101 gcgcggtggc ctgggtgcgc tgcaggctgt tggcatgggc gtggaagtcg gccggctgcg
     5161 gacaatccga caccggcaac agctgtgcct gccgcagcca ctggcccatg tagcggccca
     5221 tgtagacctc cagcacgccg cccttggtgg tcagctcacc cgcagcgacg tcccagcgcg
     5281 gccaggtttc cgctgtcgcg ttggcaagag cgccggaggc caccaccggc gcgcgcaggt
     5341 tgtggcggct gagcaggacg acctgctcga gctggtcgcc ttccaccggc gctgtcgccg
     5401 cagtcgcggc cggagttgcc aggctgagtg ccagcagcag ggcaatcact gatcggccgc
     5461 cacgaaacca ccggtctgcc gcgcccacaa ccgcgcatac aggccgccgg ccgcaatcag
     5521 ttcggcatgg gtaccggtct cgacgatgcg gccctggtcc atcaccacca gccggtccat
     5581 gcgcgcgatg gtcgacagcc ggtgcgcgat cgcgatcacc gtcttgccgc ccatcagctc
     5641 gtccaggctg tcctggatcg ccgcttccac ttccgaatcc agcgccgagg tcgcctcgtc
     5701 cagcaccagg atcggtgcgt ccttcagcag cacgcgggca atggcgatgc gctggcgctg
     5761 gccaccggac agcttcacgc cacgctcgcc gacgtgggcg tcatagccac gacggccctg
     5821 cccgtccacc agcgtatcga tgaaggcctc ggcacgtgcc ttggccacgg cagcacgcag
     5881 ctgttcctcg gtcgcatccg ggcgtccgta cagcaggttg tcgcggatcg agcgatgcag
     5941 cagcgaggtg tcctgggtga ccacgccgat ctgctggcgc aggctttcct gcgtgacatg
     6001 ggcgatgtcc tggtcgtcga tcaggatgcg gccgctttcc aggtcgtaca ggcgcagcag
     6061 cacgttgacc agggtcgatt tgccggcgcc ggacgggccg accaggccga tcttctcgcc
     6121 cggcttcacc accaggtcca ggccggcgat cacgccgccc ttcttgccat agtggaagtg
     6181 gatgtcctgg aaatgcacgc cgccacgggt cacctgcagc ggcaccgcat cctcgcggtc
     6241 ctgcacggtc agcggctggg cgatggtggt gatgccatcc tgcaccgtgc cgatgtcctc
     6301 gaagatgccg ttgatggtcc acatgatcca gccggacatg ttgtggatgc ggatcaccag
     6361 accggtggcc agggtgatcg cgccgaccgt gatgtggccg ccgttccaca gccacagcgc
     6421 cagcccgcag gtaccggcaa tcaggaagcc gttgacgatg gcgatggtca ggtccatgcc
     6481 ggtggtgatg cgggtctgcg cgcggtgctt gaccgccagt tcctggatcg actcggccac
     6541 gtaggcctgc tcgcgcccgc catgggcgaa cagcttcagc gtggggatgt tggtgtagcc
     6601 atcgacgatg cggcccatcg ccttggaacg cgcctcggag gcgatccagg cccgttcctt
     6661 agcgcgcggc acgaagtaga acaggatgac cgcgtaggcc agcagccaca ggatcaacgg
     6721 caccatcagc cgccagtcgg cctgcgcgaa caggtacagc gcggtgccgg tgtagaccac
     6781 gatgtaccag agcgaatcga ccatctgcac cgccgactcg cgcagcgagg tgccggtctg
     6841 catcacccgg ttggcgacgc tgccggcaaa gtcattctgg aagaagctca ggctctgccg
     6901 caccacgtag ttgtgcatca accagcgcga acggttgctc aggcccggca cgatggcctg
     6961 gttgaccagc aggttgtgca ggccgaccag gatcggccgt gcgatgaccg tgatgaacag
     7021 catccagccc agttcgttgg cgtggcgcgt gaagaaatcg gcacccggct gctcggcgac
     7081 catgtcgacg atgcggccca ggtaatcgaa catggccact tccaccagcg ccagcagcag
     7141 gccggcgatg agcgtggcca gcagcaccgg ccataccggg cgcaggtagt gcaggtagaa
     7201 cggcagcacc ttgcgtggtg gcatccgccc atccacgggc gggaataccg gaatcaggga
     7261 ttcaaaccaa cggaacattg cattccctcg cctcttgcaa gcggcgaagt atcccacgcc
     7321 ggatgtgtac gccagccgac g
//
LOCUS       DAOKIP010000193         7286 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.193,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000193 DAOKIP010000000
VERSION     DAOKIP010000193.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 7286)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7286)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7286
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.193"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(10..1194)
                     /locus_tag="QEL58_003308"
     CDS             complement(10..1194)
                     /locus_tag="QEL58_003308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008264446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDS1677744.1"
                     /translation="MSGHAIDASSPAGEATRLPWAGLLALAGGGFITLLTETLPAGVL
                     RPMGDSLGVSDAAVGQLVSVYALGSVMAALPMTALTQRLPRRPLLLAAIAGFVVVNTL
                     TALSSSYALILAARFLAGVSGGLLWSLVAGYAARMVVPSLQGRAIAVAMVGSPLALSL
                     GVPAGTLLGQQIGWRWAFALMSLLGVGLLAYARWALPALPAAAAGQRMSLGMVWRMPG
                     VRSALLVMVLYVLAHNVLYTYIEPLAVEAGAGAWLDRLLLAFGIAAIAGIGIAGWGVD
                     RHLRTLVWAAVVGFLLPVLALLLWPGRPTPLLLATILWGVAFGSVATLFQTALARRAG
                     AAADLAQSMLVTGWNLAIAAGGMAGGVLLQARGASQLGWLPLLLLVVTAAWLLARPKA
                     WE"
     gene            complement(1191..2369)
                     /locus_tag="QEL58_003309"
     CDS             complement(1191..2369)
                     /locus_tag="QEL58_003309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010484155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-lactamase family protein"
                     /protein_id="HDS1677745.1"
                     /translation="MNAALSLEPVPTLPSVQRLLQQVHPLRLVGAVVLVRQHGVLRHA
                     GASGLADRESATPMQRDQLFRLASVSKPLLTTVILRLVADGVLDLDAPVQRWLPDFRP
                     ALADGSTPPISLRQLLSHSSGLGYRFLEADADGPYARAGVSDGMDASPVSLAENVRRI
                     AQAPLLFAPGSQWLYSLGVDVAGAVAEAATGETLQALFARLLAAPLGLRDTAFATADA
                     ARLATPYVSDMPQPHRLREGEIVSPFEGTVGIEYSLARATDASRFASAGAGLVGTADE
                     LMAVLEALRDVRASGLLPPALAAQMATPQVGEQGPPEPAGWGFGLGFALLRDGTASGT
                     PQCEGTWRWGGAYGHSWFVDPARGLSVVALTNTLYEGMDGAFVDALRNAVYADLEGAR
                     "
     gene            2598..3497
                     /locus_tag="QEL58_003310"
     CDS             2598..3497
                     /locus_tag="QEL58_003310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005407877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDS1677746.1"
                     /translation="MTVLDNLANLQTFVHAADTRSFVETGRLQGISASAAGKCVARLE
                     HALGVRLFHRSTRSITLTAEGQLFLARCRRILDERDAARTELAQPHATPRGTLRIGLP
                     LVGDLTLPLMAEFMAAYPDIRLDLDFSDRLVDVIEEGFDAVLRVGEPSDSRMNARRLG
                     VFPRRIVASPGYLQQRGVPRTPAELMQHTLLHYRFPSTGKLELWPIHWPEDETPQELP
                     VHMVANTIEARVALALRHVGVAFVPVHSVRDALADGRLVTVLDEHVHSCGIFHLLWPS
                     GRHVLPKLRVFIDFVSARLETVP"
     gene            3730..5337
                     /locus_tag="QEL58_003311"
     CDS             3730..5337
                     /locus_tag="QEL58_003311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATP-binding cassette
                     domain-containing protein"
                     /protein_id="HDS1677747.1"
                     /translation="MTPHSLTLDRVSYRLADGRPLFSDLSFSFEPVATGLVGANGTGK
                     SVLARLLAGHLSADSGQVRRSGRVFLLPTPGYPPSGTVGALAGVGEALAALARIEAGS
                     VDEADFTCVGDRWDLRERLQQQWQAVGLPDDLDPAQPAARLSGGQAMQVALSGAWASG
                     ADWLILDEPSNHLDTRHRQQLYHQLQQWRGGLLAISHDRELLEQMQQIVELDARGLHR
                     YGGPWQHYADARAAEREAAAAQLDHARAQHRQQQRSAREQHERQQQRQARGNREAKQA
                     NQAPILLGRQKQRAEASHGRAQQVQADRLQASADQLRAAASAIHATPELALFAGDGER
                     GGARLLQAQSLVLPHGCSAPLQLEIRRGQRIAVVGDNGSGKSTLLRVLAGQLPARHGT
                     VHRHAPLALLDQQLLGLSGERSILDTVQATNPAADPAELRTRLALLGLDAQRILRPSG
                     SLSDGERVKGALASVLYADPAPQLLLLDEPGNALDLGALQALEDLLVAWPGALVMVSH
                     DRHLLQALRPTQVLQVTTDGWQWRDAV"
     gene            complement(5442..6767)
                     /locus_tag="QEL58_003312"
     CDS             complement(5442..6767)
                     /locus_tag="QEL58_003312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014645761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HDS1677748.1"
                     /translation="MNTVSRADRRLPVTVLSGFLGAGKTTLLNQILRNREGLRVAVIV
                     NDMSEVNIDAQLVREGGAELRRTEETLVEFSNGCICCTLRDDLLQEVRRLADAGRYDY
                     LLIESTGIGEPMPVAATFAVRDEHGFSLSDIARLDTMVTVVDGSAFLADFGSTLRLAE
                     RGQQAGPEDDRGVVDLLCEQVEFADVIVVSKVDQVDDEVLQDTLAVLRGLNRDAKLLL
                     SSFGDVPLSELLDTGRFDMERAQRAPGWVKELRGEHTPETEEYGIASFVYRSRRPFHP
                     ARFARALQSGMPGVIRSKGWFWLANRMDWVGELNTVGAATRTQAAGFWYAARERVRAG
                     QEDTTPLLPPTPLPYSDLGWARQQAECWSAPLPGLEEFPDMAAHSAMQRLWHPLWGDR
                     RQELVVIGVHMDERAVRAELDACLLNDQELRAGPLLWQQLPQAFPVWKR"
     gene            6837..7208
                     /locus_tag="QEL58_003313"
     CDS             6837..7208
                     /locus_tag="QEL58_003313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014645760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MerC family mercury resistance protein"
                     /protein_id="HDS1677749.1"
                     /translation="MKSPSAALLDAGAVALSSLCLLHCLALPLLAAALPLFGAWAEAE
                     WVHLLFVAIALPLTGYALWRAERRRPLPVLAWATAGIGLGLLLAGALALPSHGWETPL
                     TVTGSLLLAATHLWNARQRHG"
BASE COUNT         1165 a         2722 c         2373 g         1026 t
ORIGIN      
        1 gatcgccgtc tattcccacg ccttcggccg cgccagcaac cacgctgccg tcaccaccag
       61 caacagcaac ggcaaccatc ccagctggct ggcgccgcgc gcctgcagca gcacaccgcc
      121 tgccatgcct ccggcggcga tggccaggtt ccaaccggtc accagcatcg actgcgccag
      181 atccgcagcg gcaccggcgc ggcgcgccag cgcggtctgg aacagggtcg ccaccgagcc
      241 gaaggccacg ccccacagga tcgtcgccag cagcagcggg gtcggccggc ctggccacaa
      301 cagcagcgcc agcaccggca ggaggaagcc gaccaccgcc gcccagacca gcgtgcgcag
      361 atgacggtcc acgccccagc cggcaatacc gatgccggca atcgccgcga tgccgaacgc
      421 cagcaacagg cgatccagcc aggcaccggc accggcctcc accgccaacg gttcgatgta
      481 ggtgtagagc acgttgtgcg ccagtacgta cagcaccatc accagcagcg cactgcgcac
      541 accgggcatg cgccagacca tgcccagcga catgcgctgg ccggccgccg ccgctggcaa
      601 tgcgggcagc gcccagcgcg cgtacgccag cagtcccacg cccagcaggc tcatcaacgc
      661 gaacgcccag cgccagccga tctgctggcc caacaacgtg ccggcgggca cccccagcga
      721 caacgccaac ggtgagccga ccatggctac agcgatcgcc cggccctgca gcgaaggcac
      781 aaccatgcgc gccgcataac cggccaccag cgaccacagc aggccgccac tcaccccggc
      841 caggaagcgt gcggcgagga tcagcgcgta gctgctgctc aacgcggtca gcgtattgac
      901 caccacgaac ccggcaatcg ccgccagcag cagcggacgc cgcggcaggc gctgggtcag
      961 cgcggtcatc ggcagcgcag ccatcaccga gcccagcgca tacacgctca ccagctggcc
     1021 caccgccgca tcactcacac cgaggctgtc gcccatcggt cgcagtacgc cggccggcag
     1081 ggtctcggtc agcagggtga tgaagccgcc gccggccagt gccagcaggc ccgcccacgg
     1141 caggcgtgtg gcttcaccgg ccgggctgct cgcatcgatg gcatggccgc tcatcgggcg
     1201 ccctccagat cggcatagac cgcattgcgc agcgcatcga cgaaggcacc atccatgccc
     1261 tcgtacaggg tgttggtcag cgccaccacg ctcagcccac gcgccgggtc gacgaaccag
     1321 ctgtggccat acgcgccgcc ccagcgccag gtgccttcgc actgcggcgt gccgctggca
     1381 gtgccatcgc gcagcagcgc aaagcccagg ccgaagcccc agccggccgg ttccggcggg
     1441 ccctgctcgc ccacctgcgg ggtcgccatc tgcgccgcca gtgcgggcgg caacaggccc
     1501 gaggcgcgca cgtcgcgcaa cgcctccagc accgccatca gctcatcggc ggtgcccacc
     1561 agaccggcgc cggcagaggc gaatcggctg gcatcggtgg cacgtgcaag gctgtattcg
     1621 atgccgaccg tgccttcgaa cggcgacact atttcgcctt cgcgcaggcg atgcggctgc
     1681 ggcatgtcgc tcacataggg cgtggccagc cgcgcagcat cggcggtggc gaaggcggta
     1741 tcgcgcaggc ccagcggtgc ggccagcagg cgcgcgaaca gcgcctgcag ggtttcaccg
     1801 gttgcggctt cggccaccgc accggccaca tccacgccca gcgagtacag ccactggctg
     1861 ccgggtgcga acagcagcgg cgcctgcgcg atgcggcgca cgttctcggc cagggacacc
     1921 gggctggcat ccatgccatc gctgacgccg gcccgcgcgt aggggccgtc cgcatcggcc
     1981 tccaggaaac ggtagcccag cccgctgctg tggctgagca gctggcgcag gctgatcggt
     2041 ggcgtgctgc catcggccag cgccgggcgg aagtccggca gccaacgctg cacgggggca
     2101 tcgaggtcca gcacgccgtc ggccaccagg cgcaggatca ccgtggtcag cagcggcttg
     2161 ctgaccgagg ccagccggaa cagctggtcg cgctgcatcg gcgtggccga ttcgcggtcc
     2221 gccaggccgc tggcgccggc gtggcgcagc accccgtgct ggcgcaccag caccaccgcg
     2281 ccgaccaggc gcagcggatg cacctgctgc agcaaccgct gcaccgacgg cagcgtcggt
     2341 acgggttcaa gggaaagagc ggcattcatc gcggtgatcc gtgggggaga ggccgccacg
     2401 ttaggcagcc cgtcgccgcg caaaaagccg gtttccgctc cgggcatcat ggaccgtgca
     2461 gtccgcaatc ggcatcatgg ccggaactgc aaggccacaa ccgcccacaa cccgccccgc
     2521 accacagtgt tgcgagggcg gtgccaaccg ccgccagcgc gcccctctac cctgccgctt
     2581 tcatcgcccg cacgcccatg accgtcctgg acaacctcgc caacctgcag acgttcgtgc
     2641 acgccgccga cacccgcagc ttcgtcgaga ccgggcgcct gcagggcatc tccgcctcgg
     2701 ccgccggcaa gtgcgttgcc cggctggaac acgcgctggg cgtgcgactg ttccatcgca
     2761 gcacgcgcag catcaccctc accgccgagg gccagctgtt cctggcgcgc tgccggcgca
     2821 tcctcgacga gcgcgatgct gcgcgcaccg aactggcgca accacacgcc acgccgcgcg
     2881 gcacgctgcg catcggcctg ccgctggtgg gtgatctgac cctgccgctg atggccgaat
     2941 tcatggccgc ctatccggac atccgcctcg atctcgactt cagcgatcgg ctggtcgatg
     3001 tcatcgagga aggtttcgat gccgtgctgc gggtcggcga gcccagcgac tcgcgcatga
     3061 acgcgcggcg cctgggcgtg tttccgcgcc gcatcgtcgc ctcgcccggc tacctgcagc
     3121 agcgcggtgt tccgcgcacg ccggccgagc tgatgcagca cacgctgctg cactaccgct
     3181 tccccagcac cggcaagctg gagctgtggc cgatccactg gcccgaagat gaaaccccgc
     3241 aggaactgcc ggtccacatg gtggccaaca ccatcgaagc acgcgtggcg ctggcgctgc
     3301 gccacgtggg cgtggcgttc gtgccggtgc actcggtgcg cgatgcgctg gccgacggcc
     3361 ggttggtcac cgtgctggac gagcatgtgc attcctgcgg catcttccac ctgctgtggc
     3421 cctccggccg ccacgtgctg ccgaagctgc gggtgttcat cgatttcgtc agcgcacgcc
     3481 tggaaaccgt gccgtaggcg cgatcaatcc acaccacgca tggatgcctg tgtagagtcg
     3541 agccatgctc gacttaccgg atgcctggcg caccacaccc ggccattcag ccagccccgc
     3601 tatactggcg cctcattcct cccagaggct cgcgaccaat gcgccattga tgccgccgtc
     3661 ttcccatcag acggcctgac tcttcccgcc cctgcgcgca ggggagaacc cggcatccat
     3721 ggaggtcgca tgaccccgca ttccctcacg ctcgatcgcg tgtcgtaccg attggccgac
     3781 ggccgcccgc tgttttccga tctgtcgttt tcctttgaac cggtcgccac cggcctggtc
     3841 ggtgccaatg gcaccggcaa gagcgtgctc gcccgcctgc tggccggcca cctgtcagcc
     3901 gacagcggcc aggtgcgccg cagcggccgc gtgttcctgc tgccgacacc cggctatcca
     3961 ccctctggca cggttggcgc gctggccggt gtcggcgaag cactggccgc gctcgcgcgc
     4021 atcgaagccg gcagcgtgga cgaggccgac ttcacctgcg tcggtgaccg ctgggacctg
     4081 cgcgaacgcc tgcagcagca atggcaggca gtgggcctgc ccgacgacct cgaccccgcc
     4141 cagcccgccg cgcggctcag tggtggccag gccatgcagg tcgcgctgtc cggggcgtgg
     4201 gccagcggcg ctgactggct gatcctcgac gaacccagca accacctcga tactcgccat
     4261 cgccagcagc tgtaccacca gttgcagcag tggcgtggcg gcctgctggc gatcagccac
     4321 gaccgcgagc tgctggaaca gatgcagcag atcgtcgaac tcgatgcgcg tggactgcac
     4381 cgctatggcg ggccgtggca gcactacgcc gacgcgcgtg cggccgaacg cgaagccgcc
     4441 gccgctcagc ttgaccatgc gcgcgcacag caccggcagc agcagcgcag cgcgcgtgag
     4501 cagcacgaac gccagcaaca gcggcaggcg cgtggcaacc gcgaggcgaa gcaggccaac
     4561 caggcaccga tcctgctcgg ccggcagaag cagcgcgccg aggccagcca cggccgcgcg
     4621 cagcaggtgc aggccgatcg cctgcaggcc agtgccgatc aactgcgcgc tgccgcctct
     4681 gcgattcatg ccacgccgga actggcgctg tttgccggtg acggtgaacg cggcggcgcg
     4741 cgcctgctgc aagcgcaatc gctggtgttg ccgcatggct gcagtgcccc gttgcagctg
     4801 gagatccgtc gcggccagcg catcgccgtg gtcggtgaca atggcagcgg caagtccacg
     4861 ctgctgcgcg tgctggccgg ccagctgccg gcacgccatg gcaccgtgca tcgtcacgcc
     4921 cccctggcgc tgctcgacca gcagctgctg gggttgtccg gcgagcgcag catcctcgat
     4981 accgtgcagg ccaccaaccc ggcggccgat cccgctgaac tgcgcacgcg cctggccctg
     5041 ctcgggctgg atgcacagcg catccttcgt ccctccggca gcctcagtga tggcgaacgg
     5101 gtaaagggtg cgctggccag cgtgctgtat gccgatccgg caccccagct gttgctgctg
     5161 gacgagcccg gcaacgcgct ggacctgggc gcgttgcagg cgctggaaga cctgctggtc
     5221 gcgtggcccg gcgccctggt gatggtcagc catgaccggc acctgctgca ggccttgcgg
     5281 cccacgcagg tgctgcaggt gaccaccgac ggctggcagt ggcgcgacgc agtgtagagt
     5341 cgagccgtgc tcgactccgc catgcgtcca tccacgcatg gcgtatcgat ccgcggtagt
     5401 gccggccgct ggccggcaca tcacgaaccg tcaatgcgcg ctcaccgctt ccacaccggg
     5461 aacgcctgcg gcaattgctg ccacagcagc gggccggcac gcagctcctg atcgttcagc
     5521 aggcacgcgt ccagttccgc acgtaccgcg cgctcatcca tgtgcacacc gatcaccacc
     5581 agctcctggc ggcggtcgcc ccacagcggg tgccacaggc gctgcatcgc cgaatgcgcg
     5641 gccatgtccg ggaattcctc aaggcccggc agcggcgcac tccagcactc ggcctgctgc
     5701 cgcgcccagc cgaggtcact gtagggcagc ggcgtcggtg gcagcagcgg cgtggtgtct
     5761 tcctgcccgg cgcgcacgcg ctcgcgcgcc gcgtaccaga aacccgccgc ttgcgtgcgc
     5821 gttgccgcac ccacggtgtt caactcaccc acccagtcca tgcggttggc cagccagaac
     5881 cagcccttgc tgcggatcac gcccggcatg cccgactgca gcgcgcgtgc gaaccgcgcg
     5941 gggtggaacg gacgccgcga acggtagacg aaactggcga tgccgtattc ctcggtttcc
     6001 ggcgtgtgct cgccgcgcag ctccttcacc cagcccggtg cacgttgcgc acgctccatg
     6061 tcgaaacggc cggtgtccag cagttcgctc agcggcacat caccgaagct ggacaacaac
     6121 agcttggcat cgcggttcag cccgcgcagc accgccaggg tgtcctgcag tacttcgtcg
     6181 tccacctggt cgaccttgct gaccacgatc acatcggcga actccacctg ctcgcacagc
     6241 agatcgacca cgccgcggtc atcctccggt ccggcctgct ggccgcgctc ggccaggcgc
     6301 agggtcgagc cgaagtcagc caggaacgcg ctgccatcga ccaccgtcac catcgtgtcc
     6361 agccgcgcga tgtcactgag gctgaagccg tgctcgtcgc gcaccgcaaa ggtggcggcc
     6421 actggcatcg gctcgccgat gccagttgat tcgatcagca ggtagtcgta gcggccggca
     6481 tcggccaggc gcctcacttc ctgcagcagg tcatcgcgca gcgtgcagca gatgcagccg
     6541 ttgctgaact ccaccagcgt ctcttcggtg cggcgcagtt cggcgccacc ctcgcgcacc
     6601 agctgcgcat cgatgttgac ctcgctcatg tcgttgacga tgaccgccac gcgcaggccc
     6661 tcgcggttgc gcaggatctg gttgagcagg gtggtcttgc cggccccgag gaagccggac
     6721 agcacggtga ccggaaggcg acggtcggcg cgggaaacag tgttcatgtc ggagcgggtt
     6781 ggctgcggaa cggaaatgtt actgtataac aattgacgcg ctaggaacct cccccgatga
     6841 agtcgccctc tgccgccctg ctcgatgccg gcgcggtcgc cctgtccagc ctgtgcctgc
     6901 tgcactgctt ggcgctaccc ctgctcgcgg ccgcgctgcc gctgttcggc gcctgggccg
     6961 aagcggaatg ggtgcacctg ctgttcgtgg ccatcgccct gccgctgacc ggctatgcgc
     7021 tgtggcgggc cgagcgccgt cggccgctgc cggtactggc ctgggccacc gccggcatag
     7081 ggctgggcct gctgctggcc ggtgcgctgg cgctgccctc gcacggctgg gagacaccgc
     7141 tgaccgtcac cggcagcctg ctgctggccg caacgcatct gtggaacgcg cggcagcggc
     7201 acgggtagtg ccggccgctg gccggcaacc ccatgaactc cggacatacc cggtagtgcc
     7261 ggccgctggc cggcatcccc atgaac
//
LOCUS       DAOKIP010000194         7204 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.195,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000194 DAOKIP010000000
VERSION     DAOKIP010000194.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 7204)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7204)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7204
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.195"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            <1..5347
                     /locus_tag="QEL58_003314"
     CDS             <1..5347
                     /locus_tag="QEL58_003314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014647884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DNA repair ATPase"
                     /protein_id="HDS1677750.1"
                     /translation="QAVAQGGAYEVLRRRLGEQGQRLQALAEALNRQRLAEFGDSRLE
                     VVGRFRIRSENNCVGRDIVQVGPDRLLFGYNVYIGLKTHTRIEDVFGLYRLVQGKDGY
                     DVAALELKGSFLDQPGFVHDFNELYAYYKHARLLQLIVVGDKLLASFQIGERSSDVRV
                     FRWALSREGELTYLDARGERDIALPPPFDFEWTKATRDLAVNGRHSHLNILDTLFVET
                     TGGDLTIKVENNTETGQGIYSEPVEDSTQSLDDAQFEFARVGSLLLLKVLPYRETVWR
                     GLIYNTLTGEIVRNDAIVQACVQLPEDHGVIFPGGYYLQGGEHKAFDASMAGMQFKRS
                     IRSPNGEDVLYIFYEREGGRSALFVYNTIQRVLQNPVFGHGYAFMQDGRMVLFHAEGA
                     EPTRIHPMQVWQTPFSSDEFAASRPPGNTFMGRIGNAELVRGISNLFNLSREIDGQDV
                     SVQRYQRLVADTRRLFDTHHWLGDEACDGAEALLRQISATGESVLDEYEKVQSIREQS
                     AQAMVEAEANYKALLGRLQPQNWNEVQAFVEALNEITALRGRLLTIRELRYIDTARIE
                     AMTAELVQAQDRVGAATGEFLAGDAALAPLGSRLQALDEAAQQASSARQLDEQLDGMR
                     GMAADLDMLSELMAGLKVDDATARTRVVESISALYGRLNQARTRAEQRRRTLGSAEAV
                     AQFAAQFALFSQSITSALAMANDPEKADEQLSRLLVQLEELESQFGEHEQFLGDILSK
                     REELVEAFETHKQALLDDRQRKARSVLDAANRILDGLAKRTERFATADELNAFFAGDP
                     LILKLRELAERLHALRDNVKADDIEARLKGVRDQAVRQLRDRSDLYEAGGNVVRLGPR
                     HRFSVNTQALDLTLLPRGDTLAIHLTGTDFLETLHDPELEALKPFWPVTLDSESDAIY
                     RGEYLAGSLLLAAQDGRDGLDMAQLQHDLASPEALDQRVRAFAAPRYREGYERGIHDH
                     DAALILHALLPLQQAAGSLRHAPRVRALAMLFWAAEQRNEAVAQWPARQAGADAIARL
                     FGSDEGRQALRAEMAAALDAFVQAQALPFDAAAIEGAAAYLGDELSAGDPVFASSRHA
                     LALLEALQQQLEQAGQREALERALQRGQDPLPLRWALAGQWLRALGRLPAQAAHAGYT
                     DEAAALLLVQRQLRTRASDATLRVEVNGLLGEHPRIVQGTLALSLDDFLARLHAHLQQ
                     FVPAFHAYQAVRQGIIGRERQALRLSEFKARPLSSFVRNKLINDVYLGVIGDNLAKQM
                     GTVGENKRSDLMGLLMMISPPGYGKTTLMEYVAHRLGLVFMKINGPALGHDVRSLDPE
                     QAPDATSRQELEKLNLALEMGNNTMLYVDDIQHTHPEFLQKFISLCDGTRRIEGVWRG
                     RTRTYDMRGKKFCVVMAGNPYTESGEVFKIPDMLANRADIYNLGDVLGGMEAAFTLSY
                     IENSLTSNPVLAPLATRDMADLYLLVDRAMGKDVSTNGLSHAYSGAEINEITATLQRM
                     LRVRDVVYRVNQQYIASAAQDDRYRTEPPFRLQGSYRNMNKLAEKISPVMNEDELQQL
                     ISDHYLGEAQLLTTGAEENLLKLGELRGVLDEAQVQRWAQIKRDFLRNKAMGADDSDV
                     GGRVVAQLADIASALQLPPPAAPLVEADPAPWPALLEALQRLAEARPEAPAAVQPAEP
                     VVIAAPSPPATPLAEDLQAGLAPLVQLLVASQAQQEQVSQTLAAFAGWARQQVEGAAG
                     ASTTTARRPRVRRASTPEERALDEALMRHFYGESLPPEATDDAPSGSAPMRPPLP"
     gene            5344..6051
                     /locus_tag="QEL58_003315"
     CDS             5344..6051
                     /locus_tag="QEL58_003315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006381261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677751.1"
                     /translation="MTDAAPLPTPQRPDTADVARLADYGAPLLQALAARDVALPATAG
                     DGLVEALARIALALQAADPARLRRQESWWGRLLGRDVEREAAGRGLQSRLGVLALQAR
                     EQAQQLQQHMAVRATAISATGQAAEALQAWADAAAADVPAMQGAGQEALAARIDHLQR
                     LAALRRIEAGQWQLLQQQDEVLLQRFARIHDVLLPAWRQAALAAQAATGAVRAGQAAT
                     LHAQIDDEVAAAQARLR"
     gene            6096..>7204
                     /locus_tag="QEL58_003316"
     CDS             6096..>7204
                     /locus_tag="QEL58_003316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005417957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxic anion resistance protein"
                     /protein_id="HDS1677752.1"
                     /translation="MTQDSQHPGTLVPTPATPSALDEGALQALGLVREDLPRIAEIRM
                     ELDDLRPGNLQVFGREAATRTAAFSSQLLDQVRNRDLDASGDKLGEVVRIARSLKLDG
                     FAQRSKVPVIGGLIDRLRVSKGELVQKFSDTNAQIEQLLGDVGVQQALMGKRVGEFDR
                     MHEIVREERHALGLYAAAGKQRLAELQAEQLAGQGSDDPQQRIRQSEVDNAIRLIEKR
                     VSDLQLMQHAADQSLPMIRLIQANALQLIEKFNTVREITIPSWKRQFAIQLSLGEQKA
                     AVELSTAIDDATNELMRRNADLLRQASVDTARSNQRGVIDVATLRHVHEQLIATVEEV
                     RSIHREGMQQRQQAEVELSRLRDDLQQRLAAPTAL"
BASE COUNT         1221 a         2496 c         2473 g         1014 t
ORIGIN      
        1 ccaggccgtt gcccagggcg gtgcctacga agttctgcgc cgccgccttg gcgaacaggg
       61 ccagcgcctg caggcgttgg ccgaagccct caaccgccag cgactggccg agttcggcga
      121 cagccggctg gaggtggtcg gtcgcttccg catccgcagc gagaacaact gcgtcggccg
      181 tgacatcgtc caggtcgggc ctgaccgcct gctgttcggc tacaacgtct atatcgggct
      241 caagacccat acccgcatcg aggatgtgtt cggcctgtac cggctggtgc agggcaagga
      301 cggctacgat gtggccgcgc tggagctgaa gggcagcttc ctcgaccagc ccggcttcgt
      361 gcacgacttc aacgagctgt acgcctacta caagcatgcg cgcctgctgc agctgatcgt
      421 ggtcggcgac aagctgctgg cctcgttcca gatcggcgag cgcagcagcg acgtgcgcgt
      481 gttccgctgg gcgctgtcgc gcgaaggtga gctgacctac ctcgatgcgc gcggcgaacg
      541 cgatatcgcc ctgccgccgc cgttcgactt cgaatggacc aaggccaccc gcgatctcgc
      601 ggtcaacggc cgccactcgc acctgaacat cctcgacacc ctgttcgtgg aaaccaccgg
      661 tggcgacctg accatcaagg tcgagaacaa caccgaaacc gggcagggca tctacagcga
      721 accggtggag gacagcacgc agtcgctgga cgacgcccag ttcgaattcg cgcgcgtcgg
      781 ttcgctgctg ctgctgaagg tgttgccgta ccgcgagacc gtctggcgcg ggctgatcta
      841 caacacgctc accggcgaaa tcgtgcgcaa cgacgccatc gtccaggcct gcgtgcagct
      901 gcccgaagac cacggcgtga tcttccccgg cggttactac ctgcagggcg gcgagcacaa
      961 ggccttcgat gcctcgatgg ccggcatgca gttcaagcgc agcatccgct cgcccaacgg
     1021 cgaggacgtg ctctacatct tctacgagcg cgaaggcggg cgctcggcgc tgttcgtcta
     1081 caacaccatc cagcgcgtgc tgcagaaccc ggtgttcggc catggctatg ccttcatgca
     1141 ggatgggcgc atggtgctgt tccatgccga aggcgccgaa cccacccgca tccatccgat
     1201 gcaggtctgg cagacgcctt tcagcagcga cgagttcgcc gccagccggc cgcccggcaa
     1261 caccttcatg ggccgcatcg gcaatgccga gctggtgcgc ggcatctcca acctgttcaa
     1321 cctgtcccgc gagatcgacg gccaggatgt ctcggtgcag cgctaccagc gcctggtggc
     1381 cgatacccgc cgcctgttcg atacccacca ctggctgggg gacgaggcct gcgacggcgc
     1441 cgaagcgctg ctgcggcaga tcagcgccac cggcgagtcg gtgctggacg agtacgagaa
     1501 ggtccagtcc atccgcgagc agtcggcgca ggcgatggtc gaggcggaag cgaactacaa
     1561 ggcgctgctg ggccgcctgc agccgcagaa ctggaacgag gtgcaggcct tcgtcgaggc
     1621 cctgaacgag atcaccgcgc tgcgcgggcg gctgctgacc atccgcgagc tgcgctacat
     1681 cgacaccgcg cgcatcgagg cgatgaccgc cgaactggtg caggcgcagg atcgcgtggg
     1741 cgccgccacc ggcgagttcc tggccggcga tgcggcactg gcaccgctgg gcagccgcct
     1801 gcaggcactg gatgaagcgg cccagcaggc cagcagtgcg cgccagctgg atgagcagct
     1861 ggacggcatg cgtggcatgg ccgccgacct ggacatgctg tccgaactga tggccggcct
     1921 gaaggtggac gatgccaccg cgcgcacccg cgtggtcgaa tcgatttccg cgctgtacgg
     1981 gcggctgaac caggcgcgca cgcgtgccga acagcgccgc cgcacgctcg gctcggccga
     2041 ggccgtggcc cagttcgctg cacagttcgc gttgttctcg cagtccatca ccagtgcgct
     2101 ggcgatggcc aacgatccgg aaaaggccga cgaacagctg tcgcgcctgc tggtgcagct
     2161 ggaggaactg gaaagtcagt ttggcgagca cgagcagttc ctcggcgaca tcctcagcaa
     2221 gcgcgaggaa ctggtcgaag ccttcgagac gcacaagcag gcgttgctgg acgaccgcca
     2281 gcgcaaggcg cgctcggtgc tcgacgcggc caaccgcatc ctcgatggcc tggccaagcg
     2341 caccgagcgc ttcgccaccg ccgacgagct caacgcgttc ttcgccggcg acccgctgat
     2401 cctcaagctg cgcgaactgg ccgagcggct gcatgcgctg cgcgacaacg tcaaggccga
     2461 tgacatcgag gcgcgcctga agggcgtgcg cgaccaggcc gtgcgccagc tgcgcgaccg
     2521 cagcgacctg tacgaagccg gcggcaacgt cgtccggctc ggcccgcgcc accgtttcag
     2581 cgtgaacacc caggcgctgg acctgaccct gctgccgcgc ggcgacacgc tggccatcca
     2641 cctcaccggc accgatttcc tggaaaccct gcacgacccc gagctggagg cgctcaagcc
     2701 gttctggccg gtgaccctgg attcggaatc cgatgcgatc taccgcggcg agtacctggc
     2761 cggcagcctg ctgctggccg cgcaggacgg ccgcgatggc ctggacatgg cccagctgca
     2821 gcacgatctc gccagccccg aggcgctgga ccagcgcgtg cgtgcgttcg ccgcgccgcg
     2881 ctaccgcgag gggtatgagc gcggcatcca tgaccacgat gcggcgctga tcctgcacgc
     2941 cctgctgccg ctgcagcagg ccgccggcag cctgcgccat gcaccgcgtg tccgcgcact
     3001 ggccatgctg ttctgggccg ccgagcagcg caacgaggcc gtggcgcagt ggccggcgcg
     3061 ccaggccggt gccgatgcca tcgcccgcct ctttggttcc gacgaagggc gccaggcgct
     3121 gcgcgcggag atggccgctg cgctggatgc gttcgtgcag gcgcaggccc tgccgttcga
     3181 cgccgccgcg atcgaaggtg ccgctgccta cctcggtgac gaactgagcg cgggcgatcc
     3241 ggtattcgcc agcagccgcc atgcgctggc attgctggag gcattgcagc agcagctgga
     3301 gcaggcagga cagcgtgagg cactggaacg cgcgctgcag cgtggacagg atccgctgcc
     3361 gctgcgctgg gcgttggccg ggcagtggct gcgcgcgctg ggccggctgc cggcgcaggc
     3421 tgcccatgcc ggttacaccg atgaggctgc cgcactgctg ctggtgcagc ggcagctgcg
     3481 cacgcgcgcc agcgatgcca cgctgcgggt ggaagtgaac ggcctgctcg gcgagcatcc
     3541 gcgcatcgtg cagggcaccc tggcgctgtc gctggatgat ttcctggccc gcctgcacgc
     3601 ccacctgcag cagttcgtgc cggcattcca cgcctaccag gcggtacgcc agggcatcat
     3661 cggccgtgag cggcaggccc tgcgcctgtc cgagttcaag gcgcggccgc tgtcctcttt
     3721 cgtgcgcaac aagctcatca acgacgttta cctcggcgtg atcggcgaca acctcgccaa
     3781 gcagatgggc acggtgggcg agaacaagcg cagcgacctg atgggcctgc tgatgatgat
     3841 ctcgccgccg ggctacggta agaccacgct gatggaatac gtggcgcacc ggctgggcct
     3901 ggtcttcatg aagatcaacg gcccggcact gggccacgac gtgcgttcgc tggatccgga
     3961 gcaggcgccc gacgccacct cgcggcagga gctggaaaag ctcaatctgg ccttggagat
     4021 gggcaacaac accatgctgt atgtggatga catccagcac acccatcccg agttcctgca
     4081 gaagttcatt tcgctgtgcg atggcacccg ccgcatcgaa ggcgtgtggc gcggccgcac
     4141 gcgcacctac gacatgcgcg gcaagaagtt ctgcgtggtg atggccggca acccgtatac
     4201 cgagtcgggc gaggtgttca agattccgga catgctggcc aaccgcgctg acatctacaa
     4261 cctcggcgac gtgctgggcg gcatggaagc ggcgttcacc ctcagctaca tcgagaacag
     4321 cctgacctcc aacccggtgc tggcaccgct ggcgacccgt gacatggccg acctgtacct
     4381 gctggtcgat cgtgcgatgg gcaaggacgt gtcgaccaac gggctcagcc atgcctacag
     4441 cggtgccgag atcaacgaga tcaccgccac cctgcagcgc atgctgcgcg tgcgcgacgt
     4501 ggtctaccgg gtcaaccagc agtacatcgc cagcgctgcg caggatgacc gctaccgcac
     4561 cgagccgccg ttccgcctgc agggcagcta ccgcaacatg aacaagctgg ccgagaagat
     4621 ctcgccggtg atgaacgagg acgagctgca gcagctgatc tccgaccatt acctgggcga
     4681 ggcgcagctg ctgaccaccg gcgccgagga aaacctgctg aagctgggcg agctgcgcgg
     4741 cgtgctggac gaggcgcagg tgcagcgctg ggcgcagatc aagcgcgatt tcctgcgcaa
     4801 caaggccatg ggtgccgacg acagcgatgt cggtgggcgc gtggtcgcgc agctggccga
     4861 catcgccagt gcactgcagc tgccgccacc ggctgcgccg ctggtggagg ctgatccggc
     4921 accgtggccg gccttgctgg aagcgctgca gcgcttggcc gaagcacgcc cagaagcacc
     4981 ggccgccgtg cagcctgccg agccggtggt gattgccgcg cccagccccc cggccacgcc
     5041 gctggccgag gacctgcagg ccgggctcgc tccgctggtc caactgctgg tggcctcgca
     5101 ggcacagcag gaacaggtat cgcagaccct ggcggcgttc gccgggtggg cgcggcagca
     5161 ggtcgaaggc gcggccggtg ccagcaccac caccgcgcgt cgtccgcgcg tgcggcgggc
     5221 cagcacgccg gaggagcgcg cactggatga ggcgctgatg cgccacttct acggcgagtc
     5281 gctgccgccg gaagccactg acgacgcccc gtcgggaagc gcgccgatgc ggccgccgtt
     5341 gccatgaccg acgcggcgcc cctgccgacg ccgcaacggc cggacacggc ggatgttgca
     5401 cgcctggccg actacggcgc gccgctgctg caggcgttgg ccgcgcgcga cgtcgcgttg
     5461 ccggcgaccg ccggcgatgg gctggtcgag gcgctggcac gcatcgcgct ggcgctgcag
     5521 gctgccgacc cggcacgcct gcgccggcag gaaagctggt ggggccgcct gcttggccgc
     5581 gatgtcgagc gtgaggccgc aggccgcggc ctgcagtcgc ggctgggggt cctcgccctg
     5641 caggcacgcg agcaggccca gcagctgcag cagcacatgg ccgtgcgtgc caccgcgatc
     5701 agcgcgaccg gccaggccgc cgaagcactg caggcctggg cggacgcggc cgccgcggac
     5761 gtgccagcga tgcagggcgc cggccaggaa gcactggcgg cgcgcatcga ccacctgcag
     5821 cggctggcgg cgctgcgccg catcgaagcc gggcagtggc agctgctgca gcaacaggac
     5881 gaggtgctgc tgcagcgctt cgcccgcatc cacgatgtcc tgctgccagc gtggcggcag
     5941 gccgcactgg ccgcgcaggc cgccaccggc gcggtccgtg ccggccaggc ggccacgctg
     6001 cacgcacaga tcgacgacga ggtcgcggcg gctcaggcta gactgcgctg agccggccgc
     6061 cgctgccgcc aacccacctg caaggagact gcccgatgac ccaggacagc cagcaccccg
     6121 gcaccctcgt gcccaccccg gccacccctt ccgcactcga cgaaggcgcg ctgcaggcgt
     6181 tgggcctggt ccgcgaggac ctgccgcgca tcgccgagat ccgcatggaa ctggacgacc
     6241 tgcgcccggg caacctgcag gtgttcggcc gcgaggccgc gacgcgcacg gcagcgtttt
     6301 ccagccagct gctggaccag gtgcgcaacc gcgacctcga tgccagcggc gacaagctgg
     6361 gcgaagtggt gcgcatcgcg cgcagcctga aactggacgg tttcgcccag cgttcgaagg
     6421 tgccggtgat cggcggtctg atcgatcgcc tgcgcgtgtc caagggcgaa ctggtgcaga
     6481 agttcagcga taccaacgca cagatcgagc agctgctggg cgacgtgggc gtgcagcagg
     6541 cgctgatggg caagcgcgtg ggcgagttcg accgcatgca cgagatcgtg cgcgaggagc
     6601 gccacgcgct gggcctgtac gcagccgccg gcaagcagcg cctggccgaa ctgcaggccg
     6661 agcagctggc agggcagggc agcgacgacc cgcagcagcg catccgccag agcgaggtcg
     6721 acaatgcgat ccgcctgatc gaaaagcgcg tgtccgacct gcagctgatg cagcacgcgg
     6781 ccgaccagtc gctgccgatg atccgcctga tccaggccaa cgcgctgcag ctgatcgaaa
     6841 aattcaacac ggtgcgcgag atcaccatcc cgtcgtggaa gcgccagttc gccatccagc
     6901 tttcgctggg cgagcagaag gccgcggtcg agctgtccac cgccatcgac gatgccacca
     6961 acgagctgat gcgccgcaat gccgatctgc tgcgccaggc gtcggtggat accgcacgca
     7021 gcaaccagcg cggcgtgatc gacgtggcca cgctgcgcca tgtgcacgaa cagctgatcg
     7081 ccaccgtgga ggaagtgcgc agcatccatc gcgaaggcat gcagcagcgc cagcaggccg
     7141 aagtcgaact gtcgcgcctg cgcgacgacc tgcagcagcg gctggccgca cccacggcac
     7201 tgag
//
LOCUS       DAOKIP010000195         7165 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.196,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000195 DAOKIP010000000
VERSION     DAOKIP010000195.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 7165)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7165)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7165
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.196"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..939)
                     /gene="pip"
                     /locus_tag="QEL58_003317"
     CDS             complement(<1..939)
                     /gene="pip"
                     /locus_tag="QEL58_003317"
                     /EC_number="3.4.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017156969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl aminopeptidase"
                     /protein_id="HDS1677753.1"
                     /translation="MRTLYPAITPYDVGTLKVDDRHTLYFEQCGNPDGKPVVMLHGGP
                     GGGCSDKMRQFHDPSKYRIILFDQRGAGRSTPHADLVDNTTWDLVADIEKLREHLKVD
                     RWQVFGGSWGSTLALAYAETHPQRVTELVLRGIFMLRRWELEWFYQEGANRLFPDAWE
                     HYLKPIPAVERHDLISAFHRRLTSDDETTRLEAAKAWAVWEGATSFLHVDDDFINSHE
                     DPHFALAFARIENHYFVNGGFFEVEDQLLRDAHRIADIPGVIVHGRYDVVCPLANAWD
                     LTKVWPKAKLEITPASGHSAFEAENVDALVRATDGFA"
     gene            complement(988..1845)
                     /gene="prmC"
                     /locus_tag="QEL58_003318"
     CDS             complement(988..1845)
                     /gene="prmC"
                     /locus_tag="QEL58_003318"
                     /EC_number="2.1.1.297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014646005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor N(5)-glutamine
                     methyltransferase"
                     /protein_id="HDS1677754.1"
                     /translation="MSVKTEPSLRQVVAEASARLGGIEARHEAELLLLHVLERPRSWL
                     FAHATDPLPAAELATFETLLARRVAGEPVAYLTGRRGFWTLDLEVDPATLIPRPETEL
                     LVELALDRLPLGRPLQLADLGTGSGAIALALASERPQAQVLATDASVGALAVATRNAA
                     RHELHNVRFAEGGHDWYAPLQGARFDLIASNPPYIASDDPHLQQGDLRFEPATALASG
                     VDGLDDIRRIVDGGQAHLLPGGWLLIEHGWDQGESIRALFEAARFADVQTVQDLEQRD
                     RITLGRRPA"
     gene            2168..2731
                     /gene="ahpC"
                     /locus_tag="QEL58_003319"
     CDS             2168..2731
                     /gene="ahpC"
                     /locus_tag="QEL58_003319"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017114658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HDS1677755.1"
                     /translation="MSLINTQIQPFEANAYLNGEFIKVSDSTLKGQWSVLIFMPAAFT
                     FNCPTEIEDAADHYAEFKKAGAEVYIVTTDTHFSHKVWHETSPAVGKAQFPLVGDPTH
                     QLTNAFGVHIPEEGLALRGTFIINPEGVIKTLEIHSNEIARDVSETLRKLKAAQFTAA
                     NPNQVCPAKWKEGEKTLTPSLDLVGKI"
     gene            2957..4549
                     /gene="ahpF"
                     /locus_tag="QEL58_003320"
     CDS             2957..4549
                     /gene="ahpF"
                     /locus_tag="QEL58_003320"
                     /EC_number="1.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003488827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkyl hydroperoxide reductase subunit F"
                     /protein_id="HDS1677756.1"
                     /translation="MLDANLQSQLKTYLERVTRPIQITAHADDGAKSQEMLELLQTLE
                     SLSDKISLQVLRDGQGRVPSFDLGTPGQDIHLTFAGLPMGHEFTSLVLALLQVGGHPS
                     KATAELIEQVQNLEGDFKFETYFSLSCQNCPDVVQALNLAAVLNPRIQHVAIDGALFQ
                     DEVEKREIMSVPTVYLNGEVFDQGRMTLEQIVAKLDTNASKRDAEKIAAKDAFDVLVV
                     GGGPAGTAAAIYAARKGIRTGIAAERFGGQVLDTMAIENFISVKETEGPKLATALEQH
                     VREYDVDIMNLQRASALVPAGEDGLVQVQLENGAVLKSRSVILSTGARWRQMNVPGED
                     QYRNKGVAYCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVSHVTLLEFDSSLRAD
                     EVLQKKLRSLGNVTVLTSAQTTEVLGDGSRVTGLVYKDRVGGDAHRVELEGIFVQIGL
                     LPNTEWLKDTVALSPRGEIVIDDRGQTNLPGVFAAGDCTTVPYKQIIIAMGAGSTAAL
                     SAFDHLIRSSVSNSSGAVAEAA"
     gene            4635..5600
                     /locus_tag="QEL58_003321"
     CDS             4635..5600
                     /locus_tag="QEL58_003321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005415366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDS1677757.1"
                     /translation="MNLRDLKYLVALADHKHFGRAAASCFVSQPTLSTQIRKLEEELG
                     LPLVERAPRKVMLTPAGQEAAARARVIVSEVEQLKEAARRSRDPEAGTVRLGIFPTLG
                     PYLLPHVIPRIRERFPELELLLVEEKSDVLLDRLREGKLDAALLALPVIDDQLHAEFL
                     FEEPFLLAVSGRHPLARREHLDVQELATQKLLLLEDGHCLRDQALEVCRLFGANEKSE
                     FRATSLETLRQMVAADVGITLLPSLSVQPPVPRSNNIRLLDFTGEGRPSRRIAMIWRR
                     SSAMNGFLMELADQFKRLPHALFTLDAVNAVGDDANALPGPALNG"
     gene            5724..6128
                     /gene="rnk"
                     /locus_tag="QEL58_003322"
     CDS             5724..6128
                     /gene="rnk"
                     /locus_tag="QEL58_003322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005415365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside diphosphate kinase regulator"
                     /protein_id="HDS1677758.1"
                     /translation="MNTASGLPPSITVSTFDMDRLEAMLDSPALSQTPAALALAEELN
                     RATVLAPDQIPEGIVMMHSRVECEDEVSGEKHVLTLVFPREANVDEGKVSVLAPVGSA
                     LLGLAIGQSIDWNAPGGRKLRLRVTAVHNDRP"
     gene            6179..7135
                     /locus_tag="QEL58_003323"
     CDS             6179..7135
                     /locus_tag="QEL58_003323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012479209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transaldolase"
                     /protein_id="HDS1677759.1"
                     /translation="MSTPSKLSQLRELSVVVADTGDYDAIKRLQPVDCTTNPTLVKKA
                     LDLPVYAELIERELAWGRQQSGDREAVVHAVADRLTIGVGALLSTLVPGRVSTEVDAD
                     QAHDTTATVAKARQFIQMYADAGVPREKILIKIAATWEGVEAARILQAEGIDCNLTLI
                     FNPTQALACSEAGAFLISPFVGRILDWYVANGQTPASIDEDPGVKFVRGVYAEFKRRG
                     SPTVVMGASFRSTAQIEALAGCDRLTISPDLLEKLDADHGELPRKLVAGAADGAAVTP
                     IDAAKFAADLAADPMATEKLATGIDAFAKDLQALRERIRSEL"
BASE COUNT         1247 a         2415 c         2336 g         1167 t
ORIGIN      
        1 ggcaaaacca tcggtggcgc gcaccagcgc gtccacattc tccgcttcga acgccgagtg
       61 gcccgaggcc ggggtgattt ccagcttcgc cttcggccag accttggtca ggtcccaggc
      121 attggccagc gggcagacca cgtcgtagcg gccgtgcacg atcacgcccg ggatatcggc
      181 gatgcggtgc gcgtcgcgca gcagctggtc ttccacctcg aagaagccgc cgttgacgaa
      241 gtagtggttc tcgatgcggg cgaaggccag cgcgaaatgc gggtcttcgt ggctgttgat
      301 gaagtcatca tcgacatgca ggaagctggt cgcgccttcc cacaccgccc acgccttggc
      361 ggcttccagg cgggtggttt cgtcgtcgct ggtcaggcgg cggtggaagg ccgagatcag
      421 gtcgtggcgc tcgacggccg gaatcggctt caggtaatgc tcccacgcat ccgggaacag
      481 gcggttggcg ccttcctggt agaaccattc cagctcccag cggcgcagca tgaagatgcc
      541 gcgcagcacc agttcggtca cacgctgcgg gtgggtttcg gcgtaggcca gggccagggt
      601 cgagccccag ctgccaccga acacctgcca gcgatcgacc ttcaggtgct cgcgcagttt
      661 ttcgatatcg gcaaccaggt cccaggtggt gttgtccacc agatcggcgt gtggggtgga
      721 acggccggcg ccgcgctggt cgaacaggat gatgcggtac ttggacgggt cgtggaactg
      781 gcgcatcttg tcgctgcagc cgccgcccgg accaccgtgc agcatcacca ccggcttgcc
      841 gtccgggttg ccgcactgtt cgaagtacag cgtgtggcgg tcgtcgacct tcagggtgcc
      901 gacgtcgtaa ggggtgatgg cggggtacag cgtacgcatg cttgcagctc cagggtgatg
      961 ccctgccggg gcaggagaac ccccattcta ggccggtcgc cggccgaggg tgatgcggtc
     1021 gcgctgctcc aggtcctgca cggtctgcac gtcggcgaaa cgcgccgcct cgaacagcgc
     1081 gcggatcgat tcgccctggt cccacccgtg ttcgatcagc agccagcccc cgggcagcag
     1141 gtgcgcctgg ccaccgtcga cgatgcggcg gatgtcatcc aggccatcca cgccggaggc
     1201 cagcgcggta gccggttcga agcgcaggtc gccctgctgc agatgcggat cgtcgctggc
     1261 gatgtacggc gggttgctgg cgatcagatc gaagcgcgcg ccctgcagcg gcgcgtacca
     1321 gtcatgcccg ccctcggcga agcgcacgtt gtgcagttca tggcgcgcgg cgttgcgcgt
     1381 ggctacggcc agcgcaccca cgctggcatc ggtggccagt acctgcgcct gcggccgttc
     1441 gctggccagc gccagcgcga tcgcgccgct gccggtaccg aggtcggcca gctgcagcgg
     1501 gcggcccagt ggaaggcgat ccagtgccag ttccaccagc agttcggttt ccgggcgcgg
     1561 aatcagcgtg gccgggtcga cctccaggtc cagcgtccag aaaccgcggc gaccggtcag
     1621 gtaggccaca ggctcgccgg ccacgcgacg cgccagcagc gtttcgaagg tggcgagttc
     1681 agcggcgggc agcgggtcgg tagcgtgtgc gaacagccag ctgcgcgggc gctccagcac
     1741 gtgcagcagc agcagttcgg cctcgtggcg ggcctcgatg ccgcccaggc gggcactggc
     1801 ctcggccacg acctggcgca gggagggttc ggttttgacg gacatgccgc aattgtagag
     1861 tcgagcttgc tcgactgctc cctgcccatg gtcgagcagg ctcgacgcta caaaaggcgg
     1921 gaatccgttc aggttctggc ggacgggata aggaagggct atcggccgtc ttcaccctcc
     1981 agggaagatt ttccttgtca cacaggcagt tgcaggatgg aggcagccgg attcagtgcc
     2041 tgctcagtgc atcttgatag actcaatcta tcaaatagat gcaatcaatg gattgttctt
     2101 atcgccagcg agtcggtaac ctagctcctg tcgattcacc cactcccctt cacccagagg
     2161 aataacgatg tccctgatca acacccagat ccagccgttc gaagccaatg cttacctgaa
     2221 tggcgagttc atcaaggttt ccgacagcac cctgaagggc cagtggtcgg tcctgatctt
     2281 catgccggcc gccttcacct tcaactgccc gaccgagatc gaagacgccg ctgaccatta
     2341 cgccgagttc aagaaggccg gcgccgaggt ctacatcgtc accaccgaca cccacttctc
     2401 gcacaaggtg tggcacgaaa cctcgccggc cgtcggcaag gcccagttcc cgctggtcgg
     2461 cgacccgacc caccagctga ccaacgcctt cggcgtgcac attccggaag aaggcctggc
     2521 cctgcgcggc accttcatca tcaacccgga aggcgtgatc aagaccctgg agatccactc
     2581 caacgagatc gcccgtgacg tctccgagac cctgcgcaag ctgaaggctg cccagttcac
     2641 cgccgccaac ccgaaccagg tgtgcccggc caagtggaag gaaggcgaga agaccctgac
     2701 cccgtcgctg gacctggtcg gcaagatcta aggcagtacc ggcctgccgt ggccccacgc
     2761 cacggcgcgc ccttcatccc cgtgccggtc cccccgccgg cgtgggggtg aacccaagac
     2821 agccaatgct cgcccgcctt ggccagccag ccccttccac ggtcgctgtc ttgggttcac
     2881 ccctaccccc tgctggtccg ctaccttcta cagcggtgcc acgccccctg tttgcctgaa
     2941 gccaggagat gacccgatgt tggacgccaa cctgcagtcg cagctgaaga cctatctgga
     3001 gcgcgtgacc cgcccgatcc agatcaccgc gcacgccgac gacggcgcca agtcgcagga
     3061 gatgctggaa ctgctgcaga ccctggaaag cctgtcggac aagatctcgc tgcaggtgct
     3121 gcgcgacggc cagggacgcg tgccgtcctt cgacctgggc accccgggcc aggacatcca
     3181 cctgaccttc gccggcctgc cgatgggcca cgagttcacc tcgctggtgc tggcgctgct
     3241 gcaggtcggc ggccacccgt ccaaggccac cgccgagctg atcgagcagg tgcagaacct
     3301 ggagggcgac ttcaagttcg aaacctactt ctcgctgtcc tgccagaact gcccggacgt
     3361 ggtgcaggcg ctgaacctgg ccgccgtgct caacccgcgc atccagcacg tggccatcga
     3421 tggcgccctg ttccaggacg aagtcgagaa gcgcgagatc atgtcggtgc cgacggtgta
     3481 cctcaacggt gaagtgttcg accaaggccg catgaccctg gagcagatcg tcgccaagct
     3541 ggacaccaat gccagcaagc gcgatgccga gaaaatcgcc gccaaggatg ccttcgacgt
     3601 gctggtggtc ggtggtggcc cggccggcac cgctgcggcg atctacgccg cgcgcaaggg
     3661 catccgcacc ggtatcgccg ccgagcgttt cggtggccag gtgctggaca ccatggcgat
     3721 cgagaacttc atctcggtga aggagaccga aggcccgaag ctggccacgg cgctggaaca
     3781 gcacgtgcgc gagtacgacg tggacatcat gaacctgcag cgtgccagcg ctctggtgcc
     3841 ggccggcgaa gacggcctgg tgcaggtgca gctggagaac ggcgcggtgc tgaagtcgcg
     3901 ttcggtgatc ctgtccaccg gcgcgcgctg gcggcagatg aacgtgccgg gcgaagacca
     3961 gtaccgcaac aagggcgtgg cctactgccc gcattgcgat ggcccgttgt tcaagggcaa
     4021 gcgcgtggcg gtgattggcg gcggcaactc cggcgtcgag gcggccatcg atctggccgg
     4081 catcgtgtcg catgtaaccc tgctggaatt cgattccagc ctgcgcgccg atgaagtgct
     4141 gcagaagaag ctgcgcagcc tgggcaacgt gaccgtgctg accagcgcgc agaccaccga
     4201 agtgctgggc gacggcagcc gggtcaccgg cctggtctac aaggaccgcg tcggcggcga
     4261 tgcccaccgc gtcgagctgg aaggcatctt cgtgcagatc ggcctgctgc ccaacaccga
     4321 atggctgaag gacaccgtgg cactttcgcc gcgcggcgag atcgtcatcg atgaccgtgg
     4381 ccaaaccaac ctgccgggcg tgttcgccgc aggcgattgc accacggtac cctacaagca
     4441 gatcatcatc gccatgggcg ctggctcgac cgccgcactg agcgcgttcg atcacctgat
     4501 ccgctcgtcg gtgagcaaca gcagcggtgc cgttgctgaa gcggcctgat ccaccgttcc
     4561 cagatcaccg ggaacattgt ctgcctgtcg ggtaaccatg ccgtcagccg gtccgttacc
     4621 cctggggtgt aaggatgaac ctacgtgatc tgaagtacct ggtagccctg gccgaccaca
     4681 agcatttcgg ccgggctgcc gcctcctgct tcgtcagcca gcccacgctg tcgacgcaga
     4741 tccgcaagct ggaagaagag ctgggcctgc cgctggtgga acgcgcgccg cgcaaggtga
     4801 tgctgacccc ggccgggcag gaagccgccg cgcgggcacg ggtgatcgtg tccgaagtgg
     4861 agcaactgaa ggaagcggcg cgacgcagcc gcgatccgga agccggtacg gtgcgcctgg
     4921 ggatcttccc gaccctgggc ccgtacctgc tgccgcatgt gatcccccgc atccgcgaac
     4981 gcttcccgga gctggagttg ctgctcgtcg aggaaaagag cgacgtgctg ctggaccgtc
     5041 tgcgcgaagg caagctcgat gccgcgctgc tggcgctgcc ggtgatcgac gaccagctgc
     5101 atgccgagtt cctgttcgag gagccgttcc tgctggccgt gtccgggcgc catccgctgg
     5161 cccgccgcga acacctggac gtgcaggagc tggccacgca gaagctgctg ctgctggaag
     5221 acggccattg cctgcgcgac caggcgctgg aagtgtgccg cctgttcggc gccaacgaga
     5281 agtccgagtt ccgcgccacc agcctggaaa ccctgcggca gatggtcgcc gccgacgtcg
     5341 gcattaccct gcttcccagc ctgtcggtgc agccgccggt gccgcgctcg aacaacatcc
     5401 gcctgctcga cttcaccggc gaaggtcgtc cgagccgccg catcgccatg atctggcgcc
     5461 gcagctcggc gatgaatggc ttcctgatgg agctggccga ccagttcaag cggctgccgc
     5521 atgcactgtt cacgctcgac gcggtgaatg ccgtcggcga cgacgccaat gccctgcccg
     5581 gccccgcgct gaacggctga gcccccacag cctcggcccg gaatcggcag gagtcgattc
     5641 cggtcgcatt tgtccccaca atacagacag gcggcgccag cgggtgccgc cttttgcatg
     5701 gttttcaacc aaggagcgcc accatgaaca ccgccagcgg cctgccgccg tcgatcactg
     5761 tttccacctt cgacatggac cgcctggagg ccatgctcga ctctcctgcg ctgagccaga
     5821 cgcctgccgc gctcgcgctt gctgaagaac tcaaccgggc caccgtgctg gcgccggacc
     5881 agattcccga aggcatcgtc atgatgcatt cgcgcgtgga gtgcgaagat gaagtgtcgg
     5941 gcgaaaaaca cgtcctgacc ctggtcttcc cccgcgaagc caacgtcgat gaaggcaagg
     6001 tttccgtgct ggccccggtc ggcagtgccc tgctcggcct ggccatcggc cagagcatcg
     6061 actggaatgc gcccggcggc cgcaagctgc gcctgcgcgt gaccgcggtc cacaacgacc
     6121 gcccctgatt accgctgcgc accgcgcgcg attcgatccc cctgcaccag gagccgtaat
     6181 gagtaccccg tccaaactgt cccagctgcg cgaactgtcc gtggtcgttg ccgataccgg
     6241 tgactacgac gcgatcaagc gcctgcagcc ggtggattgc accaccaacc cgaccctggt
     6301 gaagaaggcg ctggacctgc cggtctacgc cgaactgatc gaacgcgaac tggcctgggg
     6361 ccgccagcag agcggtgacc gcgaagccgt ggtgcacgcc gtggccgacc gcctgaccat
     6421 cggcgtcggc gcgctgctga gcacgctggt gccgggccgc gtgtcaaccg aagtggacgc
     6481 cgaccaggcc cacgacacca ccgcgaccgt ggccaaggcc cgccagttca tccagatgta
     6541 cgccgatgcc ggcgtgccgc gcgagaagat cctgatcaag atcgctgcga cctgggaagg
     6601 cgtggaagcc gcgcgcatcc tgcaggccga gggcatcgac tgcaacctga ccctgatctt
     6661 caacccgacc caggcgctgg cctgcagcga agccggcgca ttcctgatct cgccgttcgt
     6721 cggtcgcatc ctggactggt acgtggccaa tggccagacc ccggccagca tcgacgaaga
     6781 cccgggcgtg aagttcgtgc gcggcgtgta tgccgagttc aagcgccgcg gttcgccgac
     6841 ggtggtgatg ggcgcctcgt tccgttcgac cgcgcagatc gaagcgctgg ccggctgcga
     6901 ccgcctgacc atttcgccgg acctgctgga gaagctggac gccgaccatg gcgagctgcc
     6961 gcgcaagctg gtggccggtg ccgccgacgg cgcagcggtg accccgatcg acgcagcgaa
     7021 gttcgccgcc gacctggccg ccgatccgat ggcgaccgag aagctggcga ccggtatcga
     7081 tgcgtttgcc aaggatctgc aggcgctgcg cgagcggatt cgttcggaac tgtgaggatt
     7141 tcggccaacg gctgagcccc tcgtg
//
LOCUS       DAOKIP010000196         7085 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.197,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000196 DAOKIP010000000
VERSION     DAOKIP010000196.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 7085)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7085)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7085
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.197"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..299)
                     /locus_tag="QEL58_003324"
     CDS             complement(<1..299)
                     /locus_tag="QEL58_003324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011408424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2388 domain-containing protein"
                     /protein_id="HDS1677760.1"
                     /translation="MTRPLVLLALLSLPLAGFASSFAGTSAGSATGASSGSSASSSGD
                     DKVVQAARDDAAAFVASDGQIRGARLQAALVHLREQDAAAQQQSDLQLARALLAR"
     gene            complement(362..1750)
                     /locus_tag="QEL58_003325"
     CDS             complement(362..1750)
                     /locus_tag="QEL58_003325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019300000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HDS1677761.1"
                     /translation="MTDSRIASLQQACPGLKLKTDPADLEHYGRDWTRRWTPAPLAIA
                     LPATVEEVQAVMRWSAAEGVPVVPSGGRTGLSGGAVAANGELVLSLERMNKALAYDAV
                     DRTLVVQAGMPLEAVHNAALDHGLIYPVDFAARGSCSIGGNIATNAGGIRVIRYGNTR
                     EWIAGLKVVTASGELLELNKGLIKNSSGYDFRQLLIGSEGTLGVIVEATVKLTDPPPA
                     SNVMLLAVPSFEVLMQVFAAFRARLQLQAFEFFTERALEHVLAHGAQAPFDEVHPYYV
                     VTEFAANDDAQEAAAMAAFEDCMGNGWVSDGVISASDAQAAQLWRLREGITESLARYK
                     PYKNDVSVRISSMPAFLAETQALIGQAYPHFDVVWFGHIGDGNLHINVLKPDDTPDAD
                     FVSQCEHVTKLLAQVLARFDGSISAEHGIGLVKKGYLDSTRGPAEIALMKAVKRAFDP
                     QARLNPGKLFDV"
     gene            1920..3161
                     /gene="serA"
                     /locus_tag="QEL58_003326"
     CDS             1920..3161
                     /gene="serA"
                     /locus_tag="QEL58_003326"
                     /EC_number="1.1.1.95"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005915394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate dehydrogenase"
                     /protein_id="HDS1677762.1"
                     /translation="MSPKKTSFPKQDIRVLLLEGVSQTAVEVFSAAGYSQIEAHTKAL
                     PEDELKARIAEAHIVGIRSRTQLSAEVLAEAKRLIAVGCFCIGTNQVDLDAAELAGIP
                     VFNAPYSNTRSVAELVIAEAIMLTRGIPQKNAECHRGGWSKSASGSHEVRGKTLGIIG
                     YGHIGTQVGVLAESLGMQVIFHDVETKLALGNARAAASLDDLLARADIVTLHVPETPS
                     TQWMIGSTELAKMRKGAHLINAARGTVVDIDALDAALASGHVGGAALDVFPVEPKGNG
                     DIFESPLTRHDNVILTPHVGGSTLEAQDNIGVEVAAKLVRYSDNGSTLSAVNFPEVTL
                     PEHADSLRLLHIHQNVPGVLSKVNEIFSRHNVNIDGQFLRTDPKVGYVVIDITAGEEQ
                     AAAVRDELAAIPGTLRTRILY"
     gene            complement(3232..3846)
                     /locus_tag="QEL58_003327"
     CDS             complement(3232..3846)
                     /locus_tag="QEL58_003327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014646973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HDS1677763.1"
                     /translation="MNGDNEQYFSRRRPFMSQTAETLAVLDDRLRDLLQDYARREPAH
                     DALAAEFGTLLDDPEDPFRRERLAGHFTASCWLVSADGQRLLLTHHRKLQRWLQLGGH
                     ADGDRDLTRVALKEAEEESGLGGLVLEDPAIFDLDKHWIPERKDVPGHWHYDVRFVIR
                     ALGGEAFVLSEESLELAWRPVTEVAADPQSDESMQRMAHRWLAR"
     gene            3980..5455
                     /locus_tag="QEL58_003328"
     CDS             3980..5455
                     /locus_tag="QEL58_003328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HDS1677764.1"
                     /translation="MLKALLRVKPVQPAGHVDAGEPIEGSLDGEATLKRTLTAKHLIL
                     LGVGAVIGAGIFVLTGQAAANHAGPAVMLSFVIAGFACALAGLCYAEFAAMMPVSGSA
                     YSYSYATLGEGMAWFIGWCLVLEYLFASASVAVGWSAYLISFITTTLHMPFPDLLSAA
                     PIAWTGSEFVSSGKLFNLPAVLIVAAVSGLLYVGVTQSAFVNAIIVAIKVTVICLFIG
                     IGAAHIDPANWQPFIPENTGVPGEFGWSGVFRAATIVFFAYIGFDAVSTAAGETKDPQ
                     RNMPIGLLGSLAVCTIVYIIVCAVLTGMMPYHLLGTDKPVATALEPYPTLSWLKTLVE
                     IGAIAGLSSVVLVMMMGQTRIAYTISRDGLLPKFFGKVHARFRTPYVATIVVGVIAAA
                     LAGLVPLNVLGELVSMGTLLAFATVCIGVLVLRYTKPEIHRPFRVPMVWIICPLGAAT
                     CLFLFWQAFVVHWHLFVGWTLLGLLIYLGYGIRNSKLAKSP"
     gene            5538..6965
                     /locus_tag="QEL58_003329"
     CDS             5538..6965
                     /locus_tag="QEL58_003329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003486240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HDS1677765.1"
                     /translation="MFKQLWATKHPHAAHEDANGLSLRRHLGPWGLTALGIGAVIGGG
                     IFVITGQAAANHAGPAIMLSFVLAAICCAFCALAYAEFASMVPVSGSAYTYTYATFGE
                     LSAWFIGWMLVLEYGVSASAVAVSWTGYFLSLLSQFDIHLPAALVSAPLDAQLRPTGA
                     IANLPAAALVLLLTWLCYVGISKSSAMNMAMVVLKTGLIVLVIVVGWKYVDTSNWTPF
                     IPANEGPGKYGMEGVLRGAAMVFFAYIGFEAVSVAAQESKNPQRDMPIGMMLSLAVCT
                     VLYIAMAAVMTGLVPYQLLGTDEPVVTAVAAHPQLGWLRWVVEVGALVGLSSVVLVMI
                     IGQPRIFMIMGRDGLLPPVFTKIHPKYRTPHINTVITGIGIALLAALFPLDILGELTS
                     MGTLIAFAAVCAGVLILRRTQPDLPRPFRMPMAWLICSLGVLSCLALLSAMTMHNWML
                     MGVWTFVGFVIYFCYGFKHSRLRGK"
BASE COUNT         1118 a         2419 c         2315 g         1233 t
ORIGIN      
        1 cagcgtgcca gcagcgcgcg ggccagctgc aggtcgctct gctgctgggc agcggcatcc
       61 tgctcgcgca ggtggaccag tgcggcctgc aggcgtgcgc cgcggatctg gccgtcgctg
      121 gcgacgaacg cagcggcatc atcgcgtgcg gcctgtacca ccttgtcgtc gcccgagctg
      181 ctggccgagg aaccggagga agcaccggtg gccgagccgg ccgaggtgcc tgcgaagctg
      241 gaagcgaagc cggccagcgg cagggacagc agggcaagca gaacaagcgg acgggtcatc
      301 gattcgaagc cggttgtggg aatgcgtgga gcgtaacggg tacgtgaagg atttgcccgg
      361 ctcagacgtc gaacagcttg ccgggattca gccgcgcttg gggatcgaac gcgcgtttga
      421 ctgccttcat cagcgcgatc tcggccgggc cgcgggtgct gtccaggtag cccttcttga
      481 ccaggccgat gccgtgctcg gcggaaatgc tgccatcgaa acgggccagc acctgggcca
      541 gcagcttggt cacgtgctcg cactgcgaca cgaaatcggc gtcaggggtg tcgtccggct
      601 tgagcacatt gatatgcagg ttgccgtcac cgatgtggcc gaaccagacc acgtcgaaat
      661 gcggataggc ctgcccgatc agcgcctggg tctcggccag gaacgccggc atcgacgaga
      721 tccgcaccga gacatcgttc ttgtacggtt tgtagcgtgc aagcgactcg gtgatgccct
      781 cgcgcaggcg ccacagctgg gcggcctggg cgtcacttgc actgatcacg ccatcgctga
      841 cccagccgtt gcccatgcag tcctcgaacg ccgccatcgc cgccgcttcc tgcgcgtcgt
      901 cgttggccgc gaactcggtg accacgtaat aagggtgcac ctcgtcgaac ggcgcctgcg
      961 caccatgcgc cagcacgtgc tccagcgccc gctcggtgaa gaactcgaag gcctgcagct
     1021 gcaggcgcgc gcggaacgcg gcgaacacct gcatcagcac ctcgaagctg gggacggcca
     1081 gcagcatcac attgctggcc ggcggcgggt cggtcagctt caccgtcgcc tcgacgatca
     1141 cccccagcgt accttccgag ccgatcagca gctggcggaa gtcatagccg ctggagttct
     1201 tgatcaggcc cttgttgagt tcgagcagct cgccgctggc ggtgaccact ttcagcccgg
     1261 cgatccattc tcgggtattg ccgtaacgga tcacgcggat gccgccggca ttggtggcga
     1321 tgttgccgcc gatcgagcag gaaccgcgcg ccgcgaaatc gaccgggtag atcaggccgt
     1381 ggtcgagcgc ggcgttgtgc accgcctcca gcggcatgcc ggcctgcacc accagcgtgc
     1441 gatcgaccgc gtcgtaggcc agcgccttgt tcatccgctc caggctgagc accagttcgc
     1501 cgttggccgc caccgcgcca ccggacaggc cggtgcgtcc acccgacggc accaccggca
     1561 cgccctcggc cgcgctccag cgcatcaccg cctgcacctc ttcaaccgtg gccggcaatg
     1621 caatcgccag cggcgccggc gtccagcgcc gggtccagtc gcgcccgtaa tgctccaggt
     1681 cggccggatc ggtcttcagt ttcaggccgg gacaggcctg ctgcagcgag gcaatgcggg
     1741 aatcggtcat gacggtccag cgcggtgcgt gaagaacggg caagcgtgcc agtggcgcgc
     1801 gccagcgtcc agccccgcac ccgtgcagat agctacggat gcaaccaatt gcgcactgca
     1861 ccatggccgg tgcgatctgg catagtggtc agcccctgtc ccactggccg tgttgcccca
     1921 tgtcgccgaa gaagacctcg ttcccgaagc aggatatccg cgtgctgttg ctggaggggg
     1981 tcagccagac cgccgtggag gtgttcagcg ccgccggcta cagccagatc gaagcgcaca
     2041 ccaaggcgct gcccgaggac gaactgaagg cgcgcatcgc cgaggcgcac atcgtcggca
     2101 tccgctcgcg tacccagctc agcgccgagg tgctggccga ggccaagcgg ctgatcgcag
     2161 tgggctgctt ctgcatcggc accaaccagg tcgacctgga cgcggccgag ctggccggca
     2221 tcccggtatt caacgccccc tattccaaca cccgcagcgt ggccgagctg gtgatcgccg
     2281 aggcgatcat gctgacccgc ggcatcccgc agaagaacgc cgagtgccat cgcggcggct
     2341 ggtcgaagtc ggccagcggc agccatgaag tgcgtggcaa gacgctgggc atcatcggct
     2401 acggccacat cggcacccag gtcggcgtac tggccgaatc gctgggcatg caggtgatct
     2461 tccacgacgt ggaaaccaag ctggcgctgg gcaatgcccg ggccgcggcc agcctggacg
     2521 atctgctcgc ccgcgccgac atcgtcaccc tgcacgtgcc ggaaaccccg tccacgcaat
     2581 ggatgatcgg cagcaccgag ctggcgaaga tgcgcaaggg cgcgcacctg atcaacgccg
     2641 cgcgcggcac cgtggtcgac atcgatgcgc tggacgcggc gctggccagc ggccacgtcg
     2701 gtggcgccgc gctggacgtg ttcccggtcg agccgaaggg caatggcgat atcttcgaat
     2761 cgccgctgac ccgccacgac aacgtgatcc tgacgccgca cgtgggtggc agcacgctgg
     2821 aagcgcagga caacatcggc gtggaagtgg ccgccaaact ggtgcgctac agcgacaacg
     2881 gcagcaccct gtcggcggtc aatttcccgg aagtgaccct gcccgagcac gccgacagcc
     2941 tgcgcctgct gcacatccac cagaacgtgc cgggcgtgct gtccaaggtc aacgagatct
     3001 tctcgcgcca caacgtcaac atcgacggcc agttcctgcg caccgacccg aaggtgggct
     3061 acgtggtgat cgacatcacc gccggcgagg aacaggccgc cgcggtgcgc gacgagctgg
     3121 ccgcgatccc cggcacgctg cgcacgcgca tcctgtactg aaaaaagggg acggagggga
     3181 ttaagtcgtt gatgccacaa acgacttaat cccctccgtc ccctttttat ctcaacgtgc
     3241 cagccacctg tgtgccatgc gctgcatgga ttcatcggac tgcgggtcgg ccgcgacttc
     3301 ggtcaccggc cgccaggcca gctccagcga ttcctcgctg agcacgaagg cttcgccacc
     3361 cagcgcacgg atcacgaaac gcacgtcgta gtgccagtgc cccggcacgt ccttgcgctc
     3421 tggaatccag tgcttgtcca gatcgaagat ggccgggtct tccagcacca ggccgcccag
     3481 gcctgattct tcctcggctt ccttcagcgc cacccgggtc aggtcgcggt cgccgtcggc
     3541 gtggccgccc agctgcagcc agcgctgcag cttgcggtgg tgggtcagca gcaggcgctg
     3601 gccgtcggca ctgaccagcc agcagctggc ggtgaagtgg ccggccagcc gttcgcgccg
     3661 gaatggatct tccggatcgt ccaacaatgt gccgaattcg gcggccaatg cgtcgtgggc
     3721 cggctcgcga cgggcatagt cctgcagcag gtcgcgcaag cgatcgtcaa gcacggcaag
     3781 ggtttcggcg gtctggctca tgaatgggcg gcgtctggaa aaatactgct cattatcgcc
     3841 gttcattgtt gcgattgcgc ttgtgcgttg gcttcagctt tggctaaggt acagcgggcc
     3901 gttcgcgcgg ccttcaccat tccagggttg ccggcaacgt atcggcggcc cacccaatcc
     3961 gatcactagg aagtactgca tgctgaaagc tctgttgagg gtcaagccgg tccaaccggc
     4021 cgggcacgtc gatgccggcg aacccatcga aggcagcctg gacggcgaag ccacgttgaa
     4081 acggaccctc acggctaaac acctcatcct gcttggcgtg ggtgcggtga tcggcgcagg
     4141 tatcttcgtc ctgaccggcc aggccgcggc caaccacgcc ggccccgccg tcatgctgtc
     4201 gttcgtgatc gccggttttg cctgcgcgct ggcgggcctg tgctacgccg agttcgcggc
     4261 gatgatgccg gtctccggca gcgcctattc ctactcctac gccaccctcg gcgaaggcat
     4321 ggcctggttc atcggctggt gcctggtgct ggagtacctg ttcgcctcgg cctcggtcgc
     4381 ggtgggctgg tcggcgtacc tgatcagctt catcaccact acgctgcaca tgccgttccc
     4441 ggacctgctc agcgccgcgc ccatcgcctg gaccggcagc gagttcgtct cctccggcaa
     4501 gctgttcaac ctgccggcgg tgctgatcgt ggcggcggtg tccggcctgc tgtacgtggg
     4561 cgtgacccag tcggcgttcg tcaacgcgat catcgtggcg atcaaggtca ccgtcatctg
     4621 cctgttcatc ggcatcggtg cagcccacat cgacccggcc aactggcagc cgttcatccc
     4681 ggaaaacacc ggcgtgccgg gtgagttcgg ctggagcggc gtgttccgcg cggccaccat
     4741 cgtgttcttc gcctacatcg gcttcgatgc ggtttccacc gccgccggcg agaccaagga
     4801 cccgcagcgc aacatgccga tcggcctgct cggctcgctg gcggtgtgca ccatcgtcta
     4861 catcatcgtc tgcgcggtgc tgaccggcat gatgccgtac cacctgctgg gcaccgacaa
     4921 gccggtggcc accgcgctgg agccctaccc gaccctgtcg tggctgaaga ccctggtcga
     4981 gatcggcgcc atcgccggcc tgtcctcggt ggtgctggtg atgatgatgg gccagacccg
     5041 catcgcctac accatctccc gcgacggcct gctgccgaag ttcttcggca aggtccacgc
     5101 ccgcttccgc accccgtacg tcgccaccat cgtggtcggc gtgatcgccg ccgcactggc
     5161 cggcctggtg ccgctgaacg tgctgggcga actggtctcg atgggcaccc tgctggcctt
     5221 cgccacggtc tgcatcggcg tgctggtgct gcgctatacc aagccggaga tccaccgccc
     5281 gttccgcgtg ccgatggtgt ggatcatctg cccgctgggc gcggccacct gcctgttcct
     5341 gttctggcag gcgttcgtgg tgcactggca cctgttcgtt ggctggacgc tgctcggcct
     5401 gctgatctac ctgggctacg gcatccgcaa cagcaagctg gccaagtcac cctgatccgc
     5461 ctacgggccg gcctcgcgcc ggcccgtccg ttttccccgc gcgcccctgg cggcgcgctt
     5521 cgacaagacc accacacatg ttcaagcaac tgtgggccac caagcacccg catgccgccc
     5581 atgaagacgc caacggcctc agcctgcgcc gccacctcgg cccctggggg ctgaccgccc
     5641 tcggcatcgg cgcggtgatc ggcggcggca tcttcgtcat caccggccag gccgccgcca
     5701 accacgccgg cccggcgatc atgctgtcgt tcgtgctggc cgccatctgc tgcgccttct
     5761 gcgcactggc ctacgccgag ttcgcctcga tggtgccggt gtccggcagc gcctacacct
     5821 atacctatgc caccttcggc gagctctcgg cctggttcat cggctggatg ctggtgctgg
     5881 agtacggcgt ctccgcgtca gccgtggcgg tcagctggac cggctatttc ctcagcctgc
     5941 tcagccagtt cgacatccat ctaccggcgg cgctggtcag cgcgccactc gacgcgcagc
     6001 tgcgcccgac cggcgcgatc gccaacctgc cggccgccgc gctggtactg ctgctgacct
     6061 ggctgtgcta cgtcggcatc agcaagtcct cggcgatgaa catggcgatg gtcgtgctca
     6121 agaccggcct gatcgtgctg gtcatcgtgg tcggctggaa gtacgtcgac accagcaact
     6181 ggaccccgtt catccccgcc aacgaaggcc ccggcaagta cggcatggaa ggcgtgctgc
     6241 gtggcgcggc gatggtgttc ttcgcctaca tcggcttcga ggcggtgtcg gtggcggcgc
     6301 aggaatcgaa gaacccgcag cgcgacatgc cgatcggcat gatgctgtcg ctggcggtct
     6361 gcaccgtgct gtacatcgcc atggccgctg tgatgaccgg cctggtgccg taccagctgc
     6421 tgggcaccga cgagccggtg gtgaccgcag tggccgcgca tccgcagctg ggctggctgc
     6481 gctgggtggt cgaggtcggc gcgctggtcg gcctgtcctc ggtggtgctg gtgatgatca
     6541 tcggccagcc gcgcatcttc atgatcatgg gccgcgatgg cctgctgccg ccggtgttca
     6601 ccaagatcca tccgaagtac cgcaccccgc acatcaacac cgtgatcacc ggcatcggca
     6661 tcgcgctgct ggcggcgctg ttcccgctgg acatcctggg tgagctgacc tcgatgggca
     6721 cgctgatcgc gtttgctgcg gtgtgtgccg gcgtgctgat cctgcgccgc acccagccgg
     6781 acctgccgcg cccgttccgc atgccgatgg cgtggctgat ctgcagcctg ggcgtgctga
     6841 gctgcctggc gctgctgtcg gcgatgacga tgcacaactg gatgctgatg ggcgtgtgga
     6901 cgttcgtcgg cttcgtgatc tatttctgct acggcttcaa gcacagccgt ctgcggggga
     6961 agtaaggggt tttgcattgc agggcctgcg gccctgcacc cgctggggca acgtcaacgg
     7021 caacagcggg tctgagggtt tggcggggag gcatgggttc gcgggggacg ccgtgaatcc
     7081 atccc
//
LOCUS       DAOKIP010000197         7061 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.198,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000197 DAOKIP010000000
VERSION     DAOKIP010000197.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 7061)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7061)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7061
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.198"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..1097)
                     /locus_tag="QEL58_003330"
     CDS             complement(<1..1097)
                     /locus_tag="QEL58_003330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012481243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkene reductase"
                     /protein_id="HDS1677766.1"
                     /translation="MTATLFHPFDLAGTALRNRIAMAPMTRARNPGSVANDLTAQYYR
                     QRASAGLIISEGTPVSPQGQGYIDVPGIWSAEQVAGWKQVTQAVHAAQGTIFAQLWHV
                     GRMSHASLQPGGGQPVSAGTRPVASAPKNTSFVYLDDGSRGHADPTPARALDTAEIPG
                     IVDDFVRGADNAIAAGFDGIELHAANGYLFEQFLNPLINQREDRYGGSLPNRARLILE
                     TVDAMAERIGAHRIGVRLAPNNLTFDMPFYPDNEATYLYLAEELGKRGLAYVHLNDNL
                     QQGESVLGEAFLQQFKQSYGGTLILAGGMTRERALQLVEAGTIDLAAFGQPFIANPDL
                     VERLQHDIALATPDRSSYYGGDEAGYLDYPRA"
     gene            1229..2134
                     /locus_tag="QEL58_003331"
     CDS             1229..2134
                     /locus_tag="QEL58_003331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006384676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDS1677767.1"
                     /translation="MLPLESLNGLVTFVTTARSGSFTEAADTLGISRSAVGKAIARLE
                     ARLGVRLFHRTTRRIALTTDGEAYYASCAAALEEISAAEACLGSAGLPSGRLRIDMPS
                     SFGRLVVLPVLLRLCRQYPDLQLTMTFTDHFVDPVEEGIDLLIRFGGLHQAEHLVARR
                     LGRQRLVTCAAPAYLQAHGVPGSVEELAQHRSIVGFRHGQPVAWRIGSDDAEGTFIPN
                     AAYQLNDGDAVIDAAIAGLGICQMPASLVRRHLQSGALQSVLDAHMQRHIDIHALWPP
                     TRHLRPKVRYVVDELTRLAGEGLFD"
     gene            2205..2480
                     /gene="frmR"
                     /locus_tag="QEL58_003332"
     CDS             2205..2480
                     /gene="frmR"
                     /locus_tag="QEL58_003332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011260271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formaldehyde-responsive transcriptional
                     repressor FrmR"
                     /protein_id="HDS1677768.1"
                     /translation="MPHSPEEKKKVLARVRRIRGQCDALDRALEAGADCAPVLQQIAA
                     IRGAVNGLMSEVMEAHLREEFGQPAASDEQRAERVRDMSALIRSYLK"
     gene            2540..3649
                     /locus_tag="QEL58_003333"
     CDS             2540..3649
                     /locus_tag="QEL58_003333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003477647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-(hydroxymethyl)glutathione dehydrogenase/class
                     III alcohol dehydrogenase"
                     /protein_id="HDS1677769.1"
                     /translation="MKSRAAVAFGPGQPLQIVEIDVAPPKAGEVLVRITHTGVCHTDA
                     FTLSGDDPEGLFPVVLGHEGAGIVVEVGEGVTSVKPGDHVIPLYTAECGECLFCKSGK
                     TNLCVAVRATQGKGVMPDGTSRFSYNGEPLYHYMGCSTFSEYTVVAEVSLAKINPDAN
                     PEHVCLLGCGVTTGIGAVHNTAKVQEGDSVAVFGLGGIGLAVIQGARQAKAGRIIAVD
                     TNPSKFELAREFGATDCINPKDHDTPIQQVIVEMTTWGVDHSFECIGNVNVMRAALEC
                     AHRGWGQSVVIGVAGSGQEISTRPFQLVTGRKWMGTAFGGVKGRSQLPGMVEDAMKGD
                     IELAPFVTHTMDLDKINDAFDLMHEGKSIRSVVHY"
     gene            3700..4530
                     /gene="fghA"
                     /locus_tag="QEL58_003334"
     CDS             3700..4530
                     /gene="fghA"
                     /locus_tag="QEL58_003334"
                     /EC_number="3.1.2.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010480872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-formylglutathione hydrolase"
                     /protein_id="HDS1677770.1"
                     /translation="MERIEHRACFGGWQDVYRHHSTTLGCDMQFAVYLPPQAETQALP
                     VLYWLSGLTCTEQNFITKAGAQRYAAEHGVIIVAPDTSPRGDDVADAEGYDLGKGAGF
                     YLNATRAPWAKHYRMHDYVAQELPALIEANFPATGARAISGHSMGGHGALMIALRNPG
                     RYRSVSAFSPIVAPSHVPWGQKAFHAYLGDNPADWAQWDTCALVATASERLPLLVDQG
                     GADEFLQTQLQPERLQQACDAAGHPLTLRLQPGYDHSYYFIASFIGEHVAHHARALQG
                     "
     gene            4689..6134
                     /locus_tag="QEL58_003335"
     CDS             4689..6134
                     /locus_tag="QEL58_003335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014038456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HDS1677771.1"
                     /translation="MPVVLALLYVLCHGLVVTLWPGATGVGSFVFLTGAPLLAAMACL
                     WRARRERAALGWRATALALLLWAGGMAFNMIDALGAGRADITPQASLFLYVLYGVPLV
                     FILARARRERLSISLIDAAMAALLGVLFFVHTQSFAARIDIDDSAMASMQRMFDIQNL
                     CIAGFAVVRWLAGDVPERRGFFRVLALYALAYLLVAYYINHYTSGDSFGAYNDLLIDL
                     PFLLLALLALSRVPVPGSAPHPRLARTVQAAGPMILPLLLLVVGTLVVDHARPLAVSG
                     FVVATLGFGLRSILLQTDLMERQAGLDQLARQDGLTGVANRREFDALLLAEWNRARRS
                     GSPLGLLLVDIDHFKAFNDQHGHPAGDRCLQAVAAVLKAIAGRAGDSVARYGGEEFAV
                     IVPGSALSGVLALAERLREAVEALPLPEGSVSISIGVGYLHPPALASADQLLADADAG
                     LYAAKRAGRNQVVLHAHVLDDEGSTHGTMDC"
     gene            complement(6169..6639)
                     /locus_tag="QEL58_003336"
     CDS             complement(6169..6639)
                     /locus_tag="QEL58_003336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005411004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677772.1"
                     /translation="MAFRSPLFPTRVNYRAFGRQLGRGEQALLAAIRQLREPDLRADG
                     LAGLSDLGLDPEGCDAFINLLPLLATAAAPIDLLRSGSPFIAASELDLLACLLRIAQW
                     RHARPRDDDTLAPLRRQLARCALAVHAAKLPLRQRSLSPVGLRLLDPGGWLRQR"
     gene            complement(6645..>7061)
                     /locus_tag="QEL58_003337"
     CDS             complement(6645..>7061)
                     /locus_tag="QEL58_003337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005411003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HDS1677773.1"
                     /translation="GGPQHARVLDLAAAIAGPRSRLHLLCVLDPEFALAADASEADRI
                     EYPEAARQRSRAEAVLAEALAELRERGVDAIAQIPSGDPGEVISEQAKRLKCDLIVIG
                     HRHLSRLQRLFEPSIGQWTIDHAPCPVLVETRDPQP"
BASE COUNT         1075 a         2304 c         2505 g         1177 t
ORIGIN      
        1 gcgcgcgggt aatcgagata gccggcttcg tcgccaccgt agtagctgct gcggtccgga
       61 gtggccagtg cgatgtcgtg ctgcaggcgc tcgaccagat ccgggttggc gatgaacggt
      121 tggccaaacg cagccagatc gatggtgccg gcctcgacca gctgcagggc gcgctcgcgg
      181 gtcatgccgc cagccaggat cagcgtgccg ccgtaagact gcttgaactg ctgcaggaac
      241 gcctcaccca gcaccgattc accctgttgc agattgtcgt tgaggtgcac gtaggccagc
      301 ccgcgctttc ccagttcctc ggccaggtac agataggtgg cttcgttgtc ggggtagaac
      361 ggcatgtcga aggtgaggtt gttcggggcc agccgcacgc cgatgcggtg cgcgccgatg
      421 cgttcggcca tcgcatccac cgtctccagg atcaaccgcg cacggttcgg cagcgagccg
      481 ccgtagcggt cctcgcgctg gttgatgagc gggttgagga actgttcgaa caggtagccg
      541 ttggcggcat gcagttcgat gccgtcgaag ccggcggcga tcgcgttgtc ggcaccgcgc
      601 acgaagtcgt cgacgatgcc tggaatctcg gccgtatcca gcgcacgtgc cggagtggga
      661 tcggcgtggc cgcggctgcc gtcgtccagg tacacgaacg aggtgttctt cggtgcgctg
      721 gcgaccgggc gggtgccggc gctgaccggc tggccacccc cgggctgcag cgaggcatgc
      781 gacatgcggc ccacgtgcca gagctgggcg aagatcgtgc cctgcgcggc atgcaccgcc
      841 tgggtgacct gcttccaacc cgccacctgt tcggccgacc agatgcccgg cacgtcgatg
      901 tagccctggc cctgcggcga gaccggcgtg ccttcgctga tgatcaggcc ggcactggca
      961 cgctgccggt agtactgcgc ggtgaggtcg ttggcgaccg acccggggtt gcgggcacgg
     1021 gtcatcggcg ccatcgcgat gcggttgcgc agggcagtgc cggccaggtc gaacgggtgg
     1081 aacagggtgg cggtcatctc ggttatctcg gtgcgggggg aggggcgcca gcggcgccat
     1141 gcacacagga tggagttgac atgcgggcgc ataaagcgct tcgatttccc ttggtgcggg
     1201 actatttgtc cctaatgagg gattgaagat gctgccgctg gaatccttga atggcctggt
     1261 cacgttcgtc accacggccc gctcgggcag tttcaccgag gccgccgata cgctgggcat
     1321 ctcgcgctcg gccgtgggca aggccatcgc ccggctggaa gcgcggctgg gcgtgcgcct
     1381 gtttcatcgc accacgcggc gcatcgcgct gaccaccgat ggcgaggcct attacgcttc
     1441 gtgtgcggcc gcgctggaag agatttccgc cgccgaggcc tgcctgggct cggccggcct
     1501 gcccagcggg cggctgcgca tcgacatgcc gtcctcgttc gggcggctgg tggtgctgcc
     1561 ggtgctgttg cgcctgtgcc ggcaataccc ggacctgcag ctgacgatga ccttcaccga
     1621 tcacttcgtc gatcccgtcg aggaaggcat cgacctgctg atccgtttcg gcggcctgca
     1681 ccaggccgag cacctggtcg cgcgccggct gggccgccag cgcctggtca cctgcgccgc
     1741 gccggcctac ctgcaggcgc acggcgtgcc gggcagtgtg gaggaactgg cacagcaccg
     1801 cagcatcgtt ggcttccgcc acgggcagcc ggtagcgtgg cgcatcggca gtgatgatgc
     1861 cgaaggaacc ttcatcccca acgcggccta ccagctcaac gacggcgatg cggtgatcga
     1921 cgccgccatc gccgggctgg gcatctgcca gatgccggcg tcgctggtac gccgtcacct
     1981 gcaatccggc gcgctgcaat cggtgctgga cgcgcacatg cagcgccaca tcgacatcca
     2041 cgcgctgtgg ccgccaaccc gtcacctgcg gccgaaagtg cgctacgtgg tggatgaact
     2101 gacgcggctg gcgggcgagg ggttgttcga ttgagcgcgc gggattgagc cgcccggggc
     2161 tgcgtgtata ctatccccca gtatagttct gaggtggccc cgccatgccg cactcccccg
     2221 aagagaaaaa gaaggtgctg gcccgcgtgc gccgcatccg cggccagtgc gatgcgctcg
     2281 atcgcgcgct ggaagccggt gccgactgcg cgccggtgct gcagcagatc gccgccatcc
     2341 ggggcgcggt caacggcctg atgtccgagg tgatggaggc gcatctgcgc gaggagttcg
     2401 gccagcctgc ggcttccgat gaacaacgcg ccgaacgcgt gcgcgacatg agcgcgttga
     2461 tccgctcgta cctgaagtaa acgacggcgc aacgttgcgc cgcgcatcct gttactgcct
     2521 gtctttggag aagccaccca tgaagtcccg tgccgccgtc gcctttggtc ccggccagcc
     2581 gctgcagatc gtcgagatcg acgtcgcccc gccgaaggcc ggcgaagtgc tggtcaggat
     2641 cacccacaca ggtgtgtgcc acaccgatgc gttcaccctg tccggcgacg atccggaagg
     2701 cctgttcccg gtggtgctgg gccatgaagg cgcgggcatc gtggtggagg tgggcgaggg
     2761 cgtgaccagc gtcaagccgg gcgaccacgt gattccgctg tacaccgccg aatgtggcga
     2821 gtgcctgttc tgcaagagcg gcaagaccaa cctgtgcgtg gccgtgcgcg ccacccaggg
     2881 caagggcgtg atgcccgacg gcaccagccg cttcagctac aacggcgaac cgctgtacca
     2941 ctacatgggc tgctcgacct tcagcgagta caccgtggtg gccgaggttt cgctggcgaa
     3001 gatcaatccg gacgcgaacc cggaacacgt ctgcctgctc ggctgcggtg tcaccaccgg
     3061 catcggcgcg gtgcacaaca ccgccaaggt gcaggaaggc gacagcgtgg cggtgttcgg
     3121 cctcggcggc atcggcctgg cggtgatcca gggtgcgcgc caggccaagg ccggccgcat
     3181 cattgcggtg gacaccaatc cgtccaagtt cgagctggcc cgcgagttcg gtgctaccga
     3241 ctgcatcaac ccgaaggacc acgacacgcc catccagcag gtcatcgttg aaatgaccac
     3301 ctggggcgtg gaccacagct ttgaatgcat cggcaacgtc aacgtgatgc gcgcggcgct
     3361 ggaatgcgcg caccgtggct ggggccagag cgtggtgatc ggcgtggccg gttcgggcca
     3421 ggagatctcc acccgtccgt tccagctggt gaccggccgc aagtggatgg gcaccgcctt
     3481 cggcggcgtg aagggtcgca gccagctgcc cggcatggtc gaggacgcga tgaagggcga
     3541 tatcgaactg gcgccgttcg tcacccacac catggacctg gacaagatca acgacgcctt
     3601 cgacctgatg catgaaggca agtcgatccg ttcggtggtc cactactgag ccgcgccggg
     3661 tggcaggctt gagggcctgc cgcccctcgg gaggaaccca tggaacgcat cgaacaccgc
     3721 gcctgcttcg gtggctggca ggacgtctac cgtcatcatt cgaccacgct gggctgcgac
     3781 atgcagttcg ccgtgtacct gccgccacag gcggagacgc aggcgctgcc agtgctgtac
     3841 tggttgagcg ggctgacctg caccgagcag aacttcatca ccaaggccgg cgcgcagcgc
     3901 tatgcggccg agcacggcgt gatcatcgtt gcgcccgaca ccagcccgcg tggcgatgac
     3961 gtggctgatg ccgaaggcta cgacctgggc aagggggcag ggttctacct caacgccacc
     4021 cgtgcaccgt gggcgaagca ttaccgcatg cacgactatg tggcccagga actgccggcg
     4081 ctgatcgagg cgaacttccc cgcgaccggc gcgcgggcga tcagtggcca ttcgatgggc
     4141 ggccacggtg cgctgatgat cgcgctgcgt aatccggggc gctaccgtag cgtgtcggcg
     4201 ttctcgccga tcgtcgcgcc cagccatgtg ccatgggggc agaaggcgtt ccacgcctac
     4261 ctgggcgaca acccggccga ctgggcgcag tgggatacgt gcgcgctggt ggcgacggcc
     4321 agtgagcgcc tgcccctgct ggtcgaccag ggcggggccg acgagttcct gcagacccag
     4381 ctgcagcccg agcgcctgca gcaggcctgc gatgcggccg gccacccgct gaccctgcgc
     4441 ctgcagcccg gctacgacca cagctactac ttcatcgcca gcttcatcgg cgagcacgtg
     4501 gcacaccacg cccgcgccct ccaaggctga cacccccgaa aaaggggacg gaggggatta
     4561 agtcgctttt gccattgtgc cgaaagcgac ttaatcccct ccgtcccctt tttctgcgct
     4621 ggatcacgcc atcgtggcgc ggcgccgcgc tatcgtgcgc gcatacggcc ttgcggatcg
     4681 ggggaggcat gccggtagtg ctggcgctgc tgtacgtgct gtgccatggc ttggtcgtga
     4741 ccctgtggcc gggggcgacc ggcgtgggct ccttcgtttt cctgaccggc gcgccgctgc
     4801 tggcggcgat ggcctgcctg tggcgggcac gccgcgagcg cgccgcgctt ggctggcgtg
     4861 ccacggcgct ggcgttgctg ctgtgggccg gcggcatggc cttcaacatg atcgatgcac
     4921 tcggcgccgg ccgcgccgat atcacgccgc aggccagcct gttcctgtac gtgctgtacg
     4981 gcgtcccgct ggtgttcatc ctggcccgcg cgcgccgtga gcgcctgagc atcagcctga
     5041 tcgacgccgc gatggcggcg ctgctgggcg tgctgttctt cgtgcatacg caatcgttcg
     5101 ccgcccgtat cgatatcgac gattcggcga tggccagcat gcagcgcatg ttcgatatcc
     5161 agaacctgtg catcgccggg ttcgcggtgg tgcgctggct ggccggtgat gtgcccgagc
     5221 ggcgcggctt cttccgggtg ctggcgctgt acgcgctggc gtacctgctg gtggcctact
     5281 acatcaacca ctacacctcg ggtgattcct tcggcgccta caacgatctg ctgatcgacc
     5341 tgccgttcct gctgctggcg ttgctggcgt tgagccgggt gccggtaccg ggctcggcgc
     5401 cgcatccacg gctggcgcgc accgtacagg ctgcggggcc gatgatcctg ccgttgctgc
     5461 tgctggtggt gggcacgctg gtggtcgacc acgcgcgacc gctggcggtc agtggcttcg
     5521 tggtggccac gctgggcttc ggcctgcgca gcatcctgct gcagaccgac ctgatggaac
     5581 gccaggccgg cctggaccag ctggcgcgcc aggatggcct gaccggggtt gccaaccgcc
     5641 gcgagttcga cgcgctgctg ctggcggagt ggaaccgcgc acggcgcagt ggcagcccgc
     5701 tgggcctgct gctggtggac atcgaccatt tcaaggcctt caacgaccag cacggccatc
     5761 cggctggcga tcgctgcctg caggccgtgg ccgcggtgtt gaaggccatc gccggccgcg
     5821 ctggcgacag cgtggcgcgc tatggcggcg aggaattcgc ggtgatcgtg cctggaagcg
     5881 cgctgtcggg cgtgctggcg ctggccgaac ggctgcgcga ggcggtggag gccctgccgc
     5941 tgccggaagg gtcggtcagt atcagcatcg gcgtgggcta cctgcatcca ccggccctgg
     6001 ccagtgccga tcagttgctg gcggacgccg atgccggcct gtatgccgcc aagcgggccg
     6061 gccgcaacca ggtggtgctg cacgcgcatg tgctggatga cgaaggcagc acgcacggca
     6121 cgatggattg ctgaaggcca tggttcccgt ggtgcctgcg cgtgcgcatc atcgctgccg
     6181 cagccagccg cccggatcga gcaggcggag cccgaccggt gacaatgagc gctgccgcag
     6241 tggcagcttc gccgcgtgca ccgcgagtgc acagcgtgcc agttgccggc gcaacggcgc
     6301 cagcgtgtca tcgtcgcggg ggcgtgcgtg ccgccactgt gcaatacgca gcaggcaggc
     6361 cagcaggtcc agttcgctgg cggcgatgaa cggcgagccg gatcgcagca ggtcgatcgg
     6421 cgcggcagcc gtggccagca gcggcagcag gttgatgaac gcgtcgcagc cctcgggatc
     6481 aaggccgagg tcgctcaacc cggccagccc atcggcccgc aggtcgggct cgcgcagttg
     6541 gcgtattgcc gccagcagcg cctgttcgcc acgacccaac tggcggccga atgcccggta
     6601 gttgacgcgg gtaggaaaca agggggaacg gaaggccatg gcagctaggg ttgggggtcg
     6661 cgggtttcca ccagcacggg acagggcgcg tggtcgatgg tccattgccc gatcgagggt
     6721 tcgaacaggc gttgcaggcg ggacaggtgg cggtggccga tcacgatcag gtcgcacttc
     6781 aggcgcttgg cctgttcgct gatgacttcg ccgggatcgc cggagggaat ctgcgcgatg
     6841 gcatcgacgc cgcgttcgcg cagttcggcc aaggcttcgg ccagcaccgc ttcggcgcgc
     6901 gagcgctggc gggcagcttc cggatattcg atgcggtcgg cttcgctggc atcggcggcc
     6961 agcgcgaatt cgggatcgag cacgcacagc aggtgcaggc gactacgcgg gccggcgatg
     7021 gccgcggcga ggtccagcac gcgcgcgtgc tgggggccgc c
//
LOCUS       DAOKIP010000198         7027 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.199,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000198 DAOKIP010000000
VERSION     DAOKIP010000198.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 7027)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7027)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7027
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.199"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            112..771
                     /locus_tag="QEL58_003338"
     CDS             112..771
                     /locus_tag="QEL58_003338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010482953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB family protein"
                     /protein_id="HDS1677774.1"
                     /translation="MVRTYPVASPHFDPARVAAWSAAIALHLLAFLLLLIPATYQAIT
                     TLPRDTTTVRLIPRELPKPLPPPPKYVEPQHVDVVPKQQSVPKETTPLPTPTATLEEA
                     QGIITPAAESTPVQSAPGIDRSTPLAGAQLQYRSAPPPSYPVPALRNHEQGTVLLRVE
                     VDSSGQPVAVSIERSSGSRSLDLAARQQVLKRWRFEPAQRDGIAVPAIGLVPVQFSLP
                     D"
     gene            971..3778
                     /locus_tag="QEL58_003339"
     CDS             971..3778
                     /locus_tag="QEL58_003339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010482951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDS1677775.1"
                     /translation="MKHLIQRPASRRRCTLASSITHVLAGGTLLLVGTMASSSAFAQE
                     KATNLDRITVTGSNIPRTNTETPSPVQVVTRQEIDRTGKTSLAEYLQTITADGAGSIP
                     KTFGNGFAGGGAGISLRGLGAGSTLVLLNGRRMATYGLADDGQKVFTDLSTIPLDAVE
                     RVEVLKDGASAIYGSDAIAGVVNIILRSDFQGVILRGSYGLSGDSDGDAKKATLTAGT
                     GDLATDGWNAFFSLDVGKTDAIKLSDRKNRKWIGTGDTRPWGYDKTAQFLGGAYTRGG
                     TSGGSGPNGSYLDATGHLVPLPGCEGLTTIGGQTPASIAADGCLFDPAQQYRDLIPEE
                     KYVNVFGRASFAFGEGGEIYTEIGYSKKETIFSNTPSGVSGGWGYPGGPVNANSGPGA
                     TVLGANHPDNPFYGQPGATPVRVRYSAWDVGPRVTDNTNEFNRFLVGIKGNWGDWSYD
                     TAYLHSGTDLTNERTGFLRYSAVQCALGNANCAGGVWRIGDDAGKNSQALYDYISPKI
                     SARAKSSLDMFDFTVSRSLMDLKGGPLGLAIGTEWRKTSNSLTPQTYTDQGDIIGLGY
                     SAYDGTQNVYAGYVELSAPVLEQLELSGALRYDKYESGEGKATPKLGVKWTPADWIAL
                     RASYAEGFRAPNPAENGDGGLAAFSSAVDPVRCQISGGAASECGANSVAIITKPNKLL
                     KPEESKSYSIGLVLQPTSTTSMTVDAWQIKRTNEIVQGNTEDAILAGNVLRDSNDLNG
                     VANSGTILAVNTGYVNASSSRVRGIDTDIRQTFEIGPGQLELDLQWSHILKFERTEAG
                     KTVDYVGTHGNCDVTNCIGTPKDKVNFGTTWKQGPWSVSGIVNYISKMDNTGSRGGSY
                     LAFYADETPVTKISSFTTMDLSGRWSINDSFELNASVANVFDRIAPLDPTTYGAVNYN
                     PMHFSGALGRYYTVGFKYTFK"
     gene            3917..5338
                     /locus_tag="QEL58_003340"
     CDS             3917..5338
                     /locus_tag="QEL58_003340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012480928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HDS1677776.1"
                     /translation="MAATSQRLGLPALTALVVGSMVGAGIFSLPQNVARSAGPAAALI
                     GWAVSGAGMLMLAFVFQALANRRPDLDTGIYAYAREGFGNYIGFSAAWGYWVASVLGN
                     ASFFVLIFSGLGHFMPVFGEGNTPAAVAASSVLLWTVHLLVLRGLRTAAIVNGLVTVA
                     KLLPIALFLVFAAGAFRLDVFRADFLGTPALGDLGQQLRGMMLVTVWVFIGIEGASIY
                     SRRAARRADVGRATVIGFLGVWLLLVLVSLLSMGVLSQAELAGLPNPSMAYVLRAIVG
                     EWGATVIIIGSIISVLGALLAWVLLCAEVLYAAAGDGTMPAFLGRENARGVPANALWL
                     SNGLIQLFLLLVLVNAGSYTGLVLLAASMSLVPYFLSTAFGVQLAWRGHAYAGEPSVR
                     WRDFGVALLASAYALWLVYAGGLDNLLLSVLLYVPGVVLFALTRRQRGERVFTRWEWV
                     LFGAILLVAIATLVAFSKGQLTL"
     gene            complement(5359..6333)
                     /locus_tag="QEL58_003341"
     CDS             complement(5359..6333)
                     /locus_tag="QEL58_003341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDS1677777.1"
                     /translation="MLIVRALLLLGSLLLVVLPFASAKAEPPTWHPPQGATELPLWPD
                     GKAAVPPKLKGPEQLSEAISEASGERWMMLQNVAVPTLTVFPPREPGNGAAVMVVPGG
                     GYRVLAMDLEGSEICQWLTTQGITCALLKYRVPASGPNWDRDCNCRDIPSVPMALQDA
                     QRAMGMLRAQAARWKIDPKRIGVIGFSAGGHVVAGLSTHARRSYTPIDAADAQPSRPD
                     FAMVMYSGHLWAGHGKGLSLVKDIVVDDKVPPTFIAQATDDRTDDVRESLAYYRALID
                     AGVPVEMHLFARGGHAFGLRRQDAPVAAWPHLAERWMQDIGMLPERPL"
     gene            complement(6467..6543)
                     /locus_tag="QEL58_003342"
     tRNA            complement(6467..6543)
                     /locus_tag="QEL58_003342"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(6507..6509),aa:Asn,seq:gtt)
     gene            complement(6566..>7027)
                     /gene="rlmH"
                     /locus_tag="QEL58_003343"
     CDS             complement(6566..>7027)
                     /gene="rlmH"
                     /locus_tag="QEL58_003343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019301047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (pseudouridine(1915)-N(3))-methyltransferase RlmH"
                     /protein_id="HDS1677778.1"
                     /translation="RLIATGERAPSWVAQGFAEYQKRLSHWLPFELVEIEPGLRGKGR
                     DPRRATEDEGKRVIAALPKNAYVVALDVPGRQLSSEQLAQRLEHWRGQGRDLAFLIGG
                     PEGHSPEVSALADEKWSIGPLTLPHMLVRLVVAEQLYRAAAMIANHPYHRA"
BASE COUNT         1196 a         2414 c         2204 g         1213 t
ORIGIN      
        1 tctaggcagt ggccgccatg ccgcgctact gatgcactgc cagccgcgtg cggcaacccc
       61 gccacgggcc ctggtgcgtt gaggacttcg tcactggcat ggaggtggac catggttcgt
      121 acgtatcccg ttgcatcccc gcacttcgac cccgcccgcg ttgccgcctg gagcgcggcc
      181 atcgccctgc atctgctcgc gttcctgttg ttgctgattc cggccaccta tcaggccatc
      241 accacactgc cgcgcgacac caccacggtg cggctgattc cgagggaact gcccaagccg
      301 ctgccgccgc cgcccaagta cgtggagcca cagcacgtgg acgtcgtgcc gaagcagcag
      361 agcgtgccga aggaaacaac gccgttgccg acgccgaccg ccacgctgga ggaggcacag
      421 ggcatcatca cgcccgccgc ggaatcgaca ccggtgcagt cggccccggg catcgaccgt
      481 tcgacaccgt tggccggtgc ccagctgcag taccgcagcg ccccaccgcc gtcctatccg
      541 gtgccggcgt tgcgcaacca cgagcagggc acggtgctgc tgcgggtgga ggtcgacagc
      601 agcggccaac cagtcgcggt cagcatcgag cgcagcagcg gctcgcgcag cctggacctg
      661 gccgctcgcc agcaggtgct caagcgctgg cgcttcgagc ccgcacagcg tgatggcata
      721 gcggtaccgg ccatcggcct ggtaccggtg cagttctcgc tgccggactg aggctttcag
      781 ggccgcccgg caacctttcc gggccggcct tcacacgcga aaggacagac tcggcaaagt
      841 ccgcgatcaa gcgttacgaa ttaagcaaaa tttcactact tcgtcacctg tcggaaacct
      901 agattgatcc gtcccggaca gtaccggaga cagccctcaa cgctacggtt ttccagttag
      961 gagagaagct gtgaaacacc tgatccaacg gcccgccagc cgccgccgct gcaccctggc
     1021 atcgtccatc acccacgtcc ttgccggcgg caccctgctg ctggtgggca ccatggcttc
     1081 ctcctccgcc ttcgcgcagg aaaaggccac caacctcgac cgcatcacgg tcaccggttc
     1141 gaacatcccg cgtaccaaca ccgaaacacc gtccccggtg caggtggtga cccgccagga
     1201 aatcgaccgc accggcaaga cctcgctggc cgagtacctg cagaccatca ccgccgatgg
     1261 cgccggctcg attcccaaga ccttcggcaa cggctttgcc ggcggtggcg cgggcatctc
     1321 gctgcgcggc ctgggcgccg gctcgacgct ggtattgttg aatggccgtc gcatggcgac
     1381 ctatggcctg gccgatgacg gccagaaggt cttcaccgac ctgagcacca tcccgctcga
     1441 cgccgttgaa cgcgtggaag tgctgaagga cggcgcctcg gcgatctatg gttccgatgc
     1501 catcgccggc gtggtcaaca tcatcctgcg cagcgacttc cagggcgtca tcctgcgcgg
     1561 ctcctacggg ctgtccggtg acagcgatgg cgacgccaag aaggcgaccc tgaccgccgg
     1621 taccggcgat ctggccaccg atggctggaa tgcgttcttc agcctggacg tgggcaagac
     1681 cgacgcgatc aagctgagcg accgcaagaa ccgcaagtgg atcggtaccg gcgacacccg
     1741 cccgtggggc tatgacaaga ccgcgcagtt ccttggcggt gcttacaccc gtggcggcac
     1801 ttccggcggc tccggcccca acggatccta cctcgacgcc accggccacc tggttccgct
     1861 gcccggctgc gaaggcctga ccaccatcgg tggccagacc ccggccagca ttgccgccga
     1921 cggctgcctg ttcgatccgg cgcagcagta ccgcgacctg attccggaag agaagtacgt
     1981 caacgtgttc ggccgcgcca gcttcgcctt cggcgagggc ggcgagatct acaccgagat
     2041 cggctactcg aagaaggaaa ccatcttcag caacaccccg tccggcgtgt cgggcggctg
     2101 gggctacccg ggcggtccgg tcaacgccaa ctcgggcccg ggtgccaccg tgctgggtgc
     2161 caaccacccg gacaacccgt tctacgggca gccgggcgcc accccggtcc gcgtgcgcta
     2221 ctcggcctgg gatgtcggcc cgcgcgtgac cgacaacacc aacgagttca accgcttcct
     2281 ggtcggcatc aagggcaact ggggcgactg gagctacgac accgcctacc tgcactcggg
     2341 taccgacctg accaacgagc gcaccggctt cctgcgctac agcgccgtgc agtgcgcact
     2401 gggcaatgcg aactgcgccg gtggcgtgtg gcgcatcggt gatgatgccg gcaagaactc
     2461 gcaggcgttg tacgactaca tctcgccgaa gatcagcgcg cgtgccaagt cgagcctgga
     2521 catgttcgac ttcaccgtgt cgcgcagcct gatggacctc aagggtggcc cgctgggcct
     2581 ggcgatcggt accgagtggc gcaagaccag caacagcctg accccgcaga cctacaccga
     2641 ccagggcgac atcatcggcc tgggctattc ggcctacgac ggcacccaga acgtctacgc
     2701 cggctacgtc gaactgtcgg caccggtact ggagcagctg gaactgtccg gcgcactgcg
     2761 ttacgacaag tacgaaagcg gtgaaggcaa ggccacgccg aagctgggcg tgaagtggac
     2821 cccggccgac tggatcgccc tgcgcgccag ctacgccgaa ggcttccgtg cgccgaaccc
     2881 agccgagaac ggcgatggtg gcctggccgc cttctcctcc gcggtcgatc cggtgcgttg
     2941 ccagatcagt ggcggcgcag cgagcgagtg cggtgccaat tcggtggcca tcatcaccaa
     3001 gccgaacaag ctgctgaagc cggaagagtc caagagctac tcgatcggcc tggtactgca
     3061 gccgacctcg accacttcga tgaccgtcga cgcttggcag atcaagcgca ccaacgagat
     3121 cgtccagggc aacaccgaag acgccatcct tgccggcaac gtgctgcgtg acagcaatga
     3181 cctcaatggc gtggccaaca gcggcaccat cctggcggtc aacaccggct acgtgaatgc
     3241 cagttcctcg cgcgtccgcg gtatcgacac cgacatccgc cagaccttcg agatcggccc
     3301 gggccagctg gagctggacc tgcagtggag ccacatcctg aagttcgaac gtaccgaagc
     3361 cggcaagacg gtcgattatg tgggcaccca cggcaattgc gatgtcacca actgcatcgg
     3421 tacgccgaag gacaaggtca acttcggcac cacctggaag cagggcccgt ggagcgtcag
     3481 cggcatcgtc aactacatca gcaagatgga caacacgggc agtcgtggcg gcagctacct
     3541 ggccttctac gctgacgaaa cgccggtgac caagatctct tcgttcacca cgatggatct
     3601 gtcgggccgc tggagcatca acgattcgtt cgaactcaat gcctcggtgg ccaacgtgtt
     3661 cgatcgcatc gccccgctcg atccgaccac ctacggcgcg gtgaactaca acccgatgca
     3721 cttctccggt gcactgggcc gttactacac cgtcggcttc aagtacacgt tcaagtaaca
     3781 gcggcatcgc cgttgaatgc agcaccttcg aaggcccggg cacctgcccg ggccttcgtc
     3841 ttcctggccc ttgcaggcgt gttcacggcc acgcggctac cgtgtccacg cggcatcact
     3901 gccgcagggg atctccatgg ccgcaacatc gcaacgactg ggcctgcccg cgttgaccgc
     3961 actggtggtc ggctcgatgg tcggtgccgg catcttctcc ttgccacaga acgtcgcgcg
     4021 cagcgccggc ccggccgccg cactgatcgg ctgggcggtg agtggcgccg gcatgctgat
     4081 gctggccttc gtgttccagg cgctggccaa ccgccggccg gacctggata ccggcatcta
     4141 cgcgtatgcg cgcgagggct tcggcaacta catcggtttc tctgcggcgt ggggctactg
     4201 ggtcgcctcc gtgcttggca acgccagctt cttcgtgctg atcttcagtg gcctcggcca
     4261 cttcatgccg gtcttcggtg aaggcaatac gccggccgcg gttgccgcat cgtccgtgct
     4321 gctgtggacc gtgcatctac tggtgctgcg tggcctgcgc accgcggcca tcgtcaacgg
     4381 cctggtgacc gtggccaagc tgctgccgat cgcgctgttc ctggtgttcg ctgccggtgc
     4441 gttccgtctc gatgtgtttc gcgcagactt tctgggtacg cctgcactcg gcgacctcgg
     4501 ccagcagctg cgcggcatga tgctggtcac cgtgtgggtg ttcatcggca tcgagggcgc
     4561 cagcatctac tcgcggcgtg cagcccgccg cgccgacgtc ggccgcgcca cggtgatcgg
     4621 cttcctcggt gtctggctgc tgctggtact ggtcagcctg ctgtcgatgg gcgtgctgtc
     4681 gcaggccgag ctggccgggc tgcccaatcc ctcgatggcc tacgtgctgc gtgccatcgt
     4741 cggcgagtgg ggcgccacgg tgatcatcat cggttcgatc atttccgtac tcggtgcgct
     4801 gctggcctgg gtgctgctgt gtgccgaagt gctgtatgcc gcagcgggcg acggcaccat
     4861 gccggcgttc ctgggccgcg agaacgcacg cggcgtgccc gccaacgcgc tctggctgag
     4921 caacggcctg atccagctgt tcctgctgct ggtgctggtc aatgcgggca gctacaccgg
     4981 gctggtgctg ctggccgcgt cgatgagcct ggtgccgtat ttcctgtcca ccgcgttcgg
     5041 cgtgcaactg gcctggcgcg ggcacgccta cgcaggcgag ccgagcgtgc gctggcgcga
     5101 tttcggcgtc gcactgctgg ccagtgccta tgcgctgtgg ctggtgtatg ccggcggcct
     5161 cgacaacctg ctgctgtcgg tactgctgta cgtacccggc gtggtgttgt tcgcgctgac
     5221 ccggcgccag cgcggcgagc gggtgttcac gcgttgggag tgggtgctgt tcggcgcgat
     5281 tctgctggtg gcgattgcca cgctggtggc gttctcgaag ggccagctga cgctgtagag
     5341 ccgagcatgg gctcggctct acaacgggcg ttccggcaac atgccgatgt cctgcatcca
     5401 gcgctcggcc aggtggggcc atgccgcgac cggtgcatcc tgcctgcgca ggccgaacgc
     5461 atggccgccg cgtgcgaaca ggtgcatttc caccggcacg cccgcatcga tcaaggcacg
     5521 gtagtaggcc agcgattcgc gcacgtcatc ggtacggtca tcggtggcct gcgcgatgaa
     5581 cgttggcggc accttgtcat ccacgacgat gtccttgacc agcgacagtc ccttgccgtg
     5641 ccctgcccac aggtgcccgg aatacatgac catcgcgaaa tcgggccggc tcggctgtgc
     5701 atcggccgca tcgatcggcg tgtagctgcg ccgcgcatgc gtgctcaggc cagccaccac
     5761 atggccaccc gcggaaaagc cgatcacgcc gatgcgtttc gggtcgatct tccagcgcgc
     5821 ggcctgcgca cgcagcattc ccattgcacg ctgtgcatcc tgcagcgcca tcggcaccga
     5881 tgggatatcg cggcagttgc agtcccggtc ccagttcggt cccgacgccg gcacgcgata
     5941 cttgagcaac gcacaggtga tgccctgcgt ggtcagccat tggcagatct cgctgccttc
     6001 cagatccatc gcaagcacgc ggtagccacc gcccggcacc accatcactg cagcgccgtt
     6061 gcctggctcc ctcggcggaa acacggtgag ggtcggcacc gccacgttct gcagcatcat
     6121 ccagcgttcg ccactggctt cggaaatcgc ctcactgagc tgctcgggtc ccttcagttt
     6181 cggcggcacc gccgccttgc catccggcca caacggcagc tccgtggcgc cctgcggcgg
     6241 gtgccaggtg ggaggttcag ctttcgccga ggcgaacggc agcaccacaa gcagcagcga
     6301 gcccagcaac aggagtgcgc gcacgatcaa catccttggt cgatgacgct gcattgtaga
     6361 gtcgagcttg ctcgactgtc gtggccgatc aacagagcag tcgagcgagc tcgactctac
     6421 ccggcgcaaa aaaaaacctg cgtctcgcga tgcaggtttt tcaaagtggc gcccgaagtt
     6481 ggactcgaac caacgacccc ctgattaaca gtcaagtgct ctaaccggct gagctattcg
     6541 ggcagacgac tagtataacc actcttcacg cgcgatggta ggggtgattg gcaatcatcg
     6601 ccgcagcacg gtacagctgc tcggccacca ccagccgcac cagcatgtgc ggcagcgtca
     6661 gtggcccgat cgaccacttc tcatcggcca atgccgagac ttcaggcgaa tgcccttccg
     6721 ggccgccgat caggaaggcc aggtccctgc cctgcccacg ccaatgttcc aggcgctgcg
     6781 ccagctgttc ggaactgagc tggcgacccg gcacgtcgag cgcgaccacg tacgcattct
     6841 tcggcaatgc agcgatcacc cgcttgcctt cgtcttcggt ggcgcggcgc ggatcgcggc
     6901 ccttgccacg caggccaggc tcgatttcca ccagctcgaa cggcagccag tgcgacagcc
     6961 gcttctggta ctcggcgaac ccctgcgcga cccagctggg tgcgcgttca ccggtggcga
     7021 tcaggcg
//
LOCUS       DAOKIP010000199         7018 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.200,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000199 DAOKIP010000000
VERSION     DAOKIP010000199.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 7018)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7018)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7018
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.200"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..392)
                     /locus_tag="QEL58_003344"
     CDS             complement(<1..392)
                     /locus_tag="QEL58_003344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004132929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677779.1"
                     /translation="MPGLLKTLFLSIVALIGGVLSLALVSSVASWLPPLLGLSPDNNS
                     VQLGWDLAFSVLGGVAGISFATYYAPCWPRSHGFSIWSLIALGCGYAVWSVGADFPLW
                     FVVSLLVSLPLQLLVGWWFGRRASRDPG"
     gene            complement(520..1548)
                     /gene="adhP"
                     /locus_tag="QEL58_003345"
     CDS             complement(520..1548)
                     /gene="adhP"
                     /locus_tag="QEL58_003345"
                     /EC_number="1.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010487377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase AdhP"
                     /protein_id="HDS1677780.1"
                     /translation="MNPTMKAAVVREFGKPLVIEEVSVPRPGAGEVLVRIEACGVCHT
                     DLHAAEGDWPVKPNPPFIPGHEGVGHVVAVGGGVGHVREGDRVGIPWLYSACGHCEHC
                     LGGWETLCETQRNTGYSVNGGFAEYALADANYVGLLPKEVGFVEIAPVLCAGVTVYKG
                     LKVTDTRPGDWVVISGIGGLGHMAVQYARAMGLNVAAVDVDDNKLALARQLGAQVTVN
                     ARTTDPAAYLKKEIGGAHGALVTAVSPKAFEQALGMVRRGGTVSLNGLPPGNFPLDIF
                     GMVLNGITVRGSIVGTRLDLQESLQFAAEGKVAATVSTDRLENINDVFARMHAGTIEG
                     RVVLDFAA"
     gene            complement(1645..2283)
                     /gene="eda"
                     /locus_tag="QEL58_003346"
     CDS             complement(1645..2283)
                     /gene="eda"
                     /locus_tag="QEL58_003346"
                     /EC_number="4.1.2.14"
                     /EC_number="4.1.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010487375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 4-hydroxy-2-oxoglutarate
                     aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase"
                     /protein_id="HDS1677781.1"
                     /translation="MSSTDPRLRALLKLAPVIPVYTPEDVNEAVNVAQALFRGGLPVI
                     EVTLRTPQALDAIKAMVEAVPDAVIGAGTVLNAAQMQAARQAGARFAVSPGATPALYA
                     AARDADLPYLPGAATASDLILGLEHGHDTFKFFPAVQAGGAALLAAWHGPFADVRFCP
                     TGGISAQTAPQFLHLPNVLCVGGSWLTTPALLQTRDWDAIERLAREASVLAS"
     gene            complement(2401..2991)
                     /locus_tag="QEL58_003347"
     CDS             complement(2401..2991)
                     /locus_tag="QEL58_003347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014645425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine dioxygenase family protein"
                     /protein_id="HDS1677782.1"
                     /translation="MDLQTSPFPPFRGRDRLIAAVDAAMTSGEAERITADLQLALQEA
                     IADSRIELPECVHRPVSDHYARRPLYHSREHGYSVIAMSWGPGQGTPLHDHDAMWCVE
                     GVWLGELEITRYELLECAGERWRFRRHAALRGGCGSAGSLIPPHEYHTLRNASDQSLA
                     ISVHVYEAPMERSAVFDPLGGDWYQRRIQALQADPA"
     gene            3230..4285
                     /locus_tag="QEL58_003348"
     CDS             3230..4285
                     /locus_tag="QEL58_003348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012478676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HDS1677783.1"
                     /translation="MSVRIISDAALPASKGKAATINDIARLSGVSKKTVSRIINNSPL
                     VRKDTRDKVEALMREVGYVPDPLARGLAFRRSFLIGLVYDDPGAQCIVDLQHGALEAL
                     RGTGYELVVHPCDSEDPECAQGVRRFVQQQKLHGVILGPRASESAALAQVLDEIDCRY
                     VRINAHVSDDEAQAVVTHDRDGAAAAAGYLLSLGHRDIAVIAGPGDRRAARERTHGFL
                     DRLAQVGLTLPGERVLEAGDTFESGVHAAERLLMGEGRPSAIFAGNDEMAAGVYQVAL
                     RAGIAVPQQLSIVSYDDSPLASRLWPPLTSVRRHVSDIGRMAAAMLVQTGVPEAPTAA
                     SVHPQLMVRGSCRAVDA"
     gene            complement(4391..5284)
                     /locus_tag="QEL58_003349"
     CDS             complement(4391..5284)
                     /locus_tag="QEL58_003349"
                     /EC_number="1.14.16.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019301672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine 4-monooxygenase"
                     /protein_id="HDS1677784.1"
                     /translation="MDLAQPRRVEHQQTDKGYVPVYTTSLVEQPWDTYSADDHATWST
                     LYQRQRELLVGRACQEFLDAQDEMGMSAHMIPRFDQLNEVLGAATGWTLVGVEGLLPE
                     LDFFDHLANRRFPVTWWIRRPDQIDYIAEPDLFHDLFGHVPLLMNPVFADYMEAYGRG
                     GVKAHAIGPDALQNLTRLYWYTVEFGLIDTPDGLRIYGAGIVSSKGESLYSLESAAPN
                     RIGFDLQRIMRTKYRIDTFQKTYFVIDSFEQLMQATSPDFTPIYAALADQAHLPAGDV
                     QDDDRVFQKGTGEGWADGGDV"
     gene            5410..5895
                     /locus_tag="QEL58_003350"
     CDS             5410..5895
                     /locus_tag="QEL58_003350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008267464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC family transcriptional regulator"
                     /protein_id="HDS1677785.1"
                     /translation="MAGEVQFDRTDIRLLAEIQRDGRATNAELATRVNLSPSACLRRL
                     QRLESEGVIVGYGARLEPRQLRLGLQAFVRVQLEKHDQAAIGHFVDSVQGWDEVVACH
                     ALTGDMDYLLHVYVRDLEHFSHFLLDRLLNAGGVADANSSFVLRTVKGFQALPLSQLE
                     S"
     gene            complement(5935..6927)
                     /locus_tag="QEL58_003351"
     CDS             complement(5935..6927)
                     /locus_tag="QEL58_003351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019658835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HDS1677786.1"
                     /translation="MSLFRPRMLLSVALIGLLAGCGGDPVRPTPPPAPTVVAQAKPVK
                     IGIALGGGAAKGFAHIGVIKMLEANGFEPVVVSGTSAGSVVGALYASGMDAFQMQSKA
                     VALDEASIRDVRLFSGGLVQGQKLQDYVNEQVANRPAERLKKPFAAVATQLETGERAI
                     FVRGNVGQAVRASSSIPGVFEPVKIGGHNYIDGGVVSPVPVDAARQLGADFVIAVDIS
                     SKASGKAPTGMLGIVNQSISIMGQRLGEQELARADIVIRPKVLDIGAADFSQRGTAIL
                     EGEKAAMAAMPQIRAKIQQLQKARAAAAAPAPVAAPKCEEASRLGKLMGRKDKC"
BASE COUNT         1143 a         2353 c         2380 g         1142 t
ORIGIN      
        1 cagcccggat cgcgcgacgc gcggcgaccg aaccaccagc ccaccagcag ctgcagcggc
       61 agcgagacca gcagggaaac gacgaaccac agcgggaaat ccgcgcccac gctccacacc
      121 gcgtagccgc agcccagcgc gatcagcgac cagatcgaga agccatgcga acgcggccag
      181 cagggtgcgt agtaggtggc gaaggaaatg ccggcgacgc caccgagcac gctgaacgcc
      241 aggtcccagc ccagctgcac gctgttgttg tccggcgaca ggcccagcag tggtggcagc
      301 cagctggcga cgctgctgac cagcgcgagc gacagcacgc cgccgatcag ggcgacgatg
      361 gacaggaaca gggtcttgag caggccgggc atgcgcgcat tgtacggctg cgcgaagcgc
      421 ctgcggttgc cggccagcag ccggcgctac cggtggatcg gcatggccgc cgtgcccgtg
      481 ggagaggggt acggtgcaac ggcggccatg cacaggcggt caggcggcga agtcgagcac
      541 cacgcggcct tcgatggtgc ccgcgtgcat gcgcgcgaac acgtcgttga tgttttccag
      601 gcgatcggtg ctgaccgtgg cggcgacctt gccctcggcg gcaaactgca gcgactcctg
      661 caggtccagt cgggtgccga cgatcgagcc acgcacggtg atgccgttga gcaccatgcc
      721 gaagatgtcc agcgggaagt tgcccggcgg caaaccattg agcgagacgg taccgccacg
      781 gcggaccatg cccagcgcct gctcgaatgc cttcggcgat accgccgtga ccagcgcacc
      841 gtgtgcgccg ccgatctcct tcttcaggta ggcggccgga tcggtggtgc gcgcgttgac
      901 ggtgacctgg gcacccagct gccgcgccag tgccagcttg ttgtcgtcca cgtccaccgc
      961 ggccacgttc aggcccatcg cacgggcgta ctgcacggcc atgtggccga ggccgccgat
     1021 gccggagatc accacccagt caccgggcct ggtgtcggtg accttcagcc ccttgtagac
     1081 ggtcacgccg gcgcacagta ctggcgcgat ctcgacaaag cccacttcct tcggaagcag
     1141 gccgacatag ttggcatcgg ccagtgcgta ctcggcgaag ccgccgttga ccgagtaacc
     1201 ggtgttgcgc tgcgtctcgc acagcgtctc ccagccaccc aggcagtgtt cgcaatggcc
     1261 acacgccgag tacaaccagg ggatgccgac cctgtcgcct tccctgacgt gccctacccc
     1321 gcctcccacg gccacgacgt gccccacgcc ctcgtggccg gggatgaatg gcgggttcgg
     1381 tttcaccggc cagtcgccct cggcggcgtg caggtcggtg tggcagacgc cacaggcctc
     1441 gatcctgacc agtacctcgc ccgcccccgg gcgcggtacc gagacttcct cgatcaccag
     1501 tggtttgccg aactcacgca cgacagcggc cttcatggtt ggattcatgt ccggatctcc
     1561 gtagtgcgct tgcccacaga atgacgccgg cccggggccg gcgctttgat cacgatcaaa
     1621 cctttgaaga ttcgtgccgc tggttcagct ggccagcacc gaggcctcgc gggccaggcg
     1681 ctcgatggcg tcccagtcac gggtctgcag cagcgccggc gtggtcagcc acgaaccgcc
     1741 cacgcacagc acgttgggca ggtgcaggaa ctgcggcgcg gtctgcgcgc tgatgccgcc
     1801 ggtcgggcag aagcgcacgt cggcgaacgg gccgtgccag gccgccagca gcgcggcacc
     1861 gccggcctgc accgccggga agaacttgaa ggtgtcgtgg ccgtgctcca ggcccaggat
     1921 caggtccgag gccgtggcag cgccaggcag gtacggcagg tcggcatcac gcgccgcggc
     1981 atacagcgcc ggcgtggcac ccggcgatac cgcgaaacgc gcgccggcct gcctggccgc
     2041 ctgcatctgc gcggcgttga gcacggtgcc ggcaccgatc accgcatccg gcacggcctc
     2101 gaccatcgcc ttgatggcat ccagtgcctg cggcgtgcgc agggtcacct cgatcaccgg
     2161 caggccgccg cggaacagcg cctgggccac gttgaccgct tcattcacat cttcgggggt
     2221 gtacaccgga atcaccggtg ccagcttcag cagcgcgcgc aggcgcggat cagtgctgga
     2281 catggtcttg ctccttgccc gacggggcat cgcggatcgc tgccgggccc ggcagctcag
     2341 cggcgcatga tgccacgtgg atcgcgaagg tgctgcagcg cgccgtgctg cgcgctggtt
     2401 tcaggccggg tcggcctgca atgcctggat gcggcgctga taccagtcgc cgccgagcgg
     2461 gtcgaatacg gcagatcgct ccatcggtgc ctcgtacacg tgcaccgaga tcgccagtga
     2521 ctggtcgctg gcattgcgca gggtgtggta ctcgtgcggc ggaatcaggc tgccggcact
     2581 gccgcagccc ccgcgcagcg ccgcgtggcg acggaagcgc caacgctcgc cggcgcattc
     2641 cagcagttca tagcgggtga tctccagctc gcccaaccac acgccctcca cacaccacat
     2701 ggcatcgtgg tcgtgcagcg gcgtgccctg ccctgggccc cagctcatgg caatcacgct
     2761 gtagccgtgt tcgcggctgt ggtacagcgg gcgtcgagcg taatgatcac tgaccggacg
     2821 gtgcacgcac tcgggcaatt cgatgcggct gtccgcgatg gcttcctgca gcgccagctg
     2881 caggtcggcg gtgatgcgtt cggcctcacc ggaggtcatc gccgcatcga ctgcggcgat
     2941 caaccggtcg cggccacgga acggcggaaa cggagaagtc tgcaggtcca tgccccgaat
     3001 gtagcggagc atggttaagg gaatgttggc gttggcacgc gtcgcgcccg cattgatgac
     3061 acgagcgcgt gaaaaacggt tcagatgcga aatgggtaga acgatcacaa tggaaccctg
     3121 tgcagcatgc gtggtcgaac aggacgcgtt ccccatccgc tgcgacactc cgcaacttcg
     3181 cgcccgacgg gcgcaaggct agagttttcc gacttacctg gttctataca tgtcagtgcg
     3241 aattattagc gatgccgcgt tgccggcatc gaagggcaag gctgccacga tcaacgacat
     3301 cgcacgactg tcgggagttt ccaagaaaac ggtttcaaga atcatcaaca actcgccgct
     3361 ggtgcgcaag gacacccgcg acaaggtcga ggcgttgatg cgcgaggtcg gttacgtgcc
     3421 cgaccccctg gcgcgcggac tcgcgttccg ccgctccttc ctgatcggcc tggtgtatga
     3481 cgacccgggc gcccaatgca tcgtggacct gcagcatggc gcgctggaag cgctgcgcgg
     3541 caccggctac gagctggtgg tgcatccgtg cgacagcgag gatccagagt gcgcacaggg
     3601 cgtgcgtcgc ttcgtgcagc agcagaagct gcatggcgtg atccttggcc cacgcgcgtc
     3661 cgagtcggct gcattggcgc aggtgctgga cgagatcgac tgccgctacg tccgcatcaa
     3721 cgcgcatgtg tccgatgatg aggcgcaggc cgtggtcacc catgatcgcg atggcgctgc
     3781 cgccgcagcg ggttacctgc tttcgctcgg ccaccgcgac atcgcggtga tcgccggccc
     3841 cggtgaccgc cgcgctgcac gcgaacgtac ccatggcttc ctcgatcggc tcgcccaggt
     3901 aggcctgacc ctgcccggtg agcgtgtgct ggaagcgggc gacaccttcg aatccggcgt
     3961 gcatgccgcc gaacgactgc tgatgggcga aggcaggccc agtgcgatct tcgccggcaa
     4021 cgacgagatg gccgctggcg tttaccaggt ggccctgcgt gcgggcatcg cggtgccgca
     4081 gcagctgtcg atcgtcagct acgacgacag cccgctggca tcgcggttgt ggccaccgct
     4141 gacctcggtg cgccgccacg tctccgatat cggccgcatg gccgcggcga tgctggtgca
     4201 gaccggcgta ccggaggcgc cgaccgcggc cagcgtgcat ccgcagctga tggtgcgtgg
     4261 ttcctgccgg gccgtggacg cctgagtgcc ctgccctggc ctgcagcgct gaagcggcgc
     4321 gggccgccat caatggaaac ggcgcacccg agtgcgccgt ttccagtgca acaccgtgtg
     4381 cgtgatgcgc ttacacgtca ccgccgtcgg cccagccttc gccggtgccc ttctggaaca
     4441 cgcggtcgtc gtcctgcaca tcaccggccg gcaggtgggc ctggtcggcc agtgccgcgt
     4501 agatcggggt gaagtccggc gacgtcgcct gcatcagctg ttcgaagctg tcgatgacga
     4561 agtaggtctt ctggaaagtg tcgatgcggt acttggtgcg catgatccgc tgcaggtcga
     4621 agccgatgcg gttgggcgcg gccgattcca gcgagtacag cgattcaccc ttcgacgaca
     4681 cgatgccggc accgtagatg cgcaggccgt cgggcgtgtc gatcaggccg aattccaccg
     4741 tgtaccagta caggcgggtc aggttctgca gcgcatccgg gccgatggcg tgagctttga
     4801 cgccaccgcg gccgtaggcc tccatgtagt cggcgaacac cgggttcatc agcagcggca
     4861 cgtggccgaa cagatcgtgg aacaggtccg gctcggcgat gtagtcgatc tggtccgggc
     4921 gacggatcca ccaggtcacc gggaaacgac ggtttgccag gtggtcgaag aaatccagtt
     4981 ccggcagcag gccttcgacg ccgaccaggg tccagccggt ggcggcgccg agcacttcgt
     5041 tgagctggtc gaagcgcgga atcatgtgcg cgctcatgcc catctcgtcc tgcgcatcta
     5101 ggaactcctg gcaggcccgg ccgaccagca gctcgcgctg gcgctggtac agcgtgctcc
     5161 aggtggcgtg gtcgtcggcg ctgtaggtgt cccacggctg ctcgacgagc gaggtggtgt
     5221 acaccggcac gtagcccttg tcggtctgct ggtgttcgac gcggcggggc tgggcgagat
     5281 ccatgggacg ctccttgagg ggatacccac gatgctaggg caggcggcgc gcaacagggt
     5341 tgcaaaagtt gcgtcgattg gccttgttgg cgcaatatcc ttgcgtactc accatgttgc
     5401 ggggcaacaa tggccggaga agtccagttc gatcgcacgg atatacgtct gctggccgaa
     5461 atccagcggg atgggcgcgc caccaacgcc gaactggcga cgcgggtgaa cctctccccc
     5521 tcggcctgcc tgcgccgcct gcagcggctg gaaagcgagg gcgtgatcgt cggttatggc
     5581 gcgcggctgg agccacggca gctacgcctg ggcctgcagg ccttcgtgcg ggtgcagctg
     5641 gaaaaacacg accaggctgc catcggccac ttcgtggaca gcgtgcaggg ttgggatgaa
     5701 gtggtggcct gccatgcgct gaccggcgac atggactatc tgctgcatgt ctacgtgcgc
     5761 gacctggaac acttctcgca cttcctgctg gaccggctgc tcaacgccgg gggcgtggcc
     5821 gatgccaatt ccagcttcgt gctgcgcacg gtcaagggct tccaggcact gccgctgtcg
     5881 cagctggagt cctgagcggc caccgggcgt gcccggtggc caggcatcaa ccgatcagca
     5941 cttgtccttg cgtcccatca gcttgcccag gcgcgaggct tcctcgcact tcggcgccgc
     6001 caccggcgcg ggtgcggctg ccgcagcacg tgccttctgc agctgctgga tcttcgcgcg
     6061 gatctgcggc atcgccgcca tcgcggcctt ctcgccctcc aggatcgcgg tgccgcgctg
     6121 gctgaaatcg gcagcgccga tgtccagtac cttcggccgg atcacgatgt cggcgcgcgc
     6181 cagttcctgc tcgcccaggc gctggcccat gatcgagatc gactggttga cgatgccgag
     6241 catgccggtg ggcgccttgc cactggcctt gctggagatg tctactgcga tcacgaagtc
     6301 ggcaccgagc tggcgcgcgg catccaccgg caccgggctg accacgccgc catcgatgta
     6361 gttgtggcca ccgatcttca ccggctcgaa cacgccgggg atgctgctcg acgctcgcac
     6421 ggcctggccg acgttgccgc gcacgaagat cgcgcgctcg ccggtttcca gctgcgtggc
     6481 gacggcggcg aacggcttct tcaggcgttc ggccgggcgg ttggccacct gttcgttgac
     6541 gtagtcctgc agcttctggc cctgcaccag gccgccggag aacaggcgca cgtcacggat
     6601 gctggcttcg tccagcgcca ccgccttgct ctgcatctgg aacgcgtcca tgccgctggc
     6661 atacagcgcg ccgaccacac tgccagcgct ggtgccggac accaccaccg gttcaaagcc
     6721 gttggcttcc agcatcttga tcacgccgat gtgggcgaag cccttggctg cgccgccacc
     6781 cagcgcgatg ccgatcttca ccggcttggc ctgcgccacc acggtcggtg ccggcggcgg
     6841 cgtgggacgg accggatcgc cgccgcagcc ggccagcagg ccgatcaggg cgacggacag
     6901 cagcatgcgg gggcggaaca ggctcatcgg caatgcgctc gcggcgccgg attctggaaa
     6961 gggcgccagc ataccgaagc gctggcgggg cgggcagggt ggggagcctc gcccattc
//
LOCUS       DAOKIP010000200         6993 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.201,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000200 DAOKIP010000000
VERSION     DAOKIP010000200.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 6993)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6993)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6993
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.201"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(73..1017)
                     /locus_tag="QEL58_003352"
     CDS             complement(73..1017)
                     /locus_tag="QEL58_003352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012480531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FecR domain-containing protein"
                     /protein_id="HDS1677787.1"
                     /translation="MSSALASPALEQAAEWFALRQQGWSDGDQQRWRAWLHADAGHAD
                     AWQRVESVWQSFAPLSAPAAARALDAAGRRRRQALRGLGGALGLGAFSLLGLHAVQLQ
                     RGLQTQRTAAGHTGHWTLADGSRLWLNADSEVSIDIGNGRRNLHLLRGELLLQTGHLP
                     AFAHLPLSVHVPGARLQPIGTRFAVGREPQGSRLDVFEGAVRCLPLFGAVQDVPAGGA
                     MRIGPMGGLSAVDTDPLRGDWQDGRLQVQDVPLIRVIDELARHHRGYLGCDPALAALN
                     VTAVLPRLDSLQALQLLVRALPIRIEQRWPWWTVMRPH"
     gene            complement(1014..1532)
                     /locus_tag="QEL58_003353"
     CDS             complement(1014..1532)
                     /locus_tag="QEL58_003353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HDS1677788.1"
                     /translation="MAVPAASSTALAGFYREHHGWLLGWLRRRTHNADCAADLTQDTF
                     LRLLSRRVDPAELRLPRAYLSTIAHALLVNHWQRADLERAYLAALAAQPEPVHPSAEE
                     RTQALQLLHAIADMLSGLAERPRRAFLLARLSGLGYAEIGQQLGVSERMVKKYMAQAM
                     LHCLRLSGDATA"
     gene            1682..2062
                     /locus_tag="QEL58_003354"
     CDS             1682..2062
                     /locus_tag="QEL58_003354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014647442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HDS1677789.1"
                     /translation="MFSHITVGTNDMEAAHRFYEALFTALGARPGVFDDKGRLVYFKD
                     GRMFIVTAPIDGEPACHANGGTIGFTLDSAEAVRGWQDAGVAHGGTAIEDPAGIRNMA
                     GRQLFLAYLRDPDGNKLCAVHVMS"
     gene            2209..4188
                     /gene="betT"
                     /locus_tag="QEL58_003355"
     CDS             2209..4188
                     /gene="betT"
                     /locus_tag="QEL58_003355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006451628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="choline BCCT transporter BetT"
                     /protein_id="HDS1677790.1"
                     /translation="MEALEPQQSPVRTLRPVFAFAAIVVVAFALFVSLFPLGAGRLLV
                     KAQDWAALNVGWYYLLAMTLYLVFVVGVALSKYGGIKLGADHDEPEFSYLSWAGMLFA
                     AGISITLFFFCVSEPLTHYLQPPQGDPAAGEAGARQAMQLLFLHWGLHGWGVFALAAM
                     AMAYFAYRHNLPLALRSALYPLIGKRINGPIGYTVDALGIVATVFGIGADMGFGVLHL
                     NAGLSHLFNIPHSNLVQIILVVSMMGAAVAVAVSGVEKGVRWMANINMLLAIALVLFM
                     LCAGPTQYLLSTLMQNLGDYLGSVVGKSFDVYAYGGRPEWLGGWTVFYWAWWIGWAPF
                     VGLFIARISRGRTIREFVFGVLLIPLGFTLAWLSIFGNSALDQVLHHGQQQLAQLAVD
                     DPPTVLYALLDGYPWSRTVIAVTVLVSFIFFVTSADSGAVVLSTLSSHGGAPEDDGPR
                     WLRVFWGTVIAVLTAGLLLAGSIDALKSAVVLASLPFSAVLLLMMWGLTRAFSDESHR
                     KRALQYRPSPLIGDDRHHQGWRQRLSQAMHFPVRDQVYRFMDDTVKPAMEAVAEQLRG
                     QGWDVTTRFEAGDMELSVNHGEQQDFLYRVILSGYLTPSFAAQQLRNQRYYRAEVHLF
                     EGSQDYDLVGYSRKQIINDIISQYERHLQFLHLSR"
     gene            complement(4246..6870)
                     /locus_tag="QEL58_003356"
     CDS             complement(4246..6870)
                     /locus_tag="QEL58_003356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDS1677791.1"
                     /translation="MYRTTLNLLAGAIALGLSAGTAGAAETADTGKDSTTLGAVLVTG
                     SNIKRSDTAGPNPVQIVSREQIEQTGRSTLTDVLRNLSANAGNSFDEQYTGSFAAGSA
                     SIGLRGLSPKNTLVLVNGYRVSNFGFALNTQDTFVDLNALPISAVERIEVLKDGASAV
                     YGSDAIAGVINIILRKNFQGVEVGGGFGTATQGGLNERKANLLAGFGDLEQQGWNVLF
                     GLDLLKRDRLDADQRAYTRSGDFRDKPGGRLAGWSTAGGNWLSNPRAPQPFANCPDGS
                     QLRPYSDFGSTLPGQACAFNAQPFKTLQPGAERLQASLSATYRFNDSVEAFADVLYSH
                     NKADQIFSAPLTVGPGLRAYNPATGTLIDVPAVLPVGHPNNPGNSPLPFEYTFFDLGP
                     RLKDNTQVFYRALAGVRGSGERWDWEVAALTSQSAQREYVDNFVNRYAFEQILRDGSY
                     NFLNPSSTPGTLDALRLQTKRPGWYKLHALNVKASTTLWELPAGAVGFAWGAEFRKES
                     LDARTSAQVLSGTELRPAINVVNGERQVSAAYAELSVPLHRTLELQLAGRGDRYDDFG
                     KAFSPKVALRWQPLDSLLLRGSFSRGFRAPSLPEIAPGQTVSYGSVIDPFDPLQPGGS
                     RGVTNIRTGNPDLKAERSRNFNVGAVWSPDGDTSIGLDWYRIEQDNLVKPDSAQFIVD
                     NPTLFPGRVQRENGRIQFITNQYANQGELTTSGLDLDASRTFRTDGWGNFTLAGSWTH
                     LLSFKQPLVAGQAPYDGAGNNRHGALPRTRGTTSLNWAVGDWSSTLSLQYVSGYDQRV
                     ATATSNPGLRDRIKPYHQLDLYVAYEGIANTTLSLSVLNLTDKDPPFDPAGGSSGFDI
                     SQYNLRGQFVSLGARYRF"
BASE COUNT         1100 a         2253 c         2426 g         1214 t
ORIGIN      
        1 catgggggcg gcaacatccg caatgggttc ccttgctagg cccggtgagg gcgcagaaag
       61 ggaaccgctg tttcaatgcg gacgcatgac ggtccaccac ggccagcgct gctcgatgcg
      121 gatcggcagg gcccggacca acagttgcag ggcctgcagg ctgtccaggc gtggcagtac
      181 ggcggtgacg ttcaatgcgg cgagcgccgg atcacacccg aggtaaccgc gatggtggcg
      241 ggccagctca tcgatgacgc ggatcagggg cacgtcctgc acctgcagtc ggccatcctg
      301 ccagtcgcca cgcagcggat cggtatcgac tgccgacagt ccgcccattg gaccgatccg
      361 catcgccccg cctgcgggta cgtcctgcac cgcgccgaac agcggcaggc agcgcaccgc
      421 gccctcgaac acatccaggc ggctgccctg cggctcacgg ccgaccgcga agcgggtgcc
      481 gatcggctgc aggcgcgcgc ccggtacatg caccgacagc ggcagatggg caaatgcggg
      541 cagatgcccg gtctgcagca gcagttcgcc gcgcagcaga tgcaggttgc ggcggccgtt
      601 gccgatgtcg atcgacactt cactgtcggc gttgagccac agccggctgc catcggccag
      661 ggtccagtgg cctgtgtgtc cggcggcggt gcgctgcgtc tgcaggccgc gctgcagctg
      721 cacggcgtgc agaccgagca acgagaaggc gccaaggccg agggcgccgc cgaggccgcg
      781 cagtgcctgc cggcggcgac ggccagcagc atccagcgcc ctcgctgccg cgggagccga
      841 caacggcgcg aacgactgcc agaccgactc gacccgctgc caggcatcgg cgtggccggc
      901 atcggcgtgc agccatgcgc gccagcgctg ctggtcgccg tcactccagc cctgctggcg
      961 cagcgcgaac cactccgcgg cctgttccag cgccgggctg gcgagcgcgc tgctcatgcc
     1021 gtggcgtcgc cggacaagcg caggcaatgc agcatcgcct gcgccatgta cttcttgacc
     1081 atccgctcgg acacgcccag ctgctggccg atctccgcat agccgagtcc ggacagtcgt
     1141 gccagcagga aggcgcgccg cggtcgctcg gccaggccgg acagcatgtc ggcgatggca
     1201 tgcagcagct gcaatgcctg cgtgcgttcc tccgcagacg ggtgcaccgg ctccggttgc
     1261 gcggccagcg cggccagata ggcacgctcc aggtcggcgc gctgccagtg gttgaccagc
     1321 agcgcgtgcg cgatggtgct gaggtaggca cgcggcaggc gcagctcggc cggatcgacg
     1381 cgacggctga gcaggcgcag gaaggtgtcc tgggtcaggt cggcagcgca atcggcgttg
     1441 tgggtgcggc ggcgcagcca gcccagcagc caaccatggt gttcgcggta gaaccccgcc
     1501 agcgcagtgc tggaggcggc gggcacggcc atcggcatcg atcattaatg agaatgattc
     1561 ccattataga atgatcgtgt gtcactcgac aaacggtgcg ctgccagggc gcgaggaagg
     1621 tggatttgcg atgcgcccct gcgctcgccg acactgcggt ctttccacaa ggagtgcccg
     1681 catgttcagc cacatcaccg ttggaacgaa cgacatggag gccgcgcacc gcttctatga
     1741 ggccctgttc accgccctgg gtgcgcgccc gggggtgttc gacgacaagg gtcgcctggt
     1801 gtacttcaag gacggccgga tgttcatcgt caccgccccc atcgacggcg agccggcgtg
     1861 ccatgccaac ggcggcacca tcggcttcac cctggacagt gccgaggccg tgcgcggctg
     1921 gcaggacgcc ggcgtggccc atggcggcac cgccatcgaa gacccggccg gcatccgcaa
     1981 catggccggc cgccagttgt tcctggccta cctgcgcgac ccggatggca acaagctgtg
     2041 cgcggtgcat gtgatgtcgt gatgcaaggc gcgcacagcg gcgcgcgcgc gatagcacga
     2101 aagcgcgcgc gcgggccgtg acccgcggcc gcgacttcat gctctgtcca ctgcggttca
     2161 gccagaatcg gtcggctaat cctttgatct gccggagaac gccgccccat ggaagccctg
     2221 gagccgcaac aatccccggt gcgcaccctt cggcctgtgt tcgccttcgc ggcgatcgtt
     2281 gtcgtggcgt tcgcgctgtt cgtcagcctg tttccgctgg gtgcgggccg cctgctggtc
     2341 aaggcccagg actgggccgc gctcaatgtc ggctggtact acctgctggc gatgaccttg
     2401 tacctggtat tcgtggtcgg cgtggcgctt tccaagtatg gcggcatcaa gcttggtgcc
     2461 gaccatgacg agccggagtt cagctatctg tcctgggccg gcatgctgtt cgccgcgggc
     2521 atcagcatca ccctgttctt cttctgcgtg tctgaaccac tgacccatta cctgcagccg
     2581 ccgcagggcg accccgcagc gggtgaggcc ggtgcgcgcc aggccatgca gctgctgttc
     2641 ctgcattggg gcctgcatgg ctggggcgtg tttgcgctgg cggcaatggc gatggcctat
     2701 ttcgcctacc gccataacct gccgctggcg ctgcgttcgg cgctgtaccc gctgatcggc
     2761 aagcgcatca acggcccgat cggctacaca gtggatgcgc tgggcatcgt cgccaccgtg
     2821 ttcggcatcg gtgccgacat gggcttcggc gtactgcatc tcaacgccgg cctgtcgcat
     2881 ctgttcaaca tcccgcactc caacctggtg cagatcatcc tggtggtcag catgatgggc
     2941 gcagcggtgg ccgtggctgt ctccggggtg gagaagggcg tgcgctggat ggccaacatc
     3001 aacatgctgc tggcgatcgc gctggtgctg ttcatgctgt gcgccggccc cacgcaatac
     3061 ctgctcagca ccttgatgca gaacctgggc gactacctgg gcagcgtggt cggcaagagc
     3121 ttcgacgtgt atgcctatgg cggccgcccg gagtggctgg gtggctggac ggtgttctac
     3181 tgggcctggt ggatcggctg ggcgccgttc gtcggcctgt tcatcgcgcg catctcgcgt
     3241 ggccgcacca tccgcgaatt cgtgttcggc gtgttgctga taccgctcgg tttcaccctg
     3301 gcatggctgt cgatcttcgg caacagcgcg ctggaccagg tgctgcacca cggccagcaa
     3361 cagctggcgc agctggccgt ggatgatcca ccgacggtgc tgtatgcgct gctggatggc
     3421 tacccatgga gccgcacggt gattgcggtg acggtgctgg tcagcttcat cttcttcgtc
     3481 acttcggccg actcgggggc agtagtgctg tccacgctgt cctcgcatgg cggtgcgccg
     3541 gaggatgacg gcccgcgctg gctgcgtgtg ttctggggca cggtgatcgc ggtgctgacc
     3601 gccggcctgc tgctggccgg cagtatcgat gcgctgaaat cggcggtggt gctggcgtcg
     3661 ctgccgttct cggcggtgct gttgctgatg atgtggggcc tgacccgcgc cttcagtgac
     3721 gaatcgcatc gcaagcgcgc gctgcagtac cggccatcgc cgctgatcgg cgatgaccgc
     3781 caccaccagg gctggcgcca gcgcctgagc caggcgatgc actttccggt gcgcgatcag
     3841 gtctaccgct tcatggacga cacggtgaag ccggcgatgg aagcggtggc cgagcagctg
     3901 cgcgggcagg gctgggacgt gaccacccgc ttcgaagcgg gtgacatgga gctgtcggtc
     3961 aaccacggcg aacagcagga cttcctgtac cgggtgatcc tcagcggcta cctgacgccg
     4021 tcgttcgctg cgcagcagct gcgcaaccag cgctactacc gcgctgaagt gcacctgttc
     4081 gaaggcagcc aggactacga cctggtcggc tacagccgca agcagatcat caacgacatc
     4141 atcagtcagt acgaacggca cctgcagttc ctgcacctga gccgttgatg cacgaccgct
     4201 gtggtgggtg cggaccgttg gtccgcacac ccttgtagag ccgcatcaga accggtagcg
     4261 cgcccccagc gagacgaact gcccgcgcag gttgtactgg ctgatgtcga agccgctgga
     4321 gccgccagcc gggtcgaacg gcgggtcctt gtcggtcagg ttcagtaccg acagcgacaa
     4381 cgtggtgttg gcaatgcctt cgtacgccac gtaaagatcc agctggtgat acggcttgat
     4441 gcggtcgcgc agccccggat tgctggtggc cgtcgccaca cgctggtcgt agccactcac
     4501 atactgcagg ctcagcgtgc tgctccagtc gcccaccgcc cagttcaacg acgtggtgcc
     4561 gcgggtgcgc ggcagtgcgc cgtggcggtt gttgccggcc ccgtcatagg gcgcctggcc
     4621 ggccaccagc ggctgcttga agctgagcag gtgggtccag ctgccggcga gggtgaagtt
     4681 gccccaaccg tcggtgcgga aggtgcggct ggcgtcgagg tccagccccg aggtggtcag
     4741 ttcgccctgg ttggcatact ggttggtgat gaactggatg cgtccgttct cgcgttgtac
     4801 gcggcccggg aacagggtcg ggttgtcgac gatgaactgc gcactgtcag gcttgaccag
     4861 gttgtcctgt tcgatgcggt accagtccag gccgatgctg gtatcgccat ccggcgacca
     4921 caccgcaccc acgttgaaat tgcgcgagcg ctcggccttc aggtccgggt tgccggtgcg
     4981 gatattggtc acgccgcggc tgccacccgg ttgcagtggg tcgaacggat cgatcaccga
     5041 gccgtagctg acggtctggc ccggcgcaat ctccggcagc gacggcgcgc ggaagccgcg
     5101 tgagaacgag ccgcgcagca gcaggctgtc cagcggctgc cagcgcagcg ccaccttcgg
     5161 cgaaaacgcc ttgccgaaat cgtcgtagcg gtcgccgcga ccggccagct gcagttccag
     5221 cgtgcggtgc agcggcacgc tcagttcggc gtaggcggca ctgacctggc gctcgccgtt
     5281 gaccacgttg atggccgggc gcagttcggt gcccgacagc acctgcgcac tggtacgcgc
     5341 atccagcgat tccttgcgga attcggcacc ccaggcgaag ccgaccgcac cggccggcag
     5401 ctcccacagc gtggtcgagg ccttcacgtt caacgcgtgc agcttgtacc agcccggacg
     5461 cttggtctgc aggcgcaggg catccagcgt gcccggcgtg ctggacgggt tgaggaagtt
     5521 gtagctgcca tcgcgcagga tctgctcgaa cgcgtagcgg ttgacgaagt tgtcgacata
     5581 ctcgcgctgt gcactctgcg aagtcagcgc ggccacttcc cagtcccagc gctcgccgct
     5641 gccgcggacg ccggccaggg cacggtagaa cacctgggtg ttgtccttca ggcgcgggcc
     5701 gaggtcgaag aaggtgtact cgaatggcaa cggcgagttg cccgggttgt tcgggtggcc
     5761 gaccggcagc accgccggca cgtcgatcag ggtgccggtg gccgggttgt aggcgcgcag
     5821 gccggggccg acggtgagcg gcgcgctgaa gatctggtcg gccttgttgt ggctgtacag
     5881 cacgtcggcg aatgcctcga cgctgtcatt gaagcggtag gtcgcactca acgacgcctg
     5941 caggcgctcc gcgccgggct gcagggtctt gaacggttgt gcgttgaagg cgcaggcctg
     6001 gccgggcagg gtgctgccga aatcgctgta cggccgcagc tggctgccat cggggcagtt
     6061 ggcgaacggc tgcggtgcgc gtgggttgga cagccagttg ccaccagcgg tggaccagcc
     6121 ggccaggcgg ccaccgggct tgtcgcggaa atcgccgctg cgggtgtagg cgcgctgatc
     6181 ggcgtcgagg cgatctcgct tgagcaggtc cagcccgaac agcacgttcc agccctgctg
     6241 ttcgaggtca ccgaagccgg ccagcaggtt ggccttgcgt tcgttcaagc cgccctgggt
     6301 agcagtaccg aaaccgccgc cgacctccac gccctggaag ttctttcgca ggatgatgtt
     6361 gatgacgccg gcgatggcat cggaaccgta caccgccgag gcaccgtcct tcagcacttc
     6421 gatgcgttcg accgcgctga tcggcagtgc gttgaggtcg acgaaggtat cctgcgtgtt
     6481 gagcgcgaaa ccgaagttgg acacgcgata gccgttgacc agcaccagcg tgttcttcgg
     6541 cgacaggcca cgcaggccga tcgaggccga gccggcggcg aagctgccgg tgtactgctc
     6601 atcgaagctg ttgccggcat tggccgacag gttgcgcagc acgtcggtga gggtggagcg
     6661 gccggtctgc tcgatctgtt cgcggctgac gatctgcacc gggttgggcc cggcggtatc
     6721 gctgcgcttg atgttggagc cggtcaccag cacggcgccg agggtggtgc tgtccttgcc
     6781 ggtgtcggca gtttcagcgg cgccggcagt cccggcggaa aggcccagcg cgatggcgcc
     6841 ggcaagcagg ttcagggtgg tgcggtacat ggaagcgaca acgccaaacg ggggaggagc
     6901 ctccagtacc gcacgcagct acatgcgcct tccaatgacg aaagcgcatt cagttataca
     6961 tcacaggttc ttaacgaaat gactgcttcc tgc
//
LOCUS       DAOKIP010000201         6987 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.202,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000201 DAOKIP010000000
VERSION     DAOKIP010000201.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 6987)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6987)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6987
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.202"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..1098)
                     /locus_tag="QEL58_003357"
     CDS             complement(<1..1098)
                     /locus_tag="QEL58_003357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005411914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDS1677792.1"
                     /translation="MTGETAAAVERRPHTVDPAAETRIQQGTPAFRRTALALFLAGFS
                     TFGLLYTVQPLLPEFSRHFGVSAAGSAMSLSLTTGTLAVAMLLAGLLSDAIGRRPLMI
                     AALLASAILSLCTALVDDWTTLLVLRTLLGLALSGVPAVAMTYLVEEMDSRALGLAMG
                     LYIGGNAIGGMSGRLLAGIIADHWGWRWGIGVVSIIAIASTVLLWLQLPPSRHFQARR
                     GGLRQLPSRWRALFGDPGLPWLFATSFVLMGVFVTLYNYLGYHLLAPPYHLSQTVVGL
                     IFSVYLVGTFSSAWMGQQATRYGRGRILSISFALIGAGIALLAMPWLSTMALGIALVT
                     FGFFGGHSVASSWVGSRAGTMRAEASALYLFA"
     gene            complement(1223..1849)
                     /gene="lepB"
                     /locus_tag="QEL58_003358"
     CDS             complement(1223..1849)
                     /gene="lepB"
                     /locus_tag="QEL58_003358"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014035578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HDS1677793.1"
                     /translation="MDAVARPPFSERALTWLKKEALPLLVMLGLLAAARDTLANHYVV
                     PSGSMQPTLQPGDRVVVDMRAYGLRLPFTGKELMATGSPQRGEVAVFDSPADGTRLIK
                     RVAAVAGDHVQLHEGHLSINGQPLQIADVQDVEAFGQRRARLDLDMGGGPDIADLVVP
                     AGKVLVLGDHRGNSFDGRFFGFVDADKLYGRAVAVYYRRGDGFEWQRL"
     gene            2032..2433
                     /locus_tag="QEL58_003359"
     CDS             2032..2433
                     /locus_tag="QEL58_003359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008267294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677794.1"
                     /translation="MTLLVIRHASPSAPRPQLPAQLSGHRVLCSDCASLSEVRQCLCQ
                     PQARSADWVLLDVGTADEAQWQAEGGALQAALERLPAQYIELQARSEPGLDARLRLQH
                     GPAAVVVDQRSQQAGYPLSLAIVGRRLAQEG"
     gene            2437..2883
                     /locus_tag="QEL58_003360"
     CDS             2437..2883
                     /locus_tag="QEL58_003360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007966506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydroquinate dehydratase"
                     /protein_id="HDS1677795.1"
                     /translation="MSIFIIRGPEAAGALIRTAMPLPAPVLKSLVHRAIDAGTSVAIR
                     ACGSEQELLDALRVADHSRGEVTLLDPGACANSLRLQRLLPYLHNAYVEVHDDGAVAE
                     PCLPAGVGQRLGIAAGYGAQSYVLALDIALDHLGLAEQANRVHVGT"
     gene            complement(3028..5184)
                     /gene="dcp"
                     /locus_tag="QEL58_003361"
     CDS             complement(3028..5184)
                     /gene="dcp"
                     /locus_tag="QEL58_003361"
                     /EC_number="3.4.15.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidyl-dipeptidase Dcp"
                     /protein_id="HDS1677796.1"
                     /translation="MSRTVVLAAAISLALAACSGKESTPVSEAQKTPAQQPAEASTNP
                     LLSASTLPFQAPQFDKIKDSDYLPAFEEGMRQHLAEVRKIADSSEPATFDNTIVAMER
                     SGETLTRVSRIFFGLVQADTNDARQKIQEEVAPKLAAHQDEINLDPKLFARVKSIYDQ
                     RDTLELDPVQKRLVEHYYDGLVRAGAQLSDADKASLRKLNVEETTLSTQFHTRLVAAT
                     AAAAVVVDDKAKLAGLDEDAINNAAAAAKDRKLDGKFVLPLQNTTQQPVLGSLSDRDQ
                     RAAVLKASETRAERGDANDTRQTVQRLAQLRAQKAKLLGFDTFADYQLGDQMAKTPAA
                     ALKLLTDTVPAATAKARAEAGEIQKVIDAQKGGFQVAASDWDFYAEQVRKAKYDLDES
                     QIKPYFELDNVLQNGVFYAATQLYGITFKPRTDIPTYNPDMKVYEVFDKDGTSLALFY
                     TDYFKRDSKSGGAWMDVFVEQDGLTGAKPVVYNVCNFTKPAAGQPALISFDDVTTMFH
                     EFGHALHGMFSNVKYPSIAGTATSRDFVEFPSQFNEHWALDPKVFANYAKHYKTGEAM
                     PQELVDKILKARSFNQGYATTEYLSAALLDLAWHTQKADAPLQDVGAFEASALKKFKV
                     DLPQVPPRYRTTYFDHIWGGGYSAGYYAYFWAEVLDHDAYQWFTEHGGLTAANGQEFR
                     DKILSRGNSVELSTLYRDFRGKDPSVEPLLKFRGLK"
     gene            complement(5296..5898)
                     /locus_tag="QEL58_003362"
     CDS             complement(5296..5898)
                     /locus_tag="QEL58_003362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005407645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HDS1677797.1"
                     /translation="MNNPTPLLPAVPPQMPQVKPNAFLRWLARCTLRMGGWKVTGTLP
                     DIPRLVFIIAPHSSNWDGLWGMAAKIALGMKVKVLGKASLFWWPLGPLLHKLGVIPLD
                     RSSPQGTVGQAVDLLRNNEKMWFAITPEGTRKAVKDWKAGFLKIARMADVPILAAYFH
                     YPEKTIGIGPLFTPSGDDAADMAAIREFYRPWIGKTRGTV"
     gene            complement(5903..6334)
                     /gene="arfB"
                     /locus_tag="QEL58_003363"
     CDS             complement(5903..6334)
                     /gene="arfB"
                     /locus_tag="QEL58_003363"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011257289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HDS1677798.1"
                     /translation="MGSGPVTISAQLEIPDGEIVERFVRASGAGGQNVNKVSTAVELR
                     FDVANSPSLPEPLRTRLLARRDRRMTGEGVLVIDAQRFRTQDRNREDARDRLAAFIQA
                     GLSVPKPRKATKPTLGSKLRRLDAKRGRAQIKRGRSSRDWE"
     gene            6468..>6987
                     /locus_tag="QEL58_003364"
     CDS             6468..>6987
                     /locus_tag="QEL58_003364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005407643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2059 domain-containing protein"
                     /protein_id="HDS1677799.1"
                     /translation="MTRTAPALPSLLRRAALLLALAVASVPALAAPPTDGDINRLLSA
                     SRAQSMIDTMLPQIEAMQQQQFQQVAAQRQLNAQQQEQLKRIQARTSQTLRQALSWQQ
                     LRPMYVDLYKKTFSKEDVLAMAEFYESAAGQSLLDKTPALMQNVMVAIQARMQPLFAD
                     LQKDLEAIVNEPE"
BASE COUNT         1133 a         2299 c         2415 g         1140 t
ORIGIN      
        1 ggcaaacagg tacagcgccg aggcttcggc gcgcatcgtg ccggcgcggc tgccaaccca
       61 gctgctggcc accgagtggc caccgaagaa gccgaacgtg accagtgcga tgcccagagc
      121 catcgtgctc agccacggca tcgccagcag tgcgatgccg gcgccgatca gtgcgaacga
      181 gatcgacagg atgcggccgc gcccgtagcg cgtggcctgc tggcccatcc acgccgaact
      241 gaaggtgccg accagataca cactgaagat cagcccgacc acggtctggc tgaggtggta
      301 cggcggtgcc agcaggtggt agcccaggta gttgtagagg gtgacgaaca cacccatcaa
      361 cacgaacgag gtggcgaaca gccacggcag gcccgggtcg ccgaacagcg cgcgccagcg
      421 cgacggcaac tggcgcaggc cgccgcgacg ggcctggaaa tgccgcgacg gcggcagctg
      481 cagccacagc agcacggtgc tggcgatggc aatgatcgag accacgccga tgccccagcg
      541 ccagccccag tggtcggcga tgatgccggc cagcaggcgg ccgctcatgc caccgatggc
      601 gttgccgccg atgtacaggc ccatcgccag gcccagtgcg cggctgtcca tttcctccac
      661 caggtaggtc atcgccaccg ccggtacgcc gctcagcgcc aggccgagca gggtgcgcag
      721 caccagcagc gtggtccagt cgtccaccag tgcggtgcac agcgacagga tggccgacgc
      781 gagcagcgcg gcgatcatca acgggcggcg gccgatcgca tcggacagca gcccggccag
      841 cagcatcgcc accgccagcg tgccggtggt cagcgacagc gacatcgcgc tgccggcagc
      901 ggagacgccg aaatgacggc tgaactcggg cagcagcggc tgcaccgtat acagcaggcc
      961 gaaggtggag aagccagcca ggaacagcgc cagcgcggta cgccggaagg cgggggtacc
     1021 ctgctggatg cgggtctcgg cagcagggtc gacagtgtgg gggcggcgtt cgacggccgc
     1081 cgcggtttcg ccagtcatgg gatcgatggg ccggtgggga cggccgggcg tgggagggaa
     1141 cgggccccag actaggcccg ttgatccagt cgatccataa cctgataggt catgattgat
     1201 acacaggaag tatcaattca gcttacagtc gctgccattc gaacccgtcg ccgcggcggt
     1261 agtacaccgc cacggcgcgg ccatacagtt tgtcggcgtc gacgaagccg aagaagcggc
     1321 cgtcaaagct gttgccgcgg tggtcaccca gcaccagcac cttgccggcc ggcaccacca
     1381 gatcggcgat gtccgggccg ccgcccatgt ccagatcgag gcgggcgcgg cgctggccga
     1441 aggcttccac gtcctgcaca tcggcgatct gcagcggctg gccgttgatg ctcagatggc
     1501 cttcatgcag ctgcacgtgg tcgccggcta ccgccgccac gcgcttgatc agacgggtgc
     1561 catcggccgg cgagtcgaac accgccactt cgccacgctg cgggctgccg gtcgccatca
     1621 gttccttgcc agtgaacggc aggcgcaggc cataggcgcg catgtccacc accacccggt
     1681 cgccaggctg cagggttggc tgcatcgagc cactgggcac cacgtagtgg ttggccaggg
     1741 tatcgcgggc ggcggccagc aggccgagca tcaccagcag cggcaatgct tccttcttca
     1801 gccaggtaag cgcgcgttcg gaaaagggag ggcgggcaac agcatccatg gcaggctccg
     1861 ggtggtcggt agcggtatca gaccacacgc aggcgtcgct ggttcccggc agcgcgggac
     1921 atgggttacg caggttttac gccccggccc ggcggcgggc atcgcacctt tacggccagc
     1981 gcgcgcatcg tgtgcccacc gcgccacagg gcgcattccg caaggtgttg tatgaccctc
     2041 ctggtgatcc gccacgcatc tccgtcggcg ccgcgcccgc agctgccggc gcagttgagc
     2101 ggccatcgcg tgctgtgcag cgactgcgcc agcctgtcag aagtgcgcca gtgcctgtgc
     2161 cagccgcagg cgcgctcggc cgactgggtg ctgctggatg tcggcaccgc cgacgaggcg
     2221 cagtggcagg ccgaaggtgg cgcgctgcag gcggcactgg aacgactgcc ggcgcagtac
     2281 atcgagctgc aggcccgcag cgagccgggc ctggatgcac gcctgcgcct gcagcacggt
     2341 ccggccgcgg tggtggtcga ccagcgcagc cagcaggccg gttacccgtt gtcgctggcc
     2401 atcgttggcc gccgcctggc gcaggagggc tgagccatgt cgatcttcat catccgtggc
     2461 ccggaagcgg ccggtgcgct gatccgtacc gcgatgccgc tgccggcgcc ggtcctgaag
     2521 tcgctggtgc atcgcgcgat cgacgccggc accagcgtgg cgatccgcgc gtgtggttcg
     2581 gagcaggaac tgctggacgc gctgcgcgtg gccgaccaca gccgtggcga ggtgaccctg
     2641 ctcgatccgg gtgcgtgtgc caacagcctg cgcctgcagc ggctgctgcc gtacctgcac
     2701 aacgcctacg tggaagtgca tgacgacggc gcggtggccg aaccgtgcct gccggccggg
     2761 gttggccagc gcctgggcat cgccgcgggg tatggcgcgc agagctatgt gctggcgctg
     2821 gacatcgcgc tggatcacct gggattggcc gagcaggcga accgcgtgca cgtaggcacg
     2881 taacccgctt gtgtagagtc gagccatgct cgactggctt tcatcgaaag gcagccgagc
     2941 atggctcggc tctacagaag aacgtcgagc atggctcgac gctacacaac gaaaaacggc
     3001 ggggtttccc ccgccgtttt cgctttctta tttcagcccg cggaacttca gcagcggctc
     3061 caccgacggg tccttgccgc ggaaatcgcg gtacagggtc gacagctcca cgctgttgcc
     3121 acgcgagagg atcttgtcgc ggaactcctg gccgttggcg gcggtcaggc caccgtgctc
     3181 ggtgaaccac tggtaggcgt catggtcgag cacttcggcc cagaagtagg cgtagtaacc
     3241 ggccgagtaa ccgccacccc agatatggtc gaagtaggtg gtgcggtaac gcggcggcac
     3301 ctgcggcagg tcgaccttga acttcttcag cgcgctggct tcaaaggcac cgacatcctg
     3361 cagcggcgca tcggccttct gcgtgtgcca ggccaggtcc agcagtgcgg ccgacaggta
     3421 ctcggtggtc gcatagccct ggttgaagct gcgtgccttg aggatcttgt cgaccagttc
     3481 ctgcggcatc gcctcgccgg tcttgtagtg cttggcgtag ttggcgaaca ccttcgggtc
     3541 cagcgcccag tgctcgttga actgcgacgg gaactcgacg aaatcacgcg aggtggcggt
     3601 gccggcgatc gacgggtact tcacgttcga gaacatgccg tgcagcgcat ggccgaactc
     3661 atggaacatg gtggtgacgt cgtcgaagct gatcagcgcg ggctggccgg cggccggctt
     3721 ggtgaagttg cagacgttgt agaccaccgg cttggcaccg gtcaggccgt cctgttcgac
     3781 gaacacgtcc atccaggcgc cgccggactt gctgtcacgc ttgaagtagt cggtgtagaa
     3841 cagggccagc gaggtgccgt ccttgtcgaa cacttcgtac accttcatgt ccgggttgta
     3901 ggtcggaatg tcggtacgcg gcttgaaggt gatgccgtac agctgggtgg cggcgtagaa
     3961 gacgccgttc tgcagcacgt tgtccagttc gaagtacggc ttgatctgcg actcgtccag
     4021 atcgtacttg gccttgcgca cctgctcggc gtagaagtcc cagtccgatg cagcgacctg
     4081 gaagccgccc ttctgcgcgt cgatcacctt ctggatctcg ccggcttcgg cgcgggcctt
     4141 ggcggtggcg gccggcacgg tgtcggtcag cagcttcagc gcggcggccg gggtcttggc
     4201 catctggtcg cccagctggt agtcggcgaa ggtatcgaag ccgagcagct tggccttctg
     4261 cgcacgcagc tgggccaggc gctgcacggt ctgccgggtg tcgttggcat caccgcgctc
     4321 ggcacgggtt tccgaagcct tcagcacggc cgcgcgctgg tcgcggtcgc tgagcgagcc
     4381 gagcaccggc tgctgggtgg tgttctgcag cggcagcacg aacttgccgt ccagcttgcg
     4441 gtccttggcg gcggcggccg cgttgttgat cgcgtcctcg tccagcccgg ccagcttggc
     4501 cttgtcgtcg acgaccacgg cggcggcggc ggtggcggcc accaggcggg tgtggaactg
     4561 ggtggagagg gtggtctctt ccacgttgag cttgcgcagc gatgccttgt cggcgtcgga
     4621 cagctgcgca ccggcacgta ccaggccgtc gtagtagtgc tcgaccaggc gcttctgcac
     4681 cgggtccagc tccagcgtgt cgcgctggtc atagatcgac ttcacgcgcg cgaacagctt
     4741 cggatcgagg ttgatctcgt cctggtgcgc ggccagcttc ggcgccactt cttcctggat
     4801 cttctggcgc gcgtcgttgg tatcggcctg gaccaggccg aagaagatgc gcgacacgcg
     4861 ggtcagggtc tcgccgctgc gctccatcgc cacgatggtg ttgtcgaagg tggccggttc
     4921 gctgctgtcg gcgatcttgc gcacctcggc caggtgctgg cgcatgcctt cctcgaaggc
     4981 cggcaggtag tcgctgtcct tgatcttgtc gaactgcggc gcctggaacg gcagcgtgct
     5041 ggcgctcagc agcgggttgg tggaggcttc ggccggctgc tgggccgggg tcttctgggc
     5101 ttcggacacg ggggtggact ccttgccgga acaggccgcc agcgccaggc tgatggcggc
     5161 ggccaggact acggtacgcg acatgtaaaa cgctccttgg gcagacggta tggaatacca
     5221 gccctccacc ctactcctgt cgcgctcgcc cggcatgtgc cggacgtggc gtctatgcgg
     5281 ggcctgccgg ccggctcaga ccgtgccgcg ggtcttgccg atccagggcc ggtagaactc
     5341 gcggatggcg gccatgtcgg ccgcgtcatc accgctgggc gtgaacagcg gcccgatgcc
     5401 gatggtcttt tccgggtagt ggaagtacgc ggccaggatc ggcacgtcgg ccatccgcgc
     5461 gatcttcagg aaaccggcct tccagtcctt caccgccttg cgggtgccct cgggggtgat
     5521 cgcgaaccac atcttctcgt tgttgcgcag caggtccacc gcctggccga cggtgccctg
     5581 cggcgagctg cggtcgagcg gaatcacgcc cagcttgtgc agcagcgggc ccagcggcca
     5641 ccagaacagc gaggccttgc ccagcacctt caccttcatg cccagcgcga tcttggccgc
     5701 catgccccac agtccgtccc agttggacga atgcggcgcg atgatgaaca ccagccgggg
     5761 gatgtcgggc agggtgccgg tcaccttcca gccgcccatg cgcagggtgc agcgcgccag
     5821 ccagcgcagg aaggcgttgg gtttgacctg cggcatctgc ggcggaacgg ccggcagcaa
     5881 cggagtcggg ttgttcaagc aatcactccc agtcacgtga tgagcgcccg cgcttgatct
     5941 gcgcgcgccc gcgtttggcg tccagacgac gcagtttcga cccgagggtc ggcttggtgg
     6001 ccttgcgcgg tttgggcacg ctcagcccgg cctggatgaa ggccgccagc cgatcgcgcg
     6061 catcctcgcg attgcgatcc tgggtccgga accgttgcgc atcgatgacc agcacgcctt
     6121 cgccggtcat gcgccggtca cgccgcgcca gcaggcgcgt gcgcaacggc tcgggcaacg
     6181 agggcgagtt ggccacgtcg aaacgcagtt ccaccgcggt ggagaccttg ttgacgttct
     6241 gcccaccggc gccactggca cgcacgaacc gctcgacgat ctcgccgtcg gggatttcaa
     6301 gctgcgcgct gatggtgacc ggtccactgc ccatccgcgc attgtagcgg cagccacgtc
     6361 ctgcagtgcg gcatcgcgca ccgtatgccg ccgatcaggt accgaacacg ccgccttcgc
     6421 cttggctgcg ggtatgctgg ccgtcccatg taccgcagga agcccgcatg acccgcaccg
     6481 cacccgccct gccgtccctg ctgcgccgcg ccgccctgct gctggcgctg gccgtggcca
     6541 gtgtgccggc cctggccgcg ccgccgaccg atggcgacat caaccgcctg ctctcggcct
     6601 cgcgcgcgca gagcatgatc gacaccatgc tgccgcagat cgaggcgatg cagcagcagc
     6661 agttccagca ggtggccgcg cagcgccagc tcaacgccca gcagcaggag cagctgaagc
     6721 ggatccaggc aaggaccagc cagaccctgc gccaggccct gtcatggcag cagctgcggc
     6781 cgatgtacgt ggacctctac aagaagacct tcagcaagga agacgtgctg gcgatggccg
     6841 agttctacga gagtgcggcc ggccagagcc tgctggacaa gaccccggcg ctgatgcaga
     6901 acgtgatggt ggccatccag gcgcgaatgc agccgctgtt cgcggacctg cagaaggacc
     6961 tggaagcgat cgtcaacgag ccggaaa
//
LOCUS       DAOKIP010000202         6967 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.203,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000202 DAOKIP010000000
VERSION     DAOKIP010000202.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 6967)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6967)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6967
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.203"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(12..743)
                     /locus_tag="QEL58_003365"
     CDS             complement(12..743)
                     /locus_tag="QEL58_003365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDS1677800.1"
                     /translation="MRVVIADDEPLARERLRSLLAAQDGVDVVAEAGNGEQALHACAE
                     LQPDLVLLDIAMPGLDGLEAARHLASFEPRPAVVFCTAYDAHALSAFEAAAIDYLMKP
                     VRAERLAAAIARARTFLAGRDGQPQDNSGQQARSMLCARLRGSLRLIPLDDIHYLQAE
                     EKYVVVHHARGEDLIEESLKSLEEEFASRFIRIHRNCLVARHELVELRRGSGGQVQAM
                     LRHGKQPLEVSRRCVAMLKQELRHL"
     gene            complement(754..1797)
                     /locus_tag="QEL58_003366"
     CDS             complement(754..1797)
                     /locus_tag="QEL58_003366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HDS1677801.1"
                     /translation="MAPASAPPWMPELCRLPRLAAMLGLAELVVVVLALAPDGSRHWT
                     FGELLSASGFALWLALAVSASLCLLRQALSRLPQVLGAVAAIALATLIAVVCAGIVHA
                     LYAVLGDNFASGISFWRFTLGSAATTALITALALRYFYVSDRWAAQVQANARAQADAL
                     QARIRPHFLFNSMNLIASLLHRDPAVAERAVLDLSDLFRAALGAGEGDSTLRDECELA
                     ERYLSIESLRLGERLQVQWQRDEPLPWDLPLPRLVLQPLVENAVLHGISRLPEGGTIE
                     LQLVREGQELQIRVRNPAPDPQAPGLALARGAGHAQHSIGHRLAWRFGSAARMTAGWS
                     EGYYACQVTVPIQ"
     gene            complement(1801..2460)
                     /locus_tag="QEL58_003367"
     CDS             complement(1801..2460)
                     /locus_tag="QEL58_003367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDS1677802.1"
                     /translation="MLQTVEQETGASPQWSVIWLHGLGADGHDFAPIVPELVRPHWPA
                     LRFVFPHAPVRPITINNGVPMRGWYDIVGMDFRSRADMAGVQESVVQLDALIAREIER
                     GIAPEKIFLAGFSQGGAIILTAALSRTAPLAGLIALSTYLPEAESAKRVDGAVQVPVF
                     MAHGSSDPVIPQAVAVHSAQALQALGLELEWHSYPMAHQVCAEEIQALGDWLQERLGA
                     A"
     gene            complement(2511..4436)
                     /gene="mdoH"
                     /locus_tag="QEL58_003368"
     CDS             complement(2511..4436)
                     /gene="mdoH"
                     /locus_tag="QEL58_003368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005419550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucans biosynthesis glucosyltransferase MdoH"
                     /protein_id="HDS1677803.1"
                     /translation="MGGQTIHAEADAPRLDAGWALLPAESPLQMPEQTLREGALKVRR
                     HRTSPRLIGLRRFYIFGGTLGMTAVATRMMWRVLSTNGISVLEACLLVLFVGLFAWIA
                     LSFASALAGFLTAVFDRGYRLGIDPDKPLPTVHSRTALLMPTYNEDPRRLLAGLQAIY
                     ESVAATGQLERFDFFVLSDTRREDIARAEEQVFAELRDRVPDGQTRLFYRRRGDNSGR
                     KAGNIADWVRRFGGAYPQMLILDADSLMTGDSIVRLVAGMEHNADVGLIQTLPSVIGG
                     RTLFARMQQFGGRVYGPVIARGVAWWHGAESNYWGHNAIIRTRAFADHAGLPALPGRK
                     PFGGHVLSHDFVEAALMRRGGWAAHMVPYLGGSYEEGPPTLTDLLVRDRRWCQGNLQH
                     GKVVGSRGLHWISRTHMLIGIGHYFTAPMWAMLMLIGIAIPLFQQGIDFNALLHLSPS
                     VYWRAQDEEQVVRLFAATMAVLLLPKVLGYLAMLLDPVDRRGCGGAIRAFVSMLVETV
                     LAALMAPVVMYVQSRGVAEVLSGRDSGWDAQQRDDGGISWLALIRGYGGLGVFGAFMG
                     VLAWAVSPSLAAWMAPVVIGMVLAVPVVALTSSRGPGAFLHRLGLLDIPEENIPPPVL
                     VRAAQLRREAAEQPPLY"
     gene            4927..>6967
                     /locus_tag="QEL58_003369"
     CDS             4927..>6967
                     /locus_tag="QEL58_003369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005414558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDS1677804.1"
                     /translation="MSLSFRSRSAHPTRSRLAVAVATTCLLALPGLAAAEAAADASTK
                     DLDTVVVTASGNQQWIKDAPASISVISREDIERQPVHDLATLLSRVPGVTGGLSAAGE
                     QSKIKLRGMPSNYTLVLVDGKRMGSSASTNYRPDLGRQDLNWISPDQIERIEVVRGPM
                     SSLYGSDAMGGVINIITKRIGDDWNGSATHSYTRPGDDKRGDTQQIGATFSGPLGERF
                     GLRIGANSMRRDSDRSNGGVYGNAYAGEKDRNVDALLQWKLSDAQELSLEAGHGVQQA
                     FIDAALEKQDEGAWGATELKRSSLALNHDGKWRFGNSKISAYWTEYKNDIGATGRSEA
                     TDTIIEGSLTTPFTLGVEHQFAVGGQWKRQELTNTDTIGRAPIDYAGNAVSGSDLEVD
                     TWALFVEDELKLHRTLALTLGARLDHHEKFGGHVSPRAYLVWHPAEQWTIRGGVSKGF
                     RAPSLTENSATAATQSGGRGCTSLIPLGYTRGGCYMAGNPDLDPETSTNREIGVSFDN
                     DWVDAGLTYFHTDFRNKIEYAPLGRFNGIWWTRMSNVQRARTSGMEGNLNFRFGEHWR
                     WRTSATWMKEAKNLTTGRNLIDTPEFSGYSSLDWTPNTAFSSSLSAQYTGKQDGVATT
                     FLKAYTLYDLTAAWNVNPVLTLRGGVSNLADKKLYAEGSTDYFVAGRSYFLSMTAR"
BASE COUNT         1222 a         2513 c         2224 g         1008 t
ORIGIN      
        1 gcgcggcccc ctcacagatg ccgcaattcc tgcttcagca tcgccacgca gcggcggctg
       61 acttccagcg gctgcttgcc atgcctcagc atcgcctgca cctgcccacc cgagccacgg
      121 cgcagttcca ccaactcgtg gcgtgccacc aggcagttgc gatggatgcg gatgaagcgg
      181 ctggcgaact cctcctccag cgacttcaac gattcctcga tcaggtcttc gccgcgcgcg
      241 tggtgcacca ccacgtactt ctcttcggcc tgcaggtaat ggatgtcgtc cagcggaatc
      301 agccgcaggc tgccgcgcag gcgtgcgcac agcatgctgc gtgcctgctg cccgctgttg
      361 tcctgcggct ggccgtcgcg cccggccagg aaggtacgtg cacgtgcgat cgcggcagcc
      421 aggcgttcgg cacgcaccgg cttcatcagg taatcaatgg ccgccgcctc gaaggccgac
      481 agcgcatgcg cgtcgtaggc ggtgcagaac accactgccg gccgtggctc gaagctggcc
      541 aggtggcggg ccgcttccag gccatccagc cccggcatcg cgatatccag caggaccagg
      601 tccggctgca gctccgcgca ggcgtgcagg gcctgctcgc cgttgccggc ctcggccacc
      661 acgtcaacgc cgtcctgcgc cgccaacagg ctgcgcaggc gctcgcgcgc cagcggttcg
      721 tcatcggcga tgactaccct cacgatcgtc ccctcactgg atcggcaccg tcacctggca
      781 ggcatagtag ccctcgctcc agccggccgt catccgcgcg gcactgccga agcgccaggc
      841 cagccgatgg ccgatgctgt gctgggcatg cccggcaccg cgcgccagcg ccagccccgg
      901 ggcctgcgga tcgggcgcgg gattgcgcac gcggatctgc agctcctggc cctcgcgcac
      961 cagctgcagc tcgatggtgc cgccttcggg caggcgcgag atgccgtgca gcacggcgtt
     1021 ctccaccagc ggctgcaata ccagcctcgg caatggcagg tcccacggca gtggttcgtc
     1081 acgctgccac tgcacctgca ggcgctcgcc caggcgcagc gattcaatcg acagataacg
     1141 ctcggccagc tcgcattcgt cgcgcagggt cgaatcgccc tcgcctgcgc ccaacgcggc
     1201 acggaacaga tcggacagat cgagcaccgc gcgctcggcc actgccggat cgcgatgcag
     1261 caggctggcg atcaggttca tgctgttgaa caggaaatgc gggcggatcc gcgcctgcag
     1321 cgcatcggcc tgcgcgcgcg cgttggcctg cacctgcgcg gcccagcgat cactcacata
     1381 gaaatagcgc agcgccagcg ccgtgatcag tgcagtggtg gccgcactgc ccagggtgaa
     1441 gcgccagaag ctgataccac tggcgaagtt gtcccccagc accgcgtaca gcgcatgcac
     1501 gatgccggcg cagaccaccg cgatcagggt cgccagggcg atcgccgcga ccgcgcccag
     1561 tacctgcggc aacctcgaca gcgcctgccg cagcaggcac aggctggccg agaccgccaa
     1621 cgccagccac agcgcgaagc cgctggccga cagcagttca ccgaaggtcc agtggcgact
     1681 gccgtcgggc gccagggcca gcaccaccac caccagctcg gccaggccaa gcatcgccgc
     1741 caaccgcggc aggcggcaca gctccggcat ccacggtggt gcgctggccg gggccatggc
     1801 tcaggcagcg cccagccgtt cctgcagcca gtcacccagc gcctggatct cttcggcgca
     1861 gacctggtgg gccatcggat agctgtgcca ttccagctca aggcccagcg cctgcagtgc
     1921 ctgcgcgctg tgtacggcca ccgcctgcgg aattaccgga tcgctgctgc catgggccat
     1981 gaacaccggc acctgcacgg caccgtcaac tcgcttggcg ctttcagcct caggcaaata
     2041 ggtggacagc gcgatcaggc cggccagcgg cgcggtgcgc gacagcgccg cggtgaggat
     2101 gatcgccccg ccctgcgaga agcccgccag gaagatcttc tccggcgcga tgccacgctc
     2161 gatctcacgt gcgatcagcg cgtcgagctg caccaccgat tcctgcacgc cggccatgtc
     2221 ggcgcgcgaa cggaagtcca tgccgacgat gtcgtaccag ccacgcatcg gcacgccgtt
     2281 gttgatggtg atcggtcgca ccggcgcgtg cgggaacacg aagcgcagcg ccggccagtg
     2341 cggccgcacc agttccggca cgatcggtgc gaagtcatgg ccgtcggcgc cgaggccgtg
     2401 cagccagatc accgaccact gcggcgaggc gccggtttcc tgttccaccg tttgcagcat
     2461 gatgcggctc cttcaagttc gagccgcatt atgccgctgg cgcggggcga tcagtacagc
     2521 ggcggttgct cggccgcttc ccggcgcagc tgcgcggcgc gtaccagcac cggcggcgga
     2581 atgttctctt cggggatgtc gagcaggcca aggcggtgca ggaaggcgcc cgggccgcgc
     2641 gaggaggtca gtgccaccac cggcaccgcc agcaccatgc cgatcaccac cggcgccatc
     2701 cacgccgcca gcgacggcga taccgcccag gccagcacgc ccatgaaggc accgaacacg
     2761 cccaggccac cgtagccacg gatcagcgcc agccacgaga tgccaccgtc gtcgcgctgc
     2821 tgtgcgtccc agcccgagtc gcggccggac agcacttcgg ccacgccgcg cgactgcacg
     2881 tacatcacta ccggggccat cagcgcggcc agcacggttt ccaccagcat cgagacgaac
     2941 gcacggatcg cccccccgca gccgcgccgg tcgaccgggt ccagcagcat cgccaggtag
     3001 cccagcacct tgggcagcag cagcacggcc atggtggcgg cgaacaggcg caccacctgt
     3061 tcctcgtcct gggcccgcca gtacacgctg ggcgacaggt gcagcagggc gttgaagtcg
     3121 atgccctgct ggaacaacgg gatggcgatg ccgatcagca tcagcatcgc ccacatcggc
     3181 gcggtgaagt aatggccgat gccgatcagc atgtgggtgc ggctgatcca gtgcaggccg
     3241 cggctgccca ccaccttgcc gtgctgcagg ttgccctggc accagcggcg gtcacgcacc
     3301 agcaggtcgg tcagcgtcgg cgggccttcc tcgtagctgc cgcccaggta cggcaccatg
     3361 tgcgcggccc agccgccacg gcgcatcagc gcggcttcca cgaaatcgtg gctgagcacg
     3421 tggccgccga acggcttgcg ccccggcagc gccggcaggc cggcgtggtc ggcgaaggcg
     3481 cgggtgcgga tgatcgcgtt gtggccccag tagttgctct cggcgccgtg ccaccaggcc
     3541 acgccacggg cgatcaccgg gccgtacacg cggccgccga actgctgcat gcgggcgaac
     3601 agggtgcggc ctccgatcac cgacggcagc gtctggatca ggccgacatc ggcgttgtgc
     3661 tccatgcctg cgaccaggcg cacgatgctg tcgccggtca tcaggctgtc ggcgtcgagg
     3721 atcagcatct gcggataggc accgccaaag cggcgcaccc agtcggcgat gttgccggcc
     3781 ttgcgcccac tgttgtcgcc acggcggcga tagaacagtc gcgtctggcc gtccggcaca
     3841 cggtcgcgca gttcggcgaa cacctgctct tcggcacgcg cgatgtcctc gcggcgggta
     3901 tcgctgagca cgaagaaatc gaagcgctca agctggccgg tggcggccac cgattcatag
     3961 atggcctgca ggcccgccag caggcggcgc ggatcttcgt tgtaggtcgg catcagcagc
     4021 gcggtgcggc tgtgcacggt cggcagcggc ttgtccgggt cgatgccgag gcggtagcca
     4081 cggtcgaata cggcggtcag gaagcccgcc agtgcgctgg cgaaggacag cgcgatccag
     4141 gcgaacaggc ccacgaacaa caccagcagg caggcttcaa gcacgctgat gccattggtc
     4201 gacagcaccc gccacatcat ccgcgtggcc acggcggtca tgcccagcgt gccaccgaaa
     4261 atatagaacc gccgcaggcc gatcaggcgc ggcgacgtgc gatgccggcg gaccttgaga
     4321 gcgccttcgc gcagtgtctg ctcgggcatc tgcaacggag attcagcagg cagcagcgcc
     4381 cagccggcat ccagccgggg cgcatccgct tccgcgtgga tggtctgacc ccccatcacc
     4441 gcctactccg cacgttcggc acggccggcc atcccggcca ggctgcatgc acgaaggttc
     4501 ccggcgcgcc ttcccggcgc ccgcacttgt cctggctgtg ccggcccttg gccgcacagt
     4561 cgatgtctgt cactaccgga acccacacga tctccaacgg ggcggaatcg aaaatgcggc
     4621 ccagtctagg gcgccggatg taagccgggt gcgaaggcct acgccgggaa ttatccccat
     4681 tcagcaaaca gcaggcgatg acgccccgcg atcgaggttg tcgcttcatt acgacaggta
     4741 ctggatcgta acaaacgcga acggttatca tttcattaac caggcaggtc accgtcttcc
     4801 cgacggttga gacccaccca gccgcgccgg ccccgccgcg cgccgacgac ccacggaagg
     4861 gggctgcctg ctgtctgcct gcgcctgcgc ttccaccggg tctctccttc tcccatggaa
     4921 gccgtcatgt ccctgtcatt ccgttcccgt tccgcgcacc ccacgcgcag ccgcctggcc
     4981 gtcgccgttg ccaccacctg cctgcttgcc ctgcccggcc tggccgccgc cgaggccgcc
     5041 gccgatgcct ccaccaagga tctggacacc gtggtggtca ccgcctcggg caaccagcaa
     5101 tggatcaagg atgctcccgc cagcatcagc gtgatcagcc gcgaggacat cgagcgccag
     5161 ccggtgcacg atctggccac cctgctcagc cgcgtgcccg gcgtgaccgg cggcctcagc
     5221 gcggccggcg agcagtccaa gatcaagctg cgcggcatgc cgtccaacta cacgctggtg
     5281 cttgtggacg gcaagcgcat gggcagctcg gcctcgacca actaccgccc cgacctcgga
     5341 cgccaggacc tgaactggat ttcgccggac cagatcgagc gcatcgaagt ggtgcgcggg
     5401 ccgatgtcgt cgctgtatgg ctccgacgcc atgggcggcg tgatcaacat catcaccaaa
     5461 cgcatcggtg atgactggaa cggtagcgcc acccacagct acacgcgacc aggcgacgac
     5521 aagcgcggcg acacccagca gatcggcgcc acgttctccg gcccgctcgg cgagcgcttc
     5581 ggcctgcgca tcggcgccaa cagcatgcgc cgcgattccg accggtccaa tggcggtgtc
     5641 tacggcaatg cctatgccgg cgagaaggac cgcaatgtcg acgcgctgct gcagtggaaa
     5701 ctcagcgacg cgcaggaact gtcgctggaa gccggccacg gcgtgcagca ggccttcatc
     5761 gatgccgccc tggaaaagca ggacgaaggt gcatggggtg ccaccgaact caagcgcagc
     5821 tcgctggcgc tcaaccacga tggcaagtgg cgcttcggta actcgaagat cagcgcgtac
     5881 tggaccgagt acaagaacga catcggcgcc accggccgct ccgaggccac cgacaccatc
     5941 atcgaaggca gcctgaccac gccgttcacc ctcggcgttg aacaccagtt cgccgtgggt
     6001 ggccagtgga agcgccagga gctgaccaac accgacacca tcggccgtgc accgatcgac
     6061 tatgccggca acgcggtcag cggctccgat ctggaagtgg acacctgggc gctgttcgtc
     6121 gaggacgaac tgaaactgca tcgcaccctg gcgctgacgc tgggcgcacg cctcgatcac
     6181 catgagaaat tcggcggcca cgtcagcccg cgtgcctacc tggtctggca cccggccgag
     6241 cagtggacga tccgtggcgg cgtctccaag ggtttccgcg cacccagcct gaccgagaat
     6301 tcggcgactg ccgctaccca gtccggtggc cgtggctgca cctcgctgat cccgctgggc
     6361 tatacccgcg gcggctgcta catggccggc aacccggacc tggacccgga aaccagcacc
     6421 aaccgcgaga tcggcgtcag cttcgacaac gactgggtgg atgccggcct gacctacttc
     6481 cacaccgact tcaggaacaa gatcgagtac gccccgctgg gcaggttcaa cggcatctgg
     6541 tggacgcgca tgagcaacgt gcagcgcgca cgcaccagcg gcatggaagg caacctcaat
     6601 ttccgcttcg gcgagcactg gcgctggcgc acttcggcga cctggatgaa ggaagccaag
     6661 aacctgacca ccggccgcaa cctgatcgac acgccggagt tctccggcta ttcgtcgctg
     6721 gactggacgc cgaacacggc gttctccagc agcctgtcgg cgcagtacac cggcaagcag
     6781 gacggcgtgg ccaccacctt cctcaaggcc tacaccctgt atgacctgac cgccgcctgg
     6841 aacgtcaacc cggtgctgac cctgcgcggc ggtgtcagca acctggccga caagaagctc
     6901 tatgccgaag gctccaccga ctacttcgta gccgggcgca gctacttcct cagcatgacc
     6961 gcgcggt
//
LOCUS       DAOKIP010000203         6926 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.204,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000203 DAOKIP010000000
VERSION     DAOKIP010000203.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 6926)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6926)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6926
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.204"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(12..578)
                     /gene="efp"
                     /locus_tag="QEL58_003370"
     CDS             complement(12..578)
                     /gene="efp"
                     /locus_tag="QEL58_003370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019301003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HDS1677805.1"
                     /translation="MASYGMNDVKNGMKILVNNQPAVIIDTEYVKPGKGQAFTRVKYR
                     LIKDGRTQEVTMKSTDSLDAADVVDTDMNFMYSDGEYWHFMDPESFEQVQATKAGMGG
                     AEKWLKGEESCVVTLWNGEPIFVQPPNFVELKITETDPGVRGDTSGGGGKPATLETGA
                     VVRVPLFVNQDEIIKVDTRSGEYSARVK"
     gene            675..1715
                     /gene="epmB"
                     /locus_tag="QEL58_003371"
     CDS             675..1715
                     /gene="epmB"
                     /locus_tag="QEL58_003371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011408738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EF-P beta-lysylation protein EpmB"
                     /protein_id="HDS1677806.1"
                     /translation="MITAGPLSMQLSAFPRPQSPGAPARWQQLWRQALRDPHALLARL
                     QLDPAALGVSEAAIAQFALRVPEGFVARMRTGDAADPLLRQVLPIDEEMRPAPGFSFD
                     AVGDGAAKKATGVIQKYRGRALLVATGSCAINCRYCFRRHFDYGAENAAKGGWQEAVA
                     AIAADPDIDEVILSGGDPLSLATHKLVELTDALRAIPHIRRLRIHSRLPIVLPERVDE
                     ELLAWLGSLPWPLAIVVHANHANEFDANVDAAMARLRGTGAQLLNQAVLLRGVNDSVQ
                     ALQDLSERSFAAGVLPYYLHQLDKVEGVAHFEVDDTEAKALIAGLTARLSGYLIPKLV
                     RELPGDPSKRPV"
     gene            complement(1799..3925)
                     /locus_tag="QEL58_003372"
     CDS             complement(1799..3925)
                     /locus_tag="QEL58_003372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014647803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HDS1677807.1"
                     /translation="MKWLGSGMQARFLLAMGGAMVVVVAILAVLLGRQTAMQGEVRSL
                     SGGVIHELFDRSVRSRGEAMARELSDSLANPLYYRDLDQVGALVRGTARQPVVRYVLV
                     FDERGRLVHDGSIEVAGFGQQMADPLAPKAAAAQALVVQESPKVLDNTMPIMIGNQRI
                     GGVRVGMALDEVQQREQAANATLGERLQQAGSRHLGWLLLMLGLLVVIGVVVILYVQR
                     TLVAPIRDLAAAARRIEAGDYQTPLAENTRDDEVGELVRGFARMRDAIARHDREVRHM
                     AYTDALTGLTNRLAFREALDHRLMAARASNHRLGLLFADIDDFKRVNDTLGHEAGDEA
                     LLQFAQRIGRAVTEAGGDEALLARFGGDEFVILVGDGDVAANARLLAEVLVRELGKPL
                     VVQGRELFLGTSIGVTLFPDDAADATTLLKNGDIAMYQAKMAGKNCYRYYSRAMDHAV
                     ERRVHMEQELRGAWERGELRLAYQPIFRMRDRRMVGVEVLLRWQHPTLGTIPPSVFIE
                     VAEQSGLIEIIGPKVLRAACMEAAQWPRGVAGDDLFVSVNVSPRQLRGGELPALVAQC
                     LHESGLPASRLHLELTETAVIGDEMVAAQLLDKLHRTGVKVWLDDFGTGFSGLSHLRQ
                     VPVDGVKIDKSFVADMQRDPDDLALTTAIIAMAHALGITVVAEGIEQQAQFELLAQRG
                     CDLGQGYWLSHPVTATEVVRMIESGL"
     gene            complement(3922..4854)
                     /locus_tag="QEL58_003373"
     CDS             complement(3922..4854)
                     /locus_tag="QEL58_003373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010486605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate/phosphite/phosphonate ABC transporter
                     substrate-binding protein"
                     /protein_id="HDS1677808.1"
                     /translation="MKPVSGLRKAMQGALLSLAMVLLAGTVRAAPDPVLVLGRISDDP
                     KAHYEQLQPLLDYVVARMHDVGIREGRILMARDPQQMASYLRRGRVDWVTETAGTAVA
                     LGQRSGARPLLLTERNGVREYQTVFFVRNDSPIQRMRDLPGHRLALQNTASTSAYLVP
                     VMTLLQEGLSPQILAGDWDMPGRDSVGYVFARSELNIATFVHKGVVDVGAVSSVDWND
                     ERRVPAAFRRDFRELLRTEPYPRAVEMVRSDLDPRVRDRLQEVLLQAASDPRAQGALH
                     RFFGTSGFHRVDAHAQQRLDELKQGLTRVRMEVE"
     gene            complement(4901..5671)
                     /locus_tag="QEL58_003374"
     CDS             complement(4901..5671)
                     /locus_tag="QEL58_003374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010486603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA methyltransferase"
                     /protein_id="HDS1677809.1"
                     /translation="MSQFPAATRLRFVLVGTQHPGNMGAAARALKTMGLARLVLVAPE
                     KPLDEEAFRRSAGAEDVLGDAPVVATLAEAVADCRLVLGCTARARRVQLEEYLPADAA
                     ARAVAKAGEGAEVALVFGRERTGLTNEELQLCHAAVHIPSDPEFSSLNLAAAVQVLAY
                     ETRMQLLGAQPAAAAEPGFREQVASHEQMESFFAQLGDTLDEIDFHKGRAPESAMRKL
                     RRLFLRSEPSEQEVRLLRGILADTQRMARLAQAGSKDS"
     gene            5792..6619
                     /locus_tag="QEL58_003375"
     CDS             5792..6619
                     /locus_tag="QEL58_003375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005913068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase"
                     /protein_id="HDS1677810.1"
                     /translation="MQKPAVTVMVKAARLAGNVLLRNINKLEALNVVQKGRMDYASEV
                     DADAEKVIVKELKRAYPEYGIFGEEGGVQGERRQMWVIDPLDGTSNYLRGVPHYCVSI
                     ALVENGEPTDAVIFDPLRNELFTASRGAGAVLNDRRIRVADRKDLDGTMIHTGFAPRE
                     RARASAQLKAVDALLVHGEDIRRTGSAALDLAYVACGRADAYFEAGVKAWDIAAGLLL
                     VREAGGKVCDFKGATLGRMDNRGPETHQIVAGNLKVAESLQKVLVNTGYAAEFDAKF"
BASE COUNT         1143 a         2476 c         2200 g         1107 t
ORIGIN      
        1 cggccggaac cttacttgac gcgtgcggag tattcgcccg aacgggtatc aaccttgatg
       61 atttcatcct ggttgacgaa cagcggcacg cggaccacgg cgccggtttc cagggtggcc
      121 ggcttgccgc cgccgcccga ggtgtcgcca cgaacgcccg gatcggtttc ggtgatcttc
      181 agttcgacga agttcggcgg ctgcacgaag atcggctcgc cgttccacag ggtcaccacg
      241 caggactctt cgcccttcag ccacttctcg gcgccgccca tgccggcctt ggtggcctgg
      301 acctgctcga aggattccgg gtccatgaag tgccagtact cgccgtcgct gtacatgaag
      361 ttcatgtcgg tatcgacgac gtcggctgca tccagcgagt cggtcgactt catggtcact
      421 tcctgggtac ggccgtcctt gatcaggcgg tacttcacgc gggtgaaggc ctggcccttg
      481 cccggcttga cgtattcggt gtcgatgatg acagccggtt ggttgttgac caggatcttc
      541 atcccgttct tgacgtcgtt catgccgtag ctggccatgc gtaaactcct gagtggcaaa
      601 aacgccgcgg gtgcggcgag ccgttagaat ggaaagccca ccggatgccg gtgggcgaca
      661 gtttttctgc ccccatgata accgcaggcc ccctctccat gcagctttcc gccttccccc
      721 ggccccagtc gccaggcgcg cccgcgcgct ggcagcagct ctggcgccag gcgctgcgcg
      781 acccgcacgc cctgctggcc cggctgcagc tggacccggc cgcgctgggc gtctcggaag
      841 cggccatcgc ccagttcgcg ctgcgcgtac ccgagggctt cgtggcccgc atgcgcacgg
      901 gcgacgccgc cgacccgctg ctgcgccaag tgctgccgat cgacgaggaa atgcgcccgg
      961 cgcccgggtt cagcttcgat gcggtgggtg atggtgcggc caaaaaggcc accggggtca
     1021 tccagaaata ccgcggccgc gccctgctgg tcgccaccgg cagctgcgcg atcaattgcc
     1081 gctactgctt ccgccgccac ttcgactacg gtgcggagaa tgcggccaag ggcggctggc
     1141 aggaagcggt cgccgccatc gcggccgatc cggacatcga cgaggtgatc ctgtccggcg
     1201 gcgacccgtt gtcgctggcc acgcacaagc tggtcgaact gaccgacgca ctgcgcgcga
     1261 tcccgcacat ccgccgcctg cgcatccaca gccgcctgcc gatcgtgctg cccgaacgcg
     1321 tggacgagga actgctggcc tggctgggca gcctgccgtg gccgctggcg atcgtggtcc
     1381 acgccaacca tgccaatgaa ttcgatgcca acgtggacgc ggcgatggcg cgcctgcgcg
     1441 gtacgggtgc gcagctgctg aaccaggcgg tgctgctgcg cggggtcaac gacagcgtgc
     1501 aggccctgca ggacctcagc gagcgcagct tcgccgccgg cgtgctgccc tattacctgc
     1561 accagctgga caaggtggaa ggcgtggccc acttcgaagt ggacgacacc gaggccaagg
     1621 cactgattgc cggcctcacc gcacgcctgt ccggctatct gatcccgaag ctggtgcgcg
     1681 aactgcccgg cgacccgagc aagcgcccgg tgtagcagta gatccacgcc atgcgtggat
     1741 gctcctgccc ggaaaaacca tccacgcatg gcgtggatct accgggcgcc gccgtgggtc
     1801 agaggcccga ttcgatcatc cgtaccactt cggtggcggt caccgggtgg ctcagccagt
     1861 agccctggcc gaggtcgcag ccacgctggg ccagcagctc gaactgcgcc tgctgctcga
     1921 tgccttcggc aaccacggtg atgcccagcg cgtgggccat cgcgatgatc gccgtggtca
     1981 gtgccaggtc gtcgggatca cgctgcatgt cggccacgaa gctcttgtcg atctttaccc
     2041 cgtccaccgg cacctggcgc agatggctga ggccggagaa gccggtcccg aaatcatcca
     2101 gccagacctt cacgccggtc cggtgcagct tgtccagcag ctgcgcggcg accatttcat
     2161 cgccgatcac cgcggtctcg gtcagctcca ggtgcaggcg cgaagccggc agcccggact
     2221 catgcaggca ctgtgcgacc agcgccggca gttcgccgcc ccgcagctgc cgcggcgaca
     2281 cgttgaccga cacgaacagg tcgtccccgg ccaccccgcg cggccactgc gcagcctcca
     2341 tgcacgcagc gcgcagcacc ttcgggccga tgatctcgat cagcccgctc tgctcggcca
     2401 cctcgatgaa caccgacggc gggatcgtgc ccagggtcgg atgctgccag cgcagcagca
     2461 cctcgacacc gaccatgcgg cggtcgcgca tgcggaagat cggctggtag gccaggcgca
     2521 gttcgccacg ctcccaggcc ccgcgcagct cctgctccat gtgcacgcgg cgctcgaccg
     2581 catggtccat cgcccggctg tagtagcggt agcaattctt gccggccatc ttcgcctggt
     2641 acatggcgat gtcaccgttc ttcagcagcg tggtcgcatc cgccgcatcg tccgggaaca
     2701 gggtcacgcc gatggacgtg ccaaggaaca gctcccggcc ctgcaccacc agcggtttgc
     2761 ccagttcgcg taccagcact tcggccagca gccgcgcgtt ggcagcaacg tcaccgtcac
     2821 caaccaggat cacgaattcg tcgccaccaa agcgcgccag cagggcctcg tcgccaccgg
     2881 cttcggtcac cgcacggccg atgcgctgcg cgaactgcag caatgcttca tcgccggctt
     2941 catgaccgag ggtgtcattg acccgcttga aatcgtcgat gtcggcgaac agcaggccca
     3001 gccgatggtt ggacgcgcgc gcggccatca accgatggtc aagtgcctcg cggaaggcca
     3061 gtcgattggt caatccggtc agcgcgtcgg tgtaggccat gtgccgcact tcgcggtcat
     3121 ggcgggcgat cgcatcgcgc atgcgggcaa agccacgcac cagttcgccc acttcgtcat
     3181 cgcgggtgtt ctccgccaac ggcgtctggt agtcaccggc ctcgatgcgg cgggcggccg
     3241 cggccagatc acggatcggc gcgaccaggg tccgctgcac gtacaggatc accactacgc
     3301 cgatcaccac cagcaggccc agcatcagca gcagccagcc cagatgacgg ctgccggcct
     3361 gctgcaggcg ttcgccaagg gtggcattgg cggcctgctc gcgctgctgc acttcgtcca
     3421 gcgccatgcc gacgcggact ccgccgatgc gctggttgcc gatcatgatc ggcatcgtgt
     3481 tgtcgagcac tttgggcgat tcctgcacca ccagtgcctg tgcggcggcg gccttgggcg
     3541 ccagcgggtc ggccatctgc tggccgaagc cggcgacctc gatcgagccg tcatgcacca
     3601 accgcccacg ttcgtcgaac accaggacat agcgcaccac cggctgccgc gcggtaccgc
     3661 gcaccagtgc gccgacctgg tccaggtcgc ggtagtacaa cgggttggcc agcgagtcgg
     3721 acaactcgcg cgccatcgcc tcgccgcggc tgcgcacgct gcggtcgaac aactcgtgga
     3781 tgacaccgcc actgaggctg cgcacctcgc cctgcatcgc cgtctggcgc cccagcagca
     3841 ctgccaggat cgcgaccacc acgaccattg ccccgcccat cgccagcagg aaccgggcct
     3901 gcattccaga gccgagccac ttcattccac ttccatccgc acgcgcgtca atccttgttt
     3961 caattcatcc aaccgctgct gcgcatgcgc atcgacacgg tggaaaccgg aagtgccaaa
     4021 aaaccgatgc aacgctccct gcgcccgcgg gtcgctggcc gcctgcagca gcacttcctg
     4081 caggcgatcg cgcacgcgcg gatcaaggtc ggagcggacc atctccaccg cacgcgggta
     4141 cggctcggtg cgcagcagct cgcggaagtc gcgccggaac gcggccggca cccgccgctc
     4201 gtcgttccag tccacgctgc tcaccgcgcc tacgtcgacc acccccttgt gcacgaacgt
     4261 cgcgatgttc aactcgctgc gcgcgaacac ataccccacg ctgtcccgcc ccggcatgtc
     4321 ccagtcgccg gccaggatct gcggcgacaa cccctcctgc agcaaggtca tcaccggcac
     4381 caggtaggcg ctggtggacg ccgtgttctg cagcgccagg cgatgcccag gcaggtcccg
     4441 catgcgctgg atcgggctgt cgttgcgcac gaaaaacact gtctggtact cgcgcacgcc
     4501 attgcgttcg gtcagcagca agggccttgc gccgctgcgc tggcccagcg ccaccgccgt
     4561 gcccgccgtt tccgtgaccc agtcgacccg cccccgccgc agatagctgg ccatctgctg
     4621 cggatcgcgc gccatcagga tcctcccctc cctgatgccg acgtcgtgca tgcgggccac
     4681 cacataatcc agcaggggct gcagctgctc gtaatgggcc ttgggatcat cgctgatccg
     4741 gcccagcacc agcaccgggt ccggcgctgc acgcaccgtc ccggccagca ggaccatggc
     4801 caggctcagc agtgccccct gcattgcctt tcgcagaccc gacacaggct tcatcccccc
     4861 tgggtatcca gacagactac ccgaaaaaat gagaacgtcg tcagctgtcc ttgctgcccg
     4921 cctgcgccag tcgcgccatg cgctgggtgt cggcgaggat gccgcgcagc aggcgcactt
     4981 cctgctcgct cggctcgctg cgcaggaaca ggcggcgcag cttgcgcatc gccgattccg
     5041 gggcgcggcc cttgtggaaa tcgatctcgt ccagggtatc gccaagctgg gcgaagaagc
     5101 tctccatctg ctcatggctg gccacctgct cgcggaagcc cggctctgcc gcggccgccg
     5161 gctgtgcgcc cagcagctgc atgcgcgttt cataggccag cacctgcacg gccgcggcca
     5221 ggttgagcga gctgaactcc ggatcggacg ggatgtgcac cgcggcgtgg cagagctgca
     5281 gttcctcgtt ggtcaggccg gtgcgctcgc ggccgaacac cagcgccact tcggcaccct
     5341 cgcccgcctt ggccactgcg cgcgcagcgg cgtcggccgg caggtactcc tccagctgga
     5401 cccgtcgggc acgggcggtg cagccgagca ccaaccggca gtcggccacg gcctcggcca
     5461 gggtggccac caccggggcg tcccccagca cgtcttcggc accggccgag cggcggaagg
     5521 cctcctcgtc cagcggcttt tcgggggcga ccagcaccag gcgggccagg cccatggtct
     5581 tcagggcgcg ggcggcagcc cccatgttgc cggggtgctg ggtaccgacc aggacgaaac
     5641 ggaggcgggt ggcggcagga aactgggaca tgaacaggga aaaggtcgag ctggacgatg
     5701 accaatggta aactgtgcgg ccggccactg cgccggacct gctcttttcc cccgccagtc
     5761 catctcttct gcctttccgg gagcccacgc catgcagaaa cccgccgtca ccgtcatggt
     5821 caaggccgcc cgcctcgccg gcaacgtcct gttgcgcaac atcaacaagc tcgaggcact
     5881 gaacgtggtg cagaagggcc ggatggacta cgccagcgaa gtggatgcgg acgcggaaaa
     5941 ggtcatcgtc aaggaactca agcgcgccta ccccgaatac ggcatcttcg gcgaagaagg
     6001 cggcgtgcag ggcgaacgtc gccagatgtg ggtcatcgac ccgctcgatg gcaccagcaa
     6061 ctacctgcgt ggcgtgccgc actactgcgt gtcgatcgcg ctggtcgaga acggcgaacc
     6121 gaccgatgcg gtcatcttcg acccgctgcg caatgagctg ttcaccgcca gccgcggcgc
     6181 cggtgccgtg ctgaacgacc gccgcatccg cgtggccgac cgcaaggacc tggacggcac
     6241 catgatccac accggcttcg ccccgcgcga acgcgcccgc gccagtgccc agctgaaggc
     6301 ggtcgacgcc ctgctggtgc acggcgagga catccgccgc accggttcgg ccgcgctcga
     6361 cctggcctac gtggcctgcg gccgtgccga cgcctacttc gaggccggcg tgaaggcgtg
     6421 ggacatcgcc gccggcctgc tgctggtccg cgaagcgggc ggcaaggttt gcgacttcaa
     6481 gggcgcgacc ttgggccgca tggacaaccg cggcccggag acccaccaga tcgtcgccgg
     6541 caacctgaag gtggccgagt cgctgcagaa ggtgctggtg aacactggct acgccgccga
     6601 gttcgacgcg aagttctgat ctgcgcatag tcgcggttca tggagacggc acctgcgaag
     6661 gtgccgtttt cgtttgtgcg cacggagatt cgtttccgcg accgcggagg ggtgtcactt
     6721 tctttgcgcg caaagaaagt aaccaaagaa acgctccgcc agccgcgagc cgtcgctacg
     6781 cgccggtacc ctgcgcttct cggcgaatca ggggacggcg ccgaactcgc tgcgctcaaa
     6841 catcggcgcc tcttcgcccc tgattcccct gcgatgctcg gctcgctcaa ggcggaccca
     6901 aggtcaaatg ccacagctgc acccag
//
LOCUS       DAOKIP010000204         6902 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.205,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000204 DAOKIP010000000
VERSION     DAOKIP010000204.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 6902)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6902)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6902
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.205"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(66..1766)
                     /locus_tag="QEL58_003376"
                     /pseudo
     CDS             complement(66..1766)
                     /locus_tag="QEL58_003376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017154643.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
     gene            complement(1771..3873)
                     /locus_tag="QEL58_003377"
     CDS             complement(1771..3873)
                     /locus_tag="QEL58_003377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HDS1677811.1"
                     /translation="MPADPTGKAPVSDPRMAQALSRDRRRVVLSYLVMALAWMIATDG
                     AVQALVPDPQQAALWQGLKGAFFALASAGLLYLLLRPLAEHVLQTHARQQASELRLRQ
                     MFEGNPGPILVYDLDTLAILDANPAACVTFGWERDELLEQTIDALWPPGQDQALQTKL
                     EAIREAPEELCILRTQLQLRDGSLRQMELRSNAISYDGHNARLLIAIDRTAEDLAQLR
                     RDQALARVEEAHELARIGAWELDPSTALGRYSNQVYRLLGRRPPEARRWHRFDELLVP
                     ADPATATQTEQLLSELCSGDPVQVDVLLPLLSMDGRALMVHLRAASGIDESGRSRVLG
                     TLQDVTEREQSRRLLREREEQFRELVRVLPDGVVILSDEHVLYANAWAASLFGYGSHT
                     LLGEPLSALVAAGDLARVRSQLRAGQPHLGPGHSSVVAMQRADGRSFHAGLAVGEVRY
                     GGRDCKLLIVRDLSDSERTRSALETSNRELQAMAGRLFSLQEDERRAISRDLHDDIGQ
                     AITAIKLSAYAAQDEDDPQRRAEDLAQIVSLADTTVAKLRDISTLLRPPQLDALGLEA
                     ALSWQARVLFRSSPVELLAEIEPLPHRPDNSIEQACFRIAQESLTNVLRHARASQVQL
                     QLRDVGQRGLHLQIRDDGEGFDPDGPRGLGLIVMRERAQSVGGHVRIESAHGEGTLVD
                     VHLPYQAAGMAAVESPEY"
     gene            4005..6764
                     /locus_tag="QEL58_003378"
     CDS             4005..6764
                     /locus_tag="QEL58_003378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005416468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HDS1677812.1"
                     /translation="MDQGIIASLLQHPLASALVIVDRTGRPLAANPAAREHGLPATVA
                     AYAPMLEDLRLMAADGGIVACTLPGGPRGHYDGHLRAVHDGAGNLLAFTLSVPEPTPI
                     DGGGRWELALDSAGHSLWDWDIPSDRVARTPALGDETATEMLSRVHSEDIGQVRAALD
                     QHLRGQSEQYSAQFRFRQADGQWRWVLDRGRVVARTADGQPLRMVGTHTDIEQQKQLE
                     SLLQEQQLHLSEAQRIASMGSWSFDPTTGHFWWSPELRSLLALEQGAVPGQRRWLKQL
                     HPRSRGALRAAWRRLWRDGRAANLELELTRGNEPSQHLRLWMQPLMDMEGQPKRLLGQ
                     VQNITEQHQTDALIRWRTELLNRVSALGRIGGCEIEVQTRHMQWTEECYRIHGLRKEP
                     ITLDQALALYTEDSRSAFEAALVRIANGGLPEQLDLCFYRQSGLRVWVQVLVELDRRD
                     GLPPRFVVLFRDITREREANERIELLAHYDLLTGLPNRVLLGEQTAEAIEEARDRGTS
                     LAMLFIDLDGFKTINDSFGHATGDALLKAAATRLHQNLRNNDLFGRFSGDEFIVVLRD
                     LAEPEDAGHVARKLIASLAEPLRRGETTLKVGASVGIAMLGDAQTDFDSLLRAADAAM
                     YAAKEAGRNTYQYYSQDALARIQRKLELEHALHGAIEREEFSLAYQPLLHAHQGEPPA
                     IEALLRWHRPGIGYCSPAEFIPIAEKCGEIVRIGDWVLNEACRQATAWDHAGLRFDRI
                     AVNVSAVQLRDRGFAERVIEICHAHGWPPQRLELELTESALIRDTDILRHCFDVLERH
                     GVPLAVDDFGTGFSNLNYLNRFPVGRLKIDRSFVQGMLHDSGTAEVTQAIVHLGHALG
                     MKVVAEGVETHQEEDMLRRQGCDEIQGYLYSRPLSPRDLAQWLRQQHPSPMRTDASGE
                     VVLVR"
BASE COUNT         1080 a         2339 c         2368 g         1115 t
ORIGIN      
        1 tgcgggcgat cctcgccacc ctcgccggtt tcaaccggcg ccggcccggc attgctgcga
       61 cgctgttcct cgtaggtgcg gaacgcctgg tggatgtgct tgcgcaactc gtcgtcgttc
      121 catggcttgg tcaggaaacg gtagatcgcg ccgcggttga tcgcgtcggt caccgtgttc
      181 agatcggtgt agccggacag caccaggcgg atcgtatccg ggtacagcat cttcacccgg
      241 ccgaggaact cggtgccgct catgtcgctc atacgctggt cggacaggat cacctgcacg
      301 tcgttgatcg ccagcaggtc gaacgcatcg cgcacgttgc cggcggccag gatgcggtag
      361 ccatcgcggc ggaacagccg caccagcgag cgcagcacgt tctcttcgtc gtccagcagc
      421 agcagggtac ggtcggggcg ggtctcggcg aacgcttccg ggcgcaggta gcggcggcgc
      481 agggtcatgc cggcggcatc ggccgacatc ggttcgccga acaggtagcc ctggaacacg
      541 tcgcagtcgt tgcggcgcag gaagcccagc tgcgcctgcg actcgacgcc attggcgatc
      601 acggtcatgc ccagctggtg gcccatggcg atgatcgcgc gggcaatggc cgcctcgcgg
      661 ttgccggccg gcgcgctctt gatgaagctg cggtcgatct tcagcttgtc caccgggtaa
      721 cgcaccagcg cgctcaggct ggagtcaccg gtaccgaagt tgtccaggct caggctgatg
      781 ccttcattgc gcaggttggc cagcgtctcg tgcacgaaat tgacgttgtt ggtcagcgcg
      841 ctttcgttga tctccagcgt cagcatgtgc gccggaacac cggcggcctg catcagcgac
      901 atcacctcgg cgaagaagtt cggccgcagc agctgcaagg tcgagacgtt caccgcgatg
      961 gtgaagtcat cgaagccctg gtcgcgccac aggcgcgcct gcttcaacgc gccttccagc
     1021 acccatgtgc cgatctgcac gatgatcccc agccgctcgg cggtacgcat gaagcgctcg
     1081 ggcaccagca tgcccagcgt gggcgactgc cagcgcagca gcgcctccat gcccaccacg
     1141 tggccgtcgc gggcgctgac cagcggctgg tagcgcagct tcagctcgcc gttgggaatc
     1201 gcatcgacga tctgccgcgc gatgatgctc tcgctgtgcg cgctgggcgg ggtatccacc
     1261 gcgtggatgc gcaccgcgtt gccgccttcg cgcgcggcct ggtacagcgc gtcttcggcg
     1321 tggtcaagca ggcgcgaagt gctgctggca tgttcggggc acaggctcac gcccagcttg
     1381 ccggtcatga acagcgtgta cggcagcacc gacagcggca gctccatctg ctgccggatc
     1441 tcctcggcga agtcttccgg tagcggcacg tcggcggtgc gcggtaccgc gatcaggaat
     1501 tcgtcgctgc cgtggcgcca caacttgcca cgcccgcgca ggtaggactg caggcgctgc
     1561 gccaccagca ccagggcctg gtcgcccact tccgcgctca tgttctcgtt caccgaggcg
     1621 aagtggtcga tgtccacatg catcagcatc agcgcggtac cgcccgaagc cgcgtcggcg
     1681 accatcgcct gcagctcggg attgccggcg ccaaggcggt cgggtgcatc gtcgatgctg
     1741 accgggggca ggttgggatt ccacataggc tcagtattcc ggtgactcaa cggcggccat
     1801 gccggccgcc tggtagggga ggtggacgtc gacgagggtg ccttcgccat gcgcggactc
     1861 gatccgtaca tggccaccga cactctgcgc gcgctcgcgc atcacgatca ggccaagccc
     1921 gcgcggtcca tccgggtcga aaccttcgcc gtcatcgcgg atctgcagat gcaggccgcg
     1981 ttgcccgacg tcacgcagct gcagctgcac ctggctggcg cgcgcatggc gcagcacgtt
     2041 ggtcaggctc tcctgcgcga tgcggaagca ggcctgttcg atgctgttgt ccgggcgatg
     2101 cggcagcggc tcgatctcgg ccagcagttc aaccggcgag gaccggaaca gcacgcgtgc
     2161 ctgccagctc agcgcggcct ccagccccag tgcgtccagc tgcggcgggc gcagcagggt
     2221 ggagatatcg cgcagcttgg ccacggtggt gtcggccagg ctgacgatct gcgccaggtc
     2281 ctcggcgcgg cgctgcgggt catcttcgtc ctgcgccgca taggccgaca gcttgatcgc
     2341 ggtgatcgcc tggccgatgt cgtcgtgcag gtcgcgcgag atcgcgcggc gctcgtcctc
     2401 ctgcagcgag aacaggcggc cggccatcgc ctgcagctcg cggttgctgg tttccagtgc
     2461 gctgcgggtg cgctcggaat cgctgaggtc gcgcacgatc aacagcttgc agtcgcggcc
     2521 gccatagcgc acttcaccca ccgccagccc ggcatggaag ctgcggccgt cggcgcgctg
     2581 catcgccacc acgctgctgt gcccggggcc caggtgcggc tgcccggcgc gcagctggct
     2641 gcgcacccgc gccaggtcac ctgcagcgac cagcgctgac agcggctcgc ccagcagggt
     2701 gtggctgcca tagccgaaca ggctggcggc ccacgcattg gcgtacagca cgtgttcgtc
     2761 ggacagaatc accacgccat cgggcagcac ccgcaccagc tcgcggaact gttcctcgcg
     2821 ctcgcgcagc aggcgccgcg attgttcgcg ctcggtcacg tcctgcaggg tgcccagcac
     2881 gcggctgcgg ccggactcat caatgccact ggcggcgcgc aggtgcacca tcaatgcacg
     2941 gccgtccatc gacagcagcg gcagcagcac gtccacctgc accgggtcgc cggagcacag
     3001 ctcggacagc agctgttcgg tctgggtggc ggtggccggg tcggccggca ccagcagttc
     3061 gtcgaaacgg tgccagcggc gcgcctcggg cgggcggcgg ccgagcaggc gatagacctg
     3121 gttggaatag cggcccaggg ccgtggacgg gtccagctcc catgcgccga tgcgggccag
     3181 ctcgtgcgcc tcttccaccc gcgccagtgc ctggtcacgg cgcagctggg ccaggtcctc
     3241 ggcggtgcgg tcgatggcga tcagcaggcg ggcattgtgg ccgtcgtagc tgatcgcatt
     3301 ggaacgcagt tccatctgcc gcaggctgcc gtcacgcaac tgcagctgcg tgcgcaggat
     3361 gcacagttcc tccggcgcct cgcggattgc ttccagcttg gtctgcaggg cctggtcctg
     3421 gcctggcggc cacagcgcat cgatggtctg ctccagcaat tcgtcgcgtt cccagccgaa
     3481 ggtcacgcag gcggcagggt tggcatcgag gatggccagc gtatccaggt cgtagaccag
     3541 gatcgggccg ggattgccct cgaacatctg ccgcagccgc agttccgacg cctgctgccg
     3601 ggcatgggtc tgcagcacgt gctcggccag cgggcgcaac agcaggtaca gcagcccggc
     3661 gctggccagg gcgaagaatg cacccttcag gccctgccac agcgcggcct gctgcgggtc
     3721 gggcaccagt gcctgcaccg cgccgtcggt cgcgatcatc caggccagcg ccatcaccag
     3781 gtagctcagc accacccgcc gccggtcgcg gctcagcgcc tgcgccatcc gcgggtcgga
     3841 aacaggggcc ttgccggtag ggtctgcggg catggatggg agggatgaaa ggggcgccgg
     3901 ccatcttacc gcgcgggtgt gccctgacca ctcaattatc cgccgcaggc gccgttaacc
     3961 actgcgtgcc ccgctgacgg gcgtgtcatc cggagcaaga tcgcgtggac caagggatca
     4021 tcgccagcct gctgcagcac ccgcttgcgt cggcgctggt catcgtcgac cgtacgggac
     4081 gcccgttggc ggccaatccg gctgcgcgcg agcatggcct gccggccact gtggccgcct
     4141 atgcgccgat gctggaagat ctgcgcctga tggccgccga tggcggcatc gtggcctgta
     4201 cgctgcccgg cggcccgcgc ggtcactacg acggccacct gcgcgccgtg cacgatggcg
     4261 ccggcaacct gctggcgttc acgctgagcg ttcccgagcc aacgccgatc gatggcggcg
     4321 ggcgctggga gctggcgctg gacagtgccg gccacagcct gtgggattgg gatattccca
     4381 gtgaccgcgt ggcgcgaacc ccggcgctcg gcgatgagac cgccaccgag atgttgtcac
     4441 gcgtccacag cgaggacatc ggccaggtgc gtgcggcact ggaccagcat ctgcgcgggc
     4501 agagcgagca gtacagcgcg cagttccgct tccgccaggc cgatggccag tggcgctggg
     4561 tcctggaccg ggggcgcgtg gtcgcgcgta cggccgatgg ccagccgctg cgcatggtcg
     4621 gcacgcatac cgatatcgag cagcagaagc agctggaatc gctgctgcag gaacagcagc
     4681 tgcacctgag cgaggcgcag cgcatcgcca gcatgggcag ctggtcgttt gatccgacca
     4741 ccggtcactt ctggtggtcg ccggaactgc gctcgctgct ggcgctggag cagggcgccg
     4801 tgcccggcca gcggcgctgg ctcaagcagt tgcacccgcg ctcgcgcggc gccctgcgcg
     4861 cggcctggcg gcggttgtgg cgcgatggtc gcgccgccaa cctggagctg gagctgaccc
     4921 gcggtaacga gccctcgcag cacctgcggc tgtggatgca gccgctgatg gacatggagg
     4981 ggcagcccaa gcgactgctc ggccaggtcc agaacatcac cgaacagcac cagaccgatg
     5041 cgctgatccg ttggcgcact gaactgctga accgcgtttc cgcactgggc cgcatcggcg
     5101 gctgcgagat cgaggtgcag acccggcaca tgcagtggac cgaggagtgc tatcgcatcc
     5161 acggcctgcg caaggagccc atcaccctcg accaggcgct ggcgctgtac accgaggatt
     5221 cgcgcagcgc gttcgaggcg gcgttggtgc ggatcgccaa tggcgggctg cccgagcagc
     5281 tggacctgtg cttctaccgc cagtccggcc tgcgtgtctg ggtgcaggtg ctggtcgagc
     5341 tggaccgccg ggatgggctg ccgccgcgct tcgtggtgct gttccgtgac atcacccgcg
     5401 agcgcgaagc caacgagcgc atcgagctgc tggcgcatta cgatctgctc accggccttc
     5461 caaaccgtgt gctgctcggc gagcagaccg ccgaagccat cgaggaagcg cgcgaccgcg
     5521 gcacctcgct ggcaatgctg ttcatcgatc tggacggctt caagaccatc aacgacagct
     5581 tcggccacgc cactggcgat gcgctgctga aggcggcggc cacccggttg caccagaacc
     5641 tgcgtaacaa cgatctgttc gggcgtttca gcggtgatga gttcatcgtc gtgctgcgcg
     5701 acctggccga gccggaagac gccggccacg tggcacgcaa gctgattgcc tcgctggccg
     5761 agccgctgcg ccgtggcgag accacgttga aggtgggtgc cagcgtcggc attgcgatgc
     5821 tgggtgatgc acagaccgac ttcgattcgc tgctgcgcgc ggccgacgcc gcgatgtacg
     5881 cggccaagga agccgggcgc aacacctacc agtactacag ccaggacgca ctggcccgga
     5941 tccagcgcaa gcttgaactg gagcatgcgc tgcacggcgc catcgaacgc gaagagttca
     6001 gcctggccta tcagccgctg ctgcacgcac accagggcga accgccggcg atcgaggcgc
     6061 tgctgcgctg gcatcgtccg ggcatcggct attgcagccc ggccgagttc attcccattg
     6121 ccgaaaagtg cggcgagatc gtgcgcatcg gcgactgggt gctgaacgag gcctgccggc
     6181 aggcgacagc ctgggaccac gctggcctgc gtttcgatcg catcgcagtc aatgtgtcgg
     6241 cggtgcagct gcgtgaccgt ggtttcgccg agcgtgtgat cgaaatctgc cacgcacacg
     6301 gctggccgcc gcaacggctg gagctggaac tgaccgagtc tgcgctgatc cgtgacaccg
     6361 acatcctgcg ccactgcttc gacgtgctgg aacggcacgg cgtgcccctg gcggtggatg
     6421 acttcggcac cggcttctcc aacctcaact acctcaaccg tttcccggtg gggcgcctga
     6481 agatcgaccg cagcttcgtg cagggcatgc tgcatgactc gggcacggcc gaagtgaccc
     6541 aggccatcgt gcatctgggc cacgcgctgg gcatgaaggt ggtggccgaa ggcgtggaaa
     6601 cgcaccagga agaagacatg ctgcgccgcc agggctgcga cgagatccag ggctacctgt
     6661 actcgcgccc gctcagcccg cgtgacctgg cgcagtggct gcgccagcag cacccgtcac
     6721 cgatgcgcac cgacgccagc ggcgaagtgg tgctggtgcg ctgaccgcat ctggaccggc
     6781 tctggtgggt gccgaccttg gtcggcactg acgcctgcac gcgcaatcat ccacgcatgg
     6841 cgtggatcta cttcacgcat cggccttggt cggcacggat gcccgcgctc gcgatcatcc
     6901 cc
//
LOCUS       DAOKIP010000205         6822 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.206,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000205 DAOKIP010000000
VERSION     DAOKIP010000205.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 6822)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6822)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6822
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.206"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            73..2220
                     /locus_tag="QEL58_003379"
     CDS             73..2220
                     /locus_tag="QEL58_003379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019337940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S46 family peptidase"
                     /protein_id="HDS1677813.1"
                     /translation="MSPRKALPTALALGLTLAAGAHADEGMWMPTQLPELAKPLQAAG
                     FKGNPADLANVTAPPLSAVVRAGGGTGSFVSADGLLLTNHHVAMGVIQYNSSPEHNLI
                     DNGFIANGRADERPANPDFRVLVTVGFDKVTDQVLAQARGKTGRAYFDAVDAASKQIV
                     AECEKDGSVRCSVANMYYGTDFYRIAQLELSDVRLVYAPPRAIGNYGDEIDNFMWPRH
                     TGDFTLLRAYVGKDGKPAAYSKDNVPYQAPAHLQMSVEGPKEGDYAMLAGYPGITYRH
                     RTAAEFAGQIDAVLPRRVSVFQQMIDTIEAASAKDAQARTRYASQLQSLKNNRKRAAG
                     ELEGLLRSDAKAQRAADESAMLAATDRRYQGDIKALLANLSQGAAVGERDLLLDQMAM
                     QSQLLRSALLLERLRIESAKPDAQRESGYQQRDQAMIEGVLKQVQRRYAPEVEKALLT
                     TLLTRYQQLPDAQRVAEFDAAFGRTPQQLAKALDTLYAGTQLGDEAQRLSRFAAAREG
                     KALAADPLIAVAGPLVAAQLRIENESKTREGEQLRLRPAYMQALFAWRAKQGRAVYPD
                     ANRTLRISYGKVEALHPRDGVTYSPVTTVAGIVEKNTNAYPFDAPKPLLAAIAKGDFG
                     STADPALKTQTVNFLTNLDTTGGNSGSPVLNAKGELIGLNFDSNWESVSASWWFDPRY
                     KRAVHVDMRYLRWLLAKVYPAPELLKEMGVPAQ"
     gene            2356..5802
                     /locus_tag="QEL58_003380"
     CDS             2356..5802
                     /locus_tag="QEL58_003380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014038980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hybrid sensor histidine kinase/response
                     regulator"
                     /protein_id="HDS1677814.1"
                     /translation="MVSSWILLLVSVAYAALLFGVAWWGDRRPMYPDRPWLRPVVYSL
                     ALAVYCSSWTFYGAVGTAVRNGVGYLPIYIGPLLLLLFGWRIIERLALIARSQNVVSI
                     ADFISSRFGRSRRLAALVAIIALIGIIPYLALQYKAVAMSLQVLTGNTGPTGFFSDPA
                     LYVALLMALFATLFGTRQVDATEHHHGMMLAIALESVIKLVAMVAVGVFAYVWLSDRN
                     EAVVESVHTLFTGLPPVGFLSQTLLSFLAIICLPRQFHVAVVECGDVRDVRRARWMFG
                     GYLVLISAMVLPIATAGVSLFGTGSGVADDSMVLALPLAEGRNTLALIAYIGGFSAAT
                     GMVIVSSIALATMVSNDLVMPVLLRRSGDHQEAADVASRVLWIRRLAILLLALMAYSY
                     YRSSSNDSTLASYGLMAFAAVAQFAPGLIGGLYWRGASRRGVEAGMLLGFGTWLYTLL
                     LPAMTMAGWMDAGWVQNGPFGITWLRPQQLFGMTGWDPLTHGTFWSLLVNAATMMLVS
                     ARWRPGVDERLRAAPFLDPYAERPSVAGGWPGHVHVGDLLALASRVVGERHARRAFFE
                     QAQSLGRELQSSAPADRPWVQFTERLLAASIGAASARLLLTSLLRGSGMDLGEVVAVL
                     DEAGQELRFNREILSTTLENISAGVSVVDPDMRLTAWNRRYQDMFGYPDGMLYVGRPV
                     ADLIRYNAERGELGEGDIEIQINRRIGYMRAGSPHVFERTRSDGKVIEMRGQALPGGG
                     YVTSYNDITDYKHAEKALLEANETLEQRVAERSHEAEVAQQSKTRFLAAISHDVLQPL
                     NAARLFASALRDSDHVSDEQKHLAERVDASLRAAEELLDGLLDVSRLDAGGLHPVIGE
                     FDVSALMRELAAQYTPVAAGRGLRLDLFARPAWVRSDRRLLRRVLQNFLANALRYTRQ
                     GRIVLAVRHRGDEVELQVWDTGPGIPEHHMRQIFDEFHRYQQPFDWGEQGLGLGLSIC
                     QRISRLLDHRLNARSRVGKGSMFSIILPRVAPLPGYTELATPAQAVAAPVRSDSLAGL
                     RVLCVDNDEEILDGMRALLGRWQVQVITAATVDQALEKIAERPQVMLVDYHLHDRMDG
                     LDALVALRDAAGYPLPGALLTADGRDELKRMARERGYRVLTKPIKPASLRAFLGALRD
                     AQ"
     gene            complement(5895..6470)
                     /locus_tag="QEL58_003381"
     CDS             complement(5895..6470)
                     /locus_tag="QEL58_003381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019337938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="manganese efflux pump MntP family protein"
                     /protein_id="HDS1677815.1"
                     /translation="MSPVSILLIGFAMSTDAFAAAIGKGAAMRKPVFRDALRAGIIFG
                     VIEAITPIIGWLLGRAALQYVEAFDHWIAFGLLGALGIHMIYNGLRPDSAEEEEDPSQ
                     HYGFWKLALTGFATSIDAMAVGIGLAFMDVHIGVMAAVIGLCTLTMVTAGIMLGRVLG
                     SMVGKRAEIIGGVILVIIGATILYEHLHGVG"
BASE COUNT         1097 a         2294 c         2324 g         1107 t
ORIGIN      
        1 aaccatcggc cgttgccccg gccgccccca gcggctatgg tcccgggctg ttctgtcgta
       61 ccggattgcc ccatgtcacc acgcaaagcc cttcccaccg ccctggccct cggcctgacc
      121 ctcgccgccg gtgcccacgc cgatgaaggc atgtggatgc cgacccagct gccggaactg
      181 gccaagccgc tgcaggcggc cggtttcaag ggcaatccgg ccgacctggc caacgtcacc
      241 gcgccgccgc tgagcgcggt ggtgcgtgcc ggcggcggca ccggttcgtt cgtgtccgcc
      301 gacggcctgc tgctgaccaa ccaccacgtg gcgatgggcg tgatccagta caacagctcg
      361 cccgagcaca acctgatcga caacggcttc atcgccaacg gccgcgccga tgagcgcccg
      421 gccaacccgg acttccgcgt gctggtcacc gtcggcttcg acaaggtgac cgaccaggtg
      481 ctggcgcagg cgcgcggcaa gaccggccgt gcctacttcg acgcggtgga tgcggccagc
      541 aagcagatcg tggccgagtg cgagaaggac ggcagcgtgc gctgctcggt ggccaacatg
      601 tactacggca ccgacttcta ccgcatcgcc cagctggaac tgagcgacgt gcgactggtc
      661 tacgcgccgc cgcgtgcgat cggcaactac ggcgacgaga tcgacaactt catgtggccg
      721 cgccacaccg gcgacttcac cctgctgcgt gcctacgtcg gcaaggatgg caagccggcc
      781 gcctacagca aggacaacgt gccctaccag gcaccggcac acctgcagat gtcggtggaa
      841 ggcccgaagg aaggcgatta cgcgatgctg gccggctacc cgggcatcac ctaccgccac
      901 cgcaccgccg ccgaattcgc cggccagatc gatgccgtgc tgccgcgccg cgtgtcggtg
      961 ttccagcaga tgatcgacac catcgaagcc gccagcgcca aggatgcaca ggcgcgcacc
     1021 cgctacgcct cgcagctgca gtcgctgaag aacaaccgca agcgcgccgc cggtgaactg
     1081 gaaggcctgc tgcgcagcga tgccaaagcc cagcgcgccg ccgacgaaag cgcgatgctg
     1141 gccgccaccg accgcaggta ccagggtgat atcaaggcgc tgctggccaa cctgtcgcag
     1201 ggtgcggcgg tgggcgagcg tgacctgctg ctggaccaga tggcgatgca gagccagctg
     1261 ctgcgctcgg cattgctgct ggagcgcctg cgcattgagt cggccaagcc cgacgcgcag
     1321 cgcgagagcg gctaccagca gcgcgaccag gcgatgatcg aaggcgtgct caagcaggtg
     1381 cagcgccgct atgcgccgga ggtcgagaag gcgctgctga ccaccctgct gacccgctac
     1441 cagcagctgc cggatgcgca gcgcgtggcc gagttcgacg ccgccttcgg tcgtaccccg
     1501 cagcagctgg ccaaggcatt ggacaccctg tacgccggca cccagctggg cgacgaggcg
     1561 cagcgcctgt cgcgctttgc tgccgcccgc gaaggcaagg cgctggccgc cgatccactg
     1621 atcgccgtgg ccggcccgct ggtggccgcg cagctgcgca tcgagaacga gagcaagacc
     1681 cgcgaaggcg agcagctgcg cctgcgcccg gcctacatgc aggcgctgtt cgcctggcgt
     1741 gccaagcagg gccgcgcggt gtacccggat gccaaccgca ccctgcggat cagctacggc
     1801 aaggtggaag cattgcatcc gcgcgatggc gtgacctact cgccggtgac cactgtggcc
     1861 ggcatcgtcg agaagaacac caacgcctat ccgttcgatg cacccaagcc gctgctggcg
     1921 gcgatcgcca agggtgactt cggcagcacc gccgatccgg cgctgaagac ccagacggtc
     1981 aacttcctga ccaacctgga caccaccggc ggcaattccg gctcgccggt gctcaacgcc
     2041 aagggtgaac tgatcggcct gaacttcgac agcaactggg aatcggtcag cgccagctgg
     2101 tggttcgacc cgcgctacaa gcgtgccgtg cacgtggaca tgcgctacct gcgctggctg
     2161 ctggccaagg tctacccggc gcccgagctg ctgaaggaaa tgggcgtgcc ggcccagtaa
     2221 gaagccggcc acgaccaacg gtcgtggccc gcaccgcgta ggcccccacc ttggtggggg
     2281 tggttgcccc caacgagccc gtacacccgg ccatgcctgg cctacactgc gggttcctcc
     2341 gacggaaaca cgcgcgtggt ctccagctgg atcctgctgc tggtctcggt tgcctatgcc
     2401 gcgctgctgt tcggcgtggc gtggtggggt gaccgccggc cgatgtatcc cgaccggccg
     2461 tggctgcggc cggtggtcta cagcctggcg ctggcggtgt actgctcgtc gtggaccttc
     2521 tacggcgcgg tcggcaccgc cgtgcgcaac ggggtgggtt acctgccgat ctatatcggc
     2581 cccttgctgc tgctgctgtt tggctggcgc atcatcgagc gcctggcgct gatcgcgcgc
     2641 agccagaacg tggtctccat cgccgatttc atctcttcgc gtttcggccg ctcgcggcgg
     2701 ctggcagcgc tggtggcgat catcgcgctg atcggcatca ttccgtacct ggccctgcag
     2761 tacaaagcgg tggcgatgag cctgcaggtg ctgaccggca acaccggccc gaccggcttc
     2821 ttcagcgacc cggcgttgta cgtggccctg ttgatggcgc tgttcgccac cctgttcggt
     2881 acccgccagg tcgatgccac cgagcatcac cacggcatga tgctggccat tgcgctggag
     2941 tccgtgatca agctggtggc gatggtggcg gtgggcgtgt tcgcctacgt ctggctcagc
     3001 gaccgcaacg aagcggtggt ggagtcggtg catacgctgt tcaccggact gcctccggtg
     3061 ggtttcctgt cgcagacgct gctcagcttc ctcgccatca tctgcctgcc gcgccagttc
     3121 cacgtagcgg tggtcgagtg cggggatgta cgcgacgtac gccgtgcgcg ctggatgttc
     3181 ggcggctacc tggtgctcat ctcggcgatg gtgctgccga tcgccaccgc cggtgtcagc
     3241 ctgttcggta ccggcagtgg cgtggccgat gactcgatgg tgctggccct gccgctggcg
     3301 gaaggacgca acacactggc gttgattgct tacatcgggg gcttttccgc ggcgaccggc
     3361 atggtgatcg tgtcctcgat cgcgctggcc accatggtca gcaacgatct ggtgatgccg
     3421 gtactgctgc gccgaagtgg tgatcaccag gaagccgccg acgtcgcctc gcgcgttctg
     3481 tggatccgcc ggctggcgat cctgctgctg gcgttgatgg cctacagcta ctaccgcagc
     3541 agcagcaatg acagcaccct ggccagctac ggcctgatgg cgttcgctgc cgtggcgcag
     3601 ttcgcaccgg ggctgatcgg cggcctgtac tggcgtggcg ccagccgccg cggcgtcgag
     3661 gcgggcatgc tgctgggctt cggcacgtgg ttgtacacgc tgctgctgcc ggcgatgacg
     3721 atggccggct ggatggacgc cggctgggtg cagaatggcc cgttcggcat cacctggttg
     3781 cgcccgcagc agttgttcgg catgaccggt tgggacccgc tgacccatgg cacgttctgg
     3841 tcactgctgg tcaatgcggc gacgatgatg ctggtgtccg cgcgctggcg accgggcgtg
     3901 gacgagcggc tgcgcgccgc gccgttcctc gatccgtatg ccgagcgccc ctcggtggcc
     3961 ggtggctggc ccggtcatgt gcacgtgggc gacctgctgg cgctggcctc gcgcgtggtc
     4021 ggtgaacgcc acgcgcggcg cgcattcttc gagcaggcgc agtcgctggg gcgcgagctg
     4081 cagtcctcgg caccggccga ccggccctgg gtgcagttca ccgagcgcct gctggccgca
     4141 tcgatcggcg cggcgtccgc gcgcctgctg ctgaccagcc tgctgcgcgg ctcgggcatg
     4201 gacctgggcg aagtggtggc ggtgctggat gaagccgggc aggagctgcg tttcaaccgc
     4261 gagatcctgt cgaccacgct ggagaacatc agcgccggag tcagcgtggt cgatccggac
     4321 atgcgcctga ccgcctggaa ccgtcgttac caggacatgt tcggttaccc cgacggcatg
     4381 ctttacgtgg ggcgcccggt ggcggatctg atccgctaca acgccgagcg tggcgagctt
     4441 ggcgagggcg acatcgagat ccagatcaac cgccgcatcg gctacatgcg cgccggttca
     4501 ccacacgtgt tcgagcgtac ccgcagcgac ggcaaggtga tcgagatgcg tggccaggcg
     4561 ctgcccggtg gcggctacgt caccagctac aacgacatca ccgattacaa gcacgcggaa
     4621 aaagccctgc tggaagccaa cgagacgctg gaacagcgcg tggccgagcg ctcgcacgag
     4681 gccgaggtcg cgcagcagtc gaagacccgc ttcctggcgg cgatcagcca cgacgtgctg
     4741 caaccgctga atgccgcgcg cctgtttgct tccgcgctgc gtgacagtga ccacgtcagt
     4801 gacgagcaga agcatctggc cgaacgcgtg gatgcctcgc tgcgtgccgc cgaggaactg
     4861 ctcgatggtc tgctggatgt atcgcggctg gatgctggcg gcctgcaccc ggtgatcggc
     4921 gagttcgacg tgagcgcgct gatgcgggag ctggccgcgc agtacacccc ggttgccgct
     4981 ggccgtggcc tgcgcctgga cctgttcgcg cgcccggcgt gggtacgcag cgaccgccgc
     5041 ctgttgcgcc gcgtgctgca gaacttcctg gccaacgcgc tgcgctatac ccgccagggc
     5101 cgcatcgtgc tggcagtacg ccaccgtggt gacgaagtgg agctgcaggt gtgggatacc
     5161 ggccccggca ttcccgagca ccacatgcgg cagatcttcg acgaattcca ccgctaccag
     5221 cagccgttcg actggggcga gcagggcctc ggcctgggcc tgtcgatctg ccagcgcatc
     5281 tcgcgcctgc tcgaccatcg gttgaacgca cgcagccggg tcggcaaggg ctcgatgttc
     5341 tcgatcatcc tgccgcgggt ggcgccactg cccggataca ccgagttggc cacgccggca
     5401 caggccgtgg ccgcaccggt acgcagcgat tcgctggccg ggctgcgcgt gctgtgcgtg
     5461 gacaacgacg aggaaatcct cgacggcatg cgcgcgttgc ttggccgctg gcaggtgcag
     5521 gtgatcaccg ccgcgaccgt cgaccaggcg ctggagaaga tcgccgagcg tccgcaggtg
     5581 atgctggtgg actatcacct gcacgaccgc atggacggcc tggatgcact ggtggccctg
     5641 cgcgatgcgg cgggctaccc actgcccggt gcgctgctga ccgccgacgg ccgcgatgaa
     5701 ctgaagcgca tggcgcgcga gcgcggctac cgcgtgctga ccaaaccgat caagccggcc
     5761 tcgctgcgcg ccttcctggg cgcgctgcgc gatgcgcagt agtgccggcc gcccggcagt
     5821 agatccacgc catgcgtgga tgtgacgtct ggtagtgccg gccgctggcc ggcaaccacg
     5881 caatcgcggg cgcgttaccc cacgccatgc aggtgttcgt acaggatcgt cgcaccgatg
     5941 atcaccagga tcacgccgcc gatgatctcg gcgcgcttgc cgaccatgct gcccagcacg
     6001 cggccgagca tgatgccggc agtgaccatg gtcagcgtgc acaggccgat caccgcagcc
     6061 atcacgccga tatgcacgtc catgaaggcc aggccgatgc ccactgccat cgcgtcgatg
     6121 ctggtggcaa agccggtcag cgcaagcttc cagaagccgt agtgctgcga aggatcttct
     6181 tcttcctcgg cactgtccgg gcgcaggccg ttgtagatca tgtggatgcc cagcgcgccg
     6241 agcagaccga aggcgatcca gtggtcgaag gcttcgacgt actgcagggc ggcacggccg
     6301 agcagccagc caatgatggg cgtgatcgct tcgatgacgc cgaagatgat gccggcgcgc
     6361 agcgcatcgc ggaacaccgg cttgcgcatg gcggcaccct tgccgatcgc cgcagcgaag
     6421 gcatcggtgg acatggcgaa gccgatcaag aggatcgaaa caggagacat ggcggcagcg
     6481 gaaggtcggg ctaggacgga cgcacggcct gcgctcgcgc ccaacctggt gttgcgcgcg
     6541 cgggccgctg gtctcgccaa ccatcatggt tgtccacgcc acggcgcact ggccgagtat
     6601 gttgacgtgg acgattcctg cgaaggaatc cggctactcc ccaaggggac gcgaagctta
     6661 gcaccgcgat ccgcgcgtgg cgcgtttcca acgaaacgcg caggcagggc tggtttgtat
     6721 agcgatggct ataccgcgag cgcagtggtg cctggtagtg ccggccgctg gccggcaggt
     6781 gcaacgtcaa aagcgtgcca agcaagcttg gcacctaccg ga
//
LOCUS       DAOKIP010000206         6818 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.207,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000206 DAOKIP010000000
VERSION     DAOKIP010000206.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 6818)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6818)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6818
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.207"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            151..633
                     /locus_tag="QEL58_003382"
     CDS             151..633
                     /locus_tag="QEL58_003382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010482989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HDS1677816.1"
                     /translation="MKIEKDRVVRFHYTVSEVGQEPIESSKDRGEPLAILIGHGNIIP
                     GLENAMMDKEAGATFSVDVTAADAYGERREGLSQRVPKKHFGNTKLAPGQQVVLQTNF
                     GPRAVTVQKVGMSVVDVDLNHPMAGKDLHFDVEIVDVREAGQEEIDHGHVHGDGGHHH
                     "
     gene            733..1977
                     /locus_tag="QEL58_003383"
     CDS             733..1977
                     /locus_tag="QEL58_003383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF418 domain-containing protein"
                     /protein_id="HDS1677817.1"
                     /translation="MADLPDGCPVNAASPSLQPMASGERIAVLDILRGAALLGILLMN
                     IEAFSGPLDLAFTGIDVHWQGIDYWADAFVYVFVQGKFFTLFSLLFGAGFAVMAQRAD
                     VAGRNFTPFYLRRSAGLLLIGLCHALLVWSGDILVMYALISLPLLACREAPRSWLPWM
                     GVIVYLGGVAMMLLVGAMVSMASAEEVQGMLGEAQQSIALQRQVYGQGSWAQATVQRL
                     SEFGTSMGALLITGPEVLGMFLIGSWFAGSGALAAPERFPRLYASLRWIALPLGLLVT
                     VLGVAWKPYLAPGAYDLPVTAAMALVTIGGLPMCLGYLAWIVHWRTRLAWLAPVGRMA
                     LTHYLGQSLLCTWVFYHYGLGRFEMMPRSVQMLFALLLFAVQVGISHVWLRHFRFGPM
                     EWLWRAMTYRQWPPMRRGAGLG"
     gene            1981..3231
                     /locus_tag="QEL58_003384"
     CDS             1981..3231
                     /locus_tag="QEL58_003384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019338613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HDS1677818.1"
                     /translation="MPRAREDVIVVGAGAIGLASALALRAQGRQVRVIDRGRVGGATS
                     HGNCGTITPSHAPPLAAPGVPLRALRWMLDPRAPLYVRTRLDPTLWRWLLQFGARCNA
                     RDWLQSTRARGALLDDSRQRLADWVQAHALDCEFDARGLDYVFGDARNFDHHVAECEA
                     LNAQGIATTCIGGADYARANPAFHDHLAGAIHFPGDAQLRPDRYTAELARVLRAQGVV
                     IDEQVDVQGFSDDAQGVRVQADGQSLAARELVLATGPWSRHWARQLDLRVPIQPGKGY
                     SLTWSRPALVPQRPVVLKDHSVFVIAWREALRLGGTMEFAGADPSLRATRLRALQQAA
                     DHYLRAPCGAQLQEQWCGWRPMSVDDVPLIGRAPAHPHVWLAAGHGMLGISMSAGTGQ
                     LIADLVCGRTPAIDPAPYRPERFR"
     gene            3228..4586
                     /gene="gorA"
                     /locus_tag="QEL58_003385"
     CDS             3228..4586
                     /gene="gorA"
                     /locus_tag="QEL58_003385"
                     /EC_number="1.8.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione-disulfide reductase"
                     /protein_id="HDS1677819.1"
                     /translation="MSTAPYDYDLIVLGGGSAGLAGAIRAAQHGKRVAMLEPGELGGT
                     CVNVGCVPKKAMWLAADLHERIGLASAMGFDVEARPALSWKELVIHRQAYISNIHTSY
                     HKRLDETGVVRIPARGHLLDAHTVACSDGVRYSAEHILIATGAHPLRPDIPGAELGLV
                     SDDFFDLRAAPADVAIIGGGYIAVELAGLLQALGSRVSLLVRGKRLLERFDYELTDQL
                     AENLKQQGVRIHFDYRLRELQRDGERVRAFGHDGPLDSVFDAVFFATGRRGNSRDLGL
                     EALGIGIGEHQQVQVDEWQTTSVPSVHAVGDIAGKVGLTPVAVAASRRLMDRLFGGRP
                     QSKMDYENVASVVFSHPPLGAVGMSEEEARARFEQVSVYHSRFRPMLQALANGTQRSL
                     FKMVCAGPEERVVGIHLLGEAADEILQGFAVAVKMGATKAQFDDTVAIHPTSAEEVVL
                     MR"
     gene            4773..5693
                     /locus_tag="QEL58_003386"
     CDS             4773..5693
                     /locus_tag="QEL58_003386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014038005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HDS1677820.1"
                     /translation="MSSPASRIATASPRIALGGIGLAAIGAIAASGKAIIVKLGLRHG
                     VDATTLLALRMLMALPLFVLMALWAARRAAPLSWADRARVLWLGFTGYYLSSLLDFQG
                     LQYISVTLERLILYLNPTLVLLINVLLARQRPGRWQVGALVLSYLGVLLAFGHDLQRE
                     GGQIIVGSLLVLGSALSYALYLFGSGQVVARIGAVRLTAYASCVASVLVLLHFAVTHP
                     LPLLWQAPAPVQWLSLANATVCTVLPVLAIMLAVQRVGSSLAAQVGMLGPVSTIVMSL
                     WLLDEPMGPAQIAGTVLVLIGVLLVTRLRR"
     gene            5720..6028
                     /locus_tag="QEL58_003387"
     CDS             5720..6028
                     /locus_tag="QEL58_003387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MGMT family protein"
                     /protein_id="HDS1677821.1"
                     /translation="MAVIRAIPAGQVMGYGQVAMRAGLPGRARLTARILGQNDDPDLP
                     WHRVLRSDGRIAMEEGSAGWREQSQRLRAEGVVVENGRVRMPATDPAAALDAAVWGPG
                     "
     gene            6122..6796
                     /locus_tag="QEL58_003388"
     CDS             6122..6796
                     /locus_tag="QEL58_003388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008267505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease"
                     /protein_id="HDS1677822.1"
                     /translation="MFPRLPTVTKALLIANAILFLLQQPFLLGMQTFEPFMLQPLQQG
                     FDAFSPGGNFQPWQLLTYGFLHGSFGHLFFNMLAVFMFGAPLEQTWGEKRFLLYYLVC
                     VAGAGVCQLLVGTLLENPATVLGASGGVFGLLLAYGMLFPNQRVMLLFPPIPMKARTF
                     VILFGVGELVLGMTGWQPGVAHFAHLGGMLFGWLLIRYWRGQPPFNKRRPPGPPNRPN
                     HLRSVK"
BASE COUNT          961 a         2237 c         2426 g         1194 t
ORIGIN      
        1 gagccggcgc aggccggacg aaactggcgt gatgtgcatg atctccggat aatgcgccac
       61 cttggattgg ccgtcatgat ggcggcgtcc ccgccgggcg acaacccgcc ccaacccgcc
      121 tgcctccggc agatccagac agagttgcgc atgaagatcg aaaaagaccg cgttgtccgc
      181 ttccactaca ccgtttccga agtcggccag gagccgatcg aatcgtccaa ggaccgcggc
      241 gagccgctgg cgatcctgat cggccacggc aacatcattc cgggcctgga aaacgccatg
      301 atggacaagg aagccggcgc gaccttcagc gtcgacgtca ctgcggccga cgcctacggc
      361 gagcgccgcg agggcctgtc ccagcgcgtg ccgaagaagc acttcggcaa caccaagctg
      421 gccccgggcc agcaggtcgt gctgcagacc aacttcggcc cgcgtgcggt gaccgtgcag
      481 aaggtcggca tgagcgtggt cgacgttgac ctgaaccacc cgatggccgg caaggacctg
      541 catttcgacg tggaaatcgt cgatgtgcgc gaagccggcc aggaagagat cgaccacggc
      601 cacgtccacg gtgacggtgg tcaccaccac tgatcgcagc gcgatcgtga tggcagcaac
      661 ggcccgcttc ggcgggccgt tgcgtttctg gaacacggcg cgggcatcca tggcgcgtgg
      721 gccggcggca taatggcgga cctgcccgac ggatgccccg tgaacgccgc ttctccctcc
      781 ctgcagccga tggcttccgg cgaacgcatc gccgtgctgg acatcctgcg tggtgccgcc
      841 ctgctgggca tcctgctgat gaacatcgag gccttcagtg gcccgctgga cctggcgttc
      901 accggcatcg acgtgcactg gcagggcatc gactactggg ccgatgcctt tgtctatgtg
      961 ttcgtgcagg gcaagttctt caccctgttc tcgctgctgt tcggcgccgg ctttgcggtg
     1021 atggcgcagc gcgccgacgt ggccggacgc aatttcactc cgttctacct gcgccgcagc
     1081 gccgggctgc tgctgatcgg cctgtgccac gcgctgctgg tctggtccgg cgacatcctg
     1141 gtgatgtacg cgctgatctc gctaccgttg ctggcctgcc gcgaggcacc gcgcagctgg
     1201 ctgccgtgga tgggcgtgat cgtctacctc ggcggcgtgg cgatgatgct gctggtcggc
     1261 gcgatggtgt cgatggcctc ggccgaagag gtgcagggca tgctcggcga agcgcagcag
     1321 agcatcgcgc tgcagcgtca ggtatacggg cagggcagct gggcgcaggc caccgtgcaa
     1381 cgcttgagcg agttcggtac ctcgatgggc gcgctgctga tcaccggccc ggaagtgctg
     1441 ggcatgttcc tgatcggcag ctggttcgcc ggcagtggcg cgcttgccgc gccggagcgc
     1501 ttcccacgcc tgtacgcctc gctgcgctgg atcgcgctgc cgctgggcct gctggtcacg
     1561 gtgctgggtg ttgcctggaa accgtacctg gcaccgggtg cttacgatct gccggtaaca
     1621 gccgcaatgg cactggtgac gatcggcggc ctgccgatgt gcctgggcta cctggcgtgg
     1681 atcgtgcact ggcgcacgcg gctggcatgg ctggcgccgg tcggccgcat ggcgttgacc
     1741 cactatctcg gccagtcgct gctgtgcacc tgggtcttct accactacgg actgggcagg
     1801 ttcgagatga tgccgcgcag tgtgcagatg ctgttcgcgc tgctgctgtt tgccgtgcag
     1861 gtcggcatct cacacgtgtg gctgcgccac ttccgcttcg ggcccatgga atggctgtgg
     1921 cgtgcgatga cctaccggca gtggccgccg atgcggcgcg gagccgggct gggctgatcg
     1981 atgccgaggg cgcgcgagga cgtgatcgtg gtcggcgccg gggccatcgg cctggccagt
     2041 gcgctcgcgt tgcgcgcgca gggccggcag gtgcgcgtga tcgaccgggg gcgcgtcggg
     2101 ggcgcgacgt cgcatggcaa ctgcggcacc atcaccccca gccacgcacc gccactggcg
     2161 gcgcccgggg tgccgctgcg cgcgttgcgc tggatgctcg atccacgcgc gccgctgtac
     2221 gtgcgtacgc ggctggatcc cacgctgtgg cgctggctgc tgcagttcgg cgcacgctgc
     2281 aacgcccgcg actggctgca gtccacgcgt gcacgtggtg cgctgctgga tgattcgcgg
     2341 cagcgtctgg ccgattgggt gcaggcacat gcgcttgact gcgaatttga tgcgcgcggg
     2401 ctggactacg tgttcggcga tgctcgcaac ttcgatcacc acgtggccga atgcgaggcg
     2461 ctgaacgcgc agggcatcgc cacgacctgc atcggtggtg ccgactatgc gcgcgcgaat
     2521 ccggccttcc acgatcacct ggccggtgcg atccattttc ctggtgatgc gcagctgcgg
     2581 ccggatcgct acaccgccga gctggcacgc gtgctgcgcg cgcagggcgt ggtgatcgac
     2641 gagcaggtgg acgtgcaggg attcagcgat gacgcacagg gtgtacgcgt gcaggcggat
     2701 gggcagtcgc tggccgcgcg cgagctggta ctggcgaccg ggccgtggtc gcggcactgg
     2761 gcacggcagc tggatctgcg cgtgccgatc cagccaggca agggctactc gctgacctgg
     2821 tcgcggccgg cgctggtgcc gcagcggccg gtggtgctga aagatcattc cgtgttcgtg
     2881 atcgcctggc gcgaagcgct gcggctgggc ggtaccatgg aattcgccgg tgccgatcca
     2941 agcttgcgcg cgacccggct gcgtgcgctg cagcaggccg ccgaccacta cctgcgcgcg
     3001 ccatgcggtg cgcagctgca ggagcagtgg tgcggttggc gacccatgag cgtggacgac
     3061 gtgccgttga tcggccgtgc gcccgcgcat cctcacgtct ggcttgcagc ggggcatggc
     3121 atgctcggca tcagcatgag cgccggcacc ggccagctga tcgccgacct cgtctgcggc
     3181 cgcaccccag cgatcgatcc tgccccttac cgacccgagc gattccgatg agcactgcac
     3241 cctatgatta cgacctgatc gtccttggcg gcggctccgc cggcctggcc ggtgcgatcc
     3301 gcgccgcgca gcatggcaag cgggtggcaa tgctggagcc gggcgaactc ggcggtacct
     3361 gtgtcaatgt cggctgcgtg ccgaagaagg cgatgtggct ggcggccgac ctgcacgaac
     3421 gcatcggcct ggccagtgcg atgggcttcg atgtcgaggc ccgcccggcg ctgtcgtgga
     3481 aggaactggt gatccatcgc caggcctaca tcagcaacat ccacaccagt taccacaagc
     3541 gcctggacga gaccggcgtg gtgcgcattc cggcgcgcgg ccacctgctc gatgcgcaca
     3601 cggtggcctg cagcgatggc gtgcgctaca gcgccgagca catcctgatc gccaccggcg
     3661 cgcacccgct gcggccggac attccgggcg ccgaactggg cctggtgtct gatgacttct
     3721 tcgatctgcg tgcggcacct gccgacgtgg cgatcatcgg cggtggctac atcgcggtgg
     3781 aactggcggg cctgctgcag gcgctgggca gccgggtcag cctgctggtg cgtggcaagc
     3841 gcctgctgga gcgcttcgat tacgagctga ccgatcagct ggccgagaac ctgaagcagc
     3901 agggcgtgcg aattcatttc gactaccgcc tgcgcgagct gcagcgcgat ggcgagcgcg
     3961 tgcgcgcctt cggccacgac ggtccgctcg acagcgtgtt cgatgcggtg ttcttcgcca
     4021 ccggccggcg cggaaacagc cgtgatctgg gactggaggc actcggcatc ggcatcggcg
     4081 aacaccagca ggtgcaggtg gatgagtggc agaccaccag cgtgccgagc gtgcatgccg
     4141 tgggtgacat cgccggcaag gtcggcctga ccccggtggc agtggcggca tcgcggcggc
     4201 tgatggatcg cctgttcggt ggccgcccgc agtcgaagat ggattacgag aatgtggcca
     4261 gcgtggtgtt ctcgcacccg ccgttgggcg cggtgggcat gagcgaagag gaagcgcgcg
     4321 cgcgtttcga gcaggtgagc gtgtaccaca gccgcttccg cccgatgctg caggcgctgg
     4381 ccaacggcac ccagcgcagc ctgttcaaga tggtctgcgc cggcccggag gaacgggtgg
     4441 tgggcatcca cctgctgggc gaagcggccg atgagatcct gcagggcttc gcggtggcgg
     4501 tgaagatggg cgcaaccaag gcccagttcg atgacaccgt ggcgatccat ccgacctcgg
     4561 ccgaggaagt ggtgctgatg cgctgagccg ggccgttgta gagccgagcc atgctcggct
     4621 accgtgcgaa agcagtcgag catggctcga ctctacagaa ggcggcattc gggcacgctc
     4681 agcgctaccg gggcgggcac cggtcgcccc catgcgacaa tggccgcccc cacgccttcc
     4741 cgggccgccc cgcgcggccc gccgtcgtcc tgatgtccag ccctgcttcc cgtatcgcca
     4801 ccgcctcccc tcgcatcgcg ctggggggca ttggcctggc cgcgatcggc gccatcgccg
     4861 cctccggcaa ggcgatcatc gtcaagctcg ggctgcgcca tggcgtcgat gccaccacgc
     4921 tgctcgcgtt gcgcatgctg atggcgctgc ccttgttcgt gctgatggcg ctgtgggccg
     4981 cgcgccgggc cgcgccgctg tcctgggccg accgcgcccg ggtgctgtgg ctgggtttca
     5041 ccggctacta cctgtccagc ctgctcgact tccagggact gcagtacatc agcgtgaccc
     5101 tggaacggct gatcctgtac ttgaatccaa ccctggtgct gttgatcaac gtgctgctgg
     5161 cacgccagcg acccggccga tggcaggtcg gcgcgctggt gctgagctac ctcggcgtgc
     5221 tgctggcgtt cggccacgac ctgcagcgcg agggcgggca gatcatcgtc ggcagcctgc
     5281 tggtgctggg cagtgcgctc agctacgcgc tgtacctgtt cggcagcggc caggtggtcg
     5341 cgcgcatcgg tgcggtacgg ctgaccgcct atgccagctg cgtggccagc gtgctggtgc
     5401 tgctgcattt cgcggtcacc catccgctgc cgctgctgtg gcaggcgcct gcgccggtgc
     5461 aatggctgtc gctggccaac gcgaccgtct gcaccgtgtt gccggtgctg gcgatcatgc
     5521 tggcggtgca gcgcgtgggt tcgtcgctgg ccgcacaggt cggtatgctg ggccctgttt
     5581 ccaccatcgt gatgagccta tggctgctcg acgaaccgat ggggccggcg cagatcgccg
     5641 gcaccgtgct ggtgctgatc ggcgtactgc tggtgacccg cctgcggcgc tgacgccgga
     5701 gcaggcgcgc gcgcgcatcc tggcggtgat ccgcgccatc ccggcggggc aggtgatggg
     5761 ctatggccag gtggcgatgc gtgccggcct gcccgggcgc gcccggctga ccgcgcggat
     5821 cctcggccag aacgacgacc cggacctgcc ctggcatcgc gtgctgcgct cggatgggcg
     5881 catcgccatg gaagaaggct cagccggctg gcgcgagcag tcgcagcggc tgcgcgccga
     5941 aggcgtggtg gtggagaacg gccgggtgcg gatgccggcc accgatccgg ccgcggcgct
     6001 ggatgcggcg gtgtggggcc cgggctgagc gcggctggtg actgaacagg ccgtgcctgg
     6061 cggtcgccaa caaggccggg tgctgcggct atgatggagg ccgatccatg ccggtgctcc
     6121 catgttcccg cgactgccaa ccgtcaccaa ggccctgctg atcgccaacg cgatcctgtt
     6181 cctgctgcag cagccgttcc tgctcggcat gcagaccttc gagccgttca tgctgcaacc
     6241 gttgcagcag ggcttcgatg cgttctcgcc gggcggcaat ttccagccct ggcagctgct
     6301 gacctatggc ttcctgcatg gcagcttcgg ccatctgttc ttcaacatgc tggcagtttt
     6361 catgttcggt gcgccgctgg agcagacctg gggcgagaag cgcttcctgc tgtactacct
     6421 ggtctgcgtg gccggtgccg gtgtctgcca gctgctggtg gggacgctgc tggagaaccc
     6481 ggcgacggtg ctgggcgcct ccggcggcgt attcggcctg ctgctggcct acggcatgct
     6541 gttccccaac cagcgggtga tgttgctgtt cccgccgatc ccgatgaagg cacggacctt
     6601 cgtgatcctg ttcggcgtgg gtgaactggt gctgggcatg accggctggc agccgggcgt
     6661 ggcccacttc gcgcacctgg gcggcatgct gttcggctgg ttgttgatcc gctattggcg
     6721 cgggcagccg ccgttcaaca agcgccgccc gccgggccca ccgaatcgac cgaaccatct
     6781 gcgcagcgtg aagtgaggcg ctatgcgccc cacttcac
//
LOCUS       DAOKIP010000207         6797 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.208,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000207 DAOKIP010000000
VERSION     DAOKIP010000207.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 6797)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6797)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6797
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.208"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..979)
                     /gene="mreC"
                     /locus_tag="QEL58_003389"
     CDS             complement(<1..979)
                     /gene="mreC"
                     /locus_tag="QEL58_003389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005411076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreC"
                     /protein_id="HDS1677823.1"
                     /translation="MPPYAGPPVASRSGDAASPLRLLAYLALAITLIVLDDQAGWLAQ
                     LRGQANSLVQPVWALAGLPGKLGNQVKDSAASHGQLVNENRELRNQLLLANARLTRLQ
                     TAALDNAQLRELLNVAERSGLDVQLAPVLDIDLDPVKQRLVLDAGSREGVHVGQAVID
                     AGGLMGQVISVTGGTSTVLLLTDPDHAVPVTVARNGVRLIVYGRGDKLELRDIPLSAG
                     VEVGDEIVTSGLGGRFPAGFPVGTITALRPDDTHAFLVGELKPAAQLDRGRDVLLLRP
                     GAAIRIPPELRLQLEATAPGGPATGATAPAPATTTPAPASAPVVPAAGRQ"
     gene            complement(1101..2147)
                     /locus_tag="QEL58_003390"
     CDS             complement(1101..2147)
                     /locus_tag="QEL58_003390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000913396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein"
                     /protein_id="HDS1677824.1"
                     /translation="MFKKLRGMFSNDLSIDLGTANTLIYVRGQGIVLNEPSVVAVRQD
                     RAIGGTRSVAAVGAEAKQMLGRTPGHITTIRPMKDGVIADFTYTEAMLKHFIKKVHKS
                     RVLRPSPRVLVCVPAGSTQVERRAIKESAEEAGARDVFLIEEPMAAAIGAGMPVTEAR
                     GSMVIDIGGGTTEVAVISLNGIVYSASVRIGGDRFDESITNYVRRNHGMLIGEATAER
                     IKVELGCAYPQAEVIEMEISGRNLAEGVPKMIKISSNEVLEALHEPLSGIVSAVKLAL
                     EQTPPELCADVAERGIVLTGGGALLRDLDRLISEETGLHVQVADDPLTCVARGGGRAL
                     ELVDMHGNEFFAPE"
     gene            2431..3369
                     /locus_tag="QEL58_003391"
     CDS             2431..3369
                     /locus_tag="QEL58_003391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014038522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate kinase family protein"
                     /protein_id="HDS1677825.1"
                     /translation="MSALICGSLAFDTIMVFPDQFKNHILPDKVHILNVSFLVPRMRR
                     EFGGCAGNIAYNLHLLGGQPIPMGTVGSDFGPYREYFEGLGIDLTRVRVIDELFTPQA
                     FITTDHDNNQITAFHPGAMMRSYENHVRGVPGVTLGLVGPDGREGMIQNAQEFHEDGI
                     PFIFDPGQAMPLFNGPELRAFIDQADYVVVNDYESNLLQERTGWDEKEIVSRVKAYIT
                     TRGPKGAVIHTPEKSYDIPPAHERRVVDPTGCGDAFRAGLIYGIQKGYDWLTIGRMGN
                     LMGALKVEHPGTQNQRFTFDEFNEQFKQQFGYALSA"
     gene            complement(3548..4171)
                     /locus_tag="QEL58_003392"
     CDS             complement(3548..4171)
                     /locus_tag="QEL58_003392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008268059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HDS1677826.1"
                     /translation="MIATGSAVHALSAIRHWVFDMDGTLTVAVHDFAAIRRTLQIAAE
                     EDILDHIAALPEAPAQAKRAWLLDHERALAEDALPAPGAVKLLRALAAAGCRLGILTR
                     NDHALAKLTLEAIGVGELFDDADIIGRDEAVPKPSPDGLQQHLRRWGVSAGQAVMVGD
                     HAYDLECGRAAGTHTVLVNLPENPWPDCTDWHFADCRDLLAAWLQKG"
     gene            complement(4171..4902)
                     /locus_tag="QEL58_003393"
     CDS             complement(4171..4902)
                     /locus_tag="QEL58_003393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677827.1"
                     /translation="MKRLILLTACTLALAACSNPEEERKAQEAAAAAVQAQKEAKAED
                     VAKQYDMAVAAQDWERARLHGASLLDQYKDTAAAERIAAGFDEVKAKGDAARDLRRMQ
                     ALWQYNQIPVGNKGNQVSAQIYSKERVDVDGSGAKPVQLVFRDHPEWKRHAYLVLQAG
                     DFRCPQCTVKVTVDDGKPVSMAAWRPKTDEAIAMFITDQKALWKLARKGKSISIEFPV
                     KAGGTRTAVFETGGVDASRMPQWWQ"
     gene            complement(5026..>6797)
                     /locus_tag="QEL58_003394"
     CDS             complement(5026..>6797)
                     /locus_tag="QEL58_003394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014038524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="M1 family metallopeptidase"
                     /protein_id="HDS1677828.1"
                     /translation="PDKVVIKDIALDLKLDFDQKQIGGTATYTLEWKQKDAKQLVLDT
                     RELTVSKVESVAADGARSPLKFELAAADKVFGSKLTIEAPEQPAQVEVTYHTAPTASG
                     LQWLAPSMTEGKKLPFMFSQSQAIHARSWVPLQDTPSVRFTYSAHVVSRPDVMVLMSA
                     DNDPKAARDGDYTFKMPQPIPSYLLAIAAGDLVFEPISGRSGVWAEPTMVNKAAKEFE
                     DTEKMIGAAEKLYGEYRWGRYDMLVLPPSFPFGGMENPRLTFATPTVIVGDKSLVSLV
                     AHELAHSWSGNLVTNASWKDIWLNEGFTTYVQGRITEALYGKEMAEMEKQIDQTDLLA
                     EVKDMSPADQALALPPLNERDPDEALSQVAYVKGSWFLEFLEQRFGRETFDPFLRGWF
                     DDHAFQSANTDQFVEYLKKNLLPKNPSAVTEAELKAWLDEPGIPAFAVKAQSRNFSGV
                     DTARIAFASAGTVPSSQVIADWSTQEWVRFIDGLGATQPLDKLATLDKAFHFTGTPNG
                     EIAMRWYPLAIRSGYEQANEGAAAFIERVGRRKLIMPIYAELVKTPKGLELAKQAFEK
                     AKPGYHPITTASVQDMLAKAEAK"
BASE COUNT         1064 a         2306 c         2243 g         1184 t
ORIGIN      
        1 gttgccggcc agcggccggc actaccggag cactggccgg agccggcgtc gttgtggctg
       61 gcgcaggcgc ggtggcaccc gtggccgggc cgcccggcgc ggtggcttcc agctgcaggc
      121 gcagttccgg cggaatccgg atcgccgcgc ccgggcgcag cagcagcacg tcgcggccgc
      181 ggtcgagctg ggccgccggc ttcagttcgc cgaccaggaa ggcatgggta tcgtccggac
      241 gcagggcggt gatggtgccg accgggaagc cggccgggaa gcggccaccc agaccggaag
      301 tcacgatctc atcgcccact tccacaccag cgctgagcgg aatgtcgcgc agttccagtt
      361 tgtcgccacg gccgtagacg atcaggcgca cgccgttgcg ggccacggtg accggtaccg
      421 cgtggtcggg gtcggtcagc agcagcacgg tggaggtgcc gccagtgacg ctgatcacct
      481 ggcccatcag gccgccggca tcgatcaccg cctgcccgac atgcacgcct tcgcggctgc
      541 cggcgtcgag caccagccgc tgcttcaccg ggtccaggtc gatgtccagc accggtgcca
      601 gctgcacgtc caggccacta cgctcggcca cgttcagtag ttcgcgcagc tgggcgttgt
      661 ccagcgcggc ggtctgcagg cgggtcaggc gcgcgttggc cagcagcagt tggttgcgca
      721 gttcacgatt ctcgttgacc agctggccat ggctggccgc cgaatccttg acctggttgc
      781 cgagcttgcc cggcaggccc gccagcgccc acaccggctg caccaggctg ttggcctgcc
      841 cgcgcagctg cgcgagccag ccggcctggt cgtcaagcac gatcagggtg atggccagtg
      901 cgagataagc cagcagccgc aaggggctgg cggcatcacc ggatcgggaa gcgacgggag
      961 gtccggcgta gggcggcacg gcaacgattc aactggcaga aggcggaagg gaaacacgcg
     1021 ggcgccccgc cggtgccggc ccaccctcat ggcgggccgc accccggagg ggcgctgcgg
     1081 gcgcaggcag ccgggacggc ttactccggc gcaaagaact cgttgccgtg catgtcgacc
     1141 agctccagcg cacggccacc gccgcgggcc acgcaggtca gcggatcgtc ggccacctgc
     1201 acgtgcaggc cggtttcctc ggagatcagg cggtccaggt cgcgcagcag ggcgccacca
     1261 ccggtcagca cgatgccgcg ctcggcgacg tcggcgcaca gttccggcgg ggtctgctcc
     1321 agcgccagct tgaccgcgct gacgatgccc gacagcggct cgtgcagggc ctcgagcacc
     1381 tcgttggagc tgatcttgat catcttcggc acgccctcgg caaggttgcg gccggagatt
     1441 tccatctcga tcacttccgc ctgcgggtag gcgcagccca gctcgacctt gatgcgctca
     1501 gcggtggctt caccgatcag catgccgtgg ttgcggcgca cgtagttggt gatggactcg
     1561 tcgaagcggt cgccgccgat gcggaccgac gccgaataga cgatgccgtt gagcgagatc
     1621 accgccactt cggtggtgcc gccgccgatg tcgatgacca tcgagccacg ggcttcggtc
     1681 accggcatgc cggcgccgat cgccgcggcc atcggctctt cgatcaggaa cacgtcacgg
     1741 gcaccggctt cctcggccga ttccttgatg gcgcggcgct cgacctgggt cgagccggcc
     1801 ggcacgcaga ccagcacgcg cgggctcggg cgcagcacgc gcgacttgtg caccttcttg
     1861 atgaagtgct tgagcatcgc ctcggtgtag gtgaagtcgg caatgacgcc atccttcatc
     1921 gggcggatgg tggtgatgtg gcccggggta cggcccagca tctgcttggc ctcggcgcct
     1981 acggctgcca ccgaacgggt gccgccaatg gcacggtcct gacgcacggc cacgaccgac
     2041 ggctcgttca gcacgatccc ctgcccgcgc acgtagatga gggtgttggc cgtgcccagg
     2101 tcgatggaca ggtcgttgga gaacatgcca cggagtttct tgaacatctg aggaaggagt
     2161 cctgaggggt gtcgtgcccg ccgcgggatg gcgaaaaaat gggcagaaat cgaggccgac
     2221 aagcctagca acccgcctgc cgccgagcaa ggaaaaaact agctgaaccc gcgtcttcac
     2281 aggctttcgg cctgatccgg tctcacccgg ttctggccct gagcggcacc agcgggtaac
     2341 ctttgcgccg tcgggcgccc aagggcgccg tttgcttgcc cgctgaaccg ggccggccca
     2401 tcccaaaatt caccgcatag gcttacatcg atgtccgctc tgatctgtgg ttctcttgcc
     2461 ttcgacacca tcatggtgtt cccggaccag ttcaagaatc acatcctgcc ggacaaggtg
     2521 cacatcctga acgtgtcctt cctggtgccg cgcatgcgcc gcgagttcgg tggctgcgcc
     2581 ggcaacatcg cctacaacct gcacctgctg ggcggccagc cgatcccgat gggcaccgtg
     2641 ggttcggact tcggcccgta ccgcgaatac ttcgaaggcc tgggcatcga cctgacccgc
     2701 gtgcgcgtga tcgatgagct gttcaccccg caggcgttca tcaccaccga ccacgacaac
     2761 aaccagatca ccgccttcca cccgggcgcg atgatgcgtt cctacgagaa ccatgtgcgt
     2821 ggcgtgccgg gcgtgaccct gggcctggtc ggcccggacg gccgcgaggg catgatccag
     2881 aacgcgcagg aattccacga agacggcatc ccgttcatct tcgacccggg ccaggccatg
     2941 ccgctgttca acggcccgga gctgcgtgcc ttcatcgacc aggccgacta cgtggtggtc
     3001 aacgactacg agtcgaacct gctgcaggaa cgcaccggct gggacgaaaa ggagatcgtc
     3061 agccgggtca aggcctacat caccacgcgc ggcccgaagg gcgcggtcat ccacaccccg
     3121 gaaaagagct acgacatccc gccggcgcac gagcgccgcg tggtcgaccc gaccggctgt
     3181 ggcgacgcct tccgtgccgg cctgatctac ggcatccaga agggctacga ctggctgacc
     3241 atcggccgca tgggcaacct gatgggcgcg ctgaaggtcg aacaccccgg cacccagaac
     3301 cagcgcttca ccttcgatga gttcaacgag cagttcaagc agcaatttgg ctacgcgctt
     3361 agcgcgtaac caaattgccc gcgcattcca ccttatcccc gcgccttcgg cgcgccccct
     3421 tgaacaacaa gggggctttc cacccgatgc gctaccggga atgctgttgg taggtgtcga
     3481 ccttggtcga cacgctttac cctggtaggt gtcgacccgg gtcgacactg ccggccagcg
     3541 gccggcacta ccccttctgc agccatgcgg ccaacaggtc gcggcaatcg gcgaaatgcc
     3601 aatcggtgca gtccggccat gggttctccg gcaggttgac cagcacggtg tgggtgcccg
     3661 cagcgcggcc gcactccagg tcgtaggcgt ggtcaccgac catcaccgcc tgcccggcgg
     3721 aaacgcccca gcgccgcagg tgctgctgca ggccatccgg tgaaggcttg ggcacggctt
     3781 catcgcggcc gatgatgtcg gcatcgtcga acagttcgcc gaccccgatc gcctccagcg
     3841 tcagcttcgc cagcgcgtgg tcgttgcggg tcaggatgcc cagccggcag cctgcggccg
     3901 ccagcgcgcg cagcagcttc accgcgcccg gcgccggcag cgcgtcctcg gccagcgcgc
     3961 gctcgtgatc cagcagccac gcacgcttgg cctgcgccgg tgcctccggc agcgccgcga
     4021 tatggtcgag gatgtcttcc tcggcggcga tctgcagcgt gcggcggatc gccgcgaagt
     4081 catgcacggc taccgtcagc gtgccgtcca tgtcgaacac ccagtgccgg atcgcggaca
     4141 acgcgtgcac tgcgctgccc gttgcgatca tcactgccac cactgcggca tgcggctggc
     4201 gtcgacaccg ccggtttcga acacggccgt gcgcgtgccg ccggccttga ccgggaactc
     4261 gatgctgatc gacttgccct tgcgcgccag cttccacagc gccttctggt cggtgatgaa
     4321 catcgcaatg gcttcatcgg tctttggccg ccaggcggcc atcgacaccg gcttgccgtc
     4381 gtccacggtc accttcaccg tgcactgcgg gcagcggaaa tcgccggcct gcagcaccag
     4441 gtaggcgtgc cgcttccact ccgggtgatc gcggaacacc agctgcaccg gcttggcacc
     4501 gctgccatcc acgtccaccc gttccttgct gtagatctgc gccgagacct ggttgccctt
     4561 gttgcccacc ggaatctggt tgtactgcca cagtgcctgc atgcggcgca ggtcgcgcgc
     4621 ggcatcgccc ttggccttga cctcatcgaa gccggcggcg atccgctcgg ccgcggcggt
     4681 gtccttgtac tggtccagca gcgaagcgcc atgcaggcgt gcgcgttccc agtcctgcgc
     4741 ggccacggcc atgtcgtact gcttggcgac gtcctcggcc ttggcttcct tctgcgcctg
     4801 cacagcggcc gcagcggctt cctgcgcctt gcgctcttcc tcggggttgc tgcaggcggc
     4861 cagggccagg gtgcaggcgg tgagcaggat cagtcgtttc atgcggaggt ccttggtgtt
     4921 ttcgcattct tgtagagtcg agccatgctc gactgctgtt gaagagccag tcgagcatgg
     4981 ctcgactcta caaaaaagcg ccggggggtg cccggcgctt tctgcttact tggcttcggc
     5041 cttggccaac atgtcctgca ccgaggcggt ggtgatcggg tggtagcccg gcttggcctt
     5101 ctcgaaggcc tgcttggcca gctccagccc cttcggcgtc ttcaccagtt cagcgtagat
     5161 cggcatgatc agcttgcgac ggccgacgcg ctcgatgaat gcagcggccc cttcgttggc
     5221 ctgctcgtaa ccgctgcgga tcgccagcgg ataccagcgc atggcgatct cgccattcgg
     5281 ggtaccggtg aagtggaacg ccttgtccag cgtggccagc ttgtccagcg gctgggtggc
     5341 gcccaggccg tcgatgaagc gcacccattc ctgcgtgctc cagtcggcga tgacctggct
     5401 gctcggcacg gtgccggcgc tggcgaaggc gatgcgcgcg gtatcgacgc cgctgaagtt
     5461 gcgcgactgc gccttgaccg cgaacgccgg gatgcccggc tcgtccagcc aggccttcag
     5521 ttcagcctcg gtcactgccg acggattctt cggcagcagg ttcttcttca ggtactcgac
     5581 gaactggtcg gtgttcgcgc tctggaaggc gtggtcatcg aaccagccac gcaggaacgg
     5641 atcgaacgtc tcacggccga agcgctgttc caggaactcc aggaaccacg aacccttgac
     5701 gtaggcgacc tggctgaggg cttcgtcggg gtcacgctcg ttcagcggcg gcagcgccag
     5761 cgcctggtcg gccgggctca tgtccttcac ttcggccagc aggtcggtct ggtcgatctg
     5821 cttctccatc tcggccatct ccttgccgta cagggcttcg gtgatgcggc cctggacgta
     5881 ggtggtgaag ccctcattga gccagatgtc cttccagctg gcgttggtca ccaggttgcc
     5941 cgaccagctg tgcgccagtt cgtgggcgac cagcgacacc agcgacttgt cgccgacgat
     6001 cacggtcggg gtggcgaagg tcaggcgcgg gttctccatg ccgccgaacg ggaacgacgg
     6061 cggcagcacc agcatgtcgt agcggcccca gcggtattcg ccgtacagct tctcggcggc
     6121 accgatcatc ttctcggtgt cttcgaattc cttggcggcc ttgttgacca tggtcggctc
     6181 ggcccagacg ccggagcggc cggagatcgg ctcgaacacc aggtcgccgg cggcgatggc
     6241 caacaggtac gacggaatcg gctgcggcat cttgaaggtg tagtcaccgt cacgcgcggc
     6301 cttcggatcg ttgtcggcgc tcatcagcac catcacgtcc gggcgcgaga ccacgtgcgc
     6361 gctgtaggtg aagcgcacgc tcggggtgtc ctgcaacggc acccaggaac gggcgtggat
     6421 ggcctgcgac tggctgaaca tgaagggcag cttcttgccc tcggtcatcg acggcgccag
     6481 ccactgcagg cccgaggcgg tcggtgcggt gtggtaggtc acttccacct gggccggctg
     6541 ctccggggct tcgatggtca gcttgctgcc gaacaccttg tcagcggcgg ccagctcgaa
     6601 cttcagcggg ctgcgcgcgc catcggcggc gacggactcg accttggaca cggtcagctc
     6661 gcgggtgtcg agcaccagct gcttggcgtc cttctgcttc cattccaggg tgtaggtggc
     6721 ggtgccgccg atctgcttct ggtcgaagtc cagcttcaga tccagcgcga tgtccttgat
     6781 gacgaccttg tccggct
//
LOCUS       DAOKIP010000208         6775 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.209,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000208 DAOKIP010000000
VERSION     DAOKIP010000208.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 6775)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6775)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6775
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.209"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            251..1522
                     /gene="egtB"
                     /locus_tag="QEL58_003395"
     CDS             251..1522
                     /gene="egtB"
                     /locus_tag="QEL58_003395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008267233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ergothioneine biosynthesis protein EgtB"
                     /protein_id="HDS1677829.1"
                     /translation="MDSVPAAVAAPQHDLAHQFARVRARSLQLAAPLSAEDAMLQSMA
                     DASPSKWHLAHTTWFFERFVLAGLAAAPAHDPGWDYLFNSYYKSIGPAHARPQRGLLS
                     RPSLQQVRDYRQQVDAQVQSRLAAGDLDPQALQHLQLGLQHEQQHQELLLTDIKHAFW
                     CNPLQPAYRQDLHAITSIATAQGWIESPERIVTVGAAAWPQHAAFAYDNESPPHRVLL
                     PAHALAERPLSNAEYLAFIEAGGYREPRWWLSEGWALREAEDWQHPLYWDDALQREYT
                     LGGWRQLDLHAPVCHLSYYEADACARWAGARLPSEFEWEAAAASQPLRGHFADDDGLH
                     PQAGQGNGLRQMFGDVWEWTQSAYGAYPGFRPFAGNLGEYNGKFMCGQWVLRGGSCAT
                     PRGHVRASYRNFFMPPARWQFSGLRLARDLT"
     gene            1519..2544
                     /gene="egtD"
                     /locus_tag="QEL58_003396"
     CDS             1519..2544
                     /gene="egtD"
                     /locus_tag="QEL58_003396"
                     /EC_number="2.1.1.44"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017355105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-histidine N(alpha)-methyltransferase"
                     /protein_id="HDS1677830.1"
                     /translation="MSTVDDALQALTDLTPGRQQILADVVAGLSRPSRQLPSKYFYDA
                     RGSRLFEQITQTPEYYPTRTELALLKRVLPDIARTVGPRLHVVELGSGSGRKTALLLA
                     ALHDPVAYTPIEISRAALLSSIDHLAPALPEVEMLPVCADFTRPVAVPMPEREPARRL
                     LFFPGSTLGNFEGEDAIALLRAMRQTMGGEGLALVGIDLHKDPALIEAAYNDAQGVTA
                     AFTLNLLARLNREIGSDFDLDGFRHRACYSTARLRIETDLVSRWAQDVHLDGRTFHFA
                     ADEPIRVEYSHKYTDDSFEALLQQAGLQVTQRWDADRPAYGLRLLRAVQPAGGPGALQ
                     VRRHRYP"
     gene            2577..3839
                     /locus_tag="QEL58_003397"
     CDS             2577..3839
                     /locus_tag="QEL58_003397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004141406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic murein transglycosylase"
                     /protein_id="HDS1677831.1"
                     /translation="MPILTTLGLAAALVSAPTPAAADASADPAFSRCLANLQATAASQ
                     GIRAERFTEITAGLTPDPSVLGLLDAQPEFTTPIWDYLAALVDRQRVDDGRAMLQQHR
                     DLLDRVSAQYGVDPATIVAVWGVESDYGRVFGKRPLLQSLATLSCAGRRQAFFRGELL
                     ALLTLIDRGDLQAQGLTGSWAGAFGHTQFMPSTYARIAVDGDGDGRRDLVGSIPDALA
                     STANYLKRAGWRSGEPWGMEVRVAAGFNASQAGRTQRRALAEWRAQGVTALDGSALAP
                     AKLPADARAALLLPAGSKGPALLVFRNYDAIYSYNAAESYALAIATLADQLRGGAGLA
                     TAWPTDDPGIGRDERRQLQTLLLARGHDIGSADGMIGTATRRAIQAEQQRLGWANADG
                     RAGQRILRALQEEAAAAPSAQKALPAAR"
     gene            3880..4764
                     /locus_tag="QEL58_003398"
     CDS             3880..4764
                     /locus_tag="QEL58_003398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007972258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-hexose-6-phosphate mutarotase"
                     /protein_id="HDS1677832.1"
                     /translation="MQSNPDISNGLYHGLEAWHVRTPVATAVISVFGGQLLSFIPQGQ
                     PDLLWLSPMRAELPTPIRGGVPVCWPWFGRQGQGADAPAHGLVRTARWELLHVHQGDD
                     GAVELQLAPSLPDPLGLRLQMVVRVGHQLHQQLITENIGTAPVTFTQALHSYFRVGDA
                     SRVDVEGVDGLQYLDKYEDYSHARQQQGPWSLRDPRDPGRSDRIYTGAQGHYVLRDPV
                     LQRQIEIHSEGSQTLVAWNPGAEAAAKMSDVGEGWRDYVCLEVANAGPEQITLEPGAS
                     HRMAQTLASAPLQATTGR"
     gene            4797..5555
                     /locus_tag="QEL58_003399"
     CDS             4797..5555
                     /locus_tag="QEL58_003399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010487527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4339 domain-containing protein"
                     /protein_id="HDS1677833.1"
                     /translation="MQDAQWWYANSRQSEGPVDLAGLRRLQQDGTVTARTLLWREGMP
                     SWRPLAELDPAVAAAGPVAQPPEPAGVATTAADPSDPYRAPTTAALPTPATGLEGDMA
                     LYAAVVGGNFPIYRQRWRLDQGIATGSGTWHWPAFLLGLVWMMYRRMYRLAAMWAGLL
                     LLISVIETLLDVPDGLSLVITVALSITTGAFGNTWYLAHCQRLIARARAESRGDETRL
                     HRELSARGGTSVVATVIALVIAAVLSTVGAGLAG"
     gene            complement(5562..6749)
                     /locus_tag="QEL58_003400"
     CDS             complement(5562..6749)
                     /locus_tag="QEL58_003400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010487529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="benzoate/H(+) symporter BenE family transporter"
                     /protein_id="HDS1677834.1"
                     /translation="MSMQVARTWWRDLSIPAIVAGFITVLVGFASSAVIVFQAAQAVG
                     ADQAQIASWMWALGLGMGVTCIGLSLRYRVPVVTAWSTPGAAMLVVGAGGASLSEATG
                     AFLLAAVLGMLAGFSGLFARLMQRVPMALAAGMLAGVLLRFGLDVFVAMNTQLVLALA
                     MFATWLAGRRLFPRYAVIATLLVGIAIAASRGLLHAQQVHLQLAVPQWVTPSLSWTAV
                     AGIALPLFMVTMASQNIPGVAVMRASGYDAPVSPLIGWIGVVNTLLAPFGAYALNLAA
                     ITAAICMGRDAHEDPARRYIAAMAAGAFYIVIGLFGATVAALFAAFPRELVACVAGIA
                     LFGTIGNSLASALAVERDREAALVTFLVTASGVSLAGIGSAFWGLVAGALCLLVLRPR
                     QGR"
BASE COUNT         1113 a         2398 c         2266 g          998 t
ORIGIN      
        1 cgtcttcgtt gcccagcgcc gtccacagca gcagtgcgac cagcacggcg ggcagcacga
       61 acaggtaatg cgcaggctgg cggagcggat gcaggggcaa gcaggaattc cagcgcggtg
      121 acgacgcggc cgcagcactg ccgttagcgg cgttcgggcc cgcttcttga atgcgggcgg
      181 gtcacccatg tgaacaaagt gacgccgaac catgacgtcg cactcaccgg cctgcgccga
      241 tgctgcctgc atggacagcg tacctgccgc cgtcgctgcc ccgcagcacg atctcgccca
      301 ccagtttgcg cgggtgcggg cccgcagcct gcagttggcc gcgccgctca gcgccgagga
      361 cgccatgctg cagagcatgg ccgatgccag cccgagcaaa tggcacctgg cccacaccac
      421 ctggttcttc gagcgcttcg tgctggccgg ccttgccgcc gcaccggcgc acgatcctgg
      481 ctgggactac ctgttcaaca gctactacaa gagcatcggc ccggcccacg cgcggccaca
      541 gcgtgggctg ctgtcgcgcc cttcgctgca gcaggtacgc gattaccgcc agcaggtgga
      601 tgcgcaggtg cagtcacgcc ttgctgccgg cgacctcgac ccacaggcgc tgcagcacct
      661 gcagctgggc ctgcagcacg aacagcagca ccaggagctg ctgctcaccg acatcaagca
      721 tgcgttctgg tgcaatccgc tgcagccggc ctaccggcag gacctgcacg ccatcaccag
      781 catcgccact gcgcagggct ggatcgaatc gcccgaacgc atcgttaccg tcggtgccgc
      841 ggcgtggccg cagcacgccg ccttcgccta cgacaacgaa tcgccgccgc accgcgtgct
      901 gctgcccgcc catgccctgg ccgagcgccc gctcagcaac gccgagtacc tggccttcat
      961 cgaggccggc ggctatcgcg agccgcgctg gtggctcagc gaaggctggg cgctgcgcga
     1021 agcagaggac tggcagcacc cgctgtactg ggacgacgcc ctgcagcgcg aatacaccct
     1081 gggcggttgg cgccaactgg acctgcacgc gccggtctgc cacctcagtt attacgaggc
     1141 cgacgcctgc gcccgctggg ccggtgcacg cctgcccagc gagttcgaat gggaagccgc
     1201 tgccgcctcg caaccgttac gcggccattt cgccgatgac gatggcctgc acccgcaggc
     1261 cgggcagggc aatggcctgc gacagatgtt cggcgatgta tgggagtgga cccagagcgc
     1321 ctatggggcc tatccgggct tccgcccgtt cgccggcaac ctgggcgaat acaacggcaa
     1381 gttcatgtgc gggcagtggg tgctgcgcgg cggcagctgc gccactccgc gcggacatgt
     1441 gcgtgccagc taccgcaatt tcttcatgcc gccggcgcgc tggcagttct ccgggctgcg
     1501 cctggccagg gacctcacat gagtacggtg gatgacgcac tgcaggcgct gaccgatctc
     1561 accccggggc gccagcagat cctggccgat gtggtggccg gtctgtcgcg cccgtcgcgg
     1621 cagttgccct ccaagtactt ctacgatgcc cgcggctcgc gcctgttcga gcagatcacc
     1681 cagacccccg agtattaccc cacccgcacc gagctggccc tgctgaagcg cgtgctgccg
     1741 gacatcgccc gtaccgtcgg cccgcgcctg cacgtggtgg aactcggcag cggcagtggc
     1801 cgcaagaccg cgctgctgct ggccgcattg cacgatccgg tggcctacac gccgatcgag
     1861 atctcgcgtg ccgcactgct gtccagcatc gatcacctgg caccggcgct gcccgaggtc
     1921 gagatgctgc cggtctgcgc cgacttcacc cgtcccgtgg ccgtgcccat gcccgagcgc
     1981 gagccggcgc gacgcctgct gttcttcccc ggttccacgc tgggcaactt cgaaggcgag
     2041 gacgccatcg cgctgttgcg cgcgatgcgc cagaccatgg gcggtgaggg cctggccctg
     2101 gtcggcatcg acctgcacaa ggacccggcg ctgatcgagg cagcctacaa cgacgcgcag
     2161 ggcgtcaccg ctgccttcac cctcaacctg ctggcccggc tcaaccgcga gatcggcagt
     2221 gacttcgatc tcgacggatt ccgtcatcgt gcgtgctaca gcaccgcccg gctgcgtatt
     2281 gaaaccgacc tggtcagccg ctgggcgcag gatgtccatc tcgatggccg gaccttccac
     2341 ttcgccgccg atgagccgat ccgcgtggaa tacagtcaca agtacaccga tgacagcttt
     2401 gaagcgctgc tgcagcaggc tgggctgcag gtcacgcagc gctgggatgc cgaccgtcct
     2461 gcctacggcc tgcgcctgct gcgtgcggtc cagcccgccg gtggtccggg tgcccttcag
     2521 gttcggcggc atcggtaccc ctaagatggc cctgcaacgg caacacggag gacgccatgc
     2581 ccattctcac cacgctcggc ctggcagccg ccctggtttc ggcccccacg cctgcggcag
     2641 cggatgccag tgccgatcca gccttcagcc gctgcctggc gaacctgcag gccaccgccg
     2701 ccagccaggg catccgtgcc gagcgcttca ctgagatcac cgccggcctc acgcccgacc
     2761 cgagcgtgct cggcctgctc gatgcgcagc ccgaattcac cacgccgatc tgggactacc
     2821 tggccgcgct ggtcgatcgc cagcgcgtgg atgatggccg cgcgatgctg cagcagcatc
     2881 gtgacctgct cgatcgggtg tctgcacagt acggcgtcga tccggccacc atcgtcgcgg
     2941 tctggggcgt ggagagcgac tacggccgcg tgttcggcaa gcgcccgctg ctgcagtcgc
     3001 tggccacgct gtcctgcgcc ggccgccgcc aggccttctt ccgcggtgaa ctgctggccc
     3061 tgctcacgct gatcgaccgt ggagacctgc aggcacaggg cctcaccggg tcctgggcag
     3121 gcgccttcgg gcatacgcag ttcatgccca gcacctacgc acgcatcgcc gtggatggtg
     3181 atggcgatgg tcgccgcgac ctggtcggca gcatccccga tgcgctggcg tccaccgcca
     3241 actacctcaa gcgcgccggt tggcgcagtg gcgagccgtg gggcatggag gtgcgtgtcg
     3301 ccgccggttt caatgccagc caggcggggc gtacccagcg ccgcgccctg gccgagtggc
     3361 gcgcgcaggg agtgactgcg ctggatggca gtgcgctggc cccggccaag cttcccgccg
     3421 acgcgcgtgc cgccctgctg ctgccggccg gcagcaaggg cccggcgttg ctggtgttcc
     3481 gcaattacga cgcgatctac agttacaacg cggccgagag ttacgcactg gcgatcgcca
     3541 cgctggccga ccagctgcgc ggcggcgccg gattggccac ggcctggccc accgacgatc
     3601 ccggaatcgg ccgcgatgag cgccgtcagc tgcagaccct gctgctggcc cgcggccacg
     3661 atatcggtag cgcagacggc atgatcggta ctgccacgcg tcgcgcgatc caggccgaac
     3721 agcaacgcct tggctgggcc aatgccgatg gtcgcgccgg gcaacgcatc ctgcgcgcgc
     3781 tgcaggaaga ggcggctgcc gcgcccagtg cgcagaaggc cttgccggcg gcacgttgac
     3841 cgcgacatca tcgccgcggt cttcaaggag cgtcatcgca tgcagtcgaa tccggacatc
     3901 agcaacggcc tgtatcacgg gcttgaggcc tggcacgtgc gcacgcccgt cgccacggcg
     3961 gtcatcagcg tgttcggcgg acagctgctg tcgttcattc cgcagggaca accggatctg
     4021 ttgtggttgt cgcccatgcg cgccgagctg ccgacgccga tccgcggtgg cgtgccggtg
     4081 tgctggccat ggttcggtcg ccagggccag ggcgcggatg ctcctgcaca tggcctggtg
     4141 cgcaccgcac gctgggaact gctgcacgtg caccagggcg atgacggcgc agtggagctg
     4201 cagctggccc cgtcactgcc cgacccactc ggcctgcgcc tgcagatggt ggtgcgcgtc
     4261 ggccatcagc tgcaccagca actgatcacc gagaacatcg gaaccgcccc ggtgacgttc
     4321 acccaggcac tgcacagcta cttcagggtg ggtgatgcca gccgcgtgga cgtcgagggt
     4381 gtcgacggac tgcagtacct ggacaagtac gaggactatt cccacgcgcg gcagcagcag
     4441 gggccatggt cgctgcgcga cccgcgcgat cctggccgca gcgaccgcat ctacaccggg
     4501 gcacagggcc actatgtgct gcgtgatccc gtgctgcagc ggcagatcga gatccacagc
     4561 gaaggcagcc agaccctggt ggcctggaac ccgggagccg aggccgcggc gaaaatgtcg
     4621 gatgtcggcg agggctggcg cgactacgtg tgtctggaag tggccaatgc cggtcccgag
     4681 cagattaccc ttgaaccggg cgcaagccac cggatggcac agaccctggc cagcgcaccg
     4741 ctgcaggcca cgacaggacg ttgagcgtga tgatggaacc agcagaggta ggcaacatgc
     4801 aggatgcgca gtggtggtat gccaacagca ggcagagcga agggccggtc gatcttgccg
     4861 ggctgcgccg cctgcaacag gacgggacgg tgacggcgcg tacgctgttg tggcgggagg
     4921 gaatgccgtc gtggcgaccg ctggccgagc tcgaccctgc ggtggccgca gccgggccgg
     4981 tcgcccaacc gcccgagcct gcaggagtcg cgacgaccgc cgccgatcca tccgatccct
     5041 accgcgcgcc cacgacggcc gccctgccca cgccagccac cgggctggag ggtgacatgg
     5101 cgctgtatgc cgccgtcgtc ggcggcaact tcccgatcta tcgccagcgc tggcggctgg
     5161 atcagggcat cgccacgggc agcggtacct ggcactggcc ggcgttcctg ctgggcctgg
     5221 tttggatgat gtaccgcagg atgtatcgcc tcgcagcgat gtgggcgggc ctgctactgc
     5281 tgatcagcgt gatcgagacg ctgctggatg tgcctgatgg cctgtcgctg gtcatcactg
     5341 tcgcgctcag catcactacc ggtgcctttg gcaacacctg gtacctggca cattgccagc
     5401 gcctcattgc ccgggcccga gcggagagcc gtggcgacga gacgcggctg caccgtgagt
     5461 tgagcgcgcg cggtggcacc agcgtggtcg ccaccgtgat cgccctcgtc atcgcggcgg
     5521 tgctgagtac cgtcggtgcc ggattggccg ggtagcccgg gtcagcggcc ctggcggggc
     5581 cgcagcacca gcaggcacag cgcaccggcc accagccccc agaacgccga accaatcccg
     5641 gccagggata cgcccgaggc ggtgaccagg aaggtgacca gtgccgcctc gcggtcacgc
     5701 tccaccgcca gtgcactggc caggctgttg ccgatggtgc cgaacagcgc gataccggcc
     5761 acgcaggcca ccagttccct ggggaacgcc gcaaacagtg ccgccaccgt ggcgccgaac
     5821 aggccgatga caatatagaa ggcgccagcc gccatggcag cgatgtagcg tcgtgccgga
     5881 tcctcgtgcg catcgcggcc catgcagatc gctgccgtga tcgccgccag gttcagcgcg
     5941 tacgcaccga acggcgccag cagggtgttg accacgccga tccagccgat cagcggcgat
     6001 accggggcgt cgtagccgga cgcgcgcatc accgccacgc cgggaatgtt ctgcgaggcc
     6061 atggtgacca tgaacaaggg cagggcgatg ccggccacgg cggtccacga caaggacggg
     6121 gtcacccact gcggtaccgc cagttgcagg tgcacctgct gtgcgtgcag caggccacgg
     6181 ctggcggcga tcgcgatacc gaccagcagg gtggcgatga cggcgtagcg cgggaacagg
     6241 cggcgcccgg ccagccaggt ggcgaacatc gccagtgcca gcaccagctg ggtgttcatg
     6301 gccacgaaca catccaggcc gaagcgcagc agcacgccgg ccagcatgcc cgcggccagc
     6361 gccatcggca cccgctgcat caaccgggcg aacaggcccg agaagcccgc cagcatgccc
     6421 agcacggcgg cgagcaggaa ggcgccggtc gcttcagaga gcgaagcgcc gccggcaccc
     6481 accaccagca tggccgcacc cggggtcgac catgcggtca ctaccggcac gcgatagcgc
     6541 agcgacaggc caatgcaggt cacgcccatg cccagaccaa gcgcccacat ccacgaggcg
     6601 atctgcgcct ggtcggcacc gacggcctgc gcggcctgga acacgatcac ggcggaactg
     6661 gcgaagccga ccagcactgt aatgaagcca gcgacgatgg ccggtatcga aagatcgcgc
     6721 caccacgtgc gtgccacctg catgctcatt gctctctctc cactgtgcat ccctg
//
LOCUS       DAOKIP010000209         6668 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.210,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000209 DAOKIP010000000
VERSION     DAOKIP010000209.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 6668)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6668)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6668
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.210"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            383..994
                     /gene="folE"
                     /locus_tag="QEL58_003401"
     CDS             383..994
                     /gene="folE"
                     /locus_tag="QEL58_003401"
                     /EC_number="3.5.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017158364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase I FolE"
                     /protein_id="HDS1677835.1"
                     /translation="MSKNNEKAAPQGDVTQDQAEDAVRTLLRWAGEDPSREGLLDTPR
                     RVAEAYGDWFSGYRDDPRAYMERTFEEVAGYDELIVLRDIEYESHCEHHMAPIIGRVH
                     VGYLPAGKVVGISKLARVVEAYARRFQVQEKMTAQIAQCIQDVLQPIGVGVVVEGAHE
                     CMTTRGIHKRGVSMVTSKMLGSFRDDARTRAEFLRFIEVGGKR"
     gene            1107..2576
                     /locus_tag="QEL58_003402"
     CDS             1107..2576
                     /locus_tag="QEL58_003402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004141298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3375 domain-containing protein"
                     /protein_id="HDS1677836.1"
                     /translation="MKHRERISRYRHLREQPQWKLLAADHAPEIIGLLQGLLMDGERT
                     LSSSVLNERLQRALDQLNGDELSRDLPRTAQAYIAHWLAQGWLERRLPEGADQEQYEL
                     STAALQAIRFADGLEQARVAATESRLALVIEQLSQLAAQTESDPDARLSALRDERDRI
                     DAEIARVGAGRVIALDGKRALERARQIIGLADELTEDFRRVRDDFEQLNRDFRERIID
                     DEGERGDVLSQLFEGVDVIGESDAGRSFQAFWRLLNDAEQSAQLDAALEAVLARGFAR
                     RLDRNERNFLRGFTSTMLERGGQVHDVLQNFARSLRGFVQSRGYLEQRRLNQLLKQAQ
                     SEALALRDEFPAQRGIGRDLQLTTSRLRSWSQWKLHDPRSAQVDGNVEYNDAAAISLE
                     SVGDLVASSEIDFRTLRRDLHDLLDAQPRLSIAQALSQREAPQGLGSVIGYLSLGTRF
                     GNVVAGEQELAQWRGGDGQVRRARIPLVWFTQERRHELA"
     gene            2563..3264
                     /locus_tag="QEL58_003403"
     CDS             2563..3264
                     /locus_tag="QEL58_003403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005421303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4194 domain-containing protein"
                     /protein_id="HDS1677837.1"
                     /translation="MSWHEDPIDAPQADVAEDAYEAEPVATVAQPRRGNDVYYLGDTG
                     RLPLDARRALCQLLIGPSIDQLRHAKLWPALIRSEAAIRSALADLFLELVLDRDSGVA
                     FTRQADTEDVDAPVLLRTSPLTFIDSVLLLYLRQQLAEADARGNRAVVADAEMAEALA
                     IYEKNLSTDRAGFNRRVASAVQKMKDNHILTRLSGQEDRHEVSPALKLLFSAEDVSQL
                     SAVYRQLRETPAAEA"
     gene            3281..6661
                     /locus_tag="QEL58_003404"
     CDS             3281..6661
                     /locus_tag="QEL58_003404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019658764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HDS1677838.1"
                     /translation="MAISKHTPALFNEGLPDPRLQQFRMRRLQVHNWGTFNGLTEVPI
                     AERGFLFVGRSGSGKSTLLDAMSALLTPPAIVDFNAAAREAERSGRDRNLVSYVRGAW
                     ADQQDSGTGEIATQYLRKGATWTALVLEYRAGDGRVVSLVRLLWISGNGTSAGDVRKH
                     YMIAERPFDIAKDLGGFDLDLRKLKQKLSDLHHFDTFSGYAERFRDLLGIDNEMALRL
                     LHKTQSAKNLGDLNVFLRDFMLDTPKTFDAAERLVSDFAELDGAHQAVVTARRQVETL
                     LPARAYYNDLKVMHRQRGDDEALKLGVDSFRESRRQALIEARLREMDVRDRGLLGEEA
                     QRRAALDNHTERLAELELQRRQQGGERIEELEREQGRAEAERDRRQAKRDQAQEAAQQ
                     LQAELPGDAHGFAELVERAQNELQDRQRASAALDDAISDRLGGKRDDERRFGEVRSEL
                     EAMQRTPSNIPAPMQKLRARLAEETGIAEAALPFVGELIQVRSEEQGWQGAIERVLGG
                     FALSLLVDDKHYNDVAEWVNRTHLGMRFTYYRVRRNDDAFAREPSAKSLLHKLELREH
                     VFESWLRRELGKRFDYECVDAKQLRNVDRGITREGQVKHPGDRFEKDDRSAVGDRRRW
                     ILGFNNHDKVGAFEREAQELAKRIASCETDIARLRGQRDRDNERRLACHELVSISWNE
                     IDIAAPQQRLSDIEATLRDLREGNADLAKLAKQIDAVRADIEQSRRTYEDVRVERGQL
                     VKERDRLDRARQQSRALVLPSLAQEQEAGLAERLQEQGPLSLETLEAHMRQVSNALNE
                     QLSSSQQDLNRIENQLIGCFRRFIQQWPEESGDFTVSVASAEDFLARLERLERDGLPQ
                     HEERFFDLLQNQSKNNLLALQRHSAEARKSIGQRLDEVNASLEQVPFNRGTLLTIELS
                     DRRLPEVGEFHLQLREVLSQQQTEQRELAESQFTVLRQLVNRLGSQEGEDKRWRELVL
                     DVRMHVEFIGVELDAETRQQVEIYRSGAGKSGGQRQKLATTCLAAALRYQLGGADSQL
                     PSYAAVVLDEAFDKADNEFTALAMNIFDNFGFQMVVATPLKSVMTLEPFIGGACFVEI
                     SGRHDSGVLLIEYDEEGKRLKLPERSRQQANEPEEAEA"
BASE COUNT         1199 a         2319 c         2207 g          943 t
ORIGIN      
        1 ggtgggttgg ctctttaaag gcaggagcag aagccaaagc tgtgcggacc agcggtccgc
       61 gcccaccaca gcagtcgcgc agtcgcgcgc ggtgcttccg aagccatgaa cccccgcttt
      121 tgaccccgct ttcgggcggt ccggccgcgc ccgcaggaaa ctgtcaggga tggggaaggg
      181 cggcagggca ggaccgtgag gcgcatggat gcgccgaccg agcccccatg gatgggttca
      241 cggcgtgtcc tgccctgccg cccttcccca tccaaacccg taacaggcag gcgccaccag
      301 acacccgatg aaccgtccca acaggacgac ccaccccccg gtcgggtacg atgctcgccc
      361 cccgttcggg acgctgtacg caatgagcaa gaacaacgaa aaggccgccc cgcagggcga
      421 cgtgacccag gaccaggccg aggatgccgt gcgcaccctg ctgcgctggg ccggtgagga
      481 cccgtcccgt gaaggcctgc tggatacccc ccgccgcgtc gccgaagcct atggcgactg
      541 gttcagcggt taccgcgacg acccgcgcgc ctacatggag cggaccttcg aggaagtggc
      601 cggctatgac gaactgatcg tcctgcgtga catcgagtac gaaagccact gcgaacacca
      661 catggcgccg atcatcggcc gcgtgcacgt cggctacctg ccggccggca aggtggtggg
      721 catcagcaag ctggcccgcg tcgtcgaagc ctacgcccgc cgattccagg tgcaggagaa
      781 gatgaccgcg cagatcgcgc agtgcatcca ggatgtgctg cagccgatcg gtgtcggcgt
      841 ggtcgtcgaa ggcgcccacg agtgcatgac cacccgcggc atccacaagc gcggtgtcag
      901 catggtcacc tccaagatgc tgggcagctt ccgcgacgac gcgcgtaccc gcgccgagtt
      961 cctgcgcttc atcgaagtgg gcggcaagcg ctgagccgct tgcccgcacc ccgccggccg
     1021 ctgcgagccg gcatgcccac ggctgcccgc gcggcagccg tgcgtggtgg ctcgtccctg
     1081 tcagccctac agacctcttt cgctgcatga agcatcgcga acgcatctcc cgttaccgtc
     1141 atctgcgcga acagccccag tggaagctgc tcgccgccga ccacgccccg gaaatcatcg
     1201 gcctgctgca gggcctgctg atggacggcg agcgcacgct gtcgtcgtcg gtgctcaacg
     1261 agcgcctgca acgcgcgctg gaccagctca acggcgacga actgtcgcgc gacctgccgc
     1321 gtaccgcgca ggcctacatc gcgcactggc tggcccaggg ctggctggaa cgccgcctgc
     1381 ccgagggtgc cgaccaggaa cagtacgaac tgtcgaccgc ggcgctgcag gcgatccgct
     1441 tcgccgatgg cctcgagcag gcccgcgtgg cggccaccga aagccgcctg gcgctggtca
     1501 tcgaacagct ctcgcagctg gcagcgcaga ccgaatccga tccggacgcg cgcctgtcgg
     1561 cgctgcgcga cgagcgtgac cgcatcgatg ccgagatcgc ccgcgtcggt gctggccgcg
     1621 tgatcgcgct ggatggcaag cgcgcgctgg aacgtgcgcg ccagatcatc ggcctggccg
     1681 acgaactgac cgaagacttc cgccgcgtgc gcgacgattt cgagcagctc aaccgtgatt
     1741 tccgcgaacg catcatcgac gatgaaggcg agcgcggtga cgtcctgtcg cagctgttcg
     1801 aaggcgtgga cgtgatcggc gagagcgatg ccgggcgcag tttccaggcc ttctggcgcc
     1861 tgctcaacga cgccgaacag agcgcccagc tcgatgccgc gctggaagca gtgctggcgc
     1921 gtggcttcgc gcgccgcctg gaccgcaacg aacgcaactt cctgcgtggc ttcaccagta
     1981 ccatgctcga gcgtggcggc caggtgcacg atgtgctgca gaacttcgcg cgcagcctgc
     2041 gcggtttcgt gcagagccgt ggctacctgg aacagcgccg cctcaaccag ttgttgaagc
     2101 aggcgcagtc cgaagcgctg gcactgcgcg atgagttccc ggcacagcgc ggcatcggcc
     2161 gcgacctgca gctgaccacc agccgcctgc gctcgtggtc gcagtggaag ctgcatgatc
     2221 cgcgcagtgc ccaggtcgat ggcaacgtcg agtacaacga cgccgccgcg atcagcctgg
     2281 agagcgtcgg cgacctggtc gcttcgtccg aaatcgactt ccgcaccctg cgccgcgacc
     2341 tgcacgacct gctcgatgca cagccgcggc tgagcatcgc ccaggccctg tcgcagcgcg
     2401 aagcgccgca gggcctgggc agtgtcattg gctacctgtc gctgggcacg cgcttcggca
     2461 acgtggtcgc cggcgagcag gagctcgcgc aatggcgtgg tggcgacggc caggtccgtc
     2521 gcgcccgcat cccgctggtt tggttcaccc aggagagacg ccatgagctg gcatgaagat
     2581 ccgatcgacg caccgcaggc cgacgtggcg gaagacgcct acgaggccga gccggtggcg
     2641 accgtggcgc agccccgccg tggcaacgac gtgtactacc tgggcgatac cgggcgcctg
     2701 ccgctggatg cgcgccgcgc gctgtgccag ctgctgatcg gccccagcat cgaccagctg
     2761 cgccacgcca agctgtggcc ggcgctgatc cgcagtgaag ccgccatccg ctccgcgctg
     2821 gccgatctgt tcctggaact ggtgctggac cgcgacagcg gcgtggcctt cacccgccag
     2881 gccgacaccg aagacgttga tgcaccggta ctgctgcgca cctcgccgct gaccttcatc
     2941 gactcggtgc tgctgctgta cctgcgccag cagctggccg aggccgacgc gcggggcaac
     3001 cgcgcggtgg tcgccgacgc cgagatggcc gaagcgctgg ccatctacga aaagaacctg
     3061 tccaccgacc gcgccggctt caatcgccgc gtcgcctcgg cggtgcagaa gatgaaggac
     3121 aaccacatcc tgacccgcct cagcggccag gaagaccgcc acgaagtctc gccggcgctg
     3181 aagctgctgt tctccgccga agacgtgtcc cagctttcgg cggtctaccg ccagctgcgc
     3241 gaaaccccgg ccgccgaggc ctgagagacc cgaccatcgc atggctatct ccaagcacac
     3301 tcccgccctg ttcaacgaag gcctgccgga cccgcgcctg cagcagttcc gcatgcgccg
     3361 cctgcaggtg cacaactggg gcaccttcaa cggcctgacc gaggtaccga tcgccgagcg
     3421 cggcttcctg ttcgtcggcc gctccggctc gggcaagtcg accctgctcg atgccatgtc
     3481 cgcgctgctg acgccgccgg ccatcgtcga cttcaacgcc gccgcgcgtg aagccgagcg
     3541 cagcggccgc gaccgcaacc tggtgtccta cgtgcgtggc gcgtgggccg accagcagga
     3601 cagcggcacc ggcgaaatcg ccacccagta cctgcgcaag ggcgcgacct ggaccgcgct
     3661 ggtgctggaa taccgcgccg gcgacggccg cgtggtcagc ctggtgcgcc tgctgtggat
     3721 ctccggcaac ggcacctcgg ccggcgacgt gcgcaagcac tacatgatcg ccgagcgtcc
     3781 gttcgacatc gccaaggatc tcggcggctt cgacctggac ctgcgcaagc tcaagcagaa
     3841 gctgtccgac ctgcaccact tcgacacctt ctccggctac gccgagcgct tccgcgacct
     3901 gctcggcatc gacaacgaga tggcgctgcg cctgctgcac aagacgcagt cggcgaagaa
     3961 cctgggcgac ctcaacgtct tcctgcgcga cttcatgctc gacacgccga agaccttcga
     4021 cgccgccgag cgcttggtca gcgactttgc cgagctcgat ggcgcgcacc aggcggtggt
     4081 caccgcgcgc cgccaggtgg aaaccctgct gccggcacgt gcctactaca acgatctgaa
     4141 ggtaatgcac cgccagcgcg gcgacgacga agcgctgaag cttggcgtcg acagcttccg
     4201 cgaaagccgc cgccaggcgc tgatcgaagc gcgcctgcgc gagatggatg tgcgtgaccg
     4261 tggcctgctg ggcgaggaag cccagcgccg cgccgcactc gacaaccaca ccgagcgcct
     4321 ggccgaactg gaactgcagc gtcgccagca gggcggtgag cgcatcgagg aactggaacg
     4381 cgagcagggc cgcgccgaag ccgagcgcga ccgccgccag gccaagcgtg accaggccca
     4441 ggaagcggct cagcaattgc aggccgaact gcccggcgat gcccacggtt tcgcagagct
     4501 ggtcgagcgt gcgcagaacg aactgcagga ccgccagcgc gcctcggcag ccctggacga
     4561 tgcgatcagc gatcgcctcg gtggcaagcg cgatgacgaa cgccgcttcg gcgaagtgcg
     4621 cagtgaactg gaggcgatgc agcgcacgcc gtccaacatc ccggcgccga tgcagaagct
     4681 gcgcgcgcgc ctggccgagg aaaccggcat tgccgaagcg gcgctgccgt tcgtcggcga
     4741 gctgatccag gtccgctcgg aagagcaggg ctggcagggc gccatcgagc gcgtgctggg
     4801 cggcttcgcg ctgtcgctgc tggtcgatga caagcactac aacgacgtcg ccgagtgggt
     4861 gaaccgtacc cacctgggca tgcgcttcac ctactaccgc gtgcgccgca acgatgatgc
     4921 gtttgcccga gagccgtcgg cgaagtcgct gctgcacaag ctggaactgc gcgagcacgt
     4981 gttcgaaagc tggctgcgcc gcgagctggg caagcgcttc gactacgaat gcgtggacgc
     5041 caagcagctg cgcaacgtcg accgcggcat cacccgcgaa ggccaggtca agcatccggg
     5101 cgatcgtttc gagaaggacg atcgcagcgc cgtcggcgat cgccgccgct ggatcctcgg
     5161 cttcaacaac cacgacaagg tgggtgcctt cgagcgtgaa gcgcaggaac tggccaagcg
     5221 catcgccagc tgcgaaaccg atatcgcgcg cctgcgcggc cagcgtgacc gcgacaacga
     5281 gcgtcgcctg gcctgccacg aactggtgag catcagctgg aacgagatcg acatcgccgc
     5341 cccgcagcag cgcctgagcg atatcgaggc caccctgcgc gacctgcgcg aaggcaacgc
     5401 cgacctcgcc aagctggcca agcagatcga cgccgtgcgc gccgacatcg agcagtcccg
     5461 ccgtacctat gaagacgtcc gcgtcgagcg tggccagctg gtaaaggaac gtgaccgcct
     5521 cgaccgcgcg cgccagcaga gccgtgcact ggtgctgccg agcctggctc aggagcagga
     5581 ggccggcctg gccgagcgcc tgcaggagca gggcccgctc agcctggaaa cgctggaagc
     5641 gcacatgcgc caggtcagca atgcgctgaa tgaacagttg tcgtcgtcgc agcaggacct
     5701 gaaccgcatc gagaaccagc tgatcggctg cttccgtcgc ttcatccagc agtggccgga
     5761 ggagtcgggt gacttcaccg tgtcggtggc ctcggccgag gatttcctcg cccgtctcga
     5821 acggctggag cgtgatggac ttccgcagca cgaagaacgc ttcttcgacc tgctgcagaa
     5881 ccagagcaag aacaacctgc tggccctgca gcggcacagt gcagaggccc gcaagtcgat
     5941 cggccagcgc ctggacgaag tgaatgccag cctggaacag gtgccgttca accgcggcac
     6001 gctgctgacc atcgagctga gcgaccgccg cctgccggaa gtcggcgagt tccacctgca
     6061 gctgcgcgaa gtgctgtcgc aacagcagac cgagcagcgc gagctggccg aatcgcagtt
     6121 caccgtgctg cgccagctgg tcaaccgcct gggctcgcag gaaggcgagg acaagcgctg
     6181 gcgcgagctg gtgctggacg tgcgcatgca cgtggagttc atcggcgtcg aactggatgc
     6241 ggaaacgcgc cagcaggtcg agatctaccg cagcggcgcc ggcaagtccg gtggccagcg
     6301 ccagaaactg gccaccacct gcctggccgc agcactgcgc taccagctcg gcggcgccga
     6361 cagccagctg ccgagctacg ccgcggtggt gctcgacgag gccttcgaca aggccgacaa
     6421 cgagttcacc gcactggcga tgaacatctt cgacaatttc ggcttccaga tggtggtggc
     6481 caccccgctg aagtcggtga tgacgctgga accgttcatc ggtggcgcct gcttcgtcga
     6541 gatcagcggt cgccacgact ccggcgtgtt gctgatcgag tacgacgaag aaggcaagcg
     6601 gctgaagctg ccggagcgca gccgccagca ggccaacgaa ccggaagaag ccgaggcctg
     6661 acccggcc
//
LOCUS       DAOKIP010000210         6665 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.211,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000210 DAOKIP010000000
VERSION     DAOKIP010000210.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 6665)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6665)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6665
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.211"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(171..1868)
                     /locus_tag="QEL58_003405"
     CDS             complement(171..1868)
                     /locus_tag="QEL58_003405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Kef family K(+) transporter"
                     /protein_id="HDS1677839.1"
                     /translation="MHHDTDLINIVAVGLGLAFIFGALANKLRLSPLVGYLVAGICVG
                     PFTPGFVADQALANQLAELGVMLLMFGVGLHFSLKDLMAVKAIAIPGAIGQIAVATLL
                     GWGVASLMGWPAIHGVIFGFSLATASTVVLLRAMEERRLLETMRGKIAVGWLIVEDLA
                     CVLALVMMPVMAGVFGPDAAKESHSLGSVLADIGWTFVQLGLFVAVMLVVGRRVIPWI
                     LERIAGTGSRELFTLSVLAIALGVAFGSAMLFGVSFALGAFFAGMLLNESELSHKAAH
                     DSLPLRDAFAVLFFVSVGMLFDPNILIQHPWQVLATVLIIMFGKSAAAFFIVRAFGHP
                     TSTALTISASLAQIGEFAFIIAGLGVALQILPKEGQSLVLAGALVSIMLNPLVFGLLD
                     RWQAKQEQLPQPPEPEEATGPSRDLHDHAIVIGYGRVGSELAQVLRDRGVPVLVIDDN
                     KEHVEQAHAKGLAAIRGSAAADRVLAEAHPERAKIAVLAIPQPLEAGEALAKLRAINP
                     DLTLLARAHSDAEVKHLLEHGADGTVMAERELAYSLAEMIMSTPPYRNLGQHSIPVV"
     gene            complement(2069..4456)
                     /locus_tag="QEL58_003406"
     CDS             complement(2069..4456)
                     /locus_tag="QEL58_003406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005414285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDS1677840.1"
                     /translation="MTRKTSLIAAAVAVALGGSPFVAAAQQAGTAANTLDTVIVTGTR
                     VADRTVAESQSPIDIITPEILQSTGTGELATALSRALPSLNFPRPALTDGTSGVRPAQ
                     LRGLSPDQVLVLVNGKRRHTSAMINVNGSIGRGSSAVDINAIPIAAIERVEVLRDGAS
                     AQYGSDAIAGVINIVLKGSGRGGSLAVDYGQYSAGDGNKYQLSGDTGVEFGNGRGRVH
                     VAGQISQQDESNRAGPYQGTTPNTGNFPSIGQTTFIVGDPRVDATAASANASFDFSDH
                     VTGYASALLSNRDITSFAFYRSRNHNGQSALLAQTYPDGFVPEINQYSKDRSLVAGVK
                     GNTDNGWTWDLSLNHGENTLDFRTRNSINYSLGATSPRSFYDGTLKYQQDIFNADLTK
                     SLDWGLAYPVTLSFGGEYRKEKWDQNPGELNSYTGSGAQGFGGFTPTNEVHADRHNYA
                     VYAGLEADLTEKFSAGITGRYEDYSDFGDRFSGKLSARYAFTDKVALRATASSGFRAP
                     SLAQQGYQAVTSQFTNGVFVERGTFPTTSAAAQALGASPLKAETSTSYSLGLVLQPVD
                     RLYITVDAYQIDIDDRIALSSSITTNAASSALLTSLGLPQVTAFSYFTNGLDTRTRGV
                     DFVSSYTVPFAASSLELTAAYSYNDTEVRRVGGTPAVFGTLGLTQSLIGRDEIGRIED
                     SYPRDKAILSGIWRSDHWELGLAATRYGKFTVRNSATALRDQTYGDAWVVDASASYKP
                     SSNWTLTVGADNLLDKYPDRTEDLQNSTFGMLPYSNYSPFGFNGAYVYGRIKYTW"
     gene            4794..6659
                     /locus_tag="QEL58_003407"
     CDS             4794..6659
                     /locus_tag="QEL58_003407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATP-binding cassette
                     domain-containing protein"
                     /protein_id="HDS1677841.1"
                     /translation="MISLRNFALRRGERLLLSNVDLTLHAGYRVGVVGRNGAGKSSLF
                     AAVKGELEADKGDVDLPGKVRIASVAQETPSLPDPALSFVLGGDIEVAAVLAAEADAT
                     AREDWEAVAEAHTKMAELNAYDAEARAGKLLHGLGFPAETHHRAVSSFSGGWRVRLNL
                     ARALMMPSDLLLLDEPTNHLDLDAVYWLEQWLLKYPGTLLLISHDREFLDNVATHTLH
                     LHGGGAKLYPGGYTDFERQRAEQLRQQQIAHEKEQAERAHLQSFIDRFKAQASKAAQA
                     QSRMKRLAKLAGTEAVRAEREFRIEFAPPAKLPFSLIRLNHVEAGYGKDAVILHNVGF
                     GLEAGQRIGLLGPNGAGKTTLVKTLVGELAPIVGERMAHPDLKIGYFAQHTVESLHEG
                     QSPMEHFREIAPDAPNQSFRDFLGKWNFPGDRAFEPVDGFSGGERARLALALIAWQQP
                     NVLLLDEPTNHLDLEMREALAEALATFEGAIVMVSHDRHLIGLVCDTYWRVADGVVEP
                     FDGDLDAYAAWLRTRPQAQGTKARMEQVEEPVVVKTAPVAQVVQKKPVNPHKLAAAEA
                     KVAELEGALAELDRQLADPANYADATRMAVIGRDRETAAAQLEKAEAAWMELLES"
BASE COUNT         1128 a         2155 c         2302 g         1080 t
ORIGIN      
        1 acgagcaagc cgcggccaag cccccaagga tgggtttacg gcgtctcccg caaccggacc
       61 caccccgcca tcccacggaa tgtcagcttc tgcttttgtc gttgccgttg ccgttgctgt
      121 tgccgttgct tcggcaggtg cagggctgca agccctgcac acgctgcccc tcacaccacc
      181 ggaatactgt gctgccccag gttccggtac ggcggcgtcg acatgatcat ctccgccagc
      241 gaataggcca gctcgcgctc ggccatcacc gtgccatcgg caccgtgttc cagcagatgc
      301 ttcacctcgg catcgctgtg cgcacgcgcc agcagggtca ggtccggatt gatcgcgcgc
      361 agcttggcca gcgcctcgcc ggcttccagc ggctgcggaa tcgccaacac cgcgatcttc
      421 gcgcgctccg ggtgggcctc ggccagcacc cggtcggcgg cggcactacc acggatcgcc
      481 gccagaccct tggcgtgggc ctgctcgacg tgttccttgt tgtcatcgat gaccagcacc
      541 ggcacgccac ggtcgcgcag cacctgcgcc agttcgctgc cgacccggcc gtaaccgatc
      601 acgatggcgt ggtcatgcag gtcccgggac gggccagtgg cttcttccgg ctcgggcggc
      661 tgtggcaact gctcctgctt ggcctgccag cggtcgagca ggccgaacac cagcgggttg
      721 agcatgatcg agaccagcgc accggccagg accagcgact ggccttcctt cggcagaatc
      781 tgcagggcca cgccgaggcc ggcgatgatg aaggcgaatt cgccgatctg cgccaggctg
      841 gccgagatgg tcagcgcggt gctggtcggg tggccgaagg cgcgcacgat gaagaatgcc
      901 gccgctgact tgccgaacat gatgatcagc accgtggcca gtacctgcca cgggtgttgg
      961 atgaggatgt tcgggtcgaa cagcatgccg accgagacga agaacagcac cgcgaacgca
     1021 tcacgcagcg gcagcgaatc atgcgcggcc ttgtggctca gttccgattc gttgagcagc
     1081 atgccggcga agaacgcgcc cagcgcgaac gaaacgccga acagcatcgc cgagccgaac
     1141 gccacgccca gcgcgatcgc cagcaccgac aacgtgaaca gttcgcgcga accggtgccg
     1201 gcaatgcgtt ccaggatcca cggaatgacc cggcggccga ccaccagcat caccgccacg
     1261 aacaggccca gctgcacgaa ggtccagccg atgtcggcca gcacgctgcc cagcgagtgc
     1321 gattccttgg ccgcgtcggg gccgaacaca ccggccatca ccggcatcat caccagcgcc
     1381 agcacacagg ccaggtcttc cacgatcagc cagccgaccg cgatcttgcc gcgcatggtt
     1441 tccagcaggc ggcgttcctc catggcccga agcagcacca cggtactggc ggtggccagc
     1501 gagaatccga agatgacgcc gtggatggcg ggccagccca tcagcgaggc cacgccccag
     1561 ccgagcaggg tggccaccgc gatctggccg atggcgccgg gaatggcgat ggccttgacc
     1621 gccatcaggt ccttcagcga gaagtgcagg ccaacgccga acatcagcag catcacgccc
     1681 agttcggcca gctggttggc cagcgcctgg tcggcgacga agccgggggt gaacgggcct
     1741 acacagatgc cagcaaccag ataaccgacc agcggagaca agcgcagctt gttggccagc
     1801 gcgccgaaaa tgaaggcgag ccccaggcca acggccacga tgttgatcag gtcggtgtca
     1861 tggtgcatcg gctctcgcag aaatcggggg atgtcccgat tttcaccgat gaggccagat
     1921 acggcaaacc cgccggtcac acgccgtggc cggcgggttt gcccatgcat ttctcctcta
     1981 ccccccgcct tcggcgcgcc ccttcaacac gaaggggctt tgctccagat acggcgaggg
     2041 gttgccggcc agcggccggc actaccgctt accaggtgta cttgatgcgg ccgtagacat
     2101 acgcgccgtt gaagccgaac ggcgagtagt tgctgtaggg cagcatgccg aaggtggagt
     2161 tctgcaggtc ttcggtgcgg tccgggtact tgtccagcag gttgtccgcg cccacggtca
     2221 gggtccagtt gctgctcggc ttgtagctgg ccgaggcatc caccacccag gcgtcgccgt
     2281 aggtctggtc gcgcagcgcg gtggccgagt tgcgcacggt gaatttgccg tagcgggtgg
     2341 cggccaggcc cagttcccag tggtccgaac gccagatgcc gctcaggatc gccttgtcgc
     2401 gcgggtagct gtcttcgatg cggccgattt catcgcggcc gatcagcgac tgggtcaggc
     2461 ccagcgtgcc gaatactgcc ggggtgccgc cgacgcgacg cacttcggtg tcgttgtagc
     2521 tgtaggccgc ggtcagttcc aggctgctgg ctgcgaaggg cacggtgtag ctggacacga
     2581 agtcgacacc ccgggtgcgc gtatccaggc cgttggtgaa gtacgagaac gcggtcacct
     2641 gcggcaggcc gaggctggtc agcagcgcgc tgctggcggc gttggtggtg atgctggacg
     2701 acagcgcgat gcggtcatcg atgtcgatct ggtatgcgtc gacggtgatg tacaggcggt
     2761 cgaccggctg cagcaccagg cccaggctgt aggaggtgga ggtctcggcc ttcagcggcg
     2821 aggcgcccag tgcctgcgca gccgcgctgg tggtcgggaa ggtgccgcgc tcgacgaaca
     2881 cgccgttggt gaactggctg gtcactgcct ggtagccctg ctgcgccagc gacggcgctc
     2941 ggaagccgct ggaggcggtt gcccgcagcg cgaccttgtc ggtgaacgca tagcgcgccg
     3001 acagcttgcc ggagaaacgg tcgccgaagt ccgagtagtc ctcgtagcgg ccggtgatgc
     3061 cagccgagaa cttctcggtc aggtccgctt ccaggccggc gtagaccgcg tagttgtggc
     3121 ggtcggcatg cacttcgttg gtcggggtga agccgccgaa gccctgcgcg ccactgccgg
     3181 tgtacgaatt cagctcaccg gggttctggt cccacttctc cttgcggtac tcaccgccga
     3241 aggacagcgt gaccggatag gccaggcccc agtccagcga cttggtcagg tcggcgttga
     3301 agatgtcctg ttggtacttc agcgtgccgt cgtagaacga gcgcgggctg gttgcaccca
     3361 ggctgtagtt gatgctgttg cgggtgcgga agtccagggt gttctcgcca tggttcaggc
     3421 tcaggtccca ggtccagccg ttgtcggtgt tgcccttgac cccggccacc agcgagcggt
     3481 ccttggagta ctggttgatt tccggcacga agccgtcggg gtaggtctgc gccagcagcg
     3541 cgctctgccc gttgtggttg cgcgagcggt agaacgcgaa cgaggtgatg tcgcggttgc
     3601 tcagcagcgc gctggcgtag ccggtcacgt ggtcgctgaa gtcgaagctg gcgttggccg
     3661 aggcggcggt ggcatccacg cgcgggtcgc cgacgatgaa ggtggtctgg ccgatgctgg
     3721 ggaaatttcc ggtgttcggc gtggtgccct ggtacggccc ggcgcgattg ctctcgtcct
     3781 gctggctgat ctggccggcc acgtgcacgc ggccacggcc attgccgaac tcgacgccgg
     3841 tatcgccgga cagctggtac ttgttgccgt caccggccga gtactggccg tagtccaccg
     3901 ccaggctgcc gccgcggccg ctgcccttga gcacgatgtt gatgacgccg gcgatggcat
     3961 ccgagccgta ctgcgccgaa gcgccgtcac gcagcacttc cacgcgctcg atggcggcga
     4021 tcgggatcgc gttgatgtcc accgccgacg aaccacggcc gatgctgccg ttgacgttga
     4081 tcatcgccga ggtatggcgg cgcttgccgt tgaccagcac cagcacctgg tccggcgaca
     4141 ggccgcgcag ctgcgccggg cgcacgccgc tggtgccgtc ggtcagggcc gggcgcggga
     4201 agttcaacga gggcagggcg cgcgacagcg cggtggccag ttcaccggtg ccggtggact
     4261 gcaggatttc cggggtgatg atgtcgatcg gcgactgtga ttcggcgacc gtgcgatcgg
     4321 ccacgcgggt gccggtgacg atcaccgtgt ccagggtgtt ggcggcggtg ccggcctgct
     4381 gggcagcggc gacgaacgga gagccaccga gtgcgacagc gacggcggcg gcgatcaggc
     4441 tggtcttgcg ggtcatcggg atggggctcc ggttggcggg ggtggcaccg gaatcgacat
     4501 cacgggggtg aggcggacgg cggttgttgc ggtgcgcaag gcaggaatta acgggatatt
     4561 cagtggctgt caaatgccgg tcatcgaaaa aaacgttgca gcagcaacca tttagctcgc
     4621 acaggcacag gcggggaggg gagcccggga ggcgcgcggc gaggacgtgg gagagaggaa
     4681 cgtcggccgc cgcgcatccc gggacgcgtc aagtattcgt taacgctaga attgcgtcgc
     4741 aggaacagtg ctcaccagca cattccatcc ggttatatgg accccttccc ccgatgattt
     4801 cccttcgtaa tttcgccttg cgccgcggcg agcggctgct gttgtccaat gtcgacctga
     4861 ccctgcacgc cggttaccgg gtgggtgtgg tcggccgcaa cggtgctggc aagtccagcc
     4921 tgttcgcggc ggtgaagggc gagctggagg cggacaaggg cgacgttgac ctgcccggca
     4981 aggtgcgcat cgccagcgtg gcccaggaaa ccccgtcgct gcccgatccg gcgctgagct
     5041 tcgtgctggg cggcgatatc gaggtggccg cggtgctggc cgccgaagcc gacgccaccg
     5101 cccgcgagga ctgggaagcg gtcgctgagg cgcatacgaa gatggccgag ctcaacgcct
     5161 acgacgccga agcgcgcgcc ggcaagctgc tgcacggcct cggcttcccg gccgagaccc
     5221 accaccgcgc ggtgtcctcg ttctccggcg gctggcgcgt gcgcctgaac ctggcccgcg
     5281 cgctgatgat gcccagcgac ctgctgctgc tggacgaacc gaccaaccac ctcgatctgg
     5341 acgcggtgta ctggctggaa cagtggctgc tgaagtaccc gggtacgctg ctgctgatct
     5401 cgcatgaccg cgagttcctc gacaacgtgg ccacccacac cctgcacctg cacggtggcg
     5461 gcgccaagct ctacccgggc ggctacaccg atttcgagcg ccagcgcgcc gaacagttgc
     5521 gccagcagca gatcgcgcac gagaaagaac aggccgaacg cgcccacctg cagagcttca
     5581 tcgaccgctt caaggcacag gccagcaagg ctgcgcaggc acagagccgc atgaagcgcc
     5641 tggccaagct ggccggtacc gaagcggtgc gtgccgagcg cgagttccgc atcgagttcg
     5701 cgccgccggc caagctgccg ttctcgctga tccgcctgaa tcacgttgag gccggctatg
     5761 gcaaggacgc ggtgatcctg cacaacgtcg gtttcggcct ggaagcgggc cagcgcatcg
     5821 gtctgctcgg cccgaacggt gccggtaaga ccaccttggt caaaaccctg gtgggcgaac
     5881 tggcgccgat cgtcggcgaa cgcatggcgc acccggacct gaagatcggc tacttcgccc
     5941 agcacacggt ggagtcgctg catgaaggcc agtcgccgat ggagcacttc cgcgagatcg
     6001 cgccggatgc accgaaccag tcgttccgcg acttcctcgg caagtggaac ttccccggcg
     6061 accgcgcgtt cgagccggtc gatggcttct ccggtggcga gcgcgcgcgc ctggcactgg
     6121 cactgatcgc ctggcagcag ccgaacgtgc tgctgctgga cgaaccgacc aaccaccttg
     6181 acctggaaat gcgcgaagcg ctggccgaag cactggcgac cttcgagggc gcgatcgtga
     6241 tggtctcgca tgaccgccac ctgatcggcc tggtctgcga tacctactgg cgcgtggccg
     6301 atggcgtggt cgagccgttc gacggcgacc tcgatgcgta tgccgcgtgg ctgcgcaccc
     6361 gcccgcaggc gcagggcacc aaggcacgca tggagcaggt ggaagagccg gtggtggtca
     6421 agaccgcacc ggtggcgcag gtggtgcaga agaagccggt gaacccgcac aagctggccg
     6481 ctgccgaagc caaggtggcc gaactggaag gtgcactggc cgagctggac cgccagctgg
     6541 ccgacccggc caactacgct gatgccaccc gcatggcggt gatcggccgc gaccgcgaaa
     6601 ccgcggccgc gcagctggaa aaggccgaag cggcgtggat ggagctgctg gagtcctgat
     6661 catgc
//
LOCUS       DAOKIP010000211         6648 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.212,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000211 DAOKIP010000000
VERSION     DAOKIP010000211.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 6648)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6648)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6648
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.212"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..3824)
                     /locus_tag="QEL58_003408"
     CDS             complement(<1..3824)
                     /locus_tag="QEL58_003408"
                     /inference="COORDINATES: protein motif:HMM:TIGR01901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="filamentous hemagglutinin N-terminal
                     domain-containing protein"
                     /protein_id="HDS1677842.1"
                     /translation="MNRIYRLVFNPSLGQVQVAAELARGPRRCVPERSRTPLWLAPLT
                     AALLLTGSLQATAQTLPQNGSIVAGSGTINVNGSTMTVTQFTQSALFQWSSFNIGSSN
                     TVRFDQAAGSRSTAINLVTGSSASIISGQLLSNGQVFLLNPAGITFTGTASVNVGGLL
                     ASTLTPGAQGIPLDGGGLPPSFELGGAGAGAAVSNLGGTLTATAGGISLVGGSVFNNG
                     YIAAPLGNIDLVAAGAVTAVTGVSSAGMPSLAFVTTAASGIAGTGISNVGTLSARNIS
                     MTALMGPGLSATGINAGGTIIANAIDASDGSLTIRSSAPVAINNAVVTATAMSTVGSA
                     VMGGPVAVQMTGGSIDATTVNLNGGINGDVVLSGSIKADSIGIDANNITQTAGSLEGA
                     LQLDTQGRVTLGQASNAISRVGGHVGTDLTLATSTGLANSGALSVGGNTTLDAATGNI
                     TLTHAGNSFGNRVSAKGADVSLVGIGALNLGDIDARSLDAQGGSIALNGAITTSGNQA
                     YRSAVTLQGNATLQGGTILFDGTVDGSYQLGVDASGMATFSGAIGGSTALQGLNVSTG
                     NGARLFGDVSTLGTLGFSGPVRVYGERSLTSLIGSLTLGGTVDGDGGGLNLSARQLTI
                     GGEVGGAGAVGRLHGRADTIVLGSRLTSTGDILLQGNVVLDGNTQLISTGGGALTTDG
                     ISSNTAGGYNLAMKTAGQIQVYGNIQAADVSITGHLFNGQGIVSKGNLNIDSGISLTQ
                     MGSFQVDGRTSLSSAGDITVTDAGNRFGGEVSLSGRSARLRAGDLLLGSSTLSENLRL
                     DLTGGLQQAVGSMLDVGGTTHIDAGGAVNLDRTGGMGRPINRFGGAVSLRGRGSYISA
                     AGTLAFSDFDVDSLFATADVLQLPASGRSIGLQYFQGDVALTRDSVLDSQLGQINFRG
                     RIDGGYALTLTSGLNVVFAGDVGGNQALASLDSRGAGPLQLGGNITADGAIRLGNVNL
                     VANTPRVFSIRSNNGNLLAGRIDGSSDGRSSLALNAHGALELQSGVGTTPGAGLANLE
                     LKGASVIAQAIRTSGRLDVTSGTGFTQGGTLTVGGDASFSAGSGGDLMLDTMTNTFAG
                     KVALSGNQVRIRAQPGLALDGVTAAALDASSTGALSLANANVAGTAILDGTSLLIGQA
                     SIGGALVATARAGAINQGSGSLAIGNNSQLTAGTDIVLGGTGNQLGSALQVQGRDITL
                     SSSTALDLQNLQATRDVRLSGNGVRLGATSVQGALQVNSAAAITQSDALQVTGNSRFQ
                     AGSDITVDQAGNR"
     gene            complement(3834..5393)
                     /locus_tag="QEL58_003409"
     CDS             complement(3834..5393)
                     /locus_tag="QEL58_003409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014091395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ShlB/FhaC/HecB family hemolysin
                     secretion/activation protein"
                     /protein_id="HDS1677843.1"
                     /translation="MAARTGSQTLQVRGFRASDVGEHPQRGITPAHVQAVLDAYFARI
                     AQGADVAVLDFAQLQGAADAVTAAYRKAGFLVSVAYLPPQKLDAEGRIEVRVLEGRIG
                     KVVVQGNQRYRSHTLSNVAERLRGQPLRQADIDSALLYARDLPGVSVSSVLQPGENVG
                     ETDLVLVARESGRPYEISTSVDNHGTALTGRGRAQLGVTWNSPLGLGDVFAASGTYAF
                     DPQASRAGALSYSVPLQAVQGLSVLAGANRSELEVDDGILRGFRLKGPASQAYAGADW
                     KFINQPDLQVTSSARYIRESSRFEALGLVLSKQKYDVAEVGASVRHNDARWHGINLAQ
                     LSVRQSLRDRSADFDAINPTRDSRFNVVRLGLLRLQYLSRSQRLLFKFNGQYSNNSLP
                     ALEQFQVGGNDSVRGYAQGETLGDRGWYGALEYHVDAPGFGDVASPFRGVPWREVLEL
                     DVFADQARVFDIDGLEAPADLASVGMGATFRLRQWKNLELRVAAAKPTSALRPGDGRD
                     VRVYARLGLTF"
     gene            complement(5864..6310)
                     /locus_tag="QEL58_003410"
     CDS             complement(5864..6310)
                     /locus_tag="QEL58_003410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003489888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HDS1677844.1"
                     /translation="MYKRILIATDGSELADKGLAKGLELAKDLNAEVDIVTVSEPWAV
                     GMYDAMGWSVGYMNSPEYKADREEGAQKVLQPALAKAAEQGITANPVHVLDRYAADGI
                     IETAGERNSDLIVMTSHGRRGVTRVLLGSQTAEVLARSTLPVLVIR"
     gene            6497..6643
                     /locus_tag="QEL58_003411"
     CDS             6497..6643
                     /locus_tag="QEL58_003411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005411630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677845.1"
                     /translation="MQDNKPPAWSSQKAILVAAIIALAVLFGGYQIGKDMALRDNARQ
                     AAGR"
BASE COUNT         1087 a         2298 c         2147 g         1116 t
ORIGIN      
        1 cgattgccgg cctggtccac ggtgatgtcc gaaccggcct ggaagcggct gttgcccgtc
       61 acctgcagcg catcggactg ggtgatcgca gcggcgctgt tgacctgcaa tgcaccctgc
      121 accgaggttg caccgagccg cacgccgttg ccgctgagcc gcacgtcacg tgtggcctga
      181 aggttctgca ggtccagggc cgtgctgctg gacagggtga tgtcgcggcc ctgcacctgc
      241 aaggcactgc ccagctgatt gccggttcca cccagcacga tatcggtgcc ggccgtcagc
      301 tggctgttgt tgccgatcgc caggctgcca cttccctggt tgatggcacc tgcgcgtgcg
      361 gtcgccacca gcgcgccgcc gatgctggcc tgaccgatca acagggaagt gccgtcaagg
      421 atggcagtgc cggcaacatt ggcattggcc aacgacagcg cgcccgtgct gctggcatcc
      481 agcgcggcgg ccgtcacgcc atccagtgcc aggcccggct gcgcacggat tcgcacctgg
      541 ttgccgctca acgcgacctt gcccgcgaag gtgttggtca ttgtgtccag catcaggtcg
      601 ccaccgctgc cggcactgaa gctggcatcg ccaccgacgg tgagcgtacc gccctgggtg
      661 aacccggtgc cgctggtgac gtcaagccgg ccactggtgc ggatcgcctg cgcgatcacg
      721 cttgccccct tgagttcgag attggccagc cccgcgccgg gcgtggtgcc cacaccggac
      781 tgcagttcaa gcgcgccgtg cgcattgagc gccaggctgc tgcggccatc gctgctgccg
      841 tcgatacgac cggccaacag gttgccgttg ttgctgcgga tgctgaacac ccggggggtg
      901 ttcgccacca ggttgacgtt gcccaggcgg atcgcgccgt cggcggtgat gttgccgccg
      961 agctggagcg gacccgcacc acggctgtcg aggctggcga gcgcctgatt gccgcccacg
     1021 tcaccggcaa acactacgtt gagcccgctt gtgagcgtca gtgcgtatcc accatcgatg
     1081 cgcccccgga aattgatctg gccaagctgg ctgtccagca cgctgtcgcg ggtcagcgcc
     1141 acatcgccct ggaagtactg caggccgatg ctcctgccac tggcgggaag ctgcaagaca
     1201 tccgccgtcg caaacaggct gtccacatcg aaatcggaga acgccagcgt gcccgcagca
     1261 gagatgtagc tgccgcggcc cctcagtgac accgcgccgc caaaccggtt tatcggccgg
     1321 cccatgccgc ccgtcctgtc gaggttgacg gcgccgccgg catcgatatg ggtggtgccg
     1381 ccgacgtcca gcatgctacc caccgcctgc tgcagcccgc cggtgagatc cagccgcagg
     1441 ttctccgaca gcgtgctgct gcccagcagc agatcgcccg cgcgtagccg ggcgctcctg
     1501 ccgctcaggc tgacctcgcc accgaagcga ttgcctgcat cggtcacggt gatgtcgccc
     1561 gcactgctga gcgaggtccg gccatcgacc tggaaactgc ccatctgggt caggctgatt
     1621 ccggaatcga tgttgaggtt gcccttgctg acgatgcctt gaccgttgaa gagatgcccc
     1681 gtgatgctga catcggcggc ctggatgttg ccgtagacct ggatctggcc agcggttttc
     1741 attgccaggt tgtaaccacc ggcggtgttg ctggagatgc cgtcggtggt gagggcgccg
     1801 ccgccagtgc tgatcagctg cgtgttgccg tccagcacca cgttgccctg cagcaggata
     1861 tcgccggtgc tggtgaggcg gctgcccagc acgatggtat cggcgcgacc gtgcaggcga
     1921 cccaccgccc cggctcctcc cacctcgccg ccgatcgtga gctggcgtgc actcagattc
     1981 agaccgccac cgtcaccgtc gaccgttccg ccgagtgtga ggctcccgat gagcgaggtc
     2041 aggctgcgct caccgtacac gcgcaccggg ccagagaacc cgagcgtgcc cagcgtgctg
     2101 acatcgccga acaggcgcgc accgttgcca gtgctgacat tcaggccctg caatgcggtg
     2161 ctgccaccaa tggcaccgga gaacgtggcc attccgctgg cgtcgacgcc cagctggtag
     2221 ctgccatcaa cggtgccgtc gaacaggatc gtcccgccct gcagcgtcgc gttgccctgg
     2281 agtgtcactg cggaccgata ggcctggtta ccggacgtgg tgatcgcacc gttcagcgca
     2341 atgctgccgc cctgcgcatc caggctgcgc gcgtcgatat cgcccaggtt cagtgcaccg
     2401 atgccgacca gactgacatc ggctcctttc gcgctgaccc ggttgccgaa actgttgccg
     2461 gcatgggtca gggtgatatt gcccgtagct gcgtcgagcg tggtattgcc acctaccgac
     2521 agcgccccgc tgttcgccag gccggtcgag gtggccaggg tcaggtcggt accgacatgg
     2581 ccaccaacgc ggctgatggc attgctcgcc tgtcccaggg tcactcggcc ctgcgtatcc
     2641 agttgcagcg cgccctccag cgaacccgcg gtctgggtga tgttgttcgc gtcgattccg
     2701 atcgagtctg ccttgatcga gcctgacagc accacgtcgc cgttgatgcc gccattcaag
     2761 ttcacggtcg tggcgtcgat gctgccgccg gtcatctgga cggcgaccgg cccccccatg
     2821 acagccgatc ccaccgtgga catcgccgtg gccgtaacga cggcgttgtt gatcgccacc
     2881 ggtgcagaac tgcggatggt caggctgccg tcgctggcat cgatggcgtt ggcgatgatc
     2941 gtgccgcccg cgttgatgcc ggtagcggac agacccggtc ccatcaatgc cgtcatgctg
     3001 atgttgcgtg cactgagggt gccgacgttg ctgatgccgg ttcctgcgat gccactcgct
     3061 gcggtggtga cgaacgccag gcttggcatg ccggccgatg acacaccggt caccgcggtc
     3121 accgcacctg ccgccaccag atcgatgttg cccagcggtg cggcgatgta accgttgttg
     3181 aacaccgagc caccgaccag gctgatgccg ccggccgtag ccgtcagcgt acctcccagg
     3241 ttgctgaccg cggcaccggc ccctgcgccg cccagttcga aactgggcgg caacccacca
     3301 ccatccagcg gaatcccctg tgcgccgggc gtcagggtgc tggccagcaa cccgcccacg
     3361 ttgacgctgg cagtgccggt gaaggtgatg cccgccggat tgagcaggaa tacctgcccg
     3421 ttggacagca gctggccact gatgatgctc gccgacgagc cggtcaccag gttgatggcc
     3481 gtcgacctcg agcccgccgc ctgatcgaac ctgaccgtgt tgcttgagcc gatgttgaag
     3541 ctgctccact ggaacagcgc agactgtgtg aactgggtga ccgtcatggt gctgccattg
     3601 acgttgatcg ttcccgagcc cgcgacgatg ctgccattct gcggcagcgt ctgcgcggtg
     3661 gcctgcaggc tgccggtcag cagcagcgcc gcggtcaacg gtgccagcca aaggggagtg
     3721 cgtgatcgct ccgggacgca acgacgtggc ccgcgcgcga gctccgcagc gacctgcacc
     3781 tggcccagcg aaggattgaa gacgagtcgg tagatacggt tcatggtcgc tcctcagaag
     3841 gtcaggccaa gccgcgcata tacgcggaca tcgcggccgt cacccggtcg cagggcgctg
     3901 gtcggcttgg ccgccgccac gcgcagttcc aggttcttcc actggcgcag gcggaaggtc
     3961 gcgcccattc ccaccgatgc caggtcggcc ggtgcctcca gcccatcaat atcgaacacc
     4021 cgcgcctggt cggcgaacac atccagttcc agcacttcgc gccagggcac gccccggaac
     4081 ggcgaggcca catcgccgaa tcccggcgcg tcgacgtggt actccagggc cccgtaccag
     4141 ccacgatcgc ccagggtctc gccctgcgcg tatccccgca cgctgtcgtt gccaccgacc
     4201 tggaactgct ccagtgccgg caacgaattg ttgctgtact ggccattgaa cttgaacagc
     4261 aggcgctggc tgcggctgag gtactgcagc cgcagcaggc ccaggcgcac cacgttgaac
     4321 cggctgtcac gggtcgggtt gatcgcatcg aagtcggccg agcgatcgcg cagcgactgg
     4381 cgcacgctca actgcgccag gttgatgcca tgccagcgtg catcgttgtg gcgcacgctg
     4441 gcccccacct cggccacatc gtatttctgc ttggaaagaa ccagccccag cgcttcaaag
     4501 cgcgagcttt cgcggatgta gcgcgccgag ctggtcacct gcagatcggg ctggttgatg
     4561 aacttccagt cggcacctgc ataggcctgc gacgccggtc ccttgagcct gaagccgcgc
     4621 aggatgccgt cgtccacttc cagctcgctg cggttggcac cggccagcac cgacaggccc
     4681 tgcaccgcct gcaatggcac gctgtaggac agtgctccgg cacggctggc ctgtggatcg
     4741 aacgcatagg taccactggc ggcgaacaca tcgcccaggc ccagcgggct gttccaggta
     4801 acccccagct gggcacggcc acgcccggtc aacgcggtgc catggttgtc cacgctggtg
     4861 ctgatctcgt agggccggcc gctttcacgc gcgaccagca ccaggtcggt ttcaccgacg
     4921 ttctcgccag gttgcagcac cgaggaaacg gaaacccccg gcaggtcacg cgcgtacagc
     4981 aacgcgctgt cgatgtcggc ctggcgcaac ggctgcccac gcaggcgttc ggccacgttg
     5041 ctgagcgtat ggctgcggta acgctggttg ccctgcacca ccaccttgcc gatgcggcct
     5101 tccagcacgc gcacttcgat gcggccttcg gcatcgagct tctgcggcgg caggtaggcg
     5161 acgctgacca ggaaacccgc cttgcgatag gccgccgtca ccgcgtccgc cgccccctgc
     5221 aactgggcga agtccagcac cgccacgtcg gcgccctgcg caatacgcgc gaagtacgca
     5281 tccagcacag cctggacgtg ggcgggcgtg atgcctcgtt gtggatgctc accgacgtcg
     5341 ctggcgcgga aaccgcgcac ctgcagggtc tggctgccgg tacgcgcggc catgtcgggc
     5401 aaccgggtgt ccgctggccc gtcggccggc ggggccgccg ccgcaacagg caatgctgca
     5461 gacagcagca acgcgaacga cgaacgcttc aacggcatca agatgtcctc caatgacggc
     5521 agatgtccaa ggcaacggac aacgctccgc cagtccccgg gcggagtgca tgaaaaagac
     5581 aggcgcagca gaacgcgctg gcagccagca ggcgatccgc ccacggccca gacatgcatg
     5641 cacctcaaca accccgcgcg gaggatgcca caaagaatga acggcgacgc gtgccgttcg
     5701 taaccgttcg tcggacacgc ccctgcaggg ccgatgtcga cggcacatgg atcgatctga
     5761 atgctcgtgc gccactcagg gcccacaaaa gatgacgccg gcgcgcatcc tgcggccggc
     5821 gtcgggtccc ctccccggga acgcttgaat cagcgtgtgt ggatcagcgg atgaccagca
     5881 ccggcagcgt gctgcgtgcc agcacttcgg cggtctggct gcccagcagc acgcgggtga
     5941 cgccacggcg gccatgcgag gtcatcacga tcaggtcgct gttgcgctcg cccgccgtct
     6001 cgatgatgcc gtcggcggcg tagcggtcca atacgtgcac cgggttggcg gtgatgccct
     6061 gctcggccgc cttggccagc gccggctgca gcaccttctg tgcgccttcc tcgcggtcgg
     6121 ccttgtactc ggggctgttc atatagccca cgctccagcc catggcgtcg tacatgccga
     6181 cggcccacgg ctcggaaacg gtcacgatat cgacctcggc attgaggtcc ttggccagct
     6241 ccaggccctt ggccaggccc ttgtcggcca gctcggaccc gtcggtggca atcaggatgc
     6301 gcttgtacat ggtggggctc cgtagcgatc tgccagatgg gaacgacacc attgcacacc
     6361 ggatgtgcag gccgcgcctt gagcaggatc aatccggcgc cgcgcagcgg cacgcgagca
     6421 tcgcccgctt gcacgcgccg gtcagtgcgg cgcatgctcg gcgggcggcg cactgccgcg
     6481 cccaaggacg accgacatgc aggacaacaa accgcccgcc tggagttccc agaaggccat
     6541 cctggtcgcc gcgatcatcg ccttggcggt gctgttcggc ggctaccaga tcggcaagga
     6601 catggcgctg cgcgacaacg cgcggcaggc ggccggccgc taacgggc
//
LOCUS       DAOKIP010000212         6644 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.213,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000212 DAOKIP010000000
VERSION     DAOKIP010000212.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 6644)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6644)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6644
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.213"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(90..704)
                     /locus_tag="QEL58_003412"
     CDS             complement(90..704)
                     /locus_tag="QEL58_003412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HDS1677846.1"
                     /translation="MIHLHYFDDALLVAEKPAGLLSVPGRSAENQDCVVARLQALYPD
                     ALTVHRLDQVTSGLLLHARGKEMQAALSMQFEQRQVSKRYEAVVQGLLEGEAGEVDLP
                     LIVDWPNRPKQMVDHERGKPALTRWRVLARDVEAQRTRMELEPVTGRSHQLRLHMASI
                     GHPIVGDVLYDAAPAQRVHLHASSLRFTHPVTGEALAFESATPF"
     gene            complement(790..1776)
                     /locus_tag="QEL58_003413"
     CDS             complement(790..1776)
                     /locus_tag="QEL58_003413"
                     /EC_number="1.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012439107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate dehydrogenase"
                     /protein_id="HDS1677847.1"
                     /translation="MKAPVRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLELP
                     VDKAQAALKGVMMELEDCAFPLLAGMVGTDDAEVAFKDADIALLVGARPRGPGMERKD
                     LLLENAKIFTAQGAALNKVASRDVKVLVVGNPANTNAYIAMKSAPDLKPENFTAMLRL
                     DHNRALSQLSTKLGKPVGGMEKLVVWGNHSPTMYPDYRFATADGASIADAINDQEWNA
                     NTFIPTVGKRGAAIIEARGSSSAASAANAAIDHVRDWVLGSNGKWVTMGVPSDGSYGI
                     PEGVIFGFAVTTENGKYTLVKDLPIDDFSQKYIDKTLAELEEERAGVAHLLG"
     gene            complement(1895..2386)
                     /locus_tag="QEL58_003414"
     CDS             complement(1895..2386)
                     /locus_tag="QEL58_003414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005993409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HDS1677848.1"
                     /translation="MSLIATFDTTQGPIKVELFADKAPLTVANFVNLVKHGFYDGLIF
                     HRVIADFMIQGGCPQGRGTGGPGYKFEDEKNGVKHEVGSLSMANAGPNTNGSQFFITH
                     IKTDWLDGRHTVFGKVLEGQAIVDSVKQGDVIHSITLEGDVDAVLAAQAERVAEWNKH
                     LAA"
     gene            2659..4506
                     /gene="typA"
                     /locus_tag="QEL58_003415"
     CDS             2659..4506
                     /gene="typA"
                     /locus_tag="QEL58_003415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016904579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translational GTPase TypA"
                     /protein_id="HDS1677849.1"
                     /translation="MSIENLRNIAIVAHVDHGKTTLVDQLLKQSGTLSERTVLAERVM
                     DSNDQEKERGITILAKNTAITWEDKKTGIKNRINIVDTPGHADFGGEVERVLSMVDTV
                     LILVDAMDGPMPQTRFVTQKAFAMGFKPIVVVNKVDRPGSRPEWVIDQVFDLFDKLGA
                     TNEQLDFPIVYASALNGYAGLEDTVRDGDMTPLYEAIMQHAPKPEVDPEGAFQMRISQ
                     LDYNNFVGVIGIGRIQRGTLKKNMQVAVIDREGKKRNGKVAQVLGFLGLERIEQDTAE
                     AGDIVAISGIPELTISDTLCHPDTPEALPALTVDEPTISMTFQVNNSPFAGNKDLSGG
                     KFLTSRQIKDRLDREKVHNVALKVEQLEDADKFLVSGRGELHLSVLIENMRREGYELA
                     VSRPEVIIKEIDGQMMEPIEQLVVDIEEIHQGGVMEKLGTRKGQLKNMEPDGKGRVRL
                     EYSIPARGLIGFQNEFKTLTQGSGLLFHVFDHYGPKEQGAIAKRINGVMIANAPGTTP
                     AYSLGPLQERGKLFAAEGDNVYEGQLVGIHSKDNDLTVNAIKTKPLTNMRASGKDDAI
                     QLTPAIKYSLEQALDFIEDDELVEITPKEIRLRKKFLTESDRKKASRGG"
     gene            4518..4985
                     /locus_tag="QEL58_003416"
     CDS             4518..4985
                     /locus_tag="QEL58_003416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019300716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2127 domain-containing protein"
                     /protein_id="HDS1677850.1"
                     /translation="MNQSGYNPDPHRHPGLHVIALLEASKAMLALLAATGLEVLGPQP
                     LRHGIMVLIRRFSLDPDHGTLPSLLHMISPDAVHLAAAGMIGYGLLHLVEAWGLWRAK
                     AWASWLGCLTASLYLPFDIFAIIRHPGWPSWTILAINLIVVYVLARDLRKRHR"
     gene            5027..>6644
                     /locus_tag="QEL58_003417"
     CDS             5027..>6644
                     /locus_tag="QEL58_003417"
                     /EC_number="3.5.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014036107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HDS1677851.1"
                     /translation="MRPSLPPLLTCLLAALPALLSAGCSPATSSAHAAEPASRNVPFP
                     YAETDVADLQARMTAGELDSTTLTQAYLQRIAALDRTGPRLRAVIELNPDALKEAAAR
                     DRERRDGRLRGPLHGIPLLLKDNINAAPMATSAGSLALQGFRPDDAYLVRRLRDAGAV
                     VLGKTNLSEWANFRGNDSISGWSARGGQTRNPYRLSHSPCGSSSGSAVAVAANLASVA
                     IGTETDGSIVCPAAINGVVGLKPTVGLVSRDGIIPISFSQDTAGPMARSVADAAAVLT
                     AIAGRDDADPATATMPGRAVYDYTARLDPQGLRGKRIGLLQTPLLKYRGMPPLIDQAA
                     AELRRAGAVVVQVELPNQGAWAEAERLVLLYEFKAGLERYFSTHHAPLRSLADLIAFN
                     QAHARQELGLFGQELLVEADATAGLADPAYIRARSDARRLAGPEGIDAALAAQQLDAL
                     VAPTTGVAWPIRSEGDDFPGESYSAAAVAGYPSLSVPMGQIDGLPVGLLFMGTAWSEP
                     KLIEMAYAYEQRTRARRPPHFDTDALIDAGE"
BASE COUNT         1157 a         2270 c         2147 g         1070 t
ORIGIN      
        1 cgccaaccca cggatagccc gcttttgacg ttgacgttga cgttgacgtt gattctgcag
       61 gtgcagggct gcaagccctg ccgccccacc tagaacggcg tcgcggactc gaacgcgagt
      121 gcttcgcctg tcaccggatg ggtgaaccgc aggctgctcg catgcagatg cacccgctgc
      181 gcaggcgcgg cgtcatacag cacgtcaccc acgatgggat ggccaatgct ggccatgtgc
      241 agccgcaact ggtggctgcg accggtgacc ggttccaact ccatgcgggt gcgctgcgct
      301 tcaacatcac gtgccagcac gcgccagcgc gtcagcgccg gcttgccgcg ttcgtgatcg
      361 accatctgct tcggccggtt cggccaatcc acgatcagcg gcaggtccac ttcgccggcc
      421 tcgccttcga gcagcccctg caccaccgct tcataccgct tgctgacctg gcgctgctcg
      481 aactgcatcg acaacgccgc ctgcatctcc ttgccacgcg catgcagcag caggccggag
      541 gtcacctggt ccaaccggtg cacggtcaat gcatccgggt acagcgcctg caggcgcgcg
      601 accacgcagt cctggttctc ggcgctgcgg ccgggcacgg acagcaggcc ggccggcttc
      661 tcggccacca gcagcgcgtc atcgaagtag tgcaggtgga tcatggggtt ccgtatccgt
      721 ccaaacaaaa acggggaagc cgaagcttcc ccgtcttctg cgtaccgacc ggagccggta
      781 ccgcctgcat cagcccagca ggtgggcgac gccggcgcgc tcttcttcca gctcggccag
      841 ggtcttgtcg atgtacttct ggctgaagtc gtcgatcggc agatccttca ccagggtgta
      901 cttgccgttt tcggtggtca ccgcgaagcc gaagatcacg ccttccggaa tgccgtagga
      961 gccatcggac ggcacgccca tggtgaccca cttgccgttg ctgcccagca cccagtcacg
     1021 cacgtggtcg atggcagcgt tggcggccga agcagccgag gacgagccgc gggcttcgat
     1081 gatcgccgcg ccgcgcttgc cgacggtcgg gatgaaggtg ttggcgttcc actcctggtc
     1141 gttgatcgca tcggcgatcg acgcaccatc ggcggtggcg aaacggtagt ccgggtacat
     1201 ggtcgggctg tggttgcccc acaccaccag cttctccatg ccaccgaccg gcttgccgag
     1261 cttggtcgac agctggctca gcgcgcggtt gtggtccagg cgcagcatgg cggtgaagtt
     1321 ttccggcttc aggtccgggg ccgacttcat ggcgatgtag gcattggtgt tggccgggtt
     1381 gccgaccacc agcaccttca cgtcacggct ggccaccttg ttcagcgccg cgccctgggc
     1441 ggtgaagatc ttggcgtttt ccagcagcag gtccttgcgc tccatgcccg ggccgcgcgg
     1501 acgcgcgccg accagcaggg cgatgtcggc gtccttgaac gcgacttcgg cgtcgtcggt
     1561 gccgaccatg ccggccagca gcgggaacgc gcagtcttcc agttccatca tcacgccctt
     1621 cagggcggcc tgggccttgt cgaccggcag ttccagcagc tgcaggatga ccggctggtc
     1681 cttgcccagc atttcgccgg aggcgatgcg gaacagcagg gcataaccga tctggccggc
     1741 ggcgccggtc acggcaacac gaacgggtgc tttcatgggg gtttcctctt gcttgcaagc
     1801 gtttgatggg acgccgcggg cgtggccacg caggcctggc gggcggcggg gaacagggaa
     1861 acggccaccc atgggtggcc gtttcgaagg gggatcaggc ggcgaggtgc ttgttccact
     1921 ccgccacgcg ctcggcctgg gcggccagca cggcgtcgac gtcgccttcc agggtgatcg
     1981 aatggatcac gtcgccctgc ttgaccgaat cgacgatggc ctggccttcc aggaccttgc
     2041 cgaacacggt gtggcggccg tccagccaat cggtcttgat atgggtgatg aagaactggc
     2101 tgccgttggt gttcgggccg gcgttggcca tcgacagcga gccgacctcg tgcttcacgc
     2161 cgttcttctc gtcttcgaac ttgtagcccg ggccaccggt gccacgaccc tgcgggcagc
     2221 cgccctggat catgaagtcg gcgatcacgc ggtggaagat caggccgtca tagaaaccgt
     2281 gcttgaccag gttcacgaag ttggccacgg tcagcggcgc cttgtcggcg aacagctcga
     2341 ccttgatcgg gccctgggtg gtgtcgaaag tggcgatgag ggacatgaag atccttgatg
     2401 cagaggggaa cgcgtctagc cacctagttt acacctgcct cgtggcggcg gcggcttcga
     2461 ccatgggcgc agatcccggc ttcagccgcc ggatgggcag cccagccacc ggcgccaggc
     2521 agcctcgacc gcagcggcgg gacccagctg aatgggcccc atgaccggcg tgaaatccac
     2581 cttttcgcga atcgtcaagt tcgacgtata atgttggact tctttttcca aatccggcgc
     2641 cgactggccc cctttcgtat gtccatcgaa aatcttcgca acatcgccat cgtcgcccac
     2701 gtcgaccatg gcaagaccac cctggtcgac cagctgctga agcagtccgg caccctgtcc
     2761 gagcgcaccg tcctcgccga gcgcgtgatg gacagcaacg accaggaaaa ggaacgcggc
     2821 atcaccatcc tggccaagaa caccgccatc acctgggaag acaagaagac cggcatcaag
     2881 aaccggatca acatcgtcga cacccccggc cacgccgact tcggtggtga ggtcgagcgc
     2941 gtgctgtcga tggtcgacac cgtgctgatc ctggtcgacg cgatggacgg cccgatgccg
     3001 cagacccgct tcgtgaccca gaaggccttc gcgatgggct tcaagccgat cgtggtggtc
     3061 aacaaggtcg accgcccggg ctcgcgtccg gagtgggtga tcgaccaggt cttcgacctg
     3121 ttcgacaagc tcggcgccac caatgagcag ctggacttcc cgatcgtcta cgcctcggcc
     3181 ctgaacggct atgccggcct ggaagacacc gtgcgcgacg gcgacatgac cccgctgtac
     3241 gaagccatca tgcagcacgc gccgaagccg gaagtcgatc cggaaggcgc cttccagatg
     3301 cgcatcagcc agctggacta caacaacttc gtgggcgtga tcggcatcgg ccgcatccag
     3361 cgcggcaccc tgaagaagaa catgcaggtc gcggtgatcg accgcgaagg caagaagcgc
     3421 aacggcaagg tcgcgcaggt gctgggcttc ctgggcctgg agcgcatcga gcaggacacc
     3481 gccgaagccg gtgacatcgt cgccatctcc ggtattccgg agctgaccat ctccgacacc
     3541 ctgtgccacc cggacacccc ggaagcgctg ccggcactga ccgtcgacga gccgaccatc
     3601 tcgatgacct tccaggtcaa caactcgccg ttcgccggca acaaggacct gtccggtggc
     3661 aagttcctga ccagccgcca gatcaaggac cgcctggacc gtgaaaaggt ccacaacgtg
     3721 gccctgaagg tcgaacagct ggaagacgcc gacaagttcc tggtctccgg ccgtggcgaa
     3781 ctgcacctgt cggtgctgat cgagaacatg cgtcgcgaag gctacgagct ggccgtgtcg
     3841 cgcccggaag tgatcatcaa ggaaatcgac ggccagatga tggagccgat cgagcagctg
     3901 gtggtggaca tcgaagaaat ccaccagggc ggcgtgatgg aaaagctggg cacccgcaag
     3961 ggccagctga agaacatgga gccggacggc aagggccgcg tgcgcctgga atactcgatc
     4021 ccggcccgtg gcctgatcgg tttccagaac gagttcaaga ccctgaccca gggttcgggc
     4081 ctgctgttcc acgtgttcga ccattacggt ccgaaggaac agggcgcgat tgccaagcgc
     4141 atcaacggcg tgatgatcgc caatgcgccg ggcaccacgc cggcctactc gctgggcccg
     4201 ctgcaggaac gcggcaagct gttcgctgct gaaggcgaca acgtgtatga aggtcagctg
     4261 gtcggcatcc actccaagga caacgacctg accgtcaacg cgatcaagac caagccgctg
     4321 accaacatgc gcgcttcggg caaggacgat gcgatccagc tgaccccggc gatcaagtac
     4381 tcgctggaac aggccctgga cttcatcgaa gacgacgagc tggtcgagat caccccgaag
     4441 gagatccgcc tgcgcaagaa gttcctgacc gaaagcgacc gcaagaaggc ttcgcgcggc
     4501 ggctgagcca gcaccccgtg aaccagagcg gctacaaccc ggatccgcac cggcatccgg
     4561 gtctccacgt catcgccctg ctcgaagcga gcaaggcgat gctggcgctg ttggccgcca
     4621 ccgggctgga agtgctcgga ccgcagccgc tgcggcacgg catcatggtc ctgatccggc
     4681 gtttcagcct ggatccggac catggcaccc tgccctcgct gctgcacatg atcagccccg
     4741 acgcggtgca cctggccgcg gcggggatga tcggctacgg cctgctgcac ctggtcgaag
     4801 cctggggact gtggcgggca aaggcctggg cctcctggct gggctgcctg accgcctccc
     4861 tgtacctgcc cttcgacatc ttcgcgatca tccggcaccc gggttggccg tcgtggacga
     4921 tcctggcgat caacctgatc gtggtctacg tcctcgcccg cgacctgcgc aagcgccatc
     4981 gctgagcagc ggctacactg gggattggag ccgaccaagc cgccccatgc gcccgtcctt
     5041 gccgcctctg ctgacctgcc tgctcgccgc gctgcctgcg ctgctttcgg ctggctgcag
     5101 cccggccacg tccagcgcgc atgcggccga acctgcgagc cgcaacgtgc cgttcccgta
     5161 cgccgaaacc gatgtcgccg atctgcaggc gcggatgacc gccggtgagc tggacagcac
     5221 caccctgacc caggcctacc tgcagcgcat tgcggccctg gaccgcaccg ggccgcgcct
     5281 gcgcgcggtg atcgagctca acccggatgc cctgaaggaa gccgcagcgc gcgaccgcga
     5341 gcgccgcgat ggccgcctgc gcgggcccct gcatggcatt ccgctgctgc tgaaggacaa
     5401 catcaacgcc gcgccgatgg ccaccagtgc cggctcgctg gccctgcagg gtttccgccc
     5461 ggacgacgcc tacctggtgc gtcggctgcg cgacgccggc gcggtggtgc tgggcaagac
     5521 caatctcagc gagtgggcca acttccgcgg caacgactcg atctcgggct ggagcgcgcg
     5581 cggtggccag acccgcaatc cctatcgact cagccactcg ccctgcggct ccagtagcgg
     5641 cagtgcggtg gccgtggccg ccaacctggc cagcgtggcg atcggcaccg agaccgacgg
     5701 cagcatcgtc tgcccggcgg cgatcaacgg tgtggtcggc ctgaagccga cggttggact
     5761 ggtcagccgc gacggcatca tcccgatctc gttcagccag gacaccgccg ggccgatggc
     5821 acgcagcgtc gccgatgcgg cggccgttct gaccgcgatc gccggccgcg acgacgccga
     5881 cccggcgact gcgaccatgc ccggccgcgc ggtctatgac tacaccgcgc ggctggaccc
     5941 gcagggcctg cgcggcaagc gcatcggcct gctgcagacg cccctgctga aataccgcgg
     6001 aatgccgccg ctgatcgacc aggccgccgc cgagctacgc cgtgccggtg ccgttgtggt
     6061 gcaggtggag ctgcccaacc agggcgcctg ggccgaggcc gaacgcctcg tgctgctgta
     6121 cgaattcaag gcagggctgg agcgctactt cagcacccac cacgcgccgc tgcgcagcct
     6181 tgccgacctg atcgccttca accaggcaca cgccaggcag gagctgggcc tgttcggcca
     6241 ggagctgctg gtcgaggccg acgccaccgc cgggctggcc gacccggctt atatccgtgc
     6301 acgcagcgat gcgcgccggc tggctggccc ggaaggcatc gatgccgccc tcgccgcgca
     6361 gcagctcgat gccctggtgg caccgaccac cggtgtggca tggccgatcc gcagcgaagg
     6421 cgacgacttc ccgggcgaga gctacagcgc cgcggctgtg gcgggctatc ccagcctcag
     6481 cgtgccgatg ggccagatcg acggcctgcc ggtcggcctg ctgttcatgg gcaccgcctg
     6541 gagcgagccc aagctgatcg agatggccta cgcctatgaa cagcgcaccc gcgcgcggcg
     6601 gccaccgcac ttcgatacag acgccctgat cgacgccggc gagc
//
LOCUS       DAOKIP010000213         6610 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.214,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000213 DAOKIP010000000
VERSION     DAOKIP010000213.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 6610)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6610)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6610
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.214"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(47..1963)
                     /locus_tag="QEL58_003418"
     CDS             complement(47..1963)
                     /locus_tag="QEL58_003418"
                     /EC_number="4.2.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015472018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphogluconate dehydratase"
                     /protein_id="HDS1677852.1"
                     /translation="MSLHPQLHAITERVIRRSAASRAAYLAAIDAALRDGPFRSRLSC
                     GNLAHGFAACGGTDKSRLRGGVTPNLGIITAYNDMLSAHQPFETYPEQIRKIARELGA
                     TAQVAGAVPAMCDGVTQGRGGMELSLFSRDVIAQATAIGLSHDMFDTTVHLGVCDKIV
                     PGLLIGALAFGHLPAVFVPAGPMTPGIPNKQKAEVRERYAAGEATREELLEAESASYH
                     GAGTCTFYGTANSNQVLLEAMGVQLPGASFVNPDTALRDALTREATERALDITALGDD
                     FRPLGRIIDERAIINAVIALMATGGSTNHTIHWIAVARAAGIVLTWDDFDELSQLIPL
                     LARVYPNGEADVNRFAAAGGPAFVFGELIKAGLMHGDLVSVARGGMADYAREPQLREG
                     KLVYLPGLERSADEEVVRSVDNPFESQGGLRLLRGNLGKSLIKLSAVKPQYRSIEAPA
                     VVVDAPQVLNKLHAGGLLPEHFVAVVRYQGPRANGMPELHSLAPLLGLLQNQGRRVAL
                     VTDGRLSGASGKIPAAIHVTPEAARGGPLAKVREGDMIRLDGEAGTLEVLVDAAEWAA
                     RSLAPNTAPAAHDLGRNLFAINRRVVGPADQGAISISCGPAAADGGPWDYDAEYELGH
                     DAAAAAAPHEAKDA"
     gene            complement(2022..2744)
                     /gene="pgl"
                     /locus_tag="QEL58_003419"
     CDS             complement(2022..2744)
                     /gene="pgl"
                     /locus_tag="QEL58_003419"
                     /EC_number="3.1.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012479767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphogluconolactonase"
                     /protein_id="HDS1677853.1"
                     /translation="MSPTFHDDRIEFIQHGDADGWIEAVAAEMAQTLNHDINEVGRAR
                     ILLSGGTTPAPVYQALAELDVHWDRVEVSLADERWLSPQDRDSNAWLVREHLLKRAEG
                     AHFDPLVRVGKPLPECVYTVNLQAQHSQPPSLVALGMGNDGHTASLFPGSKDLARALE
                     STLPYAALDATGCPGANQWPLRITLTPHGLRQCRQRLLLLRGKQKLQVLRQALDSNDA
                     QQYPILNAINLEGARLRVHWAD"
     gene            complement(2741..3748)
                     /locus_tag="QEL58_003420"
     CDS             complement(2741..3748)
                     /locus_tag="QEL58_003420"
                     /EC_number="2.7.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005416128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucokinase"
                     /protein_id="HDS1677854.1"
                     /translation="MSVGSQPVLVADIGGTNARFALADTSLDAPLLKDSIREYAVAEF
                     PSLGDAARHHLEQIGASAGRGVFAVAGRVDGDEARITNHPWVISRSRTAAMLGFDELH
                     LINDFAAQAMAISLLQPEDVIQVGGAAWVPGKPGQPRNYAVIGPGTGLGVGGLILRHG
                     RCYPLETEGGHVSFPPGTPEEIRILEILSEQFGRVSNERLICGPGLVNIHRAVCEMAG
                     IDPGQLQPVDVTARALHGDPQAMRTVDVFCAVFGAIAGDLVLTQGAWDGVFLTGGLTP
                     KMLDSLQHSGFRQRFEHKGRFSSIMARVPSLAVMHPHAGLLGAAAYAADAERDAPGVA
                     A"
     gene            complement(3745..5181)
                     /gene="zwf"
                     /locus_tag="QEL58_003421"
     CDS             complement(3745..5181)
                     /gene="zwf"
                     /locus_tag="QEL58_003421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010484333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate dehydrogenase"
                     /protein_id="HDS1677855.1"
                     /translation="MHDTLFLFGATGDLAQRYLFPSLLRLLGDGLLPEDFRIRALALS
                     GHDTEGFHDILRPRLQQAMPMATQDDIAGLLRRIDYRSVDLRDVDSVAAAVADLVHRK
                     CVSYLAIPPGLYISTCEGLAKGGALAAPARLMLEKPIGSDSESAEEIISTIGQWIDED
                     RVFRLDHYLGKAAVQNLIALRFGNTLLEAVWNRNYIESVHILVAESEGVDGRDAYYAR
                     SGALRDMVQSHILQLLCMVAMEPPASLEADRIRDEKVKVLRALRPLDAKHAARDSIRG
                     RYTAGTINGQPAQAYQPPEGSDVETFAGVTAHIDNWRWSGVPFHLVTGKRLPERTTRV
                     VVTLKPVTHWLFERPQRAQAAPNRLVFQLQPQENIELGLMSSLAGPEWGALELHPLEL
                     ELSVPTGLHRRIAYERLFLDAFNGNHTLFVRDDEVRAAWAWIDSVADAWKEARLPLEP
                     YPAGQWGPGNATEFLPQGVDAPDSGASA"
     gene            5535..>6610
                     /gene="ugpC"
                     /locus_tag="QEL58_003422"
     CDS             5535..>6610
                     /gene="ugpC"
                     /locus_tag="QEL58_003422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005416130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sn-glycerol-3-phosphate ABC transporter
                     ATP-binding protein UgpC"
                     /protein_id="HDS1677856.1"
                     /translation="MAKVQLQGVRKVYDNGQVAVKDASFEVADGELMVLVGPSGCGKS
                     TLLRMVAGLEEISGGTLTIGDRVVNDVAPKDRDIAMVFQSYALYPHMTVAENLAFGLK
                     LRGHDKATIDRRIAEAAQTLGLTEMMDKLPKAMSGGQRQRVALGRALVREPAVFLLDE
                     PLSNLDAKLRHSVRTEIAQLHRKLGTTMIYVTHDQVEAMTLGQRIVVLKDGVIQQIDT
                     PMALYDRPANLFVAGFLGSPAMNVLRGTLQGDAGGVTVVDGEWRAPLGQATIDPAWLQ
                     KPIAVGVRPEHLQPATADDAHAFNARIEGIEPVGNEIFVNLSSGQHALTMRVAPQVLP
                     AVGEQIRVAIHPQGLHFFNPETGER"
BASE COUNT         1043 a         2206 c         2306 g         1055 t
ORIGIN      
        1 gccagcaaac tcaccgccgc aacaaacccg caacgctctt caaccctcag gcgtccttcg
       61 cctcatgcgg cgccgccgct gccgccgcat cgtgccccaa ctcatactcg gcgtcgtaat
      121 cccacggccc accatccgcc gctgccggcc cgcacgaaat cgaaatcgcg ccctggtcgg
      181 ccgggcccac cacgcgacgg ttgatcgcga acagattgcg gcccaggtca tgcgctgccg
      241 gagccgtgtt cggcgccaac gaccgcgccg cccattcggc ggcgtccacc agcacttcca
      301 gcgtgccggc ttcaccatcc aggcggatca tgtcgccctc gcggaccttc gccagcgggc
      361 ctccgcgcgc cgcttccggc gtcacgtgga tggccgccgg aatcttgccc gaggcgccgg
      421 acaggcggcc gtcggtgacc agcgccacgc gccggccctg gttctgcagc aggcccagca
      481 gcggcgccag cgaatgcagt tccggcatgc cgttcgcacg cgggccctgg taacgcacca
      541 ccgccacgaa atgctcgggc agcaaaccgc cggcgtgcag cttgttcagc acctgcggcg
      601 catcgaccac caccgccggt gcctcgatgc tgcggtactg cggcttcacc gccgacagct
      661 tgatcagtga cttgcccagg ttgccgcgca gcaggcgcag gccaccctgg ctttcgaacg
      721 ggttgtcgac gctgcgcacc acctcttcat cggcactgcg ttccaggccc ggcaggtaga
      781 ccagcttgcc ctcgcgcagc tgcggctcgc gggcgtagtc ggccatgccg ccacgcgcca
      841 cgctgaccag atcgccgtgc atcaggccgg ccttgatcag ttcgccgaac acgaatgccg
      901 ggccaccggc ggcggcgaag cggttcacgt cggcttcgcc gttcgggtac acacgggcca
      961 gcagcggaat cagctgcgag agttcgtcga aatcatccca ggtcagcacg atgccggcgg
     1021 cccgcgccac cgcgatccag tggatggtgt ggttggtcga gccgcccgtg gccatcagcg
     1081 cgatgaccgc gttgatgatc gcacgctcgt cgatgatccg gcccagcggg cggaaatcgt
     1141 cgcccagcgc ggtgatgtcc agtgcgcgct cggtggcttc gcgggtcagt gcatcgcgca
     1201 gggcggtgtc cgggttgacg aacgacgcac ccggcagctg tacgcccatc gcttccagca
     1261 acacctggtt ggaattggcg gtgccataga aggtgcaggt gccggcgcca tggtacgagg
     1321 cggactcggc ctccagcagc tcctcgcggg tggcttcacc ggcggcgtag cgctcgcgca
     1381 cttcggcctt ctgcttgttc ggaatgcccg gggtcatcgg gccggccggc acgaacaccg
     1441 ccggcaggtg gccgaaggcc agcgcaccga tcagcaggcc cggcacgatc ttgtcgcaca
     1501 caccaaggtg gacggtggtg tcaaacatgt catggctgag gccgatggcc gtcgcctggg
     1561 cgatcacatc gcgcgagaac agcgacagtt ccatgccgcc acggccctgg gtcacgccgt
     1621 cacacattgc cggcaccgcg ccagccacct gtgcggtggc gcccagctcg cgggcgatct
     1681 tccggatctg ttcggggtag gtctcgaacg gctggtgcgc cgacagcatg tcgttgtagg
     1741 cggtgatgat gccgaggttc ggcgtcacgc cgccgcgcag ccggctcttg tcagtaccgc
     1801 cgcaggcggc gaagccatgg gcgaggttgc cgcagctcag gcggctgcgg aaggggccat
     1861 cgcgcagagc ggcgtcgatc gcggccaggt aggcggcgcg cgaggcggcg ctgcggcgga
     1921 tgacgcgctc agtgatggcg tgcagttgcg gatggaggct cattggctac cggcgttcgt
     1981 ggtggcgaga ggcaagcggc ggcagcgcgc cgccgccgac ttcaatcagc ccagtggacg
     2041 cgcaggcgcg cgccttccag gttgatcgcg ttgaggatcg gatactgctg ggcgtcgttg
     2101 ctgtccaggg cctggcgcag cacctgcagc ttctgcttgc cgcgcagcag cagcaggcgc
     2161 tggcggcact ggcgcaggcc gtgcggggtc agcgtgatgc gcagcggcca ctggttggca
     2221 ccggggcagc cggtggcatc cagcgccgca tagggcaggg tgctttccag cgcgcgggcg
     2281 aggtccttcg agcccgggaa cagcgaggcg gtgtggccgt cattgcccat gcccagcgcc
     2341 accaggctcg gcggctggct gtgctgggcc tgcagattga cggtgtagac gcattccggc
     2401 agcggcttgc cgacgcgcac caacgggtcg aaatgcgcgc cctcggcgcg cttgagcaga
     2461 tgctcgcgca ccaaccaggc gttgctgtca cgatcctgcg gcgacagcca gcgctcgtcg
     2521 gccaggctga cttcaacccg gtcccagtgc acgtccagct cggccagtgc ctggtacacc
     2581 ggcgccggcg tggtaccgcc agacagcagg atgcgggcgc ggcccacttc gttgatgtcg
     2641 tggttgaggg tctgtgccat ctcggcggcg accgcctcga tccagccatc ggcgtcgccg
     2701 tgctggatga actcgatgcg gtcgtcgtgg aaggtggggc tcatgcggca actcctggtg
     2761 cgtcacgttc ggcgtcggcg gcataggcgg cggcgcccag cagcccagcg tggggatgca
     2821 tcaccgccag cgacggcacc cgcgccatga tcgaagagaa gcggcccttg tgctcgaagc
     2881 gctggcggaa cccggagtgc tgcagcgaat caagcatctt cggggtcagg ccgccggtca
     2941 ggaacacgcc gtcccaggcg ccctgggtca gcaccaggtc accggcgatc gcgccgaaca
     3001 cggcgcagaa cacgtccacg gtgcgcatcg cctgcgggtc gccatgcagc gcacgtgcgg
     3061 tcacgtccac cggctgcagc tggcccggat cgatgccggc catctcgcac acggcgcgat
     3121 ggatgttgac caggccaggg ccgcagatca gccgttcgtt ggagacgcgc ccaaactgct
     3181 cggacaggat ctccaggatg cggatctcct ccggcgttcc cggcgggaaa ctgacatggc
     3241 cgccttcggt ttccagcgga tagcagcggc catggcgaag gatcaggccg ccgacgccga
     3301 gtccggtgcc gggtccgatc accgcgtagt tgcgcggctg tccgggtttg cctggtaccc
     3361 atgccgcgcc accgacctgg atcacgtctt ccggctgcag cagcgagatt gccatcgcct
     3421 gtgcggcgaa gtcgttgatt aggtgcagtt cgtcgaagcc gagcatcgcc gcggtgcggc
     3481 tgcgcgagat cacccacggg tggttggtga tgcgtgcctc gtcaccatcg acacggcccg
     3541 ccaccgcgaa cacgccacgg cccgcgctgg caccgatctg ttcgaggtga tgacgtgcgg
     3601 cgtcgcccag cgatgggaac tccgccactg cgtattcgcg gatgctgtcc ttcagcagcg
     3661 gcgcgtccag cgaggtatcg gccagtgcga aacgggcatt ggtgcccccg atgtcggcga
     3721 ccagcaccgg ctgcgagccg acactcatgc cgaggctcca ctgtccggcg catccacgcc
     3781 ctgcggcagg aactccgttg cgttgcccgg gccccactgg ccggcggggt agggttccag
     3841 cggcagcctg gcttccttcc aggcatcggc gacgctgtcg atccatgccc aggccgcgcg
     3901 gacttcgtcg tcgcgcacga acagcgtgtg gttgccgttg aaggcatcca ggaacaggcg
     3961 ttcgtaggcg atgcggcggt gcaggccggt cggcaccgac agttccagtt ccagcggatg
     4021 cagttccagc gcgccccatt ccgggccggc caggctgctc atcaggccca gctcgatgtt
     4081 ctcctgcggc tgcagctgga acaccaggcg gttcggtgcg gcctgcgcac gctgcgggcg
     4141 ctcgaacagc cagtgggtga ccggcttcag cgtgaccacc acgcgggtgg tgcgctcggg
     4201 caggcgcttg ccggtgacca ggtggaacgg cacgccgctc cagcgccagt tgtcgatatg
     4261 cgcggtgacg ccggcgaagg tttccacgtc gctgccttcc ggcggctggt aggcctgggc
     4321 cggctggccg ttgatggtgc cggcggtgta gcggccacgg atgctgtcac gcgcggcgtg
     4381 cttggcatcg agcgggcgca gggcgcgcag caccttgacc ttctcgtcgc ggatgcggtc
     4441 ggcttccagc gaggccggcg gctccatcgc caccatgcac agcagctgca ggatgtggct
     4501 ctggaccatg tcacgcagcg caccggaacg ggcgtagtag gcgtcgcggc catccacgcc
     4561 ttcgctttcg gcgaccagga tgtgcaccga ttcgatgtaa ttgcggttcc acaccgcttc
     4621 cagcagcgtg ttgccgaagc gcagcgcgat caggttctgc accgccgcct tgcccaggta
     4681 gtggtcgagg cggaacacgc ggtcctcgtc gatccactgg ccgatggtgg agatgatctc
     4741 ctcggcgctt tcgctgtcgc tgccgatcgg cttctccagc atcagccgtg ccggcgcggc
     4801 gagggcgccg cccttggcca ggccttcgca ggtggagatg tacaggcccg gcgggatggc
     4861 caggtagctg acgcacttgc ggtgcaccag gtcggcgacc gcggcggcca ccgaatcgac
     4921 gtcgcgcagg tccaccgagc ggtagtcgat gcggcgcagc agcccggcga tgtcgtcctg
     4981 cgtggccatc ggcatggcct gctgcaggcg cggccgcagg atgtcatgga agccttcggt
     5041 gtcatgcccg gacagggcca gtgcgcggat gcggaagtcc tccggcagca ggccgtcgcc
     5101 gagcaggcga agcagcgaag ggaacaggta gcgctgggcc agatcacctg tggcaccgaa
     5161 caggaagagg gtgtcgtgca tcgctcgagt ttcagatccg ggtgacatcg ttgtcaatcg
     5221 cttcatggct gggttcgggg gacatccgcg caactgcctg tccaaggttc gtcgggcggg
     5281 tttcccgggg ctccggaaga ccgttccaat cgaaaccact acctcggcgg aaccttcgtt
     5341 caatcgccga cgcagatcgg tgcgcaccga tcatcggata gtgccacgtg aaaacgttta
     5401 catggcagaa tgggcaactg tattcgattg cagtgctcgc cgccatgcgg tgggcgcgca
     5461 atcatcactg ccatcgggag ggccgaggca gtcccaaaag acagcccggc ttcgggcgga
     5521 ccggattagg tgatatggca aaagtgcagt tgcagggtgt gcgcaaggtc tatgacaacg
     5581 gccaggtcgc ggtgaaggac gccagcttcg aggtcgccga tggcgagctg atggtgctgg
     5641 tcggcccgtc cggctgtggc aagtcgaccc tgctgcggat ggtggctggg ctggaagaga
     5701 tcagcggcgg cacgctgacc atcggcgatc gcgtggtcaa cgacgtggcg ccgaaggatc
     5761 gcgacatcgc gatggtgttc cagagctacg cgctgtaccc gcacatgacc gtggccgaga
     5821 acctggcctt cggcctgaag ctgcgcggcc atgacaaggc gacgatcgac aggcgcatcg
     5881 ccgaggcggc gcagacgctg ggcctgaccg agatgatgga caagctgccc aaggcgatgt
     5941 ccggcggcca gcgccagcgc gttgcgctgg gccgcgcgct ggtgcgcgag ccggcggtgt
     6001 tcctgctcga cgagccgctg tcgaacctgg atgccaagct gcgccacagt gtgcggaccg
     6061 agatcgcgca gctgcaccgc aagctgggca ccaccatgat ctacgtgacc catgaccagg
     6121 tcgaagcgat gaccctgggc cagcgcatcg tggtgctgaa ggacggcgtc atccagcaga
     6181 tcgacacgcc gatggcgctg tacgaccgcc cggccaatct gttcgtggcc ggcttcctcg
     6241 gcagtccggc gatgaacgtg ctgcgtggca cgctgcaggg cgatgccggt ggcgtgaccg
     6301 tggttgacgg cgaatggcgc gcgccgctgg gccaggccac gatcgatccg gcgtggctgc
     6361 agaagccgat cgcggtgggc gtgcgccccg agcacctgca gccggcgacc gccgacgatg
     6421 cgcatgcgtt caacgcgcgc atcgaaggca tcgaaccggt cggcaacgag atcttcgtca
     6481 acctgagcag tggccagcat gcgctgacca tgcgcgtggc gccgcaggta ctgccggcgg
     6541 tgggtgagca gatccgcgtg gcgatccacc cgcaggggct gcatttcttc aacccggaaa
     6601 ccggcgagcg
//
LOCUS       DAOKIP010000214         6571 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.215,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000214 DAOKIP010000000
VERSION     DAOKIP010000214.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 6571)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6571)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6571
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.215"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..1089)
                     /locus_tag="QEL58_003423"
     CDS             complement(<1..1089)
                     /locus_tag="QEL58_003423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017155625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Glu/Leu/Phe/Val dehydrogenase"
                     /protein_id="HDS1677857.1"
                     /translation="MLFETLATTGHEQVVFCHNHDAGLKAIIAIHNTTLGPALGGVRM
                     RPYASTDEALADVLRLSRTMTYKNALAGLNVGGGKAVIIGDPKVDKTEVLFRAFGRYV
                     DSLGGRYITAEDVGTDVNDMENIYLESQFVTGVHQVHGGSGDPAPFTAYGALQALMAA
                     MRFKFGHEEVGKTSIAVQGLGHIGMELVKLLRDRGAKLYVTDLDSSLVDRAVSDFGAE
                     AVKPDEIHEVNADVFAPCALEGAINADTLPRIKAKIICGTANNQLSSLEIGDELHARG
                     ILYAPDYAVNAGGVMNVSLEIDGYNRERAMRLIRSIYHNLTRIFELSQRENIAPQRAA
                     DRIAESRILSIGKLKMPLGRSTPRLGNLR"
     gene            1369..2445
                     /locus_tag="QEL58_003424"
     CDS             1369..2445
                     /locus_tag="QEL58_003424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HDOD domain-containing protein"
                     /protein_id="HDS1677858.1"
                     /translation="MTPAWWRSLREWLARSTGAAPSRLAAASRQAVAAAAASLQGEAL
                     PPSEIAAHLQRGLHALALYPRLAGEPAPVQDPALGEAVARALQDRDWAARHLPRRPQL
                     LPQLIQTVNDDAASARVMAAIIGQDPVLTGNLLRIANSPAYKVHERPVESLQRAVTLV
                     GTEGVRQIISAVLVQPVMQVQCEVFPQFSTIIWEHALLASRAAADHARTVTFGDAFAA
                     QWLGLVQGLGAALVMRQLLQEAQARGETVEPALALQLLQQWSLPLAQRVAAAWELPEP
                     VHQALAPEADGPLADSLRLASAAAAASLLCRHGHASQNRMLALLEQLPSAPPHTLRWI
                     WRRLHGRSVETRDEAGQEQASPSP"
     gene            complement(2449..4053)
                     /locus_tag="QEL58_003425"
     CDS             complement(2449..4053)
                     /locus_tag="QEL58_003425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005414215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase D family protein"
                     /protein_id="HDS1677859.1"
                     /translation="MAWIYHRGMSPPKPLWQRLLRVAAIIVAALLLLVLSGLLLADHL
                     TPQAQGAPSHVLPLQPAQTRPAQTRIDQQIVPLQQAHPGKSGVAFLSDGMDAFAARAM
                     ITAHAGRSLDLQYYIWHDDLVGHLMAKALYDAAERGVRVRILLDDMNARDKDALMMAL
                     DAHPNIEIRLYNPFRNRSGIARTLELVQRAFSVNHRMHNKSWIADGRIAIVGGRNIGE
                     EYFSARDDVNFQDLDLVVAGPAVQQANRIFDDYWNSSTAIPISALASYSDEQLRQLVR
                     QSDLDALHARAQPYLQRVAASRGLQRPTPEPLHWSANVRIASDPPMKHRDDDRRHWLV
                     NTLSDELATTRRSALLISPYFVPGSDGVEGLSGLAARGAQVGVVTNSLAANDVAAVHG
                     GYMGYRVPLLKAGVQLYELKAHGQPDTSLFGSSGASLHTKAFVVDDRRGFVGSFNLDP
                     RSAYLNTEMGVLFDDPVLGAQLRDEYLRLASPAHSWWLALGHDDALRWLERQPPPHWV
                     EAEPGASLGKRWTARVISWLPVESQL"
     gene            complement(4145..4843)
                     /locus_tag="QEL58_003426"
     CDS             complement(4145..4843)
                     /locus_tag="QEL58_003426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005418190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding protein"
                     /protein_id="HDS1677860.1"
                     /translation="MEPIRLDKRLSALLGIPRGEARRYIEGGWVTVDGEVVEQPQRPV
                     DDNAVIVVAEQASDDKAERVSMLLHKPAGVAAETLCALVSSDSRSELDASGIRPLQRH
                     FHGLQLAASLPATDSGLVVVSQDPATLAHLQRNLGRTEQEYLIEVAKGGPERGPWLLA
                     RLQHESGGAKVSWQSEQRLRFAGKGLTAKGLRVAVTAAGLQVAAVRRLRIGRVALGPL
                     PPGQWRYLGSDERF"
     gene            complement(4900..5400)
                     /locus_tag="QEL58_003427"
     CDS             complement(4900..5400)
                     /locus_tag="QEL58_003427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005414217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HDS1677861.1"
                     /translation="MAVMKYLTGYPEPLVAQVSELLAQGKLGPWLQQRYPDPHEVRSD
                     RQLYDYTQELKDRYLRKSVPLNKVCYDNTLEVIKHALGTHTAISRVHGGRLKASREIR
                     IATVFRQAPAAFLRMIVVHELAHLKEADHNKAFYQLCQHMEPDYLQLEFDTRLYLTEL
                     ANRGQR"
     gene            5463..6020
                     /locus_tag="QEL58_003428"
     CDS             5463..6020
                     /locus_tag="QEL58_003428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012480957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2058 domain-containing protein"
                     /protein_id="HDS1677862.1"
                     /translation="MAKPNALQEQLLKAGLAKKSQASAAASAQAKARQGKAESTSAEV
                     QREAERARAEKVERDRALAAERNAQARQAEQKAQARQIISTHAVPHKGDDEYRFSDGA
                     AIRTLLIDPKLRKALSVGVLVIVAHGEGYALLPRAAAEKVRERAPEAIIVDHGQPGST
                     AEISTGNAEDDAYYAQFQVPDDLVW"
     gene            6191..6457
                     /locus_tag="QEL58_003429"
     CDS             6191..6457
                     /locus_tag="QEL58_003429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006452846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DksA/TraR family C4-type zinc finger protein"
                     /protein_id="HDS1677863.1"
                     /translation="MATGWAGDGAVQDQIDATVDDAIARARRQLRQGPGLEHCEECDA
                     PIPLARRQAVPGVRLCVACQQALDDEEHAHSGYNRRGSKDSQLR"
BASE COUNT         1042 a         2142 c         2334 g         1053 t
ORIGIN      
        1 gcgcaggttg cccaggcgcg gggtgctgcg gcccagcggc atcttcagct tgccgatcga
       61 caggatgcgg ctttcggcga tgcggtcggc ggcacgctgc ggcgcgatgt tctcgcgctg
      121 cgacagttcg aagatgcggg tgaggttgtg gtagatgctg cggatcaggc gcatcgcgcg
      181 ttcgcggttg tagccgtcga tctccagcga aacgttcatc acgccaccgg cgttgacggc
      241 gtagtccggt gcatacagga tgccgcgcgc atgcagctcg tcgccgattt ccaggctcga
      301 cagctggttg ttggcggtgc cacagatgat cttcgccttg atccgcggca gggtatcggc
      361 attgatcgcg ccttccagcg cgcacggcgc gaacacatcg gcgttgacct cgtggatctc
      421 gtccggcttg accgcttcgg cgccgaaatc gctgaccgca cgatcgacca ggctgctgtc
      481 cagatcggtg acatacagct tggcgccgcg gtcgcgcagc agcttcacca gctccatgcc
      541 gatgtggccc aggccctgca ccgcgatgct ggtcttgccc acttcttcat gcccgaactt
      601 gaagcgcatc gccgccatca gcgcctgcag cgcaccgtag gcggtgaagg gggcgggatc
      661 gccggagccg ccatggacct ggtgaacgcc ggtcacgaac tggctctcca ggtagatgtt
      721 ctccatgtcg ttgacgtcgg taccgacgtc ctcggcggtg atgtagcgcc cgcccagcga
      781 atcgacgtaa cggccgaagg cgcggaacag cacctcggtc ttgtccacct tggggtcgcc
      841 gatgatcacc gccttgccgc caccgacatt gaggccggcc agcgcattct tgtaggtcat
      901 cgtccggctc aaccgcagca cgtcggccag cgcctcgtcg gtgctggcgt aggggcgcat
      961 gcgcacgccg cccagggccg ggcccagggt ggtgttgtgg atggcgatga tcgccttcag
     1021 cccggcatcg tggttgtggc agaacaccac ctgttcatgg ccggtggtgg cgagggtttc
     1081 gaatagcatg gcatctccga tggcgcgaac agcggcgaac tgcggcgaac ggccagtgaa
     1141 cggtagggtc ccaaaaacaa aaaaagcgac gtcgtcggtg cagggggacg ggtcgcgcgg
     1201 cgccattcta gtccattcct ccggccgctg ccgtcgacat cggcggacgc ccggttaaag
     1261 aagatgaaag cgcggccgat gctgcgacga cggcgggtcg ccggattcgt gtgaagaggc
     1321 aggacggtca gtgacggcaa aggcagcaca acgacagggc gggcggcgat gacgccggcc
     1381 tggtggcgat cgctgcgcga gtggctggcg cgctcgaccg gggcggcgcc gtcgcggttg
     1441 gccgcagcat cgcggcaggc ggtggccgcc gctgcggcca gcctgcaggg cgaggcgctg
     1501 ccaccaagtg agatcgcggc gcacctgcag cgcggcctgc atgcgctggc gctgtatccg
     1561 cggctggccg gcgaacccgc gccggtccag gacccggcgc tgggcgaggc ggtggcacgc
     1621 gcgctgcagg atcgcgactg ggcggcccgg cacctgcccc ggcgtccgca gctgttgccg
     1681 cagctgatcc agaccgtcaa cgacgacgcg gcctcggcgc gggtgatggc ggcgatcatc
     1741 ggccaggacc cggtgctgac cggcaacctg ctgcgcattg ccaacagccc ggcgtacaag
     1801 gtgcacgagc ggcctgtgga aagcctgcag cgggcggtga ccctggtcgg caccgaaggc
     1861 gtgcgccaga tcatcagcgc ggtgctggtg cagccggtga tgcaggtgca gtgcgaggtg
     1921 ttcccgcagt tcagcacgat catctgggag catgcgttgc tggcctcgcg cgcggccgcc
     1981 gaccacgcac gcacggtcac cttcggcgat gctttcgccg cccagtggct gggcctggtg
     2041 caggggctcg gcgcggcgct ggtgatgcgc cagctgctgc aggaagcgca ggcgcgcggc
     2101 gaaaccgtgg agccggccct ggccctgcag ctgctgcagc agtggtcgtt gccactggcc
     2161 cagcgcgtgg cggcggcctg ggaattgccc gaaccggtgc accaggctct ggcaccggaa
     2221 gcggacggac cgctggccga cagcctgcgc ctggccagcg ccgctgcggc tgccagcctg
     2281 ctgtgcaggc acgggcatgc cagccagaac cgcatgctgg ccctgcttga acaactgccg
     2341 tcggcaccgc cgcataccct gcgctggatc tggcggcgcc tgcacgggcg cagtgtggaa
     2401 acgcgcgatg aggccgggca ggaacaggca tcgccgtcgc cctgagcgct acagctgcga
     2461 ttccaccggc agccagctga tcacccgtgc ggtccagcgc ttgcccaggc tcgccccggg
     2521 ttcggcctcc acccagtgcg gcggcggttg ccgctccagc cagcgcagcg catcgtcgtg
     2581 tcccagggcc agccaccagc tgtgcgcagg gctggccagg cgcaggtact cgtcgcgcag
     2641 ctgcgcaccc agcaccggat cgtcgaacag cactcccatc tcggtattga ggtaggccga
     2701 gcgcggatcg aggttgaacg agccgacgaa gccgcggcgg tcgtcgacca cgaatgcctt
     2761 ggtatgcagg ctggcgccgc tgctgccgaa caggctggta tccggctggc cgtgtgcctt
     2821 cagttcgtac agctgcacgc cagccttcag caggggtacg cggtagccca tgtagccgcc
     2881 gtgcaccgca gccacgtcgt tggcggccag cgaattggtg accacgccca cctgggcgcc
     2941 gcgcgcggcc agtcccgaaa ggccctccac gccatcgctg cctggcacga agtagggcga
     3001 gatcagcagt gcgctgcgac gggtggttgc cagctcgtcg ctgagcgtat tgaccagcca
     3061 gtggcggcga tcatcgtcgc gatgcttcat cggcggatcg gaggcgatgc gcacgttcgc
     3121 gctccagtgc aggggctccg gcgtaggccg ctgcaggccg cgcgatgcgg ccacgcgttg
     3181 caggtagggc tgcgccctgg catgcagcgc atccaggtcc gactgccgca cgagttgccg
     3241 cagctgttca tcgctgtagg aggccagcgc ggaaatcgga atggccgtgc tgctgttcca
     3301 gtaatcgtcg aagatccggt tggcctgctg cacggccggt ccggccacca ccaggtcaag
     3361 atcctggaag ttcacatcgt cgcgtgcact gaagtattcc tcgccgatgt tgcgcccgcc
     3421 gacgatggcg atgcggccat cggcgatcca gctcttgttg tgcatgcggt ggttcacgct
     3481 gaaggcgcgt tgcaccagct ccagcgtgcg tgcgatgcca ctgcggttgc ggaacgggtt
     3541 gtacaggcgg atctcgatgt ttggatgcgc atcgagcgcc atcatcagcg catccttgtc
     3601 cctggcgttc atgtcgtcga gcaggatgcg cacgcgcacg ccgcgttcgg cggcgtcata
     3661 cagcgccttg gccatcaggt ggccgaccag gtcgtcgtgc cagatgtagt actgcaggtc
     3721 caggctgcgt cctgcgtgcg cggtgatcat cgcgcgggcc gcgaacgcat ccatgccatc
     3781 gctgaggaag gccacgccgg acttgccggg atgggcctgc tgcagtggca cgatctgctg
     3841 gtcgatgcgc gtctgcgccg ggcgcgtctg cgccggttgc agtggcagca cgtgcgaggg
     3901 cgcgccctgt gcctgcggcg tgagatggtc ggccagcagc aggccggaca ggaccagcag
     3961 caacaaggcg gcgacgatga tcgcagcgac acgcagcagg cgttgccaca ggggcttggg
     4021 cggactcatg ccccgatggt agatccacgc catgcgtgga tgaaagccag aagacccgtt
     4081 gcaatggctc cacgacttgc gtggatggct tcttcaggca atgtcatgcc atgcgtggat
     4141 ggggtcagaa ccgctcgtca ctgcccaggt agcgccactg gcctggcggc agcggcccga
     4201 gtgccacgcg cccgatacgc aggcgacgca cggccgcgac ctgcagcccg gcggcggtca
     4261 ccgccacgcg caggcccttg gcggtcagcc ccttgccggc aaagcgcagg cgctgttcgc
     4321 tctgccagct gaccttggca ccgccggatt cgtgctgcag ccgcgccagc agccacggac
     4381 cgcgctcggg gccgcctttg gccacttcga tgaggtactc ctgctcggtg cggcccaggt
     4441 tgcgctgcag atgggcgagg gtggccgggt cctggctgac caccaccagg ccgctgtcgg
     4501 tcgccggcag cgatgccgcc agctgcagcc catgaaaatg acgctgcagc ggacggatgc
     4561 cgctggcatc aagctcgctt cggctgtcgc tgctgaccag cgcgcacagg gtttcggcgg
     4621 cgacgccggc cggcttgtgc agcagcatgc tgacccgctc ggccttgtca tcgctggcct
     4681 gctcggccac cacgatcacg gcgttgtcgt cgaccgggcg ctgcggctgt tccaccacct
     4741 cgccatcgac cgtgacccag ccgccctcga tgtagcgccg ggcttcgccg cgcgggatgc
     4801 cgagcagggc ggacaggcgt ttgtcgagac ggatcggttc catggcgggc ggttcggtca
     4861 ggtcgggcag ggggcgcgca gtgtagctgc tgcggccgct cagcgctggc cgcggttggc
     4921 cagctcggtc aggtacaggc gggtgtcgaa ttccagctgc aggtagtccg gctccatgtg
     4981 ctggcacagc tggtagaagg ccttgttgtg gtcggcttcc ttcaggtggg ccagttcatg
     5041 caccacgatc atgcgcagga atgccgccgg cgcctggcgg aacacggtgg cgatgcggat
     5101 ctcgcggctg gccttgaggc gaccgccgtg tacgcgggag atggcggtgt gggtgcccag
     5161 cgcgtgcttg atcacttcca gcgtgttgtc gtagcagacc ttgttgagcg gcaccgactt
     5221 gcgcaggtaa cggtctttca gttcctgggt gtagtcgtac agctggcggt cgctgcgcac
     5281 ctcgtgcggg tccgggtagc gctgctgcag ccaggggccg agcttgccct gcgccagcag
     5341 ttcactcacc tgggcgacca ggggttcggg atagccggtg aggtacttca tcactgccat
     5401 gcaggggggg cggggcgccg gtagaatggg gcctccaaga ttacacgcgg tacgcaacga
     5461 ccatggcaaa gcccaacgcg ctgcaggaac aattgctcaa ggccggcctg gccaagaagt
     5521 cgcaggccag cgccgccgcg agcgcgcagg ccaaggcccg ccagggcaag gccgaatcga
     5581 cctcggccga ggtccagcgc gaagctgaac gcgcccgcgc cgagaaggtc gagcgcgacc
     5641 gcgcactggc cgccgagcgc aatgcccagg ccaggcaggc tgaacagaag gcgcaggcca
     5701 ggcagatcat cagcactcat gccgtgcccc acaagggcga tgatgagtac cgcttcagcg
     5761 acggcgcggc gatccgcacc ctgctgatcg accccaagct gcgcaaggca ctgtcggtgg
     5821 gcgtgctggt cattgtcgcc cacggtgaag gctatgcgct gctgccgcgt gccgccgccg
     5881 agaaggtgcg tgaacgcgcc ccggaagcga tcatcgtcga ccacggccag ccgggctcga
     5941 ccgccgagat ctccaccggc aacgccgagg acgacgccta ctacgcccag ttccaggtgc
     6001 cggacgacct ggtctggtaa gcaaaaaggg gacggagggg attaagccgc aatcggcctg
     6061 atcgaacccg ttcgcatcct gttcgtcttc ctgaagagcg gccgagcatg gctcggctct
     6121 acatgaaggc ctgtcttttt gccggcgtgt atcgtcccca tatcaggcga cacacctgcg
     6181 gaggatggcc atggccaccg gttgggcggg agatggcgcg gtccaggacc agatcgacgc
     6241 caccgttgat gatgcgattg cccgcgcgcg gcgccagctg cgccagggtc cgggtctgga
     6301 acactgtgag gaatgcgacg cgccgatccc gttggcgcgg cgccaggccg tgcccggggt
     6361 acgcctgtgc gtggcctgcc agcaggcgct ggatgatgag gaacacgcgc acagcggcta
     6421 caaccggcgc ggcagcaagg acagccagct gaggtaaggg atgttcggca gggctgcgcc
     6481 ctgcacctgc agaagccagt gcaacagccg aagcaacggc aacagcgggc attccgcggg
     6541 ttggcggggc ggtgtcggag tgcggggacg c
//
LOCUS       DAOKIP010000215         6566 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.216,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000215 DAOKIP010000000
VERSION     DAOKIP010000215.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 6566)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6566)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6566
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.216"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            56..2233
                     /gene="yccS"
                     /locus_tag="QEL58_003430"
     CDS             56..2233
                     /gene="yccS"
                     /locus_tag="QEL58_003430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012481430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01666 family membrane protein"
                     /protein_id="HDS1677864.1"
                     /translation="MSARQSRLSRLWAHEKASYGLRVFIALTAAVAACWQLDALTALP
                     GVFLGIIASAIAETDDNWWGRTKAVLLSLLCFCIAAASVIWLFPWLWVFIGALALSTF
                     GLTLLGALGERYASIAQATVTLAIYTMIGLEQHGASDLHSALDAVSHLLAGAVWYGLL
                     SILWTALFANRPVRERVARLYQELGRYLQLKAALFEPVREADLQRRQLDLAEQNRRVV
                     GALNEAKTAILARFGRSGRPGVNSGLYLRLYYMAQDFHERASSSHYPYGALVDAFFHS
                     DVLYRCQRLLDLQGQACARLGEAIRLRRPFVYGENNQQAGRDLADALAYLRDQQRPQW
                     QRLLGSLDLLVHNLRSIERRLLDAERSEASLDNVDTRLRDSNPHTLREMGVRLRQQLT
                     PGSVLFRHGLRMALALIAGFAAIRLFNAQNGSWVLLTIVFVCRPNFGATRQRLAQRIV
                     GTLAGLVLTWALLQLFPQLHVQLLIALLSALLFFFTRTDRYLVASAAITVMALTCFNL
                     IGDGFVLIVPRMVDTVLGCAIAAAAAFLILPDWQGRQLHLVLARVLDTAARYLDSVLG
                     QYRSGMRDDLAYRIARRDMHNADAALSTALSNMLREPGHVRRNLDAGFHFLALSNTLL
                     GHLSALGAHRDQVDSYAGDPLALAAGDRVRKALQQLATALTARQPVAEDDNDADRAVA
                     AELEQIDEAMPPKLQLIRTQMALVLRLLPKVRAAANEAVTSLT"
     gene            2376..3170
                     /locus_tag="QEL58_003431"
     CDS             2376..3170
                     /locus_tag="QEL58_003431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019336618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HDS1677865.1"
                     /translation="MKIELGGRAALVTASTAGIGLAIAQGLAAAGATVVLNGRSADSI
                     ERARQHLLSTVPGAHVLGVAADLSDAAGVETLLAGLPKVDILVNNAGIFGPEDFFETD
                     DATWERYWQTNVMSGVRLSRALLPAMIDAGWGRVLFISSESARNIPADMIHYGVSKTA
                     QLSLSRGLAKRVAGSGVTVNAVLPGPTLSDGFAAMFEDERQRSGKPLEQIGREFVMEH
                     RPSSVIQRAATVEEVANMVVYLASPQASATSGAALRVDGGVVDDIV"
     gene            3325..5214
                     /locus_tag="QEL58_003432"
     CDS             3325..5214
                     /locus_tag="QEL58_003432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014038723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDS1677866.1"
                     /translation="MSGHNQFALLRQRRFLPFFVVQALGAFNDNVYRQAIISMLLFMA
                     VPEEELGLYATLAPAIFILPYFLFSALAGQIADKLEKSRLIVITTTMEIVIMSLAATG
                     FLTQSLPVLLIALFCTGMQSTLFGPVKYSVLPSVLKPEELTGGNGLVEMGTSMSILSG
                     MIVGGLVFTVAGSHGTVVAACAIIGLAICGNIAARLIPKVDAGDPNLKINWNPLPESL
                     AVLRMARQQKAVRNAILGVSWFWFVGTVLTSQLPAYAVTNLGGEPTLYIFALALFSVG
                     TGVGSLLCEKLSARTVEIGLVPLGAFGMTAFLLDLYFARSGEAAVHGLTVGTFLQQPG
                     SLRIVIDLIGIGLFTGIFVVPLFALIQSRTPKAQMSRVFAALNIQNSGFIVGAALLSL
                     AAHKLLHWTIPQQFLALAIANALVAIYIFTIVPEFLMRFLSWVMVRTLYRLRPHGIEA
                     NVPDEGAALLVCNHVSYMDALILSATIPRPVRFVMYYKIFNIPVMRWIFRTAKAIPIA
                     GAREDPALMQRAFDEIDAALAEGELVCIFPEGALTRDGTMAPFKSGVEKILERRPVPV
                     VPMALRGMWSSMWSRRDSRLGRMRVPRRFRATVEVVAAPAVDGHGTDAPALEARVRAL
                     RGDHA"
     gene            5396..5683
                     /locus_tag="QEL58_003433"
     CDS             5396..5683
                     /locus_tag="QEL58_003433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006398632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CD225/dispanin family protein"
                     /protein_id="HDS1677867.1"
                     /translation="MNQPPPLSRPVYIPNHLVWAILTTLFCCLPLGVVSIVYASQVDG
                     RRAAGDLPGAYSASRKAGWWAVASAVTLPVLLLLWFGLFGGLAVLGALSDQ"
     gene            5718..5996
                     /locus_tag="QEL58_003434"
     CDS             5718..5996
                     /locus_tag="QEL58_003434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005419785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CD225/dispanin family protein"
                     /protein_id="HDS1677868.1"
                     /translation="MNTATPQVPNNLVWAILTTLFCCLPAGIVSIVYAAQVNGKLAAG
                     DIAGAQDSAAKAKKWAIWSAIAWVVVVVLYVLFFVVLGGMGAMSNSGY"
     gene            6040..6465
                     /locus_tag="QEL58_003435"
     CDS             6040..6465
                     /locus_tag="QEL58_003435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2752 domain-containing protein"
                     /protein_id="HDS1677869.1"
                     /translation="MSALPARSRLARWAPLLVSAGLAVGATVVLRNVNPYVAGNPLPS
                     CPLYALTGLYCPGCGSTRCLYSLVHFDLPGAMAMNPLLVISLPFLLLMLLNIAGIRPR
                     VLDPLMRVLANPVFWLWVLPGYALLRNLPWPPFTALAPI"
BASE COUNT          952 a         2279 c         2137 g         1198 t
ORIGIN      
        1 ccatatttca cgcgcagccc gcaataatgg tggcagatcc ttccaccgag cctgcatgtc
       61 cgcccgacaa tcccgtctca gccgcctgtg ggcccacgag aaggccagtt acggcctgcg
      121 ggtgttcatt gccctcacgg cagcggtggc cgcgtgctgg cagctggatg cgctgaccgc
      181 cctgcccggc gtgttcctgg gcatcatcgc cagcgccatc gccgagaccg acgacaactg
      241 gtggggccgg accaaggccg tgctgctgtc actgctgtgc ttctgcatcg ccgcggcctc
      301 ggtgatctgg ctgttcccgt ggctgtgggt cttcatcggc gcgctggcgc tgtccacctt
      361 cggcctgacc ctgctcggtg cgctcggcga gcgctatgcg tccattgccc aggccacggt
      421 gacgctggcc atctacacca tgatcggcct ggagcagcat ggtgccagcg acctgcacag
      481 cgcgctggac gcggtcagcc acctgctggc cggtgcggtc tggtatggcc tgctgtcgat
      541 cctgtggacc gcgctgttcg ccaaccggcc ggtgcgcgag cgcgtggcac ggctgtacca
      601 ggaactgggc cgctacctgc agttgaaagc cgccctgttc gaaccggtgc gcgaggccga
      661 tctgcagcga cgccagctcg acctggccga gcagaaccgc cgcgtggtcg gcgcgctgaa
      721 tgaggcgaag acggcgatcc tggcgcgctt cggccgttcc ggccggcccg gcgtgaactc
      781 cggcctgtac ctgcgcctgt actacatggc gcaggatttc cacgaacgcg ccagttcttc
      841 gcattacccg tatggcgcgc tggtcgatgc cttcttccac agcgacgtgc tgtaccgctg
      901 ccagcgcctg ctcgatctgc agggccaggc ctgcgcgcgg ctgggcgagg cgatccgcct
      961 gcgccgcccg ttcgtgtatg gcgagaacaa ccagcaggcc gggcgcgacc tggccgatgc
     1021 actggcctac ctccgtgacc agcagcggcc acagtggcag cgcctgctcg gttcgctgga
     1081 cctgctggtg cacaacctgc gcagcatcga gcgccgcctg ctcgacgccg aacgctccga
     1141 ggccagcctc gacaacgtcg atacccgcct gcgtgacagc aacccgcaca cgctgcgcga
     1201 gatgggcgtg cgcctgcgcc agcagctcac gcccggctcg gtgctgttcc gccatggcct
     1261 gcgcatggca ctggcactga tcgccggctt cgcggcgatc cgcctgttca atgcgcagaa
     1321 cggttcatgg gtgctgctga ccatcgtgtt cgtgtgccgg cccaacttcg gcgccacccg
     1381 ccaacgcctg gctcagcgca tcgtcggcac gctcgccggg ctggtactga cctgggcact
     1441 gctgcagctg ttcccgcagt tgcacgtgca gctgctgatc gcattgttgt cggcactgct
     1501 gttcttcttc acccgcaccg accgctacct ggtggcgtcg gcagccatca cggtgatggc
     1561 actgacctgc ttcaacctga tcggcgatgg cttcgtgctg atcgtgccgc gcatggtcga
     1621 caccgtgctg ggctgtgcga tcgcagcggc ggcggcgttc ctgatcctgc ccgactggca
     1681 gggccgccag ctgcatctcg tactggcgcg cgtgctggac accgccgcac gttacctgga
     1741 ctcggtgctg ggccagtacc gcagcggcat gcgcgacgac ctcgcctacc gcatcgcccg
     1801 ccgcgacatg cacaacgccg acgcggcgct gtccaccgcg ctgtcgaaca tgctgcgtga
     1861 gcccggccac gtgcgccgca acctggacgc cggcttccac ttcctggccc tgtccaacac
     1921 cctgctcggc cacctgtcgg ccctgggcgc acatcgcgac caggtggaca gctatgccgg
     1981 cgatccgctg gcattggccg ccggtgatcg cgtgcgcaag gcactgcagc agctggcgac
     2041 ggcgctgacc gcgcggcagc cggtcgcgga ggacgacaac gatgcggatc gcgcggtcgc
     2101 cgccgagctg gagcagatcg acgaggcgat gccaccgaag ctgcagctga tccgcacgca
     2161 gatggcgctg gtgctgcgcc tgctgccgaa ggtacgggcg gcggccaatg aagcggtgac
     2221 cagcctgacc tgatccctca ccgctgaatc gggcgtgcca tccacgcatg gcgtgtatcc
     2281 accgcgccgc gtgcaacaac gcgttgcgcc ctgcgctgca tcccgatcac gccgccggat
     2341 cgatactggg gcatccccct gccctggatg tccccatgaa gatcgaactc ggcggccgcg
     2401 ccgcactggt caccgcctcc accgccggca tcggcctggc gatcgcgcaa ggcttggccg
     2461 cggccggtgc cacggtggtc ctcaacggcc gcagtgccga cagcattgaa cgcgcacgcc
     2521 agcacctgct ttccacggta ccgggtgccc atgtgcttgg tgtcgcggct gacctctcgg
     2581 atgcggccgg cgtcgaaacg ctgctcgccg gcctgcccaa ggtcgacatc ctggtcaaca
     2641 acgccggcat cttcggcccc gaggacttct tcgagaccga cgacgccacc tgggaacgct
     2701 actggcagac caacgtgatg tccggcgtgc gcctgtcgcg cgcactgctg ccggccatga
     2761 tcgatgctgg ctggggccgc gtgctgttca tctcctccga gtcggcgcgc aacattccgg
     2821 ccgacatgat ccattacggg gtcagcaaga ccgcgcagct gtcgttgtcg cgcggcctgg
     2881 ccaaacgcgt ggccggcagt ggcgtcaccg tcaatgccgt gcttccaggg ccgacgctct
     2941 ctgacggttt cgccgcgatg tttgaagatg aacgccagcg cagcggcaag ccgctggaac
     3001 agatcggccg cgagttcgtg atggaacatc gcccgtcctc ggtgatccag cgtgccgcca
     3061 cggtcgagga agtggccaac atggtggtgt acctggcctc gccgcaggcc tcggccacct
     3121 ccggcgcggc gcttcgcgtg gatggcggcg tggtcgacga catcgtctga gtcagccggc
     3181 aggtgtgcgg accaacggtc cgcacccaca ggtccgcacc caccgtcgtc gggcttcagt
     3241 agatccacgc catgcgtgga tgcatccggc catggtcccg gtggatgggc aggaatgcta
     3301 ggctgcgccg gtcaaggagg ctccatgtcc ggtcacaacc agttcgccct gctgcgccag
     3361 cgccgtttcc tgccgttctt cgtggtacag gcgctcggtg cattcaatga caacgtctac
     3421 cggcaggcga tcatcagcat gttgctgttc atggccgtgc cggaggagga actggggctg
     3481 tacgccacgc tggcgccagc catcttcatc ctgccgtact tcctgttctc ggcactggcc
     3541 gggcagattg ccgacaagct ggaaaaatcg cggctgatcg tgatcaccac caccatggag
     3601 atcgtgatca tgtcgctggc cgccaccggc ttcctgaccc agagcctgcc ggtgctgctg
     3661 atcgcgctgt tctgcaccgg catgcagtcg accctgttcg gcccggtgaa gtactcggta
     3721 ctgccgtcgg tgctcaagcc cgaggaattg accggtggca acggcctggt cgagatgggc
     3781 acgtcgatgt cgatcctgtc cggcatgatc gtcggcggac tggtattcac cgtggccggc
     3841 agccacggca cggtggtggc ggcgtgcgcg atcatcggcc tggccatctg cggcaacatc
     3901 gccgcgcggc tgattcccaa ggtcgacgcc ggcgacccga acctgaagat caactggaac
     3961 ccgctgccgg aatcgctggc ggtgctgcgc atggcgcgcc agcagaaggc ggtgcgcaac
     4021 gcgatcctgg gcgtgtcctg gttctggttc gtcggtaccg tgctgacctc gcagctgccg
     4081 gcctacgcgg tgaccaatct cggcggcgag ccgaccctgt acatcttcgc cctcgccctg
     4141 ttctcggtcg gcaccggcgt cggctcactg ctgtgcgaaa agctgtcggc acgcacggtg
     4201 gaaatcggcc tggtgccgct gggcgcgttc ggcatgaccg cgttcctgct tgatctgtac
     4261 ttcgcccgca gcggcgaggc cgccgtgcac gggctgaccg tcggcacctt cctgcaacag
     4321 cccggcagcc ttcgcatcgt catcgacctg atcggcatcg gcctgttcac cggcatcttc
     4381 gtggtgccgc tgttcgcgct gatccagagc cgcacgccga aggcacagat gtcacgcgtg
     4441 ttcgccgcgc tgaacatcca gaattccggc ttcatcgtcg gcgcggccct gctgtcgctg
     4501 gccgcgcaca agctgctgca ctggaccatt ccgcagcagt tcctggcact ggccattgcc
     4561 aacgcgctgg tggcgatcta catcttcacc atcgtccccg aattcctgat gcgcttcctc
     4621 agctgggtga tggtgcgcac cctgtaccgg ttgcgcccgc acggcatcga ggccaatgtg
     4681 cccgacgaag gcgccgcgct gctggtctgc aaccatgtca gctacatgga cgcgctgatc
     4741 ctgtcggcga cgatcccgcg cccggtgcgc ttcgtcatgt attacaagat cttcaacatc
     4801 ccggtgatgc gctggatctt ccgcaccgcc aaggccatcc cgatcgctgg tgcgcgcgaa
     4861 gacccggcat tgatgcagcg cgcgttcgac gagatcgatg ccgcgctggc cgagggcgag
     4921 ctggtctgca tcttcccgga aggcgcactg accagggacg gcacgatggc gccgttcaag
     4981 tccggcgtcg agaagatcct cgaacggcgg ccggtgccag tggtaccgat ggcgctgcgt
     5041 ggcatgtggt cgagcatgtg gagccgccgc gacagccgcc tcgggcgcat gcgcgtgccg
     5101 cgccgcttcc gcgccaccgt cgaggtggtg gcggctccgg ccgtggacgg ccacggcacc
     5161 gatgcccctg cgctggaagc ccgggtgcgc gccctgcgtg gggatcacgc ctgaccggaa
     5221 cggcccgcca ggcgggcccg gcgacctccc cgcatacgcc accgtccagt ggggagcacg
     5281 tcatgccgtg catgtaaacg catacatgca acgccggttg cggtagatta cgcacccaca
     5341 ggggggaggt ccggccgatg catcatggcc ggccaccaag gaatggagtc tcgctttgaa
     5401 tcaaccacca ccgctcagcc gtccggtcta catccccaac catctggtct gggcgatcct
     5461 gacgacgctg ttctgctgcc tgccgttggg cgtggtgtcg atcgtctacg cttcccaggt
     5521 cgatggccgc cgcgcggccg gcgacctgcc gggggcgtat agcgcgtcgc gcaaggcggg
     5581 ctggtgggcg gtggcttcgg ccgtgaccct gccggtcctg ttgctgttgt ggttcgggct
     5641 gttcggcggc ttggccgtac tgggcgctct ttccgaccaa tgattcacaa ccaccaccca
     5701 tcaaggagct tgaacccatg aacaccgcta ctccgcaggt cccgaacaac ctggtctggg
     5761 ccatcctgac caccctgttc tgctgtctgc cggccggcat cgtctcgatc gtctacgccg
     5821 cacaggtcaa cggcaagctg gctgcgggcg acatcgccgg cgcccaggat tcggccgcca
     5881 aggccaagaa gtgggccatc tggtcggcca ttgcctgggt cgtggtggtc gtgctgtacg
     5941 tgctgttctt cgttgtgctc ggcggcatgg gcgcgatgag caacagcggc tactgatacg
     6001 cctggacgga tccggcgcct gcgccggatc cgttgttgca tgtccgcgct tcccgcccgt
     6061 tcccgactcg cccgctgggc gccgctgctg gtctccgccg gcctggccgt gggtgccacg
     6121 gtggtgctgc gcaacgtcaa tccgtatgtc gccggcaatc ccttgccgag ctgcccgctg
     6181 tacgcgctga ccggcctgta ctgcccgggc tgtggcagca cgcgctgcct gtattcgctg
     6241 gtccatttcg accttccggg cgcgatggcg atgaacccgc tgctggtcat cagcctgccg
     6301 ttcctgttgc tgatgctgct gaacatcgcc ggcattcgcc cgcgcgtgct cgacccgctg
     6361 atgcgggtac tggccaatcc cgtgttctgg ctctgggtac tgcccgggta tgcgctgctg
     6421 cgcaacctgc cgtggccgcc gttcaccgcg ctggcaccga tctaggtttc cagccaacgg
     6481 cgcagcccct cgtggtgggt cggtatctga aggcagaagc ctaggggttg gccaggcggg
     6541 atgggtttgc gggggacgcc gtgaat
//
LOCUS       DAOKIP010000216         6525 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.217,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000216 DAOKIP010000000
VERSION     DAOKIP010000216.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 6525)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6525)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6525
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.217"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(66..890)
                     /locus_tag="QEL58_003436"
     CDS             complement(66..890)
                     /locus_tag="QEL58_003436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006384687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDS1677870.1"
                     /translation="MTTMLPPATALLAEMAGLAGCERAEGYACITARREHGASSVEIP
                     QPQFAILLEGRKQVRTAHQSLQFVPGDILLLTQRCRIDVVNSPDPHSGRYLSAIVPLC
                     AEVLAAARTLWNEELPSPGPAMARLPLIEHGAVLRQWRQSLQDGRYSDARLALASLVM
                     TLCRQGHGNLLLPQAPSLGEQIRDRIAAEPARDWQSRDVEEQFALSGATLRRRLAAEH
                     TSLRQLLTEARLAHGMQLLYTTDLPLKTVAARAGYRSAASFSKRFAEQYGLAPTDI"
     gene            complement(887..1591)
                     /locus_tag="QEL58_003437"
     CDS             complement(887..1591)
                     /locus_tag="QEL58_003437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014038469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VIT family protein"
                     /protein_id="HDS1677871.1"
                     /translation="MSRHSRHPELHRSERVGWLRAAVLGANDGIVSVAGLVVGVAASG
                     ASASTLLATGVAGTVAGAMSMAAGEYVSVQTQADTEAADLAAEKRELHEDPHSELEEL
                     SAIYRHRGLDPALARQVAEQLTAHDALGAHARDELGITDTLRARPLQAALASAGAFTC
                     GAALPVLTALLAPVHKVAMITTASTLLGLCLTGAMAAQAGGAPPVRGAVRVMFWGALA
                     MAAAAAVGRLLGAHVS"
     gene            1744..3108
                     /locus_tag="QEL58_003438"
     CDS             1744..3108
                     /locus_tag="QEL58_003438"
                     /EC_number="6.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003477658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--cysteine ligase"
                     /protein_id="HDS1677872.1"
                     /translation="MSSPSHVADTPITDRSQLVEVIASGEKPRTQWRIGTEHEKFGFR
                     LDDLRPPTFDGERGIEALLNGLVRFGWEPVQENGNTIALLRDGASVTLEPAGQLELSG
                     AALETIHQTCVETGTHLNEVAQVAGELQLGFLGMGFQPKWKRDEMPWMPKGRYKIMRS
                     YMPKVGSLGLDMMTRTCTVQVNLDYATEADMVKKFRVSLALQPIATALFADSPFTEGQ
                     PNGYLSYRSHIWTDTDADRTGMLDFVFEDGFGYERYVDYLLDVPMYFSYRDGTYHDAS
                     GQSFRDFMQGKLPVLPGALPTLRDWSDHMTTAFPEVRLKKYLEMRGADGGPWSRLCAL
                     PAFWVGLLYDDTALDAAWDLVRDFTLAERHALRDGVPKHAMNLPFRAGSVRDLAREAV
                     KISVEGLKRRGARNADGQDESKFLDVLQEIVESGLTPAERKLALFHGRWHGDVDPVFR
                     EFAY"
     gene            complement(3158..4414)
                     /locus_tag="QEL58_003439"
     CDS             complement(3158..4414)
                     /locus_tag="QEL58_003439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012512089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NnrS family protein"
                     /protein_id="HDS1677873.1"
                     /translation="MTKVKKAATARAQTSRMARLPSPAMLMRAPHRLLFFIGASNLLL
                     AMLWWALWLGALRGLWTPPPPPLPPAWLHALLMQYLVLPSFIFGFLLTVFPRWMGQPE
                     LPRSRYAPVGIGLFGGQALLVAAACGWAPGLWPGLLLALAGWSAGLIVLGRVLKAAGP
                     NRNWHAHACYAALLLGWLGLLLFMAVVQGHATLMPVNVALGTFGLLLPVYLTVAHRMI
                     PFFANNVVEGYVPWRPLRWLAAMWALLMLRLLLTALQIDNALWVADAPLLALALQALW
                     HWWPRGPMPGLLAALFLALAWLPISFALYLLQDIGQMLGHLQLLGRAPLHALAVGLFG
                     SLLVAMVTRVTQGHSGRPLVMPAVAWFAFVALQAVAIMRIIAELMPDAYAGHFAAAIG
                     WLLALAPWVAQLGWIYLSPRRDGKRG"
     gene            complement(4481..5539)
                     /locus_tag="QEL58_003440"
     CDS             complement(4481..5539)
                     /locus_tag="QEL58_003440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014038467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent alcohol dehydrogenase"
                     /protein_id="HDS1677874.1"
                     /translation="MSLARGYAAHSHTDPLIPYEFERRAVGPDDVRIEILYSGICHSD
                     LHQARDDWGGSIYPMVPGHEIIGRVTEVGSNVTRFKVGDHAGVGCMVDSCRHCDACEH
                     DLEQYCAEGATWTYNGRERQSGAPTYGGYSDHVVVEQRFVVKVSDTLDLKAAAPLLCA
                     GITTWSPLRHWKVGPGQKVGVIGLGGLGHMGVKFAKALGAHVVMITTTPEKGADAKRL
                     GADEVLVSRDAAQMKAHAGSFDFLLNTIPVGHDTNPYMGLLKREATMCLVGVLTELDP
                     PLTGGSVIFGRKHLTGSAIGGMAETQEMMDFCAEHGIVSDVEMIDIKNVNEAWERMAK
                     NDVRYRFVIDMATMKNAA"
     gene            5647..>6525
                     /locus_tag="QEL58_003441"
     CDS             5647..>6525
                     /locus_tag="QEL58_003441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006384681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDS1677875.1"
                     /translation="MATDNLSHLAAFAAVARHRSFRRAGAELALSTSAVSYAIRALEE
                     RLGVGLFHRTTRSVALTEAGQRLLERLQPALGQVHDALEEMNQFRAAPAGLLRINATR
                     AAVATQLGPRLARFLHAHPDVRVELTENDGLVDIVAEGYDAGVRLHEFIPEDMVAVPM
                     GPPLRGLIVGAPDYLRRRPAPQHPRDLAAHECIRFRFASGHLYKWQFERGGQALEIDV
                     PGRLTLGEQGTVVGAVLDGIGLAYVLEDTARPYIESGQMVAVLEDWSEPFAGFALYYP
                     KQRQMPGALRAFVDMLR"
BASE COUNT         1093 a         2163 c         2240 g         1029 t
ORIGIN      
        1 ggaatgcacg ctgttgctgt tgctgttgct tcggcgggtg cagggcgcag ccctgccgcc
       61 cccccctaaa tgtctgtggg agccagtccg tactgctcgg cgaagcgctt gctgaaactg
      121 gccgcagacc ggtagcccgc gcgtgcggcg acggtcttca acggcaggtc ggtggtgtag
      181 agcagctgca tgccatgcgc caggcgcgcc tccgtcagca gctggcgcag gctggtgtgc
      241 tcggcggcaa ggcggcgacg cagggtcgcg ccactcagtg cgaactgttc ttccacatca
      301 cgcgattgcc agtcgcgtgc cggttcggcg gcaatgcggt cgcggatctg ttcgcccagg
      361 ctcggtgcct gcggcagcag caggttgcca tggccctgcc ggcacaaggt catcaccagc
      421 gaggccaggg ccaggcgtgc gtcgctgtaa cggccatcct gcagtgattg ccgccactgg
      481 cgcagcacgg cgccatgttc gatcaacggc aatcgggcca tcgccgggcc tggactgggc
      541 agttcctcgt tccacagcgt gcgcgctgcc gccagcactt cggcacacag cggcacgatc
      601 gcgctgaggt agcggccact gtgcggatcg gggctgttga ccacgtcgat gcggcagcgc
      661 tgggtcagca gcaggatgtc gccgggcacg aactgcagcg actggtgtgc ggtgcgcacc
      721 tgcttgcggc cttccagcag gatcgcgaac tgcggttgcg gaatctcaac cgagctggcg
      781 ccatgctcgc ggcgtgcggt gatgcaggca tagccttcgg cacgttcgca gccggccagg
      841 ccggccattt cagccagcag cgcggtggct ggcggcaaca tggtagtcat gacacgtggg
      901 cacccagcag gcgaccgaca gcagcggcgg cggccatcgc caacgcgccc cagaacatca
      961 cccggacagc gccgcgcacg ggcggcgcac caccggcctg ggccgccatc gcgccggtca
     1021 ggcacaggcc gagcagggtg ctggcggtgg tgatcatcgc aaccttgtgg accggagcga
     1081 gcagggcggt cagcaccggc agcgcggcac cacaggtgaa tgccccggcc gaggccagcg
     1141 cggcctgcag tgggcgggca cgcagggtgt cggtaatgcc cagttcgtcg cgggcgtggg
     1201 cgcccagcgc gtcgtgggcg gtgagctgct cggcgacctg ccgcgccagc gccgggtcca
     1261 ggccgcggtg gcggtagatt gcactcagct cttccagttc actgtgcggg tcttcgtgca
     1321 attcacgttt ctcggccgcc aggtcggccg cttcggtgtc ggcctgggtc tgtaccgaga
     1381 cgtactcgcc ggcggccatc gacatcgcgc cggccacggt gccggccacg ccggtggcca
     1441 agagggtgct ggccgaggcg ccgcttgcgg ccacgccaac caccaggccg gccaccgaga
     1501 caatgccgtc gttggccccc agcacggcgg cacgcagcca gccgacacgc tcggagcggt
     1561 gcagttcggg gtgtcgtgaa tggcggctca tgaccttgag tgtacgaggg tcaagagggc
     1621 gtcggtagga tgctgaaacc cgtcaccgtc gcatgacgtg acggagtgcc acgctatagt
     1681 gcgcccttgc gatggaaggc ctccagcccc acatcccccg ccacagtcca gcgagccttc
     1741 cccttgtcga gccccagcca cgtcgccgat acgcccatta ccgaccgctc gcagctggtg
     1801 gaggtgatcg cctccggcga gaagccccgc acgcagtggc gcatcggcac cgagcacgag
     1861 aagttcgggt tccgcctgga tgacctgcgc ccgccgacct tcgacggcga gcgcggcatc
     1921 gaagcgctgc tcaacggcct ggtccgcttc ggctgggagc cggtgcagga aaacggcaac
     1981 accattgccc tgctgcgcga cggcgcctcg gtgacgctgg aaccggccgg ccagctggaa
     2041 ctgtccggcg cggcgctgga gaccatccac cagacctgcg tggaaaccgg cacccatctg
     2101 aacgaagtgg cgcaggtggc cggcgaactg cagctgggct tcctcggcat gggcttccag
     2161 ccgaagtgga agcgcgatga aatgccgtgg atgccgaagg gtcgctacaa gatcatgcgt
     2221 tcgtacatgc ccaaggtcgg ctcgctgggc ctggacatga tgacccgcac ctgcaccgtg
     2281 caggtgaacc tggactacgc caccgaagcg gacatggtga agaagttccg cgtgtcgttg
     2341 gcgctgcagc cgatcgccac cgcgctgttc gccgattcgc cgttcaccga aggccagccg
     2401 aacggctacc tgagctatcg ttcgcacatc tggaccgaca ccgacgccga ccgtaccggc
     2461 atgctcgact tcgtgttcga ggacggcttc ggctacgagc gctatgtcga ctatctgctc
     2521 gacgtgccga tgtacttctc ctaccgcgat ggcacctacc acgacgccag cgggcagagc
     2581 ttccgcgact tcatgcaggg caagctgccg gtattgccgg gcgcgttgcc gaccctgcgc
     2641 gactggtcgg accacatgac caccgcgttc ccggaagtgc gcctgaagaa gtacctggaa
     2701 atgcgcggcg ccgatggtgg cccgtggagc cgcctgtgtg cgctgccggc gttctgggtc
     2761 ggcctgctgt atgacgacac cgcgctggat gccgcctggg acctggtgcg tgacttcacc
     2821 ctggccgagc gtcatgcgct gcgcgacggt gtgccgaagc atgcgatgaa cctgccgttc
     2881 cgtgctggca gcgtgcgtga cctggcccgc gaagcggtga agatttcggt ggaaggactc
     2941 aagcgccgcg gcgctcgcaa tgccgacggc caggacgaga gcaagttcct ggacgtgctg
     3001 caggaaatcg ttgaatccgg gctgaccccg gccgagcgca agctggcgct gttccatggc
     3061 cgctggcacg gcgatgtgga tccggtgttc cgcgagttcg cttactgagt gattacggtg
     3121 gccgccgggc atggcccggc gctaccgctg gaggctgtca gcctcgcttg ccgtcgcgcc
     3181 gtgggctcag gtagatccag cccagctgtg ccacccacgg ggccaatgcc agcagccaac
     3241 cgatggcggc agcgaaatgc ccggcgtagg cgtcgggcat cagctcggca atgatgcgca
     3301 tgatcgccac cgcctgcagc gcgacaaacg caaaccaggc cactgccggc atcaccagcg
     3361 gccgtccgga atggccctgg gtgacccggg tcaccatcgc taccagcagg ctgccgaaca
     3421 ggcccacggc gagtgcgtgc agcggtgcgc ggccgagcag ctgcagatgg ccgagcattt
     3481 gaccgatgtc ctgcagcaga taaagcgcga agctgatcgg cagccacgcc agcgccagaa
     3541 acagggctgc gagcagcccg ggcatcggcc cgcgtggcca ccagtgccac agcgcctgca
     3601 gcgccagcgc cagcagcggt gcgtcggcca cccacaatgc gttgtcgatc tgcaatgcgg
     3661 tcaacagcag gcgcagcatc agcagtgccc acatcgcggc caaccagcgc agcgggcgcc
     3721 acggcacgta gccctccacc acgttgttgg cgaagaacgg gatcatccgg tgggcgacag
     3781 tgaggtagac cggcagcagc aggccgaacg tgccaagtgc cacattgacc ggcatcagcg
     3841 tggcgtggcc ctgcaccacc gccatgaaca gcagcaaccc cagccacccc agcagcagtg
     3901 cggcatagca ggcatgagca tgccagttgc ggttggggcc ggcggccttg agcacgcgtc
     3961 ccagcacgat cagtccagcg ctccagccgg ccagtgccag cagcaggccg ggccacagcc
     4021 cgggtgccca cccgcaggcg gcggcaacca gcagcgcctg cccgccaaac aagccgatgc
     4081 cgacaggcgc atagcggctg cgtggcagct cgggttgccc catccagcgc gggaacacgg
     4141 tgagcaggaa gccgaaaatg aagctgggca gcaccaggta ctgcatcagc agcgcatgca
     4201 gccaggccgg tggtagcggc ggtggcggcg gtgtccacaa tccgcgcaat gcgcccagcc
     4261 acaacgccca ccacagcatc gccagcagca ggttgctggc gccgatgaag aacagcagac
     4321 ggtgcggcgc acgcatcagc attgcagggg agggcaggcg ggccatgcgg gaagtctgcg
     4381 cccgggcggt ggccgccttc ttgaccttcg tcatgcccaa tgcaggacca gaaaaaaccc
     4441 cggcattgcc ggggtttttc atttttgcat ctgccttgga tcaggcggcg ttcttcatcg
     4501 tcgccatgtc gatcacgaag cggtagcgca catcgttctt cgccatgcgc tcccaggcct
     4561 cgttgacgtt cttgatgtcg atcatctcga catcgctgac gatgccgtgt tcggcacaga
     4621 agtccatcat ctcctgggtt tcggccatgc cgccgatcgc cgaaccggtc aggtgcttgc
     4681 ggccgaagat cacgctgcca ccggtcagcg gcgggtccag ctcggtcagc acgccgacca
     4741 ggcacatggt ggcctcgcgc ttgagcaggc ccatgtacgg gttggtgtca tggccgaccg
     4801 ggatggtgtt gagcaggaag tcgaagctgc cggcgtgcgc cttcatctgc gcagcatcgc
     4861 gcgacaccag cacttcgtcg gcgcccaggc gcttggcatc ggcacccttt tccggcgtgg
     4921 tggtgatcat caccacgtgt gcgccgagcg ccttggcgaa cttcacgccc atgtggccga
     4981 ggccaccgag gccgatcacg ccgaccttct ggcccgggcc gaccttccag tggcgcagcg
     5041 gcgaccaggt ggtgatgccg gcacacagca gcggcgcggc ggccttcagg tcgagggtgt
     5101 cggacacctt caccacgaag cgctgctcga ccaccacgtg gtcggaatag ccgccgtagg
     5161 tcggtgcgcc gctctggcgt tcacggccgt tgtaggtcca ggtcgcgcct tcggcgcagt
     5221 actgctccag gtcgtgctcg caggcgtcgc agtggcggca cgagtcgacc atgcagccga
     5281 cgccggcgtg gtcgccgacc ttgaagcggg tgacgttgct gccgacttcg gtcacgcggc
     5341 cgatgatctc gtggcccggc accatcgggt agatcgagcc accccagtcg tcgcgggcct
     5401 ggtgcaggtc ggagtggcag atgccgctgt agaggatctc gatacggaca tcgtccgggc
     5461 cgactgcgcg gcgttcgaat tcgtagggaa tcagcgggtc ggtatgtgaa tgggcggcgt
     5521 aaccacgggc gagggacatg gggaatcctt ggcagggttt gtcgaaaggc gttttacaat
     5581 acgccccgta cccagcggca agaagcccgg atatcggcat gattcatcaa gtgaaactgc
     5641 acaatcatgg ccactgacaa tctatcccac ctggccgcgt tcgcggcggt cgcccgtcac
     5701 cgcagcttcc gccgtgccgg cgccgagctg gcgctgtcga cctcggcggt gagctatgcg
     5761 atccgtgcgc tggaggaaag gctgggggtg ggcctgttcc accgcaccac ccgcagcgtg
     5821 gccctgaccg aggccgggca gcgcctgctg gaacgcttgc agccggcctt gggccaggtg
     5881 cacgacgcgc tggaagagat gaaccagttc cgcgccgccc cggccggcct gctgcgcatc
     5941 aacgccaccc gcgcggcggt ggcgacccag ctggggccgc ggcttgcgcg cttcctgcac
     6001 gcgcatccgg acgtgcgggt ggagctgacc gagaacgatg gcctggtcga tatcgttgcc
     6061 gaaggctacg acgccggcgt gcgcctgcat gagttcatcc ccgaggacat ggtggcagtg
     6121 ccgatggggc cgccgctgcg cgggctgatc gtcggcgcgc cggactacct gcggcgacgt
     6181 ccagccccgc agcatccgcg cgatcttgct gcacacgaat gcatccgctt ccgcttcgcc
     6241 agtggccatc tgtacaagtg gcagttcgag cgtggtgggc aggcgttgga gatcgacgtg
     6301 cccggaaggc tgacgctggg cgagcagggc accgtggtcg gcgcggtgct tgatggcatc
     6361 ggcctggctt acgtgctgga agacaccgcg cggccgtaca tcgaatcggg gcagatggtg
     6421 gcggtgctgg aagactggag cgaaccgttc gccggtttcg cgttgtacta cccgaaacag
     6481 cggcagatgc caggcgcgct gcgcgcattc gtggacatgc tgcgc
//
LOCUS       DAOKIP010000217         6504 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.218,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000217 DAOKIP010000000
VERSION     DAOKIP010000217.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 6504)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6504)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6504
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.218"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            36..2123
                     /gene="metG"
                     /locus_tag="QEL58_003442"
     CDS             36..2123
                     /gene="metG"
                     /locus_tag="QEL58_003442"
                     /EC_number="6.1.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019304414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine--tRNA ligase"
                     /protein_id="HDS1677876.1"
                     /translation="MTRTALVTTALPYANGPLHLGHLVGYIQADIWVRARRMSGGKAW
                     FVCADDTHGTPIMLAAEKAGVTPETFIANIQASHERDFAAFGVAFDHYDSTNSAANQA
                     LTEQFYLKLEAAGHISRRSVAQFYDPAKGMFLPDRYVKGICPNCGSPDQYGDNCEVCG
                     ATYAPTDLKEPRSVISGATPEMRDSEHFFFEVGHFDAFLRDWLAGDVALPGVKAKLGE
                     WLNAEGGLRAWDISRDAPYFGFQIPGQPGKYFYVWLDAPIGYLSSFQTLCGKLGEDFE
                     SHLRAGTSTELHHFIGKDIVNFHGLFWPAVLHGTGHRAPTRLHVNGYLTVDGAKMSKS
                     RGTFVMARTFLDAGLEPEALRYYYAAKSGGGVDDLDLNLGDFIARVNADLVGKFVNLA
                     SRCAGFISKRFDGQLAAQLPDAAQYQRFVDGLAPIREAYERNDPAAAIRLTMTLADEA
                     NRYIDDVKPWVIAKQEGADAQLQAVCSQGLNLFRVLVTALKPVLPATAAQAEAFLAAP
                     VNDWTDLVQPLLGHRITDYTPLFTRIDPKKIDAMIDASKDTLQPAAAAAPAAKADAAK
                     PAAPAPAPAKDEANSADAPAYIGIDDFAKLDLRIGKVLVCEFVEGSDKLLRFELDAGE
                     LGKRQIFSGIRGSYGEPEKLVGRSVVFIANLAPRKMRFGLSEGMILSAGFDGGALALL
                     DADSGAQPGMPVR"
     gene            2201..2791
                     /locus_tag="QEL58_003443"
     CDS             2201..2791
                     /locus_tag="QEL58_003443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006382522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HDS1677877.1"
                     /translation="MELALFDFDHTVTTCDTYGRFLRRVATAEQLAQAWWKVGPWLVA
                     YKLKLISAERIRARVTRLTFSDRHSDDITTLAAGFSREFLPEVVRPEMLEQIRWHKEQ
                     QHTVVIVSGSLDLYLKPWCEQLGLQLICNRLESQDGRLTGRYAGGDCGPRKVEHIRRQ
                     FDLSRYVRIHAYGDSSEDKPMLALAHERWFRGKPLK"
     gene            2816..3229
                     /gene="rnfB"
                     /locus_tag="QEL58_003444"
     CDS             2816..3229
                     /gene="rnfB"
                     /locus_tag="QEL58_003444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008264526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rnf electron transport complex subunit RnfB"
                     /protein_id="HDS1677878.1"
                     /translation="MSLTPPLTERLDRLLPQTQCGQCGYDGCRPYAQAMARGEAGVDR
                     CPPGGDAGARALAQVLGTPAIPFDRSRGEHKAAQVALIVEADCIGCTKCIQACPVDAI
                     VGGAKYMHTVIADLCTGCELCIPPCPVDCIEMLPL"
     gene            complement(3294..3641)
                     /locus_tag="QEL58_003445"
     CDS             complement(3294..3641)
                     /locus_tag="QEL58_003445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008264965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HDS1677879.1"
                     /translation="MMERYDVGPRMSEMTVYNKVAYLSGQIPEDTSQDITGQTRQVLA
                     EIDKLLALVASDRQHVLRAEVFLADIADFDGMNKAWDEWVVEGATPARATFEAKLAHA
                     EWKVEIVVTAAVP"
     gene            3834..6398
                     /gene="mprF"
                     /locus_tag="QEL58_003446"
     CDS             3834..6398
                     /gene="mprF"
                     /locus_tag="QEL58_003446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019336998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional lysylphosphatidylglycerol
                     flippase/synthetase MprF"
                     /protein_id="HDS1677880.1"
                     /translation="MTETTDPATASSTPAWKRVLTIVVPLLILALALHGLANEFDENG
                     YRAIRHAFHQLSGTQIALTVVLGLASYACLIGFDAIGLRRSGIRVHPARIGITAFLAH
                     TLGQTVGFAALTGGAVRLRGYRTAGLDLAQIGQVVLMSTLGFVFGAWLLISVALCMEP
                     EAAALALPLNPDAVRVVGIIALFAYLAMLLLVGREGRQFSVFGHGLWLPDRRTMIGVT
                     VLSVIELVLASAAFYVLLPDSTPTGLPGFVGLYLVAVLAGLVSTVPAGLGVFEWSLLK
                     LLPQVAPAAVLAAALIYRVTYYVLPLVLATLLALAPALRQPLQASAGATRTGWNALRP
                     WLPQIIALAVFSIGAALVIDGTLPTPRRHLVNASLPVLETSHLIGSLSGVALLLIGQG
                     LARRSHAAWMLAMAVCVVTPLPLWLRGGQWLIAVSAVLAAMALWAARREFYRQGALLD
                     EAWSWPWLRNLGLVLVAVTWLLFFTYSHVEYQNELWWEFAVSGNAPRALRALLVVAIA
                     LVMFGLARLLHSTRSPLPAADEATLQSLAPVLAGATDTQACLVLTADKAVLRDDAKQG
                     FVMMQRYGGSLIAMGDPVGPPEVARALIWRFREEADRLGLRPVFYQVGETYWQTYLDL
                     GLGLVKLGEEAMVPLHDFGLEGRERADLRQAWNRGKRSGLSFRVAPVEEIPSLLPRLH
                     AISNAWLDDKAGDEKGFSLGSYDPDYLARFPVALVEAEGQIVAFANLWQAPAGAELSV
                     DLMRHVNEAPKGTMDFLFIELFLWGRAQGYARFSLGMAPLSGLAQHRLAGRWNRLAGL
                     LARHGERFYGFSGLRRFKSKFDPQWRPRYLAAPGGMHLPAALLDATRLISLDPRRN"
BASE COUNT          984 a         2293 c         2126 g         1101 t
ORIGIN      
        1 tactctgcgg ttcccctcgg cttcaccccg cgaccatgac ccgtaccgcg ctcgtcacca
       61 ccgccctgcc ctacgccaac ggcccgctgc atctgggcca cctggtcggc tacatccagg
      121 ccgacatctg ggtgcgtgcg cggcgaatga gcggcggcaa ggcctggttc gtctgcgccg
      181 acgacaccca tggcacgccg atcatgctgg ccgcggaaaa ggccggggtc accccggaaa
      241 ccttcatcgc caacatccag gccagccacg agcgtgactt cgccgccttc ggcgtcgcct
      301 tcgatcacta cgactcgacc aactcggcgg ccaaccaggc gctgaccgag cagttctacc
      361 tgaagctgga agcggccggc cacatcagcc gccgttcggt ggcgcagttc tacgacccgg
      421 ccaagggcat gttcctgccc gaccgctacg tcaagggcat ctgcccgaac tgcggcagcc
      481 ccgaccagta cggcgacaac tgcgaagtgt gcggcgccac ctatgcgccg accgacctga
      541 aggagccgcg ttcggtcatt tccggtgcca ccccggaaat gcgcgattcg gagcacttct
      601 tcttcgaggt cggccacttc gatgcgttcc tgcgcgactg gcttgccggc gatgtcgccc
      661 tgccgggcgt gaaggccaag ctgggtgaat ggctcaatgc cgaaggcggc ctgcgcgcgt
      721 gggacatctc gcgcgatgcg ccgtacttcg gtttccagat tcccggccag ccgggcaagt
      781 acttctacgt ctggctggac gcgccgatcg gctacctgtc cagcttccag accctgtgcg
      841 gcaagctcgg cgaagacttc gaatcgcacc tgcgtgccgg caccagcacc gagctgcacc
      901 acttcatcgg caaggacatc gtcaacttcc acggcctgtt ctggccggcg gtgctgcacg
      961 gtaccggcca tcgcgcgccg acccgcctgc acgtcaacgg ctacctgacc gtggacggcg
     1021 ccaagatgag caagtcgcgc ggcaccttcg taatggcccg cactttcctc gacgctggcc
     1081 tggaaccgga agcgctgcgt tactactacg cggccaagtc cggcggtggc gtcgacgatc
     1141 tcgacctgaa cctgggtgac ttcattgccc gcgtcaatgc cgacctggtc ggcaagttcg
     1201 tcaacctggc cagccgctgc gccggcttca tcagcaagcg cttcgacggc cagctggccg
     1261 cgcagctgcc cgatgcggcg cagtaccagc gtttcgtcga tggcctggcg ccgatccgcg
     1321 aagcgtacga gcgcaacgac ccggctgcgg cgatccgcct gaccatgacc ctggccgacg
     1381 aagccaaccg ctacatcgac gacgtcaagc cgtgggtgat cgccaagcag gaaggcgccg
     1441 acgcgcagct gcaggcggtc tgcagccagg gcctgaacct gttccgcgtg ctggtcaccg
     1501 cactgaagcc ggtgctgccg gccaccgccg cgcaggccga ggccttcctg gctgcgccgg
     1561 tgaacgactg gaccgacctg gtgcagccgc tgctgggcca ccgcatcacc gactacaccc
     1621 cgctgttcac ccgtatcgac ccgaagaaga ttgacgccat gatcgacgcc tccaaggaca
     1681 ccctgcagcc ggccgccgct gctgcccccg ccgccaaggc cgacgccgcc aaaccggccg
     1741 caccggcacc ggcgccggcc aaggacgaag cgaacagcgc cgacgcgccg gcctacatcg
     1801 gcatcgatga tttcgccaag ctcgacctgc gcatcggcaa ggtgctggtg tgcgaattcg
     1861 tggaaggctc ggacaagctg ctgcgctttg aactggatgc cggcgagctg ggcaagcgcc
     1921 agatcttctc cggcatccgc ggcagctacg gtgagccgga aaagctggtg ggccgcagcg
     1981 tggtgtttat cgccaacctg gccccgcgca agatgcgctt cggcctgagc gaaggcatga
     2041 tcctgtcggc cggcttcgac ggcggcgcgc tggcgctgct ggacgccgac agcggcgcac
     2101 agccgggcat gccggtccgc tgatgcctca agcgggcgtg gccacggccg cgcccgccgg
     2161 cagcaccggc cacgggggca acgcgatggg aggcaacgga atggaactgg cgctgttcga
     2221 cttcgaccac accgtgacca cctgcgatac ctatggccgt ttcctgcgcc gcgtggccac
     2281 ggccgaacag ctggcgcagg cgtggtggaa agtcggcccg tggctggtgg cgtacaagct
     2341 gaagctgatc tcggccgaac gcatccgtgc acgcgtcacc cgcctgacct tcagcgaccg
     2401 ccacagcgat gacatcacca cgctggccgc cggcttctcg cgcgaattcc tgcccgaggt
     2461 ggtgcgcccg gaaatgctgg agcagatccg ctggcacaag gaacagcagc acaccgtggt
     2521 gatcgtgtcc ggttcgctgg acctgtacct gaagccatgg tgcgagcagc tgggcctgca
     2581 gttgatctgc aaccggctgg agagccagga cggccgcctg accggtcgct atgccggtgg
     2641 cgactgcggc ccgcgcaagg tcgagcacat ccgtcgccag ttcgatctgt cgcgctacgt
     2701 gcgcatccat gcctacggcg acagttccga agacaagccg atgctggcac tggcccacga
     2761 gcgctggttc cgtggcaaac ccctgaagta acccaacgcg cagccttcgc cacgcatgag
     2821 cctgaccccg cccctgaccg aacgcctcga ccgactgctg ccgcagaccc aatgcgggca
     2881 atgcggttac gacggctgcc gcccctacgc gcaggcgatg gcgcgcggcg aggcgggcgt
     2941 ggaccgctgc ccaccgggtg gcgacgccgg tgcgcgtgca ctggcccagg tgctgggcac
     3001 accggccatt ccgtttgacc gctcgcgcgg cgagcacaag gccgcgcagg ttgcgttgat
     3061 cgtggaggcc gactgcatcg gctgcaccaa atgcatccag gcctgcccgg tggatgccat
     3121 cgtcggcggt gccaagtaca tgcacacggt catcgccgat ctgtgcaccg gctgtgagct
     3181 gtgcattccg ccgtgcccgg tggactgcat cgagatgctg cccctgtaac ggggtcttca
     3241 gaagggggca gatccctatt ccagcgggaa agggatctga ccccgtttaa tgattacggc
     3301 accgctgccg tcaccacgat ctcgaccttc cactcggcgt gggccagctt ggcttcgaac
     3361 gttgcgcggg ccggggtcgc gccctcgacc acccactcgt cccacgcctt gttcatgccg
     3421 tcgaagtcgg cgatgtcggc caggaacact tccgcgcgca gcacgtgctg gcgatcgctg
     3481 gccaccagcg ccagcagctt gtcgatctcc gccagcacct gccgggtctg gccggtgatg
     3541 tcctggctgg tgtcttccgg aatctggccg gagaggtagg cgaccttgtt gtacacggtc
     3601 atttcggaca tgcgcggtcc gacgtcgtaa cgctccatca tgggcgtggc tcctgcgggt
     3661 gatcaggcct gcattgtcct ccaaagcggt caacgatggg tgcacgcggg cgtgccgcgc
     3721 aacgccacta ccgcgctccg acacgcccgc tggtcaaatg cccgcgacag gcgcacgatg
     3781 cgccacgccc gcgttgacac cgccctcgcc ctccctgacg cacccttgcg ccgatgaccg
     3841 aaaccaccga ccccgccacc gcttcctcca ccccggcatg gaagcgggtc cttaccatcg
     3901 tcgtcccgct gctgatcctc gcgttggccc tgcatgggct ggccaacgag ttcgatgaga
     3961 acggctaccg cgccatccgc cacgccttcc atcaactcag cggcacgcag atcgcgctta
     4021 ccgtcgtgct tggcctggcc agctacgcct gcctgatcgg ctttgacgcc atcggcctgc
     4081 gccgcagcgg catccgcgtg catccggcac gcatcggcat caccgcattc ctggcacata
     4141 cgctgggcca gaccgtgggc ttcgccgcgc tgaccggtgg tgcggtgcgc ctgcgcggtt
     4201 accgcaccgc cggcctggac ctggcgcaga tcggccaggt ggtgctgatg agcacgctcg
     4261 gcttcgtgtt cggtgcctgg ctgctgatca gcgtggcgct gtgcatggag cctgaagccg
     4321 cggcgctggc actgccgctg aatccggacg cggtgcgcgt ggtcggcatc atcgcgctgt
     4381 tcgcctatct ggcgatgctg ctgctggtcg gccgcgaagg ccgccagttc agcgtgttcg
     4441 ggcatggcct gtggctgccc gaccgccgca ccatgatcgg cgtcaccgtg ctcagcgtga
     4501 tcgaactggt actggccagc gccgcgttct acgtgctgct gccggactcg acgcccaccg
     4561 gcctgcccgg cttcgtcggc ctgtacctgg tcgcggtgct ggccggcctg gtctccaccg
     4621 tccccgcagg cctcggcgtg ttcgaatgga gcctgctgaa gctgctgccg caggttgcac
     4681 cggcggcggt gctggccgcc gcgctgatct accgcgttac ctactacgtg ctgccgttgg
     4741 tgctggccac cctgctcgca ttggcccctg ccctgcggca accgctgcag gccagcgctg
     4801 gcgccacccg caccggctgg aacgcactgc gcccctggtt gccacagatc atcgcgctgg
     4861 cggtgttcag catcggtgcc gcgctggtca tcgacggcac actgcccacg ccacgccggc
     4921 atctggtcaa tgcctcgctg ccggtcctgg aaacctcgca cctgatcggc agcctcagcg
     4981 gtgtcgcgct gctgctgatc ggccagggct tggcccggcg cagccatgcg gcgtggatgc
     5041 tggcgatggc ggtgtgcgtg gtcaccccgt tgccgctgtg gctgcgcggc ggccaatggt
     5101 tgatcgcagt ttccgcagtg ctggcggcga tggccctgtg ggccgcgcgc cgcgagttct
     5161 accgccaggg tgcgctgctg gacgaggcct ggtcgtggcc atggctgcgc aacctcgggc
     5221 tggtgctggt cgcggtcacc tggctgctgt tcttcactta cagccacgtc gaataccaga
     5281 acgagctgtg gtgggaattc gcggtgtccg gcaacgcgcc gcgtgcgctg cgtgcgctgc
     5341 tggtggtggc catcgcgctg gtgatgttcg gcctggcgcg attgctgcac agcacccgca
     5401 gcccgctgcc ggccgccgat gaagccacgc tgcaatcgct ggcgcctgtg ctggccggtg
     5461 ccaccgatac ccaggcctgc ctggtgctga ccgccgacaa ggcggtgctg cgcgatgatg
     5521 cgaagcaggg cttcgtgatg atgcagcgct atggcggttc gctgatcgcg atgggcgatc
     5581 cggtcggacc gccggaggtc gcccgcgcac tgatctggcg cttccgcgag gaggccgacc
     5641 gactcggcct gcgcccggtg ttctaccagg tgggcgagac ctactggcag acctacctgg
     5701 accttggact gggcctggtc aagctgggcg aggaagcgat ggtgccgctg cacgacttcg
     5761 gcctggaagg ccgcgaacgt gccgacctgc gccaggcctg gaaccgcggc aagcgcagcg
     5821 gcctgtcatt ccgggtggca cccgtggaag agattcccag cctgctgcca cgcctgcatg
     5881 ccatctccaa cgcctggctg gacgacaagg ccggcgatga aaagggcttc tcgctgggca
     5941 gctacgaccc ggattacctg gcgcgcttcc cggtcgcact ggtcgaggcc gaaggccaga
     6001 tcgtggcatt cgccaacctg tggcaggcac cggccggcgc cgagctgtcg gtggacctga
     6061 tgcgccatgt caacgaggcg cccaagggca cgatggactt cctcttcatc gaactgttcc
     6121 tgtggggccg tgcgcagggc tacgcgcgct tctcgctggg catggcgccg ctgtccggat
     6181 tggcccagca tcggctcgcg ggccgctgga accggctggc cggcctgctg gcgcggcacg
     6241 gtgaacgctt ctatggcttc agtggcctgc gccgcttcaa gtcgaagttc gatccacagt
     6301 ggcggccgcg ctatctggca gcacccggcg gcatgcacct gccggcggcg ctgctggatg
     6361 ccacgcgcct gatctcgctg gatccgcggc ggaattgagg ccgcgatccg tcgagcatgg
     6421 ctcgacgcta ctgcggcgcg ttctggtggg tgcgaaccgt tggttcgcac gccctccgct
     6481 ttacgcgccg cccttcgcaa cccc
//
LOCUS       DAOKIP010000218         6493 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.219,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000218 DAOKIP010000000
VERSION     DAOKIP010000218.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 6493)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6493)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6493
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.219"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            91..1602
                     /gene="lysS"
                     /locus_tag="QEL58_003447"
     CDS             91..1602
                     /gene="lysS"
                     /locus_tag="QEL58_003447"
                     /EC_number="6.1.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine--tRNA ligase"
                     /protein_id="HDS1677881.1"
                     /translation="MSEATDTPPVDENKLIAERREKLKALRGQGIAYPNDFRREDFAG
                     RLQEEFADAEQWTAEALEGNGRQVKMAGRLMAKRIMGKASFAQIQDESGRIQLFLQGT
                     VLGDAYTAFKGWDVGDIIAVEGGLTRTKTGELSVKAESIRLLTKSLRPLPDKWHGLAD
                     VEQRYRQRYVDLIVTPESRAVFIKRSKIIRAMRAWLDNRDFLEVETPMMHYIPGGAAA
                     KPFTTHHNALDLDLYLRVAPELYLKRLTVGGLERVYEINRNFRNEGVSTRHNPEFTMM
                     ELYEAYATYNEIMDLTEGVIRDVASAVNGTTEVEWDGAKIDLGPAFRRWRMDEAVRHH
                     NPEISAADCTDREALLRHCERLKIKVKPSYGWGKLLLEIFEATVEHTLIQPTFITDHP
                     VEVSPLARANDNDPGYTDRFELFVNGKELANGFSELNDPEDQAQRFQAQVAAKEGGDD
                     EAMHYDADYIRALEYGMAPTGGLGIGVDRLVMLLTGSSSIRDVLLFPYMRPEQ"
     gene            1808..2947
                     /locus_tag="QEL58_003448"
     CDS             1808..2947
                     /locus_tag="QEL58_003448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator"
                     /protein_id="HDS1677882.1"
                     /translation="MQGASVRSGRVSSPADDPAWSRSQAEYALNIVIVDDQTSARTML
                     RHVIEDIAPELSVYDFGDPLTALAWCEAHPVDLLLLDYRMPEMDGLEFARRFRRLPKH
                     RDIPVILITVVGDEPIRQAALEAGVIDFLVKPIRPRELRARCYNLLQLRQQTENVKQR
                     ALSLEQRLLASMHEVEERERETLSRLARAIEFRDAGTSAYLERMARVAGLIAEQLGLP
                     EDDVKLIEMAAPLHDMGKIAIPDAVLLKQGKLNDEELAIMRRHPRIGHELLSGSQNRF
                     IQVGALIALRHHERYDGSGYPDGLVGEAIPLEARIVAVADVFDALISPRPYKEAWTME
                     ATLAYLYAQRGRLFDPRCVDALMRGHSQLMDICAQHSTASTRPGG"
     gene            2949..3473
                     /locus_tag="QEL58_003449"
                     /pseudo
     CDS             2949..3473
                     /locus_tag="QEL58_003449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037070.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hybrid sensor histidine kinase/response
                     regulator"
     gene            3492..5672
                     /locus_tag="QEL58_003450"
     CDS             3492..5672
                     /locus_tag="QEL58_003450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008571489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HDS1677883.1"
                     /translation="MDTTPAAATVSRSLLARFRQRLSGREDSEHAQNLIRIVITALFI
                     SYLGWRSLSGGGEALTATWLILAFELTISAGLLAAILVHPGVSHVRRVIGMLTDYTCM
                     AWIMTIQGEPAAPLYAVMLWVTIGNGMRYGSTYLRVATAMGCLAFLCTVMLSPYWRGH
                     DYLGWGLLLGLGAIPLYFDSLLHALTRAVAEARQANEAKSRFLANMSHEFRTPLNGLA
                     GMTEVLATTRLDDEQRECLNTIQASTRSLLALVEEVLDISAIEAGKVRVEWHEFALAD
                     VLQAINLILTPQTRSKSLDYRVQVDENVPPRLLGDAGHLQQILLNLMGNAVKFTDSGY
                     VQLHVSSPDALGSERVRLRFEIVDSGIGVPVALRGRLFNAFEQGDVGLARRHEGTGLG
                     TAIAKGLVESMGGQVGYAPNSPRGSVFWVEITLDVADPVAAPVAASEVAEAGNVIAFS
                     NPFLRHRARVRSLRVLVADDHEANRMVLQRLLEKAGHKVTCVNGGAEVLDALEQASYD
                     AAIVDLHMPGMSGLDLLKQLRVMQASGMPYVPVMVLSADVTPESILRCEQAGARAFLA
                     KPVVATRLLEVLADVAANTRAETGIQSVPALPVGDGVLDTAVLDELAALGMGDGFERK
                     FIDQCLADVDASMGQLQACGERQAWEDFREHAHALRGVASNLGLVQVAASSGEIMRMA
                     DWQLKGEWNTRLGNLSAALRNGRNALAARSAGAPHRDDSERSPS"
     gene            complement(5685..6488)
                     /locus_tag="QEL58_003451"
     CDS             complement(5685..6488)
                     /locus_tag="QEL58_003451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010367081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="crotonase/enoyl-CoA hydratase family protein"
                     /protein_id="HDS1677884.1"
                     /translation="MERNVYWIHMHANLVNQPGRPCFASRLVDDIVDYQRELGDRLSA
                     SHVLSPHVVLASDSDVFNLGGDLELFCRLIREGDRARLLDYAQRCVRGVHAFHAGLGA
                     RAHSIALVQGNALGGGFEAALSCHTIVAEEGVLMGLPEVLFDLFPGMGAYSFLCQRIS
                     PRLAEKIMLEGNLYTARQLKEMGLVDIVVPVGEGVAAVEQVIKDSKRIPHAWAAMREV
                     NEIATMVPLHEMMRITEIWVDTAMQLGEKSLRTMDRLVRAQARRNGDPA"
BASE COUNT         1094 a         2093 c         2190 g         1116 t
ORIGIN      
        1 caggggccgg ggcagggcgg ttttggtatg ctgtggaacc ggctgtgccg ggcgcagcat
       61 cccccctcac tacacgattc ccgcagatcc atgagcgaag ctaccgatac cccccccgtc
      121 gacgaaaaca agttgatcgc cgagcgccgt gagaaactca aagcgctgcg tgggcagggc
      181 atcgcgtacc cgaacgactt ccgtcgcgag gactttgccg gacggctgca ggaagaattc
      241 gccgatgccg aacagtggac cgccgaggcc ctggaaggca acggccgcca ggtgaagatg
      301 gcgggccgtc tgatggccaa gcggatcatg ggcaaggcca gcttcgcgca gatccaggac
      361 gaatccggcc gcatccagct gttcctgcag ggcaccgtgc tcggcgatgc ctacacggcc
      421 ttcaagggct gggacgtggg tgacatcatc gcggtcgaag gcggtctgac ccgtaccaag
      481 accggcgagc tgtcggtcaa ggccgaatcg atccgcctgc tgaccaagtc gctgcgcccg
      541 ctgccggaca agtggcacgg cctggccgac gtcgagcagc gttatcgcca gcgctacgtc
      601 gacctgatcg tgaccccgga gtcgcgcgca gtcttcatca agcgctctaa gatcatccgc
      661 gccatgcgcg cgtggctcga caaccgcgac ttcctggaag tcgagacgcc gatgatgcat
      721 tacatccccg gcggcgcggc ggccaagccg ttcaccaccc accacaacgc gctggacctg
      781 gacctgtacc tgcgcgtggc gccggagctg tacctcaagc gcctgaccgt gggtggcctg
      841 gagcgcgtgt acgagatcaa ccgcaacttc cgcaacgaag gtgtcagcac ccggcacaac
      901 ccggagttca ccatgatgga gctgtacgag gcctatgcca cgtacaacga gatcatggac
      961 ctgaccgagg gcgtgatccg tgacgtcgcc agcgctgtca acggcaccac cgaagtggag
     1021 tgggacggcg cgaagatcga cctgggcccg gcgttccgcc gctggcgcat ggacgaagcc
     1081 gtgcgccacc acaacccgga gatctccgcc gccgactgca ccgatcgtga ggcgctgctg
     1141 cgccattgcg agcgcctgaa gatcaaggtc aagccgtcct acggctgggg caagctgctg
     1201 ctggagatct tcgaagccac cgtcgagcac accctgatcc agccgacctt catcaccgat
     1261 catccggtcg aggtctcgcc gctggcccgt gccaacgaca acgatccggg ctacaccgac
     1321 cgcttcgagc tgttcgtcaa tggcaaggag ctggccaatg gcttctcgga attgaatgat
     1381 ccggaagacc aggcccagcg cttccaggcc caggtggccg cgaaggaagg tggcgacgac
     1441 gaggcgatgc attacgacgc cgactacatc cgtgcgctgg agtacggcat ggccccgacc
     1501 ggcggcctcg gcatcggcgt cgatcgcctg gtgatgctgc tgaccggcag cagttcgatt
     1561 cgtgacgtgc tgctgttccc gtacatgcgt ccggagcagt aagccgtctt tctgactcct
     1621 gattgtgcgc gccgtcgcga aacgagacgg cgcgattgac gcgtcccgca ctcggcgtat
     1681 cgttaatgca ctaccttgac gcctgttatg gcttgatcgg cgccaggggg atggtgcatt
     1741 gtggagcgtc cgcttcacaa tgtgatgacg atcatgaacc gggacgtatg acacgggagt
     1801 caggccgatg cagggtgcga gcgttcgcag cggcagagta tcctcgcctg ctgatgatcc
     1861 agcatggtcg agaagccagg cagagtacgc gttgaacatc gtcattgttg atgatcagac
     1921 gtccgcgcgg acgatgctgc gtcatgtcat cgaggacatc gcgccggaac tgagcgtgta
     1981 tgactttggt gacccgctga ccgcgttggc ctggtgcgag gcgcatccgg tcgacctgct
     2041 gctgctcgat taccgcatgc cggagatgga cgggctggag ttcgcccgcc gtttccgccg
     2101 cctgcccaag caccgcgata ttcccgtgat cctgatcacc gtggttggcg acgagccgat
     2161 ccggcaggcg gcgctggaag cgggtgtcat cgatttcctg gtcaagccga tccgcccgcg
     2221 cgaactgcgc gcgcgctgct acaacctgtt gcagctgcgc cagcagaccg agaacgtgaa
     2281 acagcgtgcg ttgtcgctgg aacagcggct gctggccagc atgcacgagg tcgaggaacg
     2341 cgaacgcgaa accctgtcgc gattggcccg tgcgatcgag ttccgtgatg ccggcaccag
     2401 tgcctatctg gaacgcatgg cgcgggtcgc cggactgatc gccgagcagc tcggcctgcc
     2461 cgaggatgac gtcaagctga tcgagatggc ggcgccgctg catgacatgg gcaagatcgc
     2521 gattcccgat gccgtgctgc tcaagcaggg caaactcaac gacgaggagc tggcgatcat
     2581 gcgccggcac cccaggatcg gccatgaact gctcagtggc agccagaacc gcttcatcca
     2641 ggtcggcgca ttgatcgcac tgcgccatca cgagcgctat gacggcagcg gttacccgga
     2701 cggcctggtg ggcgaggcca ttcccctcga ggcgcggatc gtggccgtgg ccgacgtgtt
     2761 cgacgccctg atttcgcccc gtccgtacaa ggaagcatgg accatggaag ccacgctggc
     2821 ctatctgtat gcccagcgtg gccggttgtt cgacccgcgc tgcgtggatg cgctgatgcg
     2881 cggccactcg cagctgatgg atatctgcgc ccagcactcg acggcatcga cgcgaccggg
     2941 tgggtgacat gcaggacctg ctcgcacgcg tgaggcgcaa gctggcgcag cgtccggatt
     3001 cggagcatgg ccaggcgatc gtgcggatgg tgctgatctc gctgatcctg gtctatgttc
     3061 tgttgtcggg cgcccgcctg catcggctcg agcagtacca gggcgtgctg gcgacggtgt
     3121 tgaccgggct cggcctgtcg ctgctgctgt tcggctggct gctgtggaag ccgggccgct
     3181 cggacccgcg acgggtggcc gggatgctgg ccgactacgg gttgatcgcg atcggcatga
     3241 tccagatggg cgagccgctg gcctgggtgt atgccgtggt gatgtgggtg acggtcggca
     3301 atgggctgcg cttcggtccc cgctacctgg ccgctgccat cgcgttggca atggccagtt
     3361 tcggtgccac cgtgctgttg accccgtact ggcgggccaa ccctggcctg gccctttccc
     3421 tgtggctggg gctgctggcg gtgcccctgt gctgctcttc cctgctgcgc cgaaggatgc
     3481 gacatccgac catggatacc acccccgccg ccgccaccgt ctcgcgttcg ctgctggccc
     3541 gcttcaggca gcgcctgtcc gggcgcgaag acagcgagca cgcgcagaac ctgatccgca
     3601 tcgtcatcac tgcactgttc atcagctacc tgggctggcg ctcgctcagc ggcggcggtg
     3661 aggcactgac ggccacctgg ctgatcctgg ccttcgaact gaccatctcc gccggcctgc
     3721 tggcggcgat cctggtgcat ccgggcgtgt cgcatgtgcg ccgggtgatc ggcatgctga
     3781 ccgactacac ctgcatggcc tggatcatga ccatccaggg cgagccggcg gcaccgttgt
     3841 acgcggtgat gctgtgggtg acgatcggca acggcatgcg ctacggcagt acctatctgc
     3901 gcgtggccac cgcgatgggc tgcttggcct tcctgtgcac ggtgatgctg tcgccgtact
     3961 ggcggggcca cgactatctg ggctggggcc tgctgctggg cctgggcgcg atcccgctgt
     4021 acttcgactc gttgctgcac gcactgaccc gcgccgtggc cgaagcacgc caggccaacg
     4081 aggccaagag ccgcttcctg gccaacatga gccacgagtt ccgtacaccg ctgaacggcc
     4141 tggccggcat gaccgaagtg ctggccacca cccgcctgga cgatgagcag cgcgaatgcc
     4201 tgaacaccat ccaggcctcg acccgcagcc tgttggcgct ggtggaggag gtgctggaca
     4261 tctccgcgat cgaggcgggc aaggtgcggg tggagtggca cgaattcgcg ctggccgatg
     4321 tgctgcaggc gatcaacctg atcctgaccc cgcagacccg ctcgaaatcg ctggactacc
     4381 gcgtgcaggt ggacgagaac gtgccgccgc gcctgctggg cgacgccggc catctgcagc
     4441 agattctgct gaacctgatg ggcaacgcgg tcaagttcac cgacagcggc tacgtgcaat
     4501 tgcacgtgtc cagccctgat gcgctgggca gcgagcgggt acgcctgcgc ttcgagatcg
     4561 tcgacagcgg catcggtgtg ccggtggcgc tgcgcggccg cctgttcaat gcattcgagc
     4621 agggcgatgt cggcctggcc cgccgccatg agggcaccgg cctgggtacg gccattgcca
     4681 agggcctggt ggagtcgatg ggcggccagg tcggttacgc cccgaacagc ccgcgcggca
     4741 gcgtgttctg ggttgaaatc acgctggatg ttgcagatcc cgtggcggcg ccggtggcgg
     4801 cgtccgaggt ggccgaagcc ggcaacgtca ttgcgttctc caatccgttc ctgcgccatc
     4861 gggcacgggt gcgcagcctg cgggtgctgg tggccgatga ccatgaggcc aaccggatgg
     4921 tgctgcagcg cctgctcgag aaagccggcc acaaggtcac ctgcgtcaat ggtggcgccg
     4981 aagtgctcga cgcgcttgag caggcaagct acgacgcggc gatcgtcgac ctgcacatgc
     5041 ccggcatgag cggcctggac ctgctcaagc agctgcgggt gatgcaggcc agtggcatgc
     5101 cctatgtgcc ggtgatggtg ctcagtgccg atgtcacccc cgagtcgatc ctgcgctgcg
     5161 aacaggcggg cgcgcgcgcg ttcctggcca agccggtggt cgccacccgg ctgctggaag
     5221 tactggccga cgttgcggcc aatacccgtg ccgaaaccgg catccagtcg gtgcccgcct
     5281 tgccggtcgg cgatggcgtg ctcgacaccg ccgtgctgga cgagctggcc gcgctgggca
     5341 tgggcgatgg cttcgaacgc aagttcatcg accagtgcct ggcggatgtc gacgccagca
     5401 tgggccagct gcaggcctgc ggtgagcgcc aggcctggga agacttccgc gagcatgccc
     5461 acgctttgcg gggtgtggcg agcaacctgg gactggtcca ggttgccgcc tccagtggcg
     5521 agatcatgcg catggcggac tggcagctga agggcgagtg gaacacccgg ctcggcaacc
     5581 tgtcggccgc cctgcgcaac ggcaggaatg cgctggctgc gcgtagtgcg ggggcaccgc
     5641 accgcgacga cagtgagcgc agcccgtcct gaaccgccgg gctgtcaggc cgggtcgcca
     5701 ttgcgccggg cctgcgcccg caccagccga tccatcgtac gcagggactt ctcgccaagc
     5761 tgcatggcgg tgtcgaccca gatctcggtg atccgcatca tttcgtgcag cggcaccatg
     5821 gtggcgatct cgttgacttc acgcatcgcc gcccaggcgt gcggaatccg cttgctgtcc
     5881 ttgatcacct gttctactgc ggcgacgcct tctccgaccg gcacgacgat gtccaccagg
     5941 cccatctcct tgagctggcg ggccgtgtag agattgccct ccagcatgat cttctcggcc
     6001 aggcgcgggc tgatccgctg gcacaggaag gagtaggcgc ccatgccggg gaacaggtcg
     6061 aacagcacct ccggcaggcc catcagtacg ccttcctcgg caacgatggt gtggcagctc
     6121 agcgccgctt cgaagccgcc gccgagtgca ttgccctgga ccagtgcgat gctgtgcgcg
     6181 cgggcgccaa gaccggcatg gaaggcatgc acgccgcgca cgcagcgctg cgcgtagtca
     6241 agcaggcggg cgcgatcccc ttcgcggatc aggcggcaga acagttcgag atcgccgccc
     6301 aggttgaaca cgtcgctgtc cgaggccaga acgacatggg gtgacagaac atgcgaggcg
     6361 ctgaggcgat cgcccagttc gcgctggtag tcgacgatgt catcgaccag gcgcgaagcg
     6421 aagcatggcc ggcccggctg gttgaccagg ttggcgtgca tgtggatcca gtagacattc
     6481 cgctccagtt cct
//
LOCUS       DAOKIP010000219         6443 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.220,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000219 DAOKIP010000000
VERSION     DAOKIP010000219.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 6443)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6443)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6443
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.220"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(7..402)
                     /locus_tag="QEL58_003452"
     CDS             complement(7..402)
                     /locus_tag="QEL58_003452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006373284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4440 domain-containing protein"
                     /protein_id="HDS1677885.1"
                     /translation="MDTTAEHEIHHLHDKLQAWFRAEVGIDALDDLMAHFCADFSMVG
                     IAGRRLDRIAVQALFAGGHGARPGLQISIDAVQAVEAPSPLAVLRYREGHAIDGGEPA
                     WRESLAVLRQEQEQEQGRWCWLALHEVAA"
     gene            complement(405..1760)
                     /locus_tag="QEL58_003453"
     CDS             complement(405..1760)
                     /locus_tag="QEL58_003453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDS1677886.1"
                     /translation="MPSPRLRHEAIFLLVFALDLVNMFIATVAYPALAAELHADVGTL
                     AWVGTAYMLGLSVVIPLAPWLAARCGERRLLLVALLLFAIAAALAGAAPGIGWLLGWR
                     LLQGLAGGLLIPVAQAAAYRQCTPDQRGALTRRILLVALLVPALAPALGGLLVQWLSW
                     RGVLWASLPLALMAIGLVLAWMPADVRRTVPRLQAHALTTAMAALGALLLALTWLGEP
                     GHRLAGSGLLMVAVVLAVVHLRHARRQPQPLLRWSLLSHRSLRLAMLVYLAVPGVFIG
                     SQLVSTLQLHQAGYSAARIGALMLPWALASAIAITASKRLLARFGPAAVLRAGMFLQA
                     SGLLAMALLPQPAFALAGLLFALMGAGGSLCSSTAQTLAFHGVEGEALGDASALWNLN
                     RQLSFCLGTAAIALLLALAMQWLPARATGVALGLAAVLTLLPMLLLRRPKQLLLPHPG
                     N"
     gene            1866..2762
                     /locus_tag="QEL58_003454"
     CDS             1866..2762
                     /locus_tag="QEL58_003454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008267144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDS1677887.1"
                     /translation="MVSLDRFDIFRAVVEAGSLTAAADRLGLSRAVVSFNLKRLEQEL
                     GVTLLLRSTRHLALTEAGEQFLQHCVQALDAAQAAIDAARRDQHQLQGVLRLTTTPEY
                     AQLRLIPALEAFRARHPALQLHLSTSPAPADLIPERFDLAIRLGRLPDSGLHASELEQ
                     HPLCAVAAPSLLARLPSADAADDPVQLGTLPRLGYPRLADVPVIAPDGSDALFATNPA
                     NAVVRVDGASSLRAFAVAGAGVTVLPHWLIEDDLAMNRLRPVLRLHRFPQQSVYAVYP
                     HSAQPSPKVRQLIDFLRDWFTA"
     gene            complement(2866..5661)
                     /locus_tag="QEL58_003455"
     CDS             complement(2866..5661)
                     /locus_tag="QEL58_003455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005413781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 3 C-terminal
                     domain-containing protein"
                     /protein_id="HDS1677888.1"
                     /translation="MKTFTKPLALSLALSTALAAPAWADPAAFTVLTLEQAPGAEAMP
                     ALAAQLKSLKVDAVSVRQVQRGIGQVDPLQVLADGLGYEYRFIAAGKDDGQTQRGQAV
                     LTRLPIAAESGPDQPGLNYLRLDDGRHTVAVYTDAGAGAAQLPALVTRSRLGAPAVLL
                     GAVAGESATAAGFDPARVALEADASYFSDGFQAASSAPFKVEGSSLRATLLTLAYAAD
                     THGDTPWMDTTLNADARAALLLKAMTEDEKFQMLHSYFGLGKDGGPLPEGAVGSAGFV
                     PAVPRLGIPSQQSADAGVGVTNPGGIRPGDFATAMPSGPSTASSWNREVAFAGGATMG
                     REAWQQRFNILLSGSVNLQRDPRNGRNFEYAGEDPLLAGSMVGALIQGVQSQHVISSM
                     KHFALNDMETRRNFHDVRIGEQAMHESDLLAFEIALEAGRPGVAMCSYNKINGTYGCE
                     NGYLMNQVLKQEWKFPGFVMSDWGGVHSGSKAALAGLDQQSAGEVFDAAVFFDEPLRL
                     AVHGGVVPQARLNDMVARILRTMFLHGNFDNPPQHQKVDAEAGFAVAQRTVEEGSVLL
                     RNEGNLLPLADSVKRIVIIGGHADKGVIGGGGSSMVGVTAKGTNAVPGVLPTTWPGPV
                     IFHPSSPLESLRAARPDATIEYVDGSNAAAAAKAAAQADVAIVFATQWAAESVDLPDM
                     QLPDNQDALISAVAKANPKTVLVLETNGPVRTPWLAQVPAMLQAWYPGIRGGEGIAAL
                     LTGQVNPSGRLPVTWVVDESQLPRPHIDGLGFKPAKPFGDVFDFDIEGANVGYKWMAA
                     KGLTPTFAFGHGLSYTSFAYENLKVSVEGSRLVASVDIRNTGKRAGADVAQLYLKLPA
                     GSTTPIRLIGYDKVNLQPGEQRRIRIEAEPKTLAHYDAQARQWKIDGGTYQVQLSRNA
                     AEPLQSVDVQLVEQVLR"
     gene            6000..6434
                     /locus_tag="QEL58_003456"
     CDS             6000..6434
                     /locus_tag="QEL58_003456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010485036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glyoxalase/bleomycin resistance/dioxygenase
                     family protein"
                     /protein_id="HDS1677889.1"
                     /translation="MNIHRDFDHLWRDRCDTSSQRSPRVLIRVFVAPGQLEQSVAFYE
                     QLQGVVADAGFPFPDAGLRLAMVGAFLLIEGCEEALAPFTSTTGTLLVDDVRPYHDRL
                     VAAGAEIIFPLQVVPTGAAFNAVHPDGTVVEYVHHRPDPHGR"
BASE COUNT         1082 a         2243 c         2122 g          996 t
ORIGIN      
        1 ttccaatcag gcggccacct catgcagcgc cagccagcac cagcgcccct gctcctgctc
       61 ctgctcctgc ctcagtaccg ccagcgactc ccgccatgcg ggctcgccgc catcgatcgc
      121 atgtccttcg cgatagcgca gcaccgccag cggtgatggc gcttccaccg cctgcacggc
      181 gtcgatggaa atctgcagcc ctggacgcgc gccatgaccg cccgcgaaca gtgcctgcac
      241 ggcaatccgg tccagcctgc gaccagcgat gccgaccatg ctgaagtctg cacagaaatg
      301 cgccatcaga tcatccagtg cgtcgatgcc gacctcggca cggaaccagg cctgcagttt
      361 gtcgtgcagg tggtggattt catgttctgc ggtggtatcc atcatcaatt cccagggtgt
      421 ggaagaagaa gctgcttcgg ccgacgcaac agcagcatcg gcagcagggt cagtacggcg
      481 gccagaccca gcgccacgcc agtggcgcgg gccggaagcc actgcatggc cagtgccagc
      541 agcagcgcga tggcggccgt gcccaggcag aagctgagct ggcggttgag gttccagagc
      601 gcactggcat cgcccagcgc ttcgccctcg accccatgga aggccagcgt ctgcgcggtg
      661 ctgctgcaca ggctgccgcc agcacccatc agcgcgaaca gcagcccggc cagcgcaaac
      721 gccggctgtg gcaacagcgc catcgccagc aggccactgg cctgcaggaa catgccggca
      781 cgcagcactg cggccgggcc gaagcgagcc agcaggcgct tgctggcggt gatcgcgatg
      841 gccgaggcca gcgcccacgg cagcatcagt gcgccgatgc gcgcggcgct gtaaccggcc
      901 tggtgcagtt gcagggtgct gaccagctgg ctgccgatga acacgcccgg caccgccaga
      961 tacaccagca tcgccaggcg caggctgcga tgggacagca gcgaccagcg cagcaggggc
     1021 tgcggctgcc gacgtgcatg ccgcaggtgg acgacggcga gcaccaccgc gaccatcagc
     1081 aacccgctgc cggcaagacg atgcccgggt tcgcccagcc aggtcaacgc cagcagcagc
     1141 gcgcccagcg ccgccatcgc ggtggtcagc gcatgggcct gcaggcgcgg cacagtacga
     1201 cggacgtcgg cgggcatcca cgccagcacc agtccaatcg ccatgagtgc cagaggcagg
     1261 ctggcccaga gcacaccgcg ccaggacagc cattgcacca gcagcccgcc cagcgctggc
     1321 gccagtgccg gcaccagcag cgccaccagc aggatgcgcc gggtcagtgc accgcgttgg
     1381 tcaggcgtgc actgccggta ggccgccgcc tgagccaccg gaatcagcag gccaccggcc
     1441 aggccctgca gcagccgcca ccccagcagc caaccgatgc ccggcgcggc tcccgccagc
     1501 gcagcggcga tcgcgaacag cagcagtgcc accagcagca ggcggcgctc gccacagcgt
     1561 gcggccagcc atggcgccaa cgggatcacc acgctcaggc ccagcatgta ggcagtgccg
     1621 acccaggcca gggtaccgac gtcggcatgc agctcggccg ccaatgccgg ataggccacc
     1681 gtggcaatga acatgttgac caggtccagg gcgaacacca acaggaagat cgcctcatgg
     1741 cgcaggcggg gggacggcat cgacggcgct ccagcaggga agcggccagc atgcccggca
     1801 ggcgttgttg gaaaaacacg acgacagctg caacactgtc aaatctgttt tgacaattga
     1861 tgtctatggt cagcctcgat cgcttcgaca tcttccgtgc tgtggtcgag gccggcagcc
     1921 tgaccgcggc ggccgaccgc ctcggcctga gccgcgcggt ggtcagcttc aacctgaagc
     1981 ggctggaaca ggagctgggc gtgaccctgc tgctgcgcag cacccgtcac ctggccctga
     2041 ccgaggccgg tgaacagttc ctgcagcact gcgtgcaggc actggatgct gcacaggcgg
     2101 cgatcgatgc cgcgcgccgc gaccagcacc aactgcaggg cgtactgcgc ctgaccacca
     2161 caccggagta cgcacagctg cgcctgatcc cggcactgga ggcgttccgc gcgcgccacc
     2221 cggccctgca actgcatctg tcgacctcgc cggcaccggc tgacctcatt cccgagcgtt
     2281 ttgatctggc gatccgtctt ggccgcctgc ccgactctgg cctgcatgcc agcgagctgg
     2341 aacagcaccc tctgtgtgcg gtggcggcgc cttcactgct ggcgcgcctg ccgtccgctg
     2401 atgccgcgga cgatccggtt cagctcggca cgctgccgcg cctgggctac ccacggctgg
     2461 ccgatgtacc ggtgatcgcg ccggacggaa gtgatgcgct gtttgccacc aatccggcca
     2521 atgcagtggt acgcgtggat ggcgccagca gcctgcgcgc cttcgccgtg gccggtgccg
     2581 gggtcaccgt tcttccccac tggctgatcg aggacgacct ggccatgaac cggctgcggc
     2641 cagtactgcg cctgcatcgt ttcccacagc aaagcgtgta cgcggtctat ccacacagtg
     2701 cacagccgtc gcccaaagtg cggcagctga tcgatttcct gcgcgactgg ttcactgcat
     2761 gaaaaaaggg gacggaggga attaagtcgt ttctgccata aacgacttaa ttccctccgt
     2821 cccctttttc agacacggcc cgttgcgggg ccgtgtcctc aggcatcagc gcagcacctg
     2881 ctcaaccagc tgtacgtcca cgctctgcaa cggctcggcg gcgttgcgcg acagctgcac
     2941 ctggtaggtg ccgccgtcga tcttccactg gcgcgcctgt gcatcgtaat gggccagggt
     3001 cttcggctcg gcctcgatgc ggatgcggcg ctgttcgccc ggctgcaggt tcaccttgtc
     3061 atagccgatc aggcggatcg gcgtggtgct gccggccggc agcttcaggt acagctgggc
     3121 gacgtcggca ccggcgcgct tgccggtgtt gcggatgtcg acgctggcga ccaggcgcga
     3181 gccttccacg ctcaccttca ggttttcata ggcgaaggag gtgtaggaca ggccgtggcc
     3241 gaaggcgaag gtcggggtca ggcccttggc cgccatccac ttgtaaccga cgttggcgcc
     3301 ttcgatatcg aaatcgaaca catcaccgaa cggcttggcc ggcttgaagc ccaggccgtc
     3361 gatgtgcggg cgcggcagct gcgattcgtc caccacccag gtcaccggca ggcggccgga
     3421 cggattgacc tggccggtca gcagcgcggc aatgccttcg ccaccgcgga tgcccggata
     3481 ccacgcctgc agcatcgccg gcacctgtgc cagccacggc gtgcgcaccg ggccgttggt
     3541 ttccagcacc agcacggtct tcgggttggc cttggccacg gccgagatca gggcgtcctg
     3601 gttgtcggga agctgcatgt ccggcaggtc caccgattct gccgcccact gggtggcgaa
     3661 cacgatggcg acgtcggcct gcgcggcagc cttggctgca gcggcggcat tgctgccgtc
     3721 cacatactcg atggttgcat ccggacgtgc agcgcgcagc gattccagcg gcgaggacgg
     3781 gtggaagatc accgggcccg gccaggtggt cggcagcacg cccggcaccg cattggtgcc
     3841 cttggcggtc acgcccacca tcgacgaacc gccgccaccg atcacgccct tgtcggcatg
     3901 gccgccgatg atcacgatgc gcttcacgct gtcggccagc ggcagcaggt tgccctcgtt
     3961 gcgcagcagc acgctgccct cttccaccgt gcgctgggcg acggcgaagc cagcctcggc
     4021 atccaccttc tggtgctgcg gcgggttgtc gaagttgccg tgcaggaaca tcgtgcgcag
     4081 gatgcgcgcc accatgtcgt tcaggcgcgc ctgcggcact acgccaccgt gcacggccag
     4141 gcgcagcggt tcgtcgaaga agacggctgc atcgaacact tcaccggccg actgctggtc
     4201 caggccggcc agcgccgcct tcgagccact gtgcacgcca ccccagtcgg acatcacgaa
     4261 accggggaac ttccattcct gcttcagcac ctggttcatc aggtaaccgt tctcgcagcc
     4321 gtaggtgcca ttgatcttgt tgtacgaaca catcgccacg cccgggcggc ctgcctccag
     4381 cgcgatctcg aaggcgagca ggtccgactc gtgcatggcc tgctcgccga tgcgcacgtc
     4441 gtggaagttg cggcgggtct ccatgtcgtt cagcgcgaag tgcttcatcg aggagatcac
     4501 gtgctggctc tgcacgccct ggatcagcgc accgaccatc gaaccggcca gcagcggatc
     4561 ttcaccggca tactcgaaat tgcggccgtt gcgcgggtcg cgctgcaggt tgacgctgcc
     4621 cgacagcagg atgttgaagc gctgctgcca ggcctcgcgg cccatggtcg cgccgccggc
     4681 aaaggccact tcgcggttcc agctggatgc agtggacggg cccgacggca tcgcggtggc
     4741 gaagtcgccc ggacggatgc cacccggatt ggtcacgccg acgccggcat cggccgactg
     4801 ctgcgaggga atgcccaggc gcggcaccgc cgggacgaag ccggccgaac cgaccgcgcc
     4861 ttccggcagc gggccaccgt ccttgcccag cccgaagtag ctgtgcagca tctggaactt
     4921 ctcatcctcg gtcatcgcct tcagcagcag cgcagcgcgc gcgtcggcgt tgagggtggt
     4981 gtccatccac ggcgtgtcgc catgcgtatc ggcggcatag gccagagtca gcagcgtggc
     5041 acgcaggctg ctgccttcca ccttgaacgg cgcgctgctg gcagcctgga agccatcact
     5101 gaagtagctg gcgtctgctt ccagtgcgac acgcgccgga tcgaagccgg ccgccgtggc
     5161 cgattcgcca gccacggcac cgagcaggac cgccggcgca cccagccgcg agcgcgtgac
     5221 cagcgccggc agctgtgccg cgcctgcacc ggcatcggta tagaccgcga cggtgtggcg
     5281 gccatcgtcc aggcgcaggt aattcagccc cggctggtcg gggccggact cagcggcgat
     5341 cggcagccgt gtcagcacgg cctggccgcg ctgggtctgg ccatcgtcct tgcctgcggc
     5401 aatgaagcgg tattcatagc ccaggccgtc ggccagcacc tgcagcggat cgacctggcc
     5461 gatgccgcgc tgcacctggc gcacgctcac cgcgtccacc ttcaggctct tcagctgcgc
     5521 agccagggcc ggcattgctt cggcgccggg cgcctgttcc agggtcaaca cggtgaacgc
     5581 cgcagggtcg gcccaggccg gggcggcgag cgcagtagac agggcgaggg agagggcaag
     5641 cggctttgta aacgttttca tcggcaggcg taattccgtt gccaaggcaa tcggtccagg
     5701 gaaagtgccg ccgaagggtg cagcgttcat gccgcgcagg ggttgccagg caacgtcccg
     5761 caggccgaag gacgggccgg tctgcgcgcg ggaccctcct cccggcgtga caacctgcct
     5821 gtccgggccg cgctgggcgg cccaatcatg tgaagattgt gcgagggcgt tcacacctgt
     5881 caacaggacc taagtcacag gggcaacctg gccgccggtt atcaggccat caccggcagt
     5941 catcagcagg ccgcacgggg ctgccgataa tggggcgtca ccggccctga accccgccca
     6001 tgaacataca ccgcgacttc gatcatctct ggcgcgaccg ctgtgatacc tcgagccaac
     6061 gcagcccacg cgtgttgatc cgggtgttcg tggccccggg ccagctggag cagagcgtgg
     6121 ctttctacga gcagttgcag ggcgtcgtgg ccgatgcggg cttcccgttt cccgatgccg
     6181 gcctgcgcct ggcgatggtc ggagccttcc tgctgatcga agggtgcgag gaagcgctgg
     6241 cccccttcac ttcgaccacc gggacgctgc tggtcgatga cgtccggcct tatcacgacc
     6301 gactggtcgc ggcgggggcc gaaatcatct tcccgctgca ggtggtgccg accggcgcgg
     6361 cgttcaatgc agtgcatccc gatggcacgg tggtcgagta cgtgcatcac cgccccgacc
     6421 cgcacgggcg ctgagggtac gca
//
LOCUS       DAOKIP010000220         6318 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.221,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000220 DAOKIP010000000
VERSION     DAOKIP010000220.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 6318)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6318)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6318
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.221"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(31..1002)
                     /gene="trxB"
                     /locus_tag="QEL58_003457"
     CDS             complement(31..1002)
                     /gene="trxB"
                     /locus_tag="QEL58_003457"
                     /EC_number="1.8.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014647087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-disulfide reductase"
                     /protein_id="HDS1677890.1"
                     /translation="MSTSLPSRHQRLVILGSGPAGWTAAVYAARANLKPVVITGLQQG
                     GQLMTTTEVDNWPGDAHGLMGPDLMARMQAHAERFETEVIFDHIHTADVSQRPFKLIG
                     DSHEYTCDALIIATGATAKYLGIPTEDEFKGRGVSACATCDGFFYRDQDVVVVGGGNT
                     AVEEALYLSNIARKVYLVHRRDTLKAEKIMQDKLFKKVAEGKIETVWHHQVEEVLGND
                     AGVTGVRVKSTLDGSTRDIDAHGFFVAIGHHPNTTLFDGQLAMNNGYLEIRSGLGGNA
                     TQTSVEGVFAAGDVADQHYRQAITSAGFGCMAALDAERYLDAQGKAS"
     gene            1236..3596
                     /locus_tag="QEL58_003458"
     CDS             1236..3596
                     /locus_tag="QEL58_003458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017172352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK 4TM domain-containing
                     protein"
                     /protein_id="HDS1677891.1"
                     /translation="MAKQVPERSKSDDSKASRRTAAAATTDNPRRQRLWRDLGLIAIA
                     PALLYLAASLFTYSATDPGWSHTGSVVAPVHNLGGRAGAWIADVLLQLFGYVAFLLPV
                     VLGALAWIAMFGLKRESKGENDLDPALRLVGLVGFLIAGTGFLHVRLFSGDVSSAGGI
                     LGKLVGNSLTVGFGALGANLFVLVLLLASITLATGLSWFTVMEKIGRGVMSLAPLLAR
                     KKEEVTEWQQTRVMREERQEVRKADAEVRAKREPVKIEPRPEPVIEKSDRAKRDTQIP
                     MFRGVNGDGSDLPPLALLDDPKPQPVGYDKETLDALSRQIEFKLKDFRIDAQVVGANP
                     GPVITRFEIEPAPGIKVSQISSLDKDIARGLSVKSVRVVDVIPGKSVIGLEIPNVTRE
                     MIYLSELLRSKEYDKSASVLTLALGKDIAGRSTVADLARMPHLLVAGTTGSGKSVAVN
                     AMVLSLLFKASPKDLRMLMIDPKMLELSVYQGIPHLLAPVVTDMKEAANGLRWCVAEM
                     ERRYKLMSAVGVRNLAGFNKKVKEAQDAGQPLMDPLFKPNPELGEAPRPLETLPFIVI
                     FIDEFADMMMIVGKKVEELIARLAQKARAAGIHLILATQRPSVDVITGLIKANIPTRI
                     AFQVSSKIDSRTILDQSGAETLLGHGDMLYLPPGTAMPERVHGAFVSDEEVHRVVEHL
                     KAMGPADYVDGVLDEVQTMGDGVVVGATGLPENSSAGDESDPLYDEALRVVTETRRAS
                     ISGVQRRLKIGYNRAARLIEAMEAAGVVSPPEHNGDRTVLAPPPPK"
     gene            3636..5579
                     /locus_tag="QEL58_003459"
     CDS             3636..5579
                     /locus_tag="QEL58_003459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005416488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3857 domain-containing protein"
                     /protein_id="HDS1677892.1"
                     /translation="MLHPVPSALALALAAFLAAGPALADTATSAPATAPPSTSGDTEA
                     SNNFSIVRYRADYQVRPDAGNVQTETYEVLLKTKASVEQFSQVRLSYSEKMETLEVLG
                     AYTITADGQRRAVPADRIYTQESYSSASAAMYADRKVRVIVFPNLAPGTRLYYQVRRT
                     QTTPYFPGYFGLWETFNVFTEYEDAEVTLSAPANLPMFVDSRGVQGSDRPTVKNGQAQ
                     WRWRYQRREAMPAQNWSAAGWEFGPNIMASTYRDWSQMGRAYQLKAGPAAQVTPELQA
                     LADQVTAGISDRREQADALYRWVAQNIRYVAVYLGNGGLEPNSAQSILDNHYGDCKDH
                     VTILEALLAAKGIASSPVLIGAGGGPTLPKIPVLGRFNHAITYIPEFDLYLDSTTAWA
                     RFGQLPEGDLGAPVMRTRDATLARTPANTPQRNATSMEVRFTFDANGNLRGETIPKLG
                     ENAEIGMRAQFAQLNAQNRARAEEQIMAASGFDGRGQLQIQGVPVDLTRPFGYRMAFQ
                     AEDYADFSVAGGMAVPDPPGGESVRGLYATASAPANETPFYCNASLREETYRLQFPAN
                     APIIAIPASQRFSNAAGEYRVDWSREGQDVVVRHRLQQNAVRGPEALCQPQDYTAFRA
                     LYREVRRGFRGQVLYGKLPGSGG"
     gene            5691..>6318
                     /gene="lolA"
                     /locus_tag="QEL58_003460"
     CDS             5691..>6318
                     /gene="lolA"
                     /locus_tag="QEL58_003460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein chaperone LolA"
                     /protein_id="HDS1677893.1"
                     /translation="MNFRFRRFLATTTLAVACAAAGSAWAGARDDLKSFTSGLKGLDG
                     QFSQQVFDSRGKVKESTSGRVALSAPRLFRWEYVRPHEQLIVADGKKVWMYEPDLEQA
                     TVREQGKEEQNSPLTALINPALLEQQYDLSEEAAQRDGLQWLSLSPKRDTEASFQYAA
                     LGFNAQGLAKMEITDAVGQRTVITFSGWKRNPGFAAGTFSFTPPKGTDV"
BASE COUNT         1083 a         2095 c         2134 g         1006 t
ORIGIN      
        1 ggcccgacgc tacggcacgc ggtcagcgtt tcagctggcc ttgccctgtg cgtccaggta
       61 gcgctcggca tccagtgcgg ccatgcagcc gaagccggcc gaagtgattg cctggcggta
      121 gtgctggtcg gccacgtcgc cggccgcgaa cacgccttcc accgaggtct gggtggcgtt
      181 gccgcccagg cccgaacgga tttccaggta gccgttgttc atcgccagct ggccgtcgaa
      241 cagggtggtg ttcgggtggt ggccgatggc cacgaagaag ccgtgggcgt cgatgtcgcg
      301 ggtgctgccg tccagggtgg acttcacgcg cacgccggtc acgccggcat cgttgcccag
      361 cacttcctcc acctggtggt gccagacggt ctcgatcttg ccctcggcca ccttcttgaa
      421 cagcttgtcc tgcatgatct tttccgcctt cagggtgtcg cggcggtgga ccaggtagac
      481 cttgcgggcg atgttggaca ggtacagcgc ctcttccacg gcggtattgc cgccaccgac
      541 cacgaccacg tcctggtcgc ggtagaagaa accgtcacag gtggcgcagg cggacacgcc
      601 gcggcccttg aattcgtcct cggtcgggat gcccaggtac ttggcggtgg cgccggtggc
      661 gatgatcagg gcatcgcagg tgtactcgtg gctgtcgccg atcagcttga acgggcgctg
      721 cgacacgtcg gcggtgtgga tgtggtcgaa gatgacctcg gtctcgaagc gctcggcgtg
      781 ggcctgcatg cgcgccatca ggtccgggcc catcaggccg tgggcgtcac ccggccagtt
      841 gtccacctcg gtggtggtca tcagctggcc gccctgctgc aggccggtga tgacgaccgg
      901 cttcaggttg gcgcgggcgg cgtagacggc ggcggtccag ccggccgggc cggaaccgag
      961 gatgacgagg cgctggtggc gggagggcag gctggtgctc atgtagactc gcgaaaaggt
     1021 agatgggaca aggcgctggc gatgtttgcg cagcatccgt ggctggtcat agagtggcgg
     1081 ctggggcagg gcgattcaag ccgatgaaca gaacgccgtc atccagcggt agttgcggcg
     1141 ccccggatgc cccgtgaaac gtcgcataac tgaaaactga cgccgtctca tttattatca
     1201 atcactaaca gcgcattcca aaggtatggt ctaaggtggc gaagcaggtc cccgaacgct
     1261 ccaagtccga cgacagcaag gcgtcacgtc gcacggccgc ggcggcgacg accgacaatc
     1321 cacgccgcca acgcctctgg cgcgaccttg gcctgatcgc catcgcgccg gccctgctgt
     1381 acctggcggc cagtctgttc acctattcag ctaccgatcc gggctggtcg cataccggca
     1441 gcgtggtcgc gccggtacac aacctcggcg gccgtgccgg agcgtggatc gccgatgtgc
     1501 tgctgcagct gttcggctac gtcgccttcc tgctgccggt ggtgctgggc gcactggcgt
     1561 ggatcgccat gttcggcctc aagcgcgaga gcaagggcga gaacgacctg gacccggcgc
     1621 tgcgcctggt cgggctggtc ggcttcctga tcgccggcac cggcttcctg catgtgcgcc
     1681 tgttcagtgg cgacgtgtcc agcgccggcg gcatcctcgg caagctggtc ggcaattcgc
     1741 tcacggtggg cttcggtgcg ctgggtgcga acctgttcgt gctggtgctg ctgctggcct
     1801 cgatcaccct ggcgaccggg ctgtcctggt tcacggtgat ggagaagatc ggacgcggcg
     1861 tgatgtcgct ggcaccgttg ctggcgcgca agaaggaaga ggtcaccgag tggcagcaga
     1921 cccgggtgat gcgcgaggag cgtcaggaag tgcgcaaggc cgatgccgag gtgcgcgcca
     1981 agcgcgagcc ggtgaagatc gagccgcgcc ccgagccggt gatcgagaag agtgaccggg
     2041 ccaagcgcga cacgcagatc ccgatgttcc gtggcgtcaa tggcgacgga tcggacctgc
     2101 cgccgctggc cctgctggac gatcccaagc cgcagccggt gggctacgac aaggaaaccc
     2161 tggacgcgct gtcgcggcag atcgagttca agctgaagga tttccgcatc gacgcccagg
     2221 tggtcggtgc caatcccggc ccggtcatca cccgcttcga gatcgagcct gcgccgggca
     2281 tcaaggtcag ccagatcagt tcgctggaca aggacatcgc gcgcggcctg tcggtgaaat
     2341 cggtgcgcgt ggtcgacgtg attccgggca agtcggtgat cggcctggaa atccccaacg
     2401 tcacccgcga gatgatctac ctgtccgagc tgttgcgctc caaggagtac gacaagtcgg
     2461 ccagcgtgct gaccctggcg ctgggcaagg acatcgccgg ccgctccacc gtggccgacc
     2521 tggcgcgcat gccgcacctg ctggtggccg gtaccaccgg ttcgggcaag tcggtggcgg
     2581 tcaacgcgat ggtgctgagc ctgctgttca aggcctcgcc gaaagacctg cggatgctga
     2641 tgatcgaccc caagatgctc gaactgagcg tctaccaggg catcccgcac ctgctggcgc
     2701 cggtggtcac cgacatgaag gaggccgcca acggcctgcg ctggtgcgtg gccgagatgg
     2761 agcgccgcta caagctgatg agcgcggtgg gcgtgcgcaa cctggccggc ttcaacaaga
     2821 aggtgaagga agcgcaggac gccggccagc cgctgatgga cccgctgttc aagccgaacc
     2881 cggaactggg cgaggcgccg cgcccgctgg agacgctgcc gttcatcgtc atcttcatcg
     2941 atgaattcgc cgacatgatg atgatcgtcg gcaagaaggt ggaagagctg atcgcgcgcc
     3001 tggcgcagaa ggcgcgtgcg gccggcatcc acctgatcct ggccacgcag cgcccgtcgg
     3061 tggacgtgat caccggcctg atcaaggcca acatcccgac ccgcatcgcc ttccaggtca
     3121 gctccaagat cgactcgcgc accatcctcg accagtccgg tgcggaaacc ctgctgggcc
     3181 acggcgacat gctttacctg ccgccaggca ccgccatgcc cgagcgcgta cacggcgcgt
     3241 tcgtctccga cgaggaagtg catcgcgtgg tcgaacacct caaggcgatg ggcccggccg
     3301 actatgtcga cggcgtgctg gacgaagtgc agacgatggg tgacggcgta gtcgtcggcg
     3361 ccaccggcct gcccgagaac agctctgccg gcgatgagtc cgacccgttg tatgacgaag
     3421 cgctgcgggt ggtcaccgag acccgccgtg cctcgatttc cggtgtgcag cgccggctga
     3481 agatcggcta caaccgtgca gcgcgactga tcgaggccat ggaagcggcc ggcgtggtca
     3541 gcccgcccga gcacaacggc gaccgcacgg tgctggcacc gccgccgccg aagtaagacc
     3601 cgacgtatcc cccacgacgt ccaaggaacc gacgcatgct tcaccccgta cccagcgcgc
     3661 tggcactggc gctggcagcc ttcctggctg ccggcccggc cctggcagac accgccacct
     3721 ccgcgcccgc tacggcgccg ccttccacca gcggcgacac cgaagccagc aacaatttca
     3781 gcattgtccg ttaccgcgcc gactaccagg tgcggcccga tgcgggcaat gtgcagaccg
     3841 aaacctacga agtcctgctc aagaccaagg cctccgtcga gcagttcagc caggtgcggc
     3901 tgagctacag cgagaagatg gagacgctgg aagtgctcgg cgcctacacc atcaccgccg
     3961 acggccagcg ccgcgccgtg ccggccgacc gcatctacac ccaggaaagc tactccagcg
     4021 cctcggcggc gatgtacgcc gaccgcaagg tgcgggtgat cgtgttcccg aacctggccc
     4081 ccggcacccg gctgtactac caggtgcgcc ggacccagac caccccgtat ttcccgggct
     4141 atttcggcct gtgggaaacc ttcaatgtgt tcaccgaata cgaggacgcc gaggtcaccc
     4201 tcagtgcgcc ggccaacctg ccgatgttcg tggacagtcg cggcgtgcag ggcagtgatc
     4261 gcccgacggt gaagaacggc caggcgcagt ggcgctggcg ctaccagcgt cgcgaggcga
     4321 tgccggcgca gaactggtcg gcggcaggct gggagttcgg cccgaacatc atggccagca
     4381 cctatcgtga ctggtcgcag atgggccgcg cttatcagct caaggctggc ccggcggcgc
     4441 aggtcacccc ggagctgcag gcactggccg accaggtgac cgccggcatc agcgaccgcc
     4501 gcgagcaggc cgatgcgctg taccgctggg tggcgcagaa catccgctat gtggcggtgt
     4561 acctgggcaa cggtggcctg gagccgaaca gcgcgcagag catcctcgac aaccactatg
     4621 gcgactgcaa ggaccacgta acgatcctgg aggcattgct ggcggccaag ggcatcgcca
     4681 gttcgccggt gctgatcgga gcgggcggtg gcccgaccct gccgaagatt ccggtactgg
     4741 gccgcttcaa ccacgccatc acctacattc ccgagtttga tctgtacctg gattcgacca
     4801 ctgcgtgggc gcgcttcggc cagctgcccg agggcgacct cggtgcaccg gtgatgcgta
     4861 cccgcgacgc cacgctggca cgcacgccgg ccaacacgcc gcagcgcaat gccacgtcca
     4921 tggaagtgcg cttcaccttc gatgccaatg gcaacctgcg tggcgaaacg attccgaagc
     4981 tgggcgagaa cgccgaaatc ggcatgcgtg cgcagttcgc ccagctcaac gcgcagaacc
     5041 gtgcgcgcgc tgaagagcag atcatggccg cgtccggctt cgatgggcga gggcagctgc
     5101 agatccaggg cgtgccggtc gacctgaccc ggccgttcgg ctaccgcatg gcgttccagg
     5161 ccgaggacta cgccgatttc agcgtggccg gcggcatggc cgtgccggac ccgccggggg
     5221 gcgagtcggt gcgcgggctg tacgccaccg catcggcgcc ggccaacgag accccgttct
     5281 actgcaacgc cagcctgcgc gaggaaacct atcgcctgca gttcccggcc aacgcaccga
     5341 tcatcgccat tccggccagc cagcgtttca gcaacgctgc gggcgagtac cgggtggact
     5401 ggagccgcga gggccaggac gtggtcgtgc gccatcgcct ccagcagaac gcggtgcgtg
     5461 gcccggaggc gctgtgccag ccgcaggact acaccgcgtt ccgcgcgctg taccgcgagg
     5521 tacgccgtgg cttccgcggg caggtgctgt acggcaagct gccgggctct ggcggctgaa
     5581 tcgccgatgg acgttggggg cggcataatg tcgccctgat cgcccattca tctttgcccg
     5641 ggcacactgg ctaccacctt tcctggcgca tgcgcccaca ggattcctgc atgaacttcc
     5701 gcttccgtcg tttccttgcc accaccaccc tggccgtcgc ctgcgccgct gccggcagcg
     5761 cctgggccgg tgcccgcgat gacctgaaga gcttcaccag tggcctgaag ggcctggatg
     5821 gccagttcag ccagcaggtg ttcgacagcc gcggcaaggt gaaggaatcg accagtggcc
     5881 gtgtggcgct gtcggcgccg cgcctgttcc gctgggagta cgtgcgcccg cacgaacagc
     5941 tgatcgtggc cgatggcaag aaggtctgga tgtacgagcc ggacctggaa caggccaccg
     6001 tgcgcgagca gggcaaggaa gagcagaaca gcccgctgac cgcgctgatc aatccggcgc
     6061 tgctggagca gcagtacgac ctcagcgagg aagccgcgca gcgcgacggc ctgcagtggt
     6121 tgtcgctgtc gccgaagcgc gacaccgaag ccagcttcca gtacgccgcg ctgggcttca
     6181 acgcccaggg cctggccaag atggaaatca ccgacgccgt cggccagcgc accgtgatca
     6241 ccttcagtgg ctggaagcgc aacccgggct tcgccgccgg caccttcagc ttcaccccgc
     6301 cgaagggcac cgacgtca
//
LOCUS       DAOKIP010000221         6282 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.222,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000221 DAOKIP010000000
VERSION     DAOKIP010000221.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 6282)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6282)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6282
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.222"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(71..967)
                     /locus_tag="QEL58_003461"
     CDS             complement(71..967)
                     /locus_tag="QEL58_003461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012480853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HDS1677894.1"
                     /translation="MRNDPFSRSPQGPQRRGLFGNIRWWVLLLAAGYAVFYWFSNRTV
                     DPYTGEKVMIDSSLDARQETALGLQAYQQILSQERPMDPNAPIARDVRDIAQRLIAKV
                     DVVETALAQEHGVQPAHFARDFQWEVNVIPSEQANAFCLPGGKMAVYTGLVPVARTRD
                     AMAVVMGHEIAHALLRHGAQRMAQQKLTQIGQVAGAASGMDARQQQMMMSAMGYGYLL
                     PYARSHETQADEVGLMLAAAACFDPREAVPLWQRMGQASGGQAPPEFASTHPNPGTRI
                     QNLQALMPKALEYRQKFCEQAK"
     gene            complement(1056..2942)
                     /locus_tag="QEL58_003462"
     CDS             complement(1056..2942)
                     /locus_tag="QEL58_003462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019336851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formylglycine-generating enzyme family protein"
                     /protein_id="HDS1677895.1"
                     /translation="MRFPLSPALCTALAVALAGCTPSPSSTPERAADEPARPQEGAAA
                     DRTAAAGQGSVTIAGEDAAEDVQYWTPPRVDREGRSLAQLRRAAEQAFAEGRLYEDAD
                     AAIPLWLAVQEENPDDRQARQGLQRARQGLQQQADALLVRPLKQREALAEASRQALVL
                     LSLAPKDEKVRALQGRVETAQRVVAYNRAGEEDLRSDRIGEDGDGAIGNFREALALDE
                     RNGRARQGLAAAESGLIRRAEDAARARDFAGAGTWLAEASKVRDSSPTIADAFERIEQ
                     IRAATLLQLRDDGLRDLATPQGLKPAREKLAEALRIALPGDAVVGQLRERIDLATHYG
                     SFRPGQVFSDAMRDGGRGPQMVVVPHGGFQMGAGDAEPGASDAERPSHYVRFDRGFAM
                     AITEVTVSDFERYVKATSARPRATRRGHSVVYDERSGNFIRRSGVDWRSDYDGGRALG
                     NSPVMHVSVRDAENYAAWLSEQTGRSYRLPSEAEFEYALRAGSSGRYPWGDAGTPPPG
                     SGNFTGSKDVSPSGRHWHNAFIGYGDGWWGPAPVATFQANAFGLHDMGGNLSEWVADC
                     WHASYRRAPSDGVAWFNPGCRSRVIRGGNWANAPEQSRAAWRQSQDSDTTNARIGFRL
                     VRGI"
     gene            3027..4106
                     /gene="rnd"
                     /locus_tag="QEL58_003463"
     CDS             3027..4106
                     /gene="rnd"
                     /locus_tag="QEL58_003463"
                     /EC_number="3.1.13.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005417789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease D"
                     /protein_id="HDS1677896.1"
                     /translation="MATWITTPAELDAYFQQRPSRIGLDTEFIRERTFWPQLALVQMA
                     VGQDILLIDPLIPGMTEALAPWLADESITKVMHSASEDLVAFKWACGVLPRPLFDTQI
                     GASLAGIGGGMGYQKLVAEITCVALAKGETRSDWMRRPLSESQLQYAADDVEHLFALH
                     DAIDARLQALGRQQWLHDDGERLLASVANDEDRWPHLAMRSAQFLDAAAQRRLLRLLR
                     WRDVQARSSDRPRSWILDNELAATLARTPPADADALGALFEQFPKAPRKLAGAVWQAL
                     QTPLADEAEAPLALPANDSNKQALKKLQDAVAERSRELGLPDGVLASRKHLESYLERR
                     QWPAALAGWRQQELESRLQALLPAR"
     gene            4225..>6282
                     /locus_tag="QEL58_003464"
     CDS             4225..>6282
                     /locus_tag="QEL58_003464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4034 domain-containing protein"
                     /protein_id="HDS1677897.1"
                     /translation="MTDGTAKDGLSAEDLAWRAAARAAMQERRYAELDALLAPHEQAW
                     LDGERPLPGIRWRLRNLHDKALTLDERLQQAQQWVAAAPHSYYAHLRLGACWESAAGE
                     LRSADVAALVEDSQWLAAQQARDHAVHAYLQAIPLSARPALALDGIKRITSYLREPDW
                     LRALQAGQVPEPEEVALAEHYPQAWPQALQLLSRFGAPLRTLPGSLPPVLRERSQDDF
                     DAPLAYWMRLVLEQRADDLSTLEDTLYYLYPRWGGSHEAMEDFIEGGWCRGLELAQSN
                     ALRWRKEQDWMADLPHREDADAVGVHERAYAQILDWHLDRNLRAEVLAQRSGLRYRLG
                     RIEGSEDQVQWDAGRMRAVFEDLQQAWALDRDMVLHEGFSNLEACTWFARVEGAEALF
                     AQVVDYAAREGDSAIGLLWAATAVEHGLLGQTTDPMRADALLQRALTLAPQDNTSAVT
                     FASNLFCDVSQSAGLSLLQRMAEAGDAGAMSALCDLYKGRLCGRDQPQFVDAEKAAYW
                     QERAVEGGDLIATYNLGVRLVAAGGEHNEARARELYLRCLDGSEAGERVWGPTCRNLA
                     CLAMDGQNDAHKREAVERALIPLWWRGDDDDKLWAAGYLADIYHFGNGVPANAFLALA
                     WLQRASEIDPEYVDVVRMAPLINGEGRWFGASRARKQQAQDRQQVDSATWALTFGQRS
                     QESD"
BASE COUNT          994 a         2227 c         2109 g          952 t
ORIGIN      
        1 atacccgctg ttgctgttgc tgttgctctg gcttcggcgg gtgcagggcg cagccctgcc
       61 gagcaacgcc ctacttcgcc tgctcgcaga acttctgccg gtactcgagc gccttcggca
      121 tcagcgcctg caggttctgg atgcgcgtac ccgggttcgg atgggtggac gcgaactccg
      181 gcggcgcctg gccgccactg gcctgtccca tgcgctgcca caacggcacc gcctcgcgcg
      241 gatcgaagca tgccgctgcg gccagcatca gccccacttc gtcggcctgc gtctcgtggc
      301 tgcgcgcgta gggcaacagg taaccgtagc ccatcgccga catcatcatc tgttgctgcc
      361 gtgcatccat gccgctggcg gcaccggcca cctggccgat ctgggtcagc ttctgctgcg
      421 ccatgcgctg ggcgccatgc cgcagcagcg catgggcgat ctcgtggccc atcaccaccg
      481 ccatcgcatc gcgcgtacgc gccaccggca ccaggccggt atagaccgcc atcttgccgc
      541 ccggcaggca gaacgcattg gcctgctcgg agggaatcac gttcacttcc cactggaaat
      601 cccgtgcgaa atgcgccggc tgcacgccat gctcctgcgc cagcgcagtc tccaccacgt
      661 cgaccttggc gatcagccgc tgggcaatgt cgcgcacgtc gcgtgcgatc ggtgcgttgg
      721 gatccatcgg ccgttcctgc gacaggatct gctggtaggc ctgcagcccc agcgcagtct
      781 cctggcgcgc gtccaggctg ctgtcgatca tcaccttctc gccggtatag ggatcgaccg
      841 tgcggttgga gaaccagtag aacaccgcgt agccggcggc cagcagcagc acccaccagc
      901 ggatgttgcc gaacaggcca cgacgctgcg ggccttgggg cgagcgggaa aagggatcgt
      961 tgcgcatcgg gtggtcgtcc ggcaggcccc gccggccggc gggcacggcg caatcttagt
     1021 gtgccgacgc cattggaggg tgaagccggg ccggctcaga taccgcgcac cagccggaaa
     1081 ccgatacgtg cgttggtggt atccgaatcc tgcgattgcc gccaggccgc acggctctgc
     1141 tccggcgcgt tggcccagtt gccaccacgg atgacccggg accggcaacc cgggttgaac
     1201 caggccacgc catcggaagg ggcccgccgg tagctggcgt gccagcagtc agcgacccat
     1261 tcgctcagat tgccgcccat atcgtgcagg ccgaaggcat tggcctggaa cgtggcgact
     1321 ggcgccggtc cccaccagcc atcgccatag ccgatgaacg cgttgtgcca gtgccgcccc
     1381 gacggcgata cgtccttgct gccggtgaaa ttgccactgc ccggcggtgg tgtgccggca
     1441 tccccccagg ggtaacggcc gctgctgccg gcgcgcagcg catattcgaa ctcggcctcg
     1501 ctgggcaggc ggtagctgcg cccggtctgc tcggacagcc acgccgcgta gttctcggca
     1561 tcacgcacgc tcacgtgcat caccggtgag ttgcccagtg cacgaccgcc gtcgtagtcc
     1621 gagcgccaat ccacgccact gcggcggatg aagttgccgc tgcgctcgtc atagaccacc
     1681 gaatggccac ggcgggttgc gcgcgggcgc gcgctggtcg ccttcacgta gcgctcgaaa
     1741 tcgctgacag tgacctcggt gatcgccatc gcgaagccgc gatcgaagcg cacatagtgc
     1801 gacggacgct cggcatcact ggcacccggc tcggcatcgc cggcccccat ctggaaaccg
     1861 ccatgcggca ccaccaccat ctgtggcccc cgcccgccat cgcgcatggc atcgctgaac
     1921 acctgcccgg gacggaagct gccgtagtgg gtggccaggt cgatgcgttc gcgcagctgg
     1981 cccaccaccg catcgcccgg cagggcgatg cgcagggcct cggccagctt ttcacgcgcc
     2041 ggcttcagtc cctgtggtgt cgccaggtcg cgcaggccgt catcacgcaa ttgcagcagc
     2101 gtggcggcac ggatctgttc gatgcgctcg aacgcatcgg cgatggtcgg cgacgaatcg
     2161 cgcaccttgc ttgcctcggc cagccaggtg cccgcgccgg cgaaatcccg tgcccgcgcg
     2221 gcgtcctcgg cacgacggat caacccgctc tcggcggccg ccagtccttg ccgcgcacgc
     2281 ccattgcgct catccagcgc cagcgcctca cggaagttgc cgatggcgcc gtcgccatcc
     2341 tcgccaatcc ggtccgagcg caggtcctct tcgccggcgc ggttgtacgc caccacgcgc
     2401 tgcgcggtct cgacccgccc ctgcagtgcg cgcactttct cgtccttcgg cgccaggctg
     2461 agcagcacca gtgcctggcg gctggcctcg gccagtgcct cgcgctgctt cagcggccgt
     2521 accagcagcg catcggcttg ctgttgcaag ccctggcggg cgcgctgcag gccctgccgg
     2581 gcctggcggt catccggatt ctcctcctgt accgccagcc acaagggaat ggcagcgtcg
     2641 gcatcctcgt agagccggcc ttcggcaaag gcctgctcgg ccgcgcgccg cagctgcgcc
     2701 aggctgcgtc cctcccggtc cacccgcggc ggcgtccagt actgcacgtc ctcggcggca
     2761 tcctcaccgg caatggtcac gctgccctgc ccggccgccg ctgtccggtc cgccgccgcg
     2821 ccttcctgtg gccgcgccgg ttcgtcagcg gcgcgctccg gcgtcgacga tggcgacggt
     2881 gtgcagccgg ccagggcaac ggccagggcg gtgcacagcg cgggcgacaa cggaaaacgc
     2941 aagcaggacc tccttctgca cggacgcgga ccgacgttag gctattctcc cctgcctgag
     3001 caaacccgag tagtaggccc tgacccgtgg caacctggat caccaccccc gccgagctgg
     3061 atgcgtactt ccagcagcgc ccgagccgca tcggcctcga caccgaattc atccgtgaac
     3121 gcaccttctg gccgcagctg gcgctggtgc agatggccgt cgggcaggac atcctgctga
     3181 tcgacccgct gattcccggc atgaccgaag cgctggcacc gtggctggcc gatgaatcga
     3241 tcaccaaggt gatgcacagc gccagcgaag acctggtcgc gttcaagtgg gcctgcggcg
     3301 tgctgccgcg cccgttgttc gacacccaga tcggtgcctc gctggccggc atcggtggtg
     3361 gcatgggtta ccagaagctg gtggcggaaa tcacttgcgt ggccctggcc aagggcgaaa
     3421 cccgctcgga ctggatgcgc cgcccacttt cggagtcgca gctgcagtac gccgccgacg
     3481 atgtagagca cctgtttgcc ctgcatgacg ccatcgatgc caggctgcag gcgctgggcc
     3541 gccagcagtg gctgcacgac gatggcgagc gcctgctggc cagcgttgcc aacgacgaag
     3601 accgctggcc acacctggcg atgcgctcgg cgcagttcct cgatgccgcc gcacagcgcc
     3661 gcctgctgcg cctgctgcgt tggcgcgacg tgcaggcgcg cagcagcgat cgtccgcgca
     3721 gctggatcct ggacaacgaa ctggccgcca ccctggcgcg cacgccaccg gccgacgccg
     3781 acgcgctggg cgcgctgttc gagcagttcc ccaaggcacc gcgcaagctg gccggtgccg
     3841 tgtggcaggc cctgcagacg ccgctggccg atgaagccga ggcaccgctg gcattgccgg
     3901 ccaacgacag caacaagcag gcgctgaaga agctgcagga tgcggtggcc gagcgcagcc
     3961 gcgaactggg cctaccggat ggggtactgg cgtcacgcaa gcacctggag agctacctgg
     4021 aacgtcgcca atggcccgct gcattggccg gctggcgcca gcaggaactg gaatcgcgac
     4081 tgcaggccct gctgcccgcg cgctgatggt gccgggcgtc gggattgccc cggcgcctgc
     4141 acggtgaatc gaacatccgc cacgcttgcc gacgcgggcg tgcgcctgtc caatagcgtc
     4201 cccgctatcg ttggactgca acagatgaca gatggaactg cgaaggacgg cctttccgcc
     4261 gaggacctgg cctggcgtgc agcagcgcgc gccgcaatgc aggaacggcg ctacgccgaa
     4321 ctggatgcac tgctggcacc gcacgaacag gcatggctgg atggtgaaag gccgctgccg
     4381 ggcatccgct ggcgcctgcg caacctgcat gacaaggcac tgaccctgga cgagcgcctt
     4441 cagcaggcgc agcaatgggt cgctgccgcg ccgcacagct actacgcgca cctgcgcctc
     4501 ggcgcctgct gggaatccgc cgccggcgaa ctgcgcagcg ccgacgtcgc cgcactggtc
     4561 gaagacagcc agtggctggc cgcacagcag gcgcgcgacc atgccgtgca tgcctacctg
     4621 caggcaatcc cgctgtcggc gcgaccggca ttggcgctgg atggcatcaa gcgcatcacc
     4681 agctacctgc gcgagccgga ctggctgcgt gcgctgcagg ccggccaggt gcccgagccc
     4741 gaggaagtgg cgctggccga gcactatccg caagcctggc cgcaggcatt gcagctgctg
     4801 tcacgcttcg gcgctccgct gcggacgctg cccggcagcc tgccgcccgt gctgcgcgag
     4861 cgcagccagg acgatttcga tgcaccgttg gcctactgga tgcgcctggt gctggaacag
     4921 cgcgccgacg acctgagcac gctggaagac accctctatt acctgtaccc gcgctggggc
     4981 ggcagccatg aagccatgga ggacttcatc gaaggaggct ggtgccgtgg cctggagctt
     5041 gcgcagagca acgcgctgcg ttggcgaaag gaacaggatt ggatggccga cctgccacac
     5101 cgcgaagatg ccgacgcggt aggcgtgcac gagcgtgcgt atgcacagat cctggactgg
     5161 cacctggacc gcaacctgcg cgctgaggtt ctggcccagc gttcggggct gcgctaccgg
     5221 ctcggccgga tcgaaggcag cgaagaccag gtgcagtggg acgccgggcg catgcgggca
     5281 gtgttcgagg atctgcagca ggcgtgggcg ctggaccgcg acatggtgct gcacgaaggc
     5341 ttcagcaacc tggaagcctg cacctggttc gcccgcgtgg aaggcgccga ggcactgttc
     5401 gcgcaggtgg tggactacgc tgcacgcgaa ggcgactccg cgatcggcct gctctgggcc
     5461 gccaccgccg tcgagcatgg actgctcggc cagaccaccg accccatgcg cgccgatgcc
     5521 ctgctgcagc gcgccctgac gctggcgccg caggacaaca cctcggcggt cacctttgcc
     5581 tccaacctgt tctgcgatgt ctcgcagtcc gccggactct cgctgctgca gcgcatggcc
     5641 gaagccggcg acgccggcgc gatgtcggca ctgtgcgacc tgtacaaggg ccgcctctgc
     5701 ggccgcgacc agccgcagtt cgtcgatgcg gaaaaggccg cctactggca ggagcgtgcg
     5761 gtggaaggcg gcgacctgat cgccacctac aacctgggcg tgcgcctggt ggcggccgga
     5821 ggcgagcaca acgaagcgcg tgcacgtgaa ctgtacctgc gctgcctgga cgggtccgag
     5881 gcaggcgagc gcgtctgggg ccccacctgc cgcaacctgg cctgcctggc gatggatggc
     5941 cagaacgacg cacacaagcg cgaagcggtc gaacgcgcgc tgatcccgct gtggtggcgc
     6001 ggtgacgacg acgacaagct gtgggccgcc ggctacctgg ccgacatcta ccacttcggc
     6061 aacggcgtgc cggccaacgc gttcctggcc ctggcctggc tgcagcgcgc cagcgagatc
     6121 gacccggagt acgtggacgt ggtgcgcatg gcgccgctga tcaatggcga agggcgctgg
     6181 ttcggcgcca gccgtgcgcg caagcagcag gcgcaggacc ggcagcaggt ggacagcgcc
     6241 acctgggccc tgaccttcgg ccagcgcagc caggaaagcg ac
//
LOCUS       DAOKIP010000222         6280 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.223,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000222 DAOKIP010000000
VERSION     DAOKIP010000222.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 6280)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6280)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6280
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.223"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..538)
                     /gene="hslV"
                     /locus_tag="QEL58_003465"
     CDS             complement(<1..538)
                     /gene="hslV"
                     /locus_tag="QEL58_003465"
                     /EC_number="3.4.25.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011260360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease subunit HslV"
                     /protein_id="HDS1677898.1"
                     /translation="MDPSQNPNVFHATTIVCVRRGEHVAIAGDGQVTLGHTVMKGNAR
                     KVRRLGRDGQVLAGFAGAAADAFTLFELFEAKLEKHGQLQRAAVELAKDWRTERRLGK
                     LEALLAVADKETSLIISGTGDVIEPEDGIIAIGSGGSYALSAARALMAHTELDARTIA
                     SEAIGIAGDICIYTNRNVV"
     gene            complement(613..813)
                     /locus_tag="QEL58_003466"
     CDS             complement(613..813)
                     /locus_tag="QEL58_003466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010481389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3079 domain-containing protein"
                     /protein_id="HDS1677899.1"
                     /translation="MAKPIPLHPKHPERICWGCDRYCAADALACGNGSGRTQHPIETQ
                     GEDWYLAWGIEPNPERPSQAKR"
     gene            complement(891..1781)
                     /gene="xerC"
                     /locus_tag="QEL58_003467"
     CDS             complement(891..1781)
                     /gene="xerC"
                     /locus_tag="QEL58_003467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine recombinase XerC"
                     /protein_id="HDS1677900.1"
                     /translation="MSAVQAFLQHLQVERRMSAHTLDAYRRDLDALSAWAEPRGMAVE
                     ALDAETLRQFVADEHRRGLSAKSLQRRLSACRSFYAWLLKHGRIEVSPAATLKAPRAP
                     RRLPQVLDADEAVQLVELEPEGELGRRDRALLELFYSSGLRLSEVCALTWRDLDFASG
                     LVNVMGKGNRQRRVPFGRPAREALQAWRAESGGGPASPVFPGRNGPISQRAVQIRIRQ
                     LAQRQGLFKHVHPHMLRHSFASHILESSGDLRGVQELLGHADIATTQIYTHLDFQHLA
                     KVYDAAHPRAKRRSKGDKAE"
     gene            complement(1798..2472)
                     /locus_tag="QEL58_003468"
     CDS             complement(1798..2472)
                     /locus_tag="QEL58_003468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014038534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF484 family protein"
                     /protein_id="HDS1677901.1"
                     /translation="MTETVDKLGAHEVAAWLRRHPGFLKQFPDLALTLVVPRDDGPTA
                     SLASYQLEVLREKNRELARRLADLGATAQVNERLAVRTHQLTLALMKQDNAADTLRAM
                     AASLQEDFAGDLVRLVVHTPVAGLEQADWLQVIAADDPQLGPFRDCLKDGEPICGRLQ
                     PEKNAVLYGVRSEEVQTTALLPLPGVGLIAVGSHDPNRFYPGMGTLFLRMMGDALVTG
                     LKRFAG"
     gene            complement(2469..3320)
                     /locus_tag="QEL58_003469"
     CDS             complement(2469..3320)
                     /locus_tag="QEL58_003469"
                     /EC_number="5.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014038535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate epimerase"
                     /protein_id="HDS1677902.1"
                     /translation="MGKAGSSALRFSKMHGAGNDFVVIDLRDGTAPPTPELAARLADR
                     HTGVGCDQILTIEAPRADGSVASYRIWNADGSNSEQCGNGARCIAAWLVREGSAQGDA
                     FVIDSPLASHEVKVLGDGQFAVTMGVPAFEPANVPLMGFAHAREEYLLPLQGESVRFA
                     AVSMGNPHAVIEVGLIDAAPVERVGSLLQQHASFPRSVNVGFAQVMGPAHARLRVFER
                     GVGETLACGSGACAAAVTLMQRGRLQHDARISLPGGDLRIQWPGDGQPVVMAGPTAFV
                     FEGEWIA"
     gene            complement(3313..3585)
                     /locus_tag="QEL58_003470"
     CDS             complement(3313..3585)
                     /locus_tag="QEL58_003470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005419448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HDS1677903.1"
                     /translation="MKIPHRNVILIPLAAASLLFLAACGNKGPLVLPQKPVPVEEAVE
                     PAAEPATEATPAQTQGSDTPATTADPAAPTTPPAPAPAKKAGGGNG"
     gene            complement(3655..4080)
                     /locus_tag="QEL58_003471"
     CDS             complement(3655..4080)
                     /locus_tag="QEL58_003471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbaN family protein"
                     /protein_id="HDS1677904.1"
                     /translation="MSAPDPSAPRDAPAPPRVVRFRWAWWLLAYVSLGTGIVGIFVPG
                     LPTTVFILISAWAASRGSERLHTWLIQHPRFGPAIANWQAHGAVSRYGKWMATITMAV
                     CAAIMLWCVPIAWVKWFSIGSMTVVAIWLWTRPLPPPER"
     gene            complement(4135..6246)
                     /locus_tag="QEL58_003472"
     CDS             complement(4135..6246)
                     /locus_tag="QEL58_003472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019337665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S9 family peptidase"
                     /protein_id="HDS1677905.1"
                     /translation="MKSTLCLLLASLMTTTATAATPPVPPDAAKHPHVVKAPFGATRN
                     DDYYWLRDDKRENKDMLAYLQAENAYADQLLAPLKPLEDTLYKEIVGRIKQDDSSVPA
                     RERGYWYYSRFETGQDYPIHARRKGGMDAAEEVLLDVNTMAAGKGYFSVGSMEVSQDN
                     QLLAWADDDVGRRQYTIRFKDLRTGQVLPDVITGSSGDLVWADDNRTVLYVENDPETL
                     LTVRVKKHVLGTPASADTVVYEEKDDSFYMGIGRTRDDRFITIGVHSTVSSEERYAPA
                     SDPTTFTVLAPRQRDVEYDADHYDGRWVIRTNDGAKNFKLVTAPTDATSRAQWKDWIA
                     HDDAVFIEGFELFDSYTAIAERSEGLERIRLLFKDGRSDYVRADEPAYSMGLGDNTEA
                     DTPWLRYVYTSMTTPTTVFELNTATGERRQLKVQPVIGYDASKYETDRVWITARDGVK
                     VPVSLVYRKGYQKDGRGALFQYAYGSYGMSMDPYFNQTAVSLLDRGVVYAIAHIRGGQ
                     EMGRDWYENGKLLHKQNTFNDFIDVTRGLVAQGWAAKDRVAASGGSAGGLLMGAVANQ
                     APQDYRVMVAQVPFVDVVTTMLDPTIPLTTNEYDEWGNPEQKPYYDYMLSYSPYDNVK
                     RQAYPALFVGTGLWDSQVQYWEPAKWVAKLRDDNTGQYPILFRTNMEAGHGGKSGRFQ
                     RYRELSESYAFVLQQLGIVQP"
BASE COUNT          967 a         2112 c         2133 g         1068 t
ORIGIN      
        1 ccaccacgtt gcggttggtg tagatgcaga tgtcgccggc gatgccgatc gcctcgctgg
       61 caatggtgcg tgcatccagt tcggtatgcg ccatcagcgc gcgcgcagcc gacaatgcat
      121 aggagccacc ggaaccgatg gcgatgatgc cgtcctccgg ctcgatcaca tcgccggtgc
      181 cgctgatgat cagcgaggtt tccttgtcgg ccaccgccag cagggcctcc agcttgccca
      241 ggcggcgctc ggtgcgccaa tccttggcca gctcgaccgc cgcgcgctgc agctggccgt
      301 gcttttccag cttggcctcg aacagctcga acagggtgaa ggcatcggcg gcggcgccgg
      361 cgaagccggc cagcacctgg ccgtcgcggc ccaggcggcg caccttgcgc gcattgccct
      421 tcatcacggt gtggcccagc gtgacctggc cgtcgccggc aatggccaca tgctcgccgc
      481 gacggacgca gacgatggtg gtggcgtgga aaacgttggg gttctgactg gggtccatgc
      541 ggcctccgat agctgttcac gggacatggg gacagcgccg ggtgcgatca agcctgcgcg
      601 gatggctgcc gttcagcgct ttgcttgcga aggccgctcc ggattgggct cgatccccca
      661 ggcgaggtac cagtcttcac cctgcgtctc gatcggatgc tgggtgcggc cggagccatt
      721 gccgcaggcc agcgcgtcgg ccgcgcagta gcggtcgcag ccccagcaga tacgctcggg
      781 gtgtttggga tgcaggggaa tcggcttcgc catggtggcg ctgtcctcgt ggcctgcggc
      841 cacggtgcgc cggttgcatc cgacctgccc tgatccagat caaggacggg ctattcagcc
      901 ttgtcgccct tgctgcggcg cttggcgcgt ggatgcgcgg cgtcgtagac cttggccagg
      961 tgctggaaat cgaggtgggt gtagatctgg gtggtggcga tgtccgcgtg gccgagcagt
     1021 tcctgcacgc cacgcaggtc accggacgat tccaggatgt ggctggcgaa actgtgccgc
     1081 agcatgtgcg ggtgcacgtg cttgaacagg ccctggcgct gcgccagctg gcggatgcgg
     1141 atctgcaccg cgcgttggct gatcggcccg ttgcggccgg gaaacaccgg cgaggccggg
     1201 ccgcccccgc tttccgcacg ccacgcctgc agtgcttcgc gtgccggccg cccgaacggt
     1261 acccggcgct ggcgattgcc cttgcccatc acgttgacca ggccgctggc gaagtccagg
     1321 tcgcgccagg tcagcgcgca gacttcgctc aggcgcaggc ccgaggaata gaacagctcc
     1381 agcagcgcgc gatcgcggcg gccgagttca ccttccggtt ccagttcgac cagctgcacc
     1441 gcttcgtcgg catcgagcac ctgcggcaac cgccgcggtg cacgcggcgc tttcagcgtc
     1501 gccgccgggc tgacctcgat gcggccgtgc ttcagcagcc acgcgtagaa actgcggcag
     1561 gcggacaagc ggcgctgcag gctcttggcc gacagcccac ggcgatgctc atcggcgacg
     1621 aactggcgca acgtttcggc atcgagcgct tccacggcca tgccacgcgg ctcggcccat
     1681 gccgacagcg cgtccaggtc gcggcggtag gcgtcgagcg tgtgcgccga catccgccgc
     1741 tccacctgca ggtgctgcag gaaggcctgt accgcgctca tcgtcgtcgt accctgctca
     1801 gcccgcgaag cgcttcaggc cggtgaccag ggcgtcgccc atcatgcgca ggaacaacgt
     1861 gcccatgccc gggtagaagc ggttcgggtc atggctgccg accgcgatca ggcccacacc
     1921 gggcagcggc agcagtgcgg tggtctgcac ttcctcgctg cgcacgccat acagcacggc
     1981 attcttttcc ggctgcaggc ggccgcagat cggctcgcca tccttcaggc aatcgcggaa
     2041 cggacccagc tgcggatcat cggcggcgat cacctgcagc cagtcggcct gttccagtcc
     2101 ggccaccggc gtgtgcacca ccagccgcac cagatcgccg gcgaagtctt cctgcaatga
     2161 agcggccatc gcgcgcaggg tgtctgcggc gttgtcctgc ttcatcagcg ccagggtcag
     2221 ctggtgcgtg cgcaccgcca ggcgttcatt gacttgggcg gtcgcgccca ggtcggccaa
     2281 ccgtcgtgcc agctcgcggt tcttctcgcg cagcacttcc agctggtagc tggccagcga
     2341 cgcggtcggg ccgtcgtcac gcggcaccac cagggtcagg gccaggtccg ggaactgctt
     2401 gaggaagccc ggatgccgcc gcaaccaggc agcgacttca tgggccccga gcttgtcgac
     2461 ggtttcggtc atgcgatcca ctccccttcg aagacgaatg cggtcgggcc cgccatcacc
     2521 accggctggc cgtcgcccgg ccactggatg cgcaggtcgc ccccaggcag gctgatgcgg
     2581 gcatcgtgct gcaggcggcc gcgctgcatc agggtgacgg cggcggcaca ggcgccactg
     2641 ccgcaggcca gggtttcgcc gacgccacgc tcgaacacgc gcaggcgtgc gtgcgccggg
     2701 cccatcacct gggcaaagcc cacgttcacc gaacgcggga acgacgcatg ctgctgcagc
     2761 agcgaaccga cgcgctcgac cggtgcggca tcgatcaggc ccacttcgat caccgcatgc
     2821 gggttgccca tcgacaccgc ggcaaaccgc acgctctcgc cctgcagcgg cagcaggtat
     2881 tcctcacggg cgtgggcgaa gcccatcaat ggcacgttgg ccggttcgaa tgccggcacg
     2941 cccatggtca ccgcgaactg gccatcgccc agcaccttca cttcatggct ggccagcggg
     3001 ctgtcgatga cgaacgcatc gccctgcgca ctgccctcgc gcaccagcca cgcggcaatg
     3061 cagcgcgcgc cgttgccgca ctgctcggag ttggaaccgt cggcattcca gatccggtac
     3121 gaggccaccg aaccgtccgc acgcggcgct tcgatggtca ggatctgatc acagcccacg
     3181 ccggtatggc gatccgccag gcgcgcggcc agctcgggcg tgggcggcgc ggtgccgtca
     3241 cgcaggtcga tcactacgaa atcattgccc gcgccatgca tcttgctgaa gcgcagggcg
     3301 ctggaaccgg ccttacccat tcccgccgcc cgccttcttc gcgggcgcgg gcgccggcgg
     3361 ggtggtcggt gcggccgggt ccgcggtcgt ggccggagta tcgctgccct gggtctgcgc
     3421 cggggtcgcc tcggtggcgg gttcggcagc cggctcgacg gcttcttcca ccggcaccgg
     3481 cttctgcggc agtaccagcg ggcccttgtt gccgcaggcg gcaaggaaca gcagcgaggc
     3541 cgctgccagc ggaatcagga tgacgtttcg atgggggatc ttcattcccc gagtatagcc
     3601 attggcggct gagcggttgg tgcaggggat cgggttgccg gccagcggcc gacactaccg
     3661 ctccggcggc ggcaacggcc gcgtccacag ccagatcgcc accacggtca tgctgccgat
     3721 cgaaaaccac ttcacccagg cgatcggcac gcaccacagc atgatggcgg cacacaccgc
     3781 catggtgatc gtggccatcc acttgccgta gcggctgacc gcaccatgcg cctgccagtt
     3841 ggcgatggcc gggccgaagc gcggatgctg aatcagccac gtgtgcaggc gttcggaacc
     3901 gcgtgaggcg gcccaggccg agatcaggat gaatacggtg gtcggcagcc ccggcacgaa
     3961 gatgccgacg atgccggtac ccaggctgac gtaggccagc agccaccacg cccagcggaa
     4021 acgcaccacg cgcgggggcg cgggggcatc gcgaggggcg gaagggtcag gcgcgctcat
     4081 ggccgcaagg ataccggttc agggtgccag gcaacgcccg gcaccccgtt gcgatcacgg
     4141 ctggacgatg cccagctgct gcagcacgaa cgcatacgac tcggacagct cgcggtagcg
     4201 ctggaagcgc cccgacttgc cgccgtggcc ggcttccatg ttggtgcgga acaggatcgg
     4261 gtactggccg gtgttgtcgt cacgcagctt ggccacccac ttggccggtt cccagtactg
     4321 cacctgcgaa tcccacaggc cggtgcccac gaacagcgcc ggataggcct gccgcttgac
     4381 gttgtcgtac ggcgagtagg acagcatgta gtcgtagtac ggcttctgtt ccggattgcc
     4441 ccactcgtcg tactcgttgg tggtcagcgg gatggtcggg tcgagcatgg tggtgaccac
     4501 gtcgacgaac ggcacctgcg ccaccatcac ccggtaatcc tgcggcgcct ggttggccac
     4561 cgcgcccatc agcaggccac cggcgctgcc accggaggcg gcgacgcgat ccttcgccgc
     4621 ccagccctgc gccaccaggc cccgggtgac gtcgatgaag tcgttgaagg tgttctgctt
     4681 gtgcagcagc ttgccgttct cgtaccagtc gcggcccatt tcctggccac cgcggatgtg
     4741 ggcgatggca tacaccacgc cacgatcgag caggctcacc gcggtctggt tgaagtacgg
     4801 gtccatcgac atgccgtagc tgccataggc gtactggaac aacgcgcccc tgccgtcctt
     4861 ctggtagccc ttgcggtaga ccagcgacac cggcaccttc acgccatcgc gcgcggtgat
     4921 ccagacgcga tcggtttcat acttcgaggc gtcatagccg atcaccggct gcaccttcag
     4981 ctggcggcgc tcgccggtag cggtgttcag ctcgaacacg gtggtcgggg tggtcatcga
     5041 ggtgtagacg tagcgcagcc acggcgtatc ggcctcggtg ttgtcgccca ggcccatcga
     5101 atacgccggc tcgtcggccc tcacgtaatc gctgcggccg tccttgaaca gcaggcggat
     5161 gcgctccagg ccttcggaac gttctgcgat ggcggtgtag ctgtcgaaca gctcgaagcc
     5221 ttcgatgaac accgcatcgt catgcgcgat ccaatccttc cactgcgcgc gcgaggtggc
     5281 gtcggtcggc gcggtgacca gcttgaaatt cttcgcgcca tcgttggtgc ggatcaccca
     5341 gcggccgtcg tagtgatcgg cgtcgtactc gacgtcgcgc tggcgtggcg ccagcacggt
     5401 gaaggtggtc gggtcgctgg ccggcgcgta gcgctcttcc gaggacacgg tgctgtgtac
     5461 gccgatggtg atgaagcgat cgtcgcgggt gcggccgatg cccatgtaga agctgtcgtc
     5521 cttctcttcg tagacgacgg tgtcggcgct ggccggggtg cccagcacgt gcttcttgac
     5581 gcgcacggtc agcagggttt ccggatcgtt ctcgacgtac agcacggtgc ggttgtcgtc
     5641 ggcccagacc aggtcaccgg agctgccggt gatcacatcg ggcagcacct ggccggtgcg
     5701 caggtccttg aagcggatcg tgtactggcg acggccgacg tcgtcgtcgg cccaggccag
     5761 cagctggttg tcctggctca cttccatcga accgacgctg aagtagccct tgccggccgc
     5821 catcgtgttg acgtccagca ggacttcctc ggccgcatcc atgccaccct tgcggcgcgc
     5881 atggatcgga tagtcctggc cggtctcgaa gcggctgtag taccagtagc cgcgctcgcg
     5941 cgccggcacg ctggaatcgt cctgcttgat gcggccgacg atctccttgt acagggtgtc
     6001 ttccagcggc ttcagcggtg ccagcagctg gtcggcgtag gcattctcgg cctgcaggta
     6061 ggccagcatg tccttgttct cgcgcttgtc gtcgcgcagc cagtagtagt cgtcgttgcg
     6121 ggtcgcgccg aacggcgcct tgaccacgtg cggatgcttg gcggcatccg gcggaacggg
     6181 cggagtggca gcggtagcgg tggtggtcat caggctggca agcaacaggc agagggtgga
     6241 tttcatgaga taaggctcca ggtgcggtta cgcaatggcg
//
LOCUS       DAOKIP010000223         6141 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.224,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000223 DAOKIP010000000
VERSION     DAOKIP010000223.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 6141)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6141)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6141
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.224"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(10..717)
                     /locus_tag="QEL58_003473"
     CDS             complement(10..717)
                     /locus_tag="QEL58_003473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2OG-Fe(II) oxygenase"
                     /protein_id="HDS1677906.1"
                     /translation="MHEQGPVDFIEVIHNAVPSDVCTAIVERMRATRGLLPGAVGSGV
                     FPELKHSKDLRISGLDGWQDVDQQLQIAVFNGLLTYLRRYPQALIAPLMLQIQDSNGQ
                     PRRLSAEDFPDMPQQQLADLARTCLRPGAINLQWYAAGEGGYPYWHCELYPKDAQAET
                     LHRHVLWTLYLNDDFEEGETEFLFQGRKIAPRTGSLLIAPTAFTHTHRGNRPQGGDKF
                     IATSWILFQSAQKLFGA"
     gene            complement(825..1841)
                     /locus_tag="QEL58_003474"
     CDS             complement(825..1841)
                     /locus_tag="QEL58_003474"
                     /EC_number="3.1.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014035428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class 1 fructose-bisphosphatase"
                     /protein_id="HDS1677907.1"
                     /translation="MSRTSLTRFLIQEQHAGRINADLRQLIAVVARACTSISIAVSKG
                     ALGGVLGEAGTGNVQGEAQKKLDVISNEILLEANAWGGHLAACASEEMDHSQPVPDIY
                     PRGDFLLLFDPLDGSSNIDVNVSVGTIFSVLRCPTNVELPGDDAFLQPGSKQIAAGYC
                     IYGPSTQLVLTVGHGTHAFTLDREKGEFVLTTENMQIPAATQEFAINMSNQRHWEAPM
                     QAYVGDLLAGKEGARGKNFNMRWIASMVADVHRILTRGGIFIYPWDNKDPSKAGKLRL
                     MYEANPMGLLVEQAGGAASTGRERILDIQPDQLHQRVPVFLGSREEVAEAVRYHHAHD
                     GAQG"
     gene            complement(2193..3395)
                     /locus_tag="QEL58_003475"
     CDS             complement(2193..3395)
                     /locus_tag="QEL58_003475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019658816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate/tyrosine/aromatic aminotransferase"
                     /protein_id="HDS1677908.1"
                     /translation="MSFFANVELVPGDPILGLTEAYNADSRPTKVNLGVGIYYDESGR
                     IPLLRAVKQIEQQLAAEAKPRGYLPIDGLPAYTQATRELVFGKDSPLLAAGRVTTAQT
                     VGGSGALRVGADVLKKLLPHATVALSNPSWENHRAVFSAAGFEVVDYTYFDPTTHGVD
                     FDGMLADLGKLQAGTVVLLHACCHNPTGADLTVTQWKQVAQLLKDKQLFPFIDMAYQG
                     FDKGIEQDGAAVRIIAEAGIDSFIVANSYSKSFSLYGERVGALSMVAPTAADAKAVQS
                     QVKRVIRTIYSSPSTHGAALVAGVLTNPDLRAMWEQELTEMRERIHALRHGLVEKLAA
                     AGAPQFGFINEQAGMFSYSGLSREQVERLRDEFGIYAVGTGRICVAALNQNNLEYVAK
                     AVATVAKG"
     gene            3567..5657
                     /locus_tag="QEL58_003476"
     CDS             3567..5657
                     /locus_tag="QEL58_003476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005411771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDS1677909.1"
                     /translation="MNPAARRHCLPLSALLLSPFASMAEPAPTALPAVQVQAARVPGI
                     DPFALPASLDTVWIDARRAGAGAQLSEALAGVPGLVARDRQNFAQDTQLSIRGFGARS
                     TFGVRGVRVLIDGVPATMPDGQGQLSHASLLGAERIDVLRGPFSALYGNSSGGVLQVW
                     SAQGQAGDPWRLRLNAGADNTLSVGAQLKGAGHGLDYNIAANHFRTDGWRDHSRARRE
                     SLNARIGGELGGGRLELLLNALDAPDAQDPLGLTRAQVAADPRQATAVAHQYNTRKSV
                     RQQQAGLRWTREAGAQRWQLMGYAGQRAVRQYLPIPPAAQANPLHAGGVIDLDGGYGG
                     LDARWGWHGDLAGRPLDLVAGLSADRQRQHRTGYENFIGSTLGVRGQLRRDQIDVVQN
                     VDQFAQAWWQWSPRWSLLAGVRHSSVRFESDDRYITGRNPDDSGRRRYQATTPVAGIS
                     FEASPQWRLHAAVGRGFETPTFNELGYRADGQAGLALDLAAARSRSVEVGSKWHAQDG
                     TQLDVSLFRADTDDELAVASNIGGRSTYRNIGRTRRQGLELQYRQPLAEQLELQLAWT
                     WLQAQVRSPYLTSNTVVTTGSRLPGVPRQQAFARLQWTPGDWQWALEANASSDTVVND
                     VATERAPGFALLHLEGGRRWTLPGGELRAFARLENVLDQAYIGSVIVNDGNGRFYEPG
                     PGRRSSVGLQWSWR"
     gene            complement(5688..6032)
                     /locus_tag="QEL58_003477"
     CDS             complement(5688..6032)
                     /locus_tag="QEL58_003477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005411772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677910.1"
                     /translation="MSRETSRDPLRENHPPIAGEQRGKRDADTADYRGTGAPFFDAAQ
                     GDEHLPVKHEAEQAAQDRKDGGDRHRGGQESPLKRRERKQRASDNQDEALEETFPASD
                     PTSPFVPAKAPD"
BASE COUNT          921 a         2025 c         2168 g         1027 t
ORIGIN      
        1 agctcgacgc tacgccccaa acaacttctg cgcgctctgg aacaggatcc agctggtggc
       61 gatgaacttg tcgccgccct gcggccggtt gccacgatgg gtgtgggtga acgcggtcgg
      121 ggctatcagc aggctgccgg tgcgtggcgc gatcttgcgg ccctggaaca ggaactcggt
      181 ttcgccttcc tcgaagtcat cgttgaggta cagcgtccac aacacgtgcc ggtgcagggt
      241 ctcggcctgg gcatccttcg ggtacagctc gcagtgccag tacggatagc cgccctcgcc
      301 cgccgcgtac cactgcaggt tgatcgcacc cgggcgcagg caggtgcggg ccaggtcggc
      361 cagctgctgc tgcggcatgt cggggaagtc ctcggcagac aggcgtcgcg gctggccatt
      421 gctgtcctgg atctgcaaca tcagcggagc gatcaacgcc tgtggataac ggcgtagata
      481 agtcagcagg ccgttgaaca ccgcgatctg cagctgctgg tcgacatcct gccagccgtc
      541 cagtccactg atgcgcagat ccttgctgtg cttgagttcc gggaacacac cactgccgac
      601 cgcaccgggc agcaggccac gcgttgcacg catgcgctcg acgatcgccg tgcagacgtc
      661 gctggggacg gcattgtgga tgacttcgat gaaatcgacc gggccctgct cgtgcatgcg
      721 tgcattcctt aggcggcaat ggctcgatgg tgccgtttgc cgcccgtggt gtcaccccac
      781 ggtcatgtcg tcgatctgcc atgaccgttg tcgggtgacg gccctcagcc ctgcgcgccg
      841 tcgtgcgcgt ggtggtagcg cacggcttcg gccacttcct cgcgcgagcc gaggaacacc
      901 ggcacgcgct ggtgcagctg gtcgggctgg atatcgagga tgcgctcgcg gccggtcgag
      961 gcggcgccac cggcctgctc gaccagcagg cccatcgggt tggcttcgta catcaggcgc
     1021 agcttgccgg ccttggacgg gtccttgttg tcccacgggt agatgaagat gccgccgcgg
     1081 gtcaggatgc gatgcacgtc ggcgaccatg ctggcgatcc agcgcatgtt gaagttcttg
     1141 ccgcgtgcgc cttccttgcc ggccagcagg tcgccgacgt aggcctgcat cggcgcttcc
     1201 caatgccgct ggttggacat gttgatggcg aattcctggg tggccgccgg gatctgcatg
     1261 ttctcggtgg tcagcacgaa ctcgcccttc tcgcggtcca gggtgaaagc gtgggtgcca
     1321 tggccgacgg tcagcaccag ctgggtgctg ggcccgtaga tgcagtagcc ggcggcgatc
     1381 tgcttgctgc ccggctgcag gaacgcgtca tcgcccggca gttccacgtt ggtcgggcag
     1441 cgcagcaccg agaagatggt gccgaccgag acgttgacgt cgatgttgga gctgccatcg
     1501 aggggatcga acagcagcag gaaatcgccg cgcggataga tgtccggcac cggctggctg
     1561 tggtccattt cttccgaggc gcaggcggcg aggtggccac cccaggcgtt ggcttcgagc
     1621 aggatctcgt tgctgatgac gtccagcttc ttctgcgctt cgccctgcac gttgccggta
     1681 ccggcctcgc ccagcacgcc gccgagggcg cctttgctga cggcgatgga gatgctggtg
     1741 caggcgcggg cgacgaccgc gatcagctgg cgcaggtcgg cattgatgcg gccggcgtgc
     1801 tgttcctgga tcaggaagcg ggtcaacgaa gtacgggaca tgagcgggca ggtctcggca
     1861 gcgggaaaac gcctattgtc gccggtctgg cgggggcgtg cgtgaccgcg ggaaggcgta
     1921 atcgtttcca gatgcgttgc gctggtggcg ccttccttca tggaggcaca gggcgaggta
     1981 caccgtggcc aggacacgcc gtaaacccat ccatgggggc tcggtcggcg catccatgcg
     2041 cctcacggtc ctgtccacgg tgtacctcgc cctgcgcttc agggttcgcc gcgagcgcgg
     2101 agggtgtggc aaaggcagag gcaaagcaga agcaaaaaca aaaacgaagg cgcctttcgg
     2161 cgcctttgtt ttcaagcacg tgcaacgttg tttcagccct tggcgacggt ggccacggcc
     2221 ttggcgacgt attccaggtt gttctggttc agtgcggcca cgcagatgcg gccggtgccg
     2281 acggcgtaga tgccgaactc gtcgcgcagg cgttcgacct gctcacggct caggccggag
     2341 taggagaaca tgccggcctg ctcgttgatg aagccgaact gcggcgcacc ggcagcggcc
     2401 agcttctcga ccaggccgtg gcgcagggca tggatgcgct cgcgcatctc ggtcagctcc
     2461 tgctcccaca tcgcgcgcag gtccgggttg gtcagcacgc cggccaccag cgcggcaccg
     2521 tgggtggacg ggctggagta gatcgtgcgg atcacgcgct tgacctgcga ctgcacggcc
     2581 ttggcgtccg cggcggtcgg ggcgaccatc gacagcgcac ccacgcgctc gccgtacagc
     2641 gagaacgact tggagtacga gttggcgacg atgaagctgt cgatgccggc ttcggcgatg
     2701 atgcgcacgg cggcgccgtc ctgctcgatg cccttgtcga agccctggta ggccatgtcg
     2761 atgaagggga acagctgctt gtccttcagc agctgcgcga cctgcttcca ctgggtgacg
     2821 gtgaggtcgg cgccggtggg gttgtggcag caggcgtgca gcagcaccac ggtgccggcc
     2881 tgcagcttgc ccaggtcggc cagcatgccg tcgaaatcga cgccatgggt ggttgggtcg
     2941 aagtaggtgt aatccaccac ctcgaagccg gccgcgctga acacggcgcg gtggttttcc
     3001 cagctcgggt tgctcagcgc gacggtggcg tgcggcagca gcttcttcag cacgtcggcg
     3061 ccgacgcgca gcgcaccgct gccaccgacg gtctgtgcgg tggtgacgcg gccggcggcc
     3121 agcagcggcg agtccttgcc gaacaccagt tcgcgcgtgg cctgcgtgta cgccggcagg
     3181 ccatcgatcg gcaggtagcc gcgcggtttg gcttcagcgg cgagctgctg ctcgatctgc
     3241 ttgacggcgc gcagcagcgg aatgcggcca ctctcgtcgt agtagatgcc cacacccagg
     3301 ttgaccttgg tcgggcggct gtcggcgttg tacgcctcgg tcaggcccag gatcgggtcg
     3361 cctgggacca gttccacgtt tgcaaagaag gacacggcgg tactcgttcg gtagacggaa
     3421 agggggagga attgcgccac gcggcttgcg gctttccagc cggaaacagc ccatcgtaac
     3481 aaagcctgcc ggggctggcc gccgccatcg tcatccccgg gcccgtacca tggcgtgcgt
     3541 tgccgcccga tccatcaacc tgaatcatga atcccgccgc acgacgccat tgcctgccgc
     3601 tgtccgccct gctgctgtcg ccatttgcca gcatggccga gcctgccccc accgccctgc
     3661 ccgccgtgca ggtgcaggcc gcacgcgtac ccggcatcga cccgttcgcc ctgccggcca
     3721 gcctggacac ggtctggatc gacgcccgcc gcgccggggc cggggcgcag ctgtccgaag
     3781 cactggccgg ggtgccgggc ctggtcgcgc gcgaccggca gaacttcgcg caggacacgc
     3841 agctgtcgat ccggggcttc ggcgcgcgct cgaccttcgg tgtgcgcggg gtgcgggtgc
     3901 tgatcgacgg cgtaccggcg accatgcccg acggccaggg tcagttgtcg catgccagcc
     3961 tgctcggcgc cgagcgcatc gacgtgctgc gtgggccgtt ctcggcgctg tatggcaact
     4021 cctccggcgg cgtgctgcag gtgtggagcg cacagggcca ggccggcgac ccgtggcggc
     4081 tgcgcctcaa tgccggcgcc gacaacacgc tcagtgtcgg cgcgcaactg aagggcgcag
     4141 gccacgggct ggactacaac atcgccgcca accacttccg taccgatggc tggcgtgacc
     4201 acagccgggc gcgccgtgaa tcgctcaacg cgcgcatcgg cggtgagctg ggcggtgggc
     4261 ggctggagct gctgctcaat gcgctggatg cgcccgatgc gcaggatccg ctgggcctga
     4321 cccgcgcgca ggtggcggcg gacccgcgcc aggccaccgc cgtggcacac cagtacaaca
     4381 cccgcaaatc ggtgcgccag cagcaggccg ggctgcgctg gacccgcgag gccggcgcgc
     4441 agcgctggca gctgatgggc tatgccggcc agcgcgcggt gcgtcagtac ctgccgattc
     4501 cgccggcggc ccaggccaat cccctgcatg cgggcggggt gatcgacctg gacggaggct
     4561 acggcgggct ggacgcgcgc tggggctggc acggcgatct cgccggacgg ccgctggacc
     4621 tggtggccgg gctcagcgcc gaccgtcagc gccagcaccg caccggctac gagaacttca
     4681 tcggcagcac gctgggcgta cgcgggcagc tgcgccgcga ccagatcgac gtcgtgcaga
     4741 acgtggacca gttcgcgcag gcctggtggc aatggagccc gcgctggtcg ttgctggcgg
     4801 gcgtgcgcca cagcagcgtg cgcttcgaat cggacgatcg ctacatcacc ggccgcaacc
     4861 cggacgacag cggccgccgt cgctaccagg cgaccacccc ggtggccggc atcagcttcg
     4921 aggccagccc gcagtggcgc ctgcacgctg ccgttggccg cggcttcgag acgcctacct
     4981 tcaacgaact gggttaccgc gccgacggtc aggcgggact ggcactggat cttgccgccg
     5041 cgcgcagccg ctccgtggaa gtgggcagca agtggcacgc acaggatgga acccagcttg
     5101 atgtcagcct gttccgtgca gataccgacg atgagctggc tgttgccagc aatatcggcg
     5161 gacgcagcac ctatcgcaac attggccgta cccgtcgcca ggggctggaa ctgcagtacc
     5221 gccagccgct ggccgagcag ctggaactgc agctggcctg gacctggctg caggcgcagg
     5281 tgcgctcgcc ctacctgacc tccaataccg tggttaccac cggcagccgc ctgcccggcg
     5341 tgccgcgcca gcaggcgttc gcccggctgc agtggacgcc gggcgactgg cagtgggcgc
     5401 tggaagccaa tgccagcagc gacacggtgg tgaacgacgt ggccaccgag cgagcgccag
     5461 gcttcgccct gctgcatctg gaaggtggcc gccgctggac cctgcccggc ggcgagctgc
     5521 gtgccttcgc ccggctggag aacgtgctgg accaggccta catcggctcg gtgatcgtca
     5581 acgacggcaa cggccgcttc tacgagccgg gaccggggcg gcggtccagc gtgggactgc
     5641 agtggtcgtg gcgctaggcg ggtcgtggca ctgggcggca cgacccgtca atcaggcgcc
     5701 ttggccggca cgaacggtga ggtcgggtcg ctggccggga aggtttcctc cagtgcctcg
     5761 tcctggttgt cgctggcccg ctgcttgcgc tcgcgacgct tgagcgggct ttcctggccg
     5821 ccgcgatggc ggtcgccgcc gtccttgcgg tcctgggccg cctgttcagc ctcatgcttc
     5881 accggcaggt gctcgtcgcc ctgcgcggca tcgaagaagg gggccccggt accgcggtag
     5941 tcggcagtgt cggcgtcgcg cttgccacgc tgctcgccgg caatgggcgg gtggttttcc
     6001 cgcagcgggt ctcgggaggt ttcacggctc atggtctggc tacctgcgct cggggcctcc
     6061 actacaccgc cagcaaggta aagccgccgc gaacctggcg tcatgaacat ctcgctcacc
     6121 cgctggtaac ggcaccgcgc g
//
LOCUS       DAOKIP010000224         6078 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.225,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000224 DAOKIP010000000
VERSION     DAOKIP010000224.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 6078)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6078)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6078
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.225"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..609)
                     /locus_tag="QEL58_003478"
     CDS             complement(<1..609)
                     /locus_tag="QEL58_003478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003486759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L25/general stress protein
                     Ctc"
                     /protein_id="HDS1677911.1"
                     /translation="MSKTHEIKVTKRELQRKGASRRLRHAGVIPAIVYGGNAEPVAIS
                     LDHNEIWLAQQNEWFYASILDLNLDGQVQKVLLRDMQRHPYKQLIMHLDFQRVNENEA
                     LTASVPLHFINEDTSPAGKAADVVVTHELKEVTISCLPKDLPESIEVDLADLAAGDVV
                     YLSNIKLPKGVEIPALALGKDHDDAIVTAKHGKEDAADAEAPA"
     gene            complement(720..1679)
                     /locus_tag="QEL58_003479"
     CDS             complement(720..1679)
                     /locus_tag="QEL58_003479"
                     /EC_number="2.7.6.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003486761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-phosphate diphosphokinase"
                     /protein_id="HDS1677912.1"
                     /translation="MQESPNLLVFSGNANKRLAQNICKELGVRPGKALVSHFSDGEVQ
                     VEIEENVRKQDVFVIQPTCAPSAENLMELLVLIDALKRASVASVTAVVPYFGYSRQDR
                     RMRSSRVPITAKLAAKMFSTAGADRVLTVDLHADQIQGFFDIPVDNVYASPLLLADIW
                     RAYGTENLIVVSPDVGGVVRARAVAKRLDDADLAIIDKRRPRANVSTVMNIIGDVEGK
                     TCVMVDDIVDTAGTLCAAAAALKARGALKVAAYCTHAVLSGPAVDNITNSQLDELVVT
                     DTIPLKDAARVCSKIRQLSVAEMLAETMRRIAFGESVSSLYVD"
     gene            complement(1820..1896)
                     /locus_tag="QEL58_003480"
     tRNA            complement(1820..1896)
                     /locus_tag="QEL58_003480"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1860..1862),aa:Gln,seq:ttg)
     gene            complement(1908..2777)
                     /gene="ispE"
                     /locus_tag="QEL58_003481"
     CDS             complement(1908..2777)
                     /gene="ispE"
                     /locus_tag="QEL58_003481"
                     /EC_number="2.7.1.148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010481746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase"
                     /protein_id="HDS1677913.1"
                     /translation="MNGAADDAGWSWWPAPAKLNLFLHITGRRADGYHELQTVFRLLD
                     WGDRIGLRLREDGQVRRQGGGLAGVAEADDLAVRAARLLKDAANVAQGADIIVEKHVS
                     AGGGFGGGSSDAATVLVVLNRLWQAGLDEDALAALGLRLGADVPVFVRGRNAWAEGVG
                     ERLQPITLAPAWYVVVEPGVHVPTPALFADPDLTRDSPVAKIEDFASGTLVGNAFEPV
                     LRRREPAVEAALAALSGIGSARLTGSGSGCFVEFASQTAAEQGRSKLPKELRARVAAG
                     VARSPLLDALEQH"
     gene            complement(2774..3433)
                     /gene="lolB"
                     /locus_tag="QEL58_003482"
     CDS             complement(2774..3433)
                     /gene="lolB"
                     /locus_tag="QEL58_003482"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005412332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein localization protein LolB"
                     /protein_id="HDS1677914.1"
                     /translation="MSVPFIRPLLLAAVTLAVSACTTVGTQKTAAPAVVETVSAEAAQ
                     AEAARVAALQAQPDWAFQGRVAVSKGKDGGSGRIDWKQDGRRYVVELSAPVTRQSWKL
                     TGDTHSEAGRLEGLAGGPRDGEDAQQLLLEATGWDIPVNQLPDWIRGLVAGDAAGPEK
                     VERDGQGRPRRMQQMGWQVQYLDWYPAEGGRPALPRRIEAGNGDAKVRLLVDQWGQGA
                     P"
     gene            complement(3430..5115)
                     /locus_tag="QEL58_003483"
     CDS             complement(3430..5115)
                     /locus_tag="QEL58_003483"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009607258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HDS1677915.1"
                     /translation="MPALIRIPSVLLLSLACGQALAAVPAKAPVRAAATEELALEPVM
                     AGEFALQAGKLAEAARGYLQAAQQTDGDAGLAERATRISMLANDDASAAKGLALWQQR
                     APSSLTMRSAAGALAMRQGDVKAARAELQALLADPDERGWKFALAALIGGGRDPAVPA
                     QVLGELVDANAIPPKIEAWQEFGRLALRMDKPELARRMIDEVVKRFPEEPRVALLRAS
                     QLQQAGETDKALSLLHDVEPKTRQDPELRNAVAIAYDSLGQPSAAERVLAFGPQDVQT
                     WGMRASLLAKQGDKAALSNLYNELSRQAAKPDPAQRLLLGKIAEYLKRYPEAVQWYHS
                     VPGGDELSEARLRAANAQALAGRLPLALDEVHAIQSDAVVDDDVRRDAYLLEAELRQR
                     ADDSAGELDALARGLAAYPDDNGLLYARALTWERRDDIPRAEADLRKILVTDPENVPA
                     LNALGYTLADRTGRLQEALELIDRARVAEPDNAAIVDSYGWVLYRLGRKEEALVQLRR
                     AWTLAKDPEIAAHVGEVLWVLGKHDEARHFFEEAAKLDPENRALLRAREKFNP"
     gene            5179..>6078
                     /locus_tag="QEL58_003484"
     CDS             5179..>6078
                     /locus_tag="QEL58_003484"
                     /EC_number="1.2.1.70"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006450610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamyl-tRNA reductase"
                     /protein_id="HDS1677916.1"
                     /translation="MTLWVLGLNHQTAPVELRERAAFAGEALPRALGSLRDTPQIAEA
                     VLLSTCNRTELYAVADSAQALDQWLHAQAGDLQGYLYQHADADAVRHLFRVATGLDSM
                     VLGEPQILGQVKDAWSTARDHGLLGQRLDRLFQQTFSVAKRARTDTQVGANPVSVASA
                     AVRLAQNAFARLDDSTVLLVGAGETIELAARHLSEGKVRRLLIANRTLAHAQELATRH
                     GGVALPLTELDRHLGEADVVFSATAAREPVIHREMVAKALRARRHKPMLLFDLAVPRD
                     IEAEVGTLNDAFLYTVDDLERAVE"
BASE COUNT          930 a         2146 c         2009 g          993 t
ORIGIN      
        1 agccggagct tcagcgtcgg cagcgtcttc cttgccgtgc ttggcggtga cgatcgcgtc
       61 gtcgtggtcc ttgcccagcg ccagggccgg gatttccacg cccttcggca gcttgatgtt
      121 ggacaggtac accacgtcgc cagcggccag gtcggccagg tcgacttcga tcgactccgg
      181 caggtccttc ggcaggcagc tgatggtcac ttccttcagt tcgtgggtga ccacgacgtc
      241 ggcagccttg ccggccggcg aggtgtcttc gttgatgaag tgcagcggga ccgaagcggt
      301 cagggcttcg ttctcgttca cgcgctggaa gtccaggtgc atgatcagct gcttgtacgg
      361 gtggcgctgc atgtcacgca gcaggacctt ctgcacctgg ccgtccaggt tcaggtccag
      421 gatcgaggca tagaaccact cgttctgctg ggccagccag atttcgttgt ggtccaggct
      481 gatggcgacc ggctcggcgt tgccgccgta cacgatggcc gggatcacac cggcgtgacg
      541 caggcggcgg ctcgcaccct tacgctgcag ttcacgcttg gtgaccttga tttcatgggt
      601 cttcgacatt ttcgactact caggttgttg ccgcgccttg cggcgtggcg gttgaagatg
      661 cttccgcgac cagaagcatc cgggacatgc ccccaccgtt gccggcaggg gcgaaaaact
      721 caatcgacgt acagcgagct gaccgactcg ccgaaggcga tgcggcgcat cgtttcggcc
      781 agcatttccg ccacgctcag ctggcggatc ttgctgcaca cccgcgcggc gtccttcagc
      841 gggatggtgt cggtcaccac cagctcgtcg agctgggaat tggtgatgtt gtccaccgcc
      901 gggccggaca gcaccgcgtg ggtgcagtag gcggcgacct tgagcgcacc gcgcgccttg
      961 agggcagcgg cagcggcgca cagggtgccg gcggtatcga cgatgtcatc gaccatcacg
     1021 caggtcttgc cttcgacgtc accgatgatg ttcatcacgg tggagacgtt ggcgcgcgga
     1081 cggcgcttgt cgatgatcgc caggtcggcg tcatccaggc gcttggccac cgcacgggcg
     1141 cggaccacgc cgcccacgtc cggcgagacg acgatcaggt tctcggtgcc gtaggcgcgc
     1201 cagatgtcgg ccagcagcag cggagaggcg tacacgttgt cgaccggaat atcgaagaaa
     1261 ccctggatct ggtcggcgtg caggtcgacg gtcagcacgc gatcagcgcc agcggtgctg
     1321 aacatcttgg ccgccagctt ggcggtgatc ggcacgcgcg aggaacgcat gcggcgatcc
     1381 tggcgcgagt agccgaagta cggcaccacg gcggttacgc tggccaccga tgcgcgcttg
     1441 agcgcgtcga tcagcaccag cagttccatc aggttttccg cgctcggcgc gcaggtcggc
     1501 tggatcacga acacgtcctg cttgcggacg ttctcttcga tctccacctg cacttcacca
     1561 tcggagaagt gcgagaccag cgccttgccc gggcgaaccc ccagttcctt gcagatgttc
     1621 tgcgccagac gtttgttggc gttgccggaa aagaccagca ggttcgggga ctcttgcatc
     1681 atgattgtct cgggcgggga cgagtggcgg ggatccggag tcggcaagga ccctcatgga
     1741 cccttgctgc tgacaacacc gcggttgttt ccacgtcccg cgcaggcgat gcgctggaag
     1801 gcgcggacac agccgctatt ggcaggggcg gtaggattcg aacctacgaa tgccaggatc
     1861 aaaacctggt gccttgggcc tcttggcgac gcccctgcat tgataaatca gtgttgctcg
     1921 agtgcatcca gcagtggcga acgcgcaacg cccgccgcca cccttgcccg caactccttc
     1981 ggcaacttcg accgtccctg ctctgcggca gtctgcgatg cgaactcgac gaaacaacca
     2041 cttcccgaac cggtcagccg cgcggagccg atgccgctca acgctgcgag cgcggcctcg
     2101 acggcaggct cacggcggcg cagcacaggt tcgaacgcgt tcccgaccag ggtcccggaa
     2161 gcgaagtcct ctattttcgc cactgggctg tcgcgcgtca aatccgggtc tgcgaacagg
     2221 gccggcgtgg gaacatgaac gcccggctcg accaccacat accaggccgg agccagcgtg
     2281 atcggctgca gccgctcccc caccccttcg gcccaggcat tgcggccacg cacgaatacc
     2341 ggcacgtcgg cccccaggcg caggcccagc gcggccagcg cgtcttcgtc caggccggcc
     2401 tgccagagcc ggttcaacac gaccagtacg gtggccgcat ccgacgagcc accgccgaaa
     2461 ccgccaccgg cggaaacatg cttttcgacg atgatgtccg cgccttgcgc gacattcgcc
     2521 gcatctttca gcaacctggc ggcacgcacc gccaggtcat cggcctcggc cacgcccgcc
     2581 aggccgccgc cctgccgacg cacctggccg tcttcacgca ggcgcaggcc aatgcggtcc
     2641 ccccagtcca gcaggcggaa cacggtctgc agctcgtggt agccatcagc ccggcggccg
     2701 gtgatgtgca ggaacaggtt cagcttggcc ggggctggcc accaggacca gcccgcgtcg
     2761 tcggctgcac cattcatggt gcgccctgtc cccactggtc caccagcagg cgcaccttgg
     2821 cgtcgccatt gccggcctcg atccggcgcg gcagcgccgg gcgtccgccc tcggccgggt
     2881 accagtccag gtactgcacc tgccagccca tctgctgcat gcggcgcggc cggccttgac
     2941 cgtcacgctc gaccttttcc gggccggcgg catcgccggc caccaggcca cggatccagt
     3001 ccggcaactg gttgaccggg atgtcccagc cggtcgcttc cagcagcagc tgctgggcgt
     3061 cctcgccatc acgcggcccc ccggccagtc cttccaggcg gccggcctcg gaatgggtat
     3121 cgccggtcag cttccagctc tgccgggtca ccggcgcgct cagctcaacc acgtagcggc
     3181 gcccgtcctg cttccagtcg atgcggccgc tgccaccgtc cttgcccttg ctgaccgcga
     3241 cccggccctg gaaagcccag tccggctgcg cctgcagcgc cgccacgcgc gcggcctcgg
     3301 cctgcgccgc ttcggccgac accgtctcga ccacggccgg ggccgccgtc ttctgcgtgc
     3361 ccaccgtcgt gcacgcgctg accgccaggg tcacggccgc caacagcagc ggccggataa
     3421 agggaacact catggattga atttctcgcg ggcgcgcaac agcgcgcggt tttcagggtc
     3481 gagcttggcc gcttcctcga agaagtggcg ggcctcgtca tgcttgccca gcacccacag
     3541 cacctcaccg acatgggcgg cgatctccgg gtccttggcc agggtccagg cacggcgcag
     3601 ctgcaccagg gcctcttcct tgcggcccag gcgatacagc acccagccgt agctgtcgac
     3661 gatggccgcg ttgtccggct cggccacgcg ggcgcggtcg ataagttcca gcgcctcctg
     3721 cagacgaccg gtacggtcgg ccagggtgta gcccagcgcg ttcagtgccg gcacgttctc
     3781 cgggtcggtc accaggatct tgcgcaggtc agcctcggca cgcggaatgt cgtcacgacg
     3841 ctcccaggtg agcgcacggg cgtacagcag cccgttgtca tccgggtagg cggccaggcc
     3901 gcgggccagc gcgtccagtt caccggcact gtcgtcggcg cgctggcgca gctcggcctc
     3961 cagcaggtag gcatcgcggc gcacatcgtc gtcgaccacg gcgtcggact ggatcgcgtg
     4021 cacttcatcc agcgccagcg gcaggcgccc ggccaacgcc tgcgcattgg ccgcacgcag
     4081 gcgcgcctcg ctcagctcat cgccaccggg cacgctgtga taccactgca ccgcctcggg
     4141 atagcgcttc aggtactcgg cgatcttgcc cagcagcagg cgctgcgccg ggtccggctt
     4201 cgccgcctgc cgcgacagtt cgttgtacag gttggacagc gcggccttgt caccctgctt
     4261 ggccagcagc gaggcgcgca tgccccaggt ctgcacgtct tgcgggccga acgccagcac
     4321 gcgctcggcc gcggacggct ggccgaggct gtcgtaggcg atggccaccg cgttgcgcag
     4381 ttccgggtcc tggcgggtct tcggctcgac gtcgtgcagc agcgacaacg ccttgtcggt
     4441 ctcgccggcc tgctgcagct ggctggcgcg cagcagcgcc acgcgcggct cctcggggaa
     4501 ccgcttgacc acttcgtcga tcatgcgccg cgccagctcg ggcttgtcca tgcgcagggc
     4561 caggcggcca aattcctgcc aggcctcgat cttcggcgga atggcgttgg catcgaccag
     4621 ctcccccagc acctgcgccg gcaccgccgg atcgcggcca ccgccgatca gcgcggccag
     4681 ggcgaacttc cagccacgtt catcagggtc ggccagcagg gcctgcaact cggcgcgggc
     4741 ggccttcaca tcgccctggc gcatggccag cgcaccggcg gcactgcgca tggtcagcga
     4801 gctgggcgcg cgctgctgcc acagggccag gcccttggcg gcgctggcat cgtcgttggc
     4861 gagcatggaa atgcgggtgg cacgctcggc caggccggca tcgccgtcgg tctgctgggc
     4921 cgcctgcagg tatccgcgtg cggcctcggc cagcttgccg gcctgcagcg cgaactcacc
     4981 ggccatcacc ggttccagcg ccagttcctc agtggccgcg gcccgtacgg gggccttggc
     5041 cggcaccgcc gccagggcct ggccgcaggc cagggacagc agcagaacac tggggatgcg
     5101 aatcaatgcg ggcatcgtcg gcatcggggc cttaaaatgt cgtccaatgg ccagcagctt
     5161 atcgcaagca actgaacaat gaccctgtgg gtgctcggac tgaatcacca gaccgcaccg
     5221 gtagagctgc gcgagcgcgc ggccttcgcc ggtgaggcgt tgccgcgcgc gctcggttcg
     5281 ctgcgcgata ccccgcagat cgccgaggca gtgctgctgt ccacctgcaa ccgcaccgag
     5341 ctgtacgccg tggccgattc ggcgcaggcg ctggaccagt ggctgcatgc ccaggccggc
     5401 gacctgcagg gttacctgta ccagcatgcc gacgccgatg cggtgcgcca cctgttccgg
     5461 gttgccaccg ggctggattc gatggtgctg ggcgaaccac agatcctggg ccaggtgaag
     5521 gatgcctggt cgaccgcgcg tgaccacggc ctgctcggcc agcgcctgga ccgtctgttc
     5581 cagcagacct tctcggtggc caagcgcgcc cgcaccgata cccaggtcgg cgccaacccg
     5641 gtgtcggtgg cgtcggctgc ggtgcgcctg gcgcagaacg cgttcgcgcg cctggacgat
     5701 tccaccgtgc tgctggtcgg tgccggcgag accatcgaac tggccgcgcg gcacctgagc
     5761 gagggcaagg tacggcggct gctgatcgcc aaccgcaccc tcgcccacgc gcaggaactg
     5821 gccacccgcc atggcggggt ggccctgccg ctgaccgaac tggaccgcca tctgggcgag
     5881 gccgatgtgg tgttctcggc caccgccgca cgcgaaccgg tgatccatcg cgagatggtg
     5941 gccaaggccc tgcgcgcgcg ccggcacaag ccgatgctgc tgttcgacct ggccgtgccg
     6001 cgcgacatcg aggccgaggt cggcacgctc aatgacgcct tcctctacac cgtcgacgac
     6061 ctcgaacgcg cggtggaa
//
LOCUS       DAOKIP010000225         6012 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.226,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000225 DAOKIP010000000
VERSION     DAOKIP010000225.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 6012)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6012)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6012
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.226"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            172..2928
                     /locus_tag="QEL58_003485"
     CDS             172..2928
                     /locus_tag="QEL58_003485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014036297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDS1677917.1"
                     /translation="MLNHKRSALSLALAVVLAPTLASAQSTQNTTTSEGTAATNLDTV
                     QVTGIRRGIESAIAVKQDATSVVEAISAEDIGKLPDVSIAESISRLPGLAAQRVAGRA
                     QVISVRGLSPDFATTLLNGREVVSTGDNRGVEFDQYPSELVNGVTVYKTPDAALVGQG
                     LSGTIDMQTARPLSFGERVIAVSGRYQKSSLGRAANVDPYGNRFSASYIDQFLDKTLG
                     IAIGYAHSDMPIQENQVGLYEPWTTQFTNDGKRPGVTAGTYFSDGIKALRRTGNNKRD
                     GVMATIQFRPNNSWTSTFDAFHTEAEQIDTANQFELNLSNYNGNYLPGLLISNPQINA
                     NGSFTGGTASGVYPLVRGMYNKRKDKIDAFGWNNEFNFSGVKLVADLNYSKATRDELN
                     LENNLQLTPMPQLDTVGVSIRQNGFSQISPGLNYSNPDALFLTNTIYGSGYGKVPKVE
                     DRLKGGKLAATIALPDAIASWAPDIDIGVNYADRRKVKTQSEGNILLGAQGDANIASD
                     LQYRPVNLGFAGIGYIPSWNVPAAVGRYMTFNPVDNLDYLIPKSWTVQEKITTAWARL
                     NINTDIGEVGVRGNIGVQMQHTDQSSDSRYWDNSQPAGSNIQPYSAGRKYNDWLPSLN
                     LAFMFPHQQTLRFAAAKQVARPRVDQMRAGLEFGVDTSNGRPGGSGGNPLLDPWRATA
                     LDLSYEKYFGEKAYVAAAIFYKDLKSYVYTQSVDNYDFSGLLGNYVPPPGMIAPVQTV
                     GTFSTPQNGKGGTLKGLELTASFPLDMLTDNLRGFGVQASATFNKSDITILDPESASS
                     VGSDPISLPGLSKRVYNFTAYYERSGFEARVSQRRRSDFIGEIGNFNGNRTLRYVVGE
                     NVTDAQVSYTFSDSSALRGLTLLLQGSNLTNEPYRTYAGSKDRPLEYIEWGRTYMLGV
                     NYKF"
     gene            complement(3194..4807)
                     /locus_tag="QEL58_003486"
     CDS             complement(3194..4807)
                     /locus_tag="QEL58_003486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005412544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha glucosidase"
                     /protein_id="HDS1677918.1"
                     /translation="MSHYPWWRGAVIYQIYPRSYLDANGDGVGDLPGIIERLDHIATL
                     GVDAIWISPFFKSPMADFGYDIADYRDVDPLFGRLDDFDRLLAKAHGLGLKVMIDQVL
                     SHTSIEHAWFRESRQDRSNPKADWYVWADPREDGTPPNNWLSLFGGGAWQWEPRREQY
                     YLHNFLVDQPDLNFHHPDVQQATLDNVRFWLDRGVDGFRLDAINFCFHDAQLRDNPPK
                     PADKRVGRGFSPDNPYAYQYHYFNNTQPENLPFLERLRALLDAYPGAVSLGEISSEDS
                     LATTAEYTRDGRLHMGYSFELLVDDYSAAYIRDTVSRLEAVMTEGWPCWAVSNHDVER
                     AVSRWGGHPADPRLARMLVAMLCSLRGSVCLYQGEELGLAEAEVPFEALQDPYGITFW
                     PNFKGRDGCRTPLPWTDAPLAGFTSGQPWLPIPAEHRAASVAVQERDPHSVLAAFRAF
                     LAWRRGQPALLHGSIRFIESAEPVLLFERMLADETLLLAFNLSAEAVSHPLPPGNWQQ
                     VAVPGPDAGTVQGNELQLPPRAVYCARRS"
     gene            5022..>6012
                     /locus_tag="QEL58_003487"
     CDS             5022..>6012
                     /locus_tag="QEL58_003487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007966188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HDS1677919.1"
                     /translation="MTITEDTRPALGLPQIQSLAAADMAAVDALIRRRLSSDVVLINQ
                     IADHIISAGGKRLRPMLVMLAGHAVGHAGPDHHQLAAIIEFIHTSTLLHDDVVDESNL
                     RRGRSTANALWGNAPSVLVGDFLYSRSFQLMVELERMPVMQILADATNRIAEGEVLQL
                     LHVHNPDTDEAAYLRVIERKTAVLFAAGTRLGALASGVDEATQQALFDYGMHLGYAFQ
                     IADDVLDYSANAEELGKNLGDDLAEGKATLPLIHAMAHSDDATRERLRAIVQDGDASA
                     MPEVLAAIRATGGLEYSRRRAEEYAEAAERALDGLADNDAVAALRGLARYAVQR"
BASE COUNT         1129 a         2073 c         1889 g          921 t
ORIGIN      
        1 gtctgaaagc gattacaccc ctgcaaacgc cattgaatac gtatgcaggg tgattcccgc
       61 gaagaacgcg ctgcctacca tagcggcgac gacagcggcc accgcgtcgc acgtccacgg
      121 tcacaccggg acgtccacga atcgatctgc aacattgcct gggaggggaa aatgttgaac
      181 cacaagcgca gtgcgctgag tctcgcgctg gccgttgtgc tggcgccgac gctggcgtcc
      241 gcacagtcca cgcagaacac caccacgtcg gaaggcaccg ccgccaccaa cctggatacg
      301 gtgcaggtca ccggcatccg ccgcggcatc gagagcgcga tcgcggtcaa gcaggacgcc
      361 acctcggtgg tcgaagcgat ctccgccgaa gacatcggca agctgcccga cgtcagcatc
      421 gccgaatcca tttcgcgcct gcccggcctg gccgcccagc gcgtggccgg ccgtgcgcag
      481 gtgatcagcg tgcgcggcct gtcaccggac ttcgccacca ccctgctcaa cggccgtgaa
      541 gtggtcagca ccggcgacaa ccgcggcgtc gagttcgacc agtacccgtc cgaactggtc
      601 aacggcgtga ccgtgtacaa gaccccggat gccgcgctgg tcggccaagg cctgtcgggc
      661 accatcgaca tgcagaccgc acgcccgctc agcttcggcg aacgcgtgat cgcggtcagt
      721 ggccgctacc agaagagttc gctgggccgc gccgccaacg tcgatccgta cggcaaccgc
      781 ttcagcgcca gctacatcga ccagttcctg gacaagaccc tgggcatcgc catcggctac
      841 gcgcacagcg acatgccgat ccaggaaaac caggtcggtc tgtacgagcc gtggaccacc
      901 cagttcacca atgatggcaa gcgccccggc gttactgcag gcacctactt ctccgatggc
      961 atcaaggcgc tgcgccgcac cggcaacaac aagcgtgacg gcgtgatggc cacgatccag
     1021 ttccggccga acaacagctg gaccagcacc ttcgatgcgt tccacaccga agccgagcag
     1081 attgacaccg ccaaccagtt cgagctcaac ctgagcaact acaacggcaa ctacctgcct
     1141 ggcctgctga tcagcaaccc gcagatcaac gcgaatggct cgttcaccgg cggcaccgcc
     1201 agcggcgtgt acccactggt acgtggcatg tacaacaagc gcaaggacaa gatcgatgcg
     1261 ttcggctgga ataacgagtt caacttcagc ggcgtcaagc tggtcgccga cctgaactac
     1321 tccaaggcca cgcgcgatga gctgaacctg gaaaacaacc tgcagctgac cccgatgccg
     1381 cagctggata cggttggtgt atcgatccgc cagaacggtt tctcgcagat cagcccgggc
     1441 ctgaactact ccaacccgga tgcgttgttc ctgaccaaca ccatctacgg ttccggctac
     1501 ggcaaagttc cgaaggtgga agaccgcctg aagggcggca agctggccgc gacgattgcg
     1561 ctgcccgatg ccatcgcctc atgggccccg gatatcgaca tcggcgtgaa ctacgccgac
     1621 cgccgcaagg tgaagacgca gtccgaaggc aacatcctgc tcggtgcaca gggcgatgcc
     1681 aacatcgcct cggacctgca gtatcgcccg gtcaatctcg gcttcgccgg catcggctac
     1741 atcccatcat ggaatgtgcc ggctgcggtg gggcgctaca tgaccttcaa tccggtcgac
     1801 aatctggact acctgattcc caagtcgtgg acggtacagg aaaagatcac caccgcctgg
     1861 gcgcgcctga acatcaacac cgacatcggc gaagtgggcg tgcgcggcaa catcggcgtg
     1921 cagatgcagc acaccgacca gagctcggac tcgcgctact gggacaactc gcagccggcg
     1981 ggcagcaaca tccagcccta ctccgcaggc cgcaagtaca acgactggct gccgagcttg
     2041 aacctggcct tcatgttccc gcaccagcag acactgcgct tcgccgccgc caagcaggtc
     2101 gcgcgcccgc gcgtggacca gatgcgtgcc ggcctggaat tcggtgtgga taccagcaac
     2161 ggccgccccg gtggcagcgg cggtaatccg ctgctggacc cgtggcgtgc caccgcactg
     2221 gacctgtcct acgagaagta cttcggcgag aaggcctacg tggctgcggc cattttctac
     2281 aaggacctga agagctacgt ctacacccag tcggtggaca actacgactt cagtgggctg
     2341 cttggcaact acgtaccacc gccgggcatg atcgcgccgg tacagaccgt cggcacgttc
     2401 tcgaccccgc agaatggcaa gggcggcacg ttgaagggcc tcgaactgac cgcgtcgttc
     2461 ccgctggaca tgctgaccga caacctgcgc ggcttcggcg tgcaggccag cgcgaccttc
     2521 aacaagagcg acatcaccat tctggatccg gagagcgcat ccagcgtggg ttccgatccg
     2581 atcagcctgc cgggcctgtc caagcgtgtc tacaacttca ccgcctacta cgagcgcagt
     2641 ggctttgaag cacgcgtgag ccagcgccgc cgttcggact tcatcggtga aatcggcaac
     2701 ttcaacggca accgcaccct gcgctacgtg gtgggcgaga acgtgaccga tgcgcaggtg
     2761 agctatacct tcagcgacag cagcgccctg cgtggcctga ccctgctgct gcagggcagc
     2821 aacctgacca acgagccgta ccgcacctat gccggcagca aggaccgccc gctggagtac
     2881 atcgagtggg gccgcaccta catgctcggc gtgaactaca agttctgacc tggccaaggt
     2941 agtgccggcc gctggccggc aacacaaggg gagcaggacc gcaaacccgc tgtgcaggca
     3001 gcgggttttc ttttatatga gtgccggcag ttggtcggca aggcctatcc acgcatggcg
     3061 tggatctacc cagcgacgcc cccatcggta gctccacgcc atgcgtggat gcccttcacc
     3121 gcaatcccac ccacaaaaaa gggacggggc gcttcggccc cgtccccgca agtaccgcca
     3181 ccggagaaaa cggtcagctg cgtcgggcgc aatacaccgc acgcggcggc agctggagtt
     3241 cattgccctg caccgtgcct gcatccgggc ccggcaccgc cacctgctgc cagttgcccg
     3301 gcggcagcgg atggctcacc gcctcggccg acaggttgaa ggccagcagg agggtttcat
     3361 ctgcaagcat acgctcgaac agcagcactg gctcggcact ttcgatgaat cggatgctgc
     3421 cgtgcaggag cgccggctgg ccacgccgcc aggccaggaa ggcccggaac gcggccagca
     3481 ccgagtgcgg gtcgcgctcc tgcaccgcca ccgacgcggc gcggtgctcg gccgggatcg
     3541 gcagccaggg ctggcccgag gtgaaaccgg ccagcggcgc gtcggtccag ggcaacgggg
     3601 tgcggcagcc atcacgcccc ttgaagttgg gccagaaggt gatgccgtag gggtcctgca
     3661 gggcctcgaa cggcacctcg gcctcggcca ggcccagctc ctcgccctgg tacaggcaga
     3721 ccgagccacg cagcgagcac agcatcgcca ccagcatccg cgccaggcgc gggtcggccg
     3781 ggtggccgcc ccagcggctg accgcccgtt ccacgtcgtg attcgaaacc gcccagcacg
     3841 gccagccttc ggtcatcacc gcttccaggc gcgagaccgt gtcgcggatg taggccgcac
     3901 tgtagtcgtc caccagcagc tcgaagctgt aacccatgtg caggcgcccg tcacgggtgt
     3961 actcggcggt ggtcgccagc gagtcctccg aggagatctc gccgaggctg actgcccccg
     4021 ggtacgcgtc cagcagcgcg cgcaggcgtt ccaggaacgg caggttctca ggctgggtgt
     4081 tgttgaagta gtggtactgg taggcgtacg ggttgtccgg gctgaagccg cggcccaccc
     4141 gcttgtcggc gggcttgggc gggttgtcgc gcagctgcgc gtcgtggaag cagaagttga
     4201 tcgcatccag gcggaagccg tccacgccgc gatccagcca gaagcgcacg ttgtccaggg
     4261 tcgcctgctg cacgtccggg tgatggaagt tcaggtccgg ctggtcgacc aggaagttgt
     4321 gcaggtagta ctgctcgcgg cgcggctccc actgccaggc gccgccgccg aacagcgaca
     4381 gccagttgtt gggcggcgtg ccgtcctcgc gcgggtcggc ccagacgtac cagtccgcct
     4441 tggggttgct gcggtcctgg cggctctcgc ggaaccaggc gtgctcgatc gaggtgtggc
     4501 tcagcacctg gtcgatcatc accttcaggc ccaggccatg ggccttggcc agcaggcggt
     4561 cgaagtcgtc caggcggccg aacagcggat cgacgtcgcg gtagtcggcg atgtcatagc
     4621 cgaaatcggc catcggcgac ttgaagaacg gcgagatcca gatcgcgtcc acgcccagcg
     4681 tggcgatgtg gtccagccgc tcgatgatgc ctggcaggtc gccgacccca tcgccgttgg
     4741 catcgaggta gctgcgcggg tagatctggt agatgacggc tccgcgccac catggatagt
     4801 gcgacatcga cagcccccct ccgggcatgc gtgacccgcc ggaagcgggc cgaaatcctg
     4861 ttccggcaag cttagcggtg gcctccacgg catggcgcaa cctgcatacg tattcacgca
     4921 ggcagccggc cgggccggcc caggcctgcc gtccgccccg gtttgcgccc gaattcacag
     4981 ccagcgccta taatcggcgg tgagcctgaa agcctgatcg catgaccatc accgaagaca
     5041 cccgtcccgc cctgggcctg ccccagatcc agtcgcttgc cgcggccgac atggccgccg
     5101 tcgacgccct gatccggcgc cgcctgtcct cggacgtcgt gctgatcaac cagatcgccg
     5161 accacatcat ttccgccggt ggcaaacgcc tgcgcccgat gctggtgatg ctggccggcc
     5221 acgcggtcgg ccacgctggc ccggaccacc accagctggc ggcgatcatc gagttcatcc
     5281 acacctccac cctgctgcat gacgacgtgg tggacgaatc caacctgcgc cgtggccgca
     5341 gcaccgccaa cgcactgtgg ggcaacgcgc cgagcgtgct ggtcggcgac ttcctgtact
     5401 cgcgcagctt ccagctgatg gttgaactgg agcgcatgcc ggtgatgcag atcctggccg
     5461 atgccaccaa ccgcatcgcc gagggtgaag tgctgcagct gctgcacgtg cacaacccag
     5521 ataccgacga agccgcctac ctgcgcgtga tcgagcgcaa gaccgcggtg ctgttcgccg
     5581 ccggcacccg cctgggcgcg ctggccagcg gcgtggatga agccacccag caggccctgt
     5641 tcgactacgg catgcacctg ggctacgcgt tccagatcgc cgacgacgtg ctggactact
     5701 cggccaacgc cgaggaactg ggcaagaacc tgggcgacga cctcgccgag ggcaaggcca
     5761 cgctgccact gatccacgcc atggcccact ccgatgacgc cacccgcgag cgcctgcgcg
     5821 cgatcgtgca ggacggcgat gcctcggcga tgccggaagt gctggccgcg atccgtgcta
     5881 ccggtggcct tgagtacagc cgccgccgtg ccgaggaata cgccgaagcc gccgagcgcg
     5941 cgctcgatgg cctggccgac aacgatgcgg ttgccgcgct gcgtggcctc gcacgctacg
     6001 cggtgcagcg ct
//
LOCUS       DAOKIP010000226         5999 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.227,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000226 DAOKIP010000000
VERSION     DAOKIP010000226.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 5999)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5999)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5999
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.227"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(103..1689)
                     /locus_tag="QEL58_003488"
     CDS             complement(103..1689)
                     /locus_tag="QEL58_003488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008268654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HDS1677920.1"
                     /translation="MTTWDAILIGGGHNGLVCAAYLARAGKKVLVLERRGVLGGAAVT
                     EEFHPGFRNSVASYTVSLLQPKVIDDLQLHAHGLRIVARPANNFLPLPDGRYLLSAPG
                     RTQAEVAKFSERDAQRLPEYEARLEIFADVLRAWALRAPPDIGVAGGWRALPALWQMG
                     RLGRELSTLDPSLRQELLDLFTLSAAEYLDRWFESEPIKALFGFDGIVGNYASPYTPG
                     SAYVLLHHVFGQCNGVKGAWGHAIGGMGAISQAIAASARAAGAELRVEAGVQRVLIEQ
                     GRAVGVELANGETLRARAVIANVNPKLLYEHLLEPAHVPPATRERMANWRCGSGTFRM
                     NVALSRLPEFRALPGPGDHLSAGIIMAPSLDYMDRAWLDARREGWSREPIVEMLIPST
                     LDDSLAPPGQHVASLFCQHVAPVLPDGRHWDDHRDTVADLMIATVERYAPGFAGSVLG
                     RQVLSPLDLERTFGLIGGDIFHGALSANQLFSARPMVGQAGYRGALPGLYLCGSGTHP
                     GGGVTGAPGHNAAQVVLQDG"
     gene            complement(1686..2168)
                     /locus_tag="QEL58_003489"
     CDS             complement(1686..2168)
                     /locus_tag="QEL58_003489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008267987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HDS1677921.1"
                     /translation="MAHKNTICVWYDNGALEAATFYASILPDSAVTAVHHAPGDYPDG
                     KEGNVLTVEFTVCGIPCVGLNGGTAFKHSEAFSFQIQTEDQAETDRLWSAIVGNGGQE
                     SQCGWCKDRWGISWQISPRMLIAAVTSKDKALAKRAFNAMMPMKKIDIATIEAAIRNA
                     "
     gene            complement(2293..4302)
                     /locus_tag="QEL58_003490"
     CDS             complement(2293..4302)
                     /locus_tag="QEL58_003490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007969573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M13 family metallopeptidase"
                     /protein_id="HDS1677922.1"
                     /translation="MPNFRPLAIALGISLATLVPTHDAFAAAKKKAARAPAVSAQCSD
                     FYDATNAGWLKANPVPQTGATTALGQLVDRSRQQQRELLDAAMKSPQGNVQKLLGDFW
                     ASGLDEAAVEADGSNPIAPLLTRINAIKKAKDVPASIAALHQVGIPVAFNFGPDVDLK
                     ALDRHIGYFMQGGMGLPDPAFYTRTDADTVALMGRYRAYVKQILALTGTPAAKLDAES
                     QSVIALETELARNAQSLAGINNPFNNYAPISTKELNSRYRNLQLDAFLKAQGVDDDLV
                     SLADPGLFKQLDGMVTKLKPDQWKAYLRWRVGDAMAPYLSKAYRDAEFEFRGRVLRGE
                     TLPPQRWEDVLDAINVAAGPMVGREYAARYLSAEDRRQAAWIVDKVREVQIEAVRNSS
                     WMSAEAKTEAQAKLAALKIEIGTPLRDLDYSVQPMGRGSFGGNMLIASTWRHREEMKR
                     IGKGNADRRWDVLPQQPSLAYDLAQNRLIVTAAILQGPVFNAKADAADKFGSFGGLVG
                     HELTRAIDAKGALVDAKGELRSWWTPADKTAWTLLGNRVAAQYGAYDFPGVKGAKVNG
                     TLTQEENLADIAGLELAWAAYTAQEPKAKQAQQQGFFRAWSALWAQQLSPNEAVRRLT
                     ADIRAPGLWRSNGTLANLPAFGATFSCKAGQPMQRSEAEQIKVWR"
     gene            complement(4461..>5999)
                     /locus_tag="QEL58_003491"
     CDS             complement(4461..>5999)
                     /locus_tag="QEL58_003491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005414104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase"
                     /protein_id="HDS1677923.1"
                     /translation="KNSAVNMAYASQGGLGLPDTTYYTDAKNADKLKAYQAHVAKVLE
                     LSGVAAADAAKQAEDVVKFETRLAKASKSRVELSRNVELFYNPVTLADADKLTPNFSW
                     TEFFKSQGVAAPEKFSLAMPAFHEEVSKALGDTDPSVWRAYLRFHTVDSASPYLADAF
                     VQENYEFYGKTLNGQKEQKPRWKRVLGTIENDAGEAFGQLYVKVAFSPEAKAKMEELV
                     KNLAASLKERIQGLSWMSEETKAKAIAKWETFTPKIGYPDKWRDWAGLQTQRDSYLGN
                     VRAASEFNYKFNLSKIGKPVDKTEWGMTPQTVNAYYNPLQNEIVFPAAILQPPFFDPK
                     ADDALNYGGIGAVIGHEMTHGYDDQGARFGPTGNMEDWWTPADKKNFEGLTGKLVKQF
                     DQYKVDGQAVNGHLTLGENIADLGGLATAYDALQKATAGKEDPKVDGFTRDQRFFFNW
                     ATVWRTKYTPENAKVRLATDPHAPAQFRAMGAPSNLPTFAAAFQCKAGSPMARAGEQQ
                     VVIW"
BASE COUNT          909 a         1957 c         2028 g         1105 t
ORIGIN      
        1 gccaaccttg gttggcacgc tttgaatgag atcatttgac gcggtagatg ccaacctcgg
       61 ttggcgttcg ctctgccgct ctgtgccaac caaggttggc acctacccat cctgcaacac
      121 cacctgcgcg gcattgtgcc ccggtgcacc ggtaacgccg ccgcccggat gggtgcccga
      181 accgcacagg tacagcccgg gcagcgcgcc gcggtagccg gcctggccga ccatcggccg
      241 cgccgagaac aactggttgg cactgagcgc accgtggaag atgtcgccac cgatcaggcc
      301 gaaggtccgt tcaagatcca gcggtgacag cacctggcgg cccagcacgc tgccggcgaa
      361 ccctggcgca tagcgttcga cggtggcgat catcaggtcg gctacggtgt cccgatgatc
      421 atcccagtgg cggccgtcgg gcagcaccgg tgccacgtgc tggcagaaca ggctggccac
      481 atgctgcccg ggcggtgcca gcgaatcgtc cagcgtactc ggaatcagca tctccacgat
      541 cggttcgcgt gaccagccct cgcggcgcgc atccagccag gcgcggtcca tgtagtccag
      601 gctgggcgcc atgatgatgc cggcgctgag gtgatcgccg gggccgggca gggcgcggaa
      661 ctccggcagc cgcgacagcg ccacgttcat ccggaacgtg ccggaaccgc agcgccagtt
      721 cgccatgcgt tcgcgtgtgg cgggtggtac gtgcgccggt tccagcagat gttcgtagag
      781 cagtttcggg ttgacgttgg cgatcaccgc gcgtgcgcgc agggtttcgc cgttggccag
      841 ttccacgccc accgcgcggc cctgctcgat cagcacgcgc tgcacgccgg cctccacgcg
      901 cagttccgca ccggccgcgc gcgccgaggc ggcgatggcc tggctgatcg cgcccatgcc
      961 accaatcgcg tggccccaag cgccctttac gccgttgcac tggccgaaca cgtggtgcag
     1021 cagcacgtag gcactgcccg gggtatacgg gctggcgtag ttgccgacga tgccatcgaa
     1081 accgaacagc gccttgatcg gctcgctctc gaaccagcgg tccagatact ccgccgccga
     1141 cagcgtgaac aggtccagca gttcctgccg cagcgaggga tccagcgtcg acagttcgcg
     1201 cccgagacga cccatctgcc acagtgcggg cagggctcgc caaccacctg caacgccaat
     1261 atccggcggt gcgcgcaggg cccacgcgcg cagcacgtcg gcaaagatct ccaggcgtgc
     1321 ctcatattcg ggcaggcgct gcgcatcccg ctcggagaac ttcgcgactt cggcctgggt
     1381 gcggccgggt gccgagagca gatagcggcc atccggcaat ggcaggaagt tgttggcggg
     1441 gcgcgcgacg atgcgcagcc cgtgcgcatg cagttgcagg tcgtcgatca ccttgggctg
     1501 cagtagtgac accgtgtacg acgccaccga gttgcgaaag cccggatgga attcctcggt
     1561 gaccgccgca ccgccgagaa cgccacgacg ttccagcacc agtaccttct ttccggcgcg
     1621 cgccagatag gccgcgcaga ccaggccgtt gtggccaccg ccgatgagga tcgcatccca
     1681 tgtcgtcatg cgttgcggat cgccgcttcg atggtggcga tgtcgatctt cttcatcggc
     1741 atcatcgcgt tgaaggcgcg cttggccagt gccttgtcct tgctggtcac cgctgcgatc
     1801 agcatgcgcg ggctgatctg ccaggagatg ccccagcggt ccttgcacca gccgcattgg
     1861 ctctcctggc cgccattgcc gacgatcgcg ctccacagac ggtcggtctc ggcctggtct
     1921 tcggtctgga tctggaagga gaacgcttcg ctgtgcttga acgcggtacc gccgttgagg
     1981 ccgacgcagg gaatgccaca gacggtgaac tcgacggtaa gcacattgcc ttccttgccg
     2041 tcgggatagt caccgggcgc gtgatgcacg gcggtcaccg cgctgtcggg caggatgctg
     2101 gcgtagaagg tggcggcctc gagcgcgccg ttgtcatacc agacacagat cgtgttcttg
     2161 tgtgccatgt cggactccac gatggacgag gcagcagcga tagcatgccc ggtgttaacc
     2221 ccggatcgtg ctgcacccgc aaaaaaaaag ggcgcccgaa ggcgcccctg tgttaccggt
     2281 tcatcagcag gctcagcgcc agaccttgat ctgctcggcc tcgctgcgct gcatcggctg
     2341 gccggccttg cagctgaagg tggcaccgaa ggccggcagg ttggccagcg tgccattgct
     2401 gcgccacagg cccggcgcgc ggatgtcggc ggtcaggcgg cgcacggctt cgttcggcga
     2461 cagctgctgt gcccacagcg ccgaccaggc gcggaagaag ccctgctgct gtgcctgctt
     2521 ggccttcggt tcctgtgcgg tgtacgcggc ccaggccagt tccaggccag cgatgtcggc
     2581 caggttctct tcctgggtga gcgtgccgtt gaccttggca cccttcacgc cggggaagtc
     2641 gtaggcgccg tactgtgcgg ccacgcggtt gccgagcagg gtccaggcgg tcttgtcggc
     2701 cggggtccac cagctgcgca gctcgccctt ggcatcgacc agtgcaccct tggcatcgat
     2761 cgcacgggtc agctcgtggc cgaccaggcc accgaagctg ccgaacttgt cggcggcgtc
     2821 agccttggcg ttgaacaccg ggccctgcag gatcgcggcg gtaacgatca ggcggttctg
     2881 cgccaggtcg taggccagcg acggctgctg cggcagcacg tcccagcgac ggtcggcgtt
     2941 gcccttgccg atgcgcttca tttcctcgcg atggcgccag gtcgaagcga tcagcatgtt
     3001 gccgccgaac gagccacggc ccatcggctg cacgctgtag tccaggtcgc gcagcggggt
     3061 gccgatctcg atcttcagcg cggccagctt ggcctgcgct tcggtcttgg cttcggcgct
     3121 catccagctg ctgttcctga ccgcttcgat ctgcacttcg cggaccttgt cgacgatcca
     3181 cgccgcctgg cgacggtctt cggccgacag gtaacgcgcg gcgtactcgc ggccgaccat
     3241 cgggccggcg gccacattga tcgcgtccag tacgtcttcc cagcgctgcg gcggcagggt
     3301 ttcgccgcgc agcacgcggc cgcggaattc gaactcggcg tcgcggtagg ccttggacag
     3361 gtacggcgcc atcgcgtcac ccacgcgcca gcgcaggtag gccttccact ggtccggctt
     3421 gagcttggtg accatgccgt cgagctgctt gaacaggccc gggtcggcca gcgagaccag
     3481 gtcgtcatct acgccctggg ccttcaggaa ggcatccagc tgcaggttgc ggtagcggct
     3541 gttgagctcc ttggtggaga tcggcgcgta gttgttgaac gggttgttga tgccggccag
     3601 cgactgcgca ttgcgtgcca gctcggtttc cagcgcgatc accgactgcg attcggcatc
     3661 cagcttggcg gcgggggtgc cggtcagtgc caggatctgc ttgacgtagg cgcggtagcg
     3721 acccatcagc gccacggtgt cggcgtcggt gcgggtatag aacgccgggt ccggcaggcc
     3781 catgccgccc tgcatgaagt agccgatgtg gcgatccagc gccttcaggt ccacgtcggg
     3841 gccgaagttg aaggccaccg gaatgccaac ctggtgcagc gcggcgatcg acgccggcac
     3901 gtccttggcc ttcttgatgg cgttgatgcg ggtcagcagc ggggcgatcg ggttggaacc
     3961 gtcggcttcc accgcggctt cgtccaggcc gctggcccag aagtcaccca gcagcttctg
     4021 cacgttgccc tgcggcgact tcatcgcggc atcgagcagt tcgcgctgct gctggcggct
     4081 gcgatcgacc agctgtccca gtgcggtggt ggcaccggtc tgcggtacgg ggttggcctt
     4141 cagccagcct gcgttggtgg cgtcgtagaa gtcgctgcac tgggcactga cagccggggc
     4201 gcgggcggcc ttcttcttgg cggcggcaaa cgcatcgtgg gtcgggacca gggtcgccag
     4261 gctgatgccc agggcgatgg caagcggacg gaagttgggc atgtggaacg aatccgtgat
     4321 ggattgaggg cgcgcgcact atagcaagcc gggcatcgac gcggcatgca ggcatcacgc
     4381 tgcgttcgca gggcgccgcc aaaaacaaag gcccgggaaa tcccgggcct ttgcaggtct
     4441 gccgcagcgt cagccgtggc ttaccagatc accacctgct gctcgccagc gcgggccatc
     4501 ggcgaaccgg ccttgcactg gaacgcagcg gcgaaggtcg gcaggttcga cggcgcaccc
     4561 atggcgcgga actgcgccgg ggcatgcggg tcggtggcca ggcggacctt ggcgttttcc
     4621 ggggtgtact tggtgcgcca cacggtggcc cagttgaaga agaagcgctg gtcgcgggtg
     4681 aagccgtcga ccttcggatc ttccttgccg gcggttgcct tctgcagggc gtcgtaggcg
     4741 gtggccaggc cacccaggtc ggcgatgttc tcgcccaggg tcaggtggcc gttcacggcc
     4801 tggccgtcga ccttgtactg gtcgaactgc ttgaccagct tgccggtcag gccttcgaag
     4861 ttcttcttgt cggccggggt ccaccagtct tccatgttgc cggtcggccc gaagcgcgcg
     4921 ccctggtcgt cgtaaccgtg ggtcatttca tggccgatca ccgcaccgat gccgccgtag
     4981 ttcagcgcgt cgtcggcctt cggatcgaag aacggcggct gcaggatggc agccgggaac
     5041 acgatctcgt tctgcagcgg gttgtagtac gcattgaccg tctgcggggt catgccccac
     5101 tcggtcttgt cgaccggctt gccgatcttg gacaggttga acttgtagtt gaactcgctg
     5161 gccgcgcgca cgttgcccag gtagctgtcg cgctgggtct gcaggccggc ccagtcacgc
     5221 cacttgtccg ggtagccgat cttcggggtg aaggtttccc acttggcgat ggccttggcc
     5281 ttggtttcct cgctcatcca gctcaggccc tggatgcgtt ccttcagcga cgcggccagg
     5341 ttcttcacca gttcttccat cttcgccttg gcttccggcg agaaggccac cttcacgtac
     5401 agctggccga aggcttcgcc ggcatcgttc tcgatggtgc ccagcacgcg cttccagcgc
     5461 ggcttctgtt ccttctggcc gttgagggtc ttgccgtaga actcgtagtt ctcctgcacg
     5521 aaggcgtcgg ccaggtacgg cgaagcgctg tccacggtgt ggaagcgcag gtaggcgcgc
     5581 cataccgacg gatcggtgtc gcccagcgcc ttgctcactt cctcatggaa ggccggcatg
     5641 gccagcgaga acttctccgg cgcggccacg ccctgcgact tgaagaactc ggtccagctg
     5701 aagttcgggg tcagcttgtc ggcgtcggcc agggtgaccg ggttgtagaa cagctcgacg
     5761 ttgcgcgaca gctcgacgcg cgacttggag gccttggcca ggcgggtttc gaacttgacc
     5821 acgtcctcgg cctgcttggc agcatcggcc gcggcgacac cggacagttc cagcaccttg
     5881 gcgacgtgcg cctggtaggc cttcagcttg tcggcgttct tggcatcggt gtagtaggtg
     5941 gtgtccggca ggcccaggcc gccctggctg gcgtaggcca tgttcacggc cgagttctt
//
LOCUS       DAOKIP010000227         5933 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.228,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000227 DAOKIP010000000
VERSION     DAOKIP010000227.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 5933)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5933)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5933
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.228"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(19..1032)
                     /locus_tag="QEL58_003492"
     CDS             complement(19..1032)
                     /locus_tag="QEL58_003492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005912141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00266 family protein"
                     /protein_id="HDS1677924.1"
                     /translation="MTQWYFHASAQADRVGPLDDPAARRYAQANPRALAWCQGMSGWT
                     PIPDVAELQAPAPGMPTTPPPVPAVSSGRADDIDFRIVGHEMQFVEIELDPGESAIAE
                     AGALMFKDATVQMDTVFGAANGDPGGFMGKVMAAGKRVLTGESLFATVYTQSGHGKGK
                     VAFAAPYPGTVLAMKLDQHGGRLICQKDSFLAGARGVQIGVQFQRRIMTGLFGGEGFI
                     MQKLEGDGWVFIHAGGCVIERELAAGERLDVDTGCVVAYHPTVDMDVRRVTGVKSMLF
                     GGEGVFLATLTGPGKVWLQSLPFSRLAGRMWMAAPQGGGQSRGEGSVLGGLGRMLDGD
                     NRF"
     gene            1192..3462
                     /locus_tag="QEL58_003493"
     CDS             1192..3462
                     /locus_tag="QEL58_003493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014645431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDS1677925.1"
                     /translation="MSPTRTSRGRFPVARPLVAALSALLPLVAAAQETPAAKDPVALD
                     ALQVTAQRRVENAKDVPVALSAIQGEKLDVLGSAGDDIRFLAARVPSLNIESSYGRAF
                     PRFYIRGLGNTDFDLNASQPVSLVYDDVVQESPLLKGFPLFDLANVEVLRGPQGTLFG
                     RNTPAGVVKFDSARPSQDADGYIRVGYGSYNSWNVQGAYGGPLTDRWSARVSAIYQRR
                     DDWVDNTRVGAPNSGFEGYDEAAGRVQFLYEGDDFEALFNLHKRKLNGTARLFRANII
                     QKGGNSLVENFDRDKVANDGVNFSDLETWGGSARLQWNLGSVTLHSITGYETAESLNR
                     GDIDGGYGAAFLGAGNYGPGLIPFSSESADGLPHHRQWTQEVRIESNEWGRFDWQAGV
                     FYFDEDVTINNFNYDSLTPGNPQTGHVVQNQRNKAWAVFASGDFDVTDRFKLRAGVRY
                     TQDKKDFSASVLQAVPFGTPVSGPYLANTDVNDVSWDVSGVYKLTDDINAYARVAKGF
                     RAPSIQGRLAFAPGLSQADSEKVISYEAGIKADLFERRARLGLSVFRYNVDGQQLIAV
                     GGSNNTATLLNANKTIGQGVELDLEAYLADNVLLTFGSSYNDTEIKDKNLAVAICGGG
                     CTITDPTTVIGGQTYALVNGNPLPQAPKWIHNATLRVGFPLSDGSELYAYTDWAYRSE
                     VNFFIYESPEFRGRSSLEGGLRLGYNWDYGQYDVAVFGRNLTNQTRVVGAIDFNNLTG
                     FLNEPRTWGVEFTAKF"
     gene            3658..4215
                     /locus_tag="QEL58_003494"
     CDS             3658..4215
                     /locus_tag="QEL58_003494"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677926.1"
                     /translation="MTCRTLQAVVVSIALLVSLQSRAHVAGVDTAPLAQLEEQRRDLD
                     RRTASITDRRSFDAHAKATEGTGAFPLYKLAPASRARFVESLRFNARGLTTFDYSDLV
                     RELGAADIHRLLKPFGFQHLLAVLPDVRVNSQEDKEVLETLRATRALRCGMGEHCNET
                     DYPGYKCIQHATCEDSTQHICTSSC"
     gene            4197..5165
                     /locus_tag="QEL58_003495"
     CDS             4197..5165
                     /locus_tag="QEL58_003495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677927.1"
                     /translation="MHVQLLIAAMRHPRIGHAMVLRASLWTVVVLYAATRAWPCMAGE
                     TLEEGYAAVLQAMDRLSGPDHAWHDRGNQVEYTFQAHVLPHARALPALSTLDLRLLLR
                     AIHATTRVTRQPDHSGLAMRVGLQLRARGALLAADMREGAAIAVISRDRGALKPSSPW
                     APAFGGHPLPQMPEAVQRFEYWMPSPDGAAYSSGVADMASLDIVVIAHPACGFTRAVA
                     DAARVDPQLLQMLSGVRSLWLSPQDGTLDTRIFTNWSRRHPDLPIRIAARQSAFPAFD
                     YWGTPTFYVLRDGEVAARVVGWPRDGNKTALVQAFAKAGIRIAGPP"
     gene            complement(5188..>5933)
                     /locus_tag="QEL58_003496"
     CDS             complement(5188..>5933)
                     /locus_tag="QEL58_003496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004133277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HDS1677928.1"
                     /translation="VEANITTKAVGYLDKSAVPASLDLVPAPPATGSAALALDEQVSR
                     EARALRGSPRFAQAGIDAELGFPEGANHFSCAADIDVDAVKTPALYRLLERSRIDASA
                     ATKAAKNHYQRPRPFMVNGEPTCSPKDEDGLRKNGSYPSGHTSIGWAWALILSEIAPD
                     RADAIQARGRNYGESRLVCNVHWQSDILEGRFMGAAAVARLHDNAAFNKDLLAARREI
                     AAARKAGLHSSRDCATENAVLKVRPQSAL"
BASE COUNT         1007 a         2008 c         1932 g          986 t
ORIGIN      
        1 acctaccggg cgagtgggtc agaaccggtt gtcgccgtcc agcatccggc ccagtccgcc
       61 gagcaccgag ccctcgccac ggctctggcc accgccctgc ggcgccgcca tccacatgcg
      121 tccggccagg cgcgagaacg gcagcgattg cagccagacc ttgcccgggc cggtcagcgt
      181 ggccaggaac acgccctcgc caccgaacag catgctcttg acgccggtga cgcggcgcac
      241 atccatgtcc acggtcgggt ggtaggccac cacgcagccg gtatccacgt ccaggcgctc
      301 gccagcggcc agctcgcgct cgatcacgca gccgccagcg tggatgaaca cccagccgtc
      361 gccctccagc ttctgcatga tgaagccctc gccgccgaac agcccggtca tgatcctgcg
      421 ctggaactgc acgccgatct gcacgccgcg cgcgccggcc aggaagctgt ccttctggca
      481 gatcaggcgg ccgccatgct ggtccagctt catcgccagc acggtgccgg ggtagggcgc
      541 ggcgaaggcg accttgccct tgccgtggcc gctctgggtg tagacggtgg cgaacaggct
      601 ctcgccggtc agcacgcgct tgccggcggc catcaccttg cccatgaagc cgcccgggtc
      661 gccattggca gcgccgaaca ccgtgtccat ctgcaccgtg gcgtccttga acatcagcgc
      721 gccggcctcg gcgatggcgc tttcgccggg gtcgagctcg atctccacga actgcatttc
      781 atggccgacg atacggaagt cgatgtcgtc agcgcggccg ctggagacgg cggggaccgg
      841 cggcggggtc gtgggcatgc ccggtgccgg cgcctgcagc tcggccacgt cggggatggg
      901 ggtccatccg ctcatgccct ggcaccaggc cagcgcgcgc gggttggcct gcgcatagcg
      961 gcgcgcggcc gggtcatcga gcgggccgac gcggtcggcc tgggcggagg catggaagta
     1021 ccactgggtc atcgcgacgg ctccgcaggg ctggaaaacc ccgagtctag cgagcgcgcc
     1081 ggggcgcggg cgacggcgcc atgaacggca ggcatttgcg aggcaggtgc tgtattgcaa
     1141 caattatctg gtagcgccgt tttaccaccc ctccaaacac agcctaccgc catgtccccg
     1201 acccgcactt cccgtggccg atttccggtc gcgcgccccc tcgttgccgc tctttccgcc
     1261 ctgctgccgc tggtagcagc cgcccaggaa acccccgctg ccaaggatcc ggttgccctc
     1321 gatgccctgc aggtgaccgc gcagcgccgc gtcgagaacg ccaaggacgt accggtcgca
     1381 ctcagcgcga tccagggcga gaagctggat gtgctcggct cggccggcga tgacatccgc
     1441 ttcctggccg cgcgcgtgcc cagcctcaac atcgagtcgt cctacggccg tgccttcccg
     1501 cgcttctaca tccgcggcct gggcaacacc gatttcgatc tcaatgcctc gcagccggtg
     1561 tcgctggtgt atgacgacgt ggtgcaggaa agcccgctgc tgaagggctt cccgctgttc
     1621 gacctggcca acgtggaagt gctgcgcggc ccgcagggca cgttgttcgg ccgcaacacc
     1681 ccggccggcg tggtcaagtt cgattcggcg cgtccgtcgc aggatgccga tggctacatc
     1741 cgcgtcggct acggcagcta caacagctgg aacgtgcagg gcgcctatgg cggcccgctg
     1801 accgaccgct ggtcggcgcg cgtgtcggcg atctaccagc gccgcgacga ctgggtcgac
     1861 aacacccgcg tcggcgcacc caacagtggc ttcgaaggct acgacgaagc tgccggccgc
     1921 gtgcagttcc tgtacgaagg cgacgacttc gaagcgctgt tcaacctgca caagcgcaag
     1981 ctcaacggca ccgcgcgcct gttccgcgcc aacatcatcc agaagggcgg caattcgctg
     2041 gtcgagaact tcgaccgcga caaggtggcc aacgacggcg tcaacttctc cgacctggaa
     2101 acctggggtg gcagcgcgcg cctgcagtgg aacctcggct cggtgaccct gcactcgatc
     2161 accggttatg aaaccgccga atcgctcaac cgtggcgaca tcgacggcgg ctacggtgca
     2221 gcattcctgg gggccggcaa ctacggcccg ggcctgattc cgttctcgtc cgaatcggcc
     2281 gacggcctgc cgcaccaccg ccagtggacg caggaagtcc gcatcgagtc caacgagtgg
     2341 ggccgcttcg actggcaggc cggcgtcttc tacttcgatg aagacgtgac catcaacaac
     2401 ttcaactacg actcgctgac cccgggcaat ccgcagaccg gccacgtggt gcagaaccag
     2461 cgcaacaagg cctgggcggt gttcgcctcg ggtgacttcg acgtcaccga ccgcttcaag
     2521 ctgcgtgccg gcgtgcgcta cacccaggac aagaaggact tcagcgccag cgtgctgcag
     2581 gccgttccgt tcggcacccc ggtcagtggc ccgtacctgg ccaacaccga cgtcaacgac
     2641 gtcagctggg atgtcagcgg cgtgtacaag ctgaccgatg acatcaacgc ctacgcccgc
     2701 gtggccaagg gcttccgcgc gccgtcgatc cagggccgcc tggccttcgc cccgggcctg
     2761 tcgcaggccg attcggagaa ggtgatctcg tatgaagccg gcatcaaggc cgacctgttc
     2821 gagcgtcgtg cacgcctggg cctgagcgtg ttccgctaca acgtcgacgg ccagcagctg
     2881 atcgcggtgg gcggcagcaa caacaccgcc accctgctca atgccaacaa gaccatcggc
     2941 cagggcgtgg agctggacct ggaggcctac ctggccgaca acgtcctgct gaccttcggc
     3001 agcagctaca acgacaccga gatcaaggac aagaacctgg cggtggcgat ctgtggcggt
     3061 ggctgcacca tcaccgaccc gaccaccgtg atcggtggcc agacctatgc gctggtcaac
     3121 ggcaacccgc tgccgcaggc gccgaagtgg atccacaacg cgaccctgcg cgtcggcttc
     3181 ccgctcagcg atggcagcga gctgtacgcc tacaccgact gggcctaccg cagcgaggtc
     3241 aacttcttca tctacgagtc gccggaattc cgcggccgta gttcgctgga aggcggcctg
     3301 cgcctgggct acaactggga ttacggccag tacgacgtgg ccgtgttcgg ccgcaacctg
     3361 accaaccaga cccgcgtggt cggcgcgatc gacttcaaca acctgaccgg cttcctcaac
     3421 gagccgcgta cctggggcgt ggaattcacc gcgaagttct gatgcggttg aggcaattac
     3481 cgttcgccga aagggggacg ggagcacgga aggcgcggcg caagctgcgc cttctttgtt
     3541 gcaggatacg gcgaaataat gtcgcatttg gactcaaatc agtcctgatt ggcgtcgaca
     3601 gacaaaagcg gtgtaggact gtgcgcaccg gaatctccgg ggagaggagg aagcgcgatg
     3661 acgtgcagaa cgcttcaggc cgtcgtggta tcgatcgcct tgctggtgtc ccttcaatcg
     3721 cgtgcgcatg tggctggcgt cgacacggcc ccactggcac agctggaaga gcagcggcgc
     3781 gatctggaca ggcgaacggc atcgatcacc gaccgtcgat ctttcgatgc gcatgcaaaa
     3841 gcaaccgaag gcaccggcgc ctttccactc tacaagcttg cccctgcatc gcgtgcccga
     3901 tttgtcgaat cattgcgatt caatgcccgc ggactgacca cgttcgacta ctccgatctc
     3961 gtgagggaac tgggagctgc tgacatccac cggctgctca agcccttcgg cttccagcat
     4021 ctgcttgccg tgcttccaga tgtcagggtg aactcgcagg aggacaagga ggtactggag
     4081 acattgcggg cgacccgtgc cctgcgttgc ggcatgggcg agcattgcaa tgaaacggac
     4141 tacccgggtt acaagtgcat ccagcatgcg acctgcgagg actcgaccca gcacatatgc
     4201 acgtccagct gctgatcgcc gcgatgcggc acccacggat tggtcacgcc atggtcctgc
     4261 gggcgagcct ctggactgtt gtcgtgctgt acgcagcgac gcgggcctgg ccctgcatgg
     4321 ccggagaaac cctcgaggaa ggctacgctg ccgtgctgca agcgatggac aggctttccg
     4381 ggccagacca cgcctggcac gaccgcggca accaggttga gtacaccttc caggcccacg
     4441 tcctgcctca tgcgcgtgct ctacccgcgc tttcgaccct ggacctgcgt cttctgttgc
     4501 gagcgatcca cgcgacgaca cgtgtaacca ggcagcccga tcattccggg ctcgccatgc
     4561 gggtcggcct gcagctgcgc gcgcgaggtg cgctgcttgc cgctgacatg cgcgagggtg
     4621 cggccattgc cgtgatcagc cgcgatcggg gtgcactgaa gccctcatcg ccatgggcgc
     4681 ccgcctttgg cggccacccg ctaccccaga tgccggaggc cgtacagcgc ttcgagtact
     4741 ggatgcccag ccctgacggc gcggcctaca gcagcggagt cgcagacatg gcctcactgg
     4801 atatcgtcgt catcgcgcat ccggcctgtg gattcacccg cgcggtcgcc gacgcagcac
     4861 gcgtggatcc acagctgctc cagatgctgt ccggcgttcg ttcgctctgg ctttcaccac
     4921 aggacggaac gctggatacc cgcatcttca ccaactggag caggcgtcac cccgatctgc
     4981 cgatacgcat cgcggcacgt cagtcggcgt tccctgcgtt tgactactgg ggaacgccga
     5041 ccttctacgt cctgcgcgat ggcgaggttg ctgcacgtgt tgtcggctgg ccacgcgatg
     5101 ggaacaagac tgcgcttgtg caggcattcg ccaaggctgg catcaggata gccggaccgc
     5161 catgaccgca agcgcagcgg agcgggatta cagcgcgctc tgcgggcgca ccttcagcac
     5221 ggcattctcg gtggcacagt cgcggctgga gtgcaggccg gccttgcgcg cggcggcgat
     5281 ctccctgcgt gcggccagca gatccttgtt gaacgcggcg ttgtcgtgca ggcgggcaac
     5341 ggcggcggcg cccatgaagc ggccttcgag gatgtcgctc tgccagtgca cgttgcacac
     5401 caggcggctc tcgccgtagt tgcggccgcg ggcctggatg gcatcggcgc gatccggagc
     5461 gatctccgac aggatcaatg cccaggccca gccgatcgag gtgtggccgg acgggtagga
     5521 gccattcttg cgtaggccgt cttcgtcctt cggcgagcag gtcggctcac cgttgaccat
     5581 gaacgggcgc gggcgctggt aatggttctt ggcggctttg gtggcggcgc tggcgtcgat
     5641 ccggctgcgt tccagcaggc gatacagggc cggggtcttc accgcatcga cgtcgatgtc
     5701 ggcggcacag gagaagtggt tggcgccctc ggggaagccg agttcggcat cgatgccggc
     5761 ctgggcgaag cgcgggctgc cacgcagcgc gcgggcttca cggctgacct gctcgtcgag
     5821 ggcgagggca gccgaaccgg tcgccggcgg cgccggcacc aggtccaggc tggctggtac
     5881 cgcactcttg tccaggtaac ccaccgcctt ggtggtgatg ttggcttcga cgg
//
LOCUS       DAOKIP010000228         5914 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.229,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000228 DAOKIP010000000
VERSION     DAOKIP010000228.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 5914)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5914)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5914
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.229"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(75..1235)
                     /locus_tag="QEL58_003497"
     CDS             complement(75..1235)
                     /locus_tag="QEL58_003497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005415800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family secretion protein"
                     /protein_id="HDS1677929.1"
                     /translation="MPPVPPRPDDIDADNVTPPPPTDAAPAPTPAAPAAAPKYLKPSA
                     RSVVVMVVVALLGIALILRAWHLWPFTSSVMVTDNAYVRGQITVMAPQVNGYVTEVLV
                     KDFQHVKKGEPLLRIDDRIYAQRVAQAQATLDSARAALANSDQSQAQNRAQIASAHAT
                     LSAGQAELQRSRNEARRYEELAAQQLVSINDRDKFRTSQASAQASVQQSQAQIRIAEE
                     TLVSTRVARKSLEAQVESAQAQLELARIDLANTVIHAPRDGQISEASVRVGQYVAAGS
                     QLLFLVPDTLWVVANYKEGQTWQMAIGQPASFSVDAFHGQVLSGRVEEIAPATGSEFS
                     VLRPDNASGNFTKVVQRLPVRIRIDGEQKLAAQLRPGMSVIVRVDTATKPMD"
     gene            complement(1246..2919)
                     /locus_tag="QEL58_003498"
     CDS             complement(1246..2919)
                     /locus_tag="QEL58_003498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDS1677930.1"
                     /translation="MVQPYLKPVPDWEEHEKPTMPGSASMPWHPPHRRVAYALVSLLV
                     AITGGLGNALVTANLPFLQGQLALTPTQGSWLVAAYAMVNVTANLLAFKFRQQYGIRL
                     FAEIGLGLYAALAVLHLFVGSFETTLLTRAASGFAGAACSTLGTLYMLQALPRRFTGN
                     LLVVGVGLSQLAVPIAWIVSPGLVDTGQWHQLYSFEAGLALCAFAAVVVLKLPPGIQI
                     KAFEPMDFLTFALLAPAVALLVIVLAQGYTRWWLDTPWLGWALVASIALSTTAFIIEH
                     YRRNPLLQTRWLASLPVLHFIVGAFLIRFLTTEQSYGVVNLMRTLGMGPDQLRPLFGV
                     IMAGVITGIAAASLTFGPKRLIAQLLMAILLLGTAAFFDQHRTSLDRPHDFYVSQFLA
                     SVGAGMFMGPLIMLGISAALKQGVDHMITFLVTLSITQTLGGLAGSAVLGTFQLHREQ
                     LYSSALTSQLDPADPVVAQRLRLQQQLYSAQITDPVLRSAQGSAQLAQITRREANVRG
                     FNDVFTLSGWLAIGFLCWLLLLSLRTAVLKQWRKRHPTSPAAATPVAPR"
     gene            complement(2919..3485)
                     /locus_tag="QEL58_003499"
     CDS             complement(2919..3485)
                     /locus_tag="QEL58_003499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005408692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDS1677931.1"
                     /translation="MTAQRADAAARRALILDAADHVFGQHGVTAPLDLVVERAQVGRA
                     TLYRNFPDRTALIQALLQRTVDRIRRQVEQLGDRDDALFEVFEGMAQRIIDSPALADY
                     WRAVDSDVPAMRTARETVRDLLEAPIARAKAAGLCRADLEKTDISLISGMLGAALRGK
                     TRDERAQLAGRALQLLRGGLQGAPSEAR"
     gene            complement(3713..5887)
                     /locus_tag="QEL58_003500"
     CDS             complement(3713..5887)
                     /locus_tag="QEL58_003500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013535911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDS1677932.1"
                     /translation="MALALAALLPSAAFAAGQDSAHRDRHLTELSSVQVTASPLQGDA
                     ESLARPVEVLAGERLDEQKAGTLGDTVAKLPGVQSTFFGPGVGRPIIRGQEGPRVAVL
                     SNGMGNMDASTVSADHATSIEPFLADQIEVLKGPATLLFGSGAIGGAVNVVDGRIARE
                     LPERPLSGRAELRGNSVNNERSGMFRLDGVSGNVVLHVDGLVRNGDDYRIPGYAVIDS
                     LEDHHDHDHDHDHDAAEGEEPRRGRLDNSSIRTRAGGVGATWLGDGGYFGVSASTYRT
                     NYGIPNGAHVHADGDDHGHDHGHDHGDEEEGGDEHDVRIDMVQNRFETKAGIYDPVSF
                     LKNINARVAYTDYEHVELEAGTPSTRFTNRGIEARLEAVQQQIGGWDGAFGLQFGNSD
                     FGAKGEEAFVPDTGTRNIGLFVLQEKQFGPFKLELGGRHDQVKLDPTGDYRRRTFGAT
                     NLSAAGIWKLNDAVDLRIGVDSSERAPTNEELYAAGAHIATRSLEIGDANLKTERGQR
                     VELGIHTHSDRLDFSASVYQTKFKDFIYLADTGVTEGLPVRAWTQQDAVFRGAEAEAL
                     VHLFEGGAGDWDLRLFGDYVKAKLDGSGSRNLDIAVPHGDHNHNYTVELANTGYLPRI
                     APARVGADLRWSKDGWRASVGAVRYSRQKDVAQNEEPSSGYTLVDAHLAYRWDRNASN
                     SYEVFLDGSNLTNREVRPHTSLLRDYSPLPGRGVAFGIRAFF"
BASE COUNT          949 a         1921 c         2064 g          980 t
ORIGIN      
        1 gaggggggcg gatccattcg ccattggcaa agggatctga ccccgtttca tatcggcgca
       61 accgggcctg taccctagtc catcggcttg gtcgcggtat ccacccgcac gatcaccgac
      121 atgcccggac gaagctgtgc tgctagcttc tgctccccgt cgatcctgat gcgcaccggc
      181 agccgctgca ccaccttggt gaagttgccg ctggcgttgt ccgggcgcag cacgctgaac
      241 tcggacccgg tggcgggcgc gatctcctcc acgcggccgc tcagcacctg gccgtggaag
      301 gcgtccaccg agaacgaggc gggctggccg atcgccatct gccaggtctg gccttccttg
      361 tagttggcga ccacccacag cgtgtcaggc accaggaaca gcagctgcga accggcggcc
      421 acgtactggc ccacgcgcac gctggcctcg ctgatctggc cgtcgcgcgg tgcgtggatc
      481 accgtattgg ccaggtcgat gcgggccagt tccagttgtg cctgcgcgct ctccacctgc
      541 gcttccaggc tcttgcgtgc cacccgggtc gataccagcg tttcctcggc gatgcggatc
      601 tgcgcctgcg actgctgcac gctggcctgc gccgaggcct ggctggtgcg gaacttgtcg
      661 cggtcgttga tcgacaccag ctgctgtgcg gccagctcct cgtagcggcg ggcctcgttg
      721 cgcgagcgct gcagttcggc ctggcccgcc gacagcgtgg cgtgcgcgga agcgatctgc
      781 gcacggttct gcgcctgcga ctggtccgaa ttggccagtg ccgcgcgtgc gctgtccagc
      841 gtcgcctgtg cctgggcgac acgttgcgca tagatgcggt catcgatgcg caacagcggt
      901 tcgcccttct tcacatgctg gaagtccttc accagcacct cggtcacgta gccgttcacc
      961 tgcggcgcca tcaccgtgat ctgcccgcgc acataggcgt tgtcggtcac catcacgctg
     1021 ctggtgaagg gccacaggtg ccaggcacgc aggatcagtg cgatccccag caacgccacc
     1081 accaccatca ccaccacgct gcgcgcgctg ggcttgaggt atttcggcgc ggccgccggc
     1141 gccgcgggcg tgggcgcagg cgccgcatcg gtcggtggcg gcggggtgac gttgtcggcg
     1201 tcgatgtcgt ctgggcgggg cgggacagga ggcatggcga tcaactcaac ggggcgcgac
     1261 cggcgtggcc gcagcagggg acgtggggtg gcgcttgcgc cattgcttga gcacggcggt
     1321 acgcagcgac agcagcagca accagcacag gaagccgatg gccagccagc cgctcagggt
     1381 gaacacatca ttgaagccgc gcacattggc ttcgcggcgt gtgatctgcg ccagctgcgc
     1441 gctgccctgc gcgctgcgca ggaccggatc ggtgatctgt gcgctgtaca gctgctgctg
     1501 caggcgcagg cgctgcgcga ccaccgggtc ggccggatcg agctggctgg tcaacgcgct
     1561 ggagtacagc tgctcgcgat gcagctggaa ggtgccgagc accgccgaac cggccaggcc
     1621 gcccagggtc tgggtgatcg acagcgtgac caggaaggtg atcatgtggt ccacgccctg
     1681 cttcagtgca gcggagatgc cgagcatgat cagcgggccc atgaacatgc cggcgccgac
     1741 cgaggccagg aactggctga cgtagaagtc gtgcggccgg tccaggctgg tgcggtgctg
     1801 gtcgaagaag gcagcggtgc ccagcagcag gatcgccatc agcagctggg cgatcagccg
     1861 cttcggaccg aacgtcagcg acgccgccgc gatgccggtg atcacgccgg ccatgatcac
     1921 gccgaacagc ggtcgcagct ggtccgggcc catgcccagc gtgcgcatca ggttgaccac
     1981 gccgtaggac tgctcggtgg tcaggaagcg gatcaggaac gcgcccacga tgaagtgcag
     2041 caccggcagg ctggccagcc agcgcgtctg cagcagcggg ttgcggcggt agtgttcgat
     2101 gatgaaggcg gtggtggaca gcgcaatgga ggcgaccagt gcccacccca gccacggcgt
     2161 atccagccac cagcgcgtat agccctgtgc cagcacgatc accagcaggg caacggcagg
     2221 ggcgagcagg gcgaaggtga ggaagtccat cggctcgaag gccttgatct ggatgccggg
     2281 cggcagcttc agcaccacca ccgccgcgaa cgcgcacagg gcaaggccgg cttcgaacga
     2341 atagagctgg tgccactggc cggtatcgac caggcccggc gagacgatcc aggcaatcgg
     2401 caccgccagc tgcgaaaggc ccacacccac caccagcagg ttgccggtga agcggcgcgg
     2461 cagcgcctgc agcatgtaca gcgtgcccag tgtcgaacag gcggcgccgg cgaagccact
     2521 ggcggcgcgg gtcagcaggg tggtctcgaa actgccgacg aacagatgca gcaccgccag
     2581 cgctgcgtac aggcccaggc cgatctcggc gaacaggcgg atgccgtact gctggcggaa
     2641 cttgaaggcc agcaggttgg cggtgacatt gaccatcgcg taggccgcca ccagccagct
     2701 gccctgggtc ggcgtcagcg ccagctggcc ctgcaggaac gggaggttgg cggtgaccag
     2761 cgcgttgccg aggccgccgg tgatcgccac cagcagcgat accagcgcgt aggccacgcg
     2821 ccgatggggc ggatgccagg gcatcgacgc cgaaccgggc atggtcggct tctcgtgctc
     2881 ctcccaatcc ggaaccggct tcagatacgg ctggaccatc agcgcgcctc gctgggtgct
     2941 ccctgcagac ccccgcgcag cagctgcagg gcacgcccgg ccagctgggc gcgctcgtcg
     3001 cgggtcttgc cgcgcagggc tgcgcccagc atgcccgaga tcagtgaaat atccgtcttc
     3061 tccagatcgg cgcggcacag gccggcggcc ttggcacggg caatcggcgc ttccagcagg
     3121 tcacgcacgg tctcgcgcgc ggtgcgcatg gccggcacgt ccgaatccac cgcacgccag
     3181 taatcggcga gggcaggcga atcgatgatg cgctgggcca tgccctcgaa cacctcgaac
     3241 agggcgtcgt cgcggtcgcc gagctgctcg acctggcgcc ggatgcggtc gaccgtacgc
     3301 tgcagcagcg cctggatcag cgcggtacgg tcggggaagt tgcggtacag ggtggcgcgg
     3361 cccacctggg cgcgttcgac caccaggtcc agtggagcgg tgacgccatg ttggccgaag
     3421 acatggtcgg cggcgtcgag gatgagggca cggcgggcag cggcatcggc acgttgggcg
     3481 gtcatgggtt cattttcgga cattaatgtc cggttggcga gacattgagt gacgggattg
     3541 tccgtttgtt gtcgtacgca catctttgtg acgcttgcgt gatggtgttg gcggaaatga
     3601 aaacgggggc ccgaaggccc ccgctggaga tgctttagat ccacgccatg cgtggatgag
     3661 ggaggtcaag agccctttcc tgcggaatgg gctccgaccc cgtcgtgcgc tatcagaaga
     3721 acgcgcggat gccgaaagcg acgccacgac ccggcagcgg cgagtagtcg cgcagcagcg
     3781 aggtatgcgg gcgcacttcg cggttggtca ggttgctgcc atccaggaac acctcgtagc
     3841 tgttgctggc gttgcggtcc caacggtagg ccaggtgcgc atcgaccagg gtgtagccgc
     3901 tgctcggttc ctcgttctgc gcgacgtcct tctggcggct gtaacgcacc gcgccgaccg
     3961 aggcgcgcca gccatccttc gaccagcgca ggtcggcacc gacgcgggcc ggagcgatgc
     4021 gcggcaggta gccggtgttg gccagttcca ccgtgtagtt gtggttgtgg tcgccgtgcg
     4081 gaacggcgat gtcgagattg cggctgccgc tgccatccag cttggccttc acgtaatcgc
     4141 cgaacaggcg caggtcccaa tcaccggcac ccccttcgaa caggtgcacc agcgcttcgg
     4201 cctcggcacc gcggaatacc gcgtcctgct gggtccaggc acgaaccggc aggccctcgg
     4261 taacgccggt gtcggccagg tagatgaagt ccttgaactt ggtctggtag accgatgcgg
     4321 agaagtccag gcggtcactg tgggtgtgga tacccagttc cacgcgctgg ccgcgctcgg
     4381 tcttcaggtt ggcgtcgccg atttccagcg aacgggtggc gatgtgcgcg ccagcggcgt
     4441 acagctcttc attggtcggc gcacgctcgg aactgtccac gccaatgcgc aggtccaccg
     4501 cgtcgttgag cttccagatg ccagcggcag acaggttggt ggcaccgaag gtgcggcgac
     4561 ggtagtcacc ggtcgggtcc agcttgacct ggtcgtggcg gccgcccagt tccagcttga
     4621 acgggccgaa ctgcttttcc tgcagcacga acaggccgat gttcctggtg ccggtatccg
     4681 gaacgaaggc ttcttcgccc ttggcgccga aatcactgtt gccgaactgc agaccgaagg
     4741 caccgtccca gccgccgatc tgctgctgca cggcttccag ccgcgcttcg atgccgcggt
     4801 tggtgaagcg ggtcgacggc gtaccagcct ccagctccac gtgctcgtag tcggtgtagg
     4861 ccacgcgtgc gttgatgttc ttcaggaacg agaccgggtc gtagatgccg gccttggtct
     4921 cgaagcggtt ctgcaccatg tcgatgcgca cgtcatgctc gtcgccgcct tcctcttcat
     4981 cgccgtggtc gtggccgtgg tcatgaccat gatcatcacc gtcggcgtgc acgtgcgcgc
     5041 cattgggaat gccgtagttg gtgcggtagg tgctggccga tacgccgaag taaccaccgt
     5101 cgcccagcca cgttgcgccg acgccaccgg cgcgggtgcg gatcgagctg ttgtccaggc
     5161 ggccacggcg cggttcttcg ccttcggctg catcgtgatc atggtcgtgg tcgtggtcgt
     5221 ggtgatcttc caggctgtcg atcaccgcgt aacccgggat gcggtagtcg tcgccgttgc
     5281 gcaccaggcc atccacatgc agcacgacgt tgccgctgac accatcgagg cggaacatgc
     5341 cgctgcgttc gttgttcacc gaattgccgc gcagttcggc acggccgctg agcgggcgct
     5401 ccggcagttc gcgcgcgatg cggccatcga ccacgttgac cgcaccaccg atggcgccgc
     5461 tgccgaacag cagcgtggcc ggccccttca gcacttcgat ctggtcggcc aggaacggct
     5521 cgatgctggt ggcatggtcg gcgctgaccg tggaggcatc catgttgccc atgccattgg
     5581 acagcaccgc cacgcgcggg ccttcctggc cgcggatgat cgggcggccg acgcccgggc
     5641 cgaagaacgt gctctgcacg ccgggcagct tggctacggt atcgccgagg gtgccggcct
     5701 tctgctcgtc caggcgttcc ccggcgagaa cctcgaccgg gcgcgccagc gattcggcat
     5761 cgccctgcag cggcgatgcg gtgacctgca ccgacgacag ctcggtcagg tggcggtcac
     5821 gatgggcgct gtcctggccg gcagcaaagg cggcggacgg cagcagggcg gcgagggcca
     5881 gggccaggga atgcggcttg agccgggggg tgtg
//
LOCUS       DAOKIP010000229         5870 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.230,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000229 DAOKIP010000000
VERSION     DAOKIP010000229.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 5870)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5870)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5870
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.230"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..336)
                     /locus_tag="QEL58_003501"
     CDS             complement(<1..336)
                     /locus_tag="QEL58_003501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component sensor histidine kinase"
                     /protein_id="HDS1677933.1"
                     /translation="MIRPNLWQKLAAVIAALMLMCCMALLALQMRANTRHEQEVVQRL
                     SLGLAEHIAQRSELMDTSGMRDAAVRALFGQLMAVNPSVEVYLLDDQGRILGHDAPSG
                     HLVRNRVDVA"
     gene            complement(333..1052)
                     /locus_tag="QEL58_003502"
     CDS             complement(333..1052)
                     /locus_tag="QEL58_003502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014645826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDS1677934.1"
                     /translation="MSAKRVLIVEDDAHIADLLRMHLGDEGYDVAHAASGDAGLRLLE
                     QDGPWDALVLDVMLPGVDGLQVCQRARAMARYVPIIIISARGSETQRIVGLELGADDY
                     LAKPFSMPELVARVRALLRRAEAMAQSARIDAGAIELGGLQLDPVARTASVEGTALEL
                     TPREFDLLLFFARHPDQVFARMELLNQVWGYQHDGYEHTVNTHINRLRSKIETDPANP
                     RRLLTVWGRGYKLVDPAGAAA"
     gene            1196..1771
                     /gene="msrB"
                     /locus_tag="QEL58_003503"
     CDS             1196..1771
                     /gene="msrB"
                     /locus_tag="QEL58_003503"
                     /EC_number="1.8.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (R)-S-oxide reductase MsrB"
                     /protein_id="HDS1677935.1"
                     /translation="MTLTRRHLLGLGGVATAAGLFGLGACSRAAPAAAEARPARQFEV
                     MHSDADWRQRLTPAQYAVLRQQATERPWSSPLNKEHRQGTFACAGCALPLFSSSTKFE
                     SGTGWPSFWAPLHNAIGEDRDVTFGMLRVEVHCRRCGGHLGHVFNDGPRPTGLRYCMN
                     GAALVFVPGAADGGTADGWRVPVGSSPTSGA"
     gene            1774..3540
                     /locus_tag="QEL58_003504"
     CDS             1774..3540
                     /locus_tag="QEL58_003504"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="redoxin family protein"
                     /protein_id="HDS1677936.1"
                     /translation="MLLLLLAYLGGALSLLSPCILPVLPFVFARADRPFVRSTLPLLL
                     GMALTFTVVASLAAVGSQWVAQANQVGRWIALVLMALFALALLWPRLADHLLAPFQRV
                     GARLSARADAADAAGRGGAGTSLLIGIATGLLWAPCAGPILGLVLTGAALHGASVGTT
                     ALLLAYALGAITALALAVWIGGRVFRAMQARLGVGDVLRKVLGVAALLAVVAIGLGWD
                     TGLLTRLSTVSTARIEQGLLDAVPGAQPAAPPMMMAGANAGADAPLPVEGTLPALDGA
                     TGWLNSPPLTAQQLRGKVVLVDFWTYSCINCLRAMPFVHEWERRYRDHGLVVIGVHTP
                     EFAFERDPRNVMKAVQQLKVEYPVALDNQYTIWRAFNNRYWPAQYFVDAQGNIRGHQF
                     GEGNYARSEQVIRRLLTEAGQTHLPPPADPAAADLQGVAAQADMGNLRSPETYLGHAR
                     AEQFASPGGQRSDTAFDYTLPTALALNQWGLSGQWTITDEAAQLQRAGGRIAFQFHAR
                     DLHLVLAPGQDGKPVRFRVWLDGKPLPATDAGSDVGADGSGVVNEHRLFQLVRQRGTV
                     GPHRFEIEFLDAGVQAYAFTFG"
     gene            3555..4292
                     /gene="msrA"
                     /locus_tag="QEL58_003505"
     CDS             3555..4292
                     /gene="msrA"
                     /locus_tag="QEL58_003505"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008267266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HDS1677937.1"
                     /translation="MKLSFEQGIAAGVAGLVATALIAGVLLVDHGAIAAPVEASAQAK
                     ALPVPTGDAAFRDDATHASVVFAGGCFWGVQGVFQHVKGVSNAVSGYIGGSAANAHYE
                     RVSSGQTGHAEAVKIDYDPRQVSYGQLMQVFFSVVHDPTQLNRQGPDHGSQYRSAIFS
                     DDARQQAASRAYIAQLGQAGSYRAPIVTQLGSGQRFYPAESYHQNYMTNYPQAAYIRY
                     YDAPKLAALGKQFPALYRRDAVLVPMR"
     gene            4441..>5870
                     /locus_tag="QEL58_003506"
     CDS             4441..>5870
                     /locus_tag="QEL58_003506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014035862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent aminotransferase family protein"
                     /protein_id="HDS1677938.1"
                     /translation="MDTDDQSAMIPPRYQRLSDELAEAIHGGRLPVGSRLPSLRQMAL
                     QRRLSLNTVIAAYRQLEDAGLVIPRPKAGFEVAPRLSVPERSLRDTPSAPTAPLQQAL
                     MARVLEAQRRPGVIDLAFAGPRGRQFYPGAQLARHTAQVLRHGQQTVETYARPNGSPR
                     LLAQIVRRGPRMGLHTHSDRLLLTHGAMEALQLALRAVTRSGDAVGIEAPSYFNLYPL
                     LATLGLQAIELPTHPQQGLDVDALEALLEHTALAALVVMPTVHNPLGCTMPTSAKQRL
                     AELVNARQLPLIEDAVYAELQFCEPPAPLLKAFDRDGWVMVVGGFSKTLAPDYRIGWL
                     EGGRFAERIALLKFQSTGGEPQLLGDAVAAYLEAGSYEHHLHRMRRLYREQVGRLRQL
                     VAEHFPAGTRATEPQGGFLLWLELPGVDTRELFERALQEDIVFMPGQVYSRGARYRHC
                     LRLSCCQTLDARFIGAVERLGAIAREL"
BASE COUNT          869 a         2095 c         1977 g          929 t
ORIGIN      
        1 cgccacgtcc acccggttgc gtaccagatg gccgctgggc gcatcgtggc cgaggatgcg
       61 gccctggtcg tccagcaggt agacctcgac gctggggttg actgccatca actggccgaa
      121 caaggcgcgc actgcggcgt cgcgcatgcc gctggtgtcc atcagctcgc tgcgctgggc
      181 gatgtgctcg gccaggccca gcgacaaccg ctgcaccact tcctgttcgt ggcgggtgtt
      241 ggcacgcatc tgcagcgcca gcagcgccat gcagcacatc agcatcagtg cggcgatcac
      301 cgccgccagc ttctgccaca ggttcggcct gatcatgccg ccgccccggc cggatcgacc
      361 agcttgtagc cgcgtcccca caccgtcagc agccgccgcg gattggccgg gtcggtttca
      421 atcttgctgc gcagccggtt gatatgggtg ttgaccgtgt gctcgtagcc atcgtgctga
      481 tagccccaga cctggttgag cagttccatg cgcgcgaaca cctggtccgg atgacgggcg
      541 aagaacagca gcaggtcgaa ttcgcgcggg gtcagttcca gcgcagtgcc ctccaccgac
      601 gcggtgcgtg caaccgggtc cagctgcagc ccgcccagtt cgatcgcgcc ggcatcgatg
      661 cgggcgctct gcgccatcgc ctcggcgcgg cgcagcagcg cgcgcacccg tgccaccagt
      721 tccggcatcg agaagggttt ggccaggtag tcgtccgcac ccagttccag gccgacgatg
      781 cgctgggttt cactgccacg tgcactgatg atgatgatcg gcacataacg cgccatcgcg
      841 cgtgcgcgct ggcacacctg caggccgtcc acgccgggca gcatcacgtc cagcaccagc
      901 gcatcccacg ggccgtcctg ttcaagcagg cgcagtcccg catcgccgct ggcggcgtgg
      961 gccacgtcat agccttcatc gcccagatgc atgcgcagca ggtcggcgat gtgggcatcg
     1021 tcttcaacga tcagcacgcg tttggcggac atcggcagct cggggccagt ggggggctgc
     1081 ccgcattgtg gcgcgggatg gtcgccgata cctcacgaaa aattgaatcc tgcgtgagga
     1141 ttcgttgacc cgggcgggcg cagcatggcc ccgtcgcccc ttcccggagt ccgccatgac
     1201 cctcacccgc cgccatctgc tgggcctggg cggtgtcgcc accgctgccg gcctgttcgg
     1261 cctcggcgcc tgcagccgcg ccgcaccggc cgctgccgaa gcgcgcccgg cgcgccagtt
     1321 cgaggtcatg cacagcgacg ccgactggcg ccagcgcctg accccggccc agtacgcggt
     1381 gctgcgccag caggccaccg agcggccatg gagcagcccg ctcaacaagg agcaccggca
     1441 gggcacgttc gcctgtgccg gctgcgcgct gccgctgttc tcctcgtcca ccaagttcga
     1501 gagcggcacc ggctggccga gcttctgggc gccgctgcac aacgccatcg gcgaagaccg
     1561 cgacgtcacc ttcggcatgc tgcgggtgga ggtgcactgc cgccgctgcg gcggccatct
     1621 cggccacgtt ttcaatgacg gcccgcgccc gaccgggctg cgctactgca tgaacggtgc
     1681 agcgctggtg ttcgttcccg gtgcggccga tggcggcacc gccgacggct ggcgggtgcc
     1741 ggtcggttct tcccccacgt ccggagcctg accatgctgc tgttgctgct tgcctacctc
     1801 gggggtgcgt tgtccctgct cagcccctgc atcctgccgg tgctgccgtt cgtgttcgcg
     1861 cgcgccgacc gtcccttcgt gcgcagcacg ctgccgctgc tgctgggcat ggcgctcacc
     1921 ttcaccgtgg tggccagcct ggcggcggtg ggcagccaat gggtggcgca ggccaaccag
     1981 gtcggccgct ggatcgcgct ggtgctgatg gcgctgtttg cgctggcgct gctgtggccg
     2041 cgactggcgg accatctgct ggccccgttc cagcgcgtgg gtgcacgctt gagcgcacgc
     2101 gccgatgccg ctgacgccgc aggacgcggt ggcgcaggga cctcgctgct gatcggcatc
     2161 gccaccggcc tgctgtgggc cccatgcgcc gggccgattc tgggcctggt gctgaccggc
     2221 gccgccctgc acggcgccag cgtcggcacc actgcgctgc tgctggccta tgcactgggc
     2281 gcgatcaccg cgctggcgct ggcggtatgg atcggcggcc gggtgttccg cgcgatgcag
     2341 gcgcggctcg gcgtgggtga tgtgctgcgc aaggtgctgg gcgtggccgc gctgctggcc
     2401 gtcgtggcga tcggcctcgg ctgggacacc ggcctgctga cccgcctgtc cacggtcagc
     2461 accgcgcgca tcgagcaggg cctgctggac gcggtacccg gcgcacaacc ggcggcaccg
     2521 ccgatgatga tggccggcgc caatgccggt gccgatgcac cgctgccggt ggagggcacc
     2581 ctgcccgcgc tggatggcgc caccggctgg ctcaacagcc cgccgctgac cgcccagcag
     2641 ctgcgcggca aggtggtgct ggtcgacttc tggacatact cctgcatcaa ctgcctgcgc
     2701 gcgatgccgt tcgtgcacga atgggagcgc cgctaccgcg accacggcct ggtggtgatc
     2761 ggcgtgcaca cgccggagtt cgccttcgag cgtgacccac gcaatgtgat gaaggcggtg
     2821 cagcagctga aggtcgagta ccccgtggcg ctcgacaacc agtacacgat ctggcgtgca
     2881 ttcaacaacc gctactggcc ggcgcagtac ttcgtcgatg cgcagggcaa catccgcggc
     2941 catcagttcg gcgagggcaa ctacgcgcgc tcggaacagg tgatccgccg gctgctgacc
     3001 gaagccggcc agacccacct tccgccgcca gccgatcccg ccgcggccga cctgcagggc
     3061 gttgccgcgc aggccgacat gggcaacctg cgctcgccgg aaacctacct gggccacgcc
     3121 cgtgccgaac agttcgcctc gcccggcggg caacgcagcg acaccgcgtt cgactacacg
     3181 ctgcccaccg ccctggcgct gaaccagtgg ggcctgtccg ggcagtggac gatcaccgac
     3241 gaagccgcgc aactgcagcg cgccggcggc cgcatcgcct tccagttcca tgcgcgcgac
     3301 ctgcacctgg tgctggcacc gggccaggac ggcaagccgg tgcgcttccg cgtgtggctg
     3361 gacggcaagc cactgcccgc caccgatgcc ggcagtgacg tcggcgccga tggcagtggc
     3421 gtggtcaacg aacaccgcct gttccagctg gtgcgccagc gcggcacggt cggcccgcac
     3481 cgcttcgaga tcgaattcct cgatgcgggc gtgcaggcct atgccttcac ctttggttga
     3541 accgggagga cacgatgaaa ctctcctttg aacagggtat tgctgccggt gttgccggtc
     3601 ttgtagccac cgcattgatc gccggcgtgc tgctggtcga ccacggcgcg atcgccgcac
     3661 cggtcgaagc cagcgcgcag gccaaggcgc tgccggtacc caccggcgat gcggcgttcc
     3721 gcgatgacgc cacccacgcc agcgtggtgt ttgccggcgg ctgcttctgg ggcgtgcagg
     3781 gcgtgttcca gcacgtcaag ggcgtgagca atgcggtatc cggctacatc ggtggcagcg
     3841 ccgccaacgc gcactatgag cgggtcagca gcggccagac cggtcacgcc gaagcggtga
     3901 agatcgacta cgatccgcgc caggtcagct acgggcagct gatgcaggtg ttcttctcgg
     3961 tggtgcacga cccgacccag ctcaaccgcc aggggccgga ccacggcagc cagtaccggt
     4021 cggcgatctt cagcgacgac gcgcgccagc aagccgccag ccgcgcctac atcgcccagc
     4081 tcggccaggc cggcagctac cgcgcaccga tcgtcaccca gctgggcagc ggccagcgct
     4141 tctacccggc cgagagctat caccagaact acatgacgaa ctacccgcag gcggcctaca
     4201 tccgctacta cgacgcaccg aagctggcgg cgctgggcaa gcagttcccg gcgctgtacc
     4261 ggcgcgatgc agtgctggtg ccgatgcggt aacgaccggc aatcccaacg cagaaaaaga
     4321 cgcacggcga tcccgccgtg cgcttgggaa gtatcggccg cgccccgatc aggcccgtcc
     4381 gacaacgaca tgctaggctc gccaacgtca ggggtacagc tccagttgac gggaacttcg
     4441 atggatacag atgaccagag cgcgatgatc cctccccgct accagcggct gtccgatgaa
     4501 ctggccgagg ccatccacgg cggtcgcctt cccgttggca gccgcctgcc ctcgctgcgg
     4561 cagatggcgc tgcagcgcag gctcagcctg aacaccgtga tcgcggccta tcgccagctg
     4621 gaagatgccg gcctggtgat tccacggccc aaggccggct tcgaggtcgc accgcgcctg
     4681 tcggtgcccg aacgttcgct gcgcgatacg ccgtcggcgc ccaccgcgcc gctgcagcag
     4741 gcgctgatgg cccgtgtgct ggaggcacaa cgccgacccg gcgtgatcga cctggccttc
     4801 gccggccccc gtggtcgcca gttctatccc ggggcgcagc ttgcccggca cactgcacag
     4861 gtgctgcgtc atggccagca gacggtggaa acctatgcgc gcccgaatgg ctcgccgcgg
     4921 ctgctggcac agatcgtgcg ccgcggcccg cgcatgggcc tgcacaccca cagcgaccgc
     4981 ctgctgctga cccatggcgc gatggaagcg ctgcagctgg cgctgcgtgc cgtcacccgg
     5041 tccggcgatg cggtcggcat cgaggcgccc tcctacttca acctgtatcc cctgctggcc
     5101 accctcggcc tgcaggccat cgaattgccc acccacccgc agcaggggct ggatgtcgat
     5161 gccctggagg ccctgctcga acacacggcg ctggccgcgc tggtggtgat gccgaccgtg
     5221 cacaacccgc tgggctgcac catgcccaca tccgccaagc agcgactggc cgaactggtc
     5281 aatgcacgcc agctgccgct gatcgaagat gcggtgtatg ccgagctgca gttctgcgaa
     5341 ccgcccgcgc ccctgctcaa ggccttcgat cgcgacggct gggtgatggt ggtcggtggc
     5401 ttttccaaga ccctggcgcc ggactatcgc atcggctggc tggagggtgg ccgcttcgcc
     5461 gaacgcatcg cgctgctgaa gttccagtcc accggcggcg aaccgcaact cctcggcgat
     5521 gcggtggcag cctacctgga ggcgggcagc tacgagcacc acctgcaccg catgcgtcgc
     5581 ctgtatcgcg agcaggtggg gcggctgcgt cagctggtgg ccgagcactt cccggcgggc
     5641 acccgcgcca ccgagccgca gggcggtttc ctgctgtggc tggaactgcc gggcgtggac
     5701 acgcgcgaac tgttcgaacg tgcgctgcag gaagacatcg tgttcatgcc cggccaggtc
     5761 tattcgcgcg gcgcccgcta ccggcattgc ctgcggctgt cgtgctgcca gaccctggat
     5821 gcgcgcttca tcggtgcggt ggagcgactg ggtgcgatcg cgcgcgagct
//
LOCUS       DAOKIP010000230         5838 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.231,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000230 DAOKIP010000000
VERSION     DAOKIP010000230.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 5838)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5838)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5838
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.231"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            47..841
                     /locus_tag="QEL58_003507"
     CDS             47..841
                     /locus_tag="QEL58_003507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiazole synthase"
                     /protein_id="HDS1677939.1"
                     /translation="MNVHVSPDSLVIAGKTYGSRLLTGTGKFKDLEETRLATEAAGAQ
                     IVTVAIRRTNIGQNPGEPNLLDVLPPDRYTILPNTAGCYTAEDAVRTCRLARELLDGH
                     NLTKLEVLGDQKSLYPDVVQTLKAAEQLVKDGFEVMVYTSDDPILAKRLEEIGCAAVM
                     PLAAPIGSGLGIQNKYNLLQIIEDAKVPIIVDAGVGTASDAAIAMELGCDGVLMNTAI
                     AGARSPVLMASAMRKAVEAGREAFLAGRIPRKRYASASSPVDGLIG"
     gene            841..1575
                     /gene="trmB"
                     /locus_tag="QEL58_003508"
     CDS             841..1575
                     /gene="trmB"
                     /locus_tag="QEL58_003508"
                     /EC_number="2.1.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019183926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(46)-N7)-methyltransferase TrmB"
                     /protein_id="HDS1677940.1"
                     /translation="MTNPFDSAGSKAPPKPFTVSEGRREVRSFVLRQGRFTPAQQRAF
                     DERWPRFGIDYNGQPRDLDATFGRPAHKVLEIGFGNGAALRFAAQHDPSRDYIGIEVH
                     APGVGRLLNALADDNADHVRLYHHDAVEVLQNEIADGALDEVRIYFPDPWHKKRHNKR
                     RLLQPAFAELLVRKLRPGGRLHCATDWEDYAEQMWDVLDATAGLVNRAGPRGSVPRPD
                     WRPQTHFETRGQKLGHGVWDLLYDRT"
     gene            1603..3450
                     /locus_tag="QEL58_003509"
     CDS             1603..3450
                     /locus_tag="QEL58_003509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019237329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SLC13 family permease"
                     /protein_id="HDS1677941.1"
                     /translation="MDTALTLTNDMKLVLGLVGFTMAMFLFERIRADVVALVVLVVLG
                     VTGLIAPEEIFGGFSGNAVMSIIATTILGAGLDRTGALNRLAAWLLRRGHGVEQRLLM
                     MTTAIAGLNSSFMQNPSVMALYLPVASRLAARTGLTLQRLLLPISAAIVMGGALTMVG
                     NSPLILLNDLLASANNNLPSGLATIEPLRMFAPLPIGVALLVASLLYFRYYGDRKLIE
                     EENLVNDGVTPARTESYFAKTYGIEGDVFELVVSAESPLVGMTLGEAENLHDAPLLLA
                     LKTGNDTRLAPPAEMRIWVGSVLGAMGPRQQISDFAQNQFLRMSSRLKHLGDLFNPSR
                     AGISEAVVPPTSNVIGKSAADLRLRKERGISLLAINRDKQVIREDVRDVQLRAGDMLV
                     FHSIWTDLAQAAKSRDFVVVTDYPTGEQRPHKFKIAMAIFALTILIALTSKLPVALTL
                     MTGVAGMLLTGVLRMDEAYASINWKTVFMMAGLIPLGWAMDSSGAAAWVAGHTIDKLP
                     TGIPLWVLEVALALLTTAFSLVISHVGATIVMVPIAVNLALAAGGSPTAFALIVALSA
                     SNNLMTASNPVISMITGPANYTPREMWRVGGPLSLIYTCVVVLMINLMF"
     gene            complement(3786..4121)
                     /locus_tag="QEL58_003510"
     CDS             complement(3786..4121)
                     /locus_tag="QEL58_003510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012481112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske (2Fe-2S) protein"
                     /protein_id="HDS1677942.1"
                     /translation="MTAAAALIALDAIADGAFAEVEAVVDGDAESVLLYRDGAQVRAF
                     LNICPHAGRRLDWAPGQFLKSREGHLVCAAHGASFALDSGDCIAGPCKGDRLRAVPVD
                     VRDGQVYLA"
     gene            4300..4581
                     /locus_tag="QEL58_003511"
     CDS             4300..4581
                     /locus_tag="QEL58_003511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014038280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677943.1"
                     /translation="MFNRASAFTQFRTLFAPRKPRHPLVRVAVGLLGLAILAAMVFIG
                     VFVGAAMILVGLAWKLLASRKPGTTRPVDPTVVEGEYRVVRKPVLPASR"
     gene            4657..5373
                     /locus_tag="QEL58_003512"
     CDS             4657..5373
                     /locus_tag="QEL58_003512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HDS1677944.1"
                     /translation="MSDVSDVIPAVALPRVPVVGGGSFPVHRIYCVGRNFADHAREMG
                     AVVPAADDRGRPMFFSKPADAIVVGHDDAIPYPPATANLHHEVELVVAIGRDAPAGEL
                     AVADADALVYGYAVGLDLTRRDLQAAAKDKGHPWDAAKGFDASAPISEIVHAAEVGDL
                     AALNLSLEVNGEVRQQALLDQMIWNVPEILHELSKLWQLRAGDLVFMGTPSGVAALKP
                     GDRFSARLENVAERHGVIAG"
     gene            5429..5833
                     /gene="mscL"
                     /locus_tag="QEL58_003513"
     CDS             5429..5833
                     /gene="mscL"
                     /locus_tag="QEL58_003513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012511949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="large-conductance mechanosensitive channel
                     protein MscL"
                     /protein_id="HDS1677945.1"
                     /translation="MGMLTEFKEFAMRGNVIDLAVGVVIGAAFGKIVTALVEKIIMPP
                     LGLLIGKVDFSQLAWTLSPASIGADGKEIPAVVIGYGDFINTLIQFVIVAFAIFLVVK
                     TINRLSRKQEAAPAAPAEEVVLLREIRDSLKK"
BASE COUNT          967 a         1974 c         1913 g          984 t
ORIGIN      
        1 ttggttgcgt gaccccatct tcaggcggat aagcgataat cgcgccatga acgttcatgt
       61 ctcccccgat tcgctggtga tcgccggcaa gacctatggc tcgcggctgc tgaccggcac
      121 cggcaagttc aaggacctgg aagaaacccg cctggccacc gaggctgcag gcgcccagat
      181 cgtcaccgtg gccatccgcc ggaccaacat cggccagaac ccgggcgaac cgaacctgct
      241 ggacgtgctg ccgccggacc gctacaccat cctgcccaac accgccggct gctacaccgc
      301 cgaggacgcc gtgcgcacct gccgcctggc ccgtgagctg ctggacggcc acaacctgac
      361 caagctggaa gtgctgggcg accagaagtc gctgtacccg gacgtggtgc agaccctcaa
      421 ggccgccgaa cagctggtca aggacggctt cgaggtgatg gtctacacct ccgacgaccc
      481 gatcctggcc aagcgcctgg aagagatcgg ctgcgctgcg gtgatgccgc tggccgcgcc
      541 gatcggctcg ggcctgggca tccagaacaa gtacaacctg ctgcagatca tcgaagacgc
      601 caaggtgccg atcatcgtcg acgccggcgt cggcaccgcc tcggacgcag cgatcgcgat
      661 ggagctgggc tgcgacggcg tgctgatgaa caccgccatc gccggcgcgc gcagcccggt
      721 gctgatggcc agcgcgatgc gcaaggcggt cgaagccggc cgcgaggcgt tcctggccgg
      781 gcgcatcccg cgcaagcgct acgccagcgc ctcctctccg gtggatgggc tgatcggctg
      841 atgaccaatc ctttcgacag cgccggctcc aaggccccgc ccaagccctt caccgtcagc
      901 gaaggccgcc gtgaagtacg cagcttcgtg ctgcgccagg gccgattcac ccccgcccag
      961 cagcgtgcgt ttgacgaacg ctggccgcgt ttcggcatcg actacaacgg ccagccgcgc
     1021 gatctggacg cgaccttcgg ccgcccggcg cacaaggtgc tggaaatcgg cttcggcaac
     1081 ggtgccgcgc tgcgcttcgc ggcccagcac gacccgtcgc gtgattacat cggcatcgag
     1141 gtgcatgcgc ccggcgtggg ccggctgctg aacgcgctgg ccgacgacaa cgccgaccac
     1201 gtgcgcctgt accaccacga tgcggtggaa gtgctgcaga acgagatcgc cgacggcgcg
     1261 ctggatgaag tgcgcatcta cttcccggac ccgtggcaca agaagcgcca caacaagcgc
     1321 cgcctgctgc agccggcgtt cgccgaactg ctggtgcgca agctgcgccc gggcggccgc
     1381 ctgcactgcg cgaccgactg ggaagactac gccgagcaga tgtgggacgt gctcgacgcc
     1441 accgccggcc tggtcaaccg tgccggcccg cgcggcagcg tgccgcgccc ggactggcgc
     1501 ccgcagaccc acttcgagac ccgcggccag aagctcggcc atggcgtctg ggacctgttg
     1561 tacgaccgca cctgatgatc gcctgaggac atcgcgcccc acatggatac cgcgctgacg
     1621 ctgaccaacg acatgaagct cgtgcttggg ctggtcggct tcacgatggc gatgttcctg
     1681 ttcgagcgca tccgcgccga cgtggtcgcg ctggtggtgc tggtggtgct tggtgtcacc
     1741 gggctgatcg cgccggagga gatcttcggc ggtttctccg gtaacgcggt gatgagcatc
     1801 atcgccacca ccatcctcgg tgcgggcctg gaccgcaccg gggcactgaa ccgactggcc
     1861 gcctggctgc tgcggcgcgg ccacggcgtc gagcagcggc tgctgatgat gaccacggcc
     1921 attgccggcc tgaactcgtc cttcatgcag aacccgtcgg tgatggcgct gtacctgccg
     1981 gtcgcctcgc gactggccgc gcgcaccggg ctgaccctgc agcgcctgct gctgccgatc
     2041 tcggcggcga tcgtgatggg cggcgcgctg accatggtcg gcaactcgcc gctgatcctg
     2101 ctgaacgacc tgctggcctc ggccaacaac aacctgccct cgggcctggc caccatcgag
     2161 ccgctgcgca tgttcgcgcc gctgccgatc ggcgtggcgc tgctggttgc ctcgctgctg
     2221 tacttccgct actacggcga ccgcaagctg atcgaggaag agaacctggt caacgacggg
     2281 gtcaccccgg cacgtaccga aagctacttc gccaagacct acggcatcga aggtgatgtg
     2341 ttcgagctgg tggtcagcgc cgaaagcccg ctggtgggca tgaccctggg cgaggcggag
     2401 aacctgcacg atgcaccgct gctgctggcc ctgaagaccg gcaacgacac ccgcctggca
     2461 ccgcctgcgg agatgcgcat ctgggttggc agcgtgctgg gtgcgatggg cccgcgccag
     2521 cagatcagcg atttcgcgca gaaccagttc ctgcgcatgt cctcgcgcct gaagcacctg
     2581 ggcgacctgt tcaaccccag ccgcgccggc atttccgagg cggtggtgcc gccgacctcg
     2641 aacgtgatcg gcaagagcgc ggccgacctg cgcctgcgca aggaacgcgg catcagcctg
     2701 ctggcgatca accgcgacaa gcaggtgatc cgcgaagacg tgcgcgacgt gcagttgcgt
     2761 gcgggcgaca tgctggtctt ccacagcatc tggaccgacc tggcacaggc cgccaagagc
     2821 cgggacttcg tggtggtgac cgattacccg accggcgagc agcgcccgca caagttcaag
     2881 atcgcgatgg cgatcttcgc gctgaccatc ctgatcgcgc tgaccagcaa gctaccggtg
     2941 gcgctgaccc tgatgaccgg cgtggccggc atgctgctga ccggcgtgct gcgcatggac
     3001 gaggcctatg cctcgatcaa ctggaagacg gtgttcatga tggccgggct gattccgctc
     3061 ggctgggcaa tggactccag tggcgcggcg gcatgggtgg ccggccatac catcgacaag
     3121 ctgcccaccg gcattccgct gtgggtgctg gaggtggcgc tggcgttgct gaccaccgcg
     3181 ttctcgctgg tgatcagcca tgtgggtgcg accatcgtga tggtccccat cgcggtgaac
     3241 ctggcgctgg ctgccggcgg cagcccgacc gcattcgcgc tgatcgtggc gctgtcggcg
     3301 tccaacaacc tgatgacggc ctccaatccg gtgatctcga tgatcaccgg tccggccaac
     3361 tacaccccgc gcgagatgtg gcgggtcggc ggcccgctgt cgctgatcta cacctgcgtg
     3421 gtggtgttga tgatcaacct gatgttctga gggtggggtt cattggcagg gctgcgccct
     3481 gcacccgcag aagcaacgtc aacatcaaaa gctggcttcc tgtgggatgc cggggtaggt
     3541 ccggttgcgg gggacgctgc aagtacgtcc atgtaagctc ggtcgccgca tccatgcggc
     3601 tcacgccccc gcaaccagac ccaccccgcc ttcgatagat ttctacgatc tgccagaacg
     3661 gcgtcgtgca ccgctctggt aggtgtcgac cttggtcgac acggtagacc catgccatgc
     3721 gtggatgaat ctctggatac ccattgatcc tgtgggtgcg aaccttggtt cgcacgccgg
     3781 ttgcctcagg ccagatagac ctgcccgtcg cgcacatcca ctggcacggc ccgcaggcgg
     3841 tcgcccttgc acgggccggc gatgcagtcg ccgctgtcca gcgcgaacga agcgccatgt
     3901 gccgcgcaca ccaggtggcc ctcgcggctc ttcaggaact ggcccggcgc ccagtccagg
     3961 cggcggccgg catgcggaca gatgttcagg aaggcacgca cctgcgcgcc gtcgcgatac
     4021 agcagcaccg actcggcatc gccatcgacc accgcttcga cctcggcaaa cgcgccatcg
     4081 gcaatggcat caagggcgat cagggcagca gcggcagtca tggcgaaggc tcggacagta
     4141 aagcggcatt gtcgcacgcc tgctcaggtg actggctgca agatgaacac aagtcattga
     4201 ttcgtaataa gcacaggcta tatttaacga gtttttcact caatgacagt ggcgcgtccc
     4261 gatactctgt tttcgctgat cccagcctat cgagccgcca tgttcaatcg cgcatccgcc
     4321 ttcacccagt tccgcaccct gttcgcgccg cgcaagccgc gtcatccgtt ggtgcgcgtt
     4381 gccgtgggcc tgctcggcct ggcgatcctg gccgcgatgg tgttcatcgg cgtgttcgtc
     4441 ggtgcggcga tgatcctggt cggcctggcg tggaagctgt tggcctcgcg caagccgggc
     4501 accacccgtc cggtcgatcc gaccgtggtc gagggcgagt accgcgtggt gcgcaagccg
     4561 gtgttgccgg cctcgcgttg atccatgcct tccgcgcccg ctgacggcgg gcgccatgcg
     4621 ttctagactg cgggcacgcc cttcctggat gcccgcatgt ccgatgtctc cgatgtgatc
     4681 cctgccgttg ccctgccgcg tgtgccggtc gtgggcggcg gcagtttccc cgtgcaccgc
     4741 atctactgcg tgggccgcaa cttcgccgac catgcccgtg aaatgggcgc ggtggtgccg
     4801 gccgccgatg accgcggccg cccgatgttc ttcagcaagc cggccgatgc gatcgtggtc
     4861 ggccatgacg atgccattcc ctatccgccg gcgactgcca acctgcacca cgaagtggaa
     4921 ctggtggtgg cgatcggccg tgacgcgccg gccggcgagc tggccgtggc tgatgccgat
     4981 gcactggtct acggctatgc cgtcggcctg gacctgaccc gccgcgatct gcaggcggcc
     5041 gccaaggaca agggccaccc gtgggatgcc gccaagggct tcgatgcctc cgcgccgatc
     5101 agcgagatcg tgcatgccgc cgaggttggt gacctggccg cgctgaacct gtcgctggag
     5161 gtcaacggcg aagtgcgcca gcaggcattg ctcgaccaga tgatctggaa cgtgccggag
     5221 atcctgcatg agctgtccaa gctgtggcag ctgcgcgccg gcgacctggt gttcatgggc
     5281 accccgtccg gggtggccgc gctgaagccc ggcgaccgct tcagtgcccg cctggaaaac
     5341 gtggccgagc gccacggcgt gatcgccggc tgacatcacc tgcgctaccc tgcgcgctgt
     5401 ccacttcccc caccggagaa aaacaacaat gggaatgctc accgagttca aggaattcgc
     5461 gatgcgcggc aacgtcatcg acctcgccgt cggcgtggtg atcggcgcgg ccttcggcaa
     5521 gatcgtgacc gcgctggtcg agaagatcat catgccgccg ctgggcctgc tgatcggcaa
     5581 ggtggacttc tcgcagctgg cctggacgtt gtcaccggcc agcatcggtg ccgacggcaa
     5641 ggagatcccg gcggtggtga tcggctatgg cgacttcatc aatacgctga tccagttcgt
     5701 gatcgtggcc ttcgccatct tcctggtggt gaagacgatc aaccgcctgt cgcgcaagca
     5761 ggaagccgcc ccggccgcac cggccgagga agtggtgctg ctgcgcgaga tccgcgacag
     5821 cctgaagaaa taagatcg
//
LOCUS       DAOKIP010000231         5806 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.232,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000231 DAOKIP010000000
VERSION     DAOKIP010000231.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 5806)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5806)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5806
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.232"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            154..1950
                     /locus_tag="QEL58_003514"
     CDS             154..1950
                     /locus_tag="QEL58_003514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor"
                     /protein_id="HDS1677946.1"
                     /translation="MLCRMQPKKYALPLMVLSLAATSVAHARGTIDKVDIKGLDKGDD
                     AAIIENIQESLSLYDTIGKEQGESRLEYLLSQAERQTRQALEPFGYYNPVIKVEAPRV
                     DEHVRVLIHVDKGAPVTVRREHIDITGPAIYDQYLQDDLAAFKPRKGQRFVHTQYEAS
                     KITITRRLAERGYFDADYTQRQVQITRADNAADIDLTWDSGRRYNMGPVRFEQDYFVD
                     KLFDPLVYWDQGSYYHEGKLDRLRQSLTKLDYFSVIDIQPRPDQADANGDVPVDVKLT
                     RAKRTIYTAGLSYGSESGPGVRGGIERRFLNNRGHKMNTQLDYAQKRKSLVTSYRIPA
                     FNWLDGWYTFAASAYDEQTDYIDLRNFKLIASRSGEINEHWTAIASVNALRERWRYAS
                     GTEFTDAVYNTSTLVYPQMVADYVNVDDQMFPRKGISGTATLRTGIEGVGSDTSFVQA
                     NAVLRWYIPVGESNRLILRGEGGTTWTSDLVAMPPSLRYFAGGDRSIRGYAYREVGPR
                     TPAPDKYALGAKNLVIGSAEYEHYFNGGPWGAAVFVDTGSAFDNTIDLHTGVGFGVRW
                     KSPVGPVRIDVAHGLNNPDSQFQLYLNIGADL"
     gene            1947..>5806
                     /locus_tag="QEL58_003515"
     CDS             1947..>5806
                     /locus_tag="QEL58_003515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017156059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translocation/assembly module TamB"
                     /protein_id="HDS1677947.1"
                     /translation="MSTPAPTPTPNTPPRVRFYRRRRFWAWSGAGVIGLVLLALLAVY
                     WLLQTVAGRDVLLAQVVARLPVGASFTWDKVDGPVAGPLTLYNVDFRYDDIHFHAERA
                     HLEPDLRPLLGRKLLLDKLELTNATLNLAKSDEPFKLPSWPDSLPQIEMPLAIQADAI
                     AIDGFRISQANEPVIDISRVRGGIEIANGEFQAHKLVVDSDMGNFTAQGRYIPAKDYD
                     TDVTVTAVLPAPRGRTAATVGLVARGDLAHMEVAVAGRAPKPLHAMLVFDGRTDPSWN
                     ASIRSDELDLALLSPALVSSAIAPLALDFTAAGKGGNANLRGKVKQGDQELELAPSVV
                     SLQDQVLKVSPLLVKGLGGEARLEGTADFSQEDQQKLNFSVVARNLTYVPAADPNTAG
                     SAPVPVTLKEARFGLAGTLKAWAAIGRAEVEREKQKAQLRFDVRGNDQAASIHQLQAQ
                     TPGGQLQVEGQVAWAPQLDWDAKATLKDFDPGYFVPGWNGRLSGNLASKGRQLPPPAN
                     AAPGTAGTLEATVDLPSLKGILRQRNLDAQGKFALQGDQGQGDLKLSLGSSRVTASGK
                     VGDRLDIDARFEPLQLSDLLPGADGGLRGQVQVKGPRDAPDITADLIGNNLNWDGYGA
                     ESVSIKGHLPWRGDSGTLAVQGQQVNAGMLLERLNIDAQGSVSNLRLAAQTRNDMGAI
                     ELQGSVRQQGAQWRGELASLRIAPVKGDAWSLRAPAAFAINGSTYTLSEACLAAASSG
                     ALCAQANWPREGLVVRSDALALALVQPWLPPQSGRRIYLRGDVSLDAQIRPRGNAWEG
                     HVEVRSKEGGVRLGENRTTVGDASRGELVRYDQFSLKLDMTPASIKGYLGMGFQGNGF
                     VDAKMQTGWEASAPLNGELYLNMSRLYWLELFSPDIVRPTGLIEGHVSLRGTRGQPSL
                     GGDAQLSNFKGEFPALGLTFDQGKGSFVAQPDGSARITAQANSGQGTLYVDGGLSWFG
                     DAQPLQLKIHGDNVLLSNTSELRIVANPNLDFTLAKAAMELRGTVHVPEADIDLERLD
                     RGTSVSEDVVVLDPVDPEESRTSPLDMDLTVSLGDKVKMTGFGLKGALTGKMQVWAKP
                     GREMTANGGLEVSGRYKAYGQDLTITRGNLTWNYNAVSDPRINIRAERRVGDVTAGID
                     VTGRAQQPRADVWSEPAMSQSEALAYLVLGRSLTGASSDQTQQVNAASAALSAGSGLL
                     ASQLGAKLGLDDAGVSQSRALGGSVIGVGKYISPKLYVGYGVSLVGAGSVITLKYLLR
                     RGFDVEVESSTVENRGSINWRREK"
BASE COUNT         1030 a         1912 c         1990 g          874 t
ORIGIN      
        1 ggatgtccat cggggtcatt gccggcatcg cggacgatgc cggcttcctc atcggcattc
       61 acgatgatcg ccacaaaggc gcgtattttg accgccactt aacaaccgat cccgaatgac
      121 gtgatgcatt tcgcatcgtc acctccggtc ggtatgctgt gccgcatgca gccaaagaaa
      181 tacgccctgc cgctgatggt cctgtcgttg gccgccactt ccgtggccca cgcgcgcggc
      241 accatcgaca aggtggacat caagggattg gacaagggcg acgacgccgc aatcatcgag
      301 aacatccagg aatcgctgtc gctgtacgac acgatcggca aggagcaggg cgagtcgcgc
      361 ctggagtacc tgttgtcgca ggccgagcgg cagacccgcc aggcactgga accgttcggg
      421 tactacaacc cggtgatcaa ggtcgaggcg ccgcgcgtgg acgagcacgt gcgcgtgctg
      481 atccatgtcg acaagggtgc gccggtcacc gtgcgccgcg agcacatcga catcaccggc
      541 ccggcgatct acgaccagta cctgcaggac gacctggctg cgttcaagcc gcgcaagggc
      601 cagcgcttcg tgcataccca gtacgaagcc agcaagatca ccatcacccg ccgcctggcc
      661 gaacgtggct acttcgacgc cgactacacc cagcgccagg tgcagatcac ccgcgccgac
      721 aatgctgcag acatcgacct gacctgggac agtggccgcc gctacaacat gggcccggtg
      781 cgtttcgaac aggactactt cgtcgacaag ctgttcgacc cgctggtgta ctgggaccag
      841 ggcagctact accacgaggg caagctggat cgcctgcggc agtcgttgac caagctggac
      901 tatttcagcg tgatcgacat ccagccgcgt ccggaccagg ccgacgcgaa cggcgacgtg
      961 ccggtggacg tgaagctgac ccgcgccaag cgcaccatct acaccgccgg cctgagctac
     1021 ggcagcgaga gcggcccggg tgtgcgcggt ggcatcgagc ggcggttcct gaacaaccgc
     1081 ggccacaaga tgaacacgca gctggactat gcgcagaagc gcaagagcct ggtcaccagc
     1141 taccgcatcc cggcgttcaa ctggctcgac ggctggtaca ccttcgccgc cagcgcgtat
     1201 gacgaacaga ccgattacat cgacctgcgc aacttcaagc tgatcgccag ccgcagcggc
     1261 gagatcaacg agcactggac cgcgatcgcc tcggtcaacg cgctgcgcga gcgctggcgc
     1321 tacgcctccg gcaccgaatt caccgatgcg gtctacaaca cctcgacgct ggtgtacccg
     1381 cagatggtgg ccgactacgt caacgtcgac gaccagatgt tcccgcgcaa gggcatcagc
     1441 ggcaccgcga cgctacggac cggcatcgag ggcgtcggtt cggataccag cttcgtgcag
     1501 gccaatgccg tgctgcgctg gtacatcccg gtgggcgaaa gcaaccgcct gatcctgcgc
     1561 ggcgagggcg gcaccacctg gaccagcgac ctggtggcga tgccaccgag cctgcgctac
     1621 ttcgccggcg gcgaccgcag catccgcggc tacgcctacc gcgaggtcgg cccgcgtacg
     1681 ccggcgccgg acaagtacgc actgggcgcc aagaacctgg tgatcggctc ggccgagtac
     1741 gagcactact tcaatggcgg tccatggggc gcggcggtgt tcgtcgatac cggcagcgcc
     1801 ttcgacaaca ccattgatct gcacactggc gtcggcttcg gcgtgcgctg gaaatcgccg
     1861 gtcggcccgg tacgcatcga cgtggcgcac ggcctgaaca acccggattc gcagttccag
     1921 ctgtacctga acatcggagc ggacctgtga gcacgcccgc acccacgccg accccgaaca
     1981 cgccgccgcg cgtgcgcttc taccgccggc gccgcttctg ggcatggtcc ggcgccggcg
     2041 tgatcggcct ggtgctgctg gccctgctgg cggtgtactg gctgctgcag accgtggccg
     2101 gccgcgatgt gctgctggcg caggtggtgg cacggctgcc ggtgggcgcc agcttcacct
     2161 gggacaaggt ggacggcccg gtggccggtc cgctgaccct gtacaacgtc gacttccgct
     2221 atgacgacat ccatttccac gccgagcgcg cgcacctgga gccggacctg cgcccgttgc
     2281 tgggccgcaa gctgctgctg gacaagctgg aactgaccaa cgcgacgttg aacctggcca
     2341 agagtgacga gccgttcaag ctgccgtcgt ggccggattc gctgccgcag atcgagatgc
     2401 cgctggcgat ccaggccgac gccattgcca tcgatggctt ccgcatcagc caggccaacg
     2461 agccggtgat cgacatcagc cgcgtgcgcg gtggcatcga aatcgccaac ggcgaattcc
     2521 aggcgcacaa gctggtcgtg gacagcgaca tgggcaattt caccgcccag ggccgctaca
     2581 tcccggccaa ggactacgac accgacgtga cggtcacggc ggtgctgccg gccccgcgtg
     2641 ggcgcactgc ggcgacggtc gggctggtgg cacgcggcga ccttgcgcac atggaggtgg
     2701 cggtggccgg gcgtgcaccg aagccgctgc atgcgatgct ggtgttcgac gggcggaccg
     2761 atccgagctg gaatgccagc atccgcagtg acgaactgga tctggcgctg ttgtcgccgg
     2821 cattggtcag ctcggcgatc gcgccgctgg cactggactt cactgccgcc ggcaagggcg
     2881 gcaacgccaa cctgcgcggc aaggtgaagc agggcgacca ggaactggaa ctggcaccgt
     2941 cggtggtgtc gctgcaggac caggtgctga aggtctcgcc gctgctggtg aagggcctgg
     3001 ggggcgaagc ccggctggag ggcaccgccg atttcagcca ggaagaccag cagaagctca
     3061 atttctcggt ggtcgcgcgg aacctgacct atgtgccggc cgcggacccg aacaccgccg
     3121 gcagcgcgcc ggtaccggtg acgctgaagg aagcgcgctt cggcctggcc ggcacgctga
     3181 aggcgtgggc ggcgattggc cgcgccgagg tcgaacgcga aaagcagaag gcgcagctgc
     3241 gcttcgacgt gcgtggcaat gaccaggccg cgtcgatcca ccagctgcag gcgcagaccc
     3301 cgggtggcca gctgcaggtg gaaggccagg tcgcttgggc gccacagctg gactgggacg
     3361 ccaaggccac gctgaaggac ttcgaccccg gctatttcgt gccgggctgg aatggccgcc
     3421 tgtccggcaa cctggcctcc aagggccgcc agctgccgcc gccggccaat gccgcaccgg
     3481 gcacggccgg cacgctggaa gccacggtgg acctgccgtc gctgaagggc atcctgcgcc
     3541 agcgcaacct cgacgcacag ggcaagttcg cgctgcaggg cgatcaaggc cagggcgacc
     3601 tgaagctgtc gctgggcagc agccgggtca ccgcttcggg caaggtcggt gatcgtctcg
     3661 acatcgatgc acgcttcgaa cctttgcagc tgagcgatct gctgccgggc gccgatggtg
     3721 gcctgcgtgg ccaggtgcag gtgaagggcc cgcgcgatgc gccggacatc accgccgacc
     3781 tgatcggcaa caacctcaac tgggatggct acggcgccga gagcgtaagc atcaagggcc
     3841 acctgccgtg gcgcggcgac agcggcacgc tggcggtgca gggccaacag gtcaacgccg
     3901 gcatgctgct ggaacggctg aacatcgacg cgcagggcag tgtgtccaat ctgcggctgg
     3961 ccgcgcagac ccgcaacgac atgggcgcga tcgagctgca gggcagcgtg cgccagcagg
     4021 gcgcgcagtg gcgtggcgag ctggcatcgc tgcgcatcgc accggtgaag ggcgatgcct
     4081 ggtcgctgcg tgcgccggcc gcgttcgcga tcaacggcag cacctacacc ctgtccgaag
     4141 cctgcctggc cgccgccagc agtggcgcgc tgtgcgccca ggcaaactgg ccgcgcgagg
     4201 gcctggtggt gcgcagtgat gcgctggcgc tggcgctggt gcagccatgg ctgccgccgc
     4261 agtccggccg ccgcatctac ctgcgcggtg atgtcagcct ggacgcgcag atccgcccgc
     4321 gcggcaatgc ctgggaaggc catgtggaag tgcgctcgaa ggaaggcggc gtgcgcctgg
     4381 gcgagaaccg caccacggtg ggcgatgcgt cccgtggcga gctggtgcgc tatgaccagt
     4441 tctcgctgaa gctggacatg accccggcca gcatcaaggg ctacctgggt atgggcttcc
     4501 agggcaacgg cttcgtcgat gccaagatgc agaccggctg ggaagccagc gcgccgttga
     4561 acggtgagct ctacctcaat atgtcgcggc tgtactggct ggagctgttc tcgccggata
     4621 tcgtgcgccc gaccggtctg atcgaagggc acgtcagtct gcgcggcacg cgtggccagc
     4681 cgtcgctggg cggtgatgcg cagctgagca acttcaaggg tgaattcccg gcgctgggcc
     4741 tgaccttcga ccagggcaag ggcagcttcg tggcccagcc tgatggctcg gccaggatca
     4801 ccgcgcaggc caattccggc cagggcacgc tgtacgtgga tggcggcctg tcgtggttcg
     4861 gtgatgcaca gccgctgcag ctgaagatcc acggtgacaa cgtgctgctg tccaacacca
     4921 gcgaactgcg catcgtcgcc aatcccaacc tcgatttcac cctggccaag gcggcaatgg
     4981 agctgcgtgg caccgtgcat gtgccggagg ccgatatcga cctcgaacgc ctggaccgcg
     5041 gcacctcggt gtctgaagac gtggtggtgc tcgatccggt cgatccggaa gagtcgcgca
     5101 cctcgccact ggacatggac ctgacggtca gcctcggcga caaggtgaag atgaccggct
     5161 tcggcctgaa gggcgcgctg accggcaaga tgcaggtctg ggccaagccc ggccgcgaga
     5221 tgaccgccaa cggtggcctg gaagtgagcg ggcgctacaa ggcgtatggg caggacctga
     5281 ccatcacccg cggcaacctg acctggaact acaacgcggt gtccgacccg cgcatcaaca
     5341 tccgcgccga gcgccgggtc ggtgatgtca cggccggcat cgacgtcacc gggcgtgcgc
     5401 agcagccgcg tgcggacgtg tggtccgagc cggcgatgtc gcagtccgag gcgctggcct
     5461 acctggtgct gggccgcagc ctgaccggcg ccagcagcga ccagacccag caggtcaacg
     5521 cggcctcggc ggcactctct gcaggcagtg gcctgctggc ctcgcagctg ggcgccaagc
     5581 tgggcctgga cgacgccggc gtgagccagt cgcgcgcgct gggtggctcg gtgatcggcg
     5641 tcggcaagta catctcgccc aagctgtacg tcggctacgg cgtgtcgctg gtcggtgccg
     5701 gttcggtgat cacgctgaag tacctgctgc gccgcggctt cgacgtggaa gtggaatcga
     5761 gcacggtgga aaaccgcggt tcgatcaact ggcgacggga gaaata
//
LOCUS       DAOKIP010000232         5780 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.233,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000232 DAOKIP010000000
VERSION     DAOKIP010000232.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 5780)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5780)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5780
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.233"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(12..2873)
                     /locus_tag="QEL58_003516"
     CDS             complement(12..2873)
                     /locus_tag="QEL58_003516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017355114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDS1677948.1"
                     /translation="MRLGLLPAGIALALAPAFASAQEAKATTDLDRISVTGSRIRQAS
                     METAQPVIALQRADIEKQGFTSVGDIVQNLSATGSPAISRADALTSGEEVGGQYVDLR
                     GLGPERTLVLLDGKRMGVSTGGYTDLAAIPTSVVERIEVLTDGASAIYGSDAIAGVIN
                     IITRKNFDGLEASVYGGQYGQGDGEKQVYNFVYGQTGERGSITFGAEYSKEDPVWAKD
                     RSFSRYPNGRFHPNPTDSDANGWSPASNHGVLIDDMGTPKDANDDVWYTRGNNGSGNT
                     MADFREFGTADYTNASQEMWLQNKLTRRSVFANGNYDLTDNIRATANVLYTKRTATQQ
                     IAGYPYQSEVYGTPLSADSIYNPLGKDAEFIRRTSEVPRQTESEQETFRFSAGLEGSF
                     EFGDKFWDWDVGYVYNQNKGVKTGTGNLFIPNVQNAVGPSFMDGDVARCGTPGHVIAG
                     CTPWNPLAPYGSTGNGSLADPALQAYLYLPSHDTYTNTTKAYSANIGGSLFSLPAGEL
                     AIAAGYEHREESGEYNPDALLQSGLSTDLAGKPTKGSYKLDEFYVELNVPVLADMPFA
                     KELSLDMAGRYSDYNTFGDTINSKFGLKWKPIDDLLVRATYSTGFRAPSISNMYGGTS
                     QTFDAYTDPCDSSFGSAARNPSVAAACQAGGVPANFRQITSGGAQSTGPGTQSYSAFE
                     SGSNPELKPETSKTWTAGLVYSPNFVQGLDVSLDWWKIRINNVIAAESVTSILNQCYV
                     LGVASACERFERGTDGRTVNQVVDVTRTLINGGYQETAGYDLGVKYRLPEFSFGKFVI
                     DWKTTYVDYLEYKRDNEAETPVEQHTSWATGDWGANFRVRSNLNVDWTLGNLGVNWGV
                     RYYSGMKEPCSYDTECNLPDFTSAYTLGQPSRKVGSNTFHDVQVRYNLPWQATVSLGA
                     NNVFNHEGPVMYSQPNSSFSYYGGFDIGRFYYMKYTQRF"
     gene            complement(2944..3843)
                     /locus_tag="QEL58_003517"
     CDS             complement(2944..3843)
                     /locus_tag="QEL58_003517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008573718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDS1677949.1"
                     /translation="MRQLSLADRGQTVSLDKSLDEGTPTCLGVARLGSLQTAGSSFTV
                     WMQVRGSSWVEAKEGRFRLRQGEWIAFEKESRPLVQAGRNGLCVGLNLNIEALRVLTE
                     MADCGLYAGRGRLNRSDARVGLRLWRDALASGQPAHALRPLLLHLASLQRGLAENVQR
                     CPGRSRSRKRQVFGRMQRARLYLEGNSHRVVRIGELAELTNFSSWYLSKTFQSLYEES
                     PQSLSARLRLERAADLLRDTDMMVGEVAAASGFDNCCSFARAFRARYGQSASRFRENG
                     GVLPPHSAKSLVGSRKYSVATQS"
     gene            complement(3959..>5780)
                     /locus_tag="QEL58_003518"
     CDS             complement(3959..>5780)
                     /locus_tag="QEL58_003518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012481193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="PD40 domain-containing protein"
                     /protein_id="HDS1677950.1"
                     /translation="GLLMLAAVIVLTMLLLRRAPVASSPVDAAVENGVRVIGSPQRPY
                     RLITATSGFETYPTLSPDGSQVAYEGANEDGKGGGAIKVQTSGNAPARQLLAPPVGAS
                     DRFPSWSPDGREIAFARFSAEGGCQVLIASATGGALRQATRCDGTELLSFDWTPDGRG
                     LVFGSMVGRYAHRGIRVLDLASGQWNALDYSVDADDFDYAPRYSPDGKWLVFVRNPQM
                     GDLWRMPASGGVPEQLTNEAAEQRGWAWVDDGRTIVFGRRVDSEVRLYYLDVERRTLR
                     DAGLDDAQWPAVSRHGGVLAFVHRRAQFGVFKVPTDGGSAQRLFASSGRDGQPMAAPD
                     GRQLVFTSDRSGSFALWWADMQRPDSLRPIEGLRPEGRQAPDWAADSRHLLVVGRDEH
                     GRTVIYEISPRDERLQALPVPAEQPLQALYGATEDQLLVVERDADQRTRLSLFDRSTQ
                     PWRRLASIEGVSQARFDRGSGRVLFTRLAAGGLWSVDPALSSASVRQISEDRPSRWRY
                     RTWTVAGSGAVGYLGTSTRCGTTLVRIEAGVEAPERCLDAQRLSAGNGISASADGRDL
                     YVALAVSDGADIGVMQLPKPAPTLFPAFSRLLIFKKNFSS"
BASE COUNT          986 a         1913 c         1893 g          988 t
ORIGIN      
        1 acttcgatcg atcagaagcg ctgggtgtac ttcatgtagt agaagcgacc gatatcgaag
       61 ccaccgtagt aggagaagct cgagttcggc tggctgtaca tgaccgggcc ttcgtggttg
      121 aacacgttgt tggcaccgag cgagacagtg gcctgccacg gcaggttgta acgcacctgc
      181 acgtcgtgga aggtgttcga accgaccttt cggctcggct ggcccagggt ataggccgag
      241 gtgaagtcag gcaggttgca ctcggtatcg taggagcacg gctccttcat gcccgagtag
      301 taacgcacgc cccagttcac gcccagattg cccagggtcc agtcgacatt gaggttcgaa
      361 cggacgcgga agttggcacc ccaatcgccg gtcgcccagc tggtgtgctg ctcgaccggg
      421 gtttcggcct cgttgtcacg cttgtactcg aggtaatcga cgtaggtggt cttccagtcg
      481 atgacgaact tgccgaagga gaactccggc aggcggtact tgacgcccag gtcgtaacct
      541 gcggtttcct ggtaaccacc gttgatcagg gtacgggtga cgtcgaccac ctggttgacg
      601 gtgcggccgt cggtgccgcg ttcgaaacgc tcacacgccg acgccacgcc cagcacgtag
      661 cactggttga ggatcgaggt caccgactcg gcggcgatca cgttgttgat gcggatcttc
      721 caccagtcca ggctgacgtc caggccctgc acgaagttcg ggctgtacac caggcctgcg
      781 gtccaggtct tggaggtttc cggcttcagt tccgggttgg agcccgactc gaaggcgctg
      841 taggactggg tgcccgggcc ggtcgactgc gcaccgccgg aggtgatctg gcggaagttg
      901 gccggaacgc cgcccgcctg gcaggctgcg gcaaccgacg ggttgcgcgc ggccgagccg
      961 aagctgctgt cgcacggatc ggtgtaggcg tcgaaggtct gcgacgtgcc accgtacatg
     1021 ttggagatgc tcggggcgcg gaagccggtc gagtaggtcg cacgcaccag caggtcgtcg
     1081 atcggcttcc acttcaggcc gaacttgctg ttgatggtgt caccgaaggt gttgtagtcc
     1141 gagtagcggc cggccatgtc gagcgacagc tccttggcga acggcatgtc ggccagcacc
     1201 ggcacgttca gttcgacgta gaactcgtcg agcttgtagc tgcccttggt cggcttgccg
     1261 gccaggtcgg tgctaaggcc cgactgcagc agcgcatccg ggttgtactc gccgctttct
     1321 tcgcggtgct cgtaaccggc cgcgatggcc agctcaccgg ccggcagcga gaacagcgag
     1381 ccaccgatgt tggcgctgta ggccttggtg gtattggtgt aggtatcgtg gctcggcagg
     1441 tacaggtagg cctgcagggc cggatcggcc agcgagccgt tgccggtcga gccgtacggt
     1501 gccagcgggt tccacggggt gcagccggcg atgacgtggc ccggggtgcc gcaacgggca
     1561 acgtcgccgt ccatgaagga cgggccgacc gcattctgca cgttcgggat gaacaggttg
     1621 ccggtgccgg tcttcacgcc cttgttctgg ttgtagacgt aacccacgtc ccagtcccag
     1681 aacttgtcgc cgaactcgaa cgaaccttcc aggccggccg agaagcggaa ggtctcctgc
     1741 tcggattcgg tctggcgcgg cacttcggag gtacgacgga tgaattccgc gtccttgccc
     1801 agcgggttgt agatgctgtc ggccgacagc ggggtgccgt agacctcgga ctggtacggg
     1861 tagccggcga tctgctgggt ggccgtacgc ttggtgtaca gcacgttcgc ggtggcgcgg
     1921 atgttgtcgg tcaggtcgta gttgccattg gcgaacaccg aacgacgggt cagcttgttc
     1981 tgcagccaca tttcctggct ggcattggtg tagtcagccg tgccgaactc gcggaaatcg
     2041 gccatggtgt tgcccgagcc gttgttgcca cgggtgtacc agacgtcgtc gttcgcgtcc
     2101 ttcggggtgc ccatgtcatc aatcagcacg ccgtggttgg acgccggcga ccagccgttg
     2161 gcatccgaat cggtcgggtt cgggtggaag cgaccgttcg ggtagcggct gaaggaacga
     2221 tccttcgccc agaccggatc ttccttgctg tactcggcac cgaaggtgat cgaaccgcgc
     2281 tcaccggtct ggccgtagac gaagttgtag acctgcttct cgccgtcgcc ctggccgtac
     2341 tggccgccgt agacgctggc ttccaggccg tcgaagttct tgcgggtgat gatgttgatc
     2401 acgccggcga tggcgtcgga gccgtagatc gccgaggcgc cgtcggtcag cacttcaatg
     2461 cgctcgacca ccgaggtcgg gatggcagcc aggtcggtgt agccgccggt gctgacgccc
     2521 atgcgcttgc cgtccagcag caccagggtg cgctccgggc ccaggccgcg caggtcgacg
     2581 tactggccgc ccacttcttc gcccgaggtc agggcgtcgg cacggctgat ggccggcgaa
     2641 ccggtcgccg acaggttctg cacgatatcg ccgacgctgg tgaagccctg cttctcgatg
     2701 tcggcgcgct gcagcgcgat cacgggctgc gcggtttcca tgctcgcctg gcggatgcgc
     2761 gagccggtga ccgaaatgcg gtccaggtcg gtcgtggcct tcgcttcctg ggcggaagca
     2821 aaggccggcg ccagcgccag cgcgatgccg gcgggcagca ggccgagccg cactgcggga
     2881 ttacaaacgt tcatctatct ctccaaggta cgtgttagca gcgtgttaaa acaccccagc
     2941 acgttacgat tgcgttgcga cgctgtattt gcgcgaccca accagagact ttgcagaatg
     3001 tggcggcaga accccgccgt tctcgcggaa gcgcgaagcg gattggccat agcgggcgcg
     3061 gaaggcgcgg gcgaagctgc agcagttgtc gaatccgctg gctgcggcaa cctcacccac
     3121 catcatgtcg gtgtcacgca gcagatcggc ggcccgttcc aggcgtaacc gtgccgaaag
     3181 cgactgagga ctctcttcgt agaggctctg gaaggtcttg gagagatacc agctggagaa
     3241 gttggtcagc tcggccaact caccgatccg caccacgcga tggctgttgc cctccaggta
     3301 cagccttgcg cgctgcatgc gcccgaacac ctggcgcttg cggctgcgcg agcgccccgg
     3361 gcagcgctgc acgttctcgg ccaggccccg ctgcaggctt gccagatgca gcagcagcgg
     3421 cctcagtgca tgggccggct ggccactggc cagcgcatcg cgccacagcc gcaggcccac
     3481 ccgggcgtcg ctgcggttca ggcggccacg accggcatac aggccacagt cggccatctc
     3541 ggtcagcacc cgcagcgctt cgatgttcag gttcaggccc acgcacaacc cgttgcggcc
     3601 cgcctgcacc agcggccggg actccttctc gaatgcgatc cactcgccct ggcgcagccg
     3661 gaagcgacct tccttggctt cgacccagga actgccacgc acctgcatcc acaccgtgaa
     3721 gctgcttccc gccgtctgca ggctgcccag ccgggcgacg cccaggcagg tcggcgtacc
     3781 ttcatcgagg gacttgtcga gagagacggt ttggccgcga tcggccagcg agagttgacg
     3841 catgggggca ccacggattt gcctagtaca ggcctccgtt ttgcccaatc aggcggcagc
     3901 gcgtcaggaa agtctgccga gatcgccacg aattcgcggc gagaacggca cgaaaaaatt
     3961 acgaagaaaa attcttcttg aaaatcaaaa gcctggagaa cgccggaaac aacgtcggcg
     4021 ccggcttagg cagctgcatg acgccgatgt cggcaccatc gctcacggcc agggccacgt
     4081 acagatcacg accatcggcg ctggcactga tcccgttgcc cgcgctgagc ctttgtgcat
     4141 ccaggcaacg ctccggggcc tcgacaccgg cctcgatgcg gaccagggtc gtgccacacc
     4201 gggtagaggt tcccaggtag ccgacagcgc cactgccggc gaccgtccag gtgcgatagc
     4261 gccagcggct cggccggtcc tcgctgatct ggcgcacgct ggccgacgac agcgccggat
     4321 cgaccgacca cagcccgcca gccgccagcc gcgtgaacag cacccgcccg ctgccacgat
     4381 cgaaacgggc ctgcgatacc ccctcgatgc tggccagccg gcgccagggc tgggtgctgc
     4441 gatcgaacag gctcaaccgg gtgcgctggt ccgcatcgcg ttcaaccacc agcagctggt
     4501 cctcggttgc accgtacagg gcctgcagcg gctgctccgc cggcaccggc agcgcctgca
     4561 ggcgctcatc gcgcggtgag atctcgtaga tcaccgtgcg cccgtgttca tctcgcccca
     4621 ccaccagcag gtggcggctg tcggcggccc agtccggcgc ctgccgcccc tctggccgca
     4681 ggccctcgat cggccgcaac gagtccggcc gctgcatgtc ggcccaccac agggcgaaac
     4741 tgcccgaacg atcagaggtg aagaccagct gccggccgtc aggcgccgcc atcggctggc
     4801 catcgcggcc actggaagcg aacaggcgct gcgcgctgcc gccatcggtc ggcaccttga
     4861 acacaccgaa ctgcgcacgc ctgtgaacga acgccagcac cccgccatgc cgcgacaccg
     4921 cgggccactg cgcatcgtcc aagccggcat cacgcagcgt gcggcgttca acgtcgaggt
     4981 agtacaggcg cacttcgctg tcgacacgcc gcccgaacac gatggtgcgg ccatcatcga
     5041 cccacgccca gccccgctgc tcggccgctt cattggtcag ctgctccggg acgccgccac
     5101 tggccggcat ccgccacagg tcgcccatct gcggattgcg cacgaacacc agccacttgc
     5161 cgtccggcga gtagcgcggc gcatagtcga agtcgtccgc atcaacgctg tagtccaggg
     5221 cattccactg accactggcc aggtccagca cccggatgcc gcgatgcgca taccgcccga
     5281 ccatgctgcc gaataccagc cctcggccgt cgggggtcca gtcgaaactg agcagttcgg
     5341 tgccgtcaca gcgtgtcgcc tggcgcagcg cgccgcccgt agcgctggca atcagcacct
     5401 ggcagccgcc ttcggcgctg aaccgtgcaa aggcgatctc gcggccatcc ggcgaccagc
     5461 tgggaaaacg atcgctggcg cccaccgggg gggccagcaa ctggcgcgcg ggcgcattgc
     5521 ccgaggtctg caccttgatc gctccgccgc ccttgccatc ctcgttggca ccttcgtagg
     5581 cgacctgcga accatcggga gagagtgttg gataggtctc aaaaccactg gtcgcggtaa
     5641 tcagccggta gggccgctgc gggctgccga tcacgcggac accgttctcg acagccgcat
     5701 ccaccggcga actcgccacc ggggcccggc gcagcagcag catcgtcagc acgatcaccg
     5761 ccgccagcat caacaggcct
//
LOCUS       DAOKIP010000233         5742 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.234,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000233 DAOKIP010000000
VERSION     DAOKIP010000233.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 5742)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5742)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5742
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.234"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(38..931)
                     /gene="ubiA"
                     /locus_tag="QEL58_003519"
     CDS             complement(38..931)
                     /gene="ubiA"
                     /locus_tag="QEL58_003519"
                     /EC_number="2.5.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006399917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxybenzoate octaprenyltransferase"
                     /protein_id="HDS1677951.1"
                     /translation="MADTPLTSPQSPATPRWRHYWSLMRADRPIGTLLLLWPTWWALW
                     LAAGGLPPLWTLFVFTAGVWLTRSAGCVINDYADRWLDPHVERTKARPLATGAISGRA
                     ALVLFAVLMLVAFGLVLTLNGLTIGLSFIGVFLAASYPYLKRYTHLPQVYLGMSFGWG
                     IPMAFAAVQGEVPMLGWLLYAGNILWSTAYDTWYAMVDREDDLKMGSHSTAILFGDLD
                     LVIQGVLYALFLATMALVGVRGGLGGYYLAGVAVATVLVVYEFWICRNRERGPCFKAF
                     LHNNWVGAALFAGIAVDLALR"
     gene            1082..1158
                     /locus_tag="QEL58_003520"
     tRNA            1082..1158
                     /locus_tag="QEL58_003520"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1116..1118,aa:Arg,seq:ccg)
     gene            1229..2356
                     /locus_tag="QEL58_003521"
     CDS             1229..2356
                     /locus_tag="QEL58_003521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012512382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HDS1677952.1"
                     /translation="MTPSDLLKLAAGAAILGLAALSTGVSFGRARHGSHLLTTFFACF
                     AAANLFGLVLLGGQAWLSADAVRWLRVIEVPLVFLLGPLLYRHARALLSPAPDHTSLL
                     PLAHLLPAMLAFVISLLNAAAPFEASPLGKVLFQLSFHGWLLQGTPYLLATLWLSLRT
                     PSAPRGTAIQRSGLRGLAIVMAGCWLASAMNRWPPDAAPLLASIGLSLLTTAGMYLLA
                     CQVVRQQLRARVVTSAPVLMDMPASTEDTPRARYERSGIDATQCAAIASALTALMQDE
                     RLHEAPGLDLQSLSQRSGWSSNQVSQALNQGLGQNFSEFVTGFRVAAARTCLSDPSDL
                     RSVLDIGLAAGFGSKSTFNSAFKRATGQTPSEYRRRRTTSD"
     gene            2439..4316
                     /locus_tag="QEL58_003522"
     CDS             2439..4316
                     /locus_tag="QEL58_003522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012512383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartyl protease family protein"
                     /protein_id="HDS1677953.1"
                     /translation="MRLRRMLCGLLWMLAVPLHAAAVDAADVLARARAASGGERWQAT
                     QHLQAEGEQSLGGLHGRWELNQDLRAGRYVEQAQLGDFIVAQGFDGQLSWRRDYGGEV
                     GLLDGTVPRRTARTQSWLTTRGYWSSAYPASRFAGPRGGIHNGQRYDVLSTTPEGADP
                     IELWFDTRSGLLGRVVIASARTPTATTLEDYRAVEGLMLPHRIITDTLDAQGRADPRL
                     RSDVRVQRYRVNSPMPDARYAPPAMAADSYIEDASGTTRVPFDLINNHVYIEAEVDGQ
                     PARFLVDTGAINLLTPTAAKRLGLTTAGRLSVHGAGDNASDLGLAQARHLRIGGAHLA
                     NPVFHIIDLGQQINSMGVPHDGFIGYETFLRFVTTFDYGARVLSFTRPGHYQPPANAV
                     MLPFEQDDRAPVLNGELDGIPLRLWLDTGSRNSLSLSSPFVRTHGLLEKYHASEEAVL
                     GWGLGGPGRARPARLGVLRMGSVEVNGLVGDLSSTDKGALALADYGAILGGGVLRRFS
                     MRIDYDAKRLYLVPNAESTQPDAFDRSGLWLQAEDAALRVADVAPTSAGARAGLRRDD
                     RIVMIDGEPVATRKLGDWRAQLRERPMGTGLGVRYLRDGRQMDTRLVLADRVAERWPA
                     Q"
     gene            complement(4382..5737)
                     /locus_tag="QEL58_003523"
     CDS             complement(4382..5737)
                     /locus_tag="QEL58_003523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006399920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HDS1677954.1"
                     /translation="MKRREFIAASAAVAASSLLPQTPAWARGRKVRLAMIGTGMRGLV
                     LLKELVRRDDVEVVALCDIEPIMLGRAVDTVSKAGKPAPKTYGQDRDTNAWKRLLEQK
                     GIDGVIIATPWEYHAPMAIAAMQAGVAVGCEVVAGITLQDHWDVLKTQLSTGTPYMLL
                     ENVCYRRDVMAALQMVRQGLFGELVHLQAGYQHDLRGVKFNSGDPNQPYDSGVEFGPK
                     GWSEARWRTEHSVERNGELYPSHGIGPCAMYTGINRGNRFTHINAFATKARGLHEYTV
                     AKSGGTTHPSTRVKFKLGDIVTTTLACENGETILLQHDTSLPRPYSMGFRVQGTKGLW
                     MDVNHSIHIEGRSPPHQWEEFKKYQDEYEHPLWKQNADTAASAGHGGMDWFVIHAFVE
                     ALKAKAPMPIDIYDAVTWSAITPLSEQSIANSFQTLEFPDFTAGAWKQRKPIFAFDGR
                     Y"
BASE COUNT          912 a         1950 c         1900 g          980 t
ORIGIN      
        1 acagccggac agcggccggc tctacctcac cctggcgtca gcgcagcgcc aggtccacgg
       61 cgatgccggc aaacagcgcg gcaccgaccc agttgttgtg caggaacgcc ttgaagcacg
      121 ggccgcgttc gcggttgcgg cagatccaga actcgtacac caccagcacg gtggccacgg
      181 ccacgccggc caggtagtac ccgcccagcc cgccgcgcac gccgaccagc gccatcgtgg
      241 ccaggaacag cgcatacagc acgccctgga tgaccaggtc gagatcaccg aacaggatcg
      301 cggtggagtg cgagcccatc ttcaggtcat cctcgcggtc gaccatggcg taccaggtgt
      361 cgtaggcggt ggaccacagg atgttgccgg cgtacagcag ccagcccagc atcggcacct
      421 cgccctgtac ggcggcgaat gccatcggga tgccccagcc gaacgacatg cccaggtaga
      481 cctgcggcag atgggtatag cgcttcaggt aggggtagct ggcggccagg aacacgccga
      541 tgaagctgag gccaatggtc aggccgttca gggtcagcac caggccgaac gccaccagca
      601 tcagcaccgc gaacaacacc agcgcagcgc ggccactgat cgcgccggtg gccagcggac
      661 gcgccttggt gcgttccaca tgcgggtcga gccagcggtc ggcgtagtcg ttgatgacgc
      721 aaccggccga gcgggtcagc cacacgccgg cggtgaacac gaacagcgtc cacaacggcg
      781 gcaggccgcc ggcggccagc cacagcgccc accaggtggg ccacagcagc agcagcgtgc
      841 cgatcgggcg atcagcgcgc atcagactcc agtaatgccg ccaacgcggc gtcgccggcg
      901 actgcggcga agtgaggggg gtatcagcca tgccgatagg atactcctgc ccctccgaca
      961 gggctttgcc tggcgggggg agatttgttc ggcgaaactg gatagaatgc cggtcccgca
     1021 ccgcttcatg gcgctgcgat gcccgccccg gcactggccg acggcgcggc ggttctacaa
     1081 cgcgcccgta gctcagccgg atagagtagt ggcttccgaa gccattggtc gggggttcga
     1141 atccctccgg gcgcgccatc ttccccttgt tgcctgtaca ccgctcccgg tgctggacgt
     1201 tgctgcgtgc ttcatcaaca ctgcaggcat gacgccatcg gatctgctga aactggcggc
     1261 aggcgccgcg attctcggcc tggccgcctt gtccaccgga gtgagcttcg gccgcgcccg
     1321 gcatggcagc cacctgctca ccaccttctt cgcctgtttc gccgccgcca acctgttcgg
     1381 actggtgctg ctgggtggcc aggcctggct gtcggccgac gccgtgcgct ggctgcgggt
     1441 catcgaggtg ccactggtct ttctgctggg tccgctgctg taccgccatg cacgtgcgct
     1501 gctgtcccct gcgccggacc acacttcgtt gctgccgctc gcgcatctgc tgccggccat
     1561 gctcgcgttc gtcatttccc tgttgaatgc tgctgcgcct ttcgaagcct cgccgctggg
     1621 caaggtgctg ttccagctca gcttccatgg ctggctgctg cagggcacgc cctacctgct
     1681 ggccacgctg tggctgtcac tgcgcacgcc ttcggctccg cgcggaactg ccatccaacg
     1741 cagcggacta cgcgggctgg cgatcgtgat ggcgggctgc tggctggcca gcgcgatgaa
     1801 ccggtggccg ccggacgccg ctccgcttct ggccagtatc gggctcagcc tgttaaccac
     1861 ggcaggtatg tacctgctgg cgtgccaggt cgtacgccag cagctgcgtg cacgtgtggt
     1921 cacttcggca cccgtcctga tggacatgcc cgcatccacc gaggacacgc cccgcgcacg
     1981 ctacgaacgc tcgggcatcg atgcaacgca gtgcgcggcc attgccagcg cgctgaccgc
     2041 attgatgcag gacgaacgcc tgcatgaagc gcccggactg gatctccagt ccctcagcca
     2101 gcgcagcggc tggtcatcca accaggtctc gcaggccctc aaccagggcc tgggccagaa
     2161 tttttccgag ttcgtgaccg gcttccgtgt ggctgcagcg agaacgtgcc tgtccgatcc
     2221 gtccgacctc cgcagcgtgc tggacatcgg ccttgccgcc ggcttcggca gcaagtccac
     2281 cttcaacagc gcgttcaagc gcgccaccgg gcagacgccc agcgagtacc ggcgccgtcg
     2341 caccacgtcc gactgaacgt ccaatccttc acgcccggtc gaatatctcc cgtccctgcg
     2401 ctgccatcac cttctgaccc aatgaaggag gtgaagcgat gcgtttgcga cggatgctgt
     2461 gtggcctgct gtggatgctg gcggttcctt tacacgccgc agcggtggat gctgccgatg
     2521 tgctggccag ggcccgcgca gccagtggcg gcgagcgctg gcaggctaca cagcacctgc
     2581 aggctgaggg cgagcagtcg ctgggtggtc tgcatgggcg gtgggagctc aaccaggatc
     2641 tgcgcgccgg gcgctatgtc gaacaggcgc agctggggga cttcatcgtc gcgcaggggt
     2701 ttgatgggca actgtcctgg cggcgcgact acggcggcga agtcggcctg ctggatggca
     2761 ccgtgccacg ccgcaccgcg cgcacgcagt cctggctgac cacccgcggc tactggtcca
     2821 gcgcctaccc ggcctcacgc tttgcaggcc cgcgtggcgg gattcacaac ggacagcgct
     2881 atgacgtgct gtcaaccacg ccggagggag cggacccgat cgagctctgg ttcgacaccc
     2941 gcagcggcct gctcggccgg gtggtcattg cctccgcgcg cacacccacc gccaccacgc
     3001 tggaagacta ccgggccgtg gaaggtctga tgctgcccca ccgcatcatc accgacaccc
     3061 tcgatgccca gggccgtgcc gatccacgat tgcgcagcga cgtgcgggtg cagcgctatc
     3121 gggtgaacag cccgatgccg gacgcccggt atgcgccacc ggcgatggcc gccgacagct
     3181 acatcgagga tgccagcggc accacccgcg ttccgttcga cctgatcaac aaccatgtct
     3241 atatcgaggc cgaggtggat ggccagccgg cgcgcttcct ggtcgacacc ggcgccatca
     3301 acctgctgac ccctacggcg gccaagcgcc tgggcctgac cacagcgggc cgcctgagcg
     3361 tgcatggtgc cggcgacaac gccagcgacc tgggcctggc acaggcccgc cacctgcgca
     3421 tcggtggcgc gcaccttgca aacccggtgt tccacatcat cgacctgggc cagcagatca
     3481 actcgatggg cgtgccacac gatggcttca tcggctatga gaccttcctg cgctttgtca
     3541 ccaccttcga ctatggcgcg cgcgtgctca gcttcacccg gccgggccac taccagccgc
     3601 ccgccaacgc cgtgatgctg ccgttcgaac aggacgatcg cgcaccggta ctgaatggcg
     3661 agctggacgg tatcccgctg cgtctgtggc tggacaccgg gtcacgcaat tcgctgagcc
     3721 tgagcagccc gttcgtgcgc acgcatgggc tgctggagaa gtaccacgcc agcgaggaag
     3781 cagtgcttgg ctggggcctc ggtggcccgg ggcgcgcgcg accagcacgg ctgggtgtgc
     3841 tgcgcatggg cagtgtcgag gtcaatggcc tggtcggcga tctgtccagc acggacaagg
     3901 gtgcgctcgc cctggccgac tatggcgcga ttctcggtgg cggcgtgctg cggcgcttct
     3961 ccatgcgcat cgactacgat gccaagcgcc tgtacctggt gcccaacgct gaaagcacgc
     4021 agcccgatgc cttcgatcgc agtgggttgt ggcttcaggc cgaggacgct gcactgcgtg
     4081 tggccgatgt ggcgccaacc agtgccgggg cacgcgccgg gctgcgaagg gatgaccgca
     4141 ttgtcatgat cgatggcgag ccggtggcca cgcggaagct gggcgactgg cgcgcgcagc
     4201 tgcgcgagcg cccaatggga accggcctgg gcgtccgtta tctgcgcgat ggccggcaga
     4261 tggatacccg gctggtgctg gccgatcggg tagcagagcg ctggcctgcg cagtgaggca
     4321 ggaaaaacag caacgccggg caatgcccgg cgttgctgtc accgcatgga aggggcagaa
     4381 ctcagtacct gccgtcaaac gcgaagatcg gcttgcgctg cttccacgcg ccagcggtga
     4441 agtccgggaa ctccagcgtc tggaagctgt tggcgatcga ctgctcgctc aacggcgtga
     4501 tcgcactcca ggtcaccgcg tcgtagatgt cgatcggcat cggcgccttg gccttcagcg
     4561 cttccacgaa ggcatggatg acgaaccagt ccatgccacc gtggccggcg ctggcggcgg
     4621 tgtccgcgtt ctgcttccac agcggatgct cgtactcgtc ctggtacttc ttgaactctt
     4681 cccactggtg cggcgggctg cggccttcga tgtggatcga atggttgaca tccatccaca
     4741 ggcccttggt gccctgcacg cggaagccca tcgagtacgg gcgcggcagc gaggtgtcgt
     4801 gctgcagcag gatggtttcg ccgttctcgc aggccagcgt ggtggtcacg atgtcgccca
     4861 gcttgaactt gaccctggtg ctggggtggg tggtgccgcc gctcttggcc acggtgtatt
     4921 cgtgcaggcc gcgcgccttg gtcgcgaacg cattgatgtg ggtgaagcgg ttgccgcggt
     4981 tgatgccggt gtacatcgcg cacgggccga tgccgtggct ggggtacagc tcaccgttgc
     5041 gctcgaccga atgctcggtg cgccagcgcg cttcgctcca gcccttgggg ccgaattcca
     5101 cgccgctgtc gtacggctgg ttcggatcgc cggagttgaa cttcacgccg cgcaggtcgt
     5161 gctggtagcc ggcctgcaga tgcaccagtt cgccgaacag gccctggcgc accatctgca
     5221 gtgcggccat cacgtcgcgg cggtagcaga cgttctcaag cagcatgtac ggggtgccgg
     5281 tgctcagctg ggtcttcagt acgtcccagt ggtcctgcag ggtgatgccg gccaccactt
     5341 cgcagcccac ggccacgccg gcctgcatcg cggcaatcgc catcggtgcg tggtattccc
     5401 acggcgtggc gatgatcacg ccatcgatgc ccttctgttc cagcaggcgc ttccaggcgt
     5461 tggtgtcacg gtcctggcca taggtcttgg gcgccggctt gccggccttg ctgaccgtgt
     5521 ccacggcgcg gccgagcatg atcggctcga tgtcgcacag cgcgaccact tcgacatcgt
     5581 cgcggcgcac cagttccttc agcagcacca ggccacgcat gccggtaccg atcatggcca
     5641 ggcgcacctt gcgcccgcgt gcccatgccg gggtctgcgg cagcaggctg ctggcggcga
     5701 cagcggcgct ggccgcgatg aattccctac gcttcatggc aa
//
LOCUS       DAOKIP010000234         5617 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.235,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000234 DAOKIP010000000
VERSION     DAOKIP010000234.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 5617)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5617)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5617
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.235"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(48..1100)
                     /gene="obgE"
                     /locus_tag="QEL58_003524"
     CDS             complement(48..1100)
                     /gene="obgE"
                     /locus_tag="QEL58_003524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005408559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase ObgE"
                     /protein_id="HDS1677955.1"
                     /translation="MKLVDEAEIEVFAGNGGNGCIGFRREKFIPLGGPDGGDGGAGGS
                     VYIRADENLNTLVDFRHDRIFKAQRGENGMGRQAYGKGGEDLTITVPVGTVVINVATD
                     EVIGDLTQHNDRLLVAKGGRGGLGNMHFKSSTNRSPRQALPGEPGEERTLKLELKLLA
                     DVGLLGFPNAGKSTLIRAVSAATPKVADYPFTTLYPNLGVVKVENYRSFVIADIPGLI
                     EGAADGAGLGAQFLRHLQRTRLLLHLVDISPMEGGVEGISPVEQVRAIERELEKHDPE
                     LLNKPRWLVLNKADLMFEDEAKAAAEQIVAELGWKEPWFLVSALGREGTFPIMSRIMA
                     FFDRQKEDELEARNAQ"
     gene            complement(1304..1567)
                     /gene="rpmA"
                     /locus_tag="QEL58_003525"
     CDS             complement(1304..1567)
                     /gene="rpmA"
                     /locus_tag="QEL58_003525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013534652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L27"
                     /protein_id="HDS1677956.1"
                     /translation="MAHKKGVGSSRNGRDSNPKYLGVKIFGGQAIEAGNIIVRQRGTQ
                     FHPGSGVGLGRDHTLFALVDGKVEFSVKGAKKRRTVSIVSADA"
     gene            complement(1586..1894)
                     /gene="rplU"
                     /locus_tag="QEL58_003526"
     CDS             complement(1586..1894)
                     /gene="rplU"
                     /locus_tag="QEL58_003526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003484328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L21"
                     /protein_id="HDS1677957.1"
                     /translation="MYAVLVTGGKQYRVAQGEKLRVEKLEVEVGSEIKFDNILMLGDS
                     DGVKLGDALKGAAVTAKVLSQGRADKVRIIKFRRRKHHMKRQGHRQYYTEIEITGIAG
                     "
     gene            2213..5215
                     /gene="uvrA"
                     /locus_tag="QEL58_003527"
     CDS             2213..5215
                     /gene="uvrA"
                     /locus_tag="QEL58_003527"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014646372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HDS1677958.1"
                     /translation="MAMDFIRIRGARTHNLKNLDLDLPRDKLIVITGLSGSGKSSLAF
                     DTIYAEGQRRYVESLSAYARQFLSVMEKPDLDHIEGLSPAISIEQKSTSHNPRSTVGT
                     ITEIYDYLRLLYARVGTPRCPDHGYPLEAQTVSQMVDQVLTLDPEQRYMLLAPVIRDR
                     KGEHAQVFDQLRAQGFVRVRVDGELHEIDAVPPLALRQKHTIEAVIDRFRPREDIKQR
                     LAESFETALKLGDGMASVQSLDNTETAPTLFSSKYSCPVCDYSLPELEPRLFSFNAPM
                     GACPGCDGLGIAEFFDPSRVVVHPELSLAAGAVRGWDRRNAYYFQLIASLAKHYKFDV
                     DAAWNSLPENVQQAVLYGSGDEAITFTYFTEAGGRTQRKHRFEGIIPNLERRYKETES
                     PAVREELSKYISEQPCPECHGARLNKAARNVFVADRPLPDLVVLPIDEALKFFSELSL
                     PGWRGEIASKIVKEIGERLGFLVDVGLDYLTLERKADTLSGGEAQRIRLASQIGAGLV
                     GVMYVLDEPSIGLHQRDNERLLGTLTRLRDLGNTVIVVEHDEDAIRLADYVLDIGPGA
                     GVHGGEIVGQGTLQDILEAPRSLTGQYLSGKRAIEIPARRHKPNPKMTLHLRGASGNN
                     LKGVDLAIPSGLLTCVTGVSGSGKSTLINDTLFSLAANEINGSSHPIAPYKEIDGLDL
                     FDKVVDIDQSPIGRTPRSNPATYTGLFTPLRELFAQVPEARARGYSPGRFSFNVRGGR
                     CEACQGDGLIKVEMHFLPDVYVPCDVCHGKRYNRETLEILYKGFNINDVLEMTVEDAL
                     KLFEPVPSIARKLETLVDVGLSYIKLGQSATTLSGGEAQRVKLSKELSRRDTGRTLYI
                     LDEPTTGLHFHDIEALLGVLHKLRDEGNTVVVIEHNLDVIKTADWIVDLGPEGGHRGG
                     TILVTGTPEDVAACPQSYTGQFLARMLPSTSARPERPAAVANKPDARPPRKVKPEKPA
                     KVAKKAVAATSTGKASKTAAASKKKKDA"
     gene            5215..>5617
                     /locus_tag="QEL58_003528"
     CDS             5215..>5617
                     /locus_tag="QEL58_003528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HDS1677959.1"
                     /translation="MSSEHKILARIPISVRWRDMDSMGHVNNAKYISYLEEARVRWML
                     GVDGVSMTDRIAPVVAATNVNYRLPIVWPNDILVELFVERLGNSSVTIGHRIVDQQDE
                     SKLYSDGNVVVVWMDTQTGKSAPLPEAIRNAS"
BASE COUNT         1004 a         1896 c         1773 g          944 t
ORIGIN      
        1 gaaaaacccg gccaaagccg ggtttttcgc atggaaccac aacagcatta ctgcgcgttg
       61 cgggcttcca gctcgtcttc cttctggcga tcgaagaacg ccatgatccg gctcatgatc
      121 gggaaggtac cttcgcgacc cagcgccgac accaggaacc acggctcctt ccagcccagc
      181 tcggcgacga tctgctcggc cgcggccttg gcctcgtcct cgaacatcag gtcggccttg
      241 ttcagcacca gccagcgcgg cttgttcagc agctccggat cgtgcttttc cagctcgcgc
      301 tcgatcgcac gcacctgctc caccggagaa ataccctcca cgccaccttc catcggcgag
      361 atgtccacca ggtgcagcag caggcgggtg cgctgcaggt ggcgcaggaa ctgcgcacca
      421 aggccggcgc catccgccgc gccttcgatc aggcccggaa tgtcggcgat cacgaagctg
      481 cggtagttct ccaccttcac cacacccagg ttcgggtaca gcgtggtgaa cgggtaatcg
      541 gccaccttcg gcgttgccgc cgagacggcg cggatcaggg tgctcttgcc ggcgttgggg
      601 aagcccagca ggccaacgtc ggccagcagc ttcagctcca gcttcagcgt gcgctcttcg
      661 cccggctcgc ccggcagcgc ctggcgcggc gaacggttgg tcgagctctt gaaatgcatg
      721 ttgcccaggc cgccgcggcc gcccttggcc accagcaggc ggtcgttgtg ctgggtcagg
      781 tcgccgatga cttcatcggt ggcaacgttg atgaccacgg tgccgaccgg cacggtgatg
      841 gtcaggtctt cgccaccctt gccataggcc tggcggccca tgccgttctc gccgcgctgc
      901 gccttgaaga tgcggtcatg gcggaagtcg accagggtgt tcaggttttc gtcggcgcgg
      961 atgtacacgc tgccgcccgc accgccgtcg ccgccgtccg ggccgccgag cggaatgaac
     1021 ttctcgcgac ggaagccaat gcagccgttg ccgccgttgc cggcgaacac ttcgatttct
     1081 gcttcgtcta ccagtttcat tgtttcgatg cctgcgatgg gcgcggcatc tgcgccgtcg
     1141 ccttgaatgt aatgcgggcg cgcgtggccc gcagcccggc gcggccggtc ttccttttac
     1201 ccggtaactc taacgaaaag ccccgccgaa gcggggctct ccatgcagcg tgctcttcat
     1261 ccagcacagc catgccgagg cacgggtgcc ggcgatgcct ggatcaggcg tcggccgaga
     1321 cgatgctgac agtgcgacgc ttcttggcgc ccttgaccga gaactccacc ttgccgtcca
     1381 cgagggcgaa cagggtgtgg tcacggccca ggcccacgcc ggaacccggg tggaactggg
     1441 tgccgcgctg acgcacgatg atgttgccgg cttcgatggc ctggccgccg aagatcttga
     1501 cgcccaggta cttcgggttg gagtcgcgac cgttgcgcga ggagcctacg ccctttttat
     1561 gtgccatgac tgcttctcct gatgcttagc cggcgatgcc ggtgatctcg atttcggtgt
     1621 agtactgacg gtgaccctga cgcttcatgt ggtgcttgcg gcgacggaac ttgatgatcc
     1681 ggaccttgtc agcacgaccc tgggacagga ccttggcggt gacggcagcg cccttcagcg
     1741 catcgcccag cttcacgccg tcgctgtcgc ccagcatcag gatgttgtca aacttgatct
     1801 cgctgccgac ttcgacttcg agcttttcga cgcggagctt ttcgccctgc gccacgcggt
     1861 attgcttacc gccggtgacc agtactgcgt acatgaccag acttcctctg tagttattgt
     1921 ggtctatgga ctgccgccgt cgagggcgga caggagcggg attgtacgca gatcaatgcg
     1981 acagggtcaa gtcaacccct gaacggcccg ggagacccgg tcggaacggg gtcagatccc
     2041 ttttcacagc gtgaaaaggg atctgacccc ttcataaagc cttgtctcac aaggtgagac
     2101 accgggctgg cattgtcgcc cattgccccc atctggtcac ctcggtaggc tgaccgattg
     2161 ccgttccctg ctggcccggc acccagccaa cgcccccaca accggatccc ccatggcgat
     2221 ggatttcatc cgcatccgcg gcgcgcggac gcacaacctg aagaacctcg acctcgacct
     2281 gccccgcgac aagctgatcg tgatcaccgg cctgtccggc tcgggcaagt cctcgctggc
     2341 gttcgacacc atctacgcag aaggccagcg ccgctacgtc gagtcgctgt cggcctatgc
     2401 gcgccagttc ctgagcgtga tggaaaagcc ggacctggac cacatcgaag gcctgtcccc
     2461 ggccatctcg atcgagcaga agtcgacctc gcacaacccg cgttcgaccg tcggcacgat
     2521 caccgagatc tacgactacc tgcgcctgct gtacgcccgc gttggcaccc cgcgctgccc
     2581 ggaccacggc tacccgctgg aagcacagac ggtcagccag atggtcgacc aggtgctgac
     2641 cctggacccg gaacagcgct acatgctgct ggcgccggtc atccgcgacc gcaagggcga
     2701 gcacgcgcag gtgttcgacc agctgcgcgc gcagggcttc gtgcgcgtac gcgtggacgg
     2761 cgagctgcat gaaatcgacg cggtgccgcc gctggcactg cgccagaagc acaccatcga
     2821 ggcggtgatc gaccgcttcc gcccgcgcga ggacatcaag cagcgcctgg ccgagagctt
     2881 cgagaccgcg ctgaagctgg gcgacggcat ggcctcggtg cagagcctgg acaacaccga
     2941 aaccgcgccg acgctgttct cctccaagta ctcctgcccg gtgtgcgatt actcgctgcc
     3001 ggagctggag ccgcgcctgt tctcgttcaa cgcaccgatg ggcgcctgcc ccggctgcga
     3061 tggcctgggc atcgccgaat tcttcgatcc gtcgcgcgtg gtggtgcatc cggagctgtc
     3121 gctggccgcc ggtgcggtgc gcggctggga tcgccgcaat gcctattatt tccagctgat
     3181 cgcctcgctg gccaagcact acaagttcga cgtcgatgcg gcgtggaact cgctgccgga
     3241 aaacgtgcag caggccgtgc tgtacggcag cggcgatgaa gcgatcacct tcacctactt
     3301 caccgaagcc ggtggccgca cccagcgcaa gcaccgcttc gagggcatca ttcccaacct
     3361 cgagcgccgc tacaaggaaa ccgaatcgcc ggcggtgcgc gaagagctgt ccaagtacat
     3421 cagcgaacag ccgtgcccgg aatgccatgg cgcgcgcttg aacaaggccg cgcgcaacgt
     3481 gttcgtggcc gaccgcccgc tgccggacct ggtggtgctg ccgatcgacg aagcactgaa
     3541 gttcttcagc gaactgagcc tgccgggctg gcgcggcgag atcgcctcga agatcgtcaa
     3601 ggaaatcggt gagcgcctcg gcttcctggt cgatgtcggc ctggattacc tgaccctgga
     3661 acgcaaggcc gacaccctgt ccggtggcga agcgcagcgc atccgcctgg ccagccagat
     3721 cggcgccggc ctggtcggcg tgatgtacgt gctcgacgag ccgtcgatcg gcctgcacca
     3781 gcgtgacaac gagcgcctgc tcggcaccct cacccgcctg cgcgacctgg gcaacacggt
     3841 gatcgtggtc gagcatgacg aagacgcgat ccgcctggcc gactacgtgc tggacatcgg
     3901 cccgggcgcg ggcgtacacg gcggcgagat cgtcggccag ggcaccctgc aggacatcct
     3961 ggaggcaccg cgctcgctga ccggccagta cctgtcgggc aagcgtgcga tcgagattcc
     4021 ggcgcgccgg cacaagccga acccgaagat gaccctgcac ctgcgcgggg ccagcggcaa
     4081 caatctgaag ggcgtggacc tggcgattcc gtcgggcctg ctgacctgcg tgaccggtgt
     4141 gtccggctcg ggcaagtcga ccctgatcaa cgacaccctg ttctcgctgg ccgccaacga
     4201 gatcaacggt tcctcgcacc cgatcgcccc gtacaaggag atcgatggcc tggacctgtt
     4261 cgacaaggtg gtggacatcg accagtcacc gatcggccgc accccgcgtt cgaacccggc
     4321 cacctatacc ggcctgttca ccccgctgcg cgagctgttc gcgcaggtgc ccgaagcgcg
     4381 tgcgcgcggc tactcgccgg gccgtttcag cttcaacgtg cgcggtggcc gctgcgaagc
     4441 gtgccagggc gatggcctga tcaaggtcga gatgcacttc ctgccggacg tgtacgtgcc
     4501 ctgcgacgtc tgccacggca agcgctacaa ccgcgagacg ctggagatcc tgtacaaggg
     4561 cttcaacatc aacgacgtgc tggaaatgac cgtcgaggat gcgctgaagc tgttcgaacc
     4621 ggtgccgtcg atcgcccgca agctggaaac actggtcgac gtcggcctga gctacatcaa
     4681 gctgggccag agcgcgacca cgctgtccgg tggtgaagcg cagcgcgtga agctgtccaa
     4741 ggaactgtcg cgccgcgata ccgggcgcac cctgtacatc ctggacgagc cgaccaccgg
     4801 cctgcacttc cacgacatcg aagcgctgct gggcgtgctg cacaagctgc gcgacgaagg
     4861 caacacggtg gtggtgatcg aacacaacct ggacgtgatc aagaccgccg actggatcgt
     4921 cgacctgggt ccggaaggtg gccatcgcgg tggcaccatc ctggtcaccg gcacgccgga
     4981 agacgtggcg gcctgcccgc agtcgtacac cggccagttc ctggcgcgca tgctgccctc
     5041 caccagcgcg cgaccggaac gcccggccgc cgtggccaac aagcccgacg cccgcccgcc
     5101 acgcaaggtg aagcctgaaa agcccgccaa ggtggcgaag aaggcggtgg cggcaacaag
     5161 caccggcaag gccagcaaga ctgctgccgc cagcaagaag aagaaggacg cctgatgagc
     5221 agcgaacaca agatcctggc ccgcatcccg atcagcgtgc gctggcgtga catggacagc
     5281 atgggccacg tcaacaacgc caagtacatc tcctacctgg aagaagcgcg cgtgcgctgg
     5341 atgctgggcg tggacggcgt gtcgatgacc gaccgcatcg caccggtggt ggccgcgacc
     5401 aacgtcaact accggctgcc gatcgtgtgg cccaacgaca tcctggtcga actgttcgtc
     5461 gagcgcctgg gcaacagcag cgtgaccatc ggccaccgca tcgtcgacca gcaggatgag
     5521 tcgaagctgt attcggacgg caacgtggtg gtggtgtgga tggataccca gaccggcaag
     5581 agcgccccgt tgccggaggc gatccgcaac gcgtcta
//
LOCUS       DAOKIP010000235         5530 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.236,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000235 DAOKIP010000000
VERSION     DAOKIP010000235.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 5530)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5530)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5530
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.236"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..709)
                     /locus_tag="QEL58_003529"
     CDS             complement(<1..709)
                     /locus_tag="QEL58_003529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019300464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HDS1677960.1"
                     /translation="MTTNNGFDSLHSHAQRLKGASIPGLLAAEPGRVQDLALRVGPLY
                     VNFARQKYDAAALQALLALAAGRDVGGAINRLFRGEQVNLTEGRAALHTALRGDVVDA
                     PVAAEAYATARGIRQRMGVLVRALEDSGVTDVVSVGIGGSDLGPRLVADALRPVSGAR
                     LRVHFVSNVDGAAMQRTLATLDPAKTAGILISKTFGTQETLLNGQILHDWLGGSERLY
                     AVSANPERAAKAFAIAAD"
     gene            complement(706..1086)
                     /locus_tag="QEL58_003530"
     CDS             complement(706..1086)
                     /locus_tag="QEL58_003530"
                     /EC_number="4.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011036943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate 1-decarboxylase"
                     /protein_id="HDS1677961.1"
                     /translation="MHLSLLKTKIHRATVTHSELNYEGSIAIDDNLLAATGIREFEQV
                     HIWDVTNGARFSTYAIRAEAGSGVVSLNGGAARHVQVGDIIIIAAFASMTEQEADSFK
                     PKLVYVDGSNQITHTNDTIPTQAA"
     gene            complement(1174..1671)
                     /locus_tag="QEL58_003531"
     CDS             complement(1174..1671)
                     /locus_tag="QEL58_003531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005412963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677962.1"
                     /translation="MKIPATDTGRLAQASILAVLAAGMLPAQLVGGLLFALEFRRTPL
                     PALNGGGLMFVLAACGAIAVLLPMALFQQSQCRLRRGRFVWVGFGLAALVMAICTWPG
                     EDSGPLLQRLRYVDTFDVVGYGLLVLAAGGFGGVAGLAFHTVFRLSMGGTASAIPAAP
                     PGEDA"
     gene            complement(1738..2577)
                     /locus_tag="QEL58_003532"
     CDS             complement(1738..2577)
                     /locus_tag="QEL58_003532"
                     /EC_number="6.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011259031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pantoate--beta-alanine ligase"
                     /protein_id="HDS1677963.1"
                     /translation="MIQTFNELGALREQIGQWKREGLRVALVPTMGNLHGGHHSLVTL
                     ARQYADKVVASIFVNPTQFGPNEDFSRYPRTPEADVVGLEQVGCDAVWLPSVEAMYPL
                     GVDKTTQMHAPGVSEVLEGASRPGHFDGVCTVVARLFLQVQPDVAVFGRKDYQQLAVI
                     RQMVAELSFPIQIVGAEIVRDEDGLAKSSRNQYLSAEQRPVATALHRTLLGMREGYVA
                     GQSRAQIEADATAALQAAGFQVDYAVLRTPELAEPTFDGGGRVALIAARLGSTRLIDN
                     LEF"
     gene            complement(2574..3389)
                     /gene="panB"
                     /locus_tag="QEL58_003533"
     CDS             complement(2574..3389)
                     /gene="panB"
                     /locus_tag="QEL58_003533"
                     /EC_number="2.1.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005416119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-methyl-2-oxobutanoate
                     hydroxymethyltransferase"
                     /protein_id="HDS1677964.1"
                     /translation="MSTHADSKPWTVPALAEAKRNGQKLVMLTAYDAGFARTFDANGV
                     DLILIGDSLGMVVQGHDSTLPVTVADMVYHTRAVARVLQRALLVADLPFGADATPERA
                     LDASLQLLQAGAEMVKIEGAGFKVDIIRYLVEREIPVCAHLGLTPQSVLRLGGFKIQG
                     RGDAARQLVEDARAVAAAGASIMVLECVPTPVAAEVTAAVDVPTIGIGAGPQCDGQVL
                     VLHDFLGLDSGHRRPKFVKDFLAEGGSVAGATRAYADAVRDGSFPDEQHAYAQ"
     gene            complement(3424..3909)
                     /gene="folK"
                     /locus_tag="QEL58_003534"
     CDS             complement(3424..3909)
                     /gene="folK"
                     /locus_tag="QEL58_003534"
                     /EC_number="2.7.6.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008267911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-amino-4-hydroxy-6-
                     hydroxymethyldihydropteridine diphosphokinase"
                     /protein_id="HDS1677965.1"
                     /translation="MTLAWIGLGANLGDAAETGGAAIAALDGLPGTRLQQASRLYATP
                     AWGNQDQPPFVNAVAAVDTALPADELLQAMLALEQRFGRVRDPAVHWGPRALDLDLLL
                     YGAQELDQPGLQVPHPYLHERAFVLVPLAEIAPDLAIPGHGRVRDAVMRVDACGIAPI
                     E"
     gene            complement(3913..5292)
                     /gene="pcnB"
                     /locus_tag="QEL58_003535"
     CDS             complement(3913..5292)
                     /gene="pcnB"
                     /locus_tag="QEL58_003535"
                     /EC_number="2.7.7.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005416117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polynucleotide adenylyltransferase PcnB"
                     /protein_id="HDS1677966.1"
                     /translation="MGNPETSTGSANIISSATSPFSLRVIPRDQHTISRKDISPNALR
                     VLYRLRDAGFGAYLVGGAVRDLLVNGQPKDFDVATDATPEQVKQLFRNCRLIGRRFRL
                     AHVVFGREIIEVATFRANSDDGSGDREMENGMLVRDNVYGSIEDDAVRRDFTCNALYY
                     AIEDFSVRDYTGGFEDVQARLMKLIGDPEQRYREDPVRMLRAVRLAAKLGFQIEEGTA
                     APIPHLAGLLNEAAPARLFEEVLKLFLSGHGVASFEGLERYGLLDVLFPESAKALKSN
                     RTGALRRMLVEGLANTDARVANDEPVSPAFLFALLLWPAYCRAQATLLKQGVAPEEAQ
                     RRAADRVTVQQLSTIALPRRFSLPMQEIWLLQSRFGSRQRKRVFRTLTHPRFRAAFDF
                     LSLRQVASAEHAADVEFWREAQAQSGRELESSLDAMHSEEGDDESGAPRKRRRRRRRP
                     GAPAGAAGE"
     gene            5345..5419
                     /locus_tag="QEL58_003536"
     tRNA            5345..5419
                     /locus_tag="QEL58_003536"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:5378..5380,aa:Glu,seq:ctc)
BASE COUNT          905 a         1856 c         1904 g          865 t
ORIGIN      
        1 gatcggcagc gatcgcgaac gccttggcgg cacgttccgg attggcgctg acggcataca
       61 ggcgctcgct gccaccgagc cagtcgtgca ggatctggcc gttgagcagg gtttcctggg
      121 taccgaaggt cttggagatg aggatgccgg cggtcttggc cggatccagc gtggccagcg
      181 tgcgctgcat cgcggcgccg tccacgttcg acacgaaatg cacgcgcagg cgcgcgccgc
      241 tgaccgggcg cagcgcatcg gccaccaggc gcgggccgag atcggaaccg ccgatgccga
      301 cgctgaccac gtcggtcacg ccgctgtctt ccagcgcgcg caccagcacg cccatgcgct
      361 ggcggattcc gcgcgcagtg gcataggcct cggccgccac cggcgcatcg accacatcgc
      421 cacgcagtgc ggtatgcagc gcagcgcggc cttcggtcag gttgacctgc tcgccgcgga
      481 acaggcgatt gatggcaccg ccgacatcac ggccggcggc cagtgccagc aacgcctgca
      541 gcgcggcggc atcgtatttc tgccgggcga agttgacgta caacggaccg acccgcagcg
      601 ccaggtcctg tacgcggccg ggttcggcgg cgagcaggcc gggaatgctt gcgcccttca
      661 ggcgctgggc gtgggaatgc agcgagtcga atccgttgtt cgttgtcatg cggcctgggt
      721 cgggatcgtg tcgttggtgt gggtgatctg gttgctgcca tcaacgtaca ccagcttcgg
      781 cttgaagctg tcagcttcct gctcggtcat gctggcgaac gcggcgatga tgatgatgtc
      841 accgacctgc acgtggcgcg cggcgccacc gttgagcgag acaacgccgc tgccggcttc
      901 ggcgcggatg gcataggtcg agaagcgcgc accgttggtc acgtcccaga tgtgcacctg
      961 ctcgaactcg cggatgccgg tggcagccag caggttgtcg tcgatggcga tcgagccttc
     1021 gtagttcagc tcggaatggg tgacggtggc gcggtggatc ttggtcttga gcagggacag
     1081 gtgcatgggg gcgctgcaac ggcaaaggaa agagcggatt ctagcacccg cttgggcgtc
     1141 gtcaggggcc tgcggcagga cgctgaaggc cgttcaggcg tcctcgcccg gcggggctgc
     1201 cgggatcgca ctggcggtgc cacccatgga caggcggaac acggtgtgga aggccagccc
     1261 ggcgaccccg ccgaagcccc ctgcagccag caccagcagg ccatagccaa ccacatcgaa
     1321 ggtgtcgacg taacgcaggc gctgcagcag cggaccgctg tcctcacccg gccaggtaca
     1381 gatggccatg accagcgccg ccagcccgaa gccgacccac acgaagcggc cccggcgcag
     1441 gcgacactga gactgctgga acagcgccat cggcaacagc acggcaatgg caccgcaggc
     1501 ggccagcacg aacatcagtc cgccgccgtt gagcgccggt agcggtgtgc gcctgaattc
     1561 gagtgcgaac aacagtccgc ccaccagctg ggccggcagc atgcccgcag ccagcaccgc
     1621 caggatcgag gcttgggcaa ggcggccggt atcagtggca ggaatcttca tgtgctgtct
     1681 cccgtccgtg ggaaggtggg aggcgcccgt tgcgggcgcc ccggagccgc atgcggctca
     1741 gaattccagg ttgtcgatca gccgggtact gcccaggcgc gcggcaatca gcgccacgcg
     1801 gccaccgccg tcgaaagtcg gctcggccag ctccggggtg cgcagcaccg cgtagtcgac
     1861 ctggaaaccg gccgcctgca gcgcggccgt cgcatcggcc tcgatctgcg cgcgcgactg
     1921 gccagccaca tagccttcgc gcatgcccag cagggtgcgg tgaagggcgg tcgcgaccgg
     1981 acgctgttcg gcgctcaggt actggttgcg cgaactcttg gccaggccat cctcgtcgcg
     2041 cacgatctcc gcaccgacga tctggatcgg gaacgacaac tcggccacca tctgcctgat
     2101 cacggccagc tgctggtagt ccttgcggcc gaacaccgcc acatccggct gcacctgcag
     2161 gaacaggcgc gccaccaccg tgcacacgcc gtcgaagtgg cccgggcggc tggcgccctc
     2221 cagcacttcg ctcacgcccg gggcgtgcat ctgcgtggtc ttgtccacgc ccagcgggta
     2281 catcgcctcc acgctgggca gccacacggc atcgcagccg acctgctcca gcccgaccac
     2341 atcggcctcg ggcgtgcgcg ggtagcgact gaagtcttca ttggggccga actgggtcgg
     2401 gttgacgaag atgctcgcca ccaccttgtc ggcgtactgg cgcgccaggg tcaccagcga
     2461 atgatggccg ccatgcaggt tgcccatggt cggcaccaat gccacgcgca ggccttcgcg
     2521 cttccactgg ccgatctgct cgcgcagtgc gccgagctcg ttgaaggtct ggatcattgg
     2581 gcgtaggcgt gctgttcgtc agggaagctg ccgtcgcgca cggcgtcggc ataggcgcgg
     2641 gtggcaccgg ccaccgaacc gccttcggca aggaaatcct tgacgaactt cgggcggcga
     2701 tgaccgctgt ccaggccgag gaaatcatgc agcaccagca cctggccatc gcactgcggg
     2761 ccggcgccga tgccgatggt cggcacgtcc accgccgccg tgacttcggc agcgaccggg
     2821 gtcggcacgc attcgagcac catgatgctg gcacctgcgg cggccacggc cctggcatct
     2881 tccaccagct ggcgcgcggc atcgccacgg ccctggatct tgaagccacc caggcgcagc
     2941 accgactgcg gggtcaggcc cagatgcgcg cagaccggga tctcgcgctc gaccagatag
     3001 cggatgatgt cgaccttgaa gccggcacct tcgatcttga ccatctcggc accggcctgc
     3061 agcagctgca gcgaggcatc cagcgcgcgt tcgggcgtag cgtcggcgcc aaacggcagg
     3121 tcggccacca gcagcgcacg ctgcagtacg cgggccacgg cgcgggtgtg gtagaccatg
     3181 tcggccacgg tcaccggcag ggtcgaatca tggccctgca cgaccatgcc cagcgagtcg
     3241 ccgatcagga tcaggtcaac gccgtttgcg tcgaaagtgc gggcaaagcc ggcgtcgtag
     3301 gcggtcaaca tgaccagctt ctggccattg cgcttggcct cggccagggc gggaacggtc
     3361 cagggcttgc tgtctgcgtg ggtgctcatg tgctgataac cgggggagat aacccgggca
     3421 ttatcactct atcggcgcga tcccgcaggc atccacccgc atcactgcat cccgcacgcg
     3481 tccatggccg ggaatggcca gatccggtgc gatttcggcc agtggcacca atacgaaggc
     3541 acgctcgtgc aggtacgggt gcggcacctg cagcccgggc tggtcgagtt cctgcgcgcc
     3601 gtacagcagc aggtccaggt ccagcgcgcg cgggccccag tgcaccgccg gatcacgcac
     3661 gcggccgaag cgctgctcca gtgccagcat cgcctgcagc agctcatcgg ctggcagcgc
     3721 ggtatcgacc gcggccaccg cattgacgaa cggcggctgg tcctggttgc cccaggccgg
     3781 cgtggcatac aggcgcgagg cctgctgcag gcgggtcccg ggcagcccgt ccagcgcggc
     3841 aattgccgcg ccgccggtct cagccgcgtc gccgaggttg gcgccgaggc cgatccaggc
     3901 aagggtcatc gcttactcgc ccgccgcacc ggccggggca cccgggcgac gccggcgacg
     3961 gcggcgcttg cgcggcgccc cgctctcgtc atctccctct tcgctgtgca tcgcatccag
     4021 cgacgactcc agttcgcgcc cggactgcgc ctgcgcctcg cgccagaact cgacatcggc
     4081 ggcgtgctcg gccgaagcca cctggcgcag gctgaggaag tcgaacgcgg cgcggaagcg
     4141 cggatgggtc aaggtgcgga acacccgctt gcgctggcgc gagccgaagc gcgactgcag
     4201 cagccagatc tcctgcatcg gcagcgagaa gcggcgcggc agcgcgatgg tgctcagctg
     4261 ctgcacggtc acacggtcgg cggcacgccg ctgtgcctct tccggtgcca cgccctgctt
     4321 gagcagggtc gcctgcgcgc ggcagtaggc cggccacagc agcagcgcga acaggaacgc
     4381 cggcgagacc ggctcgtcat tggcaacgcg cgcatcggtg ttggccaggc cctcgaccag
     4441 catgcggcgc agcgcaccgg tgcggttgga cttgagcgcc ttggcacttt ccgggaacag
     4501 cacatccagc aggccgtagc gctccaggcc ttcgaagctg gccacgccat gcccggacag
     4561 gaacagcttg agcacttcct cgaacaggcg cgccggcgcg gcttcgttga gcaggccagc
     4621 cagatgcgga atcggcgcgg cggtgccctc ttcgatctgg aaaccgagct tggccgccag
     4681 gcgcaccgca cgcagcatgc gtaccgggtc ttcgcggtag cgctgctcgg ggtcgccgat
     4741 cagtttcatc aagcgcgcct gcacgtcttc gaagccgccg gtgtagtcac gcaccgagaa
     4801 gtcctcgatg gcgtagtaca gcgcgttgca ggtgaagtcg cggcggacgg catcgtcttc
     4861 gatggagccg tacacgttgt cgcgcacgag catgccgttt tccatctcgc ggtcgccgct
     4921 gccgtcgtcg ctgttggcac ggaaggtggc cacttcgatg atctcgcggc cgaataccac
     4981 gtgggccagg cggaagcggc ggccgatcag gcggcagttg cggaacagct gcttgacctg
     5041 ttcgggcgtg gcgtcggtgg ccacgtcgaa atccttgggt tggccattga ccagcaggtc
     5101 acgcaccgcg ccgccgacaa ggtaggcgcc gaagccggca tcgcgcaggc gataaagcac
     5161 gcgcagggcg ttcgggctga tgtccttgcg ggagatcgtg tgctggtcgc gcgggatgac
     5221 gcgcaggctg aacggtgatg tagcagagga aatgatgttg gcgcttccgg ttgaagtttc
     5281 gggattgccc aatggcatcg aggtgcatat actagcgctc ctgcctcggc agcgacacag
     5341 ttacgctccc ttcgtctagt ggttaggacg tggccctctc aaggctaaaa caggggttcg
     5401 agtcccctag ggagcgccag tcgccgcagc aggaaccgaa aaagcccgcc tcgcgcgggc
     5461 ttttctgttt tccgggattg ccgatggttg cggtcgggtt ggtcgcgttg gcgcctccct
     5521 gttcctgcgc
//
LOCUS       DAOKIP010000236         5509 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.237,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000236 DAOKIP010000000
VERSION     DAOKIP010000236.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 5509)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5509)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5509
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.237"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            <1..1094
                     /locus_tag="QEL58_003537"
     CDS             <1..1094
                     /locus_tag="QEL58_003537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="HAMP domain-containing histidine kinase"
                     /protein_id="HDS1677967.1"
                     /translation="GDDPRSADGRKVFSAAPLIVQGRQAGYVYVVLVGEHRQMLADDL
                     AAGSQWNTTWWSVMLVGSLGLLAGLVAFYWVTRPLRRLTRRIQAFDIDAPTPLPPPEP
                     LRPGERDELVILEHAHAQMAQRLGEQWQQLRQQDLQRRELVANISHDLRTPLSSLHGY
                     LETLALKDATLSPDERRRYLGIALAQSAKVGRLARALFELARLEHGEVRLEWEVFALP
                     ELLQDVLQKFELAAQARSQRLHADFPPGLPLVRADLGLVERVLTNLLDNALRHAPEGG
                     QIEVRLRATPDSVEVSVADDGPGVAPALRTQLFQAPAALGARRGENGGLGLLIVQRIV
                     QLHGRRIELRDSERGALFVFALPRAEPAG"
     gene            complement(1091..2437)
                     /locus_tag="QEL58_003538"
     CDS             complement(1091..2437)
                     /locus_tag="QEL58_003538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005407949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing protein"
                     /protein_id="HDS1677968.1"
                     /translation="MKRTPSAMRGHAFHFLRYGIGFLVAHLLLIVLGLWAWDALLEDR
                     TEAGLQAEMRGTHALLQHRFAETPREQWPVLARELDADFAYALRMVPLAEAVKELPAS
                     QRPPFNNGRVQIDLEHMRSLQRIGDSDYAVMLGPLDEALPEEGWQDSEVSGVAILLLI
                     LMVAVALPMYVMVYRLWRDVSQLAQAARQMRDGQLDTRAPRAGTALVRPLANAFNHMA
                     EQLQQLLESQRVLAQAVAHEVRTPLARMRFGLADLEDTALDELQRDALGGLRTDVDRL
                     QHLTDAGVEYAALGRCHQLTRQRLQLAALVRGVIAQFAPLPMPVQQVLSPVGLVNVNR
                     HMLELALRNLLGNALRYARRQIRIASTVNDGWLCLQVEDDGPGIAPELRGQVLQPYVR
                     LDPGSPGFGLGLALVQVVADKHGGHVEVTDSDLGGACIRLHLPLETGGVVEGDTAC"
     gene            complement(2434..3123)
                     /locus_tag="QEL58_003539"
     CDS             complement(2434..3123)
                     /locus_tag="QEL58_003539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004141029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HDS1677969.1"
                     /translation="MLDIVLVEDDARLGTMVSDYLQRHGYQVAHERSGERAVARILAE
                     KPALVLLDVGLPDQDGFEVCRQIRPHYDGIICVLTARTDNIDQVLGLELGADDYIGKP
                     IEPRVLLARLRAHLRRHRRVEPRDGSLRFGELSIDPSTRNVHLQGALLELTTAEFDLL
                     FLLASNAGQILDRDALLRGLRGIAFDGLDRSIDARISRLRRKLGDNPEQPERIKTVRG
                     RGYLFSRSAWG"
     gene            3470..5371
                     /gene="asnB"
                     /locus_tag="QEL58_003540"
     CDS             3470..5371
                     /gene="asnB"
                     /locus_tag="QEL58_003540"
                     /EC_number="6.3.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010484091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine synthase (glutamine-hydrolyzing)"
                     /protein_id="HDS1677970.1"
                     /translation="MSGVVGAWLPPAEDEHLLQQLAPMLRALQQRGRGRIGYWTDAEA
                     GLALGHCRAPTDTPLQPLSSDCGRYVLCLDGRLYNRADLQAQLRDLPRNCSDARLLLQ
                     AIVEWGVERALSRIEGAFGFSVWDRESRALWLARDPVGERPLYYGWHQGRFLFASELK
                     ALQAFEGFSPSIDQDALSLLLRHDYVPAPHTIYRGIHKLVAGAMLRIDMNDHAAGHSS
                     MAAQGGSRYWCARDAMHSALQEPLQPAPSLEQATDQLEAVLQKAIAARMHSPLACGAF
                     LSGGTDSSLVTAMMQAQSTLPIEAWTVGFDDPGHDESDWASQVARHLGVQHHLHRMDA
                     RQGLDLLQRLPQVWCEPFADASQLPTLLASELLGARKPVALTGDGGDELFFGHPSYGR
                     ALRNARLCGGLPDWVRDLARRSGNRMNVERGRLGGWRALVAEVAANDVEGHYLQRVTR
                     WRQPAQVVLGAREPVTIFQQQDTALPAEARIQLLDFRMDLAEGILAKVDRAGMAAGVE
                     TRAPLLDMEVVRLAWRLPQHLKYHDGEHKLILKHLLARYLPEPLVYRPKRGFGPPMAR
                     WLAGPLRDWAEALLDPQLLRNQGCFDAVRVRGIWEAFLRGERKWHTHLWNVLMFQAWH
                     QHWHGGRGR"
BASE COUNT          803 a         1852 c         1980 g          874 t
ORIGIN      
        1 tcggcgacga tccgcgcagc gcggatggcc gcaaggtatt cagtgccgcg ccgttgatcg
       61 tgcagggccg tcaggcgggt tacgtgtacg tggtgctggt cggcgagcac cggcagatgc
      121 tcgccgacga cctcgccgcc ggtagccagt ggaacaccac ctggtggtcg gtgatgctgg
      181 ttggcagcct cggcctgctg gccgggctgg tggcgttcta ctgggtaacc cgcccgctgc
      241 ggcggctgac ccggcgcatc caggccttcg acatcgacgc accgacgcca ctgccgccac
      301 cggagcccct gcgccccggc gagcgcgacg agctggtgat ccttgagcac gcgcacgcgc
      361 agatggcgca gcggctgggc gaacaatggc agcagctgcg ccagcaggac ctgcagcggc
      421 gcgagctggt ggccaacatc tcgcatgacc tgcgcacgcc gttgtcgtcg ctgcacggtt
      481 atctggaaac gctggcgttg aaggacgcca cgctgtcacc ggacgaacgc cgccgctatc
      541 tcggcattgc cctggcacag agtgccaagg tcggtcggct ggcgcgcgcg ctgttcgagc
      601 tggcgcggct ggagcatggc gaggtacgcc tggagtggga ggtcttcgcg ttgccggagc
      661 tgctgcagga cgtgctgcag aagttcgaac tggccgcgca ggcgcgcagc cagcgcctgc
      721 atgccgactt cccgccgggc ctgccgctgg tgcgtgccga cctgggcctg gtcgagcgtg
      781 tgctgaccaa tctgctcgac aacgcgttgc ggcatgcgcc cgagggaggc cagatcgagg
      841 tgcgcctgcg cgcaacgcct gacagtgtgg aggtcagcgt ggccgacgac ggccccggcg
      901 tggcgccggc gctgcgcacg cagctgttcc aggcgccggc cgcgctgggc gcgcgacgcg
      961 gcgagaacgg cgggctgggc ctgttgatcg tgcagcgcat cgtgcagctg cacggtcgtc
     1021 gcatcgaact gcgtgacagc gaacgtggcg cactgttcgt gtttgccctg ccgcgcgcgg
     1081 aaccggcggg ctagcaggcc gtatcgcctt ctactacgcc gccggtttcc agcggcaggt
     1141 gcaggcggat gcaggcgccg cccaggtctg aatcggttac ctcgacgtgg ccgccatgct
     1201 tgtcggccac tacctgcacc agcgccaggc caagcccgaa gccggggctg cccgggtcca
     1261 gccgcacata cggttgcagg acctggccac gcagttccgg cgcgatgccg gggccgtcat
     1321 cctccacctg caggcacagc cagccatcgt tcaccgtgct ggcgatgcgg atctgccggc
     1381 gtgcatagcg cagcgcattg ccgagcaggt tgcgcagcgc cagttccagc atgtgccggt
     1441 tgacgttgac caggcccacc ggcgacagca cctgctgcac cggcatcggc agcggggcga
     1501 actgggcgat cacgccgcgc accagcgccg ccagctgcag gcgctggcgg gtcagctggt
     1561 ggcagcggcc gagggcagcg tactcgacgc cggcgtcggt gaggtgctgc agccggtcga
     1621 catcggtgcg caggccgccc aatgcatcgc gctggagctc atccagcgcg gtgtcctcga
     1681 ggtcggccag gccgaaacgc atccgcgcca gcggggtgcg tacctcgtgc gccacggcct
     1741 gcgccagcac gcgttggctt tccagcagct gctgcagctg ttcggccatg tggttgaagg
     1801 cattggccag tggccgtacc agcgcggtac cggcacgcgg cgcgcgcgtg tcgagctggc
     1861 catcgcgcat ctgacgcgcc gcctgggcca actgcgagac gtcgcgccac aggcggtaga
     1921 ccatcacgta catcggcagg gccaccgcca ccatcaggat cagcagcagg atcgccacgc
     1981 cggagacttc gctgtcctgc catccctcct caggcagtgc ttcgtccagc ggccccagca
     2041 ttaccgcgta atcgctgtcg ccgatccgct gcaggctgcg catgtgctcc aggtcgatct
     2101 gcacacggcc gttgttgaac ggcgggcgct ggctggcagg cagctccttc accgcctcgg
     2161 ccagcggcac catgcgcagc gcgtaggcga aatcggcgtc gagttcgcgc gccagcaccg
     2221 gccactgctc gcgcggggtt tcggcgaagc ggtgctgcag caacgcatgg gtgccgcgca
     2281 tctcggcctg caggccggct tcggtgcggt cttctagcag cgcgtcccac gcccacagac
     2341 caagcacgat cagcagaagg tgggcgacca ggaagccgat gccatagcgc aggaagtgga
     2401 aggcgtggcc gcgcatcgcc gagggggtgc gcttcatccc catgccgagc ggctgaacag
     2461 gtagccgcgt ccgcggacgg tcttgatccg ttccggttgt tccgggttgt cgcccagctt
     2521 gcggcgcagg cgcgagatgc gggcatcaat cgagcggtcc agcccatcga aggcgatccc
     2581 gcgcaggccg cgcagcaggg cgtcgcggtc gaggatctgg ccggcgttgc tggccagcag
     2641 gaacagcagg tcgaactcgg cggtggtcag ttccagcagg gcaccctgca ggtgcacatt
     2701 gcgcgtggac gggtcgatgc tcagctcgcc gaagcgcagg ctgccgtcgc gcggctcgac
     2761 ccggcggtgg cggcgcaggt gggcgcgcag gcgggccagc agcacccgcg gttcgatcgg
     2821 cttgccgatg tagtcgtcgg cgcccagttc cagccccagg acctggtcga tgttgtcggt
     2881 tcgggcggtc agcacgcaga tgatgccgtc atagtggggc cgtatctgcc gacacacttc
     2941 gaaaccatcc tggtcgggca ggccgacatc gagcaggacc agggccggct tttcggccag
     3001 gatccgggcc acggcgcgct cgccgctgcg ctcgtgggcg acctggtaac catgccgctg
     3061 cagatagtca ctgaccatcg ttcccaggcg ggcatcgtct tcgaccagta cgatatccag
     3121 cattttcaag gcctccgtgg acgcaaacgt accgccacgg cacgagcgcg gcgatgctat
     3181 cccagccata gggccgcccg ggtccagggg gcgggcgcca ttcagccggg gttgctggcg
     3241 cacgggccgg gtctcagccc cggcaaccac ttggcgccaa gcatagccgg ttgccgttac
     3301 aaaacgttac cttcgtcaca cgtctggtga cgatcgctga cagcaatgcg actgacgcgg
     3361 ggcgggcgcg ggccgagcat ggagtctcct ccgttccgcg tgccgttccc atgtcgcccg
     3421 ccaacctctg cctgccgtgc ctgtcccgcc gccactgcgg aggtgcccga tgagcggcgt
     3481 ggtcggggcc tggttgccgc ccgccgaaga cgagcacctg ctgcagcagc tggcgccgat
     3541 gctgcgcgcg ttgcagcagc gcgggcgggg gcgcatcggc tactggaccg atgccgaggc
     3601 cggcctggca ctgggccatt gccgggcgcc gaccgatacg cccctgcaac cgctgagctc
     3661 ggactgcggc cgctacgtgc tgtgcctgga cggacgcctg tacaaccgcg ccgacctgca
     3721 ggcgcagctg cgcgatctgc cgcgcaactg cagcgacgcg cggctgctgt tgcaggcgat
     3781 cgtcgagtgg ggcgtggagc gggcgctgtc gcgcatcgag ggcgcctttg gtttcagcgt
     3841 atgggaccgc gagtcgcgcg cgctgtggct ggcccgcgac ccggtgggcg agcggccgct
     3901 gtactacggc tggcaccagg gcaggttcct gttcgcgtcg gaactgaagg cgctgcaggc
     3961 ctttgagggt ttctcgccaa gcatcgacca ggatgccctg agcctgctgc tgcgccatga
     4021 ctacgtgccg gcgccgcaca ccatctaccg tggcatccac aagctggtgg ccggcgcgat
     4081 gttgcgcatc gacatgaatg accatgctgc ggggcactcc agcatggccg cgcagggcgg
     4141 ttcgcgttac tggtgtgcac gcgatgcgat gcacagcgcg ctgcaggaac ccctgcagcc
     4201 ggcgccgagc ctggagcagg ccaccgacca gctggaggcg gtactgcaga aggccatcgc
     4261 tgcacgcatg cactcgccgc tggcctgcgg cgcgttcctg tccggcggca ccgactcctc
     4321 gctggtgacg gcgatgatgc aggcgcagtc gaccctgccg atcgaagcgt ggacggtcgg
     4381 cttcgacgat ccgggccacg acgagagcga ttgggcttcg caggtggcgc gccacctggg
     4441 cgtgcagcac cacctgcacc ggatggacgc gcgccagggc ctggacctgc tgcagcggct
     4501 gccgcaggtc tggtgcgagc cgttcgccga cgcctcgcag ctgccgacac tgctggccag
     4561 tgaactgctg ggtgcgcgca agccggtggc attgaccggt gacggtggcg acgaactgtt
     4621 cttcggacat cccagttatg gccgcgcgct gcgcaatgcg cgcctgtgtg gtggcctgcc
     4681 ggactgggta cgtgacctgg cgcggcgcag cggcaaccgc atgaacgtcg agcgtggccg
     4741 cctcggtggc tggcgcgcac tggtggccga ggtcgccgcc aacgatgtgg aaggtcatta
     4801 cctgcagcgc gtgacccgct ggcggcagcc ggcgcaggtg gtgctgggcg cgcgcgaacc
     4861 ggtgacgatc ttccagcagc aggacacggc gctgccggcc gaggcgcgca tccagctgct
     4921 cgatttccgc atggatctgg ccgaaggcat tctcgccaag gtcgatcgcg cgggcatggc
     4981 ggcgggcgtt gaaacccgtg cgccgctgct ggacatggag gtggtgcgcc tggcctggcg
     5041 cctgccgcag catctgaagt accacgatgg cgagcacaag ctgattttga agcacctgct
     5101 ggcgcgctac ctgcccgagc cgctggtgta ccgccccaag cgcggcttcg gcccgccgat
     5161 ggcgcgctgg ctggcgggtc cgctgcgcga ttgggccgag gcgctgctgg atccgcagct
     5221 gctgcgcaac cagggctgct tcgatgcggt gcgcgtgcgc ggcatctggg aggcgttcct
     5281 gcgcggcgag cgcaagtggc acacgcactt gtggaacgtg ctgatgttcc aggcgtggca
     5341 ccagcattgg cacggtggtc gcgggcgctg aggttccttc gcggattgtt ctgcgcggcg
     5401 cagggcggag gcccttgcgt acgaatgtcc tccggcgcgt cgttgaaagg ctgctgcgag
     5461 cactgcgctt tacctgccgc aagccgagcc tcgtcggggc ccatccgtt
//
LOCUS       DAOKIP010000237         5450 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.238,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000237 DAOKIP010000000
VERSION     DAOKIP010000237.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 5450)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5450)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5450
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.238"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            26..2821
                     /gene="glnE"
                     /locus_tag="QEL58_003541"
     CDS             26..2821
                     /gene="glnE"
                     /locus_tag="QEL58_003541"
                     /EC_number="2.7.7.42"
                     /EC_number="2.7.7.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012509865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional [glutamate--ammonia
                     ligase]-adenylyl-L-tyrosine
                     phosphorylase/[glutamate--ammonia-ligase]
                     adenylyltransferase"
                     /protein_id="HDS1677971.1"
                     /translation="MTLAPAELPATLQPLVDRALARLAQVLPEPIPPDLQPLLTRLAV
                     ASDFALDTLVRQPALLAQLAAPACPPIPAPVLDPLQPSDWPSQLRRWRTAMSTRLIWR
                     DLAGLDDVAQTLAGATTLAEDCLRLALDALQQEFAQRHGVIRDDHGQPMQLVVFGLGK
                     LGGGELNFSSDIDLVYAYPQGGESDGPRALAAEEYFARLGQRLAKLLDETTVDGFSHR
                     VDLRLRPFGSAGRVALSFAAMDQYFQREGRDWERYAWLKARAVAGDIEAGEAWLQTLR
                     PFVYRRYLDFTALDGLREMKAAITAEVARRELHEDIKRGAGGIREIEFLCQALQLIRG
                     GREPALRERRLLVALAALVAAGQIAPGDGAALREAYLFLRRLENRLQMLRDAQTHVLP
                     GDTLDRERIAIGLGYPDWEVLRAALAAQQQRVSTEFAALLAPRKGQAAPDALANYWRS
                     LPDGSNAPLLAEAGFLDANGADQSLRDFAQGTGVKSLSDAARARLDRVLPALLHAATR
                     SPQPDAALKRVLGLLQAVLRRTSYLALLDEQPSALARLVDVLARSALLAERLAAYPLL
                     LDELLDVRVSGPMPDAAGMLAECQQVLSVEDPESALRWLNETRLALSFRMAMATLDGR
                     QGAVDSTRQLAELAQAVVITVLAMAEADMRAAHGEIPGGRFAIIGYGSLGGLELGFGS
                     DLDLVFLHDNPAGVDASDGARPLEPGRWYARLAQKVMALLGAVTAAGRLYDIDVRLRP
                     DGGKGSLVSSLASYTDYQRERAWTWEHQALVRARGVAGDASLLAAFEQVRAQTLGRER
                     DRATLYADVMKMRGRMRTELDRSDAARLDLKQGAGGVVDLEFLLQTGVLARSAQVPAL
                     LEPRDTPSLIDALGAAGFLPEATTQALHTAHATLLEVGLACTLDRRPRLAPTTPAIEE
                     ACAAITSACVEAKLPFA"
     gene            complement(3062..3622)
                     /locus_tag="QEL58_003542"
     CDS             complement(3062..3622)
                     /locus_tag="QEL58_003542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012478962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="queuosine precursor transporter"
                     /protein_id="HDS1677972.1"
                     /translation="MSVRPAPVFAPLTPRALVLAVLAMGAVVLLSNVLVQYPINDWLT
                     WGAFSYPVAFLVSNLINRRFGPGPARRVAWIGFLVAVLLSIWVATPRIAIASCSAFIV
                     AQLLDITVFDRLRRGSWWRAPMVATTCSATVDTTIFWSIAFAGSALPWVSWAAGDLAV
                     KLAIGVCLLAPFRALLWKMAPLRATS"
     gene            complement(3697..4212)
                     /locus_tag="QEL58_003543"
     CDS             complement(3697..4212)
                     /locus_tag="QEL58_003543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005412056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677973.1"
                     /translation="MFRCLRVPASALLLSALLVPTVHAGAAPQLNSSQASVIVTSFVV
                     LSLPMAASMGLSELSKAPFKASERNGKATRTKAVPLPPMEVKKVETTPEGECQVQLQV
                     PDKADHTATLRWTVQPQGENPTAAFVVGQQVHFDPTDAGAGWNVKSAQGQTLAYVPTA
                     YAAGDVMSEAL"
     gene            complement(4248..5099)
                     /locus_tag="QEL58_003544"
     CDS             complement(4248..5099)
                     /locus_tag="QEL58_003544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005415043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2145 domain-containing protein"
                     /protein_id="HDS1677974.1"
                     /translation="MDRFYRLPRAALLIASLLATAAAWANSTECRERFPSVAAQAAML
                     DVAWTTAERLDALPDVDVVVAARGGQDLSRYGLRHSHLAFLLREDDGRWRAMHLLNRC
                     KTDSSQLYHEGLGNFVGESGGHTDLRIGVPSAPLRAALRAMLVSPSIQPKALHESKYN
                     VVAYPFATDYQNSNQWVLEVLAAAMAQSEGAPAIVKREQAQQWLRQQKYQPSVLHIGL
                     GKRVGARLFVANATTTDHPASERISGNYSVVTVESVFDFLHQRSQLQQELVIPHVPVA
                     GAAAATP"
     gene            complement(5148..5375)
                     /locus_tag="QEL58_003545"
     CDS             complement(5148..5375)
                     /locus_tag="QEL58_003545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005415044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677975.1"
                     /translation="MRTLLLLPLALLAACSTSPTELDPISYQCQQQLDAYREQPALRD
                     PKGQRPPLPVAPISDACDRELKRKGVDRPLR"
BASE COUNT          850 a         1849 c         1925 g          826 t
ORIGIN      
        1 ccggccgggt cgatacaatc gggccatgac cctcgccccc gctgaactgc ccgctaccct
       61 gcagcccctt gtcgaccgtg ccctggcgcg cctggcccag gtcctgcccg agccgatccc
      121 gcccgacctg cagccgctgc tgacccggct ggcggtggcc agcgacttcg cgctggatac
      181 gctggtgcgg caaccggcgc tgctggcgca gctggccgcg cccgcgtgcc cgccgatccc
      241 ggcgccggtg ctcgacccgc tgcagcccag cgactggcct tcacagctgc ggcgctggcg
      301 cacggcgatg tcaacgcggc tgatctggcg cgaccttgcc gggctggacg acgtggcaca
      361 gaccctggcc ggcgccacca ccctggccga agactgcctg cggctggcgc tggacgcgct
      421 gcaacaggaa ttcgcgcaac gccacggggt catccgcgat gaccacggcc aacccatgca
      481 gctggtggtg ttcgggctcg gcaagctggg cggtggcgag ctcaacttca gttccgacat
      541 cgacctggtc tacgcctacc cgcagggcgg cgaatccgac ggcccgcgcg cgctggccgc
      601 cgaagagtac ttcgcccgcc tcggccagcg cctggccaaa ctgctggacg aaaccaccgt
      661 cgatggtttc agccaccgcg tcgacctgcg cctgcgcccg ttcggtagtg ccggccgcgt
      721 tgcgctgtcg ttcgcggcga tggaccagta cttccagcgc gagggccgcg actgggagcg
      781 ctatgcgtgg ttgaaggcgc gtgccgtggc cggcgacatc gaggccggcg aagcgtggct
      841 gcagaccctg cgcccgttcg tgtaccgccg ctacctggat ttcaccgcgc tcgatggcct
      901 gcgcgagatg aaggctgcga tcaccgccga agtcgcgcgg cgcgaactgc atgaggacat
      961 caagcgcggt gccggtggca tccgcgaaat cgagttcctg tgccaggcgc tgcagctgat
     1021 ccgcggcggc cgtgaaccgg cactgcgcga gcgtcgcctg ctggtggcgc tggcggcact
     1081 ggtggcggcc gggcagatcg cgcccggtga tggcgccgcg ttgcgcgagg cctatctgtt
     1141 cctgcgcagg ctggaaaacc gcctgcagat gctgcgcgat gcgcagaccc atgtgctgcc
     1201 cggtgacacg ctggaccgtg agcgcattgc catcggcctc ggctacccgg actgggaagt
     1261 gctgcgcgcg gcgctggccg cacagcagca gcgggtcagt accgaattcg ccgcgctgct
     1321 ggcaccgcgc aagggccagg ccgcgcccga tgcgttggcc aactactggc gcagcctgcc
     1381 cgacggcagc aacgcgccgt tgctggctga agccggtttc ctcgacgcca acggcgccga
     1441 ccagtcgctg cgtgatttcg cccagggcac gggtgtgaag tcattgtccg atgccgcgcg
     1501 tgcgcggctg gatcgcgtgc tgccggcgct gctgcatgcg gccacgcgct cgccgcagcc
     1561 cgatgccgcg ctcaagcgcg tgctcggcct gctgcaggcg gtgctgcgcc ggaccagcta
     1621 cctggcgctg ctggacgaac agcccagcgc gctggcgcgg ctggtcgatg tgctggcgcg
     1681 cagtgcactg ctggccgagc ggctggccgc ctatccgctg ctgctggatg agctgctgga
     1741 cgtgcgcgtg tccgggccga tgcccgatgc cgccggcatg ctggccgagt gccagcaggt
     1801 gttgtcggtg gaagatcccg aatccgcgct gcgctggctc aacgaaacgc ggctggcgct
     1861 cagcttccgc atggcgatgg ccacgctgga tggccgccag ggcgcggtgg acagcacgcg
     1921 acaactggcc gagctggcac aggcggtggt gatcaccgtg ctggcgatgg ccgaggcgga
     1981 catgcgggct gcacacggtg agattcccgg tgggcgcttt gcgatcatcg gctacggcag
     2041 cctcggcggc ctggagctgg gcttcggttc cgatctggat ctggtgttcc tgcacgacaa
     2101 cccggccggc gtggacgcca gcgatggcgc gcgtccgctg gagccggggc ggtggtatgc
     2161 gcgcctggcg cagaaggtga tggcgctgct tggcgcggtc accgccgccg gccgcctgta
     2221 cgacatcgac gtgcgcctgc gcccggatgg cggtaagggc tcgctggtgt cttcgctggc
     2281 cagttacacc gactaccagc gcgaacgcgc gtggacctgg gaacaccaag cgctggtgcg
     2341 cgcgcgtggc gtggccggcg atgccagcct gctggccgcc tttgagcagg tgcgtgcgca
     2401 gacgctgggc cgcgagcgcg accgggccac gctgtatgcc gacgtgatga agatgcgcgg
     2461 gcgcatgcgc accgaactgg accgcagcga tgccgcgcgg ctggacctga agcagggcgc
     2521 cggtggcgtg gtggatctgg aattcctgct gcagaccggc gtgctggcgc gcagtgcgca
     2581 ggtgccggcg ctgctcgagc cgcgcgacac accgtcgttg atcgatgcgc tgggcgccgc
     2641 cggtttcctg cccgaagcca ccacgcaggc gctgcacacc gcgcacgcga cgttgttgga
     2701 ggttggcttg gcctgcacgc tggatcggcg gccacggctg gcaccgacca ccccggccat
     2761 tgaagaggcg tgtgcggcga tcacttcggc gtgcgttgaa gcgaagctgc cgttcgcctg
     2821 acaggcagca atggcccggc gatgccccgc tgttggtagg tgccaacctt ggttggcaca
     2881 acccatcagc gttcatgacc ctggcaacag cgcgccaacc aaggtcggca cccaccagag
     2941 caatggcccg gcgatgcccc gctgttggta ggtgccaacc ttggttggca caacccatca
     3001 gcgttcatga ccccggcaac agcgtgccaa ccaaggttgg cacctaccag ggcaacggcg
     3061 gtcagctggt ggcgcgcagc ggcgccatct tccacagcag tgcgcggaac ggggccagca
     3121 ggcacacgcc gatcgccagc ttcaccgcca ggtcgccggc ggcccagctc acccacggca
     3181 gcgccgaacc ggcaaacgcg atcgaccaga aaatggtggt atccacggtg gcactgcagg
     3241 tggtggccac catcggcgcg cgccaccagc tgccacggcg caggcgatcg aacacggtga
     3301 tgtccagcag ctgcgccacg atgaacgccg agcacgaagc aatggcgatg cgcggcgtcg
     3361 ccacccagat cgacagcagc accgccacca ggaacccgat ccacgccacg cggcgggccg
     3421 ggcccgggcc gaagcggcgg ttgatcaggt tgctgaccag gaacgcgacc ggataactga
     3481 aggcgcccca ggtcagccag tcattgatcg ggtactgcac cagtacgttg gacagcagca
     3541 ccaccgcgcc catcgccagc accgccagca ccagggcgcg cggggtcagc ggggcaaaca
     3601 caggggcagg acgcacggac atggcgagcc agggaataaa ggggatcgcc cattatccgc
     3661 ccggcccgcg gcaaatccaa aaccgctcgt tcagttttac agcgcttcgc tcatcacatc
     3721 gccagcggca tacgcggtcg gcacgtacgc cagggtctgg ccctgtgcgc tcttcacatt
     3781 ccagccagcg ccggcgtcgg tagggtcgaa atgcacctgc tggcccacca cgaaggcggc
     3841 ggtcgggttt tcgccctgtg gctgcacggt ccagcgcagg gtggcggtgt ggtcggcctt
     3901 gtccggcacc tgcagctgca cctggcactc gccctccggc gtggtctcca ccttcttcac
     3961 ttccatcggc ggcagcggta ccgccttggt gcgggtggct ttgccgttgc gctcgctggc
     4021 cttgaacggc gccttggaca gttcggacag gcccatcgag gccgccatcg gcagcgacag
     4081 caccacgaac gaggtcacga tcacgctggc ctggctgctg ttcaactgcg gcgcagcgcc
     4141 cgcatggacg gtgggcacca gcaaggcgga aagcagcagg gcagaggcag gaacgcgcag
     4201 gcaacggaac atgggacctc ctggtcgcca gaaaaagggg atgaaattca cggagtggcc
     4261 gcggccgcac cggccaccgg cacatggggg atcaccagtt cctgctgcag ctggctgcgc
     4321 tggtgcagga agtcgaacac cgattccacc gtcaccaccg agtagttgcc ggagatgcgt
     4381 tcgctggccg gatgatcggt ggtggtggcg ttggccacga acaggcgcgc acccacgcgc
     4441 ttgcccaggc cgatgtgcag cacgctgggc tggtacttct gctggcgcag ccactgctgc
     4501 gcctgttcgc gcttgacgat ggccggcgcg ccctcgctct gcgccatcgc cgcggccagc
     4561 acttccagca cccactggtt ggagttctgg tagtcggtgg cgaacgggta ggccaccacg
     4621 ttgtacttcg attcgtgcag tgccttgggc tggatcgagg gcgataccag catcgcccgc
     4681 agtgccgcac gcagcggcgc ggacggcacg ccgatgcgca gatcggtatg gccaccgctc
     4741 tcgccgacga agttgcccag gccctcgtgg tacaactgcg aactgtcggt cttgcagcgg
     4801 ttgagcaggt gcatcgcgcg ccagcggccg tcgtcctcgc gcagcaggaa ggccagatgg
     4861 ctatggcgca ggccatagcg gctcaggtcc tggccaccgc gcgcggccac caccacgtcc
     4921 acatcgggca gcgcatcgag gcgttcggcg gtggtccagg ccacatccag catggcggcc
     4981 tgtgcggcca cgctggggaa gcgctcgcgg cactcggtgc tgttggccca ggccgctgcg
     5041 gtcgccagca ggctggcgat cagcagcgcg gcgcgcggca ggcgatagaa acgatccatg
     5101 tcggtacctt caacggcggt gagggccgcg tgccgatcat acgccggtca gcgcagcggg
     5161 cggtccacgc ccttgcgctt gagttcgcgg tcgcaggcgt cgctgatggg tgccaccggc
     5221 aacggcgggc gctggccctt cggatcgcgc agcgccggtt gttcgcggta cgcgtccagc
     5281 tgctgctggc actggtagga gatcgggtcc agctcggtgg gcgacgtgga gcacgcggcg
     5341 agcagggcca gcggcagcag gagcagggtg cgcatgaagg cgttcagagt gattggggaa
     5401 gctggactct aaccgcgcag gcacatcgag atgttcaaaa aacgctgggc
//
LOCUS       DAOKIP010000238         5446 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.239,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000238 DAOKIP010000000
VERSION     DAOKIP010000238.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 5446)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5446)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5446
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.239"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(76..2505)
                     /locus_tag="QEL58_003546"
     CDS             complement(76..2505)
                     /locus_tag="QEL58_003546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005414721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3772 domain-containing protein"
                     /protein_id="HDS1677976.1"
                     /translation="MAGVSSFLRSIRARGPWLALLLCSVFLLSAPVLAQDEDPTPKQQ
                     LADIDAKLKEVDRKRGDAAAIETLAMLSEDASKARRDAEALEKSLQPQLDRLDEQLAQ
                     LGTPAEGATEPPELAAQRRTLNKQRDGLAASVAQAKTNAVRAQQLATDIDQQRAAQRT
                     EELGQKVASPLSPALWSKVAERLPIDIARVAPLAEQGRDAFVAGIRANGWGTPLLGLV
                     AALVMMFPLRLWLRRLGRQFAASDRAPDGRLRRSGLAMWLLLVGTLLPGYAVVVFIAS
                     LNAIGAIAPRLQNVADGVQQATFAAAFIAALSACLLVPSRPSWRLLNLDDTAALKLRK
                     YAWGAAALAWLSTVLVAIDQATRTSDVTTVALDGVIALTYLGLIMAMLVTLARLHRRQ
                     TAEAEAKLEAQAEGLGASTPVRRSSWLVLARVAGNIAVVAAIIATLLGYLNFAKFVNQ
                     QLIGGSIVVLAATLLFKFVDDLSTWMLNADSKVGQTILLSTGLSVSRLEQAGVLLSAA
                     LRTIVVLIALLALVAPFGNIGAVVERFSSLFTSGFDVGGTKLEPVRIVLAVLVLLAGL
                     AITQLVQRWLTDTYLPKTELDLGARNSVSTVARYVGIIIAVIWALSAMGLQLSKLALL
                     VSALSVGIGFGLQVITQNFVSGLILLAERPVKIGDWVKLGDQEGDIRRISLRSTEIQV
                     GDKSTLIVPNSELVTKTVRNMTMGNNQGRIQIQFAVPPSTDVGNLRQALLDAYTAHTN
                     VLKQPAPTVYIDSIAGGQITINSFAYVASPRQVYSTRSDLYFSLLQILAERNIPLSTP
                     TDIHITRDPQE"
     gene            complement(2593..2841)
                     /locus_tag="QEL58_003547"
     CDS             complement(2593..2841)
                     /locus_tag="QEL58_003547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014648700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677977.1"
                     /translation="MYQVILLKSESAFAREQWPQVDDLVDYEGVSYSLRAGPRQPLPT
                     DHDWPPVAVYAPDEITEEEFQDWYALQQPTVEELRLKY"
     gene            3023..3517
                     /locus_tag="QEL58_003548"
     CDS             3023..3517
                     /locus_tag="QEL58_003548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012481467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipocalin family protein"
                     /protein_id="HDS1677978.1"
                     /translation="MTDHPPLKTVADLKLPRYLGTWYEIARLPMRHEPEGCTDVSAHY
                     TLLDNGNVGVTNRCRMDGEIEEASGEACAVDNDSARLEVSFLPKGLRWLPFAKGDYWV
                     IQIAPDYSVSLVGSPDRRYLWLLAREPRLDATVQDHYLAAARLQGFDLSELIQTPHTG
                     HPTA"
     gene            3530..4741
                     /locus_tag="QEL58_003549"
     CDS             3530..4741
                     /locus_tag="QEL58_003549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HDS1677979.1"
                     /translation="MDLKSGYPWWAVRNGLIHAFPPLQQDLRCDVLVVGGGITGALIA
                     DELSHHGHDVAVIEQRDIGWGSTAASTALLQYEIDTHLLELTERYGQDAAALAYRACA
                     EAIPALGDVARGLKDVDFQRMDSLYLASRHRDVPRLMAEGAARRGIGLDARWLGPEVL
                     RERFDVDAGGALLTRQAARVDPYRLTYALLQRVRRRGGHVHDRTVLHTLTPGPRGVRA
                     LTEAGATVHARHVVLAMGYANQRWLEQRVARNRSSYAFITDPIDADVLGRLRNTMVWE
                     SARPYLYLRATGDRRLLVGGLDDAIDIPARRDRRVERKADKLMKQLRHWFPRLDPVPA
                     FSWAGTFAETADGLPFFGPHAQWGPRVHFAMAYGGNGITYSMIGAQLLRARIERRKHA
                     LEGLFSFERLP"
     gene            4944..5423
                     /locus_tag="QEL58_003550"
     CDS             4944..5423
                     /locus_tag="QEL58_003550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006399397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1677980.1"
                     /translation="MIRPLTLLLCLALPGTVLAQSAAGATAPQAAGLDLSLPQAPMRY
                     LNDPALQQDPPGTYYGDKSGPRVHDDARIADVTDDKVKVSGSFTTGIGYSKNGGNSHY
                     NAATLNLSKNYTTDEGKTHGVNVNIHVSEGKGPGFFGPYGGYYGRGPGWDYPPPYGW"
BASE COUNT          906 a         1924 c         1780 g          836 t
ORIGIN      
        1 tgcacgctgt tgctgttgct gttgcgtttg ctctagcccg tagcgggtgc agggcgcagc
       61 cctgcaaaga aacccctact cctgcggatc gcgggtgatg tggatgtcgg tcggggtcga
      121 cagcggaatg ttccgctccg ccaggatctg caacaggctg aagtacagat cgctgcgggt
      181 ggaatacacc tgccgcgggc tggccacgta cgcaaagctg ttgatggtga tctggccacc
      241 ggcaatgctg tcgatgtaga ccgtcggtgc cggctgcttc agcacgttgg tatgcgcggt
      301 gtacgcatcc agcagcgcct ggcgcagatt gccgacatcg gtgctgggcg gcactgcgaa
      361 ctggatctgg atgcgcccct ggttgttgcc catcgtcatg ttgcgcacgg tcttggtgac
      421 cagctccgag ttgggcacga tcagcgtcga cttgtcgccc acctggattt cggtcgagcg
      481 caggctgatg cggcggatgt cgccttcctg gtcgcccagc ttcacccagt cgccgatctt
      541 caccgggcgc tcggccagca ggatcaagcc ggacacgaag ttctgtgtga tcacctgcag
      601 gccgaagccg atacctaccg acagcgcgct gaccagcaac gccagcttgc tcagctggag
      661 gcccatggcc gacagcgccc agatcaccgc gatgatgatg cccacgtaac gggcgacggt
      721 actgaccgag ttgcgtgcgc ccaggtccag ttcggtcttg ggcaggtagg tgtcggtcag
      781 ccagcgctgc accagctggg tgatcgccag gccggccagc agcaccagca ccgccagcac
      841 gatccgcact ggttccagct tggttccacc gacgtcgaat cctgaggtga acagcgaaga
      901 gaaccgctcc accaccgcgc cgatgtttcc gaacggcgcc accagcgcca acagcgcgat
      961 cagcacgaca atggtgcgca gcgctgccga cagcagcacg ccggcctgct ccagccgcga
     1021 cacgctcagg ccggtgctga gcaggatggt ctggccaacc ttgctgtcgg cattgagcat
     1081 ccaggtgctc aggtcatcaa cgaacttgaa cagcagcgtc gccgccagca ccacgatgct
     1141 gccgccgatc agctgctggt tcacgaactt ggcgaagttc aggtagccca gcaacgtggc
     1201 aatgatggcc gccaccaccg cgatgttgcc tgccacgcgc gccagcacca gccagctgct
     1261 gcgccgcact ggcgtactcg cccccaatcc ctcggcctgt gcttccagct tggcctcggc
     1321 ctcggcggtc tgccgccgat gcaggcgcgc cagcgtcacc agcatggcca tgatcaggcc
     1381 caggtaggtc agcgcgatca caccgtccag cgccaccgtg gtgacatcgc tggtgcgcgt
     1441 ggcctggtcg atggcgacca gcaccgtgct cagccaggcc agcgcggccg cgccccaggc
     1501 gtacttgcgc agcttcagcg cagcggtgtc atccaggttc agcagccgcc acgagggccg
     1561 cgacggcacc agcaggcagg cactgagcgc agcgatgaac gcggcggcga aggtggcctg
     1621 ctgcacgccg tcggccacgt tctgcaggcg cggcgcaatc gcaccgatgg cgttgagcga
     1681 ggcgatgaac accactaccg catagccggg cagcagcgtg cccaccagca acagccacat
     1741 ggccagcccg gaacggcgca ggcggccatc gggtgcacgg tcggacgcag cgaactgccg
     1801 ccccaggcgg cgtagccaca accgcagcgg gaacatcatc accagcgcgg ccaccaggcc
     1861 cagcaacggc gtgccccagc cattggcgcg gataccggcg acgaacgcat cgcgtccctg
     1921 ctcggccaac ggcgcaaccc gtgcgatatc gatcggcagg cgctcggcca ccttgctcca
     1981 cagcgcaggc gacagcggtg aggcgacctt ctgccccagc tcctcggtgc gttgcgcggc
     2041 gcgctgctgg tcgatgtcgg ttgccagctg ctgggcgcgc acggcattgg tcttcgcctg
     2101 cgccaccgat gcggccagtc cgtcgcgctg cttgttgagg gtgcgccgtt gcgccgccag
     2161 ttcgggcggc tcggtggcgc cctcggcagg cgtgcccagc tgcgccagct gttcgtcgag
     2221 gcggtccagc tgcggctgca gcgacttctc cagcgcctcg gcgtcacgtc gcgctttcga
     2281 agcgtcctcg gacaacatgg ccaatgtttc gatggccgca gcatcaccac gcttgcggtc
     2341 gacttccttc agcttcgcat cgatatccgc cagctgctgt ttcggcgtgg ggtcctcgtc
     2401 ctgcgccagc accggcgcgg acagcaggaa gacgctgcac agcagcaggg ccagccacgg
     2461 gccccgtgca cggatcgatc gcaggaaaga agacacgcca gccacaccgg ttcgcgcgga
     2521 ccaccgcgcc tgcgcgcgac tatacggcac cgccgataaa gggcgggtgg gcagccccgg
     2581 cagcgtcgag cgtcagtact tcaggcgcaa ctcttccacc gtgggctgct gcagcgcata
     2641 ccagtcctgg aactcttcct cggtgatctc gtcgggcgca tacaccgcca ccgggggcca
     2701 gtcgtggtcg gtcggcagcg gctggcgcgg gccggcgcgc aggctgtagc tcacgccttc
     2761 gtagtcgacc aggtcatcga cctgcggcca ctgctcgcgc gcgaacgcgg attcactctt
     2821 caacaggatc acctggtaca tcggcacctc cacctcggtt ggatcaggaa aatccggcgc
     2881 tggaggcagg ataccgccac gccgatgaca acgcgcactc cgccggggcg acggaacgtt
     2941 ctggacatgg ccctcgcccc ggcttcaccc gcccatggca aggccatcgg catcgtggag
     3001 gcccacccct gccactacgc cgatgaccga ccacccaccg ctgaagaccg tcgccgacct
     3061 caagctgccc cgctacctgg gcacctggta cgagatcgcg cgcctgccga tgcgccacga
     3121 gccggagggg tgcaccgacg tgtcggcgca ctacaccctg ctcgacaacg gcaacgtcgg
     3181 cgtcaccaac cgctgccgca tggacggcga gatcgaagag gccagtggcg aggcctgtgc
     3241 cgtcgacaac gacagcgcgc gcctggaagt gagcttcctg cccaagggcc tgcgctggct
     3301 gccgtttgcc aagggcgact actgggtgat ccagatcgcc ccggactaca gcgtgtcgct
     3361 ggtcggcagc ccggaccgca ggtacctgtg gctgctggcg cgcgagccgc ggttggacgc
     3421 gaccgtgcag gaccattatc tggcggcggc tcgcctgcag ggcttcgatc tgtccgaact
     3481 gatccagacc ccgcacaccg gccaccccac tgcctgagct tcgtcgcgca tggacctgaa
     3541 gagtggctac ccgtggtggg cagtacgcaa cggcctgatc cacgccttcc cgccgttgca
     3601 gcaggacctg cgctgcgacg tgctggtggt cggcggcggc atcaccggcg cgctgatcgc
     3661 cgacgagctg tcccaccatg gccacgatgt ggcggtgatc gagcagcgcg acatcggctg
     3721 gggcagcacc gccgccagca ccgcgctgct gcagtacgag atcgataccc acctgctgga
     3781 actgaccgaa cgctacgggc aggacgccgc tgcactggcg taccgggcct gcgcggaggc
     3841 aatcccggcg ctgggcgacg tggctcgtgg cctgaaggac gtggacttcc agcgcatgga
     3901 cagcctgtac ctggccagcc gccatcgcga cgtgccacgc ctgatggccg agggcgccgc
     3961 gcggcggggc atcggcctgg atgcgcgctg gctgggcccg gaggtgctgc gggaacgctt
     4021 cgacgtggat gccggtggcg cgctgctgac ccgccaggcg gcacgggtcg acccctaccg
     4081 gctgacctat gcgctgctgc agcgcgtgcg ccggcgtggc ggccacgtgc atgaccgtac
     4141 cgtgctgcac acgctcacgc cgggcccgcg aggcgtgcgt gcgctgaccg aggccggcgc
     4201 caccgtccac gcccgccacg tggtgctggc catgggctat gccaaccagc gctggcttga
     4261 acagcgggtc gcacgcaacc gcagcagcta cgccttcatc accgatccga tcgatgccga
     4321 cgtgctgggc cggctgcgca acacgatggt gtgggagagc gcccgcccct atctgtacct
     4381 gcgcgccact ggcgaccgcc gcctgctggt gggcgggctg gatgatgcca tcgacatccc
     4441 cgcccgccgc gaccggcgcg tagagcgcaa ggccgataaa ctgatgaaac agctgcggca
     4501 ttggttccca cggctggatc cggtgcctgc cttctcctgg gccggcacct tcgctgaaac
     4561 ggccgatggc ctgccgttct tcggcccgca cgcgcagtgg gggccccggg ttcatttcgc
     4621 catggcctac ggcggcaacg gcatcaccta ctcgatgatc ggcgcgcagc tgctgcgggc
     4681 ccggatcgag cggcggaagc atgcgctgga agggctgttc agctttgaac ggttgccgta
     4741 gcgcccacct tttgtagagt cgagccatgc tcgactgccg tcggcaggag cagtcgagca
     4801 tggctcgact ctacagaggc tgcaatcgag caggcccgga tctaccgcaa gcggccgccg
     4861 acaggcatca ttcaagcaac ccctgctagc gtcggcctgt accgccgcgt gttgcgtggc
     4921 cacctgtccg ctggagcgcc gtcatgatcc gccccctgac cctgctgctg tgcctggccc
     4981 tgccgggaac cgtgctggcc cagtccgctg ccggcgccac cgcgccgcag gcggccggcc
     5041 tggacctgtc gctgccgcag gcgccgatgc gctacctcaa cgacccggcc ctgcagcagg
     5101 acccgcccgg cacctactac ggcgacaaga gcggcccgcg cgtgcacgac gacgccagga
     5161 tcgccgacgt gaccgacgac aaggtcaagg tgtccggcag cttcaccacc ggcatcggct
     5221 attccaagaa cggtggcaac agccactaca acgccgccac gctgaacctc agcaagaact
     5281 acaccaccga tgaaggcaag acccacgggg tcaacgtcaa catccacgtg agcgaaggca
     5341 agggcccggg cttcttcggc ccgtacggcg gctactacgg ccgcggcccg ggctgggatt
     5401 acccgccgcc gtacggctgg taacgccgac cctctagagc cgagcc
//
LOCUS       DAOKIP010000239         5389 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.240,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000239 DAOKIP010000000
VERSION     DAOKIP010000239.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 5389)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5389)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5389
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.240"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(72..1649)
                     /locus_tag="QEL58_003551"
     CDS             complement(72..1649)
                     /locus_tag="QEL58_003551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010483981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BCCT family transporter"
                     /protein_id="HDS1677981.1"
                     /translation="MVFRISIALVLVLVLLAGFAPGPFNTVVQSVLADVIRSVGWLYL
                     LVVFLALTFLMYLAFGRFGNLRIGGEDAEPEFSRASWMSMLFAAGMGIGLVFWGAAEP
                     ISHFTKPPEGLAPQSMDAARASMRYAFFHWGLHPWAIYALIGLAMAWFQFNRNGRGLV
                     SDMLQPIIGRHHRGWIGRVVNIAAVVATAIGVATTLGFGTIQIAAGMERVFGLHAGVP
                     LQLTIIAIAFVLYMASTASGVERGVKWLSNFNLALAALLAATVLVLGPTGFIFDTFTT
                     TLGSYLNQLVTMSLRMSPFSGSTWVADWTIFYWAWWISWAPFVGSFIARISRGRSVRE
                     FVIGVVLAPTVLGFFWFAVFGGTALWAQIFGHADLVQALGNGYETVLFTLFDSMPLPL
                     LLSCIALVLLMIFFVTSADSAVLVLASMSTDEAGDPPLKRKLAWGIAVALIAAALLLA
                     GGLDALQGMITIAALPFALLMVLVMVSLYRVLDQEYTRERRQAQRQRHMIDAWIAREM
                     AAQEETQAEAARAQDSD"
     regulatory      1896..1997
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            2080..3924
                     /gene="thiC"
                     /locus_tag="QEL58_003552"
     CDS             2080..3924
                     /gene="thiC"
                     /locus_tag="QEL58_003552"
                     /EC_number="4.1.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014038398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomethylpyrimidine synthase ThiC"
                     /protein_id="HDS1677982.1"
                     /translation="MNAQLSALQQQAQQLSESVTRPIPGSRKIHVPGSRPDLQVPMRE
                     IALTRTPTLFGGEENAPVTVYDTSGPYTDPEVRIDLSAGLPALRRGWVEERGDTEQLE
                     GLSSSFGRDREHDPKLDAVRFPARTLPRRARAGANVTQMHYARRGIITPEMEFVAIRE
                     NQRLDAIRDAGLLQQHPGEAFGASIQKIITPEFVRDEIARGRAVLPNNINHPESEPMI
                     IGRNFLTKINANIGNSAVSSGIAEEVEKLVWAIRWGGDTVMDLSTGKHIHETREWIIR
                     NSPVAIGTVPIYQALEKVDGRAEALTWEIFRDTLIEQAEQGVDYFTIHAGVLLRYVPL
                     TAKRVTGIVSRGGSIMAKWCLAHHRENFLYTHFEEICEIMKAYDVTFSLGDGLRPGCI
                     ADANDAAQFGELETLGELTKIAWKHDVQTMIEGPGHVPMQLIKENMDKQLRECGEAPF
                     YTLGPLTTDIAPGYDHITSAIGAAMIGWFGTAMLCYVTPKEHLGLPNRQDVRDGIMAY
                     RIAAHAADLAKGHPGAQVRDNALSKARFEFRWEDQFHLGLDPEKAKEFHDETLPKDAH
                     KLAHFCSMCGPHFCSMKITQDVRDYAEAGMKEKSEQFRAAGAEVYHQG"
     gene            4018..4689
                     /locus_tag="QEL58_003553"
     CDS             4018..4689
                     /locus_tag="QEL58_003553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010483983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two pore domain potassium channel family
                     protein"
                     /protein_id="HDS1677983.1"
                     /translation="MPVAMTTRWLAIARRHPSAWLLGAQLLAVLLYPALDDTAAGRAA
                     LGMFGMAVLGLALWVVQRSPLGTWLALLLAIPSVVFSLAGALLDRSALLTTAQLLESL
                     LYFYTAGALIAYMLQDHKVTRDELFAAGATFTLLAWAFAFAFAVCQQWYPGSFQGTGG
                     GPQRSWMELLYLSFSLLSGVGLSDVVPLHPQARALVMLEQFAGVMYVALVVSRLVGLT
                     MLRRM"
     gene            4949..5302
                     /locus_tag="QEL58_003554"
                     /pseudo
     CDS             4949..5302
                     /locus_tag="QEL58_003554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012481193.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
BASE COUNT         1022 a         1743 c         1759 g          865 t
ORIGIN      
        1 agagccgctt gtgattttga ccttggcctt tgcttgaaaa aagcggtgca gccgcaggct
       61 gcaaaacacc ctcaatccga atcctgcgcg cgtgccgcct ccgcctgcgt ctcttcctgc
      121 gctgccatct cgcgcgcgat ccatgcatcg atcatgtgcc gctggcgctg tgcctgccgc
      181 cgctcgcgcg tgtactcctg gtccagcacc cggtacagcg acaccatcac cagcaccatc
      241 agcagcgcaa atggcaatgc cgcgatcgtg atcatgccct gcagcgcatc caggccgccc
      301 gccagcagca gcgccgctgc gatcaatgcc accgcgatgc cccaggccag cttgcgcttc
      361 aacggcggat cgcccgcttc atcggtggac atgctggcca gcaccagcac cgccgaatcg
      421 gccgatgtca cgaagaagat catcagcagc accagcgcga tgcaggaaag cagcaagggc
      481 agcggcatgc tgtcaaacag ggtgaacagc accgtttcat agccattgcc cagcgcctgc
      541 accagatcgg catggccgaa gatctgcgcc cacagcgcgg tgccgccaaa caccgcgaac
      601 cagaagaagc ccagcaccgt cggtgccagc accacgccga tgacgaactc gcggacgctg
      661 cgcccgcgcg agatgcgcgc gatgaacgag ccgacgaacg gggcccagga aatccaccac
      721 gcccagtaga agatggtcca gtccgccacc caggtgctgc ccgagaacgg cgacatgcgc
      781 aggctcatgg tcaccagctg gttgaggtac gagcccaggg tggtggtgaa cgtatcgaag
      841 atgaatccgg tcgggcccag caccagtacg gtggccgcca gcagcgcggc cagcgcaagg
      901 ttgaagttgg acagccactt cactccgcgc tccacgccac tggcggtgga cgccatgtac
      961 agcacgaacg cgatggcgat gatggtcagc tgcaggggca cgcccgcgtg caggccgaac
     1021 acgcgctcca tgccggcagc gatctggatg gtgccgaagc ccagcgtggt ggccacgcca
     1081 atcgcggtag caacgaccgc tgcaatgttg accacgcgcc cgatccagcc gcgatggtgg
     1141 cggccgatga tcggttgcag catgtcgctg accaggccgc ggccgttgcg gttgaactgg
     1201 aaccaggcca tcgccaggcc gatcagcgcg tagattgccc agggatgcag gccccaatgg
     1261 aagaatgcat agcgcatcga agcccgcgcc gcgtccatgc tctgcggggc caggccttcc
     1321 ggtggcttgg tgaagtggga aatcggctcg gcggcacccc agaacaccag cccgatgccc
     1381 atgcccgcgg cgaacagcat cgacatccag ctggcgcgcg agaactccgg ttcggcatct
     1441 tcaccgccga tgcgcaggtt gccgaaacga ccgaaggcca ggtacatcag gaaggtcagc
     1501 gccaggaaca cgaccagaag atagagccaa ccgacactgc ggatgacatc ggcgagtacc
     1561 gactggacga cggtattgaa cgggccgggc gcgaagccag ccagcagcac caggacgagc
     1621 accagtgcga tggaaatgcg aaacaccatg aaggagcttc tccgatcaag ggattgaggg
     1681 gagcgagcag agcttgcagc gaggggccgg cggcgtgcag cgcgagccgg gcaggggccg
     1741 cgtcggcggc gaaggaagca tcggtcgctg gaatgcgacg gacgtgcacg ttactgaacg
     1801 cgatgtcacg gctctgttag tacagaaaca acgaatccac gcgatgcgcg gctgcaacgg
     1861 tcatgagctg cggtgctttc tatgctctaa tgcgcagcaa gaagcggggg taccgcggcc
     1921 aaacggccac ggttgagaca gtcccttgga acctgatccg gctcataccg gcgtagggaa
     1981 gctttgcaat gttgccatgc ccggactccg cccagggacc gtccgcgcgt ggcggcagtg
     2041 cgccgccgct tcgtccctga ccttcctgga cgatgcccga tgaacgcaca gctctctgcc
     2101 ctgcagcaac aggcccagca actctccgaa tccgtgaccc ggcccattcc cggctcgcgc
     2161 aagatccacg tgcccggctc gcgcccggac ctgcaggtgc cgatgcgcga gatcgcgctg
     2221 acccgcacgc cgacgctgtt cggtggcgaa gagaatgcac cggtcacggt ctacgacacg
     2281 tcgggcccgt ataccgatcc ggaagtgcgc atcgatctgt ccgctggctt gccagcgctg
     2341 cgtcgcggct gggtggaaga gcgtggcgac accgagcagc tcgaaggcct gagttcttcc
     2401 ttcggtcgcg atcgcgagca tgacccgaag ctcgatgcgg tgcgcttccc cgcacgcacc
     2461 ctgccgcgcc gtgcacgtgc cggcgccaac gtcacccaga tgcattacgc acgccgcggc
     2521 atcatcacgc cggaaatgga attcgtcgcc atccgcgaga accagcggct ggatgcgatc
     2581 cgcgatgcag gcctgctgca gcagcacccc ggcgaggcgt tcggtgcgtc gatccagaag
     2641 atcatcacgc cggaattcgt gcgcgacgag atcgcccgcg gccgtgcggt gctgcccaac
     2701 aacatcaacc atccggaaag cgagccgatg atcatcggcc gcaacttcct caccaagatc
     2761 aatgccaaca tcggcaacag cgcggtgtcc tccggcatcg ccgaggaggt ggagaagctg
     2821 gtgtgggcga tccgctgggg cggcgacacg gtgatggacc tgtccaccgg caagcacatc
     2881 cacgaaaccc gcgaatggat catccgcaac tcgccggtgg cgatcggtac cgtgccgatc
     2941 taccaggcgc ttgaaaaggt cgacggccgc gccgaggcgc tgacctggga gatcttccgc
     3001 gacacgctga tcgagcaggc cgaacagggc gtggactact tcaccatcca tgccggcgtg
     3061 ctgctgcgct atgtgccgct caccgccaag cgggtgaccg gcatcgtcag ccgtggcggt
     3121 tcgatcatgg ccaagtggtg cctggcacat cacagggaga acttcctcta cacgcatttc
     3181 gaagagatct gcgagatcat gaaggcctac gacgtgacct tctcgctggg cgacggcctg
     3241 cgcccgggct gcatcgccga tgccaacgat gcagcgcagt tcggcgaact ggaaacgctg
     3301 ggcgagctga cgaagattgc ctggaagcac gacgtgcaga ccatgatcga aggccccggc
     3361 cacgtgccga tgcagctgat caaggagaac atggacaagc agctgcgcga gtgtggcgaa
     3421 gcgccgttct acacgctggg gccgctgacc accgacatcg cacccggcta cgaccacatc
     3481 accagtgcga tcggcgcggc gatgatcggc tggttcggca ccgccatgct ctgctacgtg
     3541 acgccgaagg agcacctggg cctgcccaac cgccaggacg tgcgcgacgg catcatggcc
     3601 taccgcatcg ccgcgcatgc ggccgacctg gccaagggcc acccgggcgc gcaggtgcgc
     3661 gacaacgcgc tgagcaaggc gcgtttcgag ttccgctggg aggaccagtt ccaccttggc
     3721 ctggatccgg agaaggccaa ggagttccat gatgagaccc tgccgaagga cgcgcacaag
     3781 ctggcccact tctgttcgat gtgcggtccg cacttctgct cgatgaagat cacccaggac
     3841 gtgcgcgact acgccgaggc cggcatgaag gagaagtcgg agcaattccg cgccgccggt
     3901 gccgaggtgt accaccaggg gtgatgcgcg aaggggcgtg ccggccagca gccggcacga
     3961 ccgctcatca cgccgcgtcc ggctatcctc cgcccatcgc cccggggaaa ggacgccatg
     4021 cctgttgcca tgaccacccg ctggctggcc attgcccgcc gccatccctc ggcctggctg
     4081 ttgggagcac aactgctggc ggtgctgctg tatcccgcgc tggatgacac cgccgccggc
     4141 cgcgcggcgc tgggcatgtt cgggatggcg gtgcttggcc ttgccctgtg ggtggtgcag
     4201 cgcagtccgc tgggcacctg gctggcgctg ctgctggcga tcccctcggt ggtgttctcg
     4261 ctggccggcg ccctgctgga ccgcagcgcg ctgctgacca cggcgcagct gctggagagc
     4321 ctgctgtact tctacacggc cggtgcgctg atcgcctaca tgctgcagga ccataaagtc
     4381 acccgtgatg agctgtttgc ggccggcgcg actttcacgc tgctggcctg ggcgttcgcg
     4441 tttgcgttcg cggtctgcca gcagtggtac ccgggcagtt tccagggcac gggcgggggg
     4501 ccgcagcgca gctggatgga actgctttat ctgagcttca gcttgttgtc cggggtcgga
     4561 ttgagcgatg tggtgccgct gcatccgcaa gcgcgggcac tggtcatgct ggaacagttc
     4621 gcgggcgtca tgtatgtcgc gctggtggtt tcacgactgg tcggactgac gatgctccgg
     4681 cgcatgtgaa aatgaacgcc agataaaaat ttcgcgccca caggggcgcg aatggtgatg
     4741 cagattatgt gaatgcgtcg gcgagagaga gcctgagtgt cgaccccgtc ataggcgggg
     4801 taaccggctt aggctaatat cggtacgcgt aattgttttt gcggtatgcg ccgatgcttt
     4861 gtgcggaatc tggctttttg ttgtccctgc atggggacgg tatcgctggt gaaacctgcc
     4921 caggcccgtc cctactgtat atcggaaaat gaacagcagc gaaacacagc cgcccgaggc
     4981 cgaccgcatc caggttggcg aatgcgtcgt tactttgtcc tcgcgagagg tcgaagttgc
     5041 gggtgcgcgt cgtccacgcc ggctgacacc gaaggcgctg ggtgtgctgc gcgtgctgct
     5101 gcgccagccc ggccgggtgg tcacccgcga ggagctgttt gccgaagtgt ggcctgacac
     5161 gctgccgacc aacgacgtgt tgacccaggc ggtcacgcag ctgcgcaagg catttgccaa
     5221 cgacgacgac aacggccagg cctatatcga gaccatcgcc aagagcggct accggctgct
     5281 ggttccggtc caggtgctgg aagcgcccga gcctgcgatg gagatcggtg agatcgcgga
     5341 tccgccgctg gcgctggcag gcgccgcagg cgtggttccc gtcggcatc
//
LOCUS       DAOKIP010000240         5377 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.241,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000240 DAOKIP010000000
VERSION     DAOKIP010000240.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 5377)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5377)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5377
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.241"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            187..1191
                     /gene="gap"
                     /locus_tag="QEL58_003555"
     CDS             187..1191
                     /gene="gap"
                     /locus_tag="QEL58_003555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010484083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HDS1677984.1"
                     /translation="MAIKVGINGFGRIGRNVLRSAVLNFGDDIEIVAINDLLEPDYLA
                     YMLKYDSVHGRFKAEVSVQGNDLLVNGKKIRLTQERDPANLKWDEVGADVVLEATGLF
                     LTKETAQKHIDAGAKKVIMSAPSKDDTPMFVYGVNDKTYAGQAIISNASCTTNCLAPL
                     AKVINDKWGIKRGLMTTVHAATATQKTVDGPSNKDWRGGRGILENIIPSSTGAAKAVG
                     VVIPELNKKLTGMSFRVPTSDVSVVDLTVELEKEATYAEICAEVKAQSEGPLKGILGY
                     TEDKVVATDFRGETCTSVFDADAGIALDGTFVKLVTWYDNEWGYSNKCLEMAKVIAAK
                     "
     gene            1317..3986
                     /locus_tag="QEL58_003556"
     CDS             1317..3986
                     /locus_tag="QEL58_003556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2339 domain-containing protein"
                     /protein_id="HDS1677985.1"
                     /translation="MEALIALVVLVLLAIPLLLVVALVMIAGLRRRVAALESAMAAVP
                     AAAKPAVTTPAPERPVVTPAASADPPFLRPVAAAAPQPPEPPVREVAPTEAPAPRPAA
                     PPPVPPVPVQPPLPPEPALPNFIERGIGAVKRWFTEGNVPVKIGMLVLLAGVAALLKY
                     VSDQGWLVLPIELRLAGVTVGALGLLAFGWHQRERRRMFALALQGGAIGVLLLTIFAA
                     FKRFELIPPGFAFASSIALVAGLCVLAVVQNSRTLAVLGILAGFMAPLWLSTGSGNHV
                     GLFSYYAVLNAGIFAIAWFRPWRALNLLGFAFTFGIGTFWGVLQYAPDKFSSTEPFLL
                     LFFAFYLLIPLLYARRQPAGRRDLVDGSLVFGTPLVAFSLQAGMLHEQPMTLALCALG
                     LAAIYAVLAWALIRRASYTVLAQSHAVLAVGFATLAVPLALSARATGAVFALEGAGLA
                     WLGLRQKRWLPQVSGALLQIGAAFAFVAGGDHWHEDLRFLINPTAIGVLLLAVAGFAS
                     AWSYQRRSRHEIALVYYLWGLLWWLGGLVHEITRFFPYRTEVDALLVLVAVTAWLAAE
                     AQRRQPARALGVTALAMLALGFPLALLQSDAHHQPFAGYGALAWALFAVLGVRTLLCL
                     RQGGNTVARIAQFLWWLLWPSLLSLLALWGGGEAGLAQGWTTLLVTLPWLLMAALSLW
                     RWNMLRWPLGEAFDRVRTPLQCVLFGLLSIGWLLGQLLPGDAAPLLWLPVLNPAELAQ
                     WLSLLLLARWLYSDQAPQALLNIRMPLLSLAIFVALTSVVLHGVHQWGGLAWNASMMR
                     FSLAQTSLTVLWSVLGVIAWVWGSRRGQRVLWMVGAVLMGVVLAKLVIVDRQHLGNLL
                     GIASFIAYGLLCTVVGYLAPAPPSAAPSVEEKQ"
     gene            3983..5359
                     /locus_tag="QEL58_003557"
     CDS             3983..5359
                     /locus_tag="QEL58_003557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3999 domain-containing protein"
                     /protein_id="HDS1677986.1"
                     /translation="MRKWSRALLPVMFGMLAAVVAQAADYRSQYAEQWPLTLSSAQSG
                     AYRVVLEPAIYRRAGAADLGDLQVFNAAGQSLPSALLAPDQPLAQPPVQRELPWFALP
                     PLAEAQRNDLQLLTERDTDGRVRRVEARVGGGAVTNGQGGWLIDASVLGQQPVAALVL
                     DWADSGQPLQAQVQLDASDDLQHWRAVGRDIPLVDLQRAGKRLLQRRLQVDGEARYLR
                     VLAQGDARLPTLHSVLAELPPAPATLPWEWLSLEPVTKGKGEYTFELDGRFPVARADV
                     ASADNSLVQWTLFSRDDESAEWQRRSAPWIAYQLQQGAQGQRQQSAAQSLGGVHRDRY
                     WKLVANPAETATAPTLRLGYQPEVLVFLSQGAAPYALAVGSSTARRMEAPIGVLIEEL
                     RQRNDPSWQPTLARLEGSPEPLAGEAALKPQHDWKSWLLWALLGLGVLVVGGLAVSLL
                     RQKPAPSA"
BASE COUNT          759 a         1718 c         1937 g          963 t
ORIGIN      
        1 gatctcgttg ctgggtggat ggggccagtg tcggcctcac gccgcgctaa cgctttgatc
       61 cggatcaaat cctgtccgcc ggccttccgc cggaggcgct ggcccacggt ggccagcccc
      121 ggtttgctag acttatgggc cctatctatc ccgccgcacc tgtcgcggcc gcaggagctt
      181 gagaacatgg caatcaaggt tggtatcaac ggtttcggtc gcatcgggcg caacgtcctg
      241 cgctcggcgg tgctgaactt cggcgacgac atcgaaatcg tggccatcaa cgatctgctg
      301 gagccggact acctggcgta catgctcaag tacgactccg tgcacggccg cttcaaggcc
      361 gaggtgtcgg tgcagggcaa cgacctgctg gtcaacggca agaagatccg cctgacccag
      421 gaacgcgacc cggccaacct gaagtgggac gaagtcggcg ccgacgtggt gctggaagcc
      481 accggcctgt tcctgaccaa ggaaaccgcg cagaagcaca tcgatgccgg cgccaagaag
      541 gtgatcatgt cggccccgtc gaaggacgac acgccgatgt tcgtctacgg cgtcaacgac
      601 aagacctacg ccggccaggc gatcatctcc aacgcctcgt gcaccaccaa ctgcctggcc
      661 ccgctggcca aggtcatcaa cgacaagtgg ggcatcaagc gcggcctgat gaccaccgtg
      721 cacgcggcca ccgctaccca gaagaccgtc gatggcccgt ccaacaagga ctggcgcggc
      781 ggccgtggca tcctggaaaa catcattccg tcgtccaccg gtgcggccaa ggccgtcggc
      841 gtggtcatcc cggaactgaa caagaagctg accggcatga gcttccgcgt cccgacctcg
      901 gacgtgtcgg tggtcgacct gaccgtcgag ctggaaaagg aagccaccta cgccgagatc
      961 tgcgctgaag tgaaggcgca gagcgaaggc ccgctgaagg gcatcctggg ctacaccgaa
     1021 gacaaggtgg tggccaccga tttccgcggc gaaacctgca cctcggtgtt cgacgccgat
     1081 gccggcatcg ccctggacgg caccttcgtc aagctggtga cctggtacga caacgagtgg
     1141 ggctactcga acaagtgcct ggaaatggcc aaggtcatcg ccgccaagta aggccggtgt
     1201 agatcgaaga cggaccccgg cctggccggg gttcgtcgtt tatggggcca gccctgtcgt
     1261 agcatggggc ggtcgaccgc tgccgctggg gcgcgggaac gcaatggaag cacgcaatgg
     1321 aagcactgat agccctggtc gtactggtcc tgctggccat cccgctgctg ctggtagtgg
     1381 cgttggtgat gattgccggc ctgcgccgtc gtgtcgccgc gctggaaagc gcgatggccg
     1441 ctgtgcctgc cgctgccaag ccggccgtca ccacgcccgc gcctgaacgg ccggtggtca
     1501 cgcccgcggc cagtgccgat ccaccgttcc tgcggccggt cgctgcggct gcaccgcaac
     1561 ctccagaacc gccggtgcga gaggtcgcgc ccaccgaggc acctgcgccc cgtcctgctg
     1621 caccaccgcc ggtaccgccg gtgccggtgc agccgccgtt gccgccagaa ccggcgctgc
     1681 cgaatttcat cgagcgcggc atcggtgcgg tcaaacgctg gttcaccgaa ggcaacgtac
     1741 cggtcaagat cggcatgctg gtgctgctgg ccggtgtcgc cgcgctcctg aagtacgtca
     1801 gcgaccaggg ttggctggtg ttgccgatcg aactgcgcct ggctggcgtc accgtcggcg
     1861 cgttggggct gctcgcgttt ggctggcacc agcgcgagcg ccggcggatg ttcgcgctgg
     1921 ccctgcaggg cggcgccatt ggcgtgctgc tgctgaccat cttcgcggcg ttcaagcgat
     1981 tcgagctgat tccgccgggc ttcgccttcg ccagctcgat cgcgctggtg gccgggctgt
     2041 gcgtgctggc agtggtgcag aattcgcgca cgctggcggt gctgggcatc ctcgccggct
     2101 tcatggcgcc gctgtggctg tccaccggca gtggcaacca cgtgggcttg ttcagttact
     2161 acgcggtact caacgcgggc atcttcgcca ttgcctggtt ccgcccgtgg cgcgcgctga
     2221 acctgctggg cttcgccttc acgttcggca tcggtacgtt ctggggcgtg ctgcagtacg
     2281 cgccggacaa gttcagcagc accgaaccgt tcctgctgct gttcttcgcg ttctacctgc
     2341 tgatcccgct gctgtacgcg cgtcgccagc cggccgggcg gcgtgacctg gtcgatggca
     2401 gcctggtgtt cggcacgccg ctggtcgcat tctcgctgca ggcgggcatg ttgcacgagc
     2461 agccgatgac gctggcgctg tgcgcgctgg gcctggccgc gatctatgcg gtgctggcgt
     2521 gggcgctgat caggcgggcg tcgtacaccg tgctggcgca gtcgcatgcg gtgctggcag
     2581 tgggctttgc cacgctggcg gtgccgctgg cgctgtcggc gcgcgccacc ggcgcggtat
     2641 tcgcgctgga aggtgcgggg ctggcatggc tggggctgcg ccagaagcgt tggttgccac
     2701 aggtgtccgg tgcgctgctg cagatcggcg ctgcattcgc cttcgtggcc ggcggcgatc
     2761 attggcacga ggatctgcgc ttcctgatca atcccaccgc catcggcgtg ttgctgctgg
     2821 ccgtggctgg ctttgcatcg gcctggagtt accagcgccg gtcgcgccac gagatcgcac
     2881 tggtctacta cctgtggggc ctgttgtggt ggctgggtgg cctggtgcat gagatcaccc
     2941 gcttcttccc gtaccgcacc gaagtggatg cgctgctggt gctggtggcg gtcacggcat
     3001 ggctggccgc cgaagcacag cgccgccagc cggcccgtgc gctgggcgtg acggcactgg
     3061 cgatgctggc gttgggcttc ccgctggccc tgttgcagag cgatgcccac caccagccgt
     3121 tcgccggcta tggcgcgctg gcctgggcgc tgttcgcggt gctgggcgtg cgcacgttgc
     3181 tgtgcctgcg ccaggggggc aacaccgtgg cacgcatcgc gcagttcctg tggtggctgc
     3241 tgtggccgtc gctgctctcg ctgctggccc tgtggggcgg tggcgaagcg ggtctggcac
     3301 agggctggac gaccctgctg gtcacgctgc cgtggctgct gatggcagcg ctgtcgttgt
     3361 ggcgctggaa catgctgcgc tggccgttgg gtgaagcgtt cgaccgcgta cgcacgccgc
     3421 tgcaatgcgt gctgttcggc ctgctctcga tcggctggct gttgggccag ctgttgccgg
     3481 gcgacgctgc cccgctgctg tggctgccgg tgttgaatcc ggccgagctt gcgcagtggc
     3541 tgagcctgct gctgctggcg cgctggctgt acagcgatca ggcgccgcag gcactgctga
     3601 acatccgcat gccgttgctg tcactggcca tcttcgttgc gctgaccagc gtggtgctgc
     3661 atggcgtgca tcagtggggc ggcctggcgt ggaacgcatc gatgatgcgt ttcagcctgg
     3721 cccagaccag cctgaccgtg ttgtggagcg tgctcggcgt gatcgcctgg gtctggggct
     3781 cgcgccgcgg ccagcgcgtg ttgtggatgg tgggcgccgt gctgatgggg gtggtgctgg
     3841 ccaagctggt catcgtcgat cgccagcacc tgggcaacct gctgggcatc gcatcgttca
     3901 tcgcctacgg cctgctgtgc acggtcgtgg gctatctggc accggctccg ccgagcgcgg
     3961 cgccgtccgt ggaggaaaaa caatgaggaa gtggagcagg gcgctgctgc cggtgatgtt
     4021 cggcatgctg gctgccgtcg tggcgcaggc tgccgattac cgcagccagt acgccgaaca
     4081 gtggccgctg acgctgtcca gcgcacagtc cggtgcatac agggtggtcc tggaaccggc
     4141 aatctatcgc cgtgccggcg ctgccgacct gggcgatctg caggtgttca atgcggcggg
     4201 gcaatcgttg ccctcggcgc tgctggcgcc ggatcagccg ctggcacagc cgccggtgca
     4261 gcgggagctg ccgtggttcg cactgccgcc gttggccgaa gcacagcgca acgatctgca
     4321 gctgctgacc gaacgcgata ccgatggccg cgtacgccgg gtcgaggcgc gcgtcggggg
     4381 cggtgcggtg acgaacgggc agggcggttg gctgatcgac gccagcgtgc tcggccagca
     4441 gccggtggcg gcgctggtgc tggactgggc cgatagtggc cagcccttgc aggcgcaggt
     4501 gcagctggat gccagcgatg atctgcagca ctggcgtgcg gtcgggcgcg acattccgct
     4561 ggtggacctg cagcgcgccg gcaagcgcct gctgcagcgc cgcctgcagg tggacggtga
     4621 ggcacgctac ctgcgcgtgc tcgcacaggg cgatgcacgc ctgccgaccc tgcacagcgt
     4681 gctggctgaa ctgccgcctg ccccggccac gctgccgtgg gaatggttgt cgctggagcc
     4741 ggttacgaag ggcaagggcg aatacacctt cgaactggac ggccgtttcc cggtcgcgcg
     4801 tgcggacgtg gccagcgccg acaacagcct ggtgcagtgg acgttgttca gccgcgatga
     4861 tgagagcgcg gagtggcagc gccgcagtgc gccgtggatc gcctaccagc tgcagcaggg
     4921 cgcgcagggc caacgccagc aatcggcggc ccagtcgctg gggggcgtgc atcgcgaccg
     4981 ctactggaag ctggttgcga atcctgccga aacggccacc gcgcctacgc tgcgcctggg
     5041 ctaccagccg gaggtgctgg tgttcctgag ccagggcgcg gcgccgtatg ccctggccgt
     5101 cggcagttcg accgcgcgcc ggatggaggc gccgatcggt gtgctgatcg aggaactgcg
     5161 ccagcgcaat gatccgtcat ggcagccgac gctggcgcgg ctggagggca gccccgagcc
     5221 gctggccggc gaggcggcgc tgaagccgca gcatgattgg aagtcgtggc tgctgtgggc
     5281 gttgctgggg ctgggtgtgt tggtggtggg tgggctggcg gtcagcctgc ttcggcagaa
     5341 gccggcgcct tcggcgtagg ttccggcgaa cggcgca
//
LOCUS       DAOKIP010000241         5328 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.242,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000241 DAOKIP010000000
VERSION     DAOKIP010000241.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 5328)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5328)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5328
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.242"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..1066)
                     /locus_tag="QEL58_003558"
     CDS             complement(<1..1066)
                     /locus_tag="QEL58_003558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008268458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerophosphodiester phosphodiesterase"
                     /protein_id="HDS1677987.1"
                     /translation="MKSWGCALLLSLAVAPSVAMSAESSTPAAHKVSVYGHRGASALL
                     PEHTLAAYAQAIADGADYIEPDLVMTRDGVMVARHENEIGGTTDVASHPEFASRRTSK
                     VIDGQKVEGWFTEDFTLAELKTLYARERLPELRSTAYDGQFRIASLDEILAFLVQQAG
                     RANRGIGLVPEIKHPTYFQSIGLPMEDKLLAALRGNAYTNVGPVTIQSFETANLRYLR
                     GKIPRDSNIRLLQLLWKGDTQPADIAKAGGRLTYAQMMTPAGLKDIAVYADSIGPELR
                     SIIPLDDKGALGTPTSLVRDAHAVGLMVIPYTFRPENHFQASNLRKGADNARNAEGSI
                     AEMRAYLATGIDAFFTDDPAL"
     gene            complement(1262..2611)
                     /gene="mnmE"
                     /locus_tag="QEL58_003559"
     CDS             complement(1262..2611)
                     /gene="mnmE"
                     /locus_tag="QEL58_003559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019658793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis GTPase MnmE"
                     /protein_id="HDS1677988.1"
                     /translation="MDTTIHTDTIVAIASAPGAGGVGLLRLSGPRAAAIANALGAPAL
                     RPRHAHYARLRDADGEVIDDGIVLWFPAPNSFTGEEVVELQGHGSPVLLQLLVARCIA
                     LGARQARPGEFSERAFLNGKLDLAQAEAIADLIAAGDNRAARAARRSLDGVFSRRIEA
                     VVEQLVLLRIHVEAAIDFADEPLDTLGGAQVRRGLEQARSDLALLRRDAERGRRLRDG
                     LHAVLIGPPNAGKSSLLNALAGSERAIVTDIAGTTRDTLRETIRLDGLELTLVDTAGL
                     RDGGDAIEREGMRRAHVEIERTDLALIVLDARDPTAGEAALGDAVAAVPHKVYIHNKS
                     DLLDVLPALDDPDRVFVSAATGAGLDDLHVRLRSIASAGAGEQVDGEFSARTRHVDAI
                     ERAQEHAQRADGELSHEHLELAAEELRLAHDALGEITGQMSADDLLGRIFSSFCIGK"
     gene            complement(2615..5287)
                     /locus_tag="QEL58_003560"
     CDS             complement(2615..5287)
                     /locus_tag="QEL58_003560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HDS1677989.1"
                     /translation="MPRALSFRLFLPSLLLTLVVAGCGDKDAKAPAAAVTQPSAQAAA
                     AADPAAAPLLAALQKQLDGYRRIIVLLADEEQQSAADRGTSTRVGQQLFHDGLEQRTA
                     IAAQFDTLLRGSSPQRFATLGTVLDYIESAPELFDADRLAFREVLRDLHERVGTDSSL
                     PAVKLHQRIGEDLEALDEIERNYNQELTRIFSRFERTRAIELKREKWDDYIAHLHKDY
                     SREAILRDYGVIEPYPMSMKDSDREIFGRDLPPKTVVLTFDDGPHKAYTDEVVAILKR
                     YDVPGVFFEVGRNLGKVEADGKVSLGPMAKISRSLMEEGYAVGNHSLTHAQLSRTTGD
                     ALRQQVLDTDTLLKDVDSKRAPLFRFPYGARNAEGLQLLNEAGLKSIMWNIDSMDWAD
                     PVPESIVQRVLDQVNKEQRGIILFHDIHDRAVKALPQILDRLIADGYQFAGWNGRDFT
                     VARARKGAASDATVTTGYEKSWAIVVGIDSYAKWPKLEYASHDAQAVADTLTGQFGFP
                     SSQVIVLKNEQATRNNILAAFHDRLADDRTGKNDRVFVFFAGHGATRQLASGRDLGYI
                     IPVDSDPKEFATDAIAMTDIQNIAESMQAKHVMFVMDACYSGLGLTRGGPSSSSFLRE
                     NARRSARQMLTAGGADQQVTDAGPNGHSVFTWVLLQALAGKGDLNGDGLITGTELAAY
                     VAPAVSAVSHQTPAFGSLPGSQGGEFVFQVPDSQEFLNAGTRQLTADAIALNNKVDAA
                     SEAKGSQAPVTVADLQGGKARLVVPSAGPASDRQRAQQANDRGLQLYREKQYDQAAAE
                     FTEALKLRPDFAQAANNLGFVYYRQQRYAEAARWLENTLKIDPSRAVAHLNLGDAYFN
                     AGDKAKARQAYTTYLALQPQGSGAAQARAQLEKL"
BASE COUNT          794 a         1773 c         1827 g          934 t
ORIGIN      
        1 ccagtgccgg gtcgtcggtg aagaaggcat cgatgccggt ggccaggtac gcgcgcatct
       61 cggcgatcga accctcggcg ttgcgtgcat tgtcggcccc cttgcgcagg ttgctggcct
      121 ggaagtggtt ctccgggcgg aaggtgtacg ggatcaccat caggcccacc gcatgtgcgt
      181 cgcgcaccag cgaagtgggc gtgcccagcg cgcccttgtc atccagcgga atgatcgagc
      241 gcagctccgg gccgatgctg tcggcgtaca cggcgatgtc cttcaggccg gccggggtca
      301 tcatctgtgc gtaggtcagc ctgccaccgg ccttggcgat gtcggccggc tgggtgtcgc
      361 ccttccacag cagctgcagc aggcggatgt tgctgtcgcg cgggatcttg ccgcgcaggt
      421 agcgcaggtt ggcagtctcg aacgactgga tggtgaccgg gccgacgttg gtataggcat
      481 tgccgcgcag cgccgccagc agtttgtctt ccatcggcag gccgatcgac tggaagtagg
      541 tcgggtgctt gatctccggc accaggccga tgccacggtt ggcacggccc gcctgctgca
      601 ccaggaaggc caggatctcg tccaggctgg caatgcggaa ctggccatcg taggcggtgc
      661 tgcgcagttc cggcaggcgc tcacgcgcgt acagcgtctt cagctcggcc agggtgaagt
      721 cttcggtgaa ccagccctcg accttctgcc cgtcgatgac cttgctggtg cggcggctgg
      781 cgaactcggg atgcgaggcc acgtcggtgg tgccgccgat ctcgttctcg tggcgggcga
      841 ccatcacccc atccctggtc atcaccaggt ccggttcgat gtagtcggcg ccatcggcaa
      901 tcgcctgcgc ataggcggcc agggtgtgct ccggcagcag cgcgcttgcg cctcggtggc
      961 catagaccga caccttgtgt gcggccgggg tggaggattc agcactcatg gccaccgatg
     1021 gtgccacggc cagcgacaac agcaacgcac aaccccacga cttcactgcg acttccccaa
     1081 gcggtatgtg atgagcgtca gtatgcggcg gcaatgtgac aggcggggga ccccacgcgt
     1141 ccggtagtcg ccgaccttgg tcggcgccct gccggctggc gtcgatgacc ccggatgccc
     1201 tgtgccaacc aaggttggca cccaccagag cgtgagcccg ttcgggaatc tgccccgggc
     1261 cttacttgcc gatgcagaag ctggagaaga tccgccccag caggtcatcg gcactcatct
     1321 gcccggtgat ctcgcccagt gcatcgtggg ccagccgcag ttcctcggcg gccagttcca
     1381 ggtgttcgtg ggacagctca ccgtcggcgc gctgcgcatg ctcctgcgcg cgctcgatcg
     1441 catcgacgtg gcgggtgcgt gcggagaatt cgccgtccac ctgttcgcct gccccggccg
     1501 acgcaatcga acgcaggcgc acatgcaggt catcgagccc ggcaccggtc gcggccgaaa
     1561 cgaacacgcg gtccggatcg tccagcgccg gcagcacatc cagcaggtcc gacttgttgt
     1621 ggatgtagac cttgtgcggc accgcggcca cggcgtcacc cagcgcggct tcaccggcgg
     1681 tggggtcccg cgcatccagc actatcaatg cgaggtcggt gcgctcgatt tccacatggg
     1741 cgcgacgcat gccctcgcgc tcgatggcat cgccaccgtc gcgcaggccg gcggtgtcga
     1801 ccagggtcag ttccaggcca tccaggcgga tcgtctcgcg cagggtgtcg cgggtggtac
     1861 cggcgatgtc ggtgacgatc gctcgctcgc tgccagccag cgcattgagc aatgaactct
     1921 tgccggcatt cggtggcccg atcagcaccg cgtgcaggcc atcgcgcagg cgacggccgc
     1981 gttcggcgtc gcggcgcaac agggccagat cgctgcgcgc ctgttccagc ccgcgccgca
     2041 cctgcgcgcc accgagcgta tccagcggtt cgtcggcgaa gtcgatggcc gcttccacgt
     2101 ggatgcgcag cagcaccagc tgttcgacca ccgcctcgat gcggcgcgag aacacgccat
     2161 ccagtgaacg tcgtgcagcg cgcgcggcac ggttgtcacc ggcggcgatc aggtcggcga
     2221 tggcctcagc ctgggccagg tcgagcttgc cgttgaggaa ggcccgttcg ctgaactcac
     2281 ccggccgcgc ctggcgcgca cccagcgcga tgcagcgcgc gaccagcagc tgcaacagca
     2341 ccgggctgcc gtgtccctgc agttccacca cttcttcgcc ggtaaagctg ttcggcgccg
     2401 ggaaccacag cacgatgcca tcgtcgatca cctcaccgtc ggcgtcgcgc aggcgcgcgt
     2461 aatgcgcatg gcgcgggcgc agtgcaggcg cacccagtgc gttggcgatg gccgccgcgc
     2521 gcgggccgga caggcgcagc aggccgacgc ccccggcacc gggagcgctg gcgatggcta
     2581 cgatggtgtc cgtgtggatc gtggtgtcca tggctcagag cttctccagc tgcgcgcgcg
     2641 cctgcgcggc gccgctgccc tgcggctgca gcgccaggta ggtggtatag gcctgcctgg
     2701 ccttggcttt gtcgcctgcg ttgaagtagg catcgcccag gttgagatgg gccaccgcgc
     2761 gcgacgggtc gatcttcagc gtgttctcca gccagcgcgc cgcttccgca tagcgctgct
     2821 gacggtagta gacgaagccg aggttgttcg ccgcctgcgc gaagtccggg cgcagcttca
     2881 gtgcttcggt gaactcggca gcggcttggt cgtactgctt ctcgcgatac agctgcaggc
     2941 cacggtcatt ggcctgctgc gcgcgctggc ggtccgaggc cgggccggca ctgggcacca
     3001 ccagcctggc cttgccgccc tgcaggtcgg ccacggtcac cggcgcctgg ctgcccttgg
     3061 cttcgctggc cgcatcgacc ttgttgttca acgcgatcgc atcggcggtc agctggcgcg
     3121 taccggcgtt gaggaactcc tggctgtccg gcacctggaa tacgaactcg ccgccctgcg
     3181 aaccgggcag gctgccgaag gccggggtct ggtgcgaaac cgccgaaacc gccggcgcca
     3241 cgtacgcggc cagctcggta ccggtgatca ggccatcacc gttgaggtca cccttgccgg
     3301 ccagcgcctg cagcagcacc caggtgaaca ccgaatggcc gttcgggccg gcatcggtca
     3361 cctgctggtc ggcaccgccg gcggtcagca tctgccgcgc gctgcggcgt gcgttctcgc
     3421 gcaggaacga cgacgacgac gggccacctc gggtcaggcc caggccgctg tagcaggcat
     3481 ccatcacgaa catcacgtgc ttggcctgca tgctctcggc gatgttctgg atgtcggtca
     3541 tcgcgatcgc gtcggtggcg aactctttcg ggtccgaatc caccgggatg atgtagccaa
     3601 ggtcgcgccc ggaggcgagc tggcgggtcg caccatggcc ggcgaagaac acgaacacgc
     3661 ggtcgttctt tccggtgcgg tcgtccgcca ggcggtcgtg gaaggcggcc aggatgttgt
     3721 tgcgggtggc ctgctcgttc ttcagcacga tcacctgcga agaggggaag ccgaactgcc
     3781 ctgtcagcgt gtcggccacc gcctgcgcat cgtggctggc gtactccagc ttcggccact
     3841 tggcgtaact gtcgatgccg accacgatcg cccacgactt ctcgtagccg gtggtgacgg
     3901 tggcatcact ggccgcgccc ttgcgcgcgc gagcgacggt gaagtcgcgg ccgttccagc
     3961 cggcgaactg gtagccgtcg gcgatcaggc ggtcgaggat ctgcggcagc gccttcaccg
     4021 cacggtcgtg gatgtcgtgg aacaggatga tgccgcgctg ttccttgttc acctggtcga
     4081 gcacgcgctg cacgatcgac tccggcacgg gatcggccca gtccatcgag tcgatgttcc
     4141 acatgatcga cttcagccct gcctcgttga gcagctgcag gccttcggcg ttgcgtgcac
     4201 cgtaggggaa gcggaacagg ggcgcgcgct tgctgtcgac gtccttcagc agcgtatcgg
     4261 tgtccagtac ctgctggcgc agcgcgtcgc cggtggtgcg cgacagctgg gcgtgggtca
     4321 ggctgtggtt gccgaccgca tagccctctt ccatcaggct gcggctgatc ttcgccatcg
     4381 gcccgaggct gaccttgccg tccgcctcga ccttgcccag gttgcggccc acctcgaaga
     4441 acacacccgg cacgtcgtag cgcttgagga tggccaccac ttcatcggtg taggccttgt
     4501 gcgggccgtc gtcgaaggtc agcaccacgg tcttcggcgg caggtcgcgg ccgaagatct
     4561 cccggtcgct gtccttcatc gacatcgggt acggctcgat caccccgtag tcgcgcagga
     4621 tcgcttcgcg gctgtagtcc ttgtgcaggt gggcgatgta gtcgtcccac ttctcgcgct
     4681 tcagttcgat ggcacgggtg cgctcgaagc ggctgaagat ccgggtcagt tcctggttgt
     4741 agttgcgctc gatttcatcg agtgcttcca ggtcttcgcc gatgcgctgg tgcagtttca
     4801 ccgccggcag cgacgaatcg gtaccgaccc gttcgtgcag atcacgcagc acttcgcgga
     4861 acgccaggcg gtcggcatcg aacagttccg gtgccgattc gatgtagtcc agaacggtac
     4921 cgagggtggc gaagcgctgc gggctggaac cgcgcaacag ggtgtcgaac tgcgcggcga
     4981 tggccgtgcg ctgttccagc ccatcgtgga acagctgctg ccccacacgc gtggaggtac
     5041 cgcggtctgc ggccgactgc tgttcctcgt cggccagcag cacgatgatc cggcggtagc
     5101 cgtcgagctg cttctgcagc gcggccagca gcggtgcggc ggccggatca gcggcggccg
     5161 cggcctgcgc gctgggctgg gtgacggcgg ccgccggtgc cttcgcatcc ttgtcgccac
     5221 acccggccac gaccagggtc aacaacagcg agggcaggaa caggcggaac gacagcgcac
     5281 gcggcatggt ggactcgaag gtgggaggaa cggtgtgccg ggaattct
//
LOCUS       DAOKIP010000242         5291 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.243,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000242 DAOKIP010000000
VERSION     DAOKIP010000242.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 5291)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5291)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5291
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.243"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(90..1898)
                     /gene="lpdA"
                     /locus_tag="QEL58_003561"
     CDS             complement(90..1898)
                     /gene="lpdA"
                     /locus_tag="QEL58_003561"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017114723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HDS1677990.1"
                     /translation="MATIEVKVPDIGDYSDVPVIEVLVAVGDTVKKDQGLVTLESDKA
                     TLEVPSSAAGVVKELKVKLGDSLSEGAVVVVLETEGAAEAPAKAAAPAPAAAAPASKP
                     PVTPSHRAPAEPAAPKPALSSGKPADIECEMVVLGSGPGGYTAAFRAADVGLDTVLVE
                     RYASLGGVCLNVGCIPSKALLHAAAVIDEVAHAGDFGVEFGKPTITLDKLRQYKEKVV
                     NQLTKGLAGMAKQRKVRSVQGVGRFVSANELEITAADGSTQLLRFQKCIIAAGSQAVK
                     LPNFPWDDTRVMDSTDALELAEVPGSLLVVGGGIIGLEMATVYGALGSKVTVVEFMDQ
                     LMPGADKDLVKPLADRLKKQGIEVHLKTKASGVTADAKGITVSFEAAEEGQSPALAQG
                     TFDRVLVAVGRSPNGRKIDAEKAGVQVTERGFIPVDRQMRTNVPHIFAIGDIVGNPML
                     AHKATHEGKLAAEVAAGHKKEWVARVIPSVAYTNPEIAWVGVTETEAKAKGLKVGVAK
                     FPWAASGRAIGIGRTEGFTKLIFDEETHRIIGGAIVGVHAGDLLAEIGLAIEMGAEAE
                     DIGHTIHAHPTLSESVAMASEIYDGTITDLYMPKKK"
     gene            complement(2006..3718)
                     /gene="aceF"
                     /locus_tag="QEL58_003562"
     CDS             complement(2006..3718)
                     /gene="aceF"
                     /locus_tag="QEL58_003562"
                     /EC_number="2.3.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007974307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyllysine-residue acetyltransferase"
                     /protein_id="HDS1677991.1"
                     /translation="MAEIKEALVPDIGDYSDIPVIEVLVAVGDTVKKDQGLVTLESDK
                     ATMEVPSSVAGVVKELKVKVGDNLSEGKVVALIEVAEGEAAKPAAAAPAPAKAAAPAA
                     ATQSAPAPAAAAPAAPAASGGAVEALVPDIGDYTDIPVIEVLVAVGDKVKKDQGLVTL
                     ESDKATMEVPSSVAGVVKELKVKVGDNLSQGAVVAIIEAEGAAAPAPSKAAAAAAPAA
                     AETATKVEPVAVPAQPDKLAAREVASVGTPSSPPVQFNADGVLPAKVPYATPAVRVFA
                     RELGVDLLQINGTEKGGRITKGDVQKFVKAALSGGVPAAAGGAVAAGGGLNLLPWPKV
                     DFSKFGETEVQPLSRIKKISGANLARNWAMIPHVTQFEQADITELEGLRVALNKENEK
                     AGIKLTMLAFLIKASAAALKKFPEFNASLDASGENLTLKKYFHIGFAADTPNGLVVPV
                     IRDVDKKGVVQIAQETGELAKKARDGKLGPADMSGGCFSISSLGGIGGTAFTPIVNAP
                     EVAILGVSKSSIQPVWNGKEFAPKLMLPLSLSYDHRVIDGALAARFTTYLSQVLADMR
                     RVLL"
     gene            complement(3832..4401)
                     /locus_tag="QEL58_003563"
     CDS             complement(3832..4401)
                     /locus_tag="QEL58_003563"
                     /EC_number="3.2.2.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005411139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-deoxyinosine glycosylase"
                     /protein_id="HDS1677992.1"
                     /translation="MSAATMCIGLQAQVNVDCRVLLLGSMPGVASLQEQRYYAHPRNR
                     FWPLLAEICGFDAGLPYAQRLQALNAAGIGLWDVIGQCERRGSLDADIVRGTEVPNAL
                     PSLIASLPELELIACNGAASMQAFQRWVLPRLEAPPRLLALPSTSPANAAWSLPRLRL
                     AWQPVADVLATSSGHRRDNTLPTGQGRNP"
     gene            4588..5220
                     /locus_tag="QEL58_003564"
     CDS             4588..5220
                     /locus_tag="QEL58_003564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007974312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HDS1677993.1"
                     /translation="MRSIRILSLALLTSAAFAPAAFAQDSSTDTASGKHFAVVGGISL
                     LQPKNDPIDGIKKTDGGPAPTVSFSYYVNDNWAVELWGAADKFDNKFKGPNNVRVGSV
                     EQQPVALSGQYHFGQADNVFRPFVGVGYYQSSFSSEKLADGSSSDIRLKDAKGVIGTV
                     GVDMNINSTWFARADARYMRARPDVKVGGEKIGEAKMDPWTVGFGIGARF"
BASE COUNT          831 a         1795 c         1724 g          941 t
ORIGIN      
        1 cctcgcgatg tgcagccgaa gacgccccgc agccaacgaa aaagccccgg cagaagccag
       61 ggcttttcgt tcggaacggc gcgggcgcct tacttcttct tcggcatgta cagatcggtg
      121 atcgtgccgt cgtagatttc cgaggccatc gccaccgatt cgctcagcgt cgggtgcgcg
      181 tggatggtgt ggccgatgtc ttcggcttcg gcacccatct cgatggccag gccgatctcg
      241 gccagcaggt caccggcatg cacgccgacg atggcaccac cgatgatgcg gtgggtctct
      301 tcgtcgaaga tcagcttggt gaagccctcg gtgcggccga tgccgatcgc gcggccgctg
      361 gccgcccacg ggaacttggc cacgccgacc ttcaggccct tggccttggc ctcggtctcg
      421 gtgacgccaa cccaggcgat ttccgggttg gtgtaggcca ccgacggaat cacgcgggcg
      481 acccattcct tcttgtggcc ggcagccact tcagcggcca gcttgccttc atgcgtggcc
      541 ttgtgggcca gcatcgggtt gccgacgatg tcgccgatgg caaagatgtg cggcacgttg
      601 gtgcgcatct gccggtccac cgggatgaag ccacgctcgg tgacctgcac gccggccttc
      661 tcggcatcga tcttcctgcc gttcggcgag cggcccacgg ccaccagtac gcggtcaaag
      721 gtgccctgcg ccagcgcggg cgactggcct tcctcggcgg cttcgaagga cacggtgatg
      781 cccttggcat cggcggtgac gcccgaggcc ttggtcttca ggtgcacttc gatgccctgc
      841 ttcttcaggc ggtcggccag cggcttgacc aggtccttgt cggcacccgg catcagctgg
      901 tccatgaact cgaccacggt gaccttgctg cccagcgcgc catacacggt ggccatttcc
      961 aggccgatga tgccgccacc gacgaccagc agcgagcccg gcacttcggc cagctccagc
     1021 gcatcggtgg agtccatcac gcgcgtgtcg tcccagggga agttcggcag cttcaccgcc
     1081 tgcgaaccgg cggcgatgat gcacttctgg aagcgcagca gctgggtgct gccgtcagcg
     1141 gcggtgatct ccagctcgtt ggccgagacg aacctgccga cgccctgcac gctgcggacc
     1201 ttgcgctgct tggccatgcc ggccaggccc ttggtcagct ggttgacgac cttttccttg
     1261 tactggcgca gcttgtccag ggtgatggtc ggcttgccga actcgacgcc gaaatcaccg
     1321 gcgtgggcca cttcgtcgat caccgctgcg gcatgcagca gcgccttgga cggaatgcag
     1381 ccgacgttga ggcagacgcc gccgaggctg gcgtagcgct cgaccagaac ggtatccagg
     1441 ccgacgtcgg cggcgcggaa ggcggcggtg tagccgcccg ggcccgagcc cagcacgacc
     1501 atttcgcatt cgatatcggc cggcttgccg ctggacagcg ccggcttcgg cgcagccggc
     1561 tcggccgggg cgcggtgcga cggggtcacc ggcggcttgc tggccggcgc agctgcggcc
     1621 ggagccggcg cggcggcctt ggccggggct tcggcggcgc cttcggtttc cagcaccacg
     1681 accacggcgc cttcggacag gctgtcgccc agcttgacct tcagttcctt gaccacaccg
     1741 gcggccgagg acggcacttc cagggtggcc ttgtccgatt ccagggtcac cagaccctga
     1801 tccttcttca ccgtgtcgcc gacggcgacc aacacttcga tcaccggcac atcgctgtaa
     1861 tcgccgatgt cgggaacctt gacttcaatc gtggccatgg tggttttcct cgtgcccggc
     1921 cggcgtggcc ggcgggctgt cactgcatct gttcacgcgg ccgcgccaag gggcagcggc
     1981 cacacggtgg gggcgaagcg gtgccttaca gcagcacgcg gcgcatgtcg gccagtacct
     2041 gcgacaggta ggtggtgaag cgtgcggcca gggcgccatc gatgacgcgg tggtcgtagc
     2101 tcagcgacag cggcagcatc agcttcggcg cgaattcctt gccattccac accggctgga
     2161 tggaggactt ggagacgccg aggatggcca cttccggtgc attgacgatc ggggtgaacg
     2221 cggtgccgcc gatgccgccc agcgagctga tcgagaagca gccgccgctc atgtcggccg
     2281 ggcccagctt gccgtcgcgc gccttcttgg ccagttcgcc ggtttcctgc gcgatctgca
     2341 ccacgccctt cttgtccacg tcgcggatga ccggcacgac caggccgttc ggcgtgtcgg
     2401 cggcgaaacc gatgtggaag tacttcttca gggtcaggtt ttcaccgctg gcatcgagcg
     2461 aggcgttgaa ttccgggaac ttcttcagcg ccgcggcact ggccttgatc aggaaggcga
     2521 gcatggtcag cttgatgccg gccttctcgt tctccttgtt cagcgccacg cgcaggcctt
     2581 ccagctcggt gatgtcggcc tgctcgaact gggtgacgtg cgggatcatc gcccagttgc
     2641 gggccaggtt cgcgccggag atcttcttga tgcgcgacag cggctgcact tcggtctcgc
     2701 cgaacttgct gaagtcgacc ttcggccacg gcagcaggtt caggccacca ccggcggcaa
     2761 cggcaccacc ggcagcggcc ggcacgccgc cgctgagcgc ggccttgacg aacttctgca
     2821 cgtcaccctt ggtgatgcgg ccgccctttt cggtgccgtt gatctgcagc aggtccacgc
     2881 ccagctcgcg ggcgaacacg cgcaccgccg gggtggcgta cggcaccttg gccggcagca
     2941 cgccatcggc attgaactgc accggcgggc tggacggggt accgaccgag gcgacctcgc
     3001 gggcggccag cttgtccggc tgggccggca cggcgaccgg ctcgaccttg gtggcggttt
     3061 cggcggcggc cggggcagcg gcagcggcgg ccttgctcgg ggccggcgcg gcagcgccct
     3121 cggcctcgat gatggcgacc acggcaccct gcgacagatt gtcgccgacc ttgaccttca
     3181 gctccttgac cacgccagcg accgacgacg gcacttccat ggtggccttg tcgctttcca
     3241 gcgtgaccag gccctggtcc ttcttgacct tgtcgccgac ggcgaccagc acttcgatga
     3301 ccgggatgtc ggtgtaatcg ccgatgtccg gcaccagcgc ttcaacggca ccgccgctgg
     3361 cggccggggc ggccggggca gcagcggccg gggccggcgc gctctgggtg gcggcggccg
     3421 gggcagcagc cttggccggt gccggtgcgg cggcggccgg cttggcagct tcgccttcgg
     3481 ccacttcgat cagcgccacg accttgcctt cggacaggtt gtcgccgacc ttgaccttga
     3541 gttccttgac cacgcccgcc accgaggacg gcacttccat ggtcgccttg tcgctttcca
     3601 gcgtcaccag gccctggtcc ttcttgaccg tgtcgccgac ggcgacaagc acctcgatta
     3661 ccgggatatc gctgtagtca ccgatatcgg ggacaagtgc ttccttgatt tcggccatgg
     3721 ggataactcc ggcaatctgg tgtagggaaa cgtctattgt gcggccagcg gggtccagcg
     3781 ccaaccgtta caggtgtttt cagtacgcac gcagccggga cacgctgttg ctcatgggtt
     3841 gcggccttga ccagtcggta gcgtattgtc ccgacgatgt ccgcttgatg tcgccagtac
     3901 gtcggccacc ggctgccagg ccaggcgcag gcgcggcagc gaccacgccg cgttggccgg
     3961 gctggtggag ggcagcgcca gcagcctcgg cggcgcctcc agccggggca gcacccagcg
     4021 ctggaacgcc tgcatcgatg ccgcgccatt gcaggcgatc agctccagct caggaagcga
     4081 ggcgatcagt gacggcagcg cattgggcac ttccgtgccg cgcacgatgt ccgcgtccag
     4141 actgccgcgc cgctcgcact ggccgatcac atcccacagg ccgatgcccg cggcgttcaa
     4201 tgcctgcaat cgctgtgcat acggcaggcc cgcatcaaac ccgcagattt ccgccaaaag
     4261 cggccagaag cgattgcgcg ggtgcgcgta gtagcgctgc tcctgcaacg acgccacacc
     4321 cggcatcgaa cccagcagca gcactctgca atccacgttc acctgcgctt gcaggccgat
     4381 gcacatcgtc gcggcgctca catcttctcc aactgaatga atgtcacgga tggccaaaaa
     4441 ccccatgaat acaggctttt cgtgctattc gctgaacaag ccaaaccaat ttttaacgcg
     4501 cgtcggattc gattcatgtt ggggcgacta cggtgtgctc gccccgcaac cgggggccca
     4561 aaacaagaaa cattaggaga tacccccatg cgctccatcc gtatcctgag tctcgccctg
     4621 ctgacctccg ccgcgttcgc gccggccgct ttcgcccagg acagcagcac cgataccgct
     4681 tcgggcaagc attttgccgt tgttggcggc atctcgctgc tgcagccgaa gaatgatccg
     4741 atcgacggca tcaagaagac cgatggcggc ccggcgccga ccgtcagctt cagctactac
     4801 gtcaacgaca actgggccgt tgaactgtgg ggcgccgccg acaagttcga caacaagttc
     4861 aagggcccga acaacgttcg cgtgggctcg gtcgagcagc agccggtcgc gctgagcggc
     4921 cagtaccact tcggccaggc cgacaacgtg ttccgtccgt tcgtgggcgt gggctactac
     4981 cagtcgagct tcagcagcga aaagctggcc gacggcagca gctccgacat ccgcctgaag
     5041 gacgccaagg gcgtgatcgg caccgtcggc gtggacatga acatcaattc cacctggttc
     5101 gcccgtgctg acgcccgcta catgcgcgcc cgcccggacg tgaaggttgg cggcgagaag
     5161 atcggcgaag ccaagatgga tccgtggacc gtcggcttcg gcatcggcgc ccgcttctga
     5221 tccaggcagc accgctccat tgatgcaacg cgacgggccc ttcggggccc gtcgtcgttt
     5281 ccgtcacctg c
//
LOCUS       DAOKIP010000243         5255 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.244,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000243 DAOKIP010000000
VERSION     DAOKIP010000243.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 5255)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5255)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5255
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.244"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(88..633)
                     /locus_tag="QEL58_003565"
     CDS             complement(88..633)
                     /locus_tag="QEL58_003565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="WG repeat-containing protein"
                     /protein_id="HDS1677994.1"
                     /translation="MIARQARPAPASGRLARSLVLLGMLASSTALAQAPACKLLTDEH
                     GLWPLPDCEVVDHRPRIHPDTLKDLNFDDHGLAVVYADQGFHYVNRKGRSLPVLTWDN
                     GPETPQEGLLRARVGNRVGYFDLKFRQVVPGTFDFGWPFRDGVAEVCNGCRRGTPDAD
                     GHTPMEGGERFRIDRSGRRVK"
     gene            complement(630..2336)
                     /locus_tag="QEL58_003566"
     CDS             complement(630..2336)
                     /locus_tag="QEL58_003566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase"
                     /protein_id="HDS1677995.1"
                     /translation="MRRSVSLLAACATTLLLGACASTAPASAPAGLKVAVDPVAHPAG
                     ETPQWWYRSGASQAAANGAMSGKAKNVILFLGDGMSLTTVAASRIYEGQQKGGSGEEN
                     LLSWERFPATAFSKTYNTDSQTPDSAGTMTAITTGVKTHMGAIGVSAGSRTDCADSLS
                     KGLLTWLQLADSAGLATGVVSTARLTHATPAATYANSPERNWENDTDLTEAAKAAGCK
                     DIAQQLLSTSRYGRGPLVALGGGRGEFTTVEERDPEYDDKVGQRLDGRSLVQEWQQAH
                     PQGAYVWNSKQLAASANAPAILGLFEPDHMRYEYERPQDPGGEPSLAELTAAAIKNLA
                     KHQEGYVLMIEGARIDHANHSGNAYRALTETVALSDAVRVANELTSADDTLIIVTADH
                     SHTLNFVGYPARGNPILGKVKDKGGEDGAGKLDYALDGSGQPYTTLTYANGPGHTGAS
                     NQQPAGAKRYPHNPSSFEPANGRPNLREVDTEHPDYMQEALVPMKSESHGGEDVGIWA
                     RGPGSKAIRGTLEQNAIYHMIVQATPALRERLCQAGTCDDKGVPVQLPAPTAFERKAE
                     AK"
     gene            2490..3824
                     /locus_tag="QEL58_003567"
     CDS             2490..3824
                     /locus_tag="QEL58_003567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dicarboxylate/amino acid:cation symporter"
                     /protein_id="HDS1677996.1"
                     /translation="MKLVSAWLRIPFWQRVVGGFVLGALAGWALGPAAETWFGPLGEL
                     YVTLIKMIAVPLVFFAVINAISSLHGQKSVAALSGRTFLWFVITAALAVCVGLGVGTV
                     LQPGAGGLQLSMASNYVPREVPSVVQVLLDVVPANVFYALSGIGTKVNAAGETVLAAG
                     RGSILPVIFFAGLVGFAIVKLGEKVTEARKLVGQMSDIMIQVTRFVLEVTPIGTFGLI
                     AGLVGSYGFEKLLPLGHFVLALYVACALHIVVVYSALLLAHGLNPLKFFRGAAPGMQV
                     AFVSSSSFAAMPVALRSITHNLGVNKDYGSFAVPLGASIKMDGCGAIYPALCAVFIAQ
                     YSGVPLTPEQYVVVLIASVLGSFGTAGVPGTAVIMATVVLSAANLPLETIGYLYAIDR
                     ILDMMRTMTNVTGQMLVPVIVAKETGLLDQAVYDNPSGNVGVDDPDPTPPRS"
     gene            complement(4023..4796)
                     /locus_tag="QEL58_003568"
     CDS             complement(4023..4796)
                     /locus_tag="QEL58_003568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HDS1677997.1"
                     /translation="MTTDDLKSEGQTSVSSRGARPLLLGLALCLTSLPAWSQTAPNRS
                     DVTPAPVAESPARPAAKAEAAAPQRSRVDAAASATLAALLPHLAANDTIPLMDRSAVV
                     AGDLSRLLANYDTSSAANGSVVGTAADNGKVQSLLRRAMTLLGTPYRWGGSNPDSGFD
                     CSGLVGYVFRSALGIELPRVSREMAHDDNAELINDRTALAAGDLVFFGRKGRVDHVGI
                     YVGDGRFLHAPSSGKDVRVDTLLSGYWGNKFMQARRVDL"
     gene            complement(4928..>5255)
                     /locus_tag="QEL58_003569"
     CDS             complement(4928..>5255)
                     /locus_tag="QEL58_003569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014038010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HDS1677998.1"
                     /translation="YRYGGNTPDSGFDCSGLVAYVYREMLDLKLPRTSRDLAAVQGPK
                     IDPQRLATGDLVFFGSRGNVTHVGIYVGEGRFVHAPSTGGTVRLDSLSGPYWKDHYTG
                     AKRVLR"
BASE COUNT          757 a         1674 c         1870 g          954 t
ORIGIN      
        1 acccacagaa aaccagagcc gctttggctg ttgctgttgc tgttgctctg gcctgcagca
       61 ggtgcagggc gcagccctgc cgaaccccta cttcacccgg cggcccgaac ggtcgatgcg
      121 gaaccgctct ccgccttcca tcggcgtgtg cccatccgca tccggcgtgc cgcgacggca
      181 gccgttgcag acctctgcca cgccatcgcg gaacggccag ccgaaatcaa aggtgcccgg
      241 caccacctgg cggaacttca gatcgaagta gcccacgcgg ttgccgacgc gggcccgcag
      301 caggccctcc tgcggtgtct ccgggccgtt gtcccaggtc agcaccggca ggctgcggcc
      361 cttgcggttg acgtaatgga aaccctggtc ggcatacacc acggccaggc cgtggtcgtc
      421 gaagttcagg tctttcagcg tgtcggggtg gatcctgggc cggtgatcga ccacctcgca
      481 gtcgggcagc ggccacaacc cgtgctcgtc ggtgagcagc ttgcaggccg gtgcctgtgc
      541 cagcgcagtg ctgctggcca gcatgccgag caggaccagc gaccgcgcga ggcggccgct
      601 ggcgggggca gggcgggcct gccgcgcgat cacttggcct cggccttgcg ctcgaaggcg
      661 gtcggcgccg gcagctgcac cggcacgccc ttgtcgtcgc aggtgccggc ctggcacagg
      721 cgttcgcgca gggccggggt ggcctgcacg atcatgtggt agatcgcgtt ctgttccagc
      781 gtgccgcgga tcgccttgct gcccgggcct cgggcccaga tgccgacgtc ctcgccaccg
      841 tgcgattcgg acttcatcgg caccagcgct tcctgcatgt agtccgggtg ctcggtgtcg
      901 acctcacgca ggttcgggcg gccattggcc ggttcgaagc tgctcgggtt gtgcgggtag
      961 cgcttggcgc cggccggctg ctggttgctg gcgccggtgt ggcccgggcc gttggcgtag
     1021 gtcagggtgg tgtacggctg gccgctgccg tccagcgcat agtccagctt gccggcaccg
     1081 tcttcgccgc ccttgtcctt caccttgccc aggatcgggt tgccgcgtgc cgggtagccg
     1141 acgaagttca gggtgtggga gtggtcggcg gtgacgatga tcagggtgtc gtcggccgag
     1201 gtcagttcat tggccacgcg caccgcatcg gacagggcga cggtctcggt cagggcgcgg
     1261 taggcgttgc cgctgtgatt ggcgtggtcg atgcgcgcgc cctcgatcat cagcacgtag
     1321 ccttcctggt gcttggccag gttcttgatc gccgcggcgg tcagttcggc caggctcggc
     1381 tcgccgcccg gatcctgcgg gcgctcatac tcgtagcgca tgtggtccgg ctcgaacagg
     1441 ccgaggatgg ccggcgcgtt ggcggaggcg gccagctgct tgctgttcca gacgtaggca
     1501 ccctgcgggt gcgcctgctg ccattcctgc accaggctgc ggccgtccag gcgctggccg
     1561 accttgtcgt catactccgg gtcgcgctct tccacggtgg tgaattcacc gcgaccgccg
     1621 ccgagggcga ccagcgggcc acggccatag cgcgaggtcg acagcagctg ctgggcgatg
     1681 tccttgcagc cggccgcctt ggccgcttcg gtcaggtcgg tgtcgttttc ccaattgcgc
     1741 tcgggcgagt tcgcgtaggt ggcggcgggg gtggcgtggg tcaggcgtgc ggtggacacc
     1801 acgccggtgg ccaggccggc actgtcggcc agctgcagcc aggtcagcag gcccttggat
     1861 aggctgtcgg cacagtcggt gcggctgccg gcgctgacgc cgatcgcacc catgtgggtc
     1921 ttcacgccgg tggtgatggc ggtcatggtg ccggccgaat ccggcgtctg cgaatcggtg
     1981 ttgtaggtct tgctgaacgc cgtggccggg aagcgctccc aggacagcag gttctcttcg
     2041 cccgaaccgc ccttctgctg gccctcgtag atgcgcgagg cggccacggt ggtcaggctc
     2101 atgccgtcgc ccaggaacag gatgacgttc ttggccttgc cggacatcgc gccgttggcg
     2161 gctgcctggg aggcgccgct gcggtaccac cactgcgggg tctcaccggc cgggtgggcg
     2221 acgggatcga cggcgacctt caggccggcc ggggcggacg cgggggcagt gctggcgcag
     2281 gcgcccagca gcagggtggt ggcgcaggcg gccaacaggg agacggaacg gcgcatggac
     2341 gctgggatct cacaaactgt aacgggacgt tcattatgcc cggccccgca aggcacgccg
     2401 atgacacact gatttgccgg ccgggcggtc gttctgccgg ccgccttggg ctatcgttcc
     2461 agcatccctt cttcccctct ggattgccta tgaagctggt ctctgcctgg ctgcggattc
     2521 cattctggca gcgcgtggtc ggtggcttcg tgctcggcgc gctcgccggc tgggcgctgg
     2581 gcccggccgc agaaacgtgg ttcggcccgc tcggcgagct gtacgtcacc ctgatcaaga
     2641 tgatcgcggt accgctggtg ttcttcgcgg tcatcaatgc gatctcgtca ctgcacggcc
     2701 agaagtcggt tgccgcgctc agtggccgca ctttcctttg gttcgtgatc accgccgcgc
     2761 tggcggtgtg cgtcggcctg ggcgtgggta ccgtgctgca gcccggcgcc ggtggcctgc
     2821 agctgtcgat ggccagcaac tatgtgccgc gcgaagtgcc cagcgtggtg caggtgctgc
     2881 tggacgtggt gccggccaat gtcttctatg cgctgtccgg catcggcacc aaggtcaatg
     2941 cggccggtga aaccgtgctg gccgccggtc gcggttcgat cctgccggtg atcttcttcg
     3001 cgggcctggt gggctttgcc atcgtcaagc tgggcgagaa ggtgaccgag gcgcgcaagc
     3061 tggtcggcca gatgagcgac atcatgatcc aggtgacccg cttcgtgctg gaagtcaccc
     3121 cgatcggcac cttcggcctg atcgccggcc tggtcggcag ctacgggttc gagaagctgc
     3181 tgccgctggg tcatttcgta ctggcactgt acgtggcctg tgccctgcac atcgtggtgg
     3241 tctacagcgc gctgctgctg gcgcacggcc tgaacccgct gaagttcttc cgtggtgcgg
     3301 caccgggcat gcaggtggcg tttgtcagct cgtccagctt cgcggcgatg ccggtggcgc
     3361 tgcgctcgat cacccacaac ctgggcgtga acaaggacta cggttcgttc gcggtgccgc
     3421 tgggcgccag catcaagatg gacggctgcg gcgcgatcta cccggcgctg tgcgcggtgt
     3481 tcattgcaca gtacagcggc gtgccgctga ctccggagca gtacgtggtg gtgctgatcg
     3541 cctcggtgct gggcagcttc ggcaccgccg gcgtgccggg caccgcagtg atcatggcca
     3601 cggtggtgct gagtgcggcc aacctgccgc tggagaccat cggctacctg tatgccatcg
     3661 accgcatcct ggacatgatg cgaacgatga ccaatgtgac cggccagatg ctggtgccgg
     3721 tgatcgtggc caaggaaacc ggcctgctgg atcaggcggt gtacgacaac ccgtccggca
     3781 atgtgggtgt ggacgacccc gacccgacac cgccgcgcag ctgaggttgt gcgtagcgat
     3841 gaaaggcccg ccctgaccgg cgggcctttt gtttggcagg cggctgatgc ggtaccgacc
     3901 aacggtcggt acccaccggg ggtggccggc gcctatccgt cattgcgggc ccaacaaaaa
     3961 aaagccgctg cagggcagcg gctttctcgt gtcaggcggc gcgttcgcgc caaccggtca
     4021 gatcagagat cgacccggcg ggcctgcatg aacttgttgc cccagtagcc actgagcagg
     4081 gtatccacgc gcacgtcctt gcccgagctc ggggcatgca ggaagcggcc gtcaccgacg
     4141 tagatgccga cgtggtccac gcggcccttg cggccgaaga agaccaggtc gccagcggcc
     4201 agcgcggtgc ggtcgttgat cagttcggcg ttgtcatcgt gggccatctc gcgcgagacg
     4261 cgcggcagct cgatgccgag ggcggagcgg aacacgtagc cgaccaggcc gctgcagtcg
     4321 aaaccgctgt ccggattgct gcccccccaa cggtacgggg tgcccagcag ggtcatcgca
     4381 cggcgcagca gcgactgcac cttgccgttg tcggcggcgg taccgacaac gctgccattg
     4441 gcggcgctgc tggtgtcgta gttggcgagc aggcggctga gatcgccggc caccacggcc
     4501 gagcggtcca tcagcggaat ggtgtcgttg gcggccaggt gcggcagcag ggcggccaag
     4561 gtcgcgctgg cggcggcatc gacgcggctg cgctgcggag cggcggcctc ggccttggcg
     4621 gccggtcggg cggggctctc ggccaccggg gccggagtca catcggaacg attcggagca
     4681 gtctgcgacc atgccggaag gctggtcaga cacagtgcca agccgagcaa cagcgggcgg
     4741 gcaccacgtg aagatacgga agtctggcct tcgcttttca ggtcgtcagt cgtcacgcgt
     4801 cggtcacaga aaaaaaacga tggggcatca tgccctgtaa aagcgtcaat aagttaaaaa
     4861 ttccgttagt aatccgttag ttctagggtg atgtgcgtca cagttttgaa catatcgcct
     4921 gttcatttta gcgaaggaca cgtttcgcgc cggtgtagtg gtccttccag tagggcccgc
     4981 tgagcgagtc gagccggacg gtgccgccgg tgctcggcgc gtgcacgaaa cgaccttcgc
     5041 cgacatagat gccgacatgg gtgacgttgc cgcggctgcc aaagaacacc aggtcgccgg
     5101 tcgccaggcg ctgtgggtcg atcttcgggc cctgtaccgc cgccaggtca cgcgaggtgc
     5161 gcggcagctt caggtccagc atctcgcggt acacataggc gaccagtccg ctgcagtcga
     5221 agccggaatc gggggtgttg ccgccgtagc ggtag
//
LOCUS       DAOKIP010000244         5252 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.245,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000244 DAOKIP010000000
VERSION     DAOKIP010000244.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 5252)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5252)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5252
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.245"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(6..395)
                     /locus_tag="QEL58_003570"
     CDS             complement(6..395)
                     /locus_tag="QEL58_003570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017916327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HDS1677999.1"
                     /translation="MLIDRLDHLVLTVADIERSCDFYQRVLGMQVVRFGAGRTALQFG
                     QQKINLHPASAPLQPHAAQPTPGSADLCLVTGTATADVLAHLRAQAVVVEEGPVPRTG
                     ALGPIESVYFRDPDGNLIEVSRYPSGE"
     gene            complement(496..1689)
                     /locus_tag="QEL58_003571"
     CDS             complement(496..1689)
                     /locus_tag="QEL58_003571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005417882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 18 protein"
                     /protein_id="HDS1678000.1"
                     /translation="MLRQTVAVLAVLIAGTLPIAAHAAAAPQLPIFGAYYPGGSAERY
                     PVSSIPAERLTHLFYAFSTIEDGRCTVGAEAPANFAALAELKKAHPHLRTLISIGGWG
                     AGGFSDAALSEASRKRLVDSCMALFFDRHAGSFDGVDIDWEFPVSGGPKELAHRPQDR
                     ANLTRLAQAFRVALDARGRKQGQPMLLTAALAAGRLQTDGPYDPAASYDLPALARVFD
                     FINLMSYDMGTGFSAVSTFNAPLHEVPADPLAPELRRWNNVAGAVQYYRDHGVPAHKL
                     VLGVPFYGRGFKVTGDAADGLYQAYSAPADAGDWRVIKARYLDQPGWTKHWQPQAQSP
                     WLYNPQQKIFISYEDPRSIGLRAQFAREQGLAGVFMWELTGDDEQASLLNAMLGPWQK
                     ARIGD"
     gene            1906..2907
                     /locus_tag="QEL58_003572"
     CDS             1906..2907
                     /locus_tag="QEL58_003572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1678001.1"
                     /translation="MDMSSDHDNPDDGARPDDATRDELQPLEARAYAAFHEGDLARAV
                     ALFGELTGHAPEVPYLHYMRGLAHKYLRDWPASLQDNLQSEQLHVEFDVATAWNAGIA
                     ATAVGDWAEARRQWSRCGITVPGDAGPIDGDFGVACLRLAPWSTAEVVYMRRIDPVRA
                     RIDNVPLPESGFRFGDIVLHDGASTGHRTYREQSVPVFNAMQRLQPSDMATFTVFVQC
                     DSADDIAALEAMQLPGIGMVEDWTATVRRLCRRCSYGTPHQHDDAAERADGWTRARDL
                     GIAAQGRASVEKLLATWTAAAPGRVLEAIEQREHPLSEPEPGQVWWLGEEEEEEDAG"
     gene            3084..4148
                     /locus_tag="QEL58_003573"
     CDS             3084..4148
                     /locus_tag="QEL58_003573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HDS1678002.1"
                     /translation="MRSILPVLTLLCALCAATFTASAAPPDPARLLALQQAIARDELK
                     QIRSVLLQVDGQVIYEGYFNGADAQTLHDVRSASKGVTALLVGAAIGEGRVPGVQARV
                     YDYFPAFTAHHAVDPRLRATTLQDLLSMSSLWECDDENPFSAGHEERMYVTERWLEFA
                     LALPVKGFAPWMQRPQDSPHGRAFAYCTANPFVLGAVLEQASGQPLADYAARVLEQPL
                     GITHSQWNRSPEGIGMGGGGTRYRTRDLARFGQLVLDGGRWQGRQLVPADYIAAMVQA
                     QATTPDGSDYGYQWWGLKLDVQGASRTVWAMSGNGGNYVFVLPEQRVVAVVTSQAFNR
                     SFAHPQSRRILTEFLLPALR"
     gene            complement(4117..>5252)
                     /locus_tag="QEL58_003574"
     CDS             complement(4117..>5252)
                     /locus_tag="QEL58_003574"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HDS1678003.1"
                     /translation="AAQAALQRADYYAGIGQASNNERAISLYRHALQVDPESAPARRG
                     LSRALAAQGCLFNGSPAQVKEALALASEERRRAPRDAAAHALWGYAQDCLGDMPQAMA
                     GYARALELDPADERSRASLAYLRQERGQLATALRENLSLKAPERVRFRDVQVARELEL
                     LGFTQAAAQRHARNFQLYPDNVFSNIAWPRSLYLAGAPQRARQALDEALARGTPHPQL
                     LRMKGELALLAGDPVIAAEAFERGRQLRPQQSLGQTLAGLYGAQPAQDAWIGQRLQQL
                     DASAGDGWSDTGVERALLLQAAGRTGAAVAALHQAVDDGFRDVAWLRATPLLAPLHDA
                     PGWPALLERIDTDIARQRAQVLAAAWRPEDLAALSAAPAAGTR"
BASE COUNT          834 a         1829 c         1790 g          799 t
ORIGIN      
        1 ccggatcact cgccgctggg gtaacggctg acttcgatca gattgccgtc agggtcgcgg
       61 aagtacaccg actcgatcgg ccccaatgca cctgtgcgcg gcaccggccc ctcttccacc
      121 acgacagcct gcgcgcgcag atgggccagc acatcggcag tcgccgtgcc cgtgaccagg
      181 cacagatcgg cactgcccgg cgtgggctgc gcggcgtgcg gctgcagcgg cgcactggcc
      241 gggtgcaggt tgatcttctg ctggccgaac tgcagcgcag tgcggccggc gccgaaacgc
      301 acgacctgca tgccaagcac gcgctgatag aagtcacagc tgcgctcgat gtcggcaacg
      361 gtgaggacca gatggtcgag gcggtcgatg aggatcatgc ccgcagctta acgctgcggg
      421 cgttgcctgg ctgtgcggcc tcgggccgat ggcgttgccg atcgcgccgg gcatcgcccg
      481 gcatccacgc gcggctcagt cgccgatgcg ggccttctgc cacgggccaa gcatggcgtt
      541 gagcaggctg gcctgttcgt catcgccggt cagctcccac atgaacaccc cggccaggcc
      601 ctgctcgcgg gcgaactgcg cgcgcagccc gatcgagcgc gggtcttcgt agctgatgaa
      661 gatcttctgc tgcgggttgt acagccacgg gctctgcgcc tgcggctgcc aatgcttcgt
      721 ccagccgggc tggtccagat agcgcgcctt gatcacccgc cagtcgcccg cgtcggccgg
      781 cgcgctgtag gcctggtaca gcccatcggc ggcgtcgccg gtgaccttga agccacggcc
      841 atagaacggc acgcccagca ccagcttgtg ggccggcaca ccgtggtcgc ggtagtactg
      901 caccgcgccg gccacgttgt tccagcgccg cagttccggt gccagcggat cggccggtac
      961 ttcatgcagc ggggcgttga aggtcgacac cgccgagaaa ccggtgccca tgtcgtagct
     1021 catcaggttg atgaaatcga acaccctggc cagcgccggc aggtcgtagc tggccgccgg
     1081 atcgtagggg ccatcggtct gcaagcggcc ggcggccaat gcggcggtca gcagcatcgg
     1141 ctgcccctgc ttgcgcccgc gggcgtcgag tgcgacgcgg aacgcctgcg caagcctggt
     1201 caggttggcg cgatcctgcg ggcggtgcgc cagctccttc ggcccaccac tgaccgggaa
     1261 ttcccagtcg atgtccacgc catcgaagct gccggcgtgg cgatcgaaga acagcgccat
     1321 gcaggaatcg accaggcgct tgcggctggc ctcgctcagc gccgcatcgg agaaaccgcc
     1381 cgcgccccag ccgccgatgg aaatcagcgt gcgcaggtgc ggatgcgcct tcttcagttc
     1441 ggccagcgca gcgaagttgg ccggcgcttc ggcaccgacc gtgcagcggc cgtcttcaat
     1501 ggtggaaaac gcatagaaca ggtgggtcag gcgttcggcc ggaatgctcg acaccggata
     1561 gcgctcggcc gacccgccag gatagtaggc accgaagatt ggtagctgcg gtgccgcagc
     1621 ggcgtgtgca gcgatgggca gggtgccggc aatcagcacg gcaaggacag ccacggtctg
     1681 gcgcaacatg ggatctcccg gttcgaaggc gcagccacgt tagcaaaccg atgtacctgc
     1741 ggtacggatg tcgcggcatg tcgtccagtg gacacacgtg ctcccgcgca ggacgacatg
     1801 ccagcggtca cgccactgcc atcatgcgcc gcagcaggac agccgccgac accgcgtgct
     1861 ccgtcgcccg catcggctaa ggtagccgcg gatcttaaac cttgcatgga catgagcagc
     1921 gaccacgaca accccgatga cggcgcacgg ccggacgacg ccacgcgcga cgaactgcag
     1981 ccgctggaag cccgtgccta tgccgcattc cacgaaggcg acctcgcgcg ggccgtggcc
     2041 ctgttcggtg aactgaccgg gcatgccccg gaggttccct acctgcatta catgcgcggg
     2101 ctcgcgcaca agtacctgcg cgactggccg gcctcgctgc aggacaacct gcagtcggaa
     2161 cagttgcatg tcgagttcga tgtagccacc gcatggaatg ccggtatcgc cgccactgca
     2221 gtgggcgact gggccgaagc gcggcgccaa tggagccgct gcgggatcac cgtgcccggc
     2281 gacgcggggc cgatcgacgg cgatttcggc gtggcctgcc tgcgcctggc gccgtggtcc
     2341 accgccgagg tggtctacat gcgccgcatc gatccggtgc gcgcccgcat cgacaatgtg
     2401 ccgctgccgg aaagcggctt ccgcttcggt gacatcgtgc tgcatgacgg cgcctcgacc
     2461 ggccaccgca cctaccggga gcagagtgtg ccggtgttca atgcgatgca gcgcctgcag
     2521 ccatcggaca tggccacctt cactgtgttc gtgcagtgcg attccgccga tgacatcgct
     2581 gccctggaag ccatgcagct gcccgggatc ggcatggtcg aggattggac cgcgaccgtg
     2641 cgcaggctgt gccgccgttg cagctacgga acgccgcacc agcacgatga cgcagcggag
     2701 cgcgcggacg gctggacgcg cgcgcgcgat ctcggcattg ccgcgcaagg gcgtgcctcg
     2761 gtggaaaaac tgctggcaac gtggaccgct gcggcaccgg gacgcgtgct ggaagccatc
     2821 gaacagcgcg agcatccgct gagtgagccc gagccgggac aggtctggtg gctgggggag
     2881 gaagaagagg aagaagatgc cgggtaacgc cgagcatgtt cgactgcggc gatgcctcca
     2941 acagcgtgtc aaccaaggtt gacacctacc ggggcaaagc gcagagcgtt gtcgcacaag
     3001 gccttcagaa ttcttcaggc ggctttccag cacttcagat gcggtactgg ctcaatcggg
     3061 ctccctttcg atggagcccg ccgatgcgtt cgatcctgcc cgtcctgacc ctgctctgcg
     3121 ccctgtgtgc cgcgaccttc accgctagcg ccgcgccgcc agatccggca cgcctgctgg
     3181 cgctgcagca ggccatcgcc cgcgatgaac tcaagcagat ccgcagcgtg ctgctgcagg
     3241 tcgatggcca ggtgatctac gagggctact tcaacggcgc cgacgcacag accctgcacg
     3301 acgtgcgatc ggccagcaag ggcgtgacgg cactgctggt cggcgccgcc atcggcgagg
     3361 gacgcgtgcc cggcgtgcag gcccgggtgt acgactactt cccggcgttc accgcgcacc
     3421 atgcggtcga cccgcgcctg cgcgccacca ccctgcagga cctgctgtcc atgagcagcc
     3481 tgtgggagtg cgatgacgag aacccgttct cggccggcca cgaagaacgc atgtacgtca
     3541 ccgagcggtg gctggagttc gcgctggcgc tgccggtgaa gggctttgcg ccctggatgc
     3601 agcggccgca ggacagcccg catggccgcg cgttcgccta ctgcaccgcc aacccgttcg
     3661 tgctcggtgc cgtgcttgaa caggccagcg gccaaccgct ggccgactat gccgcacgcg
     3721 ttctggagca gccgctgggc atcacccaca gccagtggaa ccgttcgccg gagggcatcg
     3781 gcatgggcgg cggcggcacc cgctaccgca cgcgtgacct ggcccggttc ggccagctgg
     3841 tactggacgg tggacgctgg cagggtcgcc agctggtccc cgcggactac atcgcggcga
     3901 tggtgcaggc gcaggccacg acgcccgatg gcagcgatta tggctaccag tggtggggcc
     3961 tgaagctcga tgtgcagggt gcgtcgcgca ccgtgtgggc gatgtccggc aatggcggca
     4021 actatgtgtt cgtgctgccc gaacagcgcg tggtggccgt ggtcaccagc caggccttca
     4081 accgctcctt cgcccatccg cagtcgcggc gcatcctcac cgagttcctg ctgccggcgc
     4141 tgcgctgagg gcggccaggt cctccggccg ccaggcggcg gccaacacct gcgcgcgctg
     4201 ccgggcgatg tcggtatcga tgcgctccag caacgcgggc caacccgggg cgtcgtgcag
     4261 gggcgccaac agcggcgtgg cgcgcagcca cgccacgtcg cggaagccat catcgacggc
     4321 ctgatgcaat gcggcgacgg ccgcacctgt acgtccagca gcctgcagca gcaatgcccg
     4381 ctccacgccc gtgtcggacc agccgtcgcc ggcgctggcg tcgagctgct gcagacgctg
     4441 cccgatccac gcgtcctgcg ccggctgcgc gccgtacagg cccgccagcg tctgccccag
     4501 tgattgctgg ggccgcagct ggcggccgcg ctcgaacgcc tctgccgcta tcaccgggtc
     4561 accggccagc agcgcgagct ctcccttcat ccgcagcagc tgcgggtgtg gcgtgccacg
     4621 cgccagcgcc tcgtccagcg cctgcctggc ccgttgcggc gcgccggcca gatacaggct
     4681 gcgtggccag gcgatattgg agaagacgtt gtccgggtag agctggaaat tgcgcgcgtg
     4741 gcgttgcgcc gcagcctggg tgaagcccag cagttccagc tcgcgcgcca cctgcacgtc
     4801 acggaaacgc acgcgctcag gcgccttcaa tgacaggttc tcgcgcagcg ccgtcgccaa
     4861 ctggccgcgc tcctgccgca gatacgccag cgacgcgcgg ctgcgttcgt cggcgggatc
     4921 cagttccagc gcacgcgcgt aaccggccat cgcctgcggc atgtcgccga ggcagtcctg
     4981 cgcatagccc cacagcgcat gggcggcggc atcgcgcggc gcccgcctgc gctcctcgct
     5041 ggccagggcc agcgcctctt tcacttgtgc cggcgagccg ttgaacaggc agccctgcgc
     5101 cgccaacgcg cgcgacagtc cccgccgcgc cggcgcggac tccggatcga cctgcagcgc
     5161 gtgccggtac aggctgatcg cgcgctcgtt gttgctggcc tggccgatgc cggcgtaata
     5221 atcagcgcgc tgcagcgccg cctgcgccgc ac
//
LOCUS       DAOKIP010000245         5200 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.246,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000245 DAOKIP010000000
VERSION     DAOKIP010000245.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 5200)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5200)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5200
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.246"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(95..1417)
                     /locus_tag="QEL58_003575"
     CDS             complement(95..1417)
                     /locus_tag="QEL58_003575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017156856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase P N-terminal domain-containing
                     protein"
                     /protein_id="HDS1678004.1"
                     /translation="MKQRTGIAAGEYKRRRRQLMDMAGEDAILVLPAAAEKVRSLDTH
                     YPFRQDSDFQYLSGFPEPDAVLVLIPGRRHGEAILFCRERDPEREAWDGSRAGQEGAV
                     AQFGMDDAYPIDDLDDILPGLLEGRSRVYYHFGRDADFDLKLIGWVNRVRSQVRHGAQ
                     PPHEFLELGHLLHEQRLFKSGAEVALMQHAAQISVRAHLAAMKAAKAGIHEYELQAEL
                     ERVFRANDAVPAYCSIVGAGRNGCILHYRDNNARSRDGELVLIDAGAEYRGYASDITR
                     TFPVNGRFSAEQRALHDLVGEAQAAALAQAKPGVPYESGHLAAVQTLTEGLLRLGLLK
                     GTLEKNLSEGLYQRFYRHKTGHWIGLDVHDVGDYRLAGDSRLLEPGMAFTIEPGLYIG
                     VDDTTVEPRWRGIGIRTEDDVLITDDGHRVLTEGLARSADEIEAVMAG"
     gene            complement(1423..1971)
                     /locus_tag="QEL58_003576"
     CDS             complement(1423..1971)
                     /locus_tag="QEL58_003576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012512005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0149 family protein"
                     /protein_id="HDS1678005.1"
                     /translation="MTELPSVDDVNRASQELGLGATAAELHGALCGWLAAGGAPGNDW
                     PARVLADDNLPPVAADSVLGQLLQVTIKQLEDRDFAFELLLTDSDDVAAQADAMFSWT
                     RSFLGGFGLGSGGRRPTLSEEGEEALTDMASLARASSEDFEAGGDDDDDALSEIEEFI
                     RVAVLLLHGDVVLASRHRQRLN"
     gene            2123..2344
                     /locus_tag="QEL58_003577"
     CDS             2123..2344
                     /locus_tag="QEL58_003577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002812462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02449 family protein"
                     /protein_id="HDS1678006.1"
                     /translation="MEPADPLAQLQDFAARVEALLERNQRLAEENRSLRHQQEQLVAE
                     RSTLLAKNEQARSRVEAMISRLKSLEQHT"
     gene            2341..2637
                     /locus_tag="QEL58_003578"
     CDS             2341..2637
                     /locus_tag="QEL58_003578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010484026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapA"
                     /protein_id="HDS1678007.1"
                     /translation="MSAEPVSVRILDREYTVGVGGDERDSLMAAARLLDARMREIRGS
                     NRMAAVDRVAVLAALNLAHELQLLRDENARQAVALQQTLADLNRRLDRAIDGGA"
     gene            2735..2920
                     /gene="ssrS"
                     /locus_tag="QEL58_003579"
     ncRNA           2735..2920
                     /ncRNA_class="other"
                     /gene="ssrS"
                     /locus_tag="QEL58_003579"
                     /product="6S RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00013"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00013"
     gene            3004..3597
                     /locus_tag="QEL58_003580"
     CDS             3004..3597
                     /locus_tag="QEL58_003580"
                     /EC_number="6.3.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-formyltetrahydrofolate cyclo-ligase"
                     /protein_id="HDS1678008.1"
                     /translation="MTDPRQALRHDLRQRRRDLSAAERIAAAESLADALLALPFAPRE
                     GAVAGYWALDGEIALHRWQLQLPEGLTYCLPVLAGDVLRFAPWRPGQPLTSNRYGIPE
                     PDVALADTLEPAQMALVVTPLVGFDPQCRRLGMGGGWYDRSFAFRHDRPAPPWLVGAA
                     FAVQQVESLPVASWDVPVDAICTEGGTLFPSAAPVNA"
     gene            3594..4073
                     /locus_tag="QEL58_003581"
     CDS             3594..4073
                     /locus_tag="QEL58_003581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014648290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EVE domain-containing protein"
                     /protein_id="HDS1678009.1"
                     /translation="MTARKRYWLMKSEPDAFSIDDLAKVKVEPWNGVRNYQARNFMRD
                     GMQVGDGILFYHSNTKVPGIVGLATVASAAYPDDTQFDPASDYHDPKSTRENPRWMLV
                     DVAFDRKLKQVIALDEIKLHADELGEGFPLVAKGNRLSVFPVTATQWKLLLSLEKKS"
     gene            4096..4743
                     /gene="rpiA"
                     /locus_tag="QEL58_003582"
     CDS             4096..4743
                     /gene="rpiA"
                     /locus_tag="QEL58_003582"
                     /EC_number="5.3.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005994531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-5-phosphate isomerase RpiA"
                     /protein_id="HDS1678010.1"
                     /translation="MSEAKRLAAEKAIEYVEDGMIVGVGTGSTVAYFIDALARIQHRI
                     KGAVSSSEQSTARLKQHGIEVIELNHSGNLSLYVDGADECDPNKCLIKGGGAALTREK
                     IIAEASERFICIVDPSKQVPVLGGFPLPVEVIPMARSLVARQIRDMTGGQPTWREGVV
                     TDNGNQILDIHNLQITDPEKLERELNQLPGVVCVGLFARRRADVVIVGGEPPVVL"
     gene            4764..>5200
                     /locus_tag="QEL58_003583"
     CDS             4764..>5200
                     /locus_tag="QEL58_003583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF192 domain-containing protein"
                     /protein_id="HDS1678011.1"
                     /translation="MSLLRSLLMLPLLALAGCATDAARHWVELDGARYQVELATNDET
                     RARGLMFRDQMAADHGMLFVHDREEMQAYWMKNTKIALDILYFDNERKLVSQQRDVPP
                     CSAGDMCPPYPSGGPARYVLELNAGQAEKLKLKDGTALTFGPG"
BASE COUNT          864 a         1826 c         1676 g          834 t
ORIGIN      
        1 cacagtgccc cgccatccca cggaatgccg cttcggcttt tgccgttgcc gttgcattga
       61 gcaggtgcag ggctgcaagc cctgccgaaa ccccttaacc cgccatcacc gcttcgatct
      121 cgtcggcgct gcgcgccagg ccttcggtca acacccgatg gccatcatcg gtgatcagca
      181 catcatcctc ggtgcgaatg ccgataccgc gccagcgtgg ctccaccgtc gtgtcgtcca
      241 cgccgatgta caaccccggc tcgatggtga acgccatgcc cggctccagc aggcgcgaat
      301 caccggccag gcggtaatcg cccacgtcgt gcacgtccag cccgatccag tgcccagtct
      361 tgtgccggta gaagcgctgg tacaggcctt cggacaggtt cttctccagc gtgcccttca
      421 gcaggcccag ccgcagcagg ccctcggtca gggtctgcac cgccgccagg tggccgctct
      481 cgtacggcac gcccggcttc gcctgcgcca gtgccgcggc ctgtgcctca ccgaccaggt
      541 cgtgcagcgc gcgctgctcg gcactgaagc ggccattcac cgggaaggtg cgggtgatgt
      601 cgctggcgta gccgcggtac tcggcaccgg catcgatcag caccagctcg ccatcacgcg
      661 accgcgcgtt gttgtcgcgg tagtgcagga tgcagccgtt gcggcctgca ccgacgatgc
      721 tgcagtacgc cggcacggca tcattggcgc ggaacacgcg ttccagctcg gcctgcagct
      781 cgtactcgtg gattcccgcc ttggccgcct tcatcgccgc cagatgggcg cgcacgctga
      841 tctgcgcggc atgctgcatc agcgccactt cggcaccgga cttgaacagg cgctgttcgt
      901 gcagcaggtg gcccagctcc aggaactcat gcggcggctg cgcgccatgg cgcacctgtg
      961 agcgcacgcg gttgacccag ccgatcagct tcaggtcgaa atccgcatcg cggccgaagt
     1021 ggtagtagac gcgcgaacgc ccttccagca ggcccggcag gatgtcgtcc agatcatcga
     1081 tcgggtaggc gtcgtccatg ccgaactgcg ccaccgcccc ttcctggccg gcacggctgc
     1141 cgtcccaggc ctcgcgctcg ggatcacgct cgcggcagaa caggatggcc tcgccatggc
     1201 gacgaccagg aatcagcacc agcaccgcat ccggttccgg aaagccactc aggtactgga
     1261 agtccgaatc ctgccggaac ggataatggg tatcgaggct gcgcaccttc tccgccgcag
     1321 ccggcagcac caggatcgcg tcctcgccgg ccatgtccat cagctggcgg cgacgacgct
     1381 tgtactcgcc ggccgcgatg ccggtgcgct gcttgatatc catcagttca ggcgctgccg
     1441 atggcgcgag gccagcacca cgtcgccgtg cagcagcagc accgccacgc ggatgaattc
     1501 ctcgatctcc gacagggcgt cgtcgtcgtc atcgccaccg gcctcgaaat cctcgctgga
     1561 ggcacgggcc aggctggcca tgtcggtcag cgcttcttcg ccctcttcgg acagggtcgg
     1621 gcggcggccg ccgctgccca ggccgaaacc gcccaggaac gagcgggtcc agctgaacat
     1681 ggcatcggcc tgcgcggcca cgtcatcgct gtcggtcagc aacagctcga acgcgaagtc
     1741 acggtcttcc agttgcttga tggtgacctg cagcagctgg cccagcacgc tgtcggcggc
     1801 caccggcggc aggttgtcgt cggccagcac gcgcgccggc cagtcgttgc cgggggcgcc
     1861 gccggcggcc agccagccgc acagtgcgcc gtgcagctcg gcagcggtgg cgcccaggcc
     1921 cagttcctgg ctggcgcggt taacgtcgtc gacggaggga agttcagtca tcgtgcggct
     1981 cgttcggaaa ggaaacccgg ggcgcgccgg cgcgcccgtg agaccccgta gtgtagcaat
     2041 ccggcggcct cctccccgtg gccgtccagc cttgctgcga caacgcttga ccgcccttgc
     2101 ccggcttgcc tatcgtgccc gcatggaacc cgccgatccc cttgcccagc tgcaggactt
     2161 cgccgcccgc gtggaggcgt tgcttgaacg caaccagcgc ctggccgagg agaaccgcag
     2221 cctgcgccac cagcaggaac agctggtggc cgagcgttcc acgctgctgg ccaagaacga
     2281 gcaggcacgc tcgcgggtgg aagcaatgat cagccggctc aaatccctgg agcagcacac
     2341 atgagtgccg aaccggtcag tgtccgcatc ctcgatcgtg aatacaccgt gggcgtcggt
     2401 ggcgatgaac gcgacagcct gatggccgcc gcgcgcctgc tcgatgcccg catgcgcgag
     2461 atccgcggca gcaaccgcat ggccgccgtg gaccgcgtgg cggtactggc cgcgttgaac
     2521 ctggcccatg aactgcaact gctgcgcgac gagaacgccc gccaggcggt ggcgctgcag
     2581 cagacgctgg ccgatctgaa ccggcgcctg gaccgcgcga tcgacggcgg cgcctgaaga
     2641 acgcgcacaa cgcgtcttct catatctgaa ttggcacgga ctgttcccga cgaacggcct
     2701 atccagatcc tgcgcgctgg ctataatggc gacgcgttct ctgcggtact cgacggcatg
     2761 tgcaaacatt cgccttgtcc cttaagaacg acaccgggag cgcgacagcg ccgggagtgc
     2821 aggtccgcct tgtagcggga agcccgatgg ttctccagcg ttcccacttg agcccccggg
     2881 ttcaaggtcg tttcgcatgc atcgacattg cggagaatgc aatattccag caagggcggc
     2941 gtcttcgggc gtcgcccttg ttctttgcgg cacaatggcg gctgatcctt gccgcacgcc
     3001 gccatgaccg acccgcgcca ggccttgcgc cacgacctgc ggcaacgccg ccgcgacctt
     3061 tccgccgctg agcgcatcgc cgccgccgaa tcacttgccg atgccctgct cgcattgccg
     3121 ttcgcgccgc gcgaaggcgc cgtggccggc tactgggcgc tggacggtga aatcgccctg
     3181 caccgctggc agctgcagtt gcccgaaggc ctcacctact gcctgccggt gttggccggc
     3241 gacgtgctgc gcttcgcacc gtggcgcccc ggccaaccgc tgaccagcaa ccgttacggc
     3301 atccccgagc ccgacgtggc gctggcagac acgctggaac cggcgcagat ggcgctggtg
     3361 gtgaccccgc tggtgggctt cgacccgcag tgccggcggc tgggcatggg gggcggctgg
     3421 tatgatcgca gcttcgcctt ccgccatgac cggccggcgc cgccctggct ggtcggtgcg
     3481 gcgttcgcgg tgcagcaggt cgagtccttg ccggtggcgt cgtgggacgt gccggtggat
     3541 gcgatctgca ccgaaggcgg caccctgttc ccctccgctg cccccgtgaa cgcatgaccg
     3601 cccgcaagcg ctactggctg atgaagtccg aaccggacgc cttctccatc gatgacctgg
     3661 ccaaggtcaa ggtcgaaccc tggaacgggg tgcgcaacta ccaggcgcgc aatttcatgc
     3721 gcgatggcat gcaggtcggc gacggcatcc tgttctatca ctccaatacc aaggtgccgg
     3781 gcatcgtcgg cctggccacg gtggccagcg cggcctatcc ggacgacacc cagttcgacc
     3841 ccgcatccga ctaccacgac cccaagagca cgcgcgagaa cccgcgctgg atgctggtgg
     3901 acgtggcttt cgaccgcaag ctcaagcagg tgatcgcgct ggacgagatc aagctgcacg
     3961 ccgacgaact cggcgaaggc ttcccgctgg ttgccaaggg caaccgcctg tcggtgttcc
     4021 cggtgaccgc cacgcagtgg aagctgctgc tgtcgctgga aaagaaatcc tgattccctg
     4081 cctgagagtt ctcccatgtc cgaagccaag cgcctggccg ccgagaaagc catcgaatac
     4141 gtcgaagacg gcatgatcgt cggtgtcggc accggttcca ccgtggccta tttcatcgat
     4201 gccctggccc gcatccagca ccgcatcaag ggcgcggtgt ccagttccga gcagagcacc
     4261 gcgcgcctga agcagcacgg catcgaagtg atcgagctga accacagcgg caacctgtcg
     4321 ctgtacgtgg acggcgccga cgagtgcgac ccgaacaagt gcctgatcaa gggcggcggt
     4381 gccgcgctga cccgcgagaa gatcatcgcc gaggccagcg agcgcttcat ctgcatcgtc
     4441 gacccgagca agcaggtgcc ggtgctgggc gggttcccgc tgccggtgga agtgatcccg
     4501 atggcgcgca gcctggtcgc ccgccagatc cgcgacatga ccggtggcca gccgacctgg
     4561 cgcgaaggcg tggtcaccga caacggtaac cagatcctgg acatccacaa cctgcagatc
     4621 accgatccgg agaagctgga gcgcgagctc aaccagctgc cgggcgtggt ctgcgtcggc
     4681 ctgttcgcgc gccgtcgcgc cgacgtggtg atcgtcggcg gcgagccgcc ggtcgtgctc
     4741 tgacccttcc aaggatcctg acgatgtcgc tgttgcgttc gctgctgatg cttccgctgc
     4801 tggccctggc cggctgcgcc accgacgcgg cccgccactg ggtcgagctg gacggcgccc
     4861 gctaccaggt cgagctggcc accaacgatg aaacccgcgc gcgcgggctg atgttccgcg
     4921 accagatggc ggccgaccac ggcatgctgt tcgtccacga ccgcgaagag atgcaggcgt
     4981 actggatgaa gaacaccaag atcgcgctgg acatcctgta cttcgacaac gaacgcaaac
     5041 tggtcagcca gcagcgcgac gtgccgccgt gctcggccgg cgacatgtgt ccgccgtacc
     5101 ccagcggcgg cccggcgcgc tacgtgctgg aactcaacgc cggccaggcc gaaaagctga
     5161 agctgaagga cggcaccgcg ctgaccttcg gcccgggcat
//
LOCUS       DAOKIP010000246         5198 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.247,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000246 DAOKIP010000000
VERSION     DAOKIP010000246.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 5198)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5198)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5198
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.247"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            174..950
                     /locus_tag="QEL58_003584"
     CDS             174..950
                     /locus_tag="QEL58_003584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019337980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HDS1678012.1"
                     /translation="MSCRPLLLALLLLPGLWPGPASARTVYRCVQGNTVSLATAPEPG
                     SRCTPKEIDDNAIQTPNLWGNMGVFSGVLYEREQDGALVYSTRNLPGSRVFLKFTVAT
                     PPGEPAHEGLGKVGKPQLAQHARQFKAAAKATGVDDAWLRAIAHAESNFDALAVSTKG
                     AQGVMQLMPDTAQEYGVRDPFSPQQSIDGGARYMRALLRRYNGDRPLAAAAYNAGIGA
                     VTRYKGVPPYAETLAYVDKVMALYARYREAMGIRTEVPAR"
     gene            complement(958..2478)
                     /locus_tag="QEL58_003585"
     CDS             complement(958..2478)
                     /locus_tag="QEL58_003585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005407883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HDS1678013.1"
                     /translation="MPRTLPLAAVLLAALAGTPASASITVAPQKLSVTSDAVHMAYAK
                     RWDDAIEQSRSGNTLGALITMEQLMEDPLLDDFDAERQGRASQVAGWTAMVQKKPVQA
                     RRYLQRAVDALPDDAQILLTLVSLELSESQPAPATKYLVRALKHADAPLPLQNDTVRY
                     LQYRLRDQPQQRMELLQALFDNGWKSGGLEPTGMWLALATLQAENGRSDDVPATLARI
                     KGPAEIIRLRSDKRFDRYVDRSDPHFDPVQAAQKHLDELRVSGLLDRALDARMAEFSS
                     TLLMLDRNEEVLALTDGMARAAAAGESPSATDAEWVGWLLNSRLTALRRLGRLDDALA
                     TAQQATRIGALGPNSIEHQLNIGFLFISLGRPQEAAQAVQGIQGLAGYGKAAQALVQF
                     AAARGQGDTRAMEAAREVILAQRDDAPLFHREMLLEQGDLDGAAAVLIEQLRSPVDRG
                     ETLASLQDMRTYPSLPGDVRIDAAWRALKQRADVQAEVARVGRIERYALVSSGTSR"
     gene            2644..4725
                     /locus_tag="QEL58_003586"
     CDS             2644..4725
                     /locus_tag="QEL58_003586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019337982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconolaconase"
                     /protein_id="HDS1678014.1"
                     /translation="MARWQWMAAGVAVATAVALAATWWETPLHTLAEPAGPAPTPLAW
                     TAQIEPLAGDGHPGDRDGASAQARFADPYALLRGADGSVYFTDAGDNNRIRRRLPDGR
                     VETVAGQGEGRIDGPALQASFNTPSGIAADAQGNLYVADTGNHAIRRIGIDGQVTTLA
                     GGEQGHADGPVAQARFDAPMGIAVDAQGQVYVADTFNDRIRVIGIDGSVRTLAGGGRP
                     GLADGVGEAARFDTPVALAFDAQGALLVADLFNNAVRRVGPDGTVSTVVAAGGVINGP
                     LSLATTHDGVLYVGDMDGRIVQVTPQGHQIALVGNGRLPRLARPSGLAMDADGSVLVA
                     DAASYRLHRLRPLPVGDLPAPALVGPAADAALPDTGGRWPLAPQDGWHEVVGTLGEVR
                     GNFKGESRHHLHGGFDVRGDVGQTVLAIAEGKVSSPMAAWSLGEQAEGLSVDRLKYIH
                     MRVGRTPRDAPFDARWQALYDEQGTLQRMRVRRGMRIHVGDRLGSINNQAHVHLAVGN
                     GGFETNAVALGFSNYADHFAPRITGVALLDDNDQPMAAGGDGVVMVARQGRGVQIVVE
                     AWDQVDNNLPRRRLGMYQVGYQILDGAGQPLQGYEQPRWNIVFNRMPPQKEAVRVAYA
                     PDSGITVHGSAVTRFRYLATNTVRDGLMETGRWQPAALPPGEYIVRASVRDYSGNEGI
                     GPREIRVRLLP"
     gene            complement(4703..5110)
                     /locus_tag="QEL58_003587"
     CDS             complement(4703..5110)
                     /locus_tag="QEL58_003587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005415088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HDS1678015.1"
                     /translation="MQQYLLLIYIEPALLQALPTEEFNALMRDCLAHADKLQAEGTLL
                     AAQKLQPVDTAQTLRVREGHSRVLDGPFAETRELLAGFNLIVARDRDEAMRVARDFPW
                     ARFGSIEVRPLEDMDAERERCGAPAAAMAAAAL"
BASE COUNT          784 a         1750 c         1867 g          797 t
ORIGIN      
        1 gagcccccac ggatgggttt acggcgtgtc ctgccgggcc acacctaccc gaccacccct
       61 caacagccca gcgccgctct gggtgttgac gttgcttctg caggtgcagg gcgcagcccc
      121 gccgaccccc attcacccaa cattagcggg cgcggccgga tcatccggcc gccatgtcct
      181 gtcgcccgct cctgctcgcg ctgttgctgc tgcccggcct gtggcccggg ccggccagcg
      241 cgcgcacggt ctaccgctgc gtgcagggca acaccgtcag tctggccacc gcaccggaac
      301 cgggttcgcg ctgcacgccg aaggaaatcg acgacaacgc catccagacc ccgaacctgt
      361 ggggcaacat gggcgtgttc agcggtgtgc tgtacgagcg cgagcaggac ggtgcgctgg
      421 tctactcgac ccgcaacctg cccggctcgc gggtgttcct gaaattcacc gtggccacgc
      481 cgccgggcga gccggcccat gagggcctgg gcaaggtcgg caagccccag ctggcgcagc
      541 acgccaggca gttcaaggcc gccgccaagg ccaccggcgt cgacgatgcg tggctgcgtg
      601 cgattgccca tgccgaaagc aacttcgatg cgctggcggt gtcgaccaag ggcgcacagg
      661 gcgtgatgca gctgatgccc gataccgcgc aggagtacgg cgtgcgtgat ccgttctcgc
      721 cgcagcagtc gattgatggt ggcgcccgct acatgcgcgc gctgctgcgc cgctacaacg
      781 gcgaccggcc gctggcggcg gccgcctaca acgccggcat cggggcggtc acccgctaca
      841 agggcgtccc gccgtatgcc gaaaccctgg cctatgtgga caaggtgatg gcgctgtacg
      901 cgcgctaccg cgaagcgatg ggcatccgta ccgaggtacc ggcgcgctag gcgctgctca
      961 gcgcgaggtg ccgctgctga ccagcgcgta gcgctcgatg cggccgacgc gtgcgacctc
     1021 ggcctgcacg tcggcacgct gcttgagcgc acgccatgcc gcatcgatgc gcacatcgcc
     1081 gggcagcgac ggataggtgc gcatgtcctg caggctggcc agggtctcgc cgcggtcgac
     1141 cggcgagcgc agctgttcga tcagcaccgc agccgcgccg tccaggtcac cctgctccag
     1201 cagcatctcg cgatggaaca gtggggcatc gtcgcgctgg gcgaggatca cctcgcgtgc
     1261 ggcctccatt gcgcgggtat cgccctggcc gcgggcggcg gcgaactgca ccagcgcctg
     1321 tgcggctttg ccatagccgg ccagaccctg gatgccctgc accgcctgcg ccgcctcctg
     1381 cgggcgaccc agcgagatga acaggaagcc gatgttcaac tggtgctcga tgctgttggg
     1441 accgagtgca ccgatgcgcg tggcctgctg cgcggtcgcc agtgcgtcgt cgagccggcc
     1501 cagccggcgc agtgccgtaa gccggctgtt gagcagccac cccacccatt cggcgtcggt
     1561 ggccgaaggc gactcacctg cggcggccgc acgggccatg ccgtcggtca gcgccagcac
     1621 ttcctcgttg cggtccagca tcagcagcgt gctgctgaat tcggccatgc gcgcgtccag
     1681 tgcgcgatcg agcaggcccg acacacgcag ttcgtccaga tgcttctgcg cggcctgcac
     1741 cggatcaaag tgtggatcgc tgcggtcgac atagcggtcg aagcgcttgt cgctgcgcag
     1801 ccggatgatc tcggcggggc ccttgatacg ggccagagtt gccgggacgt catcgctacg
     1861 gccgttctcg gcctgcaacg tggccagtgc cagccacatg ccggtcggtt ccaggccgcc
     1921 actcttccag ccgttgtcga acagcgcctg cagcagttcc atgcgttgtt gcggctggtc
     1981 gcgcaggcgg tactgcaggt acctgacggt gtcgttctgc agcggcagcg gcgcgtcggc
     2041 atgcttcagc gcccgcacca ggtacttcgt ggccggtgcg ggctggctct cggacagttc
     2101 gagcgagacc agggtcagca ggatctgcgc gtcgtccggc aatgcgtcca cggcgcgctg
     2161 caggtagcgg cgggcctgga ccggcttctt ctgcaccatc gccgtccagc cggccacctg
     2221 cgaggcacgg ccctgccgtt cggcgtcgaa gtcatccagc agcggatcct ccatcagctg
     2281 ttccatcgtg atcagcgcac ccagtgtgtt gccactgcgc gattgctcga tcgcgtcatc
     2341 ccagcgcttg gcgtaggcca tgtgcacggc atcgctggtg accgacagct tctgcggcgc
     2401 cacggtgatc gaggccgaag ccggggtgcc tgccagtgcg gccagcagca cggcggcgag
     2461 ggggagggtg cggggcatgg aggatctcca tccgtgggga caacattgaa accgctgccg
     2521 ccagcgagaa caagcgcgat gcatggaact ctggcgcccg ccggtacgat tggccgtggc
     2581 ggatcgcctg cacagcgtct attgtcggtg cctcttcagg caacaggcag gcagcgcagc
     2641 gcgatggcac ggtggcaatg gatggcagca ggcgtggcag tggcaaccgc agtggcattg
     2701 gctgcaacct ggtgggagac gccgttgcat acgctggctg aaccggcagg cccggcgccc
     2761 acgccgttgg cctggaccgc acagatcgag ccgctggccg gcgatggcca tccgggtgat
     2821 cgtgatggtg cctcggcaca ggcccgcttt gccgatccct atgcattgct gcgcggcgcc
     2881 gatggcagcg tgtacttcac cgatgccggt gacaacaacc gcatccgccg ccgcctgccc
     2941 gatggccgtg tcgaaaccgt ggccgggcag ggcgaagggc gcatcgatgg cccggcgttg
     3001 caggccagct tcaacacccc ttccggcatt gccgccgatg cgcagggcaa cctgtatgtg
     3061 gccgataccg gcaaccatgc gatccgccgc atcggcatcg atggccaggt gaccacgctg
     3121 gccgggggcg agcagggcca tgccgatgga ccggtcgcgc aggcgcgctt cgatgcaccg
     3181 atgggcatcg cggtggatgc gcagggccag gtctacgtgg ccgatacgtt caacgatcgc
     3241 atccgggtga tcggcatcga cggcagcgtg cgtacgctgg ccggcggtgg gcgtccgggg
     3301 ctggccgatg gcgtgggcga ggcggcgcgc ttcgatacgc cggtggcact ggccttcgac
     3361 gcgcagggcg cgctgctggt ggccgacctg ttcaacaatg cggtgcgccg cgtcggcccc
     3421 gatggcacgg tcagcacggt ggtggctgcc gggggcgtga tcaacggccc gctgtcgttg
     3481 gccaccaccc acgacggcgt gctgtacgtg ggggacatgg atggccggat cgtgcaggtg
     3541 acaccgcagg gccatcagat cgcgctggtg ggcaacggcc gcctgccgcg cctggcccgc
     3601 cccagcgggt tggcgatgga tgccgatggc agtgtgctgg tggccgatgc ggccagctac
     3661 cgcctgcacc ggctgcgccc actgccggtg ggggacctgc cggcaccggc gctggtcggc
     3721 cccgccgccg acgccgcgct gccagacacg ggcgggcgct ggccgctggc accgcaggac
     3781 ggctggcacg aagtggtcgg cacgctgggc gaggtgcgcg gcaacttcaa aggcgagagc
     3841 cgccaccacc tgcacggcgg cttcgatgtg cgcggcgatg tcgggcagac cgtgctggcg
     3901 atcgccgagg gcaaggtcag cagcccgatg gccgcctgga gcctgggcga gcaggccgaa
     3961 ggcctgtcgg tggatcgcct caagtacatc cacatgcggg tcggccgcac gccgcgcgat
     4021 gcgccgttcg acgcacgctg gcaggcgctg tacgacgagc agggcacgct gcagcggatg
     4081 cgcgtgcgcc gcggcatgcg catccacgtg ggtgatcgcc tgggcagcat caacaaccag
     4141 gcgcacgtgc acctggcagt gggcaacggt ggcttcgaga ccaacgcggt ggcgctgggc
     4201 ttcagcaact acgccgatca cttcgcaccg cgcatcaccg gtgtggccct gctggacgac
     4261 aacgaccagc cgatggccgc aggtggcgat ggcgtggtga tggtggcgcg ccagggtcgc
     4321 ggcgtgcaga tcgtggtcga ggcctgggac caggtcgaca acaacctgcc gcgccgccgc
     4381 ctgggcatgt accaggtggg ctaccagatc ctcgatggcg ccggacagcc gctgcagggt
     4441 tacgagcagc cgcgctggaa catcgtgttc aaccgcatgc cgccgcagaa ggaagcggtg
     4501 cgcgtggcct atgcaccgga cagtggcatc accgtgcatg gcagcgcggt gacccggttc
     4561 cgttacctgg ccaccaacac cgtgcgtgac ggcctgatgg aaaccggccg ctggcagccg
     4621 gcggcgctgc cgccgggcga gtacatcgtg cgtgccagcg tgcgcgacta cagcggcaac
     4681 gaaggcatcg gcccgcgcga gatcagagtg cggctgctgc catagcggcg gcgggggcgc
     4741 cgcagcgttc gcgctcggcg tccatgtctt cgagtggacg cacctcgatg ctgccgaagc
     4801 gtgcccacgg gaagtcgcgg gcgacgcgca tggcttcatc gcggtcgcgc gccacgatca
     4861 ggttgaagcc ggccagcagt tcgcgggttt cggcaaacgg gccatccagc acgcggctgt
     4921 gcccctcgcg cacgcgcagg gtctgcgcgg tatcgaccgg ctgcagcttc tgcgcggcca
     4981 gcagcgtgcc ttcggcctgc agcttgtcgg cgtgggcgag gcagtcgcgc atcagcgcgt
     5041 tgaattcttc ggtaggcagc gcctgcagca gggcaggctc gatgtagatc agaagcaggt
     5101 actgctgcat ggcacggtcc tggcgcgggc ggggtgccca tgatggcgca ggattgcgcg
     5161 tgggcatgtt gcagcgcggg aggcgcgcct tcggcggg
//
LOCUS       DAOKIP010000247         5140 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.248,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000247 DAOKIP010000000
VERSION     DAOKIP010000247.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 5140)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5140)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5140
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.248"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            27..2621
                     /locus_tag="QEL58_003588"
     CDS             27..2621
                     /locus_tag="QEL58_003588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014035873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase M14"
                     /protein_id="HDS1678016.1"
                     /translation="MSVHRRAVLPLLIAAITALSSPQPAQAQSAYFFPQAIEAAAFDA
                     SIPTPEQFLGYPIGSRYTRHDQLLAYFQELAKRSDKISVREIGRSYEGRPLLIATVTS
                     AGNHARLEQIRQQHATLVDPAQPRSAAGDSPVVVWLGYSVHGNETSSAEAAMLTAYYL
                     VANQSADTQRWLQQAVVLFDPAQNPDGRDRAANWHNAWASDPASADPADKEHVEPFPQ
                     GRTNHYFTDLNRDWLALTQQESRPKVEVFHQWYPNVQIDFHEMGKDSTYYFEPSPKSM
                     HSPLIPAASYEFNKTLAKYHAQALDALGSLYYTGENFDNFSPVYGSTYPDFHGAVGVT
                     VEQASSRGRVQESVNGVLTFPFTIRNQVATGLGTVRGAVAERSGLFDLQKQFFQSALK
                     QAAQQPVKSFVFGDAHDPALTRRLLELLLLHRIEVRALDRAVTVDGQHFAPGNAYVVP
                     VQQAQFRLVHSIFAETPPIKGDVFYGSTSYAIAPAYGVAFGGSRSRIDGGARIAELPP
                     IQGEVLGGQAGFAYVIDWRDYNAGRALAVLQGKGLSTRATFQPFTAATAQGEADFAAG
                     SIVIPVAGQPLQGAALLDAVRAAARAARVQVHALSSGRSREGVDLGSDGVKALRKPAV
                     ALVMGEGVAATEIGSAWFLLDQQLQLPASKLDPQQLGKVPLDRYTTIVLSGGTYTGVD
                     ATAVAALKRWVQAGGSLVTYGSASKWAIEQKLAEGETLGKEEEAAGESRRAFGDQRDI
                     AAIERVSGNILSADVDTSHPLAFGVPRRQLSINKENTVTLQPSANPFSTVVRIDTPPR
                     VNGYLSERNRTRVAGSAWLLVSAQGQGNVVLFADDPAHRKHWHGTDRLLINAIFFGNL
                     VNPAKARG"
     gene            complement(3147..4568)
                     /locus_tag="QEL58_003589"
     CDS             complement(3147..4568)
                     /locus_tag="QEL58_003589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005407956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HDS1678017.1"
                     /translation="MSFESLGLAPFLLRALAEQGYENPTPIQQQAIPLALAGRDLLAG
                     AQTGTGKTAAFGLPLLQHLGTASQEVRSGPRKPRALILAPTRELATQVHDSLRGYSKY
                     LRIPSACIYGGVGMGNQLDILRRGVDLLVACPGRLIDHLERRSIDLSGIELLVLDEAD
                     RMLDMGFLPSIKRILAKLPKQNRQTLLFSATFEDNIRQLALEFMRNPEQIQVTPKNTV
                     AETITHRVHPVDAGRKRDLLLHLLAQDSREQTLVFARTKHGSDKLATFLEKSGIKTAA
                     IHGNKSQGQRLRALGDFKAGRVTVLVATDIAARGIDINELPKVINFDLPMVAEDYVHR
                     IGRTGRNGATGQAISLVAQDEVKLLRAIVRLLGRDMDIRDVPGFELQTPIRWGNSAPG
                     KAEHDTGERAPRKNHARRPHGDAPRHAHAGPKKAGGGRREGGGNGQQRAGAGAGQGQR
                     RGGGGNGGGRGRGQGGNGGGRAG"
BASE COUNT          853 a         1669 c         1751 g          867 t
ORIGIN      
        1 tgccgttgag ttccagggga gtcaccgtgt ccgtgcatcg tcgtgccgtt cttccgttgc
       61 tgattgctgc catcaccgcg ttgtcctcgc cgcagccggc gcaggcacag agtgcctact
      121 tcttcccgca ggccatcgaa gcggccgcat tcgacgcgtc cattcccacg ccggaacagt
      181 ttctcggcta cccgatcggc agccgttaca cccggcatga ccagctgttg gcgtacttcc
      241 aggaactggc gaaacgctcg gacaagatca gcgtgcgcga gatcggccgc agctacgagg
      301 gacgcccgtt gttgatcgcc accgtcacct ctgcgggcaa ccacgcgcga ctggaacaga
      361 tccgccagca gcacgcgacc ctggtcgatc cggcgcagcc gcgcagcgcc gccggtgaca
      421 gcccggtggt ggtgtggctg ggctacagcg tgcacggcaa cgagacgtcc agtgccgaag
      481 ccgcgatgct gaccgcgtac tacctggtgg ccaaccagag tgccgacacc cagcgctggc
      541 tgcagcaggc agtggtgctg ttcgacccgg cgcagaatcc ggacggccgt gatcgcgcgg
      601 ccaactggca caacgcctgg gcctcggacc cggcttcggc cgatccggcc gacaaggaac
      661 acgtcgagcc gttcccgcag ggccgcacca accactactt caccgacctc aaccgcgatt
      721 ggcttgcgct gacccagcag gagtcgcggc cgaaggtgga ggtgttccac cagtggtacc
      781 cgaacgtgca gatcgacttc cacgagatgg gcaaggacag cacctactac ttcgagccgt
      841 cgccgaagag catgcacagc ccgttgatcc cggcggcatc gtacgaattc aacaagaccc
      901 tggccaagta ccatgcgcag gcgctggatg cgctgggttc gctgtactac accggtgaaa
      961 acttcgacaa cttctcgccg gtctatggct ccacctatcc agacttccac ggcgcggtcg
     1021 gcgtgaccgt cgagcaggcc agttcacggg gccgcgtgca ggaatcggtg aatggcgtgt
     1081 tgacgttccc gttcaccatc cgcaaccagg ttgctacagg gctgggcaca gtgcgtggcg
     1141 cggtcgccga gcgcagtggc ctgttcgacc tgcagaagca gttcttccag agcgcgctga
     1201 agcaggctgc acagcagccg gtgaagagct tcgtgttcgg cgatgcgcat gacccggcac
     1261 tgacccggcg cttgctggag ctgttgctgc tgcatcgcat cgaagtgcgc gcgctggatc
     1321 gtgcggtcac cgtggatggg cagcacttcg cgccgggcaa cgcctacgtg gtgccggtgc
     1381 agcaggcgca gttccggctg gtgcattcga tcttcgccga gacgccgccg atcaagggcg
     1441 acgtgttcta cggcagcacc agctacgcga tcgcaccggc ctacggcgtg gcgttcgggg
     1501 gcagtcgcag ccgcatcgac ggtggcgccc gcatcgcgga gcttccgccg atacagggcg
     1561 aggtgcttgg cggccaggcc gggtttgcct atgtcatcga ctggcgcgac tacaacgcgg
     1621 gccgggcgct ggcggtgctg cagggcaagg gcctgagtac acgcgcaacc ttccagccgt
     1681 tcactgccgc caccgcacag ggcgaggcgg acttcgccgc cggcagcatc gtcattccgg
     1741 tggccgggca gccgctgcag ggcgcggcgc tgctggacgc ggtgcgcgcc gccgcacgcg
     1801 ctgcccgcgt gcaggtgcat gcgctgtcca gtgggcgcag ccgcgagggc gttgacctgg
     1861 gcagcgatgg cgtcaaggcg ctgcgcaagc cagccgtggc actggtgatg ggcgagggcg
     1921 tggccgccac cgagattggc tcggcctggt tcctgcttga ccagcaactg cagcttccgg
     1981 ccagcaagct ggatccgcag cagctgggca aagtgccgct ggatcgctac accacgatcg
     2041 tgctgtccgg cggcacctat accggcgtcg atgccaccgc ggtggctgca ctgaagcgct
     2101 gggtgcaggc cggaggctct ctggtgacct acggcagtgc ttcgaagtgg gcgatcgaac
     2161 agaagctggc cgagggcgag acgcttggca aggaagaaga ggctgctggt gagagccgcc
     2221 gtgcgttcgg cgaccagcgc gatattgccg cgatcgagcg ggtcagcggc aacatcctca
     2281 gtgccgacgt ggacaccagc catccgttgg cgttcggcgt gccgcgccgg cagctgtcga
     2341 tcaacaagga aaacacggtg acgttgcagc cgagcgcgaa tccgttctcg accgtggtgc
     2401 gcatcgacac gccgccgcgg gtgaatggct acctgtcaga gcgcaaccgc acgcgggtgg
     2461 cgggcagcgc gtggctgctg gtgtcggcgc aggggcaggg caacgtggtg ctgtttgccg
     2521 atgatccggc gcatcgcaag cactggcacg ggacggatcg actgctgatc aacgcgatct
     2581 tcttcgggaa tctggtgaat ccggcgaaag cgcggggttg aggctttacg cgccttgact
     2641 gatgcgtgtg ggggaggccg ggtgggctgc gcaggacacg ccgtaaaccc gtccttgggg
     2701 gctcgatggc gccatccatg gcgccaacgg tcctgcgcag cccacccggc ctcccctcgg
     2761 cggtttcctg cgggcgcgga tgcatcaaac ccaaggcggg agcagaagca aaagcaaaag
     2821 caaaaagccg tcggcttcgg tttttgcctt tgaatttgaa tttgatcttt cttctcccgg
     2881 ctacccggcg ggacaagaag cgcaggcaat gcttgaagcg gatgggcatg ggggcagcgc
     2941 agaaccgttg gcgccatgga tggcgccatc gagcttacat ggacgtattt acagcgtgtt
     3001 ctgcgctgcc cccatgccca tccgccctcg gtactgccac cgcgtgatct atcacccggt
     3061 agcccgcaac aaaaaaggac ggcgcctcag cgccgtccct cgatagcctc ccgcgcagcg
     3121 ggaagctcca tccatgtcag ctgcgatcag ccggcgcgac cgccgccgtt gccaccctgg
     3181 ccgcggccac ggccgccccc attgccgcca ccgccacgac gctggccctg accggcgcct
     3241 gcacccgcac gctgctggcc attgccaccg ccctcgcgtc ggccaccacc ggccttcttc
     3301 gggcccgcat gcgcatggcg cggtgcatca ccgtgcggac ggcgcgcgtg gttcttgcgc
     3361 ggtgcgcgct cgccggtatc gtgctcggcc ttgcccggtg cactgttgcc ccagcggatc
     3421 ggcgtctgca gctcgaagcc cggcacatcg cggatgtcca tgtcgcggcc cagcaggcgc
     3481 acgatcgcgc gcagcagctt cacttcatcc tgcgccacca gcgaaatcgc ctggccggtg
     3541 gcaccgttgc ggccggtacg gccgatgcgg tgcacgtaat cctcggccac catcggcagg
     3601 tcgaagttga tcaccttcgg cagctcgttg atatcgatgc cacgcgcggc gatgtcggtg
     3661 gccaccagca cggtcacgcg gcccgccttg aagtcgccca gcgcacgcag gcgctggccc
     3721 tggctcttgt tgccgtggat cgccgcggtc ttgatgcccg acttctccag gaacgtggcc
     3781 agcttgtcgc tgccatgctt ggtgcgtgcg aacaccaggg tctgctcgcg gctgtcctgc
     3841 gccagcaggt gcagcagcag gtcgcgcttg cggccggcat cgaccgggtg cacgcggtgg
     3901 gtgatggttt cggccacggt gttcttcggc gtcacctgga tctgttccgg gttgcgcatg
     3961 aactccagcg ccagctggcg gatgttgtcc tcgaaggtgg ccgagaacag cagcgtctgg
     4021 cggttctgct tcggcagctt ggccaggatg cgcttgatcg acggcaggaa gcccatgtcg
     4081 agcatgcggt cggcttcgtc cagcaccagc agttcaatgc cggacaggtc gatgctgcga
     4141 cgctccaggt ggtcgatcag gcggcccggg caggccacca gcaggtccac gccgcggcgc
     4201 aggatgtcca gctggttgcc catgccgacg ccgccgtaga tgcaggcgct ggggatacgc
     4261 aggtacttgc tgtagccgcg caggctgtca tgcacctggg tggccagttc gcgggtcggg
     4321 gccaggatca gcgcgcgcgg cttgcgcggg ccgctgcgca cttcctgcga ggcggtgccc
     4381 aggtgctgca gcagcggcag gccgaaggcg gcggtcttgc cggtgccggt ctgagcgccg
     4441 gccagcaggt cgcgaccggc cagcgccagc gggatcgcct gctgctggat cggggtcggg
     4501 ttttcgtagc cctgctcggc gagcgcacgc agcaggaagg gcgccaggcc cagcgattca
     4561 aaagacattg agtttgctcc aagtacaaga aacgcctgtc cgactggaca gacgggggca
     4621 gatcaaactg atcggctgac tcggagcgtt cccgtgaacc gcgctgcgag aattgggtgc
     4681 agccggcacg aagcgcaggc tggaatgcgt gacgaacggc gtcggagtgg gggcgggcga
     4741 agagggcgga cccaggtcgc cggcgatccc ggagggaaac ggacggccgc tgcagacccc
     4801 gcaagtctaa acgatgtttg agacttcacg caaaaaggcc tgttcaggta ggggttctgc
     4861 ctgcagggct gcgccctgca cccgcagagg ccagagccaa ggccggagca agatcaaaag
     4921 ccgggttcct gtgggttggc ggggtgggtc cggtggcagg gggcgccgta aatacgtcca
     4981 tgtaggctcg gtcgcggcat ccatgccgct cacgcccctg ccaccggacc caccccgcct
     5041 tcgacagttt tccgcgatct gtcagatctc attcgatttg tctcgatatc tgatggattt
     5101 cgacgatgaa tgacgtggat gttcgatccg tcatcgggaa
//
LOCUS       DAOKIP010000248         5029 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.249,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000248 DAOKIP010000000
VERSION     DAOKIP010000248.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 5029)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5029)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5029
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.249"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(98..313)
                     /locus_tag="QEL58_003590"
     CDS             complement(98..313)
                     /locus_tag="QEL58_003590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019337428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1678018.1"
                     /translation="MTLIRALPSLTDTERPRNASVREQLQQLEDVAREEIRELQQLAD
                     ARPAPSRADNELLGLAWDLGLDGEALR"
     gene            complement(412..1602)
                     /locus_tag="QEL58_003591"
     CDS             complement(412..1602)
                     /locus_tag="QEL58_003591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein"
                     /protein_id="HDS1678019.1"
                     /translation="MYSRIFIRLAAPLALTLLLPFAIGFEWPAALRWAILTTMTLSWL
                     GFAWWTTRAQAHRSPEHARVLREQDQLLTELRNFVGNEIDGSRGEVERARDLIRQAVS
                     SLGGSFDAMNRKSRQQSQALSRIVDRAGDEGSAGLDVARFAQHASHRMEQLVEALEQV
                     SGQSSTTVQHIDQMAQHLDGIFALLEDVKSIADQTNLLALNAAIEAARAGEAGRGFAV
                     VADEVRNLSERSTTFNEQIRKLAHSSKDAIAKVRETVSHMASRDMDRSREARQEAAAM
                     LDNVAQINASLGDGMREVSECARSIDGSVAEAVRALQFEDIATQALGGVHTHLDRLTA
                     INREAVALQELLHRNGGVFDEEIATALQRTGSRLRELRSEWERPPHKPVAQQSMGAGT
                     VELF"
     gene            complement(1765..2379)
                     /gene="hflD"
                     /locus_tag="QEL58_003592"
     CDS             complement(1765..2379)
                     /gene="hflD"
                     /locus_tag="QEL58_003592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012480133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="high frequency lysogenization protein HflD"
                     /protein_id="HDS1678020.1"
                     /translation="MSFTVDDRVLALAGIAQALQQVRRIADTGHSDAAAVRTAMDSVF
                     RVDASSPQEVFGDRDALKAGLRLLHNYFRSQGQDPILPKLALSVLQLERRFVQDGATV
                     NKVASGIERAQRQATELGDSGHPDVLANLGGLYADTISHLKPRVMVQGNPHYLGQAGV
                     VAEIRALLLAAVRSAVLWRQLGGSYWDFLFSRKAMIEAVDRQLA"
     gene            complement(2376..3518)
                     /gene="mnmA"
                     /locus_tag="QEL58_003593"
     CDS             complement(2376..3518)
                     /gene="mnmA"
                     /locus_tag="QEL58_003593"
                     /EC_number="2.8.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005416474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiouridine(34) synthase MnmA"
                     /protein_id="HDS1678021.1"
                     /translation="MSTPRVMVGVSGGVDSSVAAWRLVQQGEAVAGLFMQNWADDGSG
                     DCRAEDDRRDAVAVCGLLGIPFHFRDFSSEYWQGVFEHFLAEYAAGRTPNPDVLCNRE
                     VKFKHFLDAARELGAERIATGHYARVTQRGGQWLLLRGADRSKDQSYFLHQLGQQQLA
                     ATLFPIGDLEKSDLRRIARDVGLPTHAKKDSTGICFIGERDFREFLGRYLPAKPGQIL
                     DPADGSVIAEHPGVFYFTLGQREGLNIGGVRGRPAAPWYVVGKDVASNVLYVDQDRDS
                     RWMLSDRLRSETAHWIAGSPPARRFECTAQTRYRQPDEPCTVEVMDDGSVLVSFARPQ
                     RAVTPGQSLVLYDGDVCLGGAVIAATDAPLEQRLRTTPSPFEVIAA"
     gene            complement(3515..3976)
                     /locus_tag="QEL58_003594"
     CDS             complement(3515..3976)
                     /locus_tag="QEL58_003594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005413281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HDS1678022.1"
                     /translation="MNATPDPRWAPHATVATVVVDGGRVLLVEETIEGRQVLNQPAGH
                     LEPGESLAEAALRETREETGWTVQLTHFIGCYQWTAGDGTAFLRFCYAARPLSHDPAQ
                     PLDTSIDRALWLTPAELQSAGERLRSPLVWQVVADFLGGQRHPLSLVREVA"
     gene            complement(3978..4451)
                     /locus_tag="QEL58_003595"
     CDS             complement(3978..4451)
                     /locus_tag="QEL58_003595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014647079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1678023.1"
                     /translation="MKRTLLPALLIGLAAAGSAAAATEADKAVARHLDKLGYTYEVDE
                     DGDYRMVFDVEGDRTQMVYVRSSVEDFGTHNIREIWSPAYIAKTKQFPVAVANRLLED
                     SQDAKMGGWVKQDTTAMFVVKIDADASADQLSDAIDAAIRTADAMELELTKKDEF"
     gene            4564..4890
                     /gene="clpS"
                     /locus_tag="QEL58_003596"
     CDS             4564..4890
                     /gene="clpS"
                     /locus_tag="QEL58_003596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005416477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease adapter ClpS"
                     /protein_id="HDS1678024.1"
                     /translation="MPHESSPDSHHEHGVAVEPARPEVAPPPFYQVMLLNDDYTPMDF
                     VVDVLQQFFSMDLDKATQVMLHVHTRGRGVCGVFTREVAETKVAQVNEYSRMNQHPLL
                     CTMEKA"
BASE COUNT          790 a         1649 c         1745 g          845 t
ORIGIN      
        1 cgcgaacatc cacgcatcag aatcctgctc tggtgggtgc cgaccttggt cggcacggat
       61 gcctgcgccc gcgttcatcc acgcatggcg tggatctcta tctcaaggct tccccatcca
      121 ggcccaggtc ccacgccagg cccagcagtt cgttgtccgc gcgggacggc gcaggccgcg
      181 catcggccag ttgctgaagc tcgcgtatct cctcgcgggc gacgtcctcc agctgttgca
      241 gctgctcacg cacgctcgcg ttgcgcgggc gctcggtgtc ggtgagggag ggcagggcgc
      301 ggatcagggt catggtgcgc gtacaggatg catccaacgg cgggtcacag gcaaaggccc
      361 cggacgaacc ggggcctttc gggctgccgg tggcggcagc ggacatcagg atcagaacag
      421 ctcgacggta ccggcgccca tgctctgctg ggcaaccggc ttgtgcggcg ggcgctccca
      481 ttcgctacgc agttcgcgca agcggctgcc agtgcgctgc agggcggtgg cgatctcttc
      541 gtcgaacacg ccgccattgc ggtgcagcag ctcctgcagg gccaccgctt cgcggttgat
      601 cgcggtcagt cggtccaggt gggtgtgcac gccgcccagc gcctgggtgg cgatgtcttc
      661 gaactgcagg gcgcgcacgg cctcggccac gctgccatcg atcgaacggg cacactcgga
      721 gacttcgcgc atgccgtcgc ccagcgaggc gttgatctga gcgacgttgt cgagcatggc
      781 cgccgcttcc tggcgcgctt cacgggagcg gtccatatcg cgcgaggcca tgtgcgagac
      841 cgtctcgcgc accttggcga tggcgtcctt ggagctgtgc gccagcttgc ggatctgctc
      901 attgaacgtg gtcgagcgct cggacaggtt gcgcacttcg tcggcgacca cggcgaagcc
      961 acgaccggct tcaccggcac gcgcggcttc aatggcagcg ttcagggcca gcaggttggt
     1021 ctggtcagcg atcgacttga cgtcttccag cagcgcgaag atgccatcca ggtgctgcgc
     1081 catctggtcg atgtgctgca cggtggtact gctctggccg ctgacctgct ccagcgcttc
     1141 caccagctgc tccatgcgat ggctggcgtg ctgggcaaat cgggcaacgt cgaggccggc
     1201 gctgccttca tcaccggcgc ggtcaacgat gcgcgacagg gcctggctct gctggcgcga
     1261 cttgcggttc atcgcatcga agctgccgcc caggctggaa acggcctggc ggatcaggtc
     1321 acgggcacgt tccacttcgc cgcgcgaacc gtcgatctcg ttgccgacga agttgcgcag
     1381 ttcggtcagc agctggtcct gctcacgcag cacgcgggca tgttccgggg aacggtgcgc
     1441 ctgggcgcgg gtggtccacc acgcaaagcc gagccagctc agcgtcatcg tggtcaggat
     1501 cgcccagcgc agggcggccg gccattcgaa accgatggcg aaggggagca gcagggtcag
     1561 agccaggggg gcggccagac ggatgaaaat gcgtgagtac atggacgttc tcgggaggtg
     1621 cacggaggat gtatcggccg tacccccttt ctctttaacg tcgatgtgcc ctgaagtgca
     1681 ttctgaatgc gccggttttc cggcgcctgg cgcgtcgttg cgtggcgcgc tcgccgggcg
     1741 atgcccggcg aatgtgggtg aagatcaggc cagctgacgg tccacggcct cgatcatcgc
     1801 cttgcggctg aacaggaagt cccagtagct gccgcccagc tgccgccaca gcaccgccga
     1861 gcgtaccgcg gccagcagca gggcgcggat ctcggcgacc acgccggcct ggcccaggta
     1921 gtgcgggttg ccctgcacca tcacccgcgg tttcaggtgg ctgatggtgt cggcatacag
     1981 gccgcccagg ttggccagca catccgggtg gccgctgtcg cccagttcgg tggcctggcg
     2041 ctgggcgcgt tcgatgcccg aggcaacttt gttcacggtc gccccgtcct gcacgaagcg
     2101 ccgctccagc tgcagcaccg acagcgccag cttgggcagg atcgggtcct ggccctggct
     2161 gcggaagtag ttgtgcagca ggcgcaggcc cgccttcagc gcgtcgcggt caccgaacac
     2221 ctcctgcggc gaggacgcgt cgacgcggaa cacgctgtcc atggcggtgc gcacggcggc
     2281 ggcgtcggaa tggccggtat cggcgatgcg gcgtacctgc tgcagggcct gggcaatgcc
     2341 ggccagggcc aggacgcggt cgtcgacggt gaaactcatg cagcgattac ctcaaaagga
     2401 gaaggggtgg tgcgcaggcg ctgttccagc ggtgcgtcgg tggcggcgat caccgcgcca
     2461 cccaggcaca catcaccgtc atacagcacc agcgactggc cgggggtgac ggcgcgttgc
     2521 gggcgggcga agctgaccag cacgctgcca tcgtccatca cttcgaccgt acacggctcg
     2581 tcgggttggc ggtagcgggt ctgtgcggtg cattcgaagc gccgcgctgg cggtgagccg
     2641 gcaatccagt gcgcggtctc cgagcgcagg cggtcagaca acatccagcg gctgtcgcgg
     2701 tcctggtcca cgtacagcac gttgctggcc acgtccttgc cgaccacgta ccacggcgcg
     2761 gccgggcggc cgcgtacgcc gccgatgttc aggccttcgc gctggcccag ggtgaaataa
     2821 aacacgcccg gatgctcggc gatcacgctg ccgtcggccg ggtcgaggat ctggcccggc
     2881 ttggccggca ggtaacggcc aaggaactcg cggaagtcgc gctcgccgat gaagcagatg
     2941 ccggtggagt ccttcttggc gtgggtcggc aggccgacgt cgcgcgcgat ccggcgcagg
     3001 tcgctctttt caagatcgcc gatcgggaac agcgtggccg ccagctgctg ctggccgagc
     3061 tggtgcagga agtagctctg gtccttggag cggtcggcgc cgcgcagcag cagccactgg
     3121 ccgccgcgct gggtcacccg cgcgtagtgg ccggtggcga tgcgctcggc acccagttcg
     3181 cgggccgcgt ccaggaagtg cttgaacttc acttcgcggt tgcacagcac gtccgggttc
     3241 ggggtgcggc cggcggcgta ctcggccagg aagtgctcga acacgccctg ccagtactcg
     3301 ctggagaaat cgcggaagtg gaacggaatg ccgagcaggc cgcagaccgc caccgcatcg
     3361 cggcggtcat cttcggcgcg gcagtcgccg ctgccgtcgt cggcccagtt ctgcatgaac
     3421 aggccggcta cggcttcgcc ctgttgtacc aggcgccagg cggcgaccga ggaatcgacg
     3481 ccaccggaga cgcccaccat cacccgcgga gtgctcatgc gacctccctg accagcgaaa
     3541 ggggatggcg ctggccaccc aggaaatcag ccaccacctg ccagaccaac gggctgcgca
     3601 ggcgttcgcc agcggactgc agctcggccg gggtcagcca cagcgcgcgg tcgatgctgg
     3661 tgtccagcgg ctgcgccggg tcatgcgaga gcgggcgtgc cgcatagcag aagcgcagga
     3721 aggcggtgcc gtcgccggcg gtccactggt agcagccgat gaaatgggtc agctgtaccg
     3781 tccagccggt ttcctcgcgg gtctcgcgca gggccgcctc ggccaggctt tcgcccggct
     3841 cgaggtggcc ggcgggctgg ttcagcacct gccggccctc gatggtctct tcgaccagca
     3901 gcacgcggcc gccgtcgacc acgacggtgg cgacggtggc gtgcggtgcc cagcgcgggt
     3961 ccggcgtggc gttcacctca gaattcgtcc ttcttggtca gttccagctc catcgcatcg
     4021 gcagtgcgga tggccgcatc gatggcatcg ctgagctggt cggcgctggc atcggcgtcg
     4081 atcttcacca cgaacatggc ggtggtgtcc tgcttcaccc agccgcccat cttggcatcc
     4141 tgcgaatcct ccagcaggcg gttggccacg gccaccggga actgcttggt cttggcgatg
     4201 taggccggcg accagatctc gcggatgttg tgggtaccga aatcttccac cgacgaacgc
     4261 acatagacca tctgcgtgcg gtcaccctcg acgtcgaaga ccatgcggta atcgccgtcc
     4321 tcgtccacct cataggtgta acccagcttg tccaggtggc gggccacggc cttgtcggcc
     4381 tcggtcgcgg cggcggcaga gccggcggcg gccaggccga tcagcagggc aggcagaagg
     4441 gtccttttca tgaagatcct gtgaagcaga tttgaaagaa gctgcaattg tgacggtggg
     4501 cgtccgtgcc gtccaatccg cggcaggccg acgcaggccg ggcgcaacct ctataatggg
     4561 tggatgcccc atgagtcttc ccccgattcc catcacgagc acggcgttgc cgtggagccc
     4621 gcgcgcccgg aagtggcgcc gccgccgttc taccaggtga tgctgctcaa cgacgactac
     4681 accccgatgg atttcgtggt ggacgtgctg cagcagttct tcagcatgga cctggacaag
     4741 gccacgcagg tgatgctgca cgtgcatacc cgtggccgcg gcgtgtgcgg ggtgttcacc
     4801 cgcgaagtgg ccgagaccaa ggtcgcccag gtcaacgagt actcgcggat gaaccagcat
     4861 ccgttgctgt gcacgatgga aaaggcctga acggcgtttt gtagcgtcga gccatgctcg
     4921 actgtctttc gtccgggcgt atcgcatccg gaccccgcgt gcccaccaag gtgggcacct
     4981 accagggcac aggactgtat cgatcccgga cggggcgtgc ccaccaggg
//
LOCUS       DAOKIP010000249         5026 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.250,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000249 DAOKIP010000000
VERSION     DAOKIP010000249.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 5026)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5026)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5026
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.250"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(62..1156)
                     /gene="rodA"
                     /locus_tag="QEL58_003597"
     CDS             complement(62..1156)
                     /gene="rodA"
                     /locus_tag="QEL58_003597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012481292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein RodA"
                     /protein_id="HDS1678025.1"
                     /translation="MEWKRLFGGCREAVRTIDLPLLVALLILMGAGLAVLHSVSGPVA
                     GQAARFAGGLLAMWLLSRVSLLRLRAWTPALYALSMLPLMAVYVIGTGKYGQRWLNLG
                     VFYLQPSELLKLSLPLMMAWYLHRQPLPPSPRTVLTAAVLIGVPAVLILMQPNLGTAT
                     LVTASGVFALLLAGLHWGWVATGATGLALAAPLAWFGLLRQYQKDRVLTFLDPAADPL
                     GTGWNILQSRIAIGSGGWQGRGWGQGTQATLDFLPEYTTDFAFSVLAEEFGWIGVATV
                     FALYLFVVGRCLWIAVHARDTHARLLAGSLGLAFFVYVLVNGGMISGLLPVVGIPMPL
                     ISYGGTSAVSLLAGIGLVMAVRGHRPVHGG"
     gene            complement(1299..2411)
                     /gene="rodA"
                     /locus_tag="QEL58_003598"
     CDS             complement(1299..2411)
                     /gene="rodA"
                     /locus_tag="QEL58_003598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005419392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein RodA"
                     /protein_id="HDS1678026.1"
                     /translation="MKVFLRWAGDMLRRFFSTLDWVLCLALGALMVIGLATLKSAGGD
                     SLVMAQGARFAVGMAALWGISRVPILRIRSATPMIYAISMIPLLAVFVLGTGKYGRQW
                     LDLKFFYLQPAELLKVSLPMMVAWYLHRMPLPPRFNTVLVALVIIGVPTGLVMLQPDF
                     GTGVLIAASGVFVLLLAGLPWWWVGLGVGGVAAVAPLAWFWLLRPYQKDRIMMFLDPE
                     MDALGAGWNIIQSKIAIGSGGFDGKGWGEGSQSHLNFIPEQTTDFAFSVLSEEFGWIG
                     VATVLALYLVVIGRCLWIASQSRDSYSRLLAGATGLAFFVYVLVNGGMISGLLPVVGV
                     PMPLISYGGTSAVSLLAGFGLVMAVRSHNPVHGGYG"
     gene            complement(2408..4495)
                     /gene="mrdA"
                     /locus_tag="QEL58_003599"
     CDS             complement(2408..4495)
                     /gene="mrdA"
                     /locus_tag="QEL58_003599"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014038520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 2"
                     /protein_id="HDS1678027.1"
                     /translation="MIPRRQVKNPHAEAEQFRRRAALGFLGVLVCLLGLGGWYFKLQV
                     LDHDVYATRSEANRIKPRPVVPGRGMIYDRNGRLLAENVPAFRLDVTPDKVKDMDATL
                     EGLAKIISISPEELEAFNKSRKARRKFLPVTLKLRMSDEEMARFAVDRWRFPGVELEP
                     YLTRRYPYGDLFAHIIGYVGRVDDKDLEILGEGNAALTHIGKSGLERYYEQQLRGKVG
                     YEQVETNVQGRAIRTIGRVAAQSGADLRLSIDADLQRAMVAAFGDQEGSAVAMDPRTG
                     EVLAMVSLPSYDPNLFVNGISHADFKALNENPSRPQFNRLVLGGVAPGSTLKPLIGLA
                     GLDSGVRRPEDKVLSTGMFYLPGTSRGWGDAHRGGHGWTDLRKSIAESVNTYYYKLAL
                     DLGIERFDHYMEYYGFGQPTGIDLTGEIGGILPSPAYKRKTRKEAWYPGDTVNISIGQ
                     GDWKVTPLQLARGVSALADGQLRTPHLVIQQRDGFDSDWAATSPGEIKPVSPNPSNLQ
                     AVREGMMATMRPGGSGWRVAVGAPYVMAGKTGTAQVISRKGTAAVNPKSLPMHLRHRA
                     LFVGFAPVENPVIAIAVAVEGGGYGGSAAAPIARKVFDAYLLGKMPEGMQPLDSERGT
                     TAIGATAFDNEDAGARQAGDLAAAQLAEHPVLVGVPAPEPAPAPAPAPPPGTPAAAAL
                     PATPRPTSAEPAR"
     gene            complement(4499..4984)
                     /gene="mreD"
                     /locus_tag="QEL58_003600"
     CDS             complement(4499..4984)
                     /gene="mreD"
                     /locus_tag="QEL58_003600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005911183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreD"
                     /protein_id="HDS1678028.1"
                     /translation="MSRLRDNPWVLPASLVVALLLGLLPLPALLQPLRPYWLALVLAY
                     WVIEAPERVGLGVAFASGVIADLLYGGVLGEQALRLVMLAFILQRFRARIRFFPMSQQ
                     MLAIGGLLFNDRIVSALVHILVGEPTLPWSYWWAPLLGMGLWPLVFVLLDAVRFGKRG
                     R"
BASE COUNT          888 a         1793 c         1657 g          688 t
ORIGIN      
        1 ccaattacat gacctgcgtt acgcgaccac ccacgagggg cggcgccgtt ggctggaacc
       61 cctatccccc gtgcaccggc cggtgcccgc gcaccgccat caccaacccg ataccggcca
      121 acagcgaaac cgccgatgtc ccgccatagc tgatcaacgg catcggaatg cccaccaccg
      181 gcagcaggcc ggaaatcatt ccaccattca ccaggacata gacgaagaac gccagcccca
      241 ggctgccggc cagcaaccgt gcgtgcgtgt cgcgcgcgtg caccgcgatc cacaggcagc
      301 gcccgaccac gaacaggtag agcgcgaaca ccgtcgccac accgatccat ccgaactctt
      361 cggccaacac tgaaaacgcg aagtcggtcg tgtactcggg caggaaatcc agcgtggcct
      421 gcgtgccctg cccccagccg cgaccctgcc agccaccgga gccaatcgcg atgcgcgact
      481 gcaggatgtt ccagccggtg ccgagggggt ccgccgccgg gtcgaggaag gtcagcacgc
      541 gatccttctg gtactgccgc agcaggccga accacgccag cggtgcggcc agcgccagcc
      601 cggtcgcgcc agtggcgacc cagccccaat gcaggccggc cagcaacaac gcaaacacgc
      661 cgctggcggt gaccagcgtg gcggtgccca ggttgggctg catcaggatc agtaccgcgg
      721 gaactccgat cagcaccgcg gcggtcagca ccgtgcgcgg cgacggcggc agtggttgcc
      781 ggtgcaggta ccaggccatc atcagcggca ggctgagctt gagcagctcg gacggttgca
      841 ggtagaacac acccaggttg agccagcgct gcccgtactt gccggtaccg atcacgtaca
      901 ccgccatcag cggcagcatc gacagcgcat acaacgccgg tgtccacgcg cgcaggcgca
      961 gcagcgaaac ccgcgacagc agccacatcg ccagcaggcc accggcaaag cgcgcggcct
     1021 gcccggccac cgggccggac acgctgtgca gcaccgccag gccggcgccc atcaggatca
     1081 acagcgcaac cagcaacggc aggtcgatcg tgcgcaccgc ctcacggcag ccgccaaaca
     1141 gtcgtttcca ttccacgcgg gcacggtagc aatgcgtgct tgcgtgaagc tgtcatgcgg
     1201 cagctgcatt tgtagagtcg agccgtgctc gactgccttt catgcagcaa cagaagcagt
     1261 cgagcaagct cgactctacg aaggcggcgg agccgggctc agccgtagcc gccgtgtacc
     1321 gggttgtggc tgcgcactgc catcaccagc ccgaagccgg ccagcagcga taccgccgaa
     1381 gtaccgccgt agctgatcag cggcatcggc acgcccacca ccggcagcag gccggaaatc
     1441 atcccgccgt tgaccagcac gtagacgaag aacgccaggc cggtggcgcc ggccagcagc
     1501 cgcgaatagg agtcgcgcga ctggctggcg atccacaggc agcgcccgat caccaccagg
     1561 tacagcgcca gcacggtggc cacgccgatc cagccgaatt cctcgctcag caccgagaac
     1621 gcgaagtcgg tggtctgctc gggaatgaag ttcaggtgcg actgcgagcc ctcgccccag
     1681 cccttgccgt cgaagccgcc ggaaccgatc gcgatcttcg actggatgat gttccagccc
     1741 gcgcccagcg catccatctc cgggtccagg aacatcatga tgcggtcctt ctggtacggc
     1801 cgcagcagcc agaaccaggc cagcggcgcg accgcggcca cgccgcccac gcccagcccg
     1861 acccaccacc acggcaggcc tgccagcaac agcacgaaca caccactggc ggcgatcagc
     1921 acgccggtcc cgaagtccgg ctgcagcatc accagcccgg tcggtacgcc gatgatgacc
     1981 agcgccacaa gcacggtgtt gaagcgcggc ggcagcggca tccggtgcag gtaccaggcc
     2041 accatcatcg gcaggctgac cttcagcagc tcggccggct gcaggtagaa gaacttcagg
     2101 tccagccact gccgtccgta tttgccggtg ccgagtacga acaccgccag cagcgggatc
     2161 atcgagatcg cgtagatcat cggcgtggct gagcggatgc gcaggatcgg cacccgcgag
     2221 atgccccaca gtgcggccat gcccaccgcg aaacgcgccc cctgggccat caccaggctg
     2281 tcgccaccgg cgctcttcaa ggtggccagg ccgatcacca tcaacgcgcc cagcgccagg
     2341 cacaacaccc agtccagcgt gctgaagaag cggcgcagca tgtcgccggc ccagcgcagg
     2401 aacaccttca tcgtgcgggc tccgcagagg tgggacgcgg cgtggccggc agcgcggcgg
     2461 cagccggtgt gcccggcggc ggtgccggag ccggcgcggg tgccggttcg ggcgcaggca
     2521 cgccgaccag caccgggtgc tcggccagct gcgcggcggc cagatcaccg gcctggcgcg
     2581 caccggcatc ttcgttgtcg aacgcggtgg cgccgatggc ggtggtgccg cgctcgctgt
     2641 ccagcggctg catgccttca ggcatcttgc ccagcaggta ggcgtcgaac accttgcgtg
     2701 cgatcggcgc ggccgccgaa ccaccgtagc cgccaccctc caccgccacc gcgatcgcga
     2761 tcaccgggtt ctcgaccggc gcgaagccga cgaacagcgc gcggtggcgc aggtgcatcg
     2821 gcaggctctt cggattcacg gcggccgtgc ccttgcggct gatgacctgc gcggtaccgg
     2881 tcttgccggc catcacgtac ggcgcaccca ccgccacgcg ccaaccgctg ccgccgggcc
     2941 gcatggtcgc catcatgccc tcacgcaccg cctgcaggtt gctggggttg gggctgaccg
     3001 gtttgatctc gccgggcgac gtcgccgccc agtcgctgtc gaagccgtcg cgctgctgga
     3061 tcaccaggtg cggggtgcgc aactggccgt cggccagcgc gctgacacca cgcgccagct
     3121 gcagcggggt gaccttccag tcgccctggc cgatgctgat gttgaccgta tcgccggggt
     3181 accaggcttc cttgcgggtc ttccgcttgt aagccggcga cggcaggatg ccaccgattt
     3241 cgccggtcag gtcgatgccg gtcggctggc caaagccgta gtactccatg tagtggtcga
     3301 agcgctcgat gcccaggtcc agcgccagct tgtagtagta ggtattgacc gactcggcga
     3361 tggacttgcg cagatcggtc cagccgtggc cgccgcggtg ggcgtcaccc cagccgcgcg
     3421 aggtgccggg caggtagaac atgccggtgg acagcacctt gtcttccggg cggcgcacgc
     3481 ccgaatccag gccggccagg ccgatcagcg gcttcaacgt ggaaccgggg gcgacgccac
     3541 cgagcaccag gcggttgaac tgcggccgcg acgggttctc gttcagcgcc ttgaagtcgg
     3601 catgcgagat gccgttgacg aacaggttgg ggtcgtagga cggcaggctg accatcgcca
     3661 gcacttcgcc ggtacgcggg tccatcgcca ccgccgagcc ttcctggtcg ccgaaggcgg
     3721 cgaccatggc gcgctgcagg tcggcgtcga tcgacagccg caggtcggca ccggactgcg
     3781 cggcgacgcg gccgatggtg cggatcgcac ggccctgcac gttggtttcg acctgctcgt
     3841 agccgacctt gccgcgcagc tgctgctcgt aatagcgctc caggccggac ttgccgatgt
     3901 gggtcagcgc cgcattgcct tcaccgagga tctccagatc cttgtcatcg acgcggccga
     3961 cgtagccgat gatgtgcgcg aacagatcgc cgtaggggta gcggcgggtc aggtagggct
     4021 ccagctcgac gccggggaag cgccagcggt cgacggcgaa gcgcgccatc tcctcgtcgc
     4081 tcatgcgcag cttcagcgtg accggcagga acttgcggcg cgccttgcgc gacttgttga
     4141 acgcttccag ttcttccggg ctgatgctga tgatcttcgc cagcccttcg agggtggcgt
     4201 ccatgtcctt gaccttgtcc ggggtcacgt ccaggcggaa ggccggtacg ttctcggcca
     4261 gcaggcggcc gttgcggtcg tagatcatgc cgcgcccggg caccaccggc cgcggcttga
     4321 tgcggttggc ctccgagcgc gtggcataga catcgtggtc cagcacctgc agcttgaagt
     4381 accagccgcc caggcccagc aggcagacca gcacgcccag gaaacccagc gccgcgcgac
     4441 ggcggaactg ttcggcttcg gcgtgcgggt tcttgacctg gcggcgcgga atcatggctc
     4501 agcgcccgcg cttgccgaag cgcaccgcgt ccagcagcac gaacaccagc ggccacaggc
     4561 ccatgcccag cagcggcgcc caccagtacg accacggcag cgtcggctcg cccaccagga
     4621 tgtggaccag cgcgctgacg atgcggtcgt tgaacagcag gccgccgatg gccagcatct
     4681 gctgcgacat cgggaagaag cggatgcggg cacggaagcg ctgcaggatg aaggccagca
     4741 tcaccagtcg cagcgcctgt tcaccgagca cgccgccgta cagcaggtcg gcgatcacgc
     4801 cactggcgaa ggcgacgccc aggccgacgc gttcgggcgc ttcgatcacc cagtacgcca
     4861 gtaccagcgc cagccagtac gggcgcagcg gctgcagcag cgccggcagc ggcagcaggc
     4921 ccagcagcag cgccaccacc aggctggccg gcagcaccca cgggttgtcg cgcaggcggc
     4981 tcatcgttgg gcctccggcg tggtcggttg ccggccagcg gccggc
//
LOCUS       DAOKIP010000250         4958 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.251,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000250 DAOKIP010000000
VERSION     DAOKIP010000250.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 4958)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4958)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4958
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.251"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(19..1668)
                     /locus_tag="QEL58_003601"
     CDS             complement(19..1668)
                     /locus_tag="QEL58_003601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003489719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M28 family peptidase"
                     /protein_id="HDS1678029.1"
                     /translation="MKRVVLGVLALSVSSALMAATPKFDGARISADVKELASDAYEGR
                     SPATAGEEKTVAYLSKQFADAGLQPGGDLKDGKRLWTQAVPLRKGDIVGAPQLALHQG
                     SKTLPLEQGKQIAVRAAMNGASNVDISKAPLVFLGYGVKAPERNWDDFKGVDLKGKIA
                     VVLINDPDFETGQGDFDGKGMTYYGRWTYKYEEGARQGALGVLIVHETAPASYGWATV
                     AGSNTNTMFDVVRDNPAESHPLLEGWIQRDLAVELFRSAGQDFDALKKKAQQRDFTPV
                     PLTGASLDAKYAVKTEVITSHNVAARLEGSRHPDETIIYSAHWDHIGVGEPDARGDRI
                     FNGALDNASGTASLVELARGFAKAKRPQRSVLFLAVTAEEKGLLGSEYYATHPLYPLE
                     KTVAVINMDGMAPFGPSRDFGIYGAARFELLDQLKDVAKGWDIRYTPDPKPEAGLFFR
                     SDHFPFAKRGVPALSWSAGQDWVDGGVAAGKKASEDYTAKRYHQQGDEWQPDWVFAGA
                     ARDLEVLYTLGDQLANSRSWPNWSKDESFRAVRDASADQRK"
     gene            complement(1778..3064)
                     /locus_tag="QEL58_003602"
     CDS             complement(1778..3064)
                     /locus_tag="QEL58_003602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HDS1678030.1"
                     /translation="MPDPALTQRFETLWRMESPVLIARLARLLGGDVGRAEELAQDTW
                     LAALERWPEQGIPDNPGAWLMTTARNRAIDVLRQHQRVAQQHAQWGEELHPAALPAPD
                     DSQALEDDLGDDLLRLMFVACHPVLPADARVALTLRLLGGLTTTEIARGFLQPEPTIA
                     QRIVRAKRTLAQKQVPYEVPRAEAMPERLASVLEAIYLVFNEGYAASAGDDWMRPALC
                     EEALRLARILAHRLPVPPVLGLLALMELQASRAAARTDAQGTPVLLDQQNRARWDWLQ
                     IERGQQALARALAAGGGQDPYVLQARIAACHAAARRAEDTDWARIAALYAQLLQVMPS
                     PVVALNRVVAVSRSDGAFAAWALLQPLLADARLQGYAPLQVVRGDLLQQLGRADDARA
                     AFAAAAALTGNARERELLLLRAQRSGSALSSDRNGI"
     gene            complement(3110..3466)
                     /locus_tag="QEL58_003603"
     CDS             complement(3110..3466)
                     /locus_tag="QEL58_003603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005407889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1428 domain-containing protein"
                     /protein_id="HDS1678031.1"
                     /translation="MAYVDAYVLPCPQDRVAAYRRLARKAGAVWKEHGALQYMECVAD
                     DVEPGKSTSFPRAVKAKPGETVIVAFVVFRSRAARDRINAKVMADPRLASLGPKDMPF
                     DTRRMFWGGFKPIVEA"
     gene            complement(3490..3900)
                     /locus_tag="QEL58_003604"
     CDS             complement(3490..3900)
                     /locus_tag="QEL58_003604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019337984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HDS1678032.1"
                     /translation="MSAPQPQMIFVNLPVQDLQASKAFFAALGYSFNPTFTNDDAACM
                     VISESIFVMLLTQPFFKQFTNKAIADAHSHTEVITCLSADSRTAVDAMVDKALAAGAS
                     EPQPARDYGFMYQRGFQDLDGHLWEIAHMDGEPG"
     gene            complement(3935..4357)
                     /locus_tag="QEL58_003605"
     CDS             complement(3935..4357)
                     /locus_tag="QEL58_003605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005407887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HDS1678033.1"
                     /translation="MRLIPFLGFSGQAHDAMAFYAKALGGQVTSEMKYRDMPPSDGSP
                     GCNEMPPETLDHVAHSQLEIGNAIVMAADGPGGGEGGSTTINVDVDSIEEAERVFAAL
                     AEGGQVQMPIAETFWAHRWGMLIDRYGKPWMVNCMKQP"
     gene            complement(4421..4834)
                     /locus_tag="QEL58_003606"
     CDS             complement(4421..4834)
                     /locus_tag="QEL58_003606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010484147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HDS1678034.1"
                     /translation="MKVMVIVKANADSEAGRMPSQQELSEMGAFNEQLVAAGIMLAGE
                     GLHATQRGRRIHFGGTAPTVEAGPFGPASEQIAGFWLWDVRSLDEAVEWASRAPFGSG
                     GTLELRPLISAEDFGEAFTPDLQQQEQRLRAQLEG"
BASE COUNT          774 a         1714 c         1621 g          849 t
ORIGIN      
        1 cgaacccggc gccctccctt acttgcgctg gtcggcgctg gcgtcacgca cggcgcggaa
       61 cgactcatcc ttgctccagt tcggccagct gcgcgagttg gccagctggt cgcccagggt
      121 gtacagcact tccaggtcgc gggcagcacc ggcgaacacc cagtccggct gccattcgtc
      181 gccctgctgg tggtagcgct tggcggtgta gtcttccgag gccttcttgc ccgcggccac
      241 gccgccgtcc acccagtcct ggccggccga ccacgacagc gccggcacgc cgcgcttggc
      301 gaacgggaag tgatcggaac ggaagaacag gcctgcttcc ggcttcgggt ccggggtgta
      361 gcggatgtcc cagcccttgg ccacgtcctt cagctggtcc agcagctcga agcgcgccgc
      421 accgtagatg ccgaaatcac gcgacgggcc gaacggcgcc atgccgtcca tgttgatcac
      481 cgccacggtc ttttccagcg ggtacagcgg atgggtggcg tagtactccg aacccagcag
      541 gcccttctcc tcggcggtga ccgccaggaa cagcaccgaa cgctgcgggc gcttggcctt
      601 ggcgaagccg cgcgccagct cgaccagcga ggcggtaccg ctggcattgt ccagggcgcc
      661 gttgaagatg cggtcaccgc gcgcatccgg ctcgcccaca ccgatgtggt cccagtgcgc
      721 gctgtagatg atcgtctcgt ccggatggcg gctgccttcc aggcgcgcgg ccacattgtg
      781 cgaggtgatc acttcggtct tcaccgcgta cttcgcatcc aggctggcgc cggtcagcgg
      841 caccggggtg aagtcgcgct gctgcgcctt cttcttcagc gcatcgaagt cctgcccggc
      901 cgagcggaac agctccacgg ccaggtcgcg ctggatccag ccttccagca gcggatggct
      961 ctcggccggg ttgtcacgca ccacgtcgaa catggtgttg gtgttggagc cggccacggt
     1021 ggcccagccg tacgaagccg gcgcggtctc gtgcacgatc agcacgccca gcgcgccctg
     1081 acgggcgccc tcctcgtact tgtaggtcca acgaccgtaa taggtcatgc ccttgccgtc
     1141 gaagtcgccc tgcccggtct cgaagtccgg gtcgttgatc agcaccacgg cgatcttgcc
     1201 cttcaggtcg acgcccttga agtcgtccca gttgcgctcc ggtgccttca cgccataacc
     1261 gaggaacacc agcggcgcct tgctgatatc aacgttgctg gcgccattca tcgcggcacg
     1321 cacggcgatc tgcttgccct gttccagcgg cagggtcttg ctgccctggt gcagggccag
     1381 ctgcggtgcg ccgacgatgt cgcccttgcg cagcggcacg gcctgggtcc acaggcgctt
     1441 gccgtccttg aggtcgccgc cgggctgcag gccggcatcg gcgaactgct tgctgaggta
     1501 ggcgacggtc ttctcttcgc cggcggtggc cggcgagcgg ccctcgtagg cgtcggaggc
     1561 cagttccttg acgtcggcgg agatccgcgc gccgtcgaat ttcggcgtgg ccgccatcag
     1621 tgcgctcgac accgacaggg ccagcacgcc cagtactact cgtttcattg ctctctccag
     1681 cagggaaatc tctctggagt gtaatgggat tcggcagcgc tgcgccccgc ctttggtagg
     1741 tgtcgacctt ggtcgacacg ccacgccatg catggggtca gatcccgttc ctgtcggaag
     1801 agagcgctga ccccgatcgc tgggcgcgca acagcagcag ctcgcgctcg cgggcgttgc
     1861 cggtcagcgc ggcggcggcg gcgaaggccg cgcgcgcgtc atcggcccgg cccagctgct
     1921 gcagcaggtc accacgcacc acctgcaagg gcgcatagcc ctgcaaccgc gcatcggcca
     1981 gcaaaggttg caacagcgcc caggccgcaa acgcgccgtc gctgcgcgac accgccacca
     2041 cccggttgag ggccacgacc ggcgacggca tcacctgcag caactgcgca tacagtgcag
     2101 cgatgcgcgc ccagtcggta tcttcggcgc ggcgtgcggc ggcatgacag gccgcgatgc
     2161 gcgcctgcag cacgtacggg tcctggccgc caccggccgc cagtgcgcgt gccagtgcct
     2221 gctggccgcg ctcgatctgc agccagtccc agcgtgcgcg gttctgctgg tccagcagca
     2281 cgggcgtacc ctgcgcatcg gtccgcgcgg ccgcgcgcga ggcctgcagt tccatcaacg
     2341 ccagcaggcc cagcaccggc ggcaccggca accggtgcgc caggatgcgc gccagccgca
     2401 gcgcttcctc gcacagtgcc gggcgcatcc agtcatcacc ggcactggcc gcatagcctt
     2461 cgttgaacac cagatagatc gcctccagca ccgaggccaa gcgctcaggc atcgcctccg
     2521 cgcgcggcac ttcgtagggc acctgcttct gcgccagggt gcgcttggcg cgcacgatgc
     2581 gctgggcgat ggtcggttcc ggctgcagga agccgcgggc gatctcggtg gtggtcaggc
     2641 cgccgagcag gcgcagggtc agcgcgaccc gcgcatcggc gggcagcacc ggatggcagg
     2701 ccacgaacat cagccgcagc agatcgtcac ccaggtcatc ttccagcgcc tggctgtcat
     2761 ccggtgccgg aagcgccgcc ggatgcagtt cctcgcccca ctgcgcatgc tgctgcgcca
     2821 cccgctggtg ctggcgcagc acatcgatgg cacggttgcg cgcagtggtc atcagccagg
     2881 ctccggggtt gtccgggatg ccctgctccg gccagcgctc cagcgcggcc agccaggtgt
     2941 cctgggccag ctcctcggcg cgacccacat cgcccccgag caaccgcgcc aggcgcgcga
     3001 tcaacaccgg cgactccatc cgccagaggg tttcaaagcg ctgcgtcagt gcgggatcag
     3061 gcatgcagcg atcacagcac gcacgcccgg cccgcacaag cgccgtggct cacgcttcaa
     3121 cgatgggctt gaagccgccc cagaacatgc gccgggtatc gaacggcatg tccttcgggc
     3181 ccagcgacgc cagcctaggg tcggccatca cctttgcgtt gatgcggtcg cgcgccgccc
     3241 gagagcggaa caccacgaag gccacgatca ccgtttcacc gggtttggcc ttgaccgcac
     3301 gcgggaacga ggtgctcttg cccggttcca catcgtcggc cacgcattcc atgtactgca
     3361 gcgcgccatg ctccttccac accgcaccgg ccttgcgggc aaggcggcgg taggccgcca
     3421 ccctgtcctg cgggcacggc agcacgtaag catccacgta agccatgagg gttctccctg
     3481 cggcggccgt cagcccggct cgccgtccat gtgcgcgatt tcccagagat ggccatccag
     3541 gtcctggaaa ccgcgctggt acatgaagcc atagtcacgt gccggctgcg gttcactggc
     3601 gccggccgcg agtgccttgt ccaccatcgc gtccaccgcc gtgcggctgt cggccgacag
     3661 gcaggtgatc acctcggtgt gactgtgcgc atcggcaatc gccttgttgg tgaactgctt
     3721 gaagaacggc tgcgtcagca gcatcacgaa gatgctctcg ctgatcacca tgcaggccgc
     3781 atcgtcattg gtgaaggtcg ggttgaagct gtagcccaac gcggcgaaga aggccttgga
     3841 cgcctgcagg tcctgcacgg gcaggttgac gaagatcatc tgtggttgcg gtgcactcat
     3901 cggtaaagct ccttgtggat gaaagtgaga cggatcaggg ctgcttcatg cagttgacca
     3961 tccacggctt gccgtagcgg tcgatcagca tgccccagcg atgcgcccag aacgtttcgg
     4021 caatcggcat ctgcacctgg ccaccttcgg ccagcgcggc gaacacgcgc tcggcttctt
     4081 cgatactgtc gacgtcgaca ttgatggtgg tcgagccacc ctcgccaccg ccggggccgt
     4141 cggccgccat cacgatggcg ttgccgatct ccagctggct gtgcgcgacg tggtccaggg
     4201 tttccggcgg catctcgttg caacccggcg agccatcgga tggcggcatg tcgcggtact
     4261 tcatctccga agtaacctgg ccaccgagtg ccttggcata gaacgccatc gcatcgtggg
     4321 cctggccgct gaagccgagg aagggaatca gtctcatggc attgctccgt tgattgatac
     4381 agggtgttgc caggccgcgc ccggcgtgga gtgagtcggg tcagccttcc agctgtgcac
     4441 gcagacgctg ttcctgctgc tgtaagtcgg gggtgaaggc ttcaccgaag tcttcggcgg
     4501 agatcagggg gcgcagttcc agcgtgccgc cgctgccgaa cggcgcacgg ctggcccact
     4561 cgacggcctc gtccagcgag cgcacgtccc acagccagaa cccggcgatc tgttcgctgg
     4621 cgggaccgaa tggaccggcc tcgaccgtgg gtgccgtgcc accgaagtga atgcgacgac
     4681 cacgctgggt ggcgtgcagg ccttcaccgg ccagcatgat gccggcggcc accagttgtt
     4741 cgttgaaggc gcccatttcg gacagctcct gctggctggg catgcggccg gcttcggagt
     4801 cggcgttggc cttcacgatc accatcactt tcattgcggt ctcccgtggg gacgcgtggt
     4861 gcgtgccctt cactgggtac aacgaaccag ggcgatggga atcgacacgt cttctgaaaa
     4921 ttatttcttc ggcgggaagc gcgccttcgg cgggagtc
//
LOCUS       DAOKIP010000251         4945 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.252,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000251 DAOKIP010000000
VERSION     DAOKIP010000251.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 4945)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4945)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4945
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.252"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..1024)
                     /locus_tag="QEL58_003607"
     CDS             complement(<1..1024)
                     /locus_tag="QEL58_003607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005417804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent oxidoreductase"
                     /protein_id="HDS1678035.1"
                     /translation="MSDSPTTSRIVLASRPQGAPSAANFRLEQAALPALAEGEVLLRN
                     RYLSLDPYMRGRMDEGPSYAAPVAVGAVMEGQTVAEVLQSNAEGVATGELVLAPGGWQ
                     THAVLPARALGRRLDPAGLPLSTALGVYGMPGFTAYSSLHEIARLKPGETLVVAAATG
                     PVGATVAQLAKLQGARVVAIAGGEAKRTYLQALGVDVALDHRAADFAAQLRAAVPAGI
                     DVYFENVGGHVLDAVLPLLNDFARIPVCGTIATYNDRGIEQPGPDRLPALFSQILRQR
                     LTVRGFIVHDFNHLWPDFEREMPQWLREGRIQYREDVVDGLENAPEAFFGLLKGRNFG
                     KLVVKLD"
     gene            1360..1435
                     /locus_tag="QEL58_003608"
     tRNA            1360..1435
                     /locus_tag="QEL58_003608"
                     /product="tRNA-Phe"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1393..1395,aa:Phe,seq:gaa)
     gene            1508..1583
                     /locus_tag="QEL58_003609"
     tRNA            1508..1583
                     /locus_tag="QEL58_003609"
                     /product="tRNA-Phe"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1541..1543,aa:Phe,seq:gaa)
     gene            1740..2291
                     /locus_tag="QEL58_003610"
     CDS             1740..2291
                     /locus_tag="QEL58_003610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012511677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipocalin family protein"
                     /protein_id="HDS1678036.1"
                     /translation="MHLRPALLACLLLAAAPVLAVEPVRAVDTLDIDRYAGQWHEIAH
                     LPVSFQKQCVGEITANYGLRRDGRISVTNACRNGEGERVVAEGVARPVPGHPGQLQVR
                     FVPDWLSWVPLVWADYWVLALDPDYQWALVGEPGRKYLWILSRVPEMERARFEQLKAT
                     AESMGYDLGPLRQMAPLREPPAD"
     gene            2456..2932
                     /locus_tag="QEL58_003611"
     CDS             2456..2932
                     /locus_tag="QEL58_003611"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="LEA type 2 family protein"
                     /protein_id="HDS1678037.1"
                     /translation="MLHRFRIALIVLCTLALVACNNGIVKRVSEPAASLQQLTVRADG
                     NWTVALRLQNFSSMPMTFDDVSLALTVGDSEAGTLQARPGISIGGTSADVINVDLVPS
                     SAARLIVADALAGNRTLAYGLKGTVAATPQEKKQRSFDISSRSTLNQAPGLPGVLR"
     gene            2997..4787
                     /locus_tag="QEL58_003612"
     CDS             2997..4787
                     /locus_tag="QEL58_003612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase C-terminal
                     domain-containing protein"
                     /protein_id="HDS1678038.1"
                     /translation="MSSYTAPLSDLRFALHDVLKVEPLFARLGFTDATADVVDAVLEE
                     AGRFSATVLAPLNSVGDEIGCVLDQATGEVTTPPGFKQAYDQFVDGGWTGLTASPDLG
                     GQGLPHTLGVPLNEMINAANLAWGNFPLLSHGAIEALKQHGEAWQHEAFLKPLIEGRW
                     TGTMCLTEPHCGTDLGLLKTKAEPNADGSYSITGTKIFITAGEHDLTGNIVHLVLAKL
                     PDAPAGAKGISLFVTPKFKVDRDGNVGERNALRCGSIEHKMGIKGSVTCVMNFDGAQG
                     YLVGQPHKGLQAMFTMMNTARLGVGLQGIGLSERAYQNALKYSRERLQSRALSGAKFP
                     DKPADPILVHPDVRRMLLTVKSLVEGSRLLALHAATLIDVAHHAEDAAERERADTLVS
                     FLTPISKACQTEWGIENTYNALQCFGGHGYIREHGMEQLARDARITTLYEGTTGIQAL
                     DLIGRKTASSQGAGLKLMLAEIEAFAKEHEGNEALAEFIGPLRAKAAEWGALTMDVLK
                     RAAANPDELGAASYDYLFYSGYVVLAYWWARSVAAADASAHGAAFAQGKRETARFYFA
                     RVLPRTLSHAAAIQAGAAPLMAMDDERFGA"
BASE COUNT          869 a         1768 c         1528 g          780 t
ORIGIN      
        1 agtccagctt caccaccagc ttgccgaagt tgcgcccctt cagcagtccg aagaaggctt
       61 ccggcgcatt ctccagtccg tccaccacat cctcacggta ctggatacgg ccctcgcgca
      121 gccattgcgg catctcacgt tcgaagtccg gccacaggtg attgaagtcg tgcacgatga
      181 aaccccgcac ggtcaggcgc tggcgcagga tctggctgaa cagtgccggc agccggtccg
      241 ggccgggttg ctcgatgccg cgatcgttat aggtggcgat ggtgccgcac accggaatgc
      301 gggcgaagtc attgagcagc ggcagtaccg catccagcac gtgccctccc acattctcga
      361 agtacacatc gatgccggcg ggcaccgcgg cgcgcagctg cgcggcgaaa tcagcggcgc
      421 gatgatccag cgccacgtcc acgcccagtg cctgcagata ggtgcgcttg gcttcgccac
      481 cggcaatggc gaccacgcgc gcgccctgca gcttcgccag ctgggccacg gtggcgccca
      541 ccgggcccgt ggcggcagcg accaccagcg tctcacccgg tttcaggcgg gcgatttcat
      601 gcaggctgga atacgcagtg aaccccggca tgccgtacac gcccagcgcc gtgctcaacg
      661 gcaacccggc cggatcgagg cgacgcccga gtgccctggc cggcagcacc gcgtgggtct
      721 gccagccacc cggcgccagc accagctcac ctgtggctac gccctcggcg ttggactgca
      781 gcacctccgc cacagtctgg ccttccatca ccgcacccac ggccaccggc gccgcatacg
      841 aaggaccctc gtccatgcgt ccacgcatgt acgggtccag cgacaggtag cgattgcgca
      901 gcagcacctc tccttccgcc aatgccggca gtgcggcctg ctccaggcgg aagttcgccg
      961 cgctcggtgc gccctgcgga cgcgaggcca gcacgatgcg ggacgtggtt ggggaatcgg
     1021 acatggcggc ggtctctgct gtggccagca tcgggaaagg actgccgaca ctacgccgca
     1081 gcgaccgccc gtggcggcca cgaaaacagc gttccattgc ccggacccgt gcgcgtccgg
     1141 cgcacccctt gtccttgcag ctttagcgat cgcggcgacc tgctgaattc caccgcagac
     1201 gatgatcgat tggcccgccc cgcccccaca acggaggatc aagcacttgc gagcgcgcag
     1261 acggcaatgt gaagaattct tggcaaaacc cttgccgaag acaaccgacc tccgtaatat
     1321 acgcctcctt ggcagcgacc tcgctgcaac gaaacatgtg gccgagtagc tcagttggta
     1381 gagcagggga ttgaaaatcc ccgtgtcggc ggttcgattc cgtcttcggc caccactttc
     1441 gaaggcctgc agaaatgcag gtcttttttt ccggaaatcg caggtgatcg cgattgccac
     1501 acaatttggc cgagtagctc agttggtaga gcaggggatt gaaaatcccc gtgtcggcgg
     1561 ttcgattccg tcttcggcca ccatcttcaa agacctgcag aaatgcaggt ctttttttgt
     1621 cttcgatttc cttccatgca acgtgcccgc atggggacgc cagcgctgga ttgacgaaac
     1681 atttacacgc ggcacgcgcc gccgcaccta cgctccagat tcctgcctgg agcctgtcga
     1741 tgcacctgcg ccccgccctg ctcgcttgcc tgctgctggc cgccgccccg gtgctcgccg
     1801 tcgagccggt gcgcgcggtc gataccctgg acatcgatcg ctatgccggc caatggcacg
     1861 agatcgcgca cctgccggtc tcgttccaga agcaatgcgt cggcgagatc accgccaact
     1921 acgggctgcg ccgcgacggc cggatcagcg tcaccaatgc ctgccgcaac ggcgaaggcg
     1981 agcgcgtggt tgccgaaggc gtggcgcgcc cggtacccgg ccaccccggc caactgcagg
     2041 tgcgcttcgt gccggactgg ctgagctggg taccgctggt ctgggccgat tactgggtgc
     2101 tggcgctgga cccggactac cagtgggccc tggtcggcga acccggtcgc aaatacctgt
     2161 ggattctctc gcgcgtgccg gaaatggagc gcgcgcggtt cgaacagctc aaggcaacgg
     2221 ccgaatccat gggctacgac ctcggcccgc tgcgccagat ggcaccgctg cgcgaaccgc
     2281 ctgccgattg aaccgcggcg cgagccgcgc acccgacgtg gacgatccgg cgccgcgcac
     2341 gcccggccgc catcttcacg cgctaccctc tgcggcgggt cgtcaccggc gatccaaaca
     2401 accatacgcc gtagtatgct tatcccaacg caccccctcc agaggacttg cgcccatgct
     2461 ccaccgtttc cgtatcgcct tgatcgttct gtgcaccctc gcccttgttg cctgcaacaa
     2521 cggcatcgtc aagcgtgttt cggaaccggc ggccagcctg cagcaactga ccgtgcgcgc
     2581 cgatggcaac tggaccgtgg ccctgcgcct gcagaacttc agctccatgc cgatgacctt
     2641 cgatgacgtt tcgctggcat tgaccgtggg cgacagcgaa gccggcaccc tgcaggccag
     2701 gccgggcatt tccattggcg gcacctcggc cgacgtcatc aatgtcgacc ttgtgcccag
     2761 ctcggccgcg cgcctgatcg tggccgacgc gctggccggc aaccgcaccc tggcctacgg
     2821 cctgaaggga acggtggccg ccacgccgca ggaaaagaag cagcgcagct tcgacatcag
     2881 cagccgcagc accctcaacc aggcccccgg cctgcctggc gtactgcgct gaatccccgc
     2941 ttccgccgcg gcgcccggcg ccgctcccct gcccctgatc aaatcgagac gtaccgatga
     3001 gcagctacac cgccccgctt tccgacctcc gtttcgccct gcacgacgtg ctcaaggtcg
     3061 aacccctgtt cgcccgcctg ggcttcaccg acgccaccgc cgacgtggtc gatgccgtgc
     3121 tggaagaagc cgggcgcttc agcgccaccg tgctggcccc gctcaacagc gtgggtgacg
     3181 agatcggctg cgtgctcgac caggccaccg gtgaggtgac cacgccgccc ggcttcaagc
     3241 aggcctacga ccagttcgtc gatggcggct ggaccggcct gaccgcttcg ccggacctgg
     3301 gtggccaggg cctgccgcat accctgggcg taccgctcaa cgaaatgatc aacgccgcca
     3361 acctggcatg gggcaacttc ccgctgctct cgcacggcgc catcgaagca ctgaagcagc
     3421 atggcgaagc gtggcagcac gaggccttcc tcaagccgct gatcgaaggc cgctggaccg
     3481 gcaccatgtg cctgaccgaa ccgcattgcg gcaccgacct gggcctgctc aagaccaagg
     3541 ccgaaccgaa cgccgacggc agctactcca tcaccggcac caagatcttc atcaccgccg
     3601 gcgagcacga cctgactggc aacatcgtgc acctggtgct ggccaagctg cccgacgccc
     3661 ctgcgggcgc caagggcatc tcgctgttcg tcacccccaa gttcaaggtc gaccgcgacg
     3721 gcaacgtcgg cgagcgcaac gcgctgcgct gcggctcgat cgagcacaag atgggcatca
     3781 agggctcggt cacctgcgtg atgaacttcg atggcgcgca gggctacctg gtcggccagc
     3841 cgcacaaggg cctgcaggcg atgttcacca tgatgaacac cgcacgcctg ggcgtcggcc
     3901 tgcagggcat cggcctgtcc gagcgtgcct accagaacgc gctgaagtac agccgtgagc
     3961 gcctgcagtc gcgtgcactc agtggcgcca agttcccgga caagccggcc gacccgatcc
     4021 tggttcaccc ggacgtgcgc cgcatgctgc tgacggtgaa gtcgctggtc gaaggcagcc
     4081 gcctgctggc cctgcacgcg gccaccctga tcgacgtggc ccaccacgcc gaggacgccg
     4141 ccgagcgcga gcgcgccgac accctggtca gcttcctcac gcccatctcg aaggcctgcc
     4201 agaccgaatg gggcatcgag aacacctaca acgccctgca gtgctttggg ggccacggct
     4261 acatccgcga acacggcatg gaacagctgg cccgcgatgc gcgcatcacc acgctgtatg
     4321 aaggcaccac cggcatccag gcgctggacc tgatcgggcg caagaccgcg tccagccagg
     4381 gcgccggcct gaagctgatg ctggccgaga tcgaagcctt cgccaaggaa catgaaggca
     4441 acgaggcgct ggccgagttc atcggcccgc tgcgcgccaa ggccgccgag tggggcgcac
     4501 tgacgatgga cgtgctgaag cgcgcggccg ccaacccgga cgaactgggt gcggccagct
     4561 acgactacct gttctattcg ggttacgtgg tgctggccta ctggtgggcc cgcagcgtgg
     4621 ccgccgccga tgccagcgcg cacggcgccg ccttcgccca gggcaagcgc gagaccgctc
     4681 ggttctactt cgcccgggtg ctgccgcgca cgctcagcca cgccgccgcg atccaggccg
     4741 gcgccgcccc gctgatggcg atggacgacg agcgcttcgg cgcctgagcc catcccacca
     4801 gtagatccac gccatgcgtg gatgaggggt ctgagacctt tcctgcggaa atggatccga
     4861 ccgcgacctg gcgaccctcg atcatctctc tggagaaaag cccccttttg ttaaaggggg
     4921 cgcgccgaca ggcgcgggga ttagg
//
LOCUS       DAOKIP010000252         4932 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.253,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000252 DAOKIP010000000
VERSION     DAOKIP010000252.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 4932)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4932)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4932
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.253"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(7..657)
                     /locus_tag="QEL58_003613"
     CDS             complement(7..657)
                     /locus_tag="QEL58_003613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012511420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HDS1678039.1"
                     /translation="MMMLDASTLAAQLRHPHGDAAQAVAESMNRSNGALNRAAIGLLA
                     VTSGERVLEIGPGNAAFAPLLLQASDSRYLGIELSSAMVEAGNRQLVAAGLAERAGMR
                     YGDAHALPIADAAMDAALAVNTLYFWPDLAPVLGELARVVRPGGRLCLAFGDAAFMRS
                     LPFTADFQLHELDAVELALRVAGFGVSAWRSHRETAPGNDGQAREKHFHLLLAQRR"
     gene            1003..1617
                     /locus_tag="QEL58_003614"
     CDS             1003..1617
                     /locus_tag="QEL58_003614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylcholine/phosphatidylserine synthase"
                     /protein_id="HDS1678040.1"
                     /translation="MKRHFSMLREFQLADWFTLANAFCGTGAVFAAMRFLQDGERGYL
                     MFGMALIPLAFIFDALDGRIARWRKSSSTLGRELDSLSDVISFGVAPAALAYACGMQG
                     GWDWLVLSYFVCCGVSRLARYNVTAEAMTGDEGKVTYFEGTPIPTSLVLVIVLAIAAG
                     TGAIGQEIWFGQWQIGPWQLHPMVLLFALSGSLMISKTLRIPKP"
     gene            1640..2734
                     /gene="phaE"
                     /locus_tag="QEL58_003615"
     CDS             1640..2734
                     /gene="phaE"
                     /locus_tag="QEL58_003615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005413814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class III poly(R)-hydroxyalkanoic acid synthase
                     subunit PhaE"
                     /protein_id="HDS1678041.1"
                     /translation="MTSSAHDAGSSDFEALARQYFGAWGDALRHAATPGAPAGDGPGS
                     WQRLFDEWGQLLPEQGPGAPEDAVRRFREQAGSWYGTMQDVAARFAGRDASSADVAQA
                     WREAVQGQGDGMLQWMLQGARGSTHAGAAVPEFASWLQQFQLQAGPWLQSPAFGPGRE
                     HQARWQALLRAQEEYQQHSRAYVEQIKQALDEAFALFEQRLAQHEQPGSQLTSARAMF
                     DLWIEVAEEAYAKVAMSEPFQQVYASLGNAQMRLRACLQREVEQMSERVGLPTRSEMD
                     AAHRRIAELERSLRRLQAQVAVLAGTATVDPVAQPAPAKVKPAARKAVKKAAPANKAA
                     PSKAPAKKVPARKAPAKKAAARTSSRTRDR"
     gene            2731..3798
                     /locus_tag="QEL58_003616"
     CDS             2731..3798
                     /locus_tag="QEL58_003616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class III poly(R)-hydroxyalkanoic acid synthase
                     subunit PhaC"
                     /protein_id="HDS1678042.1"
                     /translation="MKGPLGFNADDLMQETLAMQRKLLEGLTLLPQVEDVDYGVTARE
                     EVWRDGKVVLYRFVGEQAPTRRTPLLIVYALVNRPYMVDLQADRSLVQKLLALGQDVY
                     VLDWGYPDRSERFQTLEDYLLRYIDGAVDVLRQRSGGPVDLLGICQGGVFALCYAALR
                     RHKLGKLITMVTPVDFQTADNMLSHWARQVDVDLLVDTLGNIPADLMNASYLMLKPFR
                     LNVQKYVGLLDILDDKAALEDFLRMEKWIFDSPDLAGEAFREFIKQFYQGNGLVNGTV
                     RIGEEAVDLSQVTLPVLNIYAEQDHLVPPDASRAMRGHLGTEDYTESSFRGGHIGIYV
                     SGRAQREVPATIDGWLKARDL"
     gene            3832..4200
                     /locus_tag="QEL58_003617"
     CDS             3832..4200
                     /locus_tag="QEL58_003617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012480613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfeK family protein"
                     /protein_id="HDS1678043.1"
                     /translation="MTYRISLILAALLAAPLADAAPGPQAQREIAQLISSLDGSQCRF
                     QRNGSWYDGSDARAHLQRKYDYLLKKDMVDSAEQFIERAASQSSMSGKPYRIQCPGQP
                     EQTAAAWFGARLQALRQRAP"
     gene            4267..4470
                     /locus_tag="QEL58_003618"
     CDS             4267..4470
                     /locus_tag="QEL58_003618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003482814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PspC domain-containing protein"
                     /protein_id="HDS1678044.1"
                     /translation="MNTTPRTLSRSLNDRMIAGVMGGIAHRFGWNATLVRIVFVLVSI
                     GSAAFPGILVYLILWLLIPNEAD"
     gene            4467..4919
                     /locus_tag="QEL58_003619"
     CDS             4467..4919
                     /locus_tag="QEL58_003619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1678045.1"
                     /translation="MNATSRPWPLWLRALQVLGAVWTLPNTLIGLIGGLAGLLGGATL
                     RWSARDCALIFDHWPWGPGGAITLGNVILHTGHDLGMSCRTYAHQAGWGVEPLIRLDD
                     HERAHVYQYLVLGPLYLPVYLLCGGVSARNPFERAADHYARFGQGWWP"
BASE COUNT          794 a         1594 c         1736 g          808 t
ORIGIN      
        1 tccggttcag cgccgctgtg ccagcagcag atggaagtgc ttttcgcggg cctggccatc
       61 gttgccgggc gcggtttcgc ggtggctgcg ccaggcagaa acgccgaacc cggcgacacg
      121 cagcgccagc tccactgcat ccagctcgtg cagctggaaa tcggcggtga acggcaggct
      181 gcgcatgaag gcggcatcgc cgaaggccag gcatagccgg ccacccgggc gcacgacccg
      241 tgccagttcg cccagcaccg gcgccaggtc tggccagaag tacagggtgt tgacggccag
      301 tgccgcatcc atcgcggcat cggcgatcgg cagggcatgg gcgtcgccat agcgcatccc
      361 ggcccgctcg gccagcccgg cggcgacgag ctgccggttg ccggcctcga ccatggcgct
      421 ggacagttcg atgcccaggt agcggctgtc gctggcctgc agaagcagcg gcgcaaacgc
      481 agcgttgccg gggccgatct ccagcacccg ttcgcctgag gtcaccgcca gcaggccgat
      541 cgcggcccgg ttgagcgcgc cattgctgcg gttcatcgat tcggccacag cctgtgcggc
      601 gtcgccgtgg gggtgccgca gctgcgcggc cagggtggaa gcatccagca tcatcatcgt
      661 ccgtcgcggg aatctggacg tggcggcggc ggggtccgcc gacgaccata gcgctgcctt
      721 cgcagcttgg gaagtagggg aaccccgctt cagggtgatg aggaaatgtc cagcgtcgca
      781 gtcggtgaga tctggttgtc cacagggggt gtggattacg cgtgggcaac tttgtggata
      841 agcggcgaca ggcgccaccc ccctaggctg tcaagatggg tggcgaaaaa ttcaccgccg
      901 gtgaggacag gtgagggagc ggtgaaggat cggcgcggcc agtgctgtcg ccagcggcgg
      961 cgctcgcggt aacctgtggg ccttgatgct ccgtgagacc ccatgaaacg tcacttctcg
     1021 atgctgcgcg aattccagct ggccgactgg ttcaccctgg ccaatgcttt ctgcggcacc
     1081 ggtgcggtgt tcgccgcaat gcgcttcctg caggacggcg agcgcggcta cctgatgttc
     1141 ggcatggcgc tgatcccgct ggccttcatc ttcgacgcgc tggacgggcg catcgcgcgc
     1201 tggcgcaaat ccagctccac cctgggccgc gagctggatt cgctgtcgga cgtgatctcc
     1261 ttcggtgtgg ccccggccgc actggcctat gcctgtggca tgcagggcgg gtgggactgg
     1321 ctggtgctga gctatttcgt ctgctgcggc gtcagccgcc tggcgcgcta caacgtcacc
     1381 gccgaggcaa tgacgggcga cgagggcaag gtcacgtatt tcgagggcac cccgatcccg
     1441 accagcctgg tactggtgat cgtgctggcg atcgcggcag gcaccggcgc catcggccag
     1501 gaaatctggt tcggccaatg gcagatcggc ccgtggcagc tgcacccgat ggtgctgctg
     1561 ttcgccctgt ccgggtcgct gatgatcagc aagaccctgc gtattcccaa gccatgaccc
     1621 agccctgcgg aggcctgcga tgaccagctc ggcccacgac gccggcagca gcgatttcga
     1681 agccctggcc cggcagtact tcggcgcctg gggagatgcc ctgcgccacg cggcgacgcc
     1741 tggcgccccg gctggcgatg gcccgggcag ctggcagcgg ctgttcgacg agtggggcca
     1801 gctgctgccc gaacaggggc cgggcgcgcc ggaagacgct gtgcgccggt tccgcgaaca
     1861 ggccggtagc tggtacggca ccatgcagga cgtggccgcg cgattcgccg gccgcgacgc
     1921 cagcagcgcc gacgtggccc aggcctggcg cgaggcggtg caggggcagg gtgatggcat
     1981 gctgcaatgg atgctgcagg gcgctcgtgg cagcacccac gccggcgccg ccgtgcccga
     2041 attcgcctcc tggctgcagc agttccagtt gcaggcgggc ccatggctgc agagcccggc
     2101 gtttggtcca ggccgtgagc accaggcgcg ctggcaggcg ctgctgcgcg cgcaggagga
     2161 ataccagcaa cattcgcgcg cctacgtcga gcagatcaag caggcgctgg acgaggcctt
     2221 cgcgttgttt gaacagcgcc tggcccagca cgagcagccc ggcagccaat tgaccagcgc
     2281 ccgcgcgatg ttcgacctgt ggatcgaagt ggccgaagag gcctacgcca aggtcgccat
     2341 gtccgagccg ttccagcagg tgtacgcctc gctgggcaac gcacagatgc gcctgcgcgc
     2401 ctgcctgcag cgcgaggtgg aacagatgag tgagcgcgtc ggcctgccga cccgcagcga
     2461 gatggacgcc gcgcaccgcc gcatcgccga gctggagcgc agcctgcgtc gactgcaggc
     2521 gcaggtggcg gtgctggcgg gtaccgccac cgtggatccc gtggcgcagc cggccccggc
     2581 gaaagtgaag ccggccgcgc gcaaggcggt gaagaaggcc gcacctgcca acaaggcggc
     2641 ccccagcaag gcgcctgcaa aaaaagtgcc cgcaaggaag gcgcctgcga agaaggccgc
     2701 cgcccgcacc tcgtcacgga cgcgtgaccg atgaagggac cgctgggctt caacgccgac
     2761 gacctgatgc aggaaaccct ggccatgcag cgcaagctgc tggaagggct cacgctgctg
     2821 ccgcaggtgg aggacgtgga ttatggcgtg accgcccgcg aggaagtctg gcgcgacggc
     2881 aaggtggtgc tgtatcgctt cgtgggcgaa caggcgccga cccggcgcac gccgctgttg
     2941 attgtctacg cgctggtcaa ccggccgtac atggtcgatc tgcaggctga tcgctcactg
     3001 gtgcagaagc tgctggcgct gggccaggac gtatacgtgc tggactgggg ctacccggac
     3061 cgctccgaac gcttccagac cctggaggat tatctgctgc gctatatcga tggcgcggtg
     3121 gacgtgttgc gccagcgcag tggtggaccg gtggacctgc tcggcatctg ccagggcggc
     3181 gtgttcgcgc tgtgctacgc cgcgctgcgc cggcacaagc tgggcaagct gatcaccatg
     3241 gtcaccccgg tcgatttcca gaccgccgac aacatgctct cgcactgggc gcggcaggtg
     3301 gacgtggacc tgctggtcga cacgctgggc aacatcccgg ccgatctgat gaatgccagc
     3361 tacctgatgc tcaagccgtt ccgcctgaac gtgcagaagt acgtgggcct gctcgacatc
     3421 ctcgatgaca aggccgcgct ggaggatttc ctgcgcatgg agaagtggat cttcgactca
     3481 ccggatctgg caggcgaagc gttccgtgaa ttcatcaagc agttctacca gggcaatgga
     3541 ttggtgaacg gcacggtgcg gatcggcgag gaggcggtgg atctgtcgca ggtgaccctg
     3601 ccggtgctga acatctacgc cgagcaggac catctggtgc cgccggatgc gtcgcgcgcg
     3661 atgcgcgggc atctgggcac cgaggactac accgagtcca gtttccgcgg cggccatatc
     3721 ggcatttacg tgtccgggcg cgcacagcgc gaagtgccgg ccacgatcga tggctggctg
     3781 aaggctcgcg acctgtagag tcgagcttgc tcgactgccc ttggggggat gatgacgtac
     3841 cggatttcgt tgattcttgc cgcactgctg gcggcacccc tggccgacgc cgcccccggc
     3901 ccgcaggcgc aacgcgagat cgcccagttg atctccagcc tcgacggttc gcagtgccgg
     3961 ttccagcgca atggcagctg gtacgacggc agcgatgcgc gcgcgcacct gcaacgcaag
     4021 tacgactacc tgctgaagaa ggacatggtc gacagcgccg agcagttcat cgagcgcgcg
     4081 gccagccaga gcagcatgag cggcaagccc tatcgcatcc aatgtcccgg gcagcctgaa
     4141 cagacggctg cggcctggtt tggcgcccgc ctgcaggccc tgcgccaacg cgcgccgtag
     4201 acatggccag ggtgtagagt cgagccgcgc ttgactgcgc tttctggttc ccgaggagat
     4261 gccaccatga acaccacgcc acgcacgctg tcgcgttcgt tgaacgaccg catgattgcc
     4321 ggcgtgatgg gtggcattgc ccatcgcttc ggctggaatg ccaccctggt acggatcgtg
     4381 ttcgtgctgg tctcgatcgg ctcggcggcc ttccccggca tcctggtcta cctgatcctg
     4441 tggctgctga tcccgaacga ggccgattga acgccacctc ccggccctgg ccactctggc
     4501 tgcgcgcgct gcaggtgctg ggcgcggtat ggacgctgcc caatacgctg atcggcctga
     4561 tcggtggcct ggcgggcctg ctgggtgggg cgacgctgcg ctggagcgcc cgcgactgtg
     4621 cgctcatctt tgatcactgg ccgtgggggc cgggcggggc gatcacgctg ggcaatgtga
     4681 tcctgcatac cgggcacgac ctgggcatgt cctgccgcac ctatgcgcat caggccgggt
     4741 ggggcgtgga gccgctgatc cggctggacg accacgagcg cgcgcacgtc taccagtatc
     4801 tggtgctggg gccgctatac ctgccggtgt acctgctctg cggcggggtg agcgcgcgca
     4861 atccgttcga gcgcgcggcg gatcattacg cccggttcgg gcagggttgg tggccgtagg
     4921 tttccagcca ac
//
LOCUS       DAOKIP010000253         4926 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.254,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000253 DAOKIP010000000
VERSION     DAOKIP010000253.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 4926)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4926)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4926
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.254"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            <1..1321
                     /locus_tag="QEL58_003620"
     CDS             <1..1321
                     /locus_tag="QEL58_003620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019337014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF4129 domain-containing protein"
                     /protein_id="HDS1678046.1"
                     /translation="GTGFWGYLGWRRFSVLRSLCLPVNLLEGNAPGQRGPRRRAVAAG
                     AAGAATVLTVTCLAFEAVLVSGAIGAVFMFMPLDLMSESWRAAWDMIGRDTPAWARLG
                     FNLACWLASVLVGPFFVGAGFGLYLNRRTQMEAWDVEIALRRLRDRLLPAASTLALLL
                     CLALPLACAPVHAQDAQDAPSITDDADNAGEDEDSAEEPATAANDPANTPAMIFGDTP
                     VDTAGFRQAVNRAYEDPLQHPTRQVTHWKPIEQAQEAKKEDKQLQGDSGNKGERKARK
                     DGIAWLARLAEWGLWGLLGILLLVLLLTARMWLPWLRGSGRRKAGTAPPVVEEAVELP
                     AVLPPDVATQAGLLWDQGRPRQALALLYRASVRTVGERSGIALPPGATEAQCLRASRR
                     MPEAADRDLFARIVRMWQYAAYGGRLPSRSDFDALADTLRQQYGWQA"
     gene            1318..2502
                     /locus_tag="QEL58_003621"
     CDS             1318..2502
                     /locus_tag="QEL58_003621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005411534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4350 domain-containing protein"
                     /protein_id="HDS1678047.1"
                     /translation="MSPRLFWSLLLGLLVLIGVPLTILYLRTHERVTETLTLPPQGEA
                     SYNPLYVLGQALRADGIEVHSRPRLDLQQMTLGPHDTVVLLQDSSELPAPSVKPLLDW
                     VDRGGHLLVRTPPPAEDDTGSTQGPLLDQLGVDSLFQRSDCQPFHIDDDSGHSEFCGG
                     RRFTLGFAARTQAERRWGGDRDLVFARLRHGQGKVSVLADMEFMRGEVDTPAARLGAA
                     AGRPSDGLHDPAHRDLTRYLLDPNYGRGAVWLVYAGRPPSLWARLFYHGWPLWVPLLL
                     ALLGWLWGRSQRFGSLQPSPLLERRSLLEHVRASGELLLRFGHGARLYDAVLALFLHR
                     LRLRAPVAAALDGAPREQAIAELLKWPQGRVASALTPPPPHDSSALRERIRLLLQMRS
                     LL"
     gene            2499..3485
                     /locus_tag="QEL58_003622"
     CDS             2499..3485
                     /locus_tag="QEL58_003622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MoxR family ATPase"
                     /protein_id="HDS1678048.1"
                     /translation="MTEVPELPAAANARLIERVDAIRDAVGHAFIGQADVLDQILVAL
                     LAGGHVLIEGVPGLGKTLLVRALAQALELDYGRVQFTPDLMPSDVSGHAVYDPKSESF
                     KIRRGPVFTNLLLADEINRAPAKTQSALLEVMQEGQVTIEGKAFTLAPPFMALATQNP
                     LEQEGTYPLPEAQLDRFLLKVLIDYPQLEDEKRMVTAITSGRAASDFDLSQVPRVLGA
                     GELLELQRATAAITVDDEVIDYAVRIVAATRQWPGIAVGAGPRGSIALVRASRAQAVL
                     AGRDFVTPDDVRDIARPALRHRIALAPELQIEGQDADDVLGALLAKVEAPRR"
     gene            3482..4780
                     /locus_tag="QEL58_003623"
     CDS             3482..4780
                     /locus_tag="QEL58_003623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005411536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF58 domain-containing protein"
                     /protein_id="HDS1678049.1"
                     /translation="MRPSPLLLVLLLAWAVLGGLVLGGLLPRGGWALAALAIALPALW
                     DLWRQARRPSPQVQRELPEALALGVRRDAALRLQADASMTVQVFDLVPGGWPLESLPQ
                     RVQLRAGSASTLHYHLQPLQRGLFRFEGVHLRMRSPWRLWWQQRTLPPALDVRVYPNF
                     VPLTRFALFSADQASRLVGAHVKRRRGEGTDFHQMREYRVGDSLRQLDWKATARARKL
                     ISREYQDEKNQQLLLMLDSGRRMLASEGGLSHFDHALNASLVVAYLALRQGDAAGLFA
                     AGGERRWVAPQRGMGTVEHLLRASYDLQPRAVATDYLAAATEVSLRQRRRALVMLVSN
                     VRDEDIEDLLAAVRLLQQRHLVCVASLRERELDAALEDEVQTLEDAAQAGAAALYLQQ
                     RAKAHEALRSEKVMVLDVTADALPAALVERYLAVKREGLL"
BASE COUNT          707 a         1707 c         1766 g          746 t
ORIGIN      
        1 cggtaccggc ttctggggct acctgggctg gcgccgcttc agcgtgctgc gcagcctgtg
       61 cctgccggtg aacctgctgg aaggcaacgc accgggccag cgcggcccgc gccgtcgcgc
      121 ggtcgcggcc ggcgccgcag gtgcagcgac ggtgctgacg gtgacctgcc tggcattcga
      181 agcggtgctg gtgtccggcg cgatcggtgc ggtgttcatg ttcatgccac tggacctgat
      241 gtccgaatcg tggcgtgcgg cctgggacat gatcggccgg gacacgccgg cgtgggcacg
      301 gcttggcttc aacctggcgt gctggctggc ctcggtgctg gtcgggccgt tcttcgtcgg
      361 tgccggcttt ggcctgtact tgaaccggcg cacgcagatg gaagcctggg atgtggaaat
      421 cgccctgcgc cgcctgcgtg atcgactgct gccggcggcg tcgacactgg ccctgctgct
      481 gtgcctggcg ctgccactgg cctgcgcacc ggtgcacgcg caggacgcgc aggacgcgcc
      541 gtcgatcacc gacgacgccg acaatgccgg cgaggacgaa gacagcgcgg aggaaccggc
      601 caccgccgca aacgaccccg ccaacacgcc ggcaatgatc ttcggcgaca caccggtgga
      661 taccgccggt ttccgccagg cggtgaaccg tgcctacgaa gacccgctgc agcacccgac
      721 ccgacaggtc acgcactgga agccgatcga gcaggcccag gaggcgaaga aggaagacaa
      781 gcagctgcaa ggcgacagcg gcaacaaggg cgagcgcaag gcacgcaagg acggcattgc
      841 ctggctggcg cggctggccg agtggggcct gtggggcctg ctgggcatcc tgttgctggt
      901 gctgctgctg accgcgcgga tgtggctgcc ctggctgcgt ggcagtggcc ggcgcaaggc
      961 cggtaccgcg ccgccggtgg ttgaagaggc ggtggaactg cccgcggtgc tgccgccgga
     1021 cgtggccacc caggccggcc tgctatggga ccagggccgg ccacggcagg cgctggccct
     1081 gctctaccgc gccagcgtac gcaccgttgg cgagcgcagc ggcatcgcgc tgccccccgg
     1141 cgccaccgag gcgcagtgcc tgcgtgcctc acggcgcatg ccggaggccg ccgaccgtga
     1201 cctgttcgcg cgcatcgtgc gcatgtggca gtacgccgcc tatggtggcc gcctgcccag
     1261 ccgcagcgac ttcgacgcgc tggccgacac gctgcgccag cagtacggat ggcaggcatg
     1321 agcccgcgcc tgttctggtc gttgctgctg ggcctgctgg tgctgatcgg cgtgccactg
     1381 acaatcctct acctgcgcac gcacgaacgg gtgaccgaga cgctcaccct gccgccgcag
     1441 ggcgaggcca gttacaaccc gctgtacgtg ctcggccagg ccctgcgcgc cgacggcatc
     1501 gaggtgcatt cacgaccacg gctggacctg cagcagatga cgctggggcc gcacgacacg
     1561 gtggtgctgc tgcaggacag cagcgaactg ccggcaccga gcgtgaaacc gctgctggac
     1621 tgggtcgacc gcggcgggca cctgctggtg cgcacaccgc ccccggcgga ggacgatacc
     1681 ggcagcacgc agggaccctt gctggaccag ttgggggtgg acagcctgtt ccagcgcagc
     1741 gactgccagc cgttccatat cgacgacgac agcggtcaca gcgagttctg tggaggccgc
     1801 cgcttcacgc tcgggtttgc cgcgcgcaca caggccgaac gccgctgggg cggtgaccgc
     1861 gacctggtgt tcgcgcgcct gcgccatggc cagggcaagg tgagcgtact ggccgacatg
     1921 gagttcatgc gtggcgaggt cgacacaccc gccgcacggc tgggcgccgc tgcgggcagg
     1981 cccagcgatg gcctgcacga tccggcccac cgcgacctga cccgctatct gctcgatccg
     2041 aactacggca ggggtgcggt ctggctggtc tacgccggac gcccgccgtc gctgtgggcg
     2101 cgcctgttct accacggctg gccgctgtgg gtgccgctgc tgctggccct gctgggttgg
     2161 ctgtggggcc gctcgcagcg cttcggcagc ctgcagccgt cgccgctgct ggaacgccgc
     2221 tcgttgctgg agcacgtgcg tgcaagcggc gaactgctgc tgcgcttcgg ccacggtgcg
     2281 cgcctgtacg acgccgtgct cgccctgttc ctgcaccgcc tgcgcctgcg cgcgccggtc
     2341 gccgccgcac tcgacggcgc accgcgcgag caggccatcg ccgagctgct gaagtggccg
     2401 cagggccgcg tcgccagcgc gctcacaccc ccaccgccgc acgattcctc cgccctgcgc
     2461 gagcgcatcc gcttgctgct ccagatgaga tccctgctat gaccgaagtg cccgagctgc
     2521 cggcggccgc caacgcccgc ctgatcgaac gcgtcgatgc catccgcgat gccgttggcc
     2581 atgccttcat cggccaggcc gatgtgctgg accagatcct ggtggcgctg cttgccggtg
     2641 gccatgtgct gatcgagggc gtccccgggc tgggcaagac cctgctggtg cgtgcgctgg
     2701 cacaggccct ggaactggat tacggccgcg tgcagttcac ccccgacctg atgcccagcg
     2761 acgtcagcgg ccacgcggtg tacgacccga agagcgagag cttcaagatc cgccgcggcc
     2821 cggtgttcac caacctgctg ctggccgatg agatcaaccg cgcaccggcc aagacccagt
     2881 cggcgctgct ggaagtgatg caggaaggcc aggtgaccat cgaaggcaag gcgttcaccc
     2941 tggcgccgcc gttcatggcg ttggccacgc agaacccgct ggagcaggaa gggacctatc
     3001 cgctgccgga agcacagctg gaccgcttcc tgttgaaggt gctgatcgac tacccgcagc
     3061 tggaagacga gaagcgcatg gtgactgcga tcaccagcgg ccgcgccgcc agcgatttcg
     3121 acctgagcca ggtgccacgc gtacttggtg ccggcgagtt gctggaactg cagcgcgcca
     3181 ctgccgcgat caccgtcgat gatgaagtga tcgattatgc ggtgcggatc gtggcggcca
     3241 cccggcagtg gccggggatc gccgtcggtg ccgggccgcg cggcagcatc gcactggtgc
     3301 gtgcgtctcg cgcgcaggcg gtgctggccg gtcgtgattt cgtcactccg gatgatgtgc
     3361 gcgacattgc tcgcccggcg ctgcgacacc gcatcgcgct ggccccggaa ctgcagatcg
     3421 aaggccagga cgccgacgat gtgctgggtg cactgctggc caaggtggaa gcaccgcgcc
     3481 gatgaggccg tcgccgctgc tgctggtgct gctgctggcc tgggccgtgc tgggcggcct
     3541 ggtgctgggc ggcctgctgc cgcgcggggg ctgggcgctg gccgcactgg ccatcgccct
     3601 gccggcgctg tgggacctgt ggcggcaggc gcgacgacct tcgccgcagg tgcagcgcga
     3661 gctgcccgag gcgctggcgc tgggcgtacg tcgcgacgcc gcactgcggt tgcaggcgga
     3721 cgcatcgatg acggtgcagg tgttcgacct ggtgcccggt ggctggccgc tggaatcgct
     3781 gccacaacgt gtgcagctgc gggccggcag cgcctccacc ctgcactacc acctgcaacc
     3841 gctgcagcgc gggctcttcc gcttcgaagg cgtgcacctg cgcatgcgtt cgccctggcg
     3901 gctgtggtgg cagcagcgca cgctgccgcc cgcgctggac gtgcgcgtct atccgaactt
     3961 cgtgccgctc acccgcttcg ccctgttcag tgccgaccag gcctcgcggc tggtcggtgc
     4021 gcacgtcaaa cgccgccgcg gtgaaggcac cgacttccac cagatgcgcg agtaccgcgt
     4081 cggtgacagc ctgcgccagc tcgactggaa ggccacggcg cgtgcgcgca agttgatctc
     4141 gcgcgaatac caggacgaaa agaaccagca gctgctgctg atgctcgaca gtggccggcg
     4201 catgctggcc agcgaaggcg ggctctcgca cttcgaccat gcattgaacg cctcgctggt
     4261 ggtggcctac ctggccctgc gccagggcga tgccgccggc ctgttcgccg ctggtggcga
     4321 gcgccgctgg gtggcgccgc agcgcgggat gggcacggtc gagcacctgc tgcgcgccag
     4381 ctacgacctg cagccgcgcg cggtggccac cgactatctg gctgccgcca ccgaggtatc
     4441 actgcgccag cgccggcgcg ccctggtgat gctggtcagc aacgtgcgcg acgaggacat
     4501 cgaggacctg ctggcagccg ttcgcctgct gcagcaacgc cacctggtgt gcgtggccag
     4561 cctgcgcgag cgcgagctgg acgctgcgct ggaggacgag gtgcagacgc tggaggacgc
     4621 cgcccaggcc ggcgccgctg cgttgtacct gcagcagcgc gcgaaggcac acgaagcgct
     4681 gcgcagcgag aaggtgatgg tgctggacgt gaccgccgac gcgctgcccg ctgcgctggt
     4741 ggagcgctac ctggcggtga agcgcgaagg gttgctctga tgcccacagc ggctgccggc
     4801 cagcggccgg cactaccggc acatcgcttt ggtgggtgcc aaccttggtt ggcaccaatg
     4861 ccacagcgcc gaccaaggtc ggcctctacc cacagcggtt gccggcccgc ggccggcact
     4921 accggc
//
LOCUS       DAOKIP010000254         4916 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.255,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000254 DAOKIP010000000
VERSION     DAOKIP010000254.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 4916)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4916)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4916
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.255"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(28..804)
                     /locus_tag="QEL58_003624"
     CDS             complement(28..804)
                     /locus_tag="QEL58_003624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005419541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF481 domain-containing protein"
                     /protein_id="HDS1678050.1"
                     /translation="MSLRVSLLIPLLLCAPLAYAQDASELAAMSSPWSGSGGELGFAS
                     ARGNSSTESFNGRLRLRYTDGDWVHSMDLFGLRSSSKVTETADDGTTTRRNNTTANRY
                     TGSAGSALQLGEHRQLTATVRTERDDFATYDRQSSFGLGYGTRLWNTDRFSFDAQIGP
                     GVRRTHSTEDDRTRTGMIGRGLFDLKYSLTDNTDLVNTLLVESGSYNTFGQNDFGVSV
                     SMNEHLALKAGWQARYNSDVAEDKRKTDTLTTMNVVYKFK"
     gene            complement(911..1513)
                     /locus_tag="QEL58_003625"
     CDS             complement(911..1513)
                     /locus_tag="QEL58_003625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1678051.1"
                     /translation="MRRLPALSLLACLLLAACDRAPAPASTEAPVPAADPAQAVLGAS
                     QRFAALRSFHAELEVLGAPQPVRSAMDFVAPDRFRVQTPAGPQTIIGDTLFLQAEGAI
                     RQVPAPPGLLEQWRNPLPADALPADLQAEDLGSQTLDGVETRHYRLRGSQPSERLEYW
                     IDAQGLPRQLVRSGSSNGRSFQLRLRYSRFNDPALRVDLP"
     gene            1595..2566
                     /locus_tag="QEL58_003626"
     CDS             1595..2566
                     /locus_tag="QEL58_003626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YafY family transcriptional regulator"
                     /protein_id="HDS1678052.1"
                     /translation="MDRYERITALHRLLKSARYPVTVATLQDKLGCSRATVYRDLAFL
                     RDALMAPIEGDGEAGFRYHADESDRFELPGLWLSSEELHALLASQHLLARTGGGVLSS
                     VLAPLQQRIESLLAAQAGVSSWPVDRVRVIPHRGRKFDEGSFRSVASAVLERRQLAFE
                     YRARSTDEPTKRTVSPQRLTHYRDNWYLDAWDHDRDALRSFAVDRIHKARVVDSTARD
                     VADSELDEQLGASYGIFSGAPKGWATILFSAKAARWVADEHWHSKQQGRFLADGRYEL
                     KVPYSVSRELLMDVLHYGSDAEIVEPVMLREQAKALLELALSNYDNA"
     gene            2593..3387
                     /locus_tag="QEL58_003627"
     CDS             2593..3387
                     /locus_tag="QEL58_003627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012481327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MetQ/NlpA family ABC transporter
                     substrate-binding protein"
                     /protein_id="HDS1678053.1"
                     /translation="MKKTLLLPLLAAALALTACGKSGEPSQKLVVAATAVPHAEILEV
                     VKPILKQEGVDLDVRVFNDYVQPNDQLVQKQVDANYFQTEPYLDAYNRDRKTDLVKVI
                     GVHIEPFGAYSRKIKSLAELREGADVVIPNDPSNNSRALILLHKAGVIELKDPTNALS
                     TQRDIIANPKNLKFRELDSAMLPRVLDQVDLALINTNYALDAGLNPTQDALAIESKDS
                     PYVNFLVARPDNKDDARVQKLAKALTSPQVKAFIETKYKGAVLPAF"
     gene            complement(3400..4899)
                     /gene="glpK"
                     /locus_tag="QEL58_003628"
     CDS             complement(3400..4899)
                     /gene="glpK"
                     /locus_tag="QEL58_003628"
                     /EC_number="2.7.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010481306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol kinase GlpK"
                     /protein_id="HDS1678054.1"
                     /translation="MTPRYVLAIDQGTTSSRAILFDRAGNIVGSAQREFAQIFPHPGW
                     VEHDPREILTSVYATLTELLSRGQIDPRHIAALGITNQRETTVVWDRATGQPIHNAIV
                     WQSRQSHALCERLKSDGHEALVRERTGLLIDAYFSATKVRWILDHVEGAQQRAERGEL
                     LFGTIDSWLVWNLSGGQAHVTDYSNAARTLLFNIHTLDWDDDLLALLDIPRAMLPQVR
                     DSSSVYAHTRPQFFFDHPIPIAGIAGDQQAALFGQACFQPGMVKNTYGTGCFMLMHTG
                     TQAVRSRNGLLTTIAWGLDGRVEYALEGSIFVAGSVVQWLRDGLRMIERAGDSQALAA
                     QVPDSGGAYLVPAFVGLGAPYWRSDVRGAMFGLTRGTRKAHFVRAALEAMAYQTRDVL
                     DAMQSDAGIALTELRADGGAIGNDFLAGFQADILGVPLLRPRLTETTALGAAYLAGLA
                     VGFWTSREQITAQWGLDRRFEPQMEVARREKLYAGWQQAVAATLAFHVD"
BASE COUNT          810 a         1638 c         1692 g          776 t
ORIGIN      
        1 agaacgggcg cctttggcgc ccgttgctta tttgaacttg tagaccacgt tcatcgtggt
       61 cagcgtgtcg gtcttgcgct tgtcctcggc cacgtcactg ttgtaacgcg cctgccagcc
      121 ggctttcagc gccaggtgct cgttcatgct caccgagaca ccgaagtcat tctggccgaa
      181 ggtgttgtac gaaccggatt cgaccagcag ggtgttgacc aggtcggtgt tgtcggtcag
      241 cgagtacttc aggtcgaaca ggccgcggcc gatcatgccg gtacgggtgc ggtcgtcctc
      301 ggtgctgtgg gtgcggcgca caccggggcc gatctgtgcg tcgaaggaga agcgatcggt
      361 gttccacagg cgggtgccgt agcccaggcc gaacgaactc tggcggtcgt aggtggcgaa
      421 gtcgtcgcgt tcggtacgca ccgtcgcggt cagctggcgg tgctcgccca gctgcagcgc
      481 gctgccggcg ctgccggtgt agcggttggc ggtggtgttg ttgcgacggg tggtggtgcc
      541 atcgtcggcg gtctcggtca ccttcgagct cgagcgcagg ccgaacaggt ccatgctgtg
      601 cacccagtcg ccatcggtgt agcgcaggcg caggcggcca ttgaagcttt cggtgctgct
      661 gttgccgcgt gccgatgcga agccgagctc gccgccgctg ccgctccacg gcgaggacat
      721 cgccgccagt tcggaggcat cctgtgcata cgcgagcggc gcgcacagca gcaggggaat
      781 cagcagggac acgcgcaggg acatcgaggc ttctccgaag cggttaacag ccggtgatga
      841 tactggaagc gtgatggcgg tccgaatcga tccaatgcgc gcttcagcga gcgttgccgc
      901 gatcgcctat tcagggcaga tcgacgcgca atgccggatc gttgaagcgc gagtagcgca
      961 ggcgcagctg gaagctgcgg ccattgctgc tgccgctgcg caccagctgc cgcggcaggc
     1021 cctgggcatc gatccagtac tccaggcgct cactgggctg gctgccacgc agccggtagt
     1081 ggcgggtctc gaccccgtcc agggtctggc tgcccaggtc ctcggcctgc aggtcggcgg
     1141 gcagggcatc ggccggcaac gggttgcgcc actgttcgag caggcccggc ggggccggca
     1201 cctggcggat cgcgccctcg gcctgcagga acagcgtgtc accgatgatc gtctgcggtc
     1261 cggccggggt ctgcacgcgg aaacggtcgg gggcgacgaa gtccatggcg ctgcgcaccg
     1321 gctggggcgc gcccagcacc tccagctcgg cgtggaagct gcgcagcgcg gcgaagcgct
     1381 ggctggcgcc cagcacggcc tgcgccggat cggcggccgg taccggggct tcggtgctgg
     1441 ccggcgccgg tgcgcgatcg caggcggcca gcagcaggca ggccagcagg gacagggcag
     1501 gcaaccggcg catcgggcat tccatggggg tgggggcgac cacgatagcc caaacgtccc
     1561 acacaagacc cgcgagtcgg acataatcgg gggtatggac cgatacgaac gcattaccgc
     1621 cctgcatcgt ctgctcaagt ccgcgcgcta tccggtgacg gtggcgaccc tgcaggacaa
     1681 gctcggttgt tcccgtgcca ccgtctaccg cgacctggcc ttcctgcgcg atgcgctgat
     1741 ggcaccgatc gagggcgacg gtgaggccgg cttccgctac cacgccgacg aaagcgatcg
     1801 cttcgagctg cccggcctgt ggctgagctc ggaggagctg catgccctgc tggcctcgca
     1861 gcacctgctg gcgcgcaccg gcggcggcgt gctgtcctcg gtgctggcac cgctgcagca
     1921 gcgtatcgaa agcctgctgg cagcccaggc aggcgtctcc agctggccgg tggaccgcgt
     1981 gcgggtgatc ccgcaccgtg ggcgcaagtt cgatgaaggc agcttccgca gcgtggcttc
     2041 ggcggtgctg gagcgccgcc agctggcgtt cgagtaccgc gcccgctcca ctgatgagcc
     2101 gaccaagcgt acggtctcgc cgcagcgcct gacccactac cgcgacaact ggtacctgga
     2161 tgcctgggac cacgaccgcg acgcgctgcg cagcttcgcc gtcgaccgca tccacaaggc
     2221 gcgggtggtc gacagcactg cgcgcgatgt tgccgacagc gaactggacg agcagctggg
     2281 cgccagctac gggatcttct ccggcgcgcc gaagggctgg gcgaccatcc tgttcagcgc
     2341 caaggccgcg cgctgggtgg ccgacgagca ctggcactcc aagcagcagg gccgcttcct
     2401 ggccgatggc cgctatgaac tgaaggtgcc gtacagcgtc tcgcgcgagc tgttgatgga
     2461 cgtgctgcac tatggctcgg atgccgagat cgtggagccg gtgatgctgc gcgagcaggc
     2521 caaggccctg ctcgagctgg ccctgagcaa ctacgacaac gcctgaccct ccccacgaga
     2581 accccaccgc ccatgaagaa gaccctgttg ctgcccctgc ttgccgctgc gctggccctg
     2641 accgcctgcg gaaaatccgg cgaaccctcg cagaagctgg tggtggccgc cacggccgtg
     2701 ccgcacgccg agatcctcga ggtggtcaag ccgatcctca agcaggaagg cgtggacctg
     2761 gacgtgcgcg tgttcaacga ctacgtgcag cccaacgacc agctggtgca gaagcaggtg
     2821 gacgccaact acttccagac tgagccgtac ctggatgcct acaaccgcga ccgcaagacc
     2881 gacctggtga aggtgatcgg cgtgcacatc gagccgttcg gtgcgtactc gcgcaagatc
     2941 aagtcgctgg ccgagctgcg tgagggcgcc gacgtggtga tcccgaacga cccgagcaac
     3001 aacagccgtg cgctgatcct gctgcacaag gccggcgtga tcgagttgaa ggacccgacc
     3061 aacgcgctgt cgacccagcg cgacatcatc gccaatccga agaacctgaa gttccgcgag
     3121 ctggactcgg cgatgctgcc gcgcgtgctg gaccaggtcg acctggccct gatcaacacc
     3181 aactatgcgc tggatgccgg cctcaacccg acccaggacg cgctggcgat cgaaagcaag
     3241 gattcgccgt acgtgaactt cctggtcgcg cgcccggaca acaaggacga tgcccgcgtg
     3301 cagaagctgg ccaaggcgct gaccagcccg caggtgaagg ccttcatcga aaccaagtac
     3361 aagggcgcgg tgctgccggc gttctgaccg gcactaccct cagtcgacgt ggaaggcgag
     3421 ggtggcagcc accgcctgct gccacccggc gtacagcttc tcgcgccgcg ccacctccat
     3481 ctgtggctcg aagcgccggt ccaggcccca ttgcgcggtg atctgctcgc ggctggtcca
     3541 gaaccccacg gccagcccgg ccaggtaggc cgcacccagc gcggtggtct cggtcagtcg
     3601 cggccgcagc agcggcacgc cgaggatgtc ggcctggaag ccggccagga agtcgttgcc
     3661 gatcgcaccg ccatcagcgc gcagctcggt cagcgcgatg cctgcatcgg actgcatcgc
     3721 atccagtaca tcgcgggtct ggtaggccat cgcttccagc gcggcgcgca cgaagtgcgc
     3781 cttgcgcgtg ccccgggtca acccgaacat cgcgccgcgc acgtcactgc gccaataggg
     3841 cgcgcccagg ccgacgaacg caggcaccag gtaggcacct ccactgtcgg gcacctgtgc
     3901 ggccaacgcc tggctgtcgc cggcgcgctc gatcatgcgc aggccgtcgc gcagccactg
     3961 caccaccgag ccggccacga agatcgagcc ctccagcgcg tactccacgc gcccgtccag
     4021 gccccaggcg atggtggtca gcagtccgtt gcgcgaacgc accgcctggg tgccggtatg
     4081 catcagcatg aagcagccgg tgccataggt gttcttgacc atgcccggct ggaaacaggc
     4141 ctggccgaac agcgccgcct gctggtcacc ggcgatgccg gcgatcggga tcggatggtc
     4201 aaagaagaac tgcggccggg tgtgcgcgta taccgaactg gagtcacgca cctgcggcag
     4261 catcgcgcgc gggatgtcca gcagcgccag caggtcgtca tcccagtcca gcgtgtggat
     4321 gttgaacagc agcgttcgcg cggcgttgct gtaatcggtc acgtgcgcct ggccaccgct
     4381 gaggttccac accagccagc tgtcgatggt gccgaacagc agttcgccgc gctcggcccg
     4441 ctgttgcgcg ccctccacgt ggtcgaggat ccagcgcacc tttgttgcgg aaaaatacgc
     4501 atcgatcagc aggccggtgc gctcgcgcac cagcgcctcg tggccatcgg acttcagccg
     4561 ctcgcagagg gcgtggctct gccgcgactg ccagacgatg gcgttgtgga tcggctggcc
     4621 ggttgcgcga tcccagacca ccgtggtctc gcgctggttg gtgatgccca gcgcggcgat
     4681 atggcgcggg tcgatctgcc cgcggctgag cagctcggtc agcgtggcat agacgctggt
     4741 aaggatctcg cgcgggtcat gctcgaccca gccagggtgc gggaagatct gcgcgaactc
     4801 gcgctgcgcg ctgccgacga tgttgccggc acggtcgaac aggatcgcgc gcgaactggt
     4861 ggtgccctgg tcgatggcca gcacgtagcg gggcgtcatg cagcgtctcc ggtagc
//
LOCUS       DAOKIP010000255         4847 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.256,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000255 DAOKIP010000000
VERSION     DAOKIP010000255.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 4847)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4847)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4847
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.256"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            194..1282
                     /gene="pstS"
                     /locus_tag="QEL58_003629"
     CDS             194..1282
                     /gene="pstS"
                     /locus_tag="QEL58_003629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007966222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter substrate-binding
                     protein PstS"
                     /protein_id="HDS1678055.1"
                     /translation="MKLHSAGLAALSLAIALGLSACGGDKQAAQQPAADGAAAPAAAG
                     AKVTAEVSGAGASFIFPLVSKWSADYNASTGAKINYQSIGSGGGIAQIKAGTVDFGSS
                     DKPLSSEELAQAGLAQFPSAIGGVVPVVNIEGLEGSKLRLSGALLADIFLGKVKTWND
                     PAIVAANPGVKLPDGKITLVHRSDGSGTTFNFSNYLSKVSPDWKAKVGEGTSVQWPDG
                     VGGKGNEGVASYVKQIKGSIGYVELAYALQNGMPYTAMQNAAGNWVEPSAETFAAAAA
                     SADWASAKDFNLVITNAPGDQAWPITATNFMLMQKQPKDAKRNQDTLAFFKWAFENGQ
                     AQANELHYVPLPAELVKQIEAYWATDLK"
     gene            1365..2333
                     /gene="pstC"
                     /locus_tag="QEL58_003630"
     CDS             1365..2333
                     /gene="pstC"
                     /locus_tag="QEL58_003630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008572163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease subunit PstC"
                     /protein_id="HDS1678056.1"
                     /translation="MNAIAQPVAAPSTRDARDARNDKLFRWVLVGTVIFVLIALACAA
                     LSMLWGGRHALQMQGLSFFFSADWNPVENKFGALAPIYGTLVTALIAMVIAVPVSFGI
                     AFFLTEVAPRWLRGPVGTAIELLAGIPSIIYGMWGLFVLVPVMTEYVTPFLNETLGEW
                     PIIGPMFQGPPLGIGMLTAGFVLAIMVIPFISSVMREVFLTVPTRLKESAYALGSTKW
                     EVSWDIVLPYTRSAVIGGIFLGLGRALGETMAVAFVIGNSVRLSPSLLEPGTTIAALI
                     ANDFGEATETYRSALLLLGFVLFIVTFVVLAIARLMLMRLSRKEGN"
     gene            2333..3196
                     /gene="pstA"
                     /locus_tag="QEL58_003631"
     CDS             2333..3196
                     /gene="pstA"
                     /locus_tag="QEL58_003631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005412770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease PstA"
                     /protein_id="HDS1678057.1"
                     /translation="MSTTADSLYLRRRIGNVVAITASCATALFGLFFLGWILFTLASK
                     GLAGINLDLFTKMTPPPMQEGGLANAFFGSAVMCALAIGIGTPLGVLAGTWLAEYGNA
                     RKAGTVVRFVNDILLSAPSIVLGLFVYTLYVMQTGGNFSAFAGALSLAFIVLPVVVRT
                     TDEMLRLVPSQMREAALSLGIPQWKVIVQVLYRSASAGIITGILLALARISGETAPLL
                     FTAFGNQYWNNNIFQPMASVPVVMNQFAGSPYESWQVLAWAGALVLTVFVLLVSLAAR
                     GILLRNRISHD"
     gene            3216..4046
                     /gene="pstB"
                     /locus_tag="QEL58_003632"
     CDS             3216..4046
                     /gene="pstB"
                     /locus_tag="QEL58_003632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019237787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter ATP-binding protein
                     PstB"
                     /protein_id="HDS1678058.1"
                     /translation="MNDLSNAVPMQRIAVPSSHESLHTPSPVKLAARGLDFYYDKFHA
                     LKGINLEIPEKRVTALIGPSGCGKSTLLRIFNRIYALYPKLEARGEVLLDGENILSPK
                     YPMNRLRSKVGMVFQKPVPFPMTIFENVAYGIRHHEKLSKADMADRVEQALRQGALWD
                     EVKDKLGQSALGLSGGQQQRLCIARAVALRPSVLLLDEPTSALDPISTSRIEQLVEEL
                     KHEYTIVIVTHNMQQAARVSDYTAFMYLGDLIEHDRTEVIFSQPSQRQTEDYITGRFG
                     "
     gene            4123..4830
                     /gene="phoU"
                     /locus_tag="QEL58_003633"
     CDS             4123..4830
                     /gene="phoU"
                     /locus_tag="QEL58_003633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate signaling complex protein PhoU"
                     /protein_id="HDS1678059.1"
                     /translation="MNLPNDHIVKSYDEEQQRLVAEIVRMGEMAVAQLEAAMDVIEKR
                     DENAAHRIIANDEAIDALEQQISHDVMRLALRGPMARDLREILAGLRIPADIERIGDY
                     AANVAKRSIALGKVPPLPQIQGLRALGRLAAQQVRRAIAAYRDNDADAALALREDDAR
                     LDAQYTALFRELLTYMMEDPRNITPCTHLLFMAKNLERVGDHATNIAENVWFLVHGEQ
                     PLPPREKRDETSSTGQP"
BASE COUNT          817 a         1708 c         1498 g          824 t
ORIGIN      
        1 gccatccgcc ggtcataccg tgcgcagatc cggggtctgc gggggtctcc cggatcgtgg
       61 cacaccctgt gaaacccttg tcggaacgtg atccaggaca cctctgtcat ggtcgtaata
      121 cggctgtaac aaaaacatca tttcatagcc gcatccgccg accccgtcgg ctcttccccg
      181 ctatggagtg accatgaaac tgcactcggc cggccttgcc gccctttccc tggccatcgc
      241 cctgggcctg tcggcctgcg gtggcgacaa gcaggccgca cagcagccgg ctgccgacgg
      301 tgctgccgct ccggccgctg ccggtgccaa ggtgaccgcc gaggtctccg gcgcgggcgc
      361 gtccttcatc ttcccgctgg tctccaagtg gtcggctgac tacaacgcca gcaccggcgc
      421 caagatcaac taccagtcga tcggctccgg cggcggcatt gcccagatca aggccggcac
      481 cgtcgacttc ggttcctcgg acaagccgct gagcagcgaa gagctggccc aggccggcct
      541 ggcccagttc ccgtccgcca tcggcggcgt ggtgccggtg gtcaacatcg aaggcctgga
      601 gggcagcaag ctgcgcctga gcggcgccct gctggccgac atcttcctgg gcaaggtcaa
      661 gacctggaac gatccggcga tcgtcgccgc caacccgggc gtgaagctgc cggacggcaa
      721 gatcaccctg gtccaccgtt cggatggttc gggcaccacc ttcaacttct ccaactacct
      781 gtccaaggtc agcccggact ggaaggccaa ggtcggcgaa ggcacctcgg tgcagtggcc
      841 ggacggcgtg ggtggcaagg gcaatgaagg cgtcgcgtcc tacgtgaagc agatcaaggg
      901 ttcgatcggc tacgtcgaac tggcctacgc gctgcagaac ggcatgccgt acaccgccat
      961 gcagaacgcg gccggcaact gggtcgagcc gagcgcggag accttcgccg ccgcggccgc
     1021 cagcgccgac tgggccagcg ccaaggactt caacctggtc atcaccaatg ccccgggcga
     1081 ccaggcgtgg ccgatcaccg ccaccaactt catgctgatg cagaagcagc cgaaggacgc
     1141 caagcgcaac caggacaccc tggccttctt caagtgggcc ttcgagaacg gccaggccca
     1201 ggccaacgag ctgcactacg tgccgctgcc ggccgaactg gtcaagcaga tcgaggccta
     1261 ctgggcgacc gacctgaagt gatggttacg acggtgcccg ccccgcgcgg gcaccgctgc
     1321 ttccacgcca tgccgccccg ccccttcctg gcccagccgt ccccatgaat gccatcgccc
     1381 agcctgtagc cgccccgtcc acgcgtgatg cgcgtgatgc ccgcaacgac aaactgttcc
     1441 gatgggtgct ggtcggcacc gtcatcttcg tcctgatcgc cctggcctgc gccgcgctgt
     1501 cgatgctgtg gggcggccgc catgccctgc agatgcaggg cctgagcttc ttcttctctg
     1561 ccgactggaa tccggtcgaa aacaagttcg gcgccctcgc cccgatctac ggcaccctgg
     1621 tcaccgcgct gatcgcgatg gtcatcgccg tgccggtcag cttcggcatc gccttcttcc
     1681 tcaccgaagt cgcgccgcgc tggctgcgtg gcccggtcgg taccgccatt gaactgctgg
     1741 ccggcatccc ctcgatcatc tacggcatgt ggggcctgtt cgtgctggtg ccggtgatga
     1801 ccgagtacgt caccccgttc ctcaacgaaa ccctgggcga gtggccgatc atcggcccga
     1861 tgttccaggg cccgccgctg ggcatcggca tgctcaccgc cggtttcgtg ctggccatca
     1921 tggtcattcc attcatctct tcagtgatgc gcgaagtgtt cctgaccgtg ccgacccgcc
     1981 tgaaggagtc ggcctacgcg ctgggctcca ccaagtggga agtaagctgg gacatcgtgc
     2041 tgccctacac ccgctcggcg gtgatcggcg gcatcttcct cggcctcggc cgcgccctgg
     2101 gtgaaacgat ggcagtggcc ttcgtgatcg gcaacagcgt gcgcctgtcg ccgtcgctgc
     2161 tggagccggg caccaccatc gccgcgctga tcgccaacga tttcggcgaa gccactgaaa
     2221 cctaccgctc ggccctgctg ctgctcggct tcgtcctctt catcgtcacc ttcgtggtgc
     2281 tggccatcgc ccgcctgatg ctgatgcgcc tgtcccgcaa ggagggcaac tgatgtccac
     2341 caccgctgat tcgctgtacc tgcgccgccg catcggcaat gtcgttgcca tcaccgcgtc
     2401 ctgcgccacc gccctgttcg gcctgttctt cctgggctgg atcctgttca ccctggcctc
     2461 caagggcctg gccggcatca acctggatct gttcaccaag atgacgccgc cgccgatgca
     2521 ggaaggcggt cttgccaacg ccttcttcgg cagcgccgtg atgtgtgcgc tggcgatcgg
     2581 catcggcacc ccgctgggcg tgctggccgg tacctggctg gccgagtacg gcaacgcccg
     2641 caaggccggc accgtggtcc gcttcgtcaa cgacatcctg ctgtcggcgc cgtcgatcgt
     2701 gctcggcctg ttcgtctaca ccctgtacgt gatgcagacc ggcggcaact tctcggcatt
     2761 cgccggtgcg ctgtcgctgg ccttcatcgt gctgccggtg gtggtgcgca ccaccgacga
     2821 aatgctgcgc ctggtgcctt cgcagatgcg cgaagccgcg ctttcgctgg gcatcccgca
     2881 gtggaaggtg atcgtgcagg tgctgtaccg cagcgcgtcg gccggcatca tcaccggcat
     2941 cctgctggcg ctggcgcgca tttccggcga aaccgccccg ctgctgttca ccgccttcgg
     3001 caaccagtac tggaacaaca acatcttcca gccgatggcc tcggtgccgg tggtgatgaa
     3061 ccagttcgcc ggcagcccgt atgaatcctg gcaggtgctg gcctgggccg gtgccctggt
     3121 gctgactgtc ttcgtgttgc tggtcagcct tgccgcccgc ggcatcctgc tgcgcaaccg
     3181 tatctcccat gactgacctt tccgtggata acgccatgaa cgacctttcc aatgccgtgc
     3241 cgatgcagcg catcgccgtg ccgtcctcgc acgagagcct gcacacgccg tcgccggtca
     3301 agctggccgc gcgtggactg gacttctact acgacaagtt ccacgccctg aagggcatca
     3361 acctggagat tccggaaaag cgcgtgaccg cgctgatcgg tccgtccggt tgcggcaagt
     3421 cgaccctgct gcgcatcttc aaccgcatct acgcgctgta cccgaagctg gaagcgcgcg
     3481 gtgaggtgct gctggacggc gagaacatcc tgtcgccgaa gtacccgatg aaccgcctgc
     3541 gcagcaaggt cggcatggtg ttccagaagc cggtgccgtt cccgatgacc atcttcgaga
     3601 acgtggccta cggcatccgc caccacgaga agctgagcaa ggccgacatg gccgaccgcg
     3661 tcgagcaggc gctgcgccag ggcgcgctgt gggacgaagt gaaggacaag ctgggccaga
     3721 gcgcgctggg cctgtccggt ggccagcagc agcgcctgtg catcgcccgt gccgtggccc
     3781 tgcgcccgtc ggtgctgctg ctggacgagc cgacctcggc gctggacccg atctcgacca
     3841 gccgcatcga gcagctggtg gaagagctca agcacgagta caccatcgtc atcgtcaccc
     3901 acaacatgca gcaggccgcg cgcgtgtccg actacaccgc cttcatgtac ctgggcgacc
     3961 tgatcgagca cgaccgcacc gaagtgatct tctcgcagcc gtcgcagcgg cagaccgagg
     4021 actacatcac cggtcgcttc ggctgaaacg tcagtcgagc gtggctcgac tctacagaca
     4081 acggcagtcg agcatggctc gactctacag agtggaacaa ccatgaacct tcccaacgac
     4141 cacatcgtca agagctacga cgaagagcag cagcgcctgg tggccgaaat cgtgcgcatg
     4201 ggcgagatgg ccgtcgccca gctcgaagcg gcgatggacg tgatcgagaa gcgcgacgag
     4261 aacgccgccc atcgcatcat cgccaacgat gaagccatcg acgcgctgga acagcagatc
     4321 agccacgacg tgatgcgcct ggcgctgcgc gggccgatgg cccgcgacct gcgcgagatc
     4381 ctggccggcc tgcgcatccc ggccgacatc gagcgcatcg gcgactacgc ggccaatgtc
     4441 gccaagcgtt cgatcgcact gggcaaggta ccgccgctgc cgcagatcca gggcctgcgt
     4501 gcgctgggcc gcctggccgc gcagcaggtg cgccgcgcca tcgccgccta ccgcgacaac
     4561 gacgccgacg ccgcactggc gctgcgtgag gacgacgccc gcctggacgc gcagtacacc
     4621 gcgctgttcc gcgagctgct gacctacatg atggaagacc cgcgcaacat cactccgtgc
     4681 acccatctgc tgttcatggc caagaacctg gagcgcgtgg gcgaccacgc caccaacatc
     4741 gccgagaacg tgtggttcct ggtgcacggc gagcagccgc tgccgccgcg cgaaaagcgc
     4801 gacgagacct ccagcaccgg ccagccctga cgctgcactg caacacg
//
LOCUS       DAOKIP010000256         4749 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.257,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000256 DAOKIP010000000
VERSION     DAOKIP010000256.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 4749)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4749)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4749
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.257"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(43..372)
                     /locus_tag="QEL58_003634"
     CDS             complement(43..372)
                     /locus_tag="QEL58_003634"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3325 domain-containing protein"
                     /protein_id="HDS1678060.1"
                     /translation="MMLLALALSFSAFTALSLAMEKHQHDLHGKAAASPARRTQWRVL
                     GWALLAVAFALCVADHGWAMGPVLWLGTMTLGGAVLSFGLYPYRPKWIAALAITLPAA
                     GLLVALL"
     gene            complement(369..2006)
                     /locus_tag="QEL58_003635"
     CDS             complement(369..2006)
                     /locus_tag="QEL58_003635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY domain-containing protein"
                     /protein_id="HDS1678061.1"
                     /translation="MKNGFRQSMAWLHTWTGLLVGWLLLLIFMAGTASYYREEISRWM
                     RPELPANKVSIDVAAQRAVDYLQANASQAENWFVTLPQPRNPAMQMFWRLPPELADPS
                     RGRRGGFGDATLDPNTGQALKARETRGGDFFYRLHFDLHYIPVLWARYLVGFCAMFML
                     VAIITGVITHKKIFKDFFTFRKDKGLRSWLDFHNVSAVMALPYHAMITYTGIVTLMIM
                     YLPWGVKVAYPQDEDKFFSEAFGGMPEVTAPAEGRATPLPIAQLLDSARAHWHGVEVA
                     GFTVSNPGAANAVIDIRQRDGRRLSTDTPALRYDMINGTLLEETPPSGGATATRGVLY
                     GLHLARFADWGLRALFFLSGLVGCLMVASGVVLWAVKERPKHAKSGRIGFGLRLVDAL
                     NIGTVAGLPIAFAAYFWGNRLLPLDIAERSSAEANVFFYAWGAALLAAFIWPKRMMWA
                     WQLYLGAAAFALVPVVNALTTHAHLGVTLRNGDWVLAGVDLSMIAFGAMLALCGWRMQ
                     RWTPPLSAAEKKKRAAAAAAPKAPVDAAEAVEAEASA"
     gene            complement(2003..2317)
                     /locus_tag="QEL58_003636"
     CDS             complement(2003..2317)
                     /locus_tag="QEL58_003636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019336682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3649 domain-containing protein"
                     /protein_id="HDS1678062.1"
                     /translation="MDRSPATASPRTFFSNPRWGVLSRSLAAIFGGYALASVTSVFCA
                     LALPGARGQTVLTGMLLAILVAACAALWAFATRTALRAWVGILVPTLLMAVVARLLGA
                     WA"
     gene            complement(2425..4626)
                     /locus_tag="QEL58_003637"
     CDS             complement(2425..4626)
                     /locus_tag="QEL58_003637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010486185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent siderophore receptor"
                     /protein_id="HDS1678063.1"
                     /translation="MAMPLNSPRPTVLALAVTALMIAPLAHADGTADPSARTLDTVKV
                     TADGEMPSSYTVKGARTATKLDLSLRETPQSVTVVTRQRLDDMGLFSLSDVMGQVTGV
                     SVSVTDSERINYVSRGYTIDNFQIDGMLNTFGGSIKTNTDNVIYERIEVIRGATGLTT
                     GAGDPSGTISMIRKRPTDTFQMGANLTLGRWGNRRLEADLGGPVAWDGRIRARVVAAK
                     QQSDSFRDVYALDKDVFYGIVQADLSDSTLFEVGYEYQSPRTTGVTWGVVPYWGADGA
                     PANLPRSTNLSASWSAWPIVEKTSFARLEQQLGNGWSVKGNLSHAVRDTDGSVWYGAA
                     GYPRADGTGVTAYISHFNEHSTMDVFDVNVGGPFQLFGREHELVFGLGQSVRKGESEA
                     MSFDSSAPGYAQVPDWRHWTGEVPVLPVTRLGRLSSQDELRQRAAYVAARLRLADPLL
                     AVVGARYGSWETRKWTYGYDANGNRNSITRTGYRPDDMLTPYAGLVYDFNSIFSGYVS
                     YTDIFKPQNYRDRNGNYLEPVVGDMYEAGIKAEFFGGLLNASAAVFEGKQDNVAEIDD
                     SVPVNSLPDGSQAYRSTGKGNKVKGWEIETQGSIGEQWNVSAGFAHTVIRNKDGVLQR
                     TTAPQDTFRLNTSWRPGGIDGRFWLGGGVTWQSRIWSTSTKPDRSKANITQDAFYLVN
                     LAGGYRFNENFSAQLNINNLLDKKYFNNVGFYNGVYWGEPRNVTMTLRWKL"
BASE COUNT          809 a         1569 c         1603 g          768 t
ORIGIN      
        1 tggatgggtg ttcagtagat ccacgccatg cgtggatggc ggctacagca acgccaccag
       61 cagcccggcc gcgggcagcg tgatcgccag ggcggcgatc cacttcggcc ggtacgggta
      121 caacccgaac gacaacaccg cgccgcccag cgtcatcgtg cccagccaca gcaccgggcc
      181 catcgcccag ccgtggtcgg ccacgcacag cgcgaacgcc accgccagca gggcccatcc
      241 cagcacccgc cattgcgtgc gccgtgccgg cgaggcagcc gccttgccat gcaggtcgtg
      301 ctggtgcttc tccatcgcca gcgacagcgc cgtgaacgca gagaacgaca aggccaatgc
      361 cagcagcatc atgcgctggc ctccgcttca acagcttccg cagcatcaac cggagccttg
      421 ggcgctgccg ccgccgcggc acgcttcttc ttctcggcgg cagacagcgg cggcgtccag
      481 cgctgcatgc gccatccaca caatgccagc atcgcaccga acgcgatcat cgacaggtcg
      541 acgccagcca gcacccagtc accattgcgc agggtcacgc ccagatgcgc gtgcgtggtc
      601 agcgcgttga ccaccggcac cagtgcgaac gcggcggcgc ccaggtacag ctgccacgcc
      661 cacatcatcc gcttcggcca gatgaaggcg gccaacagtg ccgcgcccca ggcgtagaag
      721 aacacgttgg cctcggcact ggagcgttcg gcaatgtcca gcggcagcag gcggttgccc
      781 cagaagtagg cggcgaacgc gatcggcagg ccggccacgg tgccgatgtt cagtgcgtcg
      841 accaggcgca ggccgaagcc gatgcggccg ctcttggcgt gcttgggccg ttccttcact
      901 gcccacagca ccacgccgct ggccaccatc aggcagccga ccaggccgga caggaagaac
      961 agtgcgcgca ggccccagtc ggcgaagcgg gccaggtgca ggccatacag cacgccacgg
     1021 gtggcggtgg caccaccgga gggcggcgtc tcttccagca gcgtgccgtt gatcatgtcg
     1081 tagcgcagcg ccggggtgtc ggtggacagg cgcctgccgt cgcgctggcg gatgtcgatg
     1141 actgcattgg ccgcgcccgg gttggatacg gtgaagccgg ccacttcgac gccatgccag
     1201 tgcgcacgcg cgctgtccag cagctgcgcg atcggcagcg gcgtggcgcg tccctcggcc
     1261 ggcgcggtca cctccggcat gccgccgaag gcttcgctga agaacttgtc ctcgtcctgc
     1321 gggtaggcca ccttcacccc ccacggcagg tacatgatca tcagggtgac gatgccggtg
     1381 taggtgatca tcgcgtggta gggcagtgcc atcaccgcgc tgacgttgtg gaaatccagc
     1441 cacgaccgca ggcccttgtc cttgcggaag gtgaagaagt ccttgaagat tttcttgtgg
     1501 gtgatgacgc cggtgatgat cgccaccagc atgaacatcg cgcagaagcc gaccaggtag
     1561 cgcgcccaca gcaccgggat gtaatgcagg tcgaagtgca ggcggtagaa gaaatctccg
     1621 ccacgcgtct cgcgcgcctt cagggcctgg ccggtgttcg ggtccagcgt ggcatcacca
     1681 aagccaccgc gacggccacg gctgggatcg gccagctccg gcggcagccg ccagaacatc
     1741 tgcatggccg ggttgcgcgg ttgcggcagg gtgacgaacc agttctcggc ctggctggcg
     1801 ttggcctgca ggtagtccac cgcgcgctgc gcggccacgt cgatgctgac cttgttggcc
     1861 ggcagctccg ggcgcatcca gcggctgatt tcctcgcggt agtagctggc ggtgccggcc
     1921 atgaagatca gcagcagcaa ccagccgacc agcaggccgg tccaggtgtg cagccaggcc
     1981 atcgattggc ggaatccgtt cttcatgccc aggcccccag caggcgcgcg acgacggcca
     2041 tcagcagggt ggggaccagg atgccgaccc aggcgcgcag cgcagtgcgg gtggcgaacg
     2101 cccacaacgc ggcgcaggcg gccaccagga tcgccagcag catgccggtc aacacggtct
     2161 ggccgcgcgc gccgggcagc gccagggcgc agaacacgct ggtcaccgag gccagcgcgt
     2221 agccgccgaa gatcgcggcc agcgagcgtg acagcacgcc ccaacgcggg ttggagaaaa
     2281 aggtgcgggg gctggcggtt gcgggcgagc ggtccacggc attcctgctg gtttcagtga
     2341 aaagggaccg gcgcaccgca gcgcgccggg ggtggccatc cgtggccggg caccggtcgc
     2401 agaaccggtg ccatccatcg ggggtcagag cttccagcgc agcgtcatcg tcacgttgcg
     2461 tggttcgccc caatacacgc cgttgtagaa accgacgttg ttgaagtact tcttgtccag
     2521 caggttgttg atgttcagct gcgcgctgaa gttctcgttg aagcggtagc cgccggcgag
     2581 gttgaccagg tagaacgcgt cctgggtgat gttggccttg ctgcgatcgg gcttggtgct
     2641 ggtgctccag atgcggctct gccaggtcac gccaccgccc agccagaagc ggccatcgat
     2701 accgccgggg cgccagctgg tgttgagccg gaaggtatcc tgcggtgcgg tggtccgctg
     2761 cagtacgccg tccttgttgc ggatgacggt gtgggcgaag ccggccgaga cgttccactg
     2821 ctcgccgatg ctgccctggg tttcgatctc ccagcccttc accttgttgc ccttgccggt
     2881 ggagcggtag gcctggctgc catcgggcag ggagttcacc ggcaccgaat catcgatctc
     2941 ggcgacgttg tcctgcttgc cctcgaacac ggcggcggag gcattgagca ggccgccgaa
     3001 gaactcggcc ttgatgcctg cttcgtacat gtcgccgacc accggctcca gataattgcc
     3061 gttacggtcg cggtagttct gcggcttgaa gatgtcggtg tagctgacat aaccgctgaa
     3121 gatcgaattg aagtcgtaga ccaggccggc atacggagtg agcatgtcgt ccggccggta
     3181 gccggtgcgg gtaatgctgt tgcggttgcc gttggcgtcg tagccatagg tccacttgcg
     3241 ggtttcccag ctgccatagc gggcgcccac cacggccagc aacggatcgg ccaggcgcag
     3301 gcgagccgct acataggcgg cgcgctggcg cagttcgtcc tgtgacgaca ggcgaccaag
     3361 gcgggtcacc ggcagtaccg gcacctcgcc ggtccagtga cgccagtcgg gcacctgcgc
     3421 gtagcccggt gcgctggaat cgaacgacat ggcctcggac tcacccttgc gcaccgactg
     3481 gcccaggccg aacacgagtt catgctcgcg cccgaacagc tggaacggcc cgcccacgtt
     3541 gacgtcgaac acgtccatcg tgctgtgttc gttgaagtgt gaaatgtagg cagtcacacc
     3601 ggtaccgtcg gcgcgcgggt agccggccgc gccgtaccag acgctgccat cggtatcgcg
     3661 cacggcatgg ctgaggttgc ccttcaccga ccagccgttg cccagttgct gttccagtcg
     3721 cgcgaagctg gtcttttcca cgatcggcca cgcactccac gaggccgaca gattggtcga
     3781 gcgtggcagg ttggccggcg cgccatcggc gccccagtac ggcaccacgc cccaggtcac
     3841 gccggtggtg cgcggcgact ggtactcgta gcccacctcg aacagcgtgc tgtcactcag
     3901 gtcggcctgc acgatgccgt agaacacgtc cttgtccagc gcatagacat cacggaacga
     3961 atcgctctgc tgcttggccg cgaccacgcg cgcacggatg cggccgtccc aggccacggg
     4021 gccgccgagg tcggcttcca ggcgacggtt gccccagcgg ccgagggtca ggttggcacc
     4081 catctggaaa gtgtcggtcg gccgcttgcg gatcatgctg atggtgccgg acggatcacc
     4141 cgcgccggtg gtcaggccgg tggcgccgcg gatcacttcg atgcgctcgt agatcacgtt
     4201 gtcggtgttg gtcttgatcg agccaccgaa ggtgttgagc atcccgtcga tctggaagtt
     4261 gtcgatggtg tagccgcgcg agacataatt gatgcgctcg ctgtcggtga ccgacacgct
     4321 gacgcccgtc acctggccca tcacgtcgga cagggagaac aggcccatgt catccaggcg
     4381 ctggcgggta accaccgtca ccgactgtgg cgtctcgcgt agtgacaggt cgagcttggt
     4441 cgcagtgcgc gcgcctttca ccgtatagct gctgggcatc tcgccatcgg cagtcacctt
     4501 caccgtatcc agcgtgcgcg cggaaggatc ggcagtgccg tcggcgtggg ccagcggggc
     4561 gatcatcaat gcagtcacgg ccagggccaa cacggtggga cggggggagt tcagcggcat
     4621 tgccatcggt gcggttccat gcaggacgaa tcaggcgatg gaatacgcag gtacagtcgc
     4681 catgcgctcc gcgcacgtcg cccagcgagc cccatcgacg gtgcgccacc cgcgcagtgc
     4741 gggtgaccc
//
LOCUS       DAOKIP010000257         4734 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.258,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000257 DAOKIP010000000
VERSION     DAOKIP010000257.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 4734)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4734)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4734
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.258"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..1914)
                     /locus_tag="QEL58_003638"
     CDS             complement(<1..1914)
                     /locus_tag="QEL58_003638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017171666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme lyase CcmF/NrfE family subunit"
                     /protein_id="HDS1678064.1"
                     /translation="MLPELGQILLLCALLASLLQAGLPLAGAHRNNPAWMAVARPAAF
                     AQLLLVAGAFAVLTAAFVQQDFSVRYVAENSNSLLPMIYRYSAVWGAHEGSLLMWALV
                     LALWTGAVAAFSRHLPAPVQARVLAVMGVVSVGFLAFLIFTSNPFLRLNPAPLEGRDL
                     NPLLQDPGLIIHPPMLYLGYVGFAVPFAFAVAALLEGRVDARWLRWTRPWTNVAWGFL
                     TLGIALGSWWAYYELGWGGWWFWDPVENASFMPWLVGAALIHSQAVTEKRGTFGSWTL
                     LLAIAAFALSLLGTFLVRSGVLTSVHSFAADPSRGLFILVFLSVLVGGSLLLYALRAS
                     QLSVDADDPRRGFTATSRETLLLANNLLLATACAMVLLGTLYPLLADALSLGKISVGP
                     PYFGSLFLLLMAPMILLLPFGPLVKWQRDQPSRAFALLAPWLALAIVLGALAWWQAPQ
                     NGWKAGLGVAAAAWVGFGTARFVWQRLRGNGRFTAEMLGMIVAHAGIALFLAGALLVE
                     ALNVQREVALAPGQQLVVGRHEVRFEGVDHREGPNFIADRGHLRVFRNGRELALLHPE
                     KRQYASGGQVMTEAGIDARFEGDVYVALGEPLGNNAWAVRVHIKPFVRWIWLGALLMA
                     LGGFITAADRRFRR"
     gene            complement(1915..2376)
                     /gene="ccmE"
                     /locus_tag="QEL58_003639"
     CDS             complement(1915..2376)
                     /gene="ccmE"
                     /locus_tag="QEL58_003639"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014647764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c maturation protein CcmE"
                     /protein_id="HDS1678065.1"
                     /translation="MTPVQRRRLAWVLLALLASGLATALVAMALERNIAYLYTPAEVL
                     RGDVDAQSRFRLGGMVVKGSFNRPVGSLEARFEVTDGDAQLPVTTSRILPDMFAEGTA
                     VVASGRLQDGVFVADEVLAKHDEKYVPKEVADKMGDAHRKHDVPVTAPEVR"
     gene            complement(2373..2561)
                     /locus_tag="QEL58_003640"
     CDS             complement(2373..2561)
                     /locus_tag="QEL58_003640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019336397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme exporter protein CcmD"
                     /protein_id="HDS1678066.1"
                     /translation="MTHLQYVIGAYAVFVLVLGADAIGSWLRLRVARRLALARQQRQQ
                     TRAGRQDAAAPLSTELER"
     gene            complement(2558..3328)
                     /gene="ccsA"
                     /locus_tag="QEL58_003641"
     CDS             complement(2558..3328)
                     /gene="ccsA"
                     /locus_tag="QEL58_003641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005417651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein CcsA"
                     /protein_id="HDS1678067.1"
                     /translation="MNPIVRWFHQLGSPPTFDRFAARWSRVFYLAAVPVLLVGMWQAL
                     LVVPPEAKQLDSFRILYIHVPSAWMSLFVFALMALYAAIALIWRIKVCEILAMACAPM
                     GAGFTLITLLTGSIWGKGTWGTWWDWDPRMTSELVLLFLYLGVIGLYHAIEDRRSAAR
                     AAGLLAIVGVSLLPVIRYSVDWWGGLHQRQSINVFGESAISSAMIAPLWWMVIGTKFW
                     FAGSVLAKARADNLDREAGKAWVGGRVDATRPAREAQP"
     gene            complement(3372..4067)
                     /gene="ccmB"
                     /locus_tag="QEL58_003642"
     CDS             complement(3372..4067)
                     /gene="ccmB"
                     /locus_tag="QEL58_003642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005417647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme exporter protein CcmB"
                     /protein_id="HDS1678068.1"
                     /translation="MIAPGTEPGLWQTAGALLKRDLRLLWRRRGDALQPLLFAVLVVV
                     LFALAQGREPQLLAATAGAVLWLAVLLAGQLSLDSLFRSDAEDGSLEQWLLAPVPLAW
                     LVLVRVLLHWATTALPLIVVSPLLAEMLHLPHDQLPMLLASLLLGTPLLSLIGGVVAA
                     LTVGIRRSGILVALLSLPLYVPVLVFGAGSLAAAGRGQDPVSALLMLGAGLLVALVLA
                     PLATAAAIRISLS"
     gene            complement(4064..4693)
                     /gene="ccmA"
                     /locus_tag="QEL58_003643"
     CDS             complement(4064..4693)
                     /gene="ccmA"
                     /locus_tag="QEL58_003643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme ABC exporter ATP-binding protein CcmA"
                     /protein_id="HDS1678069.1"
                     /translation="MNTPALLAASGLSFSRNDEPVFGPLDFHVDAGEALLVQGGNGAG
                     KTTLLRVLAGLARPGAGQVRIDGKPASTAERARYVAYLSHLPALKPDLDTLENLHFLC
                     GLHGRRARQMPGNALAIVGLAGYEDTLVRHLSAGQKRRLALARIWLSPAPLWLLDEPY
                     ANLDLEGITLVNRMISAHLRAGGAALVTTHGAYAAPPVRTRQLDLGGAA"
BASE COUNT          876 a         1652 c         1612 g          594 t
ORIGIN      
        1 acgacggaaa cggcggtcgg cggcggtgat gaatccgccc agggccatca gcagcgcgcc
       61 cagccagatc cagcgcacga acggcttgat gtgtacccgt accgcccatg cattgttgcc
      121 cagcggctcg cccaatgcca cgtagacatc accttcgaag cgtgcgtcga tgccagcctc
      181 ggtcatcacc tggccaccgc tggcgtactg gcgcttctcc ggatgcagca gcgccagctc
      241 gcggccgttg cggaacaccc gcagatggcc gcggtcggcg atgaaattgg ggccttcgcg
      301 atggtccacg ccttcgaagc gcacttcatg gcggccgacc accagctgct ggcccggtgc
      361 cagcgccact tcacgctgca cattcagcgc ttccaccagc aaggcgccag ccaggaacaa
      421 cgcgatgccg gcgtgggcga cgatcatgcc gagcatctcg gcggtgaagc ggccgttgcc
      481 gcgcagccgc tgccagacaa aacgcgcggt accgaacccg acccaggccg ctgcggccac
      541 gccgaggccg gccttccagc cattctgcgg cgcctgccac caggccagcg cgccgagcac
      601 gatggccagt gccagccacg gtgccagcag cgcgaaggca cgcgagggtt ggtcgcgctg
      661 ccacttcacc agtgggccga acggcagcag caggatcatc ggtgccatca gcagcaggaa
      721 caggctgccg aagtagggcg ggccgaccga gatcttgccc agcgacagtg catcggccag
      781 cagcgggtac agcgtgccca gcagcaccat cgcgcaggcg gtggccagca gcaggttgtt
      841 ggccagcagc agggtttcgc gcgaggtggc ggtgaagccg cgacgcggat cgtcggcgtc
      901 cacgctcagc tggctggcgc gcagcgcata cagcagcagg ctgccaccga ccagcaccga
      961 caggaacacc aggatgaaca ggccgcgcga gggatcggcg gcgaacgaat gcacgctggt
     1021 cagcacgccg gagcgcacca ggaacgtacc cagcagcgac agcgcgaagg cggcgatcgc
     1081 cagcagcagg gtccagctgc cgaaggtacc gcgcttttcg gtgaccgcct gcgagtggat
     1141 cagtgccgca ccgaccagcc acggcatgaa gctggcgttc tccaccgggt cccagaacca
     1201 ccagccgccc cagcccagct cgtagtaggc ccaccagctg ccgagcgcga tgcccagggt
     1261 caggaagccc caggcgacgt tggtccaggg ccgcgtccag cgcagccagc gcgcgtcgac
     1321 gcggccttcc agcagcgccg ccaccgcgaa cgcgaacggt accgcgaagc cgacgtagcc
     1381 caggtacagc atcggcgggt ggatgatcag ccccgggtcc tgcagcagtg ggttgaggtc
     1441 gcggccttcc agtggcgccg gattcaggcg caggaacggg ttggaggtga agatcaggaa
     1501 ggcgaggaag ccgacgctga ccacacccat caccgccagt acgcgcgcct gcaccggtgc
     1561 cggcaggtgc cgcgagaacg ccgccactgc gccggtccac agcgccagta ccagcgccca
     1621 catcagcagc gagccctcgt gcgcacccca aaccgccgaa tagcggtaga tcatcggcag
     1681 cagcgaattg gagttctcgg ccacgtagcg caccgagaaa tcctgctgca cgaatgcggc
     1741 ggtgagcacg gcgaacgcgc cggcgaccag cagcagctgg gcgaaggcgg ccggtcgcgc
     1801 caccgccatc caggccgggt tgttgcgatg cgcgcccgcc agcggcaggc cagcctgcag
     1861 cagcgaggcc agcaacgcgc acaacagcag gatctgaccc agttcgggca gcactcagcg
     1921 cacctcgggt gccgtcaccg gcacgtcgtg cttgcgatgg gcatcgccca tcttgtcggc
     1981 cacttccttc ggcacgtact tctcatcgtg cttggccagc acttcgtcgg cgacgaagac
     2041 gccgtcctgc agccggccac tggcgaccac ggcggtgcct tcggcaaaca tgtccggcag
     2101 gatccgcgag gtggtcaccg gcagctgtgc atcgccgtcg gtcacttcga agcgcgcctc
     2161 cagcgagccg accgggcggt tgaaggagcc cttcaccacc atcccgccga ggcggaagcg
     2221 cgactgcgca tcgacatcgc cgcgcagcac ttctgcgggg gtgtacaggt aggcgatgtt
     2281 gcgctccagc gccatcgcca ccagtgcggt ggccaggccg gaggcgagca gggccaacag
     2341 cacccaggcc aggcggcgac gctgaaccgg ggtcatcgtt ccagctccgt tgacagcggc
     2401 gcggccgcgt cctgccggcc ggcacgggtc tgctggcgct gctgccgggc cagggccaag
     2461 cggcgcgcca cgcgcaggcg cagccacgag ccgatggcgt cggcgccaag taccagcacg
     2521 aacacggcgt aggcgccgat cacatattgc aggtgggtca tggctgggcc tcccgggccg
     2581 ggcgcgtggc atcgacgcga ccgccgaccc aggccttgcc ggcctcgcgg tcgaggttgt
     2641 cggcgcgcgc cttggccagt accgaaccgg cgaaccagaa cttggtgccg atcaccatcc
     2701 accacagcgg cgcgatcatc gcgctgctga tcgccgattc accgaacacg ttgatcgact
     2761 ggcgctggtg caggccaccc caccagtcca ctgaatagcg gatcaccggc agcaggctga
     2821 cgccgacgat ggccagcagg ccggccgcgc gcgcggcgct gcggcgatcc tcgatggcgt
     2881 ggtacaggcc gatcacgccc aggtacagga acagcagcac cagctcactg gtcatgcgcg
     2941 ggtcccagtc ccaccaggtg ccccaggtgc ccttgcccca gatgctgccg gtcagcaggg
     3001 tgatcagggt gaagccggca cccatcggtg cgcaggccat ggccaggatc tcgcagacct
     3061 tgatccgcca gatcagggca atagcggcat acagcgccat cagcgcgaac acgaacaggc
     3121 tcatccaggc actgggcaca tggatgtaga ggatgcggaa gctgtccagc tgcttggctt
     3181 ccggtggcac caccagcagc gcctgccaca tgccgaccag cagcaccggt accgcggcga
     3241 gatagaacac ccgcgaccag cgggcagcga atcggtcgaa cgtggggggc gagccgagtt
     3301 ggtggaacca gcggacaatc ggattcatgc gtggcggcta tccagcaggg gtggattggc
     3361 tctcagctcg gtcaactcag agaaatgcgt attgcagcgg cggtggccag cggagccagc
     3421 accagcgcga ccagcaggcc ggcgcccagc atcagcagcg cactgaccgg atcctgtccg
     3481 cgtccggctg ccgccaggct gcctgcgccg aacaccagca ccggcacgta cagcggcaac
     3541 gacagcaacg ccacgagaat accagagcgt cggatgccta cggtcagcgc ggcgaccacg
     3601 ccaccgatca ggctcagcaa cggcgttccc agcagcaacg atgccagcaa catcggcagc
     3661 tggtcatgcg gcagatgcag catttccgcc agcaacgggc tgaccacgat caacggcagg
     3721 gcggtggtgg cccaatgcag cagcacgcgc accagcacca gccacgccaa cggtaccggc
     3781 gccagcagcc attgctccag cgagccgtct tcggcatcgg aacggaacag cgaatccagc
     3841 gacagctggc cggccagcag caccgccagc cacagcaccg caccggcggt ggcggccagc
     3901 agctgcggct cgcggccctg ggccaatgcg aacaacacca ccaccagcac ggcaaacagc
     3961 agcggctgca gtgcatcgcc gcgacggcgc cagagcaggc gcaggtcgcg cttgagcagt
     4021 gcgcctgcgg tctgccacag gcctggttcg gtgcccggcg cgatcatgcg gcaccgccga
     4081 ggtcgagctg gcgggtgcgt accggcggcg cggcataggc gccatgggtg gtgaccagcg
     4141 ccgcgccccc ggcgcgcaga tgcgccgaga tcatccggtt gaccagagtg atgccctcca
     4201 ggtcgaggtt ggcgtagggt tcgtcgagca gccacagcgg tgcgggcgac agccagatgc
     4261 gcgccagcgc caaccgccgc ttctgcccgg cggacaggtg acggaccagg gtgtcctcgt
     4321 agccggccag gccgacgatg gccagcgcgt tgccgggcat ctgccgtgca cggcggccgt
     4381 gcaggccaca caggaagtgc aggttctcca gcgtatccag atccggcttc aaggccggca
     4441 gatggctgag gtaggcgacg tagcgcgcgc gctcggcagt gctggccggc ttgccgtcga
     4501 tccgcacctg gcccgcgccg ggccgggcca ggccggccag cacgcgcagc agggtggtct
     4561 tgccggcgcc attgccgcct tgcaccagca gggcttcgcc ggcgtccacg tggaagtcca
     4621 gcgggccgaa cacgggctcg tcattgcggg agaagctcag gccgctggcg gccagcaatg
     4681 caggggtgtt caaggggcag ggatcttcat gccggagtgc ggcggcaatt gtag
//
LOCUS       DAOKIP010000258         4723 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.259,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000258 DAOKIP010000000
VERSION     DAOKIP010000258.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 4723)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4723)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4723
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.259"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(25..795)
                     /locus_tag="QEL58_003644"
     CDS             complement(25..795)
                     /locus_tag="QEL58_003644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014039034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease"
                     /protein_id="HDS1678070.1"
                     /translation="MDNNAPLPAGDVPAPRNDRSRILRAFNVSLAAVLVLVAVFALQG
                     TFDWRPWAVAPLEVKGLLGLVGGPMLHASVEHIAANSIAILILGTLAGSVYPKATVRA
                     LPLLWLGSGLGAWMLGNPGSVHLGASGVTHGLMFLLASLGLLRRDRAAIATGLIGMLF
                     YGGMLMTVLPHADGVSWQSHMGGAFAGIIAALLFRNADPLPPRQRYSWEDEEDEAEAL
                     ADDELEPPSPQRVPVLWQPREGQDYVVIPFRRPDDPRG"
     gene            complement(902..1864)
                     /locus_tag="QEL58_003645"
     CDS             complement(902..1864)
                     /locus_tag="QEL58_003645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019658790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HDS1678071.1"
                     /translation="MQTIGNVWLWGGFAAVVVIALLVDLVLMRHGGPHKVTFKEALWW
                     SIGWVALALLFNAGLWYYLNETAGQVVANKVGLEFLTGYLVEKALAVDNIFVFLMIMS
                     YFAVPEEQRQKVLIIGILGAIVLRTIMIFAGSVLISQFHWLLYVFGAFLLFTGWKMWF
                     AAGQEPDLETNPALRWMRKHLRLLPDYAGNALSVKRDGVRWFTPLFAVLILIAVTDVI
                     FAVDSIPAIFAITTDPFIVLTSNVFAVLGLRAMFFLLAGMADRFHLLPYGLALVLGFI
                     GIKMMIIDLFKIPTPVSLGVVAVIIAATVVLSLKYPPKEGSGHA"
     gene            2155..3324
                     /locus_tag="QEL58_003646"
     CDS             2155..3324
                     /locus_tag="QEL58_003646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008264547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent rRNA methyltransferase"
                     /protein_id="HDS1678072.1"
                     /translation="MNTPLPIVRLKNAWRSSHPWIFQKLVEKPTVRPKPGSIVDVVGI
                     DGEFIGRGFYNGHSRIAVRILETDPNVPVDAGWFSRKIAQAVSLRREVLKLDAVSDAW
                     RVVHSEGDGLSGLVVDRYGDLVVVEFFAAGMFRHREWIYDALREQFPGCRFHSFADEH
                     VQKQESFDFHGNTTTEAAVITEYGIKFRADPAGAHKTGFFADQRENREWLSQQVEGKS
                     VLDLCCNTGGFAVYAAARGASDVVGIDIDEDVIQIAKGNSRLNNVRPKFVQSDIFPWL
                     RDAANRGEQYDVVILDPAKMTRDRDQVITALKKYLDMNKLALGVVKPGGLFATFSCTG
                     LVAEDQFLDMLRRAAYFSGRTIQILKVAGAGPDHPFMAHVQESRYLKAVFCRVVD"
     gene            3483..4721
                     /locus_tag="QEL58_003647"
     CDS             3483..4721
                     /locus_tag="QEL58_003647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019184039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptidase"
                     /protein_id="HDS1678073.1"
                     /translation="MTLRSLSLLVSLALCAPLSAHAVEFSAQELARAKVLQQRLVTLD
                     SHLDTPANFGRSGFDIEQRHDRNALSQVDYPRMVEGALDGGFWAIYTDQGDRSAAAHL
                     AERDHGLQRLLEIREMLAANPERFALALTADDAARIKAAGKRVVYISMENASPLVADP
                     SLLSFYHRAGLRLLSTVHFANNEFADSATDPKGAEWKGLSPAGKELVRQAVKLGIVID
                     QSHASDAVFDDLLAMMPVPFVLSHSSAKAVYDHPRNLDDARLRKLAKAGGVIQVNAYG
                     GYLIDTAKTPERKQAEEALSKQLGGWEGMGIEQGVALLKAEQELDHEHPVRHASLDDF
                     FAHFEHILKVVGPEHVGIGLDWDGGGGLSDLPDVSQLPKITAWLLRKGYTEQQIAGIW
                     GGNLLRVMRQAQDYAAKQGG"
BASE COUNT          844 a         1556 c         1580 g          743 t
ORIGIN      
        1 accaaggtcg gcatctacca cacctcagcc gcgcggatcg tccggccgcc ggaatggaat
       61 caccacgtag tcctggccct cgcgtggctg ccacagcacc ggcacgcgct gcggtgacgg
      121 cggctccagc tcgtcgtcgg ccagcgcttc tgcctcatcc tcttcgtctt cccagctgta
      181 gcgctggcgc ggcggcaggg ggtcggcgtt gcggaacagc agcgcggcaa tgatgccggc
      241 gaaggcgccg cccatgtgcg actgccacga cacgccgtcg gcgtgcggca ggacggtcat
      301 cagcatgccg ccgtagaaca gcatgccgat caggccggtg gcgatcgccg cgcggtcgcg
      361 gcgcagcagg ccgaggctgg cgagcaggaa catcaggccg tgggtcacgc cactggcacc
      421 caggtgcacg ctgcccggat tgcccagcat ccaggcaccc aggcccgagc ccagccacag
      481 caggggcagt gcgcgcacgg tggcttttgg atacacgctg ccggccaggg tgccgaggat
      541 caggatggcg atgctgttgg cggcgatgtg ctcgaccgag gcatgcagca tcgggccacc
      601 gaccaggccg agcaggccct tgacttccag cggcgctacc gcccaggggc gccagtcgaa
      661 cgtgccctgc agggcgaaca cggccaccag caccagcacg gcggccaggc tgacattgaa
      721 cgcccgcagg atgcgcgagc ggtcattgcg gggggccggt acgtcgccgg cgggcagggg
      781 cgcgttgttg tccatacctc agcaatggcg gtggttgccg cgaaaccaag gccgccgcgg
      841 cgggagagtg gaggcggccg gcgggacaat cccgccggcc gtgccgttca gcgattcagc
      901 ttcaggcgtg gcccgatcct tccttcggcg ggtacttcag gctcagcacc acggtggcgg
      961 cgatgatcac cgcgaccacg cccagcgaca ccggggtcgg gatcttgaac aggtcgatga
     1021 tcatcatctt gatgccgatg aagcccagca ccagcgccag gccatacggc agcaggtgga
     1081 agcggtcggc catgccggcc agcaggaaga acatcgcgcg caggcccagc accgcgaaca
     1141 cgttggaggt gagcacgatg aaggggtcgg tggtgatcgc gaagatcgcc gggatgctgt
     1201 ccacggcgaa gatcacgtcg gtgaccgcga tcaggatcag taccgcgaac agcggggtga
     1261 accagcgcac gccatcgcgc ttcacgctca gtgcgttgcc ggcgtagtcc ggcagcaggc
     1321 gcaggtgctt gcgcatccag cgcagggccg gattggtctc cagatcgggc tcctggccgg
     1381 cggcgaacca catcttccag ccggtgaaca gcaggaaggc accgaacacg tagagcagcc
     1441 aatggaactg gctgatcagc acgctaccag cgaagatcat gatcgtacgc agcacgatcg
     1501 cacccaggat gccgatgatc agcaccttct ggcgctgctc ctccggcacc gcgaagtagc
     1561 tcatgatcat caggaagaca aagatgttgt cgaccgccag cgccttctcg accaggtaac
     1621 cggtcaggaa ttcgaggccg accttgttgg ccacgacctg gccggcggtc tcattcaggt
     1681 aataccagag gccggcgttg aacagcaggg ccagcgcgac ccagccgatc gaccaccaca
     1741 gggcctcctt gaaggtgacc ttgtgcggtc caccatgtcg catcaacacg aggtcgacca
     1801 gcagggcgat gaccaccacc gctgcgaagc cgccccacaa ccacacgtta ccgatcgtct
     1861 gcattgggaa tgtccgttgg aaagatgaat gccaggccgg acggcgagga tctgcaacgg
     1921 aggatcggga ggggatccag ggacagagct tcgccagtac ggcgaaggtc tcgctcgcag
     1981 ttccaatggc tggaactgcc gttgcaccgg agcctgcggg ctcgaattga cggcgacaac
     2041 gtctgggagc tactcccctt ctggcgccga ttctgccgtc tgcccgggcc gccgtcaatt
     2101 gccgcgcctg tgctggattt ccggcccccg ccgccccccg gctacaatgg gcggatgaat
     2161 accccccttc cgattgtccg cctcaagaac gcgtggcgtt ccagccaccc gtggatcttc
     2221 cagaaactgg tcgagaagcc gaccgtccgg cccaagcccg gttccatcgt cgacgtggtc
     2281 ggcatcgatg gcgagttcat tggccggggg ttctacaacg ggcattcgcg cattgccgtg
     2341 cgcatcctcg aaaccgaccc gaacgtgccg gtcgatgccg gctggttctc gcgcaagatc
     2401 gcccaggcgg tgtcgctgcg ccgtgaggtg ctgaagctcg atgcggtgtc cgacgcctgg
     2461 cgcgtggtgc acagcgaagg cgacggcctg tccggcctgg tggtcgaccg ctacggcgac
     2521 ctggtggtgg tcgagttctt cgccgccggc atgttccgcc accgcgagtg gatctacgac
     2581 gcgctgcgcg agcagttccc cggctgccgc ttccacagct tcgccgacga gcacgtgcag
     2641 aagcaggaaa gcttcgactt ccacggcaat accaccaccg aagcagcggt gatcaccgag
     2701 tacggcatca agttccgcgc cgacccggcc ggtgcccaca agaccggttt cttcgccgac
     2761 cagcgcgaga accgcgagtg gctgagccag caggtggaag gcaagagcgt gctcgacctg
     2821 tgctgcaaca ccggcggttt cgcggtgtat gcggcggcgc gtggcgcctc ggacgtggtc
     2881 ggcatcgaca tcgatgaaga cgtcatccag atcgccaagg gcaattcgcg cctgaacaac
     2941 gtgcgcccga agttcgtcca gtccgacatc ttcccgtggc tgcgtgatgc cgccaaccgc
     3001 ggcgagcagt acgacgtggt gatcctggac ccggcgaaga tgacccgcga ccgcgaccag
     3061 gtgatcaccg cgctgaagaa gtacctggac atgaacaagc tggcgctggg cgtggtcaag
     3121 cccggtggcc tgttcgccac cttctcctgc accggcctgg tggccgagga ccagttcctc
     3181 gacatgctgc gccgcgcggc gtatttctcc ggccgcacga tccagatcct gaaggtggcc
     3241 ggcgccggtc cggaccatcc gttcatggcc cacgtgcagg aatcgcgtta cctgaaggcc
     3301 gtgttctgcc gcgtggtgga ttgattcgca ggatcccggc tacgttcggc atcgggtagt
     3361 gccggccgct ggccggctca tcctggtctc cgactctcgc tgagagccgg ccagcggccg
     3421 gcactaccgt ttgttgtcat ctcggcgcta tggtctgacg cttcccatcg aggtgaagcg
     3481 tcatgacgtt gcgcagtctg tctttgctgg tctcgctggc gctgtgcgcg ccgctgtccg
     3541 cccacgccgt tgagttcagc gcgcaggagc tggcccgtgc caaggtgctg caacagcgcc
     3601 tggtcaccct cgacagccat ctggatacgc cggccaactt cggtcgcagc ggcttcgaca
     3661 tcgagcagcg ccacgaccgc aacgcgcttt cgcaggtgga ctacccgcgc atggtcgaag
     3721 gggcgctgga cggcggcttc tgggcgatct acaccgacca gggcgaccgc agcgcagcgg
     3781 ctcacctggc cgagcgtgac catggcctgc agcggttgct ggaaatccgc gagatgctgg
     3841 cggccaatcc cgagcgcttc gcgctggcgc tgaccgccga tgatgccgcg cggatcaagg
     3901 ccgccggcaa gcgcgtggtc tacatcagca tggaaaacgc cagcccgctg gtggccgatc
     3961 ccagcctgct gtcgttctat caccgcgccg gcctgcgcct gctcagcacc gtgcactttg
     4021 ccaacaacga gttcgccgat tcggccaccg accccaaggg ggcggagtgg aaaggcctga
     4081 gcccggccgg caaggagctg gtgcggcagg cggtgaagct gggcatcgtg atcgaccagt
     4141 cgcatgcctc cgacgcggtg ttcgacgacc tgctggcgat gatgccggtg cccttcgtgc
     4201 tgtcgcacag ctcggccaag gcggtctacg accacccgcg caacctcgat gacgcacgcc
     4261 tgcgcaagct ggccaaggcg ggcggcgtga tccaggtgaa tgcctacggc ggatacctga
     4321 tcgacaccgc caagacaccg gagcgcaagc aggccgaaga agcgctgagc aagcagctgg
     4381 gtggctggga aggaatgggc atcgagcagg gtgtcgccct gctgaaggcc gagcaggaac
     4441 tggaccacga gcatccggtg cgccatgcca gcctggacga tttcttcgcc cacttcgagc
     4501 acatcctcaa ggtggtcggc cccgagcatg tggggatcgg cctggactgg gatggcggcg
     4561 gcggcctgag cgacctgccc gatgtcagcc agctgccgaa gatcaccgcc tggctgctgc
     4621 gcaagggcta caccgagcag cagattgccg gcatctgggg cggcaacctg ctgcgggtga
     4681 tgcgccaggc gcaggattac gcggcaaaac agggcgggtg aag
//
LOCUS       DAOKIP010000259         4675 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.260,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000259 DAOKIP010000000
VERSION     DAOKIP010000259.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 4675)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4675)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4675
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.260"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            83..1528
                     /locus_tag="QEL58_003648"
     CDS             83..1528
                     /locus_tag="QEL58_003648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014035593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ExeM/NucH family extracellular endonuclease"
                     /protein_id="HDS1678074.1"
                     /translation="MRRRSLALALTLLLPASAFAQALPQAAPAPATPAARSSATVVLT
                     AAPADWRALEGQRVRIAAPLTLAGTDGLERFGQLTVAFDGRLWQPTEVAAPGTAGYEQ
                     VMADNQRRRLLLDDGSDARDPAAVAYLPGNPVLRTGMQLRNVEGIVRVDAQGRPSLQV
                     EGVLKLPELKRPTVPTVPGSLHVAAFNLENFFNGDGQGGGFPTLRGARTLDEHKAQVA
                     KLVTTVNALGADVAALMELENDGYGPQSAIAELVDALNRDRGAQGDWRFVDAGNGPGD
                     NPIRVGIIYRGTRLQPVGKPATLTGGPFVEHSRVPLAQAFQGKHGAPFVVVANHFKSK
                     GCRDAAGADADHNDNQGCWNATRVTSAQQLHAWLQTDPTGTGARDAVLLGDFNAYAME
                     DPIRTLHDLGWQDAFKVARVEHPYSYVYNGYTGRLDHALLNPGMAKRLRGAAEWHSNA
                     DEQDASGYQGRNVQGPWRSSDHDPLLLGFDR"
     gene            complement(1640..2497)
                     /locus_tag="QEL58_003649"
     CDS             complement(1640..2497)
                     /locus_tag="QEL58_003649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004136071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA/RhaT family transporter"
                     /protein_id="HDS1678075.1"
                     /translation="MLYLSLAVICSVLVSVLLKVAGRHQLDVAQMVTWNYLVAATLTA
                     VALQPPLDALRAPHAPWLSLLALAVVLPSIFLVLGRAVAVAGIVRSDVAQRLSLLLSL
                     AAAFLFFGQTATPWKLAGLGLGLLAMVAISLRPRGPAVAASPGGWGWLLGVWAGFAVV
                     DVLLKQVALSGTPSMAAVLASFSVAFVLMLALQLWRHVSGRSRLAWRNLGAGALLGLL
                     NGGNILFYVHAHQAMPQSPATVFAGMNIGVVVLGALVGVFAFGEATTKWNRAGLALAV
                     LAIGLIAWG"
     gene            2541..3212
                     /locus_tag="QEL58_003650"
     CDS             2541..3212
                     /locus_tag="QEL58_003650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014035596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDS1678076.1"
                     /translation="MHKPSFPVAPGETACLELDGPAGPLEVVVDLPKADVPVQPIVAI
                     VCHPLSTEGGTLHNKVVTMTANTLRELGITTVRFNFRSVGASAGEFDHGVGEQDDLKA
                     VAAWVRCQRPDDRLWLAGFSFGAFVSLKATAELQPEALISIAPPAGRWDFGGIAPPAR
                     WLVIQGEQDEIVDPQAVYQWLASLDLPHELVRMPETSHFFHRKLIDLRGALTHGVKHW
                     LGAAA"
     gene            3209..4309
                     /locus_tag="QEL58_003651"
     CDS             3209..4309
                     /locus_tag="QEL58_003651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AFG1 family ATPase"
                     /protein_id="HDS1678077.1"
                     /translation="MSATELTPSQRYAEGVARGDWQNDPAQHAALAELDRIHLGLVDS
                     AEDGWLDRLSSFWKKPEPVKGLYFWGGVGRGKTFLVDLFYDGLPIKQKYRTHFHRFMR
                     SVHERLREHQGQSDPLAKIAQEWRSNLRVLVLDEFFVTDIGDAMLLARLLERLFAEGV
                     TLVTTSNTAVENLYLNGLQRESFLPAIGLLQRFCVELYAEGTEDYRMRALTRSPVYRA
                     PLAADSDDWLATRWNELSGGQPAKPGNIEIEGRKIPVRGRGKSIAWFDFAALCEGPRG
                     PSDYIEIAHEFNTVLLGGIPAFDRLNEDAARRFVNLIDELYDRHVNLVCTASTSPIEL
                     YTGQRLQGAFERTASRLIEMQSAEYLGTPHRA"
     gene            4376..4636
                     /locus_tag="QEL58_003652"
     CDS             4376..4636
                     /locus_tag="QEL58_003652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019184843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1678078.1"
                     /translation="MSQEIDKHVARALVDLAIFLEFSADDVVDPDAAIQRLEQLALTL
                     QMMDLESRSSLCSQFRSIAVDYSDEQAGFVESLGEALGLIEK"
BASE COUNT          803 a         1651 c         1542 g          679 t
ORIGIN      
        1 ccgaggtcga aaccccgcct gcaagcgggg tttcgcattt cagggttagt ctgtgcgccc
       61 tcttccctgg aatcgcccgt cgatgcgccg ccgctccctt gcccttgcac tgaccctgct
      121 gctgccggcc agcgccttcg cccaggccct gccgcaggct gcaccggccc cggcgacgcc
      181 tgccgcgcgc agcagcgcca ccgtggtgct gactgcggcc ccggccgact ggcgtgcgct
      241 ggagggacag cgcgtgcgca tcgccgcgcc gttgaccctg gccggcaccg acggcctgga
      301 gcgcttcggc cagctcaccg tggccttcga tggccgcctc tggcagccga ccgaagtggc
      361 cgcgccgggt accgccggct acgagcaggt gatggccgac aaccagcgtc gccgcctgct
      421 gttggacgat ggcagcgacg cccgtgaccc ggccgctgtg gcctacctgc ccggcaaccc
      481 ggtgctgcgt accggcatgc agctgcgcaa cgtcgaaggc atcgtgcggg tggatgcgca
      541 gggtcgaccc agcctgcagg tcgaaggcgt gctgaagctg ccggaactga agcgcccgac
      601 ggtgccgacg gtgccgggca gcctgcacgt ggccgccttc aacctggaga acttcttcaa
      661 cggtgacggc cagggcggcg gcttcccgac cctgcgcggt gcgcgcacgc tggacgagca
      721 caaagcgcag gtggccaagc tggtgaccac ggtcaatgca ctcggcgccg atgtcgcggc
      781 gctgatggag ctggagaacg acggttacgg tccgcagtcg gccatcgccg aactggtcga
      841 tgcgctcaac cgcgaccgcg gcgcgcaggg cgactggcgt ttcgtcgatg ccggcaacgg
      901 ccccggcgac aacccgatcc gggtcggcat catctaccgc ggcacgcgcc tgcagccggt
      961 cggaaagccg gccacgctga ccggcggccc gttcgtcgag cacagccgcg tgccgctggc
     1021 gcaggcgttc cagggcaagc acggcgcgcc gttcgtggtg gtcgccaacc acttcaagtc
     1081 gaagggctgc cgcgatgccg ccggcgccga cgccgaccac aacgacaacc aggggtgctg
     1141 gaatgccacc cgcgtgactt cggcgcagca gctgcacgcc tggctgcaga ccgacccgac
     1201 cggtaccggt gccagggacg cggtgctgct cggcgatttc aatgcctacg ccatggaaga
     1261 cccgatccgc accctgcatg acctgggctg gcaggacgcg ttcaaggtcg ccagggtcga
     1321 gcatccctac agctacgtct acaacggcta caccggccgc ctcgaccacg cgctgctgaa
     1381 cccgggcatg gccaagcgcc tgcgtggtgc cgccgaatgg cacagcaacg ccgacgagca
     1441 ggacgccagc ggctaccagg gccgcaacgt gcagggcccg tggcgcagct ccgaccacga
     1501 cccgctgctg ctgggcttcg acagataagg ttcgccgggg tacgcccggc ggctttctgt
     1561 agagtcgagc catgctcgac tgcttctcca aggacagtcg agcatggctc gactctaccg
     1621 aaggcaaggc cgcccgcgct cagccccagg caatcaaccc gatcgccagc accgccagcg
     1681 ccagcccggc gcggttccac ttcgtggtgg cctcgccgaa ggcgaacacg cccaccagcg
     1741 cacccagcac caccacgccg atgttcatgc cggcgaacac ggtggccggg ctctgcggca
     1801 tcgcctggtg cgcatgcacg tagaacagga tgttgccgcc gttgagcagg cccagcagcg
     1861 cgcccgcacc gaggttgcgc caggccagcc ggctgcggcc actgacatgc cgccacagct
     1921 gcagcgccag catcagcacg aaggccacgc tgaagctggc cagcactgcc gccatcgacg
     1981 gcgtacccga caacgcaacc tgcttgagca gcacgtccac cacagcgaac ccggcccaga
     2041 cccccagcag ccagccccaa ccgccgggcg aggcggccac tgccgggccg cgcgggcgca
     2101 ggctgatcgc caccatcgcc agcaggccca ggccgaggcc ggccagcttc cacggcgtcg
     2161 cggtctggcc gaagaacagg aacgcagcag ccaatgacag cagcaacgac agccgttgcg
     2221 ccacgtcgct gcggacgatg ccggccaccg ccaccgcgcg gcccagcacc aggaagatcg
     2281 acggcagcac caccgccagc gccagcagcg agagccacgg cgcatgcggc gcgcgcagtg
     2341 catccagcgg cggctgcagc gccacggcgg taagcgttgc cgccaccagg tagttccagg
     2401 tgaccatctg cgcgacatcc agctggtggc gtccggccac cttcaacaac accgaaacca
     2461 gcacactgca gatcacggcc aaggacaggt agagcatggg gcgggcacag ggcaggggcg
     2521 agggacggta tcatgttgcc atgcacaagc cctcgttccc cgtcgccccc ggcgaaaccg
     2581 cctgcctcga actggacggc ccggccggcc cgctggaagt ggtcgtcgac ctgcccaagg
     2641 ccgacgtgcc ggtgcagccg atcgtcgcca tcgtctgcca tccgctgtcc accgagggcg
     2701 gcacgctgca caacaaggtg gtcaccatga ccgccaacac cctgcgcgag ctgggcatta
     2761 ccacggtgcg cttcaacttc cgcagcgtcg gcgcgtcggc tggcgagttc gaccacggcg
     2821 tgggcgagca ggacgacctg aaggcggtcg ccgcctgggt gcgctgccag cgccctgatg
     2881 accgcctgtg gttggctggt ttcagcttcg gcgcgttcgt gtcgctgaag gcgaccgccg
     2941 agctgcagcc cgaagcgctg atctcgatcg cgccgccggc cggtcgctgg gacttcggtg
     3001 gcatcgcacc gccggcgcgc tggctggtga tccagggcga acaggacgag atcgtcgacc
     3061 cgcaggcggt ctaccagtgg ctggcgtcgc tggatctccc gcacgaactg gtgcgcatgc
     3121 ccgagaccag ccatttcttc caccgcaagc tgatcgacct gcgcggcgcg ctgacccacg
     3181 gcgtcaagca ctggttgggc gcggcggcat gagcgcaacc gagctgaccc cgtcgcagcg
     3241 gtacgccgaa ggggtcgccc gtggtgactg gcagaacgac ccggcccagc acgccgcgct
     3301 ggccgagctg gaccgcatcc acctgggcct ggtcgacagc gccgaagacg gctggctgga
     3361 ccgcctgtcc tcgttctgga aaaagcccga gccggtcaag ggcctgtact tctggggtgg
     3421 cgtcggacgc ggcaagacct tcctggtcga cctgttctac gacgggctgc cgatcaagca
     3481 gaagtaccgt acccacttcc accgtttcat gcgcagcgtg cacgagcgct tgcgcgagca
     3541 ccaggggcag agcgatccgc tggcgaagat cgcccaggaa tggcgcagca acctgcgcgt
     3601 gctggtgctg gacgagttct tcgtcaccga catcggcgat gccatgctgc tggcgcggtt
     3661 gctggaacgc ctgttcgccg agggcgtgac cctggtcacc acctccaaca cggcggtgga
     3721 gaacctgtac ctcaacggcc tgcagcgcga gagcttcctg ccggccatcg gcctgctgca
     3781 gcgcttctgc gtggagctgt acgccgaggg caccgaggat taccggatgc gtgcgctgac
     3841 ccgctcgccg gtgtaccgcg caccgctggc cgccgacagc gatgactggc tggccacgcg
     3901 ctggaacgaa ctgagcggcg gccagccggc caagcccggc aacatcgaga tcgagggccg
     3961 caagattccg gtgcgcggcc gcggcaagag catcgcctgg ttcgatttcg ccgccctttg
     4021 cgaaggcccg cgcggaccgt cggactacat cgagatcgcg cacgagttca acaccgtgct
     4081 gctgggcggc attcctgcct tcgatcgcct gaacgaagat gccgcgcgcc gcttcgtcaa
     4141 cctgatcgac gaactgtacg accgccacgt caacctggtc tgcaccgcca gcacctcgcc
     4201 gatcgagctg tacaccggcc agcgcctgca gggcgcgttc gagcgcaccg cctcgcgcct
     4261 gatcgagatg cagagcgccg agtacctggg taccccgcac cgggcgtgaa ggggccgctg
     4321 gttgtagagc cgagcccatg ctcggctgct tcaaatattc cggtagaggt gattcatgag
     4381 ccaggaaatc gacaagcacg ttgcgcgagc cctcgttgac ctcgccatat ttctcgagtt
     4441 ttcggcggat gatgtagtgg atcccgatgc tgcaatccag cggctcgaac aactggcttt
     4501 gacactgcag atgatggact tggagtcccg atcatcgttg tgctcgcagt tcagaagcat
     4561 cgcagtggac tattcagatg agcaggcagg ctttgtggaa agcctgggcg aagcgctggg
     4621 gctgatcgag aagtaatcta ctcgtctcta caggctcagg attgttcggg tatcc
//
LOCUS       DAOKIP010000260         4647 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.261,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000260 DAOKIP010000000
VERSION     DAOKIP010000260.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 4647)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4647)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4647
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.261"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            72..1403
                     /gene="phoR"
                     /locus_tag="QEL58_003653"
     CDS             72..1403
                     /gene="phoR"
                     /locus_tag="QEL58_003653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005412369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate regulon sensor histidine kinase PhoR"
                     /protein_id="HDS1678079.1"
                     /translation="MPRHIRSAWLKTLATVAAVLLFAGLVGWFSGHLWLCIALGALAT
                     LAWHYWRLRSVLRRLTARQRWDTADEGTGVWNELDRLLYRNQVEMRVRKRRLLDMLRS
                     YRAAAAALPDAVVVLDRNSQRVQWFNEAATALLGLHHPGDLGEALVERLQPMPLAHWL
                     AGGRNAEPILDVPSPVDPAIRLNLRLIPYSSDYWLLIARDVSKLLRLEQVRRDFVANV
                     SHELRTPLTVVHGYLDMMDPDDFPGTGPMLEEMRKQSQRMAQLVEDLLTLSRLESQEH
                     SEDETVAMQPMLATLRREAEAHSQGRHQISIDDLAGVDLQGSTKELHSAFSNLVTNAV
                     RYTPAGGRIAVEFRREGDGAVLAVRDSGYGIPATHLPRLTERFYRVSSSRSRESGGTG
                     LGLSIVKHILGLHHARLEIESEVGKGSVFSCHFDADHVRPRESAPLTSIEE"
     gene            1408..3495
                     /gene="ppk1"
                     /locus_tag="QEL58_003654"
     CDS             1408..3495
                     /gene="ppk1"
                     /locus_tag="QEL58_003654"
                     /EC_number="2.7.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyphosphate kinase 1"
                     /protein_id="HDS1678080.1"
                     /translation="MSSLGSLPLPVSPDNDPLRDPALYINRELSQLDFNFRVLAQAMD
                     PQVPLLERLRFMCISCTNLDEFFEIRAAAVRHAQEFGLPPAPDGMSPQTILTAIHDRA
                     AELVDQQYRCWNETLRPALAEAGIGVLGRQSWNHRQKRWLRAYFRNEIMPVLSPLGLD
                     PVHPFPKILNKSLNIVVVLKGTDAFGRAGHLAIVRAPRSLPRIIQLPEKLGGPQNFVF
                     LSSVLSTFVDELFPGMEVLGAYQFRVTRNSELVVDEEEVENLALALRDELVDRGYRPA
                     VRLEIAHDMPRDIVRTLLQNFGLTENAVYRIDGPVNLNRIIQLYDLIAQPDLKYPPMT
                     PRTLRDSDGIFETVARHDLLLHHPFDAFTAVLDLIRQAAVDPNVLAIKQTLYRTGKDS
                     LIVDALIQAARNGKDVTVVVELRARFDEEANLGLADRLQEAGVQVVYGVVGYKTHAKM
                     LLIVRREGRKLRRYVHLGTGNYHSGTARAYTDISLITADADIGNDVHLLFQQLSGLAS
                     KMKLKRLLQSPFTLHTGILGRIERETRIAATGRPARIIAKMNALNEPQVVRALYAASQ
                     AGVQIDLIIRGACTLRPGVPGISDNIRVRSIVGRFLEHSRVYWFGNDGAPEMYCASAD
                     WLERNLLRRVETCFPILDPELVKRVYREVLQNYLDDNLNAWELDAEGIYHKRAPAHDE
                     APHSAQMALMQGL"
     gene            3759..>4647
                     /locus_tag="QEL58_003655"
     CDS             3759..>4647
                     /locus_tag="QEL58_003655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005408371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDS1678081.1"
                     /translation="MSRENLNDLQAFVHVARAGSFTKAAAQLGVSQSALSHAMRGLEQ
                     RLGVRLLTRTTRSVSTTEAGARLLETLAPRLAEIEDGLAALAEYRERPAGTIRINATG
                     HAAEYIAWPRLAPLLQQYPELKVELAADYGLADIVAERYDIGIRLGERLARDMVAVPI
                     SPPLRMRVVGAPAYFRQHVVPRHPHDLAGHNCVTLRLPTHGGLMPWDFGQDGNELSVR
                     VSGQWIFNSMGMTRAAALAGSGLAWLPEDQVQPMLDDGRLQSVLDDWCPHFDGYYAYY
                     PSRRHVTVAMRTVLDALRGP"
BASE COUNT          770 a         1660 c         1469 g          748 t
ORIGIN      
        1 cggtgccggc aactctgcta taaccctcgg ttcaccccag tgaaccgccg cacctcaacg
       61 acgagatcgc aatgccccgc cacatccgct ctgcctggtt gaagaccctg gccaccgtcg
      121 ccgcggtact gctgttcgcc ggactggtgg ggtggttctc gggccatctg tggctgtgca
      181 tcgcactggg cgcgctggct accctggcct ggcattactg gcgcctgcgc agcgtgctgc
      241 gccgcctgac cgcgcgccag cgctgggaca ccgccgacga aggcaccggc gtctggaacg
      301 aactggaccg cctgctgtac cggaaccagg tggaaatgcg cgtgcgcaag cgccgcctgc
      361 tggacatgct gcgcagctac cgcgcggcag ccgccgcact gcccgatgcg gtggtggtgc
      421 tggaccgcaa cagccagcgc gtgcagtggt tcaacgaagc ggccaccgcc ctgctcggcc
      481 tgcaccatcc gggtgacctc ggcgaggcgc tggtcgaacg cctgcagccg atgccgctgg
      541 cccactggct ggccggtggc cgcaatgccg aaccgatcct ggacgtgccc tcgccggttg
      601 atccggcgat ccgcctcaac ctgcgcctga ttccctattc gtcggactac tggctgctga
      661 tcgcccgcga cgtcagcaag ctgctgcgcc tggaacaggt ccgccgtgac ttcgtggcca
      721 acgtttcgca cgaactgcgc acgccgctca ccgtggtcca cggctacctg gacatgatgg
      781 acccggacga tttccccggc accgggccga tgctggagga aatgcgcaag cagagccagc
      841 gcatggccca gctggtggaa gacctgctga ccctgtcgcg gctggaatcg caggagcaca
      901 gcgaggacga gaccgtggcc atgcagccga tgctggccac cctgcgccgc gaagccgaag
      961 cacacagcca gggccgccac cagatcagca tcgacgacct ggctggcgtg gacctgcagg
     1021 gctcgaccaa ggaactgcac agcgcgtttt ccaacctggt caccaatgcg gtgcgctata
     1081 ccccggccgg cggccgcatc gccgtcgagt tccgccgcga aggcgatggc gcggtgttgg
     1141 ccgtgcgtga ttccggctac ggcatcccgg ccacgcatct gccgcgcctg accgaacgtt
     1201 tctaccgcgt ctccagcagc cgttcccgcg aaagcggcgg caccggcctg ggcctgtcca
     1261 tcgtcaagca catcctcggc ctgcaccacg cgcggctgga gattgaaagc gaggtcggca
     1321 agggctcggt gttctcctgc catttcgatg ccgaccacgt gcgcccgcgc gagtccgccc
     1381 ccctgacttc catcgaagaa tgacgccatg agcagcctcg gatccctccc cctccccgtg
     1441 agcccggaca atgatccgct gcgtgatccg gcgctctaca tcaaccgcga actgtcgcag
     1501 ctggatttca acttccgcgt gctggcgcag gccatggacc cgcaggtacc gctgctggag
     1561 cgcctgcgct tcatgtgcat ctcctgcacc aaccttgatg aattcttcga gatccgcgcc
     1621 gccgccgtgc gccacgcgca ggagttcggc ctgccaccgg cgccggacgg catgagcccg
     1681 cagaccatcc tcaccgccat ccatgaccgc gccgccgagc tggtggacca gcagtaccgc
     1741 tgctggaacg agaccctgcg cccggcgctg gcggaggccg gcatcggcgt gctcggccgc
     1801 cagtcctgga accaccgcca gaagcgctgg ctgcgcgcgt acttccgcaa cgagatcatg
     1861 ccggtgctgt cgccgctggg cctggacccg gtgcatccgt tcccgaagat cctcaacaaa
     1921 tcgctgaaca tcgtggtggt gctgaagggc accgatgcgt tcggccgcgc cggccacctg
     1981 gccatcgtgc gcgcgccacg ctcgctgccg cgcatcatcc agctgcccga aaagcttggc
     2041 ggcccgcaga acttcgtgtt cctgtcttcg gtgctgtcga ccttcgtcga tgaactgttc
     2101 ccgggcatgg aagtcctggg cgcctaccag ttccgcgtca cccgcaattc cgagctggtg
     2161 gtggacgagg aagaagtgga gaacctggcg ctggcactgc gtgacgagct ggtcgatcgc
     2221 ggctaccggc cggcggtgcg cctggagatc gcccatgaca tgccgcgcga catcgtgcgc
     2281 accctgctgc agaatttcgg cctgaccgag aacgcggtgt accgcatcga cggcccggtc
     2341 aatctcaacc gcatcatcca gctgtacgac ctgatcgcac agccggacct gaagtacccg
     2401 ccgatgaccc cgcgcacgct gcgcgacagc gatggcatct tcgagaccgt tgcgcgacat
     2461 gacctgctgc tgcatcaccc cttcgatgcc ttcaccgcag tgctggacct gatccggcag
     2521 gcggcggttg atccgaacgt gctggcgatc aagcagaccc tgtaccgcac cggcaaggat
     2581 tcgctgatcg tcgacgcatt gatccaggcc gcgcgcaacg gcaaggatgt gaccgtggtg
     2641 gtcgagctgc gtgcgcgctt cgacgaagag gccaacctgg gcctggccga tcgcctgcag
     2701 gaagccggcg tgcaggtggt gtacggcgtg gtcggctaca agacccacgc caagatgctg
     2761 ctgatcgttc gccgcgaggg ccgcaagctg cgccgctatg tgcacctggg caccggcaac
     2821 taccacagcg gcaccgcccg tgcttacacc gacatcagcc tgatcaccgc cgatgcggac
     2881 atcggcaacg atgtgcacct gctgttccag cagctgtccg gcctggcgtc gaagatgaag
     2941 ctcaaacgcc tgctgcagtc gcccttcacc ctgcacaccg gcatcctcgg ccgcatcgag
     3001 cgcgaaaccc gcatcgccgc cacgggccgt ccggcgcgga tcatcgccaa gatgaacgca
     3061 ctgaacgaac cgcaggtggt gcgcgcgctg tatgccgcct cgcaggccgg cgtgcagatc
     3121 gacctgatca tccgtggcgc ctgcaccctg cgcccgggcg tgccgggtat ctcggacaac
     3181 atccgggtgc gctcgatcgt cggtcgattc ctcgagcaca gccgcgtcta ctggttcggc
     3241 aacgatggtg cgccggaaat gtactgcgcc agcgccgact ggcttgagcg caacctgctg
     3301 cgccgggtcg agacctgctt cccgatcctc gatccggaac tggtcaagcg ggtgtaccgc
     3361 gaggtcctgc agaactacct ggatgacaac ctcaatgcct gggaactgga cgccgagggc
     3421 atctaccaca aacgtgcccc ggcccacgac gaagccccgc attctgcgca gatggcattg
     3481 atgcaggggc tgtaacccgg tgtgtcgacc caggtcgaca cccaccaaca gccgcgcgga
     3541 acgccgtccc ggcagatcgc agaaatctgt cgaaggcggg gtgggtccgg ttgcgggggc
     3601 gtgagcgcca tggatggcgc gaccgaggct acatggacgt acttgcgccg tcccccgcaa
     3661 cctgagccac cccgcctccc gcaggaagcc cgattttgaa gttgacgttg ccgttgtttc
     3721 ggcaggtgcc gggcgcagcc cggccgtatc atcccctcat gtcccgtgaa aacctcaacg
     3781 atctgcaggc cttcgtccac gtcgcccgcg cgggcagctt caccaaggcc gccgcccagc
     3841 tcggcgtctc ccagtccgcg ctcagccatg ccatgcgcgg cctggaacag cggcttggcg
     3901 tgcgcctgct gacccgcacc acccgcagcg tgtccaccac tgaggccggc gcccgcctgc
     3961 tggaaaccct ggccccacgc ctggccgaga tcgaggacgg gctggccgca ctggccgagt
     4021 accgcgaacg cccggccggc accatccgca tcaacgccac cggccatgcc gccgaataca
     4081 tcgcctggcc gcggctggca ccgttgctgc agcagtatcc ggagctgaag gtggaattgg
     4141 ccgccgacta cgggctggcc gacatcgttg ccgagcgcta cgacatcggc atccgcctgg
     4201 gtgagcgcct ggcccgcgac atggtcgcgg tgccgatcag cccgccactg cgcatgcgcg
     4261 tggtcggtgc gcccgcctac ttccgccagc acgtggtacc gcggcatccg cacgacctgg
     4321 ccgggcacaa ctgcgtgacc ctgcgcctgc ccacccatgg cggcctgatg ccgtgggact
     4381 tcggccagga cggcaacgaa ctgagcgtgc gcgtgagtgg tcagtggatc ttcaacagca
     4441 tgggcatgac ccgcgccgcc gcgctggccg gcagcggcct ggcctggctg ccggaagacc
     4501 aggtgcagcc gatgctggac gatggtcgcc tgcaatccgt gctggacgac tggtgcccgc
     4561 atttcgatgg ctactacgcg tattacccgt cgcgccgcca cgtcaccgtg gcgatgcgca
     4621 cggtgcttga tgcattgcgc gggccga
//
LOCUS       DAOKIP010000261         4636 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.263,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000261 DAOKIP010000000
VERSION     DAOKIP010000261.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 4636)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4636)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4636
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.263"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(139..774)
                     /locus_tag="QEL58_003656"
     CDS             complement(139..774)
                     /locus_tag="QEL58_003656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008268370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HDS1678082.1"
                     /translation="MSVPGKILASVLLASGAATAWAAPALPAPQEFYFDSDPAAAPMV
                     AVQGEGDELVAQLLKLRERGRRAVEATVQLAMVAGAQGRGELAEQLYGEAMKEAPAQS
                     SSGRSVRWNYGWDLLRQGKPEAALEQWLASAGNARTKPSWVPPTYALALWRLGQKQEA
                     VQWYAAAVRTEPSQWSSTAQFAQLLPHWREDERASLAEVQQAWVAAPPAWP"
     gene            944..4630
                     /locus_tag="QEL58_003657"
     CDS             944..4630
                     /locus_tag="QEL58_003657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010487240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="indolepyruvate ferredoxin oxidoreductase family
                     protein"
                     /protein_id="HDS1678083.1"
                     /translation="MTSTAQLTSPSSADLIDRDYTLDHKYTRNEGRIYLSGVQALVRL
                     PLMQRLRDAAEGIDSAGFVSGYRGSPLGGFDLELWRARKHLEAARVKFTPGLNEDLGA
                     TMVWGTQQTNLFPGANVQGVFGMWYGKGPGVDRCGDVFKHANAAGTSRYGGVLALAAD
                     DHACRSSTLPHGSEDEFVSAMMPVLNPAGVQDILDMGLLGWAMSRYTGRWVGFKTIAE
                     TVESSASVEVDPLARRIVLPEDFDMPGGGLNIRWPDPPLDQEMRLHRYAVKAAQAFAR
                     ANGIDKVVMDAPRARLGIVTTGKSYLDVLQALEYLGLDEAACADIGIRVYKVGMTWPL
                     EPEGIARFAQGLEDIIVVEEKRAFIERQMKEQFFNWPASWGQRPSIVGKYDESGEWIL
                     PSTGELTPATIAGVIGRRIQKFFNNDSIEQRLHWMQEKEAELALPRASFPRVPHYCSG
                     CPHNTSTQVPEGSRALAGIGCHYMVTWMDRSTDTFTHMGGEGVTWAGQAPFTDTPHVF
                     QNLGDGTYFHSGSLAIRQAVAAGVNITYKILYNDAVAMTGGQPVDGPLSVPDIARQMR
                     AEGIHTIVVLSDNIGKWTGQREHFPSDVEFHDRSELDAVQKRLREVKGVSILIYEQTC
                     ATEKRRRRKRGKLEDPQKRVMINSLVCEGCGDCGKKSFCVSVLPKETEFGRKREIDQS
                     NCNKDYSCVNGFCPSFVTVHGGQPRKGSKRDASTLLDNLPAPVVRGTLEQPWNILITG
                     VGGTGVVTIGALLGMAGHLEGKGATVLDQTGLAQKGGAVTTHIRIARRPDDIHAVRIA
                     AGEADLVLGCDMVVVNDYWALSKVRAGRSQVVLNTYEAMPGTFTTRPDMQFPAADIVA
                     GVRVALGGQEPLLLDATQLATALLGDAIAANLFILGYAWQQGLVPLSFDSLMRAIELN
                     GAAVAMNQQAFAWGRLAVVDPQAVQQAAGLVRNRHTDTESTPGPLHPLPPGEWEGNEW
                     GATAAPRNTGDERELRGLPSHGGDVAFLPLDDARLSRSLDEMIERRAAFLVEYQDAAY
                     ANRYRDLVSRVRAAEAERIGGSTALTETVARYLFKLMAYKDEYEVARLYTSGDFQRRL
                     QQQFEGDYQLRFHLAPPLFARKDEQGRLLKKEYGPWMFKAFGLLAKLKFLRGGRFDVF
                     GRTEERRMERKLIGDYEATVQVLLDGLEDGRLALAVEIASIPEHIRGYGHVKEAHFAQ
                     AKAREAALLAQWRNPKALHIVQVA"
BASE COUNT          773 a         1621 c         1531 g          711 t
ORIGIN      
        1 tgggttcacg gcgtccccgc aaacccacag tgccccgcca tcccaccgga agaccgctgt
       61 tgctgttgct gttgctgttg ctgttgctct ggccgttgcc tctgcgggtg ccgggtgcaa
      121 cccggccgaa ccccttcctc agggccaggc tggcggcgcg gccacccatg cctgctgcac
      181 ctcggccagc gaggcgcgct catcctcgcg ccagtgcggc aacaactgcg caaactgggc
      241 cgtgctgctc cactgcgacg gctcggtccg caccgcagcc gcataccact gcaccgcctc
      301 ctgcttctgc cccaaccgcc acagcgccag cgcataggtc ggcggcaccc agctgggctt
      361 cgtgcgcgca ttgcccgccg aggccagcca ctgttccagc gccgcctccg gcttgccctg
      421 gcgaagcagg tcccagccgt agttccaacg cacgctgcgg ccactgctgc tctgggccgg
      481 cgcctctttc atggcctcgc catacaactg ctcggccagc tcgccacggc cctgtgcacc
      541 ggccaccatc gccagctgca ccgtggcttc aacggcacgc ctgccgcgtt cacgcagctt
      601 cagcagctgg gcgaccagtt catcgccctc gccctgcacc gccaccatcg gcgcagcggc
      661 cggatcgctg tcgaagtaga actcctgggg ggccggcaac gccggcgccg cccacgctgt
      721 ggccgctccc gaggccagca gaacgctggc caggatcttt cctggaactg acatcccttc
      781 tccccaggct gcaaccgcag cctccctctc tctgcccgat cctaacccca gcagcggcac
      841 gggcgcgagt gccgggggcg ttacgggggc gctgctacaa ttcgcgcctt tcccgccgcg
      901 tgcccgcacg cggccggtgc cagccgatcc taccgggcca gccatgacca gtaccgcgca
      961 actcacttcg ccctcttccg ccgaccttat cgaccgtgac tacacgctcg accacaagta
     1021 cacccgcaac gaggggcgga tctacctgag tggcgtgcag gcactggtgc ggttgccgct
     1081 gatgcagcgc ctgcgcgatg ccgccgaagg catcgacagc gccggcttcg tcagcggcta
     1141 ccgtggcagc ccgctggggg gcttcgacct ggaactgtgg cgcgcgcgca agcatctgga
     1201 agcggccagg gtgaagttca cccccggcct caacgaggat ctgggcgcca ccatggtctg
     1261 gggcacccag cagaccaacc tgttccccgg cgccaacgtg cagggcgtgt tcggcatgtg
     1321 gtacggcaag ggccccggcg tggaccgctg cggcgacgtg ttcaagcacg ccaacgccgc
     1381 cggcacctcg cgttacggcg gcgtgctggc gctggctgca gatgaccatg cctgccgcag
     1441 ttcgaccctg ccgcatggca gcgaggacga gttcgtcagc gcgatgatgc cggtgctgaa
     1501 cccggccggc gtgcaggaca tcctcgacat gggcctgctc ggttgggcga tgagccgcta
     1561 taccggccgc tgggtcggct tcaagaccat tgccgaaacg gtggaatcgt cggcctcggt
     1621 cgaggtcgat ccgctggcgc gacgcatcgt gctgcccgaa gacttcgaca tgcccggcgg
     1681 tggcctcaac atccgctggc cggacccgcc gctggaccag gaaatgcgcc tgcatcgcta
     1741 tgcggtgaag gcggcgcagg cctttgcccg cgccaacggc atcgacaagg tggtgatgga
     1801 tgcaccgcgc gcgcggctgg gcatcgtcac caccggcaag agctacctgg acgtgctgca
     1861 ggcgctggaa tacctgggcc tggacgaagc agcatgcgcc gacatcggta tccgcgtgta
     1921 caaggtcggc atgacctggc cgctggaacc ggagggcatc gcccgcttcg cgcagggcct
     1981 ggaagacatc atcgtggtgg aggagaagcg ggccttcatc gagcgccaga tgaaggaaca
     2041 gttcttcaac tggccggcca gctggggcca gcgcccgtcc atcgtcggca agtacgacga
     2101 gagcggtgaa tggatcctgc cgtccaccgg cgaactgacc ccggccacca tcgccggcgt
     2161 gatcggccgc cgcatccaga agttcttcaa caacgactcg atcgaacagc gcctgcactg
     2221 gatgcaggaa aaggaagccg agcttgcgct gccgcgcgcc agcttcccgc gcgtgccgca
     2281 ttactgctcg ggctgcccgc acaacacctc cacccaggtg ccggagggtt cgcgtgcgct
     2341 ggccggcatc ggttgccatt acatggtgac ctggatggac cgcagcaccg acaccttcac
     2401 ccacatgggc ggtgaaggcg tgacctgggc cgggcaggcg ccgttcaccg atacgccgca
     2461 cgtgttccag aacctgggcg acggcaccta tttccacagc ggttcgctgg cgatccgcca
     2521 ggcggtcgcg gccggcgtca acatcaccta caagatcctc tacaacgatg cggtggcgat
     2581 gaccggcggc cagccggtgg acggcccgct gagcgtgccg gacatcgcaa ggcagatgcg
     2641 cgccgaaggc atccacacca tcgtggtgct gtcggacaac atcggcaagt ggaccggcca
     2701 gcgcgagcac ttccccagcg atgtcgagtt ccatgaccgc agcgaactgg atgccgtgca
     2761 gaagcgcctg cgcgaagtga agggtgtttc catcctgatc tatgagcaga cctgcgccac
     2821 cgagaagcgc cgccgccgca agcgcggcaa gctggaagac ccgcagaagc gggtgatgat
     2881 caattcgctg gtctgcgaag gctgcggtga ctgcggcaag aagagtttct gcgtgtcggt
     2941 gctgccgaag gaaaccgaat tcgggcgcaa gcgcgagatc gaccagtcca actgcaacaa
     3001 ggactattcg tgcgtgaacg gcttctgccc gagcttcgtc accgtgcacg gtggccagcc
     3061 gcgcaagggc agcaagcgcg atgcctccac cctgctggac aacctgccgg caccggtggt
     3121 gcgcggtacg ctggaacagc cctggaacat cctgatcacc ggcgtcggcg gtaccggcgt
     3181 agtgaccatc ggcgcgctgc tgggcatggc cggccacctg gaaggcaagg gcgcgaccgt
     3241 gctcgaccag accggcctgg cgcagaaggg tggcgcggtg accacgcaca tccgcatcgc
     3301 gcgccgcccg gacgacatcc acgccgtgcg catcgccgcc ggtgaggccg acctggtgct
     3361 gggctgcgac atggtggtgg tgaacgatta ctgggcgctg tcgaaggtgc gcgccggccg
     3421 ttcgcaggtg gtgctgaaca cctacgaggc gatgccgggc accttcacca cccgcccgga
     3481 catgcagttc cccgccgccg acatcgtcgc cggtgtgcgc gtggcgctgg gtggccagga
     3541 gccgctgctg ctcgatgcca cccagctggc caccgcgctg ctgggcgatg ccatcgccgc
     3601 caacctgttc atcctcggct atgcctggca gcagggcctg gtgccgctgt cgttcgactc
     3661 gctgatgcgt gccatcgaac tcaacggcgc cgccgtggca atgaaccagc aggccttcgc
     3721 ctggggccgc ctggccgtgg tcgacccgca ggccgtgcag caggcggctg gcctggtgcg
     3781 caaccgccac accgataccg aatcgacccc gggcccgctt catccgctgc cgccgggcga
     3841 atgggagggc aacgaatggg gtgccaccgc cgcaccgcgc aacaccggcg acgagcgcga
     3901 actgcggggc ctgccctcgc acggtggcga tgtggcgttc ctgccgctgg acgacgcgcg
     3961 cctgtcgcgc tcgctggatg aaatgatcga gcgccgcgcc gcgttcctgg tcgagtacca
     4021 ggacgcagcc tacgccaacc gctatcgcga tctggtgtcg cgcgtgcgcg ccgccgaagc
     4081 cgagcgcatc ggcggctcca ccgcgctgac cgagaccgtc gcccgttacc tgttcaagct
     4141 gatggcatac aaggacgaat acgaagtggc gcgcctgtac accagcggcg acttccagcg
     4201 ccgcctgcag cagcagttcg agggcgacta ccagctgcgc ttccacctgg cgccgccgct
     4261 gttcgccagg aaggacgagc agggccggct gctgaagaag gaatacggcc cgtggatgtt
     4321 caaggcgttc ggcctgctgg cgaagctgaa attcctgcgt ggcggccgct tcgatgtgtt
     4381 cgggcgcact gaagagcgcc gcatggagcg caagctgatc ggtgactacg aggcgaccgt
     4441 gcaggtgctg ctggacggcc tggaagacgg ccgcctggcc ctggcggtgg agatcgccag
     4501 cattcccgag cacatccgcg gctatggcca cgtcaaggaa gcgcacttcg cgcaggccaa
     4561 ggcgcgagag gctgccctgc tggcgcagtg gcgcaatccg aaggcgctgc acatcgtgca
     4621 ggtggcttga aggccg
//
LOCUS       DAOKIP010000262         4611 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.264,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000262 DAOKIP010000000
VERSION     DAOKIP010000262.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 4611)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4611)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4611
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.264"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            833..1978
                     /gene="mltB"
                     /locus_tag="QEL58_003658"
     CDS             833..1978
                     /gene="mltB"
                     /locus_tag="QEL58_003658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017118980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic murein transglycosylase B"
                     /protein_id="HDS1678084.1"
                     /translation="MIRRTLACMLTLGLVACATQPKSPPSSPQASSTPRQPASKAHGP
                     AEAAPEATAATAPPVDLTPVPFEVARARFIADTAKRYGLKPEQISSVLDQAQVRQPII
                     AAMSRPAERVKPWNEYRPMFISKARIDGGRAFLAQHRAELDRVQQRTGVPAEVIVAII
                     GVETSYGKNAGSHRVLDALYTLAFYYPRSGDPAKLEREVRRELFFRDELAKLFELGRE
                     EKLDITTLKGSYAGAMGMGQFMPSSYLDYAVDGNGDGRRDLFNSYDDVFSSIANYFVK
                     KGGWVRGGQVAVPATLAPGREEFNPTEWMPTWSLADLAQRGYQPSAPVQPGATATPIT
                     LEGSTGKQYWLGFQNYYAITRYNLSKMYAMAVFQLSQAIAGQELPPA"
     gene            1975..3243
                     /locus_tag="QEL58_003659"
     CDS             1975..3243
                     /locus_tag="QEL58_003659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012481290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septal ring lytic transglycosylase RlpA family
                     protein"
                     /protein_id="HDS1678085.1"
                     /translation="MNIRWLAPGLIVLALAACSSAPKKPAMAGHGGKSSGTLVQGRGS
                     RPAHCPDGSPYAAAKEDLSTRGNYTAGGLYKPGVRDSTPDYIPNVACIPEPEVTAEER
                     SAIGNKSPYVVLGKSYNVLDDTRNYVERGTASYYGAKFHGRLTSNREVYDMYQFTAAH
                     KTLPLPSFARVTNLDNGESVIVRVNDRGPFHDGRVVDLSYAAAVRLGITQRGTGNVEV
                     RALQPGESNLLAQKPSRRERRAAEAAAATAVASARPAPAARVAADSDIDRLVQRLPAD
                     GMPARGQPATTQGVASTAPDVAVSSLPPSALPVRSSAPAPVAVASAAPRAAAPAPVRS
                     APTTPSLSQQVVGAVMVQVASFSNRDNANRAMGQLNAAGIVGATISDIAAGGRTLFRL
                     RVPASDHASAAELVGRIAGLGLGSPQIVKD"
     gene            3344..4564
                     /locus_tag="QEL58_003660"
     CDS             3344..4564
                     /locus_tag="QEL58_003660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017115444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine carboxypeptidase"
                     /protein_id="HDS1678086.1"
                     /translation="MNFRSAATALAATLVVGLASAQTPLPTPATPAPAAAAAAPATVA
                     TPPAPAPSVSKAWVLMDYATGQVLAGENVHEQLAPASITKVMTSYVIAAEVKNGKVRA
                     DDQVMMSERAWREGGAGTDGSYSGFPVNQTARLEDMEKGMAIQSGNDAAIALAEHVAG
                     SEEAFASLMNSYAAKIGMKDSHFVNAHGLTAQGHHSTAYDLALLGRAMVRDYPETYAY
                     NKIKEFQVGNIKQPNRNLLLWRDGSVDGIKTGHTSEAGYCLMSSAQRGDQRLIAVVLG
                     GASEKQRADDSLALLNWGFRFFETHRLYEPGKAVAEHKVWKGTTDKVQLGVAQPMLVS
                     VPRGRYNDLKPSIDVPKTLEAPFTAGQQVGTVKVTLDGKVIAEAPLVAVAAVEQAGFF
                     KRLWDSFWMWWESE"
BASE COUNT          806 a         1600 c         1496 g          709 t
ORIGIN      
        1 cccgccccct gacagttttc gggcgcgtcc acccacgaaa agaaaaaaga agatcaaaag
       61 caaaagcggc ctggcggatc gcttcattgc cttgtgtaga gccaagccgt gctcggctca
      121 cgagcaagcg cagcgcgcga cccgcttttg atcttttttc ttctccgtgg gtggcaggcc
      181 accgacatct gtcagagggc ggtcgggttg ggtccgcggg ggtgtcagcc gcatggatgt
      241 ggctgccaag cccccaagga tgggttcacg gcgtcccccg cggacccgac ccgaccgacc
      301 cactcgctgc ttctgctttc tgcgacaaat ccaacccacc cacgaggggc tgcgccgttg
      361 gctggaaatt tcctgactct gcgcaacgcc cgttgtggaa gcgttctcac agcagcccgc
      421 agctgcattg ccactgaccg aagtccataa aaaatgtaat ccggttcaca cttttacgct
      481 gcgttgatcc tgatcaatgg acttgtcgta atcggcctgc acaatggcgg cccgttcggc
      541 acggcgcgcc gtcaatcgtt gcagcgcgag ggggcgtcgg gcgggaagca gtactgatcc
      601 aacgggtaca gggagcgcgg ggtactgcca ctggggagcg gcagccgcgc aaggtaccga
      661 ccggatccgg tcgccggttg cgtctgcggg gatgggggcg caaccggcaa cctctatctg
      721 aatggggtgg gtcgatcacg acgtcttcac atttcccgct gaacgcgggc aaatcgttgt
      781 gattcatggt gttaggggtt ttaattcatc catgacctgc taacctgcga cgatgattcg
      841 acgcactctg gcctgcatgc tcaccctcgg cctggtcgcc tgcgcgaccc agccgaagtc
      901 cccaccgtct tcgccccagg ccagcagtac gccgcgccag cccgccagca aggcccatgg
      961 cccggccgag gccgcgcccg aagccactgc ggccaccgcg ccgccggtcg atctcacccc
     1021 ggtgccgttc gaggtcgcgc gggcccgctt cattgccgat accgccaagc gctatggcct
     1081 gaagccggag cagatcagca gcgtgctcga ccaggcgcag gtgcgccagc cgatcattgc
     1141 tgccatgtcg cgcccggccg aacgggtcaa gccgtggaac gagtaccggc cgatgttcat
     1201 cagcaaggcg cgtatcgacg gcggccgcgc gttcctggcg cagcatcgcg ccgagcttga
     1261 tcgcgtgcag cagcgcaccg gcgtgccggc cgaagtgatc gtggcgatca tcggcgtgga
     1321 aaccagttac ggcaagaatg ccggcagcca tcgcgtgctg gatgcgctgt acacgctggc
     1381 gttctactac ccgcgcagcg gcgatccggc caagctggaa cgcgaagtgc gccgcgagct
     1441 gttcttccgc gatgagctgg ccaagctgtt cgagctgggc cgcgaagaga agctggacat
     1501 caccacgctc aagggcagct atgccggtgc gatgggcatg ggccagttca tgccgtccag
     1561 ctatctcgat tacgcggtgg atggcaatgg cgatggccgc cgtgacctgt tcaacagcta
     1621 tgacgacgtg ttctcgtcca tcgccaacta cttcgtgaag aagggcggct gggtgcgtgg
     1681 cggccaggtc gccgtgccgg ccacgctggc gccggggcgc gaggagttca acccgaccga
     1741 gtggatgccc acctggtcgc tggccgacct ggcgcagcgt ggctaccagc cgagcgcgcc
     1801 ggtgcagccc ggtgccaccg ctaccccgat cacgcttgaa ggcagcaccg gcaagcagta
     1861 ctggctgggc ttccagaact actacgcgat cacccgctac aacctctcga agatgtacgc
     1921 gatggccgtg ttccagttgt cccaggccat cgccggacag gagctgcccc cggcatgaac
     1981 atcagatggt tggccccagg cttgatcgtc ctcgcgctgg cggcctgcag cagcgcgccg
     2041 aagaagccgg ccatggccgg ccatggtggc aagtccagcg gcacgctggt gcagggccgc
     2101 ggatcgcgcc cggcgcattg ccccgacggt tccccgtacg cggcggccaa ggaagacctg
     2161 agcacccgcg gcaactacac cgccggtggc ctgtacaaac cgggcgtgcg cgacagcacg
     2221 ccggactaca ttcccaacgt ggcctgcatt cccgagccgg aagtgaccgc cgaggaacga
     2281 tcggcgatcg gcaacaagtc gccgtacgtg gtgctgggca agtcgtacaa cgtgcttgac
     2341 gacacccgca actacgtcga gcgcggcacc gcgtcgtact acggcgccaa gttccatggc
     2401 cgcctgacct ccaaccgcga ggtctacgac atgtaccagt tcaccgccgc gcacaagacg
     2461 ctgccactgc ccagcttcgc ccgcgtgacc aacctcgaca acggcgagtc ggtgatcgtg
     2521 cgcgtcaacg accgggggcc gttccatgat ggccgcgtgg ttgacctgag ctatgccgcc
     2581 gccgtgcgcc tgggcatcac ccagcgcggc accggcaatg tcgaagtgcg cgcactgcag
     2641 ccgggcgaga gcaacctgct ggcgcagaag ccgtcgcgtc gcgagcgccg cgccgccgaa
     2701 gcggctgctg ctaccgccgt ggccagtgca cgaccggcac cggccgcgcg ggtcgccgcc
     2761 gacagcgaca tcgatcgcct ggtccagcgt ctgccggccg acggcatgcc tgcacgtggc
     2821 cagccggcca ccacccaggg cgtagccagc accgcgccgg acgtggcggt cagcagcctg
     2881 ccaccgagtg cactgccggt gcgcagctcc gcaccggcac cggttgcggt ggccagcgcg
     2941 gcaccgcgtg cggctgcgcc ggccccggta cgttccgccc cgacgacacc cagcctgtcg
     3001 cagcaggtgg tcggcgcagt gatggtgcag gtcgccagct tctccaaccg cgacaacgcc
     3061 aaccgcgcga tgggccagct caatgccgca ggcatcgtcg gcgccaccat cagcgacatc
     3121 gcggccggtg gccgcaccct gttccgcctg cgcgtacccg ccagcgacca tgccagtgcc
     3181 gcggaacttg tcggccgcat cgccggtctg ggcctgggtt cgccgcagat cgtcaaggat
     3241 tgaaccgccc gggccggtgc tgccggcccg tgctcccccg gccttacaat ggccgttacg
     3301 ttccaccctc cattcccggc cgtcccctgg agcctgctgt ccaatgaatt tccgttccgc
     3361 cgccactgcc ctggccgcca ccctggtggt gggtctggct tccgcccaga cgccgctgcc
     3421 gactccggcc acgccggcgc ctgccgccgc cgctgctgcc ccggccactg tcgccactcc
     3481 gccggccccg gcgccgagcg tgtccaaggc ctgggtgctg atggactacg ccaccggcca
     3541 ggtgctggcc ggcgaaaacg tccacgagca gctggccccg gccagcatca ccaaggtgat
     3601 gacgtcctac gtgatcgccg ccgaggtcaa gaacggcaag gtccgtgcgg acgaccaggt
     3661 gatgatgagc gagcgcgcct ggcgcgaagg tggcgccggt accgatggca gttacagcgg
     3721 cttcccggtc aaccagaccg cacgcctgga agacatggaa aagggcatgg cgatccagtc
     3781 cggcaacgac gccgcgatcg ccctggccga acatgtggcc ggcagtgaag aagcctttgc
     3841 gtcgctgatg aacagctacg ccgccaagat cggcatgaag gactcgcact tcgtcaacgc
     3901 ccacggcctc accgcgcagg gccaccacag caccgcctac gacctggcgc tgctgggccg
     3961 cgcgatggtg cgcgactacc cggaaaccta cgcgtacaac aagatcaagg aattccaggt
     4021 cggcaacatc aagcagccga accgcaacct gctgctgtgg cgcgatggca gcgtcgacgg
     4081 catcaagacc ggccacacct ccgaggccgg ttactgcctg atgagctcgg cccagcgcgg
     4141 tgaccagcgc ctgatcgccg tggtgctggg tggcgcgtcg gaaaagcagc gcgccgatga
     4201 cagcctggcc ctgctgaact ggggcttccg cttcttcgag acccaccgcc tgtacgagcc
     4261 gggcaaggcc gtggccgagc acaaggtctg gaagggcacc accgacaagg tgcagctggg
     4321 cgtggcccag ccgatgctgg tcagcgtgcc gcgtggccgc tacaacgacc tgaagccgag
     4381 catcgatgtg cccaagaccc tggaggcacc gttcaccgcc ggccagcagg tcggtaccgt
     4441 gaaggtcacc ctggatggca aggtcatcgc cgaagcaccg ctggtggcgg tggccgccgt
     4501 cgagcaggcc ggcttcttca agcgcctgtg ggacagcttc tggatgtggt gggaatcgga
     4561 atgatccacg ccgcggcgtg gtgaacgaaa aggccggcga aagccggcct t
//
LOCUS       DAOKIP010000263         4552 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.266,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000263 DAOKIP010000000
VERSION     DAOKIP010000263.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 4552)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4552)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4552
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.266"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(72..1280)
                     /locus_tag="QEL58_003661"
     CDS             complement(72..1280)
                     /locus_tag="QEL58_003661"
                     /EC_number="2.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002812978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acyltransferase"
                     /protein_id="HDS1678087.1"
                     /translation="MTKQIQDAYIVAATRTPVGKAPKGMFRNTRPDDMLAHVLRSVVA
                     QAPGVDVNRIDDAIIGCAMPEAEQGMNVARIGVLLAGLPNTIAAQTVNRFCSSGLQAV
                     AQAADAIRLGNADLMLAGGTESMSMVPMMGNKIAMAPSVFDNDHVAIAYGMGITAEKV
                     AEEWKVSREDQDAFALASHQKAMAAIQNGDFKDEISPYEIVSHLPDLADGQRIITRNK
                     VADTDEGPRPDSSAEGLAKLRPVFRNGQFGGTVTAGNSSQMSDGAGAVLLASEQAIKD
                     YGLTPLARFVSFSVAGVRPEVMGIGPIAAIPKALKQAGLTQDQLDWIELNEAFAAQSL
                     AVIRDCGLDPSKVNPLGGAIALGHPLGATGAIRTATLLHGLRRRQQKYGMVTMCIGTG
                     MGAAGIFEAL"
     gene            complement(1350..3722)
                     /locus_tag="QEL58_003662"
     CDS             complement(1350..3722)
                     /locus_tag="QEL58_003662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017158309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA
                     hydratase family protein"
                     /protein_id="HDS1678088.1"
                     /translation="MSNSLLVRRAAVLGAGVMGAQIAAHLTNAGVDTVLFDLPAKEGP
                     ADGIVLKAIANLGKLSPAPLASKSLAEAITPANYESGLEQLKDCDLIIEAIAERMDWK
                     QDLYKKIAPFVADHAVLASNTSGLGINKLADVLPEQLRHRFCGVHFFNPPRYMHLAEL
                     IPATTTDAAVLEGLEEFLVTTLGKGVVYAKDTPNFIGNRIGVFSILSTIHHTQQFGLG
                     FDEVDGLTGPLVGRPKSATYRTSDVVGLDTMAHVIKTMGDTLPNDPWHAFFKSPKWLD
                     ALIAKGALGQKTGAGIFRKVGKDIVVLDLEKQDYRPADRAAAPEVVEILKIRNPAEKF
                     AKLRESQHPQAQFLWATFRDLFHYSAYHLADIAETARDVDLAIRWGYGWSLGPFETWQ
                     AAGWKQVAQWIADDIVAGKSMSNAPLPDWVFDGRDGVHAAEGSYSPSRNAKLPRSSLP
                     VYQRQRFPDPLLGETFAPGETVFENDGLRMWHDGDGIAVVSFKTKMNTVSDQVLDGLQ
                     ECVSRAEKDFQGLVIWQQKEPFSAGADLAGALGLLQAGKVDQFEEMVANFQRTSQRIK
                     YSLVPVVAAVRGLALGGGCEFQMHSAKTVAFLESYIGLVEAGVGLLPAGGGLKELAVR
                     ASQAAGPGGDVFAELKKTFETVAMAKVSNSAVNAKELGLLRSTDKVVFNSYEALHIAK
                     AEARALAEAGYRPPLPARRIQVAGDVGIATFKMMLVNMLEGRFISPYDYEIAERIATV
                     LCGGKVDRGTLVDEEWLLTLERKHFVELAQQEKTQARIAHMLKTGKPLRN"
     gene            complement(3776..4429)
                     /locus_tag="QEL58_003663"
     CDS             complement(3776..4429)
                     /locus_tag="QEL58_003663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR family transcriptional regulator"
                     /protein_id="HDS1678089.1"
                     /translation="MAKPAHFSTKDRILGAAEELFAQHGFAGTSLRQVTSQADVNIAA
                     VNYHFGSKENLVNEVFRRRMDEMTGARLAQLERARSEHPGQLRPVLAAFVEPALALAQ
                     DRQNGGAFVRVIARAYAEKNDNLRKFLSDHYGHVLRAFGKAIAECAPDLSKEELYWRL
                     DFLAGSLTYAMADFGLIKRPAGVTEAAHRAHAAHELIHFAEAGFRAAARASALPASP"
BASE COUNT          688 a         1462 c         1597 g          805 t
ORIGIN      
        1 cacggcgtgt cccgggcagc cctgccgacc cggcccacgc catgaagccc aacgaggcag
       61 cgccttgaac cttacagcgc ctcgaaaata cccgccgcgc ccatgccggt gccgatgcac
      121 atcgtcacca tgccgtactt ctgctggcga cgacgcaggc cgtgcagcag ggtcgcggta
      181 cggatcgcgc cggttgcacc cagcgggtgg cccagggcga tcgcgccgcc cagcgggttg
      241 accttgctcg ggtccaggcc gcagtcgcgg atcaccgcca gcgactgcgc ggcgaaggct
      301 tcgttgagct cgatccagtc cagctggtcc tgggtcaggc cggcctgctt cagtgccttc
      361 gggatcgcgg cgatcgggcc gatgcccatc acttccggac gcacgccggc caccgagaag
      421 ctgacgaaac gcgccagcgg ggtcaggccg taatccttga tcgcctgctc cgaagccagc
      481 agcacggcgc cggcgccatc gctcatctgc gaggagttgc cggcagtgac ggtgccgccg
      541 aactgaccgt tgcggaacac cgggcgcagc ttggccaggc cttcggccga ggaatccgga
      601 cgcgggcctt catcggtgtc ggccaccttg ttgcgggtga tgatgcgctg gccatcggcc
      661 aggtccggca ggtgcgagac gatctcgtac gggctgatct cgtccttgaa gtcaccgttc
      721 tggatcgcgg ccatggcctt ctggtgcgag gcgagggcga acgcatcctg gtcttcgcgc
      781 gagaccttcc attcctcggc caccttctcc gcggtgatgc ccatgccgta ggcgatggcg
      841 acgtggtcgt tgtcgaacac gctcggtgcc atcgcgatct tgttgcccat catcggcacc
      901 atcgacatcg attcggtgcc accggccagc atcaggtcgg cgttgcccag gcggatcgcg
      961 tcggcggcct gcgccacggc ctgcaggccg gaggagcaga agcggttcac ggtctgcgcg
     1021 gcgatggtgt tgggcaggcc ggccagcagc acgccgatgc gcgccacgtt catgccctgc
     1081 tcggcttccg gcatggcgca gccgatgatc gcgtcatcga tgcggttgac gtccacgccc
     1141 ggggcctgtg cgacgacgct gcgcagcacg tgcgcaagca tgtcgtcggg gcgggtgttg
     1201 cggaacatgc ccttgggcgc cttgccaacc ggggtgcggg tggcggcgac gatgtaggcg
     1261 tcctggattt gcttggtcat tgcagtgatc tcttgaatag gggttggaag aggttgccgg
     1321 ccagcggccg gcactaccga tgtcttccgt cagttccgca gcggcttgcc ggtcttcagc
     1381 atgtgcgcga tgcgggcctg ggtcttttcc tgctgggcca gttcgacgaa gtgcttgcgc
     1441 tccagggtca gcagccactc ttcgtcgacc agggtgccgc ggtcgacctt gccgccgcac
     1501 agcacggtgg cgatgcgctc ggcgatctcg tagtcgtacg ggctgatgaa acggccttcc
     1561 agcatgttga ccagcatcat cttgaaggtg gcgataccca cgtcaccggc cacctggatg
     1621 cggcgtgccg gcagcggcgg gcggtaaccg gcttcggcca gcgcacgggc ttcggccttg
     1681 gcgatgtgca gcgcttcgta gctgttgaac accaccttgt cggtgctgcg cagcaggccc
     1741 agttccttgg cgttgaccgc cgagttggac accttggcca tcgccacggt ctcgaaggtc
     1801 ttcttcagtt cggcgaacac gtcaccgcca gggccggcgg cctgcgaggc gcgcacggcc
     1861 agttccttca ggccaccgcc ggccggcagc aggcccacgc cggcctcgac caggccgatg
     1921 tagctttcca ggaaggccac ggtcttggcg ctgtgcatct ggaactcgca gccgccaccc
     1981 agggccaggc cgcgcacggc agccaccacc ggcaccagcg agtacttgat gcgctggctg
     2041 gtgcgctgga agttggcgac catctcttcg aactggtcga ccttgccggc ctgcagcagg
     2101 ccgagggcac cggccaggtc ggcaccggcg gagaagggct ccttctgctg ccagatcacc
     2161 aggccctgga agtccttctc ggcgcggctg acgcattcct gcaggccgtc cagcacctgg
     2221 tcggacacgg tgttcatctt ggtcttgaag ctgaccacgg cgatgccgtc gccgtcatgc
     2281 cacatgcgca ggccgtcgtt ctcgaacacg gtctcgcccg gcgcgaacgt ctcgcccagc
     2341 agcggatccg ggaaacgctg gcgctggtac accggcagcg acgaacgcgg cagcttggcg
     2401 ttgcgcgacg ggctgtagct gccctcggcg gcatgtacgc cgtcgcggcc atcgaacacc
     2461 cagtccggca gcggggcgtt gctcatgctc ttgccggcga cgatgtcatc ggcgatccac
     2521 tgcgcgacct gcttccagcc agcggcctgc caggtttcga acgggcccag cgaccagccg
     2581 tagccccagc ggatggcgag gtcgacgtcg cgcgcggtct cggcgatgtc ggccaggtgg
     2641 taggcgctgt agtggaacag gtcgcggaag gtcgcccaca ggaactgcgc ctgcgggtgc
     2701 tggctctcgc gcagcttggc gaacttctcg gccgggttcc tgatcttcag gatctcgacc
     2761 acttccggtg cagcggcgcg gtcggccggg cggtagtcct gcttctccag gtccagcacc
     2821 acgatgtcct tgccgacctt gcggaagatg ccggcgccgg tcttctggcc cagcgcgccc
     2881 ttggcgatca gtgcgtccag ccacttcggc gacttgaaga acgcgtgcca cgggtcgttg
     2941 ggcagggtgt cgcccatggt cttgatgacg tgggccatgg tgtccaggcc gaccacgtcg
     3001 gaggtgcggt aggtagccga cttcgggcgg ccgaccagcg ggccggtcag gccgtccact
     3061 tcatcgaagc ccaggccgaa ctgctgggtg tggtggatgg tggacaggat cgagaacacg
     3121 ccgatgcggt tgccgatgaa gttcggggtg tccttggcgt acaccacgcc cttgcccagg
     3181 gtggtaacca ggaattcttc caggccttcc agcacggcgg catcggtggt ggtggccggg
     3241 atcagctcgg ccaggtgcat gtagcgcggc gggttgaaga agtgcacgcc gcagaagcgg
     3301 tggcgcagct gctcgggcag cacgtcggcc agcttgttga tgcccaggcc cgaggtgttg
     3361 gaggccagca ccgcgtggtc ggccacgaac ggcgcgatct tcttgtacag gtcctgcttc
     3421 cagtccatgc gctcggcgat ggcctcgatg atcaggtcgc agtccttcag ctgctccagg
     3481 ccggactcgt agttggccgg ggtgatggcc tcggccagcg acttgctggc cagcggcgcc
     3541 gggctcagct tgcccaggtt ggcgatcgcc ttcagcacga tgccgtcggc cggaccttcc
     3601 ttggcgggca ggtcgaacag cacggtgtcg acgccagcgt tggtgaggtg ggcggcgatc
     3661 tgggcaccca tgacgccggc acccagcacg gcggcgcggc ggactagcag ggaattggac
     3721 atggtgtagg gcctttgttg gtcagcagtt actgggtggg tcacacccgg tggaatcacg
     3781 gggaagcggg cagggcgctg gcgcgtgcgg cggcgcggaa cccggcttcg gcgaaatgga
     3841 tcagttcgtg ggcggcatgg gcacgatgcg ccgcttcggt gacaccggcg ggacgcttga
     3901 tcagcccgaa gtcggccatg gcataggtga gcgagccggc caggaagtcc aggcgccagt
     3961 acagctcttc cttgctcagg tcgggcgcgc attcggcaat cgccttgccg aacgcacgca
     4021 gcacgtggcc gtagtggtcg gacaggaact tgcgcaggtt gtcgttcttc tcggcgtatg
     4081 cgcgcgcgat cacgcgcacg aaggcaccgc cgttctggcg gtcctgggcc agcgccagcg
     4141 ccggctcgac gaaggcggcc agcaccgggc gcagctgccc gggatgttcg ctgcgggcgc
     4201 gctcgagctg ggccaggcgg gcgccggtca tctcgtccat gcggcggcgg aacacctcgt
     4261 tgaccaggtt ttccttggag ccgaagtggt aattgaccgc cgcgatgttg acgtcggcct
     4321 ggctggtcac ctggcgcagc gaggtgccgg cgaaaccgtg ctgggcaaac agctcctcgg
     4381 cggcaccgag gatgcggtcc ttggtcgaga agtgggcggg tttggccatc ggcgggcaga
     4441 ccttaatcaa acgattgttt gatactagga ccagacggta gcgtatggca ttttgcagtg
     4501 cagcaaaaat gcccagggcg gtcagaatcc gctcaggtgg gtgaatgggc gc
//
LOCUS       DAOKIP010000264         4514 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.267,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000264 DAOKIP010000000
VERSION     DAOKIP010000264.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 4514)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4514)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4514
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.267"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            12..395
                     /gene="rbfA"
                     /locus_tag="QEL58_003664"
     CDS             12..395
                     /gene="rbfA"
                     /locus_tag="QEL58_003664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosome-binding factor RbfA"
                     /protein_id="HDS1678090.1"
                     /translation="MPKTFHRTDRVSAQLRRELGTLVHNAVREHGLPSVSVSDVEITR
                     DMAHAKVFVTALMPERSAEAVAGLKELGYRLRMDLARAMKLRHVPELHFHYDDSVDRG
                     EHIDNILRDLPDTLAAEKRRESDEE"
     gene            501..1409
                     /gene="truB"
                     /locus_tag="QEL58_003665"
     CDS             501..1409
                     /gene="truB"
                     /locus_tag="QEL58_003665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(55) synthase TruB"
                     /protein_id="HDS1678091.1"
                     /translation="MTRIQFRRLDGILLLDKSTGMSSNAALQVARRLFRAEKGGHTGS
                     LDPLATGLLPLCFGEATKIAGLLLGSAKAYDAEIVLGQTTDTDDSEGQVLLQRPVPAV
                     SAQALQAALAPLTGSILQRAPIYSALKQGGEPLYVKARRGDVIEAPEREVQVHAIEVL
                     EQQPERLRLRVTCGSGTYIRSLARDLGESLGCGAHISALRRLWVEPFREPAMVTLDQL
                     RAMVEAGDEAAMDALLLPLAAGLAEYPRVDLDADQAHRFCVGQRQRDLSWPRGLVAVF
                     GPDDAVQGLGQVDDSGLLAPQRRFNL"
     gene            1584..1844
                     /gene="rpsO"
                     /locus_tag="QEL58_003666"
     CDS             1584..1844
                     /gene="rpsO"
                     /locus_tag="QEL58_003666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002810194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S15"
                     /protein_id="HDS1678092.1"
                     /translation="MSIDTQKVIEDNKRSAADTGSPEVQVALLTARIELLTGHFKTHK
                     KDHHSRRGLLQMVNRRRSLLDYLKKKDVERYKALIEKLGLRR"
     gene            1996..4104
                     /gene="pnp"
                     /locus_tag="QEL58_003667"
     CDS             1996..4104
                     /gene="pnp"
                     /locus_tag="QEL58_003667"
                     /EC_number="2.7.7.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011259733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyribonucleotide nucleotidyltransferase"
                     /protein_id="HDS1678093.1"
                     /translation="MAKITKTFQYGKHTVTLETGEVARQASGAVIVKMDDTVLLVTAV
                     AAKSAREGQDFFPLTVDYQEKFYAGGRIPGGFFKREGRATEKETLISRLIDRPIRPLF
                     PEDYKNEVQIIATVMSLNPDVDGDIPALIGASAALALAGTPFMGPIGAAKVGYKNGEY
                     ILNPTVSELADSQLELVVAGTSNAVLMVESEAALLSEEVMLGAVTFGHREMQKVINAI
                     NELTVEAGTKPSTWEAPAKNDALISALKEAIGPRLGEAFQVRDKLQRRDAISAIKKDV
                     VETLAGRVAAEGWNPAELSKEFGELEYRTMRDSVLDTKVRIDGRALDTVRPIAVKTGV
                     LPRTHGSSLFTRGETQAIVTITLGTARDGQVIDAVAGEYKENFLFHYNFPPFSVGECG
                     RMMGPKRREIGHGRLAKRGVLAVMPSLEAFPYTIRVVSEITESNGSSSMASVCGSSLA
                     LMDAGVPVKAPVAGIAMGLVKEGERFVVLSDILGDEDHLGDMDFKVAGTAEGISALQM
                     DIKIEGITEEIMKQALQQAKAGRLHILGEMAHGLTAPRSELSDYAPRLLTIKIHPDKI
                     REVIGKGGSTIQAITKETGTQIDIQDDGTIVIASVNAIAAQAAKARIEQITSDVEPGR
                     IYEGKVAKIMDFGAFVTILPGKDGLVHVSQISSDRVEKVGDVLKEGDVVKVKVLEVDK
                     QGRIRLSMKAVEEGDAVSAE"
     gene            4239..>4514
                     /locus_tag="QEL58_003668"
     CDS             4239..>4514
                     /locus_tag="QEL58_003668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008267428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HDS1678094.1"
                     /translation="MDTLRLLDLDIDRPAQRVSRAGQVLPVSGLSWTLLDVMLAHGAE
                     VVDFDTLAAQVWAPAVVGEDAVSQRVKLLRQALGDDSRRPRYIRSVRG"
BASE COUNT          807 a         1548 c         1445 g          714 t
ORIGIN      
        1 aagagctcct cgtgcccaag actttccatc gaaccgaccg tgtctccgcc cagctgcgcc
       61 gtgaactcgg caccctggtg cacaacgccg tgcgcgagca cgggttgccc tcggtgagcg
      121 tgtccgacgt ggaaatcacc cgcgacatgg cccatgccaa ggtgttcgtc accgcgctga
      181 tgccggaacg ctcggctgaa gccgtggccg gcctgaagga gctgggctac cgcctgcgca
      241 tggacctggc ccgtgccatg aagctgcgcc acgtgccgga gctgcatttc cactacgacg
      301 actcggtcga ccgtggtgag cacatcgaca acatcctgcg cgacctgccc gatacgctgg
      361 ccgcggagaa gcgtcgcgag agcgacgaag aataaggcag cgccgggccc gtgcccggcg
      421 tctttccgtt ccggcaacgc gatgcccgtg cgggccgcgc tgcagcagcc gggcatggct
      481 cggctctaca acatcctgtc atgacccgaa ttcagttccg ccgcctggat ggcatcctgc
      541 tgctcgacaa gtcgaccggc atgagctcca acgccgccct gcaggtggcc cgtcgcctgt
      601 tccgcgccga aaagggcggt cacactggca gcctcgaccc gctggccacc ggcctgctgc
      661 cgctgtgctt cggcgaggcg accaagatcg ccggcctgct gctgggctcg gccaaggcct
      721 acgacgccga gatcgtgctt gggcagacca ccgataccga cgattccgaa ggccaggtgc
      781 tgctgcagcg cccggtgccg gcagtcagcg cgcaggccct gcaggccgcg ctggcgccgc
      841 tgaccggcag catcctgcag cgggcgccga tctattcggc gctgaagcag ggcggtgagc
      901 cgctgtatgt gaaggcccgc cgtggcgacg tcatcgaggc gcccgagcgc gaggtgcagg
      961 tgcacgccat cgaggtgctg gagcagcagc ctgaacggct gcgcctgcgc gtcacctgcg
     1021 gctcgggcac ctacatccgc agcctggccc gtgacctcgg tgaaagcctg ggctgcggcg
     1081 cgcatatcag cgcgctgcgc cggctctggg tcgaaccatt ccgcgagccg gcgatggtta
     1141 ccctggacca gctgcgggcg atggtcgagg cgggcgacga ggccgccatg gatgcgctgc
     1201 tgctgcccct ggccgccggc ctggccgagt acccgcgggt cgacctcgac gccgaccagg
     1261 ctcaccggtt ctgtgtgggc cagcgccagc gcgacctgtc ctggccgcgc ggcctggtcg
     1321 ccgtgttcgg cccggacgat gctgtccagg ggctgggcca ggtcgatgac agtggcctgc
     1381 tggcccccca gcgccgtttc aacctctgac cggggcccgc cggttcagcc ccggaccttg
     1441 tcccggaagc ccccggccgt tacaatttcg cggccgtttt ccggcagcct gcctcgcgca
     1501 ggtttcatcc tcgtagtcca cggcgagcct ggcggtgcgc gaagcgcgtt cctgccggcc
     1561 acgcatcaca gagaaaaaag aaaatgtcga tcgacaccca gaaggtcatt gaagacaaca
     1621 agcgcagcgc cgccgacacc ggctccccgg aagtccaggt ggccctgctg accgcccgca
     1681 tcgaactgct gaccggccac ttcaagaccc acaagaagga ccaccacagc cgccgcggcc
     1741 tgctgcagat ggtcaaccgc cgtcgcagcc tgctcgacta cctgaagaag aaggacgtcg
     1801 agcgttacaa ggccctgatc gaaaagcttg gcctgcgtcg ctaagcaacg aatcccccgc
     1861 ggcgcagcga tgcgccgcgg ttttgttttg tagcaccgca atccccgatt caggccggaa
     1921 cgatccggcc acccgcaggc ggcaagggtc gccgacggtc caaattcgca gacagcatcc
     1981 ccaaggacac cctccgtggc aaaaatcacc aaaaccttcc agtacggcaa gcacaccgtc
     2041 acgcttgaga ccggcgaagt cgcccgccag gccagcggtg ccgtcatcgt caagatggac
     2101 gacaccgtac tgctggtcac cgccgtcgcc gccaagagcg cgcgcgaagg ccaggacttc
     2161 ttcccgctga ccgtcgatta tcaggaaaag ttctacgccg gcggccgtat cccgggtggt
     2221 ttcttcaagc gcgaaggccg tgcgaccgag aaggaaaccc tgatctcgcg tctgatcgac
     2281 cgtccgatcc gcccgctgtt cccggaagac tacaagaacg aagtgcagat catcgccacg
     2341 gtcatgtcgc tgaacccgga cgtggacggt gacatcccgg ccctgatcgg tgcctcggct
     2401 gcgctggccc tggccggcac cccgttcatg ggtccgatcg gcgctgccaa ggtcggttac
     2461 aagaacggcg agtacatcct gaacccgacc gtcagcgaac tggctgactc gcagctggaa
     2521 ctggtcgtcg ccggtacctc caacgccgtg ctgatggtcg aatccgaagc tgcgctgctg
     2581 tccgaagaag tgatgctggg cgccgtgacc ttcggtcacc gcgagatgca gaaggtcatc
     2641 aacgccatca acgagctgac cgtcgaagcc ggcaccaagc cgtcgacctg ggaagccccg
     2701 gccaagaacg acgcgctgat ctccgccctg aaggaagcca tcggcccgcg cctgggcgaa
     2761 gccttccagg tgcgcgacaa gctgcagcgc cgcgacgcca tctcggcgat caagaaggac
     2821 gtggtcgaaa ccctggccgg ccgtgtggcc gccgagggct ggaacccggc cgagctgtcg
     2881 aaggaattcg gcgagctgga ataccgcacc atgcgtgact cggtgctgga caccaaggtc
     2941 cgcatcgacg gccgtgcgct ggacaccgtc cgcccgatcg ccgtgaagac cggcgtgctg
     3001 ccgcgtaccc acggttcctc gctgttcacc cgcggcgaaa cccaggccat cgtgaccatc
     3061 accctgggca ccgcccgtga cggccaggtc atcgacgccg ttgccggtga gtacaaggaa
     3121 aacttcctgt tccactacaa cttccctccg ttctcggtgg gtgagtgcgg ccgcatgatg
     3181 ggcccgaagc gccgcgaaat cggccacggt cgcctggcca agcgcggcgt gctggctgtc
     3241 atgccgtcgc tggaagcctt cccgtacacc atccgcgtcg tctcggaaat caccgagtcg
     3301 aacggttcct cgtcgatggc ctcggtctgc ggttcgtcgc tggccctgat ggacgccggc
     3361 gtgccggtga aggcgccggt tgccggtatc gccatgggcc tggtcaagga aggcgagcgc
     3421 ttcgtcgtcc tgtccgacat cctgggtgac gaagatcacc tgggcgacat ggacttcaag
     3481 gtggccggta ccgctgaggg catctccgcc ctgcagatgg acatcaagat cgaaggcatc
     3541 accgaagaga tcatgaagca ggccctgcag caggccaagg ctggccgtct gcacatcctg
     3601 ggtgaaatgg cccacggcct gaccgccccg cgttcggagc tgtccgacta cgcgccgcgc
     3661 ctgctgacca tcaagatcca cccggacaag atccgcgaag tgatcggcaa gggtggttcg
     3721 accatccagg ccatcaccaa ggaaaccggc acccagatcg acatccagga tgacggcacc
     3781 atcgtcatcg cttcggtcaa cgccatcgct gcccaggccg ccaaggcccg catcgagcag
     3841 atcacctcgg acgtcgagcc gggccgcatc tacgaaggca aggtcgccaa gatcatggac
     3901 ttcggtgcgt tcgtcaccat cctgccgggc aaggacggcc tggtccacgt ctcgcagatc
     3961 tccagcgacc gcgtcgagaa ggtcggcgac gtgctgaagg aaggcgatgt ggtcaaggtc
     4021 aaggtgctgg aagtcgacaa gcagggccgt atccgcctgt cgatgaaggc cgtggaagaa
     4081 ggcgacgccg tcagcgccga gtaatcgacc tccggtcgat tacggtgggt gtcaaccttg
     4141 gttgacacgc ttctgcaatc gctgaaatga aaaagcgggc ttcggcccgc tttttctttg
     4201 cccgcgatcc gcggccggcg tgccgctatg cttcgcccat ggacaccctt cgcctgctcg
     4261 atctggacat tgaccgcccg gcacagcggg tcagccgcgc cggccaggtc ctgccggtca
     4321 gcggcctgag ctggacgctg ctggacgtga tgctggcgca cggcgccgag gtcgtcgatt
     4381 tcgacaccct ggcggcgcag gtctgggcgc cggccgtggt cggcgaagat gcggtcagcc
     4441 aacgggtcaa gctgctgcgc caggcactgg gcgatgacag ccgccggccg cgctacatcc
     4501 gttcggtacg cggg
//
LOCUS       DAOKIP010000265         4483 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.268,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000265 DAOKIP010000000
VERSION     DAOKIP010000265.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 4483)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4483)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4483
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.268"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            200..1678
                     /locus_tag="QEL58_003669"
     CDS             200..1678
                     /locus_tag="QEL58_003669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014646458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase 2 family
                     protein"
                     /protein_id="HDS1678095.1"
                     /translation="MDTALALDTAACDRARLARDARFDGVFFTAVRSTGIYCRPVCPA
                     PPPKPRNIAYYPTAAAAAAAGYRPCLRCRPELAPQAQQALAGQTVQRALALIHGGFLQ
                     EQPVADLAQRIGLSARQLQRLFVEHLGATPGQIHATHRLLLAKQLLTETTLPVTDVAL
                     AAGYNSLRRFNTAFLQGCGMAPTALRRQHQPLAADEGGLVLRLAYRPPLDFPRMLAFL
                     RKRSLPGIELIGEDSYQRVLGTPERPTLLRVTADPKRPELHLQLSAVDPRLIPDIVRR
                     VRRVFDLDADLQQVHAALSEEPLLARGIAERPGLRVPGGWDGFEVGVRAVLGQQVSVA
                     AATTFARRLVDAFGAHLPGMPSDFDRQFPAPEVLAEAPLESIGLPRSRAATVRALAAA
                     CASGQLDFGPGQALEEFVTRCVALPGIGPWTAQYIALRGLGQPDAFPAGDLVLQQVLG
                     HAQGQRLSERATEARSQPWRPWRAYAVLHLWHLSGTFVGEPT"
     gene            1675..2166
                     /locus_tag="QEL58_003670"
     CDS             1675..2166
                     /locus_tag="QEL58_003670"
                     /EC_number="2.1.1.63"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019337599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HDS1678096.1"
                     /translation="MTLLFDRFDSPIGVLTIAGDERGLAHVLFPENRHPARGRDDWHY
                     APDALPEARQQLLQFLHGERSSFDLELAPRGTPFQLRVWQALALIPFGQTWSYLQLAQ
                     HLGQPSATRAVGAANGRNPLPIILPCHRVIGSNGALTGFGGGLETKAALLRLEQRQAP
                     LFA"
     gene            2328..3578
                     /locus_tag="QEL58_003671"
     CDS             2328..3578
                     /locus_tag="QEL58_003671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HDS1678097.1"
                     /translation="MTSVRLTCALALLLPLAACTTAPAPSASVATPVAAAAPPKLLLI
                     SIDGLRADALDRGLTPNLQRLIDGGVRARWMTPSYPSLTFPNHYTIVTGLRPDHHGIV
                     NNSMDDEALGRFELSNREAVTTSAWWGGEPIWVGAENAGVRSATTSWPGSESEIRGVR
                     PSQWRIYDGQEPLEQRAGIVLDWLAQTDADAPRLTTLYMEHVDKAGHHYGPDSKQYAD
                     AIVRADQIVGQVLDGLQQRGLASTTNVIVVSDHGMASVADGHVIATESMADPAIARNV
                     SQGQSVGFAPVAGREADAERALLGRHAHYECWKKENLPPRWHYGTHPRVPSIVCAMDE
                     GWDALHRDRIAKRTKQDRGSHGYDNALPSMRAVFVAGGPSFRQGLVIDGFDNVDVYPL
                     LAHLLQVPAAPNDGNPETLKQTLR"
     gene            complement(3679..3858)
                     /locus_tag="QEL58_003672"
     CDS             complement(3679..3858)
                     /locus_tag="QEL58_003672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006450150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein THX"
                     /protein_id="HDS1678098.1"
                     /translation="MGKGDRKTAKGKRYNASYGNARSHTASKVAVGAAAPVAKKTVAK
                     APAKKAVAKKAVAKA"
     gene            complement(3969..4382)
                     /locus_tag="QEL58_003673"
     CDS             complement(3969..4382)
                     /locus_tag="QEL58_003673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010366931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MerC domain-containing protein"
                     /protein_id="HDS1678099.1"
                     /translation="MSLSSRLRHLLDRFGATGSMLCAVHCAVIPVLLAAAPSLGLSFW
                     LSDGVEQALVVFVTLLGLFSLVWGYRRHGALRALGFLIPGLVALWAGVLYDPLHHNAV
                     PHAVVMTIGGLLVGVAHLVNLRLNHGHVHDASCAH"
BASE COUNT          699 a         1637 c         1461 g          686 t
ORIGIN      
        1 agcggctggg ccggaccccg gaggggggtt tacggcgtgt cctgccagcc cacaccgccc
       61 cgccatccca cggactgcca gctcttgatt gagacgttga cgttgcgggt gcagggctgc
      121 aagccctgcc agtaccctct ccagcatcca tgtccgaatc cggcgagtat ccccacccgc
      181 acccgcctag actggcgcca tggacaccgc cctcgccctc gacaccgccg cctgtgaccg
      241 cgcccgcctg gcccgtgacg cgcgcttcga cggcgtgttc ttcaccgccg tgcgcagcac
      301 cggcatctat tgccgcccgg tatgccccgc gcccccgcca aagccgcgca acatcgccta
      361 ctacccgacc gccgctgcgg ccgctgcggc cggctaccgg ccgtgcctgc gctgccgtcc
      421 tgaactggcg ccccaggccc agcaggcgct cgccgggcag accgtgcaac gcgccctggc
      481 cctgatccac gggggcttcc tgcaggaaca accggtggca gatctcgcgc agcgcatcgg
      541 gctcagcgca cgccagctgc aacggctttt cgttgaacac ctgggcgcga cacccggaca
      601 aatccacgcc acccatcgcc tgctgctggc caagcagctg ttgaccgaaa ccacgctgcc
      661 ggtgaccgac gtcgcgctgg cagccggcta caacagcctg cgccgcttca ataccgcgtt
      721 cctccagggc tgcggcatgg cccccaccgc gctgcgccgc cagcatcaac cgctcgccgc
      781 cgatgagggc ggcctggtgc tgcgcctggc ctaccggccg ccgctggact tcccacgcat
      841 gctggcgttc ctgcgcaagc gcagcctgcc cggcatcgaa ctgatcggcg aagacagcta
      901 ccagcgcgtg ttgggcacgc ctgagcggcc caccctgctg cgcgtcaccg ccgatccgaa
      961 acggccggaa ctgcacctgc agctcagcgc cgtcgatccg cgcctgattc cggatatcgt
     1021 gcgccgcgtg cgccgcgtgt tcgatctgga tgccgacctg cagcaggtgc acgccgcgct
     1081 gagtgaggaa ccgctgctgg cgcgcggtat cgccgaacgc cccgggctgc gtgttccggg
     1141 cggctgggat ggtttcgaag tgggcgtgcg cgcggtgctc ggccagcagg tcagcgtcgc
     1201 cgcggccacc acgttcgcgc ggcgcctggt ggatgccttc ggcgcacacc tgccgggcat
     1261 gccatccgat tttgatcgcc agttccctgc gccagaggtg ctggccgagg caccgctgga
     1321 atcgatcggc ctgccgcgca gccgtgccgc cacggtgcgc gcgctggccg ccgcctgcgc
     1381 cagcggccag ctcgatttcg ggccgggcca ggcgctggaa gagttcgtca cccgctgcgt
     1441 ggcactgccc ggcatcggcc cgtggacggc gcagtacatc gccctgcggg gtctcggcca
     1501 gcctgatgcc ttccccgccg gcgacctggt gctgcagcag gtgctcggcc atgcgcaggg
     1561 ccagcgcctg agcgaacgtg cgaccgaagc acgctcgcaa ccctggcggc cgtggcgcgc
     1621 gtatgccgtg ctgcacctgt ggcacctgtc cggcactttc gttggagaac cgacatgacc
     1681 ctgttgttcg accgtttcga cagcccgatc ggcgtgctca ccatcgccgg tgacgagcgc
     1741 gggcttgcgc atgtgctgtt tccggaaaac cgccatccgg cgcgtggccg cgacgactgg
     1801 cactacgcgc cggatgcgct gccggaagcc cgccagcagt tgctgcagtt cctgcacggc
     1861 gaacgcagca gcttcgatct ggaactggca ccgcgcggca cgccgttcca gctgcgcgtg
     1921 tggcaagcgc tggcgctgat cccgttcggg cagacctgga gctacctgca gctggcgcag
     1981 catctgggcc agcccagcgc aacacgcgcg gtgggcgccg ccaacggccg caacccgttg
     2041 ccgatcatcc tgccctgcca tcgcgtgatc ggcagcaacg gcgcactgac cgggttcggc
     2101 ggtggactgg agaccaaggc cgcgctgctg cgcctggaac aacgccaggc accattgttt
     2161 gcatgagggc cggccgggct gcgtactgcg ttgccgtggg tatgtgtcga ccttggtcga
     2221 cacgggcgcg ccgacaggcg cggggataag gaagaatgtg cggacacgct tcgccctttg
     2281 gcgcagcgtg tcttgggccg gtcattgcgc cggcttatca tgcgcggatg acttccgtac
     2341 gcctgacctg cgcgctggcg ctgctgctgc cattggccgc ctgcaccacc gcgcccgccc
     2401 cttccgcctc cgttgccacg cccgtcgctg cggctgcgcc gccgaagctg ctgctgatct
     2461 ccatcgacgg cctgcgcgcc gacgcgctcg atcgcggcct gaccccgaac ctgcagcggc
     2521 tgatcgacgg tggcgtgcgt gcacgctgga tgaccccgtc ctatccgtcg ctgaccttcc
     2581 ccaaccacta caccatcgtc accggcctgc gcccggacca ccacggcatc gtcaacaaca
     2641 gcatggacga cgaggcactg ggccgtttcg aactgagcaa ccgcgaggcg gtcactacca
     2701 gcgcgtggtg gggcggcgag ccgatctggg tcggcgccga gaatgccggc gtgcgttcgg
     2761 ccaccacctc gtggccgggc agcgagtcgg aaatccgcgg ggtgcgcccg agccagtggc
     2821 gcatctacga cggccaggaa ccgctggaac agcgtgccgg catcgtgctt gactggctgg
     2881 cgcagaccga cgccgatgcg ccgcgcctga ccacgctgta catggagcac gtggacaagg
     2941 ccggccacca ctacggcccg gattcgaagc agtatgccga cgccatcgtg cgcgccgacc
     3001 agatcgtcgg ccaggtgctg gatggactgc agcagcgcgg gctggcgtcg acaaccaacg
     3061 tgatcgtggt gtccgaccat ggcatggcca gcgtcgccga cggccacgtg atcgccaccg
     3121 aatcgatggc cgatccggcc atcgcgcgca atgtcagcca gggccagtcg gtgggcttcg
     3181 caccggtcgc cggtcgcgaa gccgacgccg aacgcgccct gctcggccgc cacgcccact
     3241 acgaatgctg gaagaaggaa aacctgccgc cgcgctggca ctacggtacg cacccgcggg
     3301 tgccgtcgat cgtctgcgcc atggatgaag gctgggatgc cctgcatcgg gacaggatcg
     3361 ccaagcgcac caagcaggat cgcggttcgc atggctacga caacgccctg ccgtccatgc
     3421 gtgcggtgtt cgtggccggc ggcccgtcgt tccgccaggg cctggtgatc gatggcttcg
     3481 acaacgtcga tgtctatccg ctgctggcgc atctgctgca ggtgccggcc gcgccgaacg
     3541 acggcaaccc ggaaacgctg aaacagaccc tgcgctgacg ccgccgtaga gccgggccca
     3601 cgcccggctc agcgagcagg cataaaaaaa cgcggcgcca ggcgccgcgt ttttccttga
     3661 agcggtcgac cggccggatc aggccttggc gacagccttc ttcgccacag ccttcttcgc
     3721 cggagccttg gccacggtct tcttggcaac cggggcggcg gcgcctacgg cgaccttgct
     3781 cgcggtgtgc gaacgggcgt tgccgtagct ggcgttgtag cgcttgccct tggcggtctt
     3841 gcggtcaccc ttacccatgt cttcaactcc tcaagtgtga aatctggtta ccccgtactg
     3901 acacgggttc ggcggggccg ccttgctggg cgcccccgcg cacgatcgga aatcctatca
     3961 cggagcgcct agtgcgcgca gctggcgtcg tgcacgtggc cgtgattgag gcgcaggttg
     4021 accaggtgcg cgacgcccac caacaggcca ccgatggtca tcaccaccgc atgcggcacc
     4081 gcgttgtgat gcagcgggtc gtacagcacg ccggcccaca gcgcgaccag gcccggaatc
     4141 aggaaaccca gcgcgcgcag cgcaccatgc cggcgatagc cccagaccag gctgaacagc
     4201 ccgagcaggg tcacgaacac caccagcgcc tgctccacgc cgtcgctcaa ccagaacgac
     4261 aggcccagcg acggcgccgc cgccagcagc acggggatca ccgcgcaatg caccgcgcac
     4321 agcatcgaac cagtggcgcc gaatcggtcg agcaggtggc gcaggcgtga ggacagggac
     4381 atgacttcca gcagggtcgg cgaatcgtta tggaataata taacatccgt tcccgacccg
     4441 cacggtttcc ctccccctgt cccaccgacg ggattcgtgc gcc
//
LOCUS       DAOKIP010000266         4482 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.269,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000266 DAOKIP010000000
VERSION     DAOKIP010000266.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 4482)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4482)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4482
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.269"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..429)
                     /locus_tag="QEL58_003674"
     CDS             complement(<1..429)
                     /locus_tag="QEL58_003674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY domain-containing protein"
                     /protein_id="HDS1678100.1"
                     /translation="MLKSLTLATVAALAIAPAAQAAPLGMAQVEQTLRKAGYSQIHEI
                     ERDDGLWEADVSRADGRFSEVYVDPKTGEIFDEHSSRALLTTEQVLARAQAHGLREIH
                     SLERDGATWSLEARNARNQKVEVRLSGYDGRILHSERDGWL"
     gene            573..863
                     /locus_tag="QEL58_003675"
     CDS             573..863
                     /locus_tag="QEL58_003675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005411366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY domain-containing protein"
                     /protein_id="HDS1678101.1"
                     /translation="MLPTLTLLLALAGAPNAAAPTQDPAQQVARRAVQQGRYVPLEGV
                     VRDALRRYPGQLLEVELDDGVYEVEILRSDGVVVELDYDARNGKLLKTELDD"
     gene            863..1522
                     /locus_tag="QEL58_003676"
     CDS             863..1522
                     /locus_tag="QEL58_003676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008268075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDS1678102.1"
                     /translation="MRILLAEDDAALVQRLVPLLEQAGYVVHTVADGRQAEEIGQVED
                     LQAAIVDLGLPGLDGLSVIERWRGNGRSFPVLVLTARGRWHDKLAGFDAGADDYLTKP
                     FQADELVLRLRALIRRSHGHASPRLQCGPLQLDVNAGRFELDGQALALSPQEFRVLSY
                     FIHHSGSVISRDRLGEQVFEGGYDPDSNALDVLLGRVRRKLGTDLIHTVRGQGWRLAE
                     A"
     gene            1519..2847
                     /locus_tag="QEL58_003677"
     CDS             1519..2847
                     /locus_tag="QEL58_003677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HDS1678103.1"
                     /translation="MSARQPSLRRRLLLVAGIGLVLVSVLASVLLGELFKRSARDRLD
                     HELQQDMLTLLAQAEVDPEGQLRLRQEPNDARFQRVFSGAYWQIADQQGKVLLQSRSL
                     WDQTLAATADGPTQRNLPGPMQQSLRARVQQVRLPRAAQAYVAVVANDRSALDADVAA
                     FRQRTAIALAVLVAAWLAVLASQVHFGLRPLRGLRQQLERIRRGEAERIDRRQLDLEI
                     APLADELDALLDHHQRMVARARSSAEDLAHALKTPLSVLAAETQGDGRDWRRTLHEQG
                     ARMRASIDRYLAAGLAVDHRQRSEVAPAAEALCRLMTRVHAGRGIHFRVDVAPGLAFA
                     GAVTDLEEMLGNLLDNAGKWARHDVRLRALAQQDRLHIEVRDDGPGLDEAKLESVLQR
                     GVRLDERVEGSGLGLAIAADIAASHGGSLRLSNENPGLRARLELPLAPAD"
     gene            complement(2907..3227)
                     /locus_tag="QEL58_003678"
     CDS             complement(2907..3227)
                     /locus_tag="QEL58_003678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012512348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1678104.1"
                     /translation="MSARAIFHLFLHAAVPALLAWLFWRKRFASAWLLMLLGWIIDLD
                     HLLADPIYAPNRCSIGFHPLHTAPAIAVYAGLCVPKKTRLFGIGLMIHIVLDAIDCWW
                     MHHR"
     gene            complement(3271..>4482)
                     /gene="speA"
                     /locus_tag="QEL58_003679"
     CDS             complement(3271..>4482)
                     /gene="speA"
                     /locus_tag="QEL58_003679"
                     /EC_number="4.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012512349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biosynthetic arginine decarboxylase"
                     /protein_id="HDS1678105.1"
                     /translation="WKSLRDTEYADCLNLLHFHMGSQISNVRDIANGMREATRYFVEL
                     SRLGAKITHVDVGGGLGVDYEGTRSRSFCSINYGLHSYASNIVQPLANACEEFGLTPP
                     RIVTECGRAMTAHHAVLIANVSEVEEAQEGRVPDQHDDEPAAIRHLREIHDELDVRPA
                     VELFQEAQHFHAEGLASYALGQIDLPQRARIDDLFYAIAHGVRARLSYDEKSHRPVLD
                     ELNERLVDKYFVNFSVFESIPDVWAIDQVFPIVPIERLDETPDRRGIIADMTCDSDGM
                     VETYVENESLDSSLPLHKMKPGESYRIGFFMVGAYQEILGDIHNLFGDTDAVEVLADA
                     DGYAITQQRRGDTTDVMLDYVGYRLDELRATYAQRVAEAQLSPERAQELSDALEAGLT
                     GYTYLSDEPLV"
BASE COUNT          693 a         1501 c         1557 g          731 t
ORIGIN      
        1 cagccagcca tcgcgctcgc tgtgcaggat gcggccgtca tatccgctca ggcgcacctc
       61 caccttctgg ttgcgggcat tgcgcgcttc cagcgaccag gtcgcgccgt cacgttccag
      121 cgaatggatc tcgcgcaggc catgcgcctg cgcccgtgcc agtacctgct cggtggtcaa
      181 cagcgcgcgg ctgctgtgct catcgaagat ctcgccggtc ttcgggtcca cgtagacctc
      241 gctgaagcgg ccatcggcac ggctcacgtc ggcttcccac aggccgtcat cgcgctcgat
      301 ctcgtggatc tggctgtagc cggccttgcg cagggtctgt tcgacctggg ccatgcccag
      361 cggtgcggcc tgcgcggccg gtgcgatggc cagcgcagcg acggtggcga gagtgagcga
      421 cttcaacatg ggggttctcc tgttcgtggc cggatcatcc cggcaccgcc aagatgcatg
      481 ccccggttaa cagcgcctta gccgcggctg ttaggcaacg gttagtcgcc atcggcatac
      541 tcgcgccggt tccccttcct ggcgcagtca cgatgctccc caccctcacc ctgctgctgg
      601 ccctggccgg cgccccgaac gctgccgctc cgacccagga cccggcgcag caggttgcgc
      661 gccgtgccgt gcagcagggc cgttatgtgc cgctggaagg cgtggtgcgt gatgcgctcc
      721 ggcgctatcc gggccagctg ctggaagtgg agctggacga cggcgtctac gaggtggaga
      781 tcctgcgcag cgacggcgtg gtggtggagc tggattatga tgcgcgcaat ggaaagctgc
      841 tgaagacgga gctggacgac tgatgcgtat cctgctggcc gaagacgatg cggcgctggt
      901 tcaacggctg gtgcctttgc tggaacaggc cggctacgtc gtgcacacgg tggccgacgg
      961 gcgccaggcc gaggagatcg gccaggtcga ggacctgcag gccgcgatcg tcgatctggg
     1021 cctgcccggc ctggacgggc tgagcgtgat cgagcgctgg cgtggcaatg gccgcagctt
     1081 cccggtgctg gtgctgaccg cacgcgggcg ctggcacgac aaactggccg gcttcgatgc
     1141 cggcgccgac gactacctca ccaagccctt ccaggccgac gaactggtgc tgcgcctgcg
     1201 ggcgctgatc cgccgcagcc atggccatgc cagcccgcgc ctgcagtgcg gcccgttgca
     1261 gctggacgtc aatgctgggc gcttcgagct ggatgggcag gcgctggcgc tgagtccgca
     1321 ggagttccgc gtgttgagct acttcatcca ccacagcggc agcgtgatca gccgcgaccg
     1381 cctcggcgag caggttttcg aaggcggcta cgatcccgat tccaacgcgc tggacgtcct
     1441 gctcgggcgg gtacgccgca agctgggcac cgacctcatc cataccgtgc gcggccaggg
     1501 ttggcggctg gccgaggcat gagcgcgcgc cagccttcgc tgcgccgccg gctgctgctg
     1561 gtcgcgggca tcggcctggt gctggtctcg gtactggcca gcgtcctgct gggcgagctg
     1621 ttcaagcgca gcgcgcgtga ccgcctcgac cacgagctgc agcaggacat gctgaccctg
     1681 ctggcgcagg ccgaagtgga cccggaaggg cagctgcgcc tgcgccagga accgaacgac
     1741 gcccgcttcc agcgggtgtt ctccggtgcg tactggcaga tcgcggacca gcagggcaag
     1801 gtgctgctgc agtcgcgctc gctgtgggac cagaccctgg ccgccaccgc cgacggcccg
     1861 acccagcgca acctgcccgg gccgatgcag caatcactgc gcgcccgcgt gcagcaggtg
     1921 cgcctgcccc gtgcggcaca ggcctatgtc gccgtggtgg ccaacgaccg cagcgcactg
     1981 gatgccgatg ttgccgcgtt ccgccaacgc accgcgattg cgctggcggt gctggtggcc
     2041 gcgtggctgg cggtgctggc cagccaggtc catttcgggc tgcgcccgct gcgcggattg
     2101 cgccagcagc ttgagcgcat ccggcgtggc gaagccgaac gtatcgaccg ccgccagctc
     2161 gatctggaaa tcgcaccgct ggccgatgaa ctggacgccc tgctcgacca ccaccagcgc
     2221 atggtggcgc gtgcgcgcag cagtgcggaa gatctcgccc atgcactgaa gacgcccctg
     2281 agcgtgctgg ccgccgagac acagggcgac ggccgcgact ggcggcgtac gctgcacgaa
     2341 cagggtgcgc gcatgcgcgc cagcatcgac cgctatctgg ccgccggcct ggcggtggac
     2401 caccggcagc gcagcgaggt ggcccccgcc gccgaagcgc tgtgccggct gatgacccgc
     2461 gtgcacgccg gccgtggcat ccacttccgg gtggacgtgg cccccgggct ggccttcgcc
     2521 ggtgccgtga ccgatctgga agaaatgctg ggcaacctgc tggacaacgc cggcaagtgg
     2581 gcccgccacg atgtgcggct gcgcgccctg gcccagcagg accggctgca cattgaagtg
     2641 cgcgacgacg gccccggcct ggacgaggcg aagctggaga gcgtgttgca gcgtggcgta
     2701 cgcctggacg aacgggtgga aggcagcggc ctggggctgg ccatcgcagc cgacatcgcc
     2761 gccagccacg gcggctcact gcgcctgtcg aacgaaaacc ccggattgcg cgcgcggctg
     2821 gaactgccgc tggcgccggc tgactaggtc gaggcgggac ggacccaggc gcagccgagc
     2881 gtgggctcgg ctcagcacgt cactcatcag cggtggtgca tccaccagca atcgatcgcg
     2941 tccagcacga tgtggatcat caacccgatg ccgaacaacc gcgtcttctt cggcacgcac
     3001 agaccggcat agaccgcgat ggccggcgcg gtgtgaagcg ggtggaagcc gatgctgcaa
     3061 cggtttggcg cgtagatcgg atcggccagc aggtggtcca gatcgatgat ccagcccagc
     3121 agcatcagca gccacgccga agcgaaacgc ttgcgccaga acagccatgc cagcagggct
     3181 ggcacggcgg catgcaggaa cagatggaag atcgcgcgtg cgctcatcag ggccggcagc
     3241 gccgggccat gcccggcgtt tccttcgacg tcagaccagc ggttcgtcgg acaggtaggt
     3301 gtaaccggtc aggccggctt ccagcgcgtc cgacagttcc tgcgcacgtt ccggcgacag
     3361 ctgggcctcg gccacgcgct gtgcgtaggt ggcacgcagt tcgtccaggc ggtagcccac
     3421 gtagtccagc atcacgtcgg tggtatcgcc acggcgctgc tgggtgatgg catagccatc
     3481 ggcatcggcc agcacttcca ccgcgtcggt gtcgccgaac aggttgtgga tgtcgcccag
     3541 gatttcctgg taggcgccga ccatgaagaa accgatgcga tagctctcgc ccggcttcat
     3601 cttgtgcagc ggcagcgagc tgtccaggct ctcgttctcg acgtaggttt ccaccatgcc
     3661 gtccgagtcg caggtcatgt cggcgatgat gccgcgacgg tccggggttt cgtccaggcg
     3721 ctcgatcggc acgatcggga acacctggtc gatcgcccac acgtccggga tcgattcgaa
     3781 cacgctgaag ttgacgaagt acttgtcgac cagccgctcg ttcaactcat ccagcaccgg
     3841 gcggtggctc ttctcgtcat agctcaggcg cgcacgcacg ccgtgggcga tggcgtagaa
     3901 cagatcgtcg atgcgcgcac gctgcggcag gtcgatctgg cccagcgcgt agctggccag
     3961 gccttcggcg tggaagtgct gtgcttcctg gaacagttcc accgccgggc gcacgtccag
     4021 ctcgtcgtgg atctcgcgca ggtggcggat cgccgccggc tcgtcgtcgt gctggtccgg
     4081 cacgcggcct tcctgcgcct cttccacttc cgagacgttg gcgatcagca ccgcgtggtg
     4141 cgcggtcatc gcgcggccgc actcggtgac gatgcgcggc ggggtcaggc cgaactcttc
     4201 gcaggcattg gccagcggct gcacgatgtt gctggcgtag gaatgcaggc cgtagttgat
     4261 cgagcagaag ctgcgcgaac gggtgccttc gtaatccacg cccaggccac cgcccacgtc
     4321 gacgtgggtg atcttcgcgc ccaggcgcga cagctccacg aagtagcggg tggcttcgcg
     4381 catgccgttg gcgatgtcgc gcacgttgga gatctgcgag cccatgtgga agtgcagcag
     4441 gttcaggcag tcggcgtact cggtgtcacg cagcgacttc ca
//
LOCUS       DAOKIP010000267         4453 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.270,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000267 DAOKIP010000000
VERSION     DAOKIP010000267.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 4453)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4453)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4453
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.270"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            139..675
                     /locus_tag="QEL58_003680"
     CDS             139..675
                     /locus_tag="QEL58_003680"
                     /EC_number="2.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019338396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenine phosphoribosyltransferase"
                     /protein_id="HDS1678106.1"
                     /translation="MTDALVAPQWASRLRDIADFPKPGILFKDIMPLLAHGDDFRGAI
                     TAMADRWRDQKLDAVVGIESRGFILGAAMALELGVGFVPVRKPGKLPGQVLREEYTLE
                     YRSDCIEVHADALPAGARVAIIDDVLATGGTLVAALSLVRRLGVDVVGAGVLVELNGL
                     GGRARWEADLPLHTELVF"
     gene            complement(850..2226)
                     /gene="dbpA"
                     /locus_tag="QEL58_003681"
     CDS             complement(850..2226)
                     /gene="dbpA"
                     /locus_tag="QEL58_003681"
                     /EC_number="3.6.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014090365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RNA helicase DbpA"
                     /protein_id="HDS1678107.1"
                     /translation="MTDFSTLPLSPALQPGLDALGYTTLTPVQAQSLPAILDGRDVIA
                     QAPTGSGKTAAFGLGLLQSIDPSLIRVQALVLCPTRELADQVGKQIRKLATGIPNLKL
                     LLLVGGVPLGPQLASLEGHDPHVVVGTPGRVQELARKRALNLGAVRTLVLDEADRMLD
                     MGFEEPIREIAGRTHKDRQSLLFSATFPDSIRAMARDLLRDAVEVTVEGADQAPAIRH
                     LFCEVEPAHRQKALAGLLLKYTPESAVVFCNTRKDVDEVANSLQQFGFSALALHGDME
                     QRDREEVLLLLANRSCNVLVASDVAARGLDVEELAAVINYELPTDVESYQHRVGRTGR
                     AGASGLAISLVAGREKTRAEAIEAQMGQPLDWQKTPLATSRPAELPQAAMRTLRIDGG
                     KTDKLRPGDILGALTGDAGLSSKFIGKIAIFPTRSYVAIAREQANKAVAKLEAGKIKG
                     RRFRVRMM"
     gene            complement(2311..3390)
                     /locus_tag="QEL58_003682"
     CDS             complement(2311..3390)
                     /locus_tag="QEL58_003682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019338397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YeiH family putative sulfate export transporter"
                     /protein_id="HDS1678108.1"
                     /translation="MNAPALSPWSLPALRQRWQPRLPGLLLVGLIAAASLYLAELPWL
                     QAHGLSALTVAIVAGIVVGNTLYPRLAPSSAAGVGFSKHWLLRAGIVLYGLRLTFQDI
                     GHVGVSGVLMDVLVVASTFGLACWLGVRVFRMEREAAMLIGAGSAICGAAAVMAAEPV
                     VRGRAAQVTVAVSTVVVFGTLAMFLYPALYALVQSHGWLAMDARQYGLFTGATVHEVA
                     QVVAAGRAVSEAAADTAVITKMVRVMLLAPFLVALSLWLARGGKASADGSKARIVVPW
                     FAFGFVAVAGFNSLHLLPAGLQAGLVQLDTVLLAMAMAALGLTTHVSALRQAGLKPLL
                     LALILFAWLLFGGLAIHQGVLAVLG"
     gene            3493..4368
                     /locus_tag="QEL58_003683"
     CDS             3493..4368
                     /locus_tag="QEL58_003683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014646840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDS1678109.1"
                     /translation="MRLTLRQLQVFVAIADYGSTTAAGQAIALSQSASSAALQELEAH
                     FGTPLFDRIGRRLALNGHGRALLEPARTLLVNAADLERQLAAGGDPAQGAPLRLVLAA
                     STTIGNYLLPPRIAELLRQAPQAEVDLRIDNSAGVVAAVQRLDVDAGLIEGPCHERGL
                     QVTAWQQDPLVIVAAADAPARWTMDELRSARWLLREPGSGTREAVEQALLPHLRGFAQ
                     TLQLGNTEAIKQAAIAGLGLACLSRHALEEPLALGRLRVLETPLPTLQRTLWLVRHPG
                     KHWLPGLQALLGEVG"
BASE COUNT          713 a         1562 c         1499 g          679 t
ORIGIN      
        1 cggaatgcgg cttttgcttt cgactttgct tgcgcgttgg cctctgcagg cgccgggcgc
       61 agcccggccg agacccctca acaggcaggc aacggccgga acaggtaccc tatgccgcca
      121 tcagatagcc aacgtgacat gaccgacgcc ctcgtcgctc cgcagtgggc ctcccgcctg
      181 cgcgacatcg ccgacttccc caagcccggc atcctcttca aggacatcat gccgctgctc
      241 gcccacggcg atgacttccg tggtgcgatc accgcgatgg ccgaccgttg gcgcgaccag
      301 aagctggacg cggtggtcgg cattgaatcg cgtggcttca tcctcggcgc cgcgatggcg
      361 ctggaactgg gcgtgggctt cgtgccggta cgcaagccgg gcaagctgcc gggccaggtg
      421 ctgcgcgagg agtacacgct ggaataccgc agcgactgca tcgaggtgca cgccgatgcg
      481 ctgccggctg gcgcccgcgt cgcgatcatc gacgacgtgc tggcgaccgg cggcacgctg
      541 gtcgccgcgt tgtcgctggt gcgccgcctg ggtgtcgacg tggtcggcgc cggcgtgctg
      601 gtcgagctga acggcctggg tggccgtgcc cgctgggaag cggatctgcc gctgcacact
      661 gaactggtgt tctgatcgta gggtgagtgc caaccaaggt tggcacctac cagagcgaac
      721 cgccgtgaac cggtagttgc caaccttggt tggcatcgct tttcgcaacc gacgccatgg
      781 acgggccaac caaggttggc cgctaccagg tcatgccgtt gccaaccgtg gttggcaacg
      841 ctgcttcaat cacatcatcc gcacgcggaa tcgacggccc ttgatcttgc cggcttccag
      901 cttcgccacg gccttgttgg cctgctcgcg cgcgatcgcc acgtaggagc gggtcgggaa
      961 gatcgcgatc ttgccgatga acttgctcga caggccggcg tcaccggtca gtgcgccgag
     1021 gatatcgccc gggcgcagct tgtcggtctt gccaccatcg atgcgcagcg tgcgcattgc
     1081 cgcctgcggc agctcggccg ggcgcgaggt tgccagcggc gttttctgcc agtccagcgg
     1141 ctgacccatc tgcgcttcga tcgcttcggc acgggtcttc tcgcggccgg ccaccaggct
     1201 gatcgccagg ccactggcac cggcacggcc ggtacggccc acgcggtgct ggtagctctc
     1261 cacgtcggtc ggcagttcgt agttgatcac cgccgccagc tcttccacgt ccagcccgcg
     1321 cgcggccacg tcgctggcca ccaacacgtt gcagctgcgg ttggccagca gcagcagcac
     1381 ttcctcgcgg tcgcgctgtt ccatgtcacc gtgcagggcg agggcggaga agccgaactg
     1441 ctgcagcgag ttggctactt cgtccacgtc cttgcgggtg ttgcagaaca ccaccgccga
     1501 ttcgggcgtg tacttcagca gcaggccggc cagtgccttc tggcggtgcg ccggttccac
     1561 ctcgcagaac aggtggcgga tcgccggtgc ctggtcggcg ccttccacgg tcacttccac
     1621 cgcgtcgcgc agcaggtcac gcgccatggc gcggatgctg tcggggaagg tggccgagaa
     1681 cagcaggctc tggcggtcct tgtgggtgcg accggcgatc tcgcggatcg gctcctcgaa
     1741 gcccatgtcg agcatgcggt cggcctcgtc cagcaccagc gtgcgcaccg cacccaggtt
     1801 caacgcgcgc ttgcgcgcca gttcctgcac gcggccgggg gtaccgacca ccacgtgcgg
     1861 atcgtggcct tccagcgacg ccagctgcgg gcccagcggc acgccaccca ccagcagcag
     1921 cagcttcagg ttgggaatgc cggtggccag cttgcggatc tgcttgccga cctggtcggc
     1981 cagttcgcgg gtcgggcaca gcaccagcgc ctgcacgcgg atcaggctgg ggtcgatgga
     2041 ctgcagcagg cccaggccga aggcggcggt cttgccgctg ccggtcggcg cctgtgcgat
     2101 cacatcacgg ccatcgagga tggccggcag gctctgcgcc tgcacggggg tgagggtggt
     2161 gtagccgagg gcatccaggc cgggctgcag ggccgggctc agcggcaggg tcgagaagtc
     2221 agtcatggcg cattgtaacc gtccgcgcgg cagctcccgt cctggggcct tcatccatgt
     2281 gggtgccgac cttggtcggc acactcctgc tcagcccagc accgccagca cgccctggtg
     2341 gatcgccagc ccaccgaaca gcagccaggc gaacaggatc agcgccagca gcagcggctt
     2401 cagcccagcc tggcgcagcg ccgagacgtg ggtggtcagg ccgagtgcgg ccatcgccat
     2461 cgccagcagc accgtatcca gctgcaccag cccggcctgc aaaccagccg gcagcagatg
     2521 cagcgagttg aacccggcca ccgccacgaa accaaacgcg aaccacggca ccacaatgcg
     2581 cgccttgctg ccgtcggcgc tggccttgcc accacgcgcc agccacagcg acagtgcgac
     2641 caggaacggt gccagcagca tcacccgcac catcttggtg atcactgcgg tatcggccgc
     2701 cgcttcgctg accgcacggc ctgcggccac cacctgcgcc acttcatgca ctgtcgcgcc
     2761 ggtgaacagg ccgtactggc gtgcgtccat ggccagccag ccgtgtgact gcaccagtgc
     2821 atacagcgcg gggtacagga acatcgccag cgtgccgaac accaccaccg tcgacaccgc
     2881 gacggtgacc tgcgccgcac ggccgcgcac caccggctcg gcagccatca ccgccgccgc
     2941 gccgcagatt gcgctgccgg caccgatcag cattgccgcc tcgcgctcca tcctgaaaac
     3001 acgcacaccc agccagcagg ccaggccgaa ggtgctggcc actaccagca cgtccatcag
     3061 cacgccgctg acgccgacat ggccgatgtc ctggaaggtc aggcgcaggc catacagcac
     3121 gatgccggca cgcagcagcc agtgcttgga aaagccgaca ccggctgcgc tgctcggggc
     3181 cagccgcggg tagagggtgt tgccgaccac gatgccggcg acgatggcca cggtcagcgc
     3241 gctcaggccg tgcgcctgca gccacggaag ctcggccagg tatagcgagg ccgcagcgat
     3301 caggcccacc agtagaaggc cgggcaggcg cggttgccag cgttggcgca gggcgggcag
     3361 ggaccagggg gagagggcag gggcgttcat gacggggacg gggctgaagt agtggcgcca
     3421 gcgtgcgcct gtgtgattga cctgtaaaac gaataatatg ggtgaaagct acctatcaag
     3481 cgggtaattg tcatgcgcct gaccttgcgc cagctgcagg tcttcgtcgc catcgctgac
     3541 tacggcagca ccaccgctgc gggccaggcc atcgcgctct cgcagtcggc cagcagcgcc
     3601 gccctgcagg agttggaggc acatttcggc accccgctgt tcgaccgcat cggccgtcgc
     3661 ctggccctga acgggcatgg ccgcgcgctg ctggagccgg cgcgcacgct gctggtcaat
     3721 gccgccgacc tggagcggca gctggccgcg ggcggcgacc cggcgcaggg cgcacccctg
     3781 cggctggtgc tggccgccag taccaccatc ggcaactacc tgttgccgcc gcgcatcgcc
     3841 gagctgctgc ggcaggcgcc gcaggccgag gtcgacctgc gcatcgacaa cagtgccggc
     3901 gtggttgccg ccgtgcagcg gctggacgtc gacgcgggcc tgatcgaggg cccgtgccac
     3961 gagcgtggcc tgcaggtcac cgcctggcag caggatccgt tggtgattgt cgcggccgcc
     4021 gacgccccgg cgcgatggac gatggatgaa ctgcgcagcg cccgctggct gctgcgcgaa
     4081 cccggctccg gtacccgcga agccgtcgaa caggccctgc tgccgcacct gcgcggattc
     4141 gcccagaccc tgcagctggg caataccgaa gcgatcaagc aggccgccat cgccggcctc
     4201 ggcctggcct gcctctcgcg ccacgcgctg gaagagccgc tggctctcgg ccgcctgcgc
     4261 gtgctggaga ccccgctgcc caccctgcag cgcaccctgt ggctggtacg ccacccgggc
     4321 aagcactggt tgccgggctt gcaggcgttg ttgggggaag tggggtaagc catcagattc
     4381 ccatgtgccg accaaggtcg acacccacca gagcagaatg ccgttccaac agatcgcgat
     4441 gaaccgtcag agg
//
LOCUS       DAOKIP010000268         4393 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.271,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000268 DAOKIP010000000
VERSION     DAOKIP010000268.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 4393)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4393)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4393
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.271"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(6..827)
                     /locus_tag="QEL58_003684"
     CDS             complement(6..827)
                     /locus_tag="QEL58_003684"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011037311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="kinase/pyrophosphorylase"
                     /protein_id="HDS1678110.1"
                     /translation="MSTIRPVFYVSDGTGITAETIGHSLLTQFSGFSFITDRMSFVDD
                     PEKAREACARIQAAGERYQVRPIVVNSCVDQSLSLILADSGALMLDVFAPFIEPLERE
                     LASPRLARVGQAHGMVDFDTYHRRINAMNFALTHDDGIAVNYDDADVILVAVSRAGKT
                     PTCIYLALHYGVRAANYPLTDEDLESDRLPPRLRNYRRKLFGLTIDPDRLQQIRQERR
                     PNSRYANLDTCKREVAAAEVMFQMERIPTLSTTHTSIEEISSKVLATLGLQRELY"
     gene            973..3351
                     /gene="ppsA"
                     /locus_tag="QEL58_003685"
     CDS             973..3351
                     /gene="ppsA"
                     /locus_tag="QEL58_003685"
                     /EC_number="2.7.9.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015463160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate synthase"
                     /protein_id="HDS1678111.1"
                     /translation="MNENILWLHELRLADLARVGGKNSSLGEMIGNLAGLGVSVPGGY
                     ATTAEAFKDFIAHNDLSKRIFDKLATLDVEDVNALTAAGKEIRTWVIDAPLQPQLDQD
                     IRTAYAQLSADNGGGDVAVAVRSSATAEDLPDASFAGQQETFLNVTGADDVVHKVKEV
                     FASLYNDRAIAYRVHHGFKHEDVFLSAGVQLMVRSGVGSSGVLFTLDTESGFRDVVFV
                     TSSFGLGEMVVQGAVNPDEYYVYKPTLQAGKPAILRRSLGSKAIRMVYSDVPGERVRI
                     EDTPAELRNTFSISDEDVQELSKQALVIEKHYGRPMDIEWAKDGVSGKLFIVQARPET
                     VKSRSHATQIERFALTEKGGNVLAEGRAVGAKIGSGVARVVKTLDDMNRVQPGDVLIA
                     DMTDPDWEPVMKRASAIVTNRGGRTCHAAIIARELGVPAVVGSGNATKVIEDGQLVTV
                     SCAEGDTGFIYEGKLGFERTTTDLGNMPPAPLKIMMNVANPERAFDFGQLPNAGIGLA
                     RLEMIIASHIGIHPNALLEYDRQDAATKKKIDEKIAGYSDPVGFYVDRLAEGIATLTA
                     SVAPNAVIVRLSDFKSNEYANLIGGSNYEPHEENPMIGFRGASRYVDPSFSAAFALEC
                     KAVLRVRNEMGLDNLWVMIPFVRTLEEGRKVIEVLEQNGLKQGENGLKIIMMCEVPSN
                     ALLADEFLEIFDGFSIGSNDLTQLSLGLDRDSSIVAHLFDERNPAVKKLLSMAIKAAR
                     AKGKYVGICGQGPSDHPDLAEWLMQEGIESVSLNPDTVVDTWLRLAKLKANG"
     gene            3502..>4393
                     /locus_tag="QEL58_003686"
     CDS             3502..>4393
                     /locus_tag="QEL58_003686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014647554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel"
                     /protein_id="HDS1678112.1"
                     /translation="MIAAAAPAPAATPWFHSLDWERLLETYGVPLLAAIVVLLVGMWV
                     ARRLSNAMPRATARMGVDPMLGSFLRNVVYAASLVIVVVLAIGTLGVQITPLLAVLGT
                     AGLAVGLALKDSLSNIASGVMLVTLRPFRVGDVVIVAGQTGTVREVRIFQTVITGADN
                     QHTTIPNTLITAAPIINLTAEPTRRVELVIGIGYEDNIQLARDTALALMKADPRVLQT
                     PVPDVVVYELGAHAINLGIRCYVKSADWFGTKVTLLEQLKLGFDKAGINIPYPQQDMH
                     LYLHGKDGGVVEADALVRDKP"
BASE COUNT          781 a         1460 c         1425 g          727 t
ORIGIN      
        1 caggatcaat acagctcgcg ctgcagcccc agcgtggcca gcaccttgct ggaaatctcc
       61 tcgatcgagg tgtgggtggt gctcagggtc ggaatgcgct ccatctggaa catcacttcg
      121 gccgcggcca cctcgcgctt gcaggtatcc aggttggcgt agcgcgaatt cgggcgccgt
      181 tcctggcgga tctgctgcag gcggtccggg tcgatggtca gcccgaacag cttgcgccgg
      241 tagttgcgca ggcgcggcgg caggcggtcg ctttccaggt cttcgtcggt cagcgggtag
      301 ttggccgcgc gcacgccgta atgcagggcc aggtagatgc aggtaggcgt cttgccggcg
      361 cgcgacaccg ccaccaggat cacgtcggca tcgtcgtagt tcaccgcgat gccatcgtca
      421 tgggtcaggg cgaagttcat cgcgttgatg cggcggtggt aggtgtcgaa atcgaccatg
      481 ccgtgggcct ggccgacccg cgccaggcgc gggctggcca gctcgcgttc cagcggctcg
      541 atgaacggtg cgaacacatc cagcatcagc gccccgctgt cggccaggat caggctcagg
      601 ctctggtcca cgcaggagtt caccacgatc ggccggacct ggtaccgctc ccctgccgcc
      661 tggatccggg cacaggcttc acgcgccttt tcggggtcgt cgacaaacga catgcggtcg
      721 gtaatgaagc tgaacccgga gaactgggtc agcaggctat gcccaatggt ttcagcggtg
      781 ataccggttc catcggaaac gtagaacacc ggacggatgg tcgacatgcg cgcttttacc
      841 ccctacgaag cctaaaaagg ccgtcagcac aagcttgtgc cgacggtggt ctgcccggca
      901 tcatatcggc ttcttcctac ggacgcggcc attccagccc gcctcgggcg atggccaaac
      961 ggagcatcgc gcttgaacga gaacatcctg tggttgcacg aactgcgtct ggccgacctg
     1021 gcccgcgtag gcggcaagaa ttcgtcgctg ggcgagatga tcggcaacct tgccggtctg
     1081 ggcgtgtcgg tgccgggcgg ttatgccacc accgctgaag ccttcaagga cttcatcgcg
     1141 cacaacgacc tgtccaagcg catcttcgac aagctggcca cgctggacgt cgaggacgtc
     1201 aacgcgctga ccgccgcggg caaggaaatc cgcacctggg tgatcgatgc cccgctgcag
     1261 ccgcagctgg accaggacat ccgcaccgcc tacgcccagc tgagcgccga caacggcggc
     1321 ggcgacgtgg ccgtggccgt gcgctcgtcg gccacggccg aggatctgcc ggatgcgtcc
     1381 ttcgccggcc agcaggaaac cttcctcaac gtcaccggtg ccgacgatgt cgtgcacaag
     1441 gtcaaggaag tgttcgcctc gctgtacaac gaccgcgcca tcgcctaccg cgtgcaccac
     1501 ggcttcaagc atgaagacgt gttcctgtcg gccggcgtgc agctgatggt gcgttcgggc
     1561 gtcggttcct ccggcgtgct gttcaccctg gacaccgagt ccggcttccg cgacgtcgtg
     1621 ttcgtcacct cttcgttcgg cctgggcgag atggtcgtgc agggcgcggt caacccggac
     1681 gagtactacg tctacaagcc caccctgcag gccggcaagc cggcgatcct gcgccgctcg
     1741 ctcggcagca aggcgatccg catggtgtat tcggatgtcc ccggcgagcg cgtcaggatc
     1801 gaggacaccc cggccgaact gcgcaacacc ttctcgatca gcgacgagga cgtgcaggaa
     1861 ctgtccaagc aggccctggt catcgaaaag cactacggcc gcccgatgga catcgagtgg
     1921 gccaaggacg gtgtcagcgg caagctgttc atcgtgcagg cgcgcccgga aacggtgaag
     1981 tcgcgcagcc acgcgaccca gatcgagcgc ttcgcgctga ccgagaaggg cggcaacgtg
     2041 ctggccgagg gccgcgccgt cggcgccaag atcggttcgg gcgtggcccg cgtggtcaag
     2101 acgctggacg acatgaaccg cgtgcagccg ggcgacgtgc tgatcgccga catgaccgac
     2161 cccgactggg agccggtgat gaagcgcgcc tcggccatcg tcaccaaccg cggtggccgc
     2221 acctgccacg ccgcgatcat cgcgcgcgag ctgggcgtgc cggccgtggt cggttcgggc
     2281 aacgcgacca aggtcatcga agatggccag ctggtcaccg tcagctgcgc tgaaggcgat
     2341 accggcttca tctacgaagg caagctcggt ttcgagcgca ccaccaccga tctgggcaac
     2401 atgccgccgg caccgctgaa gatcatgatg aacgtggcca acccggaacg tgccttcgac
     2461 ttcggccagc tgccgaacgc cggcatcggc ctggcccgcc tggaaatgat catcgccagc
     2521 cacatcggca tccacccgaa cgcgctgctg gaatacgacc gccaggacgc ggcgacgaag
     2581 aagaagatcg acgagaagat cgccggttat tccgacccgg tcggcttcta cgtggaccgc
     2641 ctggccgaag gcatcgccac cctcaccgcc tcggtcgcac cgaacgcggt gatcgtgcgc
     2701 ctgtcggact tcaagtccaa cgagtacgcc aacctgatcg gcggcagcaa ctacgagccg
     2761 cacgaagaga acccgatgat cggcttccgc ggcgccagcc gttacgtcga cccgagcttc
     2821 tcggccgcct tcgcgctgga gtgcaaggcc gtgctgcgcg tgcgcaacga aatgggcctg
     2881 gacaacctgt gggtcatgat tccgttcgtg cgcaccctgg aagaaggccg caaggtcatc
     2941 gaggtgctgg aacagaacgg cctgaagcag ggcgagaacg gcctgaagat catcatgatg
     3001 tgcgaagtgc cgtccaacgc actgctcgcc gatgagttcc tggagatctt cgatggcttc
     3061 tcgatcggct ccaacgacct gacccagctc agcctgggcc tggaccgcga ttcgtcgatc
     3121 gtcgcgcacc tgttcgacga acgtaacccg gccgtgaaga agctgctgtc gatggccatc
     3181 aaggccgcac gcgccaaggg caagtacgtc ggcatctgcg gccagggccc gtccgatcat
     3241 ccggatctgg ccgaatggct gatgcaggaa ggcatcgagt cggtgtcgct gaacccggac
     3301 accgtggtcg acacctggct gcgcctggcc aagctgaagg ccaacggctg atgccctgaa
     3361 ggccgcaggc tgacgtcgtg ttcatcggcg tcggcccata ctgctgctgc acgcaagccc
     3421 cgcctctgcg gggcttcgtg tttctggcgt ccacgcacgc cctgccccgc gcagacttcc
     3481 cccgcagcaa aggacttccg catgatcgcc gccgcagcgc ccgcccccgc cgcaacgccc
     3541 tggttccatt cgctcgactg ggagcgcctg ctggagacct acggtgtacc gttgctggcc
     3601 gccatcgtcg tgctgctggt cggcatgtgg gtggcacgac gcctgtccaa tgcgatgccg
     3661 cgcgccaccg cgcggatggg cgtggacccg atgctgggca gcttcctgcg caacgtggtg
     3721 tacgccgcat cgctggtgat cgtggtggtg ctggcgatcg gcacgctggg cgtgcagatc
     3781 accccgctgc tggccgtact cggcaccgct ggcctggccg tgggtctggc actgaaggac
     3841 tcgctgtcca acatcgcatc gggcgtgatg ctggtgacgc tgcgcccgtt ccgggtcggc
     3901 gatgtggtga tcgtggccgg gcagaccggc actgtgcgcg aagtgcgcat cttccagacc
     3961 gtcatcaccg gcgcggacaa ccagcacacc accattccga acacgctgat caccgcggca
     4021 ccgatcatca acctcactgc cgaaccgacc cgccgcgtcg agctggtgat cggcatcggc
     4081 tacgaagaca acatccagct ggcgcgcgac accgcgctgg cactgatgaa ggccgatccg
     4141 cgcgtgctgc agacgccggt accggacgtg gtggtgtacg agctgggcgc gcacgccatc
     4201 aacctcggca tccgctgcta cgtgaagtcg gccgactggt tcggcaccaa ggtcacgctg
     4261 ctggaacagc tcaagctggg cttcgacaag gccggcatca acattccgta cccgcagcag
     4321 gacatgcacc tgtacctgca tggcaaggat ggcggcgtgg tcgaggccga tgcactggtg
     4381 cgcgacaagc cct
//
LOCUS       DAOKIP010000269         4384 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.272,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000269 DAOKIP010000000
VERSION     DAOKIP010000269.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 4384)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4384)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4384
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.272"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            103..3567
                     /gene="mfd"
                     /locus_tag="QEL58_003687"
     CDS             103..3567
                     /gene="mfd"
                     /locus_tag="QEL58_003687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014090633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription-repair coupling factor"
                     /protein_id="HDS1678113.1"
                     /translation="MSRTSYPAPPLPRAGQLRAWWRAPASPTALAWYLAQAARAHDAP
                     LLVIARDNHGANQLEADLQTLLGGDPALPVVAFPDWETLPYDRFSPHPDIISQRLAAL
                     HRLPALKRGLVIVPVQTLLQQLAPRSYVIGGSFDLKVGQRLDLEAEKRRLESAGYRNV
                     PQVMDPGDFAVRGGLLDVYPMGADEPLRVELLDEDIDSIRAFDPESQRSLDKVEAVHM
                     LPGREVPMDEASIARVLATLRERFDVDTRRSALYQDLKSGLAPAGVEYYLPLFFERTA
                     TLFDYLPSGSLPVVCAGAGEAAETFWAQTGERYEQRRHDVERPLLPPSALYLSPELLR
                     ERLNDAPRIEVWSADHARIADAHALGDQPLPPLPVAAREAPAGDALKSFLGHYPGRVL
                     IAADSPGRREALLEVLQAAELKPPVVADLPSFLAGDARFAIAVAPLEDGFALDDPRIA
                     VLTERQLFPERAGSARRTRRAGREPEAIIRDLGELTEGAPIVHEDHGVGRYRGLIAMD
                     VGGMPGEFLEIEYAKGDRLYVPVAQLHLISRYSGASAETAPLHSLGGEQWSKAKRKAA
                     EKVRDVAAELLEIQARRQARAGLALQVDRAMYEPFAAGFPFEETPDQLAAIDATLRDL
                     ASSQPMDRVVCGDVGFGKTEVAVRAAFAAASAGKQVAVLVPTTLLAEQHFRNFRDRFA
                     DYPMKVEVLSRFKTSKEIKAELEKVAAGTIDVIVGTHRLLQPDVKFKDLGMVIVDEEQ
                     RFGVRQKEALKALRANVHLLTLTATPIPRTLNMAMAGLRDLSIIATPPPNRLAVQTFI
                     TQWDNALLREAFQRELARGGQLYFLHNDVESIGRMQRELSELVPEARIGIAHGQMPER
                     ELEKVMLDFQKQRFNVLLSTTIIESGIDIPNANTIIINRADRFGLAQLHQLRGRVGRS
                     HHRAYAYLVAPDRRSITPDAEKRLEAIASMDELGAGFTLATHDLEIRGAGELLGEDQS
                     GQMAEVGFSLYTELLERAVRSIKQGKLPDLDAGEEVRGAEVELHVPALIPEDYLPDVH
                     TRLTLYKRISSARDSDALRELQVEMIDRFGLLPDAAKHLFAIAELKLKANTLGIRKLD
                     LGENGGRIVFESKPNIDPMAVIQLIQKQPNLYAMEGPDKLRIKHPLPLPEDRFNAARA
                     LLTTLAPG"
     gene            3612..4229
                     /locus_tag="QEL58_003688"
     CDS             3612..4229
                     /locus_tag="QEL58_003688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014646442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HDS1678114.1"
                     /translation="MPMFPDAVPAPDLLHAQACLIDALSMSLQMRDAYTRHHCDRVGL
                     LAQRLAAHCDLDTEACEQIGLAARFHDIGKIGIPDDVLLAPRRHTDEERAIMREHPVR
                     GEHIFLATGRSDAAPVARLIRAHHEAFDGSGYPDGLRGESIPLGARIVTIADAYDAMT
                     SVRPYRAAMAREAALGIIENQSGGLVDPYVLQRFHRMLAQEPELA"
BASE COUNT          708 a         1586 c         1436 g          654 t
ORIGIN      
        1 gctggccggc agcctcatgc accgttgggg tatcggaatg ccggccagcg gccgggacta
       61 cccgacgggg tttgatcggg cttctgctaa aatccggggt ccatgtcgcg tacctcatac
      121 cccgccccgc cgctgccgcg cgccggccag ctccgcgcct ggtggcgcgc ccccgcatcg
      181 ccgaccgccc tggcctggta cctggcccag gccgcgcgtg cgcacgacgc cccgctgctg
      241 gtgatcgccc gtgacaacca cggtgccaac cagctcgaag ccgacctgca gaccctgctt
      301 ggcggcgacc cggcgctgcc ggtggtcgcc ttcccggact gggaaaccct gccctacgac
      361 cgcttcagcc cgcatccgga catcatctcg cagcgcctgg ccgccctgca ccgcctgcct
      421 gcgctgaagc gcggcctggt gatcgtgccg gtgcagaccc tgctgcagca gctggccccg
      481 cgcagctacg tgatcggcgg cagcttcgac ctgaaggtcg gccagcgcct ggacctggaa
      541 gccgagaagc gccgcctgga aagcgccggc taccgcaacg tgccgcaggt gatggacccg
      601 ggcgacttcg ccgtgcgcgg tggcctgctc gacgtgtacc cgatgggtgc cgacgagccg
      661 ctgcgggtgg agctgctgga cgaggacatc gactcgatcc gcgccttcga cccggaaagc
      721 cagcgctcgc tggacaaggt cgaggccgtg cacatgctgc ccggccgcga agtgccgatg
      781 gacgaggcca gcatcgcccg cgtgctggcc acgctgcgcg aacgcttcga tgtcgatacc
      841 cggcgcagcg cgctgtacca ggacctgaag tcggggctgg ccccggccgg cgtcgagtac
      901 tacctgccac tgttcttcga gcgcaccgcg accctgttcg attatctgcc cagcggcagc
      961 ctgccggtgg tctgtgccgg tgccggtgaa gccgccgaga cgttctgggc gcagaccggc
     1021 gagcgctacg aacagcgccg ccacgatgtg gagcgcccgt tgctgccgcc gtcggcgctg
     1081 tacctgtcgc cggaactgct gcgcgagcgc ctgaacgatg cgccgcgcat cgaagtgtgg
     1141 tcggccgacc acgcgcgcat cgccgatgcg cacgcgctgg gcgaccagcc gttgccgccg
     1201 ctgccggtgg ctgcacgcga agcaccggcc ggtgatgcac tgaagtcttt cctcggccac
     1261 tacccgggcc gggtgctgat cgccgccgat tcgcccggcc gccgtgaagc cctgctggaa
     1321 gtgctgcagg ccgccgagct gaagccaccg gtggtggccg acctgcccag cttcctcgcc
     1381 ggcgatgcgc gcttcgcgat cgcggtggcg ccactggaag acggcttcgc gctggacgat
     1441 ccgcgcatcg cggtgctgac cgagcgccag ctgttccccg agcgcgccgg cagcgcccgc
     1501 cgcacgcgtc gtgccggccg cgagccggag gcgatcatcc gcgacctcgg cgagctgacc
     1561 gaaggcgcac cgatcgtgca tgaggaccat ggcgtgggcc gctaccgtgg cctgatcgcg
     1621 atggacgtcg gcggcatgcc cggcgagttc ctcgaaatcg aatacgccaa gggcgaccgc
     1681 ctgtatgtgc cggtggccca gctgcacctg atcagtcgct attccggtgc atctgcggaa
     1741 accgcgccgc tgcattcgct cggcggcgag cagtggagca aggccaagcg caaggccgcc
     1801 gagaaggtgc gcgacgtggc cgccgaactg ctggagatcc aggcccgccg ccaggcgcgt
     1861 gccggcctgg cactgcaggt ggaccgcgcg atgtacgaac cgttcgcggc cggtttcccg
     1921 ttcgaggaga ccccggacca gctggccgcg atcgacgcca ccctgcgcga cctggccagc
     1981 agccagccga tggaccgcgt ggtctgcggc gacgtcggct tcggcaagac cgaggtggcc
     2041 gtgcgcgccg ccttcgccgc cgccagcgct ggcaagcagg tggccgtgct ggtgccgacc
     2101 acgctgctgg ccgaacagca tttccgcaac ttccgcgacc gcttcgccga ctacccgatg
     2161 aaggtcgaag tgctgtcgcg cttcaagacc agcaaggaga tcaaggccga actggagaag
     2221 gtcgccgccg gcaccatcga cgtcatcgtc ggcacccatc gcctgctgca gccggacgtg
     2281 aagttcaagg acctgggcat ggtcatcgtc gacgaggaac agcgtttcgg cgtgcgccag
     2341 aaggaagcat tgaaggcgct gcgcgccaac gtgcacctgc tgaccctgac cgccacgccg
     2401 atcccgcgca ccttgaacat ggccatggcc ggcctgcgtg acctctcgat catcgccacc
     2461 ccgccgccga accggctggc ggtgcagacc ttcatcacgc agtgggacaa cgcgctgctg
     2521 cgcgaagcct tccagcgcga gctggcgcgt ggcggccagc tgtacttcct gcacaacgac
     2581 gtggagagca tcggccgcat gcagcgcgag ctgtccgagc tggtgcccga ggcgcgcatc
     2641 ggcatcgccc acggccagat gcccgagcgc gagctggaaa aggtgatgct ggatttccag
     2701 aagcagcgct tcaacgtgct gctgtcgacc acgatcatcg aatcgggcat cgacatcccc
     2761 aacgccaaca ccatcatcat caaccgcgcc gaccgcttcg gcctggccca gctgcatcag
     2821 ctgcgcggcc gtgtcggccg ttcgcaccat cgcgcctacg cctacctggt ggcccccgac
     2881 cgtcgttcga tcaccccgga tgcggaaaag cgcctggaag cgatcgcctc gatggacgaa
     2941 ctcggcgccg gcttcaccct ggccacgcac gatctggaga tccgcggtgc cggcgaactg
     3001 ctgggcgagg accagagcgg acagatggcc gaggtcggct tcagcctgta caccgaactg
     3061 ctggaacgcg cggtacgcag catcaagcag ggcaagctgc ccgacctgga tgccggcgag
     3121 gaagtgcgcg gcgccgaagt cgagctgcat gtgccggcgc tgattccgga agactacctg
     3181 ccggacgtgc acacccgcct gaccctgtac aagcgcatct ccagcgcacg cgacagcgat
     3241 gcactgcgcg agctgcaggt ggagatgatc gaccgcttcg gcctgctgcc ggatgcggcc
     3301 aagcacctgt tcgccatcgc cgagctgaag ctgaaggcca acacgctcgg catccgcaag
     3361 ctggacctgg gcgagaacgg tggccgcatc gtgttcgagt ccaagccgaa catcgacccg
     3421 atggcggtga tccagctgat ccagaagcaa ccgaacctct acgccatgga agggcccgac
     3481 aagctgcgca tcaagcatcc gctgccgttg ccggaagacc gcttcaacgc ggcccgtgcc
     3541 ctcctgacca ccctcgcccc gggttgatcg cccccgaata ccccgcaccg gtccccaccc
     3601 ggtgcgggtg gatgcccatg tttcctgacg ccgtacccgc ccccgacctg ctgcacgcgc
     3661 aggcctgcct gatcgatgcc ctctcgatgt cgctgcagat gcgcgacgcc tacacccgcc
     3721 accattgcga ccgtgtcggc ctgctcgcgc agcgcctggc cgcgcactgc gacctcgaca
     3781 ccgaggcctg cgaacagatc ggcctggccg cccgctttca cgacatcggc aagatcggca
     3841 ttcccgacga cgtgctgctg gccccgcgcc ggcacaccga cgaagagcgc gcgatcatgc
     3901 gtgagcaccc ggtgcgcggc gagcacatct tcctggccac cgggcgcagc gatgccgcac
     3961 cggtcgcacg gctgatccgt gcccaccacg aagccttcga tggcagcggc tatcccgatg
     4021 gcctgcgcgg cgagagcatt ccgctgggcg cgcgtatcgt caccatcgcc gatgcctacg
     4081 atgcgatgac cagcgtgcgt ccctatcgtg ccgcgatggc gcgcgaggct gcgctgggca
     4141 tcatcgagaa ccagtcgggt ggcctggtcg atccttacgt gctgcagcgc ttccaccgca
     4201 tgctggcgca ggagccggag ctggcgtaac tgcctgccgc cgggtatcaa ctgacgcgcc
     4261 cgccgacgcg ccggtagagt cgactgttag tcgactgccc ttcgtccaga tcgcgaacat
     4321 tccgcgctgc acgcgatagt cgaccaacgg tcgactctac caagcgggtt tcgtcgggcc
     4381 ggtt
//
LOCUS       DAOKIP010000270         4351 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.273,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000270 DAOKIP010000000
VERSION     DAOKIP010000270.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 4351)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4351)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4351
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.273"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(9..317)
                     /locus_tag="QEL58_003689"
     CDS             complement(9..317)
                     /locus_tag="QEL58_003689"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004136660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative addiction module antidote protein"
                     /protein_id="HDS1678115.1"
                     /translation="MSKLKTIPFDPADYLEDDVAIATYLSEALAAGDAGHFQEALGTV
                     ARARGMSGVAEVSGLGRESLYKALRPGAHPRFDTVQRVLSALGVHLIVQADKQPAGTA
                     "
     gene            516..1547
                     /gene="dusA"
                     /locus_tag="QEL58_003690"
     CDS             516..1547
                     /gene="dusA"
                     /locus_tag="QEL58_003690"
                     /EC_number="1.3.1.-"
                     /EC_number="1.3.1.91"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine(20/20a) synthase DusA"
                     /protein_id="HDS1678116.1"
                     /translation="MPDSTINAPMTSATARYADSLRLSVAPMMDWTDRHCRVFHRVLA
                     PGARLYTEMVHANAVIHGDRERLLGFDRSEQPLALQLGGSDPALLAQAARIAAEWGYD
                     EVNLNCGCPSDRVQAGRFGACLMREPVLVAECVAAMVDAVDIPVTVKCRLGVDEDNDY
                     AVFAAFVDRQVAAGAAMVVVHARNAWLKGLSPKENREVPPLKYDWAYRLKQERPALPV
                     VLNGGLASLEAVQAQATHVDGVMLGRAAYHDPYLLHQLEALHTGAPLQARGDLLRALR
                     PYVEARLGEGLALKHITRHLLGLFHGQPGGRAFRQVLSEGAHRPGADWSLVEQALAVT
                     ERDADRDAA"
     gene            1761..2135
                     /locus_tag="QEL58_003691"
     CDS             1761..2135
                     /locus_tag="QEL58_003691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005407693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1678117.1"
                     /translation="MSSAPFHRRIALATCVLLAAAPLSSALAQQPPRGDQGRAEMMER
                     GERGNRGDERSLSDAVRRVQRTTGGHILGAERVPFDGRDINRVKYMDDRGRVRYMDDP
                     APSRSQPRTPRSDMSSLRGDNP"
     gene            2209..2892
                     /locus_tag="QEL58_003692"
     CDS             2209..2892
                     /locus_tag="QEL58_003692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017917079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDS1678118.1"
                     /translation="MRILLVEDEAPLRETLAARLKREGFAVDAAQDGEEGLYMGREVP
                     FDVGIIDLGLPKMSGMELIKALRDEGKKFPVLILTARSSWQDKVEGLKQGADDYLVKP
                     FHVEELLARVNALLRRAAGWSKPTLECGPVALDLAAQTVSVAGSNVDLTSYEYKVLEY
                     LMMHAGELVSKADLTEHIYQQDFDRDSNVLEVFIGRLRKKLDPDGELKPIETVRGRGY
                     RFAIPRNEG"
     gene            2918..4345
                     /locus_tag="QEL58_003693"
     CDS             2918..4345
                     /locus_tag="QEL58_003693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014035644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HDS1678119.1"
                     /translation="MSGRLWFFRRWRPRSLQARQMFAASVGLVAFLALAGYALDAAFA
                     DTAKANLRERLKNYATAYAAGIDFTRDRSLYIREQPPDSRFDVPGSGLYLQVVMPHGK
                     GNSMSAEGPMLPTVGGGLLAPRQEVFEGPLPMIQIDGSQGSVYRYGLGLVWDADADPA
                     TEFPYTIYVMEDSRALGAQLRVFRSRVWFYLGGIGLILLLLQTVILQWSLRPLRRVIT
                     ELTKVQRGETARMSERHPRELEPLTDSINAFIESERENLERQRNTLADLAHSLKTPIA
                     VLRTQMDSGAGDGALREELDVQLQRMNNLVSYQLARAASSGYKLFSAPLPIESNAEEI
                     VRGLEKVYASKGVLCEFDIDPAARFHGEPGDLQELLGNLLENAFKWANRRVLLTAQPL
                     PAPNNARRAGLLLAVDDDGPGIAPDDIGKVLQRGVRGDERVQGHGIGLSIVQDLIKDY
                     RGELAVGRSSELGGARFEVRLPPGP"
BASE COUNT          725 a         1465 c         1456 g          705 t
ORIGIN      
        1 ggcagcgatc aggcggtgcc tgcgggttgc ttgtcggctt gcacgatgag atgcaccccg
       61 agcgctgaca gtacccgctg cacggtgtcg aagcgtgggt gtgcaccggg gcgcagcgcc
      121 ttgtacaggc tttcgcgtcc aaggccggag acctcggcaa caccgctcat gccacgagcg
      181 cgcgccactg ttccgagtgc ctcctggaag tggcccgcat cacctgctgc caaggcctcg
      241 ctcagatagg tggcgattgc gacgtcatct tccagatagt ctgcgggatc gaagggaatc
      301 gtcttcagct tgctcatggg gagagtcctg ggaatggcgc ctcgtgcgta acgcacagcc
      361 agcgcgcgaa cgtctctctt gcctggagga tcgccatgaa tcgtatccac agggatacat
      421 cgttcaattg gcaactgcgt caaagcctgg cgtgtctgcg tagcgctccc cgccgccatt
      481 cagccacccg gtgtaaacta ttgatctcac tggcaatgcc agactccacg atcaacgccc
      541 cgatgacgtc cgccaccgcc cgttacgccg attccctgcg cctgtccgtt gccccgatga
      601 tggactggac cgatcgccat tgccgcgtgt tccatcgcgt gctggccccg ggcgcacgcc
      661 tgtacacgga gatggtgcac gccaacgcgg tcatccacgg cgaccgcgag cgcctgctcg
      721 gcttcgaccg cagcgaacag ccgctggcgc tgcagctggg cggcagtgac ccggcgctgc
      781 tggcgcaggc cgcgcgcatc gccgccgagt ggggctacga cgaggtcaac ctcaactgcg
      841 gctgcccgtc cgaccgcgtg caggccgggc gcttcggcgc ctgcctgatg cgcgagccgg
      901 tactggtggc cgagtgcgtg gcggcgatgg tcgatgcggt ggatatcccg gtcacggtga
      961 agtgccgcct cggcgtggac gaagacaacg attacgcggt gttcgccgcg ttcgtcgacc
     1021 gccaggtcgc cgccggtgcg gcgatggtgg tggtgcacgc ccgcaacgca tggctgaaag
     1081 gcctgtcgcc gaaggagaac cgcgaggttc cgccgctgaa gtacgactgg gcctaccgct
     1141 tgaagcagga gcgcccggcg ctgccggtgg tgctcaacgg cggcctggcc agcctcgagg
     1201 cggtgcaggc gcaggccacg cacgtcgatg gcgtgatgct gggccgcgcg gcctaccacg
     1261 acccctatct gctgcatcag ctggaggcgc tgcacaccgg cgccccgctg caggcccgtg
     1321 gcgacctgct gcgcgcgctg cgcccctatg tggaagcgcg cctgggcgaa ggcctggcgt
     1381 tgaagcacat cacccgccac ctgctcggcc tgttccatgg ccagcccggt ggccgcgcat
     1441 tccgccaggt gctgagcgag ggcgcacacc gcccgggcgc cgactggagc ttggtcgagc
     1501 aggcgctggc ggtcaccgaa cgcgatgcgg atcgcgacgc agcgtgaccg aagtcacatt
     1561 cctgacttga caagggacgg cgattcgtcc cgaatgttca cttagctgaa caacgcagcg
     1621 gtgggaccgg aaaagttcag accggattca ctgccccaaa ccaagaattt gcaaaggatt
     1681 tgtaaagcgc cgggtcccga acccggcacc cggatttacg acttttgaac gaatcgccga
     1741 gctcggctag gatcgcatcg atgtcttccg ctcccttcca ccgccgcatt gccctggcca
     1801 cctgcgtgct gctggcggct gcgccgttgt cttcggcgct ggcgcaacag ccgccgcgcg
     1861 gcgaccaggg gcgggcggag atgatggagc ggggcgagcg cggcaaccgt ggcgacgagc
     1921 gttcgctgtc cgatgccgtg cgccgcgtgc agcgcaccac cggcggccac atcctcggtg
     1981 ccgagcgcgt gccgttcgat ggtcgtgaca tcaaccgggt gaaatacatg gacgaccggg
     2041 gccgggtccg ctacatggac gaccccgccc cgtcgcgttc acagccgcgc acgccgcggt
     2101 cggatatgtc atcactacgc ggcgataacc cctgaacagg gatagttgtc gctatcaacc
     2161 cgtaccccac aggcctccgg gccacaccca ggacactagg gagagttcat gcgtatcctt
     2221 ctggtcgaag acgaagcccc gctgcgtgag accctggcag cccggctcaa gcgcgaaggc
     2281 tttgccgtcg atgctgcgca ggacggcgag gaaggcctct acatggggcg cgaagtcccg
     2341 ttcgatgtcg gcatcatcga cctcggcctg cccaagatgt cgggcatgga gctgatcaag
     2401 gccctgcgtg acgaaggcaa gaagttcccg gtgctgatcc tgaccgcgcg ttcgagctgg
     2461 caggacaagg tcgagggcct gaagcagggc gccgacgatt acctggtcaa gccgttccac
     2521 gtcgaagagc tgctggcccg cgtcaacgcg ctgctgcgcc gcgccgccgg ctggagcaag
     2581 ccgaccctgg aatgcggccc ggtcgccctg gatctggctg cccagaccgt cagcgtcgcc
     2641 ggcagcaatg tcgacctgac cagctacgag tacaaggtgc tggagtacct gatgatgcat
     2701 gccggtgaac tggtctccaa ggctgacctc accgagcaca tctaccagca ggacttcgac
     2761 cgcgactcga acgtgctgga ggtcttcatc ggccgcctgc gcaagaagct ggacccggac
     2821 ggcgaactga agccgatcga gaccgtgcgt ggtcgcggct accgtttcgc gatcccgcgc
     2881 aacgagggct gagccggctc accctggcga taacacgatg tccggccgtc tgtggttctt
     2941 ccgacgctgg cggccgcgct cactgcaggc gcgccagatg ttcgccgcgt ccgtgggcct
     3001 ggtcgcgttc ctggcgctgg ctggttacgc gctcgacgcc gccttcgccg acacggcgaa
     3061 ggcgaacctg cgtgagcgcc tgaagaacta cgccaccgcc tacgcggccg gcatcgactt
     3121 cacccgcgat cgctcgctgt acatccgcga gcagccgccg gattcgcgct tcgacgttcc
     3181 aggcagcggc ctgtacctgc aggtggtgat gccgcacggc aagggcaatt cgatgtccgc
     3241 cgaaggcccg atgctgccca ccgtcggcgg tggcctgctg gcgccgcgcc aggaagtgtt
     3301 cgaaggcccg ctgccgatga tccagatcga cggcagccag ggctcggtgt accgctatgg
     3361 cctgggcctg gtgtgggatg ccgacgctga ccccgccacc gaattcccgt acaccatcta
     3421 cgtgatggaa gactcgcgcg cgctgggcgc gcagctgcgc gtgttccgca gccgggtctg
     3481 gttctacctc ggtggcatcg gcctgatcct gctgctgctg cagaccgtca tcctgcagtg
     3541 gagcctgcgc ccgctgcggc gggtcattac cgagctgacc aaggtgcagc gtggtgagac
     3601 cgcgcgcatg agcgagcgcc acccgcgcga gctggaaccg ctgaccgaca gcatcaatgc
     3661 cttcatcgag agtgagcgcg agaacctgga acgccagcgc aacaccctgg ccgacctggc
     3721 gcacagcctg aagacgccga tcgcggtgct gcgcacgcag atggacagcg gtgccggtga
     3781 tggcgcgctg cgcgaggaac tggacgtgca gctgcagcgc atgaacaacc tggtctcgta
     3841 ccagctggca cgcgcggcgt cgtcgggcta caagctgttc tccgccccgc tgccgatcga
     3901 atccaacgcc gaggaaatcg tgcgcggcct ggagaaggtc tacgcctcca agggcgtgct
     3961 gtgcgaattc gacatcgacc cggccgcgcg cttccacggt gagccgggcg acctgcagga
     4021 gctgctcggc aacctgctgg aaaacgcctt caagtgggcc aaccgccgcg tgctgctgac
     4081 cgcgcagccg ctgccggcgc cgaacaatgc gcgtcgcgcc ggcctgctgc tggcggtgga
     4141 cgacgatggc ccgggcatcg ccccggatga catcggcaag gtgctgcagc gtggcgtgcg
     4201 cggcgacgag cgcgtgcagg gccatggcat cggcctgtcg atcgtgcagg acctgatcaa
     4261 ggattaccgc ggcgaactgg ccgtcggccg ttccagtgaa cttggcggcg cccgcttcga
     4321 agtgcgcctg ccgccggggc cgtaaacccc t
//
LOCUS       DAOKIP010000271         4305 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.274,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000271 DAOKIP010000000
VERSION     DAOKIP010000271.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 4305)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4305)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4305
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.274"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..2304)
                     /locus_tag="QEL58_003694"
     CDS             complement(<1..2304)
                     /locus_tag="QEL58_003694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019304704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1678120.1"
                     /translation="MDIWNWVEKLQGDLRQAGQAQNAHLLNRLADEVSELRVDRVDAL
                     LPEARALGKALDNPWVDVYVGHWALRNRVGNRVEGESALGEAVALFERAHREDTLECP
                     QSICVTQDLAACYGNIDGPGWVPERIEVCDETLARINPGWACFQCLSCEKADALLDDG
                     RGQDALDYLQVQSDAIEACGKEVFDSFPEMQIKILLGMGRAEEALVLIEKREAEVAAS
                     GEYEPANCTVPRRLSKAWALAQLGRDEEALQQLVPWSELTPTYWRLWANTAAALCQRD
                     PARNSWDLGTRYSTIIEHFAQVGSHRLLIEVAALSLELALQRGARWVAQRQLALARTH
                     LAQLRQDRGAAALVAGLAARIEALPEVAPLPVPAGDLLAWLSEQGEQNQSRDPEREAQ
                     WLLQAQAQLPDDEALAETAASALAACGAQAEARALLWQFVQAHAQEDGPAAYTLMRWL
                     TEQGDDDGLRRLADVYRGSVPVFAHWCEVQRARRVSDWPALEQAAQALLAASPGSHGA
                     RGTLARMYMETGRFSEAQACYAQLVELLEEPNAAHWDHMSAASAARDWDAVRRSAAAI
                     GMELSSQDGVVEEPWGWVIIRSEEHGEPMEYYARRSGPVTARIVENAPANRAQQVGDW
                     VVFDAALVHPAPEEEEAREHFIPTYAQVHVLERGGFARSWLIDGAHPGEAAWNAFVEA
                     AEAQGWQVWSHSRPDYTVTDPDADEGTLPGVLFTVAQPQDHAPLALHRFLQQQTATWP
                     HPHCWLRLAEACDQDRQPHLDVIERYGL"
     gene            complement(2353..4209)
                     /locus_tag="QEL58_003695"
     CDS             complement(2353..4209)
                     /locus_tag="QEL58_003695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008267744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HDS1678121.1"
                     /translation="MQDTALTAPNAEIRRAGVDLNGLMTVLGKHLYSTPMVALRELVQ
                     NAHDSIIRRRIEQPGVDVPSRIAVQVDAGAGVLRITDTGAGLTRQEIHDYLATVGVGY
                     TRGLRQGGEDDDGLIGMFGLGFLSAFVLARRVSVRTTSYQTPELGHLYVSSNAEQYTV
                     SEVPARAVGTEVELELHPDFLPLANEARLHEVLGRYCALLSEPIFIGAAAEALNPEPP
                     PWRGQHDIALHPVQARRQALQFAARFEHDFEPIVTVPLRADGHSDATGLLWVQDGATY
                     GTSDNRNLSVFVRGMLLDDDARDLLPPWAGFIGGVIESSRLTPTASREDLQRDDQYRA
                     VQHALLEALIDGLADVARQQPEAWRRVLSRHNEALLGAALCDDRLFDLLLEHVRVPTS
                     QGDLPASALPARGAVHVILDNGGGFEEMLFRAMGVPVAHGHRYAVVPFLRRWAQAKGL
                     RLVELGTEQGNRALFRSDDSLDEAQLAWLREQLGDGEQLLPARFSPEALPVVVVPDRE
                     AELKQRLEDDENDKRVSMAALRLARQFTARIESRAPSRLYLNLDNPAVQALLRAQREG
                     HPQAEAAARLLRSLKIIVAAQGRPLARATAAPGPDLNGAFSDIAGALQQMLR"
BASE COUNT          652 a         1548 c         1446 g          659 t
ORIGIN      
        1 caacccgtag cgctcgatca cgtccaggtg cggctggcgg tcctggtcac aggcttcagc
       61 caggcgcagc cagcagtgcg gatgcggcca cgtcgcggtc tgctgttgca ggaagcgatg
      121 cagcgccagc ggcgcatggt cctgcggctg ggccacggtg aacagcacgc ccggcagggt
      181 gccctcgtcc gcgtccggat cggtcacggt gtagtcgggg cggctgtgcg accagacctg
      241 ccaaccctgt gcttcggcgg cttcaacaaa ggcgttccag gccgcttcgc ccgggtgcgc
      301 gccatcgatc agccagctgc gggcaaagcc gccgcgctcc agcacatgca cctgtgcgta
      361 ggtcgggatg aaatgctcgc gcgcttcctc ctcttccggt gccggatgca ccagagcggc
      421 atcgaacacc acccagtcgc cgacctgctg ggcgcggttg gccggtgcgt tttcgacgat
      481 gcgcgcggtg accgggccgc tgcggcgtgc gtagtactcc atcggctcgc catgctcttc
      541 gctgcggatg atcacccagc cccagggctc ctcgaccacg ccgtcctggc tggacagctc
      601 catgccgatc gctgccgccg agcggcgcac tgcgtcccag tcgcgcgccg cactggccgc
      661 gctcatgtgg tcccaatgcg cggcgttggg ttcttccagc agctccacca gctgcgcata
      721 gcaggcctgt gcttcgctga agcggccggt ctccatgtac atccgcgcca gcgtaccgcg
      781 cgcaccgtgc gagcccggcg aggctgccag caacgcctgt gcggcctgct ccagcgccgg
      841 ccagtcggac acgcggcgtg cgcgttgcac ctcgcaccag tgcgcgaaca ccggcacgct
      901 gccgcgatag acgtcggcta ggcgacgcag gccgtcgtcg tcgccctgct cggtcagcca
      961 gcgcatcagg gtgtaggccg ccgggccgtc ttcctgcgcg tgcgcctgca cgaactgcca
     1021 cagcagcgca cgcgcctcgg cctgcgcacc gcaggcagcc agcgcggagg cggccgtctc
     1081 ggccagcgct tcgtcatcgg gcaattgcgc ctgcgcctgc agcagccatt gcgcctcgcg
     1141 ttcggggtca cgcgactggt tctgctcgcc ctgctcgctc agccacgcca gcaggtcgcc
     1201 cgcgggaacc ggcagcggtg ccacctccgg caacgcctcg atgcgcgcgg ccagcccagc
     1261 caccagcgcc gccgcaccgc ggtcctggcg caactgcgcc agatgggtgc gggccagtgc
     1321 cagctggcgc tgcgcgaccc agcgcgcacc gcgctgcagg gccagctcca ggctcagcgc
     1381 agccacttcg atcagcaggc ggtgcgaacc cacctgggcg aagtgctcga tgatggtgga
     1441 gtaacgcgtg cccagatccc agctgttgcg tgccggatcg cgctggcaca gcgcggcggc
     1501 ggtgttcgcc cacagccgcc agtaggtggg ggtcagttca ctccagggca ccagctgctg
     1561 cagcgcctct tcatcgcgtc ccagctgggc cagcgcccag gccttggaca ggcggcgcgg
     1621 caccgtgcag ttggccggct cgtactcacc ggacgcggcc acttcggcct cgcgcttctc
     1681 gatcagcacc agcgcctcct cggcgcgccc catgcccagc aggatcttga tctgcatctc
     1741 cgggaagctg tcgaacactt ccttgccaca ggcctcgatc gcatcggact gcacctgcag
     1801 gtagtcgagc gcatcctggc cgcgaccatc gtcgagcagc gcgtcggcct tctcgcagct
     1861 caggcactgg aagcaggccc agccgggatt gatgcgcgcc agcgtttcat cgcacacctc
     1921 gatgcgctcg ggcacccagc cggggccatc gatgttgccg tagcaggcgg ccaggtcctg
     1981 ggtcacgcag atcgactgcg ggcactccag cgtgtcctcg cggtgcgccc gctcgaacag
     2041 cgccaccgct tcgcccagcg cgctctcgcc ctcgacacga ttgccgacac ggttgcgcag
     2101 cgcccaatgg ccgacgtaga cgtcgaccca cgggttgtcc agcgccttgc ccagcgcgcg
     2161 cgcctcgggc agcagcgcgt cgacgcggtc gacacgcagt tcactcacct cgtcggcgag
     2221 gcggttcagc aggtgcgcgt tctgcgcctg gccggcctgg cgcaggtcgc cctgcagttt
     2281 ttcgacccag ttccagatgt ccatgggata agtgctcctg tctagcgaag gctggatgag
     2341 agggggcggt gctcagcgca gcatctgctg cagggcaccg gcaatatcgg agaaggcgcc
     2401 gttgagatcc gggcctggcg cggcggtcgc gcgggccagc ggacggccct gcgcggcaac
     2461 gatgatcttc agcgagcgca gcaggcgcgc ggcggcttcg gcctgcggat ggccctcgcg
     2521 ctgcgcgcgc agcagcgcct gcaccgccgg attgtcgaga ttgagataca gccgcgacgg
     2581 cgcgcgcgat tcgatgcgcg cggtgaactg ccgcgccaag cgcagcgccg ccatcgacac
     2641 acgcttgtcg ttctcgtcgt cttccaggcg ctgcttcagc tcggcctcgc ggtcgggcac
     2701 caccaccacc ggcagcgcct ccgggctgaa gcgcgccggc agcagctgct caccgtcacc
     2761 cagctgctca cgcaaccatg ccaactgtgc ttcgtcgagg ctgtcgtcgc tgcggaacaa
     2821 cgcgcgattg ccctgctcgg tgccgagttc gaccaggcgc aggcccttgg cctgggccca
     2881 gcgccgcagg aacggcacca ccgcatagcg atggccatgc gcgaccggca cgcccatcgc
     2941 gcggaacagc atttcctcga agccgccgcc gttgtcgagg atcacgtgca cggcaccgcg
     3001 cgccggcaat gcactggccg gcaggtcgcc ctgtgaggtc ggcacgcgca cgtgttccag
     3061 cagcaggtcg aacaggcggt cgtcgcacag cgccgcgccc agcagcgcct cgttgtggcg
     3121 gctcagtaca cgccgccacg cttccggctg ctgtcgcgca acgtcggcca ggccgtcgat
     3181 caatgcctcc agcaacgcat gctgcacggc acggtactgg tcatcgcgct gcaggtcttc
     3241 gcggctggcg gtgggcgtca gccgcgagga ttcgatcacc ccaccgatga aaccggccca
     3301 cggcggcagc aggtcgcgcg catcatcgtc cagcagcatg ccgcgcacga acaccgacag
     3361 gttgcggttg tcgctggtgc cataggtggc gccgtcctgc acccacagca ggccggtggc
     3421 atcactgtgg ccatcggcac gcagcggcac ggtgacgatc ggttcgaaat cgtgctcgaa
     3481 gcgagcggcg aactgcagcg cctgccggcg cgcctgcacc ggatgcagcg cgatatcatg
     3541 ctggccgcgc cacggcggcg gctcagggtt gagcgcctcg gctgcggcgc cgatgaagat
     3601 cggctcggac agcagcgcgc agtagcggcc cagcacctcg tgcaggcgcg cctcgttggc
     3661 cagcggcagg aaatctggat gcagctccag ctccacctcg gtgccgaccg cacgtgccgg
     3721 cacttcgctg acggtgtact gctcggcatt gctggacacg tacagatggc ccagctcggg
     3781 cgtctggtag gaagtggtgc gcacgctgac ccggcgcgcc agcacgaacg ccgacaggaa
     3841 gcccaggccg aacatgccga tcaggccatc gtcgtcctcg ccgccctggc gcaggccacg
     3901 ggtgtaacca acgccgacgg tggcgaggta gtcatggatt tcctggcggg tcaggccggc
     3961 gccggtatcg gtgatgcgca gcacgccggc accggcatcg acctgcaccg cgatgcgcga
     4021 gggcacatcg acgccaggct gctcgatgcg ccggcggatg atcgagtcgt gcgcgttctg
     4081 caccagttcg cgcagcgcca ccatcggggt ggaatacagg tgcttgccca gcaccgtcat
     4141 cagtccattg agatcgaccc cggcgcgacg gatttcggcg ttgggggcgg tgagcgcggt
     4201 gtcctgcatg taatcgttta ctcctgggca cggaaagacg ccagaggacg ccttcgtcga
     4261 gcgggaaaaa ctagcacagc aagcctgacc ggtaccgtgt cggcc
//
LOCUS       DAOKIP010000272         4301 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.275,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000272 DAOKIP010000000
VERSION     DAOKIP010000272.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 4301)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4301)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4301
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.275"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(56..967)
                     /locus_tag="QEL58_003696"
     CDS             complement(56..967)
                     /locus_tag="QEL58_003696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HDS1678122.1"
                     /translation="MRTAALLLPLALAASFTSAPLLAAPATPSHATAAKSQLRLQTFH
                     PGPQAMFSVSSVLIEGRHDAMLVDAQFGASDARRLVDLIRASGKQLTTIYISHGDPDY
                     YFGLATLRDAFPQARIVATAQTVAHIQQTQAGKLTYWGPKMGADVPARIVVPQVLEED
                     ALQLEGQRLPLIGLDGPTPDRSVLWIPSLRAIVGGIPVVAGEHVWMADTQTPQSHADW
                     LQTLQRLQALKPKVVVPGHYAPGAALDASALRFTADYIRAFDAETAKARDSAALVKAM
                     QARYPKLAGVESLQLSAKVAKGEIQWP"
     gene            complement(1071..1709)
                     /locus_tag="QEL58_003697"
     CDS             complement(1071..1709)
                     /locus_tag="QEL58_003697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005407933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-binding protein"
                     /protein_id="HDS1678123.1"
                     /translation="MKIALVGSTGNIGRQIARHALAHGHELTVIVRSAQDLPAELAGA
                     HPVIASLDDPDALVAAITGHDVLASAYGPRPGDDIGRVGEVAAQLAAAARKAGVPRLV
                     VVGGAGSLEVAPGVQLVDTPNFPEAYKPYALAHREAFKRLQAVEELDWTFFSPAAEIG
                     PGEERGQYRVQPKAFLADASGHSRISYADYGAAFVAELEAHKYPKQIITAAY"
     gene            1818..2747
                     /locus_tag="QEL58_003698"
     CDS             1818..2747
                     /locus_tag="QEL58_003698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005415135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDS1678124.1"
                     /translation="MDRLTAMTVFVEVAERGSLTAAAEVLDMSRAMVSRYLAEVEGWL
                     GARLLHRTTRRVSLTGPGEAALARFRQMLEIGEALQGELASDDPEPHGTLRVTASVSF
                     GQSHLARAVAGFVARHPAARIELLLVDRTVNLVEERVDLAVRIARQIDPSLIARRLAT
                     CRSVLCATPSYLQAHGTPTAPEHLAAHNCLTHHYVGKSLWQLHRDGRSLSVAVGGNIS
                     ANEASLLLEAVRAGAGIAMLPTYQVAPLLRTGELIELLPEFSLDELGIHAVYASRRQQ
                     PAIMRRFLDFLGECFASPAFQDLDWRPPGKENT"
     gene            2744..3535
                     /locus_tag="QEL58_003699"
     CDS             2744..3535
                     /locus_tag="QEL58_003699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012479036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HDS1678125.1"
                     /translation="MNHGQALIDHNRAAWDRQASEVREWSRPVESSTIAAAREGRWQV
                     HLTPRALPLDWLGDVRGRRILCLASGGGQQAPVLAAAGAEVTVFDLSDGQLEQDRQVA
                     ARDGLHLRTVQGDMRDLHAFANGSFDVVFQPISNLYVPDVRPVWTECHRVLARDGLLM
                     ASFYNPVLFVGARDPQLDTQGLIRPQYAIPYSDLEDLAPAEREAKLARGDALTFGHSL
                     TELIGGQLDAGFVIDRFMEDWQPQPRFLIDRYLPTFLATRARRIG"
     gene            3601..4257
                     /gene="gph"
                     /locus_tag="QEL58_003700"
     CDS             3601..4257
                     /gene="gph"
                     /locus_tag="QEL58_003700"
                     /EC_number="3.1.3.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008267059.1"
                     /note="PGP is an essential enzyme in the glycolate salvage
                     pathway in higher organisms (photorespiration in plants).
                     Phosphoglycolate results from the oxidase activity of
                     RubisCO in the Calvin cycle when concentrations of carbon
                     dioxide are low relative to oxygen. This enzyme is a
                     member of the Haloacid Dehalogenase (HAD) superfamily of
                     aspartate-nucleophile hydrolase enzymes (PF00702); Derived
                     by automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycolate phosphatase"
                     /protein_id="HDS1678126.1"
                     /translation="MSYPYPLVVFDLDGTLVDSAADIAEALNRTLEDIGVARVPETTV
                     LGWIGDGVRRLVEQAVHAAGREVDLAAVMPVFMVHYRECLLRSPRLFDGVAEALAQLR
                     ARNVPLAICTNKPEALVPPLLQHLGIGDAFALVLGGDSLPQRKPSGEPLRHIAAHFGL
                     PVDACLMVGDSLTDYRAAEEAGMPIALVRYGYPRGLDLATAHAVAVIDDLRELPGLQR
                     "
BASE COUNT          633 a         1419 c         1538 g          711 t
ORIGIN      
        1 ttgacgttgc ttcggcgggt gcagggcgca gccctgcaaa agaacccccc ctacctcatg
       61 gccactgtat ctcgcccttg gccaccttcg cactcagctg cagcgactcg acgccggcca
      121 gcttcgggta gcgcgcctgc atcgccttca ccagcgccgc actgtccctg gcctttgccg
      181 tctcggcatc gaaggcgcgg atgtaatctg cggtgaagcg cagtgcactg gcatccagcg
      241 ccgcaccggg ggcgtagtgt cctggcacca ccactttcgg cttcagtgcc tgcaggcgct
      301 gcagggtctg cagccagtcg gcgtgtgatt gcggcgtctg cgtatcggcc atccacacgt
      361 gctcgcccgc caccaccgga atgccgccga cgatcgcgcg cagcgacggt atccacagca
      421 cgctgcggtc cggggtcggg ccatccaggc cgatcagcgg caggcgctgg ccttccagct
      481 gcagcgcgtc ttcctccagc acctgcggca ccacgatgcg cgcgggtaca tcggccccca
      541 tcttcggtcc ccagtaggtc agcttgccgg cctgggtctg ctggatgtgg gcgacggtct
      601 gcgcggtggc gacgatgcgc gcctgcggga acgcatcccg cagcgtggcc aggccgaagt
      661 agtagtccgg atcgccgtgg ctgatgtaga tcgtggtcag ttgcttgccg ctggcgcgga
      721 tcaggtccac cagcctgcgc gcgtcgctgg cgccgaactg cgcatcaacc agcattgcgt
      781 catggcggcc ttcgatcagc accgaggaca ccgagaacat ggcctgcggg ccggggtgga
      841 atgtctgcag gcgcagctgg gacttggccg ccgtggcgtg cgacggggta gccggtgcgg
      901 ccagcagcgg ggcactggtg aaactggcgg ccagggcgag ggggagcagc agggcagcgg
      961 tacgcatggg gatgtccttg tggggatatc gtgccgagca tcggctcggc gctacaggtg
     1021 ggtagcggca ggccatgccc ggcgaacggg caggcctgcg cacgccatga tcaatacgcc
     1081 gcagtgatga tctgcttcgg gtacttatgt gcttccagct cggcgacgaa ggctgcgcca
     1141 tagtcggcgt agctgatgcg gctgtggccg ctggcatcgg cgaggaacgc cttgggctgc
     1201 acgcggtact ggcctcgctc ttcacccggg ccgatttcgg cggccggcga gaagaaggtc
     1261 cagtccagct cctccactgc ctgcaggcgc ttgaaggctt cgcggtgggc cagcgcgtac
     1321 ggcttgtagg cctcggggaa gtttggggta tccaccagct gcacgccggg ggcgacttcc
     1381 aggctgccgg caccgccgac cactaccagg cgtggcacgc cggccttgcg cgcagcggcg
     1441 gccagctgtg cggcgacctc gccgacgcgg ccgatgtcat cgcccggccg cgggccgtag
     1501 gcgctggcca gcacgtcgtg gccggtgatg gcggcaacca gcgcatccgg gtcgtccagc
     1561 gaagcgatca ccggatgcgc gccggccagc tcggccggaa gatcctgcgc gctgcgcacg
     1621 atgacggtga gttcgtggcc gtgggccagc gcgtggcggg cgatctggcg gccgatgttg
     1681 ccggtggaac caacgagggc gatcttcatg gcaggactcc gtggggcggt gtggggtggg
     1741 aatggggcca ctctaggccg ctgcagtcgc tcgaaaaaca gcgtataacg cgcttgtttg
     1801 ttgcatggat cgagcatatg gaccgattga ccgccatgac tgtgttcgtc gaggtggccg
     1861 agcgcggcag cctgaccgcg gccgccgagg tgctggacat gtcgcgggcg atggtcagcc
     1921 gttacctggc cgaggtcgaa ggctggctgg gggcgcgcct gctgcatcgg accacgcgca
     1981 gggtcagcct gaccggtccc ggcgaggcgg cgctggcgcg cttccggcag atgctggaga
     2041 tcggcgaggc gctgcagggc gagctggcca gcgatgatcc cgagccgcac ggcacgctgc
     2101 gggtgaccgc cagcgtgtcg ttcgggcaga gccatctggc gcgcgcggtg gccggtttcg
     2161 tcgcacgcca cccggcggcg cgcatcgagc tgctgctggt cgaccgcacg gtgaacctgg
     2221 tagaggagcg ggtggacctg gcggtgcgca tcgcgcgcca gatcgacccc agcctgatcg
     2281 cgcggcggct ggccacctgc cgctcggtgc tgtgcgcgac gccctcctac ctgcaggcgc
     2341 acggaacgcc gaccgccccc gagcacctgg ccgcgcacaa ctgcctgacc caccactacg
     2401 tcggcaagag cctgtggcag ctgcaccgcg acggacgttc gttgtcggtg gcggtgggcg
     2461 gcaacatcag cgccaacgag gcctcgctgc tgctggaggc ggtgcgtgcc ggtgccggca
     2521 tcgcgatgct gccgacctac caggtggcgc cgctgctgcg cactggcgag ctgatcgaac
     2581 tgctgccgga attcagcctg gacgaactcg gcattcatgc cgtgtacgca tcacggcgcc
     2641 agcagcccgc tatcatgcgg cgattcctgg acttcctggg cgagtgtttc gccagcccgg
     2701 ccttccagga cctggattgg cgcccgccgg gcaaggagaa cacatgaacc atggacaggc
     2761 cttgatcgac cacaaccgtg ctgcctggga ccgccaggcc agcgaggtgc gcgaatggtc
     2821 gcgcccggtt gaaagctcaa ccatcgccgc cgcgcgcgaa gggcgctggc aggtgcatct
     2881 gacgccgcgt gcactgccgc tggactggct gggcgatgtg cgcggccgcc gcatcctgtg
     2941 cctggcttcg ggtgggggac aacaggcgcc ggtgctggcc gcggccggtg ccgaggtcac
     3001 cgtgttcgac ctgtccgacg ggcagctgga gcaggaccgc caggtcgcgg cgcgcgatgg
     3061 cctgcacttg cgcacggtgc agggcgacat gcgcgacctg cacgcgttcg ccaacggcag
     3121 tttcgatgtg gtgttccagc cgatctcgaa tctctatgtg ccggatgtac gcccggtatg
     3181 gaccgaatgc catcgggtgc tggcgcgcga tggcttgctg atggccagct tctacaaccc
     3241 ggtgctgttc gttggtgcgc gcgatccgca gctggatacg cagggtttga tccggccgca
     3301 gtacgccatt ccctattcgg acctggaaga cctggcaccg gccgagcgcg aggccaagct
     3361 ggcgcgcggc gatgcgctca ccttcggcca cagcctgacc gaactcatcg gcggtcagct
     3421 cgacgccggc ttcgtcatcg atcgtttcat ggaagactgg cagccgcagc cgcgcttcct
     3481 gatcgaccgt tatctgccca cgttcctggc cacccgcgcg cgcaggatcg gctgaggcgg
     3541 gcctgcagaa aagcaggccg acgtacaatg gacggcccca cgtcgcacag gtgccgtccc
     3601 ttgtcgtatc cctatccgct ggtcgtgttc gacctcgatg gcacgctggt ggacagcgcg
     3661 gccgatatcg ccgaagcact gaaccgcacg ctggaagaca tcggtgtggc gcgcgtgccg
     3721 gaaaccacgg tgctgggctg gatcggcgac ggtgtgcgtc gcctggtgga gcaggccgtg
     3781 catgccgccg gccgcgaggt cgatctggcc gcggtgatgc cggtgttcat ggtgcactac
     3841 cgggaatgcc tgctgcgcag cccacgcctg ttcgatggcg tggccgaggc gctggcacag
     3901 ctgcgtgcgc gcaacgtgcc gctggcgatc tgcaccaaca agcccgaagc gctggtgccg
     3961 ccactgctgc agcacctggg catcggggac gcgttcgcgc tggtgctggg cggcgactcg
     4021 ctgccgcagc gcaagcccag tggtgaaccg ctgcgccaca tcgctgcgca ctttgggttg
     4081 ccggtagacg cctgcctgat ggtcggtgat tcgctgaccg actaccgcgc cgccgaagag
     4141 gccggcatgc cgatcgcgct ggtgcgctac ggctatccgc gtggcctgga tctggccacc
     4201 gcacatgcgg tggccgtgat cgacgacctg cgtgagttgc cggggttgca gcgctgatgc
     4261 aacggacatc cctggtcgcc ggccggtaac ccgggccgac g
//
LOCUS       DAOKIP010000273         4222 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.276,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000273 DAOKIP010000000
VERSION     DAOKIP010000273.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 4222)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4222)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4222
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.276"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(57..1388)
                     /gene="pepQ"
                     /locus_tag="QEL58_003701"
     CDS             complement(57..1388)
                     /gene="pepQ"
                     /locus_tag="QEL58_003701"
                     /EC_number="3.4.13.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Xaa-Pro dipeptidase"
                     /protein_id="HDS1678127.1"
                     /translation="MIQQDPGALYSDHLAVLCRRAEQALARGGFDHLVVPSGTLHYQV
                     FDDRDYPYAVNPQFKAWLPLTRVPNSWIVFTPGKRPAVIFHQPFDYWHVVPDAPSGWW
                     VEHFDIHIIRTPEEALALLPADPSRCAILGEPQSALGAFVPNNPAPVVNYLEWHRAYK
                     TPYEIALMRQAQVLGVRGHRAAEAAFRNGADEFSIHMAYCQAVGQDANELPYGNIVAL
                     NEHAAVLHYTELGRKAPQPLRSFLIDAGASAHGYASDITRTYAAHGHDEFAAMIAAVD
                     AAQQQMCAAVRGGFDYKQLHVDAHLSLMGVLKDFDVIKVSPQTAVETGVSAAFFPHGI
                     GHLIGLQVHDVAGFAASDEGGRVERPAGHPYLRLTRVLEPGMVVTIEPGLYFIDMLLN
                     EVKDAGHGDAINWDRVDFFRPYGGIRIEDEVLCTEGEADNLTRPEFAAANG"
     gene            complement(1463..1837)
                     /locus_tag="QEL58_003702"
     CDS             complement(1463..1837)
                     /locus_tag="QEL58_003702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010484030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HDS1678128.1"
                     /translation="MNTQPPQDTRRAPRRQVSDLVPVTDQMRDSVVGRLGNVSETGML
                     MLASVPLREDALYQLRFPLPMADGRQQAIDVGVHLLWSEPAHVPGQSWTGFRFLTLSR
                     EHRQLLRQWVGEDSDEGPVSTA"
     gene            complement(1834..4116)
                     /locus_tag="QEL58_003703"
     CDS             complement(1834..4116)
                     /locus_tag="QEL58_003703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1631 family protein"
                     /protein_id="HDS1678129.1"
                     /translation="MSAVFSPTPADKARLAAADLPPRVRELLGALIGLCRQTLAAPLI
                     LTVEALEQTLLHDADRARNPLQQAELMAQRGQLHAFAGHFPDRMLDAVAEALARLREP
                     ASVAPAGATPPPLPGMLGLSLVAEHDVDRDLLLTEMIRRETLRSTNTLNLLGQRLGVL
                     AAAPAFEADVLPLAPQALCAMVRRLAEQDTLGADVQLALYRSFERQVLERLGDVLDRA
                     NALLAQQGVLPGLVYTPYLARSSSTRRIITHSVGGGRATQPAKRAPAAPLTGWNGSAP
                     SGSWSNLVQEAVSDTGGRDTAVPGLTTSTGSALHDLLQQARHASTAPAPSAAVPSAAV
                     DAVLARLQAQSSAATGLADLQTAVVAQLRSEHGAQAQLGSHDRDNLDLLRLLMQQVQQ
                     QQRPDPVPAALLARLQVPLARAAMADPGFFVRDEHPARELLNQIAEAGAHWLGDDDVD
                     PQLLQRMAQSVQGLLGQDARTPEAFAAANEDVQQHQRAAAHRAELAERRHVEAARGKE
                     RLDLARRQASAQIDQCCDTQAPPRFVQTLLRQAWADALTLTRLRHGDDSPQWQERLQQ
                     TQRIAAVTAQAADAADGTDAALATEVEAALVQVGYHAEEAAAVARRLATPGGEDESTS
                     RTELSARLKARARLGEHAGTSSAGAPAEPRSSAEEAAYQQLSTLPFGSWFDIDTGDGT
                     LRRQRLSWYSLLTGHALMVNPRGQKIADTDLDTLARQLSAGRAQLVTEDKGRLVDRAW
                     QASLDALRALAVGHTRKTPA"
BASE COUNT          601 a         1417 c         1526 g          678 t
ORIGIN      
        1 acccaccccg cccggccaag cgcggctttt gccctaagca tccaaccacg aggggctcag
       61 ccgttggccg ctgcaaactc cggccgcgtc aggttgtccg cctcgccctc ggtgcacagc
      121 acttcgtcct cgatgcggat gccgccatac ggacggaaga agtccacgcg gtcccagttg
      181 atcgcatcgc catggccggc gtccttcact tcgttcaaca gcatgtcgat gaagtacagg
      241 cccggttcga tggtcaccac catgcccggc tccagcacgc gggtcaggcg caggtaggga
      301 tgccccgccg ggcgctcgac gcggccgcct tcgtcgctgg ccgcgaaacc ggccacgtcg
      361 tgcacctgca ggccgatcag gtggccgatg ccgtgcggga agaacgcggc gctgacgccg
      421 gtttccacgg cggtctgcgg cgacaccttg atgacgtcga agtccttcag tacgcccatc
      481 agcgagagat gcgcgtccac gtgcagctgc ttgtagtcga agccgccgcg caccgccgcg
      541 cacatctgct gctgggcggc atcgacggcg gcgatcatcg cggcgaactc gtcgtggccg
      601 tgcgcggcgt aggtgcgggt gatgtcgctg gcgtagccgt gcgcgctggc gccggcatcg
      661 atcaggaagc tgcgcagcgg ctgcggcgcc ttgcggccca gctcggtgta gtgcagcacg
      721 gcggcgtgtt cgttcagcgc gacgatgttg ccgtacggca gttcattggc atcctggccc
      781 acggcctggc aatacgccat gtggatgctg aactcgtcgg cgccattgcg gaacgcggcc
      841 tcggcggcgc gatggccacg cacgcccagc acctgcgcct ggcgcatcag cgcgatttca
      901 tacggcgtct tgtaggcgcg gtgccattcc aggtagttca ccaccggcgc tgggttgttc
      961 ggtacgaatg cacccagcgc gctctgcggc tcgccgagga tcgcgcagcg cgacgggtcg
     1021 gccggcagca gggccagcgc ttcttcgggc gtgcggatga tgtggatgtc gaagtgctcc
     1081 acccaccagc cgctcggtgc atccggcacc acgtgccagt aatcgaaggg ctggtggaag
     1141 atcaccgccg ggcgcttgcc gggcgtgaac acgatccagc tgttcggcac gcgggtgagc
     1201 ggcagccagg ccttgaactg cggattcacc gcgtacgggt agtcgcggtc gtcgaacacc
     1261 tggtagtgca gggtgccact gggcaccacc aggtgatcga agccgccgcg ggccagcgcc
     1321 tgctcggcac gtcggcacag cacggccagg tggtcggaat acagggcgcc ggggtcttgc
     1381 tggatcattg cggtggctcg acacgaaaac ggccctagat tctgccgcat accgcgaaaa
     1441 accgctgtgc cggaaccggc actcaggccg tcgaaaccgg tccctcgtcg ctgtcttcgc
     1501 ccacccactg gcgcagcagc tgccgatgtt cgcgtgacag ggtgaggaag cggaagccgg
     1561 tccagctctg tcccggcacg tgcgccggtt cgctccacaa caggtgcacg cccacgtcga
     1621 tggcttgctg gcggccatcg gccatcggca gcgggaatcg cagctggtac agcgcatcct
     1681 cgcgcaacgg cacgctggcc agcatcagca tgccggtttc agaaacgttg ccgaggcggc
     1741 ccactacgct gtcgcgcatc tggtcggtca ccggcaccag gtccgagacc tggcggcgcg
     1801 gtgcccgacg ggtgtcctgt ggcggctggg tgttcatgca ggggttttcc gggtgtggcc
     1861 tacggccagc gcacgcagcg catcgaggct ggcctgccag gcacgatcga ccaggcggcc
     1921 cttgtcttcg gtgaccagct gcgcgcggcc ggcgctgagc tggcgggcga gggtatccag
     1981 gtcggtatcg gcgatcttct gtccgcgtgg attgaccatc agcgcgtggc cggtcagcag
     2041 gctgtaccac gacaggcgct ggcggcgcag tgtgccatcg ccggtgtcga tgtcgaacca
     2101 gctgccgaac ggcagggtgg acagctgttg gtaggcggct tcttcggcac tgctgcgtgg
     2161 ctcggcgggc gcgcctgcgc tggacgtgcc ggcatgctcg cccagtcgcg cgcgtgcttt
     2221 caggcgtgcg ctgagttcgg tacgcgatgt gctttcgtcc tcgccgccgg gcgtggccag
     2281 gcgacgcgcg acggcggcgg cctcctcggc gtggtagcca acctgcacca gcgccgcttc
     2341 cacctcggtg gccagcgcag cgtcggtgcc atcggcagcg tccgcggcct gggcggtcac
     2401 cgccgcgatg cgctgggtct gctgcaggcg ctcctgccac tgcggtgaat cgtcaccatg
     2461 gcgcaggcgg gtcaatgtca gggcgtcggc ccacgcctgg cgcagcaggg tctgcacgaa
     2521 gcgcggcggc gcctgcgtat cgcagcactg gtcgatctgt gcgctggcct ggcgtcgtgc
     2581 caggtccagg cgttccttgc cgcgcgcggc ctcgacatgg cggcgctcgg ccagctcggc
     2641 gcgatgggcg gccgcgcgct ggtgctgctg cacgtcttca ttggcggcag cgaaggcctc
     2701 gggtgtgcgc gcatcctggc cgagcagccc ctgcacgctc tgcgccatgc gctggagtag
     2761 ttgggggtcg acgtcatcat cgccgagcca atgggcaccg gcttcggcga tctggttgag
     2821 cagttcgcgg gcggggtgct cgtcacgcac gaagaagccg gggtcggcca tggccgcgcg
     2881 cgccagcggc acctgcaggc gcgccagcag cgcggccggt accggatcgg gacgttgctg
     2941 ctgctgtacc tgctgcatca gcaggcgcag caggtcgaga ttgtcgcggt cgtggctgcc
     3001 cagctgggcc tgcgcgccgt gttcgctgcg cagctgggcg accactgcgg tctgcaggtc
     3061 ggcaaggccg gtggcggcgc tggactgggc ctgcaggcgc gcgagcaccg catccacggc
     3121 ggcgctgggt accgcagcgg acggcgcggg cgcggtactg gcgtgccggg cctgctgcag
     3181 caggtcgtgc agcgcactgc cggtggaggt ggtcagccca ggcacggcgg tgtcgcggcc
     3241 accggtgtcg ctgaccgcct cctgcaccag gttcgaccac gagcctgacg gtgccgatcc
     3301 gttccagccg gtcagcggcg ctgccggggc acgcttggcc ggctgcgtcg cgcggccacc
     3361 gcccacggag tgggtgatga tgcgtcgcgt gctcgacgaa cgcgccaggt aaggcgtgta
     3421 gaccaggccg ggcagaacgc cctgctgggc cagcagcgca ttggcgcggt cgagcacatc
     3481 gcccagccgt tccagtacct gacgctcgaa gctgcgatac agcgccagct gtacgtcggc
     3541 gccgagggtg tcctgctccg cgagccggcg caccatcgcg cacaatgcct gcggcgccag
     3601 cggcagcacg tcggcctcga atgccggcgc cgccgccagc acgcccagcc gttgcccgag
     3661 caggttcagc gtattggtcg agcgcagggt ttcgcgccgg atcatctcgg tcagcagcag
     3721 gtcgcggtcg acgtcatgct cggccaccag cgacagcccc agcatgccgg gcagcggggg
     3781 cggagtggcc ccggccgggg ctacactcgc aggctcgcgc aggcgcgcca gggcctctgc
     3841 aacggcatcc agcatccggt cggggaaatg accggcaaag gcatgcagtt ggccgcgctg
     3901 ggccatcagt tcggcctgct gcagtggatt gcgcgcgcga tcggcgtcgt gcagcagggt
     3961 ctgttccagc gcttcgacgg tcaggatcag cggcgcggcc agcgtctgcc ggcacaggcc
     4021 gatcaacgcg cccagcagtt cgcgcacccg cggcggcagg tcggccgcgg ccaggcgggc
     4081 cttgtcggca ggggtggggg aaaaaacagc tgacatcggc gagcggtacc cggattcccg
     4141 cggatcgatc tggtgaatct accgtgtcgg ccgatgtcgg cgctacttta gggtgaatgt
     4201 gaaatgcatc tgccgggcat gg
//
LOCUS       DAOKIP010000274         4208 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.277,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000274 DAOKIP010000000
VERSION     DAOKIP010000274.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 4208)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4208)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4208
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.277"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(10..516)
                     /gene="greB"
                     /locus_tag="QEL58_003704"
     CDS             complement(10..516)
                     /gene="greB"
                     /locus_tag="QEL58_003704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012511731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreB"
                     /protein_id="HDS1678130.1"
                     /translation="MSRWRPPAEKSTALITAAGHARLKAELDELWRVRRPEVVKALAA
                     AAAEGDRSENAEYTYRKKQLGEIDRRVRYLTKRLEALRVVDTTPTDPQAVFFGAWVEL
                     ENVDSGDTSRYRIVGPDETDAGLGWISIDSPLARALLKKRLDDEFSVELPGGQFTFVV
                     IGVEYAPL"
     gene            complement(596..2101)
                     /locus_tag="QEL58_003705"
     CDS             complement(596..2101)
                     /locus_tag="QEL58_003705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011347958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF853 family protein"
                     /protein_id="HDS1678131.1"
                     /translation="MDPILLGKGITDDIAVTLLPKLGNRHGLVAGATGTGKTVTLMTL
                     AEGFSRLGVPVFLADVKGDVSGLAVPGTGADNLLQRAAEIGVANYAPAASPTIFWDLY
                     GKLGHPVRTTVSEMGPTLLSRILELNDTQAGVLDIVFKLADDRGLLLLDMDDLRALLG
                     LVAEERKDISTEYGLVSAQSIAAIQRSVLRLAQDGGEHFFGEPALELADIMRVNHDGR
                     GMIGILAADQLVLKPKLYSTFLLWLLSELFEQLPEVGDLDKPKLVFIFDEAHLLFDDA
                     PPSLVQRIEQVVRLIRSKGVGVYFCSQFPDDVPGNILGQLGNRVQHALRAFTPRDQKA
                     VKTAAETFVPNPKLDVAKVLSQLGTGEALVSTLQDKGIPMPVQQTMIAPPRCRMGPIT
                     DAERAQVRAGSPVGSRYDTAINRESAAELLAQRAQKATEQAQAPAARSREQDEAQEGG
                     FGQSIKDAIFGTKRRQGMIETMAKQTTRTVGTKLGNQIVRGILGGIFGGKR"
     gene            2225..3832
                     /locus_tag="QEL58_003706"
     CDS             2225..3832
                     /locus_tag="QEL58_003706"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010483035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase SLT domain-containing protein"
                     /protein_id="HDS1678132.1"
                     /translation="MPVPVLISRGWPLLALAGLVSLAPDAHAQRVSARDKVKVDALQQ
                     RMTAAEKRYSDALLLVANADPKGSNEADAALEDMEDVLNDCVKQKGCQMGTLLASYKR
                     LLKHDADAAASDDVADEGGDRLEADPDHIGPLTADVPEAARAAALLNDKRHAFDTMVE
                     YNPAVQAGIRRWLTDMRPALLTSYENYQNLRAVMWPEWEKRGLPEALLFGIMAKESNG
                     RVHASSRAGAAGLMQFMPATGRRFGLGPDGTGFDTRFDARSAAEASASYLNERLRELN
                     NNVEMSVAAYNGGEGRAARVFKQSAGQSFWTDSVYNQFPGETKDYVPMVIAAAWIFLH
                     PQQYGVEFPKISAQPATLRLAKSTTIYELTICLGSHGTRDGYMRALRNLNPRYEADGW
                     IPAGTLINATTRIAGLYQRNCVSGPRADLARTLITADLNAAIKRPTAASYTGSVAVGG
                     VVPVADAAASTSVPTTPVAAVATPRPAPARAKPVRSHKVGKGETLGAIAAKFQCDVPT
                     LARANGLKAPAYSLRHGQTLKLQGCDK"
     gene            3856..4203
                     /locus_tag="QEL58_003707"
     CDS             3856..4203
                     /locus_tag="QEL58_003707"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006381474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease E inhibitor RraB"
                     /protein_id="HDS1678133.1"
                     /translation="MDLEDTRNLFANLRENTDWDISGPLLWGYFFVHSTAEPLQALAD
                     HLQAQGYTFVELFEQEPEEGDAPFHVLHVERVEIHDEASLDRRNQEFAALATEKGVED
                     YDGMDVGPAPALQ"
BASE COUNT          694 a         1467 c         1393 g          654 t
ORIGIN      
        1 ggctcgactc tacaacggtg cgtattccac gccgatcacc acaaacgtga actgcccgcc
       61 gggcagctcc accgaaaatt catcatccag ccgcttcttc agcagcgccc gcgccagcgg
      121 cgaatcgatg ctgatccagc ccaggccggc gtcggtctcg tccgggccga cgatgcgata
      181 gcggctggtg tcgccgctgt cgacattctc cagctccacc caggcgccga agaacaccgc
      241 ctgcggatcg gtcggggtgg tgtcgaccac gcgcaacgct tccagccgct tggtcaggta
      301 gcgcacgcgg cggtcgatct cgcccagctg cttcttgcgg tacgtgtact cggcgttctc
      361 cgagcggtcg ccctccgcag cggccgccgc cagtgccttg accacctccg gccgtcgcac
      421 ccgccatagc tcgtccagtt cggccttcag ccgggcgtgg ccggcggcgg tgatcagggc
      481 ggtgctcttt tctgcggggg gacgccaacg ggacatgcag tacgacttct cttgcgatgg
      541 ggaacgggcg cgtcgcacca ggcctggcgc gatgcgcgga aacagcaggt ggccctcagc
      601 gcttgccgcc gaagatgccg cccaggatgc cacgcacgat ctggttgccc agcttggtgc
      661 cgacggtgcg cgtggtctgc ttggccatgg tctcgatcat gccctggcgg cgcttggtgc
      721 cgaagatcgc gtccttgatc gactggccga agcctccttc ctgcgcctcg tcctgctcgc
      781 ggctgcgtgc ggcaggggcc tgcgcctgct cggtcgcctt ctgcgcgcgc tgcgccagca
      841 gctccgccgc cgattcacgg ttgatcgcgg tgtcgtagcg gctgccgacc gggctgccgg
      901 cgcgcacctg ggcgcgttcg gcgtcggtga tcggccccat ccggcagcgc ggcggcgcga
      961 tcatcgtctg ctgcaccggc atcggtatgc ccttgtcctg cagcgtggag accagcgctt
     1021 caccggtgcc aagctggctc agcaccttgg ccacgtccag tttggggttc ggcacgaagg
     1081 tttcggccgc ggtcttcacc gccttctggt cacgcggggt gaacgcacgc agtgcgtgct
     1141 gcacccggtt gccgagctgg ccgaggatgt tgcccggcac gtcgtcgggg aactgcgagc
     1201 agaaatacac gcccacgccc ttggaacgga tcaggcgcac gacctgctcg atgcgctgca
     1261 ccagcgacgg cggcgcatcg tcgaacagca ggtgcgcctc gtcgaagatg aagaccagct
     1321 tcggcttgtc caggtcgccc acttccggca gctgctcgaa cagttccgac agcaaccaca
     1381 gcaggaaggt ggaatacagc ttgggcttga gcaccagctg gtcggcggcg aggatgccga
     1441 tcatgccgcg gccgtcgtga ttgacccgca tgatgtcggc cagctccagc gctggttcgc
     1501 cgaagaagtg ctcgccgcca tcctgggcca ggcgcagcac cgagcgctgg atcgcggcga
     1561 tcgactgtgc gctgaccagc ccgtattcgg tggagatgtc cttgcgctcc tcggccacca
     1621 ggccgagcag ggcacgcagg tcgtccatgt ccagcagtag caggccacgg tcgtcggcca
     1681 gcttgaacac gatgtcgagc acgccggcct gggtgtcgtt caattcgagg atgcgcgaca
     1741 gcagggtcgg gcccatttcg ctgacggtgg tgcgcaccgg atggccgagc ttgccgtaga
     1801 gatcccagaa aatggtcggg ctggcggctg gggcatagtt ggccacgccg atctcggcgg
     1861 cacgctgcag caggttatcg gcgccggtgc cgggcacggc caggccggat acatcgccct
     1921 tcacatcggc caggaacacc ggcaccccca gccgcgagaa gccttcggcc agggtcatca
     1981 gggtcaccgt cttgccggtg ccggtggcgc cggccaccag gccgtggcgg ttgccgagtt
     2041 tcggcagcag ggtgacggca atatcgtcgg taatgccttt gccgagcaga atcggatcca
     2101 tggtccagcc cttgtagtga atagcccaat gttaacgggc aggggtgacg gtccgaaggt
     2161 ccggcttgcc ccgaccttgg cggcgccgct actctgcctg cctgtttcgc acacagtgcc
     2221 atcaatgccc gttcctgtcc tgatttcccg cggttggccg ctgctggccc tggccggcct
     2281 ggtttccctg gcgcctgacg cccatgcgca acgggtctcg gcccgggaca aggtgaaggt
     2341 cgatgcgctg cagcagcgca tgacagccgc cgagaagcgc tacagcgacg ccctgctgct
     2401 ggtcgccaat gccgacccca agggcagcaa cgaggccgac gccgcgctgg aggacatgga
     2461 agacgtcctc aacgactgcg tgaagcagaa gggctgccag atgggcacgc tgctggccag
     2521 ctacaagcgc ctgctcaagc atgacgccga tgcggcggcc agcgatgacg tggccgatga
     2581 gggcggcgac cgcctggaag ccgatcccga ccacatcggt ccgctcaccg cagacgtacc
     2641 cgaggcggcc cgcgccgccg cactgctgaa cgacaagcgg cacgccttcg acacgatggt
     2701 cgagtacaac ccggcggtac aggccggcat ccgccgctgg ctgaccgaca tgcgcccggc
     2761 gctgctgacc agctatgaga actaccagaa cctgcgcgcg gtgatgtggc cggagtggga
     2821 aaagcgcggg ctgcccgagg cgctactgtt cggcatcatg gccaaggaat ccaatggtcg
     2881 cgtgcatgcc tcctcgcgtg cgggtgccgc cggcctgatg cagttcatgc cggccaccgg
     2941 ccgccgcttc ggcctgggcc cggacggcac cggtttcgac acgcgtttcg atgcgcgcag
     3001 cgccgccgaa gccagcgcca gttacctcaa cgagcgcctg cgcgaactca acaacaacgt
     3061 ggaaatgtcg gtggccgcct acaacggtgg cgaaggccgc gccgcgcggg tgttcaagca
     3121 gagcgctggc cagagcttct ggaccgacag cgtctacaac cagttcccgg gcgagaccaa
     3181 ggactatgtg ccgatggtga tcgccgcggc ctggatcttc ctgcacccgc agcagtacgg
     3241 cgtggagttc ccgaagatca gcgcgcagcc ggccacgctg cgcctggcca agtccaccac
     3301 catctacgag ttgaccatct gcctgggcag ccacggcacc cgcgatggct acatgcgcgc
     3361 gctgcgcaac ctcaacccgc gctatgaagc cgatggctgg attccggccg gcacgctgat
     3421 caacgccacc acccgcatcg ccggcctgta ccagcgcaac tgcgtcagtg gcccgcgcgc
     3481 ggacctggcc cgcaccctga tcaccgccga cctgaacgcg gcgatcaagc gcccgaccgc
     3541 ggccagctat accggcagcg tggcggtggg cggcgtggtg ccggtggccg acgccgcagc
     3601 ctcgaccagc gtgccgacga ccccggtggc ggcggtggcg accccgcgcc cggcgcccgc
     3661 ccgggcaaag ccggtgcgca gccacaaggt gggcaagggc gagaccctgg gcgccatcgc
     3721 ggcgaagttc cagtgcgacg tgccgaccct ggcccgcgcc aacggcctga aagcccccgc
     3781 ctacagcctg cgccacggcc agacgctgaa gctgcagggc tgcgacaagt aatccccacg
     3841 acccctggaa cccgcatgga cctcgaagac acccgcaacc tgttcgccaa cctccgcgag
     3901 aacaccgact gggacatcag cggcccgttg ctgtggggct atttcttcgt tcactcgacc
     3961 gccgagccgc tgcaggccct ggccgaccac ctgcaggcgc agggctacac cttcgtcgaa
     4021 ctgttcgagc aggagccgga agaaggcgac gcgccgttcc atgtgctgca cgtggagcgc
     4081 gtggagatcc acgacgaagc ctcgctggac cgccgcaacc aggaattcgc ggccctggcc
     4141 actgaaaagg gcgtggaaga ctacgacggc atggacgtcg gcccggcccc ggccctgcag
     4201 taacgcgc
//
LOCUS       DAOKIP010000275         4161 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.278,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000275 DAOKIP010000000
VERSION     DAOKIP010000275.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 4161)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4161)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4161
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.278"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..1407)
                     /locus_tag="QEL58_003708"
     CDS             complement(<1..1407)
                     /locus_tag="QEL58_003708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012512074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux transporter outer membrane subunit"
                     /protein_id="HDS1678134.1"
                     /translation="MSAGSVFRTFVAATLCTALAACTMGPDFVRPQAELPSHWQGEAV
                     AGNAIDQDAAWWAGFDDPLLGQLASQVLAANLDLQLAANRVQQSRAARGATAADRLPS
                     VSATASGVRARNSEVGLSDPSGNGGREDYGLFQAGIGLSWELDLWGRVRRQVEAADAR
                     VQMAEEDAHAVRIALLAETARDYLQLRATRQLRAITEDNLSIAHDIKRLTEARQRQGV
                     ASTLQVSSAAAQVASLQARIAPLQHRESQLRNALAFLLAQPPQALDAQLQDARRDWPA
                     LPTVAVGVPSELAERRPDIRRAEAALHAATAGIGVAQASFLPRITLNGDAGFQARQLD
                     DLDGWNAHRFSIGPSISLPIFQGGRLKANLALSRLQQQQSALQFRRTVLQAWHEVDDA
                     IDGYAAEQQRTVQLHVAVDESETALGAARRQYQAGVVDMLDVLTTQRIALDNQAALAN
                     SQATAAIARVELYRALGGG"
     gene            complement(1404..2486)
                     /locus_tag="QEL58_003709"
     CDS             complement(1404..2486)
                     /locus_tag="QEL58_003709"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008264620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family secretion protein"
                     /protein_id="HDS1678135.1"
                     /translation="MSLNKTTLNTGLVLGVLALATGSWLLLRDGRYQRTDNAYVNADF
                     TVVAPKVAGFVSSVEVDDNQPVKAGDVLARIDDRDYQVALQAARADLANARAQLANAQ
                     AALAQQGSLIEQARASVDVSRSELTLASADQQRYRELARDGAGTVQNAQQAQSKQAVA
                     SAHLQQGQAALSTARQRTDILTAGVQAAQAAVQRAEAAQARAELDLSHTVLRAPIDGM
                     VGRRAVRVGAYLTPGTPVAAVVPLKRAFVVANFQETQMTRMQAGQQVELKVDVFPGKP
                     LRGHIDSIAPATGVTFAAIAPENATGNFTKVVQRIPVKIVLEPGQPLLEQLRAGMSVE
                     ARVDLDSRVRVQSAQRVQDRTDGEDA"
     gene            complement(2510..4024)
                     /locus_tag="QEL58_003710"
     CDS             complement(2510..4024)
                     /locus_tag="QEL58_003710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDS1678136.1"
                     /translation="MSAITVPQAPAAPLAPAFDRRIVVGLCGVLLVVLLSGFNENVTK
                     VALADIRGGMGFSADDGNWITGIYSAMSVSAMAFAPWCAATFSLRRFGLVMIAAFMVL
                     GVLCPLAPNLPTFLLLRALQGLAGGALPPLLMSVALRFLPPGIKLYGLAGYALTATFG
                     PSMGTPLAALWVEHAGWQFAFWQIVPFCVAGMVMVGWGLPQDPMRLERFAQFNGVGLA
                     LGLPALVMLVLGLTQGARLNWFDSPLITVLLGGGTGLLVLFFINEWFHPLPFFKLQLL
                     AHRNLSYSLVTCVGVLFVLLAVISIPSGFLASVQGYRPLQTAPMLLWVALPQAIALPL
                     VAALMNQRAVDCRWVQAAGLLLLAAACFLGAHLDVQWNRDTFLWVQLLQVVAQPMAVL
                     PLLLLATTGLAPQDGPYASAWFNTVKGFSAVFAGGVLDAVGQTRRHLHSTALIDHLGN
                     QPWLPASADLPARLHVQVQALTSADLYWLVALVALGCLPLLPWATRVHPPRAVA"
BASE COUNT          668 a         1461 c         1432 g          600 t
ORIGIN      
        1 gccaccgccc agcgcgcggt acagctccac ccgtgcaatc gccgcggtgg cctggctgtt
       61 ggccagcgca gcctggttgt ccagcgcgat gcgctgggtg gtcagcacgt ccagcatgtc
      121 gaccacgccg gcctggtact gccggcgcgc cgcacccagt gcggtctcgc tttcgtccac
      181 cgccacatgc agctgcacgg tacgctgctg ctcggctgcg tagccatcaa tggcatcatc
      241 cacttcatgc caggcctgca gcacggtgcg acggaactgc agcgccgatt gctgctgctg
      301 cagccggctc aatgcgaggt tggccttcaa ccgcccgccc tggaagatcg gcaggctgat
      361 cgacggcccg atgctgaacc ggtgcgcgtt ccagccgtcc aggtcatcca gctgcctggc
      421 ctggaaaccg gcatcgccat tcaaggtgat gcgcggcagg aagctggcct gagccacgcc
      481 gatgcccgcc gtcgccgcat gcaatgccgc ttcggcacgg cggatgtccg ggcgacgttc
      541 ggccagttcg ctgggcacgc ccaccgccac cgtcggcaac gccggccagt cacggcgcgc
      601 gtcctgcagc tgtgcgtcca gcgcctgtgg cggttgtgcc agcaggaatg ccagcgcatt
      661 gcgcagctgc gattcgcgat gctgcagcgg tgcgatgcgc gcctgcagcg aagcgacctg
      721 cgccgccgca ctggaaacct gcaaggtgct ggccacaccc tggcgctggc gcgcttcggt
      781 caggcgcttg atgtcgtggg cgatgctcag attgtcctcg gtgatcgccc gcaactgccg
      841 cgttgcacgc agctgcaggt aatcacgcgc ggtttccgcc agcagcgcga tgcgcaccgc
      901 gtgtgcatcc tcctcggcca tctgcacgcg tgcatcggcg gcttccacct ggcggcgcac
      961 gcggccccac aggtccagct cccagctcag gccgataccg gcctggaaca gcccgtagtc
     1021 ctcgcgcccg ccgttgccgg acggatcgct caagcccacc tcgctgttgc gtgcgcgtac
     1081 gccgctggcg gttgcgctga cgctgggcag acggtcggcc gcggtggcac cgcgcgcggc
     1141 gcgactctgc tgcacgcggt tggccgccaa ctgcaggtcc aggttggccg ccagcacctg
     1201 gctcgccagc tggcccagca gcggatcgtc gaagccggcc caccaggccg cgtcctggtc
     1261 gatggcgttg ccggcgaccg cctcaccctg ccagtggctg ggcagttctg cctgcgggcg
     1321 tacgaagtcc gggcccatcg tgcaggcggc cagggccgtg cacagggtgg ccgcaacgaa
     1381 ggttcggaac acgctgccag cgctcatgcg tcctccccgt ccgtgcggtc ctgcacgcgc
     1441 tgcgcgctct gcacgcgcac gcggctgtcc aggtcaacgc gggcttccac cgacatgccg
     1501 gcacgcagct gctccagcag cggctggccc ggctccagca cgatcttcac cggaatgcgc
     1561 tgcaccacct tggtgaagtt gccggtggcg ttttccggcg cgatggcggc aaaggtaacg
     1621 ccagtcgccg gtgcgatgct gtcgatgtgg ccacgcagcg gcttgcccgg gaacacgtcc
     1681 accttcagct caacctgctg gccggcctgc atgcgggtca tctgcgtttc ctggaagttg
     1741 gcgaccacga acgcgcgctt caacggcacc acggcggcca ccggcgttcc cggcgtcagg
     1801 taggcgccaa cgcgtaccgc acggcggccg accatgccgt cgatcggtgc gcgcagcacg
     1861 gtgtgcgaca gatccagttc ggcgcgcgcc tgcgcggctt cggcgcgttg taccgcggcc
     1921 tgcgcggcct gcacaccggc ggtcaggatg tcggtgcgct ggcgtgcggt cgacagcgcg
     1981 gcctggccct gctgcaggtg cgcactggcg accgcctgct tcgactgcgc ctgctgcgcg
     2041 ttctgcacgg tgccggcgcc gtcgcgggcc agttcgcggt agcgctgctg gtcggcgctg
     2101 gccagggtca gttcggagcg gctgacatcg acactggccc tggcctgttc gatcagcgag
     2161 ccctgctggg ccagtgcggc ctgtgcattg gccagctgtg cacgggcgtt ggccaggtcg
     2221 gcacgcgctg cctgcagggc cacctggtag tcgcggtcgt cgatgcgcgc cagcacgtcg
     2281 ccggccttca cgggttggtt gtcgtccacc tcgacgctgc tgacgaagcc ggccaccttc
     2341 ggtgcgacca cggtgaaatc cgcattgacg taggcgttgt cggtgcgctg gtagcgcccg
     2401 tcgcgcagca gcagccagct gccggtcgcc agggccagca cgcccagcac aaggccggtg
     2461 ttgagggttg tcttgttgag gctcatgggg gagtccttgc gggtgagggt caggccacgg
     2521 cacgtggcgg gtggacacgg gtggcccacg gcagcagcgg caggcagccc agggccacca
     2581 gcgcgaccag ccagtacagg tccgccgagg taagcgcctg cacttggacg tgcaggcgcg
     2641 cgggcagatc ggcgctggcg ggcaaccacg gctggttgcc caggtgatcg atcagcgcgg
     2701 tggaatggag gtggcgccgt gtctgtccga ccgcatcaag cacgccaccg gcaaacaccg
     2761 ccgaaaagcc tttgacggtg ttgaaccagg ccgaggcata gggaccgtcc tgcggcgcca
     2821 ggccggtggt cgccagcagc agcaacggca gcaccgccat cggctgtgcc accacctgca
     2881 gcagttgcac ccacaggaag gtgtcgcggt tccactgcac atccaggtgt gcgcccagga
     2941 agcacgccgc cgccagcagc agcagcccgg ccgcctgcac ccagcggcag tccaccgcac
     3001 gctggttcat cagcgcagcc accagcggca acgcaatggc ctgcggcagc gccacccaca
     3061 acaacatcgg cgcggtctgc agcgggcggt agccctgcac actggcgaga aagccggagg
     3121 ggatggagat gaccgccagc agcacgaaca gcacgcccac gcaggtgacc agcgaatagc
     3181 tgagattgcg atgggccagc agttgcagct tgaagaacgg cagcgggtgg aaccactcgt
     3241 tgatgaagaa caacaccagc aggccggtgc cgccgccaag cagcaccgtg atcagcggcg
     3301 aatcgaacca gttcaggcgc gcgccctggg tcaggcccag caccagcatc accagtgccg
     3361 gcaaccccag ggccaggccc acgccgttga actgggcaaa gcgctccagg cgcatcgggt
     3421 cctgcggcag gccccagccg accatcacca tgccggccac gcagaacggc acgatctgcc
     3481 agaacgcgaa ctgccaaccg gcgtgctcga cccacagtgc ggccagcggc gtgcccatgc
     3541 tcggcccgaa cgttgcggtg agcgcgtagc ccgccaggcc atacagcttg atgcccggcg
     3601 gcaggaagcg cagcgccacg ctcatcagca gcggcggcag cgcaccgccg gccaggccct
     3661 gcaatgcgcg cagcagcagg aaagtcggca ggttcggcgc cagcgggcac agcaccccca
     3721 gtaccatgaa ggcggcgatc atcaccaggc cgaagcggcg cagcgagaag gtggccgcgc
     3781 accagggcgc gaaggccatc gcgctgaccg acatggcact gtagatgccg gtgatccagt
     3841 tgccgtcatc ggcactgaac cccatcccac cgcggatgtc ggccagcgcg accttggtga
     3901 cgttctcgtt gaagcccgac agcagcacca ccagcagcac gccgcacaat ccgaccacga
     3961 tgcggcgatc gaacgcgggg gcaagcgggg cggccggggc ctgtggcacg gtgatcgcgc
     4021 tcatgggcgc gggccgatcc gtgcggcgca cggcaggtga agcgacatgg cgtgcgctcc
     4081 gtgaatgtgg ggagcgcagt ctaggcaggc ccactgctgc gaaaaatggc gtggatgcga
     4141 tgccaggcgt gcgcgggacg c
//
LOCUS       DAOKIP010000276         4161 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.279,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000276 DAOKIP010000000
VERSION     DAOKIP010000276.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 4161)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4161)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4161
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.279"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(157..1278)
                     /locus_tag="QEL58_003711"
     CDS             complement(157..1278)
                     /locus_tag="QEL58_003711"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005914989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic phosphate transporter"
                     /protein_id="HDS1678137.1"
                     /translation="MLTLVLVVILAALVFEFINGFHDTANSIATVVATKVLSPGWAVM
                     LAAFMNLIGALTGTAVALTIASGLLNTNVVDVTPQVILCALLGGIIWNLITWWKGLPS
                     SSSHALIGGLCGAGLAAAHNNWDALIWSERLGSWAQNKGLLWKVFVPMITSPIAGFLL
                     GIVVMVLLWGLIAGLAKIGGAIGRLARPRIVNAFFGKAQIASAAYMGFAHGHNDAQKT
                     MGIIAMTLIGAEATGALNDLPSWLAFMHPDAHAGDGIAMWIVLTCAVVMAAGTASGGW
                     KIIKTLGHKMVKLHPIHGFAAETSSATILTLAAHFGMPVSTTHSISTAIMGVGFAKNP
                     RSLKFGVIERIVWAWILTIPAAGGCAYLILKLFELFGWT"
     gene            complement(1292..1918)
                     /locus_tag="QEL58_003712"
     CDS             complement(1292..1918)
                     /locus_tag="QEL58_003712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005992439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF47 family protein"
                     /protein_id="HDS1678138.1"
                     /translation="MFSLQTIFGSGKQFYTLLDEAAVAASDAAKALHSMLREADRQPA
                     LDAFKLARLRERAASDKISQALVDSFMTPIEREDIEALGSALYKIPKQIEKFADRYSL
                     ATTHLEHIDFAPRAAMLEQAASVVVEMVADLRHMNLDRMTALNEKLRSLENEADRLML
                     ELYRDIYSGRLDNLQMFLLKEFFEILEKAIDRCREAGVVAYQIVLKNS"
     gene            2214..3518
                     /locus_tag="QEL58_003713"
     CDS             2214..3518
                     /locus_tag="QEL58_003713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyC/CorC family transporter"
                     /protein_id="HDS1678139.1"
                     /translation="MILIVFALVLLNGFFAMSEMSVMTSRKSRLKQMAATSKRAAKAL
                     ELSEKPESFLSTVQIGITVIGVLTGYLGGEALGEAFAGWIQGLMPGFAYAGNVGTALA
                     VSLITFITLIFGELVPKRLALTRSEAIAGLVAMPMSWLAKLALPFVWLLSRTTQLVLR
                     LFGLGKDEVASVTEEEIRMLVAESHEAGVIDAHERDMMNRVMRLGDRTADSLMTPRNR
                     IAWLDTQAGLERNLEIMAEHEFSRYPVYRDNDMDVVGVLELKSLATRMARGDTALFQT
                     LREPLYVSESTHAMKLLEIFREEQQSMALVVDEYGEIQGLVTISDLMGAVVGRLQAVE
                     NADEDALVVTREDGSLLVDGSLPIEDLRELIGSNDLPDAEDGDYYTLAGMCIHYFGRI
                     PHAGEYFDWAGWRFEVVDLDGARVDKLLLRTLSDEQADELTA"
     gene            3502..4161
                     /locus_tag="QEL58_003714"
     CDS             3502..4161
                     /locus_tag="QEL58_003714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019658891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exopolysaccharide biosynthesis protein"
                     /protein_id="HDS1678140.1"
                     /translation="MSLPPEAGQGPGAERPAYRNEGIRTLLEMFASGDPAEHMPLGQI
                     LCNLQQSAFGVFLFVAILPSFIPIPGMGGAVSGPLVILIGLQMLCCLRRPWLPGFIAR
                     RGPKRGTMHRFLDRIDRPLRRLDKMLKPRLSQLLTPLPAHAFTGLLLVLLGVLLSLPI
                     PFTNFLFGFQLLLFALALLERDGALMLFNWITALAAIAFFGFSSGQLVGYTVELFQRW
                     F"
BASE COUNT          702 a         1350 c         1370 g          739 t
ORIGIN      
        1 ggatgccgac cgttggctgg cacgggatcg gatcccggtt tctgctctgg tgggtgtcga
       61 ccttggtcga cacgatggat gcggaaaaat tctttgccca tgaaaaaagc ccgccggaat
      121 ccggcgggct tttcttgtgc aacgtgtgcc tgcagatcag gtccagccga acagctcgaa
      181 cagcttcagg atcaggtagg cacagccacc ggccgccggg atggtcagga tccaggccca
      241 gacgatgcgt tcgatcacgc cgaacttcag cgaacgcggg ttcttggcga agccgacgcc
      301 catgatcgcg gtggagatgc tgtgcgtggt cgagaccggc atgccgaagt gggcggccag
      361 ggtgaggatg gtggccgagc tggtttccgc ggcgaagcca tggatcggat gcagcttgac
      421 catcttgtgg cccagggtct tgatgatctt ccagccgccc gaggcggtac cggcggccat
      481 caccacggcg caggtcagta cgatccacat cgcgatgccg tcaccggcat gggcgtccgg
      541 gtgcatgaag gccagccagg acggcaggtc gttcagtgcg ccggtggctt cggcaccgat
      601 cagggtcatc gcgatgatgc ccatggtctt ctgtgcgtcg ttgtggccgt gggcaaagcc
      661 catgtaggcc gccgaggcga tctgtgcctt gccgaagaac gcgttgacga tgcgtggacg
      721 ggccaggcgg ccgatggcac caccgatctt ggccaggccg gcgatcagcc cccacagcag
      781 caccatcacc acgatgccaa gcaggaagcc ggcgatcggc gaggtgatca tcggcacgaa
      841 caccttccac agcaggccct tgttctgcgc ccagctgccc aggcgctcgg accagatcag
      901 cgcgtcccag ttgttgtgcg cagcggccag gccagcgccg cagaggccgc cgatcagcgc
      961 gtgcgaggac gaggacggca gccccttcca ccaggtgatc aggttccaga tgatgccgcc
     1021 cagcagggcg cacaggatca cctgcggggt gacgtcgacc acgttggtgt tgagcaggcc
     1081 cgaggcgatg gtcagcgcca ccgcagtacc ggtcagtgca ccgatgaggt tcatgaaggc
     1141 ggccagcatc accgcccagc cgggcgagag caccttggtc gccaccacgg tggcaatgga
     1201 gttggcggtg tcgtggaagc cgttgatgaa ctcgaaaacg agcgcggcca ggatcaccac
     1261 caggacaagg gtcaacatgc ggcggcgtcc gtcagctgtt cttcaacacg atctggtacg
     1321 ccaccacgcc ggcctcgcgg cagcggtcga tggccttttc caggatctcg aagaattcct
     1381 tcagcaggaa catctgcagg ttgtccaggc ggcccgaata gatgtcgcgg tacagctcga
     1441 gcatcagccg gtcggcctcg ttctccagcg agcgcagctt ctcgttgagc gcggtcatcc
     1501 ggtccaggtt catgtggcgc aggtcggcca ccatctccac caccacactg gcagcctgct
     1561 ccagcatcgc cgcgcgcggc gcgaagtcga tgtgctccag gtgggtcgtg gccagcgaat
     1621 agcgatcggc gaacttctcg atctgcttgg gaatcttgta cagcgccgaa cccagcgctt
     1681 cgatgtcttc gcgctcgatc ggggtcatga agctgtccac cagcgcctgg ctgatcttgt
     1741 ccgaggccgc gcgttcgcgc aggcgggcca gcttgaaagc gtccagcgcc ggctggcggt
     1801 cggcctcgcg cagcatggaa tgcagcgcct tggcggcgtc ggaagccgcg acggcggcct
     1861 catcgagcag ggtgtagaac tgtttgccgg aaccgaaaat ggtctgcaga gagaacattg
     1921 agaaacctgt cagccgtcgc gggaaggacg gcaccagacg gaattatgac ggctagatga
     1981 ccatctcggg tatccctgcc ccctttccgg gccttggccc gcccaacctg aacaggcagt
     2041 tgccaccctg ccacgcccct ttgctaagat gccagcgcgc cttcgggcgc accttcttat
     2101 ggacgacgac ccttatcccc cagcgccgcg ccggaccccg ctcctgagcg ccagccgcca
     2161 tcgcaagcac ccgccctccc tgccaccaac cggggacgac gcccgtgttt gaaatgatcc
     2221 tgattgtctt cgcgcttgtt ctgctgaacg gcttcttcgc catgtccgag atgtcggtca
     2281 tgacctcgcg caagagccgc ctgaagcaga tggccgccac ctccaagcgg gccgccaagg
     2341 cactggaact gtcggaaaag ccggagagct tcctgtccac cgtgcagatc ggcatcaccg
     2401 tgatcggcgt gctgaccggc tacctcggcg gtgaagcgct gggcgaggcc ttcgccggct
     2461 ggatccaggg cctgatgccg ggctttgcct acgctggcaa cgtcggcact gcgctggcgg
     2521 tcagcctgat caccttcatc accctgatct tcggcgagct ggttcccaag cgcctggcgc
     2581 tgacccgttc ggaggccatt gccggcctgg tggcgatgcc gatgagctgg ctggccaaac
     2641 tggcccttcc cttcgtgtgg ctgctgtcca ggaccaccca gctggtgctg cggctgttcg
     2701 gcctgggcaa ggatgaagtc gcctcggtaa ccgaagaaga gatccgcatg ctggtggccg
     2761 aaagccatga ggccggcgtg atcgatgccc acgagcgcga catgatgaac cgtgtcatgc
     2821 gcctgggcga ccgcaccgcc gacagcctga tgaccccgcg caaccgcatt gcctggctcg
     2881 acacccaggc cgggctggag cgcaacctgg agatcatggc cgagcatgag ttctcgcggt
     2941 acccggtgta ccgcgacaac gacatggacg tggtcggcgt gcttgagctg aagtcgctgg
     3001 ccacgcgcat ggcgcgcggc gacaccgcac tgttccagac cctgcgcgag ccgctgtacg
     3061 tttccgaatc gacccatgcg atgaagctgc tggagatctt ccgcgaggaa cagcagtcga
     3121 tggcgctggt ggtggacgag tacggcgaga tccagggcct ggtgaccatc agcgacctga
     3181 tgggggccgt ggtcggccgc ctgcaggcgg tggagaacgc cgacgaggat gcgctggtgg
     3241 tgacccgcga ggatggctcg ctgctggtgg atggctcgct gccgatcgag gacctgcgtg
     3301 agctgatcgg cagcaacgac ctgcccgatg ccgaggacgg cgactactac acgctggccg
     3361 gcatgtgcat ccactacttc ggccgcatcc cgcatgccgg cgaatacttc gactgggccg
     3421 gctggcgatt cgaagtcgtc gacctggacg gtgcgcgggt ggacaagctg ctgctgcgca
     3481 cgttgtccga cgagcaggcc gatgagctta ccgcctgagg ccggccaggg tccgggcgcc
     3541 gagcgcccgg cctaccgcaa cgagggcatc cgtaccctgc tggagatgtt cgcctccggc
     3601 gacccggccg agcacatgcc gctcggccag atcctgtgca acctgcaaca gagcgcgttc
     3661 ggcgtgttcc tgttcgtggc gatcctgccg tcgttcatcc cgatcccggg catgggcggc
     3721 gcggtcagcg gcccgctggt gatcctgatc ggcctgcaga tgctgtgctg cctgcgccgc
     3781 ccgtggctgc ccggcttcat cgcccgccgc gggccgaagc gcggcaccat gcaccgcttc
     3841 ctcgaccgca tcgaccggcc gctgcggcgc ctggacaaga tgctgaaacc gcgcttgtcg
     3901 cagctgctga ccccgctgcc ggcgcacgcg tttaccggcc tgctgctggt actgctgggc
     3961 gtactgctgt cgctgccgat cccgttcacc aacttcctgt tcggcttcca gctgctgctg
     4021 ttcgcactgg cattgctgga acgcgatggc gcgctgatgc tgttcaactg gattaccgcg
     4081 ctggcggcca tcgcgttctt tggtttcagt tccgggcaac tggtgggcta cacggtggag
     4141 ctgttccagc gctggttctg a
//
LOCUS       DAOKIP010000277         4089 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.281,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000277 DAOKIP010000000
VERSION     DAOKIP010000277.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 4089)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4089)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4089
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.281"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..863)
                     /locus_tag="QEL58_003715"
     CDS             complement(<1..863)
                     /locus_tag="QEL58_003715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HDS1678141.1"
                     /translation="MKGILGTTAIIIAALTAAPASAGTLYKCQGADGVTSYVSKRVAG
                     AVCSSISYSRDTRPAPRPVVTAPKPAPATTVASIERNPVAVAASAATPAVAAPAPAPA
                     SVPTAATASRGGRMVSGQVYSFMKDGVRHYTSARPTQVANLGPVRTIRYSFMERCYAC
                     GVNPRVDFGTVRLNTTAFQSEITSAAREFGVEEAVVRAIIHAESAYNPTALSRAGAQG
                     LMQLMPPTAARFGVSDSYDAGQNIRGGVQYLAWLLKRFNGNLTLAAAGYNAGEGAVDR
                     HGGVPPYSETQ"
     gene            complement(910..1878)
                     /locus_tag="QEL58_003716"
     CDS             complement(910..1878)
                     /locus_tag="QEL58_003716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YafY family transcriptional regulator"
                     /protein_id="HDS1678142.1"
                     /translation="MRHTAHRLLRLIALLQARRQWSGAELAERMGVDRRSIRRDIERL
                     RELGYPVQASAGVGGGYQLGAGAPVLPMLLDEEEATTLAIALRAASATVAGIDDTARG
                     LLSKLDPLVPTRRRQQAGEVHAATATLSDLPATDARLLGRLAQHCRQASRLAFEYRSA
                     QDAVTQREVEAQHLVNYGRRWYLLAWDLGRQDWRTLRVDRMGAVRECTEPGLHRRTPA
                     PPDVMVRQAVSQAPFALQAILRLAGSHSELEGRIPPWCGVLEADGTDHCLLRMGAESR
                     GMMLAQILSLDRVPVALWTTPPELRDELAQRLAGLGQLLAVPSVTA"
     gene            1959..2579
                     /locus_tag="QEL58_003717"
     CDS             1959..2579
                     /locus_tag="QEL58_003717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008264796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HDS1678143.1"
                     /translation="MTSRQITLYHAARSRSSGAVALLEALGADYRMQVLDLKAGANLA
                     PAYLAINPMGKVPAIVHNGALVTEQVAIYLYLADLYPEAGLAPPIGDALRGPYLRWMA
                     FYGACFEPAMIDKAMHREPPPRLMSPYNDAETVLQVIEAQLAQGPYLLGETMSAADVL
                     WGNALAWTSAFGLVQPAPATAAYIERISAMTAFDRSRQIDAELAAA"
     gene            2686..>4089
                     /gene="miaB"
                     /locus_tag="QEL58_003718"
     CDS             2686..>4089
                     /gene="miaB"
                     /locus_tag="QEL58_003718"
                     /EC_number="2.8.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012479666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (N6-isopentenyl
                     adenosine(37)-C2)-methylthiotransferase MiaB"
                     /protein_id="HDS1678144.1"
                     /translation="MTGTPDVFPPAPGGTPLVALPAGPRKPDQVKGKLYIKTHGCQMN
                     EYDSAKMADVLAASDGLELTDSPDDADVILVNTCSIREKAQEKVFSQLGVWKGLKNKG
                     REVIIGVGGCVASQEGEAIIKRAPFVDLVFGPQTLHRLPELIRARREQKRPQVDISFP
                     EIEKFDRLPEPRAEGASAFVSIMEGCSKYCSFCVVPYTRGTEVSRPFEDVVVEVAQLA
                     AQGVREINLLGQNVNAYRGPYGDGEFADLGLLIRTIAEIDGVGRIRFTTSHPLEFSDS
                     LIDAFRDVPQLANFLHLPVQAGSDRVLSAMKRGYTALEFKSKIRKLRAVRPDISISSD
                     FIVGFPGETDADFEKTMKLIEDIGFDHSFSFIYSRRPGTPAADLEDTISDAEKHARLS
                     RLQDRINAHAAGISEKMVGTVQTVLVEGPSRKNPNELTGKTENMRSVNFPAPARLIGQ
                     FVDVVITEALTNSLRARV"
BASE COUNT          655 a         1405 c         1408 g          621 t
ORIGIN      
        1 tactgggttt cactgtaggg tggcacgccg ccgtggcggt cgaccgcgcc ctcgcccgcg
       61 ttgtagccgg ctgccgcgag ggtcaggttg ccattgaagc gtttcagcaa ccatgccaga
      121 tactgcacgc cgccgcggat gttctgcccg gcgtcgtagg aatcactgac gccgaagcgg
      181 gcggcagtcg gtggcatcag ctgcatcagg ccctgcgcac cggcacggct gagcgcggtc
      241 gggttgtagg cggattcggc gtggatgatc gcgcgcacta cggcctcctc aacaccgaac
      301 tcgcgcgcgg ccgaggtgat ctcgctctgg aacgccgtgg tgttcaggcg caccgtgccg
      361 aagtccacgc gcggattgac cccgcaggcg tagcagcgct ccatgaagct gtagcggatg
      421 gtccgcaccg ggcccaggtt ggccacctgg gtcggccgcg cactggtgta gtggcgcacg
      481 ccatccttca tgaaggaata gacctggccg ctgaccatcc gcccaccgcg cgaggcggtt
      541 gcggccgtgg gcacggaagc aggtgcaggt gcgggtgcag ccactgcggg cgtcgcagca
      601 ctggccgcga cggcaaccgg attgcgctcg atgctggcca cggtggtggc tggcgcgggt
      661 ttcggcgcgg tcaccacagg gcgcggcgcc gggcgggtat cgcggctgta gctgatgctg
      721 ctgcagacgg cgccggccac gcgcttgctc acataactgg tgacgccgtc ggcgccctgg
      781 cacttgtaca gggttccggc gctggccggc gcagcggtca gcgcagcgat gatgatcgcc
      841 gttgtcccca gtatcccctt catggcggcg agtgtcccag cttcgccggg gcttgccaag
      901 cgatgcggct caggctgtga ccgacggcac agccagcagc tggcccaggc ccgccaggcg
      961 ctgcgccagt tcgtcgcgca gctccggggg cgtggtccac agcgccacgg gcacgcggtc
     1021 caggctgagg atctgcgcca gcatcatgcc gcggctctcg gcccccatcc gcagcaggca
     1081 atggtcggtg ccatcggcct ccagtacccc gcaccacggc ggaatccggc cttccagctc
     1141 ggaatggctg ccggccaggc gcaggatggc ctgcagcgcg aacggcgcct ggctgacggc
     1201 ctgccgcacc atcacatccg gcggtgccgg cgtgcgccga tgcaggcccg gctcggtgca
     1261 ttcgcgcacc gcgcccatcc ggtccacgcg cagggtgcgc cagtcctggc ggcccagatc
     1321 ccaggccagc aggtaccagc ggcggccata gttgaccaga tgctgggctt cgacctcacg
     1381 ctgggtgacc gcgtcctgcg cactgcggta ctcgaaggcc aatcgcgacg cctgccggca
     1441 gtgctgcgcc agccgtccga gcaggcgtgc atcggtggcg ggcaggtccg acagcgtggc
     1501 ggtggcggca tgcacctcgc cggcctgctg gcgacgacgg gttggcacca gcggatccag
     1561 cttggacaac aggccgcgtg cggtgtcgtc gatgccggcg acagtggccg aggccgcgcg
     1621 cagggcgatg gccagggtgg ttgcttcctc ttcgtccagc agcatcggca gtaccggcgc
     1681 accggccccc agctggtagc cgccgccgac tccggccgag gcctgcaccg ggtagcccag
     1741 ttcgcgcagg cgctcgatgt cgcggcggat gctgcgccgg tccacgccca tgcgttcggc
     1801 cagctcggcc cccgaccact ggcggcgggc ctgcaacagg gcgatcaggc gcagcagtcg
     1861 atgggcggta tggcgcatga aggatcgagg acagaagtcg tccgcaatag tgccccagga
     1921 tggcctccag ttcaccaccc accgcaagga gcaatgccat gacctcacgc cagatcaccc
     1981 tgtaccacgc cgcccgttca cgctcgagcg gcgccgtggc cctgctcgaa gcgctgggtg
     2041 ccgactaccg catgcaggtg ctggacctga aggccggcgc caacctggcc ccggcctacc
     2101 tggccatcaa cccgatgggc aaggtaccgg ccatcgtcca caacggtgcg ctggtgaccg
     2161 aacaggtggc gatctacctg tacctggccg acctgtaccc ggaagcgggg ctggcaccgc
     2221 cgatcggtga cgccctgcgc gggccctacc tgcgctggat ggccttctac ggtgcctgct
     2281 tcgagccggc gatgatcgac aaggcgatgc accgcgagcc gccgccgcgc ctgatgtcgc
     2341 cgtacaacga cgccgagacc gtgctgcagg tgatcgaggc ccagctggcg cagggaccgt
     2401 acctgctggg cgagacgatg agcgccgccg acgtgctgtg gggcaatgcg ctggcctgga
     2461 ccagtgcttt cggcctggtg cagccggcgc cggccacggc cgcctacatc gaacggatca
     2521 gcgcgatgac ggcgttcgac cgctcgcggc agatcgacgc ggagctggca gcggcgtaat
     2581 cgcgccgcgc ccccgccggg gccgaccagc cacgggcgga cggcgggagg gccgggatgc
     2641 gggtagaatt gcccgctttc ccgccacccg aatggattaa gcgccatgac cgggacgcca
     2701 gacgtctttc cgcccgcccc cggcggtacc ccgctcgttg ccctgcccgc cggtccgcgc
     2761 aagcccgacc aggtgaaagg caagctgtac atcaagaccc acggttgcca gatgaacgag
     2821 tacgactcgg ccaagatggc cgacgtgctt gccgccagcg atggcctgga actgaccgac
     2881 agccccgatg acgccgacgt catcctggtc aacacctgtt ccatccgcga gaaggcgcag
     2941 gaaaaggtgt tcagccagtt gggcgtgtgg aagggcctga agaacaaggg ccgtgaagtg
     3001 atcatcggcg tgggcggctg cgtcgcctcg caggaaggcg aggcgatcat caagcgcgcg
     3061 ccgttcgtgg acctggtgtt cggcccgcag accctgcacc gcctgccgga actgatccgt
     3121 gcccgccgcg agcagaagcg cccgcaggtg gacatcagct tccccgagat cgagaagttc
     3181 gaccgcctgc ccgagccgcg cgccgagggc gcctcggcct tcgtgtcgat catggaaggt
     3241 tgctccaagt actgctcgtt ctgcgtggtg ccctacaccc gcggcaccga ggtcagccgt
     3301 ccgttcgagg atgtggtggt ggaagtggcc cagctggccg cgcagggcgt gcgcgagatc
     3361 aacctgctcg ggcagaacgt caacgcgtac cgcgggccgt atggcgatgg cgagttcgcc
     3421 gacctcggcc tgcttatccg caccatcgcc gagatcgacg gtgtcggccg catccgcttc
     3481 accacctcgc acccgctgga gttcagcgat tcgctgatcg acgcgttccg cgacgtgccg
     3541 cagctggcca acttcctgca cctgccggtg caggccggca gcgaccgcgt gctgtcagcg
     3601 atgaagcgcg gctacaccgc gctggaattc aagtcgaaga tccgcaagct gcgcgcggtg
     3661 cgcccggata tctcgatcag ttcggacttc atcgtcggct tccccggcga gaccgatgcc
     3721 gatttcgaga agaccatgaa gctgatcgag gacatcggct tcgatcacag cttctccttc
     3781 atctattcgc gtcgaccggg aacgccggct gcggacctgg aggacacgat cagcgatgcc
     3841 gagaagcacg cgcgcctgtc gcgcctgcag gatcgcatca atgcgcacgc cgccggcatc
     3901 tccgagaaga tggtcggcac cgtgcagacc gtgctggtgg aaggcccgtc gcgcaagaac
     3961 ccgaacgagt tgaccggcaa gaccgagaac atgcgttcgg tgaacttccc ggcaccggcg
     4021 cgcctgatcg gccagttcgt ggacgtggtg atcaccgaag cgctgaccaa ctcgctgcgc
     4081 gcgcgggtg
//
LOCUS       DAOKIP010000278         4079 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.282,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000278 DAOKIP010000000
VERSION     DAOKIP010000278.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 4079)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4079)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4079
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.282"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..781)
                     /locus_tag="QEL58_003719"
     CDS             complement(<1..781)
                     /locus_tag="QEL58_003719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014035773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1678145.1"
                     /translation="MQDAQYWLNEFWTGLSVLDLLGGSVLGTLLGLALGILGWRWLHR
                     RGWLQRRTRWHHWLLASYVVLLPLATAFFGLQLGFTAGAHRALFKQLDHFQPHLQTLV
                     EGWSEGFTDSLDDPRMREALRSQGTVGDVADIVASAYLSEHPLPGLDRLGDGPLARGV
                     GWVIGKVREGLLRGMVEDTLVDKAGTIGLEPKVVREALTMHVDELLHTRGVLRLVKAQ
                     INGMMPGVYFGLLLPLLVIALLVALEIWAARRFGWTRQVASY"
     gene            990..1391
                     /locus_tag="QEL58_003720"
     CDS             990..1391
                     /locus_tag="QEL58_003720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1678146.1"
                     /translation="MAKLTLASVDALRTRFADDAACDAALAAFADTAAVRAPLRDLVE
                     AQHRYLQAEFEVAQVADVLRRDQKYAPVGRPSINIVQLRKQQAATKQAALIARQVVAQ
                     AAQTFVRVSGLAVKAKQSPSEACAAWLGALR"
     gene            complement(1633..2340)
                     /locus_tag="QEL58_003721"
     CDS             complement(1633..2340)
                     /locus_tag="QEL58_003721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012509871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyisoprenoid-binding protein"
                     /protein_id="HDS1678147.1"
                     /translation="MSATRKLLLPLALTLAIAACSKPADTAAPAADAAAPATTEQAAT
                     PAADAAAAAPAAEAIKIASGTYKLDPSHTDVLAQWSHFGFSNPSAHFGNVEGTLVYNA
                     EDVTKSTVEVKLPLSGLNSFTAKFDEHLKSADFFDAAKFADATFKSTKVEAAGTNKLT
                     VTGDLTIKGITKPVTLDVTVNGGGEHPMAKVPAAGFDATTTLKRSDFGVGAYAPNVSD
                     EVKIRITTEATGEKPAA"
     gene            complement(2416..3006)
                     /locus_tag="QEL58_003722"
     CDS             complement(2416..3006)
                     /locus_tag="QEL58_003722"
                     /EC_number="1.1.1.298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011038689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malonic semialdehyde reductase"
                     /protein_id="HDS1678148.1"
                     /translation="MSHALDAAALDQLFRTARTQNAFLDKPVPASLLQELYDLVKWGP
                     TAANTTPARFVFVTSKEAKAKLAPALSEGNHDKTMAAPVTVIIGFDLDFHEKLPYLFP
                     HADAKAWFDGPQEGRHEAAIRNGSLQGAYLILAARALGLDAGPMSGFDAAKVDEAFFA
                     GTSIKSNFLVNLGYGDPAGLFPRLPRLSFDEAARIA"
     gene            3133..>4079
                     /locus_tag="QEL58_003723"
     CDS             3133..>4079
                     /locus_tag="QEL58_003723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019662187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mitochondrial fission ELM1 family protein"
                     /protein_id="HDS1678149.1"
                     /translation="MVKRSSAPWTVTDGRAGNVRQAVALASALRQGTHRPLVLQPRAP
                     WRWLSPRRLPGDVNGYGEAFATLAAEAPALAIGCGRQAAGALRVLRARGSQVVQILDP
                     RISARHWDVVVVPEHDTLRGSNVLTLLGSLNPVDDDWLAWGRAAFAGFSTLPGPRTAL
                     LVGGPTPLAPWDEPAMVGVFRALAEQIRSEGGSLLATTSRRTPPALAEILRATFADLP
                     HVIWGDGGDGVNPYGGLLGWANRVVVSPDSVNLLSEACATRMPVRVALADTAQGRLAR
                     FQQQLRERGRLQERWLDWQYDRIEPLRETARIAAEVKQRL"
BASE COUNT          651 a         1344 c         1438 g          646 t
ORIGIN      
        1 cgtaggatgc cacctgccgc gtccacccga accgccgcgc ggcccagatc tccagcgcta
       61 ccagcagcgc gatgaccagc agcggcagca gcagcccgaa gtacacaccg ggcatcatgc
      121 cgttgatctg cgccttcacc agccgcaaca cgccccgcgt gtgcagcagc tcatcgacat
      181 gcatggtcag cgcctcgcgc actaccttcg gctccaggcc gatcgtgccg gccttgtcca
      241 ccagcgtgtc ttccaccatg ccgcgcagca ggccttcgcg caccttgccg atcacccagc
      301 cgacgccgcg cgccagcggt ccatcgccaa ggcggtcgag gcccggcagc ggatgctcgc
      361 tcaggtaggc cgaggccacg atatcggcga catcgcccac cgtgccctgg ctgcgcagcg
      421 cctcgcgcat gcgcgggtcg tccagtgaat cggtgaagcc ttcgctccag ccttccacca
      481 gcgtctgcag gtgcggctgg aaatgatcga gctgcttgaa cagcgcgcgg tgcgcaccgg
      541 cagtgaagcc cagttgcagg ccgaagaagg cggtggccag cggcagcagc accacatagc
      601 tggccagcag ccagtgatgc cagcgcgtgc gccgctgcag ccaaccgcgg cggtgcagcc
      661 agcgccagcc gaggatgccc aacgccaggc ccagcagcgt gccgagcaca ctgccgccca
      721 gaagatcgag cacgctcagg cccgtccaga attcgttcaa ccagtactgc gcgtcctgca
      781 tgggtcttcc ttccgtgggt gggctgcacg cgaatgccag ccgggtagag tcgactgtta
      841 gtcgactatc gcgcgcagcg cgggggtttc cggcatcgcg cgaagagcag tcgactaaca
      901 gtcgactcta ccaaagcgga ggcctcccgg cccggagcac gcccagcaat gcgacaatcg
      961 cgctcctttc ctgcagcaac gaggcccaca tggccaaact gaccctggcc agcgtggatg
     1021 cgctgcgtac ccgcttcgct gatgacgctg cgtgcgatgc cgcgctggcc gccttcgccg
     1081 acactgcggc cgtgcgtgcg ccgctgcgcg acctggtgga agcacagcac cgctacctgc
     1141 aggccgaatt cgaagtggcg caggtggccg atgtgctgcg ccgcgaccag aagtacgcac
     1201 cggtcggccg gccgtcgatc aacatcgtgc agctgcgcaa gcagcaggcc gcgaccaagc
     1261 aggccgcgtt gatcgcacgt caggtggtgg cgcaggccgc gcagaccttc gtgcgcgtga
     1321 gcgggctggc ggtgaaagcc aagcagagcc cgagcgaggc gtgtgcagcg tggttgggcg
     1381 cgctgcgctg agcgcgcgta tccggtagtg gccaaccttg gttggcctgc ggagtgcccg
     1441 tgcgccaacc aaggttggca cccaccaacg gcacttcggc cctgcatgaa tcggtagtgg
     1501 ccaaccttgg ttggcctgca cagagcccgc gtgccaacca aggttggcac ctaccagggc
     1561 gtgtcccccc aaaaaagaag gcccgctttt cagcgggcct tctgccttct cacgacgagt
     1621 gagcggggtg catcaagcgg ccggcttttc gccggtggct tcggtggtga tgcggatctt
     1681 cacttcatcg ctgacgttcg gggcgtaggc gccgacgccg aaatcgctgc gcttcagcgt
     1741 ggtggtggca tcgaagccag ccgccggaac cttggccatc gggtgctcgc cgccgccgtt
     1801 gacggtgacg tccagggtga ccggcttggt gatgcccttg atggtcaggt cgccggtgac
     1861 ggtcagcttg ttggtgccgg ccgcttccac cttggtgctc ttgaaggtgg catcggcgaa
     1921 cttggcggcg tcgaagaagt cggcgctctt caggtgttcg tcgaacttgg cggtgaagct
     1981 gttcaggccg ctcagcggca gcttcacttc cacggtggac ttggtcacgt cttcggcgtt
     2041 gtacaccagg gtgccttcaa cgttgccgaa gtgcgcgctg gggttggaga agccgaagtg
     2101 gctccactgc gccagcacgt cggtgtggct cgggtccagc ttgtaggtgc ccgaggcgat
     2161 cttgatcgct tcggccgccg gcgcggcagc ggcggcatca gcggccgggg tggcagcctg
     2221 ttcggtggtg gccggggcag cagcatccgc ggccggggca gcggtgtcgg ccggcttgga
     2281 gcaggcggcg atggccaggg tcagggccag cggcagcagc agtttacggg tggcgctcat
     2341 ctgaggaact ctccggatcg tagggtgggt gcaacagggg ccgccaaggt gacggcccga
     2401 aaccgataca gcgacttacg cgatgcgcgc cgcttcgtcg aacgacaggc gcggcagacg
     2461 cgggaacagg cccgccgggt caccgtaacc caggttgacc aggaaattcg acttgatcga
     2521 ggtaccggca aagaacgcct cgtccacctt ggccgcatcg aagccggaca tcgggccggc
     2581 atccaggccc agcgcgcgcg cggccaggat caggtaggcg ccctgcaggc tgccgttgcg
     2641 gatggcggct tcgtggcggc cttcctgcgg gccgtcgaac caggccttgg catcggcgtg
     2701 cgggaacagg tacggcagct tttcgtggaa gtccaggtcg aagccgatga tgacggtaac
     2761 cggggcggcc atggtcttgt catggttgcc ttcggacagg gccggggcca gcttggcctt
     2821 ggcttccttc gaggtgacga agacgaagcg ggccggcgtg gtgttggccg cggtcgggcc
     2881 ccacttcacc aggtcgtaca gttcctgcag caggctggcc gggaccggct tgtcgaggaa
     2941 ggcgttctgg gtacgggcag tgcggaacag ctgatcgagg gcagcagcgt cgagcgcgtg
     3001 ggacatcggt ggatctccag ggcggcgaag ggaagtcagt gcccgcgggc ggcgcggggc
     3061 gaatcgacga gccgcagtgt agagtgtcgc gactgttgca acacccagca gggctgaaac
     3121 gaattaatgc caatggtgaa acgatcgagc gcaccctgga cggtcactga cggccgcgcg
     3181 ggcaatgtcc gccaggcggt tgcgctggcc tcggcgttgc gccagggcac ccatcggccg
     3241 ctggtgctgc agccgcgcgc accctggcgc tggctgtcgc cgcggcgcct gcccggcgat
     3301 gtgaacggct acggcgaagc cttcgcgaca cttgccgccg aggccccggc gctggcgatc
     3361 ggctgtggcc gccaggccgc cggtgccctg cgcgtgctgc gtgcgcgcgg cagccaggtg
     3421 gtgcagatcc tcgatccgcg tatcagtgcc cgccattggg atgtggtggt ggtgcccgaa
     3481 cacgacaccc tgcgcggcag caacgtgctg accctgctcg gcagcctcaa cccggtcgac
     3541 gacgactggc tggcctgggg acgcgccgcg ttcgccggct tcagcaccct gcccggcccg
     3601 cgcactgcat tgctggttgg cgggcccacg ccgttggcac cgtgggacga accggcgatg
     3661 gtcggcgtat tccgcgccct ggccgagcag atccgcagcg agggaggcag cctgctggcc
     3721 accacctcgc ggcgcacgcc gccggccttg gccgagatcc tgcgcgcgac ctttgccgac
     3781 ctgccacacg tgatctgggg cgatggcggc gacggggtga atccatatgg cggcctgctc
     3841 ggctgggcca accgcgtggt ggtgtcgccc gattcggtga acctgctctc tgaagcctgc
     3901 gccacgcgca tgccggtgag ggtggcactg gccgataccg cacagggacg gctggcacgc
     3961 ttccagcagc agctgcgcga acgcgggcgg ttgcaggaac gctggctgga ctggcagtac
     4021 gaccgcatcg aaccgctgcg cgaaacggcg cggatcgccg ccgaggtgaa gcagcgcct
//
LOCUS       DAOKIP010000279         4073 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.283,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000279 DAOKIP010000000
VERSION     DAOKIP010000279.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 4073)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4073)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4073
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.283"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..424)
                     /locus_tag="QEL58_003724"
     CDS             complement(<1..424)
                     /locus_tag="QEL58_003724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ClpXP protease specificity-enhancing factor"
                     /protein_id="HDS1678150.1"
                     /translation="MTEDFFHMTSHRPYLLRALVEWINDNQLTPHILVDAGVPGVQVP
                     PSAVKDGRVVLNIAERAVVRLMIDNEMVSFSARFSGTSYPVQVPISAVLAVYARETGQ
                     GMALPDDIPGNETAPTSDELLHDEGTPPDDTPPASPPPK"
     gene            complement(509..1144)
                     /locus_tag="QEL58_003725"
     CDS             complement(509..1144)
                     /locus_tag="QEL58_003725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004152019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase N-terminal
                     domain-containing protein"
                     /protein_id="HDS1678151.1"
                     /translation="MAASVRMRNTLTLFSSNDDVLCHRVRLVLAAKGVTFDFVPVDPQ
                     NPPEDLIDLNPYHSVPTLVERELVLYAASVVSEYLDERYPHPPLMPVDPLSRARIRLA
                     MLRIEHDWVPQVQAIQLGNKTQAEAGRKRLKELLTASLPLFKASKFFLNPEMSLADCA
                     MAPIIWRLQSLDVPLPKDGKAIEDYGNRIFRHPGFVRSLTEQEKKLRDLPV"
     gene            complement(1279..2028)
                     /locus_tag="QEL58_003726"
     CDS             complement(1279..2028)
                     /locus_tag="QEL58_003726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c1"
                     /protein_id="HDS1678152.1"
                     /translation="MTERWMVRLALAATLMLGSFLASAAEGGTKLLQAGNDLGDRASL
                     QRGAQLYMNYCSGCHALKYLRYSRMAQDLGLTEEEVMNNLNFTGSAIGDPIPVAMPKE
                     NAEKWFGKMPPDLSLISRVRGSDWVYTYLKSFYLDSSRPLGWNNALFANASMPNPLWE
                     MQGLQHAVHGKPEAPGMDPPVTGLKIETPGSVDAGQYDQAVRDITNFLEYAGEPAALK
                     RQQLGVWVILFLALLTFLLYLLKKEYWKDVH"
     gene            complement(2021..3280)
                     /locus_tag="QEL58_003727"
     CDS             complement(2021..3280)
                     /locus_tag="QEL58_003727"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007965674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome bc complex cytochrome b subunit"
                     /protein_id="HDS1678153.1"
                     /translation="MANILSRTASGVADWVNARAPGLMPVYRKHVSEYYAPKNFNIWY
                     YFGSLALLVLVNQIVTGIFLTMHYKTNAAEAFGSIEYIMRDVEWGWLIRYMHSTGASL
                     FFIVVYLHMFRGLLYGSYQKPRELVWILGMLIYLVLMAEAFMGYVLPWGQMSFWGAKV
                     IISLFGAIPVIGNGLTEWIMGDYLPSDATLNRFFALHVIALPLVLLLLVVLHLGALHE
                     VGSNNPDGVEIKKGPKGNRWSPNAPADGIPFHPYYTLKDGVGAGFLLIIAAFIIFFAP
                     GFGGLFLEHDNFTEANRLVTPEHIKPVWYYTPYYAMLRVVPNKLGGVLVMFSAIAILF
                     LVPWLDKARVKSVRYRGWISKVMLGVLAVCFVWLGVIGSGPGTDVHETYIGRVLTFLY
                     FAFFITMPLWTRLDKTKPVPERVTTHD"
     gene            complement(3280..3900)
                     /gene="petA"
                     /locus_tag="QEL58_003728"
     CDS             complement(3280..3900)
                     /gene="petA"
                     /locus_tag="QEL58_003728"
                     /EC_number="7.1.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010486121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinol-cytochrome c reductase iron-sulfur
                     subunit"
                     /protein_id="HDS1678154.1"
                     /translation="MANDGVHDPVNTGRRRFLSATTAVVGAVGVGFTAVPFIKSWNPS
                     ARAKLAGAPVVADISALQEGQRLIVEWRGQPIWIVKRSKAILDALHGLDGRLKDPESG
                     EKDQQPDYVLKQNPELRSIKPDISVLVGLCTHLGCSPEMVAEIRPEPYDPQWKGGYFC
                     PCHKSRFDMSGRVFKDVPAPINLKVPAHHYQDDNTIIIGVDPQGAA"
BASE COUNT          741 a         1291 c         1333 g          708 t
ORIGIN      
        1 ccttgggcgg cgggctggcc ggcggcgtat cgtccggcgg cgtaccttcg tcatgcagca
       61 gttcatcgct ggtcggcgcg gtctcgttgc ccgggatgtc gtccggcagc gccatgccct
      121 gcccggtctc gcgggcgtag acggccagca cggcgctgat aggcacctgc accggatagc
      181 tggtgccgga gaagcgcgcc gagaagctca ccatctcgtt gtcgatcatc aaccgcacga
      241 cggcacgttc ggcgatgttg agcaccaccc ggccatcctt gaccgccgaa ggcgggacct
      301 gcacgccggg gacgccggcg tcgaccagga tgtgcggggt cagctggttg tcgttgatcc
      361 attccaccag cgcccgcagc aggtacgggc ggtggctggt catgtggaag aagtcttcgg
      421 tcatgcgtga agtgtacgcg cccggcgccc cgccggggcg gatcgcctgc acaccggtcg
      481 gcgtgcagac gggtaaggca tggccggatc agaccggcag atcgcgcagc ttcttttcct
      541 gctcggtcag gctgcggacg aaacccgggt ggcggaagat gcggttgccg tagtcctcga
      601 tcgccttccc gtccttgggc agcggcacgt ccagtgactg caggcgccag atgatcggtg
      661 ccatcgcgca gtcggccagg ctcatttccg gattgaggaa gaacttgctg gccttgaaca
      721 gcggcaacga cgcagtcagc agttccttca ggcgcttgcg accggcctcg gcctgggtct
      781 tgttgcccag ctggatggcc tgcacctgcg gcacccagtc gtgctcgatg cgcagcatgg
      841 ccaggcggat gcgcgcgcgc gagagcggat cgaccggcat cagcggcgga tgcgggtagc
      901 gctcgtccag gtattcgctg accaccgacg cggcatacag caccagttcg cgctcgacca
      961 gggttggcac cgagtggtac ggattgaggt cgatcaggtc ttcaggcggg ttctgcggat
     1021 cgaccggaac gaagtcgaag gtgaccccct tggccgccag gaccaggcgt acacggtggc
     1081 acagcacatc gtcgttcgag gaaaacagcg tcagtgtatt gcgcatgcgt acgctcgccg
     1141 ccatcaaagg ctctcctacg acaggagacc gcctgccgca tcggcgccgc cagcaccgtg
     1201 ccagcggtcg actcctcccc gagtgtgcaa ccgaccatca caaaagccaa taggcccgtg
     1261 cgatggccgg ccgcagaatc agtgaacgtc cttccagtat tccttcttca gcaggtacaa
     1321 caggaaggtc agcagggcca ggaacaggat cacccacacg cccagctgct gccgcttcag
     1381 cgcggccggc tcgccggcgt attcgaggaa gttggtgatg tcgcgcacgg cctggtcgta
     1441 ctggccggca tcgaccgaac ccggtgtttc aatcttgagc ccggtcaccg gcgggtccat
     1501 gcccggcgcc tcgggcttgc cgtgcacggc atgctgcagg ccctgcatct cccacagcgg
     1561 gttgggcatg gacgcgttgg caaacagcgc gttgttccag cccagtggcc ggctgctgtc
     1621 caggtagaac gacttgaggt aggtgtagac ccagtcactg ccccgcacac gcgagatcag
     1681 gctgaggtcc ggcggcatct tgccgaacca tttctcggca ttctccttgg gcatcgccac
     1741 cggaatcggg tcgccgatcg ccgagccggt gaagttgagg ttgttcatca cctcttcctc
     1801 ggtcaggccc aggtcctgtg ccatccgcga atagcgcagg tacttcagcg cgtggcagcc
     1861 ggagcagtag ttcatgtaca gctgcgcgcc gcgctgcagc gatgcgcggt caccgaggtc
     1921 gttgccggcc tgcagcagct tggtgccgcc ttcggcggcg gaggccagga aactgcccag
     1981 catcagggtg gccgccaggg ccagccggac catccagcgc tcagtcatgc gtggtcaccc
     2041 tctccggtac cggcttggtc ttgtccaacc ttgtccatag cggcatggtg atgaagaacg
     2101 cgaagtacag gaaggtcagc acccgcccga tgtaggtctc gtgcacgtcg gtgccggggc
     2161 cggaaccgat cacacccagc cacacgaagc acaccgccag cacgcccagc atcaccttcg
     2221 agatccagcc gcggtagcgc accgacttca cccgcgcctt gtccagccat ggcaccagga
     2281 acaggatcgc gatggccgag aacatcacca gcacgccgcc cagcttgttc ggcaccacgc
     2341 gcaacatcgc gtagtacggc gtgtagtacc agaccggctt gatgtgttcc ggggtgacca
     2401 ggcggttggc ctcggtgaag ttgtcgtgct ccaggaacag gccgccgaaa ccgggcgcga
     2461 agaagatgat gaaggcagcg atgatcagca ggaagccggc gccgacgcca tccttgagcg
     2521 tgtaatacgg gtggaacgga atgccatcgg ccggcgcatt cggcgaccag cggttgccct
     2581 tcggaccctt cttgatctcc acgccatccg ggttgttcga acccacttcg tgcagcgcgc
     2641 ccagatgcag caccaccagc agcagcagca ccagcggcag ggcgatgacg tgcagcgcga
     2701 agaagcggtt gagcgtggcg tcgctgggca ggtagtcgcc catgatccat tcggtcaggc
     2761 cgttgccgat caccggtatc gcgccgaaca gcgagatgat caccttggcg ccccagaacg
     2821 acatctggcc ccacggcagc acgtagccca tgaaggcttc ggccatcagc accaggtaga
     2881 tcagcatgcc gaggatccac accagctcgc gcggtttctg gtaactgccg tacagcaggc
     2941 cgcggaacat gtgcaggtag accacgatga agaacagcga ggccccggtg gagtgcatgt
     3001 agcggatcaa ccagccccac tccacgtcac gcatgatgta ttcgatggag ccgaacgcct
     3061 cggcggcgtt ggtcttgtag tgcatcgtca ggaagatgcc ggtgacgatc tggttgacca
     3121 gcaccagcag cgccagcgaa ccgaagtagt accagatgtt gaagttcttc ggcgcgtagt
     3181 actcgctgac atgcttgcgg tagaccggca tcaggcccgg cgcgcgggca ttgacccagt
     3241 cggcgacgcc gctggcggta cggctgagga tattggccat caggcagccc cctgcggatc
     3301 gacaccgatg atgatggtgt tgtcgtcctg gtagtggtgc gcgggcacct tcaggttgat
     3361 gggcgccggc acgtccttga agacgcggcc ggacatgtcg aagcgcgact tgtggcaggg
     3421 gcagaagtac ccgcccttcc actgcgggtc gtagggctcg ggccggatct cggcgaccat
     3481 ttcaggcgag cagcccaggt gcgtgcacag gccgaccagc acggagatgt ccggcttgat
     3541 cgagcgcagc tcgggattct gcttcagcac gtagtccggc tgctggtcct tctcgccgga
     3601 ctcggggtcc ttgaggcggc catccagtcc gtgcagcgca tcgaggatcg ccttggaccg
     3661 cttgacgatc cagatcggct ggccgcgcca ttccacgatc aggcgttggc cttcctgcag
     3721 ggcgctgatg tcggccacca ccggtgcgcc ggcaagcttg gcgcgggcac tggggttcca
     3781 ggacttgatg aaaggaactg cggtgaatcc gacgccgacg gcgcccacca cggctgtggt
     3841 ggcagaaaga aaacgccgac gtccggtgtt gactggatcg tgtaccccat cgttggccat
     3901 ccggcactcc gatattgatt aggtagcttt aaggctgcca gcggatccgg tgggggccag
     3961 agccgcattg aatcttggac gagtgtagcg gaaccgtcgc gcgccacaca acgcactgca
     4021 acaatctttt gaaggcgtgc cgactgacag tcggcaccta ccgtttagag cgt
//
LOCUS       DAOKIP010000280         4032 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.284,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000280 DAOKIP010000000
VERSION     DAOKIP010000280.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 4032)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4032)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4032
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.284"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            128..499
                     /locus_tag="QEL58_003729"
     CDS             128..499
                     /locus_tag="QEL58_003729"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005412048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1678155.1"
                     /translation="MNLPLHFGLLGTLEAGAIALLVGLLVYFLWSRLCRLLHWSVGHA
                     IGWSCVISVVISTGIDAWKLFYMGIVRLESPLYARLFLSTIHDPNELGSRVVLEIAGA
                     LAGVALGWVMFSSRSLEKTVD"
     gene            732..1142
                     /locus_tag="QEL58_003730"
     CDS             732..1142
                     /locus_tag="QEL58_003730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008268692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EF-hand domain-containing protein"
                     /protein_id="HDS1678156.1"
                     /translation="MTIRNRKPLIALIVAAGSVLAIPAMAQSAKQQAAQAQNEAAQAQ
                     QAAAQAGQAADQATNAAAAASAQANGGGQTWASIDTDGNGTISKSEAQVNAGLAQVFD
                     QADTNKDGELSADEYKAYVAAQQAGAGAGAAQGR"
     gene            1238..1987
                     /locus_tag="QEL58_003731"
     CDS             1238..1987
                     /locus_tag="QEL58_003731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019336419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD hydrolase-like protein"
                     /protein_id="HDS1678157.1"
                     /translation="MNTPTPAPSRAIGLVGFDGDDTLWKSEDYYRKAEQDYLDLLSRY
                     VDVHDTQTARHLLEVQQRNLAVFGYGVKGMVLSMIEAAIDITGQRIDAKDIQRMLDIG
                     HDTLRHPVELIDGVRASVAAIAEQYPVVLITKGDLFHQEAKIKVANLRELFPRIEIVS
                     EKDPETYARVLAEFDLPMQRFVMVGNSLRSDIEPVVTLGGWGVHTPYAVTWAHETQHG
                     VADDEPRMVTADTAHDWPAALAAIEAKAAAA"
     gene            2019..2507
                     /locus_tag="QEL58_003732"
     CDS             2019..2507
                     /locus_tag="QEL58_003732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014645723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1678158.1"
                     /translation="MNVRLRALMLSLLLAPATVLAQQTAERSAAYTVETGDSWVDAQL
                     QDINHYAERYPDAFLDEVSRYAGVPRGYISALFSIHGWQAGDIYFACFWAKASGQTCR
                     DSVRAFSQNPEGGWEAVVKRMPRAPDNLHYRAVRHAIVASYQHWDRPITLDATLKRQL
                     KR"
     gene            2669..>4032
                     /locus_tag="QEL58_003733"
     CDS             2669..>4032
                     /locus_tag="QEL58_003733"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014645724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HDS1678159.1"
                     /translation="MSASFVSPDVIRRLFAQAMSRMYRTEVPLYGTLVELVERINAQV
                     LEQDPALAAQLQRNDERARLDEERHGAIRVGTVQELATLRRLFAVMGMFPVGYYDLSV
                     AGVPVHSTAFRPLTGAALAQNPFRVFTSLLRLELIEDEALRAESARILERRRIFTEGA
                     LALIDQAERDGGLSQADAERFVEEALETFRWHGDATVDLPTYHALNKAHRLVADVVSF
                     RGPHINHLTPRTLDIDAAQAAMIEHGMAAKAVIEGPPRRACPILLRQTSFKALEEAVH
                     FPDSEGGDAGTHTARFGEIEQRGLALTPKGRALYDQLLSQARDAGGEGSTGGDYGQRL
                     QAVFASFPDDHDTLRQEGLGYYRYQLTDAGRAAPERVADLPAEVLVATGLATADPIVY
                     EDFLPVSAAGIFQSNLGGEEQRAYAAHANREAFEQALGVAVNDEFEIYERLQAESLAA
                     LRTA"
BASE COUNT          676 a         1372 c         1339 g          645 t
ORIGIN      
        1 cgtcccgcca aaccgtcagc agtccagagc cgcattggct tcggccgttg cttgaagcct
       61 ccgcgggtgc agggcgcaac cctgccgata cccttacact gaccgccttc tcatccttgc
      121 ccacccgatg aaccttcccc tgcacttcgg cctgctcggc accctggaag ccggcgccat
      181 cgccctgctg gtcggcctgc tggtgtactt cctgtggtcg cgcctgtgcc ggctgctgca
      241 ctggtcggtg ggccatgcga tcggatggtc gtgcgtcatc tcggtggtga tctccaccgg
      301 catcgatgcg tggaagctgt tctacatggg catcgtgcgg ctggagtcgc cgctgtatgc
      361 gcgcctgttc ctgtccacca tccacgatcc gaacgaactg ggcagccgcg tggtgctgga
      421 aatcgccggt gcgctggccg gtgtcgcctt gggatgggtg atgttcagtt cgcggtcatt
      481 ggaaaaaacc gtcgactgac gcaggttttt cgttgcctgc cggttaaatc ctgctgcgct
      541 gaatgcgcag cttatgagcc gctcactccg ccctaaccag cgtgctaatg catgcgcgcg
      601 ggccagtggt taatcgtgcg tgttcacgca ggtcgcgccg caaaatcgat tcagaaacgc
      661 ggtggcaggg taggtgccgt gcggaaacaa cacgccgcgc aacaccaccc aatcggtagg
      721 agacacccct gatgactatt cgcaaccgca agcccctgat cgccctgatc gtcgccgccg
      781 gcagcgtgct ggccatcccg gcgatggccc agtcggccaa gcagcaggcc gcgcaggcgc
      841 agaatgaagc cgcgcaggcc cagcaggcgg cggcacaggc cgggcaggcg gctgaccagg
      901 ccaccaacgc ggccgcagcg gcctcggcac aggccaatgg cggtggccag acctgggcca
      961 gcatcgacac cgatggcaac ggcaccatca gcaagagcga ggcacaggtg aacgcgggcc
     1021 tcgcccaggt gttcgaccag gccgatacca acaaggacgg cgagctgagc gccgatgagt
     1081 acaaggccta cgtggccgcc cagcaggccg gcgcaggtgc cggcgcggcg cagggccgct
     1141 gatccacacc tgattcggga aaaccggtgc atggagaccc gggcggctac ggccgcccgg
     1201 gtttttcccg tctgtcgggc cgctgtatcc ttggcggatg aataccccca cgcctgcgcc
     1261 gtcgcgcgcc atcggcctgg ttggttttga cggtgatgac acgctgtgga agagcgagga
     1321 ctactaccgc aaggccgagc aggattacct ggacctgctg tcgcgctatg tcgacgtgca
     1381 cgacacccag accgcccgcc acctgctgga agtgcagcag cgcaacctgg ccgtgttcgg
     1441 ctatggcgtg aagggcatgg tgctgtcgat gatcgaagcg gccatcgaca tcaccggcca
     1501 gcgcatcgat gccaaggaca tccagcgcat gctggacatc ggccatgaca ccctgcgcca
     1561 cccggtcgag ctgatcgacg gcgtgcgcgc atcggtggcg gccattgccg aacagtaccc
     1621 ggtggtgctg atcaccaagg gcgatctgtt ccatcaggaa gccaagatca aggtggccaa
     1681 cctgcgcgag ctgttcccgc gcatcgagat cgtctcggag aaggacccgg aaacctacgc
     1741 gcgcgtgctg gccgagttcg acctgccgat gcagcgcttc gtgatggtgg gcaactcgct
     1801 gcgctcggat atcgagccgg tggtgaccct tggcggctgg ggcgtgcata ccccgtacgc
     1861 ggtgacctgg gcccacgaga cccagcacgg cgtggccgac gacgaaccgc gcatggtcac
     1921 cgccgatacc gcgcacgatt ggccggccgc gctggcggcg atcgaggcca aggcggcggc
     1981 ggcctgacag gggcgggcgg ctgcggcaga atcggggcat gaacgtccga ctgcgcgcac
     2041 tgatgctgtc cctgctgctg gcgccggcca ccgtgctggc ccagcagacc gccgagcgct
     2101 cggcggctta caccgtggaa accggtgaca gttgggtgga tgcccagctg caggacatca
     2161 accattacgc cgaacgctat cccgacgcct tcctcgacga agtatcgcgc tatgccggcg
     2221 tgccgcgcgg ctacatcagc gccttgttct ccatccacgg ctggcaggcc ggggatatct
     2281 atttcgcctg tttctgggcc aaggccagcg gccagacctg ccgcgacagc gtgcgcgcct
     2341 tcagccagaa cccggagggc ggctgggagg cggtggtcaa gcgcatgccg cgcgcgccgg
     2401 acaacctgca ttaccgagcg gtgcgccacg ccatcgtggc cagctaccag cactgggacc
     2461 ggccgatcac cctcgatgcc accctgaagc gccagctgaa gcggtagtgc cggtggccgg
     2521 caattcctgt actccaggca tccagaggtt gccggccagc ggccggcact accgatttcc
     2581 ttcatgttgc tctgcatatc gccgccgccg cgcgctccgg cgacaatacg gcttcgagct
     2641 gttccccgtt cccgtaatcg agtgactgat gagcgcctct ttcgtttcgc ctgatgtgat
     2701 ccgccgcctg ttcgcccagg ccatgtcccg catgtaccgc accgaagtgc cgctgtacgg
     2761 cacgctggtg gaactggtgg agcggatcaa cgcgcaggtg ctggagcagg acccggcgct
     2821 ggccgcgcag ctgcagcgca atgacgagcg cgcgcgcctg gacgaggagc gccacggcgc
     2881 gatccgcgtc ggcaccgtgc aggaactggc gacgctgcgc cgcctgttcg cggtgatggg
     2941 catgttcccg gtcggctatt acgacctgtc ggtggccggc gtgccggtgc actccaccgc
     3001 gttccggccg cttaccggtg ccgcgctggc gcagaacccg ttccgcgtgt tcacctcgct
     3061 gctgcgcctg gaactgatcg aagacgaagc gctgcgtgcc gaatcggcgc gcatcctcga
     3121 acgccgccgc atcttcaccg agggcgcgct ggcactgatc gaccaggccg agcgtgacgg
     3181 tggcctgtcg caggccgacg ccgaacgttt cgtcgaagag gcgctggaaa ccttccgctg
     3241 gcacggcgac gccaccgtcg acctgccgac ctaccacgcc ctcaacaagg cgcaccggct
     3301 ggtggccgac gtggtcagct tccgtggccc gcacatcaac cacctgaccc cgcgcacgct
     3361 ggatatcgac gcggcgcagg cggcgatgat cgagcacggc atggccgcca aggcggtaat
     3421 cgaaggcccg ccgcgccgtg cctgcccgat cctgctgcgc cagaccagct tcaaggcact
     3481 ggaagaagcg gtgcatttcc cggacagcga aggcggtgat gccggcacgc ataccgcgcg
     3541 cttcggcgag atcgagcagc gcgggcttgc gctgaccccg aaggggcgcg cgctgtacga
     3601 ccaactgctg tcgcaggcac gcgatgccgg tggcgaaggc agtaccggtg gcgactatgg
     3661 ccagcgcctg caggcggtgt tcgccagctt cccggatgac catgacacgc tgcgccagga
     3721 aggcctgggc tactaccgct accagctgac cgacgccggc cgcgccgcgc cggaacgcgt
     3781 ggccgatctg ccggccgaag tgctggtggc caccggcctg gccaccgccg acccgatcgt
     3841 ctacgaggat ttcctgccgg tcagcgctgc gggcatcttc cagtcgaacc tgggcggcga
     3901 agaacagcgc gcctatgccg cccacgccaa ccgcgaggcc ttcgagcagg cgctgggcgt
     3961 ggcggtgaat gacgagttcg agatctacga gcggctgcag gccgaatcgc tggcggcgct
     4021 gcgtaccgcg tg
//
LOCUS       DAOKIP010000281         4002 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.285,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000281 DAOKIP010000000
VERSION     DAOKIP010000281.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 4002)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4002)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4002
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.285"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(18..2114)
                     /locus_tag="QEL58_003734"
     CDS             complement(18..2114)
                     /locus_tag="QEL58_003734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014038540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S9 family peptidase"
                     /protein_id="HDS1678160.1"
                     /translation="MSRLASACLLAGMMTAASVGTAVAAEDTDRYAWLEDVTGDKPLS
                     WVKEQNAKSEARLAQTPAFKQMETSIREVLDSDAKIPGVQKIGDYYYNFWKDQQHERG
                     LWRRTTLAEYRKASPQWETVLDLDALNKAEGENWVWHGADCLRPDYSRCLIALSRGGA
                     DADVTREFDLANKTWIKDGFFRPESKGGLNWIDRDTVFVYTDFGAGTMTTSGYPRVAK
                     LWKRGTPMASASVVYEGKPEDMYIAAMHDDTPGFERNLVSRTLAFYNNEIYLRGDDGT
                     LTKIDAPNSAEKGLHKQWLTLELRDPWTVGGKTYASGSLLATRLDDFLAGKRDFEVLF
                     TPTATTSLASATWTKSHLVLNVLDDVKNRLSVLTPGADGWQTSRFVGAPAFGTLGVSA
                     VDSNDSDAVWLTATDYLTPTTLALAEIGQPPETLKTMPAFFDAKGKVIEQHFATSKDG
                     TRVPYFVVHDKAMKLDGSNPTLLYGYGGFEISLTPSYSGGMGRAWLEKGGVYVVANIR
                     GGGEYGPRWHQAALKQNRHKAYEDMAAVARDLVKRKITTAKHLGVQGGSNGGLLTGNM
                     LTQYPELFGAVVVQVPLLDMKRYSHLLAGASWMAEYGNPDTSDWEFIKTFSPYHLFDA
                     KKNYPPVLFTTSTRDDRVHPGHARKMAAKMIDAGKDVTYYENIEGGHGGAANNAQAAH
                     MSALAYSFLWERLGGK"
     gene            complement(2184..2510)
                     /locus_tag="QEL58_003735"
     CDS             complement(2184..2510)
                     /locus_tag="QEL58_003735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008264559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1678161.1"
                     /translation="MNVRTVRRPATERVIFERADPRLLRGVQQVALAGVALVLVWPAA
                     RGSSAWLGWLPMWLVGMPLVAWWALLRFPLPRLSWLRLARRTGGQARRRPASAARGRR
                     RPVATA"
     gene            2638..3234
                     /locus_tag="QEL58_003736"
     CDS             2638..3234
                     /locus_tag="QEL58_003736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipocalin family protein"
                     /protein_id="HDS1678162.1"
                     /translation="MTSIRPFCAVLLALSLAGPAVAASEPPSSRATDAAALDAPIDLK
                     RFMGTWYVIGRVPNFIERGHVASVNEYELRDTHKVGITYRYRDGFGEPVQEVRARASV
                     DPDSGNHGWRTWFYRVVPTHSRVLEVAPDYSWALIGYPGREMAWIFARKPDMDKALYK
                     ELAERLRDEYGVNTDKLKRVPQHPDQVGKLGYEVPNVR"
     gene            complement(3274..3573)
                     /locus_tag="QEL58_003737"
     CDS             complement(3274..3573)
                     /locus_tag="QEL58_003737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019183666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HigA family addiction module antidote protein"
                     /protein_id="HDS1678163.1"
                     /translation="MKRPHNGMRAIHPGEILREEFLLPLALSVNALAKALDVPATRLH
                     AIVHGQRSISADTAARLARHFGGDAASWLAMQAAYDLKTLPTRSEIERRVQPRAA"
     gene            complement(3584..3862)
                     /locus_tag="QEL58_003738"
     CDS             complement(3584..3862)
                     /locus_tag="QEL58_003738"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010952670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HDS1678164.1"
                     /translation="MIRSFRCKQTRALFEGTCPRAWRPIRRVAERKLQLLDSAQTLAF
                     LRSPPGNRLEALSGDRRGQYSLRINDQWRLCFTWTDSGADAVEIVDYH"
BASE COUNT          642 a         1335 c         1322 g          703 t
ORIGIN      
        1 ggcgttttcc gttctgctta cttgccgccc aaccgctccc acaggaagct gtaggccagc
       61 gccgacatat gcgctgcctg cgcattgttg gctgcgccgc cgtgaccgcc ttcgatgttc
      121 tcgtagtagg tcacgtcctt gccggcgtcg atcatcttcg ccgccatctt gcgggcatgg
      181 cccgggtgca cgcggtcatc gcgggtggag gtggtgaaca gtaccggcgg gtagttcttc
      241 ttcgcgtcga acaggtggta cggcgagaag gtcttgatga actcccagtc gctggtgtcc
      301 gggttgccgt actcggccat ccacgaagca ccggccagca ggtggctgta gcgcttcatg
      361 tccagcagcg gaacctgcac caccaccgca ccgaacagtt ccgggtactg ggtcagcatg
      421 ttgccggtca gcaggccgcc gttgctgccg ccctgcacgc ccaggtgctt ggcggtggtg
      481 atcttgcgct tgaccaggtc acgcgccacc gcggccatgt cttcataggc cttgtggcgg
      541 ttctgcttca gcgccgcctg gtgccagcgc gggccgtact cgccaccgcc acggatgttg
      601 gcgaccacgt acacgccgcc cttctccagc caggcgcggc ccatgccacc ggagtagctc
      661 ggggtcagcg agatctcgaa gccaccgtag ccgtacagca gggtcggatt ggagccatcc
      721 agcttcatcg ccttgtcgtg caccacgaag tacggcacgc gggtgccgtc cttgctggtg
      781 gcgaagtgct gctcgatcac cttgcccttg gcatcgaaga aggccggcat ggtcttcaac
      841 gtttccggcg gctggccgat ctcggccagg gccagcgtgg tcggggtcag gtagtcggtg
      901 gcggtcagcc acaccgcgtc actgtcgttg ctgtccacgg cggacacgcc cagcgtgccg
      961 aaggccggcg caccgacgaa gcggctggtc tgccagccat cggcgcccgg agtcagcacc
     1021 gacaggcggt tcttgacgtc gtccagcacg ttcagcacca ggtggctctt ggtccaggtg
     1081 gcactggcca gcgaggtggt cgcggtcggg gtgaacagca cctcgaagtc acgcttgccg
     1141 gccaggaagt cgtccagccg ggtcgccagc agcgaaccgg acgcataggt cttgccaccc
     1201 acggtccacg gatcgcgcag ctccagggtc agccactgct tgtgcaggcc cttctcggcc
     1261 gagttcggcg cgtcgatctt ggtcagcgtg ccgtcgtcgc cacgcaggta gatctcgttg
     1321 ttgtagaacg ccagcgtgcg gctgaccagg ttgcgctcga agcccggggt gtcatcgtgc
     1381 atcgccgcga tgtacatgtc ttccggcttg ccttcgtaca ccacgctggc cgaggccatc
     1441 ggcgtgccgc gcttccacag cttggccacg cgcggatagc cggacgtggt catcgtgccg
     1501 gcaccgaagt cggtgtagac gaacacggtg tcgcggtcga tccagttcag gccacccttc
     1561 gactccggac ggaagaagcc gtccttgatc caggtcttgt tggccaggtc gaactcgcgg
     1621 gtgacgtcgg catcggcgcc gccgcgcgac agcgcgatca ggcagcggct gtagtccggg
     1681 cgcaggcagt cggcgccgtg ccagacccag ttctcgccct cggccttgtt cagcgcgtcc
     1741 aggtcgagca cggtctccca ctgcggcgag gccttgcggt actcggccag cgtggtgcgc
     1801 cgccacaggc cgcgctcgtg ctgctggtcc ttccagaagt tgtagtagta gtcgccgatc
     1861 ttctgcacgc cggggatctt ggcatcggag tcgagcacct cgcggatgct ggtctccatc
     1921 tgcttgaagg ccggggtctg cgccaggcgc gcctcggact tggcgttctg ttccttgacc
     1981 caggacagcg gcttgtcgcc ggtgacgtcc tccagccagg cgtagcgatc ggtgtcttca
     2041 gcggccacgg cggtccccac cgaggcagcg gtcatcatgc cggccagcag gcaggcggaa
     2101 gcgagtcgtg acattgcagc tccaggcagt cataagccgt ggaacgctag cacggaatgt
     2161 cgcggtcgcc cccgtgtcga aggtcaggcc gtggccaccg ggcggcgtcg accgcgcgca
     2221 gccgaagccg gacggcgccg cgcctgtcca ccggtacgac gtgccagccg cagccatgac
     2281 aggcgcggca gcgggaaacg cagcagtgcc caccacgcca ccagcggcat gccgaccagc
     2341 cacatcggca gccagcccag ccaggcgctg ctgccgcgtg cggccggcca gaccagcacc
     2401 agtgccacgc cggccagcgc cacctgctgc acgccgcgca gcaggcgtgg atcggcgcgc
     2461 tcgaagatga cgcgttcagt tgcagggcga cggacggtac gtacgttcat ggggcttctc
     2521 cggtggacaa tgcaacacag cgtgggcaag ggccttctca cggactgcga caccattgac
     2581 ggatcgcgtg cacacagtcg accatgcgcg tgcaagccca ctggagcccg ctcccgcatg
     2641 acttcgatcc gcccgttctg cgccgtgctg ctggccctgt cgctggcggg ccccgccgtg
     2701 gccgccagtg agccgccatc gtcccgcgcc accgacgcgg ccgctctgga cgcgccgatc
     2761 gacctgaagc gcttcatggg gacctggtac gtgatcggcc gcgtgccgaa cttcatcgaa
     2821 cgcgggcatg tcgccagcgt caacgaatac gagcttcgcg acacgcacaa ggtcggcatc
     2881 acctaccgct accgcgacgg cttcggtgaa ccggtgcagg aggtacgcgc acgcgccagt
     2941 gtcgatccgg acagcggcaa ccacggctgg cgtacctggt tctaccgtgt cgtgccgacc
     3001 cattcgcgcg tgctggaagt ggccccggac tattcctggg cgctgatcgg ttacccgggc
     3061 cgcgagatgg cctggatctt cgcgcgcaag ccggacatgg acaaggccct gtacaaggag
     3121 ctggccgagc gcctgcgcga cgagtacggc gtgaataccg acaagctcaa gcgcgtgccg
     3181 cagcatcccg accaggtcgg caagctgggc tacgaagtac cgaacgtgcg ctgatcggat
     3241 cgtggctgcg gagccgggtc cgtgcgaccg gcttcacgcc gcgcgtggct gcacccggcg
     3301 ttcgatttcg ctgcgtgttg gcaaggtctt cagatcgtag gccgcctgca tcgcgagcca
     3361 ggacgcggca tccccaccga aatgccgcgc cagccgcgcc gctgtatccg ccgaaatgct
     3421 gcgttggccg tgcacgatgg cgtgcagtcg cgttgcgggc acatccaagg ccttcgccag
     3481 cgcattcacg ctcagcgcca ggggcagcag gaactcttcg cgcaggatct cgccaggatg
     3541 gatggcgcgc atgccgttgt ggggacgctt catggcgggc acctcagtga tagtcaacaa
     3601 tttccacggc gtcggcgccg ctgtcggtcc aggtaaagca gagccgccac tgatcgttga
     3661 tacgaaggct gtattgccct ctccgatcgc ctgacagcgc ctccaggcgg ttcccgggcg
     3721 ggctgcgaag gaaggccaac gtctgtgccg aatcgagcag ttgcaatttg cgttctgcca
     3781 cgcgccggat tggacgccag gcacgggggc aggttccttc aaacagggcg cgggtctgct
     3841 tgcagcggaa tgaacggatc attccgttca acgtattacg ttgaacggaa cataccaagg
     3901 aaggcgctgt gctgccagtc ccagtctggc gatatcgatt cctgatgggc gtggcggctt
     3961 ccagagtccc gcgctatgac aagcccaata tcgacgttct gc
//
LOCUS       DAOKIP010000282         3992 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.286,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000282 DAOKIP010000000
VERSION     DAOKIP010000282.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 3992)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3992)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3992
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.286"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            125..502
                     /locus_tag="QEL58_003739"
     CDS             125..502
                     /locus_tag="QEL58_003739"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005418474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CopL family metal-binding regulatory protein"
                     /protein_id="HDS1678165.1"
                     /translation="MSLASTLLRVVLMLSLLLNGLNAAMASGHEDMGRMAHAVAAEDG
                     EADCHHHAGMQAEQAPQAKAPAHDAHCQIKDCVRSCAQHPLLVVQPLPYLAGPALSLA
                     PQPMPANGRPAPPLPPISRPPIG"
     gene            578..2401
                     /locus_tag="QEL58_003740"
     CDS             578..2401
                     /locus_tag="QEL58_003740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012481059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper resistance system multicopper oxidase"
                     /protein_id="HDS1678166.1"
                     /translation="MNTRIPPGPGAVPMPSRRLFVQGLAAGGVVAGIAAVGVPQRALA
                     AATSTPRLAGAPAVLSDTRVELSIGESLANFTGRTRPAITVNGSLPAPILRWREGQSV
                     DLFVRNTLQRHPTSIHWHGILLPANMDGVPGLSFNGIGPGETYHYHFDLKQSGTYWYH
                     SHSMFQEQAGLYGALIIDPAEPAPYHHDREHVILLSDWTDMDPGALFRRMKKLAEHDN
                     YYKRTLPDFLRDVKRDGWSAALSDRGMWGRMRMTPTDISDINAHTYTYLMNGTAPAGN
                     WTGLFRSGEKVLLRFINGASMTYFDVRIPGLKMTVVAADGQYIHPVSIDEFRIAPAET
                     YDVLVEPTGQDAFTLFCQDMGRTGFAAGTLAVRHGLQAPIPARDPRPLLTMSDMGHDM
                     AGHDMGGHAGHDMAAMKSMEGGCGASMGHGAHGGGSDAASKAPKHPASERNNPLVDMQ
                     SSATEPKLDDPGIGLRDNGRQVLTYGAMRSLFEDPDGREPGREIELHLTGHMEKFSWS
                     FDGIPFASAEPLRLNYGERMRIVLVNDTMMQHPIHLHGVWSDLEDAQGQFQVRKHTID
                     MPPGTRRSYRVRADALGRWAYHCHLLYHMEAGMMREVRIEE"
     gene            2398..3393
                     /locus_tag="QEL58_003741"
     CDS             2398..3393
                     /locus_tag="QEL58_003741"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012481060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper resistance protein B"
                     /protein_id="HDS1678167.1"
                     /translation="MSRTLLSPSLLALGLAAALPVFAQSHAGHDMAAMDAPAKATTTP
                     AEQVDHSKMDHSKMDHGTTQPATMDHSSMDHSSMDHSSMDHAAMGHGSPAPTEPREPI
                     PVPTDADRAAAFPPIAHGAMEHAPEINSLLLIDRLEHWDGKSSNGQAWEATGWIGGNI
                     NRLWLRTDGERSRGRTESSSLEALYGRSVSPWWDVLIGVRQDFRPADSRTWAALGIQG
                     LAPYKFESSATLYMGSGGQVLAKAEVEYDVLLTNRLILQPLLEATVAAKDEPEYGIGR
                     GLNKVEAGLRLRYEFNRRFAPYIGISHERTFGDTADYAGDHARDTRWVAGVRMWF"
     gene            3475..3987
                     /locus_tag="QEL58_003742"
     CDS             3475..3987
                     /locus_tag="QEL58_003742"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDS1678168.1"
                     /translation="MSLQIRRATLSDVEALSAIAITTYNETWGDSYPPQELRDFLQAH
                     YSSEPQRAELSDPRSAVWLLMDGDNVVGYLAAGANTLPHAEAREGDIELKRFYILADY
                     QNGGHGARLMDAFMAWLDHPQRRPLWVGVWEENFGAQRFYARYGCSKVGEYEFIVGET
                     HDREFILRRP"
BASE COUNT          709 a         1419 c         1261 g          603 t
ORIGIN      
        1 attccacgcc aggagcagtc gagcaagctc gacgctacaa atcccaccct ggtgctgctc
       61 caaccttgaa ccggctgttc agccggaagt gcatccgcgc ccgcttgcgg ctaaattggc
      121 gtccatgtcc ctggcctcga ccctgctccg tgtcgtgctc atgctcagcc tgttgctcaa
      181 cgggctgaac gcggccatgg ccagtggtca cgaggacatg ggccggatgg cccatgcagt
      241 ggccgccgaa gacggcgagg ccgactgcca ccaccacgcc ggcatgcagg ccgaacaggc
      301 tccgcaggcc aaggcccccg cccacgacgc ccattgccag atcaaggact gcgtgcgcag
      361 ctgcgcgcag cacccgttgc tggtggtgca acccctgccg tacctggccg gcccggcatt
      421 gtcgctggca ccgcaaccga tgccggccaa tggccgcccg gcgccgccac tgccgccgat
      481 ctcgcgtcct cccatcggct gattccacgc gtaccgtgcg cgctgcgcac cagagccggc
      541 tgtttgccgg catctatccg tgtctggagt caccaccatg aatacccgca ttccccccgg
      601 cccgggcgct gtgcccatgc cgtcgcgccg cctgttcgta cagggcctgg ccgccggtgg
      661 cgtcgtcgcc ggcattgccg ccgtcggcgt gccgcagcgc gcgctcgccg ccgccacgtc
      721 cacgccgcgc ctggccggcg cccccgccgt gctcagcgac acccgcgtcg agctgtccat
      781 cggcgaatcg ctggccaact tcaccggccg cacccgcccg gcgatcaccg tcaacggctc
      841 gctgccggca ccgatcctgc gctggcgcga aggccagagc gtggacctgt tcgtgcgcaa
      901 cacgctgcag cgccacccga cctcgatcca ctggcacggc atcctgctgc cggccaacat
      961 ggacggcgtg cccggcctga gcttcaacgg catcggtccc ggcgagacct accactatca
     1021 tttcgacctc aagcagtcgg gcacctactg gtaccacagc cactcgatgt tccaggagca
     1081 ggccggcctg tacggcgcgc tgatcatcga cccggccgag ccggcaccgt accaccacga
     1141 ccgcgagcac gtgatcctgc tgtcggactg gaccgacatg gacccgggtg cgttgttccg
     1201 gcgcatgaag aagctcgccg agcacgacaa ctactacaag cgcacgctgc cggacttcct
     1261 gcgcgacgtg aaacgcgacg gctggtcggc cgcactgtcc gaccgtggca tgtgggggcg
     1321 gatgcgaatg accccgaccg acatctccga catcaacgcg cacacctaca cctacctgat
     1381 gaacggtacc gcgccggccg gcaactggac cgggctgttc cgcagcggcg agaaggtact
     1441 gctgcgcttc atcaacggcg cctcgatgac ctacttcgac gtgcgcatcc ccggcctgaa
     1501 gatgaccgtg gtcgccgccg acggccagta catccatccg gtgagcatcg acgagttccg
     1561 catcgcaccg gccgagacct atgacgtact ggtggagccc actggccagg atgcgttcac
     1621 ccttttctgc caggacatgg gccgcaccgg ctttgccgcc ggcacgctgg cggtgcggca
     1681 tggcctgcag gcaccgattc cggcgcgcga cccgcgcccg ttgctgacga tgtccgacat
     1741 ggggcacgac atggcagggc atgacatggg cggccacgct ggccacgaca tggccgcgat
     1801 gaaaagcatg gaaggcggct gcggtgccag catgggccac ggcgcacatg gcggtggcag
     1861 cgatgccgcc agcaaggcac cgaagcaccc ggccagcgaa cgcaacaacc cgctggtgga
     1921 catgcagagc tcagccaccg aacccaaact ggacgacccg ggtatcggcc tgcgcgacaa
     1981 cggccgccag gtgttgacct acggagcgat gcgcagcctg ttcgaggacc cggatgggcg
     2041 tgaaccgggc cgcgagatcg agctgcacct gaccggccac atggagaaat tctcctggtc
     2101 gttcgatggc atcccgttcg ccagcgccga gccgctgcgg ctgaactacg gcgaacgcat
     2161 gcgcatcgtg ctggtcaacg acaccatgat gcagcacccg atccacctgc acggcgtgtg
     2221 gagcgacctg gaagacgcac agggccaatt ccaggtgcgc aagcacacca tcgacatgcc
     2281 gccgggcacc cgccgcagct atcgcgtgcg cgccgacgca ctcggtcgct gggcttacca
     2341 ctgtcacctg ctgtaccaca tggaagcagg catgatgcgc gaagtgagga tcgaagaatg
     2401 agccgcacac tgctttcccc cagcctgctg gccctgggcc tggcggctgc acttccggtg
     2461 ttcgcgcagt cgcatgccgg gcatgacatg gccgcgatgg acgcgcctgc gaaagccacg
     2521 acaacgccag ccgagcaggt cgatcattcg aagatggatc actcgaagat ggatcacggt
     2581 acgacgcagc cggcgacgat ggatcattcc tcgatggatc attcctcgat ggatcattcc
     2641 tcgatggacc acgccgcgat gggccacgga tcgcctgcac cgaccgagcc acgcgagccg
     2701 atcccggtcc cgaccgacgc cgaccgcgcc gccgccttcc cgccgatcgc acatggcgcg
     2761 atggaacatg cgccggagat caacagcctg ctgctgatcg accgtcttga acactgggat
     2821 ggcaagagca gcaacggcca ggcctgggag gcgaccggtt ggatcggcgg caacatcaac
     2881 cgcctgtggc tgcgcaccga tggcgaacgc agccgtggcc gcaccgagtc gtcatcgctg
     2941 gaagccctat acggccgcag tgtgtcgccc tggtgggacg tgctgatcgg cgtgcgccag
     3001 gacttccggc cggccgattc gcgtacctgg gccgcgctcg gcatccaggg cctggcccct
     3061 tacaagttcg aaagctcggc cacgctgtac atgggttccg gcggccaggt actggccaag
     3121 gccgaagtcg agtacgacgt gctgctgacc aatcgcctga tcctgcagcc gttgctggaa
     3181 gccaccgtgg cggccaagga cgaaccggag tacggcatcg gccgcggcct gaacaaggtg
     3241 gaagccggcc tgcgcctgcg ctacgagttc aaccgccgct tcgcgccgta catcggcatc
     3301 agccacgaac gcacgtttgg cgacaccgcc gattacgccg gtgaccacgc gcgcgacacg
     3361 cgctgggtgg ccggcgtgcg catgtggttc tgagcagcgg agtgtgagca accgccagcc
     3421 ccggcaggcg ccggggccgg ctacactgcg ccacgttcca atgcaggccc caccatgtcg
     3481 ttgcagatcc gccgcgccac cctgtccgat gtcgaagcgc tgtcggccat cgccatcacc
     3541 acctacaacg agacttgggg tgactcgtac ccgccgcagg aactgcgcga tttcctgcag
     3601 gcgcactaca gcagcgaacc gcagcgcgcc gagctgtccg acccacgcag tgcggtctgg
     3661 ctgctgatgg atggcgacaa cgtggtcggc tacctggcag cgggtgccaa caccctgccg
     3721 catgccgagg cacgcgaggg cgacattgaa ctgaagcgtt tctacatcct ggccgactac
     3781 cagaacggcg gtcatggcgc gcgcctgatg gacgcgttca tggcgtggct ggaccacccc
     3841 cagcgccgcc ccctgtgggt gggcgtgtgg gaagagaact tcggcgcgca gcgcttctac
     3901 gcacgctatg gctgcagcaa ggtgggcgag tatgaattta tcgtcggcga gacccacgac
     3961 cgcgagttca tcctgcgccg gccgtgatca cg
//
LOCUS       DAOKIP010000283         3985 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.287,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000283 DAOKIP010000000
VERSION     DAOKIP010000283.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 3985)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3985)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3985
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.287"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(4..1653)
                     /locus_tag="QEL58_003743"
     CDS             complement(4..1653)
                     /locus_tag="QEL58_003743"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter"
                     /protein_id="HDS1678169.1"
                     /translation="MHTIEVVLAMLVAVVASGYLVRVLPFSLPLPLVQIGLGAVIAGV
                     FNRGHALEPEVFFLLFLPPLLFLDGWRIPKQGLFRDKGAILELAFGLVVFTVIGAGFL
                     IHWLIPVMPLAVCFALAAIVSPTDPVAVGAIASKAPIPKRLMHILEGESLLNDASGLV
                     CFRFAVAAVMTGTFSLATASLTFVWVAVAGLAVGVAVTLGVSTFQRWLWRRFGEEPGA
                     AMLVNLLIPFAAYLLAEEIHASGILAAVAAGIAMSYVELTGRVSGSMRVQRAGVWNML
                     QFSFNGIMFVLLGEQLPGIVERATTTMNESGHQSAWWLLVYVVVINLALVVLRLLWVW
                     LSLRWNLLRARRRGLERGEAPNWRIVVATSVAGVRGAITLAGVLTLPLFLPDGSAFPA
                     RDLVIFLAASVILFSLLGASIALPQLLKGLQLPADSGERKEEDLARRLSSKAALAGVE
                     RMRQQMVMNQNTENVQLYNDAASRVSLLYQRHLEKDSDGPDVDPDKVRRMEQGYRQLR
                     SAGLNAEREELFRLTRRGVISDEISRRLIRNLDLLESRKRE"
     gene            complement(1771..2559)
                     /locus_tag="QEL58_003744"
     CDS             complement(1771..2559)
                     /locus_tag="QEL58_003744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dioxygenase"
                     /protein_id="HDS1678170.1"
                     /translation="MSRLPSLYISHGSPMTALHPGQVGVRLAELAQDLPTPRAIVMAS
                     AHWLGRQPLVGAHPQPPTIHDFGGFPRALFELQYPAPGDPALAEEVADRIAAAGLPVA
                     LDPQRGLDHGAWVPLRLLRPQADIPVVPVSIQPLLGPEHQFALGRALVPLREQGVLLV
                     GSGSITHNLHDWGDYQDGKEAPYVRPFIEWVEQRLAADDRQALFDYRRQAPFAERAHP
                     TDEHLLPLFFAMGAAGEGGFGAQRIDAGIDAGFLAMDLYRFDGA"
     gene            complement(2591..3001)
                     /locus_tag="QEL58_003745"
     CDS             complement(2591..3001)
                     /locus_tag="QEL58_003745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HDS1678171.1"
                     /translation="MHTTTAPVSPLAPYGATLLRLALGVLFLVHALTKLLVFTPAGTA
                     AFFESLGLPGVLGYLTIGVELVITAALLLGIYARWVGLVGVPLLLGTIVTVHGANGFG
                     FANAGGGWEYPAFWALALVVLFLVGDGKWTLRSR"
     gene            3098..3979
                     /locus_tag="QEL58_003746"
     CDS             3098..3979
                     /locus_tag="QEL58_003746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014035829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDS1678172.1"
                     /translation="MDTLEAMRVFVAVVERNGFSAAAQALDLSTAGVTRQVAALEKRL
                     STRLLHRTTRRVSPTSAGAAYYAQCVRLLAEFDALEASIGAQALEPSGTLRINAPVSW
                     GIARLGPLLASYRERFPQVELDLALSDRLVDMVEEGYDVAIRITREPGPTLIARRLGQ
                     SRVSLCAAPSYLAARGTPQTPQDLAAHACLSYSYWAAGDHWPLQGPGGEVKVAVSSLL
                     HANNGDVLREAAIAGMGVILQPDFLLEDALAEGRLVRVLPEWEASPIGIFAVYTSRSH
                     LAPKVRSFIDHLVEAGV"
BASE COUNT          711 a         1391 c         1358 g          525 t
ORIGIN      
        1 gggtcattcg cgcttgcgcg attccagcag gtccaggttg cggatcaggc gccgcgagat
       61 ttcgtcggag atcaccccgc gccgggtcag ccggaacagt tcctcgcgct cggcattgag
      121 gccggcgctg cgcagctggc gatagccctg ttccatgcgg cgtaccttgt ccgggtccac
      181 gtcggggccg tcactgtcct tttccaggtg ccgctggtac agcaggctca cccgcgaagc
      241 ggcgtcgttg tacagctgca cgttctcggt gttctggttc atcaccatct gctggcgcat
      301 gcgttcgacc ccggccagcg ccgccttcga cgacagccgg cgtgccaggt cctcttcctt
      361 gcgttcgccc gaatcggccg gcagctgcag gcccttcaac agctgcggca gcgcgatgct
      421 ggcgcccagc agcgagaaca ggatcaccga cgcggccagg aagatcacca ggtcgcgggc
      481 cgggaacgcg ctgccatcgg gcaggaacag cggcagggtc agcacaccgg ccagggtgat
      541 cgcaccgcgc acgccggcca ccgaggtcgc gaccacgatg cgccagttcg gcgcctcgcc
      601 ccgctccagg ccacggcggc gtgcgcgcag caggttccag cgcagcgaca gccacaccca
      661 cagcaggcgc agcacgacca gggccaggtt gatcaccacc acgtacacca gcagccacca
      721 tgcgctctgg tggccgctct cgttcatggt ggtggtggcg cgctcgacga tgcccggcag
      781 ctgctcgccc agcagcacga acatgatgcc gttgaagctg aactgcagca tgttccagac
      841 cccggcacgc tgcacgcgca tgctgccgga gacgcggccg gtcagctcca cgtagctcat
      901 cgcgataccg gcggcaaccg cggcgaggat gcccgacgca tggatttctt cggccagcag
      961 gtaggcggcg aaggggatca gcaggttgac cagcattgcc gcgcccggct cctcgccgaa
     1021 gcggcgccac agccagcgct ggaaggtcga tacgcccagg gtgaccgcca cgcccactgc
     1081 caggccggcc accgccaccc acacgaaggt cagcgaggcg gtggccagcg agaacgtgcc
     1141 ggtcatcacc gccgccaccg cgaagcggaa gcagaccagg ccggacgcat cgttgagcag
     1201 cgactcgcct tccaggatgt gcatcaggcg cttgggaatc ggcgccttgg aggcgatcgc
     1261 accgaccgcc accggatcgg tgggcgacac gatcgccgcc agcgcgaagc acaccgccag
     1321 cggcatcacc gggatcagcc agtggatcag gaacccggcg ccgatgacgg tgaacaccac
     1381 caggccgaag gccagttcga ggatcgcgcc cttgtcgcgg aacaggccct gcttgggaat
     1441 gcgccagcca tcgaggaaca gcagcggcgg caggaacagc aggaagaaca cttccggctc
     1501 cagcgcgtgg ccgcggttga acaccccggc gatcaccgcg cccaggccga tctgcaccag
     1561 tggcagcggc aacgagaacg gcaggacacg aaccaggtag ccgctggcaa caacggccac
     1621 cagcatcgcc aggacgactt caatggtatg catgcttctt ccaggaagcg gcgcgcgggg
     1681 aggctcggga gccagcgccg gaaacccggg aaaaactacc acacgccgcc gcggccgcga
     1741 ccaacgcggc cgtcgcgcgt cagccccggc tcatgccccg tcgaagcgat acaggtccat
     1801 ggccaggaat ccggcatcga taccagcatc gatgcgctgg gcaccgaagc cgccctcgcc
     1861 cgccgcgccc atcgcgaaga acagcggcaa caggtgctcg tcggtcgggt gcgcgcgttc
     1921 ggcgaacggc gcctgcctgc ggtagtcgaa cagggcctgg cgatcatcgg cggccaggcg
     1981 ctgttccacc cactcgatga agggccgcac gtacggcgct tccttgccgt cctggtagtc
     2041 gccccagtcg tgcaggttgt gggtaatgct gcccgagccg accagcagca cgccctgctc
     2101 gcgcagcggc accagcgcgc ggcccagcgc gaactggtgc tcggggccga gcagcggctg
     2161 gatcgacacc ggcaccaccg ggatgtcggc ctgcgggcgc agcaagcgca gcggcaccca
     2221 cgcgccgtga tcgaggccgc gctgcgggtc gagggccacc ggcaggccgg cggcggcgat
     2281 gcggtcggcc acctcttcgg ccagcgccgg atcacccggc gccgggtact gcagttcaaa
     2341 caacgcgcgc gggaagccac cgaagtcgtg gatcgtaggc ggctgcggat gcgcaccgac
     2401 cagcggctgc cggcccagcc agtgcgccga ggccatcacg atggcgcgcg gcgtcggcag
     2461 gtcctgcgcc agctcggcca ggcgcacgcc gacctggccc ggatgcaggg cagtcatcgg
     2521 cgaaccatgc gagatgtaca acgaaggcag gcgggacatg gaattctcca gttgcagggt
     2581 caggcggcga tcagcgcgaa cgcagggtcc acttgccatc gccgaccagg aacagcacca
     2641 ccagcgccag cgcccagaac gccgggtatt cccagccgcc gccggcattg gcgaaaccga
     2701 agccattggc gccgtgcacg gtgacgatgg tgcccagcag cagcggcacg ccgaccaggc
     2761 cgacccagcg cgcgtagatg cccagcagca gcgcggcagt gatcaccagt tcgacgccga
     2821 tggtgaggta accgagcacg ccgggcaggc ccagcgactc aaagaacgcc gccgtaccgg
     2881 ccggggtgaa caccagcagc ttggtcagcg catggaccag gaacagcacg cccagggcca
     2941 ggcgcagcag ggtggcgccg tacggggcca gcggcgaaac aggagcggtc gtggtgtgca
     3001 tcggaaagca ccttgaaggg agtaggcaca ggttattgcg ccttcacgga ctgataaata
     3061 cgatcgtttg accgtattta tttcaaaagg cgcaacaatg gacacccttg aggcgatgcg
     3121 cgtgttcgtg gccgtggtcg agcgcaatgg cttcagtgcc gccgcccagg cgctggacct
     3181 gtccaccgcc ggggtgaccc gccaggtcgc cgcgctggag aagcgcctat ccacccgcct
     3241 gctccaccgc accacgcgcc gggtcagccc gaccagtgcc ggcgcggcct attacgccca
     3301 gtgcgtgcgc ctgctggccg aattcgatgc gctggaagcc agcatcggcg cgcaggcgct
     3361 ggaaccgtcg ggcacgctgc gcatcaacgc accggtcagc tggggcatcg cccgcctcgg
     3421 gcccttgctg gccagctacc gcgaacgctt cccgcaggtg gagctggacc tggccctgtc
     3481 cgaccggctg gtggacatgg tcgaggaagg ctacgacgtg gccatccgca tcacccgcga
     3541 gcctggcccg acgctgatcg cgcgtcgcct cggccaatcg cgggtgagcc tgtgtgccgc
     3601 accgtcctac ctggccgcgc gtggcacgcc gcagaccccg caggatctgg cggcacacgc
     3661 gtgcctgagc tacagctact gggccgctgg cgatcactgg ccgctgcagg ggcccggcgg
     3721 cgaagtgaag gtggcggtga gcagcctgct gcacgccaac aacggcgatg tgctgcgcga
     3781 agcggcgatt gccggcatgg gcgtgatcct gcagccggac ttcctgctgg aagatgcgct
     3841 ggccgagggc cgcctggtgc gcgtgctacc ggagtgggag gcctcgccga tcggcatttt
     3901 cgcggtctac accagccgca gccacctggc accgaaggta cgcagcttca tcgaccacct
     3961 ggtggaggcc ggggtgtagc cgagt
//
LOCUS       DAOKIP010000284         3985 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.288,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000284 DAOKIP010000000
VERSION     DAOKIP010000284.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 3985)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3985)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3985
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.288"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(50..832)
                     /gene="ppk2"
                     /locus_tag="QEL58_003747"
     CDS             complement(50..832)
                     /gene="ppk2"
                     /locus_tag="QEL58_003747"
                     /EC_number="2.7.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008264955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyphosphate kinase 2"
                     /protein_id="HDS1678173.1"
                     /translation="MAKLKRKEYDELLLPLQLELTAMARWVQHSGQRLLVLFEGRDTA
                     GKGGAIQAISQHLNPRQCRVVALPKPTDREATQWYFQRYASHLPAAGEIVLMDRSWYN
                     RAGVERVMGYCSETEYQQFLRQAPVFEQLLVDDGILLFKYWLCVDQEQQEKRFAERHI
                     DPLKGWKLSPVDLKSRSKYSAYTEAREAMLRATHREGAPWTLVDFNDQRLGRLTLVRN
                     LLDRLPDTRVDAPLPELPKLKGKLHREHYDVLKPIEDFPVEE"
     gene            complement(879..2585)
                     /locus_tag="QEL58_003748"
     CDS             complement(879..2585)
                     /locus_tag="QEL58_003748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014646029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HDS1678174.1"
                     /translation="MSAWQQRQHLQQAIARQPSDFVAWVMLADLELEAGDIAAGEQAA
                     RRALQLRPNHPEALARLGRVAWMAGAHADAATLLGQAAALAPQHPGIALWLGHALEDA
                     DDAEGAAAAYRRAHALMPSEPYIAAQRLAWQRRLCDWQDVDAMAAQVRSALASGQGVV
                     EPFAFLSEDASAAEQLACARARASAVAASVRPLPPVTVRTQGPLRVGFLSNGFGAHPT
                     GLLTVALFEQLRDDPALQLHLFALSRDDGSRIRQRLQVATQLHDVAGLRHADTATRIR
                     GQGIDLLFDLRGWGGGGTPEVLAMRPAPLQLNWLAYPGTSGAPWMDAVIGDDFTLPPS
                     LQPHYSERVLRLPRAFQPSDNTRVLESAPTRAECGLPERGVVFCCFNNSYKLNPRSMG
                     RAFAVLQAVPGSVLWLLSGPGQADARLRAAAQNAGLDPARLVFMAKLPHPQYLARYQL
                     ADLFLDTHPYNAHTTASDALWAGCPVLTCPGDTFAARVAGSLNHHLGLARMNVADDAA
                     FIATASALGNDPAALAALRAELAQAREHSGLFDMAGFARDLSALLQQFAGEHGWRGVD
                     RT"
     gene            complement(2591..3673)
                     /gene="prfA"
                     /locus_tag="QEL58_003749"
     CDS             complement(2591..3673)
                     /gene="prfA"
                     /locus_tag="QEL58_003749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 1"
                     /protein_id="HDS1678175.1"
                     /translation="MTPTLRRKLEALAERREELERLLAEPDVVADNTRFRDLSREFAQ
                     LEPVAAALADEARAKADLAAAEGMRADPDLRELADEEIAAAQTRLQQLEQELALLLVP
                     RDPRDEGNLFLEVRAGTGGDEAAIFAGDLFRMYARYAERQGWKVEIESDNPGEHGGYK
                     EVVARVVGRGAFSRLKFESGTHRVQRVPATESQGRIHTSAATVAIIPEADEVDDIVIN
                     PADLKVDTFRSSGAGGQHVNKTESAIRITHVPTGVVVECQTERSQHANRDKAMKRLKA
                     QLLDAERQRQDAAQAESRRLQVGSGDRSQRIRTYNFPQGRITDHRVEGLTLYDLPNIL
                     AGDLDPLLQRLSHEHQVDALAQLSAG"
     gene            complement(3651..>3985)
                     /locus_tag="QEL58_003750"
     CDS             complement(3651..>3985)
                     /locus_tag="QEL58_003750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006450610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glutamyl-tRNA reductase"
                     /protein_id="HDS1678176.1"
                     /translation="DLQVSRFIETQQASAHQAPLRQLRAFGEATRTELLERARQQLAN
                     GKPADEVLELLAHGLTNRLLHPPTAALRAAALSGDADLTRAAERLFPATPGYRHPPVR
                     PDDADPAP"
BASE COUNT          575 a         1324 c         1426 g          660 t
ORIGIN      
        1 ttgcttgaag gcttctgcag gtgcagggcg cagccctgcc gaacaaaccc tattcctcga
       61 ccgggaaatc ctcgatcggc ttcagcacat cgtagtgctc gcgatgcagc ttgcccttca
      121 gcttcggcag ttccggcaac ggcgcatcca cccgcgtgtc cggcaaccgg tccagcaggt
      181 tgcgcaccag ggtcagccgg cccagtcgct ggtcgttgaa atccaccagc gtccacggcg
      241 cgccttcgcg atgggtggcg cgcagcatcg cctcgcgcgc ttcggtgtag gcgctgtact
      301 tgctgcgtga cttcaggtcg accggcgaca gcttccagcc cttcagtgga tcgatgtggc
      361 gctcggcaaa gcgcttttcc tgctgctcct ggtccacaca cagccagtac ttgaacaaca
      421 ggatgccgtc gtccaccagc agctgttcaa acaccggcgc ctggcgcagg aactgctggt
      481 actcggtctc gctgcagtac cccatcaccc gctcgacgcc ggcgcggttg taccagctgc
      541 ggtccatcag cacgatctcg ccggcggcgg gaaggtgcga tgcataacgt tggaaatacc
      601 actgcgtggc ctcacggtcg gtgggcttgg gcaaggccac cacccggcac tggcgggggt
      661 tgagatgctg gctgatggcc tggatcgcgc cacccttgcc cgccgtatcc ctgccttcga
      721 acagcaccag caggcgttgg ccactgtgct gcacccagcg cgccatcgcg gtcagttcca
      781 gctgcagcgg cagcagcagt tcgtcgtact ccttgcgctt gagctttgcc atcgtcacac
      841 cacgcgggaa ggaagcccga gcgtagcgca ggtggtgctc aggttctgtc gacgccgcgc
      901 cagccgtgct caccggcgaa ctgctgcagc agcgctgaca ggtcgcgggc gaagccggcc
      961 atgtcgaaca ggccgctgtg ttcgcgtgcc tgcgccagct cggcgcgcag cgcggccagc
     1021 gccgccgggt cgttgcccaa cgcactggcg gtggcgatga acgctgcatc atcggcgacg
     1081 ttcatccggg ccaggccgag gtgatggttg aggctgccgg ccacccgcgc ggcgaaggtg
     1141 tcgccggggc aggtcagcac cgggcagccg gcccagagcg catcggaggc ggtggtgtgg
     1201 gcgttgtacg gatgcgtgtc gaggaacaga tcggccagct gatagcgggc caggtactgc
     1261 ggatgcggca acttggccat gaacaccagg cgtgccgggt ccaggcccgc gttctgcgca
     1321 gccgcccgca gccgtgcatc ggcctggccc gggccggaca gcagccacag cacgctgcca
     1381 ggcaccgcct gcagtacggc gaaggcgcgg cccatgctgc gcgggttgag cttgtagctg
     1441 ttgttgaagc agcagaacac cacgccgcgt tcgggcaggc cgcactcggc acgcgtcggt
     1501 gcggactcca gcacacgggt gttgtccgaa ggctggaagg cgcggggcag gcgcagcacg
     1561 cgttcgctgt agtgcggttg cagtgatggc ggaagggtga agtcatcacc gatcactgca
     1621 tccatccacg gcgctccgga cgtgcctgga taggccagcc agttcagctg cagcggggca
     1681 gggcgcatgg ccagcacctc cggcgtgccg ccaccacccc agccgcgcag gtcgaacaac
     1741 aggtcgatgc cctgcccgcg gatgcgggtg gccgtgtcgg catgacgcag gccggccacg
     1801 tcgtgcagtt gcgtcgccac ctgcagtcgt tggcggatgc ggctgccatc gtcgcggctc
     1861 agcgcgaaca gatgcagctg cagcgcaggg tcatcgcgca gctgctcgaa cagggccacg
     1921 gtcagcagcc cggtgggatg ggcgccgaat ccgttggaga gaaaaccaac ccgcagcggg
     1981 ccctgggtac gcaccgttac cggtggcagc ggtcgcaccg aagcggctac ggcggatgca
     2041 cgcgcgcgcg cacaggccag ctgctcggcg gcggaagcgt cttcgctgag gaaggcgaac
     2101 ggttcgacca cgccttgtcc ggaggcaagt gcactgcgca cctgtgcggc cattgcgtcc
     2161 acgtcctgcc agtcacacag gcgacgctgc caggccaggc gttgtgcggc gatgtacggc
     2221 tcggacggca tcagtgcgtg cgcgcgtcga tacgccgccg ccgcgccttc ggcatcatcg
     2281 gcatcttcca gcgcgtggcc cagccacagc gcgatgcccg ggtgctgcgg tgccagggcg
     2341 gcagcctggc caagcagcgt cgcggcgtcg gcatgcgcgc cggccatcca tgccacgcga
     2401 cccaggcgcg ccagcgcttc gggatggttc gggcgcagct gcagcgcgcg tcgtgcggcc
     2461 tgctcgccgg cggcgatgtc gccggcttcc agttccaggt cggccagcat cacccaggcg
     2521 acgaaatcgc tgggctggcg cgcgatcgcc tgttgcaggt gctgccgctg ctgccaggcg
     2581 gacatgcgac tcagcccgcc gacagctggg ccagggcgtc gacctggtgt tcgtggctga
     2641 gccgctgcag cagcgggtcg aggtcgccgg ccaggatgtt gggcaggtcg tacagggtca
     2701 ggccttccac gcggtggtcg gtgatccgcc cctgcgggaa gttgtaggta cggatgcgct
     2761 ggctgcggtc accactgccg acctgcaggc gccgcgactc ggcctgcgcc gcgtcctggc
     2821 gctggcgttc ggcgtcgagc agctgcgcct tcaggcgctt catcgccttg tcgcggttgg
     2881 cgtgctggct gcgttcggtc tggcattcca ccaccacgcc ggtcggcacg tgggtgatgc
     2941 ggatggccga ttcggtcttg ttgacgtgct ggccaccggc accggaggag cggaaggtgt
     3001 ccaccttcag gtcggccggg ttgatgacga tgtcatcgac ttcgtcggcc tcgggaatga
     3061 tcgccacggt ggcggccgag gtgtggatgc ggccctgcga ttcggtggcc ggtacgcgct
     3121 gcacgcggtg cgtgcccgat tcgaatttca ggcgcgagaa cgcaccacgg ccgaccacgc
     3181 gcgccaccac ttccttgtag ccgccgtgtt cacccgggtt gtccgattca atctcgacct
     3241 tccagccctg gcgctcggcg tagcgggcgt acatgcggaa caggtcgccg gcaaagatcg
     3301 ccgcttcgtc gccgccggtg ccagcgcgca cttccaggaa caggttgcct tcgtcgcgcg
     3361 ggtcgcgcgg taccagcagc agcgccagct cctgttccag ttgctgcagg cgcgtctgcg
     3421 cggcggcgat ttcctcgtcg gccagctcgc gcaggtcggg gtcggcgcgc atgccttcgg
     3481 cggcggccag gtcggccttg gcgcgggcct catcggcgag tgcggcagcg accggttcaa
     3541 gttgggcgaa ttcgcgcgaa aggtcgcgga aacgggtgtt gtcggcgacc acatcgggtt
     3601 cggcgagcag gcgttccagt tcttcgcggc gctcggccag cgcttccagc ttacggcgca
     3661 gggtcggcgt catcgggtct cacgggtggg tggcggtaac ccggcgtggc cgggaacagg
     3721 cgctcggcgg cgcgggtcag gtcggcatcg ccgctcagcg cggcggcgcg cagggcggcg
     3781 gtcggtggat gcagcaagcg gttggtcagg ccgtgggcca gcagttccag tacttcgtcg
     3841 gccggcttgc cgttggccag ctgctggcgg gcacgctcca gcagctcggt gcgggtggcc
     3901 tcgccgaatg cgcgcagctg ccgcagcggt gcctggtggg cgctggcctg ctgcgtctcg
     3961 atgaagcgcg atacctgcag gtcga
//
LOCUS       DAOKIP010000285         3907 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.289,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000285 DAOKIP010000000
VERSION     DAOKIP010000285.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 3907)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3907)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3907
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.289"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            317..1537
                     /locus_tag="QEL58_003751"
     CDS             317..1537
                     /locus_tag="QEL58_003751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellin"
                     /protein_id="HDS1678177.1"
                     /translation="MAQVINTNTMSLNAQRNLSTSGSSLATTIQRLSSGLRINSAKDD
                     AAGLAISERFTTQIRGLDVAIRNANDGISLAQVAEGSLSEVGNNLQRIRELAVQSSNA
                     TNSASDRKALQAEVTQLVSEVDRVAKQADFNGTKLLDGSFTSQLFQVGANAGQAIAIN
                     SVVNAKADSLGAASFANGYTGTSLAAADKATADTTYSGLQISVTPPGGTATTITVNDF
                     TVKAGESITSATSAAINNKLGETGVMASVNAGVISLASVKDGQTFTLGVSAATPPTGA
                     TAATIAGLGLTETSTNGGTLTGTSASFVKDLNVTTAEGAQKALSIVDKALESVNSVRA
                     DLGAIQNRFTSVVANLQTSSENLSASRSRIRDTDFAKETAELTRTQILQQAGTAMLAQ
                     ANQVPQNVLSLLQR"
     gene            1610..2785
                     /locus_tag="QEL58_003752"
     CDS             1610..2785
                     /locus_tag="QEL58_003752"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003112503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellin"
                     /protein_id="HDS1678178.1"
                     /translation="MAQVINTNTMSLNAQRNLSTSGSSLATTIQRLSSGSRINSAKDD
                     AAGLAISERFGTQIRGTDVAIRNANDGISLAQVAEGSLTEIGNNLQRVRELSVQASNA
                     TNSASDRKALQAEVTQLVSEIDRVAKQSDFNGTKLLDGTFSSQLFQVGANAGQAIAID
                     KTIDAKANALGGAQFSSGTATAIAGTADTDTAVGAFTITDSKGTVFNFGAMTVKSVGD
                     AAANTAANGKAVVAAINAKIGETGVLAETDAAGALTLTSVKDSVNNAGAFTAIGSSLA
                     GFAAATPVPGKQFADKIDVSTVKGAQQAMEVVDKALGAINSTRADLGAIQNRFTSVVA
                     NLQTSSENLSASRSRIKDTDFAKETAELTRTQILQQAGTAMLAQANQVPQGVLSLLR"
     gene            2871..>3907
                     /locus_tag="QEL58_003753"
     CDS             2871..>3907
                     /locus_tag="QEL58_003753"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014647055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellin"
                     /protein_id="HDS1678179.1"
                     /translation="MAQVINTNTMSLNAQRNLSTSGSSLATTIQRLSSGSRINSAKDD
                     AAGLAISERFGTQIRGTDVAIRNANDGISLAQVAEGSLTEIGNNLQRVRELSVQASNA
                     TNSASDRKALQAEVTQLVSEIDRVAKQSDFNGTKLLDGTFSSQLFQVGANAGQAIAID
                     KTIDAKAGSLGTSTFASGATDVLAASTDGSRITGKVMGVDIGTVEIKAGASTADASKA
                     VATAINAKIGEAGLYAEANADGSMKLTSVKEGKAVVAADIALERSDLNAGTGVWGAKN
                     AAAGYTAGTATAANVQKLDVSTVLGAQQAMEVVDKALGAINSTRADLGAIQNRFTSVV
                     ANLQTSSENLSA"
BASE COUNT          804 a         1426 c         1129 g          548 t
ORIGIN      
        1 gcgccatgcc cgctgcggcg gaatacccgt gattgcccat caaggccggc gctgccccgc
       61 cgataccttc atcagcgctg gtcgggcctg ccccgaccgc ccctttccgg gatcgccttc
      121 acgcccttcc agggctgaaa agcccgggaa aaacagcctc cagcagcgaa ttacggctcc
      181 agcggaattc acggctaaag gttgttgaca aagcgccgtt attcatttgg caacagcgaa
      241 gcacacagcc acacaaaaaa accggcggcg cttcgtttca ttcaccaacg ggttccatat
      301 aagaggagac gaccccatgg cacaggtaat caacaccaat acgatgtcgc tcaacgctca
      361 gcgcaacctg agcaccagcg gcagctcgct cgctaccacc atccagcgcc tctcgtccgg
      421 cctgcgcatc aacagcgcga aggacgacgc ggccggcctg gccatcagcg agcgcttcac
      481 cacccagatc cgtggtctgg acgtggccat ccgcaacgcc aacgacggca tctcgctggc
      541 ccaggtcgcc gaaggctcgc tgagcgaagt cggcaacaac ctgcagcgca tccgcgaact
      601 ggccgtccag tcctccaacg ccaccaactc ggccagcgac cgcaaggcgc tgcaggccga
      661 agtaacccag ctggtctccg aagtggaccg cgtcgccaag caggccgact tcaacggcac
      721 caagctgctg gacggctcct tcaccagcca gctgttccag gtcggtgcca acgctggcca
      781 ggccatcgcc atcaacagcg tggtcaacgc caaggccgat tcgctgggcg ccgcgtcctt
      841 cgccaacggc tacaccggca ccagcctggc agccgccgac aaggccaccg ccgacaccac
      901 ctactctggt ctgcagatct cggtgacccc gccgggcggc accgccacca cgatcaccgt
      961 caacgacttc accgtgaagg cgggcgagtc gatcacttcg gccacctccg ccgcgatcaa
     1021 caacaagctg ggcgaaaccg gcgtcatggc ctcggtcaat gccggcgtga tcagcctggc
     1081 ttcggtcaag gacggccaga ccttcaccct gggcgtcagc gccgcgaccc cgccgaccgg
     1141 cgccaccgcc gcgacgatcg ccggcctcgg cctgaccgag accagcacca atggcggcac
     1201 gctcaccggc acctcggcca gcttcgtcaa ggacctgaac gtcaccacgg ccgaaggcgc
     1261 gcagaaggcg ctgtcgatcg tcgacaaggc gctggaatcg gtcaacagcg tccgcgccga
     1321 cctcggcgcg atccagaacc gcttcacctc ggtggtagcc aacctgcaga cctcctcgga
     1381 gaacctgtcg gcctcgcgca gccgcatccg cgataccgac ttcgccaagg aaaccgccga
     1441 gctgacccgc acccagatcc tgcagcaggc cggtacggcc atgctggccc aggccaacca
     1501 ggtaccgcag aacgtgctca gcctgttgca gcgctgacat gagccgcccc cggggcacgt
     1561 cgggggcgtc taacccaact cacgtgcaac cgctcaagga cctctcctca tggcacaagt
     1621 catcaacacc aatacgatgt cgttgaatgc tcagcgtaac ctgagcacca gcggcagctc
     1681 gctggccacc accatccagc gcctgtcctc cggttcgcgc atcaacagcg ccaaggacga
     1741 cgccgccggt ctggcgatct ccgagcgctt cggcactcag atccgcggca ccgacgtcgc
     1801 catccgcaat gccaacgacg gtatctcgct ggcccaggtc gccgaaggtt cgctgaccga
     1861 aattggcaac aacctgcagc gcgtccgcga gctgtcggtg caggcgtcca acgccaccaa
     1921 ctcggccagc gaccgcaagg cgctgcaggc tgaagtgacc cagctggtct cggaaatcga
     1981 ccgcgtcgcc aagcagtcgg acttcaacgg caccaagctg ctggacggca cgttctccag
     2041 ccagctgttc caggtcggcg ccaatgccgg ccaggccatc gccatcgaca agaccatcga
     2101 tgccaaggcc aacgccctgg gtggtgcaca gttctccagc ggtaccgcaa ccgcaatcgc
     2161 cggtaccgct gacactgaca ccgcagtggg tgcgttcacc atcaccgaca gcaagggcac
     2221 cgtcttcaac ttcggcgcca tgacggtcaa gagcgtcggt gacgctgccg ccaacaccgc
     2281 tgcaaacggc aaggccgtcg ttgccgccat caatgcgaag atcggcgaaa ccggcgtgct
     2341 ggccgaaacc gatgccgccg gcgcactgac cctgacctcg gtcaaggaca gcgtgaacaa
     2401 cgcgggcgct ttcactgcca tcggcagctc gctggccggc ttcgccgcag caaccccggt
     2461 cccgggcaag cagttcgccg acaagatcga cgtgtccacc gtgaagggtg cgcagcaggc
     2521 gatggaagtg gtcgacaagg ccctgggcgc gatcaacagc acccgtgccg acctcggtgc
     2581 gatccagaac cgcttcacct cggtggtggc caacctgcag acctcgtcgg aaaacctgtc
     2641 ggcatcgcgc agccgcatca aggacaccga cttcgccaag gaaaccgccg agctgacccg
     2701 cacccagatc ctgcagcagg ccggtacggc catgctggcc caggccaacc aggtgccgca
     2761 gggcgtgctc agcctgctgc gctgatccgc tccctgatcg accgccgggc ggcatctgaa
     2821 ccgccgcccg gcgcctgaaa cacgttccac cttcgccaaa ggaaagcacc atggcacaag
     2881 tcatcaacac caacaccatg tccctgaatg ctcagcgtaa cctgagcacc agcggcagct
     2941 cgctggccac caccatccag cgcctgtcct ccggttcgcg catcaacagc gccaaggacg
     3001 acgccgccgg tctggcgatc tccgagcgct tcggcactca gatccgcggc accgacgtcg
     3061 ccatccgcaa tgccaacgat ggcatctcgc tggcccaggt cgccgaaggt tcgctgaccg
     3121 aaatcggcaa caacctgcag cgcgtccgcg agctgtcggt gcaggcctcc aacgccacca
     3181 actcggccag cgaccgcaag gcgctgcagg ctgaagtgac ccagctggtc tcggaaatcg
     3241 accgcgtcgc caagcagtcg gacttcaacg gcaccaagct gctggacggc acgttctcca
     3301 gccagctgtt ccaggtcggc gccaatgccg gccaggccat cgccatcgac aagaccatcg
     3361 atgcgaaagc gggttcgctg ggcacctcga ccttcgcaag cggcgcaact gacgtactgg
     3421 ccgccagtac cgacggctcg cgcattaccg gcaaggtaat gggcgtggac atcggcaccg
     3481 tcgagatcaa ggccggcgcc tccactgccg atgcgtccaa ggctgtcgcc acggcgatca
     3541 atgccaagat cggcgaagcc ggcctctatg ccgaggcgaa tgccgatggc tcgatgaaac
     3601 tgacctcggt gaaggaaggc aaggcggtcg tcgctgccga catcgcgctt gagcgcagcg
     3661 acctgaacgc cggcaccggc gtgtggggcg cgaagaatgc agccgctggt tacaccgctg
     3721 gcaccgccac cgctgccaac gtgcagaagc tggacgtgag cacggtgctt ggtgcacagc
     3781 aggcaatgga agtggtcgac aaggccctgg gcgcgatcaa cagcacccgc gccgacctcg
     3841 gtgcgatcca gaaccgcttc acctcggtcg tggccaacct gcagacctcg tcggaaaacc
     3901 tgtcggc
//
LOCUS       DAOKIP010000286         3899 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.290,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000286 DAOKIP010000000
VERSION     DAOKIP010000286.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 3899)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3899)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3899
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.290"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..692)
                     /locus_tag="QEL58_003754"
     CDS             complement(<1..692)
                     /locus_tag="QEL58_003754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002812100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase"
                     /protein_id="HDS1678180.1"
                     /translation="MQYALYYWTGIQGRGEFVRLALEDAGADYIDMARVHGDAVMQPF
                     LDGNSEGALPFAPPFLKAGRQVIAQVAAILDFLGPTLDLVPQAASRRTQALQLQLTIA
                     DLVAEVHDTHHPIAASKYYEEQKTEAKARAISLRSERLPKYLGHFEQVLAANGGRHAL
                     REHSYVDLSLFQLLSGLDYMFPRRMRALAPTLPLLRALQERVAERPNIAAYLASERRL
                     AFNTNGIFRHYP"
     gene            865..1689
                     /locus_tag="QEL58_003755"
     CDS             865..1689
                     /locus_tag="QEL58_003755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005915768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3014 domain-containing protein"
                     /protein_id="HDS1678181.1"
                     /translation="MQSGKAVWPWVLGVVVIGGAGGWLFRDQLKGLADGVSVPVQSPP
                     ASSGAPPQPKAAAAPAPAPPPIKHPLDSGDAADPALPKLADSDAAAWGALSQLFQGEG
                     PLTLLLRDHLIQRLVTQVDNLDKPSVPPTALAARPLPGSLQVEPDEGGERIAAANAAR
                     YAPYVQAFTALDPAATAAAYKRFYPLIQQAYVDLGRPEGYFNDRLVAVIDHLLDTPEL
                     VQSPQVERDERGRYRFVDPTLQSRSIGQKALLRMDPAQARAVKQQLQAIRSAITRG"
     gene            1773..3116
                     /locus_tag="QEL58_003756"
     CDS             1773..3116
                     /locus_tag="QEL58_003756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="retropepsin-like domain-containing protein"
                     /protein_id="HDS1678182.1"
                     /translation="MWLGVSALFATTVASAAAVETRDGELGDPYGYTRSVRLAELSRL
                     QTLGKSPGVKGKLGQAGFYRVRGELDRSSQAAHECLKAVASEAADSVKGVEYLCSATL
                     AGNLLLQGDIAGWAAQMLQVRTLMERDIRPMLSPKLRDIHLAGISEPHFERFTAWPRN
                     AMAAQAPASDISVPLQLDNELPTLRLKLRTAAGERELRVHLDSGAAHSRIGRVLATEL
                     GLTLTEGFMAVDGSPGKLYALAAPVELDIGGVAVRDVSFAVLGQDDLPRIGLDVLRAL
                     GRVRVNKDALVIQATASPVPCTRRMATLSSLWADAYDVRYPIRAGKQNVLVKVDTGFN
                     GAFQARGTLPTTPPASAIRRKNVITTEGSEDIQFVEATTPVMIGEEVLNLPMDLGLSP
                     GPNPLFNPDWRVGFAATQRYSLYMDVEGTYGCPVAVAVAPPLLPPKPAPTLPAGG"
     gene            complement(3124..>3899)
                     /locus_tag="QEL58_003757"
     CDS             complement(3124..>3899)
                     /locus_tag="QEL58_003757"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008264995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HDS1678183.1"
                     /translation="WADGRRVSFGHGRQPGRRNAPSVATSAHVAPLFWDGRAATLEGQ
                     ALHPIADPIEMGFTTQGAVRRLRRDASYRADFAAVFAQPRIDAAQLGQAIAAFERSLS
                     PRNSRFDRFLRGDTRALDDAQLRGLHLFRTQAGCMNCHSGAALTDNGFHNLGLHFHGR
                     ARQDLGRYEVTGDPADSGRFRTPSLRGVANTAPYMHNGLIPRLSGVLAFYNVGGARPR
                     APGSLPADAAPFPEPDPLLRPRGLGRQDLQDIEAFLQSL"
BASE COUNT          642 a         1280 c         1380 g          597 t
ORIGIN      
        1 tccgggtaat ggcggaagat gccgttggta ttgaacgcca gccgccgttc cgaagccagg
       61 taggcggcga tgttcgggcg ctcggccacg cgctcctgca gcgcacgcag caggggcagg
      121 gtgggggcca gtgcccgcat ccggcgtggg aacatgtagt ccagcccgct cagcagctgg
      181 aacagcgaca gatccacata ggaatgctcg cgcagggcat ggcggccgcc gttggcggcc
      241 agtacctgct cgaaatggcc gaggtacttc ggcaatcgtt cgctgcgcag cgagatcgca
      301 cgcgccttgg cctcggtctt ctgctcttcg tagtatttcg acgcggcgat cggatggtgg
      361 gtgtcatgga cctcggccac caggtcggcg atggtcagtt gcaactgcag cgcctgcgtc
      421 cgccgcgacg cggcctgcgg caccagatcc agggtcggac cgagaaaatc caggatggcc
      481 gccacctgcg cgatcacctg ccggcccgcc ttcaggaacg gcggtgcgaa gggcagtgca
      541 ccctcgctgt ttccatcgag gaacggctgc atcaccgcat cgccatgcac ccgcgccatg
      601 tcgatgtagt cggcgccggc atcttccagc gccagccgca cgaattcacc ccggccctgg
      661 atgccggtcc agtagtacag cgcgtactgc atgacagcgt ctccgcacga caagacccac
      721 agcctcgcgc agggtgtgca aagcaggcgt gagcgtggcg catgcgcagc ccccaacccc
      781 aacggcagcg gaacaggcag ggaacccatg gaaatcaacc gggtcacacc ttgtccatgc
      841 aggtgaacaa cgagggactg catcatgcag agtggaaagg cggtatggcc ctgggtgctg
      901 ggcgtggtgg tgatcggtgg cgcggggggc tggttgttcc gcgatcagct gaagggcctg
      961 gcagacggtg tgtcggtgcc ggtgcagtcc cctcccgcca gcagcggtgc accgccacaa
     1021 ccgaaggcag ccgcagcgcc tgcgccagca cccccgccga tcaagcatcc gctcgatagc
     1081 ggggacgcgg ccgacccggc gctgccgaag ctggctgaca gcgatgccgc cgcctggggc
     1141 gcgctgagcc agctgttcca gggcgagggg ccgttgaccc tgttgctgcg cgaccacctg
     1201 atccagcgcc tggtgaccca ggtcgacaac ctggacaagc ccagcgtgcc gccgaccgca
     1261 ctggccgcgc gcccgctgcc cggcagcctg caggtcgagc ccgatgaagg cggcgagcgg
     1321 attgccgcgg ccaatgcggc gcgctatgcg ccctacgtgc aggcgttcac tgcgctggac
     1381 ccggcggcga cggcggctgc gtacaagcgc ttctatccgc tgatccagca ggcctatgtc
     1441 gacctgggcc ggcccgaagg ctatttcaac gaccgcctgg tcgcggtgat cgaccatctg
     1501 ctggacacgc cggaactggt gcagtcgccg caggtggaac gcgatgaacg cggccgctac
     1561 cgctttgtcg atcccacgtt gcagtcgagg tcgatcggcc agaaggcgct gctgcgcatg
     1621 gacccggcgc aggcgcgggc ggtcaagcag cagctgcagg cgatccgcag cgcgattacc
     1681 cgcggctgaa ggctgaagac tgcaggggca ggtgtcatcg ccagcgtgat agggtctgga
     1741 tcaggtagac aggagtgacc tcgatgcatc gaatgtggtt gggcgtgagt gcgttgttcg
     1801 ccacgacagt ggcctcggct gcggccgtcg agacgcgcga tggcgaactg ggcgatccct
     1861 acggctacac ccgcagcgtg cgccttgccg aactgtcccg gctgcagacg ctgggcaagt
     1921 cacccggtgt gaagggcaag ctgggccagg cgggtttcta ccgcgtgcgc ggcgagctgg
     1981 accgctccag ccaggcggct catgagtgcc tgaaggccgt ggccagcgag gcggccgaca
     2041 gtgtgaaggg ggtcgagtac ctgtgttcgg ccaccctggc cggcaatctg ctcctgcagg
     2101 gcgatatcgc gggttgggcg gcgcagatgc tccaggtccg cacgctgatg gagcgcgata
     2161 tccggccgat gctgagcccc aagctgcgcg acatccatct tgccggtatc agcgagccgc
     2221 atttcgagcg gtttaccgca tggccgcgta atgccatggc agcgcaggcg ccagccagcg
     2281 acatcagtgt ccccctgcag ttggacaacg aactgccgac gctccgcctg aagctgcgca
     2341 ccgcagccgg tgagcgcgag ctgcgcgtgc atctggacag cggcgccgca cactcgcgca
     2401 tcggccgagt gctggcgacc gagctgggct tgacgctgac cgagggcttc atggcggtcg
     2461 atggcagccc tggcaagttg tatgcgctgg cggcaccggt cgagttggac atcggtggtg
     2521 tcgccgtgcg cgatgtgtcc tttgcggtac tgggccagga cgacctgcca cgcatcggcc
     2581 tggatgtact gcgcgcgctg ggccgggtgc gggtcaacaa ggatgcgctg gtgatccagg
     2641 ccacggccag cccggtgccg tgcacgcggc ggatggccac gctgtcctcg ctatgggcgg
     2701 atgcgtacga cgtccgctat ccgatccgcg ctggcaagca gaacgtgctg gtcaaggtgg
     2761 ataccggctt caacggcgcc ttccaggccc gcggaacgtt gccgaccacg ccacccgcgt
     2821 cggcgatccg gcgcaagaac gtgatcacca ccgaaggcag cgaagacatc cagttcgtgg
     2881 aagcgaccac gccggtcatg atcggggagg aagtgctgaa cctgccgatg gacctggggc
     2941 tgtcgcccgg gcccaacccg ctgttcaacc cggactggcg cgtgggcttt gccgcgaccc
     3001 agcgctacag cctgtacatg gatgttgaag gcacctatgg ctgcccggtg gccgttgcgg
     3061 tggcgccacc gctgttgccg cccaagccgg ctcccacgct gcctgcaggc ggctgatccg
     3121 cggctacagg ctctgcagga acgcctcgat gtcctgcaga tcctggcggc ccagcccgcg
     3181 cggccgcagc agtggatccg gctctgggaa cggcgccgca tcagccggca gcgagcccgg
     3241 tgcgcgcggg cgcgcgccgc ccacgttgta gaacgccagc acgcccgaca ggcgcgggat
     3301 caggccgttg tgcatgtacg gtgccgtgtt ggccacgcct cgcagcgagg gcgtgcggaa
     3361 gcgcccgctg tcggccggat cgccggtgac ttcgtagcgg cccagatcct gccgcgcacg
     3421 gccgtggaaa tgaaggccca ggttgtggaa gccgttgtcg gtgagtgctg ccccgctgtg
     3481 gcagttcatg caaccggcct gcgtgcggaa caggtgcagg ccgcgcagct gggcatcgtc
     3541 cagtgcacgc gtatcgccac gcaggaagcg atcgaagcga ctgttgcgcg gcgacaggct
     3601 gcgctcgaag gcagcgatgg cctggccgag ctgggcggca tcgatgcgcg gctgcgcgaa
     3661 caccgcggcg aagtcagcac gataggacgc atcgcggcgc aggcgacgca cggcgccctg
     3721 cgtggtgaac cccatctcga tgggatcggc gatgggatgc agcgcctgcc cttccagcgt
     3781 ggccgcgcgt ccatcccaga acagcggtgc cacgtgtgcg ctggtggcaa cgctgggtgc
     3841 attgcggcgg ccgggctggc gtccgtgccc gaaggacacg cgacgaccat cggcccagc
//
LOCUS       DAOKIP010000287         3896 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.291,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000287 DAOKIP010000000
VERSION     DAOKIP010000287.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 3896)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3896)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3896
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.291"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(15..521)
                     /locus_tag="QEL58_003758"
     CDS             complement(15..521)
                     /locus_tag="QEL58_003758"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005408235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1678184.1"
                     /translation="MLRSASAAVLALALVPAAHAAVDCSVNTSAAPLPLPATTIAPVA
                     DELYIRGNQLGMPAGVLSGNYDPSQSLDQVLQRLRIDGCQNIAKAIPSAPAVKPNDPA
                     AYKPQTEFDNTPWRFDMSQNGKRMTAEEFDAWMKARGVRVVKARPAPAATPAAAEAPA
                     ETKPVDKK"
     gene            complement(742..1830)
                     /locus_tag="QEL58_003759"
     CDS             complement(742..1830)
                     /locus_tag="QEL58_003759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017171142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HDS1678185.1"
                     /translation="MNKKILTAALLGGLAFAQAASAQEFDDRWYLTGSAGFNFQDNDR
                     LTNDAPFVTLGLGKFISPNWSLDGELNYQNPNFDSNKDQNWSQYGVSLDMRRHFIKEG
                     RGWNPYILGGLGYQKSEETYPLSAAGPGKRKDGNLAAKVGVGLQTTFEKRVAVRAEVA
                     YRADFDDQSIAARDESWFGDVLASVGVVIPLGPAPVAAAPAPAPVAPSCADLDDDGDG
                     VNNCDDKCPNSQPGQTIGPDGCPVPVSIDLKGVNFDFDKSNLRPDAVAILSEATEILK
                     RYPDLRVEVAGHTDSKGTDAYNQKLSERRATAVYNYLTKNGVDAGRLVGPIGYGESRP
                     IAPNTNPDGSDNPEGRAKNRRTELNVQN"
     gene            2188..3207
                     /locus_tag="QEL58_003760"
     CDS             2188..3207
                     /locus_tag="QEL58_003760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005408233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding alcohol dehydrogenase family
                     protein"
                     /protein_id="HDS1678186.1"
                     /translation="MKAVALSRESAPSLCDVRLPPPLPPSGRDLLVRVEAVSVNPVDG
                     KQRAATDPATLATPRVLGWDAAGVVEAIGDEASLFASGDEVYYAGDVTRPGCNAQYQW
                     VDERLVARKPTTLDFAEAAALPLTTLTAWELLFQRMPLQLDDRRHAGQHLLVIGGAGG
                     VGSMAIQLARHAGFEVIATASRETSVDWCRQMGAQHVIDHRHALLPQLQALGIDAVQV
                     ALNLADTDHYWDELGQLLAPQGHVGLIVEPRGALRIGDPYKAKCIGIHWEFMFSRSRF
                     GTADRIEQHRILSRAASMIDAGQLRGTLSETLGRINAANLDSAHQRLASGRTVGKLAL
                     AGWDD"
     gene            3318..>3896
                     /locus_tag="QEL58_003761"
     CDS             3318..>3896
                     /locus_tag="QEL58_003761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005412352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1678187.1"
                     /translation="MPTALPLRLLQLIVGLFLYGFGASLMIRAAIGVAPWDVLSQGIA
                     AQTPLSFGLATNVIGALVLLLWWPLRQKPGVGTVLNVLLIGPSAQFGLWLLPPAVGLG
                     WQLAMFCAGMLLVALATGLYIGAKLGPGPRDGLMTGLHARTGWPIWKVRSLIEGSVLL
                     LGWWLGGNVGLGTLAFALLIGPLCGVTLGWFGI"
BASE COUNT          651 a         1275 c         1270 g          700 t
ORIGIN      
        1 gctccccgcg gcgcttactt cttgtcgacc ggcttggtct cagccggtgc ttcggccgca
       61 gccggggtcg cggccggagc cggacgcgcc ttgaccacgc gcacgccgcg cgccttcatc
      121 caggcgtcga attcttcggc ggtcatgcgc ttgccgttct ggctcatgtc gaagcgccac
      181 ggcgtgttgt cgaactcggt ctgcggcttg taggcggccg gatcgttcgg cttcaccgcc
      241 ggcgcgctcg gaatggcctt ggcgatgttc tggcagccat cgatgcgcag tcgctgcagc
      301 acctggtcca gcgactgcga cggatcgtag ttgccgctca gcacgccggc gggcatgccc
      361 agctggttgc cgcggatgta cagctcatcg gccaccggcg cgatggtcgt ggccggcaac
      421 ggcagcggcg cggcgctggt gttgaccgag caatcgaccg cagcgtgggc ggcgggaacc
      481 agggccagtg ccaggacggc ggccgatgca gagcgcagca tgagggacat ccacggaagg
      541 aagtgacgcg gcgagtttag caatgccacg tcatctttca agcgccactt tcaatgaata
      601 cggcaaccca ttggttttac gaacaaaata ccgacgaacg gtcgcgtcat accgttggaa
      661 acgccgaatt ccgggccgca gaaacaacaa gacccggccg aagccgggtc ctgctgtgtc
      721 ttactggcag agcgtcagaa cttagttctg gacgttcagc tcggtacgac ggttcttggc
      781 gcgaccttcc gggttatccg aaccatccgg gttggtgttc ggagcaatcg gacggctctc
      841 gccgtagccg atcgggccga ccaggcgacc ggcgtcaacg ccgttcttgg tcaggtagtt
      901 gtacacggcg gtggcgcgac gctccgacag cttctggttg taagcgtcgg tacccttcga
      961 gtcggtgtga ccggcaactt caacgcgcag atccgggtaa cgcttcagga tctcggtggc
     1021 ttcgctcagg atcgccacgg cgtccggacg caggttcgac ttatcgaagt cgaagttgac
     1081 gcccttcagg tcgatggaga ccggcaccgg gcaaccgtcc ggaccgatgg tctgacccgg
     1141 ctgcgagttc gggcacttgt cgtcgcagtt gttgacgccg tcaccgtcgt cgtccaggtc
     1201 ggcgcagctc ggggcaaccg gagccggagc cggagcagcc gcgaccggag ccgggcccag
     1261 cgggatcacg acgccgaccg aagccagcac gtcaccgaac cagctttcgt cgcgtgcagc
     1321 gatgctctgg tcgtcgaagt cagcgcggta ggccacttcg gcgcgcacgg caacgcgctt
     1381 ctcgaaggtg gtctgcaggc cgacgccgac cttggcggcg aggttgccgt ccttgcgctt
     1441 acccgggcca gcggcgctca gcgggtaggt ctcttccgac ttctggtagc ccaggccacc
     1501 caggatgtac gggttccagc cacggccttc cttgatgaag tggcgacgca tgtccagcga
     1561 gacgccgtac tgcgaccagt tctggtcctt gttcgaatcg aagttcgggt tctgatagtt
     1621 cagctcaccg tccagcgacc agttcgggct gatgaactta cccaggccca gggtcacgaa
     1681 cggagcgtca ttggtcagac ggtcgttgtc ctggaagttg aagccggccg aaccggtcag
     1741 gtaccagcgg tcatcgaact cctgcgccga cgcagcctgg gcgaaagcca gaccacccag
     1801 cagcgcggca gtaaggatct tcttgttcat tgagtacagc tcctatttcg ggggtatgaa
     1861 accggtagag gcatgggcca gcactagtgc gtcgatgttc gacagccgat tcagcacgcc
     1921 accgccgcga acattatgct caggcgggtg aaggtcatgt taacagtccc gtaacatgtg
     1981 aaatatcgcg cccgaccctc caccggtccg acgttgaaac cctatacagg atgatgaaaa
     2041 tccgcaagac ccgcgcgctg caagggtttg acgaggttta agtggcaaaa acgacatgct
     2101 gcccaacccg gtgctcgaca gccttcagcg cacttgcgga aaggtgagga accttatgat
     2161 gggaccacga acccagccgg agccgagatg aaagccgtcg ccctgagtcg tgaatccgcc
     2221 ccttccctgt gcgatgtccg cctgccacca ccgctgcctc cgagtggccg cgatctgctg
     2281 gtccgggtcg aagcggtctc ggtcaaccct gtcgacggca agcagcgtgc cgccaccgat
     2341 ccggccacgc tcgcaacgcc ccgtgtactc ggctgggatg ccgctggcgt ggtcgaggcg
     2401 atcggtgacg aggccagcct gttcgcctcc ggtgacgagg tctactacgc aggcgatgtc
     2461 actcgcccgg gctgcaacgc ccagtaccag tgggtggatg aacgcctggt cgcacgcaaa
     2521 ccgaccacgc tggatttcgc cgaagccgcg gccctgccac tgaccacgct caccgcctgg
     2581 gagttgctgt tccagcgcat gccattgcag ttggatgacc gccgtcatgc cggccagcac
     2641 ctgctggtga tcggcggcgc aggcggcgtc ggctcgatgg cgatccagct ggcccgccac
     2701 gcaggcttcg aggtgatcgc cacagcgtcc cgcgaaacct cggttgactg gtgccggcag
     2761 atgggagccc agcatgtgat cgaccatcgg catgcgctgc tcccgcagtt gcaggcgctg
     2821 ggcatcgatg cggtacaggt cgcgctcaac ctggccgaca ccgaccacta ctgggatgag
     2881 ctgggccagc tgctggcacc gcagggccat gtcggcctga tcgtcgaacc gcgcggcgcg
     2941 ctgcgcatcg gcgatcccta caaggccaag tgcatcggca tccactggga attcatgttc
     3001 tcgcgctcgc gcttcggcac cgccgaccgc atcgaacagc accggattct cagccgcgcg
     3061 gccagcatga tcgacgccgg ccagctgcgc ggcaccctca gcgaaacgct gggcaggata
     3121 aatgcagcca acctggacag cgcgcatcaa cgcctggcca gcggccgcac ggtgggcaag
     3181 ctggcgctgg caggctggga cgactgacgc cggcgcggcg catccacctg tgcggtcgga
     3241 ttggccgtca tctgtatcta tggaagcggc tgaatcgagc ttacggtgga aacagatcct
     3301 ccaccccgag ccccgtcatg cccaccgccc tgcccctgcg cctgctgcaa ctgatcgtcg
     3361 gcctgttcct gtacggcttc ggcgcctcat tgatgatccg tgccgcgatc ggagtcgcgc
     3421 catgggacgt gctgtcacag ggtatcgccg cacagacccc gctttcgttt ggcctcgcca
     3481 ccaacgtgat cggtgctctg gtgttgctgc tgtggtggcc actgcggcag aagccgggcg
     3541 tcggcaccgt gctcaacgtg ctgctgatcg gcccgtccgc gcagttcggg ctgtggctgc
     3601 tgccgcctgc cgtcggcctc ggctggcagc tggcgatgtt ctgcgccggc atgctgctgg
     3661 tcgccctggc caccggcctg tacatcggcg ccaagctcgg cccgggcccg cgcgatggcc
     3721 tgatgaccgg cctgcacgcc cgcaccggct ggccgatctg gaaggtgcgc agcctgatcg
     3781 agggcagcgt gctgctgctg ggctggtggc tgggcggcaa cgtcggcctc ggcaccctgg
     3841 ccttcgccct gctgatcggt ccgctgtgcg gagtaacgct gggctggttc ggcatc
//
LOCUS       DAOKIP010000288         3882 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.292,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000288 DAOKIP010000000
VERSION     DAOKIP010000288.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 3882)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3882)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3882
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.292"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(25..1203)
                     /locus_tag="QEL58_003762"
     CDS             complement(25..1203)
                     /locus_tag="QEL58_003762"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014038868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathionylspermidine synthase family protein"
                     /protein_id="HDS1678188.1"
                     /translation="MQRIRIAERAQWRARAEEAGFRFHTIDGQPYWDESAYYAFTLRQ
                     IEQDIEDPSAELHQMALDLVGDVIASERLMDQLAIPSHYRDWIADSWRQRQPHLYGRL
                     DLAYDGTGPAKLYELNYDTPTSLFEASFFQWQWLEDQRNAGRLPQHADQFNAIHEALV
                     ERFGELAAQLPPPLYFSAVGSSDEDRGTVDYLRDCASQAGLHGQAIAIEDIGLSEDGR
                     FTALDDSVIGTLFKLYPLEDLMAEEFGRALPGSGVQLLEPAWKAVLSNKGILPLLWQR
                     NVGHPNLLEAHFDDGSTLASGWVRKPLFSREGANIEMHLADGSTQRSDGPYDGPAIIQ
                     RAHPLTRFEGGYPLIGSWVVGDHACGIGIREDDSAITRDSARFVPHAIVDEAPTRIYV
                     "
     gene            complement(1211..1783)
                     /locus_tag="QEL58_003763"
     CDS             complement(1211..1783)
                     /locus_tag="QEL58_003763"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014038869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1190 domain-containing protein"
                     /protein_id="HDS1678189.1"
                     /translation="MKRSRTTALLLMSAAPLLFTACQKEPEVKVQEGLYTSVEACTEA
                     TGDPSSCRNAFAEAQKQAADAAPKYASKEACEKDYKPEQCVQQHTSAGTSFIGPMMMG
                     FFMSQMLSNRGGLAPQAPAASPAYQDKSAGWARPAPGGSGGLNTASGIGAGKAGLAPV
                     TSEPNRAVTASRGGFGNTSARRSTSGSYGG"
     gene            2193..>3882
                     /gene="ilvD"
                     /locus_tag="QEL58_003764"
     CDS             2193..>3882
                     /gene="ilvD"
                     /locus_tag="QEL58_003764"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012437115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HDS1678190.1"
                     /translation="MPEYRSRTSTAGRNMAGARALWRATGMKDGDFHKPIIAIANSFT
                     QFVPGHVHLKDLGQLVAREIEQVGGVAKEFNTIAVDDGIAMGHDGMLYSLPSREIIAD
                     AVEYMVNAHCADALVCISNCDKITPGMLMAALRLNIPVVFVSGGPMEAGKTKLSEHKL
                     DLVDAMVVAADDSASDEKVAAFERSACPTCGSCSGMFTANSMNCLTEALGLSLPGNGT
                     TLATHADREALFRRAGRLIVELCHRWYGGEDPSALPRGIATQAAFANAMTLDIAMGGS
                     TNTILHLLAAAQEAEVDFDLTHIDALSRRVPQLCKVAPNTPKYHIEDVHRAGGVFGIL
                     GELDRAGLLDTGVPTVHSASLADALERWDVVRSDNDTLHTFFKAGPAGIPTQEAFSQA
                     TRWPTLDVDRAEGCIRSLQHAYSLEGGLAVLRGNLAVDGCVVKTAGVDESIHVFEGPA
                     RVYESQDAAVAGILADEVQPGEVVVIRYEGPKGGPGMQEMLYPTSYLKSKGLGKQCAL
                     LTDGRFSGGTSGLSIGHVSPEAASGGVIGLVEDGDRIRIDIPARRIDLLLDDATL"
BASE COUNT          630 a         1332 c         1296 g          624 t
ORIGIN      
        1 acggccctgt gggccgcacc cccatcagac gtagatccgc gtcggcgcct cgtccacgat
       61 cgcgtgcggc acgaagcgcg cactgtcgcg ggtgatcgcg ctgtcgtcct cgcggatgcc
      121 gatgccgcag gcgtgatcgc cgaccaccca actgccgatc agcgggtaac cgccttcgaa
      181 acgggtgagc ggatgcgcgc gctggatgat cgccgggccg tcgtagggac cgtcgctgcg
      241 ctgcgtgctg ccgtcggcca ggtgcatctc gatgttggcg ccttcgcgcg agaacagcgg
      301 cttgcgcacc cagcccgagg ccagcgtgct gccatcgtcg aagtgcgctt ccagcaggtt
      361 cggatgaccg acattgcgct gccacagcaa cggcaggatg cccttgttgc tcagcaccgc
      421 cttccacgcc ggctccagca gctgtacgcc cgagccgggc agcgcgcggc cgaattcctc
      481 ggccatcagg tcttccagcg ggtacagctt gaacagcgtg ccgatcaccg aatcatccag
      541 cgcggtgaaa cggccgtctt cggacaggcc gatgtcctcg atggcgatgg cctggccatg
      601 caggccggcc tgcgaggcgc aatcacgcag atagtcgaca gtgccgcggt cttcatccga
      661 gctgcccacg gcgctgaagt acagcggcgg tggcagctgc gcggccagtt cgccgaagcg
      721 ttcgaccagt gcctcgtgga tggcgttgaa ctggtcggcg tgctgcggca ggcgaccggc
      781 gttgcgctgg tcttccagcc actgccactg gaagaagctg gcctcgaaca gcgaggtcgg
      841 cgtgtcgtag ttcagttcgt acagcttggc cggaccggtg ccgtcgtagg ccaggtccag
      901 gcgcccgtac agatgcggct ggcgctggcg ccagctgtcg gcgatccagt cgcggtagtg
      961 cgacggaatc gccagctggt ccatcaatcg ctcgctggcg atgacatcgc cgaccaggtc
     1021 cagcgccatc tggtgcagct cggcgctggg gtcttcgatg tcctgttcga tctggcgcag
     1081 ggtgaaggcg tagtacgcgc tttcatccca gtacggctgg ccatcgatgg tgtggaagcg
     1141 gaaacccgcc tcttccgcgc gtgcccgcca ctgggcacgc tcggcaatcc ggatgcgctg
     1201 catgggtcga tcagccgccg tagctgccgc tggtgctgcg gcgcgcgctg gtgttgccga
     1261 agccaccacg gctggcggtg accgcacggt tcggttcgct ggtgaccggg gccaggccgg
     1321 ccttgcccgc gccgatgcca ctggcggtgt tcaggccacc gctaccgccc ggggccgggc
     1381 gcgcccaacc agcgctcttg tcctggtagg ccggcgacgc cgccggcgcc tgcggggcca
     1441 ggccgccgcg gttgctcagc atctgcgaca tgaagaagcc catcatcatc gggccgatga
     1501 acgaggtacc cgccgacgtg tgctgctgca cgcactgttc cggcttgtag tccttctcgc
     1561 aggcttcctt gctggcgtac ttcggcgccg catcggcggc ctgcttctgc gcttcggcga
     1621 aggcgttgcg gcacgaggac ggatcgccgg tggcctcggt gcaggcctcc accgaggtat
     1681 acaggccttc ctgcaccttc acctccggct ccttctggca ggcggtgaac agcagcggcg
     1741 cggcgctcat cagcagcagc gcggtggtgc gggaacgttt catggcctca tgccctgtcg
     1801 acggatcaat gccccaatga tgccaaatcc tggccaacaa ccggaatcgg caaagtccga
     1861 aagatgaacg gactttcatt ttcgtcgggc attggggtca gaggccatcg cgccacgatg
     1921 ggatccgact ccggacggcg caccgctctg gtaggtgcca acctgggttg gcacacaccc
     1981 ggcggcgccc ggcgatgccc agcgcgcaca gccaagtctc cggcgagaag cccccttgtt
     2041 gttcaagggg gcgcgccgaa ggcgcgggga taaggggaaa tgcgtggacc accaagccgc
     2101 tgcaagcggt gaaggtggtt gcagcagcaa ccgaaaaaat tgtccatgat cgggcgaccc
     2161 tcacgtcgta cggcccgccc gttccgccag ccatgcccga ataccgttcc cgcacctcca
     2221 ccgccggccg caacatggcc ggcgcccgcg ccctgtggcg tgccaccggc atgaaggacg
     2281 gcgacttcca caagccgatc atcgccatcg ccaactcctt cacccagttc gtgcccggcc
     2341 acgtgcacct gaaggacctc ggccagctgg tcgcacgcga gatcgagcag gttggcggtg
     2401 tcgccaagga attcaacacc atcgccgtgg acgacggcat cgcgatgggc cacgacggca
     2461 tgctgtactc gctgcccagc cgcgagatca tcgccgacgc cgtggagtac atggtcaacg
     2521 cgcactgcgc cgacgcgctg gtgtgcatca gcaactgcga caagatcacc cccggcatgc
     2581 tgatggccgc actgcgcctg aacatcccgg tggtgttcgt ctccggcgga ccgatggaag
     2641 caggcaagac caagctgtcc gagcacaagc tggacctggt cgacgcgatg gtggtggccg
     2701 ccgatgacag cgcctccgac gagaaagtgg cggccttcga gcgcagtgcc tgccccacct
     2761 gtggttcgtg ctcgggcatg ttcaccgcca actcgatgaa ctgcctgacc gaagcgctgg
     2821 gcctgtcgct gcccggcaac ggcaccacgc tggccaccca cgccgaccgc gaggcgctgt
     2881 tccgccgcgc cggccgcctg atcgtcgaac tctgccaccg ctggtatggc ggcgaagacc
     2941 cgagcgcgct gccgcgcggc atcgccaccc aggccgcgtt cgccaatgcg atgaccctgg
     3001 acatcgccat gggcggatcg accaacacca tcctgcacct gctggccgct gcgcaggaag
     3061 cggaggtcga cttcgacctg acccatatcg atgccttgtc gcggcgcgta ccgcagctgt
     3121 gcaaggtggc acccaacacg ccgaagtacc acatcgagga cgtgcaccgc gccggcggcg
     3181 tgttcggcat cctcggtgaa ctggaccgcg cgggcctgct cgataccggc gtgccgaccg
     3241 tgcacagcgc cagcctggcc gacgcgctgg aacgctggga cgtggtgcgc agcgacaacg
     3301 acaccctgca caccttcttc aaggccggcc cggccggcat tcctacccag gaggccttca
     3361 gccaggccac gcgctggccg acgctggacg tggaccgcgc cgagggctgc atccgctcgc
     3421 tgcagcacgc ctattcgctg gaaggcgggc tggccgtgct gcgcggcaac ctggccgtgg
     3481 atggctgcgt ggtgaagacc gccggcgtgg atgagtcgat ccacgtgttc gagggcccgg
     3541 cacgcgtcta cgaaagccag gacgctgccg tcgccggcat cctcgccgac gaagtgcagc
     3601 cgggcgaggt ggtggtgatc cgctacgaag gcccgaaggg tggcccgggc atgcaggaga
     3661 tgctgtatcc gaccagttac ctgaagtcga aggggctggg caagcagtgc gcactgctga
     3721 ccgatgggcg cttctccggt ggcacctcgg gcctgtcgat cggccacgtc tcgccggaag
     3781 cggccagcgg cggggtcatc ggcctggtcg aagacggcga ccgcatccgc atcgacatcc
     3841 cggcccgtcg catcgatctg ctgctggatg acgccaccct gg
//
LOCUS       DAOKIP010000289         3864 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.293,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000289 DAOKIP010000000
VERSION     DAOKIP010000289.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 3864)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3864)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3864
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.293"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..611)
                     /locus_tag="QEL58_003765"
     CDS             complement(<1..611)
                     /locus_tag="QEL58_003765"
                     /EC_number="4.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011038943.1"
                     /note="catalyzes the formation of agmatine from arginine
                     in putrescine and spermidine biosynthesis; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine decarboxylase"
                     /protein_id="HDS1678191.1"
                     /translation="MTDWSLDQARKTYSIPHWADGYFDVDQAGHMVVRPTGADGPVVS
                     LPKVVDAARAAGAKLPLLVRFPDILGQRLGKLQAAFGQAQQDWEYSGGYTAVYPIKVN
                     QTRGVAGTLASHHGEGFGLEAGSKPELMAVLALSRPGGLIVCNGYKDREYIRLALIGR
                     KLGLQTFIVIEKPSELKLVLEESKALDVKPGLGVRMRLASLGAG"
     gene            803..1657
                     /gene="speE"
                     /locus_tag="QEL58_003766"
     CDS             803..1657
                     /gene="speE"
                     /locus_tag="QEL58_003766"
                     /EC_number="2.5.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019185260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine aminopropyltransferase"
                     /protein_id="HDS1678192.1"
                     /translation="MTDSNNWYIEHFERTGSAIGYRITGKLDEVQSPFQKIEIFQTTD
                     WGNLMTIDGAIMLTSKDNFFYHEMISHPVLFTHAAPKRVVIIGGGDCGTLREVLKHKG
                     VESVTQCDIDEQVTVMARKHFPELCDSNDDARAELLFDDGVAYMANCPAGSVDVVIVD
                     STDPVGPGEGLFNKAFYESCFKALKDDGILVQQSESPLMQLDLINEMRTEMGKAGFGS
                     FKTLPFPQPCYPTGWWSVTMARKGDSSFDFRQADSAAKTFNTLYYTAALHTGVLVTPP
                     FVQAALKG"
     gene            complement(1790..2695)
                     /locus_tag="QEL58_003767"
     CDS             complement(1790..2695)
                     /locus_tag="QEL58_003767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012443706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartyl/asparaginyl beta-hydroxylase
                     domain-containing protein"
                     /protein_id="HDS1678193.1"
                     /translation="MIKIVIAALFVACVLYIHFRGKVRARWSRQLLDHSSFMAPINVV
                     MYMFSKVPTTPFLDPAKEFPQLEPLRQNWQMIRDEALALRDAQKIAASSTFNDAGFNS
                     FFRRGWKRFYLKWYGPSHPSAKAMCPKTTALLESLPDVRAAMFAQLPSGSELRPHRDP
                     FAGSLRLHLGLATPNNDGCYIEVDGIKKSWRDGEWMMFDETYIHHAHNETPDDRVILF
                     CDIARPLHFGLPGLFNRAVAATLLAGGASPNLPGDPTGGVNKAFGSVYKVRLKAKALR
                     ERSVVAYQLIKWGLVVAVIAGIWAL"
     gene            3131..3790
                     /locus_tag="QEL58_003768"
     CDS             3131..3790
                     /locus_tag="QEL58_003768"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014038781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="kinase"
                     /protein_id="HDS1678194.1"
                     /translation="MYLPALPPSSCGDDAAAPLLLKRGKRFLAPDVYRTCLDGREAVI
                     KDYSRYRGTPVSLIARLMVRREARMLQRLGGWKHAPALLGTLGGLALGMEFIPGQTLS
                     TAQAVGNDVFEQLQHALSRLHAAGITHNDLHGTNVVVSGGVPVLLDFTSAWRVPRWLR
                     RGPLSRQMRRSDMKNLLKIRQRVTGQAPSAAQAALVADPGWVAAVRQGWKRFYRWAKR
                     R"
BASE COUNT          703 a         1303 c         1223 g          635 t
ORIGIN      
        1 ccggcgccca gcgaggccag gcgcatgcgc acgcccaggc ccggcttcac gtccagcgcc
       61 ttggactctt ccagcaccag cttcagctcg gacggcttct cgatgacgat gaaagtctgc
      121 aggcccagct tgcggccgat cagggccagg cggatgtact cgcggtcctt gtaaccgttg
      181 cagacgatca ggccacccgg gcgcgacagc gccagcacgg ccatcagctc gggcttgctg
      241 cccgcttcca ggccgaaacc ctcgccatgg tggctggcca gggtgccggc cacgccacgg
      301 gtctggttga ccttgatcgg gtacacggcg gtgtagccgc cactgtattc ccagtcctgc
      361 tgggcctggc cgaaggccgc ctgcagcttg cccaggcgct ggccgaggat gtccgggaag
      421 cgcaccagca gcggcagctt ggcaccggcc gcacgcgccg catcgaccac cttgggcagc
      481 gacaccaccg ggccgtccgc cccggtcggt ctcaccacca tgtgcccggc ctgatccacg
      541 tcgaagtaac cgtccgccca atgcgggatc gagtaggtct tgcgggcttg gtcgagggac
      601 caatcggtca tttcagtcgg ccttgttggc aataaaaggg ggggcatgat aacgcctata
      661 tgcccacagg ttcgttatca tgcgcgcccg cgcccgtgac aggttccaac ctgaacgggc
      721 cgatccgtcc ggatgtggca tctgtgccac gcggccccgc ccgccagccc ggcttcaccc
      781 ctccgaacag gactgttttc caatgactga cagcaacaac tggtacatcg aacacttcga
      841 gcgcaccggc tcggccatcg gctatcgcat caccggcaag ctggacgagg tgcagtcgcc
      901 gttccagaag atcgagatct tccagaccac cgactggggc aacctgatga ccatcgacgg
      961 ggccatcatg ctgaccagca aggacaactt cttctaccac gagatgatca gccacccggt
     1021 gctgttcacc cacgccgcgc ccaagcgcgt ggtgatcatc ggtggcggcg actgcggcac
     1081 cctgcgcgaa gtgctcaagc acaagggcgt ggagagcgtg acccagtgcg atatcgacga
     1141 gcaggtcacg gtgatggcgc gcaagcactt cccggaactg tgcgactcca acgacgacgc
     1201 ccgcgccgag ctgctgttcg acgacggcgt ggcctacatg gccaactgcc cggccggcag
     1261 cgtggacgtg gtgatcgtgg actcgaccga tccggtcggc ccgggcgaag gcctgttcaa
     1321 caaggccttc tacgagagct gcttcaaggc cctgaaggac gacggcatcc tggtgcagca
     1381 gtccgagtcg ccgctgatgc agctggacct gatcaacgaa atgcgcaccg agatgggcaa
     1441 ggccggcttc ggctcgttca agaccctgcc gttcccgcag ccgtgctacc ccaccggctg
     1501 gtggagcgtg accatggcgc gcaagggcga cagcagcttc gacttccgcc aggccgactc
     1561 ggccgccaag accttcaaca ccctgtacta caccgccgcg ctgcacaccg gcgtgctggt
     1621 gaccccgccg ttcgtgcagg cggcgctgaa gggttgatcc aacaaaaaac ccgcgctggc
     1681 aacagcgcgg gtttctgcct tctgtagagt cgagccatgc tcgactgctg ttctgcgggg
     1741 ctactgcaat ctgactgaaa tgcagtcgag catggctcga ctctacaatt cagagcgccc
     1801 agataccggc aatcaccgcc accaccaggc cccacttgat cagctggtag gccaccacgc
     1861 tgcgctcgcg cagtgccttg gccttcagcc gcaccttgta cacgctgccg aacgccttgt
     1921 tgacgccgcc ggtcgggtca cccggcaggt tcggcgaggc accaccggcc agcagcgtgg
     1981 ccgccaccgc gcggttgaac aggcccggca ggccgaagtg cagcgggcgg gcgatatcgc
     2041 agaacaggat cacgcggtca tccggcgtct cgttgtgcgc atggtggatg taggtctcgt
     2101 cgaacatcat ccactcgcca tcgcgccagc tcttcttgat gccgtccact tcgatgtagc
     2161 agccgtcgtt gttgggcgtg gccaggccca ggtgcaggcg cagcgaaccg gcgaacggat
     2221 cgcggtgcgg gcgcagttca ctgcccgacg gcagctgcgc gaacatcgcc gcgcgcacgt
     2281 ccggcagcga ctccagcaac gccgtggtct tcgggcacat cgccttcgcc gacgggtgcg
     2341 acgggccgta ccacttcagg tagaagcgct tccagccacg acggaagaac gagttgaagc
     2401 cagcgtcgtt gaacgtgctg gaggcggcga tcttctgcgc atcgcgcagc gccaatgcct
     2461 cgtcgcggat catctgccag ttctggcgca gcggctccag ctgcgggaac tccttggccg
     2521 ggtccaggaa cggcgtggtc ggcaccttcg agaacatgta catgaccacg ttgatggggg
     2581 ccatgaaact ggagtggtcc agcaactggc gcgaccagcg cgcgcggacc ttgccacgga
     2641 agtggatgta cagcacgcag gccacgaaca gcgctgcaat gacgattttg atgatcaaag
     2701 cactttcctc cagccgcggc cggaacggga aacggggcga tgcacggcct ggcggccagc
     2761 accggtggga agcgcggcag gggacgggga cgtgccggag ggggcggccg ccgatgtcgc
     2821 gggttaacag cttatggtcg gcaggccgtg cgccggggtc aagccgggcg tgtgcggcgt
     2881 tcagctgaac gcggcgaaat ggcccgaaag cgcgcccaac ctgttgatgc ataaagaaca
     2941 tcatcagaag tgagacagaa atgtccgatt tcatgtgacg aactgttcca gccacgaccc
     3001 cgacatttct ccgacaaatc gtcgattagc gaactggtga gtactaaaat taacgaaagc
     3061 ttagtaactt cctgtaacac cggttcgctt gacgctttgc gccacccacc gggtcgaccg
     3121 agaccccgac atgtatctcc ctgcactacc cccctcctcc tgcggcgatg acgccgcggc
     3181 gccgctgctg ctcaagcgcg gcaaacgctt cctcgccccc gacgtctacc gcacctgcct
     3241 ggacgggcgc gaagcggtca tcaaggacta ctcccgctac cgcggcaccc cggtttcact
     3301 gatcgcccgg ctgatggtgc gccgtgaagc gcgcatgctg cagcgcctcg gcggctggaa
     3361 acacgcaccg gccctgctcg gcaccctcgg tggcctggca ctgggcatgg aattcattcc
     3421 cggccagacc ctcagcaccg cccaggccgt cggcaacgac gtgttcgagc agctgcagca
     3481 cgcgctcagc cgcctgcacg cggccggcat cacccacaac gacctgcatg gcaccaacgt
     3541 ggtggtcagc ggcggcgtgc ccgtgctgct ggacttcacc tcggcctggc gcgtaccccg
     3601 ctggctgcgc cgcggcccgc tgagccggca gatgcgccgc agcgacatga agaacctgct
     3661 gaagatccgc cagcgcgtga ccggacaagc gccgagtgcc gcgcaggccg cgctggtggc
     3721 cgacccggga tgggtggcgg cggtgcgtca gggctggaag cggttctaca ggtgggccaa
     3781 gcgccgctga atgcttttct ttggtagggg tcgagcttgc tcgaccgctc taccgctctt
     3841 tgtagagtcg agcttgctcg actg
//
LOCUS       DAOKIP010000290         3831 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.294,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000290 DAOKIP010000000
VERSION     DAOKIP010000290.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 3831)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3831)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3831
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.294"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            137..2539
                     /locus_tag="QEL58_003769"
     CDS             137..2539
                     /locus_tag="QEL58_003769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012512375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDS1678195.1"
                     /translation="MHRSKLSRSILLALSMASAGGAIAAEADAVDASAGSRAAPTQLD
                     AMLVTGTRASNRTQFETLAPVDVFTKEDIKSVESTDLKDVLAQLVPSFVVQRLPMADG
                     QVFVRPATLRGLSPDQTLVLVNGRRFHRSALLGNRGAQAADLAQIPTSAIKRIEVLRD
                     GASAQYGSDAIAGVINIILEDGPGTEITAGYSQYAQGDGASRDFSARTGWSLGDYGSL
                     VLFAESSNSDATSRTRQRPDAIAFQAAHPDLDVPNPVQRWGQPDLESRRVGFNVKANA
                     SDTLELYAFGLYSHSDGVSDFNWRNPDTTTGAYRTTTIFPGWNLRSIYPVGFSPQYGN
                     VQNDLQLVGGLRGEITPKLRWDVSASYGRNAIDYSLKNSINASLGPASPTAFDLGRLT
                     QTEKNANADFNYEWDVAALAKPINVAFGGEFRQETYQVRAGDPASYAVGPGAAAGLEA
                     NSNGAPGFSASQAGQWSQRSKAAYVDMEVPLGERWSIGAASRYEDFSSFGSTLDGKLS
                     ARFAITPDVALRGTVSTGFRAPTPAQLNTTSTTQGLDTRTLQIFTSGRLSPNDPLAQL
                     LGAKPLKPEESRTASLGLTWRTDLGLSGSVDVYQIKLTDRFSQSASFAIPAGTPNPLG
                     YTSVNYFTNDFDTTTTGVDVVGNYLRDLGAGRMTLTLAYNYNRTRVNNGSTSVATNET
                     QRVLFEDRLPEHKGSLTGSWDIGAWSLMARMRYYGAWTDSSGNAVGDIYQRFGAMSFL
                     DLAVGYRINEHHSLRVGADNVFDRYPDEATFQASRGLVYSRNAPYDTDGANLYAQYRL
                     SF"
     gene            2539..>3831
                     /locus_tag="QEL58_003770"
     CDS             2539..>3831
                     /locus_tag="QEL58_003770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005414765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HDS1678196.1"
                     /translation="MDRTRRSLLRAGTLLPAAAVLPSLPAQAAARYAGPMEIPAKTVA
                     PEELAHDETYWSAVASHFDITDEVNHLENGYWGAMGRETLASYQRHTAEVNRGNAWYG
                     RREFPAQYMAVQRQVAEMLGVAADEIALTRGATEAMLALIGGYNRLQPGDQVLYADID
                     YDSMIGAMRWLQQRRGAQVERIALPAVPDHAQILQAYEAAFARLPRLRLVLLTQVSHR
                     HGLVLPVAEIAERARARGIDVIVDAAHGFGQIDYAVPDLKADFVGINLHKWIGAPVGV
                     GAMYVRKGRVADLDPYMGETDDGRVGSRVHTGTVNFAAYLALPEAIALHQRIGAANKQ
                     ARLRYLRERWTEPARQMAHIEVLSSPDPALASALASFRLRGRTSTADNIALQKRLLDE
                     HRVFTTHRDGLDSGACVRVTPSVFTRPEQMDALVKALAA"
BASE COUNT          642 a         1340 c         1241 g          608 t
ORIGIN      
        1 caacctgggt tggcgcatca agctgtcgta ctcacgtcat ggctccttca cagatcgcgc
       61 cgagactgcg cgccttgtcc agccctgttg tgcctgcgca ggtgctggcc ctgtcgtgtc
      121 tttccggagc cctgccgtgc atcgttcgaa gctttcgcgt tccatcctcc ttgccctttc
      181 catggccagc gcaggaggcg cgatcgcagc ggaggccgat gcggtcgatg cctcggcagg
      241 cagccgcgcg gcgcccaccc agctcgatgc gatgctggtc accggcaccc gcgcctccaa
      301 ccgcacccag ttcgaaacgc tggcgccggt ggatgtattc accaaggaag acatcaagtc
      361 ggttgaatcc accgatctga aggacgtgct ggcccagctg gtgccgtcgt tcgtggtgca
      421 gcgcctgccg atggccgacg gccaggtgtt cgtgcgcccg gctaccctgc gtggcctgtc
      481 gccggaccag acactggtgc tggtcaacgg ccgccgtttc caccgcagcg cgttgctggg
      541 caaccgcggt gcgcaggcgg ccgatctggc gcagattccg accagcgcga tcaagcgcat
      601 cgaagtgctg cgcgatggtg cctcggcgca gtacggctcg gacgccatcg ccggcgtcat
      661 caacatcatt ctcgaggatg gccccggcac cgagatcacc gctggctatt cgcagtatgc
      721 gcagggcgac ggtgcctcgc gcgacttcag tgcgcgcacc ggctggtcgc tgggtgacta
      781 cggcagcctg gtgctgttcg ccgaatcgtc caattccgat gcaacctcgc gcacccgcca
      841 gcgcccggat gccatcgcct tccaggccgc gcatccggac ctggacgtgc ccaacccggt
      901 gcagcgctgg ggccagccgg accttgaaag ccgccgtgtc ggcttcaacg tcaaggccaa
      961 cgccagcgac acgctggagc tctatgcctt cggcctgtac agccacagcg acggcgtcag
     1021 cgatttcaac tggcgcaacc ccgataccac caccggcgcc taccgtacga ccacgatctt
     1081 ccccggctgg aacctgcgct cgatctatcc ggtgggcttc agcccgcagt acggcaacgt
     1141 ccagaacgac ctgcagctgg tgggtggcct gcgtggcgag atcacgccca aactgcgttg
     1201 ggatgtcagc gcgtcgtatg gccgcaacgc catcgactac agcctgaaga actcgatcaa
     1261 tgcctcgctc ggtccggcca gcccgaccgc gttcgatctc ggccgcctga cccagaccga
     1321 gaagaacgcc aacgccgact tcaactacga gtgggacgtg gccgcgctgg ccaagccgat
     1381 caacgtcgcc ttcggtggcg agttccgcca ggagacctac caggtgcgcg ccggtgatcc
     1441 agcgtcgtac gcggtcggcc cgggtgcagc tgctggcctg gaagccaatt ccaacggcgc
     1501 gccgggcttc tcggccagtc aggccggaca gtggagccag cgcagcaagg cggcctatgt
     1561 ggatatggag gtgccgctgg gcgagcgctg gagcatcggc gcggccagtc gctatgaaga
     1621 cttctccagc ttcggcagta cgctggacgg caagctctcg gcgcgctttg cgatcacccc
     1681 ggacgtggcc ctgcgcggta ccgtgtccac cggcttccgt gcaccgaccc cggcgcagct
     1741 caacaccacc agcaccacgc agggcctgga cacgcgcacg ctgcagatct tcaccagcgg
     1801 ccgcctgtcg ccgaatgatc cgctggccca gttgctcggt gccaagccgt tgaagccgga
     1861 ggaatcgcgt accgcctcgc tgggcctgac ctggcgcacc gacctgggcc tgtccggctc
     1921 ggtggatgtg taccagatca agctcaccga ccgcttcagc cagtcggcca gcttcgccat
     1981 tccggccggc acgcccaacc cgctgggcta cacctcggtg aactacttca ccaacgactt
     2041 cgacaccacc accaccggcg tggacgtggt cggcaactac ctgcgcgacc tcggcgcggg
     2101 ccgcatgacg ctgaccctgg cctacaacta caaccgtacc cgcgtgaaca acggcagcac
     2161 ctcggtggcc accaacgaga cccagcgcgt gctgttcgaa gaccgcctgc ccgagcacaa
     2221 gggcagcctg accggcagct gggacatcgg cgcctggtcg ctgatggcgc gcatgcgcta
     2281 ctacggcgcc tggaccgact ccagcggcaa cgccgtgggc gacatctacc agcgtttcgg
     2341 cgcgatgagc ttccttgacc tggccgtggg ctaccgcatc aacgaacacc acagcctgcg
     2401 cgtgggcgcc gacaacgtgt tcgaccgcta cccggatgag gccaccttcc aggccagccg
     2461 tggcctggtc tattcgcgca acgcgccgta cgacaccgat ggcgccaacc tctacgcaca
     2521 gtaccggttg agcttctgat ggaccgtacc cgtcgttccc tgctgcgtgc cggcaccttg
     2581 ctgccggccg ccgccgtgct gccttcactg cctgcccaag cggccgcgcg ctacgctggg
     2641 ccgatggaga ttcctgcgaa gaccgtggca ccggaagagc tggcccacga tgaaacctac
     2701 tggtccgcgg tggccagtca cttcgacatc accgacgaag tgaaccacct ggagaacggc
     2761 tactggggtg cgatggggcg cgagacgctg gccagctacc agcgccacac cgccgaggtg
     2821 aaccgtggca atgcgtggta tggccgccgt gaattcccgg cgcagtacat ggcggtgcag
     2881 cggcaggtgg ccgaaatgct gggcgtggcg gccgacgaga tcgcgctgac ccgcggcgcc
     2941 accgaggcga tgctggccct gatcggcggc tacaaccgcc tgcagcccgg tgaccaggtg
     3001 ctgtacgccg acatcgacta cgacagcatg atcggcgcga tgcgctggct gcagcagcgt
     3061 cgcggcgcgc aggtggagcg catcgcactg ccggcagtgc cagaccacgc gcagatcctg
     3121 caggcctacg aggccgcgtt cgcgcgcctg ccgcggctga ggctggtgct gctgacccag
     3181 gtcagccacc gccacgggct ggtgctgccg gtggcggaaa tcgccgagcg tgcgcgggcg
     3241 cgcggcatcg atgtgatcgt cgatgcggcg cacggcttcg gccagatcga ctatgcggtg
     3301 ccagacctga aagccgactt cgttggcatc aacctgcaca aatggatcgg tgcaccggtc
     3361 ggcgttggcg cgatgtacgt gcgcaagggc cgcgtggcgg atctggaccc gtacatgggc
     3421 gagaccgacg atggccgcgt gggcagccgg gtgcacaccg gcacggtcaa cttcgccgcc
     3481 tacctggcac tgccggaagc gatcgcattg caccagcgca tcggtgcggc caacaagcag
     3541 gcgcgcctgc gctacctgcg cgagcgctgg acagagccgg cacggcagat ggcgcatatc
     3601 gaagtgctgt cctcgccgga cccggcgctg gccagtgcgc tggccagctt ccgcctgcgc
     3661 gggcgcacca gcacggccga caacatcgcg ctgcagaagc gcctgctgga tgagcatcgg
     3721 gtgttcacca cgcaccgcga cgggcttgat tccggcgcct gcgtacgggt gacgccgtca
     3781 gtgttcaccc ggccggagca gatggatgca ttggtgaagg ctttggcggc a
//
LOCUS       DAOKIP010000291         3830 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.295,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000291 DAOKIP010000000
VERSION     DAOKIP010000291.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 3830)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3830)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3830
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.295"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(177..524)
                     /locus_tag="QEL58_003771"
     CDS             complement(177..524)
                     /locus_tag="QEL58_003771"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010484090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phasin family protein"
                     /protein_id="HDS1678197.1"
                     /translation="MAAAFSDRFSDATRQLAAAATRANRLALENAESMFGVQLKALER
                     NLTATGGWLGELARSDDAAGMFSKGTQLWQDNLQRLGQAQQDVVGLGLQAGKAWSELV
                     QGYNESSADANSH"
     gene            complement(640..1002)
                     /gene="queD"
                     /locus_tag="QEL58_003772"
     CDS             complement(640..1002)
                     /gene="queD"
                     /locus_tag="QEL58_003772"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004141227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-carboxytetrahydropterin synthase QueD"
                     /protein_id="HDS1678198.1"
                     /translation="MEIFKVFMLEAAHRLPNVPPGHKCARLHGHSFRVELKVEGEPGA
                     QTGWIMDFGDVKAAFQPIYERLDHHYLNDIPGLENPTSENLAVWIWNELKPSLPALSE
                     ITVHETCTSGCRYRGPAI"
     gene            1196..>3830
                     /locus_tag="QEL58_003773"
     CDS             1196..>3830
                     /locus_tag="QEL58_003773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012509955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDS1678199.1"
                     /translation="MPKHTLLVAALAVALAAPLSAAAESSADASGEASTLAAVRVTGS
                     NIKRTDTEASNPVQVIGRQQLEQTGKATVADVLRSISANTGNASNETTNNGWASGSAG
                     IGLRGLSQKNTLVLLNGRRLANYGFPAGGLSDTFVDLNALPLVAVERIEVLKDGASAV
                     YGSDAVAGVVNIITRQNFEGAEIGGSFGGADQGGLHEQNLKFVGGLGDLDTDGYNILF
                     SLQGYNRERLDQDERNLTRSGIYTDKPGGRWNGWSAKGARYLVNGVSVPMLDANGNCP
                     TGTTRVASAPIDGLAGDTCGFNQAPFTTLIPSTKRYQAYANGTFRLNDNVEAFGEVLY
                     SQIKSTAWFGSSPFFTLESGRFALNADSGLAEPVSSLLPANNPYNPYGRAIPIEYTFF
                     DLGGTLKTNRSTAYRGVFGLRGTTAKWDWEVAAFGARSSERESVSGGFANRWALADAL
                     ATGSYNLLNPAATPQSVRDAINIATLRPAESKLQGIDAKISGSLGHTWAGEIGFAAGA
                     EWRREKLDSNNPWQIDAGLQVRPAIAEVHGQRQVSAAYAEVNVPLASTLELSAAARAD
                     HYDDFGNAFSPKLGLRWQPLDVLLVRASASKGFRAPSLSENSNSTSIAYGSVVDPRDP
                     DVPGSRQNPTFFTVGNNALKPERTKSVNFGVVLSPWANTNLSVDYYRIQLDNLVGTNN
                     TQTLVNDNVAGAVQRDERGKLQAVYNRYQNLSELKTSGIDVELRQRIPTAALGDFTVS
                     SAYTHVRDYRRPTVVGGPLVDYAGSNLGATLPKDKATTTLDWKHGDFNAAVTWYYTSS
                     YRQEASTAAKAVQQRVGSYSQYDLYLAYTGVDKLTVYAKVQNLADKTPPYDASFPGIR
                     APYDFSQYDLRGRYFTLGFDYR"
BASE COUNT          686 a         1324 c         1196 g          624 t
ORIGIN      
        1 ggacatttgc ccaagcccct gcccaccccg gcggggccct tcagctcgca gagagtccag
       61 actaagaagt gcctcggaat ccaaacgtca ggcaaaaaaa gacccggcag agggagggat
      121 ctgccgggtc cggattgcat ggggggaggg acccatgcaa tgagcgttgc gtcgcgtcag
      181 tggctgttcg cgtccgcgct tgattcgttg tagccctgca ccagttcgga ccaggccttg
      241 ccggcctgca ggccgaggcc gaccacgtcc tgctgggcct ggcccagccg ctgcaggttg
      301 tcctgccaca gctgcgtgcc cttgctgaac attccggccg cgtcatcgct gcgggccagt
      361 tcacccagcc agccaccggt cgcggtcagg ttccgctcca gcgccttcag ctgcacgccg
      421 aacatgcttt cggcgttctc caacgccaac cggttcgcgc gcgttgccgc ggcggcgagc
      481 tggcgggtgg catcactgaa gcgatcgctg aaggcggcgg ccatgggcat cagagcgtga
      541 cttgatgcaa tgcagcatac gccgttgatg ccgcattgca acaaaaataa caaaggcgcc
      601 cacggcgcct ttgaaaaacc tttcagatca atgctttgat cagatggccg ggccgcggta
      661 gcggcagccg gaggtacagg tctcgtgcac ggtgatctcg ctcagcgccg gcaggctggg
      721 cttgagctcg ttccagatcc acaccgccag gttctcgctg gtcgggttct ccaggccggg
      781 gatgtcgttg aggtagtgat ggtccaggcg ctcgtagatc ggctggaatg ccgccttcac
      841 gtcaccgaaa tccatgatcc agcccgtctg cgcgccgggc tcgccctcga ccttcagttc
      901 cacccggaac gagtggccgt gcaggcgcgc gcacttgtgc cccggcggca cgttggggag
      961 gcggtgcgcc gcctcgagca tgaagacttt gaagatttcc atggcggcga ttgtacgccg
     1021 cggctgtcgc ctctggccgg gtggatgttg gttgctcgtg aagaaactct tttcatccgg
     1081 atgaagagat gatagtttct cttatatccg tatgaagaga tgttattggc cggaccccgg
     1141 ccaggcatgg actactgcgg aacttcgtcg tccttaccac ctcccccaca tcgtcatgcc
     1201 caagcacacc ctgctcgtgg cggccctggc cgtcgctctg gccgcgcctt tgtccgccgc
     1261 cgccgaatcc tccgccgatg ccagtggcga agccagcacg ctggccgccg tgcgcgtcac
     1321 cggttccaac atcaagcgca ccgataccga agcctccaac ccggtgcagg tgatcggccg
     1381 ccagcagctg gaacagaccg gcaaggccac cgtggccgat gtgctgcgct cgatctcggc
     1441 caataccggc aacgccagca acgaaaccac caacaacggc tgggcctccg gctcggctgg
     1501 catcggcctg cgtggcctgt cgcagaagaa cacgctggtg ctgctcaacg gccgccgcct
     1561 ggccaactac ggcttcccgg ccggtggcct gtccgacacc ttcgtcgacc tcaacgcgct
     1621 gccgctggtc gcagtggagc gcatcgaagt gctcaaggac ggcgcctcgg ccgtctacgg
     1681 ctccgatgcg gtggctggcg tggtcaacat catcacccgg cagaacttcg aaggcgccga
     1741 gatcggtggc agcttcggcg gcgccgacca gggcggcctg cacgagcaga acctgaagtt
     1801 cgtcggcggc ctcggtgatc tcgacaccga tggctacaac atcctgttca gcctgcaggg
     1861 ctacaaccgc gagcgcctgg accaagacga acgcaacctg accaggagcg gcatctacac
     1921 cgacaagccg ggcggccgct ggaacggctg gtcggccaag ggcgcgcgct acctggtgaa
     1981 cggagtgtcg gtgccgatgc tcgatgccaa cggcaactgc ccgaccggca ccacccgcgt
     2041 tgccagcgcg ccgatcgacg gcctggccgg cgatacctgc ggtttcaacc aggcgccgtt
     2101 taccaccctg attccgtcga ccaagcgcta ccaggcctac gccaacggta ccttccgcct
     2161 gaacgacaac gtcgaagcct tcggcgaagt gctgtacagc cagatcaaga gcaccgcgtg
     2221 gttcggcagc agcccgttct tcactctgga aagcgggcgc ttcgcactga acgcggacag
     2281 tggcctggcc gagccggtgt cgtcgctgct gccggccaac aatccgtaca acccgtacgg
     2341 ccgcgcgatc ccgatcgagt acaccttctt cgaccttggc ggcaccctca agaccaaccg
     2401 ttccaccgcc tatcgcggcg tgttcggcct gcgtggcacc accgcgaagt gggactggga
     2461 agtggccgcg ttcggggcgc gcagcagcga gcgcgagagc gtgtccggtg gcttcgccaa
     2521 ccgctgggcg ctggccgatg cactggccac cggcagctac aacctgctca acccggcagc
     2581 cacgccgcag tcggtgcgtg atgcgatcaa catcgccacc ctgcgtccgg ccgagtccaa
     2641 gctgcagggc atcgacgcga agatttccgg cagcctgggc cacacctggg ccggtgagat
     2701 aggcttcgcc gccggtgccg agtggcggcg cgagaagctg gactccaaca atccgtggca
     2761 gatcgatgcc ggcctgcagg tgcgcccggc catcgccgaa gtgcatggcc agcgccaggt
     2821 cagtgccgcc tacgccgaag tgaacgtgcc gctggcctcg acgctggagt tgtcggcggc
     2881 cgcacgtgcc gaccactacg atgacttcgg caatgcgttc tcgccgaagc tcggcctgcg
     2941 ctggcagccg ctggacgtcc tgctggtgcg tgcctcggcg tcgaagggct tccgcgcgcc
     3001 gtcgctgtcg gagaactcca acagcaccag catcgcctac ggcagcgtgg tggatccgcg
     3061 tgacccggac gtgcccggtt cgcgccagaa cccgaccttc ttcaccgtcg gcaacaatgc
     3121 actgaagccg gagcgtacca agagcgtgaa cttcggcgtg gtgctgtcgc cgtgggccaa
     3181 caccaacctg agcgtggact actaccgcat ccagctggac aacctggtcg gcaccaacaa
     3241 cacccagacc ctggtcaacg acaacgtggc cggtgccgtg cagcgcgacg agcgcggcaa
     3301 gctgcaggcg gtctacaacc gctaccagaa cctgagcgag ctgaagacct cgggcatcga
     3361 tgtcgagctg cgccagcgca tcccgaccgc agcgctgggt gacttcaccg tgtcttcggc
     3421 ctacacccac gtgcgtgact accgtcgccc gaccgtggtc ggcggcccgc ttgtcgacta
     3481 cgccggcagc aacctcggcg cgaccctgcc caaggacaag gccaccacca cgctggactg
     3541 gaagcatggc gacttcaacg cggcggtgac ctggtactac accagcagct accgccagga
     3601 agccagcacc gcggccaagg ccgtgcagca gcgtgtcggc agctacagcc agtacgacct
     3661 gtacctggcc tacaccggcg tcgacaagct caccgtgtac gccaaggtgc agaacctggc
     3721 cgacaagacg ccgccgtacg acgcctcgtt cccgggcatc cgcgcgccgt acgacttcag
     3781 ccagtacgac ctgcgcggcc gctacttcac gctgggcttc gactaccgct
//
LOCUS       DAOKIP010000292         3809 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.296,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000292 DAOKIP010000000
VERSION     DAOKIP010000292.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 3809)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3809)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3809
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.296"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            <1..653
                     /locus_tag="QEL58_003774"
     CDS             <1..653
                     /locus_tag="QEL58_003774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="isochorismatase family protein"
                     /protein_id="HDS1678200.1"
                     /translation="RPVIDPDNAAMLLIDHQSGLFQTIADMPFSSVRAHATALAKMAT
                     LARMPVITTASVPQGPNGPLIPEIHGAAPHAQYVARKGEINAWDNPEFVAAVKATGRR
                     QLIIAGTITSVCMAFPSIAAVADGYQVFAVIDASGTYSKMAEEITLARVVQAGVVPMD
                     TAAVASEIQRSWNRDDAQQWAEVYTRIFPNYQLLIESYLKAQDVQKNHEPLDSQRS"
     gene            715..1113
                     /locus_tag="QEL58_003775"
     CDS             715..1113
                     /locus_tag="QEL58_003775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005413631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HDS1678201.1"
                     /translation="MAYARIVSTGDNYLHHISNGSFDVDADEPATLGGQGKGFAPFDL
                     YLASLAACTAITLRMYTQRKGWELGEFHAELRSERDEDGRFHVHRVLHASAELSDAQW
                     QRLLEVVERTPVTLVMREGARITSERGAAA"
     gene            complement(1176..1505)
                     /locus_tag="QEL58_003776"
     CDS             complement(1176..1505)
                     /locus_tag="QEL58_003776"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005416760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1678202.1"
                     /translation="MSRRKLFESPEPSSQLLGIGPAYVSVEGLRQHLAEFLLYAGRPV
                     VIMRGRSEVGYFLPARCWRQRDDDPLAAAAADQLLDAAGFQAEDIQQVEQEFNAMRQR
                     TVLHSRR"
     gene            complement(1604..3349)
                     /locus_tag="QEL58_003777"
     CDS             complement(1604..3349)
                     /locus_tag="QEL58_003777"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005416761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative porin"
                     /protein_id="HDS1678203.1"
                     /translation="MNDHDRARTDSRRPRPARRALLCCAVLLSLAAPAGAMAAETTMV
                     KLIKGLIASGALKPEDGQALLVQAEAEAAAAQRTAASGSSAASGGVALEAGDVRVPYV
                     PQSVRDGIRDEVRQDVMAQAKSEGWAAPNEVAEWTKRIKVTGDMRVRSESRFYSERNS
                     DIVSNWPAINSGNGFDTNTNTNLQLPPLLNSRQDRRNLWRIRARLGIEATIGQHTTAG
                     VRLASGSSNGPVSTTEQLGGGLSKKDVWLDQAWLAYSPADWVTVRGGRFGNPFWTSDT
                     LFSNDLNFDGLAANLKYDFDGGDLDLFGNLAVVPLEYTSDSSPSQSRVKTPNENKWLS
                     GAQVGVNWRFNDDNALRAALGYYDFKNISGRLSSPCALYAGAVGCDTDWSRPAFMQKG
                     NTLMLIRDIARNPLDPANTPTPQYVGLASAFRLATLNLRWDTQLAQGIGLRLDGDYIR
                     NLAYDKQAMFNRANNGIVNNYDAGGTASINTFRSGDTAWMVQATFGATELREKGQWQA
                     LLGYKHIEADALPDAYNDPNFHLGGTNARGYYVGGAYALDARSWISGKWMAAKEVSGA
                     PLSIDVFQLEFNTGF"
     gene            complement(3392..>3809)
                     /locus_tag="QEL58_003778"
     CDS             complement(3392..>3809)
                     /locus_tag="QEL58_003778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005413633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TonB family protein"
                     /protein_id="HDS1678204.1"
                     /translation="AEEPTPTPDNADPVTMNADAQAGGDNFGIQSGTGGGTSGVGRGG
                     AGNATYGRYLGYLMQQAIARDDKVKRLAFQLQVNVWLAADGRLEKVELVRGSGNEEAD
                     AAVLDALRRIGKVDQAPPPSLDFPARVLIQGRRPGA"
BASE COUNT          610 a         1285 c         1259 g          655 t
ORIGIN      
        1 cccgcccggt gatcgatccg gacaacgccg cgatgctgct gatcgaccac cagagcggcc
       61 tgttccagac catcgcagac atgccgttca gcagcgtgcg cgctcacgcc actgcactgg
      121 cgaagatggc cacgctggcc cggatgccgg tgatcaccac cgcctcggtg ccgcagggcc
      181 cgaatggccc gctgatcccg gagatccacg gcgcggctcc gcatgcgcag tacgtggcgc
      241 gcaagggtga gatcaacgcc tgggacaatc ccgaattcgt tgccgcagtg aaggccactg
      301 gccgcagaca gctgatcatc gccggcacca tcaccagcgt gtgcatggcc ttcccgtcga
      361 tcgccgccgt cgccgacggc taccaggtgt tcgcggtgat cgatgcctcg ggcacctatt
      421 cgaagatggc cgaggagatc accctggcgc gcgtggtaca ggccggcgtg gtgccgatgg
      481 acaccgccgc ggtggcctcg gagatccagc gcagctggaa ccgcgacgat gcgcagcagt
      541 gggccgaggt ctacaccagg atcttcccga actaccagct gctgatcgag agttacctga
      601 aggcgcagga cgtgcagaaa aaccacgagc cgctggattc gcagcgcagc tgagcgcgca
      661 aggcggtaga gtccaacgcg tcgggcatgg cccgacgcta cagaggagat ccgcatggcc
      721 tacgcacgca ttgtttcgac cggcgacaac tacctgcacc acatcagcaa tggcagcttc
      781 gatgtcgatg cggacgagcc cgcaacgctt ggcggccagg gcaagggctt cgccccgttc
      841 gacctgtacc tggcctcgct ggcggcctgc accgccatca ccctgcgcat gtacacgcag
      901 cgcaagggct gggaactggg tgagttccat gccgaactac gctccgagcg tgacgaggac
      961 gggcgcttcc acgtgcaccg cgtcctgcat gccagcgcgg agctgagcga tgcacagtgg
     1021 cagcgcttgc tggaggtagt ggagaggacc ccggtgaccc tggtgatgcg cgagggtgca
     1081 cgcatcacca gtgagcgcgg ggctgcggcg taaccccatc cgcgcatggc gtggatctac
     1141 tgtagagccg agcatggccc ggctctacag acagctcagc gccgtgaatg cagcacggtg
     1201 cgctggcgca tggcgttgaa ctcctgctcc acctgctgga tgtcctcggc ctggaaaccg
     1261 gccgcatcca gcagctggtc ggcagccgcc gccgccagcg gatcgtcatc gcgctggcgc
     1321 cagcagcgcg ccggcaggaa gtagcccact tcgctgcgcc cgcgcatgat caccaccggc
     1381 cggccggcat acagcaggaa ctccgccaga tgctggcgca gcccttccac cgatacatag
     1441 gcaggcccga tgcccagcaa ctggctggac ggttcaggac tttcaaacag cttgcgacgg
     1501 ctcatccact cctcctttcg tgcaacgcgt ggtctccttt ccttagacgg gcgcatcgct
     1561 gcgcccccgc cacgcccggc gtgatctgca tcacgcgatc cgactagaag ccggtattga
     1621 actccagctg gaacacgtcg atcgacagtg gcgcaccgga cacttccttg gccgccatcc
     1681 acttgccgct gatccagctg cgcgcatcca gcgcgtaggc accgcccacg tagtagccgc
     1741 gggcattggt gccgcccagg tggaagttgg ggtcgttgta ggcatccggc agcgcatcgg
     1801 cctcgatgtg cttgtagccc agcagtgcct gccactggcc cttctccctc agctcggtgg
     1861 caccgaacgt ggcctgcacc atccacgcgg tatcgccgct gcggaaggtg ttgatgctgg
     1921 cggtgccgcc cgcgtcgtag ttgttgacga tgccattgtt ggcgcggttg aacatcgcct
     1981 gcttgtcgta ggccaggttg cggatgtagt caccgtccag gcgcagcccg ataccctgcg
     2041 ccagctgcgt atcccagcgc aggttcagcg tggccaggcg gaatgccgag gccaggccga
     2101 cgtactgcgg ggtgggcgtg ttggccgggt ccagcggatt gcgcgcgatg tcgcggatca
     2161 gcatcagggt gttgcccttc tgcatgaagg ccgggcgcga ccagtcggta tcgcagccca
     2221 ccgcacctgc atacagtgcg cacggcgaag acaggcgacc gctgatgttc ttgaagtcgt
     2281 agtagcccag cgccgcgcgc agcgcgttgt catcgttgaa gcgccagttc acgcccacct
     2341 gcgcaccgga cagccacttg ttctcgttcg gggtcttgac ccggctctgg ctgggtgaac
     2401 tgtcggaggt gtactccagc ggcaccaccg ccaggttgcc gaacaggtcg aggtcaccgc
     2461 cgtcgaagtc gtacttcagg ttggcggcca ggccgtcgaa gttcaggtcg ttggagaaca
     2521 gcgtatcgct ggtccagaac ggattgccga agcggccacc gcgcaccgtc acccagtccg
     2581 ccgggctgta ggccagccag gcctggtcca gccacacatc cttcttgctc aggccgccgc
     2641 ccagctgttc ggtggtcgac accgggccgt tgctgctgcc gctggccagg cgcacgccgg
     2701 cggtggtgtg ctggccgatg gtcgcttcga tgcccaggcg ggcacggatg cgccacaggt
     2761 tgcggcggtc ctggcggctg ttcaacagcg gcggcagctg caggttggtg ttggtgttgg
     2821 tatcgaagcc attgccggaa ttgatcgccg gccagttgct cacgatgtcg ctgttgcgct
     2881 cggaatagaa gcgcgattcg ctgcgcacgc gcatgtcacc ggtgaccttg atgcgcttgg
     2941 tccattcggc cacttcgttc ggcgccgccc agccttccga tttcgcttgc gccatcacat
     3001 cctggcgcac ttcgtcacgg atgccgtcgc gcacgctctg cggcacgtaa ggcacgcgca
     3061 cgtcgccggc ttccagggcc acgccgccgc tggcagccga actaccgctg gcggcggtgc
     3121 gctgtgcggc ggccgcttcg gcttcggcct gcaccagcag cgcctggccg tcttcgggtt
     3181 tcagcgcgcc gctggcgatc aggcccttga tcagcttgac catggtggtt tctgcggcca
     3241 tcgcaccggc cggggccgcc aggctgagca gcacggcgca gcacagcagc gcccgtcggg
     3301 ccggccgcgg gcggcgggag tcggttcgtg cgcggtcgtg gtcgttcatc acggttctca
     3361 tcgaaagagt ggaaatcacg gaagtcggga atcaggcccc gggccggcgg ccctggatca
     3421 ggacgcgggc ggggaaatcg agcgacggcg gcggtgcctg gtcgaccttg ccgatgcgac
     3481 gcagcgcatc gagcacggcc gcatcggcct cctcgttgcc actgccgcgc accagctcga
     3541 ccttttccag gcggccatcg gcggccagcc acacattcac ctgcagctgg aacgccaggc
     3601 gcttgacctt gtcgtcgcgc gcgatcgcct gctgcatcag gtagccgagg tagcggccgt
     3661 aagtggcatt gccggcacca ccgcggccca cgccggacgt gccgccgcct gtaccggact
     3721 ggataccgaa gttgtcaccg ccggcctgtg cgtcggcatt catcgttacc gggtcggcgt
     3781 tgtccggggt tggcgtcggt tcttccgcc
//
LOCUS       DAOKIP010000293         3796 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.297,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000293 DAOKIP010000000
VERSION     DAOKIP010000293.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 3796)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3796)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3796
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.297"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(30..1007)
                     /locus_tag="QEL58_003779"
     CDS             complement(30..1007)
                     /locus_tag="QEL58_003779"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012480525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HDS1678205.1"
                     /translation="MRAAQYASFADPADVLAVADVALPEPGPGEVRIRTVLASIHNHD
                     LLTVRGLYGYKPTLPAIAGSEALGVVDALGEGVEGLQIGQRVAAASVHGTWAEAFIAP
                     ARMVIPMPDAIADEMAAQLIAMPLSALMLLEFLHVEPGQWIVQNTANGAVGKSLAMLA
                     RARGVHVANLVRNADAVAQLQALGIDHVFDTSVDGWKDRVRAATGEAQAAAAVDSIGG
                     DASGDLVDLLGHHGTLVSFGVMSGQPMHIPAGGLIYKEATVKGFWGSKVSQAMAVEDK
                     RRLVGELLKRAAGGELTLPVERVFALDDIAQAAKAAGGSGRNGKVLLRP"
     gene            1440..>3796
                     /locus_tag="QEL58_003780"
     CDS             1440..>3796
                     /locus_tag="QEL58_003780"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012511321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleoside-diphosphate reductase subunit
                     alpha"
                     /protein_id="HDS1678206.1"
                     /translation="MTDNTYRAADLAGAGDALRAGGERVPTWITKEAGNRRLPFDAER
                     LQRSIDTVHAEFPQLDVSDYRRVVQAMVERKPSLSADDLVDLLIREAESRVDLVAPEW
                     EQFAARIYLRRLYKRASRNRFYDVSLKYGSYVGLQESLADRGIYSNDILRCYSKEELQ
                     QAGEMIEPERDRLFAYNGLYLLATRYLASDRSREVYELPQERWLTIALYLMQEEKPRE
                     RRMQLVGEAYWALSNLYMTVATPTLANAGKVGGQLSSCFIDTVDDSLQGIYDSNTDIA
                     RVSKHGGGVGAYLGYVRSSGAPIRGVPNSSGGVVPWIKQLNNTAVSVDQLGQRKGAVA
                     VYLDIWHRDIEAFLDLRLNNGDQRLRAHDVFTSVCVPDLFMEAVERRADWYLFDPHEV
                     KSAKGWYLQDFYDEKRGSGSFRDRYAELVADERISRRTVKAIDLFKRIMLSQLETGNP
                     FLFYRDEVNRKNPNKHAGMVYSSNLCTEILQNMSPTRMIQEIVSGDQIVTTRRAGDFV
                     VCNLSSINLGRAISAPDDLLATDVLERLIPIQVRMLDNVIDLNALPVPQATITNRKYR
                     AIGLGTFGWHHLLAQQAIQWESPDAEQLADRLYERINFLTIQASAQLAKEKGSYPMFA
                     GSDWHNGRYFSDRGYSGADWDSLAREVATHGLRNGWLLAVAPNMSTAQIAGSTASIDP
                     IYSAFYYEEKKDFRRPVAAPGLSLETWPYYEKGAYKVDQFASVRQNARRQRHVDQSIS
                     FNLYVPSTIRASTLLELHLSAWREGLKTTYYVRSNDIDISECEWCA"
BASE COUNT          666 a         1316 c         1222 g          592 t
ORIGIN      
        1 tcggctctac agaaggcaat gccagcccat caaggccgca gcagcacctt gccgttgcga
       61 cccgagccgc ccgcagcctt cgctgcctgg gcaatgtcat ccaatgcgaa gacccgctcc
      121 accggcaggg tcagttcgcc gccggcggcg cgcttcagca gttcgccgac cagccgccgc
      181 ttgtcctcca ccgccatcgc ctggctgacc ttgctgcccc agaagccctt caccgtagcc
      241 tccttgtaga tcaggccacc ggcggggatg tgcatcggct ggccgctcat cacgccgaac
      301 gagaccaggg tgccgtggtg gccaagcagg tcgaccaggt cgccgctggc atcgccgccg
      361 atggaatcga ctgccgccgc tgcctgcgct tcgcccgttg cggcgcgcac gcgatccttc
      421 cagccgtcca ccgaggtatc aaatacgtga tcgatgccga gtgcctgcag ctgcgccacc
      481 gcgtcggcgt tgcgcaccag gttggccacg tgcacgccgc gcgcccgcgc cagcatcgcc
      541 agcgacttgc cgacggcccc gttggcggtg ttctgcacga tccactggcc cggctcgacg
      601 tgcaggaact ccagcagcat cagcgcgctc agcggcatcg cgatcagctg tgcggccatc
      661 tcgtcggcga tggcgtccgg catcggaatc accatgcgcg ccggtgcgat gaacgcttcg
      721 gcccaggtgc cgtgcaccga ggcggcggcc acgcgctggc cgatctgcag gccctcgacc
      781 ccttcgccaa gcgcatcgac cacgcccagt gcctcactac cagcgatggc cggcagggtc
      841 ggcttgtagc cgtacaggcc acgcacggtc agcaggtcgt ggttgtggat cgaggccagc
      901 acggtgcgga tgcgcacctc gccggggccg ggttcgggca gggccacatc ggcaacggca
      961 aggacgtcgg ccgggtcggc gaaggaagcg tactgggcag cgcgcatggg cggtgttccg
     1021 gggaaagtgg aggttgtatc gaactgggga cgcgggcgcg gtcgacaagg cgccgccgct
     1081 gcaacacggc atcctgcgac ggatcgtcgc gtcatgtcgt gattacctca tcttgtgttg
     1141 acggctagga atatccccac tatgttgtgg ccgtcactcc cggtcagccg ccgccgccgg
     1201 acatgcagca aacgtcccgc ggcccgcccc tgaaggcttg ccgtgtcgac gcggccgcca
     1261 tcgcgcggac acaggtcgcc cccacggccc ggataccggc cgcaggcgca ggctcttgcc
     1321 gacgacctga tgatcccgtg cgttggcatc ccaccccgat cgccccgtgc gccggtatcg
     1381 cgtgcagggc tgccacggca tcgacgccgc tgtgcgtgcg agcctggaga cgcaggacca
     1441 tgaccgacaa cacctaccgc gcggccgatc tggctggcgc cggcgacgct ttgcgcgctg
     1501 gcggcgagcg cgtgccgacc tggatcacca aggaggccgg caaccgccgc ctgccgttcg
     1561 acgccgagcg cctgcagcgc agcatcgata cggtgcacgc ggagtttccg cagctggatg
     1621 taagcgacta tcgccgcgta gtgcaggcga tggtcgagcg caagccgagc ctcagtgccg
     1681 atgatctggt cgacctgctg atccgcgagg ccgaatcgcg cgtggatctg gtcgcgccgg
     1741 agtgggagca gttcgccgca cgcatctacc tgcgtcgcct gtacaagcgc gccagccgca
     1801 atcgcttcta tgacgtcagc ctgaagtacg gctcctacgt gggcctgcag gaaagcctgg
     1861 ccgaccgtgg catctacagc aacgacatcc tgcgctgcta ttccaaggaa gagctgcagc
     1921 aggccggcga gatgatcgag ccggagcgcg accgcctgtt cgcctacaac ggcctgtacc
     1981 tgctggctac gcgctacctg gccagcgacc gcagccgcga ggtctatgaa ctgccgcagg
     2041 agcgctggct gaccatcgcg ctgtacctga tgcaggaaga aaagccgcgg gagcggcgca
     2101 tgcagctggt cggcgaggcc tactgggcgc tgtccaacct gtacatgacc gtggccacgc
     2161 cgacgctggc caacgccggc aaggtcggtg gccagctgtc cagctgcttc atcgacacgg
     2221 tggacgacag cctgcagggc atctatgact ccaacaccga tatcgcgcgc gtgtccaagc
     2281 acggtggtgg cgtgggcgcc tatctgggct acgtgcgcag cagtggcgca ccgatccgtg
     2341 gcgtgcccaa ttcctccggc ggcgtggtgc cctggatcaa gcagctcaac aataccgccg
     2401 tctcggtcga ccagctcggc cagcgcaagg gcgcggtggc ggtgtacctg gacatctggc
     2461 accgcgacat tgaagccttc ctcgatctgc gcctgaacaa tggcgaccag cgcctgcgcg
     2521 cgcacgatgt gttcacctcg gtatgcgtgc ccgacctgtt catggaagcg gtcgagcgcc
     2581 gtgccgactg gtacctgttc gacccgcacg aagtgaagag cgccaagggc tggtacctgc
     2641 aggacttcta cgatgagaag cgcggctcgg gcagcttccg cgaccgctat gccgagctgg
     2701 tggccgacga gcgcatcagc cgccgcacgg tgaaggcgat cgacctgttc aagcggatca
     2761 tgctcagcca gctggagacc ggcaacccgt tcctgttcta ccgcgacgag gtcaaccgca
     2821 agaacccgaa caagcacgcg ggcatggtct attccagcaa cctgtgcacc gagatcctgc
     2881 agaacatgag cccgacgcgg atgatccagg agatcgtcag cggcgaccag atcgtcacca
     2941 cccgccgcgc gggtgacttc gtcgtctgca acctgtcctc gatcaacctc ggtcgtgcga
     3001 tcagtgcgcc ggatgacctc cttgccaccg acgtgctgga gcgcctgatc ccgatccagg
     3061 tgcgcatgct cgacaacgtg atcgacctca acgcgttgcc ggtgccgcag gccacgatca
     3121 ccaaccgcaa gtaccgcgcc atcggcctgg gcaccttcgg ctggcaccac ctgctggcgc
     3181 agcaggcgat ccagtgggaa tcgcccgatg ccgaacagct cgccgaccgc ctgtacgagc
     3241 gcatcaactt cctgaccatc caggccagcg cgcagctggc caaggagaag ggcagctacc
     3301 cgatgttcgc tggcagcgac tggcacaacg gccgctactt cagtgaccgt ggctacagtg
     3361 gcgcggactg ggacagcctg gcccgcgagg tcgccacgca tggcctgcgc aacggctggc
     3421 tgctggcggt ggcgccgaac atgagcaccg cgcagattgc tggttccacc gcatcgatcg
     3481 atccgatcta cagcgcgttc tactacgagg aaaagaagga cttccggcgc cctgtggccg
     3541 cgcccggcct gtcgctggag acctggccgt actacgaaaa gggcgcctac aaggtcgacc
     3601 agttcgccag cgtgcgccag aacgcgcggc gccagcgcca cgtggaccag tcgatcagct
     3661 tcaacctgta cgtgccaagc acgatccgcg ccagcacgct gctggagctg cacctgagcg
     3721 cgtggcgcga aggcctgaag accacctact acgtgcgctc caacgacatc gacatcagcg
     3781 aatgcgagtg gtgcgc
//
LOCUS       DAOKIP010000294         3792 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.298,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000294 DAOKIP010000000
VERSION     DAOKIP010000294.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 3792)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3792)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3792
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.298"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..609)
                     /locus_tag="QEL58_003781"
     CDS             complement(<1..609)
                     /locus_tag="QEL58_003781"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005408230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase N-terminal
                     domain-containing protein"
                     /protein_id="HDS1678207.1"
                     /translation="MKLYSKPGACSTADHIALQWTGQPFEVELLNKDTLKGPEFLKIN
                     PAGAVPALVDGDFVLLQNAAIMGYIADSYPQAGLGGDGSPRQRAEATRWLAFVNSDVH
                     PAFSPLFAPGKFIADESQFDAIRAAAHKRLRGLFETADKQLADKPWLAGFRSYADPYF
                     YITLRWAAGTKVDLSGLDNLAAYKARMDADAGVQAALKAEGLT"
     gene            complement(694..1152)
                     /locus_tag="QEL58_003782"
     CDS             complement(694..1152)
                     /locus_tag="QEL58_003782"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004154513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell wall hydrolase"
                     /protein_id="HDS1678208.1"
                     /translation="MKLAWILWLSQLLPQPAADSLCLSTTVYLEARDQTLRGQQAVAE
                     VALRRLDSGLWGDSMCQVVTARKQFAPTIVSPGTQLGNDAAWSEAMNVAFDAERNWAL
                     PAGERREIVPGASHFAALSIASPNWRNAYQVATIGDHTFYKVQNLKPRQS"
     gene            complement(1449..3479)
                     /locus_tag="QEL58_003783"
     CDS             complement(1449..3479)
                     /locus_tag="QEL58_003783"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019300705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent 2,4-dienoyl-CoA reductase"
                     /protein_id="HDS1678209.1"
                     /translation="MSPANESAYPHLFTPLDLGFTQLRNRVLMGSMHTGLEDRARDFP
                     RLAAYFAERAEGGVGLIVTGGFAPNVVGWLKPFGGKLSWPWEVRPHRQLTAAAHQHGA
                     KICLQLLHAGRYAYHPLSVAPSKLKAPINPFTPRALSASGVERHISDYARSAKLAREA
                     GYDGVEVMGSEGYLINEFIAPRTNTRSDRWGGDASQRMRFAVEIVRRIREACGPDFII
                     IYRLSLVDLVEDGSNWQEIVQQAQAIEAAGATIINSGIGWHEARIPTIATSVPRAAFA
                     GVTAKLKPHVTLPLVATNRINMPEVAERILADGGADMVSLARPLLADPHWANKARAGR
                     AEAINTCIACNQACLDHVFENKLASCLVNPRAAHETELVYRPTTTPKKVAVVGAGPAG
                     LACATVAAERGHQVTLFDAHEEIGGQFNVAKRIPGKEEFYETLRYFRHKLTETGVQLR
                     LGTRADAAQLAGFDEVVLATGITPRKVDFPGADHAKVVSYLDVLLGRVEVGANAAIIG
                     AGGIGFDVGEFLSHAGESPSLDPQRWMAEWGVDATFEARGALARPQPEASPRRLWLLQ
                     RSAGKPGARLGKTTGWIHRATLKAKGVRMLGGVEYLGVDDEGLRIRVEGSEQLLPVDH
                     VVICAGQEPNRALQAELQAAGISAQLIGGADVAAELDAKRAIDQGSRVAAAL"
BASE COUNT          570 a         1263 c         1340 g          619 t
ORIGIN      
        1 ggtcaggccc tctgccttca gtgcggcctg cacgccggcg tcggcgtcca tgcgcgcctt
       61 gtaggcggcc aggttgtcca ggccggacag gtcgaccttg gtgccagcgg cccagcgcag
      121 ggtgatgtag aagtacggat cggcgtaact gcggaaaccg gccagccacg gcttgtctgc
      181 cagctgcttg tcagcggtct cgaacaggcc acgcaggcgt ttgtgcgcag cggcgcggat
      241 ggcgtcgaac tggctttcgt cggcgatgaa cttgcccggt gcgaacagcg gcgagaaggc
      301 cggatgcacg tccgaattga cgaaggccag ccagcgggtg gcttcggcgc gctggcgcgg
      361 gctgccgtca ccgccgaggc cggcctgcgg gtagctgtcg gcgatatagc ccatgatggc
      421 ggcgttctgc agcagcacga agtcgccgtc gaccagcgcg ggtaccgcac cggccggatt
      481 gatcttgagg aattccggac ccttcagggt gtccttgttc agcagttcaa cctcgaacgg
      541 ctggccggtc cactgcaggg cgatgtggtc ggcggtggaa caggcaccgg gcttgctgta
      601 cagcttcatg ggaactccag gtgatgcggg cgggaagcgc ccactatccc agagcctgct
      661 ggcgggcggc aacgctgccg ccagcacgga tcgttacgac tgccgtggct tgaggttctg
      721 caccttatag aaggtgtgat cgccgatggt ggccacctgg taggcgttgc gccagttcgg
      781 gctggcgatc gacagcgcgg cgaagtggct ggcaccgggc acgatctcgc ggcgctcgcc
      841 ggccggcagc gcccagttgc gctctgcgtc gaaagcgacg ttcatcgcct cgctccacgc
      901 ggcgtcattg cccagctggg tgccggggga gacgatggtc ggcgcgaact gcttgcgcgc
      961 ggtgaccacc tggcacatcg agtcgcccca caggccactg tcgaggcggc gcagggcgac
     1021 ctcggcgacg gcctgctggc cgcgcagggt ctggtcgcgg gcttccaggt acacggtggt
     1081 gctcaaacac aatgaatcag cggccggctg cggcaacaac tgcgacagcc agagaatcca
     1141 ggccagtttc atataactcc ttgctccgta tgggccgcac ctctcggttc ccgcagcggg
     1201 ggctgcgggg cggggtacga cttggcgtca tggggaggcg gccatcgggg ccgccccgtg
     1261 ggcggcccca aaagaaacga tcaataccga tcgagggggc cgcgccggct caccggaaac
     1321 tggctggtga gcggaaagat ggcgcaaggt aggggggtat agccgaacgc atcatgaatc
     1381 atccggcttg acattcaggt tcggcagggg tgacgaaaat cacattccgc cccccattca
     1441 ggcacgcatc agagcgcggc ggcaacccgg ctgccctggt cgatggcccg tttcgcatcc
     1501 agttcggcgg ccacgtcggc gccgccaatc agctgtgcgc tgatgccggc ggcctgcagt
     1561 tcggcctgca gtgcgcggtt cggctcctgc ccggcgcaga tcaccacatg gtcgaccggc
     1621 agcagctgct cgctgccttc gacgcggatg cgcaggccct cgtcgtccac gccgaggtac
     1681 tcgacgccac ccagcatgcg tacgcccttg gctttcaacg tggcgcggtg gatccagccg
     1741 gtggtcttgc ccagccgcgc ccccggtttg ccggcgctcc gctgcagcag ccacagccgg
     1801 cgcggcgagg cctcgggctg cggccgggcc aacgcgccgc gggcctcgaa ggtggcatcc
     1861 acgccccact cggccatcca gcgctgcggg tccagcgacg gcgattcacc ggcgtggctg
     1921 aggaactcgc cgacatcgaa gccgatgccg ccggcgccga tgatcgctgc attggcgccg
     1981 acttcgaccc ggcccagcag cacgtccagg tagctgacca ccttggcgtg gtcggcaccg
     2041 gggaaatcga ccttgcgcgg ggtgatgccg gtggccagca ccacctcgtc gaagccggcc
     2101 agctgcgcag cgtcggcacg ggtgcccagg cgcagctgca ccccggtttc ggtcagtttg
     2161 tgccggaagt agcgcagggt ctcgtagaac tcttccttgc ccggaatacg cttggccacg
     2221 ttgaactggc cgccgatctc ctcgtgggca tcgaacaggg tgacctgatg gccgcgttcg
     2281 gcggcgacgg tggcacaggc cagcccggcc gggccagcac cgaccacggc caccttcttc
     2341 ggcgtggtgg tcgggcggta gaccagctcg gtctcgtggg ccgcacgcgg gttgaccagg
     2401 cagctggcca gcttgttctc gaacacgtgg tccaggcagg cctggttgca ggcgatgcag
     2461 gtgttgatcg cctcggcgcg gccggcgcgg gccttgttgg cccagtgcgg gtcggccagc
     2521 agtgggcgcg ccagcgacac catgtccgca ccgccatcgg ccaggatgcg ttcggccact
     2581 tcgggcatgt tgatgcggtt ggtggccacc agcggcagcg tcacgtgcgg cttgagcttg
     2641 gcggtgacgc cggcaaaggc cgcacgcggc accgaagtgg caatggttgg aatgcgcgct
     2701 tcatgccagc cgatgccgga attgatgatc gtcgcgcctg cggcctcgat ggcctgtgcc
     2761 tgctgcacga tctcctgcca gttgctgccg tcctcgacca ggtccaccag cgacaggcgg
     2821 tagatgatga tgaagtccgg accgcaggct tcacggatgc ggcgcacgat ctccaccgcg
     2881 aagcgcatgc gctggctggc gtcgccgccc cagcggtcac tgcgcgtgtt ggtgcgcggc
     2941 gcaatgaact cgttgatgag gtagccctcc gagcccatca cttccacgcc gtcgtagccg
     3001 gcctcgcggg ccagcttcgc gctgcgcgcg tagtcgctga tatgccgttc gacgccgctg
     3061 gccgacagcg cgcgcggcgt gaacgggttg atcggtgcct tcagcttcga cggtgccacc
     3121 gacaacgggt ggtaggcata acggccggcg tgcagcagct gcaggcagat cttcgcgccg
     3181 tgctggtgcg cggcggcggt gagctgccga tgcgggcgca cctcccaggg ccaggacagc
     3241 ttgccgccga acggcttcag ccagccgacc acgttcggtg cgaaaccacc ggtgacgatc
     3301 agcccgacgc cgccttcggc gcgttcggcg aagtaggccg ccagccgagg gaagtcgcgc
     3361 gcgcgatcct ccaggccggt gtgcatcgaa cccatcagta cgcggttgcg cagctgggtg
     3421 aagcccaggt ccagcggggt gaacaggtgg ggataggcgc tttcgttggc tggcgacatg
     3481 gtcgatacgc ttgcgtacgg aagcgcgcag cgtgccgcga aacggcggcc ggggcaaggg
     3541 ttgcttcgct gggtcgtgcc ggccgctggc cgggaacgct cggcacatgc gtgctgtcgc
     3601 tcccgcaatt cgctgcgcga accgcgggcc ccacttatcg gcctccacgc ccccgcgcct
     3661 gcggcgctgc ccccgaactc cgggggcggt agtgccggcc gctggccggg tacgctcggc
     3721 acatgcgtgc tgtcgctccc gcaattcgct gcgcgaaccg cgggccccac ttaccggtct
     3781 ccacgcccct gc
//
LOCUS       DAOKIP010000295         3791 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.299,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000295 DAOKIP010000000
VERSION     DAOKIP010000295.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 3791)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3791)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3791
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.299"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(19..1071)
                     /gene="tolA"
                     /locus_tag="QEL58_003784"
     CDS             complement(19..1071)
                     /gene="tolA"
                     /locus_tag="QEL58_003784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003482566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell envelope integrity protein TolA"
                     /protein_id="HDS1678210.1"
                     /translation="MHADALPPPHQREPGWGLPLALAVLVHLLVALIFIGAWLWSPER
                     NTDAAAGDPSVEASLALSASEASAARQALRQSEKLEDLPPPVAEPIPVPEDTVPPPQP
                     IPEPRPQDAPTPQQQQAQERVAQPDTKDQEAANALAISQEKAKQEQEAKRRQEQIDLT
                     ERKRQEEAEQKLRLAKQQEEDAKKKLADQARQAADKAEAEKQKKIAEIRAKREQAEKE
                     AKLAEQKLRQVAAARNAAGTAAAGASGASQPAAGGGGNSDDLTAKYAAAIQAKVRDTW
                     TRPDSVPLGQKCQVTITQIPGGQVLQAKVGANCPYDEAGKRSIEAAVLNAQPLPYRGF
                     ESVFNRTLNLTFTAQD"
     gene            complement(1061..1489)
                     /gene="tolR"
                     /locus_tag="QEL58_003785"
     CDS             complement(1061..1489)
                     /gene="tolR"
                     /locus_tag="QEL58_003785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein TolR"
                     /protein_id="HDS1678211.1"
                     /translation="MSAAIGRRKRRKLKSEINVVPYIDVMLVLLIIFMVTAPLLTLSF
                     DVDLPQSNAKALESKQDPVIVSVRQDGQLSLKLPDAKEPAAVSAEELEGRLAGIAAQD
                     KGVRVIVAADRAVAYEKVIAAMDVIKRAKVDKVGLATDAR"
     gene            complement(1514..2293)
                     /gene="tolQ"
                     /locus_tag="QEL58_003786"
     CDS             complement(1514..2293)
                     /gene="tolQ"
                     /locus_tag="QEL58_003786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein TolQ"
                     /protein_id="HDS1678212.1"
                     /translation="MIATLLALQATVTEALPADVSNAATQTLAQATTGGGINYLELMA
                     KASLPVKIIVLLLLVGSFVSWVIIFRKARVFKQATREADEFENRFWSGADLGKLYSSA
                     TDRSRNVGGLEAIFEAGFREYTRLRDKRRLDGRAQLEGAQRAMRTTYTREVDQLERNL
                     ELLANIGSTAPYVGLVGTVFGIMVTMHDMISSGAQAGIAAVAPGISEALFATAIGLFV
                     AIPAVWAYNRFTTRVERMSVRFETFAEEFSSILQRQSAGDE"
     gene            complement(2304..2735)
                     /gene="ybgC"
                     /locus_tag="QEL58_003787"
     CDS             complement(2304..2735)
                     /gene="ybgC"
                     /locus_tag="QEL58_003787"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014648160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tol-pal system-associated acyl-CoA thioesterase"
                     /protein_id="HDS1678213.1"
                     /translation="MSVEPRFSWPTRIYWEDTDAGGVVYHARYVAFMERARTEWMRAL
                     GYGQERMRAEHGMVFAVRSMQMDFIRPARLDDTLQVSATLVQLKKASMVFDQQILRDG
                     ELLLSAQVRIAALEAASFRPRGMDESVLAVLQPHLHPESEH"
     gene            complement(2725..3765)
                     /gene="ruvB"
                     /locus_tag="QEL58_003788"
     CDS             complement(2725..3765)
                     /gene="ruvB"
                     /locus_tag="QEL58_003788"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010481595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration DNA helicase
                     RuvB"
                     /protein_id="HDS1678214.1"
                     /translation="MTDDRIIGAGATREDDAADASIRPKRLADYLGQVPVREQMEIYI
                     QAAKGRGDALDHVLIFGPPGLGKTTLSHVIANELGVALRVTSGPVIEKAGDLAALLTN
                     LQPHDVLFIDEIHRLSPVVEEVLYPAMEDFQIDIMIGEGPAARSIKIDLPPFTLIGAT
                     TRAGLLTAPLRDRFGIVQRLEFYSVEELTRIVRRSASILGIDCTADGAGEIARRARGT
                     PRIANRLLRRVRDYAQVKAGGHIDEAVAQAAMQMLKVDPEGFDELDRRLLKTMVNYFD
                     GGPVGIESLAAALSEERGTLEDVVEPYLIQQGFLVRTARGRMATHKAYRHMGLKPKNP
                     PQDLFAEVPDVG"
BASE COUNT          541 a         1255 c         1310 g          685 t
ORIGIN      
        1 ccgccctgcc ccgctcgatc aatcctgcgc agtgaaggtc aggttgagcg tgcggttgaa
       61 caccgactcg aagccccggt acggcagcgg ctgggcattg agcacggcgg cctcgatcga
      121 gcgcttgccg gcctcgtcat aggggcagtt ggcgccaacc ttggcctgca gcacctggcc
      181 acccggaatc tgggtgatcg tcacctggca cttctgcccc aggggcacgc tgtccggacg
      241 cgtccaggtg tcgcgcacct tggcctggat ggccgcagcg tacttggcgg tcaggtcatc
      301 gctgttgcca ccgccaccgg ccgccggctg ggacgcacca ctggcaccgg cagcggccgt
      361 accggcggca ttgcgcgcgg cagccacctg gcgcagtttc tgctcggcca gcttggcttc
      421 cttctcggcc tgctcacgct tcgcacggat ctcggcgatc ttcttctgct tctcggcctc
      481 ggccttgtcc gcagcctgac gcgcctggtc ggccagcttc ttcttggcgt cttcttcctg
      541 ctgcttggcc aggcgcagct tctgctccgc ttcttcctgg cgcttgcgtt cggtcaggtc
      601 gatctgctcc tggcggcgct tggcttcctg ctcctgcttg gccttctcct gcgagatggc
      661 cagcgcgttg gctgcttcct ggtccttggt atccggctgc gcgacacgct cctgcgcctg
      721 ttgctgctgc ggtgtcggcg cgtcctgcgg gcgcggctcg ggaatcggct gcgggggcgg
      781 cacggtgtct tccggcaccg ggatcggttc ggcgaccggc ggcggcaggt cttccagctt
      841 ctccgactgg cgcagcgcct ggcgcgcggc ggacgcttcg gacgcggaca gcgccaggct
      901 ggcctcgacc gacgggtcgc cggcagcggc atcggtgttg cgctcgggcg accacagcca
      961 ggcgccgatg aagatcagcg cgaccagcag atgcaccagc accgccagcg ccaggggcag
     1021 gccccagccg ggttcgcgct gatgcggagg tggcagggcg tcagcgtgca tcggtggcca
     1081 ggcctacctt gtctaccttg gcgcgcttga tcacatccat cgcggcgatg accttttcat
     1141 aggccacggc acggtcagcg gcgacgatca cgcgcacgcc cttgtcctgg gcggcgatgc
     1201 cggccaggcg gccttccagt tcctcggccg acaccgcggc cggttccttg gcgtcgggca
     1261 gcttcaggct gagctggccg tcctggcgca ccgagacgat caccgggtcc tgcttgcttt
     1321 ccagcgcctt ggcgttggac tgcggcaggt cgacgtcgaa gctcagggtg agcagcggcg
     1381 cggtgaccat gaagatgatc agcagcacca gcatgacgtc gatgtaggga acgacgttga
     1441 tttccgattt cagcttgcgg cgcttgcggc gaccgatggc agcggacatg gcttggactc
     1501 ccgggtcagg cgcttactcg tcgccagcgc tctggcgctg caggatggag ctgaactctt
     1561 cggcgaaggt ctcgaaccgc accgacatgc gctccacgcg ggtggtgaag cggttgtagg
     1621 cccacaccgc cggaatcgcc acgaacaggc cgatggcggt ggcaaagagc gcttcggaga
     1681 tgcccggcgc aacggcggcg atgccggcct gcgcgccact gctgatcatg tcgtgcatgg
     1741 tcaccatgat gccgaacacg gtaccgacca ggcccacgta cggggcggtc gagccgatgt
     1801 tggccagcag ttccaggttg cgctcgagct ggtccacttc gcgggtgtag gtggtgcgca
     1861 tggcacgctg cgcgccttcc agctgcgcac ggccgtccag ccggcgtttg tcgcgcaggc
     1921 gggtgtactc gcggaaaccg gcttcgaaga tcgcctccag gccgccgacg ttgcggctgc
     1981 ggtcggtggc cgagctgtac agcttgccga ggtcggcacc ggaccagaag cggttctcga
     2041 actcgtcggc ttcgcgggtg gcctgcttga acacgcgggc cttgcggaaa atgatcaccc
     2101 agctgacgaa cgagcctacc agcagcagca gcacgatgat cttcaccggc aggctggcct
     2161 tggccatcag ttcgaggtag ttgatgccgc cgccggtggt ggcctgggca agggtctgtg
     2221 tcgcggcgtt gctgacgtcg gccggcagtg cctcggtgac cgtggcctgc agggccagga
     2281 gcgttgcgat catccgttgt tcctcagtgt tcggattcgg ggtggaggtg gggttgcagc
     2341 accgcaagga cggattcgtc catgccgcgc gggcggaaac tggccgcttc cagtgcggcg
     2401 atgcggacct gggccgacag cagcagctcg ccatcgcgca ggatctgctg gtcgaagacc
     2461 atgctggcct tcttcagctg gaccagcgtg gcgctcacct gcagggtgtc atccagccgt
     2521 gccggcctga tgaaatccat ctgcatcgag cgcaccgcga agaccatgcc gtgctcggca
     2581 cgcatgcgct cctggccgta gcccagcgca cgcatccatt cggtccgggc ccgttccatg
     2641 aaggccacgt agcgggcgtg gtagaccacc ccgccagcgt ccgtatcttc ccagtaaatg
     2701 cgtgtcggcc aactgaatcg cggctcaacc gacatcggga acctccgcga acaggtcctg
     2761 cggcgggttc ttcggcttca ggcccatgtg ccggtaggcc ttgtgggtgg ccatgcggcc
     2821 gcgcgcggtg cgcaccagga agccctgctg gatcaggtag ggctcgacca cgtcttccag
     2881 cgtgccacgt tcctcggaca gcgccgcggc cagcgattcg atgcccaccg ggccgccatc
     2941 gaagtaattg accatggtct tcagcaggcg ccgatcgagc tcgtcgaagc cctccgggtc
     3001 gaccttcagc atctgcatcg cggcctgcgc gacagcctcg tcgatgtggc cgccggcctt
     3061 gacctgggca tagtcgcgca cgcggcgcag caggcggttg gcgatacgcg gcgtgccacg
     3121 cgcgcggcgc gcgatctcgc cagcgccatc ggcggtgcag tcgatgccga ggatgctggc
     3181 cgagcggcgc acgatccggg tcagctcttc gacgctgtag aactccaggc gctggacgat
     3241 gccgaagcgg tcgcgcagcg gcgcggtcag caggccggcg cgggtggtgg cgccaatcag
     3301 ggtgaacggc ggcaggtcga tcttgatcga acgggccgca gggccctcgc cgatcatgat
     3361 gtcgatctgg aaatcttcca tggccgggta cagcacttct tccaccaccg gcgacaggcg
     3421 atggatctcg tcgatgaaca gcacatcgtg cggctgcagg ttggtcagca gcgcggccag
     3481 gtcaccggcc ttctcgatca ccgggccgga ggtcacccgc agggccacgc ccagctcgtt
     3541 ggcgatgacg tggctgaggg tggtcttgcc caggccgggc ggcccgaaga tcagcacgtg
     3601 gtccagcgcg tcgccacgac ccttggccgc ctggatgtag atttccatct gctcgcgcac
     3661 cggcacctgg ccgaggtagt cggctagccg cttggggcgg atgctggcgt cggcggcgtc
     3721 atcctcgcgg gtggcgccgg cgccgatgat gcggtcgtcg gtcatgtgct gattatgcgg
     3781 caaaagtacg g
//
LOCUS       DAOKIP010000296         3753 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.300,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000296 DAOKIP010000000
VERSION     DAOKIP010000296.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 3753)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3753)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3753
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.300"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(2..808)
                     /locus_tag="QEL58_003789"
     CDS             complement(2..808)
                     /locus_tag="QEL58_003789"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004136102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2884 family protein"
                     /protein_id="HDS1678215.1"
                     /translation="MRLPLPALALLACLASAPVLAGDAPKLRSDQCGMRTDYDVLVDS
                     GGIWLRHGPQAPHEVVFHDGVLSLDDTIVPVSEADAARLRQMEAGARQLMPAATALAH
                     EVSGLSFDVLDGVYESLTGTANSRKVRRLRRQADDWIGGTLGKGYWEQAVFGPGFEAK
                     VQDMAESLSASIARSVLWQVFTGRSDAMEERADRLDAQMEQQLEGRAERIEARAQALC
                     PLVAAVAEAHDALEVRYQGQPLRLIQRSEGVQVAASVREQPQDDAVVPSR"
     gene            1361..>3753
                     /locus_tag="QEL58_003790"
     CDS             1361..>3753
                     /locus_tag="QEL58_003790"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019337780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleoside-diphosphate reductase subunit
                     alpha"
                     /protein_id="HDS1678216.1"
                     /translation="MSTESSATIEKESEFLLTSPPTANAMSVTKRNGTTELVDLNKIV
                     RAVQRSSEGLHAVDPMRVATRTISGLYNGATTRELDELSIRTAALLIGEEPEYGRLAA
                     RLLANYIAKEVSGQEIYAFSQSVSRGHEVGLINDRLLNFVQTNARKLNDAIDGALDLN
                     FDYFGLRTLYDRYLLRHPHTRKVIETPQQFFLRIASALSEDVSETLALYKRMGNLDYL
                     PSSPTLFNAGTTHEQLSSCFLLDSPQDSLESIYSKYGDIAQLSKFSGGIGVSYTRVRS
                     RGSLIKSTNGHSNGIVPWLKTMDSSVAAVNQGGKRKGAACVYLETWHADVEDFLELRD
                     NTGDEARRAHNLNLANWVPDLFMKRVEADQEWSLFDPRVVPEFTDLFGEAFEQAYLQA
                     EAQGKANRTISARKLYARMMRTLAETGNGWMTFKDKCNRASNQTLRPGNVIHLSNLCT
                     EILEVTSNDETAVCNLGSINLGNHFDEHNEFDFEKLAETVRLAVRQLDRVIDLNFYPI
                     ETARRANLRWRPVGLGCMGLQDVFFRKRLPFDSAEARALSKKIAEAIYFHALETSCEL
                     AQERGKHPSFNDTRAASGELQFDAWNVVPEDTARWDALRERIKEHGLRNSLMIAIAPT
                     ATIASIAGCYECVEPQVSNLFKRETLSGDFLQVNRYLVNELKKLGLWTADMRDAIKLA
                     EGSIAGVAQIPETLREVYRTAWELPMRSLIDMAAERGAFIDQSASLNLFMESPNIGAM
                     SSMYMYAWKQGIKTTYYLRSRPATKIAKTTVSAAAPAKVFSPDEAIACSLENPEACEA
                     "
BASE COUNT          663 a         1349 c         1133 g          608 t
ORIGIN      
        1 gctatctgct tggcaccacc gcatcatcct gcggctgctc gcgcacgctg gccgccacct
       61 gcacgccctc actgcgctgg atcagccgca gcggctgccc ttggtagcgg acctccagcg
      121 cgtcgtgggc ctcggccacg gcggccacca gcgggcacag cgcctgcgcg cgggcctcga
      181 tgcgctcggc gcggccttcc agctgctgtt ccatctgcgc gtccaggcgg tcggcgcgtt
      241 cctccatcgc atcgctgcga ccggtgaaca cctgccacag cacgctgcgg gcgatggacg
      301 cggacagcga ctcggccatg tcctgcacct tggcctcgaa gcccggcccg aacactgcct
      361 gttcccagta acccttgccc agcgtgccgc cgatccagtc atcggcctgc cggcgcaggc
      421 gccggacctt gcggctgttg gcggtgccgg tgaggctctc atagaccccg tcgagcacgt
      481 cgaagctcag cccactcact tcatgggcca gcgcggtggc cgccggcatc agctgccgcg
      541 ccccggcctc catctgccgc aggcgggcgg cgtcggcctc gctgaccggc acgatcgtgt
      601 cgtccaggct cagcacgcca tcgtggaaca ccacctcgtg cggcgcctgc gggccatgcc
      661 gcagccagat gccaccgctg tccaccagca cgtcgtagtc ggtgcgcatg ccgcactggt
      721 ccgagcgcag cttcggggcg tcgccggcca gcaccggggc gctggccagg caggccagca
      781 gggccagggc gggcaggggc aggcgcatgg tggaatcctt tccggtcagt gcagggcccc
      841 agcatcccgc gcccgcacgg cactgtcacc ggccggaagt cactgcccga tggtcatcca
      901 accggccata ccggctttcc caccggctgc ccaccagcta tccacaggtt tgtccctagc
      961 cagtttcatc actgtcatgt gaagctgtca ttgttccgtt ttcgcggtgc gttgtaccac
     1021 cgcgatgacg cctttcgggc ttgactgcgc agcccgttcc ggcaggtctg aagcgtctga
     1081 tccgggcgct gatggcacga tccttgcggc gcaagggatt gccgaatttc actacatttg
     1141 gcgttgacgg cccccattac ccccactatc ttgtggccgt cggtcgcagc aaccccaatt
     1201 ccagggggtg gcagcagcac ccatccgcga tcgtcaacgg cagtggcagg cgcagggtct
     1261 catcccctgc gacgccgtcc tgccatcctg ggctgtcatg tcccgggctg cgtcacccga
     1321 tgcatcgagc acccccaatc acgccaagag gacacacgcc gtgagcaccg aatccagcgc
     1381 caccatcgag aaggaaagcg aattcctgtt gacgtcgccg ccgacggcca acgcgatgag
     1441 tgtgaccaag cgcaacggga ccaccgaact ggtggatctg aacaagatcg tgcgcgcggt
     1501 gcagcgttcc tccgaaggcc tgcacgccgt cgatccgatg cgcgtggcca cccgcaccat
     1561 ttccggcctg tacaacggcg ccaccacccg cgagctggac gaactgtcca tccgcaccgc
     1621 cgccctgctg atcggtgaag agcccgagta cggccgcctg gccgcgcgcc tgctggccaa
     1681 ctacatcgcc aaggaagtct cgggccagga aatctacgcc ttctcgcagt cggtcagccg
     1741 tggccatgaa gtcggcctga tcaacgaccg cctgctgaac ttcgtgcaga ccaacgcacg
     1801 caagctcaac gacgccatcg acggcgcgct ggacctgaac ttcgattact tcggcctgcg
     1861 taccctgtac gaccgctacc tgctgcgcca cccgcacacc cgcaaggtga tcgagacccc
     1921 gcagcagttc ttcctgcgca tcgccagtgc gctgagcgag gacgtgtccg agaccctggc
     1981 gctgtacaag cgcatgggca acctggacta cctgccgtcc agcccgaccc tgttcaacgc
     2041 cggcaccacc cacgagcagc tgtcctcgtg cttcctgctg gactcgccgc aggactcgct
     2101 ggagtcgatc tattccaagt acggcgacat cgcccagctg tcgaagttct ccggcggcat
     2161 cggcgtcagc tacacccgcg tgcgttcgcg tggttcgctg atcaagtcga ccaacggcca
     2221 ctccaacggc atcgtgccgt ggctgaagac catggattcg tcggttgccg cggtgaacca
     2281 gggcggcaag cgcaagggcg cggcctgcgt gtacctggaa acctggcacg ccgacgtcga
     2341 ggacttcctc gagctgcgtg acaacaccgg tgacgaagcc cgccgtgcgc acaacctgaa
     2401 cctggccaac tgggtgccgg acctgttcat gaagcgcgtc gaggccgacc aggaatggtc
     2461 gctgttcgat ccgcgcgtgg tgccggagtt caccgacctg ttcggcgaag ccttcgagca
     2521 ggcctacctg caggccgaag cgcagggcaa ggccaaccgc accatctccg cgcgcaagct
     2581 gtacgcccgc atgatgcgta cgctggccga gaccggcaac ggctggatga ccttcaagga
     2641 caagtgcaac cgcgccagca accagaccct gcgtccgggc aacgtgatcc acctgtccaa
     2701 cctgtgcacc gaaatcctgg aagtcacttc caacgatgag accgccgtgt gcaacctggg
     2761 ttcgatcaac ctgggcaacc acttcgacga gcacaacgag ttcgacttcg agaagctggc
     2821 cgagaccgtg cgcctggccg tgcgccagct cgaccgcgtc atcgacctga acttctaccc
     2881 gatcgaaacc gcccgccgcg ccaacctgcg ctggcgtccg gtcggcctgg gctgcatggg
     2941 cctgcaggac gtgttcttcc gcaagcgcct gccgttcgac agcgccgaag cccgcgccct
     3001 ctcgaagaag atcgccgaag cgatctactt ccacgcgctg gaaacctcct gcgagctggc
     3061 ccaggaacgt ggcaagcacc cgtcgttcaa cgacacccgt gccgccagcg gcgaactgca
     3121 gttcgacgcc tggaacgtgg tgccggaaga caccgcacgc tgggatgccc tgcgtgagcg
     3181 catcaaggaa cacggcctgc gcaactcgct gatgatcgcg atcgcgccga ccgcgaccat
     3241 tgcctcgatc gccggctgct acgagtgcgt cgagccgcag gtgtccaacc tgttcaagcg
     3301 cgagaccctg tccggtgact tcctgcaggt caaccgctac ctggtgaacg agctgaagaa
     3361 gctgggcctg tggaccgccg acatgcgcga tgcgatcaag ctggccgaag gctccatcgc
     3421 cggcgtggcg cagattccgg aaacgctgcg cgaggtctac cgcactgcgt gggaactgcc
     3481 gatgcgttcg ctgatcgaca tggccgccga gcgtggcgcc ttcatcgacc agtcggcctc
     3541 gctcaacctg ttcatggaaa gcccgaacat cggcgcgatg tcctccatgt acatgtacgc
     3601 ctggaagcag ggcatcaaga ccacctacta cctgcgttcg cgcccggcca ccaagatcgc
     3661 caagaccacg gtgagcgctg cggccccggc caaggtgttc agcccggacg aagccatcgc
     3721 ctgctcgctg gaaaacccgg aagcctgcga ggc
//
LOCUS       DAOKIP010000297         3648 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.301,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000297 DAOKIP010000000
VERSION     DAOKIP010000297.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 3648)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3648)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3648
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.301"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            41..667
                     /locus_tag="QEL58_003791"
     CDS             41..667
                     /locus_tag="QEL58_003791"
                     /EC_number="3.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014647267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase"
                     /protein_id="HDS1678217.1"
                     /translation="MLDGLPSHWKILPRRFYQRPPTEVAPELLNKLLVRDDGRAARIV
                     EVEAYAGSVDPAAHSYRGPTPRTASMFGEAGHLYVYFTYGMHWGSNVVCGEIGEGVAV
                     LLRAAEPLAGLEYMRELRPAARRDHDLASGPGKLSQAFGLDRRFDGADLVTGNQGIVI
                     ASDGTAPPLDPVVGPRIGITRAVEFPWRWHVRDHRHVSVRPPRSPRKR"
     gene            783..2492
                     /locus_tag="QEL58_003792"
     CDS             783..2492
                     /locus_tag="QEL58_003792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HDS1678218.1"
                     /translation="MDEAERLLELDRLHLLDTPPEPVFDAIVAAARAATGMTMALISV
                     VADERQWFKANIGLDGVSETAREISFCTHTIQQDALFEIPDARQDPRFASNPLVIGGP
                     RIRHYAGISLGSAQGARIGTLCLLDPMPGVLSPSQRELMVHLARVTTQVLEQRSTLMA
                     QVGQAKALHRELKRSEDFLERTNRAARVGGWELDLASNEVRWTRETKLIHGVRSTFEP
                     TLETALSFYREDSRSIIRTAVQRCIDEGTSWEVQLPMTTADGRDIWTRVVGGRQQVDG
                     RPRLVGAIQDITEERAALDALEASETRYRRLFHYSLGLICTHTLEGVLTSVNPAAVQS
                     LGFDESYMIGRSLCDLMPPEKHAAFKAYLARIAVNHTDAGVIELIAADGTRHFWAYHN
                     VLDSEANPPYVLGHAQDVTALRMQEQQLREMSFKDPLTQSYNRRFLPRLDELADQPWA
                     CLMFDLDHFKQINDTQGHARGDTVLVEFAAFLRSPLGAAENVVRMGGDEFMVVLITPD
                     AGRLAVLEQWYLQHAAQSPTPFSLGATHHTPGESVSDTLQRADSRLYRERARVRRHPR
                     PAS"
     gene            2898..3299
                     /locus_tag="QEL58_003793"
     CDS             2898..3299
                     /locus_tag="QEL58_003793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1678219.1"
                     /translation="MSADRYPYLFATLGDVASQLPDTLAEPLETTLAANPAANGITLL
                     DCLQRIRDVEAADGQPLQRKGRAPGQCVALARINRANAGLTVLLELLHASERVRVDGE
                     EAQQVGNDVREGLLLACRGLSEYVDTQVYAA"
     gene            complement(3348..>3648)
                     /locus_tag="QEL58_003794"
     CDS             complement(3348..>3648)
                     /locus_tag="QEL58_003794"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010485510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HDS1678220.1"
                     /translation="ERVREIGVRLAVGARQGDILRQFLIEAVLICLFGGVLGVLFAFA
                     VGALSSLLSLGVPFLFTAGPVLAALACSSAIGLGFGYFPARSAAQLDPIQALAAE"
BASE COUNT          635 a         1315 c         1152 g          546 t
ORIGIN      
        1 cgtcacactg caggcttctc ccgcagagcc cgcccctgcc gtgctggatg gattgccctc
       61 gcactggaag attctccccc gccgcttcta ccagcgcccg cccaccgagg ttgcgccgga
      121 gctgctcaac aagctgctgg tgcgcgacga tggacgcgcg gcccgcatcg tcgaggtcga
      181 agcctacgcc ggcagcgtgg acccggccgc gcattcctac cgtgggccga ccccgcgcac
      241 cgccagcatg ttcggcgaag ccgggcacct gtacgtctac ttcacctatg gcatgcactg
      301 gggcagcaat gtggtgtgtg gcgagatcgg cgaaggggtg gccgtgctgc tacgtgccgc
      361 cgaaccgctg gccgggcttg agtacatgcg cgaattgcgc ccggctgcca ggcgcgacca
      421 cgatctggcc agcggcccgg gcaaactctc ccaggcgttc gggctggacc gccgcttcga
      481 cggtgccgat ctggtgaccg gcaaccaggg gatcgtcatc gccagcgatg gcaccgcgcc
      541 cccgctcgac ccggtggtcg gcccgcgtat cggcatcacg cgcgccgtgg agtttccgtg
      601 gcgctggcac gttcgcgacc accgtcacgt ttcagtgcgc ccaccccgct cgccccgcaa
      661 gcgatgacac cgctgcctca cgttggcatc acccggtcgt ggcgatacat aacgcggtac
      721 gcactagcgt agcgcctgac agccgccgaa gccgccctcg ccacccagcc ctgaaaagcg
      781 ccatggacga agccgaacga ctgcttgaac ttgaccggct gcacctgctg gacaccccgc
      841 cggaacccgt gtttgacgcc atcgtggccg ccgctcgtgc cgccaccggc atgaccatgg
      901 cgctgatctc ggtagtggcc gacgagcgcc agtggttcaa ggccaacatc gggctggacg
      961 gggtcagcga gaccgcacgc gaaatctcgt tctgcacgca caccatccag caggatgcgc
     1021 tgttcgagat tccagacgca cgccaggacc cgcgcttcgc cagcaatcca ctggtcatcg
     1081 gcggcccccg catccgccac tacgccggca tctcgctggg ctcggcgcag ggtgcgcgca
     1141 tcggcacgct gtgcctgctc gacccgatgc ccggcgtgct gtcgccgtcg cagcgcgaac
     1201 tgatggtgca cctggcccgg gtcaccaccc aggtgctgga acagcgcagc acgctgatgg
     1261 cgcaggtcgg ccaggccaag gccctgcacc gcgaactgaa gcgcagcgag gatttcctgg
     1321 aacgcaccaa ccgcgccgcg cgggtgggcg gctgggaact ggacctggcc agcaacgagg
     1381 tgcgctggac ccgcgagacc aagctgatcc acggcgtgcg cagcaccttt gaacccaccc
     1441 tggaaaccgc gttgtcgttc tatcgcgaag acagccgcag catcatccgc accgccgtgc
     1501 agcgctgcat cgacgaaggt acctcctggg aagtgcagct acccatgacc accgccgacg
     1561 gccgcgacat ctggacgcgc gtcgtcggcg gccggcagca ggtcgacggc cgcccgcgcc
     1621 tggtcggcgc catccaggac atcaccgaag agcgcgccgc actggatgcg ctggaagcca
     1681 gcgaaacccg ctaccggcgc ctgttccact acagcctggg gctgatctgc acgcacacac
     1741 tggaaggcgt gctgacctcg gtgaatccgg ccgcggtgca atcgctgggc ttcgacgaga
     1801 gctacatgat cgggcgcagc ctgtgcgacc tgatgccgcc ggagaagcac gccgcgttca
     1861 aggcgtacct cgcccgcatt gcggtcaacc acaccgatgc cggcgtgatc gagctgatcg
     1921 ccgccgatgg cacccgccac ttctgggcct accataacgt gctcgacagc gaggccaacc
     1981 cgccctacgt gctgggccac gcacaggacg ttaccgcgct gcgcatgcag gaacagcagc
     2041 tgcgcgagat gtccttcaag gacccgctga cccagagcta caaccgccgc ttcctgccac
     2101 ggctggacga gctggccgac cagccctggg cctgcctgat gttcgacctc gatcacttca
     2161 agcagatcaa cgacacccag ggccatgcgc gcggcgatac cgtgctggtg gagttcgccg
     2221 ccttcctgcg ctcgccgctg ggtgcggcgg aaaacgtggt gcggatgggc ggcgacgagt
     2281 tcatggtggt gttgatcacg cctgatgcgg ggcggctggc ggtgctggaa cagtggtatc
     2341 tgcagcatgc cgcgcagtcg ccgacgccgt tctcactcgg tgcgacgcac cacacgcccg
     2401 gcgaatcggt gagcgatacc ctgcagcgtg ccgacagccg gttgtatcgc gaacgcgcac
     2461 gcgtgcgcag gcatcctcga ccggcttcct gacgcgccac acacgctacg cggcatcgca
     2521 cgcaatgtcg tgattggcac gcctcgatca tccgctgcgc gggtacatcc acattccaat
     2581 aatttcgaac tttccaacta ttctcattgg cagccaaggc gctgcatgca aatcatatcc
     2641 agccaccgac aacgggtggc acgggcttcc aatcccgttt gactaatgtt gtttacgctt
     2701 gcctgtcggc gtcgtccaat ccctctggaa ggcgccggca ggcactctgt ccgcgcatct
     2761 atggcgggcg gtgcgtgggg gcctcgtgcc cgccggagct ttggcaacgt tagtcaccgg
     2821 tattggaacc atgcaccgtc cgccaccctt gctgtcaagc agggtggctc cttcgcgcaa
     2881 cgcataagga aaccgccatg agcgccgacc gctacccgta cctgttcgcc accctcggtg
     2941 atgtcgccag ccagttgccc gacaccctcg ccgagccgct ggaaaccacc ctcgccgcca
     3001 atcccgccgc caacggcatc accctgctgg actgcctgca acgcatccgc gacgtggaag
     3061 cggccgacgg ccagcccttg cagcgcaagg ggcgcgcacc ggggcaatgc gtggcgctgg
     3121 cgcgcatcaa ccgcgccaac gccgggctca ccgtgctgct ggagctgctg catgccagcg
     3181 agcgcgtgcg ggtggatggc gaagaggcgc agcaggtggg caacgacgtg cgcgagggcc
     3241 tgctgctggc gtgcaggggc ctgtcggaat acgtggacac gcaggtctac gcggcctgag
     3301 cgatggcgcc gggcgctccc cggcgctaac cacaggcgcg catcgcgtca ttccgcggcc
     3361 agcgcctgga tcgggtccaa ctgtgccgca ctgcgtgccg gaaagtagcc gaagccgagc
     3421 ccgatcgccg acgagcacgc cagtgcggcc agtaccggcc ccgcagtgaa caggaacggc
     3481 acgcccagcg acagcaggct ggacaacgcc cccaccgcga acgcgaacaa cacgcccagc
     3541 acaccgccga acaggcagat cagcaccgcc tcgatcagga actggcgcag gatgtcgccc
     3601 tggcgcgcgc ccaccgccag ccgcacgcca atctcgcgca cgcgttcc
//
LOCUS       DAOKIP010000298         3580 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.302,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000298 DAOKIP010000000
VERSION     DAOKIP010000298.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 3580)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3580)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3580
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.302"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..2055)
                     /locus_tag="QEL58_003795"
     CDS             complement(<1..2055)
                     /locus_tag="QEL58_003795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014646394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HDS1678221.1"
                     /translation="MTGSYSQSLVAISLLVAILASYTALDMAGRLATAEGRVARWWLA
                     GGAAAMGLGIWSMHFIGMLAFDLPIPVGYDLGITLYSLAVSIGASAYALWLVSRPSLP
                     WRRLLAGAVLMGLGIATMHYLGMAAMRMQPGIDYHPGWFAASIAVAIGAAGAALWIAF
                     RLRAEQHNTLRLRALASLVMGLAIVGMHYTGMAAARFPEGSICGAVGSGAIDTRWLAV
                     LVIVTTVATLGIALVASLFDRQMRVRTGLLADSLARANNKLIQAALHDPLTQLPNRML
                     LQDRIEQAIEKARRRGHTVAVMFCDLDGFKAVNDAYGHQLGDRLLVAVAQRIGGLLRP
                     QDTFARLGGDEFVIVLAIDIPDDAVVVAERIIAAAGEPFTLDAAELQVSASLGIALYP
                     DDAGNERELMAHADAAMYHTKETGRNGYTFFTPSMQLSANRQLRLLQDLRKAIARDEL
                     ILHYQPKFPAAGAPATGAEALLRWQHPELGLLAPDVFIPIAERSGLILPIGDWVLDRA
                     CAQLRAWHEAGHAEWSMAVNLSPLQFASPALLDSVREVLQRHRIEPARLTLEITETTA
                     MKDVDASLAILNDLTAMGVHIAIDDFGTGYSSLLYLKRMPATELKIDRAFVHDLERND
                     EDAAIVSSIIALGRTLQLQVVAEGVETQAQREYLSELGCDQLQGYHLGRPMEAEEFLR
                     KVA"
     gene            2206..>3580
                     /gene="radA"
                     /locus_tag="QEL58_003796"
     CDS             2206..>3580
                     /gene="radA"
                     /locus_tag="QEL58_003796"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003484290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadA"
                     /protein_id="HDS1678222.1"
                     /translation="MAKARTAYVCNECGAEYSKWQGQCTECNAWNALSEIVLESAAAA
                     KAPASRRAGWAGKIDPPKITALKDVEQTEHRRVSTGIGEFDRVLGGGLVEGAVVLVGG
                     DPGIGKSTLLLQAVAKMAAELPVLYVTGEESLAQVAGRAHRLELPLDGVNALAETGVE
                     SILQHASRAGPRLIVADSVQTLWTESLTAAPGSVSQVRESAARLVRFAKETGTAVFLV
                     GHVTKEGGIAGPRVLEHMVDAVLYFEGESGSRFRLLRAFKNRFGAVNELGVFAMGDKG
                     LKEVSNPSAIFLSGGSTHQPGSCVMVTREGTRPLLVEVQALVDASPLSNPRRVAVGLE
                     QNRLAMLLAVLHRHGGVLVGDQDVFVNVVGGIRVQETAADLPVLLAVLSSLQDRPLAE
                     KTIAFGEVGLSGEIRPVPNGEDRLREAATHGFKRAIVPKANAPKGGSVKGMEVIAVER
                     LSEAIDAA"
BASE COUNT          551 a         1177 c         1302 g          550 t
ORIGIN      
        1 cgccaccttg cgcaggaatt cctcggcctc catcggccgg cccaggtggt acccctgcag
       61 ctggtcgcag cccagttcgc tcaggtactc gcgctgcgcc tgcgtctcca cgccttcggc
      121 caccacctgc agctgcaggg tgcggcccag cgcgatgatc gacgagacaa tggcggcgtc
      181 ctcgtcattg cgttccaggt cgtgcacgaa ggcgcggtcg atcttcagtt cggtggccgg
      241 catgcgcttg aggtacagca ggctggaata gccggtgccg aaatcgtcga tggcaatgtg
      301 cacgcccatc gcggtgaggt cgttgaggat cgccaggctg gcatcgacgt ccttcatcgc
      361 cgtggtctcg gtgatctcca gggtcagccg tgccggttcg atccggtgcc gctgcagcac
      421 ctcgcgcacg ctgtccagca gcgctggcga ggcgaactgc aacggcgaca ggttcaccgc
      481 catcgaccat tccgcatggc cggcctcgtg ccacgcacgc agctgcgcac acgcacggtc
      541 cagcacccag tcgccaatcg gcaggatcag gccgctgcgc tcggcgatgg ggatgaacac
      601 gtccggggcc agcaggccca gctccgggtg ttgccagcgc agcagcgcct cggcgccggt
      661 ggccggtgcg cccgcggccg ggaacttggg ctggtaatgc aggatcagtt cgtcgcgggc
      721 gatggccttg cgcaggtcct gcagcaggcg cagctggcgg ttggcgctca gctgcatcga
      781 cggggtgaag aaggtgtagc cgttccggcc ggtttccttg gtgtggtaca tcgccgcatc
      841 ggcatgcgcc atcagctcgc gctcgttgcc ggcatcgtcc gggtacagcg cgatgccgag
      901 gctggcgctg acctgcagtt cggccgcatc cagcgtgaac ggctcgccgg ccgcggcgat
      961 gatgcgctcg gccaccacca ccgcatcgtc gggaatgtcg atggccagca cgatcacgaa
     1021 ctcgtcgccg ccgaggcggg caaaggtatc ctgcggccgc agcaggccgc cgatgcgctg
     1081 cgccaccgcc accagcaggc ggtcgccgag ctggtggccg taggcatcgt tgaccgcctt
     1141 gaagccgtcc aggtcgcaga acatcaccgc caccgtgtgg ccgcggcggc gcgccttctc
     1201 gatggcctgt tcgatgcggt cctgcagtag catgcggttg ggcagctggg tgagcgggtc
     1261 gtgcagcgcg gcctggatca gcttgttgtt ggcgcgcgcc agcgaatcgg ccagcagccc
     1321 ggtgcgtacg cgcatctgcc gatcgaacag cgaggcgacc agcgcgatgc ccagcgtggc
     1381 cacggtggtg acgatcacca gcaccgccag ccagcgggtg tcgatggcgc cgctgccgac
     1441 cgcgccgcag atgctgcctt cggggaagcg cgccgcggcc atgccggtgt aatgcatgcc
     1501 gacgatggcc aggcccatca ccagcgaggc cagtgcgcgc aggcgcaggg tgttgtgctg
     1561 ctcggcacgc aggcggaagg cgatccacag cgcggcgccg gcggcaccga tggccaccgc
     1621 gatcgatgcg gcgaaccagc ccgggtggta atcgatgccc ggctgcatgc gcatcgccgc
     1681 catgccgagg tagtgcatgg tggcgatgcc cagccccatc agtaccgcgc cagccagcag
     1741 tcgtcgccac ggcaggctgg gccgcgacac cagccacagc gcataggccg aggcaccaat
     1801 ggagaccgcc agcgagtaca gggtgatgcc gaggtcgtag ccgactggaa tcggcaggtc
     1861 gaaggccagc atgccgatga agtgcatcga ccagatgccc aggcccatcg ccgccgcgcc
     1921 ccctgccagc caccagcggg ccacgcggcc ttcggcggtg gccaggcggc cggccatgtc
     1981 cagcgcggtg tacgaagcaa gaatggccac cagcagcgag atggcaacca ggctctgact
     2041 gtaactgcca gtcatgttga atccagtggg aggagggagg ggcgcccgca aggcgcacgc
     2101 ccgcgacccc tatcggcgcg ggtgggcggg acttgagcgg tcgcagcacc tgcgacccgg
     2161 ctcggctatc ctgccacgcc tgttcccgtt gctggaaatc atccgatggc caaagcccgc
     2221 accgcctacg tctgcaatga atgcggcgcc gagtacagca agtggcaggg ccagtgcacc
     2281 gagtgcaatg cctggaacgc gctgtcggag atcgtgctgg agagcgcggc ggcggccaag
     2341 gcgccggcct cgcgccgggc cggctgggcc ggcaagatcg atccgccgaa gatcaccgcg
     2401 ttgaaggatg ttgagcagac cgagcaccgc cgggtctcca ccggcatcgg cgagttcgac
     2461 cgcgtgctgg gcggcggcct ggtcgaaggt gcggtggtgc tggtgggtgg cgatccgggc
     2521 atcggcaagt cgaccctgct gttgcaggcg gtggcgaaga tggcggccga gctgccggtg
     2581 ctgtatgtca ccggcgagga gtcgctggcc caggtggccg gccgtgcgca tcggctggag
     2641 ctgccgctgg acggtgtgaa tgcgctggcc gagaccgggg tcgaatcgat cctgcagcat
     2701 gcgtcccgag ccggcccgcg gctgatcgtg gccgattcgg tgcagacgct gtggaccgaa
     2761 agcctgaccg ccgcgcccgg ctcggtcagc caggtgcgcg agagcgcggc gcggctggtg
     2821 cgcttcgcca aggagaccgg caccgccgtg ttcctggtcg gccacgtgac caaggagggc
     2881 ggcatcgccg gcccgcgcgt gctggagcac atggtcgatg cggtgctgta cttcgagggt
     2941 gagagcggca gccgcttccg cctgttgcgc gcgttcaaga accgcttcgg tgcggtcaac
     3001 gagctgggcg tgttcgcgat gggcgacaag ggcctgaagg aggtctccaa tccgtcggcg
     3061 atcttcctgt ccgggggcag tacccaccag ccgggcagct gcgtgatggt cacccgcgag
     3121 ggcacccggc cgttgctggt ggaggtgcag gcattggtgg atgcgtcgcc gctgtcgaat
     3181 ccgcgccgtg tcgccgttgg cctggagcag aaccggctgg ccatgctgct ggcggtgctg
     3241 caccgccacg gcggcgtgct ggttggcgac caggacgtgt tcgtcaatgt ggtcggtggc
     3301 atccgcgtgc aggaaaccgc cgccgacctg ccggtgctgc tggcggtgct gtcctcgctg
     3361 caggaccggc cgctggcgga gaagacgatt gcctttggcg aggtcggcct gtccggcgag
     3421 atccgcccgg tgcccaatgg cgaagaccgc ctgcgcgagg ccgccaccca tgggttcaag
     3481 cgcgccatcg tgcccaaggc caatgcgccc aagggcggct ctgtgaaggg catggaagtg
     3541 atcgcggtgg agcggttgtc cgaggccatc gacgcggcgt
//
LOCUS       DAOKIP010000299         3562 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.303,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000299 DAOKIP010000000
VERSION     DAOKIP010000299.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 3562)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3562)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3562
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.303"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(12..1172)
                     /locus_tag="QEL58_003797"
     CDS             complement(12..1172)
                     /locus_tag="QEL58_003797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDS1678223.1"
                     /translation="MNSRAALLALAVGAFAIGTTEFAPMGLLPVIADGVGVNIPTAGM
                     LITAYAVGVMLGAPVMTLLMGRFGRRTALMLLMSIFVVGNLLSALAPNYGLLLLSRLV
                     TSLNHGAFFGIGAVVAASLVPKEKQAAAVATMFMGLTIANIGGVPLATWVGQQLGWRL
                     SFAGTAVLGLAAITALGFALPASAPGPRPDVRRELKAILQPQVLLAMGTTVLGAGAMF
                     TLYTYVAPVLTELTGASNAFIAMSLALIGIGFTFGNGIGGRMADWSLDGATRILLAVL
                     AVLMFVLPLAFMSHATAALGVLLFGAATFAIVPPLQIRVMQAASEAPGLASSINVGAF
                     NLGNAVGAALGGAVISSGLGYAAVPVAGGLLAASGLLLAWLGRPRAAVAEAC"
     gene            complement(1363..2112)
                     /locus_tag="QEL58_003798"
     CDS             complement(1363..2112)
                     /locus_tag="QEL58_003798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HDS1678224.1"
                     /translation="MSFEFLADPNAWVTLFTLSALEIVLGIDNLVFISIAVSKLPEER
                     RPFARKLGIAVACITRIALLVSLAYLAHMAANLFTVAGMGISIRDLVLIVGGLFLIIK
                     GFMEIKELISGGEDEDPSTTKASAVFGYVIAQIAVIDIVFSLDSVITAVGIADHIPVM
                     VAAILLSVLVMLLAANPLGRFIDANPTVKMLALAFILLIGAVLILDGLDVHVPKPYIY
                     AAMGFSVLVEWLNLLMRRRAREHNVPGAGNW"
     gene            complement(2146..2541)
                     /locus_tag="QEL58_003799"
     CDS             complement(2146..2541)
                     /locus_tag="QEL58_003799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005408126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase"
                     /protein_id="HDS1678225.1"
                     /translation="MADQFGHLPRGPRRIFQAARWSWQGLRAAWLHESSFRLEVYLLI
                     VLTPVAIWLGQTPVERALMIGSMLLVLAMELANSAIEAVIERYGSEIHELAGRAKDMG
                     SAAVFVLMMNVLLCWALVVVPHALAGSYG"
     gene            2755..3456
                     /locus_tag="QEL58_003800"
     CDS             2755..3456
                     /locus_tag="QEL58_003800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1678226.1"
                     /translation="MSRRRTCLLMLGLLTAAPLAQALSPARPPQVPEQVSNVAWAGDM
                     ARFASADQANPPPRGGIEFIGSSSIRFWESLATDFPGQPVFNRGFGGSEVRDSTWYAD
                     RIVVPYAPCKLFFYAGDNDLNSGRTAVQVRDDVVAFVQRVHRDLPKTKVEYLSIKPSP
                     SRAHLLPAINEANALIKAALAKLPNTGFTDIYTPMLGADGQPDATLFREDMLHMTPAG
                     YAIWTKALAPKVKCD"
BASE COUNT          670 a         1239 c         1171 g          482 t
ORIGIN      
        1 tcccacaccc ctcagcacgc ctcggccacc gcagcgcgcg gacgccccag ccacgccagc
       61 agcaaccccg atgccgccag caacccaccg gccaccggca ccgccgcata gcccagcccc
      121 gagctgatca ccgcgccacc caacgcggca cccaccgcat tgcccaggtt gaacgcaccg
      181 acattgatcg acgacgccag ccccggcgcc tcgctggcag cctgcatcac ccggatctgc
      241 agcggcggca cgatcgcgaa ggtcgccgcg ccgaacagca gtacacccag cgccgccgtg
      301 gcgtggctca tgaaggccag cggcagcacg aacatcagca cggcaaggac cgccagcagg
      361 atccgggtgg cgccatccag cgaccagtcg gccatgcgcc cgccgatgcc gttgccgaag
      421 gtgaagccga tgccgatcag cgccagcgac atcgctatga aggcgttgga agcacccgtc
      481 aactcggtca gcaccggcgc cacgtaggtg tacagcgtga acatcgcacc ggcaccgagc
      541 accgtggtgc ccatcgccag cagcacctgc ggctgcagga tcgccttcag ttcccggcgc
      601 acgtccggac ggggcccggg tgccgacgcc ggcagcgcga agcccagcgc ggtgatcgcg
      661 gccaggccca gcacggcggt gccagcgaag gacaggcgcc agcccagctg ctggccgacc
      721 caggtcgcca gcggcacgcc gccgatgttg gcgatggtca ggcccatgaa catggtggcc
      781 acggcggcag cctgcttttc tttcggcacc aggctggcgg caaccaccgc gccgatgccg
      841 aagaaggcgc cgtggttgag gctggtgacc agccgcgaca gcaacagcag gccgtagttc
      901 ggggccagcg ccgacagcag gttgccgacc acgaagatcg acatcagcag catcagcgcg
      961 gtgcgcctgc cgaaccggcc catcagcagg gtcatcaccg gcgcgcccag catcacgccc
     1021 acggcatagg ccgtgatcag catgccggca gtggggatgt tcacgccgac gccgtcggca
     1081 atgaccggga gcaggcccat cggggcgaac tcggtggtac cgatggcgaa ggcgccgacg
     1141 gcaagggcca gcagagcggc tcgggaattc atggcgggtt cctgcgtggg gcaggccttg
     1201 ggaagagagc gcgtagcctg cgcgcatcgt cctgccggat taagccccgc agcggggaaa
     1261 cactgttgcc cccacttcac aagttgtgcg ttcgccgctt ctgtagagcc cggccctgca
     1321 acgcagaacc cccggcagtg ccgggggttc tggatcacgc gcttaccagt tgccggcgcc
     1381 cggcacgttg tgttcgcgtg cgcggcggcg catcagcagg ttcagccact ccaccagcac
     1441 cgagaagccc atcgcggcgt agatgtaggg cttgggcacg tgcacgtcca ggccgtccag
     1501 gatcagtacc gcaccaatca gcaggatgaa ggccagcgcc agcatcttca ccgtcgggtt
     1561 ggcatcgatg aagcggccca gcgggttggc ggccagcagc atcaccagca ccgacagcag
     1621 gatggcggcg accatcaccg ggatgtggtc ggcgatgccg acggcggtga tcaccgagtc
     1681 cagcgagaac acgatgtcga tcaccgcgat ctgcgcgatg acgtagccga acacggccga
     1741 ggccttggtc gtgctgggat cttcatcctc gccgccgctg atcagttcct tgatctccat
     1801 gaagcccttg atgatcagga acaggccacc gacgatcagc accaggtcgc ggatggagat
     1861 gcccatgccg gccacggtga acaggttggc ggccatgtgc gccagatagg ccagcgacac
     1921 cagcagcgcg atacgcgtga tgcacgccac ggcgatgccg agcttgcgtg cgaacgggcg
     1981 acgctcttcc ggcagcttgc tgaccgcgat ggaaatgaac accaggttgt cgatgccgag
     2041 cacgatttcc agcgcactca gggtgaacag ggtcacccag gcattggggt cggcgaggaa
     2101 ctcaaaggac atggaaactc ttcaaggcag tgggggaatg gggtttcagc cgtagctgcc
     2161 ggccagcgcg tgcggaacca cgaccagcgc ccagcacagc aggacgttca tcatcagcac
     2221 gaacaccgcc gccgaaccca tgtccttggc gcggccggcc agttcgtgga tttcgctgcc
     2281 gtagcgttcg atcaccgcct cgatggccga gttggccaac tccatcgcca gcaccagcag
     2341 catcgagccg atcatcagcg cgcgttcgac cggggtctgg cccagccaga tcgcgaccgg
     2401 ggtcagcacg atcagcaggt agacctccag ccggaacgag gactcgtgca gccaggcggc
     2461 gcgaaggccc tgccaggacc agcgggcggc ctggaagatg cggcgcgggc cgcggggcag
     2521 gtggccgaac tgatcagcca cggcaggaag atccagcaac aggagcgcgg cgcagcgacc
     2581 gctcagacgc acggcaggga atcatgggtg cacaggaata ggcagatggc ggccattttg
     2641 ccacaaggcc gccagccata cccccggcgg cccggccgaa tggcctgcca acggcaagca
     2701 cccggccagc ccctgctcct atgatggagg cttccttccc cgctggagcg cctgatgtcc
     2761 cgtcgccgta cctgcctgct gatgctgggc ctgctgaccg ccgcaccgct ggcccaggcc
     2821 ctgagcccgg ccaggccgcc ccaggtgccc gaacaggtct cgaacgtggc ctgggcgggt
     2881 gacatggccc gcttcgccag cgccgaccag gccaatccgc cgccgcgcgg cggcatcgag
     2941 ttcatcggca gctcctcgat ccgcttctgg gagagcctgg ccaccgactt ccccggccag
     3001 ccggtgttca accgcggctt cggcggctcg gaagtgcgcg acagcacctg gtacgccgac
     3061 cgcatcgtgg tgccgtatgc gccatgcaag ctgttcttct acgccggcga caacgacctc
     3121 aacagcggcc gcaccgccgt acaggtgcgg gacgatgtgg tcgccttcgt gcagcgcgtg
     3181 catcgcgacc tgccgaaaac gaaggtggaa tacctgtcga tcaagccgag cccgtcgcgc
     3241 gcgcacctgc tgccggcgat caacgaggcc aacgcgctga tcaaggctgc cctggcaaag
     3301 ctgcccaaca ccggcttcac cgacatctat acgccgatgc tcggcgccga tggccagccg
     3361 gatgcgacgc tgttccgcga agacatgctg cacatgaccc cggccggcta cgcgatctgg
     3421 accaaggcgc tggcgccgaa ggtgaagtgc gattgaggca ggcgtgcgtc gggcatggcc
     3481 cggcgctacc gcaacttcat ccacgcatgg cgtggatcta ctgccggtcg cgggaaactg
     3541 tcgaaggcgg ggcggtgtgg gt
//
LOCUS       DAOKIP010000300         3546 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.304,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000300 DAOKIP010000000
VERSION     DAOKIP010000300.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 3546)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3546)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3546
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.304"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            1..339
                     /locus_tag="QEL58_003801"
     CDS             1..339
                     /locus_tag="QEL58_003801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014648595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divalent-cation tolerance protein CutA"
                     /protein_id="HDS1678227.1"
                     /translation="MSTVDPVLLLLTTCPDRASAERIAHALVGERLAACVTRLDGAQS
                     TYRWQGEVTTDSELQLLVKTTASRVDDAIARIVELHPYELPECIAVETRAGLPAYLDW
                     IRAQTREDTD"
     gene            336..2720
                     /locus_tag="QEL58_003802"
     CDS             336..2720
                     /locus_tag="QEL58_003802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005411230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-disulfide reductase DsbD"
                     /protein_id="HDS1678228.1"
                     /translation="MKTLFARGAALCALLWLSLPAFALDEKDLLPVDQAFALTATAPE
                     RGQVQLQFKIAPGYYLYRHRTSVKADPAFNAGTLQMPKGDRHHDDFFGEVETYRERLQ
                     ATLPGTPTDAAGTISVEVRYQGCADAGVCYPPQKRVVQVTLPGGGTPAAAPAARTSAG
                     NPFNNPLAGAGSTGGLRLPGAASNSQALPLPSEQAFGFDAIASDGNTLLLRFSPAPGY
                     YLYRDRTSLKLEGSAGVLADKPRWPAAQSHRDEHFGDVSVYFNQVEVPLPLRRTVSEA
                     VDSTLVVTFQGCQTDGICYPPMTRRVKLSIPAGKANASADQAPPRNEVISPLAAGSGA
                     PREAANGAPLRLLPTVPNDGAARPAAAGAEGAGNEFATDAQGDNALRTRPPATTPNPD
                     RSFVWVLLLALAGGLVLNLMPCVLPILSLKVLSLAQSGESPQRARSHALWYTLGVLVA
                     FAVIGALMVGLRAIGNAVGIGFQLQHPGVVAALAYIMFAVGLSLSGVFTLGGGIGNLG
                     QSLASRSGPAGDFFTGALACVVGSACVGPFMGGAIAYAFIAPPLKAMTVFLFLGLGLA
                     LPFLLIGFVPALARRLPKPGPWMETLKHVLAFPMYATALWLLWVLGKQRGVDGMALVL
                     GGLLLLAFGLWLFERNRWTGSRAVTLLGVLLAIGALVPAWGVTQLAAPTRAAQAASEN
                     VVEYSPQLLDRLRADNRVVFVNMTADWCVSCKANERAVLSRPEFKDLLKRTNAVYMRG
                     DYTNVDPQITSFLEEHKAVGVPLYVVYGPGAPPTVLPTLLTQAVVEEALLRTAR"
     gene            2717..3268
                     /locus_tag="QEL58_003803"
     CDS             2717..3268
                     /locus_tag="QEL58_003803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005411231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA family protein disulfide reductase"
                     /protein_id="HDS1678229.1"
                     /translation="MKWQRPALLWTAVLAAGLGLWAGHRLTPGPAASIAPPAAAAKPS
                     LRAGDPMPALSLPDLEGRALDLRQHFAGRPLLINVWASWCGPCIEEMPELARFARLQG
                     SDGVQVLGLALDTPDDVRGFLQRVPVDYPIVIETPGPRDASVQLGNAQGLLPYSVLFD
                     AQGRMVKAKLGPFAHGEIDRWVK"
BASE COUNT          528 a         1221 c         1227 g          570 t
ORIGIN      
        1 atgtcgaccg tcgatcccgt cctgctgctg ttgaccacct gcccggaccg ggccagtgcc
       61 gagcgcatcg cgcacgcgct ggtcggcgag cgcctggccg cgtgcgtgac ccgactcgat
      121 ggcgcgcagt cgacctaccg ctggcagggc gaggtgacca ccgacagcga gctgcagctg
      181 ctggtgaaaa ccaccgcgag ccgcgtcgat gacgcgattg cccggatcgt cgaactgcat
      241 ccgtatgaac tcccggagtg catcgcggtc gaaacccggg ccggcctgcc ggcatatctg
      301 gactggatcc gggcacagac ccgggaggac actgattgaa gactctgttt gcgcgtggcg
      361 ccgccttgtg cgccctgttg tggctctcgt tgccggcctt cgcgctggat gagaaggacc
      421 tgctgccggt ggaccaggcg ttcgcgctga ccgccaccgc ccccgaacgt ggccaggtgc
      481 agctgcagtt caagatcgca ccgggctatt acctgtatcg ccaccgcacc agcgtcaagg
      541 cggaccccgc attcaacgcc ggcacgctgc agatgcccaa gggcgacagg caccacgacg
      601 atttcttcgg cgaggttgaa acctatcgcg agcgcctgca ggccaccctg cccggcacac
      661 ccaccgatgc ggccggcacc atcagcgtgg aagtgcgcta ccagggttgc gccgatgccg
      721 gtgtctgcta cccgccgcag aagcgcgtgg tgcaggtcac cctgccgggc ggcggtacgc
      781 cggctgcggc acccgcggcg cgtaccagtg ccggcaaccc gttcaacaat ccgctggccg
      841 gtgccggcag cacgggcggc ctgcgcctgc cgggtgcggc cagcaacagc caggcgctgc
      901 cgctgccgtc ggaacaggcc ttcggcttcg atgccatcgc cagcgacggc aacaccctgc
      961 tgctgcgttt cagcccggcc ccgggctact acctgtatcg cgaccgcact tcgctgaagc
     1021 tggaaggcag cgccggcgtg ctggccgaca agccgcgttg gccggccgcg cagtcgcatc
     1081 gcgatgaaca tttcggcgat gtctcggtgt acttcaacca ggtggaagtg ccgctgccgc
     1141 tgcgccgcac cgtcagcgag gcggtcgaca gcaccctggt ggtgaccttc cagggctgcc
     1201 agaccgatgg catctgctac ccgccgatga cgcgccgggt gaagctgtcg attccggccg
     1261 gcaaggccaa cgccagcgcc gaccaggcac cgccgcgcaa cgaggtgatc agcccgctgg
     1321 ccgctggcag tggcgccccg cgcgaagcgg ccaacggcgc tccgctgcgc ctgctgccga
     1381 ccgtgcccaa cgacggagct gcccgcccgg ccgccgcagg cgctgagggc gcaggcaatg
     1441 aattcgccac cgatgcgcag ggtgacaacg cgctgcgcac gcgcccgccg gcgaccaccc
     1501 cgaacccgga ccgttcattc gtctgggtac tgttgctggc gctggccggc ggcctggtgc
     1561 tgaacctgat gccgtgcgtg ctgccgatcc tgtcgctgaa ggtgctgagc ctggcgcaga
     1621 gtggcgaaag cccgcagcgc gcgcgcagcc atgcgctctg gtacacgctg ggcgtgctgg
     1681 tcgcgttcgc ggtgatcggc gcgctgatgg tgggcctgcg cgcgatcggc aacgcggtcg
     1741 gcatcggctt ccagctgcag catccgggtg tggtggcggc gctggcctac atcatgttcg
     1801 cggtgggcct gagcctgtcc ggcgtgttca ccctgggcgg cggcatcggc aacctcggcc
     1861 agtcgctggc cagccgcagc ggcccggccg gtgatttctt caccggtgcg ctggcctgcg
     1921 tggtcggcag tgcctgtgtc ggcccgttca tgggcggtgc cattgcctac gccttcattg
     1981 ccccgccgtt gaaggcgatg accgtgttcc tgttcctcgg cctgggcctg gccctgccgt
     2041 tcctgctgat cggcttcgtg ccggcgctgg cgcgccgcct gcccaagccg ggcccatgga
     2101 tggaaacgct caagcacgtg ctggccttcc cgatgtatgc caccgcgctg tggttgctgt
     2161 gggtgctggg caagcagcgt ggcgtggatg gcatggcgct ggtgctgggc ggcctgctgc
     2221 tgctcgcctt cggcctgtgg ctgttcgagc gcaaccgctg gaccggctcg cgcgcggtga
     2281 cgctgctggg cgtgctgctg gccatcggcg cactggtgcc tgcctggggc gtaacccagc
     2341 tggcagcgcc gacgcgtgcc gcacaagcgg ccagcgagaa cgtggtcgag tattcgccgc
     2401 agctgctgga ccgcctgcgc gccgacaacc gcgtggtgtt cgtcaacatg accgccgact
     2461 ggtgcgtgag ctgcaaggcc aatgagcgcg cggtgctgtc gcgaccggag ttcaaggacc
     2521 tgctcaagcg caccaacgcg gtgtacatgc gcggcgacta caccaacgtg gacccgcaga
     2581 tcacctcgtt cctggaagag cacaaggcgg tgggcgtgcc gctgtacgtg gtgtacggcc
     2641 ccggcgcacc gccgaccgtg ctgccgaccc tgctgaccca ggcggtggtc gaggaagcgc
     2701 tgctgcgcac cgcacgatga agtggcaacg gccagcgctg ctgtggacag cggtgctggc
     2761 cgccggcctg ggcctgtggg ccgggcatcg actgacacca gggcccgctg catcgatcgc
     2821 accaccggcg gctgccgcga agccgtccct gcgggcgggc gatccgatgc ccgcgctgtc
     2881 gctgcccgac cttgaaggac gcgcactgga tctgcgccag cacttcgccg gccgcccgct
     2941 gctgatcaac gtgtgggcca gctggtgtgg gccctgcatc gaagaaatgc ccgaactggc
     3001 tcgtttcgcc cgcctccagg gcagcgacgg cgtgcaggtg ctgggcctgg cgctggacac
     3061 cccggacgac gtgcgtggtt tcctgcagcg ggttccggtg gactacccga tcgtgatcga
     3121 gaccccgggc ccgcgcgatg ccagcgtaca gctgggcaat gcgcagggcc tgctgcccta
     3181 cagcgtgctg ttcgatgcgc aggggcggat ggtcaaggcg aagctggggc cgttcgccca
     3241 cggcgagatc gaccgctggg tgaagtgagg gttcggcagg gttgcaccct gcacctgcag
     3301 aggccaccgc aacagccaga gccaaagcgg ctttctgtgg gatggcgggg cggtgtggct
     3361 gtgcaggaca cgccgtaaac ccatccatgg gagctcgatg gcgccatcca tggcgccaac
     3421 ggtccggcac agccacaccg ccccacctcc gacagattcc cgctgcgttg gggatgaatc
     3481 tccatcgaaa tcaaacattt cgacaattga acgaaaagca tccacgcatg gcgtggatct
     3541 acggca
//
LOCUS       DAOKIP010000301         3537 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.305,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000301 DAOKIP010000000
VERSION     DAOKIP010000301.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 3537)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3537)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3537
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.305"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(103..1476)
                     /gene="cycA"
                     /locus_tag="QEL58_003804"
                     /gene_synonym="dagA"
     CDS             complement(103..1476)
                     /gene="cycA"
                     /locus_tag="QEL58_003804"
                     /gene_synonym="dagA"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004139828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-serine/D-alanine/glycine transporter"
                     /protein_id="HDS1678230.1"
                     /translation="MTEPATPPEHLRRSLSNRHLQLIAIGGAIGTGLFMGSGKTISLA
                     GPSIVFVYLIIGAMLFFVMRAMGELLLSNLQYKSFIDFSTDLLGPWAGFFCGWTYWFC
                     WIVTAIADVIAIAAYAQFWFPGLDAWIPALACVLLLLALNLVTVKLFGEMEFWFALIK
                     IVAICALIITGAGLVAWGFTSPSGHTAALSNLWNDGGMFPMGLVGFFAGFQIAVFAFV
                     GIELVGTTAAETADPERNLPKAINSIPVRIIIFYVLALIAIMAVTPWRQVVPDKSPFV
                     QLFVLAGIPAAASLINFVVLTSATSSANSGIFSTSRMLYGLAEEGHAPRGLSRLSRAA
                     VPARGLLFSCLCLLGGTLLIYLIPNLVTAFTLVTTLATVLFIFVWSLILVAYMVYRRR
                     YPERHAASIFKMPGGVAMCWACLVFFAGVLVLLSLQGDTRQALIASPAWFVLLGVGYW
                     VRRRTAK"
     gene            1706..3322
                     /locus_tag="QEL58_003805"
     CDS             1706..3322
                     /locus_tag="QEL58_003805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HDS1678231.1"
                     /translation="MSRLRVIIGGTALALLAAAVPIAVMAYATWDRAVTVEQQRLHDI
                     TLRTLRRSDLSYHEALAALKSAEAGTASGCNEEHIRRMQTLVMTTPSVDQMGYFEGGK
                     LRCTSWGPFHSDVNQPRADHVTSDGAGIAVDVRPEASGRRQVLAILYGSHDVLVDPRR
                     FVDVIVDPNVRLALASPDGRLLAKQDGMDPALLQNLLRNPGEGLDQNTLYATARNEEW
                     LAIATTPRTALAATFRQQAWLFVPLGLLLAAAGAGLVIWLSRRRLSLRGELATAIRRR
                     ELYLHYQPIIELDTGICVGAEALIRWQRPDGTQVRPDLFIPLAEEAGMIADVTDLVIE
                     NVVRDMRELLVADRSAHIAINLAAEDISSGRALKMITRHMAGSGILPQQIWMEATERG
                     FLDLDRARTMLAQARRAGHSVAIDDFGVGFSSLQYLEQLPLDALKIDKSFIDAIGTES
                     ATSPVTPHIIDMAKELGLWVVAEGVETEAQLAYLHSRHVEFGQGWLFSRPLPRDEFVA
                     FHNKRQQRYGAAREHMQNPRSVPIEREGVE"
BASE COUNT          652 a         1183 c         1196 g          506 t
ORIGIN      
        1 acccgccctc gacagtttcc tgcggcggac agtagatcca cgccatgcgt ggatgaaact
       61 tcctggaaac cgtgaatcaa tcgatggagc ggagacgttg ggttacttcg ccgtcctgcg
      121 gcgcacccaa taccccaccc ccagcagcac gaaccatgcc gggctggcga tcagcgcctg
      181 gcgggtgtcg ccctgcaggc tcagcagcac cagcacgccg gcgaagaaca ccaggcaggc
      241 ccagcacata gccacaccgc cgggcatctt gaagatcgag gcggcgtgcc gctccggata
      301 gcggcggcgg tagaccatgt aggccaccag gatcagcgac cagacgaaga tgaacagcac
      361 cgtcgccagc gtcgtcacca gggtgaaggc ggtcaccagg ttgggaatca ggtagatcag
      421 cagcgtgccg cccagcaggc acaggcacga gaacagcagg ccgcgcgccg gcaccgccgc
      481 acgcgacagc cgcgacagcc cgcgcggtgc atggccctct tcggccaggc cgtacagcat
      541 gcggctggtg gagaagatgc cgctgttggc agaggacgtg gccgaggtca gcaccacgaa
      601 gttgatcagg ctggcggcgg cgggaatgcc ggccagcacg aacagctgca cgaacgggct
      661 cttgtccggc accacctgcc gccacggcgt gactgccatg atcgcgatca gcgccagcac
      721 gtagaagatg atgatgcgca ccggaatcga gttgatcgcc ttgggcaggt tgcgctcggg
      781 gtcggcggtt tcggcggcgg tggtgccgac cagttcgatg ccgacgaagg cgaacaccgc
      841 aatctggaaa ccggcaaaga agccgaccag ccccatcggg aacatgccgc cgtcattcca
      901 caggttcgac agcgcagcgg tgtggccgct gggcgaggtg aagccccacg ccaccaggcc
      961 ggcgccggtg atgatcagcg cgcagatcgc cacgatcttg atcagcgcga accagaattc
     1021 catttcgccg aacagcttca ccgtcaccag gttcagtgcc agcaacagca gcacgcaggc
     1081 cagtgccggt atccacgcat ccaggccagg gaaccagaac tgcgcgtagg cggcgatggc
     1141 gatcacatcg gcgatggcgg tcacgatcca gcagaaccag tacgtccatc cgcagaagaa
     1201 gccggcccag ggaccgagca ggtcggtgga gaaatcgatg aaggatttgt actgcaggtt
     1261 ggacagcagc agctcgccca tcgcgcgcat cacgaagaac agcatcgcgc cgatgatcag
     1321 gtagacgaag acgatggacg ggccggccag gctgatggtc ttgcccgagc ccatgaacag
     1381 gccggtgccg atggcaccgc cgatggcgat cagttgcagg tggcggttgg acaggctgcg
     1441 gcgcaggtgc tcggggggcg ttgcgggctc ggtcatgggc gcggaaaagg gcgggcgaag
     1501 cgttcgacgg tagtcctccg cgggccggag cgccagcacc cgacgagctg attccgtcaa
     1561 tcttggccgc attcatcaca atgtgacgaa attccggatt gcgcccattc cgcctggccc
     1621 ggcgccatgc tcagatagcc gcatctgccc aaggaccggc cccgcccatg ccctctgccc
     1681 tgcccctccc gctggagctc cggccatgag ccggctgcgc gtcatcatcg gtggcaccgc
     1741 gctggcattg ctggccgccg ccgtaccgat cgcggtgatg gcctacgcca cctgggaccg
     1801 cgcggtcacg gtcgaacagc agcggctgca cgacatcacg ctgcgcaccc tgcgccgctc
     1861 cgacctgtcc taccacgagg cgctggccgc gctgaagtcg gccgaagccg gtaccgcctc
     1921 cggctgcaat gaagaacaca tccggcgcat gcagacgctg gtgatgacca cgccgtcggt
     1981 ggaccagatg ggctacttcg aagggggcaa gctgcgctgc acctcctggg ggccgttcca
     2041 ctcggacgtg aaccagccca gggccgacca tgtcaccagc gacggcgccg gcatcgcggt
     2101 ggatgtgcgc cccgaagcca gcggccggcg ccaggtgctg gcgatcctgt acggctccca
     2161 cgacgtactg gtcgatccgc gccgcttcgt cgatgtcatc gtcgatccga atgtgcgcct
     2221 ggccctggcc agcccggatg ggcggctgct ggccaagcag gacggcatgg acccggccct
     2281 gctgcagaac ctgctgcgca atcccggcga ggggctggac cagaacacgc tgtatgccac
     2341 cgcgcgcaac gaggaatggt tggcgatcgc caccacgcca cgcaccgcgc tggccgccac
     2401 cttccgccag caggcctggc tgttcgtgcc gctgggcctg ctgctggcgg ccgcgggggc
     2461 cggcctggtg atctggctct cccggcgccg gctgtcgctg cgcggcgagc tggccaccgc
     2521 catccgccgc cgcgagctgt acctgcatta ccagccgatc atcgagctgg ataccggcat
     2581 ctgcgtcggc gccgaggcgt tgatccgctg gcagcgcccg gacggcaccc aggtgcggcc
     2641 ggacctgttc attccgctgg ccgaagaggc tggcatgatc gccgacgtca ccgacctggt
     2701 gatcgagaac gtggtgcgcg acatgcgcga gctgctggtg gccgaccgca gcgcgcacat
     2761 cgcgatcaac ctcgccgccg aggacatcag cagtgggcgt gcgttgaaga tgatcacccg
     2821 gcacatggcc ggcagcggca tcctgccgca gcagatctgg atggaggcca ccgagcgcgg
     2881 cttcctcgac ctggaccgcg cccgcacgat gctggcgcag gcgcgccgcg ccggccacag
     2941 cgtggccatc gatgatttcg gcgtgggctt ttccagcctg cagtacctgg agcagctgcc
     3001 gctggatgca ctgaagatcg acaagtcgtt catcgatgcc atcggcaccg agagcgcgac
     3061 cagcccggtc acgccgcaca tcatcgacat ggccaaggaa ctgggcctgt gggtggtggc
     3121 cgaaggcgtg gaaaccgagg cgcagctggc ctacctgcac agccgccacg tggagttcgg
     3181 gcagggctgg ctgttctcgc ggccgctgcc gcgcgacgag ttcgtggcgt tccacaacaa
     3241 gcgccagcag cgctacggcg cggcgcgcga acacatgcag aatccgcgca gcgtgccgat
     3301 cgagcgtgag ggcgtggagt aggacggcga acggcgaggc ccgtcgtggt gggtcgcgta
     3361 cagctatccc ggagttggcc gggacggtcg ggttcgcggg ggacgccgta aacccatcca
     3421 tgggggcttg gccgccccag cctctgacag gttccggcgg cgtcccacca cggaatcaac
     3481 agaaaaatca aaggcaaacg cgggtcgctg cgctcggtag atccacgtca tgcgtga
//
LOCUS       DAOKIP010000302         3504 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.306,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000302 DAOKIP010000000
VERSION     DAOKIP010000302.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 3504)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3504)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3504
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.306"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            330..1322
                     /locus_tag="QEL58_003806"
     CDS             330..1322
                     /locus_tag="QEL58_003806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014089329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-binding protein"
                     /protein_id="HDS1678232.1"
                     /translation="MNKSNSLAPVLACALLGAGLLGASAPASAGLRDSFANSRTSAQE
                     QSKKGQAEIPVCTKPLGSISVIEPEDVVNWWTGQQLPAPSKLIKVFVNKSKCFTLVDR
                     GVGMAAAQAERALASEGQLRGRSNIGKGQIRAADYVLVPDLISQNSNAGGNAIGGLLG
                     GLIGGKAGAVVSGLNFRSKTADVTLTLTDVRSSEQVAIVEGNSKKTDLGWGAGGGLFG
                     GGGIGAMGVGGYANTEIGQVITLAYLQAYTNMVAELGGLPANASAANSGQAVTMLKAG
                     RLLANAKGTGAPVRSLEPGMLLYPTGVKEGTMWEVEDEMGNKGWVNSTLMETAK"
     gene            1493..1771
                     /locus_tag="QEL58_003807"
     CDS             1493..1771
                     /locus_tag="QEL58_003807"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005411067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbeD family protein"
                     /protein_id="HDS1678233.1"
                     /translation="MEIKSDNPDHGFQFPGQFELSAMGPANRGLEHELPRLLLAAGID
                     VVNERISWKHSSNGKYVSVRIVFKAESREQYDLAHQALRDHPEVKWTL"
     gene            1759..2469
                     /gene="lipB"
                     /locus_tag="QEL58_003808"
     CDS             1759..2469
                     /gene="lipB"
                     /locus_tag="QEL58_003808"
                     /EC_number="2.3.1.181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005411066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl(octanoyl) transferase LipB"
                     /protein_id="HDS1678234.1"
                     /translation="MDAVADSCPAEAAPEDRAPRPAVVRDLGRQAYEPVWRAMQRFTD
                     QRSDADADELWVVEHDPVFTLGQAGKDEHVLAPGEIPVLHVDRGGQVTYHGPGQIVVY
                     PLLRLPRLGIGVRDYVCRIEQALIDTLGEWNIGAERREGAPGVYVGGAKIAALGIRVR
                     RGCTFHGLAFNVSMDLEPFHRINPCGYQGLQVTSVVDLGGPSGMEAVKPVLLDHLARQ
                     FGLLLQHTPELPDLSAAA"
     gene            2488..3498
                     /gene="lipA"
                     /locus_tag="QEL58_003809"
     CDS             2488..3498
                     /gene="lipA"
                     /locus_tag="QEL58_003809"
                     /EC_number="2.8.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019301161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl synthase"
                     /protein_id="HDS1678235.1"
                     /translation="MTETTARSIPLQIVQGDSPTAAPLQAGVKQLGGDKINRSPVQFA
                     DAPVLRKPSWIRVRIPSGNAVQNLKAKLRENRLVTVCEEASCPNIHECFGHGTATFMI
                     LGEVCTRRCSFCDVAHGRPKPPDANEPASLGQTVADMGLKYVVVTSVDRDDLRDGGAQ
                     HFVDCITAIREKSPGTRIEVLTPDFRGKGRMERALEILAQNPPDVFNHNIETVPDLYR
                     NVRPGADYQWSLNLLKNFKAQHPEVPTKSGIMLGLGEEFEQIKATMRDLRAHDVDMIT
                     IGQYLQPTAHHHPVLKYWTPEDYKALEDYGYELGFSHVASGPMVRSSYHADVQAKGAG
                     IS"
BASE COUNT          596 a         1201 c         1156 g          551 t
ORIGIN      
        1 tttgtcgatt tcagccgcga cacggtaccc ccaggtggtc gccaaaacga ccacatggcg
       61 ctcacttgtc tgttccgaaa acaacattgt ccaaccgaca caatgtgata cgtgaagtcg
      121 gggcgggccc gccggctggc gccatcgcct gggttggcca aatctgtcgt catccgcact
      181 tttcagtcag ctgcggttgt ggttgggtcc ctgcatgccc tatcctctgc gccggcgcct
      241 ggggaggcgc caccaaagga ttcaggtccc agaccctttc tcaacccatg gattgtgctt
      301 cgccgtcggc gaagtgctgg atgactcata tgaacaaatc gaattcgctc gcccccgtgc
      361 tggcctgcgc gctgctgggt gccggcctgt tgggcgccag tgccccggcg tcggcgggtc
      421 tgcgcgacag cttcgccaac agccgcacct ctgcccagga gcagagcaag aagggccagg
      481 ccgagattcc ggtctgcacc aagccgctgg gttccatctc ggtgatcgag ccggaagacg
      541 tggtgaactg gtggaccggc cagcagctgc cggcgccttc gaagctgatc aaggtcttcg
      601 tcaacaagtc caagtgcttc accctggtgg accgtggcgt cggcatggcc gctgcccagg
      661 cagagcgtgc gctggccagc gaaggccagc tgcgcggccg ctccaacatc ggcaagggcc
      721 agatccgcgc cgccgactac gtgctggtgc cggacctgat ctcgcagaac agcaacgccg
      781 gcggcaacgc catcggtggc ctgctgggcg gcctgatcgg cggcaaggcc ggtgcggtgg
      841 tcagcggcct gaacttccgc agcaagaccg cggacgtgac cctcaccctc accgacgtgc
      901 gctcctccga gcaggtggcc atcgtcgagg gcaactcgaa gaagaccgac ctgggctggg
      961 gcgccggtgg cggcctgttc ggcggcggcg gcatcggcgc gatgggcgtg ggtggctatg
     1021 ccaacaccga aatcggccag gtgatcaccc tggcctacct gcaggcatac accaacatgg
     1081 tggccgagct gggcggcctg ccggccaatg cctcggcggc caattccggc caggcagtaa
     1141 ccatgctcaa ggccggtcgc ctgctggcca atgccaaggg caccggtgcg ccggtgcgct
     1201 cgctggaacc gggcatgctg ctgtacccca ccggcgtcaa ggaaggcacc atgtgggaag
     1261 tggaagacga aatgggcaac aagggctggg tcaactccac cctgatggaa acggccaagt
     1321 aagccgcctg cgtgccggcc ccgcgccggc acgcgccgcc tgccggggcc ggccttcgtg
     1381 gacggccctg ccaggggcgc ggccccgctg caacgcagcg gctcgccggt gccgcctttg
     1441 actttgatga atactcttgg gtttgttgcc ctgcggcccg ataatggggg gcatggaaat
     1501 caagtccgac aaccccgacc acggcttcca gttccccggc cagttcgagc tcagcgccat
     1561 gggcccggcc aaccgcggcc tggagcatga gcttccccgt ctgctgctgg ctgccggcat
     1621 cgacgtggtg aacgaacgca tcagctggaa gcattcgtcc aacggcaagt acgtgtccgt
     1681 ccgcatcgtg ttcaaggccg agagccgcga gcagtacgac ctggcgcacc aggcgctgcg
     1741 cgaccacccg gaagtgaagt ggacgctgta gccgacagct gcccggccga agccgccccg
     1801 gaagaccgcg cgccgcgccc ggcggtggtg cgtgacctcg gccgccaggc ctatgaaccg
     1861 gtgtggcgcg ccatgcagcg cttcaccgac cagcgcagcg acgccgacgc cgacgagctg
     1921 tgggtggtcg agcacgaccc ggtgttcacc ctgggccagg ccggcaagga cgagcacgtg
     1981 ctggcgccgg gcgagatccc ggtgctgcac gtggaccgcg gcggccaggt gacctatcac
     2041 ggccccggcc agatcgtggt ctacccgctg ttgcggctgc cgcggctggg cattggtgtg
     2101 cgcgactatg tctgccgcat cgagcaggcc ctcatcgata ccctgggcga gtggaacatc
     2161 ggtgccgaac gccgcgaggg cgccccgggc gtctacgtcg gcggcgccaa gatcgccgcg
     2221 ctcggcatcc gcgtgcgccg cggctgcacc ttccatggcc tggccttcaa cgtgtccatg
     2281 gacctggaac ccttccaccg catcaacccc tgtggctatc aggggttgca ggtgacatcg
     2341 gtagtagact tgggcgggcc ctccgggatg gaggccgtca agccggtgct gctggaccac
     2401 ctggcccgcc agttcggcct gctgctgcag cacacgcccg aactgcccga tctttctgcg
     2461 gccgcctgac cgccccccgg aactgccatg actgaaacca ccgcccgttc cattcccctg
     2521 cagatcgtgc agggcgactc tccgaccgcc gcgccgttgc aggccggggt caagcagctg
     2581 ggcggtgaca agatcaaccg ctcgccggtg cagttcgccg atgcgccggt gctgcgcaag
     2641 ccgtcctgga tccgcgtgcg cattccttcg ggcaatgccg tgcagaacct gaaggccaag
     2701 ctgcgcgaga accgcctggt gaccgtgtgc gaggaagcca gctgcccgaa catccacgaa
     2761 tgcttcggcc acggcacggc caccttcatg attctcggcg aggtctgcac ccgccgctgc
     2821 tcgttctgcg acgtggccca cggccgcccc aagccgccgg atgccaacga gccggccagc
     2881 ctgggccaga ccgtggccga catgggcctg aagtacgtgg tggtgaccag tgtcgatcgc
     2941 gatgacctgc gcgacggcgg tgcccagcat ttcgtcgact gcatcaccgc catccgcgag
     3001 aagtcgccgg gtacccgcat tgaagtgctg acccccgatt tccgcggcaa gggccgcatg
     3061 gagcgcgcgc tggagatcct ggcgcagaac ccgccggatg tgttcaacca caacatcgag
     3121 accgtgccgg acctgtaccg caacgtgcgc ccgggcgccg attaccagtg gtcgctgaac
     3181 ctgctgaaga acttcaaggc gcagcacccg gaggtgccga ccaagagcgg catcatgctg
     3241 ggcctgggcg aggagttcga gcagatcaag gccaccatgc gtgacctgcg cgcgcatgac
     3301 gtggacatga tcaccatcgg ccagtacctg cagccgaccg cgcaccacca cccggtgctg
     3361 aagtactgga cccccgagga ctacaaggcg ctggaagact acggctacga gctgggcttc
     3421 agccacgtgg cgtccggccc gatggtgcgc tcgtcgtacc acgccgacgt ccaagccaag
     3481 ggcgccggca tttcctgagg tggg
//
LOCUS       DAOKIP010000303         3498 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.307,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000303 DAOKIP010000000
VERSION     DAOKIP010000303.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 3498)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3498)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3498
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.307"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(49..648)
                     /gene="pdxH"
                     /locus_tag="QEL58_003810"
     CDS             complement(49..648)
                     /gene="pdxH"
                     /locus_tag="QEL58_003810"
                     /EC_number="1.4.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010381128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase"
                     /protein_id="HDS1678236.1"
                     /translation="MSDLYAEALSTFAGLFEEAKQSREVEPNAMTVATADAQGRPSAR
                     TVLLKAFDERGFVFYTHLDSHKGRELQANPQAALLFLWRSLREAGIQVRIEGRVEQVA
                     DAEADAYFASRPRMSQIGAWASQQSKTLATREEFDARVAEIEARFEGKDVPRPEGWSG
                     LRVVPDRIEFWYGAQFRLHERWCYEAGAEGRWSKRLLYP"
     gene            689..1516
                     /locus_tag="QEL58_003811"
     CDS             689..1516
                     /locus_tag="QEL58_003811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="kinase"
                     /protein_id="HDS1678237.1"
                     /translation="MVAAAYMPQVKGFPETLAERVLDDVLGSGTAVPVLAISGLQGSG
                     KSTLAAQVVARAQARGLNAATLSIDDVYLTRVQRQRLARQVHPLLITRGPPGTHDLPL
                     AHAVLDAVAARQPFAMPRFDKLADERLPEAQWPRLQQPLDLLVFEGWFLGTPAQDEEA
                     LESPLNALEREADTDGRWRRWCNQALARDYPALWQRCHRLWFLQPPDFSVVPRWRWQQ
                     EQNLQAAQPGRHGMSRPQLERFVQYYERVSRQALQALPALADHVVVLDGQRQVQGVR"
     gene            complement(1523..1726)
                     /locus_tag="QEL58_003812"
     CDS             complement(1523..1726)
                     /locus_tag="QEL58_003812"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dodecin domain-containing protein"
                     /protein_id="HDS1678238.1"
                     /translation="MTVAKVIEITASSPKSVEDAVRSGLKKVSETVKGIQGAWVNETK
                     VVTNGSGEITEWRVNLRVTFLVE"
     gene            1825..2367
                     /locus_tag="QEL58_003813"
     CDS             1825..2367
                     /locus_tag="QEL58_003813"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006384262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate kinase"
                     /protein_id="HDS1678239.1"
                     /translation="MNPAPNLILIGPMGAGKTCIGRRLAERFTLDFVDVDQAIVDAAG
                     ASIPTIFEHSGEAGFRSHEREALARVLEGRGQLVSTGGGAVLDPGNRALIAQRGFVVY
                     LRVSVAAQLERLARDKGRPLLQRPDREQVLHDLAAHRDPLYRELADLTLDTDPYTAAD
                     ATAHLVVKLATQWQRQDLTA"
     gene            2364..3476
                     /locus_tag="QEL58_003814"
     CDS             2364..3476
                     /locus_tag="QEL58_003814"
                     /EC_number="4.2.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014038140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydroquinate synthase"
                     /protein_id="HDS1678240.1"
                     /translation="MTFPAPLQVAVGGDRPYTITIGAGAQADGAALASHVRGRHVLLL
                     SDSEVAPRYLASVKQTLLAARPDLIIGEHVLAAGEASKTLAEFGRAIEALATLGATRD
                     ACVFALGGGVVGDLAGFAAACWMRGVDCVQLPTTLLAMVDSSVGGKTAVDIPAGKNLV
                     GAFHPPRAVIADTRVLATLPPRELRAGLAEVVKYGALGDAAFFDWLQQNAEALVAGED
                     GVLSEAIARSCRHKAAIVERDPFEKGERALLNLGHTFGHAIETEQGYSAPGRDALNHG
                     EAVAVGMVLAAKLSTDLGLADDADRARLQALLERLGLPVAIPAGLDPQALLGRMRLDK
                     KNVAGRLRLVLWRGMGRAEVVPDVDEAAVLKVLSVR"
BASE COUNT          526 a         1219 c         1191 g          562 t
ORIGIN      
        1 cgagcatggc tcggctctac agaggacacg tcagccgggc cgcgtcattc acggatacaa
       61 cagccgcttg ctccagcgcc cttcggcacc ggcctcatag caccagcgct cgtgcaggcg
      121 gaactgcgcg ccgtaccaga attcgatgcg gtcgggcacc acgcgcaggc cgctccaacc
      181 ctccgggcgc ggcacgtcct tgccctcgaa gcgggcttcg atctcggcca cgcgcgcgtc
      241 gaattcctca cgcgtcgcca gcgtcttcga ctgctgcgag gcccacgcgc cgatctggct
      301 catgcgcggg cggctggcga aataggcatc ggcttcggca tcggcgacct gttcgacacg
      361 gccttcgatg cgcacctgga tacccgcctc gcgcaggctg cgccacagga acagcagcgc
      421 ggcctgcgga ttggcctgca gttcccggcc cttgtggctg tccaggtggg tgtagaacac
      481 gaaaccgcgc tcgtcgaacg ccttcagcag cacggtgcgc gcggaggggc ggccctgcgc
      541 atcagcggtg gccacggtca tcgcgttcgg ctcgacctcg cggctctgtt tggcctcttc
      601 gaacaggccg gcaaacgtgg acagggcttc ggcgtacagg tcgctcatga ttgcgttctt
      661 ctcacacggt ttgggctatt gtggctgcat ggtcgctgct gcgtatatgc cccaggtgaa
      721 aggattcccc gaaacattgg ccgagcgggt tctggacgat gtgctgggca gcggcacggc
      781 agttccagta ttggcgatca gcggcctgca ggggagcggc aaatcgacgc tggccgcgca
      841 ggtggtggca cgcgcccagg cacgcggcct gaacgcggcc acgctgtcga tcgatgacgt
      901 ctacctcacc cgggtgcagc gtcaacggct ggcccgccag gtgcatccgc tgctgatcac
      961 ccgtggccca cccggcaccc acgatctgcc actggcccac gccgtgctcg acgccgtggc
     1021 cgcgcgccag cccttcgcaa tgccacgctt cgacaagctg gccgatgagc gcctgcccga
     1081 ggcgcagtgg cctcgcctgc aacaaccgct ggacctgctg gtattcgaag gctggttcct
     1141 cggcacgccc gcgcaggatg aagaggcgct ggaaagcccg ctgaacgcac tggaacgcga
     1201 ggccgacacc gatggccgct ggcggcgctg gtgcaaccag gcgctggccc gcgactaccc
     1261 ggcgctgtgg cagcgctgcc accgcctgtg gttcctgcag ccaccggact tctcggtggt
     1321 gccgcgctgg cgctggcagc aggaacagaa tctacaggcg gcacagccgg gccggcacgg
     1381 catgagccgg ccgcagctgg agcgcttcgt gcagtactac gagcgggtca gccgtcaggc
     1441 gctgcaggcc ctgcccgccc tggccgacca tgtggtggtg ctggacgggc agcgccaggt
     1501 gcagggcgtg cgctgaggcc acctactcca ccaggaacgt cacccgcagg ttgacccgcc
     1561 attcggtgat ctcgccgctg ccgttggtga ccaccttggt ctcgttcacc caggcgccct
     1621 ggatgccctt gaccgtctcg gaaaccttct tcagcccgct gcgcaccgcg tcctccacac
     1681 ttttcggcga ggaggcggtg atttcgatga ccttggcgac cgtcatggcc tgtactccgg
     1741 ctggcgcggg agaccccgca ggaacgccta ccctgacgtg aagaacgtaa aggccggggc
     1801 acggaggtgt tagcatcaga gggcatgaat cctgctccga acctgatcct gatcggcccg
     1861 atgggcgccg gcaaaacctg catcggccgc cgcctggccg agcgcttcac gctggacttc
     1921 gtcgatgtcg accaggccat cgtcgatgcc gccggcgcca gcatccccac cattttcgag
     1981 cattcgggcg aagccggctt ccgcagccat gaacgcgagg cgctggcacg cgtgctggaa
     2041 ggccgtggcc agctggtctc caccggcggc ggtgcggtgc tggaccccgg caaccgtgcg
     2101 ctgatcgccc agcgcggctt cgtggtctac ctgcgggtca gtgtggccgc gcagctggaa
     2161 cgcctggccc gcgacaaggg ccggccgttg ctgcagcgcc cggaccgcga gcaggtgctg
     2221 cacgatctgg ccgcacaccg cgacccgctg taccgcgagc tggccgacct caccctcgat
     2281 accgacccat acaccgctgc cgacgcgacc gcccatctgg tggtcaagct ggccacgcaa
     2341 tggcagcgcc aggacctgac cgcatgactt tccccgcacc gctgcaggtc gccgttggcg
     2401 gcgaccgtcc ctacaccatc accatcggcg ctggcgccca ggccgacggc gccgcgctgg
     2461 cctcgcacgt acgcggccgc catgtgctgc tgctcagcga cagtgaagtg gcgccgcgct
     2521 atctggcgtc ggtgaagcag acgctgctgg cggcacgtcc cgacctgatc atcggcgaac
     2581 acgtgctggc tgcgggcgaa gcctccaaga ccctggccga gttcggccgc gccatcgaag
     2641 cgctggccac gttgggtgcc acccgcgatg cctgtgtgtt cgcgctgggc ggcggcgtgg
     2701 tcggcgacct ggcgggcttc gctgcggcgt gctggatgcg tggcgtggac tgcgtgcagt
     2761 tgccgaccac cctgctggcg atggtcgatt cgtcggtggg cggcaagacc gcagtggaca
     2821 tcccggctgg caagaacctg gtcggcgcct tccacccgcc acgcgcggtg atcgctgata
     2881 cccgcgtgct ggccaccctg ccaccgcgcg aactgcgtgc cggcctggcc gaagtggtga
     2941 agtacggtgc gctgggcgat gccgccttct tcgactggct gcagcagaat gccgaggcgc
     3001 tggttgctgg cgaagacggc gtgctgtccg aagcgatcgc acgcagctgc cggcacaagg
     3061 ccgcgattgt cgaacgcgat ccgttcgaga agggcgagcg cgccctgctc aacctcggcc
     3121 acaccttcgg ccatgccatc gagaccgaac agggttactc ggcccccggc cgcgatgcgc
     3181 tgaaccacgg cgaagcggtg gcggtgggca tggtgctggc ggcgaagctg tccaccgatc
     3241 tcggcctggc cgacgatgcc gatcgcgctc gcctgcaggc actgcttgaa cgcctcggcc
     3301 tgccggtggc gatcccggcc gggctggacc cgcaggccct gctcggccgc atgcggctgg
     3361 acaagaagaa cgtggccggc cgcctgcgcc tggtgctgtg gcgcggcatg ggccgtgccg
     3421 aagtggtgcc ggacgtggat gaggcagcgg tgctgaaggt gctgtcggtc cgatagtgcc
     3481 tgccgctggt cggcaatc
//
LOCUS       DAOKIP010000304         3495 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.308,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000304 DAOKIP010000000
VERSION     DAOKIP010000304.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 3495)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3495)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3495
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.308"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(80..1798)
                     /locus_tag="QEL58_003815"
     CDS             complement(80..1798)
                     /locus_tag="QEL58_003815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019338714.1"
                     /note="catalyzes the formation of acetate from pyruvate;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinone-dependent pyruvate dehydrogenase"
                     /protein_id="HDS1678241.1"
                     /translation="MSKRVAEIVVDTLQQAGVRRCYGIVGDTLNHVTDAMHGSDIAWV
                     HVRHEEVAAFAAGADSLVSGELTACAGSCGPGGLHFINGIFESNRNRAPMVLIASQIV
                     TSELGMEFPQEVDFKAVYGSCTVFCEQVHSPAQARRVVALACQAAISRRGVAVVILPA
                     DISEAEVKHDVPFSVHYTQPVLRPSDAELQRIAELLGQGKRIGIYAGAGCQGAHPQLL
                     ELARRLQAPVAHTSRAKDFVEPDNPYNMGMTGIFGIESGFHTLMECDTLLLLGADFAW
                     GQFYPDKATIIQVDRDGSHLGRRHPVNLGVVGDIAPTLDALLPMLPPREDSSFLDECV
                     ERRDKALKKREQEEQPGEGELIHPQHLTALLSKYATDDALFTADGGSPMVWVLRHIRV
                     NGRRRTLTSLLHGTMANAMPQALGLQKAFPGRQVISLSGDGGLAMLLGDLLTAVQENL
                     PIKVVVYNNGSLNFVELEQKVEGLLDNYTDLKNPDFGRLAEVIGFHGRTVTRSEDLEE
                     AVQDFLSQRGPALLDVHTSRAELVMPPQIEAKQVAGTALYAAKAVLNGRFDDVKHLLV
                     DNFLKK"
     gene            complement(1928..2785)
                     /locus_tag="QEL58_003816"
     CDS             complement(1928..2785)
                     /locus_tag="QEL58_003816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SH3 domain-containing protein"
                     /protein_id="HDS1678242.1"
                     /translation="MDYREWVLGVVLAGVLAPAAQAGGDGSETLRFQVAAHVQAHADP
                     QQDGSIAVQLSPSGKRQTLAGAADADGNSQWGLEDVDFDGYPELIARASVGMVNEAVA
                     VYRFDPATGGFRALQAETHGKDSCGDLMGLTVDRASRTLTSSCRSGPMWYADQYRFAV
                     SKLYLYRAESVLMLGDTLNAALRWEQSDEQGPLAVWRTYDPAGKVLETAIADGLGAPP
                     GGPLRGQQATVVPARLFLFDKPGASSTQRYLVQGDRVEMLDEQDGWMKLRYQNPKHGA
                     VLGWINLND"
     gene            complement(2822..3304)
                     /locus_tag="QEL58_003817"
     CDS             complement(2822..3304)
                     /locus_tag="QEL58_003817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017156981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3574 domain-containing protein"
                     /protein_id="HDS1678243.1"
                     /translation="MKHLGLVFAVLLATSGCASLSSQAPSAYATATTAELQGDAARPS
                     DGHGWVRSELYFGVGEEQGAGSRPQADTISEAQWRAFLDKEVTPRFPDGLTVFDAYGQ
                     WLFRGDASPNRLRTKVLVVLHEDTPQRRADIEAIRLAWKQQTRHQSVLWSRQPVEVSF
                     "
BASE COUNT          587 a         1219 c         1079 g          610 t
ORIGIN      
        1 tgcccgcttt tgacgttgcg gttgccgttg atgttgattc ggcgggtgca gggcgcagcc
       61 ctgcatcaaa cccaccccgt tacttcttca ggaagttgtc caccagcaga tgcttcacgt
      121 cgtcgaagcg gccgttcaac accgctttgg ccgcatacag cgcggtaccc gcgacctgct
      181 tcgcctcgat ctgcggcggc atcaccagct ccgcgcggct ggtatgcaca tccagcaacg
      241 ccgggccgcg ctgggacagg aagtcctgca ccgcctcttc cagatcctcg ctgcgggtga
      301 cggtgcggcc gtggaagccg atcacctcgg ccaggcggcc gaagtccggg ttcttcaggt
      361 cggtgtagtt gtccagcagg ccttccacct tctgctccag ctcgacgaaa ttcagcgagc
      421 cgttgttgta caccaccacc ttgatcggca ggttttcctg cacggcggtc agcaggtcgc
      481 ccagcagcat cgccaggccg ccgtcgccgg acaacgagat cacctgccgc cccgggaacg
      541 ccttctgcag gcccagcgcc tgtggcatcg cgttggccat cgtgccgtgc aacaggctgg
      601 tcagcgtacg gcggcggccg ttgacccgga tatgccgcag cacccacacc atcggtgagc
      661 caccgtcggc ggtgaacagc gcgtcgtccg tcgcgtattt cgacaacaac gccgtcaggt
      721 gctgtggatg gatcagctcg ccctcgcccg gctgctcttc ctgttcgcgc ttcttcagtg
      781 ccttgtcgcg gcgctcgacg cattcgtcca ggaagctgct gtcctcgcgt ggcggcagca
      841 tcggcaacaa ggcgtccagc gtcggcgcga tgtcaccgac cacgcccagg ttcaccggat
      901 ggcggcggcc cagatggctg ccgtcgcggt caacctggat gatcgtagcc ttgtccggat
      961 agaactggcc ccacgcgaaa tcggcaccga gcagcagcag cgtgtcgcac tccatcagcg
     1021 tgtggaagcc cgattcgatg ccgaagatcc cggtcatgcc catgttgtag gggttgtcgg
     1081 gctcgacgaa gtccttggcg cgcgaggtat gcgcgaccgg cgcctgcagc cgccgcgcca
     1141 gttccagcag ctgcgggtgt gcgccctggc agcctgcacc ggcatagatg ccgatgcgct
     1201 tgccctgccc cagcagctcg gcgatgcgtt gcagttcagc gtcggacggg cgcaacaccg
     1261 gctgggtgta gtgcaccgag aacggcacat cgtgcttcac ttcggcctcg ctgatgtcgg
     1321 ccggcaggat caccaccgcc acaccgcggc ggctgatcgc ggcctggcag gccagtgcca
     1381 ccacgcgccg cgcctgcgca gggctgtgca cctgttcgca gaacaccgtg cagctgccat
     1441 agaccgcctt gaaatccact tcctgcggga actccatgcc cagctcgctg gtgacgatct
     1501 ggctggcgat cagcaccatc ggcgcacgat ttcgattgct ctcaaagatg ccgttgatga
     1561 agtgcaggcc accggggcca caggaaccgg cgcaggcggt cagttcgcca cttaccagcg
     1621 aatcggcacc ggcagcgaac gcggccactt cctcatggcg tacgtgcacc caggcaatgt
     1681 cgctgccatg catcgcatcg gtcacatggt tgagcgtatc gcccacgatg ccataacagc
     1741 ggcggacgcc tgcctgctgc agagtgtcca ccacaatctc ggccacgcgc ttgctcatcg
     1801 gatacatcct cgaacggggg aacgtccgag gctagaccca gtgaagtgat gcttccgcaa
     1861 aaaaagggga cggagggaat taagtcgttt gtgccataaa cggcttaatt ccctccgtcc
     1921 ccttttttca atcgttgagg ttgatccagc ccagcaccgc accgtgtttc ggattctggt
     1981 agcgcagctt catccatcca tcctgttcat ccagcatttc cacacggtcg ccctgcacca
     2041 ggtaacgctg ggtgctggac gcgccgggct tgtcgaacag gaacaggcgc gcgggcacca
     2101 cggtcgcctg ctgaccacgc agcggcccgc caggcggtgc gcccaggcca tcggcgatgg
     2161 cggtctccag cacctttcca gcggggtcat aggtccgcca gaccgccagc gggccctgct
     2221 cgtcgctctg ctcccaacgc agcgcggcgt tcagcgtgtc gcccagcatc aagacgctct
     2281 cggcgcggta cagatagagc tttgaaactg caaaccggta ctggtcggcg taccacatcg
     2341 ggccactgcg gcagctgctg gtgagggtgc ggctcgcacg atcgaccgtc agccccatca
     2401 ggtcaccgca gctgtccttg ccgtgggttt cagcctgcag cgcgcggaac ccgccagttg
     2461 ccggatcaaa gcggtacacc gccaccgctt cattgaccat gcccaccgat gcgcgtgcga
     2521 tcagctccgg gtaaccatcg aagtcgacgt cctccagacc ccactgcgaa ttaccgtccg
     2581 catccgccgc gccggccagc gtctggcgct tgcccgacgg cgaaagctgc accgcgatgc
     2641 tgccatcctg ctgcggatcg gcgtgcgcct gcacgtgggc ggccacctgg aaccgcagcg
     2701 tttcgctgcc gtccccgccc gcctgcgcgg ccggggccag cacgcctgcc agcaccacgc
     2761 ccagcaccca ctccctgtaa tccatcatcg ctccctgcgg caccgcggcg gcaccttcaa
     2821 ctcagaacga tacctcgacc ggctgccgcg accacagcac cgactgatgc ctggtctgct
     2881 gcttccaggc caggcggatc gcctcgatgt cggcccggcg ctgcggggtg tcctcgtgca
     2941 gcaccaccag caccttggtg cgcaggcggt tgggcgaggc atcgccgcgg aacagccact
     3001 ggccgtaggc atcgaacacg gtcaggccat ccgggaagcg cggggtcact tccttgtcca
     3061 ggaacgcgcg ccactgcgcc tcgctgatgg tgtcggcctg cggacggctg cctgcgccct
     3121 gctcttcgcc cacgccgaaa tacagttcgc tgcgcaccca gccgtggccg tcggacgggc
     3181 gcgccgcatc gccctgcagt tcggcggtgg tggccgtggc atacgcactg ggcgcctgcg
     3241 aggacaggct ggcgcagccg ctggtggcca gcagcacggc aaagacgagg ccaaggtgtt
     3301 tcatcggtac agctccgggc aaataggggg acagggcgag ccggcagcgt acagcgccac
     3361 cggcccggcg tgctgatgcc aaccgggcat cagctcatgc cggaccggca ggggcttgcg
     3421 ccggcagtgg tcatcacgcg aagataatat atcgcttcat ccggatggat gtaagtgaaa
     3481 ctatctcccc cttcc
//
LOCUS       DAOKIP010000305         3487 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.309,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000305 DAOKIP010000000
VERSION     DAOKIP010000305.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 3487)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3487)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3487
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.309"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(39..605)
                     /locus_tag="QEL58_003818"
     CDS             complement(39..605)
                     /locus_tag="QEL58_003818"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005412776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HDS1678244.1"
                     /translation="MPNPLLPGLQVQPLPYHDRLPLRDPATLEMVVIHCTELPDLAMA
                     REYGERVLYDSGAGNSGHFYIDRDGRVVQYVAPERVAHHVRGMNAQTLGIELVNTGRY
                     PDWFDSRHQAMDEPYTEAQLVALEHLLLALVAHYPSLRRIAGHDQLDLEQVVASDDPT
                     LRVARKRDPGPLFPWARILAKVPLQSVG"
     gene            678..1205
                     /locus_tag="QEL58_003819"
     CDS             678..1205
                     /locus_tag="QEL58_003819"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007966252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1678245.1"
                     /translation="MSRGHCILSHGFESGPEAIKVTALAEVAQRLGWTHERPDYTDLD
                     AMSEVSRVGDVPTRLRRLVERAAIAAGQGPVVLAGSSLGAYISAIASLQVPVAGLFLM
                     VPPTTMGPMPALDAAAVPTTVVQAWHDDVVPAAGVIAWAQARSAQLLLVDDGHRLEHH
                     VEASAQAFERLLRQL"
     gene            1351..>3487
                     /gene="rlmKL"
                     /locus_tag="QEL58_003820"
     CDS             1351..>3487
                     /gene="rlmKL"
                     /locus_tag="QEL58_003820"
                     /EC_number="2.1.1.173"
                     /EC_number="2.1.1.264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 23S rRNA
                     (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA
                     (guanine(2445)-N(2))-methyltransferase RlmL"
                     /protein_id="HDS1678246.1"
                     /translation="MKFFVSCAKGLEYLLADELSALGLGKATATIAGVNADGELEQAL
                     RIVMWSRLASRVLWPIDEFECPDEQALYDGVRALPWHEHIKPEMTLAVDAHVSGDKIT
                     HARFAAQRIKDAIVDRMRDEGLERPSVNTDLPDVRVNLSLRKGRASLSIDLGGGPLHR
                     RGWRGAAHEAPLKENLAAALLLRAQWPRLHAAGGGLLDPMCGSGTLLIEGALMAADVA
                     PGLMRHGSLPPSRWLGFDKAAWKAIQSEARDREAAGLAALKPVIHGSDIDPTAIQAAR
                     ENAEVAGVAHAIRFTRADVADLAAPEQEIGAVVCNPPYDERLAADPALYRALGNALQK
                     AVPQWRASLLCGNDELAFATGLRAGKKYQMFNGALECALIVCDPIAVPGRDPAQPREL
                     SEGAQMVANRLRKNLKKFKSWRAREDITCFRAYDADLPEYAAAIDVYEEDGGQRRTFL
                     HVQEYAAPAAIPENDVRRRRNELLAAAREVFGVPPQQVSMKSRERGKGGSKYGRFEQR
                     DEFIVVRENNALLQVNLFDYLDTGLFLDHRPLRRMMAEQVRGKRFLNLFCYTGVASVQ
                     AAVAGAASTTSVDLSATYLQWCYDNLALNGQGGNQHLLVQADAMAWLEGDRGQYDVIF
                     CDPPTFSNSARADDFDVQREQVKLLRAAVARLAPGGVLYFSNNFRRFKLEENAIAEFA
                     QCREITARTIGPDFERNARIHRAWELKQLG"
BASE COUNT          537 a         1232 c         1196 g          522 t
ORIGIN      
        1 gacgttgcct ctgcgggtgc agggcgcagc cctgccgatc aacccaccga ctgcagcggc
       61 accttcgcca gaatcctcgc ccacggaaac aacggccccg gatcacgctt gcgcgccact
      121 cgcagcgttg gatcgtcgct ggccactacc tgctccagat ccagctggtc gtgcccagca
      181 atccgccgca gcgacggata gtgcgccacc agcgccagca gcaggtgttc caacgccacc
      241 agctgcgcct cggtgtacgg ctcgtccatc gcctggtggc ggctgtcgaa ccagtccggg
      301 taacgcccgg tattgaccag ctcgataccc agcgtctgtg cgttcatgcc gcgcacgtgg
      361 tgggccaccc gttccggtgc cacgtactgc accacgcgac cgtcgcgatc gatgtagaag
      421 tggccgctgt tgccggcgcc actgtcgtac agcacgcgct cgccgtactc gcgggccatc
      481 gccaggtcgg gcagctcagt gcagtggatc accaccatct ccagcgtggc cgggtcgcgc
      541 agcggcaggc ggtcgtggta gggcaggggc tgcacttgca ggccgggcag gagcgggttg
      601 ggcatccggc gatgctagca ttgcggcatg aacctgcctt ccctttcctc atcggcccgc
      661 tcgcgcggag cgcgcgcatg agccgcggcc actgcatcct gtcgcacggt ttcgagagcg
      721 gcccggaagc gatcaaggtc accgcactgg ccgaggtggc gcagcgcctg ggctggaccc
      781 acgaacgccc cgactacacc gacctggacg cgatgagcga ggtcagccgg gtgggcgacg
      841 tgccgacccg gctgcgccgc ctggtcgagc gtgccgccat tgctgccggg caggggccgg
      901 tggtgctggc cggctccagc ctcggtgcct acatttccgc catcgcctcg ctgcaggtgc
      961 cggtggccgg cctgttcctg atggtgccgc cgaccaccat gggccccatg ccggcgctgg
     1021 atgccgccgc ggtaccgacc acggtggtcc aggcctggca tgacgacgtg gtcccggccg
     1081 ccggagtgat cgcctgggcc caggcgcgct cggcgcagct gttgctggtc gatgatgggc
     1141 accgccttga gcaccacgtg gaggcctccg cgcaggcctt cgagcgcctg ctgcgccagc
     1201 tgtgaagccc gggcgcacgg cgcgcccgcc cgctttgact acaatggcag ccccgccgcc
     1261 cccggcgcgg gcctgccggc cgtgcctacg gccctccttt ccgactggcc cggcccctgt
     1321 gccgcgcccg accacctgcg aaccgatccc gtgaaattct tcgtctcctg cgccaagggc
     1381 ctggaatacc tgcttgccga tgaactgtcg gccctgggcc ttggcaaggc cactgccacc
     1441 attgccggcg tcaacgccga cggcgaactg gagcaggcgc tgcggatcgt catgtggtcg
     1501 cgcctggcca gccgcgtgct gtggccgatc gacgagttcg agtgcccgga cgagcaggcc
     1561 ctgtatgacg gcgtgcgtgc gctgccgtgg cacgagcaca tcaagccgga gatgaccctg
     1621 gcggtggacg cgcacgtgtc cggtgacaag atcacccatg cgcgcttcgc ggcgcagcgg
     1681 atcaaggacg ccatcgtcga ccgcatgcgt gacgaaggcc tggaacgccc gtcggtcaac
     1741 accgacctgc cggatgtgcg cgtgaacctg tcgctgcgca agggccgcgc ctcactgtcg
     1801 atcgacctgg gcggcggccc gctgcaccgc cgtggctggc gcggtgccgc ccacgaggcg
     1861 ccgctgaagg aaaacctggc cgccgcgctg ctgctgcgcg cgcagtggcc gcgcctgcac
     1921 gccgccggtg gcggcctgct ggacccgatg tgcggtagcg gcacgctgct gatcgagggc
     1981 gcgctgatgg ccgccgacgt tgcccccggc ctgatgcgcc acggcagcct gccgcccagc
     2041 cgctggctgg gcttcgacaa ggccgcctgg aaggccatcc agagcgaggc acgtgaccgc
     2101 gaagcggccg gcctggcagc gttgaagccg gtcatccacg gcagcgacat cgacccgacc
     2161 gcgatccagg cggcgcgcga gaatgccgaa gtagcgggcg tcgcccatgc gatccgcttc
     2221 acccgcgccg acgtggccga cctggccgcg ccggagcagg agatcggcgc ggtggtctgc
     2281 aacccgccgt acgacgagcg tctggcggcc gatccggcgc tgtaccgcgc gctgggcaat
     2341 gccctgcaga aggcggtgcc gcagtggcgc gccagcctgc tgtgcggcaa cgacgaactg
     2401 gccttcgcca ccggcctgcg cgccggcaag aagtaccaga tgtttaacgg tgcgctggag
     2461 tgcgcgctga tcgtctgcga cccgatcgcc gtgccgggcc gcgacccggc gcagccgcgc
     2521 gagctgagcg aaggtgcgca gatggtggcc aatcgcctgc gcaagaacct gaagaagttc
     2581 aagagctggc gcgcccgcga ggacatcacc tgcttccgcg cctacgatgc cgacctgccg
     2641 gagtacgcgg ccgccatcga cgtctacgag gaagacggtg gccagcgccg cacgttcctg
     2701 cacgtgcagg aatatgcggc accggcggcg attccggaaa acgacgtgcg ccgtcgccgc
     2761 aacgagctgc tggcggccgc gcgtgaagta ttcggcgtgc cgccgcaaca ggtgtcgatg
     2821 aagtcgcgcg agcgtggcaa gggcggcagc aagtacggcc gcttcgaaca gcgcgacgag
     2881 ttcatcgtgg tgcgtgagaa caacgcgctg ctgcaggtga acctgttcga ttacctggat
     2941 accggcctgt tcctcgacca tcgcccgctg cgccggatga tggccgagca ggtgcgcggc
     3001 aagcgcttcc tcaacctgtt ctgctacacc ggcgtggcca gcgtgcaggc ggccgtggcc
     3061 ggtgccgcca gcaccaccag cgtcgacctg tcggccacct acctgcagtg gtgctacgac
     3121 aacctggcgt tgaacgggca gggcggcaac cagcacctgc tggtgcaggc cgacgccatg
     3181 gcgtggctgg aaggcgaccg tggacagtac gacgtgatct tctgcgatcc gccgaccttc
     3241 tccaattccg cacgcgccga tgacttcgac gtgcagcgcg aacaggtgaa gctgctgcgc
     3301 gctgcggtgg cacggctggc accgggcggc gtgctgtact tctccaacaa cttccgccgc
     3361 ttcaagctgg aagagaacgc catcgccgaa ttcgcccagt gccgcgagat caccgcgcgc
     3421 accatcggcc cggatttcga gcgcaacgcg cgcatccacc gcgcgtggga attgaagcag
     3481 ttggggt
//
LOCUS       DAOKIP010000306         3473 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.310,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000306 DAOKIP010000000
VERSION     DAOKIP010000306.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 3473)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3473)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3473
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.310"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..2477)
                     /gene="ligD"
                     /locus_tag="QEL58_003821"
     CDS             complement(<1..2477)
                     /gene="ligD"
                     /locus_tag="QEL58_003821"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005411797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA ligase D"
                     /protein_id="HDS1678247.1"
                     /translation="MSLHQYRRKRRLGRGSGQTPEPDDTPAHGDPKRRPTFVIQLHHA
                     SSRHYDFRLEMDGVLKSWAVPKGPSLRVGEKRLAVEVEDHPLSYAGFEGDIPEGHYGA
                     GHVEVFDHGTWACEGDPLQALAAGKIDFVLHGQRLAGGWKLVRTAMKGRQVQWLLIKR
                     DDEQARDAEADDLLEAPVPKRSSEVKARTAGRTERATPAARRATRKADARWHARALKL
                     DGARDTPYPRAFKPQLTDHRDTAPDGEHWLHEIKWDGYRLLAGLHDGEVKLRSRNGLD
                     WTADFPEVVQAIRALPVRDARLDGELVVLDAQGRSDFAALQRVIDGSSKQPLRYIVFD
                     LPGVAGADISRAPLLERKALLKALLGNVPGILAFSEHVIDHGPQVFAASGKAGFEGIV
                     SKQVDAPYVNARARSWVKVKHEDTDEFVIVGHTAPKGSRVGFGSLLLAAQDKAGLRYV
                     GRVGTGFDDERLRALHKALQPLAVKAPVLPLPAHVPFSASSVRWVKPVAVAEVAFRGW
                     GKEGLLRQASFKRLRNDKQVEDLEVNAADVDTVGEVQITHPERVVFPDQKLSKGDVAD
                     YYRQMARWILPEIAGRPLSVLRCPDGVGKTCFFQKHHGPGLGDAVHAVPLQQKSGRED
                     YVYIDNARGLLQLVQMNTLELHPWGATVDDPEHPDRLVFDLDPGDGVSWAQVKAGARD
                     VRDRLLQIGLQSFVRLSGGKGVHVVVPLQPKADWEQAKAFCEAFAQAMALQQPDRYVA
                     TMSKAKRSGVIFIDWLRNTRGATSVCSWSLRARANAGVAVPLRWEELAKVTAADAFPM
                     ARALARAKRLKGDPWQGMERLKQTLPSL"
     gene            complement(2481..3386)
                     /locus_tag="QEL58_003822"
     CDS             complement(2481..3386)
                     /locus_tag="QEL58_003822"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005421168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ku protein"
                     /protein_id="HDS1678248.1"
                     /translation="MARPIWTGTLSFGLLNVPVSLMSGERKVDLQFRMLDSRDRKPIR
                     FERVNADTGEEVPWKDIVKAYEYDKGSYVVLEEGDIRSAAPESHEAVEVESFVDAAQI
                     DPRYYEKPYLLVPGKKAEKGYVLLRETLRRTGKVGIARVVVRTREYLCAVMPQADALV
                     LMILRYPQELVDPEDYALPAGKLSDYRITGKESAMAEQLIESMAGDWDPSQYHDEFRE
                     RLQQVLNKRIKSKGGTTRVEEEPAPHEDAATNVVDFMALLQKSLDANTRTPAKKTAAR
                     KAPAKKVAKKAVKKAVKKTTRRKAG"
BASE COUNT          545 a         1239 c         1043 g          646 t
ORIGIN      
        1 agcgacggca gtgtctgctt caatcgttcc atgccctgcc aggggtcgcc cttcagccgt
       61 ttcgcgcgcg ccagagccct ggccatcggg aacgcatcgg cggcggtcac ctttgccagt
      121 tcctcccagc gcaacggcac cgccacgcca gcgttcgcgc gcgcccgcaa tgaccacgaa
      181 cacacgctgg tagcaccgcg cgtgttacgc agccaatcga tgaagatcac accgctgcgc
      241 ttcgccttgc tcatcgtcgc tacgtagcga tcaggctgct gcagcgccat cgcctgcgcg
      301 aacgcctcgc agaacgcctt ggcctgctcc cagtccgcct tcggctgcag cggcaccacc
      361 acgtgcacgc ccttgccgcc agacagccgc acgaagctct gcaggccgat ctgcagcagg
      421 cggtcacgca catcgcgggc accggctttc acctgcgccc agctcacgcc gtcgccgggg
      481 tcgagatcga acaccaggcg gtccggatgc tccgggtcgt ctaccgtcgc accccacgga
      541 tgcagctcca gcgtgttcat ctgcaccagc tggagcaggc cacgcgcgtt gtcgatgtag
      601 acgtagtcct cgcgtccgct cttctgctgc aggggcaccg catgcacggc atcacccagc
      661 ccggggccat ggtgcttctg gaagaagcag gtcttgccga caccgtcggg acagcgcagc
      721 actgacaacg gcctgccggc aatctccggc aggatccagc gcgccatctg ccggtagtag
      781 tcggccacgt cgcccttgct gagtttctga tccgggaata ccacgcgttc ggggtgcgtg
      841 atctgcacct cgcccacggt gtccacgtct gcagcgttca cttccaggtc ctccacctgc
      901 ttgtcgttgc gcagccgctt gaagctggcc tggcgcagca gtccttcctt gccccagcca
      961 cggaaggcga cctcggccac cgccaccggc ttcacccagc gcacgctgga cgcactgaac
     1021 ggcacatgcg ccggcaacgg cagtacgggg gccttcaccg ccagcggctg cagtgccttg
     1081 tgcagcgcgc gcaggcgttc atcgtcgaag ccggtgccta cgcgaccgac atagcgcagg
     1141 ccggccttgt cctgcgcggc cagaagcaac gagccgaatc ccacccgcga acccttgggt
     1201 gccgtgtgac cgacgatcac gaactcgtcg gtgtcctcgt gcttgacctt gacccagctg
     1261 cgcgcacggg cattcacata cggagcatcc acctgcttgc tcacgatgcc ctcgaaaccc
     1321 gccttgccac tggcagcgaa cacctgtggc ccgtgatcga tcacatgctc gctgaaggcg
     1381 aggatgccgg gtacattgcc cagcagcgct ttcagcagcg ccttgcgttc cagcaggggc
     1441 gcgcggctga tgtcggcacc ggcaacacct ggcaggtcga agacgatgta gcgcagcggc
     1501 tgtttcgaac tgccgtcgat cacccgttgc agtgccgcga agtcactgcg gccctgcgca
     1561 tccagtacca ccagttcacc gtccaggcgc gcatcgcgca ccggcagcgc ccggatggcc
     1621 tgcacgactt cgggaaaatc ggccgtccag tccaggccgt tgcgcgagcg cagtttcact
     1681 tcgccatcgt gcaggcctgc cagcagacgg tagccgtccc acttgatctc atgcagccag
     1741 tgctcgccat ccggcgcggt gtcgcggtga tcggtcaatt gcggtttgaa ggcgcggggg
     1801 tagggcgtgt cacgtgcgcc gtccagtttc agcgcccgcg catgccagcg tgcatcggcc
     1861 ttgcgggtag ccctgcgtgc ggccggcgta gcgcgctctg tccttcctgc cgtgcgcgcc
     1921 ttcacctcgg atgagcgttt cggcacgggc gcttccaata gatcgtccgc ttcggcatca
     1981 cgcgcttgct catcatcgcg cttgatcagc agccattgca cctggcgccc cttcatcgcc
     2041 gtgcgcacca gcttccaacc gccggccaac cgctggccgt gcagcacgaa gtcgatcttg
     2101 cccgccgcca gcgcctgcaa tggatcacct tcacaggccc aggtgccatg atcgaagacc
     2161 tccacatggc ccgcgccgta atggccttcg ggaatgtcgc cctcgaagcc ggcgtaggac
     2221 agcggatggt cttccacttc caccgccaac cgcttctcgc caacgcgcag cgaaggcccc
     2281 ttcggcacgg cccagctctt cagtacaccg tccatttcca ggcggaaatc gtagtggcgc
     2341 gaactggcgt gatgcagctg gatgacgaac gttggccgtc gcttcgggtc accgtgggcg
     2401 ggggtgtcgt caggctccgg cgtctgaccg ctacctctgc cgaggcgacg cttgcgccgg
     2461 tactggtgca gcgacatggc tcaacctgcc ttgcgccgcg tggtcttctt gacggccttc
     2521 ttgacggcct tctttgccac cttcttcgca ggcgccttgc gggccgcagt cttcttcgcc
     2581 ggtgtgcgcg tgttcgcatc caggcttttc tgcagcagcg ccatgaagtc gaccacattg
     2641 gtggccgcat cctcatgcgg cgccggctcc tcttccaccc gggtggtgcc gcccttggac
     2701 ttgatgcgct tgttcagcac ctgctgcagg cgctcgcgga actcgtcgtg gtactgcgag
     2761 gggtcccagt cgccagccat cgactcgatc agctgctcgg ccattgccga ttccttgccg
     2821 gtgatgcggt agtcggacag tttcccggcg ggcagcgcgt agtcctccgg gtccaccagc
     2881 tcctgtggat agcgcaggat catcagcacc agcgcgtctg cctgcggcat caccgcgcac
     2941 aggtactcac gcgtgcgtac caccacccgc gcgatgccga ccttgccggt cctgcgcagg
     3001 gtctcgcgca gcagcacata gcccttctcg gccttcttgc ctggcaccag cagatacggc
     3061 ttctcgtagt agcgcggatc gatctgcgcc gcatccacga acgattccac ttccaccgct
     3121 tcgtggcttt ccggcgcagc cgagcggatg tcgccttcct ccagcacgac atagctgccc
     3181 ttgtcgtact cgtaggcctt gacgatgtcc ttccagggca cttcctcgcc ggtatcggcg
     3241 ttgacccgct cgaaccggat cggcttgcgg tcgcgcgaat cgagcatgcg gaactgcagg
     3301 tcgaccttgc gttcgccgga catcagcgac accggcacat tgagaagacc gaacgacagc
     3361 gtgccggtcc agattgggcg ggccatggag atacctgtga cggggcaggg gacagccagc
     3421 ttcagtccgg cgatgtaaac cacccgtgtc ggtgccgtgc acgtgggttc tac
//
LOCUS       DAOKIP010000307         3459 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.311,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000307 DAOKIP010000000
VERSION     DAOKIP010000307.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 3459)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3459)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3459
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.311"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..847)
                     /locus_tag="QEL58_003823"
     CDS             complement(<1..847)
                     /locus_tag="QEL58_003823"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019338642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pirin family protein"
                     /protein_id="HDS1678249.1"
                     /translation="MSFPEPVRVLRTIRGMPTSDGAGVRLTRVIGGPTLPDLDPFLLL
                     DEFGTDRAEDYIAGFPEHPHRGFETVTYMLDGRMRHRDNHGNEGLLTPGSVQWMTAGR
                     GLVHSEMPEQESGQMRGFQLWVNLPAKDKMTEPKYQEFAPERIPRVQPAAGVEVKVIA
                     GSVDGTRGPIVQPATDPLYLDITLAPDRAWTYALPEGHNAFAYVFEGAMTVGEQDAAR
                     DVARQELAVLGGGEQLHISAGRDGARLILVAGRPLREPVMRHGPFVMNTRQELMQAFV
                     DFQEGR"
     gene            1063..3144
                     /locus_tag="QEL58_003824"
     CDS             1063..3144
                     /locus_tag="QEL58_003824"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002802008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon starvation protein A"
                     /protein_id="HDS1678250.1"
                     /translation="MKGFSKLGWAVLALLGAFCLGTVALRRGEHINALWIVVAAVSLY
                     LVAYRFYSLFIANKVMQLDPTRATPAVINNDGLDYVPTNKHVLFGHHFAAIAGAGPLV
                     GPVLAAQMGYLPGLLWLVVGVVLAGAVQDFMVLFLSSRRNGRSLGDLVREEMGQVPGT
                     IALFGAFLIMIIILAVLAMVVVKALAESPWGMFTVIATMPIAILMGVYMRYIRPGKIG
                     EISIVGLILLLAAIWFGGKVAADPTWGPAFTFTGTQITWMLIGYGFVASVLPVWLLLA
                     PRDYLSTFLKIGTIIALAIGILVVMPELKMPALTQFAASGDGPVWKGGMFPFLFITIA
                     CGAVSGFHALISSGTTPKLLANEAHMRYIGYGGMLMESFVAVMALVAASIIDPGIYFA
                     MNSPAAVIGPDVVSAAHYITNTWGFTITPEQLTATAAAIGEPTILHRAGGAPTLAVGI
                     AQILHQAIPSSSDAMMAFWYHFAILFEALFILTAVDAGTRAGRFMLQDLLGNFVPALK
                     KTESWTANIIGTAGCVALWGYLLYTGVVDPFGGIQTLWPLFGISNQMLAGIALMLGTV
                     VLFKMKRDRYAWVTAVPAVWLLICTTYAGFIKIFDSNPAQGFLAQAHKFQAALASDTI
                     TAPAKSVAQMKQIVVNAYVNTGLTALFLLVVGAVLVYSIKTILAARRNPQRSDRETPY
                     VALKPHEMVDL"
     gene            3144..3368
                     /locus_tag="QEL58_003825"
     CDS             3144..3368
                     /locus_tag="QEL58_003825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014508400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative selenoprotein"
                     /protein_id="HDS1678251.1"
                     /translation="MSTQLVPAGQYQAHRRIWRRLVQTARLCCGIPDYDNYVRHMLEK
                     HPDQEPMDYKTFFRERQEARYGGRNGGRCC"
BASE COUNT          556 a         1141 c         1108 g          654 t
ORIGIN      
        1 acctgccttc ctggaaatcg acgaaggcct gcatcagctc ctgacgtgtg ttcatcacga
       61 acgggccgtg ccgcatcacc ggctcgcgca gcggacggcc ggccaccagg atcaaccgcg
      121 cgccatcacg gccggccgag atgtgcagct gctcgccacc gcccagcacc gccagttcct
      181 ggcgcgccac gtcacgcgcg gcgtcctgct cgcccaccgt catcgcacct tcgaatacat
      241 aggcaaacgc gttgtgccct tccggcagtg cgtaggtcca ggcgcggtcg ggcgccagcg
      301 tgatgtccag gtagagcgga tcggtggccg gctgcacgat cggcccgcgg gtaccgtcga
      361 cgctgccggc aatcaccttc acctccacgc cggcggccgg ctgcacccgc ggaatgcgct
      421 cgggcgcgaa ctcctggtac ttcggctcgg tcatcttgtc cttcgccggc agattcaccc
      481 acagctggaa accgcgcatc tgcccgcttt cctgttcggg catctccgaa tgcaccaggc
      541 cgcgccccgc cgtcatccac tgcacgctgc ccggggtcag caggccttcg ttgccgtggt
      601 tgtcgcggtg ccgcatgcgc ccgtcgagca tgtaggtcac cgtctcgaaa ccacggtgcg
      661 gatgctccgg gaaacctgcg atgtagtcct cggcgcggtc ggtgccgaat tcatcgagca
      721 gcaggaacgg atccaggtcg ggcagcgtcg ggccgccgat gacgcgggtc aggcgcacgc
      781 cggcaccatc ggaggtgggc atgccacgga tggtgcgcag tacgcggacc ggttcgggaa
      841 agctcatggc gactcctgtt ggatggatgc ccctgaagat ggacgccaca cggccgtacg
      901 ccaatggacg gctccgcaac cgattgttcc atcgctgatg ttcgctgcac gtcagcattc
      961 ctttcgtacg accaaagtac taccgcagat tcgtcctgtg ccaattgacc gtgtcgaggg
     1021 caagcaggac tctttgtctg tctttccggg agagagcacc tcatgaaagg gttttccaaa
     1081 ctgggctggg cggtactcgc cctgctcggc gcgttctgtc tgggcaccgt ggcgctgcgt
     1141 cgcggcgaac acatcaatgc cctgtggatc gtcgtcgcgg cggtgtcgct gtacctcgtc
     1201 gcctatcgct tctacagcct gttcatcgcc aacaaggtga tgcagctcga tccaacccgg
     1261 gccactccgg cggtgatcaa caacgatggc ctggactacg tgccgaccaa caagcacgtg
     1321 ctgttcggcc accacttcgc cgccatcgcc ggcgccggcc cgctggtcgg cccggtgctg
     1381 gccgcgcaga tgggctacct gcccggcctg ctgtggctgg tggtgggcgt cgtgctggcc
     1441 ggtgcggtgc aggacttcat ggtcctgttc ctgtccagcc gccgcaacgg acgttcgctg
     1501 ggtgacctgg tgcgcgagga gatgggccag gtgcccggca ccatcgccct gttcggcgcc
     1561 ttcctgatca tgatcatcat cctggcggtg ctggcgatgg tggtggtcaa agcgttggcc
     1621 gagagcccct ggggcatgtt cacggtgatc gcaacgatgc ccatcgcgat cctgatgggc
     1681 gtgtacatgc gctacatccg ccccggcaag atcggcgaga tctcgatcgt tggcctgatc
     1741 ctgctgctgg ccgcgatctg gttcggcggc aaggtcgcgg ccgacccgac ctggggcccg
     1801 gcgttcacct tcaccggcac ccagatcacc tggatgctga tcggctatgg ctttgtcgct
     1861 tcggtgctgc cggtgtggct gctgctggca ccgcgtgatt acctgtcgac cttcctcaag
     1921 atcggtacga tcatcgcgct ggccatcggc atcctcgtgg tgatgccgga actgaagatg
     1981 ccggcgctga cccagttcgc cgccagcggt gacggcccgg tgtggaaggg cggcatgttc
     2041 ccgttcctgt tcatcaccat cgcctgcggt gcggtgtccg gcttccatgc cctgatttcc
     2101 tccggcacca cgccgaagct gctggccaat gaagcgcaca tgcgctacat cggctacggc
     2161 ggcatgctga tggaatcgtt cgtggccgtg atggcgctgg tggcggcttc gatcatcgat
     2221 ccgggcatct acttcgcgat gaacagcccg gcggcggtga tcggcccgga tgtggtgtcg
     2281 gccgcgcact acatcaccaa tacctggggc ttcaccatca ccccggaaca gctgaccgcc
     2341 acggcagcag caatcggcga gccgaccatc ctgcaccgcg ccggtggcgc gccaacactg
     2401 gcagtgggca tcgcacagat cctgcaccag gcgattccaa gcagcagcga cgcaatgatg
     2461 gcgttctggt accacttcgc gatcctgttc gaagcgctgt tcatcctgac ggcagtggac
     2521 gccggcaccc gcgcggggcg cttcatgctg caggacctgc tgggcaactt cgtgccagcg
     2581 ttgaaaaaga ccgagtcgtg gaccgccaac atcatcggta ccgccggctg cgtggcgctg
     2641 tggggctatc tgctgtacac cggcgtggtc gatccgttcg gtggcatcca gaccctgtgg
     2701 ccgctgttcg gcatctccaa ccagatgctg gccggcatcg cgctgatgct gggcacggtg
     2761 gtgctgttca agatgaagcg tgaccgctac gcgtgggtca ccgcggtgcc ggcggtgtgg
     2821 ctgctgatct gcaccaccta cgccggcttc atcaagatct tcgacagcaa cccggcgcag
     2881 ggcttcctgg cacaggcgca caagttccag gcggcgcttg ccagcgacac catcaccgcg
     2941 ccggccaagt cggtggcgca gatgaagcag atcgtggtca acgcctacgt caataccggg
     3001 ctgaccgcac tgttcctgct ggtggtgggg gcggtgctgg tgtattcgat caagaccatc
     3061 ctggccgccc gccgcaaccc gcagcgcagc gaccgcgaga ccccgtacgt ggcgctgaag
     3121 ccgcatgaaa tggtggatct gtgatgagca cgcaactggt tcccgccggc cagtaccagg
     3181 cgcaccgccg catctggcgg cgcctggtgc agaccgcacg cctgtgctgt ggcattcctg
     3241 attacgacaa ctacgtccgg cacatgctgg aaaagcatcc ggaccaggag ccgatggact
     3301 acaagacgtt cttccgcgag cggcaggaag cgcgatatgg cggccgcaat ggcggtcgat
     3361 gctgttgaag ttgtgtgtgg gtggcgggct tgcagcccgc cgcccgccga ttcaacttca
     3421 actgcaactg caagagcgtc ggctctgggt ttctgtttg
//
LOCUS       DAOKIP010000308         3455 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.312,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000308 DAOKIP010000000
VERSION     DAOKIP010000308.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 3455)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3455)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3455
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.312"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            <1..1071
                     /locus_tag="QEL58_003826"
     CDS             <1..1071
                     /locus_tag="QEL58_003826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008264661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2345 domain-containing protein"
                     /protein_id="HDS1678252.1"
                     /translation="QTLAEQQVPGLAEYQRTQQLREQIDPKAQGRYTGDVNGQSAMKP
                     GSDGRSPGEQPVERLGTPLLVAEAPHHVAWTTAASAVAYAGQNLQMTVQQDLHVSAGE
                     TLATVSGEHVSLFAQSGPLRVIAAQGPVSLQANDGELELLSEQALTITATDERIDVLA
                     QTKVVLQAGSSAITLEGGNITFSCPGEFKVKAGEHPFMGADTNPAIPEHLPRGTQLVP
                     QQFGLRLVEQFGLQGLAGKPYTLDIGGQRFEGELGSDGSLMHEMPEGAKQAKLKVFPF
                     GADNHPWEWTLDLAAQKQTDEHTGLQSRLKNLGFYDGAVDGDFGQLSRMAMQRFHQAR
                     ELVGLNTPSLPGVTSLGKDHDI"
     gene            1081..2877
                     /locus_tag="QEL58_003827"
     CDS             1081..2877
                     /locus_tag="QEL58_003827"
                     /inference="COORDINATES: protein motif:HMM:NF013625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-binding protein"
                     /protein_id="HDS1678253.1"
                     /translation="MIYGNHNLRRGDHDGTPANNRPPRWGGVDNPPPPTPANAQTPQN
                     QGGATLAIPQHVRQLQQDLRTLGFMFVGTPDGGFGRGTEWAVREFQIYASMANAAQLN
                     QGRLHGWQPQAGLTAPEVMALGLRPNSNPPESYHVASLDRVANGSRYTGPISGVMNAN
                     TRTAMEHWLRNNYRCPVVIEAWQVATGNNQRTTPYTNGVNIWNFDEITQGTVRNASNR
                     VVARVRMFSRDFTGHYTLPNGRRDDQYQSLGSYARFMTYGGPMSEVPNHTWAEAEMTP
                     ERLIGPATTTAILAATPNGAAASTYRVVRATAEQECMGMFDSINAYDDALVSLGPCHW
                     TMGLMPAGGYDNGELPGFLAYFLHRNQADYQRYLGNLGLYPATAWAGVNTGPLWDRTG
                     RKYVGWIRHHDEQTQPAQAATGLAQLPMVDRATLEANYFKTWHWFYRLAMIGRTCANF
                     QQAMWDMVRFRIRDIRSAPITVNVGAVHINGTLGDIYTSEKSVAILLRWHIFRPGHVT
                     GARVRDSLTRAINGHAQLNWSTAPAQWTNAHEQAITAQLLTDALSVNDTQDRLANWPT
                     YAGRNGRNYTLNNELGALRDGRGSFHFDTTGI"
     gene            2880..3446
                     /locus_tag="QEL58_003828"
     CDS             2880..3446
                     /locus_tag="QEL58_003828"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1678254.1"
                     /translation="MSYVLRAAPLLAGLCLATSCAAKQPVADVLDRACAAVSIDDRIE
                     LLPLEGKHVSACPPGDDEGCPYSGQQGKTSLSDTPDLNKDGRKDAILTYFGSSYGDID
                     VTDKLVLAQCKDGTYIRLLEGKFTTLSAPAMPHAVWPELEATRNCPQGHGGAVRTEKI
                     RLTFDSKAAQYRGPAGLNLAAACQAQGD"
BASE COUNT          691 a         1157 c         1073 g          534 t
ORIGIN      
        1 cagaccctgg ccgagcagca ggtgccgggc ctggccgagt accagcgcac ccagcagctg
       61 cgcgagcaga tcgacccgaa ggcacagggc cgctataccg gcgacgtgaa cgggcagagc
      121 gcgatgaagc ccggcagcga cggccgcagc cctggcgagc agccggtgga acggctgggc
      181 acgccgctgc tggtggccga agcgccgcac cacgtggcct ggaccaccgc ggccagcgcc
      241 gtggcctatg ccgggcagaa cctgcagatg accgtgcagc aggacctgca cgtcagcgcc
      301 ggcgagaccc tcgccaccgt gtccggcgag cacgtgtcgc tgttcgcgca gagcggcccg
      361 ctgcgggtga tcgccgcaca ggggccggtc agcctgcagg ccaacgatgg cgagctggaa
      421 ctgctgagcg agcaggcgct gaccatcacc gccaccgacg agcgcatcga cgtgctggcg
      481 cagaccaagg tggtgctgca ggccggcagc agtgcgatca cgctggaggg cggcaacatc
      541 accttcagct gccccggcga gttcaaggtc aaggcgggcg agcatccgtt catgggggcc
      601 gataccaacc ccgccattcc cgagcacctt ccgcgaggca cgcagctggt accgcagcag
      661 ttcgggctgc gcctggtcga gcagttcggg ctgcaaggac tggccggcaa accctacaca
      721 ctggacatcg gcgggcaacg cttcgaaggc gagctgggct ccgatggcag cctgatgcat
      781 gagatgcccg aaggcgcgaa gcaggccaag ctgaaggtgt ttccgttcgg cgccgacaac
      841 cacccctggg aatggacact cgatcttgcc gcacagaagc agacggacga gcacaccggg
      901 ttgcagtcgc gcctgaagaa ccttggattc tacgatggcg cggtcgacgg cgacttcggc
      961 cagctcagcc gcatggccat gcagcgcttc caccaggcac gtgagctggt tgggctcaat
     1021 acacccagcc ttcccggcgt cacctcgctg ggcaaagacc acgacatcta ggacggatgc
     1081 atgatctacg gcaatcacaa cctccgacga ggcgaccacg atggcacgcc tgcgaacaac
     1141 aggccgcctc gctggggtgg cgtcgacaac ccgcccccgc ccacgcctgc gaacgcacag
     1201 acaccgcaga accagggcgg cgcgacgctg gcgatcccgc agcacgtacg ccagctccag
     1261 caggacctgc gtacgctggg cttcatgttc gtcggcacac ctgatggcgg gttcggccgc
     1321 ggcaccgagt gggcggtacg agagttccag atctatgcca gcatggccaa tgccgcccaa
     1381 ctgaaccagg gacggctgca cggctggcaa ccccaggcag gcttgaccgc accggaagtg
     1441 atggcactgg gactgcgccc caattccaat ccaccggaaa gctatcacgt cgcctcgctg
     1501 gaccgggtcg ccaacggatc gcgctacacc ggcccgatca gcggcgtgat gaacgccaat
     1561 acgcgcacag cgatggaaca ctggttgcgc aacaactatc gttgcccggt ggtcatcgag
     1621 gcatggcagg ttgccaccgg caacaaccag cgcactacgc cgtataccaa cggcgtcaac
     1681 atctggaact tcgacgagat cacgcagggc accgtgcgca atgcctccaa ccgggtggtc
     1741 gcgcgcgtcc ggatgttcag cagggacttc accggacact acacgcttcc caacggtcgc
     1801 cgtgatgatc agtaccagtc gctgggcagc tacgcgcggt tcatgaccta tggcggcccg
     1861 atgagcgaag tgcccaacca tacgtgggcc gaagcggaaa tgacgccgga acgcttgatc
     1921 ggtccagcga ccaccacggc aatcctggcc gccacaccca acggcgccgc agcgtccacc
     1981 tatcgcgttg tgcgtgccac ggccgagcag gaatgcatgg gcatgttcga cagcatcaat
     2041 gcctacgatg acgctctggt ctctctcggc ccgtgccatt ggaccatggg cctgatgcct
     2101 gccggcggct atgacaatgg cgagctgcct ggcttcctcg cctacttcct gcatcgcaat
     2161 caagccgact accagcgcta tctcgggaat ctgggtcttt atccggcgac ggcctgggca
     2221 ggcgtcaaca cagggccgct ctgggaccgc acgggccgga agtacgtggg gtggatccgc
     2281 catcacgacg aacagacgca acctgcacag gcagccaccg gtctggcgca gctgcccatg
     2341 gtcgaccggg cgaccctgga agcaaactat ttcaagacct ggcactggtt ctatcgcttg
     2401 gccatgatcg gtcgcacctg cgcgaacttc cagcaggcga tgtgggatat ggtgcgcttc
     2461 cgtatccgcg atatccgttc agcccctatc acggtcaatg tgggtgccgt tcatatcaac
     2521 ggcacgctgg gcgatatcta cacatcggaa aaatccgtcg cgatcctgct tcggtggcat
     2581 atcttccgtc cgggccacgt gaccggtgcc cgggtcaggg attcgttgac ccgtgccatc
     2641 aacggccatg cccagttgaa ctggtcgacg gcaccggcgc aatggaccaa cgcacacgag
     2701 caggcgatca ccgcgcagtt gctcactgac gcactttccg tcaacgacac gcaggatcgc
     2761 ctcgccaact ggccgaccta tgcggggcgc aacggccgca actacaccct caacaatgag
     2821 ttgggcgcct tgcgcgatgg ccgcggctcc ttccatttcg ataccacggg aatatgacca
     2881 tgtcttacgt ccttcgcgcc gcaccgctgc tggccggtct ttgcctggct acctcctgtg
     2941 cggccaagca gcctgtcgcc gacgtcctgg accgcgcctg cgccgcagtg tccattgacg
     3001 atcggatcga actgctgcct ctggaaggaa agcacgtcag cgcctgcccg cccggcgatg
     3061 atgaaggctg cccctacagc ggtcagcagg ggaaaacgtc gttgagcgac acaccggatc
     3121 tgaacaagga tggccggaag gatgccatcc tgacctactt cggcagcagt tacggcgaca
     3181 tcgacgtgac cgacaagctg gtcctggccc aatgcaagga cggaacctac atccgtcttc
     3241 tggaaggaaa gttcacgaca ttgtcggcac ctgccatgcc ccatgccgtg tggcctgaac
     3301 tggaagcgac gcggaattgc ccgcagggcc acggtggtgc agtccgtacc gagaagatcc
     3361 ggctgacctt cgacagcaag gcagcacagt atcgtggacc tgcaggcctg aatctggccg
     3421 cggcctgcca ggctcaaggc gactgaccga agtac
//
LOCUS       DAOKIP010000309         3452 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.313,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000309 DAOKIP010000000
VERSION     DAOKIP010000309.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 3452)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3452)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3452
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.313"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(665..2641)
                     /locus_tag="QEL58_003829"
     CDS             complement(665..2641)
                     /locus_tag="QEL58_003829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014091509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UvrD-helicase domain-containing protein"
                     /protein_id="HDS1678255.1"
                     /translation="MHGLNPPQAAAVLHIEGPLLVLAGAGSGKTRVIVEKIAHLIGCG
                     RYPARRIAAITFTNKSAKEMRERVAKRLREQDADEVTICTFHALGLKFLQIEHAAVGL
                     KRGFSIFDADDAAAQIKDLMYGAKPDDIEDMKNLVSRAKNAGLSPEQAMAAARSNREK
                     EAASVYERYQLRLTAFNAVDFDDLIRLPVQILEENPEIALAWRERIGYLLVDECQDTN
                     DAQYRLLKQLAGDKGNFTCVGDDDQSIYAWRGANPENLQQMGRDYPALEIIKLEQNYR
                     CSNRVLRAANALIANNPHEHLKKLWSDQADGERIRVWECRNSEHEAEKVAAEIAFVAQ
                     SRNVPWSDFCILFRGNFQSRPLEKAMQLLRIPYHLTGGTMFLERQEVKDTLAWLRLLV
                     NPDDDTAFMRAVQSPKRDVGAGTLAKLAELAQEKDMPMAQAAEAIGALQQLPPRAANS
                     LARFTDILRDLRAQTRQVTSGDMIRKVAKESGLLSELRQQAKEEASYQRRANNIEELA
                     QWFEGGPRGATAADLAGQLALLSRSDKDEGGNQVRMMTMHASKGLEFPYVFIVGCEDG
                     VLPHQVSLDEGNLQEERRLLYVGITRAKIQLWMSYSKLTRKFGEHVRLKPSRFFEEIP
                     AEEIQRDGADPVADAARKKERASAGLAAIEALFD"
     gene            2743..3363
                     /locus_tag="QEL58_003830"
     CDS             2743..3363
                     /locus_tag="QEL58_003830"
                     /EC_number="2.7.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010374599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thymidine kinase"
                     /protein_id="HDS1678256.1"
                     /translation="MAKLYFYYSAMNAGKTTTLLQSAHNYRERGMRVAILTPRLDDRA
                     GAGVVASRIGLRADGMAFDRDTDLQRWVEQDLAANGPMGCVLVDEAQFLTRAQVWQLS
                     EVVDQLRIPVLCYGLRTDFRGELFEGSQYLLAWADEMQEIKTICHSGKKATMTVRVDE
                     HGHAVQDGPQVEIGGNDRYVSVSRAEFKKITRGEGRIDPAQAPLPL"
BASE COUNT          530 a         1131 c         1150 g          641 t
ORIGIN      
        1 ctggatccaa acaccctcat tgccctgctg cacagcatcg gctccggcgc tgcttccgat
       61 ggccaaccct ggcgagaacg gcatcagacg cccggccgac gatttgccct ggccgatacc
      121 gactgttcgt tggcgggcct gcgcgtggtg ctggagatcc tgctggccgc ataccgcgca
      181 cgccatcacg cgcctgcagc cggagggctg agtggtgtgg cacccttggg tggcgatggc
      241 gctgtgcctc gccccagtga ttgcagcacc gcgccagtgg tcggtaccgt ccataccctc
      301 gcctctcgcg ttccagagca tctctggcga gcgctattcg cagctgcgtc gccaagtggg
      361 tccagttcgt ggagccacgg ccgaggcagg gcttccagct cgtcgaacga catgcagaag
      421 gcgctttcca gattcactgc agtggcgctc cggtgctgtg gctggatagg cgctcgcagc
      481 atttgctgat gcgggtctca ctggatgaga aacagtgagc gcccaacgtt ctgccgtagt
      541 ctgttgtgat tgatcgggtg cggtgggtac ttgtcagtgg ggcgcgatgt ggcacgcaat
      601 agtcgagcat ggctcgactc taaagagcga atgctgcgct caacgaggag tgttcagacc
      661 ctacttagtc gaacaacgcc tctatcgccg ccaaccccgc actcgcccgc tccttcttgc
      721 gcgccgcatc ggccaccgga tcagcaccat cgcgctggat ctcctcggcc ggaatctctt
      781 cgaagaaccg gctcggcttc agccgcacgt gctcgccgaa cttgcgcgtc agcttgctgt
      841 agctcatcca cagctggatc ttggcgcggg tgatgcccac gtacagcagg cgccgttctt
      901 cctgcaggtt gccctcgtcc aggctgacct ggtgcggcag cacgccgtcc tcgcagccaa
      961 cgatgaacac atacgggaat tccaggccct tggaggcgtg catggtcatc atccgcacct
     1021 ggttgccgcc ctcgtccttg tcactgcgcg acagcagcgc cagctggccg gccaggtcgg
     1081 cggcagtggc accgcgcggg ccgccctcaa accactgcgc cagttcctcg atgttgttgg
     1141 cgcggcgctg gtagctggcc tcttccttgg cctgctggcg cagctcgctg agcaggccgg
     1201 actccttggc gaccttgcgg atcatgtcac cggaggtgac ctgccgggtc tgcgcacgca
     1261 ggtcgcgcag gatgtcggtg aagcgggcca ggctgttggc cgcacgcggc ggcagctgct
     1321 gcagggcacc gatcgcctcg gcggcctgcg ccatcggcat gtccttttcc tgtgccagtt
     1381 cggccagctt ggccagcgtg ccggcgccga cgtcgcgctt gggcgactgc accgcgcgca
     1441 tgaacgcggt gtcgtcgtcc gggttcacca gcaggcgcag ccaggccagc gtgtccttca
     1501 cttcctggcg ctccaggaac atggtgccgc cggtcaggtg gtacgggatg cgcagcagct
     1561 gcatcgcctt ctccaacgga cgcgactgga agttgccgcg gaacaggatg cagaaatcac
     1621 tccacggcac attgcgcgac tgcgccacga aggcgatctc ggccgcgacc ttttcggctt
     1681 cgtgctcgct gttgcggcat tcccacacgc ggatgcgctc gccgtcggcc tggtcgctcc
     1741 acagcttctt caggtgctcg tgcgggttgt tggcgatcag cgcgttggcc gcgcgcagca
     1801 cgcggttgga gcaacggtag ttctgctcca gcttgatgat ctccagcgcg gggtaatcgc
     1861 gccccatctg ctgcaggttt tccgggttgg cgccgcgcca ggcgtagatc gactggtcat
     1921 cgtcacccac gcaggtgaag ttgcccttgt cgccggccag ctgcttgagc aggcggtact
     1981 gcgcgtcgtt ggtgtcctgg cattcgtcca ccagcaggta gccgatgcgc tcgcgccagg
     2041 ccagcgcgat ctccgggttc tcttccagga tctgcaccgg caggcggatc aggtcgtcga
     2101 agtcgaccgc gttgaacgcg gtcaggcgca gctggtagcg ctcgtagacg ctggccgctt
     2161 ccttctcacg gttgctgcgt gcggctgcca tcgcctgctc gggtgacagg ccggcgttct
     2221 tcgcgcgcga caccaggttc ttcatgtcct cgatgtcgtc gggcttggcg ccgtacatca
     2281 ggtccttgat ctgtgccgcc gcatcgtcgg catcgaagat cgagaagccg cgcttcaggc
     2341 ccaccgcagc gtgctcgatc tgcaggaact tcaggcccag cgcatggaag gtacagatcg
     2401 tcacctcgtc ggcgtcctgc tcgcgcaggc gcttggccac gcgctcgcgc atttccttgg
     2461 ccgacttgtt ggtgaaggtg atcgccgcga tgcggcgcgc cggatagcgg ccacagccga
     2521 tcaggtgggc gatcttttcc acgatcacgc gggtcttgcc gctgccggca ccggcgagca
     2581 ccagcaacgg accttcgatg tgcaggacgg cggcggcttg ggggggattg agaccgtgca
     2641 tggggacagg attgtagcgg ggccgggtga cgaccacagc cggccgccgg tggggttgct
     2701 gaacggcttc ggcggactgg ggctgcggcg tacaatccgt cgatggccaa gctctacttc
     2761 tactattcgg cgatgaacgc cggcaagacc accaccctgc tgcagagcgc gcacaactac
     2821 cgcgagcgcg gcatgcgggt ggcgatcctg accccgcgcc tggacgatcg tgccggcgcc
     2881 ggcgtggtcg cttcgcgcat cggcctgcgc gccgatggca tggccttcga ccgcgatacc
     2941 gacctgcagc gctgggtcga gcaggatctg gcggcgaacg ggccgatggg ctgcgtgctg
     3001 gtggacgagg cgcagttcct gacccgcgcc caggtctggc agctcagcga agtggtcgac
     3061 cagctgcgca ttccggtgct ctgctacggc ctgcgcaccg atttccgcgg cgagctgttc
     3121 gaaggcagcc agtacctgct ggcctgggcc gacgagatgc aggagatcaa gaccatctgc
     3181 cacagcggca agaaggccac gatgaccgtg cgcgtggacg agcatggcca cgcggtacag
     3241 gatggcccgc aggtggagat cggcggcaat gaccgctacg tgtcggtcag ccgcgccgaa
     3301 ttcaaaaaga tcacccgcgg tgaagggcgg atcgacccgg cgcaagcgcc gctgccgttg
     3361 taaggggtgt tcggcagggc tgcgccctgc acctgcggta gtgccggccg ctggccggca
     3421 acagcaacag caacagcgaa agctggcatt cc
//
LOCUS       DAOKIP010000310         3424 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.314,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000310 DAOKIP010000000
VERSION     DAOKIP010000310.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 3424)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3424)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3424
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.314"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..152)
                     /locus_tag="QEL58_003831"
     CDS             complement(<1..152)
                     /locus_tag="QEL58_003831"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011260548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1328 domain-containing protein"
                     /protein_id="HDS1678257.1"
                     /translation="MLHYAVIFFVIAIIAAVLGFSGIAGAASNIAWILFVVFLVLAVI
                     SMFRKRG"
     gene            complement(235..1227)
                     /locus_tag="QEL58_003832"
     CDS             complement(235..1227)
                     /locus_tag="QEL58_003832"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008572201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HDS1678258.1"
                     /translation="MKILVTGGGGFLGQALCRGLVERGHQVLAFNRSHYPELQAMGVG
                     QIRGDLADAQAVLHAVAGVDAVFHNGAKAGAWGSYDSYHQANVVGTDNVIAACRAHGI
                     SRLVYTSTPSVTHRATHPVEGLGADEVPYGEDFQAPYAATKAIAEQRVLAANDATLAT
                     VALRPRLIWGPGDQQLVPRLAERARQGRLRLVGDGNNKVDTTYIDNAALAHFLAFEAL
                     APGAACAGKAYFISNGEPLPMRELVNKLLAAVGAPTVDKAISFRTAYRIGAVCERLWP
                     LLRLRGEPPLTRFLAEQLCTPHWYSMEPARRDFGYVPQVSIEEGLRRLKASSAA"
     gene            complement(1224..2882)
                     /locus_tag="QEL58_003833"
     CDS             complement(1224..2882)
                     /locus_tag="QEL58_003833"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005420778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HDS1678259.1"
                     /translation="MNGPCNIAARLPELARERPDQIAIRCPGRRGAGNGMAAYDVTLD
                     YRQLDARSDAMAAGLAGYGIGRGVRTVVMVRPSPEFFLLMFALFKLGAVPVLVDPGID
                     RRALKQCLDEAQPEAFIGIPLAHVARLALRWAPSATRLVTVGRRLGWGGTTLAALERA
                     GANGGPMLAGTDGEDMAAILFTSGSTGVPKGVVYRHRHFVGQIQLLGSAFGMEAGGVD
                     LPTFPPFALFDPALGLTSVIPDMDPTRPAQADPARLHDAIQRFGVTQLFGSPALMRVL
                     ARHGRPLPTVTRVTSAGAPVPPDVVATIRRLLPADAQFWTPYGATECLPVAVVEGREL
                     ERTRAATEAGAGTCVGSVVEPNEVRIIAIDDAPLPDWGQARVLATGEVGEITVAGPTT
                     TDSYFNRPQATAAAKISETLADGSIRIVHRMGDVGYFDAQGRLWFCGRKTQRVETARG
                     PLYTEQVEPVFNTVAGVARSALVGVGAAGAQVPVLCVELQRGQSDSPALQEALRAHAA
                     ARVPEAGLQHFLVHPAFPVDIRHNAKIGREKLAVWASAELEKRA"
     gene            2987..3418
                     /locus_tag="QEL58_003834"
     CDS             2987..3418
                     /locus_tag="QEL58_003834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005407630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YkgJ family cysteine cluster protein"
                     /protein_id="HDS1678260.1"
                     /translation="MQHPCMTCGACCTQYRVAFHWMESDEVTPGGVPHQLTEVLDPHR
                     LCMRGTHSKPVRCVALDAQIGVYSRCTIHPNRPSVCREVDASWEYGKASPQCDKARIA
                     YGLDPLTLADWRWRDEAGNDDGHPDDNGNSPSSPPQAPVAA"
BASE COUNT          534 a         1205 c         1179 g          506 t
ORIGIN      
        1 ccgcgcttgc ggaacatcga gatcactgcc agtaccagga acacaacgaa caggatccag
       61 gcaatgttgc tggcagcacc ggcaatgccg gagaagccga gcacggcggc gatgatggcg
      121 atgacaaaga aaatgacggc gtaatgcagc atggcgctcc tcgcagatgt ccgggccgtt
      181 ggatggcgtg ggtccatcct cccgatctgg cggtgtgcaa ccggtgatgg cgatctatgc
      241 ggcagatgaa gccttcagcc tgcgcagccc ttcttcgatg ctgacctgcg gcacgtagcc
      301 gaaatcgcga cgtgccggct ccatgctgta ccagtgcggc gtacacagct gctcggccag
      361 gaaacgggtc aacggcggtt cgccacgcag gcgcagcaac ggccacagcc gctcgcagac
      421 cgcgccgatg cggtaggcgg tcctgaagct gatcgccttg tccaccgtcg gcgcccccac
      481 ggcggccagc agcttgttga ccagctcgcg catcggcagc ggttcgccgt tggagatgaa
      541 gtacgccttg ccggcgcagg ccgcgcccgg tgccagggct tcgaaggcga ggaagtgcgc
      601 cagcgcggcg ttgtcgatgt aggtggtatc gaccttgttg ttgccgtcgc cgaccaggcg
      661 caggcgaccc tgccgcgcgc gctcggccag gcgaggcacc agctgctggt cgccgggccc
      721 ccagatcagg cgcgggcgca gcgctaccgt cgccagcgtc gcatcgttgg cggccagcac
      781 gcgttgttcg gcaatcgcct tggtcgccgc atacggtgcc tggaaatcct cgccgtacgg
      841 cacctcgtcg gcgccgaggc cttccaccgg gtgggtcgcg cggtgggtca cgctgggcgt
      901 ggaggtgtag accagccggc tgatgccatg cgcgcggcac gcggcgatga cgttgtcagt
      961 gccgaccacg ttggcctggt ggtagctgtc atagctgccc caggcgccag ccttggcgcc
     1021 gttgtggaac accgcatcga cgccagccac cgcatgcagc accgcctgcg catcggccag
     1081 gtcgccacgg atctggccca cgcccatcgc ctgtagttcc gggtagtggc tgcggttgaa
     1141 cgccagcacc tggtggccgc gttcgaccag cccgcgacac agcgcctggc caaggaaacc
     1201 acccccaccg gtgaccagga tcttcatgcg cgcttctcca gttcggcgct ggcccagacg
     1261 gcgagcttct cgcggccgat cttggcgttg tgacggatat cgacggggaa ggccggatgc
     1321 accaggaagt gctgcaggcc ggcctcaggc acgcgggctg ctgcgtgagc gcgcagtgct
     1381 tcctgcagtg ccgggctgtc ggactggcca cgctgcagtt ccacgcacag caccggcacc
     1441 tgcgcacctg cggcgccaac accgaccagc gcgctgcgcg ccacgccggc gacggtgttg
     1501 aacaccggct cgacctgctc ggtgtacagc ggcccgcgtg cggtttccac gcgctgcgtc
     1561 ttgcgcccgc agaaccacag gcggccctgt gcatcgaagt accccacgtc gcccatgcgg
     1621 tgcacgatac ggatgctgcc atcggccagg gtttcgctga tcttcgctgc cgcggtcgcc
     1681 tgcgggcggt tgaaatagct gtcggtggtg gtcggcccgg ccacggtgat ctcgcccacc
     1741 tcgccggtgg ccagcacgcg tgcctgcccc cagtccggca gcggggcatc atcgatggcg
     1801 atgatgcgca cctcgttcgg ctccaccacg ctgcccacgc aggtgccggc gccggcctcg
     1861 gtggcggcgc gggtgcgctc cagctcgcgg ccttcgacca cggccaccgg caggcactcg
     1921 gtggcgccat acggggtcca gaactgcgca tcggccggca gcaggcggcg gatggtggcg
     1981 accacgtccg gcggcaccgg cgcaccggcc gaggtcaccc gggtcacggt cggcagcggc
     2041 cggccatgcc tggccagcac gcgcatgagg gccggcgaac cgaacagctg ggtcacgccg
     2101 aagcgctgga tggcgtcgtg cagtcgcgcc ggatcggcct gtgccggccg cgtcgggtcc
     2161 atgtccggga tcaccgaggt caggccaagc gccggatcga acagcgcgaa cggcgggaag
     2221 gtcggcaggt ccaccccacc cgcttccatg ccgaacgcgc tgcccagcag ctggatctgg
     2281 ccgacgaagt ggcggtgacg gtagaccacg cccttgggca cgccggtgga gccgctggtg
     2341 aacaggatgg cggccatgtc ctcgccatcg gtgccggcca gcatcggccc accgttggcg
     2401 cctgcgcgct cgagcgcggc cagagtggtt ccaccccagc cgaggcggcg gccgacagtg
     2461 accagacggg tcgccgaagg cgcccaacgc agcgccagcc gcgccacatg cgccagcggg
     2521 atgccgatga aggcctccgg ctgcgcctcg tccaggcatt gcttcagcgc acgcctgtcg
     2581 atgccggggt cgaccagcac cggcaccgcg cccagcttga acagcgcgaa catcaacagg
     2641 aagaactccg gcgacggccg caccatcacc accgtgcgca cgccgcggcc gatgccgtag
     2701 ccggccaggc cggccgccat ggcatcgctg cgcgcgtcca gctggcggta gtccagggtc
     2761 acgtcatagg ccgccatgcc attgccggca ccgcggcggc cggggcagcg gatggcgatc
     2821 tggtcggggc gttcgcgagc cagttcaggc aggcgggccg caatgttgca gggtccgttc
     2881 atccgttcat tgtcgccgct tacggaattt cttgcgcggc ggcccacttc gtggaaaatc
     2941 cgcaccctcg ttcctgattc cgactgccgc ccgaggcggc ttgcccatgc aacatccctg
     3001 catgacctgc ggcgcctgct gcacccaata ccgcgtggcc ttccactgga tggaatcgga
     3061 cgaggtcact cccggcggcg tgccgcacca gctcaccgag gtgctcgacc cgcaccgcct
     3121 gtgcatgcgc ggcacgcact ccaagccggt gcgctgcgtg gcgctggatg cgcagatcgg
     3181 cgtgtattca cgctgcacca tccaccccaa ccggcccagc gtgtgccgcg aggtggatgc
     3241 gtcgtgggag tacggcaagg ccagcccgca gtgcgacaag gcgcgcatcg cctatggcct
     3301 ggacccgttg acgctggccg actggcgctg gcgcgacgag gccgggaacg atgacggcca
     3361 tccggacgac aacggcaaca gcccgtcctc gccaccgcag gcgccggtcg cggcgtagtg
     3421 gtag
//
LOCUS       DAOKIP010000311         3407 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.315,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000311 DAOKIP010000000
VERSION     DAOKIP010000311.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 3407)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3407)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3407
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.315"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(42..1406)
                     /locus_tag="QEL58_003835"
     CDS             complement(42..1406)
                     /locus_tag="QEL58_003835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HDS1678261.1"
                     /translation="MNPPASPAAPVAQPLWRTYLTLLLPMLLTNALQLAAGTLDNIYL
                     GHLLGTQAVAAAAAFFPAFFLLLALVMGLATGAMVLIGQAWGAGRPHQARAVAGSAVA
                     LVLSLSVLAMAVGGLFAPQLLAALGTPAPILDEAIAYARVLLLGAPAFFLLWLATAVS
                     RAVGDAKTPLHALLLATGVGLLCTPLLILGWAGLPRLGAASAAVSAVFASLLGLVWLL
                     WRWHRLAHPLAPGHDLLRAIRFDRGLIRSMLRIGLPSSLQMFSLAIAEIVLLGWINRY
                     GYTATAAYGAVNQLMSWVQLPAMSLGITATILAAHAMGAGRAARLPAIARTGVLLGLA
                     LLAAVVMLVMALAPWLSGLILAAPEVRELAALQLRTVVWGVLAMGVTAVLVGVMRGSG
                     TVLLPALLGMSAVLLVELPLAMWLQARHGLAGLWWAWPLGLLAMLVMQVFCFARWRRR
                     VQGG"
     gene            complement(1527..2156)
                     /locus_tag="QEL58_003836"
     CDS             complement(1527..2156)
                     /locus_tag="QEL58_003836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019338198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2239 family protein"
                     /protein_id="HDS1678262.1"
                     /translation="MPASRLPPFSCFDGHRLVASGTPEVAALALKQLRADNAAGPLLV
                     FDNATGRTRDFDTRGTDAQLLARVAEAFPPAVEADPETPFDDTPAIPRGRGRPKLGVV
                     AREVTLLPRHWAWLAEQPGGASVVLRRLVESASRAGADRDRQRRDSERAYHFLQTIGG
                     DLPGFEDAIRLLFAHDRAGFRTALHAWPDDVRTHALRLAFDDPASTADG"
     gene            complement(2319..2807)
                     /locus_tag="QEL58_003837"
     CDS             complement(2319..2807)
                     /locus_tag="QEL58_003837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012444982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="8-oxo-dGTP diphosphatase"
                     /protein_id="HDS1678263.1"
                     /translation="MPYTPIVATLGYVLSPDRRQVLMIHRNTRPGDHHLGKYNGLGGK
                     IEADEDVAASMRREIQEEAGIDCTGMRLRGTISWPGFGKHGEDWLGFVFVIDGFEGTP
                     HGGNHEGTLEWVDLDKLDTLPMWEGDRNFLPLVFDADPRPFHGVMPYKDGRMVSWSFS
                     RL"
     gene            complement(2850..3359)
                     /locus_tag="QEL58_003838"
     CDS             complement(2850..3359)
                     /locus_tag="QEL58_003838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1249 domain-containing protein"
                     /protein_id="HDS1678264.1"
                     /translation="MAHASPRTERIPRLSRLSWLMGLYAENYRHLVRLFAPAELVAGS
                     YISSVGDGLDVRLDVIECHRYTVELRLTYDLADPVTGEPDPSAYVRLYRDARQAETTH
                     CYVGRRWQDTMGLYPPPAELISHRMRMNTFLGKWLEYLAERGHGVATLRRDSDGIRTP
                     TERRLSLVR"
BASE COUNT          617 a         1196 c         1135 g          459 t
ORIGIN      
        1 atcagctcag ggcgattgcg gttgccggcc agcggtcggt attacccgcc ttgcacccgt
       61 cgccgccaac gcgcgaaaca gaacacctgc atcaccagca tcgccagcaa tcccagcggc
      121 cacgcccacc acagcccggc cagcccatgc cgcgcctgca gccacatcgc cagcggcagt
      181 tccaccagca acaccgccga catgcccagc aacgctggca gcaaaaccgt gccgctgccc
      241 cgcatcaccc cgaccagcac cgcggtgaca cccattgcca gcacgcccca gaccaccgta
      301 cgcagctgca gcgcggccag ttcgcgcacc tccggcgccg ccaggatcag gccgctcagc
      361 cagggcgcca atgccatcac cagcatcacc accgccgcca gcaacgccag ccccagcagc
      421 acgccggtgc gggcgatggc cggcaaccgc gccgcacgcc ccgcgcccat cgcgtgggcc
      481 gcaaggatgg tggcggtgat gcccagcgac atggctggca actgcaccca gctcatcaac
      541 tggttgaccg caccgtaggc cgccgtggcc gtgtagccgt agcggttgat ccagcccagc
      601 aacacgatct cggcaatggc caggctgaac atctgcagcg aggacggtag gccgatgcgc
      661 agcatcgagc ggatcagccc ccgatcgaaa cggatggcgc gcagcagatc atggcccggc
      721 gccaacgggt gtgccagacg atgccagcgc cacagcaacc agaccaggcc cagcagcgaa
      781 gcgaacaccg ccgataccgc cgcactggcc gcacccagcc gcggcaggcc ggcccagccc
      841 aggatcagca gtggcgtgca caacaggccc acccctgtgg ccagcagcag cgcgtgcaat
      901 ggcgtcttcg catcgcccac cgcgcggctt acggcggtcg ccagccacag caggaagaag
      961 gccggcgccc ccagcaacaa cacgcgcgca taggcgatgg cctcgtccag gatcggtgcc
     1021 ggcgtaccca gtgctgccag cagctgcggc gcgaagaggc cgcccaccgc catcgccagc
     1081 accgacagcg acagcaccag cgccaccgcg ctgcctgcca ccgctcgcgc ctggtgtggc
     1141 cgaccggcgc cccaggcttg gccgatcagc accatcgcac cggtcgccag gcccatcacc
     1201 agcgccagca gcaggaaaaa agccgggaag aatgcggcgg cggcggccac ggcctgcgtg
     1261 ccaagcaggt gccccagata gatgttgtcc agtgtgcctg cggccaactg cagcgcattg
     1321 gtcagcagca tcggaagcag cagggtcaga taggtgcgcc acagcggctg cgcaaccggc
     1381 gcagcaggag atgcaggagg gttcatcgga gtctctgggc aaagcggcgc cctgcccggc
     1441 gtttcagcca gcaaagagcg cgcacgaagg gaacgggccg tggcccgcga tcaggtgaag
     1501 cgctcgctca gtgagcgcgg ggtgtttcag ccgtcggcag tgctggcagg gtcatcgaac
     1561 gccaggcgca gggcatgcgt gcgcacgtcg tcgggccacg catgcaatgc cgttctaaaa
     1621 cccgctcggt catgcgcgaa caggaggcgg atggcgtcct cgaagcccgg caggtcgccg
     1681 ccgatggtct gcaggaagtg ataggcacgc tcgctgtccc ggcgctgccg atccctgtcc
     1741 gcgccggcac ggctggccga ttccaccagc ctgcgcagca ccaccgaggc cccgcccggc
     1801 tgttcggcca gccacgccca atggcgcggc agcagtgtca cttcgcgggc aaccacgccc
     1861 agcttgggtc gaccgcggcc gcgtgggatt gcaggtgtat cgtcgaacgg ggtttccgga
     1921 tccgcttcca cggccggcgg gaacgcctcg gccacccgcg ccagcagctg cgcatccgtg
     1981 ccgcgcgtat cgaaatcgcg ggtgcggccg gtggcgttgt cgaacaccag cagcggaccg
     2041 gcggcgttgt cggcgcgcag ctgtttcagc gccaacgcgg cgacttccgg ggtaccggac
     2101 gccaccaggc gatggccgtc gaaacagctg aacggaggaa gtcgggacgc aggcatggca
     2161 agggcaccgg aggcgatgcg caaatattgc ccgggtaatt tgtgactgtc aatattgtcc
     2221 gggtattaat tggccggaag agcgtgccaa ccaaggttgg cacccaccag aagggttggc
     2281 acccacccga aaggttggca cccacccgat tcgccgggtc acagccggct gaaggaccag
     2341 ctcaccatgc ggccgtcctt gtacggcatc acgccgtgga acgggcgcgg gtcggcatcg
     2401 aacaccagcg gcaggaagtt gcggtcgccc tcccacatcg gcagcgtgtc cagcttgtct
     2461 aggtccaccc actccagcgt gccttcgtgg ttgccaccgt gcggggtgcc ttcgaagcca
     2521 tcgatgacga acacgaagcc gagccagtcc tcgccatgct tgccgaagcc gggccagctg
     2581 atggtgccgc gcaggcgcat gccagtgcag tcgatgccgg cctcctcctg gatctcgcgg
     2641 cgcatgctgg cagccacgtc ctcgtccgct tcgatcttgc cgcccagccc gttgtacttg
     2701 cccaggtggt ggtctcccgg gcgggtattg cggtggatca tcagcacctg gcgacgatca
     2761 ggcgaaagca cgtagcccag ggtggcgacg atcggggtgt acggcatggg gcagcatcca
     2821 gcggcaggtc agctccggat tatggccgat cagcgcacca gcgacaggcg gcgctcggtc
     2881 ggcgtgcgga tgccgtcgga atcgcgacgc agggtggcga cgccgtggcc gcgctcggcc
     2941 aggtattcca gccacttgcc gaggaaggtg ttcatccgca tgcgatggct gatcagctct
     3001 gccggcggcg gatacaggcc catcgtgtcc tgccagcggc ggccgacgta gcagtgggtg
     3061 gtctcggcct ggcgcgcgtc gcggtacagg cgcacatagg ccgacggatc gggctcgccg
     3121 gtgaccgggt cggccaggtc gtaggtcagg cgcagttcca ccgtgtagcg gtggcattcg
     3181 atcacgtcca ggcgcacgtc caggccatca cccaccgaag agatgtagct gcccgcaacc
     3241 agctcggccg gcgcgaacag gcgcaccagg tggcggtagt tttccgcgta caggcccatg
     3301 agccagctca gccggctcag gcggggaatg cgttcggtgc ggggcgaggc gtgggccatg
     3361 ggtcgatcct acacgttggt gcttcaacgt gggggcgcac acgtgca
//
LOCUS       DAOKIP010000312         3401 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.316,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000312 DAOKIP010000000
VERSION     DAOKIP010000312.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 3401)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3401)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3401
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.316"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(42..755)
                     /locus_tag="QEL58_003839"
     CDS             complement(42..755)
                     /locus_tag="QEL58_003839"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1678265.1"
                     /translation="MLQAGLLLPPVAAQVPFHALHVLSYAIAQGTGASGWLHDPAWRC
                     AADVVASHIRSGNLPTGLQVDCHGSVEACVQHLRAHGIALDPALLFDNHAQCAWYSPR
                     YRAGPGMRALYPDGDLDDLSIRLFQVDAEEPPFVVAGEGTVPPRVPGEHEDREDFPPF
                     GNYADFIGAAYEDINVQWSPPGTDARYRILDLDWYAGLGIGWHFIQFEGGTGDDMVAF
                     IQAISDQCGQRMQVAHRHL"
     gene            832..1212
                     /locus_tag="QEL58_003840"
     CDS             832..1212
                     /locus_tag="QEL58_003840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1678266.1"
                     /translation="MDNRNGSRDLEVFAARTACVNDAGHRKRRYLTGHCRNAHRWWIT
                     TQCAGLANQQPGQQSRTRTHWLMSPPPLKVAWSIVDEPPSVPIRRTRTNSTTCCCAWP
                     LCLAINGRRCAVTVERLVAGPTVH"
     gene            complement(1294..1929)
                     /locus_tag="QEL58_003841"
     CDS             complement(1294..1929)
                     /locus_tag="QEL58_003841"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012478802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysE family translocator"
                     /protein_id="HDS1678267.1"
                     /translation="MPATSDLLAFALISLGMVLTPGPNMIYLVSRSICQGRRAGLISL
                     GGVALGFVFYMLCAALGITALLMTVPLAYDALRIGGALYLLYLAWQALKPGGRSPFAV
                     RDLPPDGPRRLFAMGFLTNLLNPKIAVMYLSLLPQFLHPEGHGSVLVQSLVLGFTQIA
                     VSVSVNAVIAVMAGSIAGFLAARPTWQAVQRWLMGTVLAGLAVRMAVEGRR"
     gene            2020..2421
                     /locus_tag="QEL58_003842"
     CDS             2020..2421
                     /locus_tag="QEL58_003842"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010487034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HDS1678268.1"
                     /translation="MTPIPETVPPIEVRMAEIVFPNHTNHLGTLFGGQALAWMDKAAF
                     LAAARYSRRTVVTARSDQVDFKLPIRIGQMVETIGRIVEVGRSSMKVEVELVAEDLHS
                     GERKLCTRGHFVMIALDEEGHPIAVPPLPVA"
     gene            2478..3293
                     /locus_tag="QEL58_003843"
     CDS             2478..3293
                     /locus_tag="QEL58_003843"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005407673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent protein deacetylase"
                     /protein_id="HDS1678269.1"
                     /translation="MTPPLTDFIDRAQRLFVLTGAGCSTASGIPDYRDSDGQWKRTPP
                     VTYQAFMGEAATRQRYWARSLLGWPRFGLARPNGTHQALAALESRGKLQVLLTQNVDG
                     LHQRAGSQNVIDLHGRLDLVRCMGCERRSAREEFQQRLREANPGWDALEAGIAPDGDA
                     DLETDFSAFVVPECPHCGGLLKPDVVFFGENVPRERVAAVHEHLQQADAVLVVGSSLM
                     VYSGFRFVQAAARAGLPVAALNRGRTRADDLLQFKDERDCAEALAAVIELPPG"
BASE COUNT          590 a         1183 c         1142 g          486 t
ORIGIN      
        1 gacacgaact tctgatcgcg caacgtcatg cgtcgaaaca ctcacaagtg gcggtgcgcc
       61 acctgcatgc gctggccgca ctggtcactg atggcctgga tgaaagccac catgtcgtcg
      121 cccgtgccgc cttcgaactg gatgaaatgc cagccgatac ccaggcctgc gtaccagtcc
      181 agatccagga tgcggtaacg cgcatcggtg ccgggtgggc tccactgtac gttgatgtcc
      241 tcgtaggctg cgccgatgaa atcggcatag tttccaaatg gggggaagtc ttcgcggtcc
      301 tcatgttcgc ccggcacacg cggcggcacc gtcccttccc ccgccaccac gaacggcggc
      361 tcctcagcgt ccacctggaa caggcggatg ctcaggtcgt caaggtcgcc gtcggggtag
      421 agcgcgcgca tgcccgggcc ggcccggtaa cgcgggctgt accacgcgca ctgcgcgtga
      481 ttgtcgaaca gcagcgcggg gtccagcgca atgccgtgcg cgcgcaggtg ctgcacgcac
      541 gcctccacgc ttccgtggca atccacctgc aaaccggtcg gcagattccc cgagcggatg
      601 tggctggcca ccacgtcagc cgcgcaccgc cacgccgggt cgtgtagcca gccgctggca
      661 ccggtacctt gggcaatggc atagctcaac acgtgcaggg cgtggaacgg cacctgggct
      721 gctacgggtg gaagcaggag gcctgcctgc agcatccact tttccagcgc ctgcaggtct
      781 ggccccggca ggtgtggtgc tgcaggaaag acaaaacaat cgtgttcgga catggacaac
      841 cgcaatggca gcagggacct ggaagtgttc gcggcgcgca cggcatgcgt caacgacgcc
      901 ggtcacagga agcggcgcta cctgacgggg cattgccgca atgcgcatcg atggtggatt
      961 acgacgcaat gcgccggcct ggcgaaccag cagccgggac agcaatcccg tacaaggacc
     1021 cactggctga tgagtccgcc accgttaaag gtggcctggt ccatagtgga cgaaccacca
     1081 tcagtaccga tccgacgaac gcgcacgaac tcaaccacct gctgctgcgc ctggccgctg
     1141 tgcctggcca tcaacggccg ccgctgcgcg gtaaccgtgg aacgactggt cgccggaccg
     1201 accgtgcact gagggtagcg ccgggccacg cccggcggaa tccatccgcc gcgctgcgtg
     1261 ctcgccgggc gcggcccggc gcaaccagat gtcttaccgc cgcccttcca ccgccatacg
     1321 caccgccagc cccgccagca ccgtgcccat cagccagcgc tgcaccgcct gccaggtcgg
     1381 gcgcgcggcc aggaagccgg cgatgctgcc ggccatcacc gcgatcaccg cgttgacgct
     1441 gacgctgacc gcaatctggg tgaagcccag caccagcgac tgcaccagca cgctgccgtg
     1501 gccttccggg tgcaggaact gcggcagcag ggacaggtac atcaccgcga tcttcgggtt
     1561 cagcaggttg gtcagaaagc ccatcgcgaa cagcctgcgt gggccgtctg gcggcaggtc
     1621 gcgcaccgcg aacggcgagc ggccgcccgg cttgagcgcc tgccaggcca ggtacagcag
     1681 gtacagcgca ccaccgatgc gcagcgcgtc ataggccagt ggcacggtca tcagcagggc
     1741 ggtgatgccc agcgccgcgc acagcatgta gaacacgaag cccagcgcca ccccgcccag
     1801 cgagatcagg ccggcgcggc ggccctggca gatcgagcgc gaaaccaggt agatcatgtt
     1861 cggcccgggc gtgagcacca tgcccagcga gatgagggcg aaggccagca gatcggaggt
     1921 cgcaggcatg ggcggtcctg gcagggggcg tggcgcagtg tagcgccgcc tgcacggggc
     1981 ctggcttaaa atcgcggcac cccacagcga agcaccgcca tgaccccgat ccccgagacc
     2041 gtgccgccca tcgaagtgcg catggccgaa atcgtcttcc ccaaccacac caaccatctg
     2101 ggcaccctgt tcggtggcca ggcgctggcg tggatggaca aggccgcctt cctggccgcc
     2161 gcccgctact cgcgccgcac cgtggtgacc gcgcgcagcg accaggtcga tttcaagctg
     2221 ccgatccgca tcggccagat ggtggagacc atcggccgca tcgtcgaagt cggccgcagc
     2281 tcgatgaagg tcgaggtcga actggtggcc gaagacctgc acagcggcga gcgcaagctg
     2341 tgcacgcgcg gccacttcgt gatgatcgcg ctggacgagg aaggccaccc gatcgcggtg
     2401 ccgccgctgc cggtggcctg agcctgccgg ctgaaccggc gcttgcgggg gcgcgtgcgc
     2461 gcccccatct ggcagccatg accccgccgc tgaccgactt catcgaccgc gcccagcgcc
     2521 tgttcgtgct gaccggcgcc ggttgcagca ccgcctcggg cattcccgat taccgcgata
     2581 gcgacggcca gtggaagcgc acgccgccgg tgacctacca ggccttcatg ggcgaggcgg
     2641 ccacccgcca gcgctactgg gcgcgcagcc tgctgggctg gccgcgcttc ggcctggccc
     2701 ggcccaatgg cacccaccag gcactggccg cgctggaaag ccgcggcaag ctgcaggtgc
     2761 tgctgaccca gaacgtggat ggcctgcacc agcgcgccgg cagccagaac gtgatcgacc
     2821 tgcacggacg gctggatctg gtgcgctgca tgggctgcga gcgccgcagc gcccgcgagg
     2881 agttccagca gcgcctgcgc gaggccaacc ccggctggga tgcgctggag gccggcatcg
     2941 cacccgatgg cgacgccgac ctggaaacgg atttctccgc gttcgtggtg ccggagtgcc
     3001 cgcactgtgg cggccttctg aagccggacg tggtgttctt cggcgaaaac gtgccgcgcg
     3061 agcgcgtggc cgccgtgcac gagcacctgc agcaggccga tgcggtgctg gtggtcggct
     3121 cgtcgctgat ggtctattcc ggcttccgct tcgtgcaggc tgcggccagg gcggggttgc
     3181 cggtggcggc gctgaaccgt ggccgcaccc gcgccgacga cctgctgcag ttcaaggacg
     3241 agcgcgattg cgccgaggcg ctggcggccg ttatcgaact accgcctggg tagagtcgac
     3301 tgtcgcgcgc agcgcgggcc tttcgatggc gattggaaag gcagtcgact gacagtcgac
     3361 tctaccgacc cccgccaccg cgaaacagcg atccatccag a
//
LOCUS       DAOKIP010000313         3387 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.317,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000313 DAOKIP010000000
VERSION     DAOKIP010000313.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 3387)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3387)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3387
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.317"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            110..1471
                     /gene="mgtE"
                     /locus_tag="QEL58_003844"
     CDS             110..1471
                     /gene="mgtE"
                     /locus_tag="QEL58_003844"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium transporter"
                     /protein_id="HDS1678270.1"
                     /translation="MAEAVRHDKTARQLRMLSDALDSGRLGPVRRLVNTLAPAEIGNL
                     LESLPPGKREVVWGLVDPEDDGEVLVHVGEDVRESLLADMDPDEIIAAVEDLDIDDLA
                     DLVEDLPDTVIDEVLKSMDRENRERLEQVLSYPEDSAGRLMNPDVVTVRADVNVDVVL
                     RYLRLRGELPDHTDHLFVVSRRHQYLGRVSLAALVTHEDTTPINRLIDDEQPAIDVGE
                     SDQEVARQFSDHDWISAPVVDDNNILIGRITIDDVVDIIRGQAEHQALGAAGLDEDED
                     LFSPVWRAMRRRLMWLSVNLCTAFLASSVVGHFEGTIDKLVALAVLMPIVAGLGGNAG
                     TQVLALMVRGLALGQVGASNARTLLWKEVRVALLNGVMLGSVLGLIVLAWFHSPGLSA
                     VIAIALTCNLLFAALAGVLVPLTLKRFGFDPALASGIFLTAVTDSMGFFTFLGLATLV
                     LLH"
     gene            1532..1798
                     /locus_tag="QEL58_003845"
     CDS             1532..1798
                     /locus_tag="QEL58_003845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005408382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1678271.1"
                     /translation="MATTIENYFQPGWRDQQHTCPACEWKGSSRGMEMELDEDATEYD
                     CPVCENPLLVVLHPDMAQVQAAAAEGNAEAQEQLDIIASFPRPQ"
     gene            1869..2666
                     /locus_tag="QEL58_003846"
     CDS             1869..2666
                     /locus_tag="QEL58_003846"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008267468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HDS1678272.1"
                     /translation="MVRSMSRWLPLLALLMMTGCASLPDSARGRFEARAVKVDGGTAY
                     YQVFIPAGLKAPASASVPVILFLHGSGERGSDGIRQTHAGLGPYLREHPDFPALVVFP
                     QAAKHSEWSGHNNRMALAALDATIAEFGADPSRQYLTGMSMGGYGSWNIALDDPRRFA
                     AIVPVCGAVLAPRAKRPTLFVEQVAHESDPYAVIAQRLQHAPIWIFHGALDDVVPPDD
                     DRRLHSAFQSANARDVRYTEYPEGNHNAWDATYADPAMWAWLFAQKR"
     gene            complement(2820..3311)
                     /locus_tag="QEL58_003847"
     CDS             complement(2820..3311)
                     /locus_tag="QEL58_003847"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HDS1678273.1"
                     /translation="MNRARLRLGRHSLIGQTYLLTTVTQGRRRDFEDAAAAHVVMDLV
                     RRIDAEGLTHSLAYVVMPDHIHWLVELRAFSLDYIMQRFKSSSALRINRMLGRSGRFW
                     QSSYHDHAIRSDESLFRHAMYVVGNPIRAGLATQLGEYPHAWCRWGMDGKFEAIELSG
                     SER"
BASE COUNT          579 a         1114 c         1116 g          578 t
ORIGIN      
        1 ccccagcggc tatgcgttga aacatcccct tgcgataatg acgcgctgaa cacccctgtt
       61 gccgcatcct tgccgggatc gcggcttttc ttatcccgcg ggagctgcga tggctgaagc
      121 tgtacgccac gacaagactg cgcgccaact gcggatgctg tccgatgcac tggacagcgg
      181 ccggctgggg ccggtgcgtc ggctggtcaa caccctggcc ccggccgaga tcggcaacct
      241 gctcgaatcg ctgccgccgg gcaagcgcga ggtggtgtgg ggcctggtcg atccggaaga
      301 tgacggcgag gtgctggtcc acgtcggcga ggacgtgcgc gaaagcctgc tcgcggacat
      361 ggacccggac gagatcatcg ccgcggtcga agacctggac atcgacgacc tggccgacct
      421 ggtcgaagac ctgccggaca cggtcatcga cgaagtcctc aagtcgatgg accgcgagaa
      481 ccgcgagcgc ctggaacagg tgctgtccta ccccgaggac agcgccggcc gcctgatgaa
      541 tccggacgtg gtgaccgtgc gcgccgacgt caacgtcgat gtggtgctgc gctacctgcg
      601 cctgcgcggc gaactgcccg accacaccga ccacctgttc gtggtcagcc ggcggcacca
      661 gtacctcggg cgggtctcgc tggccgcgct ggtgacccac gaggacacca ccccgatcaa
      721 ccgcctgatc gacgacgagc agccggccat cgacgtcggc gagagcgacc aggaagtggc
      781 acggcagttc tccgaccatg actggatctc cgcgccagtg gtggacgaca acaacatcct
      841 gatcggccgc atcaccatcg atgacgtggt cgacatcatc cgcggccagg ccgagcacca
      901 ggcgctgggc gccgccggcc tggacgagga cgaggatctg ttcagcccgg tctggcgcgc
      961 catgcgccgg cgcctgatgt ggctgtcggt gaacctgtgc accgcgttcc tggcctccag
     1021 cgtggtcggc cacttcgaag gcaccatcga caagctggtg gcgttggcgg tgctgatgcc
     1081 gatcgtggcc ggcctgggtg gcaatgccgg cacccaggtg ctggcgctga tggtgcgcgg
     1141 cctggcgctg ggccaggtgg gcgcgtccaa tgcgcgcacg ctgctgtgga aggaagtgcg
     1201 ggtcgccctg ttgaacggcg tgatgctggg ttcggtgctg gggctgatcg tgctggcctg
     1261 gttccactcg cccggcctgt cggcagtgat cgcgatcgcg ctgacctgca acctgctgtt
     1321 cgccgcgctg gccggcgtgc tggtgccact gacgctcaaa cgcttcggct tcgacccggc
     1381 gctggccagc ggcatcttcc tgaccgcagt aaccgactcg atgggcttct tcaccttcct
     1441 cggcctggcc accctggtgc tgctgcactg aaccctgcag ggtcggatcc ccgccacgcg
     1501 gggctctgac ccgatcccaa ctggaacacc catggcaaca acgatcgaaa actacttcca
     1561 gcccggctgg cgcgaccagc agcacacctg cccggcctgc gaatggaagg gcagctcgcg
     1621 cggcatggag atggaactgg acgaggacgc aaccgagtac gactgcccgg tctgcgagaa
     1681 cccgttgctg gtggtactgc acccggacat ggcgcaggtg caggccgccg ccgccgaagg
     1741 caatgccgaa gcacaggaac agctggacat catcgccagt ttcccgcgcc cgcagtgacg
     1801 cggcgcatga tgccgcgttg acgacggcgg actacgatgg aggcgttccc gccgccccag
     1861 gaattcccat ggtccgttcc atgtcgcgct ggctgccgct gctggccctg ctgatgatga
     1921 ccggttgtgc ctcgctgccg gacagcgcac gtggtcgctt cgaagcccgc gcagtcaaag
     1981 tggacggcgg gaccgcctac taccaggtgt tcattccggc cgggctgaag gccccggcgt
     2041 ccgccagtgt tccggtcatc ctgttcctgc atggctcggg cgagcgcggc agtgacggca
     2101 tcaggcagac ccacgcgggg ctgggccctt atctgcgcga gcatcccgac ttcccggccc
     2161 tggttgtctt cccgcaggca gcaaagcact cggaatggag cggccacaac aaccgcatgg
     2221 ccctggccgc gctggacgca acgatcgccg agtttggcgc cgatccttcg cgccagtacc
     2281 tgaccggcat gtcgatgggc ggctacggca gctggaacat cgccctggac gacccacgcc
     2341 gctttgccgc gatcgtgccg gtatgcggcg ccgtgctggc accgcgcgcg aagcgaccga
     2401 ccctgttcgt cgagcaggtc gcgcatgagt ccgatcctta cgcggtgatc gcccagcgcc
     2461 tgcagcacgc accgatctgg atcttccacg gcgcactgga tgatgtggtg ccaccggacg
     2521 acgaccgcag gctgcacagt gccttccaga gcgccaacgc gcgcgacgtg cgctacaccg
     2581 agtacccgga aggcaaccac aacgcctggg acgccaccta cgccgatccg gcgatgtggg
     2641 cgtggctgtt cgcgcagaag cgctgaacca ccgctcctgc cgggaaacat ctgttggtgg
     2701 gtgtcgaccg ttggtcgaca tgggagctgg tgggtgccga ccgttggtcg gcatgggagc
     2761 tggtaggtgc cgaccgttgg tcggcatggg agctggtggg tgccgaccgt tggtcgacac
     2821 tatctctccg atccagaaag ctcgattgcc tcgaacttcc catccatccc ccatctacac
     2881 cacgcatggg gatactcacc aagctgcgtt gccaatcctg ccctgatcgg attccccacc
     2941 acgtacatcg catggcggaa cagcgattca tcagagcgga tcgcgtgatc gtgatagctc
     3001 gattgccaga atcttcctga ccggccgagc atgcgattga tccgcaatgc actgctcgat
     3061 ttgaagcgtt gcatgatgta gtccagtgag aacgcgcgga gctccacaag ccaatggatg
     3121 tggtctggca tgaccacata ggcaagcgag tgcgtcagac cttcagcgtc gatgcgacgg
     3181 accaagtcca tcaccacgtg tgccgcggcg gcatcctcga agtcgcgtcg acgtccctgg
     3241 gtgacggtgg tcagaaggta ggtttgtccg atcagggaat ggcggccaag tctcaggcgt
     3301 gctcggttca tgggcacaag cgtgtgcgcg acagctgctg ttgcctatcg ggcaactgcg
     3361 tcgatgcagg taggggcagt gccgacc
//
LOCUS       DAOKIP010000314         3350 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.318,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000314 DAOKIP010000000
VERSION     DAOKIP010000314.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 3350)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3350)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3350
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.318"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(2..271)
                     /locus_tag="QEL58_003848"
     CDS             complement(2..271)
                     /locus_tag="QEL58_003848"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidative damage protection protein"
                     /protein_id="HDS1678274.1"
                     /translation="MPRTVFCQYEQRDAEGLDFVPYPGELGQRVFNNIGKQAWAAWLA
                     HQTMLINENRLSPRTPEHRAFLEGELVKFLFERDAEKPAGFTPEA"
     gene            complement(277..1401)
                     /gene="mutY"
                     /locus_tag="QEL58_003849"
     CDS             complement(277..1401)
                     /gene="mutY"
                     /locus_tag="QEL58_003849"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014036809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="A/G-specific adenine glycosylase"
                     /protein_id="HDS1678275.1"
                     /translation="MPRQPHASADTAQQDGFVARLLHWFDGDGRHDLPWQHPRSPYRV
                     WLSEIMLQQTQVATVIPYFQRFLQHFPTLPDLAAASNDALMAQWAGLGYYARARNLHA
                     AAKRCVELHGGDLPRDFDALHALPGIGRSTAGAILSQAWNDPFAILDGNVKRVLSRYH
                     GIDGFPGLPAIEKQLWAIAEAHVAQVPAGRMADYTQAQMDLGATVCSRAKPACVICPL
                     HDDCMARREGRTAELPTPKPGKTLPEREAVALLLRDAQQRVLLQKRPDTGIWAQLWTL
                     PQAEAGSMLQDWFDAHVDGSLEDAEELPVLQHTFSHYKLHLQVLSRQVHGLRVEEPTL
                     RWVAADELPALGLPAPIRKLLDGTAIKASKRKPSKPHNHE"
     gene            complement(1484..2767)
                     /gene="ftsY"
                     /locus_tag="QEL58_003850"
     CDS             complement(1484..2767)
                     /gene="ftsY"
                     /locus_tag="QEL58_003850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle-docking protein
                     FtsY"
                     /protein_id="HDS1678276.1"
                     /translation="MLSFFRRKKPQDAPATEAPKTQHYSAEELAAAFPSAAPVEEAPA
                     APLAAPTPAPAPVAVPEAPAAAPAPPAAERVIAAEDFEAEALAAAAVLAPLAPVTPAE
                     APAAPAADLPVLVDAAPAPAGKPGWRERLRNSVIARSFGGLFSRNPKLDDDLLDELET
                     ALITADVGVGATTDLVEGLRKRMKSREFADANALLAALRSELIAILQPVAKPLVIDRN
                     AKPFVVLTVGVNGVGKTTTIGKLAKRFKDDGHSLMLAAGDTFRAAAVAQLQAWGERNG
                     VAVVAQGQNADAASVAFDALQAGKARGTSVLIADTAGRLHTQSGLMNELGKIRRVLGK
                     IDPTAPHEVLMVIDGTTGQNALSQLRQFNAAVNVTGLVVTKLDGTAKGGVVFALAREF
                     GIPIRFAGIGERPEDLRAFDPEAFVDALLPEALGG"
     gene            2897..3196
                     /locus_tag="QEL58_003851"
     CDS             2897..3196
                     /locus_tag="QEL58_003851"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005412980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1678277.1"
                     /translation="MNNVMGMALGGMRAAQQGVQVAAHNVANLATPDAQRLQLQRGAV
                     EQGGVQAVVTTIGTASGAPLGDLLGARADVVAFAANATVIRRQDQMLGSLLDRDA"
BASE COUNT          464 a         1070 c         1249 g          567 t
ORIGIN      
        1 atcaggcttc gggggtgaag ccggccggct tttctgcgtc cctctcgaac aggaacttga
       61 ccagttcgcc ttccaggaac gcgcggtgct ccggcgtgcg gggcgaaagg cggttttcgt
      121 tgatcagcat ggtctggtgc gccagccacg ccgcccaggc ctgcttgccg atgttgttga
      181 agacgcgctg gcccagttcg cccgggtagg gcacgaagtc caggccctcg gcatcgcgtt
      241 gttcgtactg gcagaagacg gttcggggca tggcactcac tcgtggttgt ggggtttcga
      301 tggttttcgt ttcgacgcct tgatggcggt gccgtcgagc agcttgcgga tcggcgcggg
      361 caggcccagc gcgggcagtt cgtcggcagc gacccagcgc agcgtgggtt cttccacgcg
      421 caggccgtgt acctgccgtg acagtacctg cagatgcagc ttgtagtggc tgaaggtgtg
      481 ctgcagcacc ggcagttcct cggcatcttc caatgaaccg tcgacgtgcg catcgaacca
      541 gtcctgcagc atgctgccgg cttcggcctg cggcagcgtc cacagctgcg cccagatgcc
      601 ggtgtccggc cgtttctgca gcagcacgcg ctgttgggcg tcgcgcagca gcagcgccac
      661 tgcttcgcgt tcgggcagcg tcttgccggg cttgggcgtg ggcagttcgg cagtgcggcc
      721 ttcgcggcgc gccatgcagt cgtcgtgcag cgggcagatc acgcaggccg gtttcgcgcg
      781 gctgcagacg gtcgcgccca ggtccatctg cgcctgggtg tagtcggcca tgcgtccggc
      841 tgggacctgc gccacatgtg cctcggcgat cgcccacagc tgcttctcga tggccggcag
      901 gccggggaag ccgtcgatgc cgtggtagcg gctgagtacg cgcttgacgt tgccgtcgag
      961 gattgcgaac gggtcgttcc aggcctggct gaggatcgcg ccagcggtgc tgcggccgat
     1021 gccgggcagc gcgtgcagtg catcgaaatc gcgcggcagg tcgccgccgt gcagttccac
     1081 gcagcgcttg gccgcggcgt gcaggttgcg tgcgcgggcg tagtagccga gcccggccca
     1141 ctgcgccatc agcgcgtcgt tgctggccgc ggcaaggtcg ggcagggtcg ggaagtgctg
     1201 caggaaccgc tggaaatacg ggatgaccgt ggccacctgg gtctgctgca gcatgatctc
     1261 cgacagccag acccggtacg ggctgcgcgg gtgctgccag ggcaggtcgt ggcggccgtc
     1321 gccgtcgaac cagtgcagca ggcgggcaac gaagccgtct tgctgggcag tgtcggcgct
     1381 ggcgtgcggc tggcgtggca tcggtgttcc ggaggagggc agccaccttg gagtggctct
     1441 accggttcca gtagagccac cccacgggtg gctgcgcggt gtatcagccg cccagcgctt
     1501 caggcagcag ggcgtcgacg aaggcttccg gatcgaacgc gcgcagatct tccgggcgct
     1561 cgccgatgcc ggcgaagcgg atcgggatgc cgaactcgcg ggccagcgcg aacaccacgc
     1621 cgcccttggc ggtgccgtcc agcttggtca ccaccaggcc ggtcacgttc accgcggcat
     1681 tgaactggcg cagctgcgac agcgcgttct ggccggtggt gccatcgatc accatcagca
     1741 cttcgtgcgg ggcggtgggg tcgattttgc cgagcacgcg gcggatcttg cccagttcgt
     1801 tcatcagccc ggactgggtg tgcaggcggc cggcggtgtc ggcgatcagc accgaggtgc
     1861 cgcgggcctt gccggcctgc agcgcatcga atgccaccga tgcggcatcg gcgttctgcc
     1921 cctgggcgac cacggccacg ccgttgcgct cgccccaggc ctgcagctgg gccacggcgg
     1981 cggcgcggaa ggtatcgccg gcggccagca tcaggctgtg gccgtcgtcc ttgaagcgtt
     2041 tggccagctt gccgatggtg gtggtcttgc cgacgccgtt gacaccgacg gtgagcacca
     2101 cgaagggctt ggcgttgcga tcgatcacca gcggcttggc caccggctgc aggatcgcga
     2161 tcagttcgct gcgcagcgcg gccagcagcg cattggcgtc ggcgaattcg cgcgacttca
     2221 tgcgcttgcg caggccctct accaggtcgg tggtggcacc cacgccgacg tcggcggtga
     2281 tcagcgcggt ttccagctcg tccagcaggt cgtcgtcgag cttggggttg cgcgagaaca
     2341 ggccgccgaa gctgcgtgcg atgacgctgt tgcgcaggcg ttcgcgccag cccggcttgc
     2401 cggccggagc cggggcggcg tcgaccagca ccggcagatc agcggcgggc gcagccggtg
     2461 cttcggccgg ggtgaccggc gccagcggcg cgagcacggc agcagcggcc agggcttcgg
     2521 cttcgaagtc ctctgcggcg atgacgcgtt ccgcagccgg cggtgccggt gcggcggccg
     2581 gcgcttcggg cactgcgacg ggcgcaggtg caggcgtcgg cgcggctagc ggagcggccg
     2641 gggcttcttc gaccggggca gcggacggga atgccgccgc cagctcttca gccgagtagt
     2701 gctgggtctt gggcgcctcc gttgcggggg cgtcctgggg cttcttgcga cggaaaaaac
     2761 tgagcattgg caaaaggcgc tgaaatcaga gggatatgct accactcggg cctgtcgggc
     2821 cgatgtggac tcaaggacgc ggcctgccgg ccgttaaccg gtccggaggg ctgcgcaggc
     2881 tggcccggag accgccatga acaatgtgat gggaatggcc ctcggcggaa tgcgcgcggc
     2941 ccagcagggc gtgcaggtgg ccgcgcacaa cgtggccaac ctggcgaccc ccgatgccca
     3001 gcgcctgcag ctgcagcgtg gtgcggtgga gcagggcgga gtgcaggctg tggtgacgac
     3061 catcggcacc gcatccggcg cgccgctggg tgacctgctg ggggcccggg ccgatgtggt
     3121 ggcgttcgcc gccaacgcca cggtgatccg ccgccaggac cagatgctgg gctcgctgct
     3181 ggaccgggac gcctgaggcg atcggctttg gtgggtgtca accctggatg gcacgctcga
     3241 cccgccctgg taggtgccaa ccttgattgg cacgctcgac ccgccctggt aggtgccaac
     3301 cttggttggc acgcctttgg agcgccaacc aagcttggga tctaccagag
//
LOCUS       DAOKIP010000315         3314 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.319,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000315 DAOKIP010000000
VERSION     DAOKIP010000315.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 3314)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3314)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3314
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.319"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(41..433)
                     /locus_tag="QEL58_003852"
     CDS             complement(41..433)
                     /locus_tag="QEL58_003852"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005412372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HDS1678278.1"
                     /translation="MSAADDGSKDRIAEFTDFRKRMNERILGEPNQVVRRFFALDTQT
                     YQAGALDVKTKELLGLVASMVLRCDDCISYHVAQCKDAGVTREEFFETFSVGLVVGGS
                     IVIPHLRRAVDFLDQLEGGAAAPAAHEH"
     gene            complement(430..720)
                     /gene="grxC"
                     /locus_tag="QEL58_003853"
     CDS             complement(430..720)
                     /gene="grxC"
                     /locus_tag="QEL58_003853"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004146039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin 3"
                     /protein_id="HDS1678279.1"
                     /translation="MTAQTAGGAPAITIYSTAVCPYCVAAKNFLKSKGQQWTEVRIDL
                     DPAEREKMMALTRRTSVPQIFVGDVHVGGYDDMMALHREGKLEPLLAGQGQA"
     gene            809..2509
                     /locus_tag="QEL58_003854"
     CDS             809..2509
                     /locus_tag="QEL58_003854"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HDS1678280.1"
                     /translation="MVAPCPATLGAPCPRTFRLRALLLTTAITLALAMPLAQAQEKLP
                     DIGSSAGELLTPARQAEYGAMMLRELRNYGYLLDDPLVNDWLQTMGTRLGSNSDQPRQ
                     PYTFFVMKDRQINAFATLGGYIGVNAGLVLTAEREDEVAAVLSHEIAHVTQQHVLRGV
                     ERAQRDQIPILLGMLAAVVAAQASNSTSSGNATMAAISSGMGLMQQRQINYTRSNESE
                     ADRLGIRTLARSGYDVDAMAGFFERMAAAMRGNEGGYSVPEFLRTHPVNITRISEAKA
                     RAEQMKKDTVLLTTSTPSGERRERVDPADPSLAEPLLRGNNPLLPSSVLRIPIGQLSR
                     GASGDFDWARERLRVLSADSTAELEREYADMAKRQKDGLNDAQRYGQALAVMRGGRAG
                     AGQARQTLATLLQTRPDNLWLALGLGEAESRAGQAAQANSRFEQLLREHPNSRPVALT
                     YAEILNEQGSREAGQRAQAMLRPLLSQSGNDPVFQQRYARASELAGDSVRASEAYAEA
                     AFLSGRPEQSLIQLQALKRNPALDYVGRARVDARIEAITPTVLELRRQGVQDPDLDRR
                     "
     gene            2626..>3314
                     /gene="phoB"
                     /locus_tag="QEL58_003855"
     CDS             2626..>3314
                     /gene="phoB"
                     /locus_tag="QEL58_003855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002806631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate regulon transcriptional regulator
                     PhoB"
                     /protein_id="HDS1678281.1"
                     /translation="MQKRILIVDDEPAIREMVAFALRKGDYEPVHAGDAREAQTAIAD
                     RVPDLILLDWMLPGTSGLDLARRWRKETLTREVPIIMLTARGEENDRVGGLEAGVDDY
                     VVKPFSARELLARIRAVMRRAREDDEDGSVAVGPIRIDGAAHRVFANDQPVPIGPTEY
                     RLLHFFMTHPERVYTRAQLLDHVWGGSVYVEERTIDVHIRRLRKTLEPFNAENMVQTV
                     RGAGYRFSTAT"
BASE COUNT          561 a         1176 c         1094 g          483 t
ORIGIN      
        1 tgtcgggttc aggcgatgcc ggccagggcc ggcacttcct tcagtgttcg tgcgctgccg
       61 gggcggcggc gccgccttcg agctggtcga ggaaatcgac cgcgcggcgc aggtgcggga
      121 tcacgattga gccgccgacc accaggccga ccgagaaggt ctcgaagaac tcttcacggg
      181 tcaccccggc gtccttgcac tgggccacgt ggtagctgat gcagtcgtcg cagcgcagca
      241 ccatcgaggc caccaggccc agcagttcct tggtcttcac gtccagcgcg ccggcctggt
      301 aggtctgcgt atccagcgcg aagaagcggc gcaccacctg gttcggttcg cccaggatgc
      361 gctcgttcat gcgcttgcgg aagtcggtga actcggcgat gcggtccttg ctgccgtcgt
      421 cggccgcgct catgcctggc cctgcccggc cagcagcggc tcgagcttgc cttcacggtg
      481 cagggccatc atgtcgtcgt aaccgccgac atggacgtcg ccgacaaaaa tctgcggcac
      541 gctggtgcgg cgggtcagcg ccatcatctt ctcgcgctcg gccgggtcca ggtcgatgcg
      601 gacctcggtc cactgctggc ccttgctctt caggaagttc ttggcggcca cgcagtacgg
      661 gcagacggcg gtggaataga tggtgatggc gggggcaccg ccggcggtct gggctgtcac
      721 gggaaactcc acgatggatc gacggtccat atatggtacc ggtgcgctgg aatttccacg
      781 ccacggccgc aacactgtgg attaacgaat ggttgccccc tgccctgcca cgctgggcgc
      841 gccctgtccg aggaccttcc gcttgcgagc cctgctgctg actaccgcca tcaccctggc
      901 cctggccatg ccgctggccc aggcccagga gaagctgccc gacatcggct cctcggccgg
      961 cgagctgctg accccggcgc gccaggccga gtatggcgcg atgatgctgc gcgagctgcg
     1021 caactacggc tatctgctgg acgacccgct ggtcaacgac tggctgcaga ccatgggtac
     1081 ccggcttggc tccaacagcg accagccgcg gcagccgtac acgttcttcg tgatgaagga
     1141 ccgccagatc aacgccttcg ccacgctggg cggctacatc ggggtcaacg ccggcctggt
     1201 attgaccgcc gagcgcgagg acgaggtagc ggcagtgctg tcgcatgaaa tcgcccacgt
     1261 cacccagcag cacgtactgc gtggggtcga gcgcgcccag cgcgaccaga tcccgatcct
     1321 gctgggcatg ctggccgcgg tggtggccgc gcaggccagc aacagcacct cctccggcaa
     1381 cgcgaccatg gccgcgatca gctcgggcat gggcctgatg cagcagcggc agatcaacta
     1441 cacccggtcc aacgaatccg aggccgaccg ccttggcatc cgcaccctgg cccgcagcgg
     1501 ctacgacgtg gacgccatgg ccggcttctt cgagcggatg gcggcggcga tgcgcggcaa
     1561 cgaaggcggc tacagcgtgc cggagttcct gcgcacccac ccggtcaaca tcacccgcat
     1621 cagcgaagcc aaggcccgtg ccgagcagat gaagaaggac acggtgctgc tgaccaccag
     1681 cacccccagc ggcgaacgca gggagcgggt ggacccggcc gaccccagcc tggccgaacc
     1741 gctgctgcgc ggcaacaatc cgctgctgcc cagcagcgtg ctgcgcatcc cgatcggcca
     1801 gctcagccgc ggtgccagcg gcgacttcga ctgggcacgc gagcgcctgc gggtgctcag
     1861 cgccgactcc accgccgaac tggagcgcga atacgccgac atggccaagc gccagaagga
     1921 tggcctgaac gacgcccagc gctatggcca ggccctggcc gtcatgcgcg gcggccgcgc
     1981 cggtgccggg caggcccggc agaccctggc caccctgctg cagacccgcc cggacaacct
     2041 gtggctggcg ctggggctgg gcgaggccga atcgcgcgcc ggccaggccg cccaggccaa
     2101 cagccgcttc gaacagctgc tgcgcgagca ccccaacagc cgcccggtgg ccctgaccta
     2161 tgccgagatc ctgaacgaac agggcagccg tgaggccggc cagcgcgcgc aggccatgct
     2221 gcggccgctg ttgtcgcaaa gcggtaacga tccggtcttc cagcagcgat acgcccgcgc
     2281 cagcgaactg gccggtgaca gcgtgcgcgc cagcgaggcc tatgccgagg cggccttcct
     2341 cagcggtcgt ccggagcagt cgctgatcca gttgcaggcg ctcaagcgca acccggcgct
     2401 ggattatgtc ggccgggcac gggtggacgc gcgcatcgaa gcgatcaccc ccaccgtgct
     2461 ggaactgcgc cgccagggcg tgcaggaccc cgacctcgac cgccgctgag cgccgcatga
     2521 ccgaccgatg gcaatccagg acggttccgg ccgggcagtc acaaacatgt catcaaaccg
     2581 tagtctactg gcaccactcc agtaaccgag ccctacggtg tcctcgtgca gaaacgcatc
     2641 ctgatcgtcg atgacgagcc cgcgatccgt gaaatggtcg ccttcgccct gcgcaagggc
     2701 gactacgaac ctgtccacgc cggcgatgcc cgcgaggcgc agaccgcgat cgccgaccgc
     2761 gtgcccgacc tgatcctgct ggactggatg ctgccaggca ccagtggcct ggacctggcc
     2821 cgccgctggc gcaaggaaac gctgacccgc gaagtgccga tcatcatgct gaccgcccgc
     2881 ggcgaagaga acgatcgcgt cggcgggctt gaagccggtg tcgacgacta cgtggtcaag
     2941 ccgttctcgg cgcgcgaact gctggcccgc atccgtgcgg tgatgcgccg cgcgcgcgag
     3001 gacgacgagg acggcagcgt ggcggtcggc ccgatccgca tcgatggcgc cgcccatcgc
     3061 gtgttcgcca acgaccagcc ggtgccgatc ggcccgaccg aataccgcct gctgcacttc
     3121 ttcatgaccc accccgagcg cgtatacacc cgcgcccagc tgctggacca tgtctggggt
     3181 ggcagcgtgt acgtggagga gcgcaccatc gacgtgcata tccgccgcct gcgcaagacg
     3241 ctggaaccgt tcaacgccga gaacatggtg cagaccgtgc gcggcgccgg ctaccgcttc
     3301 tctactgcaa cctg
//
LOCUS       DAOKIP010000316         3310 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.320,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000316 DAOKIP010000000
VERSION     DAOKIP010000316.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 3310)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3310)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3310
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.320"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(180..989)
                     /gene="dkgB"
                     /locus_tag="QEL58_003856"
     CDS             complement(180..989)
                     /gene="dkgB"
                     /locus_tag="QEL58_003856"
                     /EC_number="1.1.1.346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014038913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,5-didehydrogluconate reductase DkgB"
                     /protein_id="HDS1678282.1"
                     /translation="MTVPAFGLGTFRLKDQTVIDSVRNALEVGYRAIDTAQIYGNEAE
                     VGQAIAESGVPRDDLYLTTKVWITEFKHDALLASLRTSLEKLRTDRVDLALIHWPSPN
                     DKVDVPMEEYLPALAEAKAQGLTREIGISNFTIAQTRKAIEILGAEAIATNQVEIHPY
                     LQNRLLVKFLQDNGIHITAYMSLAYGEVLKDPVIQAIAGRHQATPAQVALAWALQQGF
                     SVIPSSTKRDNLAANLEAAAVRLTDEDMAQIAKLDRGHRLANPEGIAPAWD"
     gene            complement(1078..2292)
                     /locus_tag="QEL58_003857"
     CDS             complement(1078..2292)
                     /locus_tag="QEL58_003857"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005414854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDS1678283.1"
                     /translation="MIRGIPLALLALTLGAFAIGTTEFVIVGLIPTIAADLQVSLPSA
                     GLLVSLYALGVAIGAPVLTALTGRVPRKTLLVALMVLFTLGNVIAFMAPGYSSLIAAR
                     ILTGLAHGVFFSIGAIIATAVVPKEKAASAIAIMFTGLTVALVTGVPLGTFIGQHLGW
                     RATFLAVAGLGVIALLGALLFVPRNLPQSAPASFRQQLAVLGQPRLLLVYAMTALGYG
                     GTFLAFTYLAPILQDVTGFSANAVSLVLLVYGVSVAIGNLWGGRLADRLGPVPALKRI
                     FTLLAIVLFVLTFTASNSVLMLLTVLALGAVAFGNVPGLQVYVVKQAQRYAPQATDVA
                     SGLNIAAFNIGIALGASLGGLVVEHIGLMHTPWLGALVVVGAYALTALSGRLDRRDGI
                     DPRADGIAATVH"
     gene            2399..3301
                     /locus_tag="QEL58_003858"
     CDS             2399..3301
                     /locus_tag="QEL58_003858"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005411584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDS1678284.1"
                     /translation="MKTTLDEMQAFLAVIDSGSISAAAEQLGQTPSGVSRALGRLEDK
                     LGTTLLTRTTRRLHLTAEGEAYRRHARAIIDAVESAEEQMAARRERPAGRLRVDAAMP
                     FVLHVIAPLVAGYRERYPDVQLELNSSDRYIDLLERRTDLAIRIGPLADSTLHARPLG
                     RCRLRLVASPAYLDRLGEPSTVAALGQHTLLGFNEPESLNRWPLPGESEGLLLVRPDI
                     AVSSGETLRRLAVEGVGITCLSDFVTDRDRAAGTLVPVLAAQTLEVYQPIHAVYYRNT
                     AVSARISSFLDYLGEAMAQSDYLR"
BASE COUNT          581 a         1061 c         1170 g          498 t
ORIGIN      
        1 gaccaggggc ggcctctgcc ggatccgcgc catgcgtggc tggttgctgc aggacgagga
       61 ataacccctg cacttggtag gtgccgacct tggtcggcac gctgtgtcat cgaccgatca
      121 gagcccagcg ccgaccaagg tcggcctcta ccaaagcaac tccgcgcccg ccgctgggat
      181 caatcccagg ccggggcgat gccttccggg ttggccaggc gatggccgcg gtcgagcttg
      241 gcgatctgcg ccatgtcttc gtcggtcagg cgcacggccg ccgcttcaag gttggccgcc
      301 aggttgtcgc gcttggtcga cgacggaatg accgagaagc cctgctgcag cgcccaggcc
      361 agcgcaacct gcgccggggt ggcctggtgg cggccggcaa tggcctggat caccgggtcc
      421 ttcagcactt cgccataggc caggctcatg taggcggtga tgtggatgcc gttgtcctgc
      481 aggaacttca ccagcagacg gttctgcagg tacggatgga tctccacctg gttggtggcg
      541 atcgcctcgg caccgaggat ctcgatcgcc ttgcgggtct gcgcgatggt gaagttggag
      601 atgccgatct cccgggtcag tccctgcgcc ttggcttcgg ccagtgccgg caggtattcc
      661 tccatcggca cgtcgacctt gtcattcggc gacggccagt ggatcagcgc caggtcgacg
      721 cggtcggtgc gcagtttttc caggctggtg cgcaggctgg ccagcaacgc atcgtgcttg
      781 aactcggtga tccacacctt ggtggtcagg tacagatcgt cgcgcggcac acccgattcg
      841 gcgatggcct ggccgacttc ggcttcattg ccgtagatct gcgcggtgtc gatggcgcgg
      901 tagccgacct ccagcgcatt gcgcaccgag tcgatcacgg tctggtcctt caggcggaag
      961 gtaccgagac caaaggcggg gacagtcatg ggaagctcca acggggggga agggagtagc
     1021 aggagaagag ggtagggcag gcaccgtatg catgccggca acggtgcatt gcatgaatca
     1081 atgcacggtg gcggcaatgc cgtcggcgcg cggatcgata ccatcgcgac ggtcgaggcg
     1141 accgctgagc gcggtcagcg cataggcgcc aaccaccacc agcgcaccca gccacggcgt
     1201 gtgcatcagg ccgatgtgtt ccaccaccag cccaccgagc gaggcgccca gggcgatgcc
     1261 gatgttgaac gcggcgatgt tcaggcccga ggccacatcg gtggcctgcg gggcatagcg
     1321 ctgcgcctgc ttgaccacgt agacctgcag gcctggcacg ttgccgaagg ccacggcccc
     1381 cagcgccagc accgtcagca gcatcagcac gctgttggag gcggtgaagg tgagcacgaa
     1441 cagcacgatg gccagcagcg tgaagatgcg cttcaacgcc ggtaccgggc ccaggcggtc
     1501 ggccagtcga ccgccccaca ggttgccgat tgccaccgac acgccgtaca ccagcaacac
     1561 caggctgacc gcattggccg agaagccggt gacgtcctgc aggatcggcg ccagataggt
     1621 gaaggccagg aaggtgccgc cgtaacccag tgcggtcatt gcatagacca gcaacaggcg
     1681 cggctggccc agcaccgcca actgctggcg gaagctggcc ggtgcgctct gcggcaggtt
     1741 gcgcggaacg aacagcagtg cgcccagcag ggcgatcacg ccgaggccgg ccacggccag
     1801 gaaggtggcg cgccaaccca gatgctgtcc gatgaaggta cccagcggca caccggtcac
     1861 cagcgccacg gtgagcccgg tgaacatgat ggcgatggca ctggcggcct tctccttcgg
     1921 caccaccgcg gtggcgatga tcgcgccgat cgagaagaac acgccatgcg ccaggccggt
     1981 gaggatgcgt gcggcgatca gtgagctgta gcccggcgcc atgaaggcga tgacgttgcc
     2041 gagggtgaac agcaccatca gcgccaccag cagggtcttg cgcggcacgc ggccggtcag
     2101 cgcggtcagc accggcgcgc cgatggccac gcccagtgca tacagggaaa ccagcaggcc
     2161 ggccgagggc aggctgacct gcaggtcggc ggcaatggtc gggatcaggc cgacgatgac
     2221 gaattcggtg gtgccgatgg cgaacgcgcc gagggtcaac gccagcaggg cgaggggaat
     2281 gccacggatc atgacagggt ccagcagggg aagaggctgc gcagtctgcg ccgccatctc
     2341 tggccgaaaa accggtcttc acgccaatca ctcttgccgt acagtcaata atggcggcat
     2401 gaagacgacg cttgatgaaa tgcaggcctt cctggcggtg atcgacagcg gttcgatcag
     2461 cgccgccgcc gagcagctgg ggcagacgcc gtcgggcgtg agccgcgcgc tggggcggct
     2521 ggaggacaag ctgggcacca cgctgctgac ccgcaccacc cgccgcctgc acctgaccgc
     2581 cgagggcgag gcgtaccggc gccatgcgcg cgcgatcatc gatgcggtgg aatcggccga
     2641 ggaacagatg gcggcgcgcc gcgagcgccc ggccgggcgc ctgcgcgtgg acgcggcaat
     2701 gccgttcgtg ctgcacgtga tcgcgccact ggtggccggc tatcgggagc gctacccgga
     2761 cgtgcagctg gagttgaaca gttccgaccg ctacatcgac ctgctggaga gacgcaccga
     2821 cctggcgatc cggatcgggc cgctggccga ctccacactg catgcacggc cgctgggccg
     2881 ctgcaggctg cggctggtgg ccagcccggc ctatctggac aggctgggcg agccgagcac
     2941 ggtcgccgcg ctgggccagc acaccctgct tggtttcaac gagccggaat cgctgaaccg
     3001 ctggccgctg cccggggagt cggagggatt gctgctggtg cgaccggaca tcgcggtgtc
     3061 cagtggcgag acgctgcgcc ggctggcggt ggaaggggtg gggatcacct gcctgtccga
     3121 cttcgtcacc gatcgcgacc gcgccgccgg cacgctggtg ccggtgctgg ccgcgcagac
     3181 gctggaggtg taccagccga tccatgcggt gtactaccgc aacacggcgg tgtcagcgcg
     3241 gatcagctcg ttcctcgatt acctcggtga agcgatggcg cagagcgatt acctgcgctg
     3301 agcgttgccg
//
LOCUS       DAOKIP010000317         3305 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.321,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000317 DAOKIP010000000
VERSION     DAOKIP010000317.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 3305)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3305)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3305
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.321"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            200..1585
                     /locus_tag="QEL58_003859"
     CDS             200..1585
                     /locus_tag="QEL58_003859"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008268567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent succinate-semialdehyde
                     dehydrogenase"
                     /protein_id="HDS1678285.1"
                     /translation="MSAAPSTAISRDPATGQLIASHPFATDAELEAILDRGQAGFAAW
                     SATSLEQRAGVLRAMAGVLRRDRDALAALATAEMGKVQAEALAEIEKCAVLCDWYADH
                     GAQFLRDEPTQVPDDKAYVSYLPLGVVLGIMPWNFPYWQVMRAAVPILMGGNGFLLKP
                     AENIVGTAQLLDAAWRDAGLPDGTFIAANISREGTSRAIADDRIAAVTLTGSVAAGRS
                     IAAQAGQALKKVVLELGGSDPFIVLADADLDAAVDAAVASRFQNTGQVCIAGKRIIVE
                     EVVYERFVAQFCQKVQALTVGDGREAGNRIGPMARQDLLEQLDAQVRASVEAGAQLLV
                     GGHQLQRPGAFYAPTVLAGVAPGMQAFDTETFGPVASISRARDADHAVELANQSEFGL
                     SGNLWTGDRERAMQLARRLQTGGVFVNGFSASDPRVPIGGVKKSGFGRELSHFGIREF
                     VNAQTVWFDKP"
     gene            1649..3289
                     /locus_tag="QEL58_003860"
     CDS             1649..3289
                     /locus_tag="QEL58_003860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase large subunit"
                     /protein_id="HDS1678286.1"
                     /translation="MSKGSDLLVAALENEGVERIFGIPGEENLDVVESLRHSSIELVV
                     TRHEQAAVFMAATYGRLTGKPGVCLATLGPGALNFTTGAAYALLGAWPVIMITGQKGI
                     VASKQARFQIVDIVSTMKPLTKQARQIVSARTIPTIVREAFRVAQEERPGPVLLELPE
                     DIAANEVEGVALIPPHAVDRPIASPEALDRAAEIIRNAKRPLLMIASAASRPQSSEAL
                     SAFVLRAGIPFFTTQMGKGAVAGGSGLYMGTAALTERDYVHMAIDQADVIVTIGHEVT
                     EKPPFVMRPGGPTVIHIGYSQAAVEQVYFPQVEVIGDIGRALTQLAERIEGAVPNADA
                     LVPLRATILEHIADRAEEEAFTPQRLVHDVRQVMPPDGIVALDNGMYKIWFARNYRTQ
                     VANTLLLDNALATMGAGLPSAIMASILYPQRRVLAVCGDGGFMMNSQELETARRLGLN
                     LVVLILNDGAYGMIRWKQAVDGFTDYGMTFGNPDFVKYAEAYGCRGHEVTAIEQFIPT
                     LEAAFNEGGVHLVSVPIDYSENERVLVDELRQAFPGNG"
BASE COUNT          535 a         1083 c         1146 g          541 t
ORIGIN      
        1 gcttgtgctg ttgcttcggc tgttgctgtt gcagttgctt cggcgggtgc agggcgcagc
       61 cctgccaaga gcccccccat tcaggcaggt aagtgcaggt cacaggataa gcagacgcct
      121 tgttgctgcc atcgaacagg tccacattcc tgtgcaggag atgggccact gcccgtcgtc
      181 gagacaccag gagacctgca tgtccgctgc ccccagcacc gccatttccc gcgatccggc
      241 caccggccag ctcatcgcca gccatccctt cgccaccgac gccgaactgg aggcgatcct
      301 cgatcgcggc caggccggct ttgccgcctg gagcgcaacc agcctcgaac agcgcgccgg
      361 ggtgctgcgc gcgatggctg gtgtactgcg ccgcgaccgc gacgcgctgg ccgcgctggc
      421 caccgccgag atgggcaagg tccaggccga agcgttggcc gagatcgaaa agtgcgccgt
      481 gctgtgcgac tggtacgccg accacggcgc gcagttcctg cgcgacgagc cgacccaggt
      541 gcccgacgac aaggcctacg tgtcctacct gccgttgggc gtggtgctgg gcatcatgcc
      601 gtggaatttc ccgtactggc aggtgatgcg cgccgcggtg ccgatcctga tgggcggcaa
      661 cggcttcctg ctgaagccgg ccgagaacat cgtgggtacc gcgcagctgc tggatgcggc
      721 ctggcgtgat gccgggttgc cggacggcac cttcatcgcc gccaacatca gccgcgaggg
      781 caccagccgc gcgattgccg atgaccgtat cgccgcggtg accctgaccg gcagcgtggc
      841 ggccggtcgc agcatcgccg cccaggccgg gcaggcgctg aagaaggtgg tgctggagct
      901 gggtggctcc gatccgttca tcgtgctggc cgatgccgat ctggatgccg ccgttgatgc
      961 cgcagtggcc tcgcgcttcc agaacaccgg gcaggtctgc attgccggca agcgcatcat
     1021 cgtcgaagag gttgtctacg agcgtttcgt ggcgcagttc tgccagaagg tgcaggcgct
     1081 gacggtcggc gacggccgcg aggccggcaa ccgcatcggc ccgatggcgc gccaggacct
     1141 gcttgaacag cttgatgcgc aggtgcgtgc ttcggtggag gccggtgcac agctgctggt
     1201 cggtggccat caactgcagc gcccgggcgc gttctatgcc cccaccgtgc tggccggcgt
     1261 ggcgccgggc atgcaggcct tcgataccga gaccttcggg ccggtggcct cgatcagccg
     1321 cgcgcgcgat gccgatcacg cggtggaact ggccaaccag agcgagttcg gcctcagcgg
     1381 caacctgtgg accggtgacc gcgagcgcgc catgcagctg gcgcgccggc tgcagaccgg
     1441 cggcgtgttc gtcaacggct tctcggcgtc cgacccgcgc gtgccgatcg gcggcgtgaa
     1501 gaagagcggc ttcggccgcg agctctcgca cttcggcatc cgtgaattcg tcaacgcgca
     1561 gacggtgtgg ttcgacaagc cttgacgcgc ggctctcatc cttcctgcaa cgatccacca
     1621 tcagtccagc gaaaaggacg gcattccaat gtccaagggt tcagacctgc tcgtcgccgc
     1681 gcttgagaac gaaggcgtcg agcgtatttt cggcatcccc ggcgaagaaa acctcgacgt
     1741 ggtcgagtcg ctccgccatt ccagcatcga gctggtcgtc acccgccatg agcaggcggc
     1801 ggtgttcatg gcggccacct atgggcgcct gaccggcaag cccggcgtgt gcctggccac
     1861 gcttggcccg ggcgcgctca acttcaccac cggcgcggcg tatgcgttgc tgggtgcgtg
     1921 gccggtgatc atgatcaccg ggcagaaggg catcgtcgcc agcaagcagg cgcgcttcca
     1981 gatcgtcgac atcgtcagca cgatgaagcc gttgaccaag caggcacggc agatcgtctc
     2041 ggcgcgcacc atcccgacca ttgtccgcga ggcgttccgc gtggcccagg aagagcggcc
     2101 gggtccggtg ctgctggaac tgccggaaga catcgcggcc aacgaggtcg agggcgtggc
     2161 attgattccc ccgcacgcgg tggatcgccc cattgccagc ccggaggcgc tcgaccgtgc
     2221 ggcggagatc atccgcaacg ccaagcgtcc gctgctgatg atcgcttcgg cggcgtcgcg
     2281 gccacagtcc agcgaagcgc tgtcagcgtt cgtgctgcgt gccggcattc cgttcttcac
     2341 cacgcagatg ggcaagggtg cggtggccgg tggctcgggc ctgtacatgg gcaccgcggc
     2401 gctgaccgag cgcgactacg tgcacatggc gatcgaccag gccgacgtga tcgtcaccat
     2461 cggccacgag gtcaccgaaa agccgccgtt cgtaatgcgc ccgggcggcc cgaccgtgat
     2521 ccatatcggc tactcgcagg cagcggtgga acaggtgtac ttcccgcagg tggaggtgat
     2581 cggtgacatc ggccgcgcgc tgacccagct ggccgaacgc atcgagggtg cggtgccgaa
     2641 cgccgatgcg ctggtgccgc tgcgcgcgac catcctggag cacatcgccg accgtgccga
     2701 ggaggaagcg ttcaccccgc agcggctggt gcacgacgtc cgccaggtga tgccaccgga
     2761 cggcatcgtg gcgctggaca acggcatgta caagatctgg ttcgcgcgca actaccgcac
     2821 ccaggtggcc aatacgctgc tgctggacaa cgcgctggcg acgatgggcg cgggcctgcc
     2881 ttcggcgatc atggcctcga tcctgtaccc gcagcggcgg gtgctggcgg tgtgcgggga
     2941 tggcggtttc atgatgaaca gccaggagct ggaaacggcg cgccggctgg gcctgaacct
     3001 ggtggtgctg atcctcaacg acggcgccta cgggatgatc cgctggaaac aggcggtgga
     3061 tggtttcacc gactacggca tgaccttcgg caacccggat ttcgtcaagt acgccgaggc
     3121 ctatggctgc aggggccatg aggtgaccgc catcgagcag ttcatcccga ccctggaagc
     3181 ggcgttcaat gagggtgggg tgcacctggt gtcggtgccg atcgactatt cggagaacga
     3241 gcgggtgctg gtggacgaac tgcgccaggc gttccccggc aacggctgac gccggcgccg
     3301 cgcgg
//
LOCUS       DAOKIP010000318         3262 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.322,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000318 DAOKIP010000000
VERSION     DAOKIP010000318.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 3262)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3262)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3262
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.322"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(33..605)
                     /gene="orn"
                     /locus_tag="QEL58_003861"
     CDS             complement(33..605)
                     /gene="orn"
                     /locus_tag="QEL58_003861"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005413827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligoribonuclease"
                     /protein_id="HDS1678287.1"
                     /translation="MADNGAANERLIWIDLEMTGLDTDNDSIIEIATVVTDAQLNVLA
                     EGPEFAIHHPVETLEAMDEWNRNQHRRSGLWQRVVDSTTTLGQAEAQTVNFLAQWIPA
                     GLSPMCGNSICQDRRFLHRQMPRLEKYFHYRNLDVSTVKELAKRWAPTVAAGVGKNSN
                     HTALSDVHDSIAELRHYRQFMGALSGLPTA"
     gene            complement(681..1205)
                     /gene="tadA"
                     /locus_tag="QEL58_003862"
     CDS             complement(681..1205)
                     /gene="tadA"
                     /locus_tag="QEL58_003862"
                     /EC_number="3.5.4.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005417177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA adenosine(34) deaminase TadA"
                     /protein_id="HDS1678288.1"
                     /translation="MTDTLGVPVHDADEHWMRHALALAERAQREFDEIPVGAVLVGAD
                     GQLLGEGWNLNIASHDPSAHAEIVAMRAGGRLLANHRLLGSTLYVTLEPCAMCAMAIV
                     HARVSRLVYGASDPKTGACGSVFDLLGDARHNHRVEIHGGVLAKEASTRLTNYFRAKR
                     GKPPLLLEGHADEG"
     gene            complement(1281..1640)
                     /locus_tag="QEL58_003863"
     CDS             complement(1281..1640)
                     /locus_tag="QEL58_003863"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDS1678289.1"
                     /translation="MPFPGDVYAADCSARDALALISGKWVMLLLPALAQGPMRNGALL
                     RKIEGLSQKVLTQTLRQLERNGLVERCDRGSKPLHVEYRLTEVARSLVDTLAALDRWA
                     EHNFPALDAARDRFDAR"
     gene            1719..2486
                     /locus_tag="QEL58_003864"
     CDS             1719..2486
                     /locus_tag="QEL58_003864"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HDS1678290.1"
                     /translation="MHALILLAHPEPRSFNAHLAAQATEQLQHEGLQVDMIDLYADAF
                     DPLEAARHHPQRLQPGHFDAQREQRHSAEQGQLPAEVQRHLRLLQATDLLILQFPLWW
                     FAAPALLKGWLDRVLVYGPIYNSRQRHEHGVMRGKRALLSVTTGSSARACAVDGREGD
                     TRLLLWPLMYSLRYVGFEVMQPHVVHGVRSGLPPERVQAHDAALEAATGNYRERLAHW
                     QQWPSVPFNDSEDFEDGVVLRADATAFSPFIRHRNGE"
     gene            2554..2991
                     /locus_tag="QEL58_003865"
     CDS             2554..2991
                     /locus_tag="QEL58_003865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010484891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyltransferase"
                     /protein_id="HDS1678291.1"
                     /translation="MTTLRPSRADDGAALVDLWRRAVDATHDFLSAEDRQAIDAEVAG
                     FLPQAPMTVAADAQDRPLGFMLIDGSHMEALFIDPDVRGTGIGRQLLQHALALHPQLS
                     TDVNAQNAQAVGFYLRMGFVETGRSPVDSQGRPYPLIHLRHNG"
     gene            3050..3256
                     /locus_tag="QEL58_003866"
     CDS             3050..3256
                     /locus_tag="QEL58_003866"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005413830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1678292.1"
                     /translation="MDGAKALLTLFALGISLVWILVPFAIFAVRNLLREVLVEQRRTN
                     ELLEHIGGYRIPRPQPEPTAWRAP"
BASE COUNT          521 a         1129 c         1052 g          560 t
ORIGIN      
        1 cggtagcgcc gggccatgcc cggtggcgtc gttcaagcag tcggcaggcc cgacagcgcg
       61 cccatgaact ggcggtagtg gcgcagctcg gcgatcgagt cgtgcacatc gctcagcgcg
      121 gtatggttgc tgttcttgcc gaccccggcg gccacggtcg gcgcccagcg cttggccagt
      181 tccttcaccg tggacacgtc caggttgcgg taatggaagt acttctccag gcgcggcatc
      241 tggcgatgca ggaagcggcg gtcctggcag atggagttgc cgcacatcgg cgacaggccg
      301 gccggaatcc actgcgccag gaagttcacc gtctgcgcct ccgcctggcc aagcgtggtg
      361 gtactgtcca ccacacgctg ccacaggccc gaacggcggt gctggttgcg gttccactca
      421 tccatcgcct ccagtgtttc caccgggtga tgaatggcga actccggccc ttcggccagc
      481 acgttgagct gggcatcggt gaccacggtg gcaatctcga tgatcgaatc gttgtcggta
      541 tccagcccgg tcatttccag gtcgatccag atcagtcgtt cgttggccgc gccgttgtcc
      601 gccattatgt cgcctcgttg ctgggcaggc gcgcggccta ccggataggg aaagaggcgc
      661 ccatcatacc cgttcgccgt tcagccctcg tcggcgtggc cttccagcag cagcggcggc
      721 ttgccccgct tggcacggaa ataattggtc aggcgcgtgc tggcttcctt ggccaggacg
      781 ccgccgtgga tctcgacgcg gtgattgtgg cgggcgtcgc cgagcagatc gaacacgctg
      841 ccacacgccc cggtcttggg gtcgctggcc ccgtagacca ggcgcgagac gcgcgcatgc
      901 acgatcgcca tcgcgcacat cgcacacggc tccagggtca cgtacagggt gctgccaagc
      961 agccggtgat tggccagcag cctgccccct gcccgcatgg ccacgatctc ggcgtgcgcg
     1021 ctgggatcgt gcgaggcgat gttgagattc cagccctcgc ccagcagctg gccatcggcg
     1081 ccgaccagca ccgccccgac cggaatctcg tcgaactcgc gctgcgcgcg ttcggccagc
     1141 gccagtgcat ggcgcatcca gtgctcatcg gcgtcgtgca ccggtacacc cagggtgtcg
     1201 gtcatggcgg ttctcgcgtc gttgctgggc caggatggcc gccggggcga tagtgtacgc
     1261 cccggctcgt gcaggcgtcg ctaacgcgcg tcgaagcgat cgcgggccgc atccagtgcg
     1321 gggaagttgt gctcggccca acggtccagc gcagccagcg tgtcgaccag gctgcgcgcg
     1381 acctcggtca gccggtactc cacgtgcagc ggcttgctgc cccggtcgca gcgctcaacc
     1441 aggccgttgc gctccagttg ccgcagggtc tgggtcagta ctttctgcga gaggccttcg
     1501 atcttccgca gcagcgcgcc attgcgcatc gggccctgtg ccaaggcagg caacagcagc
     1561 atcacccact tgccggagat cagcgccaac gcatcgcgcg ccgagcagtc cgccgcatag
     1621 acatcgccgg gaaagggcat ggttacctca aggtgcgtaa ttgccggggt gcgccggcct
     1681 cgcgaggatg gtcgcacact ccatcacgcc ctttccgcat gcatgccctg atcctgctgg
     1741 cccatcccga accgcgctcg ttcaatgccc atctggctgc ccaggcaacc gagcagctgc
     1801 aacatgaagg cctgcaggtg gacatgatcg acctgtacgc ggatgccttc gacccgctgg
     1861 aagcggcccg tcaccatccg cagcgcctgc agcccggcca cttcgatgcg cagcgcgagc
     1921 agcggcacag cgccgaacag ggacagctgc cggctgaggt gcagcgccac ctgcgcctgc
     1981 tgcaggccac cgacctgctg atcctgcagt ttccgctgtg gtggttcgcg gcgccggcct
     2041 tgctgaaggg ctggctggat cgcgtgctgg tctacggacc gatctacaac agccggcagc
     2101 gccacgagca cggcgtgatg cgcggcaagc gcgcgttgct gagcgtcacc accggctcat
     2161 cggcgcgggc atgcgcggtg gacggccgcg agggcgacac ccggctgctg ctgtggccgt
     2221 tgatgtacag cctgcgctac gtcggcttcg aggtgatgca gccgcacgtg gtgcatggcg
     2281 tgcgttccgg gcttccaccc gaacgcgtgc aggcacacga tgccgcgctg gaggccgcca
     2341 ccggcaacta ccgcgaacgg ctggcgcact ggcaacaatg gccgagcgtg ccgttcaatg
     2401 acagcgagga cttcgaggac ggcgtggtgc ttcgtgcgga cgcaaccgcg ttcagcccct
     2461 tcatccgcca tcgcaacggg gaatgaatcc acgcctgcag ccatcgcccg gaatctgcat
     2521 actgcacatt cttccgaagc accttggtga cccatgacca ccctgcgccc ctcgcgcgcc
     2581 gacgacggcg ccgccctcgt cgatctgtgg cgtcgcgccg tcgacgccac ccacgacttc
     2641 ctcagcgccg aagatcgcca ggccatcgat gccgaagtgg ccggtttcct gccgcaggcg
     2701 ccgatgaccg tcgccgctga tgctcaggat cgcccactgg gtttcatgct gatcgacggc
     2761 agccacatgg aagcactgtt catcgacccg gacgtgcgtg gcaccggcat cggccggcag
     2821 ctgctgcagc atgcactggc cctgcatccg cagctgagca ccgacgtcaa cgcgcagaac
     2881 gcgcaggccg tgggtttcta cctgcgcatg ggctttgtcg aaaccggacg ctcacctgtg
     2941 gattcacagg gccgcccgta tccgttgatc catctgcggc acaacggctg acattctcca
     3001 gcagccgccc catgctaacg tggccgcttc gaatcgagga atgccgtgca tggatggtgc
     3061 aaaagccctg ttgaccctgt tcgcgctggg catcagcctg gtctggatcc tggtgccgtt
     3121 cgccatcttc gccgtgcgca atctgttgcg cgaggtgctg gtcgagcagc gccgcaccaa
     3181 cgaactgctc gagcatatcg gcggctaccg cattcccagg ccgcaacccg aaccgaccgc
     3241 ctggcgcgcg ccctgagcag ga
//
LOCUS       DAOKIP010000319         3066 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.325,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000319 DAOKIP010000000
VERSION     DAOKIP010000319.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 3066)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3066)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3066
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.325"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(60..1154)
                     /gene="dinB"
                     /locus_tag="QEL58_003867"
     CDS             complement(60..1154)
                     /gene="dinB"
                     /locus_tag="QEL58_003867"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012479032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase IV"
                     /protein_id="HDS1678293.1"
                     /translation="MNALRKIIHVDMDAFYASVEQRDDPSLRGKPVVVAWRGARSVVC
                     AASYEARVFGVRSAMPALRAERLCPDAIFVPPDFARYKAVSRQVREIFLRHTDLVEPL
                     SLDEAYLDVTEPKSGIELATDIARTIRTQIREETQLTASAGIAPNKFLAKIASDWRKP
                     DGQFVIPPQRVDAFLLPLPVNRVPGVGKVMEGKLAARGIVTCGDLRQWALVDLEEAFG
                     SFGRSLYNRARGVDERPVEPDQQVQSISSEDTFAEDLLLEDLSEAIVQLAEKTWHATR
                     KTERVGHTVVLKLKTAQFRILTRSFTPERPPESMEELRDIALALRARVDLPAETRYRL
                     VGVGLGGFREKEPVVQGELFEHGTNDSEGN"
     gene            1346..1861
                     /gene="fabA"
                     /locus_tag="QEL58_003868"
     CDS             1346..1861
                     /gene="fabA"
                     /locus_tag="QEL58_003868"
                     /EC_number="4.2.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011035827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-[acyl-carrier-protein] dehydratase
                     FabA"
                     /protein_id="HDS1678294.1"
                     /translation="MTRLHAFNRDQLLASARGELFGAAAGRLPNDPMLMFDRITEIRE
                     DGGPHGKGMVRAELDIRPDLWFFGCHFIGDPVMPGCLGLDAMWQLTGFFLTWLGAPGK
                     GRALGCGEVKFTGQVLPDAKLVRYEIDISRVINRKLVMAQSDARMYVDDREIYSARDL
                     RVGLFTETGSF"
     gene            1861..>3066
                     /gene="fabB"
                     /locus_tag="QEL58_003869"
     CDS             1861..>3066
                     /gene="fabB"
                     /locus_tag="QEL58_003869"
                     /EC_number="2.3.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019237990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase I"
                     /protein_id="HDS1678295.1"
                     /translation="MRRVVITGMGITSCLGNDLDTVSAALREGRSGITTLADHAEAGL
                     RSQVGGRVDLDLDALIDRKQKRFMSDAAAFAYLSMRDAIADAGLSPEQVSNMRTGLIA
                     GSGGGSSEWQIGAVDLLRERGVRKVGPYMVPRTMCSTVSACLATAYQIKGVSYSLSAA
                     CATSAHCIGAAADMIRHGAQDIMFAGGGEDLHWSMSVMFDAMGALSTSFNETPASASR
                     PYDKDRDGFVIAGGGGMLVLEDYDHAVARGAHIHAELIGYGVTSDGADMVAPSGEGAV
                     RCMKMALQGIDRPLDYLNTHGTSTPLGDVTELNAIREVFGEAVPPLSSTKALSGHSLG
                     AASVHEAIYCLLMMRDGFVAGSANIAELDPKVESFPILRESREQRLDTVMSNSFGFGG
                     TNAALVFGRV"
BASE COUNT          500 a         1035 c          999 g          532 t
ORIGIN      
        1 gagtcgagcc atgctcgact gccgttcgtt gcggaatcga aatgttcgac ggcgaacgat
       61 caattgcctt cagaatcgtt cgttccgtgc tcgaacaatt cgccctgcac caccggctcc
      121 ttttcgcgga aaccgcccag gccgacgccc accaggcggt agcgggtttc ggccggcagg
      181 tcgacgcggg cacgcagggc cagggcgatg tcgcgcagtt cttccatcga ttccggcggg
      241 cgctccgggg tgaagctgcg ggtaaggatg cggaactgcg cggtcttcag cttcagcacc
      301 acggtgtggc cgacgcgctc ggtcttgcgg gtggcatgcc aggtcttctc cgccagctgc
      361 acgatcgcct cgctcaggtc ctccagcagc aggtcttcgg cgaaggtgtc ctccgaagaa
      421 atcgactgca cctgctggtc cggttccacc ggccgctcgt ccacaccgcg tgcgcggttg
      481 tacaggctgc ggccgaagct gccgaacgcc tcttccagat caaccagcgc ccactgccgc
      541 aggtcgccgc aggtgacgat gccgcgcgcg gccagcttgc cttccatcac cttgcccacg
      601 ccgggcaccc ggttcaccgg cagcggcagc aggaacgcgt ccacacgctg cggtggaatc
      661 acgaactggc cgtccggctt gcgccagtcc gaagcgatct tggccaggaa cttgttcggc
      721 gcgatcccgg ctgaagcggt cagctgggtt tcttcacgga tctgcgtgcg gatggtgcgg
      781 gcaatgtcgg tggccagttc gatgccgctc ttcggctcgg tcacgtccag gtaggcctcg
      841 tccagcgaca gcggctcgac cagatcggta tggcgcagga agatctcgcg cacctggcgt
      901 gacaccgctt tgtaacgtgc gaagtccggc ggcacgaaga tcgcatccgg acacaggcgt
      961 tcagcacgca gcgccggcat cgccgagcgc acgccgaaca cgcgggcttc gtaggaggcc
     1021 gcacacacca ccgatcgggc gccgcgccat gccacgacca ccggcttgcc acgcagtgac
     1081 ggatcgtcgc gctgctccac cgacgcgtag aaggcgtcca tgtcgacgtg gatgatcttg
     1141 cgcagtgcgt tcatggttgg ccgacatcat acccgtaccg taccggtcca aacggcgaag
     1201 tatggtcgtt gtgcatcaac gggatgcgcg atctgggcgg aaaacactac gcacgcgtac
     1261 ggtgcggcgg tttgattccc gctgcaaccg tcgtgcatcc tcgacggatt gttgcctcgt
     1321 tttcgcttcc aggattgcgc tttccatgac tcgtctccac gcgttcaacc gcgaccagct
     1381 gctggccagc gcacgcggtg aactgttcgg cgccgccgcc ggccgtctgc ccaatgatcc
     1441 gatgctgatg ttcgaccgca tcaccgaaat ccgcgaggac ggcggaccgc atggcaaagg
     1501 catggtacgc gccgaactgg atatccgccc ggatctgtgg ttcttcggct gccatttcat
     1561 cggcgacccg gtgatgcccg gctgcctggg cctggatgcc atgtggcagc tgaccggctt
     1621 cttcctgacc tggctgggcg cccccggcaa gggccgcgcg ctgggctgcg gtgaagtgaa
     1681 gttcaccggc caggtgctgc cggatgccaa actcgtgcgc tacgagatcg acatcagccg
     1741 ggtcatcaac cgcaagctgg tgatggccca gtcagacgcc cgcatgtacg tggatgaccg
     1801 cgaaatctac agcgcgcgcg acctgcgcgt cggcctgttc actgaaaccg ggagcttctg
     1861 atgcgtcgcg tcgtcatcac cggcatgggc atcacgtcct gcctcggcaa tgatctggat
     1921 accgtttcgg ccgcgctgcg cgaaggccgc tcgggcatca ccacgctggc cgaccacgcc
     1981 gaagccgggc tgcgcagcca ggtcggcggc cgtgtcgacc tcgacctgga cgcgctgatc
     2041 gaccgcaagc agaagcgctt catgagcgat gcggccgcct ttgcctacct gtccatgcgc
     2101 gatgccatcg ccgatgccgg gctcagcccc gagcaggtca gcaacatgcg caccggcctg
     2161 atcgccggct ccggtggcgg ctccagtgaa tggcagatcg gcgcggtcga cctgctgcgc
     2221 gaacgtggcg tgcgcaaggt cggcccgtac atggtgccgc gcacgatgtg ctcgacggtc
     2281 tcggcctgcc tggccaccgc ctaccagatc aagggcgtca gctactcgct gtcggccgcc
     2341 tgcgcgacct cggcgcactg catcggcgcg gccgcggaca tgatccgcca cggcgcgcag
     2401 gacatcatgt tcgccggtgg cggcgaagac ctgcactggt cgatgagcgt gatgttcgac
     2461 gcgatgggtg ccctgtcgac cagcttcaac gagaccccgg ccagcgcctc gcgcccgtac
     2521 gacaaggacc gcgacggctt cgtcatcgcc ggtggcggcg gcatgctggt gctggaggac
     2581 tacgaccacg ccgtcgcacg cggtgcgcac atccatgccg aactgatcgg ctacggcgtg
     2641 acctccgacg gtgccgacat ggtggcgccg tccggcgaag gcgccgtgcg ctgcatgaag
     2701 atggcgctgc agggcatcga tcgcccgctg gactacctca acacccacgg cacttcgacc
     2761 ccgctgggcg acgtcaccga gctcaacgcg atccgcgaag tgttcggcga ggcagtgcca
     2821 ccgctgtcct cgaccaaggc gttgtccggc cattcgctgg gcgcggccag cgtgcacgag
     2881 gcgatctact gcctgctgat gatgcgcgac ggcttcgttg ccggttcagc caacatcgcc
     2941 gagctggacc cgaaggtgga gagcttcccg atcctgcgcg aaagccgcga gcagaggctg
     3001 gatacggtga tgtccaacag cttcggcttc ggtggcacca acgccgcgct ggtgttcggg
     3061 cgggtg
//
LOCUS       DAOKIP010000320         3000 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.327,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000320 DAOKIP010000000
VERSION     DAOKIP010000320.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 3000)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3000)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3000
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.327"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            <1..2891
                     /locus_tag="QEL58_003870"
     CDS             <1..2891
                     /locus_tag="QEL58_003870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDS1678296.1"
                     /translation="TPCLLPAAAHAQDTKASVRWQIPAGALDQALTAFGQQSGLSIAA
                     DARLTRGRHSNGVQATLDADAALAQLLAGTGLTFQRDASGVVLQAAPNAEAGVRQIGT
                     LRVAGQASEGASPWGLADADAVYRDSGSRVHLDRQQLERFRGQSIGDVLAGAVGVHTA
                     DVRNGGALDVNIRGLQGQNRVPVIIDGGQQAIDVYRGYAGVQQRSYLDPDLISAVSIE
                     KGPSLAANAASAIGGVVYMETLNVDDILDDGQDWGLRVRGGVADNSIDRTRVFKQVAR
                     GSDNRNSLRDPRDWNGSVAFAQRGEDWQLVAAYARRRQGNYFAGSNGAHRYDDQHLSS
                     GGTGMSSQAVSKLFHPGDEVLNTHTDNESALLKFTWTPDPDQRLELSHRFFNSSFGEI
                     MPSAIGRVGESNEWVTYVDKANTMFQFEPGKMRVNATSLRHRYRPEAHPWLDLSSTLW
                     FTTATSRMFNSNIANTPLFKNYPGDAMPDTLGETYGPGLQSDVKTQRWGVDSSNTTRF
                     SNDLGEWTLRYGAAFQHEDTAPNSPVLPVDYNNNRYLRSGTRREASVVASLQWQPWDW
                     LSLTAGGRFIDYRTRDRNRVAFVSESRDLRYTFARLSKGGQLLPGWYKEWYPDAQGNY
                     TYDSLRATPYGDSTLGQAYDFDGFIPDPRGANGFYTKQIPIAWGYKPAIRRSGHGFAP
                     YAEARFNLDEDMFFYVKYAQGWKMPSLFESTLGNSTSAPVADLKPEKNRSWDIGFSLL
                     KQDLWRDGDRLAFKVAWFKNDIDNAITRRFDSSTWAFYVDNVDNYTVSGYELQSGYDA
                     GIAYLDLSASYYQRARTCDAATAKRLREDPYAKWSKLDTTPDCVDGGFGTSFVNAQNP
                     PRYSIHSTLGFRLFDRRLDTGIRRTYNSGPTHELDKPWNTTGSTGLQNIYLPTAIYDF
                     YARWQFTPKAEVELVVSNLRDTYYMDTLAMSLMPGPGRTTRLNFTARF"
BASE COUNT          551 a         1064 c          939 g          446 t
ORIGIN      
        1 ccaccccgtg cctgttgccg gccgccgccc atgcacagga caccaaagca tccgtgcgct
       61 ggcaaatccc ggcgggtgcg ctcgaccagg ccctgaccgc gttcggccag cagtccggcc
      121 tgtccatcgc cgccgatgcg cgcctgaccc ggggtcgcca cagcaacggc gtacaggcca
      181 cgctcgacgc cgatgccgca ttggcacagc tgctggccgg taccggcctg accttccagc
      241 gtgatgccag cggtgtggtg ctgcaggcgg cacccaacgc tgaagcagga gtgcgccaga
      301 tcggcaccct gcgcgtggct ggccaggcca gcgaaggcgc ttcgccgtgg ggcctggccg
      361 acgccgatgc ggtctaccgt gacagcggct cgcgcgtgca cctggaccgc cagcagctgg
      421 aacgcttccg cggccagtcg atcggcgatg tgctggccgg tgcggtcggc gtgcataccg
      481 ctgacgtccg caatggcggc gcgctggacg tcaacatccg cggcctgcag ggccagaacc
      541 gggtgccggt gatcatcgac ggcggccagc aggccatcga cgtgtaccgc ggctatgccg
      601 gcgtgcagca gcgcagctac ctcgatccgg acctgatcag cgcggtcagc atcgagaagg
      661 gaccgagcct ggccgccaat gccgccagcg cgatcggcgg cgtggtctac atggaaacgc
      721 tgaacgtcga tgacatcctc gacgatgggc aggactgggg cctgcgcgtg cgcggcggcg
      781 tggccgacaa cagtatcgac cgcacgcgcg tgttcaagca ggtagcgcgt ggcagcgaca
      841 accgcaacag cctgcgcgac ccgcgtgact ggaatggcag cgtggccttc gcccagcgcg
      901 gcgaagactg gcagctggtg gccgcctatg cacgtcgccg ccagggcaac tactttgccg
      961 gcagcaacgg cgcgcaccgc tacgacgacc agcacctgtc cagcggcggc accggcatgt
     1021 ccagccaggc ggtgtccaag ctctttcatc caggcgatga ggtactcaac acgcataccg
     1081 acaacgaatc ggcactgctg aaattcacct ggacacccga ccccgaccag cgcctggagc
     1141 tgagccaccg cttcttcaac tccagcttcg gcgagatcat gccgtcggcg atcggccgcg
     1201 tgggcgagtc caacgaatgg gtgacctacg tggacaaggc caacaccatg ttccagttcg
     1261 agccggggaa gatgcgggtc aacgccacct cgctgcgcca ccgctaccgg cccgaggcac
     1321 acccgtggct ggacctgagc agtaccctgt ggttcaccac cgccaccagc cgcatgttca
     1381 acagcaacat cgccaacacg ccgctgttca agaactatcc gggcgacgcc atgcccgaca
     1441 cgctgggcga gacctacggc ccgggcctgc agtcggacgt gaagacccag cgctggggcg
     1501 tggacagcag caacaccacc cgcttcagca acgatctggg tgagtggacg ctgcgctacg
     1561 gtgccgcctt ccagcatgag gacaccgcgc cgaattcacc ggtgctgccg gtggactaca
     1621 acaacaaccg ctacctgcgc tcgggcacgc gccgcgaagc cagcgtcgtc gcctcgctgc
     1681 agtggcagcc gtgggactgg ctgtcgctga ccgcgggcgg ccgcttcatc gactaccgca
     1741 cccgtgaccg caaccgcgtg gccttcgtca gcgaatcgcg tgacctgcgc tataccttcg
     1801 cgcggctgag caagggcggc cagctgctgc cgggctggta caaggagtgg tacccggacg
     1861 cacagggcaa ctacacgtat gactcgctgc gcgccacgcc gtatggcgac agcacgctgg
     1921 gccaggccta cgacttcgat ggcttcattc ccgatccgcg cggtgccaac ggcttctaca
     1981 ccaagcagat tcccatcgcg tggggctaca agccggcgat ccgccgctcc ggccatggct
     2041 tcgcgccgta tgccgaggcc cgcttcaacc tcgatgagga catgttcttc tacgtgaagt
     2101 acgcgcaggg ctggaagatg cccagcctgt tcgaatcgac gctgggcaac agcacctcgg
     2161 cgccagtggc cgacctgaag ccggaaaaga accgctcctg ggacatcggc ttcagcctgc
     2221 tcaagcagga cctctggcgt gacggcgacc gcctggcgtt caaggtggcc tggttcaaga
     2281 acgatatcga caacgcgatc acccgccgct tcgattccag cacctgggcg ttctacgtcg
     2341 acaacgtcga caactacaca gtgtccggct acgagctgca gtcgggctat gacgccggca
     2401 ttgcctacct ggacctgtcg gccagctact accagcgcgc gcgcacctgc gatgcggcca
     2461 ccgccaagcg cctgcgcgaa gacccgtatg ccaagtggag caagctggat accacgccgg
     2521 actgcgtgga cggcggcttc ggtacctcgt tcgtcaacgc gcagaatccg ccgaggtact
     2581 cgatccacag cacgctgggc ttccgcctgt tcgaccgccg cctggatacc ggcatccgcc
     2641 gcacctacaa cagtggcccc acccatgaac tggacaagcc ctggaacacc accggttcga
     2701 ccggcctgca gaacatctac ctgcccaccg cgatctatga cttctacgcg cgctggcagt
     2761 tcaccccgaa agccgaggtg gaactggtgg tcagcaacct gcgcgacacc tactacatgg
     2821 acacgctggc gatgagcctg atgccgggcc cgggccgcac cacgcggctg aacttcaccg
     2881 cacgcttctg agccctgcgg atacgacagc gccccgggga gatcctcccc ggggcgcttg
     2941 cctgcgcgac tcacgctccg gcaggtgccg gcgactcagc actggcaggt gccaaccttg
//
LOCUS       DAOKIP010000321         2988 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.328,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000321 DAOKIP010000000
VERSION     DAOKIP010000321.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 2988)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2988)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2988
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.328"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            245..835
                     /gene="rimP"
                     /locus_tag="QEL58_003871"
     CDS             245..835
                     /gene="rimP"
                     /locus_tag="QEL58_003871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019300413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimP"
                     /protein_id="HDS1678297.1"
                     /translation="MSDKATDIANLLAPTVVSLGLELLGVEYLPAPGGATLRLYIDVP
                     LAEQPERIINVDDCERVSREVSAQMDVEDPISGNYTLEVSSPGVDRPLFNLEQFGRHL
                     GEMAKVTLKLPQDNRRRLQGRIEATDEAADTITFVVDKTEVVVSADNIDKARIMPDWV
                     ALGLAPSKPTGPAPKRPKPNKNSSSNEPAAKKPRAE"
     gene            840..2351
                     /gene="nusA"
                     /locus_tag="QEL58_003872"
     CDS             840..2351
                     /gene="nusA"
                     /locus_tag="QEL58_003872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusA"
                     /protein_id="HDS1678298.1"
                     /translation="MSKELLLVVDAVANEKGVPREVIFDAIEAALASAAKKRYPDEEV
                     LTRVVIDHKDGSYETYRRWEVVADDVVMESPDRQIRLMDAVDEAEGVDVGDYIEEQIE
                     NPDFGRIAAQAAKQVIVQRVREAERQQVVDAWKDRVGELITGVVKRAERGNIYVDLGG
                     NAEGFIPKDKGIPRDVLRAGDRVRGYLAEVRSEPRGPQLFISRAAPEFMIELFKLEVP
                     EVGQGLVEIKACARDPGDRAKIAVLAHDQRTDPIGACIGMRGSRVQAVSNELNGERVD
                     IVLWNDNPANFVINAMAPAEVQSIIVDEDKHSMDLAVAEDRLAQAIGKGGQNVRLASR
                     LTGWQLNVMTQDQVTAKSEAEQASARQLFMDKLEVDEEIAGILVSEGFGTVEEIAYVP
                     VGELLAVEGFDEDIVEELRARARDALLNEALAVEEGLEDGQPAQDLLSLKGMDEATAY
                     ALAGHGVRTSEDLSDLAADEVMDFGIEGLDQARAAALILAARAEEIARLERGE"
     gene            2444..>2988
                     /locus_tag="QEL58_003873"
     CDS             2444..>2988
                     /locus_tag="QEL58_003873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017159225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-2 associated
                     domain-containing protein"
                     /protein_id="HDS1678299.1"
                     /translation="MSQQTTIRKLAELVNTPVEKLLEQLAGAGMKFSGPDQVVTSSEK
                     VKLLGFLRRSHGKPEQAPEETDQSAKKITLNRRKQQEVTVSSGRSKTTVNVEVRQKRT
                     YVKDGARAMTPDEERADILRKLEESRARNLAEQQALAEKDRLRDEAIVRAREEEVAAK
                     ERAEAEKKAAEEAAAAAKAAEA"
BASE COUNT          608 a          948 c         1005 g          427 t
ORIGIN      
        1 ccttgcacca gtgcggtgca gccgctatca tcagcggcct agcagtaccc ctgaaggcgg
       61 cctcccagcg ggagtccgga tccggaagga gggccgcaac cggcaggcac tgcaggttgc
      121 aaccggaatc cagtcaccgg agtctttccg gaaaaggggc ccagcgggcc ctttgtcgtt
      181 tccggggcgt catgtttcca cgctggccaa ggccggcacc caaccataga gatcaaggca
      241 ggctgtgagc gacaaggcaa ccgacatcgc gaatctgctc gccccgaccg ttgtgtcgct
      301 gggcctggag ctgctgggcg ttgagtatct gccggccccc ggcggtgcga ccctgcgcct
      361 ttacatcgac gtgccgctgg ctgaacagcc cgagcgcatc atcaatgtcg acgactgcga
      421 gcgcgtcagc cgcgaagtgt cggcgcagat ggacgtcgaa gacccgatca gcggcaacta
      481 cacgctggaa gtgtcttcgc cgggcgtgga ccgtccgttg ttcaacctgg agcagttcgg
      541 ccgtcacctc ggcgaaatgg ccaaggtcac cctgaagctg ccgcaggaca accgtcgtcg
      601 cctgcagggc cgcatcgaag caaccgacga ggccgcggac accatcacct tcgttgtcga
      661 caagaccgaa gtggtcgtgt cggccgacaa catcgacaag gcacggatca tgcccgactg
      721 ggtggcgctg gggctggccc cgagcaagcc gaccggtccg gcaccgaagc gtccgaagcc
      781 gaacaagaat tcttcttcca acgagccggc ggcaaagaag ccgcgcgcgg agtgagccaa
      841 tgagcaagga actgttgctg gtagtggacg cagtcgccaa cgagaagggc gtgccgcgtg
      901 aagtgatctt cgatgccatc gaggccgccc tggcctcggc ggcgaagaag cgctatcccg
      961 acgaggaagt gctgacccgc gtggtcatcg accacaagga tggcagctac gaaacctacc
     1021 gccgctggga agtggtggcc gatgacgtgg tgatggaatc gccggatcgc cagatccgcc
     1081 tgatggacgc cgtcgatgaa gccgagggcg tggacgtcgg cgactacatc gaagagcaga
     1141 tcgagaaccc ggacttcggc cgcatcgccg cccaggccgc caagcaggtc atcgtccagc
     1201 gcgtgcgcga agccgagcgc cagcaggtcg tggatgcatg gaaggatcgc gtcggcgaac
     1261 tgatcaccgg tgtggtcaag cgcgccgagc gcggcaacat ctatgtcgac ctcggtggca
     1321 acgccgaagg cttcattccg aaggacaagg gcattccgcg cgacgtgctg cgcgccggtg
     1381 accgcgtgcg cggctacctg gccgaagtgc gctcggagcc gcgtggcccg cagctgttca
     1441 tcagccgtgc cgccccggaa ttcatgatcg agctgttcaa gctggaagtg ccggaagtcg
     1501 gccagggcct ggtggaaatc aaggcctgtg cccgcgatcc gggcgaccgc gccaagatcg
     1561 ccgtgctcgc ccacgaccag cgcaccgatc cgatcggcgc ctgcatcggc atgcgcggtt
     1621 cgcgcgtgca ggccgtgtcc aacgagctca atggcgagcg cgtggacatc gtgctgtgga
     1681 acgacaaccc ggccaacttc gtcatcaacg cgatggcacc ggccgaagtg cagtcgatca
     1741 tcgtcgatga agacaagcac tcgatggacc tggccgtggc tgaagaccgc ctggcccagg
     1801 cgatcggcaa gggcggccag aacgtgcgcc tggccagccg cctgacgggc tggcagctca
     1861 acgtgatgac ccaggaccag gtcaccgcca agtcggaggc cgagcaggct tcggcccgcc
     1921 agctgttcat ggacaagctg gaagtggacg aagagatcgc cggcatcctg gtcagcgaag
     1981 gcttcggcac cgtcgaggaa atcgcttatg tcccggtcgg cgaactgctg gccgtggaag
     2041 gtttcgacga ggacatcgtc gaagagctgc gcgctcgtgc ccgcgatgcg ctgctcaatg
     2101 aggccctggc agtcgaggaa ggccttgaag acggccagcc ggcgcaggac ctgctgtccc
     2161 tgaagggcat ggacgaagcc accgcgtatg cgctggccgg ccacggcgtg cgtaccagcg
     2221 aggacctgtc cgacctggcc gccgacgagg tcatggactt cggcatcgaa ggactggatc
     2281 aggcgcgcgc cgctgcgctg atcctggccg cccgcgccga agagatcgcc cgactggaac
     2341 gcggcgaatg agccggcaat gaacagggcc ctgagccgct cagggcgtag aatccgcgcc
     2401 acctccagat gcgggggggc gcccacaaga tcataggatc cgaatgtcgc agcaaaccac
     2461 catccgcaag cttgccgaac tggtcaacac gccggtcgaa aaactgctgg aacagctggc
     2521 cggtgccggc atgaagttca gcggtcccga ccaggtcgtg accagctccg agaaggtgaa
     2581 gctcctgggc ttccttcgtc gttcgcacgg caagcccgag caggccccgg aagagaccga
     2641 tcagtctgca aagaagatca cgctcaaccg ccggaagcag caggaagtga cggtcagttc
     2701 cggtcgcagc aagacgaccg tgaatgtcga ggtgcgccag aagcgtacct acgtcaagga
     2761 tggtgctcgc gccatgacgc cggacgaaga gcgcgccgac atcctgcgca agctggaaga
     2821 gtcgcgcgcg cgcaaccttg ccgaacagca ggccctggcc gagaaggatc gtctgcgcga
     2881 cgaagccatc gtccgtgccc gtgaggaaga agttgccgcc aaggagcgcg ccgaggccga
     2941 gaagaaggct gccgaagaag ctgcggccgc cgccaaggct gccgaggc
//
LOCUS       DAOKIP010000322         2984 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.329,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000322 DAOKIP010000000
VERSION     DAOKIP010000322.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 2984)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2984)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2984
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.329"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(315..947)
                     /locus_tag="QEL58_003874"
     CDS             complement(315..947)
                     /locus_tag="QEL58_003874"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012512403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcF family protein"
                     /protein_id="HDS1678300.1"
                     /translation="MSRDRQRHRTGLLGWLWRLFVVLVIWVLGVTAWIVWVGERDQAA
                     KADAIIVLGAAAYDAKPSPVFEERIRHGLDLYEAQYAPLLIFTGGYGGTGARFSESQV
                     ARRYALKHGVPDDAILIETASRNTVQNLVEAKRLMDQRNLHRVIIVSDPLHMARALRL
                     SKALGIDALASSTPSTRFRSFHTSWRFLVQEIYFFHRDLVRPPLSSPANT"
     gene            complement(944..1906)
                     /locus_tag="QEL58_003875"
     CDS             complement(944..1906)
                     /locus_tag="QEL58_003875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal-phosphate dependent enzyme"
                     /protein_id="HDS1678301.1"
                     /translation="MSDSLLPRADDVLLAAARIAPHASVTPVLRSRTLDAMAGAQLAF
                     KAEHLQRGGAFKFRGACNAVWSLDADRARAGVVTHSSGNHGAALALAARTRGIPCHVV
                     VPEGAVAAKLANIARHGATLWRCPPTIADREATCAKVQADTGATLVHPYADPAVMAGQ
                     GTAALELLHSDGPFDVLVVPVGGGGLASGTALALQHASPQTRLVLAEPAGADDTARSL
                     AAGERQAAFTPDTICDGLRTLIGAPNFELLRAAGAEVIVVDDAATLAAMRLLWDVLKQ
                     VVEPSSATVLAAVLAQPQRFAGLRVGLVLSGGNVDLPALRWGTP"
     gene            2066..2557
                     /locus_tag="QEL58_003876"
     CDS             2066..2557
                     /locus_tag="QEL58_003876"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1678302.1"
                     /translation="MKMRLMLAGGLMLALTGCATYDYVGGGRGGGYYHGAPSVEYRYP
                     AGYPYNYGYPYYGGYGGYYGGYGNPYYSRPIYRPPHNHRPPPRPPGNGGENRPPPPSR
                     PSYNGGSPWRNMDSMRRPPQSSVQPSAPAPPARPAPAPSAPRMNGSPWRNMDRATQRT
                     VER"
BASE COUNT          517 a         1061 c          963 g          443 t
ORIGIN      
        1 gcgcactgct ctggtaggtg ccaacgttgg ttggcacaac ccatcagatc gcggtgccgc
       61 cagccgtgtg ccgaccaagg tcggcaccta ccgattcatg catgcgcact gctctggtag
      121 gtgccaacgt tggttggcac aacccgtcag atcgcggtgc cgccggccgg gtgccgacca
      181 aggtcggcac ctaccgattc atgcacgcgc actgctccgg taggtgccaa ccttggttgg
      241 cacaacccat cagatcgcgg tgccgccagc cgtgtgccga ccaaggtcgg cacccaccag
      301 aagcaggcag ccgctcaggt attggccggc gaactcagcg gcgggcgcac caggtcgcgg
      361 tggaagaaat agatctcctg caccaggaaa cgccagctgg tatggaagct gcggaagcgc
      421 gtgctgggcg tggacgaggc cagtgcatcg atacccagcg ccttgctcag gcgcagcgcg
      481 cgcgccatgt gcagcgggtc actgacgatg atcacccggt gcaggttgcg ctgatccatc
      541 aaccgcttgg cttcgaccag gttctgcacg gtgttgcgcg aggcggtctc gatcaggatc
      601 gcgtcgtccg gcaccccgtg cttgagcgca taacgccgcg ccacctgcga ttcggaaaag
      661 cgcgcgccgg tgccgccata gccaccagtg aagatcagca gtggcgcgta ctgggcctca
      721 tagagatcca ggccatggcg gatgcgttct tcgaacaccg gcgacggctt ggcgtcatag
      781 gccgctgcac cgagcacgat gatggcatcg gccttggccg cctggtcacg ctcacccacc
      841 cagacgatcc aggccgtcac acccagcacc cagatcacca gcaccacgaa cagccgccac
      901 aaccagccca gcaggccggt gcggtgccgc tgccggtcac ggctcaaggc gtcccccagc
      961 gcagcgctgg caggtcgaca ttgccgccgg acaacaccag gcccacgcgc agcccggcaa
     1021 accgctgcgg ctgcgccagc accgcggcca gcacggtcgc cgaggaaggc tcgaccacct
     1081 gctttagcac gtcccacagc aggcgcatcg ccgccagcgt ggccgcgtca tcgaccacga
     1141 tcacttccgc acccgccgcg cgcagcagct cgaagttggg cgcgccgatc agggtgcgca
     1201 ggccatcgca gatcgtgtcc ggggtgaaag ccgcctggcg ctcgcctgcg gccagcgagc
     1261 gtgcggtgtc atcggcgccg gccggttcgg ccagcaccag ccgggtctgc gggctggcat
     1321 gctgcagcgc cagcgcggta ccgctggcca ggccaccgcc gcccaccggt accaccagca
     1381 catcgaacgg gccatcgctg tgcagcagtt ccagggccgc ggtgccctgc cccgccatca
     1441 ctgccggatc tgcatagggg tggaccaggg ttgcgccggt atcggcctgc accttggcgc
     1501 aggtggcctc acggtcggcg atggtcggcg ggcagcgcca gagcgtggca ccgtgccggg
     1561 cgatgttggc cagcttggcc gccaccgcac cttcgggcac caccacgtgg cagggaatgc
     1621 cgcgggtgcg cgcggccagg gccagcgcgg cgccatgatt gccggaggaa tgggtgacca
     1681 cgccggcacg ggcgcgatcg gcatcgagcg accacaccgc gttgcaggca ccacggaact
     1741 tgaatgcgcc gccgcgctgc aggtgttcgg ccttgaacgc cagctgcgcc ccggccatcg
     1801 catcaagcgt gcgcgagcgc agcaccgggg tcacgctggc atgcggggcg atcctcgcgg
     1861 cagcaagcag gacatcgtcg gcgcggggca acagtgaatc gctcatgacg caagattaac
     1921 gtatgccccc tcgctggcga ccggggcaca cgtcatgcca gcatgcagcc cttcacctcc
     1981 attcatcctg gccagcggaa ttaagggccg attcaatgcc cgcgcacgaa gctgactgca
     2041 cacccgtcct ctggggggac ccaccatgaa aatgcgcttg atgcttgccg gtggcctgat
     2101 gctggccctg accggctgcg ccacctacga ctatgtcggc ggtggccgcg gcggcggcta
     2161 ctaccacggt gcgccgtcgg tggagtaccg ctacccggcc ggctatccct acaactatgg
     2221 ttacccgtac tacggcggct acggcggcta ttacggcggc tatggcaatc cgtactactc
     2281 gcggccgatc taccggccgc cgcacaacca tcggccgccg ccgcgcccgc ctggcaacgg
     2341 tggcgagaac cgcccgccgc cgccgtcgcg tccgtcgtac aacggtggct cgccgtggcg
     2401 gaacatggac tcgatgcgtc gcccgccgca gtccagcgtg cagccgtcgg cgcccgcgcc
     2461 gccggcccgg ccagccccgg cgccgagcgc gccgaggatg aacggctccc cttggcgcaa
     2521 catggatcgt gcgacgcagc gcacagttga gcgctgaacc atcttgcatt tcacacggtc
     2581 caagccgcac tctacgcggg cagtgacgga ccgcgtcaca atgtgacaaa aacgacacgg
     2641 gccgccgcaa aaagctctac gtcgatatcc gacaggaaca tctggatccc ccctgttccg
     2701 gccctgtcgg atgtcggcac ctctgaaggc agacggcccc gcaatgcggg gccgtctgtt
     2761 ttggggaggg gaggcatccg tagatccacg ccatgcgtgg atggagcttt cccggcagcc
     2821 gcaaaaaaac agggccggac agtcccccga ctgccggccc cctgcttccc caccgtgcgc
     2881 ctgtaccggc ccctgttcca attccggtca ccggcgcctg cggcgccagc cacggtgggt
     2941 gctattgggt tatctgcaaa aatcctgcca actttagggc tgat
//
LOCUS       DAOKIP010000323         2979 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.330,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000323 DAOKIP010000000
VERSION     DAOKIP010000323.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 2979)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2979)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2979
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.330"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(95..1504)
                     /gene="mdtD"
                     /locus_tag="QEL58_003877"
     CDS             complement(95..1504)
                     /gene="mdtD"
                     /locus_tag="QEL58_003877"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012511849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug transporter subunit MdtD"
                     /protein_id="HDS1678303.1"
                     /translation="MSTSPSNYTRHRPLLWLVSLAIFMQMLDSTIVNTALPAMAASLG
                     ESPLQMQSVVFSYALAVATFIPASGWIADRYGTRRTFLVAIILFTLGSLACALAQHLH
                     QLVGARVLQGIGGAMLLPVGRLAVMRSVSREDFLRAMSFIAIPALVGPLIGPTLGGWL
                     VEIASWHWVFLINLPIGVIGFIAAMKIMPDHYASHRTRFDLRGYVMLAFAMVVLSLAL
                     DGISGLGTPHALVMLMTVAGLAALVGYWLHAANSTAPLFSLALFRVPSYRIGILGNLF
                     SRIGSSAMPMLIPLLLQVGLGLGPMNAGLMMVPVAAAGMVSKKLAVKLVERYGYRRVL
                     MVNTVLVGLAMASFILMTPGQHLAWRLLQLAFFGAVNSLQFTVMNTVTLRDLDREFAS
                     SGNSLLSMVMMLAAGFGAAAAGSLLAAFGTHLDSNSATAALHATFLCVGAITLTSTMI
                     FWQLPDTKPEPRQVEHVAE"
     gene            complement(1597..2679)
                     /locus_tag="QEL58_003878"
     CDS             complement(1597..2679)
                     /locus_tag="QEL58_003878"
                     /EC_number="4.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014038142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen decarboxylase"
                     /protein_id="HDS1678304.1"
                     /translation="MPIVTSPLRNDRLLRALRREPVDCTPVWLMRQAGRYLPEYRATR
                     AKAGSFLAMAKTPEIACEVTLQPLRRFPLDAAILFSDILTIPDAMGLELYFVEGEGPK
                     FRHPVRDEAAIARLAVPDMEQDLGYVMDAVRLIRRELDGQVPLIGFSGSPWTLACYMV
                     EGGGSKDFARIKAMALNHPQALHRLLEVTTEAVIAYLGAQRTAGAQALQVFDTWGGVL
                     SPAMYREFSLRYLQRIAQGLDRGEGNERTPLILFGKGTGLHLEALSQTGADALGLDWT
                     LDLDEALRRTGGRVALQGNLDPTTLYASPDAIAAAAARVLDTYAAGNGGSREGHVFNL
                     GHGMSPDMDPAHVQVLVDAVHAHSQR"
     gene            complement(2706..2945)
                     /locus_tag="QEL58_003879"
     CDS             complement(2706..2945)
                     /locus_tag="QEL58_003879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="WGR domain-containing protein"
                     /protein_id="HDS1678305.1"
                     /translation="MHVYLQHPDAGAQAPRFLRLSLQPDLFGGWELLRESGRVGGRSQ
                     LRRELFLQADEARHAFEKARDAELHRGFQILSHGD"
BASE COUNT          518 a          992 c         1040 g          429 t
ORIGIN      
        1 gacaccgccc caccacccca cggaatgctg ctttggcttt ggccgttgcc gttgcttgca
       61 gccggtgcag ggccgcaggc cctgccgccc cccctcactc cgctacgtgc tcgacctgtc
      121 gtggctccgg cttggtgtcc ggcaactgcc agaagatcat cgtcgacgtc agcgtgatcg
      181 cacccacgca caggaacgtg gcatgcagcg cagcggtggc actgttgctg tccaggtggg
      241 taccgaacgc agccagcagg ctgcccgccg ccgcggcacc gaaaccggcg gcgagcatca
      301 tcaccatcga cagcaggctg ttgccggagc tggcgaactc gcggtcgaga tcgcgcaggg
      361 tcacggtgtt catcacggtg aactgcagcg aattgaccgc accgaagaac gccagctgca
      421 gcaggcgcca cgccaggtgc tggcccggtg tcatcaggat gaagctggcc atcgccagcc
      481 ccaccagcac ggtgttgacc atcaacacgc ggcggtagcc gtagcgctcg accagcttca
      541 ccgccagctt cttcgacacc atgccggccg cagcgacggg caccatcatc aggccggcgt
      601 tcattgggcc caggcccagg ccgacctgca gcagcagcgg gatcagcatc ggcatggcac
      661 tgctgccgat gcgcgagaac aggttgccaa ggatgccgat gcggtagctg ggcacgcgga
      721 acagtgccag cgagaacaac ggcgcggtgg agttggccgc gtgcagccag tagcccacca
      781 gcgctgccag gccggcaacg gtcatcagca tcaccagcgc gtgcggcgtg ccgaggccgg
      841 agatgccgtc cagtgccagc gacaacacca ccatcgcaaa ggccagcatg acgtagccgc
      901 gcaggtcgaa gcgggtgcga tggctggcgt agtggtcggg catgatcttc atcgcggcga
      961 tgaaaccgat cacgccgatc ggcaggttga tcaggaacac ccagtgccag gatgcgatct
     1021 cgaccagcca gccgcccagc gtcgggccga tcaacgggcc gaccagggcc ggaatggcga
     1081 tgaagctcat cgcgcgcagg aaatcctcgc gcgacaccga acgcatcacc gccagccgac
     1141 cgaccggcaa cagcatcgcg ccgccgatgc cctgcagcac gcgcgcaccg accagctggt
     1201 gcaggtgctg ggccagcgcg caggccagcg aaccgagagt gaacaggatg atcgccacca
     1261 ggaaggtgcg ccgcgtgccg tagcggtcgg cgatccagcc ggaggcagga atgaaggtgg
     1321 cgaccgccag cgcgtagctg aacaccaccg actgcatctg cagcgggctc tcgcccaggc
     1381 tggccgccat cgccggcaag gccgtgttga cgatggtcga atccagcatc tgcatgaaga
     1441 tcgccagcga caccagccac agcagggggc ggtggcgggt gtagttcgat ggcgatgtgg
     1501 acatggcgtg cggccggtgc agcgtggggg atgccatgat cgcgcaatgc gggtcacggc
     1561 gcgatcaaca tcgcgccgtg gttgcctgcg caatgctcag cgctggctgt gcgcgtgcac
     1621 cgcgtcgacc agtacctgca cgtgtgccgg gtccatgtcc ggtgacatgc cgtggccgag
     1681 gttgaacacg tggccctcgc gcgaaccgcc attgccggcg gcgtaggtgt cgagcacgcg
     1741 cgcggcggcc gcggcgatgg catcgggcga ggcgtacagc gtggtcgggt cgaggttgcc
     1801 ctgcagggcg acgcgaccgc cggtgcggcg cagggcctcg tccaggtcca gcgtccagtc
     1861 caggccgagc gcatcggcgc cggtctgcga cagcgcttcc aggtgcaggc cggtgccctt
     1921 gccgaacagg atcagcgggg tacgctcgtt gccttcgcca cggtccaggc cctgggcaat
     1981 ccgctgcagg tagcgcagcg agaactcgcg gtacatcgcc ggcgacagca cgccgcccca
     2041 ggtgtcgaac acctgcagcg cctgcgcacc ggccgtgcgc tgcgcgccga ggtaggcgat
     2101 caccgcctcg gtggtcactt ccagcaggcg gtgcagggcc tgcgggtggt tcagcgccat
     2161 cgccttgatg cgcgcgaagt ccttgctgcc gccgccttcc accatgtagc aggccagtgt
     2221 ccacgggctg ccggagaagc cgatcagcgg cacctggccg tccagctcgc ggcggatcag
     2281 acgcaccgcg tccatcacat agcccaggtc ctgttccatg tccggcactg ccagcctggc
     2341 gatggcggct tcatcgcgca ccgggtggcg gaatttcggg ccttcgcctt cgacgaagta
     2401 cagctccagg cccatcgcat cgggaatggt gaggatgtcc gagaacagga tggccgcgtc
     2461 cagcgggaag cggcgcagcg gctgcagggt gacttcgcag gcgatctccg gggtcttggc
     2521 catggccagg aagctgccgg ccttggcccg ggtcgcacgg tattccggca ggtagcggcc
     2581 ggcctggcgc atcaaccaga cgggggtgca gtccaccggt tcgcggcgca gggcgcgcag
     2641 caggcgatcg ttgcggagag ggctggtcac gatgggcatt ccttgggcga aagttggcag
     2701 cggcgtcagt cgccgtgcga aaggatctgg aagccgcgat gcagttcggc atcacgggcc
     2761 ttctcgaagg catggcgtgc ttcatcggcc tgcaggaaca gctcgcgccg cagctgcgag
     2821 cggccaccga cgcgaccgct ctcgcgcagc agttcccaac cgccgaacag gtccggctgc
     2881 aggctcaggc gcaggaagcg cggcgcctgg gcaccggcat cgggatgttg caggtagacg
     2941 tgcatggcgc tgattgtagc ggggcacggg tgacccctg
//
LOCUS       DAOKIP010000324         2952 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.331,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000324 DAOKIP010000000
VERSION     DAOKIP010000324.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 2952)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2952)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2952
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.331"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            46..732
                     /gene="ftsE"
                     /locus_tag="QEL58_003880"
     CDS             46..732
                     /gene="ftsE"
                     /locus_tag="QEL58_003880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003484499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division ATP-binding protein FtsE"
                     /protein_id="HDS1678306.1"
                     /translation="MSVLRFDNVSKQYAGGHEALIDVSFEVAPGEMLFVTGHSGAGKS
                     TLLKLIHLDERPSRGAVVFDERNLLKVRGGDVPRHRRAVGAVYQDHRLLMDRSIAENV
                     ALPLILRGTRRGDISKRVRSVLERMGLGHREKALPSQLSAGEQQRVGIARAIVGEPKL
                     LVADEPTGNLDPTLAAEIMALFAELPSRGTSVLVVSHDLPLLRRMRKRVLILDHGRLA
                     DDISPQDLAE"
     gene            736..1683
                     /locus_tag="QEL58_003881"
     CDS             736..1683
                     /locus_tag="QEL58_003881"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003484495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDS1678307.1"
                     /translation="MAKNENSEAAAPSRVGVWFQHHVHSVVFSLGRACRKPWATLLTV
                     MVMALALALPLGLSIALDNLKQFAGSVQQSRDINVFLKGNVDGPGALRLAGQLRDRDD
                     VAEVNVRTPEQGLQELRDAGLGEAIDALNDNPLPSLLVITPGQGKDDARLARALESLP
                     EADLVQHDALWRQRLDAWLAFGARLVQVLSVLLGAGAALVVGNTVRLDIQARREEIGV
                     LQLLGASDGFIRRPFLYLGAWYGLGAGAVALALIAAAGAALRMPLAELSRSYGSPFVL
                     HGLDLLHGGLVLLGTLLLGWLGAWLVTGHFLRQTRPTDT"
     gene            1691..2533
                     /locus_tag="QEL58_003882"
     CDS             1691..2533
                     /locus_tag="QEL58_003882"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019338974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HDS1678308.1"
                     /translation="MQPQALKHLDGPATRVMVVDGSKLVRKLIADVLTRELPGVEVIG
                     CDSIEDAQQALAQGPVDLVTTSLTLRDGDGLALARMVRDAVGQAYVPVIVVSGDAQQH
                     LEQRRFTEYVTDYFDKSLGHEALATFIRGYVQPQTIPGATILYIEDSRVVAEATKRML
                     ERQQLNVLHVVSAEEAFTLLTAESLGRSRHRIDLVLTDVTLKGELSGRDVVQRVRVDF
                     GYGKRRLPVLVMTGDGNPHNQTGLLQSGANDLVLKPIEERLLVTKVLFQLRLARLNDG
                     PLIR"
     gene            2530..>2952
                     /locus_tag="QEL58_003883"
     CDS             2530..>2952
                     /locus_tag="QEL58_003883"
                     /EC_number="3.2.2.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012512285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HDS1678309.1"
                     /translation="MMDEVADTPTIQLEPSWKQHVGDYLLQPQMRELSSFLRQRKASG
                     AAVFPPGPQIFAAFDATPFEQVKVVILGQDPYHGRGQAHGLSFSVPTGVPVPPSLLNI
                     YKEIESDLGIPRPDHGCLIPWAQRGVLLLNAVLTVEEGK"
BASE COUNT          452 a          991 c         1033 g          476 t
ORIGIN      
        1 tgtggccatc tccacgtcgt cgcgccgctc ctgcataatc ggggcatgag tgtcctgcgc
       61 ttcgacaatg tcagcaaaca gtacgccggt ggccacgagg cgctgatcga tgtcagcttc
      121 gaggtcgcgc cgggcgagat gctgttcgtc accggccatt ccggtgcggg caagagcacc
      181 ctgctcaagt tgatccacct cgacgagcgg cccagccgtg gcgcggtggt gttcgacgag
      241 cgcaacctgc tgaaggtgcg tggcggcgat gtgccgcgcc accgacgcgc ggtgggggcg
      301 gtctaccagg accatcgcct gctgatggac cgctcgatcg ccgagaacgt ggcgctgccg
      361 ctgatcctgc gcggtacccg ccgcggcgac atcagcaagc gcgtgcgctc ggtgctcgaa
      421 cggatgggcc tgggccatcg cgagaaggcg ctgccctcgc agctgtcggc cggcgagcag
      481 cagcgagtcg gcatcgcccg cgccatcgtc ggcgagccca aactgctggt ggctgatgag
      541 ccgaccggca acctcgaccc gaccctggcg gcggagatca tggccctgtt cgccgagctg
      601 ccctcgcgcg gcaccagcgt gctggtggtc agccatgacc tgccgctgct gcgtcgcatg
      661 cgcaagcgtg tgctgatcct cgaccacggc cggctggcgg acgacatctc gccgcaggac
      721 ctggcggagt aacgcatggc gaagaacgaa aacagcgaag ccgccgcccc ctcgcgggtg
      781 ggcgtctggt tccagcacca cgtgcacagc gtggtgttca gcctgggccg cgcctgccgc
      841 aagccgtggg cgacgctgct gacggtgatg gtcatggcgc tggcgctggc cctgccactg
      901 ggcctgtcga tcgcgctgga caacctcaag cagttcgccg gcagcgtgca gcagtcgcgc
      961 gatatcaatg tgttcctgaa gggcaatgtc gatggccccg gcgcgctgcg cctggccggc
     1021 cagctgcgcg accgcgacga cgtcgccgaa gtgaacgtgc gcacgcccga acagggcctg
     1081 caggaactgc gcgatgctgg cctgggcgag gcgatcgacg cgctcaacga caacccgctg
     1141 ccctcgctgc tggtgatcac cccgggccag ggcaaggacg atgcgcgcct ggcacgtgcg
     1201 ctggaaagcc tgcccgaggc cgacctggtg cagcacgatg cgctgtggcg ccagcgcctg
     1261 gatgcctggc tggcgttcgg ggcacggctg gtacaggtgc tgtcggtgct gctcggcgcc
     1321 ggcgccgcgc tggtggtcgg caacaccgtg cgcctggata tccaggcccg ccgcgaagag
     1381 atcggcgtgc tgcagttgct tggtgccagc gacggcttca tccgccgtcc gttcctgtac
     1441 ctgggcgcct ggtacggcct cggtgccggt gcggtggcgc tggccctgat cgccgccgcc
     1501 ggcgccgcac tgcgcatgcc gctggccgaa ctctcgcgca gctacggcag cccgttcgtg
     1561 ctgcatggcc tggacctgct gcatgggggc ctggtcctgc tcggcacgct gctgctgggc
     1621 tggctggggg cctggctggt caccggccac ttcctccgcc agacccgtcc gaccgacacc
     1681 tgagaccggc atgcaaccgc aagcgctgaa gcaccttgat gggcccgcga cgcgggtgat
     1741 ggtggtcgat ggctcgaagc tggtgcgcaa gctgattgcc gacgtcctga cccgtgagct
     1801 gccgggcgtg gaggtgatcg gctgcgacag cattgaggat gcacagcagg cgctggcgca
     1861 gggcccggtg gacctggtga ccacgtcgct gaccctgcgc gacggggatg gcctggcgct
     1921 ggcgcggatg gtccgcgacg ccgtgggcca ggcctatgtg ccggtgatcg tggtgtccgg
     1981 tgatgcccag cagcacctgg agcagcgccg cttcaccgaa tacgtcaccg actatttcga
     2041 caaatcgctc ggccacgagg cgctggcgac cttcatccgc ggctacgtgc agccgcagac
     2101 cattcccggc gcgaccatcc tctacatcga ggacagccgc gtggtggccg aggccaccaa
     2161 gcgcatgctc gaacgccagc agttgaacgt gctgcacgtg gtcagcgcgg aagaggcgtt
     2221 caccctgctc accgccgagt cgctgggccg cagccgccac cgcatcgacc tggtgctgac
     2281 cgacgtcacc ctgaagggtg aactgagcgg ccgcgacgtg gtgcagcgtg tgcgcgtgga
     2341 cttcggctac ggcaagcgcc gcctgccggt gctggtgatg accggcgacg gcaatcccca
     2401 caaccagacc gggctgctgc agtccggcgc caacgacctg gtgctcaagc cgatcgaaga
     2461 acggctgctg gttaccaagg tgctgttcca gctgcggctg gcccgattga acgatggacc
     2521 cctgattcga tgatggatga agtagccgac accccgacga tccagctgga accgagctgg
     2581 aagcagcacg tcggtgatta cctgctgcaa ccgcagatgc gcgagctgtc cagcttcctg
     2641 cgccagcgca aggcgagtgg tgccgcggta ttcccgcccg gcccgcagat cttcgctgcg
     2701 ttcgacgcca cgccgttcga gcaggtgaag gtggtcatcc tcggccagga cccgtatcac
     2761 ggccgtggcc aggcccatgg cctgagtttc tcggtgccga cgggcgtgcc ggtgccgccg
     2821 tcgctgctga acatctacaa ggagatcgag agcgatctcg gtatcccgcg tccggaccac
     2881 ggctgcctga tcccgtgggc gcagcgcggc gtgttgctgc tcaatgcggt gctgaccgtg
     2941 gaagagggca ag
//
LOCUS       DAOKIP010000325         2907 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.332,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000325 DAOKIP010000000
VERSION     DAOKIP010000325.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 2907)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2907)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2907
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.332"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..571)
                     /locus_tag="QEL58_003884"
     CDS             complement(<1..571)
                     /locus_tag="QEL58_003884"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004140776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HDS1678310.1"
                     /translation="MILDLVRHAGNGRDEFLDGRTDPPQLATLPQELVDAYAAQPWER
                     VISSPRLRSLHTAMALATARGLDVEPDEEWEELDFGDWDGQSLFDLPEDALAAFHADP
                     HAYPPPNGESWGHFERRIARALDRLLDDDDPLPTLVVSHGGPLRMVLSQVCGLPMSLC
                     WALRIDHGTRLRVRLERGEAGLVGELLELQ"
     regulatory      713..936
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00174"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="cobalamin riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="adenosylcobalamin"
                     /db_xref="RFAM:RF00174"
     gene            1051..2895
                     /gene="btuB"
                     /locus_tag="QEL58_003885"
     CDS             1051..2895
                     /gene="btuB"
                     /locus_tag="QEL58_003885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012509945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent vitamin B12 receptor"
                     /protein_id="HDS1678311.1"
                     /translation="MKLQSRMLSLAVLAALPALAQAADDTTALDQVLVTATRTPIALQ
                     DSIAPAQVIDRAQIESSQATSLQELLRGRAGINLTNAGGLGKQSSLFLRGTNSGHTVV
                     LVDGVRINSADLGLAMYQDLPLAQIERVEIVRGPQSSLYGADAIGGVIQIFTRRNAGD
                     FAPHFQLGGGSNGLREASGGIGGGTERGWFGADIAYQHSDGIDACRGSSSVFTAGCFA
                     DEHDRDGYRNLSKSLRGGYTFNDQWNVEGSALRADGRNHYDGYYNYSETRQQVLAGKV
                     RYTPSERVAFTANVGRSDNESDNYGAPGVFGSAQTHRDSASLQGDFGLAEGQLLSAGV
                     DWSEDNLDGSSAGYLVDSRRNTGVFVQYQGRFGRHQLQASARNDDNQQFGNHATGSLG
                     WAMQLEHGLRVNASYGTAFKAPTFSDLYDPWSGVPTLKPEKSKSANLGVSQQGQGWHW
                     GLDVYETRIDDLITYDALTMKMQQVEKARIRGAELTGGVLLAGFDINAQLSYTDPRNR
                     TRGSTQFDNWLPRRAQQTARLDIDRRFGDVRAGLTVQGAGKRYDNAGNSVKVGGYGTL
                     DLRAEYALTPSWSLLARAANVFDRRYETVAWYNQPGREYQLSVRYQPK"
BASE COUNT          521 a         1020 c          948 g          418 t
ORIGIN      
        1 gctgcagttc cagcagttcg cccaccagac ctgcttcacc gcgttccagc cgtacccgca
       61 ggcgcgtgcc atggtcgatg cgcagcgccc agcacagcga catcggcagg ccgcacacct
      121 gcgacagcac catgcgcagc gggccaccgt ggctgaccac cagtgtcggc agcgggtcat
      181 cgtcatcaag caggcgatcc agcgcgcgtg caatgcgccg ctcgaagtgg ccccagctct
      241 caccattcgg cggcggatac gcatgcgggt cggcatggaa cgccgccagc gcgtcttccg
      301 gcagatcgaa cagggactgc ccgtcccaat caccgaaatc cagttcttcc cactcttcgt
      361 ccggctccac atccaggccg cgtgcagtgg ccagcgccat cgccgtatgc agcgagcgca
      421 gccgcggcga actgatcacc cgctcccacg gctgtgcggc gtaggcgtcg accagttcct
      481 gtggcagcgt cgccagctgc ggtggatcgg tgcggccatc gaggaactca tcgcgaccgt
      541 tgccggcatg gcggaccagg tcgaggatca tgcgtgcgcc ccgtacaggc aacgcgggaa
      601 cagcggaaaa cgggcggaca tcggcaacgg caccacggga tcgagggacc attctaaggg
      661 cacagcaaag gcagtcgagc aagctcgacc ctacggctgc cggggatggc gtagactgcg
      721 cgcacttcca ggtgacctgc ggccttggcc ggcaggttga aacgggaagc cggtgacgcg
      781 tgattccacg ccaggccggc gctgcccccg caacggtaag cacgtcagtt ccaggcaaca
      841 acgccactgt gccacgcgca tgggaaggcg cctggacggt ggcctcgcgc cacccggcgg
      901 caagcccgga gaccggcccg gaagcctcag gtcgcgatgc ggtgggcatg gcgctggatg
      961 agcacggcgt cggccgtggc atcggcgcgt gcctggcttc gcggctcctc cccttcgctg
     1021 cgcgggcgtg cgtggcacct ggagtacccc atgaagctgc agtcccgaat gctgtccctg
     1081 gccgtgctgg ccgccctgcc cgcgctggcg caggccgccg atgacaccac cgcgctcgac
     1141 caggtgctgg ttaccgccac ccgcacgccg atcgctctgc aggacagcat cgcgccggcc
     1201 caggtcatcg accgcgcgca gatcgaatcc agccaggcca cttcgctgca ggaactgctg
     1261 cgcggccgcg ccggcattaa cctgaccaac gccggcggcc ttggcaagca gagctcgctg
     1321 ttcctgcgcg gcaccaactc cggccacacc gtcgtgctgg tcgacggcgt acgcatcaac
     1381 agcgccgacc tcggcctggc catgtaccag gacctgccac tggcgcagat cgaacgcgtg
     1441 gagatcgtgc gcggaccgca gtccagcctg tatggcgccg atgccattgg tggcgtgatc
     1501 cagatcttca cccgccgcaa tgccggtgac tttgccccgc acttccagct cggcggtggc
     1561 agcaacggcc tgcgcgaggc cagcggtggc attggtggcg gcaccgaacg cggctggttt
     1621 ggcgccgaca tcgcctacca gcattccgat ggcatcgatg cctgccgcgg ctcttcctcg
     1681 gtgttcactg ccggctgctt tgccgacgaa cacgaccgcg acggctaccg caacctgtcc
     1741 aagagcctgc gtggcggcta caccttcaac gaccagtgga acgtggaagg cagcgcgctg
     1801 cgcgccgacg gcaggaacca ttacgacggc tactacaact actccgaaac ccgccagcag
     1861 gtgctggccg gcaaggtgcg ctacaccccc tccgaacgcg tggcgttcac tgccaacgtc
     1921 ggccgcagcg acaacgaatc ggacaactat ggcgcaccgg gcgtattcgg tagtgcgcag
     1981 acccaccgcg acagcgcctc gctgcagggt gatttcggcc tggccgaagg ccagctgctg
     2041 agcgccggcg tggactggag tgaagacaat ctggatggca gcagcgcggg ctacctcgtc
     2101 gacagccgtc gtaacaccgg tgtgttcgtg cagtaccagg gccgcttcgg ccgccaccag
     2161 ctgcaggcca gcgcgcgcaa cgacgacaac cagcaattcg gcaaccatgc caccggcagc
     2221 cttggctggg cgatgcagct ggagcacggc ctgcgcgtca acgccagcta cggcaccgcc
     2281 ttcaaggcac cgaccttcag cgacctgtac gacccgtgga gcggcgtgcc gacgttgaag
     2341 ccggagaagt ccaagagcgc caaccttggc gtttcacagc agggccaggg ctggcattgg
     2401 ggcctggacg tgtacgagac ccgcatcgat gacctgatca cctacgatgc gctcacgatg
     2461 aagatgcagc aggtggagaa ggcgcgcatc cgtggcgccg aactgaccgg tggcgtgctg
     2521 ctggccggct tcgatatcaa cgcgcagttg agctacaccg acccacgcaa ccgcacccgc
     2581 ggcagcaccc agttcgacaa ctggctgccg cgccgcgcgc agcagaccgc gcgcctggac
     2641 atcgaccgtc gcttcggcga cgtccgcgcc ggactgaccg tgcagggcgc gggcaagcgc
     2701 tatgacaacg ccggcaactc ggtgaaggtc ggcggctacg gcacgctgga cctgcgcgcc
     2761 gagtacgcgc tgacgccgtc gtggtcgctg ctggcgcgtg cggccaacgt gttcgaccgc
     2821 aggtacgaga ccgtggcgtg gtacaaccag cccggccgcg agtaccagct gagcgtgcgt
     2881 taccagccga aatgaccgca acggtca
//
LOCUS       DAOKIP010000326         2891 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.333,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000326 DAOKIP010000000
VERSION     DAOKIP010000326.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 2891)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2891)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2891
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.333"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..577)
                     /locus_tag="QEL58_003886"
     CDS             complement(<1..577)
                     /locus_tag="QEL58_003886"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010487098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-methyltransferase"
                     /protein_id="HDS1678312.1"
                     /translation="MLQALKDELVRFGTDNDARETERGRRMLNITPETGELLSVLVRF
                     GQARRVLEIGTSNGYSTLWLAEAAAAIDGHVTTLEFAEDKAAMARATFARSGLEQYIT
                     LVHGDAGSWLAQADDASVDLLFLDSDREQYAGWWPQLRRVLRPGGLLVVDNATSHAAQ
                     MEPLRALLAADKSFSTSLVPVGNGELLAVRNA"
     gene            complement(583..2238)
                     /gene="ubiB"
                     /locus_tag="QEL58_003887"
     CDS             complement(583..2238)
                     /gene="ubiB"
                     /locus_tag="QEL58_003887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019304665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinone biosynthesis regulatory protein
                     kinase UbiB"
                     /protein_id="HDS1678313.1"
                     /translation="MKAVLRASRIGRVILRYRLDDLLQGTPAERWLRLAKPFVPRASA
                     DIAAQSRGARLRLALQDLGPIFVKFGQILSTRRDLVPPDVANELTLLQDRVKPFDGDT
                     ARRIVEEALGLPVSEAFASFDTEPLASASIAQVHAATLADGRQVVVKVLRPGIEKQID
                     ADIALLNSLAALVERTHPRADKIRPREVVAEVENTLAAELDLQREGANASVLRRFWEN
                     SDDLYVPEVIWSHTAERALTLERVWGIPSDDIAALDKAGIDRKALAAKGVRVFYTQVF
                     RDNFFHADAHAGNIWVDTDPARRANPRFIALDFGIMGQLSQEDQYYLAENFMAIFNRD
                     YRRIAELHVQARWMPDHVRIDDLEAAVRSVCEPYFTRPLSQISLAEVLMKLFRVAQRY
                     QLTLQPQLILLQKTLLNIEGVGRQLDPQIDIWAVAKPVLAKILRERYSPRRVVREIGK
                     RLPEIMTHAPDMPRLVHAWLTQQVEGRHELAMRSRDLVALDASLQRLQKRAVGAITGV
                     GLLAIAALMYVLQPPGWYWGDLPMWSWLSGAVGAVALLRAWWK"
     gene            complement(2235..2870)
                     /locus_tag="QEL58_003888"
     CDS             complement(2235..2870)
                     /locus_tag="QEL58_003888"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010487102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCP2 sterol-binding domain-containing protein"
                     /protein_id="HDS1678314.1"
                     /translation="MALSLLKSLKPVAGRALQIALNRALALDPDTRHALASLDGRHID
                     LTLEAPSLAMRISVEGDQLRVGPVDTQEADLAVRSSLAGVLAQLPLLANARRADSTGK
                     GRVRVAGDAELARRLQQLAKGFDPDWQQPFVSVFGEVLGVQVANTLRSALQHARQGAI
                     DLAHSAAEFITEESRDVVPRAELDAFHDDVDVLRDDVERLGARVQRLRGAA"
BASE COUNT          453 a          996 c          988 g          454 t
ORIGIN      
        1 aggcgttgcg cacggccagc agttcgccgt tgcccaccgg caccaggctg gtgctgaagc
       61 tcttgtcggc cgccagcagc gcacgcagcg gttccatctg cgcggcgtgc gaagtggcgt
      121 tgtccaccac cagcaggcca ccgggccgca gcacgcgccg cagctgcggc caccagccgg
      181 cgtactgttc gcggtccgaa tcgaggaaca gcaggtcgac gctggcatcg tcggcctgcg
      241 ccagccacga cccggcatcg ccgtggacca gggtgatgta ctgctccaag ccgctgcgtg
      301 cgaaggtggc acgcgccatc gccgccttgt cctcggcgaa ctccagcgtg gtcacatggc
      361 cgtcgatggc cgcggcggcc tcggccagcc acagcgtgga atagccattg gacgtgccga
      421 tttccagcac ccgccgcgcc tggccaaaac gcaccagcac cgagagcaac tcaccggtct
      481 ccggcgtgat gttgagcatg cgccggccgc gctcggtttc gcgcgcgtcg ttgtcggtac
      541 cgaagcgcac cagctcgtcc ttgagcgcct gcagcacggt ggctacttcc accacgcgcg
      601 cagcagcgcc accgcgccga ccgcaccgga cagccagctc cacatcggca ggtcgcccca
      661 gtaccagccc ggcggttgca gcacgtacat cagcgccgcg atggccagca ggccaacgcc
      721 ggtgatcgca cccaccgcgc gtttctgcag gcgctgcagg ctggcatcga gcgccaccag
      781 atcgcgcgag cgcatcgcca gttcatggcg gccttccacc tgctgggtca gccaggcgtg
      841 taccaggcgc ggcatgtccg gcgcatgggt catgatttcc ggcaggcgct tgccgatctc
      901 gcgcaccacc cggcgcgggc tgtagcgctc gcgcaggatc ttcgccagca ccggcttggc
      961 cactgcccag atgtcgatct gcggatcgag ctggcggccg acaccttcga tgttcagcag
     1021 ggtcttctgc agcaggatca gctgcggctg cagggtcagc tggtagcgct gggccacgcg
     1081 gaacagcttc atcagcactt cggccagcga gatctgcgac agcggacggg tgaagtacgg
     1141 ctcgcacacc gaacgcaccg ccgcttccag atcatcgatg cgcacgtggt ccggcatcca
     1201 gcgtgcctgc acgtgcagtt cggcgatgcg gcggtaatcg cggttgaaga tggccatgaa
     1261 gttctcggcc aggtagtact gatcttcctg cgagagctgg cccatgatgc cgaagtccag
     1321 cgcgatgaaa cgcgggttgg cacggcgcgc cggatcggtg tcgacccaga tgttgccggc
     1381 gtgcgcgtcg gcatggaaga agttgtcacg gaacacctgg gtgtagaaca cccgcacgcc
     1441 cttggcggcc agcgccttgc ggtcgatgcc ggccttgtcc agcgcggcga tgtcatcgga
     1501 cggaatgccc catacgcgtt ccagggtcag cgcgcgctcg gcggtgtggc tccagatcac
     1561 ttccggcacg tacagatcgt cggaattttc ccagaagcgg cgcagcacgc tggcattggc
     1621 accttcgcgt tgcaggtcca gttcggcggc cagggtgttc tcgacttcgg ccaccacttc
     1681 acgcgggcgg atcttgtcgg cacgtggatg ggtgcgctcg accagcgcgg ccagcgagtt
     1741 gagcagggcg atgtcggcgt cgatctgctt ctcgatgcct gggcgcagca ccttgaccac
     1801 cacctgacgg ccgtcggcga gcgtcgctgc gtgcacctgc gcgatcgagg ccgaagccag
     1861 cggttcggtg tcgaagctgg caaacgcctc gctcaccggc aggccgagtg cttcctcgac
     1921 gatgcggcgc gcggtatcgc catcgaacgg cttgacccgg tcctgcagca gggtcagctc
     1981 gttggccacg tccggcggta ccaggtcgcg gcgggtcgac aggatctggc cgaacttgac
     2041 gaagatcggc ccgaggtcct gcagcgccag gcgcaggcgc gcaccgcgcg attgtgcggc
     2101 gatatcggcc gaggcgcgcg gcacgaacgg cttggccagg cgcagccagc gctcggccgg
     2161 cgtgccttgc agcagatcgt cgaggcggta acgcaggatc acccggccga tgcggctggc
     2221 ccgcagcacc gccttcatgc ggcaccccgc aggcgctgca cgcgcgcgcc caggcgctcg
     2281 acgtcatcac gcagcacgtc cacgtcgtca tggaaggcat ccagctcggc acgcggcacc
     2341 acatcacgcg attcctcggt gatgaattcg gctgcgctgt gggccaggtc gatcgcgccc
     2401 tggcgtgcgt gctgcagggc gctgcgcagg gtgttggcca cctgcacgcc cagcacctcg
     2461 ccgaatacgc tgacgaacgg ctgctgccag tccggatcga agcccttggc cagctgctgc
     2521 aggcggcgcg ccaattcggc gtcgccggcc acgcgcacgc ggcccttgcc ggtgctgtcg
     2581 gcgcggcgcg cattggccag cagtggcaac tgcgcgagca cgccggccag gctgctgcgc
     2641 acggccagat cggcttcctg cgtgtcgacc gggccgaccc gcagctgatc gccctcgacg
     2701 ctgatgcgca tcgccagcga aggcgcttcc agggtcaggt cgatatgccg gccgtcgagg
     2761 ctggccagcg catggcgggt atccggatcc agcgcgaggg cgcggttcag ggcgatctgc
     2821 agggcgcggc cagcgaccgg cttgagggac ttgagcaggg agagagccat gtgcgcattc
     2881 tacctgcgtg g
//
LOCUS       DAOKIP010000327         2846 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.334,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000327 DAOKIP010000000
VERSION     DAOKIP010000327.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 2846)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2846)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2846
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.334"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..668)
                     /gene="tsaB"
                     /locus_tag="QEL58_003889"
     CDS             complement(<1..668)
                     /gene="tsaB"
                     /locus_tag="QEL58_003889"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017155557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     dimerization subunit type 1 TsaB"
                     /protein_id="HDS1678315.1"
                     /translation="MKLLAFETATEACSVALHVDGQVLERFEIAPRRHAELSLPWAEA
                     LLAEAGISRRQLDGIALSRGPGAFTGVRLAIAIAQGIALALDRPLLPVSTLQVLALRA
                     PAEETQILSAIDARMGELYVARFERVDGLPVACDAERVCAPAAVALPEGLSAYGVGTG
                     FGAAEGALVAQLGNSLRGFDATALPRASDVLALAVPAFARGEAIAPEKVEPAYLRDNV
                     ALTLV"
     gene            complement(678..2723)
                     /locus_tag="QEL58_003890"
     CDS             complement(678..2723)
                     /locus_tag="QEL58_003890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005418459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase"
                     /protein_id="HDS1678316.1"
                     /translation="MSDLVHASREALSDGGALASHLDAFVPRPAQLRLTEAIADALQQ
                     RDLLLAEAGTGTGKTFAYLVPVLLSGLRTIISTGTRALQDQLYHRDLPRVRQALGVGL
                     RSALLKGRANYLCRYRLQQARGEPRFSSPEQAAQFQRILAWSGRSEFGDIAELDGLAD
                     DSPLLPMVTSTVDNCLGTDCPFWDDCFVVRARQRAQAADVVVVNHHLLLADLALKQDG
                     FGELLPGAQAFVIDEAHQLPELAAQFFGEGFGMRPWQELGRDCLAEARGVGGAQSALQ
                     EPVDQLQQALLALRVAMDGLPSRGTQWRALAMPQVRDGFDTVMAGLVTLEQALQPLRE
                     AAAGLDACHARAREAVSRLSRWLGDDEPSLDFDTDPADVAGAADVLWYELTPRGFRCQ
                     RTPMDVSGPLREHRERSRAAWIFTSATLTVGGGFDHIATRLGLDDPHTLVQPSPFNWP
                     EQALCYLPEGLPDPAARGFGTALIQALRPVLQASQGRAFLLFASHRALREAAEALRDG
                     PWPLFVQGEAPRATLLQRFRESGNGVLLGSASFREGVDVVGEALSVVMIDKLPFAAPD
                     DPVYEARLEAIRSQGGNPFRDEQLPQAVIALKQGVGRLIRSESDRGVLVLCDPRLLNR
                     GYGRVFLDSLPPFRRTRSLADVQAFFTPQWAPVADDAVPATAAAGPDLAPGATFPLF"
BASE COUNT          491 a         1016 c          967 g          372 t
ORIGIN      
        1 accagggtca gcgccacgtt gtcgcgcagg tacgccggtt cgaccttctc cggtgcaatg
       61 gcctcaccgc gcgcgaaggc cggtaccgcc agcgccagca catccgatgc ccgcggcaac
      121 gcagtagcgt cgaagccacg caggctgtta ccgagttgtg ccaccagagc gccctcggcc
      181 gcaccaaatc cggtaccgac gccgtaggcc gacagccctt ccggcaacgc caccgcagcc
      241 ggtgcgcaca cgcgctcggc atcgcatgca accggcaggc cgtccacgcg ttcgaagcgc
      301 gcgacgtaca gttcgcccat ccgcgcatcg atcgccgaca ggatctgcgt ttcttctgcc
      361 ggcgcccgca gcgccagcac ctgcagcgtc gacaccggca gcagcgggcg gtccagcgcc
      421 agcgcgatgc cctgggcaat ggcgatggcc aggcgcacgc cagtgaacgc accggggccg
      481 cggctgagcg cgatgccatc cagctggcgg cggctgatgc cggcttcggc cagcagcgcc
      541 tccgcccacg gcaggctcag ttcggcatgc cggcgcgggg cgatctcgaa acgttccagc
      601 acctgcccat cgacatgcag ggcaacggaa caggcttcgg tggcggtttc aaaggcgagc
      661 agtttcatcg gatcaggtca gaacagggga aacgtggcgc cgggcgccag atccgggccc
      721 gccgcagcgg tggccggaac ggcatcatcg gccacgggtg cccattgtgg cgtaaagaag
      781 gcctgcacat cggccaggct gcgggtacgg cggaacggcg gcagcgaatc gaggaagacc
      841 cggccatagc cgcgattaag caggcgcggg tcgcacagca ccagcacccc gcggtcgctc
      901 tcgctgcgga tcaggcggcc gacaccctgc ttcaacgcga tcaccgcctg cggcagctgc
      961 tcgtcgcgga acgggttgcc gccctggctg cggatcgcct ccagccgtgc ctcgtacacc
     1021 gggtcgtccg gagcggcgaa gggcagcttg tcgatcatca ccacgctcag cgcttcgccg
     1081 accacgtcca cgccctcgcg gaaactggcc gagccgagca gcacgccatt gcccgattcg
     1141 cggaagcgct gcagcaacgt cgcgcgcggc gcctcgccct gcacgaacaa cggccacggc
     1201 ccgtcgcgca gcgcttcggc ggcctcgcgc agggcgcgat gcgacgcgaa cagcaggaat
     1261 gccctgccct gcgacgcctg cagcaccggc cgcagggcct ggatcaacgc agtgccgaag
     1321 ccacgcgcgg ccggatcggg caggccttcg ggcaggtagc acaacgcctg ctcgggccag
     1381 ttgaacgggc tcggctggac cagggtgtgc ggatcgtcca ggcccagccg cgtcgcgatg
     1441 tgatcaaagc caccgcctac ggtcagcgta gccgaggtga agatccatgc cgcccggctg
     1501 cgttcacggt gctcgcgcag cggcccggac acatccatcg gcgtgcgctg gcagcggaaa
     1561 ccacgcgggg tgagctcgta ccagagcaca tcggccgcac ccgccacgtc cgcagggtcg
     1621 gtgtcgaaat ccaggctggg ctcatcatcg cccagccagc ggctgagccg cgagaccgct
     1681 tcgcgcgccc gcgcatggca ggcatccagg ccagcggcag cttcgcgcag tggttgcagt
     1741 gcctgctcca gcgtcaccag ccccgccatc accgtatcga agccgtcgcg cacttgtggc
     1801 attgccagtg cgcgccactg cgtgccgcgc gatggcaggc catccatcgc tacacgcaac
     1861 gccagcagcg cctgctgcaa ctggtcgacc ggctcctgca gggccgactg cgcaccgccc
     1921 acgccacgcg cttcggccag gcagtcgcgg ccgagctcct gccacgggcg catgccaaag
     1981 ccctcgccga agaactgcgc ggccaactcg ggcagctgat gcgcctcgtc gatgacgaac
     2041 gcctgcgccc ccggcagcag ttcgccgaag ccatcctgct tcaatgccag gtccgccagc
     2101 agcaggtgat ggttgaccac caccacgtcg gccgcctgcg cacgttgccg cgcacgcacc
     2161 acgaagcagt cgtcccagaa cgggcagtcg gtgcccaggc agttgtcgac ggtggaggtg
     2221 accatcggca gcagtggtga gtcgtcggcc agcccgtcga gctcggcgat gtcaccgaac
     2281 tcggaacgac cggaccaggc caggatgcgc tggaactgcg ccgcctgctc ggggctggaa
     2341 aaccgcggct caccacgcgc ctgctgcagg cgatagcggc acaggtagtt cgcacgcccc
     2401 ttcagcagcg cgctgcgcag gccgacgccg agcgcctggc gcacgcgagg aagatcgcgg
     2461 tggtagagct ggtcctgcag cgcgcgggta ccggtggaga tgatggtacg cagcccggac
     2521 agcagtaccg gcaccaggta ggcgaaggtc ttgccggtgc cggtaccggc ctcggccagc
     2581 agcagatcgc gctgctgcag cgcatcggcg atggcttcgg tcaggcgcaa ctgcgccgga
     2641 cgcgggacga aggcgtccag gtgcgaggcg agcgcgccgc cgtcgctgag ggcttcgcgg
     2701 ctggcatgga caagatcgga catcagaagg aaaggatacc cggccgggcg ctgcccggca
     2761 cccgtttcag gccagagcac cagcagcggc aacggcaaca gcgtttgttc atggctctgg
     2821 gttgtactga gggctggcag gggact
//
LOCUS       DAOKIP010000328         2837 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.335,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000328 DAOKIP010000000
VERSION     DAOKIP010000328.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 2837)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2837)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2837
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.335"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(204..1154)
                     /locus_tag="QEL58_003891"
     CDS             complement(204..1154)
                     /locus_tag="QEL58_003891"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005913284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase catalytic
                     subunit"
                     /protein_id="HDS1678317.1"
                     /translation="MTAQQIDASGRLRHLLTLEGLPRETLLQLLDRAGQIRDAAVGRV
                     GNKRHVLAGSAVCTLFFEPSTRTRSSFQLAAQRLGADVLNFDASTSSTRKGETACDTL
                     RNLEAMGVRGFVVRHPDDGAVAALAEAAGEGTALINAGDGRSSHPTQGLLDMLTLRQA
                     KGPDFSKLKVVIVGDVKHSRVARTDLHALRTLGVGEIRVCGPQSLLPDDETLKGCVVG
                     DDFDAMLEGVDALMMLRLQRERMEEGLVPSLEQYHAEYGLTNERLARAGKDAAVLHPG
                     PINRGVEVTDEVADGPQSWVLRQVANGVAVRMAVLETLLG"
     gene            complement(1171..1638)
                     /gene="ruvX"
                     /locus_tag="QEL58_003892"
     CDS             complement(1171..1638)
                     /gene="ruvX"
                     /locus_tag="QEL58_003892"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019302529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction resolvase RuvX"
                     /protein_id="HDS1678318.1"
                     /translation="MSAAPAIRRDGTVLGFDVGSRRIGVAIGSAFAAHARAVAVVDVH
                     GNGPDWAAIERLLKEWKPDGLVVGDPLTLDGQDQPNRKRAQGFARQLRERFKLPVVMI
                     DERSSSVEAARRFAVERAEGRKRRRDAAALDAVAAAVIIDRWLSSPDDATPIP"
     gene            complement(1658..2224)
                     /locus_tag="QEL58_003893"
     CDS             complement(1658..2224)
                     /locus_tag="QEL58_003893"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005415546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqgE/AlgH family protein"
                     /protein_id="HDS1678319.1"
                     /translation="MPVTPTSLADHLLVALPSLLDATFARSVALICQHDENGAMGVLV
                     NQPSEYTLGEVLAQMDITTGDGDLQARMVLNGGPVHPERGFVIHDDARAWDSSLTVGE
                     GLYLTTSRDILEAMARGEGPANAVVTLGCAGWGAGQLESELAENSWLTVPADAELVFQ
                     LPLEQRWQGAASRIGVDLFRLTDYSGHV"
     gene            2314..>2837
                     /locus_tag="QEL58_003894"
     CDS             2314..>2837
                     /locus_tag="QEL58_003894"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005408375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase I"
                     /protein_id="HDS1678320.1"
                     /translation="MSGYCLIAPGHPVHDYYHANEYGFPQRDERELFERLVLEINQAG
                     LSWETILKKREGFRTAYDGFDVDRVAAYAEQDIERLLSDAGIIRNRLKVLAAIHNAQV
                     IQQLRASHGSFAAWLDAHHPRSKADWVKLFKKTFRFTGGEITGEFLMSLGYLPGAHAA
                     DCPVHARLLKLSPP"
BASE COUNT          456 a          980 c          963 g          438 t
ORIGIN      
        1 gtgaactccc attgtgccga ccaacggtcg acacctaccc agatagtcca gggtgaattc
       61 ccattgtgcc gaccaacggt cggcacctac ccagatagtc cagggtgaat tcccattgtg
      121 ctgaccaacg gtcggcacct acccagatag tccaaggtga atccgccttt gtaccaaccg
      181 gcggttggca cccaccagag cggtcagccc agcagggttt ccagcacggc catgcgcacg
      241 gcgacgccgt tggcgacctg gcgcagtacc cacgactgcg ggccgtcggc cacctcgtcg
      301 gtcacttcca cgccgcggtt gatcgggccc gggtgcagca cggctgcatc cttgccggcg
      361 cgcgccaggc gttcgttggt cagcccgtac tcggcgtggt actgctccag cgacggcacc
      421 aggccttctt ccatgcgctc gcgctgcagg cgcagcatca tcagcgcgtc gacaccttcc
      481 agcatggcgt cgaaatcatc gccgaccacg cagcccttca gggtctcgtc gtccggcagc
      541 agcgactgcg ggccgcatac gcggatctcg cccacgccca gggtacgcag cgcatgcagg
      601 tcggtgcggg ccacgcgcga gtgcttcacg tcgccgacaa tcaccacctt cagcttcgag
      661 aagtccgggc ccttggcctg gcgcagggtc agcatgtcca gcaggccctg ggtcgggtgc
      721 gagctgcggc cgtcgccggc attgatcagt gcggtgccct cgcccgccgc ttcagccagt
      781 gcggcgacgg cgccatcatc ggggtggcgc accacgaagc cgcgcacgcc catcgcttcc
      841 aggttgcgca gcgtgtcgca ggcggtttcg cccttgcgcg tggacgaggt cgaggcatcg
      901 aagttcagca cgtcggcgcc caggcgctgc gcggccagct ggaacgagct gcgggtgcgg
      961 gtggacggtt cgaagaacag cgtgcatacc gccgaaccgg ccagcacgtg ccgcttgttg
     1021 ccgacgcggc cgaccgcggc gtcgcggatc tgcccggcgc ggtcgagcag ctgcagcagg
     1081 gtttcgcgcg gcagcccctc aagggtcaac aggtggcgca ggcgtccgga ggcatcgatt
     1141 tgctgggcgg tcatggcggg agtcgtgcag tcagggaatg ggggtggcgt cgtcgggaga
     1201 cgacagccag cgatcgatga tcaccgccgc ggccacggcg tcgagggcgg ccgcatcgcg
     1261 gcggcgcttg cgcccttcgg cgcgctcgac ggcgaagcgg cgggcggcct cgaccgagct
     1321 cgagcgctcg tcgatcatca ccaccggcag cttgaagcgt tcccgcagct ggcgggcaaa
     1381 gccctgcgcg cgcttgcggt tgggctggtc ctggccgtcc agggtcagcg ggtcgccgac
     1441 caccaggcca tcgggcttcc attccttgag caggcgttcg atcgccgccc agtccggccc
     1501 attgccgtgc acatcgacca cggccactgc gcgtgcatgg gcggcgaagg cactgccgat
     1561 ggccacgccg atacgccgcg aaccgacatc gaaacccaga accgtgccgt cgcggcggat
     1621 ggccggggca gcagacaccg gtgcaggggc cgccggatca gacatggccg ctgtagtcgg
     1681 tcagccggaa cagatccacg ccgatgcgcg aggccgcgcc ttgccagcgc tgttccagcg
     1741 gcagctggaa caccagctcg gcatcggccg gcacggtcag ccaactgttc tcggccagct
     1801 cgctttccag ctgccctgcg ccccagccgg cgcagccgag ggtgaccacg gcattggccg
     1861 ggccttcgcc gcgcgccatc gcttcaagga tgtcgcgcga ggtggtcagg tacaggccct
     1921 cgcccacggt caggctggaa tcccacgccc gtgcgtcatc gtggatgacg aagccgcgtt
     1981 cggggtgcac cgggccgcca ttgagcacca tgcgcgcctg caggtcgccg tcgccggtgg
     2041 tgatgtccat ctgtgcgagc acttcgccca gggtgtattc ggacggctgg ttgaccagca
     2101 cgcccatcgc gccgttctcg tcgtgctggc agatcagcgc gacgctgcgg gcgaaggtcg
     2161 cgtcgagcag cgacggcagc gcgacgagca ggtgatcggc aagggaggtc ggcgttactg
     2221 gcatggcgcc attctagcgg ctgggcgcgc cgggcgcctc cacccggcgg tcacggcgcg
     2281 cataatggcc agcccgtacc gcaggaattc aacgtgtccg gctactgcct catcgccccg
     2341 ggccatccgg tgcacgatta ctaccacgcc aacgagtacg gcttcccgca gcgcgacgaa
     2401 cgcgagctgt tcgaacggct ggtgctggaa atcaaccagg ccggcctgag ctgggagacc
     2461 atcctgaaga agcgcgaagg cttccgcacg gcctatgacg gcttcgacgt ggaccgcgtg
     2521 gcggcctatg ccgagcagga catcgaacgg ctgctgtcgg atgcaggcat catccgcaac
     2581 cggctgaagg tactggcggc gatccacaac gcgcaggtga tccagcagct gcgcgccagc
     2641 catggcagct tcgccgcctg gctcgatgcc caccacccgc ggagcaaggc tgactgggtg
     2701 aagctgttca aaaagacctt ccgcttcact ggcggcgaga tcaccggcga gttcctgatg
     2761 agcctgggct acctgcccgg tgcgcacgcc gcggactgcc cggtgcatgc gcggctgctg
     2821 aaactgtcgc caccgtg
//
LOCUS       DAOKIP010000329         2772 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.336,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000329 DAOKIP010000000
VERSION     DAOKIP010000329.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 2772)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2772)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2772
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.336"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..676)
                     /locus_tag="QEL58_003895"
     CDS             complement(<1..676)
                     /locus_tag="QEL58_003895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010481370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDS1678321.1"
                     /translation="MIIATAGGFFRHLDAGKWADIGQATVDTLLMLLGSLPLTLAIGL
                     PLGVLLYLFGAPQMKRRPLAYGVLALVVNLLRSVPFIILMIVLIPVTLFLMGTSLGVR
                     GAIVPLVIGAAPFYARLVETALREVDRGVIEATQAMGATTWQLVTRVLLPEARPGLIA
                     GATVTTVALIGFTAMGGAIGSGGLGDLAFRDGYQRSHTDVALVTVVLLLVLVQLLQML
                     GDRLVAH"
     gene            complement(673..1680)
                     /locus_tag="QEL58_003896"
     CDS             complement(673..1680)
                     /locus_tag="QEL58_003896"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019183663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine ABC transporter ATP-binding protein"
                     /protein_id="HDS1678322.1"
                     /translation="MIEFQRLHKSYAVAGREVSALQPLDLTIEAGEVFGIIGHSGAGK
                     STLIRMINRLEEPSGGRLLIGGEDVTALDADGLRALRRRIGMIFQHFNLLSSRTVAGN
                     VAFPLELAGTPKAEIDARVAELLQTVGLEAHAQKYPAQLSGGQKQRVGIARALATRPQ
                     ILLCDEATSALDPQTTASVLSLLSKINRELGLTIVLITHEMDVIRRVCDRVAVLDAGQ
                     MVETGPVTRVFLHPQHPTTRRFVSESEHVDEGALHRDFDAVGGRIVRLTFLGGDTYEP
                     LLGSVARETGVDYNILSGRIDRIKDTPYGQLVVALVGGDQSAAQAAFVAAGVHVEELR
                     R"
     gene            complement(1828..2724)
                     /locus_tag="QEL58_003897"
     CDS             complement(1828..2724)
                     /locus_tag="QEL58_003897"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011348672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HDS1678323.1"
                     /translation="MNVQRSPSRAVAWMVAAVACFSLMDAGMKQLSASYPTLEVTFLR
                     GAASLPFVLVWVLVSAGPRSLVPRRWGLHLLRGALGMAMIGCFVFALRDLPLSTAYTI
                     YFVAPLLIAALSVPLLGERVGPRRWVAIGIGLVGVLVVLRPGVDGFISVPGLMVLAAA
                     TAYAVAAITVSLLTRTDTSQSMVVWFLVIMAVGAGLLALPGWVPLQLAHAPLIAGMGL
                     AGALGQIALTKAFQLGEASMIAPLEYSGLVWVIGWDLAFWGQLPDGYTWVGAAIIVAS
                     GLYLLHRERVNRQEPPKPLDHP"
BASE COUNT          506 a          968 c          941 g          357 t
ORIGIN      
        1 aatgcgcgac cagacggtcg cccagcatct gcagcagctg caccagcacc agcagcagga
       61 ccacggtgac cagggccacg tcggtgtgcg accgctggta gccgtcgcgg aaggccaggt
      121 cgcccaggcc accggaaccg atcgcaccgc ccatggcggt gaagccgatc agggccacgg
      181 tggtgaccgt ggcaccggcg atcaggccgg gacgcgcttc cggcagcagc acgcgggtga
      241 ccagctgcca ggtggtggcg cccatcgcct gggtcgcttc gatcacaccg cggtcaacct
      301 cgcgcagcgc ggtctcgacc aggcgcgcat agaacggcgc agcaccaatg accagcggca
      361 cgatcgcgcc gcgcacgccc agcgaggtgc ccatcaggaa cagggtgacc gggatcagca
      421 cgatcatcag gatgatgaaa ggcaccgagc gcagcaggtt caccaccagc gccagcacgc
      481 cataggccag cggccggcgc ttcatctgcg gggcgccgaa caggtacagc agcacgccca
      541 gcggcaggcc gatggccagg gtcagcggca gcgaaccgag caacatcagc agggtgtcga
      601 cggtggcctg gccgatatcg gcccacttgc ccgcatccag gtggcggaag aagccgccgg
      661 cagtggcgat gatcatcgac gcagttcctc aacgtgcacg ccggcagcca cgaacgcggc
      721 ctgcgcggcg gactggtcac cgcccaccag ggcgaccacc agctggccat acggggtgtc
      781 cttgatccgg tcgatgcggc cggacaggat gttgtaatcg acgccggtct cgcgcgcgac
      841 gctgcccagc aagggctcgt aggtgtcgcc gccgaggaag gtcaagcgca cgatgcggcc
      901 accgacggcg tcgaaatcac ggtgcagcgc gccttcgtcg acatgctccg attcactgac
      961 gaatcggcgc gtggtcgggt gctgcgggtg caggaacacc cgggtgaccg gtccggtctc
     1021 gaccatctgc ccggcatcga gcacggcaac gcgatcgcag acgcgacgga tcacgtccat
     1081 ctcgtgggtg atcagcacga tggtcaggcc cagctcgcgg ttgatcttcg acagcagcga
     1141 cagcaccgag gcggtggtct gcggatcgag cgcactggtg gcttcgtcgc acagcaggat
     1201 ctgcgggcgc gtcgccagcg cgcgggcgat gccgacgcgc tgcttctggc caccggacag
     1261 ctgcgccggg tacttctgcg catgcgcctc caggcccacg gtctgcaaca gctcggccac
     1321 gcgcgcgtcg atctccgcct tcggcgtgcc ggccagctcc agcgggaagg cgacattgcc
     1381 ggccaccgtg cgcgacgaca acaggttgaa gtgctggaag atcatgccga tgcgccgccg
     1441 cagcgcgcgc aggccatcgg cgtccagtgc ggtgacatcc tcgccaccga tcagcaaccg
     1501 gccgccgctg ggttcttcca ggcggttgat catgcggatc agggtcgact tgcccgcgcc
     1561 ggaatggccg atgatgccga agacctcacc ggcctcgatg gtcaggtcca gcggttgcag
     1621 cgcgctgact tcgcggccgg caacggcata ggatttgtgc aggcgctgga actcgatcac
     1681 gggcgtggct caccggctgg gtgacggaag ggggcgtgca gcctaccagc gccggcgctc
     1741 acgcgcccgc gccataagcc ggaatgttat tccttttggt tctaagccgc ccagcccggt
     1801 cgtgccgccc gctggccggc aaccgcctta cgggtggtcc agcggctttg gcggctcctg
     1861 ccggttcacc cgctcacggt gcagcaggta caggccggaa gcgacaataa tcgccgcgcc
     1921 cacccaggtg tagccgtccg gcagctggcc ccagaaggcc agatcccagc cgatcaccca
     1981 gaccaggccg ctgtactcca gcggcgcgat catcgaggct tcgcccagct ggaaggcctt
     2041 ggtcagggcg atctggccca acgccccggc caggcccatg ccggcgatca gcggcgcgtg
     2101 cgccaattgc agcggcaccc agccgggcag ggccagcagg ccggcgccaa cggccatgat
     2161 caccaggaac cacaccacca tcgactgcga ggtatcggtg cgggtcagca ggctgaccgt
     2221 gatcgcggcc acggcgtagg cggtggccgc ggccagcacc atcaaccccg gcaccgaaat
     2281 gaagccgtcc acgcccggcc gcagcaccac cagcacgccg accaggccga tgccgatggc
     2341 gacccagcgc cgcggcccga cccgttcgcc cagcagcggc accgacagtg cggcgatcag
     2401 cagcggggcg acaaaataga tggtgtaggc ggtggacagc ggcaggtcgc gcagggcgaa
     2461 cacgaagcag ccgatcatcg ccatgcccag tgcgccacgc agcaggtgca ggccccagcg
     2521 tcgcggtacc agcgatcgcg ggccggcgct gaccagcacc cagaccagca cgaatggcaa
     2581 tgaggccgcg ccgcgcagga aggtcacttc cagggttgga tagctggccg acagctgctt
     2641 catgccagcg tccatcagcg agaaacaggc gactgccgcg accatccagg ccaccgcgcg
     2701 cgagggggag cgttgcacgt tcatggccca ttatcgccga ccgcgccgga ttgtagagcc
     2761 gagccatgcc cg
//
LOCUS       DAOKIP010000330         2744 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.337,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000330 DAOKIP010000000
VERSION     DAOKIP010000330.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 2744)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2744)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2744
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.337"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(1..453)
                     /locus_tag="QEL58_003898"
     CDS             complement(1..453)
                     /locus_tag="QEL58_003898"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019337899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MgtC/SapB family protein"
                     /protein_id="HDS1678324.1"
                     /translation="MELTQDVSILLRVGAAMLFGGVLGVEREMGKHAAGLRTHMLIAG
                     AAALIVGLGDSVAEHFQQERYRDLLQVDPVRLIEAVVACVGFVAAGTILRGSREDQVS
                     GLTTASSLIMAAAIGIAVGIGKYVIAIGVSVLCVLVLAVMRRLERRIS"
     gene            complement(576..1334)
                     /locus_tag="QEL58_003899"
     CDS             complement(576..1334)
                     /locus_tag="QEL58_003899"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019337900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HDS1678325.1"
                     /translation="MIDYQLTGKAAIVTGGVSGIGLAVAQTLAASGARISVWDLKQDA
                     VDATVAQLQGSGAQAIGIALDVTDDAAVEAAVQRTVKELGGLHVAVNNAGIGGPAASS
                     GDYPIDGWQRVIDVNLTSVFLCQRAQIQAMRAAGSGGSIINMASILGQVGYAGSTAYV
                     AAKHGVVGLTQTAAWEHAGDGIRVNAVGPGFISTPLLEKMDPKVRATLEGRHALKRLG
                     TAEEVAALVAWLASDDASFATGTYYAIDGGYLAQ"
     gene            1781..2734
                     /locus_tag="QEL58_003900"
     CDS             1781..2734
                     /locus_tag="QEL58_003900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005413776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDS1678326.1"
                     /translation="MSRYFTFADYRRFGHRHGFDYRADPEHLRDDQWAGHGEVNEQFL
                     RGGMSLIASDVHNRFPYVATAQQSPGLAIRVMLQGQVDVRMPRRAGFTLRAGTAMTAH
                     HREQVEMTGAHPGETRMRGVSVMVPAEIDPDLFQLPQLHAALNTHLECRHWAIPHTLL
                     PVLGQLFDSPWQDGIDALWREGVALQLLAVGLQAEDLQTDHVRTLRAGQRERLERVRA
                     YLHDDPSHAHSLLELAQLACMSPSSLRRHFAQQYGCSVFDYLHEQRMRHAEQGLREDG
                     WTVEQAAAASGYRHPSNFAAAFRKRFGLVPSRWRTGPSKVG"
BASE COUNT          486 a          985 c          816 g          457 t
ORIGIN      
        1 ttacgaaatc cgcctctcca accgccgcat caccgccagc accagtacgc acagcacgct
       61 gaccccgatc gcgatcacgt acttgccgat gcccacggca atgccgatgg ccgccgccat
      121 gatcagtgaa ctggcggttg tcaacccgct gacctggtcc tcgcgcgaac cgcgcaggat
      181 ggtgccggcc gcaacgaaac cgacgcaggc caccaccgct tcaatcagtc gcaccggatc
      241 gacctgcagc aggtcgcggt agcgctcctg ctggaaatgc tcggccaccg aatcaccgag
      301 gccgacgatc agcgcagcgg cgccagcaat cagcatgtgc gtgcgcaggc cggcagcgtg
      361 cttgcccatt tcgcgctcga cgccgagcac gccaccaaac agcatcgccg cgcctacgcg
      421 cagcaggatc gagacatcct gggtgagttc catcgccgcc tccgggtatt tccggcagcg
      481 ttgcgtgcac agcgtgggac gggggtgaag gcagcaccac ggctcgttca cccgatggcg
      541 ccaggccgcg cccggcgcca tcggtgatca acgcatcact gcgccaggta gccaccatcg
      601 atcgcgtaat aggtgccggt cgcgaacgag gcgtcgtcgc tggccagcca ggccaccagc
      661 gccgccactt cttccgccgt gcccagccgc ttcaacgcgt gccgcccttc cagcgtggcg
      721 cgcaccttcg ggtccatctt ctccagcagc ggcgtgctga tgaagcccgg accgaccgca
      781 ttgacacgga taccgtcgcc cgcatgctcc caggcagcgg tctgggtcaa cccgaccacg
      841 ccgtgcttgg ccgcgacata ggcggtggaa ccggcatagc ccacctggcc caggatcgac
      901 gccatgttga tgatgctgcc accggaaccc gctgcacgca tcgcctggat ctgcgcacgc
      961 tggcacagga atacgctggt caggttgaca tcgatcacgc gctgccagcc atcgatcgga
     1021 tagtcaccgc tgctggcggc cggtccgccg atgccggcat tgttgaccgc cacatgcagg
     1081 ccgcccagtt ccttcaccgt gcgctgcacc gccgcctcga cagcggcatc atcggtcacg
     1141 tccagtgcaa tgccgatcgc ctgtgcaccg ctgccctgca gctgcgccac cgtcgcatcc
     1201 accgcgtcct gcttcagatc ccagaccgaa atacgcgcac cggacgcagc cagggtctgt
     1261 gcgaccgcca gaccgatgcc ggatacacct ccggtcacga tcgcggcctt gccggtgagc
     1321 tggtaatcaa tcatctgcgt tctccatctg tgggggtttc gatgcggctg gccgctgttg
     1381 aaccctcacg ctacgacgtt gcctgtgata acccggcaga cagtgcgtcc acgaacgatc
     1441 gttccaccca taaaacctca actcaggttg atgtagggat ctgcgtatgg atttgcatgc
     1501 aagacgccgc cgtatgttct gcgcagcaat caacttggcc gtattgatca atcgttttga
     1561 ccatctcgaa atcaaacgca gatgaatcag ggcgacaata ggaaacgttt ccagtttctt
     1621 cgacacacga attccaatct ggcgtttccc cagccatccg gcatgccgtc gccaccgcat
     1681 cgcagcgggt ctgcacaggc caccaccgga cgtgcatctg catcgcagag cgcatgggcc
     1741 aggcacagcc agcgtccacc tcctgcgtac gtgccgagca atgtcccgat acttcacttt
     1801 tgccgattac cgccgtttcg gccaccgcca cggctttgat taccgcgccg atccggaaca
     1861 cctgcgcgac gaccagtggg ccggccacgg cgaggtcaac gagcagttcc tgcgcggcgg
     1921 catgagcctg atcgcgtccg acgtgcataa tcgtttcccg tacgtcgcca ccgcccagca
     1981 gagcccgggg ctggccatcc gcgtgatgct gcagggccag gtcgacgtcc gcatgccacg
     2041 acgcgcgggc ttcactctgc gtgccggcac cgcgatgacc gcgcaccatc gcgagcaggt
     2101 cgagatgacc ggcgcacacc caggcgagac gcgcatgcgc ggggtcagcg tgatggtgcc
     2161 ggccgagatc gatccggacc tgttccagct gccgcagctg catgctgcgc tcaacaccca
     2221 cctggagtgc cgccactggg cgattccgca caccctgctg ccggtgctgg gccagctgtt
     2281 cgacagcccc tggcaggacg gcatcgatgc gctgtggcgc gagggcgtgg ccctgcagct
     2341 gctggccgtc ggcctgcagg ccgaggatct gcagaccgac cacgtgcgca cgctgcgcgc
     2401 gggacagcgc gagcgcctgg agcgcgtgcg cgcctacctg cacgatgatc ccagccacgc
     2461 ccacagcctg ctcgaactgg cgcagctggc ctgcatgagc ccgagctcgc tgcgccgcca
     2521 tttcgcccag cagtacggtt gctcggtgtt cgactacctg cacgagcaac gcatgcgcca
     2581 cgccgaacag ggcctgcgcg aagacggctg gaccgtcgag caggctgcgg ccgccagtgg
     2641 ctatcgccat cccagcaact ttgctgccgc cttccgcaag cgtttcggcc tggtgcccag
     2701 ccgttggcgt accggccctt caaaggtcgg gtagcagctt ctgt
//
LOCUS       DAOKIP010000331         2721 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.338,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000331 DAOKIP010000000
VERSION     DAOKIP010000331.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 2721)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2721)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2721
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.338"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..735)
                     /locus_tag="QEL58_003901"
     CDS             complement(<1..735)
                     /locus_tag="QEL58_003901"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008264661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system tip protein VgrG"
                     /protein_id="HDS1678327.1"
                     /translation="MDAAGVALVRAITLDARQPRLLRLQGLHETWVVERFEGTESVCG
                     DNRLQIDCLATHAFLELESWLEQPLTLQLRQADGSLRQWHGLCTEAAQLGSDGGLARY
                     RLILEPWTALLRLRRNAVIFQDQDTRAICEQIFTDYPQAVFRFDVQAELPVRAITTQY
                     RETDWAFVTRLLAEAGLAWRVEQAQGDEAAHTLVVFEPGADLSDVGRVRFHRADMAEA
                     SDGITAFAERQQLVPNASTVASWHSEQ"
     gene            complement(901..2688)
                     /locus_tag="QEL58_003902"
     CDS             complement(901..2688)
                     /locus_tag="QEL58_003902"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005414785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDS1678328.1"
                     /translation="MTAPTAPRWPVRYLLFIGGLGGLLYGIDIGIIAGALPYLEATAS
                     HAWQLSSQQLGFVVAAVLLGSVLSSLFAGMVADLVGRRGAMLLAGLLFTASIPIMALA
                     SGYTPLLLGRLLQGISGGLIGVVIPLYLAEVLSPERRGRGAAMFQLLLTIGLVLAALI
                     GLYHAHAVDAAAEAVRSLPVAQQAQELFTVKDHAWRTIFWTCLAPGLLFCAGIFWLSE
                     SPRWLVRRGRIDDARRSLQRVLPASEVEPTLAQIQAPESSSRDGKRDPLLSRRYVVPF
                     LLACVVLACTQATGINSVLAYAVNILNQAGLSGSVANSADVAIKLLNAVMTVVALLLV
                     DRKGRKFLLMLGSGGICVALLAAATLFFQAERGRADVQSQLQAAVSGDGLQLVLDEAQ
                     WQRLGGGIDSEGRPLQLTVSYAYGDFTNVRALRSDNLTDRELRIERAGTVQPDSVIGA
                     FFRKLHLNPFADPAKAAQAPLRIEQARIGPVPPPAHGWAVAACILVFVAFFAVGPGVC
                     VWLALSELMPNRIRSNGMSIALLINQFVSTTIAAIFLPTVGHYGYASMFVFWAACTFV
                     FFLVAALWLPETKGKSLEEIEARFAGKRG"
BASE COUNT          459 a          903 c          962 g          397 t
ORIGIN      
        1 ctgctcgctg tgccagctgg ccacggtgct ggcgttgggc accagctgct ggcgctcggc
       61 aaacgcggtg atgccgtcgc tggcctcggc catgtcggcg cgatggaagc gcacgcggcc
      121 gacgtcgctc aggtcggcac ccggttcaaa caccaccagc gtgtgcgcgg cctcgtcgcc
      181 ctgcgcctgc tcgacacgcc aggccaggcc ggcctcggcc agcaggcggg tgacgaaggc
      241 ccagtcggtc tcgcggtact gggtggtgat cgcacggacc ggcagttcgg cctgcacgtc
      301 gaagcggaac accgcctgcg ggtagtcggt gaagatctgc tcgcagatgg cgcgggtgtc
      361 ctggtcctgg aagatcaccg cgttgcggcg cagccgcagc agcgccgtcc agggttccag
      421 gatcaggcgg tagcgggcca ggccgccatc gctgcccagc tgtgccgcct cggtgcacag
      481 gccatgccac tgccgcagcg agccgtcggc ctggcgcagc tgcagggtca gcggctgctc
      541 cagccaggat tccagttcca ggaaggcgtg ggtggccagg cagtcgatct gcaggcggtt
      601 gtcgccgcag accgactcgg tgccttcgaa gcgttcgacg acccacgttt catgcagccc
      661 ctgcaggcgc agcaggcgtg gttgccgggc gtcaagcgtg attgcccgga ccagtgcgac
      721 accagcggca tccatgccca tgcagaatct ccctttgtag tgggagaact gttggggcag
      781 gacgccgctg gctgccgcga gctacgccat tcctgcggga tgcatcacgc ttgccggccc
      841 cggatcgggc tgttcacgac aggattacgg aagacgggct gttcaatcgc gacgccgcga
      901 tcagccccgc ttgccggcaa accgtgcttc gatctcttcc agcgacttgc ccttggtctc
      961 gggcagccat agcgcggcca ccaggaagaa cacgaaggtg cacgccgccc agaacacgaa
     1021 catgctggcg tagccgtagt ggcccaccgt gggcaggaag atcgcggcga tggtggtgga
     1081 cacgaactgg ttgatcagca gcgcgatgct catgccgttg gaacggatgc ggttgggcat
     1141 cagttcggac agcgccagcc acacgcagac gccggggccg accgcgaaga acgcgacgaa
     1201 taccaggatg caggcggcca ccgcccagcc gtgtgccggc ggcggcaccg ggccgatgcg
     1261 ggcctgctcg atgcgcaacg gtgcctgggc ggccttggcc gggtcggcga acgggttcag
     1321 atgcagtttg cggaagaacg cgccgatcac gctgtccggc tgcacggtgc cggcacgctc
     1381 gatgcgcagt tcgcgatcgg tcaggttgtc gctgcgcagg gcgcgcacat tggtgaaatc
     1441 gccgtaggcg tacgacacgg ttagctgcag tggccggcct tcgctgtcga tgcctccgcc
     1501 caggcgctgc cactgcgctt catccagcac cagctgcagg ccatcgccgc tgaccgcggc
     1561 ctgcagctgc gattgcacgt ctgcgcggcc acgctcggcc tggaagaaca gggtcgcggc
     1621 ggccagcagg gccacgcaga taccgccgct gccgagcatc agcaggaact tgcggccctt
     1681 gcgatcgacc agcagcagcg cgaccacggt catcaccgca ttgagcagct tgatcgccac
     1741 gtcggcgctg ttggccaccg agccggacag gccggcctgg ttgaggatgt tcaccgcgta
     1801 cgccagcacc gaattgatgc cggtggcctg ggtgcaggcc agtaccacgc aggcgagcag
     1861 gaacggcacc acgtagcggc ggctgagcag cgggtcgcgc ttgccgtcgc ggctgctcga
     1921 ttccggcgcc tggatctgtg caagcgtcgg ctccacctcc gaagcgggca gtacgcgctg
     1981 caggctgcgg cgcgcatcat cgatgcggcc gcggcgcacc agccagcgcg gcgactcgga
     2041 cagccagaag atgccggcgc agaacagcag gcccggcgcc aggcaggtcc agaagatggt
     2101 gcgccaggcg tggtccttca ccgtgaacag ttcctgcgcc tgttgcgcga ccggcagtga
     2161 gcgcacggct tcagcggcgg cgtcgactgc atgtgcgtgg tacaggccga tcagcgccgc
     2221 cagtaccagg ccgatggtca gcagcagctg gaacatggcc gcaccgcgcc cgcgtcgttc
     2281 ggggctgagc acttcggcca ggtacagcgg aatcaccaca ccgatcaggc cgccactgat
     2341 gccctgcagc aggcggccta gcagcaacgg cgtgtagccc gaggccagcg ccatgatcgg
     2401 aatcgacgcg gtgaacagca ggccggccag cagcatcgcg ccgcggcggc cgaccaggtc
     2461 ggcgaccatg ccggcgaaca gcgaggacag cacgctgccc agcagcaccg ccgccacgac
     2521 gaagccgagc tgctggctgc tgagctgcca ggcgtggctg gcggtcgctt caagataggg
     2581 cagggcacca gcgatgatgc cgatgtcgat gccgtacagc aggccgccga ggccgccgat
     2641 gaagagcagg tagcgtacgg gccagcgcgg ggcggtgggt gcagtcatcg gcatattccc
     2701 aggaggcgtt tcggtgcgga t
//
LOCUS       DAOKIP010000332         2715 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.339,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000332 DAOKIP010000000
VERSION     DAOKIP010000332.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 2715)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2715)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2715
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.339"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            40..426
                     /locus_tag="QEL58_003903"
     CDS             40..426
                     /locus_tag="QEL58_003903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003477371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HDS1678329.1"
                     /translation="MSRQIINTEKAPAAIGPYSQAVRAGNTVYFSGQIPLDPASGDIV
                     GAGDVEAQARRAFDNLKAVAEAAGGSLDKVVRLGLYLTDLGEFAKVNAVMQDYFQAPY
                     PARSTIEVSGLPKGANFEVDAVMVID"
     gene            434..2545
                     /gene="recG"
                     /locus_tag="QEL58_003904"
     CDS             434..2545
                     /gene="recG"
                     /locus_tag="QEL58_003904"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017161420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecG"
                     /protein_id="HDS1678330.1"
                     /translation="MARKAAVTPVLSPSGEASLAMLAGVGPAVAAKLQARGLATLQDL
                     WLHLPLRYEDRTRLTRIEDLRNGVPAQVEGRVVAVERGMRYRPMLKVAVEDEGQGTLV
                     LRFFHFRQQQVGQFAVGNRLRCFGTPKPGHLGLEIVHPSYQVLGRNDDPELGDRLDPV
                     YPTVEGVGPMTMRKLIGQALDRLPEESTLELLPSGWLDGLKLPSLRSALLTVHRPPPD
                     ADLAALAAGTHPAQRRLAMEELLAHHLSLRRQRIALQAHHAPPLAGPGTLAKALLKQL
                     PFALTGAQARVFKQIREDLSRPSPMLRLVQGDVGSGKTVVAALAAMLAVEQGKQVALA
                     APTELLAEQHLNNLRGWLEPLGVRIAWLAGKVTGKARAKVMEQVANGEAQVVVGTHAL
                     MQDAVVFQDLALAIVDEQHRFGVHQRLALRDKGAGGNSVPHQLVMTATPIPRTLAMSE
                     YADLDVSAIDELPPGRTPVQTVALNNDRRPELIERIALACREGRQVYWVCTLIEESEE
                     LDATPAQATYESLQALLPGVRVGLVHGRLKAAEKLATMVAFKAGEIDLLVATTVIEVG
                     VDVPNASLMVIENAERLGLAQLHQLRGRVGRGSAVSRCVLLYQAPLSQMARERLQTMR
                     ETNDGFVIAEKDLELRGPGELLGTRQTGLAGFRIADLARDAGLLPGVHDLAERLLAQQ
                     PALADRVVQRWIGTAVRYASA"
BASE COUNT          438 a          953 c          925 g          399 t
ORIGIN      
        1 caattgccgc tctgtttccc ccaagctccg gagcgaccca tgtcccgcca gatcatcaac
       61 accgaaaagg ctcccgccgc catcggcccg tactcgcagg ccgtgcgcgc cggcaatacc
      121 gtgtacttct ccgggcagat cccgctcgac ccggccagcg gcgacatcgt cggcgccggt
      181 gacgtcgaag cccaggcccg tcgtgccttc gacaacctca aggccgtggc cgaagccgct
      241 ggcggttcgc tggacaaggt cgtgcgcctg ggcctgtacc tgaccgatct gggcgaattc
      301 gccaaggtca acgcggtcat gcaggactac ttccaggcgc cgtacccggc ccgttccacc
      361 atcgaagtgt ccggcctgcc gaagggcgcc aacttcgagg tcgacgcggt gatggtcatc
      421 gactgaccgc cacgtggcac gcaaggcggc ggtcaccccg gtcctgtcac cgtccggcga
      481 agcatccctg gcgatgctcg ctggcgtggg cccggccgtg gccgccaaac tgcaggcgcg
      541 tggcctggcc accctgcagg atctctggct tcacctgccg ctgcgctatg aagaccgcac
      601 ccggctgacc cgcatcgaag acctgcgcaa cggcgtgccg gcgcaggtgg aagggcgggt
      661 ggtcgcggtt gaacgcggca tgcgctaccg gccgatgctg aaggtggcgg tggaggatga
      721 agggcagggc accctggtgc tgcgcttctt ccatttccgc cagcagcagg tcggccagtt
      781 cgcggtcggc aaccggctgc gctgctttgg cacgcccaag cccggccacc tcggcctgga
      841 gatcgtccac cccagctacc aggtgctggg ccgcaatgac gatcccgaac tcggcgaccg
      901 cctcgacccg gtgtatccca ccgtcgaggg cgttggcccg atgacgatgc gcaagctgat
      961 cggccaggcc ctggaccgcc tgcccgagga aagcacgctg gaactgctgc ccagtggctg
     1021 gctggacggc ctcaagctgc cctcgctgcg cagcgcgctg ctgaccgtgc accggccgcc
     1081 gccggatgcc gacctggccg cgctggccgc aggcacccat ccggcgcagc gtcgcctggc
     1141 gatggaagag ctgctggcgc accacctcag cctgcgtcgc cagcgcatcg cattgcaggc
     1201 gcatcacgcg ccgccgctgg ccggcccggg cacgctggcc aaggcactgc tgaagcagct
     1261 gccgttcgcg ctgaccggtg cgcaggcacg cgtgttcaag cagatccgcg aagacctgtc
     1321 gcggcccagc ccgatgctgc ggctggtgca gggcgacgtc ggctccggca agaccgtggt
     1381 tgccgcgctg gcggcgatgc tggcggtgga acagggcaag caggtcgcat tggcggcgcc
     1441 cactgaactg ctggccgaac agcacctcaa caacctgcgc ggctggctgg aaccgcttgg
     1501 cgtgcgcatc gcctggctgg ccggcaaggt caccggcaag gcgcgcgcca aggtgatgga
     1561 acaggtcgcc aacggcgagg cgcaggtggt ggtcggtacc cacgcgctga tgcaggacgc
     1621 ggtggtgttc caggacctgg ccctggccat cgtcgatgag cagcaccgct tcggcgtgca
     1681 ccagcgcctg gccctgcgcg acaagggcgc gggaggcaac agcgtgccgc accagctggt
     1741 gatgaccgca acgccgattc cgcgcacgct ggcgatgtcc gagtacgccg atctggacgt
     1801 gtcggccatc gacgaactac cgcccggccg caccccggtg cagaccgtgg cactcaacaa
     1861 cgaccgtcgc cccgagctga tcgagcgcat cgcgctggcc tgccgggaag ggcggcaggt
     1921 gtactgggta tgcacgctca tcgaggaaag cgaagagctg gatgcaacgc ccgcgcaggc
     1981 cacctacgaa tcgctgcagg cgctgttgcc gggcgtgcgc gtcgggctgg tgcatggccg
     2041 cctgaaggcg gccgagaagc tggcgacgat ggtggcgttc aaggccggcg agatcgacct
     2101 gctggtggcg accaccgtca tcgaagtggg cgtggacgta cccaatgcct cgctgatggt
     2161 gatcgagaac gccgagcggc tgggcctggc ccagctgcac cagctgcgtg gccgtgtcgg
     2221 ccgtggatcg gccgtgtcgc gctgcgtgct gctgtaccag gcgccgctct cgcagatggc
     2281 gcgcgagcgc ctgcagacca tgcgcgaaac caacgatggt ttcgtcatcg ccgagaagga
     2341 cctggagctg cgcggccccg gcgaactgct cggcacccgt cagaccggac tggccggatt
     2401 ccgcattgcc gacctggccc gcgacgccgg cctgctgccc ggcgtgcacg acctcgccga
     2461 acgcctgctg gcccagcaac ccgcactggc cgaccgcgtg gtgcagcgct ggatcggcac
     2521 cgccgtgcgc tacgcctcgg cgtaatgccg ccttgggtgg ggtgtggacc ttggtccaca
     2581 catccacgcc gcgcgcgtga gtcgagcatg gctcgactct acagagagcc ttttcgacca
     2641 atccatggaa gtgtcgacca aggtcgacac ctaccaacag cagcgtgtcg accaaggtcg
     2701 acacccacca gcagc
//
LOCUS       DAOKIP010000333         2714 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.340,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000333 DAOKIP010000000
VERSION     DAOKIP010000333.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 2714)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2714)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2714
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.340"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            95..1204
                     /gene="rsgA"
                     /locus_tag="QEL58_003905"
     CDS             95..1204
                     /gene="rsgA"
                     /locus_tag="QEL58_003905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010480839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome small subunit-dependent GTPase A"
                     /protein_id="HDS1678331.1"
                     /translation="MAAMTQTPDFTALQTIGWPWPGPAQQADWQAAMAAHPQARPARV
                     IEQHRTHYVVADGPDASIKAESLPEWQRPRFPSHERPAVGDWVLLDGIRIVALLPRRT
                     AIKRGAAGEHYHQQVIAANIDTVFIVCGLDADFNPRRIERYLLLVGGGGAEPVVVLTK
                     ADQTEYSEDALAVLEELEMQGIALHAINGLDADSVAVLQPWLGPGRTVVLVGSSGAGK
                     STLTNTLLGEQRMKTNAVRANDSRGRHTTTHRALMPLPTGACLIDTPGMRELKPTGEE
                     TLSEGGFADIEALAAQCRFNDCKHQQEPGCAVRAAIDAGEIEESRLLNYFKLKEEVAA
                     AAAKLAVRQAETAQERGGRKGKGQQFRPAGKPRRR"
     gene            1381..2634
                     /locus_tag="QEL58_003906"
     CDS             1381..2634
                     /locus_tag="QEL58_003906"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010480838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavohemoglobin expression-modulating QEGLA
                     motif protein"
                     /protein_id="HDS1678332.1"
                     /translation="MEPTATLDRDVAHHAALDARLVEAVGGIRLLGLTSWPATVQAPF
                     LDSVARGQPVLPKVDYPRLDFSEERRALAAIAADCDDSHPLGHYVRQSAQSWDLAAQL
                     LEGLGTAAVDTCSVQLFGAPEQPLPGNGPSTREAARHFIQIAAELDHELLAPEEQVPV
                     SAIALQLQLQNDLDAFFESRIIQVQLDPELVSKAAAGPTRIRLRTSARFSAYDRAQLF
                     HHEALVHSLTALNGREQPVLPSLALSSPRVTATQEGLATFAEQITGSIDIERLKRISL
                     RTEAIAMAREGADFIEVFRYFCDAGQNTEESFASAQRVFRGVPPSGGLAFTKDTVYLR
                     GLVSVHTFFRHMLAEDRLQVCRWLFAGKMSLTDAIAFAPLFESGVLKPPRWLPHWVSR
                     ANGLAGMLAFSLFANRIRMDQLAPE"
BASE COUNT          451 a          893 c          944 g          426 t
ORIGIN      
        1 gcatggggtt tccatcctac cggaattgct gcagtgcatg gcaagggctc agcgcctgcc
       61 gttgctgggc tggcagggca tcgggccggt tagaatggcg gcgatgaccc agacccccga
      121 tttcaccgcc ctgcagacca tcggctggcc ctggccaggc ccggcgcagc aggccgactg
      181 gcaggccgcg atggctgccc atccgcaggc ccgcccggcg cgggtgatcg aacagcaccg
      241 cacccattac gtggtggccg acggcccgga tgcatcgatc aaggccgagt cgctgccgga
      301 atggcaacgc ccgcgtttcc ccagccatga gcggccggcg gtgggcgact gggtgctgct
      361 tgatggcatc cgcatcgtcg ccctgctgcc gcgccggacc gcgatcaagc gcggtgcggc
      421 cggcgagcat taccaccagc aggtgatcgc ggccaacatc gatacggtgt tcatcgtctg
      481 cggcctggat gccgacttca atccgcgccg tatcgaacgc tacctgctgc tggttggcgg
      541 cggtggtgcc gaaccggtgg tggtgctgac caaggccgat cagactgaat acagcgaaga
      601 cgcattggcg gtgctggaag aactggagat gcagggcatc gcgctgcatg cgatcaacgg
      661 cctggatgcc gacagcgtgg cggtgctgca gccgtggctg ggcccgggcc gcacggtggt
      721 gctggtcggt tcttccggtg ccggcaagtc cacgttgacc aacaccctgc ttggcgagca
      781 gcggatgaag accaatgcgg tgcgcgccaa cgactcgcgt ggccgccaca ccaccaccca
      841 tcgcgcgctg atgccgctgc cgaccggtgc ctgcctgatc gacacccccg gcatgcgcga
      901 gttgaaaccg accggcgaag aaacgctgtc cgagggcggc ttcgccgata tcgaagcact
      961 tgccgcacag tgccgcttca acgactgcaa gcatcagcag gagccgggct gcgccgtgcg
     1021 cgcagcgatc gacgccggtg agatcgaaga gagccggctg ctgaactact tcaagctgaa
     1081 ggaagaagtg gccgccgctg ccgccaagct ggcggtgcgc caggccgaga ccgcgcagga
     1141 gcgcggcggc aggaagggca agggccagca gttccgcccg gccggcaagc cacgccggcg
     1201 ttgagccgtt tctggtaggt gccaaccttg gttggcgcgg atggatccga agcccacctc
     1261 tgcctgccct tggtaggtgc caaccttggt tggcacggaa tatgtccgac gcccgcctgc
     1321 ggggggtgcc aaccaaggtt ggcagctacc aacgcgcggg ctgggcgtta tagtccgcgc
     1381 atggaaccga ccgcgacgct ggaccgtgac gtggcccacc atgcagcgct cgatgcgcgc
     1441 ctggtcgagg ccgtgggtgg catccgcctg ctgggcctga ccagctggcc ggcgacggtg
     1501 caggcaccgt tcctggacag cgtggcgcgc ggccagccgg tgctgccgaa ggtggactat
     1561 ccgcggttgg atttcagcga ggagcgccgc gcgctggccg cgatcgccgc cgactgcgac
     1621 gacagccatc cactcggtca ttacgtgcgg cagtcggcgc agagctggga cctggccgcg
     1681 cagctgctgg aggggctggg caccgccgcc gtcgatacct gttcggtgca gctgttcggc
     1741 gcgcccgagc agccgctgcc gggcaatggc ccgagcacgc gcgaagcggc gcggcacttc
     1801 atccagatcg cggccgaact ggaccacgaa ctgctggcgc cggaagagca ggtgccggtg
     1861 tcggccattg ccctgcaact gcagctgcag aacgacctcg atgccttctt cgaatcgcgc
     1921 atcatccagg tgcagctgga tccggagctg gtctccaagg cggctgccgg cccgacccgc
     1981 atccgcctgc gcaccagtgc gcgtttcagc gcctacgacc gcgcgcagct gttccaccat
     2041 gaagcactgg tgcattcgct gaccgcattg aacggccgcg aacagccggt gctgccgagc
     2101 ctggcgctgt cgtcgccgcg ggtgaccgcg acccaggaag ggttggcgac gttcgccgaa
     2161 cagatcaccg gcagcatcga catcgagcgc ctgaaacgca tcagcctgcg taccgaagcg
     2221 attgcgatgg cgcgcgaagg cgccgatttc atcgaggtgt tccgctattt ctgcgatgcc
     2281 gggcagaaca ccgaagaaag tttcgcctcg gcgcaacgcg tgttccgcgg cgtaccgccc
     2341 agcggtggcc tggccttcac caaggacacg gtgtacctgc gtggcctggt gtcggtgcac
     2401 accttcttcc gccatatgct ggccgaagac cggctgcagg tctgccgctg gttgttcgcc
     2461 ggcaagatga gcctgaccga tgcgatcgcg ttcgcgccgc tgttcgagag tggggtgctg
     2521 aagccaccgc gctggctgcc gcactgggtg agccgggcga acggactggc cggcatgctg
     2581 gcgttctcgt tgttcgccaa ccggatacgg atggaccagc tggcgccgga atgaaatgcg
     2641 ttggcggacc cgccagcgcc tgcctgctaa cggtggggag gaggcggggc accctggcca
     2701 ggacacgcaa aagc
//
LOCUS       DAOKIP010000334         2674 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.341,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000334 DAOKIP010000000
VERSION     DAOKIP010000334.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 2674)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2674)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2674
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.341"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..>2674)
                     /locus_tag="QEL58_003907"
     CDS             complement(<1..>2674)
                     /locus_tag="QEL58_003907"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005418200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="S8 family serine peptidase"
                     /protein_id="HDS1678333.1"
                     /translation="AKPQEPAFDAHLSVTNARAAQAAGLTGQGVRIGIVDSGVQRNAV
                     ALNGRVLANLNYIDPARNNLAVDDVVGHGTAVASLAAGAAVGTWPGGIAPGAQIVSAR
                     IISDTPPTDDGSGRGNAFSGPLGVAQVHQDLISYNVKVMNNSWGGLYWTDLPTTAQVA
                     AEYRPFVINHGGLVVFAAGNDARTEPSSLAALPSQKGVAGTLPAADLERGWLVATAVD
                     PYTPGALASYANACGQAARYCLAAPGSAVYPDASGGSYYWNYGTSFAAPLISGAAALV
                     WQRFPYFNNDLVRQTLLGTAKDIGAPGVDPVFGYGLLDIGRAVKGPGRFDWGDVVANV
                     DVASTGSLWSNDIVGSGGLVKQGSGTLVLGGNNSYTGATRIERGILSLQNGGVIRSNV
                     TILGQPDPDSTGLQFNGGTPRVIGNVVNGSSVFLTTGSTTGTIEGNYTQQAGGQLMIA
                     LGANALQVTGTASINGGVRVHGFVSGYVPQSGSRQDLVHAAGGLSGTFSSPATSSGLQ
                     GLSLLQSSYGYDSNNAWLNLTQVSVTAAATGLTASAQSAAQRLEGAFSALDGSPVLQG
                     SAFGAAAGALQWTGGGRDGLAASLQSLSGQAHARAESATFDSIDMSRRAIAERFDRVQ
                     AAPRLRGTWQSALGEAGQGSFAGNSADSRGWMTGQDLALGSNGLMGVAFGETRSNGGS
                     SFDGDRGRDRQAQAQLYAGWNLGRGYALAQLGSGQFTRTLDRQLLLGAGAYGVSARYG
                     GRFSSASVEGGYRFGRAGASLTPYLGASTTRVETDAFQELGGFGFGLRGDANRVQRSQ
                     MLAGVRGERGWGRWTLRGHAEWQQRLDGADVDWQASFVGVDAWAPLAGWNTSRGSALF
                     GVALESWWGRNGRLSLGFDQRVGGEGARQAALRYS"
BASE COUNT          425 a          985 c          864 g          400 t
ORIGIN      
        1 gctgtagcgc agggccgcct gccgtgcgcc ttcgccaccg acacgctggt cgaagcccag
       61 gctcaggcgg ccattgcggc cccaccacga ttccagtgcc acgccgaaca gcgcacttcc
      121 gcgcgacgtg ttccagcccg ccagtggcgc ccaggcatcg acgccgacga aactggcctg
      181 ccaatccaca tcggcaccat cgagccgctg ctgccactcg gcatgaccgc gcagcgtcca
      241 tcgcccccat ccacgctcac cgcgcacacc ggccagcatc tggctgcgct gcacgcggtt
      301 ggcatcgcca cgcaggccga agccgaaacc acccagctcc tggaaggcgt cggtctccac
      361 acgcgtggtg ctggcgccga ggtaaggcgt cagcgacgca ccggcgcggc cgaagcgata
      421 gccgccttcc acgctggcac tgctgaagcg cccgccgtag cgcgcagaga caccgtaggc
      481 gccggcaccc agcagcagct ggcgatccag cgtgcgggtg aactggccgc tgccgagctg
      541 ggccagcgca tagccacgcc ccaggttcca gccggcatac aactgcgcct gcgcctggcg
      601 atcacgaccg cgatctccat caaaactgct gccaccgttg ctgcgggtct cgccgaaggc
      661 cacgcccatc agcccgttgc tgcccaaggc cagatcctgg ccagtcatcc agccgcggct
      721 gtcggcgctg ttgccggcga agctgccctg cccggcctcg cccaaggcgc tctgccaggt
      781 gccacgcagc cgtggtgcgg cctgaacccg atcgaagcgt tcggcgatcg cgcggcgtga
      841 catgtcgatg ctgtcgaagg tggccgactc ggcccgcgca tgcgcctgtc ccgacaggct
      901 ctgcaggctg gcggccaggc catcacgacc accgccggtc cactgcagcg cgccggccgc
      961 cgcgccgaac gccgagccct gcaggacggg actgccatcg agcgcgctga acgcaccttc
     1021 cagtcgttgc gcggcagact gcgccgaggc cgtgagcccg gtcgccgccg cagtgacgct
     1081 gacctgggtc aggttcaacc aggcattgtt gctgtcatag ccatagctgc tctgcagcag
     1141 cgacaagccc tgcaggccgc tggaggtggc cgggctgctg aaggtgccgc tcaggccacc
     1201 ggccgcatgg accaggtcct ggcggctgcc gctctgcggc acatagccgg acacgaagcc
     1261 atgcacgcgc acgccaccat tgatcgaggc ggtgccggtc acctgcagcg cattggcacc
     1321 gagcgcgatc atcagctggc cacctgcctg ctgcgtgtag ttgccctcga tggtgccggt
     1381 ggtgctgccg gtggtcagga acacgctgct gccgttgacc acgttgccga tcacccgcgg
     1441 cgtgccacca ttgaactgca ggcccgtcga atccggatcg ggctggccca ggatggtcac
     1501 gttggaacgg atgacaccgc cgttctgcag cgacaggatg ccgcgctcga tgcgggtggc
     1561 accggtgtag ctgttgttgc cgcccagcac cagggttcca ctgccctgct tgaccaggcc
     1621 gccactgccg acgatgtcgt tgctccacag cgagccggtc gaggccacat ccacgttggc
     1681 gaccacatca ccccagtcaa agcgcccggg acccttgacc gctcggccga tgtccagcag
     1741 gccataaccg aacaccgggt ccacgccagg cgcgccaatg tccttggcgg tgcccagcag
     1801 ggtctgccgc accaggtcgt tgttgaagta ggggaatcgc tgccagacca gcgccgccgc
     1861 accggagatc aacggcgcgg cgaatgacgt gccgtagttc cagtaatagc tgccaccgct
     1921 ggcatcggga tagaccgcgc tgcccggcgc tgccaggcag tagcgggccg cctggccgca
     1981 ggcattggca tagctggcca gcgcacccgg cgtgtaagga tcaaccgcgg tcgccaccag
     2041 ccagccgcgc tccaggtcgg ccgccggaag cgtgccggcc acgcctttct ggctgggcag
     2101 cgcggccagg ctgctgggtt cggtgcgcgc gtcattgccg gctgcgaaca ccaccaggcc
     2161 gccgtggttg atgacaaacg ggcggtattc ggccgccacc tgcgcggtgg tcggcaggtc
     2221 ggtccagtac aggccgcccc acgaattgtt catcaccttc acgttgtagc tgatcaggtc
     2281 ctggtggacc tgcgccacgc ccagcggacc gctgaaggca ttgccgcgcc cactgccgtc
     2341 atcggtcggc ggcgtgtcgg aaatgatccg cgcggatacg atctgcgccc ccggcgcgat
     2401 gcctcccggc cacgttccca ccgctgcacc ggcggccagg ctggccaccg cggtgccgtg
     2461 gccgaccaca tcgtcgaccg caagattgtt cctggccgga tcgatgtagt tgaggttggc
     2521 cagcacccgc ccgttcagcg ccaccgcatt gcgctgcacc cctgaatcaa cgatgccgat
     2581 gcgcacgccc tgcccggtca gaccggccgc ctgtgcggcc cgcgcgttgg tgactgacag
     2641 atgcgcatcg aaggccggct cctgcggctt ggcc
//
LOCUS       DAOKIP010000335         2648 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.342,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000335 DAOKIP010000000
VERSION     DAOKIP010000335.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 2648)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2648)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2648
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.342"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..259)
                     /locus_tag="QEL58_003908"
     CDS             complement(<1..259)
                     /locus_tag="QEL58_003908"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019337014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4129 domain-containing protein"
                     /protein_id="HDS1678334.1"
                     /translation="MRIDHLDVVLRARSSWEAMELGSALARRHARAVWGSWLLAGAPL
                     FVVFNALGWWLDAFGWAWLAMWWCKPLFERAPLYVLSRGIFG"
     gene            complement(249..1241)
                     /locus_tag="QEL58_003909"
     CDS             complement(249..1241)
                     /locus_tag="QEL58_003909"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014648779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stage II sporulation protein M"
                     /protein_id="HDS1678335.1"
                     /translation="MKQEQFVARYQQEWQDLEQWLLLRAGASRRARRKASGLALDDTA
                     FPQRYRRLCQQLALARERGYSPQLVQRLQQLMQQGHSVLYRTRPTRWRAALEFLVADF
                     PLLVRSQARSMWVALAMFALPALACFVLAQVYPDLIHMLMDNRQIAAMERMYDPAAER
                     LGRDSGTDWMMFGHYVMNNISIALRTFASGLLAGLGTLLVLSFNGVTIGAVAGHLQHI
                     GYGGPFWRFVAGHGAFELTAIVIAGGAGLQLGMKLLAPGRRSRLDALVDGGRIGARLC
                     LGVAFMLLVAAFIEAFWSSIAEVPAWGKFSVAGVLWAGVLLWLWRGGRGAGDAH"
     gene            complement(1238..1927)
                     /locus_tag="QEL58_003910"
     CDS             complement(1238..1927)
                     /locus_tag="QEL58_003910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HDS1678336.1"
                     /translation="MAAPMLDTYREVVTPEGVLLQLPAAGPLPRAMAWLVDLGVRVAV
                     LVLMSIPLALLDTFGSGLYLVLMFLVYWAYPIVCEALWGRTLGKRALGLRVLSRDGAP
                     VGWMASITRNLLRTVDMLPFGYALGLVSSLFDPHGRRLGDLVAGTVVVHAPALYLPPP
                     PTIDSVLAPPQPLRPDEQAALMAFAERAPRLSAARQQELAGIAEPLTGAQGQIGVLRL
                     YAMANWLLGRR"
     gene            complement(2051..2581)
                     /locus_tag="QEL58_003911"
     CDS             complement(2051..2581)
                     /locus_tag="QEL58_003911"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003485643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma carbonic anhydrase family protein"
                     /protein_id="HDS1678337.1"
                     /translation="MNPLRPFRDKMPVLGERVYIDPACTVIGDVELADDVSIWPGTVI
                     RGDVNYVRIGARTNVQDGTIIHVSHHSPYNKAGYPTLIGEGVTVGHGCIIHACTIGDY
                     SLIGMGACILDGARVERHGFVGAGAVIGPGKVVGEGELWVGNPARPARTLSDKEIESL
                     HYSADHYVRLKDEYLG"
BASE COUNT          452 a          948 c          893 g          355 t
ORIGIN      
        1 caccaaagat gccgcgtgac agcacgtaca acggcgcgcg ttcgaacagc ggcttgcacc
       61 accacatcgc cagccaggcc cagccgaacg catccagcca ccagcccagc gcgttgaaga
      121 ccacgaacag cggcgcgccg gccagcagcc agctgcccca caccgcacgc gcgtgacggc
      181 gggcgagggc gctgcccagc tccatggctt cccagctgct gcgtgcgcgc agcaccacgt
      241 ccaggtggtc aatgcgcatc gccggctccg cgtccgccac gccacagcca cagcagtacg
      301 ccagcccaca gcacgccggc cacgctgaac ttgccccatg ccggcacttc ggcgatcgat
      361 gaccagaacg cttcgatgaa ggcggcgacc agcagcatga aggctacgcc gaggcacagc
      421 cgtgcaccga tgcggccgcc gtcgaccagc gcatccagcc ggctgcgccg gcccggtgcc
      481 agcagcttca tgcccagctg cagtccggcg ccaccggcaa taacgatggc ggtcagctcg
      541 aacgcgccat gcccggccac gaagcgccag aacgggccgc cgtagccgat gtgctgcagg
      601 tggcccgcca ccgcaccgat ggtgacgcca ttgaaggaca gcaccagcag cgtgcccagc
      661 ccggccagca ggccactggc gaaggtgcgc agggcgatgc tgatgttgtt catgacgtag
      721 tggccgaaca tcatccagtc ggtaccgctg tcgcggccca ggcgctcggc ggcggggtcg
      781 tacatgcgct ccatcgcggc gatctggcgg ttgtccatca gcatgtggat caggtccgga
      841 tagacctggg ccagcacgaa gcaggccagt gccggcagcg cgaacatcgc cagcgccacc
      901 cacatgctgc gcgcctggct gcggaccagc agcgggaagt cggccaccag gaattccagc
      961 gcggcgcgcc agcgcgttgg acgcgtgcgg tacagcacgc tgtggccctg ctgcatcagc
     1021 tgctgcaggc gctgcaccag ctgtgggctg tagccgcgct cgcgggccag cgccagctgc
     1081 tggcacaggc gccggtaacg ctgcgggaag gcagtgtcat ccagtgccag gccgctggcc
     1141 ttgcggcggg cgcggcgcga ggcaccggca cgcagcagca gccactgctc caggtcctgc
     1201 cattcctgct ggtagcgggc gacgaactgt tcctgcttca tcgccgcccc agcagccaat
     1261 tggccatggc atacaggcgc agcacgccga tctggccctg cgcaccggtc agcggctcgg
     1321 cgattccggc cagttcctgc tggcgcgccg ccgacagccg cggcgcgcgt tcggcgaagg
     1381 ccatcaacgc cgcctgttca tccgggcgca gcggctgcgg cggggccagc acgctgtcga
     1441 tggtcggcgg cggcggcagg tacagcgccg gcgcatgcac caccaccgtg ccggcgacca
     1501 ggtcgccgag gcggcggcca tgggggtcga acaggctgct gacgaggccc agtgcatagc
     1561 cgaacggcag catgtccacg gtacgcagca ggttgcgggt gatcgatgcc atccagccga
     1621 ccggcgcgcc atcgcgcgac agcacgcgca gccccagcgc gcgcttgccg agggtgcggc
     1681 cccacagcgc ctcgcagacg atcgggtagg cccagtagac caggaacatc agcaccaggt
     1741 agaggccgga accgaacgtg tccagcagcg ccagcggaat cgacatcagc accagcacgg
     1801 cgacgcgcac gccaagatcg accagccagg ccatcgcccg cggcagcggg ccggccgccg
     1861 gcaactgcag cagcacgccc tccggcgtca ccacctcgcg gtaggtgtcg agcatcggtg
     1921 cggccatcag cgcgatggcc ttcgatgtgg gcgccggagt cctctccggc aggcagccac
     1981 aggcatgggg gtctcgacag atcctggtcg ggcccagact ttagcagagc cgcatggcgg
     2041 cgttggccgc tcagcccagg tattcgtcct tcagccgcac gtagtggtcg gccgagtagt
     2101 gcagcgactc gatctccttg tcgctcagcg tgcgcgccgg ccgcgccggg ttgccgaccc
     2161 acagttcgcc ctcgccgacc accttgcccg ggccgatcac ggcaccggca ccgacgaagc
     2221 cgtggcgctc cacccgggcc ccgtcgagga tgcaggcgcc catgccgatc aggctgtaat
     2281 caccgatcgt gcaggcatgg atgatgcagc catggccgac ggtgacgccc tcgccgatca
     2341 gcgtcgggta gccggccttg ttgtacgggc tgtggtggct gacgtggatg atggtgccgt
     2401 cctgcacgtt ggtgcgtgca ccgatacgca cgtagttgac gtcgccacgg atgaccgtgc
     2461 ccggccagat cgacacgtcg tcggccagtt ccacgtcacc gatgacggtg caggccggat
     2521 cgatgtacac gcgctcgccg aggacgggca tcttgtcgcg gaaggggcgc agcgggttca
     2581 tcggtgtctc cgaaaatcag ggcattcgcg acgatgatac ctgcgtggtc cgcacgccgc
     2641 gtgcctgc
//
LOCUS       DAOKIP010000336         2624 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.343,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000336 DAOKIP010000000
VERSION     DAOKIP010000336.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 2624)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2624)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2624
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.343"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            97..2622
                     /locus_tag="QEL58_003912"
     CDS             97..2622
                     /locus_tag="QEL58_003912"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005916508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite reductase flavoprotein subunit alpha"
                     /protein_id="HDS1678338.1"
                     /translation="MFKNILFQVHWLLGITAGAILAVMGLSGAVLSFEDELLRAANPG
                     FAAIAEHHADSQLPLTLSELVPRLQAGSERPLQRLRVDATGQRPSVARFAGGKEHWVY
                     FDPYSGERFSALRGQAFFDFVEDLHRHLAAGERGKWITGSCAIALLFFTLSGLYLRWP
                     RRWWHWRSWLAVEWKRSGRGFLWSLHSVVGTWVLLIYLMSALTGLWWSFDWYRSAANS
                     VLGVAPAAKHTVAIDAPLDLQRVEATLYALPGVRTGFIDLRLPEKPGQALNVRVMAGD
                     PSQRGGHHDRAHDLLQLDPASGAVLDSRPYDRQGAGGQLATSVFALHSGSYFGLPGRV
                     VVMLSSLGMSLFFITGWMLYLDRRRSQRAARGLRQSLPMPAATDGHGAPWLVVHASQS
                     GLAEQLAWRAAAQLQAAGSAVQVLPLSRIDAAKLQATSQALLVLSTFGDGEPPDAARR
                     AARLLLAQAPDLSGLQFGLLALGDRQYPHYCGFGRQVDGWLTGNGARALFARIDVDAA
                     SVPALRQWQLQLGALTGIATDDSVLPPATRMHDWRLLGRDRLNPGSVGGAIWRIRLAA
                     PADVQWQAGDILHIAPRHSARHAGAVLKAHGLDPLQPLLVDGAPRTLLALASERELPD
                     ADAALPVQDACLWLSGLPMLPGREYSIASAAHDGEVELVVRLVQDAVGRAGLGSGWLS
                     LHAPIGASVVARVHHNPGFHRVPAAPMVLVGNGTGIAGLRSLLRESAHAGEHGHWLLF
                     GERQRAHDLLFADEIEAWQAQGHLARVDLAFSRDGGGGYVQDRLHAAADVLRDWMQRG
                     AVIHVCGSLQGMAEGVDQVLRTALGDDAVETLLENGRYRRDVY"
BASE COUNT          344 a          886 c          945 g          449 t
ORIGIN      
        1 tgaccgcagc cagggggcca cggaaaattc cgcgattaat tctcatttgc tgttgcgcag
       61 gatgcgggcg gcagccttcc aggccctcct ccttcgatgt tcaagaacat cctgttccaa
      121 gtgcactggc tgctgggcat caccgccggt gccatcctgg ccgtgatggg cctcagtggt
      181 gccgtgctgt ccttcgagga cgaactgctg cgtgcggcca accccggctt tgcggccatc
      241 gccgaacacc acgccgacag ccagcttccg ctcacgctca gcgagctggt gccgcggctg
      301 caggccggca gcgaacgccc gctgcaacgc ctgcgcgtcg acgccaccgg gcagcggccg
      361 tcggtcgcgc gctttgccgg cggcaaagag cattgggtgt atttcgaccc gtacagcggc
      421 gagcgcttca gtgccctgcg cggccaggcg ttcttcgatt tcgtcgaaga cctgcatcgt
      481 catctcgcgg ccggcgaacg cggcaagtgg atcaccggca gctgtgcgat cgcgctgctg
      541 ttcttcaccc tgtccgggct ctacctgcgc tggccacggc gctggtggca ctggcgcagc
      601 tggctggcgg tggagtggaa acgcagtggc cgcggtttcc tgtggagcct gcattcggtg
      661 gtcggcacct gggtgctgtt gatctacctg atgagcgcat tgaccggcct gtggtggtcg
      721 ttcgactggt accgcagcgc cgccaacagc gtgttgggcg tcgcgccggc ggccaagcat
      781 acggtggcca tcgatgcccc gctggacctg caacgcgtcg aagccacgct gtatgccttg
      841 cccggcgtgc gcaccggctt catcgacctg cgcttgccgg aaaaaccggg ccaggcgctc
      901 aacgtgcggg tgatggccgg tgatccgtcg cagcgcggag ggcaccatga tcgcgcgcat
      961 gatctgctgc agctggaccc ggccagcggc gcggtgctcg attcccgccc ctacgatcgc
     1021 cagggcgcgg gcggccagct ggccaccagc gtgttcgcgc tgcactcggg cagctacttc
     1081 ggcctgcccg ggcgcgtggt ggtgatgctc agcagcctgg gcatgagcct gttcttcatc
     1141 accggctgga tgttgtacct ggatcgccgc cgcagccaac gcgcggcacg cgggctgcgc
     1201 cagtcgctgc cgatgccagc cgccaccgat ggccatggcg cgccgtggct ggtggtgcat
     1261 gccagccaga gcggcctggc cgaacagctc gcatggcgtg cggccgcgca gctgcaggcg
     1321 gccggtagcg cggtgcaggt gctgccgttg tcgcgcatcg atgccgcgaa gctgcaggcc
     1381 acatcgcagg cgctgctcgt gttgagcacc ttcggcgacg gtgaaccgcc ggatgcggcc
     1441 cgacgcgcgg cacgcctgtt gctcgcgcag gcaccggacc tgtcggggct gcagttcggc
     1501 ctgctcgcgc tgggggatcg ccagtatccg cactactgcg gcttcggccg ccaggtcgat
     1561 ggctggctga ccggcaacgg tgcacgtgcg ctgttcgcgc gcatcgatgt cgatgccgcc
     1621 tcggtgccgg ccctgcgcca gtggcagctg caactgggcg cactgaccgg catcgccacc
     1681 gatgacagtg tgctgccgcc cgcaacgcgg atgcacgact ggcgcctgct cggccgcgac
     1741 cgcctcaacc cgggcagcgt cggcggcgcg atctggcgta tccgtcttgc cgccccggcc
     1801 gatgtgcagt ggcaggccgg tgacatcctg catatcgcgc cccgccacag cgcgcggcat
     1861 gcgggtgccg tgctgaaggc gcatggactg gatccgctgc aaccgctgct ggttgacggc
     1921 gcgccgcgca cgctgctggc gctggccagc gaacgcgagc tgccggacgc cgatgccgcg
     1981 ttgcccgtgc aggatgcctg cctgtggttg tccgggctgc cgatgctgcc cggccgcgag
     2041 tactcgatcg cctccgccgc gcacgacggc gaggtggagc tggtggtcag gctggtgcag
     2101 gacgccgtcg gtcgtgccgg gctgggttcg ggctggttgt cgctgcatgc gccgatcggc
     2161 gccagcgtcg tggcccgcgt gcatcacaat ccaggtttcc atcgggtgcc tgccgcgccg
     2221 atggtgctgg tcggcaacgg caccggcatc gccggcctgc gcagcctgct gcgcgagtcc
     2281 gcgcatgcag gcgagcacgg gcactggctg ctgtttggcg agcgccagcg cgcgcacgac
     2341 ctgctgtttg ccgacgagat cgaggcctgg caggcgcagg gccatctggc gcgggtggac
     2401 ctggcgttct cgcgcgatgg cggagggggc tatgtgcagg atcgcctgca cgccgccgcc
     2461 gatgtgctgc gcgactggat gcagcgcggc gcggtaatcc acgtctgtgg ctcgctgcag
     2521 ggcatggccg aaggcgtgga ccaggtgctg cgcactgcgc tgggcgatga tgcggtggaa
     2581 acgctgctgg agaacgggcg ctaccgccgc gacgtgtact gagt
//
LOCUS       DAOKIP010000337         2605 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.344,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000337 DAOKIP010000000
VERSION     DAOKIP010000337.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 2605)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2605)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2605
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.344"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(4..2034)
                     /locus_tag="QEL58_003913"
     CDS             complement(4..2034)
                     /locus_tag="QEL58_003913"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005411110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M3 family metallopeptidase"
                     /protein_id="HDS1678339.1"
                     /translation="MTAANPLLDFSGLPRFEAIRPEHVAPALDVLLAEAEAAVSAAEQ
                     VQPVRWESFVAPLDDATERLWRAWGLVGHLQGVVNTPELREAYNSNLPRVTRFASALG
                     QNLALYRQYQALAASPEAAGFDEARRKVLDNTLRDFRLGGAELAPEAQQRFAEIKEEL
                     SALSAKFSQNVLDATDAWSLIIEDEARLAGLPEDVKAAAHAAAEKDGKQGWKLTLQMP
                     CYLPVQTWAEDRDLREILYRASAQRASEFGDDALDNSGNIDRILALRAELAALLGFAS
                     YGDYSVATKMAQDPAEVLGFLRDLATRAKPFAAKDRAELEQFAREQLGIDSLQAWDLA
                     FAADRLKQARYSYSEQDVKQYFTEPKVLGGLFSVIEQLYGLRAQEDGAPVWHEDVRFF
                     RLVDAQGALVGQFYLDLYAREGKRGGAWMDDCRNRRVRADGSVQTPLVYLVCNFGRGA
                     NGKPATFSHNEVTTLFHEMGHGLHQLLTRIGELGVAGINGVEWDAVELPSQFMENFCW
                     EWDHLQGMTAHVDSGEPLPRALYERMLAARNFHSGMATVRQLEFGLFDMLLHSQFEPA
                     QDSVLALLDRVRADVAVNHPPVWNRFPHQFSHIFAGGYAAGYYSYKWAEVLSADAYAA
                     FEEAPQALAETGARFRDEILSRGGSRPAAENFKAFRGRAPQIDALLRHSGMA"
     gene            2205..>2605
                     /locus_tag="QEL58_003914"
     CDS             2205..>2605
                     /locus_tag="QEL58_003914"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014038551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1678340.1"
                     /translation="MEGLAAVASAPAARSLALSASPAELTWIAALCDAGDDAPRHLQQ
                     LQAVLQQGGTFNDAQEWYPFEVIERGASQLQLGHEREFVICVLLWLQALAQGRASTLD
                     PSLHLDDRAMDIEALPDALRDAVLDAFTAAG"
BASE COUNT          411 a          892 c          877 g          425 t
ORIGIN      
        1 ggtttacgcc atgcccgaat ggcgcagcag cgcgtcgatc tgcggcgcgc ggccacggaa
       61 ggccttgaag ttctccgcag ccggacggct gccgccgcgc gacaggattt catcgcggaa
      121 gcgcgcaccg gtttcagcca gtgcctgcgg tgcttcctcg aacgcggcgt aggcatcggc
      181 gctgagcacc tcggcccact tgtagctgta gtaacccgcc gcgtagccac cggcgaaaat
      241 gtggctgaac tggtgcggga agcggttcca gaccggcgga tggttcaccg ccacgtccgc
      301 acgcacgcga tcgagcagcg cgagaacgct gtcctgcgcc ggctcgaact ggctgtgcag
      361 cagcatgtcg aacaggccga attccagctg gcgcacggtg gccatgccgc tgtggaaatt
      421 gcgggcggcc agcatgcgct cgtacagcgc gcgcggcagc ggttcgccgc tatcgacgtg
      481 cgcggtcatg ccctgcaggt ggtcccattc ccagcagaag ttctccatga actggctcgg
      541 cagttccacc gcatcccact ccacgccatt gatgccggcc acgcccagtt caccgatgcg
      601 ggtcagcagc tggtgcaggc catggcccat ttcatggaac agggtggtca cttcgttgtg
      661 gctgaaggtg gccggtttgc cgttggcgcc gcgaccaaag ttgcatacca gatagaccag
      721 cggcgtctgc acgctgccgt cggcacgcac gcgacggttg cggcaatcat ccatccacgc
      781 gccaccccgc ttgccttcgc gcgcatacag atccaggtag aactggccga ccagcgcgcc
      841 ctgcgcatcg accagacgga agaagcgcac atcctcatgc cagaccggcg cgccgtcttc
      901 ctgcgcgcgc aggccgtaca gctgctcgat caccgagaac aggccgccca gtaccttcgg
      961 ttcggtgaag tactgcttca cgtcctgctc ggaatagctg tagcgcgcct gcttcaggcg
     1021 gtcggcggcg aacgccaggt cccaggcctg caggctgtcg atgcccagct gttcacgcgc
     1081 gaactgctcc agctcggcgc gatccttggc cgcgaacggc ttggcacgcg tggccaggtc
     1141 acgcaggaaa cccagcacct cggccgggtc ctgcgccatc ttggtcgcta ccgaataatc
     1201 gccgtaggaa gcgaagccga gcagcgcggc cagctccgca cgcagggcca ggatgcggtc
     1261 aatgttgccg ctgttgtcca gcgcgtcgtc gccgaattcg gacgcacgct gcgcactggc
     1321 acggtacagg atctcgcgca ggtcacggtc ttcggcccag gtctgcaccg gcaggtagca
     1381 cggcatctgc agggtcagct tccagccctg ctttccgtcc ttttccgccg cagcgtgcgc
     1441 ggcggccttc acgtcctccg gcaggccggc caggcgcgct tcatcctcga tgatcagcga
     1501 ccacgcatcg gtggcgtcca gcacgttctg cgagaacttc gccgacagcg ccgacagttc
     1561 ctccttgatc tctgcgaagc gctgctgcgc ctcgggcgcc agctcggcac cacccaggcg
     1621 gaaatcacgc agggtgttgt ccagcacctt gcgccgggcc tcgtcgaaac ctgcggcctc
     1681 cgggctggcg gccagcgcct ggtactggcg gtacagcgcc aggttctggc ccagcgcgct
     1741 ggcgaagcgg gtcacccgcg gcaggttgct gttgtacgcc tcacgcagtt ccggggtgtt
     1801 gaccacgccc tgcaggtggc cgaccaggcc ccaggcgcgc cacaggcgct cggtggcatc
     1861 gtccagcggg gcgacgaagc tctcccagcg caccggctgc acctgctcgg cggcgctgac
     1921 ggccgcttcg gcctcggcca gcagcacatc cagcgccggc gccacgtgct cggggcggat
     1981 cgcctcgaag cgcggcaggc cggaaaaatc gagcaggggg ttggcagcgg tcacggcaga
     2041 tctccagggt acgggcccgg caggcgggca gcctggtaca tatggcgctg gcgggcgtgg
     2101 ctgacaaggg ggtgacgcct ggcattcacg tcggccttac ggtcgcggtt cgaagctttg
     2161 gctgcggggg agtccgcagc ggtacgtacc gaacgaggcc ctacatggaa ggtctggctg
     2221 cagttgcatc cgccccagcg gcgcggtcac tggcgttgtc tgccagcccg gccgaactga
     2281 cctggatcgc cgcgctgtgc gatgccggcg acgacgcccc gcgccacctg cagcagctgc
     2341 aggcggtgct gcagcagggc ggcacgttca atgacgccca ggagtggtac ccgttcgagg
     2401 tgatcgagcg cggagccagc cagctgcagc tgggccatga acgcgagttc gtgatctgcg
     2461 tgctgctgtg gctgcaggcc ctggcccagg gccgcgccag cacgctggac cccagcctgc
     2521 acctggatga tcgcgcgatg gacatcgagg cgctgcccga tgccttgcgt gatgcggtgc
     2581 tggatgcgtt caccgcggcg gggta
//
LOCUS       DAOKIP010000338         2560 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.345,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000338 DAOKIP010000000
VERSION     DAOKIP010000338.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 2560)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2560)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2560
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.345"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..886)
                     /locus_tag="QEL58_003915"
     CDS             complement(<1..886)
                     /locus_tag="QEL58_003915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012478769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HDS1678341.1"
                     /translation="MRDLPGYPAHPQRFDVRPGLSMNYLDEGPRDGEVVVMVHGNPSW
                     SYYWRTLVAGLSDKYRCIVPDHIGMGLSDKPDDSRYEYTLQSRVDDLDALLKHLGITG
                     PVTLAVHDWGGMIGFGWALSHHEQVKRLVVLNTAAFPMPAAKTMPWQIALGRHWKIGE
                     WIIRTFNAFSSGASWLGVERKMPADVRRAYVSPYNSYANRISTIRFMQDIPLSPADKA
                     WSLLERAGKALPSFADRPAFLGWGLRDFVFDHHFLKGFQAALPQAQVHAFEDAGHYVL
                     EDKHDVLVPEIRAFLDNNP"
     gene            complement(1027..2043)
                     /locus_tag="QEL58_003916"
     CDS             complement(1027..2043)
                     /locus_tag="QEL58_003916"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002809874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-ACP synthase III"
                     /protein_id="HDS1678342.1"
                     /translation="MLFKNVSIAGLAHVDAPHTLTTKEINERLQPTLDRLGIRTDVLG
                     DIAGIHARRLWDNGVLASDAATMAGRKALEDAGITATQVGLLVNTSVSRDYLEPSTAS
                     IVSGNLGVSDECMTFDVANACLAFINGMDIAARMIERGDIDYALVVDGETANLVYEKT
                     LERMTAPDVTADDFRNELAALTTGSGAAAMVMARSELVPDAPRYKGGVTRSATEWNQL
                     CLGNLDRMVTDTRLLLIEGIKLAQKTFTAAKIALGWAVEELDQFVIHQVSQPHTAAFI
                     KNFGIDPKKVMTIFGEHGNIGPASVPIVLSKLKQLGKLKKGDRIALLGIGSGLNCSMA
                     EVVW"
     gene            complement(2146..2463)
                     /locus_tag="QEL58_003917"
     CDS             complement(2146..2463)
                     /locus_tag="QEL58_003917"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003488921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4156 domain-containing protein"
                     /protein_id="HDS1678343.1"
                     /translation="MRVLLLSSLLLTVTACTWVPIEPAGKATRVLPAGPVPAGCIAKG
                     EVVVTVKSKVGFYNRNPLRVQEELETLARNEAPSAGANAVQAAAAPADGSQRFAAFQC
                     PPR"
BASE COUNT          411 a          815 c          894 g          440 t
ORIGIN      
        1 tcgggttgtt gtcgaggaac gcgcggattt ccggcaccag cacgtcgtgc ttgtcttcca
       61 gcacgtaatg gccggcatcc tcgaaggcat gcacctgggc ctgcggcagc gcggcctgga
      121 agcccttcag gaaatgatgg tcgaacacga agtcgcgcag gccccagccg aggaaggccg
      181 ggcggtcggc gaacgacggc agcgccttgc cggcgcgctc cagcagcgac caggccttgt
      241 cggccggtga cagcgggatg tcctgcatga agcggatggt gctgatgcgg ttggcgtagc
      301 tgttgtacgg cgacacatag gcacggcgca catcggccgg catcttccgt tccacgccca
      361 gccacgaggc gccggacgag aacgcgttga aggtgcggat gatccactca ccgatcttcc
      421 agtggcggcc cagcgcgatc tgccacggca tcgtcttcgc cgccggcatc gggaacgcgg
      481 cggtgttgag caccaccagg cgcttcacct gctcgtggtg cgacagcgcc cagccgaaac
      541 cgatcatgcc gccccagtcg tgcacggcca gggtcaccgg gccggtgatg cccagatgct
      601 tcagcagcgc atcgaggtcg tccacgcgcg actgcagggt gtattcgtag cggctgtcgt
      661 ccggcttgtc cgacaggccc atgccgatgt ggtccggcac gatgcagcgg tacttgtccg
      721 acaggccggc caccagcgtg cgccagtagt agctccacga cggattgccg tgcaccatca
      781 ccaccacttc gccgtcgcgc gggccttcgt cgagatagtt catcgacagg ccggggcgca
      841 cgtcgaaacg ctgcgggtgg gcggggtaac cgggaagatc gcgcatgcgg agcacctagg
      901 gagaatcgcg gcgcggtata gagccgagcc gatgttcggc tgctctccgg tccgctgcgg
      961 aagagccgcg ctgcgcgcgt gagccgagca tggctcggct ctacaggagg tcgggcagcg
     1021 ggctgcttac cagaccactt cagccatcga gcagttcagg cccgagccga tgcccagaag
     1081 cgcgatgcga tcgcccttct tcagcttgcc cagctgcttg agcttgctca gcacgatcgg
     1141 caccgaggcc ggaccgatgt tgccgtgctc gccgaagatg gtcatgacct tcttcgggtc
     1201 gataccgaag ttcttgatga acgcagcggt gtgcggctgg ctgacctggt ggatcacgaa
     1261 ctggtccagc tcttccacgg cccagcccaa ggcgatcttg gcggcagtga aggtcttctg
     1321 ggccagcttg atgccttcga tcagcagcag gcgggtgtcg gtgaccatgc ggtccaggtt
     1381 gcccaggcac agctggttcc actcggtggc cgagcgggtc acgccgccct tgtagcgcgg
     1441 ggcgtccggc accagttccg agcgcgccat caccatcgcg gcggcgcccg aaccggtggt
     1501 cagcgcggcc agctcgttgc ggaaatcgtc ggcggtgacg tccggggcgg tcatgcgctc
     1561 cagggtcttc tcgtacacca ggttggcggt ttcgccatcc accaccagcg cgtagtcgat
     1621 gtcgccgcgc tcgatcatgc gcgcggcgat atccatgccg ttgatgaagg ccaggcaggc
     1681 attggcgacg tcgaaggtca tgcactcgtc gctgacgcca aggttgccgg agacgatcga
     1741 cgccgtggac ggctccaggt aatcgcggct gaccgaggtg ttgaccagca ggccgacctg
     1801 ggtcgcggtg atgcccgcgt cttccagcgc cttgcgcccg gccatggtgg ccgcatcgga
     1861 ggccagcacg ccgttgtccc acaggcggcg cgcgtggatg ccggcgatgt cgccgagcac
     1921 gtcggtgcgg atacccaggc ggtccagcgt cggctgcagc cgctcgttga tttccttggt
     1981 cgtcagcgta tgcggcgcgt cgacgtgtgc caggccggcg atcgagacat tcttgaagag
     2041 catcgaggtt agcgccaagg ctcaggcaaa agggggcgct attctataac tcccgggctt
     2101 tcaccgcatc tttacgaatt caggcttgcc cgtatggtga agcgttcagc gcggcgggca
     2161 ctggaacgcg gcgaagcgct ggctgccgtc ggctggagcc gcggcggcct gcacggcgtt
     2221 ggcgccggca ctcggggcct cgttgcgggc cagggtttcc agctcttcct gcacgcgcag
     2281 cgggttgcgg ttgtagaagc cgaccttgct cttcacggtg accaccacct cgcccttggc
     2341 gatgcagccg gccggaaccg ggcctgccgg cagcacgcgg gtcgccttgc cggccggttc
     2401 gatcggcacc caggtgcagg cggtgacggt gagcagcagg gaggaaagca gcagaacgcg
     2461 catgggcaga tcctggaagg gtatgggggg attctgcctg aacagcctga atcgggggta
     2521 gccgggctcg gggtcggatc ccccgcaggg ggctctgacc
//
LOCUS       DAOKIP010000339         2537 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.346,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000339 DAOKIP010000000
VERSION     DAOKIP010000339.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 2537)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2537)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2537
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.346"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(1..1986)
                     /locus_tag="QEL58_003918"
     CDS             complement(1..1986)
                     /locus_tag="QEL58_003918"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012512102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase SLT domain-containing protein"
                     /protein_id="HDS1678344.1"
                     /translation="MLGAMTRRSSTALSLLPLATTLLIGCANAQSLDAQNAQLKAAIA
                     AAERGQFDPGQAGALSRHPAYGWLEYANLRRNIDTVDTAQAQAFLKRYDGQAVATTFR
                     SVWLPSVARRQDWPTLLANWAPTDNAGLRCAQLTARQVTGKVDPQWISEAQDLWRKNG
                     KSLPDGCDAVFAVLQAQGGLSDALRWERIDAAADAQQPAVMRSAARGLPATDLALANT
                     YAAFVDKPNASALNWPRNERSRRIATDGLAKLAKADPGATEQQLPQYAQALGLSADQQ
                     GQVLYQIALWTVASYLPESARRLNAVPESAYDERLHEWRVREAMSRGDWPAALTALRK
                     MGSKQRSDPRWRYFEGRMLEKTGQAQQAQALFRDAARAPTFHGFLAADKLQQGYTLCP
                     WKPNDSAQAQAVIARDPAIQRAMALYQIDRTGWAVAEWNSALSRFDDTQRRLAVRVAQ
                     DNGWFDRAVFALGKQPQEQRLYDLRFPLHHDATIRRESARNAIDPAWVAAEIRAESTF
                     TPRARSPANAMGLMQVLPATGAGVAKSIGLTGYGGADSLYDPDTNIAIGTAYLRQLMN
                     KYDGLPYVTIAAYNAGPTPTARWQGQRPGFDPDLWIETISYKETREYVARVLAFSVIY
                     DWRLNGDALPLSDRLMGRLVDKRKSFSCAANADQGGD"
     gene            2138..>2537
                     /locus_tag="QEL58_003919"
     CDS             2138..>2537
                     /locus_tag="QEL58_003919"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017155972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biopolymer transporter ExbD"
                     /protein_id="HDS1678345.1"
                     /translation="MAFSSAGRSGPLAEINVTPLVDVMLVLLIIFIVTAPIVARPIAV
                     QLPQTTDRTIDRPEPPAPIELRLDASNQLSWDGQPMAIGDLQARLQAQAGEHAGNLPE
                     LRIATDPAAEYEGMARILAAAEATGMERIAF"
BASE COUNT          356 a          832 c          930 g          419 t
ORIGIN      
        1 tcaatcgccg ccctggtcgg cgttggcagc gcagctgaag ctcttgcgct tgtccaccag
       61 gcggcccatc aggcggtcgc tcagtggcag cgcatcgcca ttgaggcgcc agtcgtagat
      121 cacgctgaag gccagcacgc gggccacgta ctcacgggtt tccttgtagc tgatcgtctc
      181 gatccacagg tccggatcga agcccggtcg ctggccctgc cagcgggcgg tcggggtcgg
      241 gccggcgttg taggcggcta tggtcacgta cggcaggccg tcgtacttgt tcatcagctg
      301 gcgcaggtac gcggtaccga tggcgatgtt ggtgtccggg tcgtacaggc tgtcggcacc
      361 gccgtagccg gtgaggccga tcgacttggc cacgccggca ccggtggccg gcaagacctg
      421 catcaggccc atcgcgttgg caggcgagcg cgcgcgcggg gtgaaggtgc tctccgcgcg
      481 gatctccgcc gccacccagg ccgggtcgat ggcgttgcgt gccgattcgc ggcggatggt
      541 ggcgtcgtgg tgcagcggga agcgcaggtc gtacaggcgc tgttcctgcg gctgcttgcc
      601 gagtgcgaac acggcgcggt cgaaccagcc gttgtcctgc gccacgcgca cggcaaggcg
      661 gcgctgggtg tcatcgaagc gcgacagcgc actgttccat tcggccacgg cccagccggt
      721 gcggtcgatc tggtacagcg ccatcgcacg ctggatggcc gggtcgcgcg cgatcacggc
      781 ctgcgcctgc gcgctgtcgt tcggcttcca cgggcacagc gtatagccct gctgcagctt
      841 gtcggcggcg aggaagccgt ggaaggtggg ggcgcgtgcg gcatcgcgga acagcgcctg
      901 ggcctgctgt gcctggccgg tcttctccag catgcggcct tcgaagtagc gccagcgcgg
      961 gtcgctgcgt tgcttgctgc ccatcttgcg cagcgcggtc agtgccgccg gccagtcgcc
     1021 acgcgacatg gcctcgcgca cgcgccattc gtgcaaccgc tcgtcatacg cggactccgg
     1081 cactgcattg aggcggcgcg ccgactccgg cagataggag gccaccgtcc acagcgcgat
     1141 ctggtacagc acctggccct gctggtcggc actcaggccg agggcctgcg cgtactgcgg
     1201 cagctgctgc tcggtggcgc ccgggtcggc cttggccagc ttggccaggc catcggtggc
     1261 gatgcgccgg ctgcgctcgt tgcgcggcca gttcagtgcg ctggcgttgg gtttgtcgac
     1321 gaacgcggcg tacgtgttgg ccagtgccag gtcggtggcg ggcaggccgc gcgccgcact
     1381 gcgcatcacc gccggctgct gcgcgtcggc ggcggcgtcg atgcgctccc agcgcagcgc
     1441 gtcactcaac ccgccctgcg cctgcagcac ggcgaaaacc gcatcgcagc catcgggcaa
     1501 ggatttgccg ttcttgcgcc acaggtcctg tgcctcgctg atccattgcg gatcgacctt
     1561 gccggtcacc tggcgcgcgg tcagctgtgc gcagcgcagg ccggcgttgt cggtgggcgc
     1621 ccagttggcc agcagggtcg gccagtcctg gcggcgcgcg accgaaggca gccacacgct
     1681 gcggaaggtg gtggccacgg cttggccgtc gtagcgcttg aggaaggcct gtgcctgtgc
     1741 ggtatcgacg gtatcgatgt tgcggcgcag gttggcgtac tccagccagc cataggccgg
     1801 gtggcggctg agcgcaccgg cctggccggg atcgaactgg ccgcgctcgg cggcagcgat
     1861 ggcggctttc agctgcgcat tctgggcatc gagggactgg gcattggcgc agccgatcag
     1921 cagcgtggtg gccaagggca gcagggacag ggcggtcgaa gagcgtcggg tcatggcgcc
     1981 cagcatagcg ggcgctggct gaattcagtt tcgcattgcg tgcacgccgc agctcggcaa
     2041 cggcagctga atgttccgga taccggcact gccattcggg gcggcacgcg ccgtagtgtc
     2101 ggccttgggc gaacggcccg gctgcaggga gcggcacatg gcgttcagta gcgcaggacg
     2161 aagcggccca ctggcggaga tcaatgtcac gccactggtg gatgtgatgc tggtgctgtt
     2221 gatcatcttc atcgtgaccg cgccgatcgt ggcccggccg attgccgtgc agttgccaca
     2281 gaccaccgat cgcacgatcg atcgccccga accgccagcg ccgatcgagc tgcgcctgga
     2341 tgcgtccaac cagctgagct gggacgggca accgatggcg atcggcgatc tgcaggcgcg
     2401 cctgcaggcg caggcgggcg agcacgccgg caacctgccg gagctgcgta tcgccaccga
     2461 tccggcggcc gaatacgaag gcatggccag gatcctcgcc gccgccgagg cgaccggcat
     2521 ggagcgcatc gccttcg
//
LOCUS       DAOKIP010000340         2535 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.347,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000340 DAOKIP010000000
VERSION     DAOKIP010000340.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 2535)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2535)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2535
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.347"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            286..1461
                     /locus_tag="QEL58_003920"
     CDS             286..1461
                     /locus_tag="QEL58_003920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005911622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiolase family protein"
                     /protein_id="HDS1678346.1"
                     /translation="MSNIVIAAAKRTAIGSFLGQFNGVPTPTLGAAVIRAALEQSGVP
                     ASDVSEVLMGCVLPANLGQAPARQAAIAAGIPLSVGATTLNKVCGSGMKTIMLGHDLI
                     KAGSASIVVAGGMESMSNAPHMLPNSRTGNRFGNFQAVDHMAHDGLVNAYDGKAMGEF
                     AECAVDKYQFSREEQDAYAIESVKRAQAAQANGAFADEIVAVKVATRKGEIEVATDEQ
                     PGRSDIAKIPTLRPAFKKDGSVTAASSSSISDGAAAVVLLTEEDAAARGITPLARIVG
                     HATHSQEPEWFTTAPIGALHTLLDKTGWSLDQVDLFEINEAFAVVAMAPMRELGIPHD
                     KLNVNGGACALGHPIGASGARLVVTLVNALRTRGGKRGIATLCIGGGEATAIAIELI"
     gene            1586..1927
                     /locus_tag="QEL58_003921"
     CDS             1586..1927
                     /locus_tag="QEL58_003921"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014038070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1678347.1"
                     /translation="MSINKLLVAMSLALALAACSKQEAAQDAAASANEAATEAQAAAD
                     QAAAAGAQTADAAQQAADTAATAADASVDAAAQAGAAATDAAAGAAADAAKAAEGTAE
                     KAKDAAEEAKK"
     gene            2085..2495
                     /locus_tag="QEL58_003922"
     CDS             2085..2495
                     /locus_tag="QEL58_003922"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006461120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1678348.1"
                     /translation="MKIRPITTTLLAASLLLALAACKGPEAEQAKQDAQQAADSAGAA
                     ARDAVDKAAAATREAADKTAAASEQAAADTQQALDKAADATANAADKAKDAATDAAAH
                     ASDATANAAQKVADKARDVANDAKANAAKEEAKH"
BASE COUNT          465 a          921 c          767 g          382 t
ORIGIN      
        1 atcgatgcgt acattgcttc cgcctccgcc tccgccacat gccgtcagcg ccatggccag
       61 cgcggtaccc agggcagacc tcaccatcgt cgtgcgttcc atcgattcct tcccatgaac
      121 gttggccggc cgtgatcctg gctggcatgc ggccgcgccc agcgacggcc ctccgcgacc
      181 ctctatactt gggccgaccc ccacgcagtc tgccgggaaa ccggggcgct tccaacggcc
      241 tccggtctcc tttccgaaca ttgcttacgc atcaacgaga ttgccatgtc caacatcgtc
      301 atcgccgccg ccaagcgcac cgccatcggc tccttcctcg gccagttcaa cggcgtgccg
      361 acccccaccc tgggcgcggc cgtcatccgc gccgccctgg aacagtcggg tgttccggcc
      421 agcgacgtct ccgaggtcct catgggttgc gtgctgccgg ccaacctcgg ccaggcgccc
      481 gcccgccagg cggcgatcgc cgccggcatc ccgctgtcgg tgggcgccac caccctcaac
      541 aaggtgtgcg gctcgggcat gaagaccatc atgcttggcc atgacctgat caaggccggc
      601 tcggccagca tcgtggtggc cggcggcatg gaatcgatgt ccaacgcgcc gcacatgctg
      661 ccgaactcgc gcaccggcaa ccgcttcggc aacttccagg cggtcgacca catggcccac
      721 gacggcctgg tcaatgccta cgatggcaag gcgatgggcg aattcgccga atgcgccgtg
      781 gacaagtacc agttcagccg cgaagagcag gacgcctacg ccatcgaatc ggtcaagcgt
      841 gcgcaggccg cgcaggccaa tggcgcattc gccgatgaga tcgttgcggt gaaggtcgct
      901 acccgcaagg gagagatcga ggtcgccacc gacgagcagc cggggcgctc ggacatcgcc
      961 aagatcccga ccctgcgtcc ggccttcaag aaggacggca gcgtcaccgc cgccagctcc
     1021 tccagcattt ccgatggcgc ggccgccgtg gtcctgctga ccgaggaaga tgccgccgcg
     1081 cgtggcatca ccccgctggc ccgcattgtc ggccacgcca cccactcgca ggagccggag
     1141 tggttcacca ccgcaccgat cggcgcgctg cacacgctgc tggacaagac cggctggtcg
     1201 ctggaccagg tcgatctgtt cgaaatcaac gaagcctttg ccgtggtggc gatggcgccg
     1261 atgcgtgagc tgggcatccc gcacgacaag ctcaacgtga atggcggtgc ctgcgcgctg
     1321 ggccatccca tcggtgcctc gggtgcacgc ctggtggtca ccctggtcaa cgcgctgcgc
     1381 acgcgcggtg gcaagcgcgg cattgccacc ctctgcatcg gtggcggcga agcaaccgca
     1441 atcgccatcg aattgatttg aaaagattta acgatgattt cgcaaaaatg aatgcgggat
     1501 cgcttgacac ccaatattgg cttgtcatca tgttgtcggc gcgcagcatg cgcgttgcct
     1561 aattctaacg acgaggattt acacaatgag catcaacaag ctgctggtcg cgatgtccct
     1621 ggctctggcc ctggccgcct gctcgaagca ggaagctgcc caggacgccg ctgcttcggc
     1681 caacgaagcc gccaccgaag cccaggctgc tgccgaccag gccgccgctg ctggcgccca
     1741 gaccgccgac gctgcccagc aggccgctga caccgccgcc accgctgctg acgcttcggt
     1801 tgacgccgct gcccaggctg gcgctgctgc caccgacgct gctgccggcg ctgctgccga
     1861 cgctgccaag gctgccgaag gcaccgccga gaaggccaag gacgctgctg aagaagccaa
     1921 gaagtaataa cttctttctt cacgctgttc tggaaaagcc gctggttcgc cagcggcttt
     1981 ttctttgcgc cgatgccggc gtttgagcca ctgcatcgcc accccgtctt cacaacggca
     2041 tgaataggct ggcgtcccca tccattgcag caccggagac cgccatgaag attcgtccga
     2101 tcaccaccac cctgctggct gcctccctgc tgctggcgct ggccgcctgc aagggcccgg
     2161 aagccgaaca ggccaagcag gacgcacagc aggccgccga cagcgctggc gctgccgccc
     2221 gcgacgctgt cgacaaggcc gctgccgcca cccgcgaagc cgccgacaag accgccgccg
     2281 cctcggaaca ggcggctgcc gatacccagc aggccctgga caaggccgca gacgccaccg
     2341 ccaatgccgc cgacaaggcc aaggacgctg ccaccgacgc cgcggctcat gccagcgacg
     2401 cgaccgccaa cgccgcacag aaggtcgccg acaaggcccg cgatgtcgcc aatgacgcga
     2461 aggccaacgc cgccaaggaa gaagccaagc actgaggcat accggcagcc gggcatgcgc
     2521 tcggcgccac aggaa
//
LOCUS       DAOKIP010000341         2499 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.348,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000341 DAOKIP010000000
VERSION     DAOKIP010000341.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 2499)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2499)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2499
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.348"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            110..973
                     /locus_tag="QEL58_003923"
     CDS             110..973
                     /locus_tag="QEL58_003923"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010482813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pirin family protein"
                     /protein_id="HDS1678349.1"
                     /translation="MTTIIAPRVHDIGGLEVRRAVPTLQARSIGSFVFVDQMGPALMH
                     PGTAIDVRPHPHIGLATVTYLWSGAIGHRDTLGSDQVIRPGDVNWMTAGRGIAHSERT
                     PQPDRDHDNPIHGMQTWVALPKSHEEIEPAFYHHAAATLPEQRRKGAWLRVIAGRAYG
                     EESPVKVFADTLNVAIDLDPDAEIDIDNGHRERALYILEGDAQLDGVDVPAQHLIIPE
                     AGAVGRLRAKTPVKAMLFGGEPLDGPRHLWWNFVSSSKERIEQAKHDWEAGRFGTIPG
                     DDKEFIPLPQY"
     gene            1094..1813
                     /gene="aqpZ"
                     /locus_tag="QEL58_003924"
     CDS             1094..1813
                     /gene="aqpZ"
                     /locus_tag="QEL58_003924"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aquaporin Z"
                     /protein_id="HDS1678350.1"
                     /translation="MSMGKRLSAEFLGTFWLVLGGCGSAVLAAKFGGDGNPLGIGFLG
                     VALAFGLTVVTGAYAFGHISGAHFNPAVSVGLWAGGRFPTRDLVPYIIAQVAGGLLAG
                     FILLQIASGASGFAIDGSQAGAFASNGYGALSPGGYSVAAAFLCEVVLTAVFLIVIMG
                     STHGKAPAGFAPLAIGLSLTLIHLISIPVTNTSVNPARSTAVAFFAGSGAVSQLWLFW
                     VAPLLGGAIGGIIYKWIGNDR"
     gene            2010..2468
                     /locus_tag="QEL58_003925"
     CDS             2010..2468
                     /locus_tag="QEL58_003925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1678351.1"
                     /translation="MKFAPVVLSSLLFAVAQAAAQAPTECPSLPASSGLQWQQQAQAD
                     FLVCRASTRDGREVLSLMLSARDPSIPLNRTLRQEKGSFGGESLYWYQPDLGGQQPPG
                     YAERRISVVKLDKGRYAQISLYPDSPQELGSLQQLAQGMSLTPSAVAAGR"
BASE COUNT          402 a          858 c          802 g          437 t
ORIGIN      
        1 cgaggggctg cgccgttggc tggaacaacc tgttacccat acggggcatg cccccgtcac
       61 agctgcatgc gatgctgacc acctgatccc tgccagcgag aacgcccgca tgaccaccat
      121 catcgccccg cgcgtgcacg acatcggcgg actcgaagtc cgtcgcgccg tcccgaccct
      181 gcaggcacgc agcatcggtt cgttcgtgtt cgtcgaccag atgggcccgg cgctcatgca
      241 tcccggtacg gccatcgacg tgcgcccgca tccgcatatc ggcctggcca ccgtcaccta
      301 cctgtggtcg ggcgccatcg gccaccgcga cacgctgggc tcggaccagg tgatccgtcc
      361 cggtgacgtc aactggatga ctgccggccg cggcatcgcc cattccgaac gcacgccgca
      421 gcccgaccgt gatcacgaca acccgatcca cggcatgcag acctgggtcg cgttgccgaa
      481 gtcgcatgaa gagattgagc cggcgttcta ccaccatgcc gctgccaccc tgcccgagca
      541 gcgccgcaag ggtgcctggc tgcgggtcat cgccggccgc gcctacggcg aggagtcgcc
      601 ggtgaaggtg ttcgccgaca cgctcaacgt ggcgatcgac ctcgacccgg atgcggagat
      661 cgatatcgac aatggccacc gcgagcgcgc gctgtacatc ctcgaaggcg acgcgcagct
      721 ggatggcgtg gacgtgcccg cccagcacct gatcattccc gaggcaggcg ccgtcggccg
      781 cctgcgcgcg aagaccccgg tgaaggcgat gctgttcggc ggcgaaccgc tggatggccc
      841 gcgccacctg tggtggaact tcgtgtccag ttcgaaggag cgcatcgagc aggccaagca
      901 cgactgggaa gccggccgct tcggcaccat ccccggcgac gacaaggagt tcatcccgct
      961 gccgcagtac tgaacatcgc gtgttgcaca catccgaagg tgtatccctg cacccggcgt
     1021 tgacgctaca gtcacccgct gatcactgaa atgtgacata aatcacactt tcaccgtcaa
     1081 aggagtgcaa cacatgagca tgggtaaacg cttgtccgcc gagttcctcg gcacgttctg
     1141 gctggttctg ggtggctgcg gcagcgcggt gctggccgcc aagttcggcg gtgacggcaa
     1201 tccgctgggt atcggattcc tcggcgtggc gctggccttc ggcctgaccg tggtgactgg
     1261 cgcctatgcg ttcggccaca tctccggcgc gcatttcaat ccggcggtca gcgtcggtct
     1321 gtgggccggt ggccgcttcc cgaccaggga cctggtgccc tacatcatcg cccaggtcgc
     1381 cggcggcctg ctggcgggct tcatcctgct gcagatcgcc tccggtgcca gtggcttcgc
     1441 cattgatggc agccaggccg gtgcatttgc cagcaacggc tacggcgcgc tgtcgccggg
     1501 gggctacagc gtggcagccg ctttcctgtg cgaagtggtc ctcactgcgg tgttcctgat
     1561 cgtgatcatg ggctccaccc atggcaaggc accggccggc ttcgcgccgc tggcgatcgg
     1621 cctgtcgctg accctgatcc acctgatcag catcccggtc accaacacct cggtgaaccc
     1681 ggcccgctcc actgccgtgg ccttcttcgc cggcagcggt gcggtcagcc agctgtggct
     1741 gttctgggtc gccccgctgc tgggcggtgc gatcggcggc atcatctaca agtggatcgg
     1801 caacgaccgc tgaggcccgt gcggaccatt gcggccgacc ttcggccgca atggttacgc
     1861 ttgtaaccgc aatttgtgcg atcgctcacg ttccgttaag gttgagttga ccgcccgtgc
     1921 acatgccggg cggggtggca tccggggatg ggatgccaac gcccccatcc atcgggcggc
     1981 gccaaacgac acaccacctt gggggatgca tgaagttcgc gcctgtagtg ttgtcgagcc
     2041 tgctgttcgc cgtggcccag gccgccgcgc aggctcctac cgaatgtcct tcgctgcccg
     2101 ccagcagcgg cctgcaatgg cagcagcagg cgcaggccga tttcctggtc tgccgcgcca
     2161 gcacccgcga cggccgcgaa gtgctgagcc tgatgctcag tgcacgtgat ccgtccattc
     2221 cactgaatcg tacgctgcgc caggaaaagg gcagcttcgg cggcgaatca ctctattggt
     2281 accagcctga cctcggcggc cagcagccgc ccggctatgc cgagcggcgg atcagcgtgg
     2341 tcaagctcga caaagggcgt tacgcgcaga tttcgctgta tccggacagc ccgcaggaac
     2401 tgggctcgct gcagcagctg gcgcagggca tgagtctgac gccgtcggcc gtggccgccg
     2461 ggcgctgacc atgatgggga tgactgcctg gcagcatcc
//
LOCUS       DAOKIP010000342         2495 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.349,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000342 DAOKIP010000000
VERSION     DAOKIP010000342.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 2495)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2495)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2495
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.349"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(23..460)
                     /locus_tag="QEL58_003926"
     CDS             complement(23..460)
                     /locus_tag="QEL58_003926"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008268753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1678352.1"
                     /translation="MKFSLLLALGLLATALTAPAAQAAGNIDCDLRYNLSGWSLFYKT
                     ASGTGTIQCTNGARIPVRIKVTGGGLTVGKSKIVDGKGRFTGAYSLDDLLGKYVALGA
                     HAGAIRSGGAVAMTKGDVSLVLAGSGRGWDLGVDGSSFVIRRR"
     gene            complement(487..1293)
                     /locus_tag="QEL58_003927"
     CDS             complement(487..1293)
                     /locus_tag="QEL58_003927"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HDS1678353.1"
                     /translation="MQDLRISLVQGDTRWHDPAANRAYYGALLAPLAGTTDLVILPET
                     FTSGFSNEAIAQAEGMDGPTVAWVREQAKALNAAVIGSVQLREGEGVYNRLLFATPDG
                     ALQYYDKRHLFRYGGEHERYAAGRERLSVEWKGWRINPQVCYDLRFPVFCRNRYNVER
                     PGQLDFDLQIFVANWPSARAYAWKTLLRARAIENLCFVAAVNRIGVDGNQLHYAGDSA
                     VIDFLGQPQVEIREREQVVTSTISAEALAAHRARFPAMLDADAFHLDERA"
     gene            complement(1308..2456)
                     /locus_tag="QEL58_003928"
     CDS             complement(1308..2456)
                     /locus_tag="QEL58_003928"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HDS1678354.1"
                     /translation="MQPNTKLPKVGTTIFTVMSQLAAEHGAVNLGQGFPDFSAPQRLI
                     DETARAMAAGLNQYPPMTGVAPLRQAIAQKALDCYGAQVDADSEITVTSGGTEAIFNA
                     IHAVVRAGEEVIVLDPAYDCYEPAIDLAGAKAVHVSLDPQTFAVDWDRVRAAITPRTR
                     MLIVNTPHNPSGAMLSAQDMQALAELLRGTQIYLISDEVYEHIIYDGRRHESALRYPE
                     LRERAFVISSFGKTYHCTGWKIGYAIAPPALTAEFRKVHQYNTFTSFGPAQYGFAAMI
                     RDEPEHHLELGAFYQAKRDRFREQLAGTRLKALPVPGGYFQLVDYSAISDLLDHEFVK
                     WLTIEKGVTAIPLSPFYENPPAGQRLVRLCFAKNEATMDAAIERLRLL"
BASE COUNT          401 a          817 c          865 g          412 t
ORIGIN      
        1 cctccgtccc cttttcgcgg gttcagcggc gccggatcac gaacgaggag ccgtccacac
       61 ccaggtccca gccacggccg ctaccggcca gcaccagcga cacgtcgccc ttggtcatcg
      121 ccacggcacc accggagcgg atcgcgccgg cgtgcgcccc cagcgccacg tacttgccga
      181 gcaggtcgtc cagcgaatag gcgccggtga agcggccctt gccgtcgacg atcttcgatt
      241 tgccaacagt caggccaccg ccggtgacct tgatgcgcac cggaatgcgc gcgccgttgg
      301 tgcactggat ggtgccggta cccgaagcgg tcttgtagaa cagcgaccag ccggacaggt
      361 tgtagcgcag gtcgcagtcg atgttgccgg ccgcctgcgc cgcaggagcg gtcagcgcgg
      421 tggcgagcag gcccagggcc agcagcaggg agaatttcat ggtgtcatcc ggtgggaagg
      481 cagcgctcag gcgcgctcgt ccaggtggaa ggcatcggca tcgagcatcg cagggaagcg
      541 tgcgcggtgc gcggccagcg cctcggcaga gatcgtgctg gtcaccacct gctcgcgctc
      601 gcggatctcc acctgcggct ggccaaggaa atcaatcacg gcactgtcgc cagcgtaatg
      661 cagctggttg ccgtccacgc cgatgcggtt gaccgccgcc acgaagcaca ggttctcgat
      721 ggcccgcgca cgcagcagcg tcttccacgc gtaggcacgc gccgacggcc agttggcgac
      781 gaagatctgc aggtcgaagt ccagctgccc ggggcgctcg acgttgtagc ggttgcggca
      841 gaacaccggg aagcgcaggt cgtagcagac ctgcggattg atccgccagc ccttccactc
      901 cacgctcagg cgctcgcggc cggcggcata gcgctcgtgt tcgccgccat agcggaacag
      961 gtgacgcttg tcgtagtact gcagtgcacc gtccggcgtg gcgaacagca ggcggttgta
     1021 gacgccctcg ccctcacgca gctgcacgct gccgatcact gccgcgttca acgccttggc
     1081 ctgctcacgc acccaggcca cggtcgggcc gtccatgcct tcggcctggg cgatggcttc
     1141 gttggagaag ccactggtga aggtctccgg caggatcacc aggtcggtgg tgccggccag
     1201 cggcgccagc aacgcaccgt aataggcacg gttggcggcc gggtcgtgcc agcgggtgtc
     1261 gccctggacg agggaaatgc gcaggtcctg catgttcagc tctccactca cagcaggcgc
     1321 aggcgttcga tcgccgcgtc catcgtcgct tcgttcttgg cgaagcacag ccgcaccagg
     1381 cgctggccgg ccggcgggtt ctcgtagaac ggcgacagcg gaatggcggt gacgcccttc
     1441 tcgatggtca gccacttcac gaactcatgg tccagcagat cgctgatggc cgagtaatcg
     1501 accagctgga aatagccgcc cggcaccggc agcgccttca gccgggtgcc ggccagctgc
     1561 tcgcggaagc gatcgcgctt ggcctggtag aacgcgccca gctccaggtg atgctcgggc
     1621 tcgtcacgga tcatcgcggc gaaaccgtac tgtgccgggc cgaagctggt gaaggtgttg
     1681 tactggtgga ccttgcggaa ctcggcggtc agcgccggcg gcgcgatcgc ataaccgatc
     1741 ttccagccgg tgcagtggta ggtcttgccg aagctggaga tcacgaacgc acgctcgcgc
     1801 agttccgggt agcgcagcgc cgactcgtgg cggcggccgt catagatgat gtgctcgtac
     1861 acctcatcgg agatcaggta gatctgcgtg ccgcgcagca gctcggccag cgcctgcatg
     1921 tcctgcgccg acagcatcgc gccggacggg ttgtgcgggg tgttgacgat cagcatgcgg
     1981 gtgcgcgggg tgatcgccgc acgcacgcga tcccagtcga cggcgaaggt ctgcgggtcc
     2041 agcgacacat gcacggcctt ggcgccggcc aggtcgatcg ccggctcgta gcagtcgtag
     2101 gccgggtcga gcacgatcac ttcctcgccg gcacgcacca cggcgtggat ggcgttgaag
     2161 atggcctcgg tgccgccgct ggtgacggtg atctcgctgt cggcatccac ctgtgcgccg
     2221 tagcagtcca gcgccttctg cgcgatggcc tggcgcagcg gcgccacgcc ggtcatcggc
     2281 gggtactggt tcagcccggc ggccattgcc ctggcggttt catcgatcag gcgctgcggc
     2341 gcggaaaagt ccgggaagcc ctggccgagg ttgaccgcgc cgtgttcggc ggcgagctgg
     2401 gacatcacgg tgaagatcgt ggtaccgacc ttgggcagct tggtgttcgg ttgcatcggc
     2461 ctgggctgtg ggggaacaga cctgcgagtt tacgc
//
LOCUS       DAOKIP010000343         2477 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.350,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000343 DAOKIP010000000
VERSION     DAOKIP010000343.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 2477)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2477)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2477
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.350"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            <1..2401
                     /locus_tag="QEL58_003929"
     CDS             <1..2401
                     /locus_tag="QEL58_003929"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017158509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDS1678355.1"
                     /translation="AITLALSPAAVPALAQDATNLDTVIVTGTRAADRTVLESTSPVD
                     VLTAEDIRKAGVVNGELGSALQALLPSFNFPRQSNSGGADHVRAAQLRGLSPDQVLVL
                     VNGKRRHHTALVNTDSKIGKGTTPVDFNSIPVSAIKRIEVLRDGAGALYGSDAVAGVI
                     NVILDNGGDGGEIEASYGANHTDLKPIGRTLTDGQTGNISAKVGTALGEDGGFLRVGL
                     EYKHRNGTNRAGFDQIPPWDQTPDNLALQGKRNYVLGDGKSKDINLWLNTEIPVGQTS
                     TFYAFGIFNQRDTEGANYFRYPDGDANWKQIYPNGYRPISEGENRDVQAVAGVRGQWG
                     EWSYDGSVDYGQNDFTYRLRDSLNASLGPTSPTRFKTADYEYAQTVGNLDLSRVFTQS
                     DSISHTLGLGVEARHERYQTRPGDPASYAAGPYTDRPTGSQAGGGLTPQDAATLSRDV
                     ASAYASLSSQFGEKFSTDLAARYEHNDDFGGELTGKLGLRYEFTPAFALRGAISNNFR
                     APSLAQIGYESTSTGYNAGGQLVQGRLLSVNNPIARGLGAQNLKPEKSINTSLGFTSR
                     IGEHFDLSLDFFQIDIDDRIALSESITGDALTDYVAANYGVSGLQSASFFVNAADTRT
                     RGAELVSNWRQSLGNGQLLLTGTYAYTKTTLKNVLATPAQLRALNPDYVLFGIEETNT
                     LTDATPRTRGSFSAAWSNDHWSLSTRVNRYGSATRVFNFGDGYIPRQTYQAEWQLDAE
                     VEYRITPRWSVAIGGQNLTDNYPDRSNSDIHYFGNLPYDVLSPIGSNGAYYYGRVRYT
                     F"
BASE COUNT          466 a          895 c          745 g          371 t
ORIGIN      
        1 cgccatcacc ctcgcgctct cccccgccgc cgtccccgcc ctggcccagg acgcgaccaa
       61 cctcgatacg gtgatcgtca ccggcacccg tgccgccgac cgcaccgtgc tcgaatccac
      121 ctcgccggtg gatgtgctca ccgccgagga catccgcaag gccggcgtgg tcaacggtga
      181 actgggcagc gcgctgcagg cgctgctgcc gtcgttcaac ttcccgcgcc agtccaactc
      241 cggcggcgcc gatcacgtgc gcgccgcgca gctgcgcggc ctgtcgccgg accaggtgct
      301 ggtactggtc aacggcaagc gccgccacca caccgcgctg gtcaacaccg acagcaagat
      361 cggcaaaggc accaccccgg tcgacttcaa ctcgattccg gtcagcgcga tcaagcgcat
      421 cgaagtgctg cgcgatggcg ccggtgcgct gtacggctcg gatgccgtgg ccggcgtgat
      481 caacgtgatc ctcgacaacg gtggcgacgg tggcgagatc gaagccagtt acggcgccaa
      541 ccacaccgac ctcaagccga tcggccgcac cctcaccgac ggccagaccg gcaacatcag
      601 cgccaaggtc ggcaccgcgc tgggcgagga cggtggtttc ctgcgcgtcg gcctcgagta
      661 caagcaccgc aacggcacca accgcgccgg cttcgaccag attccaccgt gggaccagac
      721 cccggacaac ctggcgttgc agggcaagcg caattacgtg ctgggcgatg gcaagagcaa
      781 ggacatcaac ctgtggctga acaccgagat cccggtcggc cagacctcga ccttctacgc
      841 cttcggcatc ttcaaccagc gtgataccga aggcgcgaac tacttccgct atcccgacgg
      901 cgatgccaac tggaagcaga tctatccgaa cggctaccgg ccgatctccg aaggcgagaa
      961 ccgtgacgtg caggcggtgg ccggcgtgcg cggccagtgg ggcgaatgga gctacgacgg
     1021 cagcgtggat tacggtcaga acgacttcac ctaccgcctg cgtgattcgc tcaacgcgtc
     1081 gctgggcccg accagcccga cccgcttcaa gaccgccgat tacgagtatg cgcagaccgt
     1141 gggcaacctc gacctgagcc gtgtgttcac ccagagcgac agcatcagcc acacgctggg
     1201 cctgggcgtg gaagcacgcc acgagcgcta ccagacccgc cccggcgacc cggccagcta
     1261 cgccgccggc ccgtacaccg accgcccgac cggttcgcag gccggtggcg gtctgacccc
     1321 gcaggacgcg gctaccctgt cgcgcgatgt cgccagcgcc tatgccagcc tgtccagcca
     1381 gttcggcgag aagttctcca ccgacctggc cgcgcgctac gagcacaacg atgacttcgg
     1441 tggcgaactg accggcaagc tcggcctgcg ctacgaattc accccggcct tcgcgctgcg
     1501 cggcgcgatc tccaacaact tccgtgcacc gtcactggcg cagatcggtt acgaatccac
     1561 ctccaccggc tacaacgccg gcggccagct ggtgcagggg cgcctgctgt cggtcaacaa
     1621 tccgatcgcg cgcggcctgg gtgcgcagaa cctgaagccg gaaaagtcga tcaacacctc
     1681 gctgggcttc accagccgca tcggcgagca cttcgacctg tcgctggact tcttccagat
     1741 cgacattgat gaccgcatcg cactgtcgga aagcatcacc ggcgatgcgc tgaccgacta
     1801 cgtggcggcc aactacggcg tcagcggtct gcagagcgcc agcttcttcg tcaacgccgc
     1861 cgacacccgc acccgcggcg ccgaactggt gagcaactgg cgccaatcgc tgggcaacgg
     1921 ccagctgctg ttgaccggca cctatgcgta caccaagacc acgctgaaga acgtgctggc
     1981 cacgccggca cagctgcgcg cactgaaccc ggactacgtg ctgttcggca ttgaagagac
     2041 caacaccctc accgacgcca ccccgcgtac gcgcggcagt ttctcggccg catggagcaa
     2101 tgatcactgg tcgctgagca cccgcgtgaa ccgctacggc agcgccaccc gcgtgttcaa
     2161 cttcggtgat ggctacatcc cgcgccagac ctaccaggcc gaatggcagc tggatgcgga
     2221 agtggagtac cgcatcaccc cgcgctggag cgtggccatc ggcggccaga acctgaccga
     2281 caactacccg gatcgatcca acagcgatat ccactacttc ggcaacctgc cgtatgacgt
     2341 gttgtcgccg atcggcagca acggcgcgta ctactacggc cgggtccgct atacgttctg
     2401 actgccctgg gtgtcattgc cttgggtggg tgcggaccgt tggtccgcac tgcctgggtt
     2461 ccatgcaggc cgacctg
//
LOCUS       DAOKIP010000344         2403 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.351,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000344 DAOKIP010000000
VERSION     DAOKIP010000344.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 2403)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2403)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2403
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.351"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..873)
                     /locus_tag="QEL58_003930"
     CDS             complement(<1..873)
                     /locus_tag="QEL58_003930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005992724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1678356.1"
                     /translation="MSKPDPAMNALGVLALELAGGEIPRQAVLSAEQAGELAERVGRD
                     LSKLVPQVAELDLVFAAAHFDPAEVLRPGWPIHRRLEELQMRAPGRNQGPRLLAFGTD
                     ANGDVPLPFQADASLVGGGLRVVPFLLTGSDVATTNAVANALEETLLANGMAHADTAL
                     MAQNTFGARIEHARYFTVNDLAAMMSMQYDNQGLAALWPLIETAIMAPGEDEWLNAAP
                     EPLLRYTHGEARMALFDPAGWCAHYNHGNSDCDRLKGIYEQFLMRQRQMAAVLEAHGV
                     PVLFVHCEAGQDARE"
     gene            967..2262
                     /locus_tag="QEL58_003931"
     CDS             967..2262
                     /locus_tag="QEL58_003931"
                     /EC_number="2.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011260437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acetyltransferase"
                     /protein_id="HDS1678357.1"
                     /translation="MPGISMPNARPVAILGGVRIPFCRQNTAYSDVGNLGMSVRTLGA
                     LVERFGLHGQQLGEVAMGAVIKHSSDWNLGREATLSSGLSPLTPGITLQRACGTSLDS
                     IITVANKIALGQIESGIGGGSDTTSDVPIVYGKKLRARLLAANRAMSTGDKIRALTSG
                     FKFSELKPEFPGVAEPRTGKSMGDHCEDMAKEWNISRDSQDEWAVSSHKKLAAAYERG
                     FFNDLIAPFRGVERDNILRPDTSLEKLATLKPAFDKVSGRGTLTAANSTPLTDGAAAV
                     LLASEEWARAHGHEPQAYLRDAHVAAVDFVHGEGLLMAPTIAVPEMLKRNGLTLQDFD
                     IYEIHEAFAAQVLCTLRAWESEDYCRNRLGLDAPLGRIDPDKINLLGSSLATGHPFAA
                     TGARVIATAAKQLAERGGGRALVSICTAGGMGVVAIVER"
BASE COUNT          381 a          832 c          796 g          394 t
ORIGIN      
        1 ctcgcgcgcg tcctgcccgg cctcgcagtg cacgaacagc accggcacgc cgtgcgcctc
       61 cagcaccgcg gccatctgcc gctggcgcat caggaactgc tcgtagatgc ccttcaggcg
      121 gtcacagtcg ctgttgccgt ggttgtagtg cgcgcaccag ccggccggat cgaacagcgc
      181 catgcgcgcc tcgccatggg tgtagcgcag cagcggctcg ggcgcggcat tgagccattc
      241 gtcctcgccc ggcgccatga tcgcggtctc gatcagcggc cacagcgcgg ccaggccctg
      301 gttgtcgtac tgcatcgaca tcatcgcagc caggtcgttc acggtgaaat agcgcgcatg
      361 ctcgatgcgg gcgccgaagg tgttctgcgc catcaatgcg gtatcggcgt gcgccatgcc
      421 gttggccagc agggtttctt ccagcgcatt ggcgaccgcg ttggtggtgg ccacatcgct
      481 gccggtcagc aggaacggca ccacgcgcag tccaccgccc accaggctgg catcggcctg
      541 gaacggcagc ggcacgtcgc cgttggcatc ggtgccgaac gccagcaggc gcgggccctg
      601 gttgcggccc ggcgcacgca tctgcagttc ttccaggcgg cggtggatcg gccagcccgg
      661 gcgcagtact tctgccgggt cgaaatgcgc ggcggcgaac accaggtcca gctcggccac
      721 ctgcggcacc agcttggaca ggtcgcggcc gacgcgttcg gccagttcac cggcctgttc
      781 ggcgctgagt accgcctggc gggggatttc gccgccggcc agttccaggg ccagcacgcc
      841 aagggcattc atcgcggggt cgggtttgct catggttcca cggttggccc atcacagggc
      901 ggcagctaca cttggctcca ttatgcctgc tccgtcgtgc aggccatgtt gcagacaccc
      961 tcatccatgc caggtatctc catgcccaac gctcgtcccg tcgccatcct cggtggcgtc
     1021 cgcattccgt tctgccgcca gaacaccgcg tattcggatg tcggcaacct cggcatgtcg
     1081 gtccgtacgc tgggcgcgct ggtcgaacgt ttcggcctgc acggccagca gctcggtgaa
     1141 gtggcgatgg gtgcggtgat caagcactcc agcgactgga acctgggccg tgaagccacg
     1201 ctgtcctccg gcctgtcgcc gctgaccccg ggcatcaccc tgcagcgcgc ctgcggcacc
     1261 tcgctggaca gcatcatcac cgtggccaac aagatcgcgc tgggccagat cgaatcgggc
     1321 atcggcggtg gttcggacac cacctccgac gtgccgatcg tctacggcaa gaagctgcgc
     1381 gcgcgcctgc tggccgccaa ccgtgccatg agcaccggcg acaagatccg cgcgctcacc
     1441 tccggcttca agttctccga actgaagccc gagttcccgg gcgtggccga gccgcgcacc
     1501 ggcaagagca tgggcgacca ttgcgaggac atggccaagg aatggaacat ctcgcgcgac
     1561 tcgcaggacg agtgggcggt gtcctcgcac aagaagctgg ccgcggccta tgagcgcggc
     1621 ttcttcaacg atctgatcgc tccgttccgt ggtgtcgagc gtgacaacat cctgcgcccg
     1681 gatacctcgc tggaaaagct ggccacgctg aagccggcgt tcgacaaggt gtccggccgc
     1741 ggcacgctga ccgccgccaa ctccacgccg ctgaccgacg gtgccgctgc ggtgctgctg
     1801 gccagcgaag agtgggcgcg cgcgcacggc cacgagccgc aggcctacct gcgcgatgcg
     1861 cacgtggcgg cggtggactt cgtgcatggc gagggcctgc tgatggcacc gaccatcgcc
     1921 gtgccggaga tgctcaagcg caatggcctg accctgcagg acttcgacat ctacgagatc
     1981 cacgaagcct tcgccgcgca ggtgctgtgc acgctgcgtg cgtgggagag cgaggactat
     2041 tgccgcaacc gcctgggcct ggatgcaccg ctgggccgca tcgacccgga caagatcaac
     2101 ctgctgggct cgtcgctggc caccggccac ccgttcgccg ctaccggcgc acgcgtgatc
     2161 gccaccgccg ccaagcagct ggccgaacgc ggcggcggcc gcgcgctggt ctcgatctgc
     2221 accgccggcg gcatgggcgt ggtggcgatc gtcgaacgct gatcgctgca acagcacgcc
     2281 aaccgaggtt ggcgactacc gggaatgcgc gctggatctg ctttggtgga tgccgacctt
     2341 ggtcggccat gcgatgtcat cgttcggaag atgtcagagc gccaaccaag gttggcgact
     2401 acc
//
LOCUS       DAOKIP010000345         2383 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.352,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000345 DAOKIP010000000
VERSION     DAOKIP010000345.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 2383)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2383)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2383
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.352"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..771)
                     /locus_tag="QEL58_003932"
     CDS             complement(<1..771)
                     /locus_tag="QEL58_003932"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014039007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TSUP family transporter"
                     /protein_id="HDS1678358.1"
                     /translation="MLELVPPELWWLVVIAFIAGLVDAAVGGGGLVQLPGLFTVLPQQ
                     TPAMLFGTNKFSSMFGTGAAAWRYARNVRFPWKPVLFAAGTAFIFSFAGATAVSLLPK
                     DAVRPLVLVLLIAMLAYTLWKKDFGALHRPQEIGRRELVIALAIGAAIGFYDGFFGPG
                     TGSFLIFLFVRFFGLDFLRASAASKVVNLATNVAAISFFVPTGNILWLFALPMAAANI
                     IGSVVGTRLALKGGTPFIRKLFVGLVVVLIARMAWDTFR"
     gene            874..1266
                     /locus_tag="QEL58_003933"
     CDS             874..1266
                     /locus_tag="QEL58_003933"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004141396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YchJ family protein"
                     /protein_id="HDS1678359.1"
                     /translation="MSRQPADPCPCGLAADYAACCGRFHAGEAAPDAERLMRSRYSAY
                     VRGLADYLRQTWHPDTRPAELVLEEAPGQRTHWLGLTVHEHTPTGADSAEVRFTARYR
                     IGGGSAVKMTEHSRFLRIDGRWYYLDAV"
     gene            complement(1270..>2383)
                     /locus_tag="QEL58_003934"
     CDS             complement(1270..>2383)
                     /locus_tag="QEL58_003934"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005414941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HDS1678360.1"
                     /translation="YHQVRALCLLLLVAVVFALLHQDVGGYLRSGHVTALTPLRFHAI
                     SAWLPLLLAGLALWPERGRRRQDLLLRGVACGLALAVFLLLAAQQPSGMHDLLSDRHW
                     RWIPAHWNALAQVPALLFLLATAALGWQAWRHPRPLHTAMLLALLCLWWMLPRIFLQP
                     VLLPALSSAALLLMLGAMLQESFHMAFRDELTGLPGRRAFNETVQRARGTYSIAMVDV
                     DHFKSFNDTHGHDTGDDVLRLVASRLSRVSDGGRAFRYGGEEFVVVFLDRPAAACVDA
                     VEALRQSIEATRMQLRDRSTRSRDDEAGRQQRGRGGNGQVVQVTVSIGLADSREDPRP
                     AAVIKAADQALYRAKDGGRNQVRAHAGQRVLAVRGG"
BASE COUNT          443 a          863 c          768 g          309 t
ORIGIN      
        1 gcggaacgta tcccacgcca tccgtgcgat cagcaccacc accaacccca cgaacagctt
       61 gcggatgaac ggcgtgccgc ccttcagcgc caatcgcgtg ccgaccaccg agccgatgat
      121 gttggccgcc gccatcggca gcgcgaacag ccacaggatg ttgccggtgg gcacgaagaa
      181 cgagattgcc gccacattgg tcgccaggtt caccaccttc gacgcggcgg atgcacgcag
      241 gaaatccagc ccgaagaagc gcacgaacag gaagatcagg aaactgccgg tgcccggccc
      301 gaagaatcca tcgtagaaac cgatcgccgc accgatcgcc agcgcgatca ccagctcgcg
      361 gcgtccgatc tcctgcggcc ggtgcagcgc gccgaagtcc ttcttccaca gtgtgtaggc
      421 cagcatcgcg atcagcagca ccagcaccag cgggcgcacc gcatccttgg gcagcaggct
      481 caccgccgtg gccccggcga acgagaagat gaaggcggta ccggccgcga acagcaccgg
      541 cttccacggg aagcgcacgt tgcgcgcata gcgccaggcc gccgcaccgg tgccgaacat
      601 cgaactgaat ttgttggtac cgaacagcat tgccggcgtc tgctgcggca gcaccgtgaa
      661 caggccgggc agctgcacca ggccaccgcc accgacggcg gcatccacca ggccggcgat
      721 gaaggcgatc accaccagcc accacaactc agggggaacc agttccagca cggcggtcat
      781 tcaaggtggg ggcgcgacag catacgcctg tcctgctgca actgacctgt gccgcgcgtg
      841 gatcaatccg tgcaacccgg cgacaatgac ggcatgagcc gacaacccgc cgatccctgt
      901 ccctgtggcc tggccgccga ctacgccgcc tgctgtggac gcttccatgc cggcgaagcc
      961 gcaccggacg ccgagcgcct gatgcgttcg cgctacagcg cgtacgtgcg tggccttgcc
     1021 gattacctgc gccagacctg gcacccggat acccgcccgg ccgagctggt gctggaggag
     1081 gcgccgggcc agcgcacgca ttggctgggc ctgaccgtgc acgagcacac gcccaccggt
     1141 gcggacagcg ccgaggtgcg cttcaccgcg cgctaccgca tcggcggcgg cagtgcggtg
     1201 aaaatgaccg agcacagccg cttcctgcgc atcgacggcc gctggtacta cctcgacgcg
     1261 gtctgagcct cagccgccgc gcacggccag cacgcgctgg ccggcgtgcg cgcggacctg
     1321 gttgcggccg ccgtccttgg ccctgtacag cgcctggtcg gccgccttga tcaccgctgc
     1381 cggccgtgga tcctcacggc tgtcggccag gccgatactc actgtcacct gcaccacctg
     1441 gccgttgccg ccgcgtccgc gctgctggcg gccggcttcg tcatcacggc tgcgggtgct
     1501 gcggtcgcgc agctgcatgc gggtggcctc gatgctctgc cgcaatgctt ccacggcatc
     1561 gacacaggcc gccgccggac ggtccaggaa caccacgacg aactcctcgc cgccatagcg
     1621 gaacgcgcgg ccaccgtcgc tgacccgcga cagccgcgag gccaccaggc gcagcacatc
     1681 gtcaccggta tcgtggccat gggtgtcgtt gaaggacttg aagtgatcca cgtccaccat
     1741 tgcgatgctg taggtgccgc gtgcccgctg cacggtctcg ttgaacgcgc ggcgccccgg
     1801 caggccggtc agttcatcgc ggaaggccat gtggaaggac tcctgcagca tcgcacccag
     1861 catcagcagc agggcagcac tgctcagtgc cggcaacagc accggttgca ggaagatccg
     1921 cggcagcatc caccacaggc acagtagggc cagcagcatc gcggtgtgca atggccgcgg
     1981 atgccgccac gcctgccagc ccaacgcagc ggtggccagc aggaacagca gggccggcac
     2041 ctgcgccagc gcgttccagt gggcgggaat ccagcgccag tgacggtccg acaacaggtc
     2101 gtgcatgccg ctgggctgct gtgctgccag cagcaggaag acggcaagcg ccaggccgca
     2161 ggccacgccg cgcagcagca ggtcctggcg acgtcgcccg cgttccggcc acaatgccag
     2221 gcccgccaac agcagcggca accaggccga gatggcatgg aagcgcagcg gggtcagggc
     2281 ggtcacatgg ccactgcgca ggtagccacc cacatcctgg tgcagcagcg cgaacaccac
     2341 cgccaccagc agcaacaggc acagcgcacg cacctggtgg tag
//
LOCUS       DAOKIP010000346         2359 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.353,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000346 DAOKIP010000000
VERSION     DAOKIP010000346.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 2359)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2359)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2359
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.353"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(75..1907)
                     /locus_tag="QEL58_003935"
     CDS             complement(75..1907)
                     /locus_tag="QEL58_003935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008268587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HDS1678361.1"
                     /translation="MAVEAATSELVKVVALLGAAVVMVPLFRRAGLGSVLGYFAAGLA
                     IGPFGLGWFSDPQAILHTAELGVVMFLFVIGLEMRPSHLWSLRKEIFGLGTLQIVTCA
                     LVLTSIAKLFGFPWQVAFIGATGFVLTSTAVVMQLLAERGDIALPSGQKIVSILLFED
                     LLIVPLLALVAWMAPSAGSADGEGSRWLSVAIGVGAIVGLVLVGRFLLNPLFRVLAES
                     KAREVMTAAALLVVLGAALLMQLSGLSMAMGAFLAGVLLSESTFRHQIEADIEPFRGI
                     LLGLFFLSVGMALDLSVVAAHWQLILGLVLALMAAKALCIYVVARIMGSDHAQALDRG
                     VLMAQGGEFAFVLFSAAASAGVIDLDINANFTAVVVLSMALTPLVVLVYKRVAPKPTV
                     NMDGVDEADGLSGSVLLIGFGRFGQVASQSLLARDVDVTIIDNDVEMIQSAARFGFKI
                     YYGDGTRLDVLHASGAATARAIAVCVDKAEAADRIVELVAHEFPQAKLMVRSFDREHS
                     LRLIHAGVDFQIRETFESAVLFGQAALVELGADEDDAIEIAEQIRRRDAERFELEIAG
                     GGLNAGARMIYGNSPQGVPTPTPFTAPKRASKTLNPQDVPEEEE"
BASE COUNT          469 a          848 c          711 g          331 t
ORIGIN      
        1 ctgccggcca gcggccggca ctaccgacgg atggtgcgca aaggttgccg gccagtggcc
       61 ggcacgaccg ggctctactc ttcctcttcc ggcacgtcct gcgggttcag cgtcttgctc
      121 gcgcgcttcg gtgcggtgaa cggggtcggc gtcggtacgc cctgcgggct gttgccgtag
      181 atcatccgcg cgccggcatt caaaccgcca ccggcaatct ccagctcgaa gcgctcggca
      241 tcgcggcggc ggatctgctc ggcaatctcg atcgcgtcat cctcatccgc acccagctcc
      301 accagcgcgg cctggccgaa cagcaccgcc gattcaaacg tctcgcggat ctggaaatcg
      361 acaccggcat ggatcagccg cagcgaatgt tcgcggtcga acgagcgcac catcagcttg
      421 gcctgcggga actcatgcgc caccagctcg acaatgcggt cggcggcctc ggccttgtcc
      481 acgcacactg caatcgcgcg cgcagtggcg gcacccgagg catgcagcac gtccagacgc
      541 gtgccatcac cgtagtagat cttgaaaccg aagcgcgccg cgctctggat catctccaca
      601 tcgttgtcga tgatggtcac gtccacgtcg cgcgccagca gcgactggct ggcgacctgg
      661 ccgaagcggc cgaagccgat cagcagcacg ctgccggaca ggccatcggc ctcgtccacg
      721 ccatccatgt tcaccgtcgg cttcggcgcc acgcgcttgt agaccagcac caccagcggg
      781 gtcagcgcca tcgacagcac caccacggcg gtgaagttgg cattgatgtc caggtcgatc
      841 acgccagccg atgcggcggc ggagaacagc acgaacgcga actcgccgcc ctgtgccatc
      901 agcacgccgc gatccagcgc ctgcgcatga tcgctgccca tgatgcgcgc caccacgtag
      961 atgcacagcg ccttggccgc catcaacgcc agcaccaggc cgaggatcag ctgccagtgc
     1021 gcggccacca cgctcaggtc cagcgccatg cccacgctga ggaaaaacag gcccagcagg
     1081 atgccgcgga acggttcgat atccgcttcg atctggtggc ggaaggtcga ctcgctcaac
     1141 agcacgccgg ccaggaacgc acccatcgcc atcgacaggc cggacaactg catcagcagc
     1201 gccgcaccca gcaccaccag cagcgcggcg gcggtcatca cctcgcgcgc cttcgattcg
     1261 gccagcacgc ggaacagcgg gttgagcagg aagcggccga ccagcaccag gccgacgatg
     1321 gcgccgacgc cgatcgccac cgacagccag cgcgaaccct cgccatcggc gctgcccgcg
     1381 ctcggcgcca tccacgccac cagcgccagc aacggcacga tcagcaggtc ttcgaacagc
     1441 aggatcgaaa cgatcttctg ccccgacggc agtgcgatgt caccgcgctc ggccagcagc
     1501 tgcatgacca ccgcggtgga ggtgagcacg aagccggtgg cgccgatgaa ggcgacctgc
     1561 caggggaagc cgaacagctt ggcgatgctg gtgagcacca gcgcacaggt gacgatctgc
     1621 agcgtgccca gcccgaagat ttccttgcgc aggctccaca ggtgcgaggg ccgcatttcc
     1681 aggccgatca cgaacaggaa catcaccacg ccgagctcgg ccgtatgcag gatcgcctgc
     1741 gggtcggaga accagcccag cccgaacggt ccgatcgcca ggccagcggc gaagtagccc
     1801 agtaccgagc ccaggccggc ccggcggaac aagggcacca tcaccaccgc cgcgcccaac
     1861 agggccacga ccttgaccag ctcgctggtc gctgcttcta ccgccatgcg gtgctttccc
     1921 cgaaaactga aatcggcctc aaagatagag caatgccgat gacggcaata gcacgcatgt
     1981 tgcgccggat tgtcttggag gtggaacgat gtggggagtg acccctcaga tcatcctgaa
     2041 accgcacacc cgcttcggca tgtgccaacc ttgcacccgc ttcggtaggt gccaaccttg
     2101 cacccgcttc ggtaggtgcc aaccttggtt ggcacgagag cgccgaccaa ggtcggcatc
     2161 caccaatgca ctccccaacc gggttcaccc accccggcaa aacgcggcgt aatcgatata
     2221 ccccgggaat ggcacccccg gcgcacacag cggacagtgc gggtccggcc ggatgccgga
     2281 tcccgaaacc atgcatccgc ttcggtaggt gccaatcttg gttggcacaa gagcgccgac
     2341 caaggtcggc atccaccaa
//
LOCUS       DAOKIP010000347         2268 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.354,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000347 DAOKIP010000000
VERSION     DAOKIP010000347.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 2268)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2268)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2268
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.354"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            89..667
                     /locus_tag="QEL58_003936"
     CDS             89..667
                     /locus_tag="QEL58_003936"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005416020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDS1678362.1"
                     /translation="MASHSQLFPGLPLHSARLVLSPIRRDDAAALFVLQSDPDVMRWW
                     NHPAWTRPAEAREQIDDDLAAHAIGTQLKLAVRESMDGPLLGVCVVFAVDRDAARAEI
                     GYLLAPDQQGQGYMHEALQQVLAYLFRTLRLHRVEAEIDPRNAPSAHVLERLGFHREG
                     VLRQRWRIQGKLADSAVYGLLADDDAAAALPA"
     gene            777..>2268
                     /locus_tag="QEL58_003937"
     CDS             777..>2268
                     /locus_tag="QEL58_003937"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004152835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S10 family peptidase"
                     /protein_id="HDS1678363.1"
                     /translation="MKSLLHIAALCVGLLIAPASVLAAPDAEAKPDPKDDKTEAPALP
                     ADASARQSMHLAGRTLDYTATVGTLPVRDAKGKVIADVVFTAYTMPGKDRPVTFALNG
                     GPGASSVYLNMGAIGPKVVTFGSEGDSASAPATLHDNPGTWLDFTDLVFIDPVGTGFS
                     RARIGDDEAKKALYNPSADIEYLSRSIYDWLLRNQRMASRKYLTGESYGGYRGPRITH
                     FLQTRLGVAMNGLVLVSPYLSPTLEDNADVSPMAWMQTLPSIAAAHLERQGRLTDAAM
                     REVVEYTRGDYATALMKGRSDPQATEAMLRRVTELTGLDPQFVRRAGGRLETQAYLRE
                     VFRDKGTLGSRYDSNVTAFDPFPNDPEQRANDPLLDSIIAPTTTAMVDFVTRVVGWKV
                     DARYQALNYDVNRLWDRNGELRQGAVTQLRQAVAIDPHLQVLIVHGWNDLSCPFMGSI
                     LTVDQMPAMGSNPDRVQVRSYPGGHMFYSRADSQAAFRRDVQALFQR"
BASE COUNT          373 a          789 c          755 g          351 t
ORIGIN      
        1 cactaccggt tggcggccgg actcatcccg cccccatcgg caaacccggc ggcgccataa
       61 tgcgcgtcca tccgcgtgga ccaccgtatt ggccagccac tcgcagctgt tccccggcct
      121 gccgctgcac agcgcgcggc tggtgctgag cccgatccgc cgcgacgacg ctgccgcgtt
      181 gttcgtactg cagtcggatc cggacgtgat gcgctggtgg aaccacccgg cctggacacg
      241 accggccgag gcgcgcgaac agatcgatga cgatcttgcc gcccatgcca tcggcaccca
      301 gctgaaactg gccgtgcgcg aatccatgga cggcccgctg cttggcgtct gcgtggtgtt
      361 cgccgtggac cgtgacgccg cgcgcgccga gatcggctac ctgctggcgc ccgaccagca
      421 gggccagggc tacatgcacg aggcgctgca gcaggtgctg gcctatctgt tccgcacgct
      481 gcgcctgcat cgggtcgaag ccgagataga cccgcgcaat gcgccttccg cacacgtgct
      541 ggaacggctg ggcttccacc gcgagggcgt gctgcggcag cgctggcgca tccagggcaa
      601 actggccgac tcggccgtct atggcctgct ggccgacgac gacgcggctg ccgccctgcc
      661 cgcttgacgc aatctggctg ctggaggctg cagcctgcgg acatgccttt ggacacatac
      721 ggcgcggccc tccccggcct agcatcggaa cccccttccg ctgccgaaac ggtgccatga
      781 agtccctgct gcatatcgcc gcgctctgcg tcggcctgct catcgccccg gccagcgtgc
      841 tggccgcgcc cgacgccgag gccaagcccg atccgaaaga cgacaagacc gaagcgcccg
      901 ccctgccggc cgatgcgtcg gcacgccaga gcatgcacct ggccggccgc accctggact
      961 acaccgccac cgtcggcacc ctgccggtgc gcgatgccaa gggcaaggtg atcgccgacg
     1021 tggtgttcac cgcctacacg atgccgggca aggaccggcc ggtgaccttc gcgctcaatg
     1081 gcgggcccgg cgcgtcgtcg gtctacctca acatgggcgc gatcgggccc aaggtggtga
     1141 ccttcggttc ggagggcgac agcgcctcgg cgccggctac cctgcatgac aatccgggta
     1201 cctggctgga cttcaccgac ctggtgttca tcgatccggt cggcaccggc ttcagccgtg
     1261 cacgcatcgg cgatgacgaa gccaagaaag cgctgtacaa ccccagcgcc gacatcgagt
     1321 acctgtcgcg ctcgatctac gactggctgc tgcgcaacca gcgcatggcc tcacgcaagt
     1381 acctgaccgg cgagagctat ggcggttatc gcggcccgcg catcacccac ttcctgcaga
     1441 cccggctggg cgtggcgatg aacggcctgg tgctggtctc gccctatctg agcccgaccc
     1501 tggaagacaa cgccgatgtc tcgccgatgg cctggatgca gacgctgccg tcaattgccg
     1561 ccgcgcacct ggagcgccag ggcaggctga ccgatgcagc gatgcgcgag gtggtcgaat
     1621 acacccgcgg cgactacgcg acggcgctga tgaagggccg cagcgatccg caggcgaccg
     1681 aagcgatgct gcgcagggtg accgagctga ccggactgga cccacagttc gtgcgccgcg
     1741 ccggtggccg cctggaaacg caggcgtacc tgcgtgaagt gttccgcgac aagggcacgc
     1801 tgggcagccg ctacgattcc aacgtgaccg cattcgatcc gttcccgaac gatccggagc
     1861 agcgcgccaa tgatccgctg ctggacagca tcatcgcgcc gaccaccacg gcgatggtcg
     1921 acttcgtgac ccgcgtggtc ggctggaagg tggatgcgcg ctaccaggct ctgaactacg
     1981 acgtgaaccg gctgtgggac cgcaatggtg agctgcgcca gggtgcggtg acccagttgc
     2041 ggcaggcggt ggcgatcgat ccgcatctgc aggtgctgat cgtgcatggc tggaacgacc
     2101 tgtcgtgtcc gttcatgggg tcgatcctga cggtggacca gatgccggcg atgggcagca
     2161 acccggatcg cgtgcaggtg cgcagctatc cgggcgggca catgttctac agccgggcgg
     2221 acagccaggc ggcgttccgc agggatgtgc aggcgctgtt ccagcgta
//
LOCUS       DAOKIP010000348         2259 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.355,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000348 DAOKIP010000000
VERSION     DAOKIP010000348.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 2259)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2259)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2259
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.355"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(44..871)
                     /locus_tag="QEL58_003938"
     CDS             complement(44..871)
                     /locus_tag="QEL58_003938"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008264867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3025 domain-containing protein"
                     /protein_id="HDS1678364.1"
                     /translation="MTAAAGDNGGPRRFVPPPRAAVDPQAFRHPLFGGLQDFRDLLGG
                     TAWPSIAALDARLALPGKRLLEQDAALLADGLHYEVRIAQGRIATRADNWHDLFNALV
                     WARFPQLKQALNAQQCRHIETMPPGQRNRAQAALTQFDETGVIVRVCDDALLAAWDGH
                     DWPAVFEPTRWHSGDIAIAAVFGHALMEQALLPGRLLVGKCVVVQGDDDDRCIAEVAA
                     AIGEGRAITDPAQLRPLPLAGIPGWHERQDAAFYADADYFRPLRAGRAYPPPLHAAQ"
     gene            complement(868..2229)
                     /gene="rimO"
                     /locus_tag="QEL58_003939"
     CDS             complement(868..2229)
                     /gene="rimO"
                     /locus_tag="QEL58_003939"
                     /EC_number="2.8.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011051794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12 methylthiotransferase
                     RimO"
                     /protein_id="HDS1678365.1"
                     /translation="MSQLNPKVGFVSLGCPKALVDSERILTQLRSEGYDIVPSYDSAD
                     VVVVNTCGFIDSAVTESLDAIGEAMNQNGKVIVTGCLGKRPEQIREAYPNVLAVSGPQ
                     DYQSVMEAVHEALPPKHDPFVDLVPDYGIKLTPRHYAYLKISEGCNHKCSFCIIPSMR
                     GKLVSRPVDEVLREAERLVRGGVRELLVVSQDTSAYGVDVKYAEKMWRDKAYQTRLKA
                     LCEGLSELDAWVRMHYVYPYPHVDEVVPLMAENRILPYLDIPFQHASPRILRLMKRPG
                     AVEKTLERVQNWRRIAPDITVRSTFIVGFPGETEAEFEELLSFLDEAQLDRVGAFAYS
                     PVEGATANDLPDAVPEEVKQERLARFMEKQAQISAARLEAKIGTVQQCLVDAIEGDIA
                     VARSKADAPEIDGLVHIQNADQVPLRVGEFVDVEITESDEHDLYGDALAAATRPAFDL
                     KML"
BASE COUNT          370 a          767 c          750 g          372 t
ORIGIN      
        1 caagctcgac gctacgcaac ggggcagtcg agcgagctcg actctactgg gccgcgtgca
       61 acggcggcgg gtacgcgcgg ccggcacgca gcggacggaa gtagtcggcg tcggcgtaga
      121 aggcggcatc ctgcctttca tgccagccgg gaatgcccgc caacggcagc ggccgcagct
      181 gcgctggatc ggtgatcgcc ctgccctcgc cgatggccgc ggccacctcg gcgatgcagc
      241 gatcatcatc atccccctgc accaccacgc acttgcccac cagcaggcgg cccggcagca
      301 gtgcctgttc catcagcgca tggccgaata ccgcagcgat ggcgatgtca ccgctgtgcc
      361 agcgcgtcgg ctcgaacacc gcaggccagt catgcccatc ccatgccgcg agcaacgcgt
      421 catcgcacac acgcacgatc acgccggttt cgtcgaactg ggtcagtgcc gcctgcgcgc
      481 ggttgcgctg gcccggcggc attgtctcga tatgccggca ttgctgcgcg ttgagtgctt
      541 gcttgagctg cgggaaacgg gcccacacca gtgcattgaa caggtcatgc cagttgtcgg
      601 cacgggtagc gatgcgtccc tgcgcgatac gcacctcgta gtgcaggccg tcagccagca
      661 gcgcagcgtc ctgctcgagc aggcgcttgc cgggcagcgc cagccgcgca tcaagcgcag
      721 cgatggacgg ccatgcagtg ccgcccagca ggtcacggaa gtcctgcagc ccgccaaaca
      781 gcggatgcct gaatgcctgc ggatcaaccg ccgcacgcgg cggcggcacg aagcgccggg
      841 ggccgccgtt gtcaccggcg gcggcggtca cagcatcttg agatcgaacg ccgggcgggt
      901 ggcggccgcc agcgcgtcac catacaggtc gtgctcgtcg ctctcggtga tctccacgtc
      961 gacgaattcg cctacgcgca gcggcacctg gtcggcgttc tggatgtgca ccaggccgtc
     1021 gatctccggc gcatcggcct tggaacgggc cacggcgatg tcgccttcga tggcatcgac
     1081 caggcactgc tgcacggtgc cgatcttggc ttccaggcgc gcggcggaaa tctgcgcctg
     1141 cttctccatg aagcgtgcca ggcgttcctg cttcacttcc tccggcacgg cgtcgggcag
     1201 atcgttggca gtggcgccct cgaccggcga gtaggcgaac gcacccacgc ggtccagctg
     1261 tgcttcgtcg aggaacgaca gcagctcttc gaactcggcc tcggtctcac ccgggaagcc
     1321 gacaatgaag gtcgaacgca cggtgatgtc cggcgcgatg cggcgccagt tctgcacgcg
     1381 ctccagagtc ttctcgaccg cgcccggacg cttcatcagg cgcaggatgc gcgggctggc
     1441 gtgctggaac gggatgtcca ggtacggcag gatgcggttc tcggccatca gcggcacgac
     1501 ttcgtccacg tgcggatacg ggtagacgta gtgcatgcgc acccacgcat ccagctcgga
     1561 caggccttcg cacagcgcct tcaggcgggt ctggtaggcc ttgtcgcgcc acatcttctc
     1621 ggcgtacttc acgtccacgc cgtaggccga ggtgtcctgc gacaccacca gcagttcacg
     1681 cacgccgcca cgcaccaggc gctcggcttc gcgcagcacc tcgtcgaccg ggcgcgagac
     1741 cagcttgccg cgcatcgacg ggatgatgca gaagctgcac ttgtggttgc agccctcgga
     1801 aatcttcagg taggcatagt ggcgcggggt cagcttgatg ccatagtcgg gcaccaggtc
     1861 cacgaacgga tcgtgcttgg gcggcagcgc ttcgtgcacc gcttccatca cgctctggta
     1921 gtcctgcggg ccggacaccg ccagcacgtt cgggtacgcc tcgcggatct gctccgggcg
     1981 cttgcccagg cagccggtga cgatgacctt gccgttctgg ttcatcgcct cgccgatcgc
     2041 gtccagcgac tcggtcactg ccgaatcgat gaagccgcag gtgttgacca ccaccacgtc
     2101 ggccgaatcg taggacggga cgatgtcgta gccctccgag cggagctggg tgaggatgcg
     2161 ctcggaatcg acgagggcct tcgggcagcc aaggctgacg aagccgactt tggggttcag
     2221 ctgggacatg gaatcgcggg actctggggg cctgggccc
//
LOCUS       DAOKIP010000349         2195 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.356,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000349 DAOKIP010000000
VERSION     DAOKIP010000349.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 2195)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2195)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2195
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.356"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(19..1134)
                     /locus_tag="QEL58_003940"
     CDS             complement(19..1134)
                     /locus_tag="QEL58_003940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkene reductase"
                     /protein_id="HDS1678366.1"
                     /translation="MLFTPHRLGALTLPNRIVMPPMTRSRATGGNVATAEMAAYYAQR
                     ASAGLIVSEGTQISPQGQGYAWTPGIHSDEQVQGWRQVTDAVHAAGGRIYAQLWHVGR
                     VSHVALQPGGVAPVSSSALLAEGVKVFVDPTGAGPEAGVGEMIQHSMPRALAEDEIPG
                     IIADYAQATRNALAAGFDGVELHGANGYLINQFIDSQANQRTDGYGGALQNRLRFLRE
                     VVQAVVAVAGGERVGVRLAPLTTLQGAVDDTPQATYLAAAHLLGELGVGYLHIAEADW
                     DDAPLMPVAFKQALRMVYPGTLIYAGKYTAERAEQALSEGWADLIGFGRPFIANPDLP
                     ERLRAGAELNPPDRATFFGGGAVGFTDYPALEAAVEA"
     gene            complement(1294..2166)
                     /locus_tag="QEL58_003941"
     CDS             complement(1294..2166)
                     /locus_tag="QEL58_003941"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EcsC family protein"
                     /protein_id="HDS1678367.1"
                     /translation="MNEPILLPRDIAHDARDWSDLQRAVTLLEAPTLTARMANLVGTP
                     LEFAVKALPKAVSGRIHGAVQAALSKSAQAALWSMDNSPGKGASTRWHKLAAATSGAV
                     GGAFGFAALFIELPVSTTIMMRAVADVARSEGFDLSEFSTRQACLEVFALGGNSPRDD
                     ASETGYYLARGFTTDVMRHLSAELAGRVVTGRDLTLGVAPKEAGKLLAKMVEKVAARF
                     GVVVTEKFAAQAVPIVGAAAGATLNTMFTDYYQDMARGHFIVRRLERKYGEDVVRACY
                     DRVAHGGVLIEPTL"
BASE COUNT          354 a          772 c          740 g          329 t
ORIGIN      
        1 gcagaccggc catcggcgtc aggcctcgac ggccgcttcc agcgccgggt aatcggtaaa
       61 cccgaccgca ccaccgccga agaacgtcgc ccgatccggt gggttcaatt cggcacccgc
      121 gcgcaggcgc tcgggcagat ccggattggc gatgaacggc cggccgaagc cgatcaggtc
      181 ggcccagcct tcagacagcg cctgctcggc gcgctcggcg gtgtacttgc cggcatagat
      241 cagcgtgccc gggtagacca tgcgcagcgc ctgcttgaac gcgaccggca tcagcggcgc
      301 atcatcccag tcggcctcgg cgatatgcag gtagcccacg ccaagttcgc ccaacaggtg
      361 cgcggccgcc aggtaagtcg cctgcggcgt atcgtccacc gcgccctgca gcgtggtcag
      421 cggcgccagg cgcacgccga cgcgctcacc accggccacc gccaccaccg cctgcaccac
      481 ctcgcgcagg aagcgcagcc ggttctgcaa tgcaccgccg tagccgtcgg tgcgctggtt
      541 ggcctgcgag tcgatgaact ggttgatcag gtagccattg gcgccgtgca gttcgacgcc
      601 atcaaagccg gcagctaggg cattgcgggt ggcctgcgcg tagtcggcga tgatgcccgg
      661 aatctcatcc tcggccagtg cacgcggcat cgagtgctgg atcatttcgc ccacgcccgc
      721 ctccgggcct gcgccggtcg ggtcgacgaa caccttcacg ccttcggcca gcaacgccga
      781 ggaagacacc ggcgccacgc ccccgggctg cagggccacg tgcgaaacac gaccgacgtg
      841 ccacagctgc gcgtagatgc gaccgccggc ggcatgcacg gcatcagtca cctggcgcca
      901 gccctgcacc tgctcatcgc tgtggatgcc gggcgtccag gcgtaaccct ggccctgcgg
      961 gctgatctgg gtaccttcgc tgacgatcag gccggcgctg gcacgctgcg cgtagtaggc
     1021 ggccatttcg gcggtagcga cattgccgcc cgttgcacgc gagcgtgtca tcggcggcat
     1081 cacgatgcgg ttgggcaggg tcagggcgcc caggcggtgg ggggtgaaca gcatggcggc
     1141 aatctcttgc ggggggagta ccggcaagga tggggatgga gcccgcagca caacaggcgc
     1201 atcgtggcaa aacagttgtg cccggcaggc aaggatggcc tggcccgggg tcggatccct
     1261 tcgcgacgca aagggctctg acccccgagc cggttacagc gtcggctcga tcaacacgcc
     1321 accgtgcgcc acccggtcgt agcaggcgcg caccacgtct tcgccgtact tgcgttccag
     1381 ccggcgcacg atgaaatggc cgcgcgccat gtcctggtag taatcggtga acatggtgtt
     1441 gagcgttgca ccggctgccg cacccacgat cggcaccgcc tgtgcggcga acttttcggt
     1501 gaccaccacg ccgaaacggg cggccacctt ctccaccatc ttcgccagca gcttgccggc
     1561 ttccttcggc gccacgccca gggtcaggtc gcgccccgtc accacgcgcc cggccaattc
     1621 ggccgacagg tgccgcatca cgtcggtggt gaagccgcgg gccaggtagt agccggtctc
     1681 gctggcgtca tcgcgcggcg agttgccgcc cagcgcgaac acctccaggc aggcctggcg
     1741 ggtactgaac tcggacaggt caaagccctc gctgcgggcc acgtcggcca ccgcgcgcat
     1801 catgatggtg gtcgacaccg gcagctcgat gaacagtgca gcgaagccaa aggccccgcc
     1861 aaccgcgccc gaggtcgccg ctgccagctt gtgccagcgc gtggaggcgc ccttgccggg
     1921 gctgttgtcc atgctccaca gcgccgcctg cgccgacttc gacagcgccg cctgcaccgc
     1981 gccatggata cggccggaga ccgccttggg cagcgccttc accgcgaatt ccagtggcgt
     2041 gccgaccagg ttggccatgc gcgcggtcag ggtcggcgct tccagcaggg ttaccgcccg
     2101 ctgcaggtcg gaccagtcgc gggcatcgtg ggcgatgtcg cgggggagca ggatgggctc
     2161 gttcatggcg ccgatcttag cgccagggag ttgaa
//
LOCUS       DAOKIP010000350         2192 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.357,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000350 DAOKIP010000000
VERSION     DAOKIP010000350.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 2192)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2192)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2192
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.357"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(10..2088)
                     /locus_tag="QEL58_003942"
     CDS             complement(10..2088)
                     /locus_tag="QEL58_003942"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017169463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S9 family peptidase"
                     /protein_id="HDS1678368.1"
                     /translation="MKLRHALLPLSLLAALPSVAAARGLEVRDMVAMDRVSAPVLTAD
                     GGTVVFAKRSVDANLKASTALFARNLLTRDAAPPKQITPAGWNVNSASLSADGQTVYF
                     LSARNGSQQLYAQPISGGTPRQLTDFAVDVDSYHVSPQDDRVLFSAGVFQACASDLAC
                     TDKKLKDNKDAKASGKVFDSLFVRHWDTWNDGRRNTLFVAPLPAAKAGPVKGASALSA
                     TIDGDAPSKPFGGNDDFAWSPDGASVVASIRVAGKQEPWSTNFDLYRFDAAGKQAPVN
                     LTASNPAWDAGPVFSADGKTLFYRAMKRPGFEADRFGLMAMDLASGKTREIAPQWDRS
                     AGGIALSADGASIYTTADDLGEHPLFQIDVASGKATKLIGDGSVTAVDVAGNSVAITR
                     NSLKSNDQVLVGLLPAAGQPIGELRALTPAAGEVLKDVSFGDYEQFEFKGWNNDTVHG
                     YVVKPHNYQEGKSYPVAFLIHGGPQGSFGNGWSYRWNPQTYAGQGYAVVMIDFHGSTG
                     YGQAFTDAISQHWGDRPLEDLQKGWDAALKKYSFLNGDKACALGASYGGFMVNWIAGN
                     WNGPFKCLVNHDGVFDQRMMGYATEELWFTEWEQGGTPYQKAANYEKFNPVNHVADWK
                     KPILVIHGQQDFRIPVEQGLAAFTAAQRQGIESKFLYFPDENHWVLKPNNSILWHDTV
                     NAWLKQHIGE"
BASE COUNT          341 a          713 c          743 g          395 t
ORIGIN      
        1 cggaggcgct tactcgccga tgtgctgctt cagccaggca ttgacggtgt catgccacag
       61 gatgctgttg ttcggcttca acacccagtg gttctcgtcc gggaagtaca ggaacttcga
      121 ttcgatgccc tgccgctgtg ccgcggtgaa cgcagccagc ccctgctcga ccggaatgcg
      181 gaagtcctgc tggccgtgga tgaccaggat cggcttcttc cagtccgcca cgtggttgac
      241 cgggttgaac ttctcgtagt tcgcggcctt ctggtacggc gtaccgccct gctcccactc
      301 ggtgaaccac agttcttcgg tggcgtaacc catcatgcgc tggtcgaaca cgccgtcatg
      361 gttgaccagg cacttgaacg ggccgttcca gttgccggcg atccagttga ccatgaagcc
      421 accgtagctg gcgcccagtg cacaggcctt gtcaccgttg aggaaggaat acttcttcag
      481 cgccgcgtcc cagcccttct gcaggtcttc cagcgggcgg tcgccccagt gctggctgat
      541 cgcatcggtg aaggcctggc cgtaaccggt ggaaccgtgg aagtcgatca tcaccaccgc
      601 gtagccctgg cccgcgtacg tctgcgggtt ccagcggtag ctccagccgt tgccgaagct
      661 gccctgcggg ccgccgtgga tcaggaacgc gaccgggtag gacttgcctt cctggtagtt
      721 gtgcggcttg accacgtagc cgtgcacggt gtcgttgttc cagcccttga actcgaactg
      781 ctcgtagtcg ccgaaggaca cgtccttcag cacctcgcca gcggccgggg tcagcgcgcg
      841 cagctcgccg atcggctggc cagcggccgg cagcaggccg accagcacct ggtcgttgct
      901 cttcaggctg ttgcgggtga tcgccacgct gttgccggcc acgtcgaccg cggtcacgct
      961 gccgtcgccg atcagcttgg tggccttgcc gctggccacg tcgatctgga acagcgggtg
     1021 ttcgccgagg tcatcggcgg tggtgtagat gctggcgcca tcggcggaca gggcaatgcc
     1081 accggccgag cgatcccact gcggggcgat ctcgcgggtc ttgccgctgg ccaggtccat
     1141 cgccatcagg ccgaagcggt cggcctcgaa gcccgggcgc ttcatcgcgc ggtagaacag
     1201 ggtcttgccg tcggcgctga acaccgggcc ggcatcccag gccgggttgg acgcggtcag
     1261 gttgaccggt gcctgcttgc cggcggcgtc gaagcggtac aggtcgaagt tggtcgacca
     1321 cggctcctgc ttgccagcca cgcggatgct ggccaccacg ctggcgccat ccggcgacca
     1381 cgcgaagtca tcattgccgc cgaacggctt ggacggtgca tcgccatcga tggtcgcgct
     1441 cagcgccgac gcacccttga ccggaccggc cttggccgcc ggcagcggcg ccacgaacag
     1501 ggtgttgcgg cggccgtcat tccaggtatc ccaatggcgc acgaacagcg aatcgaagac
     1561 cttgccgctg gccttggcgt ccttgttgtc cttgagcttc ttatcggtgc aggccaggtc
     1621 cgaggcacag gcctggaaca cgccggcgct gaacagcacg cggtcgtcct gcggcgacac
     1681 gtggtagctg tccacgtcga ccgcgaaatc ggtcagctgg cgcggggtgc caccgctgat
     1741 cggctgtgcg tacagctgct ggctgccgtt ccgggcactg aggaagtaca cggtctggcc
     1801 atcggccgac agtgaagcgg aattgacgtt ccagccggcc ggggtgatct gcttcggcgg
     1861 tgccgcatca cgggtgagca ggttgcgtgc gaacagcgcg gtggaggcct tcaggttggc
     1921 gtccacgctg cgcttggcga acaccacggt gccaccgtcc gcggtcagta ccggcgcgga
     1981 gacgcggtcc atggccacca tgtcgcggac ttccaggcca cgggcagcgg cgacgctggg
     2041 cagggcggcc agcaggctca gtggcagcag ggcatgacgc agtttcatcg gggtctccgc
     2101 aggacggcaa aaaaccgatg ttaggcccgt gcgggcgggg ctgccaaggc catcggtcat
     2161 ggctgcgtgc gggcagccgc cagaaacagc aa
//
LOCUS       DAOKIP010000351         2191 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.358,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000351 DAOKIP010000000
VERSION     DAOKIP010000351.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 2191)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2191)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2191
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.358"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(49..786)
                     /locus_tag="QEL58_003943"
     CDS             complement(49..786)
                     /locus_tag="QEL58_003943"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005411201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1678369.1"
                     /translation="MNRLIWLALALLPGAALADEGVIYRCMSSSSDIPTLQRTPCPAG
                     STQQVVRVPAPSSPQPAVVERPQALAPVPPPVPQASEPAAAPATPAAPRRADQGRTIM
                     EAGMVEREGGDQILDSATLQREAEARAASGDGPPKPPLPPIFQCTDSQGGGYLHEYEA
                     APGRCELMTVQGLGGATPVNAAGCEVVRDRCEALPEAQRCGSWQQRFRDARGRERFAA
                     PENRDTARGERERLQGVLEASNCPVPG"
     gene            complement(822..1517)
                     /locus_tag="QEL58_003944"
     CDS             complement(822..1517)
                     /locus_tag="QEL58_003944"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005414608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4124 domain-containing protein"
                     /protein_id="HDS1678370.1"
                     /translation="MTLLRAALSLSLLLPWTASAAEAEDVRVYRCVASNGAVALQDRP
                     CNSGRQEVRDLQRPRDPAPRVVRSDAAPPLPSETPVIREREVRHVYIQPPQPMYECVS
                     DDGRRYTSDNNEGNPRWVPLWTSVWLPRGHHGPAYPGPRPAIGTPVGTPIGEGAGYRP
                     PAVGVGVQVPAGNVLVRDSCHALPPQEVCARLRDHRWELNRRYNSALQSERTAISNEQ
                     RGIDARLSRDCQR"
     gene            complement(1561..2151)
                     /locus_tag="QEL58_003945"
     CDS             complement(1561..2151)
                     /locus_tag="QEL58_003945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010481169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Sua5/YciO/YrdC/YwlC family protein"
                     /protein_id="HDS1678371.1"
                     /translation="MKPHAGPVAAMKELTLDSAVATLRAGGVIAYPTEAVWGLGCDPS
                     HEAAVHMVLRLKQRPIEKGMILVAAELAQLEGWVRLQALPDARQRAVLASWPGANTWI
                     LPAGPRAQPWVTGEHSGIAVRISAHPLVAALCRCWGGPLVSTSANLAGEPPARSREEL
                     DPRLLRLLDGILDGQTGGLAQPTPIRDALSGNVLRS"
BASE COUNT          271 a          752 c          816 g          352 t
ORIGIN      
        1 ttcagatgat tgcagttgcc ggccagcggc cggcactccc ggtggctgtc accccggcac
       61 cgggcagttg ctggcctcca gcacgccctg cagccgttcg cgttcaccgc gcgcggtatc
      121 gcggttctcc ggtgcggcga atcgctcgcg gccgcgtgca tcgcggaagc gttgctgcca
      181 gctgccgcag cgttgcgcct cgggcagcgc ctcgcagcgg tcacgcacca cttcgcagcc
      241 tgctgcattc accggcgtgg cgccgcccag cccctgcacg gtcatcagtt cgcagcgccc
      301 gggggcggcc tcgtactcgt gcaggtagcc accgccctgg ctgtcggtgc actggaagat
      361 cggtggcaac ggcggtttcg gtggcccgtc gccggatgcg gcgcgggcct cggcttcgcg
      421 ttgcagcgtc gcgctgtcga gaatctggtc gccgccttcg cgttcaacca tgcctgcttc
      481 catgatcgtg cgcccctggt ccgcgcgccg tggtgccgcg ggcgttgcag gcgctgcagc
      541 gggttcgctg gcctggggaa ccggtggcgg aaccggagcc agcgcctgtg ggcgttcaac
      601 cacggcgggt tgcgggctgg agggcgccgg cacgcgcacg acctgctgcg tgctgcctgc
      661 cgggcagggc gtgcgctgca gggtagggat gtcactgctg ctggacatgc agcggtagat
      721 cacgccctcg tcagccaatg cagcgccggg cagcagggcc agggccagcc agatcaatct
      781 gttcatgcgt acagcgtaca ggctgcgctg ggacgccgcg ctcagcgctg gcaatcgcgc
      841 gacaggcgcg catcgatgcc gcgttgctcg ttgctgatgg cggtgcgttc gctctgcagc
      901 gcgctgttgt agcgccggtt cagttcccag cggtggtcgc gcaggcgcgc gcagacttcc
      961 tgcggcggca gcgcgtggca gctgtcgcgg accagcacgt tgccggccgg gacctgcacg
     1021 cctaccccca ccgcaggcgg gcgatacccc gcgccttcgc caatgggcgt accgaccggc
     1081 gtgccgatgg ccggtcgcgg cccgggatat gccgggccgt gatgcccacg cggaagccag
     1141 acgctggtcc acagcgggac ccagcgcgga ttgccttcgt tgttgtcgct ggtatagcgc
     1201 cggccatcgt cactcacgca ttcgtacatc ggctgcggtg gctggatgta gacgtggcgg
     1261 acttcgcgct cgcgaatgac cggcgtctcg ctgggcagcg gcggtgcggc atcgctgcgt
     1321 accacgcggg gggcggggtc acgcggacgc tgcaggtcgc gtacttcctg gcggccgctg
     1381 ttgcacggcc ggtcctgcag ggcgacggcg ccgttgctgg ccacgcagcg gtacacgcgc
     1441 acgtcctcgg cctcggcggc gctcgccgtc cacggcagca gcaggctcag gctcagggcg
     1501 gcgcgcagca gggtcatggc ggcagggtgc gtgattgtcc gcggcagcgc aatcgtcggc
     1561 tcaggagcgc agcacgttgc cgctgagtgc atcgcggatc ggggtgggct gggccaggcc
     1621 gccggtctgt ccatcgagga taccgtcgag caggcgcagc aggcgtgggt ccagctcttc
     1681 gcggctgcgt gccggtggtt ccccggccag gttggcgctg gtggaaacca gcgggcctcc
     1741 ccagcagcgg cacagtgcgg ccaccagcgg gtgggcgctg atgcgcaccg cgatgccgct
     1801 gtgctcgccg gtgacccagg gctgcgcacg cgggccggcc ggcaggatcc aggtgttggc
     1861 accgggccag ctggccagca ccgcgcgctg gcgcgcgtcg ggcagcgcct gcaggcgcac
     1921 ccagccttcc agctgcgcga gttcggcggc caccaggatc atgcctttct cgatcgggcg
     1981 ctgcttcagc cgcagcacca tgtgcacggc ggcttcgtgc gaaggatcgc agccgaggcc
     2041 ccagaccgct tcggtcgggt aggcgatcac gccgcccgcg cggagcgtgg cgacagcaga
     2101 gtccagggtg agttctttca tggcggcgac cggcccggcg tggggcttca ttatccccct
     2161 gctgcgtgca gaacgggtgg aacggtgccg c
//
LOCUS       DAOKIP010000352         2124 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.359,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000352 DAOKIP010000000
VERSION     DAOKIP010000352.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 2124)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2124)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2124
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.359"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            76..714
                     /locus_tag="QEL58_003946"
     CDS             76..714
                     /locus_tag="QEL58_003946"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005408421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY-associated TM helix domain-containing
                     protein"
                     /protein_id="HDS1678372.1"
                     /translation="MSRPASSTVQQQQSRGFWLRTLHQWHWISSAVCLIGMLLFAVTG
                     LTLNHAAKIEAKPEVQNQHLELPAELLGQLGTREDGNAPIPRPARQWLDTQLGIAIGG
                     RPAEWSAEEIYLSLPRPGGDAWLSIDRETGAVEYESTSRGVVSYLNDLHKGRNAGPAW
                     GWFLDLFAVACLVFCITGLFLLHLHARQRRMTWPLVGLGLMIPLLIALLLIH"
     gene            742..1260
                     /locus_tag="QEL58_003947"
     CDS             742..1260
                     /locus_tag="QEL58_003947"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017163219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2271 domain-containing protein"
                     /protein_id="HDS1678373.1"
                     /translation="MRVTLTIALSGLLATSPAYAATLDINVEVPKLNVAEYHRPYVAV
                     WLEGADQKVAANLSVWYQQTSNSEGHGTKWLPDLRQWWRKSGRTLQVPVDGVTGPTRP
                     AGKHALSFTDKQPALKQLAPGNYTLVVEAVREVGGRELLKIPFTWPATAAQNGKAQGA
                     TELGQVTLAVKP"
     gene            1336..>2124
                     /locus_tag="QEL58_003948"
     CDS             1336..>2124
                     /locus_tag="QEL58_003948"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019237449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4198 domain-containing protein"
                     /protein_id="HDS1678374.1"
                     /translation="MKRTLVLAAALAAALPFSALAHKAWLLPSQTVIAGNAPWITVDG
                     AVSNDLFYFNHVPLRLESLVITAPDGSTVQPQNASTGKYRSVFDLELKQPGTYRIASV
                     NDGLFATYEQNGERKRWRGSVATFGELPKDAKKLEVSQSIGRVETFVTNGAPNDTALK
                     PTNRGIELVAVGHPNDLFAGEEATFRVLVDGKPTAGLEFEIVRGATRYRNAQDELKLT
                     SDAKGEIKVTWPEAGMYWLETATEDKKTSVKQAAKRRLSYVATLE"
BASE COUNT          383 a          753 c          664 g          324 t
ORIGIN      
        1 acagaacgac acgcaattgc gagctattct catcaatgat gtaatgagca gtccccatcc
       61 gccccgaacc gtgccgtgag ccgtcctgct tcttccaccg tgcagcagca acagagccgt
      121 ggcttctggc tgcgtacgct gcaccagtgg cactggatca gctcggcggt gtgcctgatc
      181 ggcatgctgt tgttcgcggt gaccggcctg accctcaacc atgcggcgaa gatcgaggcc
      241 aagcccgagg tgcagaacca gcacctggaa ctgccggccg agctgctggg ccagctgggc
      301 acgcgcgagg acggcaacgc gccgatcccg cgtccggccc ggcaatggct ggacacccag
      361 ctgggcatcg ccattggcgg gcgcccggcc gagtggtcgg ccgaggagat ctacctgtcg
      421 ctgccgcgcc ccggtggcga cgcctggctg agcatcgatc gcgaaaccgg cgcggtggag
      481 tacgaatcaa cctcgcgtgg cgtggtgtcc tacctcaacg acctgcacaa gggccgcaac
      541 gcgggcccgg catggggctg gttcttggac ctgttcgccg tggcctgcct ggtgttctgc
      601 atcaccggcc tgttcctgct gcacctgcat gcgcggcagc ggcgcatgac ctggccgctg
      661 gtcggcctgg gcctgatgat tccgctgctg atcgccctgc tgctgatcca ctgacttttc
      721 cctcgttccc ggagccgctc catgcgcgtc accctgacca tcgccctcag cggcctgctg
      781 gccacctcgc cggcctacgc cgccaccctc gacatcaacg tcgaagtgcc caagctcaac
      841 gtggccgaat accaccgccc gtatgtggcg gtgtggctgg aaggcgccga ccagaaggtc
      901 gcggccaacc tgtcggtctg gtaccagcag accagcaaca gcgaaggcca tggcaccaag
      961 tggttgcccg acctgcgcca gtggtggcgc aagagcggcc gcaccctgca ggtgccggtg
     1021 gacggcgtga ccggcccgac ccgcccggcc ggcaagcacg cgctgtcgtt caccgacaag
     1081 cagccggcgc tgaagcagct ggcaccgggc aactacaccc tggtggtcga agcggtgcgt
     1141 gaagtcggcg gccgtgaact gctgaagatc cccttcacct ggccggccac cgccgcgcag
     1201 aacggcaagg cgcagggcgc caccgaactg ggccaggtca ccctcgccgt caaaccctga
     1261 aaaagggacg gaggggatta agtcgtaatc ccctcgccct tgtcgcacca ccccgcatcc
     1321 actggagtct tccgcatgaa gcgcacgctc gtcctcgccg ccgccctggc cgctgccctt
     1381 cccttctccg ccctggccca caaggcctgg ctgctgccct cgcagaccgt gatcgccggc
     1441 aatgcgccgt ggatcaccgt cgacggtgcg gtctccaacg acctgttcta cttcaaccac
     1501 gtgccgctgc gcctggaatc gctggtgatc accgccccgg atggcagcac cgtgcagccg
     1561 cagaacgcgt ccaccggcaa gtaccgcagc gtgttcgacc tcgaactgaa gcagccgggc
     1621 acctatcgca tcgcctcggt caatgacggc ctgttcgcca cctacgagca gaacggcgag
     1681 cgcaagcgct ggcgcggcag cgtcgccacc ttcggcgaac tgccgaagga cgcaaagaag
     1741 ctggaagtga gccagtcgat cggccgcgtg gaaaccttcg tcaccaacgg tgcgccgaat
     1801 gacaccgcac tgaagccaac caaccgcggc atcgagctgg ttgccgtcgg ccacccgaac
     1861 gacctgttcg ccggtgagga agccaccttc cgcgtgctgg tcgatggcaa gccgaccgct
     1921 ggcctggagt tcgagatcgt gcgtggcgcc acccgctacc gcaatgcgca ggacgaactg
     1981 aagctgacca gcgacgccaa gggcgagatc aaggtgacct ggccggaagc cggcatgtac
     2041 tggctggaaa ccgccaccga agacaagaag acctcggtga agcaggccgc caagcgccgc
     2101 ctgagctacg tcgccacgct ggaa
//
LOCUS       DAOKIP010000353         2061 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.360,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000353 DAOKIP010000000
VERSION     DAOKIP010000353.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 2061)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2061)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2061
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.360"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            76..2040
                     /locus_tag="QEL58_003949"
     CDS             76..2040
                     /locus_tag="QEL58_003949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M2 family metallopeptidase"
                     /protein_id="HDS1678375.1"
                     /translation="MKHRHLLLASAIAAATLALVACKKEPSPGTETAGPSAPAGETAD
                     QFVARINAEFKAAYPEMTSAQWLSSTYINSDSERIAAKANERSLTQLNSWIEQAAKFD
                     GKPMSEDSKRAIHLLKLMSSMPAPRDPAKLAELTQIATRMEGSYGAGKYCTDANDPNS
                     CRQLGELEQVLARSRDYDKQLDAWQGWHSTTKSMRGDYQKFVGLVNEGAKGMGFTDAG
                     QMWRSGYDMPPEQIGPETDRLWEQVKPMYEQLHCYARGKLDKTYGKDKAEVGNGLIAA
                     HLLGNMWQQDWSNLWDQLEPYPGAGSLDITAALEKQYQSNLSAALAKAGKDANVAAQY
                     KAQREAELRTARQMTERAQDFYVSLGMPSLPQSYWEKTQFIKPDDRDVVCHASAWDMN
                     MEGDVRTKMCIKPNEENFTTIYHELGHIYYDLAYNPLPPLFQGGANDGFHEAIGDTIV
                     LAMTPKYLSSIGLVDAPTESREAVINNQMRMALSGVSFLPFGLMIDRWRWGVFDGSIT
                     ADNYNKAWWDLKAKYQGVAPASTRGEEFFDPGAKYHVPGNTPYTRYFLARILQFQFYK
                     GLCDAAGYKGPLHECTFYGNKEAGQKYWAMLSKGASQPWQATLKELTGTDKLDAGPMI
                     EYFTPVNEWLKQQNEGQMCGWQANAAPAAK"
BASE COUNT          438 a          689 c          651 g          283 t
ORIGIN      
        1 accgacttcc gccacttgcg gtggcagcgg ctgcccacta gccttcggcc gtcgttcacc
       61 acccaaggac cgcccgtgaa acaccgccat ctcctgctgg cctcggcgat cgccgccgcc
      121 acgctggccc tggtcgcctg caagaaggaa ccgtcgcccg gcaccgagac cgccggcccc
      181 agcgcgccgg ccggcgaaac cgccgaccag ttcgtggccc gcatcaatgc cgaattcaag
      241 gccgcctacc cggagatgac ctcggcgcag tggctgtcct ccacctacat caacagcgat
      301 tccgaacgca tcgcggccaa ggccaacgag cgctcgctga cccagctcaa cagctggatc
      361 gagcaggccg ccaagttcga cggcaagccg atgagcgagg acagcaagcg cgccatccac
      421 ctgctgaagc tgatgtcctc gatgccggcg ccgcgcgacc cggccaagct ggctgagctg
      481 acccagatcg ccacccgcat ggagggcagc tacggggccg gcaagtactg caccgatgcc
      541 aacgatccga actcctgccg ccagctgggc gaactggagc aggtactggc gcgcagccgc
      601 gactacgaca agcagctcga tgcctggcag ggctggcaca gcaccaccaa gagcatgcgc
      661 ggcgattacc agaagtttgt cggcctggtg aacgaaggtg ccaagggcat gggcttcacc
      721 gatgccgggc agatgtggcg cagcggctac gacatgccgc cggagcagat cggcccggaa
      781 accgaccgcc tgtgggaaca ggtcaagccg atgtacgagc agctgcactg ctacgcacgc
      841 ggcaagctgg acaagaccta cggcaaggac aaggccgaag tgggcaatgg cctgatcgcc
      901 gcgcacctgc tgggcaacat gtggcagcag gactggtcga acctgtggga ccagctggaa
      961 ccgtaccccg gtgccggcag cctggacatc accgcagcgc ttgaaaagca gtaccagagc
     1021 aacctgagcg ccgcgctggc caaggccggc aaggatgcca acgtggccgc gcagtacaag
     1081 gcgcagcgcg aggccgaact gcgtaccgcc aggcagatga ccgagcgcgc gcaggacttc
     1141 tacgtgtcgc tgggcatgcc ctcgctgccg cagtcgtact gggaaaagac ccagttcatc
     1201 aagcccgatg accgcgacgt ggtctgccac gccagcgcct gggacatgaa catggaaggc
     1261 gatgtgcgca ccaagatgtg catcaagccg aacgaagaga acttcaccac catctaccac
     1321 gagctgggcc acatctatta cgacctggcc tacaacccgc tgccgccgct gttccagggc
     1381 ggtgccaacg atggcttcca tgaagcgatc ggcgacacca tcgtgctggc gatgaccccc
     1441 aagtacctca gctcgatcgg cctggtcgat gcgccgaccg agagtcgtga ggcagtcatc
     1501 aacaaccaga tgcgcatggc gctgtcgggc gtgtcattcc tgccgttcgg gctgatgatc
     1561 gaccgctggc gctggggcgt gttcgacggt tcgatcaccg ccgacaacta caacaaggca
     1621 tggtgggacc tgaaggccaa gtaccagggc gtggccccgg ccagcacccg tggcgaagag
     1681 ttcttcgacc cgggcgcgaa gtaccacgtg ccgggcaaca ccccgtacac ccgctacttc
     1741 ctggcgcgca tcctgcagtt ccagttctac aagggcttgt gcgatgcggc cggctacaag
     1801 ggcccgctgc atgagtgcac cttctacggc aacaaggaag ccggccagaa gtactgggcg
     1861 atgctgagca agggtgccag ccagccgtgg caggccacgc tgaaggaact gaccggcacc
     1921 gacaagctcg atgccggccc gatgatcgag tacttcaccc cggtcaacga gtggctgaag
     1981 cagcagaatg aaggccagat gtgcggctgg caggccaacg cggcccctgc ggcgaaatga
     2041 aagaggggcg gatccgcaag g
//
LOCUS       DAOKIP010000354         2056 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.361,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000354 DAOKIP010000000
VERSION     DAOKIP010000354.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 2056)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2056)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2056
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.361"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            110..2020
                     /locus_tag="QEL58_003950"
     CDS             110..2020
                     /locus_tag="QEL58_003950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CocE/NonD family hydrolase"
                     /protein_id="HDS1678376.1"
                     /translation="MRVRAVAVAIALCLSSTVLAADTPPMTPDISGKPFVAPDVGRDY
                     DKRVVMVPMRDGTKLYTVIVVPKGAHNAPILLTRTPYDAAGRANRSDSPRMRDLLPQG
                     DEVFVDGGYIRVFQDIRGKYGSEGDYVMTRPLRGPLNNTKVDHSTDAWDTIDWLVKNV
                     PESNGKVGMLGSSYEGFTVVMALTDPHPALKVAAPQSPMVDGWMGDDWLNYGAFRQVN
                     FNYFAMQTEKRGKGTPLPSLGYDDYSTFLRIGSAGDYARFTGVDQLTWWKKLVEHPAY
                     DAFWQGQALDAVMARTPLKVPTMWLQGLWDQEDMWGANHAYQAMEGRDSGNNRNYLVM
                     GPWRHSQVNYSGSELGALKFDGDTALQFRRDVLKPFFDQYLVDGAPKADTPPVLIYNT
                     GENHWDRLKGWPRSCDKGCAASSKPLYLRAGGKLAFQAPAAGEGDFEEYVSDPAKPVP
                     FVPRPVRFSDRDMWTTWLVKDQRFVDGRPDVLTFITEPLSAPLRIGGAPVVHLQASTS
                     GTDSDWVVKLIDVYPDQEASTPEMGGYELPVSLAIFRGRYRESFSDPKPLAANEVLPY
                     RFDLPNANHTFQKGHRVMVQVQSSLFPLYDRNPQTYVPNIYLARPGDYQKATQRVWHS
                     AAQASYIDLPVY"
BASE COUNT          376 a          666 c          679 g          335 t
ORIGIN      
        1 acatgtgcca tcagtcctgc ctgtatccac cgcagaatgc aaagcccgcc cacacttcac
       61 ggcacatggc aggagtaggc ttgaggcttt cctgccggga ggggtctcca tgcgtgtgcg
      121 tgccgttgct gtagccatcg ccctttgcct gtccagcacc gtgctggctg ccgatacccc
      181 gccgatgacc ccggacatca gcggcaaacc cttcgttgcg ccggatgtcg gccgcgacta
      241 cgacaagcgc gtggtgatgg tgccgatgcg cgatggcacc aagctgtata cggtgatcgt
      301 ggtgcccaag ggtgcccaca atgcgcccat cctgctgacc cgcacgccct acgatgccgc
      361 tggccgcgcc aaccgcagtg attcgccgcg catgcgcgac ctgctgccgc agggcgacga
      421 ggtgtttgtc gacggcggtt acatccgcgt gttccaggac atccgtggca agtatggctc
      481 cgagggggat tacgtgatga cccggccgct gcgcgggccg ttgaacaaca ccaaggtcga
      541 ccattccacc gacgcctggg acaccatcga ctggctggtg aagaacgtgc ccgagagcaa
      601 cggcaaggtc ggcatgctcg gttcatcgta tgaaggtttc accgtggtga tggcactgac
      661 cgacccgcac ccggcgctga aggtggccgc accgcagagc ccgatggtgg atggctggat
      721 gggtgacgac tggctcaact acggtgcgtt ccgccaggtc aacttcaact acttcgcgat
      781 gcagaccgag aagcgcggca agggcacgcc gctgcccagc ctcggctacg acgactacag
      841 caccttcctg cgcatcggtt cggccggcga ctacgcacgt ttcaccggcg tggaccagct
      901 gacctggtgg aagaagctgg tcgagcaccc ggcctatgac gccttctggc aaggccaggc
      961 gctggacgcg gtgatggcca ggacgccgtt gaaggtaccc accatgtggc tgcagggcct
     1021 gtgggaccag gaagacatgt ggggcgccaa ccacgcctac caggcgatgg aagggcgcga
     1081 cagtggcaac aaccgcaatt acctggtgat gggcccatgg cggcacagcc aggtgaacta
     1141 cagcggcagt gaactgggcg ccctgaagtt cgatggcgat accgcgctgc agttccgccg
     1201 cgatgtgctc aagccgttct tcgaccagta ccttgtggac ggtgcaccca aggccgacac
     1261 gccgccggtg ctgatctaca acaccggcga aaaccactgg gaccgcctga agggctggcc
     1321 gcgcagctgc gacaagggct gtgccgccag cagcaagccg ctgtacctgc gtgccggcgg
     1381 caagctggcg ttccaggcgc cggcggcagg cgagggcgac ttcgaggaat acgtgtccga
     1441 tccggccaag ccggtgccgt tcgtgccgcg accggtgcgc ttcagcgacc gcgacatgtg
     1501 gaccacctgg ctggtcaagg accagcgctt cgtcgatggc cgcccggacg tgctgacctt
     1561 catcaccgaa ccgctgagcg cgccgctgcg cattggcggt gcgccggtgg tgcacctgca
     1621 ggcatcgacc agtggtaccg acagcgactg ggtggtgaag ctgatcgacg tgtatccgga
     1681 ccaggaagcg tcgacgccgg agatgggcgg ctacgagctg ccggtgtcgc tggcgatctt
     1741 ccgcggccgt taccgtgaga gcttcagcga tccgaagccg ctggctgcca acgaagtgct
     1801 gccgtaccgc ttcgatctgc ccaacgccaa ccacaccttc cagaaggggc accgggtgat
     1861 ggtgcaggtg cagtccagcc tgttcccgct gtacgaccgc aacccgcaga cctacgtgcc
     1921 gaacatctac ctggccaggc cgggcgacta ccagaaggcg acgcagcggg tctggcacag
     1981 cgccgcgcag gccagctaca tcgatctgcc ggtgtattga ggttgatgag gtgcgccggg
     2041 cacgcgatgc ccggcg
//
LOCUS       DAOKIP010000355         2024 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.362,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000355 DAOKIP010000000
VERSION     DAOKIP010000355.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 2024)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2024)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2024
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.362"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            34..1101
                     /locus_tag="QEL58_003951"
     CDS             34..1101
                     /locus_tag="QEL58_003951"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HDS1678377.1"
                     /translation="MDSLTQIVLGGAVAAAIAPPGHRRAALLAGAALGTLPDLDALWL
                     GFTAADPVANMVDHRSFSHSLLVLPWVATLIWWLFKRFGNGRVAQSPVRWFWAIQLAL
                     VTHPLLDAFTVYGTQLWWPLRPHPTMGSSVFIIDPAYTVWLLLGCVLAWFGRARPWAG
                     KALGVALLISSGYLGWGLMAKAQVDRAAQQSLAAMGLGDAPRFSVPMPFNTLLWRVVA
                     MTPNGYVVGDRSLVADQGPMRFEGHPSNVQALREASAIPAVQRLQWFNRGFMRAQVVE
                     GRLVLSDLRMGLEPDYTFNFAVAEQVDGQWRAIRPEQLRMDYSSPAARADVGRRLAAM
                     WQRIWQEPATSPGAVDHTAVH"
     gene            complement(1198..2013)
                     /locus_tag="QEL58_003952"
     CDS             complement(1198..2013)
                     /locus_tag="QEL58_003952"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003485197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HDS1678378.1"
                     /translation="MSSPTYLHGFSGTEQQRLMTQARLLESSIFGQIDYGGARRLLEV
                     GSGVGAQTEILLRRFPELHVTGVDLSETQLATARENLARTPWCSDRYTLQQADAGELP
                     FDARTFDSAFLCWVLEHVPSPARVLSEVRRVLAPGSPVYITEVMNASFLLDPYSPHIW
                     RYWMAFNDFQYDHGGDPFVGAKLGNLLLAGGFRDVHTEIKTIHLDNREPARRKTMIAF
                     WEQLLLSAADQLLQAGLVDEETVEGMRREFRLVQNDPNAVFFYSFVQGRATVY"
BASE COUNT          302 a          669 c          707 g          346 t
ORIGIN      
        1 acaaacgcgc ggccatcgcg ctagcatcgg ccaatggact ccctgaccca gatcgtgctc
       61 ggtggcgccg tcgccgctgc catcgcaccg cccggccatc gccgcgcggc cctgctggcc
      121 ggtgccgcgc tcggcaccct gcccgacctc gatgccctgt ggctgggctt cactgcggcc
      181 gacccggtcg ccaacatggt cgaccaccgc agcttcagcc attcgctgct ggtgctgccg
      241 tgggtggcga cgctgatctg gtggctgttc aagcgcttcg gcaacggtcg tgtcgcgcag
      301 tcaccggtac gctggttctg ggcgatccag ctggcgctgg tcacccatcc gctgctggat
      361 gcgttcaccg tctacggcac ccagctgtgg tggccgttgc ggccgcaccc gacgatgggc
      421 tccagcgtct tcatcatcga cccggcctat accgtgtggc tgctgctggg ctgcgtgctg
      481 gcctggttcg gccgcgcgcg gccgtgggcg ggcaaggcgc tgggcgtggc cctgctgatc
      541 agcagcggct acctgggctg gggcctgatg gccaaggcgc aggtcgatcg tgccgcccaa
      601 cagagcctgg ccgcgatggg cctgggcgat gcgccgcgct tctcggtgcc gatgccgttc
      661 aacaccctgc tgtggcgggt ggtggcaatg acgccgaatg gctacgtggt cggggaccgc
      721 tcgctggtgg ccgaccaggg cccgatgcgg ttcgagggcc atccgtccaa cgtgcaggcc
      781 ttgcgcgaag catctgcgat tccagccgtg cagcggctgc agtggttcaa ccgcggtttc
      841 atgcgcgcgc aggtggtgga gggccggttg gtgctgagcg atctgcgcat gggcctggag
      901 cccgactaca ccttcaactt cgcggtggcc gagcaggtcg atgggcaatg gcgggcgatc
      961 aggcccgagc agttgcgcat ggattacagc agtcctgccg cgcgcgctga cgtcggtcgc
     1021 cggttggccg cgatgtggca gcggatctgg caggagccgg cgacatcgcc gggtgcggtc
     1081 gaccacaccg ccgtgcattg atccgtagat ccacgccatg cgtggatggc gggacatcgg
     1141 cggcggcagc cacgcatggc gtggctctac tgcctcaatt ggcagtagaa cgtcggctca
     1201 atacaccgtc gcgcggccct gcacgaacga atagaagaac accgcgttcg ggtcgttctg
     1261 caccagacgg aactcgcggc gcatgccctc cacggtctcc tcgtccacca gcccggcctg
     1321 cagcagctgg tcggccgccg acagcagcag ctgctcccag aacgcgatca tcgtcttgcg
     1381 tcgggccggc tcacggttgt ccaggtggat ggtcttgatc tcggtatgca cgtcgcggaa
     1441 accgccggcc agcagcaggt tgcccagctt ggcaccgacg aacgggtcgc cgccgtggtc
     1501 gtactggaag tcattgaagg ccatccagta gcgccagatg tggggcgaat acggatcgag
     1561 caggaacgag gcattcatca cctcggtgat gtacaccggg gagcccggtg ccagcacacg
     1621 gcgcacttcg ctcagcacgc gcgccggtga cggcacgtgt tccagtaccc agcacaggaa
     1681 cgccgaatcg aaggtgcggg cgtcgaacgg cagttcgccg gcatcggcct gctgcagggt
     1741 gtagcggtcg ctgcaccacg gcgtgcgcgc cagattctcg cgtgcggtgg ccagctgcgt
     1801 ttcgctcagg tccacgccgg tcacgtgcag ctcggggaag cggcgcagca ggatctcggt
     1861 ctgcgcaccg acgccgctgc ccacttccag caggcgacgc gcaccgccgt agtcgatctg
     1921 gccgaagatg ctcgattcca gcaggcgcgc ctgggtcatc aggcgctgct gttcggtgcc
     1981 ggagaatccg tgcaggtagg tcggggaaga gatcggcggc gtca
//
LOCUS       DAOKIP010000356         2016 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.363,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000356 DAOKIP010000000
VERSION     DAOKIP010000356.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 2016)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2016)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2016
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.363"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..875)
                     /locus_tag="QEL58_003953"
     CDS             complement(<1..875)
                     /locus_tag="QEL58_003953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012481573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="epimerase"
                     /protein_id="HDS1678379.1"
                     /translation="MSLASPAGALPTRVLILGLGWSGRVLAAQLQARGVHVAGTVRDP
                     ASAPHDGVRRHQLRTDATLSPALLDDVAQADAVLCSVPPDTEGDPALRLLLPALQASP
                     ALRWVGYLSSTSVYADRAGGWIDETSVADATEVAGLQRRQAEAQWRALAEERGIASAV
                     MRLPGLYGPGRNALLQLAQGRARHVVRPGLVFNRLHVQDLAAVVIAAMRWPTPHAVYL
                     PADDEPAPPQDVLAFAAQLGGFAMPPAVAWDDPALSPTLRRFYESNKRIDSRRTREAL
                     GWEPRFSSYREGLRDL"
     gene            complement(872..1810)
                     /gene="panE"
                     /locus_tag="QEL58_003954"
     CDS             complement(872..1810)
                     /gene="panE"
                     /locus_tag="QEL58_003954"
                     /EC_number="1.1.1.169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014038900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-dehydropantoate 2-reductase"
                     /protein_id="HDS1678380.1"
                     /translation="MRILILGAGGTGGYFGGRLAQAGVDVTFLVRPARAAQLDRDGLV
                     IRSPLGDASFPVQHVTADALPALAAEKPFDLVILSCKAYDLDSSIDAIAPAVGADTTV
                     LPILNGLHHYNVLDARFGRDAVLGGLCFISATKAPDGAVLHLGKPAKLTFGERDGGTI
                     SARVQAFAAACAQASLEHLASEHIGQEQWIKYTFLTALAAATCLLRADIGSIVATDDG
                     QAIVRGLYDECLAVAEAAGEPVPDAAQETARGTLTQAGSALKASMLRDLEAGQQVEAE
                     QIVGDMLARARKADQEALLLQVAYSSLQAYQALRSA"
BASE COUNT          328 a          703 c          692 g          293 t
ORIGIN      
        1 aggtcgcgca ggccctcacg gtagctggag aagcgcggct cccagcccag cgcttcgcgc
       61 gtgcgacggc tgtcgatgcg cttgttgctt tcatagaagc gccgcaaggt cgggctcagc
      121 gctgggtcgt cccacgccac ggcaggcggc atcgcaaacc cgcccagctg cgcggcgaag
      181 gccagcacgt cctgcggcgg tgccggctca tcatcggccg gcaggtacac cgcatgaggt
      241 gtgggccacc gcatcgcagc gatgaccacc gccgccaggt cctgcacgtg cagccggttg
      301 aacaccaggc caggccgcac cacatggcgg gcacgccctt gcgccagctg cagcagcgca
      361 ttgcgaccgg gcccatacag gccgggcagg cgcatcaccg ccgaggcgat gccgcgttcc
      421 tccgcaagtg cacgccattg cgcttcggcc tgcctgcgtt gcaggccggc gacttcggtg
      481 gcgtccgcca cgctggtttc gtcgatccag ccgccggccc ggtcggcata caccgaggtc
      541 gacgacagat agccgaccca gcgcagcgca gggctggcct gcagtgcagg cagcaacagg
      601 cgcagtgcag gatcgccttc agtgtcgggt ggcacgctgc acagcacggc gtcggcctgc
      661 gctacatcgt cgagcagagc cggtgacagt gtcgcgtctg tgcgcagttg atggcgccgc
      721 acgccgtcgt gcggcgccga cgccggatcg cgcaccgtgc cggccacgtg cacgccccgc
      781 gcctgcagct gcgcggccag cacgcgcccg ctccagccca gcccgaggat cagcaccctg
      841 gtgggcaagg cacccgcagg cgaggcgagg ctcacgcgct gcgcagcgcc tggtaggcct
      901 gcaggctgct gtaggcgacc tgcagcagca gggcttcctg gtcggccttg cgcgcgcgcg
      961 ccagcatgtc gccgacgatc tgttcggcct ccacctgctg gccggcttcc aggtcgcgca
     1021 gcatcgatgc cttcagcgct gaaccggcct gggtcaaggt gccgcgcgct gtctcctgcg
     1081 cagcatcggg aaccggctca ccggccgctt cggccaccgc caggcattcg tcgtacaggc
     1141 cacgcacgat ggcctgccca tcatcggtgg caacgatgct gccgatatcc gcgcgcagca
     1201 ggcaggtggc cgcggccaac gcggtcagga aggtgtactt gatccactgc tcctggccga
     1261 tgtgctcgct ggccagatgc tcgaggctgg cctgcgcaca ggcggcggcg aaagcctgca
     1321 cgcgcgcgga gatcgtgccg ccatcacgct cgccaaaggt gagcttggcc ggcttgccca
     1381 ggtgcagcac cgcgccatcc ggcgccttgg tcgcgctgat gaagcacagg ccgccgagca
     1441 cggcgtcgcg gccgaagcgc gcgtccagca cgttgtagtg atgcagcccg ttcaggatcg
     1501 gcagcacggt ggtgtctgcg cccaccgcag gggcgatggc gtcaatcgag ctgtccaggt
     1561 cgtaggcttt gcagctgagg atgaccaggt cgaacggctt ctccgcagcc agtgcgggca
     1621 gggcgtcggc agtgacatgc tgcaccggga agctggcatc gcccagcggg ctgcggatga
     1681 ccagaccgtc gcggtccagc tgggcggcgc gtgcagggcg gaccaggaag gtcacgtcca
     1741 cgccggcctg ggccaggcgg ccgccgaagt aaccgccggt accgccggca ccgagaatca
     1801 ggatgcgcat tgcacgttca ccgtttctgg gggaatcaga cctgcgattg tgccggagat
     1861 tgcaggcaaa aaagagccga gcatgggctc ggctctacgc gcactacctt aaccacgcct
     1921 ggcgtggatc catcgtgtcg accaaggtcg acacccacca agagcggatc atgccatcca
     1981 gacaggttgc ggagtcatgc catccagaca gatcgc
//
LOCUS       DAOKIP010000357         1999 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.365,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000357 DAOKIP010000000
VERSION     DAOKIP010000357.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 1999)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1999)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1999
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.365"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            52..534
                     /locus_tag="QEL58_003955"
     CDS             52..534
                     /locus_tag="QEL58_003955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005411107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YajQ family cyclic di-GMP-binding protein"
                     /protein_id="HDS1678381.1"
                     /translation="MPSFDVVSEVDTHELTNAIDQANRELATRFDFKGVDAKFERDGD
                     VINQTAPTEFQLKQMNDILRARLAARGIDVLSLEFGDIETNLAQARQKITVKQGIEQK
                     IAKKIAAALKDAKLKVESQINGDKLRVQGKKRDDLQDAIAVLKAGKFELPLQFNNFRD
                     "
     gene            636..1202
                     /locus_tag="QEL58_003956"
     CDS             636..1202
                     /locus_tag="QEL58_003956"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005411108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1415 domain-containing protein"
                     /protein_id="HDS1678382.1"
                     /translation="MTDFHLPTDDPIAATRLWLERIVIGLNLCPFAKAVYVKDQVRIV
                     LSDATTPEALVEQLAEELVLLRDTPAEQIDTTLIVHPQVLTDFLDYNDFLDNADAAIE
                     ALDLQGILQVASFHPDYQFDGVAADDASNYTNRAPFPTLHLLREDSVARAVDVYPDPD
                     VIVERNIQTLDRIGVDGWHRRLRGEDLS"
     gene            1199..>1999
                     /locus_tag="QEL58_003957"
     CDS             1199..>1999
                     /locus_tag="QEL58_003957"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HDS1678383.1"
                     /translation="MSTVPPIAAWPVAPLQGKVVLVTGGANGIGRGIAQAVLGAGGRV
                     LIGDLDVEAGQACLDEWQRGDDAAFQRLDIADEASVRYFVAVALQRFGRIDGLVNNAG
                     IAGPHGTLLQDMAWEEWQRRLSSLHGAFLCSKHALPALSARTEGAIINIASTRAWQSE
                     AHSEAYAAAKGGLVAFTHALAISSGPAVRVNSISPGWIGTTAWQAPSRRHQPDYSATD
                     HAQHPVGRVGRPEDIGALAVYLLSSLSGFTTGQDFIVDGGMSRKMIYAE"
BASE COUNT          361 a          708 c          650 g          280 t
ORIGIN      
        1 gcaggccggc acgatagaat ggccctcact gaatcctgcg gagctgcgcc catgccttcc
       61 ttcgacgtcg tgtccgaagt cgacacccac gaactgacca acgccatcga ccaggccaac
      121 cgcgagctgg ccacccgctt cgacttcaag ggcgtggacg cgaagttcga acgcgatggc
      181 gatgtcatca accagaccgc gccgaccgag ttccagctca agcagatgaa cgacatcctg
      241 cgcgcccgcc tggccgcgcg cggcatcgac gtgctcagcc tggaattcgg cgacatcgag
      301 accaacctgg cccaggcccg gcagaagatc accgtcaagc agggcatcga gcagaagatc
      361 gccaagaaga tcgccgctgc actgaaggac gccaagctga aggtggaaag ccagatcaac
      421 ggcgacaagc tgcgcgtgca gggcaagaag cgcgacgacc tgcaggacgc cattgccgtg
      481 ctcaaggccg gcaagttcga gctgccgctg cagttcaaca acttccgcga ctgaggcctg
      541 cgccgggcgt gacccggcgc tgccaccggc aggtacgacg gcgcgttgcc ggcgacgcgc
      601 ctacaatggc ggccccgcca gccgacgtgc ccgccatgac cgatttccac ctgcccaccg
      661 atgatccgat cgccgccacc cgcctgtggc tggagcgcat cgtgatcggc ctgaacctgt
      721 gcccgtttgc caaggcggtg tacgtgaagg accaggtccg catcgtgctg agcgatgcga
      781 ccacgcccga ggcgctggtc gaacaactgg ccgaagaact ggtgctgctg cgcgataccc
      841 cggccgagca gatcgacacc acgctgatcg tgcacccgca ggtactgacc gacttcctcg
      901 actacaacga cttcctcgac aacgccgacg ccgcgatcga ggcgctggac ctgcagggca
      961 tcctgcaggt ggccagcttc catccggact atcagttcga cggcgtggcc gcggacgacg
     1021 ccagcaacta caccaaccgg gcgcccttcc ccaccctgca cctgctgcgc gaagacagcg
     1081 tggcgcgcgc ggtggatgtc tatccggacc cggacgtgat cgtcgagcgc aacatccaga
     1141 ccctggaccg catcggcgtg gacggctggc atcgccgcct gcgcggcgaa gacctgtcat
     1201 gagcacggtg ccaccgatcg cggcgtggcc ggtggcgccg ctgcagggca aggtggtgct
     1261 ggtcaccggc ggcgcaaacg gcatcggccg tggcatcgcc caggccgtgc tcggcgccgg
     1321 cggacgcgtg ctgatcggcg atctggacgt ggaagcgggc caggcctgcc tggacgaatg
     1381 gcagcggggt gacgatgccg cgttccagcg cctggacatc gccgacgaag ccagcgtgcg
     1441 ctacttcgtc gcggtggccc tgcagcggtt cggccgtatc gacggactgg tcaacaacgc
     1501 cggcatcgcc ggcccgcatg gcacattgct gcaggacatg gcgtgggagg aatggcagcg
     1561 ccgcctgtcg tcactgcacg gtgccttcct gtgcagcaag cacgcgctgc cggcactctc
     1621 ggcccgcact gagggcgcga tcatcaacat cgcctccacc cgcgcctggc agtccgaagc
     1681 gcacagcgag gcctatgcgg cggccaaggg cgggctggtc gccttcaccc acgcgttggc
     1741 gatcagcagc ggcccggcgg tgcgggtcaa cagcatcagc cccggctgga tcggcaccac
     1801 ggcctggcag gcgccctcgc ggcgccacca gcccgactac tcggccaccg atcacgccca
     1861 gcacccggtc ggccgtgttg gccgccccga ggacatcggc gcgctggcgg tgtacctgct
     1921 gtcgtcgctg tccggcttca ccaccggcca ggacttcatc gtcgacggcg gcatgagccg
     1981 gaagatgatc tacgccgaa
//
LOCUS       DAOKIP010000358         1988 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.366,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000358 DAOKIP010000000
VERSION     DAOKIP010000358.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 1988)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1988)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1988
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.366"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            3..554
                     /locus_tag="QEL58_003958"
     CDS             3..554
                     /locus_tag="QEL58_003958"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019300024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbE family thiol:disulfide interchange protein"
                     /protein_id="HDS1678384.1"
                     /translation="MFFFGLLGLMIYGVMKSGDPQRDVLPSALIDKPAPAFALPVLHD
                     PEMIVHSDDLRGAPYLLNVWGSWCAACREEHPVLTRFAESKRVRVIGYNWKDDPTDAL
                     HWLEQLGNPFMVVLSDVEGRTAIDWGVTAAPETFLVDGSGIVRWKYSGAMTQRVVDEK
                     LIPALEKIEKAQGSAGSTLHTAP"
     gene            559..1008
                     /locus_tag="QEL58_003959"
     CDS             559..1008
                     /locus_tag="QEL58_003959"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012511626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c-type biogenesis protein CcmH"
                     /protein_id="HDS1678385.1"
                     /translation="MRWLLTMLLLLLPLAVLAQQPLHDPQPLQFRDDAEERRFHDLAA
                     QLRCVQCQNQSLADSNAQIAQDLRREVLQLMQQGHDDAQIKQFLVTRYGEFVLYQPPL
                     QPGTWLLWGGPLLVLGAGALVVFGIVRRRGRTVAATPASQADEGEGW"
     gene            1002..>1988
                     /locus_tag="QEL58_003960"
     CDS             1002..>1988
                     /locus_tag="QEL58_003960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HDS1678386.1"
                     /translation="MVSHWLPVLAGLVAALMAALVLWPLRHRGRRGFAVGVLALGVAG
                     ACLYLLVGDPRAAQVQPAPSVATLRDGVQALQDALKRDPQRADGWALLGRSQAELGNA
                     VAAAEAFARAAALAPDDPGVLVEAAQARAQADPGKRFDDTAIGWLQQARTLAPDAERA
                     SWLLGIALRQRGRNAEAADVWSGLLPRLEPGAAQALQAQIAIAREAAGQAPDAPAVAP
                     PALLQVRVQLPALQGSEWPASTQVFVLARAVGGPPMPVAARKLPLADFPATVGLGDGD
                     SPMPTAPLSAHREVEVLARISRSGSANRSEDDLQSTPVKVSLPHEGVVELRFP"
BASE COUNT          290 a          662 c          734 g          302 t
ORIGIN      
        1 tgctgttctt cttcggcctg ctcgggctga tgatctacgg ggtgatgaaa tcgggcgatc
       61 cgcagcgcga cgtgctgccc tcggccctga tcgacaagcc ggcgccggcg tttgcgctgc
      121 cggtgctgca tgacccggaa atgatcgtgc acagcgacga cctgcgcggc gcgccctacc
      181 tgctgaacgt gtggggcagc tggtgcgcgg cctgccgcga ggaacacccg gtgctgaccc
      241 gcttcgccga gagcaagcgc gtgcgcgtga tcggctacaa ctggaaggac gatccgaccg
      301 acgcgctgca ctggctggaa cagctgggca atcccttcat ggtggtgctc agcgatgttg
      361 aaggccgcac cgcgatcgac tggggcgtga ccgccgcacc ggaaaccttc ctggtcgatg
      421 gcagcggcat cgtgcgctgg aagtacagcg gcgcgatgac ccagcgcgtg gtggacgaga
      481 aactgattcc ggcgctggag aagatcgaga aggcccaggg cagtgccggc agcacgctgc
      541 acacggcgcc ctgagccgat gcgctggctg ctgacgatgc tgcttttact gctgccgctg
      601 gccgtgctgg cccagcagcc gctgcacgat ccgcagcccc tgcagttccg cgatgacgcc
      661 gaggagcgtc gcttccatga cctggccgca cagctgcgct gcgtgcagtg ccagaaccag
      721 tcactggccg attccaacgc gcagatcgcg caggacctgc gccgcgaggt actgcagctg
      781 atgcagcagg gccacgacga cgcgcagatc aagcagttcc tggtgactcg ctatggtgag
      841 ttcgtgctgt accagccacc gctgcagccg ggtacctggc tgctgtgggg cggcccgctg
      901 ctggtgctgg gggccggtgc gctggtggtg ttcggcatcg tccggcggcg tggccgcacg
      961 gttgccgcca cgccggccag ccaggccgac gaaggagagg gatggtgagt cattggctgc
     1021 cggtgctggc cggtctggtt gccgcattga tggcggcgct ggtgttgtgg cccctgcgcc
     1081 accgcggccg cagaggtttc gccgtgggcg tgctggcact cggtgtggcc ggcgcctgcc
     1141 tgtacctgct ggtgggtgac ccgcgcgccg cgcaggtaca gccggcgccg tcggtcgcga
     1201 cgctgcgcga tggcgtacag gcgttgcagg atgcactcaa gcgcgacccg cagcgggccg
     1261 atggctgggc actgctgggc cgttcgcagg ccgagctggg caatgccgtc gccgccgcag
     1321 aggccttcgc acgtgctgcc gcactggctc cggacgaccc cggcgtgctg gtggaagccg
     1381 cacaggcacg tgcccaggcc gaccccggaa aacggttcga tgacaccgca atcggctggt
     1441 tgcagcaggc acgcacgctg gcccccgacg ccgagcgcgc cagctggctg ctgggcatcg
     1501 cgctgcgcca gcgcggccgg aatgccgagg ccgccgatgt ctggagcggc ctgctgccgc
     1561 ggctggagcc cggcgccgcg caggcgctgc aggcacagat cgccatcgca cgcgaggccg
     1621 caggccaggc gcccgatgca ccggcggtag cgccaccggc gttgctgcag gtgcgcgtgc
     1681 agctgcccgc gctacagggc tcggagtggc cggccagcac ccaggtgttc gtgctggcac
     1741 gcgccgtggg tgggccgccg atgccggtgg ccgcgcgcaa actcccgttg gcggacttcc
     1801 cggccacggt cgggctgggc gacggcgaca gcccgatgcc gaccgcgcca ctgtcggcgc
     1861 atcgcgaagt ggaagtgctg gcacgcattt cacgcagcgg cagtgccaac cgcagcgaag
     1921 acgacctgca gagcacaccg gtgaaggtga gcctgccgca tgagggcgtg gtggaactgc
     1981 ggtttccg
//
LOCUS       DAOKIP010000359         1987 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.367,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000359 DAOKIP010000000
VERSION     DAOKIP010000359.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 1987)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1987)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1987
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.367"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            118..>1987
                     /gene="prpE"
                     /locus_tag="QEL58_003961"
     CDS             118..>1987
                     /gene="prpE"
                     /locus_tag="QEL58_003961"
                     /EC_number="6.2.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005408227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="propionate--CoA ligase"
                     /protein_id="HDS1678387.1"
                     /translation="MNYEETYRRSIDEPEAFWGEEAKRIHWHKPPQQVLDYSNPPFRR
                     WFVGGETNLCYNAVDRHLAERADQLALVAISTETNSTREITYRQLYREVNDFAAVLRH
                     LGVGHGDRVVIYMPNMAEAVFAMLACARIGAVHSVVFGGFAAHNLALRIDDAKPKLLI
                     AADAGMRGGKLIPYKAMVDAACAEASAPPPHVLIVSRGLDAAEPRVPGRDVEYATLRA
                     QIGEVDVPVQWLEASEPSYLLYTSGTTGKPKGVQRDVGGYAVAMAQSMETVFDCKPGQ
                     VMFSTSDVGWAVGHSYNVYGPLIGGCTSLLYEGLPTNPDPGIWWALCEQYNVRTMFSS
                     PTAIRVLKKHDADFIHRHDLRALKYLFLAGEPLDEPTAHWISEALGKPIIDNYWQTET
                     GWPALTLLPGLEMKPVRFGSPGFPNLGYRMKVIDENTGEEVAPGQKGVLVMTPPLPPG
                     CMSTVWNDDGRFLQSYFSHFKELLYSSLDWAIRDDDGYTFILGRTDDVINVAGHRLGT
                     REIEEAISSHPRVAEAAVIGVKDELKGQVPLVFVTLKQGLDGEDPAPVVAEMMATVTT
                     SLGAVARPAHVHVVNALPKTRSGKLLRRSLQALAEQRDPGDLSTLDDPGALEEIRRA"
BASE COUNT          362 a          627 c          667 g          331 t
ORIGIN      
        1 caggtgcagg gctgcaagcc ctgcaggaca aaacccaccc cctaccaagg tagggcggcc
       61 cgcgcggcag cgccggacta tcctcgaacc catgactttg tctgggaggg ctgcgtcatg
      121 aactacgagg aaacctaccg tcgctcgatc gacgagccgg aggccttctg gggcgaagaa
      181 gccaagcgca tccattggca caaaccgccg cagcaggtgc tcgattacag caacccgccg
      241 ttccggcgct ggttcgtcgg cggcgaaacc aatctctgct acaacgccgt cgatcggcac
      301 ctggccgagc gcgccgacca gcttgcgctg gtggccattt cgaccgaaac caacagcacc
      361 cgcgagatca cctatcgcca gctgtatcgc gaggtgaatg acttcgctgc cgtactcagg
      421 cacctcggcg tcggtcatgg tgaccgcgtg gtgatctaca tgccgaacat ggccgaagcc
      481 gtgttcgcga tgctcgcctg cgcgcgcatc ggtgcggtgc actcggtggt gttcggcggc
      541 tttgcagcgc ataacctggc gctgcgcatc gacgatgcga aaccgaaact gctgattgcc
      601 gccgatgccg gcatgcgcgg cggcaagctg attccgtaca aggcgatggt cgatgctgcc
      661 tgtgcagagg cgagtgcacc gccaccgcac gtgctgatcg tttcgcgcgg gctggacgcg
      721 gccgagccgc gggtgccggg ccgtgatgtg gagtacgcca cactgcgcgc gcagatcggc
      781 gaagtcgatg tgccggtgca gtggctggaa gcaagcgaac cgagctacct gctgtatacc
      841 tccggtacca ccggcaagcc gaaaggcgta cagcgcgatg tcggcggcta cgcggtggcg
      901 atggcgcagt cgatggagac ggtgttcgac tgcaagccgg gccaggtgat gttctccacc
      961 tccgatgtcg gttgggcggt aggccattcc tacaacgtgt acggcccgct gatcggcggc
     1021 tgcacctcgc tgttgtacga aggattgccg accaacccgg acccgggcat ctggtgggcg
     1081 ctgtgcgagc agtacaacgt gcgcacgatg ttctcctcgc ccaccgccat ccgcgtactt
     1141 aaaaaacacg atgcagactt catccatcgc cacgatctgc gcgcactgaa gtacctgttc
     1201 ctggccggtg agccgctgga cgagccgact gcgcactgga tcagcgaggc actgggcaag
     1261 ccgatcatcg acaactactg gcagaccgaa accggctggc cggcgttgac cctgctgccg
     1321 gggctggaga tgaagccggt gcgcttcggc tcgccgggct tccccaatct cggctaccgc
     1381 atgaaggtga tcgacgagaa caccggcgag gaagtggcac ctgggcagaa aggcgtgctg
     1441 gtgatgaccc cgccattgcc gccaggctgc atgagcacgg tgtggaacga cgacggtcgc
     1501 ttcctgcaga gctacttcag ccacttcaag gagctgctgt acagctcgct ggactgggcg
     1561 atccgcgatg acgatggtta caccttcatc ctcgggcgca ccgacgatgt gatcaacgtg
     1621 gccgggcatc gcttgggcac gcgcgagatc gaggaggcca tttccagtca tccgcgcgtg
     1681 gccgaggcgg ccgtgatcgg ggtcaaggat gaactgaagg ggcaggtacc gctggtgttc
     1741 gttaccctca agcaggggct cgatggcgag gatccggcgc cggtcgtggc cgagatgatg
     1801 gcgacggtga ccacttcgct gggcgcggtg gcgcggccag cgcacgtgca cgtggtcaac
     1861 gcattgccca agacccgctc cggcaagctg ctgcggcgct cgttgcaggc gctggccgag
     1921 cagcgcgacc cgggtgacct gtcgacgctg gacgaccccg gcgcgctgga ggagatccgc
     1981 cgggcgc
//
LOCUS       DAOKIP010000360         1984 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.368,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000360 DAOKIP010000000
VERSION     DAOKIP010000360.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 1984)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1984)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1984
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.368"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            100..>1984
                     /gene="htpG"
                     /locus_tag="QEL58_003962"
     CDS             100..>1984
                     /gene="htpG"
                     /locus_tag="QEL58_003962"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019338563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone HtpG"
                     /protein_id="HDS1678388.1"
                     /translation="MTETTQTETLGFQTEVKQLLQLMIHSLYSNKEIFLRELVSNAAD
                     AADKLRFEALTQPALLEGDSELRVRVSFDPAAHTITIEDNGIGMSRAEAIAHLGTIAK
                     SGTGDFLRQLSGDQKKDSQLIGQFGVGFYSAFIVADEVEVTSRRAGLAAGEGVRWSSR
                     GEGDFDVATVDKAERGTRIVLHLKDGEHDFADGWRLRSILKKYSDHIGLPIQMPKEGG
                     EEGAAVEWETVNRASALWTRPRTEISDAEYTEFYKHVAHDHSDPLAWSHNKVEGKLEY
                     TSLLYVPGRAPFDLYHRDAPKGLKLYVQRVFVMDQAEQFLPLYLRFIKGVVDSNDLSL
                     NVSREILQSGPVIDSMKAALTKRSLDMLEKLAADKPEQYATFWKEFGQVLKEGPAEDY
                     NNREKVAGLLRFASTRGDGDAQSVSLADYLGRMAEGQDKIYYLTGESYSQVRNSPHLE
                     VFRKKGVEVLLLTDRIDEWLMGYLTDFDGKGFVDIARGDLDLGALETEADKQEQEAAA
                     KDKQGLVERLKTVLGDDVAEVRVSHRLTDSPAVLAIGEQDLGLQMRQILEASGQKVPD
                     SKPVLEINPGHPLIAKLDAEADGTRFDDLGRVLFDQAALAAGDSLKDPGAYVARLNKL
                     LLEL"
BASE COUNT          394 a          663 c          637 g          290 t
ORIGIN      
        1 gcagccctgc cgaggaaccc cttgatttcg ggacaatcaa ccatacccct tggcgaggcc
       61 gcacgcgctg gcgcggcatt gcacatggag ccctaatcga tgaccgagac cacccagacc
      121 gaaacccttg gcttccagac cgaagtcaag cagctgctgc agctgatgat ccactcgctg
      181 tattccaaca aggaaatctt cctccgcgag ctggtctcca acgccgccga cgccgccgac
      241 aagctgcgct tcgaggccct gacccagccg gccctgctgg aaggcgacag cgaactgcgc
      301 gtgcgcgtca gcttcgaccc cgccgcccac accatcacca tcgaagacaa cggcatcggc
      361 atgagccgcg ccgaagccat cgcccacctc ggcaccatcg ccaagtccgg caccggtgac
      421 ttcctgcgcc agctgtccgg cgaccagaag aaggattcgc agctgatcgg ccagttcggc
      481 gtcggcttct acagcgcctt catcgttgcc gatgaagtgg aagtcacctc gcgccgcgcc
      541 ggcctggctg ccggcgaagg cgtgcgctgg agttcgcgcg gcgaaggcga tttcgacgtc
      601 gccaccgtcg acaaggccga gcgtggcacc cgcatcgtgc tgcacctgaa ggacggcgag
      661 catgacttcg ccgacggctg gcgcctgcgc agcatcctca agaagtattc ggaccacatc
      721 ggcctgccga tccagatgcc gaaggaaggt ggcgaagaag gtgcagcagt cgagtgggaa
      781 accgtcaacc gcgccagcgc gctgtggacc cgcccgcgca ccgagatcag cgacgccgag
      841 tacaccgagt tctacaagca cgtggcgcac gaccacagcg acccgctggc gtggagccac
      901 aacaaggttg agggcaagct ggagtacacc tcgctgctgt acgtgcccgg ccgcgcgccg
      961 ttcgacctgt accaccgcga tgcgcccaag ggcctgaagc tgtacgtgca gcgcgtgttc
     1021 gtgatggacc aggccgagca gttcctgccg ctgtacctgc gcttcatcaa gggcgttgtc
     1081 gattccaacg acctgtcgct gaacgtctcg cgtgagatcc tgcagtccgg cccggtcatc
     1141 gattcgatga aggccgcgct caccaagcgc tcgctggaca tgctggaaaa gctggccgcc
     1201 gacaagcccg agcagtacgc cacgttctgg aaggaattcg gccaggtact gaaggaaggc
     1261 ccggccgagg actacaacaa ccgcgagaag gtggccggcc tgctgcgctt cgcctccacc
     1321 cgtggcgacg gcgacgcgca gagcgtgtcg ctggccgact acctcggccg catggccgaa
     1381 ggccaggaca agatctacta cctgaccggc gagagctaca gccaggttcg caacagcccg
     1441 cacctggaag tgttccgcaa gaagggcgtg gaagtgctgc tgctgaccga ccgcatcgac
     1501 gagtggctga tgggctacct caccgatttc gacggcaagg gcttcgtcga catcgcccgt
     1561 ggcgacctcg acctgggcgc gctggaaacc gaagcggaca agcaggagca ggaagcggcg
     1621 gccaaggaca agcagggcct ggtggagcgc ctgaagacgg tgctgggcga cgatgtggcc
     1681 gaagtgcgcg tgtcgcatcg cctgaccgat tcgccggcgg tgctggccat cggcgaacag
     1741 gacctgggcc tgcagatgcg ccagatcctg gaagccagcg ggcagaaggt gccggacagc
     1801 aagccggtgc tggagatcaa cccgggccac ccgctgatcg ccaagctgga tgccgaagcc
     1861 gatggcacgc gcttcgacga cctgggccga gtgctgttcg accaggccgc actggccgcc
     1921 ggtgacagcc tgaaggaccc gggcgcctat gtcgcgcgcc tgaacaagct gctgctggaa
     1981 ctgt
//
LOCUS       DAOKIP010000361         1957 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.369,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000361 DAOKIP010000000
VERSION     DAOKIP010000361.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 1957)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1957)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1957
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.369"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            <1..>1957
                     /gene="infB"
                     /locus_tag="QEL58_003963"
     CDS             <1..>1957
                     /gene="infB"
                     /locus_tag="QEL58_003963"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017159225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-2"
                     /protein_id="HDS1678389.1"
                     /translation="APRNERGPGDRFAGQMHLSAADRARRGNSNNSNTRGRPGGRNQS
                     GGRRDMSRGGNNAGPHAFERPTAPVVREVAIGDTITVADLAQKLALKGGEVVKALFKM
                     GVMATITQSIDHDTAALVTEELGHKAIRANDNDAEDALLASTGENQGEATQRPPVVTI
                     MGHVDHGKTSLLDYIRRTKVATGEAGGITQHIGAYHVDTPKGVISFLDTPGHAAFTSM
                     RARGAKLTDIVVLVVAADDGVMPQTKEAIQHARSAGVPLIVAINKIDKSDADPMRVKN
                     ELLSEQVVAEDFGGDTQMVEISAKTGLGIDDLLDAISIQAELLELKAVDEGRASGVVI
                     ESSLDKGRGPVATVLVQQGRLKKGDYLVCGIQYGRVRALFDETGKQPEFAGPSIPVQV
                     LGLSGVPEAGDDFVVVEDERLAKDVAQQRETKRRESRLVATAGSRMEDIMATLGKGEG
                     QQVLNLVIKADVQGSVQALSQALVALSNEDIRINVIHSGVGGITESDANSAAASKATV
                     IGFNVRADASARRIIESNGVDLRYFSIIYDVIDQVKQVASGLLGVEIREEIIGIAEVR
                     DVFRSSKLGAVAGSMVIEGVVKRNKPIRVLRDSVVIFEGELESLRRFKENVEEVRNGT
                     ECGIAVKAYNDVKPGDQIECFERIEVPR"
BASE COUNT          368 a          633 c          657 g          299 t
ORIGIN      
        1 gcgccgcgca acgagcgtgg cccaggcgat cgcttcgccg gccagatgca tctgtcggcc
       61 gccgaccgcg cgcgtcgtgg caacagcaac aacagcaaca cccggggtcg tccgggcggc
      121 cgcaaccagt ccggtggccg tcgcgacatg tcgcgcggtg gcaacaatgc cggcccgcac
      181 gccttcgagc gtccgactgc accggtggtg cgtgaagtgg cgatcggcga cacgatcacc
      241 gtggccgacc tggcgcagaa gcttgcgttg aagggcggcg aagtggtcaa ggcgctgttc
      301 aagatgggcg tgatggccac catcacccag tccatcgacc acgacaccgc cgcactggtg
      361 accgaggaac tcggccacaa ggcgatccgt gccaacgaca acgacgccga agacgcactg
      421 ctggcctcga ccggtgaaaa ccagggcgaa gccacccagc gtccgccggt ggtcaccatc
      481 atgggccacg tcgaccacgg caagacctcg ctgctggatt acatccgccg caccaaggtc
      541 gccaccggcg aagccggcgg catcacccag cacatcggtg cctaccacgt ggatacgccg
      601 aagggcgtga tcagcttcct ggataccccg ggccatgctg ccttcacctc gatgcgtgcc
      661 cgtggcgcca agctgaccga catcgtggtg ctggtcgtgg ccgccgatga cggcgtcatg
      721 ccgcagacca aggaagcgat ccagcacgcc cgttcggcgg gtgtgccgct gatcgtggcg
      781 atcaacaaga tcgacaagtc cgacgccgac ccgatgcggg tcaagaacga actgctgtcc
      841 gagcaggtcg tggccgaaga cttcggtggt gacacccaga tggtggagat ctcggccaag
      901 accggcctgg gcatcgacga cctgctggac gccatctcga tccaggccga actgcttgaa
      961 ctgaaggccg tcgacgaagg ccgcgcctcg ggcgtggtga tcgaatcgtc gctggacaag
     1021 ggccgtggcc cggtcgctac cgtgctggtg cagcagggcc gcctgaagaa gggcgactac
     1081 ctggtgtgcg gcatccagta cggccgcgtg cgtgcgctgt tcgacgaaac cggcaagcag
     1141 ccggagttcg ccggcccgtc catcccggtg caggtcctgg gcctgtccgg cgtgccggaa
     1201 gccggtgacg acttcgtggt ggtcgaggac gagcgcctgg ccaaggacgt tgcccagcag
     1261 cgtgagacca agcgccgtga atcgcgcctg gtcgctaccg ccggcagccg catggaagac
     1321 atcatggcga ccctgggcaa gggcgagggc cagcaggtcc tcaacctggt catcaaggcc
     1381 gacgtgcagg gttcggtgca ggcgctgagc caggcactgg tcgcgctgtc caacgaagac
     1441 atccgcatca acgtgatcca ctccggcgtg ggcggcatca ccgagtcgga cgccaactcg
     1501 gccgccgctt cgaaggccac cgtcatcggc ttcaacgtgc gtgcggatgc ttcggcccgt
     1561 cgcatcatcg aatccaacgg cgtggacctg cgttacttct cgatcatcta tgacgtgatc
     1621 gatcaggtga agcaggtggc ttccggcctg ctgggcgtgg agatccgcga agagatcatc
     1681 ggtatcgccg aggtccgcga tgtcttccgc agctccaagc tgggcgccgt tgccggctcg
     1741 atggtcatcg agggcgtggt caagcgcaac aagccgatcc gcgtgctgcg cgacagcgtg
     1801 gtgatcttcg agggcgagct ggaatcgctg cgccgcttca aggagaacgt cgaggaagtc
     1861 cgcaacggta ccgaatgcgg tatcgcggtg aaggcctaca acgacgtcaa gccgggtgac
     1921 cagatcgagt gcttcgagcg tatcgaagtg ccgcgca
//
LOCUS       DAOKIP010000362         1927 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.370,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000362 DAOKIP010000000
VERSION     DAOKIP010000362.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 1927)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1927)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1927
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.370"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            38..454
                     /locus_tag="QEL58_003964"
     CDS             38..454
                     /locus_tag="QEL58_003964"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005419256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HDS1678390.1"
                     /translation="MDTPTAAFIVNLDVPDLAAAEAFYTAAFGLRIGRRLGPGAVELL
                     GGPTPLYLLHNEEGSAATEDGDVRDYERHWTPLHLDWVVDDIAAALARAVAAGATLEQ
                     PVRERHWGHIAVLADPFGHGFCLIQFSGEGYDALVD"
     gene            complement(467..1162)
                     /locus_tag="QEL58_003965"
     CDS             complement(467..1162)
                     /locus_tag="QEL58_003965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010480891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrolase"
                     /protein_id="HDS1678391.1"
                     /translation="MDTAVNARAWLDHHDLLDPAPMRLETGIQRREDGTLRVAVRTDL
                     HGCKGRMLDWWFTFFETTQHIRWWHPLDHVEHRGWDAAWQRGRSYHGASIHAVESLAD
                     IPPVAARLKFHDPRTLFARERLQTAQDAGDVSAVIAARIGFGDHVRLDVHGDPCDGQM
                     LHVARDTPFGCVLRSRFVLGLDSAEPQRDASDAVGLGLLRHCYTEFSFLSRLLPSLYY
                     GERANGEAVPLPW"
     gene            1247..1900
                     /locus_tag="QEL58_003966"
     CDS             1247..1900
                     /locus_tag="QEL58_003966"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HDS1678392.1"
                     /translation="MNSTTLPEPTTPTRRRGRPARPEAEVRHAVLQATLELLLAQGYE
                     ATTIEAVAAHAGVAKKTVYRHASNREELVGLAVREWTDGFAPQLQRDARNADEVLPLL
                     HAILQAVCAQALSAQAVQVFRLLATDFPGKDALLQAYLDNGIERGRVLLADWLARQQQ
                     RGLLRDADPACTARLILAMAVAEPLRERVIGVVAEDAPVDVHLRECVALLAPVLQGP"
BASE COUNT          321 a          649 c          661 g          296 t
ORIGIN      
        1 ggcgtacact gcctgcccgc atccactgag cctgcttatg gatacgccca ccgcagcgtt
       61 catcgtcaat ctcgacgtcc ccgatctggc cgcggctgaa gccttctaca ccgcagcctt
      121 cggcctgcgc atcggccgcc gccttggccc gggcgccgtg gaactgctcg gcgggccgac
      181 cccgctgtac ctgctgcaca acgaggaagg cagcgccgcc accgaggacg gcgacgtgcg
      241 cgactacgag cgccattgga cgccgctgca tctggactgg gtggtggatg acatcgcggc
      301 cgcgctggcg cgtgcggttg ctgctggagc aacgctggag cagccggtgc gcgagcgtca
      361 ctggggccac atcgcggtac tggccgatcc gttcggccac ggcttctgcc tgatccagtt
      421 cagtggcgaa ggctacgacg cgctggttga ctgaccggcg cgccggtcac cacggcaacg
      481 gcaccgcctc accgttggcg cgctcgccgt agtacagcga cggcagcagg cgcgagagga
      541 aactgaactc cgtgtagcag tgcctgagca ggcccagtcc gaccgcatcg ctggcatcgc
      601 gctgcggttc ggcgctgtcc aggcccagca cgaatcggct gcgcaggacg cagccgaacg
      661 gcgtatcgcg cgcgacgtgc agcatctgcc catcgcaggg gtcgccgtgc acatccaggc
      721 gcacgtgatc gccaaaaccg atgcgtgcgg cgatcaccgc cgacacatca ccagcatcct
      781 gcgccgtctg caggcgctcg cgcgcaaaca gcgtgcgcgg gtcatggaac ttcagccgcg
      841 ccgccactgg cggaatgtcg gccagcgatt ccaccgcatg gatgctggcg ccgtggtagc
      901 tgcggccacg ctgccaggcc gcgtcccagc cgcgatgctc gacgtgatcg agcggatgcc
      961 accagcggat gtgctgggtg gtctcgaaga aggtgaacca ccagtcgagc atgcggccct
     1021 tgcagccgtg cagatcggta cgaacggcca cccgcagagt gccgtcttcg cggcgctgga
     1081 tgccggtctc cagacgcatc ggcgccgggt cgagcagatc gtggtggtcc agccaggcgc
     1141 gagcgttcac agcggtatcc atcgacgttt cctgtgggtt ggagattcaa caatacggaa
     1201 acgatattcg tttcgcaatt aatcggatgc ggtaagatgg ggcgcaatga acagcaccac
     1261 cctgcccgag cccacaacgc cgacccgtcg ccgcggtcgc cccgcgcgac cggaagccga
     1321 agtccgccat gcggtactgc aggccaccct ggaactgctg ctggcacagg gttacgaagc
     1381 gaccaccatc gaagcggtgg cagcgcatgc cggggtagcg aagaagaccg tgtaccgcca
     1441 tgccagcaac cgcgaggaac tggtggggtt ggcggtgcgt gagtggaccg acggcttcgc
     1501 gccgcagctg cagcgtgatg cccgcaacgc cgacgaagtg ctgccgctgc tgcacgcgat
     1561 cctgcaggcg gtctgcgcac aagcgctgtc ggcgcaggca gtgcaggtgt tccgcctgct
     1621 cgccaccgac ttccccggca aggacgcgct gctgcaggcc tatctggaca acggcatcga
     1681 acgcggccgc gtgctgctgg ccgactggct ggcgcggcag cagcagcgcg ggctgctgcg
     1741 cgatgcagac cccgcgtgca cggcaaggct gatcctggcg atggccgtgg ctgagccact
     1801 tcgcgagcgc gtgatcggcg tggtggccga ggatgcgccg gtggacgtgc atctacgtga
     1861 gtgcgtggcg ttgctggcgc cggtgttgca ggggccatag cctggcgcca tccacggatg
     1921 ccctgcc
//
LOCUS       DAOKIP010000363         1925 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.371,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000363 DAOKIP010000000
VERSION     DAOKIP010000363.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 1925)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1925)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1925
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.371"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            14..1873
                     /gene="mnmG"
                     /locus_tag="QEL58_003967"
     CDS             14..1873
                     /gene="mnmG"
                     /locus_tag="QEL58_003967"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006400298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis enzyme MnmG"
                     /protein_id="HDS1678393.1"
                     /translation="MVIGGGHAGTEAALAAARTGVRTLLLTHNIETVGAMSCNPAIGG
                     IGKGHLVKEIDALGGAMAHAADRAGIQWRTLNASKGPAVRATRCQADRNLYRMAIRAI
                     VEGQANLTVFQAAVDDLVIEGDAVRGVITQTGLRFDAEAVVLTAGTFLAGKIHVGPTQ
                     YAAGRMGDPPATTLAARLRERPFQVDRLKTGTPPRIDGRSLDYSLMDEQPGDTPRPVM
                     SFLGSVDEHPQQVSCWITHTTEQTHQIIRDALHRSPLYSGQIEGIGPRYCPSIEDKVV
                     RFAEKASHQIFVEPEGLGIVEIYPNGISTSLPFDVQLEMVRSIRGFGNAHITRPGYAI
                     EYDFFDPRGLKASLETKLVNGLFFAGQINGTTGYEEAAAQGLLAGLNAARQVRGLDGW
                     CPRRDEAYLGVLVDDLITHGTNEPYRMFTSRAEYRLQLREDNADQRLTPVGREMGLVD
                     DRRWSAFETKQAAVAAERARLGALWATPANALGREVQDTLGVAVSRETNVLDLIKRPE
                     LDYAQLMQVPSLGPAVADGKVAEQVEIGVKYAGYLDRQREEIERQQRHEATPIAEAFD
                     YATVRGLSAEALQKLERVRPQTIGQAQRIPGMTPAAISLLLVHLERARRGRVA"
BASE COUNT          322 a          702 c          647 g          254 t
ORIGIN      
        1 tcgttacgac gtcatcgtca tcggcggtgg ccacgccggc accgaagccg cgctggccgc
       61 agcccgtacc ggcgtgcgca ccctgctgct gacccacaac atcgaaacgg tgggggcgat
      121 gagctgcaac ccggccatcg gcggcatcgg caagggccac ctggtcaagg agatcgacgc
      181 cctcggcggc gcgatggcgc atgccgccga ccgcgccggc atccagtggc gcacgctcaa
      241 cgcctccaag ggcccggccg tgcgcgccac ccgctgccag gccgaccgca acctgtaccg
      301 catggcgatc cgcgccatcg tcgaaggcca ggccaacctg accgtgttcc aggccgccgt
      361 cgatgacctg gtcatcgaag gcgacgccgt gcgcggggtc atcacccaga ccgggctgcg
      421 cttcgacgcc gaggccgtgg tgctgaccgc aggcaccttc ctggccggca agatccatgt
      481 cggcccgacc cagtacgccg ccggccgcat gggcgacccg ccggccacca cgctggcggc
      541 gcgcctgcgc gagcgcccgt tccaggtgga ccgcctgaag accggcacgc cgccgcgcat
      601 cgacggccgc tcgctggact acagcctgat ggacgagcag cccggcgaca cgccgcgccc
      661 ggtgatgtcc ttcctcggct cggtggacga gcatccgcag caggtcagct gctggatcac
      721 ccataccacc gaacagaccc accagatcat ccgcgacgcg ctgcaccgct cgccgctata
      781 cagcggccag atcgagggca tcggcccgcg ctactgcccc tccatcgagg acaaggtggt
      841 gcgctttgcc gaaaaggcca gccaccagat cttcgtcgaa cccgagggcc tgggcatcgt
      901 cgagatctac cccaacggca tctccacctc gctgccgttc gacgtgcagc tggagatggt
      961 gcgcagcatc cgtggcttcg gcaacgcgca catcacccgc cccggttacg cgatcgagta
     1021 cgacttcttc gatccgcgcg gcctgaaggc ctcgctggaa accaagctgg tgaacgggct
     1081 gttcttcgcc ggccagatca acggcaccac cggctatgaa gaagcggccg cgcagggcct
     1141 gctggccggc ctcaacgccg cacgccaggt gcgcggactg gacggctggt gcccgcgccg
     1201 cgacgaggcg tacctgggcg tgctggtgga tgacctgatc acccacggca ccaacgagcc
     1261 gtaccgcatg ttcaccagcc gcgccgagta ccgcctgcag ctgcgcgagg acaacgccga
     1321 ccagcgcctg accccggttg gccgcgaaat gggcctggtc gatgaccgcc gctggagcgc
     1381 gttcgagacc aagcaggccg cagttgccgc cgagcgcgcg cgactgggcg cgctgtgggc
     1441 gaccccggcc aatgcgctgg gccgcgaagt gcaggacacg cttggcgtgg cggtcagccg
     1501 cgaaaccaac gtgctggacc tgatcaagcg cccggagctg gactacgcgc agctgatgca
     1561 ggtgccgtcg ctgggcccgg ccgtggccga cggcaaggtg gccgagcagg tggagatcgg
     1621 cgtgaagtac gccggctacc tggaccgcca gcgcgaggag atcgagcgcc agcagcggca
     1681 tgaagccacg ccgattgccg aagccttcga ttacgccacg gtgcgtgggc tgtcagccga
     1741 agcgctgcag aagctggagc gcgtgcggcc gcagaccatc ggccaggcgc agcgcatccc
     1801 gggcatgacc ccagcggcga tctcgctgct gctggtgcac ctggaacgcg cccgccgcgg
     1861 ccgcgtggcg taggcaaaac cgtccgcctc tggtgggtgc cgaccttgct cggcacatgg
     1921 ctctg
//
LOCUS       DAOKIP010000364         1902 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.372,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000364 DAOKIP010000000
VERSION     DAOKIP010000364.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 1902)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1902)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1902
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.372"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            89..1894
                     /gene="recQ"
                     /locus_tag="QEL58_003968"
     CDS             89..1894
                     /gene="recQ"
                     /locus_tag="QEL58_003968"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase RecQ"
                     /protein_id="HDS1678394.1"
                     /translation="MASRPAHDLLQRVFGYDDFRGPQQDIVEHVAAGHDALVLMPTGG
                     GKSLCYQVPALLRDGCGIVISPLIALMQDQVEALRQLGVRAEYLNSTLDAETAGRVER
                     ELLAGELDMLYVAPERLLTGRFLSLLSRSHIALFAIDEAHCVSQWGHDFRPEYRQLTV
                     LHERWPDIPRIALTATADPPTQREIAERLDLAEARHFVSSFDRPNIRYTVVQKDNARK
                     QLTDFLRGHRSEAGIVYCMSRRKVEETAEFLCGQGFNALPYHAGLPPEVRANNQRRFL
                     REDGIVMCATIAFGMGIDKPDVRFVAHTDLPKSMEGYYQETGRAGRDGEAAEAWLCYG
                     LGDVVLLKQMIEQSEASEERKQLERSKLDHLLGYCESMQCRRQVLLAGFGETYPQPCG
                     NCDNCLTPPAAWDATVPAQKALSCVYRSGQRFGVGHLIDILRGSENEKVKQQGHDKLS
                     TYAIGRDLDARTWRSVFRQLVAASLLEVDSEGHGGLRLTDASRAVLTGRRQISMRRDA
                     ASTSSGRERSAQRTGLSVLPQDLALFNALRGLRAELAREQNVPAFVIFHDSTLRNIAE
                     QRPTSLDELARVGGIGGTKLSRYGPRLVEIVREEG"
BASE COUNT          312 a          687 c          616 g          287 t
ORIGIN      
        1 agccagctgt tgcctttgac gttgatctgg cctggagcag gtgcagggcg cagccctgcc
       61 gagccccccg ccggggtaaa ctacccggat ggcttcccgt cccgcgcacg acctgctcca
      121 acgcgtcttt ggttacgacg atttccgtgg tccgcagcag gacatcgtgg agcacgtggc
      181 tgccggtcac gatgccctgg tgctgatgcc caccggcggc ggcaagtcgc tgtgctacca
      241 ggtgccggcc ctgctgcgtg acggttgcgg catcgtcatc tcgccgctca tcgcgctgat
      301 gcaggaccag gtcgaggccc tgcgccagct gggcgtgcgc gccgagtacc tgaattcgac
      361 cctggacgcc gaaaccgccg gtcgcgtcga gcgcgaactg ctggccggcg agctggacat
      421 gctctatgtc gcgcccgagc gcctgctgac cggccgcttc ctgtcgctgc tgtcgcgcag
      481 ccacatcgcg ctgttcgcca tcgacgaagc gcactgcgtg tcgcagtggg gccacgattt
      541 ccgccccgaa taccgccagc tcaccgtcct gcacgagcgc tggccggaca ttccgcgcat
      601 cgcgctgacc gccaccgccg acccgcccac ccagcgcgag atcgccgagc gcctggacct
      661 ggccgaggcc cgccacttcg tcagctcgtt cgaccgcccc aacatccgct acaccgtggt
      721 gcagaaggac aacgcccgca agcagctgac cgatttcctg cgcggccatc gcagcgaggc
      781 cggcatcgtc tactgcatgt cacggcgcaa ggttgaagag accgccgaat tcctctgcgg
      841 ccagggcttc aatgcgctgc cctaccacgc cggcctgccg ccggaggtgc gtgccaacaa
      901 ccagcgccgc ttcctgcgcg aagacggcat cgtgatgtgc gccaccatcg ctttcggcat
      961 gggcatcgac aagccggacg tgcgcttcgt ggcgcatacc gacctgccca agtcgatgga
     1021 aggctattac caggaaaccg gccgcgccgg ccgcgatggc gaggccgccg aggcctggct
     1081 gtgctatggc ctgggcgacg tggtgctgct caagcagatg atcgagcagt ccgaggccag
     1141 cgaggagcgc aagcaactgg agcgctccaa gcttgaccac ctgctgggct actgtgaatc
     1201 catgcagtgc cgccgccagg tgctgctggc cggtttcggc gagacctacc cgcagccctg
     1261 cggcaactgc gacaactgcc tgaccccgcc ggccgcctgg gatgccaccg tccccgcgca
     1321 gaaggcgttg agctgcgtct accgcagcgg ccagcgcttt ggtgtcggcc acctgatcga
     1381 catcctgcgc ggcagcgaga acgagaaggt caagcagcag ggccacgaca agctgagcac
     1441 ctatgcgatc ggccgcgacc tggatgcgcg cacctggcgc agcgtgttcc gccagttggt
     1501 ggccgccagc ctgctggaag tggacagcga aggccacggc ggcctgcgcc tgaccgatgc
     1561 cagccgcgcc gtactgaccg gccgccgcca gatcagcatg cgccgcgatg ccgccagcac
     1621 cagcagcggc cgcgaacgca gcgcgcagcg caccggcctg tcggtgctgc cgcaggacct
     1681 tgccctgttc aacgccctgc gcggcctgcg cgccgaactg gcacgtgaac agaacgtgcc
     1741 ggccttcgtg atcttccacg acagcaccct gcgcaacatc gccgagcagc gcccgaccag
     1801 cctggatgaa ctggcccggg tcggcggcat cggcggcacc aagctcagcc gctacggccc
     1861 gcgcctggtg gagatcgtgc gcgaggaagg gtaatggcga tc
//
LOCUS       DAOKIP010000365         1893 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.373,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000365 DAOKIP010000000
VERSION     DAOKIP010000365.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 1893)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1893)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1893
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.373"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(5..253)
                     /locus_tag="QEL58_003969"
     CDS             complement(5..253)
                     /locus_tag="QEL58_003969"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012509930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3297 family protein"
                     /protein_id="HDS1678395.1"
                     /translation="MSDTPPDHLAINPASPFHDAQALERGVGVRFNDVERDNVEEYSV
                     SEGWIRVQAGKARDRRGNPMTIKVKGKVEAYFLETKPE"
     gene            344..886
                     /locus_tag="QEL58_003970"
     CDS             344..886
                     /locus_tag="QEL58_003970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006452585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1678396.1"
                     /translation="MPDNSDYFDFEEDIHDFDEEGFEARVWNLLMLINPGDEELALQQ
                     FNRWREQLAEDGQPLEADSDWLPALFTAIAWQSGFEVDRDDLESLQSAVNELSARFNL
                     QLDWGGDLDDEDFAEGLDGVQLMSTAFDRLREHNYTLWSVDAGSDGFSGVMALTRDDD
                     AMLALCSLLNVEIRLGSDPF"
     gene            complement(1060..1335)
                     /locus_tag="QEL58_003971"
     CDS             complement(1060..1335)
                     /locus_tag="QEL58_003971"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005407912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4031 domain-containing protein"
                     /protein_id="HDS1678397.1"
                     /translation="MTVYVDDAVHPWRGQRWAHLMADTLAELHAMAAQLGIPPRAFQN
                     KASGAHYDVTAELRAQAIALGARAISRHADRELVKAVIANARAQYRP"
     gene            complement(1349..1837)
                     /locus_tag="QEL58_003972"
     CDS             complement(1349..1837)
                     /locus_tag="QEL58_003972"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010484124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1678398.1"
                     /translation="MSQNSKAKRDKRKKQQGKRPFLRLNAQQQVQNHAVLTSEDGQVV
                     AAIGLQGREWLLAIGGQTMGNAENPVPMLAMLKHLANVQEKEGRKVSLEYSELLQKLL
                     DTLAEESGQTADEYLDKLVAEFEGVEAAEGEEEAAAEGEVAEEAAAEATPAADSDSKP
                     QA"
BASE COUNT          284 a          624 c          645 g          340 t
ORIGIN      
        1 ccggttactc cggcttcgtt tccaggaaat acgcctcgac cttgcccttg accttgatgg
       61 tcatcgggtt gccgcggcgg tcgcgggcct tgccggcctg cacgcggatc cagccttcgc
      121 tgaccgagta ttcctcgacg ttgtcgcgct cgacgtcgtt gaaacgcacg cccacgccgc
      181 gctccagcgc ctgcgcatca tggaaggggc tggccggatt gatcgccagg tggtcgggag
      241 gggtatcgct catcgcttca ttcacagtga cggccaccaa ggccggcttc agcggcacag
      301 gataaaccgt agaatgccgg cctgccccag aggaagttcc gccatgcccg acaacagcga
      361 ctatttcgac ttcgaggaag acatccacga cttcgacgag gagggcttcg aggcgcgggt
      421 ctggaacctg ctgatgctga tcaacccggg cgatgaggag ctggcgctgc agcagttcaa
      481 ccgctggcgc gagcagctgg ccgaggacgg ccaaccgctg gaagcggaca gcgactggct
      541 gccggcactg ttcacggcca tcgcctggca gtccggtttc gaggtggatc gcgacgacct
      601 ggaatcgctg cagtcggcag tgaacgagct gtcggcgcgc ttcaacctgc agctggactg
      661 gggcggcgac ctcgacgacg aggacttcgc cgaaggcctg gacggcgtgc agctgatgtc
      721 caccgccttc gaccgcctgc gcgagcacaa ctacacgctg tggagcgtgg atgccggcag
      781 cgacggcttc agcggcgtga tggcgctgac ccgcgacgat gacgcgatgc tggcgctgtg
      841 ctcgctgctg aacgtggaaa tccgcctggg cagcgacccg ttctgagcgg ggaaggtggg
      901 tgcggagccc gcctatgggg ggatgccaac cttggtcggc atgccctgtg cctgatgtgc
      961 ggaccaaggt ccgcacccac cacaggaggt ggtacccgca ccctgcacag caagtggtag
     1021 ccccacactg cacagcaagc ggtagccacc aacggctgcc tatggccggt actgcgcccg
     1081 ggcgttggcg atcaccgcct tgaccagctc gcggtcggcg tgccgggaaa tggcccgtgc
     1141 accgagcgcg atcgcctgcg cgcgcagctc tgctgtgaca tcgtagtggg cgccgctggc
     1201 cttgttctgg aaggcccgcg gcggaatgcc gagctgcgcc gccatcgcgt gcagctcggc
     1261 cagggtgtcg gccatcaggt gcgcccagcg ctgaccgcgc cagggatgca ccgcgtcatc
     1321 gacgtagacc gtcaccgccg cggccggttc aggcctgcgg cttgctgtcg ctgtcagcgg
     1381 ccggggtcgc ttcggcggcg gcttcttcgg ccacctcgcc ctcggcggct gcctcttcct
     1441 cgccctcggc ggcttcgacg ccttcgaact cggcaaccag cttgtccagg tactcgtcag
     1501 cggtctggcc ggactcttcg gccagggtgt ccagcagctt ctgcagcagc tcggagtatt
     1561 ccaggctgac cttgcggcct tccttctcct gcacgttggc caggtgcttg agcatggcca
     1621 gcatcggcac cgggttctcg gcgttgccca tggtctggcc gccgatggcc agcagccact
     1681 cgcggccctg caggccgatg gcggcgacca cctggccgtc ttcgctggtc agcacggcgt
     1741 ggttctgcac ctgctgctgg gcgttcagac ggaggaacgg gcgcttgccc tgctgcttct
     1801 tgcgcttgtc gcgcttggcc ttggagttct gggacatgag gtggggtcac ctggagacgg
     1861 aaagaccgcc attgtagcgg gtgcgccggg tga
//
LOCUS       DAOKIP010000366         1828 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.374,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000366 DAOKIP010000000
VERSION     DAOKIP010000366.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 1828)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1828)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1828
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.374"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            58..393
                     /locus_tag="QEL58_003973"
     CDS             58..393
                     /locus_tag="QEL58_003973"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014036120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1678399.1"
                     /translation="MYHPTLNQTLRCAGLLLPMVLLTACGGHKKVAKAETPAETPVVE
                     VKTPELDGRGSYRFLMSDGDRKMTADEFDAWMKANGIRVAKGNGQDAAAKPVVVASKD
                     QPKDKKKKK"
     gene            complement(478..1686)
                     /gene="kbl"
                     /locus_tag="QEL58_003974"
     CDS             complement(478..1686)
                     /gene="kbl"
                     /locus_tag="QEL58_003974"
                     /EC_number="2.3.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005408238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine C-acetyltransferase"
                     /protein_id="HDS1678400.1"
                     /translation="MTDASSALTRHYAEELDAIRAQGLFKSERIITSPQSAEITLDDG
                     RKVLNFCANNYLGLADHPDLIQAAKDALDTHGFGMASVRFICGTQDLHKQLEKQIADF
                     FGKQDTILYAACFDANGGLFEPLLGENDAIISDALNHASIIDGVRLCKAKRFRYANCD
                     MADLEAQLQAADAAGCKTKLITTDGVFSMDGFIAPLDEITALAKKYNALVHIDECHAT
                     GFLGATGRGSAEVKGVLEKIDIITGTLGKAMGGALGGFTCASAEVIELLRQRSRPYLF
                     SNSLPPHVVAAGIKAFEMLAAADDLRGTLAENTAYFREKMTAAGFDVKPGVHPISPVM
                     LYDAPLAQKFAERLLEEGIYAIGFFFPVVPKGQARIRTQISAAHSREHLDRAIDAFTR
                     IGVELGVIKG"
BASE COUNT          322 a          556 c          637 g          313 t
ORIGIN      
        1 caccgttcca ggcgtagggg gcgcctggtt gttgaatttc ccgaacggag cctgcccatg
       61 taccacccga ccctcaacca aaccctgcgc tgcgcaggcc tgctgctgcc gatggtgctg
      121 ctgaccgcct gtggtggcca caagaaggtg gccaaggcgg aaacgccggc cgagaccccg
      181 gtggtggaag tgaagacccc ggagctggat ggccgcggca gctaccgctt cctgatgagc
      241 gacggcgaca ggaagatgac cgccgacgag ttcgatgcct ggatgaaggc caacggcatt
      301 cgcgttgcca agggcaatgg ccaggacgcc gccgccaagc cggtggtggt ggccagcaag
      361 gatcagccca aggacaagaa gaaaaagaag tgacgcctat ggctgccgac cctggtcggc
      421 acgctctgat tgggtcggaa ccctttccgc aggaaaggga tccgaccccg gccatgatca
      481 gcccttgatc acgcccagct cgacgccgat gcgggtgaag gcatcgatcg cgcggtccag
      541 gtgctcgcgg ctgtgtgccg cactgatctg ggtgcggatg cgggcctggc ccttgggcac
      601 caccgggaag aagaagccga tcgcatagat gccttcttcg agcaggcgct cggcgaactt
      661 ctgcgccagc ggcgcgtcgt acagcatcac cgggctgatc ggatgcacgc ccggcttcac
      721 gtcgaaaccg gcggcggtca tcttctcgcg gaagtaggcg gtgttctcgg ccagcgtgcc
      781 gcgcaggtcg tcagcggcgg ccagcatctc gaacgccttg atgccggcgg cgaccacgtg
      841 cggtggcagc gaattggaga acaggtaggg gcgcgagcgc tggcgcagca gttcgatcac
      901 ctcggcgctg gcgcaggtga agccgcccag tgcgccgccc atggccttgc ccagggtgcc
      961 ggtgatgatg tcgatcttct ccagcacgcc ctttacttcg gccgagccgc ggccggtggc
     1021 gccgaggaag ccggtggcgt ggcattcgtc gatgtgtacc agcgcgttgt acttcttcgc
     1081 cagcgcggtg atctcgtcca gcggcgcgat gaagccgtcc atcgagaaca cgccatcggt
     1141 ggtgatcagc ttggtcttgc agccggcggc atcggcggcc tgcagctggg cttccaggtc
     1201 ggccatgtca cagttggcgt aacggaagcg cttggccttg cacaggcgca cgccgtcgat
     1261 gatcgaagca tggttcagcg cgtcggagat gatcgcgtcg ttctcgccca gcagcggttc
     1321 gaacaggcca ccgttggcgt cgaagcaggc ggcatagagg atcgtgtcct gcttgccgaa
     1381 gaagtcggcg atctgcttct ccagctgctt gtgcagatcc tgggtgccac agatgaagcg
     1441 caccgaggcc atgccgaagc cgtgggtatc caatgcgtcc ttggcggcct ggatcaggtc
     1501 cggatggtcg gccaggccca ggtagttgtt ggcacagaag ttcagcacct tgcggccgtc
     1561 gtcgagggtg atctcggccg actgcgggct ggtgatgatc cgctcggact tgaacaggcc
     1621 ctgggcgcgg atggcgtcca gttcctcggc gtagtggcgg gtcagggcgg aggaggcgtc
     1681 ggtcatggcg tgggcacggc tcagcacggg gaaaccgctg attctaccgg gcaacgatgg
     1741 ccatcgaccg ggccgggcgg ggcaccgcca tggccggcac atgttgcatc gcaatagcaa
     1801 acgggttaaa aattcgtgaa ccacgcct
//
LOCUS       DAOKIP010000367         1781 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.375,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000367 DAOKIP010000000
VERSION     DAOKIP010000367.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 1781)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1781)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1781
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.375"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            263..1777
                     /locus_tag="QEL58_003975"
     CDS             263..1777
                     /locus_tag="QEL58_003975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019662193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA hydrolase/transferase family protein"
                     /protein_id="HDS1678401.1"
                     /translation="MSVDRIANARLRDRVVSAEAAAALIQPGETVAMSGFTGSGYPKA
                     VPVELARRIEAVHAQGNPFQIKLMTGASTAPELDGALAKADGIAMRMPFQSDPDARNR
                     INEGKLDYIDIHLSHVAQHVWFGFYGEIDTAVIEVSAIREDGSLVPSTSVGNNKTWLD
                     LAKKVIVEVNEWQPAGVDGMHDIYYGTALPPHRKPIPLVNANDRIGDTALRCDPDKIV
                     AVVRTNGPDRNSPFSPIDATSEQIAAHLIEFLKHEVKKGRLPPNLLPLQSGVGNIPNA
                     VLAGLAKSGFRDLAAFTEVIQDGMLDLLRDGVLSYASCTGFALSPQANETFKEHIDFY
                     RERIIMRTQEISNHPELVRRLGCIGMNGMIEVDIYGNVNSTHVMGTRIMNGIGGSGDF
                     ARNGFLSAFLSPSTAKNGTISAIVPMASHVDHTEHDVSVIVTEQGLADLRGLTPRKRA
                     QVLIDNCAHPDFRAQLQDYFDRASRESYGKHTPHLLPEALSWHQRWLDTGTMKG"
BASE COUNT          347 a          604 c          551 g          279 t
ORIGIN      
        1 atgaatgtcg cgtattcata atgggcggca ggcaataaaa aagcccgctt gcagcgaact
       61 gccagcgggc tctgctccct cccccacgtc gggatgcagg gccatcgtgc gggctgcgaa
      121 agcactttgc acgctgcact gcaaaacaaa accggccggt tcgggtgacc ccggtaggga
      181 aaagccattc cacgaaggta gaaccccccg tacggcgggg gatggccgat aatcgggttt
      241 ccccccgaga aacactgtcg tcatgtctgt tgatcgcatc gccaacgcgc gtcttcgtga
      301 ccgcgtggtc tccgccgagg ccgcagccgc gctgatccag cccggtgaaa ccgtggccat
      361 gagcggcttt accggctccg ggtatcccaa ggccgttccc gtcgaactgg cgcgccgcat
      421 cgaagcggtg catgcccagg gcaatccctt ccagatcaag ctgatgaccg gcgcctccac
      481 cgcgccggaa ctcgatggcg cgctggccaa ggccgatggc atcgccatgc gcatgccgtt
      541 ccagagcgac ccggatgcgc gcaaccgcat caacgaggga aagctggatt acatcgacat
      601 ccacctcagc cacgtcgccc agcacgtgtg gttcggcttc tacggcgaga tcgataccgc
      661 cgtgatcgaa gtgtcggcca tccgcgagga cggctcgctg gtgccctcca cctcggtcgg
      721 caacaacaag acctggctgg acctggccaa gaaggtgatc gtcgaggtca acgaatggca
      781 gccggccggc gtcgacggca tgcatgacat ctactacggc accgcgctgc cgccgcaccg
      841 caagccgatt ccgctggtga acgccaacga ccgcatcggt gacaccgcgc tgcgctgcga
      901 cccggacaag atcgtggcgg tggtgcgcac caacggcccg gaccgcaaca gcccgttcag
      961 cccgatcgat gcgaccagcg agcagatcgc cgcgcacctg atcgagttcc tcaagcacga
     1021 agtgaagaag ggccgcctgc cgccgaacct gctgccgctg cagtcgggcg tgggcaacat
     1081 ccccaacgcg gtgctggccg gcctggccaa gagtggtttc cgcgacctgg ccgcgttcac
     1141 cgaggtgatc caggacggca tgctcgacct gctgcgcgat ggcgtgctga gctacgcctc
     1201 gtgcaccggc tttgcgttga gcccgcaggc caacgagacg ttcaaggagc acatcgattt
     1261 ctaccgcgag cgcatcatca tgcgcacgca ggaaatctcc aaccatccgg aactggtgcg
     1321 ccgcctcggc tgcatcggca tgaacggcat gatcgaggtg gacatctacg gcaacgtcaa
     1381 ttcgacgcac gtgatgggca cgcggatcat gaacggcatc ggcggttcgg gtgactttgc
     1441 ccgcaacggc ttcctgtccg cgttcctgag cccgtccacc gccaagaacg gcaccatttc
     1501 ggcgatcgtg ccgatggcca gccacgtcga ccacaccgag cacgacgtgt cggtgatcgt
     1561 caccgaacag ggcctggccg acctgcgtgg gctgaccccg cgcaagcgtg cgcaggtact
     1621 gatcgacaac tgcgcgcatc cggatttccg cgcgcagctg caggactact tcgaccgtgc
     1681 cagccgcgag agctacggca agcacacccc gcacctgctg ccggaagcgc tgtcgtggca
     1741 ccagcgctgg ctggataccg gcacgatgaa gggctgaggc c
//
LOCUS       DAOKIP010000368         1764 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.376,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000368 DAOKIP010000000
VERSION     DAOKIP010000368.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 1764)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1764)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1764
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.376"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(9..1064)
                     /locus_tag="QEL58_003976"
     CDS             complement(9..1064)
                     /locus_tag="QEL58_003976"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="suppressor of fused domain protein"
                     /protein_id="HDS1678402.1"
                     /translation="MQDDHDDTDTPGWDAINAALAPLYAGQEPRHYGTALPYTLGGQD
                     PLDGISVYWADAPVPHWHYITYGFSELYAKESSDADASGYGFELTFRLAAVDGESAVS
                     MPPAWPMNLLQNLARYVFGSGNVFEDGHHLNANGPIALETGTRLCHLAFIADPQLPAR
                     DTTNGHLQFLQLVGLTDEEMEAVKRWSTRGVLQALQPAMPLWISDLQRGNLLDDPALA
                     AQVQAGSEREGSSTGMLFIETLDWRQEAGITTLVLGAGQVASVCELLPLRLRHGKSLE
                     LVSRERQWEFIAAGGGEASEVSADSARWALDAAGLQALASVRAERGIYPLAGALRIEV
                     VPTYLRDAKGEVIRQIG"
     gene            complement(1112..1615)
                     /locus_tag="QEL58_003977"
     CDS             complement(1112..1615)
                     /locus_tag="QEL58_003977"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1678403.1"
                     /translation="MALLHAKTAAGRQEIEDRGRRLPAALRSILLMVDGHRDDSELRG
                     LFEGLRAPSDALEQLVAQGLIEAIGGSAEATPTRGISSGREQDPALYQQLYDAMSEAV
                     RRHLGLKGYFIQLKIERCTDALALERLCPELLAAVGKARSPALAQRWWQETQAALVNG
                     GNEVVQA"
BASE COUNT          289 a          629 c          540 g          306 t
ORIGIN      
        1 acgggatctc agccgatctg gcggatcacc tcgcccttgg cgtcgcgcag gtaggtcggc
       61 accacttcaa tgcgcagcgc gcctgccagc ggatagatcc cgcgttcggc acgcacgctc
      121 gccaacgcct gcaatccggc cgcatccagc gcccagcgcg cgctgtcggc agacacctcg
      181 ctggcttcac cgcccccggc cgcaatgaac tcccactgcc gttcgcggct gaccagttcc
      241 agcgatttgc catggcgcag gcgcagcggc agcaattcgc acacgctggc gacctggccg
      301 gcgcccagca ccagggtggt gatgccggcc tcctgtcgcc aatcaagcgt ttcgatgaac
      361 agcatgccgg tgctggagcc ctcgcgctcg ctgccggcct gcacctgcgc ggccagcgcc
      421 ggatcgtcca gcagattgcc gcgctgcagg tcactgatcc acagcggcat cgccggctgc
      481 agcgcctgca gcacgccgcg cgtggaccag cgcttgaccg cctccatctc ttcatcggtc
      541 aagccgacca gctgcaggaa ctgcaggtgg ccgttggtgg tatcacgtgc cggcaactgt
      601 ggatcggcaa tgaaggccag atgacacagc cgggtgccgg tctccagcgc gatcggaccg
      661 ttggcgttga ggtggtgacc atcctcgaat acgttgccgc tgccgaacac atagcgcgcc
      721 aggttctgca gcaggttcat cggccacgcc ggcggcatgc tgactgcgct ctcaccgtct
      781 acggccgcca ggcggaaggt gagctcgaaa ccgtagccac tggcgtcggc atcgctgctc
      841 tccttggcgt acaactcgga aaagccatag gtgatgtagt gccagtgcgg caccggcgca
      901 tccgcccagt acacactgat gccatccagc ggatcctgcc cacccagcgt gtacggcagc
      961 gcagtgccgt aatgacgcgg ttcctggcct gcatacaacg gcgccagcgc ggcgttgatc
     1021 gcgtcccagc caggggtgtc ggtgtcatcg tggtcgtcct gcacgcggga ctccttgtgg
     1081 ggtaagtgaa ccgatcactt tacgcggtgg ctcaggcctg cacgacctca ttgccaccat
     1141 tcaccaacgc cgcctgggtt tcctgccacc agcgctgtgc cagcgccggg ctgcgcgcct
     1201 tgcccaccgc agccagcagt tccgggcaca ggcgttccag cgccagcgca tcggtgcagc
     1261 gttcgatctt caactggatg aagtaaccct tcaggcccag atgccgacgc actgcttcac
     1321 tcattgcgtc gtacagctgc tggtacaacg ccgggtcctg ctcgcgcccg ctgctgatgc
     1381 cgcgcgtcgg tgttgcctcg gcactgccac cgatggcttc gatcaggccc tgcgcgacca
     1441 gctgttccag tgcatccgat ggtgcgcgca ggccttcgaa caggccacgc agttcgctgt
     1501 catcgcgatg gccatcgacc atcaacagta tcgaacgcag tgccgccggc aggcgccggc
     1561 cgcggtcttc gatttcctga cggccagcgg ccgtcttggc gtgcagcaat gccatgcatc
     1621 cccccaatcc tcgatgcgca atgccagcgc gcccgtgccg ggcacgcccc ctggttgcca
     1681 ccgtcgaagc ctgcgcagct tccccgaagc gcaggctctg ttgcagaccg atgacagggc
     1741 gagcttagcg caagtcctgg cagg
//
LOCUS       DAOKIP010000369         1700 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.377,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000369 DAOKIP010000000
VERSION     DAOKIP010000369.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 1700)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1700)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1700
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.377"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(14..337)
                     /locus_tag="QEL58_003978"
     CDS             complement(14..337)
                     /locus_tag="QEL58_003978"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux SMR transporter"
                     /protein_id="HDS1678404.1"
                     /translation="MNTLALFFVICSALIDVAANMMVAKSEGFRRWRWGVAAIVMVWI
                     AFALLGQAVRYMDLATAYAMWGAIGVIGTATCGRLLFGNRLRPIGWVGIALVTFAVLL
                     LSTAK"
     gene            complement(337..690)
                     /locus_tag="QEL58_003979"
     CDS             complement(337..690)
                     /locus_tag="QEL58_003979"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010485170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="QacE family quaternary ammonium compound efflux
                     SMR transporter"
                     /protein_id="HDS1678405.1"
                     /translation="MSRTVPARGALVAWACLTVAIVAEVVGTSFMAHAARDGGWTGYL
                     VMAGALALSYYFLALSVRRIAVGVAYAVWEGLGLTLLTVVGVTVFGESLSLQQLAGLV
                     LAVVGIVCVTLGEAH"
     gene            851..>1700
                     /locus_tag="QEL58_003980"
     CDS             851..>1700
                     /locus_tag="QEL58_003980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDS1678406.1"
                     /translation="MPYSPESLQAFVEAAALGSFSAAARRLRKTQSTVSTAIAHLEAD
                     LGVSLFDRSGRYPQLTEAGRQVLGHAQEILAADVRLQQLSVRLAAPVEARLTVVFSDV
                     YQLDPELRVLQRFAEAFPEIELEWLDAEGEDVLEVVCSGRAGLGLLPRQERYPDELVA
                     RPLAHHSELSIYVARDHPLADAGRRAAAQLARYRQVRLSAEVEHARAATGLAWTATDY
                     LMVMEMTEDGIGWAELPRALVQRYDRGQLVELTLPGWPRRIHSDLLWRRDTPPGPAAL
                     WWVDALG"
BASE COUNT          325 a          580 c          565 g          230 t
ORIGIN      
        1 gcacagcggc gcattacttc gcggtactga gcagcagcac cgcgaacgtg accagcgcga
       61 tgccgaccca accgatcgga cgcaggcggt tgccgaacag caggcggccg caggtagcgg
      121 taccgatcac accgatcgca ccccacatcg cataggcggt ggccaggtcc atgtagcgca
      181 ccgcctggcc cagcagggcg aaggcgatcc agaccatgac gatcgccgca acaccccagc
      241 gccagcggcg gaagccttcc gacttggcca ccatcatgtt ggcggcgacg tcgatcaagg
      301 ccgaacagat cacgaagaac agggccaggg tgttcatcag tgcgcctccc cgagggtgac
      361 gcagacgatg ccgaccaccg ccagcaccag gccggccagc tgctgcagcg acaggctctc
      421 gccgaacacg gtgacgccga ccacggtcag cagggtcagg ccgaggcctt cccacaccgc
      481 ataggccacg ccgaccgcga tgcgacgcac cgagagcgcc aggaagtaat aggacagcgc
      541 cagcgcgcca gccatgacca ggtaaccggt ccagccgcca tcacgggcgg catgggccat
      601 gaacgaggta ccgaccactt cggcgacgat cgccacggtc aggcaggccc aagcgaccag
      661 cgcgccacgg gcgggaacag tgcgggacat gtgaaactcc ttgcagggcg gggaccgcgc
      721 cccgccatca gtagatccac gccatgcgtg gatgatccgg aacgccccac agacaggggc
      781 gacgaccggc agtatcatcg tcttttacgg tgggatcaaa atggattcca tcgacaagag
      841 cgatggatca atgccctact ctcctgaatc cctgcaggcc ttcgtcgaag ccgcagcgct
      901 cggctcgttc tcggcggcag cgcgccggct gcgcaagacc cagtcgacgg tcagcaccgc
      961 catcgcccac ctcgaagccg acctgggcgt gagcctgttc gaccgcagtg ggcgctaccc
     1021 acagctgacc gaagccggcc gacaggtgct cgggcatgcc caggagatcc tcgccgccga
     1081 tgtgcgcctt cagcagttga gcgtgcgcct ggccgcaccg gtcgaagcgc gcctgaccgt
     1141 ggtgttctcc gatgtctacc agcttgatcc ggagctgcgg gtcctgcaac ggtttgcgga
     1201 ggcgttcccg gaaatcgagc tggaatggct ggatgccgaa ggtgaggacg tgctggaagt
     1261 tgtatgcagc ggcagggccg gcctgggcct gctgcccagg caggaacgct atcccgatga
     1321 actggtggcc cgaccgctgg cccaccacag cgaactatcg atctatgtgg cgcgcgacca
     1381 tccgctggcc gacgccggcc gccgcgcggc agcccagctg gcccggtacc ggcaggtgcg
     1441 attgagcgcc gaggtcgaac atgcacgtgc agccaccggg ctggcgtgga ccgccaccga
     1501 ctacctgatg gtgatggaga tgaccgagga cggcatcggc tgggccgaac tgccacgcgc
     1561 gctggtacag cgctatgacc gtgggcagct ggtggaactg accctgcccg gctggccacg
     1621 gcgtatccac agcgacctgc tgtggcgccg cgacacgccg ccgggtccgg ccgccctgtg
     1681 gtgggtcgac gcgttggggt
//
LOCUS       DAOKIP010000370         1697 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.378,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000370 DAOKIP010000000
VERSION     DAOKIP010000370.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 1697)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1697)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1697
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.378"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            128..1123
                     /locus_tag="QEL58_003981"
     CDS             128..1123
                     /locus_tag="QEL58_003981"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014036726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HDS1678407.1"
                     /translation="MIPLSILDLAPVCEGSDTTAAFANMLELAQHADALGYRRYWLAE
                     HHNMPGIASAATAVLIGHVAGGTKRIRVGAGGIMLPNHAPLQVAEQFGTLASLYPDRI
                     DLGLGRAPGTDQPTARALRRYFDSADQFPQDVRELLHYFEPVQPGQAVQAVPGGGLRV
                     PTWILGSSLFGARMAASMGLPYAFASHFAPDVMDEALAVYRREFRPSATLKQPHAMLA
                     LNVVASDSEAESRRLFTSQQQSFVNLRRGRPGKIPAPIDDIETFWEPHEKLGVERALA
                     CTVLGDPQQVAEGIAAFVERHTPDELMLTANLYDHRARLRSFELAMHAWHARHAG"
     gene            1192..1689
                     /locus_tag="QEL58_003982"
     CDS             1192..1689
                     /locus_tag="QEL58_003982"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014036727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HDS1678408.1"
                     /translation="MADTRAEHIAQLAELIRDVEVAMFTTTGVDGRLYSRPLATQQVA
                     FGGDLWFVITADSPKVAEIALDPRVNVAYASPSKNTYVSVSGRARVVDDRAKIEELWS
                     PAMKLFFPGGKEDPNLRLIHVRADSAEYWDGPGTLLGKALTFVLSAVQDEPAALADNG
                     FIDLR"
BASE COUNT          269 a          602 c          553 g          273 t
ORIGIN      
        1 gtggcgcccc gggccatgtc cggcgggctc tgaacccatt ccgcaggaat cagcatcccg
       61 ccaccgtcac tggccgccgc gcctggccga ccccatgcat gggaaatcct gtgacggaaa
      121 accgctgatg atcccgttgt cgattctcga cctggccccg gtctgcgagg gcagtgacac
      181 caccgccgcc ttcgccaaca tgctggaact ggcccagcac gccgatgcgc tgggctaccg
      241 ccgctactgg ctggccgaac accacaacat gcccggcatc gccagcgcgg ccacggccgt
      301 gctgatcggc cacgtcgccg gtggcaccaa gcgcatccgc gtcggtgccg gcggcatcat
      361 gctgcccaac cacgcgccgc tgcaggtggc cgaacagttc ggcacgctgg cctcgctgta
      421 tcccgaccgc atcgacctag gcctgggtcg ggcgcccggc accgaccagc ccaccgcacg
      481 cgccctgcgc cgctacttcg acagtgccga ccagttcccg caggacgtgc gcgagctgct
      541 gcactacttc gagccggtgc aacccggcca ggccgtgcag gcggttcccg gcggcggcct
      601 gcgcgtaccg acctggatcc tgggttcgag cctgttcggt gcgcgcatgg ccgcttcgat
      661 gggcctgccg tacgcgttcg cctcgcattt cgccccggac gtgatggacg aagcgctggc
      721 ggtctatcgc cgcgagttcc gcccctcggc cacgctgaag cagccgcacg cgatgctggc
      781 gctgaacgtc gttgccagcg acagcgaagc cgagtcgcgc cgcctgttca ccagccagca
      841 gcagagtttc gtcaacctgc ggcgcggtcg cccgggcaag atcccggcac cgatcgacga
      901 catcgaaacc ttctgggaac cgcatgaaaa gctgggcgtg gagcgcgcat tggcctgcac
      961 cgtgctgggc gatccgcagc aggtggccga gggcatcgcc gcgtttgtcg agcgccacac
     1021 gcccgacgaa ctgatgctca ccgccaacct gtatgaccac cgcgcgcgcc tgcgttcgtt
     1081 cgaactggcg atgcacgcct ggcacgctcg ccacgcgggc tgaacacttg cgtcacgggc
     1141 tgttgcagcc acaccgcgtc tgatgggggc tcatcccaat ggagcccccc catggccgac
     1201 acccgcgccg aacacattgc ccagctggcc gaactgatca gggacgtgga ggtggcgatg
     1261 ttcaccacca ccggggtgga tggccgcctc tacagccggc cgctggccac ccagcaggtc
     1321 gcgttcggtg gtgacctgtg gttcgtcatc accgccgaca gcccgaaggt ggccgagatc
     1381 gcactcgatc cgcgggtgaa cgtggcctat gcctcgccct cgaagaacac gtatgtgtcg
     1441 gtgtccggtc gcgctcgcgt ggtggatgat cgcgcgaaga tcgaggaact gtggtcgcct
     1501 gcgatgaagc tgttcttccc tggcggcaag gaggatccca acctgcgcct gatccatgtg
     1561 cgggccgatt cggccgagta ctgggatggc ccgggtacgc tgctgggcaa ggcgctgacg
     1621 ttcgtgctgt cggcggtgca ggacgaaccg gcggcgttgg ccgacaacgg gttcatcgac
     1681 ctgcgctgat gaccgat
//
LOCUS       DAOKIP010000371         1690 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.379,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000371 DAOKIP010000000
VERSION     DAOKIP010000371.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 1690)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1690)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1690
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.379"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..1244)
                     /locus_tag="QEL58_003983"
     CDS             complement(<1..1244)
                     /locus_tag="QEL58_003983"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008573410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDS1678409.1"
                     /translation="MSEPATAEDTALGLLSRPGFARLLAYRIFAMLSYQVVAVTVGWH
                     IYEVTRNPFSLGLVGLAEVLPFFCVAPFAGYLVDHLPRRRLGMVACSGLIATALVLTS
                     VAKGWLPFEGVWPIYAAIALTGMVRAFLSPIYNALFARVLARDQFARGAGLGAVVFQA
                     GMVAGPALGGVLVGFGGKGLSYAVATVFALVAMGCLATLKVEEPVHTGPAAPIFRSIA
                     EGARFVVGNRIMVGAMALDMFSVLLGGVVAMLPAFLHEILHHGPEGLGILRAMPALGS
                     VCVGLWLARHPLHRNAGRVLLFAVAGFGLCVIGFGLSQHFWLSALILLFYGAFDGVSV
                     VIRSTILQLATPEEMRGRVSSINGIFISSSNELGAFYAGTMARLLGLVPAVVLGGFAV
                     LSVAGITAWKNPTLRKLNLRDL"
     gene            complement(1241..>1690)
                     /locus_tag="QEL58_003984"
     CDS             complement(1241..>1690)
                     /locus_tag="QEL58_003984"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SufE family protein"
                     /protein_id="HDS1678410.1"
                     /translation="TDSPFPLEPTAAEAQTAIAEEFGFFGDWSERYQYLIDLGRKLPA
                     FPEEWKTEEHRLLGCQSMVWIVPEGNAQSLRFHAISDSAIVSGLIFLALRVYSGRSAQ
                     EILDTEPSYIQDIGLARHLSPTRSNGVAAMLAFIRETAQAQLQRDPS"
BASE COUNT          322 a          591 c          568 g          209 t
ORIGIN      
        1 tgcaggtcgc gaagattcaa cttccgcagc gtcgggttct tccacgccgt gatcccggcc
       61 acgctcagca ccgcgaaccc acccagcacc accgccggca ccaggcccag cagccgggcc
      121 atcgtgccgg cgtagaacgc gcccagctcg ttggacgaac tgatgaagat gccgttgatc
      181 gacgacaccc gtccgcgcat ttcttccggc gtggccagct gcaggatggt cgagcggatc
      241 accaccgaca cgccgtcgaa cgccccgtag aacagcagga tcagcgccga cagccagaag
      301 tgctgcgaca gcccgaagcc gatcacgcac aggccgaaac cggccaccgc gaacagcagc
      361 acgcggccgg cattgcggtg cagtgggtga cgggccagcc acagccccac gcacaccgaa
      421 cccagcgccg gcatcgcgcg caggatgccc agcccttccg ggccgtggtg caggatctcg
      481 tgcaggaacg ccggcagcat cgccaccacg ccacccagca gcaccgagaa catgtccagc
      541 gccatcgcgc cgaccatgat ccggttgccc accacgaagc gcgcgccttc ggcgatgctc
      601 ctgaagatcg gcgcggccgg gccggtgtgc accggttctt ccaccttcaa cgtagccagg
      661 caccccatcg ccaccagcgc gaagacggtg gccaccgcat aggacaggcc cttgcccccg
      721 aagccgacca gcacgccgcc cagtgccgga ccggccacca tgccggcctg gaacaccacg
      781 gcaccgaggc cggcgccacg cgcgaactgg tcgcgggcca gcacgcgggc gaacaaggcg
      841 ttgtagatcg gtgacaggaa ggcgcgcacc atgccggtca gtgcgatggc cgcatagatc
      901 ggccacacgc cctcaaaggg cagccagccc ttggccacgc tggtcagcac cagcgcggtg
      961 gcgatcagcc cggagcaggc gaccatgccc agccggcgcc gcggcagatg gtcgaccagg
     1021 taaccggcga acggcgccac acagaagaac ggcagtacct cggccaggcc gaccaggccc
     1081 agcgagaacg gattgcgggt gacttcgtag atgtgccagc cgacggtgac cgcgaccacc
     1141 tggtaggaca gcatcgcgaa gatgcggtat gccagcagcc tggcgaaacc gggccgggac
     1201 agcagcccca gcgcggtgtc ttcggcggtg gcaggttcgc tcacgacgga tcgcgctgca
     1261 gctgggcctg cgcggtctca cggatgaagg ccagcatcgc cgccacgccg ttgctgcggg
     1321 tgggcgagag gtggcgggcc aggccgatgt cctggatgta gctcggttcg gtgtccagga
     1381 tctcctgcgc cgagcgcccg gaatacacgc gcagggccag gaagatcagg ccggagacga
     1441 tggccgagtc actgatggca tggaagcgca gcgactgggc gttgccttcc ggcacgatcc
     1501 agaccatcga ctggcagccg agcaggcggt gctcctcggt cttccattcc tccgggaagg
     1561 ccggcagctt gcggccgagg tcgatcaggt actggtagcg ctcggaccag tcgccgaaga
     1621 agccgaattc ctcggcgatg gcggtctggg cctcggcggc ggtgggttca agcgggaacg
     1681 gggagtcggt
//
LOCUS       DAOKIP010000372         1629 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.380,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000372 DAOKIP010000000
VERSION     DAOKIP010000372.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 1629)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1629)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1629
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.380"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            131..1552
                     /locus_tag="QEL58_003985"
     CDS             131..1552
                     /locus_tag="QEL58_003985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017162741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M28 family peptidase"
                     /protein_id="HDS1678411.1"
                     /translation="MRRRVLAIASSLALLAAPAFAAPRTTTLPPASLATAAQLRDQAL
                     ADDTGWKVVESLTTEIGPRIAGSEADARAVAWAEAKFKALGFDKVWKEPVTFPKWERR
                     SEHAAVTGRNPQPLQITALGGSPGGTVEAEVVRFADLAALQAAPAGSLKGKIAFVDYQ
                     MLPFRDGRDYGRGGAIRSKGPSEAIRKGAVGFLMRSAGTDSHRVPHTGITRFDEGLTP
                     VPSAALSVPDADQLARLLARGSTTVKVALDCGWDGTATSYNVIGEITGRSLPKEVVVI
                     GGHLDSWDLGTGAVDDGAGVGITMAAGHLIGQLKQAPKRTIRVIAFANEEQGLYGGKA
                     YAEAHAKDLALHQLAAESDFGAGRIYAFNTGSPNPEGSREATRQIAEVMKPLGIEYQA
                     DKGGPGPDVGPLAAKGGAWAWLAQDGSDYFHLHHTADDTLDKIDPKALAQNVAAYTVF
                     AYLAAEADGGFGSEAKATTPPNE"
BASE COUNT          277 a          560 c          563 g          229 t
ORIGIN      
        1 gctccggcgg ggctttcgct ttgccggacg tggcggaaaa cagcgttcgc gccagccatg
       61 acctcccgcc catgcacacg cctgaacgac tgttaagctc caaggcttag gtcccttccc
      121 ggagttgtcc atgcgtcgcc gtgtgcttgc catcgcatcc tccctcgccc tgctggccgc
      181 cccggccttc gcggcgccgc gcaccaccac cctgcccccg gcctcgctgg ccaccgccgc
      241 acagctgcgc gaccaggcac tggctgacga caccggctgg aaggtggtcg aatcgctcac
      301 caccgagatc ggtccgcgca tcgccggcag cgaagccgat gcccgggccg tggcctgggc
      361 cgaagccaag ttcaaggcac tcggtttcga caaggtatgg aaggaaccgg tgacgttccc
      421 gaagtgggaa cgccgcagcg aacatgccgc cgtgaccggc aggaacccgc agccgctgca
      481 gatcaccgcg ctgggcggca gcccgggcgg caccgttgaa gccgaagtgg tgcgctttgc
      541 cgatctggcc gcattgcagg ccgcaccggc cggctcgctg aagggcaaga tcgctttcgt
      601 cgattaccag atgctgccgt tccgcgatgg ccgcgactac ggccgtggcg gcgcgatccg
      661 cagcaagggc ccgtcggagg cgatccgcaa gggcgcggtc ggcttcctga tgcgctcggc
      721 gggtaccgac tcgcatcgcg tgccgcacac cggtatcacc cgcttcgatg aaggcctgac
      781 gccggtgccg tcggcagcac tgtcggtgcc cgatgccgat cagctggcgc gcctgctggc
      841 ccgtggcagc accacggtga aggtggcgct ggattgcggc tgggatggca cggccacctc
      901 gtacaacgtg atcggcgaga tcaccggccg cagcctgccg aaggaagtgg tggtgatcgg
      961 cggccatctg gattcgtggg acctgggcac cggcgcggtc gatgacggcg caggcgtggg
     1021 catcaccatg gcggccgggc acctgatcgg ccagctcaag caggcgccga agcggaccat
     1081 tcgcgtgatc gccttcgcca acgaggaaca gggcctgtac ggcggcaagg cctacgccga
     1141 agcgcacgcc aaggacctgg ccctgcatca gctggcagcc gagagcgact tcggtgccgg
     1201 ccgcatctat gccttcaaca ccggttcgcc gaacccggaa ggctcgcgcg aagcgacccg
     1261 gcagatcgcc gaagtgatga agccgctggg catcgagtac caggccgaca agggcggccc
     1321 ggggccggat gtcggcccgc tggcggccaa gggcggtgcg tgggcgtggc tggcgcagga
     1381 tggctcggat tacttccacc tgcaccacac cgccgacgac acgctggaca agatcgaccc
     1441 gaaggcactg gcacagaacg tggctgccta cacggtattc gcgtacctgg ccgcggaagc
     1501 cgacggtggt ttcggcagcg aggccaaggc gaccacgccg ccgaacgaat gatgcgctgg
     1561 cgccgggcca tgcccggcga gcgcagcggg aagagcggtg cgaaccaagg ttcgcaccca
     1621 ccgggcaat
//
LOCUS       DAOKIP010000373         1575 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.382,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000373 DAOKIP010000000
VERSION     DAOKIP010000373.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 1575)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1575)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1575
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.382"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..358)
                     /locus_tag="QEL58_003986"
     CDS             complement(<1..358)
                     /locus_tag="QEL58_003986"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012509946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TfoX/Sxy family protein"
                     /protein_id="HDS1678412.1"
                     /translation="MSAPKLRNIGPKSAAWLRQVGLRSREELVAIGAVGAFVKVKRAG
                     FKPSLNLLYSLEGALLDCHWQELSEAQREALVQDYEARIAAHPLKAAGPASGPVHEQR
                     FDADGDAEDSVAESADE"
     gene            complement(355..837)
                     /locus_tag="QEL58_003987"
     CDS             complement(355..837)
                     /locus_tag="QEL58_003987"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014645821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HDS1678413.1"
                     /translation="MFANASLTGSKPEQYAQLLEQARGLVYAESDRIANAANLSALVY
                     HALPDLNWVGFYLYDGKELVVGPFQGLPACVRIPLDKGVCGAAASQRVTQRVDDVDAF
                     PGHIACDSASRSELVVPLLRGDELIGVFDIDSPKVGRFDAEDQAGLEAIARVFVEALG
                     "
     gene            906..>1575
                     /gene="bioD"
                     /locus_tag="QEL58_003988"
     CDS             906..>1575
                     /gene="bioD"
                     /locus_tag="QEL58_003988"
                     /EC_number="6.3.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dethiobiotin synthase"
                     /protein_id="HDS1678414.1"
                     /translation="MPLPATLPPALFVTGTDTEIGKTAVSTALLHALRRRGLRAVGMK
                     PVASGSEDLGQGLRNDDALALQAASWPVPDYADLNPYALRQPLAPELAAAEDGVQVEL
                     APIVAAFARLRAQADIVVVEGVGGWLAPVSATLDQLDLVRALQLPVLLVVGMRLGCVN
                     HARLTAQSLQASGVECLGWVGNHIDPAMQRQDENIATLRQRLPMPCWGRLPHLPGANG
                     EALAA"
BASE COUNT          225 a          538 c          569 g          243 t
ORIGIN      
        1 cctcgtcggc gctctcggcg acgctgtctt cagcgtcacc gtcggcatcg aagcgctgct
       61 catgcaccgg gccggaggcc gggccggccg ccttcagcgg gtgcgcggcg atgcgtgctt
      121 cgtagtcctg caccagcgct tcgcgctgcg cctcgctcag ttcctgccag tggcagtcca
      181 gcaatgcgcc ttccagcgag tacagcaggt tcaggctggg cttgaagccc gcccgcttga
      241 ccttgacgaa ggcgccgacc gcaccgatcg cgaccagctc ctcgcggctg cgcaggccga
      301 cctggcgcag ccacgccgca ctcttggggc cgatgttgcg cagcttcggt gcgctcatcc
      361 cagggcctcg acgaacacgc gggcgatggc ttccagcccg gcctggtcct cggcatcgaa
      421 gcggccaacc ttggggctgt cgatgtcgaa cacgccgatc agctcatcac cgcgcagcaa
      481 cggcaccacc agttccgaac gcgaggccga gtcacaggcg atatggccgg ggaaggcatc
      541 gacgtcgtcc acgcgctggg tcacgcgctg gctggcggcc gcgccgcaca cgcccttgtc
      601 cagcgggatg cgcacgcagg ccggcaggcc ctggaacggg ccgaccacca gttccttgcc
      661 gtcgtacagg tagaagccga cccagttcag atcgggaagg gcgtggtaga ccagcgcgga
      721 gaggttggcc gcgttggcga tgcggtcgga ctcggcgtag accaggcctc gggcctgttc
      781 cagcagctgg gcgtattgtt ccggcttgct gccggtgagc gaggcattgg cgaacatgcc
      841 cgcagtctag caagcgtgcg gggccggcga taatgcacgc tctgttgccc tgctggagcc
      901 catcgatgcc attgcccgcc acgctgccac ctgccctgtt cgtgaccggc accgataccg
      961 agatcggcaa gaccgcggtc agcaccgcgc tgctgcacgc actgcgccgt cgtggcctgc
     1021 gcgcggtcgg catgaagccg gtggccagcg gcagcgagga tctggggcag ggcctgcgca
     1081 acgacgacgc gctggccctg caggcggcca gctggccggt accggactat gccgacctga
     1141 acccgtatgc gctgcggcag ccgctggcac cggagctggc cgctgccgaa gatggcgtgc
     1201 aggtggaact ggcgccgatc gtggccgcgt tcgcgcgcct gcgtgcgcag gccgatatcg
     1261 tggtggtgga gggcgttggc ggctggttgg cgccggtctc ggccacgctg gaccagctgg
     1321 acctggtgcg cgcgttgcag ctgccggtgc tgctggtggt gggcatgcgg ctgggctgcg
     1381 tcaaccacgc gcggctgacc gcgcagtcgc tgcaggccag cggcgtcgag tgcttgggct
     1441 gggtcggcaa tcacatcgac ccggcgatgc agcgccagga cgagaacatc gccacgctgc
     1501 ggcagcgcct gccgatgccg tgctgggggc ggctgccgca cctgccgggg gcaaatggcg
     1561 aagcgctggc cgcgc
//
LOCUS       DAOKIP010000374         1525 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.383,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000374 DAOKIP010000000
VERSION     DAOKIP010000374.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 1525)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1525)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1525
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.383"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(54..1421)
                     /gene="purB"
                     /locus_tag="QEL58_003989"
     CDS             complement(54..1421)
                     /gene="purB"
                     /locus_tag="QEL58_003989"
                     /EC_number="4.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017156796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HDS1678415.1"
                     /translation="MSDSALLALSPLDGRYAGKVDALRPIFSEYGLIKARIVVEVEWL
                     LALAAEPGIVELAPFSDAAVARLRALAANFSPAQAARVKEIERTTNHDVKAVEYFIKE
                     QLKDDAELAPALEFVHFACTSEDINNLSYGLMLEQARREVLLPTLDGIAATLRTLAHA
                     QAGQPMLSRTHGQTASPTTLGKELANVVARLERQRRQIAAVELTGKINGAVGNYNAHV
                     ASYPDVDWPAFAERFVTGLGLVFNPYTTQIEPHDNVAEIGDAARRANIILIDLARDIW
                     GYISLGYFKQRLKEGEVGSSTMPHKVNPIDFENAEGNFGIANALFEHFSAKLPISRWQ
                     RDLTDSTVLRALGTAFGHSQVALDSLAKGLGKLEVNPQRLDADLDAAWEVLAEAVQTV
                     MRRHGLPNPYEQLKALTRGQGITAESMRAFVQGLELPADAKQRLLEMTPGSYTGLAES
                     LAKKI"
BASE COUNT          219 a          499 c          542 g          265 t
ORIGIN      
        1 tgccgttgcc tgccgcaggc agcgcccgcg gccgccgccg caaaggaaac cccttagatc
       61 ttcttcgcca gcgactcagc caggccggtg tagctgcccg gagtcatctc cagcaggcgc
      121 tgcttcgcat ccgccggcag ctccagcccc tgcacgaacg cccgcatcga ctcggcggtg
      181 atgccctggc cacgggtcag cgccttcagc tgctcgtacg ggttcggcag gccgtggcga
      241 cgcatcaccg tctgcacggc ctcggcgagc acttcccagg ccgcgtccag atcggcgtcc
      301 aggcgctgcg ggttcacttc cagcttgccc aggcccttgg ccagcgaatc cagcgccacc
      361 tggctgtggc cgaacgcggt gcccagtgca cgcagcacgg tggagtcggt caggtcacgc
      421 tgccagcggc tgatcggcag cttcgcgctg aagtgctcga acagcgcgtt ggcgatgccg
      481 aagttgcctt cggcgttctc gaaatcgatc gggttgacct tgtgcggcat cgtcgacgag
      541 ccgacttcgc cttccttcag gcgctgcttg aagtagccca gcgagatgta gccccagatg
      601 tcgcgggcca ggtcgatcag gatgatgttg gcgcggcgcg ctgcatcgcc gatctcggcg
      661 acgttgtcgt gcggctcgat ctgcgtggtg tacgggttga acaccaggcc caggccggtc
      721 acgaagcgct cggcgaaggc cggccagtcc acgtccgggt agctggccac gtgcgcgttg
      781 tagttgccga ccgcgccgtt gatcttgccg gtcagttcga ctgcggcaat ctgcctgcgc
      841 tggcgttcca ggcgcgcaac cacgttggcc agctccttgc ccagcgtagt cggtgaggcg
      901 gtctggccat gggtgcgcga cagcatcggc tggccggcct gggcgtgggc cagggtgcgc
      961 agggtggcgg cgatgccgtc cagggtcggc agcagcactt cgcggcgggc ctgttccagc
     1021 atcaggccgt agctgaggtt gttgatgtct tcgctggtgc aggcgaaatg cacgaattcc
     1081 agcgccggag ccagctcggc gtcgtccttc agctgttcct tgatgaagta ctccaccgcc
     1141 ttgacgtcgt ggttggtggt gcgctcgatc tccttcacgc gcgcggcctg ggccgggctg
     1201 aagttggcgg ccagcgcgcg caggcgggcg acggcggcgt cggagaacgg ggccagttcg
     1261 acgatgcccg gctcggcggc cagggccagc agccattcca cctcgaccac gatgcgggcc
     1321 ttgatcaggc catattcgga gaagatcggg cgcagggcgt cgaccttgcc ggcgtaacgg
     1381 ccatcaagcg gggacagggc gagcagggcg gaatcggaca tgtcggcagg gcggggacga
     1441 gcggcggggg ccatattcta cgacgtgccg gcgtggtggt gccggccgcc ggccggcgat
     1501 cgcgcctggc ccacgattcc atgga
//
LOCUS       DAOKIP010000375         1514 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.384,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000375 DAOKIP010000000
VERSION     DAOKIP010000375.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 1514)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1514)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1514
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.384"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            52..1164
                     /locus_tag="QEL58_003990"
     CDS             52..1164
                     /locus_tag="QEL58_003990"
                     /EC_number="2.3.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017917743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine O-acetyltransferase"
                     /protein_id="HDS1678416.1"
                     /translation="MTEFIPPGTRFHALPSPFPFKRGGALHGARVAYETWGTLAADAS
                     NAILIVTGLSPDAHAAANDANPALGWWEAMVGPGKPIDTDRWFVVCVNSLGSCKGSTG
                     PASLNPATDEPYRLDFPELSIEDGARAAIEVVRALGIAQLACVVGNSMGGMTALAVLM
                     LHPGIARSHINISGSAQALPFSIAIRSLQREAIRLDPRWNGGHYDDAEYPESGMRMAR
                     KLGVITYRSALEWDGRFGRVRLDSDQADDDPFGLEFQVESYLEGHARRFVRFFDPNCY
                     LYLSRSMDWFDLAEYADGDVLAGLAKIRVEKALAIGANTDILFPVQQQQQVADGLRAG
                     GADARFVGLESPQGHDAFLVDFERFGPAVRGFLDAL"
     gene            1165..1509
                     /locus_tag="QEL58_003991"
     CDS             1165..1509
                     /locus_tag="QEL58_003991"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005413994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1294 domain-containing protein"
                     /protein_id="HDS1678417.1"
                     /translation="MAWRRNLGLAAFGALIALMVSGVLPQWLGGWCLLASVVSFGLYG
                     HDKRAAQRKQWRIPERTLQLLAFAGGWPGALLGQALFRHKHRKAAFQWVFWLCVLANV
                     ASVAVMLREFSR"
BASE COUNT          216 a          502 c          524 g          272 t
ORIGIN      
        1 tggaaaccag cgtgtcgcca gctccacatg cggccccgct agaatgcctg catgaccgaa
       61 ttcatcccgc ccggcacccg cttccacgcc ctgccctcgc cgttcccgtt caagcgcggt
      121 ggcgcactgc atggcgcacg cgtggcctac gaaacctggg gaacgctggc cgccgatgcc
      181 agcaacgcga tcctgatcgt gaccggcctg tcaccggacg cgcatgcggc ggccaacgac
      241 gccaacccgg cattgggctg gtgggaggcg atggtcgggc ccggcaagcc gatcgatacc
      301 gatcgctggt tcgtggtgtg cgtgaactcg ctgggcagct gcaagggctc gaccggtccg
      361 gcctcgctca accccgctac cgatgaaccc taccgcctcg atttcccaga gctgtcgatc
      421 gaggacggcg cgcgcgctgc catcgaggtg gtgcgcgcgc tgggcatcgc gcagctggcc
      481 tgcgtggtcg gcaactcgat gggcggcatg accgcactgg cggtgctgat gctgcacccg
      541 ggcatcgcgc gcagccatat caacatttcc ggcagcgcgc aggcattgcc gttctcgatc
      601 gcgatccgct cgctgcagcg cgaggcgatc cgcctcgacc cgcgctggaa cggcggccac
      661 tacgacgatg ccgagtatcc cgagtcgggc atgcgcatgg cgcgcaagct gggcgtcatc
      721 acctatcgct cggcactgga atgggatggt cgcttcggcc gcgtacggct ggattcggac
      781 caggccgacg atgatccgtt cggccttgaa ttccaggtgg aaagttacct ggagggccac
      841 gcgcggcgct tcgtgcgctt cttcgatccg aactgctacc tgtacctgag ccgttcgatg
      901 gactggttcg atctggccga gtacgccgat ggcgatgtgc tggccggcct ggcgaagatc
      961 cgggtggaaa aggcgctggc gatcggcgcc aacaccgaca tcctgttccc ggtgcagcag
     1021 cagcaacagg tcgccgacgg cctgcgtgcc ggcggtgccg atgcgcgctt cgtcggcctg
     1081 gagtcgccgc agggccacga tgcgttcctt gttgatttcg agcgtttcgg cccggccgtg
     1141 cgcggcttcc tcgacgcgct gtaagtggcg tggcggcgca atctcgggct cgccgccttc
     1201 ggtgcgctga tcgcgctgat ggtcagcggc gtgctgccac agtggctggg cggctggtgc
     1261 ctgctggcca gcgtggtgtc gttcgggctg tatggccatg acaagcgtgc ggcgcagcga
     1321 aagcaatggc gcattcccga gcgcaccctg cagctgctgg ccttcgccgg gggctggcca
     1381 ggcgcgctgc tgggccaggc cctgttccgt cacaagcacc gcaaggcggc gttccagtgg
     1441 gtgttctggc tgtgcgtgct ggccaacgtg gcctcggtcg cggtgatgct gcgcgaattc
     1501 tcgcggtagc gctc
//
LOCUS       DAOKIP010000376         1507 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.385,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000376 DAOKIP010000000
VERSION     DAOKIP010000376.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 1507)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1507)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1507
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.385"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(4..>1507)
                     /locus_tag="QEL58_003992"
     CDS             complement(4..>1507)
                     /locus_tag="QEL58_003992"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014038247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1678418.1"
                     /translation="IAMALVGIFQFPADVVFGRMFPGTAFGVLVGNLLYTLMARRLAA
                     RTGRDDVTAMPLGLDAPTSIGMALLVLGPAFIAFKQQGLDPHAAGIATWQLGMAALVI
                     MGVLKFVLSFFGEAVTRALPRAALLGSIAGIALVLMGLLPLLETLRSPLVGFTTLGLL
                     LYVLIAKGKLPVRGPGVLLAFVFGTVLYYGLGLAGLGAPGFHVPAWVPPQVVLPLPTL
                     GFLEGLPTAMTYLPLLLPFGLLMVVGGINVSESARAAGDDYRTRDILLVEAVATLVAG
                     VCGGVAQTTPYIGQPAYKHMGARSGYTLLTGLFVGIGGMLGIISGLVQWLPLAVLAPI
                     IVYVAIDITTQAFQATPRHHTGAMVFGFLPSVAYLLAIKAPGWIAPDQLPQLLTKLDG
                     HGLPELAVIFTLGNGFIITSMLWISAVAAMVDGRLRRACGFLLVAALLTLFGLIHSVD
                     PRGGIYLPWDLDGLARIISWQFAGAYVALALLLGLLSLQKQAVKPLDGVS"
BASE COUNT          289 a          532 c          512 g          174 t
ORIGIN      
        1 gggtcagctg accccgtcca gcggcttcac cgcctgcttc tgcaacgaca acagccccag
       61 caacagcgcc agcgccacat aggcgcccgc gaactgccag ctgatgatgc gcgccagccc
      121 gtccaggtcc cacggcaggt agatgccacc gcgcgggtcc accgagtgga tcaggccgaa
      181 cagggtcaac agcgccgcca ccagcaggaa accgcaggcg cggcgcaggc gaccatcgac
      241 catcgccgcc actgccgaga tccacagcat cgaggtgatg atgaagccgt tgccgagggt
      301 gaagatcacc gccagttccg gcaagccatg accgtccagc ttggtcagca actgcggcag
      361 ctggtccggc gcgatccagc ccggcgcctt gatcgccagc aggtacgcca ccgacggcag
      421 gaagccgaac accatcgcac cggtgtggtg gcgtggcgtg gcctggaacg cctgggtggt
      481 gatgtcgatc gccacgtaca cgatgatcgg tgccagcacc gccagcggca gccactgcac
      541 cagcccggag atgatgccga gcatgccgcc gatgccgacg aacaggccgg tcagcagcgt
      601 atagccgctg cgcgcgccca tgtgcttgta ggccggctgg ccgatgtacg gcgtggtctg
      661 cgcgacgccg ccgcagacac cggccaccag cgtggccacc gcttccacca gcaggatgtc
      721 gcgggtgcgg tagtcatcac cggccgcgcg tgcgctttcg gacacgttga tgccgccgac
      781 caccatcagc agtccgaacg gcagcagcag cggcaggtag gtcatcgcgg tgggcaggcc
      841 ctcgaggaaa cccagcgtcg gcagcggcag caccacctgc ggcggcaccc acgccggcac
      901 atggaagccc ggcgcgccca gcccggccag gcccaggccg taatacagca cggtgccgaa
      961 cacgaaggcc agcagcacgc ccgggccacg caccggcagc ttgcccttgg caatcagcac
     1021 gtacagcagc aggcccagcg tggtgaagcc gaccagcggc gagcgcagcg tttccagcag
     1081 cggtagcagg cccatcagca ccagcgcgat gccggctatg gatcccagca gcgcagcacg
     1141 tggcagtgcg cgggtgaccg cttcgccgaa gaacgacagc acgaacttca gcacgcccat
     1201 gatgaccagc gcggccatgc ccagctgcca ggtggcgatg ccggcggcat gcgggtccag
     1261 gccctgctgc ttgaaggcga tgaaggccgg gccgagcacc agcagggcca tgccgatgct
     1321 ggtcggcgcg tccaggccca gcggcatggc ggtgacatcg tcgcggccgg tgcgcgcggc
     1381 cagccggcgc gccatcaggg tgtacagcag gttgccgacc agcacgccga aggcggtgcc
     1441 ggggaacatg cggccgaaca ccacgtcggc ggggaactgg aagatcccga ccagggccat
     1501 ggcgatg
//
LOCUS       DAOKIP010000377         1506 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.386,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000377 DAOKIP010000000
VERSION     DAOKIP010000377.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 1506)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1506)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1506
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.386"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            19..1500
                     /gene="glpD"
                     /locus_tag="QEL58_003993"
     CDS             19..1500
                     /gene="glpD"
                     /locus_tag="QEL58_003993"
                     /EC_number="1.1.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006394799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate dehydrogenase"
                     /protein_id="HDS1678419.1"
                     /translation="MEEVDLLVIGGGINGAGIARDAAGRGLRVLLCEQHDLAAHTSSA
                     SSKLIHGGLRYLEQGELGLVRKALGEREVVRRQAPYLVHPLRFVLPWEPHLRPRWMLR
                     VGLWLYDHLGRRSPAFPASQALDLQQDSLGAWLSPVLRRAFSYADAQVDDARLVLLNA
                     LDAAQRGAQVQVRSRCIELRALQGRWQAVLETHDGQQRHVIARAVANAAGPWAGGLLE
                     RMQARSGGPALRLVQGSHIVLRRPWPDDSACLLQQPDGRVVFLLPFAHDHLLVGTTDT
                     DYRGDPARCSVLPSEVAYLCDAANRYLREPITAADVAWQFAGVRPLLADPDPRAAKLS
                     RDYRLQVQSDPAPALHVLGGKLTTYRVLAEEALDLLRPALPQMGPAWTATGAALPGSD
                     WGDAAQARSQLSTRAPWLPADIAQRWAEAYGSRSASLLGAAQSMDDLGEHFGAGLHAR
                     EVDFLREHEWAHDADDVLWRRSKLGLRLDAAQMARLQAWMDRR"
BASE COUNT          215 a          511 c          554 g          226 t
ORIGIN      
        1 acaggacacg gaggcgcgat ggaggaggtt gacctgctgg tgatcggtgg cggcatcaac
       61 ggtgccggca tcgcccgtga cgcggccggt cgcggcctgc gggtgctgct gtgtgaacag
      121 catgacctgg ccgcgcacac ctccagtgcc agcagcaaac tgatccacgg cggcctgcgt
      181 tacctggaac agggtgaact gggcctggtg cgcaaggcac tgggcgagcg cgaggtggtg
      241 cgccggcagg caccgtacct ggtccatccg ttgcgcttcg tgctgccctg ggaaccgcac
      301 ctgcgcccgc gctggatgct gcgcgtgggg ctctggctgt acgaccacct gggccggcgc
      361 agccctgcct tccccgcgtc gcaagcgctg gacctgcagc aggattcgct cggcgcctgg
      421 ctctccccgg tgctgcggcg ggccttcagc tatgccgatg cacaggtcga tgatgcgcgg
      481 ctggtactgc tgaacgcact ggatgccgcg cagcggggcg cgcaggtgca ggtgcgcagc
      541 cgctgcatcg agctgcgtgc gctgcagggc cgttggcagg ccgtgctgga aacccacgat
      601 ggtcagcaac ggcacgtgat cgcacgcgcg gtggccaatg ccgcgggccc gtgggcgggc
      661 ggcctgctgg aacggatgca ggcgcgcagc ggcggccccg cactgcgcct ggtgcagggc
      721 agccacatcg tgctgcgccg cccctggccc gatgacagcg cctgcctgct gcagcaaccc
      781 gatggccggg tggtgttcct gctgcccttc gcccacgacc acctgctggt cggcaccacc
      841 gacaccgatt accgtggcga tccggcgcgc tgcagcgtgc tgccgtccga ggtggcctac
      901 ctgtgcgatg ccgccaaccg ctacctgcgt gaaccgatca ccgccgcaga cgtggcctgg
      961 cagtttgccg gtgtgcgccc gctgctggcc gacccggacc cgcgtgcggc gaagctgagc
     1021 cgcgactacc gcctgcaggt acagtccgat ccggcgccgg cactgcatgt gctcggcggc
     1081 aaactgacca cctaccgggt actggccgaa gaggcactgg acctgctgcg ccctgccctg
     1141 ccgcagatgg ggcccgcctg gaccgcaacc ggagccgcac tgccgggcag cgactggggg
     1201 gacgccgcac aggcccgctc gcagctgagc acgcgggctc cctggttgcc cgcggacatc
     1261 gcgcaacgct gggccgaggc ctacggcagc cgcagcgcgt cgttgctggg cgcggcgcaa
     1321 tccatggacg atcttggcga gcacttcggt gcgggcctgc atgcgcgcga agtggatttc
     1381 ctgcgggagc atgagtgggc gcacgacgcc gatgatgtgc tgtggcgacg gagcaagctg
     1441 gggttgcggc tggatgccgc gcagatggca cggctgcagg cctggatgga tagacggtag
     1501 agtcga
//
LOCUS       DAOKIP010000378         1505 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.387,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000378 DAOKIP010000000
VERSION     DAOKIP010000378.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 1505)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1505)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1505
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.387"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..439)
                     /locus_tag="QEL58_003994"
     CDS             complement(<1..439)
                     /locus_tag="QEL58_003994"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005413599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HDS1678420.1"
                     /translation="MSSAALIRLDEVQFGYGLRLVLDIPQLWIEQGSSVLLRGISGGG
                     KSTLLGLLAGVLLPGKGRVEVAGQALQAMRGARRDRFRADHLGVIFQQFNLLPFLSVR
                     DNVALGLRFSRLRSERISGPLDAEIARLLGALQLDPALMQRRAG"
     gene            complement(436..969)
                     /locus_tag="QEL58_003995"
     CDS             complement(436..969)
                     /locus_tag="QEL58_003995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005416721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2796 domain-containing protein"
                     /protein_id="HDS1678421.1"
                     /translation="MKLPAAFFLLLAASAAQAHDVRQLGAHVHGQATVDLALDQGVLE
                     LALQAPGIGILDFERPPANAAERASLARATAVLKSGSWVTLPTAAHCRLARSDASAEG
                     FDATAAAPAAGQHRHAGFSANLQYRCANPAALRALVMRLPAVFPGLHEVIVNTATDRG
                     QGRSVLTATQLRVVLAP"
     gene            1002..1478
                     /locus_tag="QEL58_003996"
     CDS             1002..1478
                     /locus_tag="QEL58_003996"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014647319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MerC domain-containing protein"
                     /protein_id="HDS1678422.1"
                     /translation="MDHIPSMPARALAQPPASARWHPRLDLAGAWLSLACAAHCVALP
                     LLLAFVPAAMMALRSFQHPGHGAMTLLLMMSRWEWLFALVASALALASTTAGLRRHGR
                     RWPLRLACVGAGLLLSASLYLPLKESLLWHGVATACGGVLLACAHIGNRRALHSHR"
BASE COUNT          219 a          527 c          529 g          230 t
ORIGIN      
        1 tgcccgcgcg ccgttgcatc agcgccgggt ccagttgcag ggcgcccagc aggcgcgcga
       61 tctcggcgtc cagcggcccg ctgatgcgct cgctgcgcag gcgcgagaag cgcaggccca
      121 acgcaacgtt gtcgcgcaca ctgaggaacg gcagcaggtt gaactgctgg aagatcacgc
      181 ccaggtggtc ggcgcggaag cggtcgcggc gggcgcctcg catcgcctgc aacgcctgcc
      241 cggccacctc gacgcggccc ttgccaggca gcagcacccc ggccaacaga cccagcagcg
      301 tactcttgcc gccaccactg atcccacgca gcagcacgct gctgccctgc tcgatccaca
      361 gctgcggaat gtccagcacc aggcgcaggc catagccgaa ctgcacctca tccagcctga
      421 tcagcgcagc gctgctcacg gcgccagtac cacgcgcagc tgggtggcgg tcagcacgct
      481 gcggccctgg ccacgatcgg ttgcggtgtt gacgatgacc tcgtgcaggc ctgggaacac
      541 ggctggcagg cgcatcacca gggcgcgcaa cgccgcggga ttggcacagc ggtactgcag
      601 gttggcgctg aagccggcgt gacggtgctg cccggcagcc ggtgccgcgg cggtcgcatc
      661 gaagccctcg gcgctggcat cgctgcgggc cagccggcaa tgcgccgccg tcggcagcgt
      721 tacccagctg ccactcttca gcaccgcggt ggcgcgtgcc agcgatgccc gctcagcggc
      781 gttggccggc ggtcgctcga aatcgaggat gccgataccc ggcgcctgca gggccagttc
      841 cagcacgccc tgatcgagcg cgagatcaac agtggcctgg ccgtgcacgt gcgcaccgag
      901 ctggcggacg tcatgggcct gcgcggcgct ggcagccagc agcaggaaaa aagcagcggg
      961 aagcttcatg ggggagactc caattgttac tatgtaacat tatggaccat atcccctcga
     1021 tgcccgcaag ggccctggcc cagccgccag cttcggcacg ctggcatccc cgcctcgatc
     1081 tggccggtgc ctggctgtcg ctggcctgcg ccgcccattg cgtcgccctg ccattgctgc
     1141 tggcgttcgt gccggccgcg atgatggcgc tgcgctcgtt ccagcacccc ggccatggcg
     1201 cgatgacgct gctgctgatg atgtcgcgct gggagtggct gttcgcgctg gtggcctcgg
     1261 cgctggcgct ggccagcacc acggcggggc tgcgccggca tggtcgcagg tggccgctgc
     1321 ggctggcctg cgtgggcgcc ggcctgctgc tgtcggcgtc gctgtacctg ccgctgaagg
     1381 aatcgctgct gtggcatggg gtggcaacgg cctgtggtgg cgtgctgctg gcctgtgcgc
     1441 atattggcaa ccggcgggca ctgcacagcc atcggtagcg gctcgaagat gccggccagc
     1501 ggccg
//
LOCUS       DAOKIP010000379         1491 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.388,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000379 DAOKIP010000000
VERSION     DAOKIP010000379.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 1491)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1491)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1491
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.388"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..874)
                     /locus_tag="QEL58_003997"
     CDS             complement(<1..874)
                     /locus_tag="QEL58_003997"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005415371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDS1678423.1"
                     /translation="MDLNAVRMLAQVAEARSFTVAAGQLGLSQSGLSRAISRLEATLG
                     VKLLQRNTRNVALTPDGRQFVDQVSPLLAGLDDAERQLADRPCTPSGTLKISAPSMFG
                     RKVLVPLLAPLLQQHPQLQVEAVLSDRLVDLVEEGFDAALRTGVIADQRIVARPLRPL
                     RWVTVASPRYLERCGSPADVAALQDHACLAVRNLRSGRQVDWQFLQDGQLREFTPPTR
                     MVFDSGDPLVEAAIAGIGIVQVMDFAVADALADGRLQRVLQPFEGRSRALSLIYPPSR
                     QHSPKLQVLADALLA"
     gene            980..>1491
                     /locus_tag="QEL58_003998"
     CDS             980..>1491
                     /locus_tag="QEL58_003998"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDS1678424.1"
                     /translation="MPPLKYPRWALTLLATAQLIIALDATIIFVALHDMGRALQINAQ
                     QLQWVVSAYTVAFGGSLLLGGRAADLIGRRRFYRLGMLLFALASLLGALAPNAALLII
                     ARAAQGIGAALLFPATLALINTLYAEGPVRNRALAIWSMASAVGLALGTLLGGVLTQA
                     FGWPAVLAVIV"
BASE COUNT          220 a          515 c          514 g          242 t
ORIGIN      
        1 cggccagcag cgcgtcggcc agtacctgca gcttcggtga gtgctggcgc gacggcgggt
       61 agatcaacga cagcgcacgg ctgcggcctt cgaatggctg cagcacgcgt tgcaggcggc
      121 catcggccag cgcatcggcc accgcgaaat ccatcacctg cacgatgccg atgccggcga
      181 tcgccgcttc caccagcgga tcaccgctgt cgaacaccat ccgcgtcggc ggggtgaact
      241 cacgcagctg cccgtcctgc aggaactgcc aatccacctg gcggccgctg cgcaggttgc
      301 gcaccgccag gcaggcgtga tcctgcagcg cggccacatc ggccggcgag ccgcagcgct
      361 ccaggtaccg cgggctggcc acggtcaccc agcgcagcgg acgcagggga cgcgcgacga
      421 tgcgctggtc ggcgatgacc ccggtgcgca gcgcggcatc gaacccttct tcaaccaggt
      481 cgaccagacg atcgctgagc acggcttcca cctgcagctg cggatgctgc tgcagcagcg
      541 gcgccagcag cggcaccagc accttgcgcc cgaacatcga cggcgcgctg atcttcagcg
      601 tgcccgaggg tgtgcacggg cgatcggcca gttgccgttc ggcgtcgtcg aggccggcca
      661 gcaggggcga gacctgatcg acgaactggc ggccatccgg ggtcagtgcc acgttgcggg
      721 tgttccgctg cagcagcttc acccccagcg tggcttccag ccggctgatc gcgcgcgaca
      781 gcccggactg gctcaggccg agctggccgg cagcgacggt gaagctgcgt gcctcggcca
      841 cctgtgccag catgcgcacg gcattgaggt ccatcggggc ttcattcatg ccgaaaatca
      901 tgacagatat ggtggattgg gggtttattg attcggctgc atcaatgaga ctgcgctccc
      961 ccaccgcgcc agaccaccga tgcctcccct caaatacccg cgctgggcgc tgaccctgct
     1021 ggccaccgcc cagctgatca tcgccctgga cgccaccatc atcttcgtcg ccctgcatga
     1081 catggggcgc gcgttgcaga tcaacgcgca gcagctgcaa tgggtggtca gtgcctacac
     1141 cgtggccttc ggcggcagcc tgctgctggg cgggcgtgcc gccgatctga tcggccgtcg
     1201 ccgcttctac cggctgggca tgctgctgtt cgcgctggcc tcgctgctgg gggcgctggc
     1261 gcccaatgcc gcgctgttga tcatcgcgcg cgcggcgcag ggcatcggtg ctgcattgtt
     1321 gttcccggcc acgctggcgc tgatcaacac gctgtacgcg gagggcccgg tgcgcaaccg
     1381 cgcgctggcg atctggagca tggccagcgc ggtcgggttg gcgttgggca cgttgctggg
     1441 cggggtgctg acccaggcgt tcggctggcc ggcggtgctg gcggtgatcg t
//
LOCUS       DAOKIP010000380         1479 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.389,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000380 DAOKIP010000000
VERSION     DAOKIP010000380.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 1479)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1479)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1479
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.389"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            51..959
                     /gene="tesB"
                     /locus_tag="QEL58_003999"
     CDS             51..959
                     /gene="tesB"
                     /locus_tag="QEL58_003999"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005412623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase II"
                     /protein_id="HDS1678425.1"
                     /translation="MNDTPEPVVSELIDLLTLERLEDNLFRGQSRDIGTKYVFGGQVL
                     GQALAAAQATVDNGRHVHSLHAYFLRAGNIDHPIVYDVDRTRDGGSFSVRRVTAIQHG
                     KVIFFCAASFQQAETGAEHQHKMPEVPQPEDIEPNRPLPAEVLERLPIKVQRWLSRGG
                     PFEFRHVYPRDELNPPKRPPYHQVWLRLSEPVGDAPELHQALLAYASDFHLLGTATFP
                     HGISYYHPHVQMASLDHAIWFHRPFRADDWLLYSLDSPSAQDSRGLARGQFFTRNGVL
                     VASTAQEGLIRVVPDQAAAAAVPAKE"
     gene            964..1473
                     /locus_tag="QEL58_004000"
     CDS             964..1473
                     /locus_tag="QEL58_004000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005408550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pathogenicity-like protein"
                     /protein_id="HDS1678426.1"
                     /translation="MRQIFSSQRVETVEGVAELLRGHGIEVKVTNGRSYKTRRRGQFS
                     YTDLGNASAYPAVWIVRADDQPRAREILRDARLLDTTRRDHPTAEFAFRDMPEQSSGG
                     RGWAWRIRIALLVVIAGVALVIGLRHRGTPAPAAPAPAPQAQPQQQPPAQPAPPEEEE
                     VRVRIQPSK"
BASE COUNT          240 a          563 c          469 g          207 t
ORIGIN      
        1 ccggcccgca ccggtataat caggccttct tcattgctgt ggccgccccc ttgaacgaca
       61 cgcccgaacc cgtcgtctcc gagctgatcg acctgctcac cctggagcgg ctggaggaca
      121 acctgttccg cgggcagagc cgcgacatcg gcaccaagta cgtgttcggc gggcaggtgc
      181 tgggccaggc attggccgcg gcgcaggcca cggtcgacaa cggccgccac gtgcattcgc
      241 tgcatgccta tttcctgcgc gccggcaaca tcgaccaccc gatcgtctac gacgtggacc
      301 gtacccgcga tggcggcagc ttctcggtgc gccgggtcac cgcgatccag catggcaagg
      361 tgatcttctt ctgcgcggcc tcgttccagc aggccgagac cggtgccgag caccagcaca
      421 agatgcccga agtgccgcag ccggaagaca tcgagccgaa tcgcccgctg ccggccgaag
      481 tgctggagcg gctgccgatc aaggtgcagc gctggctgtc gcgcggcggc ccgttcgaat
      541 tccgccacgt ctacccgcgt gacgaactga acccgcccaa gcgcccgccc taccaccagg
      601 tgtggctgcg cctgagcgag ccggtcggcg atgcgcccga gctgcaccaa gcgctgctgg
      661 cctatgcctc cgacttccac ctgctgggta ccgcgacatt cccgcacggc atcagctact
      721 accacccgca cgtgcagatg gcctcgctcg accacgccat ctggttccac cgcccgttcc
      781 gtgccgacga ctggctgctg tactcgctgg acagccccag cgcgcaggat tcgcgcggcc
      841 tggcccgcgg ccagttcttc acccgcaacg gcgtgctggt ggccagcacc gcgcaggaag
      901 gcctgatccg cgtcgttccc gaccaggcag cggcggccgc cgtgccggcc aaggagtaat
      961 ccgatgcgcc agatcttcag cagccagcgc gtggaaaccg tcgaaggcgt ggccgagctc
     1021 ctgcgcgggc atggcatcga ggtcaaggtg accaacgggc gctcgtacaa gacccgccgc
     1081 cgcggccagt tcagctatac cgacctgggc aacgccagcg cctacccggc ggtgtggatc
     1141 gtgcgcgccg acgaccagcc gcgcgcacgc gaaatcctgc gtgacgcgcg cctgctcgac
     1201 accacccgtc gcgaccaccc gaccgccgag ttcgccttcc gcgacatgcc ggaacagagc
     1261 agcggcggcc gcggctgggc ctggcgcatc cgcatcgccc tgctggtggt gatcgccggc
     1321 gtggcgctgg tgatcggcct gcgccatcgc ggcaccccgg cgccggccgc accggcccct
     1381 gccccgcagg cgcagccgca gcagcagccc cccgcccaac cggctccgcc ggaagaagaa
     1441 gaagtccggg tccgcatcca gccgtcgaaa tgacacacg
//
LOCUS       DAOKIP010000381         1467 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.390,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000381 DAOKIP010000000
VERSION     DAOKIP010000381.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 1467)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1467)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1467
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.390"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            98..718
                     /locus_tag="QEL58_004001"
     CDS             98..718
                     /locus_tag="QEL58_004001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010481850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LemA family protein"
                     /protein_id="HDS1678427.1"
                     /translation="MRLFTRILPLMLLASLLSGCGYNAIQQKDEAVKASWSEVINQYK
                     RRADLVPNLVQTVKGFASQEERVLTEVTNARSRVGQINVNADDEASLKQFQQAQGELG
                     SALSRLLVVTENYPQLKSDQNFRDLQAQLEGTENRVTVARGRYIQQVQDYNTYIRSFP
                     QVITAKIFGYKTKPNFTVDNEAQISSAPAVDFGNAPQQQPAPQPGH"
     gene            722..>1467
                     /locus_tag="QEL58_004002"
     CDS             722..>1467
                     /locus_tag="QEL58_004002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TPM domain-containing protein"
                     /protein_id="HDS1678428.1"
                     /translation="MRLATALLALLLWLPLASQAQQLAPIPALDSPVVDTTGTLDAAQ
                     KQALVQQATDLQQRKGSQLQVLVVPTTQPEDIAQYTTRVFDQWQIGRKGVDDGVLLVV
                     AKDDRRVRIEPGYGLEGAIPDAIANRVIQEYLVPRFRSGDYAGGITDATGVLVKLIDG
                     EDLPAPVSGQRGGEPDGGGDTWFLALFIGVFAGSILRGVFSRVPRPLRGLLGGGGAAL
                     AAFLFTSTLLASGLAGIVGLIVAMLSGHPGR"
BASE COUNT          244 a          514 c          484 g          225 t
ORIGIN      
        1 ccatgagcat ggccaccgcg gagggggcgg cgcccgatgg ccgaccttca cccgaaccat
       61 ggcatgctcg gcgccacgtc cacccggaac ctccgccatg cgcctgttca cccgtatctt
      121 gcccctgatg ctgctggcct ccctgctctc cggctgcggc tacaacgcca tccagcagaa
      181 ggatgaagcg gtcaaggcca gctggtcgga ggtcatcaac cagtacaagc gccgcgccga
      241 cctggtgccc aacctggtgc agaccgtgaa gggcttcgcc agccaggaag agcgcgtgct
      301 gaccgaagtc accaacgccc gttcgcgggt cggtcagatc aacgtcaacg ccgacgacga
      361 agcctcgctc aagcagttcc agcaggccca gggcgaactc ggcagcgcgc tgtcgcggct
      421 gctggtggtc accgaaaact atccgcagct gaagtccgac cagaacttcc gcgacctgca
      481 ggcgcagctg gaaggcaccg agaaccgggt caccgtcgcc cgtggccgtt acatccagca
      541 ggtgcaggac tacaacacct acatccgctc gttcccgcag gtgatcaccg ccaagatctt
      601 cggctacaag accaagccga acttcaccgt ggacaacgaa gcgcagatct ccagcgcgcc
      661 ggcggtcgat ttcggcaacg cgccgcagca gcagccggcg ccgcagccgg gccactgacc
      721 gatgcgcctg gccactgcgc tgctggccct gctgctgtgg ctgccgctgg cgtcgcaggc
      781 acagcagctg gcaccgattc cggcgctgga ttcgccggtg gtcgatacca ccggcacgct
      841 cgacgccgcg cagaagcagg cgctggtgca gcaggcgact gacctgcagc agcgcaaggg
      901 cagccagctg caggtgctgg tcgtgcccac cacccagccg gaagacatcg cgcagtacac
      961 cacgcgggtc ttcgaccagt ggcagatcgg ccgcaagggc gtggatgacg gcgtgctgct
     1021 ggtggtggcc aaggatgacc ggcgtgtgcg catcgagccg ggctacggcc tggagggcgc
     1081 gattcccgat gccatcgcca accgcgtcat ccaggagtac ctggtgccgc gtttccgcag
     1141 cggtgactat gccggtggca tcactgacgc caccggcgtg ctggtcaagc tgatcgatgg
     1201 cgaagacctg ccggcacccg tcagtggcca gcggggcggt gagcccgacg gcggtggcga
     1261 tacctggttc ctggctctgt tcatcggtgt gttcgccggc agcatcctgc gcggcgtgtt
     1321 ctcgcgcgtg ccgcgcccgc tgcgcggcct cctcggcggc gggggagcgg cactggcggc
     1381 gttcctgttc acctccacgc tgttggccag cggcctggcc ggcatcgttg gcctgattgt
     1441 cgccatgctc tccgggcacc cgggccg
//
LOCUS       DAOKIP010000382         1454 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.391,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000382 DAOKIP010000000
VERSION     DAOKIP010000382.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 1454)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1454)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1454
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.391"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            186..1445
                     /locus_tag="QEL58_004003"
     CDS             186..1445
                     /locus_tag="QEL58_004003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trans-2-enoyl-CoA reductase family protein"
                     /protein_id="HDS1678429.1"
                     /translation="MVIKPRVRGFICVTTHPTGCEAVVKQQIDYIRARPPIQNGPKRV
                     LVIGASTGYGLAARITAAFGSGAATLGIFFERPGSESKPGTAGWYNSAAFHKYADEAG
                     LYAKSINGDAFSDEVKAKAIEMIKADLGQVDQVVYSLAAPRRKHPKTGEIISSTLKPI
                     GEPITLRGLDTDKEVLTETHLQPATAEEIAGTVAVMGGEDWQMWIDALADAGVLANGC
                     TTTAFTYVGEEITQAIYWNGSIGAAKKDLDTKVLGLREKLAKIGGDARVSVLKAVVTQ
                     ASSAIPTMPLYLSLLFKVMKEKGTHEGCIEQLDVLYDILYGGKADGVAVDRLRHDLVD
                     ADGHTVALVDEEGRLRADYKEMAADVQGKVVALWPQVTNENLYEISDLAGYKADFLRL
                     FGFGVEGVDYEADVNPDVRIENLVDMT"
BASE COUNT          280 a          473 c          466 g          235 t
ORIGIN      
        1 gttgacgttg ctctggcttc cggcgggtgc agggcgcagc cctgcagaac aaaatcccac
       61 cctacgccag cgtcggttgt gcaatcttcc cccgcgcact acgatcctgc ggttcgcgcg
      121 cgcaggcgcg cacccgtatt cctgctgagc gccccgtgcg ccgcatctgc caacccgagg
      181 tatccatggt catcaaaccg cgcgtccgcg gcttcatctg cgtcaccacc cacccgaccg
      241 gctgcgaggc cgtggtcaag cagcagatcg actacatccg cgcgcgtccg ccgatccaga
      301 acggccccaa gcgcgtgctg gtcattggtg cctccaccgg ctacggcctg gcggcgcgca
      361 tcactgcggc gttcggtagc ggcgcggcga ccctgggcat cttcttcgag cgtccgggca
      421 gcgaatccaa gccgggcacc gccggctggt acaactcggc cgcgttccac aagtacgccg
      481 acgaagccgg cctgtacgcc aagagcatca acggcgatgc cttctccgat gaggtgaagg
      541 ccaaggccat cgagatgatc aaggccgatc ttggccaggt cgaccaggtg gtctatagcc
      601 tggctgcacc gcgccgcaag cacccgaaga ccggcgaaat catcagctcc acgctgaagc
      661 cgatcggtga gccgatcacg ctgcgtggcc tggataccga caaggaagtg ctgaccgaga
      721 cccacctgca gccggctacc gccgaagaaa tcgccggcac cgtcgcggtc atgggcggtg
      781 aagactggca gatgtggatc gatgcgctgg ccgatgccgg tgtgctggcc aacggctgca
      841 ccaccaccgc cttcacctac gtgggcgaag agatcaccca ggccatctac tggaatggct
      901 cgatcggtgc cgccaagaag gacctggaca ccaaggtgct gggcctgcgc gagaagctgg
      961 caaagatcgg tggcgatgcg cgcgtgtcgg tgctgaaggc cgtggtcacc caggccagct
     1021 cggccattcc gaccatgccg ctgtacctgt cgctgctgtt caaggtgatg aaggaaaagg
     1081 gcacccatga aggctgcatc gagcagctgg acgtgctgta cgacatcctc tacggcggca
     1141 aggctgacgg cgtggcggtc gatcgcctgc gccacgacct ggtcgatgcc gatggccaca
     1201 ccgtcgcgct ggtcgatgag gaaggccgcc tgcgtgccga ctacaaggaa atggccgcgg
     1261 acgtgcaggg caaggtggtt gcgctgtggc cgcaggtgac caacgagaac ctgtacgaga
     1321 tcagcgacct ggccggctac aaggccgact tcctgcgcct gttcggtttc ggcgtggaag
     1381 gtgtcgacta cgaagccgac gtcaatccgg acgtcaggat cgagaatctg gtcgacatga
     1441 cctgatcaat gaaa
//
LOCUS       DAOKIP010000383         1452 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.392,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000383 DAOKIP010000000
VERSION     DAOKIP010000383.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 1452)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1452)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1452
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.392"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            <1..240
                     /locus_tag="QEL58_004004"
     CDS             <1..240
                     /locus_tag="QEL58_004004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003486726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HDS1678430.1"
                     /translation="EGGRHTPFFNGYRPQFYFRTTDITGAAALPEGVEMVMPGDNVKM
                     VVTLINPVAMDEGLRFAIREGGRTVGAGVVSKIIE"
     gene            343..418
                     /locus_tag="QEL58_004005"
     tRNA            343..418
                     /locus_tag="QEL58_004005"
                     /product="tRNA-Trp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:376..378,aa:Trp,seq:cca)
     gene            468..881
                     /gene="secE"
                     /locus_tag="QEL58_004006"
     CDS             468..881
                     /gene="secE"
                     /locus_tag="QEL58_004006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005993330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecE"
                     /protein_id="HDS1678431.1"
                     /translation="MNSKIEHSKDNSAHGGDIVKYVAASLLVLAGLFVWFWFSADSGR
                     AAQLGAWAGQLRALAVVVGLVGGIGVFMLTGKGRDTREFLSESRFELRKVVWPTRQEA
                     IRMTWVVIVVVLILSLLLGGFDFLIQKLTQWFLSR"
     gene            892..1452
                     /gene="nusG"
                     /locus_tag="QEL58_004007"
     CDS             892..1452
                     /gene="nusG"
                     /locus_tag="QEL58_004007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019186115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusG"
                     /protein_id="HDS1678432.1"
                     /translation="MKRWYVVHAYSGFEKSVAQALRDRIVRDGMEERFGDVLVPTEEV
                     VEMRAGQKRRSERKFFPGYVLVQIETHEEAGIPRIDNESWHLVKETPRVMGFIGGTAD
                     RPLPIADSEAEAILNRVQEGVEKPRPKVLFEPGQMVRVTDGPFNDFNGVVEEVNYEKS
                     RLRVSVLIFGRATPVELEFGQVEKAV"
BASE COUNT          257 a          444 c          469 g          282 t
ORIGIN      
        1 gaaggcggcc gccacacccc gttcttcaac ggctaccgcc cgcagttcta cttccgcacc
       61 accgacatca ccggcgccgc tgcactgccg gaaggcgtcg aaatggtgat gccgggtgac
      121 aacgtcaaga tggtcgtcac cctgatcaac ccggtggcaa tggacgaagg cctgcgcttc
      181 gccatccgcg aaggcggccg taccgtcggc gccggcgtcg tctcgaagat catcgagtaa
      241 gcctgcagta ccggtggttg catagcgccg ccggttacgc gaatggcggg ccgggaacct
      301 cggtccgcct tcgccgtcta agggaaggca agttttaaac gtacgccagt agctcaattg
      361 gcagagcagc ggtctccaaa accgcaggtt gggggttcga gtccctcctg gcgtgccatc
      421 tgcccacctt atccagcggc ctgggccgct aaagcagaca cagccggatg aatagcaaga
      481 tcgaacactc caaggacaac tccgcccacg gtggagatat cgtcaagtat gtcgccgcat
      541 cgctgctggt gctggccggt ctgttcgtct ggttctggtt ctccgccgac tccggtcgcg
      601 ccgcccagct gggtgcgtgg gcgggtcagc tgcgtgcgtt ggcggtcgtg gtcggtctgg
      661 ttggcggtat cggcgtgttc atgctgaccg gcaaggggcg cgacacccgc gaattcctct
      721 ccgagtcgcg cttcgaactg cgcaaggtgg tctggccgac gcgccaggaa gccatccgca
      781 tgacgtgggt cgtgatcgtc gtggtgctca tcctcagcct gctgctgggt ggcttcgact
      841 tcctgatcca gaaactgact cagtggttcc tgagccgcta aggagaattg catgaagcgt
      901 tggtacgtcg ttcacgccta ttcgggcttc gagaagtcgg tggcgcaggc tttgcgcgat
      961 cgcatcgtcc gtgacggcat ggaagagcgc ttcggcgacg tcctggtccc gaccgaagaa
     1021 gtggtcgaga tgcgcgctgg ccagaagcgc cgttccgagc gcaagttctt cccgggttac
     1081 gtgctggtcc agatcgagac ccacgaagaa gccggtattc cgcgcatcga caacgaaagc
     1141 tggcacctgg tcaaggagac cccgcgcgtg atgggcttca tcggcggtac cgccgatcgt
     1201 ccgctgccga tcgccgattc cgaggccgaa gccatcctga atcgcgttca ggaaggtgtc
     1261 gagaagccgc gtccgaaggt tctgttcgag ccgggccaga tggtccgcgt taccgatggc
     1321 ccgttcaacg atttcaatgg cgtcgtcgaa gaggtcaact acgagaagag ccgtctgcgc
     1381 gtctcggtgc tgatcttcgg tcgtgccacc ccggtcgagc tcgagttcgg ccaggtcgag
     1441 aaggccgtct ga
//
LOCUS       DAOKIP010000384         1431 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.393,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000384 DAOKIP010000000
VERSION     DAOKIP010000384.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 1431)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1431)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1431
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.393"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            60..716
                     /gene="flgA"
                     /locus_tag="QEL58_004008"
     CDS             60..716
                     /gene="flgA"
                     /locus_tag="QEL58_004008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body P-ring formation protein
                     FlgA"
                     /protein_id="HDS1678433.1"
                     /translation="MRRVTFLYAIALALVSPWAGAADWHSVASIRAAALSTLPAGSEG
                     EAQVADALRLPKCGGALQVQPTANTTVEVSCPDAGGWRLFVPVKVRRNQTVLVLNRGI
                     GTGETLTAADITTAQRDAARIAGAVLADPNAAIGRIARRPLQAGALLSNNDLVVQRLI
                     KRGDNVALVSRRGSVEVRIAGRAMGDAGENERVSVENLSSRRIVQGTVDAAGDVIVAR
                     "
     gene            792..1097
                     /gene="flgM"
                     /locus_tag="QEL58_004009"
     CDS             792..1097
                     /gene="flgM"
                     /locus_tag="QEL58_004009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014503328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis anti-sigma factor FlgM"
                     /protein_id="HDS1678434.1"
                     /translation="MSQKIDGNLQVPQALRSVTTPASKPGVSSDSPARPVEAADSLRL
                     TGEATNLQAIERELTTAPAIDAQRVAAVRESLQNGTYKINPDAIASRMLDLDQQLQG"
     gene            1094..>1431
                     /locus_tag="QEL58_004010"
     CDS             1094..>1431
                     /locus_tag="QEL58_004010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006366325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar protein FlgN"
                     /protein_id="HDS1678435.1"
                     /translation="MTAAMSEPLQRLAQALDVERQALVEHDVHALIRATGAKLEALRA
                     LEGAPPVGEGEQLQELAERNRANGVLLSRRRREVNWALRQLGRTEDASAYDAKGQSHT
                     VTARRPLAVA"
BASE COUNT          238 a          500 c          486 g          207 t
ORIGIN      
        1 cgtcgatctg gcacatccct tgcacgcagc tgggccagat cccctcgaca ggaggcgcca
       61 tgcgccgggt cacatttctc tatgccatcg ccctggcgct ggtctcgccc tgggcaggcg
      121 ccgctgactg gcattccgtg gccagcatcc gggctgcggc gttgtcgacg ctgccggccg
      181 gcagcgaagg cgaggcccag gtggccgacg cgctgcgcct gccgaagtgt ggtggcgcgc
      241 tgcaggtgca gcccactgcc aacaccacgg tggaggtcag ctgtcccgat gcaggcggtt
      301 ggcgcctgtt cgtgccggtg aaggtacggc gcaaccagac cgtgctggtg ctcaatcgtg
      361 gaatcggcac tggagaaacc cttaccgccg ccgatatcac cactgcccag cgtgatgctg
      421 cccggattgc cggtgcggtg ctggccgatc ccaacgcggc gatcggccgc atcgcccgcc
      481 gtccgctgca ggccggggcc ctgctgtcga acaacgacct ggtggtgcag cgtctcatca
      541 agcgaggaga caatgtggcc ctggtgtcgc gtcgcggctc ggtcgaggtg cgcattgccg
      601 gccgtgcgat gggtgacgcg ggcgagaatg aacgggtctc ggtggagaac ctgtcctcgc
      661 ggaggatcgt gcagggcacg gtcgatgccg caggtgacgt aatcgtggcg cgttgaatta
      721 ccgcagaata tccctaaaga tcacggccca gcggccgtta tcccttgtga acggcaactc
      781 caggacaccc catgagccag aaaatcgacg gcaacctgca ggtcccccag gcactgcgca
      841 gcgtgacgac cccggccagc aagcccggcg tcagcagcga ttcgccggca cgcccggtcg
      901 aggccgccga cagcctgcgc ctgaccggcg aggccaccaa tctgcaggcc atcgagcgtg
      961 agctgaccac cgccccggcg atcgacgccc agcgcgtggc cgccgtgcgc gagtcgctgc
     1021 agaacggcac ctacaagatc aatccggacg cgatcgcttc gcgcatgctc gatctggacc
     1081 agcagctgca gggatgaccg cagcgatgag cgagccgctg cagcgtctcg cccaggccct
     1141 ggacgttgag cgccaggccc tggtcgagca cgacgtgcac gccctgatcc gtgccaccgg
     1201 cgccaagctg gaagcgctgc gtgcgctgga aggcgcaccg ccggtcggcg agggcgaaca
     1261 gctgcaggaa ctggccgaac gcaaccgggc caacggtgtg ctgctgtcgc gccgccgccg
     1321 tgaggtcaac tgggcgctgc gccagctggg ccgtaccgaa gacgcctcgg cctacgacgc
     1381 caagggccag tcgcacacgg tcaccgcccg ccgccccctc gccgtcgcct g
//
LOCUS       DAOKIP010000385         1422 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.394,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000385 DAOKIP010000000
VERSION     DAOKIP010000385.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 1422)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1422)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1422
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.394"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(5..1369)
                     /locus_tag="QEL58_004011"
     CDS             complement(5..1369)
                     /locus_tag="QEL58_004011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005412448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate synthase component I"
                     /protein_id="HDS1678436.1"
                     /translation="MTHAPLIHPLPHPIDLLALQQHDPARFPLLMESTASGTAQGRWS
                     LLLAAQGDVLRLDADGQVRDQHDAVRAGSFLQVLDRAWQAERLPHDGSHSLPFRGGWA
                     LMLDYEVASQIEPVLPARARDDGRPTALALRCPAAVLHDHHNDASFVIAEAGQQVLLD
                     ALVAQASAALPEAGLGWQPPQSVGEDAPQRFTDGVRRVIEYLRAGDVFQVNLSRRWSA
                     RFAAPVSPQALYAQLRRANPAPFAGLFGAHGRHVVSSSPERLVSVHAGHAQTRPIAGT
                     RPRFEGDDDAARIQELVGHPKERAEHVMLIDLERNDLGRICLPGTVVVDELMTVESYA
                     HVHHIVSNVSGHLRPEVTPGEVIAATFPGGTITGCPKVRCMQIISELEQVPRGAYTGA
                     FGWLNRDGDLDLNILIRTAEVEGDEVSFRTGAGIVVDSDPDKELDETRAKARGLLRAL
                     GQQG"
BASE COUNT          203 a          508 c          504 g          207 t
ORIGIN      
        1 gcgcctagcc ctgctggccc agcgcacgca gcaggccgcg cgccttggcc cgggtctcgt
       61 ccagctcctt gtccgggtcc gaatcgacca cgatgccggc gccggtacgg aagctgacct
      121 catcgccctc cacttcggcg gtgcggatca ggatgttcag gtccaggtcg ccatcgcggt
      181 tcagccaacc gaacgccccg gtgtaggcgc cgcgcggcac ctgctccagc tcgctgatga
      241 tctgcatgca gcgcaccttc gggcagccgg tgatggtgcc gcccgggaag gtcgcggcaa
      301 tcacctcgcc gggggtgacc tccgggcgca gatggccact gacgttgctg acgatgtggt
      361 gcacgtgggc gtaactctcc acggtcatca gctcatcgac caccacggtg ccgggcaggc
      421 agatgcggcc caggtcgttg cgctccaggt cgatcagcat cacgtgctcg gcacgctcct
      481 tcgggtggcc gaccagctcc tggatgcgcg cggcatcgtc atcgccttca aaccgcggac
      541 gggtaccggc aatcggccgg gtctgcgcgt ggccggcgtg caccgacacc agccgttccg
      601 gcgaggaact gaccacgtgg cggccgtgcg cgccgaacag gccggcgaac ggtgccgggt
      661 tggcgcggcg cagctgcgcg tacagcgcct gcgggctgac cggcgcagcg aaccgggcgc
      721 tccagcgccg cgacaggttc acctggaaca cgtcgccggc acgcaggtac tcgatcaccc
      781 ggcgcacgcc gtcggtgaag cgctgcggcg catcctcgcc caccgactgc ggcggctgcc
      841 agcccagccc ggcctcgggc agcgcggccg aggcctgtgc caccagtgca tccagcagca
      901 cctgctggcc cgcttcggcg atcacgaagc tggcatcgtt gtggtggtcg tgcagcaccg
      961 ccgccgggca gcgcagcgcc agcgcggtcg ggcggccgtc gtcgcgcgcg cgcgccggca
     1021 gcaccggttc gatctggctg gccacttcgt agtccagcat cagcgcccag ccgccacgga
     1081 acggcaggct gtggctgccg tcatgcggca ggcgttcggc ctgccaggcg cggtccagca
     1141 cctgcaggaa gctgcccgcg cgtacggcgt cgtgctggtc acgcacctgt ccatcggcat
     1201 ccaagcgcag gacatcgccc tgtgcggcca gcagcaggct ccagcggccc tgggcggtac
     1261 ccgaggcagt ggattccatc agcagcggga agcgcgccgg atcgtgctgc tgcagggcga
     1321 gcagatcgat cgggtgcggc agcgggtgga tcagcggtgc gtgggtcatg gcggccagtt
     1381 cagggattca gatgcacgga agccgccttg cggcggcctc ct
//
LOCUS       DAOKIP010000386         1419 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.395,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000386 DAOKIP010000000
VERSION     DAOKIP010000386.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 1419)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1419)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1419
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.395"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..1290)
                     /locus_tag="QEL58_004012"
     CDS             complement(<1..1290)
                     /locus_tag="QEL58_004012"
                     /EC_number="6.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005407712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan--tRNA ligase"
                     /protein_id="HDS1678437.1"
                     /translation="MTTRVLTGITPSGTPHLGNYVGAIRPAIAASRAPGIESFFFLAD
                     LHSLIKSQDPQRTQRATLEIAASWLACGLDPEHVWFYRQSDIRETTELMWFLTAIASK
                     GILNRAHAYKAAVDKNREEGVDEDAGVSAGLFMYPVLMAADILIFKANQVPVGRDQIQ
                     HIEMARDFAQRFNHVYGKEYFPLPDVVIDEQVATLAGLDGRKMSKSYHNTIPLFVPRE
                     ELKKLVFSILTDSRAPGEPKDTEGSALFQMYQAFATPEQTAEFAKAFAAGISWGDAKQ
                     QLFERIDSELSPLRERYNALMAEPEKIEALLKRRGQQLREQLAAPLLDELRHAVGLRD
                     LSSAGDIASEDAGVARVAPPLFKQYREKDGRFYFKLTAGDGTLLIQSEGFDSPRDAGQ
                     LIAVIKQAEQGDQLQSELFKLEAEVDAVLAALAALREE"
BASE COUNT          215 a          478 c          468 g          258 t
ORIGIN      
        1 ttcttcgcgc agcgccgcca gggcagccag caccgcatcc acctcggctt ccagcttgaa
       61 cagctcactc tgcagctggt cgccctgctc ggcctgcttg atcaccgcaa tcagctggcc
      121 cgcatcgcgc ggcgaatcga agccttcgct ctggatgagc agcgtgccgt cgccggcggt
      181 cagcttgaag tagaaacggc cgtccttctc gcggtactgc ttgaacagcg gcggtgccac
      241 gcgggccaca ccggcatctt cgctggcgat gtcgccggcg ctggacaggt cgcgcaggcc
      301 caccgcatgg cgcagctcgt ccagcagcgg cgctgccagc tgctcgcgca gctgctggcc
      361 acggcgcttg agcagcgctt caatcttttc cggctcggcc atcagcgcgt tgtagcgctc
      421 gcgcagcggc gaaagctcgc tgtcgatgcg ctcgaacagc tgctgcttgg catcgcccca
      481 gctgatgccg gccgcgaacg ccttggcgaa ttcggcggtc tgctccgggg tggcgaacgc
      541 ctggtacatc tggaacagcg ccgagccctc ggtgtccttc ggctcgcccg gtgcacgcga
      601 atcggtgagg atcgagaaca ccagcttctt cagctcctcg cgcggcacga acagcggaat
      661 ggtgttgtgg tagctcttgc tcatcttgcg gccatcgagg ccggccagcg tcgccacctg
      721 ctcgtcgatc accacgtccg gcagcgggaa atactccttg ccgtacacgt ggttgaagcg
      781 ctgggcaaaa tcgcgcgcca tctcgatgtg ctggatctgg tcgcggccca ccggcacctg
      841 gttggccttg aagatcagga tgtcggcggc catcagcacc gggtacatga acaggccggc
      901 gctgacgccc gcatcctcgt ccacgccttc ctcgcggttc ttgtccaccg ccgccttgta
      961 ggcgtgcgcg cggttgagga tgcccttgct ggcgatggca gtcaggaacc acatcagctc
     1021 ggtggtctcg cggatgtcgc tctggcggta gaaccacacg tgttccgggt ccaggccgca
     1081 ggccagccag ctggccgcga tctccagggt cgcgcgctgg gtgcgctgcg ggtcctgcga
     1141 cttgatcagg ctgtgcaggt cggccaggaa gaagaagctc tcgatccccg gggcgcggct
     1201 ggcggcgatt gccggacgga tggcgccaac gtagttgccc aggtggggcg tgccggaggg
     1261 ggtgatgccg gtaaggactc gggtcgtcat gactgcgtgg ggtaaccttc gatgaacggg
     1321 gccagtttac cttgcacgcc accaaccccg tcagggcccg cggcgcgttc attcacgcaa
     1381 ccccgctgga gacgcccgat gaaacgcctg ctgcccctg
//
LOCUS       DAOKIP010000387         1415 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.396,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000387 DAOKIP010000000
VERSION     DAOKIP010000387.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 1415)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1415)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1415
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.396"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            284..>1415
                     /locus_tag="QEL58_004013"
     rRNA            284..>1415
                     /locus_tag="QEL58_004013"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT          392 a          315 c          418 g          290 t
ORIGIN      
        1 tagagcgcac ccctgataag ggtgaggtcg gtagttcgag tctacccaga cccaccattc
       61 tctgaatgac gcatacattc gatcttatat acgcatcagc actgtggctg gtacgtgttc
      121 ttttaaaact tgtgacgtag cgagcgtttg agatgttcta tcagacgtgt cgtgaggcta
      181 aggcgagaga cataagtctc tttattgatt gagtcgttat attcgtatcc gggctttgta
      241 cccccgggtc acatatataa cccaaggcaa cttgcggtta tatggtcaag cgaataagcg
      301 cacacggtgg atgccttggc ggtcagaggc gatgaaggac gtggcagcct gcgaaaagta
      361 tcggggagct ggcaacaagc tttgatccgg taatgtccga atggggaaac ccacccgctt
      421 gcgggtatcc tgcagtgaat acatagctgc tggaagcgaa cctggtgaac tgaaatatct
      481 aagtaaccag aggaaaagaa atcaaccgag attccgtaag tagcgacgag cgaacgcgga
      541 ctagccctta agctgatttg gttctaggaa aacgctctgg aaagagcggc catagaaggt
      601 gatagccctg tatctgaaag ggccatttca gtgaagacga gtagggcggg gcacgtgaaa
      661 ccctgtctga acatgggggg accatcctcc aaggctaaat actactgacc gaccgatagt
      721 gaaccagtac cgtgagggaa aggcgaaaag aaccccggag aggggagtga aatagaacct
      781 gaaaccgtgt gcgtacaagc agtaggagct ccgcaaggag tgactgcgta ccttttgtat
      841 aatgggtcag cgacttactg ttcgtggcaa gcttaaccgt ataggggagg cgaagggaaa
      901 ccgagtctga taagggcgca tagtcgcggg cagtagaccc gaaaccgggt gatctagtca
      961 tgcccagggt gaaggtgcgg taacacgcac tggaggcccg aacccactcc cgttgcaaag
     1021 gtaggggatg aggtgtgatt aggagtgaaa agctaatcga acccggagat agctggttct
     1081 cctcgaaagc tatttaggta gcgcctcata tgtatcctct cgggggtaga gcactgttat
     1141 ggctaggggg tcatcgcgac ttaccaaacc attgcaaact ccgaataccg agacggactg
     1201 tatgggagac acacggcggg tgctaacgtc cgtcgtgaaa agggaaacaa cccagaccca
     1261 cagctaaggt cccaaattca ctgctaagtg gaaaaccatg tggaaaggca cagacagcca
     1321 ggaggttggc ttagaagcag ccacccttta aagaaagcgt aatagctcac tggtcgagtc
     1381 ggtctgcggg gaagatttaa cggggctaag cagtg
//
LOCUS       DAOKIP010000388         1401 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.397,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000388 DAOKIP010000000
VERSION     DAOKIP010000388.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 1401)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1401)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1401
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.397"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            38..1399
                     /locus_tag="QEL58_004014"
     CDS             38..1399
                     /locus_tag="QEL58_004014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005416492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication-associated recombination protein A"
                     /protein_id="HDS1678438.1"
                     /translation="MARHRSTSFPGPDLLSVDREHLRPLAERMRPRTLDEMVGQKRLL
                     APDSALRRAVESGRVHSMILWGPPGCGKTTLALLLAEYSDAEFRAISAVLSGLPEVRQ
                     VLAEAAQRFAEGRRTVLFVDEVHRFNKAQQDAFLPHIERGTILFVGATTENPSFELNS
                     ALLSRCRVHVLEGVSPTDIVEALERALGDRERGLGEEGIEVAPELLLEIATAADGDVR
                     RALTLLEIAAELAGGEGGRITPQTLTQVLADRTRRFDKGGEQFYDQISALHKSVRSSN
                     PDAALYWLTRMLDGGCDPSYLARRLTRMAIEDIGLADPRAQSMALEAWDIYERLGSPE
                     GELAFAQLVLYLASTAKSNAGYAAFNQAKADVRESGTEEVPLHLRNAPTKLMKELGYG
                     AEYQYDHDAEGGIALDQTGFPDAMGERVYYNPVPRGLEIKLKEKLDRLRAEREAARAA
                     KGH"
BASE COUNT          234 a          458 c          483 g          226 t
ORIGIN      
        1 aaccttggtt ggcacgctct cgcggtacaa tggacgggtg gcaagacatc gttcaacttc
       61 cttccctggc cccgatctgc tgagcgtcga tcgggaacat ctgcgcccgc tggccgagcg
      121 catgcgcccg cgcaccctgg acgaaatggt cgggcagaag cgcctgctgg cgccggacag
      181 cgcgctgcgc cgcgcggtcg aatccggtcg cgtccattcg atgatcctgt gggggccgcc
      241 gggctgtggc aagaccacgc tggcgctgct gttggccgag tactccgacg ccgagttccg
      301 tgccatctcc gccgtgctgt ccggcctgcc ggaagtgcgt caggtgctgg ccgaggctgc
      361 gcaacggttc gccgaaggtc gccgcacggt gctgttcgtg gatgaggtgc atcgcttcaa
      421 caaggcgcag caggatgcgt tcctgccgca catcgagcgg ggcaccatcc tgttcgttgg
      481 cgccactacc gagaatcctt cgttcgagct gaattcggca ttgctgtcgc gctgccgcgt
      541 gcatgtgctg gagggcgtct cgcccaccga catcgtcgaa gcgctggagc gtgcgctggg
      601 tgatcgtgag cgcggcctgg gcgaagaggg catcgaggtc gctcccgagc tgctgctgga
      661 aatcgccacc gcagctgatg gcgacgtgcg acgcgcgctg accctgctgg aaatcgccgc
      721 cgagctggcg ggcggcgagg gtggccgcat caccccgcag accctgaccc aggtgctggc
      781 agatcgcacc cggcgcttcg acaagggcgg cgagcagttc tacgaccaga tctcggcatt
      841 gcacaagtcc gtgcgcagct ccaatcccga tgccgcgctg tactggctga cccgcatgct
      901 cgatggcggc tgcgatccgt cctaccttgc gcgccggctg acccgcatgg ccatcgagga
      961 catcggcctg gccgatccgc gcgcgcagag catggcgctg gaggcctggg acatctacga
     1021 gcggctgggc agcccggaag gtgagcttgc cttcgcccag ctggtgctct atctggccag
     1081 caccgccaag tcgaatgccg gctatgcggc cttcaaccag gccaaggccg acgtgcgcga
     1141 gagtggtacc gaggaggtgc cgctgcacct gcgcaacgcg ccgaccaagc tgatgaagga
     1201 gctgggctac ggtgcggagt accagtacga ccacgacgcc gaaggcggca tcgccctgga
     1261 ccagaccggc ttcccggatg cgatgggcga gcgcgtgtac tacaacccgg tgccacgcgg
     1321 cctggaaatc aagctgaagg aaaagctgga tcggctgcgc gccgagcgcg aagcggccag
     1381 ggcggcaaaa ggccattaag c
//
LOCUS       DAOKIP010000389         1399 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.398,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000389 DAOKIP010000000
VERSION     DAOKIP010000389.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 1399)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1399)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1399
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.398"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(93..1379)
                     /locus_tag="QEL58_004015"
     CDS             complement(93..1379)
                     /locus_tag="QEL58_004015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510561.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF445 family protein"
                     /protein_id="HDS1678439.1"
                     /translation="MTPANDPRRAQLRRLKALALGLLLLMLAGFAVSHWQGERGIWAW
                     VSAFCEAAAVGALADWFAVVALFRRPMGLPIPHTAIIPRSKERIGDSLALFVRDQFLE
                     PGVLLAKLQVFDPASRLGSWLADPARSRMLADMARGWALQALDFFDEAAVRRQLHGFV
                     VQQLRQWNAAATAGELLALLTADGRHQRVLDEGLQRLGRWLEQAEVKERASQLIVRYI
                     QREWPTLSSTVNWVKPIDEIGDSLAERLARAVLEELQQVLAEPEHPLRQDYETWLQAY
                     VQRLREDPALAERIEQLKQEMIDHPALQEYVQGLWARIHASLRADLQRDDSALVGHLQ
                     RSLASLGSSLQADPALREALNQHLLEGAQRLTGRLREGVTTHIAQTVKSWDERHLVEQ
                     LELSVGRDLQFIRFNGTLVGGLIGLLLHAATVIFRF"
BASE COUNT          224 a          495 c          461 g          219 t
ORIGIN      
        1 ttggctaagc gtacaaccga ttagcaaatg ataggcattc gcatttcgtt aatcaagcgt
       61 gacgacttct gccggtggat cgaggcgcgc gttcagaacc ggaagatcac cgtcgccgca
      121 tgcagcagca ggccgatcag cccgccgacc agggtgccgt tgaagcggat gaactgcagg
      181 tcgcggccta cgctcagttc cagctgctcg accagatgcc gctcatccca gctcttcacg
      241 gtctgtgcga tatgcgtggt cacgccctcg cgcaggcgcc cggtcagccg ctgcgcgcct
      301 tcaagcaggt gctggttcag tgcctcgcgc agggcagggt cggcctgcag gctgctgccc
      361 agcgaggcca ggctgcgctg caggtggccg accagtgcgg agtcgtcgcg ctgcaggtcg
      421 gcacgcaggc tggcatggat gcgcgcccac agcccctgca cgtactcctg cagggcaggg
      481 tggtcgatca tttcctgctt gagctgttcg atgcgctcgg ccagcgccgg atcctcgcgc
      541 aggcgctgca cgtaggcctg cagccaggtc tcgtagtcct ggcgcagcgg atgctccggc
      601 tcggccagca cctgctgcag ttcttccagc accgcgcgcg ccaggcgctc ggccaggctg
      661 tcgccgatct cgtcgatcgg cttgacccag ttcaccgtgc tcgacagcgt cggccattcg
      721 cgctggatgt agcgcacgat cagctgcgag gcgcgctcct tcacttccgc ctgctccagc
      781 cagcgcccca gccgctgcag gccctcgtcc agcacgcgct ggtggcggcc atcggcggtc
      841 agcagggcca gcagctcgcc ggcggtggcg gcggcattcc actgccgcag ctgttgcacc
      901 acgaaaccgt gcagctgccg gcgcacggca gcctcgtcga agaaatccag tgcctgcaac
      961 gcccagccgc gcgccatgtc ggccagcatc cgcgaacgcg ccggatcggc cagccagctg
     1021 cccaggcggc tggcgggatc gaacacctgc agcttggcca acagcacgcc cggttccagg
     1081 aactggtcgc gcacgaacag cgccaggctg tcaccgatgc gttccttgct gcgcgggatg
     1141 atcgcggtgt gcggaatggg cagtcccatc ggccgccgga acagcgcgac gacggcgaac
     1201 cagtcggcca gcgcacccac ggcggcggcc tcgcagaacg ccgagaccca ggcccagatg
     1261 ccacgttcgc cctgccagtg gctgacggcg aatccggcca gcatcaacag cagcaggccc
     1321 agtgcgaggg ctttcaggcg ccgcagctgt gcgcggcgcg gatcgttggc aggcgtcatg
     1381 cccgaagtct atccggccc
//
LOCUS       DAOKIP010000390         1364 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.399,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000390 DAOKIP010000000
VERSION     DAOKIP010000390.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 1364)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1364)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1364
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.399"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..>1364)
                     /locus_tag="QEL58_004016"
     CDS             complement(<1..>1364)
                     /locus_tag="QEL58_004016"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1678440.1"
                     /translation="LAGNNVSVFGRDGVRLGADLRSSGSLTLASSNADIVQVAVPNGV
                     GGSVQSVGAVQVDAGSGRIALDNAGNRFGGALNLSGGDINVTGDTLLLGNVAASGQLS
                     LASAGDIRQQGAAQVGGTTRLSAGGDIDLQAGGNRFGDAVTVQGRQVALASDGPLQLQ
                     GVTAGSLVARSGDRLTLGAADVTGNVTLDGASLLLEGASIGGALVATARAGAINQGSG
                     SLAIGNNSQLTAGTDIVLGGTGNQLGSALQVQGRDITLSSNTALDLQNLQATRDVLLS
                     GNGVRLGATSVQGALQVNSAAAITQSDALQVTGNSRFQAGSDISLDQAGNRFDGSVAL
                     QGGNIAITARDGLLLDSVSARGNLDARAGLGGVSQQAALEVGGRSDVRTQGAIALDRA
                     DNRFTGAVGLDGNGVDLRAAGDLQVDRLNNGGQSDVRLHAGGGLQLPAIDAGAGNLTL
                     LADG"
BASE COUNT          197 a          502 c          450 g          215 t
ORIGIN      
        1 gccatcggcg agcagggtca ggttgccggc accggcatcg atggccggca gctgcaggcc
       61 tcccccggcg tgcaggcgca catcggactg gccgccgttg ttcaggcgat cgacctgcag
      121 atcgcccgct gcgcgtagat cgacaccgtt gccgtccagc ccgaccgcac ccgtgaaacg
      181 gttgtcggca cggtccagtg caatggcgcc ctgcgtgcgc acgtcgctgc gtccgccgac
      241 ttcgagcgcc gcctgctggg agacaccgcc caggcccgcg cgcgcatcca ggttgccgcg
      301 ggcggacacg ctgtcgagca gcaggccgtc acgggcggtg atggcaatgt tgccgccctg
      361 cagggcgacg ctgccatcga agcgattgcc ggcctggtca aggctgatgt ccgaaccggc
      421 ctggaagcgg ctgttgcccg tcacctgcag cgcgtcggac tgggtgatcg cagcggcgct
      481 gttgacctgc aatgcgccct gcaccgaggt tgcaccgagc cgcacgccgt tgccgctgag
      541 cagcacgtca cgcgtggcct gcaggttctg caggtccagg gccgtgttgc tggacagggt
      601 gatgtcgcgg ccctgcacct gcaaggcact gcccagttga ttgccggttc cgcccagcac
      661 gatatcggtg ccggcggtca gctggctgtt gttgccgatc gccaggctgc cactcccctg
      721 gttgatggca cctgcgcgtg cggtcgccac cagtgcacca ccgatgctgg ctccctccag
      781 cagcagcgag gcgccatcga gcgtgacatt gcccgtgacg tcggcggcgc ccagggtcaa
      841 acggtcacca ctgcgtgcaa ccaggctgcc cgccgtcacg ccctgcagct gcagcgggcc
      901 atcgctggcc agtgccacct gccggccctg caccgtgacc gcatctccga agcggttgcc
      961 accggcctgc aggtcgatgt caccgccagc gctcagccgg gtcgtgcctc ctacctgcgc
     1021 agcaccctgc tggcggatgt cgccggcact ggccagcgac agctggccgc tcgcggccac
     1081 attgcccagc agcagcgtat cgccggttac gttgatgtca ccgccggaca ggttgagcgc
     1141 gccgccgaaa cggttgccgg cattgtccag cgcgatgcgc ccgctgcctg catcaacctg
     1201 cactgcgccg accgactgca cgctgccacc cacgccattg ggcacggcga cctgcacgat
     1261 gtccgcgttg ctgctggcca gggtcagcga accgctgctg cgcagatcgg cccccaggcg
     1321 cacgccatcg cggccgaaca cgctcacgtt gttgccggcc agca
//
LOCUS       DAOKIP010000391         1346 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.400,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000391 DAOKIP010000000
VERSION     DAOKIP010000391.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 1346)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1346)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1346
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.400"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(31..1170)
                     /locus_tag="QEL58_004017"
     CDS             complement(31..1170)
                     /locus_tag="QEL58_004017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005415424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel family protein"
                     /protein_id="HDS1678441.1"
                     /translation="MHWESAQAYAWPLGAAVLVGGIGAWLILWIYHRLKGRDRRRARI
                     GRVLGLPMATAWPLLLLIPALQATPLQDPLLGNLQHVLHIALTACFIWLLVRAVAAGE
                     RAILRSHPIDVSDNLEARRIQTQTRVLSRVLMGGIIVLGASLVLLTFPMVQKIGTALL
                     ASAGLIGLVAGIAAKPVFGNLIAGLQIAVTQPIRLDDVVIVEGEWGRIEEIGSSYVVV
                     RIWDERRMVVPLTWFIENPFQNWTRRSADLLGTAFLWLDYRAPIAAIRNELERICRGE
                     ALWDGRVCVTQVTETSERAIQVRLLVSARSSGDAFDLRCLVRERMLDFLAREHPQSLP
                     QVRARVQHDDELDMPRGPRTRTADVRSPGAEDGEAAIVPVESPDR"
BASE COUNT          248 a          495 c          413 g          190 t
ORIGIN      
        1 catcccgcag atgccggcca gcgcccggca ctaccggtcc ggggattcca ccggcacgat
       61 cgccgcctcg ccatcctccg cgcccggcga ccgcacatcc gcagtccgcg tacgcggtcc
      121 ccgtggcatg tccagctcat catcgtgctg cacacgtgcg cgcacctgcg gcaacgactg
      181 cgggtgttcg cgcgcgagga aatcgagcat gcgttcgcgc accaggcagc gcaggtcgaa
      241 ggcatcgccg gagctgcgcg cgctgaccag cagccgcacc tggatcgcac gctcgctggt
      301 ctcggtcacc tgggtcacgc agacccggcc atcccacagc gcttcaccgc ggcagatccg
      361 ctccagctcg ttacggatcg ccgcgatcgg agcgcgatag tccagccaca ggaaggccgt
      421 gcccagcaga tcggcgctgc gccgtgtcca gttctggaac gggttctcga tgaaccaggt
      481 cagcggcacc accatccgcc gctcatccca gatgcgtacc accacatagc tgctgccgat
      541 ctcctcgatg cggccccatt cgccttcaac gatcaccacg tcgtccagcc ggatcggctg
      601 cgtcaccgcg atctgcaggc cggcgatcag gttgccgaac accggcttgg ccgcgatacc
      661 ggcaaccaga ccgatcaggc cggccgatgc cagcaaagca gtgccgatct tctgcaccat
      721 cgggaacgtg agcagcacca gcgatgcccc cagcacgatg atgccgccca tcagcacgcg
      781 gctgagcacc cgggtctggg tctggatgcg gcgggcttcg aggttgtcgg aaacatcgat
      841 ggggtgactg cgcaggatcg cgcgctcgcc cgcggccacc gcccgcacca gcaaccagat
      901 gaagcacgcg gtcagcgcga tgtgcagcac gtgctgcagg ttgcccagca gcggatcctg
      961 cagcggcgtc gcctgcagcg cgggaatcaa cagcagcagc ggccaggcgg tggccatcgg
     1021 cagcccgagc acgcgaccga tgcgcgcacg ccgccgatcg cgtcctttca accggtggta
     1081 gatccacagg atcaaccacg cgccgatgcc ccccaccagc accgccgccc ccaacggcca
     1141 tgcataggcc tgtgcgcttt cccagtgcac ggtcgccacc tccactcgaa cagcaagcgg
     1201 acagcctcgc gcatggcgca tgagcgtcac gtcagtcgtt cgtaaggagg gtgttgatcg
     1261 gcagggcttg cagccctgca cctgctgcga gctggagcaa cagcaacagc cgaagcacaa
     1321 gcaacagcag aggctggcat tccgtg
//
LOCUS       DAOKIP010000392         1299 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.401,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000392 DAOKIP010000000
VERSION     DAOKIP010000392.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 1299)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1299)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1299
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.401"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(48..1292)
                     /locus_tag="QEL58_004018"
     CDS             complement(48..1292)
                     /locus_tag="QEL58_004018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005415680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF819 family protein"
                     /protein_id="HDS1678442.1"
                     /translation="MPSTALIQNDIVVFGLIAATLGAVFWTASREQGLWKRFYTFVPA
                     LLLCYLIPGIYNTVGLIDGQNTKLYNPIARDILLPAALILLTLAVDIKGILRLGPKLV
                     LMYLGASASIMLGAVVAFLVMRAIHPDTVAGDTWAGMAALAGSWIGGGANMLAMREVF
                     DVNATTFGQFAVVDVGVGYVWMAALIFLAGRAAKIDARSGADTSAIDELKERIARFQA
                     EHERIPSLTDLMLIVAVAFGGVGLAHAIGAPLAAWFKINVSWAAQFSLDAPFVWVVVL
                     STTLGLGLSFTRARTLEGAGASRLGSLLLYFLIACIGMQMDLLALLDRPWLFLLGLIW
                     IAVHIVLLWCLGKLLKVPFFYFAIGSQSNIGGPASAPVVAAAFHPALAPVGVLLGTMG
                     YATGTYLAYVVGITLRALAGQG"
BASE COUNT          259 a          440 c          432 g          168 t
ORIGIN      
        1 ctgtgaagca tcgcctggct gccggccagt ggccggcact accggaatca cccctgcccg
       61 gccagcgcgc gcagagtgat gccgacgacg taggccagat aggtgccggt ggcgtagccc
      121 atcgtcccca gcagcacgcc gaccggcgcc agggccggat ggaacgccgc cgccaccacc
      181 ggcgccgagg cagggccacc gatgttcgac tgcgaaccga tggcgaagta gaagaacggc
      241 accttcagca gcttgcccag gcaccacagc agcacgatgt gcacggcgat ccagatcagg
      301 cccagcagga acagccacgg gcggtccagc agcgccagca gatccatctg catgccgatg
      361 caggcgatca ggaaatacag cagcagcgaa cccaggcgcg aggcgcccgc gccttccagg
      421 gtgcgcgcac gggtgaaact gaggcccagg cccagcgtgg tcgacagcac caccacccac
      481 acgaatggcg catccaggct gaactgtgcg gcccagctga cgttgatctt gaaccatgcg
      541 gccagcggcg caccgatggc atgcgccagg ccgacgccac cgaaggccac cgccacgatc
      601 agcatcaggt cggtgaggct gggaatgcgc tcgtgctcgg cctggaagcg cgcgatgcgc
      661 tccttcaact cgtcgatggc cgaggtatcg gcgccactgc gtgcatcaat ctttgccgcg
      721 cggccggcca ggaagatcag cgccgccatc cacacgtagc cgacgccgac atccaccacc
      781 gcaaactggc cgaaggtggt ggcgttgacg tcgaacactt cgcgcatcgc cagcatgttg
      841 gcaccgccgc cgatccagct gccggccagc gcagccatgc cggcccaggt atcgccggcc
      901 acggtgtcgg gatggatcgc gcgcatcacc aggaaggcca ccaccgcgcc gagcatgatg
      961 ctggccgaag cgcccaggta catcagcacc agcttcgggc caagccgcag gatgcccttg
     1021 atgtccaccg ccagggtcag caggatcagc gccgccggca gcaggatgtc gcgcgcgatc
     1081 gggttgtaga gcttggtgtt ctgcccgtcg atcaggccga cggtgttgta gatgccggga
     1141 atcaggtagc acagcagcag tgccggcacg aaggtgtaga agcgtttcca caggccctgc
     1201 tcgcgcgagg cggtccagaa cacggcgccg agggtggcgg cgatcaaacc gaagacgacg
     1261 atgtcgttct ggatcagggc ggtcgagggc atgcaggcg
//
LOCUS       DAOKIP010000393         1297 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.402,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000393 DAOKIP010000000
VERSION     DAOKIP010000393.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 1297)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1297)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1297
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.402"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..730)
                     /locus_tag="QEL58_004019"
     CDS             complement(<1..730)
                     /locus_tag="QEL58_004019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005414496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="20S proteasome subunit A/B"
                     /protein_id="HDS1678443.1"
                     /translation="MTYCVGIEVDEGLVFAADTRTNASLDDVRVHRKLHVFEYPGQAA
                     YVLMAAGNLATTQLLVSRLGRDAGERRTPNLRDMAHLFEAAEYVGQLLVDSQVHSSHS
                     EHGHDGVNTQATLIFGGQIAGERPGLYMIYPLGNAIAASPETPYLQIGESKYGKPILD
                     RILSPATRLEDAARTAIVSLDSTIRSNLSVGLPIDLALLRDGELRIGQQLRLGADSAL
                     YADIHQNWSRRLEQAVDSLPRFPWE"
     gene            822..>1297
                     /gene="folK"
                     /locus_tag="QEL58_004020"
     CDS             822..>1297
                     /gene="folK"
                     /locus_tag="QEL58_004020"
                     /EC_number="2.7.6.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012481279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-amino-4-hydroxy-6-
                     hydroxymethyldihydropteridine diphosphokinase"
                     /protein_id="HDS1678444.1"
                     /translation="MTTVLLSLGSNVQPRRYLHAAVTALRERFGALQVSPAYRTAAVG
                     FDGPAFLNNAVAIETGLPLQELDDWLHALEDAHGRDRSGPRFSDRTLDIDVVFYGDLV
                     VEGPGHLRIPRPELKHAFVLKPLADIAPDFIDPVSGQDLAALWRAHPQFGEAFEVV"
BASE COUNT          193 a          439 c          443 g          222 t
ORIGIN      
        1 tttcccacgg gaaccgcggc aggctgtcca ccgcctgttc cagccgccgc gaccagttct
       61 ggtggatgtc ggcatacagc gccgaatccg cgcccagccg cagctgctgg ccgatgcgca
      121 gctcgccatc gcgcagcagt gccaggtcga tcggcaggcc caccgacagg ttggagcgga
      181 tggtcgaatc gagcgagacg atcgccgtgc gcgccgcgtc ttccaggcgg gtggccgggc
      241 tgaggatgcg gtcgaggatc ggcttgccgt atttggattc gccgatctgc aggtagggcg
      301 tctccggcga ggcggcaatg gcattgccca gcggatagat catgtacagc cccggccgct
      361 cgccggcgat ctggccgccg aagatcagcg tggcctgggt gttgaccccg tcatggccgt
      421 gctcgctgtg gctgctgtgc acctggctgt cgaccagcag ctggccgacg tactcggcgg
      481 cctcgaaaag atgggccatg tcgcgcaggt tgggcgtgcg tcgttcgccg gcatcgcgcc
      541 ccagccgtga caccagcagc tgggtggtgg ccaggttgcc cgccgccatc agcacgtagg
      601 ctgcctggcc gggatactcg aacacgtgca gcttgcgatg cacgcgcaca tcgtccagcg
      661 aggcattggt ccgggtatcg gcggcgaaga ccaggccctc gtcgacctcg attccaacgc
      721 aataggtcat gtcggtgccc tatcatgtgc gtcccggatt gtaggcaggc cgccgtgacg
      781 acggcatgtc cacgcccccc aagtgccgtc acctgaaccg catgaccacc gtgctcctga
      841 gcctgggcag caacgtccag ccccgccgct acctccacgc cgcggtgacg gccctgcgcg
      901 agcgcttcgg cgcgctgcag gtgtcgcccg cctaccgtac cgccgcggtt ggcttcgatg
      961 gcccggcctt cctcaacaac gcagtggcga tcgagaccgg cctgccgctg caggagctgg
     1021 atgactggct gcatgcgctg gaagacgcgc atggccgtga tcgcagcggg ccgcgctttt
     1081 ccgaccggac cctggacatc gacgtggtgt tctatggcga cctggtggtg gaaggccccg
     1141 gccacctgcg cattccgcgc ccggaactga agcatgcctt cgtgctgaag ccgctggccg
     1201 acatcgcgcc ggatttcatc gatccggtca gcgggcagga cctggctgcg ctgtggcgcg
     1261 cgcacccgca gttcggcgag gcgttcgagg tggttga
//
LOCUS       DAOKIP010000394         1293 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.403,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000394 DAOKIP010000000
VERSION     DAOKIP010000394.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 1293)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1293)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1293
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.403"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..773)
                     /locus_tag="QEL58_004021"
     CDS             complement(<1..773)
                     /locus_tag="QEL58_004021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014646368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HDS1678445.1"
                     /translation="MTTLIEVINHGPIRELRLARPPVNALDTELCRQLIHAIELAMAE
                     DAHGIVLSGSERIFTGGMDVPHLLSHGDDKHKLLDTWNAFFGAVRTLAESRIPVVAAI
                     TGHAPAGGCVLALCCDYRVMARSAEPSRPYAIGLNEVQVGLIAPEGIQRLLRRAVGVH
                     RAGVLLTTGSLVPAEQALQIGLVDELAEGDLVVARAVAWLQNLLKQPRQPMLLTRAVA
                     RADLHEALHPDLIQLDRFVEAWFAPDAQNALQALVARLG"
     gene            808..1254
                     /locus_tag="QEL58_004022"
     CDS             808..1254
                     /locus_tag="QEL58_004022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005412625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper chaperone PCu(A)C"
                     /protein_id="HDS1678446.1"
                     /translation="MITKPFVGVLLMMCAAAASASAAETTCVTVEQGWARLPPNPAMP
                     MTAGYGVIHNGCRKAVAITGASSSGFGDVSLHETTITDGVSRMRAIERLPLAPGARAE
                     LKPGGLHLMLMQGKGALKDGQALPLRLQLEGGGEASATLVVRKAAP"
BASE COUNT          208 a          424 c          469 g          192 t
ORIGIN      
        1 ttgcccagac gtgccaccag cgcctgcagg gcgttctgtg catccggggc gaaccaggct
       61 tcgacgaagc ggtccagctg gatcaggtcc gggtgcaggg cttcgtgcag gtcggcgcgg
      121 gcaacggcgc gggtcagcag catcggctgg cgcggctgct tgagcaggtt ctgcagccag
      181 gccacggcac gcgccaccac caggtcacct tcggccagtt catcgaccag gccaatctgc
      241 agcgcctgct cggccggcac cagtgaaccg gtggtcagca ggaccccggc gcggtgcacg
      301 cccaccgcgc ggcgcagcag gcgctggatg ccctccggtg cgatcagtcc cacctgcact
      361 tcgttcaggc cgatggcata cgggcgcgac ggctcggcgc tgcgcgccat cacccggtag
      421 tcgcagcaca gcgccagcac gcagccgccg gccggggcgt ggccggtgat cgcggccacc
      481 accgggatgc ggctctcggc cagcgtgcgc accgcgccaa agaaggcgtt ccaggtgtcc
      541 agcagcttgt gcttgtcatc gccgtgcgag agcaggtgcg gcacgtccat gccaccggtg
      601 aagatgcgtt cgctgcccga cagcacgatg ccgtgcgcat cttcggccat ggccagctcg
      661 atggcgtgga tcaactgccg gcacagttcg gtgtccagtg cgttgaccgg cggccgcgcc
      721 aggcgcagtt cgcggatggg gccatggttg atcacctcga tgagcgtcgt catgctgcgg
      781 tctcgttgcg aagaaggaac ctgggcgatg ataaccaaac cattcgttgg cgtattgttg
      841 atgatgtgtg cggccgcagc atcggcatcc gccgccgaga cgacgtgcgt caccgtcgag
      901 cagggctggg cgcggctgcc gccgaatccg gcgatgccga tgaccgccgg ctacggcgtg
      961 atccacaacg gctgccgcaa ggcggtggcg atcactggcg cgagcagcag cggtttcggc
     1021 gatgtgtcgc tgcacgagac cacgatcact gacggggtca gccgcatgcg cgcgatcgag
     1081 cgcctgccgc tggcaccggg cgcccgtgcc gaactcaagc ccggcggcct gcacctgatg
     1141 ctgatgcagg gcaagggcgc attgaaggac gggcaggcgc tgccactgcg gctgcagctg
     1201 gaaggcggtg gcgaagcgag cgcgacgttg gtggtgcgca aggccgcgcc gtaagcgcgc
     1261 ggggaaacgg cacgctgctg ctgaagcaag ggg
//
LOCUS       DAOKIP010000395         1263 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.404,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000395 DAOKIP010000000
VERSION     DAOKIP010000395.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 1263)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1263)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1263
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.404"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            41..1261
                     /locus_tag="QEL58_004023"
     CDS             41..1261
                     /locus_tag="QEL58_004023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019337422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component sensor histidine kinase"
                     /protein_id="HDS1678447.1"
                     /translation="MSAANALVTAPLPPQPVLQALLERLREGLLLFTEDGQVALANPA
                     AQNLLANGEDGALPPPQRLRELLPPDALEQARQHGHWNGSLPLGEGVVIAHLYHHGPV
                     GEGHFLALFRHIEGQEDYERELQQRHAELRQAYLRLNGTQEKLLQSEKMASIGQLAAG
                     VAHEINNPIGYVHSNLGSLQEYLRSLFTVIEAYERALRAPDPKALIPEIDDIRDRLDI
                     DFISRDLPQLMAESREGIERVTRIVRDLKDFSYSGRDESWKLVDLHAGLESTINIIWN
                     ELKYKVTLVREFGQLPLVECLPSELNQVYMNLLLNAGHAIAERGTITVRTGVDGDHVW
                     VEFEDTGGGISPELRQRIFDPFFTTKPVGSGTGLGLSISYSIINKHHGRIDLDSTPGV
                     GSRFRVVLPVKQPR"
BASE COUNT          224 a          435 c          401 g          203 t
ORIGIN      
        1 ccgcgtatat tgggcgcctg ttcgaacgcc ccgagttgcc gtgtccgctg ccaacgccct
       61 ggttaccgcc ccccttccgc cgcagccggt gctgcaggcg ctgcttgagc gcctgcgcga
      121 aggcctgctg ctgttcaccg aagacgggca ggtggccctg gccaatccgg ccgcgcagaa
      181 cctgctggcc aacggcgaag acggcgcatt gccgccgccg cagcgcctgc gtgaactgtt
      241 gccgcccgac gcgctggagc aggcgcgcca gcatggtcac tggaacggca gcctgccgct
      301 gggcgagggc gtggtcatcg cccacctgta ccaccacggc ccggttggcg aagggcactt
      361 cctggccctg ttccgccaca tcgaagggca ggaagactac gaacgcgaac tgcagcagcg
      421 ccacgccgaa ctgcgccagg cctacctgcg cctcaacggc acccaggaaa agctgctgca
      481 gtcggagaag atggcgtcga tcggccagct cgccgcgggt gtggcgcacg agatcaacaa
      541 cccgatcggt tacgtgcact ccaacctggg cagcctgcag gaatacctgc gcagcctgtt
      601 caccgtgatc gaggcctacg agcgcgccct gcgtgcgccg gatccgaagg cgttgattcc
      661 ggagatcgac gatatccgtg accgcctcga catcgatttc atcagccgcg acctgccgca
      721 gctgatggcc gagtcgcgcg agggcatcga gcgggtcacc cgcatcgtgc gcgacctgaa
      781 ggacttctct tactccggtc gcgatgagtc gtggaagctg gtcgacctgc acgcgggcct
      841 ggaatcgacc atcaacatca tctggaacga gctcaagtac aaggtcaccc tggtgcgcga
      901 gttcggccag ttgccgctgg tggagtgctt gccgtcggaa ctgaaccagg tctacatgaa
      961 cctgctgctc aacgccggcc acgccatcgc cgagcgcggc accatcaccg tgcgtaccgg
     1021 cgtcgatggc gatcatgtgt gggtcgagtt cgaagacacc ggcggcggca tctcgccgga
     1081 actgcgccag cgcatcttcg atccgttctt caccaccaaa ccggtgggca gcggcaccgg
     1141 gctgggcctg tcgatctcct acagcatcat caacaagcac cacggccgca tcgacctgga
     1201 cagtaccccg ggcgtcggct cgcgcttccg cgtggtgctg ccggtgaagc agccgcgata
     1261 agg
//
LOCUS       DAOKIP010000396         1256 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.405,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000396 DAOKIP010000000
VERSION     DAOKIP010000396.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 1256)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1256)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1256
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.405"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            68..>1256
                     /locus_tag="QEL58_004024"
     CDS             68..>1256
                     /locus_tag="QEL58_004024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014648468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HDS1678448.1"
                     /translation="MSTLPHTPGYSRRSHEIAPFHVMSLLARAQALEQAGHDVIHLEI
                     GEPDFTTAEPVVRAGQAALAAGHTRYTAARGLPALRQAISGFYRSHYALDIDPERILV
                     TPGGSGALLLASSLLVDPGRHWLLADPGYPCNRHFLRLVEGGAQLVPVGPDTTYQLTP
                     SLVEQHWNADSVGALVASPANPTGTVLSADELAALSQSLHARGGHLVVDEIYHGLTYG
                     LDAPSVLQVDDSAFVLNSFSKYFGMTGWRLGWLVAPPAAVPDLEKLAQNLYISASSIA
                     QHAALACFSEESMAIFEQRREAFRQRRDFLLPALRELGFRIEVEPQGAFYLYADVSAF
                     TDDAQAFCAHFLETEHVAFTPGLDFGFHRANQHVRLAYTQEVPRLQEAVARIARGLKR
                     WQGS"
BASE COUNT          197 a          444 c          404 g          211 t
ORIGIN      
        1 acagttcatc ccgacgttgc cggccagcgg ccggcattac ccccggcgcg cggcgtacca
       61 tgggtgcatg agtaccctgc cccacacgcc gggctacagc cggcgcagcc atgaaatcgc
      121 cccgttccac gtgatgtccc tgctggcccg cgcgcaggcg ctggaacagg ccggccacga
      181 tgtgatccat ctggagatcg gcgaaccgga cttcaccacc gccgaacccg tggtgcgcgc
      241 cggccaggcc gcgttggcgg ccggccacac ccgctacacc gccgcacgcg gcctgccagc
      301 cctgcgccag gcgatcagcg gcttctatcg cagccactac gcgctggata tcgaccccga
      361 gcgcatcctg gtcaccccgg gtggttccgg tgcgctgctg ctggccagca gcctgctggt
      421 cgatcccggc cgccactggc tgctggccga cccgggctat ccctgcaacc gccatttcct
      481 gcgcctggtc gaaggcggcg cacagctggt gccggtcggg ccggatacca cctatcagct
      541 gaccccttcg ctggtggaac agcactggaa tgccgacagt gtcggcgcgc tggttgcctc
      601 accagccaat ccgaccggca ccgtgctgtc cgctgatgaa ctggcggcac tgtcgcagag
      661 cctgcacgca cgcggtggcc acctggtggt ggacgagatc taccacggcc tgacctacgg
      721 cctggacgcg cccagcgtgc tgcaggtgga cgacagcgcg ttcgtgctga acagcttctc
      781 caagtacttc ggcatgaccg gctggcggct gggttggctg gtggcaccgc ctgcggccgt
      841 gcctgatctg gagaagcttg cccagaacct gtacatcagc gcgtcgagca ttgcccagca
      901 tgcagcgctg gcctgcttca gcgaggaatc gatggcgatc ttcgagcagc gccgcgaagc
      961 gttccgccag cgccgtgact tcctgctgcc cgcgttgcgc gaactgggct tccgcatcga
     1021 agtcgaaccg cagggcgcgt tctacctgta tgccgatgtc agcgcgttca ccgacgacgc
     1081 gcaggcgttc tgtgcccact tcctggaaac cgagcacgtg gcgttcaccc cgggcctgga
     1141 tttcggcttc catcgcgcca accagcacgt gcgcctggcg tacacgcagg aagtgccgcg
     1201 attgcaggaa gcggtggcac ggattgcgcg tgggttgaag cgttggcaag gatcac
//
LOCUS       DAOKIP010000397         1245 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.406,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000397 DAOKIP010000000
VERSION     DAOKIP010000397.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 1245)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1245)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1245
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.406"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            80..>1245
                     /locus_tag="QEL58_004025"
     CDS             80..>1245
                     /locus_tag="QEL58_004025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000343613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS256 family transposase"
                     /protein_id="HDS1678449.1"
                     /translation="MNEQKLKDLAAEFAKGIKTEDDLNQFTRLLTKLTVETALNAELT
                     EHLGHEKNARKNGSNARNGYSSKTVLSDDGEIEITTPRDRDGTFEPQLIKKNQTRITQ
                     MDSQILSLYAKGMTTREIVATFKEMYDADVSPTLISKVTDAVKEQVAEWQNRPLDALY
                     PIVYMDCIVVKVRHNGSVINKAVFLALGINLDGQKELLGMWMAENEGAKFWLNVLTEL
                     KNRGLQDILIACVDGLKGFPDAINSVYPQTHIQLCIIHMLRNSLKYVSWKDYKAVTQD
                     LKAVYQSPTEEAALMALDQFAQTWDDKYPQISKSWRTHWENLNTFFAYPAEIRKAIYT
                     TNAIESLNSVIRQAIKKRKVFPTDDSVRKVIYLAIDAASKKWNMPIRDWRLAMSR"
BASE COUNT          390 a          271 c          273 g          311 t
ORIGIN      
        1 ataaatagag actgtaaatt aaattgtgta attgcctgaa tttgctatgt tcatattcac
       61 aacggagtca ggcaacatga tgaacgaaca aaaactaaaa gaccttgcag cagaatttgc
      121 taaaggaatc aaaacagaag acgatctcaa tcaattcacc cgattgttga ctaaactcac
      181 tgttgaaacg gctctcaatg ccgaacttac cgaacatctc ggacatgaaa agaatgctcg
      241 taagaacggt tcaaatgctc gtaacggtta ttccagtaag accgtgctga gcgatgatgg
      301 tgagattgag atcaccacac cacgagatcg tgatggcaca tttgagccac agctaattaa
      361 aaagaatcag actcgtatca cgcaaatgga tagccaaatt ctatcccttt atgccaaagg
      421 catgactacc cgtgaaatcg tggctacttt caaagaaatg tacgatgctg atgtatcgcc
      481 aacgcttatt tccaaggtga ctgatgctgt taaggagcaa gtcgctgaat ggcaaaaccg
      541 tccgctggat gcactctatc ccatcgtcta tatggactgt attgtagtta aagtccgtca
      601 taatggcagt gttatcaaca aggctgtatt ccttgcctta ggcattaatc ttgatggaca
      661 gaaagaactg ctcggcatgt ggatggctga gaatgaaggt gcaaagttct ggctgaatgt
      721 cctgactgag cttaaaaacc gagggttgca ggatattctg atcgcctgtg tggatggact
      781 aaaaggcttt cctgatgcca ttaacagcgt atacccgcaa acccatatcc agctgtgcat
      841 tatccatatg ctgcgtaaca gcttgaaata cgtatcatgg aaagattaca aggccgtcac
      901 tcaggattta aaagccgttt atcagtcacc tactgaagag gcagccttga tggccttgga
      961 tcaattcgcc caaacatggg atgacaagta cccacagatc agcaaaagct ggcgtacaca
     1021 ctgggagaat ctaaatacct tctttgctta tccagccgag atacgcaaag ccatctatac
     1081 caccaatgcg atcgaatcat taaacagcgt aatacgtcag gcgatcaaaa agcgtaaagt
     1141 ctttccaacg gatgattctg tacgtaaagt gatttacctg gcaattgatg cagcgtctaa
     1201 aaagtggaat atgcctattc gcgactggcg tttagccatg agccg
//
LOCUS       DAOKIP010000398         1244 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.407,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000398 DAOKIP010000000
VERSION     DAOKIP010000398.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 1244)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1244)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1244
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.407"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            194..457
                     /locus_tag="QEL58_004026"
     CDS             194..457
                     /locus_tag="QEL58_004026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014646000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2007 domain-containing protein"
                     /protein_id="HDS1678450.1"
                     /translation="MHIVYKADNLFDAHLVKHALEDAGIPAFVFGEQLLGGMGELPLF
                     GVLRVGIPDAARPQAEDIVASLDLGHAPDDPISDADDIAGLPA"
     gene            488..1153
                     /gene="msrA"
                     /locus_tag="QEL58_004027"
     CDS             488..1153
                     /gene="msrA"
                     /locus_tag="QEL58_004027"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014089456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HDS1678451.1"
                     /translation="MLGIGAFKQRLPRPEEALPGREQPLPLHSNQHFVNSHPLKDRFT
                     GLQQIRFALGCFWGAERKFWTEPGVYSTSVGYAGGITPNPTYEEVCSGLTGHTEVVQV
                     VFDPAVVSLERLLQLFWESHDPTQGMRQGNDTGTQYRSAIHATDEAQYAAALASREAY
                     QAQLDAAGYGPITTEIVYPAPTYYYAEDYHQQYLAKNPNGYCGIGGTGVSCPIGLDVE
                     GPR"
BASE COUNT          216 a          409 c          427 g          192 t
ORIGIN      
        1 atgagtctgg ggcgaaaaag ggcagaaaga ccaacagtct agcgcgtacg gcgcagggct
       61 gcccggcagc gcctgggttg ccggccagcg gccggcaccc tccatccacc ttccggcgga
      121 atggtcatgc gccgccaccg ccaccattca gcgcccgggc gtatgctgga cccctgcccc
      181 aaggagccgt cgcatgcaca tcgtgtacaa ggccgacaac ctgttcgacg cccacctggt
      241 caagcacgcg ctggaagacg ccggcatccc cgccttcgtg tttggcgagc agctgctggg
      301 tggcatgggc gagctgccat tgttcggcgt actgcgggtc ggcatcccgg atgcggcgcg
      361 gccgcaggcc gaggacatcg tggcctcgct ggacttgggc cacgcgccgg acgaccccat
      421 ttcagatgca gacgacattg ccggccttcc ggcgtaggag cgcatcatgt tgggaattgg
      481 ccagggcatc ctcggcatcg gggccttcaa gcagcgcctg ccgcgcccgg aagaagcgct
      541 gccggggcgc gagcagccgc tgccgctgca tagcaaccag cacttcgtga acagtcatcc
      601 gctgaaggac cgttttaccg gcctgcagca gatccgcttc gcgctgggct gcttctgggg
      661 cgccgaacgc aagttctgga ccgagccggg cgtgtacagc acctcggtcg gctatgccgg
      721 tggtatcacc ccgaacccga cctatgaaga ggtgtgttcg ggcctgaccg gccacaccga
      781 agtggtgcag gtggtgttcg acccggcggt ggtgagcctg gagcggctgc tgcagctgtt
      841 ctgggaaagc cacgacccga cccagggcat gcgccagggc aacgacaccg gcacccagta
      901 ccgctcggcg atccacgcca ccgacgaggc ccagtacgcc gccgcgctgg ccagccgcga
      961 ggcctaccaa gcgcagctgg atgcggccgg ttacggcccg atcaccaccg agatcgtgta
     1021 cccggcaccg acgtactact acgccgagga ttatcaccag cagtatctgg cgaagaatcc
     1081 gaacggttac tgcggcattg gtggcacggg cgtgagctgc ccgatcgggc tggatgtgga
     1141 ggggccgcgc tgacgcgcgg tggtccgcct gcggcgggca acatcaacat ccaaagcggc
     1201 tctgggttgc tgatggtttg gcgggacggg ggcggctggc agga
//
LOCUS       DAOKIP010000399         1221 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.408,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000399 DAOKIP010000000
VERSION     DAOKIP010000399.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 1221)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1221)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1221
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.408"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..201)
                     /locus_tag="QEL58_004028"
     CDS             complement(<1..201)
                     /locus_tag="QEL58_004028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008268305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1678452.1"
                     /translation="MDLNDDVVSGWLNGSDDVDGCANPAGSLFIYGAAATESALTSAS
                     DTLITGGGTECTTTMSVVNHCLC"
     gene            complement(483..>1221)
                     /locus_tag="QEL58_004029"
     CDS             complement(483..>1221)
                     /locus_tag="QEL58_004029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HDS1678453.1"
                     /translation="ALAIGFERFEQLLEGAAQMDAHALDAPLERNLPVLHGLTDIWNR
                     NLLGCATHAVMTYDQRLALLPAYLQQLVMESLGKRVQRDGQPVTTDTVPVWWGGAGTD
                     VQHSFFQALHQGTSIVPADFIGCVHNDDPYTINHQALLANLLAQTEALANGQGSDDPH
                     RDYPGGRPSTLILLDALTPQALGALISMYEHAVYVQSVIWNINAFDQFGVELGKQLAS
                     GLLPALQGEDVAIADPMTREILAQLKR"
BASE COUNT          220 a          400 c          395 g          206 t
ORIGIN      
        1 gcacaggcag tgattgacca ccgacatcgt ggtggtgcac tcggtaccac caccggtgat
       61 cagggtgtcg gaggccgacg tgagcgcgga ctcggtggcc gcagcgccat agatgaacag
      121 cgaaccggcg gggttggcac acccatccac atcgtccgag ccgttgagcc agccggacac
      181 aacatcgtca ttcagatcca ttcgcaatct cctgtcattc acaacatgag gcgttgagaa
      241 cgtggatcga ttccacgttc cttcggatac ggccagtccc tggcatcaac ttcatgctgc
      301 gagcgatact ggatgacagg tactgccgcc cgtgcacact gcatcggcat tcgatgcggc
      361 gtcaagctgc gctgcggcag gcacgcggat gcacggcacg cgcaacacgg aagggcgcgt
      421 gcatggccgg gatgtgagat gcggggatgg ccggccggtg gccggcgcct ccagggacag
      481 gctcagcgct tcagctgcgc aagaatctcg cgggtcatcg gatcggcgat cgccacgtcc
      541 tcaccctgca acgccggcag caggccactg gccagctgct tgcccagctc gacaccgaac
      601 tggtcgaagg cgttgatgtt ccagatcacc gattgcacgt acacggcgtg ctcgtacatc
      661 gagatcagcg cacccaatgc ctgcggggta agtgcatcaa gcaggatcag cgtgctcgga
      721 cggccgcccg ggtaatcgcg gtgcgggtcg tcgctgccct ggccattggc cagcgcctcg
      781 gtctgcgcca gcaggttggc cagcagggcc tgatgattga tcgtgtaggg atcatcgtta
      841 tgcacgcagc cgatgaaatc ggccggcacg atgctggtgc cctggtgcag cgcctggaag
      901 aagctgtgct gcacatcggt gcccgccccg ccccaccaca ccggcacggt gtcggtggtg
      961 accggctgtc catcgcgctg cacgcgcttg cccaggctct ccatcaccag ctgctgcagg
     1021 taggccggca gcagcgccag gcgctggtcg taggtcatca ccgcatgcgt ggcacagccc
     1081 agcaggttgc ggttccagat gtcggtcagg ccgtgcagca ccggcaggtt gcgctccagc
     1141 ggcgcgtcca gcgcatgcgc atccatctgc gccgcgcctt ccagcagctg ctcgaaacgc
     1201 tcgaagccga tcgccagcgc g
//
LOCUS       DAOKIP010000400         1215 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.409,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000400 DAOKIP010000000
VERSION     DAOKIP010000400.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 1215)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1215)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1215
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.409"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..1076)
                     /gene="ddlA"
                     /locus_tag="QEL58_004030"
     CDS             complement(<1..1076)
                     /gene="ddlA"
                     /locus_tag="QEL58_004030"
                     /EC_number="6.3.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004135524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HDS1678454.1"
                     /translation="MARTRVGIIFGGRSSEHEVSLQSAKNILDALDRERFEPVLVGID
                     KQGQWHLSQPDTFLLNADDPSRIALHRSGQSLAVLPGTEQAQLQPSDATSVLGQIDVV
                     LPIVHGPLGEDGALQGLLRMANLPFVGSPVLGSAVAMDKDVAKRLLRDAGLQVAPWLC
                     IRRHQAAAVDVEAVIAQLGLPLFVKPANQGSSVGVSKVKEAAGFAEALELALRYDHKV
                     LVESAVVGREIECAVLGNAQPQASVCGEVVVHDEFYAYDTKYINEGGADVVVPADIDA
                     ATQARIQQIALQAYQALECAGMARVDVFLTADGEIVINEVNTLPGFTRISMYPKLWGA
                     SGVDYTTLITRLIELALERHGADR"
BASE COUNT          213 a          436 c          364 g          202 t
ORIGIN      
        1 tgcctgtcag ccccatggcg ctccagcgcc agttcaatca gccgcgtgat cagcgtggtg
       61 tagtccacgc cgctggcacc ccacaacttc gggtacatgc tgatgcgggt gaagcccggc
      121 agcgtgttga cctcgttgat gacgatctcg ccgtctgcgg tgaggaacac atccacgcgc
      181 gccatgccgg cacactccag cgcctggtag gcctgcagcg cgatctgctg gatgcgcgcc
      241 tgggtggcag cgtcgatgtc cgccggtacc accacgtcgg caccgccttc gttgatgtac
      301 ttggtgtcgt aggcgtagaa ctcgtcgtgc actaccactt caccgcacac gctggcctgc
      361 ggctgcgcgt tgcccagcac cgcgcactcg atttcacggc cgaccaccgc cgactccacc
      421 agtaccttgt ggtcatagcg caacgccagt tccagtgcct cagcaaagcc ggccgcctcc
      481 ttgaccttgc ttacgccgac cgatgaaccc tggttggccg gcttcacgaa cagcggcagg
      541 cccagctggg cgatcaccgc ctcgacatcg accgccgccg cctggtggcg acggatgcac
      601 agccacggcg ccacctgcag cccggcatca cgcagcaggc gcttggccac gtccttgtcc
      661 atcgccaccg ccgagcccag caccggcgaa cccacgaagg gcaggttggc catgcgcagc
      721 aggccctgca gcgcaccgtc ctcgcccagc ggtccatgca cgatcggcaa caccacatcg
      781 atctggccca gcacgctggt cgcatcggac ggctgcagct gcgcctgctc cgtgccggga
      841 aggaccgcca gcgactgccc ggaacgatgc agcgcgatgc gcgacggatc atcggcattg
      901 agcaggaagg tgtcaggctg gctcagatgc cactggccct gcttgtcgat gccgaccagc
      961 accggctcga agcgctcgcg gtcgagggca tcgaggatgt tcttcgccga ctgcagcgaa
     1021 acttcgtgct cggaggacct gcccccgaag atgatgccga cccgggtccg tgccatggcg
     1081 ttgcgatgtc ctgtgcattg cgtggccgta cagcatgaac cttccgctgc cacccaggtg
     1141 aggcacagat gaaccagaat tccatccacg catggcgtgg atctaccgtg tcgaccaagg
     1201 tcgacaccca cccac
//
LOCUS       DAOKIP010000401         1203 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.410,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000401 DAOKIP010000000
VERSION     DAOKIP010000401.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 1203)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1203)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1203
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.410"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            108..1016
                     /locus_tag="QEL58_004031"
     CDS             108..1016
                     /locus_tag="QEL58_004031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDS1678455.1"
                     /translation="MSIELRHLRYFLAVADTLHFGQAAERLGMSQPPLSQQIRQLEEL
                     IGARLFVRSHRRVQLTPAGQLLQERARAIVQQVEAAVDEVQRAQRGEQGELHIGLTRA
                     TPLSPQIPRSILHYRQQYPQVRLQLSEMNTLQQIDALLDGSLDVGIIRKRTLPPELVA
                     HSLFVDPLALIVHAGHPALRRLSKQGTLSLRDFAQEPFVAFRRSAGAGIHDHMIALCA
                     AAGFTPRIVQEAGEASTLISLAAAGLGAAILPSSCDHIRVEGARFVALADAGAHSEVQ
                     LAWRREGVTPLIRNFATLLREAFAEA"
BASE COUNT          184 a          402 c          423 g          194 t
ORIGIN      
        1 cgcaatctgc cggtgggtgc cgacggttgg tcggcacggg gtcggatccc gttgctgcgc
       61 aacgggctct gaccccattt ctggctgacg atgaatacac tgggcccatg tccatcgaac
      121 tgcgccacct gcgctacttc ctcgccgttg ccgatacgct gcacttcggc caggcggcgg
      181 agcggttggg tatgtcgcag ccgccgctca gccagcagat ccgccagctg gaggaactga
      241 tcggagcgcg cctgttcgtg cgcagccatc gccgcgtgca gctgacgccc gccgggcagt
      301 tgctgcagga acgggcgcgg gccatcgtgc agcaggtgga agcggcggtg gacgaggtgc
      361 agcgcgcgca gcgcggcgag cagggcgagc tgcatattgg gctgacccgg gccacgccgc
      421 tgtcgccgca gattccgcgt tcgatcctgc attaccgcca gcagtatccg caggtgcggt
      481 tgcagctgag cgagatgaac accctgcagc agatcgatgc gctgctcgat ggcagcctgg
      541 acgtgggcat catccgcaag cgcacgttgc cacccgagct ggtggcgcac agcctgttcg
      601 tcgatccgct ggcgttgatc gtgcatgccg gccacccggc cctgcgccgg ctctcgaagc
      661 agggcacgct gtcgctgcgc gatttcgcgc aggaaccgtt cgtggcgttc cggcgcagtg
      721 ccggtgcagg tatccacgac cacatgatcg cgctgtgtgc ggcggcgggc ttcacgccgc
      781 gcatcgtgca ggaggccggt gaagcctcga cgctgatcag cctggccgcg gccggcctgg
      841 gcgcggcgat cctgccgtcg tcgtgcgatc acatccgcgt ggaaggcgcg cgcttcgtgg
      901 cgctggccga tgccggtgcg cattcggaag tgcagctggc atggcgccgc gaaggggtga
      961 cgccgctgat ccgcaacttc gccacgctgc tgcgcgaagc gttcgcggaa gcctgattcc
     1021 ggtagatgcc aaccttggtt ggccgccctg ccagagcgcc gaccaaggtc ggcatctacc
     1081 agagcagcgc cgcgcccaag tgaaacgcgc gttggatcac gccgtcaccg gctgcggagc
     1141 acgctgctgc agcgcccaga cgataccgcc gccgatcagg gtcagcacgg cagcgaaggc
     1201 gca
//
LOCUS       DAOKIP010000402         1183 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.412,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000402 DAOKIP010000000
VERSION     DAOKIP010000402.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 1183)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1183)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1183
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.412"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            <1..>1183
                     /locus_tag="QEL58_004032"
     rRNA            <1..>1183
                     /locus_tag="QEL58_004032"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT          327 a          249 c          364 g          243 t
ORIGIN      
        1 attcagtggc gaggttaacc gaatagggga gccgtagaga aatcgagtct taatagggcg
       61 tctagtcgct gggtatagac ccgaaaccgg gtgatctatc catgagcagg ttgaaggttg
      121 ggtaacacta actggaggac cgaacccacc gtcgttgaaa agccggggga tgacttgtgg
      181 ataggggtga aaggctaatc aaactcggtg atagctggtt ctccccgaaa gctatttagg
      241 tagcgcctcg gacgaatacc attgggggta gagcactgtt tcggctaggg ggtcatcccg
      301 acttaccaaa ccgatgcaaa ctccgaatac caatgagtac tatccgggag acagactgcg
      361 ggtgctaacg tccgtagtca agaggaaaac aatccagacc gccagctaag gccccaaaat
      421 catagttaag tgggaaacga tgtgggaagg catagacagc taggaggttg gcttagaagc
      481 agccaccctt taaagaaagc gtaatagctc actagtcgag tcggcctgcg cggaagatgt
      541 aacggggcta aaactatgtg ccgaagctgc ggatgcacat ttatgtgcgt ggtaggggag
      601 cgttctgtaa gccgatgaag gtggattgag aagtctgctg gaggtatcag aagtgcgaat
      661 gctgacgtga gtaacgacaa aacgggtgaa aaacccgttc gccgaaagac caagggttcc
      721 agtccaacgt taatcggggc tgggtgagtc gacccctaag gcgaggccga aaggcgtagt
      781 cgatgggaaa ttggttaata ttccaatact tctgtgtaat gcgatgagag gacggagaag
      841 gttaggtcag cctggcgttg gttgtccagg tggaagacag taggcatgca tcttaggcaa
      901 atccggggtg ctctatgctg agagtcgata gcaagccagt ttactggcga agtggccgat
      961 accatacttc caagaaaagt ctctaagctt cagttacaca ggaatcgtac ccgaaaccga
     1021 cacaggtggt caggtcgagt agaccaaggc gcttgagaga actctgctga aggaactagg
     1081 caaaatggta ccgtaacttc gggagaaggt acgctgctga tggtgatagg acttgctcct
     1141 tgagctgtcg gcagccgcag aaaccaggcc gctgcaactg ttt
//
LOCUS       DAOKIP010000403         1159 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.413,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000403 DAOKIP010000000
VERSION     DAOKIP010000403.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 1159)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1159)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1159
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.413"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            137..1120
                     /locus_tag="QEL58_004033"
     CDS             137..1120
                     /locus_tag="QEL58_004033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014646218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HDS1678456.1"
                     /translation="MQTRELGRSGLKVSALGLGCMGLSHGYGQPVERSQGIALLQAAV
                     ERGVTFFDTAEVYGPYTNEDLLGEALAPYRDRLVIATKFGFKDARVDTGLDSRPENIR
                     AVAEASLKRLRTDHIDLFYQHRVDPNVPIEDVAGTVRDLIAEGKVGHFGLSEASAATV
                     RRAHAVQPVTAVQSEYSLWWREPERELLPTLQELGIGFVPFSPLGRGFLTGAINAETT
                     FDANDFRNTVPRFEVEARRANQALVDRISTIAAARGATPAQVALAWLLAQAPWIVPIP
                     GTTKVHRLDENLGAAALQLAPEELQRIAQALDEVSIVGERYNAQRAAQAKG"
BASE COUNT          187 a          395 c          395 g          182 t
ORIGIN      
        1 cgcagtcgag caagctcgac tctaccgggc gcgctggcga ttgatgaatt ccagtcatga
       61 ccgactgcca tcccgtcggt tcaatcctgc gcccgtgcag gcgtatcgtc agcgctcccc
      121 cctctggagc acgacgatgc agacacgtga actcggccgc agcggcctga aggtttccgc
      181 cctgggcctg ggctgcatgg gcctgagcca tggctatggc cagccggtcg agcgcagcca
      241 gggcatcgcc ctgctgcagg ccgccgttga acgtggcgtg accttcttcg acaccgccga
      301 ggtgtacggc ccgtacacca atgaagatct gctcggggag gcgttggcgc cttaccgcga
      361 caggctggtg atcgccacca agttcggctt caaggatgcg cgtgtcgata ccggcctgga
      421 cagccgcccg gagaacatcc gtgcggtggc cgaggccagc ctcaagcgcc tgcgcaccga
      481 ccatatcgat ctgttctacc agcaccgcgt cgatccgaac gtgccgatcg aggatgtggc
      541 gggcaccgtg cgtgacctga tcgccgaagg caaggtcggc cacttcggcc tgtccgaggc
      601 cagtgccgcg accgtgcgcc gcgcgcatgc ggtgcagccc gtcactgccg tgcagagcga
      661 gtactcgctg tggtggcgcg aaccggaacg cgaactgctg cctaccctgc aggaactggg
      721 cattggcttc gtgccgttca gcccgctggg ccgtggcttc ctgaccggcg cgatcaacgc
      781 cgagaccacc ttcgacgcca acgacttccg caacaccgtg ccgcgtttcg aggtggaagc
      841 gcgccgcgcc aaccaggcgc tggtcgatcg catcagcacg atcgccgcgg cacggggcgc
      901 cacaccggcg caggtggcgc tggcctggct gctggcgcag gcgccgtgga tcgtgccgat
      961 tccgggcacc accaaggttc accgcctgga cgaaaacctg ggcgcggccg cgctgcagct
     1021 ggcgccggag gagcttcagc gcatcgcaca ggcgctggat gaagtgtcga tcgtcggcga
     1081 gcgctacaac gcgcagcgcg ccgcccaggc caagggctga tcacccggtg ggtgcgggcc
     1141 gttggtggtg ggtgcggac
//
LOCUS       DAOKIP010000404         1133 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.414,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000404 DAOKIP010000000
VERSION     DAOKIP010000404.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 1133)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1133)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1133
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.414"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(2..973)
                     /locus_tag="QEL58_004034"
     CDS             complement(2..973)
                     /locus_tag="QEL58_004034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014038471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HDS1678457.1"
                     /translation="MTLHHLPLRSALLLALSALPLAALAEASSPAPTQQVPGVYHQRV
                     GALQVTALFDGVVALGRQEVVDVPPTLVSRLLEGRYVPEDTKGLQTAINAFLVRQGNH
                     LTLVDTGTAQCFGPGLGQVLGNLRASGVDPAEVDEVLLTHAHPDHLCGVLDAQGKPAY
                     PNATVWLSKADADYWLNPASEATAPKGVRFAFPLARNAVAPYQASGHLRTFSPGDALP
                     GGAVAMDTHGHTPGHVSYRFDSQGQSLLVWGDVLHFHAMQFAHPEAAFEADSDRKAAT
                     ASRRGLLQQATANGWWVAGAHLPFPGLGHVRSEGQAYAWVPAEYSPL"
BASE COUNT          175 a          378 c          421 g          159 t
ORIGIN      
        1 ctcacaacgg cgaatactcc gccggcaccc acgcataggc ttggccttcg ctgcgcacat
       61 ggcccaggcc cgggaacggc aggtgcgcac cggccaccca ccaaccgttg gcggtggcct
      121 gctgcagcag gccgcgacgg ctggccgtgg ccgccttgcg gtccgaatcg gcctcgaacg
      181 cggcctccgg gtgcgcgaac tgcatcgcgt ggaagtgcag cacatcgccc cacaccagca
      241 gtgactggcc ctggctgtcg aatcggtagg agacatggcc aggcgtatgg ccatgggtgt
      301 ccatcgccac cgcgccaccg ggcagggcat cgccggggct gaaggtgcgc aggtggccgc
      361 tggcctgata gggcgctacc gcgttgcgcg ccagcgggaa ggcgaagcgc acgcccttcg
      421 gcgcggtggc ctcgctggcc gggttgagcc agtagtcggc atcggccttg gacagccaca
      481 ccgtggcatt cgggtaggcc ggcttgccct gcgcgtcgag cacgccgcac agatggtccg
      541 gatgggcatg ggtcagcagc acctcgtcca cctcggccgg gtccacgccg gaggcacgca
      601 ggttgcccag cacctggccc aggccggggc cgaagcactg cgcggtgccg gtgtcgacca
      661 gggtcaggtg gttgccctgg cgcaccagga aggcgttgat cgcggtctgc aggcccttcg
      721 tgtcttccgg cacgtagcgc ccttcaagca ggcggctgac cagcgttggc ggcacgtcca
      781 ccacttcctg ccggccgagt gcgaccacgc catcgaacag ggcggtgacc tgcagcgcac
      841 cgacgcgctg atggtagacg ccgggcacct gctgggtggg agcgggcgag ctggcttcgg
      901 ccagcgcggc cagcggcagg gcggacaggg ccagcagcag ggcgctacgc aggggcaggt
      961 gatgcagggt catggcagtt ctcggtggat gacgggcggt tccgttgccg gacagcgtgc
     1021 cgtggccagc gtgtgcgcgg cgctcaaagc agtgcgcgga atgctcaggg aggggtgttg
     1081 cctgcagggc tgcgccctgc acctgctgca ggcaacagca acagccgaag caa
//
LOCUS       DAOKIP010000405         1131 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.415,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000405 DAOKIP010000000
VERSION     DAOKIP010000405.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 1131)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1131)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1131
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.415"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            64..1083
                     /locus_tag="QEL58_004035"
     CDS             64..1083
                     /locus_tag="QEL58_004035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008264781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleotide-diphosphate reductase subunit
                     beta"
                     /protein_id="HDS1678458.1"
                     /translation="MADKPKQMLLDPGFELTLRPMRYPQFYDMYRNAIKNTWTVEEIN
                     FQIDITDLHSKMSPGERHLIHRLVAFFATGDSIVSNNLVLNLYQHLNAPEARMYLSRQ
                     LYEEALHVQFYLTLLDNYLPDPEERVKAFAAVENIDSIKKKADFCFKWIDSIQDLKRI
                     ETRAERRQFLLNQICFAACIEGLFFFAAFAYVYYFRSRGLLPGLASGTNWVFRDESAH
                     MEFAFESVRVVREEEPDLFDDEMKQQVYDMLAEAIECEVQFAEDVLSGGVAGISTRDM
                     RQYLQHCADQHFAKLGMEKKYNVRNPLPFMELQDVQELTNFFERRVSAYQVGVQGEVA
                     FDMNF"
BASE COUNT          240 a          363 c          330 g          198 t
ORIGIN      
        1 aaaacaccaa ggtagcgccg ggccatgccc ggcgttttga cccgagaaga caaggaaaca
       61 cccatggccg acaagccaaa gcagatgctg ctcgatcccg gtttcgaact gaccctgcgc
      121 ccgatgcgct acccgcagtt ctatgacatg taccggaacg cgatcaagaa cacctggacg
      181 gtggaagaga tcaacttcca gatcgacatc accgacctgc acagcaagat gtcgccgggt
      241 gagcgccacc tgatccaccg cctggtcgcg ttcttcgcca ccggcgattc gatcgtgtcc
      301 aacaacctgg tgctgaacct gtaccagcac ctcaatgcgc cggaagcgcg catgtacctg
      361 tcgcgccagc tgtatgaaga agcgctgcac gtgcagttct acctgaccct gctcgacaac
      421 tacctgccgg acccggaaga gcgcgtcaaa gccttcgccg cggtggagaa catcgactcg
      481 atcaagaaga aggccgattt ctgcttcaag tggatcgatt cgatccagga cctgaagcgc
      541 atcgagaccc gcgccgagcg ccgccagttc ctgctcaacc agatctgctt cgctgcgtgc
      601 atcgaaggcc tgttcttctt cgccgccttc gcctacgtgt actacttccg ttcgcgcggc
      661 ctgctgccgg gcctggcctc gggcaccaac tgggtgttcc gcgacgagag cgcgcacatg
      721 gaattcgcgt tcgagtcggt gcgcgtggtg cgcgaggaag agccggacct gttcgacgat
      781 gaaatgaagc agcaggtcta tgacatgctg gccgaagcca tcgagtgcga agtgcagttc
      841 gccgaggacg tgctgtccgg cggcgtggcc ggcatttcga cccgcgacat gcgccagtac
      901 ctgcagcact gcgccgacca gcacttcgcc aagctgggca tggaaaagaa gtacaacgtg
      961 cgcaacccgc tgccgttcat ggaactgcag gacgtgcagg agctgaccaa cttcttcgaa
     1021 cgccgcgtct cggcctacca ggtcggcgtg cagggcgaag tcgccttcga catgaacttc
     1081 tgatcgaacc ggtcaggcct gtcgtaacgg aaaccccggc caacgccggg g
//
LOCUS       DAOKIP010000406         1072 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.416,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000406 DAOKIP010000000
VERSION     DAOKIP010000406.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 1072)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1072)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1072
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.416"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            272..499
                     /locus_tag="QEL58_004036"
     CDS             272..499
                     /locus_tag="QEL58_004036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010615788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YgdI/YgdR family lipoprotein"
                     /protein_id="HDS1678459.1"
                     /translation="MKKIFVSVFAAAVALSALTGCTRTSYAIHTNDGRTIVSDGKPKE
                     SDSGLLGYTDANGVKQQINKTDVKEVSEIPH"
     gene            865..1050
                     /locus_tag="QEL58_004037"
     CDS             865..1050
                     /locus_tag="QEL58_004037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000165998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rop family plasmid primer RNA-binding protein"
                     /protein_id="HDS1678460.1"
                     /translation="MTRQESAALNMAKFIRAQTLLLLERLEQMDLDEAAGCCEHLHDQ
                     AEALYAMLNAQIGEENA"
BASE COUNT          327 a          292 c          225 g          228 t
ORIGIN      
        1 gagattacgc gcggaaaaaa aggatctcaa gaagatcctt tataaattag acatccaacc
       61 tcacaaagag gaatacttaa atcatcttgg tatatgtatc ggccggatta catctcatat
      121 aagcctcctc cccgcctgac accacacttt gaccatagca cctcgcgcct aactcgatat
      181 acagcccacc atcaagcctc ttttcacata aaaaatgacc tatagttaga tggttagtga
      241 ccaaaactga tatggataaa aggagctggc tttgaaaaag atttttgttt cagtgttcgc
      301 agcggcagtt gcgctttcag ccctcaccgg ctgcacgcgc acaagctatg ccatacacac
      361 caatgacggt cgcactattg tcagcgacgg caaacctaaa gaatcagact caggcctgct
      421 tggctataca gacgcgaatg gtgtcaaaca gcagatcaat aaaaccgacg ttaaagaagt
      481 ctccgaaatt ccgcactgag catcttctcc gaaaaaggcc gctaatgtgg cctttttctt
      541 tacctgtggt tctccgccaa aatcccagca aattgcatca ccaaagctaa aagctttcag
      601 ggttgtctaa aaagcacaag acataagagg aagtgcggta ttttataatc aagcccccaa
      661 gaatttacca taacatccgt tgcccgcacc gcctgagacg cgttcagcgc gttcctgacg
      721 aaaccatgac aaaaaccaca acaaaccacc ccggaacccg tcagaaacgc gcctgttaaa
      781 ttttaacggc atgcatgact atgcaccaga atgacgccat gctcttttca cgcaaaaatc
      841 atcaccagac ggggaaaatc accagtgacc agacaggaat ccgccgccct caatatggcc
      901 aaatttatcc gcgcacagac acttctcctc cttgagcggc tcgagcagat ggatctggat
      961 gaggctgccg gctgctgtga gcacctgcac gatcaggccg aagcgcttta cgccatgctg
     1021 aacgcacaga taggcgagga aaatgcgtga aaatcggtga acgggtgcgc aa
//
LOCUS       DAOKIP010000407         1064 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.417,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000407 DAOKIP010000000
VERSION     DAOKIP010000407.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 1064)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1064)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1064
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.417"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..>1064)
                     /locus_tag="QEL58_004038"
     CDS             complement(<1..>1064)
                     /locus_tag="QEL58_004038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
                     /protein_id="HDS1678461.1"
                     /translation="PPEPPPAPPPTDPEVPEVPVAGGSLPGTGAPPTPDARPAEGAVV
                     PLYRVETATYAVLPPLLREASLASLGTFHERQGEQRLLYNQGALRTAWGRLVGQSSEI
                     HWKGDAQPGFDGDVMGLQAGLDVWAAANDNHRNQIGVFVGRTRAQGKTTGLALGWENV
                     QVGQNRLDDKHVGLYWTLTGSNGGYIDAVAMQSRYDGRVRSSRGLGFGIKGDGTSVSV
                     EAGKPLLQFGQSAWWLEPQVQVIWQRTALDDRRDVVSSVRFDNDNAWTGRIGLRLAGD
                     YQLADNGWQPYFKLNYWHGRSGEDRIRFDDDVIVNSQRSRALEAGVGVVGRFNRTISA
                     YAVADYTRELGGDRNEKRRI"
BASE COUNT          153 a          390 c          352 g          169 t
ORIGIN      
        1 gatgcggcgc ttctcgttgc gatcgccgcc cagttcgcgg gtgtaatcgg ctaccgcgta
       61 ggcgctgatg gtgcggttga agcgcccgac cacccccacg ccggcttcca gcgcacgcga
      121 gcgctgcgag ttgacgatca cgtcgtcgtc gaagcggatg cgatcctcgc cggaacggcc
      181 atgccagtaa ttgagcttga agtacggctg ccagccgttg tcggccaact ggtagtcacc
      241 ggccaggcgc aggccgatgc ggccggtcca ggcgttgtcg ttgtcgaagc gcacgctcga
      301 caccacatcg cgacggtcat ccagcgcggt acgctgccag atcacctgta cctgcggttc
      361 cagccaccag gccgactggc cgaactgcag cagcggcttg ccggcctcca ccgacacgct
      421 ggtgccatcg cccttgatgc cgaagcccag cccgcgcgag gaacgcacgc gcccgtcgta
      481 acggctctgc atcgctaccg catcgatgta gccaccgttg ctgccggtga gcgtccagta
      541 caggcccacg tgtttgtcgt ccagccggtt ctggcccacc tgcacgttct cccagcccag
      601 cgccaggccg gtggtcttgc cctgtgcgcg ggtacggccg acaaacacgc cgatctggtt
      661 gcgatggttg tcgttggccg cagcccacac atcaaggccg gcctgcaggc ccatcacatc
      721 gccgtcgaac ccaggctgcg catcgccctt ccagtgaatc tcgctgctct gcccgaccag
      781 ccggccccag gcggtgcgca gcgccccctg gttgtacagc aggcgctgct cgccctgccg
      841 ttcgtggaac gtgccgaggc tggccagaga ggcctcgcgc agcaggggcg gcagcaccgc
      901 gtaggtggcg gtctccacgc ggtacagcgg caccacggcg ccctctgccg ggcgcgcatc
      961 cggtgtcggc ggcgcgccgg tgccgggcag actgccaccg gccaccggca cctcgggcac
     1021 ttccggatcg gtcggcggcg gcgccggcgg tggctccggc ggcg
//
LOCUS       DAOKIP010000408         1058 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.418,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000408 DAOKIP010000000
VERSION     DAOKIP010000408.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 1058)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1058)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1058
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.418"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..894)
                     /locus_tag="QEL58_004039"
     CDS             complement(<1..894)
                     /locus_tag="QEL58_004039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014038453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDS1678462.1"
                     /translation="MPLPDLNLLLALDILLDEGSVAGAARRMNLSAPAMSRTLGRIRD
                     ALGDPVLVRAGRGLAPTPRALELREQVRDVIEQAHRVFNEGREVDIQTLERTFSIRAN
                     DVFIGSYGGRLRDVFREQAPGCTLRFMPEGDTDDDAMVQGRIDLYISTAGKHTQETKV
                     QNLFTTALLGAARKDHPLFDGDITAERFAACDHIAVSRRGIAHGPIDDELAQLGLQRR
                     VAMVIPTFHGAIFAAAASDLVLPQMPSVMLDRIAYMGLPLRMFPLPVPVRTVALVQAW
                     HPRMDNDPAHRWLRRAIKSMCD"
BASE COUNT          175 a          356 c          348 g          179 t
ORIGIN      
        1 gtcgcacatg ctcttgatcg cacggcgcag ccagcggtgc gccgggtcgt tgtccatgcg
       61 cgggtgccag gcctgcacca gcgccaccgt gcgtaccggc accggcaacg ggaacatgcg
      121 cagtggcagc cccatgtagg cgatgcgatc gagcatcacg ctgggcatct gcggcagcac
      181 caggtccgag gcggctgcag caaagatcgc gccatggaag gtggggatga ccatcgccac
      241 ccgccgctgc aggcccagct gtgcgagttc gtcgtcgatc ggcccatgcg cgatgccgcg
      301 ccgcgagacg gcgatgtggt cgcatgcggc aaaccgttcg gcggtgatat cgccgtcgaa
      361 cagcgggtga tccttgcgcg ctgcgcccag cagggccgtg gtgaacaggt tctgcacctt
      421 ggtttcctgg gtgtgcttgc cggcagtgct gatatacagg tcgatccggc cctgcaccat
      481 cgcgtcatcg tcggtatcgc cttcgggcat gaaccgcagc gtgcagcctg gcgcctgctc
      541 gcggaacacg tcccgcaggc ggccgccgta gctgccgatg aacacgtcgt tggcgcggat
      601 gctgaaggta cgttccaagg tctggatgtc cacctcgcgc ccttcgttga acacccgatg
      661 ggcctgctcg atcacgtcgc gcacctgctc gcgcagttcc agcgcgcgtg gggtcggcgc
      721 caggccgcgg ccggcgcgta ccagcaccgg gtcgcccagc gcgtcgcgga tccgccccag
      781 ggtgcggctc atggccggcg cgctcagatt catgcgccga gccgctcccg cgacgctgcc
      841 ttcgtccagc aggatatcca gggccagcag caggttgaga tcgggcaacg gcatggcagt
      901 ctccaataaa tggagtgact ctacgacact ccaagtaaaa gtcgattgca tgccatgcac
      961 gtattgcctg cgccgcacgg catgggtgcg cgcggtgaca tcggccacca tccccaacct
     1021 gccaaggaga catccatgtt caataccctg ctggtcgc
//
LOCUS       DAOKIP010000409         1026 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.419,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000409 DAOKIP010000000
VERSION     DAOKIP010000409.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 1026)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1026)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1026
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.419"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            77..544
                     /locus_tag="QEL58_004040"
     CDS             77..544
                     /locus_tag="QEL58_004040"
                     /EC_number="2.5.1.78"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011409394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6,7-dimethyl-8-ribityllumazine synthase"
                     /protein_id="HDS1678463.1"
                     /translation="MSHYEGDLRTPESARFAILASRWNARITDALVAGARLSLAGNGV
                     SEANIDVIRVPGAWELPLVAARLAAAHEHAAILTLGCVIRGDTRHYEHVADRCAEGLM
                     RVQLDFGVPVLNGVLAVERVEDAEARAGGSHGNKGEEVALAALEMVNLLEQLP"
     gene            541..1020
                     /gene="nusB"
                     /locus_tag="QEL58_004041"
     CDS             541..1020
                     /gene="nusB"
                     /locus_tag="QEL58_004041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005408062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HDS1678464.1"
                     /translation="MNKNTQGKPSGKPVRRDGVDPVLRSRARRRAVQALYAWQISGGN
                     AQSLIAQFAHEQAREIADLAYFEALVHGVLDNRRDIDEALGPYLDRGIEEVDAIERAV
                     LRLAGYELRYRLDVPYRVVINEAIESAKRFGSEHGHTYVNGVLDRAAVEWRKVESGH"
BASE COUNT          179 a          365 c          330 g          152 t
ORIGIN      
        1 ctgtgggccc ccgccagcca cggccggggc ccatccacgg tagaatcacc cccttatcga
       61 gtcccccaag ccgcatatga gccactacga aggcgatctt cgcactcccg agtcggcgcg
      121 cttcgccatc ctggccagcc gctggaatgc ccgcatcacc gacgcgctgg tcgcgggcgc
      181 ccgcctgagc ctggccggca acggcgtcag cgaagccaac atcgacgtga tccgcgtgcc
      241 gggtgcctgg gaactgccgc tggtggccgc acgcctggct gccgcgcatg aacacgccgc
      301 cattctcacc ctgggctgcg tcatccgtgg cgacacccgc cactatgaac acgtggccga
      361 ccgctgcgcc gaaggcctga tgcgcgtgca gctggatttc ggcgtgccgg tgctgaacgg
      421 cgtgctggcg gtggaacgcg ttgaagacgc cgaggctcgc gcaggcggca gccacggcaa
      481 caagggcgag gaagtcgcac tcgccgcatt ggaaatggtc aacctgctgg agcaactgcc
      541 atgaacaaga acacccaggg caagccctcc ggtaaacccg tccgccgcga tggcgtcgac
      601 ccggtgctgc gctcgcgcgc gcgccgtcgt gccgtgcagg cgctgtatgc ctggcagatc
      661 tccggcggca acgcacaatc gctgatcgcc cagttcgccc acgagcaggc ccgcgaaatc
      721 gccgatctgg cctatttcga agcgctggtg catggcgtgc tggacaaccg ccgcgacatc
      781 gacgaagcgc tcggcccgta cctggaccgt ggcatcgaag aagtggatgc catcgaacgc
      841 gccgtgctgc gcctggccgg ctacgagctg cgctaccgcc tggacgtgcc gtaccgcgtg
      901 gtcatcaacg aagccatcga atcggccaag cgcttcggct ccgagcacgg ccacacttac
      961 gtcaacggcg tgctggatcg tgccgccgtg gaatggcgca aggtcgaatc gggtcactga
     1021 cccgcc
//
LOCUS       DAOKIP010000410         1016 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.420,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000410 DAOKIP010000000
VERSION     DAOKIP010000410.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 1016)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1016)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1016
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.420"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(8..952)
                     /locus_tag="QEL58_004042"
     CDS             complement(8..952)
                     /locus_tag="QEL58_004042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheV"
                     /protein_id="HDS1678465.1"
                     /translation="MSHDLLNRIDQRTRLAGHNRLALLLFRLGGRQLFGVNVFKVQEV
                     LRRPELFQVPGLPSQFSGVADVRGRSVPVLDLGLAIGHPEREPDADTSPGYLVVTEFN
                     RSIQGFLVSGVERIVNIAVEDIHPPPELGAESSYLTAVTRFQGELIQVIDVESVLADI
                     AQVRGEAVLDPAMAMPADGPQLQVLVVDDSRVARQQIRSVLDQLGVGATLLSDGKQAL
                     DHLLQIHASGENPAERYAMVISDIEMPAMDGYTLTTEIRRHPGLAGLYVLLHTSLSGV
                     FNNAMVERVGANAFVAKYSPHELADFVLDRLRKVALAA"
BASE COUNT          165 a          341 c          350 g          160 t
ORIGIN      
        1 cgggccgtca ggccgccagt gcgaccttgc gcaggcggtc cagcacgaag tcggccagct
       61 cgtgcggcga gtacttggcg acgaaggcgt tggcgcccac gcgctcgacc atcgcattgt
      121 tgaatacgcc cgacagcgag gtgtgcagca gcacgtacag gccggccagg cccgggtgcc
      181 gccggatttc cgtcgtcagc gtatagccgt ccatggccgg catctcgatg tccgagatca
      241 ccatcgcgta gcgttcggcc gggttctcgc ccgaggcgtg gatctgcagc aggtggtcca
      301 gcgcctgctt gccatcggac agcagggtcg cccccacgcc cagctggtca agcacgctgc
      361 ggatctgctg gcgggccacg cgcgagtcgt ccaccaccag cacctgcagc tgcgggccat
      421 cggcgggcat cgccatcgcc gggtcgagca cggcttcacc gcggacctgg gcaatgtcgg
      481 ccagcacgct ttcgacgtcg atcacctgga tcagctcgcc ctggaagcgg gtcacggcgg
      541 tcaggtagct cgattcagcg cccagctccg gcggcgggtg gatgtcttcc accgcgatgt
      601 tgacgatgcg ctccacgcca ctgaccagga agccctggat cgagcggttg aattcagtga
      661 cgaccaggta gccgggcgag gtgtccgcat cgggctcacg ctcggggtgg ccgatcgcca
      721 ggcccaggtc cagcaccggc accgagcggc cccgcacgtc ggccacgccg gagaactggc
      781 tgggcagtcc gggcacctgg aacagctccg ggcggcgcag gacttcctgc accttgaaga
      841 cattgacgcc aaaaagctga cgtccgccga gacggaacag cagcagcgcc aggcggttgt
      901 ggccggccag tcgggtccgc tggtcgatcc ggttgagcag gtcatgggac atggctgctg
      961 tatcggcgcg ctcggcaccg aacttgagcg cttttgtagc gtcgagccat gctcgg
//
LOCUS       DAOKIP010000411         1016 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.421,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000411 DAOKIP010000000
VERSION     DAOKIP010000411.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 1016)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1016)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1016
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.421"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(2..967)
                     /locus_tag="QEL58_004043"
     CDS             complement(2..967)
                     /locus_tag="QEL58_004043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005414506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid A deacylase LpxR family protein"
                     /protein_id="HDS1678466.1"
                     /translation="MRDHPPQVNIRVDNDLFGGRHQDQGYTNGAQLTLVSPNLVDYTD
                     DPCLPRMARWVNQYLEGLHPGRFEQQNMIFSIGQGIFTPTDPARRDLIKDDRPYAGVL
                     IASFGFNARSGDRLQTTQLTLGVVGPWAQGKQVQDAVHDILNDKKFEGWDNQLHNEPL
                     FMLTHERMRRWPADASVNAGGWGWDAISHYGGAIGNLETKANAGGEVRFGWKLPDDFG
                     STPLRPAGENTAPTRGGRPSGWSWHMFVTTDAAWVIRDITLDGNTFRSSHSVDKRHVV
                     AQGGYGMALTHGRWKFAVARYHSTREFYGQREAPVFGSFTISRSL"
BASE COUNT          147 a          324 c          359 g          186 t
ORIGIN      
        1 cttacagcga gcggctgatg gtgaagctgc cgaacaccgg ggcctcgcgc tggccgtaga
       61 actcgcgggt gctgtggtag cgcgccaccg cgaacttcca gcggccatgg gtcagcgcca
      121 tgccgtagcc gccctgggcg accacgtggc gcttatcgac gctgtggctg ctgcggaacg
      181 tgttgccgtc cagggtgatg tcgcggatta cccaggccgc gtcggtggtg acgaacatgt
      241 gccacgacca gccgctggga cggccgccac gcgtcggcgc ggtgttctcg ccggccggac
      301 gcagcggcgt gctgccgaaa tcatcgggca gcttccagcc gaaacgtact tcgccaccgg
      361 cattggcctt ggtctccagg ttgccgatcg caccgccgta gtggctgatc gcatcccagc
      421 cccagccgcc ggcattgacg ctggcatcgg ccggccagcg gcgcatgcgc tcgtgggtca
      481 gcatgaacag cggttcgttg tgcagctggt tgtcccagcc ttcgaacttc ttgtcattga
      541 ggatgtcgtg caccgcatcc tgcacctgct tgccctgtgc ccatggaccg accacgccca
      601 gcgtcagctg ggtggtctgc aggcggtcgc cgctgcgcgc gttgaagccg aagctggcga
      661 tcagcacgcc ggcatacggt cgatcatcct tgatcaggtc gcggcgggcc ggatcggtcg
      721 gggtgaaaat gccctggccg atactgaaga tcatgttctg ctgctcgaac ctgcccgggt
      781 gcaggccttc caggtactgg ttcacccagc gcgccatgcg cggcaggcag gggtcatcgg
      841 tgtagtcgac caggttcggc gagaccaggg tcagctgggc gccgttggtg tagccctggt
      901 cctggtggcg gccaccgaac aggtcgttgt cgacgcggat gttgacctgt ggcgggtggt
      961 cgcgcatcgc atccgggccg catcgttcgg cggcctgggc ggcaaggggg agggca
//
LOCUS       DAOKIP010000412          983 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.422,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000412 DAOKIP010000000
VERSION     DAOKIP010000412.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 983)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 983)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..983
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.422"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..>983)
                     /locus_tag="QEL58_004044"
     CDS             complement(<1..>983)
                     /locus_tag="QEL58_004044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011259949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system Vgr family protein"
                     /protein_id="HDS1678467.1"
                     /translation="AEAQARLDALRVGQVLYSGSGSERQLTAGSTFSLAQHPQHEGQA
                     FQLLAVQHVALNNLDQGIADLLGSPALERGAYRNSFIATGSGVPLRALPQDRPTLHGP
                     QTARVVGIANTAVTPNREHQVRIQFGWQRGSTPNPGGLTDTGSAQPGHAPGDHTSGSW
                     VAVAEWVAGPNWGTSFLPRVGSEVLVEFLHGDIDQPRITGQLYNGEVAPPFGGGIDEN
                     ARHPGVLSGLHTQAHDGSGTQQWLMDDTPGQLRTRLHSSLADSRLELGYLIAHQDTAR
                     GALRGEGFELATQGWGNVHASEGLLLSASLQERAASTVMDNASVVAQLKGA"
BASE COUNT          109 a          333 c          380 g          161 t
ORIGIN      
        1 tcggcgcctt tgagctgcgc caccacgctg gcgttgtcca tcaccgtgga tgcggcgcgc
       61 tcctgcaggc tggccgacag cagcaggcct tcgctggcat gcacgttgcc ccagccctgg
      121 gtggccagct cgaaaccttc gccgcgcagc gcgccgcggg cggtgtcctg atgggcgatc
      181 aggtagccca gttccagccg gctgtcggcc agcgagctgt gcaggcgggt gcgcagctgg
      241 ccgggggtgt catccatcag ccactgctgg gtgccgctgc cgtcgtgggc ctgggtatgc
      301 aggccactga gcacgccggg atggcgcgcg ttctcgtcga tgccaccgcc gaagggcggg
      361 gcgacctcgc cgttgtacag ctggccggtg atgcgtggct ggtcgatgtc gccgtgcagg
      421 aattccacca gcacctcgct gcccacgcgg ggcaggaagc tggtgcccca gttggggccg
      481 gccacccatt cggccacggc cacccagctg ccgctggtgt ggtcgccggg ggcatggccg
      541 ggctgggcgc tgccggtgtc ggtcaggccg ccggggttgg gcgtgctgcc gcgctgccag
      601 ccgaactgga tgcgcacctg gtgctcgcgg ttgggggtca ccgccgtgtt ggcgatgccg
      661 accacgcgcg cggtctgcgg gccgtgcagg gtggggcggt cctgcggcag ggcgcgcagc
      721 ggcacgccac tgccggtggc gatgaagctg ttgcggtagg caccgcgctc cagtgccggg
      781 ctgcccagca ggtcggcgat gccctggtcc aggttgttca gggccacgtg ctgcaccgcc
      841 agcagctgga aggcctggcc ttcgtgctgt ggatgctggg ccaggctgaa ggtgctgccg
      901 gcggtcagct ggcgctcgct gccgctgccg ctgtagagca cctggccgac gcgcagcgca
      961 tccagccgcg cctgcgcttc ggc
//
LOCUS       DAOKIP010000413          973 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.423,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000413 DAOKIP010000000
VERSION     DAOKIP010000413.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 973)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 973)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..973
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.423"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            59..970
                     /gene="hemC"
                     /locus_tag="QEL58_004045"
     CDS             59..970
                     /gene="hemC"
                     /locus_tag="QEL58_004045"
                     /EC_number="2.5.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012512180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylbilane synthase"
                     /protein_id="HDS1678468.1"
                     /translation="METVRIATRKSPLALWQSEHVADRLRQAHPGLHVELVPMSTRGD
                     EVLDRSLAAIGGKGLFLKELELAMLRGEADCAVHSLKDVPMELDAPFALPAMLTRHDP
                     ADGFVSNLYASLEALPIGARVGTSSLRRQAQLRALRPDLELLDLRGNVNTRLAKLDNG
                     GYDAIVLAVAGLERLGLGQRIVARLQPPQWLPAPAQGAVAVECDGGNARLMALFAGLD
                     DASTRACVEAERAMNRALHGSCHVPVAAIAQWQGNDLHLQGLVGSASDGRAVRAEAVG
                     PASDPDALGQRVATMLLDAGAGELLNV"
BASE COUNT          136 a          337 c          359 g          141 t
ORIGIN      
        1 cagccacgag gggctccgcc gttggccgta tccgcgccga aggcgcgata atgcccggat
       61 ggaaaccgtc cgcatcgcca cccgcaagag cccgctcgcc ctctggcaga gcgaacacgt
      121 cgccgaccgc ctgcgccagg cccaccccgg cctgcacgtg gaactggtgc cgatgagcac
      181 ccgcggcgac gaggtgctgg accgctcgct ggccgccatc ggtggcaagg gcctgttcct
      241 gaaggaactg gagctggcca tgctgcgcgg tgaggccgac tgtgccgtgc attcgctgaa
      301 ggacgtgccg atggagctgg acgcgccgtt tgcgttgccg gcgatgctga cccggcacga
      361 ccctgctgat ggcttcgtct ccaacctgta cgcctcgctg gaggcgctgc cgatcggtgc
      421 gcgtgtcggc acgtcctcgc tgcgccgcca ggcccagctg cgcgcgctgc gcccggacct
      481 ggaactgctg gacctgcgcg gcaacgtcaa cacccgcctg gccaagctcg acaatggtgg
      541 ctacgacgcc atcgtgctgg ccgtggccgg gctggaacgg ctgggcctgg gccagcgcat
      601 cgtcgcgcgc ctgcagccgc cgcagtggtt gccggcgccg gcacaaggcg cggtggcagt
      661 cgaatgcgat ggcggcaacg cacgcctgat ggccctgttc gcggggcttg acgacgcttc
      721 cacccgcgcc tgtgtggagg ccgagcgggc gatgaatcgt gcgctgcatg gcagctgcca
      781 cgtgccggtg gcggcgatcg cgcagtggca gggcaatgac ctgcacctgc agggcctggt
      841 cggcagcgcc agtgacggcc gcgcggtacg cgccgaagcg gtggggccgg ccagcgaccc
      901 ggatgcgctg ggccagcgcg tggcgacgat gctgctggac gccggtgccg gcgagctgtt
      961 gaacgtctga gcc
//
LOCUS       DAOKIP010000414          962 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.424,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000414 DAOKIP010000000
VERSION     DAOKIP010000414.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 962)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 962)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..962
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.424"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            <1..726
                     /locus_tag="QEL58_004046"
     rRNA            <1..726
                     /locus_tag="QEL58_004046"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
     gene            852..>962
                     /gene="rrf"
                     /locus_tag="QEL58_004047"
     rRNA            852..>962
                     /gene="rrf"
                     /locus_tag="QEL58_004047"
                     /product="5S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00001"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00001"
BASE COUNT          220 a          237 c          295 g          210 t
ORIGIN      
        1 ccctgtcgtg cttgacgttc taacctgggc ccattatctg ggtcggggac cgtgtatggt
       61 gggtagtttg actggggcgg tctcctccta aagagtaacg gaggagctcg aaggtacgct
      121 cagcgcggtc ggacatcgcg cactgtgtgc aaaggcataa gcgtgcttga ctgcaagatc
      181 gacggatcaa gcaggtagga aactaggact tagtgatccg gtggttctgt atggaagggc
      241 catcgctcaa cggataaaag gtactccggg gataacaggc tgataccgcc caagagttca
      301 tatcgacggc ggtgtttggc acctcgatgt cggctcatca catcctgggg ctgtagtcgg
      361 tcccaagggt atggctgttc gccatttaaa gtggtacgcg agctgggttc agaacgtcgt
      421 gagacagttc ggtccctatc tgccatgggc gttggagatt tgagaggggc tgctcctagt
      481 acgagaggac cggagtggac gaacctctgg tgttccggtt gtcacgccag tggcattgcc
      541 gggtagctat gttcggaagc gataaccgct gaaagcatct aagcgggaag cgcgcctcaa
      601 gatgagatct cccggggcac aagccccctg aaggaaccat gtagactacg tggttgatag
      661 gtcaggtgtg taagtacagc aatgtattga gctaactgat actaatgatc cgtgcggctt
      721 gaccatataa cctcaagttg ccttggcttt acgacaacgt cgtaagagca tccaagtgca
      781 cgctacgtca caagaactat gcgaggctgg cgccttgtcc caagggacga gtgcgactct
      841 ccaaaagcct ccctggtgaa attagcgctg tggaaccacc cgatcccatc ccgaactcgg
      901 aagtgaaacg cagctgcgcc gatggtagtg tggctcaagc catgcgagag taggtcatcg
      961 cc
//
LOCUS       DAOKIP010000415          928 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.425,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000415 DAOKIP010000000
VERSION     DAOKIP010000415.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 928)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 928)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..928
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.425"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            <1..152
                     /locus_tag="QEL58_004048"
     rRNA            <1..152
                     /locus_tag="QEL58_004048"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
     gene            214..290
                     /locus_tag="QEL58_004049"
     tRNA            214..290
                     /locus_tag="QEL58_004049"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:248..250,aa:Ile,seq:gat)
     gene            345..420
                     /locus_tag="QEL58_004050"
     tRNA            345..420
                     /locus_tag="QEL58_004050"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:378..380,aa:Ala,seq:tgc)
     gene            784..>928
                     /locus_tag="QEL58_004051"
     rRNA            784..>928
                     /locus_tag="QEL58_004051"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT          272 a          174 c          237 g          245 t
ORIGIN      
        1 tgtacacacc gcccgtcaca ccatgggagt ttgttgcacc agaagtaggt agtctaaccg
       61 caaggaggac gcttaccacg gtgtggccga tgactggggt gaagtcgtaa caaggtagcc
      121 gtaggggaac ctgcggctgg atcacctcct taacgaaaga ttgacgattg gtaagaatcc
      181 acaacaagtt gttcttcatg acgatgtatc tgagggtctg tagctcagtt ggttagagca
      241 cacgcttgat aagcgtgggg tcacaagttc aagtcttgtc agacccacca ctactgacga
      301 aagcagtatg cagaaaaaca gatatattga cttattgata agctggggac ttagcttagt
      361 tggtagagcg cctgctttgc acgcaggagg tcaggagttc gactctccta gtctccacca
      421 cgaatcaaac atgatttgat tcgaagctag agattacaga atttaataaa tggaaggttc
      481 aagaatcctg gtttattaac ttctgtgatt tatcacagtt gactgcaatc cgacgaggat
      541 gcagtgaatc attaacagat tggcaaattt gagtctgaaa taaattgttc aactcattca
      601 atagacgtta cagggtaacc tgttaactaa cgtagattga actgagaact agcaaattaa
      661 ctgaatcaag cgttttggta tatgaattta gattgaagct gtacagtgct taaatgcaca
      721 gtactctaaa ctgtaatgtt gaagttgctc cttgtaggta acgtcgactg tttggggttg
      781 tatagtcaag taattaagtg catgtggtgg atgccttggc agtcagaggc gatgaaagac
      841 gtgatagcct gcgaaaagct tcggggaggc ggcaaatatc ctgtgatccg gagatgtctg
      901 aatggggaaa cccacttacc ataaggta
//
LOCUS       DAOKIP010000416          925 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.426,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000416 DAOKIP010000000
VERSION     DAOKIP010000416.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 925)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 925)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..925
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.426"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            <1..841
                     /gene="folD"
                     /locus_tag="QEL58_004052"
     CDS             <1..841
                     /gene="folD"
                     /locus_tag="QEL58_004052"
                     /EC_number="1.5.1.5"
                     /EC_number="3.5.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014036908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="bifunctional methylenetetrahydrofolate
                     dehydrogenase/methenyltetrahydrofolate cyclohydrolase
                     FolD"
                     /protein_id="HDS1678469.1"
                     /translation="DGRRIAEDLLDSLKVRVDARVAAGGSRPGLAVVLVGGDPASTVY
                     VRNKRRAAEKVGIEAHDYDLPAGTTEAELLDLIDQLNADPKINGILIQLPLPGIPDAR
                     RLIQRIDPRKDVDGFHPENVGHLALREFGLRPCTPRGITTLLGHTDQPVRGRNATIVG
                     VSNHVGRPMGLELLIAGCTVTSCHKFTPKDVLEQAVRNADILVVAVGRPGIVPGEWVK
                     PGAVVIDVGINRLDDGRLVGDVGFEAAAQRASWITPVPGGVGPMTVATLMQNTLEAAE
                     ALS"
BASE COUNT          142 a          308 c          334 g          141 t
ORIGIN      
        1 tgatggccgc cgtatcgccg aggacctgct cgacagcctg aaggtgcgcg tcgacgcccg
       61 cgtggccgcc ggtggcagcc gtccgggcct ggccgtggtg ctggtgggcg gcgacccggc
      121 ctcgaccgtg tacgtgcgca acaagcgccg cgccgccgag aaggtcggca tcgaggcaca
      181 tgactacgac ctgccggccg gtaccaccga agccgagctg ctcgacctga tcgaccagct
      241 caatgccgac ccgaagatca acggcatcct gatccagctg ccgctgccgg gcatccccga
      301 cgcgcgccgc ctgatccagc gcatcgaccc gcgcaaggac gtggatggtt tccacccgga
      361 aaacgtcggc cacctggctt tgcgcgagtt cggtctgcgc ccgtgcaccc cgcgcggcat
      421 caccacgctg ctgggccaca ccgaccagcc ggtgcgtggc cgcaacgcca ccatcgtggg
      481 cgtgagcaac cacgtcggcc gcccgatggg cctggagctg ctgattgccg gctgcaccgt
      541 gaccagctgc cacaagttca ccccgaagga cgtgctggaa caggccgtgc gcaacgccga
      601 catcctggtg gtggcggtgg gccgcccggg catcgtgccg ggcgagtggg tgaagccggg
      661 cgcggtggtg atcgacgtgg gtatcaaccg gttggatgac ggccggttgg tgggtgacgt
      721 cgggtttgag gcggctgccc agcgggcgag ctggatcacc ccggtgccgg gtggggtggg
      781 cccgatgacc gtggccacgt tgatgcagaa caccctggaa gcggccgaag cgctgagctg
      841 accttttggg gtggtgccga ccgttggtcg gcacaatgcg gacatgcgga tgacccgctc
      901 ctggtaggtg ccaaccttgg ttggc
//
LOCUS       DAOKIP010000417          924 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.427,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000417 DAOKIP010000000
VERSION     DAOKIP010000417.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 924)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 924)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..924
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.427"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(40..>924)
                     /locus_tag="QEL58_004053"
     CDS             complement(40..>924)
                     /locus_tag="QEL58_004053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate mutase"
                     /protein_id="HDS1678470.1"
                     /translation="SRLAAAALPDDVARALGRATALQLDAGERAQLQRHFSVAAPQWP
                     VAALTRQRDVGDAAGARWLRADPACMVPDMHGARMMAYGETLRPTLADCLALLPVLQP
                     LFADAGFVLDAPDPSRWYLRLPIDLALPEFDSPDEVLGDDLFSHLPEGEGGRRWRALM
                     TEAQVLLHNHSWNQQRVAQGQQPINSLWFWGGGVMPVSVSTAHAQVRSRDALLQGLAL
                     AAGVAVDGEQAVDALVDLRQLRSSQQLGNDAIRPLLAALKRGELQRLVLDFEDGLQFQ
                     LDRGQRWQFWKKPRQLHD"
BASE COUNT          165 a          349 c          290 g          120 t
ORIGIN      
        1 tcagagccgc tttccgacga aaaacggatc cgaccccgat cagtcgtgca gctgccgcgg
       61 cttcttccag aactgccagc gctggccacg gtccaactgg aactgcaggc catcctcgaa
      121 gtccagcacc agtcgctgca gctcgcctcg cttcagcgcg gccagcagcg gccggatcgc
      181 atcattgccc aactgctgcg atgaacgcag ttggcgcagg tcgaccaacg catccaccgc
      241 ctgctcgcca tccaccgcca cgccagccgc cagcgccagg ccctgcagca gggcatcgcg
      301 gctgcgcacc tgcgcgtgcg ccgtgctgac cgataccggc atcacgccac cgccccagaa
      361 ccacagcgaa ttgatcggct gttgcccctg ggccacgcgc tgctggttcc aggaatggtt
      421 gtgcagcagc acctgcgcct cggtcatcaa cgcccgccaa cggcggccgc cctcgccttc
      481 cggcaggtgc gagaacaggt catcgcccag cacttcgtcc gggctgtcga actcgggcag
      541 cgccaggtcg atcggaagcc gcaggtacca gcgcgaagga tcgggtgcgt cgagcacgaa
      601 cccggcatca gcaaacaacg gctgcaacac cggcagcaag gccaggcaat cggccagggt
      661 cggccgcagc gtttcgccgt aggccatcat ccgcgcaccg tgcatgtccg gcaccatgca
      721 ggccggatcg gcgcgcagcc agcgggcgcc ggcggcatcg ccgacgtctc gctggcgagt
      781 caacgcagcc accggccact gcggcgcggc cacgctgaaa tgacgctgca gctgggcgcg
      841 ctcaccggcg tccagctgca aagcggtggc gcgacccagg gcgcgcgcca cgtcgtccgg
      901 caatgcagcc gccgcaaggc ggct
//
LOCUS       DAOKIP010000418          915 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.428,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000418 DAOKIP010000000
VERSION     DAOKIP010000418.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 915)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 915)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..915
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.428"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..842)
                     /locus_tag="QEL58_004054"
     CDS             complement(<1..842)
                     /locus_tag="QEL58_004054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SirB1 family protein"
                     /protein_id="HDS1678471.1"
                     /translation="MQDRITLPDWDALADLEDEALPLLPTALLIARDEYPDLQPSTYD
                     ALIQSHVDHLRSEVEAIDNSPLKMAAINRHLFDELGYSGDHDEYYDPRNSYLNQVFER
                     RLGNPISLALVQMEVSRRLGIPLDGVSFPGHFLVRLPVDDGVLVMDPFNGGRPLDVDE
                     LRERAKSHLGGQMPDDQVLAQILDPAPARAILMRMLRNLHGVYAEAGEWDRAARSADR
                     LLKLAPEQDDALRDRGLAYLQLEYLAGARHDLGQYLKRNPEASDAQWLRDKLIDLGGP
                     MPRL"
BASE COUNT          141 a          296 c          315 g          163 t
ORIGIN      
        1 tgcagccgcg gcatcggccc gccgaggtcg atcagcttgt cccgcagcca ctgcgcatcg
       61 ctcgcctcgg ggttgcgctt caggtactgg cccaggtcat gacgggcccc ggccaggtac
      121 tccagctgca ggtaggccag gccgcggtcg cgcagggcgt cgtcctgttc cggggccagc
      181 ttgagcagcc ggtcggcact gcgtgcggcg cggtcccatt cgccggcctc ggcatagacg
      241 ccatgcaggt tgcgcagcat gcgcatcagg atcgcgcgcg ccggcgccgg gtcgaggatc
      301 tgcgccagca cctggtcgtc gggcatctgc ccgcccaggt gtgacttggc ccgctcgcgc
      361 agttcatcca cgtccagtgg ccggccgccg ttgaacgggt ccatcaccag cacgccgtca
      421 tccaccggca ggcgcaccag gaagtggccg gggaaagaca cgccatcaag gggaataccc
      481 agccggcgcg agacttccat ctgcaccagg gccagcgaga tcggattgcc caggcggcgc
      541 tcgaacacct ggttgaggta gctgttgcgc gggtcgtagt actcgtcgtg gtcgccgctg
      601 tagcccagct cgtcgaacag gtggcggttg atcgccgcca tcttcaacgg gctgttgtcg
      661 atggcctcca cttccgagcg gaggtggtcg acatggctct ggatcagcgc gtcgtaggtg
      721 gacggctgca gatcggggta ttcatcgcgc gcgatcagca gtgcggttgg caacagcggc
      781 agcgcctcgt cttcgaggtc ggccagtgca tcccagtcgg ggagtgtgat ccggtcctgc
      841 atggtcacag actggcgtca ttcgcagacg gtttcaagcg gtgccgcgtg aaaaattcag
      901 gggtcagatc ccttt
//
LOCUS       DAOKIP010000419          870 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.429,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000419 DAOKIP010000000
VERSION     DAOKIP010000419.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 870)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 870)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..870
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.429"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            91..>870
                     /gene="xth"
                     /locus_tag="QEL58_004055"
     CDS             91..>870
                     /gene="xth"
                     /locus_tag="QEL58_004055"
                     /EC_number="3.1.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005995484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HDS1678472.1"
                     /translation="MKIASWNVNSLNVRLPHLEQWLKAFGPDIVGIQETKLEDHKFPD
                     SALIAAGYRSVFAGQKTYNGVALLSREPAQDVQIGIPGFEDEQKRVIAGTFGDLRVIN
                     LYVVNGQDIGTDKYEYKLRWLEAAHAWIAEEMQRHPKLIVMGDFNIAPDARDVHDPEV
                     WNENHILTSTAERGALNKLLQLGLHDGFRLHNDEAGTFSWWDYRAAGFRRNLGLRIDL
                     TLVSDALKRSAVASGIDREPRTWERPSDHAPAWVEVASSLLD"
BASE COUNT          163 a          287 c          288 g          132 t
ORIGIN      
        1 cggtaggtgc caaccttggt tggcacgcgt gaaccccaag cgccaaccgg ggttggcgtc
       61 taccaaaccc gggccgggta gaatgcccac atgaagatcg cctcgtggaa cgtcaattcg
      121 ctcaatgtcc gcctgccgca cctggagcag tggctcaagg cgttcggccc ggacatcgtc
      181 ggtatccagg aaaccaagct ggaggaccac aagttccccg attcggcgct gatcgccgcc
      241 ggctaccgca gcgtgttcgc cggccagaag acctacaacg gcgtggcgct gctgtcgcgt
      301 gagccggcgc aggacgtgca gatcggcatt cccggcttcg aggacgagca gaagcgtgtc
      361 atcgccggca ccttcggcga cctgcgggtg atcaacctgt acgtggtcaa cggccaggac
      421 atcggcaccg acaagtacga gtacaagctg cgctggctgg aggcggcgca tgcctggatc
      481 gccgaggaaa tgcagcggca cccgaaactg atcgtgatgg gcgacttcaa catcgccccg
      541 gacgcgcgcg acgtgcacga cccggaggtg tggaacgaga accacatcct gacctccacc
      601 gccgagcgcg gcgcgctgaa caagctgctg cagctgggcc tgcacgatgg tttccgcctg
      661 cacaacgacg aggcgggcac cttcagctgg tgggactacc gtgccgcggg cttccgccgc
      721 aatctgggcc tgcgcatcga cctgaccctg gtctccgacg cgctgaagcg cagtgcggtg
      781 gcctcgggca tcgaccgcga gccgcgtacc tgggaacgcc cgagcgacca tgcgccggcc
      841 tgggtggaag tagcgtcgag cttgctcgac
//
LOCUS       DAOKIP010000420          862 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.430,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000420 DAOKIP010000000
VERSION     DAOKIP010000420.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 862)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 862)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..862
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.430"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(261..527)
                     /locus_tag="QEL58_004056"
     CDS             complement(261..527)
                     /locus_tag="QEL58_004056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005000600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mobilization protein"
                     /protein_id="HDS1678473.1"
                     /translation="MSVTEALDSKIKAQEEKLKQLKAQRQAALARERAKEKEQARKDD
                     TRRKILIGSCMLKITEDDEQARAKLIAQMDRYLTDERDRKLFNL"
BASE COUNT          245 a          201 c          155 g          261 t
ORIGIN      
        1 gatgcatgat ttactcattg attgatcatc tactttgaaa aagttcttta ttggatcctt
       61 ccaaccagtc atttgactcc aaggatacca aaaacataaa aaacccaaag tacttaaaat
      121 tccggctaaa tcaaaactct tggataagcc aaatagactt atagcaacag atgctgcacc
      181 taagacaaaa ccaaaccaag atttaatcaa gggagccttg ggagaagtta ttgataaatt
      241 attcatatta gagttctaca ttaaagatta aataactttc tgtctctttc atccgtcaaa
      301 taccggtcca tctgagcgat caatttagcc cgtgcctgtt catcatcttc agtgattttt
      361 aacatacagg atccgatcaa aatcttgcgt ctggtatcgt cctttcgtgc ctgctctttc
      421 tctttggcac gttctcttgc cagtgctgcc tgtctttgag cctttaactg ctttagcttt
      481 tcttcctgtg ccttgatttt gctgtctagt gcttcagtaa cgctcattaa tccaatacca
      541 tcatcctggg aaaccatccc taacataagc gcacttgaat ctgcattcaa ggtgctatat
      601 gtatagtaat gttttcctcg aagagcgcac ttatgcaaac ttcgtttgca agtccgattg
      661 gggtctcccc aataccccga caaccgtatc cacggttgta tttcactacg tgaaaattta
      721 aaagcgaaaa acaggcatgg cgatttacca cttttcagtc aaaaccgtag cacgatcagc
      781 agggcgttcc gctactgctg cgattgccta tcgggcaggt gaaaagatct attgtgaacg
      841 tgagggccga gaacatgatt ac
//
LOCUS       DAOKIP010000421          840 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.431,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000421 DAOKIP010000000
VERSION     DAOKIP010000421.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 840)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 840)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..840
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.431"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(5..>840)
                     /locus_tag="QEL58_004057"
     CDS             complement(5..>840)
                     /locus_tag="QEL58_004057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014037532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDS1678474.1"
                     /translation="LGCIGIGAVGGALLLPKLRAQMDRDLLVLLATLSLALSLVGLAL
                     TRSWYVLPVVMLVNGFAWITVLSSLQIAAQTAVPAWVRARALALYIMVFSAGMAAGGL
                     SWGALAQRTSPELALLVAAAGAVIGGLLVWRVRIAGTEDLNLRPAGHWPAPELSVPVS
                     NDRGPVLVTIEYRIDDADRSAFQAQMRALGTIRRRDGAVVWGVVEDVATPGIHLEYFV
                     TPSWLEHLRQHERITADDKAIQEVLRELHRGERAPVVRHFVGGHDPLPKAGVPHHHSD
                     I"
BASE COUNT          158 a          303 c          267 g          112 t
ORIGIN      
        1 caggtcagat gtcactgtgg tggtgcggaa cgccggcctt gggcagcggg tcatggccgc
       61 ccacgaagtg acgtaccact ggtgcccgtt cgccgcgatg cagttcgcgc agcacctcct
      121 ggatcgcctt gtcatcggcg gtgatgcgtt cgtgctggcg cagatgctcc agccacgacg
      181 gggtcacgaa atactccagg tggatgcccg gcgtcgccac atcctcaacc acgccccaga
      241 ccacggcgcc atcacggcga cggatcgttc ccagcgcgcg catctgcgcc tggaatgcgc
      301 tgcgatcggc atcgtcgatg cggtattcaa tggtcaccag caccgggccg cgatcattgg
      361 acaccggtac tgagagttcc ggtgccggcc agtgcccggc cggacgcagg ttcaggtctt
      421 cagtaccggc gatgcgcacg cgccagacca gcagtccgcc gatcaccgca ccggcagcag
      481 ccaccagcag ggccagctca ggcgaggtgc gctgcgccag cgcgccccag ctcaggccgc
      541 cagcggccat gccggcagag aacaccatga tgtacagcgc cagcgcgcgc gcacgtaccc
      601 acgccggtac cgccgtctgc gcggcgatct gcagcgaaga gagcacggtg atccaggcaa
      661 agccattgac cagcatcacc acgggaagca cgtaccagct gcgggtcagc gccagcccga
      721 ccaggctcaa cgccagcgac agcgtggcca gcagcaccag caggtcgcgg tccatctgtg
      781 cgcgcagctt cggcaacagc agcgcgccgc cgaccgcacc gatgccaatg cagcccagca
//
LOCUS       DAOKIP010000422          836 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.432,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000422 DAOKIP010000000
VERSION     DAOKIP010000422.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 836)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 836)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..836
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.432"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(3..617)
                     /locus_tag="QEL58_004058"
     CDS             complement(3..617)
                     /locus_tag="QEL58_004058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019337590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF938 domain-containing protein"
                     /protein_id="HDS1678475.1"
                     /translation="MSSKPYSEACERNREPIATALDPWMGDRHRLLEIGSGTGQHAAF
                     FAERWPWLRWQPSDHPDHLPGIEAWRAEVALLNLLPPLALQVELPPAPGLSLPQGSTF
                     DAAFSANTLHIMGWEHVQALFSALPPVLRHGALLAVYGPFNYGGRYTSDSNAQFDAWL
                     KARDPRSGIRDSEAVHALAADNGFTRLGDVAMPANNRLLLWRLG"
BASE COUNT          136 a          273 c          302 g          125 t
ORIGIN      
        1 attcagccca gccgccacag cagcaggcgg ttgttggccg gcatcgccac atcgcccagt
       61 cgggtgaacc cgttgtcggc agcaagcgcg tgcaccgctt cgctatcgcg gatgccgctg
      121 cgcggatcac gcgctttcag ccaggcatcg aactgcgcat tgctgtcact ggtgtagcgg
      181 ccgccgtagt tgaacgggcc gtacaccgcc agcagcgcgc catggcgcag caccggtggc
      241 agcgcggaga acagcgcctg cacgtgttcc cagcccatga tgtgcagcgt gttggcgctg
      301 aacgcggcgt cgaatgtgct gccctgcggc aaactcaggc cgggtgccgg cggcagttcc
      361 acctgcagcg ccagcggcgg caacaggttc agcaaggcca cttcggcgcg ccatgcctcg
      421 atgccaggca ggtggtcggg atgatcactg ggctgccagc gcagccacgg ccagcgctcg
      481 gcaaagaacg cggcgtgctg gccggtgccg ctgccgatct ccagcagccg gtggcggtcg
      541 cccatccacg ggtcgagtgc ggtggcgatc ggttcgcggt tgcgctcgca ggcttctgaa
      601 tacggcttgc tcgacatcag gacggtgtcc aggcggggtc ggctccattg tgcacgaggg
      661 gggatgactg agcagggctg cgccctgcac ctgctcagag ccagagccag agccagagcc
      721 ggagccggag ccggagccgg agcaacagca aaggcagaag cgggcttcct gtgggatggc
      781 gggatgggtc cggttgcggg ggacgccgta aacccccctc cggggtccgg cccagc
//
LOCUS       DAOKIP010000423          830 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.433,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000423 DAOKIP010000000
VERSION     DAOKIP010000423.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 830)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 830)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..830
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.433"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(57..>830)
                     /locus_tag="QEL58_004059"
     rRNA            complement(57..>830)
                     /locus_tag="QEL58_004059"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
BASE COUNT          173 a          251 c          206 g          200 t
ORIGIN      
        1 ctctgaatgc aggtactttg tgaagacgcc cgacaggacg atgctgtctt tgctcaaaag
       61 gaggtgatcc agccgcacct tccgatacgg ctaccttgtt acgacttcac cccagtcatc
      121 ggccacaccg tggcaagcgc cctcccgaag gttaagctac ctgcttctgg tgcaacaaac
      181 tcccatggtg tgacgggcgg tgtgtacaag gcccgggaac gtattcaccg cagcaatgct
      241 gatctgcgat tactagcgat tccgacttca tggagtcgag ttgcagactc caatccggac
      301 tgagataggg tttctgggat tggcttaccg tcgccggctt gcagccctct gtccctacca
      361 ttgtagtacg tgtgtagccc tggccgtaag ggccatgatg acttgacgtc atccccacct
      421 tcctccggtt tgtcaccggc ggtctcctta gagttcccac cattacgtgc tggcaactaa
      481 ggacaagggt tgcgctcgtt gcgggactta acccaacatc tcacgacacg agctgacgac
      541 agccatgcag cacctgtgtt cgagttcccg aaggcaccaa tccatctctg gaaagttctc
      601 gacatgtcaa ggccaggtaa ggttcttcgc gttgcatcga attaaaccac atactccacc
      661 gcttgtgcgg gcccccgtca attcctttga gtttcagtct tgcgaccgta ctccccaggc
      721 ggcgaactta acgcgttagc ttcgatactg cgtgccaaat tgcacccaac atccagttcg
      781 catcgtttag ggcgtggact accagggtat ctaatcctgt ttgctcccca
//
LOCUS       DAOKIP010000424          801 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.434,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000424 DAOKIP010000000
VERSION     DAOKIP010000424.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 801)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 801)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..801
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.434"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..>801)
                     /locus_tag="QEL58_004060"
     CDS             complement(<1..>801)
                     /locus_tag="QEL58_004060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDS1678476.1"
                     /translation="QGRSFDLAGCLTVTAGGSLLVTTLVQGPEWGWTAPATLICLLLS
                     AVLLTVFVQIERRSRDPLMQFSLLRLPGLRAALGLTFAFMSSYGVQYYFLALYFQDGY
                     GWSPLQAGMAFLLPTLVCTFGIRIAERMLRCRSPRQVLAWGFAAGAIGIAAVALAMPH
                     GAGYWPLLPGIVVLSIGQGMSWTAMWIVAGQGVPGPQQGVASGMAATAQQIGGALGLA
                     VLVMVANAARGTQAATSPDALQGMVNAQYGAALFAALGVVIALGLRPVA"
BASE COUNT          150 a          285 c          266 g          100 t
ORIGIN      
        1 gctaccgggc gcaggcccag cgcgatcacc acgccaagcg cggcgaacag cgcggcgccg
       61 tactgtgcat tgaccatgcc ctgcagggca tcgggactgg ttgctgcctg cgtgccgcgt
      121 gcggcgttgg cgaccatcac cagtaccgcc aatcccaggg cgccgccgat ctgctgggcg
      181 gtggccgcca tgccggacgc gacaccttgc tgcggacccg gcactccctg cccggccacg
      241 atccacatcg ccgtccagct catgccctgg ccgatgctga gcaccacgat gcccggcagc
      301 agcggccagt agccggcgcc atgcggcatc gccagcgcga ccgcggcgat gccgatggca
      361 ccggcggcga atccccaggc cagcacctgc cgtggcgaac ggcaccgcag catgcgttcg
      421 gcaatacgga tgccgaaggt gcacaccagt gtcggcagca ggaaggccat cccggcctgc
      481 agcgggctcc agccatagcc gtcctggaaa tacagcgcca ggaagtagta ctgcacgcca
      541 tagctgctca tgaaggcgaa ggtcaggccg agtgccgcgc gcaggccagg caggcgcaac
      601 agcgaaaact gcatcagcgg gtctcggctg cgcctttcga tctgtacgaa caccgtcaac
      661 agtacggctg aaagcagcag gcagatgagc gtggccggcg ccgtccagcc ccactccggg
      721 ccctgaacca gggtggtaac cagcaggctg ccgccggcgg tgacggtgag gcaaccggcc
      781 aggtcgaatg aacggccctg c
//
LOCUS       DAOKIP010000425          774 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.435,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000425 DAOKIP010000000
VERSION     DAOKIP010000425.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 774)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 774)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..774
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.435"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            55..762
                     /locus_tag="QEL58_004061"
     CDS             55..762
                     /locus_tag="QEL58_004061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDS1678477.1"
                     /translation="MTDRIPLLLLPGLLNDAELWRAQLADLADIADCTVGDQTRGETL
                     QAVAEDVLAQAPERFALAGFSLGGFVAQQILRIAPERVLQLALIDTSIHADSPERAEQ
                     RRSQRASVRLPGKFHGFGDVLMRSYIDASRLDDYVLVQRVRDMTARLGAEVFLRQSAL
                     ERRDGHDVLAGYRDPLLIVCGANDRITPLAVSEEMHALVPHSQLVVVPDCGHLAPMEK
                     PDEVSAAMRGWLLQDEE"
BASE COUNT          129 a          252 c          259 g          134 t
ORIGIN      
        1 ccaatgaccc gatgcggcat ggctccgtca ccgtactggc gcgacaatac cgccatgacc
       61 gaccgcattc ccttgctgct gctacccggc ctgctcaacg atgccgagct gtggcgcgcc
      121 cagctggccg acctggccga tatcgccgac tgcacggtgg gcgaccagac ccgtggcgaa
      181 accctgcagg cggttgccga agacgtgctg gcgcaggcac cggagcggtt tgcgctggcc
      241 ggcttctcac tgggtggttt cgtcgcccag cagatcctgc gtatcgctcc ggagcgggta
      301 ctgcagctgg cattgatcga cacctcgatc catgccgatt cgcccgagcg cgccgaacag
      361 cgccgcagcc aacgtgccag cgtgcgccta ccggggaaat tccatggctt cggtgacgta
      421 ctgatgcgca gctatatcga tgcctcccgg ctggacgact atgtgctggt tcagcgcgtg
      481 cgcgacatga ccgcacggct gggcgccgaa gtgttcctgc gccagagcgc gctggagcgc
      541 cgcgatgggc atgacgtgct ggcgggttat cgcgacccgc tgctgatcgt gtgcggtgcc
      601 aacgaccgca tcacgccgct ggcagtgagc gaggaaatgc acgcgctggt gccgcactcg
      661 caactggtgg tggtgcccga ttgcgggcac ctggcaccga tggaaaagcc ggatgaagtg
      721 agcgccgcca tgcgtggctg gttgctgcag gacgaggaat aacccctgca cttg
//
LOCUS       DAOKIP010000426          768 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.436,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000426 DAOKIP010000000
VERSION     DAOKIP010000426.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 768)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 768)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..768
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.436"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            30..>768
                     /locus_tag="QEL58_004062"
     CDS             30..>768
                     /locus_tag="QEL58_004062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014645554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridylate synthase"
                     /protein_id="HDS1678478.1"
                     /translation="MSTEPDTLAAVETETAPLQLLHLDERLAVVNKPAGLMVHDSKLA
                     RGEDDFLADRLREQLGRPIFLVHRLDRATSGCLLLAFDRDTASALGKALMGGEVLKDY
                     LTVCRGWPAELSWQVDHDLDGGPGKPVKKPAITDFQRLATGELSVPIGEFSSSRYALL
                     RCQPQTGRFRQIRRHLKHLSHHMIGDTSHGDGRHNRIFRMQGVHRMLLHAERLRFPHP
                     DGGVVDVRAPLDAGFQKALDLFGWQVDT"
BASE COUNT          123 a          269 c          254 g          122 t
ORIGIN      
        1 attcagtgcc cagccccgat aatcccgcgg tgagcaccga acctgacacc ctcgctgcgg
       61 tcgagaccga aaccgcaccc ctgcagctgc tgcacctgga tgagcgcctg gccgtggtca
      121 acaagccggc cgggctgatg gtccacgaca gcaagctggc ccgtggcgaa gacgatttcc
      181 tggccgaccg cctgcgcgag cagctgggcc gcccgatctt cctggtccat cgcctggacc
      241 gggcgaccag tggctgcctg ctgctggcct tcgaccgcga taccgccagc gcgctgggca
      301 aggcgctgat gggcggcgaa gtgctgaagg actacctgac cgtgtgccgg ggctggccgg
      361 ccgagctctc ctggcaggtc gaccatgatc tggacggcgg cccgggcaag ccggtaaaga
      421 aaccggccat caccgatttc cagcgcctgg ccaccggcga gctgtcggtg ccgatcggcg
      481 agttcagcag ttcgcgttat gcgttgctgc gctgccagcc gcagaccggg cgcttccggc
      541 agatccgtcg ccacctcaag cacctgtcgc accacatgat cggcgacacc agccacggtg
      601 atggccgcca caaccgcatc ttccgcatgc agggcgtgca ccgcatgctg ctgcacgccg
      661 agcgcctgcg gttcccgcat cccgacggtg gcgttgtgga tgtacgcgcg ccgctggacg
      721 ctgggttcca gaaggcgctg gacctgttcg gctggcaggt ggataccg
//
LOCUS       DAOKIP010000427          764 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.437,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000427 DAOKIP010000000
VERSION     DAOKIP010000427.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 764)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 764)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..764
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.437"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            <1..>764
                     /locus_tag="QEL58_004063"
     CDS             <1..>764
                     /locus_tag="QEL58_004063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004282204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="RepB family plasmid replication initiator
                     protein"
                     /protein_id="HDS1678479.1"
                     /translation="YINQFGVHRNTAYQALKDACDDLFARQFSYQSLSEKGNVINHKS
                     RWVSEVAYIDNEAVVRLIFAPAIVPLITRLEEQFTKYEIQQISNLTSAYAVRLYEILI
                     AWRSTGKTPLITIYDFRQKIGVLETEYKRMYDFKKYVLDIALKQVNEHTDINVKVEQH
                     KTGRSITGFSFSFKQKKSATNTANDISQDKELKINLTDAQRYLFASKLSELPEMAKLS
                     QGNESYEQFAARIVTMLQEPNKLKEFMPLLRKVGFQ"
BASE COUNT          278 a          124 c          137 g          225 t
ORIGIN      
        1 ttatatcaat caatttggtg tacatcgaaa tactgcttat caagccttaa aagatgcttg
       61 cgatgaccta tttgcaagac aattcagtta tcaaagtctt agtgaaaaag gtaatgttat
      121 taatcacaag tcaagatggg taagcgaggt tgcttatatt gataatgagg ctgtcgttag
      181 acttattttt gctcctgcta ttgtgccttt aataactcga ttagaagaac aatttacaaa
      241 gtatgagata cagcaaataa gcaatttaac gagtgcttat gctgttcgct tatatgaaat
      301 attgattgcg tggcgtagta ccggaaaaac gcctcttata actatctacg atttcagaca
      361 aaaaataggt gtactcgaga ctgaatacaa aaggatgtac gattttaaga aatatgtttt
      421 agacattgca ttaaagcaag taaatgaaca taccgatatt aatgtcaaag ttgaacaaca
      481 taaaaccggc agatccatta cgggcttttc atttagcttc aaacagaaaa agtcagcaac
      541 aaatacagcc aatgacatta gtcaggacaa agagctaaaa atcaatttga ctgatgcaca
      601 acgatattta tttgctagta aattatcaga acttcctgag atggctaaac tttcacaagg
      661 taatgaaagc tatgaacagt ttgctgctcg gattgtaacc atgctacaag agccaaataa
      721 attaaaagaa tttatgccat tacttcgaaa agtcggcttt caat
//
LOCUS       DAOKIP010000428          757 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.438,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000428 DAOKIP010000000
VERSION     DAOKIP010000428.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 757)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 757)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..757
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.438"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            8..733
                     /locus_tag="QEL58_004064"
     CDS             8..733
                     /locus_tag="QEL58_004064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014646370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enolase"
                     /protein_id="HDS1678480.1"
                     /translation="MIHHTELRDLLPGMVPFPTDVFPTDQAWLGQHLLPLLKIDLGVL
                     RPELAGQVATMLCPIEPYDGCIGETTEEHHNAFTGTNWIAFELTDGNEMRFLGNEGYF
                     IGDAVDDKDAQEHIAQMRESYGKARDYHATHGRLACYSRFGKGEASERDYLDTLGGPI
                     GFGNWTETAEIPAAFALAFTEAADDPNAAEDAETVIITRDGNKFFAVADVAGYNWCAT
                     GADAIVMLYEPVSRTVLFSYDWS"
BASE COUNT          144 a          255 c          239 g          119 t
ORIGIN      
        1 gactgacatg atccaccaca ccgaactgcg cgacctgctg cccggcatgg tccccttccc
       61 caccgatgtc ttccccaccg accaggcctg gctcggccag cacctgctgc cgctgctgaa
      121 gatcgacctg ggcgtgctgc gcccggaact ggccggccag gtggcgacga tgctgtgccc
      181 gatcgagccg tatgacggct gtatcggcga gaccaccgaa gaacaccaca acgcgttcac
      241 cggcaccaac tggattgcct tcgaactgac cgacggcaac gagatgcgct tcctcggcaa
      301 cgagggctat ttcatcggtg atgcagtgga cgacaaggac gcgcaggaac acatcgcgca
      361 gatgcgcgag agctacggca aggcgcgcga ctaccacgcc acgcatggcc ggctggcctg
      421 ctactcgcgc ttcggcaagg gcgaagccag cgagcgcgat tatctggata cgctgggtgg
      481 cccgatcggg ttcggaaact ggaccgagac cgcggagatt cctgcggcct tcgcgctggc
      541 cttcaccgaa gccgccgatg accccaacgc tgcggaggat gccgaaacgg tgatcatcac
      601 ccgcgacggc aacaagttct tcgccgtggc cgacgtggcc ggctacaact ggtgcgccac
      661 cggcgccgat gcgatcgtga tgctgtacga accggtaagc cgcacggtgc tgttctcgta
      721 cgactggtcg taagcccctg gtagggccgg ccgctgg
//
LOCUS       DAOKIP010000429          744 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.439,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000429 DAOKIP010000000
VERSION     DAOKIP010000429.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 744)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 744)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..744
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.439"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            8..727
                     /locus_tag="QEL58_004065"
     CDS             8..727
                     /locus_tag="QEL58_004065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005408509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HDS1678481.1"
                     /translation="MAIAPAPRSPKKRAPLYEEVAEHVRERIYDYRLPPGEWIDEPAL
                     CEELGISRTPLREALKLLAAEGLVQIDAGRGARVTRLTLEDLNQLFPVMAMLEGRCAH
                     EAVRHIDDAGVQQLEALHAAMEAAATEGNIAEYYRNNYLIHETVQHYAGNPWLIRITH
                     DLHRILKMHRGRQLLTPGRTAQSLAEHRELMECFRRRDAQAAERTMERHLLSQGQALA
                     AYVAAGGLLNVPAPLPTAGGG"
BASE COUNT          129 a          251 c          254 g          110 t
ORIGIN      
        1 ttccaccatg gccattgccc ctgctccacg gtccccgaag aagcgcgccc ctctgtatga
       61 agaggtggcc gagcatgtgc gcgagcgtat ctacgattac cggctgccgc cgggtgagtg
      121 gatcgacgag cccgcgctgt gcgaggaact gggcatcagc cgcaccccgc tgcgcgaagc
      181 gctgaagctg ctggccgccg agggcctggt gcagatcgat gccgggcgtg gcgcgcgggt
      241 cacccggctc acgctggaag acctcaacca gctgttcccg gtgatggcga tgctggaagg
      301 tcgctgcgcg catgaagctg tcaggcatat cgacgatgcc ggcgtgcagc agctggaagc
      361 gttgcacgcg gcgatggaag cggcggcgac cgagggcaac atcgccgagt actaccggaa
      421 caactacctg atccacgaaa ccgtgcagca ctacgccggc aacccgtggc tgatccgcat
      481 cacccatgac ctgcaccgca tcctgaagat gcatcgcggc cgccagctgc tgaccccggg
      541 ccgtaccgcg cagtcgctgg ccgaacaccg cgaactgatg gagtgcttcc gccgccgcga
      601 cgcgcaggcc gctgaacgca ccatggagcg ccatctgctg agccagggcc aggcattggc
      661 tgcctatgtg gcagcgggcg ggctgctgaa cgtgccggcg ccgttgccga ccgcaggcgg
      721 cggctgagcg ggctgtcgtc gcct
//
LOCUS       DAOKIP010000430          743 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.440,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000430 DAOKIP010000000
VERSION     DAOKIP010000430.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 743)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 743)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..743
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.440"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..652)
                     /locus_tag="QEL58_004066"
     CDS             complement(<1..652)
                     /locus_tag="QEL58_004066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDS1678482.1"
                     /translation="MAWIYNSSMSSPVLPWNGTLLLDGHVAMLQGHAGGSAAHAHYAH
                     QLLLSDGAAWQVEVDGVRQQGQRLWLPSFQSHAILSAPQDGCTVFLEPAHADPTQIQR
                     YLHALPGNAVALQDWLPRLSRPQPLDRRVQAALARITHYLPGPVPAADIAEAAHLSTS
                     QLHRRFQSDLSVTLRGWVLWQRLRNALAHHLRGHSLTDSAHAAGFADLAHLSRNLHR"
BASE COUNT          140 a          218 c          259 g          126 t
ORIGIN      
        1 tgcggtgcag gttgcgtgac agatgggcca ggtcggcgaa cccggccgcg tgggcgctgt
       61 cggtcaggct gtgtccacgc agatgatgcg cgagcgcatt gcgcagtcgc tgccacagta
      121 cccagccgcg cagggtcacc gacaggtctg actggaagcg ccgatgcaac tggctggtcg
      181 acaggtgggc cgcttcggcg atatcggcgg ccggcaccgg gccaggcagg tagtgggtga
      241 tacgggccag tgccgcctgc acgcgtcgat ccagcggctg cggacggctc agtcgtggca
      301 gccagtcctg cagtgccacc gcgttgcccg gcagggcgtg cagataccgt tggatctgtg
      361 tgggatcggc atgtgccggc tcaaggaata ccgtgcaacc gtcctgtggt gccgacagga
      421 tggcatgcga ttggaaggaa ggcagccaca ggcgttgacc ctgctgccgc acgccatcaa
      481 cctcgacctg ccacgctgca ccgtcgctca gcagcagttg atgggcgtag tgcgcatgcg
      541 cagcgctgcc accggcatgg ccctgcagca tggctacgtg gccatccagc agcagcgtgc
      601 cattccaggg caggacggga gaggacatgg aggaattgta gatccacgcc atgcgtggat
      661 gaatctacat cgaaatcgat taattcgacg attgatcgaa gagcatccac gcatggcgtg
      721 gatctactgc agattgcggc gaa
//
LOCUS       DAOKIP010000431          740 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.441,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000431 DAOKIP010000000
VERSION     DAOKIP010000431.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 740)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 740)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..740
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.441"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            <1..>740
                     /locus_tag="QEL58_004067"
     CDS             <1..>740
                     /locus_tag="QEL58_004067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003486726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HDS1678483.1"
                     /translation="STAHVEYESPVRHYAHVDCPGHADYVKNMITGAAQMDGAILVCS
                     AADGPMPQTREHILLSRQVGVPYIVVFLNKADMVDDAELLELVEMEVRELLSKYDFPG
                     DDTPIIAGSARLALEGDQSDIGVPAILKLVDALDSWIPEPERAIDKPFLMPVEDVFSI
                     SGRGTVVTGRIERGVIKVGDEIEIVGIRPVQKTTVTGVEMFRKLLDQGQAGDNAGLLL
                     RGTKRDDVERGQVLAKPGSIKPHTKFEG"
BASE COUNT          138 a          238 c          245 g          119 t
ORIGIN      
        1 tcgaccgcgc acgtcgaata cgaatccccg gtccgtcact acgcccacgt cgattgcccg
       61 ggccacgctg actacgtcaa gaacatgatc accggtgccg cccagatgga cggcgcgatc
      121 ctggtgtgct cggccgctga cggcccgatg ccgcagaccc gcgagcacat cctgctgtcg
      181 cgtcaggtcg gcgtgccgta catcgtcgtg ttcctgaaca aggccgacat ggttgacgac
      241 gccgagctgc tcgagctggt cgagatggaa gtgcgcgagc tgctgagcaa gtacgacttc
      301 ccgggcgacg acaccccgat catcgctggt tcggcccgtc tggcgctgga aggcgaccag
      361 agcgacatcg gcgtgccggc catcctgaag ctggtcgacg ccctggacag ctggatcccg
      421 gagccggagc gcgcaatcga caagccgttc ctgatgccgg tggaagacgt gttctcgatc
      481 tcgggccgcg gcaccgtggt gaccggtcgt atcgagcgcg gcgtgatcaa ggttggcgac
      541 gaaatcgaaa tcgtcggcat ccgtccggtg cagaagacca ccgtgaccgg cgttgaaatg
      601 ttccgcaagc tgctggacca gggtcaggca ggcgacaacg ctggcctgct gctgcgcggc
      661 accaagcgtg acgacgtcga gcgtggccag gtcctggcca agccgggttc gatcaagccg
      721 cacaccaagt tcgaaggcga
//
LOCUS       DAOKIP010000432          718 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.442,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000432 DAOKIP010000000
VERSION     DAOKIP010000432.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 718)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 718)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..718
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.442"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..698)
                     /locus_tag="QEL58_004068"
     CDS             complement(<1..698)
                     /locus_tag="QEL58_004068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005412355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA pseudouridine synthase"
                     /protein_id="HDS1678484.1"
                     /translation="MLSKAGVCSRSEAARWIAEGRVRVSGRIVRDPEFPIGQPAPPIE
                     LDGQPLAAPQRLYLMLNKPRGVVTTVQDERGRDTVYRCFDGAGLPWIAPVGRLDKASE
                     GLLLFSNDPQWAARLTDPQTGPIKTYHVQVDGLPDDATLAALQAGVEDEGEFLAAQAV
                     RVLRSGDKTAWLEVVLDEGRNRHIRRLLAAFDLQVLRLVRVAIGGLLLGDLGKGQWRV
                     LEVSDQQRLGAAAPG"
BASE COUNT          111 a          272 c          237 g           98 t
ORIGIN      
        1 cccggtgcag cggcccccag ccgctgctgg tcgctgacct ccagaacccg ccactggccc
       61 ttgccgagat cgccgagcag cagcccaccg atcgcgaccc ggaccaggcg cagcacctgc
      121 aggtcgaagg ccgccaacag gcggcggata tgacggttgc ggccctcgtc gaggaccacc
      181 tccagccatg cggtcttgtc gccactgcgc agcacgcgca cggcctgggc agcgaggaac
      241 tcgccctcgt cctccacgcc ggcctgcagt gccgccaggg tggcgtcatc gggcaggcca
      301 tccacctgca cgtggtaggt cttgatcggc ccggtctgcg gatcggtcag gcgcgcggcc
      361 cactgcggat cattgctgaa cagcagcagc ccttcgctgg ccttgtccaa ccgcccgacc
      421 ggtgcgatcc acggcaggcc ggcaccatca aagcagcgat acacggtgtc gcgaccgcgc
      481 tcatcctgca cggtggtcac caccccgcgc ggcttgttga gcatcaggta caggcgttgt
      541 ggcgctgcca gcggctggcc gtcgagctcg atcggcggtg ccggctggcc aatcgggaac
      601 tccggatcgc ggacgatgcg gccggacacc cgcacgcggc cttcggcgat ccagcgcgcg
      661 gcctcgctgc gcgagcacac gccggccttg gacagcacgc gcgccagacc atggcgca
//
LOCUS       DAOKIP010000433          693 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.443,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000433 DAOKIP010000000
VERSION     DAOKIP010000433.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 693)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 693)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..693
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.443"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            43..>693
                     /locus_tag="QEL58_004069"
     CDS             43..>693
                     /locus_tag="QEL58_004069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016851096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YitT family protein"
                     /protein_id="HDS1678485.1"
                     /translation="MVTAGPLTPPPDSAGTTADETALRHSIAEDVQGMVLATMVASLG
                     LAIFAKSGLMIGGMAGMAFLLHYALDWNFGVVFVLVNLPFYWVALRRMGWEFTLKTFA
                     AVTACGVLTDLLPRWIDFSHIHPLYSAIVGGALSGLGILFFIRHRASLGGIGILAVYL
                     QRTRGWSAGKVQMSYDACLMVAAFFVLSPSKVLYSAIGAVVLSLVLMFNHRPGRYMG"
BASE COUNT           91 a          242 c          224 g          136 t
ORIGIN      
        1 gaatcccatg gccccgcgcc gtgcgacgac gctgacggcc acctggtcac cgccggtccg
       61 ctgaccccgc cgcccgacag tgccggtacc accgccgacg aaactgcact gaggcactcg
      121 atcgccgagg acgtgcaggg catggtgctg gccacgatgg tggcctcgct gggcctggcc
      181 atcttcgcca agagtgggct gatgatcggc ggcatggccg gcatggcctt cctgctgcac
      241 tacgcgctgg actggaactt cggcgtggtg ttcgtactgg tcaatctgcc cttctactgg
      301 gtggcgctgc gacgcatggg ctgggaattc accctgaaga cctttgccgc ggtcaccgcc
      361 tgcggcgtgc tgaccgacct gctgccgcgc tggatcgatt tctcgcatat ccacccgctg
      421 tactcggcca tcgtcggcgg cgccttgtcc ggcctgggca tcctgttctt catccgccac
      481 cgtgccagcc tcggcggcat cggcatcctg gcggtgtacc tgcagcgcac ccgcggctgg
      541 agcgcgggca aggtgcagat gtcctacgac gcctgcctga tggtggccgc gttcttcgtg
      601 ctgtcgccct cgaaagtgct gtactcggcc atcggcgcgg tggtgctcag cctggtgctg
      661 atgttcaacc accgccccgg ccgttacatg ggc
//
LOCUS       DAOKIP010000434          617 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.444,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000434 DAOKIP010000000
VERSION     DAOKIP010000434.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 617)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 617)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..617
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.444"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..>617)
                     /locus_tag="QEL58_004070"
     rRNA            complement(<1..>617)
                     /locus_tag="QEL58_004070"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
BASE COUNT          123 a          201 c          140 g          153 t
ORIGIN      
        1 gcagttccca ggttgagccc agggctttca caacggactt aaataaccac ctacgcacgc
       61 tttacgccca gtaattccga gtaacgcttg cacccttcgt attaccgcgg ctgctggcac
      121 gaagttagcc ggtgcttatt ctttgggtac cgtcatccca accaggtatt agccggctgg
      181 atttctttcc caacaaaagg gctttacaac ccgaaggcct tcttcaccca cgcggtatgg
      241 ctggatcagg cttgcgccca ttgtccaata ttccccactg ctgcctcccg taggagtctg
      301 gaccgtgtct cagttccagt gtggctgatc atcctctcag accagctacg gatcgtcgcc
      361 ttggtgggcc tttaccccgc caactagcta atccgacatc ggctcattca atcgcgcaag
      421 gtccgaagat cccctgcttt cacccgtagg tcgtatgcgg tattagcgta agtttcccta
      481 cgttatcccc cacgaaaaag tagattccga tgtattcctc acccgtccgc cactcgccac
      541 ccaaggagca agctcctctg tgctgccgtt cgacttgcat gtgttaggcc taccgccagc
      601 gttcactctg agccagg
//
LOCUS       DAOKIP010000435          596 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.445,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000435 DAOKIP010000000
VERSION     DAOKIP010000435.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 596)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 596)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..596
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.445"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(51..575)
                     /locus_tag="QEL58_004071"
     CDS             complement(51..575)
                     /locus_tag="QEL58_004071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010364196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1678486.1"
                     /translation="MRSLLQPLALTGLSLALAACVSSAPPVAKPPVDTTTPAQRLAAV
                     DAAAGPDDKELSVQPLRDSQVEDLRVTAQAQRQANDLAAAASSLDHALEIVAGDPAVL
                     QERAELALLQGQWEQAETFARKAIDLGSKTGPLCRRHWATIEQSRLARGEKENAVSAH
                     AQLEGCTVPGIKRY"
BASE COUNT           83 a          225 c          193 g           95 t
ORIGIN      
        1 ttacacggcc aagcggcaag ccacgagggg ctgcgccgtt ggctggaaat ctagtaccgc
       61 ttgatccccg gcacggtgca gccttccagc tgcgcatgcg ccgacaccgc attctccttc
      121 tcgccgcgcg ccaggcgcga ctgctcgatc gtcgcccagt gccggcggca cagcggcccc
      181 gtcttcgaac ccagatcgat cgccttgcgt gcgaacgtct ccgcctgctc ccactggccc
      241 tgcagcagcg ccagctcggc acgttcctgc agcaccgccg gatcacccgc cacgatctcc
      301 agcgcatggt ccaggctgct ggccgcggcg gccagatcat tggcctgtcg ctgcgcctgc
      361 gcggtcaccc gcagatcttc aacctgcgaa tcgcgcagcg gctgcaccga cagctccttg
      421 tcgtccgggc cggcggcggc gtccacggcg gccaggcgct gcgccggcgt ggtggtatca
      481 accggcggct tggccaccgg cggtgcgctg ctcacgcacg cggccaaggc caggctgagg
      541 ccggtcaggg ccaggggctg cagcagggat cgcatgttca tcggcatcat cggctt
//
LOCUS       DAOKIP010000436          590 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.446,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000436 DAOKIP010000000
VERSION     DAOKIP010000436.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 590)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 590)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..590
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.446"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            99..554
                     /locus_tag="QEL58_004072"
     CDS             99..554
                     /locus_tag="QEL58_004072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005421298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HDS1678487.1"
                     /translation="MDRPLDERTVLQMQLSSGLLYAGRQWQRLADSRLGSYGISTACT
                     MPLLMIGRSGGGIRQVALAQQLGMEGPSLVRLLDKLCASDLVRRESDASDRRANLLWL
                     TDAGQALVSELEDQLIGLRQDVFGELSMDELHAVLKAWRLLAEAADRIT"
BASE COUNT          104 a          205 c          181 g          100 t
ORIGIN      
        1 cgtagcaacg tggcgcaacg cttttcctca ctacaccccc gcccattcat aaaaacctat
       61 tgataggaat gaaattagta gtatcctatc tatctcttat ggaccgaccc ctcgacgagc
      121 gcaccgtgct gcagatgcag ctcagctccg gcctgctgta cgcagggcgg cagtggcagc
      181 gcctggccga cagccgcctg ggcagctacg gcatctccac cgcctgcacc atgccgctgc
      241 tgatgatcgg ccgctccggc ggtggcatcc gccaggtggc gctggcccag cagctgggca
      301 tggaggggcc ttcgctggtg cgcctgctgg acaagctgtg cgccagcgac ctggtccgcc
      361 gcgagagcga cgccagcgac cgccgtgcca acctgctgtg gctgaccgac gccggccagg
      421 ctctggtcag cgagctggaa gaccagttga tcggcctgcg ccaggacgta ttcggcgagc
      481 tttccatgga tgaactgcac gccgtgctga aggcatggcg cctgctggcc gaggccgccg
      541 accgcattac gtaagaccgc tgcccccgaa caccgccgct gccgtgcaca
//
LOCUS       DAOKIP010000437          587 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.447,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000437 DAOKIP010000000
VERSION     DAOKIP010000437.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 587)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 587)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..587
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.447"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            <1..289
                     /locus_tag="QEL58_004073"
     rRNA            <1..289
                     /locus_tag="QEL58_004073"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
     gene            480..>587
                     /gene="rrf"
                     /locus_tag="QEL58_004074"
     rRNA            480..>587
                     /gene="rrf"
                     /locus_tag="QEL58_004074"
                     /product="5S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00001"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00001"
BASE COUNT          170 a          140 c          141 g          136 t
ORIGIN      
        1 ctaccgtggg cgctggaaat ttgagaggat ctgctcctag tacgagagga ccagagtgga
       61 cgaacctctg gtgtaccggt tgtgacgcca gtcgcatcgc cgggtagcta tgttcggaag
      121 ggataaccgc tgaaagcatc taagcgggaa gcctacctca agataagatt tccccgtgac
      181 tttatgtcac ctaaagagcc gttcaagacc aggacgttga taggttggat gtggaagcat
      241 agtgatatgt gaagctgacc aatactaatt gctcgtgagg cttgactata caacacccaa
      301 acagttgtat acaaagcatc aatcgattca taaatatgca atatcccttg attcagccta
      361 atgctggaac atacaattca gacccagatc tgcccgctgt taataactca tttggaccaa
      421 agtacggcac atactgcacc gcagttaaat cagacccgaa caagtccatc aacagttgtg
      481 ctggcgacca tagcaagagt gaaccacctg atcccttccc gaactcagaa gtgaaacctc
      541 ttagcgctga tggtagtgtg gggttaccca tgtgagagta agtcatc
//
LOCUS       DAOKIP010000438          573 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.448,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000438 DAOKIP010000000
VERSION     DAOKIP010000438.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 573)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 573)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..573
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.448"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(7..>573)
                     /locus_tag="QEL58_004075"
     CDS             complement(7..>573)
                     /locus_tag="QEL58_004075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007972397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpW family protein"
                     /protein_id="HDS1678488.1"
                     /translation="PAMAQSKGDWTVSAGVHQVAPKSNNGWLANGTLKVDVDNDVKPT
                     ITGEYFIADNLGIEVLAALPFKHDININGLGRVGSTKQLPPVVTLQYHFNSKGKVSPF
                     IGAGVNYTTFFSEDTTGALKDSRLKLQDSWGLAAHVGVDFAISEKGALRVDMRWIDID
                     SKVKLNGEKIGTVNIDPLVYGASYVFKF"
BASE COUNT           89 a          183 c          182 g          119 t
ORIGIN      
        1 caccgcttag aacttgaaga cgtaggacgc gccgtagacc agcgggtcga tgttgaccgt
       61 gccgatcttc tcgccgttca acttcacctt gctgtcgatg tcgatccagc gcatgtccac
      121 gcgcagggcg cccttctcgc tgatcgcgaa gtccacgccc acatgcgcgg ccaggcccca
      181 cgaatcctgc agcttcaggc ggctgtcctt cagcgcaccg gtggtgtctt cgctgaagaa
      241 ggtcgtgtag ttcacgcccg caccgatgaa cggcgacacc ttgcccttgc tgttgaagtg
      301 gtactgcagg gtcaccaccg gcggcagctg cttggtgctg ccgacgcggc cgaggccgtt
      361 gatgttgatg tcgtgcttga acggcagcgc ggccagcact tcgatgccca ggttgtcggc
      421 gatgaagtac tcaccggtga tggtcggctt gacgtcgttg tcgacgtcga ccttcagggt
      481 gccgttggcc agccagccgt tgttcgactt cggcgccacc tggtgcacgc cggccgaaac
      541 ggtccagtcg cccttggact gggccatggc ggg
//
LOCUS       DAOKIP010000439          570 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.449,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000439 DAOKIP010000000
VERSION     DAOKIP010000439.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 570)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 570)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..570
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.449"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            <1..>570
                     /locus_tag="QEL58_004076"
     rRNA            <1..>570
                     /locus_tag="QEL58_004076"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT          148 a          135 c          168 g          119 t
ORIGIN      
        1 cttccaggaa aagctcctaa gcttcagctt acgcagaccg taccgtaaac cgacacaggt
       61 gggtaggatg agaattctca ggcgcttgag agaactcggg tgaaggaact aggcaacatg
      121 gcaccgtaac ttcgggagaa ggtgcaccct ttttggtggc tcgtgcgagc tatagctgaa
      181 gagggtcgca gtaaccaggc cgctgcgact gtttatcaaa aacacagcac tctgcaaaca
      241 cgaaagtgga cgtatagggt gtgacgcctg cccggtgctg gaaggttaat tgatggggtc
      301 agccgcaagg cgaagctctt gatcgaagcc ccagtaaacg gcggccgtaa ctataacggt
      361 cctaaggtag cgaaattcct tgtcgggtaa gttccgacct gcacgaatgg cgtaacgaca
      421 gcggcgctgt ctccacccga gactcagtga aattgaaatc gctgtgaaga tgcagcgttc
      481 ccgtggcaag acggaaagac cccgtgaacc tttactatag ctttacactg aacgttgagt
      541 tcgtctgtgt aggataggtg ggaggctatg
//
LOCUS       DAOKIP010000440          494 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.450,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000440 DAOKIP010000000
VERSION     DAOKIP010000440.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 494)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 494)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..494
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.450"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            55..>494
                     /locus_tag="QEL58_004077"
     CDS             55..>494
                     /locus_tag="QEL58_004077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019237831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2147 domain-containing protein"
                     /protein_id="HDS1678489.1"
                     /translation="MRKTFKTLLLALPLCLAALSAQAADGAAGRWKTIDDKTGKVKSI
                     VEITQAANGTLTGKVVDILHSDKGPNPVCDGCEGANKNKPVKGMTILWNLKADGANKW
                     SGGTILDPANGKTYKSKMELQPGGTKLDVSGCIAFICRAQTWQR"
BASE COUNT          108 a          167 c          154 g           65 t
ORIGIN      
        1 gtatacagtc gacccgtacc ggcatcgtgc cggaatgaac cctgggaggg gaccatgcgc
       61 aagaccttca agaccctgct gctggcgctg ccgctgtgcc tggccgcgct ctcggcgcag
      121 gccgccgacg gcgccgccgg ccgctggaag accatcgacg acaagaccgg caaggtgaag
      181 tcgatcgtcg agatcaccca ggccgccaat ggcaccctga ccggcaaggt ggtcgacatc
      241 ctgcactcgg acaagggtcc caacccggtc tgcgacggct gtgaaggcgc caacaagaac
      301 aagccggtaa agggcatgac catcctctgg aacctgaagg ccgacggcgc caacaagtgg
      361 tccggtggca ccatcctcga cccggccaac ggcaagacct acaagtcgaa gatggaactg
      421 cagccaggtg gcaccaagct ggacgtatcc ggctgcatcg ccttcatctg ccgcgcgcag
      481 acctggcagc gcga
//
LOCUS       DAOKIP010000441          464 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.451,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000441 DAOKIP010000000
VERSION     DAOKIP010000441.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 464)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 464)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..464
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.451"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            7..243
                     /locus_tag="QEL58_004078"
     CDS             7..243
                     /locus_tag="QEL58_004078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005416652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RebB family R body protein"
                     /protein_id="HDS1678490.1"
                     /translation="MAAWPATGYLLDAASAGSGLAIALAPSFAMSATYLAMADSLGLA
                     MQNAVANQQRGQVTAGASLAQVLALIIQKGAVPS"
     gene            240..>464
                     /locus_tag="QEL58_004079"
     CDS             240..>464
                     /locus_tag="QEL58_004079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005416653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RebB family R body protein"
                     /protein_id="HDS1678491.1"
                     /translation="MSSENTVNSQIVDSVSAASTLLVAQGPAQSFSMLDMVMLETLGT
                     AMHNAVARQQGAGMVSNAAVTAACAKMINAP"
BASE COUNT           77 a          170 c          148 g           69 t
ORIGIN      
        1 tgtctgatgg ccgcatggcc tgccaccggc tacctgctgg acgctgccag cgccggctcg
       61 ggcctggcga tcgccctcgc cccgtcgttc gcgatgtccg ccacttacct ggcgatggcc
      121 gacagccttg gcctggccat gcagaacgca gtggccaacc agcaacgcgg ccaggtcacc
      181 gccggcgcca gcctggccca ggtcctggcc ctgatcatcc agaagggagc cgttccatca
      241 tgagcagtga gaacaccgtc aacagccaga tcgtcgacag cgtcagtgcc gcctcgaccc
      301 tgctggtggc ccaggggccg gcgcagtcct tcagcatgct cgacatggtc atgctggaga
      361 cgctgggcac ggccatgcac aacgcggttg cgcgccagca gggcgcgggc atggtcagca
      421 acgccgcggt caccgccgcc tgcgcgaaga tgatcaatgc cccc
//
LOCUS       DAOKIP010000442          449 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.452,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000442 DAOKIP010000000
VERSION     DAOKIP010000442.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 449)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 449)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..449
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.452"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
BASE COUNT          111 a          136 c           99 g          103 t
ORIGIN      
        1 gctcatattc agccgcaagc aggtaaatcc ctccaacgtc gtcagaaacg cttctgtgag
       61 cgtcccaggg cgcatctgcg ggggaataat ccgtgaggtt ctggagttta ggattttgca
      121 tgcacaccgc cccatactgg gcgatggctc atttgacgtg ttatcattgc cgtatcacct
      181 gtgttgtctg tcgcaaaata gaattcctac aggtggtcac gcccccgaac gattgccctc
      241 gttgcggggg tcgcttttaa cgcgaccact ccaaacagag tacttccaaa cccatttcca
      301 agcaaatcac ctctcaggcc ttgccgcaca agggctgagg ccgaattcca atcccagagt
      361 tatcccttaa gtataaatac aaggaacgcg cgcgaatttt ccacctaatt tccccgtaca
      421 tccgccccgc cagaaaaccc aaaaacgct
//
LOCUS       DAOKIP010000443          428 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.453,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000443 DAOKIP010000000
VERSION     DAOKIP010000443.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 428)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 428)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..428
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.453"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(62..274)
                     /locus_tag="QEL58_004080"
     CDS             complement(62..274)
                     /locus_tag="QEL58_004080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005408372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4287 domain-containing protein"
                     /protein_id="HDS1678492.1"
                     /translation="MSTDTTPKGPASYFPSIEKTYGQPVAHWFGLLAGKKGLKHMELV
                     SFLKSEHGLGHGHANALVAHHLAGKG"
BASE COUNT           81 a          146 c          122 g           79 t
ORIGIN      
        1 acagttgcag atgaaatcgt tcagctgaag gccctccacc ctgcccccga cccgcggctg
       61 atcagccctt gccggccaga tggtgcgcca ccagcgcgtt ggcatggcca tggcccagcc
      121 cgtgctcgct cttcaggaag ctgaccagtt ccatgtgctt caggcccttc ttgcccgcca
      181 gcagcccgaa ccagtgcgcc accggctggc cgtaggtctt ctcgatggag gggaaatacg
      241 aggccgggcc tttcggcgtg gtgtcagtgc tcatgtgctg ctcccgttga aagtcattca
      301 ttcgacgaac cacagacgtg gaaatcgaca tccccacaca tccgaccccg tgtcgaccaa
      361 cggtcggcac ctaccatcag cagcaggttc caacagctcg cgggaaactg tcgaaggcgg
      421 ggtggctc
//
LOCUS       DAOKIP010000444          406 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.454,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000444 DAOKIP010000000
VERSION     DAOKIP010000444.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 406)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 406)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..406
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.454"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            <1..>406
                     /locus_tag="QEL58_004081"
     CDS             <1..>406
                     /locus_tag="QEL58_004081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="IS30-like element ISAba125 family transposase"
                     /protein_id="HDS1678493.1"
                     /translation="TRLCILATLPDAKAESVRKALTEALKYLPAELRKTLTYDRGREM
                     SEHKILEEDLGIDVYFCDPHSPWQKGTCENMNGLIRQYLPKGIDLNQADQHYLNQVAM
                     SLNTRPRKALDWLTPLEKFAQLVDYHMAFETVA"
BASE COUNT          131 a           76 c           84 g          115 t
ORIGIN      
        1 atacacggct ctgtatcttg gcaacattac ctgatgcaaa ggcagaatca gtgcgcaagg
       61 ctttaactga agctctgaaa tatttacctg cagaactgcg taaaacgttg acctatgacc
      121 gtggacgcga gatgtcagaa cataaaatac tcgaagaaga tttaggcata gatgtatatt
      181 tctgtgaccc acattcacct tggcaaaaag gcacatgcga aaatatgaat ggtttaatta
      241 ggcaatattt acctaaaggg attgatttaa atcaggcaga tcagcattat ttaaatcaag
      301 ttgccatgtc actgaatact cgtcctagaa aggcgttaga ttggcttaca ccattagaga
      361 aatttgctca gcttgttgat tatcatatgg cttttgaaac tgtcgc
//
LOCUS       DAOKIP010000445          394 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.455,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000445 DAOKIP010000000
VERSION     DAOKIP010000445.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 394)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 394)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..394
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.455"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            149..>394
                     /locus_tag="QEL58_004082"
     CDS             149..>394
                     /locus_tag="QEL58_004082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005419887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1678494.1"
                     /translation="MHSDHAERLPEAASDLADAGAGDGVTLPPQEALLDDAGTGQDTV
                     ELAPPRHRLPQIALPDNVVLKGAVQKLVEQKSRLDALA"
BASE COUNT           70 a          150 c          122 g           52 t
ORIGIN      
        1 tgatcctggc tcgcatccac gccccgcgcg gatctactgc gcgcgccgtc acactctccg
       61 aattggcgtc tcaacttcac cgcacgtacg ccgttaccgg caaggacttc agtcgacgct
      121 ccgtcgacgc aacctaccgg aacgccccat gcacagcgac cacgccgaac gattgcccga
      181 agctgccagc gacctggccg acgctggggc aggcgacggc gtgaccctgc cgccgcagga
      241 agcgctgctg gatgacgcgg gcaccggcca ggacaccgtc gaactggccc ccccgcgcca
      301 ccgcctgccg cagatcgcgc tgcccgacaa cgtggtgctg aagggtgcgg tgcagaagct
      361 ggtcgagcag aaatcgcggc tcgacgcgct ggcc
//
LOCUS       DAOKIP010000446          386 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.456,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000446 DAOKIP010000000
VERSION     DAOKIP010000446.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 386)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 386)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..386
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.456"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..364)
                     /locus_tag="QEL58_004083"
     CDS             complement(<1..364)
                     /locus_tag="QEL58_004083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008265875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1678495.1"
                     /translation="MFNALLDPLGQRTAQRRTRRHEDPQAVAQDYLQYMLSDYEERRG
                     PGHRNWRDLCPVYAFALTTHAADWPRGDAADTCEELAEHWEQMRGQSRLSWSQARPVV
                     EDAWRALDHIPAAAVRPLL"
BASE COUNT           54 a          134 c          140 g           58 t
ORIGIN      
        1 gcagcagtgg ccgcactgcc gcggccggaa tatggtccag cgcgcgccag gcgtcttcca
       61 ccaccggccg cgcctgcgac cagctcagcc gcgactgccc gcgcatctgc tcccagtgct
      121 cggccagttc ctcgcaggta tcggcggcgt caccgcgcgg ccagtcggcg gcgtgggtgg
      181 tcagcgcgaa ggcatagacc gggcacaggt cacgccagtt gcgatggccg ggcccgcgac
      241 gctcctcgta atcgctgagc atgtactgca ggtagtcctg cgccaccgcc tgcgggtctt
      301 catggcgacg cgtgcggcgc tgcgcggtgc gctggccgag cggatcgagc agggcgttga
      361 acacggacgg tgcgggtcgt tcaaga
//
LOCUS       DAOKIP010000447          374 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.457,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000447 DAOKIP010000000
VERSION     DAOKIP010000447.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 374)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 374)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..374
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.457"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..>374)
                     /locus_tag="QEL58_004084"
     rRNA            complement(<1..>374)
                     /locus_tag="QEL58_004084"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
BASE COUNT           86 a          116 c           72 g          100 t
ORIGIN      
        1 cagtattagg ccagatggct gccttcgcca tcggtattcc tccagatctc tacgcatttc
       61 accgctacac ctggaattct accatcctct cccatactct agccaaccag tatcgaatgc
      121 aattcccaag ttaagctcgg ggatttcaca tttgacttaa ttggccgcct acgcacgctt
      181 tacgcccagt aaatccgatt aacgctcgca ccctctgtat taccgcggct gctggcacag
      241 agttagccgg tgcttattct gcgagtaacg tccactatcc taaagtatta atctaggtag
      301 cctcctcctc gcttaaagtg ctttacaacc aaaaggcctt cttcacacac gcggcatggc
      361 tggatcaggg ttcc
//
LOCUS       DAOKIP010000448          372 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.458,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000448 DAOKIP010000000
VERSION     DAOKIP010000448.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 372)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 372)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.458"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(1..>372)
                     /locus_tag="QEL58_004085"
     CDS             complement(1..>372)
                     /locus_tag="QEL58_004085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005411250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic ring-cleaving dioxygenase"
                     /protein_id="HDS1678496.1"
                     /translation="YFDEDSFAKAALLRRWAAERFPVELGNWNLEPRGPHVTPSFYFG
                     FTNDLLPVLVPWLQLNSLGLTILIHPNTGDGRADHLHYALWVNRAQPVNAYNWPTPKP
                     GEREPLEEVFPNVVPTVPLET"
BASE COUNT           60 a          118 c          130 g           64 t
ORIGIN      
        1 tcaggtctcc agcggcaccg tcggcaccac gttcgggaag acttcctcca gcggctcccg
       61 ttcgccgggc ttcggtgtcg gccagttgta ggcattcacc ggctgcgcgc ggttcaccca
      121 cagcgcgtaa tgcagatggt cggcgcggcc gtcgccggta ttggggtgga tcaggatggt
      181 caggcccagg ctgttgagct gcagccaggg caccagcact ggcagcaggt cgttggtgaa
      241 gccgaaatag aacgaaggcg tgacgtgcgg cccgcgcggt tccaggttcc agttgcccag
      301 ctccaccggg aagcgttcgg cggcccagcg ccgcagcagg gccgccttgg cgaagctgtc
      361 ctcatcgaag ta
//
LOCUS       DAOKIP010000449          357 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.459,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000449 DAOKIP010000000
VERSION     DAOKIP010000449.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 357)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 357)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..357
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.459"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(2..298)
                     /locus_tag="QEL58_004086"
     CDS             complement(2..298)
                     /locus_tag="QEL58_004086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005407713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1678497.1"
                     /translation="MAWLSLLLFLPSFLLLGSLYWLFPRQPRTPRRRLFDGITLLLAF
                     ALSILSMLWGYRIGMAQPGAGPIWPQVLAVLYAYGAFLAVLVMALLLRPRWLVR"
BASE COUNT           78 a          122 c          122 g           35 t
ORIGIN      
        1 gttatcggac cagccagcgc ggccgcagca gcaacgccat taccagcacc gccaggaacg
       61 cgccgtaggc gtacagcacc gccagcacct gcggccagat cgggccggcg ccgggctgtg
      121 ccatgccaat gcgatagccc cacagcatcg acaggatgct cagggcgaag gccagcagca
      181 gggtgatgcc atcgaacagg cgccgccgcg gggtgcgcgg ctggcgcggg aacagccagt
      241 acaggctgcc cagcagcagg aacgagggca ggaacagcag cagcgacaac caggccattg
      301 cagactccat gtcatcgcgc cggaggcgcg tggacatcat gccacgcgcg atgtgcc
//
LOCUS       DAOKIP010000450          317 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.460,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000450 DAOKIP010000000
VERSION     DAOKIP010000450.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 317)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 317)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..317
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.460"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            <1..>317
                     /locus_tag="QEL58_004087"
     rRNA            <1..>317
                     /locus_tag="QEL58_004087"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT           78 a           63 c          109 g           67 t
ORIGIN      
        1 ccgtaagccg ttgaaggtgg attgagaagt ctgctggagg tatcggaagt gcgaatgctg
       61 acatgagtaa cgataatgcg ggtgaaaaac ccgcacgccg aaagcccaag gtttccttgc
      121 gcaacgttaa tcggcgcagg gtgagtcggc ccctaaggcg aggacgaaag tcgtagtcga
      181 tgggaagcag gttaatattc ctgcacctcg cgtaagtgcg atggagggac ggagaaggtt
      241 aggtgtacca ggcgttggtt gtcctgggga aaggcggtag gtttggatct ttggcaaatc
      301 cgggatcctt taagacc
//
LOCUS       DAOKIP010000451          306 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.461,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000451 DAOKIP010000000
VERSION     DAOKIP010000451.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 306)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 306)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..306
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.461"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
BASE COUNT           86 a           87 c           83 g           50 t
ORIGIN      
        1 acgtcatgcg tgatgtcacg gcgcttctgt catcaccctg caaaaaaagc cttgacgaaa
       61 tctgcaggat ctctagaatt cgctcccttg ctgcagcgca tcgcttcttc ggaaacggca
      121 cgcgaacagc gacgccacca ccgacgaacg agatgatcga acgaaggtgt tgacggactc
      181 gaaaagtccg gcataatagg cggctcgcaa cgacgaaagg ccctcgggtc caacgacgaa
      241 gcagcatcgg caacaacgtc cactccggtg agacggcctt gaaaaaaggt gttgacgaag
      301 cggaaa
//
LOCUS       DAOKIP010000452          258 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.462,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000452 DAOKIP010000000
VERSION     DAOKIP010000452.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 258)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 258)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..258
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.462"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            13..249
                     /locus_tag="QEL58_004088"
     CDS             13..249
                     /locus_tag="QEL58_004088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019338423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1678498.1"
                     /translation="MNLLAWIGMFAAWSLFATWVLRWGGAAWMEGWKSLAFVDSWGSL
                     WDEAQIKLYFLCLWIVYGLWFLAGLFVPEWRGLP"
BASE COUNT           32 a           73 c           97 g           56 t
ORIGIN      
        1 gggagggaaa cgatgaacct gctggcctgg atcgggatgt tcgccgcctg gagcctgttc
       61 gccacctggg tgctgcgctg gggtggcgcg gcctggatgg aaggctggaa gtcactggcc
      121 ttcgtcgaca gctggggcag cctgtgggac gaggcgcaga tcaagctgta cttcctctgc
      181 ctgtggatcg tctacggcct gtggttcctg gccggcctgt tcgtgccgga gtggcgcggc
      241 cttccgtaat gcctctgc
//
LOCUS       DAOKIP010000453          256 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.463,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000453 DAOKIP010000000
VERSION     DAOKIP010000453.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 256)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 256)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..256
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.463"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
BASE COUNT           45 a           76 c           90 g           45 t
ORIGIN      
        1 cttcgctctg agccgagcat ggctcggctc tacagaagat cattccgaac actctttcgc
       61 tcatccatac atggcgtgga cctatcgaca gatcgcggaa atctgtcgaa ggcggggtgg
      121 gtccggttgc gggggcgtga gccgcatgga tgcggcgacc gagcttacat gggtgagggc
      181 gctttgcttg cgaagcaccg cttcgcaagc gcccgaacgc acagccgcca gcggctgggc
      241 cgggccccgg aggggg
//
LOCUS       DAOKIP010000454          254 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.464,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000454 DAOKIP010000000
VERSION     DAOKIP010000454.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 254)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 254)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..254
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.464"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
BASE COUNT           43 a           71 c           84 g           56 t
ORIGIN      
        1 agccgccccc gtcccacctt cgacagattc cctgtgacgg tgggcaagag catgggttac
       61 tgacggactg aaggaaaaca aaaggacgcg gccttcgccg cgtccttttg tttgtatgca
      121 gtgctccgta gagtcgagct tgctcgactg cgagcaagcg cagcgcgcga cccgctgttg
      181 cttttctttc tttcttccgt ggcgggcggc cacaggaaac tgtcagaggg cgagcgggtt
      241 gggttcgcgg gggt
//
LOCUS       DAOKIP010000455          233 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.466,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000455 DAOKIP010000000
VERSION     DAOKIP010000455.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 233)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 233)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..233
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.466"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
BASE COUNT           46 a           62 c           62 g           63 t
ORIGIN      
        1 tttccgcttc gtcaacacct tttttcaagg ccgtctcacc ggagtggacg ttgttgccga
       61 tgctgcttcg tcgttggacc cgaaggtctt tcgtcgttgc gagccgccta ttatggcagg
      121 cctttcagct ttgtcaacaa cttgttgaag gaacttgaag ctcttcgtga agttgttgcg
      181 gcaagtccag gtcgaaaccg ggtgcctgca aaaaaaggaa aaccccgctg cgc
//
LOCUS       DAOKIP010000456          231 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.467,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000456 DAOKIP010000000
VERSION     DAOKIP010000456.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 231)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 231)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..231
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.467"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..>231)
                     /locus_tag="QEL58_004089"
     rRNA            complement(<1..>231)
                     /locus_tag="QEL58_004089"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT           47 a           67 c           48 g           69 t
ORIGIN      
        1 tttagccttg gaggatggtc cccccatatt cagacaaggt ttcacgtgcc tcgccctact
       61 cgtcatcatt atgtgtgccc tttcgtgtac gggactatca ccctctacgg ttgcacttcc
      121 cagagcattc cgctaaaaca cacataactt aatgggctga tccccgttcg ctcgccgcta
      181 ctgagggaat ctcaattgat ttcttttcct gagggtactg agatgtttca c
//
LOCUS       DAOKIP010000457          226 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.denovo.468,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000457 DAOKIP010000000
VERSION     DAOKIP010000457.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 226)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 226)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..226
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.denovo.468"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            <1..>226
                     /locus_tag="QEL58_004090"
     rRNA            <1..>226
                     /locus_tag="QEL58_004090"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT           56 a           54 c           61 g           55 t
ORIGIN      
        1 ggcgctgtct ccagcagagg ctcagtgaaa tcgaaatcgc tgtgaagatg cagtgtaccc
       61 gcggctagac ggaaagaccc cgtgaacctt tactgcagct tgacactgaa ctttgacctt
      121 acttgtgtag gataggtggg aggctttgaa gtagggacgc cagttcctat ggagccatcc
      181 ttgaaatacc accctggtaa tgttgaggtt ctaactctga cccata
//
LOCUS       DAOKIP010000458         7259 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.guided.194,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000458 DAOKIP010000000
VERSION     DAOKIP010000458.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 7259)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7259)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7259
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.guided.194"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            <1..205
                     /locus_tag="QEL58_004091"
     CDS             <1..205
                     /locus_tag="QEL58_004091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004147008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF2946 domain-containing protein"
                     /protein_id="HDS1678499.1"
                     /translation="PHADHEMGVDCDYCLIAARMITLLVAALLLLAPMTPVCRALRGA
                     VQALPQRISGTLGARGPPVLRAA"
     gene            334..2472
                     /locus_tag="QEL58_004092"
     CDS             334..2472
                     /locus_tag="QEL58_004092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004147010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDS1678500.1"
                     /translation="MKTNPNSACLRRALLPALCAWLLQAAPALAADTAPPTTLDTVRV
                     VDARSGELSSSASAGSALGLSVLQTPAALTVISRDQLEQRGDTNLNDAISRAGAISAM
                     PHPGNGLSALSSRGFTDGASVMRLYDGLRQYGGVGITFPFDTWSIERIEVLRGPASVI
                     HGDGAIGGVINIVPKKPSRGAIENEVSVTVGSEDTARLGFGSGGALTPALAYRLDMSG
                     NYSAGWVDRGRNSDATFSGALLWQPRNDLQLTLTHAQGQQRPMRYFGTPLIDGRQLDA
                     LRHRNFNVEDSQIRFRDRWTQLDALWTPTANVEWRTRVYQIDSQRDWRNAEAYVYNPR
                     TGLVDRSGNTRITHNQDQTGLTSTLSVQGEVGGLANSFAVGLDANRAHFKHTNNTYAG
                     SSGPVDPFHPVPGTFVSDAPNLPRYRNRAEQYALFVEDRLALGERWSVLGGLRHDRAD
                     IDRTDLISGQRAFSKTYSSTGWRAGTVFALRPTLSLYAQYSQAADPVSGLLMISPANG
                     AFDLAKGRQFEVGMKQAFDGGEWTLAAYRIRKTGLLSRDPLQPDRRVQIGAQTSRGIE
                     ASLNWNFAPQWSLDANATVLKAEFEDFLETAGTPPVLVSRDGNVPPNVAERLANVWLS
                     WQFLPDWTLAGGARYVGKRYADNANTLELPGYSTTDLALTWQAAPRTRLTARMFNVFD
                     KAYYATAYYTSTQWLLGADRRVEFTVDHRF"
     gene            2484..3989
                     /locus_tag="QEL58_004093"
     CDS             2484..3989
                     /locus_tag="QEL58_004093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019659485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY domain-containing protein"
                     /protein_id="HDS1678501.1"
                     /translation="MSLRSTAKRWTYLVHRWLGIGGCLLMLLWFVSGMVMLFIGYPKL
                     TPGERLAALPLLGDAVDWRGLSALPGAVQAEPEAVALTTLRGEPTYVVRSGSNVGAWS
                     ARTGQALLPVSAQQAEASAAQFAGGQAFVGAMRVDEDRWTHSRALDTHRPLYRVEVGG
                     TQPGDLYVSSHTGEVVLDAPHAQQRWNYVGAWLHWLYFLRMQSVDPVWTWGVIVLSAL
                     CTVAAISGIVVGLWRWRFRGHYRSGAKTPYVEPWMRWHHLIGLVAAAFVFTWIFSGLM
                     SMNPLGVFSGTRNAINADRYRGDRVAVDGALTEPSALLAVAGDARFRPVEIQWRRIGG
                     ELFALLLDGQGDTRIVSNVDGRLQVARQLPAARLQQQAGLMSDAPLQDFRVLQSPDAY
                     FYPRAPEAMNGAAVRRFPVAVADFDDAEATRVYLDLGSGDPLLTMGHRERVGRWLFYF
                     LHSWDLPAMLRQDVTRLGVLLLLSTAGTALCATATVIGYRRVRMKVRRRRR"
     gene            complement(3999..5132)
                     /locus_tag="QEL58_004094"
     CDS             complement(3999..5132)
                     /locus_tag="QEL58_004094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004147013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDS1678502.1"
                     /translation="MPIANRARAEQHATRAAFFIPGFATALWATLVPFAKSRTDINDA
                     TLGLVLLCLGAGSLLAMPLSGVLAARLGCRRVMVASTLLICLSVPGLVLADTAWLLGL
                     VLFVFGAAVGAMDCTMNVQAVIVEREARRVMMSGFHAFFSIGGFLGAAAMTVLLSAQL
                     PPLASVLIGVGAMLLVMLLSASYWHRERMPHDTPMLAMPHGVVLFIGVLAFIAFLGEG
                     AMLDWSAVFLSDVRRVDASLAGIGYVTFTLTMTVARLFGDALVARVGRQRAIVFGALL
                     AASGVLVLTLVTPWQASLLGYVLVGLGCANIAPALFSLAGHQTRMPGALAITAVSTLG
                     FAGILAGPALIGFAANHFGLVAAFIGVATALLLVAMSTRWLRV"
     gene            complement(5144..5920)
                     /locus_tag="QEL58_004095"
     CDS             complement(5144..5920)
                     /locus_tag="QEL58_004095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005408351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HDS1678503.1"
                     /translation="MSSDPSPLPAQRPQQILEELRQQGRVVAADLARRYAVSEDSIRR
                     DLRELATQGLCQRVYGGAVLPPPKERPLRERLTHDRGDKAELAARVCALLQPGQVILL
                     DAGSTNLAIAQQLPAALGLTVITNAPQIATAASYHEGTTVQLIGGRLASGGGAVGAEA
                     LAQVQRLRADVYLPGPCAVDGDTGVWAMDSEEATLKRAMVACSSRVIVAATTEKLGAR
                     GNWQIASLDEIDDLVLTTSAPPALAARFRAAGITVHPTLP"
     gene            6047..6694
                     /gene="smqnr"
                     /locus_tag="QEL58_004096"
     CDS             6047..6694
                     /gene="smqnr"
                     /locus_tag="QEL58_004096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005408352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SmQnr family pentapeptide repeat protein"
                     /protein_id="HDS1678504.1"
                     /translation="MSPTIHHKLRIGADQYTGQKVVDQQFQQCDFSGADLTATEFINC
                     SFYDADSRSGCRFNGATLKEASFRGCDISMCHFNFIKALGLEISECRAQGADFSNASF
                     MNQITTRSGFCSGFIKKSNLRYANFSRVTLEKCELWENRWDGANVSGASFAGSDLSGG
                     QFEGIDWNSANFTDCDLTNSELGELDLRSTNLRGATLDVQQVALLMQRIGITVVP"
     gene            complement(6710..>7259)
                     /locus_tag="QEL58_004097"
     CDS             complement(6710..>7259)
                     /locus_tag="QEL58_004097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HDS1678505.1"
                     /translation="GRVLVLGAGGGLELKAFAEAQPGWQLLGVDPAAPMLALAEQTLG
                     PLNARVELLEGYIDDAPDVRFDGASCLLTLHFLDATQRLHTLRELRKRLRAGAPLVVA
                     HHSVPQDPSGKLRWLQRYAAFAEASGVARADAQRAIEAIAERLPLLSPEQEVALLQEA
                     GFDDVELFYAGFSFKGWVAYAT"
BASE COUNT         1198 a         2401 c         2507 g         1153 t
ORIGIN      
        1 cccccatgcc gatcatgaga tgggcgtgga ctgcgattac tgcctgattg ccgcacggat
       61 gatcaccctg ctggtggcag cgttgctgct gctggcaccg atgacgccgg tctgccgtgc
      121 gttgcgcggg gcggtgcagg ccctgccgca acggatcagc ggcaccctgg gagcgcgtgg
      181 gccaccggtc ctcagggccg cctgagccgc acgcgcgctg cagtgatctt cctgccatga
      241 ggctgccggc cacggccggt gcccgcacgc gcgtgcctat ccctttctga ttgctgccct
      301 gcaatgcggg gtggccttgc atgccgtgac ccaatgaaaa ccaaccccaa ctccgcgtgc
      361 ctgcgccggg cgctgctgcc tgcgctgtgt gcctggcttc tgcaggcggc gcctgccctt
      421 gccgccgata cggcgcctcc caccacgctg gataccgtgc gcgtggtgga tgcccgcagc
      481 ggcgagctgt cctcctccgc cagcgccggt tccgcgctgg gcctgagcgt gctgcagacg
      541 ccggccgcgc tcaccgtcat cagccgcgac cagctggagc agcgcggcga taccaacctc
      601 aatgatgcga tcagccgcgc aggtgcgatc agcgccatgc cgcaccccgg caacggcctg
      661 agcgcgctgt ccagccgtgg ttttaccgat ggggcgtcgg tgatgcggtt gtatgacggg
      721 ttgcgccagt acgggggcgt gggcatcacc ttcccgttcg atacctggtc gatcgagcgc
      781 atcgaagtgc tgcgtgggcc ggcctcagtg atccatggcg acggcgcgat cggcggggtc
      841 atcaacatcg tgccgaagaa gccctcgcgc ggcgccatcg agaacgaagt cagcgtgacc
      901 gtcggcagcg aggacaccgc acgccttgga ttcggcagcg gcggcgcgct gactccggcg
      961 ctggcgtacc ggctggacat gagtggcaat tacagcgcgg ggtgggtcga ccgcgggcgc
     1021 aacagcgacg ccaccttctc cggtgcgctg ctgtggcagc cgcgcaatga cctgcagctg
     1081 accctcaccc atgcgcaggg ccagcagagg ccgatgcgct acttcggcac gccgttgatc
     1141 gacggtcgcc agctggacgc gctgcgccac cgcaacttca acgtggaaga cagccagatc
     1201 cgcttccgtg accgctggac ccagctcgac gcgctgtgga cgcccaccgc gaacgtggag
     1261 tggcgcaccc gcgtctacca gatcgacagc cagcgcgact ggcgcaacgc cgaggcctat
     1321 gtctacaacc cacgcaccgg cctggtcgat cggtccggca acacccggat cacccacaac
     1381 caggaccaga ccgggttgac ctcgacgctg agcgtgcagg gtgaggtggg cggcctggcg
     1441 aacagtttcg cggtgggact ggatgccaac cgtgcgcact tcaagcacac caacaacacc
     1501 tatgccggca gttcgggtcc ggtcgatccg ttccatccgg tgcccggcac gttcgtcagc
     1561 gatgcgccga acctgccgcg ctaccgcaac cgcgccgagc agtatgcgct gttcgtggaa
     1621 gaccggctgg cactgggtga gcgctggtcg gtgctgggtg ggctgcgcca cgatcgtgcc
     1681 gacatcgatc gcaccgatct gataagcggc cagcgtgcgt tctcgaagac ctacagcagc
     1741 accgggtggc gcgcgggcac ggtgtttgcg ctgcgcccga cgctgagcct gtacgcgcag
     1801 tattcgcagg cagcggaccc ggtcagcggc ctgctgatga tcagcccggc caacggggcg
     1861 ttcgacctgg ccaagggccg gcagttcgag gtgggcatga agcaggcctt cgacggtggc
     1921 gagtggacgc tggccgccta ccgcatccgc aagaccggtc tgctcagccg cgacccgctg
     1981 cagcctgacc gccgcgtgca gatcggcgcg cagacttcgc gtggcatcga ggcttcgttg
     2041 aactggaact tcgcgccgca gtggtcgctc gatgccaacg cgacggtgct gaaggccgag
     2101 ttcgaggact tcctggaaac cgcggggacg ccgccggtgc tggtctctcg cgacggcaat
     2161 gtgccgccga atgtggccga acgcctggcc aatgtgtggt tgagctggca gttcctgccc
     2221 gactggaccc tggccggtgg cgcgcgctac gtcggcaagc gctacgccga caacgccaac
     2281 acgctggaac tgccgggcta cagcaccacc gacctggcac tgacctggca ggccgcgccg
     2341 cggacgcggc tgactgcacg catgttcaat gtgttcgaca aggcgtacta cgccaccgcg
     2401 tactacacca gtacacagtg gttgttgggt gcggaccggc gcgtcgaatt cactgtcgat
     2461 catcgcttct gagggcaagg gccatgtcgc tgcgttccac cgccaagcgc tggacctacc
     2521 tggtgcatcg ctggctgggc atcggaggat gcctgttgat gttgctgtgg ttcgtcagcg
     2581 gcatggtgat gctgttcatc ggctatccaa agctgacacc cggtgagcgc ctggcggcgc
     2641 tgccgctact gggtgatgcc gtcgattggc gagggctgtc ggcgctgcca ggcgctgtac
     2701 aggccgagcc ggaagcggtg gcgctgacca cgctgcgtgg cgaacccacc tatgtggtgc
     2761 gcagcggcag caacgtcggc gcgtggtcgg cgcggacagg ccaggcgctg ctgccagtgt
     2821 cggcacagca agctgaagcg tcggccgcgc agttcgccgg cgggcaggcg ttcgtcggcg
     2881 caatgcgtgt ggatgaggat cgctggacgc actcgcgcgc gctggatacg catcggccgc
     2941 tgtaccgggt ggaggtgggc ggtacccaac ctggggacct ctacgtgtcc tcgcacacgg
     3001 gcgaggtggt gctggatgca ccgcatgcgc agcagcgctg gaactatgtg ggcgcgtggc
     3061 tgcactggct gtatttcctg cgcatgcaat cggtggatcc tgtatggacg tggggggtga
     3121 tcgtgctgtc cgcgctgtgc accgtggcgg cgatcagcgg catcgtggtt ggcctgtggc
     3181 gctggcgttt ccgcggacac taccgctccg gcgcgaagac gccgtatgtc gaaccctgga
     3241 tgcgctggca ccacctgatc gggttggtcg ctgctgcctt cgtgttcacc tggatcttca
     3301 gcggcttgat gtcgatgaat ccgctgggcg tgttcagcgg cacccgcaat gcgatcaatg
     3361 ccgaccgtta ccgcggagac agggtggcgg tggatggggc gctgaccgaa ccgtcggcgt
     3421 tgctggcggt ggccggcgac gcgcggttcc ggccggtgga aatccagtgg cgtcgcatcg
     3481 gtggcgagct gttcgcgctg ttgctggacg ggcagggcga tacccgcatc gtgtccaatg
     3541 tggacgggcg gctacaggtc gcgcgccagt tgcctgctgc gcgcctgcag cagcaggcag
     3601 gcctgatgtc ggatgccccg ctgcaggact tccgcgtcct gcagtcgcct gatgcctatt
     3661 tctatccgcg cgcgcccgag gccatgaacg gtgcggccgt gcgccgcttt ccggtggcgg
     3721 ttgccgactt cgatgatgcc gaggcgacgc gtgtctacct cgacctgggc agcggtgacc
     3781 cgctgttgac gatggggcac cgcgagcggg tggggcgctg gctgttctac ttcctgcaca
     3841 gctgggacct gccggcgatg ctgcggcagg acgtcacccg gctgggggtg ttgctgctgc
     3901 tgagcacggc aggcaccgcg ctgtgcgcga ccgctaccgt gatcggctat cggcgcgtgc
     3961 ggatgaaggt gcggcgtcgg cggcgctgat gcgtcgggtc acacccgcag ccagcgggtg
     4021 gacatcgcca ccagcaacag ggccgtcgcc acgccgatga acgcggcgac caggccgaag
     4081 tgattggcgg cgaagccgat cagcgccggg ccggcgagga tgccggcaaa gccaagcgtg
     4141 gacaccgctg taatcgccag tgcacccggc atgcgggtct ggtggccggc cagcgagaac
     4201 agggccggtg cgatgttggc gcaacccagg cccacaagca catagccgag cagggatgcc
     4261 tgccagggcg tgaccagggt cagcaccagc acgccgctgg cggcgagcag ggcgccgaac
     4321 acgatcgcgc gctggcgacc gacgcgtgcc accagcgcat cgccgaacag gcgcgcgacg
     4381 gtcatggtca gggtgaaggt cacatagccg atgccggcaa ggctggcgtc gacacgacgt
     4441 acgtcgctga ggaacaccgc gctccagtcc agcatcgcgc cttcgccaag gaaggcgatg
     4501 aacgccagaa cgccgatgaa cagcaccacg ccgtgcggca tcgccagcat cggcgtgtca
     4561 tgcggcatgc gctcgcggtg ccagtacgac gccgacaaca gcatcaccag tagcatggcg
     4621 cctacgccaa tcagcaccga cgccaacggt ggcagctgtg ccgaaagcag tacggtcatg
     4681 gcggccgcac caaggaaccc gccgatgctg aagaaggcat ggaagccgga catcatcacg
     4741 cgccgggctt cgcgctcgac gatcaccgcc tgcacgttca tcgtgcagtc catcgccccc
     4801 accgcggcac cgaacacgaa caacaccagt cccagcagcc aggccgtgtc ggccaacacc
     4861 agccctggca cgctgaggca gatcagcaac gtgctggcca ccatcacccg acggcagcct
     4921 aggcgcgcgg cgagcacgcc ggacagcggc atcgccagca gcgaaccggc acccaggcag
     4981 agcagcacca ggcccagcgt ggcatcgttg atgtccgtgc gtgacttggc gaacggcacc
     5041 agcgtggccc ataacgcggt agcgaagccg ggaatgaaga atgcagcgcg ggtcgcgtgc
     5101 tgttcggcac gcgcgcggtt ggcaataggc atgagcggtt cggtcagggc agggtgggat
     5161 gcactgtgat gccggcggca cggaagcgcg cggccagtgc gggaggcgcc gacgtggtca
     5221 gcaccagatc gtcgatctcg tcgaggctgg cgatctgcca gttgccgcgc gcgccgagct
     5281 tttcagtggt ggcagcgacg atgacgcggc tgctgcacgc caccattgcg cgcttcagcg
     5341 tggcttcttc cgaatccatc gcccacacgc cggtgtcgcc gtccaccgcg cacggacccg
     5401 gcaggtacac atcggcccgc aggcgctgca cctgggccag cgcttcggca ccgaccgcgc
     5461 cgccaccgct ggccaggcgg ccgccgatca gctgcacggt ggtgccttcg tgatagctgg
     5521 cggccgtagc aatctgcgga gcattggtga tcaccgtcag cccgagcgcg gcgggcagct
     5581 gctgggcgat ggccaggttg gtcgacccgg catcaagcag tatcacttgg cccggttgca
     5641 gcagggcgca aacgcgagcg gccagttcgg ccttgtcgcc ccggtcatgg gtcaatcgct
     5701 cacgcagcgg gcgttccttc ggcggcggca gcaccgcccc cccgtagaca cgctggcaca
     5761 ggccctgggt ggccagttcg cgcaggtcgc ggcggatcga atcttcagag acggcatagc
     5821 ggcgcgccag gtcggcggcc accacacggc cctgctggcg cagttcctca aggatctgct
     5881 gggggcgctg ggcgggaagg gggctgggat cggagctcat gccgggaatc atgcattact
     5941 gtgcatgaac gtgcaatatc aggaaccgcg ttccgcggcg ctggcggggt tgggaatacg
     6001 gcgcttgccc ggcatcatgg ccgcgctccc tggcatggaa ttcctgatgt cccccaccat
     6061 tcaccacaag ctgcgcatcg gcgccgacca gtacaccggc cagaaagtgg tcgaccagca
     6121 gttccagcaa tgcgattttt ccggcgcgga cctgaccgcg accgagttca tcaactgcag
     6181 cttctacgac gccgacagcc gcagcggttg ccgcttcaac ggcgccacgc tgaaggaagc
     6241 cagcttccgt ggctgcgaca tcagcatgtg ccacttcaac ttcatcaagg cactgggcct
     6301 ggagatcagt gaatgccggg cgcagggcgc ggacttcagc aacgccagtt tcatgaacca
     6361 gatcaccacg cgcagcgggt tctgcagcgg cttcatcaag aagtcgaacc tgcgctacgc
     6421 gaacttctcg cgggtgacgc tggagaagtg cgaactgtgg gagaaccgct gggacggcgc
     6481 caatgtgagc ggcgccagtt tcgccggctc ggacctgtcc ggtggccagt tcgagggcat
     6541 cgactggaac agcgccaatt tcaccgattg cgacctgacc aactccgagc tcggcgagct
     6601 ggacctgcgc agtaccaacc tgcgcggcgc gacattggac gtgcagcagg tggcgctgtt
     6661 gatgcagcgc atcggcatca ccgtggtgcc gtgatctggc ccggatgcat cacgtcgcgt
     6721 acgccaccca gcccttgaag ctgaagcccg catagaacag ctccacgtcg tcgaagccgg
     6781 cttcctgcag cagcgcgacc tcctgctcgg gtgacagcag cggcagccgc tcggcaatgg
     6841 cctcgatcgc gcgctgcgcg tcggcgcggg caacgccgga ggcttcggcg aacgctgcgt
     6901 agcgctgtaa ccagcgcagc ttgccggacg ggtcctgcgg cacgctgtgg tgggcgacaa
     6961 ccagaggggc acccgcgcgc agtcgcttgc gtagttcgcg cagcgtatgc aggcgttgcg
     7021 tggcgtcgag gaagtgcagg gtcagcaggc agctggcgcc gtcgaagcgc acgtccgggg
     7081 catcgtcgat gtagccttcc agcagctcga cgcgtgcgtt caacgggccc agcgtctgct
     7141 cagccagcgc cagcatcggt gcggccgggt ccacgcccag cagctgccag cccggttgtg
     7201 cctcggcaaa ggctttcagc tccaggccgc caccggcgcc cagcaccagc acgcgcccc
//
LOCUS       DAOKIP010000459         4642 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.guided.262,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000459 DAOKIP010000000
VERSION     DAOKIP010000459.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 4642)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4642)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4642
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.guided.262"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..820)
                     /locus_tag="QEL58_004098"
     CDS             complement(<1..820)
                     /locus_tag="QEL58_004098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017155746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDS1678506.1"
                     /translation="MSHDLNETLIFVKVVEQGSFIAAAKSLGLPKTTVSRKVQELETR
                     LGARLLHRTTRRLGLTEAGSIYHEHCQRIARELEEAESAVSQLQSGPRGWLRFTVPYS
                     IGITWIAPLLGQFHAQYPEIRLDMHMGNEKLDLIAGEADLALRVGALPDSNLVARKLG
                     SLRTQVFASPAYIERYGEPLHPEELQFHRILAMRKPYHTGNSPRFTWQLGENGGELRD
                     FPVTPLMTANDMSALNGALVCGEGLLLTGDVMAKPFVESGMVRRVLAGWTGPEVD"
     gene            968..1195
                     /locus_tag="QEL58_004099"
     CDS             968..1195
                     /locus_tag="QEL58_004099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1678507.1"
                     /translation="MSLRNILARLRNAGQNTLDLAMTVEARPSSLVHKDFREFTAPMR
                     QQRGGVIRLAPHKGDRLRRIGTIPDLGGNVP"
     gene            1192..1962
                     /locus_tag="QEL58_004100"
     CDS             1192..1962
                     /locus_tag="QEL58_004100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HDS1678508.1"
                     /translation="MNGMLTPEVLVLGGTGAVGQGVVGALLEAGSPVLVVGRDPGRLA
                     ALHEQFADEPGLETLLGSLSDDGSARALAERIAQRPRPLAAVIAAMGGPYRRGRVTDR
                     NGDELMGAMQADLMPHVHAVRHLLPLLQDNVHARRYVMIGSPANAKPWAGYGETSITT
                     AALRMYAQVVHQEAQALGVRAQMLEVCSPVCTPANAANACIEWPSSLLVGRRVVSLLD
                     GCRDNRAIVRCDSSDAELPRGLLHLEVPPLWRDTAGVA"
     gene            2054..3277
                     /locus_tag="QEL58_004101"
     CDS             2054..3277
                     /locus_tag="QEL58_004101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014036827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HDS1678509.1"
                     /translation="MTSPNTTPHRFGHRIAMAGVSILAAAVLAACSGGHAEEAGAPPP
                     PQVSAAPVLVKQVSQWDEFSGRVEAVQSVELRPRVSGYIDKVNYVEGQEVKKGEVLFT
                     IDARSYQAEYDRAAAELARARTQATLARSESERAKRLSEQQAISTETAEQRRAAADQS
                     GAAVQAAQAALDAARLNLEFTKVRAPIDGRAGRAMVTAGNLVTAGDSASVLTTLVSLD
                     TVFVYFDADESTFLRYAQMARKGERPSERDSDLPVKVGLSGEEGYPHSGKVDFLDNQV
                     ARSTGTIRVRALLDNADRQFTPGLFARVQLLGSGQFQAMLIDDKAVLTDQDRKYVYVV
                     DKDGKAQRRDIQLGRTAEGLRIVEHGLAAGDKVIIDGVQKVFMPGMPVQAKAVAMQPQ
                     AAPAPGRDATAALNH"
     gene            3405..>4642
                     /locus_tag="QEL58_004102"
     CDS             3405..>4642
                     /locus_tag="QEL58_004102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_021312368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HDS1678510.1"
                     /translation="MDFSRFFIDRPIFAAVLSIVIFAAGLITIPILPISEYPEVVPPS
                     VVVRTVYPGANPKVIAETVATPLEEAINGVEGMMYLKSVAGSDGVLQMTVTFRPGTDP
                     DAAAVKVQNRVAQAQARLPEDVRRQGVTTQKQSPTFLMVVHLTSPQGKYDTLYLRNYA
                     RLHVKDALARIPGVGDAQIFGGGDYAMRAWLDPDKVASRGLTASDVVRAMREQNVQVS
                     AGQLGAEPLPNSQFLTLINAQGRLKTEKEFGDIVLKSGVDGEIVRLADVARLELGAGD
                     YTLRSQLDGKNAVGIGIFQSPGANALEIRDQVISTMDEMQKTMPADVKYEAVYDTTIF
                     VRDSIKAVVSTLLEAIALVVLVVILFLQTWRASIIPLIAVPVSVVGTFAALYLLGFSI
                     NTLSLFGLVLAIGIVVDDAIV"
BASE COUNT          766 a         1524 c         1560 g          792 t
ORIGIN      
        1 agtccacctc cgggccggtc cagccggcca gcacgcggcg aaccatgccg gactcgacga
       61 acggtttggc catcacatcg ccagtcagca gcaggccttc gccgcacacc agtgcgccgt
      121 tcagtgcgga catgtcattg gccgtcatca gcggcgtgac cgggaagtca cgcagttcgc
      181 cgccgttctc gcccagctgc caggtgaagc gcggcgaatt gccggtgtga tacggcttgc
      241 gcatcgccag gatgcggtgg aactgcagct cttcaggatg cagcggctcg ccatagcgtt
      301 cgatgtaagc cgggctggcg aacacctgcg tgcgcaggct gccgagtttg cgcgcgacca
      361 ggttggagtc gggcagggcg ccgacgcgca gtgcaagatc cgcttcgccg gcaatcaggt
      421 ccagcttctc gttgcccatg tgcatgtcca ggcggatctc cggatactgc gcatggaact
      481 ggcccagcag cggcgcgatc caggtgatgc cgatcgaata gggcacggtg aagcgcagcc
      541 agccgcgcgg gccggactgc agctggctca ccgcactctc ggcttcttca agctcgcgcg
      601 cgatgcgctg gcaatgttcg tggtagatcg aaccggcttc tgtcaggccg aggcggcgcg
      661 tggtccggtg cagcaggcgc gcgcccaggc gcgtttccag ttcctgcact ttgcggctga
      721 ccgtggtctt gggaaggccg agcgatttgg cagcggcaat gaagctgcct tgctcgacca
      781 ccttgacgaa gatcagcgtc tcgttgagat cgtgggacat ggtcgggggt cctggacgtc
      841 ggggatggga caatcgtgac agaacgattg gaccgggaac gggatgatta ttccccttaa
      901 tcaggactaa tcaagtaaag gtttgaggtc tatcgtggcg ccattcgtta tttggagccc
      961 gtccgccatg agcctgcgca acattcttgc ccgtctccgg aatgccggcc agaacaccct
     1021 ggacctggcg atgaccgttg aagcccgtcc gagttccttg gtgcacaagg atttccggga
     1081 gtttaccgcg cccatgcgtc agcagcgtgg cggcgtcatc cgcctggccc cgcacaaggg
     1141 tgaccggctg cgtcgaattg ggactatccc ggatttggga ggaaatgtcc cgtgaatggg
     1201 atgctgacgc ccgaagtcct ggtcctcggc ggcaccggcg ccgtgggcca gggcgtggtc
     1261 ggtgcattgc tggaagccgg tagcccggtg ctggtggtcg gtcgcgatcc gggccggctg
     1321 gcggcactgc acgaacagtt cgccgatgag ccgggcctgg aaacgctgct gggttcgctc
     1381 agtgatgacg gctcggcacg ggcgctggcc gagcgcatcg cgcagcgtcc gcgtccgttg
     1441 gcagcggtga tcgccgcaat gggcggtccc taccgccgtg gccgcgtgac cgatcgcaac
     1501 ggtgacgagc tgatgggcgc gatgcaggcc gacctgatgc cgcacgtgca tgcggttcgc
     1561 cacctgctgc cgctgctgca ggacaacgtg cacgcgcgcc gctacgtgat gatcggcagc
     1621 ccggccaatg ccaagccgtg ggcgggttac ggcgagacct cgatcaccac cgccgcgctg
     1681 cgcatgtacg cgcaggtggt gcatcaggaa gcgcaggcgc tgggcgtgcg tgcgcagatg
     1741 ctggaagtct gcagcccggt ctgtaccccg gccaacgcgg ccaatgcctg catcgagtgg
     1801 cccagctcgc tgctggtcgg ccgtcgcgtg gtctcgctgc tcgatggttg ccgcgacaac
     1861 cgcgccatcg tccgttgcga cagcagcgat gccgaactgc cgcgcggcct gctgcacctg
     1921 gaagtacccc cgctctggcg cgataccgca ggcgtcgctt gacctcgacc aaggttgagg
     1981 tcgcattatg cgccgccgat tttcgcaaca ccttttcata tagctgtacc acccctccgt
     2041 acggatgcat gccatgactt cccccaatac caccccacat cgtttcggcc atcgcatcgc
     2101 gatggccggc gtgtcgatcc tcgccgcggc cgtgcttgca gcctgcagcg gcggccatgc
     2161 cgaagaagcc ggtgcgccgc cgccgccgca ggtgagcgcc gcgccggtgc tggtcaagca
     2221 ggtcagccag tgggacgagt tcagcggccg cgtcgaagcg gtgcagagcg ttgaactgcg
     2281 cccgcgcgtg tccggctaca tcgacaaggt caactatgtc gaaggccagg aagtgaagaa
     2341 gggcgaagtg ctcttcacca tcgacgcacg cagttaccag gccgagtacg atcgtgccgc
     2401 cgccgaactg gcccgcgccc gcacccaggc cacgctggcc cgcagcgagt ccgagcgtgc
     2461 caagcggttg tccgagcagc aggcgatctc caccgagacc gccgagcagc gtcgcgctgc
     2521 cgccgaccag tccggtgcgg ccgtgcaggc ggcgcaggct gcgctggacg cggcccgcct
     2581 caacctggag ttcaccaagg tgcgtgcccc gatcgacggc cgtgccggcc gcgcgatggt
     2641 caccgccggc aacctggtca ccgccggcga cagcgccagc gtactgacca cgctggtctc
     2701 gctggatacc gtgttcgtct acttcgatgc cgacgaaagc accttcctgc gttacgcaca
     2761 gatggcacgc aagggcgagc gcccgagcga gcgcgacagc gatctgccgg tgaaggtcgg
     2821 cctgtccggt gaagagggct acccgcattc gggcaaggtc gacttcctcg acaaccaggt
     2881 ggcccgcagc accggcacca tccgcgtccg tgcgctgctg gacaatgccg accgccagtt
     2941 cacgccgggc ctgttcgccc gcgtgcagct gctcggcagc ggccagttcc aggccatgct
     3001 gatcgatgac aaggccgtgc tgaccgacca ggaccgcaag tacgtctacg tggtcgacaa
     3061 ggatggcaag gcgcagcgcc gcgacatcca gctcggccgt accgccgaag gcctgcgcat
     3121 cgtcgagcac gggctggctg ccggtgacaa ggtgatcatc gacggcgtgc agaaggtgtt
     3181 tatgccgggc atgccggtgc aggccaaggc cgtggcgatg cagccacagg ccgcgccggc
     3241 accgggccgc gacgccaccg ccgcactgaa ccactgatcc gccgtctcct gattcgcgtt
     3301 tccgcttagc tgccggcgcc agcggcagcc ttccctgcct tcgtcatatc ggcgaggggc
     3361 agggcggctg ttgcccgccg acggcatttc ccaggaattc ctccatggac ttttcccgtt
     3421 tcttcatcga caggccgatc ttcgcggcgg tgctgtcgat cgtgatcttc gccgcaggcc
     3481 tgatcacgat tcccatcctg ccgatcagcg agtaccccga agtggtgccg ccgtcggtgg
     3541 tggtgcgcac ggtgtatccg ggcgccaacc ccaaggtcat tgccgagacc gtcgccacgc
     3601 cgcttgaaga ggcgatcaac ggcgtcgaag gcatgatgta cctgaagtcg gtcgccggct
     3661 ccgatggcgt gctgcagatg accgtcacct tccgcccggg caccgacccg gacgcggcgg
     3721 cggtgaaggt gcagaaccgc gtggcgcagg cgcaggcgcg cctgcccgag gacgtgcgcc
     3781 ggcagggcgt gaccacgcag aagcagtcgc cgaccttcct gatggtggtg cacctgacct
     3841 cgccgcaagg caagtacgac accctgtacc tgcgcaacta cgcacgcctg cacgtcaagg
     3901 atgcgctggc gcgtattccg ggcgtgggtg acgcgcagat cttcggtggc ggcgattacg
     3961 ccatgcgcgc ctggctggac ccggacaagg tggcttcgcg cggcctgacc gccagcgacg
     4021 tggtgcgcgc catgcgcgag cagaacgtgc aggtctcggc cggccagctc ggcgccgaac
     4081 cgctgccgaa cagccagttc ctgaccctga tcaacgccca gggccggctg aagaccgaaa
     4141 aggaattcgg cgacatcgtg ctcaagagcg gcgtcgatgg cgagatcgtg cgcctggccg
     4201 acgtggcccg cctggaactg ggtgccggcg actacacgct gcgctcgcag ctggacggca
     4261 agaacgcggt cggtatcggt atcttccagt cgccgggtgc caatgcactg gagatccgtg
     4321 accaggtcat ctcgacgatg gacgagatgc agaagaccat gccggccgac gtgaagtacg
     4381 aagcggtgta cgacaccacc attttcgtgc gcgactcgat caaggccgtg gtttccacgc
     4441 tgctggaagc catcgcgctg gtggtgctgg tggtgatcct gttcctgcag acctggcgtg
     4501 cctcgatcat cccgttgatc gcggtgccgg tgtcggtggt cggtaccttc gctgcgctgt
     4561 acctgctggg cttctcgatc aacacgctga gcctgttcgg gctggtgctg gcgatcggca
     4621 tcgtggtcga cgacgcgatc gt
//
LOCUS       DAOKIP010000460         4573 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.guided.265,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000460 DAOKIP010000000
VERSION     DAOKIP010000460.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 4573)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4573)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4573
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.guided.265"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(48..764)
                     /locus_tag="QEL58_004103"
     CDS             complement(48..764)
                     /locus_tag="QEL58_004103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HDS1678511.1"
                     /translation="MKLMVIGASRGLGRAFVEGLCGPGDTVVGVSRGRPRDLACPEGV
                     ELQWIEADLSRPTAAADHIAAQAPADIDVLIHNLGIWEDKAFSDEYAFLDESDAALAQ
                     LVDVNITATLMLLQRLLPRVLNAARPQLVLTGSTSALPRSGRPEVAFGASKFALNGIA
                     DALREGFRERRLAVTSLQLGYLNTDDALSVPVADAAARGEGGLVPVHDVVTMVRALLQ
                     LSPSGFVRELVLPAIADPRY"
     gene            949..1752
                     /locus_tag="QEL58_004104"
     CDS             949..1752
                     /locus_tag="QEL58_004104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005416290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="APH(3')-II family aminoglycoside
                     O-phosphotransferase"
                     /protein_id="HDS1678512.1"
                     /translation="MDETGSTPAEMPLPQAWQQDLAGARFERQSIGVSRADVARVHRP
                     GQADAFLKSEVIDAFSELGDEIARLRWLQAQGQPAPTVMATAEEAGRRWLLMSALPGR
                     DLATSADLPPQQVVAVLADALRGLHALPVATCPFDQRLASRLHAAQARVEAGVVDADD
                     FDNERLGQSAQQVFVELCASRPAYEDRVVCHGDACLPNLMVADDRFSGFIDCGRMGVA
                     DRYQDLALAARSLVHNFGDTRWVAPLFQRYGVIADERRLAFYRLLDEFF"
     gene            1835..2425
                     /locus_tag="QEL58_004105"
     CDS             1835..2425
                     /locus_tag="QEL58_004105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HDS1678513.1"
                     /translation="MSRFDRNEQRVALILQAALQCFLAKGFHQTSMRDIAQVAGVSLG
                     NLYNHFPGKEAIILAVAVAESEELAPMLQRLAAADGERAQVMAFLLDLHALCRQPQWA
                     TLAVEVLAESARTPAVAEAFAANRRQLQQALADALQRVAQRERRRPALAPPLQAQVLL
                     DAIESDALRRGLGEADETDGEPLDIGLLALLLGARA"
     gene            2422..3456
                     /locus_tag="QEL58_004106"
     CDS             2422..3456
                     /locus_tag="QEL58_004106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019661357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1624 domain-containing protein"
                     /protein_id="HDS1678514.1"
                     /translation="MSADDRRLHGLDLARYLALAGMVLVNFRLAMAVPAEGTGGLAGF
                     FHLLEGKASATFVTLAGLGLVLATQRQAWWPASVQTWRRALFLLVLGLLNLTLFPADI
                     LHYYAVYFALAVLWLRASPRVSLASIVGLAAGSFWALLQWDYSEGWNWQTLEYAGLWQ
                     WPGMARNLLFNGFHPLLPWLCFFLLGMLLARLPLSQPRVQRALLVLGLSLIAAGHGVQ
                     QLAQGTPWQPWLGTQPMPPGPAYVLTGAGAACSVIAACLWLARLRPGEWLAPFTAAGR
                     MTLTLYVGHILLGMGTLESLGLLDGRASLASVLLWALLFLLLATGAAWLWSWQLARGP
                     LEALMRRIAG"
     gene            3555..4559
                     /locus_tag="QEL58_004107"
     CDS             3555..4559
                     /locus_tag="QEL58_004107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008268462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoglycoside phosphotransferase family
                     protein"
                     /protein_id="HDS1678515.1"
                     /translation="MSFASAQHLGEVLQQSYGITATAVVPRPVGADASASVYRVDARR
                     GQWWLKCRTYQVDPAVWDSLHWLRGTLGIDEIVAPWPALTGGASVQRWGLQFTLFPYI
                     EGQSGFEAALSRTQWKRLGDVLRRLHAAQLPAELQQALPIVRLETAALETVGQWLVGE
                     GLAVAQDGLGRAFASVWDQQHARIAALHASALELHAALKDAPVDLHLCHTDLHAGNLL
                     MGNDGGLHLIDWDGLSLAPRERDLMFIGGAVGGRWGRENPLDFAAGYGNDLGDPRWIA
                     WYRHWRILQDLIEFQQVLLGSDGEERSPQLRRQSLHYLGEQFAPGNVFDAAERAYRAL
                     "
BASE COUNT          658 a         1425 c         1661 g          829 t
ORIGIN      
        1 cggccgcgcg cgcggccacc ggcgcctccc tgcgctggcc gccgtagtca gtagcgcggg
       61 tcggcgatgg ccggtagcac cagctcgcgc acgaagcctg agggtgacag ctgcagcagt
      121 gcacgcacca tggtcaccac gtcgtgcacg ggcaccagcc cgccttcgcc gcgcgctgcg
      181 gcgtcagcca ccggtaccga cagtgcatcg tcggtattga gatagcccag ctgcaggctg
      241 gtgaccgcca gacggcgctc gcggaagcct tcgcgcagcg catcggcgat gccgttgagc
      301 gcgaacttcg aagcgccgaa ggccacttcc gggcggccgc tgcgcggcag tgccgaggtc
      361 gaaccggtca gcaccagctg tggccgtgct gcattcaata cacggggcaa caggcgctgc
      421 agcagcatca gggtggcggt gatgttgacg tcgaccagct gcgcgagcgc ggcatcgctt
      481 tcatcgagaa atgcgtattc gtcgctgaag gccttgtctt cccagatgcc caggttgtgg
      541 atcagcacat cgatatcggc cggtgcctgc gctgcgatat ggtcggccgc tgcggtgggc
      601 cgggacaggt ctgcttcgat ccattgcagc tcgacgcctt cgggacaggc gaggtcgcgc
      661 gggcgaccgc gcgagacgcc gacgacggtg tcgcccgggc cgcacaggcc ttcgacgaat
      721 gcccgaccga ggcccctgct ggcgccgatg accatcaact tcatgttgct tccttgtatg
      781 cgggagttgc agcgaccgtc gcggcgccgg ccactgtgga cggctagcag tgattcgtcc
      841 atcgaaccac gcgttggcgt atgggcctgg ttcagcgcgg cgacgcagct gccggaagtg
      901 cgcgacaatc gccatcgtca ccgaccgacg ctggacctgc gcatgtgcat ggacgaaacc
      961 ggatccactc ctgccgagat gccgctgccg caggcctggc agcaggacct ggccggcgcg
     1021 cgttttgagc ggcagtcgat aggtgtctca cgcgcggatg ttgcccgcgt gcatcggccc
     1081 gggcaggccg atgcgttcct gaaatcggaa gtgatcgatg ccttcagcga actgggtgat
     1141 gagatcgcgc gcctgcgctg gttgcaggca cagggccagc ccgcaccgac ggtgatggcc
     1201 actgccgaag aggcgggtcg gcgttggttg ctgatgagtg cgctgccggg ccgcgacctg
     1261 gccacgtcag cggatctgcc accgcaacag gtggtggcgg tgttggccga cgcattgcgt
     1321 ggactgcatg ccttgcccgt ggcgacttgt ccgttcgacc agcggttggc atcgcgcctc
     1381 catgccgcgc aggcacgcgt cgaagccggt gtggtcgacg ccgacgactt cgacaacgaa
     1441 cgcctgggcc agagcgcgca acaggtcttt gtcgagcttt gcgcgagccg gccggcgtat
     1501 gaagaccggg tggtctgcca tggcgatgcc tgcctgccca acctgatggt ggccgacgac
     1561 cgcttcagcg gtttcatcga ttgcgggcgc atgggcgtgg ccgaccgcta ccaggacctg
     1621 gcattggccg cgcgcagcct cgtgcacaat tttggtgaca cgcgctgggt ggcaccgctg
     1681 ttccagcgtt acggcgtgat cgccgatgag cggcgtctgg cgttctatcg gttgctcgac
     1741 gagttcttct gacgcgagcg ggggctgaac gccggcctgc cggtggcttc gcgcgcactg
     1801 tgaaatggac gaacgttcgt tcactattcg tgccatgagc cgattcgacc gcaatgagca
     1861 gcgtgtggcc ctgatcctgc aggcggcgct gcagtgcttc ctggccaagg gcttccacca
     1921 gaccagcatg cgcgacatcg cgcaggtggc cggcgtcagc ctgggcaacc tctacaacca
     1981 ttttccgggc aaggaggcga tcatccttgc ggttgcggtg gccgagagcg aagaactggc
     2041 accgatgctt cagcggctgg cggccgccga cggcgagcgc gcgcaggtga tggcgttcct
     2101 gctggatctg catgcgctgt gccggcagcc gcagtgggcg acgcttgcgg ttgaggtgct
     2161 ggccgagagc gcacgcaccc ccgccgtggc cgaggcattc gcggccaatc gcaggcagct
     2221 gcaacaggct ctggccgatg ccctgcagcg cgtggcacag cgcgagcggc ggcgcccggc
     2281 gctggctccg ccactgcagg cgcaggtact gctggatgcc atcgaaagcg atgcattgcg
     2341 ccgggggctg ggcgaggccg atgagacgga tggtgagccg ctggatatcg ggctgctggc
     2401 gctgctgctg ggtgcgcgtg catgagcgcc gatgaccggc gcctgcacgg cctggacctg
     2461 gcacgctacc tcgcactggc cggcatggtg ctggtcaact tccgcctggc gatggccgtg
     2521 cccgcagagg gtacgggtgg gttggctggc ttcttccacc tgctggaagg caaggcctcg
     2581 gcgactttcg ttacgctggc cgggctgggc ctggtgctgg ctacgcagcg gcaggcgtgg
     2641 tggccggcca gcgtgcagac ctggcggcgc gcactgttcc tgctggtgct gggcctgctc
     2701 aatctgacgc tgttcccggc cgatatcctg cattactacg cggtgtactt cgcgctggcg
     2761 gtgctgtggc tgcgtgcgtc gccacgggtg tcgctggcca gcatcgtcgg cctggcagcc
     2821 ggctcgttct gggcgctgct gcagtgggac tacagcgaag gctggaactg gcagacgctg
     2881 gagtatgccg gcctgtggca gtggcccggt atggcgcgca atctgttgtt caacggcttc
     2941 catccgttgc tgccgtggct gtgcttcttc ctgctgggca tgctgctggc gcgcctgccg
     3001 ttgtcgcagc ctcgggtgca gcgcgcactg ctggtgctgg gcctgtcgct gatcgcggcc
     3061 gggcatggcg tgcagcagct ggcgcaggga acgccctggc agccgtggct gggaacgcag
     3121 ccgatgccgc cgggaccggc ctatgtgctg acgggtgcgg gagcggcctg cagtgtgatc
     3181 gcggcctgtc tgtggctggc gcgtctacgc ccgggcgagt ggttggcacc gttcactgcg
     3241 gccgggcgaa tgaccctgac cctgtacgtc gggcatatcc tgctgggcat gggcacgctg
     3301 gaaagcctgg gcctgctgga tggccgtgcc tcgctcgcct cggtgctgct gtgggcgctg
     3361 ctgttcctgc tgctggcgac cggcgcggcg tggctgtggt catggcagct cgcgcgcggt
     3421 cccctggaag cgctgatgcg ccgcatcgcc ggctaatcca tcgctcgcga cgcgcaaggg
     3481 tgtgacggac atgtctgtgt cgcagccaac gcatctgcga tagtagcggc aggtaattct
     3541 ttccgtttgc atccatgtca ttcgcttcgg cgcagcatct cggcgaagtc ctgcagcaat
     3601 cctatggcat caccgctacc gcagtggtgc cacgcccggt gggcgccgat gccagcgcca
     3661 gcgtgtaccg cgtggatgcg cggcgcgggc aatggtggtt gaagtgccgc acctaccagg
     3721 tcgatccagc ggtgtgggac agcctgcact ggttgcgcgg cacgctgggg atcgatgaaa
     3781 tcgtcgcgcc ctggccagca ttgacgggag gtgcgtcggt gcagcgctgg gggttgcagt
     3841 tcaccttgtt cccctacatc gaagggcagt ccggcttcga ggcggcgctg agccgcacgc
     3901 agtggaagcg gttgggcgac gtgctgcgac gcctgcacgc ggcgcagctg ccagcggagc
     3961 tgcagcaggc gttgcccatc gtgcggctgg aaaccgccgc actggaaacg gtgggacagt
     4021 ggctggtggg tgaagggctg gcggtagcgc aggatgggct gggccgcgca ttcgcttcgg
     4081 tctgggatca gcagcatgcg cgcatcgcgg cgctgcatgc gagcgcgctg gagctgcacg
     4141 ctgcattgaa ggatgcaccg gtcgatctgc acctgtgcca caccgacctg catgccggca
     4201 atctactgat ggggaatgat ggcggcctgc atctgatcga ttgggatggc ctgtcgctgg
     4261 cgccacgcga gcgcgacctg atgttcatcg gtggcgccgt gggtgggcgt tggggtcgcg
     4321 agaatccgct ggatttcgca gcaggctatg gcaacgacct gggagatccg cgctggatcg
     4381 cgtggtaccg gcactggcgc attctgcagg acctgatcga gttccagcag gtcctgctgg
     4441 gcagcgatgg cgaggagcgc tcgccgcagc tgcgccggca gtcgctgcat tacctgggcg
     4501 agcagtttgc tccgggtaat gtgttcgatg cggcggagcg ggcgtatcgg gcgctgtaaa
     4561 cgcacgtcac ccg
//
LOCUS       DAOKIP010000461         4103 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.guided.280,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000461 DAOKIP010000000
VERSION     DAOKIP010000461.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 4103)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4103)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4103
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.guided.280"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            <1..820
                     /locus_tag="QEL58_004108"
     CDS             <1..820
                     /locus_tag="QEL58_004108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014036827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HDS1678516.1"
                     /translation="AKRLSEQQAISTETAEQRRAAADQSGAAVQAAQAALDAARLNLE
                     FTKVRAPIDGRAGRAMVTAGNLVTAGDSASVLTTLVSLDTVFVYFDADESTFLRYAQM
                     ARKGERPSERDSDLPVKVGLSGEEGYPHSGKVDFLDNQVARSTGTIRVRALLDNADRQ
                     FTPGLFARVQLLGSGQFQAMLIDDKAVLTDQDRKYVYVVDKDGKAQRRDIQLGRTAEG
                     LRIVEHGLAAGDKVIIDGVQKVFMPGMPVQAKAVAMQPQAAPAPGRDATAALNH"
     gene            948..>4103
                     /locus_tag="QEL58_004109"
     CDS             948..>4103
                     /locus_tag="QEL58_004109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_021312368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit"
                     /protein_id="HDS1678517.1"
                     /translation="MDFSRFFIDRPIFAAVLSIVIFAAGLITIPILPISEYPEVVPPS
                     VVVRTVYPGANPKVIAETVATPLEEAINGVEGMMYLKSVAGSDGVLQMTVTFRPGTDP
                     DAAAVKVQNRVAQAQARLPEDVRRQGVTTQKQSPTFLMVVHLTSPQGKYDTLYLRNYA
                     RLHVKDALARIPGVGDAQIFGGGDYAMRAWLDPDKVASRGLTASDVVRAMREQNVQVS
                     AGQLGAEPLPNSQFLTLINAQGRLKTEKEFGDIVLKSGVDGEIVRLADVARLELGAGD
                     YTLRSQLDGKNAVGIGIFQSPGANALEIRDQVISTMDEMQKTMPADVKYEAVYDTTIF
                     VRDSIKAVVSTLLEAIALVVLVVILFLQTWRASIIPLIAVPVSVVGTFAALYLLGFSI
                     NTLSLFGLVLAIGIVVDDAIVVVENVERNIEEGLSPTAAAHQAMREVSGPIVAIALVL
                     CAVFVPMAFLSGVTGQFYKQFAVTIAISTVISAINSLTLSPALAARLLKAHGAPKDGP
                     SRLIDRLFGWVFRPFNRFFKSSSEKYERGVARILGRRGAVFVVYAILLVGTGVIFKLV
                     PPGFIPTQDKLYLIAGVKLPEGSSIARTDEMLRKVAKIAQETDGVAHTISFPGLNALQ
                     FTNTPNTGVAFIPLKPFAERHGRTAAQINAEINQKIAGLQEGFAFAMMPPPILGLGNG
                     NGYQMFIEDRGNLGYGALQNAVQAMQGTVAQTPGMAFPISSYQANVPQLDAEVDRVKA
                     KAQGVQLTELFDTLQTYLGSAYVNDFNQFGRTWQVIAQADGPFRETVEDIGKLRTRND
                     RGEMVPIGSMVTIKQTFGPDPVLRFNGYPAADLAGEADPRLLSSAEAMNKLTEIAGKV
                     LPVGMTTEWTDLSYQQATQGKAAFIVFPVAIMLAFLVLAALYESWSLPLAVILIVPMT
                     LLSALFGVWLTGGDNNVFVQVGLVVLMGLACKNAILIVEFARELEMGGKGIVEAALEA
                     CRLRLRPIVMTSIAFIAGTVPLVLSHGAGAEVRSVTGITVFAGMLGVTLFGLFLTPVF
                     YVALRKFVTRNGGGQLVQHGEP"
BASE COUNT          668 a         1359 c         1366 g          710 t
ORIGIN      
        1 tgccaagcgg ttgtccgagc agcaggcgat ctccaccgag accgccgagc agcgtcgcgc
       61 tgccgccgac cagtccggtg cggccgtgca ggcggcgcag gctgcgctgg acgcggcccg
      121 cctcaacctg gagttcacca aggtgcgtgc cccgatcgac ggccgtgccg gccgcgcgat
      181 ggtcaccgcc ggcaacctgg tcaccgccgg cgacagcgcc agcgtactga ccacgctggt
      241 ctcgctggat accgtgttcg tctacttcga tgccgacgaa agcaccttcc tgcgttacgc
      301 acagatggca cgcaagggcg agcgcccgag cgagcgcgac agcgatctgc cggtgaaggt
      361 cggcctgtcc ggtgaagagg gctacccgca ttcgggcaag gtcgacttcc tcgacaacca
      421 ggtggcccgc agcaccggca ccatccgcgt ccgtgcgctg ctggacaatg ccgaccgcca
      481 gttcacgccg ggcctgttcg cccgcgtgca gctgctcggc agcggccagt tccaggccat
      541 gctgatcgat gacaaggccg tgctgaccga ccaggaccgc aagtacgtct acgtggtcga
      601 caaggatggc aaggcgcagc gccgcgacat ccagctcggc cgtaccgccg aaggcctgcg
      661 catcgtcgag cacgggctgg ctgccggtga caaggtgatc atcgacggcg tgcagaaggt
      721 gtttatgccg ggcatgccgg tgcaggccaa ggccgtggcg atgcagccac aggccgcgcc
      781 ggcaccgggc cgcgacgcca ccgccgcact gaaccactga tccgccgtct cctgattcgc
      841 gtttccgctt agctgccggc gccagcggca gccttccctg ccttcgtcat atcggcgagg
      901 ggcagggcgg ctgttgcccg ccgacggcat ttcccaggaa ttcctccatg gacttttccc
      961 gtttcttcat cgacaggccg atcttcgcgg cggtgctgtc gatcgtgatc ttcgccgcag
     1021 gcctgatcac gattcccatc ctgccgatca gcgagtaccc cgaagtggtg ccgccgtcgg
     1081 tggtggtgcg cacggtgtat ccgggcgcca accccaaggt cattgccgag accgtcgcca
     1141 cgccgcttga agaggcgatc aacggcgtcg aaggcatgat gtacctgaag tcggtcgccg
     1201 gctccgatgg cgtgctgcag atgaccgtca ccttccgccc gggcaccgac ccggacgcgg
     1261 cggcggtgaa ggtgcagaac cgcgtggcgc aggcgcaggc gcgcctgccc gaggacgtgc
     1321 gccggcaggg cgtgaccacg cagaagcagt cgccgacctt cctgatggtg gtgcacctga
     1381 cctcgccgca aggcaagtac gacaccctgt acctgcgcaa ctacgcacgc ctgcacgtca
     1441 aggatgcgct ggcgcgtatt ccgggcgtgg gtgacgcgca gatcttcggt ggcggcgatt
     1501 acgccatgcg cgcctggctg gacccggaca aggtggcttc gcgcggcctg accgccagcg
     1561 acgtggtgcg cgccatgcgc gagcagaacg tgcaggtctc ggccggccag ctcggcgccg
     1621 aaccgctgcc gaacagccag ttcctgaccc tgatcaacgc ccagggccgg ctgaagaccg
     1681 aaaaggaatt cggcgacatc gtgctcaaga gcggcgtcga tggcgagatc gtgcgcctgg
     1741 ccgacgtggc ccgcctggaa ctgggtgccg gcgactacac gctgcgctcg cagctggacg
     1801 gcaagaacgc ggtcggtatc ggtatcttcc agtcgccggg tgccaatgca ctggagatcc
     1861 gtgaccaggt catctcgacg atggacgaga tgcagaagac catgccggcc gacgtgaagt
     1921 acgaagcggt gtacgacacc accattttcg tgcgcgactc gatcaaggcc gtggtttcca
     1981 cgctgctgga agccatcgcg ctggtggtgc tggtggtgat cctgttcctg cagacctggc
     2041 gtgcctcgat catcccgttg atcgcggtgc cggtgtcggt ggtcggtacc ttcgctgcgc
     2101 tgtacctgct gggcttctcg atcaacacgc tgagcctgtt cgggctggtg ctggcgatcg
     2161 gcatcgtggt cgacgacgcg atcgtggtgg tggagaacgt cgagcgcaac atcgaagaag
     2221 gcctgtcgcc cactgcggcg gcccaccagg ccatgcgtga agtgtccggc ccgatcgtgg
     2281 ccatcgcgct ggtgctgtgt gccgtgttcg tgccgatggc cttcctgtcc ggtgtcaccg
     2341 gccagttcta caagcagttc gcggtcacca tcgccatctc cacggtgatc tcggcgatca
     2401 actcgctgac cctgtcgccg gcgctggccg cgcgccttct gaaggcccac ggcgcgccga
     2461 aggacggccc gagccgcctg atcgaccgcc tgttcggctg ggtgttccgt ccgttcaacc
     2521 gcttcttcaa gtccagctcg gagaagtacg agcgtggcgt ggcccgcatc ctcggccgtc
     2581 gtggcgcggt gttcgtggtc tacgcgatcc tgctggtcgg taccggcgtg atcttcaagc
     2641 tggtaccgcc gggcttcatc ccgacccagg acaagctgta cctgatcgcc ggtgtgaagc
     2701 tgccggaagg ctcgtcgatc gcgcgcaccg atgaaatgct gcgcaaggtc gccaagatcg
     2761 cccaggaaac cgacggcgtg gcccacacca tttcgttccc gggcctgaac gcgctgcagt
     2821 tcaccaacac gccgaacacc ggtgtggcgt tcattccgct gaagccgttc gccgagcgtc
     2881 atggccgtac cgctgcgcag atcaatgccg agatcaacca gaagatcgcc ggcctgcagg
     2941 aaggcttcgc gttcgcgatg atgccgccgc cgatcctcgg cctgggcaac ggcaacggct
     3001 accagatgtt catcgaggac cgcggcaacc tgggttacgg tgcactgcag aatgccgtgc
     3061 aggcaatgca gggcaccgtt gcgcagaccc cgggcatggc cttcccgatt tccagctacc
     3121 aggccaacgt gccgcagctg gatgcggaag tggaccgcgt caaggccaag gcgcagggcg
     3181 tgcagctcac cgagctgttc gacaccctgc agacctacct gggttcggcc tatgtcaacg
     3241 acttcaacca gttcggccgt acctggcagg tgatcgcgca ggccgacggt ccgttccgcg
     3301 agacggtcga ggacatcggc aagctgcgta cccgcaatga ccgcggcgag atggtgccga
     3361 tcggttcgat ggtcaccatc aagcagacct tcggcccgga cccggtgctg cgcttcaatg
     3421 gctatccggc agcggacctg gccggtgaag ccgacccgcg cctgctgtcg tcggccgagg
     3481 cgatgaacaa gctgaccgag attgccggca aggtactgcc ggtgggcatg accaccgaat
     3541 ggaccgacct gagctaccag caggcgaccc agggcaaggc ggcgttcatc gtgttcccgg
     3601 tggcgatcat gctggccttc ctggtgctgg ccgcgctgta cgagagctgg tcgctgccgc
     3661 tggcggtgat cctgatcgtg ccgatgaccc tgctgtcggc gctgttcggc gtgtggctga
     3721 ccggcggtga caacaacgtg ttcgtgcagg tcggcctggt ggtgttgatg ggcctggcgt
     3781 gcaagaacgc gatcctgatc gtcgaattcg ccagagagct ggagatgggc ggcaagggca
     3841 tcgtcgaagc cgcgctggaa gcctgccgcc tgcgtctgcg cccgatcgtg atgacctcca
     3901 tcgcgttcat cgccggcacc gtgccgctgg tgctgtcgca cggtgcaggc gccgaagtgc
     3961 gctcggtgac cggtatcacc gtgttcgccg gcatgctggg cgtgaccctg ttcggcctgt
     4021 tcctcacccc ggtgttctac gtcgccctgc gcaagttcgt cacccgcaac ggcggtggcc
     4081 agctggtgca gcacggcgag ccg
//
LOCUS       DAOKIP010000462         3176 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.guided.323,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000462 DAOKIP010000000
VERSION     DAOKIP010000462.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 3176)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3176)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3176
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.guided.323"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            249..1634
                     /locus_tag="QEL58_004110"
     CDS             249..1634
                     /locus_tag="QEL58_004110"
                     /inference="COORDINATES: protein motif:HMM:NF019313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1678518.1"
                     /translation="MLARLIASSTDAPLVISLQSPWGSGKTVFLKRLALHMKGAKGIP
                     TVRIDAWKTDDCADPLVAIIAELSLHLEELRRKDESLSEKVDSCLSRLAKFGSKILLP
                     ATSIVADLHTPGSGDVLRSAGAFAERLLDMQKNRSTAEKDFRDALTEARCLVTGRGHD
                     RSPSPMLLMIDELDRCRPDHAIRMLERIKHYFDVPGISFLIASDRGNLPAAVRSVYGI
                     HVDGELYLRKFFDYEFHLRQPNPEIYSSHLVATCINPESKHVLPSEIQLPNGRDFEHA
                     VLAIQSDELGVRVLKGEYMDAFPQFAKTFSLTLRDQEQAVTMITAFIHTRESAMETIP
                     LVDCFLACLRFGHPASFKALVDGSRKILLMEAKDRDDVSQAMIQRLRLLPHWDALQLL
                     AGSAAVPDISSIDDEIDPPTLSERILENYRGPSRSRAKRLPLLFLAARLYGRQFDLFQ
                     YSTSFLRLGVN"
     gene            1751..2623
                     /gene="blaL1"
                     /locus_tag="QEL58_004111"
     CDS             1751..2623
                     /gene="blaL1"
                     /locus_tag="QEL58_004111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_032966056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L1 family subclass B3 metallo-beta-lactamase"
                     /protein_id="HDS1678519.1"
                     /translation="MRSSLLALTLAAALPVAHAVAAETPLPQLRAYTVDASWLQPMAP
                     LQIADHTWQIGTESLTALLVQTSEGAVLLDGGMPQMAGHLLDNLKERGVAPQDLRLIL
                     LSHAHADHAGPVAELKRRTGARVVANAESAVLLARGGSDDLHFGDDITYPPASTDRIV
                     MDGEVVTVGGIAFTAHFMPGHTPGSTAWTWTDTRDGKPVRIAYADSLSAPGYQLRGNV
                     RYPRLIEDYTRSFATVRGLPCDLLLTPHPGASHWDYAAGSKAGAKALTCKAYADEAEE
                     KFDAQLAKETVLAR"
     gene            complement(2721..3092)
                     /locus_tag="QEL58_004112"
     CDS             complement(2721..3092)
                     /locus_tag="QEL58_004112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017354981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF411 domain-containing protein"
                     /protein_id="HDS1678520.1"
                     /translation="MHKTASCGCCGIWVDHLKAEGFQVEVRDTDDMNPIKVRLGVPVG
                     KGSCHTAEIGGYVVEGHVPAEDIKRLLAERPAARGLVLPGMPAGSPGMEMPDGYVQPY
                     TVELVRTDGSIEAFAEHGQDG"
BASE COUNT          644 a          989 c          935 g          608 t
ORIGIN      
        1 ttcgaacccg agttacttct ccggccgtgg ccgggtgctg acgctgggct ggcagtaccg
       61 gtactgaggc ggcttgttcc agcgccttct cgggcgctgg aacaaacact cacagctagt
      121 actatcactt ctttagagaa agaagtgaga aatcagggat gacgctactt agaaaggctg
      181 cgggcccaag aatcagcgag tcggcacctt gggaagacga tccgttcgag cgggaagcag
      241 agggggaaat gcttgctcga ctgatcgcat ccagtacaga tgctccattg gtgatctctc
      301 tccagtcgcc atggggcagc gggaagacgg tttttctgaa gcgtctcgcc ttgcatatga
      361 agggtgcgaa aggaattcct acagttcgca tcgatgcgtg gaagaccgat gattgcgccg
      421 atccgcttgt agccatcatc gcggagcttt cactgcatct tgaagaactg aggaggaagg
      481 acgagtccct ctcagagaaa gtggatagtt gcctctcacg tcttgccaaa ttcggatcaa
      541 agatcctgct tccggcaact tcgattgtcg ccgatcttca tacgccagga agcggagacg
      601 tccttcgatc cgccggcgcc tttgcggagc ggctccttga catgcagaag aacaggagca
      661 ctgcagagaa ggacttcagg gatgcactga ctgaggcaag gtgcctggtt acgggccgag
      721 gccacgaccg tagcccgagc ccgatgctgc tgatgattga tgagctcgac cgctgccgtc
      781 cagatcatgc catcaggatg ctggaacgca tcaagcacta cttcgatgtt cccgggattt
      841 ccttcctcat tgcctccgat cgcggaaacc tacccgcggc agttcgatcg gtgtatggca
      901 tccacgtgga tggcgagctc taccttcgaa agttcttcga ctatgagttc catttgcgac
      961 aacccaatcc agagatctat tcctcgcatc tggtagccac gtgcatcaac cctgaatcaa
     1021 agcacgtatt gcccagcgaa attcaacttc caaatggccg cgactttgag catgcggtgc
     1081 tcgccattca atccgacgaa ctgggagtac gcgttctcaa gggcgagtat atggatgcat
     1141 tcccgcagtt tgcgaagacg ttctcactga cgcttcgtga ccaggagcaa gcagtcacga
     1201 tgatcacagc attcatccat acgcgcgaat cggcgatgga gactatcccg ctagtagact
     1261 gcttcctggc atgccttcgc ttcggacatc ccgcctcttt caaggcattg gtggatggct
     1321 cgcgaaaaat cctgctcatg gaggcaaagg atagggatga tgtcagtcag gccatgatcc
     1381 aacgattgcg tcttcttcca cattgggatg ccttgcagtt gcttgcaggg agcgcagcag
     1441 tccccgacat atcaagcatc gacgatgaaa ttgatcctcc cactctttca gagcggattc
     1501 tagagaacta cagaggacct agtcgttcga gagcgaagcg tttgccactc ctgttccttg
     1561 ctgcgaggct ctacggtcga cagttcgatc ttttccaata ctcgacctcc ttcctgaggc
     1621 tgggcgtcaa ctgactccgt ctgatgattc ggcgtgccat cggccagcta atgactccga
     1681 taagaagtat gcgattcagc caactggggc cccatgatag tttccaagct ccttcaagcg
     1741 gacctggacc atgcgctctt ccctgctcgc cctcaccctg gctgctgcac tgccggtcgc
     1801 ccacgcggtg gccgccgaaa caccgctgcc acagctgcgg gcatacaccg tggatgcgtc
     1861 ctggctgcag ccgatggcgc cgctgcagat tgccgaccac acctggcaga tcggcaccga
     1921 gagcctgacc gcgctgctgg tacagaccag cgaaggcgcg gtgctgctgg acggcggcat
     1981 gccacagatg gccggccacc tgctggacaa cctgaaggaa cgcggcgtgg caccgcagga
     2041 cctgcggctg atcctgctca gccatgcaca tgccgaccac gccggcccgg tggcggaact
     2101 gaagcgccgt accggagcgc gcgtggtagc caacgcagaa tcagcggtcc tgctggcgcg
     2161 cggcggcagt gatgacctgc acttcggaga tgacatcacc tatccgccgg ccagcaccga
     2221 ccgcatcgtc atggatggcg aggtggtcac cgtgggcggc atcgctttca ctgcgcactt
     2281 catgcccggg cacaccccgg gcagcacggc ctggacctgg accgacacgc gcgacggcaa
     2341 gccggtgcgc atcgcctacg ccgacagcct gagcgcgccg ggctaccagc tgcgtggcaa
     2401 cgtccgctat ccgcgtttga tcgaggacta cacgcgcagc ttcgccaccg tgcgcgggct
     2461 gccctgcgac ctgctgctga cgccacaccc gggcgccagc cactgggact atgccgccgg
     2521 cagcaaggca ggtgccaagg cactgacctg caaggcctac gcggatgagg ccgaagagaa
     2581 attcgacgca cagctggcca aggaaacggt cctggcccgt tgattccgta gagtcgagct
     2641 tgctcgactg aagcgaagaa cagtcgagca cagctcgact ctacaaagag caagccgagc
     2701 gtgggctcgg ctctacaagg tcagccatcc tgcccatgct cggcgaacgc ctcgatgctg
     2761 ccatcggtgc gcaccagctc gacggtatac ggctgcacgt agccatccgg catttccatg
     2821 cctggcgagc cggccggcat gcccggcagc accagaccgc gcgccgccgg gcgctcggcc
     2881 agcaggcgct tgatgtcctc ggcgggcacg tggccctcga ccacgtagcc gccgatttcg
     2941 gcagtatggc aggagccctt gcccactggc acacccagcc ggaccttgat cgggttcatg
     3001 tcatcggtat cgcgcacctc cacctggaag ccttcggcct tcagatggtc gacccagatg
     3061 ccgcagcatc cgcagctggc ggtcttgtgc acgacagcga tcggcagtgc gggatcgatc
     3121 gaggccgggc tggccttgat gggtgccgcc ggggcctgcc ctgcagacga cgccgc
//
LOCUS       DAOKIP010000463         3143 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.guided.324,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000463 DAOKIP010000000
VERSION     DAOKIP010000463.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 3143)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3143)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3143
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.guided.324"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            <1..342
                     /locus_tag="QEL58_004113"
     CDS             <1..342
                     /locus_tag="QEL58_004113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006363828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family secretion protein"
                     /protein_id="HDS1678521.1"
                     /translation="NPQRQLLPGMYVRARVPRGAPASALTVPQQAVLRSAGGQAYAWV
                     IAGDGKAVIRTLEVDGSVDRQWLVRHGLKAGERVVVEGQERLQEGEVVDVRDWQRPVA
                     SAGAMQAGSKG"
     gene            379..>3143
                     /locus_tag="QEL58_004114"
     CDS             379..>3143
                     /locus_tag="QEL58_004114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005416363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HDS1678522.1"
                     /translation="MARFFIDRPVFAWVLAIFIILAGVLAIPRLAVERYPAVAPPSVS
                     IYASYPGASPQTLNDAVVGLIERELSSVKHLLYFESSVDTSGEASITATFKPGTNPEL
                     AQVDVQNRIKAIEPRLPRSVRQNGLFVEAADSGFLMLVGLRSPDASVSEAALGDFMAR
                     NIIEELRRIDGVGRVQLFGAEQAMRVWLDPTRLTGYGLTMGDVAAAIEQQNLEISPGR
                     IGDSPGVPGQRITVPLSADGQLSTPEQFAAIVLRAGADGSRVVLGDVARVELGAQSYA
                     WGTREDGHPATAAGVQLRPGANAVRTAAAVRERMAELAPLLPRGVESSIPFDTAPFVK
                     ISIQKVVQTLLEAMLLVFAVMYLFLQNWRYTLIPALVAPIALLGTFAVMMALGFSINV
                     LTMFGMVLAIGIIVDDAIVVVEGVERIMAEEGLPPREATIKAMRELTGAVIGITLVLT
                     AVFIPMALASGSVGAIYRQFTVAMAVSILFSALLALSLTPALCATLLRPNSHGHHGRG
                     GLFGAFNRGFERMTGRYQRGVASVLQRSGRVMGVFAALVAALLLGLHWLPGAFLPEED
                     QGYFMTSIQLPAEATAERTLAVVEAYERHVASRPGIGSNQSILGYSFSGSGPSAALTY
                     TMLKDWGERAGATAAGEVAAAQKAMAAVAEGEVMSVMPPAIDSLGRSSGFSLALQART
                     GQSQAELRAALQQLLKLAEASRLLSEVHADGLPAGTSVRLDIDRAKAEAMGVGFEHIS
                     NTLSAAMGSQYVNDFPNKGRLQQVILQADAPHRMELEDVLKLYVRNSEGGMVALSELV
                     TPHWTEAPLQLQRYLGFPALNLSGAPASGVSTGQAMAEMERLARQLPSGFALQWTSQS
                     LQERESGAQAPWLLLLSMLVVFLVLAALYESWSIPLAVMLVVPLGLLGAVAAVLLRGM
                     PNDVFFKV"
BASE COUNT          447 a          990 c         1169 g          537 t
ORIGIN      
        1 aatccgcagc gccagctgct gccgggcatg tacgtgcgtg ccagggtgcc gcgtggcgcc
       61 ccggccagtg cattgaccgt gccgcagcag gcggtgctgc gcagcgcggg tggccaggcc
      121 tatgcctggg tgatcgcggg cgatggcaag gcggtgatcc gcacgctgga ggtcgacggc
      181 agcgttgatc gccagtggct ggtccggcac gggctgaagg ccggcgagcg ggtcgtggtc
      241 gagggccagg agcgcctgca ggaaggcgag gtggtcgatg tgcgcgactg gcagcggccg
      301 gtcgccagcg ccggtgcgat gcaggccggc agcaagggct gagcccttcc cgggccagtc
      361 tctccaggga aatccaacat ggcacgtttc ttcattgatc gcccggtgtt cgcctgggtg
      421 ctggcgatct tcatcatcct ggcgggcgta ctggcgattc cgcgcctggc cgtggagcgc
      481 tatccggccg ttgcgccgcc cagcgtcagc atctatgcca gctacccggg ggccagcccg
      541 cagacgctga acgacgcggt ggtcggcctg atcgagcgcg agctgtccag cgtcaagcac
      601 ctgctgtact tcgaatcgtc ggtggatacc tccggcgaag cctcgatcac cgccaccttc
      661 aagccgggga ccaacccgga gctggcgcag gtggatgtgc agaaccggat caaggcgatc
      721 gaaccccgcc tgccgcgcag cgtgcgccag aacggcctgt tcgtggaagc ggccgattcc
      781 ggcttcctga tgctggtcgg cctgcgctcg ccggatgcca gtgtcagtga ggcggcgctg
      841 ggtgacttca tggcgcgcaa catcatcgaa gagctgcgcc gcatcgatgg cgtcggccgc
      901 gtgcagctgt tcggtgccga gcaggccatg cgggtatggc tggacccgac ccggttgacc
      961 ggctatggct tgaccatggg cgatgtggcc gcggccatcg agcagcagaa cctggagatc
     1021 tcgccaggcc gcatcggcga ttcgccgggc gtccccggcc agcgcatcac cgtgccgctg
     1081 agtgccgatg gccagttgtc cacgccggaa cagttcgccg ccatcgtgct gcgcgcgggc
     1141 gccgacggtt cgcgggtcgt gctgggcgat gtcgcacgcg tggaactggg cgcacagagt
     1201 tatgcctggg gcacgcggga ggacggccac ccggcgacgg cggccggcgt gcagctgcgc
     1261 ccgggcgcga atgcagtgcg aaccgccgcc gcagtgcgcg agcgcatggc cgagctggcg
     1321 ccgctgctgc cgcgtggcgt ggagtcgagc attccgttcg acactgcgcc gttcgtcaag
     1381 atctcgatcc agaaggtggt gcagacgctg ctggaggcga tgctgctggt gttcgcggtg
     1441 atgtacctgt tcctgcagaa ttggcgctat acgctgattc cggcgctggt cgccccgatc
     1501 gcactgttgg gcaccttcgc ggtgatgatg gcgctcggct tctcgatcaa cgtgctgacc
     1561 atgttcggca tggtgctggc gatcggcatc atcgtcgacg atgcgatcgt ggtggtcgag
     1621 ggcgtggagc ggatcatggc cgaggagggc ctgccaccgc gcgaggccac catcaaggcg
     1681 atgcgcgagc tgaccggcgc ggtgatcggc atcaccctgg tactgaccgc ggtgttcatt
     1741 ccgatggcgt tggccagcgg ctcggtgggc gcgatctacc gccagttcac cgtggcgatg
     1801 gcggtgtcga tcctgttctc ggcgctgctg gcgctgagcc tgaccccggc gctgtgcgcg
     1861 accttgttgc gcccgaacag ccatggtcat cacggtcgtg gcgggctgtt cggcgccttc
     1921 aatcgcggct tcgagaggat gaccgggcgt taccagcgcg gcgtggcctc ggtgttgcag
     1981 cggagcgggc gggtgatggg cgtgttcgcc gcgctggtgg ccgcgttgct gctgggcctg
     2041 cactggctgc cgggtgcgtt cctgccggaa gaggaccagg gctatttcat gacctcgatc
     2101 cagctgcccg ccgaagccac ggccgagcgc accctggcgg tggtcgaagc ctacgaacgg
     2161 cacgtggcgt cgcgcccggg catcggctcc aaccagtcga tcctcggcta cagcttttcc
     2221 ggttcgggcc cgagcgcggc gctgacctac accatgctga aggactgggg cgagcgcgcc
     2281 ggtgccaccg cagccggtga ggtggcggct gcgcagaagg cgatggccgc cgtcgccgag
     2341 ggcgaggtga tgagcgtgat gccaccggca atcgacagcc tggggcgttc gtccggcttc
     2401 tcgctggccc tgcaggcgcg gaccgggcag agccaggccg agttgcgtgc agccctgcag
     2461 cagctgctga aactggccga ggccagccgg ctgctgtcgg aggtgcatgc cgatggcctg
     2521 ccggccggca ccagcgtgcg gctggacatc gaccgcgcca aggccgaggc gatgggcgtg
     2581 ggcttcgagc acatcagcaa cacgctgtcg gcagcgatgg gctcgcagta cgtcaacgat
     2641 ttccccaaca agggccggtt gcagcaggtg atcctgcagg ccgacgcacc gcaccggatg
     2701 gaactggagg acgtgctgaa gctgtacgtg cgcaacagcg aaggtggcat ggtggcgctg
     2761 tccgaactgg tcacgccgca ctggaccgag gcgccgctgc agctgcagcg ctatctcggt
     2821 ttcccggcgc tgaatctgtc cggcgcaccg gcatcgggcg tgtcgaccgg ccaggcgatg
     2881 gcggagatgg agcggctggc caggcagctg ccctccggct tcgccctgca gtggaccagc
     2941 caatcgctgc aggagcgcga atcgggcgca caggcaccgt ggctgctgct gttgtcgatg
     3001 ctggtggtgt tcctggtgct ggcggcgctg tacgagagct ggtcgatccc gttggcggtg
     3061 atgctggtgg tgccgctggg cctgctcggt gcggtcgcgg cggtgctgtt gcgcggcatg
     3121 cccaacgacg tgttcttcaa ggt
//
LOCUS       DAOKIP010000464         3034 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.guided.326,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000464 DAOKIP010000000
VERSION     DAOKIP010000464.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 3034)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3034)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3034
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.guided.326"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(53..310)
                     /locus_tag="QEL58_004115"
     CDS             complement(53..310)
                     /locus_tag="QEL58_004115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014647837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1678523.1"
                     /translation="MVITVKCSAAQWSLLDPAAGVAEAFSSGAAAFDAAVGRASAHHR
                     RTGQGSTVRVEALGNSVDAVHFEALPAAVAPVSGLHPAPVV"
     gene            707..991
                     /locus_tag="QEL58_004116"
     CDS             707..991
                     /locus_tag="QEL58_004116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012511684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1678524.1"
                     /translation="MKALLLIPALLVLSACANQHQVAASADAAASSPATPRVGADRDA
                     HGCIGSAGYQWCEHSQRCERPWELAQAQGLANTAEAIDAYCAKPASPARK"
     gene            1004..1237
                     /locus_tag="QEL58_004117"
     CDS             1004..1237
                     /locus_tag="QEL58_004117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012511685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1653 domain-containing protein"
                     /protein_id="HDS1678525.1"
                     /translation="MAELSPLPTLAPGRYRHFKGGEYQVIDIVRSSETLEPLVLYRAL
                     YGEGGLWVRPYPMFVEQVPGEHGPQPRFARIGD"
     gene            1319..1888
                     /locus_tag="QEL58_004118"
     CDS             1319..1888
                     /locus_tag="QEL58_004118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008266606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR family transcriptional regulator"
                     /protein_id="HDS1678526.1"
                     /translation="MSASSSRSRRKAPDSVRQSLLQATIDVIARQGLAAVTVQDIAQA
                     AGVSKGALFHHFASKQALVDAAIATLIAEFEAQVRGLMAGSAHHGCFSRAYVRANFDH
                     LLQQERVNDIGLTLGNMLEPALLAQWGAWLRRMLAEFPEEAANPRLYAARCVADGYWA
                     TAYGRPLDEEERINALAMAEQALKLCDPV"
     gene            1902..2234
                     /locus_tag="QEL58_004119"
     CDS             1902..2234
                     /locus_tag="QEL58_004119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001070439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="QacE family quaternary ammonium compound efflux
                     SMR transporter"
                     /protein_id="HDS1678527.1"
                     /translation="MNPYVYLAAAIVLEVIATSLLKASDGMSRLLPTLGALVGYGLCF
                     YLLSVTMKSIPTGIAYAIWSGIGIVLISVIGLVVFKQRLDAPALIGIGLICAGVLVIN
                     LFSRSSAH"
     gene            complement(2257..2430)
                     /locus_tag="QEL58_004120"
     CDS             complement(2257..2430)
                     /locus_tag="QEL58_004120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019182774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1328 domain-containing protein"
                     /protein_id="HDS1678528.1"
                     /translation="MIKWAIIFAIIGVIAGVLGFGGIAGAAVGIAKFLFWAGIIIAVV
                     LFLLGMTVAKKVS"
     gene            complement(2525..>3034)
                     /locus_tag="QEL58_004121"
     CDS             complement(2525..>3034)
                     /locus_tag="QEL58_004121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysE family translocator"
                     /protein_id="HDS1678529.1"
                     /translation="GCLLAMLLVLAASAAGLSALLHSSPMLFEGLRYLGVAYLAWLGL
                     KAWRDSGRPAPPVTVDAGLAVAPALGAWAVFRGGLLVGLSNPKLLLFAAAFLPQFVDP
                     SRGQALQYSVLVATFAGCELFWYVMYAAGGHGLRRWLAKPFARRWFERLVGSVFLAFA
                     VALLRFRPR"
BASE COUNT          531 a         1047 c          973 g          483 t
ORIGIN      
        1 ctgtggctgt gccgtttcat caaccaggca ctgcgcgatg aatcgactgg cgttacacca
       61 ctggcgcagg atgcagcccg ctgaccggcg cgacggcggc gggcagcgcc tcgaaatgca
      121 cggcgtccac gctgttgccc agcgcttcca cgcgcaccgt gctgccctgg ccagtgcgtc
      181 ggtggtgggc gctggcccgg ccaaccgcgg catcgaaggc ggcggcgccg ctgctgaagg
      241 cttcggccac gccggcggcg gggtccagca gcgaccactg tgcggcactg cacttgacgg
      301 taatgaccat gggaggctcc ttgtggggaa acggcgcagg ggcgcatgac cctctgctga
      361 tgacgtcacc gtagccagcc catcagcgcg gtcctatcag ataagtacga aaaagccgcg
      421 cccgggtgtc agaactccac gctcatcaca tccctgagcc tgtttagcct gttcattccg
      481 tgatccttgt cacggagtcg gttcagcttc acactaccgt cactaacagg ggccccttcc
      541 acatgcgcac cttcttctcg cagcagcgcg ggacgctgct caagttctat ttcggggcca
      601 gctatctggt gctgatcgaa gaactgatcc gcgccgccat gcattgagcg cttgctggca
      661 gcacggcgcc agcagaaact gttgctccaa ggtatggagt ttgccgatga aagcgcttct
      721 tctgattcca gcgctgctgg tactgtccgc gtgcgccaac cagcatcagg tggccgccag
      781 cgccgatgct gcggccagct cgccggccac gccgagggtc ggcgctgatc gcgacgccca
      841 cggctgcatc ggctcggctg gctaccagtg gtgcgaacac agccaacgct gcgagcggcc
      901 gtgggaactg gcacaggccc aggggttggc caataccgcc gaagcgatcg atgcctactg
      961 cgcgaagccg gccagtccgg cgcgcaagtg agccgcgcgc accatggctg agctcagtcc
     1021 gctgcccact ctcgcacccg gccgctaccg ccatttcaag ggcggcgagt accaagtgat
     1081 cgacatcgtc cgcagcagcg aaacgctgga accgctggtg ctgtatcgcg cgctctatgg
     1141 cgaaggtggg ctgtgggtgc gcccctaccc gatgttcgtc gagcaggtac ccggcgaaca
     1201 cggcccgcag ccgcgcttcg cgcgtatcgg cgattgaatc cgcattgccg gccacggccg
     1261 gcagtggctg cgccgggcct gcgctacaat cgtaccgtcc agtcggtttc ttcccgccat
     1321 gtccgcatct tcctcccgtt cgcgccgcaa ggcgcccgac agcgtgcgcc agtcgctgct
     1381 gcaggccacc atcgacgtga tcgcacggca gggactggcc gcagtgaccg tgcaggacat
     1441 cgcacaggcg gctggcgtca gcaagggcgc actgttccat cacttcgcca gcaagcaggc
     1501 gctggtcgat gccgccatcg ccacgctcat cgctgagttc gaagcgcagg tacgtggcct
     1561 gatggcaggc agtgcgcacc acggctgctt cagccgcgcc tatgtgcgcg ccaacttcga
     1621 ccacctgctg cagcaggaac gggtgaacga catcgggctg accctgggca acatgcttga
     1681 acctgcactg cttgcgcagt ggggcgcctg gctgcggcgc atgctggccg agttcccgga
     1741 ggaagccgcc aatccccgcc tgtatgcggc gcgctgtgtt gccgacggct actgggccac
     1801 cgcctacggc cggccgctgg acgaggaaga acgcatcaat gccctggcca tggccgagca
     1861 ggccctgaag ctgtgtgacc ctgtgtaagc cggagcctgc gatgaatccc tacgtctatc
     1921 tcgccgccgc gatcgtgctg gaagtgatcg ccacgtcgct gctcaaggcc tccgacggca
     1981 tgagccgact gctgcccacg ctcggtgcgc tggtcggcta cgggctgtgc ttctacctgc
     2041 tgtcggtgac catgaaatcg ataccgaccg gcatcgctta tgccatctgg tccggcatcg
     2101 gcatcgtgct gatctcggtg atcgggctgg tggtgttcaa gcagcgcctg gatgcgccgg
     2161 cactgatcgg catcgggctg atctgcgccg gcgtgctggt gatcaacctg ttctcgcgca
     2221 gcagcgcaca ctgagcacgc tgccgcgcgg cacgcgctag ctgaccttct tggccacggt
     2281 catgcccagc aggaacagca ccacggcgat gatgatgccg gcccagaaca ggaacttggc
     2341 gatgccgacc gccgcgccgg caatgccgcc gaagccgagc acgcctgcga tgacgccgat
     2401 gatggcgaag atgatggccc acttgatcat gtcaaacctt tccccgcggg gactgcgtac
     2461 tggatgatca ggctaggccg tggccgatgc ggcactcgtg aacaggccgc gtgcgcggcg
     2521 tgaatcagcg cgggcggaaa cgcagcaggg ccaccgcgaa cgccaggaac acgctgccca
     2581 ccagccgctc gaaccagcgc cgtgcaaacg gctttgccag ccagcggcgc aggccatggc
     2641 cgccggctgc atacatcacg taccagaaca gctcgcagcc ggcgaaggta gccaccagca
     2701 cgctgtactg cagcgcctgg ccgcgcgagg ggtcgacgaa ctgcggcagg aacgccgccg
     2761 cgaacagcaa cagcttggga ttgctcaggc cgaccagaag tcccccgcgg aacactgccc
     2821 atgcgccaag tgccggcgcg accgccagcc ctgcatccac ggtcaccggc ggcgccgggc
     2881 ggccgctgtc acgccatgcc ttcagcccca gccaggccag gtaggccacg cccaggtaac
     2941 gcagcccttc gaacagcatc ggcgaggaat gcagcagcgc gctcaagccc gccgcggacg
     3001 cggccagcac cagcagcatc gccagcaggc agcc
//
LOCUS       DAOKIP010000465         2006 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.guided.364,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000465 DAOKIP010000000
VERSION     DAOKIP010000465.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 2006)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2006)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2006
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.guided.364"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(42..908)
                     /gene="ampR"
                     /locus_tag="QEL58_004122"
     CDS             complement(42..908)
                     /gene="ampR"
                     /locus_tag="QEL58_004122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_049465574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator AmpR"
                     /protein_id="HDS1678530.1"
                     /translation="MLHPTLPLNALRAFEAAARHQNFTRAALELCVSQAALSHQIRGL
                     EDRLGIRLFHRLPRGVALTDEGAALYPVLNESFERISASIARYTGGPAREVLTLGVVG
                     TFATGWLLPRLAAFESAHPDIELRLQTHNNRIDLAGEGLDLAIRFGDGDWQGQACTAI
                     LEAPFAPLCAPALARRLKQPRDLATLPLLRSYRGDEWPRWLQAAGVSGVEARGPVFDS
                     SLTVAMAAAGGAGVALLPLRMFEQELAEGRLLQPFATTLELGRYWLTRLRSRAEREPA
                     RRFREWLQAQGA"
     gene            1084..1995
                     /gene="blaL2"
                     /locus_tag="QEL58_004123"
     CDS             1084..1995
                     /gene="blaL2"
                     /locus_tag="QEL58_004123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005410766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L2 family class A beta-lactamase"
                     /protein_id="HDS1678531.1"
                     /translation="MLARRRFLQFSGIAVASSLALPLLARAAGAPTRVAPTEAAITAA
                     TDFAALEKACAGRLGVSLLDTASGRRVGHRQDERFPMCSTFKSMLAATVLSQAERAPA
                     LLDRRVPVRDADLLSHAPVTRRHAGKDMTVRDLCRATIITSDNTAANLLFGVVGGPPA
                     VTAFLRASGDTVSRSDRLEPELNSFAEGDPRDTTTPAAMAMTLQRVVLGEVLRPASRQ
                     QLADWLIDNETGDECLRAGLGKRWRVGDKTGSNGEDARNDIAVLWPVAGGAPWVLTAY
                     LQAGAISYEQRAMVLAQVGRIADRLIG"
BASE COUNT          314 a          688 c          681 g          323 t
ORIGIN      
        1 tttgtgccac aaacgactta atcccctccg tccccttttt gttatgcgcc ctgcgcctgc
       61 aaccattcgc ggaagcgcct ggccggctca cgctcggcac gcgagcgcag tcgggtcagc
      121 cagtagcggc ccagctccag cgtggtggcg aacggctgca gcagccggcc ttcggccagt
      181 tcctgctcga acatgcgcag cggcagcagg gccacgcccg cgcccccggc ggcagccatc
      241 gccacggtca gtgacgaatc gaacaccggc ccgcgtgctt ccacgccact gaccccggcc
      301 gcctgcagcc agcgcggcca ctcgtcgccg cggtaagagc gcagcaacgg cagcgtggcg
      361 aggtcgcgcg gttgcttcag ccgtcgtgcc agtgccggtg cgcacagtgg cgcgaacggc
      421 gcctccagga tcgcggtgca cgcctggccc tgccagtcgc catcaccgaa gcggatcgcc
      481 aggtccagcc cttcgccggc caggtcgatg cggttgttgt gggtctgcag gcgcagctcg
      541 atgtccggat gcgcgctctc gaacgcagcc agtcgtggca gcagccagcc agtggcaaag
      601 gtgccgacca cgcccagcgt cagtacttcg cgcgccggtc cgccggtgta gcgcgcgatg
      661 ctggccgaga tgcgctcgaa cgattcgttg agcacgggat acagcgccgc cccctcatcg
      721 gtcagtgcga cgccacgcgg caggcgatgg aacagccgga tgccgagccg atcctccagg
      781 ccacggatct gatggctcaa cgccgcctgg ctgacgcaca gctccagtgc ggcacgggtg
      841 aagttctggt ggcgggcggc ggcttcgaag gcgcgcagcg cattcagcgg cagggtgggg
      901 tgcagcattg cgaagtcgtg agctggggtg atggctgatc ctaacgcctc accggattat
      961 tccgtaaaat taatgagttg aatgaggttg gcatgaattc atctcatgcc aggcgctgat
     1021 tcttttcgtt ggtcgcacct ctgcgtggcg tcaataatcg tgtggtcccc aggagaactc
     1081 cgcatgctcg cccgccgccg attcctgcag ttcagtggta ttgccgttgc ttcctcgctt
     1141 gccctgccgt tgctggcacg tgcggcagga gcgccgaccc gcgtcgcccc gaccgaggct
     1201 gcgatcaccg cggccaccga tttcgccgca cttgagaagg cctgtgccgg ccgccttggc
     1261 gtgagcctgc tcgatactgc cagcgggcgc cgcgtcggcc atcgccagga cgagcgcttc
     1321 ccgatgtgca gcaccttcaa gagcatgctg gccgccaccg tgctcagcca ggccgagcgc
     1381 gcgcccgcgc tgctcgaccg gcgcgtgccg gtacgcgacg ccgacctgct ttcgcatgcg
     1441 ccggtcaccc gccgccacgc cggcaaggac atgacggtgc gcgatctgtg ccgtgccacg
     1501 atcatcacca gcgacaacac cgccgccaac ctgttgttcg gcgtagtggg cgggccacct
     1561 gcggtcaccg ccttcctgcg cgccagtggc gatacggtca gccgcagcga tcggctggag
     1621 ccggaactga acagcttcgc cgaaggcgat ccgcgcgaca ccaccacgcc cgcggcgatg
     1681 gccatgacgt tgcagcgggt ggtgctgggc gaggtgctgc ggccggcctc gcggcagcag
     1741 ctggccgatt ggctgatcga caacgaaacc ggcgacgaat gcctgcgcgc gggccttggc
     1801 aagcgctggc gggtgggcga caagaccggc agcaatggcg aggacgcgcg caatgacatc
     1861 gccgtgctat ggccggtggc gggcggcgcg ccctgggtgc tcaccgccta tctgcaggcc
     1921 ggtgcgatca gctacgaaca gcgggccatg gtgctggcac aggtcgggcg gatcgccgat
     1981 cggctgatcg gttgaggtaa ccgggg
//
LOCUS       DAOKIP010000466         1578 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.guided.381,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000466 DAOKIP010000000
VERSION     DAOKIP010000466.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 1578)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1578)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1578
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.guided.381"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(53..391)
                     /locus_tag="QEL58_004124"
     CDS             complement(53..391)
                     /locus_tag="QEL58_004124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019185257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-II family nitrogen regulator"
                     /protein_id="HDS1678532.1"
                     /translation="MKMVMAVIKPFKLDDVREALAERGVTGITVTEVKGFGRQKGHTE
                     LYRGAEYVVDFLPKVKLEVAVTDDQVEAVVEAIVKAAGTGKIGDGKVFVYDLGSVVRI
                     RTGELDADAL"
     gene            546..797
                     /locus_tag="QEL58_004125"
     CDS             546..797
                     /locus_tag="QEL58_004125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005411375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="accessory factor UbiK family protein"
                     /protein_id="HDS1678533.1"
                     /translation="MIDLNHIDDLARRLSDLVPPGLRESREELQATFKSALQAGLAKL
                     DLVTREEFEVQRAVLLKTREKLDALETAVRELEGRSAAE"
     gene            923..1357
                     /gene="arr"
                     /locus_tag="QEL58_004126"
     CDS             923..1357
                     /gene="arr"
                     /locus_tag="QEL58_004126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012512354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+)--rifampin ADP-ribosyltransferase"
                     /protein_id="HDS1678534.1"
                     /translation="MAQDTEWTPVSHDTCDQVAGPFYHGTRADLAVGELLSAGFRSNY
                     RDSVVMNHIYFTTIAKGAGLAAEMARGEGRPRVYVVEPTGPFEDDPNVTNKKFPGNPT
                     RSYRSAQPLRIVGEITEWELYDAEFVRQLRAFVASGSGEIIN"
BASE COUNT          305 a          518 c          483 g          272 t
ORIGIN      
        1 aagctcgact ctacaaaagc cgctttacag cccgaatacg cacaaaacca ggttacaacg
       61 cgtccgcgtc caactcaccg gtacgaatac gcaccacgct gcccaggtcg tagacgaaca
      121 ccttgccgtc accaatcttg ccggtgcccg cagctttcac gatggcctca accaccgcct
      181 ccacctggtc atcggtcacc gccacttcca gcttcacctt cggcaggaag tcgaccacgt
      241 actccgcacc acggtacagc tcggtatggc ccttctggcg accaaagccc ttcacttccg
      301 tcaccgtgat cccggtgacc ccacgctcgg ccagcgcttc gcgcacgtcg tcgagcttga
      361 acggcttgat caccgccatg accatcttca tcgtctatct cctgtcttcc ggcgtggagg
      421 atagcgcctg aacgcggccc gtgcgaagcc gctgcggcct gtccgggcag cgggtgccgg
      481 cagtatcctt gtgccgattg gcctgcccgc gccggatgca cgggcccacc cccacggagc
      541 cccccatgat cgacctgaac cacatcgatg acctcgcccg tcgcctcagc gacctggtgc
      601 cgccgggcct gcgcgaatcg cgcgaggaac tgcaggccac cttcaagagc gcgctgcagg
      661 ccggcctggc caagctcgac ctggtcaccc gcgaggagtt cgaagtgcag cgcgcggtgc
      721 tgctgaagac ccgcgagaag ctggatgcgc tggaaacggc cgtgcgcgag ctggaagggc
      781 gcagcgccgc agaatgaaaa aaggaggcgc actgcgcctc ccactacaga gtatttcgcg
      841 gatggggcct tgccgcaagg cccaccgtgc gccctagact cgccggcctg tcgatccggc
      901 aggacacgca ggggcagtgc tgatggcaca ggacaccgaa tggacacccg tttcgcatga
      961 cacctgcgac caggtcgccg ggccgttcta tcacggcacc cgcgctgacc tcgcggtggg
     1021 cgagctgctg agcgcgggct tccgctccaa ctatcgcgac agtgtggtga tgaaccacat
     1081 ctacttcacc acgattgcca agggcgccgg gttggctgcg gagatggccc gcggcgaagg
     1141 gcggccgcgc gtgtatgtgg tggagccgac cgggccgttt gaggacgacc cgaacgtgac
     1201 caacaagaag tttcccggga acccgacgcg ttcgtatcgc agtgcgcagc cgttgcggat
     1261 tgtgggggag attacggaat gggagctcta cgacgcggag ttcgttcggc agttgagggc
     1321 gtttgttgct tcggggagtg gggagatcat caattgatga aaggagagac ctgtgctttg
     1381 gctgacggaa ggtcaatgca gaaggtcgtc gaacgatgtc cgctttcggc cagtagcgga
     1441 catgcgtaaa cgtcatgaga tgaaccgcaa agtggcctta gatcgagaga acgcccaagc
     1501 tcaaccagta agcgtccccc tcgtgcgaga cagccttgct gtgccagtgt ttgccccccc
     1561 tcaaggcttc gtagcgcc
//
LOCUS       DAOKIP010000467         1190 bp    DNA     linear   BCT 17-APR-2023
DEFINITION  TPA_asm: Stenotrophomonas maltophilia strain Stenotrophomonas
            maltophilia isolate 1D-1299 SAMEA6657584-rid14814353.guided.411,
            whole genome shotgun sequence.
ACCESSION   DAOKIP010000467 DAOKIP010000000
VERSION     DAOKIP010000467.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6657584
            Sequence Read Archive: ERR4014642
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales;
            Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia
            group.
REFERENCE   1  (bases 1 to 1190)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1190)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 07-JUL-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001354476.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001354476.1
            Genome Coverage       :: 65x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 07/08/2022 00:40:57
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,128
            CDSs (total)                      :: 4,042
            Genes (coding)                    :: 4,006
            CDSs (with protein)               :: 4,006
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 4, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 4, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 7 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1190
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6657584-rid14814353.guided.411"
                     /strain="Stenotrophomonas maltophilia"
                     /isolate="1D-1299"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /country="Denmark"
                     /collection_date="2018"
                     /collected_by="DTU"
     gene            complement(<1..212)
                     /locus_tag="QEL58_004127"
     CDS             complement(<1..212)
                     /locus_tag="QEL58_004127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016901749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDS1678535.1"
                     /translation="MFSKDLEHTIGQCYKRAREARHEFMTVEHLLLALLDNPSAQAVL
                     KACGADAERLRQELEQAIEASVSRLA"
     gene            351..1163
                     /locus_tag="QEL58_004128"
     CDS             351..1163
                     /locus_tag="QEL58_004128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="APH(6) family putative aminoglycoside
                     O-phosphotransferase"
                     /protein_id="HDS1678536.1"
                     /translation="MSEPYLSRWRLRRDGASIKTPHAQLWPVLTAAGEPAMLKVSSET
                     EEQNSHRLLRWWDGDGAARLLAHEGPAILIERARGDSLRQRSIDGDDDACTTILCQVL
                     QQLHRPRSAPPAELVCLRTWFADLLQPRAALPPLLEQCRSMAEELLQDEQEIRPLHGD
                     LHHDNVLDFGPRGWLAIDPKRLLGDRAFDYTTLFSNPDLCGPGIHVATRPERFAARLE
                     QVNTLAGLERARLLRWIAASMGLSAVWFRDDGDPADVDEAVARMALEALAEG"
BASE COUNT          200 a          382 c          412 g          196 t
ORIGIN      
        1 tcggccaggc gcgacacaga ggcctcgatg gcctgctcca gttcctggcg caggcgttcg
       61 gcgtcggccc cacaggcctt cagaacggcc tgggcggacg ggttgtcgag cagtgccaac
      121 agcaggtgtt cgaccgtcat gaactcatgc cgggcctcac gggcgcgctt gtagcactgg
      181 ccgatggtgt gttcgaggtc tttgctgaac atggattact ccggcggcag atggggacaa
      241 tatgcggcct gactacgcgt tttccatcac cctagcggat tgctgcgttc agatggcgtt
      301 agcagtagac attgcttgat cttcattcac tccaggacag cccgcccagc atgagcgaac
      361 cctacctgag ccgctggcga ttgcggcgtg atggcgcatc catcaagacg ccccatgccc
      421 agctctggcc ggtgctgacc gccgccggcg agccggcgat gctgaaggtc agcagcgaaa
      481 ccgaggagca gaacagccat cgcctgctgc gctggtggga cggtgacggc gccgcccgcc
      541 tgctggccca cgaggggccg gcgatcctga tcgaacgcgc acgcggcgac tcgctgcggc
      601 aacgctcgat cgacggcgac gatgacgcct gcaccacgat cctgtgccag gtcctgcagc
      661 agctgcaccg gccgcggagc gcgccgccag cggaactggt ctgcctgcgt acatggttcg
      721 ccgacctgct gcagccaagg gctgcgctac cgccattatt ggaacagtgc aggtcaatgg
      781 cggaggagct gctgcaggac gaacaggaga tccggcccct gcacggtgac ctgcaccacg
      841 acaacgtgct ggatttcggc ccgcgcggct ggctggcgat cgacccgaag cggctgttgg
      901 gcgaccgtgc ctttgattac acgacactgt tcagcaaccc ggacctgtgc ggcccgggta
      961 tccatgtggc cacgcgcccg gagcggtttg ccgcgcggct ggaacaggtg aacacgctgg
     1021 ccggcctgga acgggcgcgc ctgctgcgct ggatcgcagc cagcatgggg ctgtcggcgg
     1081 tatggttccg cgatgacggc gaccccgcgg acgtggacga ggcagtggcg cggatggcgc
     1141 tggaggcact ggcggaaggg tgaaccgcgc ttggcaggtt cccaccctgg
//
